BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (518 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P76446 Protein rtn n=101 Tax=Enterobacteriaceae RepID=R... 1071 0.0 UniRef50_C9XWJ5 Protein rtn n=9 Tax=Enterobacteriaceae RepID=C9X... 588 e-166 UniRef50_A8GGV3 Diguanylate phosphodiesterase n=11 Tax=Enterobac... 483 e-135 UniRef50_B2VIJ7 Rtn protein n=9 Tax=Enterobacteriaceae RepID=B2V... 457 e-127 UniRef50_A4TND3 Membrane protein n=16 Tax=Enterobacteriaceae Rep... 427 e-118 UniRef50_A0KNV8 Rtn protein n=9 Tax=Gammaproteobacteria RepID=A0... 236 2e-60 UniRef50_A8GFM2 EAL domain protein n=2 Tax=Serratia RepID=A8GFM2... 235 3e-60 UniRef50_C6UPQ0 Predicted protein n=10 Tax=Enterobacteriaceae Re... 231 5e-59 UniRef50_D0GSB3 Rtn protein n=6 Tax=Vibrio RepID=D0GSB3_VIBMI 229 2e-58 UniRef50_C6C3R8 Diguanylate phosphodiesterase n=1 Tax=Dickeya da... 227 8e-58 UniRef50_P76261 Uncharacterized protein yoaD n=124 Tax=Enterobac... 226 1e-57 UniRef50_A0KT96 EAL domain protein n=9 Tax=Shewanella RepID=A0KT... 223 1e-56 UniRef50_C6DJC0 EAL domain protein n=4 Tax=Pectobacterium RepID=... 223 2e-56 UniRef50_A6V3S1 Aminoglycoside response regulator n=3 Tax=Proteo... 220 1e-55 UniRef50_A6AJG8 Rtn protein n=1 Tax=Vibrio harveyi HY01 RepID=A6... 214 7e-54 UniRef50_C6CFE9 Diguanylate phosphodiesterase n=2 Tax=Dickeya Re... 214 9e-54 UniRef50_C1HI32 Rtn protein n=6 Tax=Escherichia RepID=C1HI32_9ESCH 213 2e-53 UniRef50_B2VJL5 Putative uncharacterized protein rtn n=1 Tax=Erw... 211 4e-53 UniRef50_D2TJN3 Putative exported protein n=1 Tax=Citrobacter ro... 209 3e-52 UniRef50_C8QG51 EAL domain protein n=3 Tax=Enterobacteriaceae Re... 208 4e-52 UniRef50_A4SI84 EAL domain protein n=3 Tax=Gammaproteobacteria R... 208 5e-52 UniRef50_Q7P1U8 Putative uncharacterized protein n=1 Tax=Chromob... 206 1e-51 UniRef50_C9NZP3 Rtn protein n=1 Tax=Vibrio coralliilyticus ATCC ... 204 5e-51 UniRef50_UPI00016A4C59 diguanylate phosphodiesterase n=1 Tax=Bur... 204 6e-51 UniRef50_A5W2V7 Diguanylate phosphodiesterase n=16 Tax=Pseudomon... 199 1e-49 UniRef50_D0Z7I3 EAL domain protein n=1 Tax=Edwardsiella tarda EI... 199 2e-49 UniRef50_C5BG29 Cyclic diguanylate phosphodiesterase (EAL) n=2 T... 199 2e-49 UniRef50_Q1VEI6 Putative uncharacterized protein n=1 Tax=Vibrio ... 198 3e-49 UniRef50_A6AP35 Protein rtn n=4 Tax=Vibrionales RepID=A6AP35_VIBHA 196 2e-48 UniRef50_A0KH05 EAL domain protein n=1 Tax=Aeromonas hydrophila ... 194 8e-48 UniRef50_C9PEG9 Rtn protein n=1 Tax=Vibrio furnissii CIP 102972 ... 192 2e-47 UniRef50_B4T8H8 Cyclic diguanylate phosphodiesterase (EAL) domai... 191 8e-47 UniRef50_Q2L0M3 Putative signaling protein (Fragment) n=1 Tax=Bo... 187 9e-46 UniRef50_A9AQW1 Diguanylate phosphodiesterase n=16 Tax=Burkholde... 186 2e-45 UniRef50_Q7BQS9 Sea19 n=1 Tax=Serratia entomophila RepID=Q7BQS9_... 182 2e-44 UniRef50_B9Z2J3 Diguanylate phosphodiesterase n=1 Tax=Lutiella n... 182 2e-44 UniRef50_Q1Z832 Putative uncharacterized protein n=1 Tax=Photoba... 181 4e-44 UniRef50_Q31S15 EAL n=2 Tax=Synechococcus elongatus RepID=Q31S15... 181 5e-44 UniRef50_B2JUW5 Diguanylate phosphodiesterase n=1 Tax=Burkholder... 180 9e-44 UniRef50_A6AUF8 Cyclic diguanylate phosphodiesterase (EAL) domai... 179 2e-43 UniRef50_P75995 Uncharacterized protein ycgG n=33 Tax=Enterobact... 179 2e-43 UniRef50_C9PD80 Rtn protein n=2 Tax=Vibrio RepID=C9PD80_VIBFU 178 5e-43 UniRef50_Q5ZVH1 Rtn protein n=5 Tax=Legionella RepID=Q5ZVH1_LEGPH 178 5e-43 UniRef50_D1RIS6 Cyclic diguanylate phosphodiesterase (EAL) domai... 177 8e-43 UniRef50_B1XXA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 177 1e-42 UniRef50_A6Q5V4 Putative uncharacterized protein n=1 Tax=Nitrati... 177 1e-42 UniRef50_Q7W9Y7 Putative membrane protein n=2 Tax=Bordetella Rep... 174 6e-42 UniRef50_UPI0001826354 diguanylate phosphodiesterase n=1 Tax=Ent... 173 2e-41 UniRef50_B8KTI7 EAL domain protein n=2 Tax=Gammaproteobacteria R... 172 2e-41 UniRef50_B5XY29 Cyclic diguanylate phosphodiesterase (EAL) domai... 172 3e-41 UniRef50_UPI000182647F hypothetical protein EcanA3_13737 n=1 Tax... 172 3e-41 UniRef50_D0YY24 Putative uncharacterized protein n=1 Tax=Photoba... 172 4e-41 UniRef50_B4SIA4 EAL domain protein n=4 Tax=Proteobacteria RepID=... 172 4e-41 UniRef50_B9QX90 Cyclic diguanylate phosphodiesterase domain prot... 172 4e-41 UniRef50_A9ME91 EAL n=35 Tax=Brucella RepID=A9ME91_BRUC2 171 4e-41 UniRef50_B4B5G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 171 6e-41 UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/P... 171 6e-41 UniRef50_Q47AF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 171 6e-41 UniRef50_C6QP03 Diguanylate cyclase/phosphodiesterase with PAS/P... 170 1e-40 UniRef50_A0NTL0 Putative uncharacterized protein n=1 Tax=Labrenz... 170 1e-40 UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pe... 170 1e-40 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 169 2e-40 UniRef50_B1MA59 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 169 3e-40 UniRef50_B5ED91 Diguanylate cyclase/phosphodiesterase n=3 Tax=Ge... 168 4e-40 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 168 5e-40 UniRef50_A7K1R0 Rtn protein n=3 Tax=Vibrio RepID=A7K1R0_VIBSE 168 5e-40 UniRef50_P21514 Cyclic di-GMP phosphodiesterase yahA n=51 Tax=Es... 167 8e-40 UniRef50_P74400 Sll0267 protein n=3 Tax=Bacteria RepID=P74400_SYNY3 167 8e-40 UniRef50_Q2BIC8 Sensory box/GGDEF family protein n=1 Tax=Neptuni... 167 9e-40 UniRef50_B7GKR7 Multidomain signal transduction protein (Contain... 167 1e-39 UniRef50_Q8DL70 Tll0627 protein n=2 Tax=Chroococcales RepID=Q8DL... 167 1e-39 UniRef50_Q2BQ91 Multisensor diguanylate cyclase/phophodiesterase... 166 2e-39 UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Maripro... 166 2e-39 UniRef50_A6WTB4 Diguanylate cyclase/phosphodiesterase with PAS/P... 166 2e-39 UniRef50_B1HUB1 Putative uncharacterized protein n=2 Tax=Bacilla... 165 4e-39 UniRef50_A5KWC7 PAS:GGDEF n=3 Tax=Gammaproteobacteria RepID=A5KW... 165 4e-39 UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 164 5e-39 UniRef50_Q0A7B5 Diguanylate cyclase/phosphodiesterase with PAS/P... 164 7e-39 UniRef50_C6PSS6 Diguanylate cyclase/phosphodiesterase with PAS/P... 164 8e-39 UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/P... 164 8e-39 UniRef50_C6XBI7 Diguanylate cyclase/phosphodiesterase with PAS/P... 164 8e-39 UniRef50_B4WQV5 Cyclic diguanylate phosphodiesterase (EAL) domai... 164 9e-39 UniRef50_B8CUT1 EAL domain protein n=1 Tax=Shewanella piezotoler... 164 1e-38 UniRef50_A8AKK1 Putative uncharacterized protein n=1 Tax=Citroba... 163 1e-38 UniRef50_Q1AVS2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ru... 163 1e-38 UniRef50_UPI0001850699 diguanylate cyclase/phosphodiesterase wit... 163 1e-38 UniRef50_A4BT02 Sensory box/GGDEF family protein n=1 Tax=Nitroco... 163 1e-38 UniRef50_A0Z1K1 Hybrid signal transduction histidine kinase and ... 163 1e-38 UniRef50_C5D2S1 Diguanylate cyclase/phosphodiesterase with PAS/P... 163 2e-38 UniRef50_A6CVM5 Putative uncharacterized protein n=1 Tax=Vibrio ... 163 2e-38 UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase... 162 2e-38 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 162 2e-38 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 162 3e-38 UniRef50_A6FHU8 GGDEF family protein n=1 Tax=Moritella sp. PE36 ... 162 3e-38 UniRef50_B6A0H8 Diguanylate cyclase/phosphodiesterase with PAS/P... 162 3e-38 UniRef50_A4B9U6 Putative diguanylate cyclase/phosphodiesterase (... 162 3e-38 UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/P... 162 3e-38 UniRef50_Q1JWS1 Response regulator receiver modulated diguanylat... 162 4e-38 UniRef50_Q1YLW9 Putative sensory box/GGDEF family protein n=1 Ta... 162 4e-38 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 162 4e-38 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 162 4e-38 UniRef50_Q2BNG9 PAS sensor diguanylate cyclase/phosphodiesterase... 161 4e-38 UniRef50_Q602I2 Sensory box protein/response regulator n=1 Tax=M... 161 5e-38 UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/P... 161 5e-38 UniRef50_C1DD31 Predicted signal transduction protein containing... 161 5e-38 UniRef50_A4W933 Diguanylate cyclase/phosphodiesterase n=3 Tax=En... 161 6e-38 UniRef50_A6FCC1 Putative orphan protein; putative conserved doma... 161 7e-38 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 161 7e-38 UniRef50_B9IRT3 Sensory box/GGDEF family protein n=74 Tax=Bacill... 160 7e-38 UniRef50_A6Q3C0 Signal transduction response regulator n=1 Tax=N... 160 8e-38 UniRef50_A4A5P4 Sensory box/GGDEF family protein n=1 Tax=Congreg... 160 9e-38 UniRef50_B6BGZ6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 160 9e-38 UniRef50_C9PFH4 Putative uncharacterized protein n=1 Tax=Vibrio ... 160 9e-38 UniRef50_Q2SDG6 Predicted signal transduction protein containing... 160 1e-37 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 160 1e-37 UniRef50_Q1Z8Q2 Putative uncharacterized protein n=2 Tax=Photoba... 160 1e-37 UniRef50_Q2BMC3 Hybrid signal transduction histidine kinase and ... 160 1e-37 UniRef50_Q8E9W7 Putative uncharacterized protein n=1 Tax=Shewane... 160 1e-37 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 160 1e-37 UniRef50_A5EN18 Periplasmic sensor diguanylate cyclase/phosphodi... 160 1e-37 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 159 2e-37 UniRef50_C6QR24 Diguanylate cyclase/phosphodiesterase with PAS/P... 159 2e-37 UniRef50_Q3BN81 Putative signal transduction protein n=9 Tax=Xan... 159 3e-37 UniRef50_B7ITK1 Sensory box/ggdef family n=144 Tax=Bacillus cere... 159 3e-37 UniRef50_A4U1P1 Sensory box/GGDEF family protein n=1 Tax=Magneto... 159 3e-37 UniRef50_Q142N0 Diguanylate cyclase/phosphodiesterase with PAS/P... 159 3e-37 UniRef50_B8DSE5 Diguanylate cyclase/phosphodiesterase with PAS/P... 159 3e-37 UniRef50_B1XK84 Two-component response regulator (ABC transporte... 158 4e-37 UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 158 4e-37 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 158 4e-37 UniRef50_Q2W5V0 Predicted signal transduction protein containing... 158 4e-37 UniRef50_Q21VJ9 Response regulator receiver modulated diguanylat... 158 4e-37 UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extra... 158 5e-37 UniRef50_B8KPF2 Response regulator receiver modulated diguanylat... 158 5e-37 UniRef50_A4TYP2 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 158 5e-37 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 158 5e-37 UniRef50_B1KIP0 Diguanylate cyclase/phosphodiesterase n=3 Tax=Sh... 158 5e-37 UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibac... 158 5e-37 UniRef50_A9NHF2 Predicted signal transduction protein n=1 Tax=Ac... 158 5e-37 UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 158 6e-37 UniRef50_A6QBP9 Putative uncharacterized protein n=1 Tax=Sulfuro... 158 6e-37 UniRef50_Q97LD1 Signal transduction protein containing diguanyla... 158 6e-37 UniRef50_A1AMG1 Response regulator receiver modulated diguanylat... 157 6e-37 UniRef50_Q3JCS1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ni... 157 7e-37 UniRef50_B6BIT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 157 7e-37 UniRef50_B1XQ65 Sensory box/GGDEF family protein n=1 Tax=Synecho... 157 7e-37 UniRef50_Q1K1R0 Response regulator receiver modulated diguanylat... 157 8e-37 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 157 8e-37 UniRef50_C9RWE1 Diguanylate cyclase/phosphodiesterase with PAS/P... 157 8e-37 UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/P... 157 8e-37 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 157 8e-37 UniRef50_Q89WT2 Bll0596 protein n=1 Tax=Bradyrhizobium japonicum... 157 9e-37 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 157 1e-36 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 157 1e-36 UniRef50_Q1LGY0 EAL-containing signal transduction protein n=2 T... 157 1e-36 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 157 1e-36 UniRef50_Q5QW01 Intracellular signaling protein (GAF,PAS,GGDEF,E... 157 1e-36 UniRef50_A1U286 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ma... 157 1e-36 UniRef50_B9ZR05 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 157 1e-36 UniRef50_Q88HN4 Sensory box protein/GGDEF domain protein n=1 Tax... 157 1e-36 UniRef50_D1B3P2 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 156 1e-36 UniRef50_B7KYX3 Diguanylate cyclase/phosphodiesterase n=4 Tax=Me... 156 1e-36 UniRef50_Q5R0L9 Signaling protein with a sensor domain, CHASE, G... 156 2e-36 UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 156 2e-36 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 156 2e-36 UniRef50_Q98BI1 Mll5564 protein n=2 Tax=Mesorhizobium RepID=Q98B... 156 2e-36 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 156 2e-36 UniRef50_B6QZ75 Rtn protein n=1 Tax=Pseudovibrio sp. JE062 RepID... 156 2e-36 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 156 2e-36 UniRef50_Q47EK9 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 156 2e-36 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 156 2e-36 UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/P... 156 2e-36 UniRef50_B0UAD7 Diguanylate cyclase/phosphodiesterase with PAS/P... 156 2e-36 UniRef50_C3X4J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 156 2e-36 UniRef50_B3PF41 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 156 2e-36 UniRef50_Q07HD2 Diguanylate cyclase/phosphodiesterase with PAS/P... 156 2e-36 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 156 2e-36 UniRef50_Q1H236 Response regulator receiver modulated diguanylat... 156 2e-36 UniRef50_Q2BIE6 Sensory box/GGDEF/EAL domain protein n=1 Tax=Nep... 156 2e-36 UniRef50_A3M765 Sensory box protein n=12 Tax=Acinetobacter RepID... 155 2e-36 UniRef50_B8GL67 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 3e-36 UniRef50_A3J7L9 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 155 3e-36 UniRef50_C5RNC8 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 3e-36 UniRef50_B1HWB0 Signaling protein n=2 Tax=Bacillaceae RepID=B1HW... 155 3e-36 UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 ... 155 3e-36 UniRef50_P74101 Uncharacterized protein sll1895 n=1 Tax=Synechoc... 155 3e-36 UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuni... 155 3e-36 UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 155 4e-36 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 4e-36 UniRef50_C3KBD8 Putative sensory box GGDEF/EAL domain protein n=... 155 4e-36 UniRef50_B6J3R5 Sensory box/GGDEF family protein n=5 Tax=Coxiell... 155 4e-36 UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 155 4e-36 UniRef50_D0I998 Regulatory component of sensory transduction sys... 155 4e-36 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 155 4e-36 UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 4e-36 UniRef50_A5EP96 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 4e-36 UniRef50_B9YZY8 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 4e-36 UniRef50_D2SEK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 4e-36 UniRef50_Q7NZT0 Putative uncharacterized protein n=1 Tax=Chromob... 155 4e-36 UniRef50_A4FDX2 PAS:GGDEF n=1 Tax=Saccharopolyspora erythraea NR... 155 4e-36 UniRef50_Q5NYX4 Complex sensory protein with histidine kinase do... 155 5e-36 UniRef50_Q486I4 Sensory box/GGDEF/EAL domain protein n=1 Tax=Col... 155 5e-36 UniRef50_B8EE65 Response regulator receiver modulated diguanylat... 155 5e-36 UniRef50_Q1QVL7 Diguanylate cyclase/phosphodiesterase with GAF s... 155 5e-36 UniRef50_B4RW56 Sensory box/GGDEF family protein n=1 Tax=Alterom... 155 5e-36 UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 5e-36 UniRef50_A3JIW6 Two-component response regulator n=3 Tax=Marinob... 155 5e-36 UniRef50_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodie... 155 5e-36 UniRef50_C9Y997 Putative uncharacterized protein n=1 Tax=Curviba... 155 5e-36 UniRef50_Q89HX5 Bll5864 protein n=1 Tax=Bradyrhizobium japonicum... 154 5e-36 UniRef50_A8ET73 EAL/GGDEF/PAS domain protein n=1 Tax=Arcobacter ... 154 5e-36 UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 6e-36 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 154 6e-36 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 7e-36 UniRef50_B0C4Z3 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 7e-36 UniRef50_Q30WY0 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 154 7e-36 UniRef50_C9Y1D6 Uncharacterized protein yjcC n=4 Tax=Enterobacte... 154 7e-36 UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 8e-36 UniRef50_A4WA59 Periplasmic sensor diguanylate cyclase/phosphodi... 154 8e-36 UniRef50_A8MM18 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 8e-36 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 8e-36 UniRef50_D2TLT3 Putative signal transduction protein n=2 Tax=Ent... 154 8e-36 UniRef50_C4SZL5 Predicted signal transduction protein containing... 154 8e-36 UniRef50_UPI000192678C PREDICTED: hypothetical protein n=1 Tax=H... 154 9e-36 UniRef50_Q28N76 Diguanylate cyclase/phosphodiesterase n=2 Tax=Rh... 154 9e-36 UniRef50_B1M266 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 9e-36 UniRef50_B8KFD6 Diguanylate cyclaSe/phosphodiesterase with PAS/P... 154 1e-35 UniRef50_A4CBR3 Predicted signal transduction protein containing... 154 1e-35 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 1e-35 UniRef50_A5ERD3 Diguanylate cyclase/phosphodiesterase n=12 Tax=B... 154 1e-35 UniRef50_A9D3R1 Sensory box/GGDEF domain/EAL domain protein n=1 ... 154 1e-35 UniRef50_A1T0Y1 Response regulator receiver modulated diguanylat... 154 1e-35 UniRef50_C1D4T3 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 1e-35 UniRef50_B9R6F1 Cyclic diguanylate phosphodiesterase domain prot... 153 1e-35 UniRef50_Q607V4 Sensory box protein/GGDEF domain protein n=1 Tax... 153 1e-35 UniRef50_Q4ZZ43 PAS:GGDEF n=17 Tax=Bacteria RepID=Q4ZZ43_PSEU2 153 1e-35 UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 153 1e-35 UniRef50_B1WR61 Putative uncharacterized protein n=1 Tax=Cyanoth... 153 1e-35 UniRef50_A7IP89 Diguanylate cyclase/phosphodiesterase with PAS/P... 153 1e-35 UniRef50_B8K9C5 PAS fold family protein n=7 Tax=Vibrionaceae Rep... 153 1e-35 UniRef50_C7R6X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 153 1e-35 UniRef50_A4ADN6 Sensory box EAL/GGDEF family protein (Fragment) ... 153 1e-35 UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling p... 153 2e-35 UniRef50_C6MET2 Diguanylate cyclase/phosphodiesterase with PAS/P... 153 2e-35 UniRef50_C1SL51 PAS domain S-box/diguanylate cyclase (GGDEF) dom... 153 2e-35 UniRef50_Q07W80 Diguanylate cyclase/phosphodiesterase n=8 Tax=Sh... 153 2e-35 UniRef50_B8KDR3 Sensory box/ggdef family protein n=1 Tax=Vibrio ... 153 2e-35 UniRef50_UPI00003844D4 COG2200: FOG: EAL domain n=1 Tax=Magnetos... 153 2e-35 UniRef50_Q2BMC4 Hybrid signal transduction histidine kinase and ... 153 2e-35 UniRef50_B7VQ16 Putative uncharacterized protein n=1 Tax=Vibrio ... 153 2e-35 >UniRef50_P76446 Protein rtn n=101 Tax=Enterobacteriaceae RepID=RTN_ECOLI Length = 518 Score = 1071 bits (2769), Expect = 0.0, Method: Compositional matrix adjust. Identities = 518/518 (100%), Positives = 518/518 (100%) Query: 1 MFIRAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFAD 60 MFIRAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFAD Sbjct: 1 MFIRAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFAD 60 Query: 61 LKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNEL 120 LKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNEL Sbjct: 61 LKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNEL 120 Query: 121 IPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQE 180 IPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQE Sbjct: 121 IPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQE 180 Query: 181 DYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAF 240 DYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAF Sbjct: 181 DYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAF 240 Query: 241 LLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLR 300 LLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLR Sbjct: 241 LLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLR 300 Query: 301 WRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDH 360 WRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDH Sbjct: 301 WRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDH 360 Query: 361 LHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGT 420 LHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGT Sbjct: 361 LHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGT 420 Query: 421 GHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQ 480 GHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQ Sbjct: 421 GHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQ 480 Query: 481 ARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQW 518 ARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQW Sbjct: 481 ARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQW 518 >UniRef50_C9XWJ5 Protein rtn n=9 Tax=Enterobacteriaceae RepID=C9XWJ5_CROTZ Length = 520 Score = 588 bits (1515), Expect = e-166, Method: Compositional matrix adjust. Identities = 284/503 (56%), Positives = 373/503 (74%) Query: 10 RKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQ 69 RK++L I G+ + ++++ + E +YD L D+ YL+TYFA LK++ D LQ Sbjct: 15 RKIILVGIATGLALTLMITLAARGWLHQQRENQYDMLARDIHHYLNTYFAQLKASADALQ 74 Query: 70 PLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKN 129 PLTL C + ELT+RAAF++NVR F+L++D +CSSATG++ +PL +L+P +D K Sbjct: 75 PLTLAECGAVSAELTSRAAFNVNVRAFLLIRDGVAYCSSATGKLHLPLRDLVPDIDTRKT 134 Query: 130 VDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALII 189 VD++I+PGTPM+P+KP+IV+W+ NPL++ G+ LN+NLTP L Y++RQ D +G+AL+ Sbjct: 135 VDISIIPGTPMMPDKPSIVMWFGNPLMEGRGIVTTLNVNLTPYLIYTARQNDLNGLALVA 194 Query: 190 GNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV 249 + AL+TFS ++M +EL P+R + G PL + LY D D A LLG + G + Sbjct: 195 KDRALTTFSGKVMTPDELPAEPLRSESVQGYPLKLYLYGDTMPAEDRHLALLLGLLIGVL 254 Query: 250 VGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEI 309 G L L+++R R GREI++AIKR QF+V YQPVVD ++ G+E L+RW HP AG I Sbjct: 255 GGALTVILLALRARSGREILSAIKRNQFFVVYQPVVDAATRQIRGVEALMRWEHPSAGMI 314 Query: 310 PPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKAD 369 PPDAFI+FAE+Q +IVPLT HLF+LIA+D L++ LP G K GINIAP HLHSE FKAD Sbjct: 315 PPDAFISFAEAQGLIVPLTHHLFKLIAQDVPRLQQSLPPGAKLGINIAPGHLHSEQFKAD 374 Query: 370 IQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLE 429 IQKL SLP +FQ+V EITERDM++E+EA LF WLH G EIA+DDFGTGHSALIYLE Sbjct: 375 IQKLHASLPPDYFQLVFEITERDMIREEEAMDLFTWLHEQGHEIAVDDFGTGHSALIYLE 434 Query: 430 RFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGV 489 RFTLDYLKIDRGF+NAIGTETITSPVLDAV++LAKRLNM+TVAEGVET EQA+WL+ RGV Sbjct: 435 RFTLDYLKIDRGFVNAIGTETITSPVLDAVISLAKRLNMVTVAEGVETQEQAKWLTVRGV 494 Query: 490 NFMQGYWISRPLPLDDFVRWLKK 512 NF+QGY+ SRP+ D +K+ Sbjct: 495 NFLQGYYFSRPVRAADLPASMKE 517 >UniRef50_A8GGV3 Diguanylate phosphodiesterase n=11 Tax=Enterobacteriaceae RepID=A8GGV3_SERP5 Length = 528 Score = 483 bits (1243), Expect = e-135, Method: Compositional matrix adjust. Identities = 232/508 (45%), Positives = 326/508 (64%) Query: 2 FIRAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADL 61 F R + R+ L+ V ++ IL + + H+ + QK+ F +L Sbjct: 7 FARHVSHRRRSLVKSSVVALVFFILFMGITLSLINHQRTQYQRAVEQRTQKFTLDTFNNL 66 Query: 62 KSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELI 121 RL PLT C + PE+T +AAF VRTF+LVK+ +CSSATG+M + L + Sbjct: 67 TQIMQRLMPLTEQPCSSSQPEITYQAAFHAGVRTFMLVKNGFAYCSSATGDMMLALKNIY 126 Query: 122 PALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQED 181 P +D + +D+ + GTP+VP KPA +W R +++G+ A L++ L P + + E Sbjct: 127 PEIDQRQRLDLKLQQGTPLVPGKPAFAVWLRQAGKEDTGILATLDIGLMPQQMFGTSPER 186 Query: 182 YDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFL 241 G+A+I+G+ AL++FS LM VN+L D IAG P+ + Y T ND+ L Sbjct: 187 APGIAIILGDRALTSFSPNLMPVNQLPDEKADRISIAGTPMIIMFYNQKLTPNDIRLTLL 246 Query: 242 LGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRW 301 + ++G+LCYY++ +R P R +M IKR +F++ YQPV T+ + GLE L+RW Sbjct: 247 GSLVLSLMIGVLCYYMLLLRQSPERALMRGIKRNEFFIEYQPVFHTKTGTIAGLEALIRW 306 Query: 302 RHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHL 361 +HP+ G IPPD FI +AES+ +IVPLT+HLF LIA DA L LP G K G+NI+P HL Sbjct: 307 QHPIEGRIPPDLFIPYAESEGLIVPLTRHLFRLIAEDAPRLATALPQGAKLGLNISPSHL 366 Query: 362 HSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTG 421 + SF D+ +LL LP ++F +V EITER M++E A F WLH G+EIAIDDFGTG Sbjct: 367 SAPSFHQDVYELLAQLPGNYFTLVFEITERGMVEEGNALAEFDWLHKQGIEIAIDDFGTG 426 Query: 422 HSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQA 481 HSALIYL+RF++DYLKIDRGF+N+IG +T+T+PVLDAV++LAK+L M TVAEGVET EQ Sbjct: 427 HSALIYLQRFSMDYLKIDRGFVNSIGRDTVTAPVLDAVISLAKKLKMQTVAEGVETAEQV 486 Query: 482 RWLSERGVNFMQGYWISRPLPLDDFVRW 509 +L E+ VNFMQGY+ S+PL +D+FV + Sbjct: 487 SFLQEQDVNFMQGYYYSKPLSIDNFVAF 514 >UniRef50_B2VIJ7 Rtn protein n=9 Tax=Enterobacteriaceae RepID=B2VIJ7_ERWT9 Length = 539 Score = 457 bits (1175), Expect = e-127, Method: Compositional matrix adjust. Identities = 216/491 (43%), Positives = 319/491 (64%), Gaps = 7/491 (1%) Query: 21 VMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQAN 80 ++I++ V+C H+ ++ LI + Y+ +LK LQ T D C + Sbjct: 33 IVISVAVTC-------HQRAEAHNQLIGQTRSYVIRVMDELKQILLPLQAETFDHCDRVR 85 Query: 81 PELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPM 140 +L +AA + N+R +LV + FCSSA+G M+ ++++ P + NK VD+ ++ G PM Sbjct: 86 DDLAEQAASTPNIRYILLVNNNAAFCSSASGPMNNEIHQISPFTNDNKAVDIRLVSGAPM 145 Query: 141 VPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSR 200 + KPA+V+W RNP +GV A LNLN+TP L +S+Q + G+A++ G+TA++T++ + Sbjct: 146 LRGKPAMVLWLRNPTTPGNGVLATLNLNMTPYLLLASQQRENTGMAIVTGDTAITTWNEQ 205 Query: 201 LMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSV 260 ++N + L P+R I G P+ + Y + D+ + G + +V +CY L + Sbjct: 206 VINTDALPPNPLRRIAIPGYPMMLYFYGEILPERDLHIIIMAGLLVAVLVASICYVLFRL 265 Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+RPG+EIM I+R +F+V YQP++ T + GLE L+RW HP G +P DAFI++AE Sbjct: 266 RLRPGKEIMQGIRRGEFHVEYQPIIATGSDTAYGLEALMRWVHPTEGRVPADAFISYAEG 325 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 Q +IVPLT+HLF LIARDA +L KV+PVG K GIN++P HL + F+ D+++ L +P Sbjct: 326 QNLIVPLTRHLFALIARDAHQLCKVVPVGTKLGINLSPSHLTNPDFRKDVRQWLAMMPVD 385 Query: 381 HFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDR 440 HF+ V EITER M+ E A ++F W+H ++IAIDDFGTGHSAL+YLE+F DYLKIDR Sbjct: 386 HFEYVFEITERTMVSESNADEMFDWIHQQNIKIAIDDFGTGHSALLYLEKFHFDYLKIDR 445 Query: 441 GFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRP 500 GF+ +IG +T+TSPVLD VLTLA+ L + TVAEGVET QA+WL RGV +QGY+ SRP Sbjct: 446 GFVQSIGMKTVTSPVLDTVLTLARELKLKTVAEGVETNAQAQWLINRGVTHLQGYFYSRP 505 Query: 501 LPLDDFVRWLK 511 L + ++ Sbjct: 506 LGVQQLAKYFS 516 >UniRef50_A4TND3 Membrane protein n=16 Tax=Enterobacteriaceae RepID=A4TND3_YERPP Length = 490 Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust. Identities = 205/477 (42%), Positives = 309/477 (64%) Query: 36 WHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRT 95 + E K T ++ Y + ++ +T +L PL+ +C+QA+P L RAAF+ VR Sbjct: 5 YRSSENKLTTQSGNIITYASHFLNEITTTMSQLIPLSTQSCEQASPTLHYRAAFTNGVRA 64 Query: 96 FVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPL 155 F+LV++ +CSSATGEM P++ + P +++++ +D I GTPM+PNKPAI +W R Sbjct: 65 FLLVREGVAYCSSATGEMHTPVSTIYPKVNLSQPLDFKIQQGTPMMPNKPAIAVWLRQAG 124 Query: 156 LKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRET 215 ++G+ A + +L P L + G A+II A++TF S ++ +++L ++ RE Sbjct: 125 RGDTGILATMEFSLHPYLLMGRSDNEMSGSAIIIDGLAITTFDSNVLPISQLPNLNAREI 184 Query: 216 KIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKRE 275 + G P+ + +Y + T ND+ L G + +VG+L YY++ + EI+ I+R Sbjct: 185 TLPGYPIKILIYHNSITKNDIRMTLLGGLLLAGLVGILAYYILITKKSAEAEILRGIRRG 244 Query: 276 QFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELI 335 +F+V YQPV + ++GLE L+RW+HP G I PD FI +AE+Q +I PLT HLFELI Sbjct: 245 EFFVEYQPVFRSHNQTISGLEALIRWQHPTEGRISPDIFIPYAETQHLIQPLTTHLFELI 304 Query: 336 ARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLK 395 RD A + + P G K NI+P HL + F D+ +LL L F V EITER M++ Sbjct: 305 IRDTALMVNLFPTGAKLAFNISPAHLADDDFCQDVSRLLQQLNTDIFTPVFEITERGMVQ 364 Query: 396 EQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPV 455 ++ A + FAWLHS G++IA+DDFGTGHSALIYLERFTLDY+KIDRGFI+ IG T+T+PV Sbjct: 365 KELALKQFAWLHSQGIQIAVDDFGTGHSALIYLERFTLDYIKIDRGFISTIGENTVTTPV 424 Query: 456 LDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 LD+VL LAK+LN+ T+AEG+ET +Q +L++ GVN++QGY +S+PL ++ ++ + Sbjct: 425 LDSVLILAKKLNIETIAEGIETEQQLHYLAKHGVNYLQGYLLSKPLSVEALAKFCHE 481 >UniRef50_A0KNV8 Rtn protein n=9 Tax=Gammaproteobacteria RepID=A0KNV8_AERHH Length = 510 Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 151/443 (34%), Positives = 228/443 (51%), Gaps = 17/443 (3%) Query: 76 CQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAIL 135 C++ L + A +VRT L K + +CSS G P L N + ++ Sbjct: 78 CEEVVQGLRDQVATVPDVRTVNLAKGEVVYCSSLYGPYQGPFK-----LADYANGQLDLM 132 Query: 136 PGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALS 195 G P+ P +P +V YR P+ + S + L L SR + L+IG ++ Sbjct: 133 RGNPVTPGRPLVV--YRQPVGEYSVLVGIDGYYLHNILDMLSRNSP---LTLVIGAQSML 187 Query: 196 TFSSRLMNVNELTDMPVRETKIAGIPLTV--RLYADDWT---WNDVWYAFLLGGMSGTVV 250 V + + +T P V L D++ WN + ++ + G + Sbjct: 188 ADGQIHDEVPPVALGSLEQTS-GKYPFRVVTDLSHDEYGSHIWNYSRASLIIYPLLGLLA 246 Query: 251 GLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIP 310 G L Y+L P +E+ A+ + +F QPVV +G EVL+RW+HP G I Sbjct: 247 GCLVYWLAGRSTSPSQELRRALDQREFIPYLQPVVTGDDAHWSGCEVLMRWQHPRQGLIS 306 Query: 311 PDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADI 370 PD FI AE +IVP+T+ L E + A LP G FG NI+ H S D Sbjct: 307 PDRFIPLAEDSGLIVPMTRLLMEQVREQFAGRVHSLPRGFHFGFNISASHCKDMSLLEDC 366 Query: 371 QKLLTSLPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLE 429 + + + + ++VLE+TER+++ E T +LFA LH +GV IAIDDFGTGHS+L YL+ Sbjct: 367 RDFINAFRENPIKLVLELTERELIVADETTDRLFAELHQLGVFIAIDDFGTGHSSLTYLQ 426 Query: 430 RFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGV 489 +F +D+LKID+ F+ IG++ ++S +++ V+ LA RL +L VAEGVE QA +L R V Sbjct: 427 QFQVDFLKIDQSFVGMIGSDALSSHIVENVIDLATRLGLLLVAEGVENEVQAAYLRARQV 486 Query: 490 NFMQGYWISRPLPLDDFVRWLKK 512 NF+QGY RP+P+ +F L + Sbjct: 487 NFLQGYLYGRPMPMKEFAGLLAQ 509 >UniRef50_A8GFM2 EAL domain protein n=2 Tax=Serratia RepID=A8GFM2_SERP5 Length = 538 Score = 235 bits (600), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 150/458 (32%), Positives = 238/458 (51%), Gaps = 15/458 (3%) Query: 62 KSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELI 121 K +R PL TC++ P L RAA + +R +LVKD +CSS G + ++ Sbjct: 65 KQQAERSMPLLGSTCEEVMPTLRFRAAQNQALRAMLLVKDGVIYCSSLFGTRKYLFSTIL 124 Query: 122 PALDINKNVDMAILPGTPMVPNKPAIVIWY-RNPLLKNSGVFAALNLNLTPSLFYSSRQE 180 P++ N + + P + P +++W P ++GV N+ L + ++ Sbjct: 125 PSV-ANDGAKLVLRPSLSVAKGVPTLIMWTPAQPDNNSNGVLHVFNIELLANFLLEPQEP 183 Query: 181 DYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLY---ADDWTWNDVW 237 V L +GN +L ++ + LT K P ++ L+ A + Sbjct: 184 YAQRVVLNVGNYSLEYGRREILRSDTLTTDLRYTAKSTRYPFSISLFGPQASMLALAALP 243 Query: 238 YAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEV 297 L + + + Y L + RM I AI R +F V QP+++ + R G+E+ Sbjct: 244 RHIPLSLLISLLAAYVVYLLTANRMSLSYHIGHAISRREFRVYCQPIINAETGRCVGVEM 303 Query: 298 LLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKF--GIN 355 LLRW++ G I PD FI AE +I+ LT++L + + ++ P F IN Sbjct: 304 LLRWKNKRQGWISPDVFIPLAEQHGLIIALTRYLMSTVVENL----QLFPPRPSFYISIN 359 Query: 356 IAPDHLHSESFKADIQKLLTSLPAHHF-QIVLEITERDMLKEQEATQLFAWLHSVGVEIA 414 +A +H + + DI++L LPAH ++LE+TER L E + Q+ L +G+ +A Sbjct: 360 VAAEHFNGVTIIDDIRRLW--LPAHPMPSLMLELTERTALSEIQYEQI-KTLKEMGIMLA 416 Query: 415 IDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEG 474 IDDFGTGHS+L YL++ + D LKIDRGF AIGT+ I + V D ++TLA RL + VAEG Sbjct: 417 IDDFGTGHSSLSYLKKLSPDVLKIDRGFTAAIGTDAINATVTDTIITLAHRLKLKLVAEG 476 Query: 475 VETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 VET EQA +L R VN +QG++ ++P+P++ F WL++ Sbjct: 477 VETAEQADYLRSRDVNALQGFYFAKPMPINVFPLWLQQ 514 >UniRef50_C6UPQ0 Predicted protein n=10 Tax=Enterobacteriaceae RepID=C6UPQ0_ECO5T Length = 536 Score = 231 bits (589), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 161/511 (31%), Positives = 260/511 (50%), Gaps = 22/511 (4%) Query: 8 FGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITD--VQKYLDTYFADLKSTT 65 F +K+ + I+ G++ +L+S A ++ DT IT + K LD +K TT Sbjct: 35 FNKKMFVLIIIPGIL-GVLLS-----FAMSVFQMNRDTTITAGILLKQLDNVTQIVKHTT 88 Query: 66 DRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALD 125 L + C+ +L A A + VRT L+++ CSS +G + +N++ Sbjct: 89 KLTSILVMKPCKDILEQLIANGALTPYVRTTGLIENNFQICSSVSGFKKMNVNDVYGTSF 148 Query: 126 INKNVDMAI--LPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYD 183 NKN + I + GT VP K AIV + P+ + F+ + L E+ D Sbjct: 149 HNKNKESRIVSISGTSFVPGKTAIV--FLMPIGNDMTAFSIVESRYIYDLMDVLDDENDD 206 Query: 184 GVALII--GNTALSTFSS--RLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYA 239 +L G +S ++ RL + + + + + + + LY + ++V+Y Sbjct: 207 SFSLRFTEGPAIISGVNNNDRLYMLKKDFNSAISQASLTVTTPMISLYP--YVISNVFYI 264 Query: 240 FLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLL 299 L + ++ L +S +M EI + +F V YQPV DT G+E L+ Sbjct: 265 LPLSILLSFILYFLWQRWISRKMSLAEEIKKGMSSGEFSVHYQPVCDTTTKACLGVEALM 324 Query: 300 RWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPD 359 RW+ I P FI AE + +I+PLT+HLFELI +D + P GINIA + Sbjct: 325 RWQREDGKNISPVVFIRAAEEENLIIPLTKHLFELIIQDVQSWKVKKPF--HLGINIAAE 382 Query: 360 HLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDF 418 HL F AD+ + ++ + F IVLEITER+++++ + A Q L S G E A+DDF Sbjct: 383 HLAHPDFVADVLHIKNAI-SDKFNIVLEITERNLVEDTDHALQKINELRSHGCEFAVDDF 441 Query: 419 GTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETP 478 GTG+ +L L++ ++DYLKID+ FI+ + T +PVLD ++ L+ RLN++T+AEGV T Sbjct: 442 GTGYCSLGLLQKLSVDYLKIDKSFIDTLTTAEDETPVLDIIIKLSNRLNLITIAEGVSTS 501 Query: 479 EQARWLSERGVNFMQGYWISRPLPLDDFVRW 509 QA +L V +QGY ++P+ +F +W Sbjct: 502 HQAEYLIHNNVTLVQGYLYAKPMKATEFYQW 532 >UniRef50_D0GSB3 Rtn protein n=6 Tax=Vibrio RepID=D0GSB3_VIBMI Length = 528 Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 158/497 (31%), Positives = 252/497 (50%), Gaps = 43/497 (8%) Query: 32 FLVAWH-KHEVKYDTLITDVQK----YLDTYFADLKSTTDRLQPLTLDTCQQANPELTAR 86 L++W H++K D I D K LD+ + +R P +C A P L Sbjct: 29 LLISWQTSHDLKND--IRDNLKAGNALLDSLVQHAEIANERAAPYLRMSCDNAQPYLADL 86 Query: 87 AAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPA 146 A + +VR+ L ++ K +C S G+ P+NE A + ++ +L G + PN A Sbjct: 87 VAITPDVRSIHLSENNKIYCDSLGGKGIRPINESFSA-----DEELLLLQGNKLSPNHSA 141 Query: 147 IVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNE 206 + I+ R+ VF+ ++ ++ S + Y +L IG F+ R + + Sbjct: 142 L-IFLRD--YDEGTVFSGVSSYYLRNIL--SLIKSYGNTSLHIGE---RWFNERGVVTHR 193 Query: 207 LTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRM---- 262 + + + P ++ + T D W F+ LL +MS + Sbjct: 194 SKPTTIEQNSLK-YPYSL---STSLTMEDYWDYFI----DAKHTSLLLLLVMSFGVGGYA 245 Query: 263 --RPGR------EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAF 314 R G+ EI AI+ ++F QP++D R+ EVL+RW+HP AG I PD F Sbjct: 246 FWRQGQINALDPEIRRAIRAQEFEPYIQPIMDIHG-RMASAEVLMRWQHPSAGLIRPDLF 304 Query: 315 INFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLL 374 I AE +IVP+T + + + +P NI+ H + D Q L Sbjct: 305 IPLAEESGLIVPMTSQVMAKVRDQLGPYQSKIPSDFHISFNISAKHCVNSDLVKDCQHFL 364 Query: 375 TSLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTL 433 ++ H + LE+TER+++++ +EA +LFA L+ +GV +AIDDFGTGHS+L YL+ F Sbjct: 365 SAF-NHPSLLSLELTERELIEDTEEARKLFAKLNQIGVRLAIDDFGTGHSSLNYLQTFQF 423 Query: 434 DYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQ 493 D LKID+ F+ IG+ + S ++D +L LA+RLNM TVAEG+ET EQ + + RGV++MQ Sbjct: 424 DVLKIDQSFVRMIGSNAVASHIVDTLLNLAQRLNMQTVAEGIETEEQVTYFAARGVDYMQ 483 Query: 494 GYWISRPLPLDDFVRWL 510 GY+ + P+P+DDF+ L Sbjct: 484 GYFYASPMPMDDFLTHL 500 >UniRef50_C6C3R8 Diguanylate phosphodiesterase n=1 Tax=Dickeya dadantii Ech703 RepID=C6C3R8_DICDC Length = 500 Score = 227 bits (579), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 152/447 (34%), Positives = 236/447 (52%), Gaps = 36/447 (8%) Query: 82 ELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMV 141 +L AA +RT LV++ +CSS G + P AL+ +A+LPG + Sbjct: 73 KLNMLAAIENYLRTISLVRNDIVYCSSLFGVDNRP-----AALERFYKGQLALLPGNSVT 127 Query: 142 PNKPAIVIWYRNPLLKNSGVFAALN----LNLTPSLFYSSRQEDYDGVALIIGNTALST- 196 PNKP +V++ +N V A ++ N+ SL S+Q D + L +G T LS Sbjct: 128 PNKP-LVMYMETT--ENGSVAAGIHGIHLFNILNSL---SKQRD---LYLRVGATWLSRD 178 Query: 197 -----FSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVW----YAFLLGGMSG 247 F R + ++P R + I TV D++T D W L+ + Sbjct: 179 GMVAPFDERTLP--NYVEVPSRHYYFS-ILYTVD---DNYTLVDFWDQEKMTLLIVFLIA 232 Query: 248 TVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAG 307 G+L Y S P + AI+ ++ YQPV+ TQ+ + G EVL RW HP G Sbjct: 233 LGSGMLAYKYTSRITSPVEALKRAIRNQEIVPFYQPVISTQSRELYGFEVLARWYHPKTG 292 Query: 308 EIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFK 367 I PD FI +E +I+PLT+ L E + D + +LP + GINI+ H E F Sbjct: 293 FISPDVFIPLSEQSGLIIPLTRLLMERVINDLISCQDILPEDLHIGINISAKHCQYEGFI 352 Query: 368 ADIQKLLTSLPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALI 426 D + + +L ++++EITER+ ++ T + F L + G+ IA+DDFGTG+S Sbjct: 353 DDCKYFIDALGTRKIRLMVEITEREKIEITPTTLRFFQNLKAAGILIALDDFGTGYSNFD 412 Query: 427 YLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSE 486 YL + D +KID+ FI+ I + ++P+++ V+ LA+ +N+ T+AEGVET QA +LSE Sbjct: 413 YLRQLQADLIKIDQSFISMIDENSQSTPLVNCVIDLAQNMNLKTIAEGVETEFQAEFLSE 472 Query: 487 RGVNFMQGYWISRPLPLDDFVR-WLKK 512 + ++++QGY SRPLP D+ V+ WL+K Sbjct: 473 KNIDYLQGYLFSRPLPFDECVKTWLQK 499 >UniRef50_P76261 Uncharacterized protein yoaD n=124 Tax=Enterobacteriaceae RepID=YOAD_ECOLI Length = 532 Score = 226 bits (576), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 150/520 (28%), Positives = 260/520 (50%), Gaps = 24/520 (4%) Query: 8 FGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDR 67 + R ++ C + ++ ++F+ + ++ + + LD L++ ++ Sbjct: 11 YRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEV 70 Query: 68 LQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALD-- 125 L PL C A+ L +AA VR+ LV+D +CSS G ++P+ +++ L Sbjct: 71 LLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAP 130 Query: 126 ---INKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDY 182 + +D A++ G+P+ ++ W N+GV +N++L ++ + Sbjct: 131 QPLLRLTIDRALIKGSPV------LIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQI 184 Query: 183 DGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWT---WNDVWYA 239 +L + L + + ++ + D + P T+ + T W+ + Sbjct: 185 SSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQ 244 Query: 240 FLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLL 299 L + +VG + + + RM REI + + +F + QP+++ ++ + G+E+LL Sbjct: 245 LPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILL 304 Query: 300 RWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKF--GINIA 357 RW +P G I PD FI AE +IVPLT+++ R V P+ +F GIN+A Sbjct: 305 RWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQ----RHVFPMSSQFHVGINVA 360 Query: 358 PDHLHSESFKADIQKLLTSLPAHHFQ-IVLEITERDMLKEQEATQLFAWLHSVGVEIAID 416 P H D+ + S AH Q ++LEITERD L + + ++ LH V++AID Sbjct: 361 PSHFRRGVLIKDLNQYWFS--AHPIQQLILEITERDALLDVD-YRIARELHRKNVKLAID 417 Query: 417 DFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVE 476 DFGTG+S+ +LE D LKID+ F AIG++ + S V D ++ L +RLN+ VAEGVE Sbjct: 418 DFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVE 477 Query: 477 TPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTP 516 T EQA++L GV+ +QGY ++P+PL DF +WL P Sbjct: 478 TQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPP 517 >UniRef50_A0KT96 EAL domain protein n=9 Tax=Shewanella RepID=A0KT96_SHESA Length = 519 Score = 223 bits (568), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 143/456 (31%), Positives = 240/456 (52%), Gaps = 17/456 (3%) Query: 65 TDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPAL 124 +D++ ++ ++ +LT F R +L DK +CSS TG++ + + Sbjct: 71 SDQIGEYAMNLTEEDCGKLTEYMRFRPYFRGVLLFNDKSFYCSSTTGDL-NLPLNTLLPV 129 Query: 125 DINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFA-----ALNLNLTPSLFYSSRQ 179 D K+ I+P TP P PAI+ ++N + V ++ + P +F + + Sbjct: 130 DRLKDGSQHIVPETPARPGVPAIITTFKNEQTQYGAVVVFEGQYLIDSFIQPDVFPRAVK 189 Query: 180 EDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYA 239 G+ A + ++ V V + + + ++ L+ W+ W A Sbjct: 190 TVVLGLHGATLPAAPQFSGNEVITVFAGDKFEVHQDFVILLEISKALF-----WHFYWIA 244 Query: 240 F-LLGGMSGT--VVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLE 296 F LL + T V+ L ++ + R +I + I+ ++F++ YQPVV ++ + G+E Sbjct: 245 FGLLLPLIFTLFVLSSLLFWKRNGRHSLADDIKSGIENQEFFLVYQPVVSSEDGKAKGVE 304 Query: 297 VLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINI 356 L+RW+HP G + PD FI AE ++IVPLT ++FE D +L+ L + G N+ Sbjct: 305 ALVRWQHPQMGLVRPDLFIPIAEESQLIVPLTNYIFERALADFRQLQ--LTSDFRIGFNV 362 Query: 357 APDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAID 416 AP+H +A + L + Q ++EITER +L + + A L +G+ +AID Sbjct: 363 APEHFIQSDIEAKFRYLRDAFAEIGVQPLIEITERQLLT-VDMCERIAALRELGILVAID 421 Query: 417 DFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVE 476 DFGTG + L L+ FTLDYLKID+ FI+ IG +++TS VLD ++ L ++N + VAEGVE Sbjct: 422 DFGTGQTTLSLLQTFTLDYLKIDKCFIDTIGQDSVTSHVLDTIIELCHKMNYVAVAEGVE 481 Query: 477 TPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 T EQA +L R V+F+QGY ++P+ L++ WLK+ Sbjct: 482 TQEQADYLISRDVHFLQGYLYAKPMKLNELELWLKE 517 >UniRef50_C6DJC0 EAL domain protein n=4 Tax=Pectobacterium RepID=C6DJC0_PECCP Length = 535 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 151/507 (29%), Positives = 251/507 (49%), Gaps = 14/507 (2%) Query: 13 LLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLT 72 LL +VAG++ +L F+ + + ++ + + A DRLQ Sbjct: 12 LLQLLVAGILPLLLGLLFTFVESRLMVKRDLESTAQIAMNHAENISAQAWKMVDRLQRFH 71 Query: 73 LDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELI--PALDINKNV 130 C EL + R ++ + +CSS G P++ +I P + Sbjct: 72 GQPCNIIGDELQRLGSVFSYFRAIGVIHNTNVYCSSTFGSTLTPISRVIQQPLPETYSER 131 Query: 131 DMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYS-SRQEDYDGVALII 189 + G+ V +PA+ I+ + PL + G +A ++ L + S+ Y + Sbjct: 132 WSLSIAGSDNVKERPAL-IFVQMPLTGD-GAYAMVDAQYLIDLMIAISKIRGYQLTLKMD 189 Query: 190 GNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYA----DDWTWNDVWYAFL-LGG 244 + T + + L E + + P+T+ + A + W ++ FL L Sbjct: 190 NGHPIQTGPAITPRIG-LFSTSALEIRSSRFPITLNITAPASQEIANWKQAFFTFLPLAI 248 Query: 245 MSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHP 304 + + +Y ++ EI I +F V YQP+ D ++ TG+E LLRWR Sbjct: 249 ILSLLFTTAIWYWQKRKLLFRDEIRKGIANGEFSVYYQPIYDAESQTCTGVETLLRWRRS 308 Query: 305 VAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSE 364 I PD FI+ AE++ MI+P+T+HLF+L+A D A + V P G G+N+A +HLH Sbjct: 309 NGKWIRPDIFISAAEAESMIIPITRHLFDLVASDIASWQ-VKP-GFHLGLNVAAEHLHHP 366 Query: 365 SFKADIQKLLTSLPAHHFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHS 423 SF +D+ + + +H I LE+TER+++ E Q L G I IDDFGTGH Sbjct: 367 SFVSDVHRFAEKVASHSLSISLELTERNLISNGPEIIQRLHQLREDGFMITIDDFGTGHC 426 Query: 424 ALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARW 483 +L YL+ F LD LKID+GF++AI + +P+LDA++ L+ R+N+ +VAEGVET +Q + Sbjct: 427 SLSYLQNFPLDCLKIDQGFVSAISSPDEEAPILDAIINLSHRINLQSVAEGVETKQQLMY 486 Query: 484 LSERGVNFMQGYWISRPLPLDDFVRWL 510 L + GV ++QG+ ++P+ + F+ WL Sbjct: 487 LQQHGVKYIQGFLYAKPMDNESFLVWL 513 >UniRef50_A6V3S1 Aminoglycoside response regulator n=3 Tax=Proteobacteria RepID=A6V3S1_PSEA7 Length = 526 Score = 220 bits (560), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 149/508 (29%), Positives = 253/508 (49%), Gaps = 40/508 (7%) Query: 22 MIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANP 81 ++ +L++ L F A + + + V + LDT + + DR Q C + Sbjct: 23 IVPLLMAPLVFQQARMRADGEAAVTSVAVLRQLDTLLGVVSGSLDRSQGALGKPCAEVLG 82 Query: 82 ELTARAAFSMNVRTFVLVKDKKTFCSSATGEM-DIPLNELIPALDINKNVDMAILPG--- 137 LT S R+ VLV+ +CSS GE+ D+PL AL ++ PG Sbjct: 83 RLTRMTMLSPYFRSLVLVERGNVYCSSLQGELKDLPLPVAFKALG-------SLAPGQRI 135 Query: 138 -----TPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDG---VALII 189 TP VP + ++++ + SGV A ++ L + YDG V +++ Sbjct: 136 TPSNATPQVPERASVIMSRGDA--NGSGVLAIIDGQY---LLDIQQAASYDGRFQVQMVL 190 Query: 190 GNT------ALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLY-ADDWTWNDVWYAFLL 242 + + + PV E ++A P Y AD W + F++ Sbjct: 191 RESQRQLPGGMPATQDGGGAIAASARFPV-EVRVAVAPALASAYRADAWRH---YTPFIV 246 Query: 243 GGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWR 302 ++ + G L + R+ ++ A++ +F++ YQP++ G+E L+RWR Sbjct: 247 --LAAMLAGYLAHLFCRRRLSLVGDMYRAMRAREFHMVYQPIIRLDTGECRGVEALVRWR 304 Query: 303 HPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLH 362 P ++ PD F+ AE MI LT+H+F L+A D A+L L G G+N++ HL Sbjct: 305 RPDNSQVRPDIFVPLAEDNGMIGDLTRHIFGLVAADLAQLG--LGAGDHLGVNVSGSHLA 362 Query: 363 SESFKADIQKLLTSLPAHHFQIVLEITERDML-KEQEATQLFAWLHSVGVEIAIDDFGTG 421 + F D+++LL ++ + Q+VLE+TER+ L ++ +A + L +GV+ A+DDFGTG Sbjct: 363 GQGFVDDVRRLLGAIGSDGPQLVLEVTEREALPRDAQAQRNIRQLRELGVQWALDDFGTG 422 Query: 422 HSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQA 481 S+L YL++ D+LK+DR F++ +GTE++ + VL+ ++ LA+RL++ AEG+ET EQ Sbjct: 423 QSSLSYLQQLHADFLKVDRSFVSGVGTESVNAVVLETIIGLAQRLDLDVTAEGIETREQE 482 Query: 482 RWLSERGVNFMQGYWISRPLPLDDFVRW 509 ++L V + QGY S PL + W Sbjct: 483 QYLCGHSVQWGQGYLFSPPLTAAELGAW 510 >UniRef50_A6AJG8 Rtn protein n=1 Tax=Vibrio harveyi HY01 RepID=A6AJG8_VIBHA Length = 501 Score = 214 bits (545), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 150/521 (28%), Positives = 258/521 (49%), Gaps = 46/521 (8%) Query: 10 RKLLLTCIVAGVMIAI-LVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRL 68 +++LL IV ++I+I V Q + EV+ + + +D + + R Sbjct: 8 KRILLAFIVLILLISIGSVGVYQLSKSNLHREVRSSLEVG--KSLMDKLVKNADVASQRA 65 Query: 69 QPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINK 128 P T C+QA P L +V+ L KD FC S G+ D ++P + Sbjct: 66 LPYTKMECEQALPYLRDLVVTIPDVQMIALAKDNHVFCGSLVGKRDY----IVPNYHFSG 121 Query: 129 NVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALI 188 + + ++ P PN PA++ ++N N+GV +++ ++ S +D D Sbjct: 122 D-KLFLVSSLPDKPNTPALI--FKNET-GNTGVGVSVSGYYLKNIL-SLTLKDLD----- 171 Query: 189 IGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTW-------NDVWYAFL 241 T L + +++D P +P+T+++ + D+ + +D + +L Sbjct: 172 ---TYLQVGEKWINKAGQISDQP--------LPVTIQVESKDYPYRLQVSLFHDDYMNYL 220 Query: 242 LGGMSGTVVGLLCYYL-------MSVRMRPGRE--IMTAIKREQFYVAYQPVVDTQALRV 292 L T+ ++ + L ++ P E + A+ +F QP VD + + Sbjct: 221 LSHKRSTIFIIILFALSMSWLIFVATGQTPSMEDKLRQALANNEFVPYVQPYVD-KTNKF 279 Query: 293 TGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKF 352 G EVL+RW P G I PD FI AE +I+P+T+ L ++ + A + LP Sbjct: 280 VGFEVLVRWLSPKEGLIRPDLFIPLAEDSGLIIPMTKSLMLQVSNELAACSQSLPPDFSV 339 Query: 353 GINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGV 411 NI+ H + D + L+S P Q+ LE+TER+++++ EA LF L V Sbjct: 340 AFNISAKHCVNSELLEDSLEFLSSFPEKKVQLCLELTERELVRDTDEARALFHSLSEHDV 399 Query: 412 EIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTV 471 +AIDDFGTGHS+L YL +F D LKID+ F+ IG +++++ +++ +L LA RL M T+ Sbjct: 400 SLAIDDFGTGHSSLSYLRQFRFDILKIDQSFVQMIGNDSVSAHIVENLLDLASRLGMKTI 459 Query: 472 AEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 AEGVET EQA +L ++ +QGY+ ++P+PL DF++ L++ Sbjct: 460 AEGVETAEQAEYLRSHNIDCLQGYYFAKPMPLKDFIQQLEQ 500 >UniRef50_C6CFE9 Diguanylate phosphodiesterase n=2 Tax=Dickeya RepID=C6CFE9_DICZE Length = 501 Score = 214 bits (544), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 147/476 (30%), Positives = 248/476 (52%), Gaps = 26/476 (5%) Query: 47 ITDVQKYLDTYFADLKSTTDRLQPLTLDTCQ-QANPELTARAAFSMNVRTFVLVKDKKTF 105 + ++++ LD + K+ + +PL +C + +L AA + ++RT L+K + Sbjct: 41 VKNIEEILD----EAKNAVEDSKPLLALSCTPEVIRQLNMTAAVASHLRTVSLIKRDVVY 96 Query: 106 CSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAAL 165 CSS G + P AL+ ++A+L G + P++ ++++ N + GV A Sbjct: 97 CSSLYGVDNRP-----AALERFHMRELALLAGNSVTPDR-TLIMYLGNTAYGSVGV-AIH 149 Query: 166 NLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVR 225 +LT L S++ + + L++GNT +S +++ N TD+P +G Sbjct: 150 GQHLTSVLDLLSKRRN---LYLLVGNTWISR-ENQVSTFNP-TDLPNFVIIPSGHYHFSI 204 Query: 226 LYA--DDWTWNDVWY----AFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYV 279 LY+ + ++ D WY FL+ + G L Y + P I AI+ ++ Sbjct: 205 LYSLNEKYSLADFWYKEKMTFLIVFLIALGSGFLAYKYSTRINSPYDGIRRAIENQEVLP 264 Query: 280 AYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDA 339 YQPV+ T + + G+EVL RW HP +G I PD FI E +I+P+T+ L + RD Sbjct: 265 YYQPVISTVSREIYGVEVLARWHHPKSGFISPDIFIPLCEQSGLIIPMTRSLMSSVVRDL 324 Query: 340 AELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLK-EQE 398 LP + INI+ H S+ F D Q + + + +++EITER+ + E Sbjct: 325 TPHLNTLPDNLHIAINISAQHCQSDDFITDCQNFIAAFGDKNVHLMIEITEREKVDITPE 384 Query: 399 ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG-TETITSPVLD 457 F L GV IA+DDFGTG+S YL + ++ +KID+ F++ I + +S +++ Sbjct: 385 TIGFFKKLSDAGVLIALDDFGTGYSNFDYLRKLHVNVIKIDQSFVSMIDENDPQSSTLVN 444 Query: 458 AVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVR-WLKK 512 V+ LA+++ ++T+AEGVET Q +LS + +NFMQGY+ SRPLP D+ + WL K Sbjct: 445 CVIDLAQQMKLMTIAEGVETEFQTEFLSRKHINFMQGYFFSRPLPFDELAQTWLNK 500 >UniRef50_C1HI32 Rtn protein n=6 Tax=Escherichia RepID=C1HI32_9ESCH Length = 511 Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 154/511 (30%), Positives = 239/511 (46%), Gaps = 45/511 (8%) Query: 16 CIVAGVMIAILVSCLQFLVAWHKHEVKYDTLI--TDVQKYLDTYFADLKSTTDRLQPLTL 73 +VAG +I + + L F W K E+ D+ I Y++ S + + L L Sbjct: 13 AMVAGSLIFLFIILLTFF--WKKAELVNDSQIRVNFALGYIENILNQNNSISQEAEHLLL 70 Query: 74 DTCQ-QANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDM 132 + C EL+ +R L + + FCS+ G P+ E DM Sbjct: 71 NNCNADTQHELSNLLLKRPQLRALSLARQEAVFCSTHPGLPVGPVAE-----KEQWRHDM 125 Query: 133 AILPGTPMVPNKPAIVIW--YRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIG 190 I P + W R P KN V A + + S + +G Sbjct: 126 LI-----RFPEDTGTLPWILLRTPY-KNGTVITATDYYFIQDII--SVVHAVPAIRFRLG 177 Query: 191 NTALSTFSSRLMNVNELTDMPVRETK----------IAGIPLTVRLYADDWTWNDVWYAF 240 NT LS NV L D + + I IP+ ++L + W WY Sbjct: 178 NTVLSASGK---NVTLLPDDSGIQKESHSKKYPFSLIYIIPVKMQL---TYAWKQAWYMI 231 Query: 241 LLGGMSGTVVGLLCYYLMSVRMRPGREI---MTAIKREQFYVAYQPVVDTQALRVTGLEV 297 + G +L +L+S R RP + A+ +F +QP++ + ++TG EV Sbjct: 232 PVAIFGG----ILTAFLLS-RRRPSSPLDMLKNALAHGEFRPYFQPIISAKNHQLTGCEV 286 Query: 298 LLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIA 357 L+RW HPV+G IPPD FI AES +I P+TQ L + + LP GINI+ Sbjct: 287 LIRWHHPVSGIIPPDQFIPLAESTGLIAPITQQLMSQVEHSLNSVAHFLPNQFHIGINIS 346 Query: 358 PDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLK-EQEATQLFAWLHSVGVEIAID 416 P H S + K L++ P ++VLE+TER+ L E+ LFA LH GV A+D Sbjct: 347 PAHFLSPGLEDSCMKFLSTFPKGKVKLVLELTERNQLSVTAESKALFAKLHQQGVLFALD 406 Query: 417 DFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVE 476 DFGTG++ YL+ F +DY+K+D+GF+ +G + I+ +++ V+ LA+RL + +AE +E Sbjct: 407 DFGTGYATHSYLQSFPVDYIKLDKGFVQMVGVDEISGHIVENVIELARRLGIDIIAEVIE 466 Query: 477 TPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 T Q +++E+G ++QGY + PLP + F+ Sbjct: 467 TESQELFMTEKGSCYLQGYRYAPPLPAEQFI 497 >UniRef50_B2VJL5 Putative uncharacterized protein rtn n=1 Tax=Erwinia tasmaniensis RepID=B2VJL5_ERWT9 Length = 523 Score = 211 bits (538), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 144/462 (31%), Positives = 229/462 (49%), Gaps = 16/462 (3%) Query: 65 TDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELI--- 121 TD LQ + C+ +L A + R+ L +D +CSSA G P+ +I Sbjct: 63 TDSLQTFSNRPCKDIRSQLQKLGALNPYFRSVGLTQDNTVYCSSAFGATRGPVAGMIRHA 122 Query: 122 -PALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQE 180 PA ++ L GT V ++PA++ + P +G +A ++ L ++ + Sbjct: 123 LPA--PGQSWWTLSLAGTFGVQDRPAVIFMRQTP--GKTGSYAVVDGQYLIDLMRATGLK 178 Query: 181 DYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAF 240 + + G ++ L + + P+ + + A W Sbjct: 179 LGYHITMRFGGGYQIANAAPLNPQQANWKTRTFNSGSSHYPIAISISAPRTETLQNWRQV 238 Query: 241 LLGGMSGTVVGLLCYYLMS---VRMRPG--REIMTAIKREQFYVAYQPVVDTQALRVTGL 295 LL M V+ + + ++ +R R E+ + +F V YQPV + ++ G+ Sbjct: 239 LLTFMPMAVILSVLFVAVTNSWLRRRSSYRDELRRGMAFGEFSVHYQPVCNLVNGQLAGV 298 Query: 296 EVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGIN 355 E L+RW+ + PD FI AE++ MIV LT+HL +LIA+D A + +P G GIN Sbjct: 299 EALMRWQRSDGSWVRPDIFIAAAEAEGMIVQLTRHLLQLIAKDCASWK--VPAGFHIGIN 356 Query: 356 IAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIA 414 +A DHL E F DI+ ++ I LE+TER ++ E + A L S G+ +A Sbjct: 357 VAADHLQHEDFVKDIRGFSQNIAHLLPTITLELTERSLISEGDLVAHRLAELRSEGIRVA 416 Query: 415 IDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEG 474 IDDFGTGH +L YL+ F LDYLKID+ F+NAI + +P+LD ++ LA RL + VAEG Sbjct: 417 IDDFGTGHCSLTYLQTFPLDYLKIDKSFVNAIESADGETPILDTIIQLAHRLALQVVAEG 476 Query: 475 VETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTP 516 +ETP Q +L GV F+QG++ +RPL + W+++ P Sbjct: 477 IETPLQMEYLKNHGVVFIQGFYYARPLSSAALMVWIEQNPPP 518 >UniRef50_D2TJN3 Putative exported protein n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TJN3_CITRO Length = 513 Score = 209 bits (531), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 152/454 (33%), Positives = 224/454 (49%), Gaps = 26/454 (5%) Query: 76 CQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNEL----IPALDINKNVD 131 C LT AF+ +R ++++ + CS +GE P ++L +PAL + Sbjct: 68 CPDMLDALTRTRAFTPYIRDIGVLENGEMTCSFVSGEKRQPFSQLSGLTLPALLPER--- 124 Query: 132 MAILPGTPMV--PNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALII 189 IL M P++P VI Y + VF ++ L E L + Sbjct: 125 -MILVAKRMAEGPDRP--VILYAEKISAQKAVFTIVDSQYIQELMDILAAERSSVFRLTM 181 Query: 190 GNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV 249 GN ++ E + R T G + +R+ T + W LL + ++ Sbjct: 182 GNGNAIVSG---VDSGEKPFLTQRFTSANG-DIHLRVETSFSTLSAWWLQNLLIFILLSL 237 Query: 250 VGLLCYYLMSVRMRP-----GREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHP 304 + L+ R R GREI I +F V YQPV + G E LLRW P Sbjct: 238 CFSFLFVLLYRRWRQKSLSLGREIERGIANNEFQVHYQPVFNVGRSACGGAEALLRWPQP 297 Query: 305 VAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSE 364 I PD FI AE++ IV LT+HLF+LIA+D + + +P G +NIAP+HL S+ Sbjct: 298 HGRFISPDIFITAAENEGKIVALTRHLFDLIAKDVSRWK--VPEGFYISVNIAPEHLISD 355 Query: 365 SFKADIQKLLTSLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHS 423 F +D+ L L ++LE+TER ++ E + + L S VEIAIDDFGTG+ Sbjct: 356 DFVSDVMALKERLA--KLGLILELTERSLIAEPAKVSAKLELLRSQQVEIAIDDFGTGYC 413 Query: 424 ALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARW 483 +L YL++ DYLKIDR FIN I T P+LD ++TL++ L + VAEGV + Q R+ Sbjct: 414 SLSYLQQLPADYLKIDRTFINTIDTSGSDVPILDTIITLSQNLGLQVVAEGVSSKHQLRY 473 Query: 484 LSERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQ 517 + ++GVN++QGY +RP+ DF+ WL K Q Sbjct: 474 ILDQGVNYIQGYLYARPMSSADFMVWLDKDVQQQ 507 >UniRef50_C8QG51 EAL domain protein n=3 Tax=Enterobacteriaceae RepID=C8QG51_9ENTR Length = 534 Score = 208 bits (529), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 162/526 (30%), Positives = 253/526 (48%), Gaps = 33/526 (6%) Query: 4 RAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVK-YDTLITDVQKYLDTYFADLK 62 R +FG L++ + +++ IL + ++ H+ ++ ++L+ ++ D+ + Sbjct: 6 RNRDFGWLLIVCAGLLPLVLGILCTAIEARHTVHQQQINTANSLLAQAERMSDSAW---D 62 Query: 63 STTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELI- 121 TD L+ C +L + R+ ++ CSSA G L+E+I Sbjct: 63 MITD-LRQFHYQPCSAIEGKLQREGNLNAYFRSIGKLEGDNVTCSSAYGMYPGTLSEMIL 121 Query: 122 --PALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLN--------LTP 171 P + K L GT VP++PA++ + P G +A ++ L Sbjct: 122 RQPPV-TGKAWWSISLRGTYGVPDRPAVIFVRQLP--DGEGFWAVIDGQYLMDFMRALGE 178 Query: 172 SLFYSSRQEDYDGVALIIGNTALST---FSSRLMNVNELTDMPVRETKIAGIPLTVRLYA 228 S Y DG + G + S + + + + P+ + +P + L A Sbjct: 179 SRNYHMTMRFNDGAPITSGPVEVQPEIWLKSEPL-LAQSSRYPISVEVV--VPPSELLKA 235 Query: 229 DDWTWNDVWYAFL-LGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDT 287 W + FL + + ++ +L + R+ EI A++ QF V YQPV Sbjct: 236 ----WRQALFIFLPMAAIFSILLMILTANWLRRRISWRDEIRRAMRNRQFSVHYQPVYSV 291 Query: 288 QALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLP 347 G+E LLRW P I PD FI+ AE + MIVPLT+HL EL+A D + V P Sbjct: 292 AEQHCNGVEALLRWHLPNGDTIRPDIFISAAEEEGMIVPLTRHLLELMAEDIQSWQ-VAP 350 Query: 348 VGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWL 406 G G+N+A +HL F DI+ + QI LE+TER ++ + E + L Sbjct: 351 -GFHIGLNLAAEHLQHPDFVKDIELFARRVQDKKLQITLELTERSLIHDGEDVARKLRLL 409 Query: 407 HSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRL 466 S G+ +AIDDFGTGH +L YL F LDYLKIDRGFINAI +PVLDA++ LA++L Sbjct: 410 QSQGMRVAIDDFGTGHCSLSYLLTFPLDYLKIDRGFINAIERLDGETPVLDAIINLARKL 469 Query: 467 NMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 + + EGVET Q ++L +RGV F+QGY+ + P+ D WL + Sbjct: 470 QLEVLGEGVETSLQFQYLQQRGVLFIQGYYYAWPMDNDRLRTWLNE 515 >UniRef50_A4SI84 EAL domain protein n=3 Tax=Gammaproteobacteria RepID=A4SI84_AERS4 Length = 527 Score = 208 bits (529), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 140/445 (31%), Positives = 228/445 (51%), Gaps = 18/445 (4%) Query: 70 PLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKN 129 PL C + N +L + A VR+ LVK+ +C+S G + +++ P + Sbjct: 72 PLVGAPCDEINFQLREQVALVPFVRSVNLVKEGMLYCTSLFGSVR-EVDDASPYI----A 126 Query: 130 VDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALII 189 + ++ G + N P +++ R+ +N+ + A L+ L S + + + + Sbjct: 127 RKLLLMRGNQVRANHPLLIV--RSEQGRNAALSAIDGEYLSVMLTLSHHAGN---LFMRV 181 Query: 190 GNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRL-YADDWTWNDVW-----YAFLLG 243 G+T L +L + E P ++ Y W+ +W LL Sbjct: 182 GSTWFDEAGHYLDKAPDLHALARTELTSPHYPFSIHAGYVTLAYWHSLWDHKSLILSLLC 241 Query: 244 GMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRH 303 G+S LL ++L+ P E+ A++ ++F QP+V T R+ G+EVL+RW+H Sbjct: 242 GLS-LAFALLVWWLLGRPGSPVGELRRALRAKEFEPYLQPLVTTSDTRLMGVEVLMRWQH 300 Query: 304 PVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHS 363 P +G I PD FI AE +IVP+T + + +A+ + + LP G NI+ H Sbjct: 301 PNSGLIRPDLFIPQAEESGLIVPMTTLIMKKVAQVLSREQARLPDGFHISFNISAAHCRD 360 Query: 364 ESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGH 422 + + + L +VLE+TER++L T LF L +GV++AIDDFGTGH Sbjct: 361 LALLQECRTFLAQFAPGKIVLVLELTERELLVVDPNTLSLFRQLDQMGVKLAIDDFGTGH 420 Query: 423 SALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQAR 482 S+L YL++F +DYLKID+ FI IGTE+++ ++ V+ L RL +L +AEGVE+ QA Sbjct: 421 SSLFYLQQFHVDYLKIDQSFIGRIGTESLSEHIVANVIDLGARLGLLLIAEGVESELQAA 480 Query: 483 WLSERGVNFMQGYWISRPLPLDDFV 507 +L +GV++MQGY RP+PL F Sbjct: 481 YLRAKGVDYMQGYLFGRPMPLQHFC 505 >UniRef50_Q7P1U8 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P1U8_CHRVO Length = 513 Score = 206 bits (525), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 151/456 (33%), Positives = 236/456 (51%), Gaps = 19/456 (4%) Query: 68 LQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDIN 127 L PL C +A L + A + VR+ VL+ +CSS +G + +PA D Sbjct: 70 LLPLAGGPCDKAVYPLRRQVAVAPFVRSAVLLDGDTVYCSSLSGST----SWAMPARDFV 125 Query: 128 KNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVAL 187 + M +L G + PN P +++YR ++ V A L +L +S D V L Sbjct: 126 QG-RMQLLSGNAVTPNVP--LLYYRLHRGGDAAVTAVDGRYLQLALQDAS---DTIPVFL 179 Query: 188 IIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAF-----LL 242 +G L + L + + + P TVR D W+ ++ ++ Sbjct: 180 QVGEHWLGPRRNGAGQAPALGQV-AELRRSSRYPFTVRANYDLPPWHRQLWSHHAPLTVI 238 Query: 243 GGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWR 302 + G + G Y+L+ E+ A+ ++F QP+V G EVL+RWR Sbjct: 239 LLLLGLLAGATLYWLLGRPASFTGELRRALANDEFEGYLQPIVKPGLPDWRGAEVLMRWR 298 Query: 303 HPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLH 362 HP G I PD FI AE +IV +T+ + + + L LP G+NI+ HL Sbjct: 299 HPREGLIRPDLFIPRAEESGLIVEMTRRMMDAVIAKVGRLS--LPQDFHLGVNISRAHLQ 356 Query: 363 SESFKADIQKLLTSLPAHHFQIVLEITERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTG 421 S D ++ L + LE+TER+M++ E LF L ++GV+IA+DDFGTG Sbjct: 357 EGSLYGDCRRWAGLLAESGAVLTLELTEREMVEITPEVEALFRSLDALGVKIALDDFGTG 416 Query: 422 HSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQA 481 HS+L+YL++ T+D LKID+GF+ IG++ ++ ++D+V LA +L + TVAEGVET EQ Sbjct: 417 HSSLVYLQQLTVDGLKIDQGFVAGIGSDGLSGHIVDSVAELAAKLGLETVAEGVETAEQF 476 Query: 482 RWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQ 517 +LS GV ++QG++I+RP+PLD+FVR +++ T Q Sbjct: 477 DYLSRLGVGWLQGFYIARPMPLDEFVRRVRQGGTWQ 512 >UniRef50_C9NZP3 Rtn protein n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NZP3_9VIBR Length = 499 Score = 204 bits (520), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 133/427 (31%), Positives = 219/427 (51%), Gaps = 17/427 (3%) Query: 89 FSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIV 148 F +R ++V+D CSS GE+ + L + + V + + G P + +V Sbjct: 85 FESYLRELIIVQDGVAICSSKRGELHLDLTGVFKRNEAKSGVFLFDIKGDP---RQRTMV 141 Query: 149 IWYRNPLLKNSGVFAALNLN-LTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNEL 207 + NSG FA ++ N L L + ED D ++ I + + V++ Sbjct: 142 VVTAQEDRANSGAFAIVDKNYLVERL---GKVED-DKLSFITARFGQKVYPADRTFVSD- 196 Query: 208 TDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPG-- 265 T + + G L V ++Y +S + L + +R R Sbjct: 197 TLHYTSTSSLYGFSLLVEASPAFIKRRAIFYGLSSLPLSLLISITLFAVMSHIRNRDSLV 256 Query: 266 REIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIV 325 ++ +KR++ ++AYQP+VD+Q + GLE L+RW+HP G I PD FI AE Q++I Sbjct: 257 DDLKKGLKRKELFLAYQPIVDSQTETLAGLEALIRWQHPTLGLIRPDVFIPLAERQQLIN 316 Query: 326 PLTQHLFELIARDAAELEKVLPV-GVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQI 384 +T ++ + R A+L+ + G+ GIN+ P +LH ES ++ Q+ Sbjct: 317 TITDYVLK---RTLADLQSIANFNGIHLGINVPPSYLHDESHLINLHSYARQFRHIGIQL 373 Query: 385 VLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFIN 444 +E+TER++L ++ T L A L G+ ++IDDFGTGH+AL +++ DYLKID+ F++ Sbjct: 374 TVEVTEREILDDKGRTAL-ADLRKSGILVSIDDFGTGHTALSVIQKTQFDYLKIDKCFVD 432 Query: 445 AIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLD 504 IG ET+ S VL+ ++ L RL + +AEGVE Q +L++ V+++QGY S+PL LD Sbjct: 433 TIGLETVNSTVLNTIIDLGHRLGVKMIAEGVEEQNQVEYLAKMNVSYLQGYHFSKPLELD 492 Query: 505 DFVR-WL 510 D WL Sbjct: 493 DLKESWL 499 >UniRef50_UPI00016A4C59 diguanylate phosphodiesterase n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A4C59 Length = 517 Score = 204 bits (520), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 147/506 (29%), Positives = 232/506 (45%), Gaps = 25/506 (4%) Query: 17 IVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTC 76 I + V + +LV + +A + +V+ ++ D+ +D + + +L L C Sbjct: 21 IASFVAVILLVLTAGYHIALERAQVQRKVVVEDIDNSIDRIVTETRLGERKLANLVGQPC 80 Query: 77 QQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILP 136 + LT R F RT ++V+D +CS+ G + IPL + + + L Sbjct: 81 PEVQASLTLRDVFVPYRRTAMMVQDGNAYCSTILGPVSIPLTTYL--VQSGSTQQIVFLG 138 Query: 137 GTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALST 196 GT +P P + I+ P+ + G+ + + ++ ++ G+ T Sbjct: 139 GTQSIPEVPVMAIY--APVDRRRGILYIVEGAYVADILARAKSSGAKSASVSDGSGGTLT 196 Query: 197 FSSRLMNVNELTDMPVRETKIAGIPLTVRLYAD----DWTWNDVWYAFLLGGMSGTVVGL 252 R R + + I + V D D ++ F+ G+S V L Sbjct: 197 SDGRFYKT------AARASSMGEILVRVESDEDRLRTDLIATEIVALFV--GLSLFAVFL 248 Query: 253 LCYYL-MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPP 311 + Y + R R R + ++R +FYV YQ +VD Q R G E LLRW+HP G + P Sbjct: 249 VGYNAGFTPRQRLERLVRAGLRRNEFYVEYQAIVDLQTGRWVGAEALLRWKHPRLGLVMP 308 Query: 312 DAFINFAESQKMIVPLTQHLFELIARDAAELEK-VLPVGVKFGINIAPDHLHSESFKADI 370 FI E+ +I PLT+ ++A AEL+ P G + +N+AP H+ F DI Sbjct: 309 GKFIGEIETTSVIAPLTEF---VLATALAELQACAFPDGFRVNVNLAPKHIEMHCFPHDI 365 Query: 371 QKLLTSLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLE 429 L P F++VLEITER +LK + L + GV+ A+DDFGT +S L L+ Sbjct: 366 SSTLRRNPT-RFEVVLEITERGLLKRLADNHDNLMSLKTHGVKFAVDDFGTDNSNLALLQ 424 Query: 430 RFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGV 489 RF DY+KIDR F G +++ + LA +L++ VAEGVE EQ L E GV Sbjct: 425 RFDFDYIKIDRQF--TAGAANHDRQLVEGIAYLANKLDLTVVAEGVEEIEQREALKEIGV 482 Query: 490 NFMQGYWISRPLPLDDFVRWLKKPYT 515 F QG+ RP + +F R + T Sbjct: 483 RFAQGFLFQRPANILEFERMYRHSST 508 >UniRef50_A5W2V7 Diguanylate phosphodiesterase n=16 Tax=Pseudomonas RepID=A5W2V7_PSEP1 Length = 528 Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 144/513 (28%), Positives = 239/513 (46%), Gaps = 65/513 (12%) Query: 27 VSCLQFLVAWH-KHEVKYDTLITDVQ--KYLDTYFADLKSTTDRLQPLTLDTCQQANPEL 83 V C ++ W + E++ + T Q ++++ +L + L PLT +C+QA L Sbjct: 26 VMCGLAVMNWQVEREMQASSHATTRQALEHVEHILDNLSRAANSLLPLTDSSCEQAQLML 85 Query: 84 TARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPN 143 A+ + VR+ L + +C+S GE D P+N P ++ + ++ G + P Sbjct: 86 RAQVTRNAFVRSTNLFRHNNLYCTSLFGEFDEPVN---PGDYVDGK--LWLMDGNSVTPG 140 Query: 144 KPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMN 203 P +V Y + D+ + + G+ L+ RL+ Sbjct: 141 HPLLV--------------------------YRASDGDHGAITTVDGDHLLTAL--RLIG 172 Query: 204 VNE-----LTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAF-LLGGMSGTVVGLL---- 253 +E + D + + + ++ + + Y F + GG S G L Sbjct: 173 PDEELQIRVGDAWMGKDGVVHKGVSPAAPSANVLIGSTRYPFSVQGGYSADKQGQLLRSH 232 Query: 254 ------------------CYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGL 295 C + + P E+ A++ ++F +QPVV R G Sbjct: 233 YPGLLSLLLVLGALAALACRWQIRRATSPRAELDRALQADEFLPYFQPVVRKGDYRWAGA 292 Query: 296 EVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGIN 355 EVL+RW HP G + PD FI +AE IV +T+ L A+ A +L G G+N Sbjct: 293 EVLMRWHHPREGLVRPDLFIPYAEHSGQIVAMTRALLTHTAQSLAPYAGLLEDGFHIGVN 352 Query: 356 IAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIA 414 I DH S D + L P + LE+TER +++ T +LF LH++GV IA Sbjct: 353 ITADHCRDLSLLDDCRTFLQHFPPGRVVLTLELTERKLIEPTPVTLELFEKLHAMGVMIA 412 Query: 415 IDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEG 474 +DDFGTG S+L YL +F +DYLKID+ F+ IG + ++ +L++++ L+ +L++ VAEG Sbjct: 413 LDDFGTGQSSLNYLRQFKVDYLKIDQSFVAMIGADALSVHILESIIELSGKLDLGIVAEG 472 Query: 475 VETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 VET Q +L++ GV+F QGY +RP+P F+ Sbjct: 473 VETDLQRDYLAKHGVDFQQGYLFARPMPAAQFL 505 >UniRef50_D0Z7I3 EAL domain protein n=1 Tax=Edwardsiella tarda EIB202 RepID=D0Z7I3_EDWTE Length = 588 Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 146/448 (32%), Positives = 218/448 (48%), Gaps = 27/448 (6%) Query: 76 CQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAIL 135 C++ +P LT A +R +LVKD CS+ + L + P + K D +L Sbjct: 126 CEEISPHLTNMAIHLETIRAVLLVKDGIVTCSNLINQPIKSLRAIYPEMLSAK--DTLVL 183 Query: 136 PGTPMVPNKPAIVIWYR----NPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGN 191 ++ I++++R NP SG+ N+ + + R D +AL N Sbjct: 184 RAARLLNRGSPILLFWRPDQANP---TSGMVYIFNIATLSAFILAPRPPYVDYMAL---N 237 Query: 192 TALSTFSSRLMNVNELTDM------PVRETKIAGIPLTVRLY---ADDWTWNDVWYAFLL 242 A T M V TD P E + + P ++ L+ A D + L Sbjct: 238 VAGHTLRFNDMRVRAPTDAAEAETPPRLELRSSRYPFSISLFSPAARDLALQRLPRHIPL 297 Query: 243 GGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWR 302 + + +L Y + RM I AI+R Q + QP++ T++ R G+E+LLRW Sbjct: 298 ALLLFLLASILTYLASANRMSLAYPIAQAIRRRQLTLYCQPIIHTESGRCEGVEILLRWY 357 Query: 303 HPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLH 362 +P G P+ FI AE +IVPLT++L E +A F IN+A +H Sbjct: 358 NPRHGWTSPEIFIPLAEQNGLIVPLTRYLLEALAAQRHHFPH--DRDFYFSINVAAEHFA 415 Query: 363 SESFKADIQKL-LTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTG 421 DIQ L L P +++LE+TER L Q+ QL L +G+ +A+DDFGTG Sbjct: 416 QGKLALDIQNLWLRHRPQQ--RLMLELTERTRLPSQDYPQLHI-LREMGLSLALDDFGTG 472 Query: 422 HSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQA 481 HS+L YL+ + LKIDR F IG++ I + VLD ++ LA++L + V EGVE +QA Sbjct: 473 HSSLSYLQDLQPEMLKIDRAFCATIGSDAINARVLDLMIDLARQLRLRLVMEGVEQTQQA 532 Query: 482 RWLSERGVNFMQGYWISRPLPLDDFVRW 509 +L +R V MQGY +RP+PL DF W Sbjct: 533 DYLRQRQVYAMQGYLFARPMPLRDFPGW 560 >UniRef50_C5BG29 Cyclic diguanylate phosphodiesterase (EAL) n=2 Tax=Edwardsiella RepID=C5BG29_EDWI9 Length = 514 Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 104/266 (39%), Positives = 161/266 (60%), Gaps = 2/266 (0%) Query: 249 VVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGE 308 V G+ Y L+ P + A+++ QF QPVVD ++G E+L+RW+HP G Sbjct: 247 VFGVGTYRLVGQVNSPVFYLREALRQRQFIPYIQPVVDGADESLSGCEILMRWQHPQMGL 306 Query: 309 IPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKA 368 IPP+ FI AE +IV +T+ + ++ A + LP FG NI+ H + S Sbjct: 307 IPPNNFIPLAEDSGLIVAMTRDIMRQVSDYFAPRCRSLPTHFHFGFNISASHFNDLSLVE 366 Query: 369 DIQKLLTSLPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIY 427 + ++ + + A+ ++VLE+TER + + E T Q+F L +GV +A+DDFGTGHS+L Y Sbjct: 367 ECRRFIDAFEANPIRLVLELTERQRVPDGELTEQIFHKLRGLGVLLALDDFGTGHSSLAY 426 Query: 428 LERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSER 487 L+R+ D +KIDR F+ IG++ ++ ++D V+ LAKRL+M+T+AEGVE+ EQ + L Sbjct: 427 LQRYHFDIIKIDRSFVRMIGSDMLSGHIVDTVIALAKRLDMITLAEGVESGEQLQHLRGY 486 Query: 488 GVNFMQGYWISRPLPLDDFVR-WLKK 512 ++++QGY P PL DF R WLK Sbjct: 487 RLDYLQGYLFGCPQPLPDFTREWLKS 512 >UniRef50_Q1VEI6 Putative uncharacterized protein n=1 Tax=Vibrio alginolyticus 12G01 RepID=Q1VEI6_VIBAL Length = 511 Score = 198 bits (504), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 151/515 (29%), Positives = 258/515 (50%), Gaps = 38/515 (7%) Query: 12 LLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPL 71 ++L+ IV + +S LQ E D + V K +D+ F + +R L Sbjct: 17 IILSLIVLQLSYKTFLSSLQ--------EQALDRADSIVHK-IDSIFFYAEEANERTLSL 67 Query: 72 TL--DTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKN 129 L + C +A+ EL AA VRT + D C+S G+ ++ LD Sbjct: 68 ALRGNNCDEASYELRKIAASIPYVRTTNISVDGYINCTSLWGDKIFEDDDERYVLD---- 123 Query: 130 VDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALN----LNLTPSLFYSSRQEDYDGV 185 + ++PG+ + N P IV L N AAL+ L+L +LF S+ D Sbjct: 124 -KLLLMPGSQVAQNHPLIV------LRTNKDNMAALSGIDALHLRQTLFSSTL--DSHLA 174 Query: 186 ALIIGNTALSTFSSRLMNVNELTDM-PVRETKIAGIPLTVRL-YADDWTWNDVWY--AFL 241 +G L + L+N + + V +K P ++ + ++ W+ F Sbjct: 175 YFSLGKIWLDQ-NGALLNRDPTKQLVGVESSKSDFFPYSISVGFSYSSLQEAFWHEKKFY 233 Query: 242 LGGMSGTVVGLLCYYLMSVRMRP---GREIMTAIKREQFYVAYQPVVDTQALRVTGLEVL 298 + + + L YY RP E+ AIK+++F Q VV+ + + G+E+L Sbjct: 234 ILLILLIQLSFLVYYWWHT-TRPQSLDEELKRAIKKKEFVPYAQAVVNAKTREIEGVEIL 292 Query: 299 LRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAP 358 +RW HP+ G + PD FI AE +IVP+T+ L + A+ + L G+NI+P Sbjct: 293 MRWLHPIQGVVRPDLFIPQAEESGLIVPMTELLLKETAKQLCDYSSHLTKPFHVGVNISP 352 Query: 359 DHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQ-LFAWLHSVGVEIAIDD 417 H + ++ + ++ + +VLE+TER++L E+T+ LF+ L +G +IAIDD Sbjct: 353 QHCRGMGLANECKEFIQTVNQENIMLVLELTEREVLDFSESTEVLFSDLKKLGCKIAIDD 412 Query: 418 FGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVET 477 FGTGHS+L L++F ++Y+KID+ F+ +G+ + ++++ + LA RL++ VAEGVET Sbjct: 413 FGTGHSSLANLQKFQVNYIKIDQMFVQGVGSNPTSRHLVESTIELANRLSLEIVAEGVET 472 Query: 478 PEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 EQ +L+ V ++QG+ S+P+PL++F++ K Sbjct: 473 EEQQEYLANYHVKYLQGFLFSKPIPLEEFLQEYGK 507 >UniRef50_A6AP35 Protein rtn n=4 Tax=Vibrionales RepID=A6AP35_VIBHA Length = 506 Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 101/260 (38%), Positives = 161/260 (61%), Gaps = 4/260 (1%) Query: 252 LLCYYLMSVRMRPGR---EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGE 308 L YL+ + RP EI A++ ++F QP++++ + G+E+LLRW+HPV G Sbjct: 241 LFALYLLWLSRRPSNLYLEIERAMENKEFVPYAQPILNSANREIQGIEILLRWQHPVQGT 300 Query: 309 IPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKA 368 + PD FI AE +I+P+T L A++ + LP G+NI+P H + + Sbjct: 301 VRPDLFIPKAERSGLILPITHQLMINTAKEIRLWKDKLPKPFHVGVNISPQHCSKGTLVS 360 Query: 369 DIQKLLTSLPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIY 427 Q+ + + + +VLE+TER+ L + T ++F + S+G +IAIDDFGTGHS+L+ Sbjct: 361 ACQEFIDIVDSKDVTLVLELTEREALNYCDLTDEIFTQIKSMGCKIAIDDFGTGHSSLVN 420 Query: 428 LERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSER 487 L + LDYLKID+ F+ IG +TIT +L ++TL+ L++ VAEGVET QA +L ER Sbjct: 421 LRKVDLDYLKIDQTFVRDIGVDTITGHLLQNMITLSHDLSLDVVAEGVETEFQAEYLKER 480 Query: 488 GVNFMQGYWISRPLPLDDFV 507 GV+++QG+ ++P+PL +F+ Sbjct: 481 GVSYLQGFLFAKPMPLKEFL 500 >UniRef50_A0KH05 EAL domain protein n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KH05_AERHH Length = 513 Score = 194 bits (493), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 103/254 (40%), Positives = 150/254 (59%), Gaps = 1/254 (0%) Query: 264 PGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKM 323 P +E+ AI +++F QP+V +Q ++ G EVL+RW+H G I PD FI AE + Sbjct: 260 PTQELRRAIIKQEFVPYLQPIVVSQNGQLHGCEVLMRWQHHRQGLIRPDLFIPLAEESGL 319 Query: 324 IVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQ 383 I+ +TQ L + + A LP F NI H S D + L + A+ Sbjct: 320 IILMTQTLMQQVRLQFAPHAAALPPRFHFSFNICARHCQQLSLLDDCRSFLAAFTANPIT 379 Query: 384 IVLEITERDMLKEQEATQ-LFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGF 442 +VLE+TER+++ T+ LF L +GV I +DDFGTGHS+L YL++F +DYLKID+ F Sbjct: 380 LVLELTERELITPNHLTERLFEELRQMGVRIGLDDFGTGHSSLTYLQQFHVDYLKIDQSF 439 Query: 443 INAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 + IGT ++ +LD+ ++LA RL + T+AEGVET EQA +L ER V+++QGY RPL Sbjct: 440 VAMIGTNALSRHILDSTISLATRLGLQTIAEGVETQEQADFLVERQVDYLQGYLYGRPLT 499 Query: 503 LDDFVRWLKKPYTP 516 F++ L P Sbjct: 500 PQQFLQQLSPTPAP 513 >UniRef50_C9PEG9 Rtn protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PEG9_VIBFU Length = 511 Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 147/483 (30%), Positives = 222/483 (45%), Gaps = 55/483 (11%) Query: 48 TDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANP-----------ELTARAAFSMNVRTF 96 T+V + LD F+ L S T L P D+CQ P LTA + Sbjct: 53 TNVLEQLDHLFSQLDSATQHLVPNLNDSCQSLKPLLMEEILKIPGGLTATKPLHLG---- 108 Query: 97 VLVKDKKTFCSSATGEMD-IPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPL 155 +C+S G MD +P+ P++ ++ V I P + ++YR+ Sbjct: 109 --------YCNSLRGFMDRLPVTVNGPSVSLDTGV---IEP----------VSVYYRSQS 147 Query: 156 LKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALST-FSSRLMNVNELTDMPVRE 214 L L++ L+ ++ L++ + L+T +S + EL P + Sbjct: 148 L-------VYELSMNYFLYQLKINPEFIKPTLLLADKELTTGYSQSRLIKGELFPSP-KY 199 Query: 215 TKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGR---EIMTA 271 I +Y + V+Y + T+ CY +P R E+ Sbjct: 200 NYAMRIQYDQTMYFWELLQRVVYYLVI----PFTLYLFACYQFYRFLCQPDRLASELARG 255 Query: 272 IKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHL 331 + +QF QP+ D V G E+L+RW HP G I P FI+ E + LT+ L Sbjct: 256 LAHQQFKPYIQPIFDCGGSLVGG-EILVRWHHPTRGVIGPYEFISILERGGLSHRLTESL 314 Query: 332 FELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITER 391 E A A K LP G NI+ + L + + HH Q++LE+TER Sbjct: 315 MEQTALQLAPYTKALPDGFHLSFNISAEQLTDSKIVQCCHRFRQVVDTHHMQLILELTER 374 Query: 392 DMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTET 450 + E E + L + V I+IDDFGTGHS+LIY + F DYLKID+ F++ IG Sbjct: 375 EQAIEAVELMDTYQALKAENVLISIDDFGTGHSSLIYFQMFKADYLKIDKSFVDLIGENE 434 Query: 451 ITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 +++ +++ VL LA+RLN+ TVAEGVE PEQ ++L+ GV+F QGY S P+ LDDF+ Sbjct: 435 LSNHIVNNVLDLARRLNIPTVAEGVERPEQLQYLTVHGVDFFQGYLFSTPITLDDFIEDY 494 Query: 511 KKP 513 +P Sbjct: 495 CQP 497 >UniRef50_B4T8H8 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=39 Tax=Enterobacteriaceae RepID=B4T8H8_SALHS Length = 516 Score = 191 bits (484), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 142/452 (31%), Positives = 212/452 (46%), Gaps = 12/452 (2%) Query: 71 LTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNV 130 L +C EL+ AF+ VR +++ CS TG + L L + + Sbjct: 55 LAESSCTDTLKELSRTRAFTPYVRDIGFLENGDITCSFVTGTERYHFSRL-AGLSLPASY 113 Query: 131 DMAILPGTPMVPNKP-AIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALII 189 L + P +V+ Y + N F ++ L E +L Sbjct: 114 PERWLRSIGSMAEGPDRLVVVYVKKVAANKAAFVIVDSQYVQELMEILAAERASAFSLTF 173 Query: 190 GNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV 249 G T ++ L LT + + W + F+ + +V Sbjct: 174 GAGEAITSAATLRGKAFLTQRFTSTDHTIQLMVRTPFSTLSAYWLQNLFIFIPLSLCLSV 233 Query: 250 VGLLCY---YLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVA 306 +L Y YL R+ REI I +F V YQPV + + G+E L+RW P Sbjct: 234 GMMLFYRRWYLK--RLSLAREIARGITHNEFTVHYQPVFNVEDGSCGGVEALMRWPQPDG 291 Query: 307 GEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESF 366 I PD FI AE++ MI+PL++HLFELIA D + + +NI+P HL + F Sbjct: 292 RFITPDIFITAAENEGMIIPLSRHLFELIAHDV--INWTVSDDFYISVNISPAHLMDDGF 349 Query: 367 KADIQKLLTSLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSAL 425 DI+ L T L ++LE+TER ++ E + + + L GV IAIDDFGTG+ +L Sbjct: 350 IQDIEALRTRLGT--ITLMLELTERSLIVEPSQVAEKLSTLREKGVLIAIDDFGTGYCSL 407 Query: 426 IYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLS 485 YL++ +D LKIDR FI+ I T + PVLD ++TL++RL + VAEGV T Q R++ Sbjct: 408 SYLQQLPVDSLKIDRTFIDTIDTSSDDVPVLDTIITLSQRLGLNVVAEGVSTQHQLRYIL 467 Query: 486 ERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQ 517 GV F+QG+ +RP+ +DF+ WL K Q Sbjct: 468 SHGVGFVQGFLYARPMGANDFMSWLGKSAQRQ 499 >UniRef50_Q2L0M3 Putative signaling protein (Fragment) n=1 Tax=Bordetella avium 197N RepID=Q2L0M3_BORA1 Length = 519 Score = 187 bits (475), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 132/462 (28%), Positives = 230/462 (49%), Gaps = 27/462 (5%) Query: 64 TTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPA 123 D + PL TC +A P L R+ +L++ ++ +C AT + N Sbjct: 67 AVDMMLPLLRGTCAEARPVLVRTLNTKPYFRSLLLLQGQQPYC--ATNLVVARANTPSWR 124 Query: 124 LDINKNVDMAILPGTPMVPNKPAIVIWY-----RNPLLKNSGVFAALNLNLTPSLFYSSR 178 + + ++ G P + +PA+++ R + G + L+ +L Sbjct: 125 WEAPPGRWLRLVDGMPFMRERPALLVGASGHGGRRAVAVVDGQYLQEMLDSVAALGGHRV 184 Query: 179 QEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWY 238 + G ++ A++ +M T AG+P+++ + + W Sbjct: 185 EFKMQGGGNLLSRPAVAGGDEGVMAREAFTS--------AGVPVSIEVMLPESEVIKEWT 236 Query: 239 AFLLG--GMSGTVVGLLCYYLMSVRMRPGR---EIMTAIKREQFYVAYQPVVDTQALRVT 293 L+G ++ V L+ + L ++++ +I A++ +F++ YQP+ +++ R Sbjct: 237 RILIGFLPLALLVSCLMVWALRHLQLQQTSVQDQIRRAMRAGEFHMEYQPIYSSKSGRCE 296 Query: 294 GLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFG 353 G E L+RWRHP AG I P+ FI AE++ IVPLT+H LIA+D ++ LP G Sbjct: 297 GAEALMRWRHPGAGAISPEVFIAAAEAEGAIVPLTRHALGLIAQDLPQMN--LPAGFHLS 354 Query: 354 INIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSV---G 410 +N+A +HL F +D+ + +VLE+TER ++ ++A Q + + +V G Sbjct: 355 VNLAAEHLLHREFVSDVAAFAARIAPWSPHLVLELTERSLV--EDAAQALSNIRAVRTSG 412 Query: 411 VEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLT 470 V IAIDDFG+G+ +L YL++F +DYLK+D+ FI I SP+LD +L LA+RL + Sbjct: 413 VSIAIDDFGSGYCSLAYLQQFPVDYLKVDKTFIVGIENAQQESPILDMILALARRLELEV 472 Query: 471 VAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 VAEGV T Q +L R V ++QG+ ++ P+ F W ++ Sbjct: 473 VAEGVSTRGQLDYLLARDVAYVQGFLVAEPMRAQVFADWYRE 514 >UniRef50_A9AQW1 Diguanylate phosphodiesterase n=16 Tax=Burkholderia cepacia complex RepID=A9AQW1_BURM1 Length = 588 Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 143/474 (30%), Positives = 221/474 (46%), Gaps = 26/474 (5%) Query: 42 KYDTLIT-DVQKYLDTYFADLKST-TDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLV 99 +++ L+ D+ +D L+S D L PL C+Q L +R LV Sbjct: 111 RHEGLVAGDIAASVDRILNSLRSRHADVLPPLVGRPCRQIFAPLAEAETRLRYLRAIALV 170 Query: 100 KDKKTFCSSATGEMDIPLNELIPALDINKNVD---MAILPGTPMVPNKPAIVIWYRNPLL 156 + CSSA G +D PL+ + A D +A+L TP P +V + Sbjct: 171 NGNRLTCSSALGAIDAPLDAYVRAPAATPAADGTRIALLSETPYQRGIPVLVAF--RATA 228 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 +++GV + + S + L I R + + R T Sbjct: 229 RDAGVLYLIEGDYVADALAHSGSYGAESATLSIAGAGRLDHRGRFIPASRAVRP--RGTA 286 Query: 217 IAGI--PLTVRLYADDWTWNDV--WYAFLLGGMSGTVVGLL-CYYLMSVRMRPGREIMTA 271 IA P TV + A + V Y L G ++ V L+ YL++ P R ++ A Sbjct: 287 IASRAWPFTVSVVASAQYVSQVERRYRLLFGTIALLVDALVVAAYLIATA--PRRLLLKA 344 Query: 272 I----KREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + +R +F+V YQP+V+ + R G+E LLRW HP G I P AF+ ES ++ + Sbjct: 345 VGDALRRNEFHVVYQPIVEIETRRTVGVEALLRWHHPKWGAISPTAFVPQVESSAVLPRV 404 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 T+++ + L +P ++ IN+AP L F + + + + LP F +VLE Sbjct: 405 TEYVLRTAVSELTALAPAMP--LRIAINVAPKDLERPRFMSIVDEAIRRLPP-GFTLVLE 461 Query: 388 ITERDML-KEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TER +L K T +FA L + GV+ AIDDFGT HS L L RF DY+KIDR F+ + Sbjct: 462 VTERVLLEKNPRTTAMFAALRAKGVKFAIDDFGTQHSNLDMLSRFPFDYVKIDRQFVAQL 521 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRP 500 + ++ +++ + +A + VAEGVET EQ R L G+ + QGY RP Sbjct: 522 --DGGSARLIEGIAAVAHHYGLKIVAEGVETEEQHRALHAVGIQYAQGYLYRRP 573 >UniRef50_Q7BQS9 Sea19 n=1 Tax=Serratia entomophila RepID=Q7BQS9_9ENTR Length = 408 Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 99/249 (39%), Positives = 149/249 (59%), Gaps = 2/249 (0%) Query: 264 PGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKM 323 P ++ A++++QF +QP+V + +TG EVL+RW+HP G + P FI AE + Sbjct: 155 PLAQLRRALRKQQFMPYFQPIVRGGSGELTGAEVLVRWQHPKMGVLSPANFIALAEESGL 214 Query: 324 IVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQ 383 IVP+T+ L + + L LP FG NI+ H + + D + L + H + Sbjct: 215 IVPMTRDLMAQVRECFSPLANRLPGDFHFGFNISAYHFNDINLIDDCRDFLKAFGLHRVK 274 Query: 384 IVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGF 442 +VLE+TER +L E T + LH +GV IA+DDFGTG+S+L YL+ +D LKIDR F Sbjct: 275 LVLELTERQVLVSNELTIHIIQSLHQLGVLIALDDFGTGYSSLSYLQDHQIDILKIDRRF 334 Query: 443 INAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 I+ IG +T++ ++D +L+LA+ L++ TVAEGVET Q +L +R +QGY RP Sbjct: 335 ISQIGADTLSCHIVDHLLSLAECLDITTVAEGVETEAQRAYLCQRQSVHLQGYLFGRPES 394 Query: 503 LDDFV-RWL 510 D F+ +WL Sbjct: 395 QDLFLHQWL 403 >UniRef50_B9Z2J3 Diguanylate phosphodiesterase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z2J3_9NEIS Length = 343 Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 96/245 (39%), Positives = 153/245 (62%), Gaps = 3/245 (1%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 EI +++ +F+V YQP+V Q+ G+EVL RWRHPV G IP FI AE +IV Sbjct: 80 EIAQGLRKREFFVHYQPIVTAQSGHCIGVEVLARWRHPVQGFIPSQLFIPAAEEAGLIVA 139 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 LT++L + + ++ +LP G G+NI+ HL + D + LL+ L H Q+VL Sbjct: 140 LTRYLLRCVGHELGQM--MLPAGFVVGVNISASHLTTRDIIEDCRLLLSVLKDKHIQLVL 197 Query: 387 EITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 E++ER L+E +E+ ++ L ++GV++A+DDFG GH+ YL+ + DYLK+++G+++A Sbjct: 198 EVSERVALEEHEESLKVVRELKAMGVQLALDDFGAGHADRHYLQTWGFDYLKVEKGYVSA 257 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 IG E +LD +L A +L + + +GVET Q +L+ +G F+QG++ RP+ L+ Sbjct: 258 IGKEGFRGNILDDILVNATQLGLKVMIKGVETQGQQSYLNAKGFQFLQGFFFGRPMTLNH 317 Query: 506 FVRWL 510 F RWL Sbjct: 318 FRRWL 322 >UniRef50_Q1Z832 Putative uncharacterized protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z832_PHOPR Length = 504 Score = 181 bits (460), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 95/250 (38%), Positives = 150/250 (60%), Gaps = 3/250 (1%) Query: 256 YLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFI 315 YL S E+ A+K +F++ YQP +D + V GLE L+RW+HPV G I PD FI Sbjct: 239 YLFSRERSMYTEVKLALKMREFFLHYQPHIDASSGSVFGLEALIRWQHPVRGVIYPDVFI 298 Query: 316 NFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLT 375 E +I +T ++ E D +EK L G+ GIN+ P + + + ++K Sbjct: 299 PLMEEYGLINEMTDYVLETAYHDL--VEKDLTAGLHLGINVPPGYFSDKKNISLLKKYKQ 356 Query: 376 SLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDY 435 ++ LEITER L + A + + L + G++I IDDFGTG ++L LE+ +DY Sbjct: 357 KFDNIGIRLGLEITERQFLDDL-ARESISHLRTAGIDILIDDFGTGQTSLSVLEQTNIDY 415 Query: 436 LKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGY 495 LKID+ F+++IG E++ +P+L+A++ LAK LN+ +AEGVET QA++L + V QGY Sbjct: 416 LKIDKCFVDSIGHESVNAPILNAIINLAKELNVGLIAEGVETEVQAQYLLAQEVTLHQGY 475 Query: 496 WISRPLPLDD 505 ++P+P+++ Sbjct: 476 LYAKPMPIEE 485 >UniRef50_Q31S15 EAL n=2 Tax=Synechococcus elongatus RepID=Q31S15_SYNE7 Length = 525 Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 95/265 (35%), Positives = 157/265 (59%), Gaps = 1/265 (0%) Query: 237 WYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLE 296 W +G ++G ++ L Y + ++ I TAIKR +F++ YQP+V+ Q G E Sbjct: 242 WIIVPVGILAGIILWLSVIYFLRGQLALPAVIKTAIKRREFFLTYQPIVNLQTGDWVGAE 301 Query: 297 VLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINI 356 L+RW+ P + PD FI AE +I +T+++ E ++R+A P GIN+ Sbjct: 302 ALVRWKRPDGKTMAPDIFIPVAEDSGLIQLITEYIVETLSREAIGFFDEFP-RFHIGINL 360 Query: 357 APDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAID 416 + LH+ + ++K+ + A +++E TER + A + + L + G+++AID Sbjct: 361 SAADLHTPQTVSLMRKVAKATSAKPGSLIVEATERGFTDPKLANGVISSLRADGIQVAID 420 Query: 417 DFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVE 476 DFGTG+S+L YLE LDYLKID+ F++ IG +T TS V+ ++ +AK L+++ VAEGVE Sbjct: 421 DFGTGYSSLSYLENLELDYLKIDKSFVDTIGRDTATSNVVTHIIEIAKTLDLMMVAEGVE 480 Query: 477 TPEQARWLSERGVNFMQGYWISRPL 501 T QA +L RGV + QG++ ++P+ Sbjct: 481 TELQANFLRNRGVQYAQGWFFAKPM 505 >UniRef50_B2JUW5 Diguanylate phosphodiesterase n=1 Tax=Burkholderia phymatum STM815 RepID=B2JUW5_BURP8 Length = 529 Score = 180 bits (457), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 130/466 (27%), Positives = 219/466 (46%), Gaps = 24/466 (5%) Query: 46 LITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTF 105 ++ + + LD+ + S L L C L+ + + VR+ LV ++ + Sbjct: 58 MVASIDRILDSVISRAHSG---LATLPGRPCPLVEHRLSELQTYVLYVRSVNLVANQNIY 114 Query: 106 CSSATGEMDIPLN---ELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVF 162 CSSA G +D+PL L PA +++ ++ GTP P +P + ++ P K++G+ Sbjct: 115 CSSALGSIDMPLAAYLSLAPA-----RIELDLIAGTPQQPREPVMPLYV--PTSKDTGLL 167 Query: 163 AALNLN-LTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIP 221 + L +L + R E V ++ AL + + + R + Sbjct: 168 YVVEARYLADTLAHGVRYEAGQVVLVVSNARALDAYGEVISAESAAKWKGTRASSARWAF 227 Query: 222 LTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKRE----QF 277 V + A + W LL + +V LL + P R +++A++R Q Sbjct: 228 SIVVVAAPAFVTQTHWKYGLLASAAAILVNLLIAAAYLIAFAPRRLLLSAVRRALKHGQL 287 Query: 278 YVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIAR 337 + AYQPVV+ R+ G+E L+RW HP G + P AF+ E ++ +T+ + Sbjct: 288 HFAYQPVVEIATRRIMGVEALIRWTHPRWGAVSPAAFMTEVERSSLLASVTRFALQRATE 347 Query: 338 DAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQ 397 + ++ P ++ +N+AP L + F AD+ + +LPA +VLE+TER ++ + Sbjct: 348 EIMRKTELRP--LRIAVNVAPMDLERKDFVADVLAVHATLPA-DITLVLEVTERFLIDKH 404 Query: 398 EATQ-LFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVL 456 T +F L + GV AIDDFGT HS L L RF DY+KID F+ + + ++ Sbjct: 405 PRTDVIFNLLKAQGVRFAIDDFGTQHSNLDLLGRFPFDYVKIDGEFVRQVDKQ--GGELI 462 Query: 457 DAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 A+ ++K M +AEGVET Q L G+ + QGY RP+P Sbjct: 463 RAIAAVSKHYGMEVIAEGVETQAQHEALRSLGIPYGQGYLYQRPVP 508 >UniRef50_A6AUF8 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=7 Tax=Vibrio RepID=A6AUF8_VIBHA Length = 489 Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 132/459 (28%), Positives = 214/459 (46%), Gaps = 42/459 (9%) Query: 63 STTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIP 122 T +R L + C+ L F N+ ++VK + CSS G + P ++ I Sbjct: 55 ETENRTALLRPERCEVLQQNLM----FERNIDEMLIVKGDQIICSSKLGAISRPADDYIQ 110 Query: 123 AL--------DINKNVDMAILPGTP--MVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPS 172 +N D + T P A+ I R+ G L L T Sbjct: 111 MYRPETLSLGHVNGYPDQVLFLSTKSEAQPEYQAVTIVDRDYFGATIGYRNDLRLKRT-- 168 Query: 173 LFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWT 232 A+ +G+ + S++ NE+ G+ + A D+ Sbjct: 169 -------------AIFVGDESAPMDSTK-DGENEVALNHSTSFDYEGL-----IEASDYY 209 Query: 233 WNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGR----EIMTAIKREQFYVAYQPVVDTQ 288 +++LL + +V +L+ + P R E+ AI++ + + YQP VD Q Sbjct: 210 VEQQRFSYLLSSIPILLVFYFLIFLVRRFIDPQRNMVSELKKAIRKRELKLYYQPQVDAQ 269 Query: 289 ALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPV 348 +V G E L+RW H + G I PD F+ AE ++ LT + + D ++++ P+ Sbjct: 270 TGKVFGYEALVRWPHKLRGFISPDEFVPVAEESGLVESLTDFVLDKACEDFSKVKLEEPI 329 Query: 349 GVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHS 408 G+N+ P +L I+ + +L H+ ++ +EITER ++ + A Q A L Sbjct: 330 --HLGVNVPPGYLSDSHVIRKIENIHRTLKQHNVELGIEITERQLI-DSNAIQHIAALRV 386 Query: 409 VGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNM 468 G+++ IDDFGTG +AL L+ +DYLKID+ F++ IG E++ S VL A++ LA L++ Sbjct: 387 HGIQVLIDDFGTGQTALAVLQHMKVDYLKIDKCFVDTIGIESVNSSVLHAIVRLAGDLSV 446 Query: 469 LTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 VAEGVET EQA L GVN QGY+ ++PLP + V Sbjct: 447 ELVAEGVETKEQADHLKALGVNIHQGYFYAKPLPYAEVV 485 >UniRef50_P75995 Uncharacterized protein ycgG n=33 Tax=Enterobacteriaceae RepID=YCGG_ECOLI Length = 507 Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 99/252 (39%), Positives = 139/252 (55%), Gaps = 2/252 (0%) Query: 264 PGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKM 323 P + AI + YQPVV+ + + G+EVL RW+ P G I P AFI AE + Sbjct: 249 PEEILRRAINNGEIVPFYQPVVNGREGTLRGVEVLARWKQPHGGYISPAAFIPLAEKSGL 308 Query: 324 IVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQ 383 IVPLTQ L +AR + LP G GIN + H+ S +F + S Sbjct: 309 IVPLTQSLMNQVARQMNAIASKLPEGFHIGINFSASHIISPTFVDECLNFRDSFTRRDLN 368 Query: 384 IVLEITERDMLKEQEA-TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGF 442 +VLE+TER+ L E+ Q LH G IA+DDFGTG+S L YL +DY+KID F Sbjct: 369 LVLEVTEREPLNVDESLVQRLNILHENGFVIALDDFGTGYSGLSYLHDLHIDYIKIDHSF 428 Query: 443 INAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 + + + ++ +LD VL LA++L++ VAEGVET EQ +L++ + F QGY+ +P+ Sbjct: 429 VGRVNADPESTRILDCVLDLARKLSISIVAEGVETKEQLDYLNQNYITFQQGYYFYKPVT 488 Query: 503 LDDFVR-WLKKP 513 D V+ L KP Sbjct: 489 YIDLVKIILSKP 500 >UniRef50_C9PD80 Rtn protein n=2 Tax=Vibrio RepID=C9PD80_VIBFU Length = 501 Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 120/421 (28%), Positives = 205/421 (48%), Gaps = 16/421 (3%) Query: 89 FSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIV 148 F +R ++V D CSS GE+ ++ P I NV + L G P K ++ Sbjct: 72 FESILREMLIVNDGTITCSSKRGELSRDISRYYPNGQIKSNVVLFDLEGDPA---KRTLL 128 Query: 149 IWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELT 208 + + GV + + N +A + +T +++ VN Sbjct: 129 VIDADAHDTTHGVISVVEKNYIAGRLGYHTDNRIKKLAFKLHDTTYP-YNASFNTVNRSV 187 Query: 209 DMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGM----SGTVVGLLCYYLMSVRMRP 264 K + L A D + +LLG + + +V+ + + R Sbjct: 188 -----VAKSDRYSFLLMLEASDPYVTERLTFYLLGALPVSFAISVLITILLFFFGGRSSL 242 Query: 265 GREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMI 324 ++ ++R + ++AYQPVV ++ + G E L+RW +P G + PD FI AE +I Sbjct: 243 VDDLRKGLERRELFMAYQPVVRSEPCEIKGFEALVRWVNPKLGFVGPDNFIPIAEEFGLI 302 Query: 325 VPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQI 384 LT ++ + + RD ++ + L G+NI P +L +++ + + Q+ Sbjct: 303 NKLTDYVLDSVLRDWSKAK--LMECHHMGVNIPPSYLLDPVCVEKLKQYAKAYKDINLQL 360 Query: 385 VLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFIN 444 + EITER +L EQ Q+ L + G+ +AIDDFGTG +AL L+ D+LKID+ F++ Sbjct: 361 IAEITERQLLDEQ-GQQVLHELRNSGILVAIDDFGTGRTALSVLQNIEFDFLKIDKCFVD 419 Query: 445 AIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLD 504 IG E++ +PVL+A++ L+ +L + VAEGVET Q+ +L E+GV + QGY+ ++PL Sbjct: 420 TIGVESVNAPVLNAIIDLSHQLQVEIVAEGVETKVQSCYLKEKGVQYQQGYYYAKPLSFS 479 Query: 505 D 505 D Sbjct: 480 D 480 >UniRef50_Q5ZVH1 Rtn protein n=5 Tax=Legionella RepID=Q5ZVH1_LEGPH Length = 532 Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 102/286 (35%), Positives = 156/286 (54%), Gaps = 11/286 (3%) Query: 234 NDVWYAFLLGGMSGTVVGLLCYYL----MSVRMRPGREIMTAIKREQFYVAYQPVVDTQA 289 ++ WY+ + + + + Y L M+ R I AIK E+FY YQP+ D Sbjct: 246 HNFWYSQTITILIVLICSFILYALIKNMMTKRYSLQGAIKLAIKNEEFYPVYQPLFDCDE 305 Query: 290 LRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVG 349 R TG+EVLLRW + + I PD FI AE+ +IVP+T + E+ + E +L Sbjct: 306 ERFTGVEVLLRWENEDSQIIMPDFFIAEAEATGLIVPITLQIIEIAFK---EFRSLLEER 362 Query: 350 VKF--GINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQL--FAW 405 F NI+ H F KL+ QI+ EITER++L + + T + Sbjct: 363 SYFHLAFNISALHFTDSVFFNQFHKLIEKYNISPHQIIFEITERELLDKNDTTFINKMQE 422 Query: 406 LHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKR 465 L G +A+DD+GTGH+++ YL+ F +YLKID+ F+ AIG+ I + DA++ +AK Sbjct: 423 LRQTGFSLAVDDYGTGHASISYLQHFPFNYLKIDKLFVQAIGSNDIIESLNDAIIQMAKG 482 Query: 466 LNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 LN++T+AEGVET +QA +L+ GV QG++ S+ L + + LK Sbjct: 483 LNLVTIAEGVETKDQANYLANNGVRLQQGWYYSKGLSIAELTALLK 528 >UniRef50_D1RIS6 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1RIS6_LEGLO Length = 530 Score = 177 bits (449), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 108/308 (35%), Positives = 163/308 (52%), Gaps = 8/308 (2%) Query: 210 MPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGRE-- 267 + R I+GI +TV + W+ +L + V+ +L Y+L+ + Sbjct: 221 VSTRLNSISGIIITVVENRRNII-RSFWFKEILLALDILVLSILLYFLLKQILNKYYSLH 279 Query: 268 --IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIV 325 I AIK+EQFY YQP+ D + +G EVLLRW++ I PD FI AE +I+ Sbjct: 280 GAIKKAIKKEQFYPVYQPLFDARNNVYSGAEVLLRWKYYQDTIIMPDLFIQEAEDTGLII 339 Query: 326 PLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIV 385 P+T + E ++ EL P N+ H F KL+ QI+ Sbjct: 340 PITLQIVETAFKETKELLYGSP-SFHLAFNLCAYHFTDTLFFDQFHKLVDQYSISPNQIL 398 Query: 386 LEITERDML--KEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFI 443 LEITER +L ++ + L G +AIDD+GTGHS++ YL+ + ++LKID+ FI Sbjct: 399 LEITERYLLDVNDKSFIKKMLALREAGYSLAIDDYGTGHSSISYLQYYPFNFLKIDKIFI 458 Query: 444 NAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPL 503 AIG++ IT + DA++ LAK++N+ +AEGVET EQ +L E V+F+QG+ S+ L + Sbjct: 459 QAIGSKAITETLNDAIINLAKKINLTIIAEGVETKEQVNYLLENDVHFLQGWHFSKALSI 518 Query: 504 DDFVRWLK 511 D LK Sbjct: 519 DQLTDLLK 526 >UniRef50_B1XXA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XXA0_LEPCP Length = 771 Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 99/247 (40%), Positives = 140/247 (56%), Gaps = 7/247 (2%) Query: 266 REIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIV 325 R++ AI ++Q + YQP VD Q VTG E LLRWRHP G IPP FI AE +I+ Sbjct: 496 RDLREAIDKQQLSLHYQPKVDLQTWEVTGFEALLRWRHPEHGNIPPSEFIPVAEDSGLIL 555 Query: 326 PLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIV 385 P+ + + + AA P ++ INI+P + +++ + + L + ++ Sbjct: 556 PIGEWVLTQACQQAARW----PAPMQVAINISPVQVMAQNLPEAVGRALKASGLAPRRLE 611 Query: 386 LEITERDMLKEQEAT--QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFI 443 LEITE + E T +L A L VGV+IA+DDFGTG+S+L YL RF D LKIDR F+ Sbjct: 612 LEITESVFINETRGTVDRLHA-LRKVGVQIALDDFGTGYSSLAYLRRFPFDTLKIDRAFV 670 Query: 444 NAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPL 503 + ++ +L LAK L M TVAEGVE P QA L G + +QG+ +SRP+P Sbjct: 671 REVLLSRDARAIVRNILALAKSLRMSTVAEGVEEPAQASVLGNEGCDLVQGFLVSRPMPA 730 Query: 504 DDFVRWL 510 D+ +L Sbjct: 731 DEVTGFL 737 >UniRef50_A6Q5V4 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q5V4_NITSB Length = 793 Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 87/251 (34%), Positives = 157/251 (62%), Gaps = 8/251 (3%) Query: 266 REIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIV 325 +E+ AI++ + + QP + + +V G E L+RW HP G IPP FI AE +I+ Sbjct: 546 QELKKAIEKNELMLYLQPKISVRTKKVEGFEALIRWNHPTRGFIPPSKFIPLAEESALII 605 Query: 326 PLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQ-- 383 PLT+ +F+ + R +L++ + INI+ H ++ I+++ T++ + Q Sbjct: 606 PLTEWIFQEVDRLLDQLQQN-GIESPIAINISARHFATDKL---IEQITTNIKKEYIQKG 661 Query: 384 -IVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRG 441 I LE+TE ++++ +A LHS G+++A+DDFGTGHS+L YL++ +D +KID+ Sbjct: 662 LIELEVTESAVMEDINKAMHYLQKLHSFGIKVALDDFGTGHSSLQYLKKLPIDTIKIDKT 721 Query: 442 FINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPL 501 FI+ I + ++++ + +A +L M TVAEGVET EQA++L + G++++QGY+ ++P+ Sbjct: 722 FIDHIINDNKDQAIVESTIEMADKLGMDTVAEGVETKEQAQFLEKIGIDYIQGYYYAKPM 781 Query: 502 PLDDFVRWLKK 512 P ++ + +L+K Sbjct: 782 PFEEMLEFLQK 792 >UniRef50_Q7W9Y7 Putative membrane protein n=2 Tax=Bordetella RepID=Q7W9Y7_BORPA Length = 524 Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 90/246 (36%), Positives = 143/246 (58%), Gaps = 1/246 (0%) Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 I + ++R +FY+ YQP+V+ R G E L+RWR I PD FI+ AE +I + Sbjct: 277 IRSGLRRNEFYMVYQPMVEVGTGRCVGAEALIRWRRRNGDLIAPDVFIDEAERVGLIGKI 336 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 T+ +FEL++ D L + IN++ + S + + + ++ Q+V+E Sbjct: 337 TERVFELVSSDVQRWRGRLG-DLYISINVSAADMASGAAERLLSEMFARTGLTPSQVVVE 395 Query: 388 ITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 +TER +L EA + +G +AIDDFGTG+S+L YL F +D LKID+ F++AIG Sbjct: 396 LTERALLHSDEAVAAIKIIRKMGGRVAIDDFGTGYSSLAYLTSFEVDGLKIDKRFVDAIG 455 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + +S V ++ +AK L + VAEGVET Q R+LSE GV++ QG+ RP+PL++ + Sbjct: 456 RDAPSSSVSVHIIEMAKSLGLRVVAEGVETAGQQRFLSEHGVDYAQGWLFGRPMPLNELL 515 Query: 508 RWLKKP 513 ++P Sbjct: 516 AMARRP 521 >UniRef50_UPI0001826354 diguanylate phosphodiesterase n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001826354 Length = 280 Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 87/250 (34%), Positives = 145/250 (58%), Gaps = 2/250 (0%) Query: 264 PGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKM 323 P + + AI + Q YQP D+Q + G+EVL RW+HP+ G + PD FI AE + Sbjct: 27 PEKALSVAIHQRQIVPVYQPFFDSQTGNIAGVEVLARWKHPLYGNVAPDIFIPLAEEHDL 86 Query: 324 IVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQ 383 I PLT +L + + + + + P G+ +N++P + FK D LL +L A Q Sbjct: 87 IAPLTHYLIQQVIAELRQPIPLFPEGLYISLNLSPHNCLDPHFKTDSLDLLNALAASQVQ 146 Query: 384 IVLEITERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGF 442 +V+EITER L + ++ FA L + IA+DDFGTG+S L Y+ +++KID+ F Sbjct: 147 VVVEITERHPLHFTPQLSEWFATLRQSRIAIALDDFGTGYSNLSYIHALQPEFIKIDKLF 206 Query: 443 INAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 + + E + +LD+++ LAK +++ +AEGVET QA +L + +++QGY+ +P+ Sbjct: 207 VGQV-RENGDTRLLDSLINLAKNMDLRIIAEGVETQAQADYLRVKNCDYLQGYYFCKPVQ 265 Query: 503 LDDFVRWLKK 512 +D+ V + + Sbjct: 266 IDELVSLVSR 275 >UniRef50_B8KTI7 EAL domain protein n=2 Tax=Gammaproteobacteria RepID=B8KTI7_9GAMM Length = 528 Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 99/251 (39%), Positives = 147/251 (58%), Gaps = 13/251 (5%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 E+ +AI + YQP+VD R G E+L RW I PD F+ AE Q +I Sbjct: 282 ELRSAIDHDGIDAVYQPIVDLNTGRCVGAEILARWERSDGEMIRPDLFVAIAEQQGIIGG 341 Query: 327 LTQHLFELIARDAAELEKVL--PVGVKFGINIAP----DHLHSESFKADIQKLLTSLPAH 380 +T ++F R +L K+L ++ +N++P D+ ++ + +++K LPA Sbjct: 342 ITHNVFR---RAIGDLGKLLRKQSDLRINLNLSPLDLEDNAIADLLETELRK--ARLPAA 396 Query: 381 HFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDR 440 F+ LEITER ++ +EA L + L G +IAIDDFGTG+S+L YLE F LD LK+D+ Sbjct: 397 TFK--LEITERGLIDSEEARALISALRQRGHQIAIDDFGTGYSSLSYLESFELDTLKLDK 454 Query: 441 GFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRP 500 F++AI T +TS V+ V+ +A+ L + VAEG+E+ QA+WL E+GV QGY S+P Sbjct: 455 AFVDAIETRAVTSSVIPHVIEMARSLELDMVAEGIESEHQAQWLREQGVQMGQGYLYSKP 514 Query: 501 LPLDDFVRWLK 511 L DF +LK Sbjct: 515 LSAADFKAYLK 525 >UniRef50_B5XY29 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=12 Tax=Enterobacteriaceae RepID=B5XY29_KLEP3 Length = 511 Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 129/485 (26%), Positives = 227/485 (46%), Gaps = 42/485 (8%) Query: 36 WHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQ-QANPELTARAAFSMNVR 94 WH + + K + + + T ++ C Q +L AA ++R Sbjct: 32 WHSDQATHVAAARQAAKKIAAILDEAHAATATALNVSRSGCSGQGQFQLGTEAALQPHLR 91 Query: 95 TFVLVKDKKTFCSSATGEMDIPLN-ELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRN 153 T +L+KD + +CSS G + L+ E +P + + +LP MV +P ++ R+ Sbjct: 92 TILLIKDGQVWCSSLPGNRVLTLHPESLP------DEKLQLLPARMMVNKRPVLIYHTRS 145 Query: 154 PLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTF-------SSRLMNVNE 206 ++ + + +++L +L+ ED G+AL + + ++ + +S ++ Sbjct: 146 AQVRV--IVSISDIHLRDALY---SDEDNAGLALSVNHQMIARYGDVGPLKASPHQDIFS 200 Query: 207 LTDMPVR----ETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLM---- 258 D P R E+ RL+ + + L+ S V LL Y+L+ Sbjct: 201 SPDYPFRIIYPESPFFS---PSRLFQNG-------FGLLIFIFS---VSLLFYFLLRKYL 247 Query: 259 SVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFA 318 +V + AI + YQPVV+ + + G+E+L RW++ P FI A Sbjct: 248 NVYTSEEENLRYAIAQGYIVPFYQPVVNGKTGEIYGVEILARWKNATTQRRSPAEFIPLA 307 Query: 319 ESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLP 378 E +I+PLT+ L +A + LP G G+NI+ H+++ SF D Sbjct: 308 ERTGLIIPLTRSLMAQVAAQMNPIFSKLPDGFHIGLNISVSHINAPSFIDDCLHYQRGFE 367 Query: 379 AHHFQIVLEITERD-MLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLK 437 +++LEITE++ +L LHS G IA+DDFGTG+S L L DY+K Sbjct: 368 GKAVKLMLEITEQEPLLLNDAVVDKLNTLHSRGFSIALDDFGTGYSGLSCLHELVFDYIK 427 Query: 438 IDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWI 497 ID+ F+ + E +S +LD V+ +A+ L++ +AEGVET Q +L+ + ++ +QGY+ Sbjct: 428 IDQSFVGRVTGEAPSSKLLDCVIEMARTLSLRIIAEGVETQVQLEYLNRQNIHLLQGYYF 487 Query: 498 SRPLP 502 +P+P Sbjct: 488 WKPMP 492 >UniRef50_UPI000182647F hypothetical protein EcanA3_13737 n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI000182647F Length = 508 Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 101/275 (36%), Positives = 150/275 (54%), Gaps = 4/275 (1%) Query: 239 AFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVL 298 AF+L MS T++ L + L R ++ +AI++ Q + YQP++ + V G EVL Sbjct: 232 AFILS-MS-TIMATLTWLLALRRHSLYAQLASAIRQHQIHPHYQPLICARTNTVAGAEVL 289 Query: 299 LRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAP 358 RW H G IPPD FI AES +I+ LT+ L E + D + G K +NI+ Sbjct: 290 ARWHHAELGFIPPDVFIPVAESTGLIIDLTESLLEQVVHDLRQGGATFQPGFKLNLNISH 349 Query: 359 DHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEA-TQLFAWLHSVGVEIAIDD 417 H+ SF I + +V EITER+ + +A A + G++IA+DD Sbjct: 350 AHVVDNSFDRFIDDWAATFAELGITLVFEITERENIDISDALVAKIAHIKRSGIKIALDD 409 Query: 418 FGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVET 477 FGTG S L ++ D +KIDR F I +T T P++D V+ +AKR+N+LT AEGVE Sbjct: 410 FGTGFSNLAFITNLNPDSIKIDRMFTRQISQDTAT-PLIDCVIDMAKRMNILTTAEGVEY 468 Query: 478 PEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 Q +L ++ +QGY+ S+PL DF R+L++ Sbjct: 469 DYQVAYLKANEIDCLQGYFFSKPLSFSDFTRFLQR 503 >UniRef50_D0YY24 Putative uncharacterized protein n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YY24_LISDA Length = 511 Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 97/281 (34%), Positives = 153/281 (54%), Gaps = 10/281 (3%) Query: 238 YAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEV 297 Y +L + ++ +L + R EI I +F YQP++ + R G E+ Sbjct: 226 YTIILLTIFSSLCLVLAHNYYHRRQSLSAEIQRGIDNHEFIGYYQPIISAKNNRWCGAEL 285 Query: 298 LLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIA 357 L+RW HP AG IPPD FI+ AE ++I +T L + IA +E+++P F IN+ Sbjct: 286 LVRWNHPKAGLIPPDQFIHIAERSELIHQMTLDLIKQIALQKTYIEQLVPHSY-FSINMT 344 Query: 358 PDHLHSESFKADIQKLLTSLPAHHFQIVLEITERD------MLKEQEATQLFAWLHSVGV 411 P + + F + ++L P +V+E+TER+ +LK ++ L L S GV Sbjct: 345 PSMIANTQFVTKLVQILQMNPDLQHGLVIELTEREPFSPAKLLKLKQGMDL---LRSYGV 401 Query: 412 EIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTV 471 + A+DDFGTG+S L L++ + D LKIDR FIN + I+ +LD + + +L+ V Sbjct: 402 KWALDDFGTGYSGLATLQQLSFDILKIDRTFINLSSNDAISLSILDNIAQMGHKLHCSLV 461 Query: 472 AEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 AEGVET EQA++ + G+ QGY+ ++P+ DD+ LK Sbjct: 462 AEGVETKEQAQYAKKIGIEACQGYYYAKPMTFDDYYHALKN 502 >UniRef50_B4SIA4 EAL domain protein n=4 Tax=Proteobacteria RepID=B4SIA4_STRM5 Length = 538 Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 106/279 (37%), Positives = 144/279 (51%), Gaps = 1/279 (0%) Query: 234 NDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVT 293 W LG + V L +L R+ E+ TAI+R + Y+ YQP+++ Sbjct: 235 QQAWLYVPLGLLMAAVGAGLVIWLSRRRLSLRGELATAIRRRELYLHYQPIIELDTGICV 294 Query: 294 GLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFG 353 G E L+RW+ ++ PD FI AE MI +T + E + RD EL V Sbjct: 295 GAEALIRWQRQDGTQVRPDLFIPLAEETGMIGAITDLVIENVVRDMREL-LVADRSAHIA 353 Query: 354 INIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEI 413 IN+A + + S I K + QI +E TE L A + A G + Sbjct: 354 INLAAEDISSGRALKLIAKHMAGSGILPQQIWMEATEHGFLDLDRARTMLAQARRAGHSV 413 Query: 414 AIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAE 473 AIDDFG G S+L YLE+ LD LKID+ FI+AIGTE+ TSPV ++ +AK L + VAE Sbjct: 414 AIDDFGVGFSSLQYLEQLPLDALKIDKSFIDAIGTESATSPVTPHIIDMAKELGLWVVAE 473 Query: 474 GVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 GVET Q +L R V F QG+ SRPLP D+FV + +K Sbjct: 474 GVETEAQLAYLHTRKVEFAQGWLFSRPLPRDEFVVFHQK 512 >UniRef50_B9QX90 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QX90_9RHOB Length = 566 Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 89/247 (36%), Positives = 144/247 (58%), Gaps = 2/247 (0%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 E + AI+ +F YQPV+D + RV G EVL+RWR P + P F+ +AE+ I Sbjct: 289 EFVAAIRNGEFIPYYQPVMDIETKRVRGCEVLMRWRRPNGMIVSPGQFMAYAEANGHIFD 348 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 +T+H+ + + + L P K IN+ H ADI+ + + QIV+ Sbjct: 349 MTRHMMRVASDEVGALYGEHP-DFKLSINLFAGHFLDREIVADIKNTFENSEISYQQIVV 407 Query: 387 EITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 E+TER L++ E A ++ A L ++GV IA+DD GTGH + YL++ +D +KID+ FI++ Sbjct: 408 EVTERYPLEDMELARKIMAELQALGVRIALDDVGTGHGGMAYLQKLGVDIIKIDKMFIDS 467 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 I ++ ++ ++D+++ LA L M +AEGVE EQ L E GV QGY+ +RP+P + Sbjct: 468 ISSDDNSTTIVDSMVELADNLGMGIIAEGVEEEEQIDRLMELGVTAAQGYYFARPMPAKE 527 Query: 506 FVRWLKK 512 F+ + ++ Sbjct: 528 FIEFAER 534 >UniRef50_A9ME91 EAL n=35 Tax=Brucella RepID=A9ME91_BRUC2 Length = 530 Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 108/304 (35%), Positives = 161/304 (52%), Gaps = 9/304 (2%) Query: 212 VRETKIAGIPLTVRLYADDWT-WNDVWYAFL-LGGMSGTVVGLLCYYLMSVRMRPGREIM 269 VR + I +T R A WT + FL + G+ T + +L +L R+ E+ Sbjct: 213 VRGSDWTAIAITPR--ASIWTSMQEELLVFLPIAGVISTGMVILTIWLSRRRLSLRGELA 270 Query: 270 TAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQ 329 AI+R +F V YQP+++ + G E L+RWR P + PD FI AE+ KMI +T+ Sbjct: 271 IAIRRREFTVVYQPLIELKTGICVGAEALVRWRRPDGAMVMPDLFIPIAENSKMISQITE 330 Query: 330 HLFELIARDAAELEKVLPV--GVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + RD L VL + IN+A D L +Q+ + QI LE Sbjct: 331 QVVANTVRD---LGDVLAADEALHVAINMADDDLAQGRILTVVQRAIRGTGIRTEQIWLE 387 Query: 388 ITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TER + + + +G IAIDDFGTG+S+L YL+ +D LKID+ FI+ +G Sbjct: 388 ATERGFMDPKSTRTIIEKARELGHSIAIDDFGTGYSSLHYLQELPVDTLKIDKSFISTLG 447 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 T++ TSP+ ++ +AK L+++ VAEG+E EQA +L GV F QG+ S PLP +F+ Sbjct: 448 TDSATSPIAAHIIAMAKSLDLIIVAEGIERQEQADYLIAHGVQFGQGWLYSPPLPAQEFI 507 Query: 508 RWLK 511 + K Sbjct: 508 EFYK 511 >UniRef50_B4B5G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B5G1_9CHRO Length = 997 Score = 171 bits (433), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 86/242 (35%), Positives = 148/242 (61%), Gaps = 3/242 (1%) Query: 266 REIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIV 325 +E+ A++R++F + QP VD R+ G EVLLRW+HP G +PP AFI AE +I+ Sbjct: 756 KELRRALERQEFRLYLQPQVDINE-RIVGAEVLLRWQHPSLGLVPPCAFIPLAEDTGLII 814 Query: 326 PLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIV 385 + + + + A+ + P +NI+P L F +++++++ + Sbjct: 815 SIGEWVLQQACFFLADFQAKNP-DFHLSVNISPRQLSQAEFVSNLKQIINITAVQANSLT 873 Query: 386 LEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFIN 444 LEITER ++++ + + + + L +G+ +++DDFGTG+S+L YL+R L+ +KID+ F+ Sbjct: 874 LEITERLIIQDVDYVSSVMSKLQDLGINLSLDDFGTGYSSLAYLKRLPLNEIKIDKNFVQ 933 Query: 445 AIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLD 504 IG + +P+++A+L +A+ N+ VAEGVET EQA +L +RG +F QGY +P PL+ Sbjct: 934 DIGNYSNHAPLIEAILAVARHFNLTVVAEGVETIEQANFLKKRGCHFYQGYLYGKPQPLE 993 Query: 505 DF 506 F Sbjct: 994 TF 995 >UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Variovorax paradoxus S110 RepID=C5CTK8_VARPS Length = 1107 Score = 171 bits (433), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 94/251 (37%), Positives = 139/251 (55%), Gaps = 5/251 (1%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 A++R + + YQP +D Q R+ G+E L+RW HP+ G IPP FI AE +IV L + Sbjct: 853 ALERGELEMHYQPKMDLQTQRIVGVEALMRWHHPILGMIPPVQFIPIAEELGLIVSLGKW 912 Query: 331 LFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITE 390 E D+ +K V +N++P S + ADIQ +L + + LEITE Sbjct: 913 ALERACADSRSWQKYGLPKVLMSVNLSPRQFESRTLIADIQAVLEASGLEPSLLELEITE 972 Query: 391 RDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTE 449 ++ E A +L + +GV +AIDDFGTG+S+L YL+ F L +KIDR FIN + + Sbjct: 973 GAVMANPEHAAKLLRAIRDMGVGLAIDDFGTGYSSLSYLKHFPLSTVKIDRSFINDLSQD 1032 Query: 450 TITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD---- 505 ++D ++TLA L M VAEG+ET Q +L G + QGYW+ +P+P D+ Sbjct: 1033 ADARALIDGIITLAHGLRMKVVAEGIETTAQLDYLRSHGCDEAQGYWLCKPVPADEVRNF 1092 Query: 506 FVRWLKKPYTP 516 R L+ + P Sbjct: 1093 MARHLRNQFAP 1103 >UniRef50_Q47AF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47AF7_DECAR Length = 1094 Score = 171 bits (433), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 92/270 (34%), Positives = 155/270 (57%), Gaps = 10/270 (3%) Query: 253 LCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVA 306 C++ S+ R++ ++ +A+ Q + YQP+V+ ++ RV E LLRWRHP Sbjct: 816 FCFFTESMQTSADYRLKLSHDLRSALADGQLLLHYQPIVEVESGRVVKAEALLRWRHPQR 875 Query: 307 GEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVG---VKFGINIAPDHLHS 363 G +PPD FI+ AE +I + +F+ A A + +P G + +N++P Sbjct: 876 GMVPPDQFIHLAEETGLIHAIGDWVFQQAALTARDWAARMPAGAADCQISVNMSPRQFVK 935 Query: 364 ESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGH 422 + +A L S+ I LEITE +L E+ + A + G++I++DDFGTG+ Sbjct: 936 DGSEAGWLDYLKSIGLDPRYIGLEITEGLLLDERLHVAERLAAFRASGIQISLDDFGTGY 995 Query: 423 SALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQAR 482 SA+ YL+++ +DYLKIDR F+ + +++ + A++ +A +L + TVAEGVET EQ Sbjct: 996 SAMAYLKKYPIDYLKIDRTFVRDLVSDSGDRAIAQAMIFMASQLGLKTVAEGVETAEQRD 1055 Query: 483 WLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 L G + +QGY+ +RPLP D+F+ +L++ Sbjct: 1056 LLQSFGCDLIQGYYYARPLPRDEFMAYLEQ 1085 >UniRef50_C6QP03 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QP03_9BACI Length = 802 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 93/245 (37%), Positives = 140/245 (57%), Gaps = 2/245 (0%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+R ++ TA++ +F + YQP V+ Q+ V+ +E L+RW+HP G + P FI AE Sbjct: 542 RIRLENDLQTALENNEFSLYYQPKVNVQSGTVS-VEALIRWKHPQLGMVSPAEFIPIAEE 600 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 MI + + + + D L K +K +N++ S KA + +LTS Sbjct: 601 TNMIERIGKWVLQQSCDDLKTLHKSGFSALKMAVNLSARQFMDSSLKATVSNILTSADVP 660 Query: 381 HFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 V EITE ++KE E ++ L G+ IAIDDFG +S+L YL RF +D +KID Sbjct: 661 PSSFVFEITETTIMKEPNEVIRILQALKEQGIMIAIDDFGVSYSSLNYLNRFPIDAVKID 720 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 R FI + +++A+++LA RLN+ AEGVET EQ R+L E+G + MQGY+ SR Sbjct: 721 RSFIRDFHENRKGAEIVEAIISLAHRLNLSVTAEGVETEEQVRFLLEKGCDEMQGYYFSR 780 Query: 500 PLPLD 504 P+PL+ Sbjct: 781 PVPLE 785 >UniRef50_A0NTL0 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NTL0_9RHOB Length = 548 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 89/255 (34%), Positives = 149/255 (58%), Gaps = 6/255 (2%) Query: 263 RPGRE----IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFA 318 RP RE + AI+ +F YQPV+D ++ R+ G E+L+RWR P + P F+ +A Sbjct: 262 RPEREADDEFIAAIRNGEFIPYYQPVMDIESGRLRGCEILMRWRRPNGMIVSPGQFMAYA 321 Query: 319 ESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLP 378 E+ I +T+H+ + + + +L P +K IN+ H +DI+ + Sbjct: 322 ENNGHIFDMTRHIMRVSSEEIGDLYGDNP-DLKLSINLFAGHFLDREVISDIRSIFEKSR 380 Query: 379 AHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLK 437 QIV+E+TER L++ E A ++ A L ++GV +A+DD GTGH + YL++ +D +K Sbjct: 381 ISFQQIVVEVTERHPLEDMELARKIIAELQALGVRVALDDVGTGHGGMAYLQKLGVDIIK 440 Query: 438 IDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWI 497 ID+ FI+ IG++ ++ ++D+++ LA L M +AEGVE EQ L E GV QGY+ Sbjct: 441 IDKMFIDTIGSDDNSTTIVDSMVELADNLGMGIIAEGVEMEEQIDRLLELGVTAAQGYYF 500 Query: 498 SRPLPLDDFVRWLKK 512 + P+P D+F+ + ++ Sbjct: 501 AAPMPADEFIAFAER 515 >UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUR6_PELPD Length = 729 Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 87/255 (34%), Positives = 148/255 (58%), Gaps = 5/255 (1%) Query: 260 VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAE 319 +RM + A++R +FYV +QP+++ V E L+RW HP G IPPD FI+ AE Sbjct: 473 MRMETEAGLRNALERREFYVEFQPIMNAADSTVVAAEALVRWNHPTRGRIPPDQFIDLAE 532 Query: 320 SQKMIVPLTQHLFELI-ARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLP 378 ++VPL + + + +R + LP+ ++F +N++ + + F ++ L Sbjct: 533 ETGLVVPLGEWVLRTVCSRIKTWSDAGLPL-IRFSVNVSSRQIERQDFAEIVRNALRESG 591 Query: 379 AHHFQIVLEITERDMLKEQEA--TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYL 436 A+ Q+ +E+TE +++ + + LF L GV AIDDFGTG+S+L Y++ +D++ Sbjct: 592 ANSAQLEIELTESCLIRHSDTNISDLFG-LKEWGVSFAIDDFGTGYSSLGYIKTLPIDHI 650 Query: 437 KIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYW 496 KIDR F+ I T+ +++A++ +++RL + +AEGVET EQ R+L ERG +QGY+ Sbjct: 651 KIDRSFVRDISTDFHDQAIVEAIIAMSQRLGIRNIAEGVETIEQVRFLQERGCEEIQGYY 710 Query: 497 ISRPLPLDDFVRWLK 511 RPL + L+ Sbjct: 711 FHRPLSAEALEELLR 725 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 88/246 (35%), Positives = 146/246 (59%), Gaps = 3/246 (1%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 ++ A++ QF V YQP +D ++ R+ G+E L+RW+HP G +PP FI AE +I P Sbjct: 617 QLHQALELGQFQVHYQPQMDLRSGRICGVEALVRWQHPERGLVPPAEFIPMAEDTGLIEP 676 Query: 327 LTQHLFELIARDAAE-LEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIV 385 L + + AR+ ++ LP + +N++P ++++L ++ Sbjct: 677 LGEWVLRTAAREVRGWQDRGLPA-LNLSVNLSPRQFRHPDLPGMVERVLAESGLEAERLE 735 Query: 386 LEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFIN 444 LEITER ++ + E T + + +GV ++IDDFGTGHS+L YL+R + LKIDR F++ Sbjct: 736 LEITERLIIVDLEHTVDTLSRIARLGVRVSIDDFGTGHSSLAYLKRLPVHALKIDREFVD 795 Query: 445 AIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLD 504 IG ++ + + +AV+ L + L + +AEGVET EQA +L E G + +QG++I+RP+P Sbjct: 796 GIGQDSDDAAIAEAVIALGRTLRLQVIAEGVETREQASFLREHGCDAVQGFFIARPMPAG 855 Query: 505 DFVRWL 510 + WL Sbjct: 856 ELTGWL 861 >UniRef50_B1MA59 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1MA59_METRJ Length = 584 Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 118/330 (35%), Positives = 167/330 (50%), Gaps = 18/330 (5%) Query: 191 NTALSTFSSRLMNV-NELTDMPV-RETKIAGIPLTVRLYAD---DWTWNDVWYAFLLGGM 245 A +T + RL+NV +E D+ R A I L +R D D +D A Sbjct: 253 EAAATTTAQRLVNVLSEPFDLACGRVHTGASIGLAIRAVEDLDMDPLLHDADLALRHSKT 312 Query: 246 SGTVVGLLCYYLMS----VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRW 301 G + + MS R R ++ A+ EQF + YQ +VD + V G+E L+RW Sbjct: 313 EGRGIVSVFEAGMSEAFEARRRIEADLQAALAAEQFELHYQTLVDARDGHVAGVEALVRW 372 Query: 302 RHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHL 361 RHP G +PP +FI AE +I+PL + + RDA P V +N++ L Sbjct: 373 RHPTRGLLPPLSFIPLAEESGLILPLGRWILARACRDAL----AWPETVDVAVNVSSVQL 428 Query: 362 HSESFKADIQKLL--TSLPAHHFQIVLEITERDMLKEQEATQ-LFAWLHSVGVEIAIDDF 418 + F A++ +L T L A +I EITE +L+E EAT+ A LH G+ I +DDF Sbjct: 429 RQKGFGAEVLAVLAETGLAAARLEI--EITENSLLEESEATRDNLATLHGAGIRIVMDDF 486 Query: 419 GTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETP 478 GTG+S+L YL RF +D +KIDR F++ T ++ AV +L L + TV EGVET Sbjct: 487 GTGYSSLSYLRRFPIDKIKIDRSFMSEAETSADARAIIRAVASLGVSLGITTVVEGVETA 546 Query: 479 EQARWLSERGVNFMQGYWISRPLPLDDFVR 508 +Q GV +QGY +SRP P R Sbjct: 547 QQLELARAEGVGQVQGYLLSRPQPQASLSR 576 >UniRef50_B5ED91 Diguanylate cyclase/phosphodiesterase n=3 Tax=Geobacter RepID=B5ED91_GEOBB Length = 742 Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 90/267 (33%), Positives = 148/267 (55%), Gaps = 7/267 (2%) Query: 251 GLLCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHP 304 G C+Y + RM+ ++ A++RE+F++ YQP++D++ R+T +E LLRW P Sbjct: 455 GGFCFYSAQLNERLHERMQLEFKLRGAVEREEFFLEYQPILDSKTGRITAVEALLRWNDP 514 Query: 305 VAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSE 364 G + PD+FI AE +I+PL + + + + + V+ +NI+ Sbjct: 515 EKGRVMPDSFIPLAEDTGVILPLGEWVLRTACAKLRQWQDAGVMPVRMAVNISGRQFTQG 574 Query: 365 SFKADIQKLLTSLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHS 423 ++ L H + LE+TE ++K +E + L + V I+IDDFGTG+S Sbjct: 575 DLSKTVEDALLQSGVHPSWLELELTETCLIKNVEETVRKLCRLKGLCVSISIDDFGTGYS 634 Query: 424 ALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARW 483 +L YL+ F +D+LKIDRGFIN + ++DA++ +AK +++ +AEGVET +QA Sbjct: 635 SLQYLKNFPIDHLKIDRGFINNVCELPDDRAIVDAIIGIAKAMDLHVIAEGVETRQQAEH 694 Query: 484 LSERGVNFMQGYWISRPLPLDDFVRWL 510 L RG + QGY+ RPLP + + L Sbjct: 695 LMRRGCDEFQGYYFYRPLPEEKLLEVL 721 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 168 bits (425), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 97/268 (36%), Positives = 149/268 (55%), Gaps = 13/268 (4%) Query: 255 YYLMSVRMRPGREIMT-------AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAG 307 +Y + R REI+ A++R++F + YQP V+ ++ R+ G E L+RW HP G Sbjct: 665 FYTADLNAR-AREILAIESQLRFALERDEFVLHYQPQVEMESGRIVGAEALIRWNHPSLG 723 Query: 308 EIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFK 367 + P FI AE + IV + + R E + + IN++ Sbjct: 724 LLGPVRFIQVAEERGFIVQIGNWVIAEATRQLVEWRRAGLPELTLAINLSALQFRQPDLA 783 Query: 368 ADIQKLLTS--LPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSA 424 +++ L S LP H I E+TE ++++ +AT Q + ++G+ ++IDDFGTG+S+ Sbjct: 784 LQVKQALESSGLPGHALDI--EVTESIIMEDAQATIQTIDNMKNMGLRLSIDDFGTGYSS 841 Query: 425 LIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWL 484 L YL+RF D LKIDR F+ I + S + A++ +AK LNM VAEGVET EQ ++L Sbjct: 842 LSYLKRFKADKLKIDRSFVRDIPQDADDSAIARAIINMAKNLNMQVVAEGVETMEQWQFL 901 Query: 485 SERGVNFMQGYWISRPLPLDDFVRWLKK 512 + G +F+QGY I++PLP DDF L K Sbjct: 902 EQEGCDFVQGYLIAKPLPADDFAELLHK 929 >UniRef50_A7K1R0 Rtn protein n=3 Tax=Vibrio RepID=A7K1R0_VIBSE Length = 490 Score = 168 bits (425), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 125/439 (28%), Positives = 209/439 (47%), Gaps = 36/439 (8%) Query: 82 ELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELI-----PAL---DINKNVDMA 133 EL F ++ ++VK+ CSS G + PL E I AL +++ D Sbjct: 70 ELQQNLMFERDIEEMLIVKNGVITCSSKLGVISKPLAEHIIFPEGQALALGNVDSVYDQF 129 Query: 134 ILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTA 193 +L T A+ I + N+ + +L L S + Q + AL G+ Sbjct: 130 LLVVTEGEHGYQAVTIIDHDYF--NAKIGFNNDLRLKRSALFIHDQVAPEE-ALRTGSNP 186 Query: 194 LSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLL 253 + SS++ L++ A D ++ L + V L Sbjct: 187 IGIKSSQMFEYEALSE------------------ASDLFVKQRTLSYFLYSIPIIFVIYL 228 Query: 254 CYYLMSVRMRPGREIM----TAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEI 309 C Y ++ + P R ++ AIK+ + + YQP ++ ++ G E L+RW H G I Sbjct: 229 CLYALNKFIDPHRSLVLDLKKAIKKGELTLYYQPQINVDTGQLFGFEALVRWEHQNKGFI 288 Query: 310 PPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKAD 369 PD F+ AE ++ LT ++ + A D ++L+ V GIN+ P +L + Sbjct: 289 SPDEFVPAAEQSGLVFLLTDYVLDKAAEDFSKLD--FNQSVHLGINVPPGYLVGPNAIRK 346 Query: 370 IQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLE 429 IQ + L ++ + +EITER ++ + EA + A L G+++ IDDFGTG ++L +L+ Sbjct: 347 IQLIDRKLSQNNVSLGIEITERQLI-DAEARKCIAALRVHGIDVLIDDFGTGQTSLAFLQ 405 Query: 430 RFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGV 489 +DYLKID+ F+ IG ++++ VL A++ A+ L + +AEGVET QA L + GV Sbjct: 406 HMRIDYLKIDKCFVETIGIPSLSASVLKAIVHFAEELKVQLIAEGVETTAQADHLKKMGV 465 Query: 490 NFMQGYWISRPLPLDDFVR 508 + QGY+ S+PLP D + Sbjct: 466 RYHQGYFYSKPLPYDQLAQ 484 >UniRef50_P21514 Cyclic di-GMP phosphodiesterase yahA n=51 Tax=Escherichia RepID=YAHA_ECOLI Length = 362 Score = 167 bits (424), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 91/247 (36%), Positives = 142/247 (57%), Gaps = 2/247 (0%) Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 I A++ +F QPV Q +TG EVL+RW HP G IPPD FI AES +IV + Sbjct: 113 ISLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFIPLAESSGLIVIM 172 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 T+ L + A ++ +LP GIN++ + F+ + L+ L ++VLE Sbjct: 173 TRQLMKQTADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVNKLGNDKIKLVLE 232 Query: 388 ITERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TER+ + EA +F LH + A+DDFGTG++ YL+ F +D++KID+ F+ Sbjct: 233 LTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMA 292 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 + I+ ++D ++ LA++ + VAEGVET EQA + +GV+F+QGY S P+P + F Sbjct: 293 SVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVPGNKF 352 Query: 507 V-RWLKK 512 + W+ K Sbjct: 353 ISEWVMK 359 >UniRef50_P74400 Sll0267 protein n=3 Tax=Bacteria RepID=P74400_SYNY3 Length = 1578 Score = 167 bits (423), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 85/241 (35%), Positives = 149/241 (61%), Gaps = 3/241 (1%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 ++ +A++++QF V QP VD+ + + G E LLRW HP G IPP+ FI AE +I Sbjct: 1333 DLRSALEQKQFQVYLQPQVDSHGVWI-GAEALLRWNHPGRGFIPPNIFIPIAEEIGLIGG 1391 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 + + E + + A L++ L + ++ IN++P +F +I+ LL +++ L Sbjct: 1392 IGDFVLEQVCQYLARLQQ-LGLTLRIAINVSPRQFRQANFAKEIKNLLACTGVDPYRLTL 1450 Query: 387 EITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 E+TE ++++ +A L ++G+ ++DDFGTG+S+L YL+R L+ LKIDR F+ Sbjct: 1451 EVTEGLIVEDTHQAIATMFELQTLGIHFSVDDFGTGYSSLSYLKRLPLNELKIDRAFVQD 1510 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 + + +++A++++A+ N+ VAEGVET EQ ++L++ G NF QGY+ RP+P+D+ Sbjct: 1511 APQDLNNAALVEAIISVARTFNLAIVAEGVETEEQVQFLAQLGCNFYQGYFYGRPMPIDE 1570 Query: 506 F 506 F Sbjct: 1571 F 1571 >UniRef50_Q2BIC8 Sensory box/GGDEF family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIC8_9GAMM Length = 655 Score = 167 bits (423), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 85/242 (35%), Positives = 147/242 (60%), Gaps = 3/242 (1%) Query: 266 REIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIV 325 + + TA+K+E+F + YQP+V+ + G E L+RW P G IPPD FI AE + +I+ Sbjct: 403 QSLTTALKKEEFSLNYQPIVNLSDGSIHGYEALIRWHSPELGFIPPDRFIEIAEDESLII 462 Query: 326 PLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIV 385 P+ + + RD ++L + + +K INI+ H S+ F ++Q+ ++ + H QI Sbjct: 463 PIEEWVINTACRDISQLSVLNNLKIKIAINISYQHFISDRFIPNLQRAISKVDLHPEQIE 522 Query: 386 LEITERDMLKE--QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFI 443 +E+TER + ++ Q T++ L +G++++IDDFGTG SAL YL+ F+ D LKID+ F+ Sbjct: 523 IELTERVLAEDAYQVETKI-QRLKQMGIKVSIDDFGTGFSALNYLKDFSFDTLKIDKSFV 581 Query: 444 NAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPL 503 ++ + ++ ++ LA L++ +AEG+E Q + L++ NF QGY +SRP+P Sbjct: 582 QSMLSNERNLALVKNIIRLAHDLDIEVIAEGIELEHQYQSLAKMRCNFGQGYLMSRPVPF 641 Query: 504 DD 505 + Sbjct: 642 KE 643 >UniRef50_B7GKR7 Multidomain signal transduction protein (Contains PAS, GGDEF and EAL domains) n=2 Tax=Bacillaceae RepID=B7GKR7_ANOFW Length = 594 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 84/243 (34%), Positives = 142/243 (58%), Gaps = 2/243 (0%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 AI+R + +V YQP+V+ + ++ LE L+RW+ P G + P FI AE +IVP+T+ Sbjct: 345 AIERNELFVCYQPIVNIKTKKIEALEALMRWKQPNIGFVSPAQFIPLAEETGLIVPMTKW 404 Query: 331 LFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITE 390 LFE + + P VK GINI+ H + F + ++ H LE+TE Sbjct: 405 LFEQACVHIKAIHQFAP-HVKIGINISAVHFQQDDFVQQLSTIVKKHDVHPRFFKLELTE 463 Query: 391 RDML-KEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTE 449 ++ +E+ Q L G ++AIDDFGTG S+L YL RF +D LKID+ FI + Sbjct: 464 STIMPNAEESVQKLVQLKQCGFKLAIDDFGTGFSSLSYLHRFPIDILKIDQSFIRRLSLY 523 Query: 450 TITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRW 509 + + ++ ++ +A L++ VAEGVET +Q +L+++ + QGY+I++P+P+D+ ++ Sbjct: 524 SDDATIVSTIIMMAHHLHLSVVAEGVETEQQYEFLNKQQCDMAQGYYIAKPMPIDEVQQF 583 Query: 510 LKK 512 +++ Sbjct: 584 VQE 586 >UniRef50_Q8DL70 Tll0627 protein n=2 Tax=Chroococcales RepID=Q8DL70_THEEB Length = 845 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 92/255 (36%), Positives = 144/255 (56%), Gaps = 7/255 (2%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 E+ A +RE+F V YQP+VD L++ G E LLRW+HP G I P F+ AE +I+P Sbjct: 574 ELRRAAEREEFLVYYQPIVDLATLKMVGFETLLRWQHPERGIISPGEFMAVAEETGLILP 633 Query: 327 LTQHLFELIARDAAELEKVLPVGVKF--GINIAPDHLHSESFKADIQKLL--TSLPAHHF 382 ++ + R + P K G+N++ H +++ +L T PA Sbjct: 634 ISWWVMAEACRQMQRWAVIFPRSRKLRIGVNLSGRHFQQADLLPNLRSILAETGFPAQ-- 691 Query: 383 QIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRG 441 ++ LE+TE ++ +E A + ++G+ +++DDFGTG+S+L YL RF +D LKIDR Sbjct: 692 RLCLEVTEGILIDNKEVAIATLEEIRAMGIGVSMDDFGTGYSSLSYLHRFPIDTLKIDRT 751 Query: 442 FINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPL 501 FI+A+ +E ++ ++ A+L LA L + VAEG+ET EQ R L G N+ QGY+ +RPL Sbjct: 752 FISALNSEESSATIVHAILMLAHSLRLQVVAEGIETREQYRALQALGCNYGQGYFFARPL 811 Query: 502 PLDDFVRWLKKPYTP 516 + L + P Sbjct: 812 SARQVEKLLARQSLP 826 >UniRef50_Q2BQ91 Multisensor diguanylate cyclase/phophodiesterase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQ91_9GAMM Length = 852 Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 88/248 (35%), Positives = 149/248 (60%), Gaps = 4/248 (1%) Query: 266 REIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIV 325 +++ AI+ ++F + YQP+ +T V E L+RW HP+ G + P FI F E +I Sbjct: 597 QDLNRAIENQEFELYYQPI-ETLDAEVISAEALIRWNHPLRGLVSPIEFIPFMEETSLIA 655 Query: 326 PLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIV 385 PL + + + +DA + V K +NI+ +++ A ++++LT ++ Sbjct: 656 PLGEWILKQACQDAMHWDHHCSVPPKVSVNISTRQFQNQNMPALVKQILTDTGLSADRLT 715 Query: 386 LEITERDMLKEQEAT--QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFI 443 LEITE M+ ++++T QL + L +GV +++DDFGTG+S+L YL++F + YLKIDR FI Sbjct: 716 LEITESLMIDDEDSTIHQLNS-LRLMGVALSVDDFGTGYSSLSYLKKFPVSYLKIDRSFI 774 Query: 444 NAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPL 503 + S +++A+L++A+ L + VAEGVET QA +L+ ++QGYW+S+P+P Sbjct: 775 QGLPNCQEDSALVEAILSMAESLRLQVVAEGVETSSQANYLASLKCRYIQGYWLSKPIPQ 834 Query: 504 DDFVRWLK 511 DF +L Sbjct: 835 HDFCNYLN 842 >UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F127_9PROT Length = 529 Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 89/252 (35%), Positives = 142/252 (56%), Gaps = 1/252 (0%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+ E+ AI+R +F + YQP ++ + V G+E L+RW+HP G IPP FI+ AE Sbjct: 272 RLNMESEMRKAIERGEFVLHYQPQINATSGHVVGMEALIRWQHPERGMIPPYHFISVAEE 331 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 MIVP+ + + R +K +N++ ++ L + Sbjct: 332 TGMIVPIGEWVMYEACRQNKAWHDAGLAELKVAVNLSARQFSDRKLLDKVRHALKQSGLN 391 Query: 381 HFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 + LEITE ++K+ EAT L + S+G+ +AIDDFGTG+S+L YL+RF +D LKID Sbjct: 392 PAFLELEITESVIMKDIEATIALLEEIASMGLSLAIDDFGTGYSSLNYLKRFPIDKLKID 451 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 + FI+ + + +++A++ L+ L + + EGVE EQ WL ER N +QGY+ S+ Sbjct: 452 KSFIDDVISSEDDGKIVEAIIGLSHNLKLNVICEGVEDAEQFAWLQERQCNEIQGYYFSK 511 Query: 500 PLPLDDFVRWLK 511 PLP D+F +++ Sbjct: 512 PLPADEFEAFVR 523 >UniRef50_A6WTB4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=20 Tax=Shewanella RepID=A6WTB4_SHEB8 Length = 1497 Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 91/252 (36%), Positives = 143/252 (56%), Gaps = 2/252 (0%) Query: 262 MRPGREIMTAIKREQFYVAYQPVVDT-QALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 +R ++ AI+R++F + YQP +D + ++ G+E L+RW+HP+ G I PD FI AE+ Sbjct: 1236 LRLEADLRKAIERQEFELYYQPQIDILRNDKLIGMEALIRWKHPLDGFIRPDIFIKVAEA 1295 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +IV + + + A K K +NI+ H F DIQ +L Sbjct: 1296 CGLIVDIDRWVLRQACVQGAHWAKRYGSTFKLSVNISAVHFRQPDFIEDIQSILHETQMP 1355 Query: 381 HFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 + LEITE ++KE A + L S+G+E+AIDDFGTG+S+L YL F ++ LKID Sbjct: 1356 TASLGLEITEGVLMKELHVAKDHLSRLKSLGIEVAIDDFGTGYSSLAYLRHFEVNTLKID 1415 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 R F+ I T ++ +++ LA+ L + VAEG+ET EQ + RG +QGY+ ++ Sbjct: 1416 RSFLIDIATNKADQAIVSSIIELARNLKLNVVAEGIETVEQLEQVFSRGCYIIQGYYFAK 1475 Query: 500 PLPLDDFVRWLK 511 P+ + DF R+L+ Sbjct: 1476 PMCVADFERYLE 1487 >UniRef50_B1HUB1 Putative uncharacterized protein n=2 Tax=Bacillaceae RepID=B1HUB1_LYSSC Length = 581 Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 92/251 (36%), Positives = 145/251 (57%), Gaps = 12/251 (4%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 E+ AI +F + +QP + ++ GLE L+RW + G + P FI +AE +I+P Sbjct: 327 ELRRAIDNREFELHFQPKICMDNEQIQGLEALVRWNNERLGFVSPGEFIPYAEETGLIIP 386 Query: 327 LTQHLFELIARDAAELEKV---LPVGVKFGINIAPDHLHSESFKADIQKLLT--SLPAHH 381 L++ + E +++K +PV INI+ H +F IQ +L ++PA++ Sbjct: 387 LSEVILEKACEAVIQMQKYGWKIPVA----INISSIHFKQHNFLDSIQTILERYNMPANN 442 Query: 382 FQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDR 440 F+I E+TER ++ E L +G +I+IDDFGTG+S+L YL RF LD LKIDR Sbjct: 443 FEI--EVTERTVMNSANETVSKLVRLKQLGFKISIDDFGTGYSSLSYLVRFPLDCLKIDR 500 Query: 441 GFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRP 500 FI IG+ V+DA++ ++ RL M VAEGVE +Q L + + +QGY+ S+P Sbjct: 501 SFIQHIGSLDEKQAVVDAIIQMSHRLKMKVVAEGVEQAQQVDILRKMNCDIIQGYYYSKP 560 Query: 501 LPLDDFVRWLK 511 LPL+D + +++ Sbjct: 561 LPLNDLMEFME 571 >UniRef50_A5KWC7 PAS:GGDEF n=3 Tax=Gammaproteobacteria RepID=A5KWC7_9GAMM Length = 822 Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 88/243 (36%), Positives = 139/243 (57%), Gaps = 3/243 (1%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 AI ++ V +QP VD + + G E L+RWRHP G +PP F+ AE +I+ + + Sbjct: 571 AIANDELEVFFQPKVDLDSQEIIGAEALVRWRHPKLGLLPPVDFLEVAEKSDLIIDIDKW 630 Query: 331 LFELIARDAAELEK--VLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 +F+ +A E ++ + GV F IN + + +Q +L Q++LEI Sbjct: 631 VFKKVANLITEWQRSGINLEGVTFSINFSARMFYMTDLAEQLQVILDETDCKPHQLLLEI 690 Query: 389 TERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TERDM+++ E ++ LHS G +IAIDDFGTG+S+L L+ + D +K+DR FI I Sbjct: 691 TERDMMRDFETCSRTIEVLHSKGYKIAIDDFGTGYSSLSVLKNLSADCVKLDRSFIEDIN 750 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + + + AVL LA+ L+ +AEG+ET + L + G + QGY+ +RPLP+DD+V Sbjct: 751 SSNVDYEITCAVLKLAQILDFSVIAEGLETQNHVKTLRQIGCKYAQGYFFARPLPIDDWV 810 Query: 508 RWL 510 + Sbjct: 811 SYF 813 >UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCZ6_METSD Length = 869 Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 94/256 (36%), Positives = 144/256 (56%), Gaps = 8/256 (3%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 RMR ++ A+ +QF + YQP+V+ +V E LLRW+HP G IPPD FI AE Sbjct: 616 RMRLSNDLHLALPGQQFELYYQPIVELATGQVHKAEALLRWQHPTRGMIPPDNFIPLAEE 675 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQ---KLLTSL 377 +IV + +F AR L+ + + IN +P H+E+ + L+ L Sbjct: 676 TGLIVDIGNWVFYEAARQVKRLQSLHHASFQISINKSPVQFHNETHGHEAWISFLLMNDL 735 Query: 378 PAHHFQIVLEITERDMLKEQEA--TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDY 435 P IV+EITE ++ E+ QL + GV++A+DDFGTG+S+L YL++F +DY Sbjct: 736 PRQ--SIVVEITEGLLMHTDESISAQLLGF-RDAGVQVALDDFGTGYSSLSYLKKFDIDY 792 Query: 436 LKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGY 495 LKIDR F+ + + + +A++ +A +L++ +AEG+ET EQ L + G +F QGY Sbjct: 793 LKIDRIFVRNLSRNSSDMALCEAIVMMAHKLDIKVIAEGIETEEQRELLQQIGCDFGQGY 852 Query: 496 WISRPLPLDDFVRWLK 511 S PLP F +L+ Sbjct: 853 LFSPPLPAPAFEAYLR 868 >UniRef50_Q0A7B5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A7B5_ALHEH Length = 735 Score = 164 bits (415), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 96/256 (37%), Positives = 143/256 (55%), Gaps = 13/256 (5%) Query: 266 REIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIV 325 R++ AI +Q + YQPVVD + +E L+RW+HP G IPP FI AE I+ Sbjct: 480 RDLQEAIAGDQLMLHYQPVVDAATGYLHSVEALVRWQHPERGLIPPGVFIPLAEQTGQII 539 Query: 326 PLTQHLFELIARDAAELE----KVLPVGVKFGINIAPDHLHSESFKADIQKLLT--SLPA 379 + + RD A+L+ + LPV V NI+P F ++ ++L+ LPA Sbjct: 540 DIGHWILHRACRDMADLKARTGRTLPVAV----NISPLQFRRPGFLDNLAQVLSESGLPA 595 Query: 380 HHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKI 438 + LE+TE ++ + EAT A L S+GV AIDDFGTG S+L YL +D +K+ Sbjct: 596 ETLE--LELTEGVLMADTEATIDTLAALRSLGVHAAIDDFGTGFSSLSYLRYLPIDKVKL 653 Query: 439 DRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWIS 498 DR FI + T+ ++ V+T+A L + VAEG+ET Q R L +RG + +QG++ + Sbjct: 654 DRSFIQDVTNSRNTAAIVQGVITMAHHLELAVVAEGIETEAQRRDLQDRGCDLLQGFFFA 713 Query: 499 RPLPLDDFVRWLKKPY 514 RP+PL R L +P+ Sbjct: 714 RPMPLTVLRRRLAEPF 729 >UniRef50_C6PSS6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PSS6_9CLOT Length = 916 Score = 164 bits (415), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 90/248 (36%), Positives = 146/248 (58%), Gaps = 11/248 (4%) Query: 271 AIKREQFYVAYQP--VVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A+ +F + QP + ++ G E L+RW+ PD FI +E+ +MI+P+ Sbjct: 670 ALDNNEFNLYLQPQIIFAENEFKIIGAEALIRWKTIDGKIFTPDKFIPVSETNRMIIPIG 729 Query: 329 QHLFELIARDAAELEKVLP---VGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIV 385 + E I R ++KVL + +K INI+ + + + I++L + + +V Sbjct: 730 NWILEEIFR----IDKVLKDNGINIKLSINISSKQFENGNLVSKIKELFKENDSQNIDLV 785 Query: 386 LEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFIN 444 +EITE +L++ E A Q + +G+EI+IDDFGTG S+L YL R +DYLKID+ FI+ Sbjct: 786 IEITESFLLQDTESAIQSLLEIKKLGIEISIDDFGTGFSSLSYLARLPVDYLKIDKSFID 845 Query: 445 AIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLD 504 I T + ++++AK LN+ TVAEGVET EQA L + G + +QGY+ S+PL +D Sbjct: 846 DI-LSTNHKNLTSNIISMAKTLNLKTVAEGVETEEQANRLMDEGCDELQGYYFSKPLIID 904 Query: 505 DFVRWLKK 512 DF++++K+ Sbjct: 905 DFIKYVKQ 912 >UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LA87_MAGSM Length = 1070 Score = 164 bits (415), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 91/254 (35%), Positives = 143/254 (56%), Gaps = 1/254 (0%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+ +E+ TA+++ F + YQP V+ Q V+G+E L+RW+H G I P FI AE Sbjct: 800 RLALEQEMHTALEQRDFVLYYQPKVNLQRGVVSGVESLIRWQHKQKGMISPVEFIPVAEE 859 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +IVP+ + E +A + L +N++ S + I + L + Sbjct: 860 TGLIVPMGLWILETACAEAKRITDYLGQPFTVAVNLSARQFQSRNLLESISETLNNSAID 919 Query: 381 HFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 + EITE M+ E + + + ++GV +AIDDFGTG+S+L YL+RF ++ LKID Sbjct: 920 PSMLEFEITESMMMGNVEKSIETLVAIRNMGVTLAIDDFGTGYSSLSYLKRFPINTLKID 979 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 + FI +G ++ + ++ A++++A+ LN+ VAEG E EQ +L ERG +QGY+ SR Sbjct: 980 QSFIRDLGVDSDDAAIVSAIISMAQDLNLHVVAEGAEKAEQVLFLKERGCETVQGYYFSR 1039 Query: 500 PLPLDDFVRWLKKP 513 PLP D R LK P Sbjct: 1040 PLPQTDLERLLKDP 1053 >UniRef50_C6XBI7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBI7_METSD Length = 681 Score = 164 bits (415), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 96/258 (37%), Positives = 143/258 (55%), Gaps = 5/258 (1%) Query: 258 MSVRMRPGREIMT----AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDA 313 ++++ RE+ T A+K+E+F + YQP+VD + G E LLRW+H I PD Sbjct: 423 LTIKAAERREVETNLRFALKKEEFLLHYQPLVDLATREIIGAEALLRWQHESGKLIMPDK 482 Query: 314 FINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKL 373 FI AE +I+P+ + + + A L + P V +N++ + IQ + Sbjct: 483 FIGIAEETGLIIPIGEWVMRSACQVAVALNRGRPRPVTVAVNLSTRQFLHNDLVSSIQAI 542 Query: 374 LTSLPAHHFQIVLEITERDMLKEQEATQ-LFAWLHSVGVEIAIDDFGTGHSALIYLERFT 432 L H I LEITE +L+ + Q + L ++G+ I+IDDFGTG+SAL YL RF Sbjct: 543 LAETGCHTDWIKLEITESLLLENTDNIQRMLQSLSAMGLCISIDDFGTGYSALSYLHRFP 602 Query: 433 LDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFM 492 + LKIDR F + I + ++ A+++LA+ LN VAEGVET EQA +L + G Sbjct: 603 VRELKIDRSFTSDITDNAERALIVQAIVSLARNLNKNVVAEGVETLEQADYLHKMGCPQA 662 Query: 493 QGYWISRPLPLDDFVRWL 510 QGY S+PLPL+ F+ L Sbjct: 663 QGYLFSKPLPLEQFLALL 680 >UniRef50_B4WQV5 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WQV5_9SYNE Length = 617 Score = 164 bits (415), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 87/246 (35%), Positives = 139/246 (56%), Gaps = 3/246 (1%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 A++RE+F V YQP++D + ++V G E L+RWRHPV G IPP+ FI FAE IV L Sbjct: 362 ALQREEFEVHYQPIIDIRRMKVVGFEALVRWRHPVEGLIPPNDFIPFAEETGFIVELGAQ 421 Query: 331 LFELIARDAAELEK--VLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + ++ ++ EK VL + +NIA + L S + IQ + S ++ LE+ Sbjct: 422 VLKMACMHISDWEKAGVLDSEITISVNIAAEQLLQPSILSHIQHCIDSAGISAHRLRLEL 481 Query: 389 TERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TER ++ + E ++ L + ++IDDFGTG+SAL YL + +D LK+DR F+ +I Sbjct: 482 TERALIGDHELVDEILQALKQQNIRLSIDDFGTGYSALSYLHQLPVDCLKVDRLFVKSIT 541 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + + ++ ++++AK +NM VAEG+E Q L + G + QGY + + D+ Sbjct: 542 DDPDSLGIVPLIISMAKTMNMEVVAEGIENSTQLNQLQKLGCQYGQGYLFHKAVGADEVA 601 Query: 508 RWLKKP 513 L P Sbjct: 602 ALLSTP 607 >UniRef50_B8CUT1 EAL domain protein n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CUT1_SHEPW Length = 515 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 101/273 (36%), Positives = 146/273 (53%), Gaps = 14/273 (5%) Query: 249 VVGLLCYYLMSVRMRPGREIMT----AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHP 304 +V LC YL + R R + AI++ + YQP++D R+ G E L+RW P Sbjct: 246 LVAFLCAYLFKLLKRSERSLKQRLKRAIRQRELIAFYQPIMDAATGRIVGAEALVRWLRP 305 Query: 305 VAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPV--GVKFGINIAPDHLH 362 I P FI+ E +I PLT + E I D L+ + G + +N+ P+ + Sbjct: 306 NGEVISPARFIDELERTALINPLTIQMLEQIPED---LKSIFASDGGFRCSLNLVPEQVE 362 Query: 363 SESFKADIQKLLTS-LPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGT 420 E F ++ L S P QI +EITER L+ E A Q L ++GV I +DD GT Sbjct: 363 QEDFCRHVELLAASGFPTQ--QIAVEITERLPLRNLEVANQHLERLKALGVMIELDDAGT 420 Query: 421 GHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQ 480 G+ YL+ +D LKID+ F++ + +PVLDA + +AK L M +AEGVE +Q Sbjct: 421 GYGGASYLQELNIDILKIDKLFVDTLVLSPDNTPVLDAYIQMAKTLEMEVIAEGVEKQKQ 480 Query: 481 ARWLSERGVNFMQGYWISRPLPLDDFVR-WLKK 512 + L RGV+ QGY+ S+PLP ++FVR WL K Sbjct: 481 SLALLARGVHLHQGYYFSKPLPAEEFVRFWLSK 513 >UniRef50_A8AKK1 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC BAA-895 RepID=A8AKK1_CITK8 Length = 513 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 92/248 (37%), Positives = 139/248 (56%), Gaps = 6/248 (2%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 + AI+R + YQP+V + RV G EVL RW+H AG + PD FI AE +I Sbjct: 263 HLAVAIRRNEIQPYYQPIVCAKTNRVIGAEVLARWQHCEAGSVSPDIFIPVAERAGLIAD 322 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 LT+ L +L+ D V G KF +NI+ HL +SF + I + Q+V Sbjct: 323 LTKGLLDLVVIDIQRSVTVFKPGFKFNLNISHAHLVKDSFYSFIGTYSGVFREQNLQLVF 382 Query: 387 EITERDMLKEQEATQL---FAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFI 443 EITER ++ + + +H+VG +++DDFGTG S L Y+ + +KI R FI Sbjct: 383 EITERGEIEVNDDISNKIDYMKIHNVG--LSLDDFGTGFSNLSYITGLRPENIKIGRMFI 440 Query: 444 NAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPL 503 N I +E +P++D V+ +A+R+ + T AEGVE Q +L + V+F QGY+ SRPL Sbjct: 441 NLI-SEGKNTPLVDCVVEMAQRMRIQTTAEGVEHKYQVDYLRSKNVDFFQGYFFSRPLSF 499 Query: 504 DDFVRWLK 511 +F+R+++ Sbjct: 500 ANFIRFIR 507 >UniRef50_Q1AVS2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVS2_RUBXD Length = 762 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 96/267 (35%), Positives = 143/267 (53%), Gaps = 13/267 (4%) Query: 255 YYLMSVRMRPGR--------EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVA 306 Y + RMR R E+ A++R +F V YQP+V V +E L+RW P Sbjct: 485 YEVFEPRMRNARAEKLRLEAELRAALERGEFAVHYQPIVSFATGEVVEVEALVRWERPGR 544 Query: 307 GEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESF 366 G + P F++ AE +IVP+ + + R E +K + +N++ LH Sbjct: 545 GTVGPAEFLSVAEESGLIVPIGRWVLREACRQVREWQKGGSRELALAVNLSASQLHHPRL 604 Query: 367 KADIQKLL--TSLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHS 423 ++++ L + L A H + LEITE+ +++ +EA + L ++GV IA+DDFG+G+S Sbjct: 605 VREVEEALGLSGLEARHLK--LEITEQAAVEDAREAARRLEELSALGVRIALDDFGSGYS 662 Query: 424 ALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARW 483 AL YL F +D LKIDR FI IG + + ++ AV+ LAK LNM AEG ET EQ Sbjct: 663 ALSYLRTFPVDTLKIDRSFIEGIGRDLQATSIVGAVIALAKSLNMCVTAEGTETEEQLAH 722 Query: 484 LSERGVNFMQGYWISRPLPLDDFVRWL 510 L G + QGY+ SRP ++ R L Sbjct: 723 LRSLGCDLAQGYYFSRPASPEEVERKL 749 >UniRef50_UPI0001850699 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850699 Length = 676 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 85/244 (34%), Positives = 134/244 (54%), Gaps = 1/244 (0%) Query: 266 REIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIV 325 +I +AIK E F + YQP T R+ G+E L+RW+H G I P FI AE +I+ Sbjct: 422 EDIRSAIKHEDFLIYYQPKFSTINGRMIGVEALVRWKHRHKGIISPGHFIPLAEETGLII 481 Query: 326 PLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIV 385 PL H+ + E E + +N++ H + F ++ +L + QI Sbjct: 482 PLGAHVLRKVCLKLKEWESRGHKDIIVSVNVSSRQFHDDHFLQTVRDILIETGVNPRQIE 541 Query: 386 LEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFIN 444 LEITE +++ A ++ L +G+ I IDDFG +S+L YL++F +D LK+D+ FI Sbjct: 542 LEITESTAMEQVYRAERILKELSELGITITIDDFGIEYSSLNYLKKFAVDTLKVDKSFIR 601 Query: 445 AIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLD 504 + T ++ A++ +A L + VAEGVET EQ +WL G ++QGY+ SRP+P + Sbjct: 602 ELLTNESNQAIVRAIIVMATHLQLDLVAEGVETEEQLKWLQMNGCQYVQGYYFSRPIPCE 661 Query: 505 DFVR 508 +F + Sbjct: 662 EFEK 665 >UniRef50_A4BT02 Sensory box/GGDEF family protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BT02_9GAMM Length = 819 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 94/260 (36%), Positives = 149/260 (57%), Gaps = 9/260 (3%) Query: 265 GREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMI 324 G +I AI+ +Q + +QP+++T + + E L+RW P+ G P FI AE +I Sbjct: 537 GAKIARAIETDQLCLYFQPIINTDSGTIECAEALVRWHDPLHGLRLPSEFIPVAEQNALI 596 Query: 325 VPLTQHLFELIARDAAELEKVLPV-GVKFGINIAPDHLHSESFKA---DIQKLL--TSLP 378 +PL Q + + A + ++ P G K +N++ HL S + +Q +L + LP Sbjct: 597 IPLDQWVLKKACEHALQWQERPPSRGPKVAVNLSGAHLSSNGGRQIAETVQSILETSGLP 656 Query: 379 AHHFQIVLEITERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLK 437 + + LEITE M+ +Q L +GV IA+DDFGTG+++L YL F LD LK Sbjct: 657 GNRLE--LEITETRMVGTDQTIVDGLRRLRELGVRIAVDDFGTGYASLSYLHWFPLDKLK 714 Query: 438 IDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWI 497 +D+ F+ AIG + + +L ++L LA +L++ VAEGVETP QA +L G FMQG+ + Sbjct: 715 VDQSFVAAIGQDPTKTALLKSILLLASQLDLAVVAEGVETPHQAAFLLRHGCPFMQGHLL 774 Query: 498 SRPLPLDDFVRWLKKPYTPQ 517 ++PLP DDF++ + + P Sbjct: 775 NKPLPADDFMQLTRNWHVPS 794 >UniRef50_A0Z1K1 Hybrid signal transduction histidine kinase and diguanylate cyclase/phosphodiesterase n=3 Tax=unclassified Gammaproteobacteria RepID=A0Z1K1_9GAMM Length = 628 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 88/245 (35%), Positives = 146/245 (59%), Gaps = 3/245 (1%) Query: 275 EQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFEL 334 +Q ++AYQP +DT + R++G+E L+RW HP G I P F AE +I L +F+ Sbjct: 381 DQLFMAYQPQIDTSSGRISGVEALVRWSHPELGAISPALFAPLAEGSGLISQLGDWIFKR 440 Query: 335 IARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDML 394 + D L VLP + IN++P +F ++ L+ L +++ +I LE+TE ++ Sbjct: 441 VDSDIQSLNDVLPSYLTISINLSPLQFTQANFLETLKLRLSELQSNN-EIELELTEGVIM 499 Query: 395 KEQEATQL-FAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITS 453 + + + L L G +AIDDFGTG+S+L YL+ F ++ LKID+ F+ +G E+ S Sbjct: 500 SDADDSLLKLHELRKAGFRLAIDDFGTGYSSLSYLKDFPVNTLKIDQAFVANLGNESGNS 559 Query: 454 PVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKP 513 ++ A+L LA+ LN+ VAEGVET EQA++L N +QG+ +++P+PL + + L Sbjct: 560 -IVRAILALAEALNLDVVAEGVETQEQAQFLKRHHCNILQGFLLAKPIPLKEVIEILDVD 618 Query: 514 YTPQW 518 ++ + Sbjct: 619 FSHMY 623 >UniRef50_C5D2S1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacillus RepID=C5D2S1_GEOSW Length = 676 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 90/246 (36%), Positives = 137/246 (55%), Gaps = 8/246 (3%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 AI REQFY+ YQP + + G+E LLRWRHP GEIPP FI AE I +T Sbjct: 426 AILREQFYLCYQPKIKLDSGATMGVETLLRWRHPSLGEIPPLDFIPLAEQSGFIFEITLW 485 Query: 331 LFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHF---QIVLE 387 + E R E + P G+K +N++P L+ +Q ++ L HF ++LE Sbjct: 486 VLEHSCRQVKEWQTQFP-GLKLAVNLSPFLLNRTEL---VQHIVHILRDTHFAPEHLILE 541 Query: 388 ITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE +++ E + L ++GV++AIDDFGTG S+L Y+ + LKIDR FI I Sbjct: 542 VTESGLMENFETGKHILTQLKNIGVQVAIDDFGTGFSSLAYIRNLPVSLLKIDRSFIQGI 601 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 + + ++D ++ LAK L++ +AEGVET Q L + +F QG++ S+ L + Sbjct: 602 AENSKDATIVDTIIHLAKSLDIQVLAEGVETYHQVALLQQMDCDFAQGFYFSKSLEAEKL 661 Query: 507 VRWLKK 512 +WL++ Sbjct: 662 QKWLEE 667 >UniRef50_A6CVM5 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CVM5_9VIBR Length = 709 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 94/241 (39%), Positives = 140/241 (58%), Gaps = 9/241 (3%) Query: 275 EQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFEL 334 +QF + +QP+V + R+ G E L+RWRHP G +PP FI+ AE MI+PL Q L E Sbjct: 460 QQFELWFQPLVCIKTGRILGAESLVRWRHPTLGIVPPVDFISIAEETAMILPLGQWLIER 519 Query: 335 IARDAAELEKVLPVGVKFGINIAPDHLHS----ESFKADIQKLLTSLPAHHFQIVLEITE 390 + + INI+ L+ E F ++K +PA +I EITE Sbjct: 520 LCIQLQQWAPYFAPDFHASINISSKQLYRQNLVEMFAFYMEKY--QVPAKAIRI--EITE 575 Query: 391 RDMLK-EQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTE 449 +L+ E EA + + G+E+ +DDFGTG+S+L YL +FT+D +KIDR F+ I T+ Sbjct: 576 SLLLQDEDEAERTLKAIRESGIEVWLDDFGTGYSSLSYLRKFTVDGIKIDRSFVRDIITD 635 Query: 450 TITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRW 509 ++ A++ +AK L++L VAEG+E EQA LS+ G QGY+ +P+P+DDFV+ Sbjct: 636 PKDQQLVQAMVAMAKNLDLLVVAEGIEKIEQAEKLSQYGCQIGQGYYYDKPMPVDDFVKR 695 Query: 510 L 510 L Sbjct: 696 L 696 >UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase sensor n=1 Tax=Thauera sp. MZ1T RepID=C4KA21_THASP Length = 1093 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 98/259 (37%), Positives = 146/259 (56%), Gaps = 13/259 (5%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R++ E+ AI+ + YQP +D + RV G E L+RW+HP G +PPD F+ FAE Sbjct: 835 RLQTEAELRKAIESGDLRLHYQPQIDAASGRVYGCEALVRWQHPERGLLPPDRFVPFAEQ 894 Query: 321 QKMIVPLTQHLFELIARDAAELEKV------LPVGVKFGINIAPDHLHSESFKADIQKLL 374 +IVPL E + R+A L++V LP + +NI+ F A + ++L Sbjct: 895 SGLIVPLG----EWVLREAC-LQQVRWRDAGLPP-LDVAVNISALQFRRRDFVATVARVL 948 Query: 375 TSLPAHHFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTL 433 A +I LEITE ++ E F L ++G+ +A+DDFGTG+S+L YL+R L Sbjct: 949 GETGADPARIELEITESALMDATPELVASFDQLVALGLTLALDDFGTGYSSLSYLKRLPL 1008 Query: 434 DYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQ 493 LKIDR F++ + + + A L+LA+ L M VAEGVET +Q +L +RG MQ Sbjct: 1009 RRLKIDRSFVDGLPDNPEDAAITSATLSLARDLGMEVVAEGVETEDQRGYLCKRGCRAMQ 1068 Query: 494 GYWISRPLPLDDFVRWLKK 512 GY SRPL +++F W ++ Sbjct: 1069 GYLFSRPLGVEEFGTWFEE 1087 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 94/260 (36%), Positives = 145/260 (55%), Gaps = 3/260 (1%) Query: 257 LMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFIN 316 L++ R + + AI + + YQP VD + +V G+E L+RW+HP G + PD FI Sbjct: 970 LVTERQQIETGLRQAIACNELLLYYQPQVDISSGQVVGVEALIRWQHPELGLVAPDRFIP 1029 Query: 317 FAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTS 376 AE MI+P+ Q + E AE G++ +N++ L ++ ADI +LT Sbjct: 1030 IAEEIDMIIPIGQWVLENALAQLAEWRDKGAKGLRMAVNLSAHQLRKDTIVADIINVLTK 1089 Query: 377 LPAHHFQIVLEITERDMLK--EQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLD 434 + LEITE ++ EQ A +L A L G+E+AIDDFGTG+S+L YL+ LD Sbjct: 1090 HKLGKGALELEITESVAMQYPEQNA-KLLAELRQHGIELAIDDFGTGYSSLSYLKLLPLD 1148 Query: 435 YLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQG 494 LK+DR F+ I ++ + + A +++A L + VAEGVE Q LS G + +QG Sbjct: 1149 RLKLDRSFVKDIESDPNDAAISAATISMAHELGLTVVAEGVENEAQLVLLSGMGCDLVQG 1208 Query: 495 YWISRPLPLDDFVRWLKKPY 514 Y+ S+PL DD R++++ + Sbjct: 1209 YYFSKPLAADDCFRFIERNF 1228 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 80/243 (32%), Positives = 143/243 (58%), Gaps = 1/243 (0%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 A++RE+F++ YQP ++ ++ + G+E LLRWRHP G +PP+ FI AE +IVPL + Sbjct: 709 ALEREEFFLVYQPQMELRSGHIAGIEALLRWRHPDLGVVPPNNFIPIAEETGLIVPLGEW 768 Query: 331 LFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITE 390 + R A ++ ++ +N++ + I+K+L + LE+TE Sbjct: 769 VLAEACRQAVRWQQEGQPPLRMAVNVSARQFRQRNLGLRIEKILMETGLDPALLELELTE 828 Query: 391 RDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTE 449 +++ +EA L +G+ ++IDDFGTG+S+L +L+ F +D LKIDR F+ + + Sbjct: 829 SAVMENPEEAILTLRQLKKMGITLSIDDFGTGYSSLSHLKHFPIDRLKIDRSFVKHVTRD 888 Query: 450 TITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRW 509 + + +A++ LA + + VAEG+E EQ ++ +R + MQGY++SRP+ ++F + Sbjct: 889 HNDATIAEAIIALAHSMKLTVVAEGIEHSEQMEFMHQRHCDTMQGYYLSRPVTAEEFGTF 948 Query: 510 LKK 512 LK+ Sbjct: 949 LKR 951 >UniRef50_A6FHU8 GGDEF family protein n=1 Tax=Moritella sp. PE36 RepID=A6FHU8_9GAMM Length = 628 Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 86/235 (36%), Positives = 132/235 (56%), Gaps = 5/235 (2%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 A+ + + V YQP++ + RV G E L+RW +P+ G + PD FIN AE I+ L Sbjct: 382 ALDKHEMSVHYQPIICVKTQRVLGAEALIRWNNPILGAVAPDRFINLAEQNGQILALGNF 441 Query: 331 LFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLT--SLPAHHFQIVLEI 388 + A K +NI+P L ++ + I +LL LP + LEI Sbjct: 442 VLRTAMEQARHWRKSFGNDFSIAVNISPVQLRDDNLVSRIAQLLAYYQLPGSALE--LEI 499 Query: 389 TERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE +L+ E++ + L +GV I++DDFGTG+S+L YL++++ D LKIDR FI + Sbjct: 500 TEGVLLQDEKKVAKSLDGLQKLGVSISLDDFGTGYSSLSYLQKYSFDTLKIDRSFIMNLM 559 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 + A++ +AK+LN+ VAEGVETPEQ +++ E G +F QGY +P+P Sbjct: 560 ECDQDKELARAIIAMAKKLNLQVVAEGVETPEQHQFIVEEGCDFGQGYLYGKPVP 614 >UniRef50_B6A0H8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=23 Tax=Rhizobium RepID=B6A0H8_RHILW Length = 730 Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 99/257 (38%), Positives = 140/257 (54%), Gaps = 4/257 (1%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 RMR ++ AI+R + + YQP V + + G E LLRWRHP G IPP FI AE Sbjct: 465 RMRLESDLRRAIERGELELHYQPKVLLDSGAMVGCEALLRWRHPEMGMIPPVRFIPVAED 524 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +IV L + + + AAEL K IN++ S I +++ Sbjct: 525 TGLIVELGRWVLHEACQTAAELNADSRSPHKVAINLSVKQFQSAGLVKSIAQIIDETGCR 584 Query: 381 HFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 + +EITE +L +++ T Q + L S+G IAIDDFGTG+SAL YL RF +D LKID Sbjct: 585 AEWVEIEITESLLLDQKDETLQALSELRSMGFSIAIDDFGTGYSALNYLARFPIDTLKID 644 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 R FIN+ T+ ++ A+L++A+ L VAEGVET EQA +L G QG+ S+ Sbjct: 645 RSFINS--TDRRNEELVKAILSIARCLGQSVVAEGVETAEQAAFLVANGCGTAQGFLYSK 702 Query: 500 PLPLDDFVR-WLKKPYT 515 +P D + WL+ P + Sbjct: 703 AVPKADIIALWLRSPES 719 >UniRef50_A4B9U6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) n=1 Tax=Reinekea blandensis MED297 RepID=A4B9U6_9GAMM Length = 551 Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 82/253 (32%), Positives = 142/253 (56%), Gaps = 1/253 (0%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 +M EI A++ ++F + YQP +D ++ +V G+E L+RW HP G IPP FI AE+ Sbjct: 288 QMDMAAEIRRALREDEFQLHYQPRIDLKSRQVVGMEALIRWEHPRYGSIPPSDFIYVAEN 347 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 MI+PL + +D A+LE+ G+ IN++ L +F + + + + + Sbjct: 348 SGMILPLGNWILSRAEQDMAQLERQGMKGLNIAINLSFKQLQDPTFCDGLPRRILNWKSA 407 Query: 381 HFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 Q+ E+TE +L E + + +GV+I++DDFGTG+SAL++++ F + +KID Sbjct: 408 RSQLEFELTETAVLSNPELVKKTLVAISDLGVKISLDDFGTGYSALVHVQEFPISIVKID 467 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 + F+ + + ++++++ A RLN+ V EG+E P+Q L G QGY S+ Sbjct: 468 KSFVQRMAKDRSALTIVESIIGFAHRLNLEVVGEGIEQPDQLEKLQRMGCEQGQGYLFSK 527 Query: 500 PLPLDDFVRWLKK 512 LPL F+ + +K Sbjct: 528 ALPLAKFIDYARK 540 >UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FU0_DECAR Length = 1006 Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 85/253 (33%), Positives = 141/253 (55%), Gaps = 1/253 (0%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+ + A+ ++F + YQPV+D + RV LE L+RW HP G + P FI AE Sbjct: 751 RLNTEHALRRALANQEFCLYYQPVIDLASNRVASLEALIRWNHPEKGLLLPGKFIGIAEE 810 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +I PL + + R A+ G+K G+NI+ + + + + ++ + Sbjct: 811 TGLIQPLGEWVLWAACRQLADFAAAGISGIKMGVNISAIQMRNGNLPLLARGVIEAYDID 870 Query: 381 HFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 ++ EITE +++ E ++ L+++GV +AIDDFGTG+S+L YL F +++LK+D Sbjct: 871 PRNLIFEITESVAMEQPTETVRILDLLNAMGVSVAIDDFGTGYSSLSYLRMFPINHLKLD 930 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 R F+ IG E + DA + LA L + VAEGVET Q +L RG + +QG+ SR Sbjct: 931 RSFVEQIGEEIDGCVICDATIGLAHSLELKVVAEGVETQAQLDYLRSRGCDMVQGFLFSR 990 Query: 500 PLPLDDFVRWLKK 512 P+P D+ + ++++ Sbjct: 991 PVPADEVLAFIRQ 1003 >UniRef50_Q1JWS1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWS1_DESAC Length = 745 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 93/248 (37%), Positives = 137/248 (55%), Gaps = 5/248 (2%) Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 I ++++QF + YQP VD A RV GLE L+RW HP G + P FI AE +I L Sbjct: 482 IRQGLQQDQFELYYQPQVDPVAQRVVGLEALIRWNHPQQGLLNPSLFIPVAEQSSLICEL 541 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKL--LTSLPAHHFQIV 385 Q + RDA LE+ G+K +N++ SF ++ + L L ++H +I Sbjct: 542 GQWAVDRACRDARLLEERSLTGLKIAVNVSIQQFERPSFAKNVLESVSLHGLESNHLEI- 600 Query: 386 LEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFIN 444 EITE +++K + L L G+ +AIDDFGTG+S+L YL+ + +KIDR FI Sbjct: 601 -EITESNIMKNMDRGANLLTSLAEHGIGVAIDDFGTGYSSLSYLQTLPVSKVKIDRSFIC 659 Query: 445 AIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLD 504 + E P++ AVL LA LN+ VAEGVE +Q + L + G +QG++ S PL Sbjct: 660 NLSGEKNGLPIVIAVLNLAAALNIHCVAEGVENEQQKQILQDAGCRLIQGFYYSSPLSFA 719 Query: 505 DFVRWLKK 512 + +LK+ Sbjct: 720 QLIPYLKQ 727 >UniRef50_Q1YLW9 Putative sensory box/GGDEF family protein n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YLW9_MOBAS Length = 792 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 91/255 (35%), Positives = 136/255 (53%), Gaps = 5/255 (1%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R R ++ A++R + + YQP+VD++ + G E L+RW HP+ G + PD FI AE Sbjct: 525 RHRLEYDLRCAVERNELVLNYQPIVDSRTRQTLGFEALVRWEHPLHGRVQPDHFIPLAEQ 584 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 I + + R+AA L V V N++ D + D++ L S Sbjct: 585 TGAICGIGAWVLREACRNAASWGDHLTVAV----NVSVDQFRHGTIMTDVEDALASSGLA 640 Query: 381 HFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 ++ LEITE + + EA + L S+GV IA+DDFGTG+S+L YL +F D LKID Sbjct: 641 ADRLELEITESLFIDDPEAVVTVLHRLRSLGVRIALDDFGTGYSSLSYLRKFPFDKLKID 700 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 R F+NAI + I +L+ +L L + L++ AEGVE EQ L+ N QGY+ SR Sbjct: 701 RSFVNAIKDDRIAHGILETILALGRVLDLSVTAEGVEDAEQIDILTRMTCNQFQGYYFSR 760 Query: 500 PLPLDDFVRWLKKPY 514 P+ D +L + + Sbjct: 761 PMEAADLGAYLLRDF 775 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 143/258 (55%), Gaps = 2/258 (0%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R++ R + A++R +F + +QP+V R+ LEVLLRWRHP G + P FI AE Sbjct: 819 RLQLERGLRQALERGEFELHFQPIVAAATYRLEALEVLLRWRHPELGLVSPVRFIPLAEE 878 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +I P+ + R AE + + + IN++ + + L Sbjct: 879 TGLIRPIGDWVIRQACRQLAEWDCLGLHVPRLAINLSARQFEQQGLIMQVAGALAEAGIA 938 Query: 381 HFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 ++ LE+TE +++ EA L L ++GV ++IDDFGTG+S+L YL+RF LD LKID Sbjct: 939 AGRLELEMTESMVMQNPSEAVSLLGELKALGVRLSIDDFGTGYSSLSYLKRFPLDTLKID 998 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 R FI + + + + +A+L +A++L+ VAEGVET QA +L +G +QGY SR Sbjct: 999 RSFIEGLPGDGDNAAIAEAILAMARKLSFSVVAEGVETEAQAAFLCAKGCQLLQGYLFSR 1058 Query: 500 PLPLDDFVRWLKKPYTPQ 517 PLP + +L++ +PQ Sbjct: 1059 PLPAAELPAFLQQ-RSPQ 1075 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 89/251 (35%), Positives = 147/251 (58%), Gaps = 5/251 (1%) Query: 266 REIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIV 325 +++ A++R + ++ YQP D + ++G+E L+RW HPV G++ P FI AE IV Sbjct: 671 KDLRLALERGELFLQYQPQADLASGTLSGVEALIRWDHPVKGQVSPAEFIPVAEETGQIV 730 Query: 326 PLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLL--TSLPAHHFQ 383 + + + AE K + +N++ L I+ +L T L A H + Sbjct: 731 AIGEWVLRTACSQMAEWRKTGMHDLTIAVNLSIRQLRQPDLAELIKSVLLETGLDARHLE 790 Query: 384 IVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGF 442 LEITE M+ + Q A + + + +GV+++IDDFGTG S+L YL++ ++ LKID+ F Sbjct: 791 --LEITEGIMMGDNQAAFRFLSEMQDLGVQLSIDDFGTGFSSLNYLKQMPVNKLKIDQSF 848 Query: 443 INAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 I I T+ + ++ ++++L RLN+ +AEGVET EQ +L RG + +QGY+ SRPL Sbjct: 849 IRDIETDEGDAAIIRSIISLGHRLNLRVIAEGVETQEQLDFLRIRGCDEIQGYFYSRPLL 908 Query: 503 LDDFVRWLKKP 513 +DF+R++K P Sbjct: 909 AEDFMRFVKAP 919 >UniRef50_Q2BNG9 PAS sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNG9_9GAMM Length = 948 Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 93/250 (37%), Positives = 145/250 (58%), Gaps = 15/250 (6%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 ++ A+++++F + YQP +DT+ V G+E LLRW+H AG I P FI AE Q +IVP Sbjct: 695 DLRRALEKDEFRIFYQPQIDTRTGNVMGVEALLRWQHSEAGMISPAKFIPLAEEQGLIVP 754 Query: 327 LTQHLFELIARDAAELEKV---LPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQ 383 + E + R++ + K+ + + G+NIA + ES +Q L Sbjct: 755 IG----EWVLRESCRMGKIWHDQGMDFRIGVNIAGQQIMHESLMGTVQTALDESGIRPHL 810 Query: 384 IVLEITERDMLKEQEATQLFAWLH---SVGVEIAIDDFGTGHSALIYLERFTLDYLKIDR 440 + LE+TE +LK+ E T LH +G+ +++DDFGTG S+L YL++ ++ LKID+ Sbjct: 811 LDLEVTENFLLKQPEIT--IPKLHKFREMGLSLSMDDFGTGFSSLSYLKKLPINTLKIDQ 868 Query: 441 GFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRP 500 F+ IG++ ++ A++ LAK L + +AEGVET EQ +L G + +QGY+ SRP Sbjct: 869 SFVRDIGSDPEGEAIVKAIIVLAKSLGLEALAEGVETSEQLSYLRTHGCHLIQGYYFSRP 928 Query: 501 LP---LDDFV 507 LP L DFV Sbjct: 929 LPAEELPDFV 938 >UniRef50_Q602I2 Sensory box protein/response regulator n=1 Tax=Methylococcus capsulatus RepID=Q602I2_METCA Length = 710 Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 95/257 (36%), Positives = 142/257 (55%), Gaps = 4/257 (1%) Query: 258 MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 MS+R+R + + A++ Q + YQP+V+ + RV E LLRW HP GE+ P AFI Sbjct: 446 MSMRVRLSQALRDAVQAGQLRLHYQPIVELASGRVRKAEALLRWEHPEFGEVSPAAFIPI 505 Query: 318 AESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHS--ESFKADIQKLLT 375 AE I + +FE A AA + IN++P + F +++L Sbjct: 506 AEDCGSIHCIGDWVFERAACQAARWRSRFGTDFQVSINVSPRQFQAGGRDFGRWLERL-G 564 Query: 376 SLPAHHFQIVLEITERDMLKEQEA-TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLD 434 L + LEITE ++ +A A + GV+IA+DDFGTG+S+L YL+ F +D Sbjct: 565 ELGLDGSMLALEITETLLMDTDQAIADKLAQFRAAGVQIALDDFGTGYSSLAYLKEFRID 624 Query: 435 YLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQG 494 YLKIDR F+ + ++ + + +A++T+A RL + +AEGVETP+Q L G ++ QG Sbjct: 625 YLKIDRTFVRDMTPDSKSFLLSEAIVTMAHRLGLKVIAEGVETPQQYALLERIGCDYFQG 684 Query: 495 YWISRPLPLDDFVRWLK 511 Y SRPLP D F L+ Sbjct: 685 YLFSRPLPEDAFEGLLR 701 >UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31M30_SYNE7 Length = 917 Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 95/256 (37%), Positives = 139/256 (54%), Gaps = 12/256 (4%) Query: 260 VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAE 319 R++ + A+++ Q V YQP++ Q V GLE L RW P G IPPD FI AE Sbjct: 656 ARIQLETHLRHALEQYQLKVFYQPIISLQDNHVVGLEALARWHDPELGNIPPDRFIPIAE 715 Query: 320 SQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPA 379 +I+PL + E +D A ++ +N++P L S F K+L Sbjct: 716 ETGLIIPLGYRVIEQACQDVAIWQQKYNYPFWVAVNLSPRQLRSNRFTQITAKILQR--- 772 Query: 380 HHFQ---IVLEITERDMLKEQEAT--QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLD 434 H+F+ + LE+TE+ ML + +T Q+ LH G+ +A+DDFGTG+SAL YL R+ Sbjct: 773 HNFRPNYLKLEVTEQ-MLLDNTSTIAQMLDTLHRKGIALALDDFGTGYSALSYLRRYPFQ 831 Query: 435 YLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQG 494 LK+D+ F+ I T + ++ ++ +A L M VAEGVET EQ +L G + QG Sbjct: 832 SLKVDQSFLRDIPHSTESCALVKTIVAMAHGLGMQAVAEGVETAEQVEFLKAIGCEYGQG 891 Query: 495 YWISRPLP---LDDFV 507 YW SRPLP +D F+ Sbjct: 892 YWFSRPLPAVEIDSFL 907 >UniRef50_C1DD31 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DD31_LARHH Length = 910 Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 94/245 (38%), Positives = 140/245 (57%), Gaps = 7/245 (2%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 A++R + + YQP VD Q ++G+E LLRW HP+ G + P FI AE +I+P+ Sbjct: 653 AVERGEMQLHYQPQVDLQTGELSGVEALLRWTHPLFGAVSPGEFIPLAEESGLIIPIGDW 712 Query: 331 LFELIARDAAE-LEKVLPVGVKFGINIAPDHLHSESFKADIQKLLT--SLPAHHFQIVLE 387 + AR A+ L LP V +N++ + I +L+ +P F++ E Sbjct: 713 VLRTAARQLADWLRDGLPPMV-MAVNLSVLQFNLPGLAQQIASILSEAGVPPALFEV--E 769 Query: 388 ITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE + E EA LHSVGV++++DDFGTG+S+L YL+RF LD LKID F+ Sbjct: 770 LTESMAMTEPEAAIATIDELHSVGVQVSLDDFGTGYSSLAYLKRFRLDRLKIDGSFVRDA 829 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 ++ ++DA++ +A+ L + TVAEGVET Q + G + +QGYWISRPLP Sbjct: 830 DSDPEDRAIVDAIVGMAESLGLATVAEGVETSGQLEVIRALGGDAVQGYWISRPLPAAGL 889 Query: 507 VRWLK 511 V WL+ Sbjct: 890 VAWLE 894 >UniRef50_A4W933 Diguanylate cyclase/phosphodiesterase n=3 Tax=Enterobacteriaceae RepID=A4W933_ENT38 Length = 642 Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 86/236 (36%), Positives = 132/236 (55%), Gaps = 5/236 (2%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 A+ ++F V YQP+VD+ + E L+RW HP+ G + PD FI AE MI + + Sbjct: 405 ALANKEFVVYYQPIVDSFTQEIYSYEALIRWIHPLKGILSPDTFIPVAEKTGMINEMGKS 464 Query: 331 LFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITE 390 + E+ R+A V+P K +N++P L S++F + +L ++ LE+TE Sbjct: 465 MLEMACREAVSW--VIPA--KISVNVSPVQLSSKAFAGIVVSILNETGLSAERLELEVTE 520 Query: 391 RDMLKEQEA-TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTE 449 + E + L ++GV+I+IDDFGTG+S+L L R D +KID+ F+N++ T+ Sbjct: 521 SSLFTESKTPMNTLNRLRTLGVKISIDDFGTGYSSLSRLSRLAFDKIKIDKSFVNSVSTQ 580 Query: 450 TITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 ++ + +AK LNM TVAEGVET EQ L G +F+QGY +P P D Sbjct: 581 EDALNIIRLITGMAKSLNMKTVAEGVETQEQLESLQALGCDFIQGYLFGKPQPYID 636 >UniRef50_A6FCC1 Putative orphan protein; putative conserved domain n=1 Tax=Moritella sp. PE36 RepID=A6FCC1_9GAMM Length = 548 Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 84/254 (33%), Positives = 138/254 (54%), Gaps = 2/254 (0%) Query: 258 MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 + R+ +E+ AI +F + YQP++D + G E L+RW HPV G +PPD FI Sbjct: 279 LEYRVHLEQELNQAIINGEFEIYYQPIIDISTEKELGFEALIRWNHPVRGLVPPDDFIPV 338 Query: 318 AESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSL 377 AE +IVP+ Q + + + D A L+ P INIAP L +F +++ +L S Sbjct: 339 AEQTGLIVPIGQWIIKQVCSDLALLQINNPEYF-IAINIAPQQLADNAFVHNVRSILASY 397 Query: 378 PAHHFQIVLEITERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYL 436 QI EITE ++ + E ++ L+++G+++ IDDFGTG+S+ YL +F + Sbjct: 398 SLSPAQIHFEITETTLMNADSENLRVLRELNNLGIKLWIDDFGTGYSSFSYLHKFKFYGI 457 Query: 437 KIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYW 496 K+DR FI + + ++ + + L + + EG+E P QA +L ++G +QGYW Sbjct: 458 KLDRSFIEGVVDSERSQKIVKGICAMGDALKLELLGEGIEHPGQAEFLLKQGCYKVQGYW 517 Query: 497 ISRPLPLDDFVRWL 510 ++P+ L WL Sbjct: 518 YAKPMSLSTLNMWL 531 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 92/251 (36%), Positives = 143/251 (56%), Gaps = 11/251 (4%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 E+ AI++EQF + YQP +D +TG+E L+RW HP G IPP+ FI AE MI+ Sbjct: 461 EMRKAIEQEQFQIYYQPKIDIATSAMTGMEALVRWVHPELGIIPPNRFIPIAEETGMILA 520 Query: 327 LTQHLFELIARDAAELEKV---LPVGVKFGINIAPDHLHSESFKADIQKLL--TSLPAHH 381 L E I + A + K +K +N++ ++ + I+ +L T L H Sbjct: 521 LG----EWILKQACKQNKNWHDQGYTLKVSVNLSARQIYQKDLVEMIKDILQETKLSPHW 576 Query: 382 FQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRG 441 + LEITE +K +EAT + + +G++I+IDDFGTG+S+ Y++ +D +KID Sbjct: 577 LE--LEITESIFVKMEEATAVLQQIRDIGIQISIDDFGTGYSSFSYIKSLPVDTIKIDAS 634 Query: 442 FINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPL 501 FI I + ++ A++T+A+ LNM +AEG+E +Q L E G + QGY S+PL Sbjct: 635 FIRDIHHNQESQAIVKAIVTIAQSLNMNVIAEGIELHDQVAALKENGCDHGQGYLFSKPL 694 Query: 502 PLDDFVRWLKK 512 P DDF + L++ Sbjct: 695 PTDDFDQLLRQ 705 >UniRef50_B9IRT3 Sensory box/GGDEF family protein n=74 Tax=Bacillus RepID=B9IRT3_BACCQ Length = 909 Score = 160 bits (406), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 83/259 (32%), Positives = 137/259 (52%), Gaps = 1/259 (0%) Query: 255 YYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAF 314 Y M + R +++ A+ E+FY+ YQP +D ++ G E LLRW+HP+ G+IPP F Sbjct: 645 YKKMERKARIEKDLPLALVNEEFYLVYQPQIDITTKKIIGAEALLRWKHPLLGDIPPCEF 704 Query: 315 INFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLL 374 I E ++PL + R +K +N++ + +I +++ Sbjct: 705 IPIVEETPQVIPLGHWVLNESCRQLKIWHTFGYKDLKISVNLSAKEFQQNNLIENILQII 764 Query: 375 TSLPAHHFQIVLEITER-DMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTL 433 T + + LE+TER M+ E+E L G++ +IDDFGTG+S+L YL F + Sbjct: 765 TDVKVDPKDVTLELTERIAMIDEKETLSKLKQLKEYGIQTSIDDFGTGYSSLAYLSIFPI 824 Query: 434 DYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQ 493 D LK+ R F ++ +L+LA LN+ VAEG+ET +Q ++L + +MQ Sbjct: 825 DTLKVPREFTQLADHRPEERAIVSTILSLANTLNLSVVAEGIETEKQLKFLQKNNCKYMQ 884 Query: 494 GYWISRPLPLDDFVRWLKK 512 GY+ S+PL F+++L+K Sbjct: 885 GYYFSKPLTSHQFIKFLQK 903 >UniRef50_A6Q3C0 Signal transduction response regulator n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q3C0_NITSB Length = 651 Score = 160 bits (406), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 86/247 (34%), Positives = 138/247 (55%), Gaps = 2/247 (0%) Query: 266 REIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIV 325 E+ AI+++QF + YQP +D ++ ++ G E L+RW+HP G + P FI AE + +I Sbjct: 404 HELKIAIQKDQFLIYYQPQIDARSNKLIGAEALIRWKHPQKGILTPYHFIPLAEERNLIQ 463 Query: 326 PLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIV 385 + Q +F + +D E ++ K INI+ +H +F L+ I Sbjct: 464 QIDQIVFSHVVQDIKEWKERYGFSQKIAINISANHFAQSNFYYKFTNLIQKNGIDTSSIE 523 Query: 386 LEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFIN 444 LEITE +++ E T ++ LH G I+IDDFGTG+S+L Y+++F +D +KID+ FI+ Sbjct: 524 LEITETSIMQNLETTLRMLKKLHDHGFSISIDDFGTGYSSLFYIKKFPVDKIKIDKTFID 583 Query: 445 AIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLD 504 I ++ A++ +AK L +AEGVE EQ L + + +QGY+ +PL D Sbjct: 584 DIVKNKDDRIIVHAIVEIAKGLGYKIIAEGVEDQEQLDILLDLDCHLIQGYYFDKPLCKD 643 Query: 505 DF-VRWL 510 DF +WL Sbjct: 644 DFEKKWL 650 >UniRef50_A4A5P4 Sensory box/GGDEF family protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4A5P4_9GAMM Length = 353 Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 86/250 (34%), Positives = 148/250 (59%), Gaps = 2/250 (0%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 ++ A++ Q + YQP V+T V LE L+RW+HP G I P FI AES I+ Sbjct: 94 DLREAMRTNQLELRYQPQVETLTGAVVSLEALVRWKHPERGMISPADFIPVAESTGQIIE 153 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 L + + + +AR + + + +NI+P + ++ L+ ++ L Sbjct: 154 LGEWVLKEVARHCVYWDSIGLASFRVCVNISPLQFNQPDLLHYVKGFLSRSGLDPQRLEL 213 Query: 387 EITERDMLKEQEATQL-FAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 E+TE ++ + E+ L + L S+G+++A+DDFGTG+S+L YL RF ++ LKID+ F+ Sbjct: 214 ELTESAIMTDGESNILKLSQLKSLGLDLAVDDFGTGYSSLSYLRRFPINTLKIDQSFVAD 273 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 + + + ++DA++ LAK LNM ++AEG+ET EQ +L+ERGV+ MQG++ +RPL +D Sbjct: 274 MNSAD-GAAIVDAIIALAKTLNMRSIAEGIETEEQLAYLAERGVDLMQGFYFARPLYPED 332 Query: 506 FVRWLKKPYT 515 +++ Y+ Sbjct: 333 VPNAIRQDYS 342 >UniRef50_B6BGZ6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGZ6_9PROT Length = 595 Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 88/268 (32%), Positives = 146/268 (54%), Gaps = 15/268 (5%) Query: 254 CYYLMSVRMRPGREIM------TAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAG 307 C+Y ++ R + A++ ++ V +QP +D + ++ G+E L+RW HP+ G Sbjct: 325 CFYDEAMTERAFERVFLETALRKALEEDELVVYFQPQIDARENKLVGMEALVRWEHPIMG 384 Query: 308 EIPPDAFINFAESQKMIVPLTQHLFELIARDA-AELEKVLPVGV---KFGINIAPDHLHS 363 I PD FI AE MIV L + L+ + A + +K G+ K +N+A + Sbjct: 385 FIYPDKFIPLAEITGMIVQLDR----LVMKKALTQFKKWDKAGLNPGKLALNLAIKQIEE 440 Query: 364 ESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGH 422 F I+ +L + I E+TE ++ EA+ + L +G+ IAIDDFGTG+ Sbjct: 441 NDFIEFIENILDCEDCSYKNIEFELTENQIMNNPEASIETLQKLSDLGISIAIDDFGTGY 500 Query: 423 SALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQAR 482 S+L YL+R +D LKIDR FI + + + + +++L LN+ +AEGVET +Q Sbjct: 501 SSLAYLKRLPIDKLKIDRSFIKDLPQDADDAAITKTIISLCSSLNLKVIAEGVETEKQKN 560 Query: 483 WLSERGVNFMQGYWISRPLPLDDFVRWL 510 ++ + G F+QGY+ SRPL ++D ++L Sbjct: 561 FILQNGCQFIQGYYYSRPLSIEDMTKYL 588 >UniRef50_C9PFH4 Putative uncharacterized protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PFH4_VIBFU Length = 498 Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 116/370 (31%), Positives = 182/370 (49%), Gaps = 31/370 (8%) Query: 170 TPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELT-DMPVRETKIAG--------- 219 T SL Y D G++++I L+ S +++ + L ++ V E KI Sbjct: 119 TYSLIYIFANSDLKGISMLIPPRYLTRIVSDVIDEDLLPFEIKVYENKILNKEIKEIINT 178 Query: 220 -------IPLTVRLYADDWTWND--VWYAFLLGGMSGTVVGLLCYYLMSVRMRPGRE--I 268 PL + Y T+ + A++L + ++ Y V + E I Sbjct: 179 LQFKSSVFPLVLEFYITPKTYLHFIISEAWILLCIYFVMLSAYLYKRKKVLQKQSLESSI 238 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 + A++ QF V +QP+V V G E LLRW HP G+IPP FI AE I LT Sbjct: 239 LHALRERQFDVYFQPIVKASTQHVIGCEALLRWNHPTQGQIPPTIFIPLAERLGFIEQLT 298 Query: 329 QHLFE---LIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIV 385 + + + + AEL + G G+NI + +E+F + + + + P+ I Sbjct: 299 DFVIDRALALVDNNAELMQ----GKYIGVNIDRSLMCNEAFTYRMVERVNANPSFAEYIA 354 Query: 386 LEITERDMLKEQE---ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGF 442 EITE EQE + F L G+ + +DDFGTG+S L ++ +F D LKIDR F Sbjct: 355 FEITENGDFSEQELKIVERNFQRLTQSGIRLLVDDFGTGYSGLNFVRQFHFDTLKIDRVF 414 Query: 443 INAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 + +G E + +L ++L LA+ LNM + EGVET EQ L E GV+++QGY+ ++PLP Sbjct: 415 VKNLGHELHLNNLLVSMLQLAQSLNMQVIVEGVETQEQLDILRELGVDYIQGYFYAKPLP 474 Query: 503 LDDFVRWLKK 512 + F+ +L + Sbjct: 475 VCAFITFLNQ 484 >UniRef50_Q2SDG6 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SDG6_HAHCH Length = 686 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 83/260 (31%), Positives = 145/260 (55%), Gaps = 6/260 (2%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R + +++ AI+ ++ ++ YQP +D + +V G E LLRWRHP G +PPD FI AE+ Sbjct: 429 RKKLEKDLSKAIQNDELFLVYQPQIDLNSKQVVGCEALLRWRHPERGLVPPDVFIPIAEA 488 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVG--VKFGINIAPDHLHSESFKADIQKLLTSLP 378 + I+ + + A++ + G +K IN++ + L + F + K++ S Sbjct: 489 NETILEIGDWVLH---EACAQVNQWRNQGFNIKVAINLSANQLRQKEFAPHVLKIIESRQ 545 Query: 379 AHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLK 437 I LE+TE ++ +A L G++ A+DDFGTG+S+L YL++ + +K Sbjct: 546 IPTSLIELEVTETSFMENLNQAITSLRHLSEFGIQCAVDDFGTGYSSLSYLKQLPIRKIK 605 Query: 438 IDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWI 497 ID+ F+ + + + ++ A++ L K L + +AEGVETP Q R+L G QGY+ Sbjct: 606 IDKQFVRDLMKDEDDTQIVHAIIQLGKSLRLDVIAEGVETPRQERFLKHDGCTLAQGYYY 665 Query: 498 SRPLPLDDFVRWLKKPYTPQ 517 S+P+P D+ + ++K + PQ Sbjct: 666 SKPVPPDELIEFMKVSHAPQ 685 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 90/246 (36%), Positives = 142/246 (57%), Gaps = 6/246 (2%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 ++ TA+ REQF + YQP +D + VTG+E L+RW HP G + P FI AE +++P Sbjct: 1248 DLRTALAREQFMLHYQPQIDRRG-SVTGVEALVRWPHPQRGMVSPGEFIPLAEETGLVLP 1306 Query: 327 LTQHLFELIARDAAELEKVLPVG-VKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIV 385 L + + A + V G + +N++ H E+F D+ + +T+ A ++ Sbjct: 1307 LGRWVLHTACAQLARWQHVPGRGHLSMAVNVSSRQFHHEAFVEDVVRAITATGAPASRLK 1366 Query: 386 LEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFIN 444 LE+TE +++ E T A L S GV ++DDFGTG+S+L YL+R LD LKID+ F+ Sbjct: 1367 LELTESLFVEDMETTIATMAALRSHGVGFSLDDFGTGYSSLSYLKRMPLDQLKIDQSFVR 1426 Query: 445 AIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP-- 502 + + + ++D ++ L++ L + +AEGVET EQ L + G QGY+ SRPLP Sbjct: 1427 DLLADPNDAAIVDTIIALSRSLGLDVIAEGVETAEQRTRLEQAGCRAYQGYFFSRPLPET 1486 Query: 503 -LDDFV 507 L+DF+ Sbjct: 1487 ALEDFL 1492 >UniRef50_Q1Z8Q2 Putative uncharacterized protein n=2 Tax=Photobacterium profundum RepID=Q1Z8Q2_PHOPR Length = 517 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 85/261 (32%), Positives = 143/261 (54%), Gaps = 6/261 (2%) Query: 258 MSVRMRPG--REIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFI 315 +SV R +I I +F+ YQP+V++++ G E+L+RW HP G I P FI Sbjct: 236 LSVNFRRSIKSDIQRGINNREFHAYYQPIVNSKSGHWIGAELLVRWLHPKHGVISPAEFI 295 Query: 316 NFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLT 375 + AES +I +T HL E +A + +++ + IN+ + + + ++ +++ Sbjct: 296 HTAESTGLINTITLHLLERVAYEKTQIQAEND-DLYISINVTASMIINSRYVTELICIIS 354 Query: 376 SLPAHHFQIVLEITERDMLKEQEATQL---FAWLHSVGVEIAIDDFGTGHSALIYLERFT 432 P+ +V E TER+ E +L L VG++ A+DDFGTG++ L L+ Sbjct: 355 KYPSLQHNVVFEFTERETFSPTELVELKLGMQRLREVGIKWALDDFGTGYAGLSTLQSLR 414 Query: 433 LDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFM 492 D LKIDR F+ + T+ +T +LD + + L+ VAEGVET EQA ++ + G+ Sbjct: 415 FDILKIDRTFVASSVTDAVTHSILDNIAEMGHTLHCTMVAEGVETAEQAEYVDDLGIEAS 474 Query: 493 QGYWISRPLPLDDFVRWLKKP 513 QGY+ ++P+P DD++ + KP Sbjct: 475 QGYFYAKPMPFDDYLSGICKP 495 >UniRef50_Q2BMC3 Hybrid signal transduction histidine kinase and diguanylatecyclase/phosphodiesterase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMC3_9GAMM Length = 582 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 85/245 (34%), Positives = 138/245 (56%), Gaps = 1/245 (0%) Query: 266 REIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIV 325 +++ A+ QF++ YQP VD A RV G E LLRW HP G + P FI AE ++V Sbjct: 327 QDLRKALGNGQFHLVYQPQVDGIAKRVCGAEALLRWTHPEKGFVSPAVFIPLAEESGLMV 386 Query: 326 PLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIV 385 + + + + + + +NI+ SE F ++ +L A I+ Sbjct: 387 EIGTCVLREACKQSVIWKSQGVEKLTISVNISGKQFRSEDFLGTVKSVLAETQAVPEMIM 446 Query: 386 LEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFIN 444 LEITE + + + T +L A L ++G+E+++DDFGTG+S+L YL+ F +D LKID+ F++ Sbjct: 447 LEITESLAMSDVDKTVELLADLRALGLEVSVDDFGTGYSSLSYLKDFPIDELKIDKAFVD 506 Query: 445 AIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLD 504 + + A++T+AK+L VAEGVE Q +L+ G + +QGY+ S+PL D Sbjct: 507 GLPNNKGDQAIASAIVTMAKKLGYKIVAEGVEELPQVDYLNALGCDLIQGYYFSKPLQPD 566 Query: 505 DFVRW 509 DF+++ Sbjct: 567 DFLKY 571 >UniRef50_Q8E9W7 Putative uncharacterized protein n=1 Tax=Shewanella oneidensis RepID=Q8E9W7_SHEON Length = 500 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 92/270 (34%), Positives = 150/270 (55%), Gaps = 7/270 (2%) Query: 246 SGTVVGLLCYYLM----SVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRW 301 +G V+GLL + + ++ +I I+R +F YQP+VD+ G EVL+RW Sbjct: 229 TGIVLGLLACLVYWRWNNHQISLDSQIKRGIQRGEFIPYYQPIVDSSTGMPVGAEVLVRW 288 Query: 302 RHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHL 361 IPP+ FI FAE++ I+P+T + + D L P + F INI P HL Sbjct: 289 LRHDNRMIPPNQFIPFAEARGHILPMTTSMLNKVINDIQLLGGQSP-PLFFSINIVPAHL 347 Query: 362 HSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGT 420 ++ F +Q+++ S H ++ LEITER +K+ A Q ++++G+++ +DD GT Sbjct: 348 ENDDFYHQLQEIVESGMLGHHRLSLEITERLPIKDMTLARQTLDKIYALGIDLKLDDAGT 407 Query: 421 GHSALIYLERFTLDYLKIDRGFINAIG-TETITSPVLDAVLTLAKRLNMLTVAEGVETPE 479 G+ Y++ + LKID+ F++ IG + LDA+++ A + +AEGVET E Sbjct: 408 GYGCFSYVQHLGISTLKIDKMFVDTIGQSHNFNGKTLDAIISFANESKLHVIAEGVETVE 467 Query: 480 QARWLSERGVNFMQGYWISRPLPLDDFVRW 509 Q +L E GV +QGY+ S+PL +DF ++ Sbjct: 468 QQGYLGELGVKLIQGYYYSKPLAAEDFFKF 497 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 89/252 (35%), Positives = 140/252 (55%), Gaps = 2/252 (0%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 ++ A++ QF + YQP V ++ R+TG E LLRW H G +PP FI AE +I+P Sbjct: 668 DLREAVEAGQFQLYYQPQVVGESHRLTGAEALLRWHHSRRGMVPPSEFIPLAEETGLILP 727 Query: 327 LTQHLFE-LIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIV 385 L Q + E A+ A + + +N++ + F + +L A+ ++ Sbjct: 728 LGQWVLETACAQLATWASQPEMAQLTVAVNVSAHQIRQTDFVDQVLAVLADAGANPQRLK 787 Query: 386 LEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFIN 444 LE+TE ++ ++ L S GV ++DDFGTG+S+L YL+R LD LKID+ F+N Sbjct: 788 LELTESLLVSNVEDIIAKMTLLKSRGVGFSLDDFGTGYSSLSYLKRLPLDQLKIDQSFVN 847 Query: 445 AIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLD 504 + T+ + + ++ LA+ L + +AEGVET EQ +L+E G + QGY S+PLPL Sbjct: 848 EVLTDANDAAIAKMIVALAESLGLAVIAEGVETEEQRNFLAESGCHAYQGYLFSKPLPLA 907 Query: 505 DFVRWLKKPYTP 516 F +W+ KP P Sbjct: 908 GFEQWIGKPTAP 919 >UniRef50_A5EN18 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=3 Tax=Bradyrhizobium RepID=A5EN18_BRASB Length = 833 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 90/246 (36%), Positives = 135/246 (54%), Gaps = 5/246 (2%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 ++ AI + QF V YQP D + + G+E L+RWRHPV G +PPD FI AE+ +IVP Sbjct: 549 DLRDAIAQCQFEVHYQPFYDAETRQRRGVEALVRWRHPVKGLVPPDKFIPLAEATGLIVP 608 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 L + + DA P +K +N++P IQ L ++ + Sbjct: 609 LGEWIIGRACDDATSW----PDDIKVAVNLSPVQFKQAELFDVIQSALARSGLDPKRLEI 664 Query: 387 EITERDMLKEQEATQLF-AWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 EITE +L+ + F L +G+ +A+DDFGTG+S+L L F + +KID+ FI Sbjct: 665 EITESVLLERAAENESFIDKLKGIGISLALDDFGTGYSSLRSLTAFPFNKIKIDKSFIAN 724 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 + ++ V+ +V+TLA+ L + AEGVET EQ R L GVNF QGY + RP+P++ Sbjct: 725 LSVREESAAVISSVVTLARGLGIQITAEGVETEEQLRHLCTLGVNFAQGYLLGRPMPVEQ 784 Query: 506 FVRWLK 511 + L+ Sbjct: 785 LEQHLE 790 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 81/245 (33%), Positives = 141/245 (57%), Gaps = 1/245 (0%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 E+ +AI+ E+F + YQP D++ ++ GLE L+RW+HP G + P FI AE +I Sbjct: 1082 ELRSAIEHEEFLLYYQPQYDSKTSKIIGLEALIRWQHPEKGLVSPAVFIPIAEESGLIAE 1141 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 + + + A ++ V +N++ H ++ + ++L + L Sbjct: 1142 IGDWVLRTAVKQLASWQEAGLGAVPVAVNLSVVQFHQDTLYGSVCQILRDTKVDPSMLEL 1201 Query: 387 EITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 E+TE +++ E T + L+S+GV ++IDDFGTG+S+L YL++F +D LKID+ F+ Sbjct: 1202 ELTEGIAMEDSERTLNVLNQLNSLGVRLSIDDFGTGYSSLSYLKKFKIDKLKIDQSFVRG 1261 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 IG+ + ++ A++++AK L+ T+AEGVET EQ +L + +QGY+ S+PLP + Sbjct: 1262 IGSHPQDAAIITAIISMAKSLSFKTIAEGVETLEQLNFLIANSCDEIQGYYFSKPLPSTE 1321 Query: 506 FVRWL 510 + L Sbjct: 1322 VTKLL 1326 >UniRef50_C6QR24 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QR24_9BACI Length = 842 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 91/244 (37%), Positives = 136/244 (55%), Gaps = 5/244 (2%) Query: 270 TAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQ 329 TAI+R++ + YQP++DT + ++ GLE L RW HP G+IP + FI AE IV L + Sbjct: 594 TAIERKEVSLCYQPIIDTVSKQIIGLEALARWNHPEIGDIPANEFIAVAEENGQIVSLGK 653 Query: 330 HLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLL--TSLPAHHFQIVLE 387 H+ + + +L ++ + +N++ L F A I +LL L A H +I E Sbjct: 654 HILKTALQHLKQLHEIGFDYLYVSVNLSLRQLRHHEFTALISQLLQKNKLQASHLEI--E 711 Query: 388 ITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 ITE L +++ L +GV IAIDDFG G S++ YL F++D LKID+ FI + Sbjct: 712 ITEHIALSDEKCVIHNIQELKDIGVRIAIDDFGVGCSSIGYLRTFSVDTLKIDKSFIFDV 771 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 T T+ + A++T A LN+ VAEGVE+ EQ +L + N +QGY S P+ + Sbjct: 772 ATNPNTAQLTSALITFAHNLNLQVVAEGVESAEQLCFLEQHHCNKIQGYLFSPPVSFEQL 831 Query: 507 VRWL 510 V L Sbjct: 832 VSLL 835 >UniRef50_Q3BN81 Putative signal transduction protein n=9 Tax=Xanthomonas RepID=Q3BN81_XANC5 Length = 520 Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 86/249 (34%), Positives = 133/249 (53%), Gaps = 1/249 (0%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+ P + A++R +F V YQP++ + G E L+RW+ P +PPDAFI AE Sbjct: 264 RLSPLARLEIAVQRGEFIVHYQPIIALDSGACVGAEALVRWQQPDGVLVPPDAFIPLAEQ 323 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +I+P+T + + R+ P + IN++ D + S + + + L Sbjct: 324 SGLILPITDLVVAEVIRELGPTLAADPA-LHVAINVSADDIKSGRVQGVLAQALRGTGVD 382 Query: 381 HFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDR 440 Q+ +E TER ++ A L G ++IDDFGTG+S+L YL+ LD LKID+ Sbjct: 383 SGQLWVEATERSLMDIDAARTTITHLRGAGHTVSIDDFGTGYSSLQYLQGLPLDALKIDK 442 Query: 441 GFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRP 500 F++ IGT + TS V ++ +AK L + T+AEGVE EQ +L GV+ QG+ SR Sbjct: 443 SFVDTIGTHSATSAVTAHIIEMAKTLRLRTIAEGVERQEQLDYLRAHGVDLAQGWLFSRA 502 Query: 501 LPLDDFVRW 509 LP F+ + Sbjct: 503 LPATGFIAY 511 >UniRef50_B7ITK1 Sensory box/ggdef family n=144 Tax=Bacillus cereus group RepID=B7ITK1_BACC2 Length = 914 Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 90/261 (34%), Positives = 139/261 (53%), Gaps = 5/261 (1%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+R +++ A++ E+ ++ YQP VD+++ ++ G E L+RW HP G I P FI AE Sbjct: 650 RLRLEKDLPNALQNEELFLLYQPQVDSESNKIIGAEALIRWNHPELGIISPYEFIPIAEE 709 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTS--LP 378 I+ + + E + + +K G+N++ E F I LT+ LP Sbjct: 710 TLQIISIGKWTLEQACKQMKRWHGLGYSHLKIGVNLSAKEFEQEDFVRSISSTLTNTGLP 769 Query: 379 AHHFQIVLEITER-DMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLK 437 A LE+TER M+ E+E L S+G+ I+IDDFGTG+S+L YL + +D LK Sbjct: 770 ASSLD--LELTERIAMMDERETLIKLRTLKSLGIHISIDDFGTGYSSLAYLPLYPIDTLK 827 Query: 438 IDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWI 497 I R FI T ++ ++TLA L M +AEGVET E +L + F+QGY+ Sbjct: 828 IPREFITMSETCDDGMEIIKTIITLANTLGMSVIAEGVETKEHVNFLQKNKCQFIQGYYY 887 Query: 498 SRPLPLDDFVRWLKKPYTPQW 518 S+P+ +D F L+ P + Sbjct: 888 SKPIHIDAFTELLENGIHPYY 908 >UniRef50_A4U1P1 Sensory box/GGDEF family protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U1P1_9PROT Length = 768 Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 86/258 (33%), Positives = 149/258 (57%), Gaps = 5/258 (1%) Query: 258 MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 +++R R ++ AI+R++ + YQP+VDTQ+ R+ E LLRW H G I P FI Sbjct: 510 LALRRRLESDLRKAIQRDELELHYQPIVDTQSRRIISFEALLRWNHADDGWISPVEFIPM 569 Query: 318 AESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLT-- 375 AE MI P+ + + + + +++ V +N++ L + ++K+LT Sbjct: 570 AEGNGMIGPIGEWVLRRACQQMRDWDRMGIPPVPVAVNMSALQLKRQDVPMLVRKMLTEA 629 Query: 376 SLPAHHFQIVLEITERDMLKEQEATQ-LFAWLHSVGVEIAIDDFGTGHSALIYLERFTLD 434 +P+H + LE+TE ++++ +A Q +FA + +GV +A+DDFGTG+S+L L+RF + Sbjct: 630 GVPSHRLE--LELTETTVMEDADAAQRIFADIAGLGVRLAVDDFGTGYSSLARLKRFPVG 687 Query: 435 YLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQG 494 LKIDR F+ + + + + A++++ + + VAEGVETPEQ L+E G + +QG Sbjct: 688 KLKIDRSFVGDLAEDEGDAAIARAIISMGHAMGLKVVAEGVETPEQLAILAEAGCDAIQG 747 Query: 495 YWISRPLPLDDFVRWLKK 512 + SR +P D L++ Sbjct: 748 FLFSRAVPADQAAELLRR 765 >UniRef50_Q142N0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Burkholderia RepID=Q142N0_BURXL Length = 617 Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 88/247 (35%), Positives = 134/247 (54%), Gaps = 1/247 (0%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 AI+R+Q ++ YQP V R+ +E LLRW HP G I P F+ AE +I + + Sbjct: 371 AIERQQLHLVYQPQVTLSTGRIAQVETLLRWNHPQRGLISPVEFVPVAEEAGLIEQIGEW 430 Query: 331 LFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITE 390 + RDA +L ++ +F +N++P ++ I++ L + +EITE Sbjct: 431 VIRTACRDAGKLLRLTGTLPRFAVNVSPQQFQRQNLFETIREALDEAALDPSYLEVEITE 490 Query: 391 RDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTE 449 +L + E A Q L +GVE+A+DDFGTG+S+L YL RF L+ LKIDR F+ + T+ Sbjct: 491 GVLLGDTEQALQTLFALRELGVEVAVDDFGTGYSSLAYLTRFPLNRLKIDRSFVMRMSTD 550 Query: 450 TITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRW 509 + ++ A++ +A L AEGVET EQA L G + QG+W SRP+ + Sbjct: 551 SQCEALVGAIIAMAHALKSRVTAEGVETAEQAAQLEALGCDEAQGFWFSRPITVGALRNL 610 Query: 510 LKKPYTP 516 L+ TP Sbjct: 611 LRPLGTP 617 >UniRef50_B8DSE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DSE5_DESVM Length = 1251 Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 91/255 (35%), Positives = 141/255 (55%), Gaps = 7/255 (2%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 ++ A++R+Q Y+ YQPV+ R+ G E L+RWRHP G +PP FI AE +I+ Sbjct: 952 DLSMAMRRKQLYLEYQPVLAVDGARLLGFEALVRWRHPTEGAVPPARFIPMAEETGLILR 1011 Query: 327 LTQHLFELIARDAAELEKVLPVG--VKFGINIAPDHLHSESFKADIQKLL--TSLPAHHF 382 + Q + E A A LP + +N++ + + ++L T LP Sbjct: 1012 IGQWVLEQAAATLARWRATLPGAHDLYVSVNLSARQASQPNLTGRVARILSDTGLPPEAL 1071 Query: 383 QIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRG 441 + LEITE ++K+ + A Q L +GV I IDDFGTG+S+L YL+RF +D LK+DR Sbjct: 1072 K--LEITETAIMKDPDGALQRLEALRRLGVGIGIDDFGTGYSSLAYLQRFPVDTLKVDRS 1129 Query: 442 FINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPL 501 F++A+ + ++ V+TL + L + VAEGVET EQ ++E G + +QGY SRP+ Sbjct: 1130 FVSAVAGDAENREIVRTVVTLGRSLGLHVVAEGVETAEQFAIVAELGCHSVQGYHFSRPV 1189 Query: 502 PLDDFVRWLKKPYTP 516 + V ++ P Sbjct: 1190 AEERAVAFIAAGGVP 1204 >UniRef50_B1XK84 Two-component response regulator (ABC transporter) / (GGDEF domain protein) n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XK84_SYNP2 Length = 868 Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 85/245 (34%), Positives = 139/245 (56%), Gaps = 2/245 (0%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R++ EI +AI+ +QF + YQP+++ + + G E L+RW+HP G + P FI+ AE Sbjct: 604 RLQLEGEIRSAIEEKQFVLYYQPIINLEQGNIEGFEALIRWQHPQRGLLSPYEFIDVAEE 663 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +I+PL + + + R E ++ +K +N++ L +S + +LL P Sbjct: 664 TGLIIPLGEWILDAACRQLFEWQQAFKTPLKVHVNLSVKQLQ-DSLLFSLDRLLERYPVF 722 Query: 381 HFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 + LEITE +++ + T +L + GV I++DDFGTG+S L YL + +D LKID Sbjct: 723 PNTLGLEITESMLIQNIDITCRLLNQIRLKGVFISVDDFGTGYSCLSYLHQLPIDALKID 782 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 R F+N + +++L L+K + + TVAEG+ET +Q +WL + F QGY SR Sbjct: 783 RSFVNISELNDRNRVIAESILALSKSIGIKTVAEGIETKQQYQWLKSQDCQFGQGYLFSR 842 Query: 500 PLPLD 504 P+ LD Sbjct: 843 PVSLD 847 >UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium extorquens group RepID=B7KTV8_METC4 Length = 772 Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 85/250 (34%), Positives = 138/250 (55%), Gaps = 5/250 (2%) Query: 258 MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 + R R +++ A+ R++ + YQP V ++ ++G E LLRWRHP G I P FI Sbjct: 511 LQARQRLVQDLRNALTRDELRLDYQPFVKSETGVISGCEALLRWRHPERGMISPVEFIPL 570 Query: 318 AESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSL 377 AE +IVP+ + + R+AA P + +N++P S I LTS Sbjct: 571 AEESGLIVPIGMWVIQQACREAASW----PSTYRISVNVSPVQFRSRDLPQVILAALTSS 626 Query: 378 PAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYL 436 ++ +E+TE ++ + + A ++ + S+GV +A+DDFGTG+S+L YL RF D + Sbjct: 627 GLAPARLEVEVTEAVLIDDADTALEILRQIRSLGVRVALDDFGTGYSSLSYLRRFPFDKI 686 Query: 437 KIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYW 496 KIDR F+ + T + ++ A+ +A+ L M AEGVET +QA+ L + G +QG+ Sbjct: 687 KIDRSFVQELDTRHDSQVIVQAIRDMAQGLGMTVTAEGVETDDQAKRLRQTGCEELQGFL 746 Query: 497 ISRPLPLDDF 506 SRP P ++ Sbjct: 747 YSRPRPANEL 756 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 90/246 (36%), Positives = 141/246 (57%), Gaps = 4/246 (1%) Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A++ E+F + YQP+V+ + RV G EVL+RW+ P +PP FI AE +IVPL Sbjct: 634 LRRALRCEEFVLHYQPLVELASGRVLGAEVLVRWQPPGEALVPPSRFIPLAEETGLIVPL 693 Query: 328 TQH-LFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 L E + A L+ LP+ +N++P ++K L Q+ L Sbjct: 694 GDWVLHEACRQGKAWLDAGLPL--LLAVNLSPRQFLRHDLVGQVRKALQGSGLPPAQLEL 751 Query: 387 EITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 E+TE ++++ E A + L +GV +AIDDFGTG+S+L YL+RF LD LKIDR F+ Sbjct: 752 ELTEGALMEQAEQAVKTLHALKRLGVSLAIDDFGTGYSSLAYLKRFPLDKLKIDRSFVRD 811 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 + ++ + ++ ++ + + L + +AEGVETP+Q +L + G + QGY S PLP + Sbjct: 812 LPRDSSDAEIVTTIIAMVRNLKLEALAEGVETPQQLAFLRQLGCDSGQGYLFSPPLPAEA 871 Query: 506 FVRWLK 511 F RWL+ Sbjct: 872 FERWLR 877 >UniRef50_Q2W5V0 Predicted signal transduction protein containing a membrane domain n=3 Tax=Magnetospirillum RepID=Q2W5V0_MAGSA Length = 820 Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 90/256 (35%), Positives = 137/256 (53%), Gaps = 1/256 (0%) Query: 260 VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAE 319 R+R E+ A+ +QF++ YQP+V R G+E LLRW +P G +PPD FI AE Sbjct: 564 ARLRMEGELRRAVGTDQFHLVYQPLVAVATGRAVGVEALLRWSNPELGNVPPDRFIPQAE 623 Query: 320 SQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPA 379 + +IV + + + E RDA + ++ IN++P F D++ L Sbjct: 624 TCGVIVAIGRMVLETACRDARRWVEDGHADLRLCINVSPRQFQDAGFLGDVRAALAGSGL 683 Query: 380 HHFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKI 438 + LEITE +L E+ + L L +GV+++IDDFGTG+S+L YLERF D LKI Sbjct: 684 SPANLELEITEGLLLTERGDVDTLLRTLTDMGVKLSIDDFGTGYSSLSYLERFPFDTLKI 743 Query: 439 DRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWIS 498 DR F+ + +++ ++ +A L + +AEGVET EQ L+ + QGY S Sbjct: 744 DRSFMIGMLERQERKVLVETIVAMASGLGLEVIAEGVETAEQMAHLAAINCDIAQGYLFS 803 Query: 499 RPLPLDDFVRWLKKPY 514 RP+P D L + + Sbjct: 804 RPVPAGDISPLLDRVF 819 >UniRef50_Q21VJ9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21VJ9_RHOFD Length = 735 Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 89/235 (37%), Positives = 131/235 (55%), Gaps = 7/235 (2%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 A++R + + YQP VD + ++ G E L+RW HP G + F+ FAE +I+P+T Sbjct: 492 ALERGELEMYYQPQVDVRTQKIVGAEALMRWNHPERGFLGAGDFLPFAEENGLIIPITDW 551 Query: 331 LFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHF---QIVLE 387 + E I D + V+ +N++P +L F KL +L HH QI +E Sbjct: 552 MLEAICLDLLDWNAAGGEPVRLSLNLSPQYLDRGDF---FDKLKNALTLHHINASQIEVE 608 Query: 388 ITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE + Q A + L +GV +AIDDFGTG+S+L YL RF + +KIDR F+ I Sbjct: 609 VTENICIHNPQTAIEQLNKLCQLGVSVAIDDFGTGYSSLSYLHRFPIHTIKIDRSFVMKI 668 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPL 501 + PV+ A++++AK L++ VAEGVET Q R+L G N MQGY +PL Sbjct: 669 QNDNSQCPVVLAIISIAKGLSLNLVAEGVETQVQERYLERSGCNTMQGYLYHKPL 723 >UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=3 Tax=Geobacter RepID=C6E7Z7_GEOSM Length = 721 Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 88/248 (35%), Positives = 140/248 (56%), Gaps = 5/248 (2%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 A++RE+F + YQP VD VT +E L+RW HP G + PD FI +E IV LT Sbjct: 454 ALEREEFVLHYQPKVDLLTGNVTSVEALVRWMHPRLGMLAPDKFIRLSEESGFIVELTDW 513 Query: 331 LFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITE 390 + A + ++ V+ +N++P H + K I +L + + +EITE Sbjct: 514 VLRTACTQAKKWQEQNLGSVRVAVNLSPYHFQRQDVKEAIFSVLDATGLEPALLEIEITE 573 Query: 391 RDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTE 449 +++ E T LF L +G+ I++DDFGTG+S+L YL RF ++ LKIDR FI + Sbjct: 574 SALMQNDEYTCALFRELRELGMTISVDDFGTGYSSLSYLHRFPINTLKIDRTFILNMMKS 633 Query: 450 TITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRW 509 + ++ A++ +AK LNM VAEGVET +Q L ++G + +QG+ +SRP+ + ++ Sbjct: 634 SEDQAIVTAIIAMAKSLNMQIVAEGVETVDQLEKLKDQGCHEIQGFLVSRPVAAESVTQF 693 Query: 510 LKKPYTPQ 517 +TP+ Sbjct: 694 ----FTPE 697 >UniRef50_B8KPF2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KPF2_9GAMM Length = 609 Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 86/250 (34%), Positives = 147/250 (58%), Gaps = 2/250 (0%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 ++ A++ +Q + YQP V+T V LE L+RW+HP G I P FI AES I+ Sbjct: 345 DLREAMRTDQLELRYQPQVETVTGAVVSLEALVRWKHPERGMISPADFIPVAESTGQIIE 404 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 L + + + +AR + + + +NI+P + I+ L ++ L Sbjct: 405 LGEWVLKEVARHCVYWDSIGLASFRVCVNISPLQFNQPDLLHYIKGFLGRSGLDPHRLEL 464 Query: 387 EITERDMLKEQEATQL-FAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 E+TE ++ + E+ L + L S+G+++A+DDFGTG+S+L YL RF ++ LKID+ F+ Sbjct: 465 ELTESAIMTDGESNILKLSQLKSLGLDLAVDDFGTGYSSLSYLRRFPINTLKIDQSFVAD 524 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 + + + ++DA++ LAK LNM ++AEG+ET EQ +L++RGV+ MQG++ +RPL +D Sbjct: 525 MNSAD-GAAIVDAIIALAKTLNMRSIAEGIETEEQLAYLAKRGVDLMQGFYFARPLYPED 583 Query: 506 FVRWLKKPYT 515 + + Y+ Sbjct: 584 VPNAIAQDYS 593 >UniRef50_A4TYP2 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TYP2_9PROT Length = 953 Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 86/241 (35%), Positives = 131/241 (54%), Gaps = 5/241 (2%) Query: 275 EQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFEL 334 +QF V YQP+V+ Q+ R+ G E L+RW +P G +PPD FI AES +IVP+ + + Sbjct: 714 DQFKVFYQPLVNAQSGRIIGAEALVRWFNPTRGLVPPDRFIPLAESNGLIVPMGRKILAT 773 Query: 335 IARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLT--SLPAHHFQIVLEITERD 392 D A K + +N+A F + K L+ LP H ++ EITER Sbjct: 774 ACADGARFRKHIGSDFFMAVNVAAAQCADPGFLETVSKCLSDAKLPPHCLEV--EITERT 831 Query: 393 MLKEQEA-TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETI 451 ++ T L +++IDDFGTG+SAL YL ++ LKIDR F+ IG Sbjct: 832 VVGNNPTITAFMTALREAESKLSIDDFGTGYSALSYLRQYPFTTLKIDRSFVMGIGDVEQ 891 Query: 452 TSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 ++ A++ +A L + +AEGVET EQ +L + G +QGY + +P+P D+F+ ++ Sbjct: 892 DDALVLAIIHMAHALGLEVIAEGVETTEQQEFLRDAGCETLQGYLLGKPMPADEFMALVQ 951 Query: 512 K 512 K Sbjct: 952 K 952 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 89/259 (34%), Positives = 143/259 (55%), Gaps = 5/259 (1%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R++ E+ A R + + YQP +D V G E L+RW+HP G + P FI AE Sbjct: 764 RLQLQGELRNAHLRGEIMLHYQPQIDVTDGHVVGCEALMRWKHPTLGMVSPGRFIPLAEE 823 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLL--TSLP 378 +I+ L R A ++ + +N++ +F A + L TSLP Sbjct: 824 SGLIITLGNWAIREACRQAMVWQRAGLPPLTVAVNLSGCQFQQSNFTAVVADALADTSLP 883 Query: 379 AHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLK 437 + + LE+TE ++ + ++ L ++GV+++IDDFGTG+S+L YL+RF +D LK Sbjct: 884 PQYLE--LELTESIVMHDVEQVIATLTELKALGVQLSIDDFGTGYSSLNYLKRFPVDLLK 941 Query: 438 IDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWI 497 ID+GF+ + T+ + ++ A++ L K LN+ +AEGVET Q +L GV+F+QGY+ Sbjct: 942 IDQGFVRDVETDPSDAAIVRAIIALGKILNLRLIAEGVETQGQLDYLHAAGVDFIQGYYF 1001 Query: 498 SRPLPLDDFVRWLKKPYTP 516 SRPLP +D +L + P Sbjct: 1002 SRPLPAEDMATYLAQRLLP 1020 >UniRef50_B1KIP0 Diguanylate cyclase/phosphodiesterase n=3 Tax=Shewanella RepID=B1KIP0_SHEWM Length = 796 Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 90/245 (36%), Positives = 140/245 (57%), Gaps = 10/245 (4%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 AI + + YQP++D + ++ G E L+RW G + PD FI AE +I L Sbjct: 546 AISLDDIEIYYQPILDLASRKIIGAEALMRWTDSELGVVSPDEFIPLAEKNGLIHKLGDI 605 Query: 331 LFELIARDAAELEKVLPVGVKFGINIAPDHL-HSESFKADIQKLL--TSLPAHHFQIVLE 387 + + AA + + P+ K IN + +SE +A I ++L T LPA ++ +E Sbjct: 606 VLQRACSQAASWQSITPL--KMAINFSSVQFRYSEQLQARIVEVLAQTGLPAD--KLDME 661 Query: 388 ITERDMLKEQEA--TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 +TE +L +QE+ + A+L +G+E++IDDFGTG+SAL YL++F+ LKIDR FIN Sbjct: 662 VTE-SLLIDQESGLMTMLAYLKQLGIEMSIDDFGTGYSALSYLQKFSFSKLKIDRAFINK 720 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 + + ++ A+L +AK L M VAEG+E +QA++L G F QGY SRP+ + Sbjct: 721 MASSKSDKALVTAILAMAKSLEMKVVAEGIEDEQQAQFLQSHGCEFGQGYLFSRPVTAEA 780 Query: 506 FVRWL 510 F + L Sbjct: 781 FTQLL 785 >UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBG1_BREBN Length = 805 Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 86/253 (33%), Positives = 139/253 (54%), Gaps = 4/253 (1%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 +M E+ A+ R++F + YQP V ++ + G+E L+RW HP G + PD FI+ AE Sbjct: 549 KMNIQNELNRALARQEFLLHYQPQVSAKSGAIVGVEALIRWDHPERGLLLPDQFISVAEE 608 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLL--TSLP 378 +IVP+ + + + + + ++ +N++ + F I ++L T L Sbjct: 609 TGLIVPIGEWVLRTACKQNKQWQDQGLKPLRVAVNLSARQFLKQDFTQMIAEILHQTRLA 668 Query: 379 AHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKI 438 + + LEITE M+ ATQ L +GV +AIDDFGTG+S+L YL+ F L+ LKI Sbjct: 669 PEYLE--LEITESSMIDVHRATQALKELKQLGVHVAIDDFGTGYSSLYYLKEFPLNRLKI 726 Query: 439 DRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWIS 498 DR F+ + + ++ ++++A L M +AEGVET E+ +L E +QGY S Sbjct: 727 DRSFVRDMIEQPSNQAIVSTIISMAHHLQMHVIAEGVETKEELAFLQEHLCEEVQGYLFS 786 Query: 499 RPLPLDDFVRWLK 511 RPLP +D +L+ Sbjct: 787 RPLPSEDVAFYLQ 799 >UniRef50_A9NHF2 Predicted signal transduction protein n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NHF2_ACHLI Length = 541 Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 90/248 (36%), Positives = 144/248 (58%), Gaps = 7/248 (2%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 E++ AIK +QF++ YQP + + +E LLRW HP G I P FI AE ++ Sbjct: 295 ELLHAIKNDQFHLVYQPKICLKGEGHKSVEALLRWHHPFKGTISPLVFIPVAEEAGLMTE 354 Query: 327 LTQHLFELIARDAAELEKVLPVG--VKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQI 384 +T+ +I R EL+ + VG +K INI+P + + F + I+ +LT I Sbjct: 355 ITR---IVIRRVIEELKYLKSVGLEIKASINISPRDFNHDGFTSFIKHILTDCEIDPSLI 411 Query: 385 VLEITERDML-KEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFI 443 LE+TER +L K Q +LF +G++I++DDFGTG+++LI+L +D++K+DR FI Sbjct: 412 ELEVTERSVLDKSQRVIELFKEFRQMGIKISLDDFGTGYNSLIHLVNVPMDFVKLDRSFI 471 Query: 444 NAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPL 503 I T+ +++ +++LA LN+ +AEGVET EQ L + +QGY++S+PL Sbjct: 472 TNI-TKPNYQKMIEKLISLAHDLNIKVIAEGVETKEQLNILKSMNCDIVQGYYLSKPLER 530 Query: 504 DDFVRWLK 511 +D + K Sbjct: 531 EDLEAFYK 538 >UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. WCH70 RepID=C5D2J8_GEOSW Length = 568 Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 91/274 (33%), Positives = 147/274 (53%), Gaps = 11/274 (4%) Query: 238 YAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEV 297 YA GM G G + L + + A++R +F + YQP +D + ++ +E Sbjct: 299 YALYHAGMHGN--GKQLFQLETA-------LRKALERGEFELYYQPQLDIKTKQIRAVEA 349 Query: 298 LLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIA 357 L+RW HP G I P FI AE +I P++ + +L+ P VK INI+ Sbjct: 350 LIRWNHPEKGFISPGMFIPLAEESGLITPISDWIMMQACEHLKQLQLRFPY-VKMSINIS 408 Query: 358 PDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDML-KEQEATQLFAWLHSVGVEIAID 416 P + F +QK + S+ + I LE+TE ++ +++ + L ++G+ IAID Sbjct: 409 PIYFQQIDFLKKLQKTIESVNVNPRLIELELTESAVMPHAEQSVERLTKLKTMGMSIAID 468 Query: 417 DFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVE 476 DFGTG S+L YL RF +D LKIDR F + S ++ A++ +A L + VAEGVE Sbjct: 469 DFGTGFSSLSYLHRFPIDILKIDRSFTKQLSRYQQDSAIVKAIIMMAHSLQIRVVAEGVE 528 Query: 477 TPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 T +Q + L ++ +F+QGY++S+PL + + +L Sbjct: 529 TKKQYQILEKQSCDFVQGYYVSKPLSISELYEFL 562 >UniRef50_A6QBP9 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QBP9_SULNB Length = 604 Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 88/249 (35%), Positives = 133/249 (53%), Gaps = 7/249 (2%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 ++ ++REQF V YQP+VD+++ + E L+RWRHP G IPPD FI E IV Sbjct: 359 DMHAGLEREQFEVYYQPIVDSKSKEIASAEALIRWRHPKYGMIPPDVFIPIMEKTGFIVE 418 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQ--- 383 L + + + R E ++ IN++ L S +F + +L L H Sbjct: 419 LGKFVLNEVLRQQKRWELFKFQQIEVSINLSLLELESGNF---VNNVLDRLKHHQVNPEL 475 Query: 384 IVLEITERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGF 442 I EITE +K E+ ++Q F L +GV I +DDFGTG+++ YL+RF LKID+ Sbjct: 476 IKYEITEGLAMKNEERSSQQFIELRKLGVAIVLDDFGTGYTSFAYLKRFPATTLKIDKEL 535 Query: 443 INAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 I+ I T ++ +++ L L M V EG+E L G ++MQGY+ SRPLP Sbjct: 536 IDCIITNEENQHIVKSIINLGHSLGMKVVIEGIENKNMVDLLENYGCDYMQGYYFSRPLP 595 Query: 503 LDDFVRWLK 511 + +F + L+ Sbjct: 596 VFEFQKMLR 604 >UniRef50_Q97LD1 Signal transduction protein containing diguanylate cyclase/phosphodiesterase domain (GGDEF) and domain (EAL) n=1 Tax=Clostridium acetobutylicum RepID=Q97LD1_CLOAB Length = 772 Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 82/233 (35%), Positives = 135/233 (57%), Gaps = 1/233 (0%) Query: 275 EQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFEL 334 ++F + YQP +D ++ G+E L+RW P+ G IPP+ FI AE I + Q + Sbjct: 532 KEFELYYQPQIDINTNKLIGVEALIRWHSPIMGNIPPNKFIKIAEETGSIEKIGQWVMNT 591 Query: 335 IARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDML 394 A+ + ++ INI+P+ L S F +D++K++ I +EITE + Sbjct: 592 AAKQIGIWNEKFDSNIRMSINISPNQLVSIDFASDLEKIMKKYGLKSDWIDIEITENIAM 651 Query: 395 K-EQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITS 453 K E Q+F L ++G+ I+IDDFGTG+S+L Y+++F+ + LKI + I+ I + Sbjct: 652 KGEGIFKQIFLTLDNMGISISIDDFGTGYSSLSYIQKFSFNRLKIAKELIDNITIDLNKR 711 Query: 454 PVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 ++ A++ L++ LN+LT+AEGVET +Q + E G N +QGY S+P+ D F Sbjct: 712 HIVKAIVMLSEGLNILTIAEGVETEDQLNIVKEIGCNQVQGYVYSKPVTADRF 764 >UniRef50_A1AMG1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AMG1_PELPD Length = 718 Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 92/251 (36%), Positives = 134/251 (53%), Gaps = 9/251 (3%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 A ++E+F++ YQP +D R+ GLE L RW +P G + P +FI AE +I+ L + Sbjct: 461 AFEKEEFFLHYQPQIDCVTNRIIGLEALARWNNPELGLVSPGSFIPLAEETGLIIALDRW 520 Query: 331 LFELIARDAAELEKVLPVG---VKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + + + +LE G V+ +N++ H + IQ++ + A + LE Sbjct: 521 VLATVCK---QLEAWQAAGIPLVRVAVNLSARHFLKANLNKTIQQIRSRGAAARDHLDLE 577 Query: 388 ITERDMLKE--QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 ITE ML E +E + L GV I+IDDFGTG+S+L YL R LKIDR FI+ Sbjct: 578 ITE-GMLMENAEEVVSVLGMLQETGVNISIDDFGTGYSSLSYLTRLPFHTLKIDRSFISQ 636 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 G ++ V+ A++ LA L VAEGVET Q ++L E G +QGY SRPLP D Sbjct: 637 SGDNVESASVVTAIIALAHSLGKEVVAEGVETSTQLQFLKENGCRVIQGYLFSRPLPEDK 696 Query: 506 FVRWLKKPYTP 516 L++ P Sbjct: 697 IRELLREGRIP 707 >UniRef50_Q3JCS1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Nitrosococcus oceani RepID=Q3JCS1_NITOC Length = 571 Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 83/252 (32%), Positives = 136/252 (53%), Gaps = 5/252 (1%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 RM +E+ A + + Y+ +QP ++ R +G E LLRWRHP G + FI AE Sbjct: 312 RMALAKELQRAFETDNLYLQFQPQLNLATHRTSGFEALLRWRHPQHGMLARQTFIRLAEE 371 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +IVP+ E + ++ ++ +N++P I +L Sbjct: 372 TGLIVPIGAWALETACQTCMGWRQLRAGPLRVAVNLSPRQFRQPDLAGSIATILEKTGLA 431 Query: 381 HFQIVLEITERDMLKEQEATQLFAWLHSV---GVEIAIDDFGTGHSALIYLERFTLDYLK 437 + +E+TE +L++ ++ F L S+ GV +++DDFGTGH++L YL+ D +K Sbjct: 432 PSALEIEVTEGLLLEDMDSA--FNTLQSLSILGVHVSVDDFGTGHASLSYLKNLPFDSIK 489 Query: 438 IDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWI 497 IDR FI+ I ++ + + AV+ L LN+ VAEGVETPEQ +L ++G + +QGY+I Sbjct: 490 IDRSFIHGIPADSESRTITKAVIALGHSLNLKVVAEGVETPEQLLYLQKQGCDLVQGYFI 549 Query: 498 SRPLPLDDFVRW 509 S+PL + + RW Sbjct: 550 SKPLDVPEAQRW 561 >UniRef50_B6BIT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BIT7_9PROT Length = 794 Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 128/467 (27%), Positives = 210/467 (44%), Gaps = 44/467 (9%) Query: 57 YFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMD 114 Y+ L +R L+ Q A E T A +++ F L+ D T S +M Sbjct: 365 YYDSLTGLANRTLLKDRMHKAIQYAKREQTNLAVMFLDLDHFKLIND--TLGHSVGDDML 422 Query: 115 IPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLF 174 I + E++ + I ++ ++ L G V P++ +F A N+ Sbjct: 423 IHIAEILK-IHIRESDTLSRLGGDEFVILLPSV-----------KSIFDAQNIASKIQHT 470 Query: 175 YSSRQEDYDGVALIIGNTALSTFSSRLMNVNEL---TDMPVRETKIAGIPLTVRLYADDW 231 S+ + D I + +S + N EL D + E K +G R+Y+ Sbjct: 471 LQSKHDIGDHQLYITSSIGVSLYPDHGDNSEELIRNADTAMYEAKNSGRN-NYRIYSQS- 528 Query: 232 TWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALR 291 +G + L + +V+ + G E+ YQ +D++ Sbjct: 529 ----------MGNYVDQQLHLEQDLIQAVKHKAGIEVF-----------YQAKIDSENNF 567 Query: 292 VTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVK 351 ++G E L RWRHP G I PD FI+ AES +++ L + E E K+ VG+K Sbjct: 568 ISGAEALARWRHPTNGLIFPDQFIHIAESTGLMIELGNIIIEESIFQLQEWNKLGLVGLK 627 Query: 352 FGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITER-DMLKEQEATQLFAWLHSVG 410 IN++ + + I +L + Q+ EITE M ++ L ++G Sbjct: 628 IAINLSARQFQDPNLVSFISSMLHNYQVSPSQVEFEITETLSMTNMTNTLRILTELKAIG 687 Query: 411 VEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLT 470 V IAIDDFGTGHS+L YL++F ++ LKIDR F+ I + ++ ++++A L T Sbjct: 688 VSIAIDDFGTGHSSLAYLKKFPINTLKIDRSFVLDIIEDDDDKTIVQTIVSMAHSLGFNT 747 Query: 471 VAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQ 517 VAEGVET E L G + +QGY+ S+P+P D+F +++ + Y P Sbjct: 748 VAEGVETLEHVALLKTMGCDQLQGYYFSKPIPKDEFTKFI-QDYMPN 793 >UniRef50_B1XQ65 Sensory box/GGDEF family protein n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XQ65_SYNP2 Length = 570 Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 86/249 (34%), Positives = 135/249 (54%), Gaps = 1/249 (0%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R + R++ A++RE+ + YQP +D + +TG E LLRWRH G I P FI AE+ Sbjct: 313 RFQLERDLYRALEREELELFYQPQIDVKTGNITGAEALLRWRHHEHGFISPGIFIPIAEA 372 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +I+ ++ + + + K + +N++ D+ K+L Sbjct: 373 SDLIINISDWVLKTACYQNQQWTKDGFPELCVAVNLSGKQFQQPQLVDDVSKILKETSLK 432 Query: 381 HFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 Q+ LEITE ++ Q A + LH++G+ A+DDFGTG S+L YL+RF+LDYLKID Sbjct: 433 PSQLELEITEGLLINNIQNAVKTLEDLHNLGLITALDDFGTGFSSLSYLKRFSLDYLKID 492 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 + F+ I + + ++++ LA L + +AEGVET EQ +L G N +QGY+ SR Sbjct: 493 QSFVRGIPLDKDDVAITNSIIALAHSLQIEVIAEGVETIEQVNYLKSVGCNKLQGYYYSR 552 Query: 500 PLPLDDFVR 508 P+ DF Sbjct: 553 PICAKDFAE 561 >UniRef50_Q1K1R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1R0_DESAC Length = 709 Score = 157 bits (398), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 90/254 (35%), Positives = 139/254 (54%), Gaps = 5/254 (1%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 E+ AI++EQ + YQP D ++ G+E L+RW HP G IPP FI AE +I+P Sbjct: 455 ELRLAIEQEQLELHYQPQYDLNTGQLVGMEALVRWNHPEKGMIPPGEFIPQAEETSLIIP 514 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLT--SLPAHHFQI 384 L + + R A + ++ +NI+ + + KLL LPA + Sbjct: 515 LGEWVLNTACRQIAAWHAMGISPIRMAVNISAVQFYRIDLAQMVAKLLDHYGLPATLLE- 573 Query: 385 VLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFI 443 LEITE ++ + EA + L ++G++++IDDFGTG+S+L YL+RF + LKIDR FI Sbjct: 574 -LEITESVLMDDVEAAAETMNKLTAMGIQLSIDDFGTGYSSLSYLKRFPISTLKIDRSFI 632 Query: 444 NAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPL 503 N + + + ++++LA + + +AEGVET EQ +L + QGY +RPLP Sbjct: 633 NDVTINEQDAAIALSIISLAGHMGIEVLAEGVETVEQLSFLQRHACQYGQGYLFNRPLPA 692 Query: 504 DDFVRWLKKPYTPQ 517 D R LK + P+ Sbjct: 693 KDIERQLKTAHLPE 706 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 157 bits (397), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 94/259 (36%), Positives = 145/259 (55%), Gaps = 11/259 (4%) Query: 257 LMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFIN 316 LM R+R A+++EQ Y+ YQP D R+ G E LLRWR P G I P FI Sbjct: 374 LMENRLR------RAMEQEQLYLVYQPQYDMAGQRLLGCEALLRWRDPDEGLIMPGRFIP 427 Query: 317 FAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLT- 375 AE +IVPL + + + R A+ + ++ +N++ L F D+++ L Sbjct: 428 VAEDTGLIVPLGRWVLDQACRQASLWLRAGLEPMRVAVNVSAHQLMRHDFIDDVREALQR 487 Query: 376 -SLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTL 433 +LP H + LE+TE ++ + + A++ A + ++GV +AIDDFGTG+S+L YL+RF Sbjct: 488 HALPGHCLE--LEVTESTLMADADLASRQLAVIKAMGVRLAIDDFGTGYSSLAYLKRFAP 545 Query: 434 DYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQ 493 D +KIDR FI+ + + + ++ A++ LA L M T+AEGVE Q R+L G MQ Sbjct: 546 DLVKIDRSFISDLPGDEENAAIVSAIVHLAGALGMETLAEGVENENQQRFLQTLGCEAMQ 605 Query: 494 GYWISRPLPLDDFVRWLKK 512 GY + PL + R L++ Sbjct: 606 GYLLGSPLAEEMMTRRLEQ 624 >UniRef50_C9RWE1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacillus RepID=C9RWE1_GEOSY Length = 818 Score = 157 bits (397), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 91/255 (35%), Positives = 140/255 (54%), Gaps = 9/255 (3%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 +M R++ A++ E+F + YQP + +V G+E L+RWRHP G + P FI AE Sbjct: 559 KMAMERDLRRALENEEFELYYQPQIRLHDRQVIGMEALIRWRHPEKGMVSPSLFIPVAEQ 618 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLT--SLP 378 MI+P+ + + +L P + IN++P S F + +LL LP Sbjct: 619 TGMIIPINEWVIRTACEQTKQLLDRFP-DLSVSINLSPYEFESRRFVDKLARLLADAGLP 677 Query: 379 AHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKI 438 HH LEITER + + A + + L +GV I++DDFGTG+S+L YL +D LKI Sbjct: 678 PHHLD--LEITERMTMDTERALDILSKLKGLGVTISMDDFGTGYSSLSYLTDLPIDRLKI 735 Query: 439 DRGFINAI-GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWI 497 DR F+ I G + + +L A++ L + + +AEGVET +A +L + + QGY+ Sbjct: 736 DRSFVQHIQGKKDV---ILPAIIRLGHNIGVKVLAEGVETETEAAYLQGKRCDEAQGYYF 792 Query: 498 SRPLPLDDFVRWLKK 512 S PLP D+ VR+L + Sbjct: 793 SPPLPYDELVRFLNE 807 >UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2C0_METRJ Length = 703 Score = 157 bits (397), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 89/251 (35%), Positives = 134/251 (53%), Gaps = 5/251 (1%) Query: 266 REIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIV 325 R++ AI+ ++ + YQP V T R+ G E L+RW HP G +PP+AFI AE +I+ Sbjct: 445 RDLRQAIEGDELILYYQPQVSTGTGRLLGFEALVRWEHPTRGLVPPNAFIPLAEESGLIL 504 Query: 326 PLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIV 385 PL + + R+AA L K +N++P + +LT ++ Sbjct: 505 PLGEWVLRAACREAARWAHPL----KVAVNLSPRQFQQADLPERVLAILTETGLAPTRLE 560 Query: 386 LEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFIN 444 LEITE ++ + A + L + GV IA+DDFGTG+S+L L+ F D +KIDR F+ Sbjct: 561 LEITETLIINDMARALGILRRLKAFGVSIAMDDFGTGYSSLATLQAFPFDKIKIDRSFVG 620 Query: 445 AIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLD 504 + + ++ AVL L + L M VAEGVET Q R+L+ + QGY IS+P P++ Sbjct: 621 HVEVSPQAAVIVRAVLGLGRSLGMSVVAEGVETDAQMRFLAAEACDEAQGYLISKPQPIE 680 Query: 505 DFVRWLKKPYT 515 F + P T Sbjct: 681 RFAEQIDAPET 691 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 157 bits (397), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 96/256 (37%), Positives = 148/256 (57%), Gaps = 12/256 (4%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQ- 329 A+ R QF + YQP V RV G E LLRW HP G + P F+ AES +I + + Sbjct: 751 ALDRGQFSLHYQPQVSLADGRVVGAEALLRWTHPEFGPVSPGEFVPIAESNGLIAQIGEW 810 Query: 330 HLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLL--TSLPAHHFQIVLE 387 L E +A+ L++ LP V +N++ + + + +++ LP H Q+ LE Sbjct: 811 VLREAVAQSRRWLDEGLPPLV-MAVNLSAAQFRNPNLPELVSQVIEEAGLPPH--QVELE 867 Query: 388 ITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE + + Q A ++ L + G+ ++IDDFGTG+S+L YL+RF + LKID+ F+ I Sbjct: 868 LTEAVAMDDPQSAVRVMDALFARGIRMSIDDFGTGYSSLGYLKRFKVGKLKIDQSFVRDI 927 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 G + ++ A++ LA L MLTVAEGVET +Q +L ++G + +QGY+ SRPLP + F Sbjct: 928 GDDPDDKAIVSAIIHLAGSLGMLTVAEGVETLDQLDFLRQQGCDTVQGYYFSRPLPAEAF 987 Query: 507 VRWLKK-----PYTPQ 517 V +L++ P PQ Sbjct: 988 VGYLQESGALTPSPPQ 1003 >UniRef50_Q89WT2 Bll0596 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89WT2_BRAJA Length = 833 Score = 157 bits (397), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 95/256 (37%), Positives = 133/256 (51%), Gaps = 6/256 (2%) Query: 257 LMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFIN 316 LM R R++ AI QF + YQP V +V G E LLRW HP G + P FI Sbjct: 571 LMHARRNLERDMRDAIVGRQFELHYQPFVSPATGKVNGFEALLRWHHPQQGLVMPSEFIP 630 Query: 317 FAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTS 376 AE +IVPL + + +AA+ P V+ +N++P S+ + L S Sbjct: 631 LAEETGLIVPLGEWVLRAACAEAAK----WPPHVRIAVNLSPAQFRSKELVPVVIGALAS 686 Query: 377 LPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDY 435 ++ LE+TE ++ + EA + L +GV IA+DDFGTG+S+L +L++F D Sbjct: 687 SGVAPHRLELEVTETVIMHDSEAVFAVLGQLRELGVRIALDDFGTGYSSLSFLQKFPFDK 746 Query: 436 LKIDRGFINAIGTETITSPVL-DAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQG 494 +KIDR F+N + + + L AV+ A L T AEGVET EQ L E G QG Sbjct: 747 IKIDRSFVNELSSARAEARHLARAVVRFAVSLGKTTTAEGVETKEQLDILCEEGCLETQG 806 Query: 495 YWISRPLPLDDFVRWL 510 Y+ SRP+P D R L Sbjct: 807 YYFSRPMPASDIARML 822 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 86/249 (34%), Positives = 139/249 (55%), Gaps = 5/249 (2%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 ++ A+ R +F + YQP +D + R+ G+E LLRW+HP G I P F+ E +IVP Sbjct: 572 DLRRALDRGEFRLHYQPQLDLRDNRIAGVEALLRWKHPRDGVIAPGDFVPLLEDTGLIVP 631 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTS--LPAHHFQI 384 + + + + V+ +N++ ++ ++++L +P HH + Sbjct: 632 VGEWVLRNACTQYRACRESGVAPVRISVNVSARQFREDTLLRQVEQVLREECMPPHHLE- 690 Query: 385 VLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFI 443 LEITE +++ AT + A L ++GV +AIDDFGTG+S+L YL+RF LD LKID+ FI Sbjct: 691 -LEITESTAMQDVAATGDILAALDALGVRLAIDDFGTGYSSLAYLKRFPLDALKIDQAFI 749 Query: 444 NAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPL 503 + + + +A ++L +L + VAEGVET EQ +L R + +QG+ SRPLP Sbjct: 750 RDAPRDANIAAIAEASISLGHKLGLEVVAEGVETAEQLAFLRRRACDLIQGFHFSRPLPA 809 Query: 504 DDFVRWLKK 512 D +L + Sbjct: 810 DALTPFLAR 818 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 86/247 (34%), Positives = 137/247 (55%), Gaps = 5/247 (2%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+R E+ AI+ + + YQP VD + GLE L+RW HP+ G + P +FI+ AE Sbjct: 650 RLRIEGELRHAIELNELVLHYQPQVDLHTGAIVGLEALVRWNHPILGMVQPGSFISLAEE 709 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLL--TSLP 378 +I+P+ + + R A + + ++ +N++ S I+ L T L Sbjct: 710 TGLIIPIGAWVLQTACRQAKAWQDMGFTQLRIAVNLSARQFTQASLLESIKDTLQETGLE 769 Query: 379 AHHFQIVLEITERDMLKEQEATQL-FAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLK 437 A +I E+TE ++ + E L L S+GV++++DDFGTGHS+L YL+RF +D LK Sbjct: 770 ARFLEI--ELTESSVMADIERNILTLRDLKSLGVQLSVDDFGTGHSSLAYLKRFPIDTLK 827 Query: 438 IDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWI 497 IDR F+ I + ++ ++++LA L + +AEGVET Q L +G N +QGY+ Sbjct: 828 IDRSFVRDIAINQDDASIVSSIISLAHNLKLNVIAEGVETASQMDILRAQGCNEIQGYYF 887 Query: 498 SRPLPLD 504 +PLP D Sbjct: 888 CKPLPSD 894 >UniRef50_Q1LGY0 EAL-containing signal transduction protein n=2 Tax=cellular organisms RepID=Q1LGY0_RALME Length = 536 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 89/277 (32%), Positives = 153/277 (55%), Gaps = 13/277 (4%) Query: 238 YAFLLGGMSGTVVGLLCYYLMSVRMRPG--REIMTAIKREQFYVAYQPVVDTQALRVTGL 295 + LLGG L+ + +R R G R++ A++ ++ +AY P+V+ ++ + G Sbjct: 254 FGALLGG------ALVALARLGLRRRHGLLRQLDRALRDDELSLAYMPIVELESGKWIGA 307 Query: 296 EVLLRWRHPVAGE-IPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGI 354 E L+RW H G+ I PD FI AE I LT + +L+ DA L + L + F + Sbjct: 308 EALMRWCHD--GQWIAPDKFIPLAERHHRIRKLTNRMLDLLVADAQALPRDLARAMYFSV 365 Query: 355 NIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIA 414 N++ + L + + + + + +++E TE +L+ L +G+ +A Sbjct: 366 NLSAEDLAACAIAQRVADVRQACGVD--GVMVEATEGVLLEASRVIPNIERLRKLGIRVA 423 Query: 415 IDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEG 474 IDDFGTG+S+L YL +DY+KID+ F++AIGT ++ V+ ++ +AK + + +AEG Sbjct: 424 IDDFGTGYSSLSYLGSLDVDYIKIDKSFVSAIGTNSVRGHVVAHIIDMAKDVGVAVIAEG 483 Query: 475 VETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 VET EQA +L RGV + QG+ + +P+ DFV ++ Sbjct: 484 VETQEQADYLMARGVRYAQGWLFGKAMPMQDFVSAIR 520 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 85/229 (37%), Positives = 133/229 (58%), Gaps = 3/229 (1%) Query: 276 QFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQ-HLFEL 334 +F + YQP VD + +V G+E L+RW P G IPP FI AE +I PL++ L E Sbjct: 791 EFLLHYQPQVDIETGQVVGMEALVRWHDPEVGLIPPSQFIPVAEESGLIGPLSEWVLREA 850 Query: 335 IARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDML 394 ++ A ++ LP + +N++ + ++L + LE+TE ++ Sbjct: 851 CRQNKAWQDEGLPP-ARVSVNLSARQFQQRDIAKLVMQVLEETGLDPQYLELELTESTIM 909 Query: 395 KE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITS 453 + +EA + LH++G+ +AIDDFGTG+S+L YL+RF +D LKIDR F++ IG + Sbjct: 910 RNAEEAVSMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGESSDDE 969 Query: 454 PVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 + A++ LA LN+ +AEGVET Q +L ER + MQGY+ ++PLP Sbjct: 970 TITSAIIALAHSLNLQVIAEGVETSTQLDFLKERACDEMQGYFFAKPLP 1018 >UniRef50_Q5QW01 Intracellular signaling protein (GAF,PAS,GGDEF,EAL domains) n=1 Tax=Idiomarina loihiensis RepID=Q5QW01_IDILO Length = 766 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 83/251 (33%), Positives = 143/251 (56%), Gaps = 6/251 (2%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 +I A+ +EQF + YQP++ T +V G E L+RW+HP G + P FI AE I+P Sbjct: 515 KIQEALAQEQFELFYQPIM-TDKGQVAGAEALIRWQHPTKGYVSPADFIPVAERTGQIIP 573 Query: 327 LTQHLFELIARDAAELEKVLPVGVK-FGINIAPDHLHSESFKADIQKLLTSLPAHHFQIV 385 +++ + + RD L+++ G+K +N +P + E F + + +L +I Sbjct: 574 ISEWVLKQACRD---LQQLKLYGIKSVSVNFSPIQFYREDFVSKTKAILEQFDIKPGEIT 630 Query: 386 LEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFIN 444 +EITE ++ + Q +L L +G+++AIDDFG+G ++L YL ++ LKIDR FI Sbjct: 631 VEITENVLVNDTQRIAELLQQLRDLGLDVAIDDFGSGFASLRYLNMLPVNKLKIDRSFIE 690 Query: 445 AIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLD 504 I + + + +L++ + + TVAEGVE E+ +L E G +FMQG+ S+P PL Sbjct: 691 NIHENSHNAAITCGILSMVAGIGIETVAEGVEKEEECAYLVEHGCHFMQGFLFSKPKPLG 750 Query: 505 DFVRWLKKPYT 515 + ++W ++ + Sbjct: 751 ELLKWAERQQS 761 >UniRef50_A1U286 Diguanylate cyclase/phosphodiesterase n=2 Tax=Marinobacter RepID=A1U286_MARAV Length = 692 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 92/267 (34%), Positives = 145/267 (54%), Gaps = 14/267 (5%) Query: 255 YYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGE 308 +Y+ S+ R + +++ A+ +F++ YQP ++ + RV G E LLRW HP G Sbjct: 419 FYVASIDKEIRERKQMEKDLAQALANHEFHLVYQPQINLETRRVIGAEALLRWEHPEHGM 478 Query: 309 IPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKA 368 IPPD FI AE+ IV + Q + + AA ++ +N++ L ES Sbjct: 479 IPPDLFIPVAEANGSIVEIGQWVLDQACWQAARWASE-GTHLRIAVNLSAVQLRQESIVD 537 Query: 369 DIQKLLTSLPAHHF---QIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSA 424 DI L +L H+ ++ LE+TE + +A LH G+ IA+DDFGTG+S+ Sbjct: 538 DI---LNTLKRHNIPAGRLELEVTETSFMTNLTDAVAKLHRLHRAGISIAVDDFGTGYSS 594 Query: 425 LIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWL 484 L YL++ + +LKID+ FI + + + + ++ L K LN+ VAEGVET EQ +L Sbjct: 595 LTYLKQMPVQHLKIDKQFIRDLLINEEDTRIANTIIDLGKSLNLTVVAEGVETAEQEYYL 654 Query: 485 SERGVNFMQGYWISRPLPLDDFVRWLK 511 S+RG QGY+ S+PL DF +++ Sbjct: 655 SQRGCALAQGYFFSKPLLPRDFANFVQ 681 >UniRef50_B9ZR05 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZR05_9GAMM Length = 649 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 84/248 (33%), Positives = 135/248 (54%), Gaps = 2/248 (0%) Query: 266 REIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIV 325 +E+ TAI+++Q + YQP VD + G E L+RW+HP G +PP FI AE +I Sbjct: 393 KELGTAIEQDQLVLHYQPKVDLHTGDILGAEALIRWQHPKLGLLPPSHFIELAEDMTLIE 452 Query: 326 PLTQHLFELIARDAAEL-EKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQI 384 + + + + RD L + G + IN++ L D +L + I Sbjct: 453 AIGEWVLRQVCRDLKRLPSQGRDHGFRVAINVSARQLRQPDLAGDFHAILQAANVAPECI 512 Query: 385 VLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFI 443 LE+TE ++ + + A ++F L +G+ +A+DDFGTGH++LI L++ D LKIDR F+ Sbjct: 513 ELELTETTIMDDPKGAARMFGRLREIGMRLAVDDFGTGHASLIQLKKLPADTLKIDRSFV 572 Query: 444 NAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPL 503 + + ++ A++ +A L + +AEGVET QA L E G N QGY+ +RP+ Sbjct: 573 QDLERSNSDARIVQAIVQMAHTLGLNIIAEGVETERQAEILREFGCNEAQGYFFARPMAF 632 Query: 504 DDFVRWLK 511 +DF L+ Sbjct: 633 NDFHALLQ 640 >UniRef50_Q88HN4 Sensory box protein/GGDEF domain protein n=1 Tax=Pseudomonas putida KT2440 RepID=Q88HN4_PSEPK Length = 733 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 89/238 (37%), Positives = 129/238 (54%), Gaps = 5/238 (2%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 ++ AIK + F + YQP ++ + RV G+E LLRW HPV G I P FI AE I+P Sbjct: 487 DLQKAIKTQSFSLHYQPQIEARTRRVVGIEALLRWEHPVRGFISPAVFIPVAEDSGQIIP 546 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 L+ + + +L G+ +NI+P H F IQ +L+ Q+ L Sbjct: 547 LSLWVLDTACAQLRDLCDQGFNGISMAVNISPMHFQCGQFVECIQAVLSKHGLSAGQLEL 606 Query: 387 EITERDMLKEQEATQLFAWLH---SVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFI 443 EITE +L E Q A LH +GV IA+DDFGTG S+L YL+ +D +KIDR FI Sbjct: 607 EITESLLLHNVE--QAIATLHRLKDLGVRIALDDFGTGFSSLSYLKCLPIDKIKIDRSFI 664 Query: 444 NAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPL 501 I T + + ++++A L++ VAEGVET Q +L + +QGY+ +RP+ Sbjct: 665 QDISTNPHDAAITQGIISMAHHLSLSVVAEGVETAPQVNFLERGRCDILQGYYFARPM 722 >UniRef50_D1B3P2 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B3P2_SULD5 Length = 762 Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 89/258 (34%), Positives = 145/258 (56%), Gaps = 5/258 (1%) Query: 256 YLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGE-IPPDAF 314 +L ++ M +E+ AIK + ++ YQP VDTQ V G+E L+RW G+ +PPD F Sbjct: 502 FLKNITME--QELRKAIKNNELFMVYQPQVDTQG-NVFGVEALVRWNSTAFGKLVPPDQF 558 Query: 315 INFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLL 374 I AE+ ++ L + +FE D A LE+ L ++ +N++ F D+ +L Sbjct: 559 IPLAEATGLMPKLGRLIFETACYDIAALEQELKRSLQISLNVSVRQFMDPLFLEDLLNIL 618 Query: 375 TSLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTL 433 H I LE+TE ++E L + S+G++I++DDFGTG+S+L L + + Sbjct: 619 DKTDLHTLNITLEVTENLFIEELHYIVPLLEKIKSLGIQISMDDFGTGYSSLSMLRQLPI 678 Query: 434 DYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQ 493 D LKID+ F+ I + ++ ++ ++T+ K LNM +AEGVET EQ L+ G + Q Sbjct: 679 DELKIDKSFVYTIDKDETSAKMVQNIITIGKNLNMHILAEGVETQEQKELLTAFGCDRFQ 738 Query: 494 GYWISRPLPLDDFVRWLK 511 GY+ S+PL + + +LK Sbjct: 739 GYYFSKPLNKEALLAFLK 756 >UniRef50_B7KYX3 Diguanylate cyclase/phosphodiesterase n=4 Tax=Methylobacterium RepID=B7KYX3_METC4 Length = 541 Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 88/240 (36%), Positives = 126/240 (52%), Gaps = 5/240 (2%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 E+ AI+ YQPVV GLEVL RWRHP G + PD FI AE MI Sbjct: 265 ELREAIEHGAIEPFYQPVVSLPRRDCVGLEVLARWRHPTRGLLGPDQFIPIAEETGMIAD 324 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 L+ HL DA K P + INIAP + I +L ++ + Sbjct: 325 LSYHLLRQACLDA----KAWPSHLLLAINIAPQQVQDRDLAQRILAILAETGFSPRRLEV 380 Query: 387 EITERDMLKEQEATQL-FAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 EITE ++++ EA + L ++GV IA+DDFGTG+S+L +L D LKIDR +++ Sbjct: 381 EITETALVQDLEAARTTLTSLQNLGVRIALDDFGTGYSSLYHLRELKFDKLKIDRSYVDT 440 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 I + ++DA++ L L ++T AEG+ET WLS +G +F QGY +P+P ++ Sbjct: 441 ITMSEERAKLVDAIIKLGSSLGLVTTAEGIETDASVAWLSGQGCSFGQGYLFGKPMPREE 500 >UniRef50_Q5R0L9 Signaling protein with a sensor domain, CHASE, GGDEF and EAL domains n=1 Tax=Idiomarina loihiensis RepID=Q5R0L9_IDILO Length = 712 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 96/257 (37%), Positives = 148/257 (57%), Gaps = 18/257 (7%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 RMR G +KR +FY+ YQP++D +++ E LLRW+ I P FI AE Sbjct: 464 RMREG------LKRHEFYLVYQPIIDFSTGKISKCEALLRWQDEDGNMISPAEFIPVAER 517 Query: 321 QKMIVPLTQHLFELIARDAAELEKV-LPVGVKFGINIAPDHLHS-ESFKADIQKLLTSLP 378 +I L Q + E D A + K P+ V IN + L+ ES K + L+ + Sbjct: 518 TGLIHELGQFVLEQACVDWAVVHKSGYPIEV--SINRSERELNDMESAK----RWLSCIS 571 Query: 379 AH---HFQIVLEITERDML-KEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLD 434 H + I EITE ++ +Q Q+ +L S GV++AIDDFGTG+S++ YL+R+ +D Sbjct: 572 QHGIPNTSITFEITESLLMSNKQRQLQILHYLRSQGVQLAIDDFGTGYSSINYLQRYPVD 631 Query: 435 YLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQG 494 Y+KIDR F++ + +LDA+L +A+ L++ +AEGVET +Q L + +F QG Sbjct: 632 YIKIDRSFLSQAPQNKVQVALLDALLQVARALDINVIAEGVETRQQWELLQRQRCDFAQG 691 Query: 495 YWISRPLPLDDFVRWLK 511 Y+IS PLPL++ +++LK Sbjct: 692 YFISEPLPLNELLKFLK 708 >UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31G31_THICR Length = 891 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 81/245 (33%), Positives = 138/245 (56%), Gaps = 7/245 (2%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+ + A+ +QF + YQP VD ++ G E L+RW H G IPPD FI AE Sbjct: 633 RLLMENNLRDALDNQQFELYYQPQVDITTNKIVGFEALVRWNHEQKGIIPPDHFIPLAEE 692 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +I+PL + + + ++ +E + + IN++ L F L T+L + Sbjct: 693 TGLIIPLGKQIIAMASQTISEWHQANLTNARIAINVSAKQLRDSRF---FHNLNTALNKN 749 Query: 381 HFQ---IVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYL 436 + Q I +EITE +++ E A +L + L G+ I+IDDFGTG+S+L YL++ + + Sbjct: 750 NCQPDWIEIEITESSVMQNPELAIKLLSKLRRKGITISIDDFGTGYSSLAYLKKLPITKV 809 Query: 437 KIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYW 496 KIDR F++ + + + + A++++++ LN+ +AEG+ET EQ ++ + G +QGY+ Sbjct: 810 KIDRSFVSNLPQDKDDAEITKAIISMSQSLNLDIIAEGIETQEQQNFVLQEGCKLIQGYY 869 Query: 497 ISRPL 501 SRPL Sbjct: 870 YSRPL 874 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 83/241 (34%), Positives = 134/241 (55%), Gaps = 1/241 (0%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 A+K QF + YQP +D ++ R+ G E L+RW HP G I PDAFI AE +IV + Sbjct: 686 ALKLGQFELYYQPQLDVKSNRIIGAEALIRWNHPEKGMISPDAFIPLAEESGLIVDIGSW 745 Query: 331 LFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITE 390 + + A+ K + +N++ + ESF ++ ++ + LE+TE Sbjct: 746 VLHQASSQLAQWRKQGFDQLSVSVNLSALQVQKESFAREVADVIREYGVPEACLDLELTE 805 Query: 391 RDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTE 449 +++ E T +H++G++I++DDFGTG+S+L YL+RF LD LKIDR F+ I + Sbjct: 806 SMIMRNAEETIAALDKIHNLGIQISVDDFGTGYSSLSYLKRFPLDKLKIDRSFVQDITVD 865 Query: 450 TITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRW 509 T + + ++++A LN+ +AEGVET Q L + G QGY ++PLP++ Sbjct: 866 TDDAMICKTIISMAHNLNLQVIAEGVETNAQLELLRDYGCEQYQGYLFAKPLPVEQMTEH 925 Query: 510 L 510 L Sbjct: 926 L 926 >UniRef50_Q98BI1 Mll5564 protein n=2 Tax=Mesorhizobium RepID=Q98BI1_RHILO Length = 514 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 86/238 (36%), Positives = 130/238 (54%), Gaps = 5/238 (2%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 E+ TA +R F + YQP +D R+ G E L+RW HP G IPP FI AE MI P Sbjct: 261 ELHTAFERGDFDLHYQPQLDLPTGRIIGYEALIRWNHPERGMIPPMEFIQIAEETGMINP 320 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 + E + R A LP +NI+P ++ F ++ + + ++ L Sbjct: 321 IG----EWVLRKACSDAHHLPDDCFVAVNISPVQFMTKDFVGIVRDTMRATGIKPSRLEL 376 Query: 387 EITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 E+TE M+++++ A + L +G+ +A+DDFGTG+S L YL F+ LKIDR F++ Sbjct: 377 EVTETAMMQDRDRAAAILKELAEMGISVAVDDFGTGYSNLSYLIDFSFGKLKIDRSFVSR 436 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPL 503 IGT++ + V+ ++ L++ L + +AEGVET QA L G +QGY RP PL Sbjct: 437 IGTDSSSGAVVSTIVGLSRALGVSIIAEGVETESQATLLRAAGCEVVQGYLFGRPAPL 494 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 91/243 (37%), Positives = 137/243 (56%), Gaps = 11/243 (4%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP---- 326 A++R +F + YQP + + G E LLRWRHP G +PP FI AE +I P Sbjct: 545 ALERHEFELHYQPQLSAGERALAGAEALLRWRHPQLGLVPPARFIALAEETGLIKPIGDW 604 Query: 327 -LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIV 385 L + +L A DA L +P + +N++P S A + L + ++ Sbjct: 605 VLREACRQLAAWDAQGLR--VP---RLAVNLSPRQFGQPSLPAKVAGALQAAGLAAGRLE 659 Query: 386 LEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFIN 444 LEITE +++ EA L + L S+GV ++IDDFGTG+S+L +L+RF LD LKID+ F+ Sbjct: 660 LEITESMIMQSPTEAVSLLSELKSLGVWLSIDDFGTGYSSLSHLKRFPLDTLKIDQSFVE 719 Query: 445 AIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLD 504 + + + + +A+L +AK+L VAEGVE+ EQA +L +G + +QGY RPLP Sbjct: 720 GLPDDDDNAAIAEAILAMAKKLKFQVVAEGVESEEQAAFLEGKGCHVLQGYHFGRPLPAG 779 Query: 505 DFV 507 +F Sbjct: 780 EFA 782 >UniRef50_B6QZ75 Rtn protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZ75_9RHOB Length = 548 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 85/250 (34%), Positives = 139/250 (55%), Gaps = 2/250 (0%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 + + +I+ +F YQPVVD + G E+L+RW+ P +PP F+ +AE+ I Sbjct: 270 DFVASIRNNEFIPYYQPVVDIVTGELQGCEMLMRWQLPNGKMVPPGQFMTYAETSGHIFE 329 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 +T+ + D EL P +K +N+ H + S D+ + P Q+V+ Sbjct: 330 MTRSIMRQSIDDLGELYSKHP-ELKLSVNLFAGHFNDRSIVDDLLDIYEDSPIALNQVVM 388 Query: 387 EITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 E+TER L++ + A ++ A L + G+ +A+DD GTGH L YL++ +D +KID+ FI+ Sbjct: 389 EVTERQPLEDIDLARKIIAELQAHGIRVALDDVGTGHGGLAYLQKLGMDIVKIDKMFIDP 448 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 +G+E ++DA+ LA +NM +AEGVE EQ L E GV+ QGY S+PLP Sbjct: 449 LGSEENAFRLVDAIAELADTMNMGIIAEGVEKYEQIVLLRELGVSSAQGYIFSKPLPARK 508 Query: 506 FVRWLKKPYT 515 ++ + + +T Sbjct: 509 YLEFAEDIFT 518 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 91/261 (34%), Positives = 145/261 (55%), Gaps = 7/261 (2%) Query: 260 VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAE 319 R+ + + AI ++F V YQP + + ++ G E LLRW P G IPP FI+ AE Sbjct: 825 ARLELEQRLHRAITGQEFKVFYQPQISIKTNQIIGAEALLRWDDPEYGLIPPSEFISVAE 884 Query: 320 SQKMIVPLTQH-LFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLL--TS 376 +I + + L+E + L++ LP + +N++P LH + I +L + Sbjct: 885 ETGLIQNIGEWVLYETCRQGRDWLDQHLPP-INLAVNLSPLQLHHGDVRQLIGTILHNSG 943 Query: 377 LPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDY 435 PAHH + LE+TE ++++QE T ++ L G+ IAIDDFGTG+S+L YL++F LD Sbjct: 944 FPAHHLE--LELTESALMEQQEETVKILQGLRQQGIRIAIDDFGTGYSSLAYLKQFPLDV 1001 Query: 436 LKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGY 495 LKID+ F+ I E + ++ + L + +AEGVET Q +L ++G ++ QGY Sbjct: 1002 LKIDKRFVEDIPHERDDMEIAATIVAMGHSLRLTVLAEGVETKAQLEFLEQQGCDYYQGY 1061 Query: 496 WISRPLPLDDFVRWLKKPYTP 516 S PLP ++F + L + P Sbjct: 1062 LYSMPLPAEEFAQLLSQQNPP 1082 >UniRef50_Q47EK9 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47EK9_DECAR Length = 963 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 86/237 (36%), Positives = 131/237 (55%), Gaps = 1/237 (0%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 ++ A R +F + YQP R+TG+E LLRW+HP G + PD FI E +IV Sbjct: 444 DLRHATLRNEFVLYYQPKASCADGRITGVEALLRWQHPERGIVSPDQFIPLLEETGLIVQ 503 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 + + + E R A E + +N++ L +E+ D+ L + + L Sbjct: 504 VGRWVLEEACRQAVEWQAAGLNIPSVSVNLSARQLQAETLLTDVAATLEKTGLNAACLDL 563 Query: 387 EITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 EITE ++ + A Q + L +GV I++DDFGTG+S+L YL+RF LD +K+DR F+ Sbjct: 564 EITESMLMDNADMAIQTLSALKKMGVTISLDDFGTGYSSLAYLKRFPLDAIKVDRSFVQD 623 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 I ++ + + AV+T+A L + VAEGVETPEQ L + +QGY+ SRP+P Sbjct: 624 IAADSDDASITRAVITMAHHLKLKVVAEGVETPEQLALLISHQCDVIQGYFFSRPMP 680 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 84/251 (33%), Positives = 136/251 (54%), Gaps = 1/251 (0%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 ++ A++R++F + YQP V+ + ++ +E L+RW+HP G +PP FI AE +IVP Sbjct: 375 DMRRALERDEFVLHYQPKVNVEHGQIACMEALVRWQHPSMGLVPPSRFIPLAEETGLIVP 434 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 L + + + + ++ +N++P L + ++L +V+ Sbjct: 435 LGEWVLRTACQQNRAWQDAGYPTMQVAVNLSPRQLRQGDLSETVARVLAETGLAPGWLVI 494 Query: 387 EITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 E+TE ++ + E T + F L +GV I+IDDFGTG+S+L YL++F + LKIDR F+ Sbjct: 495 EVTESILMDDAEETIRTFRRLDRMGVRISIDDFGTGYSSLHYLKKFPVHTLKIDRSFVRE 554 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 I + + AV+++AK LN+ VAEGVET EQ L +MQG+ S P P + Sbjct: 555 IASNPDDEAIAGAVISMAKGLNLGVVAEGVETVEQMEVLRALNCRYMQGFLFSEPAPAEQ 614 Query: 506 FVRWLKKPYTP 516 F L TP Sbjct: 615 FTPVLGHAATP 625 >UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZB1_DESAC Length = 1092 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 84/252 (33%), Positives = 142/252 (56%), Gaps = 5/252 (1%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 ++ A+ R+Q + YQP +D Q+ + G E LLRW HP G + P FI AE +IV Sbjct: 831 DLRHALSRDQLELYYQPQLDLQSNCIVGFEALLRWNHPERGLVSPLEFIPLAEETGLIVS 890 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLL--TSLPAHHFQI 384 + + + R + ++ +NI+ H ++K+L T +P + Sbjct: 891 MGEWILRSACRQIRTWNEEHGRQLRVAVNISARQFHHYDLVHCVEKVLEQTGVPTEWLE- 949 Query: 385 VLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFI 443 LEITE ++ + Q + + L +GV +AIDDFGTG+S+L YL++F + LKID+ F+ Sbjct: 950 -LEITESLLMYDIQSSIETMMRLKKLGVRLAIDDFGTGYSSLSYLKKFPICSLKIDKSFV 1008 Query: 444 NAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPL 503 + + T+ + + ++ L LA +++++ VAEG+E EQ +L +RG F QGY ISRPLP+ Sbjct: 1009 DDLLTDASDAAIAESTLALASKMDLMVVAEGIEQQEQLDYLQQRGCQFGQGYLISRPLPV 1068 Query: 504 DDFVRWLKKPYT 515 ++ ++ +T Sbjct: 1069 AQCTQFCRERFT 1080 >UniRef50_B0UAD7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UAD7_METS4 Length = 1034 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 91/277 (32%), Positives = 141/277 (50%), Gaps = 11/277 (3%) Query: 247 GTVVGLLCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLR 300 G GL C + S+ R+ ++ A+ Q +AYQPV D RV+G E L+R Sbjct: 753 GRGRGLACVFEKSIAARLHERLALQSDLAEAVPGGQLVLAYQPVFDLAGGRVSGFEALVR 812 Query: 301 WRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDH 360 W HPV G + P FI AE I + + + RDAA LP G++ +N++P Sbjct: 813 WNHPVRGFVSPAQFIPIAEQTGQIEAIGAFVLDRACRDAA----ALPPGIRVAVNLSPVQ 868 Query: 361 LHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEA-TQLFAWLHSVGVEIAIDDFG 419 L +E I L ++ LEITE ++++ E QL + ++GV I +DDFG Sbjct: 869 LRAEDIVERIATALAESGLAPARLELEITETALMEDSERMVQLLERIRALGVRIVLDDFG 928 Query: 420 TGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPE 479 TG+S+L YL F +KID+ F+ + T + ++ A++ LA L M T AEG+ET + Sbjct: 929 TGYSSLSYLRTFPFHKIKIDQSFVREMTTRANSLAIVSAIVGLADELGMATTAEGIETAD 988 Query: 480 QARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTP 516 ++ + G QGY++ +P P+ L+ P P Sbjct: 989 HLDFVRKVGCREAQGYFLGKPKPILSAFEVLRAPLPP 1025 >UniRef50_C3X4J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Oxalobacter formigenes RepID=C3X4J8_OXAFO Length = 1077 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 88/254 (34%), Positives = 141/254 (55%), Gaps = 3/254 (1%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+R ++ A++ QF + YQP+V+ ++ E L+RW HP+ G + P FI+ AE Sbjct: 819 RIRLANDMRIAVEEHQFEMLYQPIVELGTGKIHKAEALIRWHHPLRGIVSPAEFISIAEE 878 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +I+ ++ F +AR+ + G + NI+P S++ +D L L A Sbjct: 879 TGLILTISDWAFREVAREVGRWRERYYPGFQISFNISPALFQSKTDYSDWFDELARLKAP 938 Query: 381 HFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 IV+EITE +L + H G+EIA+DDFGTG+S+L YL++F +DYLKID Sbjct: 939 GSSIVMEITEGVLLVSNWQVIAQLTEFHRHGMEIALDDFGTGYSSLSYLKKFEIDYLKID 998 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARW-LSERGVNFMQGYWIS 498 + F+ I E + +A++ +A +L+M +AEGV+ E+ RW L+ G ++ QGY S Sbjct: 999 QAFVKNIENEPKDMALCEAMIVMAHKLDMKVIAEGVQN-ERQRWLLAGAGCDYGQGYLFS 1057 Query: 499 RPLPLDDFVRWLKK 512 PL +F L+K Sbjct: 1058 EPLAAAEFENLLEK 1071 >UniRef50_B3PF41 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PF41_CELJU Length = 805 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 86/237 (36%), Positives = 130/237 (54%), Gaps = 8/237 (3%) Query: 276 QFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELI 335 +F + YQP + R+TG EVL RW HP G IPP FI AE MI+PL + Sbjct: 567 EFELHYQPQISLADGRITGFEVLTRWHHPERGTIPPVEFIPLAEESNMIIPLGIWVLVEA 626 Query: 336 ARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLK 395 R A+ P G + +NI+ S +++ L ++ LEITE +++ Sbjct: 627 CRTASHW----PAGWRLAVNISASQFSHGSLVPVVKRALQLSGLAPTRLELEITESLLIQ 682 Query: 396 EQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSP 454 + +T Q+ L ++GV +A+DDFGTG+ +L YL F LD LKIDR F+ A+ + Sbjct: 683 DAHSTRQILGELRTLGVRVALDDFGTGYCSLAYLRSFPLDQLKIDRSFVTALQQDASARA 742 Query: 455 VLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP---LDDFVR 508 ++ ++ LA L++ TVAEG+E+P++A L + G QGY + P+P LD+F R Sbjct: 743 IVSGIIQLANALDLETVAEGIESPQEAAMLRDTGCRLGQGYLYAAPVPGHALDEFCR 799 >UniRef50_Q07HD2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Alphaproteobacteria RepID=Q07HD2_RHOP5 Length = 1223 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 89/243 (36%), Positives = 134/243 (55%), Gaps = 9/243 (3%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 ++ AI Q + YQP+V LRV G+E L+RWRHPV G + PD FI AE +IV Sbjct: 972 DLREAIAGGQMELHYQPIVRLTDLRVCGMEALVRWRHPVRGLLSPDLFIPLAEETGLIVQ 1031 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 L + + DAA P VK +NI+P H+ + L + ++ L Sbjct: 1032 LGEFVVNQACHDAASW----PDHVKVAVNISPTHIKGRGLLGTVTLALLNSQLATERLEL 1087 Query: 387 EITERDMLKEQEATQLFAWLH---SVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFI 443 E+TE +++ E + A LH ++G+ +A+DDFGTG S+L +L F+ D +KIDR F+ Sbjct: 1088 EVTETVLMERDE--DMLAELHQLRALGISVALDDFGTGFSSLSHLRMFSFDKIKIDRSFV 1145 Query: 444 NAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPL 503 I + ++ ++ AV LA+ L+++T AEGVET +Q + L G +QGY RP P Sbjct: 1146 AEITERSDSAAIVCAVTGLARTLDIVTTAEGVETEQQMQILRAAGCTQLQGYLFGRPKPA 1205 Query: 504 DDF 506 D + Sbjct: 1206 DQY 1208 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 87/244 (35%), Positives = 143/244 (58%), Gaps = 5/244 (2%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQ- 329 A++R +F + YQP +D ++ R+ G+E L+RW+HP G +PP FI AE +I+P+ + Sbjct: 664 ALERNEFVIFYQPQMDLKSGRLVGMEALIRWQHPDLGLLPPSRFIPMAEETGLILPIGEW 723 Query: 330 HLFELIARDAAELEK-VLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 L A++ A ++ +P+ V +N+ + F I+ +L Q+ LE+ Sbjct: 724 ALQTACAKNRAWMDAGFMPLRV--AVNLCGIQFRQKKFIELIEAVLKKTGLAPSQLELEL 781 Query: 389 TERDML-KEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE ++ K +E+T + L +GV +AIDDFGTG+S+L YL+ F ++ +KIDR FI + Sbjct: 782 TESMLMSKAEESTTVLHKLKEMGVSLAIDDFGTGYSSLSYLKNFPINRVKIDRSFIRDVP 841 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + ++ A++ +A LN+ AEGVE Q +LS R N +QGY +S PLP +F Sbjct: 842 NNPDDTAIVSAIIAMAHNLNLKVTAEGVENHSQLEFLSTRNCNEIQGYLLSSPLPEAEFT 901 Query: 508 RWLK 511 R+L+ Sbjct: 902 RFLR 905 >UniRef50_Q1H236 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=Q1H236_METFK Length = 722 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 87/250 (34%), Positives = 137/250 (54%), Gaps = 7/250 (2%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 E+ AI+++Q + YQP VD + ++ GLE L RW HP G I P FI AE +I Sbjct: 457 ELRRAIEKKQIMLHYQPQVDVETRKIIGLEALARWHHPELGIISPTEFIPLAEETGLIFS 516 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQ--- 383 L++ L + E + + +N++P + ESF + K L+ + +HH + Sbjct: 517 LSEMLLGEACKQMQLWEAAGLLNFRLALNVSPQLVEEESF---VSKTLSYIQSHHLKPEF 573 Query: 384 IVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGF 442 +EITE ++++ E T L G+ IA+DDFGT +S+L YL +F + +KID+ F Sbjct: 574 FEIEITENLLVRDLENTVAKLKALGKHGIRIALDDFGTCYSSLSYLRQFPIHNIKIDKSF 633 Query: 443 INAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 + I T + P++ A+ +AK + +AEGVET +Q + L + G N MQGY S+PLP Sbjct: 634 VGDINTHDESVPIITAISGIAKGFKLDLIAEGVETLQQMKTLHKMGCNIMQGYLFSKPLP 693 Query: 503 LDDFVRWLKK 512 + LK+ Sbjct: 694 AQNITTLLKR 703 >UniRef50_Q2BIE6 Sensory box/GGDEF/EAL domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIE6_9GAMM Length = 711 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 86/251 (34%), Positives = 135/251 (53%), Gaps = 1/251 (0%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R++ ++ +A+ R +F + YQPV+D + R+ G E LLRW +PV G I P+ FI AE Sbjct: 459 RLQIEEQMHSALGRNEFSLRYQPVLDLKNNRIAGAEALLRWHNPVLGNISPEEFIPIAEQ 518 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +IVP+ + E + A + +N++P I++LL S Sbjct: 519 TGLIVPIGYFVLEQSLKAARKWSTTYSNEFTIAVNLSPLQFKDPKLIVKIKELLASHRLE 578 Query: 381 HFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 + LEITE +L Q + + F L G++I++DDFGTG+S+L YL + LKID Sbjct: 579 GNALSLEITEGVLLGNQIKVQEAFQELSDSGIQISMDDFGTGYSSLNYLREYKFQTLKID 638 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 R F+ + +++A + +A L++ +AEGVE EQ +L +G NF QGY +S+ Sbjct: 639 RSFMQDFALDKSAPALINATIAMAHALDVEVIAEGVEEQEQLDYLIRKGCNFAQGYLLSK 698 Query: 500 PLPLDDFVRWL 510 PL DF +L Sbjct: 699 PLTEQDFEAFL 709 >UniRef50_A3M765 Sensory box protein n=12 Tax=Acinetobacter RepID=A3M765_ACIBT Length = 949 Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 81/249 (32%), Positives = 143/249 (57%), Gaps = 6/249 (2%) Query: 266 REIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIV 325 +E+ AI+ ++F V YQP ++ + G E L+RW+HP G + P+ FI FAE +I Sbjct: 699 QELRKAIQNDEFVVYYQPKINLNDKSIKGFEALIRWQHPEKGLVMPNMFIPFAERSSLIS 758 Query: 326 PLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIV 385 + + + + + + E +K V+ +NI +H +D+ ++L + + Sbjct: 759 DIGKVVLDKVGKQLQEWKKAGYADVRVSVNIVAQQIHRGLLLSDLDEVLDTYHLDGSNLE 818 Query: 386 LEITERDMLKEQEATQLFAWLHSV---GVEIAIDDFGTGHSALIYLERFTLDYLKIDRGF 442 LEITE +L + + LHS+ + IA+DDFGTG+S+L YL + +D LKIDR F Sbjct: 819 LEITESALLDNTDNVK--KLLHSIKERNISIALDDFGTGYSSLAYLTEYPIDVLKIDRAF 876 Query: 443 INAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 ++ IG + +++A++ + K + + VAEGVET EQ +L ++ +F+QG++ SRPL Sbjct: 877 VSKIGDQK-QEAIVNAMIAMGKSMGLKLVAEGVETEEQVIYLQKQQCDFLQGFFFSRPLH 935 Query: 503 LDDFVRWLK 511 + +++L+ Sbjct: 936 PNQILQYLQ 944 >UniRef50_B8GL67 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GL67_THISH Length = 685 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 91/263 (34%), Positives = 136/263 (51%), Gaps = 9/263 (3%) Query: 253 LCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVA 306 CY+ ++ R+R RE+ A+ + QF +QP+V+ + R+ E LLRW HP Sbjct: 409 FCYFTHALQEAAQKRLRLSRELRQAVNQGQFEAHFQPIVELASGRIQKAEALLRWHHPER 468 Query: 307 GEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESF 366 G + P FI AE +I + +F R A ++ +N++P SE Sbjct: 469 GLVGPAEFIPLAEDTGLIEGVGDWVFREAVRRARVWRDRFGTDIQVSVNMSPLQFRSEGA 528 Query: 367 KADIQKL--LTSLPAHHFQIVLEITERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTGHS 423 + L L + QIV+EITE +L E T+ G++IAIDDFGTG+ Sbjct: 529 ERVESWLYHLEEMGVRGEQIVIEITENLLLHAHDEVTRQLFRFRDAGIQIAIDDFGTGYC 588 Query: 424 ALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARW 483 L YL++F +DYLKIDR F+ + + + A++ +A L + +AEGVET Q R Sbjct: 589 TLSYLKQFPIDYLKIDRSFVRNLENDPNDVALSKAIIVMAHELGLKVIAEGVETEGQRRL 648 Query: 484 LSERGVNFMQGYWISRPLPLDDF 506 LS+ G +F QGY +R LP +DF Sbjct: 649 LSDAGCDFAQGYLFARALPAEDF 671 >UniRef50_A3J7L9 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Marinobacter sp. ELB17 RepID=A3J7L9_9ALTE Length = 564 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 87/232 (37%), Positives = 136/232 (58%), Gaps = 7/232 (3%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 A+ ++QF + YQP +D + RV GLE LLRW HP G I PD FI AE +I+P+ Sbjct: 321 ALGQKQFRLYYQPQIDIVSGRVLGLEALLRWHHPTQGMIAPDRFIPLAEKTGLIIPIG-- 378 Query: 331 LFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITE 390 E + R+A + G+K +N++ H + A I+++L + LEITE Sbjct: 379 --EWVLREACS-QVATQHGLKVAVNLSARQFHQKDLVAMIRRILDETGMPPVNLELEITE 435 Query: 391 RDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTE 449 ++ + E A L+ +GV +++DDFGTG+S+L YL+RF +D LKID+ FI+ + T+ Sbjct: 436 SALIYDVELAIATMEQLNDLGVSVSLDDFGTGYSSLSYLKRFPIDMLKIDKSFIDEVTTD 495 Query: 450 TITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPL 501 ++ ++ ++ +A L + +AEGVET +Q L E G + QGY I+RPL Sbjct: 496 PDSNVIVKTIIVMAHSLGLKVIAEGVET-KQLTMLREHGCDQAQGYLIARPL 546 >UniRef50_C5RNC8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Clostridium cellulovorans 743B RepID=C5RNC8_CLOCL Length = 584 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 86/248 (34%), Positives = 145/248 (58%), Gaps = 3/248 (1%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 ++MTAI++ QF++ YQP V ++ G+E L+RW HP G I P FI E +I Sbjct: 336 DLMTAIEKGQFFLVYQPQVSLNTGKMVGVEALIRWSHPKLGLISPFEFIPIVEESGLIDS 395 Query: 327 LTQHLFELIARDAAE-LEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIV 385 + + + A E +K LP K +NI+ L + I+ +L L + Sbjct: 396 IGEWVIRTSCIQAKEWRDKKLPF-FKVAVNISSIQLKKMNICKIIKDILKELSLDPNVLE 454 Query: 386 LEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFIN 444 +E+TE M+++ E A + F L+++G++IAIDDFGTG+S+L YL +F++D LKIDR F+ Sbjct: 455 VELTESAMMEDIELAIENFRELNNMGIKIAIDDFGTGYSSLNYLRKFSIDKLKIDRSFVT 514 Query: 445 AIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLD 504 +G + ++ + ++ +AK L+ +AEGVET E ++L E G + +QGY+ S+P+ + Sbjct: 515 ELGDDFESTIITKTIIDMAKNLSFKVIAEGVETKEHLKYLMENGCDEVQGYYFSKPITAE 574 Query: 505 DFVRWLKK 512 + ++ K Sbjct: 575 EVEEFVYK 582 >UniRef50_B1HWB0 Signaling protein n=2 Tax=Bacillaceae RepID=B1HWB0_LYSSC Length = 701 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 84/243 (34%), Positives = 141/243 (58%), Gaps = 4/243 (1%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+ +++ A+ +FY+ YQP V+ ++ + +E L+RWRHP G + P+ FI AE Sbjct: 430 RILLEQDLHNALANNEFYLDYQPQVNLKSGAIESVEALVRWRHPSRGFVSPELFIPIAEE 489 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLL--TSLP 378 +I+PL + + E + A + E+ +K +N++ L + + +L + L Sbjct: 490 CGLIIPLGKWILETACQQAKQWEEQGLPPIKVAVNLSLGQLFQQDLVEMVAGILQRSKLD 549 Query: 379 AHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKI 438 AH+ Q LEITE + + TQL L ++G++IA+DDFGTG+S+L YL+ F +D LKI Sbjct: 550 AHYLQ--LEITESMTMNIDQMTQLLHELKALGIQIAVDDFGTGYSSLSYLKDFPIDCLKI 607 Query: 439 DRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWIS 498 DR FI + ++ ++++AK L + VAEG+E EQ +L E G +++QGY S Sbjct: 608 DRTFIRNVPHNPNDEALVSMIISMAKHLRLKVVAEGIEEVEQLSFLMEGGCDYIQGYLFS 667 Query: 499 RPL 501 +P+ Sbjct: 668 KPI 670 >UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 Tax=Colwellia psychrerythraea 34H RepID=Q47X88_COLP3 Length = 1086 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 89/272 (32%), Positives = 149/272 (54%), Gaps = 21/272 (7%) Query: 253 LCYYLMSVR------MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVA 306 CY+ S++ + ++ AI Q V YQP+V+ Q + E LLRW+HPV Sbjct: 805 FCYFTASMQEEALDHLELINDLRKAISLNQLEVFYQPIVELQTGVIRKAEALLRWKHPVR 864 Query: 307 GEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAP-------D 359 G + P FI AE +I+ + +F+ + + L + ++ +N +P D Sbjct: 865 GMVSPAEFIPLAEESGLIIEIGDWVFKQTVQHINTCKDQLGLDIQISVNKSPVQFRESID 924 Query: 360 HLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDF 418 L ++ A+ Q LP + IV+EITE ++ +T + + S G+ +++DDF Sbjct: 925 QLDWLAYLAENQ-----LPGEN--IVIEITEGLLMNNNTSTMERLSKFRSAGIGLSMDDF 977 Query: 419 GTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETP 478 GTG+S+L YL++F LDYLKID+ F I + + +A++T+A++L + +AEG+ET Sbjct: 978 GTGYSSLSYLKKFALDYLKIDQSFTRNIAPGSEDMILSEAIITMAQKLGLKVIAEGIETK 1037 Query: 479 EQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 EQ L G ++ QGY+ SRP+P +DF++ L Sbjct: 1038 EQMELLIGAGCDYGQGYYFSRPIPAEDFLQLL 1069 >UniRef50_P74101 Uncharacterized protein sll1895 n=1 Tax=Synechocystis sp. PCC 6803 RepID=Y1895_SYNY3 Length = 696 Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 86/257 (33%), Positives = 141/257 (54%), Gaps = 11/257 (4%) Query: 254 CYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAG 307 C+Y S+ R++ + A++R++F + YQP++D Q+ R+ G+E L+RW+HP+ G Sbjct: 422 CFYEESMNSDHLERIQLEHALHQALERDEFLLYYQPIIDVQSGRLCGVEALIRWQHPIHG 481 Query: 308 EIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFK 367 + P FI E+ +I+P+ + + + + + IN++P + Sbjct: 482 LVSPGLFIGLLETTGLIIPVGEWIMRTAFQHFHHWAPAVDDDFRIAINLSPQQFQAPDLL 541 Query: 368 ADIQKLL--TSLPAHHFQIVLEITERDMLKEQEATQ-LFAWLHSVGVEIAIDDFGTGHSA 424 I ++L +SLP H ++ EITE +++ ATQ L L S G+ +++DDFGTG+S+ Sbjct: 542 PTILRILAESSLPPHRLEV--EITENIVMQNVTATQNLLNALQSHGIRLSMDDFGTGYSS 599 Query: 425 LIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWL 484 L YL+ F + LKIDR F I + ++ A+L L N+ +AEG+E QAR L Sbjct: 600 LSYLKTFPFNTLKIDRSFTKDILHTPKDAAIIQAMLLLGNGFNLNIIAEGIEEEPQARCL 659 Query: 485 SERGVNFMQGYWISRPL 501 + G MQGYW S PL Sbjct: 660 YDLGCREMQGYWFSHPL 676 >UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQI6_9GAMM Length = 955 Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 94/249 (37%), Positives = 144/249 (57%), Gaps = 13/249 (5%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 A+++ QF+V YQP + + + G+E L+RW+HP G IPPD+FI AE+ +I + Sbjct: 709 ALEQSQFFVTYQPQLRIKDYSMVGVEALVRWQHPERGLIPPDSFIPIAENSGLI----RE 764 Query: 331 LFELIARDAAELE-KVLPVGVKFG---INIAPDHLHSESFKADIQKLL--TSLPAHHFQI 384 L I R A E + L V FG +N++ LH ESF + L T PA ++ Sbjct: 765 LGAWILRTACEQGVQWLNEQVNFGRIYVNVSATQLHDESFTEAVIMCLKETGFPAE--KL 822 Query: 385 VLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFI 443 LE+TE ++K+ Q A + + +G+E+AIDDFGTG+S+L YL++ +D LKID+ FI Sbjct: 823 GLEVTESFIMKDPQHAINVLSSFKEIGIELAIDDFGTGYSSLSYLKQLPIDKLKIDQSFI 882 Query: 444 NAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPL 503 I + + +AV+ + K LN+ +AEGVE+ QA +L ++ +QGY + PL Sbjct: 883 RDIPDDPNDMAIAEAVIAMGKALNLEVIAEGVESQIQADFLLDKECTEVQGYLYAHPLTA 942 Query: 504 DDFVRWLKK 512 D F W K+ Sbjct: 943 DAFSEWEKQ 951 >UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47UD6_COLP3 Length = 921 Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 87/262 (33%), Positives = 143/262 (54%), Gaps = 17/262 (6%) Query: 258 MSVRMRPGREIMT----AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDA 313 M+ R++ +E++T ++ +E F + YQP+ + G E L+RW HP G IPPD Sbjct: 644 MNARLQRNKEVLTDLAESLTKEHFELYYQPLFTIDQNILVGAEALIRWHHPEKGMIPPDQ 703 Query: 314 FINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGV---KFGINIAPDHLHSESFKADI 370 FI AE +I L + +A+ E++ L G+ K INI+P + + Sbjct: 704 FIAVAEKSGLINELGDWV---LAQACREIKNFLNAGITVFKVAINISPVQFRRKDL---L 757 Query: 371 QKLLTSLPAHHFQ---IVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALI 426 Q +L L H I LEITE ++ +A + LH G ++A+DDFGTG+S+L Sbjct: 758 QHMLMILAQHDVSAELIELEITEGAVMDNVDQAIETMQALHDAGFQLAMDDFGTGYSSLS 817 Query: 427 YLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSE 486 YL+RF + +KIDR FI+ + + + + A++ ++ L + +AEGVET EQ +L Sbjct: 818 YLKRFPIQKVKIDRSFISDLENDDDSKSITTAIIQMSHSLGLHVLAEGVETEEQLHYLQA 877 Query: 487 RGVNFMQGYWISRPLPLDDFVR 508 +++QGY+ RP+P +F++ Sbjct: 878 EKCDYVQGYYTGRPIPASEFIK 899 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 86/250 (34%), Positives = 139/250 (55%), Gaps = 3/250 (1%) Query: 265 GREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMI 324 G + A+ R Q ++ YQP + TQ V G E LLRW+HP G I P FI AE I Sbjct: 898 GNALRHALTRGQLHLHYQPQISTQDGHVVGAEALLRWQHPELGSISPAEFIPIAEDNGQI 957 Query: 325 VPLTQHLFELIARDAAE-LEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQ 383 +P+ + + + + ++ LP + +N++ + + +L H Sbjct: 958 IPIGEWVLRTAIKQLKDWMDSGLPPMI-MAVNLSAAQFRQSNLMELVTSILDESKVPHRY 1016 Query: 384 IVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGF 442 + LE+TE + + Q A + LH+ G++++IDDFGTG+S+L YL+RF + LKID+ F Sbjct: 1017 LELELTEAVAMDDPQLAIGVMDKLHTGGIKMSIDDFGTGYSSLSYLKRFKVYKLKIDQSF 1076 Query: 443 INAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 ++ I + ++ A++ +A L M T+AEGVET Q +L +G N +QGY+ S+PLP Sbjct: 1077 VHDITDDPDDKAIVAAIINMASSLGMQTIAEGVETAGQLSFLRLQGCNEVQGYYFSKPLP 1136 Query: 503 LDDFVRWLKK 512 + FV +L+K Sbjct: 1137 AEQFVSYLQK 1146 >UniRef50_C3KBD8 Putative sensory box GGDEF/EAL domain protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KBD8_PSEFS Length = 409 Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 88/236 (37%), Positives = 135/236 (57%), Gaps = 3/236 (1%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 A++ +F + YQP V+ + R+ LE LLRW P G + P F+ ES +IVP+ + Sbjct: 162 AVEHHEFTLHYQPKVEVASGRLCALEALLRWERPDYGAVSPAVFVPILESLGLIVPVGRW 221 Query: 331 LFELIARDAAELEKVLPVG-VKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEIT 389 + E + R AE ++ P+G V+ +N++ L ADI +LL + +E+T Sbjct: 222 VIEQVCRQIAEWQQG-PIGPVEVSVNVSGHQLIEGDLIADIARLLKQNQVEPHWLEVELT 280 Query: 390 ERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGT 448 E +++ Q LH++GV+I+IDDFGTG+S+L YL RF +D LKID FI + + Sbjct: 281 EGSLMENTQHTIASLQRLHTMGVKISIDDFGTGYSSLAYLRRFPIDTLKIDIAFIREVTS 340 Query: 449 ETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLD 504 + + ++ LA LN+ VAEGVET Q +L E G + +QGY SRPLP++ Sbjct: 341 NPQDAAITRTIIELAHSLNLRVVAEGVETQAQLAFLKEAGCDQIQGYLFSRPLPVE 396 >UniRef50_B6J3R5 Sensory box/GGDEF family protein n=5 Tax=Coxiella burnetii RepID=B6J3R5_COXB2 Length = 577 Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 84/243 (34%), Positives = 134/243 (55%), Gaps = 2/243 (0%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 A++ QFY+ YQP + ++ G+E LLRW+HP GEI P+ FI AE +I+P+ + Sbjct: 331 ALEENQFYLVYQPQYELSTQKIRGMETLLRWKHPELGEISPEDFIPIAEKAGIIIPIGEW 390 Query: 331 LFELIARDAAELEKVLPVG-VKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEIT 389 + + + + +PVG +K IN++P + F + +L I LEIT Sbjct: 391 VLRHACQQYKQWQSKIPVGEIKLSINVSPPQSIRKKFANSVAHILKETNTPPNVIELEIT 450 Query: 390 ERD-MLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGT 448 E M K A ++ L +G+ IAIDDFGTGHS+L YL+ +D +KID+ F+ + Sbjct: 451 ENSLMTKLNSAKKVLEELREIGLNIAIDDFGTGHSSLAYLKILPIDTVKIDKAFVKGLPD 510 Query: 449 ETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVR 508 + + ++ V+ LA+ LN+ T+ EGVE EQ +L + G +QG + S+ + D + Sbjct: 511 DQHDTAIVKFVIDLARSLNLTTIVEGVEKKEQMEFLLKLGGPLVQGNYFSKAIEADLMFK 570 Query: 509 WLK 511 LK Sbjct: 571 LLK 573 >UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSM4_THISH Length = 648 Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 89/246 (36%), Positives = 136/246 (55%), Gaps = 1/246 (0%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 +++ A+ RE+F V YQP VD + +V G E L+RWRHP G PP FI AE +I Sbjct: 401 QLVKALAREEFEVHYQPQVDVISGQVVGAEALVRWRHPEKGLQPPANFIAIAEETGIIEG 460 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 L + + + +D +L + + IN++ + + S I L Sbjct: 461 LGAWVLQKVCQDIRQLTRDGYRIPRISINLSARQFRQSDLVEQCRNTIRSAGIAPAYIEL 520 Query: 387 EITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 E+TE ++K+ + A + L+++GV +AIDDFGTG+S+L L+ F +D LKID+ F+ Sbjct: 521 ELTESTIMKDIDIAVGMLRQLNALGVRLAIDDFGTGYSSLNNLKHFPIDTLKIDKSFVRD 580 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 I + ++ A++ LAK L + VAEGVET EQ +L G +QGY+ SRPLP + Sbjct: 581 IPGDRDDEAIVTAIVALAKSLELEVVAEGVETREQLGFLKRLGCEIVQGYFFSRPLPFEG 640 Query: 506 FVRWLK 511 F +LK Sbjct: 641 FREYLK 646 >UniRef50_D0I998 Regulatory component of sensory transduction system n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I998_VIBHO Length = 583 Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 83/251 (33%), Positives = 137/251 (54%), Gaps = 1/251 (0%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+R ++ A+ R +F + YQP+ D + +TG E LLRW + G + P FI AE Sbjct: 313 RLRLEYHLVRALSRCEFSLVYQPLYDLKNNSITGAEALLRWNNDELGAVAPAEFIPIAEQ 372 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +I + + + + D + L + +NI+P + F D+ +L Sbjct: 373 SNLIYEIGKFVLDKAMEDFSSLNDPSGNPLHLAVNISPQQIRQPHFIDDLTGILEKHGFE 432 Query: 381 HFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 ++ LE+TE +L Q ++ LH++G E ++DDFGTG+S+L YL +F D LKID Sbjct: 433 ASRLELEVTENLLLSNQPNVKKMIKKLHNLGTEFSMDDFGTGYSSLSYLLQFPFDALKID 492 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 R F++ I + + AV+++A+ L + TVAEGVET EQ L +G + QGY++SR Sbjct: 493 RTFVDGITDVEMKEALATAVISMAQGLQIKTVAEGVETEEQLEMLKSKGCDLAQGYYLSR 552 Query: 500 PLPLDDFVRWL 510 P+ +++ + L Sbjct: 553 PVDIENLRKLL 563 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 84/246 (34%), Positives = 134/246 (54%), Gaps = 1/246 (0%) Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A+ +F + YQP ++ + R+ GLE L+RWRHP G +PP FI AE +I + Sbjct: 712 LHQALSNGEFRLYYQPQIEVCSRRLIGLEALIRWRHPEVGWVPPLRFIPLAEETGIIHRI 771 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + + E R E + V +N++P L + F ++ LL+ + LE Sbjct: 772 GRWVLEEACRQQREWQAAGLCIVPVAVNLSPLQLQKDDFPEQVEALLSGCRLAPGLLELE 831 Query: 388 ITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE ++++ + + L G +IDDFGTG+S+L YL RF +D LKID+ FI + Sbjct: 832 LTETAVMRDVGRMSDMLRKLKERGTRFSIDDFGTGYSSLGYLNRFPVDKLKIDQSFIRDV 891 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 + + A++ LAK+L++ VAEGVET EQ +L G + QG++ SRP+P D+ Sbjct: 892 TRREDHAAITRAIIALAKQLHLKVVAEGVETAEQLEFLERAGCDGAQGFYFSRPVPADEI 951 Query: 507 VRWLKK 512 WL + Sbjct: 952 AGWLSR 957 >UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q47ES6_DECAR Length = 832 Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 90/247 (36%), Positives = 139/247 (56%), Gaps = 3/247 (1%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 E+ AI +QF++ +Q +D Q+ R TG E LLRW HP G IPP +FI AE +IVP Sbjct: 572 ELRKAIDEQQFHLCFQVQMD-QSGRPTGGEALLRWEHPTRGTIPPASFIPLAEETGLIVP 630 Query: 327 LTQHLFELIARD-AAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIV 385 + Q + R AA ++ G+ +N++ F ++ LL A ++ Sbjct: 631 IGQWVLATACRQLAAWSQQPETSGLTLAVNVSARQFRQARFTDQLRDLLLQTGAPATRLK 690 Query: 386 LEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFIN 444 LE+TE ML++ EA A L +G+ ++DDFGTG+S+L YL+R L+ LKID+ F+ Sbjct: 691 LELTESMMLEDTEAIIGRMAELKQLGIRFSLDDFGTGYSSLAYLKRLPLNQLKIDQSFVR 750 Query: 445 AIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLD 504 + T+ + + + ++ L L + +AEGVET Q R+L+ G QGY RPLPL Sbjct: 751 DVLTDPNDAAIAETIVALGNILGLEVIAEGVETDAQWRFLANVGCKNYQGYLFGRPLPLL 810 Query: 505 DFVRWLK 511 +F ++L+ Sbjct: 811 EFEQFLQ 817 >UniRef50_A5EP96 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=3 Tax=Bradyrhizobium RepID=A5EP96_BRASB Length = 913 Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 85/243 (34%), Positives = 134/243 (55%), Gaps = 2/243 (0%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 E+ A++R +F + YQP VD + RV G E L+RWRHP G +PP FI + + Sbjct: 657 ELALAVERREFELFYQPQVDLSSGRVIGAEALIRWRHPTRGLVPPGDFIPVVNTSPLSEA 716 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 + + R A E + + ++ GIN++P S A + KLLT I L Sbjct: 717 VATWVMATACRQAREWQ-LAGHEIRVGINLSPSQFQSGDLAAFVSKLLTVTGVSPGLIEL 775 Query: 387 EITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 E+TE +L ++ Q F L ++GV + DDFGTG+++L YL++F LD LKIDR F+ Sbjct: 776 EVTEDILLHDEPGVLQTFNRLQALGVSLVFDDFGTGYASLSYLKKFPLDGLKIDRSFVRD 835 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 + T+ + ++ + ++L+++LN+ +AEG+E A +L G QGY +P+P D Sbjct: 836 VLTQADDAAIVGSTVSLSRQLNLSVIAEGIENQATADFLLALGCEHGQGYHFGKPMPAAD 895 Query: 506 FVR 508 F R Sbjct: 896 FER 898 >UniRef50_B9YZY8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YZY8_9NEIS Length = 718 Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 99/282 (35%), Positives = 153/282 (54%), Gaps = 31/282 (10%) Query: 253 LCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVA 306 CY++ S+ R++ G ++ +A+ + Q V YQP+VD + E L+RW HP Sbjct: 443 FCYFVPSIQAIFAERLQLGHDLRSAMAQGQLDVYYQPIVDLATGHIVKAEALVRWHHPRR 502 Query: 307 GEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVL--------PVG--VKFGINI 356 G I P FI AE +I + +F R AA + K L P G ++ IN Sbjct: 503 GWISPAQFIPIAEDIGLINGIGDWVF----RRAAGMAKRLWESGCSGTPAGAPLQISINK 558 Query: 357 AP-----DHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQ-EATQLFAWLHSVG 410 +P H H E++ +Q++ LPA I +EITE +L E+ + T G Sbjct: 559 SPRQFFTGHAH-ETWIDHLQEI--GLPAEC--IAIEITEGLLLDERPDVTSKLQQFRRAG 613 Query: 411 VEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLT 470 V++++DDFGTG+SA+ YL+R +DYLKID+ F+ + + + +A++ ++ +L + Sbjct: 614 VQVSLDDFGTGYSAMAYLKRLDIDYLKIDQSFVRDMTSTPSDRAITEAIIAMSHKLGLRV 673 Query: 471 VAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 VAEGVET EQ LS G +F QGYW SR LP D+F + L++ Sbjct: 674 VAEGVETREQRDLLSAAGCDFGQGYWFSRALPEDEFFKLLQR 715 >UniRef50_D2SEK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SEK3_9ACTO Length = 893 Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 94/256 (36%), Positives = 137/256 (53%), Gaps = 2/256 (0%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R R R++ AI +A QP+V + RV GLE L+RWRHP G++PP+ F+ AE Sbjct: 627 RARLARDLPDAIVDGGLSLALQPIVGVEEGRVLGLEALVRWRHPELGDVPPEEFVGVAED 686 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 + ++VPL Q A A ++ G+N++ HL + AD+ + L + Sbjct: 687 EGLVVPL-QRWVLGAATAALAPLLAQGRDLELGVNVSVRHLQAGCLAADVARALAASGVP 745 Query: 381 HFQIVLEITERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 +++LEITE +++ E + A L G I+IDDFG GHS L L R +D LK+D Sbjct: 746 ASRLMLEITESVLVEAEDRVERELAALREAGCMISIDDFGKGHSTLARLSRLPVDVLKMD 805 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 R F+ I + T+ V+ +V+ L + L + VAEGVETP Q L G F+QGY + R Sbjct: 806 RDFVAHIEDDPRTAAVVASVVELGRTLGLDVVAEGVETPGQLSVLRGLGCRFLQGYLLGR 865 Query: 500 PLPLDDFVRWLKKPYT 515 P+P D L PY Sbjct: 866 PVPTADLPAVLAAPYA 881 >UniRef50_Q7NZT0 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZT0_CHRVO Length = 606 Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 84/239 (35%), Positives = 136/239 (56%), Gaps = 3/239 (1%) Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + +AI+RE+ + YQP+VD +RV G E+LLRW H GEIPP FI AES IV + Sbjct: 339 LRSAIEREELHARYQPIVDADGVRVVGAELLLRW-HAAGGEIPPAQFITIAESCGAIVAI 397 Query: 328 TQHLFELIARDAAELEKVLPVGVKF-GINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 +F A+ + + +N++ L + ++L A +I+L Sbjct: 398 GYWVFRQACLAEADWRRRWGADAPYVSVNLSARQLDEARLADEFGRILRETGAAPARILL 457 Query: 387 EITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 E+TE ++ + + ++ L+++G+ +A+DDFGTG+S+L L R ++ LKIDR F++ Sbjct: 458 EVTETALMADIDVNLKVLQALNALGLRVAVDDFGTGYSSLAQLTRLPVEVLKIDRAFVDG 517 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLD 504 IG + ++ A++ L K L + VAEGVE+ EQ + L + G + +QGY RP+PLD Sbjct: 518 IGRKQQDVTLIRAIIGLGKALGLKLVAEGVESGEQLQTLRQLGCDLIQGYLFHRPMPLD 576 >UniRef50_A4FDX2 PAS:GGDEF n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FDX2_SACEN Length = 914 Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 84/242 (34%), Positives = 139/242 (57%), Gaps = 5/242 (2%) Query: 266 REIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIV 325 +++ A++++Q +VAYQ VVD + R G+E LLRW HPV G + P FI AE +I Sbjct: 669 QDLRHAVQQDQLWVAYQRVVDLRDERTVGVEGLLRWTHPVHGTVSPGEFIPLAEQSDLIN 728 Query: 326 PLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLT--SLPAHHFQ 383 + H+ + R A + G++ N++P L + +++ LT LPAH Sbjct: 729 SIGAHMLRMATRQVAAERERGGEGLRLNANLSPRQLDDPYLQVLVKQALTDAGLPAH--A 786 Query: 384 IVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGF 442 + LE+TE ++ + A+ ++ + L +GV +AIDDFGTG+S+L L R LD LKIDR F Sbjct: 787 LCLEVTENAIMHDPAASARVLSSLRELGVRLAIDDFGTGYSSLAQLRRLPLDTLKIDRSF 846 Query: 443 INAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 + + + ++++++ +A + + VAEGVET Q L E G + QG+++ RP P Sbjct: 847 VTDLDSSEELRVMINSIVAMAHAVGLDVVAEGVETARQLDLLGEVGCDQAQGFYLGRPGP 906 Query: 503 LD 504 ++ Sbjct: 907 IE 908 >UniRef50_Q5NYX4 Complex sensory protein with histidine kinase domain n=2 Tax=Rhodocyclaceae RepID=Q5NYX4_AZOSE Length = 1246 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 89/259 (34%), Positives = 141/259 (54%), Gaps = 13/259 (5%) Query: 253 LCYYLMSVRMRPG------REIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVA 306 C+Y + +R + AI++++ ++AYQP VD V G E L RWRHP Sbjct: 837 FCFYETGLNVRTAPRLRLELALRRAIEQDELFLAYQPKVDLLTGEVVGSEALCRWRHPEL 896 Query: 307 GEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKF---GINIAPDHLHS 363 G + P FI AE +I+P+ + + E A+ + + G+ + +N++P Sbjct: 897 GLVSPGEFIPIAEESGLILPIGRWVLETAC---AQARRWIDDGIDYRRVAVNVSPLQFFR 953 Query: 364 ESFKADIQKLLTSLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGH 422 + AD+ LL+ ++LEITE ++ A + L ++GV++AIDDFGTG+ Sbjct: 954 DDLVADVAALLSRYRLEPASLMLEITESAIMGNPARAIVMMQQLKAIGVKLAIDDFGTGY 1013 Query: 423 SALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQAR 482 S+L L+RF +DYLKIDR F+ I T + + ++++LA LN+ +AEGVET Q Sbjct: 1014 SSLSALKRFPIDYLKIDRAFVTDITTNASDAAIAVSIISLAHSLNLRVIAEGVETEGQVL 1073 Query: 483 WLSERGVNFMQGYWISRPL 501 +L RG + MQGY S P+ Sbjct: 1074 YLRGRGCDEMQGYHFSPPV 1092 >UniRef50_Q486I4 Sensory box/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q486I4_COLP3 Length = 685 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 90/250 (36%), Positives = 143/250 (57%), Gaps = 9/250 (3%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 ++ T +K+ QF V YQ + + G E L+RW+H G IPP FI+ AES +I+P Sbjct: 440 DMRTGLKKGQFTVHYQAKQSLKTDELIGCEALIRWQHHTLGNIPPLEFISLAESSGLIIP 499 Query: 327 LTQHLFE----LIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHF 382 + + + E I + A +K L V V N++ L FK ++ +++ S Sbjct: 500 IGKFVLEQSCLFIKQWQAHSDKSLVVSV----NVSALQLKDPLFKEEVLQVINSAGISGH 555 Query: 383 QIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRG 441 I LE+TE +++ EAT Q L +GV I+IDDFGTG+S+L YL++ +D LKID+ Sbjct: 556 NIELELTESLLMENIEATIQTLHDLKEIGVSISIDDFGTGYSSLSYLQKLPVDTLKIDKS 615 Query: 442 FINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPL 501 FI+++ + + ++ ++LA L + TVAEGVET EQ L++ G + +QGY S+P+ Sbjct: 616 FIDSLSSSDEDTWIVINTISLASGLKLKTVAEGVETQEQKSILADLGCDILQGYLYSKPI 675 Query: 502 PLDDFVRWLK 511 P ++F K Sbjct: 676 PKNEFFMKFK 685 >UniRef50_B8EE65 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=6 Tax=Gammaproteobacteria RepID=B8EE65_SHEB2 Length = 744 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 82/242 (33%), Positives = 134/242 (55%), Gaps = 1/242 (0%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 +I ++A QP V + V G+E L RW P +PP FI AE+ +I L + Sbjct: 496 SITCNDIHIALQPQVCIKTGEVVGVEALARWTLPNGQNVPPLDFIPIAEATGLITQLGEQ 555 Query: 331 LFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITE 390 LF + L + + G+N++ E+ +++ + QI +E+TE Sbjct: 556 LFVQSCQALCALNEAGYTNLCMGVNLSAMQFEQENIVDILKQHIADAKVPPKQIEIEVTE 615 Query: 391 RDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTE 449 ++ E + L S G+ IAIDDFGTG S+L YL + T D +KID+ FI+ + ++ Sbjct: 616 SIAMQNFEIIRKQLNELRSKGIRIAIDDFGTGFSSLAYLSKLTFDRIKIDKSFIDNVTSD 675 Query: 450 TITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRW 509 + ++D+++ L +R +M +AEGVET EQA+WLS+RG + QGY+ ++P+PL + + W Sbjct: 676 DGAAAIVDSIILLGQRFHMNVIAEGVETKEQAKWLSDRGCHDAQGYFYAKPMPLPELLTW 735 Query: 510 LK 511 LK Sbjct: 736 LK 737 >UniRef50_Q1QVL7 Diguanylate cyclase/phosphodiesterase with GAF sensor n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QVL7_CHRSD Length = 693 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 92/252 (36%), Positives = 149/252 (59%), Gaps = 7/252 (2%) Query: 263 RPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQK 322 R RE+ TA+ +Q + Q DT R+ G EVLLRW+HP G + P +FI AE Sbjct: 445 RLERELRTALDAQQLRLYLQGQFDTSG-RLAGAEVLLRWQHPREGLLAPGSFIAEAEHSG 503 Query: 323 MIVPLTQHLFELIARDAAELEKVL-PVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHH 381 +I P+ Q + E + A L VL + +N++ LH ++F + LL Sbjct: 504 LIRPMGQWVLE---QACALLGGVLRDSDLTLSVNVSVQQLHDDAFITTLTHLLDRHGFAP 560 Query: 382 FQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRG 441 +++LE+ E ++ A++L A L ++G+ +A+DDFGTG+S+L YL+ F +D +KID+ Sbjct: 561 HRLILEVVESLLVTPGVASRLNA-LRALGIRLALDDFGTGYSSLRYLQDFQVDEIKIDKI 619 Query: 442 FINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPL 501 F++AI E +P++ +++ L K L + VAEG+E+ Q +L GV+F+QGY+++RP Sbjct: 620 FVDAI-KERQDAPLVRSIIALGKALELRVVAEGIESAFQQDYLVTNGVDFLQGYYLARPE 678 Query: 502 PLDDFVRWLKKP 513 P+D F+R L P Sbjct: 679 PVDAFLRRLDAP 690 >UniRef50_B4RW56 Sensory box/GGDEF family protein n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4RW56_ALTMD Length = 456 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 88/239 (36%), Positives = 132/239 (55%), Gaps = 6/239 (2%) Query: 270 TAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQ 329 +A++ + FY+AYQ VD + + G E LLRW V G + P FI AE I ++ Sbjct: 211 SALENDAFYLAYQAKVDAEQ-NIIGFETLLRWHDDVLGHVSPAEFIPIAEQTDKISLISM 269 Query: 330 HLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLL--TSLPAHHFQIVLE 387 + + + +A L K + IN++P L+SE I K + LPA + +I E Sbjct: 270 WIIKRLEIEAPRLIKSFGSQIIISINLSPQDLNSEKLTQFILKGMRENKLPAKNLEI--E 327 Query: 388 ITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 ITE + A F + G ++A+DDFGTG+S+L YL +F +D LKIDR F+N I Sbjct: 328 ITETAYMNNFNVANSFFESIKHYGCQLALDDFGTGYSSLSYLTKFDIDTLKIDRSFVNNI 387 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 G + + ++ +AK LN AEGVET EQA +L + G + +QG+ S+P+PL+D Sbjct: 388 GISEQSELITKTIIKMAKSLNFSVCAEGVETREQATFLLQNGCHALQGFLYSKPIPLED 446 >UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5X9_9PROT Length = 927 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 87/253 (34%), Positives = 136/253 (53%), Gaps = 4/253 (1%) Query: 260 VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAE 319 RM ++ A+ QF V YQP+V+ + ++ E L+RW+HPV G + P FI AE Sbjct: 673 ARMHLANDLRIAVAAGQFRVYYQPIVEMSSGQIYKAEALIRWQHPVRGMVSPAEFIPLAE 732 Query: 320 SQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHL-HSESFKADIQKLLTSLP 378 +IVP+ + +F + + + + +N +P H+ES + L Sbjct: 733 ETGLIVPIGEWVFRQAVQQVVQWRRKFHRSFQISVNKSPVQFRHAESLS--WPEYLEQQH 790 Query: 379 AHHFQIVLEITERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLK 437 I++EITE +L E E + G+++AIDDFGTG+S+L YL+ F +DYLK Sbjct: 791 VSGDSIIVEITEGLLLDAEVEVNKKLLRFRDAGIQVAIDDFGTGYSSLSYLKEFDIDYLK 850 Query: 438 IDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWI 497 ID+ F+ +G T + +A++ +A +L +AEGVET Q L+ G ++ QGY Sbjct: 851 IDQSFVRNLGPGTSDLALCEAIIVMAHKLGFKVIAEGVETSTQHELLAAAGCDYGQGYLY 910 Query: 498 SRPLPLDDFVRWL 510 SRPLP ++F R L Sbjct: 911 SRPLPPEEFERQL 923 >UniRef50_A3JIW6 Two-component response regulator n=3 Tax=Marinobacter sp. ELB17 RepID=A3JIW6_9ALTE Length = 848 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 88/248 (35%), Positives = 137/248 (55%), Gaps = 5/248 (2%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 E+M AI+ QF V YQP+V+ + R+ E L+RW HP G + P AFI+ AE IV Sbjct: 602 ELMEAIEARQFVVYYQPLVEAKTGRLRSAEALVRWNHPARGLLLPGAFISLAEQTGQIVA 661 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLL--TSLPAHHFQI 384 + + + D A+ + V +NI+P F D+ +L + LP + Sbjct: 662 IGRWVLHQACMDMAQRWRQTGQAVSIAVNISPLQFRRPEFIDDVLAVLEASGLPPELLE- 720 Query: 385 VLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFI 443 LE+TE +L +A + L +GV++AIDDFGTG S+L YL + + +K+DR FI Sbjct: 721 -LEVTEGVLLSGIDKAISMLESLRDLGVQVAIDDFGTGFSSLSYLRQLPITKVKLDRSFI 779 Query: 444 NAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPL 503 + T+ ++ ++ V+T+A L +L VAEG+ET EQ +L+ + +QG+ SRP+PL Sbjct: 780 IDVTTDRGSAAIVQGVITMAHHLGLLVVAEGIETVEQQNYLAASDCDLLQGFLYSRPVPL 839 Query: 504 DDFVRWLK 511 F L+ Sbjct: 840 GQFALGLE 847 >UniRef50_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodiesterase (EAL), with GAF and two PAS/PAC sensor domains n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CCD7_METED Length = 1028 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 98/278 (35%), Positives = 142/278 (51%), Gaps = 19/278 (6%) Query: 238 YAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEV 297 Y F GM V RM+ E+ AI F + YQPV+ R+ G E Sbjct: 742 YCFYEAGMDAAV---------EARMQLEFEMREAITCGSFALHYQPVLRLADHRIVGFEA 792 Query: 298 LLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIA 357 L+RW HP G I PD FI AE +IVPL + R+AA P ++ +N++ Sbjct: 793 LMRWPHPKRGMIAPDEFIPSAEETGLIVPLGSWALQEACREAAS----WPDHLRIAVNVS 848 Query: 358 PDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLH---SVGVEIA 414 + + L + ++VLE+TE ++++ EA + A LH S+GV IA Sbjct: 849 AVQFQQPGLEQGVMSALAASGLAPHRLVLEVTESVLVQDAEA--VIACLHRLKSLGVRIA 906 Query: 415 IDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEG 474 +DDFGTG+S+L YL RF D +KIDR FI+ IG + + ++ AV+ +A +L AEG Sbjct: 907 LDDFGTGYSSLSYLRRFPFDRIKIDRSFISEIG-DPGAAAIVRAVVGIAMQLGATVTAEG 965 Query: 475 VETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 VET Q + G +QGY +SRPLP D + ++ Sbjct: 966 VETTAQLEQVRSEGCMEVQGYLVSRPLPADRAIEFISS 1003 >UniRef50_C9Y997 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y997_9BURK Length = 774 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 87/240 (36%), Positives = 135/240 (56%), Gaps = 9/240 (3%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 A+ +++ + +QP VD + ++ G E L+RWRHPV G I P FI AE MI L Sbjct: 526 ALHQQELQLYWQPKVDLKTWKIVGAETLMRWRHPVLGWISPGEFIPIAEQSGMIAALGS- 584 Query: 331 LFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITE 390 + L+ +A + G+K +N++ L +SF + +Q + + Q+ LE+TE Sbjct: 585 -WALL--EACRMHSSALAGLKVSVNVSSMQLRDDSFLSVLQDAMDEFQVNPGQLELELTE 641 Query: 391 RDMLKEQEATQLFAWLHSV---GVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 L + A A LH++ GV++A+DDFGTG+S+L YL F D LKIDR F+ + Sbjct: 642 SVFL--ESADHALAMLHAIKKTGVKLAMDDFGTGYSSLSYLRSFPFDTLKIDRAFVIELV 699 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + V+ + LA+ L M TV EGVETP+Q + G + +QGY +++P+PL +FV Sbjct: 700 EKKDAEAVVHMITGLAQTLGMRTVCEGVETPQQLEAIQRAGCDEVQGYIVAKPMPLQEFV 759 >UniRef50_Q89HX5 Bll5864 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89HX5_BRAJA Length = 799 Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 92/250 (36%), Positives = 131/250 (52%), Gaps = 9/250 (3%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 ++ A++R++F YQP+ D + RV E LLRW HP G I P FI AE +IV Sbjct: 550 DLRAALQRDEFQPYYQPIRDVASGRVVVFEALLRWNHPQRGLIAPINFIPLAEETGLIVQ 609 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLT--SLPAHHFQI 384 L + + DAA P V +N++P + + A + LT LPA + Sbjct: 610 LGEFVLRSACTDAA----TWPDDVDVAVNLSPVQFRNPNLIASVTAALTVSGLPARRLE- 664 Query: 385 VLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFI 443 LEITE +L+ EAT L ++GV I++DDFGTG+S+L YL F D +KIDR F+ Sbjct: 665 -LEITESVLLQNSEATLTTLHELRAMGVRISLDDFGTGYSSLSYLRSFPFDKIKIDRSFV 723 Query: 444 NAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPL 503 + + T + ++ AV L + L ++T AEGVE Q L G QGY S+P P Sbjct: 724 SELATREDSMAIIRAVTGLGRSLGIVTTAEGVENDAQLELLRREGCTQAQGYLFSKPRPA 783 Query: 504 DDFVRWLKKP 513 D L++P Sbjct: 784 SDVALMLERP 793 >UniRef50_A8ET73 EAL/GGDEF/PAS domain protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ET73_ARCB4 Length = 826 Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 84/250 (33%), Positives = 143/250 (57%), Gaps = 4/250 (1%) Query: 258 MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 +S R++ + + A++ E+FY+ YQP + + + +E LLRW++P+ G + PD FI Sbjct: 580 VSSRLKIEQALSKALENEEFYLVYQPKYNLKTKEIFSVETLLRWKNPILGNVSPDEFIYI 639 Query: 318 AESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSL 377 AE +I L +F+ D +L+ + + + IN++ L +F +I+K+L Sbjct: 640 AEEIGLIHELGFFVFKKACEDFVKLQNKINIQM-ITINVSTLQLVRSNFIDEIKKILIQT 698 Query: 378 PAHHFQIVLEITERDMLKEQEATQL-FAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYL 436 I +EITE ++ + T+ L ++G +I IDDFGTG+S+L YL++ +D + Sbjct: 699 NIDTINIGIEITETYFIENMKDTEKSLNELQNLGFKILIDDFGTGYSSLQYLQKLPIDII 758 Query: 437 KIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYW 496 KID+ F++++ ++ A++ L+K N TVAEG+ET EQ L E GV+F QGY Sbjct: 759 KIDKSFVSSLDDN--NDSIIRAIVALSKSFNYTTVAEGIETKEQEDKLIELGVDFGQGYL 816 Query: 497 ISRPLPLDDF 506 S+P L +F Sbjct: 817 FSKPKLLIEF 826 >UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium RepID=B0UQT2_METS4 Length = 797 Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 87/267 (32%), Positives = 142/267 (53%), Gaps = 13/267 (4%) Query: 258 MSVRMRPGR----EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDA 313 M+ RM+ R ++ A+ R++F + +QP VD + R G E L+RW HP G + P Sbjct: 536 MNARMQARRSLELDLRRALARQEFELYFQPQVDARTGRFDGAEALIRWHHPERGLVSPGE 595 Query: 314 FINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKL 373 FI AE +I PL + + +A LPV V N++P A ++ + Sbjct: 596 FIPLAEETGLIGPLGEWVLRTACAEARRWATPLPVAV----NLSPVQFRDPRLAATVRGI 651 Query: 374 L--TSLPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLER 430 L T LP +I EITE +++++ T + L +G+ I++DDFGTG+S+L YL R Sbjct: 652 LAETGLPGSRLEI--EITEGTLMQDEHRTLAVLTELRGLGIRISMDDFGTGYSSLSYLRR 709 Query: 431 FTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVN 490 F D +KID+ F+ + + ++ A+ L + L + T AEGVET +Q+ +++ G + Sbjct: 710 FPFDKIKIDQSFVRQTPQDRDSVAIVRAIAMLGRSLGIKTTAEGVETDQQSVFIAGEGCD 769 Query: 491 FMQGYWISRPLPLDDFVRWLKKPYTPQ 517 +QGY SRP+P + + P P+ Sbjct: 770 QLQGYLYSRPVPAESIAELFRAPRAPR 796 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 91/247 (36%), Positives = 145/247 (58%), Gaps = 10/247 (4%) Query: 271 AIKREQFYVAYQPVVDTQAL-RVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQ 329 A++R + + YQP +D RV G+E L+RW+HP G + P FI AES +I+P+ + Sbjct: 792 ALERNELVLHYQPQIDLVDFGRVAGVEALIRWQHPEFGLVSPAEFIPIAESTGLILPIGE 851 Query: 330 HLFE--LIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLT--SLPAHHFQIV 385 + + L+ A +L L +G + G+N++ ++ A + ++L LPA + Sbjct: 852 WVMQTALLQLKAWQLAG-LQLG-QVGVNLSAHQFRQQNLPATVARILAEAGLPASCLE-- 907 Query: 386 LEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFIN 444 LE+TE M+ + A + LH GV ++IDDFGTG+S+L YL+RF +D LKID+ F+ Sbjct: 908 LELTESAMMDDPVAAVAMMDALHRDGVRMSIDDFGTGYSSLNYLKRFRIDKLKIDQSFVR 967 Query: 445 AIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLD 504 + + +++A+++LA+ L T+AEGVE PEQ +L G +QGY SRPLP D Sbjct: 968 DLTQDPEGEAIVEAIVSLARTLRFRTIAEGVEKPEQLAFLRASGCQEVQGYLFSRPLPPD 1027 Query: 505 DFVRWLK 511 + WL+ Sbjct: 1028 ELAVWLR 1034 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 104/336 (30%), Positives = 155/336 (46%), Gaps = 23/336 (6%) Query: 181 DYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWT-----WND 235 D DG A + + RL+N+ R + + + +Y D T W Sbjct: 710 DTDGAAYL---------AERLLNIAARQYNIERHEINLTVSIGIAMYPTDGTDFDTLWRS 760 Query: 236 VWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIM------TAIKREQFYVAYQPVVDTQA 289 A SG C++ ++ R R + A++R QF + YQP + Sbjct: 761 ADAAMYRAKQSGR--NDYCFFTTEMQARSARTLQIDNALRRALERNQFSLVYQPQLSLNT 818 Query: 290 LRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVG 349 R+ G E L+RW HP G PPD FI AES I+P+ + + + R + Sbjct: 819 NRIVGFEALIRWTHPQFGNTPPDEFIPIAESNGQIIPIGEWVLKTAVRQLRLWQDNGLKD 878 Query: 350 VKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITER-DMLKEQEATQLFAWLHS 408 V +N++ + +L + LE+TE M A + L Sbjct: 879 VTISVNLSAVQFRHPRLPELVMAILEEAGVSPECLQLELTEGVAMENPLAAITVIDELRK 938 Query: 409 VGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNM 468 G+ I+IDDFGTG+S+L YL+RF + LKIDR F+ + +T ++ AV++LA L M Sbjct: 939 KGIRISIDDFGTGYSSLTYLKRFNVYSLKIDRSFVQDLPNDTEDMAIVSAVISLADSLGM 998 Query: 469 LTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLD 504 +TVAEGVET EQ +L RG +QGY++SRPL D Sbjct: 999 ITVAEGVETKEQLEFLRSRGCTEIQGYYLSRPLQAD 1034 >UniRef50_B0C4Z3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=2 Tax=Cyanobacteria RepID=B0C4Z3_ACAM1 Length = 754 Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 86/280 (30%), Positives = 153/280 (54%), Gaps = 13/280 (4%) Query: 250 VGLLCYYLMSVRMRPG--------REIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRW 301 +G C+ + S M R++ +A+ R++F + YQP++D Q+ +T +EVL+RW Sbjct: 451 LGKGCFVVFSPEMHAQTLSLLKLERDLRSAVDRQEFVLYYQPIIDLQSGDLTDVEVLVRW 510 Query: 302 RHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVG--VKFGINIAPD 359 +HP G + P FI AE +IV + Q + + + + ++ +KF +N++ + Sbjct: 511 QHPDRGLVMPSEFIPLAEETGLIVEIGQWVLQEACQTLRDYQQQFASATELKFSVNLSSE 570 Query: 360 HLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEA-TQLFAWLHSVGVEIAIDDF 418 L +F + ++L+ + LE+TE ++ +E + L + I++DDF Sbjct: 571 QLQDPNFIQTVDRVLSQSGLDGRYLKLELTESMLMSHEEKHIKTLQQLRDRSITISLDDF 630 Query: 419 GTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETP 478 GTG+S+L YL RF LD LKID+ F++ + +E + +++ +++LA+ LNM +AEG+ET Sbjct: 631 GTGYSSLSYLYRFPLDTLKIDQSFVSRMISEPKDAEIVNTIISLARTLNMDVIAEGIETE 690 Query: 479 EQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQW 518 E+ L + G QGYW S P+ + L+ PQW Sbjct: 691 EEVLHLKKLGCERGQGYWFSPPMSQEKLEEHLQA--GPQW 728 >UniRef50_Q30WY0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30WY0_DESDG Length = 566 Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 81/236 (34%), Positives = 135/236 (57%), Gaps = 4/236 (1%) Query: 271 AIKREQFYVAYQPVVD-TQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQ 329 +++ F++ +QP T + G E L+RW HP G + P F+ AE+ +I+ L + Sbjct: 319 SLRNGDFFLVFQPQYALTPQPELIGFETLVRWNHPERGIVSPAEFVPMAETTGLILHLDR 378 Query: 330 HLFELIARDAAELEKVLPV--GVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 ++ R E+ LP + F +N++ H+ +F ++K L + H I+LE Sbjct: 379 YVLREACRIWGEMRASLPACRALHFSVNLSASHMDRPTFIRKLEKTLAAFEMPHESIILE 438 Query: 388 ITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE ++ E A + +L S+G+ +A+DDFGTG+S+L YL RF LKID+ F++ I Sbjct: 439 LTESALMSNPETAARKMQYLRSIGLHVALDDFGTGYSSLAYLTRFPCYCLKIDKSFVDNI 498 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 T+ + V+ A++ LA L M+ +AEGVETPEQ L + G + +QGY + +P+P Sbjct: 499 TTDENSVRVVRAIIHLAHGLGMVALAEGVETPEQLAQLQDMGCDQVQGYLLGKPMP 554 >UniRef50_C9Y1D6 Uncharacterized protein yjcC n=4 Tax=Enterobacteriaceae RepID=C9Y1D6_CROTZ Length = 536 Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 96/293 (32%), Positives = 145/293 (49%), Gaps = 13/293 (4%) Query: 228 ADDWTWNDVWYAFL-----LGGMSGTVVGLLCYYLMSVRMR---PGREIMTAIKREQFYV 279 +D W W W + LG + G GLL + R R PGR++ A+++ + Sbjct: 230 SDAWFWQ-AWRRQMSVMLPLGLIMG---GLLVFLGSRTRNRFNSPGRQLQRALQKRALRL 285 Query: 280 AYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDA 339 YQP++D + G E LLRW + P FI AE MI +T ++ E + D Sbjct: 286 HYQPIMDIKHGMCVGAEALLRWPGYNGQVMSPAEFIPLAEKTGMIAQVTDYVVEELFNDL 345 Query: 340 AELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEA 399 P + IN++ HS A I+ + QI +E+TER + Sbjct: 346 GHFLATHP-QIYISINLSASDFHSSRLIALIEGKNSQHGVRAQQIKIEVTERGFIDVPRT 404 Query: 400 TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAV 459 T + G EIAIDDFGTG+S L L +D LKID+ FI+ + T + + + + + Sbjct: 405 TPVIQAFRQSGFEIAIDDFGTGYSNLHNLYSLNVDILKIDKSFIDTLTTNSTSHLIAEHI 464 Query: 460 LTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 + +A+ L + +AEGVET EQ WL +RGV + QG+ S+ LP +FV WL++ Sbjct: 465 IDMAQSLRLKIIAEGVETAEQVGWLLKRGVQYCQGWHFSKALPRQEFVAWLQQ 517 >UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Proteobacteria RepID=A8H6Y6_SHEPA Length = 1064 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 89/260 (34%), Positives = 143/260 (55%), Gaps = 4/260 (1%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 RMR +++ +AI +F + YQP+V Q E L+RWRHP G + P FI AE Sbjct: 753 RMRLIQDLRSAIADHEFELYYQPIVSLQGGLGLKAEALIRWRHPKRGLVSPIEFIAVAEE 812 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADI-QKLLTSLPA 379 +I+ + +F+ AR +A + V+ IN +P E + LL +L Sbjct: 813 TGLIIEIGNWVFQQAARQSALWRDRFGIEVQISINKSPVQFRDEGESINSWVNLLKTLNL 872 Query: 380 HHFQIVLEITERDMLKEQEA--TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLK 437 + I +EITE +L A ++L + S G++I++DDFGTG+S+L YL++F +D+LK Sbjct: 873 TNNNICIEITEGLLLDGNSAISSKLTQYRDS-GIQISLDDFGTGYSSLAYLKKFDIDFLK 931 Query: 438 IDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWI 497 ID+ F + + + + +A++ +A +L M +AEGVET Q + L+ G +F QGY Sbjct: 932 IDQSFTRNLDSNSDDFTLCEAIIVMAHKLGMKVIAEGVETDYQRKILANAGCDFGQGYLF 991 Query: 498 SRPLPLDDFVRWLKKPYTPQ 517 SRP+P++ F + P Q Sbjct: 992 SRPVPVEKFEQAFLVPVNTQ 1011 >UniRef50_A4WA59 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Enterobacter sp. 638 RepID=A4WA59_ENT38 Length = 720 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 84/251 (33%), Positives = 136/251 (54%), Gaps = 10/251 (3%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 EI ++R++F V YQP++D ++ ++T +E L+RW AGE+ PD FI+ AE+ +I Sbjct: 476 EIRDGMERDEFDVWYQPIIDARSQKMTSVEALVRWPRRPAGELTPDEFISIAETSGLIYS 535 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKL--LTSLPAHHFQI 384 L Q + D + K +NI+P F+ + K+ +T PA+ Q Sbjct: 536 LGQFVLRRACHDLEPFSDL-----KLSVNISPAQFRDPEFEEKVAKVIEMTRFPANRLQ- 589 Query: 385 VLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFI 443 LE+TE +L+ E A A L ++G +A+DDFGTG+S++ YL RF D +KID+ Sbjct: 590 -LEVTETYVLENPERARAAIANLKALGTAVALDDFGTGYSSIGYLRRFNFDTIKIDKSLA 648 Query: 444 NAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPL 503 + + ++ + +A L M VAEGVE +Q + L G + +QG+W SRP+P+ Sbjct: 649 GLVDNDEQAIALVSGTVRIASALGMAVVAEGVENEKQMKLLRLAGCDQLQGFWFSRPMPI 708 Query: 504 DDFVRWLKKPY 514 + + K Y Sbjct: 709 EAIIELRKVRY 719 >UniRef50_A8MM18 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Clostridiaceae RepID=A8MM18_ALKOO Length = 703 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 93/264 (35%), Positives = 140/264 (53%), Gaps = 7/264 (2%) Query: 253 LCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPD 312 L Y MS ++R G I E+F V YQP +D + V G E L+RW HP G IPP+ Sbjct: 444 LDYIQMSSQLRYG------IHNEEFTVYYQPQIDLKTNEVIGTEALIRWLHPKKGFIPPN 497 Query: 313 AFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQK 372 FI FAE+ I + + +F+ + + +K K +N++ L A I+K Sbjct: 498 DFIPFAETTGYITEIEKWVFKTVVEQKVKWQKEGYDNFKVSVNLSSKMLTHPQLLAYIKK 557 Query: 373 LLTSLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERF 431 +L I +E+TE ++ ++AT + L + + IA+DDFGTG+S+L YL++ Sbjct: 558 ILDEYNISGDYIEMEVTETAIIDNLEKATDVLKQLKELNITIALDDFGTGYSSLTYLQKL 617 Query: 432 TLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNF 491 +D LKIDR FI I + +L V+ LA L + VAEGVET Q +L + + Sbjct: 618 PIDILKIDRDFIKNIQDINDEAHILKLVIDLAHSLGLKVVAEGVETEAQLDYLRKNHCDI 677 Query: 492 MQGYWISRPLPLDDFVRWLKKPYT 515 +QGY+ S+PLP D +L+ T Sbjct: 678 VQGYYFSKPLPEADIKTFLENRKT 701 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 82/247 (33%), Positives = 139/247 (56%), Gaps = 1/247 (0%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 ++ A+ R++F + YQP VD + + G E L+RW+HP G + P FI AE + IV Sbjct: 685 QLRYALDRDEFVLHYQPQVDLKTGEIIGAEALIRWQHPELGLLGPVRFIEVAEERGFIVQ 744 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 + + + R A+ + + +N++ + +Q+ L++ + + Sbjct: 745 IGNWVIQEACRQLAQWRRQGLPRISLAVNLSTLQFRQQDLAVHLQRALSAHGLVGSDLDV 804 Query: 387 EITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 E+TE ++ + E T + S+G++++IDDFGTG+S+L YL+RF D LKIDR F+ Sbjct: 805 EVTESVIMDDVETTIHTIDRIKSMGLQLSIDDFGTGYSSLSYLKRFKADKLKIDRSFVRD 864 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 I + S + A++ +AK LNM +AEGVET EQ ++L G + QGY +++P+P + Sbjct: 865 IPMDADDSAIARAIINMAKNLNMTVIAEGVETIEQWKFLDREGCHAAQGYLLAKPVPAKE 924 Query: 506 FVRWLKK 512 F R L+K Sbjct: 925 FERLLEK 931 >UniRef50_D2TLT3 Putative signal transduction protein n=2 Tax=Enterobacteriaceae RepID=D2TLT3_CITRO Length = 516 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 91/284 (32%), Positives = 145/284 (51%), Gaps = 10/284 (3%) Query: 234 NDVWYAFLL-----GGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQ 288 +++WY L G G + +L + ++ P + AI V YQPVV Sbjct: 236 DNIWYRQALIWIPAGIAPGLLAAVLIFRILRRLQSPHHRLRDAIHNRNIKVHYQPVVSLA 295 Query: 289 ALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPV 348 + +V G E L RW P + PD FI AE + PLT+ + E + + + + P Sbjct: 296 SGKVVGAEALARWPQPDGCYLSPDFFIPLAEQTGLTEPLTRLIIETVFEEMGKWLRQHPE 355 Query: 349 GVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHS 408 INI + L SE A + LL QI LE+TER+ + ++ + A Sbjct: 356 Q-HISINIESEDLASEKLPALLSTLLNRHQIAPSQIALELTEREFADPKTSSPIVARYRK 414 Query: 409 VGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNM 468 G + IDDFGTG+S+L YL+ +D LKID+ F++A+ + +T +++ +AK L + Sbjct: 415 AGHAVYIDDFGTGYSSLSYLQNLEVDILKIDKSFVDALEYKNVTPHIIE----MAKALKL 470 Query: 469 LTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 +AEG+ET +Q WL + GV++ QG+ S+ LP +F+ W +K Sbjct: 471 KMIAEGIETAKQEEWLRQHGVHYGQGWLYSKALPKAEFILWAEK 514 >UniRef50_C4SZL5 Predicted signal transduction protein containing sensor and EAL domains n=1 Tax=Yersinia intermedia ATCC 29909 RepID=C4SZL5_YERIN Length = 512 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 133/466 (28%), Positives = 222/466 (47%), Gaps = 41/466 (8%) Query: 73 LDTCQQANPE---LTARAAFSMNVRTFVLVKD------KKTFCSSATGEMDIPLNELIPA 123 LD Q +P+ L +R F + + V+V D KT CS G+ +++ + Sbjct: 63 LDKTLQRDPQDCSLKSREVFIPELLSAVVVTDILYTLPDKTLCSLTYGDNIKAISK--KS 120 Query: 124 LDIN-KNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDY 182 L N + V IL + K N L+ GVFA L F+ + QE Sbjct: 121 LVTNWQGVQFFILADDVLAAGKG-------NILVGKKGVFALLPQRQLAG-FHVTGQEQR 172 Query: 183 DGVALIIGNTALSTFSSRL------MNVNELTDMPVRETKIAGIPLT-VRLYADDWTWND 235 + ++I N L +S + ++++ D +R +PLT +R + W Sbjct: 173 TQLHIMINNELLVHSASSTAPDNGWLIISKIADSGLRVE--FSVPLTALRSFWLHAFWPA 230 Query: 236 VWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGL 295 W LL +S + CY + M+ + I A+++ F + YQP+V+ + ++ L Sbjct: 231 QWVINLLLLLSYSTF-FYCYARHKLSMK--KAIRRALQKGNFCLHYQPIVEIKTGQIQSL 287 Query: 296 EVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGIN 355 E L+RW IP D FI AE +I +TQ++ + D + L + P + +N Sbjct: 288 EALIRWPTTSGNAIPADVFIPVAEQTGLICSITQYVLHQVMIDLSVLHQTHP-KLMIAVN 346 Query: 356 IAPDHLHSESFKADI--QKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEI 413 I+ L + F + Q +L H+ + LEITER ++ ++ A + L G + Sbjct: 347 ISAADLSAADFATALRTQCAAYALSPHYLK--LEITERSLVDDENAKRNMLSLSEEGFML 404 Query: 414 AIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAE 473 +DDFGTG+S+L YL + + LKIDR FI +G T V+ ++++A++LNM +AE Sbjct: 405 VLDDFGTGYSSLSYLNKLPVQTLKIDRSFILGLGMNIATGSVVPQIVSMAQQLNMQVIAE 464 Query: 474 GVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL----KKPYT 515 GVET EQA+ L + V + QG+ + +PL D + L ++PY+ Sbjct: 465 GVETAEQAQALLDLDVPYAQGWLYDKAMPLADIHKKLIINQQQPYS 510 >UniRef50_UPI000192678C PREDICTED: hypothetical protein n=1 Tax=Hydra magnipapillata RepID=UPI000192678C Length = 357 Score = 154 bits (389), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 87/240 (36%), Positives = 135/240 (56%), Gaps = 9/240 (3%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 A+ +++ + +QP VD + ++ G E L+RWRHPV G I P FI AE MI L Sbjct: 109 ALHQQELQLYWQPKVDLKTWKIVGAETLMRWRHPVLGWISPGEFIPIAEQSGMIAALGS- 167 Query: 331 LFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITE 390 + L+ +A + G+K +N++ L +SF + +Q + + Q+ LE+TE Sbjct: 168 -WALL--EACRMHSSALAGLKVSVNVSSMQLRDDSFLSVLQDAMDEFQVNPGQLELELTE 224 Query: 391 RDMLKEQEATQLFAWLHSV---GVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 L + A A LH++ GV++A+DDFGTG+S+L YL F D LKIDR F+ + Sbjct: 225 SVFL--ESADHALAMLHAIKKTGVKLAMDDFGTGYSSLSYLRSFPFDTLKIDRAFVIELV 282 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + V+ + LA+ L M TV EGVETP+Q + G + +QGY +++P+PL +FV Sbjct: 283 EKKDAEAVVHMITGLAQTLGMRTVCEGVETPQQLEAIQRAGCDEVQGYIVAKPMPLQEFV 342 >UniRef50_Q28N76 Diguanylate cyclase/phosphodiesterase n=2 Tax=Rhodobacteraceae RepID=Q28N76_JANSC Length = 664 Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 96/257 (37%), Positives = 141/257 (54%), Gaps = 15/257 (5%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R R EI +A+ +QF + YQP VD + R+ +E L RWRHP G +PPD FI E Sbjct: 413 RSRTEAEIESALNAQQFELYYQPRVDLASGRIVAVEGLARWRHPDRGFVPPDEFIPICEE 472 Query: 321 QKMIVPLTQHLFEL-IARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLT--SL 377 +I L + + E+ A+ A E L V+ +NI+P +++ Sbjct: 473 TGLIHLLGRRVLEMGFAQAIAWSEAGL--DVQLSLNISPRQFSDPQLLDNLKAYADRPDF 530 Query: 378 PAHHFQIVLEITERDMLKEQEATQLFAWLHSV---GVEIAIDDFGTGHSALIYLERFTLD 434 P H +I LEITE ++ +Q+ + A LH++ G +I+IDDFGTG+S L Y+ RF L Sbjct: 531 PTH--KIELEITESVLIGDQDG--IAAKLHAITAMGYQISIDDFGTGYSNLSYISRFPLH 586 Query: 435 YLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQG 494 LKIDR FI + + P++ +L LA+ L + +VAEGVET Q WL+ G +QG Sbjct: 587 CLKIDRSFIEQL---PASGPIVRLILALAQELGVTSVAEGVETQAQFDWLTSHGCTQIQG 643 Query: 495 YWISRPLPLDDFVRWLK 511 Y+++ P P DD L+ Sbjct: 644 YFVAHPAPADDVALLLR 660 >UniRef50_B1M266 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Proteobacteria RepID=B1M266_METRJ Length = 960 Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 92/250 (36%), Positives = 134/250 (53%), Gaps = 9/250 (3%) Query: 266 REIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIV 325 R++ A+ RE F V YQP+ + R+ G E LLRW HPV G + P FI AE +IV Sbjct: 708 RDLRDALAREAFEVYYQPIYSLETDRICGFEALLRWNHPVRGFVSPAEFIPIAEELGLIV 767 Query: 326 PLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLL--TSLPAHHFQ 383 PL E + R A E P +K +N++ S S +++ L T LP + Sbjct: 768 PLG----EWVLRRACEEAARWPDELKVAVNVSAVQFTSASLVTAVREALRRTGLPGRRLE 823 Query: 384 IVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGF 442 LEITE ++ AT + L ++GV +A+DDFGTG+S+L YL F D +KID+ F Sbjct: 824 --LEITETVLVANPGATTAILHSLRALGVRVAMDDFGTGYSSLSYLRSFPFDKIKIDQSF 881 Query: 443 INAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 + + + T ++ AV+ L L M T AEGVET Q L G + +QGY SRP+P Sbjct: 882 VRDLCVKDGTDFIVRAVIGLGASLGMTTTAEGVETEAQLAHLRAEGCDEVQGYLFSRPVP 941 Query: 503 LDDFVRWLKK 512 + + +++ Sbjct: 942 VSEVASVIRR 951 >UniRef50_B8KFD6 Diguanylate cyclaSe/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KFD6_9GAMM Length = 643 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 82/251 (32%), Positives = 138/251 (54%), Gaps = 1/251 (0%) Query: 260 VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAE 319 R+ ++ TA+ R +F+VAYQP VD ++ + G+E L+RW H G IPP+ FI AE Sbjct: 388 ARLSMESDMHTALARGEFHVAYQPQVDMRSGELMGVEALMRWEHSTRGNIPPEEFIPIAE 447 Query: 320 SQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPA 379 +I+ + + E + + L+ +++ +N++ L + F A ++ ++++ Sbjct: 448 ENGLILAMGSWVLEEVCAEQKRLKNAGLSDIRYAVNVSGRQLLNPEFLALVEHIVSTKDC 507 Query: 380 HHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKI 438 Q+ LEITE +L E E A + +G+ IAIDDFGTG+S+L YL+++ L+ LKI Sbjct: 508 SGSQLELEITESVLLHEPELAAKAMQSFREMGIAIAIDDFGTGYSSLAYLKQYPLNRLKI 567 Query: 439 DRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWIS 498 D F+ I + + ++ L L++ +AEGVET EQ L G + QGY S Sbjct: 568 DASFVRDIVVDPDDRAIAQTIIALGNALDLEVIAEGVETEEQRAMLVSDGCSLGQGYLFS 627 Query: 499 RPLPLDDFVRW 509 +P+ D + + Sbjct: 628 KPISPADLLVY 638 >UniRef50_A4CBR3 Predicted signal transduction protein containing sensor and EAL domains n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CBR3_9GAMM Length = 834 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 85/257 (33%), Positives = 138/257 (53%), Gaps = 2/257 (0%) Query: 257 LMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFIN 316 LM R++ ++ AI +F + +QP +D + + G E LLRW+HP G IPPD FI Sbjct: 574 LMRNRLKLAADLHQAIANNEFSLYHQPQIDLRNNSIYGSEALLRWKHPELGFIPPDEFIP 633 Query: 317 FAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTS 376 AES +I +T+ + E + LP K INI+ L+ + LLT Sbjct: 634 VAESAGLINEITEWVVEQALLHHKHILSSLP-SHKISINISARDLNKRELPVQLLTLLTE 692 Query: 377 LPAHHFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDY 435 L IV+E+TE +K++ EA + +G+++AIDD+GTG+S+L YL + Sbjct: 693 LNIKPSSIVIELTESATVKDKTEAKNVLDDFKEMGIKVAIDDYGTGYSSLAYLSQLGFHE 752 Query: 436 LKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGY 495 +KID+ F+ + + + + +AK L+ VAEGVE+ A+ L + G QGY Sbjct: 753 IKIDKQFVFNLESNRRHQTICKTTIEMAKNLDAYVVAEGVESELVAKMLRQYGCEIAQGY 812 Query: 496 WISRPLPLDDFVRWLKK 512 + S+P+P ++ +WL++ Sbjct: 813 YFSKPMPFSEYCQWLER 829 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 83/242 (34%), Positives = 132/242 (54%), Gaps = 1/242 (0%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 A++R +F + YQP VD ++ ++ G E ++RW+HP G + P FI AE +I+ + Sbjct: 870 AVERNEFVLHYQPKVDLRSQKIIGAEAVVRWQHPELGMLSPMQFIPLAEETGLIIDIGAW 929 Query: 331 LFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITE 390 + R A E +++ V+ +N++ E+ + I LT + LEITE Sbjct: 930 IMRESCRQAVEWQQLTGQNVRVAVNLSARQFRDETLRQTIADALTESGLTPDCLELEITE 989 Query: 391 RDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTE 449 ++ E A ++ H +G + IDDFGTG+S+ YL+ F +D LKIDR F+ I + Sbjct: 990 SMIMHNAERAREVLQHFHDLGAHVLIDDFGTGYSSFGYLKHFPIDSLKIDRSFVRDIPDD 1049 Query: 450 TITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRW 509 + A++ +A L + VAEGVET EQ +L ++G + +QG+ S PL DFVR Sbjct: 1050 VDDMAITQAIIAMAHSLQIKVVAEGVETQEQLAFLKKQGCDQIQGFLFSEPLHSHDFVRM 1109 Query: 510 LK 511 LK Sbjct: 1110 LK 1111 >UniRef50_A5ERD3 Diguanylate cyclase/phosphodiesterase n=12 Tax=Bradyrhizobiaceae RepID=A5ERD3_BRASB Length = 902 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 86/246 (34%), Positives = 135/246 (54%), Gaps = 9/246 (3%) Query: 266 REIMTAIKREQFYVAYQPVVDT----QALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQ 321 +E+ AIK + + +QP + + G E L RW HPV G +PP FI AE Sbjct: 642 QELSVAIKNGELSLYFQPQASSGRTVDCSEIIGFEALARWHHPVRGFVPPSDFIPLAEES 701 Query: 322 KMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHH 381 MIV + + + R+AA K L V V N++P A + +L Sbjct: 702 GMIVEMGEWILREACREAASWPKPLQVAV----NLSPAQFVHGDLVALVHSILLETGLSP 757 Query: 382 FQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDR 440 ++ LEITE ++++ L L ++GV +++DDFG+G+S+L YL+ F D +KIDR Sbjct: 758 GRLELEITEGVLIEDFDRGVALLRRLKALGVRVSMDDFGSGYSSLSYLQAFPFDKIKIDR 817 Query: 441 GFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRP 500 F+ +G ++ ++ AV+ L +NM VAEGVETPEQ +L+E+G + +QGY + +P Sbjct: 818 AFVMNLGRNPQSAAIIRAVIGLGHGMNMSIVAEGVETPEQLGFLAEQGCDSVQGYLLGKP 877 Query: 501 LPLDDF 506 LP+D + Sbjct: 878 LPIDKY 883 >UniRef50_A9D3R1 Sensory box/GGDEF domain/EAL domain protein n=1 Tax=Shewanella benthica KT99 RepID=A9D3R1_9GAMM Length = 301 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 86/254 (33%), Positives = 138/254 (54%), Gaps = 3/254 (1%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+ +E+ A+ + F++ YQP +D + R+TG E L+RW HP G IPP+ FI AE Sbjct: 34 RLYLEQEVRLALANDDFHMVYQPKIDVKTQRITGAEALIRWHHPKNGIIPPNEFIPVAEQ 93 Query: 321 QKMIVPLTQHLFELIARDAAELEKV-LPVGVKFGINIAPDHLHSESFKADIQKLLTSLPA 379 +I+ L ++ + + + +K L V V +NI A +Q L Sbjct: 94 SDLILKLDSYILDKVINQISRWQKEGLEVPV-ISVNIPSREFQRGDLVASVQDTLRKYQV 152 Query: 380 HHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKI 438 ++ +EITER ++ E ++ L + + I++DDFGTG+S+L YL +F D LKI Sbjct: 153 VGNRLEIEITERLLMDHCEDNIKILNRLKDLDIHISVDDFGTGYSSLSYLVQFPCDVLKI 212 Query: 439 DRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWIS 498 D+ FI+ + +++A++ LA +L VAEGVET Q ++LS G + +QGY+ Sbjct: 213 DKSFIDQLPQSKDNCKIVEAIIMLAHKLGKSVVAEGVETEVQYQYLSALGCDQIQGYYFY 272 Query: 499 RPLPLDDFVRWLKK 512 +PL +DF L K Sbjct: 273 KPLNKNDFAIKLDK 286 >UniRef50_A1T0Y1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1T0Y1_PSYIN Length = 727 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 88/249 (35%), Positives = 148/249 (59%), Gaps = 11/249 (4%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 A++R++F++ YQP VDT + ++ GLE LLRW+ I P+ FI AE +IVP+ Sbjct: 458 ALQRKEFFLHYQPQVDTNSGQIIGLEALLRWQPDGQALISPEEFIPVAEEAGLIVPIG-- 515 Query: 331 LFELIARDA-AELEK-----VLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQI 384 E + R+A ++L + +L VK +N++ L S + + ++L Q+ Sbjct: 516 --EWVLREACSQLHRWHRSGLLSPTVKMAVNLSVRQLEHTSLLSTLTQILQETGLKPSQL 573 Query: 385 VLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFI 443 LEITE ++K+ + + +H++G+++++DDFGTG+S+L YL+ L LKIDR FI Sbjct: 574 ELEITETAVMKDPDLVVNILHSIHAMGIQLSLDDFGTGYSSLRYLKLLPLHVLKIDRSFI 633 Query: 444 NAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPL 503 N IG + +L++++ L++ L++ VAEGVET EQ +LS + +QGY+IS+P Sbjct: 634 NDIGGKQRDQAILESIIYLSRNLDLTVVAEGVETQEQLDFLSRFNCHSIQGYYISKPKSA 693 Query: 504 DDFVRWLKK 512 + + L K Sbjct: 694 ANIEKLLHK 702 >UniRef50_C1D4T3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D4T3_LARHH Length = 702 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 88/245 (35%), Positives = 139/245 (56%), Gaps = 7/245 (2%) Query: 277 FYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIA 336 ++AYQP ++ + RV G+E LLRW HP G +PPD FI AES +I+ L + E Sbjct: 449 LWLAYQPQLNLRNGRVAGVEALLRWNHPTLGMVPPDEFIQVAESCGLILSLGDWVMERAC 508 Query: 337 RDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLT--SLPAHHFQIVLEITERDML 394 A ++ IN++ L +Q+L+ +LPA +I LE+TE ++ Sbjct: 509 AQLASWRELYGYDFIVAINLSAAQLCDPLLVDKLQELVVRYALPAD--RIELELTESMLV 566 Query: 395 KE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITS 453 ++ +A + L +G++++IDDFGTG+S L L + + LKIDR FI I T + Sbjct: 567 EDMNQALGVLHALEDIGIQLSIDDFGTGYSNLAQLRQLPIKRLKIDRSFIQDIETNSNAR 626 Query: 454 PVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK-- 511 ++D V+ +A+ L+M VAEG ET QA +L+E G +++QG+W++R LP + WL Sbjct: 627 GIVDTVMAMARTLDMTVVAEGAETDAQAVYLAELGCDYLQGWWLARGLPPAELETWLSGF 686 Query: 512 KPYTP 516 +P P Sbjct: 687 RPTLP 691 >UniRef50_B9R6F1 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R6F1_9RHOB Length = 748 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 79/238 (33%), Positives = 124/238 (52%), Gaps = 2/238 (0%) Query: 273 KREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLF 332 K + ++ YQP ++ V G+E LLRW HP+ G I P I AE +++ L +H+ Sbjct: 480 KMQGLHLEYQPQINACDGSVCGVEALLRWNHPIYGRIAPPVIIQLAEDMEIMPQLGEHIL 539 Query: 333 ELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERD 392 +L R A+ + K +N+ P + F +++ L + LEITE Sbjct: 540 DLACRTRADWTGFVAANFKMSVNVTPSQVLQHDFADVVKQTLARYALDPSAVELEITEST 599 Query: 393 -MLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETI 451 +L + + + L +VGV A+DDFG GH++L Y++ F +D +KIDR + +E I Sbjct: 600 VLLPDDKVFEAIEALRAVGVRFALDDFGMGHTSLRYMQAFPIDTVKIDRSLTRSCHSE-I 658 Query: 452 TSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRW 509 +L ++ L+ L TV EG+ET E+ W S+ G QG+ SRPL DDFV + Sbjct: 659 NGHILKSIFDLSASLGFATVVEGIETDEEKAWFSQSGCTSFQGFLFSRPLAADDFVTY 716 >UniRef50_Q607V4 Sensory box protein/GGDEF domain protein n=1 Tax=Methylococcus capsulatus RepID=Q607V4_METCA Length = 819 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 85/251 (33%), Positives = 137/251 (54%), Gaps = 3/251 (1%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+ R++ A++R +F + Q VD R+ G E LLRW HP G + PD FI AE Sbjct: 570 RLTLERDMHAALERREFRLYLQSQVDGNG-RIVGAEALLRWEHPTEGILLPDKFIALAEE 628 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +I+P+ + +FE + + L + + +NI+P F +Q++L A+ Sbjct: 629 TGLILPIGEWVFEQVCHENVRLSQA-GHRLSLSVNISPRRFQQADFLDHVQRILKRTGAN 687 Query: 381 HFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 ++ EITE ++ + +A ++L +G+ ++DDFGTG+S+L YL+R L LKI Sbjct: 688 PHDLIFEITEGLLVSDFDDAIAKMSFLERLGIRFSVDDFGTGYSSLAYLKRLPLSELKIA 747 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 + F+N + + ++ +L++A LN+ TVAEGVET Q +L RG QGY+ S Sbjct: 748 QTFVNDLPDDPSDVALVQTILSMAYHLNLETVAEGVETRAQLEFLKARGCTRFQGYYFSP 807 Query: 500 PLPLDDFVRWL 510 PLP +F L Sbjct: 808 PLPATEFFEKL 818 >UniRef50_Q4ZZ43 PAS:GGDEF n=17 Tax=Bacteria RepID=Q4ZZ43_PSEU2 Length = 719 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 99/338 (29%), Positives = 160/338 (47%), Gaps = 29/338 (8%) Query: 177 SRQEDYDGVALIIG-NTALSTFSSRLMNVNEL---TDMPVRETKIAGIPLTVRLYADDWT 232 S + DGV + +G + ++TF N++ L D+ + E K AG Sbjct: 391 SGRRQVDGVEITLGASVGIATFPDCGSNLDGLLRAADIAMYEAKRAGRQ----------- 439 Query: 233 WNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRV 292 Y F M+G R+ + TAI F V YQP + R+ Sbjct: 440 ----QYRFYDQNMNGRA---------RSRLMLEESVRTAIDGRDFSVVYQPQIHVADGRL 486 Query: 293 TGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKF 352 G E LLRW+HP GE+PP FI E ++I L +F+ A + + Sbjct: 487 RGFEALLRWQHPAVGEVPPALFIPLLEETRLINRLGSWIFDQGAEQRQAWSHIFAPDMVL 546 Query: 353 GINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGV 411 + ++P + +++++ + QI +EITE ++ + + LH VGV Sbjct: 547 SVCVSPTQFCLPNLASELKRAMDRFELKPGQIEVEITETALVNNLTHSHKQLKLLHEVGV 606 Query: 412 EIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTV 471 IA+DDFGTG +L +L LD LK+DR F+ I + + +++ L++ L+ML + Sbjct: 607 RIALDDFGTGECSLSHLRNLQLDTLKLDRRFVANIAGSKREAAMASSIIDLSRNLDMLVI 666 Query: 472 AEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRW 509 AEGVET EQ +WL++ G MQG+ I+ P+ +D +R+ Sbjct: 667 AEGVETAEQYQWLADNGCQVMQGFLIAHPMLPEDALRF 704 >UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBJ6_METSD Length = 1150 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 85/258 (32%), Positives = 142/258 (55%), Gaps = 2/258 (0%) Query: 257 LMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFIN 316 + RMR R++ A+ QF V +QP+VD + R+ E L+RW+HP G I P FI Sbjct: 890 MAQARMRMMRDLRNALGLNQFTVYFQPIVDLSSQRIHKAEALIRWQHPELGFISPAEFIP 949 Query: 317 FAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSES-FKADIQKLLT 375 AE +I + +F+ A+ + ++ + +N +P + D + L+ Sbjct: 950 LAEETGLIHEIGDWVFQQSAQLVKQCIPIVGDDFQVSVNKSPVQFRDRTQAHQDWMEYLS 1009 Query: 376 SLPAHHFQIVLEITERDMLKEQEA-TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLD 434 L IV+EITE +L + G+++AIDDFGTG+S+L YL++F +D Sbjct: 1010 GLGLSGHNIVVEITEGLLLNADSGISDKLLHFRDAGMQVAIDDFGTGYSSLSYLKKFDID 1069 Query: 435 YLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQG 494 YLKID+ F+ + E + +A+ T+A +L++ +AEGVET Q L++ G ++ QG Sbjct: 1070 YLKIDQSFVRNLSGEGEDLALCEAIATMAHKLDLRVIAEGVETTAQRDLLAQIGCDYGQG 1129 Query: 495 YWISRPLPLDDFVRWLKK 512 Y SRP+P ++F++ L++ Sbjct: 1130 YLFSRPVPAEEFMQLLER 1147 >UniRef50_B1WR61 Putative uncharacterized protein n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WR61_CYAA5 Length = 700 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 83/244 (34%), Positives = 135/244 (55%), Gaps = 3/244 (1%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+ + A+++++FY+ YQP++ + ++ G E LLRW HP G I P FI AE Sbjct: 426 RLEVESSLRKALEKQEFYLYYQPIISFKTSQLIGFEALLRWHHPTQGWISPATFIPIAEE 485 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVG--VKFGINIAPDHLHSESFKADIQKLLTSLP 378 +IV L Q + + + + P +K +NI+ L+ F ++K+L Sbjct: 486 TGLIVSLGQWVLQEACHQISIWQSHFPFSEPLKVSVNISSFQLNQMDFVEQVKKVLEESK 545 Query: 379 AHHFQIVLEITERDMLKEQEATQL-FAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLK 437 Q+ LEITE ++ E+T L +GV+I+IDDFGTG+S+L YL++ +D LK Sbjct: 546 IKASQLNLEITETVIMNNIESTSFKLQCLQKLGVKISIDDFGTGYSSLNYLQQLPIDILK 605 Query: 438 IDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWI 497 IDR F+ + + +++A++ L L M T+AEG+ET EQ + GV++ QG+ Sbjct: 606 IDRSFVRRLESNPSEFQIIEAIIKLGNILGMETLAEGIETSEQYNLIQSLGVDYAQGFIF 665 Query: 498 SRPL 501 S+PL Sbjct: 666 SKPL 669 >UniRef50_A7IP89 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IP89_XANP2 Length = 758 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 91/269 (33%), Positives = 143/269 (53%), Gaps = 17/269 (6%) Query: 251 GLLCYYLMS------VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHP 304 G+ +Y + VRM ++ + RE+F + +QPVVD R+ G E L+RW+ P Sbjct: 476 GIYSFYTQALTRSARVRMEMEADLRRGLVREEFRLNFQPVVDLANGRIAGAEALVRWQSP 535 Query: 305 VAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKF---GINIAPDHL 361 V G + P+ FI AE +I PL + E + ++ K G +N++P Sbjct: 536 VHGLVLPNRFIPLAEETGLIEPLGDWVLEEACQ---QMAKWTAAGADLDFIAVNLSPRQF 592 Query: 362 HSESFKADIQKLL--TSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFG 419 + I+++L T LPA ++ EITE + A + + GV IA+DDFG Sbjct: 593 QRGTLCERIEEVLRRTGLPAARLEV--EITENVLFGAVAAERKLRDMRDSGVRIALDDFG 650 Query: 420 TGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPE 479 TG+S+L YL+RF + LKIDR F++ + + + A++++A+ L + VAEG+E PE Sbjct: 651 TGYSSLAYLKRFPISKLKIDRSFVHDL-PRAADAEIATAIISIARALGLDVVAEGIEAPE 709 Query: 480 QARWLSERGVNFMQGYWISRPLPLDDFVR 508 Q +L ERG F QGY RP+ + F+R Sbjct: 710 QCAFLKERGCGFGQGYLFGRPVTSERFLR 738 >UniRef50_B8K9C5 PAS fold family protein n=7 Tax=Vibrionaceae RepID=B8K9C5_VIBPA Length = 692 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 91/243 (37%), Positives = 134/243 (55%), Gaps = 13/243 (5%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 E+ A+++ V YQP V+ + + G E L+RW+HPV G I P AFI AE +I Sbjct: 440 ELQKALQQNGLEVWYQPKVNARDFSINGAEALIRWKHPVEGYISPAAFIPVAERAGLI-- 497 Query: 327 LTQHLFELIARDAA------ELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +HL ++ RD +L+ +LP V IN++P+ + ++KLL + Sbjct: 498 --EHLGRVVMRDVFSTVKRWKLQGILPGRV--AINLSPEQFGNPKLIDYMEKLLRTTELD 553 Query: 381 HFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 I E+TE ++ + + T Q+ + +G ++IDDFGTG+S+L YL RF LD LKID Sbjct: 554 PNCITFELTESAVMSDSDHTLQMLNAIKKLGFSLSIDDFGTGYSSLSYLARFPLDELKID 613 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 R FI I T V++ ++ L K LN+ VAEGVET +QA LS N +QG+ R Sbjct: 614 RAFITDIDTLPKQVTVIENIINLGKSLNLTVVAEGVETQQQATLLSNLNCNSIQGFHFHR 673 Query: 500 PLP 502 P P Sbjct: 674 PQP 676 >UniRef50_C7R6X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6X9_KANKD Length = 855 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 86/244 (35%), Positives = 134/244 (54%), Gaps = 2/244 (0%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 A++R + + YQP+V V G+E L+RW+HP+ G IPP FI AE +I + Sbjct: 612 AVERNELVLHYQPLVSFNDFTVVGVEALIRWQHPIQGLIPPYKFIPLAEETGIIGDIGLW 671 Query: 331 LFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITE 390 + R E +K + +NI+ + + ++ +L ++ LE+TE Sbjct: 672 VLREACRQMVEWDKAGLNVARASVNISVQQIETGLLPKQVESVLKETGLAAERLYLELTE 731 Query: 391 RDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTE 449 ++++ Q+A+ +GV++A+DDFGTG+S++ YL+R LD LKIDR FI IG + Sbjct: 732 STIMQDPQQASLAMTEFQKMGVKLAVDDFGTGYSSMAYLKRLPLDRLKIDRSFIKDIGAD 791 Query: 450 TITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP-LDDFVR 508 T + A++ LAK L + TVAEGVE QA +L G + QGY S+P+P L+ Sbjct: 792 TNDEVICKAIVQLAKSLGLETVAEGVEEESQAEFLKGLGCDVAQGYLYSKPVPALELTAS 851 Query: 509 WLKK 512 W KK Sbjct: 852 WKKK 855 >UniRef50_A4ADN6 Sensory box EAL/GGDEF family protein (Fragment) n=1 Tax=Congregibacter litoralis KT71 RepID=A4ADN6_9GAMM Length = 399 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 84/242 (34%), Positives = 132/242 (54%), Gaps = 1/242 (0%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+ ++ A++RE+F+VAYQP VD + + G+E LLRW HP G I P FI AE Sbjct: 142 RLSLESDMRRALEREEFHVAYQPQVDMHSGALIGVEALLRWDHPEKGAISPKHFIPIAEE 201 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 I+ L + + + + + L G++F +N++ L E F I+ ++ + Sbjct: 202 NGQILALGKWVLQKVCAEQIRLADAGLAGIRFAVNVSGRQLLHEGFLEFIEGMIKTGTCR 261 Query: 381 HFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 + LEITE +L E E A + + +G+ I++DDFGTG+S+L YL+++ L+ LKID Sbjct: 262 GEALELEITESVLLSEPELAAEAMQAIRKLGIAISVDDFGTGYSSLAYLKQYPLNRLKID 321 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 F+ I + + ++ L LN+ +AEGVET EQ L G + QG+ SR Sbjct: 322 ASFVRDIVIDPDDRAIAQTIIALGNALNLEVIAEGVETEEQRAILVNDGCSLGQGFLFSR 381 Query: 500 PL 501 PL Sbjct: 382 PL 383 >UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K569_AZOSB Length = 947 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 93/260 (35%), Positives = 139/260 (53%), Gaps = 9/260 (3%) Query: 258 MSVRMRPGREI----MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDA 313 MS+R+R E+ A+ R++F V YQP R+ G E L+RWRHP G I P+ Sbjct: 675 MSLRVRERLELENLLRQAMSRDEFEVFYQPQFGLSDHRILGCEALVRWRHPERGLIAPER 734 Query: 314 FINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKL 373 FI AE +IV + + + E A + +N +P +H +F + ++ Sbjct: 735 FIPLAEDTGLIVAIGRRVLETACHTAQGWRAAGLGDIPVAVNASPVQIHHGNFAETVAEV 794 Query: 374 L--TSLPAHHFQIVLEITERDMLKEQEATQLFAW-LHSVGVEIAIDDFGTGHSALIYLER 430 L T LPA +I E+TE ++ + L +GV +AIDDFGTG+S+L YL+R Sbjct: 795 LAETGLPARLLEI--ELTESTLMADAAPVAATLAALQDMGVRLAIDDFGTGYSSLAYLKR 852 Query: 431 FTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVN 490 F LD LKIDR FIN + + + + A++ +A+ L M +AEGVET Q R+L ++G Sbjct: 853 FQLDKLKIDRSFINDLPGDPDDANITVAIIGIARSLGMSVIAEGVETAAQERFLVDQGCA 912 Query: 491 FMQGYWISRPLPLDDFVRWL 510 QGY S P+P++ L Sbjct: 913 EGQGYLFSPPVPVESMTALL 932 >UniRef50_C6MET2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MET2_9PROT Length = 753 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 91/279 (32%), Positives = 143/279 (51%), Gaps = 34/279 (12%) Query: 254 CYYLMS-------VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVA 306 C Y S R R E+ A++ +Q ++ YQP+V + E L+RW+HP Sbjct: 484 CSYFTSNMRKATETRSRIAYELRHALREQQLFLMYQPIVKLATGSIHKAEALVRWQHPER 543 Query: 307 GEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAP-------- 358 G + P FI+ AE +I + +F+ A + + IN +P Sbjct: 544 GTVSPVEFISIAEESNLISEIGDWVFKQAVNQVAAWQANYNTNFQISINKSPKQFISKMS 603 Query: 359 ---DHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE--ATQLFAWLHSVGVEI 413 +HLH + L H I++EITE +L E QL + GV++ Sbjct: 604 DWVNHLHEQK-----------LDGH--SIIVEITENLLLDVHELVVKQLLNF-RDAGVQV 649 Query: 414 AIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAE 473 AIDDFGTG+S+L YL++F +DYLKID+ FI+ + + + + +AV+T+A RL M +AE Sbjct: 650 AIDDFGTGYSSLSYLKKFDIDYLKIDQSFISNLDSRSNDRILCEAVITMAHRLGMKVIAE 709 Query: 474 GVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 GVET Q + L G ++ QGY+ S+PL ++F +L++ Sbjct: 710 GVETDSQKQLLIAMGCDYGQGYFFSKPLTTENFEVFLQQ 748 >UniRef50_C1SL51 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SL51_9BACT Length = 1016 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 77/243 (31%), Positives = 142/243 (58%), Gaps = 3/243 (1%) Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 AI+ ++F + YQP +D V G+E LLRW +P G IPPD FI +E +I+P+ + Sbjct: 772 AIENDEFSLHYQPKIDLATDSVMGMEALLRWHNPELGFIPPDKFIPLSEDSGLILPIGEW 831 Query: 331 LFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITE 390 + + D A+L K +K IN++ + ++K + + ++ + EITE Sbjct: 832 VMKRALSDTAKLHKEGFADLKIAINLSLRQFMKKGLVEFVEKSIETAGLNNRNVEFEITE 891 Query: 391 RDMLKEQEAT--QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGT 448 ++ E +T ++ + ++ ++ AIDDFGTG+S++ YL++ + LKIDR +I+ I + Sbjct: 892 -NIFTEDLSTISRIMNEISNLNIKFAIDDFGTGYSSIGYLKKMPISTLKIDRSYISKIDS 950 Query: 449 ETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVR 508 +T + ++ +V+ ++K L + VAEG ET Q L + G + +QGY+ +P+P D+F+ Sbjct: 951 DTDSESIVSSVILMSKSLGLNVVAEGAETESQVNMLKDMGCSIVQGYYYGKPMPYDEFLE 1010 Query: 509 WLK 511 +++ Sbjct: 1011 FVR 1013 >UniRef50_Q07W80 Diguanylate cyclase/phosphodiesterase n=8 Tax=Shewanella RepID=Q07W80_SHEFN Length = 776 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 88/250 (35%), Positives = 140/250 (56%), Gaps = 6/250 (2%) Query: 266 REIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIV 325 R++ A+ + Q ++ +QP V+ Q+ G E L+RW+HP G IPPD FI AE+ I Sbjct: 515 RDLPIALAQGQLHLVFQPKVNIQSNHCHGAETLIRWQHPELGFIPPDEFIRLAENSGNIS 574 Query: 326 PLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTS--LPAHHFQ 383 ++ + + A+ + + + + IN++ L + DI+KLL S LP + Sbjct: 575 MISDWVLNTTIKQLAQWQ-LQGISLTVAINLSAHDLTNPQLPLDIEKLLISNHLPINALS 633 Query: 384 IVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGF 442 I E+TE ++K+ Q + ++G+ IAIDDFGTGHS+L YL+ ++ +KIDR F Sbjct: 634 I--EVTEGAVMKDAQTVIAVLQQFRNIGLAIAIDDFGTGHSSLAYLKLLPVNEVKIDRSF 691 Query: 443 INAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 I I T+ ++D+ + L K LN+ VAEGVE+ E L + +QGY S+PL Sbjct: 692 IKDIHTDATDLMIVDSSIRLIKGLNLSVVAEGVESVEGINILRGLNCDIIQGYVYSKPLK 751 Query: 503 LDDFVRWLKK 512 DDF+ W ++ Sbjct: 752 ADDFIVWFQQ 761 >UniRef50_B8KDR3 Sensory box/ggdef family protein n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8KDR3_VIBPA Length = 825 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 91/244 (37%), Positives = 139/244 (56%), Gaps = 11/244 (4%) Query: 266 REIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIV 325 RE+ AI+R + V YQP ++ + ++ G+E LLRW +P G + P FI AE +I Sbjct: 577 RELRGAIERGELSVVYQPQINAKTGKIYGVESLLRWHNPQLGHVSPLEFITLAEEIGLIS 636 Query: 326 PLTQHLFELIARDAAELEKVLP-VGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHF-- 382 L + + E R E+ K+ P + +NI+P L +ESF + +LL++ H Sbjct: 637 ELGEFVLE---RSCEEINKIFPDSDLALSVNISPMQLVNESF---VTQLLSASAKHAMPP 690 Query: 383 -QIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDR 440 +I LEITE ++ + + T + L +G I++DDFGTG+S+L YL LD LKIDR Sbjct: 691 NRITLEITENVLINDLPKVTPIINQLKELGFTISLDDFGTGYSSLSYLSNLPLDELKIDR 750 Query: 441 GFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRP 500 FI+ + ++ ++ A+L +A+ +M VAEGVET Q L E G + +QGY+I RP Sbjct: 751 VFIDKMLNSEQSNSLVKAILAIARSSDMRVVAEGVETQAQKVRLIEYGCDLLQGYFIERP 810 Query: 501 LPLD 504 L D Sbjct: 811 LSAD 814 >UniRef50_UPI00003844D4 COG2200: FOG: EAL domain n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003844D4 Length = 550 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 87/238 (36%), Positives = 127/238 (53%), Gaps = 2/238 (0%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 E+ I R+Q +AYQP VD ++ R+TG+E LLRW HP G +PP FI AE+ ++ Sbjct: 301 ELHHTIARKQLSLAYQPQVDGKSGRLTGVEALLRWHHPELGLVPPSEFIPIAEASGLVSD 360 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 L Q + E R + + V +NI+ LH F A++ + + + I L Sbjct: 361 LGQWVLETACRQIVHWQDIGMKTVPVAVNISGCDLHVSDFGANVARTVAGFGLNPASIEL 420 Query: 387 EITERDMLKE--QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFIN 444 E+TE ++ + EA + L + G AIDDFGTG+S + YL L LKIDR FI Sbjct: 421 ELTESVLISDIGSEAGRSIDRLVAAGFRFAIDDFGTGYSNMAYLRYLPLRKLKIDRSFIQ 480 Query: 445 AIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 IG + A++ +A+ L++ T+AEGVE+ EQ R L G MQG+ +P P Sbjct: 481 DIGVVHEADAITSAIVRVAEALSIKTLAEGVESMEQHRALMSLGCREMQGFLFGKPCP 538 >UniRef50_Q2BMC4 Hybrid signal transduction histidine kinase and diguanylatecyclase/phosphodiesterase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMC4_9GAMM Length = 580 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 78/236 (33%), Positives = 138/236 (58%), Gaps = 1/236 (0%) Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 ++ AIK +QF + +QP VD++ + G+E LLRW HP G IPP FI AE +I Sbjct: 333 QLRKAIKADQFELVFQPQVDSETHVLKGVEALLRWNHPERGYIPPAHFIPLAEDAGLITA 392 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 + + +F+ + + AAE V + N++ L+S + A +++ + + +V+ Sbjct: 393 IGEWIFKQVCKQAAEWRDQFGVDITVSTNLSSLQLNSPNLIASMKESIAESGVNPESVVI 452 Query: 387 EITERDMLKEQEATQL-FAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 EITE + + E L + +G+ +AIDDFGTG+S+L Y++ + +KID+ F++ Sbjct: 453 EITESIAMADIENNLLILKQITDLGLALAIDDFGTGYSSLSYIKHMPVSEVKIDKIFVDG 512 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPL 501 I ++ ++DA++T+AK L+ VAEG+E QA +L E+G + +QG++ +P+ Sbjct: 513 IPSDRGDVAIIDAIITMAKELDFRLVAEGIENQTQADYLKEKGCDVLQGFYFYKPI 568 >UniRef50_B7VQ16 Putative uncharacterized protein n=1 Tax=Vibrio splendidus LGP32 RepID=B7VQ16_VIBSL Length = 731 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 87/249 (34%), Positives = 134/249 (53%), Gaps = 4/249 (1%) Query: 266 REIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIV 325 +EI AI+ +F YQP + R+ G E L+RW+ P + PD FI AE +I+ Sbjct: 473 KEINNAIENREFIPYYQPQFCLKTNRIIGAEALMRWKKPNGDLVRPDLFIELAEQSHLII 532 Query: 326 PLTQHLFELIARDAAELE--KVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQ 383 P+ H+FE D + + K L GVK +NI+ ++ Q L Sbjct: 533 PMGAHIFEQATTDCQQWQNHKAL-AGVKVAVNISSIQFSEQNILDLTQLTLEKTGLSPSL 591 Query: 384 IVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGF 442 + LEITE ML + + + L + +EIA+DDFGTG+S+L YL+ +D LKIDR F Sbjct: 592 LELEITESAMLGDVSKVVAVLNDLKKLNIEIALDDFGTGYSSLSYLKLLPIDRLKIDREF 651 Query: 443 INAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 + + + T +L + LA L++ +AEG+E EQ +L G + +QG++ ++P+P Sbjct: 652 VKDLLSNTDDQAILSMICKLATELSLNVLAEGIEEKEQLEFLGRAGCHEVQGFYFAKPMP 711 Query: 503 LDDFVRWLK 511 LDDFV + K Sbjct: 712 LDDFVLFAK 720 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P76446 Protein rtn n=101 Tax=Enterobacteriaceae RepID=R... 695 0.0 UniRef50_A8GGV3 Diguanylate phosphodiesterase n=11 Tax=Enterobac... 563 e-159 UniRef50_C9XWJ5 Protein rtn n=9 Tax=Enterobacteriaceae RepID=C9X... 549 e-155 UniRef50_B2VIJ7 Rtn protein n=9 Tax=Enterobacteriaceae RepID=B2V... 508 e-142 UniRef50_A4TND3 Membrane protein n=16 Tax=Enterobacteriaceae Rep... 495 e-138 UniRef50_B2VJL5 Putative uncharacterized protein rtn n=1 Tax=Erw... 474 e-132 UniRef50_A8GFM2 EAL domain protein n=2 Tax=Serratia RepID=A8GFM2... 466 e-130 UniRef50_A0KNV8 Rtn protein n=9 Tax=Gammaproteobacteria RepID=A0... 465 e-129 UniRef50_P76261 Uncharacterized protein yoaD n=124 Tax=Enterobac... 464 e-129 UniRef50_D0GSB3 Rtn protein n=6 Tax=Vibrio RepID=D0GSB3_VIBMI 462 e-128 UniRef50_A4SI84 EAL domain protein n=3 Tax=Gammaproteobacteria R... 461 e-128 UniRef50_C6DJC0 EAL domain protein n=4 Tax=Pectobacterium RepID=... 458 e-127 UniRef50_A6AJG8 Rtn protein n=1 Tax=Vibrio harveyi HY01 RepID=A6... 452 e-125 UniRef50_C8QG51 EAL domain protein n=3 Tax=Enterobacteriaceae Re... 452 e-125 UniRef50_A5W2V7 Diguanylate phosphodiesterase n=16 Tax=Pseudomon... 444 e-123 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 443 e-123 UniRef50_C6C3R8 Diguanylate phosphodiesterase n=1 Tax=Dickeya da... 443 e-123 UniRef50_C6CFE9 Diguanylate phosphodiesterase n=2 Tax=Dickeya Re... 442 e-122 UniRef50_A6V3S1 Aminoglycoside response regulator n=3 Tax=Proteo... 439 e-121 UniRef50_C6UPQ0 Predicted protein n=10 Tax=Enterobacteriaceae Re... 438 e-121 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 436 e-120 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 434 e-120 UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Maripro... 433 e-120 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 432 e-119 UniRef50_Q1VEI6 Putative uncharacterized protein n=1 Tax=Vibrio ... 432 e-119 UniRef50_B4T8H8 Cyclic diguanylate phosphodiesterase (EAL) domai... 430 e-119 UniRef50_Q7P1U8 Putative uncharacterized protein n=1 Tax=Chromob... 428 e-118 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 427 e-118 UniRef50_C5BG29 Cyclic diguanylate phosphodiesterase (EAL) n=2 T... 426 e-118 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 424 e-117 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 424 e-117 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 424 e-117 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 423 e-117 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 423 e-116 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 423 e-116 UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibac... 423 e-116 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 422 e-116 UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 422 e-116 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 422 e-116 UniRef50_Q1K1R0 Response regulator receiver modulated diguanylat... 422 e-116 UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/P... 421 e-116 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 421 e-116 UniRef50_B6BIT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 420 e-116 UniRef50_UPI00016A4C59 diguanylate phosphodiesterase n=1 Tax=Bur... 419 e-116 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 419 e-116 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 419 e-115 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 419 e-115 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 419 e-115 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 418 e-115 UniRef50_D2TJN3 Putative exported protein n=1 Tax=Citrobacter ro... 417 e-115 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 417 e-115 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 417 e-115 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 416 e-115 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 416 e-115 UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 415 e-114 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 414 e-114 UniRef50_A0KH05 EAL domain protein n=1 Tax=Aeromonas hydrophila ... 414 e-114 UniRef50_B7HSZ4 Response regulator receiver modulated diguanylat... 414 e-114 UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/P... 414 e-114 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 414 e-114 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 414 e-114 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 414 e-114 UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/P... 414 e-114 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 414 e-114 UniRef50_Q47EK9 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 413 e-114 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 413 e-114 UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 413 e-114 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 413 e-114 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 413 e-113 UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 413 e-113 UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 413 e-113 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 412 e-113 UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase... 412 e-113 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 412 e-113 UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 411 e-113 UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/P... 411 e-113 UniRef50_C1HI32 Rtn protein n=6 Tax=Escherichia RepID=C1HI32_9ESCH 411 e-113 UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobac... 411 e-113 UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/P... 410 e-113 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 409 e-112 UniRef50_A0LH12 Response regulator receiver modulated diguanylat... 408 e-112 UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbi... 408 e-112 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 408 e-112 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 407 e-112 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 407 e-112 UniRef50_A0KT96 EAL domain protein n=9 Tax=Shewanella RepID=A0KT... 406 e-112 UniRef50_A6AP35 Protein rtn n=4 Tax=Vibrionales RepID=A6AP35_VIBHA 406 e-112 UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magneto... 406 e-112 UniRef50_A4XXL0 Diguanylate cyclase/phosphodiesterase n=26 Tax=c... 406 e-111 UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/P... 406 e-111 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 406 e-111 UniRef50_B8HRI7 Response regulator receiver modulated diguanylat... 406 e-111 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 406 e-111 UniRef50_B5ED91 Diguanylate cyclase/phosphodiesterase n=3 Tax=Ge... 405 e-111 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 405 e-111 UniRef50_A4U1P1 Sensory box/GGDEF family protein n=1 Tax=Magneto... 405 e-111 UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 405 e-111 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 405 e-111 UniRef50_Q3MFD3 Diguanylate cyclase/phosphodiesterase n=4 Tax=No... 404 e-111 UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 404 e-111 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 404 e-111 UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/P... 404 e-111 UniRef50_C5RNC8 Diguanylate cyclase/phosphodiesterase with PAS/P... 404 e-111 UniRef50_B8GNC0 Signal transduction protein containing a membran... 404 e-111 UniRef50_B5XY29 Cyclic diguanylate phosphodiesterase (EAL) domai... 404 e-111 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 404 e-111 UniRef50_A9AQW1 Diguanylate phosphodiesterase n=16 Tax=Burkholde... 404 e-111 UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 404 e-111 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 404 e-111 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 403 e-110 UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 402 e-110 UniRef50_B1M266 Diguanylate cyclase/phosphodiesterase with PAS/P... 402 e-110 UniRef50_A3J7L9 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 402 e-110 UniRef50_Q0G5H0 GGDEF family protein n=1 Tax=Fulvimarina pelagi ... 402 e-110 UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 402 e-110 UniRef50_A1ASF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 402 e-110 UniRef50_Q1GYK0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 401 e-110 UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID... 401 e-110 UniRef50_Q7NXP8 Probable sensory box/GGDEF family protein n=1 Ta... 401 e-110 UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 401 e-110 UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 401 e-110 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 401 e-110 UniRef50_A6WTB4 Diguanylate cyclase/phosphodiesterase with PAS/P... 401 e-110 UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/P... 401 e-110 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 401 e-110 UniRef50_B1XXA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 401 e-110 UniRef50_B2UJ08 Diguanylate cyclase/phosphodiesterase n=5 Tax=Ra... 401 e-110 UniRef50_A3JQI8 Sensory box protein n=2 Tax=Rhodobacterales RepI... 400 e-110 UniRef50_Q89HX5 Bll5864 protein n=1 Tax=Bradyrhizobium japonicum... 400 e-110 UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 400 e-110 UniRef50_Q4KBF3 Response regulator/GGDEF domain/EAL domain prote... 400 e-110 UniRef50_C6XBI7 Diguanylate cyclase/phosphodiesterase with PAS/P... 399 e-110 UniRef50_A1AMG1 Response regulator receiver modulated diguanylat... 399 e-110 UniRef50_B1XQ65 Sensory box/GGDEF family protein n=1 Tax=Synecho... 399 e-109 UniRef50_B2JUP6 Diguanylate cyclase/phosphodiesterase with PAS/P... 399 e-109 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 399 e-109 UniRef50_A8MJT4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Al... 399 e-109 UniRef50_B8GL67 Diguanylate cyclase/phosphodiesterase with PAS/P... 399 e-109 UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuni... 399 e-109 UniRef50_C1D1W4 Putative diguanylate-cyclase n=1 Tax=Deinococcus... 399 e-109 UniRef50_C6CKZ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 399 e-109 UniRef50_Q8DL70 Tll0627 protein n=2 Tax=Chroococcales RepID=Q8DL... 399 e-109 UniRef50_B7JYN2 Response regulator receiver modulated diguanylat... 398 e-109 UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 398 e-109 UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=... 398 e-109 UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 398 e-109 UniRef50_C9PD80 Rtn protein n=2 Tax=Vibrio RepID=C9PD80_VIBFU 397 e-109 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 397 e-109 UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/P... 397 e-109 UniRef50_C6QP03 Diguanylate cyclase/phosphodiesterase with PAS/P... 397 e-109 UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylat... 397 e-109 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 397 e-109 Sequences not found previously or not previously below threshold: UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 439 e-121 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 434 e-120 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 428 e-118 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 423 e-117 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 422 e-116 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 421 e-116 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 418 e-115 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 417 e-115 UniRef50_C6ML43 Response regulator receiver modulated diguanylat... 417 e-115 UniRef50_A1SZV0 Response regulator receiver modulated diguanylat... 416 e-115 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 416 e-114 UniRef50_Q1JWP9 Diguanylate cyclase/phosphodiesterase with PAS/P... 416 e-114 UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiat... 416 e-114 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 416 e-114 UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibac... 415 e-114 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 415 e-114 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 414 e-114 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 414 e-114 UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ma... 413 e-114 UniRef50_C1DB08 Predicted signal transduction protein containing... 413 e-113 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 413 e-113 UniRef50_Q3A1F4 Response regulator receiver modulated diguanylat... 412 e-113 UniRef50_B7GID3 Multidomain signal transduction protein (Contain... 412 e-113 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 412 e-113 UniRef50_Q2W3S8 Predicted signal transduction protein containing... 411 e-113 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 411 e-113 UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Maripro... 411 e-113 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 411 e-113 UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/P... 411 e-113 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 410 e-113 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 409 e-113 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 409 e-112 UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 409 e-112 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 409 e-112 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 409 e-112 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 409 e-112 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 409 e-112 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 408 e-112 UniRef50_B4W3W9 Cyclic diguanylate phosphodiesterase (EAL) domai... 408 e-112 UniRef50_C6E011 Response regulator receiver modulated diguanylat... 407 e-112 UniRef50_A0L613 Diguanylate cyclase/phosphodiesterase with PAS/P... 407 e-112 UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF s... 407 e-112 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 407 e-112 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 407 e-112 UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC 407 e-112 UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 407 e-112 UniRef50_C6D8Q9 Diguanylate cyclase/phosphodiesterase with PAS/P... 407 e-112 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 407 e-112 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 407 e-112 UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 407 e-112 UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4... 406 e-112 UniRef50_C5V2W0 Response regulator receiver modulated diguanylat... 406 e-112 UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplast... 406 e-111 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 406 e-111 UniRef50_A8VRH4 Putative uncharacterized protein n=1 Tax=Bacillu... 406 e-111 UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 406 e-111 UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Co... 406 e-111 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 405 e-111 UniRef50_Q47HF3 Response regulator receiver modulated diguanylat... 405 e-111 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 405 e-111 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 405 e-111 UniRef50_A1K5F7 EAL/GGDEF-domain containing signaling protein n=... 404 e-111 UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/P... 404 e-111 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 404 e-111 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 404 e-111 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 403 e-111 UniRef50_A8FYM5 Signal transduction protein containing a membran... 403 e-111 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 403 e-111 UniRef50_B1Y5R0 Response regulator receiver modulated diguanylat... 403 e-111 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 402 e-110 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 402 e-110 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 402 e-110 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 402 e-110 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 402 e-110 UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/P... 402 e-110 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 401 e-110 UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=ce... 401 e-110 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 401 e-110 UniRef50_B7KEZ6 Response regulator receiver modulated diguanylat... 401 e-110 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 401 e-110 UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF s... 400 e-110 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 400 e-110 UniRef50_Q2SF23 Predicted signal transduction protein containing... 399 e-110 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 399 e-109 UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/P... 399 e-109 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 399 e-109 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 399 e-109 UniRef50_C6P3H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 399 e-109 UniRef50_D2SGK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 399 e-109 UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/P... 399 e-109 UniRef50_B6BGL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 399 e-109 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 398 e-109 UniRef50_Q07P60 Diguanylate cyclase/phosphodiesterase with PAS/P... 398 e-109 UniRef50_Q0BFB8 Response regulator receiver modulated diguanylat... 398 e-109 UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Cauloba... 398 e-109 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 397 e-109 UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation ki... 397 e-109 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 397 e-109 >UniRef50_P76446 Protein rtn n=101 Tax=Enterobacteriaceae RepID=RTN_ECOLI Length = 518 Score = 695 bits (1795), Expect = 0.0, Method: Composition-based stats. Identities = 518/518 (100%), Positives = 518/518 (100%) Query: 1 MFIRAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFAD 60 MFIRAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFAD Sbjct: 1 MFIRAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFAD 60 Query: 61 LKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNEL 120 LKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNEL Sbjct: 61 LKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNEL 120 Query: 121 IPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQE 180 IPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQE Sbjct: 121 IPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQE 180 Query: 181 DYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAF 240 DYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAF Sbjct: 181 DYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAF 240 Query: 241 LLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLR 300 LLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLR Sbjct: 241 LLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLR 300 Query: 301 WRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDH 360 WRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDH Sbjct: 301 WRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDH 360 Query: 361 LHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGT 420 LHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGT Sbjct: 361 LHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGT 420 Query: 421 GHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQ 480 GHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQ Sbjct: 421 GHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQ 480 Query: 481 ARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQW 518 ARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQW Sbjct: 481 ARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQW 518 >UniRef50_A8GGV3 Diguanylate phosphodiesterase n=11 Tax=Enterobacteriaceae RepID=A8GGV3_SERP5 Length = 528 Score = 563 bits (1451), Expect = e-159, Method: Composition-based stats. Identities = 232/508 (45%), Positives = 326/508 (64%) Query: 2 FIRAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADL 61 F R + R+ L+ V ++ IL + + H+ + QK+ F +L Sbjct: 7 FARHVSHRRRSLVKSSVVALVFFILFMGITLSLINHQRTQYQRAVEQRTQKFTLDTFNNL 66 Query: 62 KSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELI 121 RL PLT C + PE+T +AAF VRTF+LVK+ +CSSATG+M + L + Sbjct: 67 TQIMQRLMPLTEQPCSSSQPEITYQAAFHAGVRTFMLVKNGFAYCSSATGDMMLALKNIY 126 Query: 122 PALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQED 181 P +D + +D+ + GTP+VP KPA +W R +++G+ A L++ L P + + E Sbjct: 127 PEIDQRQRLDLKLQQGTPLVPGKPAFAVWLRQAGKEDTGILATLDIGLMPQQMFGTSPER 186 Query: 182 YDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFL 241 G+A+I+G+ AL++FS LM VN+L D IAG P+ + Y T ND+ L Sbjct: 187 APGIAIILGDRALTSFSPNLMPVNQLPDEKADRISIAGTPMIIMFYNQKLTPNDIRLTLL 246 Query: 242 LGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRW 301 + ++G+LCYY++ +R P R +M IKR +F++ YQPV T+ + GLE L+RW Sbjct: 247 GSLVLSLMIGVLCYYMLLLRQSPERALMRGIKRNEFFIEYQPVFHTKTGTIAGLEALIRW 306 Query: 302 RHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHL 361 +HP+ G IPPD FI +AES+ +IVPLT+HLF LIA DA L LP G K G+NI+P HL Sbjct: 307 QHPIEGRIPPDLFIPYAESEGLIVPLTRHLFRLIAEDAPRLATALPQGAKLGLNISPSHL 366 Query: 362 HSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTG 421 + SF D+ +LL LP ++F +V EITER M++E A F WLH G+EIAIDDFGTG Sbjct: 367 SAPSFHQDVYELLAQLPGNYFTLVFEITERGMVEEGNALAEFDWLHKQGIEIAIDDFGTG 426 Query: 422 HSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQA 481 HSALIYL+RF++DYLKIDRGF+N+IG +T+T+PVLDAV++LAK+L M TVAEGVET EQ Sbjct: 427 HSALIYLQRFSMDYLKIDRGFVNSIGRDTVTAPVLDAVISLAKKLKMQTVAEGVETAEQV 486 Query: 482 RWLSERGVNFMQGYWISRPLPLDDFVRW 509 +L E+ VNFMQGY+ S+PL +D+FV + Sbjct: 487 SFLQEQDVNFMQGYYYSKPLSIDNFVAF 514 >UniRef50_C9XWJ5 Protein rtn n=9 Tax=Enterobacteriaceae RepID=C9XWJ5_CROTZ Length = 520 Score = 549 bits (1416), Expect = e-155, Method: Composition-based stats. Identities = 285/511 (55%), Positives = 375/511 (73%) Query: 2 FIRAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADL 61 F + RK++L I G+ + ++++ + E +YD L D+ YL+TYFA L Sbjct: 7 FASTLSTPRKIILVGIATGLALTLMITLAARGWLHQQRENQYDMLARDIHHYLNTYFAQL 66 Query: 62 KSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELI 121 K++ D LQPLTL C + ELT+RAAF++NVR F+L++D +CSSATG++ +PL +L+ Sbjct: 67 KASADALQPLTLAECGAVSAELTSRAAFNVNVRAFLLIRDGVAYCSSATGKLHLPLRDLV 126 Query: 122 PALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQED 181 P +D K VD++I+PGTPM+P+KP+IV+W+ NPL++ G+ LN+NLTP L Y++RQ D Sbjct: 127 PDIDTRKTVDISIIPGTPMMPDKPSIVMWFGNPLMEGRGIVTTLNVNLTPYLIYTARQND 186 Query: 182 YDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFL 241 +G+AL+ + AL+TFS ++M +EL P+R + G PL + LY D D A L Sbjct: 187 LNGLALVAKDRALTTFSGKVMTPDELPAEPLRSESVQGYPLKLYLYGDTMPAEDRHLALL 246 Query: 242 LGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRW 301 LG + G + G L L+++R R GREI++AIKR QF+V YQPVVD ++ G+E L+RW Sbjct: 247 LGLLIGVLGGALTVILLALRARSGREILSAIKRNQFFVVYQPVVDAATRQIRGVEALMRW 306 Query: 302 RHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHL 361 HP AG IPPDAFI+FAE+Q +IVPLT HLF+LIA+D L++ LP G K GINIAP HL Sbjct: 307 EHPSAGMIPPDAFISFAEAQGLIVPLTHHLFKLIAQDVPRLQQSLPPGAKLGINIAPGHL 366 Query: 362 HSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTG 421 HSE FKADIQKL SLP +FQ+V EITERDM++E+EA LF WLH G EIA+DDFGTG Sbjct: 367 HSEQFKADIQKLHASLPPDYFQLVFEITERDMIREEEAMDLFTWLHEQGHEIAVDDFGTG 426 Query: 422 HSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQA 481 HSALIYLERFTLDYLKIDRGF+NAIGTETITSPVLDAV++LAKRLNM+TVAEGVET EQA Sbjct: 427 HSALIYLERFTLDYLKIDRGFVNAIGTETITSPVLDAVISLAKRLNMVTVAEGVETQEQA 486 Query: 482 RWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 +WL+ RGVNF+QGY+ SRP+ D +K+ Sbjct: 487 KWLTVRGVNFLQGYYFSRPVRAADLPASMKE 517 >UniRef50_B2VIJ7 Rtn protein n=9 Tax=Enterobacteriaceae RepID=B2VIJ7_ERWT9 Length = 539 Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats. Identities = 216/501 (43%), Positives = 322/501 (64%), Gaps = 1/501 (0%) Query: 10 RKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQ 69 R + L+ ++ + + + + V H+ ++ LI + Y+ +LK LQ Sbjct: 16 RVVFLSAGISFLSFLLFI-VISVAVTCHQRAEAHNQLIGQTRSYVIRVMDELKQILLPLQ 74 Query: 70 PLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKN 129 T D C + +L +AA + N+R +LV + FCSSA+G M+ ++++ P + NK Sbjct: 75 AETFDHCDRVRDDLAEQAASTPNIRYILLVNNNAAFCSSASGPMNNEIHQISPFTNDNKA 134 Query: 130 VDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALII 189 VD+ ++ G PM+ KPA+V+W RNP +GV A LNLN+TP L +S+Q + G+A++ Sbjct: 135 VDIRLVSGAPMLRGKPAMVLWLRNPTTPGNGVLATLNLNMTPYLLLASQQRENTGMAIVT 194 Query: 190 GNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV 249 G+TA++T++ +++N + L P+R I G P+ + Y + D+ + G + + Sbjct: 195 GDTAITTWNEQVINTDALPPNPLRRIAIPGYPMMLYFYGEILPERDLHIIIMAGLLVAVL 254 Query: 250 VGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEI 309 V +CY L +R+RPG+EIM I+R +F+V YQP++ T + GLE L+RW HP G + Sbjct: 255 VASICYVLFRLRLRPGKEIMQGIRRGEFHVEYQPIIATGSDTAYGLEALMRWVHPTEGRV 314 Query: 310 PPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKAD 369 P DAFI++AE Q +IVPLT+HLF LIARDA +L KV+PVG K GIN++P HL + F+ D Sbjct: 315 PADAFISYAEGQNLIVPLTRHLFALIARDAHQLCKVVPVGTKLGINLSPSHLTNPDFRKD 374 Query: 370 IQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLE 429 +++ L +P HF+ V EITER M+ E A ++F W+H ++IAIDDFGTGHSAL+YLE Sbjct: 375 VRQWLAMMPVDHFEYVFEITERTMVSESNADEMFDWIHQQNIKIAIDDFGTGHSALLYLE 434 Query: 430 RFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGV 489 +F DYLKIDRGF+ +IG +T+TSPVLD VLTLA+ L + TVAEGVET QA+WL RGV Sbjct: 435 KFHFDYLKIDRGFVQSIGMKTVTSPVLDTVLTLARELKLKTVAEGVETNAQAQWLINRGV 494 Query: 490 NFMQGYWISRPLPLDDFVRWL 510 +QGY+ SRPL + ++ Sbjct: 495 THLQGYFYSRPLGVQQLAKYF 515 >UniRef50_A4TND3 Membrane protein n=16 Tax=Enterobacteriaceae RepID=A4TND3_YERPP Length = 490 Score = 495 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 205/477 (42%), Positives = 309/477 (64%) Query: 33 LVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAFSMN 92 + + E K T ++ Y + ++ +T +L PL+ +C+QA+P L RAAF+ Sbjct: 2 SLLYRSSENKLTTQSGNIITYASHFLNEITTTMSQLIPLSTQSCEQASPTLHYRAAFTNG 61 Query: 93 VRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYR 152 VR F+LV++ +CSSATGEM P++ + P +++++ +D I GTPM+PNKPAI +W R Sbjct: 62 VRAFLLVREGVAYCSSATGEMHTPVSTIYPKVNLSQPLDFKIQQGTPMMPNKPAIAVWLR 121 Query: 153 NPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPV 212 ++G+ A + +L P L + G A+II A++TF S ++ +++L ++ Sbjct: 122 QAGRGDTGILATMEFSLHPYLLMGRSDNEMSGSAIIIDGLAITTFDSNVLPISQLPNLNA 181 Query: 213 RETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAI 272 RE + G P+ + +Y + T ND+ L G + +VG+L YY++ + EI+ I Sbjct: 182 REITLPGYPIKILIYHNSITKNDIRMTLLGGLLLAGLVGILAYYILITKKSAEAEILRGI 241 Query: 273 KREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLF 332 +R +F+V YQPV + ++GLE L+RW+HP G I PD FI +AE+Q +I PLT HLF Sbjct: 242 RRGEFFVEYQPVFRSHNQTISGLEALIRWQHPTEGRISPDIFIPYAETQHLIQPLTTHLF 301 Query: 333 ELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERD 392 ELI RD A + + P G K NI+P HL + F D+ +LL L F V EITER Sbjct: 302 ELIIRDTALMVNLFPTGAKLAFNISPAHLADDDFCQDVSRLLQQLNTDIFTPVFEITERG 361 Query: 393 MLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETIT 452 M++++ A + FAWLHS G++IA+DDFGTGHSALIYLERFTLDY+KIDRGFI+ IG T+T Sbjct: 362 MVQKELALKQFAWLHSQGIQIAVDDFGTGHSALIYLERFTLDYIKIDRGFISTIGENTVT 421 Query: 453 SPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRW 509 +PVLD+VL LAK+LN+ T+AEG+ET +Q +L++ GVN++QGY +S+PL ++ ++ Sbjct: 422 TPVLDSVLILAKKLNIETIAEGIETEQQLHYLAKHGVNYLQGYLLSKPLSVEALAKF 478 >UniRef50_B2VJL5 Putative uncharacterized protein rtn n=1 Tax=Erwinia tasmaniensis RepID=B2VJL5_ERWT9 Length = 523 Score = 474 bits (1220), Expect = e-132, Method: Composition-based stats. Identities = 151/519 (29%), Positives = 243/519 (46%), Gaps = 15/519 (2%) Query: 6 PNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTT 65 PN R L+ VAG++ +L F+ A + + + + T Sbjct: 7 PNHERLWLV---VAGLLPLLLCLFFTFIEARQTGARQQEMTAAALLSQAEHISDLAWDMT 63 Query: 66 DRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELI--PA 123 D LQ + C+ +L A + R+ L +D +CSSA G P+ +I Sbjct: 64 DSLQTFSNRPCKDIRSQLQKLGALNPYFRSVGLTQDNTVYCSSAFGATRGPVAGMIRHAL 123 Query: 124 LDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYD 183 ++ L GT V ++PA++ + P +G +A ++ L ++ + Sbjct: 124 PAPGQSWWTLSLAGTFGVQDRPAVIFMRQTP--GKTGSYAVVDGQYLIDLMRATGLKLGY 181 Query: 184 GVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLG 243 + + G ++ L + + P+ + + A W LL Sbjct: 182 HITMRFGGGYQIANAAPLNPQQANWKTRTFNSGSSHYPIAISISAPRTETLQNWRQVLLT 241 Query: 244 GMSGTVVGLLCYY-----LMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVL 298 M V+ + + + R E+ + +F V YQPV + ++ G+E L Sbjct: 242 FMPMAVILSVLFVAVTNSWLRRRSSYRDELRRGMAFGEFSVHYQPVCNLVNGQLAGVEAL 301 Query: 299 LRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAP 358 +RW+ + PD FI AE++ MIV LT+HL +LIA+D A + +P G GIN+A Sbjct: 302 MRWQRSDGSWVRPDIFIAAAEAEGMIVQLTRHLLQLIAKDCASWK--VPAGFHIGINVAA 359 Query: 359 DHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDD 417 DHL E F DI+ ++ I LE+TER ++ E + A L S G+ +AIDD Sbjct: 360 DHLQHEDFVKDIRGFSQNIAHLLPTITLELTERSLISEGDLVAHRLAELRSEGIRVAIDD 419 Query: 418 FGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVET 477 FGTGH +L YL+ F LDYLKID+ F+NAI + +P+LD ++ LA RL + VAEG+ET Sbjct: 420 FGTGHCSLTYLQTFPLDYLKIDKSFVNAIESADGETPILDTIIQLAHRLALQVVAEGIET 479 Query: 478 PEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTP 516 P Q +L GV F+QG++ +RPL + W+++ P Sbjct: 480 PLQMEYLKNHGVVFIQGFYYARPLSSAALMVWIEQNPPP 518 >UniRef50_A8GFM2 EAL domain protein n=2 Tax=Serratia RepID=A8GFM2_SERP5 Length = 538 Score = 466 bits (1201), Expect = e-130, Method: Composition-based stats. Identities = 154/510 (30%), Positives = 247/510 (48%), Gaps = 11/510 (2%) Query: 8 FGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDR 67 + L G+ I +L ++ E L T ++ K +R Sbjct: 11 YRYYRWLLAGAVGLAILLLSLYTRYYQEIGTIEQNRQVLATRTVAKINDLLTPAKQQAER 70 Query: 68 LQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDIN 127 PL TC++ P L RAA + +R +LVKD +CSS G + ++P++ N Sbjct: 71 SMPLLGSTCEEVMPTLRFRAAQNQALRAMLLVKDGVIYCSSLFGTRKYLFSTILPSV-AN 129 Query: 128 KNVDMAILPGTPMVPNKPAIVIWY-RNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVA 186 + + P + P +++W P ++GV N+ L + ++ V Sbjct: 130 DGAKLVLRPSLSVAKGVPTLIMWTPAQPDNNSNGVLHVFNIELLANFLLEPQEPYAQRVV 189 Query: 187 LIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLY---ADDWTWNDVWYAFLLG 243 L +GN +L ++ + LT K P ++ L+ A + L Sbjct: 190 LNVGNYSLEYGRREILRSDTLTTDLRYTAKSTRYPFSISLFGPQASMLALAALPRHIPLS 249 Query: 244 GMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRH 303 + + + Y L + RM I AI R +F V QP+++ + R G+E+LLRW++ Sbjct: 250 LLISLLAAYVVYLLTANRMSLSYHIGHAISRREFRVYCQPIINAETGRCVGVEMLLRWKN 309 Query: 304 PVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHS 363 G I PD FI AE +I+ LT++L + + IN+A +H + Sbjct: 310 KRQGWISPDVFIPLAEQHGLIIALTRYLMSTVVENLQLFPPR--PSFYISINVAAEHFNG 367 Query: 364 ESFKADIQKLLTSLPAHHF-QIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGH 422 + DI++L LPAH ++LE+TER L E + + L +G+ +AIDDFGTGH Sbjct: 368 VTIIDDIRRLW--LPAHPMPSLMLELTERTALSEIQ-YEQIKTLKEMGIMLAIDDFGTGH 424 Query: 423 SALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQAR 482 S+L YL++ + D LKIDRGF AIGT+ I + V D ++TLA RL + VAEGVET EQA Sbjct: 425 SSLSYLKKLSPDVLKIDRGFTAAIGTDAINATVTDTIITLAHRLKLKLVAEGVETAEQAD 484 Query: 483 WLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 +L R VN +QG++ ++P+P++ F WL++ Sbjct: 485 YLRSRDVNALQGFYFAKPMPINVFPLWLQQ 514 >UniRef50_A0KNV8 Rtn protein n=9 Tax=Gammaproteobacteria RepID=A0KNV8_AERHH Length = 510 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 153/480 (31%), Positives = 237/480 (49%), Gaps = 17/480 (3%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLV 99 + + + ++ L+ +Q C++ L + A +VRT L Sbjct: 42 KQDAEERLLHAREMLERTLDHAHQAAAMVQGSVGRPCEEVVQGLRDQVATVPDVRTVNLA 101 Query: 100 KDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNS 159 K + +CSS G P L N + ++ G P+ P +P +V YR P+ + S Sbjct: 102 KGEVVYCSSLYGPYQGPFK-----LADYANGQLDLMRGNPVTPGRPLVV--YRQPVGEYS 154 Query: 160 GVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAG 219 + L L SR + L+IG ++ V + + +T Sbjct: 155 VLVGIDGYYLHNILDMLSRN---SPLTLVIGAQSMLADGQIHDEVPPVALGSLEQTS-GK 210 Query: 220 IPLTVR--LYADDW---TWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKR 274 P V L D++ WN + ++ + G + G L Y+L P +E+ A+ + Sbjct: 211 YPFRVVTDLSHDEYGSHIWNYSRASLIIYPLLGLLAGCLVYWLAGRSTSPSQELRRALDQ 270 Query: 275 EQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFEL 334 +F QPVV +G EVL+RW+HP G I PD FI AE +IVP+T+ L E Sbjct: 271 REFIPYLQPVVTGDDAHWSGCEVLMRWQHPRQGLISPDRFIPLAEDSGLIVPMTRLLMEQ 330 Query: 335 IARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDML 394 + A LP G FG NI+ H S D + + + + ++VLE+TER+++ Sbjct: 331 VREQFAGRVHSLPRGFHFGFNISASHCKDMSLLEDCRDFINAFRENPIKLVLELTERELI 390 Query: 395 KEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITS 453 E T +LFA LH +GV IAIDDFGTGHS+L YL++F +D+LKID+ F+ IG++ ++S Sbjct: 391 VADETTDRLFAELHQLGVFIAIDDFGTGHSSLTYLQQFQVDFLKIDQSFVGMIGSDALSS 450 Query: 454 PVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKP 513 +++ V+ LA RL +L VAEGVE QA +L R VNF+QGY RP+P+ +F L + Sbjct: 451 HIVENVIDLATRLGLLLVAEGVENEVQAAYLRARQVNFLQGYLYGRPMPMKEFAGLLAQG 510 >UniRef50_P76261 Uncharacterized protein yoaD n=124 Tax=Enterobacteriaceae RepID=YOAD_ECOLI Length = 532 Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats. Identities = 145/517 (28%), Positives = 253/517 (48%), Gaps = 14/517 (2%) Query: 6 PNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTT 65 + R ++ C + ++ ++F+ + ++ + + LD L++ + Sbjct: 9 KTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGS 68 Query: 66 DRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALD 125 + L PL C A+ L +AA VR+ LV+D +CSS G ++P+ +++ L Sbjct: 69 EVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELP 128 Query: 126 INKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGV 185 + + + + ++ P ++ W N+GV +N++L ++ + Sbjct: 129 APQPL-LRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSA 187 Query: 186 ALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWT---WNDVWYAFLL 242 +L + L + + ++ + D + P T+ + T W+ + L Sbjct: 188 SLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPL 247 Query: 243 GGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWR 302 + +VG + + + RM REI + + +F + QP+++ ++ + G+E+LLRW Sbjct: 248 AVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWN 307 Query: 303 HPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLP--VGVKFGINIAPDH 360 +P G I PD FI AE +IVPLT+++ R V P GIN+AP H Sbjct: 308 NPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQ----RHVFPMSSQFHVGINVAPSH 363 Query: 361 LHSESFKADIQKLLTSLPAHH-FQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFG 419 D+ + AH Q++LEITERD L + + ++ LH V++AIDDFG Sbjct: 364 FRRGVLIKDLNQYW--FSAHPIQQLILEITERDALLDVD-YRIARELHRKNVKLAIDDFG 420 Query: 420 TGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPE 479 TG+S+ +LE D LKID+ F AIG++ + S V D ++ L +RLN+ VAEGVET E Sbjct: 421 TGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQE 480 Query: 480 QARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTP 516 QA++L GV+ +QGY ++P+PL DF +WL P Sbjct: 481 QAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPP 517 >UniRef50_D0GSB3 Rtn protein n=6 Tax=Vibrio RepID=D0GSB3_VIBMI Length = 528 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 147/497 (29%), Positives = 247/497 (49%), Gaps = 25/497 (5%) Query: 20 GVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQA 79 ++I +L+ Q K++++ + + LD+ + +R P +C A Sbjct: 23 PLVIGLLLISWQTSHD-LKNDIRDNLKAGNAL--LDSLVQHAEIANERAAPYLRMSCDNA 79 Query: 80 NPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTP 139 P L A + +VR+ L ++ K +C S G+ P+NE A + ++ +L G Sbjct: 80 QPYLADLVAITPDVRSIHLSENNKIYCDSLGGKGIRPINESFSA-----DEELLLLQGNK 134 Query: 140 MVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSS 199 + PN A++ VF+ ++ ++ S + Y +L IG F+ Sbjct: 135 LSPNHSALIFLR---DYDEGTVFSGVSSYYLRNIL--SLIKSYGNTSLHIGERW---FNE 186 Query: 200 RLMNVNELTDMPVRETKIAGIPLTVRLY-----ADDWTWNDVWYAFLLGGMSGTVVGLLC 254 R + + + + + P ++ D+ + + LL + VG Sbjct: 187 RGVVTHRSKPTTIEQNSLK-YPYSLSTSLTMEDYWDYFIDAKHTSLLLLLVMSFGVGGYA 245 Query: 255 YYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAF 314 ++ EI AI+ ++F QP++D R+ EVL+RW+HP AG I PD F Sbjct: 246 FWRQGQINALDPEIRRAIRAQEFEPYIQPIMDIH-GRMASAEVLMRWQHPSAGLIRPDLF 304 Query: 315 INFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLL 374 I AE +IVP+T + + + +P NI+ H + D Q L Sbjct: 305 IPLAEESGLIVPMTSQVMAKVRDQLGPYQSKIPSDFHISFNISAKHCVNSDLVKDCQHFL 364 Query: 375 TSLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTL 433 ++ H + LE+TER+++++ +EA +LFA L+ +GV +AIDDFGTGHS+L YL+ F Sbjct: 365 SAFN-HPSLLSLELTERELIEDTEEARKLFAKLNQIGVRLAIDDFGTGHSSLNYLQTFQF 423 Query: 434 DYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQ 493 D LKID+ F+ IG+ + S ++D +L LA+RLNM TVAEG+ET EQ + + RGV++MQ Sbjct: 424 DVLKIDQSFVRMIGSNAVASHIVDTLLNLAQRLNMQTVAEGIETEEQVTYFAARGVDYMQ 483 Query: 494 GYWISRPLPLDDFVRWL 510 GY+ + P+P+DDF+ L Sbjct: 484 GYFYASPMPMDDFLTHL 500 >UniRef50_A4SI84 EAL domain protein n=3 Tax=Gammaproteobacteria RepID=A4SI84_AERS4 Length = 527 Score = 461 bits (1186), Expect = e-128, Method: Composition-based stats. Identities = 140/511 (27%), Positives = 244/511 (47%), Gaps = 16/511 (3%) Query: 2 FIRAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADL 61 F + L ++ ++ ++ + E ++ Sbjct: 4 FYIDLSRRWLRLCCALMVFILPLLVGGWATHKSYMEELESGSAAAAHKAMTLMENMLDHA 63 Query: 62 KSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELI 121 + ++ PL C + N +L + A VR+ LVK+ +C+S G + +++ Sbjct: 64 ERANRQVLPLVGAPCDEINFQLREQVALVPFVRSVNLVKEGMLYCTSLFGSV-REVDDAS 122 Query: 122 PALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQED 181 P + + ++ G + N P +++ R+ +N+ + A L+ L S + Sbjct: 123 PYI----ARKLLLMRGNQVRANHPLLIV--RSEQGRNAALSAIDGEYLSVMLTLSHHAGN 176 Query: 182 YDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRL-YADDWTWNDVW--Y 238 + + +G+T L +L + E P ++ Y W+ +W Sbjct: 177 ---LFMRVGSTWFDEAGHYLDKAPDLHALARTELTSPHYPFSIHAGYVTLAYWHSLWDHK 233 Query: 239 AFLLGGMSGT--VVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLE 296 + +L + G LL ++L+ P E+ A++ ++F QP+V T R+ G+E Sbjct: 234 SLILSLLCGLSLAFALLVWWLLGRPGSPVGELRRALRAKEFEPYLQPLVTTSDTRLMGVE 293 Query: 297 VLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINI 356 VL+RW+HP +G I PD FI AE +IVP+T + + +A+ + + LP G NI Sbjct: 294 VLMRWQHPNSGLIRPDLFIPQAEESGLIVPMTTLIMKKVAQVLSREQARLPDGFHISFNI 353 Query: 357 APDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLK-EQEATQLFAWLHSVGVEIAI 415 + H + + + L +VLE+TER++L + LF L +GV++AI Sbjct: 354 SAAHCRDLALLQECRTFLAQFAPGKIVLVLELTERELLVVDPNTLSLFRQLDQMGVKLAI 413 Query: 416 DDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGV 475 DDFGTGHS+L YL++F +DYLKID+ FI IGTE+++ ++ V+ L RL +L +AEGV Sbjct: 414 DDFGTGHSSLFYLQQFHVDYLKIDQSFIGRIGTESLSEHIVANVIDLGARLGLLLIAEGV 473 Query: 476 ETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 E+ QA +L +GV++MQGY RP+PL F Sbjct: 474 ESELQAAYLRAKGVDYMQGYLFGRPMPLQHF 504 >UniRef50_C6DJC0 EAL domain protein n=4 Tax=Pectobacterium RepID=C6DJC0_PECCP Length = 535 Score = 458 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 147/506 (29%), Positives = 246/506 (48%), Gaps = 12/506 (2%) Query: 13 LLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLT 72 LL +VAG++ +L F+ + + ++ + + A DRLQ Sbjct: 12 LLQLLVAGILPLLLGLLFTFVESRLMVKRDLESTAQIAMNHAENISAQAWKMVDRLQRFH 71 Query: 73 LDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELI--PALDINKNV 130 C EL + R ++ + +CSS G P++ +I P + Sbjct: 72 GQPCNIIGDELQRLGSVFSYFRAIGVIHNTNVYCSSTFGSTLTPISRVIQQPLPETYSER 131 Query: 131 DMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIG 190 + G+ V +PA++ + + PL + G +A ++ L + + + L + Sbjct: 132 WSLSIAGSDNVKERPALI-FVQMPLTGD-GAYAMVDAQYLIDLMIAISKIRGYQLTLKMD 189 Query: 191 NTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADD----WTWNDVWYAFL-LGGM 245 N + L E + + P+T+ + A W ++ FL L + Sbjct: 190 NGHPIQTGPAITPRIGLFSTSALEIRSSRFPITLNITAPASQEIANWKQAFFTFLPLAII 249 Query: 246 SGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPV 305 + +Y ++ EI I +F V YQP+ D ++ TG+E LLRWR Sbjct: 250 LSLLFTTAIWYWQKRKLLFRDEIRKGIANGEFSVYYQPIYDAESQTCTGVETLLRWRRSN 309 Query: 306 AGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSES 365 I PD FI+ AE++ MI+P+T+HLF+L+A D A + G G+N+A +HLH S Sbjct: 310 GKWIRPDIFISAAEAESMIIPITRHLFDLVASDIASWQVK--PGFHLGLNVAAEHLHHPS 367 Query: 366 FKADIQKLLTSLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSA 424 F +D+ + + +H I LE+TER+++ E Q L G I IDDFGTGH + Sbjct: 368 FVSDVHRFAEKVASHSLSISLELTERNLISNGPEIIQRLHQLREDGFMITIDDFGTGHCS 427 Query: 425 LIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWL 484 L YL+ F LD LKID+GF++AI + +P+LDA++ L+ R+N+ +VAEGVET +Q +L Sbjct: 428 LSYLQNFPLDCLKIDQGFVSAISSPDEEAPILDAIINLSHRINLQSVAEGVETKQQLMYL 487 Query: 485 SERGVNFMQGYWISRPLPLDDFVRWL 510 + GV ++QG+ ++P+ + F+ WL Sbjct: 488 QQHGVKYIQGFLYAKPMDNESFLVWL 513 >UniRef50_A6AJG8 Rtn protein n=1 Tax=Vibrio harveyi HY01 RepID=A6AJG8_VIBHA Length = 501 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 143/513 (27%), Positives = 241/513 (46%), Gaps = 30/513 (5%) Query: 10 RKLLLTCIVAGVMIAI-LVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRL 68 +++LL IV ++I+I V Q + EV+ + + +D + + R Sbjct: 8 KRILLAFIVLILLISIGSVGVYQLSKSNLHREVRSSLEVG--KSLMDKLVKNADVASQRA 65 Query: 69 QPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINK 128 P T C+QA P L +V+ L KD FC S G+ D ++P Sbjct: 66 LPYTKMECEQALPYLRDLVVTIPDVQMIALAKDNHVFCGSLVGKRDY----IVPNYHF-S 120 Query: 129 NVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALI 188 + ++ P PN PA++ N+GV +++ ++ + L Sbjct: 121 GDKLFLVSSLPDKPNTPALIF---KNETGNTGVGVSVSGYYLKNIL---------SLTLK 168 Query: 189 IGNTALSTFSSRLMNVNELTDMP---VRETKIAGIPLT--VRLYADD---WTWNDVWYAF 240 +T L + +++D P + + P V L+ DD + + Sbjct: 169 DLDTYLQVGEKWINKAGQISDQPLPVTIQVESKDYPYRLQVSLFHDDYMNYLLSHKRSTI 228 Query: 241 LLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLR 300 + + + L + ++ A+ +F QP VD + + G EVL+R Sbjct: 229 FIIILFALSMSWLIFVATGQTPSMEDKLRQALANNEFVPYVQPYVD-KTNKFVGFEVLVR 287 Query: 301 WRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDH 360 W P G I PD FI AE +I+P+T+ L ++ + A + LP NI+ H Sbjct: 288 WLSPKEGLIRPDLFIPLAEDSGLIIPMTKSLMLQVSNELAACSQSLPPDFSVAFNISAKH 347 Query: 361 LHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFG 419 + D + L+S P Q+ LE+TER+++++ EA LF L V +AIDDFG Sbjct: 348 CVNSELLEDSLEFLSSFPEKKVQLCLELTERELVRDTDEARALFHSLSEHDVSLAIDDFG 407 Query: 420 TGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPE 479 TGHS+L YL +F D LKID+ F+ IG +++++ +++ +L LA RL M T+AEGVET E Sbjct: 408 TGHSSLSYLRQFRFDILKIDQSFVQMIGNDSVSAHIVENLLDLASRLGMKTIAEGVETAE 467 Query: 480 QARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 QA +L ++ +QGY+ ++P+PL DF++ L++ Sbjct: 468 QAEYLRSHNIDCLQGYYFAKPMPLKDFIQQLEQ 500 >UniRef50_C8QG51 EAL domain protein n=3 Tax=Enterobacteriaceae RepID=C8QG51_9ENTR Length = 534 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 146/522 (27%), Positives = 236/522 (45%), Gaps = 16/522 (3%) Query: 4 RAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKS 63 R +FG L++ + +++ IL + ++ H+ ++ + + Sbjct: 6 RNRDFGWLLIVCAGLLPLVLGILCTAIEARHTVHQQQIN---TANSLLAQAERMSDSAWD 62 Query: 64 TTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELI-- 121 L+ C +L + R+ ++ CSSA G L+E+I Sbjct: 63 MITDLRQFHYQPCSAIEGKLQREGNLNAYFRSIGKLEGDNVTCSSAYGMYPGTLSEMILR 122 Query: 122 PALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQED 181 K L GT VP++PA++ + P + G +A ++ + + Sbjct: 123 QPPVTGKAWWSISLRGTYGVPDRPAVIFVRQLPDGE--GFWAVIDGQYLMDFMRALGESR 180 Query: 182 YDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYA-- 239 + + + A T + + + P++V + W Sbjct: 181 NYHMTMRFNDGAPITSGPVEVQPEIWLKSEPLLAQSSRYPISVEVVVPPSELLKAWRQAL 240 Query: 240 ---FLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLE 296 + + ++ +L + R+ EI A++ QF V YQPV G+E Sbjct: 241 FIFLPMAAIFSILLMILTANWLRRRISWRDEIRRAMRNRQFSVHYQPVYSVAEQHCNGVE 300 Query: 297 VLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINI 356 LLRW P I PD FI+ AE + MIVPLT+HL EL+A D + + G G+N+ Sbjct: 301 ALLRWHLPNGDTIRPDIFISAAEEEGMIVPLTRHLLELMAEDIQSWQ--VAPGFHIGLNL 358 Query: 357 APDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAI 415 A +HL F DI+ + QI LE+TER ++ + ++ + L S G+ +AI Sbjct: 359 AAEHLQHPDFVKDIELFARRVQDKKLQITLELTERSLIHDGEDVARKLRLLQSQGMRVAI 418 Query: 416 DDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGV 475 DDFGTGH +L YL F LDYLKIDRGFINAI +PVLDA++ LA++L + + EGV Sbjct: 419 DDFGTGHCSLSYLLTFPLDYLKIDRGFINAIERLDGETPVLDAIINLARKLQLEVLGEGV 478 Query: 476 ETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL-KKPYTP 516 ET Q ++L +RGV F+QGY+ + P+ D WL ++ P Sbjct: 479 ETSLQFQYLQQRGVLFIQGYYYAWPMDNDRLRTWLNEQGQQP 520 >UniRef50_A5W2V7 Diguanylate phosphodiesterase n=16 Tax=Pseudomonas RepID=A5W2V7_PSEP1 Length = 528 Score = 444 bits (1142), Expect = e-123, Method: Composition-based stats. Identities = 146/524 (27%), Positives = 243/524 (46%), Gaps = 24/524 (4%) Query: 4 RAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWH-KHEVKYDTLIT--DVQKYLDTYFAD 60 R + LL V+ + V C ++ W + E++ + T ++++ + Sbjct: 7 RRAALSWRTLL----PWVVGLLPVMCGLAVMNWQVEREMQASSHATTRQALEHVEHILDN 62 Query: 61 LKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNEL 120 L + L PLT +C+QA L A+ + VR+ L + +C+S GE D P+N Sbjct: 63 LSRAANSLLPLTDSSCEQAQLMLRAQVTRNAFVRSTNLFRHNNLYCTSLFGEFDEPVN-- 120 Query: 121 IPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQE 180 + + ++ G + P P +V YR + + +L +L E Sbjct: 121 ---PGDYVDGKLWLMDGNSVTPGHPLLV--YRASDGDHGAITTVDGDHLLTALRLIGPDE 175 Query: 181 DYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAF 240 + + +G+ + V+ P +V+ + + Sbjct: 176 ELQ---IRVGDAWMGKDGVVHKGVSPAAPSANVLIGSTRYPFSVQGGYSADKQGQLLRSH 232 Query: 241 LLGGMSGTVVGLL-----CYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGL 295 G +S +V C + + P E+ A++ ++F +QPVV R G Sbjct: 233 YPGLLSLLLVLGALAALACRWQIRRATSPRAELDRALQADEFLPYFQPVVRKGDYRWAGA 292 Query: 296 EVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGIN 355 EVL+RW HP G + PD FI +AE IV +T+ L A+ A +L G G+N Sbjct: 293 EVLMRWHHPREGLVRPDLFIPYAEHSGQIVAMTRALLTHTAQSLAPYAGLLEDGFHIGVN 352 Query: 356 IAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIA 414 I DH S D + L P + LE+TER +++ T +LF LH++GV IA Sbjct: 353 ITADHCRDLSLLDDCRTFLQHFPPGRVVLTLELTERKLIEPTPVTLELFEKLHAMGVMIA 412 Query: 415 IDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEG 474 +DDFGTG S+L YL +F +DYLKID+ F+ IG + ++ +L++++ L+ +L++ VAEG Sbjct: 413 LDDFGTGQSSLNYLRQFKVDYLKIDQSFVAMIGADALSVHILESIIELSGKLDLGIVAEG 472 Query: 475 VETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK-KPYTPQ 517 VET Q +L++ GV+F QGY +RP+P F+ L +P Q Sbjct: 473 VETDLQRDYLAKHGVDFQQGYLFARPMPAAQFLAALATRPGATQ 516 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 443 bits (1141), Expect = e-123, Method: Composition-based stats. Identities = 91/334 (27%), Positives = 160/334 (47%), Gaps = 10/334 (2%) Query: 188 IIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS- 246 + + R+M+ + V +Y +D + M Sbjct: 609 RVDAGLSTGIVQRIMDGIAQPLTIEGHEFFISSSIGVAVYPNDGVTPEELIKHADIAMYR 668 Query: 247 --GTVVGLLCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVL 298 T +Y S+ R+R ++ A++R +F + YQP +D + ++ G+E L Sbjct: 669 AKETGRNNFQFYTSSMNERALERLRLEGDLRNAMERGEFILHYQPQLDLRTGKIVGVEAL 728 Query: 299 LRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAP 358 +RW+HP G IPP FI AE +IVP+ + R ++ ++ +N++ Sbjct: 729 IRWQHPELGMIPPMRFIGLAEETGLIVPIGAWVIREACRQNKVWQEHGLGSLRMSVNLSA 788 Query: 359 DHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDD 417 + I L + +E+TE ++ + + A + L ++GV+++IDD Sbjct: 789 RQFAQQDLLESIALALEETQLPPQCLEIELTESLVMADVDHAIGILRELKALGVQLSIDD 848 Query: 418 FGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVET 477 FGTG+S+L YL+RF +D LKIDR F+N I T+ + ++ ++++LA L + +AEGVET Sbjct: 849 FGTGYSSLSYLKRFPIDVLKIDRSFVNDITTDPDDAAIVASIISLAHSLRLTVIAEGVET 908 Query: 478 PEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 EQ +L + + +QGY+ SRP+ D LK Sbjct: 909 EEQLAYLQQHDCDQIQGYFFSRPITADAMEVMLK 942 >UniRef50_C6C3R8 Diguanylate phosphodiesterase n=1 Tax=Dickeya dadantii Ech703 RepID=C6C3R8_DICDC Length = 500 Score = 443 bits (1140), Expect = e-123, Method: Composition-based stats. Identities = 153/508 (30%), Positives = 246/508 (48%), Gaps = 21/508 (4%) Query: 14 LTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTL 73 L I+ + + + + + + ++T F D + + + L Sbjct: 4 LIAILTFLAMLAIGCGAIYYHNYQSDIQDANVSAVKAVNDIETIFNDAQRVVNLGKTLLT 63 Query: 74 DTCQ-QANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDM 132 C +L AA +RT LV++ +CSS G + P AL+ + Sbjct: 64 VPCDTVVIRKLNMLAAIENYLRTISLVRNDIVYCSSLFGVDNRP-----AALERFYKGQL 118 Query: 133 AILPGTPMVPNKPAIVIWYRNPLLKNSGVFA-ALNLNLTPSLFYSSRQEDYDGVALIIGN 191 A+LPG + PNKP ++ +N V A ++L L S+Q D + L +G Sbjct: 119 ALLPGNSVTPNKPLVMY---METTENGSVAAGIHGIHLFNILNSLSKQRD---LYLRVGA 172 Query: 192 TALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADD-WTWNDVW----YAFLLGGMS 246 T LS + +E T E ++ DD +T D W L+ + Sbjct: 173 TWLSR-DGMVAPFDERTLPNYVEVPSRHYYFSILYTVDDNYTLVDFWDQEKMTLLIVFLI 231 Query: 247 GTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVA 306 G+L Y S P + AI+ ++ YQPV+ TQ+ + G EVL RW HP Sbjct: 232 ALGSGMLAYKYTSRITSPVEALKRAIRNQEIVPFYQPVISTQSRELYGFEVLARWYHPKT 291 Query: 307 GEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESF 366 G I PD FI +E +I+PLT+ L E + D + +LP + GINI+ H E F Sbjct: 292 GFISPDVFIPLSEQSGLIIPLTRLLMERVINDLISCQDILPEDLHIGINISAKHCQYEGF 351 Query: 367 KADIQKLLTSLPAHHFQIVLEITERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTGHSAL 425 D + + +L ++++EITER+ ++ + F L + G+ IA+DDFGTG+S Sbjct: 352 IDDCKYFIDALGTRKIRLMVEITEREKIEITPTTLRFFQNLKAAGILIALDDFGTGYSNF 411 Query: 426 IYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLS 485 YL + D +KID+ FI+ I + ++P+++ V+ LA+ +N+ T+AEGVET QA +LS Sbjct: 412 DYLRQLQADLIKIDQSFISMIDENSQSTPLVNCVIDLAQNMNLKTIAEGVETEFQAEFLS 471 Query: 486 ERGVNFMQGYWISRPLPLDDFVR-WLKK 512 E+ ++++QGY SRPLP D+ V+ WL+K Sbjct: 472 EKNIDYLQGYLFSRPLPFDECVKTWLQK 499 >UniRef50_C6CFE9 Diguanylate phosphodiesterase n=2 Tax=Dickeya RepID=C6CFE9_DICZE Length = 501 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 147/509 (28%), Positives = 251/509 (49%), Gaps = 22/509 (4%) Query: 14 LTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTL 73 L ++ V + + + + K ++ + K+ + +PL Sbjct: 4 LIALLTFVAMFAMGLWAIYYQDYRADRQGAYANAERAVKNIEEILDEAKNAVEDSKPLLA 63 Query: 74 DTC-QQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDM 132 +C + +L AA + ++RT L+K +CSS G + P AL+ ++ Sbjct: 64 LSCTPEVIRQLNMTAAVASHLRTVSLIKRDVVYCSSLYGVDNRP-----AALERFHMREL 118 Query: 133 AILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNT 192 A+L G + P++ ++++ N + GV A +LT L S++ + + L++GNT Sbjct: 119 ALLAGNSVTPDR-TLIMYLGNTAYGSVGV-AIHGQHLTSVLDLLSKRRN---LYLLVGNT 173 Query: 193 ALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYA--DDWTWNDVWY----AFLLGGMS 246 +S + ++ TD+P +G LY+ + ++ D WY FL+ + Sbjct: 174 WISRENQ--VSTFNPTDLPNFVIIPSGHYHFSILYSLNEKYSLADFWYKEKMTFLIVFLI 231 Query: 247 GTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVA 306 G L Y + P I AI+ ++ YQPV+ T + + G+EVL RW HP + Sbjct: 232 ALGSGFLAYKYSTRINSPYDGIRRAIENQEVLPYYQPVISTVSREIYGVEVLARWHHPKS 291 Query: 307 GEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESF 366 G I PD FI E +I+P+T+ L + RD LP + INI+ H S+ F Sbjct: 292 GFISPDIFIPLCEQSGLIIPMTRSLMSSVVRDLTPHLNTLPDNLHIAINISAQHCQSDDF 351 Query: 367 KADIQKLLTSLPAHHFQIVLEITERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTGHSAL 425 D Q + + + +++EITER+ + E F L GV IA+DDFGTG+S Sbjct: 352 ITDCQNFIAAFGDKNVHLMIEITEREKVDITPETIGFFKKLSDAGVLIALDDFGTGYSNF 411 Query: 426 IYLERFTLDYLKIDRGFINAI-GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWL 484 YL + ++ +KID+ F++ I + +S +++ V+ LA+++ ++T+AEGVET Q +L Sbjct: 412 DYLRKLHVNVIKIDQSFVSMIDENDPQSSTLVNCVIDLAQQMKLMTIAEGVETEFQTEFL 471 Query: 485 SERGVNFMQGYWISRPLPLDDFVR-WLKK 512 S + +NFMQGY+ SRPLP D+ + WL K Sbjct: 472 SRKHINFMQGYFFSRPLPFDELAQTWLNK 500 >UniRef50_A6V3S1 Aminoglycoside response regulator n=3 Tax=Proteobacteria RepID=A6V3S1_PSEA7 Length = 526 Score = 439 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 144/513 (28%), Positives = 250/513 (48%), Gaps = 21/513 (4%) Query: 9 GRKLLLTCIVAGV---MIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTT 65 R+ L + ++ +L++ L F A + + + V + LDT + + Sbjct: 7 RRERLFHFGIVFAALAIVPLLMAPLVFQQARMRADGEAAVTSVAVLRQLDTLLGVVSGSL 66 Query: 66 DRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEM-DIPLNELIPAL 124 DR Q C + LT S R+ VLV+ +CSS GE+ D+PL AL Sbjct: 67 DRSQGALGKPCAEVLGRLTRMTMLSPYFRSLVLVERGNVYCSSLQGELKDLPLPVAFKAL 126 Query: 125 -DINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYD 183 + + TP VP + ++++ + SGV A ++ + ++ + Sbjct: 127 GSLAPGQRITPSNATPQVPERASVIMSRGDA--NGSGVLAIIDGQYLLDIQQAASYDGRF 184 Query: 184 GVALIIG------NTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVW 237 V +++ + + PV E ++A P Y D + Sbjct: 185 QVQMVLRESQRQLPGGMPATQDGGGAIAASARFPV-EVRVAVAPALASAYRADAWRHYTP 243 Query: 238 YAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEV 297 + L ++G + L C R+ ++ A++ +F++ YQP++ G+E Sbjct: 244 FIVLAAMLAGYLAHLFC----RRRLSLVGDMYRAMRAREFHMVYQPIIRLDTGECRGVEA 299 Query: 298 LLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIA 357 L+RWR P ++ PD F+ AE MI LT+H+F L+A D A+L L G G+N++ Sbjct: 300 LVRWRRPDNSQVRPDIFVPLAEDNGMIGDLTRHIFGLVAADLAQL--GLGAGDHLGVNVS 357 Query: 358 PDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDML-KEQEATQLFAWLHSVGVEIAID 416 HL + F D+++LL ++ + Q+VLE+TER+ L ++ +A + L +GV+ A+D Sbjct: 358 GSHLAGQGFVDDVRRLLGAIGSDGPQLVLEVTEREALPRDAQAQRNIRQLRELGVQWALD 417 Query: 417 DFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVE 476 DFGTG S+L YL++ D+LK+DR F++ +GTE++ + VL+ ++ LA+RL++ AEG+E Sbjct: 418 DFGTGQSSLSYLQQLHADFLKVDRSFVSGVGTESVNAVVLETIIGLAQRLDLDVTAEGIE 477 Query: 477 TPEQARWLSERGVNFMQGYWISRPLPLDDFVRW 509 T EQ ++L V + QGY S PL + W Sbjct: 478 TREQEQYLCGHSVQWGQGYLFSPPLTAAELGAW 510 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 92/348 (26%), Positives = 156/348 (44%), Gaps = 10/348 (2%) Query: 171 PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADD 230 ++ E + I S + ++++ + + + LY DD Sbjct: 589 DTIARIGGDEFTILLHNITRAENASIVADKIIDTLANPWIIGNHEFHITTSIGIALYPDD 648 Query: 231 WTWNDVWYAFLLGGMS-GTVVGLLCYYLMS--------VRMRPGREIMTAIKREQFYVAY 281 T + M +G Y + R + A+ R++F + Y Sbjct: 649 GTDAESLLKNADAAMYQAKEMGRNNYQFYTPTMNAQTLRRFELENNLRRALDRKEFVIYY 708 Query: 282 QPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAE 341 QP V+ ++ G+E L+RW+HP G I P FI AE +I+P+ + + Sbjct: 709 QPQVEIHTGKIVGVEALIRWQHPQRGMISPAEFIPMAEETGLIIPIGEWILRRACAQNKA 768 Query: 342 LEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQ 401 + ++ +N++ I +L + LEITE +K+ T+ Sbjct: 769 WQDRGFSPMRVTVNLSARQFLQPHLPQYISNVLEDTGLGPQWLELEITESLAMKDVAFTE 828 Query: 402 -LFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVL 460 L +G+ +AIDDFGTG+S+L YL+R +D LKIDR FI+ + TE+ ++ A++ Sbjct: 829 KTLIELRKMGITLAIDDFGTGYSSLNYLKRLPIDILKIDRSFIHDLNTESDDVAIISAII 888 Query: 461 TLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVR 508 TL L M VAEGVET EQ +L ++ + MQGY ++PLP+ + + Sbjct: 889 TLGHNLKMKVVAEGVETKEQLMFLRQQQCDLMQGYLFTKPLPVRELEQ 936 >UniRef50_C6UPQ0 Predicted protein n=10 Tax=Enterobacteriaceae RepID=C6UPQ0_ECO5T Length = 536 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 158/512 (30%), Positives = 254/512 (49%), Gaps = 22/512 (4%) Query: 8 FGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITD--VQKYLDTYFADLKSTT 65 F +K+ + I+ G++ +L A ++ DT IT + K LD +K TT Sbjct: 35 FNKKMFVLIIIPGILGVLL------SFAMSVFQMNRDTTITAGILLKQLDNVTQIVKHTT 88 Query: 66 DRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALD 125 L + C+ +L A A + VRT L+++ CSS +G + +N++ Sbjct: 89 KLTSILVMKPCKDILEQLIANGALTPYVRTTGLIENNFQICSSVSGFKKMNVNDVYGTSF 148 Query: 126 INKNVDMAI--LPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYD 183 NKN + I + GT VP K AIV + P+ + F+ + L E+ D Sbjct: 149 HNKNKESRIVSISGTSFVPGKTAIV--FLMPIGNDMTAFSIVESRYIYDLMDVLDDENDD 206 Query: 184 GVALIIGNTALSTF----SSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYA 239 +L + RL + + + + + + + LY + ++V+Y Sbjct: 207 SFSLRFTEGPAIISGVNNNDRLYMLKKDFNSAISQASLTVTTPMISLYP--YVISNVFYI 264 Query: 240 FLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLL 299 L + ++ L +S +M EI + +F V YQPV DT G+E L+ Sbjct: 265 LPLSILLSFILYFLWQRWISRKMSLAEEIKKGMSSGEFSVHYQPVCDTTTKACLGVEALM 324 Query: 300 RWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPD 359 RW+ I P FI AE + +I+PLT+HLFELI +D + P GINIA + Sbjct: 325 RWQREDGKNISPVVFIRAAEEENLIIPLTKHLFELIIQDVQSWKVKKP--FHLGINIAAE 382 Query: 360 HLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDF 418 HL F AD+ + ++ + F IVLEITER+++++ + A Q L S G E A+DDF Sbjct: 383 HLAHPDFVADVLHIKNAI-SDKFNIVLEITERNLVEDTDHALQKINELRSHGCEFAVDDF 441 Query: 419 GTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETP 478 GTG+ +L L++ ++DYLKID+ FI+ + T +PVLD ++ L+ RLN++T+AEGV T Sbjct: 442 GTGYCSLGLLQKLSVDYLKIDKSFIDTLTTAEDETPVLDIIIKLSNRLNLITIAEGVSTS 501 Query: 479 EQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 QA +L V +QGY ++P+ +F +W Sbjct: 502 HQAEYLIHNNVTLVQGYLYAKPMKATEFYQWY 533 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 110/494 (22%), Positives = 202/494 (40%), Gaps = 38/494 (7%) Query: 26 LVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPEL 83 L+ L+ A + EV + + + + Y+ L +R + A Sbjct: 167 LMEDLRRHAAMLEEEVAERSRAEERIRQM-AYYDSLTGLPNRRLFNDRLRQSLALAQRHK 225 Query: 84 TARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPN 143 A +++ F L+ D T + + + + + + + +A G + N Sbjct: 226 RPLAVMFLDLDRFKLIND--TLGHAVGDRLLMAVAKRLRNCCRREGDTVARQGGDEFIIN 283 Query: 144 KPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMN 203 AI + +++ TP + + + + Sbjct: 284 LSAISDVKDAFTVAQK----IIDVFRTPFVIDGYELFITTSIGISV----YPHDGRSGDA 335 Query: 204 VNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMR 263 + + D+ + K G +L+A + R+ Sbjct: 336 LVKNADVAMYRAKEQGRN-NCQLFAPEMNARAF-----------------------ERLS 371 Query: 264 PGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKM 323 ++ A++R++F + YQP V+ + ++ +E L+RW+HP G +PP FI AE + Sbjct: 372 LENDMRRALERDEFVLHYQPKVNVEHGQIACMEALVRWQHPSMGLVPPSRFIPLAEETGL 431 Query: 324 IVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQ 383 IVPL + + + + ++ +N++P L + ++L Sbjct: 432 IVPLGEWVLRTACQQNRAWQDAGYPTMQVAVNLSPRQLRQGDLSETVARVLAETGLAPGW 491 Query: 384 IVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGF 442 +V+E+TE ++ + +E + F L +GV I+IDDFGTG+S+L YL++F + LKIDR F Sbjct: 492 LVIEVTESILMDDAEETIRTFRRLDRMGVRISIDDFGTGYSSLHYLKKFPVHTLKIDRSF 551 Query: 443 INAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 + I + + AV+++AK LN+ VAEGVET EQ L +MQG+ S P P Sbjct: 552 VREIASNPDDEAIAGAVISMAKGLNLGVVAEGVETVEQMEVLRALNCRYMQGFLFSEPAP 611 Query: 503 LDDFVRWLKKPYTP 516 + F L TP Sbjct: 612 AEQFTPVLGHAATP 625 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 83/252 (32%), Positives = 133/252 (52%), Gaps = 2/252 (0%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 RM + A++ +Q + YQP+VD+ ++ G+E LLRW HP G I P FI AE Sbjct: 619 RMMLENNLRNALQHDQLIIYYQPLVDS-TNQIVGMEALLRWHHPELGLISPSQFIPLAEE 677 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +IVP+ + + + A + ++ +N++ I+++L + Sbjct: 678 TGLIVPIGKWVLRCACQQARKWHEMGYTRFYVAVNLSVRQFREPDLVETIEQILEATDLP 737 Query: 381 HFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 + LE+TE +++ E A L + G+ +IDDFGTG+S+L YL+RF +D LKID Sbjct: 738 PDCLKLEVTESGIMEHPEQAIAKMKMLRAKGIHFSIDDFGTGYSSLSYLKRFPIDTLKID 797 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 R F+ T ++ ++ +A+ L M TVAEGVE EQ +L G + MQGY+ R Sbjct: 798 RSFVIDSTTNKDDQEIIKTIIAMARNLGMDTVAEGVEAKEQQDFLIHHGCHMMQGYYFGR 857 Query: 500 PLPLDDFVRWLK 511 P+P + F L+ Sbjct: 858 PMPAEKFEDMLQ 869 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 89/327 (27%), Positives = 155/327 (47%), Gaps = 10/327 (3%) Query: 194 LSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---V 250 + T + +++NV + + + + L+ D D M Sbjct: 557 VITVAKKMINVFAAPLLLMGNEIYVTASIGIALFPTDGETVDALLKNADAAMYHAKEQGK 616 Query: 251 GLLCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHP 304 +Y + R+ + A+K ++F + YQP VD + R+ G+E L+RW HP Sbjct: 617 NNYQFYSAEMNIRVFERLSLETSLHRAVKNQEFLLHYQPRVDLRNGRICGVEALVRWNHP 676 Query: 305 VAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSE 364 G + P FI AE +IVP+ + + + ++ +N++ E Sbjct: 677 EMGLVSPAKFIPLAEETGLIVPMGEWVLRTACAQNKAWQDAGLPPLRMAVNLSARQFRQE 736 Query: 365 SFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHS 423 + A ++++L + LE+TE +++E E + + L G+E+AIDDFGTG+S Sbjct: 737 NLIAMVEEILMETGLAPQWLELELTESLVMQEAEKSAAILRELTDRGIEVAIDDFGTGYS 796 Query: 424 ALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARW 483 +L YL+RF + LKID+ FI + + + ++ ++T+A L M T+AEGVE EQ + Sbjct: 797 SLSYLKRFPIANLKIDQAFIRDMTRDPDDATLVKTIITMAHGLGMKTIAEGVELAEQIDF 856 Query: 484 LSERGVNFMQGYWISRPLPLDDFVRWL 510 L MQGY+ SRP+ ++ R L Sbjct: 857 LCRHQCEEMQGYYFSRPITAEELGRLL 883 >UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F127_9PROT Length = 529 Score = 433 bits (1115), Expect = e-120, Method: Composition-based stats. Identities = 89/252 (35%), Positives = 142/252 (56%), Gaps = 1/252 (0%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+ E+ AI+R +F + YQP ++ + V G+E L+RW+HP G IPP FI+ AE Sbjct: 272 RLNMESEMRKAIERGEFVLHYQPQINATSGHVVGMEALIRWQHPERGMIPPYHFISVAEE 331 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 MIVP+ + + R +K +N++ ++ L + Sbjct: 332 TGMIVPIGEWVMYEACRQNKAWHDAGLAELKVAVNLSARQFSDRKLLDKVRHALKQSGLN 391 Query: 381 HFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 + LEITE ++K+ EAT L + S+G+ +AIDDFGTG+S+L YL+RF +D LKID Sbjct: 392 PAFLELEITESVIMKDIEATIALLEEIASMGLSLAIDDFGTGYSSLNYLKRFPIDKLKID 451 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 + FI+ + + +++A++ L+ L + + EGVE EQ WL ER N +QGY+ S+ Sbjct: 452 KSFIDDVISSEDDGKIVEAIIGLSHNLKLNVICEGVEDAEQFAWLQERQCNEIQGYYFSK 511 Query: 500 PLPLDDFVRWLK 511 PLP D+F +++ Sbjct: 512 PLPADEFEAFVR 523 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 89/300 (29%), Positives = 146/300 (48%), Gaps = 10/300 (3%) Query: 221 PLTVRLYADDWTWNDVWYAFLLGGMS---GTVVGLLCYYLMSV------RMRPGREIMTA 271 + + + D AF M G +Y + R+ + A Sbjct: 483 SMGISIAPTDTQHPKELLAFAEIAMYQAKGLGGNKCQFYTAEMNSRAKTRIELESYLRKA 542 Query: 272 IKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHL 331 + ++QF + YQP D Q+ + G E LLRW+HP G I P+ FI AE +I+ + + + Sbjct: 543 VNQDQFVLYYQPQFDIQSGELVGCEALLRWQHPQMGMISPNDFIPLAEETGVIIEIGEWV 602 Query: 332 FELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITER 391 + + + ++ +NI+P F I++++ + + LEITE Sbjct: 603 LQEACLQNKKWQDAGHSPIRVAVNISPRQFREPGFLEMIERVVQTTGIKPEWLELEITES 662 Query: 392 DMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTET 450 ++ + + A + L + G+ +AIDDFGTG+S+L YL+RF L LKIDR F+ I T+ Sbjct: 663 LLMDDIDSAINILKQLKAKGIHLAIDDFGTGYSSLSYLKRFPLSRLKIDRSFVRDITTDD 722 Query: 451 ITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 + + AV+ LA +N+ VAEG+ET EQ +L E+G QGY S P+ + F + Sbjct: 723 NDASITKAVIALAHSMNLKVVAEGIETQEQLLFLKEKGCEVGQGYLYSPPVAKEPFDHFF 782 >UniRef50_Q1VEI6 Putative uncharacterized protein n=1 Tax=Vibrio alginolyticus 12G01 RepID=Q1VEI6_VIBAL Length = 511 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 134/511 (26%), Positives = 249/511 (48%), Gaps = 17/511 (3%) Query: 6 PNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTT 65 + R L +A ++++++V L + + + + +D+ F + Sbjct: 2 IDLSRVRPLFVTLASIILSLIVLQLSYKTFLSSLQEQALDRADSIVHKIDSIFFYAEEAN 61 Query: 66 DRLQPLT--LDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPA 123 +R L + C +A+ EL AA VRT + D C+S G+ ++ Sbjct: 62 ERTLSLALRGNNCDEASYELRKIAASIPYVRTTNISVDGYINCTSLWGDKIFEDDDERYV 121 Query: 124 LDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYD 183 LD + ++PG+ + N P IV+ R + + L+L +LF S+ D Sbjct: 122 LD-----KLLLMPGSQVAQNHPLIVL--RTNKDNMAALSGIDALHLRQTLFSSTL--DSH 172 Query: 184 GVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYA---F 240 +G L + L + V +K P ++ + + + ++ F Sbjct: 173 LAYFSLGKIWLDQNGALLNRDPTKQLVGVESSKSDFFPYSISVGFSYSSLQEAFWHEKKF 232 Query: 241 LLGGMSGTVVGLLCYYLMS--VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVL 298 + + + L YY E+ AIK+++F Q VV+ + + G+E+L Sbjct: 233 YILLILLIQLSFLVYYWWHTTRPQSLDEELKRAIKKKEFVPYAQAVVNAKTREIEGVEIL 292 Query: 299 LRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAP 358 +RW HP+ G + PD FI AE +IVP+T+ L + A+ + L G+NI+P Sbjct: 293 MRWLHPIQGVVRPDLFIPQAEESGLIVPMTELLLKETAKQLCDYSSHLTKPFHVGVNISP 352 Query: 359 DHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLF-AWLHSVGVEIAIDD 417 H + ++ + ++ + +VLE+TER++L E+T++ + L +G +IAIDD Sbjct: 353 QHCRGMGLANECKEFIQTVNQENIMLVLELTEREVLDFSESTEVLFSDLKKLGCKIAIDD 412 Query: 418 FGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVET 477 FGTGHS+L L++F ++Y+KID+ F+ +G+ + ++++ + LA RL++ VAEGVET Sbjct: 413 FGTGHSSLANLQKFQVNYIKIDQMFVQGVGSNPTSRHLVESTIELANRLSLEIVAEGVET 472 Query: 478 PEQARWLSERGVNFMQGYWISRPLPLDDFVR 508 EQ +L+ V ++QG+ S+P+PL++F++ Sbjct: 473 EEQQEYLANYHVKYLQGFLFSKPIPLEEFLQ 503 >UniRef50_B4T8H8 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=39 Tax=Enterobacteriaceae RepID=B4T8H8_SALHS Length = 516 Score = 430 bits (1107), Expect = e-119, Method: Composition-based stats. Identities = 144/507 (28%), Positives = 225/507 (44%), Gaps = 11/507 (2%) Query: 14 LTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTL 73 + I +++ ILV L + + + ++ A + L Sbjct: 1 MLFIAVPLIVMILVGLLAGIFQLKR---DIAVSANTLLRFSADISAASWQVARKAARLAE 57 Query: 74 DTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMA 133 +C EL+ AF+ VR +++ CS TG + + L + + Sbjct: 58 SSCTDTLKELSRTRAFTPYVRDIGFLENGDITCSFVTGTERYHFSR-LAGLSLPASYPER 116 Query: 134 ILPGTPMVPNKP-AIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNT 192 L + P +V+ Y + N F ++ L E +L G Sbjct: 117 WLRSIGSMAEGPDRLVVVYVKKVAANKAAFVIVDSQYVQELMEILAAERASAFSLTFGAG 176 Query: 193 ALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGL 252 T ++ L LT + + W + F+ + +V + Sbjct: 177 EAITSAATLRGKAFLTQRFTSTDHTIQLMVRTPFSTLSAYWLQNLFIFIPLSLCLSVGMM 236 Query: 253 LCYY-LMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPP 311 L Y R+ REI I +F V YQPV + + G+E L+RW P I P Sbjct: 237 LFYRRWYLKRLSLAREIARGITHNEFTVHYQPVFNVEDGSCGGVEALMRWPQPDGRFITP 296 Query: 312 DAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQ 371 D FI AE++ MI+PL++HLFELIA D + +NI+P HL + F DI+ Sbjct: 297 DIFITAAENEGMIIPLSRHLFELIAHDVINW--TVSDDFYISVNISPAHLMDDGFIQDIE 354 Query: 372 KLLTSLPAHHFQIVLEITERDML-KEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLER 430 L T L ++LE+TER ++ + + + + L GV IAIDDFGTG+ +L YL++ Sbjct: 355 ALRTRLGT--ITLMLELTERSLIVEPSQVAEKLSTLREKGVLIAIDDFGTGYCSLSYLQQ 412 Query: 431 FTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVN 490 +D LKIDR FI+ I T + PVLD ++TL++RL + VAEGV T Q R++ GV Sbjct: 413 LPVDSLKIDRTFIDTIDTSSDDVPVLDTIITLSQRLGLNVVAEGVSTQHQLRYILSHGVG 472 Query: 491 FMQGYWISRPLPLDDFVRWLKKPYTPQ 517 F+QG+ +RP+ +DF+ WL K Q Sbjct: 473 FVQGFLYARPMGANDFMSWLGKSAQRQ 499 >UniRef50_Q7P1U8 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P1U8_CHRVO Length = 513 Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 152/501 (30%), Positives = 240/501 (47%), Gaps = 19/501 (3%) Query: 23 IAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPE 82 + + + +D L PL C +A Sbjct: 25 PFAATAPALLWQERQDLSASVRQQLDQGLELVDGILDQADEAARVLLPLAGGPCDKAVYP 84 Query: 83 LTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVP 142 L + A + VR+ VL+ +CSS +G + +PA D + M +L G + P Sbjct: 85 LRRQVAVAPFVRSAVLLDGDTVYCSSLSGST----SWAMPARDFVQGR-MQLLSGNAVTP 139 Query: 143 NKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLM 202 N P + +YR ++ V A L +L +S D V L +G L + Sbjct: 140 NVPLL--YYRLHRGGDAAVTAVDGRYLQLALQDAS---DTIPVFLQVGEHWLGPRRNGAG 194 Query: 203 NVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYA-----FLLGGMSGTVVGLLCYYL 257 L + + + P TVR D W+ ++ ++ + G + G Y+L Sbjct: 195 QAPALGQVA-ELRRSSRYPFTVRANYDLPPWHRQLWSHHAPLTVILLLLGLLAGATLYWL 253 Query: 258 MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 + E+ A+ ++F QP+V G EVL+RWRHP G I PD FI Sbjct: 254 LGRPASFTGELRRALANDEFEGYLQPIVKPGLPDWRGAEVLMRWRHPREGLIRPDLFIPR 313 Query: 318 AESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSL 377 AE +IV +T+ + + + L LP G+NI+ HL S D ++ L Sbjct: 314 AEESGLIVEMTRRMMDAVIAKVGRL--SLPQDFHLGVNISRAHLQEGSLYGDCRRWAGLL 371 Query: 378 PAHHFQIVLEITERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYL 436 + LE+TER+M++ E LF L ++GV+IA+DDFGTGHS+L+YL++ T+D L Sbjct: 372 AESGAVLTLELTEREMVEITPEVEALFRSLDALGVKIALDDFGTGHSSLVYLQQLTVDGL 431 Query: 437 KIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYW 496 KID+GF+ IG++ ++ ++D+V LA +L + TVAEGVET EQ +LS GV ++QG++ Sbjct: 432 KIDQGFVAGIGSDGLSGHIVDSVAELAAKLGLETVAEGVETAEQFDYLSRLGVGWLQGFY 491 Query: 497 ISRPLPLDDFVRWLKKPYTPQ 517 I+RP+PLD+FVR +++ T Q Sbjct: 492 IARPMPLDEFVRRVRQGGTWQ 512 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 78/253 (30%), Positives = 136/253 (53%), Gaps = 1/253 (0%) Query: 260 VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAE 319 R+ + + A++R++F V YQP VD + R+TG+E L+RW+ P G I P +FI AE Sbjct: 701 ARLTMEKYLRRALERDEFLVHYQPKVDLLSGRITGMEALVRWQSPELGFISPASFIPLAE 760 Query: 320 SQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPA 379 +IV + + + + + +N++P E + ++ Sbjct: 761 ETGLIVAIGEWVLRTACAQNKAWQDDGLPPMVVAVNLSPRQFRQEDLADTVHRIAEETGL 820 Query: 380 HHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKI 438 I LE+ E ++ + + A + L +GV++ +DDFGTG+S+L YL+RF D +KI Sbjct: 821 APRYIELEVVESLLMDDVDGAVAMLDALKELGVQLTMDDFGTGYSSLSYLKRFPFDMMKI 880 Query: 439 DRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWIS 498 D+ F+ I + ++ ++ V++LA LN+ VAEG+ET Q +L + MQG++ S Sbjct: 881 DQSFVRDITRDPGSAAIVRTVISLAHTLNLRVVAEGIETEGQLGYLRGLACDEMQGFYFS 940 Query: 499 RPLPLDDFVRWLK 511 RP+P +F + L+ Sbjct: 941 RPVPAAEFEQMLR 953 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 92/329 (27%), Positives = 153/329 (46%), Gaps = 10/329 (3%) Query: 193 ALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS---GTV 249 L+T + ++M + V + + +Y DD M + Sbjct: 783 YLNTIARKIMATLAQPFILVGRELFISASIGISVYPDDGLDTASLLKHADAAMYRAKESG 842 Query: 250 VGLLCYYLMSVR------MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRH 303 +Y + + A++R +F + YQP VD ++ ++ G E ++RW+H Sbjct: 843 KNTFRFYAAEANTNSVELLTLENNLRRAVERNEFVLHYQPKVDLRSQKIIGAEAVVRWQH 902 Query: 304 PVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHS 363 P G + P FI AE +I+ + + R A E +++ V+ +N++ Sbjct: 903 PELGMLSPMQFIPLAEETGLIIDIGAWIMRESCRQAVEWQQLTGQNVRVAVNLSARQFRD 962 Query: 364 ESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGH 422 E+ + I LT + LEITE ++ E A ++ H +G + IDDFGTG+ Sbjct: 963 ETLRQTIADALTESGLTPDCLELEITESMIMHNAERAREVLQHFHDLGAHVLIDDFGTGY 1022 Query: 423 SALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQAR 482 S+ YL+ F +D LKIDR F+ I + + A++ +A L + VAEGVET EQ Sbjct: 1023 SSFGYLKHFPIDSLKIDRSFVRDIPDDVDDMAITQAIIAMAHSLQIKVVAEGVETQEQLA 1082 Query: 483 WLSERGVNFMQGYWISRPLPLDDFVRWLK 511 +L ++G + +QG+ S PL DFVR LK Sbjct: 1083 FLKKQGCDQIQGFLFSEPLHSHDFVRMLK 1111 >UniRef50_C5BG29 Cyclic diguanylate phosphodiesterase (EAL) n=2 Tax=Edwardsiella RepID=C5BG29_EDWI9 Length = 514 Score = 426 bits (1097), Expect = e-118, Method: Composition-based stats. Identities = 135/514 (26%), Positives = 244/514 (47%), Gaps = 21/514 (4%) Query: 9 GRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTL---ITDVQKYLDTYFADLKSTT 65 + L +++ + +++ ++W ++ +T +D + ++ Sbjct: 8 RWRSYLRPLLSAGAVGMVLLLATVTISWQASRGLAESAKQRLTLAIGQIDEALDNAQTAV 67 Query: 66 DRLQPLTLDTCQQANPE-LTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPAL 124 D ++ C L +A +VR+ L + +CSS G + + Sbjct: 68 DAVRRYAGQPCDTTLHNMLAFQATTVPDVRSVSLAQASVIYCSSLYGAFHAEVGD----- 122 Query: 125 DINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDG 184 D N + ++ G + P++ +V +R P ++ V ++ ++ S Sbjct: 123 DHYTNKRLTLMSGNRITPHRSLVV--FREPGPGDASVLVGIDGYYLRNILRSLSTP--TP 178 Query: 185 VALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRL-----YADDWTWNDVWYA 239 + L IG + + + D + P++V + + + Sbjct: 179 LYLRIGAGWMDPQGQVVDALP-PVDGRRFVRHSSRYPISVTTAVPIDSHWTYMLDYSRGS 237 Query: 240 FLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLL 299 +L + V G+ Y L+ P + A+++ QF QPVVD ++G E+L+ Sbjct: 238 LVLFLVLAFVFGVGTYRLVGQVNSPVFYLREALRQRQFIPYIQPVVDGADESLSGCEILM 297 Query: 300 RWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPD 359 RW+HP G IPP+ FI AE +IV +T+ + ++ A + LP FG NI+ Sbjct: 298 RWQHPQMGLIPPNNFIPLAEDSGLIVAMTRDIMRQVSDYFAPRCRSLPTHFHFGFNISAS 357 Query: 360 HLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDF 418 H + S + ++ + + A+ ++VLE+TER + + E T Q+F L +GV +A+DDF Sbjct: 358 HFNDLSLVEECRRFIDAFEANPIRLVLELTERQRVPDGELTEQIFHKLRGLGVLLALDDF 417 Query: 419 GTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETP 478 GTGHS+L YL+R+ D +KIDR F+ IG++ ++ ++D V+ LAKRL+M+T+AEGVE+ Sbjct: 418 GTGHSSLAYLQRYHFDIIKIDRSFVRMIGSDMLSGHIVDTVIALAKRLDMITLAEGVESG 477 Query: 479 EQARWLSERGVNFMQGYWISRPLPLDDFVR-WLK 511 EQ + L ++++QGY P PL DF R WLK Sbjct: 478 EQLQHLRGYRLDYLQGYLFGCPQPLPDFTREWLK 511 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 84/269 (31%), Positives = 142/269 (52%), Gaps = 7/269 (2%) Query: 251 GLLCYYLMSVR------MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHP 304 C++ ++ ++ G + A+ R Q ++ YQP + TQ V G E LLRW+HP Sbjct: 878 NGFCFFTSEMQAHSARTLQLGNALRHALTRGQLHLHYQPQISTQDGHVVGAEALLRWQHP 937 Query: 305 VAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSE 364 G I P FI AE I+P+ + + + + + +N++ Sbjct: 938 ELGSISPAEFIPIAEDNGQIIPIGEWVLRTAIKQLKDWMDSGLPPMIMAVNLSAAQFRQS 997 Query: 365 SFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHS 423 + + +L H + LE+TE + + + A + LH+ G++++IDDFGTG+S Sbjct: 998 NLMELVTSILDESKVPHRYLELELTEAVAMDDPQLAIGVMDKLHTGGIKMSIDDFGTGYS 1057 Query: 424 ALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARW 483 +L YL+RF + LKID+ F++ I + ++ A++ +A L M T+AEGVET Q + Sbjct: 1058 SLSYLKRFKVYKLKIDQSFVHDITDDPDDKAIVAAIINMASSLGMQTIAEGVETAGQLSF 1117 Query: 484 LSERGVNFMQGYWISRPLPLDDFVRWLKK 512 L +G N +QGY+ S+PLP + FV +L+K Sbjct: 1118 LRLQGCNEVQGYYFSKPLPAEQFVSYLQK 1146 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 95/334 (28%), Positives = 164/334 (49%), Gaps = 10/334 (2%) Query: 190 GNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYAD-----DWTWNDVWYAFLLGG 244 G +A S + +L+ + + + +Y D D + A Sbjct: 586 GESAASVVAQKLLIALATPYDLDGQVISTQASIGISIYPDQAQDADTLIKNADMAMYRAK 645 Query: 245 MSGTVVGLLCYYLMSVR----MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLR 300 G M+ R +++ A++R + ++ YQP D + ++G+E L+R Sbjct: 646 EEGRNNFQFFVPEMNFRVDLLFSMEKDLRLALERGELFLQYQPQADLASGTLSGVEALIR 705 Query: 301 WRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDH 360 W HPV G++ P FI AE IV + + + AE K + +N++ Sbjct: 706 WDHPVKGQVSPAEFIPVAEETGQIVAIGEWVLRTACSQMAEWRKTGMHDLTIAVNLSIRQ 765 Query: 361 LHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFG 419 L I+ +L + LEITE M+ + +A + + + +GV+++IDDFG Sbjct: 766 LRQPDLAELIKSVLLETGLDARHLELEITEGIMMGDNQAAFRFLSEMQDLGVQLSIDDFG 825 Query: 420 TGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPE 479 TG S+L YL++ ++ LKID+ FI I T+ + ++ ++++L RLN+ +AEGVET E Sbjct: 826 TGFSSLNYLKQMPVNKLKIDQSFIRDIETDEGDAAIIRSIISLGHRLNLRVIAEGVETQE 885 Query: 480 QARWLSERGVNFMQGYWISRPLPLDDFVRWLKKP 513 Q +L RG + +QGY+ SRPL +DF+R++K P Sbjct: 886 QLDFLRIRGCDEIQGYFYSRPLLAEDFMRFVKAP 919 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 96/334 (28%), Positives = 157/334 (47%), Gaps = 10/334 (2%) Query: 188 IIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDW-----TWNDVWYAFLL 242 I A +T + +L+ IA + + ++ D + + A Sbjct: 554 IRDERAAATLAQKLLRQFRQKVAINGHEIIASASIGIAMFPKDGDNGDELFRNADTAMYR 613 Query: 243 GGMSGTVVGLLCYYLMSVRMR----PGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVL 298 G M+ RMR + + AI Q + YQP +D + V E L Sbjct: 614 AKDVGRNGFQFYSAEMNNRMRERLYLEQSLRNAIGLHQLSLWYQPKLDLASGSVKSAEAL 673 Query: 299 LRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAP 358 +RWRHP G I P FI AE +I+P+ + E +R A+ ++ INI+ Sbjct: 674 IRWRHPQLGMISPGDFIPIAEETGLILPIGAWVIEEASRQLAKWRDQENQDIRVAINISA 733 Query: 359 DHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDD 417 L + + L SL + +E+TE ++ + + A L +G+ +A+DD Sbjct: 734 YQLSHGKLTDQVIQALDSLGLDPQSLTIEVTETAIMPQMDKAVCELQSLREMGIRVALDD 793 Query: 418 FGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVET 477 FGTG+S+L YL+RF +D LKIDR F++ I + + ++ ++ LA LNM VAEGVET Sbjct: 794 FGTGYSSLTYLKRFPIDILKIDRSFVSDIADDEESGAIVKTIINLAHNLNMTVVAEGVET 853 Query: 478 PEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 Q +L G + +QGY+ +PLP ++ + +L+ Sbjct: 854 EAQLEFLRTNGCDEVQGYYFCKPLPSEECLEFLR 887 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 423 bits (1088), Expect = e-117, Method: Composition-based stats. Identities = 97/334 (29%), Positives = 156/334 (46%), Gaps = 14/334 (4%) Query: 193 ALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWT-----WNDVWYAFLLGGMSG 247 + + RL+N+ R + + + +Y D T W A SG Sbjct: 713 GAAYLAERLLNIAARQYNIERHEINLTVSIGIAMYPTDGTDFDTLWRSADAAMYRAKQSG 772 Query: 248 TVVGLLCYYLMSVR------MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRW 301 C++ ++ ++ + A++R QF + YQP + R+ G E L+RW Sbjct: 773 R--NDYCFFTTEMQARSARTLQIDNALRRALERNQFSLVYQPQLSLNTNRIVGFEALIRW 830 Query: 302 RHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHL 361 HP G PPD FI AES I+P+ + + + R + V +N++ Sbjct: 831 THPQFGNTPPDEFIPIAESNGQIIPIGEWVLKTAVRQLRLWQDNGLKDVTISVNLSAVQF 890 Query: 362 HSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGT 420 + +L + LE+TE ++ A + L G+ I+IDDFGT Sbjct: 891 RHPRLPELVMAILEEAGVSPECLQLELTEGVAMENPLAAITVIDELRKKGIRISIDDFGT 950 Query: 421 GHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQ 480 G+S+L YL+RF + LKIDR F+ + +T ++ AV++LA L M+TVAEGVET EQ Sbjct: 951 GYSSLTYLKRFNVYSLKIDRSFVQDLPNDTEDMAIVSAVISLADSLGMITVAEGVETKEQ 1010 Query: 481 ARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPY 514 +L RG +QGY++SRPL D +++ + Sbjct: 1011 LEFLRSRGCTEIQGYYLSRPLQADAVFSFIEDDH 1044 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 423 bits (1088), Expect = e-117, Method: Composition-based stats. Identities = 85/300 (28%), Positives = 145/300 (48%), Gaps = 11/300 (3%) Query: 221 PLTVRLYADD-----WTWNDVWYAFLL----GGMSGTVVGLLCYYLMSVRMRPGREIMTA 271 + + +Y DD A L G + + +++ +++ RE+ A Sbjct: 507 SIGISMYPDDGDDIEALLKHADAAMYLAKEQGKNNYQFFSEELHQVLAKKLQLERELRKA 566 Query: 272 IKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHL 331 + +QF + YQP + Q ++ G+E L+RW HP G IPP FI AE +IVPL + + Sbjct: 567 LDEKQFTLHYQPKIHLQTGQIIGMEALIRWDHPDLGLIPPIQFIPIAEETGLIVPLGEWV 626 Query: 332 FELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITER 391 + ++ + +NI+ + I +L + LEITE Sbjct: 627 MRTACQQTKAWQEAGFTQLAVAVNISLRQFMQNNLIEMITSILEETGLAPQYLELEITES 686 Query: 392 DMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETI 451 L ++ L ++GV I+IDDFGTG+S+L YL +F +D LKID+ F+ + Sbjct: 687 MALNVDYTIRILNRLKALGVSISIDDFGTGYSSLSYLSQFPIDRLKIDQSFLRNL--NPQ 744 Query: 452 TSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 ++ ++ +A + + +AEGVET E +L E+ N +QGY+ S+PLP + +L+ Sbjct: 745 NQAIIKTIIHMAHNMKIAVIAEGVETHEHVDFLKEQLCNEVQGYFYSKPLPTKEIDSFLQ 804 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 82/275 (29%), Positives = 133/275 (48%), Gaps = 10/275 (3%) Query: 240 FLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLL 299 F GM+ T V L ++ AI++ Q + YQP +D + +TG+E L+ Sbjct: 488 FYTKGMNATAVNYLL---------LENDLRRAIEQNQLALYYQPQIDLKTGDMTGVEALV 538 Query: 300 RWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPD 359 RW+HP G + P FI AE +IVP+ + + + K +N++P Sbjct: 539 RWQHPERGLVSPAHFIPLAEETGLIVPIGEWVLREACKQKKIWLDTGKNVGKVAVNLSPR 598 Query: 360 HLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDF 418 ++F ++ +L + LEITE ++ E L+ +G +AIDDF Sbjct: 599 QFRQKNFPGKVEAILQETGLEAKYLELEITESCAMEHAGETINQLNQLNQMGTFLAIDDF 658 Query: 419 GTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETP 478 GTG+S+L YL+RF + LKIDR FI+ I + + + ++ LA + + VAEGVET Sbjct: 659 GTGYSSLAYLQRFPIQKLKIDRSFIHDIHDDANDAAIAKTIIGLAHNMQLRVVAEGVETE 718 Query: 479 EQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKP 513 QA WL +G + +QG+ ++P+ Sbjct: 719 SQAEWLRAKGCDQVQGFLYAKPMTAKQLESHFHNG 753 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 88/329 (26%), Positives = 155/329 (47%), Gaps = 10/329 (3%) Query: 198 SSRLMNVNELTDMPVRETKIAGIPLTVRLYADD-----WTWNDVWYAFLLGGMSGTVVGL 252 + +L+ + + + ++ DD + A G Sbjct: 422 AEKLLAAATVPYEIGSHEITVSASIGIAVFPDDGENGELLTKNADAAMYHAKSLGRNNYQ 481 Query: 253 LCYYLMSVRM----RPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGE 308 M+ R+ ++ A++R +F + YQP +D + +V G E L+RW+HP G Sbjct: 482 FFTRAMNERVMEIAELESKLRRAVERNEFVLYYQPKIDIRTGQVVGAEALIRWQHPSWGL 541 Query: 309 IPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKA 368 + PD FI AE +I P+ + R E + + +N++ L +F Sbjct: 542 VAPDRFIPIAEDSGLIRPIGLWVMREACRQNQEWQAAGLARIPVAVNLSTVQLRQHNFLQ 601 Query: 369 DIQKLLTSLPAHHFQIVLEITERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTGHSALIY 427 ++ ++L + LE+TE + E E L S+GV++A+DDFGTG+S+L Y Sbjct: 602 EVSEILLMSGLEPDYLELEVTESVAIHAETEVINWLHKLRSMGVKLALDDFGTGYSSLSY 661 Query: 428 LERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSER 487 L+R ++ +KID+ FI I T+ + ++ A++ ++ L + +AEGVE Q +L + Sbjct: 662 LKRLPINNVKIDKSFIRDIETDPDDATIITAIIRMSHGLRLNVIAEGVENINQLEFLKKE 721 Query: 488 GVNFMQGYWISRPLPLDDFVRWLKKPYTP 516 G + MQG+ SRP+P D+F L+ TP Sbjct: 722 GCDQMQGFIASRPVPADEFALLLQNWPTP 750 >UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBG1_BREBN Length = 805 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 92/330 (27%), Positives = 155/330 (46%), Gaps = 9/330 (2%) Query: 191 NTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV- 249 +S+ ++ + E + + Y +D V M Sbjct: 470 EREVSSMANEINETIEQAFFIHGHELYITTSIGISRYPEDGQDRSVLMRNADAAMYAAKD 529 Query: 250 VGLLCYYLM--------SVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRW 301 G ++L + +M E+ A+ R++F + YQP V ++ + G+E L+RW Sbjct: 530 KGKNSFHLYVPNLEQAVNDKMNIQNELNRALARQEFLLHYQPQVSAKSGAIVGVEALIRW 589 Query: 302 RHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHL 361 HP G + PD FI+ AE +IVP+ + + + + + ++ +N++ Sbjct: 590 DHPERGLLLPDQFISVAEETGLIVPIGEWVLRTACKQNKQWQDQGLKPLRVAVNLSARQF 649 Query: 362 HSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTG 421 + F I ++L + LEITE M+ ATQ L +GV +AIDDFGTG Sbjct: 650 LKQDFTQMIAEILHQTRLAPEYLELEITESSMIDVHRATQALKELKQLGVHVAIDDFGTG 709 Query: 422 HSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQA 481 +S+L YL+ F L+ LKIDR F+ + + ++ ++++A L M +AEGVET E+ Sbjct: 710 YSSLYYLKEFPLNRLKIDRSFVRDMIEQPSNQAIVSTIISMAHHLQMHVIAEGVETKEEL 769 Query: 482 RWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 +L E +QGY SRPLP +D +L+ Sbjct: 770 AFLQEHLCEEVQGYLFSRPLPSEDVAFYLQ 799 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 82/328 (25%), Positives = 151/328 (46%), Gaps = 10/328 (3%) Query: 194 LSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGL 252 + + R++ + + + + + +Y + + + +G Sbjct: 522 ATRAADRILKKFQQPWILEGKEYYITASMGIGIYPNGGEDPQTIFKNADTALYRAKELGR 581 Query: 253 LCYYLMS--------VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHP 304 Y L + R+ + AI++E+F + YQP +D + ++ G E LLRW HP Sbjct: 582 NNYQLYTESMNQKVLQRLDIENSLRRAIEKEEFVLFYQPQIDIKTGKIVGFEALLRWYHP 641 Query: 305 VAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSE 364 G +PP FI AE +IV + + + E R + + +N++ Sbjct: 642 DYGLMPPMEFIPVAEDSGLIVVIGEWVLETACRQNKKWIECGLEPHLISVNLSARQFQRS 701 Query: 365 SFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHS 423 + I ++ +S + LEITE +++ + L G+ +++DDFGTG+S Sbjct: 702 NIVEVIDRIRSSTGLAPELLELEITESTAMQDLSFTIDVLNQLRKKGIRVSLDDFGTGYS 761 Query: 424 ALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARW 483 +L YL + +D LKID+ F+ I + + V++LA +L++ VAEGVET EQ + Sbjct: 762 SLNYLRQLPIDTLKIDKSFVQDIRANSKEEAIAKTVISLAHKLDLTVVAEGVETKEQLLF 821 Query: 484 LSERGVNFMQGYWISRPLPLDDFVRWLK 511 L + + QGY S+PLP ++ + L+ Sbjct: 822 LKKEKCDKAQGYLFSKPLPAEEIEKMLR 849 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 93/352 (26%), Positives = 164/352 (46%), Gaps = 10/352 (2%) Query: 170 TPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYAD 229 T ++ E ++ I L+ + +++ + + + + +Y + Sbjct: 554 TDTVARIGGDEFVIIISAIEHAEDLNKIAEKILAAISKPLVLNDQEIFITASIGIAIYPE 613 Query: 230 DWTWNDVWYAFLLGGMS-GTVVGLLCYYLMSVRMR--------PGREIMTAIKREQFYVA 280 D T M G + S M + A++R +F + Sbjct: 614 DGTDVQGLLKNADLAMYKAKDQGKNAFQYFSREMNVQALEHLILENSLRRALERNEFVIF 673 Query: 281 YQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAA 340 YQP +D ++ R+ G+E L+RW+HP G +PP FI AE +I+P+ + + Sbjct: 674 YQPQMDLKSGRLVGMEALIRWQHPDLGLLPPSRFIPMAEETGLILPIGEWALQTACAKNR 733 Query: 341 ELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDML-KEQEA 399 + ++ +N+ + F I+ +L Q+ LE+TE ++ K +E+ Sbjct: 734 AWMDAGFMPLRVAVNLCGIQFRQKKFIELIEAVLKKTGLAPSQLELELTESMLMSKAEES 793 Query: 400 TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAV 459 T + L +GV +AIDDFGTG+S+L YL+ F ++ +KIDR FI + + ++ A+ Sbjct: 794 TTVLHKLKEMGVSLAIDDFGTGYSSLSYLKNFPINRVKIDRSFIRDVPNNPDDTAIVSAI 853 Query: 460 LTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 + +A LN+ AEGVE Q +LS R N +QGY +S PLP +F R+L+ Sbjct: 854 IAMAHNLNLKVTAEGVENHSQLEFLSTRNCNEIQGYLLSSPLPEAEFTRFLR 905 >UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H2G8_METFK Length = 633 Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 102/415 (24%), Positives = 183/415 (44%), Gaps = 26/415 (6%) Query: 121 IPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK-NSGVFAALN---LNLTPSLFYS 176 +P +L G A++++ + N + + L+L Sbjct: 205 LPNRHAFSRHFHLLLEGARHRRGVLALLVFDLDDFKVINDTLGHDVGDKLLHLVAQRLMV 264 Query: 177 SRQE-------DYDGVALIIGNTA----LSTFSSRLMNVNELTDMPVRETKIAGIPLTVR 225 + + D A+++ A + ++R + + G+ + Sbjct: 265 AAGKKNTVYRVGGDEFAMMLDQPADVENVEAVANRFIRALAPPIVLNDRNFYIGVSIGAS 324 Query: 226 LYADDW---------TWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQ 276 +Y D ++YA G + + ++ S R+ E+ A++ +Q Sbjct: 325 IYPYDGEDAAHLLRDADAAMYYAKSRGKNNFQMFSAEMHHKSSTRLLLETELRVALEEKQ 384 Query: 277 FYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIA 336 F + YQP ++ G+E L+RW HP G + P +FI AE +IV + + + Sbjct: 385 FELYYQPQFSLPDCKLVGVEALIRWHHPQRGLLCPSSFIPVAEETGLIVRIGEWVLREAC 444 Query: 337 RDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKE 396 R A E K L V ++ +N++ E+ + K++ + LEITE ++++ Sbjct: 445 RQAMEW-KALGVPLRMSVNLSGRQFRQENLVQTMTKIIERTGMDSSLLELEITETVLMED 503 Query: 397 QEATQL-FAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPV 455 EAT A L ++G+ +AIDDFGTG+S++ YL+RF + LKIDR FI I + + Sbjct: 504 AEATTTRLADLKAMGMHLAIDDFGTGYSSMAYLKRFPVSRLKIDRSFIRDIPNDPDDVAI 563 Query: 456 LDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 A + +A L + VAEGVET Q ++L E+G + +QGY SRP+ + + Sbjct: 564 TTATIQMAHSLKLEVVAEGVETKAQLQFLREQGSDMVQGYLFSRPVSAREMAELV 618 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 87/332 (26%), Positives = 159/332 (47%), Gaps = 10/332 (3%) Query: 189 IGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDW-----TWNDVWYAFLLG 243 + + +L+++ + + + + Y D A Sbjct: 995 TDAEGAAHVAKKLLDIVAQPFNFHGQKIVLTASIGISAYPQDGESFEQLAQSADAALYRA 1054 Query: 244 GMSGTVVGLLCYYLMSVR----MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLL 299 G M + + E+ +AI+ E+F + YQP D++ ++ GLE L+ Sbjct: 1055 KYEGRNNFQFFARQMHEQAHDILLLESELRSAIEHEEFLLYYQPQYDSKTSKIIGLEALI 1114 Query: 300 RWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPD 359 RW+HP G + P FI AE +I + + + A ++ V +N++ Sbjct: 1115 RWQHPEKGLVSPAVFIPIAEESGLIAEIGDWVLRTAVKQLASWQEAGLGAVPVAVNLSVV 1174 Query: 360 HLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDF 418 H ++ + ++L + LE+TE +++ E T + L+S+GV ++IDDF Sbjct: 1175 QFHQDTLYGSVCQILRDTKVDPSMLELELTEGIAMEDSERTLNVLNQLNSLGVRLSIDDF 1234 Query: 419 GTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETP 478 GTG+S+L YL++F +D LKID+ F+ IG+ + ++ A++++AK L+ T+AEGVET Sbjct: 1235 GTGYSSLSYLKKFKIDKLKIDQSFVRGIGSHPQDAAIITAIISMAKSLSFKTIAEGVETL 1294 Query: 479 EQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 EQ +L + +QGY+ S+PLP + + L Sbjct: 1295 EQLNFLIANSCDEIQGYYFSKPLPSTEVTKLL 1326 >UniRef50_Q1K1R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1R0_DESAC Length = 709 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 99/362 (27%), Positives = 166/362 (45%), Gaps = 10/362 (2%) Query: 166 NLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVR 225 N+ +T +L S E + + ++ + + ++V + + + Sbjct: 345 NIRITDNLSRMSGDEFLITLDPADNLSEVTQLAQKFLSVISVPMKIEHHRFHLTASIGIS 404 Query: 226 LYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMSVRMR--------PGREIMTAIKREQ 276 L+ D T + + M G + M E+ AI++EQ Sbjct: 405 LFPGDATSPEKLLSCADSAMYRAKESGRDAFRFYKPHMNEKAQGLLWLETELRLAIEQEQ 464 Query: 277 FYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIA 336 + YQP D ++ G+E L+RW HP G IPP FI AE +I+PL + + Sbjct: 465 LELHYQPQYDLNTGQLVGMEALVRWNHPEKGMIPPGEFIPQAEETSLIIPLGEWVLNTAC 524 Query: 337 RDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKE 396 R A + ++ +NI+ + + KLL + LEITE ++ + Sbjct: 525 RQIAAWHAMGISPIRMAVNISAVQFYRIDLAQMVAKLLDHYGLPATLLELEITESVLMDD 584 Query: 397 QE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPV 455 E A + L ++G++++IDDFGTG+S+L YL+RF + LKIDR FIN + + + Sbjct: 585 VEAAAETMNKLTAMGIQLSIDDFGTGYSSLSYLKRFPISTLKIDRSFINDVTINEQDAAI 644 Query: 456 LDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYT 515 ++++LA + + +AEGVET EQ +L + QGY +RPLP D R LK + Sbjct: 645 ALSIISLAGHMGIEVLAEGVETVEQLSFLQRHACQYGQGYLFNRPLPAKDIERQLKTAHL 704 Query: 516 PQ 517 P+ Sbjct: 705 PE 706 >UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZB1_DESAC Length = 1092 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 93/336 (27%), Positives = 162/336 (48%), Gaps = 10/336 (2%) Query: 188 IIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPL-TVRLYADDWTWNDVWYAFLLGGMS 246 ++G L ++ D + + GI + V D A + Sbjct: 747 VVGADTAQRVIDALSQPFQIDDYSLHVSASIGITVAPVDAREPDELIKCADIAMFKAKDA 806 Query: 247 GTVVGLLCYYLMSVRMR------PGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLR 300 G +Y S+ ++ ++ A+ R+Q + YQP +D Q+ + G E LLR Sbjct: 807 GR--NTYKFYERSMNLKTHELLLLENDLRHALSRDQLELYYQPQLDLQSNCIVGFEALLR 864 Query: 301 WRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDH 360 W HP G + P FI AE +IV + + + R + ++ +NI+ Sbjct: 865 WNHPERGLVSPLEFIPLAEETGLIVSMGEWILRSACRQIRTWNEEHGRQLRVAVNISARQ 924 Query: 361 LHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFG 419 H ++K+L + LEITE ++ + Q + + L +GV +AIDDFG Sbjct: 925 FHHYDLVHCVEKVLEQTGVPTEWLELEITESLLMYDIQSSIETMMRLKKLGVRLAIDDFG 984 Query: 420 TGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPE 479 TG+S+L YL++F + LKID+ F++ + T+ + + ++ L LA +++++ VAEG+E E Sbjct: 985 TGYSSLSYLKKFPICSLKIDKSFVDDLLTDASDAAIAESTLALASKMDLMVVAEGIEQQE 1044 Query: 480 QARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYT 515 Q +L +RG F QGY ISRPLP+ ++ ++ +T Sbjct: 1045 QLDYLQQRGCQFGQGYLISRPLPVAQCTQFCRERFT 1080 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats. Identities = 93/325 (28%), Positives = 148/325 (45%), Gaps = 11/325 (3%) Query: 201 LMNVNELTDMPVRETKIAGIPLTVRLYADDW-----TWNDVWYAFLLGGMSGTVVGLLCY 255 L + + RE +I + LY D A G C Sbjct: 438 LNAFEQPFPLGNRELRIT-TSIGASLYPRDGEQSEDLLRHADAAMYQAKKQGGNGFQFCS 496 Query: 256 YLMSVR----MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPP 311 M R + ++ A++ F + YQP V + ++ G E L+RW HP G I P Sbjct: 497 EEMDTRAHKALELEGDLRQALQLGSFVLHYQPKVKIASGKIDGCEALVRWNHPDKGMISP 556 Query: 312 DAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQ 371 D FI AE +I+ L + + R + +K +N++ F IQ Sbjct: 557 DDFIPLAEETGLIIALGEWVLREACRQFKAWQAQGLPPIKIAVNLSARQFLQSDFVESIQ 616 Query: 372 KLLTSLPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLER 430 +L + LE+TE ++++ + +L A L +G +++DDFGTG+S+L YL R Sbjct: 617 TILHEFDIDPHWLDLELTESMVMEDPDRIAKLLAELKQIGFALSLDDFGTGYSSLNYLRR 676 Query: 431 FTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVN 490 F +D LKIDR FI + ++ + V ++V+ +A L + +AEGVET EQ +L+ + Sbjct: 677 FPIDCLKIDRSFILDVASDATAASVANSVIGIAHSLGIHAIAEGVETREQYAFLAMCECD 736 Query: 491 FMQGYWISRPLPLDDFVRWLKKPYT 515 +QGY S+PLP +D L P Sbjct: 737 SIQGYLFSKPLPANDLAALLANPTP 761 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats. Identities = 90/313 (28%), Positives = 162/313 (51%), Gaps = 6/313 (1%) Query: 206 ELTDMPVRETKIAGIPLTVRLYAD-DWTWNDVWYAFLLGGMSGT----VVGLLCYYLMSV 260 ++ D V + GI L R D + + A +G + Sbjct: 639 QIDDHEVYTSSSIGISLFPRDGRDAEELLKNADMAMYQAKEAGRNTCHFFSPELNMRATE 698 Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+ + A++RE+F++ YQP ++ ++ + G+E LLRWRHP G +PP+ FI AE Sbjct: 699 RLLLESTMRRALEREEFFLVYQPQMELRSGHIAGIEALLRWRHPDLGVVPPNNFIPIAEE 758 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +IVPL + + R A ++ ++ +N++ + I+K+L Sbjct: 759 TGLIVPLGEWVLAEACRQAVRWQQEGQPPLRMAVNVSARQFRQRNLGLRIEKILMETGLD 818 Query: 381 HFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 + LE+TE +++ +EA L +G+ ++IDDFGTG+S+L +L+ F +D LKID Sbjct: 819 PALLELELTESAVMENPEEAILTLRQLKKMGITLSIDDFGTGYSSLSHLKHFPIDRLKID 878 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 R F+ + + + + +A++ LA + + VAEG+E EQ ++ +R + MQGY++SR Sbjct: 879 RSFVKHVTRDHNDATIAEAIIALAHSMKLTVVAEGIEHSEQMEFMHQRHCDTMQGYYLSR 938 Query: 500 PLPLDDFVRWLKK 512 P+ ++F +LK+ Sbjct: 939 PVTAEEFGTFLKR 951 >UniRef50_B6BIT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BIT7_9PROT Length = 794 Score = 420 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 124/462 (26%), Positives = 209/462 (45%), Gaps = 45/462 (9%) Query: 57 YFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMD 114 Y+ L +R L+ Q A E T A +++ F L+ D T S +M Sbjct: 365 YYDSLTGLANRTLLKDRMHKAIQYAKREQTNLAVMFLDLDHFKLIND--TLGHSVGDDML 422 Query: 115 IPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLF 174 I + E++ + I ++ ++ L G V P++ +F A N+ Sbjct: 423 IHIAEILK-IHIRESDTLSRLGGDEFVILLPSV-----------KSIFDAQNIASKIQHT 470 Query: 175 YSSRQEDYDGVALIIGNTALSTFSSRLMNVNEL---TDMPVRETKIAGIPLTVRLYADDW 231 S+ + D I + +S + N EL D + E K +G R+Y+ Sbjct: 471 LQSKHDIGDHQLYITSSIGVSLYPDHGDNSEELIRNADTAMYEAKNSGRN-NYRIYSQSM 529 Query: 232 TWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQ-FYVAYQPVVDTQAL 290 + ++ ++++ A+K + V YQ +D++ Sbjct: 530 G-----------------------NYVDQQLHLEQDLIQAVKHKAGIEVFYQAKIDSENN 566 Query: 291 RVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGV 350 ++G E L RWRHP G I PD FI+ AES +++ L + E E K+ VG+ Sbjct: 567 FISGAEALARWRHPTNGLIFPDQFIHIAESTGLMIELGNIIIEESIFQLQEWNKLGLVGL 626 Query: 351 KFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSV 409 K IN++ + + I +L + Q+ EITE + T ++ L ++ Sbjct: 627 KIAINLSARQFQDPNLVSFISSMLHNYQVSPSQVEFEITETLSMTNMTNTLRILTELKAI 686 Query: 410 GVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNML 469 GV IAIDDFGTGHS+L YL++F ++ LKIDR F+ I + ++ ++++A L Sbjct: 687 GVSIAIDDFGTGHSSLAYLKKFPINTLKIDRSFVLDIIEDDDDKTIVQTIVSMAHSLGFN 746 Query: 470 TVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 TVAEGVET E L G + +QGY+ S+P+P D+F ++++ Sbjct: 747 TVAEGVETLEHVALLKTMGCDQLQGYYFSKPIPKDEFTKFIQ 788 >UniRef50_UPI00016A4C59 diguanylate phosphodiesterase n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A4C59 Length = 517 Score = 419 bits (1079), Expect = e-116, Method: Composition-based stats. Identities = 137/519 (26%), Positives = 226/519 (43%), Gaps = 19/519 (3%) Query: 1 MFIRAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFAD 60 + +R R+ I + V + +LV + +A + +V+ ++ D+ +D + Sbjct: 5 ILLRESAALRRRKALEIASFVAVILLVLTAGYHIALERAQVQRKVVVEDIDNSIDRIVTE 64 Query: 61 LKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNEL 120 + +L L C + LT R F RT ++V+D +CS+ G + IPL Sbjct: 65 TRLGERKLANLVGQPCPEVQASLTLRDVFVPYRRTAMMVQDGNAYCSTILGPVSIPLTTY 124 Query: 121 IPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQE 180 + + + L GT +P P + I+ P+ + G+ + + ++ Sbjct: 125 L--VQSGSTQQIVFLGGTQSIPEVPVMAIY--APVDRRRGILYIVEGAYVADILARAKSS 180 Query: 181 DYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAF 240 ++ G+ T R R + + I + V D + + Sbjct: 181 GAKSASVSDGSGGTLTSDGRFYKTAA------RASSMGEILVRVESDEDRLRTDLIATEI 234 Query: 241 LLGGMSGTVVGLLCY---YLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEV 297 + + ++ + + R R R + ++R +FYV YQ +VD Q R G E Sbjct: 235 VALFVGLSLFAVFLVGYNAGFTPRQRLERLVRAGLRRNEFYVEYQAIVDLQTGRWVGAEA 294 Query: 298 LLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIA 357 LLRW+HP G + P FI E+ +I PLT+ + + P G + +N+A Sbjct: 295 LLRWKHPRLGLVMPGKFIGEIETTSVIAPLTEFVLATALAELQAC--AFPDGFRVNVNLA 352 Query: 358 PDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAID 416 P H+ F DI L P F++VLEITER +LK + L + GV+ A+D Sbjct: 353 PKHIEMHCFPHDISSTLRRNPT-RFEVVLEITERGLLKRLADNHDNLMSLKTHGVKFAVD 411 Query: 417 DFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVE 476 DFGT +S L L+RF DY+KIDR F +++ + LA +L++ VAEGVE Sbjct: 412 DFGTDNSNLALLQRFDFDYIKIDRQFTAGAAN--HDRQLVEGIAYLANKLDLTVVAEGVE 469 Query: 477 TPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYT 515 EQ L E GV F QG+ RP + +F R + T Sbjct: 470 EIEQREALKEIGVRFAQGFLFQRPANILEFERMYRHSST 508 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 419 bits (1079), Expect = e-116, Method: Composition-based stats. Identities = 89/300 (29%), Positives = 147/300 (49%), Gaps = 10/300 (3%) Query: 221 PLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMSV--------RMRPGREIMTA 271 + V +Y +D M G C + R+ + A Sbjct: 627 SIGVAIYPEDGETPVQLMKNADAAMYHAKASGRNCAQYFNRSLDDSLKERISLENALNQA 686 Query: 272 IKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHL 331 +K QF + YQP +D ++ R+ G E L+RW HP G I PDAFI AE +IV + + Sbjct: 687 LKLGQFELYYQPQLDVKSNRIIGAEALIRWNHPEKGMISPDAFIPLAEESGLIVDIGSWV 746 Query: 332 FELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITER 391 + A+ K + +N++ + ESF ++ ++ + LE+TE Sbjct: 747 LHQASSQLAQWRKQGFDQLSVSVNLSALQVQKESFAREVADVIREYGVPEACLDLELTES 806 Query: 392 DMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTET 450 +++ +E +H++G++I++DDFGTG+S+L YL+RF LD LKIDR F+ I +T Sbjct: 807 MIMRNAEETIAALDKIHNLGIQISVDDFGTGYSSLSYLKRFPLDKLKIDRSFVQDITVDT 866 Query: 451 ITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 + + ++++A LN+ +AEGVET Q L + G QGY ++PLP++ L Sbjct: 867 DDAMICKTIISMAHNLNLQVIAEGVETNAQLELLRDYGCEQYQGYLFAKPLPVEQMTEHL 926 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 419 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 82/251 (32%), Positives = 134/251 (53%), Gaps = 1/251 (0%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+R E+ AI+ + + YQP VD + GLE L+RW HP+ G + P +FI+ AE Sbjct: 650 RLRIEGELRHAIELNELVLHYQPQVDLHTGAIVGLEALVRWNHPILGMVQPGSFISLAEE 709 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +I+P+ + + R A + + ++ +N++ S I+ L Sbjct: 710 TGLIIPIGAWVLQTACRQAKAWQDMGFTQLRIAVNLSARQFTQASLLESIKDTLQETGLE 769 Query: 381 HFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 + +E+TE ++ + E L S+GV++++DDFGTGHS+L YL+RF +D LKID Sbjct: 770 ARFLEIELTESSVMADIERNILTLRDLKSLGVQLSVDDFGTGHSSLAYLKRFPIDTLKID 829 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 R F+ I + ++ ++++LA L + +AEGVET Q L +G N +QGY+ + Sbjct: 830 RSFVRDIAINQDDASIVSSIISLAHNLKLNVIAEGVETASQMDILRAQGCNEIQGYYFCK 889 Query: 500 PLPLDDFVRWL 510 PLP D L Sbjct: 890 PLPSDQIETLL 900 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 111/471 (23%), Positives = 187/471 (39%), Gaps = 41/471 (8%) Query: 51 QKYLDTY--FADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFC 106 ++ ++ Y F L +R L + A +++ F + D Sbjct: 586 EEQIERYAHFDALTGLANRHALYRRLGQAITSVHQHQHPLAVLFVDLDKFKTIND---TL 642 Query: 107 SSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALN 166 A G++ + + + +A L G + P Sbjct: 643 GHAVGDVVLREVAGRLSDFAGPDDILARLGGDEFL---------LVLPGADERAASEVAA 693 Query: 167 LNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRL 226 LT IG + ++ D+ + + K G T +L Sbjct: 694 CILTAMSVPVRVDGRELPTTPTIGVSLYPRDGEEADDLIRNADIAMYQAKARGRN-TFQL 752 Query: 227 YADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVD 286 Y D + R++ E+ A R + + YQP +D Sbjct: 753 YTPDMNAAA-----------------------AERLQLQGELRNAHLRGEIMLHYQPQID 789 Query: 287 TQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVL 346 V G E L+RW+HP G + P FI AE +I+ L R A ++ Sbjct: 790 VTDGHVVGCEALMRWKHPTLGMVSPGRFIPLAEESGLIITLGNWAIREACRQAMVWQRAG 849 Query: 347 PVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAW 405 + +N++ +F A + L + LE+TE ++ + E Sbjct: 850 LPPLTVAVNLSGCQFQQSNFTAVVADALADTSLPPQYLELELTESIVMHDVEQVIATLTE 909 Query: 406 LHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKR 465 L ++GV+++IDDFGTG+S+L YL+RF +D LKID+GF+ + T+ + ++ A++ L K Sbjct: 910 LKALGVQLSIDDFGTGYSSLNYLKRFPVDLLKIDQGFVRDVETDPSDAAIVRAIIALGKI 969 Query: 466 LNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTP 516 LN+ +AEGVET Q +L GV+F+QGY+ SRPLP +D +L + P Sbjct: 970 LNLRLIAEGVETQGQLDYLHAAGVDFIQGYYFSRPLPAEDMATYLAQRLLP 1020 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 96/343 (27%), Positives = 165/343 (48%), Gaps = 10/343 (2%) Query: 178 RQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVW 237 E + I + S + R++ + + + LY +D + Sbjct: 519 GDEFIILLENIEHSEQASLSAERVVQAMRRPFRLGEHEHFCNVSIGISLYPEDDEHPEDL 578 Query: 238 YAFLLGGM-SGTVVGLLCYYLMS--------VRMRPGREIMTAIKREQFYVAYQPVVDTQ 288 M G Y + R+ ++ A++ QF V YQP +D + Sbjct: 579 VRHADSAMYLAKAQGGAGYRFYTPDMNTRAMERLLLQNQLHQALELGQFQVHYQPQMDLR 638 Query: 289 ALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPV 348 + R+ G+E L+RW+HP G +PP FI AE +I PL + + AR+ + Sbjct: 639 SGRICGVEALVRWQHPERGLVPPAEFIPMAEDTGLIEPLGEWVLRTAAREVRGWQDRGLP 698 Query: 349 GVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLH 407 + +N++P ++++L ++ LEITER ++ + E + + Sbjct: 699 ALNLSVNLSPRQFRHPDLPGMVERVLAESGLEAERLELEITERLIIVDLEHTVDTLSRIA 758 Query: 408 SVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLN 467 +GV ++IDDFGTGHS+L YL+R + LKIDR F++ IG ++ + + +AV+ L + L Sbjct: 759 RLGVRVSIDDFGTGHSSLAYLKRLPVHALKIDREFVDGIGQDSDDAAIAEAVIALGRTLR 818 Query: 468 MLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 + +AEGVET EQA +L E G + +QG++I+RP+P + WL Sbjct: 819 LQVIAEGVETREQASFLREHGCDAVQGFFIARPMPAGELTGWL 861 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 76/252 (30%), Positives = 138/252 (54%), Gaps = 1/252 (0%) Query: 262 MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQ 321 + + A+ + V +QP V+ + R+ G E L+RW+HP G I P FI AE Sbjct: 633 LALEGALRQAVDKNHLVVYFQPQVELASRRIIGAEALVRWQHPENGMISPVDFIPMAEET 692 Query: 322 KMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHH 381 +IV + + + A + + ++ +N++ + ++++L Sbjct: 693 GLIVSIGEWVLRQSCLQARQWQVAGYPPMRISVNMSARQFRQKDLVPMVRRILQETGLSP 752 Query: 382 FQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDR 440 + LEITE ++ + + A + LHS+G++++IDDFGTG+S+L YL++F + YLKIDR Sbjct: 753 EYLDLEITESILMNDVDGAVERLVELHSLGIQLSIDDFGTGYSSLAYLKKFPIQYLKIDR 812 Query: 441 GFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRP 500 F+ + + + + AV+ LA+ +N+ +AEG+E +Q ++L +RG + QGY SRP Sbjct: 813 SFVRDVIIDPNDAAIATAVIDLARNMNLNVIAEGIEQQDQHQFLLDRGCGYGQGYLFSRP 872 Query: 501 LPLDDFVRWLKK 512 +P +F + L + Sbjct: 873 IPAHEFEQLLVR 884 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 78/251 (31%), Positives = 128/251 (50%), Gaps = 1/251 (0%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+ + A++ ++ + YQP V + RV G E L+RWRHP G + P FI AE Sbjct: 827 RLELENSLRRALENDELELHYQPKVSLRDGRVIGAEALIRWRHPQLGMVSPADFIPLAEE 886 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +IVP+ + + + R + +N++ E + + L + Sbjct: 887 TGLIVPIGEWVVDHACRQLRAWLDAGLPQISVAVNVSARQFQHEQLTHVLARALAAHRLP 946 Query: 381 HFQIVLEITERDML-KEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 Q+ +E+TE ++ + + L ++GV I++DDFGTG+ +L YL+RF +D +KID Sbjct: 947 PGQLHVEVTESAVMCEPERTIFTLRELKNIGVRISLDDFGTGYCSLNYLKRFPIDSIKID 1006 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 R F+ + T + + +++LA LN +AEGVE Q +L G + MQG+ SR Sbjct: 1007 RCFVTDLATSAEDAAIALMIVSLAHSLNQTVIAEGVENEAQLDFLRRHGCDEMQGFLFSR 1066 Query: 500 PLPLDDFVRWL 510 PLP +F R L Sbjct: 1067 PLPAAEFARLL 1077 >UniRef50_D2TJN3 Putative exported protein n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TJN3_CITRO Length = 513 Score = 417 bits (1073), Expect = e-115, Method: Composition-based stats. Identities = 148/506 (29%), Positives = 231/506 (45%), Gaps = 10/506 (1%) Query: 16 CIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDT 75 +++ + ++ L F+V+ + + ++ A T + L Sbjct: 8 LMLSIFIPLGIMISLAFVVSTLILKQDISISGKTLLRFSSDMSAVSWRATKKAALLVNRR 67 Query: 76 CQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAIL 135 C LT AF+ +R ++++ + CS +GE P ++L + IL Sbjct: 68 CPDMLDALTRTRAFTPYIRDIGVLENGEMTCSFVSGEKRQPFSQLSGLTLPALLPERMIL 127 Query: 136 PGTPMV--PNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTA 193 M P++P I+ Y + VF ++ L E L +GN Sbjct: 128 VAKRMAEGPDRPVIL--YAEKISAQKAVFTIVDSQYIQELMDILAAERSSVFRLTMGNGN 185 Query: 194 LSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLL 253 LT + + W F+L + + + +L Sbjct: 186 AIVSGVDSGEKPFLTQRFTSANGDIHLRVETSFSTLSAWWLQNLLIFILLSLCFSFLFVL 245 Query: 254 CYYLMSVR-MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPD 312 Y + + GREI I +F V YQPV + G E LLRW P I PD Sbjct: 246 LYRRWRQKSLSLGREIERGIANNEFQVHYQPVFNVGRSACGGAEALLRWPQPHGRFISPD 305 Query: 313 AFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQK 372 FI AE++ IV LT+HLF+LIA+D + + +P G +NIAP+HL S+ F +D+ Sbjct: 306 IFITAAENEGKIVALTRHLFDLIAKDVSRWK--VPEGFYISVNIAPEHLISDDFVSDVMA 363 Query: 373 LLTSLPAHHFQIVLEITERDML-KEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERF 431 L L ++LE+TER ++ + + + L S VEIAIDDFGTG+ +L YL++ Sbjct: 364 LKERL--AKLGLILELTERSLIAEPAKVSAKLELLRSQQVEIAIDDFGTGYCSLSYLQQL 421 Query: 432 TLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNF 491 DYLKIDR FIN I T P+LD ++TL++ L + VAEGV + Q R++ ++GVN+ Sbjct: 422 PADYLKIDRTFINTIDTSGSDVPILDTIITLSQNLGLQVVAEGVSSKHQLRYILDQGVNY 481 Query: 492 MQGYWISRPLPLDDFVRWLKKPYTPQ 517 +QGY +RP+ DF+ WL K Q Sbjct: 482 IQGYLYARPMSSADFMVWLDKDVQQQ 507 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 417 bits (1073), Expect = e-115, Method: Composition-based stats. Identities = 85/251 (33%), Positives = 136/251 (54%), Gaps = 2/251 (0%) Query: 262 MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQ 321 + + A+++ +F + YQP V+ R+ G E LLRWRHP G IPP FI AE Sbjct: 984 LEMENSLRQALEKNEFQLYYQPKVEHATGRIIGCEALLRWRHPQRGMIPPSEFIPLAEET 1043 Query: 322 KMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHS-ESFKADIQKLLTSLPAH 380 +IV + + R + E + +NI+ + E+ ++ L Sbjct: 1044 GLIVQIGHWVLAEACRQSKIWETEGLPPLTMAVNISARQFYQGENLIQAVKSTLERSQLV 1103 Query: 381 HFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 Q+ LE+TE ++K+ A + + +GV +++DDFGTG+S+L YL F +D LKID Sbjct: 1104 PSQLELELTESMVMKDAVNAERTMRKIKQLGVSLSLDDFGTGYSSLNYLRSFPVDSLKID 1163 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 R FI I ++ ++ +L++++ +A L + TVAEGVE +Q ++ G N++QGY SR Sbjct: 1164 RSFILDIASDASSAAILNSIIAIAHTLGLQTVAEGVENNDQLALVANCGCNYIQGYLFSR 1223 Query: 500 PLPLDDFVRWL 510 PLP +DFV Sbjct: 1224 PLPPEDFVALF 1234 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 98/350 (28%), Positives = 154/350 (44%), Gaps = 14/350 (4%) Query: 181 DYDGVALIIGNTALSTFS----SRLMNVNELTDMPVRETKIAGIPLTVRLYADDW----- 231 D +II A S ++++V + + V LY +D Sbjct: 513 GGDEFTIIIDEIATPADSLLVAEKILHVFSAPFRLEKHEMFITASMGVTLYPNDGDTAEK 572 Query: 232 TWNDVWYAFLLGGMSGTVVGLLCYYLM----SVRMRPGREIMTAIKREQFYVAYQPVVDT 287 + A G M S R+ + A+ R +F + YQP V+T Sbjct: 573 LLKNADTAMYHAKEEGRNTYQFFSEEMNSRVSERLSMETGLRHALARNEFLLHYQPRVNT 632 Query: 288 QALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLP 347 R+ G+E L+RW+ P G I PDAFI AE +I+P+ + + A ++ Sbjct: 633 TTGRIVGVEALIRWQQPQKGLILPDAFIPLAEETGLIIPIGEWVLRNTCTQARAWQEAGF 692 Query: 348 VGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWL 406 ++ +NI+ ++ I+ +L + LEITE ++ E A L L Sbjct: 693 AQMRISVNISCRQFTHDNLPDTIRGILRETGLQPSCLELEITESVIMLNPERAISLLNEL 752 Query: 407 HSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRL 466 +G+ IAIDDFGTG+S+L L+R D LKID+ F++ I ++ ++ L + Sbjct: 753 KEMGISIAIDDFGTGYSSLSLLKRLPADILKIDKSFVSGIPGNKSDETLVATIINLGHNM 812 Query: 467 NMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTP 516 + VAEGVE EQ +L ER +QGY+ S+PLP + LK P Sbjct: 813 GLGLVAEGVERQEQLHFLEERNCQEVQGYYFSKPLPAETLQPLLKNGTYP 862 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 94/332 (28%), Positives = 149/332 (44%), Gaps = 10/332 (3%) Query: 183 DGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYAD-DWTWNDVWYAFL 241 D ++ + RL + + + + G+ L R D + + A Sbjct: 358 DLASIEDAARLAAKLRDRLSESVRIGSLELPLSASIGVALAPRDGRDPEMLLKNADIAMY 417 Query: 242 LGGMSGTVVGLLCYYL------MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGL 295 G C+Y R+ E+ A+ + YQP VD +TG Sbjct: 418 RAKERGR--NNYCFYGPEMDHHARRRLTVESELRRALAGGELEAHYQPQVDLATGALTGA 475 Query: 296 EVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGIN 355 E L+RWRHP + P FI AE +IVPL + + R + + +K +N Sbjct: 476 EALVRWRHPERCLLLPGEFIAVAEETGLIVPLGEQVLRAACRQSTRWREAGRPDLKVAVN 535 Query: 356 IAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIA 414 ++ + +L AH Q+ LEITE + + + + A L G+ +A Sbjct: 536 LSGHQFRQHDLVEQVCDILAETGAHAAQLELEITESVAMADADGSVATLAGLRRQGIALA 595 Query: 415 IDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEG 474 IDDFGTG+S+L YL+RF +D LKIDR FI I + + ++ A++ +A+ L + +AEG Sbjct: 596 IDDFGTGYSSLSYLKRFPIDTLKIDRSFIQGIPADGDDTAIVQAIIAMARSLRLSLLAEG 655 Query: 475 VETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 VETP Q +L +G QG+ R +P +DF Sbjct: 656 VETPAQREFLVAQGCRSGQGFLFGRAMPAEDF 687 >UniRef50_C6ML43 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter sp. M18 RepID=C6ML43_9DELT Length = 773 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 88/352 (25%), Positives = 155/352 (44%), Gaps = 10/352 (2%) Query: 168 NLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLY 227 +L + + + + GN + L + + + + + +Y Sbjct: 280 RQVDTLAHQGGDKFVVVLTDLRGNEEADRAVHVIREAISLPFLMDGQELVISCSIGITVY 339 Query: 228 ADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMSV--------RMRPGREIMTAIKREQFY 278 D M G C+ + RM + + A++ E+F Sbjct: 340 PKDGEDAQTLVKNAEVAMYRAKEQGRNCFRYYTRELNERVASRMSMEKHLRKALENEEFE 399 Query: 279 VAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARD 338 + YQP D R++G+E L+RWR+ G + P +FI AE +IV + + + Sbjct: 400 LWYQPQADLNTGRLSGMEGLIRWRNAELGMVQPGSFIPLAEETGLIVQIGEWVVRTACLQ 459 Query: 339 AAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE 398 + + +N++P I +L + LEI E ++ + E Sbjct: 460 NRRWQDAGLSPLTVAVNLSPRQFRDRELTGVIAGVLRETGLDPRYLGLEIVESMVMHDVE 519 Query: 399 -ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLD 457 A + L ++GV++++DDFGTG+S+L YL+RF LKID F+ I T+ ++ + Sbjct: 520 SAAAMLNELKALGVKLSMDDFGTGYSSLSYLKRFPFAKLKIDLSFVRDIMTDPGSAAIAK 579 Query: 458 AVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRW 509 +++++A LN+ VAEGVET Q +L G N +QGY++SRPLP +F Sbjct: 580 SIISMAHNLNLSVVAEGVETEGQLEFLRAHGCNEIQGYYLSRPLPAAEFEGM 631 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 416 bits (1071), Expect = e-115, Method: Composition-based stats. Identities = 82/242 (33%), Positives = 130/242 (53%), Gaps = 1/242 (0%) Query: 275 EQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFEL 334 +F + YQP VD + +V G+E L+RW P G IPP FI AE +I PL++ + Sbjct: 790 NEFLLHYQPQVDIETGQVVGMEALVRWHDPEVGLIPPSQFIPVAEESGLIGPLSEWVLRE 849 Query: 335 IARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDML 394 R + + +N++ + ++L + LE+TE ++ Sbjct: 850 ACRQNKAWQDEGLPPARVSVNLSARQFQQRDIAKLVMQVLEETGLDPQYLELELTESTIM 909 Query: 395 KE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITS 453 + +EA + LH++G+ +AIDDFGTG+S+L YL+RF +D LKIDR F++ IG + Sbjct: 910 RNAEEAVSMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGESSDDE 969 Query: 454 PVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKP 513 + A++ LA LN+ +AEGVET Q +L ER + MQGY+ ++PLP L++ Sbjct: 970 TITSAIIALAHSLNLQVIAEGVETSTQLDFLKERACDEMQGYFFAKPLPHHAIPGMLQRG 1029 Query: 514 YT 515 Sbjct: 1030 SQ 1031 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 416 bits (1071), Expect = e-115, Method: Composition-based stats. Identities = 90/333 (27%), Positives = 157/333 (47%), Gaps = 10/333 (3%) Query: 190 GNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSG-- 247 A++ R+++ + + L DD + M Sbjct: 367 NEEAITHTMQRVLHEVSQPWKANDLEFQITCSIGLTLCPDDGRDAETLLKNADSAMYKAK 426 Query: 248 -TVVGLLCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLR 300 Y+ + R+ + AI E F + YQP V + ++ G E L+R Sbjct: 427 ELGRNNFQYFSAEMNSSVTDRLELLNRLRQAITNEDFVLHYQPKVSLASHQIIGAEALVR 486 Query: 301 WRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDH 360 W +G + P +FI AE +I+PL + + R + + +N++P Sbjct: 487 WNSAHSGMVSPASFIPLAEETGLIIPLGEWVLRTACRQNRAWQDAGYPPIPISVNLSPRQ 546 Query: 361 LHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFG 419 L ++++LT + LEITE M + E + L L S+GV+I++DDFG Sbjct: 547 LARGDIVEVVERILTETGLEAQHLELEITESVMTTDVEKSFALLTQLRSLGVKISLDDFG 606 Query: 420 TGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPE 479 TG+S+L YL+RF +D LKID+ F+ I T+ ++ ++ A+++L + LN+ +AEG+ET + Sbjct: 607 TGYSSLSYLKRFPVDTLKIDQSFVRDIATDQDSAAIVKAIISLGRNLNLTVLAEGIETED 666 Query: 480 QARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 Q ++L G + QGY +S+P+P +FV L + Sbjct: 667 QFQFLLANGCDEGQGYLMSKPVPNKNFVDLLTQ 699 >UniRef50_A1SZV0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZV0_PSYIN Length = 711 Score = 416 bits (1071), Expect = e-115, Method: Composition-based stats. Identities = 84/258 (32%), Positives = 127/258 (49%), Gaps = 1/258 (0%) Query: 257 LMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFIN 316 + R+ + AI ++ V YQP +D R+ G E LLRW G + P FI Sbjct: 448 VAKRRLELESFLRHAIDNKELSVNYQPQIDIPTGRIIGAEALLRWNSAELGMVSPVEFIP 507 Query: 317 FAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTS 376 AE +I P+ + + R E ++ +NI+ +S + K+L Sbjct: 508 IAEETGLISPIGEWVLREACRQVKEWRDDGLPEIQIAVNISVQQFAKQSLDKLVSKVLLE 567 Query: 377 LPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDY 435 + LEITE ++ + E A + L +G+ +AIDDFGTG+S+L YL+RF +D Sbjct: 568 TGLPVHCLELEITENMLMDDVEGAVETLHKLKDLGINLAIDDFGTGYSSLSYLKRFPIDK 627 Query: 436 LKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGY 495 LKIDR FI + TE + V A++++A L + +AEGVE Q +L + MQGY Sbjct: 628 LKIDRSFITYVTTEPSDAAVTQAIISMAHNLGLTVIAEGVEEASQLEFLRQHHCEEMQGY 687 Query: 496 WISRPLPLDDFVRWLKKP 513 + SRPL D L+ Sbjct: 688 YFSRPLIASDMEALLRSH 705 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 90/318 (28%), Positives = 149/318 (46%), Gaps = 10/318 (3%) Query: 204 VNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMS--- 259 + + +P I G + + LY + M G C+ S Sbjct: 776 LKDPFSLPNGREVIIGASIGISLYPEHGQTPKELLQQADAAMYRAKAHGRSCFRYFSDEL 835 Query: 260 -----VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAF 314 R+ + A++ + + +QP +D + R+ G E L+RW+ P G I P F Sbjct: 836 TRAAEQRLDLEVRLQRALRLNELCLYFQPQIDISSNRIIGAEALVRWQDPAHGLISPAQF 895 Query: 315 INFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLL 374 I AE +I L + + R E ++ + +NI+P + + + L Sbjct: 896 IPVAEETGLIKQLGEWVLLEACRQGKEWQQKGLPAINLAVNISPVQFRNSNILESVFNAL 955 Query: 375 TSLPAHHFQIVLEITERDML-KEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTL 433 + LE+TE ++ E EA ++ + L G+ +AIDDFGTG+S+L YL+RF L Sbjct: 956 KQTGYPASLLELELTESALMTHENEAVEILSALRKYGIRLAIDDFGTGYSSLAYLKRFPL 1015 Query: 434 DYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQ 493 D LKID+ F++ I + + A++ +A L + +AEGVET EQ +L E+G + Q Sbjct: 1016 DVLKIDKSFVDDIPHKKDDMEIAAAIVAMAHTLRLKVLAEGVETEEQLTFLKEQGCDCYQ 1075 Query: 494 GYWISRPLPLDDFVRWLK 511 GY +S P+P D F + L+ Sbjct: 1076 GYLMSPPVPADQFEQLLR 1093 >UniRef50_Q1JWP9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWP9_DESAC Length = 956 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 92/355 (25%), Positives = 161/355 (45%), Gaps = 13/355 (3%) Query: 169 LTPSLFYSSRQEDYDGVALIIGN--TALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRL 226 LT ++ LI G+ + F+ ++ + + + I + + Sbjct: 595 LTCDHSSLAKDSGSQFFLLIEGDPKEVVFDFADEVLTEVKQSFFANGQELIPSGSIGIAF 654 Query: 227 YADDWTWNDVWYAFLLGGMSGTV--VGLLCYYLMSVR--------MRPGREIMTAIKREQ 276 Y D A M + +G + + +R ++ A++ Q Sbjct: 655 YPDHAENATELLARADVAMRLSKDDMGGGAVMVYDPKYGEVAPQSLRMEADLKHALENNQ 714 Query: 277 FYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIA 336 ++ YQP D + + G+E L+RW HP G + P FI AE +I PL + + Sbjct: 715 LHLHYQPQFDLKNAGLVGVEALIRWNHPTEGPVSPGEFIPLAEETGLIHPLGRWVLREAC 774 Query: 337 RDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKE 396 R A + V +N++ L +F +++ L I LEITE ++ Sbjct: 775 RQAKFWQNNFARIVPVAVNVSSLQLKKNNFVHVLEECLNEFQIDPQLIELEITESAVMDR 834 Query: 397 QE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPV 455 E + +L + +G +AIDDFGTG+S+L YL++F LKIDR F+ + T+ + + Sbjct: 835 LEKSMELLNAIKGLGFNLAIDDFGTGYSSLSYLKKFPFSKLKIDRSFVMDLETDENDAAI 894 Query: 456 LDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 + A++++A L + T+AEGVET EQ +L++ G + +QG+ +SRPL D Sbjct: 895 ITAIISMATSLGLKTIAEGVETVEQKHFLTDHGCDEVQGFLLSRPLSADAIEEMY 949 >UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiatoa sp. PS RepID=A7BQZ3_9GAMM Length = 576 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 80/310 (25%), Positives = 149/310 (48%), Gaps = 10/310 (3%) Query: 213 RETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMSV--------RMR 263 + + + +Y D + M+ G Y R+ Sbjct: 257 HHEMVVTASIGISVYPSDGEEAAILLKNADTAMARAKAAGKNTYQFFKAEMNKAAFERLM 316 Query: 264 PGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKM 323 ++ + + + YQP ++ + ++ G+E LLRW+HP G P F+ AE + Sbjct: 317 LENQLRKVLSNNELILYYQPQIELSSGQLVGMEALLRWQHPEFGICSPVKFVPVAEEMGL 376 Query: 324 IVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQ 383 IVP+ + + + +++ V+ +N++ ++ I++ L + Sbjct: 377 IVPIGEWVLRTACQQNQTWQQLGFPPVRVSVNVSSRQFFRDNLLQIIKEALADSNLNPIY 436 Query: 384 IVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGF 442 + LE+TE ++ E+ +L + ++GV IAIDDFGTG+S+L YL+RF LD LKIDR F Sbjct: 437 LELELTESVLMAEESGIFELLTEVQNMGVHIAIDDFGTGYSSLSYLKRFPLDVLKIDRSF 496 Query: 443 INAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 + I ++ + + A++ +A L + VAEGVET Q +L ++ + +QGY+ SRP+ Sbjct: 497 VKDICSDGNDAAITTAIIAMAHSLGLSVVAEGVETQGQLTFLQQQHCDVIQGYYFSRPIC 556 Query: 503 LDDFVRWLKK 512 + + L++ Sbjct: 557 SEKMTQTLQR 566 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 77/252 (30%), Positives = 129/252 (51%), Gaps = 1/252 (0%) Query: 259 SVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFA 318 S ++ + A+KR + + YQP + T ++ G E LLRW HP G I P FI A Sbjct: 690 SRNLQLENALRHALKRNELQLYYQPQISTSNGQIIGAEALLRWHHPELGMISPAEFIPIA 749 Query: 319 ESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLP 378 ES I+ + + + R + +N++ ++ I +L + Sbjct: 750 ESSGQIIEIGEWVLRTAIRQTKNWMDDGFTPMIIAVNLSVVQFRQKNLLTLITDILAEVQ 809 Query: 379 AHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLK 437 + + LE+TE + + E + H G+ ++IDDFGTG+S+L YL++F + LK Sbjct: 810 LPNEYLELELTEAVTMHDPESVINVMNTFHEQGIRMSIDDFGTGYSSLSYLKKFKVYKLK 869 Query: 438 IDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWI 497 ID+ FI I + ++ A++ +A L + T+AEGVET EQ +L G + +QGY+ Sbjct: 870 IDQSFIRDISNDPDDRAIVSAIIDMASNLGLQTIAEGVETAEQLAFLRLHGCHEVQGYYF 929 Query: 498 SRPLPLDDFVRW 509 S+PLP +F ++ Sbjct: 930 SKPLPSVEFEQF 941 >UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8G6_SPHTD Length = 760 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 90/279 (32%), Positives = 137/279 (49%), Gaps = 3/279 (1%) Query: 235 DVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTG 294 + A LLG V Y R+ R++ ++R +F + YQPV+D + R Sbjct: 467 AMHRAKLLGKARRVVFDPAMYAQAVERLALERDLRHGLERGEFQIYYQPVLDVRTRRPVE 526 Query: 295 LEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLP--VGVKF 352 +E L+RW HP G I P FI AE +IVPL + R A P Sbjct: 527 VEALVRWHHPERGLISPGEFIPIAEETGLIVPLGHWVLAEACRQLAAWRTAFPDCAPSAV 586 Query: 353 GINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGV 411 +N++ S ADI ++L + LEITE M+ + +T + L +GV Sbjct: 587 SVNLSARQFRHPSLTADIAQILAETGLPPASLKLEITESVMMDDTASTLEALRDLKQLGV 646 Query: 412 EIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTV 471 ++A+DDFGTG+S+L YL+RF D +KIDR F + +++A++ A L + Sbjct: 647 QLAVDDFGTGYSSLSYLKRFPTDAMKIDRSFARGLDQSREDQALVEAMIAAANALRLQVT 706 Query: 472 AEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 EGVET EQ +L G + +QG+ + P+P D+ R+L Sbjct: 707 VEGVETEEQLEFLERVGCDLVQGFLFAPPMPPDEVARFL 745 >UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT6_BREBN Length = 816 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 73/247 (29%), Positives = 127/247 (51%) Query: 262 MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQ 321 + R++ AI+R++ V YQP +++ R+ G+E L+RW HP G + P FI AE Sbjct: 556 IEIERDLRKAIERKELVVYYQPQFHSESNRMIGVEALVRWNHPTKGMLSPGVFIPIAEET 615 Query: 322 KMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHH 381 +I + + R + + +N++ H + I+ +L Sbjct: 616 GLIYEIGTWVLREACRQMKQWHDKGGPLIPVSVNLSSHQFHQRNLVQYIKNILEETKLAP 675 Query: 382 FQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRG 441 + LEITE M+ + + L+ +G I++DDFGTG+S+L YL++F + LKIDR Sbjct: 676 HFLELEITESMMMDPAVSISILHELNKIGTRISLDDFGTGYSSLSYLKKFPIHKLKIDRS 735 Query: 442 FINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPL 501 FI + ++ ++++AK L + +AEG+ET +Q L+E +QGY+ SRPL Sbjct: 736 FITDLSRNENDKAIVATIISMAKHLKLDVIAEGIETKDQLDILTENHCKEIQGYYYSRPL 795 Query: 502 PLDDFVR 508 ++ + Sbjct: 796 SANEVEQ 802 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 93/335 (27%), Positives = 154/335 (45%), Gaps = 10/335 (2%) Query: 187 LIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDW-TWNDVWYAFLLGGM 245 L A + S L + + +P + G + + LY DD T D+ + Sbjct: 728 LQRPEDAAAVAESLLSLLQQPFHLPNGQELYVGASIGISLYPDDGHTVTDLIQHADVAMY 787 Query: 246 SGTVVGLLCYYLM--------SVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEV 297 G Y R+ + A+ E+F + YQ +D + R+ G E Sbjct: 788 QAKEEGRNTYRFYTPSLTQTARERLGLEARLHRALASEEFVLHYQAQIDMRDGRLIGCEA 847 Query: 298 LLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIA 357 L+RW G + PD FI AE +IVPL + + D + +N++ Sbjct: 848 LVRWHSATEGLVAPDRFIPLAEETGLIVPLGEWVLRQACADCQSWRARGLTDLTVAVNLS 907 Query: 358 PDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAID 416 L S + ++L ++ LE+TE ++ ++E A + L ++GV ++ID Sbjct: 908 GRQLRSPDLVERVTRVLRETGLPAERLKLELTESMIMDQREQALERLRALKALGVRLSID 967 Query: 417 DFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVE 476 DFGTG+S+L YL+R +D LKIDR F+ I ++ + ++ +A+ L + +AEGVE Sbjct: 968 DFGTGYSSLAYLKRLPIDELKIDRDFVRDIPEDSSDMEIAATIIAMARNLRLNVIAEGVE 1027 Query: 477 TPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 TPEQ +L +G QGY RPLP + F + ++ Sbjct: 1028 TPEQCDFLIRQGCTAGQGYLFGRPLPAEAFAQVMR 1062 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 414 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 102/334 (30%), Positives = 163/334 (48%), Gaps = 11/334 (3%) Query: 194 LSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDW-----TWNDVWYAFLLGGMSGT 248 LST + ++ V + I L + +Y D + A +G Sbjct: 743 LSTLAEDILAVLAQPLWLEGQELIVTGSLGISVYPHDGSDARTLLKNADVAMYRAKEAGK 802 Query: 249 VVGLLCYYLMSV----RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHP 304 M+ R++ R + A++R +F + +QP+V R+ LEVLLRWRHP Sbjct: 803 NTYQFFAAEMNAQAIERLQLERGLRQALERGEFELHFQPIVAAATYRLEALEVLLRWRHP 862 Query: 305 VAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSE 364 G + P FI AE +I P+ + R AE + + + IN++ + Sbjct: 863 ELGLVSPVRFIPLAEETGLIRPIGDWVIRQACRQLAEWDCLGLHVPRLAINLSARQFEQQ 922 Query: 365 SFKADIQKLLTSLPAHHFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHS 423 + L ++ LE+TE +++ EA L L ++GV ++IDDFGTG+S Sbjct: 923 GLIMQVAGALAEAGIAAGRLELEMTESMVMQNPSEAVSLLGELKALGVRLSIDDFGTGYS 982 Query: 424 ALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARW 483 +L YL+RF LD LKIDR FI + + + + +A+L +A++L+ VAEGVET QA + Sbjct: 983 SLSYLKRFPLDTLKIDRSFIEGLPGDGDNAAIAEAILAMARKLSFSVVAEGVETEAQAAF 1042 Query: 484 LSERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQ 517 L +G +QGY SRPLP + +L++ +PQ Sbjct: 1043 LCAKGCQLLQGYLFSRPLPAAELPAFLQQ-RSPQ 1075 >UniRef50_A0KH05 EAL domain protein n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KH05_AERHH Length = 513 Score = 414 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 145/521 (27%), Positives = 229/521 (43%), Gaps = 18/521 (3%) Query: 2 FIRAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADL 61 F+R N R LL ++ + ++ + W + T +D+ Sbjct: 5 FLRRSNMPR--LLASLLCCATLILISLVTLYWQTWSMTRQQAQTAAERAMTQIDSALHHS 62 Query: 62 KSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELI 121 PL C++ EL A S VR+ L ++ + +CSS E+D + Sbjct: 63 TLAAKAALPLASRPCREVARELRVLVATSPYVRSVNLSRNGRLYCSSIFDEID------L 116 Query: 122 PALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQED 181 N ++ L + KP+++ ++ + ++ V A +L+ L + Sbjct: 117 KDRLQNSQHELLRLEAVTQLGRKPSLLFYHLSE-GDHAVVVAINPYHLSKPLQWHLA--- 172 Query: 182 YDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVR-----LYADDWTWNDV 236 + IG L A ++ T Sbjct: 173 GPHSWVQIGEQWLDLQGKVHDGQPPRLRGFNYRLDSATFGYSLNQGFPLSAVLAMTLQKQ 232 Query: 237 WYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLE 296 LL G + GL Y S P +E+ AI +++F QP+V +Q ++ G E Sbjct: 233 GSMVLLILALGGLAGLATYRWWSHISTPTQELRRAIIKQEFVPYLQPIVVSQNGQLHGCE 292 Query: 297 VLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINI 356 VL+RW+H G I PD FI AE +I+ +TQ L + + A LP F NI Sbjct: 293 VLMRWQHHRQGLIRPDLFIPLAEESGLIILMTQTLMQQVRLQFAPHAAALPPRFHFSFNI 352 Query: 357 APDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLF-AWLHSVGVEIAI 415 H S D + L + A+ +VLE+TER+++ T+ L +GV I + Sbjct: 353 CARHCQQLSLLDDCRSFLAAFTANPITLVLELTERELITPNHLTERLFEELRQMGVRIGL 412 Query: 416 DDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGV 475 DDFGTGHS+L YL++F +DYLKID+ F+ IGT ++ +LD+ ++LA RL + T+AEGV Sbjct: 413 DDFGTGHSSLTYLQQFHVDYLKIDQSFVAMIGTNALSRHILDSTISLATRLGLQTIAEGV 472 Query: 476 ETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTP 516 ET EQA +L ER V+++QGY RPL F++ L P Sbjct: 473 ETQEQADFLVERQVDYLQGYLYGRPLTPQQFLQQLSPTPAP 513 >UniRef50_B7HSZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=5 Tax=Bacillus cereus group RepID=B7HSZ4_BACC7 Length = 925 Score = 414 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 86/322 (26%), Positives = 159/322 (49%), Gaps = 12/322 (3%) Query: 199 SRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV-VGLLCYYL 257 +R+++ V + + ++ D+ ++ M + + Y+ Sbjct: 606 NRVIDSFSRPFHLVDNEIYMKTSIGISIFPDNGDTTEILVKNADTAMYKSKEISGSSYHF 665 Query: 258 MSVRM--------RPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEI 309 S M + ++ A+++E+ + YQP ++ + ++ G+E L+RW H G I Sbjct: 666 FSEGMDTRTFESIKLENDLYKALEQEELVIYYQPQINGKTNKIEGVEALIRWNHQEHGMI 725 Query: 310 PPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKAD 369 PPD FI AE +IVP+ + + + R + + +N++ L A Sbjct: 726 PPDKFIPIAEETGLIVPIGEWVLKEACRQLKKWHDQGSPLISMSVNLSARQLEQSDLFAM 785 Query: 370 IQKLLTSLPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYL 428 ++ +L + I LE+TE +++ E+T + L +G+ +AIDDFGTG+S+L YL Sbjct: 786 VKNVLEEVELSPKYIQLELTENLIVRNTESTLKTMKKLKGLGINLAIDDFGTGYSSLGYL 845 Query: 429 ERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERG 488 ++ + LKID+ F+ + + + + + ++TLAK LN+ +AEGVET EQ +LS R Sbjct: 846 KKLPISTLKIDKSFVQDMTKD--DAAITNTIITLAKNLNLDVIAEGVETKEQVEFLSARN 903 Query: 489 VNFMQGYWISRPLPLDDFVRWL 510 MQGY+ SRP+ +D + Sbjct: 904 CYLMQGYFFSRPMAAEDIEKLF 925 >UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Proteobacteria RepID=Q21WW2_RHOFD Length = 874 Score = 414 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 92/370 (24%), Positives = 155/370 (41%), Gaps = 31/370 (8%) Query: 154 PLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVR 213 P +G + L +L + V IG S ++ D + Sbjct: 520 PETNAAGAAHIAEMLLQSALVAFELEPHELTVTPSIGIALFPGDGSDFDTLSRCADAAMY 579 Query: 214 ETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIK 273 K G Y F M + + A++ Sbjct: 580 RAKKDGRNN---------------YRFFTAEMQAR---------SERTLTLENALRRALE 615 Query: 274 REQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFE 333 R Q + YQP + + RV G E LLRW HP G +PP FI AE+ +I+P+ + + Sbjct: 616 RNQLQLHYQPQISLASGRVVGAEALLRWSHPELGAVPPAEFIPVAETCGLILPIGEWVLR 675 Query: 334 LIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDM 393 + + + +N++ + +L + LE+TE Sbjct: 676 TSVQQLKAWIDAGMLPIALSVNLSSVQFRHADLPELVTSILNEAQLPAHLLELELTENVA 735 Query: 394 LKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETIT 452 + + A + LH GV ++IDDFGTG+S+L YL++F + +KID+ F+ I ++ Sbjct: 736 MTDPLGAIAVMNNLHERGVRMSIDDFGTGYSSLSYLKKFRVYKIKIDQSFVRDITEDSDD 795 Query: 453 SPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL-- 510 ++ A++++A L M T+AEGVET Q +L +G +QGY+ SRPLP++ F ++ Sbjct: 796 KAIVGAIISMATSLGMQTIAEGVETEGQLEFLKAKGCTEVQGYYFSRPLPVEQFEAFMGT 855 Query: 511 ----KKPYTP 516 +P+ P Sbjct: 856 KSSSNQPFVP 865 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 414 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 79/336 (23%), Positives = 147/336 (43%), Gaps = 14/336 (4%) Query: 188 IIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADD-----WTWNDVWYAFLL 242 + +++L+ V + + + +Y D A Sbjct: 1063 STDADGAAHVAAKLLEVMAPAYRIEQHELTCSLSAGIAMYPADGESFEALSMSADTAMYR 1122 Query: 243 GGMSGTVVGLLCYYLMSVR------MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLE 296 SG C++ ++ ++ ++ A++ + + YQP R+ G E Sbjct: 1123 AKQSGR--NAYCFFTAEMQERSARNLQIENDLRRALENGELRLHYQPQFTLADRRLVGAE 1180 Query: 297 VLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINI 356 LLRW+HP G + P FI AE +I+P+ + + ++ + +N+ Sbjct: 1181 ALLRWQHPQLGMVSPVEFIPIAEECGLILPIGEWVLRAAVSQLRVWQQEGLPPMTVAVNL 1240 Query: 357 APDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAI 415 + S + ++L + + LE+TE + A L ++GV ++I Sbjct: 1241 SAVQFRQASLTDVVSRILDAEGLAAQFLELELTESVAMDNPLAAIATMDKLRALGVRMSI 1300 Query: 416 DDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGV 475 DDFGTG+S++ YL+RF + LKIDR F+ + + ++ A ++LA+ L + T+AEGV Sbjct: 1301 DDFGTGYSSMSYLKRFRVHKLKIDRSFVADLAADPEDEAIVTATISLARDLGLQTIAEGV 1360 Query: 476 ETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 E+ Q +L +G + QGY SRPL F +++ Sbjct: 1361 ESEAQLAFLRAKGCDEAQGYLFSRPLAPAQFAAFVR 1396 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 94/344 (27%), Positives = 159/344 (46%), Gaps = 15/344 (4%) Query: 189 IGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWT-----WNDVWYAFLLG 243 + +++L+ + + + + +Y DD T + A Sbjct: 660 TDAEGAARVAAKLLEAVAQPLVLDHQELTVTPSIGIAMYPDDGTDFDTLSRNADAAMYQA 719 Query: 244 GMSGTVVGLLCYYLMSVR----MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLL 299 G M R + + A+ R QF + YQP V RV G E LL Sbjct: 720 KREGRNGFRFFTEAMQARSTRTLLLANALRHALDRGQFSLHYQPQVSLADGRVVGAEALL 779 Query: 300 RWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPD 359 RW HP G + P F+ AES +I + + + + + +N++ Sbjct: 780 RWTHPEFGPVSPGEFVPIAESNGLIAQIGEWVLREAVAQSRRWLDEGLPPLVMAVNLSAA 839 Query: 360 HLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDF 418 + + + +++ Q+ LE+TE + + + A ++ L + G+ ++IDDF Sbjct: 840 QFRNPNLPELVSQVIEEAGLPPHQVELELTEAVAMDDPQSAVRVMDALFARGIRMSIDDF 899 Query: 419 GTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETP 478 GTG+S+L YL+RF + LKID+ F+ IG + ++ A++ LA L MLTVAEGVET Sbjct: 900 GTGYSSLGYLKRFKVGKLKIDQSFVRDIGDDPDDKAIVSAIIHLAGSLGMLTVAEGVETL 959 Query: 479 EQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK-----PYTPQ 517 +Q +L ++G + +QGY+ SRPLP + FV +L++ P PQ Sbjct: 960 DQLDFLRQQGCDTVQGYYFSRPLPAEAFVGYLQESGALTPSPPQ 1003 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats. Identities = 103/356 (28%), Positives = 168/356 (47%), Gaps = 11/356 (3%) Query: 173 LFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDW- 231 L E + +I + + R+ +V + + +Y DD Sbjct: 580 LARQGGDEFIILLPVISDPGEAALAAERVRDVFANPIELHNHVLTITPSIGISVYPDDGR 639 Query: 232 ----TWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMR----PGREIMTAIKREQFYVAYQP 283 + A SG ++ R R ++ A++R++F + YQP Sbjct: 640 DYETLVRNADAAMYHAKSSGRNSYKFYTADLNARAREILAIESQLRFALERDEFVLHYQP 699 Query: 284 VVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELE 343 V+ ++ R+ G E L+RW HP G + P FI AE + IV + + R E Sbjct: 700 QVEMESGRIVGAEALIRWNHPSLGLLGPVRFIQVAEERGFIVQIGNWVIAEATRQLVEWR 759 Query: 344 KVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEAT-QL 402 + + IN++ +++ L S + +E+TE ++++ +AT Q Sbjct: 760 RAGLPELTLAINLSALQFRQPDLALQVKQALESSGLPGHALDIEVTESIIMEDAQATIQT 819 Query: 403 FAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTL 462 + ++G+ ++IDDFGTG+S+L YL+RF D LKIDR F+ I + S + A++ + Sbjct: 820 IDNMKNMGLRLSIDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPQDADDSAIARAIINM 879 Query: 463 AKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPY-TPQ 517 AK LNM VAEGVET EQ ++L + G +F+QGY I++PLP DDF L K PQ Sbjct: 880 AKNLNMQVVAEGVETMEQWQFLEQEGCDFVQGYLIAKPLPADDFAELLHKDSLLPQ 935 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats. Identities = 86/259 (33%), Positives = 136/259 (52%), Gaps = 1/259 (0%) Query: 258 MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 ++ RM+ + AI R +F + YQP VD R+ G+E L+RW HP G + P+ FI Sbjct: 595 INERMQMENHLRQAILRNEFELHYQPQVDLGTGRIIGMEALVRWNHPEWGMVHPEKFIRV 654 Query: 318 AESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSL 377 AE +++PL + + R ++ + V +NI+ L S I L+ + Sbjct: 655 AEECNLVIPLGEWVLCEACRQISQWSRQGLEAVCISVNISARQLKSRYLFTLIDNLMMTH 714 Query: 378 PAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYL 436 + LEITE ++ + E L + GV +AIDDFGTG+S+L YL+ L L Sbjct: 715 QIKPGMLELEITESAVMDDPEQTIPRMKELKNKGVALAIDDFGTGYSSLSYLKLLPLTRL 774 Query: 437 KIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYW 496 KIDR F+ I T+ + + A + LA+ L + VAEGVET Q +L +G + QGY+ Sbjct: 775 KIDRSFVKDIETDPNDAAICAATIALARTLGLGLVAEGVETEAQLEYLRAQGCDSAQGYY 834 Query: 497 ISRPLPLDDFVRWLKKPYT 515 S+PLP ++ + ++ + Sbjct: 835 FSKPLPANNIMAFVSRHQQ 853 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats. Identities = 97/403 (24%), Positives = 174/403 (43%), Gaps = 10/403 (2%) Query: 118 NELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSS 177 + A NK V M L ++ + LL+ + + T ++ Sbjct: 414 RAIGQARRHNKRVGMLFLDLDYFKHINDSLGHAVGDQLLQQVAERLIVCIRDTDTVCRQG 473 Query: 178 RQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDW-----T 232 E +A I + + +L+ + + + + +Y DD Sbjct: 474 GDEFVILLAEIEQARDAAPIAEKLLAAFAEPCLIAGNELHVSLSIGISIYPDDGMDADTV 533 Query: 233 WNDVWYAFLLGGMSGTVVGLLCYYLMS----VRMRPGREIMTAIKREQFYVAYQPVVDTQ 288 + A +G M+ R+ + A+++ +F + YQP +D Sbjct: 534 MKNADTAMYHAKANGRNNYQFFTTEMNTRAVRRLFIEGNLRRALRQGEFMLYYQPKIDLA 593 Query: 289 ALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPV 348 + + G E L+RW+ P G + P F+ AE +IVP+ + R ++ V Sbjct: 594 SGMMIGSEALIRWQDPEHGLVYPKQFVPIAEESGLIVPIGSWVLREACRQVRAWQESGLV 653 Query: 349 GVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQL-FAWLH 407 V +NI+ + F + +L + LE+TE ++ + E++ L Sbjct: 654 AVPVSVNISAVEFRHKDFLEGVALILKETGMLPSYLELELTESILMHDAESSATVLEALK 713 Query: 408 SVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLN 467 ++G+++AIDDFGTG+S+L YL+RF ++ LKID+ F++ I + + ++ A++ + K L Sbjct: 714 TMGMQLAIDDFGTGYSSLSYLKRFPINTLKIDQSFVHDIAIDPDDASIVGAMIGMGKNLK 773 Query: 468 MLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 VAEGVET EQ +L + QG+ RPLP D+F R L Sbjct: 774 QRVVAEGVETEEQLAFLRTLHCDEGQGFLFGRPLPADEFARLL 816 >UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LA87_MAGSM Length = 1070 Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats. Identities = 99/333 (29%), Positives = 166/333 (49%), Gaps = 10/333 (3%) Query: 191 NTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFL---LGGMSG 247 ++ ++ L+ + + + + + LY D + + LG Sbjct: 721 EGEITGVANNLLKQFVMPFLVNGHELMLRTAMGIVLYPTDGQDAETLLRHVENALGQAKQ 780 Query: 248 TVVGLLCYY------LMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRW 301 V +Y + + R+ +E+ TA+++ F + YQP V+ Q V+G+E L+RW Sbjct: 781 QGVNNYRFYSEEMSNISNKRLALEQEMHTALEQRDFVLYYQPKVNLQRGVVSGVESLIRW 840 Query: 302 RHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHL 361 +H G I P FI AE +IVP+ + E +A + L +N++ Sbjct: 841 QHKQKGMISPVEFIPVAEETGLIVPMGLWILETACAEAKRITDYLGQPFTVAVNLSARQF 900 Query: 362 HSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGT 420 S + I + L + + EITE M+ E + + + ++GV +AIDDFGT Sbjct: 901 QSRNLLESISETLNNSAIDPSMLEFEITESMMMGNVEKSIETLVAIRNMGVTLAIDDFGT 960 Query: 421 GHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQ 480 G+S+L YL+RF ++ LKID+ FI +G ++ + ++ A++++A+ LN+ VAEG E EQ Sbjct: 961 GYSSLSYLKRFPINTLKIDQSFIRDLGVDSDDAAIVSAIISMAQDLNLHVVAEGAEKAEQ 1020 Query: 481 ARWLSERGVNFMQGYWISRPLPLDDFVRWLKKP 513 +L ERG +QGY+ SRPLP D R LK P Sbjct: 1021 VLFLKERGCETVQGYYFSRPLPQTDLERLLKDP 1053 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats. Identities = 94/346 (27%), Positives = 165/346 (47%), Gaps = 10/346 (2%) Query: 178 RQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDW-----T 232 E + LI + + + R+ V E + + + ++ DD Sbjct: 587 GDEFIVLLPLIADPGSAALAAERIREVLEPPVELFNHSISITPSIGISVFPDDGRDFETL 646 Query: 233 WNDVWYAFLLGGMSGTVVGLLCYYLMSVRMR----PGREIMTAIKREQFYVAYQPVVDTQ 288 + A +G ++ R R ++ A+ R++F + YQP VD + Sbjct: 647 VRNADAAMYHAKSAGRNSYKFYTADLNARAREILEIESQLRYALDRDEFVLHYQPQVDLK 706 Query: 289 ALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPV 348 + G E L+RW+HP G + P FI AE + IV + + + R A+ + Sbjct: 707 TGEIIGAEALIRWQHPELGLLGPVRFIEVAEERGFIVQIGNWVIQEACRQLAQWRRQGLP 766 Query: 349 GVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEAT-QLFAWLH 407 + +N++ + +Q+ L++ + +E+TE ++ + E T + Sbjct: 767 RISLAVNLSTLQFRQQDLAVHLQRALSAHGLVGSDLDVEVTESVIMDDVETTIHTIDRIK 826 Query: 408 SVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLN 467 S+G++++IDDFGTG+S+L YL+RF D LKIDR F+ I + S + A++ +AK LN Sbjct: 827 SMGLQLSIDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPMDADDSAIARAIINMAKNLN 886 Query: 468 MLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKP 513 M +AEGVET EQ ++L G + QGY +++P+P +F R L+K Sbjct: 887 MTVIAEGVETIEQWKFLDREGCHAAQGYLLAKPVPAKEFERLLEKG 932 >UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Marinomonas RepID=A6VW49_MARMS Length = 659 Score = 413 bits (1063), Expect = e-114, Method: Composition-based stats. Identities = 88/305 (28%), Positives = 141/305 (46%), Gaps = 10/305 (3%) Query: 221 PLTVRLYADDWTWNDVWYAFLLGGMS---GTVVGLLCYYL------MSVRMRPGREIMTA 271 + + Y D M T + C Y ++ + G + A Sbjct: 353 SIGIASYPQHADDVDNLLKNADAAMYRAKSTGHNMYCVYEDHMADNINAHLTLGGGLRKA 412 Query: 272 IKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHL 331 I+ EQF + YQP + V G E L+RW HP G I PD FI AE +I+PL + + Sbjct: 413 IEEEQFILHYQPKIRLPDEIVVGAEALIRWVHPELGMISPDQFIPLAEESGLILPLGEWV 472 Query: 332 FELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITER 391 R E + +K +N++ +Q+ L + LE+TE Sbjct: 473 IRRACRQLQEWREAGLDPIKLSVNLSSRQFMQADLVDMVQRALEETGVDPEYLELELTES 532 Query: 392 DMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTET 450 ++ + Q++ + +G+ ++IDDFGTG+S+L YL++F + LKIDR FI+ +G + Sbjct: 533 MLMADAQQSIEKLHSFRKLGLTLSIDDFGTGYSSLAYLKKFPIQTLKIDRSFIHDLGLDC 592 Query: 451 ITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 ++ A + +A LN+ +AEGVE Q L+ +QGY S+PL DDF+ +L Sbjct: 593 DNDAIVKATIAMANSLNLKVIAEGVENRSQVDVLNGYDCQEVQGYLFSKPLSSDDFLMYL 652 Query: 511 KKPYT 515 K Sbjct: 653 KAHSV 657 >UniRef50_Q47EK9 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47EK9_DECAR Length = 963 Score = 413 bits (1063), Expect = e-114, Method: Composition-based stats. Identities = 95/307 (30%), Positives = 148/307 (48%), Gaps = 10/307 (3%) Query: 214 ETKIAGIPLTVRLYADDWT-WNDVWYAFLLGGMSGTVVGLLCYYLM--------SVRMRP 264 + A + + Y D +++ + G +G Y RM Sbjct: 382 QDVFATAGVGIVFYPQDGNDVHELVTNAGIAGRHAKNLGRNSYQYYFPGMHEGARDRMFL 441 Query: 265 GREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMI 324 ++ A R +F + YQP R+TG+E LLRW+HP G + PD FI E +I Sbjct: 442 EIDLRHATLRNEFVLYYQPKASCADGRITGVEALLRWQHPERGIVSPDQFIPLLEETGLI 501 Query: 325 VPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQI 384 V + + + E R A E + +N++ L +E+ D+ L + + Sbjct: 502 VQVGRWVLEEACRQAVEWQAAGLNIPSVSVNLSARQLQAETLLTDVAATLEKTGLNAACL 561 Query: 385 VLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFI 443 LEITE ++ + A Q + L +GV I++DDFGTG+S+L YL+RF LD +K+DR F+ Sbjct: 562 DLEITESMLMDNADMAIQTLSALKKMGVTISLDDFGTGYSSLAYLKRFPLDAIKVDRSFV 621 Query: 444 NAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPL 503 I ++ + + AV+T+A L + VAEGVETPEQ L + +QGY+ SRP+P Sbjct: 622 QDIAADSDDASITRAVITMAHHLKLKVVAEGVETPEQLALLISHQCDVIQGYFFSRPMPA 681 Query: 504 DDFVRWL 510 L Sbjct: 682 SGMTELL 688 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 413 bits (1063), Expect = e-114, Method: Composition-based stats. Identities = 89/317 (28%), Positives = 145/317 (45%), Gaps = 10/317 (3%) Query: 204 VNELTDMPVRETKIAGIPLTVRLYADDW-----TWNDVWYAFLLGGMSGT----VVGLLC 254 + E + + LY D A +G L Sbjct: 735 LTERPFATSECDINTTASIGIALYPQDGQDPETLLKRADTAMYEAKKNGRNGYHFFSLQL 794 Query: 255 YYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAF 314 R R + +A+K + + YQP +D +R+TG+E LLRW+ P G I P F Sbjct: 795 AEQAERRHRMEINLRSALKEGEMQLVYQPQIDLGKVRITGMEALLRWQSPEEGTISPARF 854 Query: 315 INFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLL 374 I AE +I PL + + + R A +K + +N++ H +I+K+L Sbjct: 855 IPLAEETGLIYPLGEWVLQQACRQGAIWQKTEASPLCVAVNLSAKQFHQPDLAKNIKKIL 914 Query: 375 TSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTL 433 + LEITE L+ E A + L +GV+ +IDDFGTG+S+L YL++ + Sbjct: 915 RETGLSPHLLELEITESVFLENMEAAIEALTELKKLGVQFSIDDFGTGYSSLSYLKKLPI 974 Query: 434 DYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQ 493 D +KI + F+ I T+ ++ A + +AK L M +AEGVE +Q +L G + MQ Sbjct: 975 DRIKIAQEFVRDIDTDDGDKAIIKATIAMAKSLGMKLIAEGVENHQQLAFLLLHGCHAMQ 1034 Query: 494 GYWISRPLPLDDFVRWL 510 GY+ ++P+P + ++ Sbjct: 1035 GYYFAKPMPAQEVPSFI 1051 >UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HTT7_9BACT Length = 860 Score = 413 bits (1062), Expect = e-114, Method: Composition-based stats. Identities = 85/304 (27%), Positives = 145/304 (47%), Gaps = 8/304 (2%) Query: 221 PLTVRLYADDWTWNDVWYAFLLGGM--SGTVVGLLCYY------LMSVRMRPGREIMTAI 272 + + + D +D+ M + + +Y L R RE+ A+ Sbjct: 554 SIGISTWPHDGESSDLLLRRADAAMYRAKELGNSYAFYNPEIGALPERRFSMERELRRAL 613 Query: 273 KREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLF 332 +R +F + +QP +D G E L+RWRHP G I PD FI AES +IVP+ + Sbjct: 614 ERNEFELFFQPQIDLATGNCVGAEALIRWRHPEKGLILPDQFIPVAESTGLIVPMGAWVI 673 Query: 333 ELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERD 392 + ++ +N++ ++ + + +E+TE Sbjct: 674 RSACPHLKSWREAGMAPLRLTVNVSVKQFERGGLIQTLESSMRESGVDSRLLEIEVTESV 733 Query: 393 MLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETIT 452 +++ A+ L +G+ I+IDDFGTG+S+L YL++ + LKIDR F+ + + Sbjct: 734 LMQHPMASDTLRELSRMGILISIDDFGTGYSSLSYLKKLPVYKLKIDRSFVTTLPVDPDM 793 Query: 453 SPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 + A++T+ L + T+AEGVE+ EQ L G + +QGY+ SRPLP D F+ W+++ Sbjct: 794 LAITTAIVTMGSALRLKTIAEGVESREQLDILRRLGCDEIQGYYYSRPLPNDTFMTWVRE 853 Query: 513 PYTP 516 TP Sbjct: 854 KSTP 857 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 413 bits (1062), Expect = e-114, Method: Composition-based stats. Identities = 84/256 (32%), Positives = 138/256 (53%), Gaps = 2/256 (0%) Query: 262 MRPGREIMTAIKREQFYVAYQPVVDTQA-LRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 +R + A++R + + YQP +D RV G+E L+RW+HP G + P FI AES Sbjct: 783 LRLETALRRALERNELVLHYQPQIDLVDFGRVAGVEALIRWQHPEFGLVSPAEFIPIAES 842 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +I+P+ + + + + + G+N++ ++ A + ++L Sbjct: 843 TGLILPIGEWVMQTALLQLKAWQLAGLQLGQVGVNLSAHQFRQQNLPATVARILAEAGLP 902 Query: 381 HFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 + LE+TE M+ + A + LH GV ++IDDFGTG+S+L YL+RF +D LKID Sbjct: 903 ASCLELELTESAMMDDPVAAVAMMDALHRDGVRMSIDDFGTGYSSLNYLKRFRIDKLKID 962 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 + F+ + + +++A+++LA+ L T+AEGVE PEQ +L G +QGY SR Sbjct: 963 QSFVRDLTQDPEGEAIVEAIVSLARTLRFRTIAEGVEKPEQLAFLRASGCQEVQGYLFSR 1022 Query: 500 PLPLDDFVRWLKKPYT 515 PLP D+ WL+ Sbjct: 1023 PLPPDELAVWLRAWRP 1038 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 94/305 (30%), Positives = 149/305 (48%), Gaps = 7/305 (2%) Query: 212 VRETKIAGIPLTVRLYAD-DWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVR----MRPGR 266 +R T G+ + R D D A G + R + Sbjct: 777 LRVTPSLGVAVFPRDGNDCDALLRHADAALYHAKSRGRNTYRFFTREIDDRVSEYLHIEH 836 Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 + +A++R +F + YQP VD RV G+E LLRW+HP G I P F+ AE +IVP Sbjct: 837 GLRSALERGEFELHYQPQVDMAFGRVVGVEALLRWKHPEQGMISPVRFVPIAEETGLIVP 896 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 + + R A + + +N++ S S I + L + + Sbjct: 897 IGMWVIREACRQAMLWRRAGLRPMTMAVNLSGRQF-SRSVIEAIDEALADSGLDPRWLQV 955 Query: 387 EITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 E+TE ++++ QEA + L + G+ +A+DDFGTG+S+L YL+RF +D LKIDR FI Sbjct: 956 EVTESVIMEDTQEAYTVLEALRARGLTVAVDDFGTGYSSLAYLKRFPIDKLKIDRSFIRD 1015 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 I + ++DA++ +A L + +AEGVET Q +L ++G + +QGY +SRP P Sbjct: 1016 IDLDEDNPVIVDAIIGMAHNLRIKVLAEGVETRAQWDYLRQQGCDEVQGYLVSRPQPAAA 1075 Query: 506 FVRWL 510 +W+ Sbjct: 1076 LGQWM 1080 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 102/360 (28%), Positives = 165/360 (45%), Gaps = 15/360 (4%) Query: 167 LNLTPSLFYSSRQEDYDGVALIIGN-TALSTFSSRLMNVNELTDMPVRETKIAGI---PL 222 L SL + + D L++G T + T NV EL P + + Sbjct: 689 LRQQLSLADTICRPGGDEFYLLLGRLTDIDTAVQAAQNVLELFSKPFQAADHQLYLTPSI 748 Query: 223 TVRLYADD---------WTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIK 273 + L+ DD +++A GG S + RM + A++ Sbjct: 749 GITLFPDDGEEVESLIQSVETAMYHAKKDGGNSFQFFQETMFTAALGRMTMKNRLRRAVE 808 Query: 274 REQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAG-EIPPDAFINFAESQKMIVPLTQHLF 332 E+F + YQP + V G E L+RW P G + P FI AE +I+P+ + + Sbjct: 809 LEEFELYYQPKIAADGRTVVGAEALIRWVQPERGGPVSPAEFIPLAEETGLIIPIGEWVL 868 Query: 333 ELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERD 392 R + ++ ++ +N++ +I +L + + LEITE Sbjct: 869 RQACRQSLLWQQAGLPPLRIAVNLSAVQFKQPGLDDEINWILQEIGLPAELLELEITESL 928 Query: 393 MLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETI 451 ++++ A L +G+ +A+DDFGTG+S+L YL+ F LD LKIDR F+ + T+ Sbjct: 929 LMEDVTTANATLWKLKDMGIHLALDDFGTGYSSLSYLKNFPLDTLKIDREFVRDLSTDDE 988 Query: 452 TSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 V+ ++TLA L M VAEGVE +Q +L +RG + QGY SRPLP +F ++L+ Sbjct: 989 DRAVIITIITLAHSLKMEVVAEGVEDADQVAFLRQRGCDVFQGYHFSRPLPAKEFEQFLR 1048 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 94/318 (29%), Positives = 150/318 (47%), Gaps = 11/318 (3%) Query: 204 VNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGM-SGTVVGLLCYYLM---- 258 V++ G + + LY D M G Y Sbjct: 561 VDQPFGFSGGGEAYVGASIGISLYPGDGRSASELIRNADAAMYLAKAQGSNAYRFYTESL 620 Query: 259 ----SVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAF 314 + R+ + A++ E+F + YQP+V+ + RV G EVL+RW+ P +PP F Sbjct: 621 TRAANERLSMETSLRRALRCEEFVLHYQPLVELASGRVLGAEVLVRWQPPGEALVPPSRF 680 Query: 315 INFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLL 374 I AE +IVPL + R + +N++P ++K L Sbjct: 681 IPLAEETGLIVPLGDWVLHEACRQGKAWLDAGL-PLLLAVNLSPRQFLRHDLVGQVRKAL 739 Query: 375 TSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTL 433 Q+ LE+TE ++++ E A + L +GV +AIDDFGTG+S+L YL+RF L Sbjct: 740 QGSGLPPAQLELELTEGALMEQAEQAVKTLHALKRLGVSLAIDDFGTGYSSLAYLKRFPL 799 Query: 434 DYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQ 493 D LKIDR F+ + ++ + ++ ++ + + L + +AEGVETP+Q +L + G + Q Sbjct: 800 DKLKIDRSFVRDLPRDSSDAEIVTTIIAMVRNLKLEALAEGVETPQQLAFLRQLGCDSGQ 859 Query: 494 GYWISRPLPLDDFVRWLK 511 GY S PLP + F RWL+ Sbjct: 860 GYLFSPPLPAEAFERWLR 877 >UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium RepID=B0UQT2_METS4 Length = 797 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 83/309 (26%), Positives = 144/309 (46%), Gaps = 14/309 (4%) Query: 219 GIPLTVRLYADDWTWNDVWYAFLLGGMSG---------TVVGLLCYYLMSVRMRPGREIM 269 G + + L D + + G + M R ++ Sbjct: 492 GASIGIALAPQDGDTPEQLLRSADLALYGAKEEGRGRFRMFEGTMNARMQARRSLELDLR 551 Query: 270 TAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQ 329 A+ R++F + +QP VD + R G E L+RW HP G + P FI AE +I PL + Sbjct: 552 RALARQEFELYFQPQVDARTGRFDGAEALIRWHHPERGLVSPGEFIPLAEETGLIGPLGE 611 Query: 330 HLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEIT 389 + +A LP +N++P A ++ +L ++ +EIT Sbjct: 612 WVLRTACAEARRWATPLP----VAVNLSPVQFRDPRLAATVRGILAETGLPGSRLEIEIT 667 Query: 390 ERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGT 448 E +++++ T + L +G+ I++DDFGTG+S+L YL RF D +KID+ F+ Sbjct: 668 EGTLMQDEHRTLAVLTELRGLGIRISMDDFGTGYSSLSYLRRFPFDKIKIDQSFVRQTPQ 727 Query: 449 ETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVR 508 + + ++ A+ L + L + T AEGVET +Q+ +++ G + +QGY SRP+P + Sbjct: 728 DRDSVAIVRAIAMLGRSLGIKTTAEGVETDQQSVFIAGEGCDQLQGYLYSRPVPAESIAE 787 Query: 509 WLKKPYTPQ 517 + P P+ Sbjct: 788 LFRAPRAPR 796 >UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACK6_ALHEH Length = 857 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 91/310 (29%), Positives = 149/310 (48%), Gaps = 13/310 (4%) Query: 221 PLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSV---------RMRPGREIMTA 271 + V ++ D T + + + +Y R+ ++ A Sbjct: 547 SVGVAVHPRDGTRREALISAADTALHYVKAHGSNHYQFHEPGMTAAAAERLHLENDLREA 606 Query: 272 IKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHL 331 + R +F + YQPV+DT+ L V G E LLRW HP AG IPPD FI AE +I P+ + Sbjct: 607 LLRGEFELYYQPVLDTERLTVCGAEALLRWHHPEAGLIPPDRFIPLAEETGLIRPIGTWV 666 Query: 332 FELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITER 391 AA ++ G+ +N++ + + +++ L + +VLEITE Sbjct: 667 LREACAQAARWRRLGLTGMTVSVNVSGEQFWRDELPQAVRQALEAQALAPDALVLEITES 726 Query: 392 DMLKEQEATQL-FAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTET 450 ++ T+ L ++GV +++DDFGTG+S+L YL+RF +D LKID+ F+ + + Sbjct: 727 VLMHGSANTETRLRELKAMGVGLSLDDFGTGYSSLSYLKRFPIDTLKIDKSFVRDMVRDE 786 Query: 451 ITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 + V+ + L + VAEGVE+ E L + +QGY SRPLP RW+ Sbjct: 787 HDRTLAQTVIAMGHGLGLQVVAEGVESAEHLPLLRRARCDRVQGYHFSRPLPARALSRWI 846 Query: 511 KKPY---TPQ 517 ++ +PQ Sbjct: 847 QQHQCSRSPQ 856 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 96/347 (27%), Positives = 165/347 (47%), Gaps = 23/347 (6%) Query: 188 IIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPL-------------TVRLYADDWTWN 234 +G + ++L++ NE T++ + P + LY D Sbjct: 360 RLGGDEFTIMQNQLLDRNEATELAEQIMYQLQRPFELDGHVFNVSCSIGIALYPQDGDNP 419 Query: 235 DVWYAFLLGGMS---GTVVGLLCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVV 285 + + ++ S+ R+ E+ AI++EQF + YQP + Sbjct: 420 EDLLKRADTALYTVKSRGKNGYDFFDPSMEAKSLERILMENEMRKAIEQEQFQIYYQPKI 479 Query: 286 DTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKV 345 D +TG+E L+RW HP G IPP+ FI AE MI+ L + + + + Sbjct: 480 DIATSAMTGMEALVRWVHPELGIIPPNRFIPIAEETGMILALGEWILKQACKQNKNWHDQ 539 Query: 346 LPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAW 405 +K +N++ ++ + I+ +L + LEITE +K +EAT + Sbjct: 540 GYT-LKVSVNLSARQIYQKDLVEMIKDILQETKLSPHWLELEITESIFVKMEEATAVLQQ 598 Query: 406 LHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKR 465 + +G++I+IDDFGTG+S+ Y++ +D +KID FI I + ++ A++T+A+ Sbjct: 599 IRDIGIQISIDDFGTGYSSFSYIKSLPVDTIKIDASFIRDIHHNQESQAIVKAIVTIAQS 658 Query: 466 LNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 LNM +AEG+E +Q L E G + QGY S+PLP DDF + L++ Sbjct: 659 LNMNVIAEGIELHDQVAALKENGCDHGQGYLFSKPLPTDDFDQLLRQ 705 >UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase sensor n=1 Tax=Thauera sp. MZ1T RepID=C4KA21_THASP Length = 1093 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 101/350 (28%), Positives = 159/350 (45%), Gaps = 10/350 (2%) Query: 176 SSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWND 235 E ++ + + + R+++ + G + + LY D D Sbjct: 741 IGGDEFVILLSRLAHAEEPARVAERVLDALARPLQIDSQPLRVGASIGIALYPADGGEID 800 Query: 236 VWYAFLLGGMS-GTVVGLLCYYLM--------SVRMRPGREIMTAIKREQFYVAYQPVVD 286 M G Y + R++ E+ AI+ + YQP +D Sbjct: 801 TLLKHADTAMYEAKESGRNAYRFFLPEMTQRVTRRLQTEAELRKAIESGDLRLHYQPQID 860 Query: 287 TQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVL 346 + RV G E L+RW+HP G +PPD F+ FAE +IVPL + + Sbjct: 861 AASGRVYGCEALVRWQHPERGLLPPDRFVPFAEQSGLIVPLGEWVLREACLQQVRWRDAG 920 Query: 347 PVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLK-EQEATQLFAW 405 + +NI+ F A + ++L A +I LEITE ++ E F Sbjct: 921 LPPLDVAVNISALQFRRRDFVATVARVLGETGADPARIELEITESALMDATPELVASFDQ 980 Query: 406 LHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKR 465 L ++G+ +A+DDFGTG+S+L YL+R L LKIDR F++ + + + A L+LA+ Sbjct: 981 LVALGLTLALDDFGTGYSSLSYLKRLPLRRLKIDRSFVDGLPDNPEDAAITSATLSLARD 1040 Query: 466 LNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYT 515 L M VAEGVET +Q +L +RG MQGY SRPL +++F W ++ Sbjct: 1041 LGMEVVAEGVETEDQRGYLCKRGCRAMQGYLFSRPLGVEEFGTWFEEQAA 1090 >UniRef50_Q3A1F4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1F4_PELCD Length = 703 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 75/256 (29%), Positives = 129/256 (50%), Gaps = 1/256 (0%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+ + A+ +Q + YQP VD + + G+E LLRW P G + P FI AE Sbjct: 440 RIEIETGLRRALDLQQLALHYQPQVDLKTGHIIGMEALLRWESPELGRVSPMRFIPLAEE 499 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +I+P+ + E R A + ++ +NI+ F + ++ + Sbjct: 500 TGLILPIGNWVLESACRQAKAWHRAGFPSLRMAVNISARQFKQAGFIDRLDAIIQRSGIN 559 Query: 381 HFQIVLEITERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 + +E+TE +++ E + S G+++AIDDFGTG+S L YL+ F +D +K+D Sbjct: 560 PELLEMELTESLIMEKSDETLMTLVDIKSRGIKLAIDDFGTGYSMLSYLKHFPIDRIKVD 619 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 R F+ I T + + +A++ +A L + +AEG+ET EQ +L +R QGY+ R Sbjct: 620 RSFVRDIPENTDDAAITEAIIAMAHSLKIEVIAEGIETREQLAFLKDRACEEGQGYYFGR 679 Query: 500 PLPLDDFVRWLKKPYT 515 P+P++ L + Y Sbjct: 680 PVPVETAAEILAQQYP 695 >UniRef50_B7GID3 Multidomain signal transduction protein (Contains GGDEF and EAL domains) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GID3_ANOFW Length = 552 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 87/355 (24%), Positives = 156/355 (43%), Gaps = 10/355 (2%) Query: 168 NLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLY 227 + ++ + I + ++ + + + V ++ Sbjct: 192 RYENGIVARQARDQFFLAFYTIDRNEIRDMIRDVIQIFSTPFQLTDQELTITPSIGVSVF 251 Query: 228 ADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSVR------MRPGREIMTAIKREQFY 278 DD T +F + C+Y ++ + I A+K+ +F Sbjct: 252 PDDATDWTTLLSFADLALEIAKENGGNTYCFYTNELKKTNEEKLYIQHSIRKALKQNEFT 311 Query: 279 VAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARD 338 + YQP+VD Q + +E LLRW HP G I P FI AE +I P+ + + Sbjct: 312 LHYQPIVDIQTGDIVAVEALLRWFHPKRGWISPATFIPIAEETNLIQPIGDWVLRNVCEQ 371 Query: 339 AAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE 398 + + ++ V+ G+N++ I+ +L + F + LEITE + + Sbjct: 372 SKKWKEKGLPHVQIGVNVSIKQFLQADLVKHIEHVLRTYDLDPFCLKLEITESMAMHHID 431 Query: 399 -ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLD 457 L +G+++A+DDFGTG+S+L YL++ +D +KIDR F+ + + ++ Sbjct: 432 YVLAQLQSLKHLGLQLAVDDFGTGYSSLNYLKKLPVDIIKIDRSFVQDMVKHSYDLSIVR 491 Query: 458 AVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 AV+ +A L M VAEGVET EQ L G + QGY+ S+PL + F + +++ Sbjct: 492 AVIQVAHSLQMKVVAEGVETEEQLAILKREGCDRAQGYYFSKPLAAEQFEQLVQQ 546 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 113/483 (23%), Positives = 205/483 (42%), Gaps = 51/483 (10%) Query: 47 ITDVQKYLDTY-----FADLKSTTDRLQPLTLDTCQQANPELTARAAFSM----NVRTFV 97 +T +++Y + + L +R L + QQA + F ++ F Sbjct: 375 VTQIKRYQEDLEHQANYDTLTGLANR--NLLNERTQQALLQARRHDHFLSLVFIDLDNFK 432 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDI--NKNVDMAILPGTPMVPNKPAIVIWYRNPL 155 LV D S G D + + L +A + G V +++ ++ Sbjct: 433 LVND-----SMGHGAGDELIANVGSRLQTCVRDGDTVARIGGDEFV-----LLLTNQSVS 482 Query: 156 LKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRET 215 N+GV + L ++ ++ V +G ++ D + Sbjct: 483 DSNAGVMQRIQAELIKPMWIRGQE---IVVTCSMGVARFPEDGEDSESLLANADTAMYRA 539 Query: 216 KIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKRE 275 K +G + F M+ T R+ ++ A+K + Sbjct: 540 KSSGRNN---------------FQFYTKEMNAT---------SGERLSLESDLWHALKND 575 Query: 276 QFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELI 335 + ++ YQP +D + V G+E L+RW+HP G I P FI AE +I+P+ + E Sbjct: 576 ELFLVYQPQIDLRDGTVIGMEALIRWQHPKRGLIAPMDFIPMAECNGLIIPIGIWVLETA 635 Query: 336 ARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLK 395 R +L+K ++ IN++ L +F +Q ++ ++ + LE+TE ++ Sbjct: 636 CRHNLQLQKEGLPPIRVAINLSARQLSDRNFVESVQSVIEAIGLDPHYLELEVTESMVMH 695 Query: 396 E-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSP 454 ++ L+ +G+++++DDFGTG S+L YL+RF +D LKID+ FI ++ + Sbjct: 696 NVEDVVVTLNDLNKMGIQLSLDDFGTGFSSLAYLKRFPIDRLKIDQSFIFNCDSDPGDAI 755 Query: 455 VLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPY 514 + ++ LA L + +AEGVE E +L + G + QGY+ISRPL DD +L Sbjct: 756 IAQTIIALAHGLKIKVIAEGVEKSEHLSFLKKNGCDEGQGYFISRPLTFDDLRMFLLTGK 815 Query: 515 TPQ 517 P Sbjct: 816 NPH 818 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 86/346 (24%), Positives = 161/346 (46%), Gaps = 10/346 (2%) Query: 178 RQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDW-----T 232 E +A + + +SR+++ + + L + LY D Sbjct: 354 GDEFVLLLAEVTEPDDVGLLASRILHELAVPHRIEGREIVMSASLGISLYPKDSGDGSTL 413 Query: 233 WNDVWYAFLLGGMSGTVVGLLCYYLMSVR----MRPGREIMTAIKREQFYVAYQPVVDTQ 288 + A G V M+ R M + A++R +F + YQP VD Sbjct: 414 IRNADIAMYRAKQEGGGVFSFYAPEMNQRAMETMEIESALRLALERGEFTLYYQPKVDLA 473 Query: 289 ALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPV 348 + R++G E L+RW HP G + P FI AE +IVP+ + + R + Sbjct: 474 SGRISGCEALIRWLHPRRGVVAPADFIPLAEETGLIVPIGTWVLKEACRQVRAWQAEGVP 533 Query: 349 GVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKE-QEATQLFAWLH 407 +N++ + ++++L + LE+TE ++ + + + L Sbjct: 534 IANVAVNLSARQFRTGDLPGLVREVLGETGLDPHLLELEMTESMVMADHAQVVAVMEELT 593 Query: 408 SVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLN 467 ++GV +++DDFGTG+S+ +L F +++LKIDR FI I T+ ++ + +++ +A R+ Sbjct: 594 AIGVRLSLDDFGTGYSSFAHLSHFPINHLKIDRSFIKQIVTDPNSATIATSIIAMAHRMR 653 Query: 468 MLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKP 513 + +AEGVET Q +L ++G + +QGY +SRPLP ++ +++ Sbjct: 654 LKAIAEGVETEAQLAYLRKQGCDEIQGYLLSRPLPASEYAALVRRD 699 >UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ20_DESAC Length = 814 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 95/344 (27%), Positives = 163/344 (47%), Gaps = 13/344 (3%) Query: 181 DYDGVALIIGN----TALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDV 236 D AL++G+ +L L+ + + + L+ +D + Sbjct: 455 GGDEFALVLGDLNNEESLIPLMQDLLKEISSPCHIDNHHIVVTASIGISLFPNDGNDSIT 514 Query: 237 WYAFLLGGM--SGTVVGLLCYYLMSVR------MRPGREIMTAIKREQFYVAYQPVVDTQ 288 M S G +Y + + +++ A++R + + YQP V Q Sbjct: 515 LLRNADLAMYQSKRHKGDFTFYSSDMNQHAVKILELEKDLRQALERGELLLHYQPKVSLQ 574 Query: 289 ALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPV 348 + ++ G E L+RW+HP+ G + P FI AE +IVP+ + E + A ++ Sbjct: 575 SGKIVGCEALIRWQHPLRGLVSPADFIPLAEETGLIVPIGTWVLEQACQQAISWQQQQLP 634 Query: 349 GVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLH 407 + +N++ + + +L + H + LEITE ++ + E A Q L Sbjct: 635 TITMAVNLSSRQFRHGNLCDVVDTILETTTLHPDLLDLEITESMIMDDPEGAVQTMIALK 694 Query: 408 SVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLN 467 GV +++DDFGTG+S+L YL RF +D LKID FI + ++ ++ V +++ +A L Sbjct: 695 ERGVLLSLDDFGTGYSSLNYLRRFPVDCLKIDASFIRDVAQDSSSAAVAVSIVDIAHHLG 754 Query: 468 MLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 + TVAEGVET EQ +L + + +QGY SRPLP +DF L+ Sbjct: 755 LTTVAEGVETVEQLDFLEKCHCDILQGYLYSRPLPAEDFTSLLR 798 >UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Variovorax paradoxus S110 RepID=C5CTK8_VARPS Length = 1107 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 107/344 (31%), Positives = 163/344 (47%), Gaps = 15/344 (4%) Query: 187 LIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADD-----WTWNDVWYAFL 241 L N A L E + RE ++ + V +Y D+ + A Sbjct: 761 LSSANDAAGLAEKVLACCAEPFFLAGRELHVSA-SVGVSIYPDNGADAEALLKNADTAMY 819 Query: 242 LGGMSGTVVGLLCYYLMSVR----MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEV 297 G M+ + + + A++R + + YQP +D Q R+ G+E Sbjct: 820 RAKERGRNTFRFYAAKMNAQNTEQLMLESALRHALERGELEMHYQPKMDLQTQRIVGVEA 879 Query: 298 LLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIA 357 L+RW HP+ G IPP FI AE +IV L + E D+ +K V +N++ Sbjct: 880 LMRWHHPILGMIPPVQFIPIAEELGLIVSLGKWALERACADSRSWQKYGLPKVLMSVNLS 939 Query: 358 PDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAID 416 P S + ADIQ +L + + LEITE ++ E A +L + +GV +AID Sbjct: 940 PRQFESRTLIADIQAVLEASGLEPSLLELEITEGAVMANPEHAAKLLRAIRDMGVGLAID 999 Query: 417 DFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVE 476 DFGTG+S+L YL+ F L +KIDR FIN + + ++D ++TLA L M VAEG+E Sbjct: 1000 DFGTGYSSLSYLKHFPLSTVKIDRSFINDLSQDADARALIDGIITLAHGLRMKVVAEGIE 1059 Query: 477 TPEQARWLSERGVNFMQGYWISRPLPLDD----FVRWLKKPYTP 516 T Q +L G + QGYW+ +P+P D+ R L+ + P Sbjct: 1060 TTAQLDYLRSHGCDEAQGYWLCKPVPADEVRNFMARHLRNQFAP 1103 >UniRef50_Q2W3S8 Predicted signal transduction protein containing a membrane domain n=4 Tax=Bacteria RepID=Q2W3S8_MAGSA Length = 548 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 86/309 (27%), Positives = 142/309 (45%), Gaps = 10/309 (3%) Query: 214 ETKIAGIPLTVRLYADDW---------TWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRP 264 + + + + +Y D N + YA + G R+ Sbjct: 234 QEVVVTFSIGISVYPLDADSSAQLVKHAENALHYAKVSGRNQYQFFSKDMNRKAKSRLEL 293 Query: 265 GREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMI 324 + A+ ++F V YQP V + G E L+RW P G +PP FI AE I Sbjct: 294 EGRMRRALANQEFVVFYQPKVSADRDAIVGAEALIRWMDPERGMVPPGEFIPVAEESGQI 353 Query: 325 VPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQI 384 P+ + ++ +K +N++ S S + ++L S + Sbjct: 354 EPIGTWVLRQSCIQNRLWQEAGFNPIKVSVNVSARQFRSPSLLQTVTEVLDSTGLDPKWL 413 Query: 385 VLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFI 443 LEITE ++ + + A + L +G+ ++IDDFGTG+S+L YL RF + LKIDR FI Sbjct: 414 ELEITESMLMNDVDTAVRKMKALRDLGIGLSIDDFGTGYSSLSYLGRFPITTLKIDRAFI 473 Query: 444 NAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPL 503 + T T+ + A++ L++ LN+ VAEG E E +L G + +QG++ SRP+P Sbjct: 474 ADVDTNPKTAEIARAIIGLSRGLNLEVVAEGAEIAEHIMFLRNNGCDTVQGFYYSRPVPA 533 Query: 504 DDFVRWLKK 512 D+F R + + Sbjct: 534 DEFERMMGQ 542 >UniRef50_C1HI32 Rtn protein n=6 Tax=Escherichia RepID=C1HI32_9ESCH Length = 511 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 149/507 (29%), Positives = 233/507 (45%), Gaps = 35/507 (6%) Query: 16 CIVAGVMIAILVSCLQFLVAWHKHEVKYDTLIT--DVQKYLDTYFADLKSTTDRLQPLTL 73 +VAG +I + + L F W K E+ D+ I Y++ S + + L L Sbjct: 13 AMVAGSLIFLFIILLTFF--WKKAELVNDSQIRVNFALGYIENILNQNNSISQEAEHLLL 70 Query: 74 DTCQ-QANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDM 132 + C EL+ +R L + + FCS+ G P+ E DM Sbjct: 71 NNCNADTQHELSNLLLKRPQLRALSLARQEAVFCSTHPGLPVGPVAE-----KEQWRHDM 125 Query: 133 AILPGTPMVPNKPAIVIW-YRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGN 191 I P + W KN V A + + S + +GN Sbjct: 126 LI-----RFPEDTGTLPWILLRTPYKNGTVITATDYYFIQDII--SVVHAVPAIRFRLGN 178 Query: 192 TALSTFSSRLMNVNELTDMP--VRETKIAGIPLTVRL-----YADDWTWNDVWYAFLLGG 244 T LS NV L D +E+ P ++ + W WY + Sbjct: 179 TVLSASGK---NVTLLPDDSGIQKESHSKKYPFSLIYIIPVKMQLTYAWKQAWYMIPVAI 235 Query: 245 MSGTVVGLLCYYLMSVRM--RPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWR 302 G+L +L+S R P + A+ +F +QP++ + ++TG EVL+RW Sbjct: 236 FG----GILTAFLLSRRRPSSPLDMLKNALAHGEFRPYFQPIISAKNHQLTGCEVLIRWH 291 Query: 303 HPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLH 362 HPV+G IPPD FI AES +I P+TQ L + + LP GINI+P H Sbjct: 292 HPVSGIIPPDQFIPLAESTGLIAPITQQLMSQVEHSLNSVAHFLPNQFHIGINISPAHFL 351 Query: 363 SESFKADIQKLLTSLPAHHFQIVLEITERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTG 421 S + K L++ P ++VLE+TER+ L E+ LFA LH GV A+DDFGTG Sbjct: 352 SPGLEDSCMKFLSTFPKGKVKLVLELTERNQLSVTAESKALFAKLHQQGVLFALDDFGTG 411 Query: 422 HSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQA 481 ++ YL+ F +DY+K+D+GF+ +G + I+ +++ V+ LA+RL + +AE +ET Q Sbjct: 412 YATHSYLQSFPVDYIKLDKGFVQMVGVDEISGHIVENVIELARRLGIDIIAEVIETESQE 471 Query: 482 RWLSERGVNFMQGYWISRPLPLDDFVR 508 +++E+G ++QGY + PLP + F+ Sbjct: 472 LFMTEKGSCYLQGYRYAPPLPAEQFIA 498 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 95/355 (26%), Positives = 163/355 (45%), Gaps = 10/355 (2%) Query: 167 LNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRL 226 L T ++ E V I L + ++M+ + +++ + + + Sbjct: 689 LRQTDTIARQGGDEFVVLVEDFIEQQYLVNVARKIMHALAQPFILMQQELYISASIGISV 748 Query: 227 YADDWT-WNDVWYAFLLGGMSGTVVGLLCYYLMSV--------RMRPGREIMTAIKREQF 277 Y DD + + + G ++ S R+ + A++R +F Sbjct: 749 YPDDGVDISSLLKNADMAMYRAKDDGKNTFHFYSADGNANSVSRLTLENSLRRALERNEF 808 Query: 278 YVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIAR 337 + YQ +D + G E L+RW G + P FI AE MI+ + + + + R Sbjct: 809 SLLYQAKLDLAEQNIIGAEALIRWHSAELGMVSPQDFIPVAEETGMIIEIGEWVLQQACR 868 Query: 338 DAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQ 397 DA ++V ++ G+NI+ +S I L + LEITE +++ Sbjct: 869 DACHWQEVAGRPIRVGVNISARQFREDSLYQAISNALEESGLTPNCLELEITESMIMQNA 928 Query: 398 E-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVL 456 E A+Q+ ++G + IDDFGTG+S+L YL+ F +D LKIDR F+ I ++ + Sbjct: 929 ERASQMLQHFRNLGSYVLIDDFGTGYSSLGYLKHFPIDSLKIDRSFVRDIPQDSDDMAIT 988 Query: 457 DAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 A++ +A L + VAEGVET Q +L +G + +QGY SRPL ++DFV L+ Sbjct: 989 QAIIAMAHSLKINVVAEGVETQAQLEFLRGQGCDQLQGYIFSRPLVVEDFVGLLR 1043 >UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWZ7_9PROT Length = 1217 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 86/350 (24%), Positives = 159/350 (45%), Gaps = 15/350 (4%) Query: 178 RQEDYDGVALIIGN----TALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTW 233 +E D +++G+ A+ ++++ + + ++ +D Sbjct: 858 SREGGDEFIILLGDVGDLAAIEIIVQKILDAFSEPFTVDDHIVSVTSSIGISIFPNDGRD 917 Query: 234 NDVWYAFLLGGMS-GTVVGLLCYYLMSVRM--------RPGREIMTAIKREQFYVAYQPV 284 + + + G Y + +M + ++ AI ++F + YQP Sbjct: 918 FNRLISQSEAALQKAKAAGKDTYNFFTEQMNINALEHMQLQGQLRHAIINQEFRIYYQPQ 977 Query: 285 VDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEK 344 +DT R+ G E L+RW+HP G +PP FI AE +I+PL + + R A K Sbjct: 978 IDTLNERMIGAEALVRWQHPQHGLVPPLKFIPLAERSGLIIPLGEWVLNEACRQAQVWRK 1037 Query: 345 VL-PVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEAT-QL 402 + +N++ + + + L + LE+TE +L + E + Sbjct: 1038 RNRMPSMVMAVNLSAVQFKRGNIVETVIQALERSGLPAENLELELTESILLDDVEVVMET 1097 Query: 403 FAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTL 462 L +G++++IDDFGTG+S+L YL+R +D LKID+ F+ + + + ++ A++ L Sbjct: 1098 LHRLKDIGIKLSIDDFGTGYSSLSYLKRLAVDKLKIDQSFVRDMVVDPEDAAIVSAIIQL 1157 Query: 463 AKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 L + +AEGVET Q + L N +QGY SRP+P +DF ++ Sbjct: 1158 GHTLQLTVIAEGVETRAQLQLLKSLECNEVQGYLFSRPIPAEDFSGLFEQ 1207 >UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLU1_AGRRK Length = 766 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 85/258 (32%), Positives = 138/258 (53%), Gaps = 1/258 (0%) Query: 256 YLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFI 315 ++ ++ E+ A+ R++F + YQP VD + R+ E L+RW H G + P FI Sbjct: 496 AIVRKKLSRTDELRQALLRDEFVLHYQPQVDVRTGRIVAAEALIRWNHSSEGLVYPGDFI 555 Query: 316 NFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLT 375 AE +IVP+ + + + R A + ++ +N++ + + L+ Sbjct: 556 ALAEETSLIVPIGEWVLKTACRQAKAWQDQGREPIRISVNVSARQFQEKRLIETVATALS 615 Query: 376 SLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLD 434 + LEITE ++K+ + L ++GV++A+DDFGTG+S+L L+RF L Sbjct: 616 ESGLDPIWLELEITESLIMKDLAGSIARMQELETLGVKLAVDDFGTGYSSLSALKRFPLS 675 Query: 435 YLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQG 494 LKIDR FI I + + A+++LA++L + +AEGVET EQAR+L E G N +QG Sbjct: 676 RLKIDRSFIADIPHDADDMAITAAIISLAQKLGLEVIAEGVETEEQARFLVESGCNEIQG 735 Query: 495 YWISRPLPLDDFVRWLKK 512 Y SRP+ F R L+ Sbjct: 736 YLFSRPVEEAQFNRMLEN 753 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 81/250 (32%), Positives = 131/250 (52%), Gaps = 1/250 (0%) Query: 262 MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQ 321 ++ + AI +EQ +V YQP + + V G E LLRW HP G I P FI AE Sbjct: 604 LQVLNALRQAIAQEQLHVHYQPQISLISGDVIGAEALLRWHHPELGNISPAEFIPIAEES 663 Query: 322 KMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHH 381 +I+ + + + + A + ++ + +N++ + ++L Sbjct: 664 GLILQIGEWVLRVAVAQAKKWHQLGLDKLIIAVNLSAVQFRHAGLPNLVMQILKEEDFPP 723 Query: 382 FQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDR 440 + LE+TE + + + A + LH GV ++IDDFGTG+S+L YL++F LKID+ Sbjct: 724 QYLELELTEGVAMHDPQGAIAMMNSLHERGVRMSIDDFGTGYSSLSYLKQFKAYKLKIDQ 783 Query: 441 GFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRP 500 F+ I T+ ++ A++ +AK L + T+AEGVET EQ +L E G + QGY S+P Sbjct: 784 SFVRDISTDAEDKAIVSAIIGMAKNLGLQTIAEGVETAEQQAFLREEGCHEAQGYHYSKP 843 Query: 501 LPLDDFVRWL 510 LP DF ++ Sbjct: 844 LPAADFETFI 853 >UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=4 Tax=Rhizobiaceae RepID=A6U700_SINMW Length = 772 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 82/277 (29%), Positives = 138/277 (49%), Gaps = 1/277 (0%) Query: 235 DVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTG 294 ++ A LG + V R++ E+ A+ E+F + +QP ++ R+ Sbjct: 491 AMYRAKELGRDNIQVFTEEMAARAHERLQWQEELREALAGEEFLLHFQPQMNLGTGRIFA 550 Query: 295 LEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGI 354 E LLRW HPV G I P FI AE +IVP+ R + + + Sbjct: 551 AEALLRWNHPVRGIISPSVFIPLAEETGLIVPIGDWALRAACRQLKAWQDAGLPPLIISV 610 Query: 355 NIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEI 413 N++ ++ + + ++L + LE+TE ++++ A L ++GV + Sbjct: 611 NVSARQFRERNWASRVAEILKETGLEARYLELELTESLIMQDVPGAIATMHALEAIGVHL 670 Query: 414 AIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAE 473 AIDDFGTG+S+L L+RF + LKIDR F+ I + + A+++LA++L + +AE Sbjct: 671 AIDDFGTGYSSLSALKRFPVRRLKIDRSFVTDIPLDADDMAITSAIISLAQKLGLRVIAE 730 Query: 474 GVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 GVE+ Q +L + G + +QGY+ SRPL + F L Sbjct: 731 GVESEAQVEFLQKAGCDEIQGYFFSRPLSAEAFESLL 767 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 83/300 (27%), Positives = 136/300 (45%), Gaps = 10/300 (3%) Query: 221 PLTVRLYADDWTWNDVWYAFLLGGM---------SGTVVGLLCYYLMSVRMRPGREIMTA 271 + + +Y D D Y M + + R+ + A Sbjct: 995 SIGIAMYPSDGMDFDKLYQSADVAMYRAKQDGRNNFRFFTSEMQARSARRLLLENALRQA 1054 Query: 272 IKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHL 331 + R QF + YQP + Q ++ G E LLRW HP G I P FI AE +I+ + + + Sbjct: 1055 LSRNQFELHYQPQISMQDGKIVGAEALLRWYHPELGSISPAEFIPVAEESGLILSIGEWV 1114 Query: 332 FELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITER 391 + + V IN++ + ++L I LE+TE Sbjct: 1115 LRTAVQQVKRWQDAGHPPVTVAINLSAVQFRQARLSELVMQILHEANLAPHWIELELTES 1174 Query: 392 DMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTET 450 + A + LH G+ ++IDDFGTG+S+L YL +F ++ LKID+ F+ + + Sbjct: 1175 VAMDNPLVAIGVMNDLHGCGIRMSIDDFGTGYSSLSYLRKFKVNKLKIDQSFVRDLADDI 1234 Query: 451 ITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 + ++ A++TLA + T+AEGVET Q +L +G N +QGY+ SRPL + F ++ Sbjct: 1235 ESRAIVTAIITLASSMGFQTIAEGVETAGQLAFLRLQGCNEVQGYYFSRPLTVALFEAFV 1294 >UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47AR1_DECAR Length = 655 Score = 410 bits (1054), Expect = e-113, Method: Composition-based stats. Identities = 111/428 (25%), Positives = 185/428 (43%), Gaps = 27/428 (6%) Query: 112 EMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTP 171 PL L L ++ ++D + TP + ++I N N + L Sbjct: 223 ARHDPLTNLPNRLALDAHLDTLLEGATPGINRLALLIIDLDNFKTINDSLGHHAGDRLLS 282 Query: 172 SLFYSSRQE-DYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIP--------- 221 L + D +G +L+N + ++ + G P Sbjct: 283 ELARRLGAQMDLTKRLFRLGGDEFVVVVDQLINEEAVIELVQQLAGGIGDPCNIDGHVLH 342 Query: 222 ----LTVRLYADD-----WTWNDVWYAFLLGGMSGTVVGLLCYYLMSV----RMRPGREI 268 + + LY +D + A +G M+ R+ E+ Sbjct: 343 CTSSIGISLYPEDGRDAQALIRNADTAMYYAKANGRNNHKFFTEPMNAAANKRLHLESEL 402 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A+ Q + YQP +D + +V G+E L+RWRHP+ G IPP FI AE +I+PL Sbjct: 403 WCALAENQLVLYYQPQIDLLSGKVVGVEALVRWRHPLRGLIPPAEFIPVAEECGLILPLG 462 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + R A E + +NI+ F + +Q +L ++ LEI Sbjct: 463 HWVLLTACRQAREWLDAGIDMGEMAVNISAHQFRQPEFISSVQAILAETGLPTGRLELEI 522 Query: 389 TERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE ++ E + A Q A L ++G+++AIDDFGTG+S+L YL RF LD LKIDR F+ + Sbjct: 523 TESTIMHEVDAAIQTLAQLRAMGIKLAIDDFGTGYSSLAYLRRFPLDRLKIDRSFLADVE 582 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 T+ + ++ +++ L + L + VAEGVE QA +L +QG+ +P+ ++ V Sbjct: 583 TDPDAASLVTSIVLLGRSLGLQLVAEGVENFAQAEFLRTLECERVQGFHFYQPVCAEEVV 642 Query: 508 ---RWLKK 512 R+L+ Sbjct: 643 GVGRFLEN 650 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 409 bits (1053), Expect = e-113, Method: Composition-based stats. Identities = 97/332 (29%), Positives = 154/332 (46%), Gaps = 10/332 (3%) Query: 190 GNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADD-----WTWNDVWYAFLLGG 244 G ++ +++L+ + + L+ DD + A Sbjct: 476 GAHDVTHVAAKLLAQLSAPYCVDTTELHTTASIGISLFPDDSADPAALMRNADTAMYHAK 535 Query: 245 MSGTVVGLLCYYLMSV----RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLR 300 +G M+ R+ R++ A+ R +F + YQP D++ +TGLE L+R Sbjct: 536 AAGRAKFQFYTDEMNRAATARLDLERKLRGAVARGEFELWYQPQFDSRHGHLTGLEALVR 595 Query: 301 WRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDH 360 WRHP G I P FI AE +IV + + R A + ++ +N++ Sbjct: 596 WRHPQDGLIAPLRFIPLAEETGVIVEIGTWVLREACRQARQWLDAGLPELRISVNLSVRQ 655 Query: 361 LHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFG 419 L + + L + + LEITE ++ EA L L ++GV IAIDDFG Sbjct: 656 LREKCLVDTVWTTLAASGLRPGLLELEITESAVMDNPDEAVALLQALKNLGVRIAIDDFG 715 Query: 420 TGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPE 479 TGHS+L YL+ F LD+LKIDR FI+ I + + ++ A ++LA L + +AEGVE+ Sbjct: 716 TGHSSLSYLKLFPLDHLKIDRSFISDIEHDANDTMIVAAAVSLAHNLGLSVIAEGVESAV 775 Query: 480 QARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 Q L E G + +QG+ SRP+ D L+ Sbjct: 776 QVARLRELGCDELQGFHFSRPVTADVVENLLR 807 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 409 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 86/362 (23%), Positives = 153/362 (42%), Gaps = 14/362 (3%) Query: 170 TPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYAD 229 +L E + + N + + ++ G + + +Y Sbjct: 356 KATLARLGGDEFGIVLPNMTQNRDAALLAQEVLTRVAQPITISEVEFAVGASIGMTVYPL 415 Query: 230 DWTWNDVWYAFLLGGMSGTVVGL---LCYYLMS------VRMRPGREIMTAIKREQFYVA 280 D V M +Y R+ + A+ R++F + Sbjct: 416 DGEKPSVLMRNAESAMYHAKQSGRNNFQFYRSELNTASLARILLESGLRNAVDRQEFLLF 475 Query: 281 YQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAA 340 YQP ++ ++ G+E L+RW+HP G + P FI AE +++P+ Q + R + Sbjct: 476 YQPQMELATGKLIGMEALIRWQHPEQGMVSPGEFIPLAEETGLVIPMGQWALKEACRQSK 535 Query: 341 ELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKE-QEA 399 V ++ +N++ F + + + + LE+TE + + +E Sbjct: 536 VWMDQTGVPLRISVNLSGIQFRLPDFTEMVMRTVGESGLPPHCLELELTESIAMGDVEET 595 Query: 400 TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAV 459 + L GV +AIDDFGTG S+L YL++F +D LKID+ F+ + + ++ A Sbjct: 596 LEKLTILSRFGVLLAIDDFGTGFSSLSYLKKFPIDTLKIDQSFVRNCTRDPEDAAIIRAF 655 Query: 460 LTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL----KKPYT 515 + LA LN+ +AEGVE EQ +L++ + +QGY+ RPL D F ++ K Sbjct: 656 INLAHSLNLEVIAEGVEHLEQLEFLAQESCDEIQGYFYGRPLSGDKFEMFMLDAFAKKAQ 715 Query: 516 PQ 517 PQ Sbjct: 716 PQ 717 >UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum sp. Group II RepID=B6AQA1_9BACT Length = 702 Score = 409 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 89/309 (28%), Positives = 150/309 (48%), Gaps = 10/309 (3%) Query: 214 ETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS---GTVVGLLCYYL------MSVRMRP 264 ++ + + L+ D T A M G + +Y ++R+ Sbjct: 380 QSLSVTTSIGISLFPHDGTTFRTLLASADSAMYYAKSKGSGQIQFYSGELNDSAALRIEM 439 Query: 265 GREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMI 324 ++ I++E+F + YQP V V +E L+RW HP G +PP FI AE +I Sbjct: 440 ENDLRRGIEKEEFVLYYQPKVTLATGEVESVEALVRWNHPEKGILPPHYFIPRAEETGLI 499 Query: 325 VPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQI 384 +PL + + + R+A ++ ++ +N++ ++ +I L S + Sbjct: 500 IPLGRWIMDRACREAVIWQQAGFSRLRVAVNLSALQFINQDLMKEILDALESSGLPPECL 559 Query: 385 VLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFI 443 LEITE ++++ E A + + + GV +AIDDFGTG+S+ YL++F LD LKIDR FI Sbjct: 560 ELEITESLLMEDPEGAMRTLSGIRQKGVHVAIDDFGTGYSSFSYLKKFPLDRLKIDRSFI 619 Query: 444 NAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPL 503 I + ++ ++TL LN+ +AEGVE+ Q L + QG++ SRPLP Sbjct: 620 TDICDNPNDAAIVRTIITLGHNLNLKVIAEGVESQAQLEMLKAMECDAYQGFFNSRPLPP 679 Query: 504 DDFVRWLKK 512 + LK+ Sbjct: 680 GELAERLKE 688 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 99/428 (23%), Positives = 182/428 (42%), Gaps = 29/428 (6%) Query: 114 DIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK-NSGVFAALNLNLTPS 172 D + +P + + +L ++ A++ + + N + ++ L Sbjct: 157 DYDVLTGLPNRRLLRERFEQLLAAAEREKSEIAVIFLDLDHFKRVNDSLGHSVGDELLCE 216 Query: 173 LFYS--SRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPL-------- 222 + S D +A + G+ + F+ + ++ R ++ P Sbjct: 217 VARRLDSVVRRIDTLARLGGDEFI--FAMPGFHTAAAVEVARRLVEVFSRPFEVAGHELT 274 Query: 223 -----TVRLYADDW-----TWNDVWYAFLLGGMSGTVVGLLCYYLMSV----RMRPGREI 268 + +Y D + A G M+ R+ + Sbjct: 275 VTPSLGISIYPHDGRDLETLLRNADTAMYRAKEMGRNAFQFYSSEMNTTTLDRLLMESNL 334 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A+ + +F + YQP+V+ + + G+E L+RW HP G I PD FI+ AE +I P+ Sbjct: 335 RRALVQNEFILHYQPLVNLETGLIIGVEALIRWLHPELGLIMPDRFIHVAEETGLINPIG 394 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + R A + +N+AP F + L + ++ LE+ Sbjct: 395 DWVLCEACRQAKAWCDAGLPPICMAVNVAPVQFRQAGFVEMVAGALATSGLDASRLELEL 454 Query: 389 TERDMLKEQEA-TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TER ++ + + + LH +GVE+++DDFGTG+S+L YL+RF + LKIDR F+N + Sbjct: 455 TERTVMHDADINMGTLSALHRMGVELSLDDFGTGYSSLAYLKRFPVGKLKIDRSFVNDLE 514 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 T+ + ++++ + L M +AEGVE EQ L + G + QGY+ SRP+ D Sbjct: 515 TDPDDWAIASTIVSMGRSLRMTVLAEGVEKVEQLALLRKMGCDMAQGYYFSRPMSADGMA 574 Query: 508 RWLK-KPY 514 L+ +P+ Sbjct: 575 DMLRLQPF 582 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 79/257 (30%), Positives = 131/257 (50%), Gaps = 3/257 (1%) Query: 258 MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 ++ R ++ AI+ QF + YQ VD ++ G E L+RW HP G + PD FI Sbjct: 634 IAKRTALEGDLRKAIENHQFQLHYQIQVD-ESRHPFGAEALIRWFHPEHGMVSPDQFIPL 692 Query: 318 AESQKMIVPLTQHLFELIARDAAELEKVL-PVGVKFGINIAPDHLHSESFKADIQKLLTS 376 AE +I+P+ + E + G +N++ F +Q L+ Sbjct: 693 AEESDLILPIGYWVLETACARIQRWQHDAKTSGFVLSVNVSAKQFRQTDFVNQVQSLIQQ 752 Query: 377 LPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDY 435 + + LE+TE +L ++ + L +GV+ ++DDFGTG+S+L YL+R LD Sbjct: 753 YEINPSLLKLELTESMLLDNIEDTIATMSALKELGVKFSLDDFGTGYSSLQYLKRLPLDQ 812 Query: 436 LKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGY 495 LKID+ F+ I + ++ ++ +A L++ +AEGVET EQ + LS +G QGY Sbjct: 813 LKIDQSFVRDIAVDASDRAIVRTIIAMAHSLDLDVIAEGVETEEQQKHLSSKGCKNFQGY 872 Query: 496 WISRPLPLDDFVRWLKK 512 +P+P++ F L+K Sbjct: 873 LFGKPVPIEQFETSLRK 889 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 90/336 (26%), Positives = 149/336 (44%), Gaps = 11/336 (3%) Query: 187 LIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS 246 + N + +N+ + + G + + LY D + + Sbjct: 481 IRSANDVADFAQEIIDLLNQSFQLASGQEVFVGASIGISLYPLDTDDATQLISNADAALY 540 Query: 247 -GTVVGLLCYYLMSV--------RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEV 297 G Y + R+ + ++R +F + +QPVV V G E Sbjct: 541 QAKEAGRNVYRFYTADLTRAAHERLGLEAALRRGLERGEFVLHFQPVVALDKGEVVGAEA 600 Query: 298 LLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIA 357 L+RW HP G I P FI AE +IVPL + + E R E + +N++ Sbjct: 601 LVRWNHPTEGMIAPLRFIPLAEETGLIVPLGEWVLESACRQGREWLDCG-RPLTIAVNLS 659 Query: 358 PDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAID 416 + A ++ +L + LEITE ++++ + A A L +GV ++ID Sbjct: 660 TRQFRAGDLTATVRDILDRTGFPAALLELEITESTVMEDADRAVATLAALKGLGVRLSID 719 Query: 417 DFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVE 476 DFGTG+S+L YL+RF +D LKIDR F+ I + ++ V+ +A ++ + +AEGVE Sbjct: 720 DFGTGYSSLAYLKRFAVDALKIDRSFVRDIADDENDRMIVATVVAMAHQMRLGVIAEGVE 779 Query: 477 TPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 T EQ +L G QGY + RP DF+ +++ Sbjct: 780 TAEQLAFLRSLGCEAYQGYLVGRPQAAADFLGAVER 815 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 119/489 (24%), Positives = 192/489 (39%), Gaps = 45/489 (9%) Query: 28 SCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTA-- 85 S L W ++ D +++ L +RL L Q PE Sbjct: 371 SGLPAHYVWILADITERKQAEDRMRHIAQ-HDALTGLPNRLALLMRL--AQLLPEARRHG 427 Query: 86 --RAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPN 143 A +++ F ++ D T EM + + L + + +A L G V Sbjct: 428 WTVAVMFIDLDRFKIIND--TLGHQVGDEMLREVACRLSNL-LRETDFVARLGGDEFVII 484 Query: 144 KPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYD-GVALIIGNTALSTFSSRLM 202 P+I + A ++ + +L + E ++ + IG + Sbjct: 485 LPSI---------SSPADAAIVSGKIISALSTAIEAEGHELHTSPSIGISIFPDDGPDGD 535 Query: 203 NVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRM 262 V + D + K AG Y F M+ + R+ Sbjct: 536 IVLKNADTAMYHAKAAGRNN---------------YQFFAADMN---------RTAAERL 571 Query: 263 RPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQK 322 R++ AI R + + +QP + TG+E LLRW HP G I P FI AE Sbjct: 572 NIERKLRHAIARNELSLVFQPQFRAEDTTPTGVEALLRWHHPTDGMISPARFIPVAEETG 631 Query: 323 MIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHF 382 MIV + + + A ++ +N++ L F + LT+ Sbjct: 632 MIVEIGDWVLATACHEMARWINAGLKPLRIAVNVSARQLRRRDFCETVANALTTSGLPAE 691 Query: 383 QIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRG 441 + LEITE +++ QEA + L +GV +AIDDFGTG+S+L YL+ F +D+LKIDR Sbjct: 692 LLELEITESSVMENPQEAIHILERLGRMGVTLAIDDFGTGYSSLAYLKLFPIDHLKIDRS 751 Query: 442 FINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPL 501 F+ I + + + LA L + +AEGVET +Q L G + +QG+ S+PL Sbjct: 752 FVADIEHDLNDRAIAFGTIALAHSLGLNVIAEGVETEDQHELLRANGCDEVQGFLFSKPL 811 Query: 502 PLDDFVRWL 510 +L Sbjct: 812 TGAAAFAFL 820 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 89/284 (31%), Positives = 146/284 (51%), Gaps = 1/284 (0%) Query: 235 DVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTG 294 +++A LG + + + R+ + A+ +F + YQP ++ + R+ G Sbjct: 679 AMYHAKSLGRNTYQFFSAEMSAVATERLALENALHQALSNGEFRLYYQPQIEVCSRRLIG 738 Query: 295 LEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGI 354 LE L+RWRHP G +PP FI AE +I + + + E R E + V + Sbjct: 739 LEALIRWRHPEVGWVPPLRFIPLAEETGIIHRIGRWVLEEACRQQREWQAAGLCIVPVAV 798 Query: 355 NIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEI 413 N++P L + F ++ LL+ + LE+TE ++++ + + L G Sbjct: 799 NLSPLQLQKDDFPEQVEALLSGCRLAPGLLELELTETAVMRDVGRMSDMLRKLKERGTRF 858 Query: 414 AIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAE 473 +IDDFGTG+S+L YL RF +D LKID+ FI + + + A++ LAK+L++ VAE Sbjct: 859 SIDDFGTGYSSLGYLNRFPVDKLKIDQSFIRDVTRREDHAAITRAIIALAKQLHLKVVAE 918 Query: 474 GVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQ 517 GVET EQ +L G + QG++ SRP+P D+ WL + Q Sbjct: 919 GVETAEQLEFLERAGCDGAQGFYFSRPVPADEIAGWLSREGAVQ 962 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 103/482 (21%), Positives = 191/482 (39%), Gaps = 45/482 (9%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ L K+L Y L ++R LQ T A E A +++ F Sbjct: 769 DITERKLAEAQIKHL-AYHDPLTGLSNRFSLQTQLDQTLALARREQRTLAVVFLDLDRFK 827 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 + D + ++ + + + + ++ +A L G + + Sbjct: 828 SINDS--LGHALGDQLLVEVARRLRDNVRDSDI-VARLGGDEF--------VVVLTEVGD 876 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNEL---TDMPVRE 214 +G + L R + +S + + + L D + Sbjct: 877 AAGAARVADKLLGA---LVPRYRIGGHALHTTASIGISLYPHDGDDADALMKNADTAMYH 933 Query: 215 TKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKR 274 K G V+ + + + + R++ ++ A++ Sbjct: 934 AKSQGRD-NVQFFTPEMNQS-----------------------VLKRLQFDHDLRVAVEA 969 Query: 275 EQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFEL 334 QF + YQP +++ + RV +E L+RW+HP G + P FI AE +I+PL + + Sbjct: 970 GQFELHYQPQINSTSGRVVKVEALVRWQHPREGLVSPAEFIPIAEETGLILPLGEWVLNE 1029 Query: 335 IARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDML 394 R + +N++ LHS + + + L + + LEITE + Sbjct: 1030 ACRQLRLWRDAGITDLTVAVNLSAHQLHSPALIPMVARTLGNHGLEGADLCLEITESVAM 1089 Query: 395 KEQEA-TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITS 453 ++ A L +G+ ++IDDFGTG+S+L YL+ +D LK+D+ F+ I Sbjct: 1090 RDTTASIAQLQALRDLGIHLSIDDFGTGYSSLSYLKLLPIDTLKLDQSFVCEIEFNPSDV 1149 Query: 454 PVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKP 513 + A + LA L + VAEG+ET Q R L+ +FMQGY S PLP + + ++++ Sbjct: 1150 AICAATIALAHSLGLEVVAEGIETETQRRLLASHRCDFMQGYLFSAPLPAERALAYIREQ 1209 Query: 514 YT 515 Sbjct: 1210 QA 1211 >UniRef50_A0LH12 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LH12_SYNFM Length = 702 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 84/255 (32%), Positives = 132/255 (51%), Gaps = 1/255 (0%) Query: 262 MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQ 321 + ++ A+ R + +V YQP +D + GLE L+RW HP G IPP FI AE Sbjct: 446 LTLEGDLRMALARRELFVEYQPEIDLKTGETVGLETLVRWDHPTLGLIPPLDFIPLAEET 505 Query: 322 KMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHH 381 +I+P+ + + + A K ++ +N++ + I K LT+ Sbjct: 506 GLILPIGEWILSIACMQNAIWHKSGLEPIRVAVNLSGHQFRQRNLIKTIAKTLTNSRLDP 565 Query: 382 FQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDR 440 + LEITE +++ +T L S+GV +A+DDFGTG+S+L YL RF LD LKIDR Sbjct: 566 QHLELEITESTLMENAASTIHTVKELKSMGVRLAVDDFGTGYSSLSYLRRFPLDVLKIDR 625 Query: 441 GFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRP 500 FI + + + A++ +A LN+ +AEGVE +Q ++L E + QGY+ RP Sbjct: 626 SFIRDVTINADDAAITRAIIAMAHNLNLEVIAEGVENEQQLQFLQENNCDMAQGYYYCRP 685 Query: 501 LPLDDFVRWLKKPYT 515 L + L+K + Sbjct: 686 LTPAKLTKHLEKQSS 700 >UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2X0_PELCD Length = 643 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 76/253 (30%), Positives = 137/253 (54%), Gaps = 1/253 (0%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R + + A+++++F++ YQP VD R+ LE L+RW+HP AG + P FI AE Sbjct: 366 RHKLEVGLRRAVRKKEFFLVYQPQVDLGTGRIVALEALVRWQHPEAGVLLPSTFIPVAEE 425 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +I + + + A + +++ ++ +N + I+++L Sbjct: 426 TGLIHIMGEWILRTACHQAMQWQRMGLPPMRIAVNFSARQFRQPDLVERIEQILLESGLP 485 Query: 381 HFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 + LEITE ++ E A + L + ++IAIDDFGTG+S+L YL+ F LD LKI Sbjct: 486 PHHLELEITESVFMENLESAIETLVDLKTRAIQIAIDDFGTGYSSLNYLKNFPLDRLKIA 545 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 + F+ I + + +++ ++ +A RL + +AEGVET EQ +L +G + MQG++ +R Sbjct: 546 QDFVRDIPDDEDDATIIETIMAMANRLGIKVLAEGVETMEQVTFLRRKGCHEMQGFYFAR 605 Query: 500 PLPLDDFVRWLKK 512 P+ ++ +L + Sbjct: 606 PMQAEEIAGFLNQ 618 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 99/325 (30%), Positives = 157/325 (48%), Gaps = 6/325 (1%) Query: 196 TFSSRLMNVNELTDMPVRETKIAGIP-LTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLC 254 S L + + P+ + GI + + + A +G Sbjct: 904 ALRSGLNQTYLIDNKPLHSSPSIGISLFPTDGDSVEALMKNADMAMYRAKAAGRNNYQFF 963 Query: 255 YYLMSV----RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIP 310 M+ R + + AI + + YQP VD + +V G+E L+RW+HP G + Sbjct: 964 TAAMNTLVTERQQIETGLRQAIACNELLLYYQPQVDISSGQVVGVEALIRWQHPELGLVA 1023 Query: 311 PDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADI 370 PD FI AE MI+P+ Q + E AE G++ +N++ L ++ ADI Sbjct: 1024 PDRFIPIAEEIDMIIPIGQWVLENALAQLAEWRDKGAKGLRMAVNLSAHQLRKDTIVADI 1083 Query: 371 QKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLE 429 +LT + LEITE ++ E +L A L G+E+AIDDFGTG+S+L YL+ Sbjct: 1084 INVLTKHKLGKGALELEITESVAMQYPEQNAKLLAELRQHGIELAIDDFGTGYSSLSYLK 1143 Query: 430 RFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGV 489 LD LK+DR F+ I ++ + + A +++A L + VAEGVE Q LS G Sbjct: 1144 LLPLDRLKLDRSFVKDIESDPNDAAISAATISMAHELGLTVVAEGVENEAQLVLLSGMGC 1203 Query: 490 NFMQGYWISRPLPLDDFVRWLKKPY 514 + +QGY+ S+PL DD R++++ + Sbjct: 1204 DLVQGYYFSKPLAADDCFRFIERNF 1228 >UniRef50_B4W3W9 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W3W9_9CYAN Length = 560 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 78/250 (31%), Positives = 128/250 (51%), Gaps = 1/250 (0%) Query: 262 MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQ 321 ++ A++R++F + YQP V+ ++ G E L+RW HP G I P FI AE Sbjct: 300 FELEIQMRQALERQEFQLYYQPKVNLLTGQIEGAEALVRWNHPQRGIISPVEFIPLAEKT 359 Query: 322 KMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHH 381 +IVPL + + A + ++ +N++P + + + +L + Sbjct: 360 GLIVPLGEWVLRQACHQARVWQDQGIYPLRIAVNLSPRQFNQSNLTNFVVDILHETGLNP 419 Query: 382 FQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDR 440 + LE+TE +++ E A ++G+ I+IDDFGTG+SAL L++F D LKIDR Sbjct: 420 HYLELELTESTLVQNPESAIATLQTFKALGIRISIDDFGTGYSALSQLKKFPFDVLKIDR 479 Query: 441 GFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRP 500 F+ + ++ + A+L +A+ L + VAEGVET Q +L + +QGYW S P Sbjct: 480 SFVCQLTEDSRDEAITTAILQMARSLKLKVVAEGVETLSQLNFLKGHQCDEIQGYWFSPP 539 Query: 501 LPLDDFVRWL 510 L + F L Sbjct: 540 LSAEAFADLL 549 >UniRef50_C6E011 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=C6E011_GEOSM Length = 869 Score = 407 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 89/306 (29%), Positives = 145/306 (47%), Gaps = 10/306 (3%) Query: 221 PLTVRLYADDW-TWNDVWYAFLLGGMSGTVVGLLCYYLMS--------VRMRPGREIMTA 271 + + +Y D T ++ L G Y + R+ ++ TA Sbjct: 559 SIGISVYPTDGETVQELMKNADLAMYHAKSAGRNSYQFFTQEMNLTVQARLVLESDLRTA 618 Query: 272 IKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHL 331 ++R++ + YQP +D ++ V G+E LLRWRHPV G + PD FI AE +I+ + + Sbjct: 619 LERDEMMLHYQPQIDLKSGEVVGVEALLRWRHPVRGAVAPDVFIPVAEDTGLILSIGEFA 678 Query: 332 FELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITER 391 + A ++ +N++ + + + +L + + LEITE Sbjct: 679 LKSACEQLALWISQGLSPLRMAVNLSARQFKQSNLPSLLADILAATGVAAHLLELEITES 738 Query: 392 DMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTET 450 + + A L +GVE+AIDDFGTG+S+L YL+ F ++ LKIDR F+ I T++ Sbjct: 739 SAMDDPNTAIVHLRTLREMGVELAIDDFGTGYSSLSYLKLFPVNRLKIDRSFVRGIDTDS 798 Query: 451 ITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 + + A + LA L VAEGVET Q R+L + + +QGY+ S PL +L Sbjct: 799 EDAEIAAATIALAHNLGKEVVAEGVETEAQCRFLRGQQCDILQGYFFSEPLSAAGIASYL 858 Query: 511 KKPYTP 516 P Sbjct: 859 AANRRP 864 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 407 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 105/381 (27%), Positives = 173/381 (45%), Gaps = 28/381 (7%) Query: 140 MVPNKPAIVIWYRNPLLKNSGVFAALN--LNLTPSLFYSSRQEDYDGVALIIGNTALSTF 197 MV + A + + AAL+ L R IG T Sbjct: 563 MVQDLAADSMVVAQVEAVAGKILAALDCPYRLVFDAELGRRNALNYHCTASIGITLFGAH 622 Query: 198 SSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYL 257 S+ + + + D+ + + K +G +R + + Sbjct: 623 STNVDELLKQADLAMYQAKDSGRN-AIRFFDPEMQ-----------------------AA 658 Query: 258 MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 ++ R+ ++ A++ QF + YQP V ++ R+TG E LLRW H G +PP FI Sbjct: 659 ITSRVALEADLREAVEAGQFQLYYQPQVVGESHRLTGAEALLRWHHSRRGMVPPSEFIPL 718 Query: 318 AESQKMIVPLTQHLFELIARDAAELE-KVLPVGVKFGINIAPDHLHSESFKADIQKLLTS 376 AE +I+PL Q + E A + + +N++ + F + +L Sbjct: 719 AEETGLILPLGQWVLETACAQLATWASQPEMAQLTVAVNVSAHQIRQTDFVDQVLAVLAD 778 Query: 377 LPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDY 435 A+ ++ LE+TE ++ ++ L S GV ++DDFGTG+S+L YL+R LD Sbjct: 779 AGANPQRLKLELTESLLVSNVEDIIAKMTLLKSRGVGFSLDDFGTGYSSLSYLKRLPLDQ 838 Query: 436 LKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGY 495 LKID+ F+N + T+ + + ++ LA+ L + +AEGVET EQ +L+E G + QGY Sbjct: 839 LKIDQSFVNEVLTDANDAAIAKMIVALAESLGLAVIAEGVETEEQRNFLAESGCHAYQGY 898 Query: 496 WISRPLPLDDFVRWLKKPYTP 516 S+PLPL F +W+ KP P Sbjct: 899 LFSKPLPLAGFEQWIGKPTAP 919 >UniRef50_A0L613 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L613_MAGSM Length = 577 Score = 407 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 78/256 (30%), Positives = 134/256 (52%), Gaps = 2/256 (0%) Query: 259 SVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFA 318 R + AI++ + + YQP VD + G E L+RW+HP G I P FI A Sbjct: 318 RERFELETHLRQAIEKNELVLYYQPQVDLHDGTIIGAEALIRWKHPERGLISPAQFIPVA 377 Query: 319 ESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLP 378 E +IVP+ + + R A +++ V+ GIN++ ++ A +++LL Sbjct: 378 EETGLIVPIGEWVMRTAIRQIAIWKELGVTPVRVGINLSALQFKRQNLAALVEELLNEHD 437 Query: 379 AHHFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLK 437 + LEITE ++ + A ++ + ++GV+++IDDFGTG+S+L L +F LK Sbjct: 438 IDPSLVDLEITESAIMDDVGRAIEMLKRISALGVKLSIDDFGTGYSSLSQLRQFPFQTLK 497 Query: 438 IDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWI 497 IDR F+ + + + ++ A++ +A L + EG+ET Q + E N MQG+ Sbjct: 498 IDRSFVTDLES-SGDKAIVSAIIAMAHSLEQTVIVEGLETSAQLTIMKELNCNEMQGFLF 556 Query: 498 SRPLPLDDFVRWLKKP 513 S+PLP ++F L++ Sbjct: 557 SKPLPAEEFTALLREG 572 >UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF sensor n=3 Tax=Cyanobacteria RepID=B7KHV9_CYAP7 Length = 1262 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 89/326 (27%), Positives = 147/326 (45%), Gaps = 9/326 (2%) Query: 199 SRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYL 257 +L+N + + G L + L D ++ M G Y + Sbjct: 519 QKLLNDFQEPFYVQSQAIYLGASLGIALAPYDGDTAEILLKNAESAMYEAKKQGKNTYQI 578 Query: 258 MS-------VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIP 310 ++ ++ AI+R +F + YQP +D ++ G+E L+RW+HP G + Sbjct: 579 YRPGSDHDKNKLILEADLRKAIERNEFVLHYQPQIDLNTRKLIGVEALIRWQHPSLGMVS 638 Query: 311 PDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADI 370 P FI AE +I PL + + +K ++ +N++ L + A I Sbjct: 639 PALFIPLAEETGLICPLGEWVLRTACHQYRIWQKAGFPKIQMAVNLSAFQLQQDDIVARI 698 Query: 371 QKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLE 429 +L + LEITE +++ E T + L +G++IAIDDFGTG+S+L L+ Sbjct: 699 AMILKETGMTPSDLELEITETTVMENLEQMTAILEQLKQMGIKIAIDDFGTGYSSLNVLK 758 Query: 430 RFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGV 489 +D LKID+ F+ I ++ + + ++ L K + +AEGVET Q +L Sbjct: 759 HLPVDTLKIDKSFVQDITLDSNDAKLCQGIIMLGKAFELDVLAEGVETFTQLEFLRSLNC 818 Query: 490 NFMQGYWISRPLPLDDFVRWLKKPYT 515 + QGY ISRPL D + L K T Sbjct: 819 DRAQGYLISRPLAPDALIELLLKAQT 844 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 72/251 (28%), Positives = 134/251 (53%), Gaps = 1/251 (0%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+ + A++R +F++ YQ + + ++ G+E L+RW+HP G I P FI AE Sbjct: 326 RLMLENNLRKALERHEFFLHYQAKRNLKTGKIAGVEALVRWQHPELGTISPAHFIPLAEE 385 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +IV L + + ++ + +N++ ++ DI L Sbjct: 386 TGLIVHLGRWVLRAACTQGVIWQQQGLPPICIAVNLSARQFFDDNLINDIANALRESGLA 445 Query: 381 HFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 + +EITE ++++ E A ++ + ++GV +AIDDFG G+S+L +++RF +D LK+D Sbjct: 446 PELLEMEITEGMIMQDAERAIRILTGIKALGVRLAIDDFGVGYSSLAHIKRFPIDTLKVD 505 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 FI I + +A++ + K L++ +AEGVET EQ +L + + QGY+ S+ Sbjct: 506 SSFIRDIPANREDRAITEAIIAMGKTLSLTVIAEGVETQEQENFLRDSACDQTQGYYFSK 565 Query: 500 PLPLDDFVRWL 510 P+ ++F R++ Sbjct: 566 PVSPEEFTRFM 576 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 75/252 (29%), Positives = 128/252 (50%), Gaps = 1/252 (0%) Query: 260 VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAE 319 R+ ++ A+++ F + YQP+VD + + G E L+RW+HP G I P FI AE Sbjct: 772 ARVHLEADLRMAVEQRAFELHYQPIVDCASGALVGAEALIRWKHPERGMISPLEFIPVAE 831 Query: 320 SQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPA 379 +IVP+ + + + R + ++ +N++ ++ LL Sbjct: 832 ECGLIVPIGEWVLREVVRQRRDWLARGHPPLRLTLNVSGVQFREAGLPELVRTLLAEFGT 891 Query: 380 HHFQIVLEITERDMLKEQEATQL-FAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKI 438 +V EITE ++ E + + G+ A+DDFGTG S+L YL+RF +D +KI Sbjct: 892 ARSSLVFEITESVLMGGSENVEARMCDIKEQGICFALDDFGTGFSSLSYLKRFPVDIVKI 951 Query: 439 DRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWIS 498 DR F+ + + +++A++ +A L + AEGVE+ EQ +L G +++QGY I Sbjct: 952 DRSFVRDCPDDRNDATLVEAIINMAHSLGLRVTAEGVESAEQREFLRALGCDYLQGYLIG 1011 Query: 499 RPLPLDDFVRWL 510 +PL D F + Sbjct: 1012 KPLAADAFEALM 1023 >UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC Length = 1499 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 75/249 (30%), Positives = 120/249 (48%), Gaps = 1/249 (0%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+ E+ A+++ + + YQP ++ + LE L+RW HP G IPP FI AE Sbjct: 1225 RLGLEAELRRALEQNELALYYQPQINLGTGEIATLETLIRWHHPEHGLIPPSEFIPLAEE 1284 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +I + + + +N++ L E I +L Sbjct: 1285 TGLIASIGAWILREACTQMQSWLQRGFGPFHIAVNVSGRELEREDLVDKIVTILKETGLP 1344 Query: 381 HFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 + LEITE ++K A F L +G++ AIDDFGTG+S+L YL+ F +D LKID Sbjct: 1345 PKWLELEITESVVMKGAGAAIPKFRRLREMGIKFAIDDFGTGYSSLNYLKSFPVDILKID 1404 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 R FI+ + + + ++ ++ LA L + VAEGVET Q +L + QG+++S Sbjct: 1405 RCFIHDVVSNPDDAAIIKGIIALAHSLRLKVVAEGVETQAQEEFLKAHQCDRFQGFYLSE 1464 Query: 500 PLPLDDFVR 508 PL + + Sbjct: 1465 PLSAAEIEQ 1473 >UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVV8_DESAC Length = 764 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 83/302 (27%), Positives = 142/302 (47%), Gaps = 10/302 (3%) Query: 221 PLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMSVRM--------RPGREIMTA 271 + + Y D + M+ G Y M ++ A Sbjct: 461 SIGISSYPQDGESPKTLMSHADIAMTRAKSEGKDRYQFFEREMTQTTKRVFELENDLRKA 520 Query: 272 IKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHL 331 + R + V YQP + + ++TG+E L+RW+HP G I P FI AE +IV + + + Sbjct: 521 VARNELRVYYQPQIQLDSQQITGMEALVRWQHPQRGLISPADFIPLAEETGLIVSIGEWV 580 Query: 332 FELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITER 391 + A V +N++P ++ ++ K L + + LE+TE Sbjct: 581 LRQACQQVAMWHDQGLPAVTVAVNLSPLQFRHKALVRNVAKTLKETGINPACLELEVTES 640 Query: 392 DMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTET 450 ++ + +T L +G +AIDDFGTG+S+L YL F L LKID+ FI + ++ Sbjct: 641 MIMDSIDKSTATMIELTELGAGLAIDDFGTGYSSLSYLRYFPLTKLKIDKSFIERVTSDE 700 Query: 451 ITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 + + +V+ LA LN+ VAEG+E +Q ++L +R + QG+ SRP+P +D + L Sbjct: 701 HDAALATSVIALAHSLNLKVVAEGIEHEDQVQFLVKRSCHQGQGFLFSRPVPAEDMEQLL 760 Query: 511 KK 512 ++ Sbjct: 761 RQ 762 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 78/259 (30%), Positives = 137/259 (52%), Gaps = 1/259 (0%) Query: 259 SVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFA 318 + R+ + A+ E+ + YQP+VD + V G+E L+RW+ P +PP FI A Sbjct: 531 NERLIMENRLRYALSAEELILHYQPLVDARTGYVVGVEALVRWQPPGKAMVPPGKFIPIA 590 Query: 319 ESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLP 378 E +IVPL + + + A + +N++ SE+ +Q++L Sbjct: 591 EETGLIVPLGEWVLRTACKQARAWIDAGLSPLVMAVNLSVRQFQSENLVGMVQRILEETQ 650 Query: 379 AHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLK 437 + LE+TE ++ E + + L ++GV +AIDDFGTG+S+LIYL+RF +D LK Sbjct: 651 LPADYLELELTESMFMEHVEQSIETLNKLKTLGVHLAIDDFGTGYSSLIYLKRFPIDKLK 710 Query: 438 IDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWI 497 ID+ F+ + + + ++ +A+ L + +AEG+E+ EQ +L ++ ++ QGY Sbjct: 711 IDQRFVRDLADDHNDREIAATIIAMARGLKLGVLAEGIESEEQLAFLRQQDCDYYQGYLF 770 Query: 498 SRPLPLDDFVRWLKKPYTP 516 RP+P + WL++ P Sbjct: 771 HRPVPAIELEAWLREHSVP 789 >UniRef50_C6D8Q9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8Q9_PAESJ Length = 633 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 80/250 (32%), Positives = 128/250 (51%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+ E+ AI+R++F + YQP D + + G+E L+RWRHP G IPP FI AE Sbjct: 378 RLTLQHEMYRAIQRKEFILLYQPQYDLVSGMMVGVEALVRWRHPAKGMIPPGEFIPIAEE 437 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 MIV + + E R + + +N++ + + + +L Sbjct: 438 SGMIVQIGDWVLEEACRQNKAWQDAGLPPMPVSVNLSIRQFVQQDLASKVASVLEKTGLK 497 Query: 381 HFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDR 440 + LEITE + ++ L +GV I++DDFGTG+S+ YL+ F +D LKIDR Sbjct: 498 PEYLDLEITESMTMDTGHVSRCLLELTDMGVGISVDDFGTGYSSFHYLKNFPIDRLKIDR 557 Query: 441 GFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRP 500 F+ I + + ++ A++ +A LN+ +AEGVE EQ +L + + MQGY+ S P Sbjct: 558 SFVRDIQQDPSDAEIVAAIIAMAHNLNIQVIAEGVENAEQMEFLRKHNCDEMQGYFWSPP 617 Query: 501 LPLDDFVRWL 510 + D + L Sbjct: 618 VSSTDIEQML 627 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 80/336 (23%), Positives = 150/336 (44%), Gaps = 10/336 (2%) Query: 187 LIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWT-----WNDVWYAFL 241 + N + + + +P + + L+ D A Sbjct: 782 IKDSNEPAMVAQTLIDLLATPFSLPSGHEIFINTSIGISLFPTDANSVTELIQHADMAMY 841 Query: 242 LGGMSGTVVGLL----CYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEV 297 L G + R+ ++ A+ +F + YQP++D + +V G+E Sbjct: 842 LAKQEGRNTYRYHTDALSIAANERLVLETQLRQALSAGEFVLHYQPLIDARKGQVMGVEA 901 Query: 298 LLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIA 357 L+RW+ P + P FI AE +IVPL + + + +N++ Sbjct: 902 LVRWQPPDKAMVSPGKFIPIAEETGLIVPLGEWVLRTACAQGRAWMDADFPPLVMAVNLS 961 Query: 358 PDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAID 416 SE+ I+++L + LE+TE ++ E + ++ L S+GV ++ID Sbjct: 962 VRQFQSENLVELIRQVLEETKLPAACLELELTESMFMEHAEQSIEILKTLKSLGVRLSID 1021 Query: 417 DFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVE 476 DFGTG+S+L YL+RF +D LKID+ F++ + + + ++ +A+ L + +AEGVE Sbjct: 1022 DFGTGYSSLTYLKRFPIDKLKIDQSFVHGLAYDPNDREIAATIIAMARNLKLDVLAEGVE 1081 Query: 477 TPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 + +Q L++ G ++ QGY RP+P + W ++ Sbjct: 1082 SEQQLDILNQHGCDYYQGYLFHRPVPAQELEVWFRE 1117 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 97/363 (26%), Positives = 161/363 (44%), Gaps = 22/363 (6%) Query: 175 YSSRQEDYDGVALIIGNTALSTFSSRLMNVNE--LTDMPVRETKIAGI----------PL 222 S + D VA + G+ + + L D RE + + Sbjct: 538 LSHAVRESDIVARLGGDEFVIALPGIGSPADAAHLADDITREISAPYLIKGQELRTSPSI 597 Query: 223 TVRLYADDW-----TWNDVWYAFLLGGMSGTVVGLLCYYLMSV----RMRPGREIMTAIK 273 + +Y D + A +G M++ RM ++ AI Sbjct: 598 GICVYPGDGSEIGDLLKNADVAMYHAKANGRGNYQFFTEDMNIATTERMCLESDLRLAIT 657 Query: 274 REQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFE 333 R +F + YQP +D ++ + G+E L+RW+HP G + P FI AE MI + + E Sbjct: 658 RREFLLHYQPQLDLRSGTIVGVEALIRWQHPTRGLVSPADFIPIAEESGMIAAIGDWVLE 717 Query: 334 LIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDM 393 R + ++ IN++ ++ A I +LL + ++ LE+TE Sbjct: 718 EACRQLKVWQNRGITHLRMSINLSAGQFLDKTLPARIHELLAANDLSADRLDLEVTESMS 777 Query: 394 L-KEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETIT 452 + E+ + L S G+ ++IDDFGTG+S+L YL+ + LKIDR F+ I ++ Sbjct: 778 MASPDESISVMKTLSSSGLTLSIDDFGTGYSSLAYLKLLPIHTLKIDRSFVKDIESDPND 837 Query: 453 SPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 + + D + LA +L + VAEGVET Q ++L G +QGY IS+PLP D R+++ Sbjct: 838 ADICDVTVLLAHKLGLEVVAEGVETEAQLKFLLSIGCEKVQGYLISKPLPADQAERFIRN 897 Query: 513 PYT 515 Sbjct: 898 NPP 900 >UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNY7_9PROT Length = 1003 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 76/251 (30%), Positives = 137/251 (54%), Gaps = 3/251 (1%) Query: 265 GREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMI 324 +I ++R +F + YQP V + G+E L+RW+HP G + P FI AE +I Sbjct: 715 EGDIRKGLERGEFRLFYQPQVSADDGTIVGVEALIRWQHPQQGLVSPARFIPVAEESGLI 774 Query: 325 VPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQI 384 VP+ + + R + ++ + +N++ L + F + ++ + ++ Sbjct: 775 VPIGEWVLTAACRQVRQWQQSGVPVPRVAVNVSARQLGAAGFLDTVAAIIVATGIAADRL 834 Query: 385 VLEITERDMLKEQEATQL--FAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGF 442 LE+TE ++ + EA ++ + L ++GV +IDDFGTG+S+L Y++RF + LKID+ F Sbjct: 835 ELELTESILM-DPEAKRIKGLSRLRAMGVHFSIDDFGTGYSSLSYIKRFPIGTLKIDQSF 893 Query: 443 INAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 ++ + + + + A++++A+ LN+ VAEGVET EQ +L +QGY S PLP Sbjct: 894 VHGLPQDADDAGITTAIISMARSLNLEVVAEGVETREQLAFLQRALCPKLQGYLFSYPLP 953 Query: 503 LDDFVRWLKKP 513 D+ L++ Sbjct: 954 PDEMEAILRRG 964 >UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4VY11_9CYAN Length = 1393 Score = 406 bits (1045), Expect = e-112, Method: Composition-based stats. Identities = 99/383 (25%), Positives = 165/383 (43%), Gaps = 33/383 (8%) Query: 167 LNLTPSLFYSSRQEDYDG------VALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGI 220 +L S+ E G +G + + N TD+ + Sbjct: 1013 GHLVGDRLLSAIAERLQGCLRPSDTLARLGGDEFTILLDDIPNTAAATDIAKSIHQTLES 1072 Query: 221 PLTVRLYADDWT------------------WNDVWYAFLLGGMSGTVVGLLCYYLMSVR- 261 + Y T D A + GT ++ MS R Sbjct: 1073 SFNLDGYEVFATASIGIALSGMGYHRAEDLLRDADTAMHRAKLQGTACYVMFDTAMSGRA 1132 Query: 262 ---MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFA 318 +R E+ AI+R++ V YQP++ ++TG E L+RW+HP G I P AFI A Sbjct: 1133 LAQLRLETELRWAIERQELEVYYQPIISLGTGKITGFEALVRWQHPEQGMISPGAFIPLA 1192 Query: 319 ESQKMIVPLTQHLFELIARDAAELEKVLP--VGVKFGINIAPDHLHSESFKADIQKLLTS 376 E +I+P+ Q + + ++ P + +N++ + I +++ Sbjct: 1193 EETGLIIPIGQWVLRTSCYQLRQWQQQFPHYPPLTMSVNLSGKQFSQTNLIEQIAQIIQE 1252 Query: 377 LPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDY 435 + + LEITE +++ + A+ L L ++ +++ IDDFGTG+S+L L +F +D Sbjct: 1253 TEVNPSTLKLEITESGIMEHSDSASALLERLKALNIQLYIDDFGTGYSSLSRLHQFPIDA 1312 Query: 436 LKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGY 495 LKIDR F++ +G ++ A++TLA L M VAEG+ET Q L R + QGY Sbjct: 1313 LKIDRSFVSRMGDAGENGEIVQAIVTLAHNLGMDVVAEGIETNMQLAQLRGRRCEYGQGY 1372 Query: 496 WISRPLPLDDFVRWLKKPYTPQW 518 + S+PL + + PQW Sbjct: 1373 FFSKPLNRQAAEQLMMN--LPQW 1393 >UniRef50_C5V2W0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V2W0_9PROT Length = 1275 Score = 406 bits (1045), Expect = e-112, Method: Composition-based stats. Identities = 92/330 (27%), Positives = 150/330 (45%), Gaps = 7/330 (2%) Query: 191 NTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVV 250 N + ++ + D V+ + GI + D T A L V Sbjct: 809 NRTAELIAQKIYQPLTVADQSVQLSARMGISVYPIDGNDATTLMKHADAALADAKQCGVR 868 Query: 251 GLLCYYLMSVR------MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHP 304 +Y S+ + G E+ AI + + + YQP VD ++ G E L+R HP Sbjct: 869 NSFRFYSSSMNEHAHKLLTMGAELRNAISQNRLVLHYQPQVDIITGQIIGAEALIRINHP 928 Query: 305 VAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSE 364 G I P FI+ AE +I+P+ + R + + + IN++P LH Sbjct: 929 ERGIISPGEFISVAEETGLIIPMGTWVIREACRQMQQWHLDKNIELTIAINLSPLQLHQS 988 Query: 365 SFKADIQKLLTSLPAHHFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHS 423 + L + + LE TE ++K E + ++G+ ++IDDFGTG+S Sbjct: 989 DLPEIVSLALHDSGLNARYLELEFTESAIMKNVRETVAIMNKFKAMGLHLSIDDFGTGYS 1048 Query: 424 ALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARW 483 +L YL++F +D LKID+ F++ I + + ++ A++ L + L M T+AEGVET Q + Sbjct: 1049 SLSYLKQFPVDKLKIDQSFVSNITQDPNDAAIVQAIIALGRTLGMTTIAEGVETEAQLGY 1108 Query: 484 LSERGVNFMQGYWISRPLPLDDFVRWLKKP 513 L MQGY S PLP ++F L + Sbjct: 1109 LRSVNCKEMQGYLYSAPLPAEEFAALLVRG 1138 >UniRef50_A0KT96 EAL domain protein n=9 Tax=Shewanella RepID=A0KT96_SHESA Length = 519 Score = 406 bits (1045), Expect = e-112, Method: Composition-based stats. Identities = 146/492 (29%), Positives = 246/492 (50%), Gaps = 21/492 (4%) Query: 30 LQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAF 89 + +A + K + + L+ + LT + C +LT F Sbjct: 40 FSYFIAVYLAHNKATEIGEFNLERLEAILKLSDQIGEYAMNLTEEDC----GKLTEYMRF 95 Query: 90 SMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVI 149 R +L DK +CSS TG++++ + +D K+ I+P TP P PAI+ Sbjct: 96 RPYFRGVLLFNDKSFYCSSTTGDLNL-PLNTLLPVDRLKDGSQHIVPETPARPGVPAIIT 154 Query: 150 WYRNPLLKNSGVF-----AALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNV 204 ++N + V ++ + P +F + + G+ A + ++ V Sbjct: 155 TFKNEQTQYGAVVVFEGQYLIDSFIQPDVFPRAVKTVVLGLHGATLPAAPQFSGNEVITV 214 Query: 205 NELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGG---MSGTVVGLLCYYLMSVR 261 V + + + ++ L+ W+ W AF L + V+ L ++ + R Sbjct: 215 FAGDKFEVHQDFVILLEISKALF-----WHFYWIAFGLLLPLIFTLFVLSSLLFWKRNGR 269 Query: 262 MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQ 321 +I + I+ ++F++ YQPVV ++ + G+E L+RW+HP G + PD FI AE Sbjct: 270 HSLADDIKSGIENQEFFLVYQPVVSSEDGKAKGVEALVRWQHPQMGLVRPDLFIPIAEES 329 Query: 322 KMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHH 381 ++IVPLT ++FE D +L+ L + G N+AP+H +A + L + Sbjct: 330 QLIVPLTNYIFERALADFRQLQ--LTSDFRIGFNVAPEHFIQSDIEAKFRYLRDAFAEIG 387 Query: 382 FQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRG 441 Q ++EITER +L + + A L +G+ +AIDDFGTG + L L+ FTLDYLKID+ Sbjct: 388 VQPLIEITERQLLT-VDMCERIAALRELGILVAIDDFGTGQTTLSLLQTFTLDYLKIDKC 446 Query: 442 FINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPL 501 FI+ IG +++TS VLD ++ L ++N + VAEGVET EQA +L R V+F+QGY ++P+ Sbjct: 447 FIDTIGQDSVTSHVLDTIIELCHKMNYVAVAEGVETQEQADYLISRDVHFLQGYLYAKPM 506 Query: 502 PLDDFVRWLKKP 513 L++ WLK+ Sbjct: 507 KLNELELWLKEH 518 >UniRef50_A6AP35 Protein rtn n=4 Tax=Vibrionales RepID=A6AP35_VIBHA Length = 506 Score = 406 bits (1045), Expect = e-112, Method: Composition-based stats. Identities = 136/515 (26%), Positives = 234/515 (45%), Gaps = 23/515 (4%) Query: 1 MFIRAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFAD 60 MF L+L + ++ + + + V + +D Sbjct: 1 MFANNKKNSTNLVL----LSFLPSLFALAFLYFSFGQSLDELSQLKASSVVQEVDEILEY 56 Query: 61 LKSTTDRLQPLTLDT--CQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLN 118 + ++ L C+ + L A VR+ L KD +C+S G+ + Sbjct: 57 GEEANNQSLMLLEKPDSCEAHSVALRHLVATVPYVRSANLAKDNVIYCTSIWGD-----S 111 Query: 119 ELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSR 178 L + + ++ G+ + P IV+ R+ +++ +L L L Sbjct: 112 HYQYDLADYSSGRLRLMHGSKVDAKHPLIVV--RSESGEDTAFSGIDSLYLRQLL----E 165 Query: 179 QEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYAD-----DWTW 233 D L +G L + L + + A P +V D W Sbjct: 166 PHDKLHSYLAVGEQWLDSKDLVLKVNPADRLVAWHKVSSANFPYSVYSGFDYPSMISAFW 225 Query: 234 NDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVT 293 + + T+ L +L EI A++ ++F QP++++ + Sbjct: 226 ERDNQYIIAILIIQTLFALYLLWLSRRPSNLYLEIERAMENKEFVPYAQPILNSANREIQ 285 Query: 294 GLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFG 353 G+E+LLRW+HPV G + PD FI AE +I+P+T L A++ + LP G Sbjct: 286 GIEILLRWQHPVQGTVRPDLFIPKAERSGLILPITHQLMINTAKEIRLWKDKLPKPFHVG 345 Query: 354 INIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVE 412 +NI+P H + + Q+ + + + +VLE+TER+ L + T ++F + S+G + Sbjct: 346 VNISPQHCSKGTLVSACQEFIDIVDSKDVTLVLELTEREALNYCDLTDEIFTQIKSMGCK 405 Query: 413 IAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVA 472 IAIDDFGTGHS+L+ L + LDYLKID+ F+ IG +TIT +L ++TL+ L++ VA Sbjct: 406 IAIDDFGTGHSSLVNLRKVDLDYLKIDQTFVRDIGVDTITGHLLQNMITLSHDLSLDVVA 465 Query: 473 EGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 EGVET QA +L ERGV+++QG+ ++P+PL +F+ Sbjct: 466 EGVETEFQAEYLKERGVSYLQGFLFAKPMPLKEFL 500 >UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magnetospirillum RepID=A4U4R0_9PROT Length = 840 Score = 406 bits (1045), Expect = e-112, Method: Composition-based stats. Identities = 94/350 (26%), Positives = 158/350 (45%), Gaps = 11/350 (3%) Query: 178 RQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVW 237 E + + S + ++ + + ++ DD ++V Sbjct: 489 GDEFAVVLTNLDDPEGASNVAESIIASISEPFGLDEHEVNTSTSIGITIFPDDAVDSEVL 548 Query: 238 YAFLLGGMS---GTVVGLLCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQ 288 M +Y+ + R ++ A+ +Q + YQP+++ + Sbjct: 549 LKNADLAMFRSKAEGRNNYHFYVAEMDAEIQARKVVEHDLRVALGTDQLEMHYQPLIEMK 608 Query: 289 ALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPV 348 V G E L+RW+HP G + P FI AE +IVPL + + + + Sbjct: 609 TGEVVGCEALIRWKHPTRGWVSPVEFIPIAERTDLIVPLGRWILHRSCLQGRDWARAGLP 668 Query: 349 GVKFGINIAPDHLHSES-FKADIQKLLTSLPAHHFQIVLEITERDMLKEQEAT-QLFAWL 406 K +N++P + + A I +L Q+ LEITE ++ EAT + L Sbjct: 669 PQKIAVNLSPVQFKNHTALLAMIADILDQTGFPPDQLQLEITEGIAMQNVEATVDVLRQL 728 Query: 407 HSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRL 466 +GV I+IDDFGTG+S+L YL+RF +D LKIDR F+ IG + V++A++TL L Sbjct: 729 RDMGVLISIDDFGTGYSSLNYLKRFPVDKLKIDRSFVVDIGLHPDNAAVVNAIVTLGHSL 788 Query: 467 NMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTP 516 EGVET EQ +L GV+ QG++ ++ LP D+F R++++ Sbjct: 789 GTRVNVEGVETIEQLDFLKAHGVDEAQGFYFAKALPPDEFARFVREKSPW 838 >UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W545_9CYAN Length = 709 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 94/340 (27%), Positives = 149/340 (43%), Gaps = 10/340 (2%) Query: 187 LIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDW-TWNDVWYAFLLGGM 245 + + L L + V + GI L+ Y D A Sbjct: 372 IKDATRVAERIQATLKAPFNLNNHEVFTSASIGIALSSTGYERSEDILRDADIAMYRAKE 431 Query: 246 SGTVVGLLCYYLMSVR----MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRW 301 G + +M R +R ++ A++R++F V YQP+ +TG E L+RW Sbjct: 432 LGKARHEIFDKIMHARALELLRLENDLRRALERQEFEVYYQPITSLVTGMLTGFEALVRW 491 Query: 302 RHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLP--VGVKFGINIAPD 359 RHP G + P FI AE +I+PL + + R P +K +N++ Sbjct: 492 RHPELGLVSPAEFIPVAEDTGLIIPLGEWVLHEACRQLRMWHTQFPTPEPLKMSVNLSGK 551 Query: 360 HLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDF 418 + I +L + LEITE +++ E T++ L + +++++DDF Sbjct: 552 QIKEPDLIEQIDHILAETGLDGSFLKLEITESILMENAETVTKMLLQLRARNIQLSVDDF 611 Query: 419 GTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETP 478 GTG+S+L YL RF ++ LKIDR F++ + + + ++ ++TLA L M +AEGVET Sbjct: 612 GTGYSSLSYLHRFPVNTLKIDRSFVSKMNPKNRNTEIIRTIITLAHSLRMDVIAEGVETL 671 Query: 479 EQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQW 518 EQ L QGY S+PL L PQW Sbjct: 672 EQLTELKLLNCEQGQGYLFSKPLTKCAAGLLL--GGIPQW 709 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 94/326 (28%), Positives = 149/326 (45%), Gaps = 11/326 (3%) Query: 199 SRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYL 257 R++N+ + + G + + LY D + M G Y Sbjct: 314 ERILNMIGQPYLIGTQECFVGASIGISLYPLDGDNVESLVKNADTAMYQAKDSGRNAYKF 373 Query: 258 MS--------VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEI 309 + RM R + AI++ QF + YQP V+ + R+ G+E LLRW HP G I Sbjct: 374 FTPAMGEEAFKRMEMERALRYAIEKNQFKLLYQPQVELSSGRILGVEALLRWTHPEWGPI 433 Query: 310 PPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPV-GVKFGINIAPDHLHSESFKA 368 P FI+ E+ +I+P+ + + + + + + P ++ +N A Sbjct: 434 SPSVFISLIENTNLILPIGEWVLDEACKQNKAWQALHPGFPLRMAVNFAARQFAQADLVE 493 Query: 369 DIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIY 427 + K L + LEITE + + E + L +GV IAIDDFGTG S+L Y Sbjct: 494 TVAKALQKSGLAAEFLELEITEGSAMNDIELNIRKMQALKELGVSIAIDDFGTGFSSLAY 553 Query: 428 LERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSER 487 L+RF +D LKID+ F++ I + ++ + +A L M +AEGVET Q +L Sbjct: 554 LKRFPIDILKIDKSFLDEIQHGKKDAAIVATISEMAHSLGMEVIAEGVETKYQLEFLRGH 613 Query: 488 GVNFMQGYWISRPLPLDDFVRWLKKP 513 G + +QGY SRP+P + L+K Sbjct: 614 GCDMIQGYLFSRPVPPEQIAEILQKG 639 >UniRef50_A8VRH4 Putative uncharacterized protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRH4_9BACI Length = 815 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 87/351 (24%), Positives = 157/351 (44%), Gaps = 11/351 (3%) Query: 162 FAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIP 221 F ++L+ TP + +++ + F + + ++ D + Sbjct: 472 FTIIHLDATPEESLQLGNKIASAISMAFDISGFDAFITVSIGISHHPDHGKDLNTLIKKS 531 Query: 222 LTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAY 281 N +++A +G + + L + ++ + A++R++F + Y Sbjct: 532 -----------DNAMYFAKKMGRNNVQMFNEEINTLSTKNLKLESLLYKALERDEFLLHY 580 Query: 282 QPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAE 341 QP D + R++G+E L+RW + G I P FI AE +IVP+ + + Sbjct: 581 QPQYDAKTNRISGVEALIRWDNEELGMISPADFIPLAEETGLIVPIGEWVMRTACHQNKA 640 Query: 342 LEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQ 401 + + +N++ + I K+L + LEITE + A Sbjct: 641 WQDEGLPPMVMSVNLSIRQFYQPDLPQVIGKILEESGMAPELLELEITESMAMHADSAIS 700 Query: 402 LFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLT 461 + L +GV IAIDDFGTG S+L +L++F LD+LKIDR F++ I + ++ ++ Sbjct: 701 ILKQLKQLGVRIAIDDFGTGFSSLNHLKKFPLDHLKIDRSFVDDICLGSEEQDIVKTIIM 760 Query: 462 LAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 LA LN+ VAEGVE Q ++L + + QG+ S+P+ D L+K Sbjct: 761 LAHNLNLRVVAEGVENDLQQQFLKDHRCDVFQGFHFSKPVIRDAIPELLRK 811 >UniRef50_A4XXL0 Diguanylate cyclase/phosphodiesterase n=26 Tax=cellular organisms RepID=A4XXL0_PSEMY Length = 711 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 96/375 (25%), Positives = 167/375 (44%), Gaps = 15/375 (4%) Query: 153 NPLLKNSGVFAALN-LNLTPSLFYSSRQEDYDGVALIIGNTALST----FSSRLMNVNEL 207 + + + A + L + + D AL+ + + +++ EL Sbjct: 324 SYQSGDQLLLALSDRLRSHSGRLGALARLGGDQFALVQADIEQPYEAAELAQSVLDDLEL 383 Query: 208 TDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS---GTVVGLLCYYL------M 258 + + + + L+ +D + M+ +Y+ M Sbjct: 384 PFLLDHQEVRLRATIGITLFPEDGDSTEKLLQKAEQTMTLAKSRSRNRYQFYIASVDSEM 443 Query: 259 SVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFA 318 R +++ A+ Q ++ YQP VD + RV G+E LLRW+HP G + PD FI A Sbjct: 444 RRRRELEKDLRDALALNQLHLVYQPQVDYRDHRVVGVEALLRWQHPQHGFVAPDLFIPLA 503 Query: 319 ESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLP 378 E I+P+ + + + R E ++ IN++ LH + L+ Sbjct: 504 EQNGTIIPIGEWILDQTCRQLREWHDQGFTDLRMAINLSTVQLHHAELPRVVNNLMQVYR 563 Query: 379 AHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLK 437 + LE+TE ++++ A Q L G IAIDDFGTG+S+L YL+ LD +K Sbjct: 564 LPPRSLELEVTETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKIK 623 Query: 438 IDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWI 497 ID+ F+ + + + ++ A++ L K L M +AEGVET EQ ++ +G + QGY Sbjct: 624 IDKSFVQDLLEDEDDATIVRAIIQLGKSLGMQVIAEGVETVEQEAYIIAQGCHEGQGYLY 683 Query: 498 SRPLPLDDFVRWLKK 512 S+PLP + +LK+ Sbjct: 684 SKPLPARELTLFLKQ 698 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 93/308 (30%), Positives = 150/308 (48%), Gaps = 11/308 (3%) Query: 214 ETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSG---TVVGLLCYYLMSV------RMRP 264 + + + L+ D T D M G +++ + R+ Sbjct: 779 HELAPSVSIGISLFPSDGTDVDTLLKHADTAMYGAKEVGRNNFQFFVPEMNTRALERLLL 838 Query: 265 GREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMI 324 + AI+R + + YQP V + R G E L+RW+HP G +PP FI AE +I Sbjct: 839 ENALRRAIERNELTLHYQPQVAATSDRPNGCEALVRWQHPDFGLVPPAQFIPIAEDSGLI 898 Query: 325 VPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQI 384 VPL + + R + + + G+NI+ F + ++L A+ +I Sbjct: 899 VPLGEWVLREACRQQVKWARSGL-HLMVGVNISALQFRRADFVDSVVQVLAETGANPERI 957 Query: 385 VLEITERDMLKEQEA-TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFI 443 LEITE ++ +A ++ L ++G+ +A+DDFGTG+S+L YL+R + LKIDR F+ Sbjct: 958 ELEITESALMDASDALSRRLRELANMGLSLALDDFGTGYSSLAYLKRLPIGRLKIDRSFV 1017 Query: 444 NAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPL 503 + + + V A L+LA+ L + VAEGVET Q +L RG + +QGY SRPL + Sbjct: 1018 KDLPGDPEDAAVTAATLSLARDLGLEVVAEGVETVAQRDFLVARGCHTLQGYLYSRPLDV 1077 Query: 504 DDFVRWLK 511 F W++ Sbjct: 1078 AAFEAWMQ 1085 >UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Comamonadaceae RepID=A1W8G6_ACISJ Length = 756 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 103/488 (21%), Positives = 180/488 (36%), Gaps = 38/488 (7%) Query: 30 LQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLD-TCQQANPELTARAA 88 LQ V E++ + ++ Y A + L +QA A Sbjct: 305 LQETVGNLHREIQDRQRDQERIYWMAHYDALTELPNRVLLAERGQDAIRQAQESGAPLAV 364 Query: 89 FSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIV 148 +++ F V D + + + + + + + +A L G V ++ Sbjct: 365 MFLDLDNFKHVNDS--LGHRIGDALLVEIAQRL-RTTVRQRDTVARLGGDEFV-----LL 416 Query: 149 IWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELT 208 + N L P +AL +G S + + Sbjct: 417 LPGANAQGAARVAAKMQEAALQPVHIQHHEL----SLALSMGIALFPEHGSDFETLIQSA 472 Query: 209 DMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREI 268 D + K G + R + ++ + Sbjct: 473 DTAMYRAKADGRN-SFRFFTPTMQAQSARA-----------------------LQLTNAL 508 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A++R Q + YQP V RV G+E LLRW HP G + P FI AE I+P+ Sbjct: 509 RRALERNQLSLHYQPQVSIATGRVCGVEALLRWHHPELGAVSPAEFIPVAEDTGQILPIG 568 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + + +N++ + +LL + LE+ Sbjct: 569 EWVLRTALAQLRTWHSQGLPALTMAVNLSAVQFRQPQLLELVDRLLAEYGVQPHLLELEL 628 Query: 389 TERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE + + A LH+ GV +++DDFGTG+S+L +L+RF + LKID+ F+ + Sbjct: 629 TENVAVADPHAAIATMDQLHAKGVRLSMDDFGTGYSSLSHLKRFQIYRLKIDQSFVRDLD 688 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + ++ A++ +A+ L M T AEGVET Q +L E+G + QG++ SRPL Sbjct: 689 HDGNDRAIVSAIIRMAQALGMRTTAEGVETAHQLTFLREQGCDEAQGFYFSRPLGAPHLQ 748 Query: 508 RWLKKPYT 515 ++L + Sbjct: 749 QYLLQRPA 756 >UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=B9M1S6_GEOSF Length = 749 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 94/354 (26%), Positives = 157/354 (44%), Gaps = 10/354 (2%) Query: 167 LNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRL 226 L + +L E L +S + L++ A + + Sbjct: 370 LRSSDTLARIGGDEFVVLFTLEGPQLNVSPLAQHLIDSITSVYPISGRDVYASTSIGIAT 429 Query: 227 YADDWTWNDVWYAFLLGGMSGTVVGL---LCYYL------MSVRMRPGREIMTAIKREQF 277 + DD + M G +Y RM + A++RE+F Sbjct: 430 FPDDGGDCNSLLRCADMAMYAAKEGGGKGYHFYSPEMNLKAHARMEMETNLRHALEREEF 489 Query: 278 YVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIAR 337 ++ +QP+V+ + R+ G E LLRW P G I PD FI AE IVPL + + R Sbjct: 490 FLEFQPIVNARDGRLVGAEALLRWSDPEKGLIMPDMFIQVAEESGFIVPLGEWVLRTACR 549 Query: 338 DAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQ 397 + + + +N++ +F + ++ + LE+TE ++ + Sbjct: 550 KMKDWREAGLPPFRISVNVSGRQFCQANFTDTVCSIIRETGMDPSFLALEMTETSLMVDV 609 Query: 398 EATQL-FAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVL 456 EAT L + + I IDDFG G+S+L YL++F +D +KIDR FI + + ++ Sbjct: 610 EATAKALMQLKELDISIVIDDFGAGYSSLGYLQKFPIDRIKIDRSFIRDLSSHANDKAIV 669 Query: 457 DAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 +A++ +A RL + VAEGVET EQ +L E+G + +QG++ RPL + F L Sbjct: 670 EAIIAMAARLKLQVVAEGVETSEQLDFLKEQGCHEIQGFYFHRPLSEELFKTLL 723 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 95/354 (26%), Positives = 162/354 (45%), Gaps = 14/354 (3%) Query: 174 FYSSRQEDYDGVALIIGN----TALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYAD 229 + D +++G+ + ++ E + + A + V +Y Sbjct: 466 TDVVARYGGDEFTIVLGDLSHVDNIPAILHKVRAAFETPLVISGQEVYASFSVGVSVYPH 525 Query: 230 DW-----TWNDVWYAFLLGGMSGTVVGLLCYYLMSVR----MRPGREIMTAIKREQFYVA 280 D + A SG M+ R + ++ A+ R +F + Sbjct: 526 DGDDGATLLKNADTAMYRSKASGRNRYQFYAPEMNARGQELLSLETDLRRALDRGEFRLH 585 Query: 281 YQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAA 340 YQP +D + R+ G+E LLRW+HP G I P F+ E +IVP+ + + Sbjct: 586 YQPQLDLRDNRIAGVEALLRWKHPRDGVIAPGDFVPLLEDTGLIVPVGEWVLRNACTQYR 645 Query: 341 ELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEAT 400 + V+ +N++ ++ ++++L + LEITE +++ AT Sbjct: 646 ACRESGVAPVRISVNVSARQFREDTLLRQVEQVLREECMPPHHLELEITESTAMQDVAAT 705 Query: 401 -QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAV 459 + A L ++GV +AIDDFGTG+S+L YL+RF LD LKID+ FI + + + +A Sbjct: 706 GDILAALDALGVRLAIDDFGTGYSSLAYLKRFPLDALKIDQAFIRDAPRDANIAAIAEAS 765 Query: 460 LTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKP 513 ++L +L + VAEGVET EQ +L R + +QG+ SRPLP D +L + Sbjct: 766 ISLGHKLGLEVVAEGVETAEQLAFLRRRACDLIQGFHFSRPLPADALTPFLARH 819 >UniRef50_B8HRI7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HRI7_CYAP4 Length = 744 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 102/324 (31%), Positives = 151/324 (46%), Gaps = 12/324 (3%) Query: 201 LMNVNELTDMPVRETKIAGIPLTVRLY-ADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMS 259 L L + T GI L Y + D A G ++ M Sbjct: 388 LSAPFTLKQHELFTTASIGIALGTSYYEQPEAILRDADIAMYQAKTQGKARHIIFDQAMH 447 Query: 260 VRM----RPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFI 315 R + ++ AI+R +F + YQP+V Q R+ G E L+RW HP G I P FI Sbjct: 448 TRAVKRWQLESDLRWAIERREFCLVYQPIVSIQTERLIGFEALVRWHHPQRGWISPAEFI 507 Query: 316 NFAESQKMIVPLTQHLFELIARDAAELEKVLP------VGVKFGINIAPDHLHSESFKAD 369 + AE +I+PL + R + + + +N++ Sbjct: 508 SVAEETGLIIPLGHWVLWEGCRQLRQWQSQFNLSPTAEPPLTVSVNLSSKQFCQPDLIHY 567 Query: 370 IQKLLTSLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYL 428 IQ++L + LE+TE +++ AT L L +G+++A+DDFGTG+S+L YL Sbjct: 568 IQQVLQQTGMEGTCLKLELTESILMENLSTATSLLVQLKELGIQLALDDFGTGYSSLSYL 627 Query: 429 ERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERG 488 RF LD LKIDR FIN I ET ++ +L+LA+ LN+ VAEGVET Q L Sbjct: 628 HRFPLDVLKIDRSFINGIEAETENLEIVRTILSLARSLNLQVVAEGVETQAQLDHLQALQ 687 Query: 489 VNFMQGYWISRPLPLDDFVRWLKK 512 + QGY ISRPL + ++L++ Sbjct: 688 CGYAQGYLISRPLTPEKTEQFLQE 711 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 89/259 (34%), Positives = 144/259 (55%), Gaps = 3/259 (1%) Query: 256 YLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFI 315 +++ R ++ TA+ REQF + YQP +D + VTG+E L+RW HP G + P FI Sbjct: 1237 AVVTARAELENDLRTALAREQFMLHYQPQID-RRGSVTGVEALVRWPHPQRGMVSPGEFI 1295 Query: 316 NFAESQKMIVPLTQHLFELIARDAAELEKVLPVG-VKFGINIAPDHLHSESFKADIQKLL 374 AE +++PL + + A + V G + +N++ H E+F D+ + + Sbjct: 1296 PLAEETGLVLPLGRWVLHTACAQLARWQHVPGRGHLSMAVNVSSRQFHHEAFVEDVVRAI 1355 Query: 375 TSLPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTL 433 T+ A ++ LE+TE +++ E T A L S GV ++DDFGTG+S+L YL+R L Sbjct: 1356 TATGAPASRLKLELTESLFVEDMETTIATMAALRSHGVGFSLDDFGTGYSSLSYLKRMPL 1415 Query: 434 DYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQ 493 D LKID+ F+ + + + ++D ++ L++ L + +AEGVET EQ L + G Q Sbjct: 1416 DQLKIDQSFVRDLLADPNDAAIVDTIIALSRSLGLDVIAEGVETAEQRTRLEQAGCRAYQ 1475 Query: 494 GYWISRPLPLDDFVRWLKK 512 GY+ SRPLP +L + Sbjct: 1476 GYFFSRPLPETALEDFLVQ 1494 >UniRef50_B5ED91 Diguanylate cyclase/phosphodiesterase n=3 Tax=Geobacter RepID=B5ED91_GEOBB Length = 742 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 97/330 (29%), Positives = 164/330 (49%), Gaps = 10/330 (3%) Query: 191 NTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS---G 247 + S + L+N G+ + + ++ DD + M Sbjct: 392 DENASAIAKNLINAITPVYQVCDREVYVGVSVGISIFPDDGDVPETLLKNADIAMYNAKS 451 Query: 248 TVVGLLCYY------LMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRW 301 G C+Y + RM+ ++ A++RE+F++ YQP++D++ R+T +E LLRW Sbjct: 452 QGQGGFCFYSAQLNERLHERMQLEFKLRGAVEREEFFLEYQPILDSKTGRITAVEALLRW 511 Query: 302 RHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHL 361 P G + PD+FI AE +I+PL + + + + + V+ +NI+ Sbjct: 512 NDPEKGRVMPDSFIPLAEDTGVILPLGEWVLRTACAKLRQWQDAGVMPVRMAVNISGRQF 571 Query: 362 HSESFKADIQKLLTSLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGT 420 ++ L H + LE+TE ++K +E + L + V I+IDDFGT Sbjct: 572 TQGDLSKTVEDALLQSGVHPSWLELELTETCLIKNVEETVRKLCRLKGLCVSISIDDFGT 631 Query: 421 GHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQ 480 G+S+L YL+ F +D+LKIDRGFIN + ++DA++ +AK +++ +AEGVET +Q Sbjct: 632 GYSSLQYLKNFPIDHLKIDRGFINNVCELPDDRAIVDAIIGIAKAMDLHVIAEGVETRQQ 691 Query: 481 ARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 A L RG + QGY+ RPLP + + L Sbjct: 692 AEHLMRRGCDEFQGYYFYRPLPEEKLLEVL 721 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 83/252 (32%), Positives = 131/252 (51%), Gaps = 1/252 (0%) Query: 260 VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAE 319 R + A++R++F + YQP ++ + +TG+E L+RWRHP G +PP +FI AE Sbjct: 505 QRQSLESSLRLALERQEFLLHYQPKMNLETGHITGMEALIRWRHPELGLVPPASFIGVAE 564 Query: 320 SQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPA 379 ++ P+ + + + R E V +N++ + F + L Sbjct: 565 DCGLMQPIGRWVLQEACRQVKEWMVAGLNPVPVAVNVSAVEFRRKHFFDGVISTLRETDL 624 Query: 380 HHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKI 438 + LE+TE ++KE E + L S GV++AIDDFGTG+S+L YL R +D LKI Sbjct: 625 DPRYLELELTETVLMKEAEPTIAVLHALKSAGVKLAIDDFGTGYSSLSYLTRLPVDTLKI 684 Query: 439 DRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWIS 498 DR F+ + T T + ++ A++ + K LN+ +AEGVET EQ L QGY+ S Sbjct: 685 DRSFVTDVTTRTDNAAIVSAIIGMGKSLNLNVIAEGVETQEQLALLRSHCCAEGQGYYFS 744 Query: 499 RPLPLDDFVRWL 510 RP+ + L Sbjct: 745 RPVSVPAVAELL 756 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 83/331 (25%), Positives = 148/331 (44%), Gaps = 10/331 (3%) Query: 196 TFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGL 252 T + N+ + + + L+ DD + M Sbjct: 535 TVAESFRNLLAMPFFLGGREIFITASMGISLFPDDGDTMEALIKKADTAMYHIKESGRNS 594 Query: 253 LCYYL------MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVA 306 ++ ++ R+ + A+++ + + YQP ++ V G+E L+RW P Sbjct: 595 FQFFAEEMNQKVNARLTIETGLRRALEKGEMLLHYQPRLEPGTGAVVGMEALVRWNSPDM 654 Query: 307 GEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESF 366 G I P FI AE +IV + + A E ++ ++ +NI+ F Sbjct: 655 GLISPADFIPIAEDSGLIVEIGDWVLATACCQALEWHRMGHDSLRVSVNISARQFVGHDF 714 Query: 367 KADIQKLLTSLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSAL 425 + +++ + LE+TE + E ++ L G+ I+IDDFGTG+S+L Sbjct: 715 VDRVVRIIEQSGLSPHFVELELTETALTHNVDETVKIMNRLRERGITISIDDFGTGYSSL 774 Query: 426 IYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLS 485 YL+RF +D LKID+ FI+ + + ++ ++ +A ++M VAEGVET EQ + L Sbjct: 775 NYLKRFPVDVLKIDKSFIDDMVKRREDAAIVATIIGIAHHMHMKVVAEGVETAEQMKLLM 834 Query: 486 ERGVNFMQGYWISRPLPLDDFVRWLKKPYTP 516 E +QG++ SRPLP ++F R++ P Sbjct: 835 EGNCEEIQGFYFSRPLPPEEFERYIAGRTVP 865 >UniRef50_A4U1P1 Sensory box/GGDEF family protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U1P1_9PROT Length = 768 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 96/354 (27%), Positives = 164/354 (46%), Gaps = 10/354 (2%) Query: 170 TPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYAD 229 SL E + G ++ + L G + + LY D Sbjct: 413 IESLARVGGDEFGFLLLTTDGGESVVELAGSLTKAMRRPFDINGHDVQVGAAIGITLYPD 472 Query: 230 DWTWNDVWYAFLLGGMS---------GTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVA 280 D D M +++R R ++ AI+R++ + Sbjct: 473 DGADADTLLKNADMAMYRAIEDNPNGYRFFAPTMDAELALRRRLESDLRKAIQRDELELH 532 Query: 281 YQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAA 340 YQP+VDTQ+ R+ E LLRW H G I P FI AE MI P+ + + + Sbjct: 533 YQPIVDTQSRRIISFEALLRWNHADDGWISPVEFIPMAEGNGMIGPIGEWVLRRACQQMR 592 Query: 341 ELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEAT 400 + +++ V +N++ L + ++K+LT ++ LE+TE ++++ +A Sbjct: 593 DWDRMGIPPVPVAVNMSALQLKRQDVPMLVRKMLTEAGVPSHRLELELTETTVMEDADAA 652 Query: 401 Q-LFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAV 459 Q +FA + +GV +A+DDFGTG+S+L L+RF + LKIDR F+ + + + + A+ Sbjct: 653 QRIFADIAGLGVRLAVDDFGTGYSSLARLKRFPVGKLKIDRSFVGDLAEDEGDAAIARAI 712 Query: 460 LTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKP 513 +++ + + VAEGVETPEQ L+E G + +QG+ SR +P D L++ Sbjct: 713 ISMGHAMGLKVVAEGVETPEQLAILAEAGCDAIQGFLFSRAVPADQAAELLRRG 766 >UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5X9_9PROT Length = 927 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 93/329 (28%), Positives = 153/329 (46%), Gaps = 11/329 (3%) Query: 192 TALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVG 251 ++ + ++ E + + LY +D T DV + M Sbjct: 596 ASIDRVAQDILGSLAEPFKLDAEPAYISASIGISLYPNDATELDVLFKHADQAMYVAKYA 655 Query: 252 L---LCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWR 302 Y+ + RM ++ A+ QF V YQP+V+ + ++ E L+RW+ Sbjct: 656 GRNRFNYFTKDMQEAAQARMHLANDLRIAVAAGQFRVYYQPIVEMSSGQIYKAEALIRWQ 715 Query: 303 HPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLH 362 HPV G + P FI AE +IVP+ + +F + + + + +N +P Sbjct: 716 HPVRGMVSPAEFIPLAEETGLIVPIGEWVFRQAVQQVVQWRRKFHRSFQISVNKSPVQFR 775 Query: 363 SESFKADIQKLLTSLPAHHFQIVLEITERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTG 421 + + L I++EITE +L E E + G+++AIDDFGTG Sbjct: 776 HAESLS-WPEYLEQQHVSGDSIIVEITEGLLLDAEVEVNKKLLRFRDAGIQVAIDDFGTG 834 Query: 422 HSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQA 481 +S+L YL+ F +DYLKID+ F+ +G T + +A++ +A +L +AEGVET Q Sbjct: 835 YSSLSYLKEFDIDYLKIDQSFVRNLGPGTSDLALCEAIIVMAHKLGFKVIAEGVETSTQH 894 Query: 482 RWLSERGVNFMQGYWISRPLPLDDFVRWL 510 L+ G ++ QGY SRPLP ++F R L Sbjct: 895 ELLAAAGCDYGQGYLYSRPLPPEEFERQL 923 >UniRef50_Q47HF3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q47HF3_DECAR Length = 994 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 80/345 (23%), Positives = 150/345 (43%), Gaps = 10/345 (2%) Query: 176 SSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWND 235 + E +A + + R+++ + ++ + + ++ + + Sbjct: 499 RAGNEFGFVMANLSHERDALALAQRMLDAISVPFSVAGQSVAITASIGISVFPKNGENGE 558 Query: 236 VWYAFLLGGMSGTVVG---LLCYYL------MSVRMRPGREIMTAIKREQFYVAYQPVVD 286 + +Y + R+ + A+ R++F V YQP V Sbjct: 559 AMLRSADAALLRAKQSGRNTFSFYSPEMDADAARRLSIESALRDALARDEFCVHYQPQVS 618 Query: 287 TQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVL 346 + + G+E LLRW + G I P FI AE +I+ + + + Sbjct: 619 LDSGHMIGMEALLRWNSALLGPISPVEFIPIAEETGLIMQIGDWVLRTACHQTKAWLDLG 678 Query: 347 PVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKE-QEATQLFAW 405 + + +N++P A + L + LEITE + + +A + + Sbjct: 679 LLPLHVAVNLSPRQFRQADLPAQVAHALAESGLPAGALELEITESAFIDDIDDAVAMCSK 738 Query: 406 LHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKR 465 L S+G+++++DDFGTG+S+L Y+ RF D +KID+ F+ I + + + A + + + Sbjct: 739 LKSLGIKLSLDDFGTGYSSLAYVSRFPFDKIKIDQSFVRDIVNNPVNAAIASAAIVMGRS 798 Query: 466 LNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 LN+ +AEGVET QA +L R + +QGY SRPLP ++F L Sbjct: 799 LNLSVLAEGVETEAQAAFLRSRRCDAIQGYLFSRPLPPEEFAPLL 843 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 92/345 (26%), Positives = 154/345 (44%), Gaps = 14/345 (4%) Query: 175 YSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWN 234 ++ E A I+ L+T + + I P R + Sbjct: 647 LGTQPEAATRKAQIVAEKVLATLRE---PYDLAGYQHYSTSSIGVTPFNARQGSVSELLK 703 Query: 235 DVWYAFLLGGMSGTVVGLLCYYLMSVRMR------PGREIMTAIKREQFYVAYQPVVDTQ 288 A G +C++ ++ ++ ++ QF V YQP VD + Sbjct: 704 QADLAMYQAKTMGR--NTVCFFDPDMQASVSANAALSTDLRAGLREHQFLVHYQPQVD-R 760 Query: 289 ALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKV-LP 347 R+TG+E LLRW+HP G + P FI AE +I+PL Q + E A +K Sbjct: 761 EQRITGVEALLRWKHPQRGMVSPAEFIPVAEETGLILPLGQWVLEQACLQLAVWQKRPET 820 Query: 348 VGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWL 406 G+ +N++ F + + + LE+TE + E A L Sbjct: 821 AGLSIAVNVSVRQFRHPDFVDMVMAAIKHTGIQPHNLKLELTESLLADRMEIAIAKMGTL 880 Query: 407 HSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRL 466 ++GV +A+DDFG G+S+L YL+R LD LKID+ FI + ++ + + A+++LA+ L Sbjct: 881 KALGVTLALDDFGMGYSSLSYLKRLPLDQLKIDKSFIADVFSDPNDAAICSAIISLAQSL 940 Query: 467 NMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 + +AEGVET Q +L+ G + QG+ PLP+ +F +++ Sbjct: 941 GLDVIAEGVETEAQRSFLAGLGCGYYQGFLFCPPLPIAEFEAFMQ 985 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 89/312 (28%), Positives = 150/312 (48%), Gaps = 15/312 (4%) Query: 221 PLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMSV--------RMRPGREIMTA 271 + + +Y +D T + M +G Y L + R+ + A Sbjct: 565 SIGIAVYPEDGTTVEALIKNADTAMYRAKDLGRNSYQLYTAAMNARSFERLTMESSLRHA 624 Query: 272 IKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHL 331 + RE+F + YQ VD++ R++G+E L+RW HP G + P FI AE+ +I + + + Sbjct: 625 LTREEFRLVYQVKVDSEDGRMSGVEALVRWHHPEMGLVSPVDFIPLAEAMGVISDIGEWV 684 Query: 332 FELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITER 391 R + V+ +N++ + + L + LE+TE Sbjct: 685 LRTACRQCKHWMDLGLPPVRIAVNVSAQQFVETDVPEVVARALRETGLPPQYLELELTET 744 Query: 392 DMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTE- 449 +++ E + L ++GV I+IDDFGTG+S+L YL+R +D LK+DR F+N I Sbjct: 745 VLMQRVDEVVAVLKSLRAMGVRISIDDFGTGYSSLSYLKRMPIDALKVDRSFVNDIFDGQ 804 Query: 450 ----TITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 + ++ ++ LA L + +AEGVETPEQA +L +G + +QGY ISRP+ +D Sbjct: 805 SKVTEDGAEIVSTIINLAHNLKLKAIAEGVETPEQAEFLRSKGCDEVQGYLISRPVSGED 864 Query: 506 FVRWLKKPYTPQ 517 + + PQ Sbjct: 865 LISLFDRNLLPQ 876 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 89/334 (26%), Positives = 143/334 (42%), Gaps = 25/334 (7%) Query: 179 QEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWY 238 L +G + + D + K +G Y Sbjct: 669 DPYELSTTLSVGIAMCPADGESFDTLYQRADAAMYSAKQSGR---------------NRY 713 Query: 239 AFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVL 298 F + + ++ + A++R+QF + YQP V +V G E L Sbjct: 714 GFFTADLQAR---------TARALQIENALRRALERQQFELHYQPQVSLGTGQVVGAEAL 764 Query: 299 LRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAP 358 LRW HP G + P FI AE+ IV L + + ARDA + +N++ Sbjct: 765 LRWHHPELGVVAPAEFIPVAENSGQIVALGEWVLHTAARDAKRWLDMQLPLRAVSVNLSA 824 Query: 359 DHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDD 417 + + L ++ LE+TE + + A + LH GV +++DD Sbjct: 825 VQFRHPQLPEMVTRCLQQAGLPARRLELELTEGAAVDDPVAALAMMDQLHDRGVRLSMDD 884 Query: 418 FGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVET 477 FGTG+S+L L+RF + LKID+ F+ + + ++ A++ +A+ L M T AEGVET Sbjct: 885 FGTGYSSLSCLKRFQIYKLKIDQSFVRDLDDDANDRAIVSAIIRMAQALGMQTTAEGVET 944 Query: 478 PEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 Q ++L +G + QGY SRPLP D F +L+ Sbjct: 945 DGQLQFLRAQGCDEGQGYLFSRPLPADAFEAYLR 978 >UniRef50_Q3MFD3 Diguanylate cyclase/phosphodiesterase n=4 Tax=Nostocaceae RepID=Q3MFD3_ANAVT Length = 576 Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 75/257 (29%), Positives = 137/257 (53%), Gaps = 1/257 (0%) Query: 256 YLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFI 315 + R+ E+ A++R + V YQP++D Q ++T +E L+RW+HP G + P FI Sbjct: 302 AQLQERLALENELHGALQRNEIVVYYQPIIDLQTQQITAVEALVRWQHPTRGLVSPAKFI 361 Query: 316 NFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLT 375 AE+ +IV + + + + ++ +N++ + + +++ Sbjct: 362 PIAEANGLIVEIGEWVLRTACLQNRAWQLAGLPPIRMSVNLSARQFEESNLVELVGEIIQ 421 Query: 376 SLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLD 434 H + LE+TE ++ + Q + + L +GV +A+DDFGTG+S+L YL+RF ++ Sbjct: 422 ESGLHPSYLELEVTESSLMADIQRSVTILKQLRELGVWLALDDFGTGYSSLNYLKRFPVN 481 Query: 435 YLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQG 494 LKIDR F+ + + ++ V +A++ LAK L + AEG+ET +Q +L +RG QG Sbjct: 482 MLKIDRSFVQDVCSNPDSAAVTNAIIALAKSLQLKITAEGIETQQQLSYLQKRGCQEGQG 541 Query: 495 YWISRPLPLDDFVRWLK 511 Y+ P P ++ L+ Sbjct: 542 YYFGIPAPANEITEILQ 558 >UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSM4_THISH Length = 648 Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 89/253 (35%), Positives = 138/253 (54%), Gaps = 1/253 (0%) Query: 260 VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAE 319 ++ +++ A+ RE+F V YQP VD + +V G E L+RWRHP G PP FI AE Sbjct: 394 RQLILENQLVKALAREEFEVHYQPQVDVISGQVVGAEALVRWRHPEKGLQPPANFIAIAE 453 Query: 320 SQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPA 379 +I L + + + +D +L + + IN++ + + S Sbjct: 454 ETGIIEGLGAWVLQKVCQDIRQLTRDGYRIPRISINLSARQFRQSDLVEQCRNTIRSAGI 513 Query: 380 HHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKI 438 I LE+TE ++K+ + A + L+++GV +AIDDFGTG+S+L L+ F +D LKI Sbjct: 514 APAYIELELTESTIMKDIDIAVGMLRQLNALGVRLAIDDFGTGYSSLNNLKHFPIDTLKI 573 Query: 439 DRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWIS 498 D+ F+ I + ++ A++ LAK L + VAEGVET EQ +L G +QGY+ S Sbjct: 574 DKSFVRDIPGDRDDEAIVTAIVALAKSLELEVVAEGVETREQLGFLKRLGCEIVQGYFFS 633 Query: 499 RPLPLDDFVRWLK 511 RPLP + F +LK Sbjct: 634 RPLPFEGFREYLK 646 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 88/301 (29%), Positives = 151/301 (50%), Gaps = 10/301 (3%) Query: 221 PLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMS--------VRMRPGREIMTA 271 + + +Y D + D+ M G Y S R+ + A Sbjct: 365 SIGIAIYPTDGSSADILLKNADMAMHKAKEFGGDGYQFYSSELNHRAMERLTLETSLRRA 424 Query: 272 IKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHL 331 ++R +F + YQP++ + R+ G+E LLRW P G + P FI AE +IVP+ + + Sbjct: 425 LERREFLLHYQPLLGIGSGRIVGVEALLRWDSPELGMVSPARFIPLAEETGLIVPIGEWV 484 Query: 332 FELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITER 391 L ++ + +N++ + F A + +L ++ + LE+TE Sbjct: 485 LRSACEQLRALHELGYTELCVSVNVSARQFRHDGFCAMVAAVLAAVGLDPRYLELELTES 544 Query: 392 DMLKEQEATQ-LFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTET 450 +++ E + + L +GV +AIDDFGTG+S+L YL+ F +D LKIDR F+ + + Sbjct: 545 VIMERSETAKGILRKLKQMGVSLAIDDFGTGYSSLSYLKHFPIDRLKIDRTFVKEVTVDQ 604 Query: 451 ITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 + + +A++ LA LN+ VAEGVET EQ +L+ + +QGY I+RPLP + + +L Sbjct: 605 DNAAIAEAIVALAHVLNLDVVAEGVETAEQLAFLAALRCDVVQGYHIARPLPPRNLLEFL 664 Query: 511 K 511 + Sbjct: 665 E 665 >UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2C0_METRJ Length = 703 Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 89/258 (34%), Positives = 136/258 (52%), Gaps = 5/258 (1%) Query: 259 SVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFA 318 + R R++ AI+ ++ + YQP V T R+ G E L+RW HP G +PP+AFI A Sbjct: 438 AARRDLERDLRQAIEGDELILYYQPQVSTGTGRLLGFEALVRWEHPTRGLVPPNAFIPLA 497 Query: 319 ESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLP 378 E +I+PL + + R+AA +K +N++P + +LT Sbjct: 498 EESGLILPLGEWVLRAACREAARWAH----PLKVAVNLSPRQFQQADLPERVLAILTETG 553 Query: 379 AHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLK 437 ++ LEITE ++ + A + L + GV IA+DDFGTG+S+L L+ F D +K Sbjct: 554 LAPTRLELEITETLIINDMARALGILRRLKAFGVSIAMDDFGTGYSSLATLQAFPFDKIK 613 Query: 438 IDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWI 497 IDR F+ + + ++ AVL L + L M VAEGVET Q R+L+ + QGY I Sbjct: 614 IDRSFVGHVEVSPQAAVIVRAVLGLGRSLGMSVVAEGVETDAQMRFLAAEACDEAQGYLI 673 Query: 498 SRPLPLDDFVRWLKKPYT 515 S+P P++ F + P T Sbjct: 674 SKPQPIERFAEQIDAPET 691 >UniRef50_C5RNC8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Clostridium cellulovorans 743B RepID=C5RNC8_CLOCL Length = 584 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 83/254 (32%), Positives = 143/254 (56%), Gaps = 1/254 (0%) Query: 258 MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 ++ R ++MTAI++ QF++ YQP V ++ G+E L+RW HP G I P FI Sbjct: 327 VNRRTILENDLMTAIEKGQFFLVYQPQVSLNTGKMVGVEALIRWSHPKLGLISPFEFIPI 386 Query: 318 AESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSL 377 E +I + + + A E K +NI+ L + I+ +L L Sbjct: 387 VEESGLIDSIGEWVIRTSCIQAKEWRDKKLPFFKVAVNISSIQLKKMNICKIIKDILKEL 446 Query: 378 PAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYL 436 + +E+TE M+++ E A + F L+++G++IAIDDFGTG+S+L YL +F++D L Sbjct: 447 SLDPNVLEVELTESAMMEDIELAIENFRELNNMGIKIAIDDFGTGYSSLNYLRKFSIDKL 506 Query: 437 KIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYW 496 KIDR F+ +G + ++ + ++ +AK L+ +AEGVET E ++L E G + +QGY+ Sbjct: 507 KIDRSFVTELGDDFESTIITKTIIDMAKNLSFKVIAEGVETKEHLKYLMENGCDEVQGYY 566 Query: 497 ISRPLPLDDFVRWL 510 S+P+ ++ ++ Sbjct: 567 FSKPITAEEVEEFV 580 >UniRef50_B8GNC0 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GNC0_THISH Length = 655 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 93/335 (27%), Positives = 151/335 (45%), Gaps = 11/335 (3%) Query: 188 IIGNTALSTFSSRLMN-VNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS 246 + LS + ++ + E + + G + + LY D + M Sbjct: 310 VDDPQGLSLLAEGILAELAEPYRLSNGQEVFVGGSIGISLYPQDGRSAEQLIMKADTAMY 369 Query: 247 GTV---VGLLCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEV 297 +Y ++ R+ + A++RE+F + YQP V TQ + G+E Sbjct: 370 QAKDQGRSNYQFYTSALTLAANDRLALETSLRHALEREEFTLHYQPRVRTQDDVMIGMEA 429 Query: 298 LLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIA 357 L+RW HP G PDAFI AE +I PL + R A ++ + +N++ Sbjct: 430 LVRWHHPDKGLTAPDAFIPMAEETGLITPLGLWVLRTACRQAQTWMRLYGEPIHMAVNLS 489 Query: 358 PDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLK-EQEATQLFAWLHSVGVEIAID 416 L + I +L + LE+TE ++ + A L ++GV +AID Sbjct: 490 MRQLRQPDLVSQIDAILRDTGLPASSLELELTESVLMAGDGHTLTALAELKALGVRLAID 549 Query: 417 DFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVE 476 DFGTG+S+L YL+R +D LKIDR F++ I + + ++ +A+ L + VAEGVE Sbjct: 550 DFGTGYSSLAYLKRLPIDALKIDRSFVSDIPHDASDMAIASTIIAMARTLGLEVVAEGVE 609 Query: 477 TPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 TPEQ +L + G + QG+ S P+ WL Sbjct: 610 TPEQLAFLKKEGCDSYQGFGFSPPVDAQAMTLWLD 644 >UniRef50_A1K5F7 EAL/GGDEF-domain containing signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5F7_AZOSB Length = 576 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 113/494 (22%), Positives = 188/494 (38%), Gaps = 24/494 (4%) Query: 28 SCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARA 87 S L H E+ ++ + + +D + K DRL P+ + RA Sbjct: 87 SGLDLPFIIHSGEISDRQAVSAMYEGVDDFI--AKGDYDRLLPVIER---ELRGLHARRA 141 Query: 88 AFSMNVRTFVLVK--------DKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTP 139 + R LV + FC+ G+ + +VD + Sbjct: 142 VRQADERIRELVNFDVLSALPNHNLFCT-KVGDWIADAGAQAAGAVLVVDVDRFMRINAS 200 Query: 140 MVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSS 199 + +++ L + L F + I L Sbjct: 201 FGYDTGNVILRQLGERLAAGLAADVMLARLGSDRFGVFLPGVVEREQAEIAARWLLRAFE 260 Query: 200 RLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCY---- 255 + N D+ + T GI + AD + A + G+ CY Sbjct: 261 QPFMKN---DIELFLTASVGIAMVGGDGADVFELLMNAEAAVARVKCQGGNGVRCYDRAM 317 Query: 256 -YLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAF 314 + R+ E+ A++R + + YQP+VD V E L+RW+HP G + PD F Sbjct: 318 NAASAERLTLEAELRHAVERGELRLFYQPIVD-PDGTVRAAEALVRWQHPEQGLLAPDRF 376 Query: 315 INFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLL 374 I A+ +I + + + +N++ +++ L Sbjct: 377 IPLADETGLITEIGAWVLTEACYQGRCWHDAGHERFRVSVNVSAVQFGQPRLLETVREAL 436 Query: 375 TSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTL 433 + LEITE ++ + E A + L ++GV IA+DDFGTG+S+L YL R + Sbjct: 437 RGSGFPPACLTLEITESSLMSDVESAAGMLRSLKNMGVRIAVDDFGTGYSSLSYLRRLPI 496 Query: 434 DYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQ 493 D +KID+ F+ + + ++ A++ LA L + TVAEGVET EQ L G + Q Sbjct: 497 DTVKIDKSFVRDVSNNGEDAAIVRAIIALAHSLGLGTVAEGVETAEQEATLRREGCDSFQ 556 Query: 494 GYWISRPLPLDDFV 507 GY RP+P + FV Sbjct: 557 GYRYGRPVPAEVFV 570 >UniRef50_B5XY29 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=12 Tax=Enterobacteriaceae RepID=B5XY29_KLEP3 Length = 511 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 119/509 (23%), Positives = 219/509 (43%), Gaps = 20/509 (3%) Query: 9 GRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRL 68 R+ +++ + + WH + + K + + + T Sbjct: 5 KRRNAWIAFSLALVVFLAGVFVINWQLWHSDQATHVAAARQAAKKIAAILDEAHAATATA 64 Query: 69 QPLTLDTCQ-QANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDIN 127 ++ C Q +L AA ++RT +L+KD + +CSS G + L+ + Sbjct: 65 LNVSRSGCSGQGQFQLGTEAALQPHLRTILLIKDGQVWCSSLPGNRVLTLH-----PESL 119 Query: 128 KNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVAL 187 + + +LP MV +P ++ R+ ++ + + +++L +L+ ED G+AL Sbjct: 120 PDEKLQLLPARMMVNKRPVLIYHTRSAQVRV--IVSISDIHLRDALY---SDEDNAGLAL 174 Query: 188 IIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSG 247 + + ++ + P + + + G + Sbjct: 175 SVNHQMIARYGDVGPLKASPHQDIF---SSPDYPFRIIYPESPFFSPSRLFQNGFGLLIF 231 Query: 248 TVVGLLCYYLMSVRM-----RPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWR 302 L +Y + + + AI + YQPVV+ + + G+E+L RW+ Sbjct: 232 IFSVSLLFYFLLRKYLNVYTSEEENLRYAIAQGYIVPFYQPVVNGKTGEIYGVEILARWK 291 Query: 303 HPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLH 362 + P FI AE +I+PLT+ L +A + LP G G+NI+ H++ Sbjct: 292 NATTQRRSPAEFIPLAERTGLIIPLTRSLMAQVAAQMNPIFSKLPDGFHIGLNISVSHIN 351 Query: 363 SESFKADIQKLLTSLPAHHFQIVLEITERD-MLKEQEATQLFAWLHSVGVEIAIDDFGTG 421 + SF D +++LEITE++ +L LHS G IA+DDFGTG Sbjct: 352 APSFIDDCLHYQRGFEGKAVKLMLEITEQEPLLLNDAVVDKLNTLHSRGFSIALDDFGTG 411 Query: 422 HSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQA 481 +S L L DY+KID+ F+ + E +S +LD V+ +A+ L++ +AEGVET Q Sbjct: 412 YSGLSCLHELVFDYIKIDQSFVGRVTGEAPSSKLLDCVIEMARTLSLRIIAEGVETQVQL 471 Query: 482 RWLSERGVNFMQGYWISRPLPLDDFVRWL 510 +L+ + ++ +QGY+ +P+P V L Sbjct: 472 EYLNRQNIHLLQGYYFWKPMPYVALVMLL 500 >UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQL8_BACS4 Length = 1016 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 81/329 (24%), Positives = 149/329 (45%), Gaps = 10/329 (3%) Query: 194 LSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYAD-----DWTWNDVWYAFLLGGMSGT 248 L ++ ++ + + + + +Y D D + A +G Sbjct: 688 LQASANLIIEKFKEPFFIQNQDVFTSASIGISVYPDHGRDYDSLTGNADIAMYRAKENGK 747 Query: 249 ----VVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHP 304 + L R + ++ A++RE+F + YQP + V G+E LLRW Sbjct: 748 NQMEMYSSEINTLTMERFQMENQLRKALEREEFVLHYQPQFHLENNEVLGIEALLRWNSS 807 Query: 305 VAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSE 364 G + P FI AE +I+P+ + + R +NI+ L + Sbjct: 808 DRGIVSPMEFIPLAEETGLIIPIGYWVLKEACRQNKRWMDQGHRPKIVSVNISARQLQEK 867 Query: 365 SFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHS 423 F ++ +L + LEITE +K + + + L +G++IAIDDFGTG+S Sbjct: 868 DFVQAVKSILEDTQLPTQYLCLEITESTAIKNIDISMNMLKELGELGIKIAIDDFGTGYS 927 Query: 424 ALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARW 483 +L L++ + +KID+ FI + + ++ A++ +A L + AEGVET +Q Sbjct: 928 SLAMLKQLPISNIKIDKSFIRDMDVDKDDGAIVRAIIAMAHSLELTVTAEGVETEDQKNI 987 Query: 484 LSERGVNFMQGYWISRPLPLDDFVRWLKK 512 L + N++QGY S+PLP ++ +R++++ Sbjct: 988 LLQEKCNYLQGYLYSKPLPAEECLRFVQE 1016 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 79/244 (32%), Positives = 131/244 (53%), Gaps = 1/244 (0%) Query: 275 EQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFEL 334 +F + YQP VD + ++ G+E L+RW P AG +PP +FI AE +I PL++ + Sbjct: 808 NEFLLHYQPQVDIVSGQIVGIEALVRWHDPEAGLVPPSSFIPLAEESGLIGPLSEWVLRE 867 Query: 335 IARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDML 394 R + + +N++ + + ++L + LE+TE ++ Sbjct: 868 ACRQNKAWQDQGLPPARVSVNLSARVFQQRNIAKLVMQVLAETGLEPRYLELELTESTIM 927 Query: 395 KE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITS 453 + +EA + LH++G+ +AIDDFGTG+S+L YL+RF +D LKIDR F++ IG Sbjct: 928 RNAEEAVLMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGVSGDDE 987 Query: 454 PVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKP 513 + A++ LA L + +AEGVET Q +L ER + MQG++ ++PL + L Sbjct: 988 TITSAIIALAHSLKLQVIAEGVETSAQLDFLKERACDEMQGFYFAKPLSTEGISELLHGG 1047 Query: 514 YTPQ 517 P+ Sbjct: 1048 LVPE 1051 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 85/305 (27%), Positives = 138/305 (45%), Gaps = 10/305 (3%) Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSV------RMRPGRE 267 + + +Y DD D M C+Y + R + Sbjct: 672 FISASVGISVYPDDSLDVDGLIKAADIAMYQVKNKGKNNHCFYSADLSQNAVERFTLENQ 731 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A+ R+QF V YQ V + R+ G E L+RW HP G + P FI AE +I+P+ Sbjct: 732 LRRALARDQFEVYYQAQVSLETGRIIGAESLIRWIHPELGVVSPAKFIPLAEETGLIIPI 791 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + + A E +N++ + +F + +L + LE Sbjct: 792 GEWVLRQSAMQVKEWHDQGFDIDWVSVNVSGVQIQRSNFADTVYGILVETDCESHLLELE 851 Query: 388 ITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 ITE ++ E +F + +GV +AIDDFGTG+S+L +L+R LD +KID+ F+ + Sbjct: 852 ITESTVMHNTEYVIDVFDRIKHLGVRLAIDDFGTGYSSLSHLKRLPLDKIKIDQSFVRDL 911 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 + + + A+ +A+ L +AEGVET +QA +L + G QGY SRP+ +F Sbjct: 912 PNNSDDAAIATAINAMAQSLGFTVIAEGVETRQQASFLKKIGCQQGQGYLYSRPVTASEF 971 Query: 507 VRWLK 511 L+ Sbjct: 972 TALLR 976 >UniRef50_A9AQW1 Diguanylate phosphodiesterase n=16 Tax=Burkholderia cepacia complex RepID=A9AQW1_BURM1 Length = 588 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 141/517 (27%), Positives = 226/517 (43%), Gaps = 17/517 (3%) Query: 1 MFIRAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFAD 60 +F R+ + R ++A V++ L A + D+ +D Sbjct: 71 VFQRSAVWLRLAFCAVVIACVLVPAGALVLAGRYARDAVARHEGLVAGDIAASVDRILNS 130 Query: 61 LKST-TDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNE 119 L+S D L PL C+Q L +R LV + CSSA G +D PL+ Sbjct: 131 LRSRHADVLPPLVGRPCRQIFAPLAEAETRLRYLRAIALVNGNRLTCSSALGAIDAPLDA 190 Query: 120 LIPALDINKNVD---MAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYS 176 + A D +A+L TP P +V + +++GV + + Sbjct: 191 YVRAPAATPAADGTRIALLSETPYQRGIPVLVAF--RATARDAGVLYLIEGDYVADALAH 248 Query: 177 SRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDV 236 S + L I R + + P TV + A + V Sbjct: 249 SGSYGAESATLSIAGAGRLDHRGRFIPASRAVRPRGTAIASRAWPFTVSVVASAQYVSQV 308 Query: 237 --WYAFLLGGMSGTVVGLLCYYLM---SVRMRPGREIMTAIKREQFYVAYQPVVDTQALR 291 Y L G ++ V L+ + + R + + A++R +F+V YQP+V+ + R Sbjct: 309 ERRYRLLFGTIALLVDALVVAAYLIATAPRRLLLKAVGDALRRNEFHVVYQPIVEIETRR 368 Query: 292 VTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVK 351 G+E LLRW HP G I P AF+ ES ++ +T+++ + L +P ++ Sbjct: 369 TVGVEALLRWHHPKWGAISPTAFVPQVESSAVLPRVTEYVLRTAVSELTALAPAMP--LR 426 Query: 352 FGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLK-EQEATQLFAWLHSVG 410 IN+AP L F + + + + LP F +VLE+TER +L+ T +FA L + G Sbjct: 427 IAINVAPKDLERPRFMSIVDEAIRRLP-PGFTLVLEVTERVLLEKNPRTTAMFAALRAKG 485 Query: 411 VEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLT 470 V+ AIDDFGT HS L L RF DY+KIDR F+ + + ++ +++ + +A + Sbjct: 486 VKFAIDDFGTQHSNLDMLSRFPFDYVKIDRQFVAQL--DGGSARLIEGIAAVAHHYGLKI 543 Query: 471 VAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 VAEGVET EQ R L G+ + QGY RP + + Sbjct: 544 VAEGVETEEQHRALHAVGIQYAQGYLYRRPQRAEQLM 580 >UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=C6D7W4_PAESJ Length = 1095 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 93/341 (27%), Positives = 159/341 (46%), Gaps = 13/341 (3%) Query: 186 ALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGM 245 + N+A+ + E + E I + + +Y +D + + Sbjct: 597 HIRDNNSAIEVARRIIERTREPFYIEDYELFIT-TSIGISIYPNDGDDSSTLMKNADSAL 655 Query: 246 S-GTVVGLLCYYLMSVRMR--------PGREIMTAIKREQFYVAYQPVVDTQALRVTGLE 296 +G Y + + M +++ AI+R++ + YQP V+ + G E Sbjct: 656 FRAKDLGKNGYQIFTSSMNVQTYKVFTLEKDLRKAIQRDELEMYYQPKVNIHTGEIVGAE 715 Query: 297 VLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINI 356 L+RW HP G + P+ FI +E +I+ L + + R E + + IN+ Sbjct: 716 ALIRWNHPEWGLVSPNEFIPISEETGLILSLGNWVKRTVCRQNKEWQLAGLKPIPISINV 775 Query: 357 APDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAI 415 S+ F IQ++L + +EITE +L+ E L+ +GV I++ Sbjct: 776 TAKRFLSKDFMDAIQQILAETGLEPHYLEIEITESSLLENAETVMHTLDSLNKLGVTISL 835 Query: 416 DDFGTGHSALIYLERFT--LDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAE 473 DDFGTG+S+L YL+RF ++ LKIDR FI+ + + + ++ A++ LA+ +NM VAE Sbjct: 836 DDFGTGYSSLSYLKRFKHTINILKIDRSFIHDLHQGSDDNAIISAIIQLAQHMNMSVVAE 895 Query: 474 GVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPY 514 GVET EQ L + +QGY SRP+ + F + LK+ Sbjct: 896 GVETGEQLHILKLLKCDLVQGYLFSRPVQAEAFAQLLKRGS 936 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 86/323 (26%), Positives = 149/323 (46%), Gaps = 10/323 (3%) Query: 204 VNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS---------GTVVGLLC 254 +++ + + G + + LY + + + M Sbjct: 760 LHQPFLLSNAREVMIGTSIGISLYPEHGSTAEELMQQADTAMYRAKHDGRDGYRYFSEEL 819 Query: 255 YYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAF 314 + R+ + + AI ++F V YQP + + ++ G E LLRW P G IPP F Sbjct: 820 FLKAKARLELEQRLHRAITGQEFKVFYQPQISIKTNQIIGAEALLRWDDPEYGLIPPSEF 879 Query: 315 INFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLL 374 I+ AE +I + + + R + + +N++P LH + I +L Sbjct: 880 ISVAEETGLIQNIGEWVLYETCRQGRDWLDQHLPPINLAVNLSPLQLHHGDVRQLIGTIL 939 Query: 375 TSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTL 433 + + LE+TE ++++QE ++ L G+ IAIDDFGTG+S+L YL++F L Sbjct: 940 HNSGFPAHHLELELTESALMEQQEETVKILQGLRQQGIRIAIDDFGTGYSSLAYLKQFPL 999 Query: 434 DYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQ 493 D LKID+ F+ I E + ++ + L + +AEGVET Q +L ++G ++ Q Sbjct: 1000 DVLKIDKRFVEDIPHERDDMEIAATIVAMGHSLRLTVLAEGVETKAQLEFLEQQGCDYYQ 1059 Query: 494 GYWISRPLPLDDFVRWLKKPYTP 516 GY S PLP ++F + L + P Sbjct: 1060 GYLYSMPLPAEEFAQLLSQQNPP 1082 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 80/271 (29%), Positives = 135/271 (49%), Gaps = 1/271 (0%) Query: 243 GGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWR 302 G + V + ++ ++ A+ +E+F + YQP V+ ++ GLE L+RW+ Sbjct: 589 GRNNFQVFAEEMHREALNQLTLEADLRRALIKEEFLLYYQPQVEISTGKIVGLEALIRWQ 648 Query: 303 HPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLH 362 HP G +PPD FI AE +I P+ Q + + + V+ +N++ H Sbjct: 649 HPTLGFVPPDQFIPLAEEIGLIAPIGQWVLQTACIQHQSWQAEGLPPVRIAVNLSARQFH 708 Query: 363 SESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTG 421 I + L + + LEITE +++ E Q L +G+ I IDDFGTG Sbjct: 709 QSQLINIILQTLETTEIDPQYLELEITESAAMQDVEFTIQTLQELREMGLHITIDDFGTG 768 Query: 422 HSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQA 481 +S+L L+ F L+ LKIDR F+ I + + + ++ L++ L + VAEGVETP+Q Sbjct: 769 YSSLNVLKHFPLNTLKIDRSFVQDIVENSRDAAIAQTIVALSQGLKLKVVAEGVETPQQL 828 Query: 482 RWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 +L + QGY+ P+P + + L++ Sbjct: 829 SFLRSIHCDLAQGYYFCPPVPAIEIAKLLRQ 859 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 403 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 83/305 (27%), Positives = 143/305 (46%), Gaps = 10/305 (3%) Query: 221 PLTVRLYADDWTWNDVWYAFLLGGMSG---TVVGLLCYYLMSV------RMRPGREIMTA 271 + + +Y DD + +V M ++ + R+R + A Sbjct: 530 SVGIAIYPDDGSTPEVLRMNADTAMYRAKERGKNNFQFFTADMNASTLARLRLESNLHRA 589 Query: 272 IKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHL 331 + R++F + +QP VD + G+E LLRWR G + P FI AE +I + + + Sbjct: 590 LARQEFQLHFQPKVDLAHGHIYGMEALLRWRSHELGPVSPADFIPIAEESNLISTIGEWV 649 Query: 332 FELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITER 391 E R A + + +N++ + A ++++L + LEITE Sbjct: 650 LEQACRQARHWLNLGLLPGTVAVNLSSKQMTQGDIVATVRRILEHSNLPGHYLELEITES 709 Query: 392 DMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTET 450 + E + L ++GV IAIDDFGTG+S+L YL++ +D LKIDR F+ + + Sbjct: 710 VAMDNTGEMIRTLKNLKALGVRIAIDDFGTGYSSLSYLKQLPIDVLKIDRSFVTDLHEDR 769 Query: 451 ITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 + + A++++ + LN+ VAEGVE E ++L + G + QGY SRP+P + L Sbjct: 770 DDAAIASAIISMGQSLNLQPVAEGVEREEHRQFLLDHGCQYGQGYLFSRPVPAATMEQLL 829 Query: 511 KKPYT 515 + Sbjct: 830 LESQA 834 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 403 bits (1036), Expect = e-111, Method: Composition-based stats. Identities = 81/316 (25%), Positives = 149/316 (47%), Gaps = 12/316 (3%) Query: 206 ELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMS----- 259 E +P E I+ + + ++ D+ D M G C+ + Sbjct: 730 EPFKLPSSEVVIS-ASIGIGVFPDNGDSVDSLMMNADSAMYRAKEKGRNCFQFYTKEMNQ 788 Query: 260 ---VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFIN 316 R+ ++ A++R++F + YQP D R+ G E L+RW+HP G + P FIN Sbjct: 789 YAQERLELELDLRKALERDEFVLHYQPQFD-PNGRIIGCEALIRWQHPDKGLLSPGEFIN 847 Query: 317 FAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTS 376 AE +IVP+ + + + + +N++ ++ +T+ Sbjct: 848 MAEITGLIVPIGKWVIDTACMQHKMWLSQGYPALNISVNLSGRQFLHHDLLETVKNAITT 907 Query: 377 LPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDY 435 + LE+TE M+ +E + + S+G+ ++IDDFGTG+S++ L+RF ++ Sbjct: 908 SGITPSCLELELTESIMMVNVEETIRTLNAISSLGIHMSIDDFGTGYSSMSCLKRFPVNK 967 Query: 436 LKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGY 495 LKID+ F+ + + ++ +++ +A LN+ +AEGVET EQ +L QGY Sbjct: 968 LKIDQSFVRGLPQDKEDVAIVKSIIVMAHALNLTVIAEGVETLEQLEFLKSSRCEEFQGY 1027 Query: 496 WISRPLPLDDFVRWLK 511 + SRP+ D ++L+ Sbjct: 1028 YFSRPILAADIEQYLQ 1043 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 403 bits (1036), Expect = e-111, Method: Composition-based stats. Identities = 82/254 (32%), Positives = 137/254 (53%), Gaps = 4/254 (1%) Query: 258 MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 + VR +++ A+ +QF + YQ + R+TG EVLLRW+HP G + P FI Sbjct: 571 VKVRAEMEDDLLRALAEKQFLLHYQAQM--VGERLTGAEVLLRWQHPQRGMVSPAEFIPL 628 Query: 318 AESQKMIVPLTQHLFELIARDAAELE-KVLPVGVKFGINIAPDHLHSESFKADIQKLLTS 376 AE +I+PL + E A+ + + +N++ F + +L Sbjct: 629 AEETGLILPLGHWVLETACTQLAQWAGRPEVAHLTLAVNVSAHQFRQNDFVDQVLGVLEK 688 Query: 377 LPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDY 435 A+ ++ LE+TE +++ ++ A L GV ++DDFGTG+S+L YL+R LD+ Sbjct: 689 TGANPQRLKLELTESLLVENVEDIIDKMAALKHRGVGFSLDDFGTGYSSLSYLKRLPLDH 748 Query: 436 LKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGY 495 LKID+ F+ + T++ + + ++ LA L + +AEGVET Q +L+ G + QGY Sbjct: 749 LKIDQSFVRDVLTDSNDASIARTIVALANSLGLGVIAEGVETEAQRDFLASSGCHTYQGY 808 Query: 496 WISRPLPLDDFVRW 509 + SRPLP++DF + Sbjct: 809 YFSRPLPIEDFESF 822 >UniRef50_B1Y5R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Burkholderiales RepID=B1Y5R0_LEPCP Length = 863 Score = 403 bits (1036), Expect = e-111, Method: Composition-based stats. Identities = 87/333 (26%), Positives = 157/333 (47%), Gaps = 10/333 (3%) Query: 189 IGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-- 246 + + + R++N + ++ G + + Y D + + Sbjct: 509 VAGLGIDLVAQRIINALSHSYQLGAQSAYIGACIGIAQYPADGPAAESLLNSADAALHRA 568 Query: 247 -GTVVGLLCYY------LMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLL 299 +L ++ R+ ++ A+++ + + YQP VD ++ R+ G+E LL Sbjct: 569 KAQGRNVLRFFSPELTIRARERLSLEADLRRALQQGELALHYQPQVDLRSGRIVGVEALL 628 Query: 300 RWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPD 359 RWRHP G I P AFI AE +I+ L + + +NI+ Sbjct: 629 RWRHPQRGWIAPGAFIPLAEECGLIIELGDWVLRAACEQIRHWSDAGVAPRQTAVNISAV 688 Query: 360 HLHSESFKADIQKLLTSLPAHHFQIVLEITERDML-KEQEATQLFAWLHSVGVEIAIDDF 418 + S +++ L + ++ LEITE ++ + + + +L A L ++GV+++IDDF Sbjct: 689 QISSGGLLDTVRRTLAATGIAPDRLELEITESFVMFERERSFKLLADLRALGVQLSIDDF 748 Query: 419 GTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETP 478 GTG+S+L YL++ + LKID F+ + + ++ AV+ + L + +AEGVE Sbjct: 749 GTGYSSLAYLQQLEVHKLKIDISFVRNMTRNRGNASIVKAVIAMGHSLGLEVIAEGVEEI 808 Query: 479 EQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 EQA L + MQGY +S+PLP+DD R L+ Sbjct: 809 EQAAHLLALQCDVMQGYLVSKPLPVDDITRLLE 841 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 87/258 (33%), Positives = 137/258 (53%), Gaps = 3/258 (1%) Query: 258 MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 +S R+ E+ AI+++QF + YQ VD + R G E LLRW HP G + P FI Sbjct: 755 LSARLALELELRKAIEKDQFQLYYQIQVD-ETHRPLGAEALLRWMHPEHGLMAPAEFIPM 813 Query: 318 AESQKMIVPLTQHLFELIARDAAELEKV-LPVGVKFGINIAPDHLHSESFKADIQKLLTS 376 AE +IVP+ + E EK L + IN++ H F +Q + Sbjct: 814 AEETGLIVPIGWWVLETACTQLKAWEKDPLTRNLVLSINVSAKQFHQPDFVDQVQAAVDH 873 Query: 377 LPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDY 435 + LE+TE +L+ + T + + L GV ++DDFGTG+S+L YL+R LD Sbjct: 874 YGIDPALLKLELTESILLENVDTTIKRMSALKKTGVGFSLDDFGTGYSSLQYLKRLPLDQ 933 Query: 436 LKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGY 495 LKID+ F+ I +++ ++ ++ +A+ + M +AEGVET EQ + L +G N QGY Sbjct: 934 LKIDQSFMQEITSDSSDMAIVSTIIAMAQSMQMGVIAEGVETEEQRQLLLRKGCNHFQGY 993 Query: 496 WISRPLPLDDFVRWLKKP 513 S+P+P++ F + L + Sbjct: 994 LFSKPVPVEQFEKLLHRG 1011 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 402 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 77/256 (30%), Positives = 139/256 (54%), Gaps = 3/256 (1%) Query: 260 VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAE 319 R R++ AI+ QF + YQ V + + + G E L+RW+HP G++ P FI AE Sbjct: 523 ARADMERDLRKAIEDNQFQLHYQAQVSS-SGQTLGAEALIRWQHPERGQVSPFNFIPLAE 581 Query: 320 SQKMIVPLTQHLFELIARDAAELEK-VLPVGVKFGINIAPDHLHSESFKADIQKLLTSLP 378 +I+P+ Q + + +K L + +NI+ LH E F ++ L Sbjct: 582 ETGLILPIGQWVLDSACAQLKAWQKNPLTQDLVLAVNISAKQLHQEDFVEQVKATLKRHD 641 Query: 379 AHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLK 437 + ++ LE+TE +++ + L +G+ ++DDFGTG+S+L YL++ L+ +K Sbjct: 642 INPARLKLELTESMLVENISDIITKMNILSKIGISFSLDDFGTGYSSLQYLKKLPLNQIK 701 Query: 438 IDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWI 497 ID+ F+ + T+ ++ ++T++ L++ +AEGVET E+ ++L + G QGY Sbjct: 702 IDQSFVRDLITDASDRAIVRTIITMSHSLDISVIAEGVETVEERQYLLDNGCTHYQGYLF 761 Query: 498 SRPLPLDDFVRWLKKP 513 S+P+P+++F LKK Sbjct: 762 SKPVPINEFEVLLKKG 777 >UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=A1TZQ7_MARAV Length = 819 Score = 402 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 90/332 (27%), Positives = 152/332 (45%), Gaps = 10/332 (3%) Query: 190 GNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GT 248 G A S + R++ M + + + + DD + M Sbjct: 480 GPDASSQVAERILKTFAPPFMLSGQEVFVTTSIGIATFPDDSDNSGTLLQHADAAMYEAK 539 Query: 249 VVGLLCYYLM--------SVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLR 300 G Y R++ + A++ +F + +QP+VDT + + E LLR Sbjct: 540 HKGKSAYARFTPEMSEVSHERLQMESHMRKALELGEFELYFQPIVDTASGGLVAAEALLR 599 Query: 301 WRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDH 360 W +P G + PD FI AE +I+P+ + + + + A + + + +N++P Sbjct: 600 WNNPAMGMVMPDRFIPLAEETGLIIPIGEWVVKEACQAAYCWQAMTGREISIAVNVSPRQ 659 Query: 361 LHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFG 419 F I + L + LEITER +L E + L VG+ +++DDFG Sbjct: 660 FRDPGFTDAIMRALNDSNLRPELLELEITERLILDNSIETADILKQLDKVGIRLSVDDFG 719 Query: 420 TGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPE 479 TG+SAL YL+ + D LKID+ F+ + E + ++ A++ +A L + VAEGVE + Sbjct: 720 TGYSALSYLKSYPFDTLKIDKSFVQDVLKENEDASLVRAIINMAHSLGLKVVAEGVEEED 779 Query: 480 QARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 +L ++ QGY+ SRPLP DF+ WL+ Sbjct: 780 LTHFLKAEHCDYSQGYFYSRPLPEQDFIHWLE 811 >UniRef50_B1M266 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Proteobacteria RepID=B1M266_METRJ Length = 960 Score = 402 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 98/330 (29%), Positives = 152/330 (46%), Gaps = 14/330 (4%) Query: 194 LSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWY-----AFLLGGMSGT 248 + + R++ V T G+ + + L D + D A G Sbjct: 627 AAILARRIIEVVGAPYSLTHHTISVGLTIGITLAPSDGSNADKLLKNAEVALDRGKTEAR 686 Query: 249 VVGLLCYYLMSVRMR----PGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHP 304 M R+ R++ A+ RE F V YQP+ + R+ G E LLRW HP Sbjct: 687 GAFRFFEPAMDARLIARRIMERDLRDALAREAFEVYYQPIYSLETDRICGFEALLRWNHP 746 Query: 305 VAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSE 364 V G + P FI AE +IVPL + + +AA P +K +N++ S Sbjct: 747 VRGFVSPAEFIPIAEELGLIVPLGEWVLRRACEEAARW----PDELKVAVNVSAVQFTSA 802 Query: 365 SFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHS 423 S +++ L ++ LEITE ++ AT + L ++GV +A+DDFGTG+S Sbjct: 803 SLVTAVREALRRTGLPGRRLELEITETVLVANPGATTAILHSLRALGVRVAMDDFGTGYS 862 Query: 424 ALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARW 483 +L YL F D +KID+ F+ + + T ++ AV+ L L M T AEGVET Q Sbjct: 863 SLSYLRSFPFDKIKIDQSFVRDLCVKDGTDFIVRAVIGLGASLGMTTTAEGVETEAQLAH 922 Query: 484 LSERGVNFMQGYWISRPLPLDDFVRWLKKP 513 L G + +QGY SRP+P+ + +++ Sbjct: 923 LRAEGCDEVQGYLFSRPVPVSEVASVIRRW 952 >UniRef50_A3J7L9 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Marinobacter sp. ELB17 RepID=A3J7L9_9ALTE Length = 564 Score = 402 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 85/241 (35%), Positives = 134/241 (55%), Gaps = 7/241 (2%) Query: 262 MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQ 321 + + A+ ++QF + YQP +D + RV GLE LLRW HP G I PD FI AE Sbjct: 312 LELETSLRQALGQKQFRLYYQPQIDIVSGRVLGLEALLRWHHPTQGMIAPDRFIPLAEKT 371 Query: 322 KMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHH 381 +I+P+ + + A G+K +N++ H + A I+++L Sbjct: 372 GLIIPIGEWVLREACSQVATQH-----GLKVAVNLSARQFHQKDLVAMIRRILDETGMPP 426 Query: 382 FQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDR 440 + LEITE ++ + E A L+ +GV +++DDFGTG+S+L YL+RF +D LKID+ Sbjct: 427 VNLELEITESALIYDVELAIATMEQLNDLGVSVSLDDFGTGYSSLSYLKRFPIDMLKIDK 486 Query: 441 GFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRP 500 FI+ + T+ ++ ++ ++ +A L + +AEGVET Q L E G + QGY I+RP Sbjct: 487 SFIDEVTTDPDSNVIVKTIIVMAHSLGLKVIAEGVETK-QLTMLREHGCDQAQGYLIARP 545 Query: 501 L 501 L Sbjct: 546 L 546 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 402 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 87/339 (25%), Positives = 149/339 (43%), Gaps = 11/339 (3%) Query: 186 ALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGM 245 ++ A L + E + E ++G + + +Y D M Sbjct: 497 SIRGAEDAAVAARRILDVLAEPFSVQGHEVFVSG-SIGISVYPRDGEDVQALLRCADIAM 555 Query: 246 SGTVVGL---LCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLE 296 +Y ++ R++ ++ A+KR +F + YQP V+ + G E Sbjct: 556 YRAKDSGKNDYQFYESTMSTGGLERLKLEGDLRYALKRNEFVLHYQPRVNINTGLIVGAE 615 Query: 297 VLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINI 356 L+RW P G + P FI AE I+P+ + + + + + +N+ Sbjct: 616 ALIRWDLPDRGLLWPLDFIPLAEESGFIIPIGEWVLRTACLQCRKWQDAGVPHPRVSVNL 675 Query: 357 APDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAI 415 + ++ + + ++L + LEITE M++ E A L +GV +AI Sbjct: 676 STHQFKKDNLTSTVDRILKETGLSPGLLELEITESAMMENLEKAVATLQGLAELGVNVAI 735 Query: 416 DDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGV 475 DDFGTG+S+L YL+RF + LKID+ F+ I + + + ++++L K LN+ VAEGV Sbjct: 736 DDFGTGYSSLGYLKRFPIGALKIDQSFVRHIPSNIDDTAIAMSIISLGKTLNLKVVAEGV 795 Query: 476 ETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPY 514 ET EQ L + QGY S+P+ D +L P Sbjct: 796 ETQEQLTVLRNYQCDEAQGYLFSQPVDADRMTEFLVNPS 834 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 402 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 82/337 (24%), Positives = 145/337 (43%), Gaps = 10/337 (2%) Query: 186 ALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGM 245 + + S L + + + G + + ++ +D + M Sbjct: 1005 HINEPEDSAIVARSLLETLAQPFVLHGEREIFIGASIGISIFPNDGDSAEQLIQHADAAM 1064 Query: 246 -SGTVVGLLCYYLM--------SVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLE 296 +G Y+ + + + AI Q V YQP VD + G E Sbjct: 1065 HQAKTLGRNTYHFYTEDLSRASNEHLELENRLRHAITANQLRVYYQPQVDIATGHIIGAE 1124 Query: 297 VLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINI 356 L+RW+ P G + P FI AE +I + + + + + +N+ Sbjct: 1125 ALVRWQDPERGLVQPGQFIPLAEETGLIGAIGEWVLKETCLQGMRWIDAGLPFLTLAVNL 1184 Query: 357 APDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAI 415 +P + I K+L ++ LE+TE ++++ ++ ++ L + + +AI Sbjct: 1185 SPHQFLRGNIAGLISKVLAETGFPADRLELELTESALMQQGEDVIKMLHLLRAQDIRLAI 1244 Query: 416 DDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGV 475 DDFGTG+S+L YL+RF LD LKID+ F++ I + ++ + L +AEGV Sbjct: 1245 DDFGTGYSSLSYLKRFPLDILKIDKSFVDDIPFHQDDMEIAATIIAMGHILGFKVLAEGV 1304 Query: 476 ETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 ET EQ +L RG + QGY S P+P ++F + LK+ Sbjct: 1305 ETREQLEFLQARGCDLYQGYLTSPPIPAEEFEKLLKE 1341 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 402 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 85/303 (28%), Positives = 143/303 (47%), Gaps = 11/303 (3%) Query: 219 GIPLTVRLYADDW-----TWNDVWYAFLLGGMSGTVVGLLCYYLMSV----RMRPGREIM 269 + + ++ DD + A SG M+ R+ ++ Sbjct: 437 SFSIGISVFPDDAMDPDTLIRNADIAMYRSKASGRNQFQFFTADMNAHALERLALENDLH 496 Query: 270 TAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQ 329 A++R +F + +QP + + + G E LLRW+HP G + P FI AE +IVP+ Sbjct: 497 RAVERGEFRLMFQPQFE-GSGSIIGAEALLRWQHPQRGLVTPAEFIPVAEETGLIVPIGT 555 Query: 330 HLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEIT 389 + E + + +NI+ ++ I++LL + LE+T Sbjct: 556 WVLERACQQVRAWRDAGLKKITVSVNISALQFSQKNLLELIRRLLAVSNIEPGTLELELT 615 Query: 390 ERDMLKEQEATQ-LFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGT 448 E ++ + AT L + L +GV +AIDDFGTG+S+L YL F + LKID+ F+ + Sbjct: 616 ESVLMHDHVATSGLMSELKEMGVRMAIDDFGTGYSSLSYLRSFPISKLKIDQSFVRDLSD 675 Query: 449 ETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVR 508 + A++ LAK LNM +AEGVET +QA +L + + QG++ S+P+ + F Sbjct: 676 GGDAGAITGAIIGLAKNLNMRVIAEGVETAQQASFLQAQCCDEFQGHFFSQPVSPEKFAE 735 Query: 509 WLK 511 L+ Sbjct: 736 LLR 738 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 103/478 (21%), Positives = 189/478 (39%), Gaps = 42/478 (8%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTF 96 ++ L + L F L +R Q A A +++ F Sbjct: 595 RDITEKKLAEAQIQQLAH-FDQLTGLPNRSQLHDRFRYALSLAQRHGDQLAIMFLDLDHF 653 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 + D T S ++ + ++ + A + + ++ L G + P Sbjct: 654 KNIND--TLGHSVGDQLLVDVSRRLKA-ALREEDSLSRLGGDEFILLLP----------G 700 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVA-LIIGNTALSTFSSRLMNVNELTDMPVRET 215 + + + L ++ + E + V+ + IG +++ D + Sbjct: 701 TDEAQASQVATKLLAAVAQPCQIEQNELVSTVSIGIALYPNDGQDFETLSKNADAAMYRV 760 Query: 216 KIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKRE 275 K A R + + + ++ + A+ R Sbjct: 761 KQASRN-DFRFFTQEMQTHSART-----------------------LQLVNALRHALPRH 796 Query: 276 QFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELI 335 +F + +QP V Q + G E LLRWRHP G I P FI AE I+ + + + Sbjct: 797 EFELHFQPQVALQDGHIVGAEALLRWRHPELGMISPAEFIPIAEDSGQILAIGEWVLRTA 856 Query: 336 ARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITE-RDML 394 R + + +N++ + A + ++L + LE+TE M Sbjct: 857 VRQLKQWLDAGLRPMVIAVNLSAVQFRHPNLMALVTRILDEAALPPEFLELELTEAAAMD 916 Query: 395 KEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSP 454 A + L G+ ++IDDFGTG+S+L YL++F ++ LKID+ F+ I + Sbjct: 917 DPPAAIAIMNKLDEHGIRMSIDDFGTGYSSLSYLKKFKVNKLKIDQSFVRDISDDPDDKA 976 Query: 455 VLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 ++ A++ LA L M T+AEGVET Q +L +G + +QGY++S+PLP D F +++ Sbjct: 977 IVTAIINLASSLGMHTIAEGVETASQLAFLRLQGCDEVQGYYVSKPLPKDQFEAFVRN 1034 >UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LZH2_BACS4 Length = 1071 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 85/354 (24%), Positives = 154/354 (43%), Gaps = 10/354 (2%) Query: 164 ALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLT 223 +++ L +++ V I + ++N+ + Sbjct: 216 LVSIVSKSDLLVRKGGDEFVIVLPSIKKDQVLKVVDNIINLLTSPFKIKSYDIFTSPSIG 275 Query: 224 VRLYADDWTWNDVWY-----AFLLGGMSGTV-VGLLCYYLMSVRMRP---GREIMTAIKR 274 V ++ +D D+ Y A SG + M P E+ AI++ Sbjct: 276 VSIFPEDGKTKDLLYKHAEFAMYQAKKSGNGQYHFFSSAEFNGDMNPYTIEVELRKAIEQ 335 Query: 275 EQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFEL 334 +QF + YQP ++ + G+E L+RW HP G I P +FI AE +IVP+ + E Sbjct: 336 KQFTLHYQPRINLSTGELIGVEALIRWEHPKWGLISPASFIPIAEDSGLIVPIGNWVLEE 395 Query: 335 IARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDML 394 + + V +N++P + + I+ L + + +EITE Sbjct: 396 ACKQNKIWQVSGMSCV-VSVNLSPKQFAHTNLASVIKNTLFNTGLDPHLLEIEITESMTA 454 Query: 395 KEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSP 454 + +G++++IDDFGTG S+L YL++F ++ LKIDR F++ + Sbjct: 455 DITRTVATLEEIKKLGIQVSIDDFGTGFSSLYYLKKFPVNTLKIDRSFVSELHNNPDEET 514 Query: 455 VLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVR 508 ++ ++++A+ LN+ VAEG+ET EQ +L + + QG+ S+PLP Sbjct: 515 IVKTIISMARNLNLNVVAEGIETKEQLAFLQQHLCHEGQGFLFSKPLPPSVLEE 568 >UniRef50_Q0G5H0 GGDEF family protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G5H0_9RHIZ Length = 684 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 97/405 (23%), Positives = 168/405 (41%), Gaps = 15/405 (3%) Query: 118 NELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSS 177 + D + ++ P + + +LK + + L Sbjct: 275 DRCAKTRDTGAEFSLIMIDLDRFKPVNDTLGHTTGDAVLKRVANRLEHVIRASDFLARLG 334 Query: 178 RQEDYDGVALIIGNTA-LSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDV 236 E G+ + + R+++V + G L V + T D Sbjct: 335 GDEFAIIALGSTGDRSNVLRLCDRIIDVLSRPFIINGHVIELGASLGVAIAPAHGTTADD 394 Query: 237 WYAFL-LGGMSGTVVGLLCYYLMS--------VRMRPGREIMTAIKREQFYVAYQPVVDT 287 + + G Y L +R ++ A+ RE+F V YQP VD Sbjct: 395 LTQSADIALYAAKDAGRSTYKLFETAMADEVQLRRSLEIDLRRALNREEFEVYYQPQVDA 454 Query: 288 QALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLP 347 ++ +G E L+RWRHP G + P FI AE +I P+ + RDA P Sbjct: 455 KSGDYSGAEALIRWRHPQRGMLSPVVFIPLAEELGLIGPIGNWVLRQACRDAVTW----P 510 Query: 348 VGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDML-KEQEATQLFAWL 406 + +N++P + ++ +L ++ LEITE ++ + +A + L Sbjct: 511 SHLSVAVNLSPAQMMDRRLPKSVKSILNETGLDPARLELEITETSLIGNDVQALAVLNEL 570 Query: 407 HSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRL 466 ++G+ I++DDFGTG+S+L YL RF ++ +KIDR FI+ I T+ ++ ++ A+ L L Sbjct: 571 RAMGIAISLDDFGTGYSSLSYLHRFPINRIKIDRSFIDRIPTDVDSAAIVQAIAKLGGSL 630 Query: 467 NMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 M AEG+E EQ + G + +QGY S+P+P + Sbjct: 631 GMKITAEGIENEEQWSFSKTEGCDHLQGYLFSKPIPGSEIGALFD 675 >UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1G1_PELCD Length = 1061 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 93/324 (28%), Positives = 155/324 (47%), Gaps = 10/324 (3%) Query: 201 LMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSV 260 L + + RE + L + +Y D + M + L + Sbjct: 735 LDRITAPFQIADREITVTA-SLGISIYPQDGEDEETLIRNADIAMYQAKEEGNAFRLYAP 793 Query: 261 RM--------RPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPD 312 M ++ A+ R + + YQP +D + ++TG E L+RW+HPV G I P Sbjct: 794 EMNIVVHEAMEMETDLRRALDRGELLLHYQPKIDLDSGKITGAEALVRWQHPVRGMIAPG 853 Query: 313 AFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQK 372 FI AE +I+P+ + + E I + V N++ ++ A IQ+ Sbjct: 854 MFIPLAEETGLILPIGEWVLENICLQIKSWQTQGFPLVPIAANLSARQFRNDELIATIQR 913 Query: 373 LLTSLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERF 431 +L + LE+TE +++ Q A + L+++GV +A+DDFGTG+S+L YL RF Sbjct: 914 ILQDTGLPPHLLELELTESMIMRNVQTAAETMQELNALGVSLALDDFGTGYSSLNYLRRF 973 Query: 432 TLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNF 491 +D LKIDR FI+ + + + V +++ +A L + VAEGVET EQ +L + + Sbjct: 974 PVDCLKIDRSFISDVADDPSAAAVATSIIAIAHSLGLQAVAEGVETEEQLEFLRQCACDS 1033 Query: 492 MQGYWISRPLPLDDFVRWLKKPYT 515 QGY S PL +++F L++ T Sbjct: 1034 YQGYLYSAPLAVEEFTAMLRQEST 1057 >UniRef50_A1ASF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASF8_PELPD Length = 1023 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 94/355 (26%), Positives = 158/355 (44%), Gaps = 9/355 (2%) Query: 168 NLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLY 227 S+ E + + + ++T +RL + + + + V + Sbjct: 280 RQHDSVARIRHDEFAVMLGGVTNDGDVTTILNRLQQIFAVPLPTSQGECAIPACMGVACF 339 Query: 228 ADDWTWNDVWYAFLLGGMSGTVVGL--LCYYLMSV------RMRPGREIMTAIKREQFYV 279 D ++ M+ L +Y S+ R ++ AI +F++ Sbjct: 340 PTDGLTANIIMQNAHIAMNQARQAGIPLQFYSESMNRKAMERFAIETCMLRAIDAGEFFL 399 Query: 280 AYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDA 339 YQP V+ +++TG+E L+RW+ P G IPPD FI AE MIV L + R Sbjct: 400 CYQPKVEIHDMKLTGVEALVRWQRPGEGVIPPDRFIALAEENGMIVRLGGWILGEACRQN 459 Query: 340 AELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKE-QE 398 + +NI+ L SF ++++L + LE+TE ++ E Sbjct: 460 RAWQDAGLPRTVVSVNISARQLRENSFVEQVERILEETGLEPCYLDLELTESVVMANSDE 519 Query: 399 ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDA 458 Q L +GV I++DDFGTG+S+L YL+ +D +K+DR F+ I + +++A Sbjct: 520 IVQKLTRLKQLGVGISVDDFGTGYSSLSYLKHLPVDTIKVDRSFVRDIVHDPDDKAIVEA 579 Query: 459 VLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKP 513 V+ + L + +AEGVET EQ +L + N QGY+ S+PL R+L K Sbjct: 580 VIAMGHALGLTVIAEGVETLEQLEFLRSQNCNQAQGYYFSKPLDSGHLARFLSKH 634 >UniRef50_Q1GYK0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GYK0_METFK Length = 617 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 95/346 (27%), Positives = 159/346 (45%), Gaps = 10/346 (2%) Query: 177 SRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYA-DDWTWND 235 S E V I G L R+++ +L + + +Y DD N+ Sbjct: 259 SGDEFTIIVDSISGQKDLDILCWRILDALKLPQQIMGREIFISASIGTAIYPLDDEDANN 318 Query: 236 VWYAFLLGGMSGTVVGLLCYYLMSV--------RMRPGREIMTAIKREQFYVAYQPVVDT 287 + G Y + RM ++ AI+R +F + YQP + Sbjct: 319 LMIKADAAMYEAKRNGRNTYRHYAAGMQLYSLDRMSLETDLRLAIERNEFELYYQPQIAL 378 Query: 288 QALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLP 347 + +V G E L+RW HP G + P FI AE +IV + Q + R + Sbjct: 379 DSGQVVGKEALIRWHHPQRGLLTPIHFIEIAEETGLIVAIGQWVISEACRQHQAWLQEGF 438 Query: 348 VGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEA-TQLFAWL 406 ++ +NI+ + F ++ +L + + E+TE +++ +A + L Sbjct: 439 QPMRISVNISAMQFYQSDFCDMVEHILKETRINPAYLEFELTESMFMQDADAVVRTLHQL 498 Query: 407 HSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRL 466 +G+++AIDDFGTG+S L YL +F +D LK+D+ FI I E I ++ ++ LA+ + Sbjct: 499 SRLGIKLAIDDFGTGYSNLSYLRKFPIDRLKVDQSFIKGIEREPINVEIVKTIVALARSM 558 Query: 467 NMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 ++ VAEGVET + W G F+QGY S+PLP + F RW+++ Sbjct: 559 SLELVAEGVETDVELHWAESSGCTFVQGYRFSQPLPAEKFTRWVRE 604 >UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID=Q89VU0_BRAJA Length = 955 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 87/328 (26%), Positives = 150/328 (45%), Gaps = 15/328 (4%) Query: 191 NTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADD-WTWNDVWYAFLLGGMSGTV 249 + + RL+ + ++ G+ + + + D +++ L Sbjct: 621 PQSAEKLARRLVEIIGHPPPLESQSIHVGVSVGIAIAPDHGLDADELMKCADLALYQAKA 680 Query: 250 VGLLCYYLM--------SVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRW 301 G Y L R + A++ +F++ +QP V ++ +TG E LLRW Sbjct: 681 RGRGAYQLFEPEMEEEARSRHALEHNLRGALEAREFHLVFQPQVRLESSELTGFEALLRW 740 Query: 302 RHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHL 361 +HP G + P FI AE +IVP+ + + AA V +N++P Sbjct: 741 KHPSRGFVSPAEFIPIAEENGLIVPIGEWVLRTACATAASW-----PDVTVAVNLSPVQF 795 Query: 362 HSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGT 420 + A + L ++ LE+TE +L + EAT ++ L ++GV +++DDFG Sbjct: 796 RARGLAAMVTSALAEAGLPPQRLELEVTETALLDDSEATIEILHQLRALGVRVSLDDFGV 855 Query: 421 GHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQ 480 G+S+L YL +F D +KIDR F+ +G + ++ + +L L + T AEGVET EQ Sbjct: 856 GYSSLSYLRKFPFDRIKIDRSFVGTLGESPESVAIVRTIASLGSVLGVETTAEGVETEEQ 915 Query: 481 ARWLSERGVNFMQGYWISRPLPLDDFVR 508 ++ E G +QGY+ RP P + R Sbjct: 916 LDFVRECGCTAVQGYYFGRPCPAAEVAR 943 >UniRef50_Q7NXP8 Probable sensory box/GGDEF family protein n=1 Tax=Chromobacterium violaceum RepID=Q7NXP8_CHRVO Length = 712 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 85/263 (32%), Positives = 134/263 (50%), Gaps = 3/263 (1%) Query: 258 MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 M R+ + + AI + + YQP ++ RV G+E L+RW+HP G IPP FI Sbjct: 444 MRERVELEKSLRHAIDHGELVLHYQPQIELSTRRVVGVEALVRWQHPQKGMIPPMRFIPI 503 Query: 318 AESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSL 377 AE +I+PL + + R + ++ +N++ + +L Sbjct: 504 AEQSGLILPLGRWVLREACRQLKVWQDKGRDDLRMAVNLSVAQFTDHELPDFVADVLKET 563 Query: 378 PAHHFQIVLEITER-DMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYL 436 + LEITE ML Q++ + ++G+ +IDDFGTGHSAL YL RF +D L Sbjct: 564 GVSPRHLELEITESCTMLSPQQSIGMMERFRAMGIHSSIDDFGTGHSALAYLTRFPVDTL 623 Query: 437 KIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYW 496 KID+ FI I + + + D + LA R+ + VAEGVET +Q +LS V+ +QGY Sbjct: 624 KIDQSFIRNISNDEKGTALCDTIAYLAHRMGLQVVAEGVETQQQLTFLSSIHVDVVQGYL 683 Query: 497 ISRPLPLDDFVRWL--KKPYTPQ 517 + +PLP + ++ + +PQ Sbjct: 684 LCKPLPAVEAEAFILQQTGASPQ 706 >UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3H4_9PROT Length = 904 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 80/254 (31%), Positives = 141/254 (55%), Gaps = 3/254 (1%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R + ++ + ++QF + YQP + R+TG+E L+RW+HPV G +PP FI AE Sbjct: 649 RAKIEADLRQGLIKKQFLLHYQPQI-FSNGRMTGVEALVRWQHPVRGLVPPSDFIPLAEE 707 Query: 321 QKMIVPLTQHLFELIARDAAELE-KVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPA 379 +I+ L + E + AE + + +N++ H F IQ+++ A Sbjct: 708 TGLILQLGNWVLEAACKQLAEWATRPELADLTVAVNVSVQQFHQPEFVDHIQEVIRVTGA 767 Query: 380 HHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKI 438 + ++ LE+TE + + Q+ + L + G+ ++DDFGTG+S+L YL++ LD LKI Sbjct: 768 NPERLKLELTESMLAENVQDIIKKMFALKADGIGFSLDDFGTGYSSLSYLKQLPLDQLKI 827 Query: 439 DRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWIS 498 D+ F+ + T+ + + ++ LA+ L + +AEGVET Q +L G + QGY+ S Sbjct: 828 DQSFVRDVLTDPSDATIAKTIVNLAQSLGLSVIAEGVETEAQRNFLETSGCHSCQGYFFS 887 Query: 499 RPLPLDDFVRWLKK 512 RPLP+++F + ++ Sbjct: 888 RPLPIEEFEEYARR 901 >UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SC6_GEOMG Length = 821 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 94/354 (26%), Positives = 155/354 (43%), Gaps = 9/354 (2%) Query: 171 PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADD 230 +L E + T S + +++ R+T + + L+ D Sbjct: 459 DTLARLGGDEFVIIAPGVRAATDASLLADKILAALAEPFTLDRQTLHIATSIGIVLFPSD 518 Query: 231 WTWNDVWYAFLLGGMSGTV-VGLLCYYLMSV--------RMRPGREIMTAIKREQFYVAY 281 ++ M G Y S R ++ A+ +F++ Y Sbjct: 519 GGNGEMLLQRADMAMYAAKDRGGNSYRFFSAEMNTRAVERHELEEDMRQALTNGEFFLMY 578 Query: 282 QPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAE 341 QP V+T +V G+E L+RW HP G I P FI AE I L + + E R A+ Sbjct: 579 QPQVNTGTWKVVGVEALVRWNHPRKGVILPSRFIPVAEETGFISKLGRWVLEEACRQGAQ 638 Query: 342 LEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQ 401 + ++ G+N+ E + +L + +E+TE ++ + A Sbjct: 639 WQHDGLPPLQMGVNLCARQFTHEEIVGTVSDVLQKTGLPSELLEIELTETMLMDSETAVS 698 Query: 402 LFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLT 461 L ++GV +AIDDFGTG+S+ YL+ F LD +KID+ FI IG +++A++ Sbjct: 699 TLGQLKALGVRLAIDDFGTGYSSFNYLKHFPLDRIKIDQSFIRDIGQSRGNGAIIEAIVA 758 Query: 462 LAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYT 515 +A+ L +AEGVET EQ R+L +QG++ SRPL DD R +++ Sbjct: 759 VARSLGPEVLAEGVETEEQLRYLMSITCADIQGFYFSRPLLPDDVSRLIRESLP 812 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 99/317 (31%), Positives = 153/317 (48%), Gaps = 12/317 (3%) Query: 205 NELTDMPVRETKIAGIPLTVRLYADD-----WTWNDVWYAFLLGGMSGTVVGLLCYYLMS 259 N+ D+ E IAG + + ++ DD + A G V M+ Sbjct: 599 NQPFDVGGHEAYIAG-SIGIAIFPDDERDPILLMRNADAAMYRSKREGKGVFRYFTPEMN 657 Query: 260 VR----MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFI 315 R MR ++ AI+R + V YQP+VD+ R+ G E LLRW +PV GE+ P+ FI Sbjct: 658 ARALEHMRMESQLRHAIERNEMKVHYQPLVDSGTGRLVGAEALLRWSNPVLGEVSPEQFI 717 Query: 316 NFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLT 375 AE +I+ + + RDAA ++ + +NI+ + ++ L Sbjct: 718 PLAEETGLILSIGAWVLRTACRDAASWQRP-DHEIFVAVNISGKQFQKRTLVEIVRSSLN 776 Query: 376 SLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLD 434 + LE+TE +L+ QE + L S+GV AIDDFGTG S++ YL RF D Sbjct: 777 ESGLPPACLELELTESVLLEHTQETLSIIQELESLGVGFAIDDFGTGFSSISYLRRFPFD 836 Query: 435 YLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQG 494 LKIDR FI +G + ++ +++ +A +++ V EGVET Q +L G + QG Sbjct: 837 TLKIDRSFIKDLGDNEGDADLVKSIIAMANSMSLKVVGEGVETHGQREFLRLSGCHIAQG 896 Query: 495 YWISRPLPLDDFVRWLK 511 + SRP+P DF + Sbjct: 897 WLYSRPIPGKDFQELID 913 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 96/330 (29%), Positives = 157/330 (47%), Gaps = 11/330 (3%) Query: 198 SSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGL---LC 254 +S++++ E + E + + LY DD V M G Sbjct: 1005 ASKILSSLEKPFNLLTEEAFISASIGITLYPDDGNDVSVLMRNADAAMYLGKRGGRNDFK 1064 Query: 255 YYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGE 308 +Y M + R+R + + A+K+ +FY+ YQP++D + V G E LLRW +P G Sbjct: 1065 FYTMGMNEEAQSRLRIEKLLRYALKKNEFYLVYQPIIDLRFQTVIGAEALLRWNNPELGR 1124 Query: 309 IPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKA 368 + PD FI+ AE +I L + ++ + + +N++P Sbjct: 1125 VSPDQFISIAEETGLISELGAWVISQACQEVVNWQTQG-SPIWVAVNLSPRQFRESKLLE 1183 Query: 369 DIQKLLTSLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIY 427 I +T + + LEITE+ +L++ + + LH + ++IDDFGTG+SAL Y Sbjct: 1184 IISNAITLNGITNHYLELEITEKLLLEDFPGSKGIIEQLHEMDFRLSIDDFGTGYSALSY 1243 Query: 428 LERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSER 487 L +F + LKIDR FI I ++ ++ + L + +AEGVET EQA L Sbjct: 1244 LIKFPFNRLKIDRSFIADIPHNQEVLALVKTIIAMGHGLKLQVIAEGVETTEQANILEAE 1303 Query: 488 GVNFMQGYWISRPLPLDDFVRWLKKPYTPQ 517 G ++ QGY+ SRPL ++F R+L+ PQ Sbjct: 1304 GCDYAQGYFFSRPLLSEEFRRYLQSHQNPQ 1333 >UniRef50_A6WTB4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=20 Tax=Shewanella RepID=A6WTB4_SHEB8 Length = 1497 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 115/507 (22%), Positives = 216/507 (42%), Gaps = 31/507 (6%) Query: 34 VAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQ---QANPELTARAAFS 90 ++ + D L +++++ L + + L + C + +A + Sbjct: 983 QSFTQFVQMNDGLASEIKQLLSD--SQSWTGERELINASQQPCPVWLNVSVMQSANGKVT 1040 Query: 91 MNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIW 150 V F + ++K + + + +P + + + + K A++ Sbjct: 1041 HYVVVFSDITERKQTEADLRRLANYDVLTGLPNRSLFSSRLLQSIQAAQQTGEKLALLFL 1100 Query: 151 Y--RNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTA---LSTFSSRLMNVN 205 R + +S + + L + + + G L ++ + ++N Sbjct: 1101 DLDRFKHVNDSYGHSMGDALLVEASSRLQSCIASEHMLCRFGGDEFVILLRNANSIDDIN 1160 Query: 206 ELTDMPVRE----------TKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGL 252 + + + + + + ++ DD + + M G Sbjct: 1161 HIAERLLEQIVAPFKLYGREFYISTSIGISIWPDDAVQPEAFIKNADLAMYHAKEEGRGN 1220 Query: 253 LCYYLMSVR------MRPGREIMTAIKREQFYVAYQPVVD-TQALRVTGLEVLLRWRHPV 305 YY +R ++ AI+R++F + YQP +D + ++ G+E L+RW+HP+ Sbjct: 1221 FQYYSSERNAQALYHLRLEADLRKAIERQEFELYYQPQIDILRNDKLIGMEALIRWKHPL 1280 Query: 306 AGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSES 365 G I PD FI AE+ +IV + + + A K K +NI+ H Sbjct: 1281 DGFIRPDIFIKVAEACGLIVDIDRWVLRQACVQGAHWAKRYGSTFKLSVNISAVHFRQPD 1340 Query: 366 FKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSA 424 F DIQ +L + LEITE ++KE A + L S+G+E+AIDDFGTG+S+ Sbjct: 1341 FIEDIQSILHETQMPTASLGLEITEGVLMKELHVAKDHLSRLKSLGIEVAIDDFGTGYSS 1400 Query: 425 LIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWL 484 L YL F ++ LKIDR F+ I T ++ +++ LA+ L + VAEG+ET EQ + Sbjct: 1401 LAYLRHFEVNTLKIDRSFLIDIATNKADQAIVSSIIELARNLKLNVVAEGIETVEQLEQV 1460 Query: 485 SERGVNFMQGYWISRPLPLDDFVRWLK 511 RG +QGY+ ++P+ + DF R+L+ Sbjct: 1461 FSRGCYIIQGYYFAKPMCVADFERYLE 1487 >UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=B1XZA8_LEPCP Length = 1147 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 97/339 (28%), Positives = 154/339 (45%), Gaps = 10/339 (2%) Query: 187 LIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS 246 L + A S L ++E G+ + + +Y D + Sbjct: 806 LRHDDDAARLASELLSGLSEPWRSSEGVEVSVGVSIGICIYPDHGRTPQTLLQGADAALY 865 Query: 247 ---GTVVGLLCYY------LMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEV 297 G G+ YY + R+ + A+ Q + YQP VD ++ R+ G E Sbjct: 866 RAKGDGRGVYRYYADEMTRIARERLHIEARLRRALADGQLLLHYQPQVDLRSGRIIGAEA 925 Query: 298 LLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIA 357 L+RW+ P G IPP FI AE+ +I + + R A + +N++ Sbjct: 926 LVRWQDPEQGLIPPVRFIPVAEATGLIGEIGAWVLGEACRQARAWLDAGLPALTVAVNVS 985 Query: 358 PDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLK-EQEATQLFAWLHSVGVEIAID 416 P H + ++L + LE+TE +++ E EA Q+ L +GV +AID Sbjct: 986 PRQFHQADLATQVMQVLVETGLPPTHLELELTEGALMEREAEALQVLQRLRGLGVGVAID 1045 Query: 417 DFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVE 476 DFGTG+S+L L+RF +D LKIDR FI I + + A++ + L +L +AEGVE Sbjct: 1046 DFGTGYSSLASLKRFPIDVLKIDRSFITDIPDDPDDMEIAAAIIAMGHSLGILVLAEGVE 1105 Query: 477 TPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYT 515 T EQ +L +R + QG+ SRPLP F + L++ + Sbjct: 1106 TAEQLAFLQQRNCDRYQGFLRSRPLPAQAFEQLLREQAS 1144 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 93/332 (28%), Positives = 160/332 (48%), Gaps = 13/332 (3%) Query: 191 NTALSTFSSRLMN-VNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV 249 + L + +++ ++ D+ VRE + + + +Y DD M Sbjct: 345 DANLPRVADKILKALSSPFDLGVREVYSS-TSVGIAIYPDDGDEATDLLRHADMAMYAAK 403 Query: 250 VG---LLCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLR 300 +Y + RM + A+++E+F++ YQP +D +V G+E LLR Sbjct: 404 ESGGDTFRFYSSEMNARAVSRMDMEANLRRALEQEEFFIEYQPQIDLITNKVAGVEALLR 463 Query: 301 WRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDH 360 W+HP G IPP FI AE +I+PL + + + ++ + + GIN++ Sbjct: 464 WQHPQLGVIPPTQFIGLAEETNLILPLGEWVMRRVFEQCVMWKQEGYLPFRVGINVSGRQ 523 Query: 361 LHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFG 419 F + +LL A + EITE ++K+ + A L +G+ +AIDDFG Sbjct: 524 FVQPDFVDMVCRLLDETGAAPELLEFEITESVVMKDVDAAVLTLEALKKLGINMAIDDFG 583 Query: 420 TGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPE 479 TG+S+L L+ L+ LKID+ FI+ + +++A + +AKRL + AEGVET Sbjct: 584 TGYSSLSCLKHLPLNRLKIDKSFISDLQDNADDRAIVEATIAMAKRLELGVTAEGVETEG 643 Query: 480 QARWLSERGVNFMQGYWISRPLPLDDFV-RWL 510 Q ++ +R + +QG++ SRPL + WL Sbjct: 644 QYGFVQKRECDEVQGFYFSRPLSPSEVADAWL 675 >UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=cellular organisms RepID=B0CAC5_ACAM1 Length = 901 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 91/330 (27%), Positives = 156/330 (47%), Gaps = 13/330 (3%) Query: 200 RLMNVNELTDMPVRETKIAGIPLTVRLYADD-----WTWNDVWYAFLLGGMSGTVVGLLC 254 R+++ + + R + + +Y +D + A G L Sbjct: 552 RILDALKAAFVIRRHELFVTTSIGIAIYPEDGQEAEILLQNADVALYRSKEQGRGTCQLY 611 Query: 255 YYLMSVRMR--PGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPD 312 M+ + + + A+ R++F + YQP V+ + GLE L+RW HP G + P Sbjct: 612 NPTMNAKEQFILENSLRHALDRDEFILHYQPKVNICTGEIVGLEALVRWEHPEMGLVSPA 671 Query: 313 AFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQK 372 FI AE +IV L + + + A K+ + IN++ + + + + Sbjct: 672 TFIPIAEETGLIVELGEWVLRTACQQAVLWHKLGLAPLSVAINLSARQFYQPNLVEIVAQ 731 Query: 373 LLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERF 431 ++ S + Q+ LEITE +K E A + L ++GV IA+DDFGTG+S+L YL++ Sbjct: 732 VIESTGLNPQQLELEITETIAVKNMEFAKSILCNLQALGVHIAMDDFGTGYSSLNYLKQL 791 Query: 432 TLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNF 491 + LKID+ FI + + +++AV+ L K L++ VAEGV+ EQ L Sbjct: 792 PFNTLKIDQSFIQDLKPASKDVEIINAVIALGKGLDLKVVAEGVDNEEQLELLRSLNCEI 851 Query: 492 MQGYWISRPLPLD---DFVR--WLKKPYTP 516 +QGY SRPL +D D ++ WL++ + Sbjct: 852 VQGYLFSRPLSVDSTTDILQANWLQRNQSQ 881 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 84/251 (33%), Positives = 128/251 (50%), Gaps = 1/251 (0%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R++ + AI ++Q V YQP V + ++TG+E LLRW+HP G I P FI AE Sbjct: 682 RLKLETFLRVAIVQQQLSVYYQPKVSVLSGKMTGMEALLRWQHPELGFISPAVFIPIAEE 741 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +I + + A + V +N++ L ++F A + +L Sbjct: 742 TGLINEIGDWVLRQSCLQARLWQAQGYDIVPIAVNLSARQLKQDNFAARVVTILREAGLD 801 Query: 381 HFQIVLEITERDMLKEQEA-TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 +VLEITE ++ E+ Q+ L GV +A+DDFGTG+S+L L+ LD LKID Sbjct: 802 AHYLVLEITESMLMSTGESGLQILEQLRDDGVRLALDDFGTGYSSLSRLKNLPLDSLKID 861 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 + F+ I T+ + ++ A LA LN+ AEGVET EQ ++ QGY SR Sbjct: 862 QSFVRDIVTDPNDASIVSATAVLAHALNLKVTAEGVETQEQLDFIRMLNCEEYQGYLFSR 921 Query: 500 PLPLDDFVRWL 510 P+P + V++ Sbjct: 922 PIPASEVVKYF 932 >UniRef50_B7KEZ6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=3 Tax=Cyanothece RepID=B7KEZ6_CYAP7 Length = 589 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 86/376 (22%), Positives = 166/376 (44%), Gaps = 22/376 (5%) Query: 147 IVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNE 206 I Y + + N G A LN + L +++ ++ ++ ++ +L+ + Sbjct: 216 IAAQYLSQCINNQGSLARLNGDEFAILLKATQDKEI-----------VANYAQKLLKLFS 264 Query: 207 LTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVR----- 261 + + + + + Y +D + + M Y + Sbjct: 265 QPLLINEQEIFLSLSIGISFYPEDGSTLETLLQKANSAMKRAKYLGGDRYEFYPKCYQKI 324 Query: 262 -----MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFIN 316 + ++ A++R + V YQP + + + G E L RW HP G + P FI Sbjct: 325 PSPDYLELEADLRHALERNELEVHYQPRLSLSSGEIVGAEALTRWYHPRRGLVSPGIFIP 384 Query: 317 FAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTS 376 AE +I P+ + + + ++ ++ +N++ + + + K+L Sbjct: 385 IAEETGLIEPIGEWVLRTACEQSKIWQEKGLGLIRVAVNLSGRQFNQLNLSQWVAKILRE 444 Query: 377 LPAHHFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDY 435 + + LE+TE +++ E+ Q L ++GV+IAIDDFGTG+S+L YL++F D Sbjct: 445 TKINSHLLELELTESILVENASESIQKLNDLKTLGVKIAIDDFGTGYSSLSYLQQFPFDI 504 Query: 436 LKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGY 495 LKIDR F+ I + + + A++ LA +L + VAEG+ET + +L + MQGY Sbjct: 505 LKIDRCFVRNIDQNSKNAAITQAIIFLAHQLGLTVVAEGIETKSELSFLQNHQCDEMQGY 564 Query: 496 WISRPLPLDDFVRWLK 511 SR + +F ++ Sbjct: 565 LFSRSVKASEFEHLVQ 580 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 80/255 (31%), Positives = 140/255 (54%), Gaps = 1/255 (0%) Query: 258 MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 + R+ ++ A++ +Q + YQP V + ++ G+E L+RW+HP G IPP FI Sbjct: 558 LGHRLSLENDLWHALENQQLVLHYQPQVCMRNSQIIGMEALIRWQHPKLGMIPPLQFIPL 617 Query: 318 AESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSL 377 +E +IVP+ + E A +L+ ++ +N++ L + I+K L Sbjct: 618 SEDDGLIVPIGIWVMETAAHQNRQLQLAGYPPIRVAVNLSVRQLEQKDLVHCIEKTLQHS 677 Query: 378 PAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYL 436 + LEITE ++ +E+ + +GV++++DDFGTG+S+L YL+R ++ L Sbjct: 678 GLDPQCLELEITESMLMHNIEESIITLNRISDLGVQLSLDDFGTGYSSLSYLKRLPINRL 737 Query: 437 KIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYW 496 KID+ FIN I T + + +++ LA L + +AEGVE+ +Q +L E G + +QGY Sbjct: 738 KIDKSFINDITTTYNDAIIARSIIALAHSLEIQVIAEGVESADQYAFLLENGCDEVQGYL 797 Query: 497 ISRPLPLDDFVRWLK 511 +SRP P ++ L+ Sbjct: 798 LSRPRPFEEMEALLR 812 >UniRef50_B1XXA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XXA0_LEPCP Length = 771 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 106/340 (31%), Positives = 159/340 (46%), Gaps = 20/340 (5%) Query: 194 LSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWT-----WNDVWYAFLLGGMSGT 248 +S + R+++ + + + + +A D A S Sbjct: 415 ISATAQRILDALREPCAALGAQVPVRLSIGIARFAQDGASVDELMQHADLALYDAKASAP 474 Query: 249 VVGLLCYYLM----SVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHP 304 M R+ R++ AI ++Q + YQP VD Q VTG E LLRWRHP Sbjct: 475 GSMKFFAPRMGEQVRRRLVLERDLREAIDKQQLSLHYQPKVDLQTWEVTGFEALLRWRHP 534 Query: 305 VAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSE 364 G IPP FI AE +I+P+ + + + AA P ++ INI+P + ++ Sbjct: 535 EHGNIPPSEFIPVAEDSGLILPIGEWVLTQACQQAARW----PAPMQVAINISPVQVMAQ 590 Query: 365 SFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHS 423 + + + L + ++ LEITE + E L VGV+IA+DDFGTG+S Sbjct: 591 NLPEAVGRALKASGLAPRRLELEITESVFINETRGTVDRLHALRKVGVQIALDDFGTGYS 650 Query: 424 ALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARW 483 +L YL RF D LKIDR F+ + ++ +L LAK L M TVAEGVE P QA Sbjct: 651 SLAYLRRFPFDTLKIDRAFVREVLLSRDARAIVRNILALAKSLRMSTVAEGVEEPAQASV 710 Query: 484 LSERGVNFMQGYWISRPLPLDDFVRWL------KKPYTPQ 517 L G + +QG+ +SRP+P D+ +L + P P+ Sbjct: 711 LGNEGCDLVQGFLVSRPMPADEVTGFLLDWAKCRHPQPPR 750 >UniRef50_B2UJ08 Diguanylate cyclase/phosphodiesterase n=5 Tax=Ralstonia RepID=B2UJ08_RALPJ Length = 670 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 100/368 (27%), Positives = 154/368 (41%), Gaps = 28/368 (7%) Query: 165 LNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTV 224 + L ++ + + L G + R++ + V Sbjct: 282 DEFAVIAELSGRAQIAETEAATLADG------LAKRILAALGAPFSLDLHQIYVTASVGV 335 Query: 225 RLYADDWTWNDVWYAFLLGGM---------SGTVVGLLCYYLMSVRMRPGREIMTAIKRE 275 LY D V M + R+R ++ A+ RE Sbjct: 336 SLYPHDARDVQVLTRNADTAMYHAKNHGKNAAASFTSEMDQQARRRLRVEADLRRALDRE 395 Query: 276 QFYVAYQPVVDTQAL----------RVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIV 325 + +AYQP V V G+E L+RWRHP G I P FI AE +IV Sbjct: 396 ELLLAYQPQVRLSTDDAHDAVISRANVYGVEALVRWRHPEIGLIGPGEFIAVAEETGLIV 455 Query: 326 PLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIV 385 PL + + A + V ++ +N++ + ++ +L Q+ Sbjct: 456 PLGLWVLRTACQQAVRWMREDGVTLRVAVNLSARQTRDPALVENVMDVLRETGMPPHQLE 515 Query: 386 LEITERDMLKEQEA-TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFIN 444 LEITE ++++ EA L LH+ G+ ++IDDFGTG+S+L YL+RF + LKIDR F+ Sbjct: 516 LEITESVLMEDIEANIALLESLHAAGISLSIDDFGTGYSSLAYLQRFPIQKLKIDRSFVQ 575 Query: 445 AIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLD 504 + + + AV+ +A L M VAEGVE PEQ L + G + QGY SRP D Sbjct: 576 RMPGDGE--AIAGAVIAMAHSLRMQVVAEGVEDPEQLALLRDAGCDLGQGYLFSRPQQAD 633 Query: 505 DFVRWLKK 512 + WL + Sbjct: 634 ALMAWLNR 641 >UniRef50_A3JQI8 Sensory box protein n=2 Tax=Rhodobacterales RepID=A3JQI8_9RHOB Length = 908 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 93/338 (27%), Positives = 156/338 (46%), Gaps = 19/338 (5%) Query: 194 LSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDW--------TWNDVWYAFLLGGM 245 S + ++ + L V LY +D + Y G Sbjct: 565 ASHIAENIIKSLAAPFYLSEKINFISGSLGVALYPNDAQNADNLIVNADQAMYMAKDAGR 624 Query: 246 SGTVVGLLCYYLMSV-RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHP 304 +G L + R+ ++ TA+ +QF V YQP+V+ ++ E LLRW+HP Sbjct: 625 NGFSYFTLALQEAAQTRLSLISDLRTALPGKQFAVHYQPIVELATGKIYKAEALLRWQHP 684 Query: 305 VAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHS- 363 G + P FI AE +I + +F R+ A ++ ++ +N++P Sbjct: 685 ERGPVSPADFIPVAEEAGLIHEIGDWVFHEAIRELAHWRELFEPELQISVNVSPVQFRES 744 Query: 364 --------ESFKADIQKLLTSLPAHHFQIVLEITERDMLK-EQEATQLFAWLHSVGVEIA 414 E FK + L L +V EITE ++ E T+ + GV++A Sbjct: 745 QGSDRRSLEGFKKNWLNALNGLGLPGESVVFEITEGVLVNAEASVTEKLIAMRDAGVQVA 804 Query: 415 IDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEG 474 +DDFGTG+S+L YL++F +DYLKID+ F+ + +T + +A++ +A +L + +AEG Sbjct: 805 LDDFGTGYSSLSYLKKFDIDYLKIDQSFVQNLQDDTDNQALCEAIIVMAHKLGLKVIAEG 864 Query: 475 VETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 VET Q L G ++ QG+ S+ +P D+F LK+ Sbjct: 865 VETEPQRDLLVGFGCDYAQGWLYSKAVPADEFEVLLKE 902 >UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF sensor n=2 Tax=Cyanobacteria RepID=B4B904_9CHRO Length = 1297 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 85/320 (26%), Positives = 152/320 (47%), Gaps = 9/320 (2%) Query: 197 FSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCY 255 FS +L+N + + G+ + + L D ++V M G Y Sbjct: 531 FSQKLLNDFQEPFYVQSQAIYLGVSIGIALAPYDGDSSEVLLKNAESAMYQAKQQGKNTY 590 Query: 256 YLMS-------VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGE 308 L ++ ++ AI+R +F + YQP ++ ++ G+E L+RW+HP G Sbjct: 591 QLYRPGSNQDFNKLILEADLRKAIERNEFVLHYQPQIELATGKLIGVEALIRWQHPCLGM 650 Query: 309 IPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKA 368 + P FI AE +I P+ + + ++ ++ +N++ L A Sbjct: 651 VSPALFIPLAEETGLICPIGEWALKTACHQYQIWQQAGLPKIQMAVNLSAFQLQQYDIVA 710 Query: 369 DIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIY 427 I K++ + + LEITE +++ E T + L +G++IAIDDFGTG+S+L Sbjct: 711 RIAKIIQETRINPRDLELEITETTVIQNLERMTSIIEQLKQMGIKIAIDDFGTGYSSLNV 770 Query: 428 LERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSER 487 L+ ++ LKID+ F+ + + + + A++ L K + +AEGVET +Q +L Sbjct: 771 LKHLPVNTLKIDKSFVQDLSNDPNDAKLCQAIIMLGKAFKLEVLAEGVETIKQLEFLKNC 830 Query: 488 GVNFMQGYWISRPLPLDDFV 507 G + QG+ ISRP+P D + Sbjct: 831 GCDHAQGFLISRPVPPDALL 850 >UniRef50_Q89HX5 Bll5864 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89HX5_BRAJA Length = 799 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 100/333 (30%), Positives = 148/333 (44%), Gaps = 14/333 (4%) Query: 191 NTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDW-----TWNDVWYAFLLGGM 245 A + RL+ V + G+ + + L D + A Sbjct: 465 EAAARCLAGRLVEVISAPYEIDDHQIVIGVSIGISLSPQDGSNADELLKNADLALYRAKA 524 Query: 246 SGTVVGLLCYYLMSVRMR----PGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRW 301 G M R + ++ A++R++F YQP+ D + RV E LLRW Sbjct: 525 DGRGTYRFFETGMDARAQARRLLEMDLRAALQRDEFQPYYQPIRDVASGRVVVFEALLRW 584 Query: 302 RHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHL 361 HP G I P FI AE +IV L + + DAA P V +N++P Sbjct: 585 NHPQRGLIAPINFIPLAEETGLIVQLGEFVLRSACTDAATW----PDDVDVAVNLSPVQF 640 Query: 362 HSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGT 420 + + A + LT ++ LEITE +L+ EAT L ++GV I++DDFGT Sbjct: 641 RNPNLIASVTAALTVSGLPARRLELEITESVLLQNSEATLTTLHELRAMGVRISLDDFGT 700 Query: 421 GHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQ 480 G+S+L YL F D +KIDR F++ + T + ++ AV L + L ++T AEGVE Q Sbjct: 701 GYSSLSYLRSFPFDKIKIDRSFVSELATREDSMAIIRAVTGLGRSLGIVTTAEGVENDAQ 760 Query: 481 ARWLSERGVNFMQGYWISRPLPLDDFVRWLKKP 513 L G QGY S+P P D L++P Sbjct: 761 LELLRREGCTQAQGYLFSKPRPASDVALMLERP 793 >UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium extorquens group RepID=B7KTV8_METC4 Length = 772 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 107/439 (24%), Positives = 191/439 (43%), Gaps = 29/439 (6%) Query: 86 RAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAI-LPGTPMVPNK 144 A +R L M L++ + D +++ L G V ++ Sbjct: 331 TATKDAELRIAHLAHHDALTGLPNRAFMSESLHQALRDPDRACLAVLSLDLDGFKAVNDR 390 Query: 145 PAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSS----- 199 Y +P + ++ L + + G ++ N A ++ S Sbjct: 391 ------YGHP--GGDALLTSVAERLQNEVSGGDIVARFGGDEFVVLNVAFTSPSEVEDLA 442 Query: 200 RLMNVNELTDMPVRETKIA-GIPLTVRLYADDWTWNDVWYAFLLGGMSGTVV---GLLCY 255 R + + T +P+ + G+ + + D + + G + Sbjct: 443 RRLIESLSTPVPLDNESVTIGVSIGIAFAPTDGRTAEELLKNADAALYRAKTAGRGTFRF 502 Query: 256 YL------MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEI 309 + + R R +++ A+ R++ + YQP V ++ ++G E LLRWRHP G I Sbjct: 503 FEPEMDRKLQARQRLVQDLRNALTRDELRLDYQPFVKSETGVISGCEALLRWRHPERGMI 562 Query: 310 PPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKAD 369 P FI AE +IVP+ + + R+AA P + +N++P S Sbjct: 563 SPVEFIPLAEESGLIVPIGMWVIQQACREAASW----PSTYRISVNVSPVQFRSRDLPQV 618 Query: 370 IQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYL 428 I LTS ++ +E+TE ++ + + A ++ + S+GV +A+DDFGTG+S+L YL Sbjct: 619 ILAALTSSGLAPARLEVEVTEAVLIDDADTALEILRQIRSLGVRVALDDFGTGYSSLSYL 678 Query: 429 ERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERG 488 RF D +KIDR F+ + T + ++ A+ +A+ L M AEGVET +QA+ L + G Sbjct: 679 RRFPFDKIKIDRSFVQELDTRHDSQVIVQAIRDMAQGLGMTVTAEGVETDDQAKRLRQTG 738 Query: 489 VNFMQGYWISRPLPLDDFV 507 +QG+ SRP P ++ Sbjct: 739 CEELQGFLYSRPRPANELT 757 >UniRef50_Q4KBF3 Response regulator/GGDEF domain/EAL domain protein n=3 Tax=Pseudomonas fluorescens RepID=Q4KBF3_PSEF5 Length = 641 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 101/360 (28%), Positives = 165/360 (45%), Gaps = 15/360 (4%) Query: 171 PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADD 230 SLF E + + + +L+ D L + LY +D Sbjct: 278 DSLFRYGSDEFVVVLHDQQHPAQIRALAQKLLATVSQFDDIAGHDLQVTASLGISLYPED 337 Query: 231 WTWNDVWYAFLLGGMSGTVV-----GLLCYYL--MSVRMR----PGREIMTAIKREQFYV 279 D M+ G C++ M+ R R I+ A++R +F++ Sbjct: 338 G--QDALALIKKAEMAMRTSKEQAPGSYCFFTDDMTHRAREQQYLESGILQALERREFHL 395 Query: 280 AYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDA 339 YQP + + V G E L+RW+ P G I P+ FI AE +I ++Q + R Sbjct: 396 HYQPKIHLASGNVVGAEALIRWQRPQQGWISPELFIPVAEDSGLITRISQWVLGEATRQC 455 Query: 340 AELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEA 399 + V IN++ ++ L+ + LEITE +L+ E Sbjct: 456 RAWQNAGLPPVPLSINLSAADFRQPQLLQQLRDALSDNALDPAWLELEITEGVLLQNVEV 515 Query: 400 T-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDA 458 T + ++GV +A+DDFGTG+S+L YL +F +D LKID+ FI+ + E + ++ A Sbjct: 516 TLATLLAIKALGVRLAVDDFGTGYSSLSYLRKFPVDVLKIDQSFIHGLSHEHKDAVLVSA 575 Query: 459 VLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQW 518 ++ L + LN+ +AEGVET +Q +L ++G QGY+ S+ LP +DF R L K + PQ+ Sbjct: 576 IINLGRSLNLKVIAEGVETHQQLTFLQQQGCEEAQGYYFSKALPAEDFARLLGK-HRPQF 634 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 89/328 (27%), Positives = 151/328 (46%), Gaps = 11/328 (3%) Query: 193 ALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVG 251 A + S +++ + + ++ + + LY +D D F M +G Sbjct: 1176 AATLISEKVLRAFQTPFLLEDKSLTISTSIGISLYPNDADNADSLIKFADTAMYHAKSLG 1235 Query: 252 LLCYYLMSVRMR--------PGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRH 303 + + ++ + AI R + + YQP + +TGLE LLRW H Sbjct: 1236 RNNFQFYTHKLNEIATRHVLLEAGLKQAIHRNELSLVYQPKFSLRDGSLTGLEALLRWHH 1295 Query: 304 PVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHS 363 G I P FI AE +I + + + AE + + +N++ L Sbjct: 1296 TELGPISPVEFIPLAEETGIINQIGHWVINHACQQLAEWNALGFNNISMAVNLSARQLK- 1354 Query: 364 ESFKADIQKLLTSLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGH 422 + I+ L + LE+TE ++ Q++ + + L ++G+ IAIDDFGTG+ Sbjct: 1355 ADIISTIEVALAVSGLPAQSLELELTESMIMGNPQDSVSILSKLKALGLTIAIDDFGTGY 1414 Query: 423 SALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQAR 482 S+L YL+RF +D LKIDR F+ I + + + A++ LA L + VAEGVET Q Sbjct: 1415 SSLSYLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNVVAEGVETQAQLN 1474 Query: 483 WLSERGVNFMQGYWISRPLPLDDFVRWL 510 +L +G + +QG+ +S+PL D + L Sbjct: 1475 FLGLQGCDEVQGFLLSKPLSAKDCLTLL 1502 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 399 bits (1027), Expect = e-110, Method: Composition-based stats. Identities = 76/258 (29%), Positives = 138/258 (53%), Gaps = 1/258 (0%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 ++ +E+ A++ E+F + +QP V+ ++ +E L+RW HP G + PD+FI+ AE Sbjct: 378 QLLMEQELRHALQFEEFTLGFQPQVNLTTGKIVSVEALIRWHHPSKGLVMPDSFISVAEE 437 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +I P+ + + + L+ + +K +N++ + I++ L Sbjct: 438 TGLINPIGRWVLKNACMQMKMLQDLTGSAIKIAVNLSARQFDDPKLEQSIEEALNETGLE 497 Query: 381 HFQIVLEITERDMLKEQEA-TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 + LE+TE ++ + +A T L GV +AIDDFG+G+S+L YL++ ++ LK+D Sbjct: 498 PEWLELEVTESMLMGDIQAVTNKLKRLRQTGVSLAIDDFGSGYSSLSYLKKLPVNALKVD 557 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 R F+ I ++ + A++ +A +L + VAEGVET EQ +L +F QGY+ S+ Sbjct: 558 REFVRDIPEDSNDMEITSAIIAVAHKLQLKVVAEGVETAEQKEYLLANQCDFAQGYFFSK 617 Query: 500 PLPLDDFVRWLKKPYTPQ 517 PL +D +L + Q Sbjct: 618 PLSFEDLYIYLNEHKFKQ 635 >UniRef50_C6XBI7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBI7_METSD Length = 681 Score = 399 bits (1027), Expect = e-110, Method: Composition-based stats. Identities = 99/330 (30%), Positives = 155/330 (46%), Gaps = 10/330 (3%) Query: 191 NTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSG--- 247 ++ + +++ + + L + Y D D + + Sbjct: 351 PENITRVADKVLQAFDQPFVVDGHDVFVTASLGIAAYPSDSQAVDDLLKYADSALFHAKH 410 Query: 248 TVVGLLCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRW 301 +Y + R + A+K+E+F + YQP+VD + G E LLRW Sbjct: 411 LGRNNFQFYSADLTIKAAERREVETNLRFALKKEEFLLHYQPLVDLATREIIGAEALLRW 470 Query: 302 RHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHL 361 +H I PD FI AE +I+P+ + + + A L + P V +N++ Sbjct: 471 QHESGKLIMPDKFIGIAEETGLIIPIGEWVMRSACQVAVALNRGRPRPVTVAVNLSTRQF 530 Query: 362 HSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQ-LFAWLHSVGVEIAIDDFGT 420 + IQ +L H I LEITE +L+ + Q + L ++G+ I+IDDFGT Sbjct: 531 LHNDLVSSIQAILAETGCHTDWIKLEITESLLLENTDNIQRMLQSLSAMGLCISIDDFGT 590 Query: 421 GHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQ 480 G+SAL YL RF + LKIDR F + I + ++ A+++LA+ LN VAEGVET EQ Sbjct: 591 GYSALSYLHRFPVRELKIDRSFTSDITDNAERALIVQAIVSLARNLNKNVVAEGVETLEQ 650 Query: 481 ARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 A +L + G QGY S+PLPL+ F+ L Sbjct: 651 ADYLHKMGCPQAQGYLFSKPLPLEQFLALL 680 >UniRef50_A1AMG1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AMG1_PELPD Length = 718 Score = 399 bits (1027), Expect = e-110, Method: Composition-based stats. Identities = 97/362 (26%), Positives = 157/362 (43%), Gaps = 23/362 (6%) Query: 178 RQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPL-------------TV 224 +E D + +G + + + R + P + Sbjct: 346 SEEQRDSLIARLGGDEFTILLEGITTPEAAARVARRVIEALEAPFALNGNEVFISCSIGI 405 Query: 225 RLYADDWTWNDVWYAFLLGGMS---GTVVGLLCYYLMSV------RMRPGREIMTAIKRE 275 +Y D T ++ M +Y + R+ + A ++E Sbjct: 406 SIYPHDGTDLEILVKNADVAMYCAKDLGCSTFQFYTQEMNSVSLQRLILETHLRKAFEKE 465 Query: 276 QFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELI 335 +F++ YQP +D R+ GLE L RW +P G + P +FI AE +I+ L + + + Sbjct: 466 EFFLHYQPQIDCVTNRIIGLEALARWNNPELGLVSPGSFIPLAEETGLIIALDRWVLATV 525 Query: 336 ARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLK 395 + + V+ +N++ H + IQ++ + A + LEITE +++ Sbjct: 526 CKQLEAWQAAGIPLVRVAVNLSARHFLKANLNKTIQQIRSRGAAARDHLDLEITEGMLME 585 Query: 396 E-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSP 454 +E + L GV I+IDDFGTG+S+L YL R LKIDR FI+ G ++ Sbjct: 586 NAEEVVSVLGMLQETGVNISIDDFGTGYSSLSYLTRLPFHTLKIDRSFISQSGDNVESAS 645 Query: 455 VLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPY 514 V+ A++ LA L VAEGVET Q ++L E G +QGY SRPLP D L++ Sbjct: 646 VVTAIIALAHSLGKEVVAEGVETSTQLQFLKENGCRVIQGYLFSRPLPEDKIRELLREGR 705 Query: 515 TP 516 P Sbjct: 706 IP 707 >UniRef50_B1XQ65 Sensory box/GGDEF family protein n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XQ65_SYNP2 Length = 570 Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 86/256 (33%), Positives = 138/256 (53%), Gaps = 1/256 (0%) Query: 258 MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 + R + R++ A++RE+ + YQP +D + +TG E LLRWRH G I P FI Sbjct: 310 LRSRFQLERDLYRALEREELELFYQPQIDVKTGNITGAEALLRWRHHEHGFISPGIFIPI 369 Query: 318 AESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSL 377 AE+ +I+ ++ + + + K + +N++ D+ K+L Sbjct: 370 AEASDLIINISDWVLKTACYQNQQWTKDGFPELCVAVNLSGKQFQQPQLVDDVSKILKET 429 Query: 378 PAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYL 436 Q+ LEITE ++ Q A + LH++G+ A+DDFGTG S+L YL+RF+LDYL Sbjct: 430 SLKPSQLELEITEGLLINNIQNAVKTLEDLHNLGLITALDDFGTGFSSLSYLKRFSLDYL 489 Query: 437 KIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYW 496 KID+ F+ I + + ++++ LA L + +AEGVET EQ +L G N +QGY+ Sbjct: 490 KIDQSFVRGIPLDKDDVAITNSIIALAHSLQIEVIAEGVETIEQVNYLKSVGCNKLQGYY 549 Query: 497 ISRPLPLDDFVRWLKK 512 SRP+ DF ++ Sbjct: 550 YSRPICAKDFAELWEQ 565 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 85/308 (27%), Positives = 148/308 (48%), Gaps = 6/308 (1%) Query: 214 ETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLL---CYYLMSVRMRPGREIMT 270 E I + T A D D A G + + + + ++ Sbjct: 519 EASIGIVLHTRDYAAADDLLRDADIAMYRAKEQGRASMIFDRKMHQEILEAISLETDLRQ 578 Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 A++ + + YQP+VD + R+ G E L+RW HP G +PP FI AE +I+PL + Sbjct: 579 ALEAGELLLHYQPIVDVKDSRIVGFEALVRWDHPDRGLVPPGQFIPLAEETGLILPLGRF 638 Query: 331 LFELIARDAAELEKVLP--VGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + R + +P + +N++ + + ++L + + LEI Sbjct: 639 VIDEACRQLRAWQLEMPEAADLSVSVNVSCRQFVKDGLVEHVAQVLAATGLPPACLKLEI 698 Query: 389 TERDMLKEQEATQL-FAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE ++ + E T L ++GV+IAIDDFGTG+S+L YL + +D+LKIDR FI+ G Sbjct: 699 TESVLMHDAEHTARELNRLKALGVKIAIDDFGTGYSSLSYLRQLPIDHLKIDRSFISGQG 758 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + + ++ ++++LA+ L + +AEGVE P+Q L + QG+ SRP+ Sbjct: 759 CDGESQEIVKSIISLARSLGLTVIAEGVECPDQLDRLRLADCDKAQGFMFSRPVEATAAG 818 Query: 508 RWLKKPYT 515 R +++ Sbjct: 819 RLIRQHPA 826 >UniRef50_B2JUP6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Burkholderiaceae RepID=B2JUP6_BURP8 Length = 980 Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 94/307 (30%), Positives = 148/307 (48%), Gaps = 11/307 (3%) Query: 215 TKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGL---LCYYL------MSVRMRPG 265 + V +Y DD DV + M L Y+ R+R Sbjct: 663 EAFISASIGVTVYPDDARELDVLFKNADQAMYAAKNAGRNRLNYFTPDLQVAAEKRLRLT 722 Query: 266 REIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIV 325 ++ TA+ +QF + YQP+VD + E L+RW HP G + P FI AE +IV Sbjct: 723 SDLRTALPHDQFRLYYQPIVDLSTGDIFKAEALIRWLHPERGMVSPLDFIPLAEDTGLIV 782 Query: 326 PLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSES-FKADIQKLLTSLPAHHFQI 384 P+ + +F + A + + +N++P + ++ A LT I Sbjct: 783 PIGEWVFRQAVQQAKLWRQRFHPSFQISVNMSPVQIRQDNQLGALWSDYLTREGMPGQSI 842 Query: 385 VLEITERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFI 443 +EITE +L + A G+ I+IDDFGTG+S+L YL+RF +D+LKIDR F+ Sbjct: 843 AIEITEGLLLHADLNIDARLATFRHAGIRISIDDFGTGYSSLAYLKRFDIDFLKIDRSFV 902 Query: 444 NAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPL 503 +G + + +A++ LA +L + +AEGVET EQ +L+ G +F QG+ S+P+P Sbjct: 903 QNLGFDADNQALCEAMVVLAHKLGLKVIAEGVETVEQRDFLTAVGCDFAQGFLYSQPVPP 962 Query: 504 DDFVRWL 510 D F + Sbjct: 963 DQFETLV 969 >UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Pseudomonas RepID=A4Y0Z3_PSEMY Length = 960 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 88/329 (26%), Positives = 153/329 (46%), Gaps = 10/329 (3%) Query: 193 ALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFL-LGGMSGTVVG 251 +L+ +SRL+ L + L + L D + + +G Sbjct: 624 SLARVASRLLAKLRLPMDVGGHELVVSASLGISLLPDYAREIGALISQANMAVQHAKHLG 683 Query: 252 LLCYYLMS--------VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRH 303 + + R++ ++ AI+ Q V YQP ++ ++ E L+RWRH Sbjct: 684 GNTFQFFTDNLQACTLERLQLENQLRKAIEEGQLEVFYQPKLNLADDQLNAAEALVRWRH 743 Query: 304 PVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHS 363 P G + P FI AE +I P+ + + R A + ++ ++ +NI+ L Sbjct: 744 PQQGLVAPGEFIGLAEETGLIAPIGEFVLRQACRQARQWQQQGLAEIRVSVNISVYQLRQ 803 Query: 364 ESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGH 422 + + ++++L + LE+TE +L + F L +GV++AIDDFGTG+ Sbjct: 804 GNLTSLVRQVLEETGLAPQYLELELTESQLLDNVDSVVVTFRQLRELGVKLAIDDFGTGY 863 Query: 423 SALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQAR 482 S+L YL+RF + Y+KID+ FI + + + A++ +A L + VAEGVET Q Sbjct: 864 SSLSYLKRFPVHYVKIDQTFIRDLSPGGEDAAITRAIIAMAHSLELKVVAEGVETQAQMD 923 Query: 483 WLSERGVNFMQGYWISRPLPLDDFVRWLK 511 +L + + +QGY ISRP+ F L+ Sbjct: 924 FLKSQNCDEIQGYLISRPVEAAAFAELLR 952 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 95/365 (26%), Positives = 155/365 (42%), Gaps = 10/365 (2%) Query: 150 WYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTD 209 + LLKN L ++ E + L +S++++ Sbjct: 719 HIGDTLLKNVASRLTETLRSNDTIARLGGDEFMIILPLKANEALAGKLASKILDALRPPI 778 Query: 210 MPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS---GTVVGLLCYYLMSVR----- 261 + + Y +D + M CY+ + Sbjct: 779 RIDGHELFVTPSIGICFYPNDGVTVNALMRNADTAMYQAKANGRNTYCYFTAEMNAAADN 838 Query: 262 -MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 + ++ A+ R +F V YQPV+D + R+T E L+RWRHP G + P FI AE Sbjct: 839 YFQIESDLRRAVDRNEFEVFYQPVIDLKTHRITSYEALVRWRHPTKGLVGPAQFITVAEE 898 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +I + + +N++P + + I ++L Sbjct: 899 SGLIGEIGTIVLRQACSQLRSWIDEGFTSPILALNLSPIQFNDPNLTEGICRILRDYDLT 958 Query: 381 HFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 +I LEITE ++++ E A L S G ++IDDFGTG+S+L YL+RF +D LKID Sbjct: 959 PDRIELEITETVIMQDGELALGTLQNLSSRGFRLSIDDFGTGYSSLAYLKRFPVDTLKID 1018 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 R FI + ++ A++ LA L++ +AEGVET EQ LS NF QGY++++ Sbjct: 1019 RSFITDMTANENDRAIVTAIMALANSLHLSVIAEGVETKEQYDLLSALNCNFAQGYYMAK 1078 Query: 500 PLPLD 504 P+P + Sbjct: 1079 PMPAE 1083 >UniRef50_A8MJT4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MJT4_ALKOO Length = 504 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 82/255 (32%), Positives = 132/255 (51%), Gaps = 3/255 (1%) Query: 258 MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 M+ ++ + A+++++F + YQP +D++ + GLE LLRW++P G + P FI Sbjct: 249 MNRKLELINNLHKALEKKEFELYYQPQIDSETNEIVGLEALLRWQNPTLGRVSPAEFIPV 308 Query: 318 AESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSL 377 AE +I+P+ + + A +K + +NI+ + F + +L Sbjct: 309 AEETGLIIPIGDWVLKTACAQNATWQKEGYKPIPVSVNISTIQFNEPLFVDKVVTILKET 368 Query: 378 PAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYL 436 + + LEITE + + + L +GV+IA+DDFGTG S+L YL +F ++ L Sbjct: 369 TLNPKWLHLEITESVAINDATLTINVLNRLQKIGVKIALDDFGTGFSSLGYLSKFKINVL 428 Query: 437 KIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYW 496 KID F+ IG + S + ++ L K LNM VAEGVET EQ +L G + +QGY Sbjct: 429 KIDSSFVQDIGEDE--STITKTIIVLGKNLNMEVVAEGVETNEQLDYLKNAGCDIIQGYL 486 Query: 497 ISRPLPLDDFVRWLK 511 S PLP + K Sbjct: 487 FSSPLPAGQIEKMFK 501 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 91/331 (27%), Positives = 149/331 (45%), Gaps = 10/331 (3%) Query: 188 IIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDW-----TWNDVWYAFLL 242 + G +T + R++ + + V +Y DD A Sbjct: 519 LSGPDEAATMARRMVAELRRPVNVEGRELVVTTSVGVAVYPDDSRDADTLVKHADVAMYR 578 Query: 243 GGMSGTVVGLLCYYLMSVR----MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVL 298 G L M+ R + + A+ R++ + +QPV+ + + +E L Sbjct: 579 AKDEGRNSFQLFEPAMNARSLERLALETALHRALPRDELQLYFQPVMKAEGGELVAVEAL 638 Query: 299 LRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAP 358 LRWRHP G + P FI AE +IVP+ + + + + +NI+ Sbjct: 639 LRWRHPDLGLVSPADFIPLAEDTGLIVPIGEWVLRSACEHHRRWCEAGGAPLHMMVNISA 698 Query: 359 DHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDD 417 E F A + +L + LE+TE ++ + + A L ++GV +AIDD Sbjct: 699 RQFREEGFAAMVGSVLAETGMTPGDLTLELTESMLMDDTDRALARLDHLRALGVCLAIDD 758 Query: 418 FGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVET 477 FGTG+S+L YL+RF +D LKIDR F+ I T + ++ A+++L L + VAEGVET Sbjct: 759 FGTGYSSLAYLKRFPIDELKIDRLFVRGIDRNTRDAALVSAIVSLGHSLGLRVVAEGVET 818 Query: 478 PEQARWLSERGVNFMQGYWISRPLPLDDFVR 508 L +G + QG+ S PLP ++FV+ Sbjct: 819 AAHLDVLRRQGCDLAQGFHFSPPLPWEEFVK 849 >UniRef50_B8GL67 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GL67_THISH Length = 685 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 97/336 (28%), Positives = 151/336 (44%), Gaps = 14/336 (4%) Query: 188 IIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSG 247 + G + + +L++ + + LY D M Sbjct: 341 LTGKAHVEEIAQKLISRVAEPYYLREGVAHISASIGITLYPGDAEDMGELMKHADQAMYS 400 Query: 248 ---TVVGLLCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVL 298 CY+ ++ R+R RE+ A+ + QF +QP+V+ + R+ E L Sbjct: 401 AKRLGRNRFCYFTHALQEAAQKRLRLSRELRQAVNQGQFEAHFQPIVELASGRIQKAEAL 460 Query: 299 LRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAP 358 LRW HP G + P FI AE +I + +F R A ++ +N++P Sbjct: 461 LRWHHPERGLVGPAEFIPLAEDTGLIEGVGDWVFREAVRRARVWRDRFGTDIQVSVNMSP 520 Query: 359 DHLHSESFKADIQKLL---TSLPAHHFQIVLEITERDMLK-EQEATQLFAWLHSVGVEIA 414 SE ++ L + QIV+EITE +L E T+ G++IA Sbjct: 521 LQFRSEG-AERVESWLYHLEEMGVRGEQIVIEITENLLLHAHDEVTRQLFRFRDAGIQIA 579 Query: 415 IDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEG 474 IDDFGTG+ L YL++F +DYLKIDR F+ + + + A++ +A L + +AEG Sbjct: 580 IDDFGTGYCTLSYLKQFPIDYLKIDRSFVRNLENDPNDVALSKAIIVMAHELGLKVIAEG 639 Query: 475 VETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 VET Q R LS+ G +F QGY +R LP +DF L Sbjct: 640 VETEGQRRLLSDAGCDFAQGYLFARALPAEDFEDLL 675 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 80/257 (31%), Positives = 135/257 (52%), Gaps = 1/257 (0%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R G ++ A++R + + YQPV+D + + G+E LLRWRHP I PD FIN AE Sbjct: 624 RHILGLDLRYALERNELLLYYQPVMDMPSHNLYGVEALLRWRHPEQKLITPDKFINLAEE 683 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +I+P+ + + + ++ + IN++ + +I ++L+ Sbjct: 684 TGLIIPIGEWVIRTVCLQIKAWQEQGFYVPRVAINLSARQFRDKDLIKNISRILSETGVK 743 Query: 381 HFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 I LEITE ++ E + L ++G+ I+IDDFGTG+S+L YL++F + LKID Sbjct: 744 AKHIALEITESMLIDNIEKVVETLNRLDAMGLHISIDDFGTGYSSLSYLKQFPIHTLKID 803 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 R F+ + T+ ++ A++ +A L M +AEG+E EQ +L + N QGY+ S+ Sbjct: 804 RSFVRDLVTDKNDRTIVAAIIAMAHSLEMEVIAEGIEIEEQLDFLVTQKCNHYQGYYFSK 863 Query: 500 PLPLDDFVRWLKKPYTP 516 P+ + + L T Sbjct: 864 PVTVSEIELMLMNSVTQ 880 >UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPG4_9GAMM Length = 862 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 89/302 (29%), Positives = 149/302 (49%), Gaps = 11/302 (3%) Query: 221 PLTVRLYADDWTWNDVWYAFLLGGMS---------GTVVGLLCYYLMSVRMRPGREIMTA 271 + V + +D +++ M + +S R E+ A Sbjct: 562 SIGVSFFPEDGDNSEILLRNADSAMYEAKRNGRNGYRLYTSAMTEEISERFALTEELREA 621 Query: 272 IKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHL 331 I RE+ + +QP VD + + G E LLRW HP G IPPD FI AES ++ + + Sbjct: 622 ISREELELYFQPQVDIRTGSILGAEALLRWNHPQRGMIPPDRFIPIAESSGQMIKIGAWV 681 Query: 332 FELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITER 391 E + A ++ V K +NI+ ++ E I +LL S + LEITE Sbjct: 682 LEQVCAKVAGWKERGIVAPKIAVNISNQQMNRE-LVEQITELLASSKCDPACLELEITES 740 Query: 392 DMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTET 450 +++ E + L ++GV IAIDDFGTG+S+L YL++ ++ LK+DR F++ + + Sbjct: 741 CLMENPEQMAHELSSLKALGVGIAIDDFGTGYSSLSYLKQLPINKLKVDRSFVSDLQDDE 800 Query: 451 ITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 + A++ + + +N+ +AEG+ET EQ L + QGY+ S+PLP + F+ +L Sbjct: 801 NDLAITRAIVAMGQSMNLNVIAEGIETQEQIDLLLKLECFEGQGYFYSKPLPEEQFLAYL 860 Query: 511 KK 512 + Sbjct: 861 DQ 862 >UniRef50_C1D1W4 Putative diguanylate-cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D1W4_DEIDV Length = 856 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 90/309 (29%), Positives = 149/309 (48%), Gaps = 7/309 (2%) Query: 211 PVRETKIAGIPLTVRLYADDWTW-NDVWYAFLLGGMSGTVVGLLCYYL---MSVRMRPGR 266 GI ++ + D T A + + L +R++ Sbjct: 543 AFHLGASIGISVSPQAGRDGQTLLRHADLAMYRAKREKSGFAVFEAQLNQQAQLRLQLAS 602 Query: 267 EIMTAIKR--EQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMI 324 ++ A++ + YQP V +V G E L+RWRHP G + P FI AE MI Sbjct: 603 DLREALREPGANLELHYQPQVRLHDGQVVGAEALVRWRHPHLGMVSPAQFIPVAEDTGMI 662 Query: 325 VPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQI 384 VPL + E R A ++ +N++ F + L + ++ Sbjct: 663 VPLGTWVMEEACRQAVAWAAAGHGAMRVAVNVSALQFARPDFVDTVSATLRATGLEAGRL 722 Query: 385 VLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFI 443 +E+TE ++++ +E+ + L ++GV +A+DDFGTG+S+L YL+R L+ LKIDR FI Sbjct: 723 EVELTESAVMEDVKESVERMERLRALGVSVAVDDFGTGYSSLSYLQRLPLNVLKIDRTFI 782 Query: 444 NAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPL 503 +G + V+ A++ LA+ LN+ VAEGVETP++ L E G + QG++ ++PLP Sbjct: 783 QNLGVNATSRSVVQAIVGLAQHLNLECVAEGVETPDEREALIEVGCRYAQGFFFAKPLPA 842 Query: 504 DDFVRWLKK 512 + WL + Sbjct: 843 PALLEWLSQ 851 >UniRef50_C6P3H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H7_9PROT Length = 912 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 90/345 (26%), Positives = 158/345 (45%), Gaps = 15/345 (4%) Query: 181 DYDGVALIIGN----TALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDV 236 D AL++G ++ + ++N E + + V +Y D T + Sbjct: 559 GGDEFALLLGELSDQDSIERVNECILNKFSAPFQLGNELAYISVSIGVTIYPSDATEIEA 618 Query: 237 WYAFLLGGMSGTVVGL---LCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDT 287 M CYY ++ RM ++ A+ ++QF + YQP+V+ Sbjct: 619 LLRNADQAMYAAKNSGRNRSCYYTQAMQSVAQNRMSLSNDLHKALAQDQFRLVYQPIVEL 678 Query: 288 QALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLP 347 + + E L+RW+HP G + P FI AE +I+ + +F A Sbjct: 679 ETGSIHKAEALIRWQHPNRGLVSPADFIPIAEQSGLIIQIGDWVFRQAANQVKHWRGAYG 738 Query: 348 VGVKFGINIAPDHLHSESFKAD-IQKLLTSLPAHHFQIVLEITERDMLKEQEAT-QLFAW 405 ++ IN +P S+S + L L +EITE ++ + Sbjct: 739 KDIQISINKSPVQFKSDSNTHLAWFEHLKELDLSGGCFAIEITESLLMDASDTIVSKLMA 798 Query: 406 LHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKR 465 ++G+++A+DDFGTG+S+L YL++F +DY+KID+ F+ + ++ + +A++ +A + Sbjct: 799 FGNIGMQVALDDFGTGYSSLSYLKKFDIDYIKIDQSFVRNLAPDSSDLALCEAMIMMAHK 858 Query: 466 LNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 L + +AEGVET EQ L G ++ QGY SRPL +DF + Sbjct: 859 LGIKVIAEGVETSEQRDLLRTAGCDYGQGYLFSRPLSTEDFEGLV 903 >UniRef50_D2SGK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SGK4_9ACTO Length = 898 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 100/330 (30%), Positives = 151/330 (45%), Gaps = 9/330 (2%) Query: 196 TFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADD-WTWNDVWYAFLLGGMSGTVVGLLC 254 + L +L V T GI ++ D D A +G + Sbjct: 552 RLAGALAEPFDLAGDEVFVTASIGIAVSSGTGGDAHGLLRDADAAMYRAKEAGRARHEVF 611 Query: 255 YYLMS----VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIP 310 +M R+ ++ A++R QF + +QP +D + + G+E LLRW HP G IP Sbjct: 612 DSVMRAGAIRRLEIVNDLHRALERNQFVLHFQPQIDLRTNSLIGVEALLRWVHPERGLIP 671 Query: 311 PDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLP--VGVKFGINIAPDHLHSESFKA 368 P FI AE +I L + + + P + +N++ LH Sbjct: 672 PLEFIPVAEETGLINDLGRWVLRAACQQGRTWLDRFPDREPLVMSVNLSGRQLHQPRLAE 731 Query: 369 DIQKLLTSLPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIY 427 ++ L Q+VLEITE ++ + AT L +GV +AIDDFGTG+S+L Y Sbjct: 732 EVAAALEDSGFPADQLVLEITESVLMNDTAATIHTLEALKELGVRLAIDDFGTGYSSLTY 791 Query: 428 LERFTLDYLKIDRGFINAIGT-ETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSE 486 L+RF +D LKID+ F++ +G+ S V ++ LAK L + TVAEGVE E R L Sbjct: 792 LQRFPIDILKIDKSFVDGLGSANIEESAVTRTIVALAKTLRLETVAEGVERSEHVRELQS 851 Query: 487 RGVNFMQGYWISRPLPLDDFVRWLKKPYTP 516 + QGY+ +RPL + +P TP Sbjct: 852 LHCDIGQGYFFARPLDAGALTTLMAQPDTP 881 >UniRef50_C6CKZ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Dickeya RepID=C6CKZ2_DICZE Length = 689 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 93/308 (30%), Positives = 146/308 (47%), Gaps = 13/308 (4%) Query: 214 ETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV-VGLLCYYLM--------SVRMRP 264 E+ + + + L+ +D + + M G C+ R+R Sbjct: 372 ESMLVSASIGIALFPNDSDTLEELFKNADQAMYAAKSAGRNCFNYYTPALHQAARARLRL 431 Query: 265 GREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMI 324 ++ TAI+ QF V YQP+++ +V E L+RWRHP+ G I P FI AE +I Sbjct: 432 TNDLRTAIQCGQFEVYYQPIIELSTNKVVKAEALVRWRHPIRGMISPAEFIPLAEDTGLI 491 Query: 325 VPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKA-DIQKLLTSLPAHHFQ 383 VPL + A+ K+ + IN +P L S+ F + L Sbjct: 492 VPLGDWVARQAITQLAQWRKIFDPHFQVAINQSPVQLRSKDFTEMTWVQELAQHGLEGNA 551 Query: 384 IVLEITERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGF 442 +++EITE +L E G++IAIDDFGTG+S+L YL +F +D LKIDR F Sbjct: 552 VIIEITEGLLLNAESRVNDNLHLFRDTGIQIAIDDFGTGYSSLAYLRKFDIDCLKIDRSF 611 Query: 443 INAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 + + + + + A++ +A L + VAEGVET +Q L+ G ++ QG+ SRP+P Sbjct: 612 VEDL--DGVGFELCVAIIAMAHSLGLKVVAEGVETQQQCDTLARIGCDYAQGFLFSRPVP 669 Query: 503 LDDFVRWL 510 + L Sbjct: 670 APELTILL 677 >UniRef50_Q8DL70 Tll0627 protein n=2 Tax=Chroococcales RepID=Q8DL70_THEEB Length = 845 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 93/285 (32%), Positives = 151/285 (52%), Gaps = 3/285 (1%) Query: 235 DVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTG 294 ++ A LG V + M+ E+ A +RE+F V YQP+VD L++ G Sbjct: 542 AMYRAKSLGKARYEVFSMTMRAQTIALMQMETELRRAAEREEFLVYYQPIVDLATLKMVG 601 Query: 295 LEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVG--VKF 352 E LLRW+HP G I P F+ AE +I+P++ + R + P ++ Sbjct: 602 FETLLRWQHPERGIISPGEFMAVAEETGLILPISWWVMAEACRQMQRWAVIFPRSRKLRI 661 Query: 353 GINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGV 411 G+N++ H +++ +L ++ LE+TE ++ +E A + ++G+ Sbjct: 662 GVNLSGRHFQQADLLPNLRSILAETGFPAQRLCLEVTEGILIDNKEVAIATLEEIRAMGI 721 Query: 412 EIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTV 471 +++DDFGTG+S+L YL RF +D LKIDR FI+A+ +E ++ ++ A+L LA L + V Sbjct: 722 GVSMDDFGTGYSSLSYLHRFPIDTLKIDRTFISALNSEESSATIVHAILMLAHSLRLQVV 781 Query: 472 AEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTP 516 AEG+ET EQ R L G N+ QGY+ +RPL + L + P Sbjct: 782 AEGIETREQYRALQALGCNYGQGYFFARPLSARQVEKLLARQSLP 826 >UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L753_EXISA Length = 819 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 83/324 (25%), Positives = 140/324 (43%), Gaps = 9/324 (2%) Query: 198 SSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS---GTVVGLLC 254 + L+NV E G + + L+ D + M Sbjct: 489 AQELINVLHPPFELENEEVFTGASIGISLHPSDGDTAEELIKNADIAMYRAKADGKNGYQ 548 Query: 255 YYL------MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGE 308 ++ +S R + I R +F V YQP + + V G+E L+RW HP G Sbjct: 549 FFTNELNESVSRRSNLSMALRKGIGRGEFTVHYQPQIQLETEMVIGMEALVRWNHPELGM 608 Query: 309 IPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKA 368 I P FI AE I L + + R + + +NI+ + Sbjct: 609 ISPGEFIPIAEETGSIHRLGEFVLNEACRQNKAWQDASIPPFRVAVNISAVQFAQKDLPE 668 Query: 369 DIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYL 428 + + L + + LE+TE + A + L ++GV ++IDDFGTG+S+L YL Sbjct: 669 VVSRALAASGLEAQYLELELTESVIQSADRAIETMHELVALGVHLSIDDFGTGYSSLSYL 728 Query: 429 ERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERG 488 + F +D LKID+ F I ++ + ++ ++ +A L++ +AEGVET Q +L Sbjct: 729 KLFPIDTLKIDQHFTKNIESDEKDAALVKTIIRMAHELDLNVIAEGVETENQVAFLKAES 788 Query: 489 VNFMQGYWISRPLPLDDFVRWLKK 512 N QGY+ +RPLP ++ + ++ Sbjct: 789 CNQAQGYFYNRPLPAEEIEVFFQQ 812 >UniRef50_B6BGL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGL3_9PROT Length = 671 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 87/348 (25%), Positives = 158/348 (45%), Gaps = 13/348 (3%) Query: 175 YSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGI---PLTVRLYADD- 230 SR + V L + T ++ ++E+ P + + +Y DD Sbjct: 318 MLSRFGGDEFVFLFSNVQSELTIEKTMIKIHEVLKKPFILNTYEVYTTASIGIAIYPDDA 377 Query: 231 ----WTWNDVWYAFLLGGMSGTVVGLL----CYYLMSVRMRPGREIMTAIKREQFYVAYQ 282 + A SG L S R+ E+ A++ + ++ +Q Sbjct: 378 QDAELLLRNADVAMYDAKQSGRSKYSFFNADMLNLSSNRLMLESELHKALENNELFLLFQ 437 Query: 283 PVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAEL 342 P V ++ G+E L+RW+HP G I P FI AE+ +I+P+ + + + A Sbjct: 438 PQVSLWNEKIVGVEALIRWQHPTKGLISPLDFIPIAENSGLIMPIGEWIIDQACDQLALW 497 Query: 343 EKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKE-QEATQ 401 + IN++ + + + I+ + + LEITE +++ E + Sbjct: 498 KDTHMSEATLSINVSAKQVLHQDLYSYIEAAIERTKIDGRFLELEITESVIMENINETVR 557 Query: 402 LFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLT 461 + + L +GV IAIDDFGTG+S+L YL++ +D LKIDR FI I + + +A+++ Sbjct: 558 ILSRLKKLGVSIAIDDFGTGYSSLSYLKKLPIDKLKIDREFIKDIPNDKDDIAITNAIIS 617 Query: 462 LAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRW 509 ++K L++ VAEG ET E +L + QG++ S+P+ + + + Sbjct: 618 MSKSLSLKIVAEGPETKEHIEFLQNSKCDIAQGFYYSKPITIVEVEKL 665 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 79/305 (25%), Positives = 144/305 (47%), Gaps = 10/305 (3%) Query: 221 PLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSVR------MRPGREIMTA 271 + + +Y D D M + ++ M ++ M+ + A Sbjct: 1161 SIGIAVYPQDGKDADSLLKNADTAMYQAKNDGRNVYRFFTMEMQAHSSRIMQIESALRVA 1220 Query: 272 IKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHL 331 + +QF + YQP ++ + G+E L+RW HP G + P FI AE I+ + + Sbjct: 1221 LFDQQFELYYQPQTCAKSGSIIGVEALIRWNHPEMGPVSPQEFIPVAEQSGQILAIGWWV 1280 Query: 332 FELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITER 391 R + +K +N++ E + K+L + LE+TE Sbjct: 1281 LRTAIRQIKIWSEHGKPCIKVAVNLSAVQFRYEDLPKQVMKILEEEGVSPEFLELELTES 1340 Query: 392 DMLKEQEA-TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTET 450 + EA ++ L G++++IDDFGTG+S+L YL+RF + LKID+ FI + ++ Sbjct: 1341 VAMANPEAVIEMMDKLVGHGIKMSIDDFGTGYSSLSYLKRFKVSKLKIDQSFIRDLAVDS 1400 Query: 451 ITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 +++A+++L+K L + T+AEGVET Q +L E+ + +QG++ S+ L + F + Sbjct: 1401 DDRSIIEAIISLSKALGLKTIAEGVETQAQLDFLQEKQCDEIQGFYYSKALTPEAFDAFY 1460 Query: 511 KKPYT 515 +K Sbjct: 1461 EKQSQ 1465 >UniRef50_B7JYN2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=10 Tax=Cyanobacteria RepID=B7JYN2_CYAP8 Length = 593 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 92/325 (28%), Positives = 156/325 (48%), Gaps = 9/325 (2%) Query: 195 STFSSRLMNVNELTDMPVRETKIAGIPLTVRLY-ADDWTWNDVWYAFLLGGMSGTVVGLL 253 T + ++ +LT+ + + G+ + Y + D A G + Sbjct: 268 QTIKKQFVSPFQLTEREIFTSPSIGLTFSSPKYKHPEEILRDADIAMARAKQKGRGRYEV 327 Query: 254 CYYLMSVR----MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEI 309 M + + ++ AI+ ++F V YQP++ + ++ G E L+RW+HP G I Sbjct: 328 FDEEMHTQALKLLNLETDLRRAIENQEFLVYYQPIMALEKTKIVGFEALIRWQHPKKGFI 387 Query: 310 PPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPV--GVKFGINIAPDHLHSESFK 367 P FI AE +I+P+ Q + + + ++ LP + +N++ L Sbjct: 388 SPGEFIPIAEETGLIIPIGQIVLKEACQQLKTWQEKLPKAKNLTISVNLSSQQLKEPEIL 447 Query: 368 ADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALI 426 I L + LEITE +++ + AT L L ++I++DDFGTG+S+L Sbjct: 448 QHIDHSLNVTGLQPESLKLEITESLLMENADVATTLLRQLKERKIQISLDDFGTGYSSLS 507 Query: 427 YLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSE 486 YL RF +D LKIDR F+N IG ++ +++ LA L+M VAEG+ET +Q +L Sbjct: 508 YLHRFPVDTLKIDRSFVNCIGKPEENLTIIQSIMALAHNLDMDVVAEGIETEKQLTFLKF 567 Query: 487 RGVNFMQGYWISRPLPLDDFV-RWL 510 F QGY+ S+PLP + ++L Sbjct: 568 LECEFGQGYFFSKPLPSHEVENQFL 592 >UniRef50_Q07P60 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=12 Tax=Rhizobiales RepID=Q07P60_RHOP5 Length = 834 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 99/345 (28%), Positives = 147/345 (42%), Gaps = 14/345 (4%) Query: 178 RQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDW-----T 232 E + ++ S F++R++ + + G + + L D Sbjct: 485 GDEFAIVLVSVVSPNEASDFAARVIERLSVPYDVDGLEVVIGASIGIALSPGDGDNGEDL 544 Query: 233 WNDVWYAFLLGGMSGTVVGLLCYYLMSV----RMRPGREIMTAIKREQFYVAYQPVVDTQ 288 + A SG M R ++ A + QF + YQP+VD Sbjct: 545 LRNADMALYRAKESGGGNHHFFEKEMDRQAQKRRDMEIDLRYAFAKGQFELYYQPLVDVA 604 Query: 289 ALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPV 348 RV G E LLRWRHP G I P FI AE +IV L + + +AA P Sbjct: 605 RDRVAGFEALLRWRHPERGMISPADFIPVAEDIGLIVGLGEWVLRQACAEAATW----PS 660 Query: 349 GVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEA-TQLFAWLH 407 +K +N++P S + + L ++ LEITE L E EA + Sbjct: 661 EIKIAVNLSPVQFRSRNLVQAVIGALAQSGLSPRRLELEITESVFLAETEANLATLHQMR 720 Query: 408 SVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLN 467 +GV I++DDFGTG+S+L YL F D +KIDR F+ + ++ A+ L + LN Sbjct: 721 DLGVRISMDDFGTGYSSLSYLRSFPFDKIKIDRSFVQDLAQRPDCLAIVRAIAGLGRSLN 780 Query: 468 MLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 + T AEGVET Q WL E G N +QG+ S P + + + Sbjct: 781 ITTTAEGVETQAQLDWLREEGCNEVQGFLFSPARPAGEIAALIAR 825 >UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K2X7_AZOSB Length = 1070 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 98/319 (30%), Positives = 157/319 (49%), Gaps = 7/319 (2%) Query: 194 LSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYAD-DWTWNDVWYAFLLGGMSGTVVGL 252 L + L L D T G+ L R D D A +G V Sbjct: 744 LGRLQAALAEPFRLDDRSFFVTCSIGVSLYPRDGGDGDTLLKHADIAMYQAKAAGRNVVR 803 Query: 253 LCYYLMSV----RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGE 308 M++ R++ + +A++ + ++A+QP VD + +V G E LLRW+HP G Sbjct: 804 FFTAEMNIQVRDRLQLEGALRSALENGELHLAFQPQVDGGSGQVIGAEALLRWQHPELGA 863 Query: 309 IPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKA 368 +PP FI AE +I P+ + + R A + E+ ++ +N++ S A Sbjct: 864 VPPVRFIPLAEETGLIGPIGEWVLRAACRQARQWEQAG-RRLRIAVNVSARQFRSPDLPA 922 Query: 369 DIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIY 427 I ++L + LE+TE ++ + E A ++ L +GV +A+DDFGTG+S+ Y Sbjct: 923 RIAEILDETGLPPALLELELTESMLMGDAEQAEEMLHRLKQLGVSLALDDFGTGYSSFAY 982 Query: 428 LERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSER 487 L+RF +D LKID+ F+ ++ ++ A++ LA L M +AEGVETP Q R L E Sbjct: 983 LQRFPIDTLKIDQSFVRSMVAGVRGEAIVVAIIALAHSLGMRVIAEGVETPLQQRQLFEF 1042 Query: 488 GVNFMQGYWISRPLPLDDF 506 G + +QGY RP+P +F Sbjct: 1043 GCDELQGYLFGRPVPAAEF 1061 >UniRef50_Q0BFB8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=5 Tax=Burkholderia RepID=Q0BFB8_BURCM Length = 860 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 81/300 (27%), Positives = 143/300 (47%), Gaps = 10/300 (3%) Query: 221 PLTVRLYADDWTWNDVWYAFLLGGMSGTVV-GLLCYYLMSVRMR--------PGREIMTA 271 + V L D T + + G CY + + + A Sbjct: 389 SVGVSLCPTDGTNAETLLKTADAALYAAKEHGRNCYRFYTRELGARVEEQTILENALHQA 448 Query: 272 IKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHL 331 + + + YQP VD + +++G+E L+RWR P G IPPD FI AE +I+P+ + + Sbjct: 449 VANHELELYYQPKVDLKTGQISGVEALIRWRRPGIGVIPPDRFIPIAEDCGLILPIGEWV 508 Query: 332 FELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITER 391 A + ++ +N++ + A ++ L + LE+TE Sbjct: 509 LRTACMQAVAWRREGHPPIRIAVNLSARQFRQQDVAAMVRTTLEETGLAPDSLELELTES 568 Query: 392 DMLKEQEATQ-LFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTET 450 ++++ A L ++GV +++DDFGTG+S+L YL+ +D +KIDR F++ + T Sbjct: 569 VLMQDCNAIAHTLRELKALGVVLSLDDFGTGYSSLSYLKDLPIDVVKIDRSFLDDVTTSA 628 Query: 451 ITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 + + +++ +A+ L+M TVAEGVET Q +L+ + MQGY+ S P+ D+ L Sbjct: 629 EGASLTRSIIAMAESLHMETVAEGVETEAQLSFLNRHRCHAMQGYYFSHPVTGDEIADML 688 >UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=C7QU83_CYAP0 Length = 1514 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 112/426 (26%), Positives = 175/426 (41%), Gaps = 24/426 (5%) Query: 116 PLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFY 175 L +L L + +D +I T + I N + A L L Sbjct: 1087 HLTDLPNRLLLKARLDQSIQQATRKRTKLAVVFIDLDRFKHINDSMGHAAGDALLQQLAQ 1146 Query: 176 SSRQ--EDYDGVALIIGNTALSTFSS------------RLMNVNELTDMPVRETKIAGIP 221 RQ D VA I G+ ++ +LM V E + Sbjct: 1147 RLRQVLRSSDTVARISGDEFVAVLEDIEDIQHASMVVAKLMTVFEEPFPLEGQIIHMTSS 1206 Query: 222 LTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSVRMR------PGREIMTAI 272 + + L+ DD + M C+Y + + A+ Sbjct: 1207 MGLSLFPDDGMDTAILLRNADSAMYRAKEEGRNTYCFYAEEMTSAAFEYVLFENALRGAL 1266 Query: 273 KREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLF 332 KR +FY+ YQP +D + R G+EVLLRW HP G + P FI AE +I + + Sbjct: 1267 KRNEFYLVYQPQIDLSSHRWVGMEVLLRWHHPELGIVSPAQFIPIAEQSGLIQEIGTWVL 1326 Query: 333 ELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERD 392 A +N+A + +F +Q L S + LE+TE Sbjct: 1327 YRACCQAKTWLDQGIDFGHIAVNVAAPQIQQNNFVHLVQDALDSSGLPSPHLELELTEGL 1386 Query: 393 MLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETI 451 ++ + E + L +G+ +AIDDFGTG+S+L YL+R ++ LKID+ F+ I +T Sbjct: 1387 VMHQTEDRIKQLEVLQDMGIYLAIDDFGTGYSSLSYLKRLPINKLKIDKSFVRDIPHDTN 1446 Query: 452 TSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 + +AV+ L K LN+ +AEGVE QA +L E+G + QGY S+PLP ++ + Sbjct: 1447 DMAISEAVIALGKALNLRIIAEGVEQEIQATFLREKGCHEAQGYLYSKPLPPEEITQLFA 1506 Query: 512 KPYTPQ 517 + Q Sbjct: 1507 EVSQWQ 1512 >UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBJ6_METSD Length = 1150 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 91/342 (26%), Positives = 166/342 (48%), Gaps = 11/342 (3%) Query: 185 VALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGG 244 +A + + ++ + R+++ E + + ++ +D T + Sbjct: 809 IANLPDPSVMTLIAQRVLDALAAPYDLEGEIVYLSASIGITVFPEDATTSAELLKNADQA 868 Query: 245 MS---------GTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGL 295 M + + + RMR R++ A+ QF V +QP+VD + R+ Sbjct: 869 MYEAKKNGRNRFSFFTPMMQAMAQARMRMMRDLRNALGLNQFTVYFQPIVDLSSQRIHKA 928 Query: 296 EVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGIN 355 E L+RW+HP G I P FI AE +I + +F+ A+ + ++ + +N Sbjct: 929 EALIRWQHPELGFISPAEFIPLAEETGLIHEIGDWVFQQSAQLVKQCIPIVGDDFQVSVN 988 Query: 356 IAPDHLHSESFK-ADIQKLLTSLPAHHFQIVLEITERDMLK-EQEATQLFAWLHSVGVEI 413 +P + D + L+ L IV+EITE +L + + G+++ Sbjct: 989 KSPVQFRDRTQAHQDWMEYLSGLGLSGHNIVVEITEGLLLNADSGISDKLLHFRDAGMQV 1048 Query: 414 AIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAE 473 AIDDFGTG+S+L YL++F +DYLKID+ F+ + E + +A+ T+A +L++ +AE Sbjct: 1049 AIDDFGTGYSSLSYLKKFDIDYLKIDQSFVRNLSGEGEDLALCEAIATMAHKLDLRVIAE 1108 Query: 474 GVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYT 515 GVET Q L++ G ++ QGY SRP+P ++F++ L++ Sbjct: 1109 GVETTAQRDLLAQIGCDYGQGYLFSRPVPAEEFMQLLERSAA 1150 >UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Caulobacteraceae RepID=B8H3B9_CAUCN Length = 748 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 93/343 (27%), Positives = 152/343 (44%), Gaps = 14/343 (4%) Query: 178 RQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDW-----T 232 E + + + ++R++ + G + V L D Sbjct: 359 GDEFAIVQTGLDDSNGATRLAARIVEAMAAPFDLQGHHVVIGASVGVSLAPTDGDDADEL 418 Query: 233 WNDVWYAFLLGGMSGTVVGLLCYYLMSVRMR----PGREIMTAIKREQFYVAYQPVVDTQ 288 A G M +++ ++ A++ +F + YQP+ Sbjct: 419 LKKADMALYRAKADGRGAYHFFERAMDEQLQARRALELDLRRALQAGEFELFYQPLYHLG 478 Query: 289 ALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPV 348 RVTG E LLRWRHP G + P FI AE +IV L + + +AA P Sbjct: 479 DERVTGCEALLRWRHPERGMVSPADFIPLAEEIGLIVQLGEWVLRRACAEAANW----PE 534 Query: 349 GVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEA-TQLFAWLH 407 V+ +N++P + L + ++ LEITE +L++ +A + L Sbjct: 535 HVRLAVNLSPAQFRDRGLVRTVVSALAASGLPAQRLELEITESVLLQDSQANMTMLHDLK 594 Query: 408 SVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLN 467 ++GV I++DDFGTG+S+L YL F D +KID+ F+ I ++ ++ AVL L + Sbjct: 595 ALGVRISMDDFGTGYSSLSYLRSFPFDKIKIDQTFVRDILHDSDAMAIIKAVLDLGASMG 654 Query: 468 MLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 ++T AEGVET Q L ++G +QGY+ISRP P + + L Sbjct: 655 VVTTAEGVETQAQLDALRQQGCAEIQGYFISRPAPASEIAKML 697 >UniRef50_C9PD80 Rtn protein n=2 Tax=Vibrio RepID=C9PD80_VIBFU Length = 501 Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 122/494 (24%), Positives = 226/494 (45%), Gaps = 21/494 (4%) Query: 16 CIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDT 75 + ++ +V + + + ++ +L++ ++ Sbjct: 4 ALAIILLPLPIVISAAYRAGMESVDSNLTNMANSYVSRIEVIINELRNENEKAL-YNPRN 62 Query: 76 CQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAIL 135 C++ +L F +R ++V D CSS GE+ ++ P I NV + L Sbjct: 63 CEKLQDDL----LFESILREMLIVNDGTITCSSKRGELSRDISRYYPNGQIKSNVVLFDL 118 Query: 136 PGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALS 195 G P K +++ + GV + + N +A + +T Sbjct: 119 EGDPA---KRTLLVIDADAHDTTHGVISVVEKNYIAGRLGYHTDNRIKKLAFKLHDTTYP 175 Query: 196 TFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGM----SGTVVG 251 +++ VN K + L A D + +LLG + + +V+ Sbjct: 176 -YNASFNTVNRSV-----VAKSDRYSFLLMLEASDPYVTERLTFYLLGALPVSFAISVLI 229 Query: 252 LLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPP 311 + + R ++ ++R + ++AYQPVV ++ + G E L+RW +P G + P Sbjct: 230 TILLFFFGGRSSLVDDLRKGLERRELFMAYQPVVRSEPCEIKGFEALVRWVNPKLGFVGP 289 Query: 312 DAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQ 371 D FI AE +I LT ++ + + RD ++ L G+NI P +L ++ Sbjct: 290 DNFIPIAEEFGLINKLTDYVLDSVLRDWSK--AKLMECHHMGVNIPPSYLLDPVCVEKLK 347 Query: 372 KLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERF 431 + + + Q++ EITER +L +++ Q+ L + G+ +AIDDFGTG +AL L+ Sbjct: 348 QYAKAYKDINLQLIAEITERQLL-DEQGQQVLHELRNSGILVAIDDFGTGRTALSVLQNI 406 Query: 432 TLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNF 491 D+LKID+ F++ IG E++ +PVL+A++ L+ +L + VAEGVET Q+ +L E+GV + Sbjct: 407 EFDFLKIDKCFVDTIGVESVNAPVLNAIIDLSHQLQVEIVAEGVETKVQSCYLKEKGVQY 466 Query: 492 MQGYWISRPLPLDD 505 QGY+ ++PL D Sbjct: 467 QQGYYYAKPLSFSD 480 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 77/247 (31%), Positives = 127/247 (51%), Gaps = 1/247 (0%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+ ++ A++ +F + YQP R+TG E LLRW+HP G +PP FI E Sbjct: 1154 RLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEALLRWQHPRRGLVPPSEFIPVLEE 1213 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 ++ + L + K K +N++ I +L Sbjct: 1214 IGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFADGQLGERIAAILYETGIP 1273 Query: 381 HFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 + LE+TE ++ + EA Q+ + L +G+ IA+DDFGTG+S+L YL++F +D LKID Sbjct: 1274 PACLELELTESILMSDVAEAMQILSGLKRLGLAIAVDDFGTGYSSLNYLKQFPIDVLKID 1333 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 R F++ + + + A++ +A LN++ +AEGVE+ Q +L E G + +QGY R Sbjct: 1334 RSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQGYLFGR 1393 Query: 500 PLPLDDF 506 P+P + F Sbjct: 1394 PMPAEQF 1400 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 87/250 (34%), Positives = 135/250 (54%), Gaps = 1/250 (0%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+ + A++R +F + YQP + + G E LLRWRHP G +PP FI AE Sbjct: 535 RLLLENGLRMALERHEFELHYQPQLSAGERALAGAEALLRWRHPQLGLVPPARFIALAEE 594 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +I P+ + R A + + +N++P S A + L + Sbjct: 595 TGLIKPIGDWVLREACRQLAAWDAQGLRVPRLAVNLSPRQFGQPSLPAKVAGALQAAGLA 654 Query: 381 HFQIVLEITERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 ++ LEITE +++ EA L + L S+GV ++IDDFGTG+S+L +L+RF LD LKID Sbjct: 655 AGRLELEITESMIMQSPTEAVSLLSELKSLGVWLSIDDFGTGYSSLSHLKRFPLDTLKID 714 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 + F+ + + + + +A+L +AK+L VAEGVE+ EQA +L +G + +QGY R Sbjct: 715 QSFVEGLPDDDDNAAIAEAILAMAKKLKFQVVAEGVESEEQAAFLEGKGCHVLQGYHFGR 774 Query: 500 PLPLDDFVRW 509 PLP +F Sbjct: 775 PLPAGEFAAL 784 >UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y2_9PROT Length = 814 Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 78/256 (30%), Positives = 138/256 (53%), Gaps = 3/256 (1%) Query: 258 MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 ++ R+ E+ A+ R+QF + YQ VD + R G E L+RW HP G +PPD FI Sbjct: 555 VTARVALEGELHKALDRQQFRLHYQIQVDA-SGRPLGAEALIRWMHPERGLVPPDQFIGM 613 Query: 318 AESQKMIVPLTQHLFELIARDAAELEKVLP-VGVKFGINIAPDHLHSESFKADIQKLLTS 376 AE +I+P+ Q + + ++ P + +N++ H F ++ + Sbjct: 614 AEETDLILPIGQWVMDTACAQLKTWQQHAPTRDLVLAVNVSATQFHQLDFVFQVRATVQR 673 Query: 377 LPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDY 435 + LE+TE +L+ ++ + L +GV+ ++DDFGTG+S+L YL+R LD Sbjct: 674 HAIDPKLLKLELTESMLLENIEDTIRTMNALKEIGVQFSLDDFGTGYSSLQYLKRLPLDQ 733 Query: 436 LKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGY 495 +KID+ F+ I +++ ++ ++ +A+ L + +AEGVET EQ ++L + G QGY Sbjct: 734 IKIDQSFVRDIASDSNDREIVGTIIAMAQNLYLDVIAEGVETEEQRQFLQDNGCTHFQGY 793 Query: 496 WISRPLPLDDFVRWLK 511 +P+P++ F L+ Sbjct: 794 LFGKPVPVEQFEAMLQ 809 >UniRef50_C6QP03 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QP03_9BACI Length = 802 Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 95/253 (37%), Positives = 142/253 (56%), Gaps = 2/253 (0%) Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+R ++ TA++ +F + YQP V+ Q+ V+ +E L+RW+HP G + P FI AE Sbjct: 542 RIRLENDLQTALENNEFSLYYQPKVNVQSGTVS-VEALIRWKHPQLGMVSPAEFIPIAEE 600 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 MI + + + + D L K +K +N++ S KA + +LTS Sbjct: 601 TNMIERIGKWVLQQSCDDLKTLHKSGFSALKMAVNLSARQFMDSSLKATVSNILTSADVP 660 Query: 381 HFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 V EITE ++KE E ++ L G+ IAIDDFG +S+L YL RF +D +KID Sbjct: 661 PSSFVFEITETTIMKEPNEVIRILQALKEQGIMIAIDDFGVSYSSLNYLNRFPIDAVKID 720 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 R FI + +++A+++LA RLN+ AEGVET EQ R+L E+G + MQGY+ SR Sbjct: 721 RSFIRDFHENRKGAEIVEAIISLAHRLNLSVTAEGVETEEQVRFLLEKGCDEMQGYYFSR 780 Query: 500 PLPLDDFVRWLKK 512 P+PL+ L K Sbjct: 781 PVPLEQLPNVLMK 793 >UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation kinase n=2 Tax=Bacillaceae RepID=A3IAQ2_9BACI Length = 934 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 76/248 (30%), Positives = 138/248 (55%), Gaps = 2/248 (0%) Query: 262 MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQ 321 ++ ++ A++R++ + YQP ++ + ++ G+E LLRW H G I PD FI AE Sbjct: 684 IKLENDLYKALERDELIIFYQPQINYKTNKIKGVEALLRWNHREHGMITPDRFIPLAEET 743 Query: 322 KMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHH 381 +IVP+ + + + + E + +N++ + + I+ +L Sbjct: 744 GLIVPIGEWVLKEACKQLKEWHNQGYPLISMSVNLSVHQFEQNNLFSIIENVLYETDLSP 803 Query: 382 FQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDR 440 + LE+TE ++K E T + L+ +GV +AIDDFGTG+S+L YL+ + LKID+ Sbjct: 804 EYLQLELTENLIVKNTEVTLKTMTQLNGLGVNLAIDDFGTGYSSLGYLKNLPISTLKIDK 863 Query: 441 GFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRP 500 F+ + T+ + + + ++TLA+ L + +AEGVET EQA +L E+ + MQGY+ S+P Sbjct: 864 SFVQEMLTD-DAAAITNTIITLAQNLKLEVIAEGVETKEQADYLLEQNCHLMQGYFFSKP 922 Query: 501 LPLDDFVR 508 + + ++ Sbjct: 923 MKAGEIMK 930 >UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6N3_NITMU Length = 1025 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 95/337 (28%), Positives = 160/337 (47%), Gaps = 10/337 (2%) Query: 178 RQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVW 237 E ++ ++ + + ++++ ++ + L + +Y D T D Sbjct: 667 GDEFALILSDLVQPEDATLIAEKVISALQVPFELETQEIYVSASLGISIYPGDGTDADSL 726 Query: 238 YAFLLGGMSGTVV---GLLCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQ 288 M + +YL + R++ ++ A+ R +F + YQP Sbjct: 727 LRNADTAMFQAKEQGPAIYQFYLPQMNERAVARLKIETQLRGALARREFVLHYQPKASLI 786 Query: 289 ALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPV 348 +TG E LLRW+HP G +PP FI+ E +IV + + + + + E + V Sbjct: 787 NGEITGFEALLRWQHPAHGLVPPLQFISVLEDTGLIVAVGEWVVKTVCEQIREWQGQGLV 846 Query: 349 GVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLH 407 IN++ + + I + L + + E+TE ++KE E A L Sbjct: 847 LHPIAINLSARQFQQQDLDSIIGETLRATNIDPRLLEFELTESVLMKEAEMAANALQNLK 906 Query: 408 SVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLN 467 + GV+I++DDFGTG+S+L YL+RF LD LKIDR FI + T+ + + A++ LA L Sbjct: 907 AFGVQISMDDFGTGYSSLAYLKRFPLDVLKIDRAFIRDVTTDPDDATITVAMIKLAHSLG 966 Query: 468 MLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLD 504 + VAEGVET Q +L G + MQGY+ S+PLPL+ Sbjct: 967 LKVVAEGVETRAQLEFLIRHGCDEMQGYYFSQPLPLE 1003 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 86/306 (28%), Positives = 151/306 (49%), Gaps = 14/306 (4%) Query: 219 GIPLTVRLYADD-----WTWNDVWYAFLLGGMSGTVVGLLCYYLMSV------RMRPGRE 267 G + + +Y DD D A G C+Y ++ R++ Sbjct: 494 GASIGIAIYPDDGDNFNALMKDADTAMYRAKQKGR--NTFCFYDSNMNDEALDRLKLEEA 551 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A+ R +F + YQP VD Q R +G+E L+RW P G++ P FI AE +I + Sbjct: 552 LRRALVRGEFQLFYQPQVDLQTGRTSGVEALIRWNSPERGQVSPALFIPVAEESNLISMI 611 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + E R A + G+K +N++ + + I L+ Q+ +E Sbjct: 612 GWWVLEESCRQIAAWREAGLTGIKVAVNVSGRQFLNHALVECISDLMAQYAVLPSQLEIE 671 Query: 388 ITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE ++ E + A + L +G+++++DDFGTG+S+L YL+R L +K+DR F+ + Sbjct: 672 LTESTVMAEPDRAIEQLTRLREIGIQVSVDDFGTGYSSLSYLKRLPLSTIKVDRSFVRDV 731 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 ++ + ++ A+L LA L+M VAEGVET + + L + G +QG+ ++P+P D Sbjct: 732 NNQSDNAAIVSAILGLADALDMSIVAEGVETEGEEQHLKDAGCIKVQGFRYAKPMPADQL 791 Query: 507 VRWLKK 512 W+ + Sbjct: 792 AAWMLR 797 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 81/258 (31%), Positives = 135/258 (52%), Gaps = 1/258 (0%) Query: 260 VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAE 319 R+ + A++RE+F + YQP V+ + ++ LE L+RW++P G I P+ FI AE Sbjct: 442 RRLTMENSLRKALQREEFSLYYQPKVNIKTGQIVCLEALVRWQNPEMGLILPNQFIPLAE 501 Query: 320 SQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPA 379 +I+PL + + + + ++ +N +P ++++L Sbjct: 502 DTGLIIPLGEWVLRTACAQNKTWQLLNYPPMRVAVNFSPRQFQQPRLTDMVEQILGEADL 561 Query: 380 HHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKI 438 + LE+TE ML+ E Q L ++G+ I+IDDFGTG+S+L Y+++ + LKI Sbjct: 562 APCWLELELTENVMLQNVEKTVQTLNRLSNLGIHISIDDFGTGYSSLSYIKKLPIQTLKI 621 Query: 439 DRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWIS 498 DR F++ I T + + AV+T+A+ L + +AEGVET EQ + L MQGY S Sbjct: 622 DRSFVHDINTNADDAAIAIAVITMAQSLRLNVIAEGVETLEQMKLLDGLNCPEMQGYLFS 681 Query: 499 RPLPLDDFVRWLKKPYTP 516 +PLP+ + L P Sbjct: 682 KPLPVAEMTTLLSNIKWP 699 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 565 e-159 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 559 e-158 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 555 e-156 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 550 e-155 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 550 e-155 UniRef50_P76446 Protein rtn n=101 Tax=Enterobacteriaceae RepID=R... 550 e-155 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 543 e-153 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 540 e-152 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 536 e-151 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 535 e-150 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 535 e-150 UniRef50_A1SZV0 Response regulator receiver modulated diguanylat... 533 e-150 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 533 e-150 UniRef50_C6ML43 Response regulator receiver modulated diguanylat... 532 e-149 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 531 e-149 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 530 e-149 UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibac... 528 e-148 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 527 e-148 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 526 e-148 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 526 e-148 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 526 e-147 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 526 e-147 UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibac... 524 e-147 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 524 e-147 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 524 e-147 UniRef50_B7HSZ4 Response regulator receiver modulated diguanylat... 523 e-147 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 523 e-147 UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter... 522 e-146 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 522 e-146 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 522 e-146 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 522 e-146 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 521 e-146 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 520 e-146 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 519 e-145 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 518 e-145 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 518 e-145 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 517 e-145 UniRef50_B5E7Y8 Response regulator receiver modulated diguanylat... 516 e-145 UniRef50_A0LH12 Response regulator receiver modulated diguanylat... 515 e-144 UniRef50_A8FYM5 Signal transduction protein containing a membran... 515 e-144 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 515 e-144 UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 515 e-144 UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Maripro... 515 e-144 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 515 e-144 UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 514 e-144 UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 514 e-144 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 513 e-144 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 513 e-144 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 512 e-143 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 511 e-143 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 511 e-143 UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Co... 511 e-143 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 510 e-143 UniRef50_A8ZUW0 Diguanylate cyclase/phosphodiesterase with PAS/P... 510 e-143 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 510 e-143 UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 510 e-143 UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/P... 510 e-143 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 510 e-143 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 510 e-143 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 510 e-143 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 509 e-142 UniRef50_Q0BFB8 Response regulator receiver modulated diguanylat... 509 e-142 UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Ba... 509 e-142 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 509 e-142 UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA a... 508 e-142 UniRef50_Q1K1R0 Response regulator receiver modulated diguanylat... 508 e-142 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 508 e-142 UniRef50_Q3A1F4 Response regulator receiver modulated diguanylat... 508 e-142 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 508 e-142 UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/P... 508 e-142 UniRef50_Q1JW23 Diguanylate cyclase/phosphodiesterase with PAS/P... 507 e-142 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 507 e-142 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 507 e-142 UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbi... 506 e-142 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 506 e-142 UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/P... 506 e-142 UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Maripro... 506 e-142 UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 506 e-142 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 506 e-141 UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/P... 506 e-141 UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ma... 506 e-141 UniRef50_Q47HF3 Response regulator receiver modulated diguanylat... 505 e-141 UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiat... 505 e-141 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 505 e-141 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 505 e-141 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 505 e-141 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 505 e-141 UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 505 e-141 UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 505 e-141 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 504 e-141 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 504 e-141 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 504 e-141 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 504 e-141 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 504 e-141 UniRef50_A1AMG1 Response regulator receiver modulated diguanylat... 504 e-141 UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation ki... 503 e-141 UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/P... 503 e-141 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 503 e-141 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 503 e-141 UniRef50_Q9I310 Uncharacterized signaling protein PA1727 n=74 Ta... 503 e-141 UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC 503 e-141 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 503 e-141 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 503 e-141 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 502 e-140 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 502 e-140 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 502 e-140 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 502 e-140 UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase... 501 e-140 UniRef50_C6E011 Response regulator receiver modulated diguanylat... 501 e-140 UniRef50_B5ED91 Diguanylate cyclase/phosphodiesterase n=3 Tax=Ge... 501 e-140 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 500 e-140 UniRef50_B8GNC0 Signal transduction protein containing a membran... 500 e-140 UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplast... 500 e-140 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 500 e-140 UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 500 e-140 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 500 e-140 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 499 e-140 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 499 e-140 UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 499 e-140 UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfuro... 499 e-140 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 499 e-140 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 499 e-139 UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=unc... 499 e-139 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 498 e-139 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 498 e-139 UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/P... 498 e-139 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 498 e-139 UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 498 e-139 UniRef50_Q1GYK0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 498 e-139 UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 498 e-139 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 497 e-139 UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/P... 497 e-139 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 497 e-139 UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pe... 497 e-139 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 496 e-139 UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 496 e-139 UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 496 e-138 UniRef50_Q2W3S8 Predicted signal transduction protein containing... 496 e-138 UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 495 e-138 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 495 e-138 UniRef50_B7S1Z2 Cyclic diguanylate phosphodiesterase domain prot... 495 e-138 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 495 e-138 UniRef50_A8GGV3 Diguanylate phosphodiesterase n=11 Tax=Enterobac... 494 e-138 UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magneto... 494 e-138 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 494 e-138 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 494 e-138 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 494 e-138 UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=... 494 e-138 UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/P... 493 e-138 UniRef50_C1DB08 Predicted signal transduction protein containing... 493 e-138 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 493 e-138 UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF s... 493 e-138 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 493 e-138 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 493 e-138 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 493 e-137 UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 493 e-137 UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extra... 492 e-137 UniRef50_Q74EC6 Sensory box/response regulator n=1 Tax=Geobacter... 492 e-137 UniRef50_A1ALB3 Response regulator receiver modulated diguanylat... 492 e-137 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 492 e-137 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 491 e-137 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 491 e-137 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 491 e-137 UniRef50_A6WTB4 Diguanylate cyclase/phosphodiesterase with PAS/P... 491 e-137 UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/P... 491 e-137 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 491 e-137 UniRef50_B7KBH1 Diguanylate cyclase/phosphodiesterase n=9 Tax=Ch... 490 e-137 UniRef50_B6BGL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 490 e-137 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 489 e-137 UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylat... 489 e-137 UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=ce... 489 e-137 UniRef50_A3JAE8 Predicted signal transduction protein containing... 489 e-137 UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/P... 489 e-137 UniRef50_B7KEZ6 Response regulator receiver modulated diguanylat... 489 e-137 UniRef50_C6P3U3 Response regulator receiver modulated diguanylat... 489 e-137 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 489 e-137 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 489 e-136 UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/P... 489 e-136 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 489 e-136 UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 489 e-136 UniRef50_C5V2W0 Response regulator receiver modulated diguanylat... 489 e-136 UniRef50_Q47EK9 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 489 e-136 UniRef50_A1K5F7 EAL/GGDEF-domain containing signaling protein n=... 488 e-136 UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobac... 488 e-136 UniRef50_C1DJP1 Cyclic di-GMP signal transduction protein n=1 Ta... 488 e-136 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 488 e-136 UniRef50_A8VRH4 Putative uncharacterized protein n=1 Tax=Bacillu... 488 e-136 UniRef50_Q3A6S1 Diguanylate cyclase/phosphodiesterase with PAS/P... 488 e-136 UniRef50_C9Y8E7 Putative uncharacterized protein n=1 Tax=Curviba... 487 e-136 UniRef50_Q2BNG9 PAS sensor diguanylate cyclase/phosphodiesterase... 487 e-136 UniRef50_B7KGZ9 Response regulator receiver modulated diguanylat... 487 e-136 UniRef50_Q3MFD3 Diguanylate cyclase/phosphodiesterase n=4 Tax=No... 487 e-136 UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 486 e-136 UniRef50_B9YGE9 Diguanylate cyclase/phosphodiesterase n=1 Tax='N... 486 e-136 UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Cauloba... 486 e-136 UniRef50_Q2SF23 Predicted signal transduction protein containing... 486 e-136 UniRef50_C5D6R4 Diguanylate cyclase/phosphodiesterase with PAS/P... 486 e-135 UniRef50_B8GPC4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 486 e-135 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 485 e-135 UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 485 e-135 UniRef50_A0PXI0 Nitrogen fixation positive activator, putative n... 485 e-135 UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 485 e-135 UniRef50_Q0KC83 Predicted signal transduction protein containing... 485 e-135 UniRef50_Q2S7Q5 Predicted signal transduction protein containing... 485 e-135 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 484 e-135 UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/P... 484 e-135 UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 484 e-135 UniRef50_A6CPZ0 Putative uncharacterized protein n=1 Tax=Bacillu... 484 e-135 UniRef50_B1Y5R0 Response regulator receiver modulated diguanylat... 484 e-135 UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF s... 484 e-135 UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira b... 484 e-135 UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/P... 484 e-135 UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/P... 484 e-135 UniRef50_A4U1P1 Sensory box/GGDEF family protein n=1 Tax=Magneto... 484 e-135 UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/P... 484 e-135 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 483 e-135 UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/P... 483 e-135 UniRef50_C1DCZ4 Predicted signal transduction protein containing... 483 e-135 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 483 e-135 UniRef50_Q1JW15 Diguanylate cyclase/phosphodiesterase with PAS/P... 483 e-135 UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 483 e-135 UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/P... 483 e-135 UniRef50_B8KPF2 Response regulator receiver modulated diguanylat... 483 e-135 UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellula... 483 e-134 UniRef50_UPI0001AEC0A6 sensory box protein n=1 Tax=Alteromonas m... 482 e-134 UniRef50_Q3A2U2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 482 e-134 UniRef50_D2SGK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 482 e-134 UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 482 e-134 UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 482 e-134 UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 482 e-134 UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/P... 482 e-134 UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 482 e-134 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 481 e-134 UniRef50_C6XBI7 Diguanylate cyclase/phosphodiesterase with PAS/P... 481 e-134 UniRef50_B8HNE5 Diguanylate cyclase/phosphodiesterase with PAS/P... 481 e-134 UniRef50_B7RSV6 Cyclic diguanylate phosphodiesterase domain prot... 481 e-134 UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS... 481 e-134 UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 T... 481 e-134 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 481 e-134 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 481 e-134 UniRef50_B0SAR7 Signal transduction protein n=2 Tax=Leptospira b... 481 e-134 UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/P... 481 e-134 UniRef50_B7GID3 Multidomain signal transduction protein (Contain... 480 e-134 Sequences not found previously or not previously below threshold: UniRef50_C0QA93 Signal transduction family protein (GGDEF domain... 494 e-138 UniRef50_B9M6C9 Response regulator receiver modulated diguanylat... 492 e-137 UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candida... 489 e-137 UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/P... 488 e-136 UniRef50_Q2B961 Putative uncharacterized protein n=1 Tax=Bacillu... 483 e-135 UniRef50_C0N514 Putative uncharacterized protein n=1 Tax=Methylo... 482 e-134 UniRef50_D1REK0 Putative response regulator, PAS/GGDEF/EAL domai... 481 e-134 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 109/503 (21%), Positives = 198/503 (39%), Gaps = 56/503 (11%) Query: 26 LVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPEL 83 L+ L+ A + EV + + + + Y+ L +R + A Sbjct: 167 LMEDLRRHAAMLEEEVAERSRAEERIRQMA-YYDSLTGLPNRRLFNDRLRQSLALAQRHK 225 Query: 84 TARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPN 143 A +++ F L+ D T + + + + + + + Sbjct: 226 RPLAVMFLDLDRFKLIND--TLGHAVGDRLLMAVAKRLRNCCRREG-------------- 269 Query: 144 KPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMN 203 ++ E ++ I T + ++++ Sbjct: 270 ---------------------------DTVARQGGDEFIINLSAISDVKDAFTVAQKIID 302 Query: 204 VNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-----GTVVGLLCYYLM 258 V + + + +Y D D M G L M Sbjct: 303 VFRTPFVIDGYELFITTSIGISVYPHDGRSGDALVKNADVAMYRAKEQGRNNCQLFAPEM 362 Query: 259 S----VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAF 314 + R+ ++ A++R++F + YQP V+ + ++ +E L+RW+HP G +PP F Sbjct: 363 NARAFERLSLENDMRRALERDEFVLHYQPKVNVEHGQIACMEALVRWQHPSMGLVPPSRF 422 Query: 315 INFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLL 374 I AE +IVPL + + + + ++ +N++P L + ++L Sbjct: 423 IPLAEETGLIVPLGEWVLRTACQQNRAWQDAGYPTMQVAVNLSPRQLRQGDLSETVARVL 482 Query: 375 TSLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTL 433 +V+E+TE ++ + +E + F L +GV I+IDDFGTG+S+L YL++F + Sbjct: 483 AETGLAPGWLVIEVTESILMDDAEETIRTFRRLDRMGVRISIDDFGTGYSSLHYLKKFPV 542 Query: 434 DYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQ 493 LKIDR F+ I + + AV+++AK LN+ VAEGVET EQ L +MQ Sbjct: 543 HTLKIDRSFVREIASNPDDEAIAGAVISMAKGLNLGVVAEGVETVEQMEVLRALNCRYMQ 602 Query: 494 GYWISRPLPLDDFVRWLKKPYTP 516 G+ S P P + F L TP Sbjct: 603 GFLFSEPAPAEQFTPVLGHAATP 625 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 559 bits (1442), Expect = e-158, Method: Composition-based stats. Identities = 99/421 (23%), Positives = 171/421 (40%), Gaps = 24/421 (5%) Query: 112 EMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT- 170 L EL N + MA+ + + + N + + L Sbjct: 516 AYHDSLTELPNRTLFNDRLSMALNQAHRNKNKLAVMFLDLDHFKKVNDTLGHDIGDQLLK 575 Query: 171 -------------PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 ++ E + I S + ++++ + Sbjct: 576 GIAQRFSKLLRKGDTIARIGGDEFTILLHNITRAENASIVADKIIDTLANPWIIGNHEFH 635 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSV------RMRPGREI 268 + + LY DD T + M +Y ++ R + Sbjct: 636 ITTSIGIALYPDDGTDAESLLKNADAAMYQAKEMGRNNYQFYTPTMNAQTLRRFELENNL 695 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A+ R++F + YQP V+ ++ G+E L+RW+HP G I P FI AE +I+P+ Sbjct: 696 RRALDRKEFVIYYQPQVEIHTGKIVGVEALIRWQHPQRGMISPAEFIPMAEETGLIIPIG 755 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + + ++ +N++ I +L + LEI Sbjct: 756 EWILRRACAQNKAWQDRGFSPMRVTVNLSARQFLQPHLPQYISNVLEDTGLGPQWLELEI 815 Query: 389 TERDMLKEQEATQ-LFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE +K+ T+ L +G+ +AIDDFGTG+S+L YL+R +D LKIDR FI+ + Sbjct: 816 TESLAMKDVAFTEKTLIELRKMGITLAIDDFGTGYSSLNYLKRLPIDILKIDRSFIHDLN 875 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 TE+ ++ A++TL L M VAEGVET EQ +L ++ + MQGY ++PLP+ + Sbjct: 876 TESDDVAIISAIITLGHNLKMKVVAEGVETKEQLMFLRQQQCDLMQGYLFTKPLPVRELE 935 Query: 508 R 508 + Sbjct: 936 Q 936 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 555 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 101/473 (21%), Positives = 181/473 (38%), Gaps = 57/473 (12%) Query: 56 TYFADLKSTTDR--LQPLTLDTCQ-QANPELTARAAFSMNVRTFVLVKDKKTFCSSATGE 112 L +R LQ +A +++ F V D T + Sbjct: 460 ATHDPLTGLPNRNLLQDRLGQALALEAFRRRNPICVMFLDLDNFKKVND--TLGHTVGDM 517 Query: 113 MDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPS 172 + + + + G + Sbjct: 518 LLKAVANRLKNC---------LRGGD---------------------------------T 535 Query: 173 LFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWT 232 + E + + + T + +++NV + + + + L+ D Sbjct: 536 VARLGGDEYIIVLPNVREVPDVITVAKKMINVFAAPLLLMGNEIYVTASIGIALFPTDGE 595 Query: 233 WNDVWYAFLLGGMSGTV---VGLLCYYLMSV------RMRPGREIMTAIKREQFYVAYQP 283 D M +Y + R+ + A+K ++F + YQP Sbjct: 596 TVDALLKNADAAMYHAKEQGKNNYQFYSAEMNIRVFERLSLETSLHRAVKNQEFLLHYQP 655 Query: 284 VVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELE 343 VD + R+ G+E L+RW HP G + P FI AE +IVP+ + + + Sbjct: 656 RVDLRNGRICGVEALVRWNHPEMGLVSPAKFIPLAEETGLIVPMGEWVLRTACAQNKAWQ 715 Query: 344 KVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQL 402 ++ +N++ E+ A ++++L + LE+TE +++E E + + Sbjct: 716 DAGLPPLRMAVNLSARQFRQENLIAMVEEILMETGLAPQWLELELTESLVMQEAEKSAAI 775 Query: 403 FAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTL 462 L G+E+AIDDFGTG+S+L YL+RF + LKID+ FI + + + ++ ++T+ Sbjct: 776 LRELTDRGIEVAIDDFGTGYSSLSYLKRFPIANLKIDQAFIRDMTRDPDDATLVKTIITM 835 Query: 463 AKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYT 515 A L M T+AEGVE EQ +L MQGY+ SRP+ ++ R L T Sbjct: 836 AHGLGMKTIAEGVELAEQIDFLCRHQCEEMQGYYFSRPITAEELGRLLADGKT 888 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 550 bits (1419), Expect = e-155, Method: Composition-based stats. Identities = 96/518 (18%), Positives = 188/518 (36%), Gaps = 57/518 (11%) Query: 6 PNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTT 65 N+ + L V + + +++ + +Y L Sbjct: 481 RNYRKDGSLFWNALSVSPVLNAAGEVTNYVGIVNDITERKRYEEQLEYQSN-HDGLTGLP 539 Query: 66 DRLQ--PLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPA 123 +R A A F +++ F + D ++ + Sbjct: 540 NRNLLGDRIGQALTYAERYQRQTAVFFIDLDHFKFINDS--LGHDMGDKLLQIAARRLSE 597 Query: 124 LDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYD 183 + ++ E Sbjct: 598 C------------------------------------------VRSIDTVARHGGDEFVI 615 Query: 184 GVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLG 243 ++ + + + + ++ + + + LY D + V Sbjct: 616 VLSDLAVSEDAAKVARKIQDAVCRPYQIGEHELVVSCSTGISLYPKDGSDAQVLLKNADV 675 Query: 244 GMSGTV---VGLLCYYL------MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTG 294 M +Y + R+ + + A++R++F V YQP VD + R+TG Sbjct: 676 AMYRAKQCGRNNFQFYTGDLNDIVLARLTMEKYLRRALERDEFLVHYQPKVDLLSGRITG 735 Query: 295 LEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGI 354 +E L+RW+ P G I P +FI AE +IV + + + + + + Sbjct: 736 MEALVRWQSPELGFISPASFIPLAEETGLIVAIGEWVLRTACAQNKAWQDDGLPPMVVAV 795 Query: 355 NIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEI 413 N++P E + ++ I LE+ E ++ + + A + L +GV++ Sbjct: 796 NLSPRQFRQEDLADTVHRIAEETGLAPRYIELEVVESLLMDDVDGAVAMLDALKELGVQL 855 Query: 414 AIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAE 473 +DDFGTG+S+L YL+RF D +KID+ F+ I + ++ ++ V++LA LN+ VAE Sbjct: 856 TMDDFGTGYSSLSYLKRFPFDMMKIDQSFVRDITRDPGSAAIVRTVISLAHTLNLRVVAE 915 Query: 474 GVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 G+ET Q +L + MQG++ SRP+P +F + L+ Sbjct: 916 GIETEGQLGYLRGLACDEMQGFYFSRPVPAAEFEQMLR 953 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 550 bits (1417), Expect = e-155, Method: Composition-based stats. Identities = 102/465 (21%), Positives = 184/465 (39%), Gaps = 56/465 (12%) Query: 59 ADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIP 116 L +R L+ A+ +++ F V D T A + Sbjct: 522 DALTGLANRSLLRDRLSQAISYAHRYNHPIWIAFVDLDRFKFVND--TLGHQAGDLLLKA 579 Query: 117 LNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYS 176 + E + + T ++ Sbjct: 580 IAERLQ------------------------------------------HAVRDTDTVSRM 597 Query: 177 SRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDV 236 E + + + R+M+ + V +Y +D + Sbjct: 598 GGDEFVLILPERVDAGLSTGIVQRIMDGIAQPLTIEGHEFFISSSIGVAVYPNDGVTPEE 657 Query: 237 WYAFLLGGMSGTV---VGLLCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDT 287 M +Y S+ R+R ++ A++R +F + YQP +D Sbjct: 658 LIKHADIAMYRAKETGRNNFQFYTSSMNERALERLRLEGDLRNAMERGEFILHYQPQLDL 717 Query: 288 QALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLP 347 + ++ G+E L+RW+HP G IPP FI AE +IVP+ + R ++ Sbjct: 718 RTGKIVGVEALIRWQHPELGMIPPMRFIGLAEETGLIVPIGAWVIREACRQNKVWQEHGL 777 Query: 348 VGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWL 406 ++ +N++ + I L + +E+TE ++ + + A + L Sbjct: 778 GSLRMSVNLSARQFAQQDLLESIALALEETQLPPQCLEIELTESLVMADVDHAIGILREL 837 Query: 407 HSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRL 466 ++GV+++IDDFGTG+S+L YL+RF +D LKIDR F+N I T+ + ++ ++++LA L Sbjct: 838 KALGVQLSIDDFGTGYSSLSYLKRFPIDVLKIDRSFVNDITTDPDDAAIVASIISLAHSL 897 Query: 467 NMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 + +AEGVET EQ +L + + +QGY+ SRP+ D LK Sbjct: 898 RLTVIAEGVETEEQLAYLQQHDCDQIQGYFFSRPITADAMEVMLK 942 >UniRef50_P76446 Protein rtn n=101 Tax=Enterobacteriaceae RepID=RTN_ECOLI Length = 518 Score = 550 bits (1417), Expect = e-155, Method: Composition-based stats. Identities = 518/518 (100%), Positives = 518/518 (100%) Query: 1 MFIRAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFAD 60 MFIRAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFAD Sbjct: 1 MFIRAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFAD 60 Query: 61 LKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNEL 120 LKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNEL Sbjct: 61 LKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNEL 120 Query: 121 IPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQE 180 IPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQE Sbjct: 121 IPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQE 180 Query: 181 DYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAF 240 DYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAF Sbjct: 181 DYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAF 240 Query: 241 LLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLR 300 LLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLR Sbjct: 241 LLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLR 300 Query: 301 WRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDH 360 WRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDH Sbjct: 301 WRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDH 360 Query: 361 LHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGT 420 LHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGT Sbjct: 361 LHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGT 420 Query: 421 GHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQ 480 GHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQ Sbjct: 421 GHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQ 480 Query: 481 ARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQW 518 ARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQW Sbjct: 481 ARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQW 518 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 543 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 100/425 (23%), Positives = 174/425 (40%), Gaps = 12/425 (2%) Query: 97 VLVKDKKTFCSSATGEMDIPLN-ELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPL 155 L+ K + + E+ + + + L + + L Sbjct: 447 GLLNRKSFY-TRLEDELIRSYSYDGDRRRIKGHKWALFFLDVDRFKYVNDTLGHDVGDEL 505 Query: 156 LKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRET 215 LK V L + +F E + + +T ++ + ++ Sbjct: 506 LKVVAVRLKNCLRKSDYIFRLGGDEFTIILNDLTDDTDMAKVAQKIRKAIARPCRIKDHE 565 Query: 216 KIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVV----GLLCYYLMSV----RMRPGRE 267 + + + +Y DD + M M+ RM Sbjct: 566 LYITVSIGISIYPDDGDDVETLVKNADIAMYAAKEENQGYRFFIEEMNRKTLERMMLENN 625 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A++ +Q + YQP+VD ++ G+E LLRW HP G I P FI AE +IVP+ Sbjct: 626 LRNALQHDQLIIYYQPLVD-STNQIVGMEALLRWHHPELGLISPSQFIPLAEETGLIVPI 684 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + + + A + ++ +N++ I+++L + + LE Sbjct: 685 GKWVLRCACQQARKWHEMGYTRFYVAVNLSVRQFREPDLVETIEQILEATDLPPDCLKLE 744 Query: 388 ITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE +++ E A L + G+ +IDDFGTG+S+L YL+RF +D LKIDR F+ Sbjct: 745 VTESGIMEHPEQAIAKMKMLRAKGIHFSIDDFGTGYSSLSYLKRFPIDTLKIDRSFVIDS 804 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 T ++ ++ +A+ L M TVAEGVE EQ +L G + MQGY+ RP+P + F Sbjct: 805 TTNKDDQEIIKTIIAMARNLGMDTVAEGVEAKEQQDFLIHHGCHMMQGYYFGRPMPAEKF 864 Query: 507 VRWLK 511 L+ Sbjct: 865 EDMLQ 869 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 540 bits (1391), Expect = e-152, Method: Composition-based stats. Identities = 103/490 (21%), Positives = 192/490 (39%), Gaps = 58/490 (11%) Query: 38 KHEVKYDTLITDVQKYLDTYFADLKSTTDRLQP--LTLDTCQQANPELTARAAFSMNVRT 95 K ++ L + + L+ F L +R Q A +++ Sbjct: 706 KEDITEKRLTEERIEKLEH-FDHLTGLPNRTQLNERFKYALSLAQRSGEQMTVMFLDLDH 764 Query: 96 FVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPL 155 F + D T S ++ + + + + ++ Sbjct: 765 FKDIND--TLGHSIGDQLLMDVAKRLKETLRDE--------------------------- 795 Query: 156 LKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRET 215 ++ E + + +++LM + Sbjct: 796 ---------------DTVSRQGGDEFILILPG-TDENGAAHVAAKLMEAVSQAFQFEQHE 839 Query: 216 KIAGIPLTVRLYADDWTWNDVWYAFLLGGMS---GTVVGLLCYYLMSVR------MRPGR 266 +A + + +Y D + M C++ ++ ++ G Sbjct: 840 LVATCSIGIAIYPHDGENFETLSKNADTAMYRVKHDGRNGFCFFTSEMQAHSARTLQLGN 899 Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 + A+ R Q ++ YQP + TQ V G E LLRW+HP G I P FI AE I+P Sbjct: 900 ALRHALTRGQLHLHYQPQISTQDGHVVGAEALLRWQHPELGSISPAEFIPIAEDNGQIIP 959 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 + + + + + + +N++ + + +L H + L Sbjct: 960 IGEWVLRTAIKQLKDWMDSGLPPMIMAVNLSAAQFRQSNLMELVTSILDESKVPHRYLEL 1019 Query: 387 EITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 E+TE + + + A + LH+ G++++IDDFGTG+S+L YL+RF + LKID+ F++ Sbjct: 1020 ELTEAVAMDDPQLAIGVMDKLHTGGIKMSIDDFGTGYSSLSYLKRFKVYKLKIDQSFVHD 1079 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 I + ++ A++ +A L M T+AEGVET Q +L +G N +QGY+ S+PLP + Sbjct: 1080 ITDDPDDKAIVAAIINMASSLGMQTIAEGVETAGQLSFLRLQGCNEVQGYYFSKPLPAEQ 1139 Query: 506 FVRWLKKPYT 515 FV +L+K Sbjct: 1140 FVSYLQKQGQ 1149 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 536 bits (1382), Expect = e-151, Method: Composition-based stats. Identities = 109/484 (22%), Positives = 186/484 (38%), Gaps = 57/484 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ L + ++L L +R LQ +A TA A +++ F Sbjct: 673 DITQRKLSEERLQFLAN-HDALTHLPNRALLQERIDQALFRAQRNKTAIAVLFIDLDRFK 731 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 ++ D T + + + Sbjct: 732 IIND--TLGHQTGDMLLQEAAKRLKEC--------------------------------- 756 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 L T ++ E V L+T + ++M + V Sbjct: 757 ---------LRETDTVARQGGDEFVVLVEDCGDTDYLNTIARKIMATLAQPFILVGRELF 807 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSVR------MRPGREI 268 + + +Y DD M +Y + + Sbjct: 808 ISASIGISVYPDDGLDTASLLKHADAAMYRAKESGKNTFRFYAAEANTNSVELLTLENNL 867 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A++R +F + YQP VD ++ ++ G E ++RW+HP G + P FI AE +I+ + Sbjct: 868 RRAVERNEFVLHYQPKVDLRSQKIIGAEAVVRWQHPELGMLSPMQFIPLAEETGLIIDIG 927 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + R A E +++ V+ +N++ E+ + I LT + LEI Sbjct: 928 AWIMRESCRQAVEWQQLTGQNVRVAVNLSARQFRDETLRQTIADALTESGLTPDCLELEI 987 Query: 389 TERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE ++ E A ++ H +G + IDDFGTG+S+ YL+ F +D LKIDR F+ I Sbjct: 988 TESMIMHNAERAREVLQHFHDLGAHVLIDDFGTGYSSFGYLKHFPIDSLKIDRSFVRDIP 1047 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + + A++ +A L + VAEGVET EQ +L ++G + +QG+ S PL DFV Sbjct: 1048 DDVDDMAITQAIIAMAHSLQIKVVAEGVETQEQLAFLKKQGCDQIQGFLFSEPLHSHDFV 1107 Query: 508 RWLK 511 R LK Sbjct: 1108 RMLK 1111 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 106/487 (21%), Positives = 186/487 (38%), Gaps = 57/487 (11%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTF 96 ++ D + L Y+ L +R LQ QA + A Sbjct: 466 RDITDRKKAEDEIQQLA-YYDTLTGLPNRSLLQDRLGQGIVQAVRDNRKVAIMF------ 518 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 L + + LL Sbjct: 519 --------------------------------------LDLDRFKSINDTLGHVAGDSLL 540 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 + T ++ E ++ I L+ + +++ + + Sbjct: 541 ATVAERLTECVRETDTVARIGGDEFVIIISAIEHAEDLNKIAEKILAAISKPLVLNDQEI 600 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMSVRMR--------PGRE 267 + + +Y +D T M G + S M Sbjct: 601 FITASIGIAIYPEDGTDVQGLLKNADLAMYKAKDQGKNAFQYFSREMNVQALEHLILENS 660 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A++R +F + YQP +D ++ R+ G+E L+RW+HP G +PP FI AE +I+P+ Sbjct: 661 LRRALERNEFVIFYQPQMDLKSGRLVGMEALIRWQHPDLGLLPPSRFIPMAEETGLILPI 720 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + + + ++ +N+ + F I+ +L Q+ LE Sbjct: 721 GEWALQTACAKNRAWMDAGFMPLRVAVNLCGIQFRQKKFIELIEAVLKKTGLAPSQLELE 780 Query: 388 ITERDML-KEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE ++ K +E+T + L +GV +AIDDFGTG+S+L YL+ F ++ +KIDR FI + Sbjct: 781 LTESMLMSKAEESTTVLHKLKEMGVSLAIDDFGTGYSSLSYLKNFPINRVKIDRSFIRDV 840 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 + ++ A++ +A LN+ AEGVE Q +LS R N +QGY +S PLP +F Sbjct: 841 PNNPDDTAIVSAIIAMAHNLNLKVTAEGVENHSQLEFLSTRNCNEIQGYLLSSPLPEAEF 900 Query: 507 VRWLKKP 513 R+L+ Sbjct: 901 TRFLRGG 907 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 104/489 (21%), Positives = 179/489 (36%), Gaps = 57/489 (11%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTF 96 ++ ++ L +R+ A A F +++ F Sbjct: 318 RDITIRKKYEKELEHQSN-HDALTGLANRVLLDDRIQQAIVHAERAQRNTAVFLLDLDRF 376 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 ++ D S + + + E + A I PG Sbjct: 377 KVINDS--LGHSQGDAVLLAVAERLSAC---------ISPGD------------------ 407 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 +L E + + + +++N E Sbjct: 408 ---------------TLSRLGGDEFAIVMTHVNHPADARIMAQKILNAFEQPFPLGNREL 452 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVV-----GLLCYYLMSVR----MRPGRE 267 + LY D ++ M C M R + + Sbjct: 453 RITTSIGASLYPRDGEQSEDLLRHADAAMYQAKKQGGNGFQFCSEEMDTRAHKALELEGD 512 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A++ F + YQP V + ++ G E L+RW HP G I PD FI AE +I+ L Sbjct: 513 LRQALQLGSFVLHYQPKVKIASGKIDGCEALVRWNHPDKGMISPDDFIPLAEETGLIIAL 572 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + + R + +K +N++ F IQ +L + LE Sbjct: 573 GEWVLREACRQFKAWQAQGLPPIKIAVNLSARQFLQSDFVESIQTILHEFDIDPHWLDLE 632 Query: 388 ITERDMLKEQEATQL-FAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE ++++ + A L +G +++DDFGTG+S+L YL RF +D LKIDR FI + Sbjct: 633 LTESMVMEDPDRIAKLLAELKQIGFALSLDDFGTGYSSLNYLRRFPIDCLKIDRSFILDV 692 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 ++ + V ++V+ +A L + +AEGVET EQ +L+ + +QGY S+PLP +D Sbjct: 693 ASDATAASVANSVIGIAHSLGIHAIAEGVETREQYAFLAMCECDSIQGYLFSKPLPANDL 752 Query: 507 VRWLKKPYT 515 L P Sbjct: 753 AALLANPTP 761 >UniRef50_A1SZV0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZV0_PSYIN Length = 711 Score = 533 bits (1375), Expect = e-150, Method: Composition-based stats. Identities = 110/498 (22%), Positives = 182/498 (36%), Gaps = 43/498 (8%) Query: 29 CLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTAR 86 +V+ +V T D L F L +R + ++A Sbjct: 240 GAAKVVSGTVVDVTELTQAQDQILQLAH-FDSLTGLANRNAFRKRVELAMERAKQYGHLG 298 Query: 87 AAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPA 146 A +++ F + D T S ++ + + + + + GT Sbjct: 299 AVLFLDLDNFKRIND--TLGHSIGDQLLQEVARRLTDIVRGSD----SICGTNFN----- 347 Query: 147 IVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNE 206 A++ NL + E + I + R++N Sbjct: 348 ----------------HAIDDNL---ISRLGGDEFTVLLPEIGKIKDAEHAARRVLNSIG 388 Query: 207 LTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYL--------- 257 + + + ++ D M Y Sbjct: 389 DIINLSGHDIVVTPSIGIAIFPHHGENVDSLLKNADAAMYYVKRAGKNDYELFVNSMNVV 448 Query: 258 MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 R+ + AI ++ V YQP +D R+ G E LLRW G + P FI Sbjct: 449 AKRRLELESFLRHAIDNKELSVNYQPQIDIPTGRIIGAEALLRWNSAELGMVSPVEFIPI 508 Query: 318 AESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSL 377 AE +I P+ + + R E ++ +NI+ +S + K+L Sbjct: 509 AEETGLISPIGEWVLREACRQVKEWRDDGLPEIQIAVNISVQQFAKQSLDKLVSKVLLET 568 Query: 378 PAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYL 436 + LEITE ++ + E A + L +G+ +AIDDFGTG+S+L YL+RF +D L Sbjct: 569 GLPVHCLELEITENMLMDDVEGAVETLHKLKDLGINLAIDDFGTGYSSLSYLKRFPIDKL 628 Query: 437 KIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYW 496 KIDR FI + TE + V A++++A L + +AEGVE Q +L + MQGY+ Sbjct: 629 KIDRSFITYVTTEPSDAAVTQAIISMAHNLGLTVIAEGVEEASQLEFLRQHHCEEMQGYY 688 Query: 497 ISRPLPLDDFVRWLKKPY 514 SRPL D L+ Sbjct: 689 FSRPLIASDMEALLRSHK 706 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 533 bits (1373), Expect = e-150, Method: Composition-based stats. Identities = 101/490 (20%), Positives = 184/490 (37%), Gaps = 58/490 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDRL--QPLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ L Y L +RL Q ++A +++ F Sbjct: 345 DISQIKQSEAQLAQLAHY-DPLTGLPNRLLAQSQLHQAIERAQRHGRLVGVLYIDLDRFK 403 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 V D E+ I L E + Sbjct: 404 NVNDS--LGHPVGDELLIKLAERMKKR--------------------------------- 428 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMP-VRETK 216 + +L E + + + + L+N+ + Sbjct: 429 ---------VREEDTLARLGGDEFLLVLEDVRDLGDPAFVAQSLINLLTSPFVLPSGHEI 479 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYL--------MSVRMRPGRE 267 + + L+ +D + M G Y + R+ Sbjct: 480 FINASIGISLFPEDASNATELIQHSDMAMYQAKKEGRNTYRYHTEALSVAANERLIMENR 539 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A+ E+ + YQP+VD + V G+E L+RW+ P +PP FI AE +IVPL Sbjct: 540 LRYALSAEELILHYQPLVDARTGYVVGVEALVRWQPPGKAMVPPGKFIPIAEETGLIVPL 599 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + + + A + +N++ SE+ +Q++L + LE Sbjct: 600 GEWVLRTACKQARAWIDAGLSPLVMAVNLSVRQFQSENLVGMVQRILEETQLPADYLELE 659 Query: 388 ITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE ++ E + + L ++GV +AIDDFGTG+S+LIYL+RF +D LKID+ F+ + Sbjct: 660 LTESMFMEHVEQSIETLNKLKTLGVHLAIDDFGTGYSSLIYLKRFPIDKLKIDQRFVRDL 719 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 + + ++ +A+ L + +AEG+E+ EQ +L ++ ++ QGY RP+P + Sbjct: 720 ADDHNDREIAATIIAMARGLKLGVLAEGIESEEQLAFLRQQDCDYYQGYLFHRPVPAIEL 779 Query: 507 VRWLKKPYTP 516 WL++ P Sbjct: 780 EAWLREHSVP 789 >UniRef50_C6ML43 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter sp. M18 RepID=C6ML43_9DELT Length = 773 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 97/466 (20%), Positives = 174/466 (37%), Gaps = 56/466 (12%) Query: 56 TYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEM 113 L + +R L A A +++ F V D ++ Sbjct: 210 ATHDPLTALPNRNLLADRISQALAWAQRHRRWIAVLFVDLDFFKFVNDS--LGHGKGDQL 267 Query: 114 DIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSL 173 + E + + +L Sbjct: 268 LKMVAERLSER------------------------------------------VRQVDTL 285 Query: 174 FYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTW 233 + + + + GN + L + + + + + +Y D Sbjct: 286 AHQGGDKFVVVLTDLRGNEEADRAVHVIREAISLPFLMDGQELVISCSIGITVYPKDGED 345 Query: 234 NDVWYAFLLGGMS-GTVVGLLCYYLMSV--------RMRPGREIMTAIKREQFYVAYQPV 284 M G C+ + RM + + A++ E+F + YQP Sbjct: 346 AQTLVKNAEVAMYRAKEQGRNCFRYYTRELNERVASRMSMEKHLRKALENEEFELWYQPQ 405 Query: 285 VDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEK 344 D R++G+E L+RWR+ G + P +FI AE +IV + + + + Sbjct: 406 ADLNTGRLSGMEGLIRWRNAELGMVQPGSFIPLAEETGLIVQIGEWVVRTACLQNRRWQD 465 Query: 345 VLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLF 403 + +N++P I +L + LEI E ++ + E A + Sbjct: 466 AGLSPLTVAVNLSPRQFRDRELTGVIAGVLRETGLDPRYLGLEIVESMVMHDVESAAAML 525 Query: 404 AWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLA 463 L ++GV++++DDFGTG+S+L YL+RF LKID F+ I T+ ++ + +++++A Sbjct: 526 NELKALGVKLSMDDFGTGYSSLSYLKRFPFAKLKIDLSFVRDIMTDPGSAAIAKSIISMA 585 Query: 464 KRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRW 509 LN+ VAEGVET Q +L G N +QGY++SRPLP +F Sbjct: 586 HNLNLSVVAEGVETEGQLEFLRAHGCNEIQGYYLSRPLPAAEFEGM 631 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 531 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 99/490 (20%), Positives = 177/490 (36%), Gaps = 57/490 (11%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTF 96 ++ ++ L +R + A +++ F Sbjct: 418 RDISERKRFEGELMHMAH-HDALTGLPNRTLFFDRLRQGLYKKERSGKMLAVIYLDLDRF 476 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 ++ D T + + + + + Sbjct: 477 KIIND--TLGHHTGDMLLKEVADRLRGVVRKA---------------------------- 506 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 ++ E + I + ++++V + Sbjct: 507 --------------DTISRLGGDEFTIIIDEIATPADSLLVAEKILHVFSAPFRLEKHEM 552 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYL------MSVRMRPGRE 267 + V LY +D + M ++ +S R+ Sbjct: 553 FITASMGVTLYPNDGDTAEKLLKNADTAMYHAKEEGRNTYQFFSEEMNSRVSERLSMETG 612 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A+ R +F + YQP V+T R+ G+E L+RW+ P G I PDAFI AE +I+P+ Sbjct: 613 LRHALARNEFLLHYQPRVNTTTGRIVGVEALIRWQQPQKGLILPDAFIPLAEETGLIIPI 672 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + + A ++ ++ +NI+ ++ I+ +L + LE Sbjct: 673 GEWVLRNTCTQARAWQEAGFAQMRISVNISCRQFTHDNLPDTIRGILRETGLQPSCLELE 732 Query: 388 ITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 ITE ++ E A L L +G+ IAIDDFGTG+S+L L+R D LKID+ F++ I Sbjct: 733 ITESVIMLNPERAISLLNELKEMGISIAIDDFGTGYSSLSLLKRLPADILKIDKSFVSGI 792 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 ++ ++ L + + VAEGVE EQ +L ER +QGY+ S+PLP + Sbjct: 793 PGNKSDETLVATIINLGHNMGLGLVAEGVERQEQLHFLEERNCQEVQGYYFSKPLPAETL 852 Query: 507 VRWLKKPYTP 516 LK P Sbjct: 853 QPLLKNGTYP 862 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 530 bits (1366), Expect = e-149, Method: Composition-based stats. Identities = 96/468 (20%), Positives = 176/468 (37%), Gaps = 56/468 (11%) Query: 56 TYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEM 113 Y+ L +R Q+ A +++ F + D T S + Sbjct: 426 EYYDPLTGLPNRSLFSDRLKMALAQSKRNNEMCALIILDLDNFKAIND--TLGHSVGDML 483 Query: 114 DIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSL 173 + E I L ++ Sbjct: 484 LKQVAEKIKGY------------------------------------------LREVDTV 501 Query: 174 FYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTW 233 E I + + R++ + + + + + +Y + Sbjct: 502 ARIGGDEFIIIQPQIKDINDATRAADRILKKFQQPWILEGKEYYITASMGIGIYPNGGED 561 Query: 234 NDVWYAFLLGGMS-GTVVGLLCYYLMSV--------RMRPGREIMTAIKREQFYVAYQPV 284 + + +G Y L + R+ + AI++E+F + YQP Sbjct: 562 PQTIFKNADTALYRAKELGRNNYQLYTESMNQKVLQRLDIENSLRRAIEKEEFVLFYQPQ 621 Query: 285 VDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEK 344 +D + ++ G E LLRW HP G +PP FI AE +IV + + + E R + + Sbjct: 622 IDIKTGKIVGFEALLRWYHPDYGLMPPMEFIPVAEDSGLIVVIGEWVLETACRQNKKWIE 681 Query: 345 VLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLF 403 +N++ + I ++ +S + LEITE +++ + Sbjct: 682 CGLEPHLISVNLSARQFQRSNIVEVIDRIRSSTGLAPELLELEITESTAMQDLSFTIDVL 741 Query: 404 AWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLA 463 L G+ +++DDFGTG+S+L YL + +D LKID+ F+ I + + V++LA Sbjct: 742 NQLRKKGIRVSLDDFGTGYSSLNYLRQLPIDTLKIDKSFVQDIRANSKEEAIAKTVISLA 801 Query: 464 KRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 +L++ VAEGVET EQ +L + + QGY S+PLP ++ + L+ Sbjct: 802 HKLDLTVVAEGVETKEQLLFLKKEKCDKAQGYLFSKPLPAEEIEKMLR 849 >UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBG1_BREBN Length = 805 Score = 528 bits (1361), Expect = e-148, Method: Composition-based stats. Identities = 104/489 (21%), Positives = 185/489 (37%), Gaps = 57/489 (11%) Query: 34 VAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSM 91 V ++ YL + L +R ++ +A + Sbjct: 357 VFMIVRDITNKKEYEAKINYLA-FHDSLTGLPNRRFVEQQLDQVIMEAQKTDQQVYVLFL 415 Query: 92 NVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWY 151 ++ F LV D + + + K Sbjct: 416 DLDHFKLVNDS--LGHDFGDLLLQEASLRLRECVGKKG---------------------- 451 Query: 152 RNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMP 211 +++ E + + +S+ ++ + E Sbjct: 452 --------------------TVYRLGGDEFMVILTDVT-EREVSSMANEINETIEQAFFI 490 Query: 212 VRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV-VGLLCYYLM--------SVRM 262 + + Y +D V M G ++L + +M Sbjct: 491 HGHELYITTSIGISRYPEDGQDRSVLMRNADAAMYAAKDKGKNSFHLYVPNLEQAVNDKM 550 Query: 263 RPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQK 322 E+ A+ R++F + YQP V ++ + G+E L+RW HP G + PD FI+ AE Sbjct: 551 NIQNELNRALARQEFLLHYQPQVSAKSGAIVGVEALIRWDHPERGLLLPDQFISVAEETG 610 Query: 323 MIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHF 382 +IVP+ + + + + + ++ +N++ + F I ++L Sbjct: 611 LIVPIGEWVLRTACKQNKQWQDQGLKPLRVAVNLSARQFLKQDFTQMIAEILHQTRLAPE 670 Query: 383 QIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGF 442 + LEITE M+ ATQ L +GV +AIDDFGTG+S+L YL+ F L+ LKIDR F Sbjct: 671 YLELEITESSMIDVHRATQALKELKQLGVHVAIDDFGTGYSSLYYLKEFPLNRLKIDRSF 730 Query: 443 INAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 + + + ++ ++++A L M +AEGVET E+ +L E +QGY SRPLP Sbjct: 731 VRDMIEQPSNQAIVSTIISMAHHLQMHVIAEGVETKEELAFLQEHLCEEVQGYLFSRPLP 790 Query: 503 LDDFVRWLK 511 +D +L+ Sbjct: 791 SEDVAFYLQ 799 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 527 bits (1358), Expect = e-148, Method: Composition-based stats. Identities = 93/407 (22%), Positives = 168/407 (41%), Gaps = 10/407 (2%) Query: 118 NELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSS 177 + L A N V + +L ++ + LLK + + ++ Sbjct: 348 HGLARARRSNSRVALMLLDIDRFKIVNDSLGHDAGDILLKAIAMRLTEGVRDMDTVARLG 407 Query: 178 RQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVW 237 E + I + +++L+ + A + + V ++ +D D Sbjct: 408 GDEFVVVLEGIHDVDDVIFVANKLLATLSRPLDISGHSISATVSIGVSIFPEDGADTDEL 467 Query: 238 YAFLLGGMSGTV---VGLLCYYLMSVR------MRPGREIMTAIKREQFYVAYQPVVDTQ 288 M +Y + + ++ AI++ Q + YQP +D + Sbjct: 468 LKNADIAMYKAKEAGKNNCQFYTKGMNATAVNYLLLENDLRRAIEQNQLALYYQPQIDLK 527 Query: 289 ALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPV 348 +TG+E L+RW+HP G + P FI AE +IVP+ + + + Sbjct: 528 TGDMTGVEALVRWQHPERGLVSPAHFIPLAEETGLIVPIGEWVLREACKQKKIWLDTGKN 587 Query: 349 GVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQ-EATQLFAWLH 407 K +N++P ++F ++ +L + LEITE ++ E L+ Sbjct: 588 VGKVAVNLSPRQFRQKNFPGKVEAILQETGLEAKYLELEITESCAMEHAGETINQLNQLN 647 Query: 408 SVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLN 467 +G +AIDDFGTG+S+L YL+RF + LKIDR FI+ I + + + ++ LA + Sbjct: 648 QMGTFLAIDDFGTGYSSLAYLQRFPIQKLKIDRSFIHDIHDDANDAAIAKTIIGLAHNMQ 707 Query: 468 MLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPY 514 + VAEGVET QA WL +G + +QG+ ++P+ Sbjct: 708 LRVVAEGVETESQAEWLRAKGCDQVQGFLYAKPMTAKQLESHFHNGR 754 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 526 bits (1356), Expect = e-148, Method: Composition-based stats. Identities = 96/488 (19%), Positives = 176/488 (36%), Gaps = 58/488 (11%) Query: 38 KHEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRT 95 K ++ + L YF L +R LQ A +++ Sbjct: 504 KEDITEKKKAEAYTENLA-YFDQLTGLPNRRMLQAQVKYRLNMAQSNHQPLTVMFLDLDN 562 Query: 96 FVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPL 155 F + D + ++ I + + I Sbjct: 563 FKNINDS--LGHTVGDQVLIKIAKRIKK-------------------------------- 588 Query: 156 LKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRET 215 + ++ E N A+ ++ L+ + Sbjct: 589 ----------AIREVDTVSRLGGDEFIMLFPNTDANAAM-HIATTLIQEISKASVVEHNE 637 Query: 216 KIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSVRM------RPGR 266 + + +Y +D M + +++ + Sbjct: 638 LTITPSIGIAIYPNDGNDFKTLLKNAETAMYRVKNDSRNGFHFVTPEMQLSASRNLQLEN 697 Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 + A+KR + + YQP + T ++ G E LLRW HP G I P FI AES I+ Sbjct: 698 ALRHALKRNELQLYYQPQISTSNGQIIGAEALLRWHHPELGMISPAEFIPIAESSGQIIE 757 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 + + + R + +N++ ++ I +L + + + L Sbjct: 758 IGEWVLRTAIRQTKNWMDDGFTPMIIAVNLSVVQFRQKNLLTLITDILAEVQLPNEYLEL 817 Query: 387 EITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 E+TE + + E + H G+ ++IDDFGTG+S+L YL++F + LKID+ FI Sbjct: 818 ELTEAVTMHDPESVINVMNTFHEQGIRMSIDDFGTGYSSLSYLKKFKVYKLKIDQSFIRD 877 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 I + ++ A++ +A L + T+AEGVET EQ +L G + +QGY+ S+PLP + Sbjct: 878 ISNDPDDRAIVSAIIDMASNLGLQTIAEGVETAEQLAFLRLHGCHEVQGYYFSKPLPSVE 937 Query: 506 FVRWLKKP 513 F ++ Sbjct: 938 FEQFRHNH 945 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 526 bits (1355), Expect = e-148, Method: Composition-based stats. Identities = 100/489 (20%), Positives = 180/489 (36%), Gaps = 58/489 (11%) Query: 38 KHEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRT 95 K ++ + + L F L ++ L+ Q A A +++ Sbjct: 856 KEDITEQKQVEARIRQLAH-FDLLTGLPNQTLLKDRAGFAMQMAQRSAHHLAVLFLDIDH 914 Query: 96 FVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPL 155 F + D T E+ + L + + L ++ Sbjct: 915 FKNIND--TLGHRIGDELLVHLAKRMKLLLRDE--------------------------- 945 Query: 156 LKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRET 215 +L E + + + +++ T + Sbjct: 946 ---------------DTLSRFGGDEFILVLPD-TDADGAAHVAEKILETVAKTCYIEQHE 989 Query: 216 KIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSV------RMRPGR 266 + + + +Y D D Y M ++ + R+ Sbjct: 990 LVVTPSIGIAMYPSDGMDFDKLYQSADVAMYRAKQDGRNNFRFFTSEMQARSARRLLLEN 1049 Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 + A+ R QF + YQP + Q ++ G E LLRW HP G I P FI AE +I+ Sbjct: 1050 ALRQALSRNQFELHYQPQISMQDGKIVGAEALLRWYHPELGSISPAEFIPVAEESGLILS 1109 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 + + + + + V IN++ + ++L I L Sbjct: 1110 IGEWVLRTAVQQVKRWQDAGHPPVTVAINLSAVQFRQARLSELVMQILHEANLAPHWIEL 1169 Query: 387 EITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 E+TE + A + LH G+ ++IDDFGTG+S+L YL +F ++ LKID+ F+ Sbjct: 1170 ELTESVAMDNPLVAIGVMNDLHGCGIRMSIDDFGTGYSSLSYLRKFKVNKLKIDQSFVRD 1229 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 + + + ++ A++TLA + T+AEGVET Q +L +G N +QGY+ SRPL + Sbjct: 1230 LADDIESRAIVTAIITLASSMGFQTIAEGVETAGQLAFLRLQGCNEVQGYYFSRPLTVAL 1289 Query: 506 FVRWLKKPY 514 F ++ Sbjct: 1290 FEAFVLGHA 1298 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 100/489 (20%), Positives = 181/489 (37%), Gaps = 57/489 (11%) Query: 38 KHEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRT 95 ++ + Y + L +R + +A + A +++ Sbjct: 391 SRDITLRKEAEERLSYQAS-HDALTGLPNRARFHDRLTHALARAGRDRHEFAILFLDLDR 449 Query: 96 FVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPL 155 F ++ D T + + + V +L GT Sbjct: 450 FKVIND--TLGHTVGDFLL-------------QGVTKRLLGGT----------------- 477 Query: 156 LKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRET 215 + +L E + I G + + R+++V Sbjct: 478 ------------RESDTLARWGGDEFIILLESIRGAEDAAVAARRILDVLAEPFSVQGHE 525 Query: 216 KIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSV------RMRPGR 266 + + +Y D M +Y ++ R++ Sbjct: 526 VFVSGSIGISVYPRDGEDVQALLRCADIAMYRAKDSGKNDYQFYESTMSTGGLERLKLEG 585 Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 ++ A+KR +F + YQP V+ + G E L+RW P G + P FI AE I+P Sbjct: 586 DLRYALKRNEFVLHYQPRVNINTGLIVGAEALIRWDLPDRGLLWPLDFIPLAEESGFIIP 645 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 + + + + + + +N++ ++ + + ++L + L Sbjct: 646 IGEWVLRTACLQCRKWQDAGVPHPRVSVNLSTHQFKKDNLTSTVDRILKETGLSPGLLEL 705 Query: 387 EITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 EITE M++ E A L +GV +AIDDFGTG+S+L YL+RF + LKID+ F+ Sbjct: 706 EITESAMMENLEKAVATLQGLAELGVNVAIDDFGTGYSSLGYLKRFPIGALKIDQSFVRH 765 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 I + + + ++++L K LN+ VAEGVET EQ L + QGY S+P+ D Sbjct: 766 IPSNIDDTAIAMSIISLGKTLNLKVVAEGVETQEQLTVLRNYQCDEAQGYLFSQPVDADR 825 Query: 506 FVRWLKKPY 514 +L P Sbjct: 826 MTEFLVNPS 834 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 98/491 (19%), Positives = 184/491 (37%), Gaps = 58/491 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDRL--QPLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ +L Y L +RL Q ++ AA +++ F Sbjct: 677 DITQIKQSEARLAHLAHY-DALTGLPNRLLVQSRLHHAIERTLRHGNQIAALYLDLDRFK 735 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 V D E+ + L + Sbjct: 736 NVNDS--LGHPIGDELLVMLALRLKKR--------------------------------- 760 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTD-MPVRETK 216 L +L E + I + + + L+++ +P Sbjct: 761 ---------LREEDTLARLGGDEFLVVLEDIKDSNEPAMVAQTLIDLLATPFSLPSGHEI 811 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVV-GLLCYYL--------MSVRMRPGRE 267 + + L+ D M G Y + R+ + Sbjct: 812 FINTSIGISLFPTDANSVTELIQHADMAMYLAKQEGRNTYRYHTDALSIAANERLVLETQ 871 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A+ +F + YQP++D + +V G+E L+RW+ P + P FI AE +IVPL Sbjct: 872 LRQALSAGEFVLHYQPLIDARKGQVMGVEALVRWQPPDKAMVSPGKFIPIAEETGLIVPL 931 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + + + +N++ SE+ I+++L + LE Sbjct: 932 GEWVLRTACAQGRAWMDADFPPLVMAVNLSVRQFQSENLVELIRQVLEETKLPAACLELE 991 Query: 388 ITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE ++ E + ++ L S+GV ++IDDFGTG+S+L YL+RF +D LKID+ F++ + Sbjct: 992 LTESMFMEHAEQSIEILKTLKSLGVRLSIDDFGTGYSSLTYLKRFPIDKLKIDQSFVHGL 1051 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 + + ++ +A+ L + +AEGVE+ +Q L++ G ++ QGY RP+P + Sbjct: 1052 AYDPNDREIAATIIAMARNLKLDVLAEGVESEQQLDILNQHGCDYYQGYLFHRPVPAQEL 1111 Query: 507 VRWLKKPYTPQ 517 W ++ Q Sbjct: 1112 EVWFRENKRNQ 1122 >UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT6_BREBN Length = 816 Score = 524 bits (1351), Expect = e-147, Method: Composition-based stats. Identities = 89/480 (18%), Positives = 182/480 (37%), Gaps = 55/480 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ + + + +YL Y +L +R + + + ++++ + ++ A +++ F Sbjct: 367 DITEENRVKEKIRYLA-YHDELTDLPNRRKFNQVLHQSIEKSSQDSSSFAVMVIDIDRFK 425 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 ++ D S +++ I Sbjct: 426 MINDS--LGHSYGDIFLQGVSDRISKSAKG------------------------------ 453 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 ++ E ++ + +++ + Sbjct: 454 -----------YHATIARMGGDEFTILCETGADGREAASLADKIIEALKQPFTLKDSEFY 502 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMS-----GTVVGLLCYYLMSVRM----RPGREI 268 + ++ D T M G L ++ R++ Sbjct: 503 ISASIGTAIFPDHGTDAVALLKKADTAMYEVKKQGKNGHLFYTTDFDAQLLENIEIERDL 562 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 AI+R++ V YQP +++ R+ G+E L+RW HP G + P FI AE +I + Sbjct: 563 RKAIERKELVVYYQPQFHSESNRMIGVEALVRWNHPTKGMLSPGVFIPIAEETGLIYEIG 622 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + R + + +N++ H + I+ +L + LEI Sbjct: 623 TWVLREACRQMKQWHDKGGPLIPVSVNLSSHQFHQRNLVQYIKNILEETKLAPHFLELEI 682 Query: 389 TERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGT 448 TE M+ + + L+ +G I++DDFGTG+S+L YL++F + LKIDR FI + Sbjct: 683 TESMMMDPAVSISILHELNKIGTRISLDDFGTGYSSLSYLKKFPIHKLKIDRSFITDLSR 742 Query: 449 ETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVR 508 ++ ++++AK L + +AEG+ET +Q L+E +QGY+ SRPL ++ + Sbjct: 743 NENDKAIVATIISMAKHLKLDVIAEGIETKDQLDILTENHCKEIQGYYYSRPLSANEVEQ 802 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 524 bits (1350), Expect = e-147, Method: Composition-based stats. Identities = 99/483 (20%), Positives = 180/483 (37%), Gaps = 55/483 (11%) Query: 38 KHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ + +Y+ Y L + +R L + +A Sbjct: 368 MIDITERKKAEETIRYMAHY-DSLTNLPNRT--LFHEKLAEAM----------------- 407 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 + A ++ + + + + + LL+ Sbjct: 408 -----------------------LKAKQKDEKIGVMFIDLDRFKNINDTLGHSIGDVLLQ 444 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 L S+ E + + + R++ + Sbjct: 445 AVANRLICCLRKEDSVSRLGGDEFAIFLTGVTH-REAGEIAQRIITSMSESITLDHIEIF 503 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMSV--------RMRPGREI 268 + + +Y DD + M G Y S +++ RE+ Sbjct: 504 ITPSIGISMYPDDGDDIEALLKHADAAMYLAKEQGKNNYQFFSEELHQVLAKKLQLEREL 563 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A+ +QF + YQP + Q ++ G+E L+RW HP G IPP FI AE +IVPL Sbjct: 564 RKALDEKQFTLHYQPKIHLQTGQIIGMEALIRWDHPDLGLIPPIQFIPIAEETGLIVPLG 623 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + + ++ + +NI+ + I +L + LEI Sbjct: 624 EWVMRTACQQTKAWQEAGFTQLAVAVNISLRQFMQNNLIEMITSILEETGLAPQYLELEI 683 Query: 389 TERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGT 448 TE L ++ L ++GV I+IDDFGTG+S+L YL +F +D LKID+ F+ + Sbjct: 684 TESMALNVDYTIRILNRLKALGVSISIDDFGTGYSSLSYLSQFPIDRLKIDQSFLRNL-- 741 Query: 449 ETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVR 508 ++ ++ +A + + +AEGVET E +L E+ N +QGY+ S+PLP + Sbjct: 742 NPQNQAIIKTIIHMAHNMKIAVIAEGVETHEHVDFLKEQLCNEVQGYFYSKPLPTKEIDS 801 Query: 509 WLK 511 +L+ Sbjct: 802 FLQ 804 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 524 bits (1350), Expect = e-147, Method: Composition-based stats. Identities = 106/484 (21%), Positives = 185/484 (38%), Gaps = 57/484 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ + ++L T L +R LQ +A +++ F Sbjct: 605 DISQRKQAEERLQFLAT-HDGLTGLPNRTLLQERMELAVLRAQRYQQCVGVLFIDLDRFK 663 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 ++ D T A + + + Sbjct: 664 IIND--TLGHQAGDVLLQEVAGRLGEC--------------------------------- 688 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 L T ++ E V I L + ++M+ + +++ Sbjct: 689 ---------LRQTDTIARQGGDEFVVLVEDFIEQQYLVNVARKIMHALAQPFILMQQELY 739 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMS------VRMRPGREI 268 + + +Y DD M +Y R+ + Sbjct: 740 ISASIGISVYPDDGVDISSLLKNADMAMYRAKDDGKNTFHFYSADGNANSVSRLTLENSL 799 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A++R +F + YQ +D + G E L+RW G + P FI AE MI+ + Sbjct: 800 RRALERNEFSLLYQAKLDLAEQNIIGAEALIRWHSAELGMVSPQDFIPVAEETGMIIEIG 859 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + + RDA ++V ++ G+NI+ +S I L + LEI Sbjct: 860 EWVLQQACRDACHWQEVAGRPIRVGVNISARQFREDSLYQAISNALEESGLTPNCLELEI 919 Query: 389 TERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE +++ E A+Q+ ++G + IDDFGTG+S+L YL+ F +D LKIDR F+ I Sbjct: 920 TESMIMQNAERASQMLQHFRNLGSYVLIDDFGTGYSSLGYLKHFPIDSLKIDRSFVRDIP 979 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 ++ + A++ +A L + VAEGVET Q +L +G + +QGY SRPL ++DFV Sbjct: 980 QDSDDMAITQAIIAMAHSLKINVVAEGVETQAQLEFLRGQGCDQLQGYIFSRPLVVEDFV 1039 Query: 508 RWLK 511 L+ Sbjct: 1040 GLLR 1043 >UniRef50_B7HSZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=5 Tax=Bacillus cereus group RepID=B7HSZ4_BACC7 Length = 925 Score = 523 bits (1348), Expect = e-147, Method: Composition-based stats. Identities = 103/483 (21%), Positives = 190/483 (39%), Gaps = 59/483 (12%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFV 97 +V + + KY YF L +R L+ A A +++ F Sbjct: 490 DVTQRKQMEEEIKY-HAYFDSLTDLPNRVLLKDRLTQGLTYAQLHAEKLAVLYLDLDRFK 548 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 V D T S + + + A Sbjct: 549 FVND--TLGHSFGDLLLREVANRLSACVPKS----------------------------- 577 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 ++ E + I + +R+++ V Sbjct: 578 -------------ATVSRQGGDEFTIYLPNIKSEKEVLKVVNRVIDSFSRPFHLVDNEIY 624 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV-----VGLLCYYLMSVR----MRPGREI 268 + + ++ D+ ++ M + M R ++ ++ Sbjct: 625 MKTSIGISIFPDNGDTTEILVKNADTAMYKSKEISGSSYHFFSEGMDTRTFESIKLENDL 684 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A+++E+ + YQP ++ + ++ G+E L+RW H G IPPD FI AE +IVP+ Sbjct: 685 YKALEQEELVIYYQPQINGKTNKIEGVEALIRWNHQEHGMIPPDKFIPIAEETGLIVPIG 744 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + + R + + +N++ L A ++ +L + I LE+ Sbjct: 745 EWVLKEACRQLKKWHDQGSPLISMSVNLSARQLEQSDLFAMVKNVLEEVELSPKYIQLEL 804 Query: 389 TERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE +++ E+T + L +G+ +AIDDFGTG+S+L YL++ + LKID+ F+ + Sbjct: 805 TENLIVRNTESTLKTMKKLKGLGINLAIDDFGTGYSSLGYLKKLPISTLKIDKSFVQDMT 864 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + + + + ++TLAK LN+ +AEGVET EQ +LS R MQGY+ SRP+ +D Sbjct: 865 KD--DAAITNTIITLAKNLNLDVIAEGVETKEQVEFLSARNCYLMQGYFFSRPMAAEDIE 922 Query: 508 RWL 510 + Sbjct: 923 KLF 925 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 523 bits (1347), Expect = e-147, Method: Composition-based stats. Identities = 102/497 (20%), Positives = 187/497 (37%), Gaps = 63/497 (12%) Query: 38 KHEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRT 95 ++ + L Y L +R A ++ Sbjct: 553 ARDISERRAAEAEIQRLAHY-DQLTGLPNRSLVKDRFRYAASLTQRRRGQLAVMFFDLDH 611 Query: 96 FVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPL 155 F + D T + + + + + + G Sbjct: 612 FKNIND--TLGHDFGDRLLVEVARRL---------ESVLRGGD----------------- 643 Query: 156 LKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRET 215 ++ E + + +++L+ + + Sbjct: 644 ----------------TVCRLGGDEFVFLLPD-TDAEGAARVAAKLLEAVAQPLVLDHQE 686 Query: 216 KIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVV---GLLCYYLMSVR------MRPGR 266 + + +Y DD T D M ++ +++ + Sbjct: 687 LTVTPSIGIAMYPDDGTDFDTLSRNADAAMYQAKREGRNGFRFFTEAMQARSTRTLLLAN 746 Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 + A+ R QF + YQP V RV G E LLRW HP G + P F+ AES +I Sbjct: 747 ALRHALDRGQFSLHYQPQVSLADGRVVGAEALLRWTHPEFGPVSPGEFVPIAESNGLIAQ 806 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 + + + + + +N++ + + + +++ Q+ L Sbjct: 807 IGEWVLREAVAQSRRWLDEGLPPLVMAVNLSAAQFRNPNLPELVSQVIEEAGLPPHQVEL 866 Query: 387 EITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 E+TE + + + A ++ L + G+ ++IDDFGTG+S+L YL+RF + LKID+ F+ Sbjct: 867 ELTEAVAMDDPQSAVRVMDALFARGIRMSIDDFGTGYSSLGYLKRFKVGKLKIDQSFVRD 926 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 IG + ++ A++ LA L MLTVAEGVET +Q +L ++G + +QGY+ SRPLP + Sbjct: 927 IGDDPDDKAIVSAIIHLAGSLGMLTVAEGVETLDQLDFLRQQGCDTVQGYYFSRPLPAEA 986 Query: 506 FVRWLKK-----PYTPQ 517 FV +L++ P PQ Sbjct: 987 FVGYLQESGALTPSPPQ 1003 >UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter sulfurreducens RepID=Q74BV5_GEOSL Length = 660 Score = 522 bits (1346), Expect = e-146, Method: Composition-based stats. Identities = 109/485 (22%), Positives = 181/485 (37%), Gaps = 45/485 (9%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDRLQP--LTLDTCQQANPELTARAAFSMNVRTF 96 H++ TL + +YL L + +R Q A A +++ F Sbjct: 205 HDITERTLAEERIRYLAH-HDTLTALPNRFQFEERMEQALAFAQRNGFMMAVLFLDLDHF 263 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 V D T A + + + Sbjct: 264 KKVND--TLGHHAGDRLLQEAAGRLMKCLRRSD--------------------------- 294 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 + A + +P + E + + + S R++ + Sbjct: 295 ---TLTHASREDASPFISRMGGDEFTILLTDLAHPQDAARVSQRIITALSKRYVIGGHEV 351 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSV------RMRPGRE 267 G + + L+ D D M YY S+ R+ Sbjct: 352 FVGASIGISLFPSDGEDCDQLLRNADTAMYHAKELGRNTYQYYSGSMNAMALERLTLENN 411 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A+KR +F + YQP +D + RV G+E LL W P +PPD FI AE +I + Sbjct: 412 LRWALKRNEFRLCYQPQLDAASGRVVGMEALLSWHRPGCDVVPPDDFIPLAEETGLIASI 471 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + + A V+ +N++ S ++K+L + + LE Sbjct: 472 GEWVLWNACAQAVTWLHEGLPPVRVAVNLSSLQFRSRRLAELVRKVLRATGLPPSHLELE 531 Query: 388 ITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 ITE + +E A + L +GV ++DDFGTG+S+L L RF LD LKIDR F+ I Sbjct: 532 ITEGVFMSNEEDAAVVIRDLKKMGVRFSVDDFGTGYSSLSRLSRFPLDALKIDRSFVRDI 591 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 + + + A++ +A+ L + +AEGVET EQ +L G +QG+ S+PL D Sbjct: 592 SADPAAAGLTAAIIAMARNLGLNVIAEGVETHEQFAFLRANGCAEVQGFLFSQPLNPDAA 651 Query: 507 VRWLK 511 +L+ Sbjct: 652 AAFLR 656 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 102/492 (20%), Positives = 192/492 (39%), Gaps = 11/492 (2%) Query: 34 VAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAFSMNV 93 + + + D A ++ + + + +M + Sbjct: 329 QLAIRENRTVGLAADSILIHRDGLEAAIEDSAAPIHNRDGQVAGAVIVFHDVSESRAMAL 388 Query: 94 RTFVLVKDKKTFCSSATGEMDIPLNELI-PALDINKNVDMAILPGTPMVPNKPAIVIWYR 152 + L + + L+ I A NK V M L ++ Sbjct: 389 KMAHLAQHDFLTGLPNRALLTERLSRAIGQARRHNKRVGMLFLDLDYFKHINDSLGHAVG 448 Query: 153 NPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPV 212 + LL+ + + T ++ E +A I + + +L+ + Sbjct: 449 DQLLQQVAERLIVCIRDTDTVCRQGGDEFVILLAEIEQARDAAPIAEKLLAAFAEPCLIA 508 Query: 213 RETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSV------RMR 263 + + + +Y DD D M ++ + R+ Sbjct: 509 GNELHVSLSIGISIYPDDGMDADTVMKNADTAMYHAKANGRNNYQFFTTEMNTRAVRRLF 568 Query: 264 PGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKM 323 + A+++ +F + YQP +D + + G E L+RW+ P G + P F+ AE + Sbjct: 569 IEGNLRRALRQGEFMLYYQPKIDLASGMMIGSEALIRWQDPEHGLVYPKQFVPIAEESGL 628 Query: 324 IVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQ 383 IVP+ + R ++ V V +NI+ + F + +L Sbjct: 629 IVPIGSWVLREACRQVRAWQESGLVAVPVSVNISAVEFRHKDFLEGVALILKETGMLPSY 688 Query: 384 IVLEITERDMLKEQEATQL-FAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGF 442 + LE+TE ++ + E++ L ++G+++AIDDFGTG+S+L YL+RF ++ LKID+ F Sbjct: 689 LELELTESILMHDAESSATVLEALKTMGMQLAIDDFGTGYSSLSYLKRFPINTLKIDQSF 748 Query: 443 INAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 ++ I + + ++ A++ + K L VAEGVET EQ +L + QG+ RPLP Sbjct: 749 VHDIAIDPDDASIVGAMIGMGKNLKQRVVAEGVETEEQLAFLRTLHCDEGQGFLFGRPLP 808 Query: 503 LDDFVRWLKKPY 514 D+F R L Sbjct: 809 ADEFARLLLNDR 820 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 93/425 (21%), Positives = 184/425 (43%), Gaps = 24/425 (5%) Query: 112 EMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT- 170 P+ L ++ + +AI + + N + A+ L Sbjct: 527 AYHDPVTGLPNRTLLHDRLQLAINRAERDSQGVAILFLDLDRFKAINDSLGHAMGDQLLR 586 Query: 171 -------------PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 ++ E ++ + + A+ + +++ Sbjct: 587 LVGNRLLDCVRSSDTVARLGGDEFVVLISALDNDHAVGSVVMKILEQLCEPYQIDDHEVY 646 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYL------MSVRMRPGREI 268 + + L+ D + M ++ + R+ + Sbjct: 647 TSSSIGISLFPRDGRDAEELLKNADMAMYQAKEAGRNTCHFFSPELNMRATERLLLESTM 706 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A++RE+F++ YQP ++ ++ + G+E LLRWRHP G +PP+ FI AE +IVPL Sbjct: 707 RRALEREEFFLVYQPQMELRSGHIAGIEALLRWRHPDLGVVPPNNFIPIAEETGLIVPLG 766 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + R A ++ ++ +N++ + I+K+L + LE+ Sbjct: 767 EWVLAEACRQAVRWQQEGQPPLRMAVNVSARQFRQRNLGLRIEKILMETGLDPALLELEL 826 Query: 389 TERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE +++ EA L +G+ ++IDDFGTG+S+L +L+ F +D LKIDR F+ + Sbjct: 827 TESAVMENPEEAILTLRQLKKMGITLSIDDFGTGYSSLSHLKHFPIDRLKIDRSFVKHVT 886 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + + + +A++ LA + + VAEG+E EQ ++ +R + MQGY++SRP+ ++F Sbjct: 887 RDHNDATIAEAIIALAHSMKLTVVAEGIEHSEQMEFMHQRHCDTMQGYYLSRPVTAEEFG 946 Query: 508 RWLKK 512 +LK+ Sbjct: 947 TFLKR 951 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 97/394 (24%), Positives = 171/394 (43%), Gaps = 10/394 (2%) Query: 132 MAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGN 191 + + ++ + LL+ + ++ T +L E + I Sbjct: 394 LLFIDLDRFKHINDSLGHEIGDQLLQEVAKRLSTSIRKTDTLARMGGDEFLIIIEDIKEL 453 Query: 192 TALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS---GT 248 + +ST + ++ + + + + D AF M G Sbjct: 454 SHVSTVAKNFIDTILPSFTIDGHELFITPSMGISIAPTDTQHPKELLAFAEIAMYQAKGL 513 Query: 249 VVGLLCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWR 302 +Y + R+ + A+ ++QF + YQP D Q+ + G E LLRW+ Sbjct: 514 GGNKCQFYTAEMNSRAKTRIELESYLRKAVNQDQFVLYYQPQFDIQSGELVGCEALLRWQ 573 Query: 303 HPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLH 362 HP G I P+ FI AE +I+ + + + + + + ++ +NI+P Sbjct: 574 HPQMGMISPNDFIPLAEETGVIIEIGEWVLQEACLQNKKWQDAGHSPIRVAVNISPRQFR 633 Query: 363 SESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTG 421 F I++++ + + LEITE ++ + + A + L + G+ +AIDDFGTG Sbjct: 634 EPGFLEMIERVVQTTGIKPEWLELEITESLLMDDIDSAINILKQLKAKGIHLAIDDFGTG 693 Query: 422 HSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQA 481 +S+L YL+RF L LKIDR F+ I T+ + + AV+ LA +N+ VAEG+ET EQ Sbjct: 694 YSSLSYLKRFPLSRLKIDRSFVRDITTDDNDASITKAVIALAHSMNLKVVAEGIETQEQL 753 Query: 482 RWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYT 515 +L E+G QGY S P+ + F + Sbjct: 754 LFLKEKGCEVGQGYLYSPPVAKEPFDHFFTDGSP 787 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 521 bits (1342), Expect = e-146, Method: Composition-based stats. Identities = 94/505 (18%), Positives = 189/505 (37%), Gaps = 58/505 (11%) Query: 22 MIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQA 79 ++AI+ + + + E + ++ + Y L +R + A Sbjct: 428 VLAIMAARVSAEIEREISEQRLRDNEDHLEYLV--YHDVLTDLPNRQLFRDRLQHAISMA 485 Query: 80 NPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTP 139 + +++ F + D + + + + G Sbjct: 486 SLGQHQVGVLFIDLDHFKKINDS--LGHEVGDRLLCEVARRLRLC----------IGG-- 531 Query: 140 MVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSS 199 ++ S E + + + + Sbjct: 532 ------------------------------LDTVARLSGDEFAIILDQLNNIENVILIAQ 561 Query: 200 RLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-----GTVVGLLC 254 + + + + LY D M G Sbjct: 562 EVNRRLAEMMVVEGYKLFLTASIGISLYPGDGKDVVSLLKCADAAMFKAKELGRDNYRFY 621 Query: 255 YYLMSVR----MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIP 310 ++ R + + A+ + V +QP V+ + R+ G E L+RW+HP G I Sbjct: 622 TAGLNERASELLALEGALRQAVDKNHLVVYFQPQVELASRRIIGAEALVRWQHPENGMIS 681 Query: 311 PDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADI 370 P FI AE +IV + + + A + + ++ +N++ + + Sbjct: 682 PVDFIPMAEETGLIVSIGEWVLRQSCLQARQWQVAGYPPMRISVNMSARQFRQKDLVPMV 741 Query: 371 QKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLE 429 +++L + LEITE ++ + + A + LHS+G++++IDDFGTG+S+L YL+ Sbjct: 742 RRILQETGLSPEYLDLEITESILMNDVDGAVERLVELHSLGIQLSIDDFGTGYSSLAYLK 801 Query: 430 RFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGV 489 +F + YLKIDR F+ + + + + AV+ LA+ +N+ +AEG+E +Q ++L +RG Sbjct: 802 KFPIQYLKIDRSFVRDVIIDPNDAAIATAVIDLARNMNLNVIAEGIEQQDQHQFLLDRGC 861 Query: 490 NFMQGYWISRPLPLDDFVRWLKKPY 514 + QGY SRP+P +F + L + Sbjct: 862 GYGQGYLFSRPIPAHEFEQLLVRQQ 886 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 520 bits (1340), Expect = e-146, Method: Composition-based stats. Identities = 95/476 (19%), Positives = 175/476 (36%), Gaps = 60/476 (12%) Query: 58 FADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDI 115 L +RL T ++ + A +++ F ++ D + Sbjct: 286 HDALTELPNRLLFHDRLNQTLVESADSGSIVAVLIVDLDRFKVINDSM--GHEVGDSLLC 343 Query: 116 PLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFY 175 + + A+ K +L Sbjct: 344 EVATRLRAICPAK------------------------------------------ATLAR 361 Query: 176 SSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWND 235 E + + N + + ++ G + + +Y D Sbjct: 362 LGGDEFGIVLPNMTQNRDAALLAQEVLTRVAQPITISEVEFAVGASIGMTVYPLDGEKPS 421 Query: 236 VWYAFLLGGMSGTV---VGLLCYYLMS------VRMRPGREIMTAIKREQFYVAYQPVVD 286 V M +Y R+ + A+ R++F + YQP ++ Sbjct: 422 VLMRNAESAMYHAKQSGRNNFQFYRSELNTASLARILLESGLRNAVDRQEFLLFYQPQME 481 Query: 287 TQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVL 346 ++ G+E L+RW+HP G + P FI AE +++P+ Q + R + Sbjct: 482 LATGKLIGMEALIRWQHPEQGMVSPGEFIPLAEETGLVIPMGQWALKEACRQSKVWMDQT 541 Query: 347 PVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKE-QEATQLFAW 405 V ++ +N++ F + + + + LE+TE + + +E + Sbjct: 542 GVPLRISVNLSGIQFRLPDFTEMVMRTVGESGLPPHCLELELTESIAMGDVEETLEKLTI 601 Query: 406 LHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKR 465 L GV +AIDDFGTG S+L YL++F +D LKID+ F+ + + ++ A + LA Sbjct: 602 LSRFGVLLAIDDFGTGFSSLSYLKKFPIDTLKIDQSFVRNCTRDPEDAAIIRAFINLAHS 661 Query: 466 LNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL----KKPYTPQ 517 LN+ +AEGVE EQ +L++ + +QGY+ RPL D F ++ K PQ Sbjct: 662 LNLEVIAEGVEHLEQLEFLAQESCDEIQGYFYGRPLSGDKFEMFMLDAFAKKAQPQ 717 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 109/479 (22%), Positives = 184/479 (38%), Gaps = 59/479 (12%) Query: 52 KYLDTY--FADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCS 107 + ++ Y F L +R L + A +++ F + D T Sbjct: 587 EQIERYAHFDALTGLANRHALYRRLGQAITSVHQHQHPLAVLFVDLDKFKTIND--TLGH 644 Query: 108 SATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNL 167 + + + + + +A L G + P Sbjct: 645 AVGDVVLREVAGRLSDF-AGPDDILARLGGDEFLLVLPG--------------------- 682 Query: 168 NLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLY 227 A S ++ ++ + + V LY Sbjct: 683 ---------------------ADERAASEVAACILTAMSVPVRVDGRELPTTPTIGVSLY 721 Query: 228 ADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMS--------VRMRPGREIMTAIKREQFY 278 D D M G + L + R++ E+ A R + Sbjct: 722 PRDGEEADDLIRNADIAMYQAKARGRNTFQLYTPDMNAAAAERLQLQGELRNAHLRGEIM 781 Query: 279 VAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARD 338 + YQP +D V G E L+RW+HP G + P FI AE +I+ L R Sbjct: 782 LHYQPQIDVTDGHVVGCEALMRWKHPTLGMVSPGRFIPLAEESGLIITLGNWAIREACRQ 841 Query: 339 AAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE 398 A ++ + +N++ +F A + L + LE+TE ++ + E Sbjct: 842 AMVWQRAGLPPLTVAVNLSGCQFQQSNFTAVVADALADTSLPPQYLELELTESIVMHDVE 901 Query: 399 -ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLD 457 L ++GV+++IDDFGTG+S+L YL+RF +D LKID+GF+ + T+ + ++ Sbjct: 902 QVIATLTELKALGVQLSIDDFGTGYSSLNYLKRFPVDLLKIDQGFVRDVETDPSDAAIVR 961 Query: 458 AVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTP 516 A++ L K LN+ +AEGVET Q +L GV+F+QGY+ SRPLP +D +L + P Sbjct: 962 AIIALGKILNLRLIAEGVETQGQLDYLHAAGVDFIQGYYFSRPLPAEDMATYLAQRLLP 1020 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats. Identities = 102/490 (20%), Positives = 177/490 (36%), Gaps = 58/490 (11%) Query: 33 LVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQP--LTLDTCQQANPELTARAAFS 90 + ++ + L F L +R + A + A Sbjct: 410 HYLAIEEDITNQKNAQARIESLAH-FDVLTGLPNRALLDERAQRALRLAEEDQATLAVMF 468 Query: 91 MNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIW 150 +++ F + D T + + + L + + A+ Sbjct: 469 LDLDHFKNIND--TLGHNLGDTLLVELAQRLRAVLRRD---------------------- 504 Query: 151 YRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDM 210 +L E + + + LM Sbjct: 505 --------------------DTLSRLGGDEFVLLLPGA-NRESAKKIAQELMRAINEPYR 543 Query: 211 PVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVV-GLLCYYLMSVRMR------ 263 + + +Y D + M G Y + M+ Sbjct: 544 IGSHELNVMASIGIAVYPADGMDFETLCKNADVAMYRAKQEGRNAYRSFTQEMQAYSTRY 603 Query: 264 --PGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQ 321 + AI +EQ +V YQP + + V G E LLRW HP G I P FI AE Sbjct: 604 LQVLNALRQAIAQEQLHVHYQPQISLISGDVIGAEALLRWHHPELGNISPAEFIPIAEES 663 Query: 322 KMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHH 381 +I+ + + + + A + ++ + +N++ + ++L Sbjct: 664 GLILQIGEWVLRVAVAQAKKWHQLGLDKLIIAVNLSAVQFRHAGLPNLVMQILKEEDFPP 723 Query: 382 FQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDR 440 + LE+TE + + + A + LH GV ++IDDFGTG+S+L YL++F LKID+ Sbjct: 724 QYLELELTEGVAMHDPQGAIAMMNSLHERGVRMSIDDFGTGYSSLSYLKQFKAYKLKIDQ 783 Query: 441 GFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRP 500 F+ I T+ ++ A++ +AK L + T+AEGVET EQ +L E G + QGY S+P Sbjct: 784 SFVRDISTDAEDKAIVSAIIGMAKNLGLQTIAEGVETAEQQAFLREEGCHEAQGYHYSKP 843 Query: 501 LPLDDFVRWL 510 LP DF ++ Sbjct: 844 LPAADFETFI 853 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats. Identities = 96/424 (22%), Positives = 179/424 (42%), Gaps = 24/424 (5%) Query: 117 LNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT------ 170 L L L +N ++ A+ + + + N + + L Sbjct: 327 LTGLPNRLLLNDRLNQALTIARRDQEFIALMFLDLDHFKNINDSLGHEVGDQLLKMVARR 386 Query: 171 --------PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPL 222 ++ E + + + + + +L+ + + Sbjct: 387 LESCLRASDTISRQGGDEFMILLPELTNYFSPAEVAEKLLAAATVPYEIGSHEITVSASI 446 Query: 223 TVRLYADDWTWNDVWYAFLLGGMS-----GTVVGLLCYYLMSVRM----RPGREIMTAIK 273 + ++ DD ++ M G M+ R+ ++ A++ Sbjct: 447 GIAVFPDDGENGELLTKNADAAMYHAKSLGRNNYQFFTRAMNERVMEIAELESKLRRAVE 506 Query: 274 REQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFE 333 R +F + YQP +D + +V G E L+RW+HP G + PD FI AE +I P+ + Sbjct: 507 RNEFVLYYQPKIDIRTGQVVGAEALIRWQHPSWGLVAPDRFIPIAEDSGLIRPIGLWVMR 566 Query: 334 LIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDM 393 R E + + +N++ L +F ++ ++L + LE+TE Sbjct: 567 EACRQNQEWQAAGLARIPVAVNLSTVQLRQHNFLQEVSEILLMSGLEPDYLELEVTESVA 626 Query: 394 LK-EQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETIT 452 + E E L S+GV++A+DDFGTG+S+L YL+R ++ +KID+ FI I T+ Sbjct: 627 IHAETEVINWLHKLRSMGVKLALDDFGTGYSSLSYLKRLPINNVKIDKSFIRDIETDPDD 686 Query: 453 SPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 + ++ A++ ++ L + +AEGVE Q +L + G + MQG+ SRP+P D+F L+ Sbjct: 687 ATIITAIIRMSHGLRLNVIAEGVENINQLEFLKKEGCDQMQGFIASRPVPADEFALLLQN 746 Query: 513 PYTP 516 TP Sbjct: 747 WPTP 750 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 517 bits (1332), Expect = e-145, Method: Composition-based stats. Identities = 98/487 (20%), Positives = 194/487 (39%), Gaps = 57/487 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ + + +YL T +L +R + A A +++ F Sbjct: 259 DISERKINEEQLEYLAT-HDELTGLANRALFHDRLEQSLHYAKRSGRIVAVLLLDLDRFK 317 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 ++ D S + + + + +V + Sbjct: 318 IINDS--LGHSFGDRLLSAVAQRL----------------DRVVRD-------------- 345 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 T ++ E +A + + +SR+++ + + Sbjct: 346 ------------TDTVARLGGDEFVLLLAEVTEPDDVGLLASRILHELAVPHRIEGREIV 393 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVV---GLLCYY--LMSVR----MRPGREI 268 L + LY D M G+ +Y M+ R M + Sbjct: 394 MSASLGISLYPKDSGDGSTLIRNADIAMYRAKQEGGGVFSFYAPEMNQRAMETMEIESAL 453 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A++R +F + YQP VD + R++G E L+RW HP G + P FI AE +IVP+ Sbjct: 454 RLALERGEFTLYYQPKVDLASGRISGCEALIRWLHPRRGVVAPADFIPLAEETGLIVPIG 513 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + R + +N++ + ++++L + LE+ Sbjct: 514 TWVLKEACRQVRAWQAEGVPIANVAVNLSARQFRTGDLPGLVREVLGETGLDPHLLELEM 573 Query: 389 TERDML-KEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE ++ + + L ++GV +++DDFGTG+S+ +L F +++LKIDR FI I Sbjct: 574 TESMVMADHAQVVAVMEELTAIGVRLSLDDFGTGYSSFAHLSHFPINHLKIDRSFIKQIV 633 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 T+ ++ + +++ +A R+ + +AEGVET Q +L ++G + +QGY +SRPLP ++ Sbjct: 634 TDPNSATIATSIIAMAHRMRLKAIAEGVETEAQLAYLRKQGCDEIQGYLLSRPLPASEYA 693 Query: 508 RWLKKPY 514 +++ Sbjct: 694 ALVRRDA 700 >UniRef50_B5E7Y8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacter RepID=B5E7Y8_GEOBB Length = 704 Score = 516 bits (1331), Expect = e-145, Method: Composition-based stats. Identities = 109/488 (22%), Positives = 182/488 (37%), Gaps = 45/488 (9%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTF 96 ++ + + L Y+ L +R AN A +++ F Sbjct: 250 QDITERKRAEEQIRLLA-YYDALTGLPNRRFFLQQLEQALVFANRYDRMLAVLFLDLDRF 308 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 LV D T + + + + + + +A P P++V Sbjct: 309 KLVND--TLGHGVGDRLLQDVADRLLRC-VRRGDCLAR--ADEECP--PSLV-------- 353 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 E ++ I ++ + R++ + + Sbjct: 354 -----------------SRLGGDEFTIMLSDIEHFQDVAKIARRILEAVSVPYSLEGQEV 396 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMSV--------RMRPGRE 267 + + LY D T G M G Y + R+ + Sbjct: 397 FVSTSIGISLYPFDATTASDLIRNADGAMYQAKEQGRNGYQIYDESMNAKALERIILESQ 456 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A+K E+F V YQP V Q+ RV G+E L+RW G + P F+ AE +++ + Sbjct: 457 LHKALKEEEFIVYYQPQVSNQSGRVVGIEALVRWNSKELGLVEPGRFLPLAEEIGLVIQI 516 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 Q + R V INI+ + +L + LE Sbjct: 517 DQWVMREACRQHKLWLDAGFPPVTLAINISGQQFMKNELLETVTSVLKESGLDPGLLELE 576 Query: 388 ITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE ++ E + L +GV +AIDDFGTG S+L YL+RF LD LKIDR FIN I Sbjct: 577 LTEGVLMAHTERTVKTLQALKGMGVRLAIDDFGTGFSSLSYLKRFPLDVLKIDRTFINDI 636 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 T+ + + A + +A + + +AEGVET Q +L++ G + QGY S+P+P + Sbjct: 637 TTDPDDAAITLATIEMAHTMKLKVIAEGVETKPQLDFLTKNGCDMYQGYLFSKPVPSTEL 696 Query: 507 VRWLKKPY 514 R + Sbjct: 697 PRLFNRWQ 704 >UniRef50_A0LH12 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LH12_SYNFM Length = 702 Score = 515 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 101/490 (20%), Positives = 178/490 (36%), Gaps = 45/490 (9%) Query: 38 KHEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRT 95 +V + L Y L ++ ++ + A +++ Sbjct: 244 MRDVTERRKMEKELLQLA-YHDPLTGLLNQHSMRERIARALELPGQHGRMTAILWVDIDH 302 Query: 96 FVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPL 155 V TF + + + + + A L + Sbjct: 303 LKRVN--ATFGHELGDVLLQRVADRMLGCARRTDRK-ARLGSDQSIK------------- 346 Query: 156 LKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRET 215 ++ + + I + + RL++ + R Sbjct: 347 ----------------AVARMGGDDFVVLLTEISHVKGAANLAKRLLDDLSQPFVLDRHE 390 Query: 216 KIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMS------VRMRPGR 266 + + ++ D M +Y S + Sbjct: 391 VYVTASIGIAVHPHDGAEAGTLLKNADSAMHHAKAEGRNNFQFYTSSGKTAALRSLTLEG 450 Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 ++ A+ R + +V YQP +D + GLE L+RW HP G IPP FI AE +I+P Sbjct: 451 DLRMALARRELFVEYQPEIDLKTGETVGLETLVRWDHPTLGLIPPLDFIPLAEETGLILP 510 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 + + + + A K ++ +N++ + I K LT+ + L Sbjct: 511 IGEWILSIACMQNAIWHKSGLEPIRVAVNLSGHQFRQRNLIKTIAKTLTNSRLDPQHLEL 570 Query: 387 EITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 EITE +++ L S+GV +A+DDFGTG+S+L YL RF LD LKIDR FI Sbjct: 571 EITESTLMENAASTIHTVKELKSMGVRLAVDDFGTGYSSLSYLRRFPLDVLKIDRSFIRD 630 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 + + + A++ +A LN+ +AEGVE +Q ++L E + QGY+ RPL Sbjct: 631 VTINADDAAITRAIIAMAHNLNLEVIAEGVENEQQLQFLQENNCDMAQGYYYCRPLTPAK 690 Query: 506 FVRWLKKPYT 515 + L+K + Sbjct: 691 LTKHLEKQSS 700 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 515 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 92/484 (19%), Positives = 183/484 (37%), Gaps = 58/484 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDRL--QPLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ L + L L +R+ Q ++A T A +++ F Sbjct: 606 DITERKLFEEHIYNLAH-HDSLTQLPNRVAFQLQMNTALERAKRSKTQMAVMFIDLDHFK 664 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 ++ D + + E ++V Sbjct: 665 MINDTS--GHPVGDLLLQQVAERFKRALRKEDV--------------------------- 695 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 + E ++ + A + + +L+ + Sbjct: 696 ---------------ISRFGGDEFTVLLSNTRTDNATTVVARKLLACFYEPFKLPSSEVV 740 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMS--------VRMRPGREI 268 + + ++ D+ D M G C+ + R+ ++ Sbjct: 741 ISASIGIGVFPDNGDSVDSLMMNADSAMYRAKEKGRNCFQFYTKEMNQYAQERLELELDL 800 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A++R++F + YQP D R+ G E L+RW+HP G + P FIN AE +IVP+ Sbjct: 801 RKALERDEFVLHYQPQFD-PNGRIIGCEALIRWQHPDKGLLSPGEFINMAEITGLIVPIG 859 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + + + +N++ ++ +T+ + LE+ Sbjct: 860 KWVIDTACMQHKMWLSQGYPALNISVNLSGRQFLHHDLLETVKNAITTSGITPSCLELEL 919 Query: 389 TERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE M+ +E + + S+G+ ++IDDFGTG+S++ L+RF ++ LKID+ F+ + Sbjct: 920 TESIMMVNVEETIRTLNAISSLGIHMSIDDFGTGYSSMSCLKRFPVNKLKIDQSFVRGLP 979 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + ++ +++ +A LN+ +AEGVET EQ +L QGY+ SRP+ D Sbjct: 980 QDKEDVAIVKSIIVMAHALNLTVIAEGVETLEQLEFLKSSRCEEFQGYYFSRPILAADIE 1039 Query: 508 RWLK 511 ++L+ Sbjct: 1040 QYLQ 1043 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 515 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 99/486 (20%), Positives = 194/486 (39%), Gaps = 58/486 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ + + ++L F L + ++ L T A TA +++ F Sbjct: 890 DISERKVAEERIQFLSN-FDPLTNLPNKNLLNDRTKLALATAKRLKTAVTLMFVDLDRFK 948 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 + + S ++ L E A + Sbjct: 949 FINES--LGPSIGDQVVKELAERFVAYMRPE----------------------------- 977 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 ++ E + + + +L+++ + + Sbjct: 978 -------------DTVCRQGGDEF-ILLLPNTDAEGAAHVAKKLLDIVAQPFNFHGQKIV 1023 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVV-GLLCYYLMSVRMR--------PGREI 268 + + Y D + + G + + +M E+ Sbjct: 1024 LTASIGISAYPQDGESFEQLAQSADAALYRAKYEGRNNFQFFARQMHEQAHDILLLESEL 1083 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 +AI+ E+F + YQP D++ ++ GLE L+RW+HP G + P FI AE +I + Sbjct: 1084 RSAIEHEEFLLYYQPQYDSKTSKIIGLEALIRWQHPEKGLVSPAVFIPIAEESGLIAEIG 1143 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + A ++ V +N++ H ++ + ++L + LE+ Sbjct: 1144 DWVLRTAVKQLASWQEAGLGAVPVAVNLSVVQFHQDTLYGSVCQILRDTKVDPSMLELEL 1203 Query: 389 TERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE +++ E + L+S+GV ++IDDFGTG+S+L YL++F +D LKID+ F+ IG Sbjct: 1204 TEGIAMEDSERTLNVLNQLNSLGVRLSIDDFGTGYSSLSYLKKFKIDKLKIDQSFVRGIG 1263 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + + ++ A++++AK L+ T+AEGVET EQ +L + +QGY+ S+PLP + Sbjct: 1264 SHPQDAAIITAIISMAKSLSFKTIAEGVETLEQLNFLIANSCDEIQGYYFSKPLPSTEVT 1323 Query: 508 RWLKKP 513 + L Sbjct: 1324 KLLANQ 1329 >UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNY7_9PROT Length = 1003 Score = 515 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 97/489 (19%), Positives = 187/489 (38%), Gaps = 47/489 (9%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTF 96 ++ + + L YF L +R +A A +++ F Sbjct: 511 RDITLQKHSEEKIRRLA-YFDTLTGLPNRQSFLERLDRELLRARRTNHRMALLFLDLDGF 569 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 + D T SA + + + + + +A + Sbjct: 570 KRIND--TLGHSAGDCLLQTVADRLQE-KLRAGAFIARPALDESSLH------------- 613 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 E + + + R+ + + + Sbjct: 614 ----------------FARLGGDEFTVVLPDVDTVETACLIAQRIQELLGRPTLIGEQEI 657 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMSVRMRP--------GRE 267 + + L+ DD M G + L + + Sbjct: 658 AVTSSIGIALFPDDGADAATLLKHADTAMYYAKEQGRNNWQLYDRTLTTRTTARLALEGD 717 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 I ++R +F + YQP V + G+E L+RW+HP G + P FI AE +IVP+ Sbjct: 718 IRKGLERGEFRLFYQPQVSADDGTIVGVEALIRWQHPQQGLVSPARFIPVAEESGLIVPI 777 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + + R + ++ + +N++ L + F + ++ + ++ LE Sbjct: 778 GEWVLTAACRQVRQWQQSGVPVPRVAVNVSARQLGAAGFLDTVAAIIVATGIAADRLELE 837 Query: 388 ITERDMLKEQEATQL--FAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 +TE ++ + EA ++ + L ++GV +IDDFGTG+S+L Y++RF + LKID+ F++ Sbjct: 838 LTESILM-DPEAKRIKGLSRLRAMGVHFSIDDFGTGYSSLSYIKRFPIGTLKIDQSFVHG 896 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 + + + + A++++A+ LN+ VAEGVET EQ +L +QGY S PLP D+ Sbjct: 897 LPQDADDAGITTAIISMARSLNLEVVAEGVETREQLAFLQRALCPKLQGYLFSYPLPPDE 956 Query: 506 FVRWLKKPY 514 L++ Sbjct: 957 MEAILRRGR 965 >UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F127_9PROT Length = 529 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 109/470 (23%), Positives = 188/470 (40%), Gaps = 56/470 (11%) Query: 58 FADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDI 115 + + DR Q + + A + +++ F ++ D + + Sbjct: 102 YDQNTNLPDRNMFQHILAQEQENAKRKHFQLGVLYIDIDHFKVINDSFGY--LKGNLLLG 159 Query: 116 PLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFY 175 + E AL + N +A L G Sbjct: 160 QVAERFKAL-LRGNDLIASLGGNR------------------------------------ 182 Query: 176 SSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWND 235 + + + + +LM E + I + ++ D ++ Sbjct: 183 -----FVVLLTGLAHPEDATIVTLKLMQALESGFCIDNHEVVMTISTGIAIFPGDGDDSE 237 Query: 236 VWYAFLLGGMSG-TVVGLLCYYLMSV--------RMRPGREIMTAIKREQFYVAYQPVVD 286 M G Y R+ E+ AI+R +F + YQP ++ Sbjct: 238 ALLQSAEQSMYSVKADGGNNYQFFKASTQSSAINRLNMESEMRKAIERGEFVLHYQPQIN 297 Query: 287 TQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVL 346 + V G+E L+RW+HP G IPP FI+ AE MIVP+ + + R Sbjct: 298 ATSGHVVGMEALIRWQHPERGMIPPYHFISVAEETGMIVPIGEWVMYEACRQNKAWHDAG 357 Query: 347 PVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEA-TQLFAW 405 +K +N++ ++ L + + LEITE ++K+ EA L Sbjct: 358 LAELKVAVNLSARQFSDRKLLDKVRHALKQSGLNPAFLELEITESVIMKDIEATIALLEE 417 Query: 406 LHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKR 465 + S+G+ +AIDDFGTG+S+L YL+RF +D LKID+ FI+ + + +++A++ L+ Sbjct: 418 IASMGLSLAIDDFGTGYSSLNYLKRFPIDKLKIDKSFIDDVISSEDDGKIVEAIIGLSHN 477 Query: 466 LNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYT 515 L + + EGVE EQ WL ER N +QGY+ S+PLP D+F +++ Sbjct: 478 LKLNVICEGVEDAEQFAWLQERQCNEIQGYYFSKPLPADEFEAFVRSRNA 527 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 100/495 (20%), Positives = 188/495 (37%), Gaps = 62/495 (12%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ + K L YF L + +R A+ A +++ Sbjct: 427 DITERKKTEERIKNLA-YFDVLTALPNRRLFTDRLQIAIANAHRHGQQLAIMFLDL---- 481 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 ++ + +L Sbjct: 482 ----------------------------------------DLFKRINDSLGHGVGDQVLV 501 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 + + + ++ E + + ++ + R++ + + Sbjct: 502 ETAARISHCVREGDTVARLGGDEFTVLLPELDHLEDVAKLAERVIAHVKQPFLVDDNELY 561 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMS--------VRMRPGREI 268 + + +Y +D T + M +G Y L + R+ + Sbjct: 562 VTTSIGIAVYPEDGTTVEALIKNADTAMYRAKDLGRNSYQLYTAAMNARSFERLTMESSL 621 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A+ RE+F + YQ VD++ R++G+E L+RW HP G + P FI AE+ +I + Sbjct: 622 RHALTREEFRLVYQVKVDSEDGRMSGVEALVRWHHPEMGLVSPVDFIPLAEAMGVISDIG 681 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + R + V+ +N++ + + L + LE+ Sbjct: 682 EWVLRTACRQCKHWMDLGLPPVRIAVNVSAQQFVETDVPEVVARALRETGLPPQYLELEL 741 Query: 389 TERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE +++ E + L ++GV I+IDDFGTG+S+L YL+R +D LK+DR F+N I Sbjct: 742 TETVLMQRVDEVVAVLKSLRAMGVRISIDDFGTGYSSLSYLKRMPIDALKVDRSFVNDIF 801 Query: 448 TE-----TITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 + ++ ++ LA L + +AEGVETPEQA +L +G + +QGY ISRP+ Sbjct: 802 DGQSKVTEDGAEIVSTIINLAHNLKLKAIAEGVETPEQAEFLRSKGCDEVQGYLISRPVS 861 Query: 503 LDDFVRWLKKPYTPQ 517 +D + + PQ Sbjct: 862 GEDLISLFDRNLLPQ 876 >UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum sp. Group II RepID=B6AQA1_9BACT Length = 702 Score = 514 bits (1324), Expect = e-144, Method: Composition-based stats. Identities = 103/524 (19%), Positives = 199/524 (37%), Gaps = 58/524 (11%) Query: 3 IRAPNFGRKLLLTCIVAG--VMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFAD 60 ++ + + + + + I +++S + +A + + + + Sbjct: 209 LKNSSDAWLAVTIGLASFMILAIGLILSLVDSHLATRTAGLVGSLKAANEKLHYLALHDG 268 Query: 61 LKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLN 118 L +R L+ + A A + F ++V F + D S ++ + Sbjct: 269 LTRLPNRTLLEDRVDQAIRHARGVDGAFSVFFLDVDRFKPINDS--LGHSTGDKVLQQMA 326 Query: 119 ELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSR 178 + + ++ Sbjct: 327 RRLSGTVGPE------------------------------------------DTVARIGG 344 Query: 179 QEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWY 238 E + + ++ + ++ + + L+ D T Sbjct: 345 DEFVIVFPEQKDPGKVHEIARKIRDCVAENMEVDGQSLSVTTSIGISLFPHDGTTFRTLL 404 Query: 239 AFLLGGMS---GTVVGLLCYYL------MSVRMRPGREIMTAIKREQFYVAYQPVVDTQA 289 A M G + +Y ++R+ ++ I++E+F + YQP V Sbjct: 405 ASADSAMYYAKSKGSGQIQFYSGELNDSAALRIEMENDLRRGIEKEEFVLYYQPKVTLAT 464 Query: 290 LRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVG 349 V +E L+RW HP G +PP FI AE +I+PL + + + R+A ++ Sbjct: 465 GEVESVEALVRWNHPEKGILPPHYFIPRAEETGLIIPLGRWIMDRACREAVIWQQAGFSR 524 Query: 350 VKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHS 408 ++ +N++ ++ +I L S + LEITE ++++ E A + + + Sbjct: 525 LRVAVNLSALQFINQDLMKEILDALESSGLPPECLELEITESLLMEDPEGAMRTLSGIRQ 584 Query: 409 VGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNM 468 GV +AIDDFGTG+S+ YL++F LD LKIDR FI I + ++ ++TL LN+ Sbjct: 585 KGVHVAIDDFGTGYSSFSYLKKFPLDRLKIDRSFITDICDNPNDAAIVRTIITLGHNLNL 644 Query: 469 LTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 +AEGVE+ Q L + QG++ SRPLP + LK+ Sbjct: 645 KVIAEGVESQAQLEMLKAMECDAYQGFFNSRPLPPGELAERLKE 688 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 514 bits (1324), Expect = e-144, Method: Composition-based stats. Identities = 108/485 (22%), Positives = 183/485 (37%), Gaps = 58/485 (11%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDRL--QPLTLDTCQQANPELTARAAFSMNVRTF 96 +V +YL Y L +R A A +++ F Sbjct: 647 QDVTSAREAEAHIQYLAHY-DSLTGLPNRSAWMNQARSALSLAQRHQHILAVLFLDLDNF 705 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 V D + + + + Sbjct: 706 KTVNDS--LGHPVGDRLLAAVAQRL----------------------------------- 728 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 A L S E + + + + ++++ + Sbjct: 729 -------AHCLREEDSFARLGGDEFVALLPRVTRAEDAAAVARKMLDALATPVVIDDHEL 781 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSV------RMRPGRE 267 + + + L+ D T D M G +++ + R+ Sbjct: 782 APSVSIGISLFPSDGTDVDTLLKHADTAMYGAKEVGRNNFQFFVPEMNTRALERLLLENA 841 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + AI+R + + YQP V + R G E L+RW+HP G +PP FI AE +IVPL Sbjct: 842 LRRAIERNELTLHYQPQVAATSDRPNGCEALVRWQHPDFGLVPPAQFIPIAEDSGLIVPL 901 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + + R + + + G+NI+ F + ++L A+ +I LE Sbjct: 902 GEWVLREACRQQVKWARSGL-HLMVGVNISALQFRRADFVDSVVQVLAETGANPERIELE 960 Query: 388 ITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 ITE ++ +A + L ++G+ +A+DDFGTG+S+L YL+R + LKIDR F+ + Sbjct: 961 ITESALMDASDALSRRLRELANMGLSLALDDFGTGYSSLAYLKRLPIGRLKIDRSFVKDL 1020 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 + + V A L+LA+ L + VAEGVET Q +L RG + +QGY SRPL + F Sbjct: 1021 PGDPEDAAVTAATLSLARDLGLEVVAEGVETVAQRDFLVARGCHTLQGYLYSRPLDVAAF 1080 Query: 507 VRWLK 511 W++ Sbjct: 1081 EAWMQ 1085 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 513 bits (1322), Expect = e-144, Method: Composition-based stats. Identities = 95/421 (22%), Positives = 167/421 (39%), Gaps = 25/421 (5%) Query: 116 PLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT----- 170 PL L + ++ A+ + + N + L Sbjct: 642 PLTNLPNRRLVQSRLEHALERADRQGGRVAVLFVDLDRFKTVNDSLGHPSGDVLLELLAR 701 Query: 171 ---------PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMP-VRETKIAGI 220 +L E + + + + L+++ + + G Sbjct: 702 RLSERVREDDTLARLGGDEFLVLLENLQRPEDAAAVAESLLSLLQQPFHLPNGQELYVGA 761 Query: 221 PLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYL------MSVRMRPGREIMTA 271 + + LY DD M +Y R+ + A Sbjct: 762 SIGISLYPDDGHTVTDLIQHADVAMYQAKEEGRNTYRFYTPSLTQTARERLGLEARLHRA 821 Query: 272 IKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHL 331 + E+F + YQ +D + R+ G E L+RW G + PD FI AE +IVPL + + Sbjct: 822 LASEEFVLHYQAQIDMRDGRLIGCEALVRWHSATEGLVAPDRFIPLAEETGLIVPLGEWV 881 Query: 332 FELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITER 391 D + +N++ L S + ++L ++ LE+TE Sbjct: 882 LRQACADCQSWRARGLTDLTVAVNLSGRQLRSPDLVERVTRVLRETGLPAERLKLELTES 941 Query: 392 DMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTET 450 ++ ++E A + L ++GV ++IDDFGTG+S+L YL+R +D LKIDR F+ I ++ Sbjct: 942 MIMDQREQALERLRALKALGVRLSIDDFGTGYSSLAYLKRLPIDELKIDRDFVRDIPEDS 1001 Query: 451 ITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 + ++ +A+ L + +AEGVETPEQ +L +G QGY RPLP + F + + Sbjct: 1002 SDMEIAATIIAMARNLRLNVIAEGVETPEQCDFLIRQGCTAGQGYLFGRPLPAEAFAQVM 1061 Query: 511 K 511 + Sbjct: 1062 R 1062 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 513 bits (1322), Expect = e-144, Method: Composition-based stats. Identities = 99/497 (19%), Positives = 181/497 (36%), Gaps = 61/497 (12%) Query: 27 VSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQP--LTLDTCQQANPELT 84 V + A + + ++ L +R L + A E Sbjct: 529 VINYVGVFADISEIKHSQSRLNELVNR-----DPLTGLPNRRLMHELLDHAIKYAEREQN 583 Query: 85 ARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNK 144 A +++ F + D T ++ +++ I A + Sbjct: 584 EIALLFVDLDRFKAIND--TLGHQMGDKLLFEVSQRIRAAVRDS---------------- 625 Query: 145 PAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNV 204 ++ E + ++ + + ++++ Sbjct: 626 --------------------------DAVARLGGDEFIVMMDVLREREDAAKVAKKIISS 659 Query: 205 NELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSG---TVVGLLCYYLMS-- 259 + + + + +Y DD D M C+Y Sbjct: 660 LQNEFLIDGRELFISASVGISVYPDDSLDVDGLIKAADIAMYQVKNKGKNNHCFYSADLS 719 Query: 260 ----VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFI 315 R ++ A+ R+QF V YQ V + R+ G E L+RW HP G + P FI Sbjct: 720 QNAVERFTLENQLRRALARDQFEVYYQAQVSLETGRIIGAESLIRWIHPELGVVSPAKFI 779 Query: 316 NFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLT 375 AE +I+P+ + + A E +N++ + +F + +L Sbjct: 780 PLAEETGLIIPIGEWVLRQSAMQVKEWHDQGFDIDWVSVNVSGVQIQRSNFADTVYGILV 839 Query: 376 SLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLD 434 + LEITE ++ E +F + +GV +AIDDFGTG+S+L +L+R LD Sbjct: 840 ETDCESHLLELEITESTVMHNTEYVIDVFDRIKHLGVRLAIDDFGTGYSSLSHLKRLPLD 899 Query: 435 YLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQG 494 +KID+ F+ + + + + A+ +A+ L +AEGVET +QA +L + G QG Sbjct: 900 KIKIDQSFVRDLPNNSDDAAIATAINAMAQSLGFTVIAEGVETRQQASFLKKIGCQQGQG 959 Query: 495 YWISRPLPLDDFVRWLK 511 Y SRP+ +F L+ Sbjct: 960 YLYSRPVTASEFTALLR 976 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 512 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 115/491 (23%), Positives = 193/491 (39%), Gaps = 58/491 (11%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTF 96 ++ + ++L L +R L D QQ A +++ F Sbjct: 631 ADITVRKQAEERLQFLAN-HDPLTRLPNRSWLIACLEDRIQQIASSGQQVAVMFLDLDRF 689 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 L+ D F E+ + + + Sbjct: 690 KLINDS--FGHQTGDELLRETASRLEQVVGGRGQ-------------------------- 721 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 + E V+ LST + ++ V + Sbjct: 722 ----------------IARLGGDEFTLLVSHFASQATLSTLAEDILAVLAQPLWLEGQEL 765 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSV------RMRPGRE 267 I L + +Y D + M ++ + R++ R Sbjct: 766 IVTGSLGISVYPHDGSDARTLLKNADVAMYRAKEAGKNTYQFFAAEMNAQAIERLQLERG 825 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A++R +F + +QP+V R+ LEVLLRWRHP G + P FI AE +I P+ Sbjct: 826 LRQALERGEFELHFQPIVAAATYRLEALEVLLRWRHPELGLVSPVRFIPLAEETGLIRPI 885 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + R AE + + + IN++ + + L ++ LE Sbjct: 886 GDWVIRQACRQLAEWDCLGLHVPRLAINLSARQFEQQGLIMQVAGALAEAGIAAGRLELE 945 Query: 388 ITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE +++ EA L L ++GV ++IDDFGTG+S+L YL+RF LD LKIDR FI + Sbjct: 946 MTESMVMQNPSEAVSLLGELKALGVRLSIDDFGTGYSSLSYLKRFPLDTLKIDRSFIEGL 1005 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 + + + +A+L +A++L+ VAEGVET QA +L +G +QGY SRPLP + Sbjct: 1006 PGDGDNAAIAEAILAMARKLSFSVVAEGVETEAQAAFLCAKGCQLLQGYLFSRPLPAAEL 1065 Query: 507 VRWLKKPYTPQ 517 +L++ +PQ Sbjct: 1066 PAFLQQ-RSPQ 1075 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 511 bits (1317), Expect = e-143, Method: Composition-based stats. Identities = 97/391 (24%), Positives = 173/391 (44%), Gaps = 10/391 (2%) Query: 132 MAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGN 191 +A L ++ + LLK + L + ++ E + Sbjct: 309 IAFLDLDQFKFINDSLGHQVGDELLKITAQRLTSCLRESDTVARQGGDEFVLLLTDQPNE 368 Query: 192 TALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV-- 249 A++ R+++ + + L DD + M Sbjct: 369 EAITHTMQRVLHEVSQPWKANDLEFQITCSIGLTLCPDDGRDAETLLKNADSAMYKAKEL 428 Query: 250 -VGLLCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWR 302 Y+ + R+ + AI E F + YQP V + ++ G E L+RW Sbjct: 429 GRNNFQYFSAEMNSSVTDRLELLNRLRQAITNEDFVLHYQPKVSLASHQIIGAEALVRWN 488 Query: 303 HPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLH 362 +G + P +FI AE +I+PL + + R + + +N++P L Sbjct: 489 SAHSGMVSPASFIPLAEETGLIIPLGEWVLRTACRQNRAWQDAGYPPIPISVNLSPRQLA 548 Query: 363 SESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTG 421 ++++LT + LEITE M + E + L L S+GV+I++DDFGTG Sbjct: 549 RGDIVEVVERILTETGLEAQHLELEITESVMTTDVEKSFALLTQLRSLGVKISLDDFGTG 608 Query: 422 HSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQA 481 +S+L YL+RF +D LKID+ F+ I T+ ++ ++ A+++L + LN+ +AEG+ET +Q Sbjct: 609 YSSLSYLKRFPVDTLKIDQSFVRDIATDQDSAAIVKAIISLGRNLNLTVLAEGIETEDQF 668 Query: 482 RWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 ++L G + QGY +S+P+P +FV L + Sbjct: 669 QFLLANGCDEGQGYLMSKPVPNKNFVDLLTQ 699 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 511 bits (1316), Expect = e-143, Method: Composition-based stats. Identities = 97/423 (22%), Positives = 172/423 (40%), Gaps = 26/423 (6%) Query: 114 DIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK-NSGVFAALNLNLT-- 170 D + +P + + +L ++ A++ + + N + ++ L Sbjct: 157 DYDVLTGLPNRRLLRERFEQLLAAAEREKSEIAVIFLDLDHFKRVNDSLGHSVGDELLCE 216 Query: 171 ------------PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIA 218 +L E + A + RL+ V Sbjct: 217 VARRLDSVVRRIDTLARLGGDEFIFAMPG-FHTAAAVEVARRLVEVFSRPFEVAGHELTV 275 Query: 219 GIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSV------RMRPGREIM 269 L + +Y D + M +Y + R+ + Sbjct: 276 TPSLGISIYPHDGRDLETLLRNADTAMYRAKEMGRNAFQFYSSEMNTTTLDRLLMESNLR 335 Query: 270 TAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQ 329 A+ + +F + YQP+V+ + + G+E L+RW HP G I PD FI+ AE +I P+ Sbjct: 336 RALVQNEFILHYQPLVNLETGLIIGVEALIRWLHPELGLIMPDRFIHVAEETGLINPIGD 395 Query: 330 HLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEIT 389 + R A + +N+AP F + L + ++ LE+T Sbjct: 396 WVLCEACRQAKAWCDAGLPPICMAVNVAPVQFRQAGFVEMVAGALATSGLDASRLELELT 455 Query: 390 ERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGT 448 ER ++ + + + LH +GVE+++DDFGTG+S+L YL+RF + LKIDR F+N + T Sbjct: 456 ERTVMHDADINMGTLSALHRMGVELSLDDFGTGYSSLAYLKRFPVGKLKIDRSFVNDLET 515 Query: 449 ETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVR 508 + + ++++ + L M +AEGVE EQ L + G + QGY+ SRP+ D Sbjct: 516 DPDDWAIASTIVSMGRSLRMTVLAEGVEKVEQLALLRKMGCDMAQGYYFSRPMSADGMAD 575 Query: 509 WLK 511 L+ Sbjct: 576 MLR 578 >UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Comamonadaceae RepID=A1W8G6_ACISJ Length = 756 Score = 511 bits (1316), Expect = e-143, Method: Composition-based stats. Identities = 97/498 (19%), Positives = 181/498 (36%), Gaps = 58/498 (11%) Query: 30 LQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARA 87 LQ V E++ + ++ Y L +R L D +QA A Sbjct: 305 LQETVGNLHREIQDRQRDQERIYWMAHY-DALTELPNRVLLAERGQDAIRQAQESGAPLA 363 Query: 88 AFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAI 147 +++ F V D + + + + + + + +A L G V P Sbjct: 364 VMFLDLDNFKHVNDS--LGHRIGDALLVEIAQRL-RTTVRQRDTVARLGGDEFVLLLPG- 419 Query: 148 VIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNEL 207 + ++++ Sbjct: 420 -----------------------------------------ANAQGAARVAAKMQEAALQ 438 Query: 208 TDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSVR--- 261 + + + L+ + + + M ++ +++ Sbjct: 439 PVHIQHHELSLALSMGIALFPEHGSDFETLIQSADTAMYRAKADGRNSFRFFTPTMQAQS 498 Query: 262 ---MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFA 318 ++ + A++R Q + YQP V RV G+E LLRW HP G + P FI A Sbjct: 499 ARALQLTNALRRALERNQLSLHYQPQVSIATGRVCGVEALLRWHHPELGAVSPAEFIPVA 558 Query: 319 ESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLP 378 E I+P+ + + + +N++ + +LL Sbjct: 559 EDTGQILPIGEWVLRTALAQLRTWHSQGLPALTMAVNLSAVQFRQPQLLELVDRLLAEYG 618 Query: 379 AHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLK 437 + LE+TE + + A LH+ GV +++DDFGTG+S+L +L+RF + LK Sbjct: 619 VQPHLLELELTENVAVADPHAAIATMDQLHAKGVRLSMDDFGTGYSSLSHLKRFQIYRLK 678 Query: 438 IDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWI 497 ID+ F+ + + ++ A++ +A+ L M T AEGVET Q +L E+G + QG++ Sbjct: 679 IDQSFVRDLDHDGNDRAIVSAIIRMAQALGMRTTAEGVETAHQLTFLREQGCDEAQGFYF 738 Query: 498 SRPLPLDDFVRWLKKPYT 515 SRPL ++L + Sbjct: 739 SRPLGAPHLQQYLLQRPA 756 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 510 bits (1315), Expect = e-143, Method: Composition-based stats. Identities = 106/519 (20%), Positives = 191/519 (36%), Gaps = 59/519 (11%) Query: 6 PNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTT 65 N+ + L + ++ L + L Sbjct: 427 RNYRKNGSLFWNDLYIAPVKDDEGKTTHFVAAMSDITPMKQYETTLHRLAS-HDVLTGLP 485 Query: 66 DR--LQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPA 123 +R LQ + + A +++ F V D T A + +++ + A Sbjct: 486 NRALLQDRLENAIAYSARNGHAVWVVLVDLDRFKFVND--TMGHQAGDVLLKIISDRLQA 543 Query: 124 LDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYD 183 ++ + ++ E Sbjct: 544 ------------------------------------------SVRESDTVARLGGDEFVL 561 Query: 184 GV-ALIIGNTALST-FSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFL 241 + G + S+ R+M + + +Y +D A Sbjct: 562 VLPECGDGPSGYSSDVIQRIMEAVVKPLTIQGSEFFLSCSMGIAVYPNDGADPTTLLAHA 621 Query: 242 LGGMSG---TVVGLLCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQALRV 292 M +Y ++ R+R E+ AI+ + + YQP VD + Sbjct: 622 DVAMYRSKELGRNNFQFYTPAMNDQALERLRIEGELRHAIELNELVLHYQPQVDLHTGAI 681 Query: 293 TGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKF 352 GLE L+RW HP+ G + P +FI+ AE +I+P+ + + R A + + ++ Sbjct: 682 VGLEALVRWNHPILGMVQPGSFISLAEETGLIIPIGAWVLQTACRQAKAWQDMGFTQLRI 741 Query: 353 GINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGV 411 +N++ S I+ L + +E+TE ++ + E L S+GV Sbjct: 742 AVNLSARQFTQASLLESIKDTLQETGLEARFLEIELTESSVMADIERNILTLRDLKSLGV 801 Query: 412 EIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTV 471 ++++DDFGTGHS+L YL+RF +D LKIDR F+ I + ++ ++++LA L + + Sbjct: 802 QLSVDDFGTGHSSLAYLKRFPIDTLKIDRSFVRDIAINQDDASIVSSIISLAHNLKLNVI 861 Query: 472 AEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 AEGVET Q L +G N +QGY+ +PLP D L Sbjct: 862 AEGVETASQMDILRAQGCNEIQGYYFCKPLPSDQIETLL 900 >UniRef50_A8ZUW0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUW0_DESOH Length = 764 Score = 510 bits (1315), Expect = e-143, Method: Composition-based stats. Identities = 105/491 (21%), Positives = 192/491 (39%), Gaps = 47/491 (9%) Query: 38 KHEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRT 95 ++ L + +YL T +L +R + + A A +++ Sbjct: 306 SRDITERRLAEEKIRYLAT-HDNLTELPNRTLFGQMLGRAIKFAQRYQRQFAVLFIDLDR 364 Query: 96 FVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPL 155 F ++ D T A ++ + + V+ N Sbjct: 365 FKIIND--TMGHDAGDQLLKEIASRFR------------------QSLRAVDVVGRLNEK 404 Query: 156 LKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRET 215 G E + + + ++T + +++N + + E Sbjct: 405 DSVVG--------------RLGGDEFVVLIEEVTNLSQVATVAQKILNTAIKPMVLLGEE 450 Query: 216 KIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMS------VRMRPGR 266 + + +Y DD M +Y + R Sbjct: 451 CRVTASIGISVYPDDGEDERTLMKKADMAMYFAKEEGKNNFQFYSQNTHSPAFERFFVEA 510 Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 E+ A++R + Y+ YQ +D + +TG E LLRWR+P G + P F+ AE +IVP Sbjct: 511 ELRHALERNELYLDYQAKLDFKTGAITGSEALLRWRNPGLGLVAPTQFLPVAEETGLIVP 570 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 + + + + ++ V +N++ L + DI+ L + + L Sbjct: 571 IGRWVMKTACAQNVAWQRQGLPPVTVAVNLSLRQLMDDKLIEDIRTALEASGMAPNLLEL 630 Query: 387 EITERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 EITE ++ +L A + S+GV IA+DDFGTG+S+L ++ +D LK+DR FI Sbjct: 631 EITESIVMHKPAPLIELLARIKSLGVRIALDDFGTGYSSLAQIKHLPVDTLKVDRSFIRN 690 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 + +++AV+ + + L++ +AEGVET Q +L E + MQG++ S+P+ D Sbjct: 691 LQQNPDDREIIEAVIAMGRALSLNVIAEGVETLAQDTYLREHICDEMQGFYFSKPVAPDQ 750 Query: 506 FVRWLKKPYTP 516 F L K TP Sbjct: 751 FADLLSKHTTP 761 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 510 bits (1314), Expect = e-143, Method: Composition-based stats. Identities = 86/426 (20%), Positives = 169/426 (39%), Gaps = 24/426 (5%) Query: 112 EMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTP 171 L L +K + +AI + I N + L Sbjct: 154 ATHDSLTALPNRFMFSKLLAVAIESARRHQRQLAVLFIDLDRFKNINDTLGHDAGDQLLI 213 Query: 172 SLF--------------YSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 ++ E + + + + + ++++ + Sbjct: 214 TMANRFRTCLRTSDIVGRLGGDEFVILLPELESHDQAARVAQKILSAAIQPLDVHGQECR 273 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMS------VRMRPGREI 268 + + LY +D M +Y R+ + Sbjct: 274 VTASIGICLYPEDAEDEQALMKNADIAMYRAKEEGKNNYQFYSPDLKVRSLERLMLENNL 333 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A++R +F++ YQ + + ++ G+E L+RW+HP G I P FI AE +IV L Sbjct: 334 RKALERHEFFLHYQAKRNLKTGKIAGVEALVRWQHPELGTISPAHFIPLAEETGLIVHLG 393 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + ++ + +N++ ++ DI L + +EI Sbjct: 394 RWVLRAACTQGVIWQQQGLPPICIAVNLSARQFFDDNLINDIANALRESGLAPELLEMEI 453 Query: 389 TERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE ++++ E A ++ + ++GV +AIDDFG G+S+L +++RF +D LK+D FI I Sbjct: 454 TEGMIMQDAERAIRILTGIKALGVRLAIDDFGVGYSSLAHIKRFPIDTLKVDSSFIRDIP 513 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + +A++ + K L++ +AEGVET EQ +L + + QGY+ S+P+ ++F Sbjct: 514 ANREDRAITEAIIAMGKTLSLTVIAEGVETQEQENFLRDSACDQTQGYYFSKPVSPEEFT 573 Query: 508 RWLKKP 513 R++ Sbjct: 574 RFMLAH 579 >UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3JAR2_NITOC Length = 944 Score = 510 bits (1314), Expect = e-143, Method: Composition-based stats. Identities = 102/485 (21%), Positives = 186/485 (38%), Gaps = 57/485 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ YL L +R A A +++ F Sbjct: 499 DITLRKQTEQRLYYLAH-HDALTGLPNRSLFLDRLEHAIHHAQRHHHRIAVLFIDLDRFK 557 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 + D T + + E + Sbjct: 558 FIND--TLGHPIGDILLKQVAERMR----------------------------------- 580 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 LN+ ++ E + +A+S + ++++ E Sbjct: 581 -------LNIRAEDTIARLGGDEFTVIIENFTDTSAISLITQKIISACEKPFNIKGNELF 633 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMS--------VRMRPGREI 268 + V LY +D + M G C + ++ + Sbjct: 634 VSASIGVSLYPEDGHEASMLLQRADAAMYQAKKRGKSCCQFFTTEINTAATEQLALKNLL 693 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A+ R++F + YQP+++ ++ + +E L+RW P G I P+ FI AE +I+PL Sbjct: 694 RRALARKEFQLYYQPIINMESGAIVSVEALIRWVDPELGLISPNTFIPLAEENGLILPLG 753 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + + A + P V+ IN++ L F + ++L P + LE+ Sbjct: 754 EWVLQTACTQAKIWNQSNPYPVRIAINLSARQLEQTDFSERVSEILKKTPFPTDHLELEL 813 Query: 389 TERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE ++ E + + L +G +++DDFGTG+S L YL+RF +D +KIDR F+ I Sbjct: 814 TESMLINRMESSLKTLNTLKKMGCRLSLDDFGTGYSPLAYLKRFPIDTVKIDRSFVQGIS 873 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + + + AV T+A L +A+GVET EQ +L+E V+ QGY+IS P+P ++ Sbjct: 874 IDPDDAAITTAVTTMAHSLKRAVIAKGVETREQLNFLNEIKVDEAQGYFISYPVPAEELT 933 Query: 508 RWLKK 512 + L++ Sbjct: 934 QKLRE 938 >UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YAT8_NITMU Length = 705 Score = 510 bits (1314), Expect = e-143, Method: Composition-based stats. Identities = 97/485 (20%), Positives = 183/485 (37%), Gaps = 57/485 (11%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTF 96 ++ + +YL Y L +R + A A +++ F Sbjct: 263 RDITQRKESQERIEYLAHY-DSLTGLPNRTLLSDRLRIAIENARRYSIRLALLFVDIDRF 321 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 LV D ++ + + + + Sbjct: 322 KLVNDS--LGHEIGDKLLKAVAQRMQST-------------------------------- 347 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 + ++ E ++ I T + + +L+ Sbjct: 348 ----------VRQADTVSRVGGDEFVVLLSRIETATDAARSAEKLITSISQPYQIEEHEL 397 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMS---GTVVGLLCYYL------MSVRMRPGRE 267 + + + +Y D+ M G +Y + R+R + Sbjct: 398 LLTASIGISIYPDNGKDASSLTRNADAAMYSAKGQGRNRYQFYSEDLTYAAAERLRLEHD 457 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A+ R++ + YQP ++ RV G+E L+RW G I P +FI AE +I+ L Sbjct: 458 LRGALSRDEIFPLYQPQIELATGRVIGVEALMRWNRAGQGLISPASFIPVAEDSGLILAL 517 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 +++ A + + +N++ F + ++L+ + LE Sbjct: 518 GEYILRKACLQARQWHEHQGFQGTIAVNVSAVQFRQNDFTDVVLRVLSETGFPPECLELE 577 Query: 388 ITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE +++ E Q L S G+++AIDDFGTG+S+L YL +F +D LKID+ F+ + Sbjct: 578 VTESVVMQGLESVVQKMGILESHGIKLAIDDFGTGYSSLSYLRQFAIDRLKIDQSFVRDL 637 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 + ++ A++ + + L + +AEGVET QAR+L + QGY +RP+ +DF Sbjct: 638 PGDADAQAIIRAIVAMGRSLGLRVMAEGVETEAQARFLQDIECTESQGYLYARPMKSNDF 697 Query: 507 VRWLK 511 WLK Sbjct: 698 EAWLK 702 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 510 bits (1314), Expect = e-143, Method: Composition-based stats. Identities = 108/487 (22%), Positives = 184/487 (37%), Gaps = 58/487 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ + + L Y L +R ++A A +++ F Sbjct: 440 DISQLKDSQEQLERLAHY-DPLTGLPNRHLALARLEHALERARRHAFPLAVMFIDLDRFK 498 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 + D A E+ + + + + Sbjct: 499 TINDS--LGHQAGDELLVAIAQRLHQR--------------------------------- 523 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 L +L E + S + L V++ Sbjct: 524 ---------LRQEDTLARLGGDEFLVVIEEAPVQQVASIAHALLKVVDQPFGFSGGGEAY 574 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMS---GTVVGLLCYYL------MSVRMRPGREI 268 G + + LY D M +Y + R+ + Sbjct: 575 VGASIGISLYPGDGRSASELIRNADAAMYLAKAQGSNAYRFYTESLTRAANERLSMETSL 634 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A++ E+F + YQP+V+ + RV G EVL+RW+ P +PP FI AE +IVPL Sbjct: 635 RRALRCEEFVLHYQPLVELASGRVLGAEVLVRWQPPGEALVPPSRFIPLAEETGLIVPLG 694 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + R + +N++P ++K L Q+ LE+ Sbjct: 695 DWVLHEACRQGKAWLDAGLPLL-LAVNLSPRQFLRHDLVGQVRKALQGSGLPPAQLELEL 753 Query: 389 TERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE ++++ E A + L +GV +AIDDFGTG+S+L YL+RF LD LKIDR F+ + Sbjct: 754 TEGALMEQAEQAVKTLHALKRLGVSLAIDDFGTGYSSLAYLKRFPLDKLKIDRSFVRDLP 813 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 ++ + ++ ++ + + L + +AEGVETP+Q +L + G + QGY S PLP + F Sbjct: 814 RDSSDAEIVTTIIAMVRNLKLEALAEGVETPQQLAFLRQLGCDSGQGYLFSPPLPAEAFE 873 Query: 508 RWLKKPY 514 RWL+ Sbjct: 874 RWLRDGR 880 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 510 bits (1313), Expect = e-143, Method: Composition-based stats. Identities = 97/465 (20%), Positives = 171/465 (36%), Gaps = 56/465 (12%) Query: 58 FADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDI 115 L +R L A + A +++ F + D + Sbjct: 336 HDFLTDLPNRRVLDDRLRQAISLARRQGKQLAVLFVDIDRFKHINDS--LGHGMGDKALQ 393 Query: 116 PLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFY 175 + E + ++ Sbjct: 394 SMAERLTTCVRAS------------------------------------------DTVAR 411 Query: 176 SSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWND 235 E +A + + + ++++ L R + + +D + Sbjct: 412 QGGDEFVILLAEVTTADDAAIVAKKILSAVALPHRIGRHELQISASIGISTCPNDADDAE 471 Query: 236 VWYAFLLGGMSG---TVVGLLCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVD 286 M ++ + R + A++R++F + YQP ++ Sbjct: 472 TLIKHADIAMYQAKEKGRNNYQFFRADMNERVLQRQSLESSLRLALERQEFLLHYQPKMN 531 Query: 287 TQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVL 346 + +TG+E L+RWRHP G +PP +FI AE ++ P+ + + + R E Sbjct: 532 LETGHITGMEALIRWRHPELGLVPPASFIGVAEDCGLMQPIGRWVLQEACRQVKEWMVAG 591 Query: 347 PVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAW 405 V +N++ + F + L + LE+TE ++KE E + Sbjct: 592 LNPVPVAVNVSAVEFRRKHFFDGVISTLRETDLDPRYLELELTETVLMKEAEPTIAVLHA 651 Query: 406 LHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKR 465 L S GV++AIDDFGTG+S+L YL R +D LKIDR F+ + T T + ++ A++ + K Sbjct: 652 LKSAGVKLAIDDFGTGYSSLSYLTRLPVDTLKIDRSFVTDVTTRTDNAAIVSAIIGMGKS 711 Query: 466 LNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 LN+ +AEGVET EQ L QGY+ SRP+ + L Sbjct: 712 LNLNVIAEGVETQEQLALLRSHCCAEGQGYYFSRPVSVPAVAELL 756 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 510 bits (1313), Expect = e-143, Method: Composition-based stats. Identities = 98/490 (20%), Positives = 184/490 (37%), Gaps = 59/490 (12%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTF 96 ++ + + L F L + L A + + +++ F Sbjct: 595 RDLSRRDEAQEHIRRLSH-FDTLTGLPNSSLFADLLRQAIGNAQRSGESLSVMYIDIDHF 653 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 + D T + + + +N Sbjct: 654 QHIND--TLGHRIGDRLLVEIAGRFRNALCAEN--------------------------- 684 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 +L E + + + +L+ + Sbjct: 685 ---------------TLARLGGDEFLILLPHAQ-VECAAHVAEKLIVAAADPMLIEDHEM 728 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSVRMR------PGRE 267 + + + +Y D + + ++ +++R Sbjct: 729 LVTPSIGIAMYPADGEDFETLLQRADTATNRAKSDGRNTYRFFAPEMQLRSAHTLRLETA 788 Query: 268 IMTAIKREQFYVAYQPVVDTQA-LRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 + A++R + + YQP +D RV G+E L+RW+HP G + P FI AES +I+P Sbjct: 789 LRRALERNELVLHYQPQIDLVDFGRVAGVEALIRWQHPEFGLVSPAEFIPIAESTGLILP 848 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 + + + + + + G+N++ ++ A + ++L + L Sbjct: 849 IGEWVMQTALLQLKAWQLAGLQLGQVGVNLSAHQFRQQNLPATVARILAEAGLPASCLEL 908 Query: 387 EITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 E+TE M+ + A + LH GV ++IDDFGTG+S+L YL+RF +D LKID+ F+ Sbjct: 909 ELTESAMMDDPVAAVAMMDALHRDGVRMSIDDFGTGYSSLNYLKRFRIDKLKIDQSFVRD 968 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 + + +++A+++LA+ L T+AEGVE PEQ +L G +QGY SRPLP D+ Sbjct: 969 LTQDPEGEAIVEAIVSLARTLRFRTIAEGVEKPEQLAFLRASGCQEVQGYLFSRPLPPDE 1028 Query: 506 FVRWLKKPYT 515 WL+ Sbjct: 1029 LAVWLRAWRP 1038 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 98/423 (23%), Positives = 170/423 (40%), Gaps = 24/423 (5%) Query: 117 LNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT------ 170 L L + + A++ + I N + ++ L Sbjct: 609 LTRLPNRNLLRDRLQHALIVAQRHHKGVAVVFIDLDGFKNVNDSLGHSVGDRLLSVVADR 668 Query: 171 --------PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPL 222 ++ E + + +L + R+ G + Sbjct: 669 LARCARASDTVARHGGDEFVIVMTDTVDEQSLIAWMERVRASISEPVWLDGTELYVGCSM 728 Query: 223 TVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSVRMR------PGREIMTAIK 273 L+ D + M +Y + + R + A++ Sbjct: 729 GASLFPQDGDDAETLMKKADLAMYRAKDMGRNTFQFYQPEMNVSAGARLNLERRLRRALR 788 Query: 274 REQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFE 333 +F + YQP VD + +V G+E L+RW P G IPP FI AE +I PL++ + Sbjct: 789 DNEFLLHYQPQVDIETGQVVGMEALVRWHDPEVGLIPPSQFIPVAEESGLIGPLSEWVLR 848 Query: 334 LIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDM 393 R + + +N++ + ++L + LE+TE + Sbjct: 849 EACRQNKAWQDEGLPPARVSVNLSARQFQQRDIAKLVMQVLEETGLDPQYLELELTESTI 908 Query: 394 LKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETIT 452 ++ +EA + LH++G+ +AIDDFGTG+S+L YL+RF +D LKIDR F++ IG + Sbjct: 909 MRNAEEAVSMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGESSDD 968 Query: 453 SPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 + A++ LA LN+ +AEGVET Q +L ER + MQGY+ ++PLP L++ Sbjct: 969 ETITSAIIALAHSLNLQVIAEGVETSTQLDFLKERACDEMQGYFFAKPLPHHAIPGMLQR 1028 Query: 513 PYT 515 Sbjct: 1029 GSQ 1031 >UniRef50_Q0BFB8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=5 Tax=Burkholderia RepID=Q0BFB8_BURCM Length = 860 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 94/489 (19%), Positives = 179/489 (36%), Gaps = 57/489 (11%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTF 96 ++ + +YL L +R L QA A +++ F Sbjct: 250 QDITERKMQQGRIEYLAN-HDALTGLPNRNLLSDRMEQAMSQARRTGQLVAVMVLDLDRF 308 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 + D F S + + + Sbjct: 309 KHINDS--FGHSVGDGLLRVVAARLKR--------------------------------- 333 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 ++ ++ E + + + ++++ Sbjct: 334 ---------SVRDGDTVARLGGDEFVVMLVNLATQADADVIARKILDTFIEPFTLDEHDL 384 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV-VGLLCYYLMSVRM--------RPGRE 267 + V L D T + + G CY + + Sbjct: 385 HVTTSVGVSLCPTDGTNAETLLKTADAALYAAKEHGRNCYRFYTRELGARVEEQTILENA 444 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A+ + + YQP VD + +++G+E L+RWR P G IPPD FI AE +I+P+ Sbjct: 445 LHQAVANHELELYYQPKVDLKTGQISGVEALIRWRRPGIGVIPPDRFIPIAEDCGLILPI 504 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + + A + ++ +N++ + A ++ L + LE Sbjct: 505 GEWVLRTACMQAVAWRREGHPPIRIAVNLSARQFRQQDVAAMVRTTLEETGLAPDSLELE 564 Query: 388 ITERDMLKEQEATQ-LFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE ++++ A L ++GV +++DDFGTG+S+L YL+ +D +KIDR F++ + Sbjct: 565 LTESVLMQDCNAIAHTLRELKALGVVLSLDDFGTGYSSLSYLKDLPIDVVKIDRSFLDDV 624 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 T + + +++ +A+ L+M TVAEGVET Q +L+ + MQGY+ S P+ D+ Sbjct: 625 TTSAEGASLTRSIIAMAESLHMETVAEGVETEAQLSFLNRHRCHAMQGYYFSHPVTGDEI 684 Query: 507 VRWLKKPYT 515 L Sbjct: 685 ADMLSAGSQ 693 >UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Bacteria RepID=B7KEB0_CYAP7 Length = 684 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 96/487 (19%), Positives = 180/487 (36%), Gaps = 57/487 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPEL--TARAAFSMNVRTFV 97 ++ + + Y Y+ L +R + A L T A +++ F Sbjct: 241 DITDRKMAENSLHY-QAYYDTLTDLPNRSLFYEKLSTALAKAYLEETLIAVMFIDLDGFK 299 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 + D + + LL Sbjct: 300 NIND--------------------------------------------TLGHTLGDELLG 315 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 + NL + L E + I + + R+ ++ + Sbjct: 316 SFAQRLRHNLRSSDILARWGGDEFTILIPQIKNEEEIEICAKRVFSILQQPFQVGNHLLY 375 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSG-TVVGLLCYYLMS--------VRMRPGREI 268 + V +Y D + + +G Y + R+ + Sbjct: 376 LKASIGVAIYPRDGQDAETIIKNADAALYRTKEMGRNHYQIYHPLITSKTSERLEMENLL 435 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A++++QF + YQP ++ + + G+E L+RW HP G + P FI AE +I+ + Sbjct: 436 HQALEKDQFLLHYQPQINIKNQAICGMEALIRWEHPTLGLVSPAKFIPIAEESGLIISIG 495 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + +K V+ +N++ +F + K+L + LEI Sbjct: 496 EWVLRQACEQNRLWQKKGLPPVRVAVNLSAQQFQQPNFVNIVTKILAETNLEPQFLELEI 555 Query: 389 TERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE ++K E + Q+ L +GV I++DDFGTG+S+L YL++ + +KID+ FI + Sbjct: 556 TETTIMKNLEFSCQIVHDLKHMGVHISMDDFGTGYSSLGYLKQIPFNTIKIDQSFIKDLQ 615 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + ++ AVL + + N+ +AEGVET Q L + MQG+ S+PL + Sbjct: 616 DKPQDLAIISAVLAIGRGFNVRVIAEGVETQHQVELLRKLECEEMQGFKFSKPLKPEAAA 675 Query: 508 RWLKKPY 514 +L + Sbjct: 676 NFLSNHF 682 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 102/494 (20%), Positives = 172/494 (34%), Gaps = 53/494 (10%) Query: 28 SCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARA 87 S L W ++ D +++ L +RL L A Sbjct: 371 SGLPAHYVWILADITERKQAEDRMRHIAQ-HDALTGLPNRLALLM------------RLA 417 Query: 88 AFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAI 147 R V + + + Sbjct: 418 QLLPEARR------------------------------HGWTVAVMFIDLDRFKIINDTL 447 Query: 148 VIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNEL 207 + +L+ + L T + E + I + S ++++ Sbjct: 448 GHQVGDEMLREVACRLSNLLRETDFVARLGGDEFVIILPSISSPADAAIVSGKIISALST 507 Query: 208 TDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS---GTVVGLLCYYLMSV---- 260 + + ++ DD D+ M ++ + Sbjct: 508 AIEAEGHELHTSPSIGISIFPDDGPDGDIVLKNADTAMYHAKAAGRNNYQFFAADMNRTA 567 Query: 261 --RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFA 318 R+ R++ AI R + + +QP + TG+E LLRW HP G I P FI A Sbjct: 568 AERLNIERKLRHAIARNELSLVFQPQFRAEDTTPTGVEALLRWHHPTDGMISPARFIPVA 627 Query: 319 ESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLP 378 E MIV + + + A ++ +N++ L F + LT+ Sbjct: 628 EETGMIVEIGDWVLATACHEMARWINAGLKPLRIAVNVSARQLRRRDFCETVANALTTSG 687 Query: 379 AHHFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLK 437 + LEITE +++ EA + L +GV +AIDDFGTG+S+L YL+ F +D+LK Sbjct: 688 LPAELLELEITESSVMENPQEAIHILERLGRMGVTLAIDDFGTGYSSLAYLKLFPIDHLK 747 Query: 438 IDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWI 497 IDR F+ I + + + LA L + +AEGVET +Q L G + +QG+ Sbjct: 748 IDRSFVADIEHDLNDRAIAFGTIALAHSLGLNVIAEGVETEDQHELLRANGCDEVQGFLF 807 Query: 498 SRPLPLDDFVRWLK 511 S+PL +L Sbjct: 808 SKPLTGAAAFAFLH 821 >UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA and GAF sensor n=2 Tax=Cyanothece sp. PCC 7425 RepID=B8HWB1_CYAP4 Length = 884 Score = 508 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 95/503 (18%), Positives = 184/503 (36%), Gaps = 65/503 (12%) Query: 21 VMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQ 78 ++A++ + + E + L +R Sbjct: 422 AVLAMMAVSISGAIQRQHKEQVIRYQA---------FHDLLTDLPNRALFIDRLNLALSN 472 Query: 79 ANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGT 138 A+ + +++ F + D T S ++ + + + + +A G Sbjct: 473 AHRSGEKLSVLFLDLDRFKTIND--TLGHSVGDQLLKAVAHRLTHC-LREGDTIARWGGD 529 Query: 139 PMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFS 198 P I + ++ + Sbjct: 530 EFTILLPQI--------------------HQVND---------------------VAKTA 548 Query: 199 SRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVV-GLLCYYL 257 R+++ E + + +Y D + + G Y Sbjct: 549 QRMLSALEQPFHLENHELYITPSIGIAIYDLDGHDGETLIKHADMALYQAKQLGRNTYQF 608 Query: 258 M--------SVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEI 309 R+ + + A++R++F + YQP V+ + ++TG+E LLRW+HP G + Sbjct: 609 FCSGLSNGAPERLNLEKSLRHALERQEFLLYYQPQVNIKTGKITGMEALLRWKHPEMGLV 668 Query: 310 PPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKAD 369 P F++ AE +IV + + + + + +N++ Sbjct: 669 IPQLFMSVAEESGLIVAIGEWVLRTACAQNKTWQDQGLPPICIAVNLSARQFRQPDLTGM 728 Query: 370 IQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYL 428 I ++L + LEITE +++ E ++ L +G++I++DDFGTG+S+L +L Sbjct: 729 IARILDETGLPPQYLDLEITETTAIQDIEFTKRVLQELQDMGIQISMDDFGTGYSSLAHL 788 Query: 429 ERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERG 488 ++F L+ LKIDR F+ + + + ++ AV+ LA+ LN+ VAEGVE EQ L Sbjct: 789 QQFPLNTLKIDRSFVRDVAANSRDAQIVTAVIGLARGLNLNVVAEGVENDEQLNCLESLH 848 Query: 489 VNFMQGYWISRPLPLDDFVRWLK 511 QGY +RPL D L+ Sbjct: 849 CEEAQGYIFNRPLEADAATEILQ 871 >UniRef50_Q1K1R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1R0_DESAC Length = 709 Score = 508 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 109/499 (21%), Positives = 196/499 (39%), Gaps = 18/499 (3%) Query: 30 LQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAF 89 + ++ E + + L D+ LT + + A Sbjct: 215 ATKVQQNYQDENGENVSVEKTATLLRNRQDDVTGI-----FLTCRDISENMRQKEDIAYK 269 Query: 90 SMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKN-VDMAILPGTPMVPNKPAIV 148 M + + L+ + N + + L + Sbjct: 270 EMQLEQIL--HYDTLTGLPQRDFFFDLLHSHMVGCQKNNRTLALLYLDLDRFKNINDTLG 327 Query: 149 IWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELT 208 + +L+ N+ +T +L S E + + ++ + + ++V + Sbjct: 328 HTVGDQVLQEVAQRLQNNIRITDNLSRMSGDEFLITLDPADNLSEVTQLAQKFLSVISVP 387 Query: 209 DMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGL---LCYYLMSVR---- 261 + + L+ D T + + M +Y + Sbjct: 388 MKIEHHRFHLTASIGISLFPGDATSPEKLLSCADSAMYRAKESGRDAFRFYKPHMNEKAQ 447 Query: 262 --MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAE 319 + E+ AI++EQ + YQP D ++ G+E L+RW HP G IPP FI AE Sbjct: 448 GLLWLETELRLAIEQEQLELHYQPQYDLNTGQLVGMEALVRWNHPEKGMIPPGEFIPQAE 507 Query: 320 SQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPA 379 +I+PL + + R A + ++ +NI+ + + KLL Sbjct: 508 ETSLIIPLGEWVLNTACRQIAAWHAMGISPIRMAVNISAVQFYRIDLAQMVAKLLDHYGL 567 Query: 380 HHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKI 438 + LEITE ++ + E A + L ++G++++IDDFGTG+S+L YL+RF + LKI Sbjct: 568 PATLLELEITESVLMDDVEAAAETMNKLTAMGIQLSIDDFGTGYSSLSYLKRFPISTLKI 627 Query: 439 DRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWIS 498 DR FIN + + + ++++LA + + +AEGVET EQ +L + QGY + Sbjct: 628 DRSFINDVTINEQDAAIALSIISLAGHMGIEVLAEGVETVEQLSFLQRHACQYGQGYLFN 687 Query: 499 RPLPLDDFVRWLKKPYTPQ 517 RPLP D R LK + P+ Sbjct: 688 RPLPAKDIERQLKTAHLPE 706 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 508 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 91/425 (21%), Positives = 162/425 (38%), Gaps = 25/425 (5%) Query: 116 PLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT----- 170 PL +L L + ++ A+ + + N + + L Sbjct: 920 PLTDLPNRLLLRSHLTHALAQAKRHHNQVGVLYLDLDRFKNINDSLGYQVGDELLVTLTE 979 Query: 171 ---------PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRE-TKIAGI 220 L E + I + + L+ + E G Sbjct: 980 RLTMHMRSEDLLARLGGDEFLLVLEHINEPEDSAIVARSLLETLAQPFVLHGEREIFIGA 1039 Query: 221 PLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYL------MSVRMRPGREIMTA 271 + + ++ +D + M +Y + + + A Sbjct: 1040 SIGISIFPNDGDSAEQLIQHADAAMHQAKTLGRNTYHFYTEDLSRASNEHLELENRLRHA 1099 Query: 272 IKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHL 331 I Q V YQP VD + G E L+RW+ P G + P FI AE +I + + + Sbjct: 1100 ITANQLRVYYQPQVDIATGHIIGAEALVRWQDPERGLVQPGQFIPLAEETGLIGAIGEWV 1159 Query: 332 FELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITER 391 + + +N++P + I K+L ++ LE+TE Sbjct: 1160 LKETCLQGMRWIDAGLPFLTLAVNLSPHQFLRGNIAGLISKVLAETGFPADRLELELTES 1219 Query: 392 DMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTET 450 ++++ ++ ++ L + + +AIDDFGTG+S+L YL+RF LD LKID+ F++ I Sbjct: 1220 ALMQQGEDVIKMLHLLRAQDIRLAIDDFGTGYSSLSYLKRFPLDILKIDKSFVDDIPFHQ 1279 Query: 451 ITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 + ++ + L +AEGVET EQ +L RG + QGY S P+P ++F + L Sbjct: 1280 DDMEIAATIIAMGHILGFKVLAEGVETREQLEFLQARGCDLYQGYLTSPPIPAEEFEKLL 1339 Query: 511 KKPYT 515 K+ Sbjct: 1340 KENMA 1344 >UniRef50_Q3A1F4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1F4_PELCD Length = 703 Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats. Identities = 100/505 (19%), Positives = 187/505 (37%), Gaps = 65/505 (12%) Query: 23 IAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTL--DTCQQAN 80 + V+ + + H+ + K L YF L +R L + QA Sbjct: 244 PSYSVALISNITPHHQAKQKIRQLA---------YFDGLTGLPNRQLFLEHCNSSLTQAR 294 Query: 81 PELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPM 140 + +++ F V D + S + +++ + ++V Sbjct: 295 RNRSPLGVCIIDIDRFKGVNDTYGYES--GDALLKTVSQRLSDCMSREDV---------- 342 Query: 141 VPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSR 200 L E +A + S + + Sbjct: 343 --------------------------------LARLGSDEFAAVIASVGSQDEFSVLAQK 370 Query: 201 LMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVV-GLLCYYLMS 259 +++ + + + L+ D + M G + S Sbjct: 371 MLHCLTEPIQIGEQKLYCSGGMGIALFPVDGVDAEALLKNAATAMHQAKQHGSNNFRFFS 430 Query: 260 --------VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPP 311 R+ + A+ +Q + YQP VD + + G+E LLRW P G + P Sbjct: 431 KGMNRMAWERIEIETGLRRALDLQQLALHYQPQVDLKTGHIIGMEALLRWESPELGRVSP 490 Query: 312 DAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQ 371 FI AE +I+P+ + E R A + ++ +NI+ F + Sbjct: 491 MRFIPLAEETGLILPIGNWVLESACRQAKAWHRAGFPSLRMAVNISARQFKQAGFIDRLD 550 Query: 372 KLLTSLPAHHFQIVLEITERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLER 430 ++ + + +E+TE +++ E + S G+++AIDDFGTG+S L YL+ Sbjct: 551 AIIQRSGINPELLEMELTESLIMEKSDETLMTLVDIKSRGIKLAIDDFGTGYSMLSYLKH 610 Query: 431 FTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVN 490 F +D +K+DR F+ I T + + +A++ +A L + +AEG+ET EQ +L +R Sbjct: 611 FPIDRIKVDRSFVRDIPENTDDAAITEAIIAMAHSLKIEVIAEGIETREQLAFLKDRACE 670 Query: 491 FMQGYWISRPLPLDDFVRWLKKPYT 515 QGY+ RP+P++ L + Y Sbjct: 671 EGQGYYFGRPVPVETAAEILAQQYP 695 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats. Identities = 101/487 (20%), Positives = 189/487 (38%), Gaps = 57/487 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ + + L YF L +R L+ QA E ++V F Sbjct: 227 DITERKRAEEAIQQLA-YFDALTGLPNRTLLRDRVSQLLSQARREGGGFGVLHLDVDRFK 285 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 V D + + + I + Sbjct: 286 GVNDS--LGHACGDVLLSTVAGRIAS---------------------------------- 309 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 ++ + ++ E + + + +++ + Sbjct: 310 --------SIRESDTVARLGSDEFVVILPGVGHEEDVVAVVRKIVEELNRPIVIQGNDIF 361 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGL---LCYYLMS------VRMRPGREI 268 + + +Y D + D+ M +Y R+ + Sbjct: 362 CTASIGIAIYPTDGSSADILLKNADMAMHKAKEFGGDGYQFYSSELNHRAMERLTLETSL 421 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A++R +F + YQP++ + R+ G+E LLRW P G + P FI AE +IVP+ Sbjct: 422 RRALERREFLLHYQPLLGIGSGRIVGVEALLRWDSPELGMVSPARFIPLAEETGLIVPIG 481 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + L ++ + +N++ + F A + +L ++ + LE+ Sbjct: 482 EWVLRSACEQLRALHELGYTELCVSVNVSARQFRHDGFCAMVAAVLAAVGLDPRYLELEL 541 Query: 389 TERDMLKEQEATQ-LFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE +++ E + + L +GV +AIDDFGTG+S+L YL+ F +D LKIDR F+ + Sbjct: 542 TESVIMERSETAKGILRKLKQMGVSLAIDDFGTGYSSLSYLKHFPIDRLKIDRTFVKEVT 601 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + + + +A++ LA LN+ VAEGVET EQ +L+ + +QGY I+RPLP + + Sbjct: 602 VDQDNAAIAEAIVALAHVLNLDVVAEGVETAEQLAFLAALRCDVVQGYHIARPLPPRNLL 661 Query: 508 RWLKKPY 514 +L+ Sbjct: 662 EFLEARQ 668 >UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Proteobacteria RepID=Q21WW2_RHOFD Length = 874 Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats. Identities = 98/484 (20%), Positives = 174/484 (35%), Gaps = 58/484 (11%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTF 96 ++ + L F L +R+ A T A +++ F Sbjct: 416 RDITESKQAERKIQLLAH-FDSLTGLPNRVLLTDRCNLALSAAQRNGTPLALLLLDLDHF 474 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 V D E+ I L + Sbjct: 475 KNVNDS--LGHRVGDEVLIALAGRLKG--------------------------------- 499 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 + ++ E + + + L+ + Sbjct: 500 ---------AVREQDTVCRLGGDEFILVLPE-TNAAGAAHIAEMLLQSALVAFELEPHEL 549 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMS-----GTVVGLLCYYLMSVR----MRPGRE 267 + + L+ D + D M G M R + Sbjct: 550 TVTPSIGIALFPGDGSDFDTLSRCADAAMYRAKKDGRNNYRFFTAEMQARSERTLTLENA 609 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A++R Q + YQP + + RV G E LLRW HP G +PP FI AE+ +I+P+ Sbjct: 610 LRRALERNQLQLHYQPQISLASGRVVGAEALLRWSHPELGAVPPAEFIPVAETCGLILPI 669 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + + + + + +N++ + +L + LE Sbjct: 670 GEWVLRTSVQQLKAWIDAGMLPIALSVNLSSVQFRHADLPELVTSILNEAQLPAHLLELE 729 Query: 388 ITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE + + A + LH GV ++IDDFGTG+S+L YL++F + +KID+ F+ I Sbjct: 730 LTENVAMTDPLGAIAVMNNLHERGVRMSIDDFGTGYSSLSYLKKFRVYKIKIDQSFVRDI 789 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 ++ ++ A++++A L M T+AEGVET Q +L +G +QGY+ SRPLP++ F Sbjct: 790 TEDSDDKAIVGAIISMATSLGMQTIAEGVETEGQLEFLKAKGCTEVQGYYFSRPLPVEQF 849 Query: 507 VRWL 510 ++ Sbjct: 850 EAFM 853 >UniRef50_Q1JW23 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JW23_DESAC Length = 951 Score = 507 bits (1307), Expect = e-142, Method: Composition-based stats. Identities = 104/523 (19%), Positives = 192/523 (36%), Gaps = 64/523 (12%) Query: 7 NFGRKLLLTCIVAGVMIAILVSC-----LQFLVAWHKHEVKYDTLITDVQKYLDTY--FA 59 F R+ V V ++ S + + + + + + ++ LD Sbjct: 474 AFRRRDGTIISVEYVATPLIGSAGQHEGAVLIFKDLTRQQQAEERLEEKKQLLDHMSNHD 533 Query: 60 DLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPL 117 L +R Q ++A + + +++ F + D ++ I + Sbjct: 534 SLTGLPNRRLFQDRLYHAIERARRSSSEMSVLFIDLDRFKKINDS--LGHELGDKLLISV 591 Query: 118 NELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSS 177 + + + ++ +A L G V Sbjct: 592 ARRMQS-HLRRSDTLARLGGDEFV------------------------------------ 614 Query: 178 RQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVW 237 + + + + L+N + + Y D Sbjct: 615 -----VILEESSHSHFAAVIARNLLNELSEAFDVESHRLFVTASIGISRYPYDAEDVVGL 669 Query: 238 YAFLLGGMSG---TVVGLLCYYLMSVR------MRPGREIMTAIKREQFYVAYQPVVDTQ 288 + M +Y + + ++ A+ EQF V YQP D + Sbjct: 670 MSSADAAMYHAKSRGRNNFQFYAPEMNGRAQDFLEMETQLRDALALEQFEVYYQPQYDMR 729 Query: 289 ALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPV 348 + G E LLRW HP G +PP FI AE IVP+ + + + R + Sbjct: 730 DQTLVGAEALLRWNHPERGMVPPGDFIALAEETGAIVPIGEWVLMQVCRQNRQWMDEGLT 789 Query: 349 GVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKE-QEATQLFAWLH 407 V+ +NI+ S + ++++L + LEITE ++++ +E L L Sbjct: 790 PVRVAVNISIAQFRS-NLSQTLEQVLEQSGMPAELLELEITESMLMEDEEETITLLNELK 848 Query: 408 SVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLN 467 G+ I+IDDFGTG+S+L YL + +D LKIDR FI + + + +++ L + ++ Sbjct: 849 EKGLHISIDDFGTGYSSLSYLRKLPVDKLKIDRSFIAHVVHNQSDAAITGSIIALGQNMD 908 Query: 468 MLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 + +AEGVE EQ +L + QG+ +RP+ +DFVR L Sbjct: 909 LRILAEGVEHEEQRDFLLQHRCYIAQGFLYARPMTAEDFVRLL 951 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 507 bits (1306), Expect = e-142, Method: Composition-based stats. Identities = 104/477 (21%), Positives = 175/477 (36%), Gaps = 55/477 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLV 99 +V T + + L +R T A A +++ F LV Sbjct: 256 DVTARTHAEKRLIHQAS-HDALTGLPNRNLLNDRITHAIARSRGRLTAVMFLDLDRFKLV 314 Query: 100 KDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNS 159 D + + + + + A + G Sbjct: 315 NDS--YGHAVGDALIREVANRVSAC---------LRAGD--------------------- 342 Query: 160 GVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAG 219 ++ E + + + +++L + + Sbjct: 343 ------------TVARLGGDEFVVLLEDLASIEDAARLAAKLRDRLSESVRIGSLELPLS 390 Query: 220 IPLTVRLYADDWTWNDVWYAFLLGGMSG---TVVGLLCYY------LMSVRMRPGREIMT 270 + V L D ++ M C+Y R+ E+ Sbjct: 391 ASIGVALAPRDGRDPEMLLKNADIAMYRAKERGRNNYCFYGPEMDHHARRRLTVESELRR 450 Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 A+ + YQP VD +TG E L+RWRHP + P FI AE +IVPL + Sbjct: 451 ALAGGELEAHYQPQVDLATGALTGAEALVRWRHPERCLLLPGEFIAVAEETGLIVPLGEQ 510 Query: 331 LFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITE 390 + R + + +K +N++ + +L AH Q+ LEITE Sbjct: 511 VLRAACRQSTRWREAGRPDLKVAVNLSGHQFRQHDLVEQVCDILAETGAHAAQLELEITE 570 Query: 391 RDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTE 449 + + + + A L G+ +AIDDFGTG+S+L YL+RF +D LKIDR FI I + Sbjct: 571 SVAMADADGSVATLAGLRRQGIALAIDDFGTGYSSLSYLKRFPIDTLKIDRSFIQGIPAD 630 Query: 450 TITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 + ++ A++ +A+ L + +AEGVETP Q +L +G QG+ R +P +DF Sbjct: 631 GDDTAIVQAIIAMARSLRLSLLAEGVETPAQREFLVAQGCRSGQGFLFGRAMPAEDF 687 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 507 bits (1306), Expect = e-142, Method: Composition-based stats. Identities = 110/484 (22%), Positives = 180/484 (37%), Gaps = 57/484 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ ++L Y L +R L + +A A Sbjct: 369 DITARKRAEADIQHLA-YHDTLTGLANRFSLTARLQLSVAEARRNGQRLAVMF------- 420 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 L ++ + LLK Sbjct: 421 -------------------------------------LDLDRFKHINDSLGHPVGDELLK 443 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 + T ++ E + I G ++ +++L+ Sbjct: 444 QVARRLRDAVRETDTVARLGGDEFVVVLQGIGGAHDVTHVAAKLLAQLSAPYCVDTTELH 503 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMS---GTVVGLLCYYL------MSVRMRPGREI 268 + + L+ DD M +Y + R+ R++ Sbjct: 504 TTASIGISLFPDDSADPAALMRNADTAMYHAKAAGRAKFQFYTDEMNRAATARLDLERKL 563 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A+ R +F + YQP D++ +TGLE L+RWRHP G I P FI AE +IV + Sbjct: 564 RGAVARGEFELWYQPQFDSRHGHLTGLEALVRWRHPQDGLIAPLRFIPLAEETGVIVEIG 623 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + R A + ++ +N++ L + + L + + LEI Sbjct: 624 TWVLREACRQARQWLDAGLPELRISVNLSVRQLREKCLVDTVWTTLAASGLRPGLLELEI 683 Query: 389 TERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE ++ EA L L ++GV IAIDDFGTGHS+L YL+ F LD+LKIDR FI+ I Sbjct: 684 TESAVMDNPDEAVALLQALKNLGVRIAIDDFGTGHSSLSYLKLFPLDHLKIDRSFISDIE 743 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + + ++ A ++LA L + +AEGVE+ Q L E G + +QG+ SRP+ D Sbjct: 744 HDANDTMIVAAAVSLAHNLGLSVIAEGVESAVQVARLRELGCDELQGFHFSRPVTADVVE 803 Query: 508 RWLK 511 L+ Sbjct: 804 NLLR 807 >UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2X0_PELCD Length = 643 Score = 506 bits (1305), Expect = e-142, Method: Composition-based stats. Identities = 102/487 (20%), Positives = 188/487 (38%), Gaps = 58/487 (11%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTL--DTCQQANPELTARAAFSMNVRTF 96 ++ + + Y L +RL +A+ A +++ F Sbjct: 177 RDITGKKAREHEIRQIA-YSDALTGLPNRLALKMDMDKALAKASRNTAMVAVLMLDLDDF 235 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 + D T + EM + L + Sbjct: 236 KQIND--TTGHAKGDEMLLLLTSRLRE--------------------------------- 260 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNE-LTDMPVRET 215 L SL E + I T + + +++ V Sbjct: 261 ---------QLGEKDSLARLGGDEFVVVLNEIDSATCAAKKTEKILASLRDNPFDLVVAK 311 Query: 216 KIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMS--------VRMRPGR 266 A + + L+ + + M VG Y S R + Sbjct: 312 VFASASIGIALFPQNGRDAETLLKHADMAMYEAKNVGRNTYRFFSDELHRRTIERHKLEV 371 Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 + A+++++F++ YQP VD R+ LE L+RW+HP AG + P FI AE +I Sbjct: 372 GLRRAVRKKEFFLVYQPQVDLGTGRIVALEALVRWQHPEAGVLLPSTFIPVAEETGLIHI 431 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 + + + A + +++ ++ +N + I+++L + L Sbjct: 432 MGEWILRTACHQAMQWQRMGLPPMRIAVNFSARQFRQPDLVERIEQILLESGLPPHHLEL 491 Query: 387 EITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 EITE ++ E A + L + ++IAIDDFGTG+S+L YL+ F LD LKI + F+ Sbjct: 492 EITESVFMENLESAIETLVDLKTRAIQIAIDDFGTGYSSLNYLKNFPLDRLKIAQDFVRD 551 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 I + + +++ ++ +A RL + +AEGVET EQ +L +G + MQG++ +RP+ ++ Sbjct: 552 IPDDEDDATIIETIMAMANRLGIKVLAEGVETMEQVTFLRRKGCHEMQGFYFARPMQAEE 611 Query: 506 FVRWLKK 512 +L + Sbjct: 612 IAGFLNQ 618 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 506 bits (1304), Expect = e-142, Method: Composition-based stats. Identities = 101/487 (20%), Positives = 180/487 (36%), Gaps = 54/487 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ + + L +F L +R L A +T A +++ F Sbjct: 445 DLTQRKAAEEKIENLA-FFDPLTKLPNRRLLLDRLKQAMASATRSVTNGAVLFIDLDNFK 503 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 + D T+ + + + + + + ++ G V Sbjct: 504 ALND--TYGHPMGDLLLQQVAKRLVS-SVRDGDTVSRFGGDEFV---------------- 544 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 + E+ + + T ++ + Sbjct: 545 ---------------VLLEGFDEN-----PLDAASQAETVGEQIFAALRQPYLIGTHEYH 584 Query: 218 AGIPLTVRLYAD-----DWTWNDVWYAFLLGGMSGTVVGLLCYYLMSV----RMRPGREI 268 + L+ D D A G V M R ++ Sbjct: 585 GTSSIGATLFNDKQQSIDELMKQADIAMYQAKKEGRNVLRFFDPQMQETIAKRTALEGDL 644 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 AI+ QF + YQ VD ++ G E L+RW HP G + PD FI AE +I+P+ Sbjct: 645 RKAIENHQFQLHYQIQVD-ESRHPFGAEALIRWFHPEHGMVSPDQFIPLAEESDLILPIG 703 Query: 329 QHLFELIARDAAELE-KVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + E + G +N++ F +Q L+ + + LE Sbjct: 704 YWVLETACARIQRWQHDAKTSGFVLSVNVSAKQFRQTDFVNQVQSLIQQYEINPSLLKLE 763 Query: 388 ITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE +L ++ + L +GV+ ++DDFGTG+S+L YL+R LD LKID+ F+ I Sbjct: 764 LTESMLLDNIEDTIATMSALKELGVKFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFVRDI 823 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 + ++ ++ +A L++ +AEGVET EQ + LS +G QGY +P+P++ F Sbjct: 824 AVDASDRAIVRTIIAMAHSLDLDVIAEGVETEEQQKHLSSKGCKNFQGYLFGKPVPIEQF 883 Query: 507 VRWLKKP 513 L+K Sbjct: 884 ETSLRKS 890 >UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Variovorax paradoxus S110 RepID=C5CTK8_VARPS Length = 1107 Score = 506 bits (1304), Expect = e-142, Method: Composition-based stats. Identities = 115/500 (23%), Positives = 195/500 (39%), Gaps = 57/500 (11%) Query: 31 QFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAA 88 ++A + K +++ + L +R LQ +++N A Sbjct: 647 LRVIALQIAQYKQRKQAERSLRFMAS-HDGLTGLFNRAALQHELARAIKRSNRHQKQFAV 705 Query: 89 FSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIV 148 +++ F + D T EM E + AL Sbjct: 706 IFVDLDRFKHIND--TLGHGVGDEMIKICGERLTAL------------------------ 739 Query: 149 IWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELT 208 L + E + + + + +++ Sbjct: 740 ------------------LREADVVARFGGDEFVLLLENLSSANDAAGLAEKVLACCAEP 781 Query: 209 DMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSG---TVVGLLCYYLM------S 259 + V +Y D+ + M +Y + Sbjct: 782 FFLAGRELHVSASVGVSIYPDNGADAEALLKNADTAMYRAKERGRNTFRFYAAKMNAQNT 841 Query: 260 VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAE 319 ++ + A++R + + YQP +D Q R+ G+E L+RW HP+ G IPP FI AE Sbjct: 842 EQLMLESALRHALERGELEMHYQPKMDLQTQRIVGVEALMRWHHPILGMIPPVQFIPIAE 901 Query: 320 SQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPA 379 +IV L + E D+ +K V +N++P S + ADIQ +L + Sbjct: 902 ELGLIVSLGKWALERACADSRSWQKYGLPKVLMSVNLSPRQFESRTLIADIQAVLEASGL 961 Query: 380 HHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKI 438 + LEITE ++ E A +L + +GV +AIDDFGTG+S+L YL+ F L +KI Sbjct: 962 EPSLLELEITEGAVMANPEHAAKLLRAIRDMGVGLAIDDFGTGYSSLSYLKHFPLSTVKI 1021 Query: 439 DRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWIS 498 DR FIN + + ++D ++TLA L M VAEG+ET Q +L G + QGYW+ Sbjct: 1022 DRSFINDLSQDADARALIDGIITLAHGLRMKVVAEGIETTAQLDYLRSHGCDEAQGYWLC 1081 Query: 499 RPLPLDDFVRWLKKPYTPQW 518 +P+P D+ ++ + Q+ Sbjct: 1082 KPVPADEVRNFMARHLRNQF 1101 >UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWZ7_9PROT Length = 1217 Score = 506 bits (1304), Expect = e-142, Method: Composition-based stats. Identities = 97/487 (19%), Positives = 181/487 (37%), Gaps = 58/487 (11%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTF 96 D ++ L +R+ A + A +N+ F Sbjct: 766 RTRVAHKEAEDRLDFMAH-HDALTGMPNRILLHDRFEQVAATARRRGSNVAMLFLNLDDF 824 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 LV D S M + + E + Sbjct: 825 HLVND--VLGRSLADHMLVQVVERLHGC-------------------------------- 850 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 + + ++ E + + A+ ++++ Sbjct: 851 ----------IRESDTISREGGDEFIILLGDVGDLAAIEIIVQKILDAFSEPFTVDDHIV 900 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMSVRM--------RPGRE 267 + + ++ +D + + + G Y + +M + + Sbjct: 901 SVTSSIGISIFPNDGRDFNRLISQSEAALQKAKAAGKDTYNFFTEQMNINALEHMQLQGQ 960 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + AI ++F + YQP +DT R+ G E L+RW+HP G +PP FI AE +I+PL Sbjct: 961 LRHAIINQEFRIYYQPQIDTLNERMIGAEALVRWQHPQHGLVPPLKFIPLAERSGLIIPL 1020 Query: 328 TQHLFELIARDAAELEKVL-PVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 + + R A K + +N++ + + + L + L Sbjct: 1021 GEWVLNEACRQAQVWRKRNRMPSMVMAVNLSAVQFKRGNIVETVIQALERSGLPAENLEL 1080 Query: 387 EITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 E+TE +L + E + L +G++++IDDFGTG+S+L YL+R +D LKID+ F+ Sbjct: 1081 ELTESILLDDVEVVMETLHRLKDIGIKLSIDDFGTGYSSLSYLKRLAVDKLKIDQSFVRD 1140 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 + + + ++ A++ L L + +AEGVET Q + L N +QGY SRP+P +D Sbjct: 1141 MVVDPEDAAIVSAIIQLGHTLQLTVIAEGVETRAQLQLLKSLECNEVQGYLFSRPIPAED 1200 Query: 506 FVRWLKK 512 F ++ Sbjct: 1201 FSGLFEQ 1207 >UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H2G8_METFK Length = 633 Score = 506 bits (1303), Expect = e-142, Method: Composition-based stats. Identities = 110/513 (21%), Positives = 201/513 (39%), Gaps = 31/513 (6%) Query: 30 LQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAF 89 +Q HK E+ + +Q + +++K +L T L A A Sbjct: 119 VQRHSDMHKSEIWQPVVYGGMQVGMLYMRSNMKGLYRQLLWYVGTTVMVMLVTLFAAALL 178 Query: 90 SMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAI-V 148 ++ +L +++ A + +P +L G A+ V Sbjct: 179 LSRLQRAMLKAEER-----AGFLANYDTVTDLPNRHAFSRHFHLLLEGARHRRGVLALLV 233 Query: 149 IWYRNPLLKNSGVFAALNLNLT--------------PSLFYSSRQEDYDGVALIIGNTAL 194 + + N + + L +++ E + + Sbjct: 234 FDLDDFKVINDTLGHDVGDKLLHLVAQRLMVAAGKKNTVYRVGGDEFAMMLDQPADVENV 293 Query: 195 STFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLL 253 ++R + + G+ + +Y D M G Sbjct: 294 EAVANRFIRALAPPIVLNDRNFYIGVSIGASIYPYDGEDAAHLLRDADAAMYYAKSRGKN 353 Query: 254 CYYLMSV--------RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPV 305 + + S R+ E+ A++ +QF + YQP ++ G+E L+RW HP Sbjct: 354 NFQMFSAEMHHKSSTRLLLETELRVALEEKQFELYYQPQFSLPDCKLVGVEALIRWHHPQ 413 Query: 306 AGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSES 365 G + P +FI AE +IV + + + R A E + + ++ +N++ E+ Sbjct: 414 RGLLCPSSFIPVAEETGLIVRIGEWVLREACRQAMEWKALGV-PLRMSVNLSGRQFRQEN 472 Query: 366 FKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQL-FAWLHSVGVEIAIDDFGTGHSA 424 + K++ + LEITE ++++ EAT A L ++G+ +AIDDFGTG+S+ Sbjct: 473 LVQTMTKIIERTGMDSSLLELEITETVLMEDAEATTTRLADLKAMGMHLAIDDFGTGYSS 532 Query: 425 LIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWL 484 + YL+RF + LKIDR FI I + + A + +A L + VAEGVET Q ++L Sbjct: 533 MAYLKRFPVSRLKIDRSFIRDIPNDPDDVAITTATIQMAHSLKLEVVAEGVETKAQLQFL 592 Query: 485 SERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQ 517 E+G + +QGY SRP+ + + Q Sbjct: 593 REQGSDMVQGYLFSRPVSAREMAELVITGKGHQ 625 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 101/423 (23%), Positives = 176/423 (41%), Gaps = 24/423 (5%) Query: 112 EMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT- 170 + L L L + + ++ A+ + I L N + L Sbjct: 504 ALHDALTGLPNRLLLEERLENALSDAKSHQWQLAVLFIDLDRFKLVNDTLGHHEGDQLLV 563 Query: 171 -------------PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 ++ E + I G+T ++ + + + Sbjct: 564 EVANRLHQVIGANDTVARLGGDEFVIVLNEIAGSTEINGVIEDIQQNFKPAVKLALQDMF 623 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMSV--------RMRPGREI 268 + V +Y +D M G C + R+ + Sbjct: 624 VTPSIGVAIYPEDGETPVQLMKNADAAMYHAKASGRNCAQYFNRSLDDSLKERISLENAL 683 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A+K QF + YQP +D ++ R+ G E L+RW HP G I PDAFI AE +IV + Sbjct: 684 NQALKLGQFELYYQPQLDVKSNRIIGAEALIRWNHPEKGMISPDAFIPLAEESGLIVDIG 743 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + A+ K + +N++ + ESF ++ ++ + LE+ Sbjct: 744 SWVLHQASSQLAQWRKQGFDQLSVSVNLSALQVQKESFAREVADVIREYGVPEACLDLEL 803 Query: 389 TERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE +++ +E +H++G++I++DDFGTG+S+L YL+RF LD LKIDR F+ I Sbjct: 804 TESMIMRNAEETIAALDKIHNLGIQISVDDFGTGYSSLSYLKRFPLDKLKIDRSFVQDIT 863 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 +T + + ++++A LN+ +AEGVET Q L + G QGY ++PLP++ Sbjct: 864 VDTDDAMICKTIISMAHNLNLQVIAEGVETNAQLELLRDYGCEQYQGYLFAKPLPVEQMT 923 Query: 508 RWL 510 L Sbjct: 924 EHL 926 >UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQL8_BACS4 Length = 1016 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 92/484 (19%), Positives = 179/484 (36%), Gaps = 47/484 (9%) Query: 41 VKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLD--TCQQANPELTARAAFSMNVRTFVL 98 + +L + L +R + A+ +++ F + Sbjct: 568 ISEKKQQEKQIMHLA-FHDGLTGLPNRRLLRSRLELAMTDADRYNYKLGLLLIDLDRFKV 626 Query: 99 VKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKN 158 + D T A E+ + +++ L + + Sbjct: 627 IND--TLGHQAGDELIQKVADVL-ELTMRSPDTHSR------------------------ 659 Query: 159 SGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIA 218 ++ E + I + L ++ ++ + + Sbjct: 660 -------AKQEHTTVARLGGDEFIILLTHITDVSDLQASANLIIEKFKEPFFIQNQDVFT 712 Query: 219 GIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMS---------VRMRPGREIM 269 + + +Y D D M M R + ++ Sbjct: 713 SASIGISVYPDHGRDYDSLTGNADIAMYRAKENGKNQMEMYSSEINTLTMERFQMENQLR 772 Query: 270 TAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQ 329 A++RE+F + YQP + V G+E LLRW G + P FI AE +I+P+ Sbjct: 773 KALEREEFVLHYQPQFHLENNEVLGIEALLRWNSSDRGIVSPMEFIPLAEETGLIIPIGY 832 Query: 330 HLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEIT 389 + + R +NI+ L + F ++ +L + LEIT Sbjct: 833 WVLKEACRQNKRWMDQGHRPKIVSVNISARQLQEKDFVQAVKSILEDTQLPTQYLCLEIT 892 Query: 390 ERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGT 448 E +K + + + L +G++IAIDDFGTG+S+L L++ + +KID+ FI + Sbjct: 893 ESTAIKNIDISMNMLKELGELGIKIAIDDFGTGYSSLAMLKQLPISNIKIDKSFIRDMDV 952 Query: 449 ETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVR 508 + ++ A++ +A L + AEGVET +Q L + N++QGY S+PLP ++ +R Sbjct: 953 DKDDGAIVRAIIAMAHSLELTVTAEGVETEDQKNILLQEKCNYLQGYLYSKPLPAEECLR 1012 Query: 509 WLKK 512 ++++ Sbjct: 1013 FVQE 1016 >UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Marinomonas RepID=A6VW49_MARMS Length = 659 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 104/498 (20%), Positives = 180/498 (36%), Gaps = 57/498 (11%) Query: 29 CLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPL--TLDTCQQANPELTAR 86 + +V H+++ + L+ Y L +R A Sbjct: 204 PMTNVVYLLTHDIQEERDHEVALYRLNNY-DGLTHLPNRNLLYQQLESALVNARKRHRQF 262 Query: 87 AAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPA 146 +++ F ++ D F E+ + E I + Sbjct: 263 GLLYLDLDGFKVINDN--FGHRVGDELIQRVAERIKGSIPSS------------------ 302 Query: 147 IVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNE 206 L+ E + L + + +M Sbjct: 303 ------------------------ACLYRLGGDEFVVVLENTNEIEELESIAQSIMQNAS 338 Query: 207 LTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVV---GLLCYYL------ 257 T + + + + Y D M + C Y Sbjct: 339 NTYPVAKMEMMITASIGIASYPQHADDVDNLLKNADAAMYRAKSTGHNMYCVYEDHMADN 398 Query: 258 MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 ++ + G + AI+ EQF + YQP + V G E L+RW HP G I PD FI Sbjct: 399 INAHLTLGGGLRKAIEEEQFILHYQPKIRLPDEIVVGAEALIRWVHPELGMISPDQFIPL 458 Query: 318 AESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSL 377 AE +I+PL + + R E + +K +N++ +Q+ L Sbjct: 459 AEESGLILPLGEWVIRRACRQLQEWREAGLDPIKLSVNLSSRQFMQADLVDMVQRALEET 518 Query: 378 PAHHFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYL 436 + LE+TE ++ + ++ + +G+ ++IDDFGTG+S+L YL++F + L Sbjct: 519 GVDPEYLELELTESMLMADAQQSIEKLHSFRKLGLTLSIDDFGTGYSSLAYLKKFPIQTL 578 Query: 437 KIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYW 496 KIDR FI+ +G + ++ A + +A LN+ +AEGVE Q L+ +QGY Sbjct: 579 KIDRSFIHDLGLDCDNDAIVKATIAMANSLNLKVIAEGVENRSQVDVLNGYDCQEVQGYL 638 Query: 497 ISRPLPLDDFVRWLKKPY 514 S+PL DDF+ +LK Sbjct: 639 FSKPLSSDDFLMYLKAHS 656 >UniRef50_Q47HF3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q47HF3_DECAR Length = 994 Score = 505 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 95/483 (19%), Positives = 181/483 (37%), Gaps = 57/483 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ + +YL +Y L +R A A +++ F Sbjct: 406 DLSERQAAAERIQYLSSY-DTLTELPNRHLFDDRLNQALLTARRFERGTALILLDLNRFR 464 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 L+ D T A E+ + + + L + + + G Sbjct: 465 LIND--TLGPPAGDEILVEVTRRLK-LQVREGDTVGRRAGN------------------- 502 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 E +A + + R+++ + ++ Sbjct: 503 ----------------------EFGFVMANLSHERDALALAQRMLDAISVPFSVAGQSVA 540 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYL------MSVRMRPGREI 268 + + ++ + + + +Y + R+ + Sbjct: 541 ITASIGISVFPKNGENGEAMLRSADAALLRAKQSGRNTFSFYSPEMDADAARRLSIESAL 600 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A+ R++F V YQP V + + G+E LLRW + G I P FI AE +I+ + Sbjct: 601 RDALARDEFCVHYQPQVSLDSGHMIGMEALLRWNSALLGPISPVEFIPIAEETGLIMQIG 660 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + + + +N++P A + L + LEI Sbjct: 661 DWVLRTACHQTKAWLDLGLLPLHVAVNLSPRQFRQADLPAQVAHALAESGLPAGALELEI 720 Query: 389 TERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE + + +A + + L S+G+++++DDFGTG+S+L Y+ RF D +KID+ F+ I Sbjct: 721 TESAFIDDIDDAVAMCSKLKSLGIKLSLDDFGTGYSSLAYVSRFPFDKIKIDQSFVRDIV 780 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + + + A + + + LN+ +AEGVET QA +L R + +QGY SRPLP ++F Sbjct: 781 NNPVNAAIASAAIVMGRSLNLSVLAEGVETEAQAAFLRSRRCDAIQGYLFSRPLPPEEFA 840 Query: 508 RWL 510 L Sbjct: 841 PLL 843 >UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiatoa sp. PS RepID=A7BQZ3_9GAMM Length = 576 Score = 505 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 90/422 (21%), Positives = 181/422 (42%), Gaps = 25/422 (5%) Query: 116 PLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT----- 170 PL +L + + + + T + + + N + N GV + + Sbjct: 145 PLTKLPNRNLLLERLRQTLGRATRTHQDIAILALDLDNFQMINDGVGHDVGDKVLHEVAQ 204 Query: 171 ----------PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGI 220 ++ S E +S + L++ + + + Sbjct: 205 RLTQTVSKIGATVARLSGDEFVVIEESDNLVKDVSEMAQGLLDNLSRSMVIDHHEMVVTA 264 Query: 221 PLTVRLYADDWTWNDVWYAFLLGGMS---GTVVGLLCYYLMSV------RMRPGREIMTA 271 + + +Y D + M+ ++ + R+ ++ Sbjct: 265 SIGISVYPSDGEEAAILLKNADTAMARAKAAGKNTYQFFKAEMNKAAFERLMLENQLRKV 324 Query: 272 IKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHL 331 + + + YQP ++ + ++ G+E LLRW+HP G P F+ AE +IVP+ + + Sbjct: 325 LSNNELILYYQPQIELSSGQLVGMEALLRWQHPEFGICSPVKFVPVAEEMGLIVPIGEWV 384 Query: 332 FELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITER 391 + +++ V+ +N++ ++ I++ L + + LE+TE Sbjct: 385 LRTACQQNQTWQQLGFPPVRVSVNVSSRQFFRDNLLQIIKEALADSNLNPIYLELELTES 444 Query: 392 DMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTET 450 ++ E+ +L + ++GV IAIDDFGTG+S+L YL+RF LD LKIDR F+ I ++ Sbjct: 445 VLMAEESGIFELLTEVQNMGVHIAIDDFGTGYSSLSYLKRFPLDVLKIDRSFVKDICSDG 504 Query: 451 ITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 + + A++ +A L + VAEGVET Q +L ++ + +QGY+ SRP+ + + L Sbjct: 505 NDAAITTAIIAMAHSLGLSVVAEGVETQGQLTFLQQQHCDVIQGYYFSRPICSEKMTQTL 564 Query: 511 KK 512 ++ Sbjct: 565 QR 566 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 505 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 102/481 (21%), Positives = 183/481 (38%), Gaps = 33/481 (6%) Query: 47 ITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFC 106 + F D+ L A L R L+ D+ Sbjct: 627 AQGEVSHFIAIFNDVTERVRYEAELEQQATHDALTGLANR----------NLLNDRMQ-- 674 Query: 107 SSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALN 166 +I A V + +L ++ + LL+ + + + Sbjct: 675 -----------RAIIRAARDGHAVAVMLLDLDRFKLINDSLGHAAGDALLQETARRLSAS 723 Query: 167 LNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRL 226 + ++ E ++ + A + +++++ + +A + V L Sbjct: 724 VRRGDTVARLGGDEFMVVMSDMSAEDAAAALAAKVLESLAEPMLLNGREIVATGSIGVSL 783 Query: 227 YADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSV------RMRPGREIMTAIKREQF 277 Y D M +Y + R+ + A++ ++ Sbjct: 784 YPRDGEAAATLLKHADVAMYRAKELGRNRFQFYAPEMNERILERLELENSLRRALENDEL 843 Query: 278 YVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIAR 337 + YQP V + RV G E L+RWRHP G + P FI AE +IVP+ + + + R Sbjct: 844 ELHYQPKVSLRDGRVIGAEALIRWRHPQLGMVSPADFIPLAEETGLIVPIGEWVVDHACR 903 Query: 338 DAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDML-KE 396 + +N++ E + + L + Q+ +E+TE ++ + Sbjct: 904 QLRAWLDAGLPQISVAVNVSARQFQHEQLTHVLARALAAHRLPPGQLHVEVTESAVMCEP 963 Query: 397 QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVL 456 + L ++GV I++DDFGTG+ +L YL+RF +D +KIDR F+ + T + + Sbjct: 964 ERTIFTLRELKNIGVRISLDDFGTGYCSLNYLKRFPIDSIKIDRCFVTDLATSAEDAAIA 1023 Query: 457 DAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTP 516 +++LA LN +AEGVE Q +L G + MQG+ SRPLP +F R L Sbjct: 1024 LMIVSLAHSLNQTVIAEGVENEAQLDFLRRHGCDEMQGFLFSRPLPAAEFARLLAAGTRL 1083 Query: 517 Q 517 Q Sbjct: 1084 Q 1084 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 505 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 113/491 (23%), Positives = 195/491 (39%), Gaps = 58/491 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ + ++L F L S +R +Q A + A +++ F Sbjct: 490 DLTERKAADERIQFLAH-FDVLTSLPNRIHMQDRVELAIHNAVRDNQRLALLLLDLDRFK 548 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 V + SA + + I ++ Sbjct: 549 TVNES--LGHSAGDTLLQVAADRIKSVMAPG----------------------------- 577 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 L E + +I + + R+ +V Sbjct: 578 -------------EMLARQGGDEFIILLPVISDPGEAALAAERVRDVFANPIELHNHVLT 624 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMS-----GTVVGLLCYYLMSVR----MRPGREI 268 + + +Y DD + M G ++ R + ++ Sbjct: 625 ITPSIGISVYPDDGRDYETLVRNADAAMYHAKSSGRNSYKFYTADLNARAREILAIESQL 684 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A++R++F + YQP V+ ++ R+ G E L+RW HP G + P FI AE + IV + Sbjct: 685 RFALERDEFVLHYQPQVEMESGRIVGAEALIRWNHPSLGLLGPVRFIQVAEERGFIVQIG 744 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + R E + + IN++ +++ L S + +E+ Sbjct: 745 NWVIAEATRQLVEWRRAGLPELTLAINLSALQFRQPDLALQVKQALESSGLPGHALDIEV 804 Query: 389 TERDMLKEQEA-TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE ++++ +A Q + ++G+ ++IDDFGTG+S+L YL+RF D LKIDR F+ I Sbjct: 805 TESIIMEDAQATIQTIDNMKNMGLRLSIDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIP 864 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + S + A++ +AK LNM VAEGVET EQ ++L + G +F+QGY I++PLP DDF Sbjct: 865 QDADDSAIARAIINMAKNLNMQVVAEGVETMEQWQFLEQEGCDFVQGYLIAKPLPADDFA 924 Query: 508 RWLKKPY-TPQ 517 L K PQ Sbjct: 925 ELLHKDSLLPQ 935 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 100/484 (20%), Positives = 175/484 (36%), Gaps = 53/484 (10%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDRL--QPLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ L Y+ L +R Q QQA +++ F Sbjct: 963 DISERKASERRIHRLA-YYDALTHLPNRTLFQDRLHTALQQAERNGQWVVLMFLDLDRFK 1021 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 + D +A M + + A ++++ +A + G Sbjct: 1022 PINDS--LGHAAGDRMLQEVATRLSAC-VSQDDTVARMGGDEFT---------------- 1062 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 L S + I + ++ Sbjct: 1063 --------------LLLPSQGDRE-------IALKRAIQVAELILGRLARPFTLEGREFF 1101 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSV------RMRPGREI 268 + V L D + M +Y + R+ ++ Sbjct: 1102 VTASIGVALSPQDGAELSLLMKNADTAMYHAKEMGKNNFQFYQAEMNARALERLELESDL 1161 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A++ +F + YQP R+TG E LLRW+HP G +PP FI E ++ + Sbjct: 1162 RRALELGEFVLHYQPQFTGDGRRLTGAEALLRWQHPRRGLVPPSEFIPVLEEIGLVAQVG 1221 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 L + K K +N++ I +L + LE+ Sbjct: 1222 DWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFADGQLGERIAAILYETGIPPACLELEL 1281 Query: 389 TERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE ++ + EA Q+ + L +G+ IA+DDFGTG+S+L YL++F +D LKIDR F++ + Sbjct: 1282 TESILMSDVAEAMQILSGLKRLGLAIAVDDFGTGYSSLNYLKQFPIDVLKIDRSFVDGLP 1341 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + + A++ +A LN++ +AEGVE+ Q +L E G + +QGY RP+P + F Sbjct: 1342 HGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQGYLFGRPMPAEQFG 1401 Query: 508 RWLK 511 Sbjct: 1402 MLYA 1405 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 102/489 (20%), Positives = 194/489 (39%), Gaps = 58/489 (11%) Query: 38 KHEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRT 95 + T +L Y+ L +R L+ A+ + + +++ Sbjct: 478 ARDTTEQTEAEKNIHFLA-YYDVLTGLPNRTLLRDRLGQMIAVAHRDKHQFSLIFLDL-- 534 Query: 96 FVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPL 155 ++ + L Sbjct: 535 ------------------------------------------DRFKYINDSMGHSVGDRL 552 Query: 156 LKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRET 215 L++ + + ++ E + G +A S + +L+ + Sbjct: 553 LQSVALRIQDCVREGDTVARLGGDEFIVLLREA-GESAASVVAQKLLIALATPYDLDGQV 611 Query: 216 KIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSVRM------RPGR 266 + + +Y D D M +++ + + Sbjct: 612 ISTQASIGISIYPDQAQDADTLIKNADMAMYRAKEEGRNNFQFFVPEMNFRVDLLFSMEK 671 Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 ++ A++R + ++ YQP D + ++G+E L+RW HPV G++ P FI AE IV Sbjct: 672 DLRLALERGELFLQYQPQADLASGTLSGVEALIRWDHPVKGQVSPAEFIPVAEETGQIVA 731 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 + + + AE K + +N++ L I+ +L + L Sbjct: 732 IGEWVLRTACSQMAEWRKTGMHDLTIAVNLSIRQLRQPDLAELIKSVLLETGLDARHLEL 791 Query: 387 EITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 EITE M+ + +A + + + +GV+++IDDFGTG S+L YL++ ++ LKID+ FI Sbjct: 792 EITEGIMMGDNQAAFRFLSEMQDLGVQLSIDDFGTGFSSLNYLKQMPVNKLKIDQSFIRD 851 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 I T+ + ++ ++++L RLN+ +AEGVET EQ +L RG + +QGY+ SRPL +D Sbjct: 852 IETDEGDAAIIRSIISLGHRLNLRVIAEGVETQEQLDFLRIRGCDEIQGYFYSRPLLAED 911 Query: 506 FVRWLKKPY 514 F+R++K P Sbjct: 912 FMRFVKAPP 920 >UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HTT7_9BACT Length = 860 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 97/494 (19%), Positives = 178/494 (36%), Gaps = 55/494 (11%) Query: 33 LVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFS 90 V ++ + YL Y L +R L A A Sbjct: 409 FVTLVLRDLTERKTFENQLLYLANY-DALTGLPNRIHLIERLKQAIPLAERNGQHLALLF 467 Query: 91 MNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIW 150 +++ F V D ++ + + +++ + Sbjct: 468 LDLDRFKGVNDS--LGHASGDLLLVEVSKRLSNCVRKG---------------------- 503 Query: 151 YRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDM 210 ++ E + + + +++ Sbjct: 504 --------------------DTVARFGGDEFVFLLEGLEEREDAKPIAEKILGALNAPFE 543 Query: 211 PVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMS--------VRM 262 + + + D +D+ M Y + R Sbjct: 544 IDNVQVFMNGSIGISTWPHDGESSDLLLRRADAAMYRAKELGNSYAFYNPEIGALPERRF 603 Query: 263 RPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQK 322 RE+ A++R +F + +QP +D G E L+RWRHP G I PD FI AES Sbjct: 604 SMERELRRALERNEFELFFQPQIDLATGNCVGAEALIRWRHPEKGLILPDQFIPVAESTG 663 Query: 323 MIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHF 382 +IVP+ + + ++ +N++ ++ + Sbjct: 664 LIVPMGAWVIRSACPHLKSWREAGMAPLRLTVNVSVKQFERGGLIQTLESSMRESGVDSR 723 Query: 383 QIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGF 442 + +E+TE +++ A+ L +G+ I+IDDFGTG+S+L YL++ + LKIDR F Sbjct: 724 LLEIEVTESVLMQHPMASDTLRELSRMGILISIDDFGTGYSSLSYLKKLPVYKLKIDRSF 783 Query: 443 INAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 + + + + A++T+ L + T+AEGVE+ EQ L G + +QGY+ SRPLP Sbjct: 784 VTTLPVDPDMLAITTAIVTMGSALRLKTIAEGVESREQLDILRRLGCDEIQGYYYSRPLP 843 Query: 503 LDDFVRWLKKPYTP 516 D F+ W+++ TP Sbjct: 844 NDTFMTWVREKSTP 857 >UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=C6D7W4_PAESJ Length = 1095 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 101/489 (20%), Positives = 188/489 (38%), Gaps = 59/489 (12%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFV 97 +V ++ +L Y L +R + + + + A A +++ F Sbjct: 493 DVTERKRAEELNAFLA-YHDSLTELPNRRKFEEMLENALETAKTARRHFAVMYLDMDRFK 551 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 + D + ++ I ++ + Sbjct: 552 YINDS--LGHAVGDQLLIAFSKRLQE---------------------------------- 575 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 + T E + I N + + R++ Sbjct: 576 --------QIRETDFAARMGGDEFTVILPHIRDNNSAIEVARRIIERTREPFYIEDYELF 627 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSVRMR------PGREI 268 + + +Y +D + + + S+ ++ +++ Sbjct: 628 ITTSIGISIYPNDGDDSSTLMKNADSALFRAKDLGKNGYQIFTSSMNVQTYKVFTLEKDL 687 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 AI+R++ + YQP V+ + G E L+RW HP G + P+ FI +E +I+ L Sbjct: 688 RKAIQRDELEMYYQPKVNIHTGEIVGAEALIRWNHPEWGLVSPNEFIPISEETGLILSLG 747 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + R E + + IN+ S+ F IQ++L + +EI Sbjct: 748 NWVKRTVCRQNKEWQLAGLKPIPISINVTAKRFLSKDFMDAIQQILAETGLEPHYLEIEI 807 Query: 389 TERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFT--LDYLKIDRGFINA 445 TE +L+ E L+ +GV I++DDFGTG+S+L YL+RF ++ LKIDR FI+ Sbjct: 808 TESSLLENAETVMHTLDSLNKLGVTISLDDFGTGYSSLSYLKRFKHTINILKIDRSFIHD 867 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 + + + ++ A++ LA+ +NM VAEGVET EQ L + +QGY SRP+ + Sbjct: 868 LHQGSDDNAIISAIIQLAQHMNMSVVAEGVETGEQLHILKLLKCDLVQGYLFSRPVQAEA 927 Query: 506 FVRWLKKPY 514 F + LK+ Sbjct: 928 FAQLLKRGS 936 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 94/429 (21%), Positives = 176/429 (41%), Gaps = 24/429 (5%) Query: 112 EMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT- 170 L L + ++ ++ T + + I + N + + L Sbjct: 452 ATHDALTGLPNRYLLRDRIEQVLVHDTRLQRQMAVLFIDLDHFKTINDSLGHEIGDLLLK 511 Query: 171 -------------PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 ++ E + I + + + ++++ L + Sbjct: 512 AVADRLKSCVRNEDTVARQGGDEFIVVLNSIAESLDAAKVAQKILDSFALPFHIHKNELH 571 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMS--------VRMRPGREI 268 + + ++ DD + M G Y + R G ++ Sbjct: 572 IDGSIGIAVFPDDGVNAETLLKNSDVAMYHAKKNGRNNYQFFTDELNKSAYERHILGLDL 631 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A++R + + YQPV+D + + G+E LLRWRHP I PD FIN AE +I+P+ Sbjct: 632 RYALERNELLLYYQPVMDMPSHNLYGVEALLRWRHPEQKLITPDKFINLAEETGLIIPIG 691 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + + ++ + IN++ + +I ++L+ I LEI Sbjct: 692 EWVIRTVCLQIKAWQEQGFYVPRVAINLSARQFRDKDLIKNISRILSETGVKAKHIALEI 751 Query: 389 TERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE ++ E + L ++G+ I+IDDFGTG+S+L YL++F + LKIDR F+ + Sbjct: 752 TESMLIDNIEKVVETLNRLDAMGLHISIDDFGTGYSSLSYLKQFPIHTLKIDRSFVRDLV 811 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 T+ ++ A++ +A L M +AEG+E EQ +L + N QGY+ S+P+ + + Sbjct: 812 TDKNDRTIVAAIIAMAHSLEMEVIAEGIEIEEQLDFLVTQKCNHYQGYYFSKPVTVSEIE 871 Query: 508 RWLKKPYTP 516 L T Sbjct: 872 LMLMNSVTQ 880 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 90/392 (22%), Positives = 163/392 (41%), Gaps = 10/392 (2%) Query: 132 MAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGN 191 +A L + + LL+ L ++ E + Sbjct: 469 VAFLDLDRFKVVNDTLGHGIGDQLLQQVATRLKQCLRNCDTIARWGGDEFTLLFPHLTST 528 Query: 192 TALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVV 250 ++ + R+++ + + + L + L D M Sbjct: 529 DEITKIAHRILDKLSIPFVIDNQELYVTASLGIALCPYDAEDAQTLLKHADAAMYRAKKQ 588 Query: 251 GLLCYYLMSV--------RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWR 302 G + + + ++ ++ A+ +E+F + YQP V+ ++ GLE L+RW+ Sbjct: 589 GRNNFQVFAEEMHREALNQLTLEADLRRALIKEEFLLYYQPQVEISTGKIVGLEALIRWQ 648 Query: 303 HPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLH 362 HP G +PPD FI AE +I P+ Q + + + V+ +N++ H Sbjct: 649 HPTLGFVPPDQFIPLAEEIGLIAPIGQWVLQTACIQHQSWQAEGLPPVRIAVNLSARQFH 708 Query: 363 SESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTG 421 I + L + + LEITE +++ E Q L +G+ I IDDFGTG Sbjct: 709 QSQLINIILQTLETTEIDPQYLELEITESAAMQDVEFTIQTLQELREMGLHITIDDFGTG 768 Query: 422 HSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQA 481 +S+L L+ F L+ LKIDR F+ I + + + ++ L++ L + VAEGVETP+Q Sbjct: 769 YSSLNVLKHFPLNTLKIDRSFVQDIVENSRDAAIAQTIVALSQGLKLKVVAEGVETPQQL 828 Query: 482 RWLSERGVNFMQGYWISRPLPLDDFVRWLKKP 513 +L + QGY+ P+P + + L++ Sbjct: 829 SFLRSIHCDLAQGYYFCPPVPAIEIAKLLRQS 860 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 94/408 (23%), Positives = 170/408 (41%), Gaps = 10/408 (2%) Query: 118 NELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSS 177 L A K V + L + + LL+ +L + ++ Sbjct: 427 AALTRAHRQGKRVALMFLDLDRFKFINDTLGHAVGDKLLQTVASRLTGSLRASDTVARLG 486 Query: 178 RQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVW 237 E + I ++ + +L++ + + + +Y DD + +V Sbjct: 487 GDEFNIVLEDIRDLRGVAQTAQKLIDRVQGMVTLDGHDVYVTASVGIAIYPDDGSTPEVL 546 Query: 238 YAFLLGGMSG---TVVGLLCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQ 288 M ++ + R+R + A+ R++F + +QP VD Sbjct: 547 RMNADTAMYRAKERGKNNFQFFTADMNASTLARLRLESNLHRALARQEFQLHFQPKVDLA 606 Query: 289 ALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPV 348 + G+E LLRWR G + P FI AE +I + + + E R A + + Sbjct: 607 HGHIYGMEALLRWRSHELGPVSPADFIPIAEESNLISTIGEWVLEQACRQARHWLNLGLL 666 Query: 349 GVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQ-EATQLFAWLH 407 +N++ + A ++++L + LEITE + E + L Sbjct: 667 PGTVAVNLSSKQMTQGDIVATVRRILEHSNLPGHYLELEITESVAMDNTGEMIRTLKNLK 726 Query: 408 SVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLN 467 ++GV IAIDDFGTG+S+L YL++ +D LKIDR F+ + + + + A++++ + LN Sbjct: 727 ALGVRIAIDDFGTGYSSLSYLKQLPIDVLKIDRSFVTDLHEDRDDAAIASAIISMGQSLN 786 Query: 468 MLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYT 515 + VAEGVE E ++L + G + QGY SRP+P + L + Sbjct: 787 LQPVAEGVEREEHRQFLLDHGCQYGQGYLFSRPVPAATMEQLLLESQA 834 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 504 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 107/486 (22%), Positives = 194/486 (39%), Gaps = 57/486 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDRL--QPLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ + ++L F L +R Q Q A + A +++ F Sbjct: 492 DLSERKAADERIQFLAH-FDVLTGLPNRAHIQDRVELAIQNATRDNERLALLLLDLDRFK 550 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 + + SA + L E I + + V Sbjct: 551 TINES--LGHSAGDALLQVLAERIRSTLLTGEV--------------------------- 581 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 + E + LI + + + R+ V E + Sbjct: 582 ---------------VARQGGDEFIVLLPLIADPGSAALAAERIREVLEPPVELFNHSIS 626 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMS-----GTVVGLLCYYLMSVR----MRPGREI 268 + + ++ DD + M G ++ R + ++ Sbjct: 627 ITPSIGISVFPDDGRDFETLVRNADAAMYHAKSAGRNSYKFYTADLNARAREILEIESQL 686 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A+ R++F + YQP VD + + G E L+RW+HP G + P FI AE + IV + Sbjct: 687 RYALDRDEFVLHYQPQVDLKTGEIIGAEALIRWQHPELGLLGPVRFIEVAEERGFIVQIG 746 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + R A+ + + +N++ + +Q+ L++ + +E+ Sbjct: 747 NWVIQEACRQLAQWRRQGLPRISLAVNLSTLQFRQQDLAVHLQRALSAHGLVGSDLDVEV 806 Query: 389 TERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE ++ + E + S+G++++IDDFGTG+S+L YL+RF D LKIDR F+ I Sbjct: 807 TESVIMDDVETTIHTIDRIKSMGLQLSIDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIP 866 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + S + A++ +AK LNM +AEGVET EQ ++L G + QGY +++P+P +F Sbjct: 867 MDADDSAIARAIINMAKNLNMTVIAEGVETIEQWKFLDREGCHAAQGYLLAKPVPAKEFE 926 Query: 508 RWLKKP 513 R L+K Sbjct: 927 RLLEKG 932 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 504 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 98/490 (20%), Positives = 177/490 (36%), Gaps = 58/490 (11%) Query: 38 KHEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRT 95 ++ L + L F L +R Q A A +++ Sbjct: 594 TRDITEKKLAEAQIQQLAH-FDQLTGLPNRSQLHDRFRYALSLAQRHGDQLAIMFLDL-- 650 Query: 96 FVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPL 155 + + L Sbjct: 651 ------------------------------------------DHFKNINDTLGHSVGDQL 668 Query: 156 LKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRET 215 L + L SL E + S +++L+ + Sbjct: 669 LVDVSRRLKAALREEDSLSRLGGDEFILLLPG-TDEAQASQVATKLLAAVAQPCQIEQNE 727 Query: 216 KIAGIPLTVRLYADDWTWNDVWYAFLLGGMS---GTVVGLLCYYLMSVR------MRPGR 266 ++ + + + LY +D + M ++ ++ ++ Sbjct: 728 LVSTVSIGIALYPNDGQDFETLSKNADAAMYRVKQASRNDFRFFTQEMQTHSARTLQLVN 787 Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 + A+ R +F + +QP V Q + G E LLRWRHP G I P FI AE I+ Sbjct: 788 ALRHALPRHEFELHFQPQVALQDGHIVGAEALLRWRHPELGMISPAEFIPIAEDSGQILA 847 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 + + + R + + +N++ + A + ++L + L Sbjct: 848 IGEWVLRTAVRQLKQWLDAGLRPMVIAVNLSAVQFRHPNLMALVTRILDEAALPPEFLEL 907 Query: 387 EITE-RDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 E+TE M A + L G+ ++IDDFGTG+S+L YL++F ++ LKID+ F+ Sbjct: 908 ELTEAAAMDDPPAAIAIMNKLDEHGIRMSIDDFGTGYSSLSYLKKFKVNKLKIDQSFVRD 967 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 I + ++ A++ LA L M T+AEGVET Q +L +G + +QGY++S+PLP D Sbjct: 968 ISDDPDDKAIVTAIINLASSLGMHTIAEGVETASQLAFLRLQGCDEVQGYYVSKPLPKDQ 1027 Query: 506 FVRWLKKPYT 515 F +++ + Sbjct: 1028 FEAFVRNSIS 1037 >UniRef50_A1AMG1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AMG1_PELPD Length = 718 Score = 504 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 108/490 (22%), Positives = 187/490 (38%), Gaps = 45/490 (9%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDRLQPL--TLDTCQQANPELTARAAFSMNVRTF 96 ++ L + +YL Y+ L +R+ + A +++ F Sbjct: 251 QDITSRKLAEEKIRYLA-YYDSLTGLPNRVLFKEHLRRALATSEQHKRQLAIMLLDLDRF 309 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 + D A + + + + L + ++ Sbjct: 310 KGINDS--LGHDAGDLLLQQVADRL-RLRVRPYDTVSR---------------------- 344 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 + E + I A + + R++ E Sbjct: 345 -------DSEEQRDSLIARLGGDEFTILLEGITTPEAAARVARRVIEALEAPFALNGNEV 397 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSV------RMRPGRE 267 + + +Y D T ++ M +Y + R+ Sbjct: 398 FISCSIGISIYPHDGTDLEILVKNADVAMYCAKDLGCSTFQFYTQEMNSVSLQRLILETH 457 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A ++E+F++ YQP +D R+ GLE L RW +P G + P +FI AE +I+ L Sbjct: 458 LRKAFEKEEFFLHYQPQIDCVTNRIIGLEALARWNNPELGLVSPGSFIPLAEETGLIIAL 517 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + + + + + V+ +N++ H + IQ++ + A + LE Sbjct: 518 DRWVLATVCKQLEAWQAAGIPLVRVAVNLSARHFLKANLNKTIQQIRSRGAAARDHLDLE 577 Query: 388 ITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 ITE +++ +E + L GV I+IDDFGTG+S+L YL R LKIDR FI+ Sbjct: 578 ITEGMLMENAEEVVSVLGMLQETGVNISIDDFGTGYSSLSYLTRLPFHTLKIDRSFISQS 637 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 G ++ V+ A++ LA L VAEGVET Q ++L E G +QGY SRPLP D Sbjct: 638 GDNVESASVVTAIIALAHSLGKEVVAEGVETSTQLQFLKENGCRVIQGYLFSRPLPEDKI 697 Query: 507 VRWLKKPYTP 516 L++ P Sbjct: 698 RELLREGRIP 707 >UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation kinase n=2 Tax=Bacillaceae RepID=A3IAQ2_9BACI Length = 934 Score = 503 bits (1297), Expect = e-141, Method: Composition-based stats. Identities = 98/481 (20%), Positives = 189/481 (39%), Gaps = 58/481 (12%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ + + KY YF L +R L + A A +++ F Sbjct: 496 DITQRKQLEEKIKY-HAYFDSLTDLPNRVLLIDRLTQGLKYAKVNGEKLAVLYLDLDRFK 554 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 LV D S + + + + A + ++ ++ G Sbjct: 555 LVNDS--LGHSYGDLLLQSVAKRLSAC-VPEDATVSRQGG-------------------- 591 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 E + I + + + + Sbjct: 592 ---------------------DEFTIYLPNIKCENDILKVINCINASFSQPFNLIDNEIY 630 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV-----VGLLCYYLMSVR----MRPGREI 268 + + L+ + + M + M R ++ ++ Sbjct: 631 IKTSIGISLFPKNGDTTETLIKNADTAMYKSKETPGTSYHFFSEGMDTRTFESIKLENDL 690 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A++R++ + YQP ++ + ++ G+E LLRW H G I PD FI AE +IVP+ Sbjct: 691 YKALERDELIIFYQPQINYKTNKIKGVEALLRWNHREHGMITPDRFIPLAEETGLIVPIG 750 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + + + E + +N++ + + I+ +L + LE+ Sbjct: 751 EWVLKEACKQLKEWHNQGYPLISMSVNLSVHQFEQNNLFSIIENVLYETDLSPEYLQLEL 810 Query: 389 TERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE ++K E T + L+ +GV +AIDDFGTG+S+L YL+ + LKID+ F+ + Sbjct: 811 TENLIVKNTEVTLKTMTQLNGLGVNLAIDDFGTGYSSLGYLKNLPISTLKIDKSFVQEML 870 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 T+ + + + ++TLA+ L + +AEGVET EQA +L E+ + MQGY+ S+P+ + + Sbjct: 871 TD-DAAAITNTIITLAQNLKLEVIAEGVETKEQADYLLEQNCHLMQGYFFSKPMKAGEIM 929 Query: 508 R 508 + Sbjct: 930 K 930 >UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L753_EXISA Length = 819 Score = 503 bits (1297), Expect = e-141, Method: Composition-based stats. Identities = 97/483 (20%), Positives = 174/483 (36%), Gaps = 55/483 (11%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVL 98 ++ I L Y L +R + A + +++ F + Sbjct: 376 RDISERKRIEAQINDL-VYLDPLTGLPNRRLFSDRLDALLGQSQSEQFALYYIDLDNFKV 434 Query: 99 VKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKN 158 + D+ F S + + I + Sbjct: 435 INDR--FGHSIGDQFLKQVTTRIQST---------------------------------- 458 Query: 159 SGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIA 218 + T +L E ++ + + + L+NV E Sbjct: 459 --------IQKTDTLARLGGDEF-IILSPDTKSNLAAHRAQELINVLHPPFELENEEVFT 509 Query: 219 GIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYL------MSVRMRPGREIM 269 G + + L+ D + M ++ +S R + Sbjct: 510 GASIGISLHPSDGDTAEELIKNADIAMYRAKADGKNGYQFFTNELNESVSRRSNLSMALR 569 Query: 270 TAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQ 329 I R +F V YQP + + V G+E L+RW HP G I P FI AE I L + Sbjct: 570 KGIGRGEFTVHYQPQIQLETEMVIGMEALVRWNHPELGMISPGEFIPIAEETGSIHRLGE 629 Query: 330 HLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEIT 389 + R + + +NI+ + + + L + + LE+T Sbjct: 630 FVLNEACRQNKAWQDASIPPFRVAVNISAVQFAQKDLPEVVSRALAASGLEAQYLELELT 689 Query: 390 ERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTE 449 E + A + L ++GV ++IDDFGTG+S+L YL+ F +D LKID+ F I ++ Sbjct: 690 ESVIQSADRAIETMHELVALGVHLSIDDFGTGYSSLSYLKLFPIDTLKIDQHFTKNIESD 749 Query: 450 TITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRW 509 + ++ ++ +A L++ +AEGVET Q +L N QGY+ +RPLP ++ + Sbjct: 750 EKDAALVKTIIRMAHELDLNVIAEGVETENQVAFLKAESCNQAQGYFYNRPLPAEEIEVF 809 Query: 510 LKK 512 ++ Sbjct: 810 FQQ 812 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 503 bits (1297), Expect = e-141, Method: Composition-based stats. Identities = 82/407 (20%), Positives = 164/407 (40%), Gaps = 11/407 (2%) Query: 118 NELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSS 177 ++L A + + + + ++ + LL + ++ Sbjct: 994 HDLARAHRGREALALMFVDLDRFKNVNDSLGHRVGDALLIQVAERLRRAVRDEDTVSRLG 1053 Query: 178 RQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVW 237 E + + +++L+ V + + + +Y D + Sbjct: 1054 GDEFIVVLP-STDADGAAHVAAKLLEVMAPAYRIEQHELTCSLSAGIAMYPADGESFEAL 1112 Query: 238 YAFLLGGMSGTV---VGLLCYYLMSVR------MRPGREIMTAIKREQFYVAYQPVVDTQ 288 M C++ ++ ++ ++ A++ + + YQP Sbjct: 1113 SMSADTAMYRAKQSGRNAYCFFTAEMQERSARNLQIENDLRRALENGELRLHYQPQFTLA 1172 Query: 289 ALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPV 348 R+ G E LLRW+HP G + P FI AE +I+P+ + + ++ Sbjct: 1173 DRRLVGAEALLRWQHPQLGMVSPVEFIPIAEECGLILPIGEWVLRAAVSQLRVWQQEGLP 1232 Query: 349 GVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQ-EATQLFAWLH 407 + +N++ S + ++L + + LE+TE + A L Sbjct: 1233 PMTVAVNLSAVQFRQASLTDVVSRILDAEGLAAQFLELELTESVAMDNPLAAIATMDKLR 1292 Query: 408 SVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLN 467 ++GV ++IDDFGTG+S++ YL+RF + LKIDR F+ + + ++ A ++LA+ L Sbjct: 1293 ALGVRMSIDDFGTGYSSMSYLKRFRVHKLKIDRSFVADLAADPEDEAIVTATISLARDLG 1352 Query: 468 MLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPY 514 + T+AEGVE+ Q +L +G + QGY SRPL F +++ Sbjct: 1353 LQTIAEGVESEAQLAFLRAKGCDEAQGYLFSRPLAPAQFAAFVRAHA 1399 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 503 bits (1296), Expect = e-141, Method: Composition-based stats. Identities = 90/429 (20%), Positives = 167/429 (38%), Gaps = 24/429 (5%) Query: 112 EMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT- 170 L L + ++ A+ ++ N + N + L Sbjct: 437 ATHDTLTGLPNRSLLEDRLNQAVAGARRRGQMVALLMFDLDNFKVVNDTLGHTAGDQLLR 496 Query: 171 -------------PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 + E + + T + N+ + Sbjct: 497 SVAARIRSFVRNCDTFARLGGDEFVIVLTNLTRMDDAVTVAESFRNLLAMPFFLGGREIF 556 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSG---TVVGLLCYYL------MSVRMRPGREI 268 + + L+ DD + M + ++ ++ R+ + Sbjct: 557 ITASMGISLFPDDGDTMEALIKKADTAMYHIKESGRNSFQFFAEEMNQKVNARLTIETGL 616 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A+++ + + YQP ++ V G+E L+RW P G I P FI AE +IV + Sbjct: 617 RRALEKGEMLLHYQPRLEPGTGAVVGMEALVRWNSPDMGLISPADFIPIAEDSGLIVEIG 676 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + A E ++ ++ +NI+ F + +++ + LE+ Sbjct: 677 DWVLATACCQALEWHRMGHDSLRVSVNISARQFVGHDFVDRVVRIIEQSGLSPHFVELEL 736 Query: 389 TERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE + E ++ L G+ I+IDDFGTG+S+L YL+RF +D LKID+ FI+ + Sbjct: 737 TETALTHNVDETVKIMNRLRERGITISIDDFGTGYSSLNYLKRFPVDVLKIDKSFIDDMV 796 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + ++ ++ +A ++M VAEGVET EQ + L E +QG++ SRPLP ++F Sbjct: 797 KRREDAAIVATIIGIAHHMHMKVVAEGVETAEQMKLLMEGNCEEIQGFYFSRPLPPEEFE 856 Query: 508 RWLKKPYTP 516 R++ P Sbjct: 857 RYIAGRTVP 865 >UniRef50_Q9I310 Uncharacterized signaling protein PA1727 n=74 Tax=Proteobacteria RepID=Y1727_PSEAE Length = 685 Score = 503 bits (1296), Expect = e-141, Method: Composition-based stats. Identities = 109/519 (21%), Positives = 193/519 (37%), Gaps = 59/519 (11%) Query: 4 RAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTY--FADL 61 R + G +L ++ +IAI + T + + L +L Sbjct: 209 RGIDNGWLAVLVIVITLAVIAIALIVSVLDSRLEARTSVLATSLARANRELIQLALHDNL 268 Query: 62 KSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNE 119 +R+ QQA + A M++ F V D + + I + E Sbjct: 269 TKLPNRMLLDDRLEQAIQQAIRDDRRFAVLFMDLDGFKAVND--AYGHHLGDLLLIEVAE 326 Query: 120 LIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQ 179 I A N+ ++ Sbjct: 327 RIRA------------------------------------------NVRAQDTIARLGGD 344 Query: 180 EDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYA 239 E + +T + +L+ R + + LY D Sbjct: 345 EFVLLIEARE-PADAATLAEKLVKRISQPYQISRHEVRISASIGIALYPGDGQTRHELMI 403 Query: 240 FLLGGMSGTV---VGLLCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQAL 290 M C++ S+ +++ ++ A++R Q + YQP V Sbjct: 404 NADAAMYHAKDQGRNGYCFFESSMNANAQEQLQLLHDLRQALERRQLVLHYQPKVLAPNG 463 Query: 291 RVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGV 350 + G+E LLRW HP G I P F+ AE +IV + + + + R Sbjct: 464 PMIGVEALLRWEHPQHGLITPGQFLPLAEKTGLIVQIGEWVLDEACRQMRLWLDGGHADW 523 Query: 351 KFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEA-TQLFAWLHSV 409 +N++ ++ L ++LE+TE +++ +A + L ++ Sbjct: 524 NIAVNLSALQFAHAGLVDSVRNALLRHSLEPSHLILEVTESTAMRDADASLVILEQLSAM 583 Query: 410 GVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNML 469 GV I+IDDFGTG+S+L+YL+R LKIDRGFIN + ++ + ++ A++ L + LN+ Sbjct: 584 GVGISIDDFGTGYSSLLYLKRLPASELKIDRGFINELAHDSDDAAIVSAIVALGRTLNLK 643 Query: 470 TVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVR 508 VAEGVET Q +L+ G N +QG+ + RP+P + + Sbjct: 644 IVAEGVETEAQQEFLTRLGCNSLQGFLLGRPMPAEQLLA 682 >UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC Length = 1499 Score = 503 bits (1295), Expect = e-141, Method: Composition-based stats. Identities = 91/405 (22%), Positives = 153/405 (37%), Gaps = 10/405 (2%) Query: 114 DIPLNELIPALDINKNVD-MAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPS 172 L EL+ + + L + + LLK + L Sbjct: 1069 HKQLGELMNRSHLRGEQFAVLFLDLDRFKLVNDTLGHEVGDLLLKAAADRIVGCLRSNDM 1128 Query: 173 LFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWT 232 + E + I + ++++ +V + + + LY D Sbjct: 1129 VARLGGDEFTVILEKIESPRVAAEVAAKICSVLSKVFAFSGQEMYISTSIGISLYPGDGE 1188 Query: 233 WNDVWYAFLLGGMSGTVVGLLCYYLMSV--------RMRPGREIMTAIKREQFYVAYQPV 284 M Y R+ E+ A+++ + + YQP Sbjct: 1189 DVSTLVKHADTAMFRAKEQGNSYQFYEKGMETAAVKRLGLEAELRRALEQNELALYYQPQ 1248 Query: 285 VDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEK 344 ++ + LE L+RW HP G IPP FI AE +I + + + Sbjct: 1249 INLGTGEIATLETLIRWHHPEHGLIPPSEFIPLAEETGLIASIGAWILREACTQMQSWLQ 1308 Query: 345 VLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQ-EATQLF 403 +N++ L E I +L + LEITE ++K A F Sbjct: 1309 RGFGPFHIAVNVSGRELEREDLVDKIVTILKETGLPPKWLELEITESVVMKGAGAAIPKF 1368 Query: 404 AWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLA 463 L +G++ AIDDFGTG+S+L YL+ F +D LKIDR FI+ + + + ++ ++ LA Sbjct: 1369 RRLREMGIKFAIDDFGTGYSSLNYLKSFPVDILKIDRCFIHDVVSNPDDAAIIKGIIALA 1428 Query: 464 KRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVR 508 L + VAEGVET Q +L + QG+++S PL + + Sbjct: 1429 HSLRLKVVAEGVETQAQEEFLKAHQCDRFQGFYLSEPLSAAEIEQ 1473 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 503 bits (1295), Expect = e-141, Method: Composition-based stats. Identities = 101/419 (24%), Positives = 180/419 (42%), Gaps = 24/419 (5%) Query: 116 PLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT----- 170 P+ L + A+ T + + N + + L Sbjct: 443 PVTGLPNRTLFKDRLQHALANATRNQRLVALLFLDMDQFKNVNDSLGHMMGDELLRQTAE 502 Query: 171 ---------PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIP 221 ++ E + I + S + R++ + Sbjct: 503 RLLGCVREGDTVARFGGDEFIILLENIEHSEQASLSAERVVQAMRRPFRLGEHEHFCNVS 562 Query: 222 LTVRLYADDWTWNDVWYAFLLGGMS---GTVVGLLCYYLMSV------RMRPGREIMTAI 272 + + LY +D + M +Y + R+ ++ A+ Sbjct: 563 IGISLYPEDDEHPEDLVRHADSAMYLAKAQGGAGYRFYTPDMNTRAMERLLLQNQLHQAL 622 Query: 273 KREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLF 332 + QF V YQP +D ++ R+ G+E L+RW+HP G +PP FI AE +I PL + + Sbjct: 623 ELGQFQVHYQPQMDLRSGRICGVEALVRWQHPERGLVPPAEFIPMAEDTGLIEPLGEWVL 682 Query: 333 ELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERD 392 AR+ + + +N++P ++++L ++ LEITER Sbjct: 683 RTAAREVRGWQDRGLPALNLSVNLSPRQFRHPDLPGMVERVLAESGLEAERLELEITERL 742 Query: 393 MLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETI 451 ++ + E + + +GV ++IDDFGTGHS+L YL+R + LKIDR F++ IG ++ Sbjct: 743 IIVDLEHTVDTLSRIARLGVRVSIDDFGTGHSSLAYLKRLPVHALKIDREFVDGIGQDSD 802 Query: 452 TSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 + + +AV+ L + L + +AEGVET EQA +L E G + +QG++I+RP+P + WL Sbjct: 803 DAAIAEAVIALGRTLRLQVIAEGVETREQASFLREHGCDAVQGFFIARPMPAGELTGWL 861 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 503 bits (1295), Expect = e-141, Method: Composition-based stats. Identities = 99/418 (23%), Positives = 171/418 (40%), Gaps = 24/418 (5%) Query: 117 LNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNL--------- 167 L L + ++++A+ I++ + N + + Sbjct: 817 LTGLANRTLLYDHLEIALHQSQRSKKLVAVILLDLDRFKVINDSLGHLVGDQVLKAVGQR 876 Query: 168 -----NLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPL 222 T ++ E + + TA + L+ Sbjct: 877 LKQYVRSTDTVARLGGDEFVVLLTDVRDTTAAGKIAHNLLRKLNEPFFLHGRELYVSASF 936 Query: 223 TVRLYADDWTWNDVWYAFLLGGMSGTVV--GLLCYYLMSVR------MRPGREIMTAIKR 274 + L D + M L +Y + + + A+++ Sbjct: 937 GICLSETDNVDGTILLRNADIAMYKAKAEGCGLYFYSHEMNEHLIKTLEMENSLRQALEK 996 Query: 275 EQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFEL 334 +F + YQP V+ R+ G E LLRWRHP G IPP FI AE +IV + + Sbjct: 997 NEFQLYYQPKVEHATGRIIGCEALLRWRHPQRGMIPPSEFIPLAEETGLIVQIGHWVLAE 1056 Query: 335 IARDAAELEKVLPVGVKFGINIAPDHLHSE-SFKADIQKLLTSLPAHHFQIVLEITERDM 393 R + E + +NI+ + + ++ L Q+ LE+TE + Sbjct: 1057 ACRQSKIWETEGLPPLTMAVNISARQFYQGENLIQAVKSTLERSQLVPSQLELELTESMV 1116 Query: 394 LKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETIT 452 +K+ A + + +GV +++DDFGTG+S+L YL F +D LKIDR FI I ++ + Sbjct: 1117 MKDAVNAERTMRKIKQLGVSLSLDDFGTGYSSLNYLRSFPVDSLKIDRSFILDIASDASS 1176 Query: 453 SPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 + +L++++ +A L + TVAEGVE +Q ++ G N++QGY SRPLP +DFV Sbjct: 1177 AAILNSIIAIAHTLGLQTVAEGVENNDQLALVANCGCNYIQGYLFSRPLPPEDFVALF 1234 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 502 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 108/441 (24%), Positives = 183/441 (41%), Gaps = 25/441 (5%) Query: 96 FVLVKDKKTFCSSA-TGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNP 154 F V D+K + ++ L L + ++ AI T +++ Sbjct: 447 FNDVTDRKRYEAALEYQANHDDLTGLPNRNLLRDRLEHAITKATREHTKLAVLLLDLDQF 506 Query: 155 LLKNSGVFAALNLNLT--------------PSLFYSSRQEDYDGVALIIGNTALSTFSSR 200 N G+ + L ++ E I A +T + + Sbjct: 507 KRVNDGLGHKIGDTLIQRVASRMSQCVRDSDTVARLGGDEFMILSTDIRDERAAATLAQK 566 Query: 201 LMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYL 257 L+ IA + + ++ D D + M +Y Sbjct: 567 LLRQFRQKVAINGHEIIASASIGIAMFPKDGDNGDELFRNADTAMYRAKDVGRNGFQFYS 626 Query: 258 ------MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPP 311 M R+ + + AI Q + YQP +D + V E L+RWRHP G I P Sbjct: 627 AEMNNRMRERLYLEQSLRNAIGLHQLSLWYQPKLDLASGSVKSAEALIRWRHPQLGMISP 686 Query: 312 DAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQ 371 FI AE +I+P+ + E +R A+ ++ INI+ L + Sbjct: 687 GDFIPIAEETGLILPIGAWVIEEASRQLAKWRDQENQDIRVAINISAYQLSHGKLTDQVI 746 Query: 372 KLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLER 430 + L SL + +E+TE ++ + + A L +G+ +A+DDFGTG+S+L YL+R Sbjct: 747 QALDSLGLDPQSLTIEVTETAIMPQMDKAVCELQSLREMGIRVALDDFGTGYSSLTYLKR 806 Query: 431 FTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVN 490 F +D LKIDR F++ I + + ++ ++ LA LNM VAEGVET Q +L G + Sbjct: 807 FPIDILKIDRSFVSDIADDEESGAIVKTIINLAHNLNMTVVAEGVETEAQLEFLRTNGCD 866 Query: 491 FMQGYWISRPLPLDDFVRWLK 511 +QGY+ +PLP ++ + +L+ Sbjct: 867 EVQGYYFCKPLPSEECLEFLR 887 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 502 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 100/488 (20%), Positives = 177/488 (36%), Gaps = 57/488 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ L K+L Y L ++R LQ T A E A Sbjct: 769 DITERKLAEAQIKHLA-YHDPLTGLSNRFSLQTQLDQTLALARREQRTLAV--------- 818 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 L ++ + LL Sbjct: 819 -----------------------------------VFLDLDRFKSINDSLGHALGDQLLV 843 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 N+ + + E + + + + +L+ Sbjct: 844 EVARRLRDNVRDSDIVARLGGDEFVVVLTEVGDAAGAARVADKLLGALVPRYRIGGHALH 903 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSV------RMRPGREI 268 + + LY D D M + ++ + R++ ++ Sbjct: 904 TTASIGISLYPHDGDDADALMKNADTAMYHAKSQGRDNVQFFTPEMNQSVLKRLQFDHDL 963 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A++ QF + YQP +++ + RV +E L+RW+HP G + P FI AE +I+PL Sbjct: 964 RVAVEAGQFELHYQPQINSTSGRVVKVEALVRWQHPREGLVSPAEFIPIAEETGLILPLG 1023 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + R + +N++ LHS + + + L + + LEI Sbjct: 1024 EWVLNEACRQLRLWRDAGITDLTVAVNLSAHQLHSPALIPMVARTLGNHGLEGADLCLEI 1083 Query: 389 TERDMLKEQEA-TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE +++ A L +G+ ++IDDFGTG+S+L YL+ +D LK+D+ F+ I Sbjct: 1084 TESVAMRDTTASIAQLQALRDLGIHLSIDDFGTGYSSLSYLKLLPIDTLKLDQSFVCEIE 1143 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + A + LA L + VAEG+ET Q R L+ +FMQGY S PLP + + Sbjct: 1144 FNPSDVAICAATIALAHSLGLEVVAEGIETETQRRLLASHRCDFMQGYLFSAPLPAERAL 1203 Query: 508 RWLKKPYT 515 ++++ Sbjct: 1204 AYIREQQA 1211 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 502 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 94/425 (22%), Positives = 173/425 (40%), Gaps = 25/425 (5%) Query: 117 LNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT------ 170 L L N+ + +A+ + + N + + L Sbjct: 275 LTGLPNRHLFNELMHLALAQAHRHNRLLAVLFLDLDRFKHINDTLGHTVGDQLLQASAHR 334 Query: 171 ---------PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIP 221 ++ E + I + ++++ + Sbjct: 335 LKECCRRDRDTVARRGGDEFIILLPDIDDVQEAVRVAQKIIDAFTQVFVLPDIELFISTC 394 Query: 222 LTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMS--------VRMRPGREIMTAI 272 + + ++ +D + M G Y+L + R+ + A+ Sbjct: 395 IGISIFPNDGRDTETLIKNADMAMYRAKEQGRSRYHLYTSSMDEQAFRRLTMENSLRKAL 454 Query: 273 KREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLF 332 +RE+F + YQP V+ + ++ LE L+RW++P G I P+ FI AE +I+PL + + Sbjct: 455 QREEFSLYYQPKVNIKTGQIVCLEALVRWQNPEMGLILPNQFIPLAEDTGLIIPLGEWVL 514 Query: 333 ELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERD 392 + + ++ +N +P ++++L + LE+TE Sbjct: 515 RTACAQNKTWQLLNYPPMRVAVNFSPRQFQQPRLTDMVEQILGEADLAPCWLELELTENV 574 Query: 393 MLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETI 451 ML+ E Q L ++G+ I+IDDFGTG+S+L Y+++ + LKIDR F++ I T Sbjct: 575 MLQNVEKTVQTLNRLSNLGIHISIDDFGTGYSSLSYIKKLPIQTLKIDRSFVHDINTNAD 634 Query: 452 TSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 + + AV+T+A+ L + +AEGVET EQ + L MQGY S+PLP+ + L Sbjct: 635 DAAIAIAVITMAQSLRLNVIAEGVETLEQMKLLDGLNCPEMQGYLFSKPLPVAEMTTLLS 694 Query: 512 KPYTP 516 P Sbjct: 695 NIKWP 699 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 105/487 (21%), Positives = 182/487 (37%), Gaps = 58/487 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDRLQP--LTLDTCQQANPELTARAAFSMNVRTFV 97 ++ + ++L F L +R + A A +++ Sbjct: 604 DLTERKETEERVQWLAH-FDPLTGLPNRTLLHIRSNLAISLAQRRHEPLALMFLDLDN-- 660 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 ++ + LLK Sbjct: 661 ------------------------------------------FKNVNDSLGHGVGDELLK 678 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 + ++ E + + + RL+N+ R Sbjct: 679 QFSQRLVNAVREQDTISRLGGDEFVLVLPG-TDTDGAAYLAERLLNIAARQYNIERHEIN 737 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSVR------MRPGREI 268 + + + +Y D T D + M C++ ++ ++ + Sbjct: 738 LTVSIGIAMYPTDGTDFDTLWRSADAAMYRAKQSGRNDYCFFTTEMQARSARTLQIDNAL 797 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A++R QF + YQP + R+ G E L+RW HP G PPD FI AES I+P+ Sbjct: 798 RRALERNQFSLVYQPQLSLNTNRIVGFEALIRWTHPQFGNTPPDEFIPIAESNGQIIPIG 857 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + + R + V +N++ + +L + LE+ Sbjct: 858 EWVLKTAVRQLRLWQDNGLKDVTISVNLSAVQFRHPRLPELVMAILEEAGVSPECLQLEL 917 Query: 389 TERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE ++ A + L G+ I+IDDFGTG+S+L YL+RF + LKIDR F+ + Sbjct: 918 TEGVAMENPLAAITVIDELRKKGIRISIDDFGTGYSSLTYLKRFNVYSLKIDRSFVQDLP 977 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 +T ++ AV++LA L M+TVAEGVET EQ +L RG +QGY++SRPL D Sbjct: 978 NDTEDMAIVSAVISLADSLGMITVAEGVETKEQLEFLRSRGCTEIQGYYLSRPLQADAVF 1037 Query: 508 RWLKKPY 514 +++ + Sbjct: 1038 SFIEDDH 1044 >UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase sensor n=1 Tax=Thauera sp. MZ1T RepID=C4KA21_THASP Length = 1093 Score = 501 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 115/490 (23%), Positives = 188/490 (38%), Gaps = 57/490 (11%) Query: 38 KHEVKYDTLITDVQKYLDTYFADLKSTTDRL--QPLTLDTCQQANPELTARAAFSMNVRT 95 +V +YL F L +R Q D + A A +++ Sbjct: 646 AQDVTALREAEARIRYLAR-FDPLTGLLNRSAWQDHAQDVLRHAARHDDRCAVLFLDLDD 704 Query: 96 FVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPL 155 F V D +A + + + +++ Sbjct: 705 FKTVNDS--LGHAAGDRLLAQVACRLGGCVRAEDL------------------------- 737 Query: 156 LKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRET 215 + E ++ + + + R+++ + Sbjct: 738 -----------------VARIGGDEFVILLSRLAHAEEPARVAERVLDALARPLQIDSQP 780 Query: 216 KIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLM--------SVRMRPGR 266 G + + LY D D M G Y + R++ Sbjct: 781 LRVGASIGIALYPADGGEIDTLLKHADTAMYEAKESGRNAYRFFLPEMTQRVTRRLQTEA 840 Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 E+ AI+ + YQP +D + RV G E L+RW+HP G +PPD F+ FAE +IVP Sbjct: 841 ELRKAIESGDLRLHYQPQIDAASGRVYGCEALVRWQHPERGLLPPDRFVPFAEQSGLIVP 900 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 L + + + +NI+ F A + ++L A +I L Sbjct: 901 LGEWVLREACLQQVRWRDAGLPPLDVAVNISALQFRRRDFVATVARVLGETGADPARIEL 960 Query: 387 EITERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 EITE ++ E F L ++G+ +A+DDFGTG+S+L YL+R L LKIDR F++ Sbjct: 961 EITESALMDATPELVASFDQLVALGLTLALDDFGTGYSSLSYLKRLPLRRLKIDRSFVDG 1020 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 + + + A L+LA+ L M VAEGVET +Q +L +RG MQGY SRPL +++ Sbjct: 1021 LPDNPEDAAITSATLSLARDLGMEVVAEGVETEDQRGYLCKRGCRAMQGYLFSRPLGVEE 1080 Query: 506 FVRWLKKPYT 515 F W ++ Sbjct: 1081 FGTWFEEQAA 1090 >UniRef50_C6E011 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=C6E011_GEOSM Length = 869 Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats. Identities = 96/424 (22%), Positives = 165/424 (38%), Gaps = 24/424 (5%) Query: 117 LNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT------ 170 + +L + + A+ I I N + + L Sbjct: 441 VTKLPNRFSLMARLGQALELAKRFSSRLAVIFIDLDRFKNINDSLGHHIGDRLLFQVAGR 500 Query: 171 --------PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPL 222 + E + LI N + + ++ + Sbjct: 501 LQDTIRSADIVARLGGDEFVVVLPLINSNISAAHAVRKIQQTLSQGYTVESHELNITPSI 560 Query: 223 TVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSV------RMRPGREIMTAIK 273 + +Y D M ++ + R+ ++ TA++ Sbjct: 561 GISVYPTDGETVQELMKNADLAMYHAKSAGRNSYQFFTQEMNLTVQARLVLESDLRTALE 620 Query: 274 REQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFE 333 R++ + YQP +D ++ V G+E LLRWRHPV G + PD FI AE +I+ + + + Sbjct: 621 RDEMMLHYQPQIDLKSGEVVGVEALLRWRHPVRGAVAPDVFIPVAEDTGLILSIGEFALK 680 Query: 334 LIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDM 393 A ++ +N++ + + + +L + + LEITE Sbjct: 681 SACEQLALWISQGLSPLRMAVNLSARQFKQSNLPSLLADILAATGVAAHLLELEITESSA 740 Query: 394 LKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETIT 452 + + A L +GVE+AIDDFGTG+S+L YL+ F ++ LKIDR F+ I T++ Sbjct: 741 MDDPNTAIVHLRTLREMGVELAIDDFGTGYSSLSYLKLFPVNRLKIDRSFVRGIDTDSED 800 Query: 453 SPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 + + A + LA L VAEGVET Q R+L + + +QGY+ S PL +L Sbjct: 801 AEIAAATIALAHNLGKEVVAEGVETEAQCRFLRGQQCDILQGYFFSEPLSAAGIASYLAA 860 Query: 513 PYTP 516 P Sbjct: 861 NRRP 864 >UniRef50_B5ED91 Diguanylate cyclase/phosphodiesterase n=3 Tax=Geobacter RepID=B5ED91_GEOBB Length = 742 Score = 501 bits (1290), Expect = e-140, Method: Composition-based stats. Identities = 115/494 (23%), Positives = 197/494 (39%), Gaps = 58/494 (11%) Query: 34 VAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSM 91 VA +V + + L Y+ L +R L A E A M Sbjct: 279 VATLLEDVTEKKRTAEQLERLA-YYDSLTGLLNRRMLLDRMEQAIGTAQREGVKVATLFM 337 Query: 92 NVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWY 151 ++ F ++ D T A ++ + + + + + Sbjct: 338 DLNGFKVIND--TLGHKAGDQILVEVAKRLQKMVRK------------------------ 371 Query: 152 RNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMP 211 +L E S + L+N Sbjct: 372 ------------------RDTLARLGGDEFVVAATFEKDE-NASAIAKNLINAITPVYQV 412 Query: 212 VRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS---GTVVGLLCYYLM------SVRM 262 G+ + + ++ DD + M G C+Y RM Sbjct: 413 CDREVYVGVSVGISIFPDDGDVPETLLKNADIAMYNAKSQGQGGFCFYSAQLNERLHERM 472 Query: 263 RPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQK 322 + ++ A++RE+F++ YQP++D++ R+T +E LLRW P G + PD+FI AE Sbjct: 473 QLEFKLRGAVEREEFFLEYQPILDSKTGRITAVEALLRWNDPEKGRVMPDSFIPLAEDTG 532 Query: 323 MIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHF 382 +I+PL + + + + + V+ +NI+ ++ L H Sbjct: 533 VILPLGEWVLRTACAKLRQWQDAGVMPVRMAVNISGRQFTQGDLSKTVEDALLQSGVHPS 592 Query: 383 QIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRG 441 + LE+TE ++K +E + L + V I+IDDFGTG+S+L YL+ F +D+LKIDRG Sbjct: 593 WLELELTETCLIKNVEETVRKLCRLKGLCVSISIDDFGTGYSSLQYLKNFPIDHLKIDRG 652 Query: 442 FINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPL 501 FIN + ++DA++ +AK +++ +AEGVET +QA L RG + QGY+ RPL Sbjct: 653 FINNVCELPDDRAIVDAIIGIAKAMDLHVIAEGVETRQQAEHLMRRGCDEFQGYYFYRPL 712 Query: 502 PLDDFVRWLKKPYT 515 P + + L Sbjct: 713 PEEKLLEVLASKAA 726 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 500 bits (1289), Expect = e-140, Method: Composition-based stats. Identities = 104/500 (20%), Positives = 185/500 (37%), Gaps = 58/500 (11%) Query: 27 VSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELT 84 F+ ++ + + L T +L +R L A + Sbjct: 185 AVGASFIFNIFVRDISQRKADEEKLETLAT-RDELTGLINRFSYNHLLKKEVALAKRHME 243 Query: 85 ARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNK 144 + A +++ Sbjct: 244 SLAVLFLDLDG--------------------------------------------FKNIN 259 Query: 145 PAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNV 204 ++ + LL+ + + + + ++ E + I R++N+ Sbjct: 260 DSLGHDVGDQLLRETANRLSACIRESDTVARIGGDEFLIIMPGIKDVHDPRFLCERILNM 319 Query: 205 NELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSV- 260 + + G + + LY D + M ++ ++ Sbjct: 320 IGQPYLIGTQECFVGASIGISLYPLDGDNVESLVKNADTAMYQAKDSGRNAYKFFTPAMG 379 Query: 261 -----RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFI 315 RM R + AI++ QF + YQP V+ + R+ G+E LLRW HP G I P FI Sbjct: 380 EEAFKRMEMERALRYAIEKNQFKLLYQPQVELSSGRILGVEALLRWTHPEWGPISPSVFI 439 Query: 316 NFAESQKMIVPLTQHLFELIARDAAELEKVLPV-GVKFGINIAPDHLHSESFKADIQKLL 374 + E+ +I+P+ + + + + + + P ++ +N A + K L Sbjct: 440 SLIENTNLILPIGEWVLDEACKQNKAWQALHPGFPLRMAVNFAARQFAQADLVETVAKAL 499 Query: 375 TSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTL 433 + LEITE + + E + L +GV IAIDDFGTG S+L YL+RF + Sbjct: 500 QKSGLAAEFLELEITEGSAMNDIELNIRKMQALKELGVSIAIDDFGTGFSSLAYLKRFPI 559 Query: 434 DYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQ 493 D LKID+ F++ I + ++ + +A L M +AEGVET Q +L G + +Q Sbjct: 560 DILKIDKSFLDEIQHGKKDAAIVATISEMAHSLGMEVIAEGVETKYQLEFLRGHGCDMIQ 619 Query: 494 GYWISRPLPLDDFVRWLKKP 513 GY SRP+P + L+K Sbjct: 620 GYLFSRPVPPEQIAEILQKG 639 >UniRef50_B8GNC0 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GNC0_THISH Length = 655 Score = 500 bits (1289), Expect = e-140, Method: Composition-based stats. Identities = 106/492 (21%), Positives = 175/492 (35%), Gaps = 58/492 (11%) Query: 33 LVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFS 90 ++ +++ Y L +R LQ A A Sbjct: 198 YFFALGLDITERRRTQAQLEHIAHY-DLLTGLPNRTLLQNRISHALDVARRRDRQVAILF 256 Query: 91 MNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIW 150 +++ ++ Sbjct: 257 LDL--------------------------------------------DRFKVVNDSLGHA 272 Query: 151 YRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDM 210 Y + LL+ L +L E V + LS + ++ Sbjct: 273 YGDELLRQVSDRLRRRLREEDTLARWGGDEFIVLVDEVDDPQGLSLLAEGILAELAEPYR 332 Query: 211 P-VRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYL------MSV 260 + G + + LY D + M +Y + Sbjct: 333 LSNGQEVFVGGSIGISLYPQDGRSAEQLIMKADTAMYQAKDQGRSNYQFYTSALTLAAND 392 Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R+ + A++RE+F + YQP V TQ + G+E L+RW HP G PDAFI AE Sbjct: 393 RLALETSLRHALEREEFTLHYQPRVRTQDDVMIGMEALVRWHHPDKGLTAPDAFIPMAEE 452 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAH 380 +I PL + R A ++ + +N++ L + I +L Sbjct: 453 TGLITPLGLWVLRTACRQAQTWMRLYGEPIHMAVNLSMRQLRQPDLVSQIDAILRDTGLP 512 Query: 381 HFQIVLEITERDML-KEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 + LE+TE ++ + A L ++GV +AIDDFGTG+S+L YL+R +D LKID Sbjct: 513 ASSLELELTESVLMAGDGHTLTALAELKALGVRLAIDDFGTGYSSLAYLKRLPIDALKID 572 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 R F++ I + + ++ +A+ L + VAEGVETPEQ +L + G + QG+ S Sbjct: 573 RSFVSDIPHDASDMAIASTIIAMARTLGLEVVAEGVETPEQLAFLKKEGCDSYQGFGFSP 632 Query: 500 PLPLDDFVRWLK 511 P+ WL Sbjct: 633 PVDAQAMTLWLD 644 >UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W545_9CYAN Length = 709 Score = 500 bits (1289), Expect = e-140, Method: Composition-based stats. Identities = 100/479 (20%), Positives = 173/479 (36%), Gaps = 61/479 (12%) Query: 55 DTYFADLKSTTDRLQP--LTLDTCQQANPELTAR-AAFSMNVRTFVLVKDKKTFCSSATG 111 D +L +R + A A +++ F +V D Sbjct: 277 DALHDNLTRLPNRTLFMERVNHAIKLAKRNQDYLFAVLFLDLDRFKVVNDS--LGHDVGD 334 Query: 112 EMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTP 171 ++ + + T Sbjct: 335 QLLTATARQLEKC------------------------------------------VRTTD 352 Query: 172 SLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDW 231 ++ + S E + I + + R+ + + + L + + Sbjct: 353 TVAHLSGDEFTILLEDIKDIKDATRVAERIQATLKAPFNLNNHEVFTSASIGIALSSTGY 412 Query: 232 T-----WNDVWYAFLLGGMSGTVVGLLCYYLMSVR----MRPGREIMTAIKREQFYVAYQ 282 D A G + +M R +R ++ A++R++F V YQ Sbjct: 413 ERSEDILRDADIAMYRAKELGKARHEIFDKIMHARALELLRLENDLRRALERQEFEVYYQ 472 Query: 283 PVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAEL 342 P+ +TG E L+RWRHP G + P FI AE +I+PL + + R Sbjct: 473 PITSLVTGMLTGFEALVRWRHPELGLVSPAEFIPVAEDTGLIIPLGEWVLHEACRQLRMW 532 Query: 343 EKVLP--VGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEAT 400 P +K +N++ + I +L + LEITE +++ E Sbjct: 533 HTQFPTPEPLKMSVNLSGKQIKEPDLIEQIDHILAETGLDGSFLKLEITESILMENAETV 592 Query: 401 -QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAV 459 ++ L + +++++DDFGTG+S+L YL RF ++ LKIDR F++ + + + ++ + Sbjct: 593 TKMLLQLRARNIQLSVDDFGTGYSSLSYLHRFPVNTLKIDRSFVSKMNPKNRNTEIIRTI 652 Query: 460 LTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQW 518 +TLA L M +AEGVET EQ L QGY S+PL L PQW Sbjct: 653 ITLAHSLRMDVIAEGVETLEQLTELKLLNCEQGQGYLFSKPLTKCAAGLLL--GGIPQW 709 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 500 bits (1288), Expect = e-140, Method: Composition-based stats. Identities = 92/466 (19%), Positives = 167/466 (35%), Gaps = 56/466 (12%) Query: 58 FADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDI 115 F L +R LQ A +++ F + D E+ + Sbjct: 603 FDPLTGLANRSLLQDRLDRALAHARRHGCKVGLLFLDLDGFKWINDS--LGHDVGDELLV 660 Query: 116 PLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFY 175 + + + ++ ++ Sbjct: 661 DVARRLNSCVRDE------------------------------------------DTVAR 678 Query: 176 SSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWND 235 E V + L + +L+ V + + ++ DD Sbjct: 679 LGGDEFTVVVHDLADRADLGAIADKLVAVLREPFALRGARHHISGSVGITVFPDDGDDVQ 738 Query: 236 VWYAFLLGGMSGTVVGL---------LCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVD 286 M R+ ++ A+++ F + YQP+VD Sbjct: 739 TLLRNADIAMYKAKQAGKNRAQPYAPHMQADALARVHLEADLRMAVEQRAFELHYQPIVD 798 Query: 287 TQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVL 346 + + G E L+RW+HP G I P FI AE +IVP+ + + + R + Sbjct: 799 CASGALVGAEALIRWKHPERGMISPLEFIPVAEECGLIVPIGEWVLREVVRQRRDWLARG 858 Query: 347 PVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQ-LFAW 405 ++ +N++ ++ LL +V EITE ++ E + Sbjct: 859 HPPLRLTLNVSGVQFREAGLPELVRTLLAEFGTARSSLVFEITESVLMGGSENVEARMCD 918 Query: 406 LHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKR 465 + G+ A+DDFGTG S+L YL+RF +D +KIDR F+ + + +++A++ +A Sbjct: 919 IKEQGICFALDDFGTGFSSLSYLKRFPVDIVKIDRSFVRDCPDDRNDATLVEAIINMAHS 978 Query: 466 LNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 L + AEGVE+ EQ +L G +++QGY I +PL D F + Sbjct: 979 LGLRVTAEGVESAEQREFLRALGCDYLQGYLIGKPLAADAFEALMA 1024 >UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1G1_PELCD Length = 1061 Score = 500 bits (1288), Expect = e-140, Method: Composition-based stats. Identities = 107/494 (21%), Positives = 192/494 (38%), Gaps = 56/494 (11%) Query: 33 LVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFS 90 K ++ + ++L T +L +R LQ + A AA Sbjct: 609 HFLAIKEDITDRKRYEEQLQHLAT-HDNLTGLANRALLQDRLEQSILFAKRSGRLVAALL 667 Query: 91 MNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIW 150 +++ F ++ D S G+ + + + +A L Sbjct: 668 LDLDRFKIINDS--LGHS-FGDRLLQIAADRLRESVRGADTVARL--------------- 709 Query: 151 YRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDM 210 E +A + + + ++++ Sbjct: 710 --------------------------GGDEFVILLAEVANEEDVGKVAKKILDRITAPFQ 743 Query: 211 PVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLM--------SVRM 262 L + +Y D + M + L M Sbjct: 744 IADREITVTASLGISIYPQDGEDEETLIRNADIAMYQAKEEGNAFRLYAPEMNIVVHEAM 803 Query: 263 RPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQK 322 ++ A+ R + + YQP +D + ++TG E L+RW+HPV G I P FI AE Sbjct: 804 EMETDLRRALDRGELLLHYQPKIDLDSGKITGAEALVRWQHPVRGMIAPGMFIPLAEETG 863 Query: 323 MIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHF 382 +I+P+ + + E I + V N++ ++ A IQ++L Sbjct: 864 LILPIGEWVLENICLQIKSWQTQGFPLVPIAANLSARQFRNDELIATIQRILQDTGLPPH 923 Query: 383 QIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRG 441 + LE+TE +++ + A + L+++GV +A+DDFGTG+S+L YL RF +D LKIDR Sbjct: 924 LLELELTESMIMRNVQTAAETMQELNALGVSLALDDFGTGYSSLNYLRRFPVDCLKIDRS 983 Query: 442 FINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPL 501 FI+ + + + V +++ +A L + VAEGVET EQ +L + + QGY S PL Sbjct: 984 FISDVADDPSAAAVATSIIAIAHSLGLQAVAEGVETEEQLEFLRQCACDSYQGYLYSAPL 1043 Query: 502 PLDDFVRWLKKPYT 515 +++F L++ T Sbjct: 1044 AVEEFTAMLRQEST 1057 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 500 bits (1288), Expect = e-140, Method: Composition-based stats. Identities = 102/488 (20%), Positives = 191/488 (39%), Gaps = 57/488 (11%) Query: 38 KHEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRT 95 + ++ + + Y L +R L+ +A + +++ Sbjct: 372 QKDITEIRQYQEALERQANY-DTLTGLANRNLLKERMQQAISEARRHNWTFSVAFIDIDN 430 Query: 96 FVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPL 155 F V D SA E+ L + + + + +A L Sbjct: 431 FKRVNDSM--GHSAGDELIRLLGQRLQSC-LRDGDTVARL-------------------- 467 Query: 156 LKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRET 215 E + + ++ T R+ N + Sbjct: 468 ---------------------GGDEFVLLLTSQSLDESIHTVVQRIRNTIINPFIITGRQ 506 Query: 216 KIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSV------RMRPGR 266 + + + D D + M +Y + R+ Sbjct: 507 LTVTCSIGLANFPHDGRNADTLLSNADSAMYQAKASGSNNFRFYAKEMNAELGHRLSLEN 566 Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 ++ A++ +Q + YQP V + ++ G+E L+RW+HP G IPP FI +E +IVP Sbjct: 567 DLWHALENQQLVLHYQPQVCMRNSQIIGMEALIRWQHPKLGMIPPLQFIPLSEDDGLIVP 626 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 + + E A +L+ ++ +N++ L + I+K L + L Sbjct: 627 IGIWVMETAAHQNRQLQLAGYPPIRVAVNLSVRQLEQKDLVHCIEKTLQHSGLDPQCLEL 686 Query: 387 EITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 EITE ++ +E+ + +GV++++DDFGTG+S+L YL+R ++ LKID+ FIN Sbjct: 687 EITESMLMHNIEESIITLNRISDLGVQLSLDDFGTGYSSLSYLKRLPINRLKIDKSFIND 746 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 I T + + +++ LA L + +AEGVE+ +Q +L E G + +QGY +SRP P ++ Sbjct: 747 ITTTYNDAIIARSIIALAHSLEIQVIAEGVESADQYAFLLENGCDEVQGYLLSRPRPFEE 806 Query: 506 FVRWLKKP 513 L+ Sbjct: 807 MEALLRDG 814 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 499 bits (1287), Expect = e-140, Method: Composition-based stats. Identities = 100/487 (20%), Positives = 179/487 (36%), Gaps = 58/487 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDRL--QPLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ ++L + F L +R Q QA+ A +++ Sbjct: 1066 DITERKKAEQDLRFLAS-FDTLTGLPNRTLFQDRLNHAITQAHRANNIVALLFLDL---- 1120 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 ++ + LLK Sbjct: 1121 ----------------------------------------DRFKHINDSMGHHVGDLLLK 1140 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 + + ++ E + + A + S +++ + + ++ Sbjct: 1141 AAAKRLQNAVREGDTVARLGGDEFTIILEGVAKTKAATLISEKVLRAFQTPFLLEDKSLT 1200 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYL------MSVRMRPGREI 268 + + LY +D D F M +Y + + + Sbjct: 1201 ISTSIGISLYPNDADNADSLIKFADTAMYHAKSLGRNNFQFYTHKLNEIATRHVLLEAGL 1260 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 AI R + + YQP + +TGLE LLRW H G I P FI AE +I + Sbjct: 1261 KQAIHRNELSLVYQPKFSLRDGSLTGLEALLRWHHTELGPISPVEFIPLAEETGIINQIG 1320 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + AE + + +N++ L + I+ L + LE+ Sbjct: 1321 HWVINHACQQLAEWNALGFNNISMAVNLSARQLK-ADIISTIEVALAVSGLPAQSLELEL 1379 Query: 389 TERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE ++ ++ + + L ++G+ IAIDDFGTG+S+L YL+RF +D LKIDR F+ I Sbjct: 1380 TESMIMGNPQDSVSILSKLKALGLTIAIDDFGTGYSSLSYLKRFPIDTLKIDREFVRDIT 1439 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + + + A++ LA L + VAEGVET Q +L +G + +QG+ +S+PL D + Sbjct: 1440 NDPDDAAITSAIIALAHSLELNVVAEGVETQAQLNFLGLQGCDEVQGFLLSKPLSAKDCL 1499 Query: 508 RWLKKPY 514 L Sbjct: 1500 TLLGNQS 1506 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 499 bits (1287), Expect = e-140, Method: Composition-based stats. Identities = 104/425 (24%), Positives = 178/425 (41%), Gaps = 17/425 (4%) Query: 104 TFCSSATGEMDIPLN------ELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 + S TG + L L A +NK V + +L + + L++ Sbjct: 628 AYFDSLTGLPNRTLLKDHMELALGQARRLNKFVAVLLLDLDNFKHINDTLGHATGDLLIR 687 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVN-ELTDMPVRETK 216 + +L E + + ++ + + M + E Sbjct: 688 SVAERLRTECRTCDTLARWGGDEFVLLLTDLDDIQNTTSATEKFMALLTERPFATSECDI 747 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMS--------VRMRPGRE 267 + + LY D + M G Y+ S R R Sbjct: 748 NTTASIGIALYPQDGQDPETLLKRADTAMYEAKKNGRNGYHFFSLQLAEQAERRHRMEIN 807 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + +A+K + + YQP +D +R+TG+E LLRW+ P G I P FI AE +I PL Sbjct: 808 LRSALKEGEMQLVYQPQIDLGKVRITGMEALLRWQSPEEGTISPARFIPLAEETGLIYPL 867 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + + + R A +K + +N++ H +I+K+L + LE Sbjct: 868 GEWVLQQACRQGAIWQKTEASPLCVAVNLSAKQFHQPDLAKNIKKILRETGLSPHLLELE 927 Query: 388 ITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 ITE L+ E A + L +GV+ +IDDFGTG+S+L YL++ +D +KI + F+ I Sbjct: 928 ITESVFLENMEAAIEALTELKKLGVQFSIDDFGTGYSSLSYLKKLPIDRIKIAQEFVRDI 987 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 T+ ++ A + +AK L M +AEGVE +Q +L G + MQGY+ ++P+P + Sbjct: 988 DTDDGDKAIIKATIAMAKSLGMKLIAEGVENHQQLAFLLLHGCHAMQGYYFAKPMPAQEV 1047 Query: 507 VRWLK 511 ++ Sbjct: 1048 PSFIH 1052 >UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIL1_9PROT Length = 576 Score = 499 bits (1287), Expect = e-140, Method: Composition-based stats. Identities = 97/487 (19%), Positives = 186/487 (38%), Gaps = 57/487 (11%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTF 96 ++ + TY L +R L+ + N A +++ F Sbjct: 135 VDITERHRAEQRILEMATY-DILTGLPNRALLKDRIERALEHGNRNRQRVALLFIDLDNF 193 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 ++ D ++ + ++ + +A G + Sbjct: 194 KVINDS--LGHDVGDKLLQAVAARFVSI-VRGEDTVARQGGDEFI--------------- 235 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 ++ + + +++N +L + + Sbjct: 236 --------------------------VLLSNLESAFDAEAVAQKILNALQLHFLIDGKEL 269 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGL---------LCYYLMSVRMRPGRE 267 + + L+ DD M R Sbjct: 270 HISGSIGISLFPDDGEDIWTLLRNSDIAMYHAKKNGRNNCEFFKPEMNRQAKERHSMEVA 329 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A+KR++ + YQP+V+ + G EVLLRW+HP G I P FI AE MI+P+ Sbjct: 330 LRNALKRDELLLHYQPIVNVNGGKADGFEVLLRWQHPGDGLIYPVKFIRLAEETGMIIPI 389 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + L ++ + IN++ ++ +I ++L + LE Sbjct: 390 GEWLMRQSCLQIKAWQEQGYEVPRLAINLSAIQFRQKTLMENIVRILDETGVTGHYLTLE 449 Query: 388 ITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 ITE +++++ +E + L +G+EI+IDDFGTG+S L +L+R+ ++ LKIDR F+ I Sbjct: 450 ITESELIEDVEETIKTLRQLSELGIEISIDDFGTGYSNLSFLKRYQINTLKIDRSFVRDI 509 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 + + ++DA+L +A L + +AEGVE +Q +L+ G QG++ S+PLP + Sbjct: 510 PDDPDDTAIIDAILVMAHALGLQVIAEGVENEQQLAYLALHGCTRFQGFYFSKPLPAIEI 569 Query: 507 VRWLKKP 513 + + P Sbjct: 570 EKKMVNP 576 >UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAC3_SULNB Length = 813 Score = 499 bits (1286), Expect = e-140, Method: Composition-based stats. Identities = 106/509 (20%), Positives = 187/509 (36%), Gaps = 62/509 (12%) Query: 18 VAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYF------ADLKSTTDRLQ-- 69 +A V + ++ + ++ ++ L +R Sbjct: 343 LAEVTLTPIMLGKRHVIYTVVRDISDKKKAQQELLKQKDILHHQAHHDALTGLPNRTLFS 402 Query: 70 PLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKN 129 + A L A F +++ F + D ++ + +++ + A Sbjct: 403 DRLEHGLKLAERHLGKLALFFIDLDNFKQINDS--LGHQIGDKVLVVVSKRLKAK----- 455 Query: 130 VDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALII 189 + +L E + Sbjct: 456 -------------------------------------IRQEDTLARLGGDEFTIIMENFK 478 Query: 190 GNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV 249 +S + ++ V T + + Y D + + M Sbjct: 479 DVQQVSVLAQKIQKVLNQPMHIEGHTLYISCSIGISFYPQDTQNANDLVKYADAAMYKAK 538 Query: 250 ---VGLLCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLR 300 +Y + R+ + AIK E+F + YQP V+ Q R+TG+E L+R Sbjct: 539 EEGRNNFQFYSTEMTTLAYERVVMEASLRQAIKNEEFILYYQPQVNAQTSRMTGMEALIR 598 Query: 301 WRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDH 360 W HP G I PD FI AE +I+ + + + + E +N++ Sbjct: 599 WEHPHLGMILPDKFIPLAEESGLILEIDRWVMRTAMKQVREWYARGLDPGVLSLNLSMRQ 658 Query: 361 LHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFG 419 L E+F I++ L + + E+TE M+K +A + S+G+ IAIDDFG Sbjct: 659 LKDENFIDVIKEYLHMMSFEPEWLEFEVTEGQMMKRPDDAVASLGEIKSMGISIAIDDFG 718 Query: 420 TGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPE 479 TG+S+L YL+R + LKID+ FI+ I + + ++ A + LAK L++ +AEGVE E Sbjct: 719 TGYSSLGYLKRLPVSRLKIDQSFIHGIPEDRENAAIVKATIALAKSLSLSIIAEGVENEE 778 Query: 480 QARWLSERGVNFMQGYWISRPLPLDDFVR 508 Q +L G MQGY+ RP+ D + Sbjct: 779 QKEFLLFNGCISMQGYYYGRPMTADQIEK 807 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 499 bits (1286), Expect = e-140, Method: Composition-based stats. Identities = 101/486 (20%), Positives = 182/486 (37%), Gaps = 59/486 (12%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDRLQP--LTLDTCQQANPELTARAAFSMNVRTFV 97 ++ + L Y L +R+ ++ A +++ F Sbjct: 376 DISRMKETEARLQRLAHY-DALTDLPNRVLLNLRLAHGVERVQRSGEMLAVLFLDIDRFK 434 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 V D +L ++ I + Sbjct: 435 NVND---------------------SLGHPVGDELLIEIARRLRSR-------------- 459 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVN-ELTDMPVRETK 216 + +L E + I ++ F+ ++++ + + + Sbjct: 460 ---------IRAEDTLARLGGDEFVILLDRIRSANDVADFAQEIIDLLNQSFQLASGQEV 510 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLM------SVRMRPGRE 267 G + + LY D + + + +Y R+ Sbjct: 511 FVGASIGISLYPLDTDDATQLISNADAALYQAKEAGRNVYRFYTADLTRAAHERLGLEAA 570 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + ++R +F + +QPVV V G E L+RW HP G I P FI AE +IVPL Sbjct: 571 LRRGLERGEFVLHFQPVVALDKGEVVGAEALVRWNHPTEGMIAPLRFIPLAEETGLIVPL 630 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + + E R E + +N++ + A ++ +L + LE Sbjct: 631 GEWVLESACRQGREWLDCG-RPLTIAVNLSTRQFRAGDLTATVRDILDRTGFPAALLELE 689 Query: 388 ITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 ITE ++++ + A A L +GV ++IDDFGTG+S+L YL+RF +D LKIDR F+ I Sbjct: 690 ITESTVMEDADRAVATLAALKGLGVRLSIDDFGTGYSSLAYLKRFAVDALKIDRSFVRDI 749 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 + ++ V+ +A ++ + +AEGVET EQ +L G QGY + RP DF Sbjct: 750 ADDENDRMIVATVVAMAHQMRLGVIAEGVETAEQLAFLRSLGCEAYQGYLVGRPQAAADF 809 Query: 507 VRWLKK 512 + +++ Sbjct: 810 LGAVER 815 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 98/484 (20%), Positives = 174/484 (35%), Gaps = 58/484 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ + ++ F L +R + QA +++ F Sbjct: 398 DITKRKRDEEHIRFQAN-FDMLTHLPNRHLIMDRLEQAMHQAQRTGRQVCVMFLDLDRFK 456 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 + D + SA E+ + Sbjct: 457 QINDS--YGHSAGDEVLKLTARRLRNC--------------------------------- 481 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 + ++ S+ E ++ + A + + +++ Sbjct: 482 ---------VRISDSVGRLGGDEFIVILSNVEDQHAGAYIAEKILYSLSEPFPIGGTEVF 532 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYL-----MSVR----MRPGREI 268 + + + D M G Y M+ R + ++ Sbjct: 533 CIPSVGITYFPDHGETAPDLLRNADVAMYHAKQGGERRYAIFTPDMARRSLALLTMESDL 592 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A+ R++F + +QP V L + G E L+RWRHP G I P FI AE +I+P+ Sbjct: 593 RHALARDEFELHFQPKVR-ADLTLIGAEALIRWRHPEKGLINPGDFIPLAEESGLILPIG 651 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + +N++P ++ ++++L + LEI Sbjct: 652 RWTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQDQTLVETVRQILVETGLEPEALDLEI 711 Query: 389 TERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE M + E A L +GV ++IDDFGTG+S+L YL+ F +D LKID+ F+ + Sbjct: 712 TETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSSLNYLKTFPIDTLKIDQTFVRDVL 771 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + ++ ++ LA+ L VAEGVE EQA +L R QG+ SRPLP +F Sbjct: 772 HSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQGFLYSRPLPPAEFT 831 Query: 508 RWLK 511 +L+ Sbjct: 832 TFLR 835 >UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=uncultured bacterium 9F08 RepID=D2XIQ4_9BACT Length = 965 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 97/484 (20%), Positives = 184/484 (38%), Gaps = 57/484 (11%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTF 96 ++ + Y +L +R L+ T QA+ + A +++ F Sbjct: 387 RDISERLSYEQELERRAHY-DELTGLANRVLLKARLQQTTAQAHRHGKSVAVLFLDLDHF 445 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 +V D + + + + + + Sbjct: 446 KIVNDG--LGHDCGDRLLVAIAQRLQTV-------------------------------- 471 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 + ++ E ++ + RL+ Sbjct: 472 ----------VREADTVARHGGDEFVIVLSEPDNGEDAAEIGRRLLQRIAEPVWIDEHEL 521 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYL------MSVRMRPGRE 267 + V L+ D T D M L +Y +S R+R + Sbjct: 522 YTTASVGVSLFPRDGTDVDTLLRNADAAMYRAKHLGRNNLQFYSEEMNLSLSKRLRMLSQ 581 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A++R + + YQP R+ G+E L+RW+HP G + P FI AE +I P+ Sbjct: 582 LRQAVERNELCLHYQPQASLPGGRLLGVEALVRWQHPELGMVSPAEFIPLAEESGLIEPI 641 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + + R ++ + ++ +N++ + I+ +L ++ LE Sbjct: 642 GEWVLREACRQGVAWDRAGFMPLRISVNLSARQFDNPKLDDTIRDVLEQTGLAPERLELE 701 Query: 388 ITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE ++ ++ Q + + +GV +A+DDFGTG+S+L YL+R+T D +KIDR F+ Sbjct: 702 LTETALIANPQQSVQRLSAIRDLGVRLALDDFGTGYSSLAYLQRYTFDLIKIDRSFVADA 761 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 + ++ V+ +A+ L T+AEG ET E +L G + +QGY+ISRPLP + Sbjct: 762 IRNPGNAAIVRTVIAMARLLGSETIAEGAETAETITFLGRNGCDAVQGYYISRPLPAGEI 821 Query: 507 VRWL 510 + Sbjct: 822 EQLF 825 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 498 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 100/465 (21%), Positives = 180/465 (38%), Gaps = 26/465 (5%) Query: 71 LTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNV 130 T E + R K + L +L + + Sbjct: 244 WTESKINPIMDEEGNVTKLLLITRDVTDRKQSEETIHHL--AYHDALTDLPNRRMYVQQL 301 Query: 131 DMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT--------------PSLFYS 176 ++ + + + N + L + Sbjct: 302 SKEMMQAKRFQSSLAVLFLDLDRFKDVNDSFGHDVGDMLLIEASKRLQACLKPGDVVARL 361 Query: 177 SRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDV 236 E ++ + + ++M + + + LY D + Sbjct: 362 GGDEFTIMQNQLLDRNEATELAEQIMYQLQRPFELDGHVFNVSCSIGIALYPQDGDNPED 421 Query: 237 WYAFLLGGMS---GTVVGLLCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDT 287 + ++ S+ R+ E+ AI++EQF + YQP +D Sbjct: 422 LLKRADTALYTVKSRGKNGYDFFDPSMEAKSLERILMENEMRKAIEQEQFQIYYQPKIDI 481 Query: 288 QALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLP 347 +TG+E L+RW HP G IPP+ FI AE MI+ L + + + + Sbjct: 482 ATSAMTGMEALVRWVHPELGIIPPNRFIPIAEETGMILALGEWILKQACKQNKNWHDQGY 541 Query: 348 VGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLH 407 +K +N++ ++ + I+ +L + LEITE +K +EAT + + Sbjct: 542 T-LKVSVNLSARQIYQKDLVEMIKDILQETKLSPHWLELEITESIFVKMEEATAVLQQIR 600 Query: 408 SVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLN 467 +G++I+IDDFGTG+S+ Y++ +D +KID FI I + ++ A++T+A+ LN Sbjct: 601 DIGIQISIDDFGTGYSSFSYIKSLPVDTIKIDASFIRDIHHNQESQAIVKAIVTIAQSLN 660 Query: 468 MLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 M +AEG+E +Q L E G + QGY S+PLP DDF + L++ Sbjct: 661 MNVIAEGIELHDQVAALKENGCDHGQGYLFSKPLPTDDFDQLLRQ 705 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 498 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 95/394 (24%), Positives = 170/394 (43%), Gaps = 11/394 (2%) Query: 129 NVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALI 188 + + +L + + LL+ + ++ ++ E + Sbjct: 700 RIALLMLDLDRFKDVNDSFGHQIGDALLQEVARRLRRRVRISDTICRLGGDEFTVLIEGN 759 Query: 189 IGNTALSTFSSRLMNVNELTD-MPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS- 246 + F+ ++ + + +P I G + + LY + M Sbjct: 760 PALHDVEHFAEDILQLLKDPFSLPNGREVIIGASIGISLYPEHGQTPKELLQQADAAMYR 819 Query: 247 GTVVGLLCYYLMS--------VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVL 298 G C+ S R+ + A++ + + +QP +D + R+ G E L Sbjct: 820 AKAHGRSCFRYFSDELTRAAEQRLDLEVRLQRALRLNELCLYFQPQIDISSNRIIGAEAL 879 Query: 299 LRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAP 358 +RW+ P G I P FI AE +I L + + R E ++ + +NI+P Sbjct: 880 VRWQDPAHGLISPAQFIPVAEETGLIKQLGEWVLLEACRQGKEWQQKGLPAINLAVNISP 939 Query: 359 DHLHSESFKADIQKLLTSLPAHHFQIVLEITERDML-KEQEATQLFAWLHSVGVEIAIDD 417 + + + L + LE+TE ++ E EA ++ + L G+ +AIDD Sbjct: 940 VQFRNSNILESVFNALKQTGYPASLLELELTESALMTHENEAVEILSALRKYGIRLAIDD 999 Query: 418 FGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVET 477 FGTG+S+L YL+RF LD LKID+ F++ I + + A++ +A L + +AEGVET Sbjct: 1000 FGTGYSSLAYLKRFPLDVLKIDKSFVDDIPHKKDDMEIAAAIVAMAHTLRLKVLAEGVET 1059 Query: 478 PEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 EQ +L E+G + QGY +S P+P D F + L+ Sbjct: 1060 EEQLTFLKEQGCDCYQGYLMSPPVPADQFEQLLR 1093 >UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=B9M1S6_GEOSF Length = 749 Score = 498 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 106/499 (21%), Positives = 184/499 (36%), Gaps = 57/499 (11%) Query: 24 AILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANP 81 + A+ +V + + + L Y+ +L +R L +A Sbjct: 270 VAVFFPETGYFAFLMEDVTQRKVNEEQIRRLA-YYDNLTGLPNRALLMDRLEQMLTKARR 328 Query: 82 ELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMV 141 + T + L Sbjct: 329 DKTRVV--------------------------------------------LLFLDLDRFK 344 Query: 142 PNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRL 201 + + + LL L + +L E L +S + L Sbjct: 345 VINDTMGHAHGDQLLVQVANRLRQALRSSDTLARIGGDEFVVLFTLEGPQLNVSPLAQHL 404 Query: 202 MNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGL---LCYYL- 257 ++ A + + + DD + M G +Y Sbjct: 405 IDSITSVYPISGRDVYASTSIGIATFPDDGGDCNSLLRCADMAMYAAKEGGGKGYHFYSP 464 Query: 258 -----MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPD 312 RM + A++RE+F++ +QP+V+ + R+ G E LLRW P G I PD Sbjct: 465 EMNLKAHARMEMETNLRHALEREEFFLEFQPIVNARDGRLVGAEALLRWSDPEKGLIMPD 524 Query: 313 AFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQK 372 FI AE IVPL + + R + + + +N++ +F + Sbjct: 525 MFIQVAEESGFIVPLGEWVLRTACRKMKDWREAGLPPFRISVNVSGRQFCQANFTDTVCS 584 Query: 373 LLTSLPAHHFQIVLEITERDMLKEQEATQL-FAWLHSVGVEIAIDDFGTGHSALIYLERF 431 ++ + LE+TE ++ + EAT L + + I IDDFG G+S+L YL++F Sbjct: 585 IIRETGMDPSFLALEMTETSLMVDVEATAKALMQLKELDISIVIDDFGAGYSSLGYLQKF 644 Query: 432 TLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNF 491 +D +KIDR FI + + +++A++ +A RL + VAEGVET EQ +L E+G + Sbjct: 645 PIDRIKIDRSFIRDLSSHANDKAIVEAIIAMAARLKLQVVAEGVETSEQLDFLKEQGCHE 704 Query: 492 MQGYWISRPLPLDDFVRWL 510 +QG++ RPL + F L Sbjct: 705 IQGFYFHRPLSEELFKTLL 723 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 498 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 93/424 (21%), Positives = 167/424 (39%), Gaps = 25/424 (5%) Query: 117 LNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLN-------- 168 L L L + A+ ++ N + ++ Sbjct: 629 LTSLPNILLFRDRLQQAMARARREEHKVALLIFDLDRFKEVNDSLGHSVGDLVLTEVAQR 688 Query: 169 ------LTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPL 222 L ++ E Y + + + ++ + + Sbjct: 689 LRQQLSLADTICRPGGDEFYLLLGRLTDIDTAVQAAQNVLELFSKPFQAADHQLYLTPSI 748 Query: 223 TVRLYADDWTWNDVWYAFLLGGMSGTVV---GLLCYYLMSV------RMRPGREIMTAIK 273 + L+ DD + + M ++ ++ RM + A++ Sbjct: 749 GITLFPDDGEEVESLIQSVETAMYHAKKDGGNSFQFFQETMFTAALGRMTMKNRLRRAVE 808 Query: 274 REQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAG-EIPPDAFINFAESQKMIVPLTQHLF 332 E+F + YQP + V G E L+RW P G + P FI AE +I+P+ + + Sbjct: 809 LEEFELYYQPKIAADGRTVVGAEALIRWVQPERGGPVSPAEFIPLAEETGLIIPIGEWVL 868 Query: 333 ELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERD 392 R + ++ ++ +N++ +I +L + + LEITE Sbjct: 869 RQACRQSLLWQQAGLPPLRIAVNLSAVQFKQPGLDDEINWILQEIGLPAELLELEITESL 928 Query: 393 MLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETI 451 ++++ L +G+ +A+DDFGTG+S+L YL+ F LD LKIDR F+ + T+ Sbjct: 929 LMEDVTTANATLWKLKDMGIHLALDDFGTGYSSLSYLKNFPLDTLKIDREFVRDLSTDDE 988 Query: 452 TSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 V+ ++TLA L M VAEGVE +Q +L +RG + QGY SRPLP +F ++L+ Sbjct: 989 DRAVIITIITLAHSLKMEVVAEGVEDADQVAFLRQRGCDVFQGYHFSRPLPAKEFEQFLR 1048 Query: 512 KPYT 515 Sbjct: 1049 SQNA 1052 >UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVV8_DESAC Length = 764 Score = 498 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 92/407 (22%), Positives = 163/407 (40%), Gaps = 10/407 (2%) Query: 116 PLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFY 175 LN+ I +V + + ++ + L + L L Sbjct: 356 RLNQAIARNHEGNHVVLLFIGLDRFTKINESLGREIGDNTLTQAAERFHNCLAENQILAR 415 Query: 176 SSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWND 235 E + + + +L+ + + Y D Sbjct: 416 LGGDEFAVIMEDCRHPQDAAKTAKKLLEQLIEPIHVQPNEIYLTASIGISSYPQDGESPK 475 Query: 236 VWYAFLLGGM-SGTVVGLLCYYLMSVRM--------RPGREIMTAIKREQFYVAYQPVVD 286 + M G Y M ++ A+ R + V YQP + Sbjct: 476 TLMSHADIAMTRAKSEGKDRYQFFEREMTQTTKRVFELENDLRKAVARNELRVYYQPQIQ 535 Query: 287 TQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVL 346 + ++TG+E L+RW+HP G I P FI AE +IV + + + + A Sbjct: 536 LDSQQITGMEALVRWQHPQRGLISPADFIPLAEETGLIVSIGEWVLRQACQQVAMWHDQG 595 Query: 347 PVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAW 405 V +N++P ++ ++ K L + + LE+TE ++ + +T Sbjct: 596 LPAVTVAVNLSPLQFRHKALVRNVAKTLKETGINPACLELEVTESMIMDSIDKSTATMIE 655 Query: 406 LHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKR 465 L +G +AIDDFGTG+S+L YL F L LKID+ FI + ++ + + +V+ LA Sbjct: 656 LTELGAGLAIDDFGTGYSSLSYLRYFPLTKLKIDKSFIERVTSDEHDAALATSVIALAHS 715 Query: 466 LNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 LN+ VAEG+E +Q ++L +R + QG+ SRP+P +D + L++ Sbjct: 716 LNLKVVAEGIEHEDQVQFLVKRSCHQGQGFLFSRPVPAEDMEQLLRQ 762 >UniRef50_Q1GYK0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GYK0_METFK Length = 617 Score = 498 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 105/486 (21%), Positives = 184/486 (37%), Gaps = 59/486 (12%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTF 96 E+ YL F L +R+ T +A+ +++ F Sbjct: 166 DEITQRKQAN--LFYLAH-FDQLTKLPNRVLFMDRLAMTLAEASRTNAQVGLLFIDLDKF 222 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 D + ++ I L ++ Sbjct: 223 KHFNDSM--GHAFGDQLLIALAGILARC-------------------------------- 248 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 ++ S E V I G L R+++ +L + Sbjct: 249 ----------SREMDTVARLSGDEFTIIVDSISGQKDLDILCWRILDALKLPQQIMGREI 298 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGL---LCYYLMSV------RMRPGRE 267 + +Y D + M +Y + RM + Sbjct: 299 FISASIGTAIYPLDDEDANNLMIKADAAMYEAKRNGRNTYRHYAAGMQLYSLDRMSLETD 358 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + AI+R +F + YQP + + +V G E L+RW HP G + P FI AE +IV + Sbjct: 359 LRLAIERNEFELYYQPQIALDSGQVVGKEALIRWHHPQRGLLTPIHFIEIAEETGLIVAI 418 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 Q + R + ++ +NI+ + F ++ +L + + E Sbjct: 419 GQWVISEACRQHQAWLQEGFQPMRISVNISAMQFYQSDFCDMVEHILKETRINPAYLEFE 478 Query: 388 ITERDMLKEQEA-TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE +++ +A + L +G+++AIDDFGTG+S L YL +F +D LK+D+ FI I Sbjct: 479 LTESMFMQDADAVVRTLHQLSRLGIKLAIDDFGTGYSNLSYLRKFPIDRLKVDQSFIKGI 538 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 E I ++ ++ LA+ +++ VAEGVET + W G F+QGY S+PLP + F Sbjct: 539 EREPINVEIVKTIVALARSMSLELVAEGVETDVELHWAESSGCTFVQGYRFSQPLPAEKF 598 Query: 507 VRWLKK 512 RW+++ Sbjct: 599 TRWVRE 604 >UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ20_DESAC Length = 814 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 100/425 (23%), Positives = 176/425 (41%), Gaps = 23/425 (5%) Query: 112 EMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT- 170 L L + +D AI G ++I + N + L Sbjct: 376 ATHDELTGLANRTLLLDRLDHAIEEGMRQHHAVAVLLIDLDRFQVINDSLGHDQGDRLLC 435 Query: 171 -------------PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 ++ E + + +L L+ + Sbjct: 436 QIGKRLCQHVRSTDTVSRLGGDEFALVLGDLNNEESLIPLMQDLLKEISSPCHIDNHHIV 495 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVV--GLLCYYLMSVR------MRPGREIM 269 + + L+ +D + M + G +Y + + +++ Sbjct: 496 VTASIGISLFPNDGNDSITLLRNADLAMYQSKRHKGDFTFYSSDMNQHAVKILELEKDLR 555 Query: 270 TAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQ 329 A++R + + YQP V Q+ ++ G E L+RW+HP+ G + P FI AE +IVP+ Sbjct: 556 QALERGELLLHYQPKVSLQSGKIVGCEALIRWQHPLRGLVSPADFIPLAEETGLIVPIGT 615 Query: 330 HLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEIT 389 + E + A ++ + +N++ + + +L + H + LEIT Sbjct: 616 WVLEQACQQAISWQQQQLPTITMAVNLSSRQFRHGNLCDVVDTILETTTLHPDLLDLEIT 675 Query: 390 ERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGT 448 E ++ + E A Q L GV +++DDFGTG+S+L YL RF +D LKID FI + Sbjct: 676 ESMIMDDPEGAVQTMIALKERGVLLSLDDFGTGYSSLNYLRRFPVDCLKIDASFIRDVAQ 735 Query: 449 ETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVR 508 ++ ++ V +++ +A L + TVAEGVET EQ +L + + +QGY SRPLP +DF Sbjct: 736 DSSSAAVAVSIVDIAHHLGLTTVAEGVETVEQLDFLEKCHCDILQGYLYSRPLPAEDFTS 795 Query: 509 WLKKP 513 L+ Sbjct: 796 LLRSN 800 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 497 bits (1281), Expect = e-139, Method: Composition-based stats. Identities = 99/485 (20%), Positives = 181/485 (37%), Gaps = 58/485 (11%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTF 96 E+ ++L Y L +R LQ A E T A +++ Sbjct: 300 AEITDQRAAASRIQFLAHY-DPLTLLPNRALLQDRMHQGLAHAAREGTRAAVLFLDL--- 355 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 ++ + LL Sbjct: 356 -----------------------------------------DRFKTINDSLGHLVGDHLL 374 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 + ++ ++ E + + + + +++ E T Sbjct: 375 QEVAQRLKASVREDDTVARRGGDEFIVMLPHVDSAEQAAHVAGKIIEAMEQTIPVNGYVL 434 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMS---GTVVGLLCYYLMSV------RMRPGRE 267 + + ++ DD D M + ++ + R+ + Sbjct: 435 NVSFSIGISVFPDDAMDPDTLIRNADIAMYRSKASGRNQFQFFTADMNAHALERLALEND 494 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A++R +F + +QP + + + G E LLRW+HP G + P FI AE +IVP+ Sbjct: 495 LHRAVERGEFRLMFQPQFE-GSGSIIGAEALLRWQHPQRGLVTPAEFIPVAEETGLIVPI 553 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + E + + +NI+ ++ I++LL + LE Sbjct: 554 GTWVLERACQQVRAWRDAGLKKITVSVNISALQFSQKNLLELIRRLLAVSNIEPGTLELE 613 Query: 388 ITERDMLKEQEATQ-LFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE ++ + AT L + L +GV +AIDDFGTG+S+L YL F + LKID+ F+ + Sbjct: 614 LTESVLMHDHVATSGLMSELKEMGVRMAIDDFGTGYSSLSYLRSFPISKLKIDQSFVRDL 673 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 + A++ LAK LNM +AEGVET +QA +L + + QG++ S+P+ + F Sbjct: 674 SDGGDAGAITGAIIGLAKNLNMRVIAEGVETAQQASFLQAQCCDEFQGHFFSQPVSPEKF 733 Query: 507 VRWLK 511 L+ Sbjct: 734 AELLR 738 >UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZB1_DESAC Length = 1092 Score = 497 bits (1281), Expect = e-139, Method: Composition-based stats. Identities = 97/428 (22%), Positives = 179/428 (41%), Gaps = 24/428 (5%) Query: 112 EMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT- 170 PL +L L + ++ A+ + I N + ++ L Sbjct: 653 AFHDPLTQLPNRLRFTEVLEAAVGDAEGHGRYLSLLFIDLDRFKNINDSLGHSIGDKLLQ 712 Query: 171 -------------PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 L E + + + + R+++ + Sbjct: 713 AVARRTGSLIDSADVLARLGGDEFAILLFNCVTPVVGADTAQRVIDALSQPFQIDDYSLH 772 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSVRMR------PGREI 268 + + + D D M +Y S+ ++ ++ Sbjct: 773 VSASIGITVAPVDAREPDELIKCADIAMFKAKDAGRNTYKFYERSMNLKTHELLLLENDL 832 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A+ R+Q + YQP +D Q+ + G E LLRW HP G + P FI AE +IV + Sbjct: 833 RHALSRDQLELYYQPQLDLQSNCIVGFEALLRWNHPERGLVSPLEFIPLAEETGLIVSMG 892 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + R + ++ +NI+ H ++K+L + LEI Sbjct: 893 EWILRSACRQIRTWNEEHGRQLRVAVNISARQFHHYDLVHCVEKVLEQTGVPTEWLELEI 952 Query: 389 TERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE ++ + + + + L +GV +AIDDFGTG+S+L YL++F + LKID+ F++ + Sbjct: 953 TESLLMYDIQSSIETMMRLKKLGVRLAIDDFGTGYSSLSYLKKFPICSLKIDKSFVDDLL 1012 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 T+ + + ++ L LA +++++ VAEG+E EQ +L +RG F QGY ISRPLP+ Sbjct: 1013 TDASDAAIAESTLALASKMDLMVVAEGIEQQEQLDYLQQRGCQFGQGYLISRPLPVAQCT 1072 Query: 508 RWLKKPYT 515 ++ ++ +T Sbjct: 1073 QFCRERFT 1080 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 497 bits (1280), Expect = e-139, Method: Composition-based stats. Identities = 95/433 (21%), Positives = 174/433 (40%), Gaps = 11/433 (2%) Query: 94 RTFVLVKDKKTFCSSATGEMDIPLNELIPALDINK-NVDMAILPGTPMVPNKPAIVIWYR 152 R L + + L + + N+ + + ++ + Sbjct: 468 RIRHLAHHDTLTNLANRFSLHEKLAQALAFCKRNRMQLALMLIDLDRFKTINDTLGHQAG 527 Query: 153 NPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPV 212 + LL + + + + E + I + + + + Sbjct: 528 DELLVQVAKRLSHAVRESDIVARLGGDEFVIALPGIGSPADAAHLADDITREISAPYLIK 587 Query: 213 RETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYL------MSVRMR 263 + + + +Y D + M G ++ + RM Sbjct: 588 GQELRTSPSIGICVYPGDGSEIGDLLKNADVAMYHAKANGRGNYQFFTEDMNIATTERMC 647 Query: 264 PGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKM 323 ++ AI R +F + YQP +D ++ + G+E L+RW+HP G + P FI AE M Sbjct: 648 LESDLRLAITRREFLLHYQPQLDLRSGTIVGVEALIRWQHPTRGLVSPADFIPIAEESGM 707 Query: 324 IVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQ 383 I + + E R + ++ IN++ ++ A I +LL + + Sbjct: 708 IAAIGDWVLEEACRQLKVWQNRGITHLRMSINLSAGQFLDKTLPARIHELLAANDLSADR 767 Query: 384 IVLEITERDML-KEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGF 442 + LE+TE + E+ + L S G+ ++IDDFGTG+S+L YL+ + LKIDR F Sbjct: 768 LDLEVTESMSMASPDESISVMKTLSSSGLTLSIDDFGTGYSSLAYLKLLPIHTLKIDRSF 827 Query: 443 INAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 + I ++ + + D + LA +L + VAEGVET Q ++L G +QGY IS+PLP Sbjct: 828 VKDIESDPNDADICDVTVLLAHKLGLEVVAEGVETEAQLKFLLSIGCEKVQGYLISKPLP 887 Query: 503 LDDFVRWLKKPYT 515 D R+++ Sbjct: 888 ADQAERFIRNNPP 900 >UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUR6_PELPD Length = 729 Score = 497 bits (1280), Expect = e-139, Method: Composition-based stats. Identities = 107/490 (21%), Positives = 195/490 (39%), Gaps = 57/490 (11%) Query: 34 VAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSM 91 VA ++ +++ YF L +R+ A + + A + Sbjct: 281 VATLFEDITERRKSEQQIQHMA-YFDSLTDLPNRVLFLDRLRQAIAHALRDENSLAVLFL 339 Query: 92 NVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWY 151 ++ F + D T SA ++ I + + Sbjct: 340 DLDRFKDIND--TLGHSAGDQLLIQVTRRLGR---------------------------- 369 Query: 152 RNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMP 211 + +L E V + + + L+N + + Sbjct: 370 --------------QIRSCDTLARLGGDEFVVIVTDLGKKMNATRVAQDLINAIQPPFLI 415 Query: 212 VRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSV------RM 262 + + L+ DD + M + +Y S+ RM Sbjct: 416 AGRELHVTTSIGIALFPDDGNNAETLVKHADLAMYSSKESGRNRYNFYSASMNQKALMRM 475 Query: 263 RPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQK 322 + A++R +FYV +QP+++ V E L+RW HP G IPPD FI+ AE Sbjct: 476 ETEAGLRNALERREFYVEFQPIMNAADSTVVAAEALVRWNHPTRGRIPPDQFIDLAEETG 535 Query: 323 MIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHF 382 ++VPL + + + ++F +N++ + + F ++ L A+ Sbjct: 536 LVVPLGEWVLRTVCSRIKTWSDAGLPLIRFSVNVSSRQIERQDFAEIVRNALRESGANSA 595 Query: 383 QIVLEITERDMLKEQEA-TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRG 441 Q+ +E+TE +++ + L GV AIDDFGTG+S+L Y++ +D++KIDR Sbjct: 596 QLEIELTESCLIRHSDTNISDLFGLKEWGVSFAIDDFGTGYSSLGYIKTLPIDHIKIDRS 655 Query: 442 FINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPL 501 F+ I T+ +++A++ +++RL + +AEGVET EQ R+L ERG +QGY+ RPL Sbjct: 656 FVRDISTDFHDQAIVEAIIAMSQRLGIRNIAEGVETIEQVRFLQERGCEEIQGYYFHRPL 715 Query: 502 PLDDFVRWLK 511 + L+ Sbjct: 716 SAEALEELLR 725 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 496 bits (1279), Expect = e-139, Method: Composition-based stats. Identities = 102/483 (21%), Positives = 174/483 (36%), Gaps = 57/483 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ + YL Y L +R L A A +++ Sbjct: 495 DITERKKEEERINYLANY-DVLTGLPNRYLLSDRIEQAFSSAQRNNFKVAVLFIDL---- 549 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 ++ + LLK Sbjct: 550 ----------------------------------------DYFKNINDSLGHDIGDALLK 569 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 L + ++ E ++ + + + + +++ Sbjct: 570 LVAARLKTCLRRSDTIARLGGDEFVALLSELDSSEEVIFVAEKMIESLTEKFTLGEYQLS 629 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSV------RMRPGREI 268 + + +Y DD + M +Y + R++ + Sbjct: 630 ITPSIGICIYPDDGETSVELLRNADLAMYQAKDDGRNNFKFYSPDMNRKALERLKLETFL 689 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 AI ++Q V YQP V + ++TG+E LLRW+HP G I P FI AE +I + Sbjct: 690 RVAIVQQQLSVYYQPKVSVLSGKMTGMEALLRWQHPELGFISPAVFIPIAEETGLINEIG 749 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + A + V +N++ L ++F A + +L +VLEI Sbjct: 750 DWVLRQSCLQARLWQAQGYDIVPIAVNLSARQLKQDNFAARVVTILREAGLDAHYLVLEI 809 Query: 389 TERDMLKEQEA-TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE ++ E+ Q+ L GV +A+DDFGTG+S+L L+ LD LKID+ F+ I Sbjct: 810 TESMLMSTGESGLQILEQLRDDGVRLALDDFGTGYSSLSRLKNLPLDSLKIDQSFVRDIV 869 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 T+ + ++ A LA LN+ AEGVET EQ ++ QGY SRP+P + V Sbjct: 870 TDPNDASIVSATAVLAHALNLKVTAEGVETQEQLDFIRMLNCEEYQGYLFSRPIPASEVV 929 Query: 508 RWL 510 ++ Sbjct: 930 KYF 932 >UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=Q39WZ5_GEOMG Length = 739 Score = 496 bits (1279), Expect = e-139, Method: Composition-based stats. Identities = 89/487 (18%), Positives = 176/487 (36%), Gaps = 57/487 (11%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTF 96 ++ + L L +R+ AN A +++ Sbjct: 291 RDITERKHAEEQLYRLAH-HDTLTGLPNRILFMDRLQQAKALANRYRYQVAVLFLDL--- 346 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 + + LL Sbjct: 347 -----------------------------------------DRFKIINDTLGHPVGDHLL 365 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 + A + ++ E + + + +++ Sbjct: 366 QQVAHRIAGCVREVDTVARIGGDEFTIILVNVDTVEDVKRMGQKILKTLAAPFNIDTHEL 425 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMS---GTVVGLLCYYLMSV------RMRPGRE 267 + + L+ D D M G + +Y + R+ Sbjct: 426 FVTASIGISLFPSDGDNLDQLVKKADIAMYCVKGEGRNNVQFYSPQMDANADKRLLLETS 485 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A+ +F V YQP VD + R+T +E L+RW HP+ G + P FI AE +I+P+ Sbjct: 486 LRKALDNREFRVYYQPKVDIVSKRITAMEALIRWDHPILGLVSPGEFIPLAEETGLIIPI 545 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + + E + ++ +N++ ++ I+ +L + LE Sbjct: 546 GEWVLRAACFQNCEWVRQGIPPMRVAVNLSGYQFQQKNLLETIRGILDETGLTADLLELE 605 Query: 388 ITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 ITE +++ + A + L +GV I+IDDFG G+S+L +L+RF+++ LKID+ F+ + Sbjct: 606 ITESVIMQNPDFAVSVLNQLRDLGVHISIDDFGIGYSSLAHLKRFSVNTLKIDKSFVRDV 665 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 + + + A++ + LN+ +AEGVET Q +LS+ + +QGY S P+P + Sbjct: 666 EINSADAAIATAIIAMGNSLNLKVIAEGVETEGQLSFLSDNKCDEVQGYLFSTPMPPEKV 725 Query: 507 VRWLKKP 513 ++++ Sbjct: 726 AEFMREH 732 >UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSM4_THISH Length = 648 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 113/511 (22%), Positives = 195/511 (38%), Gaps = 45/511 (8%) Query: 14 LTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTY-FADLKSTTDRLQ--P 70 L IV L S + + + ++ + Y L + +R+ Sbjct: 168 LLSIVLFNTAYALESAALYALMEQQQRTLKKITERQSKELVHQYSHDLLTNLPNRILFVD 227 Query: 71 LTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNV 130 + + A +++ F V D + + L E + + + Sbjct: 228 RLEQSIGRRASRDAHLAVILLDLDNFKRVNDS--LGHKSGDLLIKQLGEDLRKVFL--GN 283 Query: 131 DMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIG 190 ++A G + +L E + + Sbjct: 284 ELARRYGIE----------------------------ASSITLSRLGGDEFGIILDEVDS 315 Query: 191 NTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTV 249 + L+ V + + ++ D D M Sbjct: 316 LDLVVRIVQHLIEVISREHDIEGHQVFLTCSVGISVFPYDGDDADTLIKNADAAMYDAKQ 375 Query: 250 VGLLCYYLMS--------VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRW 301 G + + ++ +++ A+ RE+F V YQP VD + +V G E L+RW Sbjct: 376 RGRNSFQFYTKDINSQTYRQLILENQLVKALAREEFEVHYQPQVDVISGQVVGAEALVRW 435 Query: 302 RHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHL 361 RHP G PP FI AE +I L + + + +D +L + + IN++ Sbjct: 436 RHPEKGLQPPANFIAIAEETGIIEGLGAWVLQKVCQDIRQLTRDGYRIPRISINLSARQF 495 Query: 362 HSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGT 420 + + S I LE+TE ++K+ + A + L+++GV +AIDDFGT Sbjct: 496 RQSDLVEQCRNTIRSAGIAPAYIELELTESTIMKDIDIAVGMLRQLNALGVRLAIDDFGT 555 Query: 421 GHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQ 480 G+S+L L+ F +D LKID+ F+ I + ++ A++ LAK L + VAEGVET EQ Sbjct: 556 GYSSLNNLKHFPIDTLKIDKSFVRDIPGDRDDEAIVTAIVALAKSLELEVVAEGVETREQ 615 Query: 481 ARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 +L G +QGY+ SRPLP + F +LK Sbjct: 616 LGFLKRLGCEIVQGYFFSRPLPFEGFREYLK 646 >UniRef50_Q2W3S8 Predicted signal transduction protein containing a membrane domain n=4 Tax=Bacteria RepID=Q2W3S8_MAGSA Length = 548 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 95/414 (22%), Positives = 172/414 (41%), Gaps = 13/414 (3%) Query: 109 ATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLN 168 G+ ++ A +V + + A+ + LL + + Sbjct: 132 LFGDRIGQ--AVLQANRTGASVALMTMGLDRFTLVNDALGHGAGDRLLMEVARRLKMCVR 189 Query: 169 LTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYA 228 T + + +A+ + ++ + + +N + + + + + +Y Sbjct: 190 ETDTAVRLDGDKFALVMAIADTDDSV-IVAEKALNAVKEPFALDGQEVVVTFSIGISVYP 248 Query: 229 DDWTWNDVWYAFLLGGM-SGTVVGLLCYYLMSV--------RMRPGREIMTAIKREQFYV 279 D + + V G Y S R+ + A+ ++F V Sbjct: 249 LDADSSAQLVKHAENALHYAKVSGRNQYQFFSKDMNRKAKSRLELEGRMRRALANQEFVV 308 Query: 280 AYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDA 339 YQP V + G E L+RW P G +PP FI AE I P+ + Sbjct: 309 FYQPKVSADRDAIVGAEALIRWMDPERGMVPPGEFIPVAEESGQIEPIGTWVLRQSCIQN 368 Query: 340 AELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE- 398 ++ +K +N++ S S + ++L S + LEITE ++ + + Sbjct: 369 RLWQEAGFNPIKVSVNVSARQFRSPSLLQTVTEVLDSTGLDPKWLELEITESMLMNDVDT 428 Query: 399 ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDA 458 A + L +G+ ++IDDFGTG+S+L YL RF + LKIDR FI + T T+ + A Sbjct: 429 AVRKMKALRDLGIGLSIDDFGTGYSSLSYLGRFPITTLKIDRAFIADVDTNPKTAEIARA 488 Query: 459 VLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 ++ L++ LN+ VAEG E E +L G + +QG++ SRP+P D+F R + + Sbjct: 489 IIGLSRGLNLEVVAEGAEIAEHIMFLRNNGCDTVQGFYYSRPVPADEFERMMGQ 542 >UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=A1TZQ7_MARAV Length = 819 Score = 495 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 102/476 (21%), Positives = 181/476 (38%), Gaps = 58/476 (12%) Query: 48 TDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTF 105 + + + + L +R QA + + +++ F + D T Sbjct: 382 QQLLRQAN--YDILTGLPNRMLALDRLKLALAQARRDESKVGVMFLDLDNFKHIND--TL 437 Query: 106 CSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAAL 165 A + I I + Sbjct: 438 GHDAGDTLLIEAARRISSCLRG-------------------------------------- 459 Query: 166 NLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVR 225 T ++ E + + G A S + R++ M + + + Sbjct: 460 ----TSTVARLGGDEFLVVLPGLNGPDASSQVAERILKTFAPPFMLSGQEVFVTTSIGIA 515 Query: 226 LYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLM--------SVRMRPGREIMTAIKREQ 276 + DD + M G Y R++ + A++ + Sbjct: 516 TFPDDSDNSGTLLQHADAAMYEAKHKGKSAYARFTPEMSEVSHERLQMESHMRKALELGE 575 Query: 277 FYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIA 336 F + +QP+VDT + + E LLRW +P G + PD FI AE +I+P+ + + + Sbjct: 576 FELYFQPIVDTASGGLVAAEALLRWNNPAMGMVMPDRFIPLAEETGLIIPIGEWVVKEAC 635 Query: 337 RDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKE 396 + A + + + +N++P F I + L + LEITER +L Sbjct: 636 QAAYCWQAMTGREISIAVNVSPRQFRDPGFTDAIMRALNDSNLRPELLELEITERLILDN 695 Query: 397 Q-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPV 455 E + L VG+ +++DDFGTG+SAL YL+ + D LKID+ F+ + E + + Sbjct: 696 SIETADILKQLDKVGIRLSVDDFGTGYSALSYLKSYPFDTLKIDKSFVQDVLKENEDASL 755 Query: 456 LDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 + A++ +A L + VAEGVE + +L ++ QGY+ SRPLP DF+ WL+ Sbjct: 756 VRAIINMAHSLGLKVVAEGVEEEDLTHFLKAEHCDYSQGYFYSRPLPEQDFIHWLE 811 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 495 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 110/499 (22%), Positives = 195/499 (39%), Gaps = 58/499 (11%) Query: 28 SCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRL--QPLTLDTCQQANPELTA 85 + ++ + + +L L +RL Q Q+A T Sbjct: 776 TGAISHYIGSFTDISERKVNEERIHFLAH-HDSLTLLPNRLSLQSRLEKVFQEAFISQTQ 834 Query: 86 RAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKP 145 A +++ F + D T + + + + I+ Sbjct: 835 IAVMFIDMDHFKNIND--TLGHHVGDMLLLEVARRLKN----------IMGND------- 875 Query: 146 AIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVN 205 + E ++ + ++ + L + Sbjct: 876 -------------------------DIVARLGGDEFVVVLSDTDHDR-VAKVAEALRSGL 909 Query: 206 ELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS---GTVVGLLCYYLMSV-- 260 T + + + + + L+ D + M ++ ++ Sbjct: 910 NQTYLIDNKPLHSSPSIGISLFPTDGDSVEALMKNADMAMYRAKAAGRNNYQFFTAAMNT 969 Query: 261 ----RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFIN 316 R + + AI + + YQP VD + +V G+E L+RW+HP G + PD FI Sbjct: 970 LVTERQQIETGLRQAIACNELLLYYQPQVDISSGQVVGVEALIRWQHPELGLVAPDRFIP 1029 Query: 317 FAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTS 376 AE MI+P+ Q + E AE G++ +N++ L ++ ADI +LT Sbjct: 1030 IAEEIDMIIPIGQWVLENALAQLAEWRDKGAKGLRMAVNLSAHQLRKDTIVADIINVLTK 1089 Query: 377 LPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDY 435 + LEITE ++ E +L A L G+E+AIDDFGTG+S+L YL+ LD Sbjct: 1090 HKLGKGALELEITESVAMQYPEQNAKLLAELRQHGIELAIDDFGTGYSSLSYLKLLPLDR 1149 Query: 436 LKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGY 495 LK+DR F+ I ++ + + A +++A L + VAEGVE Q LS G + +QGY Sbjct: 1150 LKLDRSFVKDIESDPNDAAISAATISMAHELGLTVVAEGVENEAQLVLLSGMGCDLVQGY 1209 Query: 496 WISRPLPLDDFVRWLKKPY 514 + S+PL DD R++++ + Sbjct: 1210 YFSKPLAADDCFRFIERNF 1228 >UniRef50_B7S1Z2 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S1Z2_9GAMM Length = 570 Score = 495 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 104/498 (20%), Positives = 204/498 (40%), Gaps = 45/498 (9%) Query: 33 LVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRL-----QPLTLDTCQQANPELTARA 87 + + D +YL Y+ L S +R L C T A Sbjct: 97 YMLRASNAFNSLKRQEDRLRYLA-YYDPLTSLPNRRSFNEQLNRILKRC---RRHKTNAA 152 Query: 88 AFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAI 147 +++ F + D + + + + + +++ ++ Sbjct: 153 LLFIDLDHFKRINDSI--GHGRGDRLLVEIAKRL-TVELREDDA---------------- 193 Query: 148 VIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNEL 207 + +Y + ++ N + E ++ I + + R++ Sbjct: 194 INYYSDNSAEDDS------NNSNTEIARLGGDEFTVVLSDIPNAGQVERVAQRILAALSE 247 Query: 208 TDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV-VGLLCYYLMSV------ 260 + + + L+ D D M G C+ Sbjct: 248 PIALQSHNPVVTPSVGIALFPQDGEDPDTLVRNADTAMYAAKAQGRACFRFYDEEMNAKA 307 Query: 261 --RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFA 318 +++ E+ A++ + + YQP VDT V +E L+RW+H G + P FI A Sbjct: 308 VEQLKMEEELRDAMQNNELELRYQPQVDTATGDVVSMEALVRWKHSTRGMVSPLDFIPVA 367 Query: 319 ESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLP 378 E I+ L + + + +AR + + + +NI+P + I + L Sbjct: 368 ERTGQIIELGEWVMKEVARHCNYWDSMGLPPFRVCVNISPLQFNQSDLPRSIGEFLRESG 427 Query: 379 AHHFQIVLEITERDMLKEQEA-TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLK 437 ++ LE+TE ++ + + + L ++G+E+A+DDFGTG+S+L YL+RF +D LK Sbjct: 428 MQASRLELELTESAIMTDAQTNIEKLQQLKALGLELAVDDFGTGYSSLSYLKRFPIDTLK 487 Query: 438 IDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWI 497 ID+ F+ +GT T + ++DA++ L+K LN+ +AEG+E EQ +L RG + +QGY+ Sbjct: 488 IDQSFVADLGT-TDGAAIVDAIIALSKTLNLRVIAEGIEEKEQLDYLVARGADLLQGYFF 546 Query: 498 SRPLPLDDFVRWLKKPYT 515 +RP+ +D L++ ++ Sbjct: 547 ARPIYPEDVPDMLRQNFS 564 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 99/425 (23%), Positives = 177/425 (41%), Gaps = 24/425 (5%) Query: 117 LNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT------ 170 L L +N+ A+L + I N L N + L Sbjct: 394 LTGLANRNLLNERTQQALLQARRHDHFLSLVFIDLDNFKLVNDSMGHGAGDELIANVGSR 453 Query: 171 --------PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPL 222 ++ E + + + + R+ + + + Sbjct: 454 LQTCVRDGDTVARIGGDEFVLLLTNQSVSDSNAGVMQRIQAELIKPMWIRGQEIVVTCSM 513 Query: 223 TVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSV------RMRPGREIMTAIK 273 V + +D ++ A M +Y + R+ ++ A+K Sbjct: 514 GVARFPEDGEDSESLLANADTAMYRAKSSGRNNFQFYTKEMNATSGERLSLESDLWHALK 573 Query: 274 REQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFE 333 ++ ++ YQP +D + V G+E L+RW+HP G I P FI AE +I+P+ + E Sbjct: 574 NDELFLVYQPQIDLRDGTVIGMEALIRWQHPKRGLIAPMDFIPMAECNGLIIPIGIWVLE 633 Query: 334 LIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDM 393 R +L+K ++ IN++ L +F +Q ++ ++ + LE+TE + Sbjct: 634 TACRHNLQLQKEGLPPIRVAINLSARQLSDRNFVESVQSVIEAIGLDPHYLELEVTESMV 693 Query: 394 LKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETIT 452 + E L+ +G+++++DDFGTG S+L YL+RF +D LKID+ FI ++ Sbjct: 694 MHNVEDVVVTLNDLNKMGIQLSLDDFGTGFSSLAYLKRFPIDRLKIDQSFIFNCDSDPGD 753 Query: 453 SPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 + + ++ LA L + +AEGVE E +L + G + QGY+ISRPL DD +L Sbjct: 754 AIIAQTIIALAHGLKIKVIAEGVEKSEHLSFLKKNGCDEGQGYFISRPLTFDDLRMFLLT 813 Query: 513 PYTPQ 517 P Sbjct: 814 GKNPH 818 >UniRef50_A8GGV3 Diguanylate phosphodiesterase n=11 Tax=Enterobacteriaceae RepID=A8GGV3_SERP5 Length = 528 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 232/513 (45%), Positives = 326/513 (63%) Query: 2 FIRAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADL 61 F R + R+ L+ V ++ IL + + H+ + QK+ F +L Sbjct: 7 FARHVSHRRRSLVKSSVVALVFFILFMGITLSLINHQRTQYQRAVEQRTQKFTLDTFNNL 66 Query: 62 KSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELI 121 RL PLT C + PE+T +AAF VRTF+LVK+ +CSSATG+M + L + Sbjct: 67 TQIMQRLMPLTEQPCSSSQPEITYQAAFHAGVRTFMLVKNGFAYCSSATGDMMLALKNIY 126 Query: 122 PALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQED 181 P +D + +D+ + GTP+VP KPA +W R +++G+ A L++ L P + + E Sbjct: 127 PEIDQRQRLDLKLQQGTPLVPGKPAFAVWLRQAGKEDTGILATLDIGLMPQQMFGTSPER 186 Query: 182 YDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFL 241 G+A+I+G+ AL++FS LM VN+L D IAG P+ + Y T ND+ L Sbjct: 187 APGIAIILGDRALTSFSPNLMPVNQLPDEKADRISIAGTPMIIMFYNQKLTPNDIRLTLL 246 Query: 242 LGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRW 301 + ++G+LCYY++ +R P R +M IKR +F++ YQPV T+ + GLE L+RW Sbjct: 247 GSLVLSLMIGVLCYYMLLLRQSPERALMRGIKRNEFFIEYQPVFHTKTGTIAGLEALIRW 306 Query: 302 RHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHL 361 +HP+ G IPPD FI +AES+ +IVPLT+HLF LIA DA L LP G K G+NI+P HL Sbjct: 307 QHPIEGRIPPDLFIPYAESEGLIVPLTRHLFRLIAEDAPRLATALPQGAKLGLNISPSHL 366 Query: 362 HSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTG 421 + SF D+ +LL LP ++F +V EITER M++E A F WLH G+EIAIDDFGTG Sbjct: 367 SAPSFHQDVYELLAQLPGNYFTLVFEITERGMVEEGNALAEFDWLHKQGIEIAIDDFGTG 426 Query: 422 HSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQA 481 HSALIYL+RF++DYLKIDRGF+N+IG +T+T+PVLDAV++LAK+L M TVAEGVET EQ Sbjct: 427 HSALIYLQRFSMDYLKIDRGFVNSIGRDTVTAPVLDAVISLAKKLKMQTVAEGVETAEQV 486 Query: 482 RWLSERGVNFMQGYWISRPLPLDDFVRWLKKPY 514 +L E+ VNFMQGY+ S+PL +D+FV + Sbjct: 487 SFLQEQDVNFMQGYYYSKPLSIDNFVAFCNAHT 519 >UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magnetospirillum RepID=A4U4R0_9PROT Length = 840 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 107/491 (21%), Positives = 180/491 (36%), Gaps = 58/491 (11%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDRL--QPLTLDTCQQANPELTARAAFSMNVRTF 96 +V L +L L +R+ Q QA A Sbjct: 393 RDVTERKLAAARIHHLAH-HDSLTGLPNRVLFQERLRTALAQAKRLGHKVALMF------ 445 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 L + + LL Sbjct: 446 --------------------------------------LDLDKFKDINDTLGHHLGDLLL 467 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 K + T ++ E + + S + ++ Sbjct: 468 KAVAKRLLRCVRETDTVARLGGDEFAVVLTNLDDPEGASNVAESIIASISEPFGLDEHEV 527 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMS---GTVVGLLCYYLMSV------RMRPGRE 267 + + ++ DD ++V M +Y+ + R + Sbjct: 528 NTSTSIGITIFPDDAVDSEVLLKNADLAMFRSKAEGRNNYHFYVAEMDAEIQARKVVEHD 587 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A+ +Q + YQP+++ + V G E L+RW+HP G + P FI AE +IVPL Sbjct: 588 LRVALGTDQLEMHYQPLIEMKTGEVVGCEALIRWKHPTRGWVSPVEFIPIAERTDLIVPL 647 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSES-FKADIQKLLTSLPAHHFQIVL 386 + + + + K +N++P + + A I +L Q+ L Sbjct: 648 GRWILHRSCLQGRDWARAGLPPQKIAVNLSPVQFKNHTALLAMIADILDQTGFPPDQLQL 707 Query: 387 EITERDMLKEQEA-TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 EITE ++ EA + L +GV I+IDDFGTG+S+L YL+RF +D LKIDR F+ Sbjct: 708 EITEGIAMQNVEATVDVLRQLRDMGVLISIDDFGTGYSSLNYLKRFPVDKLKIDRSFVVD 767 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 IG + V++A++TL L EGVET EQ +L GV+ QG++ ++ LP D+ Sbjct: 768 IGLHPDNAAVVNAIVTLGHSLGTRVNVEGVETIEQLDFLKAHGVDEAQGFYFAKALPPDE 827 Query: 506 FVRWLKKPYTP 516 F R++++ Sbjct: 828 FARFVREKSPW 838 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 95/425 (22%), Positives = 172/425 (40%), Gaps = 24/425 (5%) Query: 117 LNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT------ 170 L L + ++ A++ + + N + ++ L Sbjct: 627 LTRLPNRNLLRDRLEHALVVAQRHHTGVAVVFLDLDGFKNVNDSLGHSVGDRLLGVVAER 686 Query: 171 --------PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPL 222 ++ E + + +L T+ R+ G + Sbjct: 687 LARCSRTSDTVARHGGDEFVIVMTDTVDEQSLITWMERVRASIAEPVWLDGTELYVGCSM 746 Query: 223 TVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSVRMR------PGREIMTAIK 273 L+ D + M +Y + R + A++ Sbjct: 747 GASLFPQDGDDAETLMKKADVAMYRAKDMGRNTFQFYQPEMNASAGARLNLERRLRRALR 806 Query: 274 REQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFE 333 +F + YQP VD + ++ G+E L+RW P AG +PP +FI AE +I PL++ + Sbjct: 807 DNEFLLHYQPQVDIVSGQIVGIEALVRWHDPEAGLVPPSSFIPLAEESGLIGPLSEWVLR 866 Query: 334 LIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDM 393 R + + +N++ + + ++L + LE+TE + Sbjct: 867 EACRQNKAWQDQGLPPARVSVNLSARVFQQRNIAKLVMQVLAETGLEPRYLELELTESTI 926 Query: 394 LKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETIT 452 ++ +EA + LH++G+ +AIDDFGTG+S+L YL+RF +D LKIDR F++ IG Sbjct: 927 MRNAEEAVLMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGVSGDD 986 Query: 453 SPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 + A++ LA L + +AEGVET Q +L ER + MQG++ ++PL + L Sbjct: 987 ETITSAIIALAHSLKLQVIAEGVETSAQLDFLKERACDEMQGFYFAKPLSTEGISELLHG 1046 Query: 513 PYTPQ 517 P+ Sbjct: 1047 GLVPE 1051 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 96/393 (24%), Positives = 171/393 (43%), Gaps = 10/393 (2%) Query: 131 DMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIG 190 + L ++ + +L+++ + T + E + + Sbjct: 427 SVLFLDIDNFKRINESLGHAAGDAMLRHAAQRLRDCVRPTDVVARYGGDEFTIVLGDLSH 486 Query: 191 NTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS---G 247 + ++ E + + A + V +Y D M Sbjct: 487 VDNIPAILHKVRAAFETPLVISGQEVYASFSVGVSVYPHDGDDGATLLKNADTAMYRSKA 546 Query: 248 TVVGLLCYY--LMSVR----MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRW 301 + +Y M+ R + ++ A+ R +F + YQP +D + R+ G+E LLRW Sbjct: 547 SGRNRYQFYAPEMNARGQELLSLETDLRRALDRGEFRLHYQPQLDLRDNRIAGVEALLRW 606 Query: 302 RHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHL 361 +HP G I P F+ E +IVP+ + + + V+ +N++ Sbjct: 607 KHPRDGVIAPGDFVPLLEDTGLIVPVGEWVLRNACTQYRACRESGVAPVRISVNVSARQF 666 Query: 362 HSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEAT-QLFAWLHSVGVEIAIDDFGT 420 ++ ++++L + LEITE +++ AT + A L ++GV +AIDDFGT Sbjct: 667 REDTLLRQVEQVLREECMPPHHLELEITESTAMQDVAATGDILAALDALGVRLAIDDFGT 726 Query: 421 GHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQ 480 G+S+L YL+RF LD LKID+ FI + + + +A ++L +L + VAEGVET EQ Sbjct: 727 GYSSLAYLKRFPLDALKIDQAFIRDAPRDANIAAIAEASISLGHKLGLEVVAEGVETAEQ 786 Query: 481 ARWLSERGVNFMQGYWISRPLPLDDFVRWLKKP 513 +L R + +QG+ SRPLP D +L + Sbjct: 787 LAFLRRRACDLIQGFHFSRPLPADALTPFLARH 819 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 88/424 (20%), Positives = 169/424 (39%), Gaps = 25/424 (5%) Query: 116 PLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT----- 170 PL L+ + ++ +I + I + N + + L Sbjct: 1043 PLTGLVNRELLMDRLNHSISTADRNNTPLALLFIDLDHFKNVNDTLGHQVGDQLLIEVGQ 1102 Query: 171 ---------PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIP 221 ++ E + G + +++ Sbjct: 1103 RILKILRDEDTIARQGGDEFIVVLPD-TGENGAVHVAEKILESISDQLNLKPYKLFITPS 1161 Query: 222 LTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSVR------MRPGREIMTAI 272 + + +Y D D M + ++ M ++ M+ + A+ Sbjct: 1162 IGIAVYPQDGKDADSLLKNADTAMYQAKNDGRNVYRFFTMEMQAHSSRIMQIESALRVAL 1221 Query: 273 KREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLF 332 +QF + YQP ++ + G+E L+RW HP G + P FI AE I+ + + Sbjct: 1222 FDQQFELYYQPQTCAKSGSIIGVEALIRWNHPEMGPVSPQEFIPVAEQSGQILAIGWWVL 1281 Query: 333 ELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERD 392 R + +K +N++ E + K+L + LE+TE Sbjct: 1282 RTAIRQIKIWSEHGKPCIKVAVNLSAVQFRYEDLPKQVMKILEEEGVSPEFLELELTESV 1341 Query: 393 MLKEQEA-TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETI 451 + EA ++ L G++++IDDFGTG+S+L YL+RF + LKID+ FI + ++ Sbjct: 1342 AMANPEAVIEMMDKLVGHGIKMSIDDFGTGYSSLSYLKRFKVSKLKIDQSFIRDLAVDSD 1401 Query: 452 TSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 +++A+++L+K L + T+AEGVET Q +L E+ + +QG++ S+ L + F + + Sbjct: 1402 DRSIIEAIISLSKALGLKTIAEGVETQAQLDFLQEKQCDEIQGFYYSKALTPEAFDAFYE 1461 Query: 512 KPYT 515 K Sbjct: 1462 KQSQ 1465 >UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=C7QU83_CYAP0 Length = 1514 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 109/428 (25%), Positives = 171/428 (39%), Gaps = 24/428 (5%) Query: 114 DIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSL 173 L +L L + +D +I T + I N + A L L Sbjct: 1085 HDHLTDLPNRLLLKARLDQSIQQATRKRTKLAVVFIDLDRFKHINDSMGHAAGDALLQQL 1144 Query: 174 F--------------YSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAG 219 S E + I S ++LM V E + Sbjct: 1145 AQRLRQVLRSSDTVARISGDEFVAVLEDIEDIQHASMVVAKLMTVFEEPFPLEGQIIHMT 1204 Query: 220 IPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSVRMR------PGREIMT 270 + + L+ DD + M C+Y + + Sbjct: 1205 SSMGLSLFPDDGMDTAILLRNADSAMYRAKEEGRNTYCFYAEEMTSAAFEYVLFENALRG 1264 Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 A+KR +FY+ YQP +D + R G+EVLLRW HP G + P FI AE +I + Sbjct: 1265 ALKRNEFYLVYQPQIDLSSHRWVGMEVLLRWHHPELGIVSPAQFIPIAEQSGLIQEIGTW 1324 Query: 331 LFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITE 390 + A +N+A + +F +Q L S + LE+TE Sbjct: 1325 VLYRACCQAKTWLDQGIDFGHIAVNVAAPQIQQNNFVHLVQDALDSSGLPSPHLELELTE 1384 Query: 391 RDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTE 449 ++ + E + L +G+ +AIDDFGTG+S+L YL+R ++ LKID+ F+ I + Sbjct: 1385 GLVMHQTEDRIKQLEVLQDMGIYLAIDDFGTGYSSLSYLKRLPINKLKIDKSFVRDIPHD 1444 Query: 450 TITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRW 509 T + +AV+ L K LN+ +AEGVE QA +L E+G + QGY S+PLP ++ + Sbjct: 1445 TNDMAISEAVIALGKALNLRIIAEGVEQEIQATFLREKGCHEAQGYLYSKPLPPEEITQL 1504 Query: 510 LKKPYTPQ 517 + Q Sbjct: 1505 FAEVSQWQ 1512 >UniRef50_C0QA93 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QA93_DESAH Length = 629 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 96/491 (19%), Positives = 180/491 (36%), Gaps = 48/491 (9%) Query: 37 HKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPL--TLDTCQQANPELTARAAFSMNVR 94 + + + I L ++ L +R + T +A+ A +++ Sbjct: 158 LTRKWELNNEIQGRLNQLA-FYDSLTGLPNRTLFIENLTTTLDKAHRYKHKAALLYIDLD 216 Query: 95 TFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNP 154 F + D T S ++ ++ + + + ++ P MV Sbjct: 217 NFKRIND--TLGHSIGDDLLKATSKRLLKC-LRTSDTVSRSPAGEMV------------- 260 Query: 155 LLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRE 214 E + + + R+ Sbjct: 261 -------------------ARLGGDEFTVILPEVTRAEHAGVVALRIAKQLAEPLHLGNH 301 Query: 215 TKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVV---GLLCYYLMSV------RMRPG 265 I + + L+ D + M + + +Y S+ RM Sbjct: 302 QVIVTPSIGISLFPQDGEDIETLLKNADIAMYFSKRMGPNMFSFYEQSMNADALKRMTIE 361 Query: 266 REIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIV 325 + A+ R +F + YQP D V G E LLRW + G +PP FI+ AE MIV Sbjct: 362 NHLRQALGRGEFALHYQPQFDLVTGEVCGAEALLRWHNWELGNVPPIEFISIAEENGMIV 421 Query: 326 PLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIV 385 + + + R + +N++ + F ++ +L + Sbjct: 422 AIGEWVMRTACRQTRTWLDQGLPLQRIAVNVSVNQFTHTDFLNMVKSILEETTLDPQYLE 481 Query: 386 LEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFIN 444 +EITE ++K E T + L + + IAIDDFGTG+S++ L+ +D LKID+ F++ Sbjct: 482 IEITESLLVKNVPETTNILHALKKMNIRIAIDDFGTGYSSMSRLKEIPIDCLKIDKTFVD 541 Query: 445 AIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLD 504 I ++ A++ +A+ +N+ +AEGVET Q +L + +QGY S+PL Sbjct: 542 GIAIGKRDQSIITAIIAMAEGMNLRLIAEGVETTGQVDFLRVKQCQEVQGYLFSKPLSTQ 601 Query: 505 DFVRWLKKPYT 515 + +K ++ Sbjct: 602 QVEVFFQKAFS 612 >UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47AR1_DECAR Length = 655 Score = 493 bits (1271), Expect = e-138, Method: Composition-based stats. Identities = 108/428 (25%), Positives = 175/428 (40%), Gaps = 27/428 (6%) Query: 112 EMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTP 171 PL L L ++ ++D + TP + ++I N N + L Sbjct: 223 ARHDPLTNLPNRLALDAHLDTLLEGATPGINRLALLIIDLDNFKTINDSLGHHAGDRLLS 282 Query: 172 SLFYS--------------SRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 L E V +I A+ +L Sbjct: 283 ELARRLGAQMDLTKRLFRLGGDEFVVVVDQLINEEAVIELVQQLAGGIGDPCNIDGHVLH 342 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLL---------CYYLMSVRMRPGREI 268 + + LY +D M + R+ E+ Sbjct: 343 CTSSIGISLYPEDGRDAQALIRNADTAMYYAKANGRNNHKFFTEPMNAAANKRLHLESEL 402 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A+ Q + YQP +D + +V G+E L+RWRHP+ G IPP FI AE +I+PL Sbjct: 403 WCALAENQLVLYYQPQIDLLSGKVVGVEALVRWRHPLRGLIPPAEFIPVAEECGLILPLG 462 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + R A E + +NI+ F + +Q +L ++ LEI Sbjct: 463 HWVLLTACRQAREWLDAGIDMGEMAVNISAHQFRQPEFISSVQAILAETGLPTGRLELEI 522 Query: 389 TERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE ++ E + A Q A L ++G+++AIDDFGTG+S+L YL RF LD LKIDR F+ + Sbjct: 523 TESTIMHEVDAAIQTLAQLRAMGIKLAIDDFGTGYSSLAYLRRFPLDRLKIDRSFLADVE 582 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 T+ + ++ +++ L + L + VAEGVE QA +L +QG+ +P+ ++ V Sbjct: 583 TDPDAASLVTSIVLLGRSLGLQLVAEGVENFAQAEFLRTLECERVQGFHFYQPVCAEEVV 642 Query: 508 ---RWLKK 512 R+L+ Sbjct: 643 GVGRFLEN 650 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 493 bits (1270), Expect = e-138, Method: Composition-based stats. Identities = 104/463 (22%), Positives = 177/463 (38%), Gaps = 56/463 (12%) Query: 58 FADLKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPL 117 F L +R L + N E A ++ F + D + Sbjct: 664 FDPLTGLPNRSL-LFDRLQEVLNREPHNGAVLFCDLDRFKNINDS--LGHTL-------- 712 Query: 118 NELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSS 177 G ++ ++ P ++ Sbjct: 713 -------------------GDAVLKEVARRLVARVRPG---------------DTVCRYG 738 Query: 178 RQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVW 237 E + + L + +L+ + L V ++ D D Sbjct: 739 GDEFVLVLPGLSDCVVLEQLAEQLLADVSSPILLDGLDLRVTPSLGVAVFPRDGNDCDAL 798 Query: 238 YAFLLGGMSGTV-VGLLCYYLMSVR--------MRPGREIMTAIKREQFYVAYQPVVDTQ 288 + G Y + + + +A++R +F + YQP VD Sbjct: 799 LRHADAALYHAKSRGRNTYRFFTREIDDRVSEYLHIEHGLRSALERGEFELHYQPQVDMA 858 Query: 289 ALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPV 348 RV G+E LLRW+HP G I P F+ AE +IVP+ + R A + Sbjct: 859 FGRVVGVEALLRWKHPEQGMISPVRFVPIAEETGLIVPIGMWVIREACRQAMLWRRAGLR 918 Query: 349 GVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKE-QEATQLFAWLH 407 + +N++ S I + L + +E+TE ++++ QEA + L Sbjct: 919 PMTMAVNLSGRQFSR-SVIEAIDEALADSGLDPRWLQVEVTESVIMEDTQEAYTVLEALR 977 Query: 408 SVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLN 467 + G+ +A+DDFGTG+S+L YL+RF +D LKIDR FI I + ++DA++ +A L Sbjct: 978 ARGLTVAVDDFGTGYSSLAYLKRFPIDKLKIDRSFIRDIDLDEDNPVIVDAIIGMAHNLR 1037 Query: 468 MLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 + +AEGVET Q +L ++G + +QGY +SRP P +W+ Sbjct: 1038 IKVLAEGVETRAQWDYLRQQGCDEVQGYLVSRPQPAAALGQWM 1080 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 493 bits (1270), Expect = e-138, Method: Composition-based stats. Identities = 93/484 (19%), Positives = 170/484 (35%), Gaps = 57/484 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDRL--QPLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ ++L L +RL Q +A T A +++ Sbjct: 427 DITDRKESEARIRHLAH-HDALTGLPNRLLLQDRLGQAILKARRNSTQAAVLFLDL---- 481 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 + + LL+ Sbjct: 482 ----------------------------------------DRFKTINDTLGHEIGDGLLR 501 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 + T ++ E + + T + +++ Sbjct: 502 QVTQRCLGAVRETDTVARQGGDEFVIVLPDLEHGQDAGTIARKILAALTEPCRLGPHELT 561 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSVR------MRPGREI 268 + + LY D + M +Y + + ++ Sbjct: 562 VTGSIGIALYPGDGADPSMLLRNADAAMYRAKADGRNGFQFYAADMNTHSLGELLLEHQL 621 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A+ R + + +QP V+ + G E LLRW+HP G + P F+ AE +IVP+ Sbjct: 622 RGALDRNELRLYFQPKVNAADGCIEGCEALLRWQHPDLGLLAPGRFVPAAEESGLIVPIG 681 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + R V +N++ + A +++ L + LE+ Sbjct: 682 EWVLREACRQLRAWIDAGLAPVPVAVNLSGQQFAHQDIVALVREALAEHRLPAPMLELEL 741 Query: 389 TERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE ++++ E A L ++GV +AIDDFGTG+S+L YL +F ++ LKIDR F++ I Sbjct: 742 TETMLMRDLERTIATLAELRAMGVTLAIDDFGTGYSSLAYLRQFDVNALKIDRSFVHDIR 801 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + + AV+ LA L + AEGVET Q +L+ G + +QG+ +P P + F Sbjct: 802 PGSSDGKIATAVIALAHNLGLTVTAEGVETAAQQHFLARHGCDQLQGFLFGQPEPAEAFA 861 Query: 508 RWLK 511 + L Sbjct: 862 QRLA 865 >UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF sensor n=3 Tax=Cyanobacteria RepID=B7KHV9_CYAP7 Length = 1262 Score = 493 bits (1269), Expect = e-138, Method: Composition-based stats. Identities = 96/426 (22%), Positives = 170/426 (39%), Gaps = 27/426 (6%) Query: 117 LNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT------ 170 + +L + N + +A++ +++ N + + L Sbjct: 419 ITQLPNGIIFNHRLSLALVDAVNQGNMLGVVILDLNQFKRINDSLGHGVGDFLLTKVRDR 478 Query: 171 ------------PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIA 218 P L ++ + + +L+N + + Sbjct: 479 LQNALDTYSIFNPLLARWHGARFIILLSKLSYSDESVMVCQKLLNDFQEPFYVQSQAIYL 538 Query: 219 GIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMS-------VRMRPGREIMT 270 G L + L D ++ M G Y + ++ ++ Sbjct: 539 GASLGIALAPYDGDTAEILLKNAESAMYEAKKQGKNTYQIYRPGSDHDKNKLILEADLRK 598 Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 AI+R +F + YQP +D ++ G+E L+RW+HP G + P FI AE +I PL + Sbjct: 599 AIERNEFVLHYQPQIDLNTRKLIGVEALIRWQHPSLGMVSPALFIPLAEETGLICPLGEW 658 Query: 331 LFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITE 390 + +K ++ +N++ L + A I +L + LEITE Sbjct: 659 VLRTACHQYRIWQKAGFPKIQMAVNLSAFQLQQDDIVARIAMILKETGMTPSDLELEITE 718 Query: 391 RDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTE 449 +++ E T + L +G++IAIDDFGTG+S+L L+ +D LKID+ F+ I + Sbjct: 719 TTVMENLEQMTAILEQLKQMGIKIAIDDFGTGYSSLNVLKHLPVDTLKIDKSFVQDITLD 778 Query: 450 TITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRW 509 + + + ++ L K + +AEGVET Q +L + QGY ISRPL D + Sbjct: 779 SNDAKLCQGIIMLGKAFELDVLAEGVETFTQLEFLRSLNCDRAQGYLISRPLAPDALIEL 838 Query: 510 LKKPYT 515 L K T Sbjct: 839 LLKAQT 844 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 493 bits (1269), Expect = e-138, Method: Composition-based stats. Identities = 108/487 (22%), Positives = 192/487 (39%), Gaps = 57/487 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ +++ Y L +R+ +QA + A +++ F Sbjct: 185 DISERKEQEARVQHMAEY-DALTDLPNRVLVNDRLHQAIRQAELQHNQLAVLFVDLDHFK 243 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 + D T A E+ + + Sbjct: 244 NIND--TLGHCAGDELLKEVARRLAGAVRG------------------------------ 271 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 ++ + E + I + + R++ + + + Sbjct: 272 ------------LDTVGRTGGDEFVLILPSINQPGEAAQIAERILRTIQQPFQIGEHSLV 319 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYL------MSVRMRPGREI 268 G + + L DD + M +Y ++ R+ + Sbjct: 320 VGCSIGISLMPDDGSDIQTLLMNADLAMYHAKAHGRNTFRFYTREMNTQVAERLLMENRL 379 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A+++EQ Y+ YQP D R+ G E LLRWR P G I P FI AE +IVPL Sbjct: 380 RRAMEQEQLYLVYQPQYDMAGQRLLGCEALLRWRDPDEGLIMPGRFIPVAEDTGLIVPLG 439 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + + R A+ + ++ +N++ L F D+++ L + LE+ Sbjct: 440 RWVLDQACRQASLWLRAGLEPMRVAVNVSAHQLMRHDFIDDVREALQRHALPGHCLELEV 499 Query: 389 TERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE ++ + + A++ A + ++GV +AIDDFGTG+S+L YL+RF D +KIDR FI+ + Sbjct: 500 TESTLMADADLASRQLAVIKAMGVRLAIDDFGTGYSSLAYLKRFAPDLVKIDRSFISDLP 559 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + + ++ A++ LA L M T+AEGVE Q R+L G MQGY + PL + Sbjct: 560 GDEENAAIVSAIVHLAGALGMETLAEGVENENQQRFLQTLGCEAMQGYLLGSPLAEEMMT 619 Query: 508 RWLKKPY 514 R L++ Sbjct: 620 RRLEQQQ 626 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 493 bits (1269), Expect = e-138, Method: Composition-based stats. Identities = 94/416 (22%), Positives = 171/416 (41%), Gaps = 14/416 (3%) Query: 107 SSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALN 166 S+ G +D L V + L + + LL + Sbjct: 983 SNLQGRLDQALASARREGHGRS-VAVMFLDLDRFKNINDTLGHHVGDALLLEVAARLRSS 1041 Query: 167 LNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRL 226 + + + E + A + +++ + + + + Sbjct: 1042 VRDSDVVARLGGDEFVVVLTGADA-LAAERVAGKILKALSRAYQIEGHALHSTSSIGIAV 1100 Query: 227 YADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSV------RMRPGREIMTAIKREQF 277 + D +V M + ++ S+ R + ++ A++++QF Sbjct: 1101 FPADGESVEVLMQNADAAMYHAKSAGRNNVQFFTASMNEAASDRRQLEEDLHLALQQKQF 1160 Query: 278 YVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIAR 337 + YQP VD Q RV +E LLRW+HP G +PP F+ AE +IVP+ Q + E Sbjct: 1161 VLHYQPQVDAQ-RRVFAVEALLRWQHPHHGLVPPARFVPLAEDTGLIVPIGQWVLETACA 1219 Query: 338 DAAELE-KVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKE 396 ++ +N++ F +++ + + A+ ++ LE+TE +L Sbjct: 1220 QIKAWSVDARTRKLQVAVNVSARQFRQPDFVELLRQAIDNSGANPARLKLELTESLVLDN 1279 Query: 397 -QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPV 455 + + +GV ++DDFGTG+S+L YL R LD LKIDR F+ + + + Sbjct: 1280 VADTIDKMNAIKLLGVTFSMDDFGTGYSSLSYLTRLPLDQLKIDRAFVCRLPENRSDAVI 1339 Query: 456 LDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 ++T+ + L + VAEGVET Q ++L G + QG+ SRPL +D F +L+ Sbjct: 1340 AQTIVTMGRSLGLKVVAEGVETEAQRQFLDSHGCDGYQGFLFSRPLAVDAFEDFLQ 1395 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats. Identities = 98/483 (20%), Positives = 189/483 (39%), Gaps = 57/483 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ + + L Y+ L +R + + + F +++ F Sbjct: 823 DITQQKETEEQLEKLA-YYDPLTELPNRALFRDRLEQEMRLSARGGKSLGLFFIDLDRFK 881 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 V D ++ I + I + + +A L G P I Sbjct: 882 YVNDS--LGHDKGDDLLIQVAGRIKH-HLRTSDTVARLGGDEFTVILPGIEQT------- 931 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 ++ + ++ + Sbjct: 932 ----------------------------------NDVARIAGAIVKSLGEVFVLQGHEVF 957 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSV------RMRPGREI 268 G + + ++ DD + M G ++ + R+ R + Sbjct: 958 IGGSIGIAMHPDDGEDYETLTKHADTAMYRAKEEGRGTYKFFTSDMNEINGRRLSLERAL 1017 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A++ Q + YQP VD + R+TG+E L+RW HP G + P FI AE +I+ + Sbjct: 1018 RQAVECNQLTLHYQPKVDVKQCRITGMEALVRWNHPEQGLVSPVDFIPIAEETGLIITIG 1077 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + + DA L + ++ IN++ A +++ L + +EI Sbjct: 1078 EWVMQQACMDAKRLARSSRHPLQVAINLSAKQFQDALLVAKLERSLQQSGLAPELLEVEI 1137 Query: 389 TERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE + + + L ++GV+++IDDFGTG+S+L YL++ L+ LKID+ FI + Sbjct: 1138 TESLAMGDVNRTIEQIGELRALGVKVSIDDFGTGYSSLSYLKKLPLNALKIDKSFIQDLY 1197 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 ++ + ++ ++L++A L + VAEGVE Q +L E+ +QGY+ S+PLP + F Sbjct: 1198 LDSDDTAIVSSILSMASALGLSVVAEGVENQAQIHFLCEKECPTIQGYFFSKPLPFEAFE 1257 Query: 508 RWL 510 ++L Sbjct: 1258 KFL 1260 >UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SC6_GEOMG Length = 821 Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats. Identities = 112/493 (22%), Positives = 194/493 (39%), Gaps = 21/493 (4%) Query: 41 VKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVK 100 V+ T V + ++ D + + RL + T ++ + Sbjct: 323 VEAMTTGRAVSREVERILDDGEPSGLRLSAF---PVFNEQGKATKFIKVVEDITDRKRAE 379 Query: 101 DKK---TFCSSATGEMDIPL------NELIPALDINKNVDMAILPGTPMVPNKPAIVIWY 151 +K + S TG + PL + A + V + L + Sbjct: 380 EKIRRLAYYDSLTGLPNRPLMMDRLSQAIRHARRHGEVVALLFLDLDRFKDVNDSQGHRV 439 Query: 152 RNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMP 211 + LL+ + + +L E + T S + +++ Sbjct: 440 GDRLLQEVAARLSGCTRESDTLARLGGDEFVIIAPGVRAATDASLLADKILAALAEPFTL 499 Query: 212 VRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV-VGLLCYYLMS--------VRM 262 R+T + + L+ D ++ M G Y S R Sbjct: 500 DRQTLHIATSIGIVLFPSDGGNGEMLLQRADMAMYAAKDRGGNSYRFFSAEMNTRAVERH 559 Query: 263 RPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQK 322 ++ A+ +F++ YQP V+T +V G+E L+RW HP G I P FI AE Sbjct: 560 ELEEDMRQALTNGEFFLMYQPQVNTGTWKVVGVEALVRWNHPRKGVILPSRFIPVAEETG 619 Query: 323 MIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHF 382 I L + + E R A+ + ++ G+N+ E + +L Sbjct: 620 FISKLGRWVLEEACRQGAQWQHDGLPPLQMGVNLCARQFTHEEIVGTVSDVLQKTGLPSE 679 Query: 383 QIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGF 442 + +E+TE ++ + A L ++GV +AIDDFGTG+S+ YL+ F LD +KID+ F Sbjct: 680 LLEIELTETMLMDSETAVSTLGQLKALGVRLAIDDFGTGYSSFNYLKHFPLDRIKIDQSF 739 Query: 443 INAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 I IG +++A++ +A+ L +AEGVET EQ R+L +QG++ SRPL Sbjct: 740 IRDIGQSRGNGAIIEAIVAVARSLGPEVLAEGVETEEQLRYLMSITCADIQGFYFSRPLL 799 Query: 503 LDDFVRWLKKPYT 515 DD R +++ Sbjct: 800 PDDVSRLIRESLP 812 >UniRef50_B9M6C9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9M6C9_GEOSF Length = 845 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 91/484 (18%), Positives = 174/484 (35%), Gaps = 57/484 (11%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTF 96 +V + D +Y T L +R+ + Q + +A +++ F Sbjct: 406 RDVTESKKMEDEIRYQAT-HDILTGLANRMLFMDHLALSISQGHRYNEIQAVMFLDLDRF 464 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 + D +A ++ ++ + Sbjct: 465 KSINDS--LGHAAGDKLLQLISGRLKEC-------------------------------- 490 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 + T ++ E + + + ++++++ Sbjct: 491 ----------VRETDTVARIGGDEYNILITQMAHPEDATAIANKILSSMNKPFAIDGHQL 540 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV-VGLLCYYLMS--------VRMRPGRE 267 I + + LY D + + G Y + R++ Sbjct: 541 HVTISIGISLYPTDGEDAETLLKNADIALYHAKEQGRNNYQFYNPALNTRTLERVKMENR 600 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A++R + V YQP V +VTG E L+ W HP G + P FI AE I + Sbjct: 601 LRQALERHELVVLYQPQVAMDTGQVTGAEALVYWLHPELGLLSPGHFIPMAEEIGFITDI 660 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + + E + +N++ ++++L + + LE Sbjct: 661 DEWVLETACAQNKAWQDEGYRSFNVTVNMSSKQFRRPDLVDQVRRVLNATGLPPRFLELE 720 Query: 388 ITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 ITE +K+ E L + V AIDDFGTG+S+L L++ + LKID+ FI + Sbjct: 721 ITEGTAMKDIEYTIPSLNTLTGMEVGFAIDDFGTGYSSLSCLKKLPIRKLKIDKSFIFGV 780 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 T+ ++ ++ +A L + +AEGVE +Q +L + + MQG+ SRP+P +DF Sbjct: 781 NTDPNDKAIVATIIAMAHNLKLEVIAEGVEDADQLEFLHQNHCDQMQGFLYSRPIPAEDF 840 Query: 507 VRWL 510 R + Sbjct: 841 RRLI 844 >UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=3 Tax=Geobacter RepID=C6E7Z7_GEOSM Length = 721 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 108/511 (21%), Positives = 193/511 (37%), Gaps = 64/511 (12%) Query: 26 LVSCLQFLVAWHKHEVKYDTLITDVQKYLDTY--FADLKSTTDRLQ--PLTLDTCQQANP 81 + + + ++ Q +L + L +R QA Sbjct: 240 IGLLYDGFNEMLSEIEERNQILRQRQAHLQQLAHYDPLTRLPNRTLFYDRLAQALNQAER 299 Query: 82 ELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMV 141 A + +++ F + D T + I + + + Sbjct: 300 NRQALSVIFIDLDHFKDIND--TLGHRTGDLLLIDVANRLSTV----------------- 340 Query: 142 PNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRL 201 + ++ E ++ + +++L Sbjct: 341 -------------------------VRSCDTVARLGGDEFTVFTQNVMNADNAAIVAAKL 375 Query: 202 MNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLM--- 258 + + V L+ +D D M Y M Sbjct: 376 NALFAKPFQLGESEIYVTASIGVTLFPNDGKTVDELLMNADIAMYHAKACGKNVYKMFDR 435 Query: 259 ------SVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPD 312 + R+ ++ A++RE+F + YQP VD VT +E L+RW HP G + PD Sbjct: 436 KMNEHANERVTLLSDLRLALEREEFVLHYQPKVDLLTGNVTSVEALVRWMHPRLGMLAPD 495 Query: 313 AFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQK 372 FI +E IV LT + A + ++ V+ +N++P H + K I Sbjct: 496 KFIRLSEESGFIVELTDWVLRTACTQAKKWQEQNLGSVRVAVNLSPYHFQRQDVKEAIFS 555 Query: 373 LLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERF 431 +L + + +EITE +++ E LF L +G+ I++DDFGTG+S+L YL RF Sbjct: 556 VLDATGLEPALLEIEITESALMQNDEYTCALFRELRELGMTISVDDFGTGYSSLSYLHRF 615 Query: 432 TLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNF 491 ++ LKIDR FI + + ++ A++ +AK LNM VAEGVET +Q L ++G + Sbjct: 616 PINTLKIDRTFILNMMKSSEDQAIVTAIIAMAKSLNMQIVAEGVETVDQLEKLKDQGCHE 675 Query: 492 MQGYWISRPLPLDDFVRW------LKKPYTP 516 +QG+ +SRP+ + ++ L + P Sbjct: 676 IQGFLVSRPVAAESVTQFFTPENHLHQHTAP 706 >UniRef50_Q74EC6 Sensory box/response regulator n=1 Tax=Geobacter sulfurreducens RepID=Q74EC6_GEOSL Length = 799 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 103/501 (20%), Positives = 191/501 (38%), Gaps = 45/501 (8%) Query: 26 LVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQP--LTLDTCQQANPEL 83 +V+ V +V ++ +YL L +R+ + +A + Sbjct: 319 IVANGTGTVLAIVRDVTERRQSEEMIRYLAH-HDSLTGLPNRIFFGEMLELVLSRARRDG 377 Query: 84 TARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPN 143 A +++ F L+ D T +A + + + + + Sbjct: 378 KQVAILFVDLDDFKLIND--TLGHAAGDHLLREAAQRLKGCVRSSDY------------- 422 Query: 144 KPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMN 203 V + L ++ E + + + + R+++ Sbjct: 423 -----------------VASGAESGLCGNIARFGGDEFILSLGNLDSVDDVVAVTQRIIS 465 Query: 204 VNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV-----VGLLCYYLM 258 + + + +Y DD M M Sbjct: 466 EFSREFRIDGHEIFVSVSIGISMYPDDAEDTGSLVRNADMAMFAAKEEGGPSFRFFTRGM 525 Query: 259 SV----RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAF 314 + R+ + A++R + +V YQP VD +TG E L RW HP G IPPD F Sbjct: 526 NEAAQQRLSIELSLRKALERGEIFVHYQPKVDLSCGEITGFEALARWHHPELGLIPPDTF 585 Query: 315 INFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLL 374 I AE +IV + + + A + IN++ S + + ++++L Sbjct: 586 IPLAEKNGLIVRIGEWVLRAACAQARTWIDEGFSDLCMAINLSSHQFTSGNLTSMVKEVL 645 Query: 375 TSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTL 433 + EITE +++ E ++ + L +GV I+IDDFGTG+S+L YL+RF + Sbjct: 646 DETELPPSCLEFEITEGILMERTEKTMRILSELRDMGVRISIDDFGTGYSSLGYLKRFPV 705 Query: 434 DYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQ 493 + +KIDR F+ I + + ++ A++ +A+ LN+ VAEGVE+ Q +L G N Q Sbjct: 706 NTVKIDRSFVREIDSPHEDAAIIKAIIAVARNLNLQVVAEGVESHRQTEFLLAHGCNEAQ 765 Query: 494 GYWISRPLPLDDFVRWLKKPY 514 G+ +P+ D+ L+ Sbjct: 766 GFLFGKPVHPDEASLMLRAGR 786 >UniRef50_A1ALB3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Desulfuromonadales RepID=A1ALB3_PELPD Length = 705 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 101/430 (23%), Positives = 172/430 (40%), Gaps = 11/430 (2%) Query: 97 VLVKDKKTFCSSATGEMDIPLNELI-PALDINKNVDMAILPGTPMVPNKPAIVIWYRNPL 155 L+ + L + I A V + L + + L Sbjct: 275 HLINYDTLTGLPNRSLLHDRLRQAIAQAAQDRHMVWVLCLDLDRFKGVNDTLGHRSGDKL 334 Query: 156 LKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRET 215 L+ A + + +L E + ++ S + +++ + Sbjct: 335 LQEVARRLAACVRESDTLARLGGDEFVVVLDGVVSEKGASIVAKKILTLIAEPIPIDDHE 394 Query: 216 KIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSV------RMRPGR 266 + + Y D M ++ + RM Sbjct: 395 LYTTASIGIAAYPMDGEDGHTLLKHADLAMYKAKELDRNNFHFFSHDMNIKVMERMMLEN 454 Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 + A++R++F++ YQP VD ++ R+TG+E LLRW HP G + PD FI AE IVP Sbjct: 455 SMRKALERDEFFLVYQPQVDARSGRITGVEALLRWNHPDMGLLTPDRFIYLAEETGFIVP 514 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 L + + R +K+ ++ +N++ I +L + L Sbjct: 515 LGEWVLMTACRQNRAWQKLGFPPLRVAVNLSGKQFGQHRLDEMISAILLETGLEPEWLEL 574 Query: 387 EITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 EITE +++ + + L G+ +AIDDFGTG+S+L YL+ F + LKID+ F+ Sbjct: 575 EITESAIMRNADQNIAILRSLKEKGISLAIDDFGTGYSSLSYLKHFPITRLKIDKTFVQD 634 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 I T + + + ++ +A+ L + +AEGVET Q +LS MQGY SRPL D Sbjct: 635 ITTNPDDAAIAEIIIAMAQTLKLNVIAEGVETRAQMEFLSTHTCFEMQGYLFSRPLTTDK 694 Query: 506 FVRWLKKPYT 515 FV L+ + Sbjct: 695 FVYLLRDGIS 704 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 100/499 (20%), Positives = 190/499 (38%), Gaps = 59/499 (11%) Query: 29 CLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTAR 86 + +A ++ + + L +RL + A E Sbjct: 348 VVTHFMAVKENITQRKETEQQLVHQATH--DTLTGLPNRLLLEDRVHHAIEVAKREGRRI 405 Query: 87 AAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPA 146 +++ F +V D A EL+ + + Sbjct: 406 GLMFLDLDRFKIVNDS--LGHVAGD-------ELLKVVSDRLRHTLRR------------ 444 Query: 147 IVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNE 206 + ++ E + T L+ + ++ + Sbjct: 445 -----------------------SDTVARLGGDEFVVVLTHFQSTTELAEVAEKISAALD 481 Query: 207 LTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS---GTVVGLLCYYLMSV--- 260 G + + +Y DD + M C+Y ++ Sbjct: 482 EPVELSGHKVHVGASIGIAIYPDDGDNFNALMKDADTAMYRAKQKGRNTFCFYDSNMNDE 541 Query: 261 ---RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 R++ + A+ R +F + YQP VD Q R +G+E L+RW P G++ P FI Sbjct: 542 ALDRLKLEEALRRALVRGEFQLFYQPQVDLQTGRTSGVEALIRWNSPERGQVSPALFIPV 601 Query: 318 AESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSL 377 AE +I + + E R A + G+K +N++ + + I L+ Sbjct: 602 AEESNLISMIGWWVLEESCRQIAAWREAGLTGIKVAVNVSGRQFLNHALVECISDLMAQY 661 Query: 378 PAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYL 436 Q+ +E+TE ++ E + A + L +G+++++DDFGTG+S+L YL+R L + Sbjct: 662 AVLPSQLEIELTESTVMAEPDRAIEQLTRLREIGIQVSVDDFGTGYSSLSYLKRLPLSTI 721 Query: 437 KIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYW 496 K+DR F+ + ++ + ++ A+L LA L+M VAEGVET + + L + G +QG+ Sbjct: 722 KVDRSFVRDVNNQSDNAAIVSAILGLADALDMSIVAEGVETEGEEQHLKDAGCIKVQGFR 781 Query: 497 ISRPLPLDDFVRW-LKKPY 514 ++P+P D W L++ Sbjct: 782 YAKPMPADQLAAWMLRQGR 800 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 491 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 103/485 (21%), Positives = 175/485 (36%), Gaps = 58/485 (11%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTF 96 ++ + + L F L +R L T Q A +++ F Sbjct: 540 RDISLQREAQERIQRLAH-FDPLTDLPNRVLLAERTQRQIAQEQARGGQLALLFLDLDHF 598 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 V D + + + + +L + Sbjct: 599 KNVNDS--LGHRIGDILLVAVARRLQSLIGPQ---------------------------- 628 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 ++ E + + +S L+ Sbjct: 629 --------------DTVSRLGGDEFLLLLPA-TSAAHAAKVASALLTAVAQPFQIDPYEL 673 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMS-----GTVVGLLCYYLMSVR----MRPGRE 267 + + + + D D Y M G + R ++ Sbjct: 674 STTLSVGIAMCPADGESFDTLYQRADAAMYSAKQSGRNRYGFFTADLQARTARALQIENA 733 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A++R+QF + YQP V +V G E LLRW HP G + P FI AE+ IV L Sbjct: 734 LRRALERQQFELHYQPQVSLGTGQVVGAEALLRWHHPELGVVAPAEFIPVAENSGQIVAL 793 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + + ARDA + +N++ + + L ++ LE Sbjct: 794 GEWVLHTAARDAKRWLDMQLPLRAVSVNLSAVQFRHPQLPEMVTRCLQQAGLPARRLELE 853 Query: 388 ITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE + + A + LH GV +++DDFGTG+S+L L+RF + LKID+ F+ + Sbjct: 854 LTEGAAVDDPVAALAMMDQLHDRGVRLSMDDFGTGYSSLSCLKRFQIYKLKIDQSFVRDL 913 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 + ++ A++ +A+ L M T AEGVET Q ++L +G + QGY SRPLP D F Sbjct: 914 DDDANDRAIVSAIIRMAQALGMQTTAEGVETDGQLQFLRAQGCDEGQGYLFSRPLPADAF 973 Query: 507 VRWLK 511 +L+ Sbjct: 974 EAYLR 978 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 96/497 (19%), Positives = 192/497 (38%), Gaps = 54/497 (10%) Query: 29 CLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTAR 86 + ++ ++ F L + +R Sbjct: 586 GSIYRHVGQFSDITEKKRKDELIWEQAN-FDTLTNLPNRRLFADRFRQAISAGARSGRYG 644 Query: 87 AAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPA 146 A S+++ F + D TF S ++ I + + + + + +A + G Sbjct: 645 ALLSLDLDQFKRLND--TFGHSMGDKLLIEVARRLTSC-VREEDTVARMGGDEF-----L 696 Query: 147 IVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNE 206 +++ + + A + ++ N Sbjct: 697 VILNGLGSEQNEAAIRA-------------------------------ELIAEKIRNELC 725 Query: 207 LTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS---GTVVGLLCYYLMSV--- 260 + + + + L+ + A + M +C++ S+ Sbjct: 726 RPYQLDKTEHHSSSSIGIVLFRGHSDDPERLLAHVDTAMYQSKAKGRNAICFFDSSMQEI 785 Query: 261 ---RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 R + + A++R++F + YQ +D + R G E LLRW + G + P FI Sbjct: 786 LEKRGQLETALRGALERKEFLLHYQLQMD-SSGRPIGAEALLRWNNAKLGSVSPVQFIPV 844 Query: 318 AESQKMIVPLTQHLFELIARDAAELE-KVLPVGVKFGINIAPDHLHSESFKADIQKLLTS 376 AE +I+P+ + E A + + +N++ +F A ++ +L Sbjct: 845 AEESGLILPIGHWVLETACAQLARWQSDPRFNRLCIAVNVSAIQFREAAFVAKVRNVLQQ 904 Query: 377 LPAHHFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDY 435 + + LE+TE +L + ++ L ++GV+ ++DDFGTG+S+L YL R LD Sbjct: 905 SGIQPWLLKLELTESLVLDDINDSILKMEALKNLGVKFSMDDFGTGYSSLSYLSRLPLDQ 964 Query: 436 LKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGY 495 LKID+ F+ I T+ + ++ ++++A L M +AEGVET EQ +L RG QGY Sbjct: 965 LKIDQSFVRDITTDQHDAAIVQTIISMALSLGMEVIAEGVETEEQREFLDLRGCQAYQGY 1024 Query: 496 WISRPLPLDDFVRWLKK 512 ++P+P+++ L + Sbjct: 1025 LYAKPMPIEELEIKLAQ 1041 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 95/430 (22%), Positives = 172/430 (40%), Gaps = 25/430 (5%) Query: 112 EMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT- 170 + PL L + + +D A+ +++ + N L Sbjct: 653 ALHDPLTGLPNRAMLGQKLDSALQHAMLNSTRVALLMLDLDHFKNVNDSFGHHFGDELLH 712 Query: 171 -------------PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMP-VRETK 216 + E + +S + R+++ + Sbjct: 713 QVSARLKQQLRESDVVCRLGGDEFTVLLQNNPSPDDVSLLAERIIHALHQPFLLSNAREV 772 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---------VGLLCYYLMSVRMRPGRE 267 + G + + LY + + + M + R+ + Sbjct: 773 MIGTSIGISLYPEHGSTAEELMQQADTAMYRAKHDGRDGYRYFSEELFLKAKARLELEQR 832 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + AI ++F V YQP + + ++ G E LLRW P G IPP FI+ AE +I + Sbjct: 833 LHRAITGQEFKVFYQPQISIKTNQIIGAEALLRWDDPEYGLIPPSEFISVAEETGLIQNI 892 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + + R + + +N++P LH + I +L + + LE Sbjct: 893 GEWVLYETCRQGRDWLDQHLPPINLAVNLSPLQLHHGDVRQLIGTILHNSGFPAHHLELE 952 Query: 388 ITERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE +++ ++E ++ L G+ IAIDDFGTG+S+L YL++F LD LKID+ F+ I Sbjct: 953 LTESALMEQQEETVKILQGLRQQGIRIAIDDFGTGYSSLAYLKQFPLDVLKIDKRFVEDI 1012 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 E + ++ + L + +AEGVET Q +L ++G ++ QGY S PLP ++F Sbjct: 1013 PHERDDMEIAATIVAMGHSLRLTVLAEGVETKAQLEFLEQQGCDYYQGYLYSMPLPAEEF 1072 Query: 507 VRWLKKPYTP 516 + L + P Sbjct: 1073 AQLLSQQNPP 1082 >UniRef50_A6WTB4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=20 Tax=Shewanella RepID=A6WTB4_SHEB8 Length = 1497 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 115/507 (22%), Positives = 207/507 (40%), Gaps = 31/507 (6%) Query: 34 VAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQ---QANPELTARAAFS 90 ++ + D L +++++ L + + L + C + +A + Sbjct: 983 QSFTQFVQMNDGLASEIKQLLSD--SQSWTGERELINASQQPCPVWLNVSVMQSANGKVT 1040 Query: 91 MNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVI- 149 V F + ++K + + + +P + + + + K A++ Sbjct: 1041 HYVVVFSDITERKQTEADLRRLANYDVLTGLPNRSLFSSRLLQSIQAAQQTGEKLALLFL 1100 Query: 150 WYRNPLLKNSGVFAALNLNLTPS--------------LFYSSRQEDYDGVALIIGNTALS 195 N ++ L L E + ++ Sbjct: 1101 DLDRFKHVNDSYGHSMGDALLVEASSRLQSCIASEHMLCRFGGDEFVILLRNANSIDDIN 1160 Query: 196 TFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGL 252 + RL+ + + ++ DD + + M G Sbjct: 1161 HIAERLLEQIVAPFKLYGREFYISTSIGISIWPDDAVQPEAFIKNADLAMYHAKEEGRGN 1220 Query: 253 LCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVD-TQALRVTGLEVLLRWRHPV 305 YY +R ++ AI+R++F + YQP +D + ++ G+E L+RW+HP+ Sbjct: 1221 FQYYSSERNAQALYHLRLEADLRKAIERQEFELYYQPQIDILRNDKLIGMEALIRWKHPL 1280 Query: 306 AGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSES 365 G I PD FI AE+ +IV + + + A K K +NI+ H Sbjct: 1281 DGFIRPDIFIKVAEACGLIVDIDRWVLRQACVQGAHWAKRYGSTFKLSVNISAVHFRQPD 1340 Query: 366 FKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSA 424 F DIQ +L + LEITE ++KE A + L S+G+E+AIDDFGTG+S+ Sbjct: 1341 FIEDIQSILHETQMPTASLGLEITEGVLMKELHVAKDHLSRLKSLGIEVAIDDFGTGYSS 1400 Query: 425 LIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWL 484 L YL F ++ LKIDR F+ I T ++ +++ LA+ L + VAEG+ET EQ + Sbjct: 1401 LAYLRHFEVNTLKIDRSFLIDIATNKADQAIVSSIIELARNLKLNVVAEGIETVEQLEQV 1460 Query: 485 SERGVNFMQGYWISRPLPLDDFVRWLK 511 RG +QGY+ ++P+ + DF R+L+ Sbjct: 1461 FSRGCYIIQGYYFAKPMCVADFERYLE 1487 >UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Shewanella RepID=A6WKV6_SHEB8 Length = 921 Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats. Identities = 113/494 (22%), Positives = 188/494 (38%), Gaps = 62/494 (12%) Query: 30 LQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRL--QPLTLDTCQQANPELTARA 87 + A + + + +T + YF L +R+ +QA A Sbjct: 476 FVAVFADISAQKENEAQLTHL-----AYFDPLTHLPNRMKFMMQLKQEVRQAKRLNLQLA 530 Query: 88 AFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAI 147 ++V F + D F S EM + L + + + G Sbjct: 531 TVMIDVDLFKHINDS--FGHSIGDEMLVELAKRLRSQV-----------GDQ-------- 569 Query: 148 VIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNEL 207 L E ++ I N + ++L V E Sbjct: 570 -----------------------DVLSRIGGDEFVALISGIDNNEDATVAINQLRQVFEQ 606 Query: 208 TDMP-VRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMSV----- 260 + + + V LY +D T D M G Y + Sbjct: 607 PFIVSTGDHLRLTASMGVSLYPNDGTDADTLLRNADAAMYRAKNDGRNNYAFYTESLTQQ 666 Query: 261 ---RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 ++ + AI++ Y+ YQP +D + + G E LLRW P G I P FI Sbjct: 667 SFEHLKLQSALYGAIEQNALYLMYQPKLDLVSRKTVGFEALLRWHDPQLGLISPAVFIPV 726 Query: 318 AESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSL 377 AE +I + + E R + + +N+A L SF D++++L Sbjct: 727 AEKIGLIHEIGLWVLETACRQGMRWLREGKHFGRIAVNVAGQQLQRSSFVDDVKRVLAET 786 Query: 378 PAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYL 436 + LE+TE M++ + A + L +G+E+++DDFGTG+S+L YL++ + L Sbjct: 787 GLPAKHLELEVTESVMMQNPDLAIRDLKRLGDLGIELSVDDFGTGYSSLNYLKKLPIHKL 846 Query: 437 KIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYW 496 KID+ F+ I +T + + AV+ L L + +AEGVET EQA +L + + QGY Sbjct: 847 KIDQSFVRDIPFDTNNTAIAKAVIALGHALKLDIIAEGVETKEQADFLQQNQCDQAQGYL 906 Query: 497 ISRPLPLDDFVRWL 510 SRP +D +L Sbjct: 907 FSRPQLPEDLDAFL 920 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats. Identities = 105/468 (22%), Positives = 183/468 (39%), Gaps = 37/468 (7%) Query: 69 QPLTLDTCQQANPELTARAAFSMNVRTFV----LVKDKKTFCSSATGEMDIPLNELIPAL 124 Q L + + LT AA ++ ++D + PL L Sbjct: 391 QLLHITAIRDREGVLTHYAALFTDISRLKETEARIRDLAYY---------DPLTGLPNRR 441 Query: 125 DINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT-------------- 170 ++ + + + + + + N + A+ L Sbjct: 442 LLDDRLQVELAHAARLRCRLAVMFVDLDRFKRINDSLGHAVGDKLLVEIAARLRASLRDD 501 Query: 171 PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADD 230 ++ E + + G +T + R++ + + V +Y DD Sbjct: 502 DTVARMGGDEFLVVLNNLSGPDEAATMARRMVAELRRPVNVEGRELVVTTSVGVAVYPDD 561 Query: 231 WTWNDVWYAFLLGGMS-GTVVGLLCYYLMS--------VRMRPGREIMTAIKREQFYVAY 281 D M G + L R+ + A+ R++ + + Sbjct: 562 SRDADTLVKHADVAMYRAKDEGRNSFQLFEPAMNARSLERLALETALHRALPRDELQLYF 621 Query: 282 QPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAE 341 QPV+ + + +E LLRWRHP G + P FI AE +IVP+ + + Sbjct: 622 QPVMKAEGGELVAVEALLRWRHPDLGLVSPADFIPLAEDTGLIVPIGEWVLRSACEHHRR 681 Query: 342 LEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-AT 400 + + +NI+ E F A + +L + LE+TE ++ + + A Sbjct: 682 WCEAGGAPLHMMVNISARQFREEGFAAMVGSVLAETGMTPGDLTLELTESMLMDDTDRAL 741 Query: 401 QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVL 460 L ++GV +AIDDFGTG+S+L YL+RF +D LKIDR F+ I T + ++ A++ Sbjct: 742 ARLDHLRALGVCLAIDDFGTGYSSLAYLKRFPIDELKIDRLFVRGIDRNTRDAALVSAIV 801 Query: 461 TLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVR 508 +L L + VAEGVET L +G + QG+ S PLP ++FV+ Sbjct: 802 SLGHSLGLRVVAEGVETAAHLDVLRRQGCDLAQGFHFSPPLPWEEFVK 849 >UniRef50_B7KBH1 Diguanylate cyclase/phosphodiesterase n=9 Tax=Chroococcales RepID=B7KBH1_CYAP7 Length = 712 Score = 490 bits (1263), Expect = e-137, Method: Composition-based stats. Identities = 87/391 (22%), Positives = 168/391 (42%), Gaps = 10/391 (2%) Query: 132 MAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGN 191 + L + + + +L+ G ++ ++ E + I Sbjct: 309 ILFLDLDGFKNINDTLGHTFGDQVLQKFGKRLLGSVRAGDTVCRWGGDEFVVLLPYISHT 368 Query: 192 TALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSG---T 248 + R+++V + ++ + + +Y D + + Sbjct: 369 EDSIKLAQRILDVLKHPFEIQKQQFYIKTSMGISIYPQDGEDGETLLKNADAALYRAKER 428 Query: 249 VVGLLCYYLMSVR------MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWR 302 +Y ++ +R + A++ ++ + YQP V + +TG+E LLRW Sbjct: 429 GRNHFQFYSTTMTTKASLVLRLENLLHRALENQELSLYYQPQVKIKTGEITGIEALLRWT 488 Query: 303 HPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLH 362 HP G++ P I AE +I+P+ Q + + + + +K+ + +N + Sbjct: 489 HPELGQVSPHKLIPLAEQTDLIIPIGQWALKTACQQSLDWQKLGIKPLPIAVNFSARQFQ 548 Query: 363 SESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTG 421 + I ++L + LEITE +++ ++ A Q L +GV I++DDFGTG Sbjct: 549 QPNLVTLINQVLEETGLAPNLLELEITETTIMQNEDFARQALEELRQMGVHISLDDFGTG 608 Query: 422 HSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQA 481 +S+L YL++F L LKID+ F +++ ++ A++TL L + +AEGVET +Q Sbjct: 609 YSSLSYLQKFPLTTLKIDQCFTHSLKDNPQDLAIISAIITLGNHLQLRVIAEGVETLQQL 668 Query: 482 RWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 L QG+W SRPL +D + LK+ Sbjct: 669 EILQRLHCQEAQGFWFSRPLNSEDITQLLKQ 699 >UniRef50_B6BGL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGL3_9PROT Length = 671 Score = 490 bits (1263), Expect = e-137, Method: Composition-based stats. Identities = 94/510 (18%), Positives = 186/510 (36%), Gaps = 66/510 (12%) Query: 10 RKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQ 69 +K ++ I+ + IL +F+ + +Y L +R Sbjct: 212 KKTVVIHIIFWFVGMIL---FRFVYNKER-------KARYELEYFAN-HDSLTGLPNRHA 260 Query: 70 PLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKN 129 N A M++ F + D + + + + + Sbjct: 261 -YIDKITSMVNKNKNNFALIFMDLDNFKTINDS--LGHTLGDMLLQKVAKRLKN------ 311 Query: 130 VDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALII 189 + L E + + Sbjct: 312 ------------------------------------EIKEYDMLSRFGGDEFVFLFSNVQ 335 Query: 190 GNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GT 248 + ++ V + + + + +Y DD ++ M Sbjct: 336 SELTIEKTMIKIHEVLKKPFILNTYEVYTTASIGIAIYPDDAQDAELLLRNADVAMYDAK 395 Query: 249 VVGLLCYYLMSV--------RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLR 300 G Y + R+ E+ A++ + ++ +QP V ++ G+E L+R Sbjct: 396 QSGRSKYSFFNADMLNLSSNRLMLESELHKALENNELFLLFQPQVSLWNEKIVGVEALIR 455 Query: 301 WRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDH 360 W+HP G I P FI AE+ +I+P+ + + + A + IN++ Sbjct: 456 WQHPTKGLISPLDFIPIAENSGLIMPIGEWIIDQACDQLALWKDTHMSEATLSINVSAKQ 515 Query: 361 LHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFG 419 + + + I+ + + LEITE +++ E ++ + L +GV IAIDDFG Sbjct: 516 VLHQDLYSYIEAAIERTKIDGRFLELEITESVIMENINETVRILSRLKKLGVSIAIDDFG 575 Query: 420 TGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPE 479 TG+S+L YL++ +D LKIDR FI I + + +A+++++K L++ VAEG ET E Sbjct: 576 TGYSSLSYLKKLPIDKLKIDREFIKDIPNDKDDIAITNAIISMSKSLSLKIVAEGPETKE 635 Query: 480 QARWLSERGVNFMQGYWISRPLPLDDFVRW 509 +L + QG++ S+P+ + + + Sbjct: 636 HIEFLQNSKCDIAQGFYYSKPITIVEVEKL 665 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 489 bits (1261), Expect = e-137, Method: Composition-based stats. Identities = 107/480 (22%), Positives = 177/480 (36%), Gaps = 57/480 (11%) Query: 37 HKHEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVR 94 + EV I +YL L +R LQ + A + T A +++ Sbjct: 649 LESEVLERRRIESKLRYLAH-HDALTGLANRTLLQQRLGEAMDNAAQDDTKVAILFIDL- 706 Query: 95 TFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNP 154 ++ + Sbjct: 707 -------------------------------------------DRFKTINDSLGHHIGDT 723 Query: 155 LLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRE 214 LLKN L ++ E + L +S++++ Sbjct: 724 LLKNVASRLTETLRSNDTIARLGGDEFMIILPLKANEALAGKLASKILDALRPPIRIDGH 783 Query: 215 TKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSVR------MRPG 265 + + Y +D + M CY+ + + Sbjct: 784 ELFVTPSIGICFYPNDGVTVNALMRNADTAMYQAKANGRNTYCYFTAEMNAAADNYFQIE 843 Query: 266 REIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIV 325 ++ A+ R +F V YQPV+D + R+T E L+RWRHP G + P FI AE +I Sbjct: 844 SDLRRAVDRNEFEVFYQPVIDLKTHRITSYEALVRWRHPTKGLVGPAQFITVAEESGLIG 903 Query: 326 PLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIV 385 + + +N++P + + I ++L +I Sbjct: 904 EIGTIVLRQACSQLRSWIDEGFTSPILALNLSPIQFNDPNLTEGICRILRDYDLTPDRIE 963 Query: 386 LEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFIN 444 LEITE ++++ E A L S G ++IDDFGTG+S+L YL+RF +D LKIDR FI Sbjct: 964 LEITETVIMQDGELALGTLQNLSSRGFRLSIDDFGTGYSSLAYLKRFPVDTLKIDRSFIT 1023 Query: 445 AIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLD 504 + ++ A++ LA L++ +AEGVET EQ LS NF QGY++++P+P + Sbjct: 1024 DMTANENDRAIVTAIMALANSLHLSVIAEGVETKEQYDLLSALNCNFAQGYYMAKPMPAE 1083 >UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6N3_NITMU Length = 1025 Score = 489 bits (1261), Expect = e-137, Method: Composition-based stats. Identities = 105/493 (21%), Positives = 184/493 (37%), Gaps = 57/493 (11%) Query: 30 LQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARA 87 +A + YL F L +R + A+ Sbjct: 562 FLQSLANILATAIDRKTTEERLTYLAQ-FDPLTELPNRSLFLDRLRQAMEHAHRNRRRVG 620 Query: 88 AFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAI 147 ++ + Sbjct: 621 VVFADL--------------------------------------------DRFKIVNDTM 636 Query: 148 VIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNEL 207 + LL + + ++ E ++ ++ + + ++++ ++ Sbjct: 637 GHSTGDELLIHVAKRLQQCVRSCDTVARLGGDEFALILSDLVQPEDATLIAEKVISALQV 696 Query: 208 TDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVV---GLLCYYLMSV---- 260 + L + +Y D T D M + +YL + Sbjct: 697 PFELETQEIYVSASLGISIYPGDGTDADSLLRNADTAMFQAKEQGPAIYQFYLPQMNERA 756 Query: 261 --RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFA 318 R++ ++ A+ R +F + YQP +TG E LLRW+HP G +PP FI+ Sbjct: 757 VARLKIETQLRGALARREFVLHYQPKASLINGEITGFEALLRWQHPAHGLVPPLQFISVL 816 Query: 319 ESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLP 378 E +IV + + + + + E + V IN++ + + I + L + Sbjct: 817 EDTGLIVAVGEWVVKTVCEQIREWQGQGLVLHPIAINLSARQFQQQDLDSIIGETLRATN 876 Query: 379 AHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLK 437 + E+TE ++KE E A L + GV+I++DDFGTG+S+L YL+RF LD LK Sbjct: 877 IDPRLLEFELTESVLMKEAEMAANALQNLKAFGVQISMDDFGTGYSSLAYLKRFPLDVLK 936 Query: 438 IDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWI 497 IDR FI + T+ + + A++ LA L + VAEGVET Q +L G + MQGY+ Sbjct: 937 IDRAFIRDVTTDPDDATITVAMIKLAHSLGLKVVAEGVETRAQLEFLIRHGCDEMQGYYF 996 Query: 498 SRPLPLDDFVRWL 510 S+PLPL+ + L Sbjct: 997 SQPLPLEGASKVL 1009 >UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=cellular organisms RepID=B0CAC5_ACAM1 Length = 901 Score = 489 bits (1261), Expect = e-137, Method: Composition-based stats. Identities = 99/432 (22%), Positives = 181/432 (41%), Gaps = 27/432 (6%) Query: 112 EMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT- 170 L +L + N +++A+ + + + L N + ++ L Sbjct: 450 AFHDALTDLPNRVLFNDRLNIALASAQRNNGSVAVMFMDLDRFKLINDTLGHSIGDELLK 509 Query: 171 -------------PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 ++ E + I + R+++ + + R Sbjct: 510 EVALRLQDCLRDGDTVARWGGDEFTVLLPKIESVNDAINTAYRILDALKAAFVIRRHELF 569 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMS-----GTVVGLLCYYLMS--VRMRPGREIMT 270 + + +Y +D ++ + G L M+ + + Sbjct: 570 VTTSIGIAIYPEDGQEAEILLQNADVALYRSKEQGRGTCQLYNPTMNAKEQFILENSLRH 629 Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 A+ R++F + YQP V+ + GLE L+RW HP G + P FI AE +IV L + Sbjct: 630 ALDRDEFILHYQPKVNICTGEIVGLEALVRWEHPEMGLVSPATFIPIAEETGLIVELGEW 689 Query: 331 LFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITE 390 + + A K+ + IN++ + + + +++ S + Q+ LEITE Sbjct: 690 VLRTACQQAVLWHKLGLAPLSVAINLSARQFYQPNLVEIVAQVIESTGLNPQQLELEITE 749 Query: 391 RDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTE 449 +K E A + L ++GV IA+DDFGTG+S+L YL++ + LKID+ FI + Sbjct: 750 TIAVKNMEFAKSILCNLQALGVHIAMDDFGTGYSSLNYLKQLPFNTLKIDQSFIQDLKPA 809 Query: 450 TITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLD---DF 506 + +++AV+ L K L++ VAEGV+ EQ L +QGY SRPL +D D Sbjct: 810 SKDVEIINAVIALGKGLDLKVVAEGVDNEEQLELLRSLNCEIVQGYLFSRPLSVDSTTDI 869 Query: 507 VR--WLKKPYTP 516 ++ WL++ + Sbjct: 870 LQANWLQRNQSQ 881 >UniRef50_A3JAE8 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Marinobacter sp. ELB17 RepID=A3JAE8_9ALTE Length = 828 Score = 489 bits (1261), Expect = e-137, Method: Composition-based stats. Identities = 109/477 (22%), Positives = 194/477 (40%), Gaps = 47/477 (9%) Query: 56 TYFADLKSTTDRLQPLTLDTC--QQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEM 113 Y L +R + C A+ E A +++ F V D T ++ Sbjct: 378 AYHDSLTGLPNRFRAHETLRCMISLAHRESRRMAVLFLDLDNFKRVND--TLGHQVGDQL 435 Query: 114 DIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSL 173 + + + + ++V + ++ N L Sbjct: 436 LMEMAIRLQVVLRAEDV------------------------------IHQEVSQNTLDVL 465 Query: 174 FYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTW 233 E ++ + + + +SR++++ +L +G + + L+ D + Sbjct: 466 ARLGGDEFVVLLSNVSSSRDAAKVASRILDIMKLPFYFNENEIYSGCSIGISLFPSDGSD 525 Query: 234 NDVWYAFLLGGMSGTV---VGLLCYYLMS------VRMRPGREIMTAIKREQFYVAYQPV 284 D M +Y S + + A+K + + YQP+ Sbjct: 526 VDDLIKRADAAMYQAKSQGRNNFQFYSASYNLAALEHISLEGRLRRALKNNELVLYYQPL 585 Query: 285 VDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEK 344 V + ++ GLE LLRW P+ G IPPD FI AE +I+PL + + R + Sbjct: 586 VQARTGKIVGLEALLRWNDPLDGIIPPDRFIPVAEESGLILPLGEWVLREAGRQLSTWHA 645 Query: 345 VLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLK-EQEATQLF 403 +N++ L + + ++L +Q+ LEITE +++ E Sbjct: 646 AGFTDACVSVNVSAIQLQRQDLVTIVDQVLKDNGLRPWQLELEITETALMRIRPEVIGDL 705 Query: 404 AWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLA 463 + GV I++DDFGTG+S+L L+ + LKID+ F+ + + + ++ AVL +A Sbjct: 706 NAMRRKGVTISLDDFGTGYSSLSLLQELPIGKLKIDKSFVRDMLVDPKDAAIVSAVLFIA 765 Query: 464 KRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYT---PQ 517 K L + + AEGVETPEQA L+E G + +QGY + RPLP+ + +LK PQ Sbjct: 766 KSLGLQSTAEGVETPEQAARLAEEGCDQLQGYLLCRPLPVAEMTEFLKSRKNIEIPQ 822 >UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY13_9BACT Length = 857 Score = 489 bits (1261), Expect = e-137, Method: Composition-based stats. Identities = 100/498 (20%), Positives = 177/498 (35%), Gaps = 57/498 (11%) Query: 29 CLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTAR 86 ++ + YL Y+ L + +R A+ + Sbjct: 401 GFISHYLAIMEDITEHKQAEERIHYLA-YYDSLTALPNRELFHDRLNMAIIHAHRKQQML 459 Query: 87 AAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPA 146 A +++ F V D T S + + + + + Sbjct: 460 AVAFIDIDRFKKVND--TLGHSTGDRLLKIIADRLKSC---------------------- 495 Query: 147 IVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNE 206 + ++ E + I + + R++ + Sbjct: 496 --------------------IREEDTVSRQGGDEFVLLLTEISRMEDANDVTQRILKKLK 535 Query: 207 LTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMS------ 259 + + + LY D T + M G Y+ S Sbjct: 536 EPVIIDDHDLCISASIGIALYPGDGTTAEALLKNADSAMYISKESGRDNYHFYSSTVQEK 595 Query: 260 --VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 ++ + A++ + + YQP V+ R+ G+E LLRW+HP G I P FI Sbjct: 596 AYEQLLEEMYLRRALENRELVLYYQPQVNIATGRLVGMEALLRWKHPKKGLISPAEFIPL 655 Query: 318 AESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSL 377 AE IVP+ + + ++ V +NI+ E+ + +L Sbjct: 656 AEDTGQIVPIDFWVLHTACKQNMAWQRAGLPSVPIAVNISGHTFGRENLIDFVNNVLHDT 715 Query: 378 PAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYL 436 + LEITE ++ + L S+G++I IDDFGTG S+L YL +F + L Sbjct: 716 RMSPDALDLEITEGIAIQNLQTTIYKLNKLKSLGIQITIDDFGTGFSSLSYLSKFPIQKL 775 Query: 437 KIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYW 496 KI FI+ + + S ++ AV+ +AK L + +AEGVET EQ +L + QGY Sbjct: 776 KIGMTFIHNLHKDPTNSAIVKAVIAMAKSLQLTVIAEGVETDEQFEFLQGLQCDEFQGYL 835 Query: 497 ISRPLPLDDFVRWLKKPY 514 S+ + ++ R+L K Sbjct: 836 CSKAVTSEEMGRFLAKNA 853 >UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=4 Tax=Rhizobiaceae RepID=A6U700_SINMW Length = 772 Score = 489 bits (1261), Expect = e-137, Method: Composition-based stats. Identities = 94/499 (18%), Positives = 172/499 (34%), Gaps = 58/499 (11%) Query: 30 LQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPL--TLDTCQQANPELTARA 87 L + A D +L L +R+ ++ Sbjct: 319 LIAMAAHLAGIAIERKRAEDRISFLAH-HDALTGLPNRVLFEEQVDGMLEEIRERDQCAV 377 Query: 88 AFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAI 147 +++ F L+ D A G+ + + K + + Sbjct: 378 LAFLDLDNFKLINDSL---GHAAGDELLKAVAGRMRASVRKADFVVRV------------ 422 Query: 148 VIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFS-SRLMNVNE 206 E + + + + + Sbjct: 423 -----------------------------GGDEFIILLNGLPKERDIVLSRLEDIRSAIA 453 Query: 207 LTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---------VGLLCYYL 257 + + + V + + A M Sbjct: 454 MPLQLQGRSLQVSCSMGVACFPNQGRTAGELLANADMAMYRAKELGRDNIQVFTEEMAAR 513 Query: 258 MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 R++ E+ A+ E+F + +QP ++ R+ E LLRW HPV G I P FI Sbjct: 514 AHERLQWQEELREALAGEEFLLHFQPQMNLGTGRIFAAEALLRWNHPVRGIISPSVFIPL 573 Query: 318 AESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSL 377 AE +IVP+ R + + +N++ ++ + + ++L Sbjct: 574 AEETGLIVPIGDWALRAACRQLKAWQDAGLPPLIISVNVSARQFRERNWASRVAEILKET 633 Query: 378 PAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYL 436 + LE+TE ++++ A L ++GV +AIDDFGTG+S+L L+RF + L Sbjct: 634 GLEARYLELELTESLIMQDVPGAIATMHALEAIGVHLAIDDFGTGYSSLSALKRFPVRRL 693 Query: 437 KIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYW 496 KIDR F+ I + + A+++LA++L + +AEGVE+ Q +L + G + +QGY+ Sbjct: 694 KIDRSFVTDIPLDADDMAITSAIISLAQKLGLRVIAEGVESEAQVEFLQKAGCDEIQGYF 753 Query: 497 ISRPLPLDDFVRWLKKPYT 515 SRPL + F L Sbjct: 754 FSRPLSAEAFESLLSSARP 772 >UniRef50_B7KEZ6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=3 Tax=Cyanothece RepID=B7KEZ6_CYAP7 Length = 589 Score = 489 bits (1261), Expect = e-137, Method: Composition-based stats. Identities = 85/391 (21%), Positives = 167/391 (42%), Gaps = 11/391 (2%) Query: 132 MAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGN 191 + L + + +LK + + + +N SL + E + Sbjct: 190 ILTLGLDRFRRINESFGYNLGDLVLKIAAQYLSQCINNQGSLARLNGDEFAILLKATQDK 249 Query: 192 TALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVG 251 ++ ++ +L+ + + + + + + Y +D + + M Sbjct: 250 EIVANYAQKLLKLFSQPLLINEQEIFLSLSIGISFYPEDGSTLETLLQKANSAMKRAKYL 309 Query: 252 LLCYYLMSVR----------MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRW 301 Y + + ++ A++R + V YQP + + + G E L RW Sbjct: 310 GGDRYEFYPKCYQKIPSPDYLELEADLRHALERNELEVHYQPRLSLSSGEIVGAEALTRW 369 Query: 302 RHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHL 361 HP G + P FI AE +I P+ + + + ++ ++ +N++ Sbjct: 370 YHPRRGLVSPGIFIPIAEETGLIEPIGEWVLRTACEQSKIWQEKGLGLIRVAVNLSGRQF 429 Query: 362 HSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGT 420 + + + K+L + + LE+TE +++ E+ Q L ++GV+IAIDDFGT Sbjct: 430 NQLNLSQWVAKILRETKINSHLLELELTESILVENASESIQKLNDLKTLGVKIAIDDFGT 489 Query: 421 GHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQ 480 G+S+L YL++F D LKIDR F+ I + + + A++ LA +L + VAEG+ET + Sbjct: 490 GYSSLSYLQQFPFDILKIDRCFVRNIDQNSKNAAITQAIIFLAHQLGLTVVAEGIETKSE 549 Query: 481 ARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 +L + MQGY SR + +F ++ Sbjct: 550 LSFLQNHQCDEMQGYLFSRSVKASEFEHLVQ 580 >UniRef50_C6P3U3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3U3_9PROT Length = 600 Score = 489 bits (1261), Expect = e-137, Method: Composition-based stats. Identities = 95/540 (17%), Positives = 182/540 (33%), Gaps = 90/540 (16%) Query: 2 FIRAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADL 61 F R K L + + + L+ A + + K + Y L Sbjct: 119 FWRHELAQEKERLLQEIQSANVLLSQLNLELASAMEHKDSQ--------IKRIAHY-DSL 169 Query: 62 KSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNE 119 + +RL +AN + A S+++ F V + F ++ + + Sbjct: 170 TALPNRLLFLDRLDQEVARANRDDQMVAVLSLDLDRFKKVNES--FGHPVGDQLLQTVAK 227 Query: 120 LIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQ 179 + + + ++ + Sbjct: 228 KLSS------------------------------------------QIRACDTVARIADD 245 Query: 180 EDYDGVALIIGNTALSTFSSRLMNVNEL-TDMPVRETKIAGIPLTVRLYADDWTWNDVWY 238 E + + A + ++++ + + + +Y D Sbjct: 246 EFAIVLTGVKATHAAGEVAQKILDSFAHSPISISDSEVFITLSIGISIYPVDGVNTTALL 305 Query: 239 AFLLGGMSGTVV---GLLCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQA 289 + YY + + R++ E+ A+ R +F + YQP VD Sbjct: 306 KSADTALHQAKREGRNNFQYYTVQMNATSWQRLKLETELRQALARNEFELHYQPKVDMDC 365 Query: 290 LRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVG 349 ++ G+E LLRW+ G + P FI E +I+P+ + + + A + Sbjct: 366 NKIVGMEALLRWQSAERGLVTPAEFIPLLEETGLILPVGEWVLREACKQARAWQDAGIPD 425 Query: 350 VKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKE------------- 396 V +N++ F + K++ + Sbjct: 426 VHIAVNLSSLQFRQPDFAGSVLKIMQEHGLDPA-----------MNGIELELTESLLLDN 474 Query: 397 -QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPV 455 LH G+ +IDDFGTG+S+L YL+RF + LKID+ F+ + + + Sbjct: 475 VARTIDTLNTLHEAGIRFSIDDFGTGYSSLSYLKRFPISSLKIDQSFVQDLSSNRDDESI 534 Query: 456 LDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYT 515 + A++ L + L + +AEGVET EQ+ L G + MQGY SRP+P+ + L+ Sbjct: 535 VSAIIALGRSLGLSVIAEGVETAEQSAQLRRMGCDGMQGYLFSRPVPVAEMTYLLQNSAN 594 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 489 bits (1260), Expect = e-137, Method: Composition-based stats. Identities = 101/483 (20%), Positives = 182/483 (37%), Gaps = 54/483 (11%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVL 98 ++ + + L Y+ L +R L D Q R + Sbjct: 236 QDITRRKEAEERIRELA-YYDSLTGLANRT--LFNDRLDQVMARSRRRQSRFA------- 285 Query: 99 VKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKN 158 + L + + +L+ Sbjct: 286 ---------------------------------LMFLDLDRFKGVNDTLGHAVGDAMLRQ 312 Query: 159 SGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIA 218 + L ++ E ++ + L + +++ + Sbjct: 313 AAERLNECLRENDTVARLGGDEFVIILSDYKEDANLPRVADKILKALSSPFDLGVREVYS 372 Query: 219 GIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGL---LCYYLMSV------RMRPGREIM 269 + + +Y DD M +Y + RM + Sbjct: 373 STSVGIAIYPDDGDEATDLLRHADMAMYAAKESGGDTFRFYSSEMNARAVSRMDMEANLR 432 Query: 270 TAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQ 329 A+++E+F++ YQP +D +V G+E LLRW+HP G IPP FI AE +I+PL + Sbjct: 433 RALEQEEFFIEYQPQIDLITNKVAGVEALLRWQHPQLGVIPPTQFIGLAEETNLILPLGE 492 Query: 330 HLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEIT 389 + + ++ + + GIN++ F + +LL A + EIT Sbjct: 493 WVMRRVFEQCVMWKQEGYLPFRVGINVSGRQFVQPDFVDMVCRLLDETGAAPELLEFEIT 552 Query: 390 ERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGT 448 E ++K+ + A L +G+ +AIDDFGTG+S+L L+ L+ LKID+ FI+ + Sbjct: 553 ESVVMKDVDAAVLTLEALKKLGINMAIDDFGTGYSSLSCLKHLPLNRLKIDKSFISDLQD 612 Query: 449 ETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV- 507 +++A + +AKRL + AEGVET Q ++ +R + +QG++ SRPL + Sbjct: 613 NADDRAIVEATIAMAKRLELGVTAEGVETEGQYGFVQKRECDEVQGFYFSRPLSPSEVAD 672 Query: 508 RWL 510 WL Sbjct: 673 AWL 675 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 106/503 (21%), Positives = 181/503 (35%), Gaps = 61/503 (12%) Query: 29 CLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTAR 86 + ++ + + + + + L +R QA Sbjct: 466 VITHYISVKEDISIRKEYEERLVRQAN--YDALTGLPNRILAMDRLKQAIAQAQRYNRKV 523 Query: 87 AAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPA 146 A +L Sbjct: 524 ALM--------------------------------------------LLDLDDFKKVNDT 539 Query: 147 IVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNE 206 + + LLK + + L ++ E + + ++ + +++ Sbjct: 540 LGHAAGDLLLKEAALRLVDCLREGDTVARLGGDEFVLLLPDLTDTSSAEVVAEKILAACN 599 Query: 207 LTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-----GTVVGLLCYYLMSVR 261 + + ++ DD + M G V M+ R Sbjct: 600 QPFDVGGHEAYIAGSIGIAIFPDDERDPILLMRNADAAMYRSKREGKGVFRYFTPEMNAR 659 Query: 262 ----MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 MR ++ AI+R + V YQP+VD+ R+ G E LLRW +PV GE+ P+ FI Sbjct: 660 ALEHMRMESQLRHAIERNEMKVHYQPLVDSGTGRLVGAEALLRWSNPVLGEVSPEQFIPL 719 Query: 318 AESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSL 377 AE +I+ + + RDAA ++ +NI+ + ++ L Sbjct: 720 AEETGLILSIGAWVLRTACRDAASWQRPDHEIF-VAVNISGKQFQKRTLVEIVRSSLNES 778 Query: 378 PAHHFQIVLEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYL 436 + LE+TE +L+ QE + L S+GV AIDDFGTG S++ YL RF D L Sbjct: 779 GLPPACLELELTESVLLEHTQETLSIIQELESLGVGFAIDDFGTGFSSISYLRRFPFDTL 838 Query: 437 KIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYW 496 KIDR FI +G + ++ +++ +A +++ V EGVET Q +L G + QG+ Sbjct: 839 KIDRSFIKDLGDNEGDADLVKSIIAMANSMSLKVVGEGVETHGQREFLRLSGCHIAQGWL 898 Query: 497 ISRPLPLDDFVRWLKK--PYTPQ 517 SRP+P DF + PQ Sbjct: 899 YSRPIPGKDFQELIDGWTHAKPQ 921 >UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LZH2_BACS4 Length = 1071 Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 85/389 (21%), Positives = 155/389 (39%), Gaps = 25/389 (6%) Query: 143 NKPAIVIWYRNPLLKNSGVFAALNLNLT--------------PSLFYSSRQEDYDGVALI 188 ++I + N + + L L E + Sbjct: 182 RLALLIIDLDRFKVINDSIGHTIGDQLLKEVGKRLVSIVSKSDLLVRKGGDEFVIVLP-S 240 Query: 189 IGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGT 248 I + ++N+ + V ++ +D D+ Y M Sbjct: 241 IKKDQVLKVVDNIINLLTSPFKIKSYDIFTSPSIGVSIFPEDGKTKDLLYKHAEFAMYQA 300 Query: 249 VVGLL--CYYLMSVRM-------RPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLL 299 ++ S E+ AI+++QF + YQP ++ + G+E L+ Sbjct: 301 KKSGNGQYHFFSSAEFNGDMNPYTIEVELRKAIEQKQFTLHYQPRINLSTGELIGVEALI 360 Query: 300 RWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPD 359 RW HP G I P +FI AE +IVP+ + E + + V +N++P Sbjct: 361 RWEHPKWGLISPASFIPIAEDSGLIVPIGNWVLEEACKQNKIWQVSGMSCV-VSVNLSPK 419 Query: 360 HLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFG 419 + + I+ L + + +EITE + +G++++IDDFG Sbjct: 420 QFAHTNLASVIKNTLFNTGLDPHLLEIEITESMTADITRTVATLEEIKKLGIQVSIDDFG 479 Query: 420 TGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPE 479 TG S+L YL++F ++ LKIDR F++ + ++ ++++A+ LN+ VAEG+ET E Sbjct: 480 TGFSSLYYLKKFPVNTLKIDRSFVSELHNNPDEETIVKTIISMARNLNLNVVAEGIETKE 539 Query: 480 QARWLSERGVNFMQGYWISRPLPLDDFVR 508 Q +L + + QG+ S+PLP Sbjct: 540 QLAFLQQHLCHEGQGFLFSKPLPPSVLEE 568 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 102/493 (20%), Positives = 181/493 (36%), Gaps = 55/493 (11%) Query: 38 KHEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRT 95 H++ + + K L +F L +R L + A +++ Sbjct: 581 HHDITERKIAEERIKELA-FFDALTRLPNRTLLLDRLRQAITASARNEACGALLFIDLDH 639 Query: 96 FVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPL 155 F + D T + + + + ++ +A + G V + + Sbjct: 640 FKTLND--TLGHDKGDLLLQQVARRLAD-SVLESDTVARVGGDEFVVVLGNLHKNRQEAA 696 Query: 156 LKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRET 215 + V R++ V + Sbjct: 697 NQTEAV------------------------------------GERILAVLGSPYHLGKIE 720 Query: 216 KIAGIPLTVRLYADDWTWNDVWYAFLLGGMSG---TVVGLLCYYLMSV------RMRPGR 266 + ++ D M + ++ + R Sbjct: 721 YRTSASIGATVFRGHQASIDELLKQADLAMYKSKERGRNAVRFFDPDMQTVVVQRAALEA 780 Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 + AI+ QF + YQ V RVTG E L+RW+HP G +PP FI AE +IV Sbjct: 781 GLRNAIEDNQFLLHYQAQV-VGT-RVTGAEALVRWQHPQRGIVPPAEFIPLAEETGLIVA 838 Query: 327 LTQHLFELIARDAAEL-EKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIV 385 L + E A + + +N++ F ++ ++ A ++ Sbjct: 839 LGSWVLEAACAQLARWAARPDMAHLTIAVNVSVQQFRKADFVDNVLTIIGRTGARPDRLK 898 Query: 386 LEITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFIN 444 LE+TE ++ Q+ + + L + G+ A+DDFG G+S+L YL+R LD LKIDR F+ Sbjct: 899 LELTESVLVDNVQDIIEKMSALKAKGIVFALDDFGIGYSSLSYLKRLPLDQLKIDRSFVR 958 Query: 445 AIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLD 504 + ++ + + ++ LA+ L + +AEGVET Q +L+ G QGY+ RPLP++ Sbjct: 959 DVLVDSNDAVIARTIVALARSLGLGVIAEGVETEAQRDFLAAAGCYAYQGYYFCRPLPIE 1018 Query: 505 DFVRWLKKPYTPQ 517 DF L T Q Sbjct: 1019 DFEALLNNVETRQ 1031 >UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31G31_THICR Length = 891 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 97/488 (19%), Positives = 185/488 (37%), Gaps = 58/488 (11%) Query: 42 KYDTLITDVQKYLD--TYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTFV 97 + + LD Y L +R+ QA A +++ F Sbjct: 445 DIQEQLQQQKNDLDFIAYHDPLTDLPNRILFLDRLTQAIHQAQRNHDKVALLFIDLDRFK 504 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 + D F ++ + I + + Sbjct: 505 EINDS--FGHASGDLVLIECGKRLKK---------------------------------- 528 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 + ++ E + + N + +++ Sbjct: 529 --------AIREIDTVARLGGDEFTILIDELKTNNVIINVVKKIIKTLSDPIFVNENIFH 580 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSV------RMRPGREI 268 + + ++ +D T + M +Y + R+ + Sbjct: 581 ITASIGISIFPNDGTDANQLLQNADAAMYQAKEDGKNTYHFYTKEMTEQAYNRLLMENNL 640 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A+ +QF + YQP VD ++ G E L+RW H G IPPD FI AE +I+PL Sbjct: 641 RDALDNQQFELYYQPQVDITTNKIVGFEALVRWNHEQKGIIPPDHFIPLAEETGLIIPLG 700 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + + ++ +E + + IN++ L F ++ L I +EI Sbjct: 701 KQIIAMASQTISEWHQANLTNARIAINVSAKQLRDSRFFHNLNTALNKNNCQPDWIEIEI 760 Query: 389 TERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE +++ E A +L + L G+ I+IDDFGTG+S+L YL++ + +KIDR F++ + Sbjct: 761 TESSVMQNPELAIKLLSKLRRKGITISIDDFGTGYSSLAYLKKLPITKVKIDRSFVSNLP 820 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + + + A++++++ LN+ +AEG+ET EQ ++ + G +QGY+ SRPL Sbjct: 821 QDKDDAEITKAIISMSQSLNLDIIAEGIETQEQQNFVLQEGCKLIQGYYYSRPLTKKAMT 880 Query: 508 RWLKKPYT 515 L+ + Sbjct: 881 AKLESLQS 888 >UniRef50_C5V2W0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V2W0_9PROT Length = 1275 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 99/481 (20%), Positives = 173/481 (35%), Gaps = 59/481 (12%) Query: 49 DVQKYLDTY--FADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKT 104 LD + L +R + A +N+ F V D Sbjct: 703 KALAELDHLKHYDALTDLPNRALLEDRIESSITHARQYERFIGVIFLNLDHFHTVND--- 759 Query: 105 FCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAA 164 L + I ++ PA Sbjct: 760 ------------------MLSHAGGDQVLIATAKRLMDAAPA------------------ 783 Query: 165 LNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTV 224 S+ S + + + ++ + + ++ + + Sbjct: 784 -----QASISRLSADTFVIALPDLNTSEEINRTAELIAQKIYQPLTVADQSVQLSARMGI 838 Query: 225 RLYADDWTWNDVWYAFLLGGMSGTV----VGLLCYYLMSVR------MRPGREIMTAIKR 274 +Y D ++ +Y S+ + G E+ AI + Sbjct: 839 SVYPIDGNDATTLMKHADAALADAKQCGVRNSFRFYSSSMNEHAHKLLTMGAELRNAISQ 898 Query: 275 EQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFEL 334 + + YQP VD ++ G E L+R HP G I P FI+ AE +I+P+ + Sbjct: 899 NRLVLHYQPQVDIITGQIIGAEALIRINHPERGIISPGEFISVAEETGLIIPMGTWVIRE 958 Query: 335 IARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDML 394 R + + + IN++P LH + L + + LE TE ++ Sbjct: 959 ACRQMQQWHLDKNIELTIAINLSPLQLHQSDLPEIVSLALHDSGLNARYLELEFTESAIM 1018 Query: 395 KEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITS 453 K E + ++G+ ++IDDFGTG+S+L YL++F +D LKID+ F++ I + + Sbjct: 1019 KNVRETVAIMNKFKAMGLHLSIDDFGTGYSSLSYLKQFPVDKLKIDQSFVSNITQDPNDA 1078 Query: 454 PVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKP 513 ++ A++ L + L M T+AEGVET Q +L MQGY S PLP ++F L + Sbjct: 1079 AIVQAIIALGRTLGMTTIAEGVETEAQLGYLRSVNCKEMQGYLYSAPLPAEEFAALLVRG 1138 Query: 514 Y 514 Sbjct: 1139 K 1139 >UniRef50_Q47EK9 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47EK9_DECAR Length = 963 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 104/410 (25%), Positives = 174/410 (42%), Gaps = 12/410 (2%) Query: 113 MDIPLNELIPALDINKNVDMAIL--PGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT 170 M + + AL K++ ++++ + + LL+ + +L + Sbjct: 279 MFYDQVKRMIALSKRKDLPLSLMVVDIDRFRQLNQTLGHASGDELLRQVAGRLSGSLRES 338 Query: 171 PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADD 230 L + + S + R+++ + + A + + Y D Sbjct: 339 DILGRLGTDVFGILLPDVADTHQASIVARRIIDTMIMPVRVAGQDVFATAGVGIVFYPQD 398 Query: 231 WTWNDVWYAFL-----LGGMSGTVVGLLCYYLMSV----RMRPGREIMTAIKREQFYVAY 281 G + M RM ++ A R +F + Y Sbjct: 399 GNDVHELVTNAGIAGRHAKNLGRNSYQYYFPGMHEGARDRMFLEIDLRHATLRNEFVLYY 458 Query: 282 QPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAE 341 QP R+TG+E LLRW+HP G + PD FI E +IV + + + E R A E Sbjct: 459 QPKASCADGRITGVEALLRWQHPERGIVSPDQFIPLLEETGLIVQVGRWVLEEACRQAVE 518 Query: 342 LEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-AT 400 + +N++ L +E+ D+ L + + LEITE ++ + A Sbjct: 519 WQAAGLNIPSVSVNLSARQLQAETLLTDVAATLEKTGLNAACLDLEITESMLMDNADMAI 578 Query: 401 QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVL 460 Q + L +GV I++DDFGTG+S+L YL+RF LD +K+DR F+ I ++ + + AV+ Sbjct: 579 QTLSALKKMGVTISLDDFGTGYSSLAYLKRFPLDAIKVDRSFVQDIAADSDDASITRAVI 638 Query: 461 TLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 T+A L + VAEGVETPEQ L + +QGY+ SRP+P L Sbjct: 639 TMAHHLKLKVVAEGVETPEQLALLISHQCDVIQGYFFSRPMPASGMTELL 688 >UniRef50_A1K5F7 EAL/GGDEF-domain containing signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5F7_AZOSB Length = 576 Score = 488 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 103/506 (20%), Positives = 181/506 (35%), Gaps = 32/506 (6%) Query: 19 AGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQ 78 + + S L H E+ ++ + + +D + K DRL P+ + Sbjct: 78 LAALDVLKSSGLDLPFIIHSGEISDRQAVSAMYEGVDDFI--AKGDYDRLLPVIER---E 132 Query: 79 ANPELTARAAFSMNVRTFVLVK--------DKKTFCSSATGEMDIPLNELIPALDINKNV 130 RA + R LV + FC+ I Sbjct: 133 LRGLHARRAVRQADERIRELVNFDVLSALPNHNLFCTKVGD--------WIADAGAQAAG 184 Query: 131 DMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIG 190 + ++ + + N +L+ G A L L + ++ Sbjct: 185 AVLVVDVDRFMRINASFGYDTGNVILRQLGERLAAGLAADVMLARLGSDRFGVFLPGVVE 244 Query: 191 NTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV- 249 + L+ E M + + + D ++ Sbjct: 245 REQAEIAARWLLRAFEQPFMKNDIELFLTASVGIAMVGGDGADVFELLMNAEAAVARVKC 304 Query: 250 --------VGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRW 301 + R+ E+ A++R + + YQP+VD V E L+RW Sbjct: 305 QGGNGVRCYDRAMNAASAERLTLEAELRHAVERGELRLFYQPIVD-PDGTVRAAEALVRW 363 Query: 302 RHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHL 361 +HP G + PD FI A+ +I + + + +N++ Sbjct: 364 QHPEQGLLAPDRFIPLADETGLITEIGAWVLTEACYQGRCWHDAGHERFRVSVNVSAVQF 423 Query: 362 HSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQ-LFAWLHSVGVEIAIDDFGT 420 +++ L + LEITE ++ + E+ + L ++GV IA+DDFGT Sbjct: 424 GQPRLLETVREALRGSGFPPACLTLEITESSLMSDVESAAGMLRSLKNMGVRIAVDDFGT 483 Query: 421 GHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQ 480 G+S+L YL R +D +KID+ F+ + + ++ A++ LA L + TVAEGVET EQ Sbjct: 484 GYSSLSYLRRLPIDTVKIDKSFVRDVSNNGEDAAIVRAIIALAHSLGLGTVAEGVETAEQ 543 Query: 481 ARWLSERGVNFMQGYWISRPLPLDDF 506 L G + QGY RP+P + F Sbjct: 544 EATLRREGCDSFQGYRYGRPVPAEVF 569 >UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLU1_AGRRK Length = 766 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 107/483 (22%), Positives = 180/483 (37%), Gaps = 58/483 (12%) Query: 44 DTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTFVLVKD 101 +L L +R Q A+ + A +++ F LV D Sbjct: 319 RHRAEARIGFLAD-HDPLTGMANRALLDRKLTFAMQTADSTRSEVALAFLDLDNFKLVND 377 Query: 102 KKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGV 161 S ++ + I L ++ Sbjct: 378 S--LGHSVGDQLLKIVASRISELTSDQG-------------------------------- 403 Query: 162 FAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIP 221 SL E + + + L S+ + + Sbjct: 404 ----------SLARIGGDEFVIILEQMDLESCLDRLSA-IREAVTRPIVLNDIELRVTCS 452 Query: 222 LTVRLYADDWTWNDVWYAFLLGGMSGTV---------VGLLCYYLMSVRMRPGREIMTAI 272 + V Y + A M ++ ++ E+ A+ Sbjct: 453 IGVASYPSHGSTAGELLASADMAMYRAKELGRDGIALFTSAMTAIVRKKLSRTDELRQAL 512 Query: 273 KREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLF 332 R++F + YQP VD + R+ E L+RW H G + P FI AE +IVP+ + + Sbjct: 513 LRDEFVLHYQPQVDVRTGRIVAAEALIRWNHSSEGLVYPGDFIALAEETSLIVPIGEWVL 572 Query: 333 ELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERD 392 + R A + ++ +N++ + + L+ + LEITE Sbjct: 573 KTACRQAKAWQDQGREPIRISVNVSARQFQEKRLIETVATALSESGLDPIWLELEITESL 632 Query: 393 MLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETI 451 ++K+ + L ++GV++A+DDFGTG+S+L L+RF L LKIDR FI I + Sbjct: 633 IMKDLAGSIARMQELETLGVKLAVDDFGTGYSSLSALKRFPLSRLKIDRSFIADIPHDAD 692 Query: 452 TSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 + A+++LA++L + +AEGVET EQAR+L E G N +QGY SRP+ F R L+ Sbjct: 693 DMAITAAIISLAQKLGLEVIAEGVETEEQARFLVESGCNEIQGYLFSRPVEEAQFNRMLE 752 Query: 512 KPY 514 Sbjct: 753 NNS 755 >UniRef50_C1DJP1 Cyclic di-GMP signal transduction protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DJP1_AZOVD Length = 1104 Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats. Identities = 100/487 (20%), Positives = 179/487 (36%), Gaps = 57/487 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ ++L L +R +Q +A A +++ F Sbjct: 660 DISERKRAEQRIRHLA-MHDGLTDLPNRNLIQERIEQAIVRARRGGRLLALLYLDLDRFK 718 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 ++ D + + +E + L + + +A L Sbjct: 719 VLNDG--YGHLFGDAVLKTASERLLKL-VREGDTVARLG--------------------- 754 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 E +A + + +++ + + Sbjct: 755 --------------------GDEFLILLADLEQPADADAVARKIVGSLDCPIVVQERKIH 794 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMSVRMRPGRE--------I 268 + V L+ D D M +G Y + M + + Sbjct: 795 LSGSIGVSLFPRDGETADELIDNADMAMYRAKELGRNTYQFFTRAMSLETQRRVDLEIKL 854 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A Q + YQP V + ++G E LLRW HP G + P+ FI AE +IVP+ Sbjct: 855 RGAATAGQLQLVYQPKVSLENGGISGCEALLRWHHPELGIVSPEHFIPIAEDSGLIVPIG 914 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + A V +N++ + A + + L ++ LE+ Sbjct: 915 DWVLRTACMQARAWMDAGLPPVCVAVNVSTRQFLQQDVVAWVTRTLRETGLPAARLELEL 974 Query: 389 TERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE + ++ E T L +GV+++IDDFGTG+S+L YL+RF +D LKID+ F+ + Sbjct: 975 TESLIARDIEKVTATIDQLKDIGVKLSIDDFGTGYSSLNYLKRFRVDTLKIDQSFVRNML 1034 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 TE ++ AV+ LA L +AEGVET + +R+L G + +QG++ S P+ + F Sbjct: 1035 TEMEDETIVLAVIALAHNLKFKVIAEGVETEQHSRFLCSNGCDEIQGHYFSEPVTAEAFE 1094 Query: 508 RWLKKPY 514 L+ Sbjct: 1095 TMLRAGK 1101 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats. Identities = 110/501 (21%), Positives = 192/501 (38%), Gaps = 45/501 (8%) Query: 29 CLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTAR 86 L ++ + D L ++ L +R L + Sbjct: 451 GLVTHYVATHIDITQRKAVEDQLHKLA-FYDPLTQLPNRRLLLDRLGHVLAGSTRSRNQG 509 Query: 87 AAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPA 146 A +++ F + D + + + + + + + + +A L G V Sbjct: 510 AIMFIDLDNFKALNDTQ--GHDVGDRLLAEVAQRLKS-SVRQCDTVARLGGDEFV----- 561 Query: 147 IVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNE 206 +++ A+ + +L R + Sbjct: 562 VMVQDLAADSMVVAQVEAVAGKILAALDCPYRLVFDAELGRR------------------ 603 Query: 207 LTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSV--- 260 + + L+ T D M + ++ + Sbjct: 604 -----NALNYHCTASIGITLFGAHSTNVDELLKQADLAMYQAKDSGRNAIRFFDPEMQAA 658 Query: 261 ---RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 R+ ++ A++ QF + YQP V ++ R+TG E LLRW H G +PP FI Sbjct: 659 ITSRVALEADLREAVEAGQFQLYYQPQVVGESHRLTGAEALLRWHHSRRGMVPPSEFIPL 718 Query: 318 AESQKMIVPLTQHLFELIARDAAELEKV-LPVGVKFGINIAPDHLHSESFKADIQKLLTS 376 AE +I+PL Q + E A + +N++ + F + +L Sbjct: 719 AEETGLILPLGQWVLETACAQLATWASQPEMAQLTVAVNVSAHQIRQTDFVDQVLAVLAD 778 Query: 377 LPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDY 435 A+ ++ LE+TE ++ E L S GV ++DDFGTG+S+L YL+R LD Sbjct: 779 AGANPQRLKLELTESLLVSNVEDIIAKMTLLKSRGVGFSLDDFGTGYSSLSYLKRLPLDQ 838 Query: 436 LKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGY 495 LKID+ F+N + T+ + + ++ LA+ L + +AEGVET EQ +L+E G + QGY Sbjct: 839 LKIDQSFVNEVLTDANDAAIAKMIVALAESLGLAVIAEGVETEEQRNFLAESGCHAYQGY 898 Query: 496 WISRPLPLDDFVRWLKKPYTP 516 S+PLPL F +W+ KP P Sbjct: 899 LFSKPLPLAGFEQWIGKPTAP 919 >UniRef50_A8VRH4 Putative uncharacterized protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRH4_9BACI Length = 815 Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats. Identities = 93/488 (19%), Positives = 178/488 (36%), Gaps = 57/488 (11%) Query: 38 KHEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRT 95 ++ + +L Y L + ++ Q +++ + + F++++ Sbjct: 372 AKDITESKQSEEKISFLA-YHDTLTTLPNQYKFQQDLNTLIARSSIKPKPFSIFTIDLDR 430 Query: 96 FVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPL 155 F + D + E+ + I L Sbjct: 431 FKFINDYLGY--DLGNELLTKVGTRISELLSED--------------------------- 461 Query: 156 LKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRET 215 L+ E +L +++ + + Sbjct: 462 ---------------AKLYRYGGDEFTIIHLDATPEESL-QLGNKIASAISMAFDISGFD 505 Query: 216 KIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMSV--------RMRPGR 266 + + + + D + M +G + + ++ Sbjct: 506 AFITVSIGISHHPDHGKDLNTLIKKSDNAMYFAKKMGRNNVQMFNEEINTLSTKNLKLES 565 Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 + A++R++F + YQP D + R++G+E L+RW + G I P FI AE +IVP Sbjct: 566 LLYKALERDEFLLHYQPQYDAKTNRISGVEALIRWDNEELGMISPADFIPLAEETGLIVP 625 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 + + + + + +N++ + I K+L + L Sbjct: 626 IGEWVMRTACHQNKAWQDEGLPPMVMSVNLSIRQFYQPDLPQVIGKILEESGMAPELLEL 685 Query: 387 EITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 EITE + A + L +GV IAIDDFGTG S+L +L++F LD+LKIDR F++ I Sbjct: 686 EITESMAMHADSAISILKQLKQLGVRIAIDDFGTGFSSLNHLKKFPLDHLKIDRSFVDDI 745 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 + ++ ++ LA LN+ VAEGVE Q ++L + + QG+ S+P+ D Sbjct: 746 CLGSEEQDIVKTIIMLAHNLNLRVVAEGVENDLQQQFLKDHRCDVFQGFHFSKPVIRDAI 805 Query: 507 VRWLKKPY 514 L+K Sbjct: 806 PELLRKQT 813 >UniRef50_Q3A6S1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A6S1_PELCD Length = 947 Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats. Identities = 98/487 (20%), Positives = 179/487 (36%), Gaps = 57/487 (11%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTF 96 ++ + K L Y+ L +R A+ A + V Sbjct: 494 RDISSQRQVEREIKQLA-YYDSLTGLPNRALFEDRFRRVLTTADRAGKMAALLFIGVDNL 552 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 + D T + ++ + + + A+ N Sbjct: 553 NSIND--THGHTYGDKLLKVIGQRLVAVAQNG---------------------------- 582 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 ++ + + + T + +++ ++ Sbjct: 583 --------------ATVVRWEGDKFVVLLPGLSDAETADTVARQILQSIAEPCEVDDQSF 628 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMSG---TVVGLLCYYLMSV------RMRPGRE 267 + +Y D M C + + R Sbjct: 629 FVTASIGGAVYPQHGADGDKLLKNADMAMYASKELGRNTYCTFTEEMNRRVLERSGLEHN 688 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A+ RE+F++AYQP VD +V G E LLRWRH G I P FI AE +I+P+ Sbjct: 689 LRLALAREEFFLAYQPQVDQATGKVLGSEALLRWRHAEKGMISPGQFIPLAEESGLILPI 748 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + + + ++ +N++ F + ++L + LE Sbjct: 749 GHWVLQTACAQNKAWQLAGYPPMRIAVNLSARQFQQPDFFDQVAQVLKDTELDPRYLELE 808 Query: 388 ITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE ++ + + A + L +GV IAIDDFGTG+S+L YL+ F +D +KI + F+ I Sbjct: 809 LTESLLMADADVAVETLRALRDLGVGIAIDDFGTGYSSLSYLKTFPIDRIKIAQEFVLDI 868 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 + + +++ V+ +A L + VAEGVET Q +L R MQGY+ RP+P ++F Sbjct: 869 TRDPGDAAIVETVIAMAHGLGLDIVAEGVETEAQLEFLRARRCQVMQGYYFGRPMPAENF 928 Query: 507 VRWLKKP 513 + +L + Sbjct: 929 IEYLSEN 935 >UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK65_9PROT Length = 1327 Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats. Identities = 103/484 (21%), Positives = 184/484 (38%), Gaps = 58/484 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ D + L +RL Q+A+ + T A F +++ F Sbjct: 887 DITELRRAHDQLDHQAH-HDPLTGLPNRLLLGDRLHKALQRAHRDETGLAVFFIDLDRFK 945 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 + D T + + + L Sbjct: 946 NIND--TLGHQVGDRVLCEVAWRLGRL--------------------------------- 970 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 + + ++ E + + TA+S + +++NV + + + V Sbjct: 971 ---------MRESDTVGRLGGDEFLIVIEDVGEPTAVSHIAEKILNVLQASPVTVEHEFF 1021 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMS--------VRMRPGREI 268 G + + ++ D + M G Y + R++ ++ Sbjct: 1022 VGASIGISVFPQDGADAETLMKNADVAMYRAKERGRNTYEFFTKDLTQTSLARLQMETDL 1081 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 AI+R + V QP +V G E L+RW P G + P FI AE +IVP+ Sbjct: 1082 RRAIERGELRVYLQPQFSLATGKVVGAEALVRWLRPQQGLVLPGEFIKLAEESGLIVPIG 1141 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + A A +N++ + ++ L + LEI Sbjct: 1142 EWVQGTAACQWATWVAAGLAPGVLSVNVSGVEFARGRIQQTARRTLELSGLPARFLELEI 1201 Query: 389 TERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE ++ E + Q+ L ++G+ + IDDFGTG+S+L YL+R L+ LK+D+ F+ + Sbjct: 1202 TESAIMSHAENSVQVLDNLRAMGISLVIDDFGTGYSSLAYLKRLPLNKLKVDQSFVRGLP 1261 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF- 506 +T + AV+ L L + +AEGVET Q +L+ G + MQGY RP+P DD+ Sbjct: 1262 NDTEDCAIARAVIALGHSLQLTVIAEGVETEAQREFLTGEGCDEMQGYLRGRPMPFDDYH 1321 Query: 507 VRWL 510 R+L Sbjct: 1322 ARFL 1325 >UniRef50_C9Y8E7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8E7_9BURK Length = 633 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 105/513 (20%), Positives = 190/513 (37%), Gaps = 58/513 (11%) Query: 15 TCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQP--LT 72 ++ G +I L +Q + + ++ YL L +R+ L Sbjct: 158 ILLINGFLIWFLTYDMQNALVRLRAQIARFHASEKNLTYLAQ-HDGLTRLPNRILGNELL 216 Query: 73 LDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDM 132 + + A E A +++ F V D SA + + + + + Sbjct: 217 TEAMRVAAEEKNLVAMLFVDLDNFKDVNDS--LGHSAGDDFLVQVAQRLRE--------- 265 Query: 133 AILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNT 192 ++ + + E G+ + Sbjct: 266 ---------------------------------SVRQSDIVCRQGGDEFLIGLTGLQHPD 292 Query: 193 ALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV--- 249 A++ S ++ + +A + + LY D M Sbjct: 293 AVAKVSQDILQKMQAPFQLRGIEVLASCSIGIALYPQHGNSFDELMRHADLAMYHAKEAG 352 Query: 250 VGLLCYYLMSVR------MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRH 303 ++ +R + + A+ +E+F + YQPV D + R+ G E L+RW++ Sbjct: 353 RNTFRFFSEDIRSSVTESLHLISSLRQAVTQEEFVLHYQPVYDLHSGRLLGAEALVRWQN 412 Query: 304 PVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHS 363 P G + P FI AE +IV + Q + R + + +N++P Sbjct: 413 PKLGMVSPGLFITLAEKSGLIVDIGQWVLTEACRQMQAWRQQGATDLFVSVNLSPVQFSR 472 Query: 364 ESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEA-TQLFAWLHSVGVEIAIDDFGTGH 422 + +A I + L Q+ LE+TE ++ + E + G+ ++IDDFGTG+ Sbjct: 473 GNVEAVIAQALRETGLDPRQLELEVTESTLIHDTEKFITTLGRIQHSGIRMSIDDFGTGY 532 Query: 423 SALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQAR 482 S L YL+RF + LKID+ F+ + ++ A++ LAK L + AEGVE Sbjct: 533 SNLSYLQRFPVHKLKIDQSFVRRLMQGQKDVAMVSAIIHLAKSLQLTVTAEGVENEATRE 592 Query: 483 WLSERGVNFMQGYWISRPLPLDDFVR-WLKKPY 514 L+ G + QGY +RP+P DF WL +P Sbjct: 593 ALTRMGCDQAQGYLFARPMPAKDFEAYWLARPT 625 >UniRef50_Q2BNG9 PAS sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNG9_9GAMM Length = 948 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 106/509 (20%), Positives = 187/509 (36%), Gaps = 58/509 (11%) Query: 18 VAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQP--LTLDT 75 ++ + + V V ++ ++ L + +RL + Sbjct: 480 ISWLHSVLSVPGGDIRVLTIGLDLTERMHAEKRLVWMAN-HDPLTALPNRLLFTEKVDEA 538 Query: 76 CQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAIL 135 ++ + A ++ +F V D E+ E I + N V Sbjct: 539 IKRYQEKNGILAILFCDLDSFKDVNDS--LGHPVGDELLQQAAERIQNIICNDGV----- 591 Query: 136 PGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALS 195 L E + + Sbjct: 592 -------------------------------------LARLGGDEFTVLLEGRANIREIE 614 Query: 196 TFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLC 254 + ++ + + I + + L+ D M G Sbjct: 615 NVAQHIIRAFRQSFFIDGYEIFSTISIGISLHPDHGDNVTSLIQHADVAMFDAKESGKNQ 674 Query: 255 YYLMS--------VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVA 306 R ++ A+++++F + YQP +DT+ V G+E LLRW+H A Sbjct: 675 LRFYHDEQGSQRYERFSLVNDLRRALEKDEFRIFYQPQIDTRTGNVMGVEALLRWQHSEA 734 Query: 307 GEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESF 366 G I P FI AE Q +IVP+ + + R + G+NIA + ES Sbjct: 735 GMISPAKFIPLAEEQGLIVPIGEWVLRESCRMGKIWHDQGM-DFRIGVNIAGQQIMHESL 793 Query: 367 KADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSAL 425 +Q L + LE+TE +LK+ E +G+ +++DDFGTG S+L Sbjct: 794 MGTVQTALDESGIRPHLLDLEVTENFLLKQPEITIPKLHKFREMGLSLSMDDFGTGFSSL 853 Query: 426 IYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLS 485 YL++ ++ LKID+ F+ IG++ ++ A++ LAK L + +AEGVET EQ +L Sbjct: 854 SYLKKLPINTLKIDQSFVRDIGSDPEGEAIVKAIIVLAKSLGLEALAEGVETSEQLSYLR 913 Query: 486 ERGVNFMQGYWISRPLPLDDFVRWLKKPY 514 G + +QGY+ SRPLP ++ ++ Sbjct: 914 THGCHLIQGYYFSRPLPAEELPDFVMNQA 942 >UniRef50_B7KGZ9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KGZ9_CYAP7 Length = 897 Score = 487 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 105/526 (19%), Positives = 194/526 (36%), Gaps = 61/526 (11%) Query: 8 FGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDR 67 F + I+ GV+ +L + + HE+ L ++ D L +R Sbjct: 418 FRTRHHTWSIMEGVVKNLLNEPGVEGIVLNFHEITQRKLAEAQLRH-DALHDSLTGLPNR 476 Query: 68 --LQPLTLDTCQQANPEL-TARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPAL 124 L + T A ++V F L+ D ++ I + + Sbjct: 477 ALLMDRLTQAINREKGRFYTHFAVLFLDVDRFKLLNDS--LGHLVGDQLLISFANCLKKI 534 Query: 125 DINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDG 184 T ++ E Sbjct: 535 R------------------------------------------RFTDTIARLGGDEFVIL 552 Query: 185 VALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGG 244 + + + R+ + + + + + + + Sbjct: 553 LEDLSEVGQAIKVAQRINEILSSSFLIDDQEIFITASIGIAFSNSSYEHPSQILRDADTA 612 Query: 245 MSGTV---VGLLCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGL 295 M G + S+ +++ ++ AI+R++ V YQP++ + + G+ Sbjct: 613 MYYAKNNGRGKYQVFDSSMHIHALKQLQLENDLRRAIERDELVVYYQPIICLKNGTLIGV 672 Query: 296 EVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVL--PVGVKFG 353 E L+RW+HP G I P FI AE +I+ L Q + + ++ + Sbjct: 673 EALVRWQHPQEGMISPAEFIPIAEETGLIIELDQWVLNTACQQMRFWQEKYSDFKSITLS 732 Query: 354 INIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVE 412 +N++ +I +LT + LEITE +++ A ++ L V Sbjct: 733 VNLSGRQFSQPDLIKNIDNILTQNKLEKQYLKLEITETVLIENPNSAAEMLEQLIERKVT 792 Query: 413 IAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVA 472 + +DDFGTG+S+L YL RF LD LKIDR F++ I T T S ++ ++TLA+ L + +A Sbjct: 793 VCLDDFGTGYSSLGYLHRFPLDVLKIDRSFVSNIETNTSNSTIIRTIITLARELEIEVIA 852 Query: 473 EGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQW 518 EG+ET +Q +L G ++ QGYW S P+ + + + + QW Sbjct: 853 EGIETEQQREFLQSLGCHYGQGYWFSPPVDGRELISLV-NHKSNQW 897 >UniRef50_Q3MFD3 Diguanylate cyclase/phosphodiesterase n=4 Tax=Nostocaceae RepID=Q3MFD3_ANAVT Length = 576 Score = 487 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 104/521 (19%), Positives = 206/521 (39%), Gaps = 19/521 (3%) Query: 2 FIRAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADL 61 F+ + ++ ++ + +V + ++ + + A H + + ++ YL+ L Sbjct: 46 FVISNSYSWEMTIRVLVIALFATLIGTVVTLY-ALHHLLIPVNLTSATLRDYLNN--KTL 102 Query: 62 KSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELI 121 + + L + K + +N+ + Sbjct: 103 PNLPTEFVDEAGTLMADTSQTLHKLDELIDYI-----SNYDKLTGLPNRELLRERVNQAL 157 Query: 122 PALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQED 181 K V + +L A+ N LL+ G L L + S E Sbjct: 158 SQQYSQKMVAVMVLGIDDFTGISHALEHEQSNLLLRAVGQRLTSCLAQKDILAHLSGDEF 217 Query: 182 YDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLY-ADDWTWNDVWYAF 240 I ++ S L++ + + + + D+ D Sbjct: 218 AIARVEIPSIESIVKLSQLLLSALNKPFTIKGDQIHITASIGITINQPDNLHDVDQLLQQ 277 Query: 241 LLGGMS-GTVVGLLCYYLMS--------VRMRPGREIMTAIKREQFYVAYQPVVDTQALR 291 + G + S R+ E+ A++R + V YQP++D Q + Sbjct: 278 AHVALYQAKQQGRSQHQFYSPEINAQLQERLALENELHGALQRNEIVVYYQPIIDLQTQQ 337 Query: 292 VTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVK 351 +T +E L+RW+HP G + P FI AE+ +IV + + + + ++ Sbjct: 338 ITAVEALVRWQHPTRGLVSPAKFIPIAEANGLIVEIGEWVLRTACLQNRAWQLAGLPPIR 397 Query: 352 FGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKE-QEATQLFAWLHSVG 410 +N++ + + +++ H + LE+TE ++ + Q + + L +G Sbjct: 398 MSVNLSARQFEESNLVELVGEIIQESGLHPSYLELEVTESSLMADIQRSVTILKQLRELG 457 Query: 411 VEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLT 470 V +A+DDFGTG+S+L YL+RF ++ LKIDR F+ + + ++ V +A++ LAK L + Sbjct: 458 VWLALDDFGTGYSSLNYLKRFPVNMLKIDRSFVQDVCSNPDSAAVTNAIIALAKSLQLKI 517 Query: 471 VAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 AEG+ET +Q +L +RG QGY+ P P ++ L+ Sbjct: 518 TAEGIETQQQLSYLQKRGCQEGQGYYFGIPAPANEITEILQ 558 >UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAF7_MAGSM Length = 951 Score = 486 bits (1253), Expect = e-136, Method: Composition-based stats. Identities = 93/412 (22%), Positives = 183/412 (44%), Gaps = 10/412 (2%) Query: 113 MDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPS 172 D ++E+ A NK + + ++ + + LL ++ + + Sbjct: 524 RDRLIHEVGVAERSNKLMSLLLVDLDRFKIINDTLGHGVGDELLLQVSKRLIASVRKSDT 583 Query: 173 LFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWT 232 + E + + + + ++N ++ G + + ++ D Sbjct: 584 VARLGGDEFAIILPGMERAEDAAHVAETIINQLQVPFSIEENELFVGASIGIAVHGQDGD 643 Query: 233 WNDVWYAFLLGGMSGTV---VGLLCYYLMSV------RMRPGREIMTAIKREQFYVAYQP 283 D M G ++ + R+ E+ A+ ++ + YQP Sbjct: 644 DYDSLTMNADAAMFKAKESGKGTYKFFTPDMNIQNAKRLVMEAELRRAVDNQELMLHYQP 703 Query: 284 VVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELE 343 VD ++ ++ G+E L+RW HP G IPP FI AE +IVPL + + + Sbjct: 704 KVDAESRQIVGMEALVRWVHPTRGVIPPGEFIPLAEETGLIVPLGELVLTRACAQVKQWW 763 Query: 344 KVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQL 402 + V+ +N++P + + ++L + LEITE + + + + Sbjct: 764 DMGLPQVQVAVNLSPRQFQEPNLIEKVSEILRKTGFPATGLELEITESIAMHDVDNTIET 823 Query: 403 FAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTL 462 L +GV I+IDDFGTG+S+L YL++F L LKID+ F+ +G + + ++ +++++ Sbjct: 824 VKKLKDLGVRISIDDFGTGYSSLSYLKKFPLHALKIDQSFVRDLGGDDDGASIISSIISM 883 Query: 463 AKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPY 514 AK + + VAEGVET +Q +L + +QG+++S+PLP DF+ L++ Sbjct: 884 AKAMALGVVAEGVETAQQMEFLRGQECQQVQGFFLSKPLPPSDFLALLERQQ 935 >UniRef50_B9YGE9 Diguanylate cyclase/phosphodiesterase n=1 Tax='Nostoc azollae' 0708 RepID=B9YGE9_ANAAZ Length = 637 Score = 486 bits (1253), Expect = e-136, Method: Composition-based stats. Identities = 104/497 (20%), Positives = 193/497 (38%), Gaps = 59/497 (11%) Query: 34 VAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSM 91 W ++ + L +++ Y ++ L + +RL L +D + + + + Sbjct: 179 QVWIFRDITAEKLASNIINY-ESLHDILTNLPNRLLLKNLLIDALTKVSHN-HSLGVCFL 236 Query: 92 NVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWY 151 ++ F + D ++ + + I + + +A G Sbjct: 237 DLDRFKKINDS--LGHGIGDKLLQMVAQCIKK-SLRSDDIVARWGG-------------- 279 Query: 152 RNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMP 211 E + I + R+ + Sbjct: 280 ---------------------------DEFIILLPEISEMYNIDLIQERIFAAFKQGFKI 312 Query: 212 VRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSG-TVVGLLCYYLMSVRMR------- 263 + + LY + +S + G Y + + Sbjct: 313 DNYHLNISPSIGIALYPQHGEDGETLIKNAEAALSFVKLQGRNNYKVYQAAINSQATELF 372 Query: 264 -PGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQK 322 + A++R++F V YQP V++ +T +E LLRW+HP G IPP FI AE Sbjct: 373 ILENSLYNALERQEFKVYYQPQVNSSTGEITKMEALLRWQHPELGLIPPATFIPIAEETG 432 Query: 323 MIVPLTQHLFELIARDAAELEKVL-PVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHH 381 +I+P+++ + + ++ L + +N + + ++++L H Sbjct: 433 LILPISEWVLKTACLQNKAWQQTLNLSSLSVAVNFSGRQFQQPNLVGIVEQVLCETKLAH 492 Query: 382 FQIVLEITERDMLKEQEATQ-LFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDR 440 + LEITE +++ E TQ + L +GV I+IDDFGTG+S+L YL+ F++ LKID+ Sbjct: 493 RYLELEITETVAMQDVELTQKILRQLDEMGVTISIDDFGTGYSSLSYLKDFSIHALKIDQ 552 Query: 441 GFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRP 500 F+ + + + + A+++LA LN+ VAEGVET EQ L MQGY+ S P Sbjct: 553 SFVQDLANKDHQTAITTAIISLAHGLNLSVVAEGVETQEQLNALRILQCEIMQGYFFSHP 612 Query: 501 LPLDDFVRWLKKPYTPQ 517 L ++ R L + Sbjct: 613 LSAEEATRMLTAYQPHR 629 >UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Caulobacteraceae RepID=B8H3B9_CAUCN Length = 748 Score = 486 bits (1253), Expect = e-136, Method: Composition-based stats. Identities = 105/485 (21%), Positives = 181/485 (37%), Gaps = 61/485 (12%) Query: 38 KHEVKYDTLITDVQKYLDTYFADLKSTTDRL--QPLTLDTCQQANPELTARAAFSMNVRT 95 ++ L Y L +R+ Q + + + + A A +++ Sbjct: 262 SEDIAERKRAEAQIARLAHY-DPLTDLPNRVLFQKSLGEALARRSRKGDALAVHFVDLDR 320 Query: 96 FVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPL 155 F V D T + E + Sbjct: 321 FKTVND--TLGHPLGDALLKIAAERLRGC------------------------------- 347 Query: 156 LKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRET 215 + ++ E + + + ++R++ Sbjct: 348 -----------VREGDTVARLGGDEFAIVQTGLDDSNGATRLAARIVEAMAAPFDLQGHH 396 Query: 216 KIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYL------MSVRMRPGR 266 + G + V L D D + G ++ + R Sbjct: 397 VVIGASVGVSLAPTDGDDADELLKKADMALYRAKADGRGAYHFFERAMDEQLQARRALEL 456 Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 ++ A++ +F + YQP+ RVTG E LLRWRHP G + P FI AE +IV Sbjct: 457 DLRRALQAGEFELFYQPLYHLGDERVTGCEALLRWRHPERGMVSPADFIPLAEEIGLIVQ 516 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 L + + +AA P V+ +N++P + L + ++ L Sbjct: 517 LGEWVLRRACAEAANW----PEHVRLAVNLSPAQFRDRGLVRTVVSALAASGLPAQRLEL 572 Query: 387 EITERDMLKEQEA-TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 EITE +L++ +A + L ++GV I++DDFGTG+S+L YL F D +KID+ F+ Sbjct: 573 EITESVLLQDSQANMTMLHDLKALGVRISMDDFGTGYSSLSYLRSFPFDKIKIDQTFVRD 632 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 I ++ ++ AVL L + ++T AEGVET Q L ++G +QGY+ISRP P + Sbjct: 633 ILHDSDAMAIIKAVLDLGASMGVVTTAEGVETQAQLDALRQQGCAEIQGYFISRPAPASE 692 Query: 506 FVRWL 510 + L Sbjct: 693 IAKML 697 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 486 bits (1253), Expect = e-136, Method: Composition-based stats. Identities = 94/426 (22%), Positives = 182/426 (42%), Gaps = 16/426 (3%) Query: 108 SATGEMDIPL------NELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGV 161 S TG + L + A K + + L + + LL+ Sbjct: 210 SLTGLANRRLFVDRLEQAVKAASRDRKQIALLFLDLDQFKRINDTLGHDAGDSLLQTVAQ 269 Query: 162 FAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIP 221 + ++ E + I+ +++ +++++ + + I Sbjct: 270 RLKNCVRAKDTVARLGGDEFTVLLTDIVDTFSVTPVATQILKALKEPIKLKKHEVIVSTS 329 Query: 222 LTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMSV--------RMRPGREIMTAI 272 + V L D DV + G Y+ + ++ +E+ A+ Sbjct: 330 IGVTLAPTDGANADVLMKNADLALYRAKEHGRDRYHFYTEELNAHALKQLLMEQELRHAL 389 Query: 273 KREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLF 332 + E+F + +QP V+ ++ +E L+RW HP G + PD+FI+ AE +I P+ + + Sbjct: 390 QFEEFTLGFQPQVNLTTGKIVSVEALIRWHHPSKGLVMPDSFISVAEETGLINPIGRWVL 449 Query: 333 ELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERD 392 + L+ + +K +N++ + I++ L + LE+TE Sbjct: 450 KNACMQMKMLQDLTGSAIKIAVNLSARQFDDPKLEQSIEEALNETGLEPEWLELEVTESM 509 Query: 393 MLKEQEAT-QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETI 451 ++ + +A L GV +AIDDFG+G+S+L YL++ ++ LK+DR F+ I ++ Sbjct: 510 LMGDIQAVTNKLKRLRQTGVSLAIDDFGSGYSSLSYLKKLPVNALKVDREFVRDIPEDSN 569 Query: 452 TSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 + A++ +A +L + VAEGVET EQ +L +F QGY+ S+PL +D +L Sbjct: 570 DMEITSAIIAVAHKLQLKVVAEGVETAEQKEYLLANQCDFAQGYFFSKPLSFEDLYIYLN 629 Query: 512 KPYTPQ 517 + Q Sbjct: 630 EHKFKQ 635 >UniRef50_C5D6R4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacillaceae RepID=C5D6R4_GEOSW Length = 951 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 92/484 (19%), Positives = 186/484 (38%), Gaps = 57/484 (11%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDRL--QPLTLDTCQQANPELTARAAFSMNVRTF 96 ++ + YL Y+ +R + + ++A + A +++ F Sbjct: 508 RDITEQKKAEEKISYLA-YYDPDTHLPNRTKFMEIIDEQLEKAKQKNRKLAVVFIDLDRF 566 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 LV D A E+ + + I + Sbjct: 567 KLVNDSI--GHYAGDEILKQVVQRIQHVLPAG---------------------------- 596 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 L + + + + ++ + + + Sbjct: 597 --------------AYLGRFHGDKFCLLLTERTDSEGVFKTAAHISKEVMKPIVYENKEF 642 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVV---GLLCYYLMSV------RMRPGRE 267 I + + Y +D ++ + +Y + R+ R Sbjct: 643 FITISIGISFYPNDGVDKHSLLKNADIALNKAKQSGGNRIQFYSAKMNEETLYRLEMERY 702 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A++ ++F++ YQP++D + G E L+RWRHP G + P+ FI+ AE +I + Sbjct: 703 LRKALENQEFFLCYQPIIDIHKGVIVGNEALIRWRHPKLGLVRPNEFISLAEETGLIHEI 762 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + + + + +++ + +N++ E F D+++ L + LE Sbjct: 763 GRWVLVTACKQTKKWQQLWNQQLFVSVNVSARQFQHEGFIDDVKQALEQSQLSPNCLHLE 822 Query: 388 ITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE ML+ + Q+ L +GV IAIDDFG+G+++ YL+ ++ LKIDR F+ + Sbjct: 823 LTENSMLRNLHYSIQVMKELQQLGVGIAIDDFGSGYASFSYLKNLPVNILKIDRSFVEQM 882 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 T + ++ A++T+ L + TVAEGVET EQ L + QGY + RP+ ++ Sbjct: 883 HTNSSDIAIVKAIITMGHGLGLKTVAEGVETVEQLELLKMLHCHHAQGYALYRPVTAEEL 942 Query: 507 VRWL 510 ++ Sbjct: 943 STYM 946 >UniRef50_B8GPC4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPC4_THISH Length = 761 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 114/527 (21%), Positives = 191/527 (36%), Gaps = 69/527 (13%) Query: 12 LLLTCIVAGVMIAILVSCLQFLVAWHK------------HEVKYDTLITDVQKYLDTYFA 59 ++L IV ++ I ++ H EV+ + L Y Sbjct: 275 VILAGIVLLTLLVIGLALFLRQQIRHHTRALRAQSEALAQEVREREQAQERLNELA-YSD 333 Query: 60 DLKSTTDRL--QPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPL 117 L +R Q + A A +++ F V D +A + + Sbjct: 334 SLTHLPNRTLFQDRLHQAMEYAKRHERLIALLFIDLDDFKRVNDS--LGHAAGDRLLQEI 391 Query: 118 NELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSS 177 + L T +L Sbjct: 392 ARRFGRV------------------------------------------LRETDTLARLG 409 Query: 178 RQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVW 237 E + I TF +L++ M ++ + + LY D T Sbjct: 410 GDEFTVILTDIQRPEDAVTFVRKLLDTLRAPFMLGEQSITMSASIGITLYPSDDTAEADL 469 Query: 238 YAFLLGGMS---GTVVGLLCYYL------MSVRMRPGREIMTAIKREQFYVAYQPVVDTQ 288 M +Y + R+ ++ A+ QF + YQP+V Sbjct: 470 LKDADTAMYQAKSRGKNTFDFYAPELTQSVRARLTMEGDLRAALDTNQFLLHYQPIVSLN 529 Query: 289 ALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPV 348 V GLE L+RW+HPV G +PPD FI AE +I + + + A+ + Sbjct: 530 GAGVQGLEALVRWQHPVRGLVPPDEFIPVAEDSGLIHEIGDWVIDAACAQLAQWDARGLS 589 Query: 349 GVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLK-EQEATQLFAWLH 407 + IN++P + + I + L ++ LEITE +++ + + L Sbjct: 590 HLTLAINLSPVQFRRDGLVSRIARRLRQHSIASERLHLEITESLLMEQNRHVAETLQTLD 649 Query: 408 SVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLN 467 ++G+ + IDDFGTG+SAL YL F + LK+DR F+ + T ++ A++ +A L Sbjct: 650 AMGIGLCIDDFGTGYSALNYLRHFPIRQLKVDRSFVEDMLHAEDTRALVRAIVLMAHALR 709 Query: 468 MLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPY 514 + VAEGVE Q L E G + +QGY +SRPLP + W++ Sbjct: 710 LEVVAEGVEEKSQLELLREMGCDQVQGYLLSRPLPAAEIPGWIESQR 756 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 485 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 96/495 (19%), Positives = 177/495 (35%), Gaps = 58/495 (11%) Query: 28 SCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRL--QPLTLDTCQQANPELTA 85 + ++ L Y L +R+ Q A Sbjct: 371 AGAIRYFIGSFRDITEQVEAQRHILRLAHY-DVLTDLPNRVLFQDRLERAVVHALRHDRQ 429 Query: 86 RAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKP 145 A +++ Sbjct: 430 AALLFLDL--------------------------------------------DGFKKVND 445 Query: 146 AIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVN 205 + + LLK V + +T ++ E + I S + +++ Sbjct: 446 TMGHRAGDDLLKEVAVRLRGCVRMTDTIARLGGDEFTVILDEISAANDASMVADKILASL 505 Query: 206 ELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS---GTVVGLLCYYLMSV-- 260 G + + L+ D T D M G +Y + Sbjct: 506 HAPIFIDGRDVFIGTSIGISLFPIDGTSGDELLKHADTAMYQAKAAGKGRFNFYSAEMTK 565 Query: 261 ----RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFIN 316 R+ + A++ QF V YQP + RV+G E L+RW+HP G I P FI Sbjct: 566 REEHRLELETALRQAVEEGQFQVHYQPQKNLATNRVSGFEALVRWQHPRLGMISPVDFIP 625 Query: 317 FAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTS 376 AE +I + + R + + +N++ + + ++++L Sbjct: 626 LAEEMHLIDRIDMFVMRQACRKGRQWRDQGY-DICMAVNLSGVNFSRDDLPEQVRQVLED 684 Query: 377 LPAHHFQIVLEITERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDY 435 + LEITE ++ E + ++ L ++GV++AIDDFGTG+S+L YL+R ++ Sbjct: 685 TGFPAENLELEITESFVIDLEVDQREVLQRLRALGVKLAIDDFGTGYSSLSYLKRLPVNT 744 Query: 436 LKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGY 495 LKIDR F+ I ++ ++ +++ +A L + VAEG+E +Q L + + +QGY Sbjct: 745 LKIDRSFVRDIARDSRDMMLVSSIIGIAHSLGLKVVAEGIEERDQLAILLSQECDEIQGY 804 Query: 496 WISRPLPLDDFVRWL 510 I++P+P + +L Sbjct: 805 LIAKPMPAEQAGIFL 819 >UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TX60_9PROT Length = 961 Score = 485 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 96/450 (21%), Positives = 174/450 (38%), Gaps = 30/450 (6%) Query: 83 LTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVP 142 ++ +D+ F + PL EL L + VD AI Sbjct: 510 QNRLLVVVRDITERKNAQDRLEFMAH-----HDPLTELPNRLLLQDRVDRAIALAEREGR 564 Query: 143 NKPAIVIWYRNPLLKNSGVFAALNLNLT--------------PSLFYSSRQEDYDGVALI 188 + + N + A L ++ E + + Sbjct: 565 RVALMFLDLDQFKTVNDSLGHAAGDRLLKDVAWRLRQCVRESDTIARLGGDEFVIVLNAV 624 Query: 189 IGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGT 248 + + ++ + + + + + ++ +D D M Sbjct: 625 RDADGVVEVAEKIHKSVAPPITIEGQEVTSTLSMGIAMFPEDGHDFDTLMKKADAAMYHA 684 Query: 249 V-VGLLCYYLMSVRM--------RPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLL 299 G Y + RM + A++R +F + +QP V V G E L+ Sbjct: 685 KESGRSTYRFFAARMNADAVAHLALRSGLHRALERGEFQLYFQPQVSLTGGAVVGAEALI 744 Query: 300 RWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPD 359 RW HP G + P FI AE +IVP+ + R AA + + +N++ Sbjct: 745 RWNHPERGLVSPAEFIPVAEDSGLIVPMGDWVLRQACRQAALWQ-AGGHALTMAVNLSAL 803 Query: 360 HLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLF-AWLHSVGVEIAIDDF 418 + +++ L + LE+TE M+++ EA L ++GV+++IDDF Sbjct: 804 QFRRGDLERAVREALEESGLAPHSLELELTESIMIQDHEAVMDMTRRLGALGVQLSIDDF 863 Query: 419 GTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETP 478 GTG+S++ YL+RF +D LKID+ F+ + T+T + + A++ +A L + +AEGVE Sbjct: 864 GTGYSSMAYLKRFAVDKLKIDQSFVRDVHTDTDNAAITQAIIQMAHSLKLEVIAEGVEVT 923 Query: 479 EQARWLSERGVNFMQGYWISRPLPLDDFVR 508 E +L + G + QG+ RP+ F + Sbjct: 924 EVVEFLRDHGCDLAQGFLYGRPMTAQRFEK 953 >UniRef50_A0PXI0 Nitrogen fixation positive activator, putative n=2 Tax=Clostridium RepID=A0PXI0_CLONN Length = 591 Score = 485 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 96/470 (20%), Positives = 172/470 (36%), Gaps = 35/470 (7%) Query: 68 LQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDIN 127 + + T +V + + + +P ++ Sbjct: 121 SLSILGKSIISQRDLQTYYIVIFEDVTKLKESERDINY------LKKYDILTQLPQKELF 174 Query: 128 KN---VDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPS------------ 172 ++ L GT + + + N + L Sbjct: 175 VKNLKDEIIRLEGT--GKLVGVVTLGLDDFKFINEAMGHLSGDRLLRDVTRRLKTLDKKC 232 Query: 173 -LFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDW 231 L + E + + + + + + + + + +Y D Sbjct: 233 FLARITGDEFGIILTECEDIKDIENRINHIQQLFCKAFVINDQEVFVTASIGISIYPLDA 292 Query: 232 TWNDVWYAFLLGGMSG-TVVGLLCYYLMSV--------RMRPGREIMTAIKREQFYVAYQ 282 + + G Y + S R+ + A++ QF + YQ Sbjct: 293 LNANELIMNATSAQNFVKKNGKNDYKIYSKDISKNAYKRIEMIALLKHAVENNQFVLHYQ 352 Query: 283 PVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAEL 342 P V ++ V G+E L+RW HP G + PD FI AE +I+P+ + + R Sbjct: 353 PQVSLESGSVMGVEALIRWNHPKLGLVYPDKFIPLAEKTGLIIPMGEWVIREACRQNKIW 412 Query: 343 EKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQ 401 + +N++ E I L + + +EITE ++ + A Q Sbjct: 413 HDSGFEELVVSVNLSALQFEKEDLVDVIVDALKTSGLDPKFLEVEITEGILMVNTDKAIQ 472 Query: 402 LFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLT 461 L +GV+IAIDDFGTG+S+L YL+ F +D LKIDR FI I + + ++ Sbjct: 473 TLNDLKEIGVKIAIDDFGTGYSSLSYLKEFPIDRLKIDRSFIMGIPK-EDNGAIANIIIE 531 Query: 462 LAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 LAK L++ VAEG ET + ++L R + +QGY+ S+P+ + F L+ Sbjct: 532 LAKSLHLNVVAEGTETLDHIKFLKVRKCDTIQGYYFSKPVSGEGFTEILR 581 >UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AX01_9CHRO Length = 1409 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 99/506 (19%), Positives = 187/506 (36%), Gaps = 60/506 (11%) Query: 22 MIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQA 79 ++ + L+ ++ + ++ L +R L ++ Sbjct: 948 APLGKLADGRRLIISMAIDITERKQAEEQLRH-SVLHDGLTGLPNRTLLLDRVEQAIKRK 1006 Query: 80 NPELTAR-AAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGT 138 + A +++ F +V D ++ + + + Sbjct: 1007 QQQPNYLFAILFIDLDRFKVVNDS--LGHLVGDQLLKTIADKLQRCVRP----------- 1053 Query: 139 PMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFS 198 T ++ E + + T + + Sbjct: 1054 -------------------------------TDTVARFGGDEFVILLEDLTIWTDATKMA 1082 Query: 199 SRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-----GTVVGLL 253 R+ E + + + + + M G + Sbjct: 1083 QRITEEFESSFTLQEQEYFTSASIGITFCSSPEQTPSELVRNADIAMYRSKEAGRARYTM 1142 Query: 254 CYYLMSVR----MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEI 309 +M + + + A++RE+F V YQP+V + G E L+RW HP G I Sbjct: 1143 FDPIMHTQATQLLELETNLRLALEREEFIVYYQPIVSLMNRNLLGFEALVRWIHPEKGVI 1202 Query: 310 PPDAFINFAESQKMIVPLTQHLFELIARDAAELEKV--LPVGVKFGINIAPDHLHSESFK 367 P FI AE +I+PL + + R ++ ++ +N++ L + Sbjct: 1203 SPANFIPVAEETGLIIPLGEWVLRESCRQMKAWQEQFIGAENLRVSVNLSGKQLQQPNLI 1262 Query: 368 ADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALI 426 I +LT + LEITE ++ +E ++L + + ++++IDDFGTG+S+L Sbjct: 1263 NRIDNILTETGLEGKNLKLEITESMLMNNKEQVSELLLQMKAKKIQVSIDDFGTGYSSLS 1322 Query: 427 YLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSE 486 YL +D LKIDR F++ + +++A++TLA L M VAEGVET + R L + Sbjct: 1323 YLHYLPVDTLKIDRSFVSRMSQVGENFEIVEAIITLAHHLQMDVVAEGVETEQHLRQLQQ 1382 Query: 487 RGVNFMQGYWISRPLPLDDFVRWLKK 512 G F QGY+ S+PL + V WL++ Sbjct: 1383 LGCEFGQGYFFSKPLESEKIVSWLER 1408 >UniRef50_Q0KC83 Predicted signal transduction protein containingCHASE, PAS, GGDEF and EAL domains n=3 Tax=cellular organisms RepID=Q0KC83_RALEH Length = 1124 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 101/497 (20%), Positives = 175/497 (35%), Gaps = 57/497 (11%) Query: 27 VSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTL--DTCQQANPELT 84 + +A + +++ L +RL +A Sbjct: 655 ALAMASGIANQTGHFLLRRQAEENLRFIAN-HDALTGLPNRLMFKAEFEQALTRARASGQ 713 Query: 85 ARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNK 144 A +++ F +V D T +A + + + + Sbjct: 714 ALHVIFVDLDEFKVVND--TIGHNAGDIVLREMADRLRG--------------------- 750 Query: 145 PAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNV 204 +L + E + +T L +R+ Sbjct: 751 ---------------------SLEEVELITRFGGDEFVVLLDPKGDSTILDRTIARIQAA 789 Query: 205 NELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVV---GLLCYY----- 256 + + + + +D + M G +Y Sbjct: 790 LAPGFVVNESELRMTASIGISSFPEDGSDWQTLLKHADLAMYGAKQLGKNGYQFYCRGMS 849 Query: 257 -LMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFI 315 + R+ + A+++++F + YQP + + T +E L+RWRHP G + P FI Sbjct: 850 ASLQRRIDMESHLHRALEQDEFILYYQPRIALASGACTAVEALIRWRHPELGLVMPGDFI 909 Query: 316 NFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLT 375 FAE IV + R A V+ +N++ +S + I L Sbjct: 910 PFAEQSGAIVEIGAWALREACRQNAAWRAQGLPPVRVSVNLSARQFADKSLRLTIIDALR 969 Query: 376 SLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLD 434 + LE+TE ++++ E A+ + L GV +AIDDFGTG+S+L YL RF +D Sbjct: 970 QAGLPGNLLELELTESMVMRDAEQASSWLSRLKRTGVRLAIDDFGTGYSSLAYLSRFPID 1029 Query: 435 YLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQG 494 +KID F+ I + + AV+ L RL + VAEGVE Q +L G + +QG Sbjct: 1030 TVKIDGSFVRYIPESRSDTQITSAVIGLGHRLGLEVVAEGVENEVQLEFLRREGCDEVQG 1089 Query: 495 YWISRPLPLDDFVRWLK 511 Y+ S PLP +L Sbjct: 1090 YYFSHPLPPAKITAFLA 1106 >UniRef50_Q2S7Q5 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7Q5_HAHCH Length = 832 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 104/497 (20%), Positives = 189/497 (38%), Gaps = 44/497 (8%) Query: 32 FLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAF 89 A+ + + ++ Y L +R +A Sbjct: 360 LARAFKSMDGNLRATASK-LTFIA-YHDSLTGLANRHTFGAFLHRAIAEAARHHFRLGLL 417 Query: 90 SMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVI 149 +++ F V D A + +++ + + +++ Sbjct: 418 YIDIDGFKDVNDS--LGHEAGDLVLKEISQRLHNVLRAEDMV------------------ 457 Query: 150 WYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTD 209 + + A + E V + +S RL++ + Sbjct: 458 ---------ADMSAQYEAMEATKMSRIGGDEFAIVVNHLHSPMDISHIVKRLLDAMQAPF 508 Query: 210 MPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSG---TVVGLLCYYLMSV------ 260 + + G + + +Y +D M Y+ + Sbjct: 509 QIESHSFLLGASVGIAVYPEDGKDAHELLKCADIAMYHSKRQGRNGFEYFDTKMNHMAVE 568 Query: 261 RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAES 320 R + +I +A+++ QF + YQP V A V G E LLRWRHP G + P FI AE Sbjct: 569 RHQIISDIRSALQKGQFELYYQPQVSALAGNVMGCEALLRWRHPERGFVSPVEFIPIAEE 628 Query: 321 QKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSE-SFKADIQKLLTSLPA 379 I+ + + + E R E + ++ +NI+ S A ++ L Sbjct: 629 TGQIIEIGRWVLEEACRQCREWQAQGLDEIRMSVNISAVQFSSSTDIVAVTREALAHSGL 688 Query: 380 HHFQIVLEITERDMLKEQEA-TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKI 438 + LEITE M++ + L ++GV I++DDFGTG+S+L L +D LKI Sbjct: 689 PPDCLDLEITETAMMQSDKVGVDKLNALKNLGVSISMDDFGTGYSSLASLRDLPIDQLKI 748 Query: 439 DRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWIS 498 D+ F++ I ++ ++ A+L LAK L++ VAEGVE Q +LS + +QGY+++ Sbjct: 749 DKSFVDKINHDSQGRAIIKAILALAKELSIEVVAEGVEERTQLDFLSLHRCDLIQGYYVA 808 Query: 499 RPLPLDDFVRWLKKPYT 515 +PLP D +L++ Sbjct: 809 KPLPADGMRDFLRQHTQ 825 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 484 bits (1248), Expect = e-135, Method: Composition-based stats. Identities = 105/425 (24%), Positives = 174/425 (40%), Gaps = 25/425 (5%) Query: 117 LNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT------ 170 L L + AIL + I + N + L Sbjct: 910 LTGLPNRFLAIDRLKQAILQADRQKKRVAVMFIDLDHFKDVNDTLGHEYGDLLLQKVSQR 969 Query: 171 --------PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPL 222 ++ E + + +S++++ E + E + Sbjct: 970 LKQCLRKSDTVARLGGDEFLIILPNLRETHHCKLIASKILSSLEKPFNLLTEEAFISASI 1029 Query: 223 TVRLYADDWTWNDVWYAFLLGGMSGTVVGL---LCYYLMSV------RMRPGREIMTAIK 273 + LY DD V M G +Y M + R+R + + A+K Sbjct: 1030 GITLYPDDGNDVSVLMRNADAAMYLGKRGGRNDFKFYTMGMNEEAQSRLRIEKLLRYALK 1089 Query: 274 REQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFE 333 + +FY+ YQP++D + V G E LLRW +P G + PD FI+ AE +I L + Sbjct: 1090 KNEFYLVYQPIIDLRFQTVIGAEALLRWNNPELGRVSPDQFISIAEETGLISELGAWVIS 1149 Query: 334 LIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDM 393 ++ + + +N++P I +T + + LEITE+ + Sbjct: 1150 QACQEVVNWQTQG-SPIWVAVNLSPRQFRESKLLEIISNAITLNGITNHYLELEITEKLL 1208 Query: 394 LKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETIT 452 L++ + + LH + ++IDDFGTG+SAL YL +F + LKIDR FI I Sbjct: 1209 LEDFPGSKGIIEQLHEMDFRLSIDDFGTGYSALSYLIKFPFNRLKIDRSFIADIPHNQEV 1268 Query: 453 SPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 ++ ++ + L + +AEGVET EQA L G ++ QGY+ SRPL ++F R+L+ Sbjct: 1269 LALVKTIIAMGHGLKLQVIAEGVETTEQANILEAEGCDYAQGYFFSRPLLSEEFRRYLQS 1328 Query: 513 PYTPQ 517 PQ Sbjct: 1329 HQNPQ 1333 >UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21SH7_RHOFD Length = 658 Score = 484 bits (1248), Expect = e-135, Method: Composition-based stats. Identities = 99/470 (21%), Positives = 178/470 (37%), Gaps = 57/470 (12%) Query: 58 FADLKSTTDRLQPL--TLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDI 115 L +RL L + A + T A +++ F + +F Sbjct: 233 HDPLTRLPNRLLLLSRLQHGIELAQRDGTHLALLMLDLDRFKDI--NDSFGHLVG----- 285 Query: 116 PLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFY 175 ++ L T +V I ++ Sbjct: 286 --------------DELLQLVATRLVKQVRTI-----------------------DTVGR 308 Query: 176 SSRQEDYDGVALIIGNTALSTFSSRLMNVNELTD-MPVRETKIAGIPLTVRLYADDWTWN 234 E + + G + ++ ++ V + G + + +Y D+ Sbjct: 309 FGGDEFSVLMEDVAGAEQAARVANDIIRVLSEPYGLSSGVEVRIGASVGISIYPDNGLTP 368 Query: 235 DVWYAFLLGGMSGTV---VGLLCYYL------MSVRMRPGREIMTAIKREQFYVAYQPVV 285 ++ + G Y+ R+ + AI + + V YQP V Sbjct: 369 ELMLQQADSALYQAKIEGRGRFAYFSESLTQAARARIDIEVRLRRAITQGELRVYYQPQV 428 Query: 286 DTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKV 345 D + R+ G E L+RW+ P+ G +PP FI AE+ +I + + + Sbjct: 429 DIPSGRIVGAEALVRWQCPIEGLVPPARFITIAEATGLIGEIDDWVLRETCQQGQRWRAA 488 Query: 346 LPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLK-EQEATQLFA 404 + +N++ + ++L + LE+TE +++ E +A Q+ Sbjct: 489 GLPTLTLAVNLSAYQFLQGDISQTVAQVLRDTGYPAAFLELELTESALMQREAQAIQMLD 548 Query: 405 WLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAK 464 L ++GV +AIDDFGTG+S+L YL+ F LD LKID+ FI+ I ++ A++ +A Sbjct: 549 RLKALGVRLAIDDFGTGYSSLAYLKLFPLDVLKIDKRFIDDIPAHRDDMEIVTAIIAMAH 608 Query: 465 RLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPY 514 L + +AEGVE EQ +L +G + QGY SRP+P +F + Sbjct: 609 SLRLKVLAEGVENKEQLAYLQTQGCDQFQGYLTSRPVPAAEFEKLFLSGR 658 >UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7K0U5_VIBSE Length = 815 Score = 484 bits (1247), Expect = e-135, Method: Composition-based stats. Identities = 96/483 (19%), Positives = 190/483 (39%), Gaps = 58/483 (12%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTF 96 ++ + + + ++ L + +R L L + + A +++ F Sbjct: 378 EDISVRKAHEEKLQRMA-FYDPLTNLPNRTHLLSLLEQHIETGHKNQQTFATLFLDIDHF 436 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 + D ++ L + + Sbjct: 437 KHINDSM--GHFCGDQLLSKLAIRLQDI-------------------------------- 462 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRE-T 215 L+L + E + + + AL +++V + + Sbjct: 463 ----------LHLNAHVARIGGDEFVIILPDVHSDVALLETVGDILSVFQQPFDLANHDS 512 Query: 216 KIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMSVRM--------RPGR 266 + + LY D ++ M G Y S + R Sbjct: 513 LRVSTSIGIALYPRDGQDSETLLKNADTAMYLAKKNGRNGYAFYSPDLTDKSVSHVRIQS 572 Query: 267 EIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVP 326 + AI+++Q + +QP + + + G+E LLRW+HP G +PP FI AE +I Sbjct: 573 ALHQAIEKQQLRLEFQPQYNLEQHAIVGVETLLRWQHPEFGLVPPADFIPIAEKTGLIQS 632 Query: 327 LTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 + + + + + + +N++ L +F + +L ++ L Sbjct: 633 IGEWVLLHACQQGNAWLEQGVEFGRIAVNVSALQLQQSNFIQRLSDILNQTGFPAQRLDL 692 Query: 387 EITER-DMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 EITE ++ Q+A L +G+EI++DDFGTG+S+L YL+ ++ LKIDR F++ Sbjct: 693 EITESFLLIDPQQAIASLNQLRELGIEISLDDFGTGYSSLSYLKGLPINKLKIDRSFVSD 752 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 + + + ++ +++A++ + K L++ VAEG+ET EQA +L E+G + QGY SRP+ + Sbjct: 753 VPSNSDSNAIVNAIIAMGKTLSLKVVAEGIETQEQADYLFEKGCVYGQGYLFSRPVSAEK 812 Query: 506 FVR 508 R Sbjct: 813 LFR 815 >UniRef50_A6CPZ0 Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CPZ0_9BACI Length = 975 Score = 484 bits (1247), Expect = e-135, Method: Composition-based stats. Identities = 108/489 (22%), Positives = 184/489 (37%), Gaps = 57/489 (11%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDRLQP--LTLDTCQQANPELTARAAFSMNVRTF 96 + + YL YF +R++ L + +A + +++ F Sbjct: 526 RNITEQKKTEEKITYLA-YFDAETGLPNRIKFRELAEEFISRAKKKKRRIGVLFLDIDRF 584 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 L+ D T SA ++ I L E I Sbjct: 585 KLIND--TLGHSAGDQILIELAERIKNALPKG---------------------------- 614 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 L + ++ + N L + + ++ + + Sbjct: 615 --------------AYLGRFGSDKFTILISKNVTNEKLKQVAELIAENIQMPIIQGNQEF 660 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGL-----LCYYLMS----VRMRPGRE 267 + V +Y D T ++ M+ +++ Sbjct: 661 YIKASIGVGVYPDHGTDLADLLKNADTALNWAKSNGGDQIVFYTNEMNIMAMEKVKMESY 720 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A++RE+ Y+ YQP+V+ RV G E LLRW HP G + P FI AE +I + Sbjct: 721 LRKALEREELYIVYQPIVELNDKRVIGAEALLRWNHPYLGVVSPMEFIPLAEETGLIGSI 780 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + + A E ++ +N++ + SF +I L + + LE Sbjct: 781 GNWVLTEACKQAKEWQEKGFPDFYISVNVSANQFQQPSFTNEINHALKTSGLSAESLCLE 840 Query: 388 ITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE M++ L ++GV+IAIDDFGTG+S+L YL+ L LKID+ F+ I Sbjct: 841 LTESVMIQHSGHTIDRMEELAALGVKIAIDDFGTGYSSLGYLKHLPLHVLKIDKSFVQNI 900 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 + ++ AV + K L M V EG+ET EQ LS + QGY+ISRP+ D+ Sbjct: 901 EESSPDYAIVQAVSMMGKGLGMQVVVEGIETSEQMVLLSHLNCDLGQGYFISRPVFPDEM 960 Query: 507 VRWLKKPYT 515 +W++ Sbjct: 961 EKWMRNSQA 969 >UniRef50_B1Y5R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Burkholderiales RepID=B1Y5R0_LEPCP Length = 863 Score = 484 bits (1247), Expect = e-135, Method: Composition-based stats. Identities = 105/520 (20%), Positives = 195/520 (37%), Gaps = 63/520 (12%) Query: 4 RAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKS 63 R + V +L + ++ Y+ L Sbjct: 373 RDGGERWLEHVVKPVFSPAGQLLGLRGSY------GDITQRRQAEQQLDYVTH-RDALTG 425 Query: 64 TTDRLQP--LTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELI 121 +R Q+A + +N+ F + + SA ++ I + + Sbjct: 426 LPNRALFTEFLDQAVQKAAHSRGEFSLLFINLDGFKTINES--LGRSAGDQLLIEVARRL 483 Query: 122 PALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQED 181 +LPG ++ E Sbjct: 484 RE----------LLPG--------------------------------VDAVARVGGDEF 501 Query: 182 YDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFL 241 V + + + R++N + ++ G + + Y D + Sbjct: 502 NVIVEHDVAGLGIDLVAQRIINALSHSYQLGAQSAYIGACIGIAQYPADGPAAESLLNSA 561 Query: 242 LGGMS---GTVVGLLCYY------LMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRV 292 + +L ++ R+ ++ A+++ + + YQP VD ++ R+ Sbjct: 562 DAALHRAKAQGRNVLRFFSPELTIRARERLSLEADLRRALQQGELALHYQPQVDLRSGRI 621 Query: 293 TGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKF 352 G+E LLRWRHP G I P AFI AE +I+ L + + Sbjct: 622 VGVEALLRWRHPQRGWIAPGAFIPLAEECGLIIELGDWVLRAACEQIRHWSDAGVAPRQT 681 Query: 353 GINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDML-KEQEATQLFAWLHSVGV 411 +NI+ + S +++ L + ++ LEITE ++ + + + +L A L ++GV Sbjct: 682 AVNISAVQISSGGLLDTVRRTLAATGIAPDRLELEITESFVMFERERSFKLLADLRALGV 741 Query: 412 EIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTV 471 +++IDDFGTG+S+L YL++ + LKID F+ + + ++ AV+ + L + + Sbjct: 742 QLSIDDFGTGYSSLAYLQQLEVHKLKIDISFVRNMTRNRGNASIVKAVIAMGHSLGLEVI 801 Query: 472 AEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 AEGVE EQA L + MQGY +S+PLP+DD R L+ Sbjct: 802 AEGVEEIEQAAHLLALQCDVMQGYLVSKPLPVDDITRLLE 841 >UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF sensor n=2 Tax=Cyanobacteria RepID=B4B904_9CHRO Length = 1297 Score = 484 bits (1247), Expect = e-135, Method: Composition-based stats. Identities = 95/418 (22%), Positives = 175/418 (41%), Gaps = 27/418 (6%) Query: 116 PLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT----- 170 P+ +L + N + +A++ T ++I N + + L Sbjct: 432 PITQLPNWIIFNHRLALALVDATHGSNMLGVLIIDLNQFKRINDSLGHGVGDYLLQKASD 491 Query: 171 -------------PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 P L ++ + FS +L+N + + Sbjct: 492 RLQNCLESYSFLEPLLARWHGAGFIVLLSQLAYVDEAINFSQKLLNDFQEPFYVQSQAIY 551 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMS-------VRMRPGREIM 269 G+ + + L D ++V M G Y L ++ ++ Sbjct: 552 LGVSIGIALAPYDGDSSEVLLKNAESAMYQAKQQGKNTYQLYRPGSNQDFNKLILEADLR 611 Query: 270 TAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQ 329 AI+R +F + YQP ++ ++ G+E L+RW+HP G + P FI AE +I P+ + Sbjct: 612 KAIERNEFVLHYQPQIELATGKLIGVEALIRWQHPCLGMVSPALFIPLAEETGLICPIGE 671 Query: 330 HLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEIT 389 + ++ ++ +N++ L A I K++ + + LEIT Sbjct: 672 WALKTACHQYQIWQQAGLPKIQMAVNLSAFQLQQYDIVARIAKIIQETRINPRDLELEIT 731 Query: 390 ERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGT 448 E +++ E T + L +G++IAIDDFGTG+S+L L+ ++ LKID+ F+ + Sbjct: 732 ETTVIQNLERMTSIIEQLKQMGIKIAIDDFGTGYSSLNVLKHLPVNTLKIDKSFVQDLSN 791 Query: 449 ETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 + + + A++ L K + +AEGVET +Q +L G + QG+ ISRP+P D Sbjct: 792 DPNDAKLCQAIIMLGKAFKLEVLAEGVETIKQLEFLKNCGCDHAQGFLISRPVPPDAL 849 >UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SHX8_LEPBA Length = 818 Score = 484 bits (1247), Expect = e-135, Method: Composition-based stats. Identities = 95/486 (19%), Positives = 185/486 (38%), Gaps = 57/486 (11%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTF 96 ++ L + YL Y+ L +R + T A + ++ F Sbjct: 370 VDITERKLSEERITYLA-YYDALTGLANRTLFIDHANQALKNHKSTETLLAFYFFDIDNF 428 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 + D + + + + + Sbjct: 429 KFINDS--LGHTKGDILLQMVGARLKRVMT------------------------------ 456 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 ++ E + ++ + F+ +++++ + Sbjct: 457 ------------EVDTVARFGGDEFAILKVDVSNKSSAAEFAQKILDILSQPFHIMGRDL 504 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYL------MSVRMRPGRE 267 I + + L +D + M +Y R+ Sbjct: 505 FTTISMGIALSPNDGVTSAELLKNSDMAMYKAKELGRNNYKFYTNELILRSEKRLYIENS 564 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + AI+ E+ + +QP + T +V G E L+RW+HP G +PP FI AE +I + Sbjct: 565 LRKAIQNEELLLFFQPKISTITNQVCGAEALIRWKHPERGWVPPIEFIPVAEDSGIIERI 624 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + E R + + IN++ L ++ +Q + + +I LE Sbjct: 625 GDWVLEEACRLKKQWSEKNLPSFPLSINVSGKQLARANWSHRVQATILQYGINPEEIELE 684 Query: 388 ITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE +++ E + + F +L +G++++IDDFGTG+S+L YL++ D +KIDR F+ + Sbjct: 685 LTESSIMENPEKSIEAFEYLSELGIKVSIDDFGTGYSSLSYLKKINADVIKIDRSFVVDL 744 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 + A++ +A L + +AEGVE P Q L + G + +QGY S+PLP D+F Sbjct: 745 ELNEDDRAICKAIINMAHSLGLEVIAEGVENPAQRDLLHDLGCHMIQGYLYSKPLPEDEF 804 Query: 507 VRWLKK 512 V +++K Sbjct: 805 VVFVQK 810 >UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U882_9DELT Length = 958 Score = 484 bits (1247), Expect = e-135, Method: Composition-based stats. Identities = 113/493 (22%), Positives = 191/493 (38%), Gaps = 58/493 (11%) Query: 30 LQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARA 87 + VA + +L Y L +R+ AN T A Sbjct: 501 IANYVAVFHDISDMKHKEEQLAHHL--YHDGLTGLPNRVLVLDRLSMALSHANRTGTKVA 558 Query: 88 AFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAI 147 +++ F + D F + + + E + AL +A G Sbjct: 559 VLFLDLDNFKKINDS--FGHAQGDTLLKAVAERLVALY-RDEDTVARQGGDEF------- 608 Query: 148 VIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNEL 207 + ++++ + + L V E Sbjct: 609 -------------LVVVVDVHE---------------------EREVVDLAEGLQRVFEE 634 Query: 208 TDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMS------- 259 + + + V LY DD M G Y+L + Sbjct: 635 PFVIKGQEVFITPSIGVTLYPDDGQDPASLVKNADMAMYQSKAKGRNSYFLFTQQMSERI 694 Query: 260 -VRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFA 318 R+ ++ A+K +F V +QP VD + V+GLE L+RW P + P+ FI A Sbjct: 695 AQRLTLESDMRRALKEREFTVYFQPKVDLASGEVSGLEALVRWVKPDGIIVSPEDFIPMA 754 Query: 319 ESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLP 378 E +IVPL + + + + L+ V + +N++P E + L Sbjct: 755 EETGLIVPLGEFVLDASCKAMQVLQGVGCSALTVAVNLSPIQFGQEDLVEMVVANLERNG 814 Query: 379 AHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLK 437 ++ LEITE ++ + + + L +G+ I+IDDFGTG+S+L YL+ F + LK Sbjct: 815 LPASRLELEITESTLMTDVQSSVAQLNRLVELGITISIDDFGTGYSSLYYLKNFPISTLK 874 Query: 438 IDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWI 497 IDR FI I + + +++ V+ +A+ + + VAEGVET EQ L+ G +QGY+ Sbjct: 875 IDRSFIRDITIDDSDAKIVETVVLMARTMGIGVVAEGVETKEQLDLLATFGCATVQGYYY 934 Query: 498 SRPLPLDDFVRWL 510 SRPLPL+ + +L Sbjct: 935 SRPLPLEKIIEFL 947 >UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Pseudomonas RepID=A4Y0Z3_PSEMY Length = 960 Score = 484 bits (1246), Expect = e-135, Method: Composition-based stats. Identities = 104/488 (21%), Positives = 189/488 (38%), Gaps = 57/488 (11%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDRLQP--LTLDTCQQANPELTARAAFSMNVRTF 96 ++ + +YL Y +L +R + Q+A + A +++ F Sbjct: 513 ADLTARREAEERLRYLSHY-DELTGLANRSLFKERLHEASQRARQSGRSIALVHIDLDRF 571 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 L+ D ++ ++ + T VP Sbjct: 572 KLLNDS--LGHEVADQLLRQMSRRL----------------TQAVPE------------- 600 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 + S E + ++L+ +SRL+ L Sbjct: 601 -------------ADCIARLSGDEFAILLDAYGSLSSLARVASRLLAKLRLPMDVGGHEL 647 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVV-GLLCYYLMS--------VRMRPGRE 267 + L + L D + + G + + R++ + Sbjct: 648 VVSASLGISLLPDYAREIGALISQANMAVQHAKHLGGNTFQFFTDNLQACTLERLQLENQ 707 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + AI+ Q V YQP ++ ++ E L+RWRHP G + P FI AE +I P+ Sbjct: 708 LRKAIEEGQLEVFYQPKLNLADDQLNAAEALVRWRHPQQGLVAPGEFIGLAEETGLIAPI 767 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + + R A + ++ ++ +NI+ L + + ++++L + LE Sbjct: 768 GEFVLRQACRQARQWQQQGLAEIRVSVNISVYQLRQGNLTSLVRQVLEETGLAPQYLELE 827 Query: 388 ITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE +L + F L +GV++AIDDFGTG+S+L YL+RF + Y+KID+ FI + Sbjct: 828 LTESQLLDNVDSVVVTFRQLRELGVKLAIDDFGTGYSSLSYLKRFPVHYVKIDQTFIRDL 887 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 + + A++ +A L + VAEGVET Q +L + + +QGY ISRP+ F Sbjct: 888 SPGGEDAAITRAIIAMAHSLELKVVAEGVETQAQMDFLKSQNCDEIQGYLISRPVEAAAF 947 Query: 507 VRWLKKPY 514 L+ Sbjct: 948 AELLRAQR 955 >UniRef50_A4U1P1 Sensory box/GGDEF family protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U1P1_9PROT Length = 768 Score = 484 bits (1246), Expect = e-135, Method: Composition-based stats. Identities = 103/424 (24%), Positives = 181/424 (42%), Gaps = 24/424 (5%) Query: 114 DIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT--- 170 L L L + + AI +++ + N + +L Sbjct: 343 HDALTALPNRLLFREQIQRAIGRAKTERHGLAVLILDLDDFSHYNDVLGHDGGDHLLLAI 402 Query: 171 -----------PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAG 219 SL E + G ++ + L G Sbjct: 403 TERLMSTARGIESLARVGGDEFGFLLLTTDGGESVVELAGSLTKAMRRPFDINGHDVQVG 462 Query: 220 IPLTVRLYADDWTWNDVWYAFLLGGMSGTVV---GLLCYYLMSV------RMRPGREIMT 270 + + LY DD D M + ++ ++ R R ++ Sbjct: 463 AAIGITLYPDDGADADTLLKNADMAMYRAIEDNPNGYRFFAPTMDAELALRRRLESDLRK 522 Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 AI+R++ + YQP+VDTQ+ R+ E LLRW H G I P FI AE MI P+ + Sbjct: 523 AIQRDELELHYQPIVDTQSRRIISFEALLRWNHADDGWISPVEFIPMAEGNGMIGPIGEW 582 Query: 331 LFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITE 390 + + + +++ V +N++ L + ++K+LT ++ LE+TE Sbjct: 583 VLRRACQQMRDWDRMGIPPVPVAVNMSALQLKRQDVPMLVRKMLTEAGVPSHRLELELTE 642 Query: 391 RDMLKEQEATQ-LFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTE 449 ++++ +A Q +FA + +GV +A+DDFGTG+S+L L+RF + LKIDR F+ + + Sbjct: 643 TTVMEDADAAQRIFADIAGLGVRLAVDDFGTGYSSLARLKRFPVGKLKIDRSFVGDLAED 702 Query: 450 TITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRW 509 + + A++++ + + VAEGVETPEQ L+E G + +QG+ SR +P D Sbjct: 703 EGDAAIARAIISMGHAMGLKVVAEGVETPEQLAILAEAGCDAIQGFLFSRAVPADQAAEL 762 Query: 510 LKKP 513 L++ Sbjct: 763 LRRG 766 >UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LA87_MAGSM Length = 1070 Score = 484 bits (1246), Expect = e-135, Method: Composition-based stats. Identities = 111/482 (23%), Positives = 192/482 (39%), Gaps = 56/482 (11%) Query: 44 DTLITDVQKYLDTYFADLKSTTDRLQP--LTLDTCQQANPELTARAAFSMNVRTFVLVKD 101 T+ Q Y+ L +R + A +++ F L+ + Sbjct: 616 TQKATEEQMERLAYYDPLTKLPNRALFHERLTQSITTAKRYKRHVGVVMLDLNRFKLINE 675 Query: 102 KKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGV 161 + + I + E I Sbjct: 676 SYGYG--VGDGLLIQVAERIVER------------------------------------- 696 Query: 162 FAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIP 221 L + + + + ++ ++ L+ + + + Sbjct: 697 -----LRESDIVARIGADTFAITLVDLKQEGEITGVANNLLKQFVMPFLVNGHELMLRTA 751 Query: 222 LTVRLYADDWTWNDVWYA---FLLGGMSGTVVGLLCYYL------MSVRMRPGREIMTAI 272 + + LY D + LG V +Y + R+ +E+ TA+ Sbjct: 752 MGIVLYPTDGQDAETLLRHVENALGQAKQQGVNNYRFYSEEMSNISNKRLALEQEMHTAL 811 Query: 273 KREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLF 332 ++ F + YQP V+ Q V+G+E L+RW+H G I P FI AE +IVP+ + Sbjct: 812 EQRDFVLYYQPKVNLQRGVVSGVESLIRWQHKQKGMISPVEFIPVAEETGLIVPMGLWIL 871 Query: 333 ELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERD 392 E +A + L +N++ S + I + L + + EITE Sbjct: 872 ETACAEAKRITDYLGQPFTVAVNLSARQFQSRNLLESISETLNNSAIDPSMLEFEITESM 931 Query: 393 MLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETI 451 M+ E + + + ++GV +AIDDFGTG+S+L YL+RF ++ LKID+ FI +G ++ Sbjct: 932 MMGNVEKSIETLVAIRNMGVTLAIDDFGTGYSSLSYLKRFPINTLKIDQSFIRDLGVDSD 991 Query: 452 TSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 + ++ A++++A+ LN+ VAEG E EQ +L ERG +QGY+ SRPLP D R LK Sbjct: 992 DAAIVSAIISMAQDLNLHVVAEGAEKAEQVLFLKERGCETVQGYYFSRPLPQTDLERLLK 1051 Query: 512 KP 513 P Sbjct: 1052 DP 1053 >UniRef50_Q2B961 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B961_9BACI Length = 974 Score = 483 bits (1245), Expect = e-135, Method: Composition-based stats. Identities = 107/505 (21%), Positives = 192/505 (38%), Gaps = 57/505 (11%) Query: 23 IAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPL--TLDTCQQAN 80 I I V + + I L Y+ +RL+ + D Q+A Sbjct: 511 IPITVEGEPAGIYCIGRNITEQKRIEQEMTQLA-YYDKDTGLPNRLKFMEELDDLLQKAK 569 Query: 81 PELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPM 140 + A M++ F L+ D A ++ + I A+ + Sbjct: 570 KKKRPLAVLFMDIDRFKLINDS--LGHYAGDQILRQIAGRIEAILPPGSFF--------- 618 Query: 141 VPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSR 200 S + +A ++ ++ S+ Sbjct: 619 ---------------------------------GRFSGDKFTLILAKEADSSRVTKLSNH 645 Query: 201 LMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS---GTVVGLLCYYL 257 ++ + + LY D + M+ L YY Sbjct: 646 ILQAISSPVYYGEQEFFITGSIGASLYPGDGHEKETLMKNADIAMNRSKHQGGNRLTYYS 705 Query: 258 MSV------RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPP 311 + ++ + A+++++F++ YQP+ + + + G E L+RW HP G + P Sbjct: 706 TEMNEQTLLKLELESYLRKALQKKEFFLCYQPLTNLETGAIYGSEALIRWNHPKLGLVSP 765 Query: 312 DAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQ 371 FI AE +I + + + R E + +N++ F + Sbjct: 766 GDFIPLAEETGLINEIGHWVLQTACRQTKEWHNKGLGSLTVSVNVSVHQFQQPGFVHKVL 825 Query: 372 KLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLER 430 ++L +VLE+TE ML+ E + + L G+ +AIDDFGTG+S+L YL+ Sbjct: 826 QVLKETMLEPQFLVLELTESSMLRNMENSILVIQELQRNGIRVAIDDFGTGYSSLSYLKH 885 Query: 431 FTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVN 490 +D LKIDR FI+ + + + +++A++T+ L++ VAEGVET EQ R L + + Sbjct: 886 LPIDALKIDRSFIDNLRSGSPDIAIVNAIITMGLGLHVKVVAEGVETAEQMRLLKDLKCH 945 Query: 491 FMQGYWISRPLPLDDFVRWLKKPYT 515 F QG++I RPL + F L K Sbjct: 946 FAQGFFIHRPLGAEQFEEELGKKAA 970 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 483 bits (1245), Expect = e-135, Method: Composition-based stats. Identities = 106/487 (21%), Positives = 187/487 (38%), Gaps = 54/487 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ + + L +F L +R LQ + A +++ F Sbjct: 566 DITASKASEEEIRNLA-FFDPLTRLPNRRLLQDRLQQALASCGRSGKSGAILFIDLDNFK 624 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 + D T + + + + + + +A + G V Sbjct: 625 NLND--TLGHDIGDLLLEKVAIRLSSC-VREGDTVARIGGDEFVV--------------- 666 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 + L + ++ + S+++ + T Sbjct: 667 -----------MLEDLSDN----------ILDAAEQTESVGSKILASLNVPYQLGIHTYD 705 Query: 218 AGIPLTVRLYAD-----DWTWNDVWYAFLLGGMSGTVVGLLCYYLM----SVRMRPGREI 268 + L+ D D A +G M S R+ E+ Sbjct: 706 NSPSIGATLFNDNHNSIDELLKQADIAMYQAKKAGRNTMRFFDPRMQQSLSARLALELEL 765 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 AI+++QF + YQ VD + R G E LLRW HP G + P FI AE +IVP+ Sbjct: 766 RKAIEKDQFQLYYQIQVD-ETHRPLGAEALLRWMHPEHGLMAPAEFIPMAEETGLIVPIG 824 Query: 329 QHLFELIARDAAEL-EKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + E + L + IN++ H F +Q + + LE Sbjct: 825 WWVLETACTQLKAWEKDPLTRNLVLSINVSAKQFHQPDFVDQVQAAVDHYGIDPALLKLE 884 Query: 388 ITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE +L+ + + + L GV ++DDFGTG+S+L YL+R LD LKID+ F+ I Sbjct: 885 LTESILLENVDTTIKRMSALKKTGVGFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFMQEI 944 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 +++ ++ ++ +A+ + M +AEGVET EQ + L +G N QGY S+P+P++ F Sbjct: 945 TSDSSDMAIVSTIIAMAQSMQMGVIAEGVETEEQRQLLLRKGCNHFQGYLFSKPVPVEQF 1004 Query: 507 VRWLKKP 513 + L + Sbjct: 1005 EKLLHRG 1011 >UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=B1XZA8_LEPCP Length = 1147 Score = 483 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 104/427 (24%), Positives = 170/427 (39%), Gaps = 25/427 (5%) Query: 114 DIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT--- 170 PL L L N +D A+ +++ N L Sbjct: 718 HDPLTHLPNRLLFNNRLDQALHQAEREGRRLAVLLLDLDRFKDINDSYGHLAGDELLKYV 777 Query: 171 -----------PSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTD-MPVRETKIA 218 +L E + + + + +S L++ Sbjct: 778 AQRLTQRLRQSDTLARLGGDEFALLMHDLRHDDDAARLASELLSGLSEPWRSSEGVEVSV 837 Query: 219 GIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYL------MSVRMRPGREIM 269 G+ + + +Y D + G+ YY R+ + Sbjct: 838 GVSIGICIYPDHGRTPQTLLQGADAALYRAKGDGRGVYRYYADEMTRIARERLHIEARLR 897 Query: 270 TAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQ 329 A+ Q + YQP VD ++ R+ G E L+RW+ P G IPP FI AE+ +I + Sbjct: 898 RALADGQLLLHYQPQVDLRSGRIIGAEALVRWQDPEQGLIPPVRFIPVAEATGLIGEIGA 957 Query: 330 HLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEIT 389 + R A + +N++P H + ++L + LE+T Sbjct: 958 WVLGEACRQARAWLDAGLPALTVAVNVSPRQFHQADLATQVMQVLVETGLPPTHLELELT 1017 Query: 390 ERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGT 448 E +++ E EA Q+ L +GV +AIDDFGTG+S+L L+RF +D LKIDR FI I Sbjct: 1018 EGALMEREAEALQVLQRLRGLGVGVAIDDFGTGYSSLASLKRFPIDVLKIDRSFITDIPD 1077 Query: 449 ETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVR 508 + + A++ + L +L +AEGVET EQ +L +R + QG+ SRPLP F + Sbjct: 1078 DPDDMEIAAAIIAMGHSLGILVLAEGVETAEQLAFLQQRNCDRYQGFLRSRPLPAQAFEQ 1137 Query: 509 WLKKPYT 515 L++ + Sbjct: 1138 LLREQAS 1144 >UniRef50_C1DCZ4 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCZ4_LARHH Length = 759 Score = 483 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 103/490 (21%), Positives = 184/490 (37%), Gaps = 58/490 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLV 99 ++ D +L + L +R + + A +++ F L+ Sbjct: 311 DISRRKAAEDRLVFLAS-HDPLTRLLNRDALFRKLEDICLSGIEQSFAVLFIDLDRFKLI 369 Query: 100 KDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNS 159 D F + + + + V A+ Sbjct: 370 NDS--FGHATGDNLLRIVAARLS-----------------FVVGSNAL------------ 398 Query: 160 GVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAG 219 L E + TA+ ++RL++ + Sbjct: 399 -------------LARQGGDEFTLLLEDTGQRTAVIDMANRLLDELSQPITLENQELHIT 445 Query: 220 IPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYL------MSVRMRPGREIMT 270 + + L + + ++ + R+ + Sbjct: 446 ASIGIALAPEHGKDAATLLRHADTALYRAKDAGKNTFAFFTHTLHGLSNQRLALENALRH 505 Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 A+ R Q +AYQP +D R+ G+EVLLRW HP G++ P FI AE +I+P+ + Sbjct: 506 ALPRNQLTLAYQPQIDPHRQRLVGVEVLLRWHHPELGQVSPATFIPLAEETGLILPIGRW 565 Query: 331 LFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITE 390 + E R A + +N++ + ++ +L+ ++ LE+TE Sbjct: 566 VLETACRQLAAWDTAGFSVGHVAVNLSAHQFNDPGLTHHLKAVLSDSGLAARRLELEVTE 625 Query: 391 RDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTE 449 ++ A L L +GV ++IDDFGTG+S+L L+RF LD LKIDR F++ I + Sbjct: 626 STLINNPTAAIALMTELKELGVRLSIDDFGTGYSSLAQLKRFPLDTLKIDRTFVSGIPAD 685 Query: 450 TITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD---F 506 + +A++ +AK+L++ VAEGVET +Q +L+ G +QGY+ S PL + F Sbjct: 686 ASDLAITEAIIAMAKKLSLSVVAEGVETADQRDFLARCGSELIQGYFYSPPLAAEALHSF 745 Query: 507 VRWLKKPYTP 516 R P Sbjct: 746 SRMFDSDAPP 755 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 483 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 105/458 (22%), Positives = 183/458 (39%), Gaps = 30/458 (6%) Query: 84 TARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPN 143 T + ++ F + + + S L L +D I Sbjct: 511 THYVSIFTDISEFKRAEAQIRYLS-----YHDDLTGLPNRAYFQARLDQLIEAAARDRKQ 565 Query: 144 KPAIVIWYRNPLLKNSGVFAALNLNLT--------------PSLFYSSRQEDYDGVALII 189 +V+ N + ++ L + E +A Sbjct: 566 IALVVLDLDRFKTINDSLGHSVGDELLCQVAERIQDCTGQGDFVARQGGDEFVVILADS- 624 Query: 190 GNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV 249 + ++ +++ + T I L + LY D ++ M Sbjct: 625 DAVRAARVANAMISAIAKPAVAGGRTLIVTPSLGISLYPHDAGDSESLIKSADAAMYHAK 684 Query: 250 ---VGLLCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLR 300 ++ + R+ + A+ +F + YQP ++ + R+ GLE L+R Sbjct: 685 SLGRNTYQFFSAEMSAVATERLALENALHQALSNGEFRLYYQPQIEVCSRRLIGLEALIR 744 Query: 301 WRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDH 360 WRHP G +PP FI AE +I + + + E R E + V +N++P Sbjct: 745 WRHPEVGWVPPLRFIPLAEETGIIHRIGRWVLEEACRQQREWQAAGLCIVPVAVNLSPLQ 804 Query: 361 LHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFG 419 L + F ++ LL+ + LE+TE ++++ + + L G +IDDFG Sbjct: 805 LQKDDFPEQVEALLSGCRLAPGLLELELTETAVMRDVGRMSDMLRKLKERGTRFSIDDFG 864 Query: 420 TGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPE 479 TG+S+L YL RF +D LKID+ FI + + + A++ LAK+L++ VAEGVET E Sbjct: 865 TGYSSLGYLNRFPVDKLKIDQSFIRDVTRREDHAAITRAIIALAKQLHLKVVAEGVETAE 924 Query: 480 QARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQ 517 Q +L G + QG++ SRP+P D+ WL + Q Sbjct: 925 QLEFLERAGCDGAQGFYFSRPVPADEIAGWLSREGAVQ 962 >UniRef50_Q1JW15 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JW15_DESAC Length = 893 Score = 483 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 100/508 (19%), Positives = 186/508 (36%), Gaps = 82/508 (16%) Query: 33 LVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFS 90 A ++V + L Y+ L +R+ QA + Sbjct: 441 RFACIINDVTDSKKAQQEIERLA-YYDTLTGLPNRVLIKDRLQQAVAQAQRSRALVGVLA 499 Query: 91 MNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIW 150 +++ F + D +M +++ + + + +A + Sbjct: 500 LDLDHFKKINDSLGIG--CGDQMLKLVSQRLKG-HLRQGDSVARMG-------------- 542 Query: 151 YRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDM 210 E + I + T + +++++ Sbjct: 543 ---------------------------GDEFVILITGIKSQNDIVTAAGKILDLLAEPVT 575 Query: 211 PVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMS--------VR 261 ++ L + +Y D D+ M G Y S R Sbjct: 576 IDGHDLVSTGSLGISVYPTDADEVDLLLKHADTAMYQAKETGRNLYQFYSPDMNERAFER 635 Query: 262 MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQ 321 + ++ A+ R + + +QP +D V G E LLRW H G+I P FI AE Sbjct: 636 LFLDSDLHRALARNELELYFQPQIDLAQGHVVGAEALLRWNHATKGQISPVVFIPLAEES 695 Query: 322 KMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHH 381 +I+ + + E R A + ++ +N++ S + ++L Sbjct: 696 DLILDIGGWVIEEACRHARQWHDQGYTDLRVAVNLSARQFRS-DLPDIVARVLHETGLPA 754 Query: 382 F-------------QIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYL 428 + L A + L +G ++IDDFGTG+S+L YL Sbjct: 755 HLLELELTESLLMERPEL------------ARTILNKLRYLGNHLSIDDFGTGYSSLSYL 802 Query: 429 ERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERG 488 + F +D LKIDR F+ + + + +++A++ LA L + VAEGVET +Q ++ +RG Sbjct: 803 KHFPIDRLKIDRSFVKDLNVDPDDAIIVEAIIALAHGLRLNVVAEGVETSDQFEFMRQRG 862 Query: 489 VNFMQGYWISRPLPLDDFVRWLKKPYTP 516 + +QGY ++RP+P DDF+R+L+K Sbjct: 863 CDEIQGYVVARPMPADDFLRYLQKSKRQ 890 >UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium RepID=B0UQT2_METS4 Length = 797 Score = 483 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 94/501 (18%), Positives = 175/501 (34%), Gaps = 71/501 (14%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDRL------QPLTLDTCQQANPELTARAAFSMN 92 + + +L L +RL L + + A ++ Sbjct: 345 RDQRDRLRAEAAITHLAH-HDALTGLANRLRFNGVLAELLAERFAARRHDPAPFALLILD 403 Query: 93 VRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYR 152 + F V D T ++ + + G Sbjct: 404 LDRFKAVND--TLGHGMGDDLLR-----------RVAQRLLRVVGA-------------- 436 Query: 153 NPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRL------MNVNE 206 + E +A ++ + + Sbjct: 437 -----------------ADVVARLGGDEFAILLAGAGDAAGAGDLAAIQAAAERAIEILS 479 Query: 207 LTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLL------CYYL 257 + G + + L D + + G G Sbjct: 480 RPFVIDGHILDIGASIGIALAPQDGDTPEQLLRSADLALYGAKEEGRGRFRMFEGTMNAR 539 Query: 258 MSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 M R ++ A+ R++F + +QP VD + R G E L+RW HP G + P FI Sbjct: 540 MQARRSLELDLRRALARQEFELYFQPQVDARTGRFDGAEALIRWHHPERGLVSPGEFIPL 599 Query: 318 AESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSL 377 AE +I PL + + +A + +N++P A ++ +L Sbjct: 600 AEETGLIGPLGEWVLRTACAEARRWA----TPLPVAVNLSPVQFRDPRLAATVRGILAET 655 Query: 378 PAHHFQIVLEITERDMLKEQ-EATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYL 436 ++ +EITE +++++ + L +G+ I++DDFGTG+S+L YL RF D + Sbjct: 656 GLPGSRLEIEITEGTLMQDEHRTLAVLTELRGLGIRISMDDFGTGYSSLSYLRRFPFDKI 715 Query: 437 KIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYW 496 KID+ F+ + + ++ A+ L + L + T AEGVET +Q+ +++ G + +QGY Sbjct: 716 KIDQSFVRQTPQDRDSVAIVRAIAMLGRSLGIKTTAEGVETDQQSVFIAGEGCDQLQGYL 775 Query: 497 ISRPLPLDDFVRWLKKPYTPQ 517 SRP+P + + P P+ Sbjct: 776 YSRPVPAESIAELFRAPRAPR 796 >UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionella ferruginea ES-2 RepID=C5V4D4_9PROT Length = 925 Score = 483 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 94/487 (19%), Positives = 177/487 (36%), Gaps = 58/487 (11%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTF 96 ++ + ++L Y L +R L+ A +++ F Sbjct: 483 RDITEQKQTSAQIEHLA-YHDQLTGLPNRRLLKDRLSQAVSSVVRRDAKLALMYLDLDHF 541 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 V D A + + E + Sbjct: 542 KDVNDS--LGHGAGDVLLQIVAERLQGCVRAD---------------------------- 571 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 +L E + + G +++ + ++++ + Sbjct: 572 --------------DTLARMGGDEFVLLLNGVNGADDVASIAGKIIHELSQPMRIGNDEL 617 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMS--------VRMRPGRE 267 L + + D D + + G Y + R++ R Sbjct: 618 RITPSLGISMCPQDGRDADDLLKYADVALYQAKQQGRATYRFYTQALHDQSVERVQLERL 677 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A++R +F + YQP VD R+ G E L+RW HP G++ P FI AE +I+ + Sbjct: 678 LRHALERNEFELYYQPQVDLCDGRIIGCEALIRWNHPGMGQVSPARFIPIAEQSGLIIDI 737 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHL-HSESFKADIQKLLTSLPAHHFQIVL 386 + + A +K N++ S ++ L ++ + Sbjct: 738 GNWVMKQACHQAKRWHDQGW-DIKVSFNVSARQFMRSGELMQSLRDALAESGVDPTRMEV 796 Query: 387 EITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 E+TE +L Q ++ + ++G+++A+DDFGTG+S+L YL RF + LKIDR F++A Sbjct: 797 ELTESLLLDPQGMGEILHEIRALGIQLALDDFGTGYSSLSYLRRFPISILKIDRSFVSAA 856 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 + ++ ++ +A L M +AEG+ET Q L +G QGY S P+P +F Sbjct: 857 DNNADDAEMVKTIIGMAHNLRMSLIAEGIETNAQRDMLETQGCEVGQGYHYSCPVPATEF 916 Query: 507 VRWLKKP 513 L++ Sbjct: 917 SLLLQQG 923 >UniRef50_B8KPF2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KPF2_9GAMM Length = 609 Score = 483 bits (1243), Expect = e-135, Method: Composition-based stats. Identities = 108/495 (21%), Positives = 208/495 (42%), Gaps = 40/495 (8%) Query: 33 LVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQP--LTLDTCQQANPELTARAAFS 90 + + D +YL YF L S +R +++ T A Sbjct: 127 YMLRASNAFNSLKRQEDRLRYLA-YFDPLTSLPNRRSFNEQLNRILKRSQRLNTFSALLF 185 Query: 91 MNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIW 150 +++ F + D + + +++ + ++ ++ ++ Sbjct: 186 IDLDNFKRINDSI--GHGRGDRLLVEISKRLIN-ELREDDAIS----------------- 225 Query: 151 YRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDM 210 +S + N + E +A ++ + + R+M Sbjct: 226 ----YYSDSSAEEEHDGN--TEIARLGGDEFTVVLADVLHTDDVERIALRIMKTLSEPIP 279 Query: 211 PVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVV-----GLLCYYLMSVR---- 261 + + + +Y D + M M+ R Sbjct: 280 LQTHNPVVTPSIGIAMYPQDGEDAESLVRNADTAMYAAKADGRACFRFYNEEMNARSVEH 339 Query: 262 MRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQ 321 ++ ++ A++ +Q + YQP V+T V LE L+RW+HP G I P FI AES Sbjct: 340 LKLEEDLREAMRTDQLELRYQPQVETVTGAVVSLEALVRWKHPERGMISPADFIPVAEST 399 Query: 322 KMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHH 381 I+ L + + + +AR + + + +NI+P + I+ L Sbjct: 400 GQIIELGEWVLKEVARHCVYWDSIGLASFRVCVNISPLQFNQPDLLHYIKGFLGRSGLDP 459 Query: 382 FQIVLEITERDMLKEQEA-TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDR 440 ++ LE+TE ++ + E+ + L S+G+++A+DDFGTG+S+L YL RF ++ LKID+ Sbjct: 460 HRLELELTESAIMTDGESNILKLSQLKSLGLDLAVDDFGTGYSSLSYLRRFPINTLKIDQ 519 Query: 441 GFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRP 500 F+ + + ++DA++ LAK LNM ++AEG+ET EQ +L++RGV+ MQG++ +RP Sbjct: 520 SFVADM-NSADGAAIVDAIIALAKTLNMRSIAEGIETEEQLAYLAKRGVDLMQGFYFARP 578 Query: 501 LPLDDFVRWLKKPYT 515 L +D + + Y+ Sbjct: 579 LYPEDVPNAIAQDYS 593 >UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellular organisms RepID=Q5P8Z7_AZOSE Length = 1008 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 94/491 (19%), Positives = 179/491 (36%), Gaps = 71/491 (14%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQA--NPELTARAAFSMNVRTF 96 H++ +YL L +R+ A A +++ F Sbjct: 528 HDITDRKEAQARIEYLAH-HDALTGLPNRVLFRDRFALATAWAERAHAKVALLFVDLDHF 586 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 + D T + + + Sbjct: 587 KTIND--TLGHPVGDGLLQGVALRLREC-------------------------------- 612 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 L T ++ E + I A+++ ++++ + Sbjct: 613 ----------LRETDTVSRLGGDEFLIALTDIRDPQAINSATAKIFDTLTRPFELEGHEL 662 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVV-GLLCYYLMSVRM--------RPGRE 267 + + + ++ DD D M G + + +M + Sbjct: 663 TNTMSIGIAIWPDDGEDFDTLLKNADTAMYQAKRAGRNTWRFYTEQMNANAVEQLQLRTA 722 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + +A++ ++F + YQP ++ + V G+E LLRW +PPD FI AE +IVP+ Sbjct: 723 LHSALENDEFLLHYQPQINLASGHVVGVEALLRWHWDKRELVPPDRFIPAAEESGLIVPI 782 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + A + + +N++ + + + L+ ++ LE Sbjct: 783 GDWVLREACMQAVRWTRQGLPELTIAVNLSAVQFRRGDLERSVVRALSLSGLDPARLELE 842 Query: 388 I--------TERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKID 439 + TE + L S+GV ++IDDFGTG+S+L YL+RF +D LKID Sbjct: 843 LTESLLLVDTESV-------IETLRRLKSLGVRLSIDDFGTGYSSLAYLKRFAVDKLKID 895 Query: 440 RGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISR 499 + F+ I T+ + ++ A++++A L + +AEGVE+ + R+L + QGY +R Sbjct: 896 QSFVRDIATDPDDAAIVRAIVSMAHTLKLQVIAEGVESEDIDRFLHIFNCDEAQGYHYAR 955 Query: 500 PLPLDDFVRWL 510 P+P D WL Sbjct: 956 PMPGDALAEWL 966 >UniRef50_UPI0001AEC0A6 sensory box protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC0A6 Length = 1517 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 92/485 (18%), Positives = 168/485 (34%), Gaps = 57/485 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLV 99 ++ L L +R + Q + +++ F + Sbjct: 1069 DITSRKSTEKELLKLANT-DPLTELPNRS--FFQASHQNLVRKGAQHTLLCLDMDNFKKI 1125 Query: 100 KDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNS 159 D + + + + + Sbjct: 1126 NDS--LGHQTGDILIKQIAKRLQRITGKS------------------------------- 1152 Query: 160 GVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAG 219 + + E + ++ ++ L++ + ++ + G Sbjct: 1153 -----------ATCYRLGGDEFSVLMEDNADIHTVTHYAQNLLDTLSRPFIINKQEFVLG 1201 Query: 220 IPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMS--------VRMRPGREIMT 270 + + + DD T M G Y S +++ I Sbjct: 1202 ASIGIAFFPDDGTSPQEMLKNADTAMYFAKNNGGNSYQFFSGEMNQNAVRQLQIENLIRQ 1261 Query: 271 AIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQH 330 IK + F V YQP VD + ++ +E L+R+ HP G + P FI AE I+ + + Sbjct: 1262 GIKDDLFTVYYQPKVDIASGKLVSMEALVRFEHPQKGIVSPGQFIPLAEQTGQIIEIGEQ 1321 Query: 331 LFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITE 390 + D + +NI+ I K+L+ + + EITE Sbjct: 1322 VLRKACADTKRWVNQGLFSGRVAVNISAKQFELPDLDDRINKILSDIGLSPLHLECEITE 1381 Query: 391 RDMLKEQEA-TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTE 449 +++ E Q+ L G+ +A+DDFGTG+S+L YL+RF L+ LKID+ FI+ I Sbjct: 1382 GTLMESPENGLQMMTRLRERGIHLALDDFGTGYSSLAYLKRFPLNTLKIDKAFIDDIAKS 1441 Query: 450 TITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRW 509 + + A++ +A L + VAEGVE Q L +QG+ SRPL + F + Sbjct: 1442 NVDRHMAAAIINIAHNLGLKVVAEGVEEEAQLDILRRYDCEMLQGFLYSRPLNAERFEKL 1501 Query: 510 LKKPY 514 L + Sbjct: 1502 LTENQ 1506 >UniRef50_Q3A2U2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2U2_PELCD Length = 988 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 97/493 (19%), Positives = 184/493 (37%), Gaps = 57/493 (11%) Query: 34 VAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRL--QPLTLDTCQQANPELTARAAFSM 91 A +V + Y+ L +R Q ++A A + Sbjct: 531 FATFSLDVSEQKKAQRTIHRMA-YYDHLTELPNRALFQKELDRRLEEAVGRGHGLALMFL 589 Query: 92 NVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWY 151 ++ F V D + + + + ++ Sbjct: 590 DLDHFKGVNDS--LGHAKGDLLLQKIAARLQGCLGREDF--------------------- 626 Query: 152 RNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMP 211 L + E + I A+ + + + Sbjct: 627 ---------------------LARLNGDEFIFLLTEIDDPVAVKALAGNVQRIMASPFNL 665 Query: 212 VRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---------VGLLCYYLMSVRM 262 + G + + Y + + R Sbjct: 666 DGDEIYVGTSIGIACYPLHGVDVENLMKRADRALYAAKERGRNAIELFSEQINARFHRRQ 725 Query: 263 RPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQK 322 + + A+ + +F++ YQP VD Q R+ G+E LLRWR+ G + PD FI+ AE Sbjct: 726 QLEMRLQNALAKNEFFLEYQPQVDLQTGRMLGVEALLRWRNDDLGLVMPDDFISLAEETG 785 Query: 323 MIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHF 382 +I P+ + + ++ + ++ +NI+ + F I +L S Sbjct: 786 LIRPIGEWVLRTACQEYLSWWQPEGAELRLAVNISGQQIKHPDFVPIIDDILHSTGFDPR 845 Query: 383 QIVLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRG 441 + LEITE +++ E F L + +++AIDDFGTG+S+L YL F +D LKIDR Sbjct: 846 LLELEITETVAMEDVEGNIGTFRDLKARRLQLAIDDFGTGYSSLSYLRHFPIDRLKIDRK 905 Query: 442 FINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPL 501 FI + ++ +++A++++A+ L++ +AEGVET EQ +L ++G +QG++ RP+ Sbjct: 906 FIRDAAKCSDSASLVEAIMSMARSLHLDIIAEGVETEEQVAYLWKQGCRQIQGFFFGRPM 965 Query: 502 PLDDFVRWLKKPY 514 D ++L++ Sbjct: 966 SASDLQKYLQEQT 978 >UniRef50_D2SGK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SGK4_9ACTO Length = 898 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 108/493 (21%), Positives = 177/493 (35%), Gaps = 58/493 (11%) Query: 37 HKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTF 96 V L + L +R+ L A A +++ F Sbjct: 434 QLGRVVERELAQGRLTH-HALHDPLTGLPNRVLLLDRLEVALAQRSRGGVAVAFVDLDHF 492 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 L+ D +A + + A+ + +A Sbjct: 493 KLINDS--LGHAAGDTVITAAATRLRAV-VRPGDTVARFG-------------------- 529 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 E ++ + + RL + Sbjct: 530 ---------------------GDEFVVLAESVVDERDVEGLAERLAGALAEPFDLAGDEV 568 Query: 217 IAGIPLTVRLYA-----DDWTWNDVWYAFLLGGMSGTVVGLLCYYLMS----VRMRPGRE 267 + + + + D A +G + +M R+ + Sbjct: 569 FVTASIGIAVSSGTGGDAHGLLRDADAAMYRAKEAGRARHEVFDSVMRAGAIRRLEIVND 628 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A++R QF + +QP +D + + G+E LLRW HP G IPP FI AE +I L Sbjct: 629 LHRALERNQFVLHFQPQIDLRTNSLIGVEALLRWVHPERGLIPPLEFIPVAEETGLINDL 688 Query: 328 TQHLFELIARDAAELEKVLP--VGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIV 385 + + + P + +N++ LH ++ L Q+V Sbjct: 689 GRWVLRAACQQGRTWLDRFPDREPLVMSVNLSGRQLHQPRLAEEVAAALEDSGFPADQLV 748 Query: 386 LEITERDMLKEQEA-TQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFIN 444 LEITE ++ + A L +GV +AIDDFGTG+S+L YL+RF +D LKID+ F++ Sbjct: 749 LEITESVLMNDTAATIHTLEALKELGVRLAIDDFGTGYSSLTYLQRFPIDILKIDKSFVD 808 Query: 445 AIGT-ETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPL 503 +G+ S V ++ LAK L + TVAEGVE E R L + QGY+ +RPL Sbjct: 809 GLGSANIEESAVTRTIVALAKTLRLETVAEGVERSEHVRELQSLHCDIGQGYFFARPLDA 868 Query: 504 DDFVRWLKKPYTP 516 + +P TP Sbjct: 869 GALTTLMAQPDTP 881 >UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K2X7_AZOSB Length = 1070 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 103/461 (22%), Positives = 177/461 (38%), Gaps = 57/461 (12%) Query: 58 FADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDI 115 + L +R L A +++ F +V D E+ Sbjct: 646 YDGLTGLPNRYLLDDRLEQAIVAARRHERLLGVAFIDLDHFKVVNDNV--GHRQGDELLR 703 Query: 116 PLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFY 175 + A+ + G + Sbjct: 704 QAASRLAAV---------LRDGD---------------------------------TAAR 721 Query: 176 SSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWND 235 E + + RL + + V LY D D Sbjct: 722 QGGDEFVVLLPDLGDERDAFRILGRLQAALAEPFRLDDRSFFVTCSIGVSLYPRDGGDGD 781 Query: 236 VWYAFLLGGMS---GTVVGLLCYYLMSV------RMRPGREIMTAIKREQFYVAYQPVVD 286 M ++ ++ + R++ + +A++ + ++A+QP VD Sbjct: 782 TLLKHADIAMYQAKAAGRNVVRFFTAEMNIQVRDRLQLEGALRSALENGELHLAFQPQVD 841 Query: 287 TQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVL 346 + +V G E LLRW+HP G +PP FI AE +I P+ + + R A + E+ Sbjct: 842 GGSGQVIGAEALLRWQHPELGAVPPVRFIPLAEETGLIGPIGEWVLRAACRQARQWEQAG 901 Query: 347 PVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAW 405 ++ +N++ S A I ++L + LE+TE ++ + E A ++ Sbjct: 902 -RRLRIAVNVSARQFRSPDLPARIAEILDETGLPPALLELELTESMLMGDAEQAEEMLHR 960 Query: 406 LHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKR 465 L +GV +A+DDFGTG+S+ YL+RF +D LKID+ F+ ++ ++ A++ LA Sbjct: 961 LKQLGVSLALDDFGTGYSSFAYLQRFPIDTLKIDQSFVRSMVAGVRGEAIVVAIIALAHS 1020 Query: 466 LNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 L M +AEGVETP Q R L E G + +QGY RP+P +F Sbjct: 1021 LGMRVIAEGVETPLQQRQLFEFGCDELQGYLFGRPVPAAEF 1061 >UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Arthrospira RepID=B5VXY3_SPIMA Length = 1092 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 98/498 (19%), Positives = 187/498 (37%), Gaps = 57/498 (11%) Query: 29 CLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTAR 86 K ++ ++ + Y L +R +A + Sbjct: 640 GYITHFIAVKEDITQQKHNEEILAHQANY-DALTDLPNRTLIFDRLRQAITEAQVHHSNV 698 Query: 87 AAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPA 146 A +++ Sbjct: 699 AVMFIDLDH--------------------------------------------FKNINDT 714 Query: 147 IVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNE 206 + + LLK +G+ + T ++ E + + ++++++V Sbjct: 715 LGHELGDFLLKEAGMRLRGCIRKTDTVGRLGGDEFLLIIPKLDDLVQAEYIANQVLDVLG 774 Query: 207 LTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSV--- 260 E + + Y D M + ++ ++ Sbjct: 775 EPFNLCGEEAFISASIGIASYPQDGKNVSTLVRNADTAMYAAKQEGRNVFAFFTQNMNDE 834 Query: 261 ---RMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINF 317 R+ ++ AI R + V YQP + ++ G E L+RW +P G I PD FI Sbjct: 835 AQSRIIIENQLRHAISRNELSVVYQPFIHLNTSQIVGAEALMRWYNPELGNIRPDQFIAI 894 Query: 318 AESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSL 377 AE ++IV L + + ++ A + G+ +N++P L + + I + + + Sbjct: 895 AEESRLIVDLGEWILSQACQEVANWHQQGNNGLWVAVNMSPRQLRTPNLVNVIIEAIANN 954 Query: 378 PAHHFQIVLEITERDMLKEQEATQLF-AWLHSVGVEIAIDDFGTGHSALIYLERFTLDYL 436 + LEITER +++E Q L+ + + +AIDDFGTG+S+L YL+RF L Sbjct: 955 GLSSDCLELEITERSLVEEVPGVQSLIKQLNHLKIRLAIDDFGTGYSSLSYLKRFPFSVL 1014 Query: 437 KIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYW 496 KID+ FI+ + + ++ ++T+A L ++ VAEG+ET Q +L +G ++ QGY Sbjct: 1015 KIDKSFISDLPDDQDAIALVKTMITMAHGLGLVVVAEGIETTAQLDFLCNQGCDYGQGYL 1074 Query: 497 ISRPLPLDDFVRWLKKPY 514 S+PLP F +L++ Sbjct: 1075 FSKPLPPAQFRAYLQRNS 1092 >UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACK6_ALHEH Length = 857 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 106/499 (21%), Positives = 183/499 (36%), Gaps = 60/499 (12%) Query: 33 LVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQAN-PELTARAAFSM 91 ++ YL Y L +R N A F + Sbjct: 404 HYIGIASDITSHKAAEQHIDYLAHY-DTLTGLGNRRLLEEELERMLRNARGGRPFALFFL 462 Query: 92 NVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWY 151 ++ F + D T + + + + + L + Sbjct: 463 DLDRFKNIND--TLGHESGDRLLEEVADRLRDLAGPQ----------------------- 497 Query: 152 RNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMP 211 +L E + + +L+ Sbjct: 498 -------------------ATLCRIGGDEFAILAPGLSHRQTAG-IARQLVEGISRPYEI 537 Query: 212 VRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSV---------RM 262 + + V ++ D T + + + +Y R+ Sbjct: 538 TERPLVVTCSVGVAVHPRDGTRREALISAADTALHYVKAHGSNHYQFHEPGMTAAAAERL 597 Query: 263 RPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQK 322 ++ A+ R +F + YQPV+DT+ L V G E LLRW HP AG IPPD FI AE Sbjct: 598 HLENDLREALLRGEFELYYQPVLDTERLTVCGAEALLRWHHPEAGLIPPDRFIPLAEETG 657 Query: 323 MIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHF 382 +I P+ + AA ++ G+ +N++ + + +++ L + Sbjct: 658 LIRPIGTWVLREACAQAARWRRLGLTGMTVSVNVSGEQFWRDELPQAVRQALEAQALAPD 717 Query: 383 QIVLEITERDMLKEQEATQL-FAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRG 441 +VLEITE ++ T+ L ++GV +++DDFGTG+S+L YL+RF +D LKID+ Sbjct: 718 ALVLEITESVLMHGSANTETRLRELKAMGVGLSLDDFGTGYSSLSYLKRFPIDTLKIDKS 777 Query: 442 FINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPL 501 F+ + + + V+ + L + VAEGVE+ E L + +QGY SRPL Sbjct: 778 FVRDMVRDEHDRTLAQTVIAMGHGLGLQVVAEGVESAEHLPLLRRARCDRVQGYHFSRPL 837 Query: 502 PLDDFVRWLKKPY---TPQ 517 P RW+++ +PQ Sbjct: 838 PARALSRWIQQHQCSRSPQ 856 >UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K210_DESAC Length = 920 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 103/427 (24%), Positives = 182/427 (42%), Gaps = 27/427 (6%) Query: 112 EMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTP 171 PL L L I+ + +AI +++ N + A+ + Sbjct: 492 AYHDPLTGLPNRLLISDRLKLAIAKARRHKTQAVLLLLDLDRFKNINDTLGHAVGDRILT 551 Query: 172 SLFYS--------------SRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 +L E + I + + + + +L ++ + E Sbjct: 552 TLAQRMQETLRDTDTVARFGGDEFLVLLEDIRELSDVVSLAQKLSDLVSQPVLIDGEEMC 611 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSG---TVVGLLCYYL------MSVRMRPGREI 268 + + + +D D F M +Y R++ + Sbjct: 612 LTTSVGISVAPEDSIEVDQLIRFADTAMYRAKEKGRNNFQFYTPDMNAHAGRRLQLENNL 671 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 A++R++ V YQP V+ + R+ G E LLRW HP G I P+ FI AE +I + Sbjct: 672 RKALQRQEMVVYYQPQVEMDSGRIIGSEALLRWMHPEHGLISPNDFIPLAEETGVIEEIG 731 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 E + +K P +K +N++ +E+ DI+++L + +E+ Sbjct: 732 AWALEQACQQTVAWQKNHPE-LKIAVNLSARQFRNENLVDDIEQILNKTGLAARHLEMEL 790 Query: 389 TERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE ++++ + A L L +G+ +AIDDFGTG+S+L +L RF +D LKIDR F+N++ Sbjct: 791 TESLLMEDVDVAIDLMNRLTKLGITLAIDDFGTGYSSLSHLNRFPIDKLKIDRSFVNSMS 850 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 + + ++TL + L + +AEGVE EQ + L + G QGY+ SRP+ + F Sbjct: 851 LDNNG--IARTIITLGRTLGLSIIAEGVENNEQRQLLLQLGCPQAQGYYFSRPVHDNAFS 908 Query: 508 RWLKKPY 514 L+KP Sbjct: 909 EMLEKPT 915 >UniRef50_C0N514 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N514_9GAMM Length = 1084 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 95/489 (19%), Positives = 178/489 (36%), Gaps = 57/489 (11%) Query: 36 WHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNV 93 W ++ + L + L +R ++ A F +++ Sbjct: 637 WLFEDITIQRQNEEHLTRLASI-DGLTGLPNRAVFTDRVEHAIHKSMRNSGRLAVFFLDL 695 Query: 94 RTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRN 153 F + D A + + I A + + +A L Sbjct: 696 DHFKHINDS--LGHKAGDILLTEVAGRIKAC-VREGDTVARLG----------------- 735 Query: 154 PLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVR 213 E + + + + +++ Sbjct: 736 ------------------------GDEFTLLLEDVRSAEYVGKVAEKVIKSMTQPYQIEN 771 Query: 214 ETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSV------RMRP 264 + + LY D D+ M +Y + R+ Sbjct: 772 TEVNISPSIGISLYPADGRDVDMLVRNADAAMYHAKKVGRNNFQFYSAEMNAEAAKRLAM 831 Query: 265 GREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMI 324 + ++++ ++ YQP V+ Q ++ G EVLLRW+ G + P F+ E MI Sbjct: 832 ETALRRVVEQQDLHLHYQPQVNLQTGKLVGAEVLLRWQSEQWGNVSPAEFVPMLEDTGMI 891 Query: 325 VPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQI 384 + + + E + LP +N++ S A I++LL + Sbjct: 892 TQVGEWILRQACATYLEWSERLPDNFMMAVNLSGRQFKGGSLAAFIRRLLDETGMPAAHL 951 Query: 385 VLEITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFI 443 LEITE ++ + E AT A L ++ + +AIDDFGTG+S+L YL++F L+ LKID F+ Sbjct: 952 ELEITESMLMDDTELATITLAELSAMNISLAIDDFGTGYSSLSYLKQFPLNVLKIDSSFV 1011 Query: 444 NAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPL 503 + ++ + ++DA++ ++ L + VAEGVET EQ ++L QG+ S+ + Sbjct: 1012 RDVTSDKDDAAIVDAIMAMSNSLGLKVVAEGVETAEQRQYLLRHDCRLAQGFLFSKAVDK 1071 Query: 504 DDFVRWLKK 512 D F + + Sbjct: 1072 DKFSTLIDQ 1080 >UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GA6_THICR Length = 815 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 96/482 (19%), Positives = 191/482 (39%), Gaps = 54/482 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFV 97 EV + + L ++ L +R LQ A +++ F Sbjct: 371 EVTERKKAEEAIQNLA-FYDPLTQLPNRRLLQDRLQQEMAVTERSKHVCALMFIDLDDFK 429 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 + D T ++ + + ++ + +A + G V P++ +++ Sbjct: 430 TLND--TLGHDTGDKLLRQVATRLRE-NVREFDTVARIGGDEFVLILPSLDDDWKDA--- 483 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 T + +++ V + Sbjct: 484 ---------------------------------ATHAELVAQKVLRVLNKPYLLDSTPYH 510 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMS---GTVVGLLCYY------LMSVRMRPGREI 268 + + V+L++ + M + +Y +++ + + Sbjct: 511 STPSIGVKLFSGHQETLEELLKHADLAMYQAKAKGRNTVRFYDTTMQEVVNAKSVMEASM 570 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 AI +QF + YQP ++ ++ G E L+RWRHP G I P+ FI AE I+ + Sbjct: 571 RQAITGQQFVLFYQPQIN-SNGQIIGAEALVRWRHPQKGLIAPNKFIPLAEENGFILSIG 629 Query: 329 QHLFELIARDAAEL-EKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + + + E + + +N++ H ++++++ A+ + LE Sbjct: 630 RWVLQTACEQLVEWARQPATAQITMAVNVSARQFHQIDLVEEVERIICQTGANPQLLKLE 689 Query: 388 ITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 +TE ++K+ ++ L +GV ++DDFGTG+S+L YL+R LD LKID+ F+ I Sbjct: 690 LTESLLVKDIEDVVDKMQALKKLGVSFSLDDFGTGYSSLAYLKRLPLDQLKIDQTFVRDI 749 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 ++ + + AV+ LAK + +AEGVE EQ + L + G QGY RP+P+++F Sbjct: 750 IDDSNDAAIARAVIALAKSMEFNVIAEGVENIEQHQMLIDMGCRVFQGYLFGRPVPIEEF 809 Query: 507 VR 508 + Sbjct: 810 FQ 811 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 481 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 96/488 (19%), Positives = 189/488 (38%), Gaps = 54/488 (11%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTF 96 ++ ++ L YF L +R L + A +++ F Sbjct: 331 RDITTSKAASEKINNLA-YFDPLTQLPNRRMLLDSLRHVLTISARSNQHCALLFLDLDNF 389 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 + D T + + + + + +A L G V Sbjct: 390 KTLND--TLGHDVGDLLLQQVATRLTDC-VREGDIVARLGGDEFVVLL------------ 434 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 + + I + +++ Sbjct: 435 ------------------------ENLSLQAIEAANKAKKVAKKIIFELAQYYQLNMHRY 470 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMS--------VRMRPGRE 267 + + V +++ + T + M G ++ + R R+ Sbjct: 471 HSTTSIGVTIFSGNETGIEELLKQADIAMYQSKAAGRNTWHFFNKTMQESIIARADMERD 530 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + AI+ QF + YQ V + + G E L+RW+HP G++ P FI AE +I+P+ Sbjct: 531 LRKAIEDNQFQLHYQAQVS-SSGQTLGAEALIRWQHPERGQVSPFNFIPLAEETGLILPI 589 Query: 328 TQHLFELIARDAAELEK-VLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 Q + + +K L + +NI+ LH E F ++ L + ++ L Sbjct: 590 GQWVLDSACAQLKAWQKNPLTQDLVLAVNISAKQLHQEDFVEQVKATLKRHDINPARLKL 649 Query: 387 EITERDMLKE-QEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 E+TE +++ + L +G+ ++DDFGTG+S+L YL++ L+ +KID+ F+ Sbjct: 650 ELTESMLVENISDIITKMNILSKIGISFSLDDFGTGYSSLQYLKKLPLNQIKIDQSFVRD 709 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 + T+ ++ ++T++ L++ +AEGVET E+ ++L + G QGY S+P+P+++ Sbjct: 710 LITDASDRAIVRTIITMSHSLDISVIAEGVETVEERQYLLDNGCTHYQGYLFSKPVPINE 769 Query: 506 FVRWLKKP 513 F LKK Sbjct: 770 FEVLLKKG 777 >UniRef50_C6XBI7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBI7_METSD Length = 681 Score = 481 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 118/507 (23%), Positives = 193/507 (38%), Gaps = 57/507 (11%) Query: 16 CIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTL 73 I + + S L V +V + +L YF L +R Sbjct: 219 IIHIWLAAELDASGLPIAVIGMGQDVTETYEYQERIHHLA-YFDTLTKLPNRALLIDRVE 277 Query: 74 DTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMA 133 T +A +++ F + D T + + + + + +A Sbjct: 278 QTIAEAERHAYPFGLIMLDLDRFKEIND--TLGHTLGDVLLCEVASRLEKC-VRPYDTVA 334 Query: 134 ILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTA 193 L E V+ + Sbjct: 335 RL-----------------------------------------GGDEFGILVSEMRVPEN 353 Query: 194 LSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---V 250 ++ + +++ + + L + Y D D + + Sbjct: 354 ITRVADKVLQAFDQPFVVDGHDVFVTASLGIAAYPSDSQAVDDLLKYADSALFHAKHLGR 413 Query: 251 GLLCYYLM------SVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHP 304 +Y + R + A+K+E+F + YQP+VD + G E LLRW+H Sbjct: 414 NNFQFYSADLTIKAAERREVETNLRFALKKEEFLLHYQPLVDLATREIIGAEALLRWQHE 473 Query: 305 VAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSE 364 I PD FI AE +I+P+ + + + A L + P V +N++ Sbjct: 474 SGKLIMPDKFIGIAEETGLIIPIGEWVMRSACQVAVALNRGRPRPVTVAVNLSTRQFLHN 533 Query: 365 SFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQ-LFAWLHSVGVEIAIDDFGTGHS 423 + IQ +L H I LEITE +L+ + Q + L ++G+ I+IDDFGTG+S Sbjct: 534 DLVSSIQAILAETGCHTDWIKLEITESLLLENTDNIQRMLQSLSAMGLCISIDDFGTGYS 593 Query: 424 ALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARW 483 AL YL RF + LKIDR F + I + ++ A+++LA+ LN VAEGVET EQA + Sbjct: 594 ALSYLHRFPVRELKIDRSFTSDITDNAERALIVQAIVSLARNLNKNVVAEGVETLEQADY 653 Query: 484 LSERGVNFMQGYWISRPLPLDDFVRWL 510 L + G QGY S+PLPL+ F+ L Sbjct: 654 LHKMGCPQAQGYLFSKPLPLEQFLALL 680 >UniRef50_B8HNE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HNE5_CYAP4 Length = 877 Score = 481 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 104/532 (19%), Positives = 194/532 (36%), Gaps = 68/532 (12%) Query: 3 IRAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLK 62 +R N + +L+ +A + +A ++ L + + D L Sbjct: 391 LRHKNGKYRWVLSRGIA----VRNSEGKAYRMAGSLSDISEQRLAQEQLMH-DALHDPLT 445 Query: 63 STTDRLQ--PLTLDTCQQANPELT-ARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNE 119 +R A A +++ F ++ D A + I L Sbjct: 446 GLPNRTLFMDRLRQVIHHARRHRNYNFAVLFVDLDRFKVINDS--LGHLAGDTLLIELAH 503 Query: 120 LIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQ 179 + L ++ Sbjct: 504 RFQ------------------------------------------IGLRPDDTVARLGGD 521 Query: 180 EDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDW-------T 232 E + ++ + R+ + + + +T + + D Sbjct: 522 EFVILLDDLLEVEESIRIAHRIQTLVQQPFIINGQTVFTSASIGIA--PKDTHHHKPEHY 579 Query: 233 WNDVWYAFLLGGMSGTVVGLLCYYLMSV----RMRPGREIMTAIKREQFYVAYQPVVDTQ 288 + A +G +L +M R++ ++ A++R++ + YQP++ Sbjct: 580 LRNADIAMYRAKAAGGSRHVLFTSVMHTSALVRLQLETDLRQALERQELRLQYQPILCLN 639 Query: 289 ALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPV 348 ++ G E L+RW+HP G I P FI AE +IVP+ + + + R Sbjct: 640 TDQIVGFEALVRWQHPRDGLIAPGHFITVAEETGLIVPIGEWVLQEACRQMQCWHTQFGQ 699 Query: 349 --GVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQE-ATQLFAW 405 + +N++ L + ++L Q+ LEITE +L E A Q Sbjct: 700 VLPLMVSVNLSSKQLSQPDLLQQVDRMLAETGLRPQQLKLEITESMILDNTEVARQTLLK 759 Query: 406 LHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKR 465 L +++++DDFGTG+S+L YL R +D LKIDR FI+ + + + ++ A++++A Sbjct: 760 LKERQIQLSMDDFGTGYSSLNYLHRLPIDLLKIDRSFIHEMDSGEESRELVRAIISIAHS 819 Query: 466 LNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQ 517 L M +AEG+ET Q L E G F QGY S PL + +L++ + Q Sbjct: 820 LKMQVIAEGIETRSQLEQLHELGCEFGQGYLFSTPLDPEPAADFLQQAFLKQ 871 >UniRef50_B7RSV6 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RSV6_9GAMM Length = 763 Score = 481 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 103/474 (21%), Positives = 181/474 (38%), Gaps = 45/474 (9%) Query: 56 TYFADLKSTTDRLQPLTLDTC--QQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEM 113 Y+ L S +R + + A A +++ F + D SA + Sbjct: 312 AYYDALTSLPNRRLFTEQLSLLLKLAQRNKQTLALLFLDLDNFKRINDS--LGHSAGDLL 369 Query: 114 DIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSL 173 + + + + +V V + + Sbjct: 370 LREVGQRLSKCVRDSDV------------------------------VAHYADPTAKIDV 399 Query: 174 FYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTW 233 E + + ++ + RL+ + + + + + + Sbjct: 400 SRLGGDEFTVVLNDLDAPESVGVVAERLILALSEPMLIDGHELVITPSIGIAIAPEHANE 459 Query: 234 NDVWYAFLLGGMSGTVVGL---LCYYLMSV------RMRPGREIMTAIKREQFYVAYQPV 284 + M Y S+ R+ ++ A+ ++ + YQP Sbjct: 460 VEGLLRCSDTAMYHAKASGKSTYLVYESSMEEAGLDRLTLENDLRKAMDNDELVLFYQPQ 519 Query: 285 VDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEK 344 VDT++ +V G E LLRW HP G IPP FI AE +I + + + K Sbjct: 520 VDTRSGKVVGAEALLRWMHPEQGLIPPFKFIPLAEEMGLIGEMGDWVIREACKQVQTFAK 579 Query: 345 VLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEA-TQLF 403 K +N++ SF ++ +L L + LE+TE ++ + A Q Sbjct: 580 KGVSLPKVAVNVSALQFT-PSFTRRVKSILDELAVDPATLELELTEGVVMGDTNASVQAL 638 Query: 404 AWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLA 463 A L +GV ++IDDFGTG+S+L YL RF LD LKIDR F+ + ++ A++ +A Sbjct: 639 AELKDLGVSLSIDDFGTGYSSLSYLSRFPLDELKIDRSFVIEANNSEQGASLVRAIIAMA 698 Query: 464 KRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQ 517 + L + VAEGVET EQ +++ G + +QGY S+P+P + L + Q Sbjct: 699 QSLGLELVAEGVETDEQYEFMTTAGAHVIQGYMFSQPVPAEKLEPLLAPWHFQQ 752 >UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ51_9DELT Length = 751 Score = 481 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 93/476 (19%), Positives = 178/476 (37%), Gaps = 58/476 (12%) Query: 48 TDVQKYLDTYFADLKSTTDRLQP--LTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTF 105 ++ + Y+ L + +RL + A T + +++ F +V + ++ Sbjct: 319 SEAKLESLAYYDPLTALPNRLLLHSRLEHALEWAERHQTKVGVYFIDLDQFRVVNESLSY 378 Query: 106 CSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAAL 165 A ++ + +++ + Sbjct: 379 --QAGDQLLVMVSKRFLSC----------------------------------------- 395 Query: 166 NLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVR-ETKIAGIPLTV 224 L + +L E + + + L+ + + G + + Sbjct: 396 -LRVDDTLARPGGDEFVLIQEALADPQEATETARELLASLDQPFQLDGGQEIYLGASIGI 454 Query: 225 RLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSV------RMRPGREIMTAIKRE 275 ++ D T M +Y + R++ + A++ Sbjct: 455 TVFPGDGTTPPDLLKNAEAAMYHAKENGRNRFSFYAEQMNADALARLQMEMALRQAVENR 514 Query: 276 QFYVAYQPVVDTQAL-RVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFEL 334 + + YQP V G E L+RWR+ I PD FI AE +I + + + Sbjct: 515 ELLLYYQPQWQLADSPSVIGAEALIRWRNKEGELIAPDQFIPLAEKSGLIGAIGDWVIDE 574 Query: 335 IARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDML 394 R ++ +N++ + + + + L LE+TE ++ Sbjct: 575 ACRQLRIWRDQGKKQLRVAVNVSARQFRAGNLAEVVAQALRKHEIPAHCFELELTESILM 634 Query: 395 K-EQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITS 453 + +EA +L ++GV IA+DDFGTG+S+L YL RF + LKIDR F+ + + + Sbjct: 635 EKPEEAAELLNRCAALGVGIALDDFGTGYSSLAYLSRFPITVLKIDRSFVRDLNHRSEAA 694 Query: 454 PVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRW 509 + D+++ LA R+ + VAEGVET EQ +L RG + QG+ S PLP + F + Sbjct: 695 LIADSIIALAHRMGLQVVAEGVETEEQRAYLQSRGCDLAQGFLFSPPLPAEQFAEF 750 >UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 Tax=Comamonadaceae RepID=D0IUW1_COMTE Length = 900 Score = 481 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 109/491 (22%), Positives = 179/491 (36%), Gaps = 58/491 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ + ++L L +R Q + + + + A N+ F Sbjct: 446 DISAEKAREQQLEFLAH-RDTLTGLPNRSQFTRMLGEAVELSQSTNRRMAVLLFNIDRFK 504 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 V D + S E+ ++ + A+ G Sbjct: 505 DVNDS--YGHSIGDEVLRHVSVQMQG---------ALRHGD------------------- 534 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDM-PVRETK 216 + + E I G + + RLM P + Sbjct: 535 --------------IIGRLAGDEICVVAQSICGRDSAVDVAERLMAAAGQPWTTPDGLSV 580 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---------VGLLCYYLMSVRMRPGRE 267 + + + LY D D + G R+ Sbjct: 581 VVSVSAGICLYPDHALTADDLLQGAHAAVYGAKARGSNAWCFFHENMTQAARERLALEAR 640 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + A++ + YQP ++ R+ G E LLRW P G I P FI AE+ +I PL Sbjct: 641 LRRALELGHMRLYYQPQIELATGRLVGAEALLRWLDPEEGLISPARFIPVAENSGVIGPL 700 Query: 328 TQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLE 387 + R + + +N++ + L + LE Sbjct: 701 GLWVLGEACRQGQQWRAAGLPDLAIAVNVSLHQFLLTDIAGATAEALNKSGFPASLLELE 760 Query: 388 ITERDMLK-EQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAI 446 ITE + + +EA + L +G+ +AIDDFGTG+S+L +L+RF LD LKID+GFI I Sbjct: 761 ITESALAEKPEEALAVLNRLRELGLRLAIDDFGTGYSSLAHLKRFPLDLLKIDQGFIRDI 820 Query: 447 GTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDF 506 + +V+ L + + +AEGVET EQ +L ++G ++ QGY+ SRPLP +DF Sbjct: 821 PHSADDMTISSSVIALGHAMGLKVLAEGVETQEQLSFLQQKGCDYFQGYFCSRPLPAEDF 880 Query: 507 VRWLKKPYTPQ 517 R L+K Q Sbjct: 881 TRLLEKTREGQ 891 >UniRef50_D1REK0 Putative response regulator, PAS/GGDEF/EAL domain-containing protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1REK0_LEGLO Length = 752 Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats. Identities = 91/492 (18%), Positives = 179/492 (36%), Gaps = 58/492 (11%) Query: 36 WHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNV 93 W ++ +T ++ T L +R+ A + A +++ Sbjct: 305 WSFQDISERISLTAKLEFQAT-HDALTELPNRILLFDRIHHAITHAQRINSLFAVIFIDL 363 Query: 94 RTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRN 153 F L+ D F +A + ++ + + Sbjct: 364 DRFKLINDS--FSHAAGDSLLKEISSRLKKI----------------------------- 392 Query: 154 PLLKNSGVFAALNLNLTPSLFYSSRQEDYDGV--ALIIGNTALSTFSSRLMNVNELTDMP 211 + ++ S E + + + +++ Sbjct: 393 -------------MREEDTIARLSGDEFIFILLSESLKKPEDIMAICDKILAAITKAITI 439 Query: 212 VRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMS--------VRM 262 + + + + +Y D + D M +G Y S R+ Sbjct: 440 SKREILITASMGISIYPQDGSNVDELIRNADLAMYNAKALGGNQYQFYSAKLNQQSLERL 499 Query: 263 RPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQK 322 + A+ + Y+ YQP D + ++ +E L+RW+HP G + P FI AE Sbjct: 500 DKESALRKALLSNELYLEYQPQYDVKTEQLIAVEALIRWKHPKKGILLPMDFIPLAEETG 559 Query: 323 MIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHF 382 +IVP+ + + + +N+A F ++++L Sbjct: 560 LIVPIGEWVLRTACIQNKAWQDKGFPPFSVAVNVATKQFMQPDFVQMVKRVLNESGLLPE 619 Query: 383 QIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGF 442 + +E+TE +++ T+ L ++G+ I +DDFGTG+S L YL +D LKID+ F Sbjct: 620 YLEIEVTENILIRNIAVTESIKELKNLGIRIVLDDFGTGNSCLSYLRALPIDQLKIDQSF 679 Query: 443 INAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLP 502 I+ I + V+ A+++LA L+ VAEGVE Q +L + + +QGY+ S+P+ Sbjct: 680 IHDIEENNSDALVVKAIISLANSLSFDVVAEGVENLLQVDFLKNQHCDKLQGYYFSQPVS 739 Query: 503 LDDFVRWLKKPY 514 ++ +K Sbjct: 740 AEELESLIKNNK 751 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats. Identities = 97/491 (19%), Positives = 179/491 (36%), Gaps = 55/491 (11%) Query: 39 HEVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTF 96 ++ + +L ++ L +R L +++ F Sbjct: 541 RDITQRKAADEKIHHLA-FYDPLTELPNRQLLLDRLEQALADCTITRQEGVLMFIDLDNF 599 Query: 97 VLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLL 156 ++ D S + + + + K +A L G V ++ Sbjct: 600 KILNDTV--GHSKGDLLLQKVAVRLKGC-VRKLDTVARLGGDEFV----VMLQDLGTQPE 652 Query: 157 KNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETK 216 + + +++ Sbjct: 653 AAT--------------------------------RKAQIVAEKVLATLREPYDLAGYQH 680 Query: 217 IAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYLMSVRMR------PGRE 267 + + V + M +C++ ++ + Sbjct: 681 YSTSSIGVTPFNARQGSVSELLKQADLAMYQAKTMGRNTVCFFDPDMQASVSANAALSTD 740 Query: 268 IMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPL 327 + ++ QF V YQP VD + R+TG+E LLRW+HP G + P FI AE +I+PL Sbjct: 741 LRAGLREHQFLVHYQPQVD-REQRITGVEALLRWKHPQRGMVSPAEFIPVAEETGLILPL 799 Query: 328 TQHLFELIARDAAELEKV-LPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVL 386 Q + E A +K G+ +N++ F + + + L Sbjct: 800 GQWVLEQACLQLAVWQKRPETAGLSIAVNVSVRQFRHPDFVDMVMAAIKHTGIQPHNLKL 859 Query: 387 EITERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINA 445 E+TE + E A L ++GV +A+DDFG G+S+L YL+R LD LKID+ FI Sbjct: 860 ELTESLLADRMEIAIAKMGTLKALGVTLALDDFGMGYSSLSYLKRLPLDQLKIDKSFIAD 919 Query: 446 IGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDD 505 + ++ + + A+++LA+ L + +AEGVET Q +L+ G + QG+ PLP+ + Sbjct: 920 VFSDPNDAAICSAIISLAQSLGLDVIAEGVETEAQRSFLAGLGCGYYQGFLFCPPLPIAE 979 Query: 506 FVRWLKKPYTP 516 F ++ + P Sbjct: 980 FEAFM-QGAAP 989 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 96/488 (19%), Positives = 178/488 (36%), Gaps = 57/488 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDRLQ--PLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ ++L L +R+ Q + +++ Sbjct: 344 DITEHKNSRAQIEFLAH-HDALTGLPNRILLNDRLEMAITQVRRQGEKLGILFIDL---- 398 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 ++ + +L+ Sbjct: 399 ----------------------------------------DRFKNVNDSLGHGVGDQILQ 418 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 + N+ ++ E + L+ + +L +L + Sbjct: 419 EAAKRLTANVRTGDTVSRLGGDEFVVLFPRVRTEGNLADLTIKLREQLQLPYTVDGISLH 478 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMSG---TVVGLLCYYLMSV------RMRPGREI 268 + + +Y DD + M +Y ++ R++ ++ Sbjct: 479 ITPSIGIAVYPDDGEDPNTLIKNADAAMYLAKEKGRNNYQFYTPTLNAKTLDRLKLESDL 538 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 +AI F + YQP + + ++ GLE L+RWRH G I P FI AE +IV L Sbjct: 539 RSAIDAGDFELHYQPQIIGSSGQLWGLEALIRWRHRERGLISPAEFIPLAEETGLIVGLG 598 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + AE + + +NI+ F ++ +L I LE+ Sbjct: 599 DWVLVQAVKQLAEWRRQGHNHLVVSVNISALQFRQGDFLDRVKHILQEAQLVPDAIELEL 658 Query: 389 TERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE ++++ + A Q L +G IAIDDFGTG S+L YL ++ LKID+ F+ + Sbjct: 659 TETMLMQDVQSAIQTLKGLRELGFRIAIDDFGTGFSSLNYLRHLPINVLKIDQSFVREML 718 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 E + ++++++ LA+ L T+AEGVET + L RG MQGY+ +RP+P F Sbjct: 719 QEPESLAIVESIIALAQALGKETIAEGVETRAEFDVLQARGCRLMQGYFFARPMPPVIFD 778 Query: 508 RWLKKPYT 515 +W ++ Sbjct: 779 QWYQQQTQ 786 >UniRef50_B0SAR7 Signal transduction protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SAR7_LEPBA Length = 694 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 100/484 (20%), Positives = 192/484 (39%), Gaps = 57/484 (11%) Query: 40 EVKYDTLITDVQKYLDTYFADLKSTTDR--LQPLTLDTCQQANPELTARAAFSMNVRTFV 97 ++ + Y+ +F L + +R L ++A ++++ F Sbjct: 249 DITQRRHAEEKIAYMA-FFDQLTNLPNRNSLIDKLFPIFEEARRHGNLVGILAIDLDNFK 307 Query: 98 LVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLK 157 ++ D + ++ + I Sbjct: 308 IINDSR--GHDFGDKIIKLVAYRIRE---------------------------------- 331 Query: 158 NSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKI 217 ++ + + E + + + S +++ + E Sbjct: 332 --------SIRVYDLISRQGGDEFTVVLPDLSNERDAAVISESILDAMTHPFVIDGERIF 383 Query: 218 AGIPLTVRLYADDWTWNDVWYAFLLGGMS-GTVVGLLCYYLMSV--------RMRPGREI 268 I + + LY D ++ ++ G CY + R+ + Sbjct: 384 VNISIGIALYPTDGKDSNTLLKNADSALNLAKSQGKNCYVFFTEELQTVVAERLEIENRM 443 Query: 269 MTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLT 328 AI QF + YQP +D + G+E L+RWRHP G I P+ FI +E MI+ + Sbjct: 444 RIAIIENQFTLMYQPKIDLYTRKPVGVEALIRWRHPERGLISPNVFIPISEETGMILAIG 503 Query: 329 QHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEI 388 + + + + E + + +NI+ E + I + L + +E+ Sbjct: 504 EWVIKSAIKTMREWKDHGVKDISMAVNISTKQFKHERLISTIAENLKLYKVDPHDLEVEL 563 Query: 389 TERDMLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIG 447 TE +++ + A + + +G +IAIDDFGTG+S+L YL++ + LKIDR F++ I Sbjct: 564 TESSVMENADAAVRTMQEIRKLGAKIAIDDFGTGYSSLGYLKKLPISSLKIDRSFVSEIT 623 Query: 448 TETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFV 507 T+ + ++ AV LA L + VAEG ET EQ R L+E GV+ +QG++ ++P+ +D + Sbjct: 624 TDKDSKTIIHAVSNLAHNLGLSVVAEGAETEEQVRLLAESGVDQIQGFYFAKPMTSEDCL 683 Query: 508 RWLK 511 +LK Sbjct: 684 HFLK 687 >UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SP12_9RHIZ Length = 894 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 98/420 (23%), Positives = 166/420 (39%), Gaps = 25/420 (5%) Query: 117 LNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLT------ 170 L L + + AIL + I N L N + L Sbjct: 471 LTGLPNRALLQDRLSQAILHAQRYDRWVSVVFIDLDNFKLINDTLGHNAGDRLLKTVAER 530 Query: 171 --------PSLFYSSRQEDYDGVALII-GNTALSTFSSRLMNVNELTDMPVRETKIAGIP 221 ++ E ++ ++ +L A Sbjct: 531 MVGCISSTDTIVRLGGDEFVLVLSDQPKNVDLIAETLQKLRTAIAEPLQLGDHCVRATAS 590 Query: 222 LTVRLYADDWTWNDVWYAFLLGGMSGTV---VGLLCYYL------MSVRMRPGREIMTAI 272 + + Y D + A M +Y R E+ TA+ Sbjct: 591 IGIATYPKDGKAPESLVANADAAMYRAKAVGRDNFQFYAPEFNTRAHERFLLQEELRTAL 650 Query: 273 KREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLF 332 R QF + YQP +D +++++ +E L+RW HP G + P FI AE +IVP+ + Sbjct: 651 ARSQFELFYQPQIDLRSVQIVAVEALIRWNHPAHGAMAPVGFIPTAEETGLIVPIGDWVL 710 Query: 333 ELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERD 392 R + + + +N++ ++ + L+ + LE+TE Sbjct: 711 HEACRQNKAWQDLGLEPITVSVNVSARQFSEKNLVERVVHALSESDLEGCYLELELTESL 770 Query: 393 MLKEQE-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETI 451 ++++ A L S+GV+I+IDDFGTG+S+L L+ F + LKID+ FI+ + T Sbjct: 771 IMQDVGLAVTTMNKLQSLGVQISIDDFGTGYSSLSALKTFPIARLKIDKSFIDDVATNED 830 Query: 452 TSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLK 511 V AV++L ++L M +AEGVET EQ +L + + MQGY S+P+ + R L+ Sbjct: 831 DQAVASAVISLGQKLKMRVIAEGVETDEQVAFLRKNNCDEMQGYHFSKPVCSREIERLLE 890 >UniRef50_B7GID3 Multidomain signal transduction protein (Contains GGDEF and EAL domains) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GID3_ANOFW Length = 552 Score = 480 bits (1237), Expect = e-134, Method: Composition-based stats. Identities = 98/416 (23%), Positives = 172/416 (41%), Gaps = 15/416 (3%) Query: 109 ATGEMDIP--LNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALN 166 TG + L+ L ++ + + L I Y N LLK Sbjct: 134 LTGVLSYESFLHLLRERMNKREPFALLSLNLDRFKFINDLIGYEYGNELLKQVAERLR-- 191 Query: 167 LNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRL 226 + ++ + I + ++ + + + V + Sbjct: 192 -RYENGIVARQARDQFFLAFYTIDRNEIRDMIRDVIQIFSTPFQLTDQELTITPSIGVSV 250 Query: 227 YADDWTWNDVWYAFLLGGMSGTVVGL---LCYYLMS------VRMRPGREIMTAIKREQF 277 + DD T +F + C+Y ++ I A+K+ +F Sbjct: 251 FPDDATDWTTLLSFADLALEIAKENGGNTYCFYTNELKKTNEEKLYIQHSIRKALKQNEF 310 Query: 278 YVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIAR 337 + YQP+VD Q + +E LLRW HP G I P FI AE +I P+ + + Sbjct: 311 TLHYQPIVDIQTGDIVAVEALLRWFHPKRGWISPATFIPIAEETNLIQPIGDWVLRNVCE 370 Query: 338 DAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQ 397 + + ++ V+ G+N++ I+ +L + F + LEITE + Sbjct: 371 QSKKWKEKGLPHVQIGVNVSIKQFLQADLVKHIEHVLRTYDLDPFCLKLEITESMAMHHI 430 Query: 398 E-ATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVL 456 + L +G+++A+DDFGTG+S+L YL++ +D +KIDR F+ + + ++ Sbjct: 431 DYVLAQLQSLKHLGLQLAVDDFGTGYSSLNYLKKLPVDIIKIDRSFVQDMVKHSYDLSIV 490 Query: 457 DAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK 512 AV+ +A L M VAEGVET EQ L G + QGY+ S+PL + F + +++ Sbjct: 491 RAVIQVAHSLQMKVVAEGVETEEQLAILKREGCDRAQGYYFSKPLAAEQFEQLVQQ 546 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.316 0.173 0.600 Lambda K H 0.267 0.0529 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,639,220,969 Number of Sequences: 3077464 Number of extensions: 236854387 Number of successful extensions: 532606 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 12916 Number of HSP's successfully gapped in prelim test: 2923 Number of HSP's that attempted gapping in prelim test: 483876 Number of HSP's gapped (non-prelim): 21454 length of query: 518 length of database: 1,040,396,356 effective HSP length: 133 effective length of query: 385 effective length of database: 631,093,644 effective search space: 242971052940 effective search space used: 242971052940 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 96 (41.2 bits)