298 d1juba_ Probab=42.60   E-value=19  Score=14.58  Aligned_columns=179  Identities=18%

Q ss_pred             HHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCHHHHHHHHHHHHCCCCHHHEEEEEEC-----HHHCCCHHHHHHHHHH
Q ss_conf             99999999998870689858999759789339417999999998739995309998301-----3314908999999999
Q batch____       332 FELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITE-----RDMLKEQEATQLFAWL  406 (518)
Q Consensus       332 l~~~~~~l~~~~~~~~~~~~i~inls~~~l~~~~~~~~l~~~l~~~~~~~~~l~lEi~e-----~~~~~~~~~~~~l~~l  406 (518)
                      ++...+.+....+......++.+|+....  ..++..........-..+.-.+-+..+.     ....+.....+.++.+
T Consensus        76 ~~~~~~~~~~~~~~~~~~~pi~~~i~~~~--~~~~~~~~~~~~~~~~a~~i~in~~~~~~~~~~~~~~~~~~~~~~i~~i  153 (311)
T d1juba_          76 FDYYLDYVLKNQKENAQEGPIFFSIAGMS--AAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEV  153 (311)
T ss_dssp             HHHHHHHHHHHHHHTCSSSCCEEEECCSS--HHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEEECCCCC--HHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHCCHHHHHHHHHHH
T ss_conf             89999999999986278946999716899--8999999987652358987733786655432003204989999999999


Q ss_pred             HH-----CCCEEEECCCCCC-CCCHHHHHHCCCCEEEEE--------------------HHHHCCCCCCHHHHHHHHHHH
Q ss_conf             87-----8989998277888-341689961799899971--------------------788613225955699999999
Q batch____       407 HS-----VGVEIAIDDFGTG-HSALIYLERFTLDYLKID--------------------RGFINAIGTETITSPVLDAVL  460 (518)
Q Consensus       407 ~~-----~G~~i~iddfG~~-~~~l~~l~~l~~d~iKid--------------------~~~v~~~~~~~~~~~~~~~i~  460 (518)
                      +.     .++++..+..+.. ......+.+.+.|.|.+.                    ..-...+.........+..+.
T Consensus       154 ~~~~~~pv~~k~~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~a~~~~~  233 (311)
T d1juba_         154 FTFFTKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVR  233 (311)
T ss_dssp             TTTCCSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHH
T ss_pred             HHHCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEECCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             97228941101047776400299998887379869997088653210223210000133444566464110468999999


Q ss_pred             HHHHHC--CCEEEE-EECCCHHHHHHHHHCCCCEEE---CCHHCCCCCHHHHHHHHCC
Q ss_conf             999975--990999-714998999999971998991---1611589998999998507
Q batch____       461 TLAKRL--NMLTVA-EGVETPEQARWLSERGVNFMQ---GYWISRPLPLDDFVRWLKK  512 (518)
Q Consensus       461 ~~a~~l--~i~via-egVe~~~q~~~l~~~g~~~~Q---G~~~~~P~~~~~~~~~l~~  512 (518)
                      .+.+..  +++||+ -||.+.++......+|.+..|   ++++.-|--..++++-|+.
T Consensus       234 ~~~~~~~~~ipii~~GGI~~~~dv~k~l~lGAdaV~igta~~~~g~~~~~~i~~eL~~  291 (311)
T d1juba_         234 AFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHKEGPAIFDRIIKELEE  291 (311)
T ss_dssp             HHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHCTHHHHHHHHHHHH
T ss_pred             HHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHHCCHHHHHHHHHHHHH
T ss_conf             9888507896699947879999999999729989999278885258999999999999