09/01/2012 00:40:24 : INFO  : Run start: Mon Jan  9 00:40:24 GMT 2012
09/01/2012 00:40:26 : INFO  : Initialised job
09/01/2012 00:40:27 : INFO  : Renaming log file 'phyre2_20120109_004023.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/d254323774fce9c3/phyre_20120109_004023.log'
09/01/2012 00:40:28 : INFO  : Initialised job:
Sequence
>batch____
MKRLIMATMVTAILASSTVWAADNAPVAAQQQTQQVQQTQKTAAAAERISEQGLYAMRDV
QVARLALFHGDPEKAKELTNEASALLSDDSTEWAKFAKPGKKTNLNDDQYIVINASVGIS
ESYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVMENQYLMPLKQTRNALADAQK
LLDKKQYYEANLALKGAEDGIIVDSEALFVN

09/01/2012 00:40:29 : INFO  : Checked sequence
09/01/2012 00:40:30 : INFO  : Finding homologues with PSI-BLAST
09/01/2012 00:40:30 : INFO  : PSI-BLAST 3 iterations
09/01/2012 00:41:23 : INFO  : PSI-BLAST 5 iterations
09/01/2012 00:41:49 : INFO  : Finished PSI-BLAST
09/01/2012 00:41:50 : INFO  : Running Buildali to generate a3m file
09/01/2012 00:43:54 : INFO  : Converting to HMM
09/01/2012 00:43:55 : INFO  : Calibrating HMM
09/01/2012 00:44:03 : INFO  : Searching HMM database
09/01/2012 00:48:47 : INFO  : Finished buildali
09/01/2012 00:48:48 : INFO  : Predicting secondary structure
09/01/2012 00:48:52 : INFO  : Predicted secondary structure (PSI-Pred)
09/01/2012 00:48:52 : INFO  : Predicting Disordered regions
09/01/2012 00:48:54 : INFO  : Predicted Disorder (Disopred)
09/01/2012 00:48:55 : INFO  : Running memsat_svm check
09/01/2012 00:51:03 : INFO  : Globular protein
09/01/2012 00:51:03 : INFO  : Predicted Transmembrane (memsat_svm) ID 'd254323774fce9c3'
09/01/2012 00:51:04 : INFO  : Initialising fold library search
09/01/2012 00:51:06 : INFO  : Initialised search input
09/01/2012 00:51:07 : INFO  : Building Ensemble models
09/01/2012 00:51:09 : INFO  : Building hh.c3dzaB_.model.1.pdb
09/01/2012 00:51:16 : INFO  : Building c3dzaB_.1.pdb
09/01/2012 00:51:23 : INFO  : Building c2kc7A_.2.pdb
09/01/2012 00:51:29 : INFO  : Building d2gy9t1.3.pdb
09/01/2012 00:51:36 : INFO  : Building d2uubt1.4.pdb
09/01/2012 00:51:42 : INFO  : Building c3ly8A_.5.pdb
09/01/2012 00:51:48 : INFO  : Building d1qsaa1.6.pdb
09/01/2012 00:51:55 : INFO  : Building c3k1sE_.7.pdb
09/01/2012 00:52:02 : INFO  : Building c1wao4_.8.pdb
09/01/2012 00:52:09 : INFO  : Building c1wcrA_.9.pdb
09/01/2012 00:52:16 : INFO  : Building d2crba1.10.pdb
09/01/2012 00:52:22 : INFO  : Building c3l8rA_.11.pdb
09/01/2012 00:52:28 : INFO  : Building d2e2aa_.12.pdb
09/01/2012 00:52:34 : INFO  : Building d2ijqa1.13.pdb
09/01/2012 00:52:40 : INFO  : Building d1hxia_.14.pdb
09/01/2012 00:52:46 : INFO  : Building d1hz4a_.15.pdb
09/01/2012 00:52:54 : INFO  : Building c2l6jA_.16.pdb
09/01/2012 00:53:00 : INFO  : Building c3k1iA_.17.pdb
09/01/2012 00:53:06 : INFO  : Building d256ba_.18.pdb
09/01/2012 00:53:14 : INFO  : Building c2c2lD_.19.pdb
09/01/2012 00:53:20 : INFO  : Building c1vh6A_.20.pdb
09/01/2012 00:53:34 : INFO  : Finished HH model building
09/01/2012 00:53:35 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
09/01/2012 00:54:19 : INFO  : html domain output complete ID 'd254323774fce9c3'
09/01/2012 01:01:24 : INFO  : Run end  : Mon Jan  9 01:01:24 GMT 2012
