BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (302 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P77744 HTH-type transcriptional regulator abgR n=48 Tax... 623 e-177 UniRef50_D0YA85 Transcriptional regulator, LysR family n=5 Tax=K... 463 e-129 UniRef50_C3KNJ1 Putative transcriptional regulator, LysR-type n=... 174 3e-42 UniRef50_Q46UX6 Transcriptional regulator, LysR family n=4 Tax=C... 171 2e-41 UniRef50_UPI0001826865 hypothetical protein EcanA3_10858 n=1 Tax... 161 3e-38 UniRef50_B2T4Q8 Transcriptional regulator, LysR family n=3 Tax=B... 157 3e-37 UniRef50_Q3JHY3 LysR-family transcriptional regulator n=44 Tax=B... 157 5e-37 UniRef50_Q39P96 Transcriptional regulator, LysR family n=3 Tax=c... 155 2e-36 UniRef50_A3DB82 Transcriptional regulator, LysR family n=4 Tax=G... 155 2e-36 UniRef50_B7RS97 Transcriptional regulator, LysR family n=1 Tax=R... 154 4e-36 UniRef50_D0ZGE3 DNA-binding transcriptional activator n=2 Tax=Ed... 149 2e-34 UniRef50_C4ST67 Transcriptional regulator, LysR family n=2 Tax=Y... 146 1e-33 UniRef50_Q12CP1 Transcriptional regulator, LysR family n=1 Tax=P... 145 2e-33 UniRef50_P94678 LysR type regulator of tsaMBCD n=1 Tax=Comamonas... 145 2e-33 UniRef50_A4XNT0 Transcriptional regulator, LysR family n=2 Tax=P... 142 2e-32 UniRef50_D1UCJ8 Transcriptional regulator, LysR family n=1 Tax=B... 141 3e-32 UniRef50_B2U625 HTH-type transcriptional regulator TdcA n=1 Tax=... 141 3e-32 UniRef50_C1M9S9 DNA-binding transcriptional activator TdcA n=3 T... 138 3e-31 UniRef50_Q141G8 Transcriptional regulator, LysR family n=6 Tax=B... 137 3e-31 UniRef50_B9Z0I5 Transcriptional regulator, LysR family n=1 Tax=L... 137 4e-31 UniRef50_A0AXF9 Transcriptional regulator, LysR family n=9 Tax=B... 137 6e-31 UniRef50_A9AQ38 LysR family transcriptional regulator n=7 Tax=Pr... 136 9e-31 UniRef50_D0IX04 Transcriptional regulator, LysR family n=1 Tax=C... 136 1e-30 UniRef50_P0ACQ8 HTH-type transcriptional regulator tdcA n=105 Ta... 135 2e-30 UniRef50_UPI0001C33D15 DNA-binding transcriptional activator Tdc... 134 3e-30 UniRef50_B1Z3Z1 Transcriptional regulator, LysR family n=16 Tax=... 134 5e-30 UniRef50_D1TFB5 Transcriptional regulator-like protein n=1 Tax=B... 132 1e-29 UniRef50_B1Z1E9 Transcriptional regulator, LysR family n=50 Tax=... 132 2e-29 UniRef50_A3V8N8 LysR-family transcriptional regulator n=1 Tax=Lo... 130 8e-29 UniRef50_C4ZM05 Transcriptional regulator, LysR family n=1 Tax=T... 129 9e-29 UniRef50_Q2G7Q5 Transcriptional regulator, LysR family n=1 Tax=N... 129 1e-28 UniRef50_A9BN68 Transcriptional regulator, LysR family n=1 Tax=D... 129 1e-28 UniRef50_Q1LC50 Transcriptional regulator, LysR family n=1 Tax=C... 127 5e-28 UniRef50_A4BGZ4 Transcriptional regulator, LysR family protein n... 127 5e-28 UniRef50_Q13L80 Transcriptional regulator, LysR family n=6 Tax=B... 127 6e-28 UniRef50_C4ZKY3 Transcriptional regulator, LysR family n=2 Tax=B... 125 1e-27 UniRef50_C4ZIH4 Transcriptional regulator, LysR family n=1 Tax=T... 125 2e-27 UniRef50_B2UBD9 Transcriptional regulator, LysR family n=8 Tax=B... 125 2e-27 UniRef50_Q46W38 Transcriptional regulator, LysR family n=4 Tax=B... 124 5e-27 UniRef50_Q7WPE3 LysR-family transcriptional regulator n=1 Tax=Bo... 123 7e-27 UniRef50_Q39PG2 Transcriptional regulator, LysR family n=1 Tax=B... 123 9e-27 UniRef50_B1J1Q5 Transcriptional regulator, LysR family n=21 Tax=... 121 3e-26 UniRef50_C3KMF5 Transcriptional regulator, LysR family n=42 Tax=... 121 3e-26 UniRef50_P52686 SDS degradation transcriptional activation prote... 120 8e-26 UniRef50_B5JN19 Putative uncharacterized protein n=1 Tax=Verruco... 120 8e-26 UniRef50_C4KR89 Transcriptional regulator, LysR family n=67 Tax=... 119 1e-25 UniRef50_Q2KVE3 LysR-family transcriptional regulator n=1 Tax=Bo... 119 2e-25 UniRef50_A6UB72 Transcriptional regulator, LysR family n=1 Tax=S... 119 2e-25 UniRef50_B2JPX7 Transcriptional regulator, LysR family n=14 Tax=... 118 2e-25 UniRef50_Q0K3Z3 Transcriptional regulator, LysR-family n=1 Tax=R... 118 3e-25 UniRef50_A5V773 Transcriptional regulator, LysR family n=2 Tax=A... 117 5e-25 UniRef50_Q5DZJ6 Predicted DNA-binding transcriptional regulator ... 117 6e-25 UniRef50_Q1R0T5 Transcriptional regulator, LysR family n=2 Tax=C... 116 1e-24 UniRef50_C1A9Z7 LysR family transcriptional regulator n=1 Tax=Ge... 116 1e-24 UniRef50_P77171 Uncharacterized HTH-type transcriptional regulat... 115 1e-24 UniRef50_B2T7R4 Transcriptional regulator, LysR family n=5 Tax=B... 115 1e-24 UniRef50_A6W282 Transcriptional regulator, LysR family n=10 Tax=... 115 2e-24 UniRef50_Q1QYT3 Transcriptional regulator, LysR family n=1 Tax=C... 114 3e-24 UniRef50_Q2CED4 Transcriptional regulator n=1 Tax=Oceanicola gra... 114 4e-24 UniRef50_P0A4T6 HTH-type transcriptional regulator pcaQ n=10 Tax... 113 8e-24 UniRef50_Q46NY0 Transcriptional regulator, LysR family n=1 Tax=R... 112 2e-23 UniRef50_D1XD01 Transcriptional regulator, LysR family n=1 Tax=S... 112 2e-23 UniRef50_Q1GJ71 Transcriptional regulator, LysR family n=1 Tax=R... 111 3e-23 UniRef50_Q2G4H1 Transcriptional regulator, LysR family n=4 Tax=S... 111 4e-23 UniRef50_Q11H84 Transcriptional regulator, LysR family n=1 Tax=C... 110 5e-23 UniRef50_B8KBX3 Transcriptional regulator, LysR family n=1 Tax=V... 110 6e-23 UniRef50_D2AWV2 LysR family transcriptional regulator n=3 Tax=Ac... 110 7e-23 UniRef50_B8CQS4 Transcriptional regulator, LysR family n=1 Tax=S... 110 7e-23 UniRef50_Q1DBZ6 Transcriptional regulator, LysR family n=1 Tax=M... 109 1e-22 UniRef50_A7IF06 Transcriptional regulator, LysR family n=5 Tax=A... 109 1e-22 UniRef50_Q0K1W4 Transcriptional regulator (Transcriptional regul... 109 1e-22 UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=P... 109 1e-22 UniRef50_Q21B25 Transcriptional regulator, LysR family n=2 Tax=B... 109 1e-22 UniRef50_A1B7R5 Transcriptional regulator, LysR family n=10 Tax=... 108 2e-22 UniRef50_D2BTL7 Transcriptional regulator, LysR family n=1 Tax=D... 108 2e-22 UniRef50_B1Z4Z1 Transcriptional regulator, LysR family n=5 Tax=P... 108 3e-22 UniRef50_Q1GG87 Transcriptional regulator, LysR family n=4 Tax=R... 108 3e-22 UniRef50_A8GER4 Transcriptional regulator, LysR family n=2 Tax=S... 107 4e-22 UniRef50_B2TGB5 Transcriptional regulator, LysR family n=2 Tax=B... 107 4e-22 UniRef50_C0ZVG6 Putative LysR family transcriptional regulator n... 107 6e-22 UniRef50_C7I3E5 Transcriptional regulator, LysR family n=1 Tax=T... 107 7e-22 UniRef50_B5YJV7 Transcriptional regulator n=1 Tax=Thermodesulfov... 107 7e-22 UniRef50_Q1R0R5 Transcriptional regulator, LysR family n=1 Tax=C... 106 9e-22 UniRef50_Q221U4 Transcriptional regulator, LysR family n=2 Tax=C... 106 1e-21 UniRef50_C1XNG0 Transcriptional regulator, COG0583 n=2 Tax=Meiot... 106 1e-21 UniRef50_C8Q1V0 Transcriptional regulator, LysR family n=1 Tax=P... 105 1e-21 UniRef50_B8KMT5 Transcriptional regulator, LysR family n=1 Tax=g... 105 1e-21 UniRef50_C6WP46 Transcriptional regulator, LysR family n=1 Tax=A... 105 2e-21 UniRef50_A3UKE5 Probable transcriptional regulator n=1 Tax=Ocean... 105 2e-21 UniRef50_B0RYQ5 Transcriptional regulator, LysR family n=11 Tax=... 105 2e-21 UniRef50_Q1YUG7 Transcriptional regulator n=1 Tax=gamma proteoba... 105 2e-21 UniRef50_A5VC48 Transcriptional regulator, LysR family n=1 Tax=S... 105 2e-21 UniRef50_B5JLL8 Putative uncharacterized protein n=1 Tax=Verruco... 104 3e-21 UniRef50_P77782 Pep2 n=2 Tax=root RepID=P77782_ENTAE 104 4e-21 UniRef50_A1WHL2 Transcriptional regulator, LysR family n=10 Tax=... 104 4e-21 UniRef50_B8IWD6 Transcriptional regulator, LysR family n=1 Tax=M... 104 4e-21 UniRef50_A1WN33 Transcriptional regulator, LysR family n=1 Tax=V... 104 4e-21 UniRef50_Q47P44 Putative LysR-family transcriptional regulator n... 104 4e-21 UniRef50_C8WSN1 Transcriptional regulator, LysR family n=1 Tax=A... 104 4e-21 UniRef50_Q46QI8 Regulatory protein, LysR:LysR, substrate-binding... 104 5e-21 UniRef50_A5EKL1 Transcriptional regulator, LysR family n=2 Tax=B... 103 6e-21 UniRef50_B1FSS9 Transcriptional regulator, LysR family n=1 Tax=B... 103 6e-21 UniRef50_B2JVU4 Transcriptional regulator, LysR family n=43 Tax=... 103 6e-21 UniRef50_B0RTV9 Transcriptional regulator, LysR family n=11 Tax=... 103 7e-21 UniRef50_Q46WN8 Transcriptional regulator, LysR family n=3 Tax=C... 103 1e-20 UniRef50_Q4KE95 Transcriptional regulator, LysR family n=7 Tax=P... 102 1e-20 UniRef50_D0DE25 Pca operon transcriptional activator PcaQ n=1 Ta... 102 2e-20 UniRef50_Q1YFP6 Putative pca operon transcription factor PcaQ n=... 102 2e-20 UniRef50_B1J4U2 Transcriptional regulator, LysR family n=2 Tax=P... 102 2e-20 UniRef50_B1XZI4 Transcriptional regulator, LysR family n=1 Tax=L... 101 3e-20 UniRef50_Q1M6M7 Putative LysR family transcriptional regulator n... 101 3e-20 UniRef50_A5VH98 Transcriptional regulator, LysR family n=1 Tax=S... 101 4e-20 UniRef50_Q46PU2 Transcriptional regulator, LysR family n=1 Tax=R... 101 4e-20 UniRef50_C0CTN6 Putative uncharacterized protein n=1 Tax=Clostri... 101 4e-20 UniRef50_B9KUK0 Transcriptional regulator n=2 Tax=Rhodobacterace... 101 4e-20 UniRef50_Q2NZJ9 Transcriptional regulator n=9 Tax=Xanthomonas Re... 100 4e-20 UniRef50_Q88JE8 Transcriptional regulator, LysR family n=4 Tax=P... 100 5e-20 UniRef50_C4KVR2 Transcriptional regulator, LysR family n=25 Tax=... 100 5e-20 UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=R... 100 6e-20 UniRef50_B5XV59 Transcriptional regulator, LysR family n=5 Tax=K... 100 7e-20 UniRef50_Q7W9G9 Probable LysR-family transcriptional regulator n... 100 7e-20 UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=G... 100 8e-20 UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Ba... 100 8e-20 UniRef50_UPI0001C3136F transcriptional regulator, MarR family n=... 100 8e-20 UniRef50_A9AT28 LysR family transcriptional regulator n=9 Tax=Bu... 100 8e-20 UniRef50_A3VLR4 Putative LysR family transcriptional regulator n... 100 9e-20 UniRef50_B1YXM2 Transcriptional regulator, LysR family n=3 Tax=B... 100 1e-19 UniRef50_B8IBA3 Transcriptional regulator, LysR family n=1 Tax=M... 100 1e-19 UniRef50_Q1LLE9 Transcriptional regulator, LysR family n=2 Tax=B... 99 2e-19 UniRef50_Q1AVR3 Transcriptional regulator, LysR family n=1 Tax=R... 99 2e-19 UniRef50_A3VCK6 Pca operon transcriptional activator PcaQ n=2 Ta... 99 2e-19 UniRef50_A8IAC4 Transcriptional regulator n=1 Tax=Azorhizobium c... 99 2e-19 UniRef50_A3K824 Transcriptional regulator, LysR family protein n... 99 2e-19 UniRef50_Q0B1K1 Transcriptional regulator, LysR family n=2 Tax=B... 99 2e-19 UniRef50_C6B6X6 Transcriptional regulator, LysR family n=1 Tax=R... 99 2e-19 UniRef50_A1WHM4 Transcriptional regulator, LysR family n=1 Tax=V... 99 2e-19 UniRef50_C5CTK1 Transcriptional regulator, LysR family n=1 Tax=V... 99 3e-19 UniRef50_A6F002 Transcriptional regulator, LysR family protein n... 98 3e-19 UniRef50_C5SQ96 Transcriptional regulator, LysR family n=1 Tax=A... 98 3e-19 UniRef50_B2Q0Q6 Putative uncharacterized protein n=1 Tax=Provide... 98 3e-19 UniRef50_A3K882 Transcriptional regulator, LysR family, putative... 98 3e-19 UniRef50_D0I933 Putative transcriptional regulatory protein LysR... 98 4e-19 UniRef50_B7X3R9 Transcriptional regulator, LysR family n=1 Tax=C... 98 4e-19 UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=C... 98 4e-19 UniRef50_C1F7X5 Transcriptional regulator, LysR family n=1 Tax=A... 98 4e-19 UniRef50_C9NWS4 LysR family transcriptional regulator n=1 Tax=Vi... 98 4e-19 UniRef50_D2QVQ4 Transcriptional regulator, LysR family n=22 Tax=... 97 5e-19 UniRef50_C0WJJ1 LysR family transcriptional regulator n=4 Tax=Co... 97 6e-19 UniRef50_D0J615 Transcriptional regulator, LysR family n=2 Tax=C... 97 6e-19 UniRef50_A9I9V5 Transcriptional regulator, LysR-family n=1 Tax=B... 97 7e-19 UniRef50_C4DFU1 Transcriptional regulator, COG0583 n=1 Tax=Stack... 97 7e-19 UniRef50_C1B6M2 Putative LysR family transcriptional regulator n... 97 8e-19 UniRef50_B7RV59 LysR substrate binding domain protein n=1 Tax=ma... 97 8e-19 UniRef50_Q7W5Y3 LysR-type transcriptional regulator n=3 Tax=Bord... 97 9e-19 UniRef50_B6R3G2 Transcriptional regulator, LysR family n=1 Tax=P... 97 9e-19 UniRef50_B6A4Z6 Transcriptional regulator, LysR family n=1 Tax=R... 97 9e-19 UniRef50_B1M1C3 Transcriptional regulator, LysR family n=1 Tax=M... 97 1e-18 UniRef50_B1J741 Transcriptional regulator, LysR family n=4 Tax=P... 97 1e-18 UniRef50_Q0SIM5 Transcriptional regulator, LysR family protein n... 96 1e-18 UniRef50_A9VQL8 Transcriptional regulator, LysR family n=8 Tax=B... 96 1e-18 UniRef50_UPI0001C3125C transcriptional regulator, LysR family n=... 96 1e-18 UniRef50_B8G0C5 Transcriptional regulator, LysR family n=2 Tax=D... 96 1e-18 UniRef50_Q92Y80 Transcriptional regulator, LysR family n=2 Tax=R... 96 1e-18 UniRef50_C3JP42 Transcriptional regulator, LysR family n=4 Tax=A... 96 1e-18 UniRef50_Q7WC04 Regulatory protein n=2 Tax=Bordetella RepID=Q7WC... 96 1e-18 UniRef50_A3VB04 Transcriptional regulator, LysR family protein n... 96 1e-18 UniRef50_Q15NZ1 Transcriptional regulator, LysR family n=2 Tax=G... 96 1e-18 UniRef50_Q1QWP9 Transcriptional regulator, LysR family n=1 Tax=C... 96 1e-18 UniRef50_Q2T4S2 Transcriptional regulator, LysR family, putative... 96 2e-18 UniRef50_A5G2D8 Transcriptional regulator, LysR family n=1 Tax=A... 96 2e-18 UniRef50_P52696 Uncharacterized HTH-type transcriptional regulat... 96 2e-18 UniRef50_B5JK93 Putative uncharacterized protein n=1 Tax=Verruco... 96 2e-18 UniRef50_B2JRL2 Transcriptional regulator, LysR family n=2 Tax=c... 96 2e-18 UniRef50_D2P368 Transcription activator of glutamate synthase op... 96 2e-18 UniRef50_A9BU39 Transcriptional regulator, LysR family n=1 Tax=D... 96 2e-18 UniRef50_A4YQI9 Transcriptional regulator of protochatechuate de... 95 2e-18 UniRef50_Q28JN5 Transcriptional regulator, LysR family n=3 Tax=R... 95 2e-18 UniRef50_B3FNL1 PsfB n=1 Tax=Pseudomonas putida RepID=B3FNL1_PSEPU 95 2e-18 UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepI... 95 3e-18 UniRef50_A4X3Q6 Regulatory protein, LysR n=2 Tax=Salinispora tro... 95 3e-18 UniRef50_B9Y467 Putative uncharacterized protein n=1 Tax=Holdema... 95 3e-18 UniRef50_C4GDC9 Putative uncharacterized protein n=2 Tax=Bacteri... 95 3e-18 UniRef50_Q46R60 Regulatory protein, LysR:LysR, substrate-binding... 95 3e-18 UniRef50_A6VSL4 Transcriptional regulator, LysR family n=1 Tax=M... 95 3e-18 UniRef50_Q398Q0 Transcriptional regulator, LysR family n=6 Tax=B... 95 3e-18 UniRef50_A9BLF7 Transcriptional regulator, LysR family n=2 Tax=C... 95 4e-18 UniRef50_Q0C276 Transcriptional regulator, LysR family n=1 Tax=H... 95 4e-18 UniRef50_Q7WNL3 LysR-family transcriptional regulator n=1 Tax=Bo... 94 4e-18 UniRef50_B2T4S2 Transcriptional regulator, LysR family n=18 Tax=... 94 4e-18 UniRef50_C7QFB4 Transcriptional regulator, LysR family n=1 Tax=C... 94 4e-18 UniRef50_B6JJI4 Transcriptional regulator of LysR family n=1 Tax... 94 4e-18 UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=... 94 4e-18 UniRef50_Q1M711 Putative LysR family transcriptional regulator n... 94 4e-18 UniRef50_A3XE67 Pca operon transcriptional activator PcaQ n=4 Ta... 94 5e-18 UniRef50_A9IJW2 Transcriptional regulator, LysR-family n=1 Tax=B... 94 5e-18 UniRef50_B7V886 Probable transcriptional regulator n=7 Tax=Pseud... 94 5e-18 UniRef50_O66882 Transcriptional regulator (LysR family) n=1 Tax=... 94 5e-18 UniRef50_B9BJK8 Transcriptional regulator, LysR family n=6 Tax=B... 94 5e-18 UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=... 94 6e-18 UniRef50_B1Z8M4 Transcriptional regulator, LysR family n=5 Tax=R... 94 6e-18 UniRef50_A4XPG0 Transcriptional regulator, LysR family n=1 Tax=P... 94 6e-18 UniRef50_C0WD61 Transcriptional regulator n=1 Tax=Acidaminococcu... 94 6e-18 UniRef50_A6QK31 Transcriptional regulator LysR family protein n=... 94 6e-18 UniRef50_A6ULR6 Transcriptional regulator, LysR family n=1 Tax=S... 94 6e-18 UniRef50_C5EI83 Transcriptional regulator n=2 Tax=Clostridiales ... 94 6e-18 UniRef50_Q67SW7 LysR family transcriptional regulator n=1 Tax=Sy... 94 7e-18 UniRef50_Q12FV7 Transcriptional regulator, LysR family n=4 Tax=B... 94 7e-18 UniRef50_B9Z4I9 Transcriptional regulator, LysR family n=1 Tax=L... 94 7e-18 UniRef50_Q5X4A2 Hydrogen peroxide-inducible genes activator n=4 ... 94 7e-18 UniRef50_P52661 HTH-type transcriptional regulator gbpR n=1 Tax=... 94 7e-18 UniRef50_B8G0Z2 Transcriptional regulator, LysR family n=4 Tax=F... 94 7e-18 UniRef50_B0TCS4 Transcriptional regulator, lysr family n=2 Tax=F... 94 8e-18 UniRef50_UPI0001B560AD transcriptional regulator, LysR family pr... 94 8e-18 UniRef50_C9YBM2 Putative uncharacterized protein n=2 Tax=cellula... 94 8e-18 UniRef50_C5CZT3 Transcriptional regulator, LysR family n=1 Tax=V... 94 8e-18 UniRef50_A0Q4Y0 Transcriptional regulator, LysR family n=13 Tax=... 93 9e-18 UniRef50_Q5YBA0 TfdR n=1 Tax=Sphingomonas sp. tfd44 RepID=Q5YBA0... 93 9e-18 UniRef50_B7VQD4 Transcriptional regulators, LysR family n=7 Tax=... 93 9e-18 UniRef50_B9JPF3 LysR-like Transcriptional Regulator n=3 Tax=Agro... 93 9e-18 UniRef50_Q7WPW7 LysR family regulatory protein n=4 Tax=Bordetell... 93 9e-18 UniRef50_A8H7F3 Transcriptional regulator, LysR family n=1 Tax=S... 93 9e-18 UniRef50_D0IVG8 L-carnitine dehydratase/bile acid-inducible n=1 ... 93 1e-17 UniRef50_Q4K9Z6 Transcriptional regulator, LysR family n=1 Tax=P... 93 1e-17 UniRef50_D1T293 Transcriptional regulator, LysR family n=1 Tax=A... 93 1e-17 UniRef50_A8FC52 LysR family transcriptional regulator n=4 Tax=Ba... 93 1e-17 UniRef50_A4J1K6 Transcriptional regulator, LysR family n=1 Tax=D... 93 1e-17 UniRef50_A5FEQ6 Transcriptional regulator, LysR family n=1 Tax=F... 93 1e-17 UniRef50_A6AKU4 Transcriptional regulator, LysR family n=1 Tax=V... 93 1e-17 UniRef50_Q127N6 Transcriptional regulator, LysR family n=1 Tax=P... 93 1e-17 UniRef50_C1F961 Transcriptional regulator, LysR family n=1 Tax=A... 93 1e-17 UniRef50_A7ZAT2 Putative HTH-type transcriptional regulator n=2 ... 92 2e-17 UniRef50_P27111 HTH-type transcriptional regulator cynR n=108 Ta... 92 2e-17 UniRef50_UPI00017889E9 transcriptional regulator, LysR family n=... 92 2e-17 UniRef50_A0AYH9 Transcriptional regulator, LysR family n=148 Tax... 92 2e-17 UniRef50_A4VG25 Probable transcriptional regulator n=1 Tax=Pseud... 92 2e-17 UniRef50_UPI0001AEC4E8 probable transcriptional regulator n=1 Ta... 92 2e-17 UniRef50_Q2KXV3 LysR-family transcriptional regulator n=1 Tax=Bo... 92 2e-17 UniRef50_B8IVL1 Transcriptional regulator, LysR family n=2 Tax=P... 92 2e-17 UniRef50_A6UBA0 Transcriptional regulator, LysR family n=7 Tax=c... 92 2e-17 UniRef50_C6XUT8 LysR substrate-binding n=1 Tax=Pedobacter hepari... 92 2e-17 UniRef50_B6WUU7 Putative uncharacterized protein n=1 Tax=Desulfo... 92 2e-17 UniRef50_Q1YUD1 Probable transcriptional regulator n=1 Tax=gamma... 92 2e-17 UniRef50_D2MBA7 Transcriptional regulator, LysR family n=1 Tax=R... 92 2e-17 UniRef50_Q8E8W2 Transcriptional regulator, LysR family n=1 Tax=S... 92 2e-17 UniRef50_A4BGW9 Transcriptional regulator n=1 Tax=Reinekea bland... 92 2e-17 UniRef50_B9JHQ9 Transcriptional regulator protein n=6 Tax=Rhizob... 92 3e-17 UniRef50_D0XP31 Transcriptional regulator, LysR family n=1 Tax=B... 92 3e-17 UniRef50_Q472M0 Transcriptional regulator, LysR family n=7 Tax=B... 92 3e-17 UniRef50_A7HFD0 Transcriptional regulator, LysR family n=1 Tax=A... 92 3e-17 UniRef50_D0D0K4 Transcriptional regulator n=1 Tax=Citreicella sp... 92 3e-17 >UniRef50_P77744 HTH-type transcriptional regulator abgR n=48 Tax=Enterobacteriaceae RepID=ABGR_ECOLI Length = 302 Score = 623 bits (1606), Expect = e-177, Method: Compositional matrix adjust. Identities = 302/302 (100%), Positives = 302/302 (100%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT Sbjct: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ Sbjct: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP Sbjct: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 Query: 181 AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF Sbjct: 181 AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL Sbjct: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 Query: 301 QS 302 QS Sbjct: 301 QS 302 >UniRef50_D0YA85 Transcriptional regulator, LysR family n=5 Tax=Klebsiella RepID=D0YA85_KLEVA Length = 308 Score = 463 bits (1191), Expect = e-129, Method: Compositional matrix adjust. Identities = 218/296 (73%), Positives = 255/296 (86%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 MAFQ+K H IRAFVEVAR+GSIRGASR L +SQPAL+K+I+ELEEGL+AQLF RRS+GV Sbjct: 7 MAFQIKFHHIRAFVEVAREGSIRGASRALAVSQPALTKAIKELEEGLSAQLFVRRSQGVA 66 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT+ GESFYQHASLILEELRAAQ+++ QRQG+ AGQINIG+GAS++RSLMP+VI RFHQQ Sbjct: 67 LTENGESFYQHASLILEELRAAQDELLQRQGEQAGQINIGLGASVARSLMPSVICRFHQQ 126 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 HPQVKVRIMEGQL++MINELRQGELDFTINTYY GPYDHEF+FEKL EK FA+F R GHP Sbjct: 127 HPQVKVRIMEGQLLAMINELRQGELDFTINTYYPGPYDHEFSFEKLFEKPFAVFARAGHP 186 Query: 181 AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 A A S+ +L+D+ WTMPTP GSY+KQL + L+ P+V +VCETFS+CISLV KSDF Sbjct: 187 AAQATSLGELMDHHWTMPTPRGSYFKQLQDRLNQAGLAPKVDIVCETFSSCISLVVKSDF 246 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 LS LP E+G DPL LVM+PV ++LP A YYLIQRRD+RQTPLTASLIT FRR+ Sbjct: 247 LSILPVELGNDPLMADKLVMIPVRDVLPTATYYLIQRRDTRQTPLTASLITLFRRQ 302 >UniRef50_C3KNJ1 Putative transcriptional regulator, LysR-type n=1 Tax=Rhizobium sp. NGR234 RepID=C3KNJ1_RHISN Length = 303 Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 101/291 (34%), Positives = 152/291 (52%), Gaps = 1/291 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ I+AF+ VA GSIR A+ LN+SQPALSK+IQELEE L+A L+ R + G T+ Sbjct: 2 IQLRHIKAFLAVADTGSIRTAALRLNVSQPALSKTIQELEEILSAPLYTRSAHGSMPTEF 61 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +F A +I E AQE+I Q G G++ +G+ A S + + RF +++P V Sbjct: 62 GRAFLHRARIIDTEFSRAQEEISQMVGAKGGKVAVGLSAIASMLMASQALERFWKKNPNV 121 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 VRI +G L ++ +RQGE DF + H+ T E L E + R GHP A Sbjct: 122 NVRISDGLLDRLVGGVRQGEFDFAVGGVPPSSLGHDLTIEPLFENRIVPVVRVGHPLADA 181 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSE-LLDDQAQTPQVGVVCETFSACISLVAKSDFLSK 243 RS+K L +W ++ +++ +D P+V + CE+FSA + ++ +D ++ Sbjct: 182 RSLKDLARANWLYTNDQPAFMALMNQHFVDHGVPPPRVLLTCESFSAVLDILPSTDLVAA 241 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 LP PL +V L + L+ R TPL ASL FR Sbjct: 242 LPRSCLTHPLVRARMVGLALDGGGSHTMVGLVTRAGVPLTPLAASLAKAFR 292 >UniRef50_Q46UX6 Transcriptional regulator, LysR family n=4 Tax=Cupriavidus RepID=Q46UX6_RALEJ Length = 332 Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 156/299 (52%), Gaps = 3/299 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ QI+ F+ VA GSIR A+R ++S PAL+KSI++LE+ L L R ++GV L+ Sbjct: 4 MRLSQIQDFIAVAEGGSIRAAARTRDVSAPALTKSIRQLEDELHVPLLTRTTRGVVLSHY 63 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+F + A LI E R A E++ Q G G + IG+ + L+PA ++RF +QHP+V Sbjct: 64 GEAFLRRARLIATEARRATEEMTQMLGARTGTVRIGVTGGPAHLLLPAALNRFRRQHPEV 123 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V I G+ + +LR G +D ++ DH+F E L + HP A Sbjct: 124 QVYIDSGRSAVHLQDLRAGLIDVAVSPIPDEGIDHDFICEPLYNNDSVVVAHQDHPLRHA 183 Query: 185 RSIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 R++++L+ W + T HG + P+V V C+TF+ +L+ L Sbjct: 184 RTLRELVGSEWILTTCRMHGPGAAIMDAFRAQDLPLPRVAVRCDTFNLIQALLQNRRLLC 243 Query: 243 KLPEEMGCDPLHGQ-GLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 + ++ D + GL +LP+ + LP LI R DS P+ AS Q RRE YL Sbjct: 244 MVARQLMQDRVGASTGLAVLPIEDPLPSHTVCLIYRADSPMPPVVASFAAQLRREAHYL 302 >UniRef50_UPI0001826865 hypothetical protein EcanA3_10858 n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001826865 Length = 302 Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 155/299 (51%), Gaps = 4/299 (1%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M + K+ + AF +VAR GSIR A+R L +SQP LS++++ELE+ L QL R +G+T Sbjct: 1 MNYLPKLGHLLAFRQVARSGSIRSAARELGVSQPGLSRTLRELEQTLGTQLLLRSKEGIT 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT+AG +F + A +LEELR A +++ Q G++ +G + I+ ++ P V F + Sbjct: 61 LTEAGMAFSRRAEWVLEELRRAADEVEQINHFTHGRLTVGFSSLIALTVFPGVADAFKET 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 PQV + EGQL S++ +R GE+D I + E L F I R GHP Sbjct: 121 LPQVLLTAKEGQLSSLLPGVRSGEIDIAIGSVDPMAPPEGVMIEPLFTSPFCIVARKGHP 180 Query: 181 AIGARSIKQLLDYSWTMPTPHGSYYKQL-SELLDDQAQTPQVGVVCETFSACISLVAKSD 239 AR + L W +P YY+QL +EL Q + ++ +++V +D Sbjct: 181 LAEARELMALRQAKWLLPESTMGYYQQLQNELSHFYRQVDVTPLRTDSVITGLNMVINAD 240 Query: 240 FLSKLPEEMGCDPLHGQG-LVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 +L+ + M C PL + LV LP+++ LP A Y + + S T + + R C Sbjct: 241 YLTVVARAM-CQPLQLEDKLVALPITQ-LPSAQYCAVWSQKSAMTTNARQFLIRLREAC 297 >UniRef50_B2T4Q8 Transcriptional regulator, LysR family n=3 Tax=Burkholderia RepID=B2T4Q8_BURPP Length = 310 Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 100/290 (34%), Positives = 150/290 (51%), Gaps = 1/290 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K +Q+RA V +A+ GSIR A++ + +SQPAL+K+I+E E+ L L R ++G LT Sbjct: 1 MKYNQLRALVAIAQHGSIRAAAKTVCLSQPALTKAIREFEQELGVPLVTRSARGAQLTQY 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++ Y A LIL E++ A++D+ GQ G ++ + +S + I F Q+ P+ Sbjct: 61 GQAVYTRAKLILAEMQHAKDDVVLLSGQEGGTVSCAVTPLVSLKYLSRAIHTFRQRMPKT 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + EG L + + LR G LDF I + EF F LLE + I R HP A Sbjct: 121 RLSVQEGFLTAALARLRDGSLDFVIAIVDEKKLAPEFMFRSLLECELIISARKAHPLANA 180 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAKSDFLSK 243 RSI L W + T S + L + T P+V V C +FSA SL S+ LS Sbjct: 181 RSIADLEGADWMLNTTPESIGQSLQDFFVQHGATAPRVVVECSSFSASFSLSVNSNLLSC 240 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 P+ + +V +PV E LP+ + +I RRD+ T LI F Sbjct: 241 CPKSFLETDWIRERIVSVPVRETLPRVSVGIISRRDALNTSACDYLIDCF 290 >UniRef50_Q3JHY3 LysR-family transcriptional regulator n=44 Tax=Burkholderia RepID=Q3JHY3_BURP1 Length = 338 Score = 157 bits (396), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 96/293 (32%), Positives = 152/293 (51%), Gaps = 1/293 (0%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 F +K HQ++AFV VA +GSIR A+R LN+S AL+K+++ELE L L R ++GV LT Sbjct: 37 FPMKYHQLKAFVAVADEGSIRAAARRLNVSPAALTKAVKELELALGVSLVVRTARGVQLT 96 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 G+ ASLI+ E++ A++DI Q QG G + + + + +++P F ++ P Sbjct: 97 RFGQQLQVRASLIVAEMQRARDDIEQAQGATTGAVAAAITPAAAVTILPDAFRAFRRRFP 156 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 +V I+EG + +L G LDF ++ EF +L + I R HP Sbjct: 157 LARVSIVEGFPGVALPKLHDGSLDFAVSVVVPELLAAEFEHAQLYASRHVIVARNAHPLA 216 Query: 183 GARSIKQLLDYSWTM-PTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 A S+ L+D W M P+P S + + P V C +++ SL+ SD + Sbjct: 217 AATSLADLVDADWLMNPSPESSTQLMFNCFAEHGLPAPTRVVECPSYAIAHSLIQGSDLI 276 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 + +PE++ + +LP+ E LP A+ ++ RRDS TP A L+ R Sbjct: 277 ASMPEQLLGVEWSRDRIAVLPIREALPAASVQVVTRRDSPLTPAAAMLVDCMR 329 >UniRef50_Q39P96 Transcriptional regulator, LysR family n=3 Tax=cellular organisms RepID=Q39P96_BURS3 Length = 311 Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 157/300 (52%), Gaps = 9/300 (3%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 A +K HQ++A++ + GSIRGA+R L++SQ A++K+I+ELE+ L A L R ++GVTL Sbjct: 13 AGDMKDHQLKAWLALVETGSIRGAARHLHLSQAAVTKAIRELEQDLEAPLISRSTRGVTL 72 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T+ G+ A L +L A++DIRQ G G +++ + + ++P VI RF ++ Sbjct: 73 TECGQQLTVRARLAQAQLTLARQDIRQILGGKHGHVSVAVTPMVFLGVLPGVIERFRKRM 132 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P K+ + EG + +++ LR G +DF + EF FE L + + CR GHP Sbjct: 133 PLAKLTVEEGMMPHVLHALRDGSIDFAVAAPADEEVKGEFHFEPLQVMETVVACRRGHPL 192 Query: 182 IGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT----PQVGVVCETFSACISLVAK 237 A QL+ +W M GS Q S LLD +T P V TF +L+ + Sbjct: 193 ETATEWHQLVGCTWVMNLSPGS---QHSNLLDHLRRTHHALPDSIVRVNTFGVGWNLMTR 249 Query: 238 SDFLSKLPEEM-GCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 SD L P EM +P Q +P+ LP +++ RD+ + +L+ FR++ Sbjct: 250 SDALLSCPAEMLAVEPYAAQA-CRIPLRMALPPLTLGILKLRDAPLSLAAETLVALFRQD 308 >UniRef50_A3DB82 Transcriptional regulator, LysR family n=4 Tax=Gammaproteobacteria RepID=A3DB82_SHEB5 Length = 306 Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 92/291 (31%), Positives = 148/291 (50%), Gaps = 3/291 (1%) Query: 6 KIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAG 65 K++Q+R + + G+I A++ML+ +Q L++SIQELE+ L L R LT AG Sbjct: 6 KLNQLRNLRAIIQHGNISAAAQMLHQTQSTLTRSIQELEKTLGVTLLDRGMNSTVLTKAG 65 Query: 66 ESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVK 125 F +LIL EL A +++RQ + G+I G + S++P VI +F ++H + Sbjct: 66 MMFEPRMNLILNELERAVDELRQIEKLSDGKIAFGCSHFPATSIVPDVIKKFQERHNSTR 125 Query: 126 VRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGAR 185 + I+EGQL +++ LR G+LDF I +EF E+L F++ R GHP + Sbjct: 126 ITIIEGQLSELLSSLRMGKLDFFIGVVSSDLMLNEFVEERLTSCSFSVVARKGHPLANST 185 Query: 186 SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACIS--LVAKSDFLSK 243 S+ +L W +P YY L ++ G V S+ I+ LV D+L Sbjct: 186 SLAELQAAKWYIPAASHGYYSDLETVIFPNG-VKSCGSVIFGDSSAIARKLVLNEDYLFV 244 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 P M P H + ++P+ + LP+ Y LI R+ + TP +L+ + R Sbjct: 245 GPRPMFLAPHHKDLISIIPIKDKLPEGHYSLISPRNKKLTPAALNLVNEIR 295 >UniRef50_B7RS97 Transcriptional regulator, LysR family n=1 Tax=Roseobacter sp. GAI101 RepID=B7RS97_9RHOB Length = 302 Score = 154 bits (388), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 89/292 (30%), Positives = 151/292 (51%), Gaps = 1/292 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K +Q+R FV VA GS+R ASR L ++QPA+++SIQELE L AQLF R ++GV LT Sbjct: 1 MKFNQLRDFVAVAEAGSLRAASRRLELAQPAITRSIQELENSLGAQLFIRGARGVRLTPV 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G F A +LEE+R A E++ Q QG G + +G+ + ++ V+ F +++P+V Sbjct: 61 GMVFLVRARNVLEEVRRAGEEVSQIQGSAEGNLVVGLSIAGHMGVLERVLRPFIRRYPRV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ ++EG L ++ +EL G +DF I + E KL + + + R HP + Sbjct: 121 RLHVIEGFLPTLESELLAGTVDFFIGPVSEDIVTPELDVSKLFDNERLVIARRDHPRSAS 180 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLVAKSDFLSK 243 RS+ L D W + +LS + + P++ C++ + ++ + +D L+ Sbjct: 181 RSLSDLNDVDWLTTSITHDAKDELSAVFAEHGLPPPRLIAKCQSALSILTFLMSTDMLAM 240 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 +P + PL L+ P+ E L+ R+ TP +T R+ Sbjct: 241 VPRQWVESPLMKDLLIPFPLKERFGAPPICLVHRKGLGLTPAAEHFVTLVRK 292 >UniRef50_D0ZGE3 DNA-binding transcriptional activator n=2 Tax=Edwardsiella RepID=D0ZGE3_EDWTE Length = 308 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 149/299 (49%), Gaps = 2/299 (0%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M + KI ++ F EV R GSIR A+R ++ SQPAL+++++ELE + A L R ++GVT Sbjct: 1 MRYLPKIQHLKVFNEVIRSGSIRAAARKMDQSQPALTRTLKELEHHMGATLLIRSNEGVT 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LTDAG+SF A LILEEL A E++ Q G + G+ + +++ V++ F Q Sbjct: 61 LTDAGKSFAIRAHLILEELEKAAEEVEQITKNGHGHVAFGISSLFGITVLNKVLNDFKQG 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P + + E QL +++ LR G LDF + T + +F L + F I R HP Sbjct: 121 FPATVINVKEAQLSTLLPSLRDGRLDFALGTLTEEMPLGDFISIPLFDAPFCIVARKEHP 180 Query: 181 AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLD-DQAQTPQVGVVCETFSACISLVAKSD 239 ++ L W MP YY + ++ D P ++ ++ ++LV D Sbjct: 181 LANCSELEALRQAKWVMPETDMGYYHNIRRIIPFDHPDNPHYPILTDSTVCIMNLVMNGD 240 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVS-EILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 +L+ L + G L LP+ + LP Y LI R T + +LI QFR C Sbjct: 241 YLTILSRARLREARFGGVLTALPIGLQFLPVGHYGLIYPRKRPLTQASQALIEQFRWHC 299 >UniRef50_C4ST67 Transcriptional regulator, LysR family n=2 Tax=Yersinia frederiksenii ATCC 33641 RepID=C4ST67_YERFR Length = 307 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 90/291 (30%), Positives = 140/291 (48%), Gaps = 3/291 (1%) Query: 6 KIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAG 65 KI+Q++ + + GSIR A++ L+ +QPA+++SIQELE+ L L R G LT G Sbjct: 6 KINQLKNLRAIIQYGSIRTAAQSLHQTQPAMTRSIQELEKILGVSLLVRGVHGAELTAMG 65 Query: 66 ESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVK 125 F +L+L EL A +++ Q + G + G + + +P VI F ++ + Sbjct: 66 RIFEPRMNLVLNELERAMDELEQIERSSEGLVTFGCSHLPALAFVPDVIKNFQTRYTTAR 125 Query: 126 VRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGAR 185 + + EGQL ++N LR G LDF I EF E L QFA+ R GHP + Sbjct: 126 ITVAEGQLSELLNSLRLGRLDFFIGLVSPEISLREFVDEHLAVAQFAVIARKGHPLANST 185 Query: 186 SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACIS--LVAKSDFLSK 243 S+ +L W +PT +Y + L+ + P V+ SA I+ L+ D+L Sbjct: 186 SLSELQGAKWYLPTARAGFYNDIGSLIFPYGKEPTSSVIFGN-SATIAEQLILNEDYLFV 244 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 P+ M + ++PV E +P Y LI RR TP+ + R Sbjct: 245 GPKVMATVSSLQDIISVIPVKEKMPDGHYSLIYRRQQSLTPMAKRFMDDIR 295 >UniRef50_Q12CP1 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q12CP1_POLSJ Length = 315 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 87/279 (31%), Positives = 141/279 (50%), Gaps = 5/279 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +I F+ V GSIRGA+R L +SQPAL++++Q+LEE L QL R +G +LT A Sbjct: 1 MRLQRIEQFIAVVDAGSIRGAARRLGVSQPALTRALQQLEEELGVQLMQRSVRGASLTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +F A + ELR ++ R+ G + +G+ S + L+P ++ QQ P Sbjct: 61 GSAFLARARVAEAELRMGADEARRSSDDGGGLVTVGVSPSAASLLLPEFVTALRQQRPNT 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++R++E ++ +R+ LD + + + D F L E Q + RPGHP A Sbjct: 121 RIRLLELSPGTLPPLVREAALDMAVAHHARSHLDAGLRFRPLFEIQMRVVVRPGHPLASA 180 Query: 185 RSIKQLLDYSW-TMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 RS+ +L+ +W +M P G +Q L + P V C + S + L+A SD + Sbjct: 181 RSLNELVQCAWLSMAAPGLPGDLIRQ--SFLAEGLPAPVPAVHCGSHSVALDLIAASDMV 238 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDS 280 LP + + LV LP+++ L L R DS Sbjct: 239 GLLPPALLRSCMAAGRLVELPMAKPLVPLDVGLYTRADS 277 >UniRef50_P94678 LysR type regulator of tsaMBCD n=1 Tax=Comamonas testosteroni RepID=P94678_COMTE Length = 298 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 89/287 (31%), Positives = 151/287 (52%), Gaps = 1/287 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K+ ++A + + GS+R A+++L++SQPALS +IQ+LE+ L A L R +GV+LT Sbjct: 1 MKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSF 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++F +HA LI+ E R AQE+I Q +G+ G I +I+ + +P ++ F ++ P V Sbjct: 61 GQAFMKHARLIVTESRRAQEEIGQLRGRWEGHITFAASPAIALAALPLALASFAREFPDV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 V + +G ++ +LR G LDF + ++ D + + L I + HP A Sbjct: 121 TVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDIDTDLEAQPLYVSDVVIVGQRQHPMANA 180 Query: 185 RSIKQLLDYSWTMPT-PHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSK 243 + +L + W + P G + P++G+VCE+F A +VA SD L+ Sbjct: 181 TRLAELQECRWAFSSAPRGPGAIIRNAFARYGLPEPKLGLVCESFLALPGVVAHSDLLTT 240 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLI 290 +P + L +P+ + LP Y+++R D TP A LI Sbjct: 241 MPRTLYERNAFKDQLCSIPLQDALPNPTIYVLRRHDLPVTPAAAGLI 287 >UniRef50_A4XNT0 Transcriptional regulator, LysR family n=2 Tax=Pseudomonas RepID=A4XNT0_PSEMY Length = 307 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 128/222 (57%), Gaps = 15/222 (6%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K+HQ+RA + + GSI+ ASR+L++SQPALSK I+ELE L L R ++G+T+T+ Sbjct: 1 MKLHQLRALLAICESGSIQEASRLLHISQPALSKGIKELEAELGVPLLVRSNRGITVTEY 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE + A LILEE+R A+E+I +G + G++ IG+ + ++R+ +++P+V Sbjct: 61 GERLVRRARLILEEVRRAREEIESLKGTMDGKLAIGVSPVTPGAQFITSLNRYRKRYPRV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V+I E + +I LR+G+LD + + F + +L + + R GHP GA Sbjct: 121 QVQIHELRPSKLIEGLREGQLDLVLTSLPASRCSDGFHWTELFSQPAVLAVRKGHPLGGA 180 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCE 226 RS+++LLD W LL D + +VGV+ E Sbjct: 181 RSLRELLDEEW---------------LLQDSLELSKVGVMFE 207 >UniRef50_D1UCJ8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UCJ8_9BURK Length = 325 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 81/276 (29%), Positives = 141/276 (51%), Gaps = 5/276 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +KIHQ+R + +A GS+RGA+RML+ S A++++IQ+LEE + QL R S GVTLT Sbjct: 10 MKIHQLRVLIAIADAGSVRGAARMLDSSPAAVTQNIQQLEETVRMQLVVRTSSGVTLTAC 69 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++ HA L+ ++ A + I +G+ +G+++I + A ++ + +P ++RF + P + Sbjct: 70 GQTLLAHARLVAAQMTRAHQAIDAMRGEPSGRLSIAVTAWVALTFLPETVARFRTRMPAI 129 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + EG L LR G LD + G +F ++ L A+ R GHP + Sbjct: 130 QLELFEGLLAIATPRLRDGSLDIYVGRQAPGVTTCDFNYQPLFATSRAVVARQGHPLADS 189 Query: 185 RSIKQLLDYSWTM---PTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 RS+ LL+ W + P G Q+ P+ + + ++L+ ++D L Sbjct: 190 RSLADLLENDWLVALDPQTEGQASYQM--FARHGLPVPRSIHFLHSLTVAVALLKRTDML 247 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQR 277 S P + GL +P+ E L + +I R Sbjct: 248 SIFPWPLVELCAARDGLCAIPLREELEDSTVGIIMR 283 >UniRef50_B2U625 HTH-type transcriptional regulator TdcA n=1 Tax=Escherichia coli 53638 RepID=B2U625_ECOLX Length = 309 Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 84/290 (28%), Positives = 148/290 (51%), Gaps = 4/290 (1%) Query: 6 KIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAG 65 K + F+EVAR G I AS+ LN++QP +++ I+ELE + LF R GV+L AG Sbjct: 11 KSKSLMVFLEVARSGGIMNASKKLNITQPTVTRIIRELENYVGTPLFERTCSGVSLNQAG 70 Query: 66 ESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVK 125 F+ + L+ + +IR+ G+ + ++G + + +++P VI+ F + + V Sbjct: 71 NVFHGRVLSYINGLQKSISEIRKEFGKDNKKFSLGYSSLVGYTVLPDVINEFRELNRDVS 130 Query: 126 VRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGAR 185 + I EGQL ++ L G LD I T +E++ E L + F++F P AR Sbjct: 131 ISIYEGQLSDLLPLLNTGRLDCAIGTLLNDELPYEYSAELLFKSSFSVFTSVLSPYSRAR 190 Query: 186 SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSKLP 245 ++++L + W +P YY L+E L + ++ S+ I+LV+ +D+++ L Sbjct: 191 NLQELQEAKWVLPVTCFGYYNNLTEFLRRAGVNIDNAIRTDSISSIINLVSCADYVTVLA 250 Query: 246 EEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 + MG L + + E LP A YYL + + P + L+++F R Sbjct: 251 KPMGDGRNKKLSLRPIRIKEQLPSADYYLTWSK--KYIP--SRLLSEFMR 296 >UniRef50_C1M9S9 DNA-binding transcriptional activator TdcA n=3 Tax=Citrobacter RepID=C1M9S9_9ENTR Length = 312 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 2/291 (0%) Query: 6 KIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAG 65 K + F EV R GSI A++ L ++QPA+SK I ++E +L R++ GVTLT AG Sbjct: 8 KTQHLVVFQEVIRSGSIGSAAKELGLTQPAVSKIINDVEAYFGIELVVRKNTGVTLTQAG 67 Query: 66 ESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVK 125 + + I E++ +++ ++ G + I+ ++M +I +F + P+ + Sbjct: 68 QVMLSWSESITREMKNMVDEMNSMTSNAVVDVSFGFPSLIAFTIMSGMIKKFKEVFPKAQ 127 Query: 126 VRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGAR 185 V + E QL S + +R G LDF I T H+ E L E F + G Sbjct: 128 VSMYEAQLSSFLPAIRDGRLDFAIGTLSDEMKLHDLHVEPLFESDFILVASKSRTCTGIT 187 Query: 186 SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSKLP 245 S+ L + W +P + YY +L L + + + V ++ +LV +DFL+ +P Sbjct: 188 SLSALKNEQWVLPQTNMGYYSELLTTLQNNGISSENIVKTDSVVTIYNLVLNADFLTVIP 247 Query: 246 EEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 +M P + +PV E LP A Y + ++ R AS++ + +E Sbjct: 248 CDM-TTPFGSNQFITIPVEETLPVARYAAVWSKNYR-IKKAASILVELAKE 296 >UniRef50_Q141G8 Transcriptional regulator, LysR family n=6 Tax=Burkholderia RepID=Q141G8_BURXL Length = 316 Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 82/292 (28%), Positives = 141/292 (48%), Gaps = 11/292 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K+HQ+ +A GSIR A+R L++S A++K+++ELE L A L R + GV T+ Sbjct: 1 MKLHQLSTLAAIADTGSIRAAARSLDLSPAAVTKAMRELEADLQAPLLVRSASGVAFTEF 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + HA ++L +L+ A +I +G AG++ +G+ ++ + +P + RF Q+ P+V Sbjct: 61 GRALVVHARVVLGQLQRAHAEIEALRGAAAGKLTVGVTPWVALTFLPPTVLRFRQRMPEV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ EG L + LR G LDF+I EF L A+ R HP G Sbjct: 121 QLEFFEGLLAVVQPRLRDGSLDFSIGRPPPASPQSEFHNVPLFSTHSAVVARRDHPKAGC 180 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQA------QTPQVGVVCETFSACISLVAKS 238 R++ +L D W + ++ E + D Q P + + + + L+A + Sbjct: 181 RTLLELEDAEWVL-----NWDPASRESISDNVFRKRGMQVPHTIHLAHSLAVVLGLLAHT 235 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLI 290 D LS P + L + L LP+ E + + + RR + +P A + Sbjct: 236 DMLSIFPWPLVEVTLAKEQLWALPLRETVDETIVSITSRRGAPTSPAAACFL 287 >UniRef50_B9Z0I5 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z0I5_9NEIS Length = 298 Score = 137 bits (345), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 80/298 (26%), Positives = 145/298 (48%), Gaps = 3/298 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K+ Q+ F+ V + S+R A+R L+++QPA+++++QELE L L R +G+ LT Sbjct: 1 MKLQQLEVFIAVTEEKSLRAAARRLDLTQPAVTRTVQELESDLGVVLMTRSVQGIELTSF 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + A +LE+ R A+E++ Q +G + G++ + ++I+ +L+P I RF + P+ Sbjct: 61 GAALRIRAQQLLEDARRAREEMDQLKGDMRGKVTVSATSTIALTLLPQAIDRFQEAAPEA 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ +E + LR G +DF ++ D + T L F + R HP A Sbjct: 121 ELTFLEVKFPQATQHLRDGSIDFLVSHVLPDMLDDDLTSIPLFTVDFVVMAREQHPLRNA 180 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQA--QTPQVGVVCETFSACISLVAKSDFLS 242 R + +L + W+ G + E L Q P+ + C +F+ + LV+ +D L Sbjct: 181 RRLAELAEAQWSTTVTSGGTQHSVMEALFQQEGLPLPRRLIQCSSFAIALGLVSGTDTLV 240 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 L + + GL +P+ + LP ++ R+D TP +T R L Sbjct: 241 -LFSRLLAQRIADLGLRQIPLEQPLPALEMSIVMRKDILLTPAAQHFVTCLRASAEVL 297 >UniRef50_A0AXF9 Transcriptional regulator, LysR family n=9 Tax=Burkholderia cepacia complex RepID=A0AXF9_BURCH Length = 329 Score = 137 bits (344), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 83/284 (29%), Positives = 144/284 (50%), Gaps = 5/284 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K+ Q+ AF+ VA +IRGA+R L ++QPA+S ++ELE L L R KG+ LTD Sbjct: 25 MKLKQLDAFLAVAEHRTIRGAARALGVTQPAVSGIVRELEHELGVPLVVRSVKGIALTDY 84 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +F A LI+EE++ +++I Q + G ++I + +++ +++P + F + P Sbjct: 85 GSAFAIRARLIVEEIQRTRDEIEQLRLGTTGSVSIAVSPTVALTILPRAFAAFTRDLPGA 144 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQG--PYDHEFTFEKLLEKQFAIFCRPGHPAI 182 + + + + + LR G LDF + P EF L FA+ R H Sbjct: 145 TLNVDDALTATDLARLRDGSLDFIVTHQLSNALPDPDEFASIPLFRTAFAVVARSRHRLA 204 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQL--SELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 ARS+++L+D W +P +G L S + P+ V C +F+A + LV+++D Sbjct: 205 RARSLRELVDAHWCVPR-YGEGGDDLIRSIFMPFGLDVPKRVVHCPSFAATLGLVSQTDA 263 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTP 284 L + +G+V L ++E +P ++ RR + TP Sbjct: 264 LGVFARPLAEVERQSRGIVALNLAEPMPALTVAIVMRRHALLTP 307 >UniRef50_A9AQ38 LysR family transcriptional regulator n=7 Tax=Proteobacteria RepID=A9AQ38_BURM1 Length = 317 Score = 136 bits (343), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 78/278 (28%), Positives = 144/278 (51%), Gaps = 2/278 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K+HQ++A V A GSIRGA+R L +SQ A++++++ELE L R +G+ T+ Sbjct: 1 MKLHQLQALVASAEAGSIRGAARTLGLSQAAVTRALRELEAAERLPLLVRAPEGIGFTEY 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++ HA L+L++L A +D+ + +G++ G+++IG+ ++ + + + RF ++ P V Sbjct: 61 GKALLTHAKLVLKQLEQAHDDLARMRGRVDGRLSIGVTPWLTLTFLAETVLRFRERMPDV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + E + LR G +DF + + G EF FE +L A+ R GHP A Sbjct: 121 RLELYEALMAVAQPLLRDGSMDFALGHIHPGSGAQEFAFEPMLRYDTAVMVRAGHPRERA 180 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQ-AQTPQVGVV-CETFSACISLVAKSDFLS 242 RSI LLD W + + + L A+ + +V ++ S +++ ++D + Sbjct: 181 RSIHDLLDDDWVLNSTADGQTALVDYLFTRHGARIDERRIVRAQSVSMLQTMLEQADMCT 240 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDS 280 P + P G+ + L + E ++ RR S Sbjct: 241 WCPTILAAVPSFGERMRALSLKETFEPRELGVVTRRSS 278 >UniRef50_D0IX04 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0IX04_COMTE Length = 309 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 86/277 (31%), Positives = 131/277 (47%), Gaps = 1/277 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + Q+R F+ V G R ASR L++SQ ++ S++ LE L QL R +GV LT Sbjct: 1 MTLQQLRVFLAVVEFGGFRAASRQLDISQAGITTSLKALEATLGVQLLRRSVQGVALTAE 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE A LI E A+ED RQ G + IG+G + + L+ V+ FH++ P V Sbjct: 61 GERLLPRAKLITREAYKAEEDARQALTAEGGSLAIGLGPTPTAVLLHLVVPEFHRRFPSV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++R+ G ++ EL+Q + + F +L + R GHP GA Sbjct: 121 QLRLFSGFYEQLLPELQQSRIQLAVTAVPDTGVAAGFEVRRLFRSALVVIARRGHPLAGA 180 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAKSDFLSK 243 +K L W + P G + +Q + P+V CE+FS L+ +D+L+ Sbjct: 181 CRLKALQGQEWVLLGPPGGPGGTVLRFHTEQGLSMPRVAATCESFSHLTPLLRGTDWLAM 240 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDS 280 +P M + L G +V LP+ E P LI R DS Sbjct: 241 VPIAMMDNNLLGNDVVALPIEEPPPTFDNCLIYRSDS 277 >UniRef50_P0ACQ8 HTH-type transcriptional regulator tdcA n=105 Tax=Enterobacteriaceae RepID=TDCA_ECO57 Length = 312 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 79/291 (27%), Positives = 139/291 (47%), Gaps = 2/291 (0%) Query: 6 KIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAG 65 K + F EV R GSI A++ L ++QPA+SK I ++E+ +L R++ GVTLT AG Sbjct: 8 KTQHLVVFQEVIRSGSIGSAAKELGLTQPAVSKIINDIEDYFGVELVVRKNTGVTLTPAG 67 Query: 66 ESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVK 125 + + I E++ +I + +++ G + I + M +I++F + P+ + Sbjct: 68 QLLLSRSESITREMKNMVNEISGMSSEAVVEVSFGFPSLIGFTFMSGMINKFKEVFPKAQ 127 Query: 126 VRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGAR 185 V + E QL S + +R G LDF I T + E L E +F + G Sbjct: 128 VSMYEAQLSSFLPAIRDGRLDFAIGTLSAEMKLQDLHVEPLFESEFVLVASKSRTCTGTT 187 Query: 186 SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSKLP 245 +++ L + W +P + YY +L L + + V ++ +LV +DFL+ +P Sbjct: 188 TLESLKNEQWVLPQTNMGYYSELLTTLQRNGISIENIVKTDSVVTIYNLVLNADFLTVIP 247 Query: 246 EEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 +M P + +PV E LP A Y + ++ R AS++ + +E Sbjct: 248 CDM-TSPFGSNQFITIPVEETLPVAQYAAVWSKNYR-IKKAASVLVELAKE 296 >UniRef50_UPI0001C33D15 DNA-binding transcriptional activator TdcA n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI0001C33D15 Length = 274 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 73/260 (28%), Positives = 128/260 (49%), Gaps = 1/260 (0%) Query: 36 LSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHASLILEELRAAQEDIRQRQGQLAG 95 ++K+I ++E +L R + G+ LTDAG++ H+ IL++L A D+R+ Sbjct: 1 MTKTIHDIENYFGVELIARNNTGIDLTDAGKTLLTHSRTILKDLTLAVNDMRRLLSDPIT 60 Query: 96 QINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQLVSMINELRQGELDFTINTYYQG 155 +++ G + I +++P ++ +F++ +P ++ + E QL S++ LR+G LDF I T Sbjct: 61 EVSFGFSSLIGFTVIPDIVKQFNKLYPTARITMQEAQLSSLLPALREGRLDFAIGTVTPD 120 Query: 156 PYDHEFTFEKLLEKQFAIFCRPGHPAIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQ 215 L +F+ GHP ++ L W +P YY+ LSELL+ Sbjct: 121 MPVQNLAVYPLFNAEFSFIAAQGHPLAACETLNALQHARWVLPQTDMGYYQALSELLEHN 180 Query: 216 AQTPQVGVVCETFSACISLVAKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLI 275 V ++ +LVA + F++ L M P G LPV E+LP+A Y L+ Sbjct: 181 VVNTDRVVRTDSVITIFNLVAHAGFITVLARAMSS-PFDGGQFAELPVREMLPQARYALV 239 Query: 276 QRRDSRQTPLTASLITQFRR 295 R+ RQ +L++ R+ Sbjct: 240 CSRNKRQGVGVEALLSIIRK 259 >UniRef50_B1Z3Z1 Transcriptional regulator, LysR family n=16 Tax=Proteobacteria RepID=B1Z3Z1_BURA4 Length = 320 Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 76/278 (27%), Positives = 144/278 (51%), Gaps = 2/278 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K+HQ++A V A GSIRGA+R L +SQ A++++++ELE L R +G+ T+ Sbjct: 4 IKLHQLQALVASAEAGSIRGAARTLGLSQAAVTRALRELEASERLPLLVRAPEGIGFTEY 63 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++ HA L+L++L AQ D+ + +G++ G++++G+ ++ + + + RF ++ P V Sbjct: 64 GKTLLTHAKLVLKQLEHAQSDLERMRGRVEGRLSVGVTPWLTMTFLAETVLRFRERMPDV 123 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + E + LR G +DF + G EF FE LL ++ R GHP A Sbjct: 124 RLELYEALMAVAQPLLRDGSMDFALGHVQPGSSAQEFAFEPLLRYDTSVMVRAGHPRERA 183 Query: 185 RSIKQLLDYSWTM-PTPHGSYYKQLSELLDDQAQTPQVGVV-CETFSACISLVAKSDFLS 242 +S+ LLD W + +P G AQ + +V ++ + +++ ++ + Sbjct: 184 KSVHDLLDCDWVLNSSPDGQAALVDYLFTRHGAQIDERRIVRAQSVAMLQTMLEQAGMCT 243 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDS 280 P + P G+ + +L + E + ++ RR S Sbjct: 244 WCPTILAAVPPFGERMRVLSLKETFEPSELGIVTRRSS 281 >UniRef50_D1TFB5 Transcriptional regulator-like protein n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TFB5_9BURK Length = 447 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 82/266 (30%), Positives = 128/266 (48%), Gaps = 1/266 (0%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M +K+HQ+ A V +A GS+R A+ +L ++ A++K++++L+E L L G+ Sbjct: 128 MRESIKLHQLVALVAIADTGSVRSAAAILGVTAQAVAKNLRQLQESLRMPLVLHTPAGIV 187 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LTD G QHA LI+ + A +DI +GQ G+++ G+ + + +P + RF Q Sbjct: 188 LTDGGRMLLQHARLIVGQTSRALDDIDTLRGQPRGRLSFGLPPWMVMAFLPDTMKRFEQT 247 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P V + +G LV + LR G +DF I EF F LL + R GHP Sbjct: 248 LPGVALETFDGYLVLGLPRLRDGSIDFLIGRPTPEDLGAEFNFRPLLVAGNGVVARQGHP 307 Query: 181 AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLVAKSD 239 A G S+ LLDY W + G + + +P+ + +A I L+ SD Sbjct: 308 AAGKHSLADLLDYGWLLSRDPGREAHLPANIFTRHGLPSPRALHYVHSLAAVIYLLQHSD 367 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSE 265 LS P + Q L ++PV E Sbjct: 368 RLSIFPWPLIELCSRRQNLCVIPVQE 393 >UniRef50_B1Z1E9 Transcriptional regulator, LysR family n=50 Tax=Burkholderia RepID=B1Z1E9_BURA4 Length = 306 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 86/307 (28%), Positives = 150/307 (48%), Gaps = 29/307 (9%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 + I Q++AFV A S+R A+R L ++QPA++ +I+ELE L A+L R +GV LT Sbjct: 7 HLNIAQLQAFVSAAHHKSLRAAARELGVTQPAITHTIRELETALNAELLVRSVRGVELTA 66 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 G + A +L ++R E + Q +G+++G++ +G SI+ + +P ++ F + P Sbjct: 67 CGHALLPRAEQLLGDMRRTVEAVEQVKGEMSGRVAVGTMPSIALTALPHAVTAFRRSMPN 126 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V + + E + + +LR G LD ++ D +FT LL +F + R GHP Sbjct: 127 VSLHLEEVTVPDALAQLRNGTLDIA-AMHHVPALDRDFTQVPLLSTEFTVVMREGHPLAH 185 Query: 184 ARSIKQLLDYSWTMPT-----PHGSYYKQLSELLDDQA--------QTPQVGVVCETFSA 230 AR ++++LD W + PH +S + D + ++P +F+ Sbjct: 186 ARRLEEMLDAEWIVTVGAEQLPHSV----MSAMFDARGLPLPKRLLRSPM------SFAV 235 Query: 231 CISLVAKSDFLSKL--PEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTAS 288 + LVA+SD + P PL G+ + E +P+ +I RRD TP + Sbjct: 236 TLGLVARSDVIGCFTRPLAAMVAPL---GIRTAELDESMPRFDLSIIARRDLLPTPAVSE 292 Query: 289 LITQFRR 295 + +R Sbjct: 293 FVGCLQR 299 >UniRef50_A3V8N8 LysR-family transcriptional regulator n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V8N8_9RHOB Length = 311 Score = 130 bits (326), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 77/303 (25%), Positives = 137/303 (45%), Gaps = 5/303 (1%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 + +K+ I+ V +A GS+RGA++ L SQPA+++++++ E+ L +F R S+GV Sbjct: 9 LLITMKVQHIQILVAIAEHGSLRGAAKALGKSQPAMTQALRQAEDDLGVSIFARTSRGVE 68 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT+ GE A I E+ E++ Q +G+ AG +++ + + +MP ++ F + Sbjct: 69 LTEVGERVLVRARTITSEINRLDEEVTQLRGEQAGAVHVCVSPLAAVRIMPRALTLFRKT 128 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 HP++ VR+ G + LR+G D I E E L++ + P Sbjct: 129 HPKIDVRLTSGLFPGALKPLREGRTDIVIGPAPPAGMLREIAIEHLVDTPIQVITAANSP 188 Query: 181 AIGARSIKQLLDYSWTM---PTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAK 237 + ARS+ L + W M PT G ++Q LD P E++ ++LV Sbjct: 189 LLSARSLGDLAEAQWIMIGAPTGPGDIFRQ--PFLDHGFAPPHATTTSESYFGALALVES 246 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 + P+ + D + +P+ E + L+ R TP +L RR Sbjct: 247 LGAVCTFPQLLLDDVQKTWRIAPIPIQETITPLKISLMTRAGHPLTPAADALANCIRRRA 306 Query: 298 GYL 300 + Sbjct: 307 SSI 309 >UniRef50_C4ZM05 Transcriptional regulator, LysR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZM05_THASP Length = 301 Score = 129 bits (325), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 81/275 (29%), Positives = 134/275 (48%), Gaps = 1/275 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K HQ++A V+VA GSIR A+R +N+SQ AL+K+++ELEE + A+L R KG+ T Sbjct: 1 MKDHQLKALVQVAESGSIRAAARAMNLSQSALTKALRELEEDVGAELLQRSYKGIGFTPE 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + A L+L + A+ +IRQ +G + + ++ +++PAV+S F + P Sbjct: 61 GSALLVRARLVLATIDKARAEIRQMRGGAGAHVKAAITPLLTATVLPAVLSAFRKAQPDA 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ EG LV + L +G++DF I +E FE L + R HP A Sbjct: 121 ELTFHEGLLVQALPGLIEGKIDFAIALASPQDLPYEIEFEPLADIDAVPMVRTTHPLAEA 180 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLVAKSDFLSK 243 R + D W + GS L L + + P + C + + +V ++D + Sbjct: 181 RDWNTVADAEWVLNLSAGSQSMNLVGWLRARGFRAPTRILHCSSPYLILDMVRRNDLIGY 240 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRR 278 P+ + D G GL L + + P L+ R Sbjct: 241 GPKVLVTDAQVGVGLRPLALQPLPPTMPLGLMTLR 275 >UniRef50_Q2G7Q5 Transcriptional regulator, LysR family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G7Q5_NOVAD Length = 318 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 87/294 (29%), Positives = 150/294 (51%), Gaps = 18/294 (6%) Query: 9 QIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESF 68 Q+RAF+ +A GS+ A+R++N++QP+LS+ +Q +EE L +LF R KG+ LTDAG Sbjct: 27 QLRAFIAIADTGSLGRAARVVNLTQPSLSRLVQGIEERLGHRLFDRGGKGMALTDAGRLL 86 Query: 69 YQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRI 128 HA ++ E++ ++++ +G G + IG A++ R+L+ + I + P + + Sbjct: 87 LPHARHLVAEMQNTRDELAALRGLRRGTVRIGAVAAVLRTLVASAIGSVLVETPDLAFEL 146 Query: 129 MEGQLVSMINELRQGELDFTINTYYQGPYDHEFTF---EKLLEKQFAIFCRPGHPAIGAR 185 +EG +++ L +D +++ P DH+ E FA+FC H Sbjct: 147 VEGVDGELLDALLTRRIDLAVSSQ---PLDHDEVVPIGECTYRDSFAVFCAASHTLPPRP 203 Query: 186 SIKQLLDYSWTMP----TPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 ++ Q + W MP TP G++ E++ + TP+V V C + A I++ A S+ L Sbjct: 204 TLAQAMTRGWVMPGHAFTPRGTF----EEIVRRHSLTPRVVVECGSVEAMIAVSASSELL 259 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 LPE + L + L ++E L +++ RR S P AS QF R Sbjct: 260 CWLPEPLLAPHLASGAMRKLDIAE-LALQRRFILHRRKSGLLPDAAS---QFVR 309 >UniRef50_A9BN68 Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BN68_DELAS Length = 342 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 82/247 (33%), Positives = 129/247 (52%), Gaps = 9/247 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K+HQ+R V VA GS+R ASR L ++Q A++++++ELEEG LF R+S G+ LT A Sbjct: 25 MKLHQMRYLVAVAGCGSVRAASRALGITQSAITQALRELEEGHRLALFERQSSGIVLTPA 84 Query: 65 GESFYQHASLILEELRAAQEDI-RQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 G + +HA LI ++ A++++ R R ++++G+ + +SL+P V+ F + PQ Sbjct: 85 GRTLLRHAQLITGQMAQAEDEMARLRDTCAVARLSVGVTPWVGQSLLPHVLRAFRAELPQ 144 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V++ + EG LR+G LD I GP + L + R GHP G Sbjct: 145 VRLELFEGLSAVAHPRLREGTLDLLIGRVPSGPSGGDLHGTPLFRYDATVVARTGHPLAG 204 Query: 184 ARSIKQLLDYSWTM---PTPHGSYYKQLSELLDDQAQTPQVGVVCETFSAC--ISLVAKS 238 ARS+ +L+D W + P ++L L P VG + SA + L+ S Sbjct: 205 ARSLAELMDCDWLLNYTPPEEDDLVRRL--FLRHGLPVP-VGHIHLVHSASLLLHLIVHS 261 Query: 239 DFLSKLP 245 D LS P Sbjct: 262 DMLSLCP 268 >UniRef50_Q1LC50 Transcriptional regulator, LysR family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LC50_RALME Length = 302 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 84/278 (30%), Positives = 139/278 (50%), Gaps = 9/278 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K+HQ+RA V+ GS++ ASR+L+++QPALSK+I+ELE + A LF R +KGV LT Sbjct: 1 MKLHQLRALAAVSETGSMQEASRLLHVTQPALSKAIKELEASVGAALFVRTNKGVQLTPY 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMP--AVISRFHQQHP 122 G+ HA LI E +R A++D+ +G + +I + + ++ L P A I+ F + P Sbjct: 61 GQRLVGHARLISENVRRARQDLEDMKGTVVSEITVAV-TPVTALLRPAGACITAFRRDFP 119 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 ++R+ E + M+ LR+G +DF + + H + I R HP Sbjct: 120 SAQLRVQEMRPAQMLEHLREGTIDFALTSQSLATA-HGLDCAQACHVPTLIAGRKDHPLR 178 Query: 183 GARSIKQLLDYSWTMPTP---HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 RS+ LL+ W + P G+ + QL + + P V C + + + + +SD Sbjct: 179 KTRSLGALLEAEWLVLDPLSDTGTPFHQL--FVINGMTLPSRVVECTSMTLALEMCRQSD 236 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQR 277 L L EE + + + V E +P L+ R Sbjct: 237 LLVLLSEESRRSRYLVETMDFIDVDETMPDRTIALVSR 274 >UniRef50_A4BGZ4 Transcriptional regulator, LysR family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BGZ4_9GAMM Length = 315 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 78/289 (26%), Positives = 146/289 (50%), Gaps = 12/289 (4%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K+ + FV GSI GA++ + SQP++SK ++ LEE L L R ++G+ +T+ Sbjct: 17 MKLDLLETFVVTINTGSIHGAAKEMGQSQPSISKKLKLLEESLGVPLLIRGTQGIEITNY 76 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++F A IL E R A+ ++ + +G+ + + + + + +LMP I + QQHP + Sbjct: 77 GKTFLIRAQAILNEARRAEAEMMELRGEKESTVRMIVAPTSTINLMPKTIQVYRQQHPHI 136 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 K+ I EG +++LR+ +DF + ++ +EF E++ A+ R G G Sbjct: 137 KLEIYEGLQAMAVDQLRRAHVDFAVCPLWEELPANEFMVEEIENMPMAVVTRKGSRFAGV 196 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELL-----DDQAQTPQVGVVCETFSACISLVAKSD 239 + L D +W H + LS L+ D P+ + + + +S +++ D Sbjct: 197 TKFRDLHDANWI----HIGAGENLSPLVLKIFSDLGLDAPKPMMESYSLTTTLSFLSEYD 252 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTAS 288 ++ +PE++ P++ L L + + Y+I+R R+TPLT S Sbjct: 253 SIALVPEKLVNHPVYSGWLTKLNLENDVDHYPLYIIRR---RETPLTPS 298 >UniRef50_Q13L80 Transcriptional regulator, LysR family n=6 Tax=Burkholderia RepID=Q13L80_BURXL Length = 316 Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 64/182 (35%), Positives = 103/182 (56%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +KIHQ+RA V +A GS+RGA+R+LN S A+++S+Q LEE + QL R S GVT+T + Sbjct: 1 MKIHQLRALVAIADAGSVRGAARLLNSSPAAVTQSLQYLEEAVRMQLVARTSSGVTMTAS 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++ HA LI+ ++ A + + +G G+++I + A ++ + +P +RF ++ P + Sbjct: 61 GQTLLAHARLIVAQMTRAHQAVDAMRGDPRGRLSIAVTAWVAMTFLPEAAARFRERMPDI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + EG L LR G LD + G EF + L AI R HP + Sbjct: 121 QLEVFEGLLAIANPRLRDGSLDIFVGRQSPGTAGCEFNYRPLFSSSLAIVARQDHPRADS 180 Query: 185 RS 186 RS Sbjct: 181 RS 182 >UniRef50_C4ZKY3 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=C4ZKY3_THASP Length = 296 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 85/292 (29%), Positives = 139/292 (47%), Gaps = 1/292 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K HQ+RA V+VA SIR A+R +++SQ AL+KS++ELEE + +L R KG+ T A Sbjct: 1 MKEHQLRALVQVAECSSIRAAARSMHLSQSALTKSLRELEEDVGEELMTRSYKGIEFTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G HA L L L A +IR +G ++ + + +P V+ + + P Sbjct: 61 GSMLLSHARLALSILDKAAREIRLLRGGAGARVVLAVTPMAGAVALPRVLREYEKLCPDA 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V + EG L ++ +L +G LDF I +E FE L + R GHP A Sbjct: 121 EVHLTEGLLSQVLPDLIEGRLDFAIAVADPAELPYEVIFEPLGPANAVLEGREGHPLAAA 180 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLVAKSDFLSK 243 + +L D + M GS + L ++ Q TP+ + C + + L+ ++D + Sbjct: 181 TTWAELRDAKFVMNLSPGSLGRALMSWMEQQGLPTPRHVIHCSSTLLMLELMQRTDCIGI 240 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 P + D G GL + V+ + P + L++ R + + T F R Sbjct: 241 GPGRLFDDKFVGYGLQRIDVTPMPPPMCFGLLRLRALPLSTAAKPMATLFSR 292 >UniRef50_C4ZIH4 Transcriptional regulator, LysR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZIH4_THASP Length = 318 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 86/279 (30%), Positives = 137/279 (49%), Gaps = 5/279 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +KI+Q+R F+ VA +GS+R A+ L +S A+S++++ELE + LF R S G L+ A Sbjct: 1 MKINQLRYFLAVADKGSVRAAATALGVSAAAVSQALRELETAMGTPLFTRESHGAVLSYA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G F HA LIL ++ A+ +I Q +G G + IG+ +++S++P ++RFH P V Sbjct: 61 GRQFLIHARLILGQVSRAEAEIAQIRGATGGSLTIGVTPWVAQSILPHALARFHALRPDV 120 Query: 125 KVRIMEGQLVSMINE-LRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 + + E V ++ LR G LD I F +L A+ R GHP Sbjct: 121 HLDVTEA--VGTVHPLLRDGTLDLVIAIPPPRQEASIFYTRELFRCDLAVVGRLGHPFAS 178 Query: 184 ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSA--CISLVAKSDFL 241 A S+++L+D W + + L LL P V SA IS++ + L Sbjct: 179 ATSLEELVDQDWVLTMLGAGQDEPLVNLLAPHGIAPPPHRVHYARSALVAISMLEVGNML 238 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDS 280 + P + PL + LP+ LP+ +I RR+ Sbjct: 239 TICPWPLLETPLLRGRVQALPIRNPLPEMHTAIIVRRND 277 >UniRef50_B2UBD9 Transcriptional regulator, LysR family n=8 Tax=Betaproteobacteria RepID=B2UBD9_RALPJ Length = 314 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 80/260 (30%), Positives = 131/260 (50%), Gaps = 8/260 (3%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 +++ + FV +A++ ++R A+ L++SQPA+SK++ ELE QL R +G LT Sbjct: 12 RIRFRHLSCFVAIAQERNLRRAAERLHLSQPAVSKTLGELEALAGVQLVERGRQGARLTA 71 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 AGE F +HA + + L +A + A +++G +++ SL+P I+ H Q P Sbjct: 72 AGEQFLRHAVGVTQALESAAAALMGSTDASAPVVHVGALPTVASSLLPRAIAHLHAQRPH 131 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI- 182 VR+ G V ++ L+ GELDF + + +FE L + A+ RPGHP + Sbjct: 132 AGVRLRTGTNVELLTALKAGELDFIVGRMAEPDRMQGLSFELLYAEPLALVVRPGHPLLS 191 Query: 183 ---GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACIS--LVAK 237 + S++ +LDY + TP G+ + +E L V ET S ++ L + Sbjct: 192 QPGASASLQAVLDYPLVIATP-GTVPRHHTEALFQTHGLRLPAGVTETLSVSVARLLACR 250 Query: 238 SDFLSKLPEEMGCDPL-HGQ 256 SD + PE D L HGQ Sbjct: 251 SDAVWITPERAAGDDLAHGQ 270 >UniRef50_Q46W38 Transcriptional regulator, LysR family n=4 Tax=Burkholderiaceae RepID=Q46W38_RALEJ Length = 316 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 94/296 (31%), Positives = 144/296 (48%), Gaps = 6/296 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K+ Q+R + VA GSI ASR L++SQPALSK+I ELE L L R +GV+LT Sbjct: 1 MKLQQLRILLAVAEHGSIHEASRSLHISQPALSKAIAELERELGVTLMSRSVRGVSLTAY 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + + AS++ +ELR A EDI +G ++NIG A S +P ++ F Q+ P V Sbjct: 61 GVALVKRASVVEQELRHALEDIESIRGHAEAELNIGFTAVASSGPLPDAMAAFRQRFPNV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +R E + + LR+G LD + + GP F +E L + R GHP A Sbjct: 121 ALRGFELRPQQIQEGLREGRLDLGLISTNSGPGSASFQWEPLFSVGMKLAVRTGHPLRRA 180 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLD-DQAQTPQVGVVCETFSACISLVAKSDFLSK 243 R ++ LLD W + P L+ L+ + + P+ V + + L K+D +S Sbjct: 181 RRLRPLLDADWLVLDPVDDAGSPLASLMRLHRLEMPKRVVQTASNLLGLQLATKTDLVSM 240 Query: 244 LPEEM-----GCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 + + G L L LP+ + LP +L+ R T + A + + R Sbjct: 241 WSDFVFFGTGGPLQLVRDALTPLPIQDELPDFRVFLVYRSMDLMTHVCAEFVREVR 296 >UniRef50_Q7WPE3 LysR-family transcriptional regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WPE3_BORBR Length = 304 Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 80/298 (26%), Positives = 146/298 (48%), Gaps = 18/298 (6%) Query: 16 VARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHASLI 75 V G R A+R L++SQ L+KSI LE+ L R +KGV LT G +F A I Sbjct: 3 VVSHGGFRAAARALDVSQGGLTKSIAALEQEYGVDLIERSAKGVLLTPKGAAFVPLARAI 62 Query: 76 LEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQLVS 135 +EE A+ +R + G+L+ +++G+ S L PAV+ F + P V + +G + Sbjct: 63 VEEAERAEGWLRAQSGELSTSVSLGVSIEPSIRLAPAVLRDFRKALPDTSVHLTQGVALD 122 Query: 136 MINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARSIKQLLDYSW 195 ++ LR+ ++ + + + ++L + + I R GHP GA S+++L+ Y W Sbjct: 123 LLGALRENRIELAVIRLPRNFDSSDLKVQRLYQSEPVIVGRAGHPGAGAASLRELVKYDW 182 Query: 196 TMPTPHGSYYKQ-------LSELLDDQA-QTPQVGVVCETFSACISLVAKSDFLSKLPEE 247 + G +Q + EL D + P+ VC + + ++++ +SD L+++P Sbjct: 183 VV---VGDTSRQGAMNDDSIWELFDREGLGRPRFAAVCNSLLSIVAMLMESDALARVPRA 239 Query: 248 MGCDPLHGQGLVMLPVSEILPKAAYYL-----IQRRDSRQTPLTASLITQFRRECGYL 300 + L + L+ +PV+E P Y++ RR S + ++++ + R G L Sbjct: 240 LLDHSLARRNLIPIPVAE--PPVPYWIATVHKASRRLSPEAQTLNAMLSSYARISGAL 295 >UniRef50_Q39PG2 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q39PG2_BURS3 Length = 315 Score = 123 bits (308), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 89/284 (31%), Positives = 140/284 (49%), Gaps = 21/284 (7%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K+HQ+RA V VAR GSI A+R L+++QPA+++S+++LE+ L L R S GVTLTDA Sbjct: 1 MKLHQLRALVAVARSGSIHEAARTLHLTQPAVTRSLRDLEDELGLMLVARSSSGVTLTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + + A L++ E+ +E++ Q + G++ IGM +++PA +RF + P V Sbjct: 61 GRAMLRRAELVVNEVARTEEEMAQLRENRQGRLAIGMTPLAGITVLPAAYNRFRRAMPDV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKL-----LEKQFAIFCRPGH 179 ++ +EG ++ +L+ G LDF + G +FT + FA+ R G Sbjct: 121 QLEFVEGSPSQLVEQLKNGALDFALGA---GADAQDFTSVRCEHLDSFPMWFAV-SRKGK 176 Query: 180 PAIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLVAKS 238 A GA S+ L D W P + L+EL P+ C + + +L S Sbjct: 177 LA-GATSLADLQDAEWLHTGPSTEFRAFLAELFAQAGLPAPRRVTRCASQTLFYALAVNS 235 Query: 239 DFLS-----KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQR 277 D ++ L E D L LV P P YL+ R Sbjct: 236 DVVTAWTQLALRGEDASDTLKTLDLVGQP-----PARNLYLLFR 274 >UniRef50_B1J1Q5 Transcriptional regulator, LysR family n=21 Tax=Proteobacteria RepID=B1J1Q5_PSEPW Length = 310 Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 72/232 (31%), Positives = 123/232 (53%), Gaps = 4/232 (1%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++K + F+E+ARQGS+ A+ +L +SQPA+SK+++ELE+ L +LF R +GV LT Sbjct: 6 RIKYRHLLCFLEIARQGSLARAADILAISQPAISKTLKELEDLLETRLFERSRQGVELTP 65 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 AG F +A ++ LR +R + + Q+ IG+ +++ LMP V+ R HQ+H Sbjct: 66 AGTRFMHYAGPSVQALRDGVSSLRG-EARAPSQVRIGVLSTVEGLLMPEVLCRLHQRHEA 124 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 + + ++ G ++ +LR GEL+ + P +FE L + A+ RPGHP + Sbjct: 125 LLISVVTGASAQLLGQLRLGELELVVGRMTDSPQIQGLSFEHLYSESMALVVRPGHPLLA 184 Query: 184 ARSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACIS 233 + ++ Y +P P G+ +Q ++ L Q ET S +S Sbjct: 185 NMQVDRARVGRYPLVLPPP-GTTIRQHADSLFVQCGIQLPAQRLETLSLALS 235 >UniRef50_C3KMF5 Transcriptional regulator, LysR family n=42 Tax=Bacteria RepID=C3KMF5_RHISN Length = 308 Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 88/300 (29%), Positives = 146/300 (48%), Gaps = 10/300 (3%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++K ++ FVEVARQ S+ A+ +LN++QPA++K+I+ELEE L +F R +G+ +T Sbjct: 5 RIKFRHLQTFVEVARQKSVVKAADLLNVTQPAVTKTIRELEEVLGVSVFERDGRGIKITR 64 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 GE F +HA L LR + + Q + I IG ++S +MP ++ F ++ Sbjct: 65 YGEVFLRHAGAALTALRQGLDSVSQERSGDGPPIRIGALPTVSTRIMPRAMALFLEEKTG 124 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI- 182 +++I+ G+ ++ +LR G+LD + F+FE L +Q R GHP + Sbjct: 125 ARIKIVTGENAVLLEQLRVGDLDLVVGRLAAPDRMTGFSFEHLYSEQVVFAVRAGHPLLS 184 Query: 183 GARSI-KQLLDYSWTMPTPHGSYYKQLSE---LLDDQAQTP-QVGVVCETFSACISLVAK 237 G +S+ L DY MPT S + E + + A P Q+ V ++F V Sbjct: 185 GKQSVFAHLGDYPVLMPT-RASIIRPFVERYLIANGIAGLPNQIETVSDSFGRA--FVRS 241 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 SD + + + + L LP+ K L R D+ + L S++ Q RE Sbjct: 242 SDAIWIISNGVVATDIEDGLLAALPIDTSETKGPVGLTMRTDAIPS-LPLSILMQTIREA 300 >UniRef50_P52686 SDS degradation transcriptional activation protein n=9 Tax=Proteobacteria RepID=SDSB_PSES9 Length = 306 Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 83/282 (29%), Positives = 136/282 (48%), Gaps = 3/282 (1%) Query: 6 KIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAG 65 + Q+R FV +A G A+ +N+SQPALS+SIQ LE GL +L R + V+LT G Sbjct: 3 DLRQLRHFVALAEHGHFARAAEAVNLSQPALSRSIQALENGLGCRLLDRGPRQVSLTAHG 62 Query: 66 ESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVK 125 +HA +L+ RA + + Q +G++ +G G L+P + RF HP V+ Sbjct: 63 RLVLEHARRLLDGDRALRSAVSQLDNLGSGELRLGAGPYPGARLVPRALGRFAGAHPGVR 122 Query: 126 VRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGAR 185 V++ S+ L L+ + + D + L IFCRPGHP +G R Sbjct: 123 VQLAIDTWYSLHQRLLDDALELFVADVRELRDDPQLEVTPLRSWPGVIFCRPGHPLLGRR 182 Query: 186 SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQ-VGVVCETFSACISLVAKSDFLSKL 244 + P ++++ L A++ Q +G+ C+ F A +LVA+SD LS Sbjct: 183 RHRLTAADLAAYPLAGTQVPAEVAQALGQLAESGQPLGIECDNFMALKALVAESDVLSMA 242 Query: 245 PEEMGCDPLHGQGLVMLPVSEIL--PKAAYYLIQRRDSRQTP 284 P ++ + + L +L ++ L ++AY L+ R +P Sbjct: 243 PLDVVAEEIEAGRLALLELAPGLLSQRSAYGLVSRAGRTLSP 284 >UniRef50_B5JN19 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JN19_9BACT Length = 296 Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 84/293 (28%), Positives = 145/293 (49%), Gaps = 6/293 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ QIR+F VA + R A+ LN++QPALS +++LEE L QLF R +GV LTDA Sbjct: 1 MELRQIRSFRVVAAEEHFRRAAEKLNIAQPALSLQVRQLEEELGTQLFERVGRGVRLTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G F+ +A I+ + + E R+ + G++ IG+ + + PAVIS F +++PQV Sbjct: 61 GSLFWDYADRIVSLVDESAEATREHSDLIRGRLRIGIAQTPNCCFGPAVISAFKRRYPQV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDH-EFTFEKLLEKQFAIFCRPGHPAIG 183 V + E + + L +GELD I GP D + E + E++F GHP Sbjct: 121 FVSLAELAADEIESSLLKGELDLGIGF---GPCDSPNLSSESIYEERFVALAPRGHPWFN 177 Query: 184 AR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 + S+K L + T + + DD + +V + T I+ + + Sbjct: 178 KKNISLKTLAQEELILLTRDYCTRRIFEKTCDDLDVSLKVAIEMNTIEGIIASLESTGLA 237 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 S LP ++ PL L +P+++ + L+ R+ +P ++ T+++ Sbjct: 238 SVLPAQIVNSPLMSPTLRSVPIAQPGIRRKVALVYRKSGYLSPAAHAMATEWK 290 >UniRef50_C4KR89 Transcriptional regulator, LysR family n=67 Tax=Proteobacteria RepID=C4KR89_BURPS Length = 338 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 79/253 (31%), Positives = 127/253 (50%), Gaps = 7/253 (2%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M F ++ Q+RAF +A GS+ A+ L+++QPALS+ ++ LEE + A LF R SKGV Sbjct: 35 MTFDLR--QLRAFTTIAASGSLGRAADALHVTQPALSRILKRLEEQIGAPLFERHSKGVQ 92 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT GE+ HA+L+ E A+E+I +G G I +G SI+ ++P + R + Sbjct: 93 LTAIGEALLPHATLLQHEAEHAREEIDALRGLAKGTIKVGAVGSIASLVLPVALGRVLDR 152 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P ++V I+EG +++ L E+D ++T + E + + P HP Sbjct: 153 WPNLRVVIVEGVWDRLVDALLTHEIDIALSTRVPDTDEVVAIAECRWDDVSHVVAAPDHP 212 Query: 181 A-IGARSIKQLLDY---SWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLV 235 AR+ L D W +P + ++Q+ D P + V + +A SLV Sbjct: 213 LRAAARAPLTLADTRAARWAIPPRGTAPFEQMRAAFDAHGLAPPDIAVETRSVTALKSLV 272 Query: 236 AKSDFLSKLPEEM 248 A + FLS + E M Sbjct: 273 AHAGFLSWMAEPM 285 >UniRef50_Q2KVE3 LysR-family transcriptional regulator n=1 Tax=Bordetella avium 197N RepID=Q2KVE3_BORA1 Length = 312 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 80/279 (28%), Positives = 135/279 (48%), Gaps = 3/279 (1%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 + + V + Q+ F VA +GS+R A+R L +SQP L+ S++ LE+G+ A LF R +KG + Sbjct: 10 IGWSVSLRQLELFRAVATRGSLRAAARHLGLSQPTLTHSMKVLEQGVGAPLFVRSAKGSS 69 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT G++ +H+ L L EL AQE+I + QG+ G++ +G +S + SL+P +SRF + Sbjct: 70 LTGIGQTLLRHSQLALNELHRAQEEIARLQGERGGRVAVGF-SSAATSLLPLALSRFQEA 128 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P V + + E G DF +++ E L + R GHP Sbjct: 129 CPGVTLALSELSSSEHDRGWLDGTYDFIVSSEVDEHPADAHPRELLYSLPLTVMARSGHP 188 Query: 181 AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 ARS+ +L D W +P + ++L E P+ V+C +L+ +D Sbjct: 189 LGKARSLAELQDALWVLPEYGPALLRRLFE--SAGLAPPRRYVMCLLSQIAFTLLRFTDA 246 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRD 279 L + + + L +P+ + +P + RD Sbjct: 247 LGMMAPKSLATLRNAHDLRPVPLRKPVPATLRVSLLARD 285 >UniRef50_A6UB72 Transcriptional regulator, LysR family n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UB72_SINMW Length = 326 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 74/243 (30%), Positives = 125/243 (51%), Gaps = 11/243 (4%) Query: 10 IRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFY 69 +R+F+ VAR+G++ A+ L +SQPAL++SI+ LE+ +LF R ++GVT T G++ Sbjct: 24 LRSFLMVAREGNVTAAAEKLGISQPALTRSIRRLEDETGFRLFDRHTRGVTPTIYGKALL 83 Query: 70 QHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIM 129 +HA LI E R A ++ + GQI IG G +L+P ++R H P+++V + Sbjct: 84 RHAQLIDTECRFASSELEALRSGHRGQIKIGGGPFWGAALLPRAVARLHSLLPKLQVNLQ 143 Query: 130 EGQLVSMINELRQGELDFTINTYYQGPYD-----HEFTFEKLLEKQFAIFCRPGHPAIGA 184 G + +L GELD ++ P D F F ++ + +F R GHP + Sbjct: 144 IGVNNVLHPKLLDGELDLVVSA---APRDLSQFPEHFRFTRITTIRSQMFVREGHPILAQ 200 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDD-QAQTPQVGVVCETFSACISLVAKSDFL 241 I+ L +Y W M ++++ LL D P++ + + A + L+ DFL Sbjct: 201 ERIRYEDLANYPWIMYQQDPEIIERVATLLKDLGVNPPRIAIKASSLMAVLELLRSGDFL 260 Query: 242 SKL 244 + L Sbjct: 261 ACL 263 >UniRef50_B2JPX7 Transcriptional regulator, LysR family n=14 Tax=Burkholderia RepID=B2JPX7_BURP8 Length = 310 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 123/243 (50%), Gaps = 5/243 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I Q+R F VA GSIR ASR L ++Q +++ +Q LE L A LF R ++G+ LT Sbjct: 3 LTISQLRVFTAVAEHGSIRAASRALGIAQSGVTQQLQNLEAMLGATLFTRTNRGIALTAL 62 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ Q A+ IL E A+ + +Q +G+ G++ GM V++ F ++ P V Sbjct: 63 GQRMLQRAATILGECARAEHEAQQLRGEYTGRVTFGMTTEPLIDAGAPVLTEFRERFPGV 122 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + G MI +R+G LDF + + + + KL + CR GHP A Sbjct: 123 DAHMRTGTSRMMIQRIREGTLDFAVALVSKHTDTTDLSVTKLYPSDPVVVCRRGHPKAHA 182 Query: 185 RSIKQLLDYSWTMP-TPHGSYYKQ---LSELLDD-QAQTPQVGVVCETFSACISLVAKSD 239 +S+ +L D W +P+ + Q L++L ++ + + P++ E + LV+++D Sbjct: 183 KSLAELADCMWIATRSPNLTDDPQAHRLNDLFENHRLEPPRIVSTVEGLFESLHLVSETD 242 Query: 240 FLS 242 LS Sbjct: 243 CLS 245 >UniRef50_Q0K3Z3 Transcriptional regulator, LysR-family n=1 Tax=Ralstonia eutropha H16 RepID=Q0K3Z3_RALEH Length = 297 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 86/287 (29%), Positives = 134/287 (46%), Gaps = 10/287 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++I Q+ V + ++ + LNM+QPALS+ + ELE L LF R S+G+ T Sbjct: 1 MRIRQLHVLVALHETRNVSRTAARLNMTQPALSRWLAELESELGVALFERHSRGLVPTRF 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 E+ HA IL E+ Q IR AGQ+ IG ++S L+P+ ISRF ++ P Sbjct: 61 CEALVVHARTILNEIERTQATIRVMAEGAAGQLAIGATPTVSVDLLPSAISRFRERFPDA 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTIN-TYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 + + EG + M+ LR+G LDF + T QG D E + L + + P HP Sbjct: 121 HLTLAEGTVEDMLPALREGRLDFVMGRTEVQG-IDGELRCDLLYPETIRVIAGPTHPLAR 179 Query: 184 ARSI--KQLLDYSWTMPTPHGSYYKQLS-ELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 R + Y+W P ++L EL P V + T A +SL+ + + Sbjct: 180 KRKVGWADTRAYTWVGPPVTSQIRRELDYELALAGEPAPCVRIESATLLANVSLLQQGEL 239 Query: 241 LSKLPEEMGC--DPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPL 285 L+ + M L ++ LP + +++RRD+ QTPL Sbjct: 240 LAVMSGRMAAFFSRLGQVAILRLPYRR---EGMVGVLRRRDTEQTPL 283 >UniRef50_A5V773 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=A5V773_SPHWW Length = 351 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 78/267 (29%), Positives = 131/267 (49%), Gaps = 11/267 (4%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++ + +R + + GS+ A+ L M+QPA++K++QE E L +LF R ++GV T Sbjct: 3 RLTMRHLRIVLAITDGGSLVAAAHTLCMTQPAITKALQETEALLQIELFSRTNRGVVPTP 62 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 AG + HA LI ++ A E+I + + G+I +G S S L+P I+ + P+ Sbjct: 63 AGLALAAHARLITAQIGHAAEEIHDLRDGMGGRIAVGTLLSASADLLPRAIAMLRRDRPK 122 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTF---EKLLEKQFAIFCRPGHP 180 + V I+EG ++ +LR G+LD + P HE E LL + RPGHP Sbjct: 123 LVVTIVEGTNDRLLPDLRLGKLDMVVGRL---PEYHELQGLHQEVLLTDVSCVIVRPGHP 179 Query: 181 AIGARSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACI--SLVA 236 +G ++ L + W +P + + + + D+ P V E+ S SLV Sbjct: 180 LVGRDPLRLADLAGWDWILPRLETTLRRHIDQAFRDEGVEPPPHAV-ESVSQLTNRSLVM 238 Query: 237 KSDFLSKLPEEMGCDPLHGQGLVMLPV 263 +D+L LP ++ LV+LP+ Sbjct: 239 DADYLGILPWQLAHREARAGHLVILPL 265 >UniRef50_Q5DZJ6 Predicted DNA-binding transcriptional regulator n=2 Tax=Vibrio fischeri RepID=Q5DZJ6_VIBF1 Length = 295 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 83/262 (31%), Positives = 133/262 (50%), Gaps = 14/262 (5%) Query: 11 RAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQ 70 R F EVARQGSI+GAS L +SQP L+ +I++LEE L LF R+SKGV LT +G +Y+ Sbjct: 6 RYFYEVARQGSIKGASEKLFISQPTLTTAIKKLEENLDVILFHRKSKGVELTSSGWLYYR 65 Query: 71 HASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIME 130 + + E+ + + + G+I +G+G + VI +F +QHP + I Sbjct: 66 YVQDLFEKHSQMMHQLTDMKARSQGKIKLGIGEAWWECFASEVIKQFVEQHPNNSMYIEF 125 Query: 131 GQLVSMINELRQGELDFTINTYYQG-PYDHEFTFEKLLEKQFAIFCRPGHPAIGARSIKQ 189 G +SM+N+L G++D I + H F L +Q A F R GHP + Sbjct: 126 GNGLSMLNQLLNGDIDLFIGHEIENIDPRHRVLFMPLFIEQEAWFVREGHPLLSNDLTSN 185 Query: 190 LLD-YSWTMPTPHGSYYKQLSELLDDQA------QTPQVGVVCE--TFSACISLVAKSDF 240 LD Y TP + + +++L+D+ + + GVV E + A I ++ SD Sbjct: 186 ELDNYPLIKVTPD---HIRHTKILNDEGMEAFNLKQQKTGVVYELNSLKASIDMLKTSDA 242 Query: 241 LSKLPEEMGCDPLHGQGLVMLP 262 + +++ + + G+V LP Sbjct: 243 IMPYTDQVK-EKMAELGIVTLP 263 >UniRef50_Q1R0T5 Transcriptional regulator, LysR family n=2 Tax=Chromohalobacter RepID=Q1R0T5_CHRSD Length = 310 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 80/267 (29%), Positives = 133/267 (49%), Gaps = 6/267 (2%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 ++ +VK+ + AF EVAR S+ A++ L+++QPA+SK+I+ELEE L A LF R +G T Sbjct: 2 LSARVKLRHLMAFQEVARLQSLAKAAQALSITQPAMSKTIRELEEMLDATLFERSPQGAT 61 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT AG++ +HA L L + +R Q + +G +++ L+P + R H++ Sbjct: 62 LTAAGQTLLRHAGPALRSLGEGFQAVRD-AAQHDTVVRMGALSTVEEGLLPLALHRLHRR 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P ++V ++ G +++ LR GELD + FE L + + R HP Sbjct: 121 APALRVHVVTGPSAYLLSRLRAGELDAVAGRMSEAREIRGLQFEHLYYEPLVLAVRVDHP 180 Query: 181 AIG--ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACIS--LVA 236 + AR ++L Y W +P + Q+ ++ TP + ET S +S Sbjct: 181 LLASKARVDEELGAYPWIVPPTSTTLRDQVERFWVERGGTPP-RIALETLSLPLSRRYAM 239 Query: 237 KSDFLSKLPEEMGCDPLHGQGLVMLPV 263 +SD + P + D +H L LPV Sbjct: 240 RSDAVWVAPLDAVRDDMHEGRLRRLPV 266 >UniRef50_C1A9Z7 LysR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9Z7_GEMAT Length = 296 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 75/247 (30%), Positives = 124/247 (50%), Gaps = 10/247 (4%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I +RAF+EVA G+ A+R + ++QP+LS IQ LE+ L LF R +GV LTD Sbjct: 1 MDITLLRAFLEVADAGAFSRAARRIGIAQPSLSLQIQRLEQQLGTTLFERHGRGVALTDV 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ Y A I++++RAA+E +R+ + G I +G +I+ ++PA + R +HP Sbjct: 61 GKGLYPRARRIVDDVRAAEEAVRREVAEGFGSITVGAIPTIAPYVLPAALERLQHRHPGA 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPG-HPA-- 181 +V + E +++ LR+G +D I PYD + +L + + P HPA Sbjct: 121 RVVLREDYSAVLVDLLREGAIDVAIAAL---PYDFGTLPQDVLGSEMLLVAVPALHPAAR 177 Query: 182 IGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCET--FSACISLVAKSD 239 G ++ QL D P +Q++ D + P VVC + + +V Sbjct: 178 AGKITVAQLQDAPTVTLDPVHCLGEQVAGFCDARQVNPS--VVCRSAQLTTVFEMVGAGM 235 Query: 240 FLSKLPE 246 LS +P+ Sbjct: 236 GLSIVPQ 242 >UniRef50_P77171 Uncharacterized HTH-type transcriptional regulator ydcI n=96 Tax=Enterobacteriaceae RepID=YDCI_ECOLI Length = 307 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/264 (29%), Positives = 138/264 (52%), Gaps = 6/264 (2%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++++ + FV VA+QG++ A+ LN+SQPALSK++ ELE+ A+LF R +G LT Sbjct: 10 RIRLRHLHTFVAVAQQGTLGRAAETLNLSQPALSKTLNELEQLTGARLFERGRQGAQLTL 69 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 GE F HA +L+ + A + +++G + +G + + ++P+VI +FHQQ + Sbjct: 70 PGEQFLTHAVRVLDAINTAGRSLHRKEGLNNDVVRVGALPTAALGILPSVIGQFHQQQKE 129 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 +++ ++ L+ GE+D I +E L + + RP HP + Sbjct: 130 TTLQVATMSNPMILAGLKTGEIDIGIGRMSDPELMTGLNYELLFLESLKLVVRPNHPLLQ 189 Query: 184 AR-SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVC-ETFSACIS--LVAKSD 239 ++ ++L++ + +P G+ +Q S+ L Q+Q ++ C ET SA +S L + D Sbjct: 190 ENVTLSRVLEWPVVV-SPEGTAPRQHSDAL-VQSQGCKIPSGCIETLSASLSRQLTVEYD 247 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPV 263 ++ +P D L LV LPV Sbjct: 248 YVWFVPSGAVKDDLRHATLVALPV 271 >UniRef50_B2T7R4 Transcriptional regulator, LysR family n=5 Tax=Burkholderia RepID=B2T7R4_BURPP Length = 325 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 81/301 (26%), Positives = 147/301 (48%), Gaps = 7/301 (2%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++K Q+ + +G++R A+ +L M+QPA S+ ++ELE+ L LF R G+ T Sbjct: 13 RLKTRQLLLLAAMEEEGNVRRAADVLGMTQPAASRLLKELEDMLEVSLFDRTPHGMHATL 72 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 GE +HA ++L L A ++I + LAGQ+ IG+ A+ + +++P I+ +++PQ Sbjct: 73 YGEVMIRHARMVLSNLSHAHDEISALRSGLAGQVRIGVIAAAAATMVPRAIASVKERYPQ 132 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYY--QGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 +++ M+ L +GELD I Q + E +E L ++ + RPGH Sbjct: 133 LQIWAEVETSDVMLPRLAEGELDIMIGRVLERQNQFKTEVRYEPLADEPLCVVARPGHHL 192 Query: 182 IG--ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQA--QTPQVGVVCETFSACISLVAK 237 +++ +++ SW + P GS + +L+ Q PQ V F A SL+ + Sbjct: 193 ENETGLTLRGIVNASWVLHPP-GSVLRHRFDLMFSQIGLNPPQNVVNTNNFLAISSLLLQ 251 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 SD L+ LP+E+ L +P+ + +I R+ +P + ++ R Sbjct: 252 SDMLAVLPDEVARQYQQYGVLKRIPIDLPCRMDTFGIITRQSHLLSPAASVVLEALREAA 311 Query: 298 G 298 G Sbjct: 312 G 312 >UniRef50_A6W282 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=A6W282_MARMS Length = 321 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 67/202 (33%), Positives = 111/202 (54%), Gaps = 3/202 (1%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++K ++ F+EV RQGS+ A+ +L ++QPA+SK ++ELE+ L +L R KGV LT Sbjct: 5 RIKYRHLQCFLEVTRQGSVVRAADVLALTQPAVSKKLKELEDILGVRLLERSKKGVELTP 64 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 G F +HAS + LR E I Q Q + +I+IG+ +++ S++P + RF Sbjct: 65 FGNVFLEHASTSVAALREGTERIVQAQQKGISRISIGVLPTVATSILPESVKRFRTGGID 124 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V++ ++ GQ ++++LR GELD + +F+ L +Q A RP HP + Sbjct: 125 VRLHLVSGQNALLMSQLRVGELDLVVGRLGVPEAMSGLSFQHLYSEQVAFTVRPNHPLLT 184 Query: 184 ARS--IKQLLDYSWTMPTPHGS 203 + I + +Y+ P P GS Sbjct: 185 KENFQISDIANYTVLYP-PKGS 205 >UniRef50_Q1QYT3 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QYT3_CHRSD Length = 317 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 82/300 (27%), Positives = 142/300 (47%), Gaps = 9/300 (3%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M ++K+ ++ F+ + ++ A+ L MSQPA SK + ELE L LF R +G+T Sbjct: 10 MRVRLKLRHLQLFIALDDLRNLHRAAERLGMSQPAASKLLGELEGQLGLALFERHPRGIT 69 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 GE+ +HA IL L A +++ Q AG +++G + + +L+ + + R H+ Sbjct: 70 PNWYGETVIRHARGILSSLHQAGDELNALQAGSAGSVSVGTVMAPAVTLLTSAVERVHRD 129 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P +KV I +I L +GE DF I +F FE++ E+ CR GHP Sbjct: 130 RPNLKVSIDVDVSHELIPRLVEGEFDFAIARIPSTLPAGDFVFEEIGEEALCFVCRAGHP 189 Query: 181 AIGARS--IKQLLDYSWTMPTPHGSYYKQLSEL-LDDQAQTPQVGVVCETFSACISLVAK 237 S ++ +++Y W + P +++ L L P+ + +++V K Sbjct: 190 LADRTSLNLEAMVEYPWVLQPPGALMRQRVDHLFLHHGVALPRQIIDTPDILVALAMVDK 249 Query: 238 SDFL---SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 SD + ++ E+ CD +LP E L Y L+ R+ R +P A+L++ R Sbjct: 250 SDTVTVTTRQVAELLCD---QPRFRILPFPEALSVQPYGLVSLREQRLSPGAAALMSALR 306 >UniRef50_Q2CED4 Transcriptional regulator n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CED4_9RHOB Length = 311 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 80/292 (27%), Positives = 147/292 (50%), Gaps = 12/292 (4%) Query: 9 QIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESF 68 Q+R E+AR G +R A+ + M+ PA S+ + ++E LA LF R KG++ T AGE Sbjct: 12 QLRLLTEIARHGKLRLAADVCGMTTPAASRMLADMETQLATHLFERTPKGMSPTPAGEVL 71 Query: 69 YQHASLILEELRAAQEDIRQRQGQLAGQINIG--MGASISRSLMPAVISRFHQQHPQVKV 126 HA ++ ++ +D G G + +G G ++S +++PA+++ ++ PQV V Sbjct: 72 VTHARKLVHDIDRMAQDFGAHLGGTGGSVRVGAVTGGALS-AVIPAILA-LKEEAPQVDV 129 Query: 127 RIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI--GA 184 + ++ L +GE DFT++ QG Y EF + + + R GHP G Sbjct: 130 SLDVSSSSQLMWGLERGEYDFTLSRVGQGDYSREFEIQPARGESVLLMVRRGHPLARSGP 189 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELL--DDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++ +L D WTM + G+ + E+ ++ A P+ + + A ++L+ +SD ++ Sbjct: 190 VALGELRDAFWTMQS-RGAPLRHAMEIAFHNEGADMPENVLETASVVAIMALLRESDIIA 248 Query: 243 KLPEEMG---CDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLIT 291 + EE+ +P + LV+L +P Y+++ RD +P L+T Sbjct: 249 IVTEEVAELLLNPPYEADLVLLETKRPIPIEPYHILLPRDRLMSPAAERLLT 300 >UniRef50_P0A4T6 HTH-type transcriptional regulator pcaQ n=10 Tax=Alphaproteobacteria RepID=PCAQ_AGRT5 Length = 311 Score = 113 bits (282), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 83/298 (27%), Positives = 139/298 (46%), Gaps = 6/298 (2%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++K ++ FVEVARQ S+ A+ +L++SQPA++K+I+ELE+ L L R +G+ ++ Sbjct: 5 RIKFRHLQTFVEVARQKSVIRAAEILHVSQPAVTKTIRELEDVLGVSLLEREGRGIRISR 64 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 GE F +HA + LR A + + Q + + +G ++S +MP +S F + Sbjct: 65 YGEVFLRHAGATMTALRQAVDSVSQEAARAGPPVRVGALPTVSVRIMPKAMSGFLAEKTG 124 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI- 182 V+I+ G+ ++ +LR G+LD + F+FE L ++ R GHP + Sbjct: 125 SPVKIVTGENAVLLEQLRVGDLDLVVGRLAAPQKMAGFSFEHLYSEKVRFVVRAGHPLLS 184 Query: 183 -GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACI--SLVAKSD 239 G L +Y MPT + + L P + + ET S + + SD Sbjct: 185 PGLSVFDHLHEYPVLMPTRQSVIGPVVEQFLIANG-VPALPIRIETVSDAFGRAFLRTSD 243 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 + + E + + L +LPV L R D+ Q L SL+ Q RE Sbjct: 244 AIWIISEGVVAADVADGILAILPVETGDTSGPVGLTVRADT-QPSLPLSLLMQAIREA 300 >UniRef50_Q46NY0 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46NY0_RALEJ Length = 303 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 75/241 (31%), Positives = 115/241 (47%), Gaps = 1/241 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K H +RA V +A GSI A+R L ++QPA++K+++ELE L R S GVTLT+ Sbjct: 1 MKHHHLRALVAIADHGSINAAARALCLTQPAITKAMRELETEAGVPLLARNSWGVTLTND 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++ A LI+ E+ A+ ++ QR+G ++ IG+ SL+P SRF + P V Sbjct: 61 GQALLARARLIVCEIERAEAELAQRRGINESRLRIGVSPLPGISLLPPAFSRFRRVMPDV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 V +E + LR G++DF + D + +L + R G P GA Sbjct: 121 SVDFLEFDPPRLQEHLRNGQVDFGLTATQVLAADPFLEYSELSVYPTSFVVRAGSPLAGA 180 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACIS-LVAKSDFLSK 243 S+ L D W SY L+ L P V T + S L+ ++D + Sbjct: 181 TSLADLQDAEWLHQDASNSYPVYLAGLFGRHGLPPPRRVTRSTSNVLFSTLMLETDAVVP 240 Query: 244 L 244 L Sbjct: 241 L 241 >UniRef50_D1XD01 Transcriptional regulator, LysR family n=1 Tax=Streptomyces sp. ACTE RepID=D1XD01_9ACTO Length = 337 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 74/271 (27%), Positives = 128/271 (47%), Gaps = 17/271 (6%) Query: 16 VARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHASLI 75 ++RQG++ GA+ L+++QPA ++S+ ELE+ L LF RR +GVT T GE+F QHA + Sbjct: 22 LSRQGTVVGAAAELHVTQPAATRSLHELEDILGVPLFERRPRGVTATIFGEAFTQHARAV 81 Query: 76 LEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQLVS 135 L +L A + + G + +G + S L+P I+ ++ P + V + E + Sbjct: 82 LAQLTQAGRHVTELADADRGTVVVGTHLAGSNVLLPRAIAGIKRKRPYLTVVVREASPEA 141 Query: 136 MINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARSIK--QLLDY 193 ++ EL G +DF + P D KL ++ + R GHP +G + ++ +L+D Sbjct: 142 LLLELEAGRVDFVVG-RLTAPSDERMVRRKLYDESVELVVRAGHPLVGQQHVELAELVDL 200 Query: 194 SWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLVAKSDFLSKLPE------ 246 W +P +++ E P V +F L+ ++D ++ LP Sbjct: 201 PWILPGAATVLRREIEEFFSRHGLALPPNRVETTSFLTVRQLLLETDVVAVLPSLIIRDD 260 Query: 247 ------EMGCDPL-HGQGLVMLPVSEILPKA 270 + DP+ H GL M + P A Sbjct: 261 TRLVGLRVPLDPIGHSVGLTMSAARTLSPSA 291 >UniRef50_Q1GJ71 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GJ71_SILST Length = 312 Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 80/287 (27%), Positives = 133/287 (46%), Gaps = 4/287 (1%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 A QVKI ++ +EV GS++GA+ L ++QPA+S++++ELE+ L + L R GV L Sbjct: 7 ARQVKIRHMQCLLEVVSCGSLKGAAERLYLTQPAISRTLKELEDILGSTLLLRSRAGVEL 66 Query: 62 TDAGESFYQHASLILEELRAAQEDI-RQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 T+AGE F A + L L E + R R G L + IG S++ L+P V F + Sbjct: 67 TEAGEVFAHFARMSLAALDHGLESLERTRGGALQQTVTIGALPSVAAGLLPRVAEGFQRL 126 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P + + +G ++I+ LR G + I +F ++ ++ RPGHP Sbjct: 127 APGAVLHLSDGPHGALIDLLRGGAVSMVIGRLGDPASMQGVSFTQVYTEEVVCVVRPGHP 186 Query: 181 AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLV--AKS 238 + A + L + P + Q+ L + + ET S + V + Sbjct: 187 CLAAPELDDLSRWPVIFPPVSAAIRPQVERWLISHGLSEPPNRI-ETVSGAFARVHARDT 245 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPL 285 D + + + + L L+ LP L K L+QR+D+ +PL Sbjct: 246 DAIWMISHGVVRNELSDGRLIRLPFDTSLTKGPVGLMQRQDADPSPL 292 >UniRef50_Q2G4H1 Transcriptional regulator, LysR family n=4 Tax=Sphingomonadaceae RepID=Q2G4H1_NOVAD Length = 383 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 80/265 (30%), Positives = 128/265 (48%), Gaps = 10/265 (3%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 +V Q+RAF+ +AR GS A+ +S +L +++ +L L +L RR + V LT Sbjct: 84 RVTGTQVRAFLALARAGSYAVAAEATGLSSASLHRAVADLSVALGQRLVDRRGRSVMLTP 143 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRS-LMPAVISRFHQQHP 122 AGE + L + ELR+ ++ QG+ AG++ +G +SR+ +PA I RF P Sbjct: 144 AGERRARGFGLAMAELRSGLAEVAAWQGKAAGRVVVG-AMPLSRARWLPATILRFAAAFP 202 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 V V ++EG + LR GE+D + + E + E Q A+ R GHP + Sbjct: 203 GVDVAVVEGSHAELSGPLRDGEVDLMLGALRDASSLDDLRQEAVFEDQPALVMRSGHPLL 262 Query: 183 -GARSIKQLLDYSWTMP---TPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 GA L + W +P TP Y++ + + A+ P VG+ C + L+ S Sbjct: 263 TGAVDGAALARFPWILPASDTPLRHYWEGM--MRSAGAEPPHVGIECGSVLTVRQLLLGS 320 Query: 239 DFLSKL-PEEMGCDPLHGQGLVMLP 262 D L+ L P ++ + L L LP Sbjct: 321 DALTLLSPAQLAVE-LDAGVLATLP 344 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 34/59 (57%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 + I I AF R GS+ A+R +N++QPAL+++I LE L LF R G+ T+ Sbjct: 6 INIRHIAAFAATVRHGSVTRAARAVNLTQPALTQAIARLEADLGCALFERGPAGMAPTE 64 >UniRef50_Q11H84 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11H84_MESSB Length = 314 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 69/260 (26%), Positives = 125/260 (48%), Gaps = 3/260 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + Q+ + V R GSI A++ LN +QP L++SI+ LE+ L L R + GVT ++ Sbjct: 6 IPVAQLLELLAVVRCGSINRAAQELNTTQPTLTRSIKRLEDRLRVPLLQRTAHGVTPSEY 65 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 ++ I + R A +I G AG+I IG A ++ ++P V++RF + P + Sbjct: 66 TKAMLPFLQSIESDFRKALAEIEAATGAGAGKICIGSTAMVANKIVPQVLARFVPRWPHL 125 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP--AI 182 + +E + +++ LR G+ DF + + ++L + RPGHP + Sbjct: 126 TIEFVEDRKPALLEGLRSGKYDFVMALMSPEEQARDILQQELFTDTLVVIARPGHPLTKL 185 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQ-TPQVGVVCETFSACISLVAKSDFL 241 + S++ ++ W +PT +L ++ P V F+A ++LV +D + Sbjct: 186 SSLSVRDIVQCKWILPTEGLDLRSRLENFFRNEGHDVPAFPVETTLFTAIVALVKSTDRI 245 Query: 242 SKLPEEMGCDPLHGQGLVML 261 S +P + D L LV L Sbjct: 246 SAIPSVVVRDELLSGELVAL 265 >UniRef50_B8KBX3 Transcriptional regulator, LysR family n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8KBX3_VIBPA Length = 298 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 84/271 (30%), Positives = 138/271 (50%), Gaps = 22/271 (8%) Query: 9 QIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESF 68 Q R F EVARQGSI+ A+ L +SQP+L+ +I++LE+ L A LF RRSKGV LT+ G + Sbjct: 4 QYRYFYEVARQGSIKAAADKLFISQPSLTTAIKKLEQQLGADLFIRRSKGVELTEYGWVY 63 Query: 69 YQHASLILE---ELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVK 125 +++ + E ++ D+R R G G++ +G+G + + F QQ+P Sbjct: 64 FRYVQEVQEKHNQMIHQLADMRMRSG---GKVKLGVGEAWWNCFAADAMQVFCQQYPASS 120 Query: 126 VRIMEGQLVSMINELRQGELDFTINTYYQGPYD-HEFTFEKLLEKQFAIFCRPGHPAIGA 184 + I G +SM++ L ++D + G + F L ++ A + RP HP + Sbjct: 121 MHIEFGNGLSMLHHLVNDDIDLFVGHEINGINSRYRVRFIPLFQEHEAWYVRPDHPLLEV 180 Query: 185 RSIKQ-LLDYSWTMPTP----HGSYY-KQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 + +++ Y TP HG ++ +EL AQ +V ++ SA I +V S Sbjct: 181 KEVEEHAHHYPLLKVTPDHARHGDVLTEEGAELFTVAAQETRVIYEMDSLSASIDMVKMS 240 Query: 239 D----FLSKLPEEMGCDPLHGQGLVMLPVSE 265 D + SK+ EE+ QGLV L +++ Sbjct: 241 DAIMPYTSKIAEELA-----EQGLVQLWLNK 266 >UniRef50_D2AWV2 LysR family transcriptional regulator n=3 Tax=Actinomycetales RepID=D2AWV2_STRRD Length = 295 Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 69/235 (29%), Positives = 116/235 (49%), Gaps = 5/235 (2%) Query: 6 KIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAG 65 I +R VAR GS GA+ LN +Q A+S+ I LE+ LF R ++GV LT AG Sbjct: 3 DIEALRLLDAVARAGSFTGAAARLNYTQSAVSRRIASLEQQAGGPLFDRLARGVRLTPAG 62 Query: 66 ESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVK 125 E+ +QHA ++L L A +++ G +G++ +G A+ + +L+P + F ++ P+V Sbjct: 63 ETLHQHARVVLNRLARAADELAGIHGGYSGRLRVGAFATANVALVPGALRAFRREFPEVG 122 Query: 126 VRIMEGQLVSMINELRQGELDFTINTYYQG--PYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 + +EG ++ +R+GELD + + Y PYD E L+E + + H G Sbjct: 123 LAPVEGPSGGLLRRMREGELDVAVVSDYPSGLPYDDEVEIIPLVEDELLVALPGDHRLAG 182 Query: 184 ARSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVA 236 S+ ++L + +W P G + L E P+ V ++ VA Sbjct: 183 RESVDLRELREETWIEAPPPGRTTR-LEEACARAGFAPRATVRIAEWTGKFGFVA 236 >UniRef50_B8CQS4 Transcriptional regulator, LysR family n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CQS4_SHEPW Length = 304 Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 80/297 (26%), Positives = 148/297 (49%), Gaps = 11/297 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ I+ FV +A+ S A+ L++SQP+L++SIQ++E+ L +LF R S+ V+LT Sbjct: 1 MELRHIKHFVALAQSKSYSVAASKLDISQPSLTRSIQKMEQSLGVKLFIRDSRRVSLTYH 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ +H+ IL + + DI+ G+ G++ IG G S +++ ++ F + HP V Sbjct: 61 GDLVLKHSDKILNTVCNLEADIKINSGRSNGKLTIGGGTLASSNILNDILHNFSKLHPNV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTY-YQGPYDHE----FTFEKLLEKQFAIFCRPGH 179 V + + + + L +GE+D I+ G + E +++K + FCRPGH Sbjct: 121 SVELRTRDIDELCSLLSKGEIDLFISEIKISGLSEREELQVISYKK---SRGVFFCRPGH 177 Query: 180 PAIGARSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVV-CETFSACISLVA 236 P + + + +L D+ ++P S + L L D ++ G+ E F + + Sbjct: 178 PLLNDKYLYTPRLKDFPISLPRATTSDIESLFGDLFDVNRSAFSGLFKFEYFHSVSKTIV 237 Query: 237 KSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 +SD + +PE + + L LV+L V ++ Y + SR T L +F Sbjct: 238 ESDMIGLIPEIVIANELASGELVLLDVLDMPEIKVDYGVVFHKSRVPDGTNKLFLEF 294 >UniRef50_Q1DBZ6 Transcriptional regulator, LysR family n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DBZ6_MYXXD Length = 311 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 77/272 (28%), Positives = 132/272 (48%), Gaps = 7/272 (2%) Query: 9 QIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESF 68 Q+RAF+EVAR G + A+R L +SQ LS+ +Q LE L +L R G LTDAGE F Sbjct: 5 QLRAFLEVARAGRLATAARGLGLSQSGLSRQLQSLEAALGTRLLVRTPGGTVLTDAGERF 64 Query: 69 YQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRI 128 HA L+ L A ++ + G G +++G ++ L+P +I F +Q P+V+ R+ Sbjct: 65 LPHAQRALDALTAGTSELERLSGTPHGVVSLGTLHTVGAYLLPDIIPAFARQFPEVRPRL 124 Query: 129 MEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGAR--- 185 EG +M + +G LD I + D ++L E+ + GH + Sbjct: 125 SEGLAPAMEEGVARGALDLAILSLPVRRAD--LVAQRLWEESLVLAVPRGHRLTKSGKPV 182 Query: 186 SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSKLP 245 ++ + ++ W + P S + + + + TP++ V + A +V + ++ +P Sbjct: 183 TMDEAVEEPWVV-IPGMSGTRAMEAACEARGVTPRLAVETDNAEAMRRMVERGLGVAMVP 241 Query: 246 EEMGCDPLHGQGLVMLPVSEILPKAAYYLIQR 277 + M D H QG ++P++ K LI R Sbjct: 242 QLMARD-HHAQGFDVVPLARAGVKRQVALIHR 272 >UniRef50_A7IF06 Transcriptional regulator, LysR family n=5 Tax=Alphaproteobacteria RepID=A7IF06_XANP2 Length = 325 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 64/224 (28%), Positives = 124/224 (55%), Gaps = 15/224 (6%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + Q+R FV + GS A+ L ++QPALS+ ++ +E L +L FR +GV T+A Sbjct: 1 MDLRQLRYFVSIVEVGSFSKAAHRLRVAQPALSQHVRNMEIDLGVELLFRSPQGVRATEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+ +HA LIL ++ A+E +R+ Q + G++ G+ ++S+ L ++S +++P++ Sbjct: 61 GETLVRHARLILSQMEVAREAVRRGQSEPEGEVRFGLPGTVSQMLCVPLLSEARRRYPKI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFC------RPG 178 K+R+ E +++ LR+G++D + Y+ D ++L ++ + RP Sbjct: 121 KLRVAEAMSGFVLDWLREGKIDLGV--LYRSVADRTLLARRVLSEELCLLGPAEPMDRP- 177 Query: 179 HPAIGARSIKQLLDYSWTMPT-PHGSYYKQLSELLDDQAQTPQV 221 HP GA S + D + +P+ HG L +L++++A + V Sbjct: 178 HPPPGAVSFADIADLTLILPSLGHG-----LRDLIEERALSENV 216 >UniRef50_Q0K1W4 Transcriptional regulator (Transcriptional regulator, lysr-family) n=3 Tax=Burkholderiaceae RepID=Q0K1W4_RALEH Length = 329 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 73/294 (24%), Positives = 139/294 (47%), Gaps = 3/294 (1%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++ + +R + +A S+R A+ + +SQPA++K++ ELE + LF R ++G+ T Sbjct: 17 RLHMRHLRLALALAEHRSLRRAAAQMALSQPAVTKALHELESVVGTLLFTRHARGIEPTV 76 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 GE+ ++A ++L +L A ++ G++ +G + S++ VI+ ++P+ Sbjct: 77 FGEALIRYARVVLADLDALHDEFAAIAAGEVGKVRLGSILAPVPSVLSGVINALKARYPR 136 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 + + + ++ LRQ LD I +G + FE L E+ AI R GHP G Sbjct: 137 LHIVMQVDTSDVLVQALRQDALDVVIGRIPEGTVADDLDFEPLFEESLAIVARAGHPQAG 196 Query: 184 ARSIK--QLLDYSWTMPTPHGSYYKQLSELL-DDQAQTPQVGVVCETFSACISLVAKSDF 240 R +K L Y W +P ++ + + D++ P+ + + + L+A SD Sbjct: 197 KRGVKLASLAGYPWIIPPAAVPMWQIIDQTFRDNRVPLPEDIIETSSIMGTLPLLADSDR 256 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 ++ +P + + L +LPV+ Y ++ RR TP LI R Sbjct: 257 IAVVPGAIAEYFVALGALAVLPVAMRGRLVPYGIVLRRRRAATPAMRLLIDAVR 310 >UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CY97_PAESJ Length = 305 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 73/245 (29%), Positives = 129/245 (52%), Gaps = 5/245 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+ FV+VA++ + A+ L+++Q A+S+ I +LEE L +LF ++ + + LT Sbjct: 1 MELRQLYYFVKVAKKEHVTQAAEELHVAQSAVSRQIHQLEEELGVKLFLQKGRNLQLTPV 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F + A +IL++L A +I + G+I +G S+ S++P V++ F + HP V Sbjct: 61 GQLFLKRAEVILDDLERAVVEIHEFMDPEKGEIRLGFPHSLGVSVVPQVVAAFRKLHPNV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHE-FTFEKLLEKQFAIFCRPGHPAIG 183 K R +G S+I ++ +GE+D + + P +HE E LL ++ P HP G Sbjct: 121 KFRFRQGMYPSLIRDMVKGEIDLAFISPF--PDEHEQVCGEVLLTEELFAILPPSHPLAG 178 Query: 184 ARSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 + I QL + ++ M + S + E + TP++G E LVA + Sbjct: 179 EQEIDLIQLKEDTFVMFSEGYSLRPIVWEACQEAGFTPKIGFEGEETETIRGLVAAGMGV 238 Query: 242 SKLPE 246 S LPE Sbjct: 239 SLLPE 243 >UniRef50_Q21B25 Transcriptional regulator, LysR family n=2 Tax=Bradyrhizobiaceae RepID=Q21B25_RHOPB Length = 309 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 139/248 (56%), Gaps = 22/248 (8%) Query: 9 QIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESF 68 Q++ F+ +A++G++ A+R LN+ QPALS I +LE+ + QLF+R++ GV LT AGE+ Sbjct: 5 QMQYFLCLAQEGNVTRAARQLNIVQPALSMQIAKLEKSVGKQLFYRQAHGVALTAAGETL 64 Query: 69 YQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRI 128 + A I++ + A+E++ + G ++G+++IGM S ++S + A ++ ++P++++ + Sbjct: 65 VKLAGSIMQNIDHAREEMARLDGTISGRVSIGMITSAAQSTLAASSAKIAARYPEIQLLV 124 Query: 129 MEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGH----PAIGA 184 EG +++ + G+LD I P T +L++Q + RPG PAI Sbjct: 125 CEGYTEMLLDWVAAGQLDIAI--VNMPPGKSTLTAHHILDEQMMLARRPGSALVLPAIVP 182 Query: 185 RSIKQLLDYSWTMPT-PHGSYYKQLSELLD------DQAQTPQVGVVCETFSACISLVAK 237 + +L D +P+ HG L +LD D + P++ + +T SA +VA Sbjct: 183 YA--RLKDIDIVIPSRRHG-----LRRILDAAAAEADFSLKPRLEI--DTLSAICEVVAT 233 Query: 238 SDFLSKLP 245 +D ++ LP Sbjct: 234 TDLVTVLP 241 >UniRef50_A1B7R5 Transcriptional regulator, LysR family n=10 Tax=Rhodobacteraceae RepID=A1B7R5_PARDP Length = 330 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 117/215 (54%), Gaps = 6/215 (2%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M ++++ ++AFVE+ RQG+++ A+ L ++QPA+S++I ELEE + A+L R +GV Sbjct: 1 MERRIRLRHVQAFVEIVRQGNLKRAAEALYLTQPAISRTIAELEEIVGARLMTRSRRGVA 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQL-AGQINIGMGA--SISRSLMPAVISRF 117 LT GE F+ +A L L A + + G++ A ++++ +GA S+ LMP V++ Sbjct: 61 LTAQGEFFHGYA---LNALSALSQGLAGISGEVQAAELSLRVGALPSVLARLMPEVVAEL 117 Query: 118 HQQHPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRP 177 Q P +++ I +G ++ LR +LD I +F +L + A+ RP Sbjct: 118 QQTAPHLRLSIADGGHGHLMGLLRSDDLDVVIGRLGAPETMQGLSFTQLYLEDVAVVVRP 177 Query: 178 GHPAIGARSIKQLLDYSWTMPTPHGSYYKQLSELL 212 GHP + ++++ DY PT + + + LL Sbjct: 178 GHPILSDPDLRRIGDYPVIYPTETAAIHPFVERLL 212 >UniRef50_D2BTL7 Transcriptional regulator, LysR family n=1 Tax=Dickeya dadantii Ech586 RepID=D2BTL7_DICD5 Length = 300 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 70/273 (25%), Positives = 129/273 (47%), Gaps = 9/273 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I +R FV+V + AS+ L ++Q A+S+SI LE+ L L R G+TLTD Sbjct: 1 MDIRALRYFVKVVQSNGFNRASKSLFVTQSAISRSILRLEDELGCTLIKREQSGLTLTDD 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + HA +IL + + +R++ G L+G +NIG+ I+ + A+I F HP V Sbjct: 61 GMIIFDHAKIILSQFESMHNALREKSGPLSGNLNIGLPPVIASTFFSAIIKEFSSCHPLV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPY-DHEFTFEKLLEKQFAIFCRPGHPAIG 183 +++I E ++ + ++ G+++ P+ D+ F +K + + HP + Sbjct: 121 ELKIFELSTTNIYDAMQSGKIE---TAAVLLPFDDNNFELQKFGSDRLVLLVNENHPLVD 177 Query: 184 ARSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 + +L+++ + + + + + + P+V I++V + Sbjct: 178 KEEVDFIELIEHKFVFFSENLRVNELIHSAFGVYNKKPEVAGSSNHLDLIIAMVVAGVGI 237 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYL 274 + LPE M C G+V LPVS P +Y L Sbjct: 238 TLLPESM-CRARKIDGVVTLPVSN--PILSYEL 267 >UniRef50_B1Z4Z1 Transcriptional regulator, LysR family n=5 Tax=Proteobacteria RepID=B1Z4Z1_BURA4 Length = 313 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 82/292 (28%), Positives = 144/292 (49%), Gaps = 17/292 (5%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M + ++AF V GS R A+ +++SQPALS+ I +LEE L +LF R ++ VT Sbjct: 1 MGINFDLTDLQAFRAVVELGSFRKAADAISISQPALSRRIDKLEEALGVRLFERTTRSVT 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT G F A +L++L A IR G + I S++ +P VI+ +H++ Sbjct: 61 LTTVGRVFAPSAEQLLDDLDVALLGIRDVSSSRLGHVTIACVPSVAYYFLPNVIASYHRR 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P+++V++++ +++ + GE DF ++ + G + E F+ LL+++F CR HP Sbjct: 121 FPRIRVKLLDAGANEVLSAVISGEADFGVS--FMGSQEPEIDFKLLLQERFVAACRRDHP 178 Query: 181 AIGARSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQT---PQVGVVCET--FSACIS 233 + + +L +Y + + LL DQA T P+ VCET + + Sbjct: 179 LARKKRVTWNELYEYEYVSVDKTSG-----NRLLLDQALTTVAPRAPSVCETRHVTTLLG 233 Query: 234 LVAKSDFLSKLPEEMGCDPLHGQGLVM-LPVSEILPKAAYYLIQRRDSRQTP 284 L+ ++ +P P H L+ +P+ E + K +++RR TP Sbjct: 234 LIEAGLGVAAVPSM--AMPGHDHPLLTSVPLVEPVVKRRVGIVKRRGRPLTP 283 >UniRef50_Q1GG87 Transcriptional regulator, LysR family n=4 Tax=Rhodobacteraceae RepID=Q1GG87_SILST Length = 321 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 126/261 (48%), Gaps = 5/261 (1%) Query: 14 VEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHAS 73 V V + GSI+ A+R LN+SQPA +K IQ+LE +LF R ++GV T G+S +H Sbjct: 25 VAVGQHGSIQNAARDLNISQPAATKMIQDLEVDFEVKLFERTNRGVVPTVFGDSLIRHGK 84 Query: 74 LILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQL 133 LI ++ A +++ +G++ +G + S SL+P + R Q P+V ++I+EG Sbjct: 85 LIFAQVSNAAQELDDLNEGNSGRVVVGTLLAASPSLLPMAVERVLQDRPKVAIKIVEGTH 144 Query: 134 VSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARSI--KQLL 191 ++ L GE+D + + T EK +++ P HP ++ + Sbjct: 145 EVLMPGLLSGEIDMVVGRLPSHRHRENITQEKFFDERILAVAGPQHPLACESNLTFDDIR 204 Query: 192 DYSWTMPTPHGSYYKQLSELLDDQAQ-TPQVGVVCETFSACISLVAKSDFLSKLPEEMGC 250 + W +P + +Q + Q Q PQ + ++ A +L+ DF+ +P + Sbjct: 205 PHGWILPPIETTLRRQTDQFFIRQDQYMPQTAIESVSYLANRALLRSHDFIGLMPAHVAA 264 Query: 251 DPLHGQGLVMLPVSEILPKAA 271 L + ++ P+ ++P A Sbjct: 265 --LDIENGLLKPLDWVVPFGA 283 >UniRef50_A8GER4 Transcriptional regulator, LysR family n=2 Tax=Serratia RepID=A8GER4_SERP5 Length = 328 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 83/303 (27%), Positives = 149/303 (49%), Gaps = 6/303 (1%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++++ I FV VA++ S+ A+ LN+SQPALSK++ ELE +L R +G LT+ Sbjct: 27 RMRLRHINGFVAVAQERSLSRAADKLNLSQPALSKTLSELEALTGNRLLVRNRQGTLLTE 86 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 GE F +A+ +LE L AA + + A + IG + + ++P I ++ Q HP Sbjct: 87 QGEQFLGYATRVLEALTAAGHALDRLDDAPARVLRIGALPTTALGMLPQSIGQYQQAHPH 146 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 +++++ G+ ++ +L+ GE+D I FE LL + + RPGHP + Sbjct: 147 SRIQVITGKNAELLAQLKAGEIDVAIGRMADPEMMSGLAFELLLLESLLMVTRPGHPLLS 206 Query: 184 AR-SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACIS--LVAKSDF 240 ++++ L Y + +P G+ + +E L G ET SA ++ + + D+ Sbjct: 207 ETITLERALHYPAII-SPKGTVPRHNTESLLSTQGFSLPGQYIETLSASLARQMTLQFDY 265 Query: 241 LSKLPEE-MGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 L +P + D GQ L+ LP+ + A ++ R D + + I+ R G Sbjct: 266 LWFVPSSAVKADIAAGQ-LIPLPLPTQGMEEAVGILTRNDGELSEAVLAFISTVRGIAGA 324 Query: 300 LQS 302 ++S Sbjct: 325 VRS 327 >UniRef50_B2TGB5 Transcriptional regulator, LysR family n=2 Tax=Burkholderia RepID=B2TGB5_BURPP Length = 331 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 81/301 (26%), Positives = 141/301 (46%), Gaps = 7/301 (2%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++K Q+ V++ S+ A+ +M+QP +K ++ELEE + LF R +GV T Sbjct: 23 RLKTRQLALIVQLDTHRSVLRAADAAHMTQPGATKLLRELEETMGVPLFERHPRGVEPTW 82 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 GE +HA +L ELR A +++ + L GQ IG + + +L+P ++ ++ PQ Sbjct: 83 YGEVLIRHARSVLAELRHAYDEVSALKAGLTGQAMIGTEVTAATNLVPQAVALLKKRFPQ 142 Query: 124 VKVRI-MEGQLVSMINELRQGELDFTINTYYQGPYD-HEFTFEKLLEKQFAIFCRPGHPA 181 ++V I ME V ++ L++G+LD + + P D + L E Q A+F R GHP Sbjct: 143 IRVNIEMEFSEV-LVQRLQEGKLDMIV-ARIRNPDDLAALHYAPLAEAQHALFARAGHPL 200 Query: 182 IGARSI--KQLLDYSWTMPTPHGSYYKQLSEL-LDDQAQTPQVGVVCETFSACISLVAKS 238 + +++ +L +W +P Q ++L L+ P V + SL+ S Sbjct: 201 VKRKTLSWDELAPQTWILPPKGNVMRNQFTQLFLERHLALPTDVVESSSLPVITSLLQMS 260 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 D ++ L E L LP L ++ RR R +P +++ R G Sbjct: 261 DMIAPLAREPVRPYCIAGALEPLPFELDLKLGPAGIVTRRGDRLSPGARAMLQALREAAG 320 Query: 299 Y 299 + Sbjct: 321 F 321 >UniRef50_C0ZVG6 Putative LysR family transcriptional regulator n=1 Tax=Rhodococcus erythropolis PR4 RepID=C0ZVG6_RHOE4 Length = 314 Score = 107 bits (266), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 72/271 (26%), Positives = 131/271 (48%), Gaps = 7/271 (2%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++KI + +A +GS+ GA+ +L ++QPA++++++E E L LF R+ +GV T Sbjct: 10 RLKIRHLVLLTTLADEGSMVGAAEVLRVTQPAITRAVREAEAVLEVSLFDRKPRGVLPTQ 69 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 GE F + A +L LR A + I + Q A + +G + + SL+P + + P Sbjct: 70 FGEIFLESARTVLNNLRNAADHIDELQRVGARPVRVGTNLAGAYSLLPQALVALKKTQPN 129 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI- 182 + V ++EG + L + E+D + + + +L ++ I R HPA+ Sbjct: 130 LSVSVIEGLPEELATSLARDEIDLVVGRLDPSGFRNGAHHIRLYDEPVRIVVRQDHPAVQ 189 Query: 183 -GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLVAKSDF 240 +SI+ L+DY W +P +L EL + P + C T S++ +D Sbjct: 190 RHEQSIEDLMDYPWILPGRPTQLRDELDELFSREGLGLPHNIIECSTILTLRSILIGTDA 249 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVS-EILPKA 270 ++ LP +G + L ML S E +P++ Sbjct: 250 IAPLPMLIGA---GDEQLTMLTTSLETVPRS 277 >UniRef50_C7I3E5 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I3E5_THIIN Length = 301 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 107/199 (53%), Gaps = 8/199 (4%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+R FV +A QGS A+ L++SQP LS I+ LE+ + A+L R ++GVTLT A Sbjct: 1 MELRQLRYFVTIAEQGSFSRAAERLHISQPPLSTQIKALEDEIGARLLERSNRGVTLTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +F++ +L +L A E +RQ + AG ++IG + ++P + F ++PQV Sbjct: 61 GAAFFEDIRSVLAQLEHAVERVRQAERGDAGTLSIGFVSIADFGILPPTLKSFRARYPQV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHE-FTFEKLLEKQFAIFCRPGHPAI- 182 V++ E + I ELR ELD +I P D TF LL++ + HP + Sbjct: 121 DVQLHELTTDAQIRELRAAELDLSIGL---APVDEPGLTFTPLLQEPLMLAAPTTHPVLQ 177 Query: 183 ---GARSIKQLLDYSWTMP 198 GA ++ L + +P Sbjct: 178 EGSGAVDLRALAKEPFIVP 196 >UniRef50_B5YJV7 Transcriptional regulator n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJV7_THEYD Length = 302 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 95/180 (52%), Gaps = 2/180 (1%) Query: 8 HQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGES 67 H+++ F VA S S +++++QPA+S IQ LEE +LF R S +TLT AGE Sbjct: 4 HKLKVFCTVAETKSFSKTSEIIHLTQPAVSLQIQALEELYETKLFDRSSGSITLTPAGEI 63 Query: 68 FYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVR 127 Y++A IL A ++I + G + G + IG G ++ ++PAV F ++HP+++V Sbjct: 64 LYKYAKQILTMYAEAAKEISKITGLIKGCVKIGAGTTVGNYILPAVAVDFKKRHPKIRVS 123 Query: 128 IMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARSI 187 + G ++ L +DF I + + P +F + ++ + + C HP +S+ Sbjct: 124 VSIGNAKKILEMLNSSMIDFGIIS--EMPGKSKFIVDSIISDELCVICSADHPLNNQKSV 181 >UniRef50_Q1R0R5 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1R0R5_CHRSD Length = 417 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 76/261 (29%), Positives = 125/261 (47%), Gaps = 9/261 (3%) Query: 9 QIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESF 68 Q+ V VA + A++ L ++QPA+S ++++LE L LF R +G+ TD G Sbjct: 114 QLTVLVAVADLHNEPLAAKRLGLTQPAVSGNLRDLERLLGIALFLRTQRGMLATDGGAVL 173 Query: 69 YQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRI 128 +HA + L EL +D+ QG++ G++ IG S L+P + ++ P + V I Sbjct: 174 IRHAKMALRELSLVSDDLSAWQGEVRGRVVIGTLPLSSSLLVPHAVDALLRELPGLNVTI 233 Query: 129 MEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI--GARS 186 +EG ++ LR GE+D I Q + ++L + A+ R GHP + A Sbjct: 234 IEGTYDALFESLRHGEIDILIGALRQAGTSEDTHQQRLFHDRLAVAARQGHPLMKHAALQ 293 Query: 187 IKQLLDYSWTMP---TPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSK 243 + LLD W P TP ++Q E Q P V V S +L+ SD ++ Sbjct: 294 LSDLLDAQWIAPRQGTPARVSFEQ--EFRSAGLQPPSVVVESGNLSTIRTLLLDSDRVTL 351 Query: 244 L-PEEMGCDPLHGQGLVMLPV 263 + P ++ + GQ L +LP+ Sbjct: 352 VSPHQVFFEVQSGQ-LALLPI 371 Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 40/61 (65%) Query: 6 KIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAG 65 + ++RA + VA GS+ A+ L++SQPA+++++++LE+ L LF R G+ T AG Sbjct: 14 NMRRLRAVIAVAEAGSVMRAAEALHLSQPAVTRAVRDLEKELGLALFERHRSGMLCTTAG 73 Query: 66 E 66 + Sbjct: 74 K 74 >UniRef50_Q221U4 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=Q221U4_RHOFD Length = 328 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 82/296 (27%), Positives = 145/296 (48%), Gaps = 7/296 (2%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++K Q+ + + ++ A++ NMSQPA SK ++++EE F R +GV T Sbjct: 28 KLKTRQMFLLLALDEARNLHQAAKETNMSQPAASKMLKDIEELFGVPFFDRLPRGVRPTL 87 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 GE+ +H + L L Q+ I Q L+GQ++IG+ + S +L+P I+R Q+ P+ Sbjct: 88 YGETMIRHVRMALTNLSQGQDSIATLQAGLSGQVDIGVIITPSTTLVPQAIARTKQEAPR 147 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 + + + G ++ L++G+LDF I + D + +E L E+ R GHP + Sbjct: 148 LCIGVEVGTSNELVERLKRGQLDFLIARIREQEDDLDLLYEDLSEETECAVARVGHPLL- 206 Query: 184 ARS---IKQLLDYSWTMPTPHGSYYKQLSELL--DDQAQTPQVGVVCETFSACISLVAKS 238 ARS + L W + +P GS + +++ + +TP V S SL+ ++ Sbjct: 207 ARSDLGLNDLAAAGWIL-SPRGSILRHRFDMMFRRIELETPANVVEATAISVITSLLQQT 265 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 DFL +P E+ + L +LP+ ++ +I RRD +P L+ R Sbjct: 266 DFLHVMPLEVARYYVRCSELAILPIELPCKMDSFGVIARRDQLLSPGAKLLLQHLR 321 >UniRef50_C1XNG0 Transcriptional regulator, COG0583 n=2 Tax=Meiothermus RepID=C1XNG0_MEIRU Length = 312 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 85/288 (29%), Positives = 141/288 (48%), Gaps = 20/288 (6%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 Q+ + Q+ F+ VA GSI A LN++Q ++++I++LEE L A+LF R ++G+ LT Sbjct: 1 MQISLKQLVYFIAVAESGSISKALTSLNVTQSVVTEAIKKLEETLGAELFTRHARGMILT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 AG F +HA +L LR A++ IR+R GQ+N+G+ + ++ +P ++ RF + P Sbjct: 61 HAGHQFLRHAHEVLAALRNAEQAIRERPDATTGQLNLGVTSLVTAYYLPYLLDRFERVFP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 V+V ++E + + + L GELD + LL + ++ HP + Sbjct: 121 GVQVAVVEDRRGYIEHLLINGELDVAVMNVSMVD-KQALETRTLLRAPWRVWLPTNHPLV 179 Query: 183 --GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT------PQVGVVCETFSACISL 234 A S++ L + + Y + EL + Q P+V V ++ A SL Sbjct: 180 QQEAVSLENLREERF--------LYLKNDELEEVTQQIYRLSGFPRVAVRTDSIEAMRSL 231 Query: 235 VAKSDFLSKLPEEMGCDP--LHGQGLVMLPVSEILPKAAYYLIQRRDS 280 VA ++ LP M P L G L P+ E LP+ + RR S Sbjct: 232 VALGIGVAVLPNLM-YRPWSLEGDRLESRPLLENLPRLEIGVAWRRGS 278 >UniRef50_C8Q1V0 Transcriptional regulator, LysR family n=1 Tax=Pantoea sp. At-9b RepID=C8Q1V0_9ENTR Length = 312 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 59/193 (30%), Positives = 102/193 (52%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 ++K++Q+ +EVA QGSI A+R L+++QPA+SK+IQE+E + + R S+GVTL Sbjct: 1 MKIKLNQLDVLLEVAAQGSIGKAARTLHLTQPAISKTIQEMESEIGMPIVERSSRGVTLN 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 + G+ +HA I L A+E+I G+ Q+ +G ++ + + ++ Q+ P Sbjct: 61 EYGQVLLRHARDIDRSLNQAREEIDHLLGKAMRQLRVGFTSAAAWGPFTTTLLQYQQRFP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 VK+ MEG+ + + L +D + + G +E L AI HP Sbjct: 121 GVKLIAMEGRPHQLYDALENNRIDLAVISSTDGMLIAPMYYEMLYSLSNAIIAGKHHPIT 180 Query: 183 GARSIKQLLDYSW 195 S+++LL Y+W Sbjct: 181 HTTSLRKLLAYTW 193 >UniRef50_B8KMT5 Transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KMT5_9GAMM Length = 300 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 116/209 (55%), Gaps = 20/209 (9%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 V I+Q+ AF VAR GS A+ L++SQPALS +I+ LEE L +LF R ++ VTLT Sbjct: 3 VPINQVMAFSAVARTGSFAEAALRLHLSQPALSIAIKNLEEALGGKLFARTTRSVTLTPE 62 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++FY A +L + + +D+R G+++I + + +L+P +++ FH+Q+P + Sbjct: 63 GKAFYPVARRLLSDWEQSLQDVRNHFSLRRGKLDIAAMPTYTINLLPKILASFHRQYPNI 122 Query: 125 KVR---IMEGQLVSMINELRQGELDFTINTYYQGPYDH-EFTFEKLLEKQF-AIFCRPGH 179 V ++ +V M+ E R EL T + P D + TF+ L +F AIF + H Sbjct: 123 NVTVHDVIAESVVEMVREHR-CELGVTFD-----PDDSPDLTFQPLFIDRFIAIFPK-QH 175 Query: 180 PAIGARSI--KQLLDYSWTMPTPHGSYYK 206 P +G S+ + LLDY PH S K Sbjct: 176 PLLGKGSLRWRDLLDY------PHISLQK 198 >UniRef50_C6WP46 Transcriptional regulator, LysR family n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WP46_ACTMD Length = 294 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 80/296 (27%), Positives = 135/296 (45%), Gaps = 10/296 (3%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 +V H++ EV R GSI A+ L+ + A+S+ I LE L ++ R +GVT T Sbjct: 5 RVDAHRLTLLAEVVRAGSIAAAAGRLSFTASAVSQQIAALERELGGRVLDRHPRGVTPTP 64 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 G + HA + ELRAA+ R G GQ+ IG ++ +L+P V++ F + HP+ Sbjct: 65 LGAAMLGHAEAVAGELRAAEATARALLGGAPGQVTIGTFSTAGTTLLPPVLAAFRRDHPE 124 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQG---PYDHEFTFEKLLEKQFAIFCRPGHP 180 V +R++E + + + E+D I Y G P T L ++F + GH Sbjct: 125 VGLRLLELEPPEGYDLVVTREVDLLITHRYPGSALPPARGLTRVLLRRERFRLVLPVGHR 184 Query: 181 AIGAR-SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 G R S+ +L W +P L L D++ +V + A ++LV Sbjct: 185 LAGGRPSLGELAGEEWISGSPGTHNRICLEHLADERGLALRVAYETRDYQAVLALVEAGL 244 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 ++ +PE + + + +L ++ P +L+ R PL A L+ + RR Sbjct: 245 GVAFVPEAV----VGRARVAVLDCADAGPDREVHLVH--PVRPAPLVADLVGRLRR 294 >UniRef50_A3UKE5 Probable transcriptional regulator n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UKE5_9RHOB Length = 289 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 74/261 (28%), Positives = 127/261 (48%), Gaps = 14/261 (5%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + R FV A G++ A+ L++SQPA +KS+ +LE L LF R + + LT Sbjct: 2 LSLRTARLFVASADAGTLTAAAERLHVSQPAATKSLAQLEADLGGALFERAGRKLVLTRM 61 Query: 65 GESFYQHASLIL---EELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 GE+ A +L E+L++ E R R G+ G +++G G S++ L+P ++RF++ Sbjct: 62 GEALLPRARALLQQAEDLKSEAE--RWRSGE-DGVLSVGAGPSVTYRLLPEAVARFYRAG 118 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 V++ I G ++++++R+G LD + +D L E+ A RPGHPA Sbjct: 119 RTVQLTIRAGAANALLDQVRRGALDLVAADMGEAEHDPALRVHALPEEGVAALVRPGHPA 178 Query: 182 IGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 + + ++ + TP +Q L + P G+VC+ F+ A SD + Sbjct: 179 LASAPPER---FPLATATPPDRLARQ---PLPWGGERP--GLVCDDFTVLALACAASDHI 230 Query: 242 SKLPEEMGCDPLHGQGLVMLP 262 P + + GLV LP Sbjct: 231 LAAPHSVMDRLMAEHGLVPLP 251 >UniRef50_B0RYQ5 Transcriptional regulator, LysR family n=11 Tax=Proteobacteria RepID=B0RYQ5_XANCB Length = 435 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 118/245 (48%), Gaps = 6/245 (2%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 +V + Q++A V V GS A+ +SQPA+ +++Q L + + L RR K V T Sbjct: 103 RVSLGQLQALVAVDVAGSYSLAAVRTGVSQPAIYRAVQTLADVVEVPLIVRRGKSVHATP 162 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 + L L EL A +++ + Q AG++ +G+ L+P ++RF + HP Sbjct: 163 VALRLLRQVRLALAELGAGLDEVAALRSQHAGRVTVGVMPLARAVLLPRTLARFARSHPG 222 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V ++EG ++ +LR+G LD I + H+ + L + I R GHP G Sbjct: 223 AIVSVVEGPYPELLAQLREGGLDLLIGALREPLPVHDVVQDALFDDAAVIVARSGHPLAG 282 Query: 184 -ARSIKQLLDYSWTMP---TPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 A + QLLDY W + TP + ++++ D Q + P + C + L+ + D Sbjct: 283 QAYAFAQLLDYPWVVAATGTPLRARWERMFR--DQQLEPPPPRIECGSVLVIRGLLLEDD 340 Query: 240 FLSKL 244 +L+ + Sbjct: 341 WLTVM 345 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 38/62 (61%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 F++ + + A VA GS+ A+ +N+SQPAL+++I LE+ L +LF R G+ T Sbjct: 5 FEINLRHLYAMHVVAEAGSVSAAAPQVNLSQPALTQAIARLEQQLGVRLFDRHPGGMAGT 64 Query: 63 DA 64 +A Sbjct: 65 EA 66 >UniRef50_Q1YUG7 Transcriptional regulator n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YUG7_9GAMM Length = 383 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/250 (27%), Positives = 118/250 (47%), Gaps = 7/250 (2%) Query: 9 QIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESF 68 QI+AF+ +A+ G+ AS +S +L ++I++LE L L R+ +G+ LTD G++ Sbjct: 89 QIKAFLALAQCGNFAEASNSTGLSSASLHRAIRDLEIFLKQDLTRRKGRGLALTDFGQTQ 148 Query: 69 YQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRI 128 + SL ELR D+ +G +G I IG ++PA + F HP V +RI Sbjct: 149 ARRFSLAGAELRYMINDLMALKGIASGSIVIGAMPLCRARVLPAAVVEFQASHPNVDIRI 208 Query: 129 MEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI-----G 183 EG +I L G+LDF I + D L E + R GHP Sbjct: 209 SEGSFTELIEPLLSGQLDFMIGALREHGSDPGLVHTPLFEDAPVVVARTGHPLFDRLEAA 268 Query: 184 ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLVAKSDFLS 242 ++++L ++ W +P + ++ L + P++ V C + ++ K+D L+ Sbjct: 269 QATVRELAEFPWCVPHSNSPLREKWEALFTAEGLPVPRISVECGSVIVNRQILLKTDCLT 328 Query: 243 KL-PEEMGCD 251 L P+++ + Sbjct: 329 ILSPDQVAVE 338 Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 43/67 (64%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 ++ I +RAF++ G+ A+R +N+SQPA++++I +LE+ L LF R+S G+ T Sbjct: 4 WRFNIRHLRAFLKTVEMGTSTAAARAVNLSQPAVTQAIAKLEDQLDFALFDRQSGGLVPT 63 Query: 63 DAGESFY 69 DA + Y Sbjct: 64 DAAKLIY 70 >UniRef50_A5VC48 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VC48_SPHWW Length = 321 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 82/293 (27%), Positives = 135/293 (46%), Gaps = 9/293 (3%) Query: 14 VEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHAS 73 V +A GSI A+ L +SQP SK +Q+LE+ L A LFFR ++GV T+ G F +HA Sbjct: 17 VAIAENGSILRAAGALGLSQPTASKLLQDLEDSLHAPLFFRGNRGVEPTELGREFVRHAR 76 Query: 74 LILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQL 133 +IL +L ++ +G + +G + S L+P + R + P + +RI+EG Sbjct: 77 VILAQLGQTSMALQALSTGASGTVALGTLLAASSHLLPTTLLRLRRTRPNISLRIVEGTN 136 Query: 134 VSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARSI--KQLL 191 ++ L GELD + Q + ++ E LL FA+ R GH G + +LL Sbjct: 137 DHLMPRLLSGELDLVLGRLSQIRHRNDVDQEPLLRDVFAVISRRGHKLAGRAGVPLHELL 196 Query: 192 DYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLVAKSDFLSKLPEEMGC 250 + W +P P + +Q L D +P + +F L+ SD L P + Sbjct: 197 GFDWILPPPETTLRRQFEALFHDAGLNSPPAAIESISFLTNHRLLLDSDMLGVWPRPV-I 255 Query: 251 DPLHG---QGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 D HG GL ++ + P + +R+ + +P ++ + R L Sbjct: 256 D--HGPDRDGLAIILPAATFPVGTIGISRRKGTLLSPAAEAVAAELRATAAEL 306 >UniRef50_B5JLL8 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLL8_9BACT Length = 297 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 68/250 (27%), Positives = 128/250 (51%), Gaps = 14/250 (5%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ +Q++ F+ VAR+ S A++ N+SQP+LS I +LEE L LF R+ KGV L++ Sbjct: 1 MEFNQLKCFLAVAREQSFTRAAKACNLSQPSLSYQIAKLEEELGESLFIRKPKGVELSEP 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ A I EE R R+ +AG++ G+ +I+ L+P ++ F +++PQ+ Sbjct: 61 GKLLLDGAHRIREEQEKIVSTFRTREKLMAGEVRFGIIPTIAPYLLPPLMKAFRREYPQI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFT--FEKLLEKQFAIFCRPGHPAI 182 ++ + E + ++ E+ GEL+F + + P +++ KL E++ + HPA Sbjct: 121 RLIVRESRTSQLVKEVVDGELEFAVVSDIAQPLLKKYSLHLNKLFEEELLLAVPNAHPAC 180 Query: 183 GARSIK-QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVG-----VVCETFSACISLVA 236 ++ Q +D S + G+ + D Q Q G +VCE +++V+ Sbjct: 181 ALPELRVQSIDESELILLSEGNCLR------DQTMQLCQRGDKLSSLVCEQLPTQLAMVS 234 Query: 237 KSDFLSKLPE 246 ++ +PE Sbjct: 235 GGLGVAIVPE 244 >UniRef50_P77782 Pep2 n=2 Tax=root RepID=P77782_ENTAE Length = 320 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 67/245 (27%), Positives = 115/245 (46%), Gaps = 4/245 (1%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 +A V + ++R + VAR GSI A+ + ++QPALS+SI +LE +LF R ++GV Sbjct: 7 VARHVTLRELRLLLAVARSGSILKAANEIGLTQPALSRSIADLEGAFGVRLFDRTNRGVA 66 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 T GE + A+ + EELR A ++R G++ IG ++ L+P +I Sbjct: 67 PTPHGEVLLRRATGVFEELRQAVNELRALADAAHGELRIGGTPAMCAGLLPRIIGTVRSD 126 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P+++ + E + + +E+ LD + + H+ FE L E + + HP Sbjct: 127 RPRLQFHVAELESGPLASEVVGRSLDLGLGREHAVRESHDLVFEGLFEDRLFVVAGSQHP 186 Query: 181 AIGARSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLVAK 237 RSI ++ L + W +PT G+ L Q P+ + + L+A Sbjct: 187 LAERRSISLEETLRHHWVLPT-EGAVTAHLQGEFGRQGLAIPEAAITTMSMLVRCELIAT 245 Query: 238 SDFLS 242 FL+ Sbjct: 246 GSFLT 250 >UniRef50_A1WHL2 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=A1WHL2_VEREI Length = 305 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 56/182 (30%), Positives = 101/182 (55%), Gaps = 2/182 (1%) Query: 7 IHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGE 66 + +RAFV VA GS R A++ L++SQPALS+ +++LE+ + +LF R ++ V L+ G Sbjct: 5 LSDMRAFVAVADLGSFRAAAQTLHISQPALSRRVEKLEQAMGFRLFERTTRKVELSAIGR 64 Query: 67 SFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKV 126 SF A +L EL A + +L GQ+ + S L+ + F ++ P+++V Sbjct: 65 SFVPKARHVLSELENALLGMTDMSDRLRGQVTVACVPSSVPHLLAGAVEAFQRKFPRIRV 124 Query: 127 RIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARS 186 R+++ ++ + + E DF ++ Y G + + F+ L+++ F + C PGHP R Sbjct: 125 RLIDETATEILLAVVRSEADFGVS--YWGAQEPDLEFQGLVQEPFVLACLPGHPLARKRR 182 Query: 187 IK 188 +K Sbjct: 183 VK 184 >UniRef50_B8IWD6 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IWD6_METNO Length = 304 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 82/299 (27%), Positives = 144/299 (48%), Gaps = 7/299 (2%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M ++K Q+ + ++ S+R A+ LNM+QP +K +Q LE + LF R +G+ Sbjct: 1 MLRRLKSRQLLLLIALSEARSLRKAAAALNMTQPTATKLLQNLENNVGLALFERGRRGMQ 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 T GE +HA L+L +L + +++ G+I IG S L+ ++R QQ Sbjct: 61 PTIYGEVIIRHARLVLADLNRTRLELQSLSSGGTGRIRIGAVISAIPVLLARAVARLKQQ 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 H + V I G +++ L +GELD + EF +E+L E+ I R GH Sbjct: 121 HSGLSVTIDVGTSDALVPALAKGELDVLLARPLVLADRPEFNYEELTEEPIQIVARAGHA 180 Query: 181 AIGARSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFS--ACISLVA 236 + ++ L +WT+ P G+ +++ E + Q + V ET S I+L+ Sbjct: 181 LAASERLRLGDLAGSAWTL-LPPGTPMRKVLEPIFAQIGPGEPRNVVETSSIMTMIALLQ 239 Query: 237 KSDFLSKLPEEM-GCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 +S+ L+ +P ++ + HG L LP+S +Y ++ RRD +P T + + + Sbjct: 240 ESEMLAVMPADVTNFNTRHGL-LCRLPISLPPIMGSYGIVTRRDRPLSPSTTTFLQHLK 297 >UniRef50_A1WN33 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WN33_VEREI Length = 311 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 65/246 (26%), Positives = 127/246 (51%), Gaps = 3/246 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + I ++ F VA GSI A + L++SQ A++++IQ LE L + LF R ++G+ LT Sbjct: 1 MSISIRTLQYFNAVAETGSISAAMQTLDISQAAITEAIQRLEAHLGSMLFRRHARGMALT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 AG F +H+ LIL + +A+ + R + G+++IG + + +P ++ RF + P Sbjct: 61 HAGHEFLRHSHLILNAVSSAENALAVRPDAMTGELSIGAVSPLMGYYLPGLLERFRRSFP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 +V VRI+E ++ + + GE+D + H F +L+ + ++ GH + Sbjct: 121 RVTVRIIEESGSTIEHLIVNGEIDVALTLTSHLENHHAFHTLQLVRSPWHLWLPTGHRLV 180 Query: 183 GAR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 GA+ ++++L + + + + + +L ++ P++ + A SLVA + Sbjct: 181 GAKPVTLRELHNEA-VIVLRNDELERTTGDLWLRESVRPRIVAKTRSVEAVRSLVATGNG 239 Query: 241 LSKLPE 246 + LPE Sbjct: 240 ICVLPE 245 >UniRef50_Q47P44 Putative LysR-family transcriptional regulator n=1 Tax=Thermobifida fusca YX RepID=Q47P44_THEFY Length = 301 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 64/198 (32%), Positives = 95/198 (47%), Gaps = 5/198 (2%) Query: 8 HQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGES 67 +++R VEVAR GSI A+ L+ + PALS+ + +LE L L R GV LT+AG Sbjct: 5 NRLRVLVEVARAGSITAAAERLSFTPPALSQQLAKLERELGCALLERGRNGVRLTEAGRV 64 Query: 68 FYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVR 127 H +L ELR A+ +R GQ +++G AS +L+P+ ++ F + HP V++ Sbjct: 65 LLDHGERVLGELREAERAVRATLGQHPSTLSLGAFASAGTTLLPSALAEFRRAHPHVRLA 124 Query: 128 IMEGQLVSMINELRQGELDFTINTYYQG---PYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + + + + G+LD I Y G P E+LL + GHPAI Sbjct: 125 LSDVEPPDGYGLVTSGDLDLLITHCYPGTELPSATGLRRERLLTDPLMLVLPDGHPAIDK 184 Query: 185 RSIK--QLLDYSWTMPTP 200 I L D W P Sbjct: 185 PRITLADLADEEWICGAP 202 >UniRef50_C8WSN1 Transcriptional regulator, LysR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSN1_ALIAD Length = 290 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 59/172 (34%), Positives = 91/172 (52%), Gaps = 3/172 (1%) Query: 9 QIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESF 68 Q+ F+ VA S R A+ + +SQPALS++IQ+LE L A LF R ++GV LT GE+F Sbjct: 5 QLEYFLAVAEYQSFRRAADAIRVSQPALSRAIQKLEGDLGAPLFVRTAQGVRLTPCGEAF 64 Query: 69 YQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRI 128 HA L E+ A + + GQ G +++G+ S+ +P VI F + HP V VR+ Sbjct: 65 LPHARQALAEVAAGARKVAELAGQARGVLHVGLIYSLGTRFLPDVIRTFTRTHPGVTVRL 124 Query: 129 MEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 E ++ +L GE+D T P+ T ++L+++ HP Sbjct: 125 SEAPTQKLLQQLDAGEIDIAFCTPQHAPH---LTLVEILQEELVAIVPLDHP 173 >UniRef50_Q46QI8 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46QI8_RALEJ Length = 312 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 55/179 (30%), Positives = 101/179 (56%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + ++ F +A + S A+R LN++QPAL++SIQ LEE L QL R + G+ LT+A Sbjct: 2 LSLRRLEHFAVLAEERSFSRAARRLNLTQPALTRSIQTLEETLELQLVDRAASGLVLTEA 61 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + + +L ++RA Q + + +G G +N G+G+ + + + +V++R + +P + Sbjct: 62 GAMVLERSRRMLGDVRALQREAGRLRGFETGTVNFGVGSFPAAAFLGSVMTRVARDYPGL 121 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 VR+ ++ +L++ ELDF + + P +F +L ++ F RPGHP G Sbjct: 122 VVRVETESWRRLLEKLQRDELDFVVAVTHSLPPPADFQVRELPAQRMGFFVRPGHPLAG 180 >UniRef50_A5EKL1 Transcriptional regulator, LysR family n=2 Tax=Bradyrhizobium RepID=A5EKL1_BRASB Length = 343 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 78/302 (25%), Positives = 141/302 (46%), Gaps = 10/302 (3%) Query: 7 IHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGE 66 + Q++ V +A + A++ N++Q ALS+S+Q LE+ + +LF R S+ V +T GE Sbjct: 6 LRQLQQLVFLADERHFAKAAKRANVTQSALSRSLQTLEDAVGMRLFDRSSRSVEITPVGE 65 Query: 67 SFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKV 126 HA +L ++R + AG++ +G+GA + +L+P ++R + +HP V+V Sbjct: 66 RLVAHAQTLLSSAADLGREMRMLRSGDAGEVAVGVGAFTALTLLPEALARLYAEHPSVRV 125 Query: 127 RIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG--A 184 +++ ++++ L+QG+LDF + D E L + +CRP HP G A Sbjct: 126 TLVQDNWRALMHLLQQGKLDFFLAHTSDIRGDDGLQVEALGNQPGHFYCRPAHPLAGRSA 185 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELL-DDQAQTPQVGVVCETFSACISLVAKSDFLSK 243 S + L + + K+L++L+ D V + E S + +SD L Sbjct: 186 LSARDLAGQRFASVIIPEDFSKRLNQLIASDDGNGFAVTLQSENVSLLTQVAIRSDLLLL 245 Query: 244 LPEEMGCDPLHGQGLVMLPVSEI-------LPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 + + L LV L V E+ L A + ++ + +P L+ R E Sbjct: 246 AGDAVLTSELASGQLVRLDVKELEEPRISGLLMAQFGMLTLKGRTLSPAAMVLMDMVRAE 305 Query: 297 CG 298 G Sbjct: 306 AG 307 >UniRef50_B1FSS9 Transcriptional regulator, LysR family n=1 Tax=Burkholderia graminis C4D1M RepID=B1FSS9_9BURK Length = 417 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 71/291 (24%), Positives = 135/291 (46%), Gaps = 2/291 (0%) Query: 9 QIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESF 68 Q+R + +AR GS A++ L +SQPA+ ++ +++E+ + L+ RR V+ AG F Sbjct: 116 QVRCHIAIARAGSASEAAQQLGISQPAVHRAARQIEQTVGVSLYRRRVHSVSANAAGLEF 175 Query: 69 YQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRI 128 + SL L E+ A+E+I +GQL+G++ IG+ + L+ VI R +++P V + Sbjct: 176 ARCLSLALYEIAQAREEIAYARGQLSGKVAIGVLPLMPPRLVARVIQRLRERYPSAHVTV 235 Query: 129 MEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARSI- 187 EG +++ +LR G +D + + +L + + R GH +SI Sbjct: 236 DEGSHAALLRDLRMGTIDIIVGGLREPRLTGAVRETELFADPYVVAVRKGHRLARKKSIA 295 Query: 188 -KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSKLPE 246 + + +Y W +P + + + P V V + + ++++ +SD ++ L Sbjct: 296 PRDIANYEWVVPQQNVPRRSVIDSIFARLPIRPPVVVETSSLAMMMAMLVESDCITLLSR 355 Query: 247 EMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 + G +V L + A R D T + + I R+EC Sbjct: 356 SQIREAYPGSEIVALELKTPEADRAVGYTVRADWLGTAVQSGFIEYLRQEC 406 >UniRef50_B2JVU4 Transcriptional regulator, LysR family n=43 Tax=Proteobacteria RepID=B2JVU4_BURP8 Length = 322 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 67/232 (28%), Positives = 119/232 (51%), Gaps = 12/232 (5%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M ++ ++AF V GS R A+ +N+SQPALS+ I +LEE L +LF R ++ VT Sbjct: 1 MGINFDLNDLQAFRAVVELGSFRKAAEAVNISQPALSRRIDKLEEALGVRLFERTTRSVT 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT G F A +L++L A IR G + I S++ +P ++ +H++ Sbjct: 61 LTTVGRVFAPSAEQLLDDLDVALLGIRDVSSSRLGHVTIACVPSVAYYFLPGAVASYHRR 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P+++V+I++ ++ + GE DF ++ + G + + F+ LL+++F CR HP Sbjct: 121 FPRIRVKILDSSANDVLAAVISGEADFGVS--FMGSQEPDVEFKMLLQERFVAACRRDHP 178 Query: 181 AIGARSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQ---AQTPQVGVVCET 227 + + +L ++ + + LL DQ A +P++ VCET Sbjct: 179 LARKKRVTWNELYEHEYVSVDKTSG-----NRLLLDQALGAVSPRMPSVCET 225 >UniRef50_B0RTV9 Transcriptional regulator, LysR family n=11 Tax=Proteobacteria RepID=B0RTV9_XANCB Length = 345 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 73/281 (25%), Positives = 133/281 (47%), Gaps = 3/281 (1%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 A ++K Q+ + + Q S+ A+ +M+QPA SK + E+E+ L +LF R ++GV Sbjct: 33 AARLKTRQLLLLLHLHEQRSVLRAAEAASMTQPAASKLLAEMEDMLGVKLFERHARGVEP 92 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T G + A + E+ AQE+I + GQ +IG + +L+P I+ ++ Sbjct: 93 TWYGHVLIRRARAAMSEIGRAQEEIAALRAGRMGQASIGTVVNPGTNLVPQAIAEVKREF 152 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P + VR+ ++ +L G+LD I E FE L ++ ++ R GHP Sbjct: 153 PDILVRVEMDYSRPLVAKLLDGQLDIVIGRILGPEGVGELEFEPLADEPHSVIARAGHPL 212 Query: 182 IGARSIKQ--LLDYSWTMPTPHGSYYKQL-SELLDDQAQTPQVGVVCETFSACISLVAKS 238 +++ L+ + W +P +L S ++ QTP + + +L+ S Sbjct: 213 ASRANLQHADLVRHGWILPPADSVLRARLDSMFMEHGVQTPTNAIETSSLPVTSTLLRGS 272 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRD 279 D L+ LP E + + L +LP+ + ++ +I+RRD Sbjct: 273 DMLTALPVESVAPLIQAKLLTVLPIELGVRMESFGIIRRRD 313 >UniRef50_Q46WN8 Transcriptional regulator, LysR family n=3 Tax=Cupriavidus RepID=Q46WN8_RALEJ Length = 341 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 109/208 (52%), Gaps = 13/208 (6%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M V + +R F+ VA GSI A+ L+++QPALS I++LE+ L LF R +GV+ Sbjct: 1 MGIPVDVRGLRGFLAVAAAGSISRAAETLHIAQPALSLQIRQLEDTLGVALFTRSHRGVS 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 +T AG+ F HA IL+ + A ED+R G++ IG+ S+++ L ++ ++ Sbjct: 61 VTAAGQRFEHHARDILKRVDLACEDVRDLVTDPEGRVAIGLPQSMAKILTVPLVRETIRR 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P+V+++++E + N L G +D I +Q D F+ L+++ I PG Sbjct: 121 WPKVRLQVIELSTGYIPNHLLTGHID--IGLTFQANADPGLQFDHLVDEDLVIVAEPGRF 178 Query: 181 AIGAR----------SIKQLLDYSWTMP 198 A GAR +++L DY +P Sbjct: 179 A-GARRRDVLPANAIRLRELSDYPMILP 205 >UniRef50_Q4KE95 Transcriptional regulator, LysR family n=7 Tax=Pseudomonas RepID=Q4KE95_PSEF5 Length = 303 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/280 (25%), Positives = 127/280 (45%), Gaps = 4/280 (1%) Query: 13 FVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHA 72 F +A G + A++ LN SQPAL+KSIQ LEE +LF R +G+ LT GE + + Sbjct: 9 FDTIAELGHLGRAAQKLNRSQPALTKSIQRLEESFGTKLFEREGRGIKLTAVGELLQRRS 68 Query: 73 SLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQ 132 + + + ++R + G I +G AS++ L+P + + ++ P + + ++ GQ Sbjct: 69 RQLQQNIAETHREVRDFASGVLGNIRLGCAASMAEHLLPQMTATLLERAPDITLNLVIGQ 128 Query: 133 LVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA-RSIKQLL 191 + LR G LD I ++G D + L E + + HP ++ L Sbjct: 129 DDLLRESLRSGRLDMVICPMFEG--DPHLSHHTLFEDRAVVVASRDHPIFATPMRLRDLC 186 Query: 192 DYSWTMPTPHGSYYKQLSELLDD-QAQTPQVGVVCETFSACISLVAKSDFLSKLPEEMGC 250 Y W +P S + + + + P V + T S L+AK+ LS L E Sbjct: 187 AYRWVLPGTRVSARRWIDNVFQSHELPLPSVQIETNTISLLPRLIAKTGLLSFLARETLD 246 Query: 251 DPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLI 290 D L +P+++ + + ++ R + +P +L+ Sbjct: 247 DFKGIAHLREVPLAQTCMRRSIVVLVRAEGYLSPAAQALL 286 >UniRef50_D0DE25 Pca operon transcriptional activator PcaQ n=1 Tax=Citreicella sp. SE45 RepID=D0DE25_9RHOB Length = 311 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 81/292 (27%), Positives = 137/292 (46%), Gaps = 15/292 (5%) Query: 13 FVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHA 72 F+ A G++R A+ L +SQPAL+ S++ LE+ + A LF R KGVTLT AGE FY+HA Sbjct: 15 FLAAADAGNLRRAAETLGLSQPALTVSLRNLEQEIDATLFERSVKGVTLTPAGELFYRHA 74 Query: 73 SLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQ 132 + R AQ++++ + AG + IG G + S +++P V+ + +P + + ++ G Sbjct: 75 GALRTASRQAQDELKALRTGEAGTLRIGAGVAWSATVLPEVLRDMRRDYPGLSIDLLTGV 134 Query: 133 LVSMINELRQGELD-FTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI--GARSIKQ 189 + + +G +D + G + E+L+ + HP + G ++Q Sbjct: 135 GDQLAMQFAEGRIDLLLVAGGLAGQPLEDARREQLVTLPMELVVARDHPLVGQGPVGVRQ 194 Query: 190 LLDYSWTMPTPHGSYYKQLSELLDDQ--AQTPQVGVVCETFSACISLVAKSD----FLSK 243 + Y W S+ LS LL + P++ + + +A + V +D +S Sbjct: 195 IAGYDWVGFADDDSFL-HLSALLTARHGLAPPRMAMRANSVAALGTFVRGTDAVMVVISS 253 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 L M CD + LV LP+ E L L R P+T + RR Sbjct: 254 LASAM-CD----ETLVTLPLQEPLWDMPVSLFCRELVAGRPVTLDFTERLRR 300 >UniRef50_Q1YFP6 Putative pca operon transcription factor PcaQ n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YFP6_MOBAS Length = 307 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 98/195 (50%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 +V++ ++ F+EVAR S+ A+ LN+SQPA+SK++ ELEE L A+L R G TLT Sbjct: 6 RVRLRHLKTFIEVARSASLGKAAVRLNVSQPAVSKTLSELEEMLGARLIARGRGGATLTP 65 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 G F+ +AS L L E + + ++ IG S++ ++P + P+ Sbjct: 66 VGRMFHSYASASLAALSQGIEGVAETLAASQLRLTIGALPSVAARIVPDAAIEMARTAPE 125 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 + I+ G ++++L G LD I Q F+F +L ++ ++ RPGHP + Sbjct: 126 AGLTIVSGPNAYLLSQLASGALDLVIGRLGQPEAMAGFSFAQLYSERVSLVVRPGHPLLS 185 Query: 184 ARSIKQLLDYSWTMP 198 A + Y P Sbjct: 186 AADPALIAAYPLIFP 200 >UniRef50_B1J4U2 Transcriptional regulator, LysR family n=2 Tax=Pseudomonas putida RepID=B1J4U2_PSEPW Length = 311 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 3/201 (1%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 A++V + Q+ FV VA G A+ LN+SQ +S+ +++LE L L R +GVTL Sbjct: 7 AYRVDLKQLECFVRVAEFGGFTRAAATLNLSQSVVSRQVRQLELELGQHLLLRNGRGVTL 66 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T AG ++H IL +++ A+ED+++++ L G++ IG+ SI+R +++ F + Sbjct: 67 TPAGTRLFEHGQGILRQVQVAREDLQEQRDSLTGKVVIGLPPSIARRHTVGIVTAFQKAF 126 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P + I EG SM L G LDF + Y + + FE L + + G Sbjct: 127 PGCSLGIKEGLSHSMREWLLLGRLDFAL--LYNPAQNAQLHFEPLQSEPLWLIGAAGACL 184 Query: 182 IGARSIKQLLDYSWTMPT-PH 201 A + L DY +P+ PH Sbjct: 185 APAVPLATLGDYPLIIPSQPH 205 >UniRef50_B1XZI4 Transcriptional regulator, LysR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XZI4_LEPCP Length = 295 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 85/286 (29%), Positives = 132/286 (46%), Gaps = 7/286 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ QIR F+ V GSI +RML +SQP L+KS+ LE L A L R GVTLT Sbjct: 1 MRLAQIRDFLAVVESGSISATARMLGVSQPGLTKSLGALEAELGASLLKRTPSGVTLTRL 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++F+ E AQE++ R GQ Q+ +G G + ++P + F ++ P V Sbjct: 61 GQAFHVRVRAGYAEFAKAQEEL-ARGGQT--QVALGFGPFFAAQIVPQAVMIFREKFPDV 117 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDH-EFTFEKLLEKQFAIFCRPGHPAIG 183 ++R++EG + +R LD T+ D F+ + + R GHP Sbjct: 118 QLRLVEGLGHATRPLVRDATLDMTLAPRAPSVRDDPAMRFKPIAHLDQIVVARRGHPLAQ 177 Query: 184 ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSK 243 ARS L W + L L P+ CE+FSA +L+A SD L+ Sbjct: 178 ARSAASLASAEWLCIVRRDVTAEALRAL---GVPEPRRITECESFSAMHTLLAGSDMLAV 234 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASL 289 + P GQ + +P+++ +P L R D+ + A+L Sbjct: 235 VQHPFLDMPQVGQAIQEIPIAQRMPGLTVGLHMRADAPLSKPAAAL 280 >UniRef50_Q1M6M7 Putative LysR family transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1M6M7_RHIL3 Length = 312 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 75/266 (28%), Positives = 124/266 (46%), Gaps = 7/266 (2%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 MA ++ ++ F V QGS+ A+R L++SQPALS S+ LE L QL R KG+ Sbjct: 1 MALEIDPKKLLYFAAVIEQGSLNRAARQLSVSQPALSTSMDRLEAELGMQLLERGPKGIV 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 T G+ Y HA LI EE++ A+ D+ + I IG S++ ++P +S++ + Sbjct: 61 ATRKGDILYCHARLIREEIQLAERDLLNADDCRSESIRIGSLPSLASKIVPMALSKWRET 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEK--LLEKQFAIFCRPG 178 H + ++E V ++ L + + DF I + +D + L + Sbjct: 121 HEGGHLEVVENAQVDLLTGLLRRDFDFVIG--FTKVFDMLDGLRQRVLFRDTLRVIAGIN 178 Query: 179 HP--AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVA 236 HP + + L+ Y W PT ++ + A PQ+ VC + S SLVA Sbjct: 179 HPLRELETLTWGDLVKYPWISPTSRRTHTVLDHIMRTMDAPLPQI-TVCGSVSLLKSLVA 237 Query: 237 KSDFLSKLPEEMGCDPLHGQGLVMLP 262 +++ L+ LP + + Q L LP Sbjct: 238 ETEHLALLPAHAVREEVAEQRLYELP 263 >UniRef50_A5VH98 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VH98_SPHWW Length = 306 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 81/284 (28%), Positives = 133/284 (46%), Gaps = 6/284 (2%) Query: 8 HQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGES 67 ++RAF+EV SI A+ +NMSQ ALS+ IQ LEE LF R GV LT AGE+ Sbjct: 7 RRLRAFMEVVEARSIGRAAIAMNMSQSALSRLIQALEEMHGIDLFQRLPTGVVLTPAGEA 66 Query: 68 FYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVR 127 HA L+L E+R A + ++ +G G +G A+I+RS++P + R + P + V+ Sbjct: 67 LVPHARLLLFEMRQASDSLQAIRGLKRGVARVGAVAAITRSILPGAVRRMLDETPGLLVQ 126 Query: 128 IMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGAR-- 185 + + + + L ++D I+ + + E + ++I C H A Sbjct: 127 VTDSLDDRLASALTGNQIDLMISGKVELQGEIHLVGECQFDDTYSIICANDHALAKASTV 186 Query: 186 SIKQLLDYSWTMPTPHGSYYKQLSELLDDQ--AQTPQVGVVCETFSACISLVAKSDFLSK 243 SI +L W MP P G+ + L E + + + P V + + +A S V + L Sbjct: 187 SIADVLSLPWVMP-PLGATPRVLFEDIVRRLGMEMPAVDIESSSPNAIASFVIGTGRLGW 245 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTA 287 +P + + L + + ++E A + I RR P A Sbjct: 246 MPTPLFTNELSAGSVHRIRIAE-FELARRFFIYRRAKGLLPAPA 288 >UniRef50_Q46PU2 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46PU2_RALEJ Length = 315 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 80/271 (29%), Positives = 124/271 (45%), Gaps = 15/271 (5%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 +++ QI F +V R GSI A++ LNM+QPA++K I ELE L A L R ++GVT T+ Sbjct: 11 KLRFAQILVFEQVLRSGSILRAAQALNMTQPAVTKVIHELESHLGAPLLIRGNRGVTTTE 70 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 GE + A +L ELR ++I + +GQ+ IG S S L+P I +Q P Sbjct: 71 FGELVARRAKTLLAELRHLTDEISAFREGTSGQVLIGTLISASAVLLPRAIQLLKEQAPA 130 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEF-------TFEKLLEKQFAIFCR 176 V V + GQ+ ++ L G+LD + P D + E L + + Sbjct: 131 VSVTLRVGQMDQLLPALAVGDLDVVVGRI---PEDVSWRATAPGLEAEILHREPLCVVGG 187 Query: 177 PGHPAI--GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSAC--I 232 HP + +++ L DY W +PT S + L D VV E+ S + Sbjct: 188 VHHPMASRASTTLQALSDYPWILPTRDSSLRQTAERLFYDTGLALPANVV-ESLSVMTNV 246 Query: 233 SLVAKSDFLSKLPEEMGCDPLHGQGLVMLPV 263 +L+ L +P + L M+P+ Sbjct: 247 ALMFDQKTLGLMPRSAARQFVDTGSLAMIPL 277 >UniRef50_C0CTN6 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CTN6_9CLOT Length = 330 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 54/165 (32%), Positives = 92/165 (55%), Gaps = 2/165 (1%) Query: 16 VARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHASLI 75 +A+ SI A+R L ++QPAL+K ++ LEE L QLF R ++LT AG+ F + A+LI Sbjct: 18 IAKHHSISKAARELCITQPALTKYLKRLEEDLGTQLFDRAVIPISLTPAGKKFVEKAALI 77 Query: 76 LEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQLVS 135 LE R+ Q D+ Q + G++ +GM + +P V+ F ++P+++V+I EG Sbjct: 78 LEIERSLQYDLNQISTDVRGKVTVGMNTEFCSNTIPYVLPEFRFRYPEIEVQIREGHNRL 137 Query: 136 MINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 + +EL G++D + Y EFT++ + + + HP Sbjct: 138 LFDELESGKVDIVYSAYSMS--AMEFTYDLIYSEPILLAMPADHP 180 >UniRef50_B9KUK0 Transcriptional regulator n=2 Tax=Rhodobacteraceae RepID=B9KUK0_RHOSK Length = 300 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 75/298 (25%), Positives = 132/298 (44%), Gaps = 17/298 (5%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M+ ++ +R F+ + GS R A+ LN+SQPAL++ +Q E L QLF R ++ V+ Sbjct: 1 MSINFELLDLRTFLAIIDLGSFRKAAEALNISQPALTRRMQAFEYKLGNQLFERSTRNVS 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT+ G A L E+ + +G I+I + + S +P+VI RF Sbjct: 61 LTNVGREIEPMARRTLAEIDEQFGSLSDAGATRSGFISIACIPTSTLSFLPSVIGRFQTD 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P+ + RI++ +++ + G DF + + G D +F F L E +F C PG P Sbjct: 121 FPRARFRILDNSSAQVLDSVFDGTADFGLT--FTGQSDSQFKFTALFEDEFVALCAPGDP 178 Query: 181 AIGARSIKQLLDYSW----TMPTPHGSYYKQLSELLDDQAQTPQVGVV----CETFSACI 232 I Q +W T+P + L+D + + + A + Sbjct: 179 ------IAQKARIAWSELNTLPLIGVNRSSGNRTLMDTRLSKDGIKLNWAHEVNHVIAAV 232 Query: 233 SLVAKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLI 290 LV ++ +S +P M DP L ++P+ + +++R +RQ L + + Sbjct: 233 GLVRQAVGVSVVP-RMAYDPRLMGDLRIIPLVNPVVSRRLGILERSGARQGRLVTAFL 289 >UniRef50_Q2NZJ9 Transcriptional regulator n=9 Tax=Xanthomonas RepID=Q2NZJ9_XANOM Length = 333 Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 64/247 (25%), Positives = 123/247 (49%), Gaps = 2/247 (0%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++K+ +R + RQ S+ ASR+LN++QPAL++++QE+EE + A LF R S+GV Sbjct: 11 RIKVRHLRVIEALDRQKSLLRASRVLNVTQPALTRALQEIEEIVGAPLFERHSRGVRPNA 70 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 GE Q A ++L +LR AQ++ A I +G + L+PAV++ ++ P Sbjct: 71 MGEVLVQTAHVVLGQLRRAQDNFEGLLQDDALTITVGALPVAASGLLPAVLAALYRTEPT 130 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP--A 181 ++VR++ G+ ++ +L E+D + Y + L + A+ R HP A Sbjct: 131 LRVRLLHGRTDELLPKLAGNEIDLVVGRLYPLARYDALIRKVLYQDPIALVARSDHPLFA 190 Query: 182 IGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 G I + Y +PT + +++++ + + + + S ++ +D + Sbjct: 191 NGPVRIAEAAAYRQVLPTLSQHVERDVAQVMREHGLATRDQLRSSSASFTREILLGTDSI 250 Query: 242 SKLPEEM 248 + +P M Sbjct: 251 AVMPSMM 257 >UniRef50_Q88JE8 Transcriptional regulator, LysR family n=4 Tax=Pseudomonas putida RepID=Q88JE8_PSEPK Length = 312 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 77/279 (27%), Positives = 138/279 (49%), Gaps = 12/279 (4%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K+HQ+RA V + GSI AS++++++QPALS+SI+ELE + L R KG+ LT+ Sbjct: 1 MKLHQLRALVAIHNAGSILEASKLMHITQPALSRSIKELEREVGFTLLQRSHKGMALTEE 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSL--MPAVISRFHQQHP 122 G+ +HA+L++E +R Q + Q G ++IG+ S++ L + I F +++P Sbjct: 61 GKRVIRHANLVVESIRRLQIEAASIQDAALGAVSIGV-TSLTAMLDGVDESILAFRRKYP 119 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDH-EFTFEKLLEKQFAIFCRPGHPA 181 +VK+ I + + ++ LR G LDF I + Q P +E L + + C + Sbjct: 120 RVKITITDLRPSQILQRLRDGSLDFAITS--QQPLSRLSLDWEALGSIKGRVICHASNRQ 177 Query: 182 IGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLVAKSDF 240 ++S++ L W Q +L + + PQ V C + + L+ ++ Sbjct: 178 KFSQSLRTLQYAPWISLDELSDQASQFHQLFEANGLRVPQNTVECTSVMMALKLLKNTES 237 Query: 241 LSKLPEEMGCDPLHGQGL----VMLPVSEILPKAAYYLI 275 L + E+ D G+ V + V E++P L+ Sbjct: 238 LMTI-SELAVDQGFTYGIDCEFVAMAVQELIPDYPINLV 275 >UniRef50_C4KVR2 Transcriptional regulator, LysR family n=25 Tax=Betaproteobacteria RepID=C4KVR2_BURPS Length = 325 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 97/184 (52%), Gaps = 1/184 (0%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 + +V + +RAFV VAR+GS A+ L ++Q L+K+I+E E+ L +F R ++ + L Sbjct: 15 SMKVSLRHLRAFVAVAREGSFTAAAGALCLTQSTLTKTIREFEQALGVHVFERNTRRIAL 74 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T G +F A IL +L A + + Q+ +G + + G + + ++MP VI H Q Sbjct: 75 TPYGAAFLVDAVRILNDLDLALDGVNQQLLGNSGTVRVASGLAFASTVMPCVIRALHAQE 134 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P + V +++ +I + GE+D I +Y G + + ++L + + G+P Sbjct: 135 PGIHVDLLDDTSGGVIRRIESGEVDVGIGSYV-GMAGNALSVRRILSARLGVLFPVGYPK 193 Query: 182 IGAR 185 I +R Sbjct: 194 IPSR 197 >UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=Rhodobacter sphaeroides KD131 RepID=B9KVK0_RHOSK Length = 321 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 2/177 (1%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 + + +RAFV A S R A+ +++SQPAL++ IQ+LE L L R ++ V+LT Sbjct: 15 NIDLEDLRAFVATAEMQSFRAAADSIHLSQPALTRRIQKLEATLGVSLLERTTRRVSLTA 74 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 G F A IL++L + +R+ + +G ++I + + +P VIS F ++ P Sbjct: 75 VGRDFLPRARRILDDLETSLLSVREIAERRSGLVSIACIPTAAYYFLPDVISAFTEEFPA 134 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 ++ RI + ++ + E DF I G D + TF+ L+E+ F + CR HP Sbjct: 135 IRFRIFDAGANEVLQSILNREADFGITLL--GADDPDVTFDPLIEEPFLLACRRDHP 189 >UniRef50_B5XV59 Transcriptional regulator, LysR family n=5 Tax=Klebsiella RepID=B5XV59_KLEP3 Length = 295 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 75/251 (29%), Positives = 132/251 (52%), Gaps = 17/251 (6%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +KI QI+AF+ +AR+G++ A+ + ++Q LS+ + LE L+A LF R G+ L++ Sbjct: 3 MKIKQIQAFITLAREGNMTLAAEKMGITQSGLSRLLLSLEADLSATLFERHKHGMALSEY 62 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +F +A +L + A+E+I +G G + IG +S+ S ++ FHQ+HP++ Sbjct: 63 GSAFLPYALTMLNTEQKAREEIALIRGAGKGILRIGCVSSLLTSHFIDKLAAFHQRHPRI 122 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLL-------EKQFAIFCRP 177 +RI++ + +EL + L I+ GP H+ EK++ + + I R Sbjct: 123 HLRIVD----RIDSELFKLLLMHDIDIALCGPLPHD---EKIVVRGKINWQDRICIVARQ 175 Query: 178 GHPAIGAR--SIKQLLDYSWTMPTPHGSYYKQLSELL-DDQAQTPQVGVVCETFSACISL 234 HP A S++ +LDY W MP P + L ++ Q PQ + C + SA + Sbjct: 176 YHPLHQAANLSLEAMLDYPWIMPPPLSTPMNILEDIFRAHQLPCPQPVIECASSSAIKAF 235 Query: 235 VAKSDFLSKLP 245 + +SD L+ +P Sbjct: 236 LCESDLLTSMP 246 >UniRef50_Q7W9G9 Probable LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W9G9_BORPA Length = 296 Score = 100 bits (248), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 79/286 (27%), Positives = 132/286 (46%), Gaps = 12/286 (4%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R FV VA A+ L + QP LS IQ+LE + L R+ +GV LT+A Sbjct: 1 MELRHLRYFVAVAEDLHFTRAAARLGIGQPPLSLQIQQLEREIGTPLLLRQPRGVALTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGAS-ISRSLMPAVISRFHQQHPQ 123 G F Q A +L A E R+ G I +G AS + +P+ I + ++P Sbjct: 61 GARFLQDARAVLHAAELAVETARRLGHGEQGDIAVGFTASAVFHPYLPSAIRAYRDRYPG 120 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPY--DHEFTFEKLLEKQFAIFCRPGHPA 181 V++ + E +++ LR GE+D + + PY D EF E++L++ + P HP Sbjct: 121 VRIALSESNARALLAGLRSGEVDV---AFVRPPYALDDEFASERVLDEPMLVALPPDHPL 177 Query: 182 IGARS--IKQLLDYSWTM-PTPHGS-YYKQLSELLDDQAQTPQVGVVCETFSACISLVAK 237 R+ + L + + + P P G+ Y + + TP+V ++ ISLVA Sbjct: 178 CRKRTVPVAALAEQDFVLYPRPIGAGLYDAIMQACQRAGFTPRVIQEAPQMASIISLVAA 237 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQT 283 ++ +P M + G+V P+ P+A + RR R Sbjct: 238 GVGIAVVPAAMRH--MGAAGIVYRPIRGDAPRALLDMAYRRQPRSA 281 >UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=Geobacter RepID=B5EGJ2_GEOBB Length = 300 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 66/232 (28%), Positives = 118/232 (50%), Gaps = 6/232 (2%) Query: 7 IHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGE 66 + Q+R F+EVA+ + A+ L+++QPA+S ++++LE+ L LF R+ K V+LT GE Sbjct: 3 VRQLRYFIEVAKVKNFTKAAEALHIAQPAVSMAVKKLEQELELSLFNRQDKKVSLTAEGE 62 Query: 67 SFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKV 126 F HA IL++LRAA+ ++ + +G G++ +G+ IS P +I F + +PQ+ + Sbjct: 63 IFLPHAKRILDDLRAAELEMAELKGLSKGEVRLGIPPMISAYFFPDIIRDFKKSYPQLHL 122 Query: 127 RIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARS 186 ++ + + QGELD + G + + L ++ I P HP +S Sbjct: 123 SVLGEGAWRIQKMIGQGELDMGVVA--GGNFPETLEVRRFLREEIVICVPPDHPFAQRKS 180 Query: 187 IKQLLDY--SWTMPTPHGSYYKQLS-ELLDDQAQTPQVGVVCETFSACISLV 235 + L+++ + G Y ++ E+L P + FS SLV Sbjct: 181 V-SLVEFIREPLVFYKEGYYIREFFLEVLKGAGSAPNIVFETNLFSLVKSLV 231 >UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Bacillales RepID=C6IV95_9BACL Length = 305 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 67/245 (27%), Positives = 125/245 (51%), Gaps = 5/245 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q++ FV+VAR+ + A+ L+++Q A+S+ I +LE+ L LF ++ + + LT Sbjct: 1 MELRQLQYFVKVARKEHVTQAAEELHVAQSAVSRQIHQLEQELGVNLFMQKGRNLHLTAV 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F +IL++L A ++ + G+I +G S+ ++P+V++ F + +P V Sbjct: 61 GQLFCSRVEMILKDLDRAVSEVHEFLDPEQGEIRLGFPNSLGIHMIPSVVAEFRKLYPNV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHE-FTFEKLLEKQFAIFCRPGHPAIG 183 K R +G ++I ++ GE+D + + P +H+ T +L + PGHP G Sbjct: 121 KFRFRQGTYPTLIRDVVSGEVDLAFISPF--PENHDQVTGNVVLTEDLVAILPPGHPLAG 178 Query: 184 ARSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 +SIK QL D + + + S + + TP++ E LVA + Sbjct: 179 EQSIKLSQLKDEKFILFSKGYSLRPIVWHACLEAGFTPKIAFEGEETDTIRGLVAAGMGV 238 Query: 242 SKLPE 246 S LPE Sbjct: 239 SLLPE 243 >UniRef50_UPI0001C3136F transcriptional regulator, MarR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3136F Length = 312 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 137/295 (46%), Gaps = 15/295 (5%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I ++R EVA +GS+ A+ LN + A+S+ + LE + L R + +TLTDA Sbjct: 2 LDIRRMRVLREVANRGSMSAAADALNYTPSAISQQVATLEREIGVALVERGPRSITLTDA 61 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + +HA +IL L A+ ++R+ G G++ + + +++ I+ FH +HP V Sbjct: 62 GRALAEHAEIILARLEIAEMEVREIAGLRGGRLRLATFRTAGETIVARAITAFHARHPDV 121 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDH------EFTFEKLLEKQFAIFCRPG 178 ++R++EG+ + ++ GE+D + YDH E + E+LL + P Sbjct: 122 ELRLVEGEPEDYLPLIKSGEVDLGLGF----EYDHIPRLQVESSEERLLMEDVIGLALPL 177 Query: 179 HPAIGARSIKQLLDY---SWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLV 235 + R +L D SW TP S + + D +V + + +LV Sbjct: 178 RHRLAERETIELADLAGESWIGSTPRSSVHGFTEAICRDAGFEAEVKFETDDYHVAEALV 237 Query: 236 AKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLI 290 A ++ LP + H + +V V+ P + + R ++P T++++ Sbjct: 238 ATGVGIAFLP-RLAAVTAHPE-IVFRHVTPAPPARRVFAVYRAGGLRSPTTSAMV 290 >UniRef50_A9AT28 LysR family transcriptional regulator n=9 Tax=Burkholderia RepID=A9AT28_BURM1 Length = 419 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 113/247 (45%), Gaps = 5/247 (2%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 A+ + +++ F +AR + A+R L ++QPA+S +I+ LE G LF R +G+ L Sbjct: 105 AYLLNTRRLQLFSTLARHRHMPSAARALGVTQPAVSSAIRILESGAGFALFHRHPRGLLL 164 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSL-MPAVISRFHQQ 120 T GE+F H L ELR +D+ G + G + +G + R+L +P ++R + Sbjct: 165 TADGETFLLHVRRALNELRHVADDVAALHGSIQGVVTVG-ALPLGRTLILPEAVARVVTR 223 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P+V+V E +++ +R G++DF + + E+L+ + + R HP Sbjct: 224 FPKVRVITDESAYEALVAGVRAGDIDFILGALRANDAAGDLENERLMSENLVVLARRDHP 283 Query: 181 AIGARS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACI-SLVAK 237 R+ ++ L W +P H L P + V A I L+ Sbjct: 284 LARVRNLGLRSLAAAQWILPRSHAPARGLFDALFRRMKLKPPMPTVESADLAVIRGLLLH 343 Query: 238 SDFLSKL 244 SD L+ L Sbjct: 344 SDMLAVL 350 >UniRef50_A3VLR4 Putative LysR family transcriptional regulator n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VLR4_9RHOB Length = 301 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 72/293 (24%), Positives = 133/293 (45%), Gaps = 4/293 (1%) Query: 9 QIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESF 68 + AFV VA+ S+ A+ L+++QPALS+ I+ LEE + AQLF R G++LT G++ Sbjct: 7 HLSAFVTVAQARSLGRAAEQLHITQPALSRIIRNLEETVGAQLFERHPLGMSLTPHGQAL 66 Query: 69 YQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRI 128 A L+L + AA E++R G G + IG A L+ +S+ HP +++R+ Sbjct: 67 LPRAELLLADWGAALEELRSISGATTGTLRIGCVAGAVDPLIRHAMSQMLDAHPNIQLRV 126 Query: 129 MEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA--IGARS 186 + +I++L G +D + G + + + ++ R HP + + Sbjct: 127 TDAIEDRLIDDLLAGRIDLAVAGAVSGASQFDLEQVYVTSDWWQVYVRRDHPLQDMARPA 186 Query: 187 IKQLLDYSWTM-PTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSKLP 245 + L Y W M P +++K P + V + + ++ + S ++ +P Sbjct: 187 LSDLARYRWVMVPEDSIAHFKLREAYHATSMTVPDIAVETRSLTVAVNALLASPLVTLMP 246 Query: 246 EEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 E + + + L + + K Y+ +RR T T + + F R G Sbjct: 247 ESLLRHEVELGLISQLTIPALAWKRELYIYRRRRGSLTFATRAFL-DFLRGTG 298 >UniRef50_B1YXM2 Transcriptional regulator, LysR family n=3 Tax=Burkholderia cepacia complex RepID=B1YXM2_BURA4 Length = 302 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 108/203 (53%), Gaps = 10/203 (4%) Query: 12 AFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQH 71 AF EVAR GSI + L++SQPA+++ ++ELE+ L LF R +GV LT+ G+ Y++ Sbjct: 8 AFYEVARAGSISAGAERLHVSQPAVTREVRELEDRLGIVLFDRMPRGVALTEGGKLLYEY 67 Query: 72 ASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEG 131 AS I A++++ + G +G + IG ++ +P I+ F+ +HP+V + + Sbjct: 68 ASRIFTLADTAEKELAELAGLGSGHMKIGASGTLGVFFVPEAIAAFNARHPRVAIDLT-- 125 Query: 132 QLVSMINELRQG--ELDFTINTYYQGPYDHEFTFEKLL-EKQFAIFCRPGHPAIGAR-SI 187 V+ + G +L FTI + +GP+D + + + A+ GHP G + Sbjct: 126 --VTNTERVEAGLHDLSFTIG-FIEGPFDDSILHARRIGSDEIAVVAAAGHPLAGTKVRA 182 Query: 188 KQLLDYSWTMPTPHGSYYKQLSE 210 + L+D + M P GS + + E Sbjct: 183 RDLVDRTVIMREP-GSGTRAIIE 204 >UniRef50_B8IBA3 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IBA3_METNO Length = 237 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 1/197 (0%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++++ Q+R + S+ A+ +L + QPALSKS+ E+E+ L A+LF R S+GV T+ Sbjct: 9 RLRLSQLRIVDALEVHRSLLKAATVLGVRQPALSKSLHEIEDILQARLFDRHSRGVRPTE 68 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 AG F + A IL E+R E+ G + +G+ + ++P ++R HP Sbjct: 69 AGMVFVRAARRILAEVRRLDEEFDLLAAPGGGSVAVGVLPVAAAGMLPGALARLKATHPD 128 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI- 182 + +R+ +G+ ++ L GELDF + Y +F E L + +I R P Sbjct: 129 IPIRLQQGRTEELLPLLASGELDFVVGRLYAPALPDQFLREPLRTEPISILARAEPPIFA 188 Query: 183 GARSIKQLLDYSWTMPT 199 G +I+ L Y +PT Sbjct: 189 GPATIEALRRYELVLPT 205 >UniRef50_Q1LLE9 Transcriptional regulator, LysR family n=2 Tax=Burkholderiaceae RepID=Q1LLE9_RALME Length = 317 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 93/176 (52%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + ++ V VA +GS+ A+R +++SQPAL++SIQ LEE A LF R ++GVTLT Sbjct: 22 MNLKRLEHLVAVAEEGSLAAAARRVHLSQPALTRSIQTLEEEAGAVLFDRGTRGVTLTAV 81 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + A IL E D+ + G + IG+GA + L+P V+ H++ P + Sbjct: 82 GRMVTERARRILFETHCLTRDLTLVRQHEIGSVQIGLGAFPAAMLLPEVLCLLHREWPGL 141 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 ++ ++++ LR LDF + P E ++L E+ +F R GHP Sbjct: 142 QIATEVSDPRALLDALRAERLDFVVIEQSTVPTLAELEVQRLPEESAGLFVRQGHP 197 >UniRef50_Q1AVR3 Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVR3_RUBXD Length = 305 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 78/266 (29%), Positives = 127/266 (47%), Gaps = 10/266 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+R FV VA + S GA+R L +SQP LS I+ LE L +LF R ++ V LTD+ Sbjct: 1 MELRQLRYFVAVAEEQSFGGAARRLRISQPPLSLQIKALERELGVRLFDRNTRRVMLTDS 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +F + A +ILEE+ A+E + + L G++ +G +S + SL+P I F ++ V Sbjct: 61 GRAFLERARVILEEVERAKETAKGAERGLLGKLEVGFVSSATLSLLPPAIRLFRERFGGV 120 Query: 125 KVRIMEGQLVSMINELRQGELDF-TINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP--A 181 ++ + E I+ L GE + + P H E + E++ + GHP A Sbjct: 121 ELELRELTSAQQIDALYNGETRVGLVRLPLRAPGIH---LEPVFEERLVVALPSGHPLEA 177 Query: 182 IGARSIKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 + S++ + D T + Q+ EL P V + LVA Sbjct: 178 LDRVSLEAIADLPLIFFTRQLIPGLHAQIIELFQRVGAFPNVAQHAVHLQTIVGLVASGV 237 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSE 265 +S LP + +G+V LP+ E Sbjct: 238 GISILPS--SAMRVRREGIVYLPLDE 261 >UniRef50_A3VCK6 Pca operon transcriptional activator PcaQ n=2 Tax=Rhodobacterales RepID=A3VCK6_9RHOB Length = 297 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 2/177 (1%) Query: 7 IHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGE 66 + IR F+ VA+ GS+ A+R LN SQPA+S+++ E+EE + + LF R +GV+LTDAG Sbjct: 1 MRHIRCFLAVAKAGSVTHAARQLNSSQPAVSRTLAEIEEIIGSPLFDRTGRGVSLTDAGA 60 Query: 67 SFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKV 126 +H + L ++ A + + ++ G+ +++R++ ++ F + P + V Sbjct: 61 KLMRHFDIALTQIEAGA--VAAQGDSAKARVAFGVLPNVARTVAVDAVAEFKRTAPDIDV 118 Query: 127 RIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 I + +I L +GELDF + + TFE L + RP HP + Sbjct: 119 EIHWAAVDELIARLARGELDFILGRLLSLEHLKGVTFEHLYAEDIIFVARPDHPFVA 175 >UniRef50_A8IAC4 Transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IAC4_AZOC5 Length = 313 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 96/187 (51%), Gaps = 2/187 (1%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M+ + + Q+RAFV VA+ GS A+R+L +SQ ALS+++Q+LE L +L R ++ V Sbjct: 1 MSMNMNLRQLRAFVAVAQTGSFSRAARLLGLSQSALSQAVQQLEADLGVRLLDRTTRSVQ 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 L+ G F +L +L +D+R + G + + S++ L+P V+++F + Sbjct: 61 LSAIGREFLPGVQRVLADLDHQLQDLRDLKEHRRGHVTVTCVPSVALRLLPQVLAQFQEA 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 HP V V + E +I LR G+ + + D + TF LL FA+ R HP Sbjct: 121 HPMVSVAVREAPRHQIITALRSGDAELGVANVPGDDPDLDSTF--LLTDSFALVMRRDHP 178 Query: 181 AIGARSI 187 S+ Sbjct: 179 LAAHESV 185 >UniRef50_A3K824 Transcriptional regulator, LysR family protein n=1 Tax=Sagittula stellata E-37 RepID=A3K824_9RHOB Length = 307 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 72/244 (29%), Positives = 114/244 (46%), Gaps = 5/244 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I Q+R V AR S R A+ LN +QPA+SK I+ LE+ + +L R GV T+ Sbjct: 1 MDIRQLRYLVFTARYSSFRIAADKLNATQPAVSKGIRVLEQSVGVRLLDRGPWGVKPTEY 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE Q+ ++L A+ +I G G++ +G A+ R ++P RF ++ P+V Sbjct: 61 GERLIQYGEVLLALTEEARTEIDAMLGAKRGRLRVGSLATTVRGVVPTAARRFLKKSPEV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + E ++ +L +G +D + + D E + LL I HP + Sbjct: 121 DLTFYEELSPALQAQLLKGSIDVAVMSRPHDFPDDELEYRALLNSPMQIVADITHPLLQR 180 Query: 185 R--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSAC--ISLVAKSDF 240 S+ L Y W +P L L +AQ P VCET S+ +S++A S + Sbjct: 181 ERLSLGDLTRYQWILPARPDPDRLTLDSLF-SKAQLPLPKAVCETTSSRFQVSMLAGSPW 239 Query: 241 LSKL 244 LS L Sbjct: 240 LSYL 243 >UniRef50_Q0B1K1 Transcriptional regulator, LysR family n=2 Tax=Burkholderia ambifaria RepID=Q0B1K1_BURCM Length = 301 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 53/172 (30%), Positives = 98/172 (56%), Gaps = 2/172 (1%) Query: 9 QIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESF 68 +++A +A GS AS LN+SQPAL++++Q +E+ + +F R ++ + +T AGE F Sbjct: 13 ELQAVCTIAECGSFMAASITLNVSQPALTRTVQRVEQAIGLDIFRRTTRRLEITAAGEEF 72 Query: 69 YQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRI 128 A+ IL +LR + + +R+ +L GQ+ + S++ +P +I+R+ + P+V+++I Sbjct: 73 VALANRILADLRISVDSMREITDELRGQVIVSTVMSVACIHLPGIIARYSKSKPRVEIQI 132 Query: 129 MEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 EG ++ ++R G DF I Y +E + KL + F + GHP Sbjct: 133 REGVYGKIVEDVRGGVADFGIT--YIDDVPNELSTIKLAIEAFHVVMPNGHP 182 >UniRef50_C6B6X6 Transcriptional regulator, LysR family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6B6X6_RHILS Length = 302 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/195 (32%), Positives = 93/195 (47%), Gaps = 3/195 (1%) Query: 7 IHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGE 66 + ++R FVEVA Q SI A++ LN+SQPALS++I++LE+ LF R GV L+ G Sbjct: 1 MRELRQFVEVANQRSISRAAKKLNISQPALSRAIRQLEDSYGVPLFNRTGAGVELSVYGS 60 Query: 67 SFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKV 126 + Y A IL L A+E+I QG+ I I G ++P +I F + HP V V Sbjct: 61 ALYSRAVRILPALDEAKEEIEHLQGRAKAVIRIATGDLWGLVILPGIIKAFSRTHPGVVV 120 Query: 127 RIMEGQLVSMINELRQGELDFTINTY-YQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGAR 185 + + +R G D T Y+ + FE L + I+C H A Sbjct: 121 HVEIADDGTRFEGMRHGVYDLVFGTLSYKYEAVMQVEFETLARQATYIYCHKDHHLAKAA 180 Query: 186 SI--KQLLDYSWTMP 198 ++ LL W P Sbjct: 181 TVTLDDLLRQRWISP 195 >UniRef50_A1WHM4 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WHM4_VEREI Length = 481 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 72/295 (24%), Positives = 136/295 (46%), Gaps = 6/295 (2%) Query: 12 AFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQH 71 + + VA GS A L SQP + +++ +LE + LF R +G LT++GE+ + Sbjct: 150 SLIAVADMGSGPRAGECLGCSQPTIHRNLLKLEYLVGVSLFQRTPRGTRLTESGEALLRG 209 Query: 72 ASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEG 131 L E+ A++++ G+L G++ + S L+P I R +HP++ V +++G Sbjct: 210 VKLAFAEIAIAEDELAAFGGRLQGRVVVAALPLSSAFLLPRAIDRLLSKHPRLNVTVVDG 269 Query: 132 QLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI---GARSIK 188 +++ LR ++D + E E L + + R HP + AR ++ Sbjct: 270 TYDALVQMLRCADVDMIVGALRLNSPPSEIAQEMLFDDGLTVIARAQHPCLLTQTARGLR 329 Query: 189 QLLDYSWTMPTPHGSYYKQLSELLD-DQAQTPQVGVVCETFSACISLVAKSDFLSKL-PE 246 +L+ Y W +P P+ + P+ + + S +L+ +SD L+ L P Sbjct: 330 ELVRYPWIVPLPNTPARAAFEHAFRIEGVACPEAQLQVNSPSVVRNLLLESDRLALLSPL 389 Query: 247 EMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQ 301 ++ + GQ LV +P++ A + RR+ +P +A L+ + R LQ Sbjct: 390 QVDAELRTGQ-LVQVPLALRDASRAIGVATRRNGSLSPGSAGLLDELRVLAATLQ 443 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 49/78 (62%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 + +VK+ +RA V V QG++ A+ +L++SQPA+++++Q++E GL LF R ++G+ Sbjct: 38 SLRVKLRGLRAIVAVVDQGAVGKAAEVLHLSQPAVTRALQDIEAGLGFPLFDRTARGMLP 97 Query: 62 TDAGESFYQHASLILEEL 79 T AG A EEL Sbjct: 98 TAAGRILGTRARRAFEEL 115 >UniRef50_C5CTK1 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CTK1_VARPS Length = 322 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 110/201 (54%), Gaps = 8/201 (3%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++K+ ++ V VA++ ++ A + L ++QPA+SK+I ELEE + QL RR +GV LT Sbjct: 9 RLKLRHLQCLVMVAQERNLVRAGKALALTQPAVSKTIAELEEIVGRQLLLRRRRGVELTP 68 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQL-AGQINIGMGA--SISRSLMPAVISRFHQQ 120 A E +HA + LR +E + Q A Q+ + +GA +++ +L+P ++R + Sbjct: 69 AAEVLVRHA---VSALRGLREGMGLAMDQPEADQLRVAVGALPNMAANLLPEAVARLYAS 125 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 HP ++VR++ G ++ +LRQGE+D + Q + FE+L + + RPGHP Sbjct: 126 HPALRVRVVSGTNAQLMTQLRQGEIDLVLGRLAQASAMADLAFEQLYSEPLLLVVRPGHP 185 Query: 181 AIGAR--SIKQLLDYSWTMPT 199 R ++ L + +P Sbjct: 186 LAARRRPTLDALAAHPLVLPV 206 >UniRef50_A6F002 Transcriptional regulator, LysR family protein n=1 Tax=Marinobacter algicola DG893 RepID=A6F002_9ALTE Length = 299 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 62/185 (33%), Positives = 93/185 (50%), Gaps = 4/185 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + +H +R F VA Q S A+ +++SQPA+S++++ELEE L L RR V LT+A Sbjct: 1 MNLHLLRTFASVAEQRSFSRAAEAIHISQPAVSRAVRELEEQLGMALLERRGGQVRLTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G YQHA I ++A D+R RQG G + IG +I +P VI+ F +Q P + Sbjct: 61 GAELYQHARAIFALEQSAMADLRGRQGLERGSLTIGASRTIGTYFLPPVIAEFLRQFPAI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLL-EKQFAIFCRPGHPAIG 183 VRI+ + L ELD + +G + E E + I HP + Sbjct: 121 DVRIISENTELIQRRLLAYELDI---AFIEGSVEDSRVEEVFWHEDELVILAHSDHPLLN 177 Query: 184 ARSIK 188 +S+K Sbjct: 178 RKSLK 182 >UniRef50_C5SQ96 Transcriptional regulator, LysR family n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SQ96_9CAUL Length = 413 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 69/235 (29%), Positives = 108/235 (45%), Gaps = 2/235 (0%) Query: 9 QIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESF 68 Q+RAF+ V R GS A+R L++SQPA+ ++ +ELE L L R + + T +GE Sbjct: 108 QLRAFLFVERFGSFSEAARQLSLSQPAIHRATRELELVLGVSLLVRVGQYLRPTASGERL 167 Query: 69 YQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRI 128 + L L ELRA +DI +G++ IG +L+P +SRF+ P ++ + Sbjct: 168 GRDVRLALAELRAGLDDIASLSSVHSGRLTIGTLPLARAALLPQALSRFYAVAPGAEIVV 227 Query: 129 MEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARSIK 188 +EG + ++ L+ GE+D I + L E I R GHP G + Sbjct: 228 LEGPYLEHLSALQGGEIDVIIGALRSTEALSDIRQVSLFEDDLYIVGRKGHPLDGQPVVD 287 Query: 189 QLL-DYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 L Y W + P G+ + E L P V C + L+ D+L+ Sbjct: 288 NALSSYPWVIGAP-GAPMRLYWERLFQNTPRPTQTVQCSSVLTTRGLLLAGDWLA 341 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 44/83 (53%) Query: 6 KIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAG 65 + + A EVAR G+I AS +N+SQP L++ I +LE + +LF R S G T T AG Sbjct: 8 NLRHLEAAAEVARLGAISRASAAVNLSQPTLTQGIAKLELQIGHRLFNRESGGCTPTSAG 67 Query: 66 ESFYQHASLILEELRAAQEDIRQ 88 + F + L + IR+ Sbjct: 68 QLFIPRVNRALTRIEECCSHIRK 90 >UniRef50_B2Q0Q6 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q0Q6_PROST Length = 295 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/282 (24%), Positives = 133/282 (47%), Gaps = 7/282 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I +R FVEV + A+ L ++QPA+S+SIQ+LE+ L L R + GV LTD Sbjct: 1 MDIRSLRYFVEVVQLNGFSRAAERLFVTQPAISRSIQKLEQELGYTLLVRENDGVRLTDE 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE HA IL++ + + +++++G L+G +N+G+ I+ + +I F +++PQV Sbjct: 61 GEILLSHAKQILKQFNSMNKALKEKEGPLSGILNVGLPPVIASTYFADIIMAFSRRYPQV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHE-FTFEKLLEKQFAIFCRPGHPAIG 183 +++I+E M+ + GE++ P+D+E F + + HP Sbjct: 121 ELKILELGTHKMMEAMLNGEVE---TAAVMLPFDNELFDLHVFSSDRLMLLVSEQHPLAM 177 Query: 184 ARSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 S+K +L+D + + + + + P + ++V + Sbjct: 178 RNSVKFAELIDEPFIFFSEDFRINELVMSACGIYGKKPVIAGRSSHLDLVTAMVRAGVGV 237 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQT 283 + LP+ M + GL ++PV E + L ++S Q+ Sbjct: 238 TLLPDSM-WNKTRADGLSIIPVIEPVLSYEVALATLKNSHQS 278 >UniRef50_A3K882 Transcriptional regulator, LysR family, putative n=1 Tax=Sagittula stellata E-37 RepID=A3K882_9RHOB Length = 326 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 4/245 (1%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 +K+ + V +A G+ A+ LNM+Q SK ++++EE AA LF R +G+ LT Sbjct: 27 NLKVRHLSLIVALADHGTTHSAADALNMTQSTASKMLRDVEEIFAASLFERSPRGMVLTP 86 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 G+ +A L L+ E+ R+ G + IG + L+ ++ + PQ Sbjct: 87 LGQFAVDNARAQLSRLQRFSEEFSARRAGGYGTLAIGAITGAAPDLVARAVAEIKARRPQ 146 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP-AI 182 + V + +++EL G LD + + + FTFE L E++ + R GH A Sbjct: 147 LAVALHGETSDGILSELEAGRLDLAVGRFSAERHRTVFTFEPLAEERLVVVARAGHRLAS 206 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQA--QTPQVGVVCETFSACISLVAKSDF 240 G R + L D +W + P + +Q+ + D+A + P+ + C + ++LV +SD Sbjct: 207 GTRRLDDLQDCAWAL-QPKSNPSRQVLDAAFDRAALRRPRDTIECSSILLILNLVQESDA 265 Query: 241 LSKLP 245 ++ LP Sbjct: 266 VALLP 270 >UniRef50_D0I933 Putative transcriptional regulatory protein LysR-family n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I933_VIBHO Length = 307 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 51/176 (28%), Positives = 93/176 (52%) Query: 7 IHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGE 66 + QIR F+ A G + A+ +++SQ A++ ++++LEE L LF R+ G+ LT G Sbjct: 5 MKQIRYFIATADSGQVSQAANAMHVSQSAITTAVKQLEEMLNVSLFVRQPHGMLLTYEGN 64 Query: 67 SFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKV 126 FYQHA+ I++EL A +R Q++G I + M +++ +P ++RF + +P V V Sbjct: 65 QFYQHATHIVKELEEAMLLSHRRANQVSGTITLAMSYTLAGYFVPPYLTRFQRSYPNVNV 124 Query: 127 RIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 +++E ++ + GE D + +F+ LL Q ++ HP + Sbjct: 125 KLVEATRSNIEEGVVSGEFDVAFMLTSNLLNQEDISFQTLLSSQRRLWLSSSHPLL 180 >UniRef50_B7X3R9 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X3R9_COMTE Length = 296 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 78/281 (27%), Positives = 136/281 (48%), Gaps = 22/281 (7%) Query: 7 IHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGE 66 I ++AFV VA S + A+ +L++SQPALS+ +++LE+ L+ +L R ++ V L G Sbjct: 5 IADLKAFVAVAELASFKRAAELLHISQPALSRRVEKLEQALSLKLLERTTRKVELNAMGR 64 Query: 67 SFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKV 126 F A +L EL A+ + + +L G + I S+ +++ + I + +Q P++++ Sbjct: 65 VFLPRAQHVLAELEASLIGMTELNERLHGLVTIACIPSVVDTVVASAIHQIKKQFPRIRL 124 Query: 127 RIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARS 186 RI++ ++ + + E+DF I Y G + + FE+L + F + CR HP S Sbjct: 125 RILDQPAADILLTVARSEVDFGIG--YLGASEPDLDFEELASESFVLACRKDHPLATRSS 182 Query: 187 IKQLLDYSWTMPTPHGSYYKQL----SELLDDQAQTPQVG---VVCET--FSACISLVAK 237 I W+ H Q + LL DQA + V VCE + +SLV + Sbjct: 183 I------CWS-ELAHQDCVTQAQGSGNRLLIDQALSNTVTRPHWVCEVQHVPSLLSLVRR 235 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRR 278 + +P+ + G L +P+ E + LI RR Sbjct: 236 GVGVGAVPQH----AISGTDLCGIPLVEPQVLRSIGLISRR 272 >UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=Q122V6_POLSJ Length = 307 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 56/182 (30%), Positives = 93/182 (51%), Gaps = 2/182 (1%) Query: 7 IHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGE 66 + Q++ FV VA +GS R A+ +N+S PALS+ I +LE L A+LF R ++ V LT G Sbjct: 8 LQQLQGFVAVAERGSFRAAAEHINLSSPALSRRIDKLETILGARLFNRTTREVELTPLGR 67 Query: 67 SFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKV 126 F + A L++L +A I G++ + S + +P V+S F Q +P ++V Sbjct: 68 VFLERARTALDDLESAMLGIADIATHRGGRVTVACVPSAALYFLPTVVSNFSQHYPGIRV 127 Query: 127 RIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARS 186 R+++ + ++ + GE DF I + E FE + F + R HP +S Sbjct: 128 RVVDETMNQVLQSVLSGESDFGIG--FMNTLVPEIAFESIHNDPFVLAMRREHPLARHKS 185 Query: 187 IK 188 + Sbjct: 186 VN 187 >UniRef50_C1F7X5 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7X5_ACIC5 Length = 305 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 72/260 (27%), Positives = 120/260 (46%), Gaps = 5/260 (1%) Query: 6 KIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAG 65 ++ IRAF+ VA+ + A++ L++SQ AL+ IQ+LEE L +LF R + V LTDAG Sbjct: 4 ELRHIRAFLAVAQHANFTRAAQELHVSQSALTVQIQQLEEALGVKLFDRNKRRVALTDAG 63 Query: 66 ESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVK 125 I+ + A R+ G G +++ + S++ ++ +SRF HP + Sbjct: 64 REVIAPLQRIVVDAEAIVSRTREITGLRRGVLSMAVLPSMASGILSTALSRFTAAHPGIM 123 Query: 126 VRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP--AIG 183 + I + +I ++++ E+DF + T D E T L + F HP + Sbjct: 124 IHIHDVVADQVIEKVKKEEVDFGVATVMHA--DKELTLMPLFTDRLFAFLPEQHPLSSRA 181 Query: 184 ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSK 243 + S++Q+ DY + S + + L D T S +SLV + Sbjct: 182 SVSLQQISDYPLVLMARGTSVRSMVDQALRDHGLTATAAYEANYMSTALSLVRAGFGIGI 241 Query: 244 LPEEMGCDPLHGQGLVMLPV 263 LPE+ G Q LV LP+ Sbjct: 242 LPEDAGTMG-SAQNLVALPI 260 >UniRef50_C9NWS4 LysR family transcriptional regulator n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NWS4_9VIBR Length = 295 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 123/289 (42%), Gaps = 9/289 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + I+ +V GSI A+ L MSQP LSK I LE+ L +LFFR S G+ TD Sbjct: 2 LDVSDIKLLQKVTELGSINKAADELYMSQPTLSKRISRLEQTLNVKLFFRHSSGMQPTDV 61 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 ++ L+ +L + + + G++NIG+G I + P V+ F +Q QV Sbjct: 62 TNYLIKNGQLVQAKLDSMCRHVERLASLEGGKLNIGVGPIIEQLYFPKVLLDFVEQTSQV 121 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 K + ++ G LD + + +E + RP HP Sbjct: 122 KTLLKTANASELLTMTMDGHLDVAVGPFNIDDLPNELISAPVQGAPIVFVARPEHPLFSD 181 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + + +L Y P + L Q + V + C+ ++ SLV SDF++ Sbjct: 182 KKLNWDKLKQYPVIAPDAGNT----LKSYHSSQFNSDFVQITCDNYTTSKSLVKTSDFIT 237 Query: 243 KLPEEMGCDPLHGQGLVMLPV-SEILPKAAYYLIQRRDSRQTPLTASLI 290 P + + Q L +P+ S I ++++ I RR++ TP I Sbjct: 238 AGPRLLFSREIQEQQLAEIPLESNIYWQSSW--IARREAVYTPTVNKFI 284 >UniRef50_D2QVQ4 Transcriptional regulator, LysR family n=22 Tax=Bacteroidetes RepID=D2QVQ4_9SPHI Length = 298 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 58/191 (30%), Positives = 101/191 (52%), Gaps = 6/191 (3%) Query: 9 QIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESF 68 ++ F VAR+ S A+ L ++QPA++K IQELE L LF RR ++LT AG Sbjct: 5 RLTVFYTVARRLSFTKAAAELFVTQPAITKHIQELESQLGTALFDRRGNQISLTTAGNVL 64 Query: 69 YQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRI 128 +HA I+ R + D+ + +G+ G++ +G ++I++ ++PAV++RF +Q P V + + Sbjct: 65 LRHAETIMGVYRQIEFDLNELKGKPGGRLRLGASSTIAQYVIPAVLARFGEQFPDVTLSL 124 Query: 129 MEGQLVSMINELRQGELDFTINTYYQGPYDH-EFTFEKLLEKQFAIFCRPGHPAIGARSI 187 + G + L E+D + +G H + + ++ + + CR HP G I Sbjct: 125 LSGNTEQIEQALLHDEIDLGL---VEGRTHHSDVRYTPFVKDELVLVCRADHPLAGRDEI 181 Query: 188 KQLLDYSWTMP 198 LD T+P Sbjct: 182 T--LDELKTVP 190 >UniRef50_C0WJJ1 LysR family transcriptional regulator n=4 Tax=Corynebacterium RepID=C0WJJ1_9CORY Length = 311 Score = 97.1 bits (240), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 16/298 (5%) Query: 9 QIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESF 68 Q+ F V GS A+ L M+QP+LS SI++LE+ L QL R GVT T+AG+ Sbjct: 9 QLLYFRAVVDNGSFTHAAAALEMTQPSLSLSIRKLEKELNTQLLSRGRSGVTTTEAGDYV 68 Query: 69 YQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRI 128 Y A + L AQ I + G A +++ ++ P+V+S + HP ++ + Sbjct: 69 YDTALKVDALLADAQRHISEITGDNANTVSLTSCPILNWEFTPSVLSELTEIHPSARISL 128 Query: 129 MEGQLVSMINELRQGELDFTI-----NTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 + + I L +G++D + + Y E T + E +++ + Sbjct: 129 DDSTAATAIKRLLEGQVDLALLPTSDPKAFIRRYSPELTIHDVAEFDYSLAVPEAMADLP 188 Query: 184 AR-SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-----PQVGVVCETFSACISLVAK 237 + S++ L + +W +P PH ++EL DD + P + A I +++ Sbjct: 189 SPVSLQDLREETWLVP-PHCRELPGMAELYDDLWENHPSYKPDHIQDVASLHAAIPMISS 247 Query: 238 SDFLSKLPEEMGCDP-LHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 +S +P C P LH QG+ L V E LP+ L R D TP L+ R Sbjct: 248 GFGISFMPR---CAPALHPQGIAKLTVKEDLPRFHAILAYRSDRELTPAAQELVDILR 302 >UniRef50_D0J615 Transcriptional regulator, LysR family n=2 Tax=Comamonas testosteroni RepID=D0J615_COMTE Length = 306 Score = 97.1 bits (240), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 61/199 (30%), Positives = 105/199 (52%), Gaps = 14/199 (7%) Query: 9 QIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESF 68 +RA V +++ S A+ ++++SQ ALS I +E + A+LF R ++ V LTDAG F Sbjct: 10 DLRAVVALSQTKSFGQAALLVHLSQSALSALIARVEAQIGARLFERTTRAVELTDAGHVF 69 Query: 69 YQHASLILEE----LRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 HA IL + LRA + ++ R G + + S++ SL+P V + F + HP V Sbjct: 70 IAHAQEILRDTQRALRAVTDTVQLRT----GSVTVAALPSLAASLLPKVFAEFTRIHPGV 125 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA--- 181 ++ +++ + +R G++DF + P + +E+L+E QF + C HP Sbjct: 126 RLSLLDTLSGPAFDLVRDGKVDFALTA--ADPKQEDLAYEQLMEDQFFLICPDDHPLSKH 183 Query: 182 IGARSIKQLLDYSW-TMPT 199 G +I+ LDY +MP+ Sbjct: 184 AGPVAIENTLDYPHVSMPS 202 >UniRef50_A9I9V5 Transcriptional regulator, LysR-family n=1 Tax=Bordetella petrii DSM 12804 RepID=A9I9V5_BORPD Length = 337 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 75/243 (30%), Positives = 119/243 (48%), Gaps = 7/243 (2%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 +A + + +R F+ VA GSI A++M +M+QPALS I++LEE L LF R KGV Sbjct: 14 VAMSIDLRDLRHFLSVAAAGSISRAAQMQHMTQPALSVLIKQLEEQLGTPLFERLPKGVA 73 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LTDAGE HA IL A E+I Q+ GQ+ +G+ S++R L V+S + Sbjct: 74 LTDAGERLRAHAKDILLRTELAYEEISQQARVPNGQVAVGLPQSLARFLTVPVVSDVLSR 133 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTF---EKLLEKQFAIFCRP 177 PQ++++++E + L++G++D + D +T E+L+ A R Sbjct: 134 WPQIRLQVIELSSGYIPEHLQKGDIDVGMTFAQDERRDLNYTHLIDEELVFISSASQIRR 193 Query: 178 GHPAIGARS----IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACIS 233 A G R + ++ D+ +P+ S +L + L Q + T S I Sbjct: 194 HLGAAGLRRKTIHLSEMGDFPMILPSRTHSLRVRLEDYLQRAGQRLTIAAEVNTTSQLIG 253 Query: 234 LVA 236 L A Sbjct: 254 LAA 256 >UniRef50_C4DFU1 Transcriptional regulator, COG0583 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DFU1_9ACTO Length = 309 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 6/242 (2%) Query: 8 HQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGES 67 +++R FV VAR+GS+ A+ L+ +QP++S + LEE + A L R +G+ LT+AG Sbjct: 5 NRLRVFVAVAREGSVTAAAAKLHYAQPSVSHHLARLEEEIGAPLVSRLGRGIRLTEAGRL 64 Query: 68 FYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVR 127 F + A IL + AA+ ++ G + G + + + +L+P+ F +P V V Sbjct: 65 FAERAEEILGRIDAARTELASHAGLVNGHVRLAAFPTALAALVPSAAGAFADAYPGVDVD 124 Query: 128 IMEGQLVSMINELRQGELDFTINTYYQG--PYDHE-FTFEKLLEKQFAIFCRPGHPAIGA 184 + E + I LR+GE+D + +Y P D E + L ++ + PG G Sbjct: 125 LTEAEPPQAIAALRRGEVDICLAFHYGATPPADWEALSVAPLFDEPVYLVTSPGSSPSGP 184 Query: 185 RS-IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSK 243 R + D W L + TP V + + A +LVA+ +S Sbjct: 185 RDELASYADRRWIAGC--AQCRAHLLSACEASGFTPSVAFETDDYVAVQALVAQGMGVST 242 Query: 244 LP 245 LP Sbjct: 243 LP 244 >UniRef50_C1B6M2 Putative LysR family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1B6M2_RHOOB Length = 303 Score = 96.7 bits (239), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 77/274 (28%), Positives = 130/274 (47%), Gaps = 18/274 (6%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++I Q++A V VA GS+ A+++L++ QPA+++ I LE+ L QLF R G+ LT+ Sbjct: 1 MEIRQLKALVAVADTGSVTRAAQVLHLVQPAVTRHIATLEDELGTQLFERSRAGMLLTEV 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE + A L E+ A+E ++G +++G+ S++R + P + QHP + Sbjct: 61 GEQVLERARRALREIERAKEVASTSDHSVSGHVSVGLLPSVARVIGPRLSDAIVSQHPGL 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGH-PAIG 183 ++++ G + L G +DF I + P F+ + + + PG G Sbjct: 121 QLQLTVGYAGHLAKWLEGGAVDFAI--LFDQPMSSAFSMDPVAIEDLWAIAPPGSLEDTG 178 Query: 184 AR-SIKQLLDYSWTMPT-PHGSYYKQLSELLDDQAQ----TPQVGVVCETFSACI--SLV 235 A ++ +L +P PHG L L+D A TP V ET A + +LV Sbjct: 179 APIPLEHVLSQPMIIPNPPHG-----LRTLIDVAAARLGITPS--VTLETNDATLQRALV 231 Query: 236 AKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPK 269 A S LP M HG ++ +P + L + Sbjct: 232 ADKLGWSMLPASMATAGAHGDEVIAVPTTPSLTR 265 >UniRef50_B7RV59 LysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RV59_9GAMM Length = 292 Score = 96.7 bits (239), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 53/171 (30%), Positives = 92/171 (53%), Gaps = 2/171 (1%) Query: 10 IRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFY 69 +RAFV VAR GS A+ L+ SQPA++ SI++LE + +LF R ++ VT T AGE F Sbjct: 1 MRAFVVVARHGSFNRAADELSRSQPAVTLSIKQLESYVGLKLFERTTRKVTPTTAGEKFI 60 Query: 70 QHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIM 129 A +L E A D+ +G +++ + S++ ++P VIS F ++ P + + + Sbjct: 61 PVAERLLREFDMAIYDVTATADCRSGHVSMSVLPSVATRILPDVISEFTEKFPDISIHVS 120 Query: 130 EGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 + + + + E+DF I + + + + F L+E +F + C HP Sbjct: 121 DYNAQGVQRSVERNEVDFGIGSLWHP--NSKLEFRPLMEDRFELVCHKDHP 169 >UniRef50_Q7W5Y3 LysR-type transcriptional regulator n=3 Tax=Bordetella RepID=Q7W5Y3_BORPA Length = 329 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 9/283 (3%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++I +R V + GS+R A+ L++S+PA S+ ++E+E LF R +G+ Sbjct: 11 HIRIKHLRLLELVVQYGSLRKAAEGLHLSEPAASQMLREVESTFGVTLFERGRRGMRPNP 70 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 + +IL EL Q D+ + + + I++G +L+P + R + Sbjct: 71 FADVLVGRVRVILRELHEMQADVAELEHRQGVSIDLGALPRCLHTLVPTTLVRLFGAGFR 130 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYD----HEFTFEKLLEKQFAIFCRPGH 179 +VRI EG +++ L QG +D + + F L E+ AI C H Sbjct: 131 SRVRIAEGTSRQLLDALDQGAIDIAVTRLLESHAGLAGARNFDSAVLYEEAIAIVCSTDH 190 Query: 180 P--AIGARSIKQLLDYSWTMPTPHGSYYKQL--SELLDDQAQTPQVGVVCETFSACISLV 235 P A+ ++ L Y W +P P S +L E + + P V T ++ ++LV Sbjct: 191 PLSAVDTVTLDMLTQYDWVLP-PSTSITGKLIEEEFVSAGLRPPVPKVEWLTSASRLTLV 249 Query: 236 AKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRR 278 KS+FL P + + G L +LPV+ +P ++ RR Sbjct: 250 QKSNFLGICPASVAAELQQGGRLHVLPVNPRVPLPPISVVWRR 292 >UniRef50_B6R3G2 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R3G2_9RHOB Length = 310 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 62/219 (28%), Positives = 109/219 (49%), Gaps = 6/219 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + IHQ++ FV VAR+GSI AS +L SQPA+S I+ +EE L LF R +G+ +T Sbjct: 1 MDIHQLKTFVTVAREGSITKASELLFRSQPAVSAHIKNMEETLGLTLFQRTPRGMAVTPD 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ A +L+ + E+ + +G LAGQ+++G G + S ++ +++ Q+ P+V Sbjct: 61 GQRLLNEAHQLLDRHQKFLEEASRLRGSLAGQLSLGAGRNSSTGVVSNLLAAMSQEFPEV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIF-CRPGH--PA 181 +V + V ++ +R G LD +Y + + L F ++ P + P Sbjct: 121 EVELQHRASVKVLEGIRNGSLDA---GFYTETGEDDSDLSTLEISNFCVYLAAPANLVPV 177 Query: 182 IGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQ 220 + K L D W P+ + + +LL+ P+ Sbjct: 178 ASEFNWKALEDVPWIYPSCNSCCGRLARDLLETHGIRPK 216 >UniRef50_B6A4Z6 Transcriptional regulator, LysR family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B6A4Z6_RHILW Length = 299 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 2/229 (0%) Query: 13 FVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHA 72 F+ + ++ AS ++QPAL+KS++ LE+ + + LF R G+ T+AG++ Y+HA Sbjct: 12 FLAIYEARNMHRASGSKGITQPALTKSLKTLEDDIGSALFVRTPWGLEPTEAGQTLYRHA 71 Query: 73 SLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQ 132 I +E R A ++ G+I IG+G ++ S P ++ F ++ P V+V G Sbjct: 72 CTIDQEARFASLNMNNVLAGRGGKIRIGVGPGLAVSSFPKILVDFRRRFPGVQVIAQTGL 131 Query: 133 LVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARSIK--QL 190 ++ EL + LD F+ L Q A R GHP + R+++ L Sbjct: 132 TSQLVEELLRDTLDVIATARPPRDLPEHFSRSPLFPIQMAAIARRGHPLLAPRTVRGEDL 191 Query: 191 LDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 +Y + KQ +L A V V + S + +VA +D Sbjct: 192 FEYGCVTFQESEDFVKQTRQLFGAAADKLNVVVETNSISVMLDMVASTD 240 >UniRef50_B1M1C3 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M1C3_METRJ Length = 315 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 79/296 (26%), Positives = 137/296 (46%), Gaps = 23/296 (7%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 ++ + ++AFV +A GS R AS L ++Q AL++ IQ+LE L A L R ++ V L+ Sbjct: 1 MKLPVDGVQAFVLIAELGSYRRASESLGLTQTALTRRIQKLEGFLGAMLLDRTTRTVRLS 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 G F A+ ++ + E +R G + + SI+ MPAV+ + + HP Sbjct: 61 AVGREFLPLATRLIADFTQGIERLRTTSRLGVGDVTVATVQSIAFRRMPAVLQAYARDHP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 Q +V+I+E + +R+GE DF I + Q D + ++L+ F + C HP Sbjct: 121 QNRVQILERSGALVTEAVRKGEADFGI--HIQQEADADLLEDRLVRDPFVLICHRSHPLA 178 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT----------PQVGVVCETFSACI 232 G R ++ WT + G+ L ++A+ P+ V E+ + Sbjct: 179 GRRELR------WTELS--GTDLVTLGGASGNRARVEAQLAAADLPPRGRFVVESTPTAL 230 Query: 233 SLVAKSDFLSKLPEEM-GCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTA 287 +LV+ + LP + G P LV + ++E L++RR++ TP A Sbjct: 231 ALVSAGIGAAILPAALGGASPR--DDLVEVLLTEPAIYRTISLVRRRNTSLTPAAA 284 >UniRef50_B1J741 Transcriptional regulator, LysR family n=4 Tax=Pseudomonadaceae RepID=B1J741_PSEPW Length = 397 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 82/298 (27%), Positives = 135/298 (45%), Gaps = 12/298 (4%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 FQ + +++ FV++ ++ +R +SQPA+S +++ LE G LF R S+G+ T Sbjct: 99 FQAR--RLQVFVKLCETRHMQTVARHFGLSQPAVSAALKVLEGGCGQPLFVRTSRGLQPT 156 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRS-LMPAVISRFHQQH 121 A L ELR D+ QG L G +++G + RS ++P I RF QH Sbjct: 157 VASRDILFPIRRALNELRHLDSDLSAMQGTLRGVVHVG-ALPLGRSRILPEAILRFTAQH 215 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 QV+V E + ELR G++DF + Y + E L+ ++ + R GHP Sbjct: 216 LQVRVVTNESPFDLLATELRVGDVDFVLGALRPHDYASDLVGEPLINEEMVLLARRGHPL 275 Query: 182 IGA-RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACI--SLVAKS 238 + ++K + W +P GS + L + A P V E+ + L+ +S Sbjct: 276 LHTPLTLKGVHQARWVLPRA-GSPARGLLDNCFAAAGLPAPWPVVESADLAVIRGLLVRS 334 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYY--LIQRRDSRQTPLTASLITQFR 294 D L+ + + L LP+ +LP A L+QR Q+P +L+ R Sbjct: 335 DMLAAVSAHQLAYEIASGELQRLPL--VLPGTARAIGLMQRSGCLQSPAAVALMACIR 390 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 48/87 (55%) Query: 6 KIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAG 65 + Q+RAF+ VA GS+ A+++L +Q ++++I ELE A LF R + G+ LTD G Sbjct: 8 NLMQVRAFIRVAELGSVSRATQVLFRAQSVVTRAIAELEARFAVPLFERHANGMRLTDYG 67 Query: 66 ESFYQHASLILEELRAAQEDIRQRQGQ 92 E A +L EL + QG+ Sbjct: 68 ECLLPRAQRVLAELDGVPGLMGTAQGE 94 >UniRef50_Q0SIM5 Transcriptional regulator, LysR family protein n=3 Tax=Rhodococcus RepID=Q0SIM5_RHOSR Length = 306 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 62/226 (27%), Positives = 109/226 (48%), Gaps = 4/226 (1%) Query: 15 EVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHASL 74 EVA GSI A+ L + A+S+ I +LE+ L R ++G+ LT+AG S +H Sbjct: 12 EVAEHGSITAAAAALGYTTSAVSQQIAKLEKEAGQPLLERHARGIVLTEAGWSVVRHTER 71 Query: 75 ILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQLV 134 IL EL AA ++ + +G AG + IG + SL+P V+ F +HP V+++++ G+ Sbjct: 72 ILIELEAADAELAEIKGLRAGVLAIGTFPTAGSSLLPLVVKEFKTRHPGVELKVLSGRFA 131 Query: 135 SMINELRQGELDFTINTYYQGPY--DHEFTFEKLLEKQFAIFCRPGHPAIGARSIK--QL 190 +++ LR+ E + ++ Y+ D T+ ++ + H SI+ +L Sbjct: 132 YLVDALRRRETELSLLWDYEWNRVDDPTLTYHHVMNDPTVLLVSERHRLADRDSIRIAEL 191 Query: 191 LDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVA 236 D SW + + L +L TP+ V + ++VA Sbjct: 192 RDESWVVRADDHPVAQTLEKLCQQGGFTPRTSVFAHDYGEVQAMVA 237 >UniRef50_A9VQL8 Transcriptional regulator, LysR family n=8 Tax=Bacillus cereus group RepID=A9VQL8_BACWK Length = 291 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 66/243 (27%), Positives = 125/243 (51%), Gaps = 10/243 (4%) Query: 9 QIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESF 68 Q+ F E+ +QGSI A+ +L+++QP LS+ +++LE L L R + LT GE Sbjct: 5 QLYYFKEIVKQGSISKAAEVLHIAQPPLSQLLKKLETDLGTTLIHRYRQKWELTATGEIL 64 Query: 69 YQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRI 128 YQ+A+ +L +++ ++ I++ + + G ++IG+ ++ S L+ V S F Q+P VK++I Sbjct: 65 YQYANQMLMQIQDVKQKIQEIEQGIGGTVSIGVSSTCSNMLIDYV-STFRTQYPNVKIKI 123 Query: 129 MEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARS-- 186 + G ++ L Q E+D + +E K+L+KQ P A S Sbjct: 124 VTGNSEELLKRLEQREIDVALLLRLGNSEQYEM---KILKKQPTAVIIPSSWATSFSSQY 180 Query: 187 --IKQLLDYSWTM--PTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 I+Q+ + + M S+ + L ++ D+ P + + C+ ++LV++ LS Sbjct: 181 VTIEQIAQFPFIMLGAMEGLSFNEDLFKVFDEHQVKPNIIIECKDIRMVVALVSRGLGLS 240 Query: 243 KLP 245 +P Sbjct: 241 VIP 243 >UniRef50_UPI0001C3125C transcriptional regulator, LysR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3125C Length = 315 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 18/263 (6%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + ++R EVA GS A+ L ++Q A+S+ + LE + +L R ++ V LT+A Sbjct: 2 IDVRRLRVLREVAVHGSFSAAAHALTLTQSAVSQHVATLEREVGQRLVERGTRPVELTEA 61 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + +HA+ I L A++++ + G+ G++ G + +LMP RF + HP V Sbjct: 62 GYALTRHATGIFARLDDAEQELAEIAGRRHGRLRFGTFPTALATLMPPAFERFGRTHPDV 121 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFE---------KLLEKQFAIFC 175 + +++ L ++ L GELD + YDHE E L + F Sbjct: 122 TLTVVDDHLQRLVPRLETGELDLALI------YDHEALPEISARDLERMPLADDPFQAVL 175 Query: 176 RPGHPAIGARSIKQLLDYS---WTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACI 232 GH R +L D S W +P+ ++Y+ + TP + + + A Sbjct: 176 PAGHRLARRRRPLELSDLSGEPWIGGSPNSAWYRITAHACRLAGFTPHASLASDDYIAVQ 235 Query: 233 SLVAKSDFLSKLPEEMGCDPLHG 255 +LVA +S +P PL G Sbjct: 236 ALVAAGLGVSLIPGLAVAHPLPG 258 >UniRef50_B8G0C5 Transcriptional regulator, LysR family n=2 Tax=Desulfitobacterium hafniense RepID=B8G0C5_DESHD Length = 304 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 68/268 (25%), Positives = 128/268 (47%), Gaps = 16/268 (5%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+ VEVA+ SI A+ + ++QPA+S SI +LE+ L LF R +KG TD Sbjct: 1 MRLEQLYHLVEVAKYNSISIAAERIYITQPAVSASISKLEDELGVLLFKRTTKGAYPTDI 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++ + A IL+++ +E LAG + I S+ +MP V+S + HP + Sbjct: 61 GQTIIEAAEEILQKVDFIKE--LANTSALAGNVTIATIPSMCDKIMPHVLSFLKEAHPGI 118 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 V + G+ + ++N ++ G D I + + FEKL +F I+ P Sbjct: 119 SVSLHVGESIQVLNHIQSGTADIGIVIMTEEIQEKNIYFEKLFHDEFLIYVGKNSPLANK 178 Query: 185 RSI--KQLLDYSWTMPTPHGSYYKQLSE------LLDDQAQTPQVGVVCETFSACISLVA 236 +S+ ++ L+Y P +Y + S L + +P++ + F V+ Sbjct: 179 QSVTLQEALEY------PVVAYNDEFSRNNGGITSLLKKYSSPKISFRFDNFEMIKRTVS 232 Query: 237 KSDFLSKLPEEMGCDPLHGQGLVMLPVS 264 + F+S P+ M + ++ ++P++ Sbjct: 233 QGTFISFFPKFMSKNDVYQLSHEIVPIA 260 >UniRef50_Q92Y80 Transcriptional regulator, LysR family n=2 Tax=Rhizobiaceae RepID=Q92Y80_RHIME Length = 383 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 68/263 (25%), Positives = 123/263 (46%), Gaps = 32/263 (12%) Query: 7 IHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGE 66 + IR F+ VA+Q S A+R L+M+ P +++S+ LE+ L QL R ++ V+LT AG Sbjct: 4 LSDIRVFLAVAQQRSFTAAARQLSMTPPTVTRSVSALEQSLGVQLLLRTTRQVSLTSAGA 63 Query: 67 SFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKV 126 + ++ + ++D+R+ QG +AG I I S+ + L+P ++S F +HPQV V Sbjct: 64 VYAARVEPLIRQFDQVRDDLREEQGDVAGLIRINAPLSLGQQLLPDIVSGFRAEHPQVSV 123 Query: 127 RI-MEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGAR 185 + + + + +++E D + + P D + K+ + + PG+ AI Sbjct: 124 SLSLTDRFIDIVSE----RFDLALRV-SEAPRDRSTIWRKVCRVRRILVASPGYLAIFG- 177 Query: 186 SIKQLLDYSWTMPTP-----HGSY-YKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 T TP HG Y + E + + + G + + + + Sbjct: 178 ----------TPETPDDLSRHGCIAYDE--EAISETWELTNGGRTRKALAGKVLAANNGE 225 Query: 240 FLSKLPEEMGCDPLHGQGLVMLP 262 ++KL E+ GQGL +LP Sbjct: 226 LIAKLVED-------GQGLALLP 241 >UniRef50_C3JP42 Transcriptional regulator, LysR family n=4 Tax=Actinomycetales RepID=C3JP42_RHOER Length = 308 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/251 (24%), Positives = 114/251 (45%), Gaps = 4/251 (1%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++K+ + ++RQGS+ GA+ L+++QP ++S+ ++E L LF R +G+T T Sbjct: 10 RLKLRHLLLVDALSRQGSVVGAAAALHITQPVATRSLHDIESILGVSLFDRGPRGITPTI 69 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 GE+F HA ++ +L A + + G + +G + S L+P I+R HP Sbjct: 70 FGEAFTTHARAVIAQLTEAGRHVVELADANRGTVIVGTHLAGSNVLLPGAIARLKVHHPL 129 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 + V + EG ++ +L G +D + P D T L + + R HP Sbjct: 130 LTVVVREGTPEQLLTDLEAGRIDLIVG-RLTSPTDDTATRRNLYAESVELVTRVDHPLAH 188 Query: 184 ARSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLVAKSDF 240 + ++L + W +P ++L E P+ V +F L+ ++D Sbjct: 189 REDVQLEELRGFPWILPGVETVLRRELEEFFARNGLPLPENRVEATSFLTVRQLLVETDM 248 Query: 241 LSKLPEEMGCD 251 ++ LP + D Sbjct: 249 IAVLPSLIPRD 259 >UniRef50_Q7WC04 Regulatory protein n=2 Tax=Bordetella RepID=Q7WC04_BORPA Length = 309 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 75/277 (27%), Positives = 132/277 (47%), Gaps = 21/277 (7%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 +A +++ + + +AR+GS+R A++ ++++QPALS+ ++E+E L QLF R S+G++ Sbjct: 11 LASRLRFRHFQLLLTLAREGSLRAAAQEMHVTQPALSRMLEEIEGVLGVQLFVRTSRGLS 70 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 T G + + A ILEEL ++I Q+A I +G ++ S+M VISR Sbjct: 71 PTGHGIAATRSARQILEELGRVPQEI-NLGPQVAALIRVGAPHFVAHSVMSRVISRLAAL 129 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTF-----EKLLEKQFAIFC 175 P+V V+++E + + L++G+ D + TY P E EKL E + + Sbjct: 130 RPRVHVQLIERPVPELFAALQEGDADALVTTY--APQHIEAAKMPLHQEKLYESNYQLVA 187 Query: 176 RPGHPAIGAR---SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVV-CETFSAC 231 P H +R + +L++ W +P K++ + P V VV + Sbjct: 188 PPDHRFAKSRRPVPLAKLVNEDWILPAQDSMLRKEIDWVFRRAGLLPPVPVVEANNSTTS 247 Query: 232 ISLVAKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILP 268 I LV +G HG+ L +P + P Sbjct: 248 IQLVVAG---------IGLGFAHGETLQNVPPGTVAP 275 >UniRef50_A3VB04 Transcriptional regulator, LysR family protein n=2 Tax=unclassified Rhodobacterales RepID=A3VB04_9RHOB Length = 412 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 70/261 (26%), Positives = 125/261 (47%), Gaps = 10/261 (3%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 +V Q+RA + + G+ A+R L +SQP++ ++ ++LE+ +LF +G+ LT Sbjct: 103 LRVTAAQLRALIAIRDAGNFSLAARTLGISQPSIHRAGRDLEKLSGMELFSAGRRGIELT 162 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRS-LMPAVISRFHQQH 121 E+F + L EL +D+ + G+ + +I +G +SR+ ++P I Sbjct: 163 PQAEAFARSVKLAEAELNQGLDDLTRLAGRDSTRITVG-SMPLSRTRILPEAIDALLAGS 221 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 V++R ++ ++ LR G++D I + E L E + ++ P HP Sbjct: 222 AGVQIRTIDAPYAELLRGLRYGDIDVLIGALRDPVPVDDVVQEPLFEDRLSVVAGPNHPL 281 Query: 182 IGARS--IKQLLDYSWTMP---TPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVA 236 G R+ I L Y W P TP GSY + ++ D Q +TP V +V + L+A Sbjct: 282 AGRRNIGISDTLAYPWIAPPKETPGGSYLFRTLQIGDMQ-ETP-VRIVSSSMVLVRGLLA 339 Query: 237 KSDFLSKL-PEEMGCDPLHGQ 256 + D+L+ L P + + HG Sbjct: 340 RGDYLTILSPHQAEVEIAHGD 360 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 40/64 (62%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + +RAF+EVA I A+ +++SQPA++++I LE L +L RR++G+ T A Sbjct: 6 LNLRHLRAFMEVADAHGISAAAHKVHLSQPAVTQAISGLEARLGTKLLDRRTEGMFPTKA 65 Query: 65 GESF 68 G + Sbjct: 66 GGAL 69 >UniRef50_Q15NZ1 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=Q15NZ1_PSEA6 Length = 414 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 5/212 (2%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 + V ++ AF+ + ++ A+ LN+++ A+ S+++LE L LF +GV Sbjct: 110 SMDVSYKRLAAFISLYHCKNVHSAADQLNVTKAAIYSSVRQLEVWLGIFLFESEPQGVVP 169 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T QH L E+R A ED+ G +G + IG L P I+ +H Sbjct: 170 TPYCNVLAQHLKLAFSEIRYALEDLANLDGVTSGSVKIGTLPYTRTYLTPQAINLLLDEH 229 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 + V EG + LR G++DF I D + E LLE + ++ R HP Sbjct: 230 HNLDVSTREGPYNLLEVSLRNGDIDFIIGAIRPSEKDSDLNTEILLEDKLSVIARSNHPL 289 Query: 182 IGAR--SIKQLLDYSWTMP---TPHGSYYKQL 208 +G S+ L DY W +P TP G + +L Sbjct: 290 MGRENLSLGDLSDYGWVLPELHTPSGRLFLEL 321 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 1/116 (0%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++ + Q+R F+ V + S+ A+ LN SQ A++KSI +LE+ L LF R + G+ Sbjct: 11 ELSLRQLRFFMSVYKLKSVTKAANELNRSQTAITKSITDLEKSLNVSLFDRVATGMIANA 70 Query: 64 AGESFYQHASLILEEL-RAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFH 118 GE+F ++E +A+Q + + + N +S + A IS +H Sbjct: 71 YGEAFATRTQRAIDEFQKASQSFASYSKLHMNSENNPIFSMDVSYKRLAAFISLYH 126 >UniRef50_Q1QWP9 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QWP9_CHRSD Length = 317 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 8/297 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ + +A ++ +R++++SQPA SK +++LE LF R + + T+ Sbjct: 15 LRFKHLTLLTTLAESRNMHATARVMHLSQPAASKMLRDLEVYFGFALFERLPRAMQPTEL 74 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE +HA ++L ++ +DI + GQ+ IG A+ + ++PA I+R Q P++ Sbjct: 75 GEQVIRHAWILLNDMERLVDDINDLREGGYGQLLIGAIAAAAPEILPAAIARLKQARPRL 134 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI-- 182 V + E ++ EL LD I + F FE LL++ + R HP Sbjct: 135 SVSLQEQTSDRLLLELEHKRLDLVIGRLTHVSQHNLFDFEPLLDEPLRVVVRRDHPLTRR 194 Query: 183 -GARSIKQLLDYSWT---MPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 A S+ +L + W + +P ++ S L ++ TP V + A + L+ S Sbjct: 195 GEAPSLDELSHWPWILHPLSSPMRGVFE--SALAEEGIATPANVVETTSIQATLQLLQSS 252 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 D L+ LP + PL G V+L P Y +I RR +P L+ RR Sbjct: 253 DMLAVLPRSVMRRPLAGGQYVVLERVIGKPLDYYGIITRRQEPLSPAVEELVVHLRR 309 >UniRef50_Q2T4S2 Transcriptional regulator, LysR family, putative n=41 Tax=Proteobacteria RepID=Q2T4S2_BURTA Length = 331 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 83/298 (27%), Positives = 137/298 (45%), Gaps = 11/298 (3%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++K Q+ V +A +G+I A+ LNM+QPA SK ++ELE+ + A LF R +G+ T Sbjct: 27 RLKTRQLLLIVALADEGNIHRAAAALNMTQPAASKLLRELEDTIGAMLFERMPRGMRPTL 86 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 G++ +HA L L AQ+++ + GQ+ IG S L+P ++ H Sbjct: 87 YGDALIRHARAALGSLDQAQDELAALKAGRLGQVAIGAITSPGLRLLPPAVAAVKATHAN 146 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V++ + ++ L Q +LD + +E L + A R GHP + Sbjct: 147 VRISVEIDTSNVLLERLAQDKLDVVVGRLSAEHDKLRLRYEPLTGEPVAAVVRAGHPLL- 205 Query: 184 ARSIKQLLDY---SWTMPTPHGSYYKQLSELLDDQAQ-TPQVGVVCETFSA--CISLVAK 237 R+ L D +W +P P GS + EL+ +A TP VV ET + ++ + Sbjct: 206 ERAPLALADVQRAAWVVP-PAGSVLRHRFELMFQRASLTPPANVV-ETAALLFVTRVLER 263 Query: 238 SDFLSKLPEEMG-CDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 SD ++ L E++ HG + MLP+ + +I R D P + I R Sbjct: 264 SDMVAVLAEDVARYYATHGI-VAMLPLEMDCRMDDFGIITRTDKVHAPAASVTIEAIR 320 >UniRef50_A5G2D8 Transcriptional regulator, LysR family n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G2D8_ACICJ Length = 303 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 98/180 (54%), Gaps = 3/180 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+ FV +A + A+R +N+ Q ALS SI+ LE L A LF R ++ V LT A Sbjct: 1 MELRQLHHFVALAEERQFTRAARRVNIVQSALSTSIRALERELDAPLFVRSTRDVRLTGA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSL-MPAVISRFHQQHPQ 123 GE F + A L +E +R A+ + + QG G + IG S+ L +P +++RFHQ+HP Sbjct: 61 GEIFLEKARLAIEAVRDARSAVAEVQGLKRGTLKIGTVQSLPAFLDLPLLLARFHQRHPG 120 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 +++R+++G ++ + R G +D + G + + + + + C GHP G Sbjct: 121 IEIRLIQGSSSALADRTRAGGIDAAF--FPVGTHLTDLVTTMIACDEVVLACPRGHPLEG 178 >UniRef50_P52696 Uncharacterized HTH-type transcriptional regulator ybhD n=68 Tax=Proteobacteria RepID=YBHD_ECOLI Length = 317 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 98/188 (52%), Gaps = 6/188 (3%) Query: 6 KIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAG 65 ++ ++AFV +A S A+++LN++QPAL++ I+++EE L QLF R ++ VTLT AG Sbjct: 4 ELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHVQLFERTTRKVTLTKAG 63 Query: 66 ESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVK 125 + A ++++ +IR G + + + +P I +F++ +P +K Sbjct: 64 KRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKFNELYPNIK 123 Query: 126 VRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGAR 185 VRI+E + + + E DF IN + F L+ + F + CR HP Sbjct: 124 VRILEQGTNNCMESVLCNESDFGIN--MNNVTNSSIDFTPLVNEPFVLACRRDHPL---- 177 Query: 186 SIKQLLDY 193 + KQL+++ Sbjct: 178 AKKQLVEW 185 >UniRef50_B5JK93 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JK93_9BACT Length = 293 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/144 (34%), Positives = 86/144 (59%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R F+EVA + ++ A+ L++SQPALS+ +++LEE L L R +K V+LT+A Sbjct: 1 MELRHLRYFIEVALEENVTRAAEKLHVSQPALSRQVRDLEEELGFALLERSAKSVSLTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G F AS +LE L R +G+I++G S++ ++P I F ++P+V Sbjct: 61 GRVFLDEASAVLERLEVGVAAARAAAEDGSGEIHVGYAPSLTVKILPPTIRAFQAEYPKV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFT 148 KV++ + M++ LR G+LDF Sbjct: 121 KVKLYDMSTEEMLDGLRSGKLDFA 144 >UniRef50_B2JRL2 Transcriptional regulator, LysR family n=2 Tax=cellular organisms RepID=B2JRL2_BURP8 Length = 304 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 74/269 (27%), Positives = 122/269 (45%), Gaps = 19/269 (7%) Query: 10 IRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLF--FRRSKGVTLTDAGES 67 ++ F+ VAR GSIR A+ L+++ A+S+ IQ LEE L A+LF R K + LT AGE Sbjct: 7 LKYFIGVARSGSIRRAAEQLHVAASAISRQIQMLEEELNAELFERHRGQKSLRLTAAGEL 66 Query: 68 FYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVR 127 + LI EL + DIR G + +G S SR +P+ + RFH Q+P + Sbjct: 67 LLNYTRLIENELDQVRADIRAIDTLQKGTVRLGASESFSREFLPSFLHRFHSQYPGITFN 126 Query: 128 IMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFA--IFCRPGHPAIGAR 185 ++ G ++ L + E+D + Y+ P F + + E + HP R Sbjct: 127 VIVGGGGKLVELLAKDEIDVALA--YRAP--DAFDVQVIAETHVTPCLLVSATHPFANRR 182 Query: 186 S--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETF---------SACISL 234 S I++ + +P + + + P+ +V +F C ++ Sbjct: 183 SVDIEECGEIEIALPDESLTIRESYVRMFSKARIRPRTILVTNSFELMRAAAVSGLCNAI 242 Query: 235 VAKSDFLSKLPEEMGCDPLHGQGLVMLPV 263 V K K+P + PLHG+G+ P+ Sbjct: 243 VNKYFGNYKVPRGLRYVPLHGEGVERWPL 271 >UniRef50_D2P368 Transcription activator of glutamate synthase operon GltC n=18 Tax=Listeria RepID=D2P368_LISMO Length = 295 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 119/247 (48%), Gaps = 9/247 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q++ F+EVAR + AS L+++Q A+S+ I +LEE L LF R + + LT Sbjct: 1 MELRQLKYFMEVARVEHMTKASENLHVAQSAVSRQITKLEEELGVHLFDRVGRNMQLTSV 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F + A++ L EL+ A+ + + G + +G+ S+S ++P+VIS F +++PQ+ Sbjct: 61 GQDFLKQAAIALNELQKAEALVTEYTDPAKGTVRVGLPNSLSTKVLPSVISTFREKYPQI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPY---DHEFTFEKLLEKQFAIFCRPGHPA 181 + MEG + L G LD T + P + + +++ + HP Sbjct: 121 TYQFMEGTNEELTEMLLSGVLDMT----FLSPVPESSEQIEAIRFFDEKLKLIVPKTHPL 176 Query: 182 IG--ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 S+K+L + + YK +++ + + PQ+ F LV Sbjct: 177 AENFTVSLKELASEKFVLYPEDFDLYKIVTKAANKKGFEPQIAFQSRDFYTIQGLVGAGL 236 Query: 240 FLSKLPE 246 +S LPE Sbjct: 237 GISILPE 243 >UniRef50_A9BU39 Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BU39_DELAS Length = 298 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 82/296 (27%), Positives = 137/296 (46%), Gaps = 24/296 (8%) Query: 8 HQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGES 67 +++ F+ VA G A+ L ++QPA+SK ++ +E+G+ A LF R + GV LT +G+ Sbjct: 7 NELACFLAVAEHGHFGRAAAALQLTQPAVSKIVRRVEQGVGAALFTRGTHGVALTSSGQL 66 Query: 68 FYQHA-SLIL--EELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 F + A L+L EE A DI Q Q G I +G + S S ++ ++ P + Sbjct: 67 FMEPARQLVLRHEETMRAASDI---QAQHVGLIRLGFTQATSESRATRAVAELLRRRPGL 123 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLL--EKQFAIFCRPGHPAI 182 +VR+ G+ + L G LD + Y G H +++ E + RP HP Sbjct: 124 RVRLTVGKSDDLERALLDGSLDLAVVPSYPG---HATRCAQVVIGEDELWAAARPRHPLF 180 Query: 183 ------GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGV-VCETFSACISL 234 G R L YSW +P P + K + E Q P V + + A I + Sbjct: 181 QLALEQGLR-FGHLQGYSWALPAPGAAVRKVVDEAFAAQGLGAPTVALEIQHNTEATIDI 239 Query: 235 VAKSDFLSKLPEE-MGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASL 289 V ++D L +P + +P + L L + E+ + ++ LI + +PL ++L Sbjct: 240 VGQTDLLCYVPSHVLRSNP---ERLQSLSIPELRTRRSWLLISHPKAHWSPLMSAL 292 >UniRef50_A4YQI9 Transcriptional regulator of protochatechuate degradation (LysR family) n=14 Tax=Proteobacteria RepID=A4YQI9_BRASO Length = 316 Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 76/291 (26%), Positives = 133/291 (45%), Gaps = 19/291 (6%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + Q+ FV+VA GS A+ +L+++QPALS+ ++ LE L QLF R +GV LT+A Sbjct: 18 MNLKQLEYFVQVAELGSFSKAASVLDVAQPALSRQVRALESELKQQLFARNGRGVELTEA 77 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ H+ +L+ + A+ED+ + G++ IG+ SI+R L +I RF +++P Sbjct: 78 GKRLLDHSVGVLQLVAHAREDLGASRDAPVGRVTIGLPPSIARQLTLPLIDRFRKEYPAA 137 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ ++EG ++ + G +D + Y +L++ A+ H G Sbjct: 138 RLAVVEGLSTHVVEWVTTGRID--VGMVYNPEAQAGIEITPVLQEPLALVS---HAPKGK 192 Query: 185 RSI------KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTP--QVGVVCETFS--ACISL 234 R + +L YS MP + LL+ QA ++ + E S + I L Sbjct: 193 RRVTAPLPMTELSRYSLIMP----ERVHAMRRLLETQAALAGIRLDIAWEVSSVPSIIDL 248 Query: 235 VAKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPL 285 V + L L + P++E P + + R TPL Sbjct: 249 VCAGYGHAVLTPSGVAASGRASELTIRPLTEPAPTSVLCFVTSAHKRPTPL 299 >UniRef50_Q28JN5 Transcriptional regulator, LysR family n=3 Tax=Rhodobacteraceae RepID=Q28JN5_JANSC Length = 297 Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 1/191 (0%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M ++K + AF +AR GS++ A+ LN++QPA+SK+++ELE+ A+L R GV Sbjct: 1 MDRRIKFRHLDAFSAIARAGSLKQAAEQLNLTQPAISKTLKELEDIAGARLMDRSRAGVR 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT AG F Q A +R +R + +++G++ IG S++ +L+P ++ F + Sbjct: 61 LTPAGAVFLQFAEQGSNAVRQGLRSVRG-EAEMSGRLRIGALPSVAGTLVPRAVAMFRAK 119 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P V + +G + +LR G LD + + TF +L + + RPG Sbjct: 120 VPDTLVEVQDGSHHDLTAQLRSGGLDLVVGRLGRPHAMVGLTFRQLYTEPVIVVARPGSD 179 Query: 181 AIGARSIKQLL 191 S+ LL Sbjct: 180 VAKLTSLSDLL 190 >UniRef50_B3FNL1 PsfB n=1 Tax=Pseudomonas putida RepID=B3FNL1_PSEPU Length = 317 Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 80/289 (27%), Positives = 147/289 (50%), Gaps = 13/289 (4%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ ++ F + +GS+ A++ LN+ QPALS I LEE L LF R SKG+ T+A Sbjct: 1 MELRHLKYFTCLYEEGSVTRAAQRLNIVQPALSMQIARLEEELGQTLFERSSKGMAPTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ Y+ IL +L A++ + R GQ+ G+++ G+ AS + + + + ++ F + HPQV Sbjct: 61 GDQAYRLFMPILGQLLVARQTLIDRSGQIGGRLSAGLIASAANNALASTLAYFVEHHPQV 120 Query: 125 KVRIMEGQLVSMINELRQGELDF-TINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 ++R+ G +I ++ G LDF IN +Q Y+H L +++ + + Sbjct: 121 ELRVTSGYSQELIAKVLTGVLDFAVINQSFQ--YEH-LIGHDLFDEELLVATGAANRLNA 177 Query: 184 A--RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQA--QTPQVGVVCETFSACISLVAKSD 239 A + L + +P+P + + + L Q TPQ+ V + + + +SD Sbjct: 178 ALPLPLTSLAGFKLVLPSPRHGLRRVIDQHLAAQGIEVTPQLEV--DDLTVIEDFLRRSD 235 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTAS 288 ++S LP + LH L P++ P + ++ D+R+ PLT + Sbjct: 236 WVSVLPATVLHRGLHEGALRAYPLAA--PGISRRMVCVHDARR-PLTPA 281 >UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepID=A9W9P6_CHLAA Length = 301 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 53/176 (30%), Positives = 94/176 (53%), Gaps = 2/176 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R F VAR + A+ L+++QPALSK I +LE L LF R + + LT+A Sbjct: 1 MELRHLRYFEAVARHSHVTRAAAELHIAQPALSKQISQLERELGITLFDRVGRSLRLTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+ +A IL ++ A+ + +R G AG++ IG ++ L+P +++ FHQ++P + Sbjct: 61 GEALLPYARAILAQVEEARAAMAERIGLKAGRVTIGAPPTVGAHLLPPLLTIFHQRYPGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 +R+ E + S+++ L G D + D + T LL + + HP Sbjct: 121 TLRLHEAGIQSLLDLLEAGITDLAVVALPV--TDEQLTVTPLLNEPLVLIVSTTHP 174 >UniRef50_A4X3Q6 Regulatory protein, LysR n=2 Tax=Salinispora tropica RepID=A4X3Q6_SALTO Length = 340 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 59/186 (31%), Positives = 98/186 (52%), Gaps = 2/186 (1%) Query: 6 KIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFR-RSKGVTLTDA 64 + Q+R FV A G+I GA++ L+ SQ A+S +IQ LE+ L +LFFR R+KGV+LT + Sbjct: 8 SLAQLRYFVTSAEMGNISGAAQQLHASQSAVSMAIQRLEKQLDTKLFFRHRTKGVSLTPS 67 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G A +L + + R+ QG+ G +N+ + S++ L+PAV+SR + P + Sbjct: 68 GRVLLDPAKSLLAQAQEMLAHSREWQGETCGMLNVAVLRSVAPDLVPAVMSRVKKMRPGL 127 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 V + EG + ++ LR G + + G K+L + P P +G Sbjct: 128 AVTVHEGTMDDVLELLRTGTCELAVVPELPGQALSFARLAKVLMAAVVAWSDPLAP-VGR 186 Query: 185 RSIKQL 190 +++QL Sbjct: 187 ATLRQL 192 >UniRef50_B9Y467 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y467_9FIRM Length = 309 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 73/284 (25%), Positives = 137/284 (48%), Gaps = 10/284 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + +R FVEV R GSI A+ L++SQPA+S +I++LE+ LF R SK + LT++ Sbjct: 1 MTLRHLRIFVEVCRTGSITKAAESLHLSQPAVSLAIRQLEDYYGILLFDRISKKLYLTES 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +AS I+E + ++ AG + IG S ++P ++ RF+ + PQ+ Sbjct: 61 GNKMLSYASHIIESFDDMETQLKNWDS--AGTLRIGSSISTGTQMLPQLVRRFNLRFPQI 118 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + +++ + +++ +LD + Y + + + P HP Sbjct: 119 RTQVLIDNSRIIEDKVLTNQLDLALVESLS--YSPDIVCVPFYTDRLIVITAPKHPLTQN 176 Query: 185 R--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFS--ACISLVAKSDF 240 ++K L DY + P GS +++ + L A+ Q+ + E+ S + I+ V ++ Sbjct: 177 PECTVKALADYPVLLREP-GSGTREVVDALLVTAEV-QITPLWESTSTRSIINAVKENIG 234 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTP 284 +S LP E+ + + + LP++ LP +I R+ TP Sbjct: 235 ISILPYELVKNEIQSGAVAGLPLASPLPNRTCSIIHHRNKYLTP 278 >UniRef50_C4GDC9 Putative uncharacterized protein n=2 Tax=Bacteria RepID=C4GDC9_9FIRM Length = 314 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 85/143 (59%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I ++ +F+ +A++G+ AS +L +SQPALSK IQ LEE L LF R LT Sbjct: 1 MDITKLNSFIVLAKKGNFARASELLYISQPALSKRIQSLEEELGVPLFNRIGSRSYLTVE 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++F ++A ++ A ED+RQ G G +N G I +MP+ ISRFH+++P++ Sbjct: 61 GQNFLRYAQQMVSTYNLAVEDLRQINGLETGTLNFGATNFIGVYIMPSFISRFHKKYPKI 120 Query: 125 KVRIMEGQLVSMINELRQGELDF 147 + ++ ++++ L + +L+F Sbjct: 121 HINMIINNSRTILDMLHKNQLEF 143 >UniRef50_Q46R60 Regulatory protein, LysR:LysR, substrate-binding n=3 Tax=Cupriavidus RepID=Q46R60_RALEJ Length = 325 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 80/296 (27%), Positives = 134/296 (45%), Gaps = 7/296 (2%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 +V++ + FV V++ + A+ L ++QPA+SK++ ELEE +L R+ G LT Sbjct: 15 RVRLRHLYCFVAVSQTQHLGRAADRLGLTQPAVSKTLSELEELAGTRLLVRQRAGTELTT 74 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 AG F QHA IL ++ AA + + +I +G S+ +++ + RF +P+ Sbjct: 75 AGTRFLQHALRILADIDAAAGSVTGESAKTHERIRLGALPSVVPAVLTDAVLRFRATYPE 134 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V + + G ++I++L+ LD I FE L + RPGH A+ Sbjct: 135 VGLDVRTGMNRNLIDQLKADVLDLVIGRMDDPVAMESLWFESLGPDSLVLAVRPGH-ALT 193 Query: 184 ARSIKQLLD-YSWTMP-TPHGSYYKQLSE-LLDDQAQTPQVGVVCETFSACIS--LVAKS 238 S L+D +W + GS + +E LL G V ET A + L +S Sbjct: 194 KDSRPTLIDCLAWPLVIAAAGSIPRHNTESLLARHGLRLPDGCV-ETSDAYLGRLLAEQS 252 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 D + P + GLV LP+ + + L++ +D TP+ +L R Sbjct: 253 DCVWAAPMSATRRAMDEGGLVALPIDTLGTEEPVGLLRHKDRTLTPMAEALADCIR 308 >UniRef50_A6VSL4 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VSL4_MARMS Length = 384 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 67/236 (28%), Positives = 121/236 (51%), Gaps = 12/236 (5%) Query: 16 VARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHASLI 75 V + GS A++ L M+QPA+SK+++E+E + LF R +G+ A + Q ASL Sbjct: 95 VVKVGSASVAAQTLGMTQPAVSKTLKEIENMVQQPLFLRARRGLIPQTAAK---QLASLF 151 Query: 76 LEELRAAQ---EDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQ 132 L AQ ++ +L G++++GM + + ++P + +QH ++++ M+G Sbjct: 152 LRISPVAQSLHHSLQSLPNELTGRLSVGMLSFSCQDIVPIAFASIFKQHSGIRLQAMQGP 211 Query: 133 LVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG-ARSIKQLL 191 + N LRQGE+D + +GP E LL+ Q+A+ R HP A+++ L+ Sbjct: 212 YHMLANALRQGEIDCFLGLMRKGPLHPELIELPLLKAQYALIARADHPIHNEAKTLNDLV 271 Query: 192 DYSWTMP---TPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSKL 244 + W + TP Y++ L +D++ P + TF++ LV SD ++ L Sbjct: 272 NERWIVARHGTPIRDYFESLFHSIDNKP--PIQALEMLTFASSEELVIHSDAIALL 325 >UniRef50_Q398Q0 Transcriptional regulator, LysR family n=6 Tax=Burkholderia cepacia complex RepID=Q398Q0_BURS3 Length = 305 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 2/236 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +KIHQ+RA V V GSI+ A+R L+++QPA+SK+IQELE L R+ GV T Sbjct: 1 MKIHQLRALVAVTTAGSIKAAARTLHVTQPAISKAIQELENEFGVTLLERKPWGVVPTPE 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++ A ++ EL A ED+ +G G++ IG ++ + + F + P V Sbjct: 61 GDALLGRAQAVVRELERASEDMAHMKGLRDGRLVIGFTPIVAVTGFAEAYAAFRRHWPNV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + + E + +LR LD GP + A R GA Sbjct: 121 ECELRELTFNLLTEQLRNRTLDLAF-VAVTGPIAESVDIRAIRTFDTAFVTRENGRFAGA 179 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVV-CETFSACISLVAKSD 239 S++ L D W ++ + +L P + C +++ SL+ +D Sbjct: 180 TSLEALRDAEWIHADASDNFPTYIRDLHAHAGLPPPRCITRCTSYALFYSLLMTND 235 >UniRef50_A9BLF7 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=A9BLF7_DELAS Length = 426 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 63/265 (23%), Positives = 118/265 (44%), Gaps = 3/265 (1%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 A V Q+RA + +A GS A++ L ++QPA+ ++Q LE L QLF++ + G L Sbjct: 123 AETVPAGQLRALMAIADCGSESLAAQWLGLTQPAVHAALQGLETSLGMQLFYKLAFGTRL 182 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T +GE+ + L L E+R DI +G++ G++ +G+ +P + H Sbjct: 183 TPSGEALLRRVKLALAEVRGMDSDISAWRGEIRGRVVVGVLPLSVGIFLPRAVDSLAASH 242 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P ++V I++G S++ L ++D E L + + GH Sbjct: 243 PDIEVSIVDGTYESLVQHLLSADIDAIAGALRADMPSDEVRQLHLFDDDLVVVAPAGHAC 302 Query: 182 I--GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLVAKS 238 + G ++ LL + W P P + + +L Q + P+ + + + ++ V ++ Sbjct: 303 LDRGQLVLEDLLQWPWVSPLPGTPADRAMVQLFRSQGLEPPRASLRASSPTMTLAFVLQT 362 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPV 263 L+ HG L ++PV Sbjct: 363 GRLALASRGQALQDDHGGQLSIVPV 387 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 7/72 (9%) Query: 7 IHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAG- 65 + +RA + V R GS A++ +++SQPA+++S+ +LEE LF R ++G+ T G Sbjct: 26 LRAMRAMLGVVRHGSTTRAAQAMHLSQPAVARSVLQLEEACGLPLFMRGARGMMPTPLGS 85 Query: 66 ------ESFYQH 71 ES QH Sbjct: 86 QLAARIESMLQH 97 >UniRef50_Q0C276 Transcriptional regulator, LysR family n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C276_HYPNA Length = 316 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 70/300 (23%), Positives = 137/300 (45%), Gaps = 14/300 (4%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+ + V GS+ A+ + ++Q ALSKS+ LE + +LF R ++G+ LT Sbjct: 22 MELRQLEHVLAVVETGSLTSAAARVGLTQQALSKSLSRLESDIGGKLFERETRGMALTRL 81 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+ +HA ++ + G G++ +G+ + + + ++RF + HP + Sbjct: 82 GETVVEHARDVVASAGRLKSAAAAELGLERGKLVVGLSPIAATTFIGQSVARFAEAHPNL 141 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI-G 183 ++ + G + L +G++D ++T G D E+ + + I R HP + G Sbjct: 142 RIDVEAGLDTDFVAALHRGQIDLALSTRTIGQED-SVLVEQFTNEPWGIAGRIDHPWLGG 200 Query: 184 ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-----PQVGVVCETFSACISLVAKS 238 ARS+ L +W + G L E +++ PQ G+V + ++ + + Sbjct: 201 ARSLADLKGAAWVI----GRNTDLLDEAIEEAFAACGLARPQPGIVTTSVLFTLTALMTT 256 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 D L+ LP + C H L+ L +S +L++R+ + L+ R E G Sbjct: 257 DRLAILPRSL-CQ--HHTSLMWLDLSNGAWSTPLFLMRRKRAHIGLAARKLLDMLRTEAG 313 >UniRef50_Q7WNL3 LysR-family transcriptional regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WNL3_BORBR Length = 307 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 82/302 (27%), Positives = 144/302 (47%), Gaps = 23/302 (7%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + + I F+ V GS+ A+ ++QPALSKS+Q LE L R +G+ LT Sbjct: 1 MNLSLRDIEYFLAVIEHGSLGRAATACGVTQPALSKSLQRLEADTGLALLERGGRGLRLT 60 Query: 63 DAGESFYQHASLILEELR-AAQEDIRQRQGQLAGQINIG-MGASISRSLMPAVISRFHQQ 120 AG +F +HA + + R A + + R G+ AG + +G GA++ +MPA + R Sbjct: 61 SAGLAFREHAQKLWAQYRDAVRHAMELRVGE-AGLLRVGATGATMDAYVMPA-LQRLLPL 118 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P ++V++ +G + ++ G LD + Y G + + E + R GHP Sbjct: 119 RPALRVQLTQGLSDDLNAQVASGRLDLAVIPIY-GDIQPALRQDLIAEDGLCVAARQGHP 177 Query: 181 AIGAR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSA-CISLVA 236 R S++ L + W +P P + L + D Q P + + FS+ ++++A Sbjct: 178 LAARRKLSLRDLEGHRWILPHPSSVARQALDQRYADAGLQPPPAALEVQHFSSGALAMLA 237 Query: 237 KSDFLSKLPE---EMGCDPLHGQGLVMLPVSEILP-KAAYYLIQRRDSRQTPLTASLITQ 292 +SD L+ LP+ +MG + +LPV+ + + LI R + +P L+++ Sbjct: 238 RSDVLALLPQSALQMGA------AIAVLPVALGRSMRRSIVLISRHGAAWSP----LMSE 287 Query: 293 FR 294 FR Sbjct: 288 FR 289 >UniRef50_B2T4S2 Transcriptional regulator, LysR family n=18 Tax=Proteobacteria RepID=B2T4S2_BURPP Length = 329 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 71/248 (28%), Positives = 126/248 (50%), Gaps = 14/248 (5%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + QI+ F+ + GS+ A++ LN+ QPALS I +LE+ L QLF R + G+ T A Sbjct: 1 MDLRQIQYFIALFEDGSVTRAAKRLNIVQPALSMQIAKLEDELHQQLFERNAHGMAPTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G Y+ I+ +L A++ + QR + G ++IG+ AS++ S++ +SRF+ ++P V Sbjct: 61 GRLMYRLFLPIMRDLAHARQQLVQRDEVVTGHVSIGLIASVTESVLADALSRFNARYPHV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGH-PAI- 182 +V + +G + I+ + G+LD + + + LL+++ + H P + Sbjct: 121 EVTVADGYSATFIDWVAGGQLDAALINKPRARL--SLDAQPLLDEEMVLVTSAEHGPELP 178 Query: 183 GARSIKQLLDYSWTMPTP-HGSYYKQLSELLDDQAQTPQVGVV----CETFSACISLVAK 237 A + QL + +PT HG L +LD AQ V + + S + LV Sbjct: 179 HAIELAQLPELELVLPTKRHG-----LRGVLDTAAQHEDVLLAPRFEIDVLSTIVKLVET 233 Query: 238 SDFLSKLP 245 + F + LP Sbjct: 234 THFATILP 241 >UniRef50_C7QFB4 Transcriptional regulator, LysR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QFB4_CATAD Length = 296 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 73/267 (27%), Positives = 125/267 (46%), Gaps = 7/267 (2%) Query: 10 IRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFY 69 + F+EVAR+ S A+ L +Q A+S+ I LE + LF R +GV LT+ G + Sbjct: 6 LEVFLEVARRESFTAAAGSLGYTQSAISRQIAALESSVGVPLFDRLPRGVRLTEEGRAMV 65 Query: 70 QHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIM 129 HA+ +L LRAA D+R G + +G + +L+P ++ F + HP V V + Sbjct: 66 PHATAVLGRLRAAVADVRAVGTLGGGGLRVGAIPTADMALIPRAVAAFRRAHPAVAVSHV 125 Query: 130 EGQLVSMINELRQGELDF-TINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARSIK 188 EG ++ ++R+G+LD I T + P KL++ ++ H + R + Sbjct: 126 EGLTRGLVVDVREGDLDLAVIGTAHPEPAFEGVRLRKLMDDPLSVALPLDH-RLADRDLL 184 Query: 189 QLLDY---SWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSKLP 245 L D +W P S ++ +LD + Q P++ V +SA VA ++ +P Sbjct: 185 SLADLEGENWIAGQPR-SQDTLIAGVLDGEFQ-PRIPYVVLEWSAKQGFVAAGLGVTLVP 242 Query: 246 EEMGCDPLHGQGLVMLPVSEILPKAAY 272 +V L SE+ P++ + Sbjct: 243 ALAAAAVRPDVVVVALDQSEVAPRSVF 269 >UniRef50_B6JJI4 Transcriptional regulator of LysR family n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JJI4_OLICO Length = 308 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 59/243 (24%), Positives = 118/243 (48%), Gaps = 5/243 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + Q+R+ V +A GS+ A+ +L SQP+LS+ I++LE L +LF R ++GV LT+ Sbjct: 1 MDLRQLRSLVYIADSGSLSRAAEILRTSQPSLSQQIKDLEAELGMELFHRHARGVFLTEV 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + Y HA IL+++ A+E + + +G++ +G S R L A+I + +P + Sbjct: 61 GHTLYAHARSILKDVAFAKETVVNQSRNPSGKVLVGFPTSACRGLSAALIEKVKVNYPNI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + ++E ++ ++ LD + Y + + + + +P + Sbjct: 121 SIHLIEAMTGTLDEWMQNARLDIAV--LYDPRVFANISLHPVGIEDLVLVADSKNPILHR 178 Query: 185 RSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 SI +L +P + L TP+V + ++F+A + LV K+ +++ Sbjct: 179 NSIGFSELESIPLVLPGKQHVLRNYIEHLSTRNGITPRVIIESDSFNAIVELV-KAGYMT 237 Query: 243 KLP 245 +P Sbjct: 238 IMP 240 >UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=Actinomycetales RepID=C7PVI0_CATAD Length = 297 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 92/179 (51%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ HQ+R F+ VA A+ L+++QP+LS+ I+ LE L A LF R +TLTDA Sbjct: 1 MQFHQLRYFIAVAETRHFTRAAEALHVTQPSLSQQIRALEHELGADLFLRARGNITLTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+ A IL + AA+ ++++ G + +G S+ L+P V+ +H+++P + Sbjct: 61 GEALLPMARRILADADAARREVQELAELRRGHVRLGATPSLCTGLLPDVLRTYHRRYPGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 ++ + E ++ +L +G LD + T E+LL + + P P G Sbjct: 121 QLLVQESGSHDLVRDLARGALDLALVVLPLPSPSPALTTEELLREDLVVVSAPNLPPPG 179 >UniRef50_Q1M711 Putative LysR family transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1M711_RHIL3 Length = 307 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 53/154 (34%), Positives = 85/154 (55%) Query: 10 IRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFY 69 ++ F EVAR GSIR AS L+++ A+S+ I++LE+ L A LF R S G+ LT AGE Sbjct: 6 LKYFAEVARSGSIRKASDELHVATSAVSRQIKKLEDELGAPLFERFSDGLRLTAAGEIVL 65 Query: 70 QHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIM 129 +HA L + + D+ QG+ AG+++I S++ +P + FH++HP V RI Sbjct: 66 KHAKDTLLKYEIMKSDLGDLQGKCAGRVHIASLDSLAIQFLPEFVMGFHRRHPAVDFRIR 125 Query: 130 EGQLVSMINELRQGELDFTINTYYQGPYDHEFTF 163 S+ + L G+ D + P+D + + Sbjct: 126 YDNYTSIFHFLADGDADIGVTFDLARPHDIKLVY 159 >UniRef50_A3XE67 Pca operon transcriptional activator PcaQ n=4 Tax=Alphaproteobacteria RepID=A3XE67_9RHOB Length = 309 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 59/192 (30%), Positives = 92/192 (47%), Gaps = 4/192 (2%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M ++K + F +AR GS + A+ LN+SQPA+SK+++ELE L L R G+ Sbjct: 1 MDRRIKFRHLDTFSAIARAGSFKKAAAELNLSQPAISKALKELEGILGTDLMERDRSGIK 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT GE F Q A LR +R G +NIG+ S++ L+PA +S F + Sbjct: 61 LTQKGEVFLQFAEQSTAALRHGLRSVRT-SGDAKEHLNIGVLPSVASGLLPAAVSAFLKG 119 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 +P + + EG + + LR G+LD + + F +L ++ + P Sbjct: 120 NPDTLLEVHEGPHTDLTSRLRSGKLDLVVGRLGRPQSMQGLVFRQLCSEEVVVVAAPQS- 178 Query: 181 AIGARSIKQLLD 192 ARSI + D Sbjct: 179 --NARSIHRFED 188 >UniRef50_A9IJW2 Transcriptional regulator, LysR-family n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IJW2_BORPD Length = 310 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 73/239 (30%), Positives = 118/239 (49%), Gaps = 9/239 (3%) Query: 15 EVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHASL 74 EV +GS+R A++ LN++QPALSK++ E+E LF R ++G+T T G+ + A L Sbjct: 24 EVQARGSLRAAAQALNLTQPALSKALTEIEHAFGFALFARGARGLTPTAQGQVVLRGAGL 83 Query: 75 ILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQLV 134 +L EL + + + + IG +++ +P VI R Q V+V+++E ++ Sbjct: 84 LLRELTHVRAEA-AAASRYEASVRIGAPPFVAQVYLPDVIGRLVQGQTPVRVQLLEERVP 142 Query: 135 SMINELRQGELDFTINTYYQGPYDHE---FTFEKLLEKQFAIFCRPGHPAIGARSI--KQ 189 ++I LR+GELD + T+ + + KL QFA+ GH AR + + Sbjct: 143 ALIAALRRGELDALVTTFPRQMLAQDAGALQAIKLFAVQFAVMAPAGHALTRARRVGWAR 202 Query: 190 LLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFS--ACISLVAKSDFLSKLPE 246 L W MP S ++L E QA P V E+ S I LVA + +P+ Sbjct: 203 LSQEPWVMPG-VDSMGRKLIEQCFAQAGLPAPLPVVESSSPTTSIQLVAAGLGIGVVPD 260 >UniRef50_B7V886 Probable transcriptional regulator n=7 Tax=Pseudomonas RepID=B7V886_PSEA8 Length = 304 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 70/284 (24%), Positives = 128/284 (45%), Gaps = 4/284 (1%) Query: 14 VEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHAS 73 V + G++ G +R + +QP LSK ++ELEE + A LF R ++G+ T G + + HA Sbjct: 16 VSLMETGNLSGTARAAHTTQPGLSKWLKELEEDVGAPLFERHARGLRPTPYGMTLFNHAQ 75 Query: 74 LILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQL 133 +L E+ A++++ + ++ +G + + SL+P + F ++P +V ++EG + Sbjct: 76 RVLTEMERARQNLEAMRSGSGSRVLLGTSPASAPSLVPRALRAFLGRYPGAQVELLEGTM 135 Query: 134 VSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARSI--KQLL 191 ++ L + +LD + E L + + RPGHP A ++ + + Sbjct: 136 NGLLERLEKRQLDVVVGRLDNYAPRASLRCEVLYSEAIVVMARPGHPLAQAAALDWEDVR 195 Query: 192 DYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLVAKSDFLSKLPEEMGC 250 Y W + P +L L Q P + + A I L+ SD LS + Sbjct: 196 RYDWIVWPPGSPIRSKLDMALTQGGRQPPAYRLESSSMLANIELLRGSDMLS-IGSARVV 254 Query: 251 DPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 + L G GLV EI + A + R + + + L+ R Sbjct: 255 EHLAGLGLVARLALEIPGEGAVGMCWRDEPHRDRASEDLLACLR 298 >UniRef50_O66882 Transcriptional regulator (LysR family) n=1 Tax=Aquifex aeolicus RepID=O66882_AQUAE Length = 303 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 73/297 (24%), Positives = 141/297 (47%), Gaps = 20/297 (6%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I +++ FV VA GS AS +L ++QPA+++ I+ LE+ + A+LF R+ + LT+ Sbjct: 2 IDISKLKTFVTVAELGSFSKASEVLYITQPAVTQQIKALEKTVGAKLFQRQGGRMVLTEE 61 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ Y+ A L+L E+I + + L + + + A+ S ++P +I+ FH++ P Sbjct: 62 GKRIYEIAKLLLNSYEGLMEEIARIKKDLKDTLFLVLSATPSEYIIPKIIAEFHKEFPSS 121 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 K++I G + L G L+ + + P D +F LE + F P HP Sbjct: 122 KIKIFTGNSHDVEEGLVSGVLN--VGIIERKPSD-KFVDIPFLEDEIVFFTYPEHPIAKE 178 Query: 185 RSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 I ++L + M H K + E L+ ++G++ + + I + + + Sbjct: 179 GEIEPERLYELDLVMREAHSGTRKLVREKLE------ELGIMFDKLNIKIESTSSRNIIQ 232 Query: 243 KLPEEMGCD-----PLHGQ----GLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLI 290 + GC L+G+ LV++ + K +++I ++S T L ++ I Sbjct: 233 IVKNGYGCSFLSKGLLNGEIKAGNLVVVKIKGFEIKRRFHIIYPKNSTITFLASNFI 289 >UniRef50_B9BJK8 Transcriptional regulator, LysR family n=6 Tax=Burkholderia multivorans RepID=B9BJK8_9BURK Length = 338 Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 68/259 (26%), Positives = 118/259 (45%), Gaps = 8/259 (3%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 +K +R V + ++ + + +++ PA+SKS+ ELE GL LF R ++GV T Sbjct: 10 INLKARHLRLLVTIDTYRNLTQVADVTHVTVPAVSKSLAELERGLGLTLFQRTAQGVAPT 69 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 GE +HA +L L +++++ + G+++IGM + + L+P + Q+ P Sbjct: 70 PYGECLIRHAREMLAILHQTRDELKALRSGTEGKVHIGMLPASASVLLPEALRLLKQRSP 129 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 + EG S++ EL QG LD + F ++LLE+ + HP Sbjct: 130 GTNAMVTEGTTASLLPELWQGHLDLVVGRLPAPDTLGSFEEKELLEEPVVLMTGRQHPLA 189 Query: 183 GARSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACI--SLVAKS 238 +++ L Y W +P P GS + E + P ET S + + + S Sbjct: 190 RRKTLDWADLRPYPWILPPP-GSILRDPLERALEAHDVPLTNNYIETLSIHVMRAQLQIS 248 Query: 239 DFLSKLPEEMGCD---PLH 254 DF++ + G D PLH Sbjct: 249 DFIAVMAGTPGGDTVQPLH 267 >UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=Bacillales RepID=A9VF88_BACWK Length = 305 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 78/306 (25%), Positives = 137/306 (44%), Gaps = 13/306 (4%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 +++ Q+ F+ V+++ A+ LN+SQP+LS+ I+ LE + LF R K ++L Sbjct: 6 VISIELRQLEYFLAVSKELHFTRAAEKLNISQPSLSQQIRALEHEVGMPLFDRIGKKISL 65 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T+AG H+ I E+ A+ I+ G G + IG ++ L+P I F++Q+ Sbjct: 66 TEAGRVLLSHSKTIFHEVEQARSAIQDLNGLHHGSLTIGSLLTVVNYLLPPAILDFNKQY 125 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P +++ ++ + + +L Q ELD I + D E L + + + H Sbjct: 126 PNIELSVLGLRTGEIREKLLQNELDIGIT--FLPVQDKEIVSIPLYKSELTLVVPTSHSL 183 Query: 182 IGAR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT----PQVGVVCETFSACISLV 235 + SI++L DY + P Y L+EL+ Q P+ + T + I +V Sbjct: 184 TERKYVSIEELQDYPLIL-LPKNFY---LTELITSHCQNFNFKPKPILEISTMESLIQMV 239 Query: 236 AKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 A+ ++ LP+ D L + + + + P LI RRD T I Q + Sbjct: 240 AQGMGITVLPKPY-IDFLQNEHIQAIKIENPTPTIDIGLIYRRDKYMCAATRKFIEQLKI 298 Query: 296 ECGYLQ 301 LQ Sbjct: 299 TVHSLQ 304 >UniRef50_B1Z8M4 Transcriptional regulator, LysR family n=5 Tax=Rhizobiales RepID=B1Z8M4_METPB Length = 320 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 67/268 (25%), Positives = 130/268 (48%), Gaps = 7/268 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + Q+R F ++A G++ A+ +L ++QP+LS+ ++ LE+ L +L FR ++GVT T+ Sbjct: 1 MDLRQLRYFTQIAESGNVSRAAEVLRIAQPSLSQQMRNLEDELGVELLFRHARGVTPTEL 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G FY+HA IL+E+ A++ +R + +G+I++G+ S R L + + P + Sbjct: 61 GLKFYEHARRILQEVERAKDVMRSQATSPSGRISVGLPTSACRGLSLPLHRAMAEALPNI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRP-GHPAIG 183 + I+E ++ ++ G LD + Y ++H E ++E +F P HP Sbjct: 121 SLHIVEAMSGTLDEWIQSGRLDVAL-LYDHKAFEHVAWTEMMVED--LMFIVPTSHPLAA 177 Query: 184 ARSIK--QLLDYSWTMPTP-HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 R I+ Q+ + + P + + + E L + CE+ A LV F Sbjct: 178 RREIEFGQVFQQALPVVLPGRPNVLRGVIEQLAARHDITLAATDCESLPAIAELVRAQAF 237 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILP 268 + +P + +V +P+ + P Sbjct: 238 AAIMPHFALAAEIKRSEMVAIPIVDPTP 265 >UniRef50_A4XPG0 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas mendocina ymp RepID=A4XPG0_PSEMY Length = 294 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 6/178 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + +H ++ F+ VA GSI + L++SQPA+++ I+ELE L +LF R +GV LT+ Sbjct: 1 MNLHHLKVFLAVAEAGSISAGAERLHISQPAVTREIRELEANLDLRLFDRLPRGVQLTEG 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ +A I +AA+ D+R G++++G A++ L+P +ISRF HPQ+ Sbjct: 61 GQRLLDYARRIFALEQAAERDLRDFAQLEQGELHLGASATLGAYLLPPLISRFRALHPQI 120 Query: 125 KVRIMEGQLVSMINELRQGE--LDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 V + ++ +L G L F + Q YDH L A P HP Sbjct: 121 FVSLEVSNTEAVTRQLDDGRISLGFVEGPFAQADYDHRLLARDALLPVVA----PRHP 174 >UniRef50_C0WD61 Transcriptional regulator n=1 Tax=Acidaminococcus sp. D21 RepID=C0WD61_9FIRM Length = 294 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 51/142 (35%), Positives = 86/142 (60%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I+Q+R ++ V +G+I A+R LN+SQP LS I+ LEE + +LF R ++ +TLT A Sbjct: 1 MNIYQLRYYIAVVEEGTISAAARKLNLSQPPLSTQIKLLEEEVGTELFIRGARQITLTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G FYQ+A + + R A E+IR G +++G +S + + FH+Q+P V Sbjct: 61 GRRFYQYALEMTDIERQALEEIRDMGRGGTGTVHLGCISSAHVKEVYEGLDAFHRQYPLV 120 Query: 125 KVRIMEGQLVSMINELRQGELD 146 ++RI+EG + + +L + EL+ Sbjct: 121 RLRIVEGNTLELEEKLARNELE 142 >UniRef50_A6QK31 Transcriptional regulator LysR family protein n=64 Tax=Staphylococcus RepID=A6QK31_STAAE Length = 295 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 96/185 (51%), Gaps = 4/185 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 V I ++ F+EV +QG + AS+ L ++QP +SK+I+++E + LF R + + LTDA Sbjct: 4 VDIKHMKYFIEVVKQGGMTNASKSLYIAQPTISKAIKDIENEMGTPLFDRSKRHLILTDA 63 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ FY+ + I+ ++ + G G IN+GM A ++ ++ ++ FHQQ+P V Sbjct: 64 GQIFYEKSKEIVALYDYLPSEMERLNGLETGHINMGMSAVMNMKILINILGAFHQQYPNV 123 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHE-FTFEKLLEKQFAIFCRPGHPAIG 183 ++E ++ ++ E+D + T P DH F + L ++ + H Sbjct: 124 TYNLIENGGKTIEQQIINDEVDIGVTTL---PVDHHIFDYTTLDKEDLRLIVSREHRLAK 180 Query: 184 ARSIK 188 ++K Sbjct: 181 YETVK 185 >UniRef50_A6ULR6 Transcriptional regulator, LysR family n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6ULR6_SINMW Length = 307 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 76/308 (24%), Positives = 134/308 (43%), Gaps = 27/308 (8%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ ++ F +A G I A+ L +QPALSKS++ +E + +L + +GV LT A Sbjct: 1 MELRDLQYFEVIATTGHIGRAAEKLGRTQPALSKSVRRIESEIGTKLLVKSGRGVALTTA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLA-------GQINIGMGASISRSLMPAVISRF 117 G ++LE R+ + + Q ++A G + +G GA+ + L+P V SR Sbjct: 61 GR-------VMLERARSLRMSVEQNLREMADIAKGAVGNVRVGSGATTAEYLLPLVCSRI 113 Query: 118 HQQHPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRP 177 ++ P +K I G + L G++D + +G + +T +L E + Sbjct: 114 LREAPGIKFEISIGMNDVLRTALNDGKVDIVVGPVTKGD-ESNYTVHRLGEDSVVVAAAR 172 Query: 178 GHPAIGAR-SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLV 235 GHP + +I L DY W +P + + + + P V + S L+ Sbjct: 173 GHPLTRKKATIADLQDYGWVLPARSVVTRQWIDAAFASRDLSEPDVAIQTNNISLSPRLI 232 Query: 236 AKSDFLSKLPEEMGCDPLHGQGLVMLPVSEI-LPKAAYY----LIQRRDSRQTPLTASLI 290 A +D L+ + G+G V P+ EI LP+ + + R S P I Sbjct: 233 APTDLLTFISRRN-----LGRGRVGEPLVEISLPETTMHREVVAVHRNSSYMPPAVERFI 287 Query: 291 TQFRRECG 298 ++E G Sbjct: 288 AILKQEAG 295 >UniRef50_C5EI83 Transcriptional regulator n=2 Tax=Clostridiales RepID=C5EI83_9FIRM Length = 295 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 60/178 (33%), Positives = 95/178 (53%), Gaps = 5/178 (2%) Query: 13 FVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHA 72 F + +GSI AS++L++SQP LS ++ LE L LF R S+ + LTDAG+ FY+ A Sbjct: 4 FTTIVNEGSISAASKILHISQPPLSTQMKLLENELGVTLFERGSRAIALTDAGKVFYERA 63 Query: 73 SLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQ 132 IL+ AA++++ Q L G + +GM +S S + I+ F QHP + RI EG Sbjct: 64 QGILDMAGAARQEMEQMGRGLHGFLRLGMVSSTETSSIIGRIADFRAQHPGIYFRIYEGN 123 Query: 133 LVSMINELRQGELDFTINTYYQGPY-DHEFTFEKLLEKQFAIFCRPGH-PAIGARSIK 188 ++++L G ++ I + P+ + + L E+ PGH P + A SI Sbjct: 124 TYQLMDKLNTGLIEAAI---VRTPFPEDSYECCYLAEEPMMAVGMPGHFPDVAADSIS 178 >UniRef50_Q67SW7 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67SW7_SYMTH Length = 305 Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 70/269 (26%), Positives = 125/269 (46%), Gaps = 30/269 (11%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + + AF +A+ GS A+ L ++QP+++ IQ LE+ L QLF RR +GV LTDA Sbjct: 1 MDVQGLEAFWWIAKTGSFNRAAERLFLTQPSVTARIQALEKELGQQLFERRPRGVRLTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + HA +L++++ A++ + Q G +++G + S L+P ++ RF + +P V Sbjct: 61 GRALLPHAERVLQDIKRARQAVLDLQTASGGTLSVGSALTTSAYLLPDILLRFKRGYPNV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTIN---TYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 +V + G+ ++++Q LD T+ + P E L E+ + P HP Sbjct: 121 EVLVHTGR----SHQVQQLVLDDTVQVGLVHAPLPSHAEIVSYPLSEEPILLVVPPDHPV 176 Query: 182 IGAR----SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAK 237 AR ++ +L S+ Y+ + + Q P + + ++ A +V Sbjct: 177 --ARHSEVTLDELTQESFITTDRASGYWALVEQWWASQGFVPHITMELDSIEAAKRMV-- 232 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEI 266 L G GL MLP S + Sbjct: 233 ---------------LCGLGLTMLPYSTV 246 >UniRef50_Q12FV7 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=Q12FV7_POLSJ Length = 325 Score = 93.6 bits (231), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 111/211 (52%), Gaps = 15/211 (7%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++K ++ F+ VA+ GS++ A+ +L+++QPA+SK+++ELE LA +LF R +G LT Sbjct: 5 RIKFRHLQCFLAVAQHGSLQKAAGVLSITQPAVSKTLKELEALLAVRLFERGRRGAVLTR 64 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP- 122 +G++F +HA + LR A + + + + +G+ +++ L+PA++ + + Sbjct: 65 SGDAFARHAGASVSALREAVASVAPTRPHGSEVVTLGVLPTVAPQLIPALLLQLDAGNGA 124 Query: 123 ---------QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAI 173 + +RI +++ +LRQ ELD I + + + TFE L + Sbjct: 125 SRPAGLADLAISLRIHTAPNPALLTQLRQRELDLVIGRFAEPVHMVGLTFEHLYADPLVL 184 Query: 174 FCRPGHP-----AIGARSIKQLLDYSWTMPT 199 RP HP A+ + ++ L ++ +PT Sbjct: 185 AVRPDHPLLRDAALSSDALAHLPAFTAILPT 215 >UniRef50_B9Z4I9 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z4I9_9NEIS Length = 298 Score = 93.6 bits (231), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 69/234 (29%), Positives = 118/234 (50%), Gaps = 7/234 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++I+Q+R FV VA+QG + A+ +L++SQPA++ I+ LEE + LF R + GV LT A Sbjct: 1 MEIYQLRTFVTVAQQGHLTQAAELLHLSQPAVTAQIKALEEEVGMALFERTTGGVMLTRA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ A ILE + R +GQL+G+ IG+ + + A ++R +++P + Sbjct: 61 GQELLPRAQSILESAKDILNHARHLKGQLSGKALIGVSLTPEILKLGAWVARLTEKYPLL 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQG--PYDHEFTFEKLLEKQFAIFCRPGHPA- 181 +R+ G ++N +R+ ELD +Y G PY + T L E F I G + Sbjct: 121 DLRLQHGVTGGILNLVRKKELD---AGFYLGKNPYINVNTV-LLTELPFVIVMPKGWESR 176 Query: 182 IGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLV 235 + K+L W + S K SE+ + +P+ C+ + + +V Sbjct: 177 VDITVPKELGKLPWVGISQFSSLCKITSEVWRELNISPKKVAECDHVNTILDMV 230 >UniRef50_Q5X4A2 Hydrogen peroxide-inducible genes activator n=4 Tax=Legionella pneumophila RepID=Q5X4A2_LEGPA Length = 296 Score = 93.6 bits (231), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 3/184 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + + FV +A A++ +SQP LS I++LEE L LF R +K V LTD Sbjct: 1 MNLRDLHYFVILADVKHFGEAAKRCFVSQPTLSMQIKKLEEELGVVLFERTNKQVLLTDQ 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G IL + +E RQ + G++ +G+ ++S ++P V+ ++P++ Sbjct: 61 GSKLLDRTRKILILIDEMKELARQSEDPFTGELRLGVIPTVSPYMLPLVMPELKNEYPRL 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 KV ++E + +I +L QGELD I P D F+ + L E++F C HP A Sbjct: 121 KVWLIEDKTHRLITKLEQGELDVAIMAL---PIDKRFSCQILYEEKFYFACANTHPLAQA 177 Query: 185 RSIK 188 +S+ Sbjct: 178 KSVN 181 >UniRef50_P52661 HTH-type transcriptional regulator gbpR n=1 Tax=Azospirillum brasilense RepID=GBPR_AZOBR Length = 342 Score = 93.6 bits (231), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 68/241 (28%), Positives = 113/241 (46%), Gaps = 6/241 (2%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++K+ ++ FV + ++ A+ L MSQPA SK + +LEE L LF R +GV Sbjct: 15 RLKLRHLQLFVALDEHRNLHRAAASLTMSQPAASKLLGDLEESLGVTLFERHGRGVEPNW 74 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 G +HA IL L+ A E++ +G ++IG + + L+ VI+ + HP Sbjct: 75 YGGLMIRHARTILSGLQEAGEELNDLLAGHSGSVSIGTVMAPAVELVVPVITTLTRDHPD 134 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI- 182 +K+ + + +RQG +DF I F ++++ ++ CR GHP + Sbjct: 135 LKIAVAVETSDVLAERVRQGVMDFAIGRLPDHVDASCFDYQEISSEELCFVCRDGHPLLR 194 Query: 183 --GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISL--VAKS 238 + L+D +W + P GS + E L P V E+ S ISL VA++ Sbjct: 195 LGRPLTAADLVDATWIL-QPLGSLLRSRVEALFRAEGVPPPRKVIESASPVISLAMVAEN 253 Query: 239 D 239 D Sbjct: 254 D 254 >UniRef50_B8G0Z2 Transcriptional regulator, LysR family n=4 Tax=Firmicutes RepID=B8G0Z2_DESHD Length = 303 Score = 93.6 bits (231), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 113/244 (46%), Gaps = 17/244 (6%) Query: 7 IHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGE 66 I + F +VA + S A+ L +SQPA+S I+ LE +L +R SK V LT AGE Sbjct: 3 IETLEIFRKVAEEKSFSKAAEDLFLSQPAVSSHIRNLENEFGTKLIYRSSKHVDLTPAGE 62 Query: 67 SFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKV 126 Y+ A I+ + + A+E I Q Q ++G + IG +I ++P ++S+ +++P + + Sbjct: 63 ILYEQACRIINQYQEAKEKINQIQSIVSGNLRIGASFTIGEYILPELVSQTARRYPNLNI 122 Query: 127 RIMEGQLVSMINELRQGELDFTINTYYQGPYD-HEFTFEKLLEKQFAIFCRPGHP--AIG 183 + G + LRQ LD + +G EF E + + + P HP I Sbjct: 123 NVTIGNTEEIAQGLRQNRLDVAL---VEGKITGKEFILEPFMVDEMVLIALPSHPLAKIK 179 Query: 184 ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTP---------QVGVVCETFSAC-IS 233 + + L D W + GS ++ S+ + + P GV S I+ Sbjct: 180 GVTAQDLEDQVWIL-RETGSGTREFSDRFIETLKIPVKHSYGFSSNTGVKAAVLSGLGIA 238 Query: 234 LVAK 237 LV+K Sbjct: 239 LVSK 242 >UniRef50_B0TCS4 Transcriptional regulator, lysr family n=2 Tax=Firmicutes RepID=B0TCS4_HELMI Length = 310 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 48/136 (35%), Positives = 77/136 (56%) Query: 11 RAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQ 70 RAF VAR+GSI A+ L ++QPA+S+SIQ+LEE L LFFR KGV LT GE + Sbjct: 9 RAFYLVAREGSISKAAEQLYITQPAVSRSIQQLEEKLGCVLFFRTPKGVKLTKEGELLFP 68 Query: 71 HASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIME 130 + + ++ + Q G+I I G +I ++ +P + RF + +P +++ + Sbjct: 69 YIEQAFNFIAVGEKTLAQITALENGEITIAAGDTICKNYLPPHLKRFKEAYPGIRIHVTN 128 Query: 131 GQLVSMINELRQGELD 146 S I L++G++D Sbjct: 129 ENTPSTIRLLKKGKVD 144 >UniRef50_UPI0001B560AD transcriptional regulator, LysR family protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B560AD Length = 302 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 53/170 (31%), Positives = 90/170 (52%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 + + +R VEVAR GS A+ L +Q A+S+ I E LF R ++G+ T Sbjct: 3 DLTLTGLRVVVEVARTGSFSAAAHRLGYTQSAVSRQIAASERATGTALFERHARGIRPTT 62 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 AGE +HA +L+ + AA +++ + +LAG+I++G + S L+P +SR + HP Sbjct: 63 AGEVLIRHAGRVLDSVSAAGKELAGLRDRLAGRISVGAFPAASAVLLPRAVSRLLRAHPG 122 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAI 173 V V++ E + + LR+G LD + G +++F + E + AI Sbjct: 123 VDVQLAESATPAQLQSLRRGRLDVAVAVTGDGLPEYDFEGLRRTELRSAI 172 >UniRef50_C9YBM2 Putative uncharacterized protein n=2 Tax=cellular organisms RepID=C9YBM2_9BURK Length = 309 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 82/299 (27%), Positives = 144/299 (48%), Gaps = 14/299 (4%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 ++ +++ Q+R FV VA + A+ L+MSQP LS+ I++LEEGL LF R + V Sbjct: 9 LSMRLETRQLRYFVAVAEELHFGKAAVRLHMSQPPLSQQIRQLEEGLGVTLFERTQRSVK 68 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT AG+ F A L +L A + +R AG + G A+ + +++P+V+ F Q+ Sbjct: 69 LTYAGQVFLAQARNALSKLEEAVDVVRAAARGEAGFLRCGYTAASAYAVIPSVMHAFKQR 128 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 +P V+V + E ++R+G LD + + D EKL+E+ + HP Sbjct: 129 YPLVEVALRESLSGDQYRDIREGRLDIGLVRPFGALPD--LATEKLIEENLIVAIPSEHP 186 Query: 181 AIGAR--SIKQLLDYSWTMPTPHGS--YYKQLSELLDDQAQTPQVGVVCETFSACISLVA 236 R I L + + +GS ++ + LL + P++ A I+LV+ Sbjct: 187 LAQQRIVDIHDLQSQPFVGFSSYGSQYFHDMVENLLGGEKVVPKLVQRATQPHAVIALVS 246 Query: 237 KSDFLSKLPEEMGCDPLHGQGLVMLPV-SEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 L+ +P+ +H +V P+ + LP+ +L RR++ + LI+ F+ Sbjct: 247 AGLGLAIVPD--ASARVHMDRVVYRPLHASRLPRPELHLCWRREN-----ISPLISNFK 298 >UniRef50_C5CZT3 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZT3_VARPS Length = 434 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 74/275 (26%), Positives = 123/275 (44%), Gaps = 9/275 (3%) Query: 26 SRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHASLILEELRAAQED 85 +R ++QPA+S ++++LE GL L RR++G+ T AGE H +L ELR D Sbjct: 145 AREFGITQPAISSALKDLEGGLGVALLERRTRGLVPTPAGEMVAFHFKRVLAELRHIGPD 204 Query: 86 IRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQLVSMINELRQGEL 145 I +G L G +N+G ++P I+ +HP + V +E ++ LR G++ Sbjct: 205 IAASEGMLQGSVNVGALPLGRTQILPQAIASLLARHPGLHVATVESPYDALAASLRSGDI 264 Query: 146 DFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP-AIGAR-SIKQLLDYSWTMPTPHGS 203 DF + + E L E + ++ R GHP A G R L SW + + G+ Sbjct: 265 DFILGALRSSADARDLQQEALFEDRISVIARAGHPLARGVRVDFDALRQASWAL-SRQGT 323 Query: 204 YYKQLSELLDDQAQT--PQVGVVCETFSACISLVAKSDFLSKLPEEMGCDPLHGQGLVML 261 ++L E A+ P V + L+ SD L+ + + LV+L Sbjct: 324 PSRELLERFFSAAREAPPVPAVETGDLAVLRGLLLASDMLTAISAHQLRHEIRNASLVVL 383 Query: 262 --PVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 P+ E + L QR + +P +L+ + R Sbjct: 384 DFPLDET--RREIGLTQRLGAFPSPGARALMQEIR 416 >UniRef50_A0Q4Y0 Transcriptional regulator, LysR family n=13 Tax=Francisella RepID=A0Q4Y0_FRATN Length = 306 Score = 93.2 bits (230), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 69/286 (24%), Positives = 121/286 (42%), Gaps = 7/286 (2%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++ + Q++ FV A+ SI + +SQ A S S+ +LE L LF R K + L Sbjct: 2 RITLKQLQVFVNTAKSESISAGAEKCFISQAAASMSLSQLENMLDTTLFDRVGKRMKLNA 61 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 G++ A IL+E+ E + L+G+I IG +I+ ++P ++ F + HP Sbjct: 62 NGKNLLAKAIKILDEIEEF-ETFSVKNTLLSGKIVIGASTTIANYVLPKYVAIFKKLHPD 120 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEK-QFAIFCRPGHPAI 182 I+ G +IN + D + +G + + L K + I CR HP Sbjct: 121 TDFEIISGNTKEIINNVESLNCDV---GFIEGECNSQVIATSLWAKDKLKIICRVNHPLT 177 Query: 183 GARS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + IK LL+Y W ++ L+D+ + + + + A VA SD Sbjct: 178 TKNNLKIKDLLEYEWATREQGSGTFEIFFNALEDKVSSIKKAITLRSSEAIKQYVAYSDC 237 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLT 286 L+ + E + L +L ++ +Y + + T LT Sbjct: 238 LACISEVITTQALDTTKYSILETKDLDLSRNFYKLLHKKKYHTALT 283 >UniRef50_Q5YBA0 TfdR n=1 Tax=Sphingomonas sp. tfd44 RepID=Q5YBA0_9SPHN Length = 296 Score = 93.2 bits (230), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 75/289 (25%), Positives = 134/289 (46%), Gaps = 8/289 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ Q+R FV VA +G++ A+R L++SQP +++ I++LE+ L +L R SKGV +T+A Sbjct: 1 MEFRQLRYFVAVAEEGNLTAAARKLHVSQPPITRQIKQLEDELGVELLVRSSKGVQVTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F A +L+ A E R Q G+++IG + +++P ++ F P + Sbjct: 61 GKLFLVEAKRLLDISHTAIEKSRAAQAGELGRLDIGYFGATIYTVVPQLVRTFMTARPHI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCR--PGHPAI 182 V+I + LR G+L YY DH+ ++ E++ + R P Sbjct: 121 SVKIQRASKDEQVARLRDGQLGIGFARYYS--VDHDLQTMRIGEERLYLAERLDAAQPPS 178 Query: 183 GARSIKQLLDYSWTMPTPHG--SYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 ++++ S T+ G + ++ L P + E A +++V SD Sbjct: 179 PIDGLEKIHGRSLTVFPQLGRPGFADEVLRFLMTVNVQPAMTDPAEDVFAALAMVLVSDS 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASL 289 LS +PE + L G+ P+ +A + RD R + A L Sbjct: 239 LSIVPESVAR--LAWPGICFSPIEHPAAVSAISCVFLRDGRPPVVDAFL 285 >UniRef50_B7VQD4 Transcriptional regulators, LysR family n=7 Tax=Vibrio RepID=B7VQD4_VIBSL Length = 305 Score = 93.2 bits (230), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 72/272 (26%), Positives = 136/272 (50%), Gaps = 21/272 (7%) Query: 11 RAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQ 70 R F+ VA GSI+GA+ LN+SQP+L+ +I++LE + +F R+SKGV LT+ G F + Sbjct: 6 RYFLMVAHTGSIKGAAEKLNISQPSLTAAIKKLESDVGVAIFTRKSKGVELTEYGVLFRE 65 Query: 71 HASLILEE---LRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVR 127 A E+ L D++QRQ +G++ +G G + + + + QQ + Sbjct: 66 FAQEQQEKHLSLMHRFTDMQQRQ---SGKLKLGTGEAWWEQFVCKAVEEYKQQEKMGSLH 122 Query: 128 IMEGQLVSMINELRQGELDFTINTYYQGPYDH-EFTFEKLLEKQFAIFCRPGHPAIGARS 186 + G +S+++ L QG++D + G ++ + TF L + + A+F R HP + + Sbjct: 123 LEFGNNLSLMHHLVQGDIDLFVGHEIYGLHERCKVTFYPLFQDKEAVFVRAKHPLLTKKH 182 Query: 187 I------KQLLDYSWTMPTP-HGSYYKQLSELLDDQA---QTPQVG---VVCETFSACIS 233 + +++L + TP H + LS+ ++ Q + +VG ++ A + Sbjct: 183 LDPSLLRREMLAFPILQVTPDHSRHNSVLSDHVNSQPGGRDSEEVGRDVYDVDSLFASLD 242 Query: 234 LVAKSDFLSKLPEEMGCDPLHGQGLVMLPVSE 265 ++ SD + +M CD + +G L + + Sbjct: 243 MLRMSDAVMPYSHKM-CDWMKDKGFETLLIDD 273 >UniRef50_B9JPF3 LysR-like Transcriptional Regulator n=3 Tax=Agrobacterium tumefaciens RepID=B9JPF3_AGRRK Length = 306 Score = 93.2 bits (230), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 65/214 (30%), Positives = 111/214 (51%), Gaps = 11/214 (5%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M++Q++I IR FV A + R A+ LNMSQP LS+ I+ LEE + QLF R ++ V Sbjct: 1 MSYQIEIGSIRCFVVAAEELHFRRAAIRLNMSQPTLSQQIKRLEELMGVQLFIRSTRRVE 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAG---QINIGMGASISRSLMPAVISRF 117 LT AG SF HA IL ++ A + + G L+ ++ IG + + L+P ++SRF Sbjct: 61 LTRAGASFLDHAREILLKIDEAILNAKLEAGGLSPGGEELIIGAISPATSQLLPLILSRF 120 Query: 118 HQQHPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRP 177 Q+ P+ ++ I E + ++ + +G DF + + F+ LL ++F + P Sbjct: 121 RQRFPRTRLVIKEVDSIELLRGIERG--DFHVGLMRPPSNSNLVRFQHLLSERF-VAVMP 177 Query: 178 GHPAIGARSIKQLLDYSWTMPTPHGSYYKQLSEL 211 + ++ +L D++ HG + + EL Sbjct: 178 RQSVLARKTALKLSDFAG-----HGVFALKRFEL 206 >UniRef50_Q7WPW7 LysR family regulatory protein n=4 Tax=Bordetella RepID=Q7WPW7_BORBR Length = 297 Score = 93.2 bits (230), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 8/238 (3%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 ++ +K Q++AF +A GS + A+ L ++QP++S I+ELE L L R ++ Sbjct: 7 VSHNIKYRQLKAFRILAESGSFKHAADSLAVTQPSMSIMIRELESDLGVALIDRATRSAE 66 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LTDAG FYQ L++L A G++ I S++ + I+R H + Sbjct: 67 LTDAGRDFYQQIKGSLDQLEKAYSYANAAGKAEHGRVRIATLTSLAAEAVTTAIARMHAE 126 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P +++ +ME + + LR+ E+D + ++ D +F + L Q + GHP Sbjct: 127 RPGIQIELMERTYFNFLLALRRREVDLGVGILHEAHADLDFQY--LFSDQLVVVTPKGHP 184 Query: 181 AIGARS-IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAK 237 R +K L Y + +P G + L EL D A QV E S I++V K Sbjct: 185 LARQRQPLKHLGKYDVVVVSP-GPSLEALQELDADCAPPVQV----EQPSTAITMVRK 237 >UniRef50_A8H7F3 Transcriptional regulator, LysR family n=1 Tax=Shewanella pealeana ATCC 700345 RepID=A8H7F3_SHEPA Length = 300 Score = 93.2 bits (230), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 68/267 (25%), Positives = 130/267 (48%), Gaps = 5/267 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + ++ F +A S A+ L ++QP+L++SIQ++E+ L QLF R S+ V LT Sbjct: 1 MDLRHLKHFSALAECRSFSKAAEKLEITQPSLTRSIQKMEQDLGVQLFTRDSRQVKLTYH 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +H+ IL + + DIR G+LAG++ IG G S ++ +++ F + P + Sbjct: 61 GGIVLKHSDNILNRVHLLESDIRVNSGKLAGKLVIGGGTLTSSRILGELLNEFVKYSPSI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKL-LEKQFAIF-CRPGHPAI 182 V + + + L +GE+D + +D E + +F CRPGHP + Sbjct: 121 SVELRARDVSELHQLLAKGEIDLFVAETKVTQFDQRDDLEIINYCNSVGVFCCRPGHPLV 180 Query: 183 GARSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVV-CETFSACISLVAKSD 239 +++ +L D+ ++P + L L D + G++ E F++ + ++ Sbjct: 181 REKNLYTPRLKDFPLSLPRATTKEVEDLFGDLFDIERPAFSGLLRFELFNSISLPLYNTN 240 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEI 266 + LP+ + + L LV+L V ++ Sbjct: 241 MICLLPKLVIDEELKAGSLVLLDVKDM 267 >UniRef50_D0IVG8 L-carnitine dehydratase/bile acid-inducible n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0IVG8_COMTE Length = 311 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 74/273 (27%), Positives = 125/273 (45%), Gaps = 31/273 (11%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRR-SKGVTL 61 Q+ + Q+ FV AR GS A+ +N+SQP++SK+I +LE QLF RR ++G+ L Sbjct: 15 IQINLRQLEYFVAAARHGSTAKAALAINVSQPSISKAIADLEAQWGEQLFVRRHARGMDL 74 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T AG + + A ++E R Q R +AG + +G +++ +PA++++ + H Sbjct: 75 TAAGSARQREAQALIERARLLQGP---RTQAMAGLLRLGYLSTLGPRWVPAIVAQMRKSH 131 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCR----P 177 PQV++ +++G + S+ L +GELD + YD +L A P Sbjct: 132 PQVEIELVDGDIESLTRRLERGELDAALQ------YDLGLARPRLDMAHVADLTPYALLP 185 Query: 178 GHPAIGARSIKQLLDYSWT----MPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACIS 233 A+ ++ +L D + + PH Y L + TPQ+ + S Sbjct: 186 WGHALADKATVRLTDLALCPLVLIGLPHSREY--FLSLFREAGATPQIAFETGSLEMARS 243 Query: 234 LVAKS---DFLSKLP--------EEMGCDPLHG 255 LVA L+ P + +GC L G Sbjct: 244 LVAHGLGVGLLTTRPVVDKSQDGKRLGCRRLRG 276 >UniRef50_Q4K9Z6 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4K9Z6_PSEF5 Length = 315 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/172 (30%), Positives = 100/172 (58%), Gaps = 2/172 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++I Q++ FV V GS+ A+R ++++Q ALSK + LE L AQLF R + G+ + DA Sbjct: 1 MEIRQLKYFVAVVDAGSLSRAAREVHVAQSALSKQMSALEADLGAQLFHRSNSGIRVNDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ FY++A +L+ L+ A+ I G L+G I + + S++ ++ +I + +P+V Sbjct: 61 GKLFYEYAQGLLKHLQDARAAISSEPGALSGSIVVALPQSVASTVALPLIQAVARTYPKV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCR 176 ++ + E +++++L +G +D + T P + +F LLE+ F + R Sbjct: 121 ELHLNEELTGNLVDQLVRGRVDIALFTPIGLPP--QVSFSPLLEEDFYLIHR 170 >UniRef50_D1T293 Transcriptional regulator, LysR family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1T293_9BURK Length = 328 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 56/177 (31%), Positives = 84/177 (47%), Gaps = 4/177 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I +R +EVA GSI + +Q +S+ + E E+ L LF R +GV TDA Sbjct: 1 MNIESVRLLLEVADSGSINKVAARRQTAQSHISRQVSEFEKQLGTALFVRTGRGVVPTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G S L E A E +R G L+G++ +G+ S + LMP V R Q+HP + Sbjct: 61 GRSALPRLRRWLHETEALSESLRTEAGTLSGEVRLGIIPSAAHHLMPCVFQRLRQEHPGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFA-IFCRPGHP 180 ++ ++E Q + L G +D I +Q P E EK+L + PG P Sbjct: 121 RLNVVEAQGTELNAMLDSGSVDMAIVFRFQPPRGSE---EKVLAVAHTFLVSAPGDP 174 >UniRef50_A8FC52 LysR family transcriptional regulator n=4 Tax=Bacillus RepID=A8FC52_BACP2 Length = 291 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 65/244 (26%), Positives = 121/244 (49%), Gaps = 9/244 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I I AF+ V + GSI A+ L ++QP++S IQ LE+ L +LF R+ ++LT+ Sbjct: 1 MNIENIEAFIYVCQLGSINKAAEALYLTQPSVSARIQSLEKELDLKLFDRQRNKLSLTEK 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE FY HA IL + A+ ++Q + ++ IG +SIS +L+P ++ +++ + Sbjct: 61 GEQFYPHAKKILHSYQEAKHSLKQT--MIPYELTIGCASSISNNLLPNILPALKEKYENL 118 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP--AI 182 KV+I+ G ++ ++ ++DF I P + + +F HP ++ Sbjct: 119 KVKIVTGHSKDVVQKVINNQVDFGIVRTETHP---QIESIPIFSDPIGLFVPTYHPLASL 175 Query: 183 GARSIKQLLDYSWTMPTPHGSY-YKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 ++K+L + + +GS+ + L L TP + + + +LV + L Sbjct: 176 DNINMKELEEQPFIF-FDYGSFDWLMLHRLFQKNNITPNISIEVDHMETAKNLVLQGMGL 234 Query: 242 SKLP 245 S LP Sbjct: 235 SFLP 238 >UniRef50_A4J1K6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J1K6_DESRM Length = 308 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 75/304 (24%), Positives = 143/304 (47%), Gaps = 9/304 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + ++Q F VA + S GA++ L +SQPA+S I+ LE+ +LF R ++ VT+T+A Sbjct: 3 LSLYQFHIFKTVADKKSFSGAAQALYISQPAVSMHIKALEDHFRTKLFDRNTQQVTITEA 62 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G Y++A IL + A+ DI + G + G ++IG ++ ++P ++ F+++HPQV Sbjct: 63 GRILYKYADKILNLIDQAENDISRFTGNIEGPLSIGASFTVGEYVIPKILGTFNKEHPQV 122 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + + ++N + + E+D + E + L+ + I P +P Sbjct: 123 RALLQVTNTEQIVNLVLKQEIDLGL--IENQVNKTELVAKPFLQDELIIVIPPDYPLSEH 180 Query: 185 R--SIKQLLDYSWTMPTPHGSYYKQLSE--LLDDQAQTPQVGVVCETFSA-CISLVAKSD 239 + S++ L+ M GS ++++E L+++ + +V E S + ++ Sbjct: 181 QFISMEDLVALPLVM-REQGSGTRKITEARLIEEGVDLNTLNIVMELGSTEAVKEAVEAG 239 Query: 240 FLSKLPEEMGC-DPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 F + + + L LV + +I +YLI RD QT + IT C Sbjct: 240 FGTTIISKWAVQKELKLGTLVPVRFKDISLFRKFYLIYHRDKFQTTVVEEFITFLISFCS 299 Query: 299 YLQS 302 + S Sbjct: 300 GITS 303 >UniRef50_A5FEQ6 Transcriptional regulator, LysR family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FEQ6_FLAJ1 Length = 287 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 78/290 (26%), Positives = 130/290 (44%), Gaps = 12/290 (4%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + QI+ F+ +AR+ + +N++Q ALS+ IQ LE L QLF R + V LT A Sbjct: 1 MDLQQIKYFLALARELHFWNTAGKMNITQSALSRQIQSLENQLGVQLFERNKRNVKLTSA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + + L +L + RQ +G + I SIS S+MP ++SR P++ Sbjct: 61 GRFLQEKWEVELSKLEYIHQSARQIHLGESGTLTISHPDSISASIMPDILSRISDAFPKL 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 K+++++ + LR ++D I D EK+ AI HP Sbjct: 121 KIKLVQVLYENQQEFLRNYKIDLAITRDINHARD--IKSEKIYTDNLAIVVPENHPYQKP 178 Query: 185 RSIKQ--LLDYSWTMPTP-HGSYYKQLSE-LLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + + L + + +PT GS Y L + L + P+V + E SA I+LV K Sbjct: 179 EDLTKESLANQKFILPTTDEGSSYSDLIQRLFNSFENAPEVYLHSEFGSAIIALVRKGLG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLI 290 ++ LP+ + G + LP+ L I R P+ A+++ Sbjct: 239 IAILPDSYVFHEISGIRFIKLPLETDL------YINWRAEDHNPVLANVL 282 >UniRef50_A6AKU4 Transcriptional regulator, LysR family n=1 Tax=Vibrio harveyi HY01 RepID=A6AKU4_VIBHA Length = 405 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 3/220 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 F + Q++A V VA S ASR+L +SQ ++ ++ ++LEE L LF + S GVTL+ Sbjct: 103 FNITTTQLKALVAVANGQSFTEASRLLEVSQSSVYRASKDLEEILGFTLFEKTSSGVTLS 162 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 AG + + L E++ +++ + I +G L+P+ I+ F + +P Sbjct: 163 KAGTVLDKASKLAFVEIKQGLDEVALLSNRHNSNITVGCLPLARTCLLPSTINEFSKSYP 222 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 ++++++G +++ L+ GE+D I + E L E + I CR HP Sbjct: 223 DCQIQVIDGPYTDLLSHLKYGEIDILIGALRFPVPSPDIRQETLFESKNTILCRTDHPLT 282 Query: 183 GAR--SIKQLLDYSWTMPTPHGSYYKQLSEL-LDDQAQTP 219 SI+ L SW + + K E+ + D+ P Sbjct: 283 QKETVSIQDLQQASWVVSSKETPARKMFEEMFIKDELPVP 322 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 41/63 (65%) Query: 6 KIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAG 65 + +RA EV GSI AS + +SQPA++++I +LE+ + ++LF R S G+ T+ G Sbjct: 6 NLRHLRAISEVVNTGSISKASDTVFLSQPAITQAISKLEKSINSELFERTSDGMKPTEQG 65 Query: 66 ESF 68 ++F Sbjct: 66 QAF 68 >UniRef50_Q127N6 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q127N6_POLSJ Length = 328 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 29/296 (9%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 V + Q+RAFV VA+ S A+ L+++Q ALS I+ELE L Q+ +R ++ V L+ Sbjct: 1 MNVTLRQLRAFVAVAKSASFTEAAATLHITQSALSGLIKELEHVLGVQVVYRSTRKVQLS 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 + G F A+ IL++L A I + +G + + ++ +LMP I+ F+ ++P Sbjct: 61 EVGGEFLPLATRILQDLDEAYHAIHDLKALKSGVVRVAAPQLMACTLMPDAIAAFNSKYP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGP---YDHEFTFEKLLEKQFAIFCRPGH 179 V++R+ + + ++ +++ GE+DF I GP E L E F P H Sbjct: 121 AVQIRLSDCAVEAVQSKVHSGEVDFAI-----GPEREVSPEIATHSLFEIPFVAVFPPDH 175 Query: 180 PAIGARSIKQLLDYSWT------MPTPHGSYYKQLSELLDDQAQTPQV----GVVCETFS 229 P + +L +WT + + G Y ++LS D QA + + G+ + Sbjct: 176 P------LGKLKRVTWTDISRYPLISLQGEYTQRLSA--DLQAASGNLTLSPGMEVTFMT 227 Query: 230 ACISLV-AKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTP 284 +S+V A + LP L+G +L + K +YL+ ++D +P Sbjct: 228 TALSMVSAGLGVTTCLPYATSLLNLYGLQTRLLQAPTLRRK--FYLLTKKDRPLSP 281 >UniRef50_C1F961 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F961_ACIC5 Length = 288 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 70/260 (26%), Positives = 127/260 (48%), Gaps = 7/260 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ HQ+R +A G+ A+ ++QP+LS+ + +LEE L +LF R + + +T+A Sbjct: 1 MEFHQLRYVCAIAETGNFSRAAERCQVAQPSLSQQVLKLEEDLGVKLFDRLGRSLRITEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +F HA IL ++ AA+ + + + G + +G+ +I+ LMP + F +++P+ Sbjct: 61 GRAFLPHARSILHQMEAARASVAGKSKDVRGSVAVGVIPTIAPYLMPRYTAAFARKYPEA 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++RI+E ++ LR +D + D E L E FA+ + HP A Sbjct: 121 RLRIVEETTPVLVESLRNLSIDLAVLALPLRHKDLE-CIPLLTEPMFAVLPK-DHPRASA 178 Query: 185 R--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQ-TPQVGVVCETFSACISLVAKSDFL 241 + S+K L ++ M G ++ LS A+ TP++ F + +VA + Sbjct: 179 QTLSLKDLRGETFVM-LRDGHCFRDLSLAACSHARVTPRIAFESGQFRSLFGMVAAGMGV 237 Query: 242 SKLPEEMGCDPLHGQGLVML 261 S +P +M D G V L Sbjct: 238 SLVP-QMAMDRSAGCAYVRL 256 >UniRef50_A7ZAT2 Putative HTH-type transcriptional regulator n=2 Tax=Bacteria RepID=A7ZAT2_BACA2 Length = 302 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 4/177 (2%) Query: 7 IHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGE 66 I QI F+EVA+ S AS L++SQPALSK ++ LEE L +L R ++ + LTDAGE Sbjct: 3 IRQITYFLEVAKSNSFTKASENLHLSQPALSKMVKSLEEELKVELIDRSARQIALTDAGE 62 Query: 67 SFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKV 126 ++ +I++ + ++ G++ IG+ I P +I F Q +P V + Sbjct: 63 IVFEQGQMIMKSIDDLSTNLYDLLHLKKGKVKIGIPPLIGVLFFPKIIRGFKQLYPDVNI 122 Query: 127 RIMEGQLVSMINELRQGELDFTINTYYQGPYDHE-FTFEKLLEKQFAIFCRPGHPAI 182 +++E + E+ G LD + P D E F LL ++ +F HP + Sbjct: 123 KLIEHGGNKVKQEVEDGVLDLGVVI---EPVDEEQFDIIPLLNEELMLFVHSAHPLV 176 >UniRef50_P27111 HTH-type transcriptional regulator cynR n=108 Tax=cellular organisms RepID=CYNR_ECOLI Length = 299 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 73/294 (24%), Positives = 139/294 (47%), Gaps = 7/294 (2%) Query: 9 QIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESF 68 I F+ VA GS A+ L++SQPALS+ I++LEE L LF R + + LTDAGE + Sbjct: 5 HINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDAGEVW 64 Query: 69 YQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRI 128 Q+AS L+EL A + I G + I + + + + +++ F+ ++P + +++ Sbjct: 65 RQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSITLQL 124 Query: 129 MEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP-AIGAR-S 186 E + + L + ELD I + + E LL + A+ HP A+ + + Sbjct: 125 QEMSQEKIEDMLCRDELDVGIA--FAPVHSPELEAIPLLTESLALVVAQHHPLAVHEQVA 182 Query: 187 IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSKLPE 246 + +L D + + + +Q+ + PQV + + SA + L+ ++ + LP Sbjct: 183 LSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLLPA 242 Query: 247 EMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 + GL + ++ L + L++R++S QT + + +C + Sbjct: 243 AIAT---QHDGLKAISLAPPLLERTAVLLRRKNSWQTAAAKAFLHMALDKCAVV 293 >UniRef50_UPI00017889E9 transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017889E9 Length = 294 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 43/137 (31%), Positives = 85/137 (62%) Query: 11 RAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQ 70 R F+ A ++ A++ L+M+QP++S +I++LEE L LF R SKGV LT G++ YQ Sbjct: 9 RVFLHAAETSNLTKAAQNLHMTQPSVSYAIKQLEEALGVGLFDRLSKGVRLTQEGQALYQ 68 Query: 71 HASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIME 130 H +EL +A+ +++ + G++ IG +I + + +++ RFH ++P +++++ + Sbjct: 69 HVRQAFDELDSAERRLKKLKQFGEGRLRIGANGAIVKDFLLSLLDRFHARYPDIRIQLSQ 128 Query: 131 GQLVSMINELRQGELDF 147 + S++ L++G LD Sbjct: 129 ERTSSIVERLKKGSLDL 145 >UniRef50_A0AYH9 Transcriptional regulator, LysR family n=148 Tax=Proteobacteria RepID=A0AYH9_BURCH Length = 326 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 70/270 (25%), Positives = 123/270 (45%), Gaps = 18/270 (6%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 +++ +R FV VA + + A+ L+++QP LS+ IQ+LEE L LF R ++ + LTD Sbjct: 21 NMELRHLRYFVAVAEERNFTRAAERLHIAQPPLSRQIQQLEEALGVPLFERTARPLKLTD 80 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 AG FY HA +L + E + +R G++ +++G S ++P +I RF ++P Sbjct: 81 AGRFFYSHAVQLLAQT-TELESMTKRVGKIERSMSVGFVGSTLYGMLPKIIRRFRSEYPA 139 Query: 124 VKVRIMEGQLVSMINELRQGELDFTI-NTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 V++ + E + I L++G +D ++ P L E++ + GH Sbjct: 140 VELSLHEMSTMDQIKALKEGRIDVGFGRIRHEDPSVRRVV---LREERMIVALPVGHVLD 196 Query: 183 GARSIKQLLDYSWTM-----PTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAK 237 A+ + L D P SY Q+ D+A P+ + LVA Sbjct: 197 SAKPVLSLHDLVNDTLIIFPKAPRPSYADQVLAAFHDRALQPRRIYETRELQIALGLVAM 256 Query: 238 SDFLSKLP--------EEMGCDPLHGQGLV 259 + +S +P +++ PL LV Sbjct: 257 GEGVSVVPQSVYGLKRDDISYKPLDDPNLV 286 >UniRef50_A4VG25 Probable transcriptional regulator n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VG25_PSEU5 Length = 315 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/258 (25%), Positives = 121/258 (46%), Gaps = 7/258 (2%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 ++ +R + + G+ A+ L++SQPAL++S+Q LE + QLF R + VT T Sbjct: 1 MNIEFRHLRHALALVEHGNFARAAEALHLSQPALTRSLQALEAQVGEQLFDRSHREVTPT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 GE QHA +L + Q D++ +G G++ +G+G +L+ V++ ++ HP Sbjct: 61 TMGELLLQHARQLLLHAQDLQRDLQLARGLEQGELRVGVGPFAGAALVAPVLAILNRAHP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 V + ++ + L++ E+D + ++ D +T + L E CR GHP + Sbjct: 121 GVHLEVVLAPWQELPARLQRREIDLLVADLHEIEDDPSYTIQALGEHHTLPMCRAGHPLL 180 Query: 183 --GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTP-----QVGVVCETFSACISLV 235 S++ LL Y P +QL + L Q ++ + C++ + L+ Sbjct: 181 EHPEPSLEMLLKYPLAGPNLPEDIREQLLKRLPRALQNTWREQWKLAITCDSSAIIKQLL 240 Query: 236 AKSDFLSKLPEEMGCDPL 253 + L+ LP M D L Sbjct: 241 QGCEALAILPWFMVEDEL 258 >UniRef50_UPI0001AEC4E8 probable transcriptional regulator n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC4E8 Length = 294 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/179 (30%), Positives = 95/179 (53%), Gaps = 6/179 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 V QI+AFVEVA+ + A+ L+++QPALS +I+++EE L +LF R ++ V+LT Sbjct: 3 VSYRQIKAFVEVAKSSTFAEAAVNLHLTQPALSSAIKKMEEQLGGKLFQRNTRNVSLTPE 62 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE + +A +L + DI+ GQ+ I S + S +P ++S FHQ+ P V Sbjct: 63 GEVLFPNALRLLHDWDNTFSDIQNLFAMAKGQLTICAMPSFAESHLPNILSVFHQRIPNV 122 Query: 125 KVRIMEGQLVSMINELRQG--ELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 +RI++ + +I+E+ G E+ F+ ++ F+ L +F + A Sbjct: 123 NLRIVDVVMEQVIHEVTTGRSEIGFS----FEPERKDGLVFKSLFADEFVVVTNKAQSA 177 >UniRef50_Q2KXV3 LysR-family transcriptional regulator n=1 Tax=Bordetella avium 197N RepID=Q2KXV3_BORA1 Length = 296 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 11/207 (5%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++I Q+R+FV VA GS AS ++N+ QP LS+ ++ LE L A LF R +GV LT+ Sbjct: 1 MEISQLRSFVAVAEAGSYIRASDLMNVPQPTLSRQVRTLELELRASLFHRHGRGVRLTER 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G F +A ++ + AA +R G + +G+ SI R L+P + ++ P+ Sbjct: 61 GGKFIDYARSVIHTVDAAVASVRDSDAVYTGSLIVGLTPSIGRLLIPTLAPLLKERFPRA 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIF----CRPGHP 180 VR+ EG ++ ++ G++DF G E L +Q + PG P Sbjct: 121 SVRLTEGLSGALYEKVLLGQIDFAAVLSPAG--SSHLDIEPLATEQLYLVGPPAALPGSP 178 Query: 181 AIGARSIKQLLDYSWTMPTPHGSYYKQ 207 I + +L++ + PH S + + Sbjct: 179 DI---ELSELVNLPLIL--PHSSQWTR 200 >UniRef50_B8IVL1 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=B8IVL1_METNO Length = 318 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/245 (26%), Positives = 104/245 (42%), Gaps = 9/245 (3%) Query: 13 FVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHA 72 F +A G + A+ L +QPAL+K IQ LE + A+LF R S+G+ LT GE A Sbjct: 9 FEVIADLGHLGRAAERLGRTQPALTKCIQRLEASVGAELFARSSRGLALTQVGEVLLARA 68 Query: 73 SLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQ 132 + + A ++ AG + IG GA+++ L+P V P V V + G Sbjct: 69 RRMRTAMDEALREVSDFAAGAAGHVRIGTGATMAEYLLPQVCRALIAAAPAVTVELQIGM 128 Query: 133 LVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG-ARSIKQLL 191 + LR +LD I +D EF + GHP G SI+ L+ Sbjct: 129 SGVLRTALRDNQLDLIIGPVLASDHD-EFAHVTFGTDDVVVVAARGHPLCGRPLSIEDLV 187 Query: 192 DYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLVAKSDFLS------KL 244 + W +P + + L + P V + + + L+ ++D LS L Sbjct: 188 KWKWVLPAKSVAMRQWLDTVFQAHGLPGPAVQIETNSITMLPRLIGETDLLSFTSTRNLL 247 Query: 245 PEEMG 249 P+ +G Sbjct: 248 PDRLG 252 >UniRef50_A6UBA0 Transcriptional regulator, LysR family n=7 Tax=cellular organisms RepID=A6UBA0_SINMW Length = 306 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 61/246 (24%), Positives = 117/246 (47%), Gaps = 5/246 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + ++RA E++ + ++ + L +S A+S+ I LE+ + L RR +GV LT A Sbjct: 1 MDLSRLRALRELSIRKTMAAVAEALYVSPSAVSQQIALLEQEVGIDLIERRGRGVELTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ + A IL EL +A+ DI + + +AG++ + S++ +++ I H+ HP++ Sbjct: 61 GKQLVERAERILIELESARADIAELKKVIAGELRVAAFPSVAGAVVAGAIHGLHRLHPRL 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTIN---TYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 V+ E + + LR + D I G D L+E F + HP Sbjct: 121 TVQFDEMEPAESLAALRSWQTDIAIIDDLNVPSGALDPNIETIPLMEDVFNVMVSRTHPL 180 Query: 182 IGARSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 ++ QL + W + T +Y + +++ + TP + C+ F I+L+ + Sbjct: 181 AEQSTVMLHQLRNERWALDTASSTYNRMITDACQEAGFTPNIVARCKGFEVTIALIRQGY 240 Query: 240 FLSKLP 245 +S LP Sbjct: 241 GISILP 246 >UniRef50_C6XUT8 LysR substrate-binding n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XUT8_PEDHD Length = 294 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 71/286 (24%), Positives = 140/286 (48%), Gaps = 8/286 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++I QI F++ A A+ ++Q LS+ I++LEE L LF R K V LT+A Sbjct: 1 MEIRQINYFIKAAEMLHFTEAAAACFVTQSTLSQQIKQLEEELGMLLFDRVGKHVRLTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + +HA I+ +++ +++ I + + G + IG+ + S L+PA ++ F ++P + Sbjct: 61 GNVYLKHARQIVLDVKKSKQAILELNNLVTGDLKIGVTYAFSSMLLPA-LAPFSSKYPGI 119 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDH-EFTFEKLLEKQFAIFCRPGHPAIG 183 K+ + G + + L+Q ELD + + Q D+ E L + ++ HP G Sbjct: 120 KIVVEYGTAGELEHNLKQAELDVILAFHDQTDNDNVSLEMEHLFSSRISMVVSKKHPLAG 179 Query: 184 AR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 + S+ +L +P+ S L+EL + +P + + + +S+V + ++ Sbjct: 180 LKKISLNELAKVELILPSKGFSSRDLLNELFRKRKLSPLIKIEMNDVHSLLSMVDEGNWA 239 Query: 242 SKLPEEMGCDPLHGQGLVMLPVS-EILPKAAYYLIQRRDSRQTPLT 286 + + E+ L + L+ +P+S + K A+ L Q+ R+ T Sbjct: 240 TIINEKA---ILTWENLIAIPISGKEYYKQAFILWQKGIYRKKSAT 282 >UniRef50_B6WUU7 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WUU7_9DELT Length = 302 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 51/147 (34%), Positives = 77/147 (52%) Query: 11 RAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQ 70 R F +VAR + A+ ML SQPA+S+S+ LE L +LF R +GV LT G FY Sbjct: 9 RIFYQVARCRNFSRAAAMLFTSQPAVSRSMAALERELGCRLFIRNRRGVELTPEGRMFYA 68 Query: 71 HASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIME 130 H E+ R +E++ Q G +G I +G + R + + RFH +P V++R+ Sbjct: 69 HVEAGCEQFRRGREELEQAVGLQSGSIALGASETALRHWLLPRLDRFHALYPGVRLRLFG 128 Query: 131 GQLVSMINELRQGELDFTINTYYQGPY 157 G I+EL+ G +DF + G + Sbjct: 129 GTSRQAIDELKSGAIDFAVAAVPGGGF 155 >UniRef50_Q1YUD1 Probable transcriptional regulator n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YUD1_9GAMM Length = 297 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 101/195 (51%), Gaps = 12/195 (6%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I+QI F VAR GS A+ L +SQPALS +++ LE+ L +L R ++ VTLT Sbjct: 3 IPINQIVVFTTVARTGSFAEAAIQLYLSQPALSVAMKNLEQSLGGKLLARTTRSVTLTPE 62 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++FY A +L E + +D+R G+++I + + + +P +++ FH Q+P + Sbjct: 63 GKAFYPVARRLLSEWEQSMQDVRNHFALGRGKLDIAAMPTYTTNFLPKILAEFHSQYPNI 122 Query: 125 KVR---IMEGQLVSMINELRQGELDFTINTYYQGPYDH-EFTFEKLLEKQFAIFCRPGHP 180 + ++ +V M+ E R EL T P D + F+ L + +F HP Sbjct: 123 HITVHDVIAENVVQMVREER-SELGITF-----APEDAPDLHFQPLYQDRFVAILPFKHP 176 Query: 181 AIGARSIK--QLLDY 193 + +++K LL Y Sbjct: 177 LLEKQTLKWIDLLAY 191 >UniRef50_D2MBA7 Transcriptional regulator, LysR family n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2MBA7_RHOPA Length = 304 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 74/260 (28%), Positives = 124/260 (47%), Gaps = 8/260 (3%) Query: 10 IRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFY 69 +R F EVAR GSIR A+ L+++ A+S+ I +LE L A LF R GV LT AGE Sbjct: 6 LRYFNEVARLGSIRKAADRLHVAPSAVSRQIAQLEHELDAVLFERSKVGVQLTPAGEVLA 65 Query: 70 QHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIM 129 + ++ I +L A+ +I +G G++++ + + L+P +++ FH ++P V RI Sbjct: 66 RQSNRIFRDLDRARNEIDDLRGLRRGEVSLFVIEGLVSGLLPDLLANFHHRYPAVTFRIQ 125 Query: 130 EGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARSIKQ 189 G +I L + E D I T+ P + +E A P H A + Sbjct: 126 TGSTDRIIEALLEDEADIGI-TFNATPRPEIEVIAEHVEP-IACLVAPTHE--FANRVSL 181 Query: 190 LLD--YSWTMPTPHGSY-YKQLSE-LLDDQAQTPQVGVVCETFSACISLVAKSDFLSKLP 245 LD + T+ P S+ +Q+ E + + +TPQV V + + A ++ +P Sbjct: 182 TLDDICTQTIALPEHSFGLRQVFERAIAKRQRTPQVLVTTNSLELTKRMAATGQVIAFMP 241 Query: 246 EEMGCDPLHGQGLVMLPVSE 265 LH L +P+++ Sbjct: 242 ALTVITELHSDALRAIPIAD 261 >UniRef50_Q8E8W2 Transcriptional regulator, LysR family n=1 Tax=Shewanella oneidensis RepID=Q8E8W2_SHEON Length = 296 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 109/204 (53%), Gaps = 6/204 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ ++ F +A++ + + A++ LN++QP+LS+SIQ LE L +L R S+ +LT A Sbjct: 2 IEFKHLKNFQILAKERNFQKAAQKLNLAQPSLSRSIQRLEHLLGTELLLRGSQSTSLTPA 61 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE H+ IL+ + +++++ QG+ +G ++IG + +++ ++ RF +Q+P + Sbjct: 62 GELVLSHSQHILQNVETLRKELQYMQGKSSGYLSIGASPVPANTILGPILGRFFEQYPDI 121 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQF-AIFC-RPGHPA- 181 + + G + +L +GEL I HE + F A+FC R GHP Sbjct: 122 HIDLEVGTWQQQLEKLLRGELTLLITDVEGEIIGHESAIQSFNLPSFEAVFCTRVGHPLT 181 Query: 182 -IGARSIKQLLDYSWTMPT--PHG 202 + +++ + +Y +P P+G Sbjct: 182 YLDHLTLEDIRNYPLAIPKNLPYG 205 >UniRef50_A4BGW9 Transcriptional regulator n=1 Tax=Reinekea blandensis MED297 RepID=A4BGW9_9GAMM Length = 409 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 5/205 (2%) Query: 9 QIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESF 68 Q+R + + S A+R +N+SQPA+ ++ ++LE L LF + S G+ LT A ++ Sbjct: 110 QLRTLIALQHTTSFSAAAREMNVSQPAVYRAARDLESLLDMSLFEKTSHGIALTKAAKNL 169 Query: 69 YQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRI 128 ++ L EL A ++ + G I IG L+P I R P V + I Sbjct: 170 TRYVLLAFRELELAFTELAELNGSDITHIAIGSMPLARTILLPRAIDRLSSLKPDVSISI 229 Query: 129 MEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARSIK 188 ++G ++ L GELDF + P + + + I R GHP + I+ Sbjct: 230 VDGPYDDLLMRLLNGELDFLVGALRDPPPSTDVEQTAMFDSPLQIAARNGHPLVEQSDIQ 289 Query: 189 --QLLDYSWTMP---TPHGSYYKQL 208 L +YSW +P TP + ++ L Sbjct: 290 LSDLAEYSWVLPRTGTPTRTIFENL 314 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 40/64 (62%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + ++ F EVAR SI A+ ++Q AL+++I ++E+ L A LF RR G+ LTDA Sbjct: 6 INFRHLKLFSEVARLHSINAAAEQNFVTQSALTQAILKMEKQLGADLFQRRHNGMFLTDA 65 Query: 65 GESF 68 G+ F Sbjct: 66 GDMF 69 >UniRef50_B9JHQ9 Transcriptional regulator protein n=6 Tax=Rhizobiales RepID=B9JHQ9_AGRRK Length = 312 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 97/185 (52%), Gaps = 7/185 (3%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 V ++R+FV++ GS+ A+ +L +QPALS+ I LE +L R + G+ T Sbjct: 1 MSVDFRKLRSFVKIVDTGSVSRAASILRTAQPALSQQIAALEAHFKHKLLIRSNVGIAPT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGA-SISRSLMPAVISRFHQQH 121 +AG Y+HA L+L+++ AQ DI Q LAG+++IG+ S S +L +I QH Sbjct: 61 EAGLILYRHAQLLLKQIEQAQTDINQSTRSLAGRVSIGLATYSTSSALSLPIIKEMKAQH 120 Query: 122 PQVKVRIME--GQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGH 179 P++ V I + G ++S + + G++D + Y P T + L ++ + PG Sbjct: 121 PKIVVHINDSFGHILSEL--IMTGKMDMAL-IYSANPIK-GVTLQPLFREEMFLVSPPGS 176 Query: 180 PAIGA 184 GA Sbjct: 177 TLPGA 181 >UniRef50_D0XP31 Transcriptional regulator, LysR family n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XP31_9CAUL Length = 403 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 82/299 (27%), Positives = 136/299 (45%), Gaps = 10/299 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 V Q+RAF+ +A GS ASR +SQP L S+++LE+ A + R+ +GV LT A Sbjct: 103 VTATQLRAFLALADAGSFVAASRATGLSQPGLHASVRDLEQICAVPIVERQGRGVVLTRA 162 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRS-LMPAVISRFHQQHPQ 123 G + A L EL AA +I G A +I++G +SR+ L+PA ++ P+ Sbjct: 163 GRRLARGARLARAELAAALVEILPGGGGDANRISVG-AMPLSRAVLLPAAVAGMVASEPE 221 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 ++ +++G +++ LR G +D + P + LL + + R GHP Sbjct: 222 FQIDVVDGAWRELVDPLRDGVIDVMVGALRDEP-PPDLEQRPLLHDRLMVVGRAGHPLAS 280 Query: 184 --ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 A L Y W + P GS + L + + P V C + +A ++ +SD L Sbjct: 281 DPAPDRDALAAYPWVIGRP-GSPLRLLWQAMFAGGPVPAAPVECGSVTAIRGILRQSDLL 339 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYL--IQRRDSRQTPLTASLITQFRRECG 298 + L + L + V+ P+ P+ + R D R TP A ++ + G Sbjct: 340 TLLSHDQVA--LEIEVGVLAPIGPPRPETVRTIGVTTRADWRPTPSQARFLSLLEQAAG 396 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 38/69 (55%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 F + + +RA V +G + A+ + +SQPAL++ + +LE L A+L R+ GV T Sbjct: 8 FDLNLRHLRALGVVIARGGMSAAADTVGLSQPALTQGLAKLESRLGARLLMRQPDGVRAT 67 Query: 63 DAGESFYQH 71 +AG + Sbjct: 68 EAGRILAER 76 >UniRef50_Q472M0 Transcriptional regulator, LysR family n=7 Tax=Burkholderiales RepID=Q472M0_RALEJ Length = 320 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 8/230 (3%) Query: 10 IRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFY 69 +R EV R+GSIR A+ L+++ A+++ I +LE L A +F R +K + LT GE Sbjct: 24 LRYLDEVVRRGSIRKAAESLHVAPTAINRQILDLEAELGAPVFDRINKRLRLTPLGEMVL 83 Query: 70 QHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIM 129 H L E A +E I + +G G++ + + A ++ SLMP++ FHQ++P + VR++ Sbjct: 84 AHVRQTLREHEALRERIEEFKGARRGEVTVAVTAGLAGSLMPSLTHEFHQRYPGIVVRVV 143 Query: 130 EGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARSI-- 187 + + ++ + QG+ D + Y P + Q PGH S+ Sbjct: 144 DLPIADIVLAVEQGDADLGLG--YDLPAAPALRILGTSDWQIGAVVPPGHELAAQPSVLL 201 Query: 188 KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAK 237 + + Y +P P S + +LDD + V S ++L+ + Sbjct: 202 SECVGYPLVLPAPSLS----IRAILDDAFARHAIDVTPAAESTSMALIQR 247 >UniRef50_A7HFD0 Transcriptional regulator, LysR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HFD0_ANADF Length = 297 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 93/175 (53%), Gaps = 2/175 (1%) Query: 13 FVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHA 72 FVE+ R+G A+ + ++QPALS +I+ LE L +L R + VTLT G +F HA Sbjct: 11 FVEIVRRGGFTRAADAIRVAQPALSSAIRNLEAELGVRLLNRGGRQVTLTPDGRAFLAHA 70 Query: 73 SLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQ 132 IL +R + ++++RQG + G++ + + A ++ P V+S F +HP++++ + G Sbjct: 71 EEILSRVRGLELEMQERQGLVRGELVVALPAMLATYAFPGVLSAFRVRHPRLRLAVETGG 130 Query: 133 LVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARSI 187 ++ + + G +D + + + + +LL + GHP G RS+ Sbjct: 131 ARTIEHRIAAGAVD--VGIVARDGVREDLVYRRLLRDEVVACVARGHPLAGRRSL 183 >UniRef50_D0D0K4 Transcriptional regulator n=1 Tax=Citreicella sp. SE45 RepID=D0D0K4_9RHOB Length = 300 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 80/294 (27%), Positives = 142/294 (48%), Gaps = 8/294 (2%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 MAF ++ Q+R F+ VA G++ GA++ L +SQ A++++I+ELE L QLF R +G+ Sbjct: 1 MAFTLR--QLRYFLAVAESGTVSGAAQALAISQSAVTEAIRELEADLGVQLFERHPRGLD 58 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 +T G F +HA+ IL + A+ + + +L G++++G+ + ++ ++ ++SRF + Sbjct: 59 ITQKGHQFLRHATGILGSVSDARLSLSKDPDRLRGKLHVGVTSLVAGYVLSDILSRFRRA 118 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 +P V+V +E + + L GELD + E + + ++ GH Sbjct: 119 NPGVEVTALEDSGEYLEHLLIGGELDAAVMVTTNMRDRMALQTEIIDTSPYQLWLPNGHE 178 Query: 181 AIGAR---SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAK 237 + R SI+ L+D M + LL P+V + A SLVA Sbjct: 179 -LSTRTSVSIEDLVDEPIIMLRVD-EIEEATRRLLSAFGARPRVAFRTRSVEAVRSLVAT 236 Query: 238 SDFLSKLPEEMGCD-PLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLI 290 ++ LPE + L G +V VS LP ++ R+ + +P T I Sbjct: 237 GAGIAILPELVYRRWSLEGDRIVSRDVSGSLPVVQVGVVWRKGAPLSPATREFI 290 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P77744 HTH-type transcriptional regulator abgR n=48 Tax... 397 e-109 UniRef50_D0YA85 Transcriptional regulator, LysR family n=5 Tax=K... 341 2e-92 UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=... 284 2e-75 UniRef50_Q46UX6 Transcriptional regulator, LysR family n=4 Tax=C... 266 7e-70 UniRef50_B5JN19 Putative uncharacterized protein n=1 Tax=Verruco... 263 7e-69 UniRef50_Q1IRZ3 Transcriptional regulator, LysR family n=1 Tax=C... 259 7e-68 UniRef50_A9WGB3 LysR substrate-binding n=2 Tax=Chloroflexus RepI... 257 4e-67 UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=P... 256 6e-67 UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=G... 256 9e-67 UniRef50_B7RS97 Transcriptional regulator, LysR family n=1 Tax=R... 256 1e-66 UniRef50_B2T4Q8 Transcriptional regulator, LysR family n=3 Tax=B... 255 1e-66 UniRef50_C3KNJ1 Putative transcriptional regulator, LysR-type n=... 254 2e-66 UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Ba... 254 4e-66 UniRef50_D2P368 Transcription activator of glutamate synthase op... 253 4e-66 UniRef50_A3DB82 Transcriptional regulator, LysR family n=4 Tax=G... 252 1e-65 UniRef50_Q1QYT3 Transcriptional regulator, LysR family n=1 Tax=C... 252 1e-65 UniRef50_UPI0001745DD5 transcriptional regulator, LysR family pr... 252 1e-65 UniRef50_B5YJV7 Transcriptional regulator n=1 Tax=Thermodesulfov... 252 1e-65 UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepI... 252 1e-65 UniRef50_P27111 HTH-type transcriptional regulator cynR n=108 Ta... 250 4e-65 UniRef50_B2T7R4 Transcriptional regulator, LysR family n=5 Tax=B... 250 4e-65 UniRef50_UPI00016C47B2 transcriptional regulator, LysR family pr... 249 8e-65 UniRef50_A0AXF9 Transcriptional regulator, LysR family n=9 Tax=B... 249 9e-65 UniRef50_C2BX95 Transcriptional regulator n=1 Tax=Listeria grayi... 249 1e-64 UniRef50_B2TGB5 Transcriptional regulator, LysR family n=2 Tax=B... 249 1e-64 UniRef50_C9KJ25 Transcriptional regulator GltC n=1 Tax=Mitsuokel... 248 1e-64 UniRef50_B9Y467 Putative uncharacterized protein n=1 Tax=Holdema... 247 3e-64 UniRef50_C3KMF5 Transcriptional regulator, LysR family n=42 Tax=... 246 5e-64 UniRef50_Q67SW7 LysR family transcriptional regulator n=1 Tax=Sy... 246 1e-63 UniRef50_Q126X0 Transcriptional regulator, LysR family n=4 Tax=P... 246 1e-63 UniRef50_A6SW66 Transcriptional regulator, LysR family n=1 Tax=J... 245 2e-63 UniRef50_Q141G8 Transcriptional regulator, LysR family n=6 Tax=B... 244 2e-63 UniRef50_Q4ZQQ6 Regulatory protein, LysR:LysR, substrate-binding... 244 2e-63 UniRef50_C4ZIH4 Transcriptional regulator, LysR family n=1 Tax=T... 244 2e-63 UniRef50_B8IWD6 Transcriptional regulator, LysR family n=1 Tax=M... 244 3e-63 UniRef50_B8K739 Transcriptional regulator, substrate-binding of ... 244 3e-63 UniRef50_UPI0001826865 hypothetical protein EcanA3_10858 n=1 Tax... 243 5e-63 UniRef50_B5JQV8 LysR substrate binding domain protein n=1 Tax=Ve... 243 5e-63 UniRef50_C7I3E5 Transcriptional regulator, LysR family n=1 Tax=T... 243 6e-63 UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=C... 243 8e-63 UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=C... 243 9e-63 UniRef50_A6W282 Transcriptional regulator, LysR family n=10 Tax=... 243 9e-63 UniRef50_C6XUT8 LysR substrate-binding n=1 Tax=Pedobacter hepari... 242 1e-62 UniRef50_D0ZGE3 DNA-binding transcriptional activator n=2 Tax=Ed... 242 1e-62 UniRef50_Q1IHL3 Transcriptional regulator, LysR family n=1 Tax=C... 241 2e-62 UniRef50_Q3JHY3 LysR-family transcriptional regulator n=44 Tax=B... 241 2e-62 UniRef50_A3V8N8 LysR-family transcriptional regulator n=1 Tax=Lo... 241 2e-62 UniRef50_B9Z0I5 Transcriptional regulator, LysR family n=1 Tax=L... 241 3e-62 UniRef50_A5V773 Transcriptional regulator, LysR family n=2 Tax=A... 241 3e-62 UniRef50_C1F7X5 Transcriptional regulator, LysR family n=1 Tax=A... 240 4e-62 UniRef50_B8KMT5 Transcriptional regulator, LysR family n=1 Tax=g... 240 5e-62 UniRef50_C9YBM2 Putative uncharacterized protein n=2 Tax=cellula... 240 5e-62 UniRef50_A4J1K6 Transcriptional regulator, LysR family n=1 Tax=D... 240 5e-62 UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=R... 240 6e-62 UniRef50_A6ULR6 Transcriptional regulator, LysR family n=1 Tax=S... 239 7e-62 UniRef50_B1Z4Z1 Transcriptional regulator, LysR family n=5 Tax=P... 239 8e-62 UniRef50_A9BN68 Transcriptional regulator, LysR family n=1 Tax=D... 239 8e-62 UniRef50_Q15NZ1 Transcriptional regulator, LysR family n=2 Tax=G... 239 9e-62 UniRef50_C1A9Z7 LysR family transcriptional regulator n=1 Tax=Ge... 239 9e-62 UniRef50_C0Z4V5 Transcriptional regulator n=1 Tax=Brevibacillus ... 239 9e-62 UniRef50_D1UCJ8 Transcriptional regulator, LysR family n=1 Tax=B... 239 1e-61 UniRef50_C4ST67 Transcriptional regulator, LysR family n=2 Tax=Y... 239 1e-61 UniRef50_A4XNT0 Transcriptional regulator, LysR family n=2 Tax=P... 239 1e-61 UniRef50_P52661 HTH-type transcriptional regulator gbpR n=1 Tax=... 238 1e-61 UniRef50_P52696 Uncharacterized HTH-type transcriptional regulat... 238 2e-61 UniRef50_A7ZNW2 Transcriptional regulator, LysR family n=40 Tax=... 238 2e-61 UniRef50_Q7WJM8 Probable LysR-family transcriptional regulator n... 237 3e-61 UniRef50_A3K7Z5 Regulatory protein, LysR:LysR, substrate-binding... 237 3e-61 UniRef50_Q39PG2 Transcriptional regulator, LysR family n=1 Tax=B... 237 3e-61 UniRef50_P25544 RuBisCO operon transcriptional regulator n=13 Ta... 237 3e-61 UniRef50_C3LMU4 Transcriptional regulator, LysR family n=65 Tax=... 237 3e-61 UniRef50_Q39P96 Transcriptional regulator, LysR family n=3 Tax=c... 237 4e-61 UniRef50_B2Q0Q6 Putative uncharacterized protein n=1 Tax=Provide... 237 4e-61 UniRef50_Q46NY0 Transcriptional regulator, LysR family n=1 Tax=R... 237 5e-61 UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=... 236 5e-61 UniRef50_Q4KE95 Transcriptional regulator, LysR family n=7 Tax=P... 236 5e-61 UniRef50_Q0K3Z3 Transcriptional regulator, LysR-family n=1 Tax=R... 236 6e-61 UniRef50_P94678 LysR type regulator of tsaMBCD n=1 Tax=Comamonas... 236 6e-61 UniRef50_B0RTV9 Transcriptional regulator, LysR family n=11 Tax=... 236 7e-61 UniRef50_C0Z7P7 Probable transcriptional regulator n=1 Tax=Brevi... 236 8e-61 UniRef50_Q0K1W4 Transcriptional regulator (Transcriptional regul... 236 9e-61 UniRef50_C1F961 Transcriptional regulator, LysR family n=1 Tax=A... 236 1e-60 UniRef50_Q1AYT0 Transcriptional regulator, LysR family n=1 Tax=R... 235 1e-60 UniRef50_Q1AVR3 Transcriptional regulator, LysR family n=1 Tax=R... 235 1e-60 UniRef50_A4ISN4 Transcriptional regulator LysR family n=6 Tax=Ge... 234 2e-60 UniRef50_D0IX04 Transcriptional regulator, LysR family n=1 Tax=C... 234 3e-60 UniRef50_A4BGZ4 Transcriptional regulator, LysR family protein n... 234 3e-60 UniRef50_C3X7G6 Transcriptional regulator n=2 Tax=Oxalobacter fo... 233 4e-60 UniRef50_D0D0K4 Transcriptional regulator n=1 Tax=Citreicella sp... 233 5e-60 UniRef50_B4WMZ4 Putative uncharacterized protein n=1 Tax=Synecho... 233 5e-60 UniRef50_A8GER4 Transcriptional regulator, LysR family n=2 Tax=S... 233 6e-60 UniRef50_Q5X4A2 Hydrogen peroxide-inducible genes activator n=4 ... 233 6e-60 UniRef50_C8WSN1 Transcriptional regulator, LysR family n=1 Tax=A... 233 6e-60 UniRef50_UPI0001744D79 transcriptional regulator, LysR family pr... 233 7e-60 UniRef50_Q11H84 Transcriptional regulator, LysR family n=1 Tax=C... 232 7e-60 UniRef50_B8IVL1 Transcriptional regulator, LysR family n=2 Tax=P... 232 7e-60 UniRef50_A9AQ38 LysR family transcriptional regulator n=7 Tax=Pr... 232 7e-60 UniRef50_Q2T4S2 Transcriptional regulator, LysR family, putative... 232 8e-60 UniRef50_P0A4T6 HTH-type transcriptional regulator pcaQ n=10 Tax... 232 8e-60 UniRef50_B2UBD9 Transcriptional regulator, LysR family n=8 Tax=B... 232 8e-60 UniRef50_A9WIA6 LysR substrate-binding n=4 Tax=Chloroflexaceae R... 232 9e-60 UniRef50_Q1ATU8 Transcriptional regulator, LysR family n=1 Tax=R... 232 9e-60 UniRef50_P77171 Uncharacterized HTH-type transcriptional regulat... 232 9e-60 UniRef50_UPI000178A79D transcriptional regulator, LysR family n=... 232 1e-59 UniRef50_B1FSS9 Transcriptional regulator, LysR family n=1 Tax=B... 232 1e-59 UniRef50_A9B3V4 Transcriptional regulator, LysR family n=1 Tax=H... 232 1e-59 UniRef50_Q1GJ71 Transcriptional regulator, LysR family n=1 Tax=R... 231 2e-59 UniRef50_B5JLL8 Putative uncharacterized protein n=1 Tax=Verruco... 231 2e-59 UniRef50_A4BGW9 Transcriptional regulator n=1 Tax=Reinekea bland... 231 3e-59 UniRef50_B1Z3Z1 Transcriptional regulator, LysR family n=16 Tax=... 231 3e-59 UniRef50_B2JVU4 Transcriptional regulator, LysR family n=43 Tax=... 231 3e-59 UniRef50_A9AT28 LysR family transcriptional regulator n=9 Tax=Bu... 231 3e-59 UniRef50_UPI0001C3125C transcriptional regulator, LysR family n=... 230 4e-59 UniRef50_B3JNA3 Putative uncharacterized protein n=1 Tax=Bactero... 230 5e-59 UniRef50_Q7W9G9 Probable LysR-family transcriptional regulator n... 230 5e-59 UniRef50_B5ZQW7 Transcriptional regulator, LysR family n=18 Tax=... 230 5e-59 UniRef50_C4ZKY3 Transcriptional regulator, LysR family n=2 Tax=B... 230 6e-59 UniRef50_P52686 SDS degradation transcriptional activation prote... 230 6e-59 UniRef50_A3K824 Transcriptional regulator, LysR family protein n... 229 7e-59 UniRef50_A3VLR4 Putative LysR family transcriptional regulator n... 229 8e-59 UniRef50_Q46R60 Regulatory protein, LysR:LysR, substrate-binding... 229 9e-59 UniRef50_Q0BF95 Transcriptional regulator, LysR family n=3 Tax=B... 229 9e-59 UniRef50_B9KUK0 Transcriptional regulator n=2 Tax=Rhodobacterace... 229 9e-59 UniRef50_C4ZM05 Transcriptional regulator, LysR family n=1 Tax=T... 229 9e-59 UniRef50_B9JGZ8 Transcriptional regulator (Activator) protein n=... 229 1e-58 UniRef50_A8IAC4 Transcriptional regulator n=1 Tax=Azorhizobium c... 229 1e-58 UniRef50_Q2RHG4 Transcriptional regulator, LysR family n=1 Tax=M... 229 1e-58 UniRef50_C5CPN7 Transcriptional regulator, LysR family n=1 Tax=V... 228 2e-58 UniRef50_D0J615 Transcriptional regulator, LysR family n=2 Tax=C... 228 2e-58 UniRef50_A4XPG0 Transcriptional regulator, LysR family n=1 Tax=P... 228 2e-58 UniRef50_C6D4H5 Transcriptional regulator, LysR family n=4 Tax=B... 228 2e-58 UniRef50_A9BVL3 Transcriptional regulator, LysR family n=3 Tax=C... 228 2e-58 UniRef50_UPI00004DBCAD UPI00004DBCAD related cluster n=2 Tax=Xen... 227 3e-58 UniRef50_A4YQI9 Transcriptional regulator of protochatechuate de... 227 3e-58 UniRef50_Q221U4 Transcriptional regulator, LysR family n=2 Tax=C... 227 3e-58 UniRef50_A5VC48 Transcriptional regulator, LysR family n=1 Tax=S... 227 4e-58 UniRef50_Q12CP1 Transcriptional regulator, LysR family n=1 Tax=P... 227 5e-58 UniRef50_A7IIT4 Transcriptional regulator, LysR family n=1 Tax=X... 226 6e-58 UniRef50_Q127N6 Transcriptional regulator, LysR family n=1 Tax=P... 226 6e-58 UniRef50_C4KR89 Transcriptional regulator, LysR family n=67 Tax=... 226 6e-58 UniRef50_Q11BY5 Transcriptional regulator, LysR family n=1 Tax=C... 226 7e-58 UniRef50_B1Y5W5 Transcriptional regulator, LysR family n=2 Tax=B... 226 8e-58 UniRef50_C1XNG0 Transcriptional regulator, COG0583 n=2 Tax=Meiot... 226 8e-58 UniRef50_B4CXF3 Transcriptional regulator, LysR family n=1 Tax=C... 226 8e-58 UniRef50_A0AYH9 Transcriptional regulator, LysR family n=148 Tax... 226 9e-58 UniRef50_B1J4U2 Transcriptional regulator, LysR family n=2 Tax=P... 226 9e-58 UniRef50_A1WHL2 Transcriptional regulator, LysR family n=10 Tax=... 226 1e-57 UniRef50_C5SQ96 Transcriptional regulator, LysR family n=1 Tax=A... 226 1e-57 UniRef50_B7V886 Probable transcriptional regulator n=7 Tax=Pseud... 226 1e-57 UniRef50_Q1YDL8 Transcriptional regulator, LysR family n=1 Tax=A... 225 1e-57 UniRef50_A6UB72 Transcriptional regulator, LysR family n=1 Tax=S... 225 1e-57 UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Sy... 225 1e-57 UniRef50_Q129P4 Transcriptional regulator, LysR family n=17 Tax=... 225 2e-57 UniRef50_D1TFB5 Transcriptional regulator-like protein n=1 Tax=B... 225 2e-57 UniRef50_Q28M96 Transcriptional regulator, LysR family n=3 Tax=R... 225 2e-57 UniRef50_Q2G7Q5 Transcriptional regulator, LysR family n=1 Tax=N... 225 2e-57 UniRef50_A1TN88 Transcriptional regulator, LysR family n=9 Tax=B... 224 2e-57 UniRef50_A1B7R5 Transcriptional regulator, LysR family n=10 Tax=... 224 2e-57 UniRef50_Q1YUG7 Transcriptional regulator n=1 Tax=gamma proteoba... 224 2e-57 UniRef50_B1YXM2 Transcriptional regulator, LysR family n=3 Tax=B... 224 3e-57 UniRef50_C1DSG7 Transcriptional regulator, LysR family n=1 Tax=A... 224 3e-57 UniRef50_D1XD01 Transcriptional regulator, LysR family n=1 Tax=S... 224 3e-57 UniRef50_A1WHM4 Transcriptional regulator, LysR family n=1 Tax=V... 224 3e-57 UniRef50_Q4KGI4 Transcriptional regulator, LysR family n=8 Tax=B... 224 3e-57 UniRef50_UPI000174499E transcriptional regulatory protein, LysR ... 224 3e-57 UniRef50_A9WDF5 LysR substrate-binding n=3 Tax=Chloroflexus RepI... 224 4e-57 UniRef50_Q1N6N4 Transcriptional regulator, LysR family protein n... 223 5e-57 UniRef50_Q475G5 Regulatory protein, LysR:LysR, substrate-binding... 223 6e-57 UniRef50_C1DIH6 LysR family transcriptional regulator protein n=... 223 6e-57 UniRef50_A6F002 Transcriptional regulator, LysR family protein n... 223 6e-57 UniRef50_B5GYU9 LysR-family transcriptional regulator (Fragment)... 223 6e-57 UniRef50_A9AUC8 Transcriptional regulator, LysR family n=2 Tax=C... 222 8e-57 UniRef50_Q46NS6 Transcriptional regulator, LysR family n=6 Tax=B... 222 1e-56 UniRef50_A6W290 Transcriptional regulator, LysR family n=2 Tax=G... 222 1e-56 UniRef50_A5W321 Transcriptional regulator, LysR family n=3 Tax=P... 222 1e-56 UniRef50_A3K882 Transcriptional regulator, LysR family, putative... 222 1e-56 UniRef50_D2QVQ4 Transcriptional regulator, LysR family n=22 Tax=... 222 1e-56 UniRef50_A1WN33 Transcriptional regulator, LysR family n=1 Tax=V... 222 1e-56 UniRef50_B1Z1E9 Transcriptional regulator, LysR family n=50 Tax=... 222 2e-56 Sequences not found previously or not previously below threshold: UniRef50_P39592 Uncharacterized HTH-type transcriptional regulat... 263 5e-69 UniRef50_P20668 HTH-type transcriptional regulator gltC n=17 Tax... 253 5e-66 UniRef50_C6J455 LysR family transcriptional regulator n=2 Tax=Ba... 251 3e-65 UniRef50_UPI00016945AE hypothetical protein Plarl_07755 n=1 Tax=... 249 7e-65 UniRef50_C0ZI27 Transcriptional regulator n=1 Tax=Brevibacillus ... 249 1e-64 UniRef50_C6CYG5 Transcriptional regulator, LysR family n=2 Tax=P... 248 2e-64 UniRef50_Q3AG03 Transcriptional regulator, LysR family n=2 Tax=C... 247 4e-64 UniRef50_C0ZCK2 Transcriptional regulator n=1 Tax=Brevibacillus ... 245 1e-63 UniRef50_P37499 Uncharacterized HTH-type transcriptional regulat... 243 7e-63 UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Prote... 242 1e-62 UniRef50_C0Z518 Transcriptional regulator n=3 Tax=Paenibacillace... 240 4e-62 UniRef50_Q46MA3 Transcriptional regulator, LysR family n=1 Tax=R... 239 8e-62 UniRef50_C6D0W9 Transcriptional regulator, LysR family n=1 Tax=P... 239 9e-62 UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax... 238 2e-61 UniRef50_B9XBB1 Transcriptional regulator, LysR family n=2 Tax=V... 238 2e-61 UniRef50_P0ACQ6 Hydrogen peroxide-inducible genes activator n=27... 237 5e-61 UniRef50_Q04778 HTH-type transcriptional regulator alsR n=87 Tax... 237 5e-61 UniRef50_B9XJ57 Transcriptional regulator, LysR family n=2 Tax=b... 236 8e-61 UniRef50_Q12AP3 Transcriptional regulator, LysR family n=4 Tax=B... 236 8e-61 UniRef50_C6BXQ9 Transcriptional regulator, LysR family n=1 Tax=D... 236 9e-61 UniRef50_A3I8L6 Transcriptional regulator, LysR family protein n... 235 1e-60 UniRef50_D1VD43 Transcriptional regulator, LysR family n=1 Tax=F... 235 1e-60 UniRef50_A4F7Y9 Transcriptional regulator, LysR family n=3 Tax=A... 235 2e-60 UniRef50_A0KPQ5 Transcriptional regulator n=1 Tax=Aeromonas hydr... 234 2e-60 UniRef50_Q65GU9 Transcriptional regulator YbbE n=2 Tax=Bacillus ... 234 3e-60 UniRef50_Q2J7C4 Transcriptional regulator, LysR family n=22 Tax=... 234 4e-60 UniRef50_Q1IRM1 Transcriptional regulator, LysR family n=1 Tax=C... 234 4e-60 UniRef50_Q5WCI6 LysR family transcriptional activator of glutama... 233 5e-60 UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=ma... 233 6e-60 UniRef50_B5XVV4 Transcriptional regulator cynR n=5 Tax=Enterobac... 232 7e-60 UniRef50_Q3M2K4 Transcriptional regulator, LysR family n=5 Tax=C... 231 2e-59 UniRef50_B8DKN9 Transcriptional regulator, LysR family n=4 Tax=P... 231 2e-59 UniRef50_C1ZI46 Transcriptional regulator, COG0583 n=1 Tax=Planc... 231 3e-59 UniRef50_C8WUA0 Transcriptional regulator, LysR family n=1 Tax=A... 231 3e-59 UniRef50_B1ZUQ0 Transcriptional regulator, LysR family n=1 Tax=O... 231 3e-59 UniRef50_C1PEC2 Transcriptional regulator, LysR family n=1 Tax=B... 230 4e-59 UniRef50_A1WVW1 Transcriptional regulator, LysR family n=11 Tax=... 229 8e-59 UniRef50_Q1AUB8 Transcriptional regulator, LysR family n=2 Tax=B... 229 8e-59 UniRef50_C5BDD2 HTH-type transcriptional regulator AlsR n=2 Tax=... 229 8e-59 UniRef50_A6VSP2 Transcriptional regulator, LysR family n=1 Tax=M... 229 1e-58 UniRef50_C7I2X4 Transcriptional regulator, LysR family n=1 Tax=T... 229 1e-58 UniRef50_P77559 Uncharacterized HTH-type transcriptional regulat... 229 1e-58 UniRef50_UPI0001C3192A transcriptional regulator, LysR family n=... 229 1e-58 UniRef50_Q46WQ0 Transcriptional regulator, LysR family n=1 Tax=R... 228 2e-58 UniRef50_Q4ZY05 Regulatory protein, LysR:LysR, substrate-binding... 228 2e-58 UniRef50_A0LNI4 Transcriptional regulator, LysR family n=4 Tax=D... 228 2e-58 UniRef50_B5ELK2 Transcriptional regulator, LysR family n=2 Tax=A... 228 2e-58 UniRef50_C1DGS2 Transcriptinal regulator, LysR family n=1 Tax=Az... 227 2e-58 UniRef50_Q21IY2 Transcriptional regulator, LysR family n=2 Tax=G... 227 3e-58 UniRef50_C0ZI31 Transcriptional regulator n=1 Tax=Brevibacillus ... 227 3e-58 UniRef50_C5BQI4 Transcriptional regulator, LysR family n=1 Tax=T... 227 4e-58 UniRef50_C1M4D9 Putative uncharacterized protein n=2 Tax=Citroba... 227 4e-58 UniRef50_Q2T940 Transcriptional regulator, LysR family n=6 Tax=B... 227 5e-58 UniRef50_C5BEX8 Transcriptional regulator, LysR family n=12 Tax=... 227 5e-58 UniRef50_C6D9U9 Transcriptional regulator, LysR family n=1 Tax=P... 226 7e-58 UniRef50_C1BAS4 Putative LysR family transcriptional regulator n... 225 1e-57 UniRef50_B9TDR3 HTH-type transcriptional regulator xapR, putativ... 225 1e-57 UniRef50_A0JW92 Transcriptional regulator, LysR family n=3 Tax=M... 225 2e-57 UniRef50_Q7W708 Putative LysR-family transcriptional regulator n... 225 2e-57 UniRef50_A4FE82 LysR-family transcriptional regulator n=5 Tax=Ac... 225 2e-57 UniRef50_Q7WNC1 LysR-family transcriptional regulator n=1 Tax=Bo... 224 3e-57 UniRef50_C4L1Y9 Transcriptional regulator, LysR family n=2 Tax=E... 224 3e-57 UniRef50_Q47141 Hca operon transcriptional activator n=46 Tax=Ga... 224 3e-57 UniRef50_A0R3Z8 Transcriptional regulator, LysR family protein n... 224 4e-57 UniRef50_C8WV81 Transcriptional regulator, LysR family n=2 Tax=A... 224 4e-57 UniRef50_A9F7Y4 Transcriptional regulator, LysR family n=1 Tax=S... 224 4e-57 UniRef50_B5WR38 Transcriptional regulator, LysR family n=2 Tax=B... 224 4e-57 UniRef50_C6IVL6 Transcriptional regulator YwqM n=1 Tax=Paenibaci... 223 6e-57 UniRef50_A6UMN5 Transcriptional regulator, LysR family n=1 Tax=S... 222 1e-56 UniRef50_B8IJK2 Transcriptional regulator, LysR family n=1 Tax=M... 222 1e-56 UniRef50_A7IMC0 Transcriptional regulator, LysR family n=18 Tax=... 222 1e-56 >UniRef50_P77744 HTH-type transcriptional regulator abgR n=48 Tax=Enterobacteriaceae RepID=ABGR_ECOLI Length = 302 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 302/302 (100%), Positives = 302/302 (100%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT Sbjct: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ Sbjct: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP Sbjct: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 Query: 181 AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF Sbjct: 181 AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL Sbjct: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 Query: 301 QS 302 QS Sbjct: 301 QS 302 >UniRef50_D0YA85 Transcriptional regulator, LysR family n=5 Tax=Klebsiella RepID=D0YA85_KLEVA Length = 308 Score = 341 bits (875), Expect = 2e-92, Method: Composition-based stats. Identities = 218/296 (73%), Positives = 255/296 (86%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 MAFQ+K H IRAFVEVAR+GSIRGASR L +SQPAL+K+I+ELEEGL+AQLF RRS+GV Sbjct: 7 MAFQIKFHHIRAFVEVAREGSIRGASRALAVSQPALTKAIKELEEGLSAQLFVRRSQGVA 66 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT+ GESFYQHASLILEELRAAQ+++ QRQG+ AGQINIG+GAS++RSLMP+VI RFHQQ Sbjct: 67 LTENGESFYQHASLILEELRAAQDELLQRQGEQAGQINIGLGASVARSLMPSVICRFHQQ 126 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 HPQVKVRIMEGQL++MINELRQGELDFTINTYY GPYDHEF+FEKL EK FA+F R GHP Sbjct: 127 HPQVKVRIMEGQLLAMINELRQGELDFTINTYYPGPYDHEFSFEKLFEKPFAVFARAGHP 186 Query: 181 AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 A A S+ +L+D+ WTMPTP GSY+KQL + L+ P+V +VCETFS+CISLV KSDF Sbjct: 187 AAQATSLGELMDHHWTMPTPRGSYFKQLQDRLNQAGLAPKVDIVCETFSSCISLVVKSDF 246 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 LS LP E+G DPL LVM+PV ++LP A YYLIQRRD+RQTPLTASLIT FRR+ Sbjct: 247 LSILPVELGNDPLMADKLVMIPVRDVLPTATYYLIQRRDTRQTPLTASLITLFRRQ 302 >UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=Bacillales RepID=A9VF88_BACWK Length = 305 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 72/301 (23%), Positives = 133/301 (44%), Gaps = 5/301 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 +++ Q+ F+ V+++ A+ LN+SQP+LS+ I+ LE + LF R K ++LT Sbjct: 7 ISIELRQLEYFLAVSKELHFTRAAEKLNISQPSLSQQIRALEHEVGMPLFDRIGKKISLT 66 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 +AG H+ I E+ A+ I+ G G + IG ++ L+P I F++Q+P Sbjct: 67 EAGRVLLSHSKTIFHEVEQARSAIQDLNGLHHGSLTIGSLLTVVNYLLPPAILDFNKQYP 126 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 +++ ++ + + +L Q ELD I D E L + + + H Sbjct: 127 NIELSVLGLRTGEIREKLLQNELDIGITFL--PVQDKEIVSIPLYKSELTLVVPTSHSLT 184 Query: 183 GAR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + SI++L DY + + + ++ + P+ + T + I +VA+ Sbjct: 185 ERKYVSIEELQDYPLILLPKNFYLTELITSHCQNFNFKPKPILEISTMESLIQMVAQGMG 244 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 ++ LP+ D L + + + + P LI RRD T I Q + L Sbjct: 245 ITVLPKPYI-DFLQNEHIQAIKIENPTPTIDIGLIYRRDKYMCAATRKFIEQLKITVHSL 303 Query: 301 Q 301 Q Sbjct: 304 Q 304 >UniRef50_Q46UX6 Transcriptional regulator, LysR family n=4 Tax=Cupriavidus RepID=Q46UX6_RALEJ Length = 332 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 100/299 (33%), Positives = 156/299 (52%), Gaps = 3/299 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ QI+ F+ VA GSIR A+R ++S PAL+KSI++LE+ L L R ++GV L+ Sbjct: 4 MRLSQIQDFIAVAEGGSIRAAARTRDVSAPALTKSIRQLEDELHVPLLTRTTRGVVLSHY 63 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+F + A LI E R A E++ Q G G + IG+ + L+PA ++RF +QHP+V Sbjct: 64 GEAFLRRARLIATEARRATEEMTQMLGARTGTVRIGVTGGPAHLLLPAALNRFRRQHPEV 123 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V I G+ + +LR G +D ++ DH+F E L + HP A Sbjct: 124 QVYIDSGRSAVHLQDLRAGLIDVAVSPIPDEGIDHDFICEPLYNNDSVVVAHQDHPLRHA 183 Query: 185 RSIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 R++++L+ W + T HG + P+V V C+TF+ +L+ L Sbjct: 184 RTLRELVGSEWILTTCRMHGPGAAIMDAFRAQDLPLPRVAVRCDTFNLIQALLQNRRLLC 243 Query: 243 KLPEEMGCDPL-HGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 + ++ D + GL +LP+ + LP LI R DS P+ AS Q RRE YL Sbjct: 244 MVARQLMQDRVGASTGLAVLPIEDPLPSHTVCLIYRADSPMPPVVASFAAQLRREAHYL 302 >UniRef50_P39592 Uncharacterized HTH-type transcriptional regulator ywbI n=9 Tax=Bacillales RepID=YWBI_BACSU Length = 301 Score = 263 bits (673), Expect = 5e-69, Method: Composition-based stats. Identities = 62/290 (21%), Positives = 122/290 (42%), Gaps = 5/290 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I + F+EVAR S AS+ L +SQP +SK I+ LEE L +LF+R + V LTDA Sbjct: 1 MDIRHLTYFLEVARLKSFTKASQSLYVSQPTISKMIKNLEEELGIELFYRNGRQVELTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G S Y A I++ + ++ G + IG+ I P V+ F + +P V Sbjct: 61 GHSMYVQAQEIIKSFQNLTSELNDIMEVKKGHVRIGLPPMIGSGFFPRVLGDFRENYPNV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +++E + + + G LD + + F ++++ + P H Sbjct: 121 TFQLVEDGSIKVQEGVGDGSLDIGVVVL--PANEDIFHSFTIVKETLMLVVHPSHRLADE 178 Query: 185 RS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + +++L D + + ++ P + + +V+ + + Sbjct: 179 KECQLRELKDEPFIFFREDFVLHNRIMTECIKAGFRPHIIYETSQWDFISEMVSANLGIG 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQ 292 LPE + C L + + ++P+ + + +I R+D + + + Sbjct: 239 LLPERI-CRGLDPEKVKVIPLVDPVIPWHLAIIWRKDRYLSFAARAWLEH 287 >UniRef50_B5JN19 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JN19_9BACT Length = 296 Score = 263 bits (672), Expect = 7e-69, Method: Composition-based stats. Identities = 82/298 (27%), Positives = 144/298 (48%), Gaps = 4/298 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ QIR+F VA + R A+ LN++QPALS +++LEE L QLF R +GV LTDA Sbjct: 1 MELRQIRSFRVVAAEEHFRRAAEKLNIAQPALSLQVRQLEEELGTQLFERVGRGVRLTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G F+ +A I+ + + E R+ + G++ IG+ + + PAVIS F +++PQV Sbjct: 61 GSLFWDYADRIVSLVDESAEATREHSDLIRGRLRIGIAQTPNCCFGPAVISAFKRRYPQV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 V + E + + L +GELD I + + E + E++F GHP Sbjct: 121 FVSLAELAADEIESSLLKGELDLGIG--FGPCDSPNLSSESIYEERFVALAPRGHPWFNK 178 Query: 185 R--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + S+K L + T + + DD + +V + T I+ + + S Sbjct: 179 KNISLKTLAQEELILLTRDYCTRRIFEKTCDDLDVSLKVAIEMNTIEGIIASLESTGLAS 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 LP ++ PL L +P+++ + L+ R+ +P ++ T+++ L Sbjct: 239 VLPAQIVNSPLMSPTLRSVPIAQPGIRRKVALVYRKSGYLSPAAHAMATEWKTLAKSL 296 >UniRef50_Q1IRZ3 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRZ3_ACIBL Length = 296 Score = 259 bits (664), Expect = 7e-68, Method: Composition-based stats. Identities = 71/296 (23%), Positives = 130/296 (43%), Gaps = 7/296 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++HQ+R F VAR G+ AS + +++QP+LS+ I +LE L A+LF R + LT Sbjct: 1 MEVHQLRYFCAVARHGTFTRASEVEHVAQPSLSQQILKLEAELGARLFDRLPRSAKLTVF 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++F +A IL +L A+ ++ + G++ +G+ +I+ L+P +++ +HP V Sbjct: 61 GKAFLPNAERILRQLDEAKTELLEMTSNEKGEVTVGIIPTIAAYLLPKLLNGLSVRHPDV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 V+I E ++ L G +D I E E+L E++F H Sbjct: 121 TVKISEDITPVLLQRLHDGSIDMAIAALPIP--GTELASEELFEEKFYAVLPEKHRRASR 178 Query: 185 R--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 S+ L + + + + + A +P V F+ +++V+ +S Sbjct: 179 ASISLADLNREPFLLLKEGHCFRDSVIAACNQAAMSPSVVFESGQFATILAMVSAGMGVS 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 +P G +P+S ++ R Q L+ Q R CG Sbjct: 239 AVPAMAVQ---PHPGCKFIPISGKHSSRKVGIVTSRHHFQGRAQRLLLKQMRDACG 291 >UniRef50_A9WGB3 LysR substrate-binding n=2 Tax=Chloroflexus RepID=A9WGB3_CHLAA Length = 304 Score = 257 bits (657), Expect = 4e-67, Method: Composition-based stats. Identities = 71/292 (24%), Positives = 126/292 (43%), Gaps = 7/292 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+R F+ VA +G I A+ L +SQPALS+ I+ LEE + LF R + + LT A Sbjct: 1 MELRQLRYFLAVAEEGHITRAAEKLYISQPALSQQIKLLEEEIGTVLFDRIGRRIRLTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE HA L+EL AQ I + G G + IG+ +++ LMP +++ F +P + Sbjct: 61 GEILVAHARRALQELSEAQVAIDELNGLQRGMLRIGVVQTVNAYLMPDLVAAFTNAYPAI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG- 183 ++I E + L G+L I P T E+L + + HP Sbjct: 121 SLQIEELATRDIEQRLADGDLQIGIGFV--PPETAGVTGEELFSEDLVVVVSRQHPWADL 178 Query: 184 -ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++ L + + + P+V + T + ++ V + + Sbjct: 179 PQLPVQSLHQQPLILLSTTFCTRRLWDRCTHIAGIQPRVQIEMNTIGSILAAVRQLTLAT 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 LP + LV +P+ + P+ L+ R ++ + T + + R Sbjct: 239 VLPAMVLSGQ---PDLVGIPLVDPTPRRTVGLLFRHNAYRCAATRAFVAMTR 287 >UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CY97_PAESJ Length = 305 Score = 256 bits (655), Expect = 6e-67, Method: Composition-based stats. Identities = 76/299 (25%), Positives = 139/299 (46%), Gaps = 4/299 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+ FV+VA++ + A+ L+++Q A+S+ I +LEE L +LF ++ + + LT Sbjct: 1 MELRQLYYFVKVAKKEHVTQAAEELHVAQSAVSRQIHQLEEELGVKLFLQKGRNLQLTPV 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F + A +IL++L A +I + G+I +G S+ S++P V++ F + HP V Sbjct: 61 GQLFLKRAEVILDDLERAVVEIHEFMDPEKGEIRLGFPHSLGVSVVPQVVAAFRKLHPNV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 K R +G S+I ++ +GE+D + + ++ E LL ++ P HP G Sbjct: 121 KFRFRQGMYPSLIRDMVKGEIDLAFISPFPDEHEQ-VCGEVLLTEELFAILPPSHPLAGE 179 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + I QL + ++ M + S + E + TP++G E LVA +S Sbjct: 180 QEIDLIQLKEDTFVMFSEGYSLRPIVWEACQEAGFTPKIGFEGEETETIRGLVAAGMGVS 239 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQ 301 LPE Q + V +I R + + + R L+ Sbjct: 240 LLPEMALYHAGVLQS-AKVRVRTPNVTRNIGIIHRSNEKMPLVAKVFHGFLLRYFNELE 297 >UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=Geobacter RepID=B5EGJ2_GEOBB Length = 300 Score = 256 bits (654), Expect = 9e-67, Method: Composition-based stats. Identities = 69/297 (23%), Positives = 129/297 (43%), Gaps = 8/297 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + Q+R F+EVA+ + A+ L+++QPA+S ++++LE+ L LF R+ K V+LT Sbjct: 1 MDVRQLRYFIEVAKVKNFTKAAEALHIAQPAVSMAVKKLEQELELSLFNRQDKKVSLTAE 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE F HA IL++LRAA+ ++ + +G G++ +G+ IS P +I F + +PQ+ Sbjct: 61 GEIFLPHAKRILDDLRAAELEMAELKGLSKGEVRLGIPPMISAYFFPDIIRDFKKSYPQL 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + ++ + + QGELD + P + L ++ I P HP Sbjct: 121 HLSVLGEGAWRIQKMIGQGELDMGVVAGGNFP--ETLEVRRFLREEIVICVPPDHPFAQR 178 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 +S+ + + + E+L P + FS SLV +S Sbjct: 179 KSVSLVEFIREPLVFYKEGYYIREFFLEVLKGAGSAPNIVFETNLFSLVKSLVRNGTGIS 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 + LV +P L + ++D+ + + + + Sbjct: 239 IFLRMVVA---ADTDLVAVPFDPPL-HLDLLIAWKKDTYLSLANRAFVDFLLQHAAE 291 >UniRef50_B7RS97 Transcriptional regulator, LysR family n=1 Tax=Roseobacter sp. GAI101 RepID=B7RS97_9RHOB Length = 302 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 89/296 (30%), Positives = 151/296 (51%), Gaps = 1/296 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K +Q+R FV VA GS+R ASR L ++QPA+++SIQELE L AQLF R ++GV LT Sbjct: 1 MKFNQLRDFVAVAEAGSLRAASRRLELAQPAITRSIQELENSLGAQLFIRGARGVRLTPV 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G F A +LEE+R A E++ Q QG G + +G+ + ++ V+ F +++P+V Sbjct: 61 GMVFLVRARNVLEEVRRAGEEVSQIQGSAEGNLVVGLSIAGHMGVLERVLRPFIRRYPRV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ ++EG L ++ +EL G +DF I + E KL + + + R HP + Sbjct: 121 RLHVIEGFLPTLESELLAGTVDFFIGPVSEDIVTPELDVSKLFDNERLVIARRDHPRSAS 180 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLVAKSDFLSK 243 RS+ L D W + +LS + + P++ C++ + ++ + +D L+ Sbjct: 181 RSLSDLNDVDWLTTSITHDAKDELSAVFAEHGLPPPRLIAKCQSALSILTFLMSTDMLAM 240 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 +P + PL L+ P+ E L+ R+ TP +T R+ Sbjct: 241 VPRQWVESPLMKDLLIPFPLKERFGAPPICLVHRKGLGLTPAAEHFVTLVRKASSA 296 >UniRef50_B2T4Q8 Transcriptional regulator, LysR family n=3 Tax=Burkholderia RepID=B2T4Q8_BURPP Length = 310 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 100/296 (33%), Positives = 150/296 (50%), Gaps = 1/296 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K +Q+RA V +A+ GSIR A++ + +SQPAL+K+I+E E+ L L R ++G LT Sbjct: 1 MKYNQLRALVAIAQHGSIRAAAKTVCLSQPALTKAIREFEQELGVPLVTRSARGAQLTQY 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++ Y A LIL E++ A++D+ GQ G ++ + +S + I F Q+ P+ Sbjct: 61 GQAVYTRAKLILAEMQHAKDDVVLLSGQEGGTVSCAVTPLVSLKYLSRAIHTFRQRMPKT 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + EG L + + LR G LDF I + EF F LLE + I R HP A Sbjct: 121 RLSVQEGFLTAALARLRDGSLDFVIAIVDEKKLAPEFMFRSLLECELIISARKAHPLANA 180 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAKSDFLSK 243 RSI L W + T S + L + T P+V V C +FSA SL S+ LS Sbjct: 181 RSIADLEGADWMLNTTPESIGQSLQDFFVQHGATAPRVVVECSSFSASFSLSVNSNLLSC 240 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 P+ + +V +PV E LP+ + +I RRD+ T LI F Sbjct: 241 CPKSFLETDWIRERIVSVPVRETLPRVSVGIISRRDALNTSACDYLIDCFVEAVAS 296 >UniRef50_C3KNJ1 Putative transcriptional regulator, LysR-type n=1 Tax=Rhizobium sp. NGR234 RepID=C3KNJ1_RHISN Length = 303 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 101/292 (34%), Positives = 152/292 (52%), Gaps = 1/292 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ I+AF+ VA GSIR A+ LN+SQPALSK+IQELEE L+A L+ R + G T+ Sbjct: 2 IQLRHIKAFLAVADTGSIRTAALRLNVSQPALSKTIQELEEILSAPLYTRSAHGSMPTEF 61 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +F A +I E AQE+I Q G G++ +G+ A S + + RF +++P V Sbjct: 62 GRAFLHRARIIDTEFSRAQEEISQMVGAKGGKVAVGLSAIASMLMASQALERFWKKNPNV 121 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 VRI +G L ++ +RQGE DF + H+ T E L E + R GHP A Sbjct: 122 NVRISDGLLDRLVGGVRQGEFDFAVGGVPPSSLGHDLTIEPLFENRIVPVVRVGHPLADA 181 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLVAKSDFLSK 243 RS+K L +W ++ +++ D P+V + CE+FSA + ++ +D ++ Sbjct: 182 RSLKDLARANWLYTNDQPAFMALMNQHFVDHGVPPPRVLLTCESFSAVLDILPSTDLVAA 241 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 LP PL +V L + L+ R TPL ASL FR+ Sbjct: 242 LPRSCLTHPLVRARMVGLALDGGGSHTMVGLVTRAGVPLTPLAASLAKAFRQ 293 >UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Bacillales RepID=C6IV95_9BACL Length = 305 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 74/287 (25%), Positives = 136/287 (47%), Gaps = 4/287 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q++ FV+VAR+ + A+ L+++Q A+S+ I +LE+ L LF ++ + + LT Sbjct: 1 MELRQLQYFVKVARKEHVTQAAEELHVAQSAVSRQIHQLEQELGVNLFMQKGRNLHLTAV 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F +IL++L A ++ + G+I +G S+ ++P+V++ F + +P V Sbjct: 61 GQLFCSRVEMILKDLDRAVSEVHEFLDPEQGEIRLGFPNSLGIHMIPSVVAEFRKLYPNV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 K R +G ++I ++ GE+D + + +D T +L + PGHP G Sbjct: 121 KFRFRQGTYPTLIRDVVSGEVDLAFISPFPENHDQ-VTGNVVLTEDLVAILPPGHPLAGE 179 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 +SIK QL D + + + S + + TP++ E LVA +S Sbjct: 180 QSIKLSQLKDEKFILFSKGYSLRPIVWHACLEAGFTPKIAFEGEETDTIRGLVAAGMGVS 239 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASL 289 LPE Q + + +SE LI R D + + S Sbjct: 240 LLPEMALFQSFTLQPIRVR-ISEPKVTRTIGLIHRVDEKLPLVAQSF 285 >UniRef50_D2P368 Transcription activator of glutamate synthase operon GltC n=18 Tax=Listeria RepID=D2P368_LISMO Length = 295 Score = 253 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 66/287 (22%), Positives = 130/287 (45%), Gaps = 4/287 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q++ F+EVAR + AS L+++Q A+S+ I +LEE L LF R + + LT Sbjct: 1 MELRQLKYFMEVARVEHMTKASENLHVAQSAVSRQITKLEEELGVHLFDRVGRNMQLTSV 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F + A++ L EL+ A+ + + G + +G+ S+S ++P+VIS F +++PQ+ Sbjct: 61 GQDFLKQAAIALNELQKAEALVTEYTDPAKGTVRVGLPNSLSTKVLPSVISTFREKYPQI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG- 183 + MEG + L G LD T + + +++ + HP Sbjct: 121 TYQFMEGTNEELTEMLLSGVLDMTF-LSPVPESSEQIEAIRFFDEKLKLIVPKTHPLAEN 179 Query: 184 -ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 S+K+L + + YK +++ + + PQ+ F LV +S Sbjct: 180 FTVSLKELASEKFVLYPEDFDLYKIVTKAANKKGFEPQIAFQSRDFYTIQGLVGAGLGIS 239 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASL 289 LPE + + + + + + + + +I + +P Sbjct: 240 ILPEMILDGAIFKET-KSIALRDKELRRSVGIITTKKRNLSPSENLF 285 >UniRef50_P20668 HTH-type transcriptional regulator gltC n=17 Tax=Bacillales RepID=GLTC_BACSU Length = 300 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 63/299 (21%), Positives = 124/299 (41%), Gaps = 4/299 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+R F+EVA + + A+ L+++Q A+S+ I LEE L LF R + + LT Sbjct: 1 MELRQLRYFMEVAEREHVSEAADHLHVAQSAISRQIANLEEELNVTLFEREGRNIKLTPI 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F H ++ + A+E I + G + IG S++ L+P VIS F +++P V Sbjct: 61 GKEFLIHVKTAMKAIDYAKEQIDEYLDPHRGTVKIGFPTSLASQLLPTVISAFKEEYPHV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + + +G +I +R ++D + + + T + L ++ HP Sbjct: 121 EFLLRQGSYKFLIEAVRNRDIDLALLGPVPTNF-SDITGKILFTEKIYALVPLNHPLAKQ 179 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 +++ L + + + + + P V E A LV+ ++ Sbjct: 180 KTVHLIDLRNDQFVLFPEGFVLREMAIDTCKQAGFAPLVSTEGEDLDAIKGLVSAGMGVT 239 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQ 301 LPE + V +P+ K +I+ ++ P + L+ Sbjct: 240 LLPESTFAETTPRFT-VKIPIEFPQVKRTVGIIKPKNRELAPSANDFYEFVIQFFSKLE 297 >UniRef50_A3DB82 Transcriptional regulator, LysR family n=4 Tax=Gammaproteobacteria RepID=A3DB82_SHEB5 Length = 306 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 88/290 (30%), Positives = 147/290 (50%), Gaps = 1/290 (0%) Query: 6 KIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAG 65 K++Q+R + + G+I A++ML+ +Q L++SIQELE+ L L R LT AG Sbjct: 6 KLNQLRNLRAIIQHGNISAAAQMLHQTQSTLTRSIQELEKTLGVTLLDRGMNSTVLTKAG 65 Query: 66 ESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVK 125 F +LIL EL A +++RQ + G+I G + S++P VI +F ++H + Sbjct: 66 MMFEPRMNLILNELERAVDELRQIEKLSDGKIAFGCSHFPATSIVPDVIKKFQERHNSTR 125 Query: 126 VRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGAR 185 + I+EGQL +++ LR G+LDF I +EF E+L F++ R GHP + Sbjct: 126 ITIIEGQLSELLSSLRMGKLDFFIGVVSSDLMLNEFVEERLTSCSFSVVARKGHPLANST 185 Query: 186 SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQ-TPQVGVVCETFSACISLVAKSDFLSKL 244 S+ +L W +P YY L ++ + + ++ + LV D+L Sbjct: 186 SLAELQAAKWYIPAASHGYYSDLETVIFPNGVKSCGSVIFGDSSAIARKLVLNEDYLFVG 245 Query: 245 PEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 P M P H + ++P+ + LP+ Y LI R+ + TP +L+ + R Sbjct: 246 PRPMFLAPHHKDLISIIPIKDKLPEGHYSLISPRNKKLTPAALNLVNEIR 295 >UniRef50_Q1QYT3 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QYT3_CHRSD Length = 317 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 78/297 (26%), Positives = 138/297 (46%), Gaps = 3/297 (1%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M ++K+ ++ F+ + ++ A+ L MSQPA SK + ELE L LF R +G+T Sbjct: 10 MRVRLKLRHLQLFIALDDLRNLHRAAERLGMSQPAASKLLGELEGQLGLALFERHPRGIT 69 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 GE+ +HA IL L A +++ Q AG +++G + + +L+ + + R H+ Sbjct: 70 PNWYGETVIRHARGILSSLHQAGDELNALQAGSAGSVSVGTVMAPAVTLLTSAVERVHRD 129 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P +KV I +I L +GE DF I +F FE++ E+ CR GHP Sbjct: 130 RPNLKVSIDVDVSHELIPRLVEGEFDFAIARIPSTLPAGDFVFEEIGEEALCFVCRAGHP 189 Query: 181 AIGARS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAK 237 S ++ +++Y W + P +++ L P+ + +++V K Sbjct: 190 LADRTSLNLEAMVEYPWVLQPPGALMRQRVDHLFLHHGVALPRQIIDTPDILVALAMVDK 249 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 SD ++ ++ +LP E L Y L+ R+ R +P A+L++ R Sbjct: 250 SDTVTVTTRQVAELLCDQPRFRILPFPEALSVQPYGLVSLREQRLSPGAAALMSALR 306 >UniRef50_UPI0001745DD5 transcriptional regulator, LysR family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745DD5 Length = 290 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 74/291 (25%), Positives = 125/291 (42%), Gaps = 5/291 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++HQ+R V VAR G+ A++ ++SQP+LS+ IQ+LE+ L +LF R + LT A Sbjct: 1 MELHQLRYMVAVARTGNFSRAAQTCHVSQPSLSQQIQKLEDELGERLFDRLRRHAKLTQA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE F A ILEE+ AA + R G+I +G+ +I+ L+P +I+ F ++P V Sbjct: 61 GERFLPRAVRILEEMDAATREARAANDLDQGRITVGVLPTIAPYLLPKLIAAFSAKYPGV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V + E + E+D I + D F +L +++ + H + Sbjct: 121 QVVVHEDTTARLRELTAACEVDIAIASL--PLQDERFEVRELFDEELLLALPNNHRLVDQ 178 Query: 185 RSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + I + LL+ + + Q+ Q PQV SLV ++ Sbjct: 179 KKIIPEDLLEEKFILMKEGHCLGDQVLHFCHRQDFHPQVSCRSAQMETVQSLVQSGMGIT 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 +P M V +S+ PK R A+ + Sbjct: 239 LVPR-MALQEDRSVKPVYRSLSDPSPKRTIVAFWPRQRPLGKAAAAWLKLM 288 >UniRef50_B5YJV7 Transcriptional regulator n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJV7_THEYD Length = 302 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 67/295 (22%), Positives = 135/295 (45%), Gaps = 7/295 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ H+++ F VA S S +++++QPA+S IQ LEE +LF R S +TLT A Sbjct: 1 MEDHKLKVFCTVAETKSFSKTSEIIHLTQPAVSLQIQALEELYETKLFDRSSGSITLTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE Y++A IL A ++I + G + G + IG G ++ ++PAV F ++HP++ Sbjct: 61 GEILYKYAKQILTMYAEAAKEISKITGLIKGCVKIGAGTTVGNYILPAVAVDFKKRHPKI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V + G ++ L +DF I + P +F + ++ + + C HP Sbjct: 121 RVSVSIGNAKKILEMLNSSMIDFGI--ISEMPGKSKFIVDSIISDELCVICSADHPLNNQ 178 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQT---PQVGVVCETFSACISLVAKSD 239 +S+ ++ + + S + + L + + + ++ + + V + Sbjct: 179 KSVSLYDVVKEPFVIREEGSSTRVIIEKFLAEHGLSVSDLHISLILGSTGSIKEAVERGI 238 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 LS + + + L +L + E +Y+I +++ +P IT + Sbjct: 239 GLSIVSKWAIRKEVSCGNLRILKLKEGKITRDFYIILPKNTILSPAVEEFITYLK 293 >UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepID=A9W9P6_CHLAA Length = 301 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 71/287 (24%), Positives = 128/287 (44%), Gaps = 7/287 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R F VAR + A+ L+++QPALSK I +LE L LF R + + LT+A Sbjct: 1 MELRHLRYFEAVARHSHVTRAAAELHIAQPALSKQISQLERELGITLFDRVGRSLRLTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+ +A IL ++ A+ + +R G AG++ IG ++ L+P +++ FHQ++P + Sbjct: 61 GEALLPYARAILAQVEEARAAMAERIGLKAGRVTIGAPPTVGAHLLPPLLTIFHQRYPGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +R+ E + S+++ L G D + D + T LL + + HP Sbjct: 121 TLRLHEAGIQSLLDLLEAGITDLAVVAL--PVTDEQLTVTPLLNEPLVLIVSTTHPLARR 178 Query: 185 RSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + +L W + + + + TPQ + + VA +S Sbjct: 179 SEVMMTELRHERWILSPSSYELREATLKACREAGFTPQTVLEGGETETLVRFVAAGLGVS 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASL 289 +P +V L VS+ + L+ R D +P +L Sbjct: 239 LVPALAVAGCT---DVVRLTVSDQHLTRSLGLVWRSDRTASPAARAL 282 >UniRef50_C6J455 LysR family transcriptional regulator n=2 Tax=Bacillales RepID=C6J455_9BACL Length = 307 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 60/305 (19%), Positives = 129/305 (42%), Gaps = 9/305 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+ +++A + + A+ L+++QP+LS+ + +LE+ L +LF R + V LT A Sbjct: 1 MELRQLLYTLKIAEEKNFSRAADKLHIAQPSLSQQLSKLEQELGVKLFQRNTSTVELTYA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G SF HA I++ + ++++ AG++ +G L+P V+ F +P + Sbjct: 61 GASFIAHAQKIMDAVAQLRQEMDDISQLRAGRVVVGSMPITGSHLLPYVLPAFKASYPNI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V ++E +++ +G D + + ++E + E+ + P HP Sbjct: 121 QVTLLEDTSLNLEKLTAEGGTDL--SLLSLPLLEPTLSYEPIGEEIIDLAVPPDHPLTKT 178 Query: 185 RSI-------KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAK 237 + KQL + + + + K ++L + P V SLVA Sbjct: 179 PGVLEQGVEMKQLENEPFIVLKKGQGFRKMTADLCREAGFEPNVVFESNNIETVQSLVAA 238 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 ++ +P + LP++ P + R+ + + I F++ Sbjct: 239 GMGITLVPRFIARAKRSELIPAYLPLAAPAPSRTLVIAYRKGRYLSKAAEAFIETFKKTM 298 Query: 298 GYLQS 302 Q+ Sbjct: 299 EERQT 303 >UniRef50_P27111 HTH-type transcriptional regulator cynR n=108 Tax=cellular organisms RepID=CYNR_ECOLI Length = 299 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 72/295 (24%), Positives = 136/295 (46%), Gaps = 7/295 (2%) Query: 8 HQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGES 67 I F+ VA GS A+ L++SQPALS+ I++LEE L LF R + + LTDAGE Sbjct: 4 RHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDAGEV 63 Query: 68 FYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVR 127 + Q+AS L+EL A + I G + I + + + + +++ F+ ++P + ++ Sbjct: 64 WRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSITLQ 123 Query: 128 IMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI--GAR 185 + E + + L + ELD I + + E LL + A+ HP Sbjct: 124 LQEMSQEKIEDMLCRDELDVGIA--FAPVHSPELEAIPLLTESLALVVAQHHPLAVHEQV 181 Query: 186 SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSKLP 245 ++ +L D + + + +Q+ + PQV + + SA + L+ ++ + LP Sbjct: 182 ALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLLP 241 Query: 246 EEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 + GL + ++ L + L++R++S QT + + +C + Sbjct: 242 AAIAT---QHDGLKAISLAPPLLERTAVLLRRKNSWQTAAAKAFLHMALDKCAVV 293 >UniRef50_B2T7R4 Transcriptional regulator, LysR family n=5 Tax=Burkholderia RepID=B2T7R4_BURPP Length = 325 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 77/302 (25%), Positives = 143/302 (47%), Gaps = 5/302 (1%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++K Q+ + +G++R A+ +L M+QPA S+ ++ELE+ L LF R G+ T Sbjct: 13 RLKTRQLLLLAAMEEEGNVRRAADVLGMTQPAASRLLKELEDMLEVSLFDRTPHGMHATL 72 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 GE +HA ++L L A ++I + LAGQ+ IG+ A+ + +++P I+ +++PQ Sbjct: 73 YGEVMIRHARMVLSNLSHAHDEISALRSGLAGQVRIGVIAAAAATMVPRAIASVKERYPQ 132 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTY--YQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 +++ M+ L +GELD I Q + E +E L ++ + RPGH Sbjct: 133 LQIWAEVETSDVMLPRLAEGELDIMIGRVLERQNQFKTEVRYEPLADEPLCVVARPGHHL 192 Query: 182 IGAR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQ-TPQVGVVCETFSACISLVAKS 238 +++ +++ SW + P + + PQ V F A SL+ +S Sbjct: 193 ENETGLTLRGIVNASWVLHPPGSVLRHRFDLMFSQIGLNPPQNVVNTNNFLAISSLLLQS 252 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 D L+ LP+E+ L +P+ + +I R+ +P + ++ R G Sbjct: 253 DMLAVLPDEVARQYQQYGVLKRIPIDLPCRMDTFGIITRQSHLLSPAASVVLEALREAAG 312 Query: 299 YL 300 + Sbjct: 313 EV 314 >UniRef50_UPI00016945AE hypothetical protein Plarl_07755 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016945AE Length = 303 Score = 249 bits (638), Expect = 7e-65, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 126/293 (43%), Gaps = 5/293 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I ++ F+EV R S A+ +L+++QP +SK I+ +E+ L L R +K V LTDA Sbjct: 7 LDIRHLKYFIEVVRCKSFTKAADVLHITQPTISKMIKNIEDELGVVLLDRSTKQVMLTDA 66 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+S A I++ ++ G+I +G+ + P +I FH ++P + Sbjct: 67 GQSILLQAQQIVKSFENLSIELANTIHLKKGKIRMGLPPMVGSRFFPHIIGEFHHKYPNI 126 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +++++E + ++ +G LD + F + ++ + P H G Sbjct: 127 EIQLIEEGAKKVEEQVEEGHLDIGVVLLPIP--SGTFDSFPFVHEKLMVVVYPKHRLAGQ 184 Query: 185 R--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++K+L + + + ++ E P+V + +VA +S Sbjct: 185 TVIALKKLEHEPFILFREGFVLHDRIPEECIRAGFQPKVVYESSQWDFISEMVAAGLGIS 244 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 LPE + C L+ ++ +P+ E + +I ++ + I ++ Sbjct: 245 MLPESI-CRELNPNRVITIPLVEPSIDWSLAMIWPKEQYISYAVREWINFVKQ 296 >UniRef50_UPI00016C47B2 transcriptional regulator, LysR family protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C47B2 Length = 291 Score = 249 bits (637), Expect = 8e-65, Method: Composition-based stats. Identities = 71/296 (23%), Positives = 127/296 (42%), Gaps = 10/296 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELE---EGLAAQLFFRRSKGVTL 61 +++HQ+R FV VA GS A+ +++QP LS+ I LE G+ +LF R + V L Sbjct: 1 MELHQLRYFVAVAETGSFTRAAEREDVTQPTLSEQIMRLESKPHGVGRRLFDRLGRKVVL 60 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 TDAG HA IL ++ A+ +R G + +G +I+ L+P ++RF + H Sbjct: 61 TDAGRELLGHAQGILAAVKEAERAVRDSAEG--GSLRVGAIPTIAPFLLPGTVTRFRKDH 118 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P V++++ E ++ +L GELD + D EKL + + H Sbjct: 119 PNVQLQLKEDLTERLLADLLAGELDVALMAM--PVRDDRLHVEKLFAEPLVMALPAKHEL 176 Query: 182 IGARS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 + +L+ + + + Q+ L P+V E +++VA Sbjct: 177 ASKTEVKLADVLEEPFILLDDMHCFGDQVLSLCHRGGLEPRVVCRGEQIVTLLAMVAAGQ 236 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 +S +PE M + P+ + P + + + P +L+ +R Sbjct: 237 GVSIVPE-MAATADTSKQCAYRPLGKPTPVRTLCAVWHKQRFRPPSLRALVDMAKR 291 >UniRef50_A0AXF9 Transcriptional regulator, LysR family n=9 Tax=Burkholderia cepacia complex RepID=A0AXF9_BURCH Length = 329 Score = 249 bits (637), Expect = 9e-65, Method: Composition-based stats. Identities = 81/301 (26%), Positives = 145/301 (48%), Gaps = 3/301 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K+ Q+ AF+ VA +IRGA+R L ++QPA+S ++ELE L L R KG+ LTD Sbjct: 25 MKLKQLDAFLAVAEHRTIRGAARALGVTQPAVSGIVRELEHELGVPLVVRSVKGIALTDY 84 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +F A LI+EE++ +++I Q + G ++I + +++ +++P + F + P Sbjct: 85 GSAFAIRARLIVEEIQRTRDEIEQLRLGTTGSVSIAVSPTVALTILPRAFAAFTRDLPGA 144 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQG--PYDHEFTFEKLLEKQFAIFCRPGHPAI 182 + + + + + LR G LDF + P EF L FA+ R H Sbjct: 145 TLNVDDALTATDLARLRDGSLDFIVTHQLSNALPDPDEFASIPLFRTAFAVVARSRHRLA 204 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQ-TPQVGVVCETFSACISLVAKSDFL 241 ARS+++L+D W +P + + P+ V C +F+A + LV+++D L Sbjct: 205 RARSLRELVDAHWCVPRYGEGGDDLIRSIFMPFGLDVPKRVVHCPSFAATLGLVSQTDAL 264 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQ 301 + +G+V L ++E +P ++ RR + TP I + + Sbjct: 265 GVFARPLAEVERQSRGIVALNLAEPMPALTVAIVMRRHALLTPAALHFIECLKGASATVS 324 Query: 302 S 302 + Sbjct: 325 A 325 >UniRef50_C0ZI27 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI27_BREBN Length = 307 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 66/300 (22%), Positives = 127/300 (42%), Gaps = 10/300 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+ F+ + + AS L SQ LS+ I+ LE L LF R K +TLT+A Sbjct: 1 MELRQLEYFMAICEEMHFSRASEKLCTSQSNLSQQIKFLENELGVPLFDRLGKRITLTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ + + + + A+E I + G + IG+ + L A++ FH+ +P+ Sbjct: 61 GKVLLEQSRHVFSHIDYAREAIAAMKNNEGGTLTIGVLPGDADLLFDALLVEFHRLYPKT 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + ++E ++ ++ GE+D + + D T L ++FA+ HP Sbjct: 121 SLSVIE--STRIVEQITSGEIDLGVTVLPEP--DERITVIPLFHEEFALAVHRAHPLAKE 176 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++IK QL + M P + ++ + Q + T + +SLV K Sbjct: 177 KAIKFGQLQEVKMVMFPPDHQARQLINRYCIQEGFRLQPHIETTTLQSQLSLVKKGIGGC 236 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQS 302 LP + ++ + ++ + P L+ R+D + I + Y+QS Sbjct: 237 ILP-SLLLQNVNDDEIAIINLLHPTPSQDICLVYRKDKYMGFAARTFIDTLQ---AYIQS 292 >UniRef50_C2BX95 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2BX95_LISGR Length = 297 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 127/293 (43%), Gaps = 4/293 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q++ F+EVA + AS L+++Q A+S+ I +LEE L +LF R + + LT Sbjct: 1 MELRQLKYFMEVASFEHMTQASENLHVAQSAVSRQITKLEEELGIKLFDRVGRNMQLTTV 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE F + EL A+ + + G + IG+ S++ ++PAVIS F ++P V Sbjct: 61 GEDFLNQVKVAYNELLKAEAIVTEYSDPTKGSVRIGLPNSLASKVLPAVISAFRAEYPDV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +EG + L GE+D T D K +++ + HP Sbjct: 121 TYHFVEGSNAELKQLLLDGEIDITF-LSPVPVTDDSVEAVKFFDEKLKVIFPATHPLADR 179 Query: 185 --RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 S+++L + + P+ +K ++ + +A + + + F LV +S Sbjct: 180 YNVSLEELAAEKFILYPPNFDLFKIVTTAAEKKAISLDIAFQSQDFYTIQGLVGAGLGIS 239 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 LPE + + LP+ + + L+ + + +P ++ Sbjct: 240 ILPEMILDGTIFKDT-KALPLRNKELRRSVGLVVTKKRQLSPTEKLFYQFIKK 291 >UniRef50_B2TGB5 Transcriptional regulator, LysR family n=2 Tax=Burkholderia RepID=B2TGB5_BURPP Length = 331 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 75/299 (25%), Positives = 134/299 (44%), Gaps = 3/299 (1%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++K Q+ V++ S+ A+ +M+QP +K ++ELEE + LF R +GV T Sbjct: 23 RLKTRQLALIVQLDTHRSVLRAADAAHMTQPGATKLLRELEETMGVPLFERHPRGVEPTW 82 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 GE +HA +L ELR A +++ + L GQ IG + + +L+P ++ ++ PQ Sbjct: 83 YGEVLIRHARSVLAELRHAYDEVSALKAGLTGQAMIGTEVTAATNLVPQAVALLKKRFPQ 142 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 ++V I ++ L++G+LD + + L E Q A+F R GHP + Sbjct: 143 IRVNIEMEFSEVLVQRLQEGKLDMIVARIRNPDDLAALHYAPLAEAQHALFARAGHPLVK 202 Query: 184 ARSI--KQLLDYSWTMPTPHGSYYKQLSELL-DDQAQTPQVGVVCETFSACISLVAKSDF 240 +++ +L +W +P Q ++L + P V + SL+ SD Sbjct: 203 RKTLSWDELAPQTWILPPKGNVMRNQFTQLFLERHLALPTDVVESSSLPVITSLLQMSDM 262 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 ++ L E L LP L ++ RR R +P +++ R G+ Sbjct: 263 IAPLAREPVRPYCIAGALEPLPFELDLKLGPAGIVTRRGDRLSPGARAMLQALREAAGF 321 >UniRef50_C9KJ25 Transcriptional regulator GltC n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJ25_9FIRM Length = 307 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 66/287 (22%), Positives = 135/287 (47%), Gaps = 9/287 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q++ F +A+ A+ + +SQ ALS+SIQ+LE+ L LF R + LT+A Sbjct: 1 MELTQLKYFQAMAKCHHFTQAAEEMAVSQSALSRSIQKLEQELGVTLFERHGRTSELTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F H ++ EL A+++I + AG +++ S+ + +P ++ +FH+++P + Sbjct: 61 GQKFLFHVDRVIRELALAEQEI-ELDNGGAGVVHLSFLHSLGDTFLPLILRQFHERYPHI 119 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI-- 182 V++ + + +L GE D + + P + + L ++ + HP Sbjct: 120 DVKLNQQNSSMLSEQLTSGETDICLCSTMNEP---DTAWMYLWSEEMFLVVPEDHPLAQK 176 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 +++++ D + P + +Q+++ LD PQ+ + +S VA +S Sbjct: 177 SRVNLREIEDEPFVALKPEYTLRQQVNQFLDLAESHPQIVFEGDEVHTLVSFVAAHLGVS 236 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASL 289 LP + L G+V +P+S L K A + +P + Sbjct: 237 ILPHVPCTEHL---GVVFVPISFPLCKRAVGIAWNTSRPLSPAAMTF 280 >UniRef50_C6CYG5 Transcriptional regulator, LysR family n=2 Tax=Paenibacillus RepID=C6CYG5_PAESJ Length = 297 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 126/293 (43%), Gaps = 8/293 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q++ +++A + + A+ L+++QP+LS+ + +LE+ L LF R + V LT A Sbjct: 1 MELRQLQYVIQIAIEKNFSRAAEKLHIAQPSLSQQLSKLEQELGVLLFRRTTNSVELTQA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F + IL+ + ++++ G++ +G ++P V+ F + +PQ+ Sbjct: 61 GQVFVDKSQSILDAIEQLKQEMDDMAQMKRGRLVVGTLPITGSHILPLVLPVFGELYPQI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V ++E V + G D I+ D +E L+E++ + P H G Sbjct: 121 EVILVEDTTVKLEQLTANGGTD--ISLLTLPLVDQTLEWEPLMEEEICLAVPPSHRLAGR 178 Query: 185 R---SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 SI++L + + + + L L TP + SL+A + Sbjct: 179 TDEISIEELREEHFVGLKKGQGFRQILVHLCQQAGFTPNIVFESSNIETVQSLIAGGMGI 238 Query: 242 SKLPEEMGCDPLHGQGLVMLPVS-EILPKAAYYLIQRRDSRQTPLTASLITQF 293 + +P+ + G V + +S + P + R+ + + I Sbjct: 239 TFVPKMLTRA--AGGDFVPVYLSLKDRPSRTLIIASRKGRYLSKAAVAFIETM 289 >UniRef50_B9Y467 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y467_9FIRM Length = 309 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 71/300 (23%), Positives = 134/300 (44%), Gaps = 7/300 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + +R FVEV R GSI A+ L++SQPA+S +I++LE+ LF R SK + LT++ Sbjct: 1 MTLRHLRIFVEVCRTGSITKAAESLHLSQPAVSLAIRQLEDYYGILLFDRISKKLYLTES 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +AS I+E + ++ AG + IG S ++P ++ RF+ + PQ+ Sbjct: 61 GNKMLSYASHIIESFDDMETQLKNWDS--AGTLRIGSSISTGTQMLPQLVRRFNLRFPQI 118 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + +++ + +++ +LD + Y + + + P HP Sbjct: 119 RTQVLIDNSRIIEDKVLTNQLDLAL--VESLSYSPDIVCVPFYTDRLIVITAPKHPLTQN 176 Query: 185 R--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++K L DY + P + + LL + + I+ V ++ +S Sbjct: 177 PECTVKALADYPVLLREPGSGTREVVDALLVTAEVQITPLWESTSTRSIINAVKENIGIS 236 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQS 302 LP E+ + + + LP++ LP +I R+ TP + I + +E L + Sbjct: 237 ILPYELVKNEIQSGAVAGLPLASPLPNRTCSIIHHRNKYLTPSAQAFI-EVCQEYSNLST 295 >UniRef50_Q3AG03 Transcriptional regulator, LysR family n=2 Tax=Clostridia RepID=Q3AG03_CARHZ Length = 302 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 60/288 (20%), Positives = 121/288 (42%), Gaps = 8/288 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ Q+ F V++ S A+ L+++QP+++ +I LE+ L QLF R + V LTD Sbjct: 1 MEFRQLEYFYAVSKLNSFTRAAEQLHVAQPSITIAINNLEQELKVQLFDRSKRKVVLTDE 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F QH IL++++ AQ ++ + G I +G+ I L P + F +P + Sbjct: 61 GKLFLQHVEKILKDVKKAQSELEDLKNYKKGVIKLGIPPMIGAYLFPKIFKGFKNAYPHL 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + E +M++ L GELD + + + + Q + H Sbjct: 121 ELHVREEGSWAMVSLLENGELDLGLIILPE--QSENLCMLPITKDQIVLCVSENHRFSQE 178 Query: 185 R--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + S++QL D + + ++ L + +P + + LV+ ++ Sbjct: 179 KRISLRQLEDEQFILLKEDSYTRHKIIALCNYYGFSPNILLSSCQIETIKELVSNGLGIT 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLI 290 L M +V + + E + L ++D + + I Sbjct: 239 FL---MNGITKKWDKIVSIQLEEPM-NITIGLAWQKDRCLSRAAQAFI 282 >UniRef50_C3KMF5 Transcriptional regulator, LysR family n=42 Tax=Bacteria RepID=C3KMF5_RHISN Length = 308 Score = 246 bits (630), Expect = 5e-64, Method: Composition-based stats. Identities = 81/299 (27%), Positives = 137/299 (45%), Gaps = 3/299 (1%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++K ++ FVEVARQ S+ A+ +LN++QPA++K+I+ELEE L +F R +G+ +T Sbjct: 5 RIKFRHLQTFVEVARQKSVVKAADLLNVTQPAVTKTIRELEEVLGVSVFERDGRGIKITR 64 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 GE F +HA L LR + + Q + I IG ++S +MP ++ F ++ Sbjct: 65 YGEVFLRHAGAALTALRQGLDSVSQERSGDGPPIRIGALPTVSTRIMPRAMALFLEEKTG 124 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI- 182 +++I+ G+ ++ +LR G+LD + F+FE L +Q R GHP + Sbjct: 125 ARIKIVTGENAVLLEQLRVGDLDLVVGRLAAPDRMTGFSFEHLYSEQVVFAVRAGHPLLS 184 Query: 183 GARSI-KQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAKSDF 240 G +S+ L DY MPT + L + + S + V SD Sbjct: 185 GKQSVFAHLGDYPVLMPTRASIIRPFVERYLIANGIAGLPNQIETVSDSFGRAFVRSSDA 244 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 + + + + L LP+ K L R D+ + + L+ R G Sbjct: 245 IWIISNGVVATDIEDGLLAALPIDTSETKGPVGLTMRTDAIPSLPLSILMQTIREAAGA 303 >UniRef50_Q67SW7 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67SW7_SYMTH Length = 305 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 66/292 (22%), Positives = 127/292 (43%), Gaps = 4/292 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + + AF +A+ GS A+ L ++QP+++ IQ LE+ L QLF RR +GV LTDA Sbjct: 1 MDVQGLEAFWWIAKTGSFNRAAERLFLTQPSVTARIQALEKELGQQLFERRPRGVRLTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + HA +L++++ A++ + Q G +++G + S L+P ++ RF + +P V Sbjct: 61 GRALLPHAERVLQDIKRARQAVLDLQTASGGTLSVGSALTTSAYLLPDILLRFKRGYPNV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG- 183 +V + G+ + + + + P E L E+ + P HP Sbjct: 121 EVLVHTGRSHQVQQLVLDDTVQVGLVHA-PLPSHAEIVSYPLSEEPILLVVPPDHPVARH 179 Query: 184 -ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++ +L S+ Y+ + + Q P + + ++ A +V L+ Sbjct: 180 SEVTLDELTQESFITTDRASGYWALVEQWWASQGFVPHITMELDSIEAAKRMVLCGLGLT 239 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILP-KAAYYLIQRRDSRQTPLTASLITQF 293 LP + +V +P++ K LI RR + + + Sbjct: 240 MLPYSTVKSEIELSQVVAVPLANSATLKRQNILIHRRGKIWSGTAKAFLRVL 291 >UniRef50_Q126X0 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=Q126X0_POLSJ Length = 321 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 70/296 (23%), Positives = 132/296 (44%), Gaps = 3/296 (1%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 ++K QI + ++R A+ ++ +QPA + +Q+LEEGL LF R S+G+ Sbjct: 17 RLRIKSRQIMLLNALDEHRNLRRAAAAIHTTQPAATALLQQLEEGLGVALFERHSRGMEP 76 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T GE ++A +L + A +++ AG + IG + L+ ++RF H Sbjct: 77 TVYGEVMIRYARGVLHDFEYAGDEMAALAAGAAGLVRIGSVMGATPVLLTQGLARFKAGH 136 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P+V+V + ++ L +G+LD + YD + E+L + ++ RPGHP Sbjct: 137 PRVRVSLQVDTSDLLMPALLRGDLDVVLGRLPDQFYDEDLEIEQLEGEPMSVVARPGHPL 196 Query: 182 --IGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQ-TPQVGVVCETFSACISLVAKS 238 + ++ L+ +W + +++ + L P V + A SL+ S Sbjct: 197 LDLAKVTLADLVAQTWILHPLGSPMRRRVEQALQHAGLAAPPDIVETSSILATTSLLEAS 256 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 D +S +P ++ + + +LPV + A +I RR +P + R Sbjct: 257 DMISVVPLDVAQHYANYGLVAILPVELPMSMAKLGIITRRKKDLSPAVKGFLHALR 312 >UniRef50_C0ZCK2 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZCK2_BREBN Length = 295 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 60/298 (20%), Positives = 125/298 (41%), Gaps = 5/298 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ QIR + VA + S A+ L+++QP+LS+ I +LE+ L LF R + V LTDA Sbjct: 1 MELRQIRYVLAVAEERSFSRAANRLHLAQPSLSQQIAKLEKILGVSLFHRLPQHVELTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F Q A +++ + ++R +G++ +G ++P V+ F +Q P V Sbjct: 61 GQRFIQVAQTLVDMSEGLEREMRAYAVGESGKLLVGSLPITGAYVLPRVLPTFTKQFPGV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++++ME + L +G++D ++ D + ++ + HP Sbjct: 121 ELQLMEETSSHLEQLLVRGKID--VSLLTMPISDPSLEIIPAINEEIFLAVPANHPLAKR 178 Query: 185 R--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + + ++ D + + + L + P++ SLVA LS Sbjct: 179 KEVDLAEVADQPFILLKEGQGFRTISLRLCEQAGFRPRIVFESSNIQTAQSLVAAGMGLS 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 P+ + P + + + P + R+D + + + + G + Sbjct: 239 FAPKMITLAPGTIEPPTYVRIKTK-PSRTLVVAYRKDKPLSRPAEAFVQCLIEQGGKI 295 >UniRef50_A6SW66 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SW66_JANMA Length = 289 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 65/293 (22%), Positives = 134/293 (45%), Gaps = 8/293 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R F+ A+ S AS L+++QP LS I+++E+ L QLF R + V LT A Sbjct: 1 MELRHLRYFLAAAQSQSFTRASESLHITQPTLSHQIKQIEDELGIQLFDRVGRVVKLTTA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE F +A L E+ A + + + + G++ G+ +S +P +++ F++ +P + Sbjct: 61 GELFQVYAKRALLEVDAGLDALNELENLKHGRVTFGVLSSFGTFHLPPILADFNKVYPGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 K+ ++ + + L G+L F + Y + E L A+ HP +G+ Sbjct: 121 KITVLRLRSGEIEERLLDGDLHFGVA--YAPSSTEQINVEPLFTVPLALVVGDHHPLVGS 178 Query: 185 R--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++ +L ++ M + + K + +L TP++ + ++ V S + Sbjct: 179 AGITLNELNEHELVMLSDEYNSRKMMDAILLANGITPRIVMEMNAIEPILATVRHSSLAT 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 L + + GL +P++ + L RR+S + +L+ R+ Sbjct: 239 ILSANLVDE---MPGLHQVPLTPTVTH-TVGLFTRRNSHLSAAARALVDTIRQ 287 >UniRef50_Q141G8 Transcriptional regulator, LysR family n=6 Tax=Burkholderia RepID=Q141G8_BURXL Length = 316 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 81/290 (27%), Positives = 139/290 (47%), Gaps = 1/290 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K+HQ+ +A GSIR A+R L++S A++K+++ELE L A L R + GV T+ Sbjct: 1 MKLHQLSTLAAIADTGSIRAAARSLDLSPAAVTKAMRELEADLQAPLLVRSASGVAFTEF 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + HA ++L +L+ A +I +G AG++ +G+ ++ + +P + RF Q+ P+V Sbjct: 61 GRALVVHARVVLGQLQRAHAEIEALRGAAAGKLTVGVTPWVALTFLPPTVLRFRQRMPEV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ EG L + LR G LDF+I EF L A+ R HP G Sbjct: 121 QLEFFEGLLAVVQPRLRDGSLDFSIGRPPPASPQSEFHNVPLFSTHSAVVARRDHPKAGC 180 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLVAKSDFLSK 243 R++ +L D W + S + + Q P + + + + L+A +D LS Sbjct: 181 RTLLELEDAEWVLNWDPASRESISDNVFRKRGMQVPHTIHLAHSLAVVLGLLAHTDMLSI 240 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 P + L + L LP+ E + + + RR + +P A + Sbjct: 241 FPWPLVEVTLAKEQLWALPLRETVDETIVSITSRRGAPTSPAAACFLECL 290 >UniRef50_Q4ZQQ6 Regulatory protein, LysR:LysR, substrate-binding n=10 Tax=Pseudomonas RepID=Q4ZQQ6_PSEU2 Length = 304 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 71/288 (24%), Positives = 124/288 (43%), Gaps = 6/288 (2%) Query: 7 IHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGE 66 + IR + VA G+ A+ L++SQPALS+ I++LE L QLF R + V TDAG Sbjct: 15 LRHIRYLLAVADHGNFTRAAEALHVSQPALSQQIRQLESSLGVQLFDRTRRSVVPTDAGR 74 Query: 67 SFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKV 126 + HA L EL A + + GQ+ +G+ + S L+ +I RF +P V + Sbjct: 75 VYLDHARRCLLELDAGKRALNDVSDLSRGQLRLGVTPTFSEYLIAPLIDRFSALYPGVAI 134 Query: 127 RIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCR-PGHPAIGAR 185 + E L + L LD I + G + E + L ++Q + P A Sbjct: 135 ILTELPLEQITEALISDALDLAIG--FAGSHAVEIDSQPLFDEQLCLVMAKPASEKQAAL 192 Query: 186 SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSKLP 245 +++ L + + P + + L Q P +G+ + + + +VA+ + LP Sbjct: 193 TLEDLQALRFALLAPGFATRQLLDAWCQMQNFKPIIGLEANSIAILLKVVAQGRMATILP 252 Query: 246 EEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 + + GL + LP L++R++ Q+ + Sbjct: 253 DAIVR---KQPGLCEVQTIPALPGRTVALLRRKNGYQSAAAKAFAKLV 297 >UniRef50_C4ZIH4 Transcriptional regulator, LysR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZIH4_THASP Length = 318 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 84/291 (28%), Positives = 137/291 (47%), Gaps = 3/291 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +KI+Q+R F+ VA +GS+R A+ L +S A+S++++ELE + LF R S G L+ A Sbjct: 1 MKINQLRYFLAVADKGSVRAAATALGVSAAAVSQALRELETAMGTPLFTRESHGAVLSYA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G F HA LIL ++ A+ +I Q +G G + IG+ +++S++P ++RFH P V Sbjct: 61 GRQFLIHARLILGQVSRAEAEIAQIRGATGGSLTIGVTPWVAQSILPHALARFHALRPDV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + + E ++ LR G LD I F +L A+ R GHP A Sbjct: 121 HLDVTEAV-GTVHPLLRDGTLDLVIAIPPPRQEASIFYTRELFRCDLAVVGRLGHPFASA 179 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQA--QTPQVGVVCETFSACISLVAKSDFLS 242 S+++L+D W + + L LL P + IS++ + L+ Sbjct: 180 TSLEELVDQDWVLTMLGAGQDEPLVNLLAPHGIAPPPHRVHYARSALVAISMLEVGNMLT 239 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 P + PL + LP+ LP+ +I RR+ + I F Sbjct: 240 ICPWPLLETPLLRGRVQALPIRNPLPEMHTAIIVRRNDTLSAAGQLFIDCF 290 >UniRef50_B8IWD6 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IWD6_METNO Length = 304 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 77/297 (25%), Positives = 135/297 (45%), Gaps = 3/297 (1%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M ++K Q+ + ++ S+R A+ LNM+QP +K +Q LE + LF R +G+ Sbjct: 1 MLRRLKSRQLLLLIALSEARSLRKAAAALNMTQPTATKLLQNLENNVGLALFERGRRGMQ 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 T GE +HA L+L +L + +++ G+I IG S L+ ++R QQ Sbjct: 61 PTIYGEVIIRHARLVLADLNRTRLELQSLSSGGTGRIRIGAVISAIPVLLARAVARLKQQ 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 H + V I G +++ L +GELD + EF +E+L E+ I R GH Sbjct: 121 HSGLSVTIDVGTSDALVPALAKGELDVLLARPLVLADRPEFNYEELTEEPIQIVARAGHA 180 Query: 181 AIGARSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQ-TPQVGVVCETFSACISLVAK 237 + ++ L +WT+ P K L + P+ V + I+L+ + Sbjct: 181 LAASERLRLGDLAGSAWTLLPPGTPMRKVLEPIFAQIGPGEPRNVVETSSIMTMIALLQE 240 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 S+ L+ +P ++ L LP+S +Y ++ RRD +P T + + + Sbjct: 241 SEMLAVMPADVTNFNTRHGLLCRLPISLPPIMGSYGIVTRRDRPLSPSTTTFLQHLK 297 >UniRef50_B8K739 Transcriptional regulator, substrate-binding of LysR family protein n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8K739_VIBPA Length = 297 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 126/293 (43%), Gaps = 10/293 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + ++ F ++A+ G+ A+ L ++Q ALS SI++LE+ L +L R + ++LT Sbjct: 1 MDLKRLHYFNQLAKTGNFTKAADQLGIAQSALSTSIKKLEQQLGLKLVNRTERQMSLTAE 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ +HA +ILE++ A++++++ +G +G I G A ++ +P + +F + +P + Sbjct: 61 GQVLLRHAKIILEDVEQAEKELQELKGLTSGVIKFGAPAMLASYFLPDALEQFKKAYPGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI-- 182 ++ I E ++ L GELD + + + L + Q A HP Sbjct: 121 QINIHEAGTATLAQMLVNGELDLALIRGDRE--HEQIRQSLLAQDQIAACVPISHPFAKR 178 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL- 241 A ++ + + + ++ TPQV S+V + + Sbjct: 179 SAITLDEFCQQPLVLFKNGYFLRETVNSYCQQNKLTPQVHFETNLPELLKSMVRRQVGIG 238 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 + LP + DP L +P +P + + + + + + Sbjct: 239 TCLPILVADDP----ELKAIPFDPPIP-LQLGIGWKSSHYLSTAAKAFVDFLQ 286 >UniRef50_UPI0001826865 hypothetical protein EcanA3_10858 n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001826865 Length = 302 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 95/298 (31%), Positives = 150/298 (50%), Gaps = 2/298 (0%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M + K+ + AF +VAR GSIR A+R L +SQP LS++++ELE+ L QL R +G+T Sbjct: 1 MNYLPKLGHLLAFRQVARSGSIRSAARELGVSQPGLSRTLRELEQTLGTQLLLRSKEGIT 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT+AG +F + A +LEELR A +++ Q G++ +G + I+ ++ P V F + Sbjct: 61 LTEAGMAFSRRAEWVLEELRRAADEVEQINHFTHGRLTVGFSSLIALTVFPGVADAFKET 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 PQV + EGQL S++ +R GE+D I + E L F I R GHP Sbjct: 121 LPQVLLTAKEGQLSSLLPGVRSGEIDIAIGSVDPMAPPEGVMIEPLFTSPFCIVARKGHP 180 Query: 181 AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQV-GVVCETFSACISLVAKSD 239 AR + L W +P YY+QL L + V + ++ +++V +D Sbjct: 181 LAEARELMALRQAKWLLPESTMGYYQQLQNELSHFYRQVDVTPLRTDSVITGLNMVINAD 240 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 +L+ + M LV LP+++ LP A Y + + S T + + R C Sbjct: 241 YLTVVARAMCQPLQLEDKLVALPITQ-LPSAQYCAVWSQKSAMTTNARQFLIRLREAC 297 >UniRef50_B5JQV8 LysR substrate binding domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQV8_9BACT Length = 300 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 6/296 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++HQ+R F+ VA G+ A+ +SQP+LS I +LE L +LF R + LT A Sbjct: 1 MELHQLRYFLAVAEAGNFTRAAEKCFVSQPSLSAQIIKLEGELGQKLFNRLGRRAELTRA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G A IL E+ A+ I++ + + G + +G+ S++ L+P VI +++P + Sbjct: 61 GTFLESRARTILMEVENAERQIKENEEDIRGIVKVGVTPSVTPYLIPPVIRMCRERYPNL 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI-- 182 ++ I E +I+E++QG L+ I++Y E +L++ + H Sbjct: 121 EINIQENLRRRLIDEVQQGHLEVAISSYTGDAA--NIDAEPILQEDLVLAVSKTHRLATQ 178 Query: 183 -GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 SI+ D + + ++ + D P+V +C + +V + Sbjct: 179 KSKVSIEDFKDEPLVLLGESATLGDKVFDFFDKMNIEPKVVALCSQVRSVKEMVNLGLGV 238 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 + LP M + +V + K + + +P + R Sbjct: 239 AILPA-MAKEEHLPFEIVYRSLVSERMKRLLFALTHSRRYLSPGARVFVDLIREVA 293 >UniRef50_C7I3E5 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I3E5_THIIN Length = 301 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 79/302 (26%), Positives = 135/302 (44%), Gaps = 11/302 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+R FV +A QGS A+ L++SQP LS I+ LE+ + A+L R ++GVTLT A Sbjct: 1 MELRQLRYFVTIAEQGSFSRAAERLHISQPPLSTQIKALEDEIGARLLERSNRGVTLTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +F++ +L +L A E +RQ + AG ++IG + ++P + F ++PQV Sbjct: 61 GAAFFEDIRSVLAQLEHAVERVRQAERGDAGTLSIGFVSIADFGILPPTLKSFRARYPQV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI-- 182 V++ E + I ELR ELD +I + TF LL++ + HP + Sbjct: 121 DVQLHELTTDAQIRELRAAELDLSIG--LAPVDEPGLTFTPLLQEPLMLAAPTTHPVLQE 178 Query: 183 --GARSIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 GA ++ L + +P Y L P++ I LV+ Sbjct: 179 GSGAVDLRALAKEPFIVPPRNIGPGLYDLTLSLCQAAGFAPRITQHARQMQTVIGLVSCG 238 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 ++ +P + L G+ P+ ++Q + PL + R Sbjct: 239 MGVALVPASL--RQLKRPGVQYRPLLGQPATIELGILQLSQTS-NPLRDNFNQALREAAL 295 Query: 299 YL 300 +L Sbjct: 296 HL 297 >UniRef50_P37499 Uncharacterized HTH-type transcriptional regulator yybE n=4 Tax=Bacillales RepID=YYBE_BACSU Length = 292 Score = 243 bits (620), Expect = 7e-63, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 123/287 (42%), Gaps = 7/287 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ Q+ F +AR + A++ L+++QPALS+SI LE L LF R+ + ++L Sbjct: 1 MEWEQLEYFQTLARMQHVTKAAKSLSITQPALSRSIARLENHLGVPLFDRQGRSISLNQY 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G F + +++E +E+I+ G +++G ++ +L+P +I F Q++P + Sbjct: 61 GHIFLRRVQAMMKEYTEGKEEIQALLKPDQGVVSLGFLHTLGTTLVPDLIGSFQQEYPNI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + ++ L+ G+LD + + + KL ++ +F HP Sbjct: 121 SFQLKQNHSYWLLERLKSGDLDLCLLASIKPENP--IQWIKLWSEELFVFVPNDHPLASR 178 Query: 185 RS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 S + ++ + + + + EL + P + E + VA +S Sbjct: 179 ESITLNEIAGERFILLKKGYALRMTVDELFEKANIQPNIMFEGEEATTAAGFVAAGLGIS 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASL 289 LP+ G D + + VS + + + +P+ + Sbjct: 239 ILPDLKGLDQSK---ITKIRVSWPECQRVIGIAWIKGRFLSPVAETF 282 >UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=Q122V6_POLSJ Length = 307 Score = 243 bits (620), Expect = 8e-63, Method: Composition-based stats. Identities = 72/297 (24%), Positives = 120/297 (40%), Gaps = 6/297 (2%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 + Q++ FV VA +GS R A+ +N+S PALS+ I +LE L A+LF R ++ V L Sbjct: 3 RINFDLQQLQGFVAVAERGSFRAAAEHINLSSPALSRRIDKLETILGARLFNRTTREVEL 62 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T G F + A L++L +A I G++ + S + +P V+S F Q + Sbjct: 63 TPLGRVFLERARTALDDLESAMLGIADIATHRGGRVTVACVPSAALYFLPTVVSNFSQHY 122 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P ++VR+++ + ++ + GE DF I E FE + F + R HP Sbjct: 123 PGIRVRVVDETMNQVLQSVLSGESDFGIGFMNT--LVPEIAFESIHNDPFVLAMRREHPL 180 Query: 182 IGARSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 +S+ + S + L + L P + + +V Sbjct: 181 ARHKSVNWADVEKESLIAVARSSGNRQLLDDSLTKAGLNPSFAFEVSHVATLLGMVEAGL 240 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 L+ +P LV LP+ + L+ R + P RR Sbjct: 241 GLAAVPRMALASTHAT--LVGLPLRQPQTVRRVGLLTRHGVKLRPAAEMFHQHLRRA 295 >UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AG49_CARHZ Length = 297 Score = 243 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 69/299 (23%), Positives = 123/299 (41%), Gaps = 7/299 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + +Q+ F VA + S A+R+L++SQPA+S IQ LEE +L R +K VTLT A Sbjct: 1 MNRNQLEIFRVVAEKKSFSEAARLLHISQPAISMHIQALEEYYGTKLLDRTTKRVTLTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE Y++ +L + AQ DI Q G + G++ +G +I ++P ++S F++++P V Sbjct: 61 GEILYKYTLHLLSLMDKAQRDISQAAGIIKGKLILGASLTIGGHVLPPLLSSFYRKYPDV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI-- 182 + + ++ + LD E E L + + HP Sbjct: 121 NITMEIMNTEKVLERVSDLTLDL--GFVEGEVTTGELHVEALARDELVVVVAANHPLAGR 178 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQ---TPQVGVVCETFSACISLVAKSD 239 G S ++L M P K + E L ++ + + A V Sbjct: 179 GRISWEELATLPLVMREPGSGTRKVIEERLQAAGFKLPELKIVMELGSTEAIKGAVEAGL 238 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 + L + ++ L + + +Y++ + +P T +LI R Sbjct: 239 GAAILSKWTVRREINWGIFKQLLIENLPIYREFYVVLNNNKFHSPATQALIQFCREHLS 297 >UniRef50_A6W282 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=A6W282_MARMS Length = 321 Score = 243 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 80/307 (26%), Positives = 140/307 (45%), Gaps = 7/307 (2%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 + ++K ++ F+EV RQGS+ A+ +L ++QPA+SK ++ELE+ L +L R KGV Sbjct: 2 LENRIKYRHLQCFLEVTRQGSVVRAADVLALTQPAVSKKLKELEDILGVRLLERSKKGVE 61 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT G F +HAS + LR E I Q Q + +I+IG+ +++ S++P + RF Sbjct: 62 LTPFGNVFLEHASTSVAALREGTERIVQAQQKGISRISIGVLPTVATSILPESVKRFRTG 121 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 V++ ++ GQ ++++LR GELD + +F+ L +Q A RP HP Sbjct: 122 GIDVRLHLVSGQNALLMSQLRVGELDLVVGRLGVPEAMSGLSFQHLYSEQVAFTVRPNHP 181 Query: 181 AIGARS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTP---QVGVVCETFSACISLV 235 + + I + +Y+ P + L Q + ++ V ++F + Sbjct: 182 LLTKENFQISDIANYTVLYPPKGSITAPYVDRFLLSQGVSTLNDRIDTVSDSFG--KEFI 239 Query: 236 AKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 +D + + + + L LP+ A L R DS + + R Sbjct: 240 RNNDAVWIISRGVVAREISDGELDELPIDTKETLGAVGLTTRADSVPSMALKLFMNAIRE 299 Query: 296 ECGYLQS 302 L S Sbjct: 300 TAQTLDS 306 >UniRef50_C6XUT8 LysR substrate-binding n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XUT8_PEDHD Length = 294 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 64/295 (21%), Positives = 137/295 (46%), Gaps = 7/295 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++I QI F++ A A+ ++Q LS+ I++LEE L LF R K V LT+A Sbjct: 1 MEIRQINYFIKAAEMLHFTEAAAACFVTQSTLSQQIKQLEEELGMLLFDRVGKHVRLTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + +HA I+ +++ +++ I + + G + IG+ + S L+P ++ F ++P + Sbjct: 61 GNVYLKHARQIVLDVKKSKQAILELNNLVTGDLKIGVTYAFSSMLLP-ALAPFSSKYPGI 119 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDH-EFTFEKLLEKQFAIFCRPGHPAIG 183 K+ + G + + L+Q ELD + + Q D+ E L + ++ HP G Sbjct: 120 KIVVEYGTAGELEHNLKQAELDVILAFHDQTDNDNVSLEMEHLFSSRISMVVSKKHPLAG 179 Query: 184 --ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 S+ +L +P+ S L+EL + +P + + + +S+V + ++ Sbjct: 180 LKKISLNELAKVELILPSKGFSSRDLLNELFRKRKLSPLIKIEMNDVHSLLSMVDEGNWA 239 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 + + E+ L + L+ +P+S +++ ++ + + + + Sbjct: 240 TIINEKAI---LTWENLIAIPISGKEYYKQAFILWQKGIYRKKSATLFVDELIKT 291 >UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Proteobacteria RepID=B9JIM7_AGRRK Length = 306 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 69/295 (23%), Positives = 119/295 (40%), Gaps = 5/295 (1%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M+ +I +RAF V S A+ L++SQPAL++ IQ+LE+ + A L R ++ V Sbjct: 1 MSINCEILDLRAFQAVVELESFHRAAEALHISQPALTRRIQKLEQSIGAPLLDRTTRHVA 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 T G+ +LEE + I+ Q G I + + + +P VI F + Sbjct: 61 PTATGQEMIPLVRRMLEEFDGSLFAIKDSGSQRRGLITMACVPTAAFYFLPTVIRTFGRD 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 +P +++RI + + + +GE++F IN G D + +FE L++ F + R HP Sbjct: 121 YPHIRLRIRDLTANEGLQAVARGEVEFGINLM--GNSDPDLSFEPLIDDPFVLAMRKDHP 178 Query: 181 AIGARSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 I QL + + L L + + LV Sbjct: 179 LAAFDEIHWNQLEGHPLVVVDRSSGNRTLLDAALARANLRLNWFYEVTHLNTSLGLVEAG 238 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 +S LP + LV P+ + +++RR + +P I Sbjct: 239 LGISVLPR-LATPQEEHPFLVTRPIVNPVVTRTIGIVRRRSATLSPAADRFIDML 292 >UniRef50_D0ZGE3 DNA-binding transcriptional activator n=2 Tax=Edwardsiella RepID=D0ZGE3_EDWTE Length = 308 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 97/299 (32%), Positives = 149/299 (49%), Gaps = 2/299 (0%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M + KI ++ F EV R GSIR A+R ++ SQPAL+++++ELE + A L R ++GVT Sbjct: 1 MRYLPKIQHLKVFNEVIRSGSIRAAARKMDQSQPALTRTLKELEHHMGATLLIRSNEGVT 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LTDAG+SF A LILEEL A E++ Q G + G+ + +++ V++ F Q Sbjct: 61 LTDAGKSFAIRAHLILEELEKAAEEVEQITKNGHGHVAFGISSLFGITVLNKVLNDFKQG 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P + + E QL +++ LR G LDF + T + +F L + F I R HP Sbjct: 121 FPATVINVKEAQLSTLLPSLRDGRLDFALGTLTEEMPLGDFISIPLFDAPFCIVARKEHP 180 Query: 181 AIGARSIKQLLDYSWTMPTPHGSYYKQLSELL-DDQAQTPQVGVVCETFSACISLVAKSD 239 ++ L W MP YY + ++ D P ++ ++ ++LV D Sbjct: 181 LANCSELEALRQAKWVMPETDMGYYHNIRRIIPFDHPDNPHYPILTDSTVCIMNLVMNGD 240 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVS-EILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 +L+ L + G L LP+ + LP Y LI R T + +LI QFR C Sbjct: 241 YLTILSRARLREARFGGVLTALPIGLQFLPVGHYGLIYPRKRPLTQASQALIEQFRWHC 299 >UniRef50_Q1IHL3 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IHL3_ACIBL Length = 306 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 71/303 (23%), Positives = 132/303 (43%), Gaps = 9/303 (2%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M ++++ +R FV VA + A+ L+++QP LS+ I++LEE L LF R S+ V Sbjct: 1 MDNEIELRHLRYFVAVAEELHFGRAAARLHLAQPPLSQQIKKLEEILGYALFTRTSRAVK 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT AGE F + A L +R E++R G + +G S +++PA+ R+ + Sbjct: 61 LTSAGEVFLERAQRTLRHVREDMEEVRSIGRGEVGYLRVGFIGSSMLTVLPAIFGRYRRA 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 +P+V +++ E ++ L + LD I G H T E+L + F HP Sbjct: 121 YPKVNLQLQESYTSGVVEGLLKATLDAGI--LRDGGPTHGLTVERLYSEPFVAVLPGKHP 178 Query: 181 AIGARSI--KQLLDYSWTMPTPHGS--YYKQLSELLDDQAQTPQVGVVCETFSACISLVA 236 R++ + L D + P+ S Y++ + + P+V + + LV Sbjct: 179 LAKQRALSPRALKDEPFVFYPPYSSKLAYEKPVSICEAHGFRPKVVQEAPQWLTILRLVG 238 Query: 237 KSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 +S P + + + +V +P+ ++ L R + + + R Sbjct: 239 AGLGVSIAPACV--ERIAAPDVVCIPLRGAAVRSDIELAFREGEGR-EIVRAFAEIVRDG 295 Query: 297 CGY 299 + Sbjct: 296 FAH 298 >UniRef50_Q3JHY3 LysR-family transcriptional regulator n=44 Tax=Burkholderia RepID=Q3JHY3_BURP1 Length = 338 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 96/297 (32%), Positives = 152/297 (51%), Gaps = 1/297 (0%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 F +K HQ++AFV VA +GSIR A+R LN+S AL+K+++ELE L L R ++GV L Sbjct: 36 RFPMKYHQLKAFVAVADEGSIRAAARRLNVSPAALTKAVKELELALGVSLVVRTARGVQL 95 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T G+ ASLI+ E++ A++DI Q QG G + + + + +++P F ++ Sbjct: 96 TRFGQQLQVRASLIVAEMQRARDDIEQAQGATTGAVAAAITPAAAVTILPDAFRAFRRRF 155 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P +V I+EG + +L G LDF ++ EF +L + I R HP Sbjct: 156 PLARVSIVEGFPGVALPKLHDGSLDFAVSVVVPELLAAEFEHAQLYASRHVIVARNAHPL 215 Query: 182 IGARSIKQLLDYSWTM-PTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 A S+ L+D W M P+P S + + P V C +++ SL+ SD Sbjct: 216 AAATSLADLVDADWLMNPSPESSTQLMFNCFAEHGLPAPTRVVECPSYAIAHSLIQGSDL 275 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 ++ +PE++ + +LP+ E LP A+ ++ RRDS TP A L+ R Sbjct: 276 IASMPEQLLGVEWSRDRIAVLPIREALPAASVQVVTRRDSPLTPAAAMLVDCMRDAA 332 >UniRef50_A3V8N8 LysR-family transcriptional regulator n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V8N8_9RHOB Length = 311 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 72/301 (23%), Positives = 131/301 (43%), Gaps = 1/301 (0%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 + +K+ I+ V +A GS+RGA++ L SQPA+++++++ E+ L +F R S+GV Sbjct: 9 LLITMKVQHIQILVAIAEHGSLRGAAKALGKSQPAMTQALRQAEDDLGVSIFARTSRGVE 68 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT+ GE A I E+ E++ Q +G+ AG +++ + + +MP ++ F + Sbjct: 69 LTEVGERVLVRARTITSEINRLDEEVTQLRGEQAGAVHVCVSPLAAVRIMPRALTLFRKT 128 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 HP++ VR+ G + LR+G D I E E L++ + P Sbjct: 129 HPKIDVRLTSGLFPGALKPLREGRTDIVIGPAPPAGMLREIAIEHLVDTPIQVITAANSP 188 Query: 181 AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVC-ETFSACISLVAKSD 239 + ARS+ L + W M + D P E++ ++LV Sbjct: 189 LLSARSLGDLAEAQWIMIGAPTGPGDIFRQPFLDHGFAPPHATTTSESYFGALALVESLG 248 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 + P+ + D + +P+ E + L+ R TP +L RR Sbjct: 249 AVCTFPQLLLDDVQKTWRIAPIPIQETITPLKISLMTRAGHPLTPAADALANCIRRRASS 308 Query: 300 L 300 + Sbjct: 309 I 309 >UniRef50_B9Z0I5 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z0I5_9NEIS Length = 298 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 79/298 (26%), Positives = 144/298 (48%), Gaps = 3/298 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K+ Q+ F+ V + S+R A+R L+++QPA+++++QELE L L R +G+ LT Sbjct: 1 MKLQQLEVFIAVTEEKSLRAAARRLDLTQPAVTRTVQELESDLGVVLMTRSVQGIELTSF 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + A +LE+ R A+E++ Q +G + G++ + ++I+ +L+P I RF + P+ Sbjct: 61 GAALRIRAQQLLEDARRAREEMDQLKGDMRGKVTVSATSTIALTLLPQAIDRFQEAAPEA 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ +E + LR G +DF ++ D + T L F + R HP A Sbjct: 121 ELTFLEVKFPQATQHLRDGSIDFLVSHVLPDMLDDDLTSIPLFTVDFVVMAREQHPLRNA 180 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQ--AQTPQVGVVCETFSACISLVAKSDFLS 242 R + +L + W+ G + E L Q P+ + C +F+ + LV+ +D L Sbjct: 181 RRLAELAEAQWSTTVTSGGTQHSVMEALFQQEGLPLPRRLIQCSSFAIALGLVSGTDTLV 240 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 + + GL +P+ + LP ++ R+D TP +T R L Sbjct: 241 LFSR-LLAQRIADLGLRQIPLEQPLPALEMSIVMRKDILLTPAAQHFVTCLRASAEVL 297 >UniRef50_A5V773 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=A5V773_SPHWW Length = 351 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 78/297 (26%), Positives = 134/297 (45%), Gaps = 3/297 (1%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++ + +R + + GS+ A+ L M+QPA++K++QE E L +LF R ++GV T Sbjct: 3 RLTMRHLRIVLAITDGGSLVAAAHTLCMTQPAITKALQETEALLQIELFSRTNRGVVPTP 62 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 AG + HA LI ++ A E+I + + G+I +G S S L+P I+ + P+ Sbjct: 63 AGLALAAHARLITAQIGHAAEEIHDLRDGMGGRIAVGTLLSASADLLPRAIAMLRRDRPK 122 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 + V I+EG ++ +LR G+LD + + E LL + RPGHP +G Sbjct: 123 LVVTIVEGTNDRLLPDLRLGKLDMVVGRLPEYHELQGLHQEVLLTDVSCVIVRPGHPLVG 182 Query: 184 AR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQV-GVVCETFSACISLVAKSDF 240 + L + W +P + + + + D+ P V + SLV +D+ Sbjct: 183 RDPLRLADLAGWDWILPRLETTLRRHIDQAFRDEGVEPPPHAVESVSQLTNRSLVMDADY 242 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 L LP ++ LV+LP+ + R + R + LI R Sbjct: 243 LGILPWQLAHREARAGHLVILPLLLRPTIGPVGISTRAECRLSSAAEMLIAAMRDFA 299 >UniRef50_C1F7X5 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7X5_ACIC5 Length = 305 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 75/291 (25%), Positives = 128/291 (43%), Gaps = 5/291 (1%) Query: 6 KIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAG 65 ++ IRAF+ VA+ + A++ L++SQ AL+ IQ+LEE L +LF R + V LTDAG Sbjct: 4 ELRHIRAFLAVAQHANFTRAAQELHVSQSALTVQIQQLEEALGVKLFDRNKRRVALTDAG 63 Query: 66 ESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVK 125 I+ + A R+ G G +++ + S++ ++ +SRF HP + Sbjct: 64 REVIAPLQRIVVDAEAIVSRTREITGLRRGVLSMAVLPSMASGILSTALSRFTAAHPGIM 123 Query: 126 VRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA- 184 + I + +I ++++ E+DF + T D E T L + F HP Sbjct: 124 IHIHDVVADQVIEKVKKEEVDFGVATVMHA--DKELTLMPLFTDRLFAFLPEQHPLSSRA 181 Query: 185 -RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSK 243 S++Q+ DY + S + + L D T S +SLV + Sbjct: 182 SVSLQQISDYPLVLMARGTSVRSMVDQALRDHGLTATAAYEANYMSTALSLVRAGFGIGI 241 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 LPE+ G Q LV LP+ +++ R+ +P ++ R Sbjct: 242 LPEDAGTMG-SAQNLVALPIVRPQLTRPIHVLMRKGRSASPAVQQMLQILR 291 >UniRef50_C0Z518 Transcriptional regulator n=3 Tax=Paenibacillaceae RepID=C0Z518_BREBN Length = 295 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 121/294 (41%), Gaps = 6/294 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ + F EVAR GS A+ L +QP ++ +Q+LE+ A LF R + + LT A Sbjct: 1 MELVYLHTFREVARYGSFTRAAEELGYAQPTVTAQMQKLEQSYGAPLFERYGRKLRLTQA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+ +A ++ ++E I+ Q G I IG +++ +P + F QQ+PQV Sbjct: 61 GEALLPYARELIRLYGESKEVIKH---QTTGPIAIGTIDTLAAFFLPPYLQAFCQQYPQV 117 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA--I 182 + + ++ ++R G LDF I + + D E + E++ + P H Sbjct: 118 DLVLRTAGEAEIVQQIRDGYLDFGI-IFDRPCTDPELVTHVIREEELVVVMPPAHRFTTA 176 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 A ++ L + +Y L E + T ++ A V ++ Sbjct: 177 TALTVHDLGGEPLVLTEEGCTYRGMLLEAFGEAGMTQRIACQFSNPEAIKQCVRCGLGVA 236 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 LP L L +P P + L+ + +P +L+ R Sbjct: 237 LLPVMAVQRELAEGVLTAIPFQSDKPPFSIQLVYHKKKWLSPSMVTLVDTITRS 290 >UniRef50_B8KMT5 Transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KMT5_9GAMM Length = 300 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 71/295 (24%), Positives = 133/295 (45%), Gaps = 5/295 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 V I+Q+ AF VAR GS A+ L++SQPALS +I+ LEE L +LF R ++ VTLT Sbjct: 1 MAVPINQVMAFSAVARTGSFAEAALRLHLSQPALSIAIKNLEEALGGKLFARTTRSVTLT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 G++FY A +L + + +D+R G+++I + + +L+P +++ FH+Q+P Sbjct: 61 PEGKAFYPVARRLLSDWEQSLQDVRNHFSLRRGKLDIAAMPTYTINLLPKILASFHRQYP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 + V + + S++ +R+ + + + + TF+ L +F HP + Sbjct: 121 NINVTVHDVIAESVVEMVREHRCELGVT--FDPDDSPDLTFQPLFIDRFIAIFPKQHPLL 178 Query: 183 GARSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 G S+ + LLDY ++ + L + + +V + Sbjct: 179 GKGSLRWRDLLDYPHISLQKPAGTRARIDQTLAKKGLRITPAFESHQLVSIGRMVREGLG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 LS +P + GL ++ + +I RR + ++ + R Sbjct: 239 LSVVP-STSRAQMKEMGLECRAIAFPVITHQLGVITRRQQTLSVAAQAMASLIRE 292 >UniRef50_C9YBM2 Putative uncharacterized protein n=2 Tax=cellular organisms RepID=C9YBM2_9BURK Length = 309 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 82/303 (27%), Positives = 144/303 (47%), Gaps = 10/303 (3%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 ++ +++ Q+R FV VA + A+ L+MSQP LS+ I++LEEGL LF R + V Sbjct: 9 LSMRLETRQLRYFVAVAEELHFGKAAVRLHMSQPPLSQQIRQLEEGLGVTLFERTQRSVK 68 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT AG+ F A L +L A + +R AG + G A+ + +++P+V+ F Q+ Sbjct: 69 LTYAGQVFLAQARNALSKLEEAVDVVRAAARGEAGFLRCGYTAASAYAVIPSVMHAFKQR 128 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 +P V+V + E ++R+G LD + + D EKL+E+ + HP Sbjct: 129 YPLVEVALRESLSGDQYRDIREGRLDIGLVRPFGALPD--LATEKLIEENLIVAIPSEHP 186 Query: 181 AIGAR--SIKQLLDYSWTMPTPHGS--YYKQLSELLDDQAQTPQVGVVCETFSACISLVA 236 R I L + + +GS ++ + LL + P++ A I+LV+ Sbjct: 187 LAQQRIVDIHDLQSQPFVGFSSYGSQYFHDMVENLLGGEKVVPKLVQRATQPHAVIALVS 246 Query: 237 KSDFLSKLPEEMGCDPLHGQGLVMLPV-SEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 L+ +P+ +H +V P+ + LP+ +L RR++ +PL ++ R Sbjct: 247 AGLGLAIVPDASAR--VHMDRVVYRPLHASRLPRPELHLCWRREN-ISPLISNFKASARE 303 Query: 296 ECG 298 Sbjct: 304 VAA 306 >UniRef50_A4J1K6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J1K6_DESRM Length = 308 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 72/305 (23%), Positives = 133/305 (43%), Gaps = 7/305 (2%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + ++Q F VA + S GA++ L +SQPA+S I+ LE+ +LF R ++ VT+T Sbjct: 1 MLLSLYQFHIFKTVADKKSFSGAAQALYISQPAVSMHIKALEDHFRTKLFDRNTQQVTIT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 +AG Y++A IL + A+ DI + G + G ++IG ++ ++P ++ F+++HP Sbjct: 61 EAGRILYKYADKILNLIDQAENDISRFTGNIEGPLSIGASFTVGEYVIPKILGTFNKEHP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 QV+ + ++N + + E+D + E + L+ + I P +P Sbjct: 121 QVRALLQVTNTEQIVNLVLKQEIDLGL--IENQVNKTELVAKPFLQDELIIVIPPDYPLS 178 Query: 183 GAR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQ---TPQVGVVCETFSACISLVAK 237 + S++ L+ M K L ++ T + + + A V Sbjct: 179 EHQFISMEDLVALPLVMREQGSGTRKITEARLIEEGVDLNTLNIVMELGSTEAVKEAVEA 238 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 + + + L LV + +I +YLI RD QT + IT C Sbjct: 239 GFGTTIISKWAVQKELKLGTLVPVRFKDISLFRKFYLIYHRDKFQTTVVEEFITFLISFC 298 Query: 298 GYLQS 302 + S Sbjct: 299 SGITS 303 >UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=Rhodobacter sphaeroides KD131 RepID=B9KVK0_RHOSK Length = 321 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 73/303 (24%), Positives = 131/303 (43%), Gaps = 9/303 (2%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 + + +RAFV A S R A+ +++SQPAL++ IQ+LE L L R ++ V+L Sbjct: 13 RMNIDLEDLRAFVATAEMQSFRAAADSIHLSQPALTRRIQKLEATLGVSLLERTTRRVSL 72 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T G F A IL++L + +R+ + +G ++I + + +P VIS F ++ Sbjct: 73 TAVGRDFLPRARRILDDLETSLLSVREIAERRSGLVSIACIPTAAYYFLPDVISAFTEEF 132 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P ++ RI + ++ + E DF I G D + TF+ L+E+ F + CR HP Sbjct: 133 PAIRFRIFDAGANEVLQSILNREADFGITLL--GADDPDVTFDPLIEEPFLLACRRDHPL 190 Query: 182 IGARSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 S+ L + + + L P+ + S + LV Sbjct: 191 ARQESVTWADLAAHRFVTVGRTSGNRLIMDLALARANVRPRSFFEVQHLSTSLGLVEAGL 250 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASL----ITQFRR 295 ++ LP M +V LP+ E +++ +R+ P ++++R Sbjct: 251 GVAALPR-MALPAGPHPSIVTLPLIEPRVTRTVGVVRVPGARRAPAAEQFYQMLLSRWRD 309 Query: 296 ECG 298 G Sbjct: 310 NAG 312 >UniRef50_A6ULR6 Transcriptional regulator, LysR family n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6ULR6_SINMW Length = 307 Score = 239 bits (612), Expect = 7e-62, Method: Composition-based stats. Identities = 68/296 (22%), Positives = 123/296 (41%), Gaps = 3/296 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ ++ F +A G I A+ L +QPALSKS++ +E + +L + +GV LT A Sbjct: 1 MELRDLQYFEVIATTGHIGRAAEKLGRTQPALSKSVRRIESEIGTKLLVKSGRGVALTTA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + A + + ++ G + +G GA+ + L+P V SR ++ P + Sbjct: 61 GRVMLERARSLRMSVEQNLREMADIAKGAVGNVRVGSGATTAEYLLPLVCSRILREAPGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 K I G + L G++D + +G + +T +L E + GHP Sbjct: 121 KFEISIGMNDVLRTALNDGKVDIVVGPVTKGD-ESNYTVHRLGEDSVVVAAARGHPLTRK 179 Query: 185 R-SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAKSDFLS 242 + +I L DY W +P + + + + P V + S L+A +D L+ Sbjct: 180 KATIADLQDYGWVLPARSVVTRQWIDAAFASRDLSEPDVAIQTNNISLSPRLIAPTDLLT 239 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 + G+ LV + + E + R S P I ++E G Sbjct: 240 FISRRNLGRGRVGEPLVEISLPETTMHREVVAVHRNSSYMPPAVERFIAILKQEAG 295 >UniRef50_B1Z4Z1 Transcriptional regulator, LysR family n=5 Tax=Proteobacteria RepID=B1Z4Z1_BURA4 Length = 313 Score = 239 bits (611), Expect = 8e-62, Method: Composition-based stats. Identities = 73/291 (25%), Positives = 132/291 (45%), Gaps = 5/291 (1%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M + ++AF V GS R A+ +++SQPALS+ I +LEE L +LF R ++ VT Sbjct: 1 MGINFDLTDLQAFRAVVELGSFRKAADAISISQPALSRRIDKLEEALGVRLFERTTRSVT 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT G F A +L++L A IR G + I S++ +P VI+ +H++ Sbjct: 61 LTTVGRVFAPSAEQLLDDLDVALLGIRDVSSSRLGHVTIACVPSVAYYFLPNVIASYHRR 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P+++V++++ +++ + GE DF ++ G + E F+ LL+++F CR HP Sbjct: 121 FPRIRVKLLDAGANEVLSAVISGEADFGVSFM--GSQEPEIDFKLLLQERFVAACRRDHP 178 Query: 181 AIGARSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 + + +L +Y + L + L A + + L+ Sbjct: 179 LARKKRVTWNELYEYEYVSVDKTSGNRLLLDQALTTVAPRAPSVCETRHVTTLLGLIEAG 238 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASL 289 ++ +P M L +P+ E + K +++RR TP Sbjct: 239 LGVAAVP-SMAMPGHDHPLLTSVPLVEPVVKRRVGIVKRRGRPLTPAAEEF 288 >UniRef50_A9BN68 Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BN68_DELAS Length = 342 Score = 239 bits (611), Expect = 8e-62, Method: Composition-based stats. Identities = 83/300 (27%), Positives = 141/300 (47%), Gaps = 3/300 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K+HQ+R V VA GS+R ASR L ++Q A++++++ELEEG LF R+S G+ LT A Sbjct: 25 MKLHQMRYLVAVAGCGSVRAASRALGITQSAITQALRELEEGHRLALFERQSSGIVLTPA 84 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLA-GQINIGMGASISRSLMPAVISRFHQQHPQ 123 G + +HA LI ++ A++++ + + A ++++G+ + +SL+P V+ F + PQ Sbjct: 85 GRTLLRHAQLITGQMAQAEDEMARLRDTCAVARLSVGVTPWVGQSLLPHVLRAFRAELPQ 144 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V++ + EG LR+G LD I GP + L + R GHP G Sbjct: 145 VRLELFEGLSAVAHPRLREGTLDLLIGRVPSGPSGGDLHGTPLFRYDATVVARTGHPLAG 204 Query: 184 ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVV--CETFSACISLVAKSDFL 241 ARS+ +L+D W + + L VG + + S + L+ SD L Sbjct: 205 ARSLAELMDCDWLLNYTPPEEDDLVRRLFLRHGLPVPVGHIHLVHSASLLLHLIVHSDML 264 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQ 301 S P + + LV L + E ++QR + + + + Sbjct: 265 SLCPWPLIESGVPQGTLVPLSLREQFEPHTVGVVQRGHGPLPWVAERFVHHLMEQVHACR 324 >UniRef50_Q46MA3 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46MA3_RALEJ Length = 296 Score = 239 bits (611), Expect = 8e-62, Method: Composition-based stats. Identities = 66/295 (22%), Positives = 124/295 (42%), Gaps = 9/295 (3%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M + + +R F+ +A + + A+ L+++QP LS I++LEE + L R + V Sbjct: 1 MDIVMDLRHLRYFIAIAEELNFTRAAERLHIAQPPLSMQIRQLEEEMDVTLLNRTRRHVE 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT+AG F + A IL A ++ G++ +G S +L+P ++ + ++ Sbjct: 61 LTEAGRIFLEQARQILRATERAVVQAQRAHRGETGRLTVGFFEHTSYTLLPPILRAYRER 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P V++ + +V LR+G+ D I+ P E T+E +LE+ F + HP Sbjct: 121 FPSVEILLRWFPVVKQAEALRRGDAD--ISFMRPVPDLEEVTWETILEEPFVLAVPARHP 178 Query: 181 AIGAR--SIKQLLDYSWTMPTPHGS--YYKQLSELLDDQAQTPQVGVVCETFSACISLVA 236 A S+K+ + M P + ++ + P+V + LV+ Sbjct: 179 LANAESISLKKCAQEPFVMYIPEMAPDFHAMNMRMCASAGFVPKVISEVGQVYTLLGLVS 238 Query: 237 KSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLIT 291 + +P + + +V P+ P L + TPL + I Sbjct: 239 SGAGIGFVPASV--RKVKFDHVVYKPIEGRQPTIEIMLGYSQ-RTPTPLMTAFIE 290 >UniRef50_Q15NZ1 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=Q15NZ1_PSEA6 Length = 414 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 73/299 (24%), Positives = 123/299 (41%), Gaps = 3/299 (1%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 + V ++ AF+ + ++ A+ LN+++ A+ S+++LE L LF +GV Sbjct: 110 SMDVSYKRLAAFISLYHCKNVHSAADQLNVTKAAIYSSVRQLEVWLGIFLFESEPQGVVP 169 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T QH L E+R A ED+ G +G + IG L P I+ +H Sbjct: 170 TPYCNVLAQHLKLAFSEIRYALEDLANLDGVTSGSVKIGTLPYTRTYLTPQAINLLLDEH 229 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 + V EG + LR G++DF I D + E LLE + ++ R HP Sbjct: 230 HNLDVSTREGPYNLLEVSLRNGDIDFIIGAIRPSEKDSDLNTEILLEDKLSVIARSNHPL 289 Query: 182 IGAR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAKS 238 +G S+ L DY W +P H + EL+ P + + S L+ S Sbjct: 290 MGRENLSLGDLSDYGWVLPELHTPSGRLFLELMKAHGLPIPTHSIHTSSLSMVRGLLMGS 349 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 D ++ L + + + L +LPV + RR + +P + + R+ Sbjct: 350 DRVTLLSKHQIYYDRNHELLDVLPVDIGETYRPIGITMRRRTEPSPAAQLFLDKLRQVA 408 Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 44/84 (52%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + Q+R F+ V + S+ A+ LN SQ A++KSI +LE+ L LF R + G+ Sbjct: 12 LSLRQLRFFMSVYKLKSVTKAANELNRSQTAITKSITDLEKSLNVSLFDRVATGMIANAY 71 Query: 65 GESFYQHASLILEELRAAQEDIRQ 88 GE+F ++E + A + Sbjct: 72 GEAFATRTQRAIDEFQKASQSFAS 95 >UniRef50_C1A9Z7 LysR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9Z7_GEMAT Length = 296 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 74/293 (25%), Positives = 135/293 (46%), Gaps = 5/293 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I +RAF+EVA G+ A+R + ++QP+LS IQ LE+ L LF R +GV LTD Sbjct: 1 MDITLLRAFLEVADAGAFSRAARRIGIAQPSLSLQIQRLEQQLGTTLFERHGRGVALTDV 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ Y A I++++RAA+E +R+ + G I +G +I+ ++PA + R +HP Sbjct: 61 GKGLYPRARRIVDDVRAAEEAVRREVAEGFGSITVGAIPTIAPYVLPAALERLQHRHPGA 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA--I 182 +V + E +++ LR+G +D I + L + + HPA Sbjct: 121 RVVLREDYSAVLVDLLREGAIDVAIAALPYDFGT--LPQDVLGSEMLLVAVPALHPAARA 178 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 G ++ QL D P +Q++ D + P V + +V LS Sbjct: 179 GKITVAQLQDAPTVTLDPVHCLGEQVAGFCDARQVNPSVVCRSAQLTTVFEMVGAGMGLS 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 +P +M + ++P++++ + + RD + + + + R+ Sbjct: 239 IVP-QMAAAKHNTSRCAVVPLADMALERDIIALWPRDRAPSKVAMTFVDCVRQ 290 >UniRef50_C0Z4V5 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z4V5_BREBN Length = 298 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 69/293 (23%), Positives = 133/293 (45%), Gaps = 5/293 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I Q++ FVEV + + A++ L++SQP++SK I+ LEE L L R + + LTDA Sbjct: 1 MDIRQLQYFVEVVKHKNFTKAAQSLHVSQPSISKMIKALEEELEVVLLDRTERKMDLTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE Y +A+ +L+ + I + + G++ +GM ++ L+P VI+ F +Q+P + Sbjct: 61 GEMVYSYATKVLQLMEGMASSIAELRNVERGRVKLGMMPTVGSFLLPNVIALFKKQYPGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG- 183 + + E + ++ QG +D + +F LL + H G Sbjct: 121 DIEMKEYSAKLLEIQMEQGSIDVALTVL--PMDQEKFEAVPLLAEDLVAIVHREHWLAGV 178 Query: 184 -ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 S++QL D ++ + T + + + P V + + +VA +S Sbjct: 179 DEVSLEQLKDEAFILFTEEYAMHDVVRHACKLSGFEPNVAYMSSLWDFVGEMVATQLGIS 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 +P + L+ L + +S + Y LI R++ + T + I+ + Sbjct: 239 LIPRSIVRR-LNNGQLHTVNISYPVIDWQYALIYRKEGYLSHATKAFISFVEK 290 >UniRef50_C6D0W9 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D0W9_PAESJ Length = 296 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 121/291 (41%), Gaps = 7/291 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++I Q+ F + + A+ L ++QP +S I++LEE L LF R K + LT+A Sbjct: 1 MEIRQLEYFQAICDELHFTRAADKLGITQPTMSYQIKQLEEELGVPLFHRIGKKIALTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G H+ I + A+E+I + G + IG L+ ++ FH ++P + Sbjct: 61 GFILLNHSRNIFRSIDGAREEISELHHMERGSLTIGTLIGEINDLVSGLLVDFHNKYPGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++++ L +++ L Q ELDF + + D F+ L E++F P G Sbjct: 121 SIKLL--ALEDVVDPLLQDELDFAVTIF--PVDDDRFSKVSLYEEEFYFVAHSNSPLSGE 176 Query: 185 RS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 S I++ + M + + + + + + +SLV S Sbjct: 177 PSVTIEEAMKEPIIMFPKTHRCRQLIDTVCSMHGVAWEPVIETSAIKSILSLVQSGAGAS 236 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 L + + + Q ++M+P+S + + +D T + + Q Sbjct: 237 ILSKTLL-ELYPDQNMIMIPISNPSLRREVGIAYLKDRYIGKATIAFMKQL 286 >UniRef50_D1UCJ8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UCJ8_9BURK Length = 325 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 79/297 (26%), Positives = 144/297 (48%), Gaps = 1/297 (0%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 + +KIHQ+R + +A GS+RGA+RML+ S A++++IQ+LEE + QL R S GVT Sbjct: 6 LNHTMKIHQLRVLIAIADAGSVRGAARMLDSSPAAVTQNIQQLEETVRMQLVVRTSSGVT 65 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT G++ HA L+ ++ A + I +G+ +G+++I + A ++ + +P ++RF + Sbjct: 66 LTACGQTLLAHARLVAAQMTRAHQAIDAMRGEPSGRLSIAVTAWVALTFLPETVARFRTR 125 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P +++ + EG L LR G LD + G +F ++ L A+ R GHP Sbjct: 126 MPAIQLELFEGLLAIATPRLRDGSLDIYVGRQAPGVTTCDFNYQPLFATSRAVVARQGHP 185 Query: 181 AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAKSD 239 +RS+ LL+ W + + + ++ P+ + + ++L+ ++D Sbjct: 186 LADSRSLADLLENDWLVALDPQTEGQASYQMFARHGLPVPRSIHFLHSLTVAVALLKRTD 245 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 LS P + GL +P+ E L + +I R + I Sbjct: 246 MLSIFPWPLVELCAARDGLCAIPLREELEDSTVGIIMRTGEPADAASRCFIDCLIET 302 >UniRef50_C4ST67 Transcriptional regulator, LysR family n=2 Tax=Yersinia frederiksenii ATCC 33641 RepID=C4ST67_YERFR Length = 307 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 87/290 (30%), Positives = 137/290 (47%), Gaps = 1/290 (0%) Query: 6 KIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAG 65 KI+Q++ + + GSIR A++ L+ +QPA+++SIQELE+ L L R G LT G Sbjct: 6 KINQLKNLRAIIQYGSIRTAAQSLHQTQPAMTRSIQELEKILGVSLLVRGVHGAELTAMG 65 Query: 66 ESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVK 125 F +L+L EL A +++ Q + G + G + + +P VI F ++ + Sbjct: 66 RIFEPRMNLVLNELERAMDELEQIERSSEGLVTFGCSHLPALAFVPDVIKNFQTRYTTAR 125 Query: 126 VRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGAR 185 + + EGQL ++N LR G LDF I EF E L QFA+ R GHP + Sbjct: 126 ITVAEGQLSELLNSLRLGRLDFFIGLVSPEISLREFVDEHLAVAQFAVIARKGHPLANST 185 Query: 186 SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACIS-LVAKSDFLSKL 244 S+ +L W +PT +Y + L+ + P V+ + L+ D+L Sbjct: 186 SLSELQGAKWYLPTARAGFYNDIGSLIFPYGKEPTSSVIFGNSATIAEQLILNEDYLFVG 245 Query: 245 PEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 P+ M + ++PV E +P Y LI RR TP+ + R Sbjct: 246 PKVMATVSSLQDIISVIPVKEKMPDGHYSLIYRRQQSLTPMAKRFMDDIR 295 >UniRef50_A4XNT0 Transcriptional regulator, LysR family n=2 Tax=Pseudomonas RepID=A4XNT0_PSEMY Length = 307 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 86/291 (29%), Positives = 150/291 (51%), Gaps = 4/291 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K+HQ+RA + + GSI+ ASR+L++SQPALSK I+ELE L L R ++G+T+T+ Sbjct: 1 MKLHQLRALLAICESGSIQEASRLLHISQPALSKGIKELEAELGVPLLVRSNRGITVTEY 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE + A LILEE+R A+E+I +G + G++ IG+ + ++R+ +++P+V Sbjct: 61 GERLVRRARLILEEVRRAREEIESLKGTMDGKLAIGVSPVTPGAQFITSLNRYRKRYPRV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V+I E + +I LR+G+LD + + F + +L + + R GHP GA Sbjct: 121 QVQIHELRPSKLIEGLREGQLDLVLTSLPASRCSDGFHWTELFSQPAVLAVRKGHPLGGA 180 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQ-TPQVGVVCETFSACISLVAKSDFLSK 243 RS+++LLD W + ++ + + P+ + C + L +D +S Sbjct: 181 RSLRELLDEEWLL--QDSLELSKVGVMFEQHRIEPPRRIIECASVVLFSELALNTDTVSY 238 Query: 244 LPEEMGCDPLH-GQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 + GQ L +L + E +P L+ R T +L + Sbjct: 239 WSRRLLDHVQKLGQELQVLDLQEQVPPMNISLVCRDQELMTREAKTLADEL 289 >UniRef50_P52661 HTH-type transcriptional regulator gbpR n=1 Tax=Azospirillum brasilense RepID=GBPR_AZOBR Length = 342 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 62/285 (21%), Positives = 123/285 (43%), Gaps = 4/285 (1%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++K+ ++ FV + ++ A+ L MSQPA SK + +LEE L LF R +GV Sbjct: 15 RLKLRHLQLFVALDEHRNLHRAAASLTMSQPAASKLLGDLEESLGVTLFERHGRGVEPNW 74 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 G +HA IL L+ A E++ +G ++IG + + L+ VI+ + HP Sbjct: 75 YGGLMIRHARTILSGLQEAGEELNDLLAGHSGSVSIGTVMAPAVELVVPVITTLTRDHPD 134 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI- 182 +K+ + + +RQG +DF I F ++++ ++ CR GHP + Sbjct: 135 LKIAVAVETSDVLAERVRQGVMDFAIGRLPDHVDASCFDYQEISSEELCFVCRDGHPLLR 194 Query: 183 --GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLVAKSD 239 + L+D +W + ++ L + P+ + + +++VA++D Sbjct: 195 LGRPLTAADLVDATWILQPLGSLLRSRVEALFRAEGVPPPRKVIESASPVISLAMVAEND 254 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTP 284 ++ + ++P + Y + +D +P Sbjct: 255 SVTVFARALAQVFSPTGSCTIVPFHKRFSVEPYGIFWLKDRPLSP 299 >UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KYF2_THERP Length = 299 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 60/289 (20%), Positives = 119/289 (41%), Gaps = 4/289 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 V + Q++ F VAR S A+ L +SQPA+S I+ LE+ L LF R +GV LT Sbjct: 1 MDVSLRQLQVFRSVARHRSFSRAAEDLVISQPAVSAQIKSLEQVLGVPLFQRTGRGVELT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 +AG +A +L L A + + + GQ+ + + ++P + FH+ +P Sbjct: 61 EAGRQLLPYAERLLNLLDEALAAVHELRCAQRGQVRVAASTTAGIYVVPKALGAFHRAYP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 V++ + ++ L G+ D I + P + E+ L + + P H Sbjct: 121 GVELSLDVLNRFAVHQRLLAGDADVAIMGLIEDP--QDLEIEQFLPNELVVIASPRHHLA 178 Query: 183 GA--RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + ++ + + + + + +P+V + + A VA Sbjct: 179 RRHQIPLDEIAREPFLVREIGSGTRADMERIFAEAGLSPRVAMELRSNGAIKQAVAADLG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASL 289 ++ +P + L L++L V + + L++R + + +L Sbjct: 239 VAVMPRDAIGLELETGRLIVLDVQGFPVRRWWSLVRRAGRQPSAAADAL 287 >UniRef50_P52696 Uncharacterized HTH-type transcriptional regulator ybhD n=68 Tax=Proteobacteria RepID=YBHD_ECOLI Length = 317 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 67/293 (22%), Positives = 129/293 (44%), Gaps = 5/293 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + ++ ++AFV +A S A+++LN++QPAL++ I+++EE L QLF R ++ VTLT Sbjct: 1 MKHELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHVQLFERTTRKVTLT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 AG+ A ++++ +IR G + + + +P I +F++ +P Sbjct: 61 KAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKFNELYP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 +KVRI+E + + + E DF IN + F L+ + F + CR HP Sbjct: 121 NIKVRILEQGTNNCMESVLCNESDFGIN--MNNVTNSSIDFTPLVNEPFVLACRRDHPLA 178 Query: 183 GAR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + ++L+ Y + + L D+ S + LV Sbjct: 179 KKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTSLGLVEAGLG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 +S LP + ++ +P+ E + + +I+R+D+ +P Sbjct: 239 ISALP-GLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVLSPAAERFFALL 290 >UniRef50_B9XBB1 Transcriptional regulator, LysR family n=2 Tax=Verrucomicrobiales RepID=B9XBB1_9BACT Length = 299 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 73/293 (24%), Positives = 123/293 (41%), Gaps = 9/293 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ IR FV VA + S R A+ L+++QP LS I++LE L +LF R ++ V LT + Sbjct: 1 MELRHIRYFVAVAEELSFRRAAERLHLAQPPLSAQIKDLEGELGTKLFERTTRSVRLTAS 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G F A +L A++ +R+ + L G + IG+ A + S + ++ + Q P V Sbjct: 61 GRVFLDEARAVLAAAEKAEQRVRKAEHGLVGTLRIGVLAPTATSRLATILRSYRNQFPGV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + + E V + LR +LD + E F L E + GH Sbjct: 121 QFSLHEMTSVEQLQSLRLDQLD--VGLLRPPVAFPELDFHFLEESPMVLAVPAGHRLAKQ 178 Query: 185 R--SIKQLLDYSWTM--PTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 R K + M P+ YY L TP VG + + L++ Sbjct: 179 RLIEWKDFHNEPMVMIHPSLQHGYYDTFLNLCAKAGSTPIVGQYANDVHSKMWLISAGFG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 ++ P + GLV + LP ++ +R + +P+ + I F Sbjct: 239 VA--PTTKTIAEVKRPGLVFRELPPGLPLVQTLIVWKR-TNNSPMVGNFIECF 288 >UniRef50_A7ZNW2 Transcriptional regulator, LysR family n=40 Tax=Enterobacteriaceae RepID=A7ZNW2_ECO24 Length = 318 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 63/299 (21%), Positives = 129/299 (43%), Gaps = 5/299 (1%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 A ++K+H ++ V + QG++ +RM++++QPALSK + LE+ + LF R SKG+ Sbjct: 21 AQKLKLHHLQMLVALGEQGNLTHVARMMHITQPALSKWLSHLEDEIGLTLFERHSKGLRP 80 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQR-QGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 T+ G+ QHA ++ ++ +Q ++ + QG L G + IG ++ + I ++ Sbjct: 81 TEGGKLLLQHAQRLINDMERSQHELARFKQGGLVGSLKIGCSP-VATDCVSQAILHLLKE 139 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P + + I E + ++ +L G +D + + L + RP HP Sbjct: 140 MPTLHLNIEEKVMTPLLQDLLAGSVDVVVGRIGGRALQLPLNYRVLYTEPVCFVARPEHP 199 Query: 181 AI--GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQ-TPQVGVVCETFSACISLVAK 237 S L ++ W + + L D P+ + + + +L+ Sbjct: 200 LAKYAILSWNDLANWRWIVWPTGTPIRISIDNALVDHGVMLPENTIESASMNVSTNLLQS 259 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 SD +S L + LV+L + +I K + + R + + + + ++ Sbjct: 260 SDMISILSLRLAQRYASQGQLVILNLPKIEQKGSVGVFWRNNETPSYALSQFLHFLQQN 318 >UniRef50_Q7WJM8 Probable LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7WJM8_BORBR Length = 323 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 64/283 (22%), Positives = 115/283 (40%), Gaps = 4/283 (1%) Query: 17 ARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHASLIL 76 G++ + +SQPALSK +++LE + +LF R +GVT T HA I+ Sbjct: 41 CETGNLTEVANEYGISQPALSKWLKDLEADIGQRLFVREPRGVTPTACARELQAHARAII 100 Query: 77 EELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQLVSM 136 L A+ + AG +++G + ++P I RF +P V V ++E + + Sbjct: 101 GRLERARTAVDHIASGFAGHLSVGFSPVVGPVVLPESIRRFRAAYPDVLVSVIEASIDLL 160 Query: 137 INELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGAR--SIKQLLDYS 194 + LR G+ D + + + E L ++ + HP G R S + Y Sbjct: 161 LPGLRNGDFDIVVGRLEEVAMPEDVRCETLYDEPVCLVAGRAHPLAGRRRISWEDAQAYP 220 Query: 195 WTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAKSDFLSKLPEEMGCDPL 253 W P +L L Q P+ V + ++L+ +SD ++ + + Sbjct: 221 WISPQQGTPLRMRLEMELAVAGQPLPRHAVESTSVQTNVALLDRSDMIAPMSRRLAEHFQ 280 Query: 254 HGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 L +LP++ + ++ R D TA I R+ Sbjct: 281 RQGVLRILPLT-LGSGGPIGMLWRADGVHGTHTAHFIACLRQA 322 >UniRef50_A3K7Z5 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Sagittula stellata E-37 RepID=A3K7Z5_9RHOB Length = 333 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 69/288 (23%), Positives = 127/288 (44%), Gaps = 8/288 (2%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++++ Q+R F+ VA + + A+ + ++QP LS+ I LE+ L +L R + V+LT Sbjct: 28 RIELRQLRYFLAVAEELNFTRAAEKMGIAQPPLSQQILVLEQQLRVKLLNRSRRHVSLTP 87 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 GE+F +A I+ + A E + + G +++ S +++P + F QHP+ Sbjct: 88 EGEAFILYARRIINNTQIAAELVGAIKRGEEGPLSVAAIFSSIYTVVPQLFEAFVAQHPR 147 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V+ + E + + LR+ +D I E LLE+ F + HP Sbjct: 148 VRFHLQEMTIGQQLVALREERIDLGI--LRGPIIHPEIETHTLLEEPFVVVVSKKHPLAK 205 Query: 184 AR--SIKQLLDYSWT--MPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 + Q+L +P+ + Y Q+ +L ++ TP + + LVA Sbjct: 206 QTILTADQVLSQPLIRVIPSVNRDYSHQMFSVLANRNTTPNIVHEVSDTHTLLGLVAAGM 265 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTA 287 +S +P + +H L +P+ E P + L +DS T L Sbjct: 266 GISMVPASV--RSIHTDQLRYIPLREGTPTSTIQLAWLKDSDSTSLPR 311 >UniRef50_Q39PG2 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q39PG2_BURS3 Length = 315 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 79/290 (27%), Positives = 131/290 (45%), Gaps = 1/290 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K+HQ+RA V VAR GSI A+R L+++QPA+++S+++LE+ L L R S GVTLTDA Sbjct: 1 MKLHQLRALVAVARSGSIHEAARTLHLTQPAVTRSLRDLEDELGLMLVARSSSGVTLTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + + A L++ E+ +E++ Q + G++ IGM +++PA +RF + P V Sbjct: 61 GRAMLRRAELVVNEVARTEEEMAQLRENRQGRLAIGMTPLAGITVLPAAYNRFRRAMPDV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ +EG ++ +L+ G LDF + E L GA Sbjct: 121 QLEFVEGSPSQLVEQLKNGALDFALGAGADAQDFTSVRCEHLDSFPMWFAVSRKGKLAGA 180 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLVAKSDFLSK 243 S+ L D W P + L+EL P+ C + + +L SD ++ Sbjct: 181 TSLADLQDAEWLHTGPSTEFRAFLAELFAQAGLPAPRRVTRCASQTLFYALAVNSDVVTA 240 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 + L L + P YL+ R + T + Sbjct: 241 WTQLALRGEDASDTLKTLDLVGQPPARNLYLLFRDSAVLTASAEYFVRCI 290 >UniRef50_P25544 RuBisCO operon transcriptional regulator n=13 Tax=Proteobacteria RepID=RBCR_CHRVI Length = 302 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 71/301 (23%), Positives = 129/301 (42%), Gaps = 5/301 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 V + Q+R F VAR S A+ L++SQPA+S +++LE+ + LF R K V LT Sbjct: 1 MHVSLRQLRVFEAVARHNSYTRAAEELHLSQPAVSMQVRQLEDEIGLSLFERLGKQVVLT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 +AG + ++ I + LR +E + +G G + I + +++ P +++ F Q+H Sbjct: 61 EAGREVFHYSRAIGQSLREMEEVLESLKGVSRGSLRIAVASTV-NYFAPRLMAIFQQRHS 119 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 + +R+ S++ L +D + P + E E ++ + P HP Sbjct: 120 GIGLRLDVTNRESLVQMLDSNSVDLVLMGV--PPRNVEVEAEAFMDNPLVVIAPPDHPLA 177 Query: 183 GAR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 G R S+ +L + ++ M + + ++ QT + G+ A V Sbjct: 178 GERAISLARLAEETFVMREEGSGTRQAMERFFSERGQTIRHGMQMTRNEAVKQAVRSGLG 237 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 LS + L + LV L V + +YL+ RR R +P + E + Sbjct: 238 LSVVSLHTIELELETRRLVTLDVEGFPDRRQWYLVYRRGKRLSPAAGAFREFVLSEAARM 297 Query: 301 Q 301 Sbjct: 298 H 298 >UniRef50_C3LMU4 Transcriptional regulator, LysR family n=65 Tax=Gammaproteobacteria RepID=C3LMU4_VIBCM Length = 296 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 8/296 (2%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 + +++ Q+R FV VA S A++ L+++QPALS SI++ E+ L LF R + V L Sbjct: 5 GYMMEVRQLRHFVTVAEWESFTLAAQQLHIAQPALSISIKKFEQQLGVTLFKRDERKVAL 64 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T GE +HA IL+++ AQ + + +G + G++ +G + + P +I F Sbjct: 65 THEGEVLLEHAKRILQQVNDAQLAVDELKGVVKGEVRLGAPSMMGSYFFPQIIMAFKSHF 124 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P +K+ ++E S+ L GELD + + P D + LL Q H Sbjct: 125 PNLKMTVIEAGTQSIRRMLLSGELDIGVILNHDLPDD--LAADPLLSSQMVAVVGKNHEL 182 Query: 182 IGAR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 R + + ++ M P + + ++ + T +S+V Sbjct: 183 AERRHLTFAEFFEHELVMFKPGYFHRDFIDKVCREHKFTADFSFETNLLPMILSIVKHEY 242 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 ++ L E + + + +P + L R++ + + I ++ Sbjct: 243 AITALLELVTSNE---PEVKAIPFEPPVW-LDLALAWRKEGYLSNADRTFIEFVKK 294 >UniRef50_Q39P96 Transcriptional regulator, LysR family n=3 Tax=cellular organisms RepID=Q39P96_BURS3 Length = 311 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 91/296 (30%), Positives = 150/296 (50%), Gaps = 1/296 (0%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 +K HQ++A++ + GSIRGA+R L++SQ A++K+I+ELE+ L A L R ++GVTLT+ Sbjct: 15 DMKDHQLKAWLALVETGSIRGAARHLHLSQAAVTKAIRELEQDLEAPLISRSTRGVTLTE 74 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 G+ A L +L A++DIRQ G G +++ + + ++P VI RF ++ P Sbjct: 75 CGQQLTVRARLAQAQLTLARQDIRQILGGKHGHVSVAVTPMVFLGVLPGVIERFRKRMPL 134 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 K+ + EG + +++ LR G +DF + EF FE L + + CR GHP Sbjct: 135 AKLTVEEGMMPHVLHALRDGSIDFAVAAPADEEVKGEFHFEPLQVMETVVACRRGHPLET 194 Query: 184 ARSIKQLLDYSWTM-PTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 A QL+ +W M +P + L L P V TF +L+ +SD L Sbjct: 195 ATEWHQLVGCTWVMNLSPGSQHSNLLDHLRRTHHALPDSIVRVNTFGVGWNLMTRSDALL 254 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 P EM + +P+ LP +++ RD+ + +L+ FR++ Sbjct: 255 SCPAEMLAVEPYAAQACRIPLRMALPPLTLGILKLRDAPLSLAAETLVALFRQDLA 310 >UniRef50_B2Q0Q6 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q0Q6_PROST Length = 295 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 69/287 (24%), Positives = 134/287 (46%), Gaps = 7/287 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I +R FVEV + A+ L ++QPA+S+SIQ+LE+ L L R + GV LTD Sbjct: 1 MDIRSLRYFVEVVQLNGFSRAAERLFVTQPAISRSIQKLEQELGYTLLVRENDGVRLTDE 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE HA IL++ + + +++++G L+G +N+G+ I+ + +I F +++PQV Sbjct: 61 GEILLSHAKQILKQFNSMNKALKEKEGPLSGILNVGLPPVIASTYFADIIMAFSRRYPQV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLL-EKQFAIFCRPGHPAIG 183 +++I+E M+ + GE++ P+D+E + + + HP Sbjct: 121 ELKILELGTHKMMEAMLNGEVE---TAAVMLPFDNELFDLHVFSSDRLMLLVSEQHPLAM 177 Query: 184 ARSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 S+K +L+D + + + + + P + ++V + Sbjct: 178 RNSVKFAELIDEPFIFFSEDFRINELVMSACGIYGKKPVIAGRSSHLDLVTAMVRAGVGV 237 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTAS 288 + LP+ M + GL ++PV E + L ++S Q+ + Sbjct: 238 TLLPDSM-WNKTRADGLSIIPVIEPVLSYEVALATLKNSHQSRRAKA 283 >UniRef50_P0ACQ6 Hydrogen peroxide-inducible genes activator n=273 Tax=cellular organisms RepID=OXYR_ECO57 Length = 305 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 111/292 (38%), Gaps = 4/292 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I + V +A R A+ ++SQP LS I++LE+ L L R S+ V T A Sbjct: 1 MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G A +L E++ +E Q+ ++G ++IG+ ++ L+P +I HQ P++ Sbjct: 61 GMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKL 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + E Q ++ +L G+LD I + F L ++ + HP Sbjct: 121 EMYLHEAQTHQLLAQLDSGKLDCVILALVKE--SEAFIEVPLFDEPMLLAIYEDHPWANR 178 Query: 185 R--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + L M Q + + ++VA ++ Sbjct: 179 ECVPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGIT 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 LP G+V LP + P+ L+ R S L R Sbjct: 239 LLPALAVPPERKRDGVVYLPCIKPEPRRTIGLVYRPGSPLRSRYEQLAEAIR 290 >UniRef50_Q04778 HTH-type transcriptional regulator alsR n=87 Tax=Bacillus RepID=ALSR_BACSU Length = 302 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 113/292 (38%), Gaps = 9/292 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ ++ F+ VA + A+R LNM+QP LS+ I++LEE + L R + V LT A Sbjct: 1 MELRHLQYFIAVAEELHFGKAARRLNMTQPPLSQQIKQLEEEVGVTLLKRTKRFVELTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE F H + L ++ E ++ G + IG S + +P ++ + ++ P V Sbjct: 61 GEIFLNHCRMALMQIGQGIELAQRTARGEQGLLVIGFVGSATYEFLPPIVREYRKKFPSV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 K+ + E EL +G +D I + E + HP Sbjct: 121 KIELREISSSRQQEELLKGNIDIGI--LHPPLQHTALHIETAQSSPCVLALPKQHPLTSK 178 Query: 185 RS--IKQLLDYSWTMPTPHG--SYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 S I+ L D + Y + + P + + I LV+ Sbjct: 179 ESITIEDLRDEPIITVAKEAWPTLYMDFIQFCEQAGFRPNIVQEATEYQMVIGLVSAGIG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQ 292 ++ +P L + + +I A + + R+D+ PL I Sbjct: 239 MTFVPSS--AKKLFNLDVTYRKMDQIQLNAEWVIAYRKDNH-NPLIKHFIHI 287 >UniRef50_Q46NY0 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46NY0_RALEJ Length = 303 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 86/295 (29%), Positives = 129/295 (43%), Gaps = 1/295 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K H +RA V +A GSI A+R L ++QPA++K+++ELE L R S GVTLT+ Sbjct: 1 MKHHHLRALVAIADHGSINAAARALCLTQPAITKAMRELETEAGVPLLARNSWGVTLTND 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++ A LI+ E+ A+ ++ QR+G ++ IG+ SL+P SRF + P V Sbjct: 61 GQALLARARLIVCEIERAEAELAQRRGINESRLRIGVSPLPGISLLPPAFSRFRRVMPDV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 V +E + LR G++DF + D + +L + R G P GA Sbjct: 121 SVDFLEFDPPRLQEHLRNGQVDFGLTATQVLAADPFLEYSELSVYPTSFVVRAGSPLAGA 180 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACIS-LVAKSDFLSK 243 S+ L D W SY L+ L P V T + S L+ ++D + Sbjct: 181 TSLADLQDAEWLHQDASNSYPVYLAGLFGRHGLPPPRRVTRSTSNVLFSTLMLETDAVVP 240 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 L P L L + E P L+ R + T I R G Sbjct: 241 LSLASVRSPYIASLLTPLALPENPPDIQVALVLREGAILTRTADYFIHCIRESTG 295 >UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=Actinomycetales RepID=C7PVI0_CATAD Length = 297 Score = 236 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 64/288 (22%), Positives = 114/288 (39%), Gaps = 5/288 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ HQ+R F+ VA A+ L+++QP+LS+ I+ LE L A LF R +TLTDA Sbjct: 1 MQFHQLRYFIAVAETRHFTRAAEALHVTQPSLSQQIRALEHELGADLFLRARGNITLTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+ A IL + AA+ ++++ G + +G S+ L+P V+ +H+++P + Sbjct: 61 GEALLPMARRILADADAARREVQELAELRRGHVRLGATPSLCTGLLPDVLRTYHRRYPGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG- 183 ++ + E ++ +L +G LD + T E+LL + + P P G Sbjct: 121 QLLVQESGSHDLVRDLARGALDLALVVLPLPSPSPALTTEELLREDLVVVSAPNLPPPGD 180 Query: 184 --ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 I L M Q P + A + + Sbjct: 181 GRQVRIADLEHEQLIMFRHGYDLRDLTVAACRAQGFEPVFAIEGGEMDAVLGFARAGLGV 240 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASL 289 + +P + + L + P++ L R D Sbjct: 241 AIVPSMVAQN--VDPSLRVTPIAPPALHRTIALAHRTDVALPRAAQEF 286 >UniRef50_Q4KE95 Transcriptional regulator, LysR family n=7 Tax=Pseudomonas RepID=Q4KE95_PSEF5 Length = 303 Score = 236 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 71/292 (24%), Positives = 130/292 (44%), Gaps = 4/292 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + + F +A G + A++ LN SQPAL+KSIQ LEE +LF R +G+ LT Sbjct: 1 MDLRDLTYFDTIAELGHLGRAAQKLNRSQPALTKSIQRLEESFGTKLFEREGRGIKLTAV 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE + + + + + ++R + G I +G AS++ L+P + + ++ P + Sbjct: 61 GELLQRRSRQLQQNIAETHREVRDFASGVLGNIRLGCAASMAEHLLPQMTATLLERAPDI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + ++ GQ + LR G LD I ++G D + L E + + HP Sbjct: 121 TLNLVIGQDDLLRESLRSGRLDMVICPMFEG--DPHLSHHTLFEDRAVVVASRDHPIFAT 178 Query: 185 R-SIKQLLDYSWTMPTPHGSYYKQLSELLDDQ-AQTPQVGVVCETFSACISLVAKSDFLS 242 ++ L Y W +P S + + + P V + T S L+AK+ LS Sbjct: 179 PMRLRDLCAYRWVLPGTRVSARRWIDNVFQSHELPLPSVQIETNTISLLPRLIAKTGLLS 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 L E D L +P+++ + + ++ R + +P +L+ + Sbjct: 239 FLARETLDDFKGIAHLREVPLAQTCMRRSIVVLVRAEGYLSPAAQALLDLLK 290 >UniRef50_Q0K3Z3 Transcriptional regulator, LysR-family n=1 Tax=Ralstonia eutropha H16 RepID=Q0K3Z3_RALEH Length = 297 Score = 236 bits (604), Expect = 6e-61, Method: Composition-based stats. Identities = 81/297 (27%), Positives = 132/297 (44%), Gaps = 4/297 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++I Q+ V + ++ + LNM+QPALS+ + ELE L LF R S+G+ T Sbjct: 1 MRIRQLHVLVALHETRNVSRTAARLNMTQPALSRWLAELESELGVALFERHSRGLVPTRF 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 E+ HA IL E+ Q IR AGQ+ IG ++S L+P+ ISRF ++ P Sbjct: 61 CEALVVHARTILNEIERTQATIRVMAEGAAGQLAIGATPTVSVDLLPSAISRFRERFPDA 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + + EG + M+ LR+G LDF + D E + L + + P HP Sbjct: 121 HLTLAEGTVEDMLPALREGRLDFVMGRTEVQGIDGELRCDLLYPETIRVIAGPTHPLARK 180 Query: 185 RSI--KQLLDYSWTMPTPHGSYYKQLS-ELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 R + Y+W P ++L EL P V + T A +SL+ + + L Sbjct: 181 RKVGWADTRAYTWVGPPVTSQIRRELDYELALAGEPAPCVRIESATLLANVSLLQQGELL 240 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 + + M + +L + + +++RRD+ QTPL + + Sbjct: 241 AVMSGRMAAFFSRLGQVAILRL-PYRREGMVGVLRRRDTEQTPLRQAFMDALAASAH 296 >UniRef50_P94678 LysR type regulator of tsaMBCD n=1 Tax=Comamonas testosteroni RepID=P94678_COMTE Length = 298 Score = 236 bits (604), Expect = 6e-61, Method: Composition-based stats. Identities = 87/287 (30%), Positives = 149/287 (51%), Gaps = 1/287 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K+ ++A + + GS+R A+++L++SQPALS +IQ+LE+ L A L R +GV+LT Sbjct: 1 MKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSF 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++F +HA LI+ E R AQE+I Q +G+ G I +I+ + +P ++ F ++ P V Sbjct: 61 GQAFMKHARLIVTESRRAQEEIGQLRGRWEGHITFAASPAIALAALPLALASFAREFPDV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 V + +G ++ +LR G LDF + ++ D + + L I + HP A Sbjct: 121 TVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDIDTDLEAQPLYVSDVVIVGQRQHPMANA 180 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAKSDFLSK 243 + +L + W + + P++G+VCE+F A +VA SD L+ Sbjct: 181 TRLAELQECRWAFSSAPRGPGAIIRNAFARYGLPEPKLGLVCESFLALPGVVAHSDLLTT 240 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLI 290 +P + L +P+ + LP Y+++R D TP A LI Sbjct: 241 MPRTLYERNAFKDQLCSIPLQDALPNPTIYVLRRHDLPVTPAAAGLI 287 >UniRef50_B0RTV9 Transcriptional regulator, LysR family n=11 Tax=Proteobacteria RepID=B0RTV9_XANCB Length = 345 Score = 236 bits (603), Expect = 7e-61, Method: Composition-based stats. Identities = 74/299 (24%), Positives = 135/299 (45%), Gaps = 3/299 (1%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 A ++K Q+ + + Q S+ A+ +M+QPA SK + E+E+ L +LF R ++GV Sbjct: 33 AARLKTRQLLLLLHLHEQRSVLRAAEAASMTQPAASKLLAEMEDMLGVKLFERHARGVEP 92 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T G + A + E+ AQE+I + GQ +IG + +L+P I+ ++ Sbjct: 93 TWYGHVLIRRARAAMSEIGRAQEEIAALRAGRMGQASIGTVVNPGTNLVPQAIAEVKREF 152 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P + VR+ ++ +L G+LD I E FE L ++ ++ R GHP Sbjct: 153 PDILVRVEMDYSRPLVAKLLDGQLDIVIGRILGPEGVGELEFEPLADEPHSVIARAGHPL 212 Query: 182 IGARSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLVAKS 238 ++ L+ + W +P +L + + QTP + + +L+ S Sbjct: 213 ASRANLQHADLVRHGWILPPADSVLRARLDSMFMEHGVQTPTNAIETSSLPVTSTLLRGS 272 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 D L+ LP E + + L +LP+ + ++ +I+RRD P ++ R Sbjct: 273 DMLTALPVESVAPLIQAKLLTVLPIELGVRMESFGIIRRRDYILPPGAERILQALRSTA 331 >UniRef50_C0Z7P7 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z7P7_BREBN Length = 290 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 67/292 (22%), Positives = 132/292 (45%), Gaps = 7/292 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I Q+R F+ +A +G I GA++ LNM+QP LS+ ++++EE L L R K + LT+A Sbjct: 1 MDIRQLRYFIAIAEEGQITGAAKRLNMAQPPLSQQLKQMEEELGTMLVERSGKQIVLTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + Y+ A I+ ++ A ++++ + G ++IG+ ++S +P I F Q++P + Sbjct: 61 GITLYKQALNIVHQMEEALSEVKETGEGIRGTLSIGVS-ALSAYRLPEQIRVFQQKYPLI 119 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +I +G + L + ++ I + T L E+ F + P Sbjct: 120 TYKIWKGDTQLLNQWLERRTIEVAIVRLPHS--LNNCTMIPLEEEDFVLIVPATSPYADR 177 Query: 185 RSI--KQLLDYSWTMP-TPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 ++I +++ + MP TP Y + + P V C S +S+VA S Sbjct: 178 KAIEMREIAELPLIMPSTPGLGIYDLIIKEFSRLGVEPHVICECPDISLIVSMVASSVGS 237 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 S +P + + + + +S ++ ++ + + I F Sbjct: 238 SIVPIS-AWETHQSEQIRGIRLSGTSIYSSAAVVWQSGRHLSKAANRFIETF 288 >UniRef50_B9XJ57 Transcriptional regulator, LysR family n=2 Tax=bacterium Ellin514 RepID=B9XJ57_9BACT Length = 301 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 64/295 (21%), Positives = 128/295 (43%), Gaps = 6/295 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R F+ VA + A+R L ++QPALS+ +Q+LE+ + L R +GVTLT Sbjct: 1 MELRHLRYFLAVADALNFTKAARQLRIAQPALSRRVQDLEDEIGVDLLKRSPRGVTLTAE 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F + +L+ + E +R G ++IG S + ++P ++ + + P V Sbjct: 61 GKLFLEKTRQLLKMADESVEQVRALARGQFGSLHIGYAPSPTVEILPPALAAYQRAFPHV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA--I 182 V + + +++ L+ G L + FE L + + P HP + Sbjct: 121 NVLLHDASRREIVDGLQDGTLQLAVLPEVVNMEAEGIEFEPLRSYPYYVALSPSHPLTRL 180 Query: 183 GARSIKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 A ++++ + H YY + + TP++ V C++ S+ I+ V Sbjct: 181 KAIPLEKIANEPLVGFARHDYPDYYPFVERIFRPLGVTPKIAVECDSGSSLITAVETGRG 240 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 +S + G+ LV+ PV+ + + + ++ TP R+ Sbjct: 241 VSL--AMSVFKVVTGKRLVLRPVAGSKDEIPVGIARAKNGDLTPAGEKFCEFLRK 293 >UniRef50_Q12AP3 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=Q12AP3_POLSJ Length = 303 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 7/295 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R FV +A + A+ ++++Q LS I++LEE + LF R K V +T+ Sbjct: 1 MELRHLRYFVALAECLNFTRAAERVHITQSTLSHQIRQLEEEIGELLFERVGKRVLITER 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE F +A+ L+E+ +++ L G++ IG + ++ +P I+ +HP V Sbjct: 61 GELFLSYAAKALKEVDQGVAALKESARGLTGKLRIGSTHTFNQGFIPECIATLLVRHPTV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 KV E + L G LD I+ Y+ + FE L +Q + P HP G Sbjct: 121 KVAASEFTADDIGERLASGALDLGIS--YRPRTVGDLWFEPLYNEQMVLVVSPQHPLAGR 178 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + I+ +L + + L E P V V T + ++LV ++ + Sbjct: 179 KRIRLVELHRQPLVLLPEAFATRAMLDECFRACDAEPLVVVEMNTLAPMLALVERTQIGA 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 + E D L +P+ P ++ +RD +T + + R Sbjct: 239 IVSENAVRDR---STLRAVPLESPTPMRTPGILWKRDVDKTAPMRAFASIVRAIA 290 >UniRef50_Q0K1W4 Transcriptional regulator (Transcriptional regulator, lysr-family) n=3 Tax=Burkholderiaceae RepID=Q0K1W4_RALEH Length = 329 Score = 236 bits (602), Expect = 9e-61, Method: Composition-based stats. Identities = 72/299 (24%), Positives = 138/299 (46%), Gaps = 3/299 (1%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 + ++ + +R + +A S+R A+ + +SQPA++K++ ELE + LF R ++G+ Sbjct: 14 LRKRLHMRHLRLALALAEHRSLRRAAAQMALSQPAVTKALHELESVVGTLLFTRHARGIE 73 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 T GE+ ++A ++L +L A ++ G++ +G + S++ VI+ + Sbjct: 74 PTVFGEALIRYARVVLADLDALHDEFAAIAAGEVGKVRLGSILAPVPSVLSGVINALKAR 133 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 +P++ + + ++ LRQ LD I +G + FE L E+ AI R GHP Sbjct: 134 YPRLHIVMQVDTSDVLVQALRQDALDVVIGRIPEGTVADDLDFEPLFEESLAIVARAGHP 193 Query: 181 AIGAR--SIKQLLDYSWTMPTPHGSYYKQLSELLDD-QAQTPQVGVVCETFSACISLVAK 237 G R + L Y W +P ++ + + D + P+ + + + L+A Sbjct: 194 QAGKRGVKLASLAGYPWIIPPAAVPMWQIIDQTFRDNRVPLPEDIIETSSIMGTLPLLAD 253 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 SD ++ +P + + L +LPV+ Y ++ RR TP LI R Sbjct: 254 SDRIAVVPGAIAEYFVALGALAVLPVAMRGRLVPYGIVLRRRRAATPAMRLLIDAVRAA 312 >UniRef50_C6BXQ9 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BXQ9_DESAD Length = 301 Score = 236 bits (602), Expect = 9e-61, Method: Composition-based stats. Identities = 69/296 (23%), Positives = 125/296 (42%), Gaps = 8/296 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ Q++ F+ VA + A++ L +SQP LS+ I++ E+ L +LF R + V LT A Sbjct: 1 METRQLKYFLAVAEELHFGRAAKRLFISQPPLSQQIKKFEDELGVKLFQRNKRSVALTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G S + A I+ + A+ ++ GQ +G + + +I F Q+P V Sbjct: 61 GVSLLRDAPGIMRAIGRAKSNLLDAATGEGGQFTLGYIGPALETTLTEIIRDFKGQYPSV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI-- 182 ++ + E + +R G++D I ++ + E + +A+ GHP Sbjct: 121 RLDLREMFTTDQLKAIRSGDIDAGIVRLFRHDV-SDLERELFHRESYALVVPDGHPLADR 179 Query: 183 GARSIKQLLDYSWTMPTPHG--SYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 A + +L + G Y + + + P V SA ++LVA + Sbjct: 180 AAVDVSELAGEQFIFFPREGQPRLYDEWMRVFSEAGFVPDVVQEATRKSATVALVAANMG 239 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 + +PE M + QG+V +S P LI R + P + I R+ Sbjct: 240 IGIVPESMAR--IKPQGVVFKRLSGDFPVIEMSLIYRS-TNGFPAVDNFIAAVRQN 292 >UniRef50_C1F961 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F961_ACIC5 Length = 288 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 60/288 (20%), Positives = 121/288 (42%), Gaps = 7/288 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ HQ+R +A G+ A+ ++QP+LS+ + +LEE L +LF R + + +T+A Sbjct: 1 MEFHQLRYVCAIAETGNFSRAAERCQVAQPSLSQQVLKLEEDLGVKLFDRLGRSLRITEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +F HA IL ++ AA+ + + + G + +G+ +I+ LMP + F +++P+ Sbjct: 61 GRAFLPHARSILHQMEAARASVAGKSKDVRGSVAVGVIPTIAPYLMPRYTAAFARKYPEA 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++RI+E ++ LR +D + + LL + HP A Sbjct: 121 RLRIVEETTPVLVESLRNLSIDLAVLAL--PLRHKDLECIPLLTEPMFAVLPKDHPRASA 178 Query: 185 R--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + S+K L ++ M + TP++ F + +VA +S Sbjct: 179 QTLSLKDLRGETFVMLRDGHCFRDLSLAACSHARVTPRIAFESGQFRSLFGMVAAGMGVS 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLI 290 +P+ G + +S+ R + + + Sbjct: 239 LVPQMAMDR---SAGCAYVRLSDARAARTVVAATLRGRSFNHMQQAFL 283 >UniRef50_A3I8L6 Transcriptional regulator, LysR family protein n=1 Tax=Bacillus sp. B14905 RepID=A3I8L6_9BACI Length = 292 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 61/292 (20%), Positives = 130/292 (44%), Gaps = 7/292 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++I + F+ V + A+ L +SQP LS+ I+ LE+ L LF R K + +T+A Sbjct: 1 MEIRHLHYFMAVCEELHFTKAAEKLGISQPTLSQQIRVLEDELGMPLFDRIGKKIVVTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + +A+ +L L+ + I+ Q GQI +G+ S + ++ FHQ+ P+V Sbjct: 61 GALLFTYATAMLNTLQNVKGAIKDLQEVQGGQIRVGIMPSDLDYRITQLVIDFHQKFPRV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 K+ I+ + ++ ++ + E+D I T + L ++++ + HP Sbjct: 121 KLTIL--ASIDIMRQVLENEVDIGIGTNVEP--HDRLVIIPLRKEEYVVTVSKEHPWAHR 176 Query: 185 R--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 +I +L D M + + E + + + ++ ++LV + + Sbjct: 177 EAVTIAELKDLPLVMYPEGFLGREIVEETVKKHGFQLHTILETSSVTSIMNLVRANIGAT 236 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 P + ++ L ++ +++ +P + +I R D + T + I Q + Sbjct: 237 VQPYPLI-QQMNDSDLRIIRLTDTIPSRSLSIIYRVDRYVSHATTAFIEQIK 287 >UniRef50_Q1AYT0 Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AYT0_RUBXD Length = 293 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 133/294 (45%), Gaps = 9/294 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ IR FV A + A+R L+++QP+LSK + LE L +LF R + V LT+A Sbjct: 1 MELSHIRYFVAAAEELHFGRAARRLHVTQPSLSKRVAGLERELGVRLFHRTRREVRLTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE F + A +LE+ A E+ R+ G++ IG + ++P ++ +H++ P+V Sbjct: 61 GEIFLEGARRVLEDALRAAEEARKAGRGELGRLEIGFFSPAIYGVLPEILKEYHERFPEV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V + E + +R+G+++ I + F E + + GHP Sbjct: 121 RVTLHEWTSSVQLERMREGKIE--IGFMRAPVEEAGFVTEHVFVEPVVAALPEGHPQARR 178 Query: 185 R--SIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 S ++L D + M + + + + +P++ A + LVA Sbjct: 179 EVVSPRELADEPFIMVPRSKEPNSFDRYVSICQRAGFSPKITQEVFEIHAIVGLVATGMG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 ++ + + L G+V P+ + + ++ RR SR +P+ + + + Sbjct: 239 VAFVQGSVA--NLKRPGVVYRPLDDPEARIGTAIV-RRSSRPSPVLRTFLETLQ 289 >UniRef50_D1VD43 Transcriptional regulator, LysR family n=1 Tax=Frankia sp. EuI1c RepID=D1VD43_9ACTO Length = 361 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 108/292 (36%), Gaps = 7/292 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 V++ Q+ FV VA A+ ++++QP+LS I+ LE L + LF R +TLT A Sbjct: 19 VQLQQLAYFVAVAETKHFTRAAARVHVAQPSLSAQIRALETELGSPLFNRARGNITLTAA 78 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+ A IL + A+ ++++ G + +G S+ ++P V+ F Q++P + Sbjct: 79 GEALLPLARKILADADMARREVQELTDLRRGTVRVGATPSLCTGMLPEVLRLFRQRYPGI 138 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP---A 181 ++ + EG ++ EL G LD + D LL + + P P Sbjct: 139 QLLVEEGGSRDLVGELAVGALDLALIILPLQGSDPALATAPLLREDLVVISSPDGPPPVR 198 Query: 182 IGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 +++ L D M P + A V + Sbjct: 199 TAQMAVEDLRDRPLVMFRRGYDLRDFTVGACRAAGFEPTFAIEGGEMDAVCGFVMAGLGI 258 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 + +P + Q L P + L RRD L Sbjct: 259 AVIPSMVAFR----QPLRTTPFAAPGLHRTIGLAHRRDVEPPRAARELRATL 306 >UniRef50_Q1AVR3 Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVR3_RUBXD Length = 305 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 78/297 (26%), Positives = 131/297 (44%), Gaps = 9/297 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+R FV VA + S GA+R L +SQP LS I+ LE L +LF R ++ V LTD+ Sbjct: 1 MELRQLRYFVAVAEEQSFGGAARRLRISQPPLSLQIKALERELGVRLFDRNTRRVMLTDS 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +F + A +ILEE+ A+E + + L G++ +G +S + SL+P I F ++ V Sbjct: 61 GRAFLERARVILEEVERAKETAKGAERGLLGKLEVGFVSSATLSLLPPAIRLFRERFGGV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA--I 182 ++ + E I+ L GE + E + E++ + GHP + Sbjct: 121 ELELRELTSAQQIDALYNGETRVGLVRL--PLRAPGIHLEPVFEERLVVALPSGHPLEAL 178 Query: 183 GARSIKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 S++ + D T + Q+ EL P V + LVA Sbjct: 179 DRVSLEAIADLPLIFFTRQLIPGLHAQIIELFQRVGAFPNVAQHAVHLQTIVGLVASGVG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 +S LP + +G+V LP+ E + L + L + ++ R Sbjct: 239 ISILPSSAMR--VRREGIVYLPLDEDDATSWLGLAWVEGDD-SVLVENFVSIVREVA 292 >UniRef50_A4F7Y9 Transcriptional regulator, LysR family n=3 Tax=Actinobacteria (class) RepID=A4F7Y9_SACEN Length = 333 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 64/293 (21%), Positives = 132/293 (45%), Gaps = 10/293 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R FV +A + S+ A+ L+++QP LS +++LE L A L R ++G LTDA Sbjct: 1 MELRHLRYFVAIAEEQSLTRAAARLHIAQPPLSAQLRKLETELGAVLVHRTARGTQLTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + A IL E+ A + R+ G++++G S S ++P ++ +F ++P+V Sbjct: 61 GRVLLEEARRILHEVDHAAQMTREAGSGRVGRLSLGFIPSASNVVLPPILRQFKARYPEV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++R+ E + ++ L +D +Y D + + + HP + Sbjct: 121 RLRLREMRPDEIVERLHDRRIDA--GFFYLPIDDPSLHVRSVADDSLVLALPSTHPLADS 178 Query: 185 RS--IKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGV-VCETFSACISLVAKSD 239 ++ + + +P + Y +++ + TP+V + LVA Sbjct: 179 PEVDLRAVAGEPFILPPRYDMPGLYTSVTQACERAGFTPRVVQPDVWLMQTIVGLVAGGM 238 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQ 292 ++ +P + P G V P++++ A + RR+ TP+ S + Sbjct: 239 GIAVVPSSVQQIPRAGATFV--PLTDVSATARMAMAWRRE-IGTPVLRSFLDI 288 >UniRef50_A0KPQ5 Transcriptional regulator n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KPQ5_AERHH Length = 307 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 75/297 (25%), Positives = 125/297 (42%), Gaps = 4/297 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 QIR FV VA S+ A+ L++SQ A++ +I+ELE L A LF R +GV+LT Sbjct: 1 MNFTFRQIRYFVAVADSFSVSRAAAELHISQSAVTSAIRELETELGAALFERNPRGVSLT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 G F HA IL + A + ++ Q G++ IG+ ++ + + RF + P Sbjct: 61 TQGHQFLLHARRILGAMTEAGQSLKAVAQQDQGRLTIGVTTLVAGYYLSEALGRFRRAFP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 V++ + E + + +++ GE+D I + F E L ++ HP Sbjct: 121 AVQIEVKEDEQPYLEHQIVNGEVDVGILMTNRTIRQEAFDTELLTRSPLRVWLAANHPLC 180 Query: 183 G--ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 S+K L + T + + L P++ + + A SLVA Sbjct: 181 AESTLSLKALGEEPMISLTAD-QLDQIIGGGLRRYGIAPRIVLRTASVEAVRSLVASQLG 239 Query: 241 LSKLPEEMGCD-PLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 L+ LP+ L + + + E +P L+ RR SR I R + Sbjct: 240 LALLPDFAYRPWSLEQERVEARAIKEPIPAIDIGLVWRRGSRLEWTAREFIDIVRDQ 296 >UniRef50_A4ISN4 Transcriptional regulator LysR family n=6 Tax=Geobacillus RepID=A4ISN4_GEOTN Length = 305 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 67/298 (22%), Positives = 130/298 (43%), Gaps = 9/298 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + Q++ FV +A +G I A++ L+++QP LS+ +++LEE L LF R++K + LT Sbjct: 2 IDVKQLKYFVTIAEEGQITKAAQKLHIAQPPLSQQLKQLEEKLGVPLFDRKAKKMELTAP 61 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ FY+ A +L +L A ++++ + G + +G S S + I +FH+Q P V Sbjct: 62 GKLFYEKAKQLLHQLDDAIAEVKEIETGATGTLAVGCVKS-CFSYLAQTIRQFHEQFPNV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + EG S+ L++ +D I + L ++ P H A+ Sbjct: 121 TFHLREGDTFSICQLLQERHIDIGIVRL--PIDSSHYDIIPLPSDRYVAVL-PEHWALSR 177 Query: 185 RSI--KQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 S+ + ++ + Y+++ E P V C + +SLVA+ Sbjct: 178 SSLSMRDFAEWPLLLLHRVHGAGQYERVVEECRRHGFEPNVLCECPDATILLSLVAQGMG 237 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 + +P+ G+ +LP+ + KA +I R + ++ Sbjct: 238 ATIVPQSTV-SLFRLPGIRVLPIVDSSMKAEAAVIIDRQRYVPKSVHHFLNLLQQTVA 294 >UniRef50_Q65GU9 Transcriptional regulator YbbE n=2 Tax=Bacillus subtilis group RepID=Q65GU9_BACLD Length = 299 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 66/298 (22%), Positives = 128/298 (42%), Gaps = 11/298 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++++QI F+ V+R A+ +SQPALS+SI++LEE L LF R++K + LT Sbjct: 1 MELYQIDHFIAVSRHKHFTKAALEQRISQPALSRSIKKLEEELGVPLFIRKTKSIRLTKY 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE F A L + IR+ AG+I++ ++ LMP +I+ F +++P V Sbjct: 61 GEQFLIKAKQARLALDEGVQQIRESVNPNAGEISVSFLHTLGSRLMPQLIAEFKKKYPNV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 R+ + + + + GE D +++ + + L + + HP Sbjct: 121 AFRLYQAANEHLQHMVETGEADICLSS--PPLPNEHLEWTVLDTEPLYLVLPADHPLADR 178 Query: 185 RS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + I+ + + P ++ + +P++ E S + LV+ ++ Sbjct: 179 KEVAIRSIAHEDFVCFKPGYGLRYVFDQMCRGLSISPKLAFEGEEVSTILGLVSAGLGVA 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASL----ITQFRRE 296 LP+ + +H + VS+ + L +D +P + I +RR Sbjct: 239 ILPK--TAEHVHSP-VAFCRVSDYRSERTIGLAVLKDHYLSPAARNFKEFVIEYYRRN 293 >UniRef50_D0IX04 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0IX04_COMTE Length = 309 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 86/289 (29%), Positives = 133/289 (46%), Gaps = 1/289 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + Q+R F+ V G R ASR L++SQ ++ S++ LE L QL R +GV LT Sbjct: 1 MTLQQLRVFLAVVEFGGFRAASRQLDISQAGITTSLKALEATLGVQLLRRSVQGVALTAE 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE A LI E A+ED RQ G + IG+G + + L+ V+ FH++ P V Sbjct: 61 GERLLPRAKLITREAYKAEEDARQALTAEGGSLAIGLGPTPTAVLLHLVVPEFHRRFPSV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++R+ G ++ EL+Q + + F +L + R GHP GA Sbjct: 121 QLRLFSGFYEQLLPELQQSRIQLAVTAVPDTGVAAGFEVRRLFRSALVVIARRGHPLAGA 180 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAKSDFLSK 243 +K L W + P G + +Q + P+V CE+FS L+ +D+L+ Sbjct: 181 CRLKALQGQEWVLLGPPGGPGGTVLRFHTEQGLSMPRVAATCESFSHLTPLLRGTDWLAM 240 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQ 292 +P M + L G +V LP+ E P LI R DS + + Sbjct: 241 VPIAMMDNNLLGNDVVALPIEEPPPTFDNCLIYRSDSLLSTSADTFAGM 289 >UniRef50_A4BGZ4 Transcriptional regulator, LysR family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BGZ4_9GAMM Length = 315 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 73/295 (24%), Positives = 144/295 (48%), Gaps = 1/295 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K+ + FV GSI GA++ + SQP++SK ++ LEE L L R ++G+ +T+ Sbjct: 17 MKLDLLETFVVTINTGSIHGAAKEMGQSQPSISKKLKLLEESLGVPLLIRGTQGIEITNY 76 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++F A IL E R A+ ++ + +G+ + + + + + +LMP I + QQHP + Sbjct: 77 GKTFLIRAQAILNEARRAEAEMMELRGEKESTVRMIVAPTSTINLMPKTIQVYRQQHPHI 136 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 K+ I EG +++LR+ +DF + ++ +EF E++ A+ R G G Sbjct: 137 KLEIYEGLQAMAVDQLRRAHVDFAVCPLWEELPANEFMVEEIENMPMAVVTRKGSRFAGV 196 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQ-TPQVGVVCETFSACISLVAKSDFLSK 243 + L D +W + + ++ D P+ + + + +S +++ D ++ Sbjct: 197 TKFRDLHDANWIHIGAGENLSPLVLKIFSDLGLDAPKPMMESYSLTTTLSFLSEYDSIAL 256 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 +PE++ P++ L L + + Y+I+RR++ TP S R Sbjct: 257 VPEKLVNHPVYSGWLTKLNLENDVDHYPLYIIRRRETPLTPSAESFCHTLARVAA 311 >UniRef50_Q2J7C4 Transcriptional regulator, LysR family n=22 Tax=Actinomycetales RepID=Q2J7C4_FRASC Length = 316 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 62/288 (21%), Positives = 117/288 (40%), Gaps = 7/288 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++HQ+ FV VA A++ ++++QP+LS+ I+ LE+ L LF R ++LT A Sbjct: 1 MQLHQLAYFVAVAETRHFTRAAQRVHVAQPSLSQQIRALEQELGTPLFNRARGNISLTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+ A IL + A++ + + G + +G S+ +P V+ FHQ++P + Sbjct: 61 GETLLPLARRILTDTETARQRVTELLDLRHGTVRLGATPSLCTGFLPDVLRLFHQRYPGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI-- 182 ++ + EG ++ +L G LD + D L+ + + P I Sbjct: 121 RLLVEEGGSRDLVRDLAAGSLDLALIILPLQSSDPALATSPLIRESLVLVSSLDEPPIVA 180 Query: 183 -GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 ++ L ++ M + + P + A + VA Sbjct: 181 GRPLTVADLRNHPMVMFRRGYDLREATVTACREAGFEPIFAIEGGEMDAVLGFVAAGLGS 240 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASL 289 + +P + H G+ + P + L +RRD T L Sbjct: 241 AVIPSTVA----HRLGMRVTPFVLPGLQRTIGLARRRDVEPTRAAVEL 284 >UniRef50_Q1IRM1 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRM1_ACIBL Length = 302 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 61/292 (20%), Positives = 114/292 (39%), Gaps = 5/292 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + Q+ F+EVA+ G+ A + SQ A+S I++LE+ +LF R K V L+ A Sbjct: 1 MDFDQLLTFLEVAKLGNFSRAGEKVYRSQSAVSAQIRQLEQEYGERLFDRSGKIVRLSPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE ++A ++ + + + G ++IG + ++P + + + QQ PQV Sbjct: 61 GEVLLEYAQRMVALRNESLRAVADQGETPRGVLSIGANEATCLYVLPDIFTEYCQQFPQV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + ++ + G +D I T + + + HP Sbjct: 121 QITVYRNFSRKILQAVEDGVIDLGIATL--PVKSPSLKVHPIFRDRLELMVPVRHPLAAK 178 Query: 185 RS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 S I+++ +Y P G +QL +L +V + + S V ++ Sbjct: 179 ESVTIEEIAEYPQIFP-KTGYTRQQLDKLFRPYNSKLRVAMEIPSVGLIKSFVVSGVGVT 237 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 L D + MLP++ + LI R D + I R Sbjct: 238 LLSSTFAQDEVRAGKAKMLPIAGVDMWRELGLIYRNDRTLPRSATAFIDLMR 289 >UniRef50_C3X7G6 Transcriptional regulator n=2 Tax=Oxalobacter formigenes RepID=C3X7G6_OXAFO Length = 291 Score = 233 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 65/294 (22%), Positives = 129/294 (43%), Gaps = 8/294 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I Q+R F +A +G I A++ L+++QP LS ++ LEE L +L R ++ ++LT A Sbjct: 1 MDIRQLRYFCAIAEEGQISRAAQRLHIAQPPLSYQLKLLEEELGVKLIDRNTRSLSLTKA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +FYQ A IL ++ A + R + + G + IG +I +P I RFHQ++P V Sbjct: 61 GLAFYQRAEQILGLMKVAAIEARDVEYGVNGVLTIGSPPAIGNIYIPERIKRFHQEYPHV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP-AIG 183 + + EG ++ L ++F I + + LL + + R P IG Sbjct: 121 RFQWREGNTYRILELLNADMIEFGIARL--PVPMGSYESKPLLTESWMAVSRNDDPKWIG 178 Query: 184 ARS--IKQLLDYSWTMPTPHGS--YYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 + +++L + + + + + ++ V + SA +SLV Sbjct: 179 KDNIGLEELEGIPLILMQRQAGIHCHDMVIDEMKNKGVNADVFCESDNISAILSLVEAEL 238 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 ++ LP + ++ +++ ++ ++D + + F Sbjct: 239 GIAILPVSTLSVR-PSGDFHAMAIANCQLQSSSAILWKKDKPLSAAAKLFLEMF 291 >UniRef50_D0D0K4 Transcriptional regulator n=1 Tax=Citreicella sp. SE45 RepID=D0D0K4_9RHOB Length = 300 Score = 233 bits (596), Expect = 5e-60, Method: Composition-based stats. Identities = 76/291 (26%), Positives = 136/291 (46%), Gaps = 4/291 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + Q+R F+ VA G++ GA++ L +SQ A++++I+ELE L QLF R +G+ +T Sbjct: 1 MAFTLRQLRYFLAVAESGTVSGAAQALAISQSAVTEAIRELEADLGVQLFERHPRGLDIT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 G F +HA+ IL + A+ + + +L G++++G+ + ++ ++ ++SRF + +P Sbjct: 61 QKGHQFLRHATGILGSVSDARLSLSKDPDRLRGKLHVGVTSLVAGYVLSDILSRFRRANP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 V+V +E + + L GELD + E + + ++ GH Sbjct: 121 GVEVTALEDSGEYLEHLLIGGELDAAVMVTTNMRDRMALQTEIIDTSPYQLWLPNGHELS 180 Query: 183 GAR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 SI+ L+D M + LL P+V + A SLVA Sbjct: 181 TRTSVSIEDLVDEPIIMLRVD-EIEEATRRLLSAFGARPRVAFRTRSVEAVRSLVATGAG 239 Query: 241 LSKLPEEMGCD-PLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLI 290 ++ LPE + L G +V VS LP ++ R+ + +P T I Sbjct: 240 IAILPELVYRRWSLEGDRIVSRDVSGSLPVVQVGVVWRKGAPLSPATREFI 290 >UniRef50_Q5WCI6 LysR family transcriptional activator of glutamate synthase n=6 Tax=Bacillales RepID=Q5WCI6_BACSK Length = 301 Score = 233 bits (596), Expect = 5e-60, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 123/294 (41%), Gaps = 5/294 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++I Q+ F+EVA++ + A+ L+++Q A+S+ I LE L LF R + V LT Sbjct: 1 MEIRQLLYFMEVAKREHVTEAAAALHVAQSAVSRQIFNLESELGVDLFIREGRRVKLTPI 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F + + + A+ ++++ G I + S++ +P I F +Q+P+ Sbjct: 61 GKIFLERIKHAMNVIDDAKREVQEYLDPKKGTIRVAFPISLAAYTLPTAIYAFRKQYPEA 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 K ++ +G +I+ + +G+ + + + + T L ++ HP + Sbjct: 121 KFQLKQGLYRELIDGVIKGDYNMALIG-PVPMEEKKITPRILFAERIVALLPIHHPLAKS 179 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 I L + + + + + + PQ+ + A LV+ ++ Sbjct: 180 AEINLLDLKNDPFVLLPEGFVFRDLVINACSEIGFVPQIAFEGDDIDALKGLVSAGLGVT 239 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 +PE D V +P+SE +I + P T L +F +E Sbjct: 240 LMPEVTLVDNTPRST-VKIPLSEPNVTRTVGVITPTERGLLP-TEELFYEFLQE 291 >UniRef50_B4WMZ4 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WMZ4_9SYNE Length = 289 Score = 233 bits (596), Expect = 5e-60, Method: Composition-based stats. Identities = 72/279 (25%), Positives = 118/279 (42%), Gaps = 8/279 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + Q+ F+ VA + A++ LNM+QP LS I++LE L QLF R + V+LT A Sbjct: 1 MNLRQLNYFLAVANELHFGQAAKRLNMAQPPLSMQIKQLESDLDVQLFERTQRKVSLTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE + A ILE + A+ +Q GQ+ I +S S++P IS F Q +PQV Sbjct: 61 GEVLKKEAEQILERIEVARRKTQQADRGETGQMAIAFVSSAMYSILPPWISAFRQSYPQV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI-- 182 + E + I+ L ++D I D + + + + + GH Sbjct: 121 ALTFQEATGLEQISGLLSHQID--IGFVRPPIEDVSISDKVVWREPLVVALPEGHRLSTH 178 Query: 183 GARSIKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 A SI L + + Y ++ + +P + + + LVA + Sbjct: 179 KAISISSLEQEPFILIQRPLASEMYDKIISFCQQASFSPNITQTAQQLQTILGLVAANLG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRD 279 ++ LP L G+ P E P +I R+D Sbjct: 239 IAILP--TAAQKLQRAGICYRPFIETTPAVELVMIWRKD 275 >UniRef50_A8GER4 Transcriptional regulator, LysR family n=2 Tax=Serratia RepID=A8GER4_SERP5 Length = 328 Score = 233 bits (596), Expect = 6e-60, Method: Composition-based stats. Identities = 76/301 (25%), Positives = 139/301 (46%), Gaps = 2/301 (0%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++++ I FV VA++ S+ A+ LN+SQPALSK++ ELE +L R +G LT+ Sbjct: 27 RMRLRHINGFVAVAQERSLSRAADKLNLSQPALSKTLSELEALTGNRLLVRNRQGTLLTE 86 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 GE F +A+ +LE L AA + + A + IG + + ++P I ++ Q HP Sbjct: 87 QGEQFLGYATRVLEALTAAGHALDRLDDAPARVLRIGALPTTALGMLPQSIGQYQQAHPH 146 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 +++++ G+ ++ +L+ GE+D I FE LL + + RPGHP + Sbjct: 147 SRIQVITGKNAELLAQLKAGEIDVAIGRMADPEMMSGLAFELLLLESLLMVTRPGHPLLS 206 Query: 184 AR-SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAKSDFL 241 ++++ L Y + LL Q + P + + S + + D+L Sbjct: 207 ETITLERALHYPAIISPKGTVPRHNTESLLSTQGFSLPGQYIETLSASLARQMTLQFDYL 266 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQ 301 +P + L+ LP+ + A ++ R D + + I+ R G ++ Sbjct: 267 WFVPSSAVKADIAAGQLIPLPLPTQGMEEAVGILTRNDGELSEAVLAFISTVRGIAGAVR 326 Query: 302 S 302 S Sbjct: 327 S 327 >UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZY7_9GAMM Length = 318 Score = 233 bits (595), Expect = 6e-60, Method: Composition-based stats. Identities = 55/301 (18%), Positives = 125/301 (41%), Gaps = 5/301 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 V + Q+RAFV +A+ S AS +L++SQPALS +I+ +E+ LF R ++ + L+ Sbjct: 21 MNVSLRQLRAFVTLAQSQSFAEASELLHLSQPALSVAIKNMEQETGGSLFSRSTRSLQLS 80 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 G F A +L + A +D+ + G+I + + S + + P ++ F +++P Sbjct: 81 PEGRQFLPVARRLLADWDQAFDDLGRAFNLQQGKIRVAVMPSFAMNQFPEALAPFQREYP 140 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 + + + + + S+I+ +R+G+++ I ++ F L ++ P P Sbjct: 141 DINISVEDVVMESVIDAVREGQVELGIT--FEPDQMDGLEFTPLFTDRWIALVHPKSPLA 198 Query: 183 GAR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + S L++ + + L + TP + + +V+ Sbjct: 199 ARKKLSWTALMEEPFIAMNRGSWSRNTTEKALSEAGVTPTRLLEANQLATIGRMVSVGLG 258 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 + +P ++ + G++ + + + R+ + +LI + Sbjct: 259 TAVVP-QLCRQQMESLGILCKTIGRPSIERQVGIFTRKRRSLSGAAQALIAHLLEHFSKV 317 Query: 301 Q 301 Sbjct: 318 S 318 >UniRef50_Q5X4A2 Hydrogen peroxide-inducible genes activator n=4 Tax=Legionella pneumophila RepID=Q5X4A2_LEGPA Length = 296 Score = 233 bits (595), Expect = 6e-60, Method: Composition-based stats. Identities = 73/292 (25%), Positives = 121/292 (41%), Gaps = 9/292 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + + FV +A A++ +SQP LS I++LEE L LF R +K V LTD Sbjct: 1 MNLRDLHYFVILADVKHFGEAAKRCFVSQPTLSMQIKKLEEELGVVLFERTNKQVLLTDQ 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G IL + +E RQ + G++ +G+ ++S ++P V+ ++P++ Sbjct: 61 GSKLLDRTRKILILIDEMKELARQSEDPFTGELRLGVIPTVSPYMLPLVMPELKNEYPRL 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 KV ++E + +I +L QGELD I P D F+ + L E++F C HP A Sbjct: 121 KVWLIEDKTHRLITKLEQGELDVAIMAL---PIDKRFSCQILYEEKFYFACANTHPLAQA 177 Query: 185 RS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 +S I L + + +Q + + +V ++ Sbjct: 178 KSVNINDLKNQPIMLLEEGHCLREQAMAVCQLAKADDIADFTATSLETLRLMVQAGMGVT 237 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTP---LTASLIT 291 LP + L +P SE P L R + + A LIT Sbjct: 238 LLPA-LSTLTASTNHLKCIPFSEPAPSRILGLFWRAGTPRQVCFNAVAELIT 288 >UniRef50_C8WSN1 Transcriptional regulator, LysR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSN1_ALIAD Length = 290 Score = 233 bits (595), Expect = 6e-60, Method: Composition-based stats. Identities = 77/296 (26%), Positives = 131/296 (44%), Gaps = 9/296 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+ F+ VA S R A+ + +SQPALS++IQ+LE L A LF R ++GV LT Sbjct: 1 MELVQLEYFLAVAEYQSFRRAADAIRVSQPALSRAIQKLEGDLGAPLFVRTAQGVRLTPC 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+F HA L E+ A + + GQ G +++G+ S+ +P VI F + HP V Sbjct: 61 GEAFLPHARQALAEVAAGARKVAELAGQARGVLHVGLIYSLGTRFLPDVIRTFTRTHPGV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 VR+ E ++ +L GE+D T P+ T ++L+++ HP Sbjct: 121 TVRLSEAPTQKLLQQLDAGEIDIAFCTPQHAPH---LTLVEILQEELVAIVPLDHPLAAK 177 Query: 185 RS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + L + + + TP+V + LVA ++ Sbjct: 178 DQCHLSDLAGEPFVAYARESGIRHVIERYCAEAGFTPRVAMEGVEDLTVAGLVAAGVGVA 237 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 +P D L + +L + E K + Y+ + +P+ + I +R C Sbjct: 238 VVPLHAQLDQLP---VHVLRLCEPC-KRSVYMAWHTHTTLSPVARAFIAFVKRMCA 289 >UniRef50_UPI0001744D79 transcriptional regulator, LysR family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744D79 Length = 300 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 68/293 (23%), Positives = 132/293 (45%), Gaps = 6/293 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ + F EV RQ S A ++L ++QP +SK++Q+LE LF R+ K LT A Sbjct: 1 MESRALAVFAEVVRQKSFSAAGKILGLTQPTISKAVQQLEHDCGCLLFDRQGKKFRLTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE YQ A +IL+E ++++ G G++ +G+ + S L ++ F +QHP + Sbjct: 61 GEVVYQRAQVILKEHERLRDELAGIHGLERGRLRLGLPSLGSSLLFAPHVASFRRQHPGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + E + + +R GE++ ++ GP EF ++ + ++ GHP Sbjct: 121 EIELHEQGSLHLQERVRAGEIEVGVSL---GPVPEEFDWQPVSDEPLVALLPAGHPLERE 177 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 S++ L D + + P S + + + +P I+LVA ++ Sbjct: 178 TSLELADLKDTPFVLFEPGFSLNAVILDACRQRGFSPVEAARSGHVDFIIALVAAGLGVA 237 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 LP + + + ++P+ + + LI RR +P + + Sbjct: 238 LLPRLIV-NSREQRVCTVVPLRDEDLRWRLGLIWRRGGDLSPAARRWLEVVQE 289 >UniRef50_Q11H84 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11H84_MESSB Length = 314 Score = 232 bits (594), Expect = 7e-60, Method: Composition-based stats. Identities = 75/299 (25%), Positives = 135/299 (45%), Gaps = 8/299 (2%) Query: 5 VKIH-----QIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGV 59 + + Q+ + V R GSI A++ LN +QP L++SI+ LE+ L L R + GV Sbjct: 1 MNLRSIPVAQLLELLAVVRCGSINRAAQELNTTQPTLTRSIKRLEDRLRVPLLQRTAHGV 60 Query: 60 TLTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQ 119 T ++ ++ I + R A +I G AG+I IG A ++ ++P V++RF Sbjct: 61 TPSEYTKAMLPFLQSIESDFRKALAEIEAATGAGAGKICIGSTAMVANKIVPQVLARFVP 120 Query: 120 QHPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGH 179 + P + + +E + +++ LR G+ DF + + ++L + RPGH Sbjct: 121 RWPHLTIEFVEDRKPALLEGLRSGKYDFVMALMSPEEQARDILQQELFTDTLVVIARPGH 180 Query: 180 PA--IGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLVA 236 P + + S++ ++ W +PT +L ++ P V F+A ++LV Sbjct: 181 PLTKLSSLSVRDIVQCKWILPTEGLDLRSRLENFFRNEGHDVPAFPVETTLFTAIVALVK 240 Query: 237 KSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 +D +S +P + D L LV L ++ RR +P L + RR Sbjct: 241 STDRISAIPSVVVRDELLSGELVALRGPWNFIHRSFSAYFRRGHTLSPSARELFRETRR 299 >UniRef50_B8IVL1 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=B8IVL1_METNO Length = 318 Score = 232 bits (594), Expect = 7e-60, Method: Composition-based stats. Identities = 72/300 (24%), Positives = 120/300 (40%), Gaps = 3/300 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + + F +A G + A+ L +QPAL+K IQ LE + A+LF R S+G+ LT Sbjct: 1 MDLRDLAYFEVIADLGHLGRAAERLGRTQPALTKCIQRLEASVGAELFARSSRGLALTQV 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE A + + A ++ AG + IG GA+++ L+P V P V Sbjct: 61 GEVLLARARRMRTAMDEALREVSDFAAGAAGHVRIGTGATMAEYLLPQVCRALIAAAPAV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 V + G + LR +LD I +D EF + GHP G Sbjct: 121 TVELQIGMSGVLRTALRDNQLDLIIGPVLASDHD-EFAHVTFGTDDVVVVAARGHPLCGR 179 Query: 185 R-SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAKSDFLS 242 SI+ L+ + W +P + + L + P V + + + L+ ++D LS Sbjct: 180 PLSIEDLVKWKWVLPAKSVAMRQWLDTVFQAHGLPGPAVQIETNSITMLPRLIGETDLLS 239 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQS 302 G L L + + + RR+ +P ++T + + L S Sbjct: 240 FTSTRNLLPDRLGGRLERLGLDATTMRRPLGCVYRREGYLSPAALRVVTLLQTQGSMLLS 299 >UniRef50_B5XVV4 Transcriptional regulator cynR n=5 Tax=Enterobacteriaceae RepID=B5XVV4_KLEP3 Length = 313 Score = 232 bits (594), Expect = 7e-60, Method: Composition-based stats. Identities = 64/299 (21%), Positives = 127/299 (42%), Gaps = 7/299 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + + F+ VA A+ L++SQPALS+ I++LE L QLF R + LTDA Sbjct: 1 MLLRHLSYFIAVAEHRGFTRAAAALHVSQPALSQQIRQLEAMLEVQLFDRSGRYTRLTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE + ++A +L +L + + + G++ I M + + ++ ++ +++++P V Sbjct: 61 GEIWLEYARRVLRDLEEGRRALHDAEDLQRGKLRIAMTPTFTTYVLGPLVEAYYRRYPGV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 K+ I E M L + ELD I + + + LL + A+ HP Sbjct: 121 KLLIQEMNQERMETMLLEDELDVGIA--FDESLSRDIVVQPLLTETLALVVSRAHPLAHE 178 Query: 185 --RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++ L + + + +Q+ P V + + A ++++ + + Sbjct: 179 SHLQLQALDAQPLILLSSEFATREQIDRYCRRHRLEPDVRMEANSIGAVLTVIRGTLLAT 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQ 301 LP + LV + + L + L+QR+ + Q+ I R L+ Sbjct: 239 LLPAAIAGQY---DDLVAIELKPALLQRTACLLQRQGAWQSAAAREFIALAREIAATLE 294 >UniRef50_A9AQ38 LysR family transcriptional regulator n=7 Tax=Proteobacteria RepID=A9AQ38_BURM1 Length = 317 Score = 232 bits (594), Expect = 7e-60, Method: Composition-based stats. Identities = 78/291 (26%), Positives = 143/291 (49%), Gaps = 2/291 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K+HQ++A V A GSIRGA+R L +SQ A++++++ELE L R +G+ T+ Sbjct: 1 MKLHQLQALVASAEAGSIRGAARTLGLSQAAVTRALRELEAAERLPLLVRAPEGIGFTEY 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++ HA L+L++L A +D+ + +G++ G+++IG+ ++ + + + RF ++ P V Sbjct: 61 GKALLTHAKLVLKQLEQAHDDLARMRGRVDGRLSIGVTPWLTLTFLAETVLRFRERMPDV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + E + LR G +DF + + G EF FE +L A+ R GHP A Sbjct: 121 RLELYEALMAVAQPLLRDGSMDFALGHIHPGSGAQEFAFEPMLRYDTAVMVRAGHPRERA 180 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTP--QVGVVCETFSACISLVAKSDFLS 242 RSI LLD W + + + L + V ++ S +++ ++D + Sbjct: 181 RSIHDLLDDDWVLNSTADGQTALVDYLFTRHGARIDERRIVRAQSVSMLQTMLEQADMCT 240 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 P + P G+ + L + E ++ RR S + I Sbjct: 241 WCPTILAAVPSFGERMRALSLKETFEPRELGVVTRRSSTLSEAARCFIDCL 291 >UniRef50_Q2T4S2 Transcriptional regulator, LysR family, putative n=41 Tax=Proteobacteria RepID=Q2T4S2_BURTA Length = 331 Score = 232 bits (594), Expect = 8e-60, Method: Composition-based stats. Identities = 69/300 (23%), Positives = 125/300 (41%), Gaps = 3/300 (1%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++K Q+ V +A +G+I A+ LNM+QPA SK ++ELE+ + A LF R +G+ T Sbjct: 27 RLKTRQLLLIVALADEGNIHRAAAALNMTQPAASKLLRELEDTIGAMLFERMPRGMRPTL 86 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 G++ +HA L L AQ+++ + GQ+ IG S L+P ++ H Sbjct: 87 YGDALIRHARAALGSLDQAQDELAALKAGRLGQVAIGAITSPGLRLLPPAVAAVKATHAN 146 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V++ + ++ L Q +LD + +E L + A R GHP + Sbjct: 147 VRISVEIDTSNVLLERLAQDKLDVVVGRLSAEHDKLRLRYEPLTGEPVAAVVRAGHPLLE 206 Query: 184 AR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQ-VGVVCETFSACISLVAKSDF 240 ++ + +W +P + + + TP V ++ +SD Sbjct: 207 RAPLALADVQRAAWVVPPAGSVLRHRFELMFQRASLTPPANVVETAALLFVTRVLERSDM 266 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 ++ L E++ + MLP+ + +I R D P + I R + Sbjct: 267 VAVLAEDVARYYATHGIVAMLPLEMDCRMDDFGIITRTDKVHAPAASVTIEAIRDAAREI 326 >UniRef50_P0A4T6 HTH-type transcriptional regulator pcaQ n=10 Tax=Alphaproteobacteria RepID=PCAQ_AGRT5 Length = 311 Score = 232 bits (594), Expect = 8e-60, Method: Composition-based stats. Identities = 76/300 (25%), Positives = 137/300 (45%), Gaps = 3/300 (1%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++K ++ FVEVARQ S+ A+ +L++SQPA++K+I+ELE+ L L R +G+ ++ Sbjct: 5 RIKFRHLQTFVEVARQKSVIRAAEILHVSQPAVTKTIRELEDVLGVSLLEREGRGIRISR 64 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 GE F +HA + LR A + + Q + + +G ++S +MP +S F + Sbjct: 65 YGEVFLRHAGATMTALRQAVDSVSQEAARAGPPVRVGALPTVSVRIMPKAMSGFLAEKTG 124 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI- 182 V+I+ G+ ++ +LR G+LD + F+FE L ++ R GHP + Sbjct: 125 SPVKIVTGENAVLLEQLRVGDLDLVVGRLAAPQKMAGFSFEHLYSEKVRFVVRAGHPLLS 184 Query: 183 -GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLVAKSDF 240 G L +Y MPT + + L + + + + + + SD Sbjct: 185 PGLSVFDHLHEYPVLMPTRQSVIGPVVEQFLIANGVPALPIRIETVSDAFGRAFLRTSDA 244 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 + + E + + L +LPV L R D++ + + L+ R G L Sbjct: 245 IWIISEGVVAADVADGILAILPVETGDTSGPVGLTVRADTQPSLPLSLLMQAIREAAGEL 304 >UniRef50_B2UBD9 Transcriptional regulator, LysR family n=8 Tax=Betaproteobacteria RepID=B2UBD9_RALPJ Length = 314 Score = 232 bits (594), Expect = 8e-60, Method: Composition-based stats. Identities = 79/302 (26%), Positives = 135/302 (44%), Gaps = 5/302 (1%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 + +++ + FV +A++ ++R A+ L++SQPA+SK++ ELE QL R +G Sbjct: 9 LPSRIRFRHLSCFVAIAQERNLRRAAERLHLSQPAVSKTLGELEALAGVQLVERGRQGAR 68 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT AGE F +HA + + L +A + A +++G +++ SL+P I+ H Q Sbjct: 69 LTAAGEQFLRHAVGVTQALESAAAALMGSTDASAPVVHVGALPTVASSLLPRAIAHLHAQ 128 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P VR+ G V ++ L+ GELDF + + +FE L + A+ RPGHP Sbjct: 129 RPHAGVRLRTGTNVELLTALKAGELDFIVGRMAEPDRMQGLSFELLYAEPLALVVRPGHP 188 Query: 181 AI----GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLV 235 + + S++ +LDY + TP L P + S L Sbjct: 189 LLSQPGASASLQAVLDYPLVIATPGTVPRHHTEALFQTHGLRLPAGVTETLSVSVARLLA 248 Query: 236 AKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 +SD + PE D L L L ++ K L++R + L ++ + Sbjct: 249 CRSDAVWITPERAAGDDLAHGQLARLDIATSGTKEPVGLLRRSAVTPSELASAFMELLTE 308 Query: 296 EC 297 Sbjct: 309 LA 310 >UniRef50_A9WIA6 LysR substrate-binding n=4 Tax=Chloroflexaceae RepID=A9WIA6_CHLAA Length = 307 Score = 232 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 65/286 (22%), Positives = 121/286 (42%), Gaps = 3/286 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + +H +R +V V QGS A+ +L MSQ A+S+++QELE L L RR++GV T A Sbjct: 17 LNLHLLRIYVAVLEQGSFTKAAEVLTMSQSAVSRAVQELERQLGTTLLERRARGVAPTMA 76 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +HA I R A E + + +G G++ IG ++I L+P ++ +H+++P + Sbjct: 77 GTILGEHARRIFTHERLAIEALNELRGLQRGRLAIGASSTIGIYLLPPLLGNYHRRYPGI 136 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + G +I L ++D + + + + P HP Sbjct: 137 ELFLDIGNTQQIIERLLSYQIDVAYV-EGPVAANEDLQVVPWRSDEMVVIASPDHPLTRR 195 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++ L D + M P K + + L T + + + A V+ LS Sbjct: 196 VTLDCSDLQDAPFIMREPGSGTRKVMEQALAAHNVTVRPVMELGSTEAVKQAVSAGLGLS 255 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTAS 288 + L L +L + + + ++ D Q+ + Sbjct: 256 MVSRFTIQSELIAGKLRVLNIPGLNIQRQLSRVRLHDRPQSLALEA 301 >UniRef50_Q1ATU8 Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ATU8_RUBXD Length = 301 Score = 232 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 67/290 (23%), Positives = 123/290 (42%), Gaps = 7/290 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R FV VA + A+R L++ QP LS IQ LE L AQLF R + V LT+A Sbjct: 1 MELRHLRYFVAVAEELHFGRAARRLHIVQPTLSAQIQRLEAELGAQLFHRTKRSVRLTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++F A L LE A + R+ G++++G S + S++ V+ + +++P V Sbjct: 61 GKAFLVEARLALEHSERAVREARRMAASETGRLDVGFVPSATYSVLTDVVGLYRRRYPGV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + E + L +G ++ E + +Q GH Sbjct: 121 DLVPREMHSSVQVEALLEGSIEVGFLRLPSDHESDELEVRPFVREQLVAVLPRGHRLASL 180 Query: 185 RS--IKQLLDYSWTMPTPHG--SYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 R ++ L S+ +P Y++QL E+ P+V ++L A + Sbjct: 181 RRVPLEALAGESFLIPRREREPGYHEQLLEVCGTAGFVPKVAQETTELQVGMALTATGGY 240 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLI 290 + P + G+V ++E +P+ + + +P T + + Sbjct: 241 VGLFPAS--TRHVKMTGVVFKRLAEPVPEMELSVAW-QSGELSPATRAFL 287 >UniRef50_P77171 Uncharacterized HTH-type transcriptional regulator ydcI n=96 Tax=Enterobacteriaceae RepID=YDCI_ECOLI Length = 307 Score = 232 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 72/297 (24%), Positives = 138/297 (46%), Gaps = 2/297 (0%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 + ++++ + FV VA+QG++ A+ LN+SQPALSK++ ELE+ A+LF R +G L Sbjct: 8 SQRIRLRHLHTFVAVAQQGTLGRAAETLNLSQPALSKTLNELEQLTGARLFERGRQGAQL 67 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T GE F HA +L+ + A + +++G + +G + + ++P+VI +FHQQ Sbjct: 68 TLPGEQFLTHAVRVLDAINTAGRSLHRKEGLNNDVVRVGALPTAALGILPSVIGQFHQQQ 127 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 + +++ ++ L+ GE+D I +E L + + RP HP Sbjct: 128 KETTLQVATMSNPMILAGLKTGEIDIGIGRMSDPELMTGLNYELLFLESLKLVVRPNHPL 187 Query: 182 IGA-RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLVAKSD 239 + ++ ++L++ + + + L+ Q + P + + S L + D Sbjct: 188 LQENVTLSRVLEWPVVVSPEGTAPRQHSDALVQSQGCKIPSGCIETLSASLSRQLTVEYD 247 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 ++ +P D L LV LPV ++ R D+ + +I R+ Sbjct: 248 YVWFVPSGAVKDDLRHATLVALPVPGHGAGEPIGILTRVDATFSSGCQLMINAIRKS 304 >UniRef50_UPI000178A79D transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A79D Length = 291 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 134/292 (45%), Gaps = 6/292 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ ++ F EVA + S A+ L +Q +++ IQ+LE+ +LF R +G+ LT + Sbjct: 1 MELIYLQTFREVAVRKSFTKAADELGYAQSSVTTQIQKLEKEYGVKLFERYGRGLRLTKS 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE +++A +L+ + ++E + ++ G G ++IG S++ +P+V+ R Q+H + Sbjct: 61 GEELFKYAVQMLDLFQQSKEKLTKQGG---GILSIGTIDSLAAYFLPSVLHRLRQEHEDL 117 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA--I 182 +R+ + S+++++R+GE D + P D + + E+ + P HP + Sbjct: 118 AIRLQTDREDSIVSKVREGEYDLGL-ILENKPEDTSLNWISIREEPLHLIAHPDHPLHRL 176 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++ L DY W M +Y L ++L ++G+ A + +S Sbjct: 177 PVIELEHLADYEWIMTEDTCNYRIMLEKVLRASGAPVRIGLELGNPEAIKRYIMSGTGIS 236 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 LP + + + L +LP + ++ + +I + Sbjct: 237 LLPRMVAEEEIKRGELAILPFQHPDIRLDIQIVVHPKKWLSHSLQDMIEMLK 288 >UniRef50_B1FSS9 Transcriptional regulator, LysR family n=1 Tax=Burkholderia graminis C4D1M RepID=B1FSS9_9BURK Length = 417 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 71/293 (24%), Positives = 135/293 (46%), Gaps = 2/293 (0%) Query: 9 QIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESF 68 Q+R + +AR GS A++ L +SQPA+ ++ +++E+ + L+ RR V+ AG F Sbjct: 116 QVRCHIAIARAGSASEAAQQLGISQPAVHRAARQIEQTVGVSLYRRRVHSVSANAAGLEF 175 Query: 69 YQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRI 128 + SL L E+ A+E+I +GQL+G++ IG+ + L+ VI R +++P V + Sbjct: 176 ARCLSLALYEIAQAREEIAYARGQLSGKVAIGVLPLMPPRLVARVIQRLRERYPSAHVTV 235 Query: 129 MEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARSI- 187 EG +++ +LR G +D + + +L + + R GH +SI Sbjct: 236 DEGSHAALLRDLRMGTIDIIVGGLREPRLTGAVRETELFADPYVVAVRKGHRLARKKSIA 295 Query: 188 -KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSKLPE 246 + + +Y W +P + + + P V V + + ++++ +SD ++ L Sbjct: 296 PRDIANYEWVVPQQNVPRRSVIDSIFARLPIRPPVVVETSSLAMMMAMLVESDCITLLSR 355 Query: 247 EMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 + G +V L + A R D T + + I R+EC Sbjct: 356 SQIREAYPGSEIVALELKTPEADRAVGYTVRADWLGTAVQSGFIEYLRQECSV 408 Score = 78.1 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 35/77 (45%) Query: 6 KIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAG 65 ++ ++ F V G I A+ +QPA+S +I +LE LF R G LT G Sbjct: 15 RLRRLFLFDAVCEAGGIGQAATRAGRTQPAVSLAISKLEASFGGVLFERGFGGCELTAQG 74 Query: 66 ESFYQHASLILEELRAA 82 + +L+++ A Sbjct: 75 AILQRRVRRMLDQMERA 91 >UniRef50_A9B3V4 Transcriptional regulator, LysR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B3V4_HERA2 Length = 298 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 64/287 (22%), Positives = 133/287 (46%), Gaps = 9/287 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+R F VAR G++ A+ +++QP+LSK+++ LE+ L LF R +GV L+DA Sbjct: 1 MELSQLRYFEAVARLGNVTKAAHEQHIAQPSLSKALRALEQELGVHLFDRVGRGVELSDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ +A +L EL+AA+ ++ R G +++G+ ++ L+P ++ F++++ + Sbjct: 61 GKLLLPYARRVLAELQAARHALQSRADLTVGHVSLGVTPTVGTRLIPQALAAFNRRYRGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + E ++ L G +D I + H L+ + + H Sbjct: 121 QLELHEAGASELVELLNAGVVDLAIVS----ALVHGVESTTLMSEPLVVAVGLQHRFAQR 176 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 +SI +L D + + +L + P++ + +SLVA ++ Sbjct: 177 QSIAANELRDEGFILFPQGYELRNYTLQLCEQAGFAPRIVLDGGEMDTVVSLVAAGLGVA 236 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASL 289 +P+ + GL L + + LI+ + +P A+L Sbjct: 237 VVPQLAIDQRM---GLHALMIDAGGLQRTLRLIRHSQRQPSPAAAAL 280 >UniRef50_Q3M2K4 Transcriptional regulator, LysR family n=5 Tax=Cyanobacteria RepID=Q3M2K4_ANAVT Length = 298 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 66/301 (21%), Positives = 131/301 (43%), Gaps = 10/301 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFR-RSKGVTLTD 63 +++ +R F+ VA + A+ L+++QP LS+ IQ+LE L +LF R + V LT+ Sbjct: 1 MELRHLRYFIAVAEELHFSKAAERLHIAQPPLSQQIQQLEAELGVELFQRKTKRQVQLTE 60 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 AG+ F Q A + +L A + ++ GQ+ +G + ++ L+P ++ +F +Q + Sbjct: 61 AGQVFLQEAYQLFAQLSKAIDLTQRTGRGEKGQLRVGFTSLVTYDLLPVILRQFREQFLE 120 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V++ + E L + + + D+ F E + ++ + H Sbjct: 121 VELVLQELTTTQQEQALFDRRIH--VGFAHPPLEDNTFNQECIHQEGLIVAMLVTHFLAR 178 Query: 184 AR--SIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 S+++L D ++ M Y Q+ L +P+V + I LV+ Sbjct: 179 QENISVRELKDENFIMFPRYLGPGLYDQILSLCQQGNFSPKVTIEAIQMQTIIGLVSGGM 238 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 ++ +P + L G+V + E P ++ R++ TP+ + R C Sbjct: 239 GIAIVPSSL--QNLQRAGVVYRTLDEKTPLVETAVVWRQED-MTPVLREFLQIVRSVCVE 295 Query: 300 L 300 L Sbjct: 296 L 296 >UniRef50_Q1GJ71 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GJ71_SILST Length = 312 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 76/301 (25%), Positives = 134/301 (44%), Gaps = 2/301 (0%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 A QVKI ++ +EV GS++GA+ L ++QPA+S++++ELE+ L + L R GV L Sbjct: 7 ARQVKIRHMQCLLEVVSCGSLKGAAERLYLTQPAISRTLKELEDILGSTLLLRSRAGVEL 66 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQ-LAGQINIGMGASISRSLMPAVISRFHQQ 120 T+AGE F A + L L E + + +G L + IG S++ L+P V F + Sbjct: 67 TEAGEVFAHFARMSLAALDHGLESLERTRGGALQQTVTIGALPSVAAGLLPRVAEGFQRL 126 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P + + +G ++I+ LR G + I +F ++ ++ RPGHP Sbjct: 127 APGAVLHLSDGPHGALIDLLRGGAVSMVIGRLGDPASMQGVSFTQVYTEEVVCVVRPGHP 186 Query: 181 AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAKSD 239 + A + L + P + Q+ L + P + + + +D Sbjct: 187 CLAAPELDDLSRWPVIFPPVSAAIRPQVERWLISHGLSEPPNRIETVSGAFARVHARDTD 246 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 + + + + L L+ LP L K L+QR+D+ +PL + + Sbjct: 247 AIWMISHGVVRNELSDGRLIRLPFDTSLTKGPVGLMQRQDADPSPLESLFVKALHEAIEV 306 Query: 300 L 300 L Sbjct: 307 L 307 >UniRef50_B5JLL8 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLL8_9BACT Length = 297 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 68/294 (23%), Positives = 136/294 (46%), Gaps = 7/294 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ +Q++ F+ VAR+ S A++ N+SQP+LS I +LEE L LF R+ KGV L++ Sbjct: 1 MEFNQLKCFLAVAREQSFTRAAKACNLSQPSLSYQIAKLEEELGESLFIRKPKGVELSEP 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ A I EE R R+ +AG++ G+ +I+ L+P ++ F +++PQ+ Sbjct: 61 GKLLLDGAHRIREEQEKIVSTFRTREKLMAGEVRFGIIPTIAPYLLPPLMKAFRREYPQI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPY--DHEFTFEKLLEKQFAIFCRPGHPAI 182 ++ + E + ++ E+ GEL+F + + P + KL E++ + HPA Sbjct: 121 RLIVRESRTSQLVKEVVDGELEFAVVSDIAQPLLKKYSLHLNKLFEEELLLAVPNAHPAC 180 Query: 183 GARSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 ++ + + + + Q +L + +VCE +++V+ Sbjct: 181 ALPELRVQSIDESELILLSEGNCLRDQTMQLCQRGDKL--SSLVCEQLPTQLAMVSGGLG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 ++ +PE M L L K L+++R + + + + + Sbjct: 239 VAIVPE-MAVKNASSAELTFLHFKSPGTKRLIGLLKKRGGKLSLAANEFLKRIK 291 >UniRef50_B8DKN9 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=B8DKN9_DESVM Length = 699 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 70/292 (23%), Positives = 125/292 (42%), Gaps = 4/292 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R F VAR S A+ LN +Q +S I LE L +LF R + V LT+A Sbjct: 1 MELRDLRTFAAVARLLSFHRAAAELNAAQSTVSARIAALETELGVRLFERLGRRVALTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE Q+A+ +++ A+ + + +L G + + + S+ +P VI+ F ++HP+V Sbjct: 61 GERLVQYAAKLIDVEDEARAWVTG-ESRLRGLLTVRVPESLCAYRLPPVIAAFRRRHPEV 119 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + + L + +LRQG D + E L + + P HP Sbjct: 120 ALHLTACTLNGLEKDLRQGITDLAFV-MADSVRGGDLNVEALGVEPLVLVAAPHHPLAAR 178 Query: 185 RSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + + L + + T +Y + E L + P G+ + SA VA ++ Sbjct: 179 DRVVARDLHGITLVLSTTDCAYRTVIEEALAAEGIQPAAGLEFSSASALRGCVASGVGIT 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 LPE D L L L ++ + A +++ R +P + + R Sbjct: 239 LLPEAAVRDELRAGTLRALAWADQPFETAVLMVRHRGKWVSPYMDTFMELCR 290 >UniRef50_A4BGW9 Transcriptional regulator n=1 Tax=Reinekea blandensis MED297 RepID=A4BGW9_9GAMM Length = 409 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 68/303 (22%), Positives = 119/303 (39%), Gaps = 2/303 (0%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 + + Q+R + + S A+R +N+SQPA+ ++ ++LE L LF + S G+ L Sbjct: 103 SENMTHVQLRTLIALQHTTSFSAAAREMNVSQPAVYRAARDLESLLDMSLFEKTSHGIAL 162 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T A ++ ++ L EL A ++ + G I IG L+P I R Sbjct: 163 TKAAKNLTRYVLLAFRELELAFTELAELNGSDITHIAIGSMPLARTILLPRAIDRLSSLK 222 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P V + I++G ++ L GELDF + P + + + I R GHP Sbjct: 223 PDVSISIVDGPYDDLLMRLLNGELDFLVGALRDPPPSTDVEQTAMFDSPLQIAARNGHPL 282 Query: 182 IGARSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 + I+ L +YSW +P L+ ++ + C + S L+ S+ Sbjct: 283 VEQSDIQLSDLAEYSWVLPRTGTPTRTIFENLIGQHLESRGGLIECSSQSLIHQLLHNSN 342 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 L+ L + + L S + R+D T I+ R Sbjct: 343 RLTFLSSHQLEQEIQEGRMKALDFSLPGATRPIGITTRKDWHPTTTQQLFISIIRNLSNE 402 Query: 300 LQS 302 + + Sbjct: 403 MTA 405 Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 48/90 (53%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + ++ F EVAR SI A+ ++Q AL+++I ++E+ L A LF RR G+ LTDA Sbjct: 6 INFRHLKLFSEVARLHSINAAAEQNFVTQSALTQAILKMEKQLGADLFQRRHNGMFLTDA 65 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLA 94 G+ F L L ++ + + + + Sbjct: 66 GDMFLLRTRRCLNFLDTGVKESQNNRNRSS 95 >UniRef50_B1Z3Z1 Transcriptional regulator, LysR family n=16 Tax=Proteobacteria RepID=B1Z3Z1_BURA4 Length = 320 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 74/294 (25%), Positives = 144/294 (48%), Gaps = 2/294 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K+HQ++A V A GSIRGA+R L +SQ A++++++ELE L R +G+ T+ Sbjct: 4 IKLHQLQALVASAEAGSIRGAARTLGLSQAAVTRALRELEASERLPLLVRAPEGIGFTEY 63 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++ HA L+L++L AQ D+ + +G++ G++++G+ ++ + + + RF ++ P V Sbjct: 64 GKTLLTHAKLVLKQLEHAQSDLERMRGRVEGRLSVGVTPWLTMTFLAETVLRFRERMPDV 123 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + E + LR G +DF + G EF FE LL ++ R GHP A Sbjct: 124 RLELYEALMAVAQPLLRDGSMDFALGHVQPGSSAQEFAFEPLLRYDTSVMVRAGHPRERA 183 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTP--QVGVVCETFSACISLVAKSDFLS 242 +S+ LLD W + + + L + V ++ + +++ ++ + Sbjct: 184 KSVHDLLDCDWVLNSSPDGQAALVDYLFTRHGAQIDERRIVRAQSVAMLQTMLEQAGMCT 243 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 P + P G+ + +L + E + ++ RR S + I + Sbjct: 244 WCPTILAAVPPFGERMRVLSLKETFEPSELGIVTRRSSTLSDAARCFIDCLLQT 297 >UniRef50_C1ZI46 Transcriptional regulator, COG0583 n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZI46_PLALI Length = 292 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 66/294 (22%), Positives = 126/294 (42%), Gaps = 7/294 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++HQ+R F++ A S A+ +SQP+LS+ I +LE+ L LF R +GV LT++ Sbjct: 1 MELHQLRYFLKAAELKSFTLAAAECFISQPSLSQQIIKLEQELGQPLFERSGRGVELTES 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ A I+ + A+ +I GQ+ IG +I+ L+P ++SRF + P+V Sbjct: 61 GKLLQSRAGQIVSLVDQARREITD--DGETGQLTIGAIPTIAPYLLPQIVSRFREVVPRV 118 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA--I 182 ++I E + +++ GE D I E L +++ + PGH + Sbjct: 119 TLKIHEDVTEQCLKKVQAGEWDLAIAAL--PVRIEHLEVEPLFDEELWLAVPPGHRLSHL 176 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++++ + + + +++ + P + + LV++ +S Sbjct: 177 TEVPVEEIDRETLLLLGEAHCLTEHVAQYCRRKDMAPLETGRLAQLTTIMELVSRGQGVS 236 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 +P M P+ P+ L+ QT L + RRE Sbjct: 237 FIP-NMCKAFDREGRCAYRPLQGDRPQRTIALVWNSYRFQTLLLKRALDVIRRE 289 >UniRef50_B2JVU4 Transcriptional regulator, LysR family n=43 Tax=Proteobacteria RepID=B2JVU4_BURP8 Length = 322 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 73/304 (24%), Positives = 135/304 (44%), Gaps = 8/304 (2%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M ++ ++AF V GS R A+ +N+SQPALS+ I +LEE L +LF R ++ VT Sbjct: 1 MGINFDLNDLQAFRAVVELGSFRKAAEAVNISQPALSRRIDKLEEALGVRLFERTTRSVT 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT G F A +L++L A IR G + I S++ +P ++ +H++ Sbjct: 61 LTTVGRVFAPSAEQLLDDLDVALLGIRDVSSSRLGHVTIACVPSVAYYFLPGAVASYHRR 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P+++V+I++ ++ + GE DF ++ G + + F+ LL+++F CR HP Sbjct: 121 FPRIRVKILDSSANDVLAAVISGEADFGVSFM--GSQEPDVEFKMLLQERFVAACRRDHP 178 Query: 181 AIGARSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 + + +L ++ + L + L + + + LV Sbjct: 179 LARKKRVTWNELYEHEYVSVDKTSGNRLLLDQALGAVSPRMPSVCETRHVTTMLGLVEAG 238 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASL---ITQFRR 295 ++ +P M + L +P+ E + K +++RR TP I + R Sbjct: 239 LGVAAVP-SMAMPGRNHHILTSVPLVEPVVKRRVGIVRRRGRPLTPAAQEFHKTIVEMRH 297 Query: 296 ECGY 299 Sbjct: 298 GAAA 301 >UniRef50_C8WUA0 Transcriptional regulator, LysR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WUA0_ALIAD Length = 298 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 118/294 (40%), Gaps = 9/294 (3%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 ++ Q+ FV VA + A++ L ++QP LS+ IQ+LE+ + LF R ++ V LT Sbjct: 1 MDTELRQLEYFVAVAEELHFGRAAKRLGLTQPPLSQQIQKLEDEIGVTLFDRTNRRVQLT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 AG + A +L ++ A + R G++++ S + +P VI + ++HP Sbjct: 61 HAGRVLLEEARKVLAHVQTAVKAARDAAAGRVGRLSVAFVGSATYGWLPEVIRAYQERHP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 V++ + E + + L GELD + + + HP Sbjct: 121 DVELVLREMSTPAQMEALTAGELDVGVLRL--PAQHPDLHVRLVERDDCVAVVPSEHPLA 178 Query: 183 GARS--IKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 S + +L + + + + Y L P+V + + LVA Sbjct: 179 TRSSLFLVELAEEPFVLVSRAIWPGLYDGFITLARALGFEPRVRLEVTEVQTAVGLVAAG 238 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQ 292 +S +P + +H + + L + P + RR +PL A+ + Sbjct: 239 LGVSIVPS--ATERVHRRDVRYLHIDGQSPTVELGVAWRR-RDTSPLVAAFLAM 289 >UniRef50_B1ZUQ0 Transcriptional regulator, LysR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUQ0_OPITP Length = 301 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 128/291 (43%), Gaps = 6/291 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++++Q+R V VA G+ A+ N++QP+LS+ I LE+ + +LF R + LT+A Sbjct: 1 MELYQLRYAVAVADTGNFTRAAERCNVTQPSLSQQIINLEKEVGHKLFHRLGRRAVLTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G F + A I+ ++ A +++ +I +G +++ L+ +I ++ P + Sbjct: 61 GAVFIERARQIVYDVENAAKELSDHPSLDR-RITVGAIQTVAPYLLLPMIEVCKRELPNL 119 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ ++E V +++ + +G+LD I T D + E L+ + + HP Sbjct: 120 QINLIEDFRVDLVHGVVEGDLDLAIVTL--PVDDPRVSVEPLMTEPLLLVVGKNHPFATR 177 Query: 185 R--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + SI L D ++ + Q+ P+VG C + +LVA +S Sbjct: 178 KEISINDLADETFVTMGESSTLAAQIRSFFGGHNFQPKVGYRCAQVATLKTLVAMGLAIS 237 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 LP + + + L L ++ P +++ Q+ + Sbjct: 238 ILPR-VDQEEKDRETLTYLRLTGSAPTRELVVVRHLQRYQSRGAQQFLQLL 287 >UniRef50_A9AT28 LysR family transcriptional regulator n=9 Tax=Burkholderia RepID=A9AT28_BURM1 Length = 419 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 72/299 (24%), Positives = 125/299 (41%), Gaps = 3/299 (1%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 A+ + +++ F +AR + A+R L ++QPA+S +I+ LE G LF R +G+ L Sbjct: 105 AYLLNTRRLQLFSTLARHRHMPSAARALGVTQPAVSSAIRILESGAGFALFHRHPRGLLL 164 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T GE+F H L ELR +D+ G + G + +G ++P ++R + Sbjct: 165 TADGETFLLHVRRALNELRHVADDVAALHGSIQGVVTVGALPLGRTLILPEAVARVVTRF 224 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P+V+V E +++ +R G++DF + + E+L+ + + R HP Sbjct: 225 PKVRVITDESAYEALVAGVRAGDIDFILGALRANDAAGDLENERLMSENLVVLARRDHPL 284 Query: 182 IGARS--IKQLLDYSWTMPTPHGSYYKQLSELLDD-QAQTPQVGVVCETFSACISLVAKS 238 R+ ++ L W +P H L + + P V + L+ S Sbjct: 285 ARVRNLGLRSLAAAQWILPRSHAPARGLFDALFRRMKLKPPMPTVESADLAVIRGLLLHS 344 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 D L+ L + L +L V LI R S +P +LI R Sbjct: 345 DMLAVLSAQQLHYECESGLLAVLDVPMHDTTRDIGLITRSGSPPSPAARALIDAIRVVA 403 Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 2/89 (2%) Query: 10 IRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFY 69 + A VA GS+ A+ L +Q A+++++QE+E L LF R+ G+ T G + Sbjct: 12 LYAVQRVADTGSVSRAAAALFRAQSAVTRAVQEVEAALGEPLFDRKPSGMLATPVGRAVL 71 Query: 70 QHASLILEELRAAQE--DIRQRQGQLAGQ 96 + + + EL +RQ + + G+ Sbjct: 72 KRSERVFAELGELANWCALRQSRRRAPGE 100 >UniRef50_UPI0001C3125C transcriptional regulator, LysR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3125C Length = 315 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 69/302 (22%), Positives = 130/302 (43%), Gaps = 8/302 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + ++R EVA GS A+ L ++Q A+S+ + LE + +L R ++ V LT+A Sbjct: 2 IDVRRLRVLREVAVHGSFSAAAHALTLTQSAVSQHVATLEREVGQRLVERGTRPVELTEA 61 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + +HA+ I L A++++ + G+ G++ G + +LMP RF + HP V Sbjct: 62 GYALTRHATGIFARLDDAEQELAEIAGRRHGRLRFGTFPTALATLMPPAFERFGRTHPDV 121 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYD---HEFTFEKLLEKQFAIFCRPGHPA 181 + +++ L ++ L GELD + ++ + + L + F GH Sbjct: 122 TLTVVDDHLQRLVPRLETGELDLALIYDHEALPEISARDLERMPLADDPFQAVLPAGHRL 181 Query: 182 IGARS---IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 R + L W +P+ ++Y+ + TP + + + A +LVA Sbjct: 182 ARRRRPLELSDLSGEPWIGGSPNSAWYRITAHACRLAGFTPHASLASDDYIAVQALVAAG 241 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 +S +P PL G + L + P + RD P A+++ R Sbjct: 242 LGVSLIPGLAVAHPLPGVEVRKL--ASGAPVRRISAARPRDGYHGPPVAAMLESLRAAAA 299 Query: 299 YL 300 + Sbjct: 300 QV 301 >UniRef50_C1PEC2 Transcriptional regulator, LysR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PEC2_BACCO Length = 304 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 59/289 (20%), Positives = 126/289 (43%), Gaps = 4/289 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 ++++ Q+ F+EVA++ + A+ L+++Q A+S+ I LE L LF+R + V LT Sbjct: 2 IRMELRQLIYFIEVAKREHVTHAADELHVAQSAISRQISLLEAELGVSLFWREGRNVRLT 61 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 G+ F +HA ++ E+ A++ + + G + +G +S +++++F ++HP Sbjct: 62 PIGKVFLEHAEKVVLEIDKAKQRMHEFLDPDNGTVRLGFSTGLSVQTFSSLLAQFREKHP 121 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 ++ + ++G +I + GEL+ + + + E L ++ + R HP Sbjct: 122 GLEYQFVQGTPSYLIRLIENGELELALAS-PVPDDHPAVSGEILYMEKLMLLFRRDHPLS 180 Query: 183 GAR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 G + + QL + + S + L P + E LVA Sbjct: 181 GQKMIRLAQLKNERFITFREGFSIREILFAACRKSGFEPAIAFEGEDMETIKGLVASGTG 240 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASL 289 ++ LPE L + +V +S++ ++ + +L Sbjct: 241 VAILPEPALLFNL-SEEIVKAEISDMELMRPVGVMIPKKREMAASEKAL 288 >UniRef50_B3JNA3 Putative uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JNA3_9BACE Length = 295 Score = 230 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 68/297 (22%), Positives = 133/297 (44%), Gaps = 8/297 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q++ F E + + A+R+L++SQ LS+ I++LEE L LF R K + LT+A Sbjct: 1 MELRQLKYFKEACERQNFSEAARILHISQSTLSQQIKQLEEELDVLLFDRIGKRIVLTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++F +A+ + + ++ IR +G G ++IG+ S+S L+ A + F++ +P++ Sbjct: 61 GQAFLPYAARAIYDAEDGKQIIRDLKGIETGVLHIGVTYSMSP-LLIAALQLFNRAYPKI 119 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG- 183 KV I ++ +L LDF ++ + D +F L + R HP G Sbjct: 120 KVEITFATSEELLKQLDGSGLDFVLSFKPEDLTD-DFETIPLFSSRLQFIVRSSHPLAGL 178 Query: 184 -ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + ++K+L + +P + K++ EL VGV + I + + + Sbjct: 179 SSITLKRLSETPLILPERGFATRKKIEELCRKHQLELTVGVEMDDVHTIIHALKSGQWAT 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYY-LIQRRDSRQTPLTASLITQFRRECG 298 L + GLV +P+ + L + S + + + Sbjct: 239 ILTQAAVRGE---AGLVQIPILCNDHLTSRGFLFWPQGSYRKKSALAFADFLLKITA 292 >UniRef50_Q7W9G9 Probable LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W9G9_BORPA Length = 296 Score = 230 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 74/299 (24%), Positives = 126/299 (42%), Gaps = 9/299 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R FV VA A+ L + QP LS IQ+LE + L R+ +GV LT+A Sbjct: 1 MELRHLRYFVAVAEDLHFTRAAARLGIGQPPLSLQIQQLEREIGTPLLLRQPRGVALTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRS-LMPAVISRFHQQHPQ 123 G F Q A +L A E R+ G I +G AS +P+ I + ++P Sbjct: 61 GARFLQDARAVLHAAELAVETARRLGHGEQGDIAVGFTASAVFHPYLPSAIRAYRDRYPG 120 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V++ + E +++ LR GE+D D EF E++L++ + P HP Sbjct: 121 VRIALSESNARALLAGLRSGEVDVAFVR-PPYALDDEFASERVLDEPMLVALPPDHPLCR 179 Query: 184 ARS--IKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 R+ + L + + + Y + + TP+V ++ ISLVA Sbjct: 180 KRTVPVAALAEQDFVLYPRPIGAGLYDAIMQACQRAGFTPRVIQEAPQMASIISLVAAGV 239 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 ++ +P M + G+V P+ P+A + RR ++ + R Sbjct: 240 GIAVVPAAM--RHMGAAGIVYRPIRGDAPRALLDMAYRR-QPRSAAVRHAVELLRGRAH 295 >UniRef50_B5ZQW7 Transcriptional regulator, LysR family n=18 Tax=Proteobacteria RepID=B5ZQW7_RHILW Length = 302 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 71/291 (24%), Positives = 131/291 (45%), Gaps = 4/291 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + Q++ FV VA QGS+ A++ L++SQ +++++++ELE L LF R +G+ +T Sbjct: 1 MAFTLRQVQYFVAVAEQGSVTRAAQNLSISQSSVTEALKELETDLGVALFERHPRGLAIT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 G F +HA+ IL + A+ +Q L+G +NIG+ + ++ ++ +++R+ + P Sbjct: 61 HNGHQFLRHATKILASVSDARTSFAGQQSALSGTLNIGVTSLVAGYVLSDLLARYRRACP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 ++V +E + + L GELD + E L + ++ GHP + Sbjct: 121 GIEVSAIEDNGGYLEHLLVGGELDVAVMVISNLRDRMALQAEILETSPYRLWLPMGHPLV 180 Query: 183 GAR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 A S+ + M T + +LL P V + A SLVA Sbjct: 181 SADIISVADIAREPLIMLTVD-EIEENTGKLLSALGARPHVAFRTRSVEAVRSLVATGAG 239 Query: 241 LSKLPEEMGCD-PLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLI 290 ++ LP+ + L G + VS LP ++ R+ S + Sbjct: 240 VALLPDLVYRPWSLEGDRIESRDVSGSLPVVQVGMVWRKGSSLPQAARDFV 290 >UniRef50_C4ZKY3 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=C4ZKY3_THASP Length = 296 Score = 230 bits (587), Expect = 6e-59, Method: Composition-based stats. Identities = 85/292 (29%), Positives = 139/292 (47%), Gaps = 1/292 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K HQ+RA V+VA SIR A+R +++SQ AL+KS++ELEE + +L R KG+ T A Sbjct: 1 MKEHQLRALVQVAECSSIRAAARSMHLSQSALTKSLRELEEDVGEELMTRSYKGIEFTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G HA L L L A +IR +G ++ + + +P V+ + + P Sbjct: 61 GSMLLSHARLALSILDKAAREIRLLRGGAGARVVLAVTPMAGAVALPRVLREYEKLCPDA 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V + EG L ++ +L +G LDF I +E FE L + R GHP A Sbjct: 121 EVHLTEGLLSQVLPDLIEGRLDFAIAVADPAELPYEVIFEPLGPANAVLEGREGHPLAAA 180 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLVAKSDFLSK 243 + +L D + M GS + L ++ Q TP+ + C + + L+ ++D + Sbjct: 181 TTWAELRDAKFVMNLSPGSLGRALMSWMEQQGLPTPRHVIHCSSTLLMLELMQRTDCIGI 240 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 P + D G GL + V+ + P + L++ R + + T F R Sbjct: 241 GPGRLFDDKFVGYGLQRIDVTPMPPPMCFGLLRLRALPLSTAAKPMATLFSR 292 >UniRef50_P52686 SDS degradation transcriptional activation protein n=9 Tax=Proteobacteria RepID=SDSB_PSES9 Length = 306 Score = 230 bits (587), Expect = 6e-59, Method: Composition-based stats. Identities = 83/290 (28%), Positives = 135/290 (46%), Gaps = 9/290 (3%) Query: 6 KIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAG 65 + Q+R FV +A G A+ +N+SQPALS+SIQ LE GL +L R + V+LT G Sbjct: 3 DLRQLRHFVALAEHGHFARAAEAVNLSQPALSRSIQALENGLGCRLLDRGPRQVSLTAHG 62 Query: 66 ESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVK 125 +HA +L+ RA + + Q +G++ +G G L+P + RF HP V+ Sbjct: 63 RLVLEHARRLLDGDRALRSAVSQLDNLGSGELRLGAGPYPGARLVPRALGRFAGAHPGVR 122 Query: 126 VRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGAR 185 V++ S+ L L+ + + D + L IFCRPGHP +G R Sbjct: 123 VQLAIDTWYSLHQRLLDDALELFVADVRELRDDPQLEVTPLRSWPGVIFCRPGHPLLGRR 182 Query: 186 ----SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 + L Y + L +L + +G+ C+ F A +LVA+SD L Sbjct: 183 RHRLTAADLAAYPLAGTQVPAEVAQALGQLAESGQP---LGIECDNFMALKALVAESDVL 239 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEIL--PKAAYYLIQRRDSRQTPLTASL 289 S P ++ + + L +L ++ L ++AY L+ R +P ++ Sbjct: 240 SMAPLDVVAEEIEAGRLALLELAPGLLSQRSAYGLVSRAGRTLSPAAEAM 289 >UniRef50_A3K824 Transcriptional regulator, LysR family protein n=1 Tax=Sagittula stellata E-37 RepID=A3K824_9RHOB Length = 307 Score = 229 bits (586), Expect = 7e-59, Method: Composition-based stats. Identities = 71/301 (23%), Positives = 121/301 (40%), Gaps = 3/301 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I Q+R V AR S R A+ LN +QPA+SK I+ LE+ + +L R GV T+ Sbjct: 1 MDIRQLRYLVFTARYSSFRIAADKLNATQPAVSKGIRVLEQSVGVRLLDRGPWGVKPTEY 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE Q+ ++L A+ +I G G++ +G A+ R ++P RF ++ P+V Sbjct: 61 GERLIQYGEVLLALTEEARTEIDAMLGAKRGRLRVGSLATTVRGVVPTAARRFLKKSPEV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + E ++ +L +G +D + + D E + LL I HP + Sbjct: 121 DLTFYEELSPALQAQLLKGSIDVAVMSRPHDFPDDELEYRALLNSPMQIVADITHPLLQR 180 Query: 185 R--SIKQLLDYSWTMPTPHGSYYKQLSELLD-DQAQTPQVGVVCETFSACISLVAKSDFL 241 S+ L Y W +P L L Q P+ + +S++A S +L Sbjct: 181 ERLSLGDLTRYQWILPARPDPDRLTLDSLFSKAQLPLPKAVCETTSSRFQVSMLAGSPWL 240 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQ 301 S L L LP+ + + R+ P+ + + Sbjct: 241 SYLTTSSAYTSDDNAQLAPLPLPTPAWTRSVGVAYRKQRVSRPIVDGFLRELEIAAAEFS 300 Query: 302 S 302 + Sbjct: 301 A 301 >UniRef50_A1WVW1 Transcriptional regulator, LysR family n=11 Tax=Proteobacteria RepID=A1WVW1_HALHL Length = 318 Score = 229 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 61/298 (20%), Positives = 121/298 (40%), Gaps = 5/298 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + + Q++ F VAR S A+ L ++QPA+S I++LE+ + LF + K + LT Sbjct: 1 MNITLRQLQVFESVARHLSFTRAAEELYLTQPAVSMQIKQLEQQVGLPLFEQIGKRIYLT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 +AGE ++A I ELR + + +G +G++ + AS + +++ F ++ P Sbjct: 61 EAGEEVRRYAQRISAELRELADGLEALRGLNSGRLRL-TVASTANYFATDLLAAFTRRQP 119 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 V ++ +I ++ E+D + + P + E + I P HP Sbjct: 120 GVTFQLEVTNREGVIRRIQDNEMDLAV--MGRPPEGLDVAAEAFMPNPLVIIAAPDHPLA 177 Query: 183 --GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 +++L D + + + +L+++ + G+ + A V Sbjct: 178 DGSPIPLERLQDELFVLREQGSGTRNAVQRVLEERGMNLRGGLEMSSNEAIKQSVQAGLG 237 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 L + L L +L V + +YL+ R R +P + E Sbjct: 238 LGVVSIHTVALELELGRLRVLNVEGFPLERQWYLVHRSGKRLSPAAEAFRQFILDEAH 295 >UniRef50_Q1AUB8 Transcriptional regulator, LysR family n=2 Tax=Bacteria RepID=Q1AUB8_RUBXD Length = 320 Score = 229 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 122/290 (42%), Gaps = 6/290 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + Q+ F+ VAR G++ A+ + ++QP L+ ++ LEE L QLF R S+G+ LT+A Sbjct: 1 MLYRQLECFLAVARTGNLSRAAEEMYLTQPTLTARLKALEEELGDQLFVRTSRGMRLTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G F +A ++ + + + +G G++ +G + +P ++ RF +P+V Sbjct: 61 GREFLPYAERVVSSFEEGKRRLEELRGASGGKLVVGASPGVGTYALPGLLERFVGAYPKV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 V + G ++ + + E+ + + P E L E + + P H Sbjct: 121 NVSVRTGHSEDILEMVLREEVHLGLTREMRHP---EVESVPLYEDELVLVVAPEHRFTQR 177 Query: 185 RS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 S + ++ + + SYY+Q L + + A +V ++ Sbjct: 178 GSAGLAEIGEEQLILFDNDSSYYEQTQALFTSAGIRELRTLEVDNIEAAKRMVEHRLGIA 237 Query: 243 KLPEEMGCDPLHGQGLVMLPVSE-ILPKAAYYLIQRRDSRQTPLTASLIT 291 LP + LV++ V + + ++RRD+ + + + Sbjct: 238 FLPRSAIVRAVSAGNLVLIRVEDGPEMTRSIVALRRRDAPASGPVRAFLE 287 >UniRef50_C5BDD2 HTH-type transcriptional regulator AlsR n=2 Tax=Edwardsiella RepID=C5BDD2_EDWI9 Length = 330 Score = 229 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 70/308 (22%), Positives = 115/308 (37%), Gaps = 14/308 (4%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M +++I ++ F+ VA + A+ LN+SQP LS+ IQ LE L A L R ++ V+ Sbjct: 16 MVMRIEIRHLKYFIAVAEERHFNRAAERLNISQPPLSQQIQSLERELGACLLMRTNRSVS 75 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAV---ISRF 117 LT AG F + I+ +L A E + G + IG +S+ +P V + + Sbjct: 76 LTQAGSLFLKECYSIVGQLEQAAEKAARAHRGETGDLTIGFTSSV--PFIPRVAHSLFSY 133 Query: 118 HQQHPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRP 177 ++PQV +++ E I L G+LD I P L + Sbjct: 134 RHRYPQVHLQMRELNTKQQIEPLVDGKLDIGILRNTLLPGV--LKHRVLQREPLVAVLHR 191 Query: 178 GHPAI---GARSIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACI 232 HP A L D + + + Y +L LL P + + Sbjct: 192 HHPLAQRGQALRFSDLADQPFVFFSRGDGTALYDELLSLLKRAGIVPYITQEVGEAMTIV 251 Query: 233 SLVAKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQ 292 L++ +S LP + G+ + E +L R + +LI Sbjct: 252 GLISAGLGVSILPAS--YTRIQVDGVCYRALDEPDAYTEVWLAYHRQRPLSAQATALIAL 309 Query: 293 FRRECGYL 300 L Sbjct: 310 LTAPSSNL 317 >UniRef50_A3VLR4 Putative LysR family transcriptional regulator n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VLR4_9RHOB Length = 301 Score = 229 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 71/295 (24%), Positives = 133/295 (45%), Gaps = 3/295 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + + AFV VA+ S+ A+ L+++QPALS+ I+ LEE + AQLF R G++LT Sbjct: 1 MSLNNRHLSAFVTVAQARSLGRAAEQLHITQPALSRIIRNLEETVGAQLFERHPLGMSLT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 G++ A L+L + AA E++R G G + IG A L+ +S+ HP Sbjct: 61 PHGQALLPRAELLLADWGAALEELRSISGATTGTLRIGCVAGAVDPLIRHAMSQMLDAHP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA- 181 +++R+ + +I++L G +D + G + + + ++ R HP Sbjct: 121 NIQLRVTDAIEDRLIDDLLAGRIDLAVAGAVSGASQFDLEQVYVTSDWWQVYVRRDHPLQ 180 Query: 182 -IGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAKSD 239 + ++ L Y W M + +L E + T P + V + + ++ + S Sbjct: 181 DMARPALSDLARYRWVMVPEDSIAHFKLREAYHATSMTVPDIAVETRSLTVAVNALLASP 240 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 ++ +PE + + + L + + K Y+ +RR T T + + R Sbjct: 241 LVTLMPESLLRHEVELGLISQLTIPALAWKRELYIYRRRRGSLTFATRAFLDFLR 295 >UniRef50_Q46R60 Regulatory protein, LysR:LysR, substrate-binding n=3 Tax=Cupriavidus RepID=Q46R60_RALEJ Length = 325 Score = 229 bits (585), Expect = 9e-59, Method: Composition-based stats. Identities = 70/300 (23%), Positives = 121/300 (40%), Gaps = 3/300 (1%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 +V++ + FV V++ + A+ L ++QPA+SK++ ELEE +L R+ G L Sbjct: 13 RNRVRLRHLYCFVAVSQTQHLGRAADRLGLTQPAVSKTLSELEELAGTRLLVRQRAGTEL 72 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T AG F QHA IL ++ AA + + +I +G S+ +++ + RF + Sbjct: 73 TTAGTRFLQHALRILADIDAAAGSVTGESAKTHERIRLGALPSVVPAVLTDAVLRFRATY 132 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P+V + + G ++I++L+ LD I FE L + RPGH Sbjct: 133 PEVGLDVRTGMNRNLIDQLKADVLDLVIGRMDDPVAMESLWFESLGPDSLVLAVRPGHAL 192 Query: 182 I--GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAKS 238 ++ L + + LL P V L +S Sbjct: 193 TKDSRPTLIDCLAWPLVIAAAGSIPRHNTESLLARHGLRLPDGCVETSDAYLGRLLAEQS 252 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 D + P + GLV LP+ + + L++ +D TP+ +L R Sbjct: 253 DCVWAAPMSATRRAMDEGGLVALPIDTLGTEEPVGLLRHKDRTLTPMAEALADCIRAAAH 312 >UniRef50_Q0BF95 Transcriptional regulator, LysR family n=3 Tax=Burkholderiaceae RepID=Q0BF95_BURCM Length = 312 Score = 229 bits (585), Expect = 9e-59, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 128/297 (43%), Gaps = 3/297 (1%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 + ++K+ +R + + +GS+R A+ L++SQPA++K +Q++E L LF R +G+ Sbjct: 8 LRSRLKMQHLRLLLSIEERGSLRQAADALSLSQPAVTKMLQDMEALLGVTLFERHLRGLR 67 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 T G + ++A+L+ +L +++ + G++ IG + + LM VI R + Sbjct: 68 PTRFGMAVTRYANLVFSDLANLHDELVSLETGRIGKVRIGAVMAPTPVLMAEVIRRLKRD 127 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 HP + + + ++ L + +LD + +G TFE+L +++ A+ HP Sbjct: 128 HPGLNMTVHVDTSDMLVPMLERDQLDLVLGRVPEGWDASHLTFEQLGDERLAVVVGCDHP 187 Query: 181 AIGAR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAK 237 + +L Y W + + ++ T PQ + SL+ Sbjct: 188 LAKRTDPTFGELATYPWILQPRPSPMRALIDRSFEEAGVTAPQSTIETAAILMTTSLLTG 247 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 SD ++ +P + L +LPV Y ++ R + + R Sbjct: 248 SDLVAVVPMAVATFHASMGLLHILPVPLPRKLDPYGIVTRLGRPPSASMTLFVDVLR 304 >UniRef50_B9KUK0 Transcriptional regulator n=2 Tax=Rhodobacteraceae RepID=B9KUK0_RHOSK Length = 300 Score = 229 bits (585), Expect = 9e-59, Method: Composition-based stats. Identities = 72/301 (23%), Positives = 125/301 (41%), Gaps = 5/301 (1%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M+ ++ +R F+ + GS R A+ LN+SQPAL++ +Q E L QLF R ++ V+ Sbjct: 1 MSINFELLDLRTFLAIIDLGSFRKAAEALNISQPALTRRMQAFEYKLGNQLFERSTRNVS 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT+ G A L E+ + +G I+I + + S +P+VI RF Sbjct: 61 LTNVGREIEPMARRTLAEIDEQFGSLSDAGATRSGFISIACIPTSTLSFLPSVIGRFQTD 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P+ + RI++ +++ + G DF + + G D +F F L E +F C PG P Sbjct: 121 FPRARFRILDNSSAQVLDSVFDGTADFGLT--FTGQSDSQFKFTALFEDEFVALCAPGDP 178 Query: 181 AIGARSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 I +L + L A + LV ++ Sbjct: 179 IAQKARIAWSELNTLPLIGVNRSSGNRTLMDTRLSKDGIKLNWAHEVNHVIAAVGLVRQA 238 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 +S +P M DP L ++P+ + +++R +RQ L + + + G Sbjct: 239 VGVSVVPR-MAYDPRLMGDLRIIPLVNPVVSRRLGILERSGARQGRLVTAFLDLLKTFGG 297 Query: 299 Y 299 Sbjct: 298 A 298 >UniRef50_C4ZM05 Transcriptional regulator, LysR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZM05_THASP Length = 301 Score = 229 bits (585), Expect = 9e-59, Method: Composition-based stats. Identities = 85/293 (29%), Positives = 137/293 (46%), Gaps = 1/293 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K HQ++A V+VA GSIR A+R +N+SQ AL+K+++ELEE + A+L R KG+ T Sbjct: 1 MKDHQLKALVQVAESGSIRAAARAMNLSQSALTKALRELEEDVGAELLQRSYKGIGFTPE 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + A L+L + A+ +IRQ +G + + ++ +++PAV+S F + P Sbjct: 61 GSALLVRARLVLATIDKARAEIRQMRGGAGAHVKAAITPLLTATVLPAVLSAFRKAQPDA 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ EG LV + L +G++DF I +E FE L + R HP A Sbjct: 121 ELTFHEGLLVQALPGLIEGKIDFAIALASPQDLPYEIEFEPLADIDAVPMVRTTHPLAEA 180 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQ-TPQVGVVCETFSACISLVAKSDFLSK 243 R + D W + GS L L + P + C + + +V ++D + Sbjct: 181 RDWNTVADAEWVLNLSAGSQSMNLVGWLRARGFRAPTRILHCSSPYLILDMVRRNDLIGY 240 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 P+ + D G GL L + + P L+ R L RRE Sbjct: 241 GPKVLVTDAQVGVGLRPLALQPLPPTMPLGLMTLRGVPLGSAAKMLANLCRRE 293 >UniRef50_A6VSP2 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VSP2_MARMS Length = 296 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 126/296 (42%), Gaps = 7/296 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ ++ F+ VA + A+ L+++QP LS+ I+ +E+ + A LF R S+ V+LT A Sbjct: 1 MRFRKLNYFITVAEELHFGRAAARLHIAQPPLSQQIKAIEDEIGAVLFERSSQKVSLTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+ A +L++ QE +R +G +++G + I++F Q + V Sbjct: 61 GEALLPQARALLQDWEKIQEQVRSIANGTSGNLSLGFVWAAGTPHFSKGIAQFKQDNHGV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + + E ++ LR ++D + + + ++ + HP Sbjct: 121 TLNLEEMTTTHALDALRTKKIDLAMIFLNPLMDITDLEHQDYETQKHLLALPENHPLAQK 180 Query: 185 RS--IKQLLDYSWT--MPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 S + L + + H S Y Q+ L P + + +LVA Sbjct: 181 ESVPLSDLHQLPFISFVRQAHPSLYDQIMHHLHAAGVEPNIVQIARLTQTTRTLVAAGVG 240 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 ++ +PE D +GL P+ +LP+ + + R++ TPL LI + + Sbjct: 241 VALVPESTQFD--RREGLTYRPIDGVLPELDIHFVWRKNG-LTPLMERLIAHLQEQ 293 >UniRef50_C7I2X4 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I2X4_THIIN Length = 313 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 70/293 (23%), Positives = 117/293 (39%), Gaps = 8/293 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + +R FV VA + A++ L++SQP LS+ IQ LE L LF R GV T A Sbjct: 1 MDLRHLRYFVAVAEERHFTRAAQRLHVSQPPLSQQIQALETELGVPLFTRGRGGVQRTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRS-LMPAVISRFHQQHPQ 123 G++ A IL+ + A RQ G++ +G S+ + +MP ++ F PQ Sbjct: 61 GDALLPLARSILDAVEHAVAQTRQVGRGETGRLAVGFAGSMPFTDVMPRLLRDFRAAWPQ 120 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V + + E S I++L LD Q +D + + + HP Sbjct: 121 VALDLREQPSQSQIDDLLAHRLDLGFIRTTQLMHDPRLSTLVVQREPLLAALHADHPLAA 180 Query: 184 ARSIK--QLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 S++ L D + + + +Q L P + I L++ Sbjct: 181 RASLRLNDLRDQPFVIYSASLGAGLRQQTLALCAQAGFNPHIAQEVHEMPTLIGLISAGL 240 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQ 292 + + M L + P++++ L+ RRD Q PL + I Q Sbjct: 241 GVGIVAASMQRAQLPW--VAYRPLADVQASTEVLLVWRRDDPQPPL-RNFIAQ 290 >UniRef50_P77559 Uncharacterized HTH-type transcriptional regulator ynfL n=179 Tax=Gammaproteobacteria RepID=YNFL_ECOLI Length = 297 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 116/296 (39%), Gaps = 9/296 (3%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 +++ +R FV VA + A+ LN+SQP LS+ IQ LE+ + A+L R ++ V LT Sbjct: 1 MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQIGARLLARTNRSVLLT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASIS-RSLMPAVISRFHQQH 121 AG+ F + IL + A + AG++ IG +S + +S F + + Sbjct: 61 AAGKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSSAPFIRAVSDTLSLFRRDY 120 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P V ++ E I L +G LD + ++ + HP Sbjct: 121 PDVHLQTREMNTREQIAPLIEGTLDMGL--LRNTALPESLEHAVIVHEPLMAMIPHDHPL 178 Query: 182 IGAR--SIKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAK 237 ++ +L + PH Y + L+ TP + I LV+ Sbjct: 179 ANNPNVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYHLTPVITQEVGEAMTIIGLVSA 238 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 +S LP L+ + +P++E + +L+ + Q+P + Sbjct: 239 GLGVSILPASFKRVQLN--EMRWVPIAEEDAVSEMWLVWPKHHEQSPAARNFRIHL 292 >UniRef50_UPI0001C3192A transcriptional regulator, LysR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3192A Length = 343 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 58/284 (20%), Positives = 113/284 (39%), Gaps = 4/284 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+ FV VA + S A+ L+++QP +S ++ LE L QL R + V T+A Sbjct: 1 MELRQLEYFVAVAEEASFTRAAARLHVAQPGVSAQVRRLEAELGEQLLDRSGRSVRPTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + HA L + A + I + G + G++ IGM +S +++P +++ F + HP V Sbjct: 61 GVAVLPHARAALASVGAVRGAIEELTGLVRGRVAIGMVSSYPSAVLPDLLASFSRLHPDV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + E ++ L+ GELD + + + L ++ HP Sbjct: 121 EITLGEDNSDRLVQALQHGELDLALIGSARTGPPPGLATQTLTDEPLVAAVSHTHPLATR 180 Query: 185 RSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++ L L + P++ L A+ ++ Sbjct: 181 STLTVAALAGSPLMCLPRGTGIRTALDDACATAGVEPRIAFEASDPVPLALLAARGLGVA 240 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLT 286 LP + L + ++ P+ L R + +P Sbjct: 241 ILPASLAA--ARSGELHAIALTRPQPRGRIELAWRAEGPVSPAA 282 >UniRef50_B9JGZ8 Transcriptional regulator (Activator) protein n=3 Tax=Rhizobiales RepID=B9JGZ8_AGRRK Length = 400 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 65/293 (22%), Positives = 117/293 (39%), Gaps = 2/293 (0%) Query: 9 QIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESF 68 Q++A + V + A+R L ++QP + +++ +LE+ A LF R S G+ T ++ Sbjct: 106 QLQALIAVREMENFTLAARRLGLAQPTVHRAVTQLEQEAARPLFERTSYGIVATRTAQTL 165 Query: 69 YQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRI 128 Q A L EL A+ D+ + + AG+I IG ++P I+ F P++ +++ Sbjct: 166 AQAARLAFAELSQAEADLAETVSEEAGRIVIGAMPLSRSYVLPQAIANFRTLRPKIPIQV 225 Query: 129 MEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARS-- 186 +EG ++ LR+GE+DF I + L + HP IG + Sbjct: 226 VEGPYADLLAGLRRGEIDFLIGALRDPAPIGDVEQRVLFTDTLVLVAGRDHPLIGKDNIA 285 Query: 187 IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSKLPE 246 +++L Y W + K + D + P V + L+ ++D L + Sbjct: 286 LEELASYPWVVGLSGTPIRKHFDAMFDSLGRRPASIVESGSLILMRELLDRTDHLGCISY 345 Query: 247 EMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 L + LP + L R T + R+ G Sbjct: 346 LQAEAELTRGLIKALPYNLDHTARPIGLTLRSGWMPTAAQEQFLDLVRQRVGT 398 Score = 83.5 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 42/82 (51%) Query: 6 KIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAG 65 + +R F+ V S+ A+ + ++SQPA+++++ ++E G+ LF R ++G+ + G Sbjct: 14 NLRHLRVFLMVVDTASVTKAAELCHVSQPAVTQALSKIERGVGMALFTRTAQGLFVNKQG 73 Query: 66 ESFYQHASLILEELRAAQEDIR 87 E + L A D+ Sbjct: 74 EVLAKRVRRAFGYLDPALSDLS 95 >UniRef50_A8IAC4 Transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IAC4_AZOC5 Length = 313 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 73/292 (25%), Positives = 127/292 (43%), Gaps = 10/292 (3%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M+ + + Q+RAFV VA+ GS A+R+L +SQ ALS+++Q+LE L +L R ++ V Sbjct: 1 MSMNMNLRQLRAFVAVAQTGSFSRAARLLGLSQSALSQAVQQLEADLGVRLLDRTTRSVQ 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 L+ G F +L +L +D+R + G + + S++ L+P V+++F + Sbjct: 61 LSAIGREFLPGVQRVLADLDHQLQDLRDLKEHRRGHVTVTCVPSVALRLLPQVLAQFQEA 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 HP V V + E +I LR G+ + + D + LL FA+ R HP Sbjct: 121 HPMVSVAVREAPRHQIITALRSGDAELGVANV--PGDDPDLDSTFLLTDSFALVMRRDHP 178 Query: 181 AIGARSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVG-VVCETFSACISLVAK 237 S+ ++ P ++ P V E + +++V Sbjct: 179 LAAHESVTWEEAGQAGLIAMAPGTGIRLEME----RGLPAPAVPHHEAEHPATLLAMVEA 234 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASL 289 ++ LP + GL P+ E + +LI+R TP +L Sbjct: 235 GVGVAPLP-GLAWPRPDHAGLTFRPLVEPRVERQLFLIKRAGRDLTPAGRAL 285 >UniRef50_Q2RHG4 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RHG4_MOOTA Length = 302 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 131/292 (44%), Gaps = 7/292 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I+ + F+ +G++ A+ L+++QPA+SK +Q LE+ +L RR + V LT A Sbjct: 1 MNINHLITFITTVEKGTLSAAAEELHLTQPAVSKQLQALEDYFGLRLLERRGREVRLTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE Y+HA +I L + ++ + + G++ +G + + ++P +I F +++P+V Sbjct: 61 GEICYRHARIIASHLNQTRRELAELTQLVRGRLLLGASTTPGQYILPRLIGAFRREYPRV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V + ++ L++GE+D G ++ +L + + PGH GA Sbjct: 121 EVILTIADTQEVVQRLQEGEIDLG-VVGAAGGRGKNLSYSRLAGDELVLIVPPGHRLAGA 179 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQT---PQVGVVCETFSACISLVAKSD 239 +I +L + + + E L T Q+ + + A +S V Sbjct: 180 TAISPGELKEEPLVWRESGSGTRRVVEERLAAAGFTVDPEQIVMELGSTEAIVSAVEAGL 239 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLIT 291 +S + + L ++ + + K YL++RR +P + + Sbjct: 240 GISLVTSWAVEKSVKLGRLAVVTLQGVDLKRDLYLVRRR-QPLSPAAEAFVN 290 >UniRef50_C5CPN7 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CPN7_VARPS Length = 299 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 61/294 (20%), Positives = 127/294 (43%), Gaps = 3/294 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 V+ Q+ + + A+ +N+SQPA +K +Q+LE+ L +LF R ++G+ T Sbjct: 2 LHVRPRQLLLLARLDTHRHLGRAAEAMNISQPAATKLLQQLEDSLGERLFERLARGMEPT 61 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 GE ++A +L + +A+E++ + L+G + +G L+ + +H++HP Sbjct: 62 PYGEILIRYARRVLSDFGSAREEMLALRSGLSGSLRVGSVPGAVPELLAPALVEYHRRHP 121 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 QV V ++ M +L QG++D + + ++ LL + + R HP Sbjct: 122 QVAVSVVVETSDVMQAQLEQGDVDLVLGRLTDSHDEAKYASVPLLGESQVVVVRAAHPVF 181 Query: 183 GA--RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQV-GVVCETFSACISLVAKSD 239 ++ ++ ++SW + P + + + ++ + + A +L+ SD Sbjct: 182 ERATVTLAEMANWSWVLQPPGSPQRGRFEAAMREAGIQARLDIIETASPIAITALLENSD 241 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 + +P L +PV + L+ R+D +P A Q Sbjct: 242 MAAVMPASQASHYARLGVLRTVPVELPVRVPPICLVTRQDRALSPAAAQFRRQL 295 >UniRef50_D0J615 Transcriptional regulator, LysR family n=2 Tax=Comamonas testosteroni RepID=D0J615_COMTE Length = 306 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 75/302 (24%), Positives = 134/302 (44%), Gaps = 6/302 (1%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 + +RA V +++ S A+ ++++SQ ALS I +E + A+LF R ++ V LTD Sbjct: 5 NLSTKDLRAVVALSQTKSFGQAALLVHLSQSALSALIARVEAQIGARLFERTTRAVELTD 64 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 AG F HA IL + + A + G + + S++ SL+P V + F + HP Sbjct: 65 AGHVFIAHAQEILRDTQRALRAVTDTVQLRTGSVTVAALPSLAASLLPKVFAEFTRIHPG 124 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA-- 181 V++ +++ + +R G++DF + P + +E+L+E QF + C HP Sbjct: 125 VRLSLLDTLSGPAFDLVRDGKVDFALTA--ADPKQEDLAYEQLMEDQFFLICPDDHPLSK 182 Query: 182 -IGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 G +I+ LDY S + + L + + + +LV+ Sbjct: 183 HAGPVAIENTLDYPHVSMPSSASVRQYIDADLHSKGLYFAPVFEVDHIATIGALVSAGLG 242 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 +S LPE L LV +P+S + ++ RR + ++ +L R L Sbjct: 243 ISALPET-AVSLLQAGRLVQIPLSPPGIQRPLGMVMRRHAPRSSAAKALEALIRASLHNL 301 Query: 301 QS 302 S Sbjct: 302 AS 303 >UniRef50_Q46WQ0 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46WQ0_RALEJ Length = 304 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 65/300 (21%), Positives = 119/300 (39%), Gaps = 5/300 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 V + Q+RAF+ VA++ A+ L++SQ ++S I ELE+ L +LF R ++ + +T Sbjct: 7 MNVSLRQLRAFIAVAQERHFTRAAEKLDLSQSSVSALIHELEDNLGLKLFDRHTRQLHIT 66 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 AGE + ++ +A E + + G+++I + + ++P I F HP Sbjct: 67 QAGEELLPLVKKAVADIDSAIETSSELRTLGRGRVSIAASSIQAALMLPRFIREFSLGHP 126 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 VKV I + + + GE+DF I T +G D T +L F I P HP + Sbjct: 127 GVKVDIHDVSEHEVPKMVSSGEVDFGIGTIPEGQPD--LTAHRLSTDPFVIVMPPDHPLL 184 Query: 183 GARSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 ++++ + P L L + T + +V Sbjct: 185 RRKTLRWEDVAPIPLIGPHKGNPIRDCLDTALAARGITLSRLHEVLLPLTMVGMVEAGLG 244 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 ++ + + GL + ++ + L+ D +P R G L Sbjct: 245 IAVMSAAV-TRLTEALGLATVMPTDPVIHREISLLVHADRSLSPPAQRFRDLLMRNRGNL 303 >UniRef50_Q4ZY05 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Pseudomonas syringae pv. syringae B728a RepID=Q4ZY05_PSEU2 Length = 298 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 127/294 (43%), Gaps = 4/294 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + +R FVEV RQGS A+ +++++Q ++SK+++ LE+ L L R LT A Sbjct: 1 MNLRTLRTFVEVVRQGSFSQAADVVSLTQSSVSKAVKTLEDELGTPLLSRIGHRSELTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE Y+ A +L E ++ +G G + IG+ S +L A+ +++ ++P + Sbjct: 61 GEIVYRRALTLLAERNDLLTELNDLRGLKGGVLRIGLPPVGSGALFAAMFTQYRARYPDI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +++ E + L GE++ + EF ++ + + + HP Sbjct: 121 DIQLTEHGASKLHECLASGEVELA-ALLKMNSFSEEFDYQDVRIEPVVVVMAENHPLAKR 179 Query: 185 RS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + I+ L + + + + + D + TP+V + LV+ ++ Sbjct: 180 KRVVIEDLAETPFILFEAGFALNTMIKLACDRKGVTPKVTARSGQVDFIVDLVSAGLGVA 239 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 LP + H G+ ++ ++E L R+++ +P + + R Sbjct: 240 FLPRMLAQKHYH-DGIRLVALNEPDTDWHMVLAWRKNAHLSPAAEAWLALARET 292 >UniRef50_A4XPG0 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas mendocina ymp RepID=A4XPG0_PSEMY Length = 294 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 67/290 (23%), Positives = 126/290 (43%), Gaps = 5/290 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + +H ++ F+ VA GSI + L++SQPA+++ I+ELE L +LF R +GV LT+ Sbjct: 1 MNLHHLKVFLAVAEAGSISAGAERLHISQPAVTREIRELEANLDLRLFDRLPRGVQLTEG 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ +A I +AA+ D+R G++++G A++ L+P +ISRF HPQ+ Sbjct: 61 GQRLLDYARRIFALEQAAERDLRDFAQLEQGELHLGASATLGAYLLPPLISRFRALHPQI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 V + ++ +L G + ++ ++ L P HP Sbjct: 121 FVSLEVSNTEAVTRQLDDGRI--SLGFVEGPFAQADYDHRLLARDALLPVVAPRHPLART 178 Query: 185 RS---IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 + +L Y M P + P+ G+ + A L+A + Sbjct: 179 AAPLQASELQAYPLYMREPGSGARASVEHAYRVHGLEPRAGMAIGSTEALKRLLADGQGI 238 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLIT 291 + L + + L L L V ++ + +++ R + +P A+ + Sbjct: 239 AWLSQRVVERELASGELQRLTVQDLQIERELHVLWRPGASLSPAPAAFLA 288 >UniRef50_A0LNI4 Transcriptional regulator, LysR family n=4 Tax=Deltaproteobacteria RepID=A0LNI4_SYNFM Length = 302 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 127/298 (42%), Gaps = 7/298 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + IH++ F V GS A+ + ++QP +S+ ++ LEE L +L R + V T A Sbjct: 1 MDIHRLVVFCRVLEMGSFTKAAEAVCLTQPTVSEHVRALEETLGEKLIDRLGREVLPTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ YQ+A I++ A + + + +G L+G + IG ++P +I F + +P + Sbjct: 61 GKILYQYARDIIQLRDEAVQALEKFKGNLSGALLIGASTIPGTYVLPELIGSFKKSYPAI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI-- 182 ++ + ++ G ++F + D E+ + + HP Sbjct: 121 QITLRITDSAEVVARTIDGGVEFGVIGARLE--DRRIVLEEAFSDELVLAVFRDHPWAVR 178 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTP---QVGVVCETFSACISLVAKSD 239 + S+++L + + +++ L+ +P + + A + Sbjct: 179 KSVSLEELAGEPFILRERGSGTRIVMNQALEAHGFSPTKLNIVAEMGSTEAIRQGIKAGI 238 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 +S L + L L +P++ I ++L+QR++ + +PL ++ + R + Sbjct: 239 GISILSHRAVAEDLRHGSLFAVPLAGIRFSRPFFLVQRKNRQMSPLCSAFLNHLRFQA 296 >UniRef50_C6D4H5 Transcriptional regulator, LysR family n=4 Tax=Bacillales RepID=C6D4H5_PAESJ Length = 303 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 126/298 (42%), Gaps = 7/298 (2%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + HQ+ F VA +GS A++ L+M+QPA++ +Q LE+ +L R +K + LT Sbjct: 1 MALNFHQLHIFYTVAERGSFSAAAQSLHMTQPAVTMQVQSLEDYFGTKLLQRSTKRIDLT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 +AG++ +A +E +R + + QL G++ +G +I ++P ++ F Q P Sbjct: 61 EAGKALMPYARRSIELIRDTDQAMSAFTKQLKGRLQLGASLTIGEYILPRLLGPFGQTFP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 ++ + + +I E+ +L F + + E ++ + + HP Sbjct: 121 EISISMKVMNTAQIIEEIINHQLTFGL--IEAPVNHPDMQMEAVMSDELKLIVPKDHPLS 178 Query: 183 GARS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTP---QVGVVCETFSACISLVAK 237 + + ++ DY + + + E L + P ++ + + A S V Sbjct: 179 KRQKVLLDEVADYPFVVREQGSGTRLVMEEQLKRKKIDPADLKIVMELGSTGAVKSAVEA 238 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 +S + E + L ++P+ + K +Y I + + + +T R Sbjct: 239 GLGVSFVSESSVKHEVALGLLHVIPIEDTRFKRQFYSIYLKSTLLPISAVTFLTFLRE 296 >UniRef50_B5ELK2 Transcriptional regulator, LysR family n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ELK2_ACIF5 Length = 308 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 74/308 (24%), Positives = 126/308 (40%), Gaps = 17/308 (5%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 +++ +R F+ VA A+ L +SQP LS+ I LEE L A+L R ++ V LT Sbjct: 1 MSLELRHLRYFIAVAEDLHFSRAAERLGISQPPLSQQIHTLEEMLGARLLVRTNRRVALT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASIS-RSLMPAVISRFHQQH 121 DAGE+F + A IL ++ A + +R + G+++IGM S +P I RF + Sbjct: 61 DAGEAFLKEARAILVQVDRAVDYVRSVERGEKGELHIGMTRSAMLAKQVPRAIFRFRTEF 120 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP- 180 P V + + E + I+ L ++ I P L HP Sbjct: 121 PSVHLGLEELNSLEQIDALIHEKIQVGIMRVQHLPAM--LQSHMLYADPLVAVLPAKHPF 178 Query: 181 ------AIGARSIKQLLDYSWTMP--TPHGSYYKQLSELLDDQAQTPQVGVVCETFSACI 232 QL+ + + + Q ++ D P++ + S I Sbjct: 179 CPISPTLSVPLDPAQLVHEQFIIFADSAGTGIRNQFYQICHDAGFNPRIVQEVQEASTMI 238 Query: 233 SLVAKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQR-RDSRQTPLTASLIT 291 LVA ++ LP + L + +P+S ++ +++ R RD +PL L+T Sbjct: 239 GLVAAGLGITILP--VSYSYLQQDSVCYIPLSSPSARSDIHVVYRCRDH--SPLLRQLLT 294 Query: 292 QFRRECGY 299 + E Sbjct: 295 ILKSEAAA 302 >UniRef50_A9BVL3 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=A9BVL3_DELAS Length = 299 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 75/294 (25%), Positives = 138/294 (46%), Gaps = 9/294 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+R F+ +A + A++ L++SQP LS +I++LEE L AQLF R SK V LT A Sbjct: 1 MELRQLRYFLVLAEELHFSRAAQRLSISQPPLSVAIRQLEEELGAQLFERTSKEVRLTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ A I+E+ + ++D+R + G+I +G S +P + F +HP V Sbjct: 61 GKHLRVQAQDIMEQAQRVRQDMRAIADGVQGRIRLGFVGSAIYRGLPEALESFRARHPLV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ ++E I L+Q LD + + L+ + F GH G Sbjct: 121 RIDMLELNSAEQIAGLQQERLDLGL--LHATRPAPGLQSHTLVSEPFMACLPAGHALAGQ 178 Query: 185 RSI--KQLLDYSWTMPTPHGS--YYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 R++ +QL + + S Y++Q+ ++ + TP + + + +S+V+ Sbjct: 179 RTLQVRQLAGERMVLFSRQVSPDYHQQIWQICQSEGFTPDLHHEVRHWLSVLSMVSLDQG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 +S +P + + GL +P+ P++ + Q PL SL+ R Sbjct: 239 VSLVPSCL--QRVGFPGLAFVPIQGRHPQSQMQAMWHPGHVQ-PLVESLLAHLR 289 >UniRef50_C1DGS2 Transcriptinal regulator, LysR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DGS2_AZOVD Length = 301 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 62/276 (22%), Positives = 107/276 (38%), Gaps = 9/276 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+R F+ +A A+ L+++QP LS+ I LE L LF R S+ V LT A Sbjct: 2 IELRQLRYFMALAEHLHFGKAAESLHITQPPLSRQISALEADLGVVLFSRHSRSVELTAA 61 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G F QHA L EL A R G++ + + L+P ++ + +P V Sbjct: 62 GRDFQQHAKTALAELDLAIRSTRASARGERGELRVSFTMVAAWILLPELLKAYSDAYPDV 121 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + + E + L +GE D + G + L + HP A Sbjct: 122 SLALNEVLPRDLGPALERGEADIALTFPSSG--SKSLCYRALRREPLCAVLPASHPLAAA 179 Query: 185 R--SIKQLLDYSWTMPTPHG--SYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 SI L D + + ++ + P++ + ++LVA+ Sbjct: 180 TEFSIAALADEPFITFPRQTAPALHEAVMSCCRRAGFEPKIRLETHLQQTIVNLVAEGLG 239 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQ 276 +S +P M + G + + P Y +I Sbjct: 240 VSVVPGSMRKMRMPGVAFKAI---DRSPPVEYGVIW 272 >UniRef50_Q21IY2 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=Q21IY2_SACD2 Length = 299 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 111/295 (37%), Gaps = 8/295 (2%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M + ++AF+ VA S A++ L ++QPA+SK I LE+ L LF R + V Sbjct: 1 MITSMDTDGLKAFLAVAEHHSFSVAAQHLFITQPAVSKRIAALEQELNHILFDRLGRDVA 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT+AG++ A IL + AQ IR+ G++ G + + I +P ++ F Sbjct: 61 LTEAGQALLPRAQAILNSMHEAQRTIREFSGEIVGTLRVATSHHIGLHHLPPILREFAAN 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 H QV ++ ++ +G+ D + T + L HP Sbjct: 121 HKQVNLQFDFLDSEQAHEKVLRGDCDLAVVTLAPT-LEENLEASVLWPDPLCFIVGANHP 179 Query: 181 AIGAR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 ++ S+++L +P + + + D Q + + +V Sbjct: 180 LATSKNISLEELSRTPAILPDLNTYTGRLVKHFFDTQGLALNLNMATNYLETIKMMVTVG 239 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 S LP+ M L +LP+ I + ++ + + Sbjct: 240 LGWSVLPKTMVDSSLK-----ILPIKNIQLERQLGVVIHKKRTLGNAARAFFEVL 289 >UniRef50_C0ZI31 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI31_BREBN Length = 293 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 66/290 (22%), Positives = 122/290 (42%), Gaps = 14/290 (4%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + Q++ FV A+ GS A+ + +Q A+S+ IQ LE+ L LF R G+T T Sbjct: 1 MTLTQLQVFVAAAKAGSFTRAAEEIGFTQSAVSQMIQSLEKELGVSLFQRSRSGITPTSI 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE HA IL E+ +G +G + I S++ +P ++ F ++ P V Sbjct: 61 GERMLSHARDILNITSCMTEEANVARGISSGTLRIASIPSVASRFLPGLLGSFRKRFPAV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + ++EG + N L +D D E LL+ + + HP + Sbjct: 121 DILLLEGDSDEISNWLHSSVVDIAFTVM----PDKEMQTLPLLQDEMMVILPDTHPLKDS 176 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++++ ++ + + MP + ++L + TP V +++V + ++ Sbjct: 177 QTLRFSEIAERCFIMPKDGC-----IRKMLQENQITPTVTFEVREVYTILTMVQEYIGVT 231 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQ 292 +PE P +V +P+S + L R +PLTA Sbjct: 232 IMPE--LYMPPVIPKVVAIPLSPPIT-REVVLAVRNWQSISPLTAEFAVH 278 >UniRef50_UPI00004DBCAD UPI00004DBCAD related cluster n=2 Tax=Xenopus (Silurana) tropicalis RepID=UPI00004DBCAD Length = 312 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 72/301 (23%), Positives = 131/301 (43%), Gaps = 5/301 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + + Q+ AFV+VA GS R A+ L SQPALS+ I++ E+ L A+LF R ++ V++T Sbjct: 1 IDLSLQQLEAFVQVAAAGSFRQAALRLGQSQPALSRFIRQAEQTLGARLFDRDTRHVSIT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 DAG+ A +L + A D + +G+I + S S +L+P ++ F + H Sbjct: 61 DAGKELLPIAQRVLRDFDDALGDFGEFMAGHSGRIVVAALPSTSIALLPQALAAFSRTHS 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 QV + E ++ + +G DF I+ + + L + F + CR P Sbjct: 121 QVTFALTEAPAEVLLALVEEGRADFGIS--VRPAPRQRLQYRHLFDDPFVLVCRRDDPLA 178 Query: 183 GARSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 S+ + S + Q + + ++C +LVA Sbjct: 179 ARESVPWSAFSTRPCIVAGSRSSIRPVTDAVFLRQRMPVHPVLEYPSVASCGALVAAGVG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 ++ LP + + L+ LV LP+ L ++ R +P++ + + ++ L Sbjct: 239 ITALP-MLALELLNMVELVALPLQRPLMSRPIGIVTRIGRSLSPVSKAFMASLTQQTCVL 297 Query: 301 Q 301 Q Sbjct: 298 Q 298 >UniRef50_A4YQI9 Transcriptional regulator of protochatechuate degradation (LysR family) n=14 Tax=Proteobacteria RepID=A4YQI9_BRASO Length = 316 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 72/292 (24%), Positives = 128/292 (43%), Gaps = 11/292 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + Q+ FV+VA GS A+ +L+++QPALS+ ++ LE L QLF R +GV LT+A Sbjct: 18 MNLKQLEYFVQVAELGSFSKAASVLDVAQPALSRQVRALESELKQQLFARNGRGVELTEA 77 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ H+ +L+ + A+ED+ + G++ IG+ SI+R L +I RF +++P Sbjct: 78 GKRLLDHSVGVLQLVAHAREDLGASRDAPVGRVTIGLPPSIARQLTLPLIDRFRKEYPAA 137 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ ++EG ++ + G +D + Y +L++ A+ H G Sbjct: 138 RLAVVEGLSTHVVEWVTTGRID--VGMVYNPEAQAGIEITPVLQEPLALV---SHAPKGK 192 Query: 185 RSI------KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 R + +L YS MP + + L + + + I LV Sbjct: 193 RRVTAPLPMTELSRYSLIMPERVHAMRRLLETQAALAGIRLDIAWEVSSVPSIIDLVCAG 252 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLI 290 + L L + P++E P + + R TPL I Sbjct: 253 YGHAVLTPSGVAASGRASELTIRPLTEPAPTSVLCFVTSAHKRPTPLAQQTI 304 >UniRef50_Q221U4 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=Q221U4_RHOFD Length = 328 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 76/300 (25%), Positives = 137/300 (45%), Gaps = 3/300 (1%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++K Q+ + + ++ A++ NMSQPA SK ++++EE F R +GV T Sbjct: 28 KLKTRQMFLLLALDEARNLHQAAKETNMSQPAASKMLKDIEELFGVPFFDRLPRGVRPTL 87 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 GE+ +H + L L Q+ I Q L+GQ++IG+ + S +L+P I+R Q+ P+ Sbjct: 88 YGETMIRHVRMALTNLSQGQDSIATLQAGLSGQVDIGVIITPSTTLVPQAIARTKQEAPR 147 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 + + + G ++ L++G+LDF I + D + +E L E+ R GHP + Sbjct: 148 LCIGVEVGTSNELVERLKRGQLDFLIARIREQEDDLDLLYEDLSEETECAVARVGHPLLA 207 Query: 184 ARS--IKQLLDYSWTMPTPHGSYYKQLSELLDD-QAQTPQVGVVCETFSACISLVAKSDF 240 + L W + + + + +TP V S SL+ ++DF Sbjct: 208 RSDLGLNDLAAAGWILSPRGSILRHRFDMMFRRIELETPANVVEATAISVITSLLQQTDF 267 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 L +P E+ + L +LP+ ++ +I RRD +P L+ R + Sbjct: 268 LHVMPLEVARYYVRCSELAILPIELPCKMDSFGVIARRDQLLSPGAKLLLQHLRTIAAEI 327 >UniRef50_C5BQI4 Transcriptional regulator, LysR family n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BQI4_TERTT Length = 305 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 68/292 (23%), Positives = 129/292 (44%), Gaps = 5/292 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I Q+R V +A + + A+ L+++QPALS+ +++LEE + + LF R +G+ LT A Sbjct: 1 MDIKQLRYLVGIADEQHVGRAAERLHVTQPALSQQLRKLEEEIGSPLFERHHRGMRLTIA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ +HA IL ++ A+ +I ++IG S++ L+P ISR + P + Sbjct: 61 GQVMLKHARQILAQMEDARNEIDSLADTGECLVHIGTIQSMNFHLIPTAISRLQESEPNI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 VR+ E + + + + +LDF I + E+L + F + HP Sbjct: 121 HVRVAELSGSQLEDSVAKEKLDFGIGFLPT--IREDLVTEQLFSENFYLAVHRSHPLAEQ 178 Query: 185 RSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + KQL S + T + + P++ V T ++ + + S Sbjct: 179 EVVDFKQLHGLSMALLTDRYISRRLFDTAALRASIRPKIKVETNTTASLLLIACVSQLAV 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 LP + + + + M+ + + + LI +++ T SL R Sbjct: 239 VLPRAAIPEWIQSK-VAMITLKNPTLQRSVGLIWGKNNVLTHQALSLAASIR 289 >UniRef50_A5VC48 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VC48_SPHWW Length = 321 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 79/298 (26%), Positives = 135/298 (45%), Gaps = 3/298 (1%) Query: 6 KIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAG 65 ++ + V +A GSI A+ L +SQP SK +Q+LE+ L A LFFR ++GV T+ G Sbjct: 9 RLRHFQLAVAIAENGSILRAAGALGLSQPTASKLLQDLEDSLHAPLFFRGNRGVEPTELG 68 Query: 66 ESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVK 125 F +HA +IL +L ++ +G + +G + S L+P + R + P + Sbjct: 69 REFVRHARVILAQLGQTSMALQALSTGASGTVALGTLLAASSHLLPTTLLRLRRTRPNIS 128 Query: 126 VRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA- 184 +RI+EG ++ L GELD + Q + ++ E LL FA+ R GH G Sbjct: 129 LRIVEGTNDHLMPRLLSGELDLVLGRLSQIRHRNDVDQEPLLRDVFAVISRRGHKLAGRA 188 Query: 185 -RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQ-TPQVGVVCETFSACISLVAKSDFLS 242 + +LL + W +P P + +Q L D +P + +F L+ SD L Sbjct: 189 GVPLHELLGFDWILPPPETTLRRQFEALFHDAGLNSPPAAIESISFLTNHRLLLDSDMLG 248 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 P + GL ++ + P + +R+ + +P ++ + R L Sbjct: 249 VWPRPVIDHGPDRDGLAIILPAATFPVGTIGISRRKGTLLSPAAEAVAAELRATAAEL 306 >UniRef50_C1M4D9 Putative uncharacterized protein n=2 Tax=Citrobacter RepID=C1M4D9_9ENTR Length = 302 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 68/296 (22%), Positives = 116/296 (39%), Gaps = 9/296 (3%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 +++ +R FV VA + A+ LN+SQP LS+ IQ LE+ + A+L R ++ V LT Sbjct: 1 MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQILEQQVGARLLARTNRSVALT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASIS-RSLMPAVISRFHQQH 121 AG+ F + IL + A + AG++ IG +S + +S F Q + Sbjct: 61 SAGKQFLADSRQILGLVNEAAARAERLHLGEAGELRIGFTSSAPFIKAVSDTLSLFRQSY 120 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P V ++ E I L +G LD + E +L + HP Sbjct: 121 PAVHMQTREMNTREQIAPLNEGTLDLGL--LRNTQLPETLEREIILHEPLMAMIPRAHPL 178 Query: 182 IGAR--SIKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAK 237 ++ +L + + PH Y + L+ P + I LVA Sbjct: 179 AQKPVVTLAELANEPFVFFDPHVGTGLYDDILGLMRRYGLKPTIAQEVGEAMTIIGLVAA 238 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 +S LP L+ + +P++E + +L+ + Q+ Q Sbjct: 239 GLGVSILPASFKRVQLY--EMCWIPIAEEDAVSEMWLVWPKHHEQSHAAQRFREQL 292 >UniRef50_Q12CP1 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q12CP1_POLSJ Length = 315 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 84/278 (30%), Positives = 138/278 (49%), Gaps = 1/278 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +I F+ V GSIRGA+R L +SQPAL++++Q+LEE L QL R +G +LT A Sbjct: 1 MRLQRIEQFIAVVDAGSIRGAARRLGVSQPALTRALQQLEEELGVQLMQRSVRGASLTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +F A + ELR ++ R+ G + +G+ S + L+P ++ QQ P Sbjct: 61 GSAFLARARVAEAELRMGADEARRSSDDGGGLVTVGVSPSAASLLLPEFVTALRQQRPNT 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++R++E ++ +R+ LD + + + D F L E Q + RPGHP A Sbjct: 121 RIRLLELSPGTLPPLVREAALDMAVAHHARSHLDAGLRFRPLFEIQMRVVVRPGHPLASA 180 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSE-LLDDQAQTPQVGVVCETFSACISLVAKSDFLSK 243 RS+ +L+ +W G + + L + P V C + S + L+A SD + Sbjct: 181 RSLNELVQCAWLSMAAPGLPGDLIRQSFLAEGLPAPVPAVHCGSHSVALDLIAASDMVGL 240 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSR 281 LP + + LV LP+++ L L R DS Sbjct: 241 LPPALLRSCMAAGRLVELPMAKPLVPLDVGLYTRADSP 278 >UniRef50_Q2T940 Transcriptional regulator, LysR family n=6 Tax=Burkholderia RepID=Q2T940_BURTA Length = 395 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 65/297 (21%), Positives = 118/297 (39%), Gaps = 8/297 (2%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M + I + V + A+ L++SQ ALS+ I++LE+ L AQLF R + V Sbjct: 84 MQRNPLLRNICYLLAVDEHRNFTRAAEALSISQSALSQKIRQLEDELGAQLFDRSGRVVQ 143 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LTD G + ++A +L AQ + GQ+ IG + + L+ VI FH++ Sbjct: 144 LTDFGGVYLEYARRAHSDLLTAQRALNDVHDLSRGQLRIGFTPTFTEYLIAPVIEHFHER 203 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 +P + + + E L ++ L ++D E E L ++ + HP Sbjct: 204 YPGIVIEMTEMSLDAVETALGDDQVDLAFGFV--DVRSDEIEAEALFPERLMLVAGATHP 261 Query: 181 AIGAR---SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAK 237 R + QL + + T + P V + + SA + +V + Sbjct: 262 LTTQRDPITPDQLAETPLALLTTSFVSRFYIDSYFQSYDMKPNVALQANSISAVLKIVRR 321 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 + LP + + L +P+ P L++R+ + +T + R Sbjct: 322 GKIATILPGTI---EFEHRDLQYVPLDPPFPVRTVALLRRKGAYRTVAATAFAASVR 375 >UniRef50_C5BEX8 Transcriptional regulator, LysR family n=12 Tax=Enterobacteriaceae RepID=C5BEX8_EDWI9 Length = 312 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 67/293 (22%), Positives = 122/293 (41%), Gaps = 6/293 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + +R FVEV RQ S A+ L ++QP +SK ++ LEE L L R +G+ LTD+ Sbjct: 1 MDVRTLRYFVEVVRQHSFTRAAEKLFVTQPTISKMLRNLEEELGCTLLIREGRGLRLTDS 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G YQ A IL++ + ++ G + +G+ + M +I F Q++P + Sbjct: 61 GNVVYQRAQTILDQFGQLRTELDDLGALKKGSLKLGIPPMVGTQ-MAGLIGEFRQRYPGI 119 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ I E +++ + GELD + P D L + P + Sbjct: 120 ELHIAEFGGLTVEQAVLSGELDLALTALSAQP-DPAIASLPLFSHPLYVLLPRQAPWLTR 178 Query: 185 RSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++ L + + + Y+QL + PQ+ V + ++V ++ Sbjct: 179 SALGMTDLAQQNILLYNEDFALYQQLMQAFSAAGVKPQIAVRSGQWDFLAAMVQAGVGIA 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 LP+ + C L L+ LP++ L LI + + I + R Sbjct: 239 ILPQPI-CQRLDPHSLLWLPLAPTL-MWRLGLIWCHGRYLSHSAQAWIARCRE 289 >UniRef50_A7IIT4 Transcriptional regulator, LysR family n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IIT4_XANP2 Length = 303 Score = 226 bits (578), Expect = 6e-58, Method: Composition-based stats. Identities = 73/300 (24%), Positives = 119/300 (39%), Gaps = 4/300 (1%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++K+ I F+EVA + A+ L ++QPA+S++I ELE+ L A LF R G LT Sbjct: 5 RMKLRHIACFLEVAARSGFGRAADALGLTQPAVSRAIAELEDILGAPLFERGRGGAVLTP 64 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 G +F HA EL + +R+ + +G +++ +MP I R + Sbjct: 65 QGIAFRTHAGAAFAELGRGIDTLRRPAAGDV-VLKVGALPTVAARIMPGAIRRAKEMGLD 123 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA-- 181 + I G +++ L +G LD + + TFE L + R GHPA Sbjct: 124 ATIAIEAGSNGWLLDLLTEGRLDLVVGRLAEPKAMMGLTFEHLYSEPIVFVARRGHPADT 183 Query: 182 IGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAKSDF 240 + +L + + MP P ++ L + P + S + V SD Sbjct: 184 GHPVGLVELARHPFIMPGPGSIIRPEIDRLFLMEGLAGPAERIETTDASFSRAYVGASDA 243 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 + + + L LV LP+S + L R P A + R L Sbjct: 244 VWVISHGVVAGDLDAGTLVRLPLSMSISGGPVGLTTRAGHAPLPQAAIFLEALREVARAL 303 >UniRef50_Q127N6 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q127N6_POLSJ Length = 328 Score = 226 bits (578), Expect = 6e-58, Method: Composition-based stats. Identities = 65/293 (22%), Positives = 124/293 (42%), Gaps = 5/293 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 V + Q+RAFV VA+ S A+ L+++Q ALS I+ELE L Q+ +R ++ V L+ Sbjct: 1 MNVTLRQLRAFVAVAKSASFTEAAATLHITQSALSGLIKELEHVLGVQVVYRSTRKVQLS 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 + G F A+ IL++L A I + +G + + ++ +LMP I+ F+ ++P Sbjct: 61 EVGGEFLPLATRILQDLDEAYHAIHDLKALKSGVVRVAAPQLMACTLMPDAIAAFNSKYP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA- 181 V++R+ + + ++ +++ GE+DF I + E L E F P HP Sbjct: 121 AVQIRLSDCAVEAVQSKVHSGEVDFAIG--PEREVSPEIATHSLFEIPFVAVFPPDHPLG 178 Query: 182 -IGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + + + Y + T G+ + +S+V+ Sbjct: 179 KLKRVTWTDISRYPLISLQGEYTQRLSADLQAASGNLTLSPGMEVTFMTTALSMVSAGLG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 ++ L+ GL + + +YL+ ++D +P Sbjct: 239 VTTC-LPYATSLLNLYGLQTRLLQAPTLRRKFYLLTKKDRPLSPAAQGFSDFL 290 >UniRef50_C4KR89 Transcriptional regulator, LysR family n=67 Tax=Proteobacteria RepID=C4KR89_BURPS Length = 338 Score = 226 bits (578), Expect = 6e-58, Method: Composition-based stats. Identities = 78/287 (27%), Positives = 131/287 (45%), Gaps = 5/287 (1%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 + + Q+RAF +A GS+ A+ L+++QPALS+ ++ LEE + A LF R SKGV L Sbjct: 34 SMTFDLRQLRAFTTIAASGSLGRAADALHVTQPALSRILKRLEEQIGAPLFERHSKGVQL 93 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T GE+ HA+L+ E A+E+I +G G I +G SI+ ++P + R + Sbjct: 94 TAIGEALLPHATLLQHEAEHAREEIDALRGLAKGTIKVGAVGSIASLVLPVALGRVLDRW 153 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P ++V I+EG +++ L E+D ++T + E + + P HP Sbjct: 154 PNLRVVIVEGVWDRLVDALLTHEIDIALSTRVPDTDEVVAIAECRWDDVSHVVAAPDHPL 213 Query: 182 IGAR----SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQ-TPQVGVVCETFSACISLVA 236 A ++ W +P + ++Q+ D P + V + +A SLVA Sbjct: 214 RAAARAPLTLADTRAARWAIPPRGTAPFEQMRAAFDAHGLAPPDIAVETRSVTALKSLVA 273 Query: 237 KSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQT 283 + FLS + E M + + L V + +RR Sbjct: 274 HAGFLSWMAEPMYRAERRARTIDTLAVEGVAATRTLTAFRRRHGILP 320 >UniRef50_Q11BY5 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11BY5_MESSB Length = 307 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 66/282 (23%), Positives = 119/282 (42%), Gaps = 11/282 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + Q++ F +A + R A+ LN++Q LS +IQ LE+ L A+LF R + V LT+ Sbjct: 1 MNLKQLQYFSVLAEELHFRRAAEKLNITQSPLSIAIQNLEQELGAKLFHRNQRSVQLTEV 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLM---PAVISRFHQQH 121 G Y HA ++ L ++DIR AGQ+ I + + SL+ P +IS F ++ Sbjct: 61 GRRLYDHAQGLISRLEHCEQDIRAIVNGKAGQLRIAF--TAASSLLSPFPKLISAFQKKF 118 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P++ V++ V I+ L +G +D + + E + +L + + GHP Sbjct: 119 PEIDVQLQSMTTVQQISALSEGTIDIGLLRRPRQSIPAEISTRRLATDRLVVALPSGHPL 178 Query: 182 IGA--RSIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAK 237 +I +L + Y Q +L P + E + + LVA Sbjct: 179 TSKSVVAIPELAKEKFIFFPRKMGIGIYDQFIKLCGKWGFAPDIVQEAEEATTIVGLVAA 238 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRD 279 ++ +P + + L +++ L R Sbjct: 239 GLGVAVVPGGL--RYIQIPNLEFRHIADEDAITELLLAFRTG 278 >UniRef50_C6D9U9 Transcriptional regulator, LysR family n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6D9U9_PECCP Length = 294 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 67/296 (22%), Positives = 120/296 (40%), Gaps = 8/296 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ IR F+ VA + A+ LN+ QP LS+ IQ LE L LF R + V LT+A Sbjct: 1 MEFRHIRYFIAVAEELHFTRAAVRLNIGQPPLSQQIQSLEAELGVLLFERTRRSVRLTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGAS-ISRSLMPAVISRFHQQHPQ 123 G+ F A ILE ++++ AG++ I ++ + + + F ++P+ Sbjct: 61 GQHFLIRAREILESSEGVASELQRISRGEAGELKISFTSTGLLVEELRTPLRTFRAKYPE 120 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V++ + E L GELD + T + + + HP G Sbjct: 121 VRLTLKEMFTHLQFAALLAGELDIGCVRFNGPRAPDGLTLRWIRNDRLCLVLPDDHPLAG 180 Query: 184 ARSIK--QLLDYSWTMPT--PHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 + ++ D + S ++ + P V I LVA Sbjct: 181 RTDVGIVEVRDEPFIGYPAKAGASVSDYVTMCCEQAGFIPNVTQEAREAMTQIGLVAAGM 240 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 ++ LP+ M D L +G+ +P+S+ + L+ R +S +P + + R+ Sbjct: 241 GVAILPQPM--DQLQPKGVCFIPLSDAGAQLRMALVTR-ESDNSPRVRNFVDLVRQ 293 >UniRef50_B1Y5W5 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=B1Y5W5_LEPCP Length = 316 Score = 226 bits (577), Expect = 8e-58, Method: Composition-based stats. Identities = 64/288 (22%), Positives = 124/288 (43%), Gaps = 6/288 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 V Q+R F EVAR S A+ L+++ PA++ ++ELE + LF R + V+LT A Sbjct: 4 VTFRQLRVFTEVARHLSFVRAAEALHLTPPAVTMQVKELESAIELPLFDREGRKVSLTTA 63 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE F +A +L L+ A + + + + +G +++GM + ++ +P +++RF +HP + Sbjct: 64 GEYFLVYAKRLLSTLKEADDAMARFRKVESGVLSVGMVGT-AKYFVPQLLARFRIEHPGI 122 Query: 125 KVRIMEG-QLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI- 182 ++++ G ++ L+QGE+D I + P + E PGHP + Sbjct: 123 ELKLQVGANREQLVALLQQGEVDLAI--MGRPPREMATRAEPFAAHPHVFIAPPGHPVLA 180 Query: 183 -GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 G ++ +L Y P + + ++ + + V L Sbjct: 181 QGRTTLSELASYPLIAREPASGTRALMDRFFQEHRVELRIAMEMPSNETIKQAVMAGMGL 240 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASL 289 S L L L ++ V + ++ + +P +L Sbjct: 241 SFLSLHTIGLELRCGLLELVHVENAPIVRTWNIVHMQSRLLSPAAEAL 288 >UniRef50_C1XNG0 Transcriptional regulator, COG0583 n=2 Tax=Meiothermus RepID=C1XNG0_MEIRU Length = 312 Score = 226 bits (577), Expect = 8e-58, Method: Composition-based stats. Identities = 80/291 (27%), Positives = 143/291 (49%), Gaps = 6/291 (2%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 Q+ + Q+ F+ VA GSI A LN++Q ++++I++LEE L A+LF R ++G+ LT Sbjct: 1 MQISLKQLVYFIAVAESGSISKALTSLNVTQSVVTEAIKKLEETLGAELFTRHARGMILT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 AG F +HA +L LR A++ IR+R GQ+N+G+ + ++ +P ++ RF + P Sbjct: 61 HAGHQFLRHAHEVLAALRNAEQAIRERPDATTGQLNLGVTSLVTAYYLPYLLDRFERVFP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 V+V ++E + + + L GELD + LL + ++ HP + Sbjct: 121 GVQVAVVEDRRGYIEHLLINGELDVAVMNVSM-VDKQALETRTLLRAPWRVWLPTNHPLV 179 Query: 183 G--ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 A S++ L + + +++++ + + P+V V ++ A SLVA Sbjct: 180 QQEAVSLENLREERFLYLK--NDELEEVTQQIYRLSGFPRVAVRTDSIEAMRSLVALGIG 237 Query: 241 LSKLPEEMGCD-PLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLI 290 ++ LP M L G L P+ E LP+ + RR S + + Sbjct: 238 VAVLPNLMYRPWSLEGDRLESRPLLENLPRLEIGVAWRRGSALSEAARQFL 288 >UniRef50_B4CXF3 Transcriptional regulator, LysR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXF3_9BACT Length = 309 Score = 226 bits (577), Expect = 8e-58, Method: Composition-based stats. Identities = 68/281 (24%), Positives = 114/281 (40%), Gaps = 5/281 (1%) Query: 15 EVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHASL 74 VAR G+ A+ +SQP+LS+ IQ+LEE L +LF R + LT GE+F + A Sbjct: 26 AVARAGNFTRAAEQCRVSQPSLSQQIQKLEEELGERLFDRMKRQTKLTSYGEAFVRRAVR 85 Query: 75 ILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQLV 134 ILEE A + + L+G + IG+ +I+ L+P IS F +++P V+V + E Sbjct: 86 ILEEAEMALREATDAKSLLSGMLTIGVLPTIAPYLLPEAISAFARKYPGVEVVVQEDTTG 145 Query: 135 SMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARSI--KQLLD 192 ++ L E+DF I + D F ++L ++ + GHP R++ L Sbjct: 146 HLLKHLTTYEIDFAIAS--NPIEDSRFEIQELFAEELLLALPAGHPLARKRTVPASALKG 203 Query: 193 YSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSKLPEEMGCDP 252 + Q+ + + P V +LVA LS +P Sbjct: 204 ERLIVMREGHCLGDQVLGFCEHREMKPTVSFRSAQLETIYALVAAGLGLSLIPAMAAATE 263 Query: 253 LHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 L + + P+ + + + Sbjct: 264 -RANALELRSIQAPRPERKILAVWPKQRPLGRAARVFLDLM 303 >UniRef50_A0AYH9 Transcriptional regulator, LysR family n=148 Tax=Proteobacteria RepID=A0AYH9_BURCH Length = 326 Score = 226 bits (577), Expect = 9e-58, Method: Composition-based stats. Identities = 69/279 (24%), Positives = 128/279 (45%), Gaps = 10/279 (3%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 +++ +R FV VA + + A+ L+++QP LS+ IQ+LEE L LF R ++ + LTD Sbjct: 21 NMELRHLRYFVAVAEERNFTRAAERLHIAQPPLSRQIQQLEEALGVPLFERTARPLKLTD 80 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 AG FY HA +L + E + +R G++ +++G S ++P +I RF ++P Sbjct: 81 AGRFFYSHAVQLLAQTTEL-ESMTKRVGKIERSMSVGFVGSTLYGMLPKIIRRFRSEYPA 139 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V++ + E + I L++G +D D L E++ + GH Sbjct: 140 VELSLHEMSTMDQIKALKEGRIDVGFGRIRHE--DPSVRRVVLREERMIVALPVGHVLDS 197 Query: 184 AR---SIKQLLDYSWTMPT--PHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 A+ S+ L++ + + P SY Q+ D+A P+ + LVA Sbjct: 198 AKPVLSLHDLVNDTLIIFPKAPRPSYADQVLAAFHDRALQPRRIYETRELQIALGLVAMG 257 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQR 277 + +S +P+ + L + P+ + + + R Sbjct: 258 EGVSVVPQSV--YGLKRDDISYKPLDDPNLVSPIIMSMR 294 >UniRef50_B1J4U2 Transcriptional regulator, LysR family n=2 Tax=Pseudomonas putida RepID=B1J4U2_PSEPW Length = 311 Score = 226 bits (576), Expect = 9e-58, Method: Composition-based stats. Identities = 74/293 (25%), Positives = 126/293 (43%), Gaps = 2/293 (0%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 A++V + Q+ FV VA G A+ LN+SQ +S+ +++LE L L R +GVTL Sbjct: 7 AYRVDLKQLECFVRVAEFGGFTRAAATLNLSQSVVSRQVRQLELELGQHLLLRNGRGVTL 66 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T AG ++H IL +++ A+ED+++++ L G++ IG+ SI+R +++ F + Sbjct: 67 TPAGTRLFEHGQGILRQVQVAREDLQEQRDSLTGKVVIGLPPSIARRHTVGIVTAFQKAF 126 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P + I EG SM L G LDF + Y + + FE L + + G Sbjct: 127 PGCSLGIKEGLSHSMREWLLLGRLDFAL--LYNPAQNAQLHFEPLQSEPLWLIGAAGACL 184 Query: 182 IGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 A + L DY +P+ S + + V + + + I LVA Sbjct: 185 APAVPLATLGDYPLIIPSQPHSLRRLIESEAARHHVELNVHMEIDGIPSLIDLVAAGAGF 244 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 + L GL P+ E ++ T L + + + Sbjct: 245 AVLSRMALSGSYVPLGLQSAPIVEPTINTHLFVATTNQRPLTRLASMTLAVVK 297 >UniRef50_A1WHL2 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=A1WHL2_VEREI Length = 305 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 72/293 (24%), Positives = 131/293 (44%), Gaps = 5/293 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + +RAFV VA GS R A++ L++SQPALS+ +++LE+ + +LF R ++ V L+ Sbjct: 1 MNFDLSDMRAFVAVADLGSFRAAAQTLHISQPALSRRVEKLEQAMGFRLFERTTRKVELS 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 G SF A +L EL A + +L GQ+ + S L+ + F ++ P Sbjct: 61 AIGRSFVPKARHVLSELENALLGMTDMSDRLRGQVTVACVPSSVPHLLAGAVEAFQRKFP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 +++VR+++ ++ + + E DF ++ Y G + + F+ L+++ F + C PGHP Sbjct: 121 RIRVRLIDETATEILLAVVRSEADFGVS--YWGAQEPDLEFQGLVQEPFVLACLPGHPLA 178 Query: 183 GARSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 R +K +L + P + + L A P+ A +SL+ Sbjct: 179 RKRRVKWAELAQHDCVTLPPGTGNRMLIDQALSTVAYPPRWTCEARHVPALLSLIEAGVG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 + +P G L + + E +I+RR P + Sbjct: 239 VGAVPRFAIRGG-QGATLASVRLVEPEVTRTIGVIKRRARPLMPAAQAFHDLL 290 >UniRef50_C5SQ96 Transcriptional regulator, LysR family n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SQ96_9CAUL Length = 413 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 75/301 (24%), Positives = 123/301 (40%), Gaps = 2/301 (0%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + Q+RAF+ V R GS A+R L++SQPA+ ++ +ELE L L R + + T Sbjct: 102 RHISSTQLRAFLFVERFGSFSEAARQLSLSQPAIHRATRELELVLGVSLLVRVGQYLRPT 161 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 +GE + L L ELRA +DI +G++ IG +L+P +SRF+ P Sbjct: 162 ASGERLGRDVRLALAELRAGLDDIASLSSVHSGRLTIGTLPLARAALLPQALSRFYAVAP 221 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 ++ ++EG + ++ L+ GE+D I + L E I R GHP Sbjct: 222 GAEIVVLEGPYLEHLSALQGGEIDVIIGALRSTEALSDIRQVSLFEDDLYIVGRKGHPLD 281 Query: 183 GARSIK-QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 G + L Y W + P L + P V C + L+ D+L Sbjct: 282 GQPVVDNALSSYPWVIGAPGAPMRLYWERLFQNT-PRPTQTVQCSSVLTTRGLLLAGDWL 340 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQ 301 + + + L L + + RRD + L A+ + + + Sbjct: 341 ALMSADQFRIEQAAGLLQPLSGRLPGSRRDIGITMRRDWLPSSLQAAFLETLKEVATERR 400 Query: 302 S 302 S Sbjct: 401 S 401 Score = 80.1 bits (197), Expect = 9e-14, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 43/82 (52%) Query: 6 KIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAG 65 + + A EVAR G+I AS +N+SQP L++ I +LE + +LF R S G T T AG Sbjct: 8 NLRHLEAAAEVARLGAISRASAAVNLSQPTLTQGIAKLELQIGHRLFNRESGGCTPTSAG 67 Query: 66 ESFYQHASLILEELRAAQEDIR 87 + F + L + IR Sbjct: 68 QLFIPRVNRALTRIEECCSHIR 89 >UniRef50_B7V886 Probable transcriptional regulator n=7 Tax=Pseudomonas RepID=B7V886_PSEA8 Length = 304 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 4/289 (1%) Query: 14 VEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHAS 73 V + G++ G +R + +QP LSK ++ELEE + A LF R ++G+ T G + + HA Sbjct: 16 VSLMETGNLSGTARAAHTTQPGLSKWLKELEEDVGAPLFERHARGLRPTPYGMTLFNHAQ 75 Query: 74 LILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQL 133 +L E+ A++++ + ++ +G + + SL+P + F ++P +V ++EG + Sbjct: 76 RVLTEMERARQNLEAMRSGSGSRVLLGTSPASAPSLVPRALRAFLGRYPGAQVELLEGTM 135 Query: 134 VSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARSI--KQLL 191 ++ L + +LD + E L + + RPGHP A ++ + + Sbjct: 136 NGLLERLEKRQLDVVVGRLDNYAPRASLRCEVLYSEAIVVMARPGHPLAQAAALDWEDVR 195 Query: 192 DYSWTMPTPHGSYYKQLSELLDDQAQTPQV-GVVCETFSACISLVAKSDFLSKLPEEMGC 250 Y W + P +L L + P + + A I L+ SD LS + Sbjct: 196 RYDWIVWPPGSPIRSKLDMALTQGGRQPPAYRLESSSMLANIELLRGSDMLSIGSARVV- 254 Query: 251 DPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 + L G GLV EI + A + R + + + L+ R Sbjct: 255 EHLAGLGLVARLALEIPGEGAVGMCWRDEPHRDRASEDLLACLREGAAA 303 >UniRef50_C1BAS4 Putative LysR family transcriptional regulator n=2 Tax=Actinomycetales RepID=C1BAS4_RHOOB Length = 299 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 66/291 (22%), Positives = 119/291 (40%), Gaps = 8/291 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+R FV VA + + R A+ L+++QPALS+ I + E+ L LF R ++ V LTDA Sbjct: 1 MELRQLRYFVTVAEEMNFRRAAERLHIAQPALSQQISKFEKELRTTLFERTTRRVELTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +L E A + Q G + IG +S + ++PA + ++ P V Sbjct: 61 GRVLLDEGRRVLAEADHALAAVEQVAHGEVGLLRIGFVSSAALRIVPATVLALQKEWPGV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V + E ++ + G LD I + L + + HP G Sbjct: 121 QVELSESTTDRQLSAIADGILD--IGLVREVDRAEGIVVRPLTREPLLVAMHSSHPFAGR 178 Query: 185 RSIK--QLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 S++ +L D + Y ++ L + F + LVA + Sbjct: 179 ASVRLVELRDERFLTFPRGQVSRLYDHIAALCHHAGFRLEAAQEAVQFPTLLGLVAANTG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLIT 291 ++ +P + LH L + +S+ + + R D +Q P + Sbjct: 239 VTVVPASL--RALHLPDLRYVALSDAQAVSTVSVAYRADRQQIPAIRHFLD 287 >UniRef50_Q1YDL8 Transcriptional regulator, LysR family n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YDL8_MOBAS Length = 302 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 73/292 (25%), Positives = 134/292 (45%), Gaps = 9/292 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 V+ +R+FV VA + A+R L+++QPAL++ IQ+LEE L A L R + VTLT A Sbjct: 2 VETRLLRSFVCVAEELHFGRAARRLHIAQPALTRQIQQLEERLQATLLNRNQRIVTLTPA 61 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G F + + IL +L A +++R+ + G++++G S + + P V+ RF P+V Sbjct: 62 GRMFLERSYRILADLEQAAKEVRRVEAGQEGRLSVGFIHSSTYGVTPLVLRRFRLAFPRV 121 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + + E + + LR G++D I D L E++F + H Sbjct: 122 DLELFEMTIQEQLAALRDGQIDVGI--LRPPISDPSLRARPLREERFVVALPHDHRLAAT 179 Query: 185 RS--IKQLLDYSWTMPTPHGS--YYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 ++ L + + + T S +Y ++ + + P+V I LV+ Sbjct: 180 DRLHLRDLSEDGFILFTQRKSPLFYARIIGMCEKAGFVPRVEQYATQIHTMIGLVSAGMG 239 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQ 292 ++ +PE L+ G+ + +++ P L R S +P+ A+ Sbjct: 240 VAIVPE--VARSLNIPGVAYVEIADTPPTVQVCLGWRA-SDTSPILAAFCDH 288 >UniRef50_A6UB72 Transcriptional regulator, LysR family n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UB72_SINMW Length = 326 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 77/291 (26%), Positives = 140/291 (48%), Gaps = 10/291 (3%) Query: 2 AFQVKI-HQ---IRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSK 57 F + + +R+F+ VAR+G++ A+ L +SQPAL++SI+ LE+ +LF R ++ Sbjct: 12 GFVMDLFRHVGLLRSFLMVAREGNVTAAAEKLGISQPALTRSIRRLEDETGFRLFDRHTR 71 Query: 58 GVTLTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRF 117 GVT T G++ +HA LI E R A ++ + GQI IG G +L+P ++R Sbjct: 72 GVTPTIYGKALLRHAQLIDTECRFASSELEALRSGHRGQIKIGGGPFWGAALLPRAVARL 131 Query: 118 HQQHPQVKVRIMEGQLVSMINELRQGELDFTINTYYQG--PYDHEFTFEKLLEKQFAIFC 175 H P+++V + G + +L GELD ++ + + F F ++ + +F Sbjct: 132 HSLLPKLQVNLQIGVNNVLHPKLLDGELDLVVSAAPRDLSQFPEHFRFTRITTIRSQMFV 191 Query: 176 RPGHPAIGARSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQ-TPQVGVVCETFSACI 232 R GHP + I+ L +Y W M ++++ LL D P++ + + A + Sbjct: 192 REGHPILAQERIRYEDLANYPWIMYQQDPEIIERVATLLKDLGVNPPRIAIKASSLMAVL 251 Query: 233 SLVAKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQT 283 L+ DFL+ L + + G+ +P+ + + R Q+ Sbjct: 252 ELLRSGDFLACLAAPILGV-VQDVGIRPVPIDREIWSFPAGITYHRAIEQS 301 >UniRef50_B9TDR3 HTH-type transcriptional regulator xapR, putative n=1 Tax=Ricinus communis RepID=B9TDR3_RICCO Length = 301 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 118/298 (39%), Gaps = 10/298 (3%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + + Q++ F+ VA + S A+ L++SQP LS+ I +LE L +LF R ++ LT Sbjct: 1 MSIDLKQLKYFLAVAEEKSFSRAAERLHISQPPLSQQIMKLESELGVKLFARTTRTFELT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 AG++ A+ +L +R + IRQ G++ +G+ S +P+++ F + P Sbjct: 61 VAGKALMSEAADLLARMRMTIDTIRQIDRGEVGRLRVGIVGSAMWGPIPSLLEEFQTKFP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYD----HEFTFEKLLEKQFAIFCRPG 178 +V + E LR ++D + D E + + Sbjct: 121 RVTWTLHEMGPTLQYEALRAKQVDVGFWREPRIDDDVLKNDNLRQELCFREDVCVAINEH 180 Query: 179 HPAIGARSIK--QLLDYS-WTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLV 235 HP +I+ + + T+ S+ + L + P + +++V Sbjct: 181 HPLAKQEAIELMDIAEEPMLTLALDKSSFPRYLMQCCVQAGFQPTIAQEATEPQTLLAMV 240 Query: 236 AKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 ++ +PE + G+V +P+ P A Y+ P+ + + Sbjct: 241 GAGLGVALMPE--TTSRIGWPGVVFVPIRSNPPSANLYITYTTQDD-APVVRAFLNIL 295 >UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67NJ1_SYMTH Length = 311 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 63/294 (21%), Positives = 123/294 (41%), Gaps = 5/294 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + + F V +GS A+++LN++QP+++K + LE+ L QLF R+ K V LT Sbjct: 11 MLLQHLTTFCRVVEEGSFTRAAQVLNLTQPSVTKQVGALEDYLQVQLFTRQGKRVHLTPV 70 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE Y +A ++ ++ +E +R+ + +G + +G +I +P +++ + ++HP+V Sbjct: 71 GELVYDYARQVIHLVQRCEEAVREYRSPGSGSVTVGCVHTIGLFTLPELLAAYVREHPRV 130 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP--AI 182 K+ + G + L GE+D + T L E + P Sbjct: 131 KINVKTGNNRETVTMLLHGEVDVGLVTT--PQVHERIEVVPLFEDPLVVVAGPSFAADLP 188 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 S L + + ++L++ PQ + + A ++VA ++ Sbjct: 189 PVVSNADLAQLPFIGYVRGARFRMTTDQVLEEMGIQPQFVMEFDNHEAIKTMVALGFGIA 248 Query: 243 KLPEEMGCDPLHGQGLVMLPVSE-ILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 P L LV L V LI RR R++ + ++ + Sbjct: 249 LEPVSAVQRELISGQLVRLNVPGLPRLSRTTSLILRRGERRSEAVRAFLSLLEQ 302 >UniRef50_A0JW92 Transcriptional regulator, LysR family n=3 Tax=Micrococcaceae RepID=A0JW92_ARTS2 Length = 306 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 117/292 (40%), Gaps = 9/292 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ ++ F+ VA + A+ L+M+QP LS+ I++LEE L L R ++ V LT A Sbjct: 1 METRHLKYFIAVAEERHFGRAAARLHMAQPPLSQQIRQLEEQLGTPLMVRTTRKVELTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ ++L+EL+ + D++Q G + +G + + LMP ++ + P + Sbjct: 61 GQVLLDRGRVLLQELQVLESDVQQVGEGATGVLRVGFTGTATYRLMPIIVQAARRTLPGL 120 Query: 125 KVRIM-EGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI- 182 ++ + E M L +G LD + + + L + Q P Sbjct: 121 RITVQGEMLTPQMEAALEEGRLDAAV--LRPPVHSGAIALKLLEQDQLVAALPADSPLAE 178 Query: 183 -GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 G + L + + + + + P+V + S +SLVA + Sbjct: 179 KGTLELAALSEEGFIGYPGYSAVSSIFVDACRKAGFQPRVVQEAKETSTLLSLVASGMGI 238 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 + +P M QG+ P+ P + D TPL + + F Sbjct: 239 ALVP--MTSRMFSYQGVAFRPLRNPPPM-DLAVAWNSDKE-TPLLRAFLDLF 286 >UniRef50_Q7W708 Putative LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W708_BORPA Length = 298 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 63/277 (22%), Positives = 120/277 (43%), Gaps = 8/277 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + Q+R FV VA + S A+ L++SQP LS+ I+ LEE L A LF R +G++LT A Sbjct: 1 MDLKQMRYFVAVAEERSFSRAAERLHISQPPLSQQIKALEEELNAPLFHRLPRGISLTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + + + IL +R A ++ Q + G + +G +S L+P ++++ + P Sbjct: 61 GAALLKSSRAILANVRLAAQETTQIAAGMLGTVRMGTVSSALAHLVPYILTQVKRSMPGS 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 KV + E + + ELD I + + ++L + F HP Sbjct: 121 KVELTEMSSREQTLAVLRDELD--IGLVHTPIDTADLRTRQILREPFYAAVPSQHPLASR 178 Query: 185 RS--IKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + + +L + + ++ L + +P++ S + +VA Sbjct: 179 EAVPVAELASEEFVFFPRTLASGLFDKMVSLCMNAGFSPKIHHTARHQSTMLQMVAMGLG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQR 277 ++ +P + ++ V LP++ LI R Sbjct: 239 VTIVPRSL--QRIYKGSAVFLPLTGTPHYLELSLIWR 273 >UniRef50_Q129P4 Transcriptional regulator, LysR family n=17 Tax=Burkholderiales RepID=Q129P4_POLSJ Length = 339 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 67/300 (22%), Positives = 128/300 (42%), Gaps = 4/300 (1%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 + ++++ Q+ + V G++R AS L M+QPA +K IQELE L +LF R +G Sbjct: 33 LLNRLRMRQVALILAVGEHGTLRKASAELGMTQPAATKMIQELESALGQRLFERVGRGQK 92 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT AG S + + + + ++ + Q +G+++IG + S +L+ I + Sbjct: 93 LTAAGTSVLGYFRGMRGSMESMTRELAELQLGSSGRLSIGTIMAPSPTLLTNAIIALKKA 152 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 +P + V I ++ LR+G LD I + +++F L + ++ HP Sbjct: 153 YPLLSVGITMDTSDRLLELLREGALDVAIGRMRDEHW-QDYSFASLDNEALSVVVGAHHP 211 Query: 181 AIGARSIK--QLLDYSWTMPTPHGSYYKQLSELLDD-QAQTPQVGVVCETFSACISLVAK 237 +S+K LLDY W + + L + Q P+ + + L+ K Sbjct: 212 LGHKKSVKFASLLDYPWILQPTGSPMREVLDQEFRMLQMPAPRSLIETASILTTTDLIDK 271 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 +D ++ +P + L +LP ++ I R+D + + + Sbjct: 272 TDMIAVMPRSIADTYAQHGLLKVLPCEIRHKMESFGSITRKDRPLSEAARFFLGALHQRA 331 >UniRef50_A4FE82 LysR-family transcriptional regulator n=5 Tax=Actinomycetales RepID=A4FE82_SACEN Length = 294 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 122/294 (41%), Gaps = 8/294 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+ FV VA + A++ L+++Q LS SI+ LE L A+LF R ++ VTLT A Sbjct: 1 MELRQLEYFVAVAEECHFTRAAKRLHVAQSGLSASIRSLERELGARLFHRTTRNVTLTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + A L + +A++ + +G L G+++IG + +P V++ F HP + Sbjct: 61 GHALLHEARRALCAVDSARDAVAAVRGLLRGELSIGTLQCLHVVDLPPVLAGFVTAHPGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +VR+ +G + ++R G LD L + + C HP Sbjct: 121 EVRLRQGGSGDLAEQVRAGRLDLAFA-VRPARCPDGVLVHSLDTEPLVLACAGDHPMAER 179 Query: 185 RSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + ++L + + P + +L + +V + + + LVA ++ Sbjct: 180 DRVDPRELGEQPFVDFHPDWGTRDVVDRVLAETGVERRVALEVTDVHSLLELVACGLGIA 239 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 +P + +P++ P I + A+L+ + Sbjct: 240 LVPRSFSA---KNGQVRFVPLASPAPTWETVAIT--SDPTSTAAAALLRDVQEA 288 >UniRef50_D1TFB5 Transcriptional regulator-like protein n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TFB5_9BURK Length = 447 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 84/294 (28%), Positives = 136/294 (46%), Gaps = 1/294 (0%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M +K+HQ+ A V +A GS+R A+ +L ++ A++K++++L+E L L G+ Sbjct: 128 MRESIKLHQLVALVAIADTGSVRSAAAILGVTAQAVAKNLRQLQESLRMPLVLHTPAGIV 187 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LTD G QHA LI+ + A +DI +GQ G+++ G+ + + +P + RF Q Sbjct: 188 LTDGGRMLLQHARLIVGQTSRALDDIDTLRGQPRGRLSFGLPPWMVMAFLPDTMKRFEQT 247 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P V + +G LV + LR G +DF I EF F LL + R GHP Sbjct: 248 LPGVALETFDGYLVLGLPRLRDGSIDFLIGRPTPEDLGAEFNFRPLLVAGNGVVARQGHP 307 Query: 181 AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLVAKSD 239 A G S+ LLDY W + G + + +P+ + +A I L+ SD Sbjct: 308 AAGKHSLADLLDYGWLLSRDPGREAHLPANIFTRHGLPSPRALHYVHSLAAVIYLLQHSD 367 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 LS P + Q L ++PV E + + ++ Q+ + I Sbjct: 368 RLSIFPWPLIELCSRRQNLCVIPVQEEIEEQTIGIVTLAGRPQSVASTCFIGYL 421 >UniRef50_Q28M96 Transcriptional regulator, LysR family n=3 Tax=Rhodobacteraceae RepID=Q28M96_JANSC Length = 297 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 70/296 (23%), Positives = 118/296 (39%), Gaps = 9/296 (3%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + + QIR FV A + R A+ L ++QPALS++IQ LE L LF R ++ V +T Sbjct: 1 MRSDLRQIRYFVATAEELHFRRAADRLGIAQPALSRAIQALEAELDVALFVRTNRSVQIT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 AG F A IL E+ R G + IG +P+++ F ++HP Sbjct: 61 TAGRVFLDGAREILTLTERMLEETRTAHDGRMGALRIGYTDFAIAGELPSLLKHFQERHP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 +V ++ G + I L +G+LD T F + + HP Sbjct: 121 RVTLKPQHGVTQTQIRLLEEGKLDLGFVT--GPIVRDGFDQRVVQSEALQAVVPDSHPFA 178 Query: 183 GAR--SIKQLLDYSWTMPTPHG--SYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 G SI L + + + +Y L + +P++ + + LV+ Sbjct: 179 GRATLSIADLAEEDFVHGSSRDWQHFYDYLLPMCRRAGFSPRIVQEAFNTAGILGLVSCG 238 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 ++ L E + G GLV +P+++ + I R+D P + Sbjct: 239 MGVTVLTERVCSAL--GPGLVAIPITDADERLVTSAIWRKDHLSGPA-RHFVEDLC 291 >UniRef50_Q2G7Q5 Transcriptional regulator, LysR family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G7Q5_NOVAD Length = 318 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 74/293 (25%), Positives = 141/293 (48%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 + Q+RAF+ +A GS+ A+R++N++QP+LS+ +Q +EE L +LF R KG+ Sbjct: 19 LRMDFDERQLRAFIAIADTGSLGRAARVVNLTQPSLSRLVQGIEERLGHRLFDRGGKGMA 78 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LTDAG HA ++ E++ ++++ +G G + IG A++ R+L+ + I + Sbjct: 79 LTDAGRLLLPHARHLVAEMQNTRDELAALRGLRRGTVRIGAVAAVLRTLVASAIGSVLVE 138 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P + ++EG +++ L +D +++ + E FA+FC H Sbjct: 139 TPDLAFELVEGVDGELLDALLTRRIDLAVSSQPLDHDEVVPIGECTYRDSFAVFCAASHT 198 Query: 181 AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 ++ Q + W MP + E++ + TP+V V C + A I++ A S+ Sbjct: 199 LPPRPTLAQAMTRGWVMPGHAFTPRGTFEEIVRRHSLTPRVVVECGSVEAMIAVSASSEL 258 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 L LPE + L + L ++E+ + + L +R+ + + F Sbjct: 259 LCWLPEPLLAPHLASGAMRKLDIAELALQRRFILHRRKSGLLPDAASQFVRHF 311 >UniRef50_A1TN88 Transcriptional regulator, LysR family n=9 Tax=Burkholderiales RepID=A1TN88_ACIAC Length = 307 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 73/293 (24%), Positives = 126/293 (43%), Gaps = 9/293 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R F +A + A+ LNMSQP LS +I++LEE + AQLF R K V LT A Sbjct: 1 MELRHLRYFAVLADELHFGRAAARLNMSQPPLSVAIRQLEERVGAQLFERTPKEVRLTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + A +L + A + R LAG++ IG ++ +P + F Q+HP V Sbjct: 61 GRALKASARRVLAQAEEALSEARGVAAGLAGRLRIGFVGAMLYRGLPQALGVFQQRHPGV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V + E I EL LD + P L+ + F GH Sbjct: 121 RVSLQELNSGEQIGELLHDRLDLGFVHTSRMPAT--LQQRLLVTEPFLCCLPAGHRLARR 178 Query: 185 R--SIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + ++ L + + Y+ ++ + P++G + A +SLV++ Sbjct: 179 KVIDLRDLAGEPFVLFARAVSPDYHARILSICASAGFQPEIGHEVRHWLAVVSLVSQGLG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 ++ +P+ M L G V PV + ++ Y + + + PL L+ Sbjct: 239 VALVPQAMEHSRLPGA--VFRPVGPAVAQSEAYAVWPA-APENPLVGDLMAIL 288 >UniRef50_A1B7R5 Transcriptional regulator, LysR family n=10 Tax=Rhodobacteraceae RepID=A1B7R5_PARDP Length = 330 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 73/296 (24%), Positives = 130/296 (43%), Gaps = 1/296 (0%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M ++++ ++AFVE+ RQG+++ A+ L ++QPA+S++I ELEE + A+L R +GV Sbjct: 1 MERRIRLRHVQAFVEIVRQGNLKRAAEALYLTQPAISRTIAELEEIVGARLMTRSRRGVA 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT GE F+ +A L L I + +G S+ LMP V++ Q Sbjct: 61 LTAQGEFFHGYALNALSALSQGLAGISGEVQAAELSLRVGALPSVLARLMPEVVAELQQT 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P +++ I +G ++ LR +LD I +F +L + A+ RPGHP Sbjct: 121 APHLRLSIADGGHGHLMGLLRSDDLDVVIGRLGAPETMQGLSFTQLYLEDVAVVVRPGHP 180 Query: 181 AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQA-QTPQVGVVCETFSACISLVAKSD 239 + ++++ DY PT + + + LL P + + + + D Sbjct: 181 ILSDPDLRRIGDYPVIYPTETAAIHPFVERLLIAHGILRPARRIETVSDAFGRVFTRQGD 240 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 + + + + LV LP+ L + L+ R +T R Sbjct: 241 AVWFISAGVVAREIAEGRLVRLPLDTTLTQGPVGLMTRASQPETNAQLLFRQAVMR 296 >UniRef50_Q1YUG7 Transcriptional regulator n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YUG7_9GAMM Length = 383 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 78/296 (26%), Positives = 128/296 (43%), Gaps = 6/296 (2%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 V QI+AF+ +A+ G+ AS +S +L ++I++LE L L R+ +G+ LTD Sbjct: 84 NVTHTQIKAFLALAQCGNFAEASNSTGLSSASLHRAIRDLEIFLKQDLTRRKGRGLALTD 143 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 G++ + SL ELR D+ +G +G I IG ++PA + F HP Sbjct: 144 FGQTQARRFSLAGAELRYMINDLMALKGIASGSIVIGAMPLCRARVLPAAVVEFQASHPN 203 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA-- 181 V +RI EG +I L G+LDF I + D L E + R GHP Sbjct: 204 VDIRISEGSFTELIEPLLSGQLDFMIGALREHGSDPGLVHTPLFEDAPVVVARTGHPLFD 263 Query: 182 ---IGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAK 237 ++++L ++ W +P + ++ L + P++ V C + ++ K Sbjct: 264 RLEAAQATVRELAEFPWCVPHSNSPLREKWEALFTAEGLPVPRISVECGSVIVNRQILLK 323 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 +D L+ L + L L +L L + R+D R T S I Sbjct: 324 TDCLTILSPDQVAVELEAGWLSVLCSLPPLMNRKIGVTYRQDWRPTSSHESFIEIL 379 Score = 85.8 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 44/75 (58%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 ++ I +RAF++ G+ A+R +N+SQPA++++I +LE+ L LF R+S G+ T Sbjct: 4 WRFNIRHLRAFLKTVEMGTSTAAARAVNLSQPAVTQAIAKLEDQLDFALFDRQSGGLVPT 63 Query: 63 DAGESFYQHASLILE 77 DA + Y L Sbjct: 64 DAAKLIYPRIVETLN 78 >UniRef50_B1YXM2 Transcriptional regulator, LysR family n=3 Tax=Burkholderia cepacia complex RepID=B1YXM2_BURA4 Length = 302 Score = 224 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 65/294 (22%), Positives = 125/294 (42%), Gaps = 3/294 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + AF EVAR GSI + L++SQPA+++ ++ELE+ L LF R +GV LT+ Sbjct: 1 MNFTHLLAFYEVARAGSISAGAERLHVSQPAVTREVRELEDRLGIVLFDRMPRGVALTEG 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ Y++AS I A++++ + G +G + IG ++ +P I+ F+ +HP+V Sbjct: 61 GKLLYEYASRIFTLADTAEKELAELAGLGSGHMKIGASGTLGVFFVPEAIAAFNARHPRV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + + + L +L FTI D ++ + A+ GHP G Sbjct: 121 AIDLTVTNTERVEAGLH--DLSFTIGFIEGPFDDSILHARRIGSDEIAVVAAAGHPLAGT 178 Query: 185 R-SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSK 243 + + L+D + M P + E + + A ++ L+ Sbjct: 179 KVRARDLVDRTVIMREPGSGTRAIIEESYRRAGLEIEPLMSVSHTEAIKRMLLSQHALAY 238 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 + D L L ++ V ++ +++ + +P + +L Sbjct: 239 ISTLSVADELRRGELAIVEVEDMRIVRPLHMVWAKGRSLSPSSQALFDLVASGA 292 >UniRef50_C1DSG7 Transcriptional regulator, LysR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DSG7_AZOVD Length = 299 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 80/295 (27%), Positives = 130/295 (44%), Gaps = 6/295 (2%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M + Q+RAF+ +A S S L++SQPALS SI++LE+ L +L R ++ V Sbjct: 1 MLMDISFRQLRAFILIAETSSFTRTSEQLHLSQPALSYSIRKLEDALGLRLLARNTRSVE 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT AGE F A +L ++ A D + + G I +G + + S +P VI+ F + Sbjct: 61 LTPAGEHFLPQARRMLRDMDDAIRDAHEALNLIRGTIRLGALPTAAASFLPGVIAAFGRD 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 HP VK+ + +G+ + ++ GE+D I + + FE LL+ + R Sbjct: 121 HPGVKISLRDGRAGEVKAWVQNGEVDAGITSLPED--LSGLGFEPLLDDNLVLLVRQEGA 178 Query: 181 AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + + K L + T S E L T Q S +LV + Sbjct: 179 SKEPDTWKTL---PYIALTADTSIRPLADEALRHLGVTTQPAWEVAHMSTAAALVREGIG 235 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 S LP G L +LP+ + + + L+QR+ QTP + ++ R Sbjct: 236 FSLLPASCTTFLHIGADLSVLPIEQP-TRRSLGLLQRKPIGQTPSMKAFLSHLNR 289 >UniRef50_Q7WNC1 LysR-family transcriptional regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WNC1_BORBR Length = 297 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 66/294 (22%), Positives = 126/294 (42%), Gaps = 9/294 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + + FV +A + + A+ ++ Q LS++I+ LE L L R ++ V LT A Sbjct: 1 MNLRHVHYFVTLAEELNFTRAAARCHIEQAPLSRAIKALERELGLTLLIRNTRNVELTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G F A + LEEL R+ Q GQ+ I S L+P++I F + +P V Sbjct: 61 GRLFCDCARVALEELELGARRARRAQEGAIGQLTIAHVGSTVYELLPSIIRAFKRGYPLV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +RI + I L G++D + P + +L + F HP G Sbjct: 121 DLRIRQLTTREQIPGLIAGDID--VGFVRVAPDSGQLAAARLYAEPFVCAIPDWHPLAGR 178 Query: 185 RSIK--QLLDYSWT--MPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 S+ +L + M +P S ++Q+ +L P++ E + + LVA Sbjct: 179 ESVALGELASSPFIMLMRSPAPSLHQQVLDLCRKAGFEPRIAQEVEQIESTVGLVASGIG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 ++ +P + L + + +P+ ++ + ++ R+ +P+ + + R Sbjct: 239 VALVPASL--RKLSIRSVCYVPLCDVAEQVEVWVAWPREQA-SPVAQAFLQCAR 289 >UniRef50_C4L1Y9 Transcriptional regulator, LysR family n=2 Tax=Exiguobacterium RepID=C4L1Y9_EXISA Length = 294 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 123/294 (41%), Gaps = 7/294 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ +++ F+ VAR S A+ L+++QP LSK+I+ LE+ L +LF R+ + + LTD Sbjct: 1 MEFREMQYFIAVARAKSFTRAAEALHVTQPTLSKTIRHLEQELGVELFDRQRRQIELTDV 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+ + L++ +L + G I +G+ I ++ FH +P + Sbjct: 61 GEALMLESELLIRQLEDLPNHVFDITNSKRGLIRLGLPPLIGSLFFTKFLTVFHSSYPNI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V I E ++ + L +GELD P F + ++ + HP Sbjct: 121 RVEITEAGGHTLEHALEKGELDVIATVL---PTSSTFEETPFVTEELYAYLPERHPLASR 177 Query: 185 RS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + +++L + + T S + + + TP++ + VA+ + ++ Sbjct: 178 KQLLLEELASEPFVLFTDEFSLHHVVRTACEQAGFTPRLIGESGQWDFLCMSVAQGNAVT 237 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 LP + ++ G+ + + + +P L + T I E Sbjct: 238 ILPRSIM-QEMNIYGVKAILLKQRIP-WQLGLATAKGRYLPYATREFIRYLTEE 289 >UniRef50_D1XD01 Transcriptional regulator, LysR family n=1 Tax=Streptomyces sp. ACTE RepID=D1XD01_9ACTO Length = 337 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 77/300 (25%), Positives = 135/300 (45%), Gaps = 7/300 (2%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++K + ++RQG++ GA+ L+++QPA ++S+ ELE+ L LF RR +GVT T Sbjct: 10 RLKFRHLILVDALSRQGTVVGAAAELHVTQPAATRSLHELEDILGVPLFERRPRGVTATI 69 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 GE+F QHA +L +L A + + G + +G + S L+P I+ ++ P Sbjct: 70 FGEAFTQHARAVLAQLTQAGRHVTELADADRGTVVVGTHLAGSNVLLPRAIAGIKRKRPY 129 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 + V + E +++ EL G +DF + P D KL ++ + R GHP +G Sbjct: 130 LTVVVREASPEALLLELEAGRVDFVVGRLT-APSDERMVRRKLYDESVELVVRAGHPLVG 188 Query: 184 AR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAKSDF 240 + + +L+D W +P +++ E P V +F L+ ++D Sbjct: 189 QQHVELAELVDLPWILPGAATVLRREIEEFFSRHGLALPPNRVETTSFLTVRQLLLETDV 248 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 ++ LP + D LV L V + L +P +LI G + Sbjct: 249 VAVLPSLIIRDDT---RLVGLRVPLDPIGHSVGLTMSAARTLSPSAQALIKSLEDIAGDM 305 >UniRef50_Q47141 Hca operon transcriptional activator n=46 Tax=Gammaproteobacteria RepID=HCAR_ECOLI Length = 296 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 68/302 (22%), Positives = 125/302 (41%), Gaps = 10/302 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R FV VA+ + A+ L+ SQP+LS I++LE + L R + V LT A Sbjct: 1 MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVGVPLLVRDKRKVALTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE F Q A ILE+ A+ R+ + Q+ IG S +L+P V+ F + P Sbjct: 61 GECFLQDALAILEQAENAKLRARKIVQEDR-QLTIGFVPSAEVNLLPKVLPMFRLRQPDT 119 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + ++ ++R+GELD + Y E + +L ++ + HP Sbjct: 120 LIELVSLITTQQEEKIRRGELD--VGLMRHPVYSPEIDYLELFDEPLVVVLPVDHPLAHE 177 Query: 185 RSI--KQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + I QL ++ P GS + + P + V ++LV Sbjct: 178 KEITAAQLDGVNFVSTDPVYSGSLAPIVKAWFAQENSQPNIVQVATNILVTMNLVGMGLG 237 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 ++ +P M + + +V P++ +P A + ++ P I + + Sbjct: 238 VTLIPGYM--NNFNTGQVVFRPIAGNVPSIALLMAWKKG-EMKPALRDFIAIVQERLASV 294 Query: 301 QS 302 + Sbjct: 295 TA 296 >UniRef50_A1WHM4 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WHM4_VEREI Length = 481 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 70/296 (23%), Positives = 132/296 (44%), Gaps = 4/296 (1%) Query: 10 IRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFY 69 + + + VA GS A L SQP + +++ +LE + LF R +G LT++GE+ Sbjct: 148 LASLIAVADMGSGPRAGECLGCSQPTIHRNLLKLEYLVGVSLFQRTPRGTRLTESGEALL 207 Query: 70 QHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIM 129 + L E+ A++++ G+L G++ + S L+P I R +HP++ V ++ Sbjct: 208 RGVKLAFAEIAIAEDELAAFGGRLQGRVVVAALPLSSAFLLPRAIDRLLSKHPRLNVTVV 267 Query: 130 EGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI---GARS 186 +G +++ LR ++D + E E L + + R HP + AR Sbjct: 268 DGTYDALVQMLRCADVDMIVGALRLNSPPSEIAQEMLFDDGLTVIARAQHPCLLTQTARG 327 Query: 187 IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAKSDFLSKLP 245 +++L+ Y W +P P+ + P+ + + S +L+ +SD L+ L Sbjct: 328 LRELVRYPWIVPLPNTPARAAFEHAFRIEGVACPEAQLQVNSPSVVRNLLLESDRLALLS 387 Query: 246 EEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQ 301 L LV +P++ A + RR+ +P +A L+ + R LQ Sbjct: 388 PLQVDAELRTGQLVQVPLALRDASRAIGVATRRNGSLSPGSAGLLDELRVLAATLQ 443 Score = 97.8 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 2/116 (1%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 + +VK+ +RA V V QG++ A+ +L++SQPA+++++Q++E GL LF R ++G+ Sbjct: 38 SLRVKLRGLRAIVAVVDQGAVGKAAEVLHLSQPAVTRALQDIEAGLGFPLFDRTARGMLP 97 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRF 117 T AG A EEL G +I+ S + P ++ Sbjct: 98 TAAGRILGTRARRAFEELAKGCSRAIALVGSAQCEISRAARFSAAVG--PQALASL 151 >UniRef50_Q4KGI4 Transcriptional regulator, LysR family n=8 Tax=Bacteria RepID=Q4KGI4_PSEF5 Length = 306 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 65/284 (22%), Positives = 124/284 (43%), Gaps = 3/284 (1%) Query: 18 RQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHASLILE 77 GS+R A+ + M+QPA +K + E E+ L +LF R +G+ T GE+ +A ++ Sbjct: 19 EFGSLRRAADNIGMTQPAATKMLHEAEDLLGVELFERLPRGMRPTPFGETVIYYAQMVFA 78 Query: 78 ELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQLVSMI 137 EL +E++ + G++ +G +++ L+ I+ Q HP++ + I ++ Sbjct: 79 ELSGMREELVALESGNLGRVAVGAIPALASGLLTRTIATLKQSHPRLSMSIQVDTSDVLV 138 Query: 138 NELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGAR--SIKQLLDYSW 195 L Q +LD + G E F+ L E+ + +P A S QL + +W Sbjct: 139 QALLQDQLDIVLGRIPGGARAEELLFDSLGEEALCVIAGVQNPLAQATHLSWAQLQNETW 198 Query: 196 TMPTPHGSYYKQLSELL-DDQAQTPQVGVVCETFSACISLVAKSDFLSKLPEEMGCDPLH 254 + ++++ + + P V + +SLV ++D + P + D Sbjct: 199 VLQQHPSPMRSIINQVFHNARVDIPSSIVETTSIMTLLSLVQQTDMIGVTPVSVVEDYPG 258 Query: 255 GQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 L +LP+ + LI RR Q+ + + R+E G Sbjct: 259 RHLLAVLPIQFEARLPPFGLITRRHRIQSSAMQAFMNSVRKEHG 302 >UniRef50_UPI000174499E transcriptional regulatory protein, LysR family n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174499E Length = 302 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 67/288 (23%), Positives = 116/288 (40%), Gaps = 3/288 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + Q+RAF +AR+GS A R L+++Q A+S +I+ LEE L LF R+ K V LT Sbjct: 6 LDSRQLRAFTVLAREGSFTQAGRALHLTQSAISHAIRALEEDLGCMLFHRQGKRVLLTHH 65 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +HA I ++ A+ + GQI IG + S+ ++P V+ F P Sbjct: 66 GRELLRHAEEIQRQMALARASLGALDQNPRGQIRIGSTPAASQFILPTVLREFKDSFPLY 125 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + I+ G+ + L QG LD + + L E + P HP Sbjct: 126 SISIVPGETPDTLQRLEQGVLDLAVC--LRPRDVARVDCRPLFEDELIFLASPLHPWAQQ 183 Query: 185 -RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSK 243 K L ++ + + + S ++ + E P+ + A LV ++ Sbjct: 184 HPKTKDLAGETYIISSRNSSTFEMIGEYFLKLGVRPKSFIELGNTEAIKELVKLGLGVAM 243 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLIT 291 + + LV LP+ K + + + + + +T Sbjct: 244 VAAWTAPAEIKSGELVSLPLVRSRIKRQWVVAHMKQKPVSLAEQTFMT 291 >UniRef50_A0R3Z8 Transcriptional regulator, LysR family protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0R3Z8_MYCS2 Length = 289 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 64/277 (23%), Positives = 117/277 (42%), Gaps = 8/277 (2%) Query: 7 IHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGE 66 + +R FV +A + A++ L+++QPALS+ IQ +E L AQLF R + V+LT+AG+ Sbjct: 1 MRHLRCFVVLAEELHFGRAAQRLHVAQPALSQLIQRVERELGAQLFLRTRRTVSLTEAGQ 60 Query: 67 SFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKV 126 + A IL + + +R G + IG S + ++P +++ + HP V + Sbjct: 61 TLLPEARRILRDADRVTQAVRAVHRGETGSVTIGFVGSAADDVLPRLVAAHRRHHPGVSI 120 Query: 127 RIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARS 186 R+ EG + LR + + D + L + + H GA S Sbjct: 121 RLEEGTTAQQLEWLRDQRITVGLGRT--PIDDPAVSTVVLARESLVLAVPDSHALSGAES 178 Query: 187 --IKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + L + + M H Y + TP V + LV+ ++ Sbjct: 179 AELAGLAEEPFIMFPRHLGPGLYDIIHSACAAAGFTPSVVYETVRMQTIVGLVSGGLGVA 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRD 279 +PE + L +G+ + +++ P ++ R D Sbjct: 239 LVPESV--RNLGRKGVRYVHLADAPPAIELSMMWRND 273 >UniRef50_A9WDF5 LysR substrate-binding n=3 Tax=Chloroflexus RepID=A9WDF5_CHLAA Length = 298 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 67/297 (22%), Positives = 121/297 (40%), Gaps = 2/297 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + ++++ F V GS+ A+ L+M+Q +S+ I+ LE+ L +LF R +GV LT A Sbjct: 2 LDLYKLDIFTRVVAAGSLSKAAEQLHMTQSGVSQHIRALEDSLGTELFVRGRRGVELTPA 61 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ + I + A+ + G GQ+ IG+ +S L+P + F Q++P + Sbjct: 62 GQRLLAYCEGIFRLVAEAELAVTDVAGLRDGQLTIGVTPGVSAYLLPEWVQMFRQRYPNL 121 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 V G S++NELR G LD + + + L E + HP G Sbjct: 122 AVSAQTGTTPSIVNELRNGSLDLGAIEGELDSAERDLQQQALREFDQYVVVGRRHPWWGR 181 Query: 185 RS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 +++L M L L +Q+ TP++ + + +V L+ Sbjct: 182 SEVHLQELAGQPMVMRQSSSQTRVWLDHALREQSLTPRIIAELDNLESIKRMVMIGTGLT 241 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 LP L +P++ + L+ R +P+ + G+ Sbjct: 242 ILPLYAVTAEQEVGALHPIPIAGRPLRRTLRLLWRATRPLSPVAYAFRQLLIAHYGH 298 >UniRef50_C8WV81 Transcriptional regulator, LysR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WV81_ALIAD Length = 305 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 66/287 (22%), Positives = 119/287 (41%), Gaps = 3/287 (1%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 +V + Q+R FV V + S A+ L++SQPA+S+ +Q LE+ L +L R + + + Sbjct: 3 RVDL-QLRVFVTVVEENSFTRAAEKLHISQPAISQHVQTLEQRLGVRLIDRGRRRLQVNP 61 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 AG Y+HA IL R + I Q AG +++G + ++P VI+RF + +P Sbjct: 62 AGRIVYEHAKEILALYRRMERLIADMQEMPAGPVHVGASLTYGEYVLPHVIARFRKAYPA 121 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V+ + ++ + + +LD I Q + E E + + P P Sbjct: 122 VQPSVSIANTQTIAHAVAVRQLDIGIV-EGQDVVEDEVVLTPFAEDEMLVVASPASPWYA 180 Query: 184 ARSIKQLLD-YSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + LL+ +W + P + L P+ V + VA L+ Sbjct: 181 EAPDRSLLERATWFIREPGSGTREMTDRLFTQLGIQPRDLVEYTSSQVIKESVAAGLGLA 240 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASL 289 L + L L LP+ K + ++ + + +T + L Sbjct: 241 CLSRWVVARELAWGMLRTLPIPCAPVKRTFSIVTPKSAFETKASKLL 287 >UniRef50_A9F7Y4 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F7Y4_SORC5 Length = 327 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 63/295 (21%), Positives = 121/295 (41%), Gaps = 11/295 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + +R F VA + A++ L ++QP LS+ IQ+LE L LF R + V LT A Sbjct: 1 MDLRHLRYFTAVAEERHFGRAAQRLGIAQPPLSRQIQDLESELGFSLFDRSRRRVELTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G H + + L A + R+ G++ +G +S++ S + ++ F + P V Sbjct: 61 GAVLLAHVRRVFDALELAVHEARRASVGETGRLVVGYLSSLAYSGITELVRTFRGELPAV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + E I L+ G +D + +D E + + + HP Sbjct: 121 ELALREMPPQEQIEALKDGRID--VGFVRAPLHDARLASECVRREPLLVALPADHPLAAR 178 Query: 185 RS--IKQLLDYSWTMPT--PHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + ++ L + + +++ + L +P++ +SLVA Sbjct: 179 KRIPLELLSREPFVVFPRQRGSAFFDLVMGLCRAAGFSPRIAQEALHLD-ILSLVAAGFG 237 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 +S LPE + + +GL + P+ P + R D +P ++ RR Sbjct: 238 VSILPESI--KNVGRKGLALRPIV-GAPSTDLLVAWRADDA-SPTLRQFLSFVRR 288 >UniRef50_B5WR38 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=B5WR38_9BURK Length = 309 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 70/299 (23%), Positives = 122/299 (40%), Gaps = 10/299 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R FV VA + A+ L + QP LS IQ LE + A LF R S+GV LT+A Sbjct: 1 MELRHLRYFVVVAEELHFTRAAERLGIGQPPLSLQIQRLERDIGATLFRRLSRGVELTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIG-MGASISRSLMPAVISRFHQQHPQ 123 G +A IL + D+++ G + +G GA+ L+PA+I + +HP Sbjct: 61 GVLLLDNARHILALVDRTCTDVQRLSRGEIGHMRVGFAGATYFLPLVPAIIREYRTRHPD 120 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V + + S+++ L +G +D E E L+++ + HP Sbjct: 121 VVLSPEQSNTPSLVDGLLEGRVDAAFIR-PPIVSADELDVELLVKEDMVVVLPHSHPLAR 179 Query: 184 A---RSIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 A + L + ++ + Y ++ P++G + LV Sbjct: 180 AGEPVPLSALAEETFLLFPRAIGAGLYDAITSACQRAGFLPRLGQEAPQIVSIAPLVGAG 239 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 +S +P + +V LP++ PKA L RR + +P+ R Sbjct: 240 FGVSIVPRS--TTQIQTDEVVYLPIAGNAPKAPISLAWRRHNP-SPVVRLFRAVAREMA 295 >UniRef50_Q1N6N4 Transcriptional regulator, LysR family protein n=1 Tax=Bermanella marisrubri RepID=Q1N6N4_9GAMM Length = 300 Score = 223 bits (570), Expect = 5e-57, Method: Composition-based stats. Identities = 67/301 (22%), Positives = 123/301 (40%), Gaps = 18/301 (5%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + ++AF+ VA S A+ L+++QPA+SK I LE+ L QLF R + TLT A Sbjct: 1 MDTQSLQAFIAVAETESFSQAAHRLHLTQPAVSKRIAMLEDTLDCQLFDRLPRKATLTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+ A I+ EL + ++ G ++G + IG I +P ++ +FH +PQV Sbjct: 61 GEALMPKAKHIVSELLEIKTELASLSGDVSGTLRIGTSHHIGLHHLPHILRKFHSTYPQV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 K+ + + L GELD T D + + + C HP Sbjct: 121 KLAMQFLGSEAACEALANGELDIAFATL-PLEQDPKLDMQAIWRDPLTFVCSHTHPLSKQ 179 Query: 185 RS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQ----------VGVVCETFSACI 232 ++ +K L + +P P+ ++ + + + Q + ++ Sbjct: 180 KNIHLKDLTQHEAILPEPNTVTFEIIEAAFKKEKLSLQAALPSRYRETISMMSSYMETIK 239 Query: 233 SLVAKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQ 292 + + + LP+ M D + L+ L + I P ++QR+ + + Sbjct: 240 MMASVGLGWAVLPDHMAQD----KDLIRLNL-GIHPYRNLGVLQRKGKTLGSAGKAFLAI 294 Query: 293 F 293 Sbjct: 295 L 295 >UniRef50_Q475G5 Regulatory protein, LysR:LysR, substrate-binding n=9 Tax=Betaproteobacteria RepID=Q475G5_RALEJ Length = 304 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 117/294 (39%), Gaps = 6/294 (2%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + Q+R F+ VA G A+ + ++Q A+S+ + ELEE L +L R ++ V LT Sbjct: 1 MNYTLRQLRVFLAVAETGGFSRAADAVGLTQSAISRGVAELEESLGVRLLDRTTREVVLT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 AG++ +L +L ED R+ G++ I +IS LMP ++ Q+P Sbjct: 61 HAGQALAPALERLLGQLDDTLEDTRELGEHYRGRVVIAGAPTISARLMPMYVAACAAQYP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 ++++ + + I ++R G +DF + T E L+ F CR HP Sbjct: 121 EIRLTVRDNVQADGIEQVRAGGVDFGV--LIDPLVHDGLTIEPLVTDPFCFVCRRDHPLA 178 Query: 183 GARSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 +++ L + + + P+V ++ +V Sbjct: 179 QEKTVPWSALDGMRLVLLDFASGSRPLIDRVFGRHGIVPRVVQELGHSASVFGMVEAGIG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 S LP P LV P+ + +++R D +P ++ R Sbjct: 239 ASVLPTYSLPLPAASP-LVWRPLV-PREERRIVMVRREDRSLSPAAEAVWALVR 290 >UniRef50_C1DIH6 LysR family transcriptional regulator protein n=13 Tax=Pseudomonadaceae RepID=C1DIH6_AZOVD Length = 317 Score = 223 bits (569), Expect = 6e-57, Method: Composition-based stats. Identities = 67/298 (22%), Positives = 124/298 (41%), Gaps = 9/298 (3%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + + Q+R FV +A S A+ +N+SQ A S+SIQ LE QL R SK + T Sbjct: 1 MHIDLRQLRHFVALAEHRSFVAAAAAVNLSQSAFSRSIQSLEHSAGFQLVDRGSKDLPPT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 G +HA +L + + +I + G +G + G G + + L+P ++ F +P Sbjct: 61 QQGLVLLEHARRLLRQAQELDNEIGRLNGAESGALRFGCGPAPAAQLVPQAVAGFIADYP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 + +V + L GE++F + + D ++ +L +++ CR HP Sbjct: 121 RAQVNFQVDNWQELNARLIAGEIEFFVADTRRFEADPDYRVVRLQPQRWTFCCREDHPLA 180 Query: 183 --GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 GA + ++L + + K L + + P V CE A +++V SD Sbjct: 181 QTGAPTCRELFAFPLATTFRPPNIRKVLVDYSGRRDFQP--AVECEHSYALLNVVLHSDA 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEIL-----PKAAYYLIQRRDSRQTPLTASLITQF 293 + + L +L ++ Y ++ R +PL ++I + Sbjct: 239 IGIGSALNLEPYILRGNLRLLTPRDLPEHLEELHTRYGIVSRNGRTLSPLAQAMIARI 296 >UniRef50_A6F002 Transcriptional regulator, LysR family protein n=1 Tax=Marinobacter algicola DG893 RepID=A6F002_9ALTE Length = 299 Score = 223 bits (569), Expect = 6e-57, Method: Composition-based stats. Identities = 78/297 (26%), Positives = 122/297 (41%), Gaps = 5/297 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + +H +R F VA Q S A+ +++SQPA+S++++ELEE L L RR V LT+A Sbjct: 1 MNLHLLRTFASVAEQRSFSRAAEAIHISQPAVSRAVRELEEQLGMALLERRGGQVRLTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G YQHA I ++A D+R RQG G + IG +I +P VI+ F +Q P + Sbjct: 61 GAELYQHARAIFALEQSAMADLRGRQGLERGSLTIGASRTIGTYFLPPVIAEFLRQFPAI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 VRI+ + L ELD E F E + I HP + Sbjct: 121 DVRIISENTELIQRRLLAYELDIAFIEGSVEDSRVEEVFWH--EDELVILAHSDHPLLNR 178 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 +S+K L W + LL + A + VA L+ Sbjct: 179 KSLKASDLDAERWVLREQGSGTRSVTLALLKQAGVKVDRTIEVGGNGALVQSVAAGLGLA 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 + + L + +L + K + I+ R+ ++P +L+ R Sbjct: 239 MVSSVAAREHLSVGKVNVLNFPDRF-KRPLHRIRLRNKPESPAAQALVAVADRVAST 294 >UniRef50_C6IVL6 Transcriptional regulator YwqM n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVL6_9BACL Length = 302 Score = 223 bits (569), Expect = 6e-57, Method: Composition-based stats. Identities = 67/295 (22%), Positives = 117/295 (39%), Gaps = 4/295 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ + F+ V GS A++ L+ +Q +++ IQ LE + LF R + + LTDA Sbjct: 1 MESRHLFTFLVVVEAGSFTRAAQQLDYAQSSVTAQIQALEAEIGLPLFDRIGRKIVLTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +A I + A+ + ++AG + IG S++ +P VI + Q++P V Sbjct: 61 GRRLLPYAQEIAKIHEMAKNALHP-AAEMAGSLKIGAPESLAAFRLPEVIRHYRQRYPLV 119 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + GQ + + +R GELD D + E L+ + A+ HP Sbjct: 120 QIVLKPGQCWELRDLVRSGELDVAF-LLQPEVEDRDLQIETLVHEPMALVAPADHPLRHE 178 Query: 185 RSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + QL D + SY L+ P + + A V +S Sbjct: 179 AEVVPDQLKDQTILHTESGCSYRTLFERYLNSHGVFPDPNLEFWSIEAIKQCVMSGLGVS 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 LP L LV L ++ + A L R ++P + R + Sbjct: 239 FLPLVTVRSELAEGKLVKLNWNDESQRVATQLALHRKKWRSPALEQFVLMIREQA 293 >UniRef50_B5GYU9 LysR-family transcriptional regulator (Fragment) n=11 Tax=Streptomyces RepID=B5GYU9_STRCL Length = 340 Score = 223 bits (569), Expect = 6e-57, Method: Composition-based stats. Identities = 70/277 (25%), Positives = 120/277 (43%), Gaps = 9/277 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ +R VA GS A+R L +QPA+S+ ++ LE L R + + LT A Sbjct: 2 IEARHLRVLRAVATTGSFSAAARALGCTQPAVSQQMKALETSAGTPLLIRTGREMRLTQA 61 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE +HAS IL L AA+E++ G AG++ + S S +L+P+ ++ HP Sbjct: 62 GEVLVRHASGILAGLTAAEEEVAAIAGLRAGRVRLVSFPSGSSTLVPSALAALRAAHPGT 121 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDH----EFTFEKLLEKQFAIFCRPGHP 180 +V ++E + + LR+G+ D + Y G + LL + GH Sbjct: 122 RVSLVEAEPPRSVEMLREGDCDVALAFRYAGAEREAEWGDLVVRPLLSDRLVGLVPEGHR 181 Query: 181 AIGAR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 GA +I L D W P +QL E+ + P++ + + I LV Sbjct: 182 LAGADTVTIDDLADEPWIAGCPR--CRRQLVEVCESAGFAPRIDFATDDYPTVIGLVGAG 239 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLI 275 ++ LP + + + +G + V + + L Sbjct: 240 LGVAVLP-GLALESVRPKGARAVAVEPPVVRKIVALT 275 >UniRef50_A9AUC8 Transcriptional regulator, LysR family n=2 Tax=Chloroflexi (class) RepID=A9AUC8_HERA2 Length = 300 Score = 222 bits (568), Expect = 8e-57, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 126/296 (42%), Gaps = 4/296 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + ++R FV A+ + A+ L+++QP +S+ IQ LE L LF R S+G+ LT A Sbjct: 2 LDLQKLRMFVAAAQSRNFTRAAEQLDLTQPTVSQQIQTLERELGVSLFERLSRGIELTAA 61 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + HA ++ R A++ +R GQ + +G+G +++ +P ++ RF+ +HP Sbjct: 62 GRALLPHAEQMIALERIAEQAVRAAAGQSERTLLLGVGNTLATYALPDLLQRFNWEHPAF 121 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 V I G ++ ++ GE + + + L + + P P Sbjct: 122 VVHIGTGNTEQLLAQVISGEFELALVG--SPIVHTQLIIMPFLTTELVVIVSPDDPWARL 179 Query: 185 R--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + +I+ L + + +SELL+ Q P+ +V A V ++ Sbjct: 180 KQINIEALHGRRMLLREEGSALQASVSELLNAQQIRPKQPIVLGNLEAIKRSVEVGLGIA 239 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 +P + L + ++ + + Y ++ RD T + R+ G Sbjct: 240 LVPAMAVRREVAAGRLRQIHLANVPTRRVYNVVHHRDRHITNAAQLFLDLLRKPLG 295 >UniRef50_A6UMN5 Transcriptional regulator, LysR family n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UMN5_SINMW Length = 296 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 70/301 (23%), Positives = 127/301 (42%), Gaps = 12/301 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ ++++V VA + A++ LN+SQP L+K IQ+LE L LF R + V LT A Sbjct: 1 MEHRLLQSYVAVAEELHFGRAAKRLNISQPPLTKQIQQLERELGVALFERTKRKVELTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + A +L + A E +R+ + G + +G + SL+P V+ F + +P V Sbjct: 61 GSVLLEEARRLLRQTENAAELVRKTERGETGHLAVGFIDAAIYSLVPNVVECFTRSYPHV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 V + + ++ + + +G LD + + + E +L + + H Sbjct: 121 TVELADLRIPDQVRGVSEGRLD--VGFIHPPIRGEQLAIETVLVEPLVVAVPQRHRLASR 178 Query: 185 RS--IKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + +L + + + + Y ++ L P++ I LV+ Sbjct: 179 AEIPLAELANEALIQFPRSINPTLYDEIIGLCQSSGFNPKIVREATPKQTIIGLVSVGLG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR---REC 297 +S LP + + L G+ P+S +I R D R P T + I R RE Sbjct: 239 VSLLPRCL--ENLKRDGVAYRPISGPNLSIDTSIIYRSD-RLRPATKAFINVVRTVAREA 295 Query: 298 G 298 G Sbjct: 296 G 296 >UniRef50_B8IJK2 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IJK2_METNO Length = 306 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 65/299 (21%), Positives = 117/299 (39%), Gaps = 10/299 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + +R FV +A Q A+ +LNM+QP LS+ I+ LE+ L LF R ++ + LT A Sbjct: 1 MDLRHLRYFVVLAEQRHFGRAAELLNMAQPPLSQQIKALEDELEVTLFDRSTRPIELTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + + A IL + AQ R+ G + IG+ S + +P V+ F + P + Sbjct: 61 GRTLLREARQILHHVSRAQAATRRAGQGQDGHLVIGVTGSAAMEFLPPVLLAFRARWPDI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG- 183 ++ + E I L +GE+ I D + + F + HP G Sbjct: 121 RLSLREMSSPEQIAALERGEIH--IGFVRPPVLDDRLNVRLVHQDPFVVALPGDHPQAGV 178 Query: 184 -ARSIKQLLDYSWTM--PTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + L + + P + + + P+ + ++LV+ Sbjct: 179 EGVRLADLNGTALIIFDPAEAPGFRDLIIHVCRTAGYVPETLESAPQMTTMLALVSAGLG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDS--RQTPLTASLITQFRREC 297 + +P L + +V P+ + Y + RD R S+I + R Sbjct: 239 FALVPRS--ARRLALERVVFRPLLDPCAAVELYAVWSRDKAVRLAEELVSVIDEARYAA 295 >UniRef50_Q46NS6 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=Q46NS6_RALEJ Length = 313 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 129/297 (43%), Gaps = 4/297 (1%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++++ ++ + +A G++ ++ +LN +QP LSK +++LE+ + LF R+++G+ T Sbjct: 6 RLRLRNLQMLLSLAETGNMSQSAALLNTTQPGLSKWLKDLEDDIGLPLFERQARGLQPTP 65 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 GES +HA I +L A++D+ + +G + +G + + +P + + Q+ P+ Sbjct: 66 YGESLIEHARRITAQLDTARDDLAAMREGGSGLVVVGTSGASAADTVPLAVLQLLQRMPR 125 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI- 182 +VR++E + ++N+L ELD + D + E L + RP HP Sbjct: 126 AQVRLVETTMDRLMNQLAHNELDIVVGRSAPELQDAQTIGESLYLEPIHFVARPRHPLAT 185 Query: 183 -GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAKSDF 240 + + L Y W + L L + P V + ++L+ SD Sbjct: 186 PNTVTWEALQSYRWVVWPRGTPIRNALEAALASAGRPLPADCVESNSTVLNLTLLNSSDM 245 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 + L ++P+ + + R DS A+++ RR Sbjct: 246 IGLASHRTARRLEELGALRIVPLRLAG-FGSVSMYWREDSVNRSAVAAMLDCLRRAA 301 >UniRef50_A6W290 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=A6W290_MARMS Length = 404 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 63/293 (21%), Positives = 126/293 (43%), Gaps = 3/293 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + Q+RA V V+ + ASR L +SQ ++ ++ ++LE L LF + S G + T A Sbjct: 105 ISTTQLRALVAVSEAQNFSIASRNLAVSQSSVHRAARDLERLLGVVLFEKNSLGTSATKA 164 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 ++ + L ELR +I Q + I IG +++P I +F+++HP V Sbjct: 165 AQTLAKATKLAFSELRQGIYEINALQFKDVSTITIGSMPLARMTILPKSILQFNERHPDV 224 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + + EG +++ LRQG++D + + E+L ++ R HP + Sbjct: 225 NINVTEGPYADLLHHLRQGDIDIILGALRHPTPADDVVQEELWAPPLSVVARKDHPLMSK 284 Query: 185 RSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAKSDFL 241 ++I + L +++W +P + ++ D P V + L+ +SD L Sbjct: 285 QNISAQDLAEFAWVVPAKGTPTRQAFEDIFKDAGIALPTRLVESSSQILIRELLIESDRL 344 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 + + ++ + L ++ + L R+ T + ++ R Sbjct: 345 TLISAHQVEREINIELLNIIDFPLDHTRRPIGLCVRKSWLPTVTQSHFLSLLR 397 Score = 99.3 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 28/81 (34%), Positives = 48/81 (59%) Query: 6 KIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAG 65 + +R F+ VA SI AS + +SQPA++++I +LE L A LF R S G+ T +G Sbjct: 7 NLRHLRVFLAVAELKSITRASENIFLSQPAITQAIAKLEGLLGASLFERHSDGMYPTPSG 66 Query: 66 ESFYQHASLILEELRAAQEDI 86 E + + S ++ ++ A ++I Sbjct: 67 EVWQKRVSRAIDHIQTATQEI 87 >UniRef50_A5W321 Transcriptional regulator, LysR family n=3 Tax=Pseudomonas putida RepID=A5W321_PSEP1 Length = 293 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 66/299 (22%), Positives = 124/299 (41%), Gaps = 9/299 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + +R VE+ RQGS A++ L+++QPALS ++ LEE L LF R ++ V LT Sbjct: 1 MNLKALRCCVEIVRQGSFTKAAQHLHIAQPALSMAVTRLEEELGVTLFNRTTRKVILTAE 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE F + L E+ A++++R G++ +G+ +P +++ F + +P + Sbjct: 61 GEQFLPRIASALREMDVARQELRDMADLKRGEVRLGIPPMFGLHYVPGLMNAFRKSYPGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + + EG + + L Q E+D + + P D E L + P HP G Sbjct: 121 AMTVFEGSAEDIGHRLEQREIDLALLESRRVPPDKE--SILLGSDEMLACMHPDHPYAGK 178 Query: 185 R--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + + L + + L + T QV + S + + ++ Sbjct: 179 AYLTAEDLRNTDMVVFDRTFVQRHLLDAFFAEHGITYQVALQSNFVSLVVQAALDNMGVA 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQ 301 L + G+V +P + ++ L R + + I F + YL+ Sbjct: 239 TLLRSV---QQRTPGIVGVPFR-PAQQMSFRLCWRSGEYLSLASKRFID-FAAQTHYLE 292 >UniRef50_A3K882 Transcriptional regulator, LysR family, putative n=1 Tax=Sagittula stellata E-37 RepID=A3K882_9RHOB Length = 326 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 70/296 (23%), Positives = 124/296 (41%), Gaps = 2/296 (0%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 +K+ + V +A G+ A+ LNM+Q SK ++++EE AA LF R +G+ LT Sbjct: 27 NLKVRHLSLIVALADHGTTHSAADALNMTQSTASKMLRDVEEIFAASLFERSPRGMVLTP 86 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 G+ +A L L+ E+ R+ G + IG + L+ ++ + PQ Sbjct: 87 LGQFAVDNARAQLSRLQRFSEEFSARRAGGYGTLAIGAITGAAPDLVARAVAEIKARRPQ 146 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI- 182 + V + +++EL G LD + + + FTFE L E++ + R GH Sbjct: 147 LAVALHGETSDGILSELEAGRLDLAVGRFSAERHRTVFTFEPLAEERLVVVARAGHRLAS 206 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQ-TPQVGVVCETFSACISLVAKSDFL 241 G R + L D +W + + L D A P+ + C + ++LV +SD + Sbjct: 207 GTRRLDDLQDCAWALQPKSNPSRQVLDAAFDRAALRRPRDTIECSSILLILNLVQESDAV 266 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 + LP + +L + + + + L+ RR P R Sbjct: 267 ALLPMAVVQAHQMAGLFTVLDIRPEIRLSGFGLVTRRKEPLEPAALEFCDILRARA 322 >UniRef50_A7IMC0 Transcriptional regulator, LysR family n=18 Tax=Proteobacteria RepID=A7IMC0_XANP2 Length = 320 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 62/300 (20%), Positives = 127/300 (42%), Gaps = 6/300 (2%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 ++ +R+FVEV RQG A++ + SQ A+SK++++LE + L R L Sbjct: 24 GLAMEFRPLRSFVEVVRQGGFSQAAKAVLTSQSAVSKAVKQLEAEVGVPLLDRMGHRSVL 83 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T AGE Y+ A +L + ++ + +G G + +G+ + S +++ + Q+ Sbjct: 84 TPAGEVVYRRAVKLLADRADLLAELDEIRGLRRGVLRLGLLPACSSVPFTPLLALYRQRF 143 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P+++VR++E + ++LR G++D + P EF FE L + GHP Sbjct: 144 PEIEVRLVERDSAQLEDDLRTGDIDIAGSLL---PISPEFDFEPLCREPLVAVLPSGHPL 200 Query: 182 I--GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 + L D + M + ++ + + P + + L A Sbjct: 201 ATQAEIRLADLRDTPFIMLESGLALHRIVLDASRRAGFLPAIAARSSQIDFTMELAAAGL 260 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 ++ LP + H + + ++E + + + RR + + ++ + R G Sbjct: 261 GVAFLPRMIAAQR-HDAAVCQVRLAEPDLEWSMAMAWRRGAYLSDAASAWLALVRERHGE 319 >UniRef50_D2QVQ4 Transcriptional regulator, LysR family n=22 Tax=Bacteroidetes RepID=D2QVQ4_9SPHI Length = 298 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 134/293 (45%), Gaps = 8/293 (2%) Query: 9 QIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESF 68 ++ F VAR+ S A+ L ++QPA++K IQELE L LF RR ++LT AG Sbjct: 5 RLTVFYTVARRLSFTKAAAELFVTQPAITKHIQELESQLGTALFDRRGNQISLTTAGNVL 64 Query: 69 YQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRI 128 +HA I+ R + D+ + +G+ G++ +G ++I++ ++PAV++RF +Q P V + + Sbjct: 65 LRHAETIMGVYRQIEFDLNELKGKPGGRLRLGASSTIAQYVIPAVLARFGEQFPDVTLSL 124 Query: 129 MEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGAR--S 186 + G + L E+D + + + + ++ + + CR HP G + Sbjct: 125 LSGNTEQIEQALLHDEIDLGLVEGRT--HHSDVRYTPFVKDELVLVCRADHPLAGRDEIT 182 Query: 187 IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT---PQVGVVCETFSACISLVAKSDFLSK 243 + +L + P + + L Q + + + ++ S ++ Sbjct: 183 LDELKTVPLVLREPGSGSREVVEHALRGAGLRLAELQQAMQLGSTEGIKTYLSSSSGMAF 242 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 + + L L +L V+++ + +Y IQ + + L + + RR+ Sbjct: 243 VSIFAVPNELKSGTLRVLDVADLTIERDFYAIQLQGMSEG-LADTFMRFVRRQ 294 >UniRef50_A1WN33 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WN33_VEREI Length = 311 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 72/290 (24%), Positives = 142/290 (48%), Gaps = 4/290 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + I ++ F VA GSI A + L++SQ A++++IQ LE L + LF R ++G+ LT Sbjct: 1 MSISIRTLQYFNAVAETGSISAAMQTLDISQAAITEAIQRLEAHLGSMLFRRHARGMALT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 AG F +H+ LIL + +A+ + R + G+++IG + + +P ++ RF + P Sbjct: 61 HAGHEFLRHSHLILNAVSSAENALAVRPDAMTGELSIGAVSPLMGYYLPGLLERFRRSFP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 +V VRI+E ++ + + GE+D + H F +L+ + ++ GH + Sbjct: 121 RVTVRIIEESGSTIEHLIVNGEIDVALTLTSHLENHHAFHTLQLVRSPWHLWLPTGHRLV 180 Query: 183 GAR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 GA+ ++++L + + + + + +L ++ P++ + A SLVA + Sbjct: 181 GAKPVTLRELHNEAVIVL-RNDELERTTGDLWLRESVRPRIVAKTRSVEAVRSLVATGNG 239 Query: 241 LSKLPEEMGCD-PLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASL 289 + LPE + G L+ P+ LI RR ++ + ++ Sbjct: 240 ICVLPEVLFRQWSSEGLRLIAQPLRNEPATLELGLIWRRGAKVSAAISAF 289 >UniRef50_B1Z1E9 Transcriptional regulator, LysR family n=50 Tax=Burkholderia RepID=B1Z1E9_BURA4 Length = 306 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 81/299 (27%), Positives = 149/299 (49%), Gaps = 5/299 (1%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 + + I Q++AFV A S+R A+R L ++QPA++ +I+ELE L A+L R +GV Sbjct: 4 IRNHLNIAQLQAFVSAAHHKSLRAAARELGVTQPAITHTIRELETALNAELLVRSVRGVE 63 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT G + A +L ++R E + Q +G+++G++ +G SI+ + +P ++ F + Sbjct: 64 LTACGHALLPRAEQLLGDMRRTVEAVEQVKGEMSGRVAVGTMPSIALTALPHAVTAFRRS 123 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P V + + E + + +LR G LD ++ D +FT LL +F + R GHP Sbjct: 124 MPNVSLHLEEVTVPDALAQLRNGTLDIA-AMHHVPALDRDFTQVPLLSTEFTVVMREGHP 182 Query: 181 AIGARSIKQLLDYSWTMP-TPHGSYYKQLSELLDDQAQT-PQVGVVCE-TFSACISLVAK 237 AR ++++LD W + + +S + D + P+ + +F+ + LVA+ Sbjct: 183 LAHARRLEEMLDAEWIVTVGAEQLPHSVMSAMFDARGLPLPKRLLRSPMSFAVTLGLVAR 242 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 SD + + + G+ + E +P+ +I RRD TP + + +R Sbjct: 243 SDVIGCFTRPLAAM-VAPLGIRTAELDESMPRFDLSIIARRDLLPTPAVSEFVGCLQRA 300 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=... 318 1e-85 UniRef50_P39592 Uncharacterized HTH-type transcriptional regulat... 307 2e-82 UniRef50_P77744 HTH-type transcriptional regulator abgR n=48 Tax... 306 5e-82 UniRef50_UPI00016945AE hypothetical protein Plarl_07755 n=1 Tax=... 299 1e-79 UniRef50_UPI0001745DD5 transcriptional regulator, LysR family pr... 298 1e-79 UniRef50_P20668 HTH-type transcriptional regulator gltC n=17 Tax... 297 3e-79 UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Ba... 296 6e-79 UniRef50_Q1IRZ3 Transcriptional regulator, LysR family n=1 Tax=C... 294 2e-78 UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepI... 293 4e-78 UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=P... 293 5e-78 UniRef50_C6CYG5 Transcriptional regulator, LysR family n=2 Tax=P... 291 3e-77 UniRef50_C0ZCK2 Transcriptional regulator n=1 Tax=Brevibacillus ... 290 4e-77 UniRef50_C6J455 LysR family transcriptional regulator n=2 Tax=Ba... 289 8e-77 UniRef50_D0YA85 Transcriptional regulator, LysR family n=5 Tax=K... 288 1e-76 UniRef50_C7I3E5 Transcriptional regulator, LysR family n=1 Tax=T... 288 1e-76 UniRef50_UPI00016C47B2 transcriptional regulator, LysR family pr... 287 3e-76 UniRef50_D2P368 Transcription activator of glutamate synthase op... 286 5e-76 UniRef50_Q3M2K4 Transcriptional regulator, LysR family n=5 Tax=C... 286 9e-76 UniRef50_Q04778 HTH-type transcriptional regulator alsR n=87 Tax... 285 1e-75 UniRef50_Q1IHL3 Transcriptional regulator, LysR family n=1 Tax=C... 285 1e-75 UniRef50_B5JN19 Putative uncharacterized protein n=1 Tax=Verruco... 285 2e-75 UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=G... 284 2e-75 UniRef50_C5BDD2 HTH-type transcriptional regulator AlsR n=2 Tax=... 284 2e-75 UniRef50_C0ZI27 Transcriptional regulator n=1 Tax=Brevibacillus ... 282 1e-74 UniRef50_A9WGB3 LysR substrate-binding n=2 Tax=Chloroflexus RepI... 282 1e-74 UniRef50_Q46MA3 Transcriptional regulator, LysR family n=1 Tax=R... 281 2e-74 UniRef50_P37499 Uncharacterized HTH-type transcriptional regulat... 280 3e-74 UniRef50_P27111 HTH-type transcriptional regulator cynR n=108 Ta... 280 5e-74 UniRef50_C2BX95 Transcriptional regulator n=1 Tax=Listeria grayi... 280 6e-74 UniRef50_Q5WCI6 LysR family transcriptional activator of glutama... 279 7e-74 UniRef50_Q65GU9 Transcriptional regulator YbbE n=2 Tax=Bacillus ... 279 1e-73 UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Prote... 279 1e-73 UniRef50_A4F7Y9 Transcriptional regulator, LysR family n=3 Tax=A... 278 1e-73 UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=... 278 2e-73 UniRef50_Q3MEY8 Transcriptional regulator, LysR family n=1 Tax=A... 278 2e-73 UniRef50_B4WMZ4 Putative uncharacterized protein n=1 Tax=Synecho... 277 3e-73 UniRef50_Q1ATU8 Transcriptional regulator, LysR family n=1 Tax=R... 277 3e-73 UniRef50_A3I8L6 Transcriptional regulator, LysR family protein n... 277 4e-73 UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=C... 277 4e-73 UniRef50_B9XBB1 Transcriptional regulator, LysR family n=2 Tax=V... 276 5e-73 UniRef50_P77559 Uncharacterized HTH-type transcriptional regulat... 276 5e-73 UniRef50_C9KJ25 Transcriptional regulator GltC n=1 Tax=Mitsuokel... 276 5e-73 UniRef50_P0ACQ6 Hydrogen peroxide-inducible genes activator n=27... 276 5e-73 UniRef50_C1M4D9 Putative uncharacterized protein n=2 Tax=Citroba... 276 6e-73 UniRef50_Q1AYT0 Transcriptional regulator, LysR family n=1 Tax=R... 276 6e-73 UniRef50_C8WUA0 Transcriptional regulator, LysR family n=1 Tax=A... 276 6e-73 UniRef50_B8K739 Transcriptional regulator, substrate-binding of ... 275 8e-73 UniRef50_Q1AVR3 Transcriptional regulator, LysR family n=1 Tax=R... 275 9e-73 UniRef50_C6D9U9 Transcriptional regulator, LysR family n=1 Tax=P... 275 1e-72 UniRef50_C6D0W9 Transcriptional regulator, LysR family n=1 Tax=P... 275 1e-72 UniRef50_B5JQV8 LysR substrate binding domain protein n=1 Tax=Ve... 274 2e-72 UniRef50_C6BXQ9 Transcriptional regulator, LysR family n=1 Tax=D... 274 2e-72 UniRef50_A6UMN5 Transcriptional regulator, LysR family n=1 Tax=S... 274 3e-72 UniRef50_C7I2X4 Transcriptional regulator, LysR family n=1 Tax=T... 274 3e-72 UniRef50_D1VD43 Transcriptional regulator, LysR family n=1 Tax=F... 274 3e-72 UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=C... 273 5e-72 UniRef50_C9YBM2 Putative uncharacterized protein n=2 Tax=cellula... 273 5e-72 UniRef50_B1ZUQ0 Transcriptional regulator, LysR family n=1 Tax=O... 273 6e-72 UniRef50_B5WR38 Transcriptional regulator, LysR family n=2 Tax=B... 272 8e-72 UniRef50_Q2J7C4 Transcriptional regulator, LysR family n=22 Tax=... 272 9e-72 UniRef50_B9Y467 Putative uncharacterized protein n=1 Tax=Holdema... 272 1e-71 UniRef50_Q7W9G9 Probable LysR-family transcriptional regulator n... 272 1e-71 UniRef50_B5ELK2 Transcriptional regulator, LysR family n=2 Tax=A... 272 1e-71 UniRef50_Q67SW7 LysR family transcriptional regulator n=1 Tax=Sy... 271 2e-71 UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=ma... 271 2e-71 UniRef50_C0Z518 Transcriptional regulator n=3 Tax=Paenibacillace... 271 3e-71 UniRef50_C1F961 Transcriptional regulator, LysR family n=1 Tax=A... 270 4e-71 UniRef50_C0Z4V5 Transcriptional regulator n=1 Tax=Brevibacillus ... 269 6e-71 UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax... 269 6e-71 UniRef50_A9WIA6 LysR substrate-binding n=4 Tax=Chloroflexaceae R... 269 1e-70 UniRef50_A6SW66 Transcriptional regulator, LysR family n=1 Tax=J... 268 1e-70 UniRef50_B9TDR3 HTH-type transcriptional regulator xapR, putativ... 268 2e-70 UniRef50_A0JW92 Transcriptional regulator, LysR family n=3 Tax=M... 268 2e-70 UniRef50_A0R3Z8 Transcriptional regulator, LysR family protein n... 267 2e-70 UniRef50_UPI0001694914 Transcriptional Regulator, LysR family pr... 267 2e-70 UniRef50_B5XVV4 Transcriptional regulator cynR n=5 Tax=Enterobac... 267 2e-70 UniRef50_C1ZI46 Transcriptional regulator, COG0583 n=1 Tax=Planc... 267 3e-70 UniRef50_A9B3V4 Transcriptional regulator, LysR family n=1 Tax=H... 267 4e-70 UniRef50_Q4ZQQ6 Regulatory protein, LysR:LysR, substrate-binding... 267 4e-70 UniRef50_C8WSN1 Transcriptional regulator, LysR family n=1 Tax=A... 267 4e-70 UniRef50_Q1YDL8 Transcriptional regulator, LysR family n=1 Tax=A... 267 5e-70 UniRef50_C1PEC2 Transcriptional regulator, LysR family n=1 Tax=B... 266 5e-70 UniRef50_B1Z4Z1 Transcriptional regulator, LysR family n=5 Tax=P... 266 5e-70 UniRef50_A9F7Y4 Transcriptional regulator, LysR family n=1 Tax=S... 266 5e-70 UniRef50_A4ISN4 Transcriptional regulator LysR family n=6 Tax=Ge... 266 6e-70 UniRef50_C3LMU4 Transcriptional regulator, LysR family n=65 Tax=... 266 6e-70 UniRef50_Q12AP3 Transcriptional regulator, LysR family n=4 Tax=B... 265 9e-70 UniRef50_A6VSP2 Transcriptional regulator, LysR family n=1 Tax=M... 265 1e-69 UniRef50_B8KMT5 Transcriptional regulator, LysR family n=1 Tax=g... 265 1e-69 UniRef50_C1DGS2 Transcriptinal regulator, LysR family n=1 Tax=Az... 265 1e-69 UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=R... 265 1e-69 UniRef50_P25544 RuBisCO operon transcriptional regulator n=13 Ta... 265 1e-69 UniRef50_UPI0001744D79 transcriptional regulator, LysR family pr... 265 1e-69 UniRef50_Q11BY5 Transcriptional regulator, LysR family n=1 Tax=C... 265 2e-69 UniRef50_Q46WQ0 Transcriptional regulator, LysR family n=1 Tax=R... 265 2e-69 UniRef50_C6J497 Transcriptional regulator n=1 Tax=Paenibacillus ... 265 2e-69 UniRef50_Q1IRM1 Transcriptional regulator, LysR family n=1 Tax=C... 264 2e-69 UniRef50_UPI0001C3192A transcriptional regulator, LysR family n=... 264 3e-69 UniRef50_C1F7X5 Transcriptional regulator, LysR family n=1 Tax=A... 264 3e-69 UniRef50_Q7W708 Putative LysR-family transcriptional regulator n... 264 4e-69 UniRef50_A0QNN2 Transcriptional regulator, LysR family protein n... 264 4e-69 UniRef50_Q7WNC1 LysR-family transcriptional regulator n=1 Tax=Bo... 263 4e-69 UniRef50_Q46PT5 Transcriptional regulator, LysR family n=1 Tax=R... 263 5e-69 UniRef50_C6D4H5 Transcriptional regulator, LysR family n=4 Tax=B... 263 6e-69 UniRef50_B2SBJ3 ALS operon regulatory protein n=36 Tax=Proteobac... 263 6e-69 UniRef50_D1WWA8 Transcriptional regulator, LysR family n=7 Tax=S... 263 7e-69 UniRef50_C1BAS4 Putative LysR family transcriptional regulator n... 262 1e-68 UniRef50_A4FE82 LysR-family transcriptional regulator n=5 Tax=Ac... 262 1e-68 UniRef50_A9BVL3 Transcriptional regulator, LysR family n=3 Tax=C... 262 1e-68 UniRef50_B9XJ57 Transcriptional regulator, LysR family n=2 Tax=b... 261 2e-68 UniRef50_A5VFC0 Transcriptional regulator, LysR family n=2 Tax=P... 261 2e-68 UniRef50_A3K7Z5 Regulatory protein, LysR:LysR, substrate-binding... 261 2e-68 UniRef50_Q1IX51 Transcriptional regulator, LysR family n=3 Tax=D... 261 2e-68 UniRef50_A0LNI4 Transcriptional regulator, LysR family n=4 Tax=D... 261 3e-68 UniRef50_Q47141 Hca operon transcriptional activator n=46 Tax=Ga... 261 3e-68 UniRef50_A0KPQ5 Transcriptional regulator n=1 Tax=Aeromonas hydr... 260 4e-68 UniRef50_Q2RHB2 Transcriptional regulator, LysR family n=1 Tax=M... 260 4e-68 UniRef50_C5BEX8 Transcriptional regulator, LysR family n=12 Tax=... 260 5e-68 UniRef50_B8IJK2 Transcriptional regulator, LysR family n=1 Tax=M... 260 6e-68 UniRef50_C1A9Z7 LysR family transcriptional regulator n=1 Tax=Ge... 259 7e-68 UniRef50_A3VLP1 LysR family transcriptional regulatory protein n... 259 7e-68 UniRef50_A0K8T5 Transcriptional regulator, LysR family n=55 Tax=... 259 9e-68 UniRef50_A1WVW1 Transcriptional regulator, LysR family n=11 Tax=... 259 1e-67 UniRef50_C4L1Y9 Transcriptional regulator, LysR family n=2 Tax=E... 258 2e-67 UniRef50_Q46UX6 Transcriptional regulator, LysR family n=4 Tax=C... 257 2e-67 UniRef50_B8DKN9 Transcriptional regulator, LysR family n=4 Tax=P... 257 3e-67 UniRef50_A1WHL2 Transcriptional regulator, LysR family n=10 Tax=... 257 3e-67 UniRef50_Q4ZY05 Regulatory protein, LysR:LysR, substrate-binding... 257 3e-67 UniRef50_B8IWD6 Transcriptional regulator, LysR family n=1 Tax=M... 257 3e-67 UniRef50_B4CXF3 Transcriptional regulator, LysR family n=1 Tax=C... 257 3e-67 UniRef50_Q475G5 Regulatory protein, LysR:LysR, substrate-binding... 257 4e-67 UniRef50_B8IDW8 Transcriptional regulator, LysR family n=1 Tax=M... 256 5e-67 UniRef50_Q7WCW0 Probable LysR-family transcriptional regulator n... 256 6e-67 UniRef50_B2JVU4 Transcriptional regulator, LysR family n=43 Tax=... 256 6e-67 UniRef50_B1Y5W5 Transcriptional regulator, LysR family n=2 Tax=B... 256 6e-67 UniRef50_Q0K6D4 Transcriptional regulator, LysR-family n=2 Tax=C... 256 7e-67 UniRef50_A0AYH9 Transcriptional regulator, LysR family n=148 Tax... 256 7e-67 UniRef50_B2T7R4 Transcriptional regulator, LysR family n=5 Tax=B... 256 8e-67 UniRef50_Q28M96 Transcriptional regulator, LysR family n=3 Tax=R... 255 9e-67 UniRef50_Q126X0 Transcriptional regulator, LysR family n=4 Tax=P... 255 1e-66 UniRef50_Q13QG4 Transcriptional regulator, LysR family n=4 Tax=B... 255 1e-66 UniRef50_Q7W5S7 LysR-family transcriptional regulator n=3 Tax=Bo... 255 1e-66 UniRef50_A1TN88 Transcriptional regulator, LysR family n=9 Tax=B... 255 1e-66 UniRef50_B4SSK9 Transcriptional regulator, LysR family n=3 Tax=S... 255 1e-66 UniRef50_C3KMF5 Transcriptional regulator, LysR family n=42 Tax=... 255 1e-66 UniRef50_Q2RHG4 Transcriptional regulator, LysR family n=1 Tax=M... 255 2e-66 UniRef50_B5WW96 Transcriptional regulator, LysR family n=2 Tax=B... 255 2e-66 UniRef50_Q1QYT3 Transcriptional regulator, LysR family n=1 Tax=C... 254 2e-66 UniRef50_Q2T940 Transcriptional regulator, LysR family n=6 Tax=B... 254 2e-66 UniRef50_B9X9V4 Transcriptional regulator, LysR family n=1 Tax=b... 254 2e-66 UniRef50_A1W235 Transcriptional regulator, LysR family n=6 Tax=B... 254 3e-66 UniRef50_Q8XFS3 Probable transcription regulator protein n=1 Tax... 254 3e-66 UniRef50_B9J8D6 Transcriptional regulator protein n=69 Tax=Prote... 254 3e-66 UniRef50_Q1AUB8 Transcriptional regulator, LysR family n=2 Tax=B... 254 4e-66 UniRef50_C1DL37 LysR family transcriptional regulator protein n=... 254 4e-66 UniRef50_Q127N6 Transcriptional regulator, LysR family n=1 Tax=P... 254 4e-66 UniRef50_C6IVL6 Transcriptional regulator YwqM n=1 Tax=Paenibaci... 253 5e-66 UniRef50_D1RNC3 Transcriptional regulatory protein n=1 Tax=Serra... 253 5e-66 UniRef50_A7IMC0 Transcriptional regulator, LysR family n=18 Tax=... 253 6e-66 UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Sy... 253 7e-66 UniRef50_C4ZIH4 Transcriptional regulator, LysR family n=1 Tax=T... 253 7e-66 UniRef50_C7MTU9 Transcriptional regulator, LysR family n=3 Tax=A... 253 7e-66 UniRef50_Q7NKC0 Nitrogen assimilation transcriptional activator ... 253 7e-66 UniRef50_A0AXF9 Transcriptional regulator, LysR family n=9 Tax=B... 252 8e-66 UniRef50_A3ZYQ6 Transcriptional regulator, LysR family protein n... 252 8e-66 UniRef50_Q1DBN8 Transcriptional regulator, LysR family n=2 Tax=C... 252 9e-66 UniRef50_C7JCS7 Transcriptional regulator LysR n=11 Tax=Proteoba... 252 1e-65 UniRef50_A0QTM3 HTH-type transcriptional regulator AlsR n=7 Tax=... 252 1e-65 UniRef50_D0J615 Transcriptional regulator, LysR family n=2 Tax=C... 252 1e-65 UniRef50_B4STD8 Transcriptional regulator, LysR family n=6 Tax=G... 252 1e-65 UniRef50_Q67MJ1 LysR family transcriptional regulator n=1 Tax=Sy... 252 1e-65 UniRef50_B1ZCQ9 Transcriptional regulator, LysR family n=3 Tax=R... 252 1e-65 UniRef50_C8WV81 Transcriptional regulator, LysR family n=2 Tax=A... 252 1e-65 UniRef50_A8IAC4 Transcriptional regulator n=1 Tax=Azorhizobium c... 252 1e-65 UniRef50_B1M8F7 Transcriptional regulator, LysR family n=4 Tax=R... 252 2e-65 UniRef50_B9JZE6 Transcriptional regulator LysR family n=1 Tax=Ag... 252 2e-65 UniRef50_A0KPM6 Transcriptional regulator, LysR family n=2 Tax=G... 251 2e-65 UniRef50_C5BQI4 Transcriptional regulator, LysR family n=1 Tax=T... 251 2e-65 UniRef50_A4JMP2 Transcriptional regulator, LysR family n=1 Tax=B... 251 2e-65 UniRef50_A5D1Z5 Transcriptional regulator n=1 Tax=Pelotomaculum ... 251 2e-65 UniRef50_B0T3V7 Transcriptional regulator, LysR family n=1 Tax=C... 251 2e-65 UniRef50_Q4KEU3 Transcriptional regulator, LysR family n=8 Tax=P... 251 2e-65 UniRef50_Q0KE24 Transcriptional regulator, LysR-family n=2 Tax=C... 251 3e-65 UniRef50_Q9RYH7 Transcriptional regulator, HTH_1 family n=2 Tax=... 250 3e-65 UniRef50_C7H9N7 Transcriptional regulator, LysR family n=2 Tax=F... 250 3e-65 UniRef50_Q7WJM8 Probable LysR-family transcriptional regulator n... 250 3e-65 UniRef50_C1DMS0 Transcriptional regulator, LysR family n=1 Tax=A... 250 4e-65 UniRef50_A4XPG0 Transcriptional regulator, LysR family n=1 Tax=P... 250 4e-65 UniRef50_Q5FRA7 Putative transcriptional regulator n=1 Tax=Gluco... 250 4e-65 UniRef50_B2TGB5 Transcriptional regulator, LysR family n=2 Tax=B... 250 5e-65 UniRef50_D2Q131 Transcriptional regulator, LysR family n=1 Tax=K... 250 5e-65 UniRef50_P52661 HTH-type transcriptional regulator gbpR n=1 Tax=... 250 5e-65 UniRef50_P42722 HTH-type transcriptional regulator cfxR n=9 Tax=... 250 5e-65 UniRef50_UPI0001C3125C transcriptional regulator, LysR family n=... 250 5e-65 UniRef50_D0D0K4 Transcriptional regulator n=1 Tax=Citreicella sp... 250 5e-65 UniRef50_C3KNJ1 Putative transcriptional regulator, LysR-type n=... 250 5e-65 UniRef50_B1YXM2 Transcriptional regulator, LysR family n=3 Tax=B... 250 6e-65 UniRef50_Q7WNE4 LysR-family transcriptional regulator n=1 Tax=Bo... 250 6e-65 UniRef50_A9BN68 Transcriptional regulator, LysR family n=1 Tax=D... 250 6e-65 UniRef50_A6UGP0 Transcriptional regulator, LysR family n=2 Tax=S... 249 6e-65 UniRef50_B9Z0M9 Transcriptional regulator, LysR family n=2 Tax=B... 249 7e-65 UniRef50_A9I810 Transcriptional regulator, LysR-family n=5 Tax=P... 249 9e-65 UniRef50_B1K332 Transcriptional regulator, LysR family n=6 Tax=B... 249 1e-64 UniRef50_C9RA29 Transcriptional regulator, LysR family n=1 Tax=A... 249 1e-64 UniRef50_B2T4Q8 Transcriptional regulator, LysR family n=3 Tax=B... 249 1e-64 UniRef50_A6F002 Transcriptional regulator, LysR family protein n... 249 1e-64 UniRef50_B4SNU6 Transcriptional regulator, LysR family n=1 Tax=S... 249 1e-64 UniRef50_Q46SX0 Transcriptional regulator, LysR family n=4 Tax=B... 249 1e-64 UniRef50_A1K6J7 LysR-family transcriptional regulator n=5 Tax=Pr... 249 1e-64 UniRef50_Q46S95 Transcriptional regulator, LysR family n=2 Tax=B... 249 1e-64 UniRef50_A6ULR6 Transcriptional regulator, LysR family n=1 Tax=S... 249 1e-64 UniRef50_C4K9T0 Transcriptional regulator, LysR family n=1 Tax=T... 248 2e-64 UniRef50_C7NK10 Transcriptional regulator n=1 Tax=Kytococcus sed... 248 2e-64 UniRef50_Q0S956 Transcriptional regulator, LysR family protein n... 248 2e-64 UniRef50_UPI000174499E transcriptional regulatory protein, LysR ... 248 2e-64 UniRef50_C7QF45 Transcriptional regulator, LysR family n=1 Tax=C... 248 2e-64 UniRef50_C8NJC1 LysR family transcriptional regulator n=9 Tax=Co... 248 2e-64 UniRef50_A9AT14 LysR family transcriptional regulator n=11 Tax=B... 248 2e-64 UniRef50_Q2T4U0 Transcriptional regulator, LysR family n=2 Tax=B... 247 2e-64 UniRef50_D2R7I4 Transcriptional regulator, LysR family n=6 Tax=P... 247 2e-64 UniRef50_D1XD48 Transcriptional regulator, LysR family n=2 Tax=S... 247 3e-64 UniRef50_B8J696 Transcriptional regulator, LysR family n=3 Tax=A... 247 3e-64 UniRef50_A0QCY6 Transcriptional regulator, LysR family protein n... 247 3e-64 UniRef50_D2ATF2 LysR family transcriptional regulator n=2 Tax=Ac... 247 3e-64 UniRef50_Q46Q42 Regulatory protein, LysR:LysR, substrate-binding... 247 3e-64 UniRef50_B7RS97 Transcriptional regulator, LysR family n=1 Tax=R... 247 3e-64 UniRef50_A1W2B9 Transcriptional regulator, LysR family n=6 Tax=C... 247 3e-64 UniRef50_UPI00004DBCAD UPI00004DBCAD related cluster n=2 Tax=Xen... 247 3e-64 UniRef50_B1J4U2 Transcriptional regulator, LysR family n=2 Tax=P... 247 4e-64 UniRef50_Q12BP5 Transcriptional regulator, LysR family n=1 Tax=P... 247 4e-64 UniRef50_B3EA60 Transcriptional regulator, LysR family n=2 Tax=B... 247 4e-64 UniRef50_B4DCH5 Transcriptional regulator, LysR family n=1 Tax=C... 246 5e-64 UniRef50_Q39PG2 Transcriptional regulator, LysR family n=1 Tax=B... 246 6e-64 UniRef50_C7I0K1 Transcriptional regulator, LysR family n=1 Tax=T... 246 6e-64 UniRef50_A5FXN6 Transcriptional regulator, LysR family n=6 Tax=A... 246 7e-64 UniRef50_B4UKP3 Transcriptional regulator, LysR family n=4 Tax=A... 246 8e-64 UniRef50_A5V773 Transcriptional regulator, LysR family n=2 Tax=A... 246 8e-64 Sequences not found previously or not previously below threshold: UniRef50_B7IPY3 Transcriptional regulator, LysR family n=74 Tax=... 277 4e-73 UniRef50_A8FAC2 Possible LysR family transcriptional regulator n... 265 2e-69 UniRef50_B0C1S6 Transcriptional regulator, LysR family n=2 Tax=C... 256 6e-67 UniRef50_B2JUD8 Transcriptional regulator, LysR family n=12 Tax=... 256 7e-67 UniRef50_B5JV63 LysR protein n=1 Tax=gamma proteobacterium HTCC5... 255 2e-66 UniRef50_Q2RZH0 Transcriptional regulator, LysR family n=1 Tax=S... 253 7e-66 UniRef50_Q13T34 Transcriptional regulator, LysR family n=60 Tax=... 249 1e-64 UniRef50_Q3JWC0 LysR family regulatory protein n=26 Tax=Burkhold... 249 1e-64 UniRef50_Q12DG5 Transcriptional regulator, LysR family n=1 Tax=P... 249 1e-64 UniRef50_Q0RXH6 Transcriptional regulator, LysR family protein n... 249 1e-64 UniRef50_A9C046 Transcriptional regulator, LysR family n=2 Tax=c... 247 3e-64 UniRef50_A1VNR0 Transcriptional regulator, LysR family n=2 Tax=C... 247 4e-64 UniRef50_C3JEG8 Transcriptional regulator, LysR family protein n... 246 8e-64 >UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=Bacillales RepID=A9VF88_BACWK Length = 305 Score = 318 bits (817), Expect = 1e-85, Method: Composition-based stats. Identities = 72/301 (23%), Positives = 132/301 (43%), Gaps = 5/301 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 +++ Q+ F+ V+++ A+ LN+SQP+LS+ I+ LE + LF R K ++LT Sbjct: 7 ISIELRQLEYFLAVSKELHFTRAAEKLNISQPSLSQQIRALEHEVGMPLFDRIGKKISLT 66 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 +AG H+ I E+ A+ I+ G G + IG ++ L+P I F++Q+P Sbjct: 67 EAGRVLLSHSKTIFHEVEQARSAIQDLNGLHHGSLTIGSLLTVVNYLLPPAILDFNKQYP 126 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 +++ ++ + + +L Q ELD I D E L + + + H Sbjct: 127 NIELSVLGLRTGEIREKLLQNELDIGITFL--PVQDKEIVSIPLYKSELTLVVPTSHSLT 184 Query: 183 GA--RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 SI++L DY + + + ++ + P+ + T + I +VA+ Sbjct: 185 ERKYVSIEELQDYPLILLPKNFYLTELITSHCQNFNFKPKPILEISTMESLIQMVAQGMG 244 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 ++ LP+ D L + + + + P LI RRD T I Q + L Sbjct: 245 ITVLPKPYI-DFLQNEHIQAIKIENPTPTIDIGLIYRRDKYMCAATRKFIEQLKITVHSL 303 Query: 301 Q 301 Q Sbjct: 304 Q 304 >UniRef50_P39592 Uncharacterized HTH-type transcriptional regulator ywbI n=9 Tax=Bacillales RepID=YWBI_BACSU Length = 301 Score = 307 bits (789), Expect = 2e-82, Method: Composition-based stats. Identities = 61/290 (21%), Positives = 121/290 (41%), Gaps = 5/290 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I + F+EVAR S AS+ L +SQP +SK I+ LEE L +LF+R + V LTDA Sbjct: 1 MDIRHLTYFLEVARLKSFTKASQSLYVSQPTISKMIKNLEEELGIELFYRNGRQVELTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G S Y A I++ + ++ G + IG+ I P V+ F + +P V Sbjct: 61 GHSMYVQAQEIIKSFQNLTSELNDIMEVKKGHVRIGLPPMIGSGFFPRVLGDFRENYPNV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +++E + + + G LD + + F ++++ + P H Sbjct: 121 TFQLVEDGSIKVQEGVGDGSLDIGVVVL--PANEDIFHSFTIVKETLMLVVHPSHRLADE 178 Query: 185 RS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + +++L D + + ++ P + + +V+ + + Sbjct: 179 KECQLRELKDEPFIFFREDFVLHNRIMTECIKAGFRPHIIYETSQWDFISEMVSANLGIG 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQ 292 LPE + L + + ++P+ + + +I R+D + + + Sbjct: 239 LLPERICR-GLDPEKVKVIPLVDPVIPWHLAIIWRKDRYLSFAARAWLEH 287 >UniRef50_P77744 HTH-type transcriptional regulator abgR n=48 Tax=Enterobacteriaceae RepID=ABGR_ECOLI Length = 302 Score = 306 bits (786), Expect = 5e-82, Method: Composition-based stats. Identities = 302/302 (100%), Positives = 302/302 (100%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT Sbjct: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ Sbjct: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP Sbjct: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 Query: 181 AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF Sbjct: 181 AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL Sbjct: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 Query: 301 QS 302 QS Sbjct: 301 QS 302 >UniRef50_UPI00016945AE hypothetical protein Plarl_07755 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016945AE Length = 303 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 125/294 (42%), Gaps = 5/294 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I ++ F+EV R S A+ +L+++QP +SK I+ +E+ L L R +K V LTDA Sbjct: 7 LDIRHLKYFIEVVRCKSFTKAADVLHITQPTISKMIKNIEDELGVVLLDRSTKQVMLTDA 66 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+S A I++ ++ G+I +G+ + P +I FH ++P + Sbjct: 67 GQSILLQAQQIVKSFENLSIELANTIHLKKGKIRMGLPPMVGSRFFPHIIGEFHHKYPNI 126 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +++++E + ++ +G LD + F + ++ + P H G Sbjct: 127 EIQLIEEGAKKVEEQVEEGHLDIGVVLL--PIPSGTFDSFPFVHEKLMVVVYPKHRLAGQ 184 Query: 185 R--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++K+L + + + ++ E P+V + +VA +S Sbjct: 185 TVIALKKLEHEPFILFREGFVLHDRIPEECIRAGFQPKVVYESSQWDFISEMVAAGLGIS 244 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 LPE + L+ ++ +P+ E + +I ++ + I ++ Sbjct: 245 MLPESICR-ELNPNRVITIPLVEPSIDWSLAMIWPKEQYISYAVREWINFVKQR 297 >UniRef50_UPI0001745DD5 transcriptional regulator, LysR family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745DD5 Length = 290 Score = 298 bits (765), Expect = 1e-79, Method: Composition-based stats. Identities = 73/293 (24%), Positives = 125/293 (42%), Gaps = 5/293 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++HQ+R V VAR G+ A++ ++SQP+LS+ IQ+LE+ L +LF R + LT A Sbjct: 1 MELHQLRYMVAVARTGNFSRAAQTCHVSQPSLSQQIQKLEDELGERLFDRLRRHAKLTQA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE F A ILEE+ AA + R G+I +G+ +I+ L+P +I+ F ++P V Sbjct: 61 GERFLPRAVRILEEMDAATREARAANDLDQGRITVGVLPTIAPYLLPKLIAAFSAKYPGV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V + E + E+D I + D F +L +++ + H + Sbjct: 121 QVVVHEDTTARLRELTAACEVDIAIASL--PLQDERFEVRELFDEELLLALPNNHRLVDQ 178 Query: 185 RSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + I + LL+ + + Q+ Q PQV SLV ++ Sbjct: 179 KKIIPEDLLEEKFILMKEGHCLGDQVLHFCHRQDFHPQVSCRSAQMETVQSLVQSGMGIT 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 +P + V +S+ PK R A+ + Sbjct: 239 LVPRMALQED-RSVKPVYRSLSDPSPKRTIVAFWPRQRPLGKAAAAWLKLMEE 290 >UniRef50_P20668 HTH-type transcriptional regulator gltC n=17 Tax=Bacillales RepID=GLTC_BACSU Length = 300 Score = 297 bits (762), Expect = 3e-79, Method: Composition-based stats. Identities = 62/299 (20%), Positives = 123/299 (41%), Gaps = 4/299 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+R F+EVA + + A+ L+++Q A+S+ I LEE L LF R + + LT Sbjct: 1 MELRQLRYFMEVAEREHVSEAADHLHVAQSAISRQIANLEEELNVTLFEREGRNIKLTPI 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F H ++ + A+E I + G + IG S++ L+P VIS F +++P V Sbjct: 61 GKEFLIHVKTAMKAIDYAKEQIDEYLDPHRGTVKIGFPTSLASQLLPTVISAFKEEYPHV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + + +G +I +R ++D + + T + L ++ HP Sbjct: 121 EFLLRQGSYKFLIEAVRNRDIDLALLG-PVPTNFSDITGKILFTEKIYALVPLNHPLAKQ 179 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 +++ L + + + + + P V E A LV+ ++ Sbjct: 180 KTVHLIDLRNDQFVLFPEGFVLREMAIDTCKQAGFAPLVSTEGEDLDAIKGLVSAGMGVT 239 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQ 301 LPE + + +P+ K +I+ ++ P + L+ Sbjct: 240 LLPESTFAETTPRFTVK-IPIEFPQVKRTVGIIKPKNRELAPSANDFYEFVIQFFSKLE 297 >UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Bacillales RepID=C6IV95_9BACL Length = 305 Score = 296 bits (759), Expect = 6e-79, Method: Composition-based stats. Identities = 72/296 (24%), Positives = 134/296 (45%), Gaps = 4/296 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q++ FV+VAR+ + A+ L+++Q A+S+ I +LE+ L LF ++ + + LT Sbjct: 1 MELRQLQYFVKVARKEHVTQAAEELHVAQSAVSRQIHQLEQELGVNLFMQKGRNLHLTAV 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F +IL++L A ++ + G+I +G S+ ++P+V++ F + +P V Sbjct: 61 GQLFCSRVEMILKDLDRAVSEVHEFLDPEQGEIRLGFPNSLGIHMIPSVVAEFRKLYPNV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 K R +G ++I ++ GE+D + + T +L + PGHP G Sbjct: 121 KFRFRQGTYPTLIRDVVSGEVDLAFIS-PFPENHDQVTGNVVLTEDLVAILPPGHPLAGE 179 Query: 185 RS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 +S + QL D + + + S + + TP++ E LVA +S Sbjct: 180 QSIKLSQLKDEKFILFSKGYSLRPIVWHACLEAGFTPKIAFEGEETDTIRGLVAAGMGVS 239 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 LPE Q + + +SE LI R D + + S G Sbjct: 240 LLPEMALFQSFTLQPIRVR-ISEPKVTRTIGLIHRVDEKLPLVAQSFRMFLLEYFG 294 >UniRef50_Q1IRZ3 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRZ3_ACIBL Length = 296 Score = 294 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 71/296 (23%), Positives = 130/296 (43%), Gaps = 7/296 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++HQ+R F VAR G+ AS + +++QP+LS+ I +LE L A+LF R + LT Sbjct: 1 MEVHQLRYFCAVARHGTFTRASEVEHVAQPSLSQQILKLEAELGARLFDRLPRSAKLTVF 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++F +A IL +L A+ ++ + G++ +G+ +I+ L+P +++ +HP V Sbjct: 61 GKAFLPNAERILRQLDEAKTELLEMTSNEKGEVTVGIIPTIAAYLLPKLLNGLSVRHPDV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 V+I E ++ L G +D I E E+L E++F H Sbjct: 121 TVKISEDITPVLLQRLHDGSIDMAIAALPIPGT--ELASEELFEEKFYAVLPEKHRRASR 178 Query: 185 --RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 S+ L + + + + + A +P V F+ +++V+ +S Sbjct: 179 ASISLADLNREPFLLLKEGHCFRDSVIAACNQAAMSPSVVFESGQFATILAMVSAGMGVS 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 +P G +P+S ++ R Q L+ Q R CG Sbjct: 239 AVPAMAVQ---PHPGCKFIPISGKHSSRKVGIVTSRHHFQGRAQRLLLKQMRDACG 291 >UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepID=A9W9P6_CHLAA Length = 301 Score = 293 bits (752), Expect = 4e-78, Method: Composition-based stats. Identities = 71/291 (24%), Positives = 128/291 (43%), Gaps = 7/291 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R F VAR + A+ L+++QPALSK I +LE L LF R + + LT+A Sbjct: 1 MELRHLRYFEAVARHSHVTRAAAELHIAQPALSKQISQLERELGITLFDRVGRSLRLTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+ +A IL ++ A+ + +R G AG++ IG ++ L+P +++ FHQ++P + Sbjct: 61 GEALLPYARAILAQVEEARAAMAERIGLKAGRVTIGAPPTVGAHLLPPLLTIFHQRYPGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +R+ E + S+++ L G D + D + T LL + + HP Sbjct: 121 TLRLHEAGIQSLLDLLEAGITDLAVVAL--PVTDEQLTVTPLLNEPLVLIVSTTHPLARR 178 Query: 185 RSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + +L W + + + + TPQ + + VA +S Sbjct: 179 SEVMMTELRHERWILSPSSYELREATLKACREAGFTPQTVLEGGETETLVRFVAAGLGVS 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 +P +V L VS+ + L+ R D +P +L Sbjct: 239 LVPALAVAGCT---DVVRLTVSDQHLTRSLGLVWRSDRTASPAARALREFL 286 >UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CY97_PAESJ Length = 305 Score = 293 bits (751), Expect = 5e-78, Method: Composition-based stats. Identities = 76/299 (25%), Positives = 137/299 (45%), Gaps = 4/299 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+ FV+VA++ + A+ L+++Q A+S+ I +LEE L +LF ++ + + LT Sbjct: 1 MELRQLYYFVKVAKKEHVTQAAEELHVAQSAVSRQIHQLEEELGVKLFLQKGRNLQLTPV 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F + A +IL++L A +I + G+I +G S+ S++P V++ F + HP V Sbjct: 61 GQLFLKRAEVILDDLERAVVEIHEFMDPEKGEIRLGFPHSLGVSVVPQVVAAFRKLHPNV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 K R +G S+I ++ +GE+D + + E LL ++ P HP G Sbjct: 121 KFRFRQGMYPSLIRDMVKGEIDLAFIS-PFPDEHEQVCGEVLLTEELFAILPPSHPLAGE 179 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + I QL + ++ M + S + E + TP++G E LVA +S Sbjct: 180 QEIDLIQLKEDTFVMFSEGYSLRPIVWEACQEAGFTPKIGFEGEETETIRGLVAAGMGVS 239 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQ 301 LPE Q + V +I R + + + R L+ Sbjct: 240 LLPEMALYHAGVLQS-AKVRVRTPNVTRNIGIIHRSNEKMPLVAKVFHGFLLRYFNELE 297 >UniRef50_C6CYG5 Transcriptional regulator, LysR family n=2 Tax=Paenibacillus RepID=C6CYG5_PAESJ Length = 297 Score = 291 bits (745), Expect = 3e-77, Method: Composition-based stats. Identities = 58/290 (20%), Positives = 125/290 (43%), Gaps = 6/290 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q++ +++A + + A+ L+++QP+LS+ + +LE+ L LF R + V LT A Sbjct: 1 MELRQLQYVIQIAIEKNFSRAAEKLHIAQPSLSQQLSKLEQELGVLLFRRTTNSVELTQA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F + IL+ + ++++ G++ +G ++P V+ F + +PQ+ Sbjct: 61 GQVFVDKSQSILDAIEQLKQEMDDMAQMKRGRLVVGTLPITGSHILPLVLPVFGELYPQI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V ++E V + G D ++ T D +E L+E++ + P H G Sbjct: 121 EVILVEDTTVKLEQLTANGGTDISLLTL--PLVDQTLEWEPLMEEEICLAVPPSHRLAGR 178 Query: 185 R---SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 SI++L + + + + L L TP + SL+A + Sbjct: 179 TDEISIEELREEHFVGLKKGQGFRQILVHLCQQAGFTPNIVFESSNIETVQSLIAGGMGI 238 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLIT 291 + +P+ + V L + + P + R+ + + I Sbjct: 239 TFVPKMLTRAAGGDFVPVYLSLKD-RPSRTLIIASRKGRYLSKAAVAFIE 287 >UniRef50_C0ZCK2 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZCK2_BREBN Length = 295 Score = 290 bits (743), Expect = 4e-77, Method: Composition-based stats. Identities = 61/298 (20%), Positives = 126/298 (42%), Gaps = 5/298 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ QIR + VA + S A+ L+++QP+LS+ I +LE+ L LF R + V LTDA Sbjct: 1 MELRQIRYVLAVAEERSFSRAANRLHLAQPSLSQQIAKLEKILGVSLFHRLPQHVELTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F Q A +++ + ++R +G++ +G ++P V+ F +Q P V Sbjct: 61 GQRFIQVAQTLVDMSEGLEREMRAYAVGESGKLLVGSLPITGAYVLPRVLPTFTKQFPGV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++++ME + L +G++D ++ T D + ++ + HP Sbjct: 121 ELQLMEETSSHLEQLLVRGKIDVSLLTM--PISDPSLEIIPAINEEIFLAVPANHPLAKR 178 Query: 185 RS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + + ++ D + + + L + P++ SLVA LS Sbjct: 179 KEVDLAEVADQPFILLKEGQGFRTISLRLCEQAGFRPRIVFESSNIQTAQSLVAAGMGLS 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 P+ + P + + + P + R+D + + + + G + Sbjct: 239 FAPKMITLAPGTIEPPTYVRIK-TKPSRTLVVAYRKDKPLSRPAEAFVQCLIEQGGKI 295 >UniRef50_C6J455 LysR family transcriptional regulator n=2 Tax=Bacillales RepID=C6J455_9BACL Length = 307 Score = 289 bits (741), Expect = 8e-77, Method: Composition-based stats. Identities = 60/305 (19%), Positives = 129/305 (42%), Gaps = 9/305 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+ +++A + + A+ L+++QP+LS+ + +LE+ L +LF R + V LT A Sbjct: 1 MELRQLLYTLKIAEEKNFSRAADKLHIAQPSLSQQLSKLEQELGVKLFQRNTSTVELTYA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G SF HA I++ + ++++ AG++ +G L+P V+ F +P + Sbjct: 61 GASFIAHAQKIMDAVAQLRQEMDDISQLRAGRVVVGSMPITGSHLLPYVLPAFKASYPNI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V ++E +++ +G D + + ++E + E+ + P HP Sbjct: 121 QVTLLEDTSLNLEKLTAEGGTDL--SLLSLPLLEPTLSYEPIGEEIIDLAVPPDHPLTKT 178 Query: 185 RSI-------KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAK 237 + KQL + + + + K ++L + P V SLVA Sbjct: 179 PGVLEQGVEMKQLENEPFIVLKKGQGFRKMTADLCREAGFEPNVVFESNNIETVQSLVAA 238 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 ++ +P + LP++ P + R+ + + I F++ Sbjct: 239 GMGITLVPRFIARAKRSELIPAYLPLAAPAPSRTLVIAYRKGRYLSKAAEAFIETFKKTM 298 Query: 298 GYLQS 302 Q+ Sbjct: 299 EERQT 303 >UniRef50_D0YA85 Transcriptional regulator, LysR family n=5 Tax=Klebsiella RepID=D0YA85_KLEVA Length = 308 Score = 288 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 219/300 (73%), Positives = 256/300 (85%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 MAFQ+K H IRAFVEVAR+GSIRGASR L +SQPAL+K+I+ELEEGL+AQLF RRS+GV Sbjct: 7 MAFQIKFHHIRAFVEVAREGSIRGASRALAVSQPALTKAIKELEEGLSAQLFVRRSQGVA 66 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT+ GESFYQHASLILEELRAAQ+++ QRQG+ AGQINIG+GAS++RSLMP+VI RFHQQ Sbjct: 67 LTENGESFYQHASLILEELRAAQDELLQRQGEQAGQINIGLGASVARSLMPSVICRFHQQ 126 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 HPQVKVRIMEGQL++MINELRQGELDFTINTYY GPYDHEF+FEKL EK FA+F R GHP Sbjct: 127 HPQVKVRIMEGQLLAMINELRQGELDFTINTYYPGPYDHEFSFEKLFEKPFAVFARAGHP 186 Query: 181 AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 A A S+ +L+D+ WTMPTP GSY+KQL + L+ P+V +VCETFS+CISLV KSDF Sbjct: 187 AAQATSLGELMDHHWTMPTPRGSYFKQLQDRLNQAGLAPKVDIVCETFSSCISLVVKSDF 246 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 LS LP E+G DPL LVM+PV ++LP A YYLIQRRD+RQTPLTASLIT FRR+ L Sbjct: 247 LSILPVELGNDPLMADKLVMIPVRDVLPTATYYLIQRRDTRQTPLTASLITLFRRQSRQL 306 >UniRef50_C7I3E5 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I3E5_THIIN Length = 301 Score = 288 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 79/302 (26%), Positives = 135/302 (44%), Gaps = 11/302 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+R FV +A QGS A+ L++SQP LS I+ LE+ + A+L R ++GVTLT A Sbjct: 1 MELRQLRYFVTIAEQGSFSRAAERLHISQPPLSTQIKALEDEIGARLLERSNRGVTLTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +F++ +L +L A E +RQ + AG ++IG + ++P + F ++PQV Sbjct: 61 GAAFFEDIRSVLAQLEHAVERVRQAERGDAGTLSIGFVSIADFGILPPTLKSFRARYPQV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI-- 182 V++ E + I ELR ELD +I + TF LL++ + HP + Sbjct: 121 DVQLHELTTDAQIRELRAAELDLSIGL--APVDEPGLTFTPLLQEPLMLAAPTTHPVLQE 178 Query: 183 --GARSIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 GA ++ L + +P Y L P++ I LV+ Sbjct: 179 GSGAVDLRALAKEPFIVPPRNIGPGLYDLTLSLCQAAGFAPRITQHARQMQTVIGLVSCG 238 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 ++ +P + L G+ P+ ++Q + PL + R Sbjct: 239 MGVALVPASL--RQLKRPGVQYRPLLGQPATIELGILQLSQTS-NPLRDNFNQALREAAL 295 Query: 299 YL 300 +L Sbjct: 296 HL 297 >UniRef50_UPI00016C47B2 transcriptional regulator, LysR family protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C47B2 Length = 291 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 70/296 (23%), Positives = 126/296 (42%), Gaps = 10/296 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELE---EGLAAQLFFRRSKGVTL 61 +++HQ+R FV VA GS A+ +++QP LS+ I LE G+ +LF R + V L Sbjct: 1 MELHQLRYFVAVAETGSFTRAAEREDVTQPTLSEQIMRLESKPHGVGRRLFDRLGRKVVL 60 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 TDAG HA IL ++ A+ +R G + +G +I+ L+P ++RF + H Sbjct: 61 TDAGRELLGHAQGILAAVKEAERAVRDSAEG--GSLRVGAIPTIAPFLLPGTVTRFRKDH 118 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P V++++ E ++ +L GELD + D EKL + + H Sbjct: 119 PNVQLQLKEDLTERLLADLLAGELDVALMAM--PVRDDRLHVEKLFAEPLVMALPAKHEL 176 Query: 182 IGARS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 + +L+ + + + Q+ L P+V E +++VA Sbjct: 177 ASKTEVKLADVLEEPFILLDDMHCFGDQVLSLCHRGGLEPRVVCRGEQIVTLLAMVAAGQ 236 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 +S +PE + P+ + P + + + P +L+ +R Sbjct: 237 GVSIVPEMAATADT-SKQCAYRPLGKPTPVRTLCAVWHKQRFRPPSLRALVDMAKR 291 >UniRef50_D2P368 Transcription activator of glutamate synthase operon GltC n=18 Tax=Listeria RepID=D2P368_LISMO Length = 295 Score = 286 bits (734), Expect = 5e-76, Method: Composition-based stats. Identities = 66/291 (22%), Positives = 132/291 (45%), Gaps = 4/291 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q++ F+EVAR + AS L+++Q A+S+ I +LEE L LF R + + LT Sbjct: 1 MELRQLKYFMEVARVEHMTKASENLHVAQSAVSRQITKLEEELGVHLFDRVGRNMQLTSV 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F + A++ L EL+ A+ + + G + +G+ S+S ++P+VIS F +++PQ+ Sbjct: 61 GQDFLKQAAIALNELQKAEALVTEYTDPAKGTVRVGLPNSLSTKVLPSVISTFREKYPQI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG- 183 + MEG + L G LD T + + + +++ + HP Sbjct: 121 TYQFMEGTNEELTEMLLSGVLDMTFLS-PVPESSEQIEAIRFFDEKLKLIVPKTHPLAEN 179 Query: 184 -ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 S+K+L + + YK +++ + + PQ+ F LV +S Sbjct: 180 FTVSLKELASEKFVLYPEDFDLYKIVTKAANKKGFEPQIAFQSRDFYTIQGLVGAGLGIS 239 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 LPE + + + + + + + + +I + +P + Sbjct: 240 ILPEMILDGAIFKET-KSIALRDKELRRSVGIITTKKRNLSPSENLFRSFI 289 >UniRef50_Q3M2K4 Transcriptional regulator, LysR family n=5 Tax=Cyanobacteria RepID=Q3M2K4_ANAVT Length = 298 Score = 286 bits (732), Expect = 9e-76, Method: Composition-based stats. Identities = 66/301 (21%), Positives = 130/301 (43%), Gaps = 10/301 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFR-RSKGVTLTD 63 +++ +R F+ VA + A+ L+++QP LS+ IQ+LE L +LF R + V LT+ Sbjct: 1 MELRHLRYFIAVAEELHFSKAAERLHIAQPPLSQQIQQLEAELGVELFQRKTKRQVQLTE 60 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 AG+ F Q A + +L A + ++ GQ+ +G + ++ L+P ++ +F +Q + Sbjct: 61 AGQVFLQEAYQLFAQLSKAIDLTQRTGRGEKGQLRVGFTSLVTYDLLPVILRQFREQFLE 120 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V++ + E L + + D+ F E + ++ + H Sbjct: 121 VELVLQELTTTQQEQALFDRRIHVGFA--HPPLEDNTFNQECIHQEGLIVAMLVTHFLAR 178 Query: 184 AR--SIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 S+++L D ++ M Y Q+ L +P+V + I LV+ Sbjct: 179 QENISVRELKDENFIMFPRYLGPGLYDQILSLCQQGNFSPKVTIEAIQMQTIIGLVSGGM 238 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 ++ +P + L G+V + E P ++ R++ TP+ + R C Sbjct: 239 GIAIVPSSL--QNLQRAGVVYRTLDEKTPLVETAVVWRQED-MTPVLREFLQIVRSVCVE 295 Query: 300 L 300 L Sbjct: 296 L 296 >UniRef50_Q04778 HTH-type transcriptional regulator alsR n=87 Tax=Bacillus RepID=ALSR_BACSU Length = 302 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 113/292 (38%), Gaps = 9/292 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ ++ F+ VA + A+R LNM+QP LS+ I++LEE + L R + V LT A Sbjct: 1 MELRHLQYFIAVAEELHFGKAARRLNMTQPPLSQQIKQLEEEVGVTLLKRTKRFVELTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE F H + L ++ E ++ G + IG S + +P ++ + ++ P V Sbjct: 61 GEIFLNHCRMALMQIGQGIELAQRTARGEQGLLVIGFVGSATYEFLPPIVREYRKKFPSV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 K+ + E EL +G +D I + E + HP Sbjct: 121 KIELREISSSRQQEELLKGNIDIGI--LHPPLQHTALHIETAQSSPCVLALPKQHPLTSK 178 Query: 185 RS--IKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 S I+ L D + Y + + P + + I LV+ Sbjct: 179 ESITIEDLRDEPIITVAKEAWPTLYMDFIQFCEQAGFRPNIVQEATEYQMVIGLVSAGIG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQ 292 ++ +P L + + +I A + + R+D+ PL I Sbjct: 239 MTFVPSSA--KKLFNLDVTYRKMDQIQLNAEWVIAYRKDNH-NPLIKHFIHI 287 >UniRef50_Q1IHL3 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IHL3_ACIBL Length = 306 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 71/303 (23%), Positives = 132/303 (43%), Gaps = 9/303 (2%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M ++++ +R FV VA + A+ L+++QP LS+ I++LEE L LF R S+ V Sbjct: 1 MDNEIELRHLRYFVAVAEELHFGRAAARLHLAQPPLSQQIKKLEEILGYALFTRTSRAVK 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT AGE F + A L +R E++R G + +G S +++PA+ R+ + Sbjct: 61 LTSAGEVFLERAQRTLRHVREDMEEVRSIGRGEVGYLRVGFIGSSMLTVLPAIFGRYRRA 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 +P+V +++ E ++ L + LD I G H T E+L + F HP Sbjct: 121 YPKVNLQLQESYTSGVVEGLLKATLDAGI--LRDGGPTHGLTVERLYSEPFVAVLPGKHP 178 Query: 181 AIGARSI--KQLLDYSWTMPTPHGS--YYKQLSELLDDQAQTPQVGVVCETFSACISLVA 236 R++ + L D + P+ S Y++ + + P+V + + LV Sbjct: 179 LAKQRALSPRALKDEPFVFYPPYSSKLAYEKPVSICEAHGFRPKVVQEAPQWLTILRLVG 238 Query: 237 KSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 +S P + + + +V +P+ ++ L R + + + R Sbjct: 239 AGLGVSIAPACV--ERIAAPDVVCIPLRGAAVRSDIELAFREGEGR-EIVRAFAEIVRDG 295 Query: 297 CGY 299 + Sbjct: 296 FAH 298 >UniRef50_B5JN19 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JN19_9BACT Length = 296 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 82/298 (27%), Positives = 143/298 (47%), Gaps = 4/298 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ QIR+F VA + R A+ LN++QPALS +++LEE L QLF R +GV LTDA Sbjct: 1 MELRQIRSFRVVAAEEHFRRAAEKLNIAQPALSLQVRQLEEELGTQLFERVGRGVRLTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G F+ +A I+ + + E R+ + G++ IG+ + + PAVIS F +++PQV Sbjct: 61 GSLFWDYADRIVSLVDESAEATREHSDLIRGRLRIGIAQTPNCCFGPAVISAFKRRYPQV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 V + E + + L +GELD I + E + E++F GHP Sbjct: 121 FVSLAELAADEIESSLLKGELDLGIGF--GPCDSPNLSSESIYEERFVALAPRGHPWFNK 178 Query: 185 R--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + S+K L + T + + DD + +V + T I+ + + S Sbjct: 179 KNISLKTLAQEELILLTRDYCTRRIFEKTCDDLDVSLKVAIEMNTIEGIIASLESTGLAS 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 LP ++ PL L +P+++ + L+ R+ +P ++ T+++ L Sbjct: 239 VLPAQIVNSPLMSPTLRSVPIAQPGIRRKVALVYRKSGYLSPAAHAMATEWKTLAKSL 296 >UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=Geobacter RepID=B5EGJ2_GEOBB Length = 300 Score = 284 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 68/297 (22%), Positives = 130/297 (43%), Gaps = 8/297 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + Q+R F+EVA+ + A+ L+++QPA+S ++++LE+ L LF R+ K V+LT Sbjct: 1 MDVRQLRYFIEVAKVKNFTKAAEALHIAQPAVSMAVKKLEQELELSLFNRQDKKVSLTAE 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE F HA IL++LRAA+ ++ + +G G++ +G+ IS P +I F + +PQ+ Sbjct: 61 GEIFLPHAKRILDDLRAAELEMAELKGLSKGEVRLGIPPMISAYFFPDIIRDFKKSYPQL 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + ++ + + QGELD + G + + L ++ I P HP Sbjct: 121 HLSVLGEGAWRIQKMIGQGELDMGVVA--GGNFPETLEVRRFLREEIVICVPPDHPFAQR 178 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 +S+ + + + E+L P + FS SLV +S Sbjct: 179 KSVSLVEFIREPLVFYKEGYYIREFFLEVLKGAGSAPNIVFETNLFSLVKSLVRNGTGIS 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 + LV +P + + ++D+ + + + + Sbjct: 239 IFLRMVVAADT---DLVAVPF-DPPLHLDLLIAWKKDTYLSLANRAFVDFLLQHAAE 291 >UniRef50_C5BDD2 HTH-type transcriptional regulator AlsR n=2 Tax=Edwardsiella RepID=C5BDD2_EDWI9 Length = 330 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 68/310 (21%), Positives = 114/310 (36%), Gaps = 14/310 (4%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M +++I ++ F+ VA + A+ LN+SQP LS+ IQ LE L A L R ++ V+ Sbjct: 16 MVMRIEIRHLKYFIAVAEERHFNRAAERLNISQPPLSQQIQSLERELGACLLMRTNRSVS 75 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAV---ISRF 117 LT AG F + I+ +L A E + G + IG +S+ +P V + + Sbjct: 76 LTQAGSLFLKECYSIVGQLEQAAEKAARAHRGETGDLTIGFTSSV--PFIPRVAHSLFSY 133 Query: 118 HQQHPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRP 177 ++PQV +++ E I L G+LD I L + Sbjct: 134 RHRYPQVHLQMRELNTKQQIEPLVDGKLDIGI--LRNTLLPGVLKHRVLQREPLVAVLHR 191 Query: 178 GHPAIGA---RSIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACI 232 HP L D + + + Y +L LL P + + Sbjct: 192 HHPLAQRGQALRFSDLADQPFVFFSRGDGTALYDELLSLLKRAGIVPYITQEVGEAMTIV 251 Query: 233 SLVAKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQ 292 L++ +S LP + G+ + E +L R + +LI Sbjct: 252 GLISAGLGVSILPASYTR--IQVDGVCYRALDEPDAYTEVWLAYHRQRPLSAQATALIAL 309 Query: 293 FRRECGYLQS 302 L + Sbjct: 310 LTAPSSNLIA 319 >UniRef50_C0ZI27 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI27_BREBN Length = 307 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 63/293 (21%), Positives = 123/293 (41%), Gaps = 7/293 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+ F+ + + AS L SQ LS+ I+ LE L LF R K +TLT+A Sbjct: 1 MELRQLEYFMAICEEMHFSRASEKLCTSQSNLSQQIKFLENELGVPLFDRLGKRITLTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ + + + + A+E I + G + IG+ + L A++ FH+ +P+ Sbjct: 61 GKVLLEQSRHVFSHIDYAREAIAAMKNNEGGTLTIGVLPGDADLLFDALLVEFHRLYPKT 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + ++E ++ ++ GE+D + + D T L ++FA+ HP Sbjct: 121 SLSVIE--STRIVEQITSGEIDLGVTVLPEP--DERITVIPLFHEEFALAVHRAHPLAKE 176 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++IK QL + M P + ++ + Q + T + +SLV K Sbjct: 177 KAIKFGQLQEVKMVMFPPDHQARQLINRYCIQEGFRLQPHIETTTLQSQLSLVKKGIGGC 236 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 LP + ++ + ++ + P L+ R+D + I + Sbjct: 237 ILP-SLLLQNVNDDEIAIINLLHPTPSQDICLVYRKDKYMGFAARTFIDTLQA 288 >UniRef50_A9WGB3 LysR substrate-binding n=2 Tax=Chloroflexus RepID=A9WGB3_CHLAA Length = 304 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 71/293 (24%), Positives = 126/293 (43%), Gaps = 7/293 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+R F+ VA +G I A+ L +SQPALS+ I+ LEE + LF R + + LT A Sbjct: 1 MELRQLRYFLAVAEEGHITRAAEKLYISQPALSQQIKLLEEEIGTVLFDRIGRRIRLTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE HA L+EL AQ I + G G + IG+ +++ LMP +++ F +P + Sbjct: 61 GEILVAHARRALQELSEAQVAIDELNGLQRGMLRIGVVQTVNAYLMPDLVAAFTNAYPAI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG- 183 ++I E + L G+L I P T E+L + + HP Sbjct: 121 SLQIEELATRDIEQRLADGDLQIGIGFV--PPETAGVTGEELFSEDLVVVVSRQHPWADL 178 Query: 184 -ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++ L + + + P+V + T + ++ V + + Sbjct: 179 PQLPVQSLHQQPLILLSTTFCTRRLWDRCTHIAGIQPRVQIEMNTIGSILAAVRQLTLAT 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 LP + LV +P+ + P+ L+ R ++ + T + + R Sbjct: 239 VLPAMVLSGQ---PDLVGIPLVDPTPRRTVGLLFRHNAYRCAATRAFVAMTRA 288 >UniRef50_Q46MA3 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46MA3_RALEJ Length = 296 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 66/298 (22%), Positives = 123/298 (41%), Gaps = 9/298 (3%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M + + +R F+ +A + + A+ L+++QP LS I++LEE + L R + V Sbjct: 1 MDIVMDLRHLRYFIAIAEELNFTRAAERLHIAQPPLSMQIRQLEEEMDVTLLNRTRRHVE 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT+AG F + A IL A ++ G++ +G S +L+P ++ + ++ Sbjct: 61 LTEAGRIFLEQARQILRATERAVVQAQRAHRGETGRLTVGFFEHTSYTLLPPILRAYRER 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P V++ + +V LR+G+ D I+ P E T+E +LE+ F + HP Sbjct: 121 FPSVEILLRWFPVVKQAEALRRGDAD--ISFMRPVPDLEEVTWETILEEPFVLAVPARHP 178 Query: 181 AIGAR--SIKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVA 236 A S+K+ + M P ++ + P+V + LV+ Sbjct: 179 LANAESISLKKCAQEPFVMYIPEMAPDFHAMNMRMCASAGFVPKVISEVGQVYTLLGLVS 238 Query: 237 KSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 + +P + + +V P+ P L TPL + I + Sbjct: 239 SGAGIGFVPASV--RKVKFDHVVYKPIEGRQPTIEIMLGY-SQRTPTPLMTAFIETAK 293 >UniRef50_P37499 Uncharacterized HTH-type transcriptional regulator yybE n=4 Tax=Bacillales RepID=YYBE_BACSU Length = 292 Score = 280 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 122/297 (41%), Gaps = 7/297 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ Q+ F +AR + A++ L+++QPALS+SI LE L LF R+ + ++L Sbjct: 1 MEWEQLEYFQTLARMQHVTKAAKSLSITQPALSRSIARLENHLGVPLFDRQGRSISLNQY 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G F + +++E +E+I+ G +++G ++ +L+P +I F Q++P + Sbjct: 61 GHIFLRRVQAMMKEYTEGKEEIQALLKPDQGVVSLGFLHTLGTTLVPDLIGSFQQEYPNI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + ++ L+ G+LD + + + KL ++ +F HP Sbjct: 121 SFQLKQNHSYWLLERLKSGDLDLCLLASIKPENP--IQWIKLWSEELFVFVPNDHPLASR 178 Query: 185 RS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 S + ++ + + + + EL + P + E + VA +S Sbjct: 179 ESITLNEIAGERFILLKKGYALRMTVDELFEKANIQPNIMFEGEEATTAAGFVAAGLGIS 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 LP+ L + + VS + + + +P+ + Sbjct: 239 ILPDL---KGLDQSKITKIRVSWPECQRVIGIAWIKGRFLSPVAETFKQYVISHFSE 292 >UniRef50_P27111 HTH-type transcriptional regulator cynR n=108 Tax=cellular organisms RepID=CYNR_ECOLI Length = 299 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 72/298 (24%), Positives = 136/298 (45%), Gaps = 7/298 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I F+ VA GS A+ L++SQPALS+ I++LEE L LF R + + LTDA Sbjct: 1 MLSRHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE + Q+AS L+EL A + I G + I + + + + +++ F+ ++P + Sbjct: 61 GEVWRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI-- 182 +++ E + + L + ELD I + E LL + A+ HP Sbjct: 121 TLQLQEMSQEKIEDMLCRDELDVGIAF--APVHSPELEAIPLLTESLALVVAQHHPLAVH 178 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++ +L D + + + +Q+ + PQV + + SA + L+ ++ + Sbjct: 179 EQVALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLST 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 LP + GL + ++ L + L++R++S QT + + +C + Sbjct: 239 LLPAAIAT---QHDGLKAISLAPPLLERTAVLLRRKNSWQTAAAKAFLHMALDKCAVV 293 >UniRef50_C2BX95 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2BX95_LISGR Length = 297 Score = 280 bits (717), Expect = 6e-74, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 128/293 (43%), Gaps = 4/293 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q++ F+EVA + AS L+++Q A+S+ I +LEE L +LF R + + LT Sbjct: 1 MELRQLKYFMEVASFEHMTQASENLHVAQSAVSRQITKLEEELGIKLFDRVGRNMQLTTV 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE F + EL A+ + + G + IG+ S++ ++PAVIS F ++P V Sbjct: 61 GEDFLNQVKVAYNELLKAEAIVTEYSDPTKGSVRIGLPNSLASKVLPAVISAFRAEYPDV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +EG + L GE+D T + D K +++ + HP Sbjct: 121 TYHFVEGSNAELKQLLLDGEIDITFLS-PVPVTDDSVEAVKFFDEKLKVIFPATHPLADR 179 Query: 185 --RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 S+++L + + P+ +K ++ + +A + + + F LV +S Sbjct: 180 YNVSLEELAAEKFILYPPNFDLFKIVTTAAEKKAISLDIAFQSQDFYTIQGLVGAGLGIS 239 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 LPE + + LP+ + + L+ + + +P ++ Sbjct: 240 ILPEMILDGTIFKDT-KALPLRNKELRRSVGLVVTKKRQLSPTEKLFYQFIKK 291 >UniRef50_Q5WCI6 LysR family transcriptional activator of glutamate synthase n=6 Tax=Bacillales RepID=Q5WCI6_BACSK Length = 301 Score = 279 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 56/299 (18%), Positives = 119/299 (39%), Gaps = 4/299 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++I Q+ F+EVA++ + A+ L+++Q A+S+ I LE L LF R + V LT Sbjct: 1 MEIRQLLYFMEVAKREHVTEAAAALHVAQSAVSRQIFNLESELGVDLFIREGRRVKLTPI 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F + + + A+ ++++ G I + S++ +P I F +Q+P+ Sbjct: 61 GKIFLERIKHAMNVIDDAKREVQEYLDPKKGTIRVAFPISLAAYTLPTAIYAFRKQYPEA 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 K ++ +G +I+ + +G+ + + + + T L ++ HP + Sbjct: 121 KFQLKQGLYRELIDGVIKGDYNMALIG-PVPMEEKKITPRILFAERIVALLPIHHPLAKS 179 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 I L + + + + + + PQ+ + A LV+ ++ Sbjct: 180 AEINLLDLKNDPFVLLPEGFVFRDLVINACSEIGFVPQIAFEGDDIDALKGLVSAGLGVT 239 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQ 301 +PE D + +P+SE +I + P + L Sbjct: 240 LMPEVTLVDNTPRSTVK-IPLSEPNVTRTVGVITPTERGLLPTEELFYEFLQEFFTKLN 297 >UniRef50_Q65GU9 Transcriptional regulator YbbE n=2 Tax=Bacillus subtilis group RepID=Q65GU9_BACLD Length = 299 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 62/293 (21%), Positives = 120/293 (40%), Gaps = 7/293 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++++QI F+ V+R A+ +SQPALS+SI++LEE L LF R++K + LT Sbjct: 1 MELYQIDHFIAVSRHKHFTKAALEQRISQPALSRSIKKLEEELGVPLFIRKTKSIRLTKY 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE F A L + IR+ AG+I++ ++ LMP +I+ F +++P V Sbjct: 61 GEQFLIKAKQARLALDEGVQQIRESVNPNAGEISVSFLHTLGSRLMPQLIAEFKKKYPNV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 R+ + + + + GE D ++ + + L + + HP Sbjct: 121 AFRLYQAANEHLQHMVETGEADICLS--SPPLPNEHLEWTVLDTEPLYLVLPADHPLADR 178 Query: 185 RS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + I+ + + P ++ + +P++ E S + LV+ ++ Sbjct: 179 KEVAIRSIAHEDFVCFKPGYGLRYVFDQMCRGLSISPKLAFEGEEVSTILGLVSAGLGVA 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 LP+ + VS+ + L +D +P + Sbjct: 239 ILPKTA---EHVHSPVAFCRVSDYRSERTIGLAVLKDHYLSPAARNFKEFVIE 288 >UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Proteobacteria RepID=B9JIM7_AGRRK Length = 306 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 68/295 (23%), Positives = 117/295 (39%), Gaps = 5/295 (1%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M+ +I +RAF V S A+ L++SQPAL++ IQ+LE+ + A L R ++ V Sbjct: 1 MSINCEILDLRAFQAVVELESFHRAAEALHISQPALTRRIQKLEQSIGAPLLDRTTRHVA 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 T G+ +LEE + I+ Q G I + + + +P VI F + Sbjct: 61 PTATGQEMIPLVRRMLEEFDGSLFAIKDSGSQRRGLITMACVPTAAFYFLPTVIRTFGRD 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 +P +++RI + + + +GE++F IN D + +FE L++ F + R HP Sbjct: 121 YPHIRLRIRDLTANEGLQAVARGEVEFGINLMGN--SDPDLSFEPLIDDPFVLAMRKDHP 178 Query: 181 AIGARSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 I QL + + L L + + LV Sbjct: 179 LAAFDEIHWNQLEGHPLVVVDRSSGNRTLLDAALARANLRLNWFYEVTHLNTSLGLVEAG 238 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 +S LP LV P+ + +++RR + +P I Sbjct: 239 LGISVLPRLATPQE-EHPFLVTRPIVNPVVTRTIGIVRRRSATLSPAADRFIDML 292 >UniRef50_A4F7Y9 Transcriptional regulator, LysR family n=3 Tax=Actinobacteria (class) RepID=A4F7Y9_SACEN Length = 333 Score = 278 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 62/297 (20%), Positives = 132/297 (44%), Gaps = 10/297 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R FV +A + S+ A+ L+++QP LS +++LE L A L R ++G LTDA Sbjct: 1 MELRHLRYFVAIAEEQSLTRAAARLHIAQPPLSAQLRKLETELGAVLVHRTARGTQLTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + A IL E+ A + R+ G++++G S S ++P ++ +F ++P+V Sbjct: 61 GRVLLEEARRILHEVDHAAQMTREAGSGRVGRLSLGFIPSASNVVLPPILRQFKARYPEV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++R+ E + ++ L +D +Y D + + + HP + Sbjct: 121 RLRLREMRPDEIVERLHDRRIDAGF--FYLPIDDPSLHVRSVADDSLVLALPSTHPLADS 178 Query: 185 RS--IKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGV-VCETFSACISLVAKSD 239 ++ + + +P + Y +++ + TP+V + LVA Sbjct: 179 PEVDLRAVAGEPFILPPRYDMPGLYTSVTQACERAGFTPRVVQPDVWLMQTIVGLVAGGM 238 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 ++ +P + + G +P++++ A + RR+ TP+ S + Sbjct: 239 GIAVVPSSV--QQIPRAGATFVPLTDVSATARMAMAWRREIG-TPVLRSFLDIAAAA 292 >UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=Actinomycetales RepID=C7PVI0_CATAD Length = 297 Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 114/296 (38%), Gaps = 5/296 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ HQ+R F+ VA A+ L+++QP+LS+ I+ LE L A LF R +TLTDA Sbjct: 1 MQFHQLRYFIAVAETRHFTRAAEALHVTQPSLSQQIRALEHELGADLFLRARGNITLTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+ A IL + AA+ ++++ G + +G S+ L+P V+ +H+++P + Sbjct: 61 GEALLPMARRILADADAARREVQELAELRRGHVRLGATPSLCTGLLPDVLRTYHRRYPGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG- 183 ++ + E ++ +L +G LD + T E+LL + + P P G Sbjct: 121 QLLVQESGSHDLVRDLARGALDLALVVLPLPSPSPALTTEELLREDLVVVSAPNLPPPGD 180 Query: 184 --ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 I L M Q P + A + + Sbjct: 181 GRQVRIADLEHEQLIMFRHGYDLRDLTVAACRAQGFEPVFAIEGGEMDAVLGFARAGLGV 240 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 + +P + + L + P++ L R D Sbjct: 241 AIVPSMVAQN--VDPSLRVTPIAPPALHRTIALAHRTDVALPRAAQEFRRTLLERT 294 >UniRef50_Q3MEY8 Transcriptional regulator, LysR family n=1 Tax=Anabaena variabilis ATCC 29413 RepID=Q3MEY8_ANAVT Length = 295 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 65/295 (22%), Positives = 125/295 (42%), Gaps = 9/295 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R FV +A + A+ L+++QP LS+ I++LE L LF R + V LT+A Sbjct: 1 MELRHLRYFVTLAEELHFGKAAERLHIAQPPLSQQIRQLEIELGFDLFHRTKRTVRLTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F IL++L+ A + + GQ+ +G +S + +++P ++ F P V Sbjct: 61 GQVFLGEVQQILQQLQQAIQLGQTSSRGEVGQLIVGFVSSAAYNILPIILRNFRACTPAV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 K+ + E + LR+G +D I ++ F +E + ++ + H Sbjct: 121 KLELHEMTTDQQLEWLREGGID--IGFIRPPVEENIFNWETIFQESLMVALPETHLLANQ 178 Query: 185 --RSIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + L + S+ + Y + L +P V +SLVA Sbjct: 179 FNIPLTSLGNESFILFPRKIAPGLYDLIISLCQQAGFSPHVAQEAIQMQTTVSLVAADMG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 ++ +P + L G+V + E K A + R++ +P + R Sbjct: 239 IAIVPASL--QNLQRTGVVYKNIQEATAKVALAMTWRKNET-SPTLQRFLHTVRA 290 >UniRef50_B4WMZ4 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WMZ4_9SYNE Length = 289 Score = 277 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 72/290 (24%), Positives = 121/290 (41%), Gaps = 9/290 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + Q+ F+ VA + A++ LNM+QP LS I++LE L QLF R + V+LT A Sbjct: 1 MNLRQLNYFLAVANELHFGQAAKRLNMAQPPLSMQIKQLESDLDVQLFERTQRKVSLTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE + A ILE + A+ +Q GQ+ I +S S++P IS F Q +PQV Sbjct: 61 GEVLKKEAEQILERIEVARRKTQQADRGETGQMAIAFVSSAMYSILPPWISAFRQSYPQV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI-- 182 + E + I+ L ++D D + + + + + GH Sbjct: 121 ALTFQEATGLEQISGLLSHQIDIGFVR--PPIEDVSISDKVVWREPLVVALPEGHRLSTH 178 Query: 183 GARSIKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 A SI L + + Y ++ + +P + + + LVA + Sbjct: 179 KAISISSLEQEPFILIQRPLASEMYDKIISFCQQASFSPNITQTAQQLQTILGLVAANLG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLI 290 ++ LP L G+ P E P +I R+D + L + + Sbjct: 239 IAILP--TAAQKLQRAGICYRPFIETTPAVELVMIWRKDET-SRLRENFL 285 >UniRef50_Q1ATU8 Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ATU8_RUBXD Length = 301 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 67/298 (22%), Positives = 123/298 (41%), Gaps = 7/298 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R FV VA + A+R L++ QP LS IQ LE L AQLF R + V LT+A Sbjct: 1 MELRHLRYFVAVAEELHFGRAARRLHIVQPTLSAQIQRLEAELGAQLFHRTKRSVRLTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++F A L LE A + R+ G++++G S + S++ V+ + +++P V Sbjct: 61 GKAFLVEARLALEHSERAVREARRMAASETGRLDVGFVPSATYSVLTDVVGLYRRRYPGV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI-- 182 + E + L +G ++ E + +Q GH Sbjct: 121 DLVPREMHSSVQVEALLEGSIEVGFLRLPSDHESDELEVRPFVREQLVAVLPRGHRLASL 180 Query: 183 GARSIKQLLDYSWTMP--TPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 ++ L S+ +P Y++QL E+ P+V ++L A + Sbjct: 181 RRVPLEALAGESFLIPRREREPGYHEQLLEVCGTAGFVPKVAQETTELQVGMALTATGGY 240 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 + P + G+V ++E +P+ + + +P T + + G Sbjct: 241 VGLFPAS--TRHVKMTGVVFKRLAEPVPEMELSVAWQSG-ELSPATRAFLGICEEVSG 295 >UniRef50_B7IPY3 Transcriptional regulator, LysR family n=74 Tax=Bacillales RepID=B7IPY3_BACC2 Length = 300 Score = 277 bits (710), Expect = 4e-73, Method: Composition-based stats. Identities = 58/302 (19%), Positives = 119/302 (39%), Gaps = 12/302 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q++ F VAR + A+ L+++QP+LSK+I LE+ L LF R+ + +TL Sbjct: 1 MELLQLKYFQTVARLEHMTKAAEELHIAQPSLSKTIARLEKDLGVPLFDRQGRQITLNSF 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F + I EL + +I+ G I + + ++P ++ F ++HP V Sbjct: 61 GKVFLKRVERIFHELSEGEREIKDLAELQQGSITMAVS---IPRILPELLGSFLREHPNV 117 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + + SM +L E+DF +++ E +E L+ ++ + GH Sbjct: 118 RFQQFLASTPSMKRQLENMEIDFCLSSV--PVEGEEIVWEPLITEEIFLVVPSGHRLSNR 175 Query: 185 RS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 S + ++ D + + E + TP + + + L+ + ++ Sbjct: 176 ESIHLHEVKDEPFISMNTGYGFRHLTDEFCKEAGFTPHIAFEVDEPTVISDLIKQGLGIA 235 Query: 243 KLPEEMGCDPLHGQGLVM--LPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 +P L L L + E K L + + + Sbjct: 236 FVPNLTL---LKNSTLAANKLRIIEPACKRTIGLSWSKKRYLSKTAQQFREFVIDYFSNI 292 Query: 301 QS 302 ++ Sbjct: 293 RT 294 >UniRef50_A3I8L6 Transcriptional regulator, LysR family protein n=1 Tax=Bacillus sp. B14905 RepID=A3I8L6_9BACI Length = 292 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 61/293 (20%), Positives = 129/293 (44%), Gaps = 7/293 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++I + F+ V + A+ L +SQP LS+ I+ LE+ L LF R K + +T+A Sbjct: 1 MEIRHLHYFMAVCEELHFTKAAEKLGISQPTLSQQIRVLEDELGMPLFDRIGKKIVVTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + +A+ +L L+ + I+ Q GQI +G+ S + ++ FHQ+ P+V Sbjct: 61 GALLFTYATAMLNTLQNVKGAIKDLQEVQGGQIRVGIMPSDLDYRITQLVIDFHQKFPRV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 K+ I + ++ ++ + E+D I T + L ++++ + HP Sbjct: 121 KLTI--LASIDIMRQVLENEVDIGIGTNVEP--HDRLVIIPLRKEEYVVTVSKEHPWAHR 176 Query: 185 --RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 +I +L D M + + E + + + ++ ++LV + + Sbjct: 177 EAVTIAELKDLPLVMYPEGFLGREIVEETVKKHGFQLHTILETSSVTSIMNLVRANIGAT 236 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 P + ++ L ++ +++ +P + +I R D + T + I Q + Sbjct: 237 VQPYPLIQQ-MNDSDLRIIRLTDTIPSRSLSIIYRVDRYVSHATTAFIEQIKA 288 >UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AG49_CARHZ Length = 297 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 69/297 (23%), Positives = 123/297 (41%), Gaps = 7/297 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + +Q+ F VA + S A+R+L++SQPA+S IQ LEE +L R +K VTLT A Sbjct: 1 MNRNQLEIFRVVAEKKSFSEAARLLHISQPAISMHIQALEEYYGTKLLDRTTKRVTLTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE Y++ +L + AQ DI Q G + G++ +G +I ++P ++S F++++P V Sbjct: 61 GEILYKYTLHLLSLMDKAQRDISQAAGIIKGKLILGASLTIGGHVLPPLLSSFYRKYPDV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI-- 182 + + ++ + LD E E L + + HP Sbjct: 121 NITMEIMNTEKVLERVSDLTLDLGFV--EGEVTTGELHVEALARDELVVVVAANHPLAGR 178 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQ---TPQVGVVCETFSACISLVAKSD 239 G S ++L M P K + E L ++ + + A V Sbjct: 179 GRISWEELATLPLVMREPGSGTRKVIEERLQAAGFKLPELKIVMELGSTEAIKGAVEAGL 238 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 + L + ++ L + + +Y++ + +P T +LI R Sbjct: 239 GAAILSKWTVRREINWGIFKQLLIENLPIYREFYVVLNNNKFHSPATQALIQFCREH 295 >UniRef50_B9XBB1 Transcriptional regulator, LysR family n=2 Tax=Verrucomicrobiales RepID=B9XBB1_9BACT Length = 299 Score = 276 bits (708), Expect = 5e-73, Method: Composition-based stats. Identities = 73/293 (24%), Positives = 122/293 (41%), Gaps = 9/293 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ IR FV VA + S R A+ L+++QP LS I++LE L +LF R ++ V LT + Sbjct: 1 MELRHIRYFVAVAEELSFRRAAERLHLAQPPLSAQIKDLEGELGTKLFERTTRSVRLTAS 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G F A +L A++ +R+ + L G + IG+ A + S + ++ + Q P V Sbjct: 61 GRVFLDEARAVLAAAEKAEQRVRKAEHGLVGTLRIGVLAPTATSRLATILRSYRNQFPGV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + + E V + LR +LD + E F L E + GH Sbjct: 121 QFSLHEMTSVEQLQSLRLDQLDVGL--LRPPVAFPELDFHFLEESPMVLAVPAGHRLAKQ 178 Query: 185 R--SIKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 R K + M P YY L TP VG + + L++ Sbjct: 179 RLIEWKDFHNEPMVMIHPSLQHGYYDTFLNLCAKAGSTPIVGQYANDVHSKMWLISAGFG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 ++ P + GLV + LP ++ +R + +P+ + I F Sbjct: 239 VA--PTTKTIAEVKRPGLVFRELPPGLPLVQTLIVWKR-TNNSPMVGNFIECF 288 >UniRef50_P77559 Uncharacterized HTH-type transcriptional regulator ynfL n=179 Tax=Gammaproteobacteria RepID=YNFL_ECOLI Length = 297 Score = 276 bits (708), Expect = 5e-73, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 115/296 (38%), Gaps = 9/296 (3%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 +++ +R FV VA + A+ LN+SQP LS+ IQ LE+ + A+L R ++ V LT Sbjct: 1 MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQIGARLLARTNRSVLLT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISR-SLMPAVISRFHQQH 121 AG+ F + IL + A + AG++ IG +S + +S F + + Sbjct: 61 AAGKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSSAPFIRAVSDTLSLFRRDY 120 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P V ++ E I L +G LD + ++ + HP Sbjct: 121 PDVHLQTREMNTREQIAPLIEGTLDMGL--LRNTALPESLEHAVIVHEPLMAMIPHDHPL 178 Query: 182 IGAR--SIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAK 237 ++ +L + P Y + L+ TP + I LV+ Sbjct: 179 ANNPNVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYHLTPVITQEVGEAMTIIGLVSA 238 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 +S LP L+ + +P++E + +L+ + Q+P + Sbjct: 239 GLGVSILPASFKRVQLN--EMRWVPIAEEDAVSEMWLVWPKHHEQSPAARNFRIHL 292 >UniRef50_C9KJ25 Transcriptional regulator GltC n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJ25_9FIRM Length = 307 Score = 276 bits (708), Expect = 5e-73, Method: Composition-based stats. Identities = 65/287 (22%), Positives = 135/287 (47%), Gaps = 9/287 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q++ F +A+ A+ + +SQ ALS+SIQ+LE+ L LF R + LT+A Sbjct: 1 MELTQLKYFQAMAKCHHFTQAAEEMAVSQSALSRSIQKLEQELGVTLFERHGRTSELTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F H ++ EL A+++I + AG +++ S+ + +P ++ +FH+++P + Sbjct: 61 GQKFLFHVDRVIRELALAEQEI-ELDNGGAGVVHLSFLHSLGDTFLPLILRQFHERYPHI 119 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG- 183 V++ + + +L GE D + + + + + L ++ + HP Sbjct: 120 DVKLNQQNSSMLSEQLTSGETDICLCSTMN---EPDTAWMYLWSEEMFLVVPEDHPLAQK 176 Query: 184 -ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 +++++ D + P + +Q+++ LD PQ+ + +S VA +S Sbjct: 177 SRVNLREIEDEPFVALKPEYTLRQQVNQFLDLAESHPQIVFEGDEVHTLVSFVAAHLGVS 236 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASL 289 LP + L G+V +P+S L K A + +P + Sbjct: 237 ILPHVPCTEHL---GVVFVPISFPLCKRAVGIAWNTSRPLSPAAMTF 280 >UniRef50_P0ACQ6 Hydrogen peroxide-inducible genes activator n=273 Tax=cellular organisms RepID=OXYR_ECO57 Length = 305 Score = 276 bits (708), Expect = 5e-73, Method: Composition-based stats. Identities = 63/294 (21%), Positives = 111/294 (37%), Gaps = 4/294 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I + V +A R A+ ++SQP LS I++LE+ L L R S+ V T A Sbjct: 1 MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G A +L E++ +E Q+ ++G ++IG+ ++ L+P +I HQ P++ Sbjct: 61 GMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKL 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + E Q ++ +L G+LD I + F L ++ + HP Sbjct: 121 EMYLHEAQTHQLLAQLDSGKLDCVILALVKE--SEAFIEVPLFDEPMLLAIYEDHPWANR 178 Query: 185 --RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + L M Q + + ++VA ++ Sbjct: 179 ECVPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGIT 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 LP G+V LP + P+ L+ R S L R Sbjct: 239 LLPALAVPPERKRDGVVYLPCIKPEPRRTIGLVYRPGSPLRSRYEQLAEAIRAR 292 >UniRef50_C1M4D9 Putative uncharacterized protein n=2 Tax=Citrobacter RepID=C1M4D9_9ENTR Length = 302 Score = 276 bits (708), Expect = 6e-73, Method: Composition-based stats. Identities = 67/304 (22%), Positives = 116/304 (38%), Gaps = 9/304 (2%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 +++ +R FV VA + A+ LN+SQP LS+ IQ LE+ + A+L R ++ V LT Sbjct: 1 MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQILEQQVGARLLARTNRSVALT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISR-SLMPAVISRFHQQH 121 AG+ F + IL + A + AG++ IG +S + +S F Q + Sbjct: 61 SAGKQFLADSRQILGLVNEAAARAERLHLGEAGELRIGFTSSAPFIKAVSDTLSLFRQSY 120 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P V ++ E I L +G LD + E +L + HP Sbjct: 121 PAVHMQTREMNTREQIAPLNEGTLDLGL--LRNTQLPETLEREIILHEPLMAMIPRAHPL 178 Query: 182 IGAR--SIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAK 237 ++ +L + + P Y + L+ P + I LVA Sbjct: 179 AQKPVVTLAELANEPFVFFDPHVGTGLYDDILGLMRRYGLKPTIAQEVGEAMTIIGLVAA 238 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 +S LP L+ + +P++E + +L+ + Q+ Q Sbjct: 239 GLGVSILPASFKRVQLY--EMCWIPIAEEDAVSEMWLVWPKHHEQSHAAQRFREQLLAAV 296 Query: 298 GYLQ 301 + Sbjct: 297 QAIN 300 >UniRef50_Q1AYT0 Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AYT0_RUBXD Length = 293 Score = 276 bits (708), Expect = 6e-73, Method: Composition-based stats. Identities = 64/298 (21%), Positives = 131/298 (43%), Gaps = 9/298 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ IR FV A + A+R L+++QP+LSK + LE L +LF R + V LT+A Sbjct: 1 MELSHIRYFVAAAEELHFGRAARRLHVTQPSLSKRVAGLERELGVRLFHRTRREVRLTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE F + A +LE+ A E+ R+ G++ IG + ++P ++ +H++ P+V Sbjct: 61 GEIFLEGARRVLEDALRAAEEARKAGRGELGRLEIGFFSPAIYGVLPEILKEYHERFPEV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V + E + +R+G+++ I + F E + + GHP Sbjct: 121 RVTLHEWTSSVQLERMREGKIE--IGFMRAPVEEAGFVTEHVFVEPVVAALPEGHPQARR 178 Query: 185 --RSIKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 S ++L D + M + + + + +P++ A + LVA Sbjct: 179 EVVSPRELADEPFIMVPRSKEPNSFDRYVSICQRAGFSPKITQEVFEIHAIVGLVATGMG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 ++ + + L G+V P+ + + +++R +P+ + + + Sbjct: 239 VAFVQGSVA--NLKRPGVVYRPLDDPEARIGTAIVRRSSRP-SPVLRTFLETLQAFVA 293 >UniRef50_C8WUA0 Transcriptional regulator, LysR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WUA0_ALIAD Length = 298 Score = 276 bits (707), Expect = 6e-73, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 118/294 (40%), Gaps = 9/294 (3%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 ++ Q+ FV VA + A++ L ++QP LS+ IQ+LE+ + LF R ++ V LT Sbjct: 1 MDTELRQLEYFVAVAEELHFGRAAKRLGLTQPPLSQQIQKLEDEIGVTLFDRTNRRVQLT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 AG + A +L ++ A + R G++++ S + +P VI + ++HP Sbjct: 61 HAGRVLLEEARKVLAHVQTAVKAARDAAAGRVGRLSVAFVGSATYGWLPEVIRAYQERHP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 V++ + E + + L GELD + + + HP Sbjct: 121 DVELVLREMSTPAQMEALTAGELDVGVLRL--PAQHPDLHVRLVERDDCVAVVPSEHPLA 178 Query: 183 GARS--IKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 S + +L + + + + Y L P+V + + LVA Sbjct: 179 TRSSLFLVELAEEPFVLVSRAIWPGLYDGFITLARALGFEPRVRLEVTEVQTAVGLVAAG 238 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQ 292 +S +P + +H + + L + P + RR +PL A+ + Sbjct: 239 LGVSIVPS--ATERVHRRDVRYLHIDGQSPTVELGVAWRR-RDTSPLVAAFLAM 289 >UniRef50_B8K739 Transcriptional regulator, substrate-binding of LysR family protein n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8K739_VIBPA Length = 297 Score = 275 bits (706), Expect = 8e-73, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 122/293 (41%), Gaps = 10/293 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + ++ F ++A+ G+ A+ L ++Q ALS SI++LE+ L +L R + ++LT Sbjct: 1 MDLKRLHYFNQLAKTGNFTKAADQLGIAQSALSTSIKKLEQQLGLKLVNRTERQMSLTAE 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ +HA +ILE++ A++++++ +G +G I G A ++ +P + +F + +P + Sbjct: 61 GQVLLRHAKIILEDVEQAEKELQELKGLTSGVIKFGAPAMLASYFLPDALEQFKKAYPGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ I E ++ L GELD + + L + Q A HP Sbjct: 121 QINIHEAGTATLAQMLVNGELDLALIR--GDREHEQIRQSLLAQDQIAACVPISHPFAKR 178 Query: 185 --RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL- 241 ++ + + + ++ TPQV S+V + + Sbjct: 179 SAITLDEFCQQPLVLFKNGYFLRETVNSYCQQNKLTPQVHFETNLPELLKSMVRRQVGIG 238 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 + LP + D L +P + + + + + + + Sbjct: 239 TCLPILVADD----PELKAIPF-DPPIPLQLGIGWKSSHYLSTAAKAFVDFLQ 286 >UniRef50_Q1AVR3 Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVR3_RUBXD Length = 305 Score = 275 bits (706), Expect = 9e-73, Method: Composition-based stats. Identities = 78/297 (26%), Positives = 131/297 (44%), Gaps = 9/297 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+R FV VA + S GA+R L +SQP LS I+ LE L +LF R ++ V LTD+ Sbjct: 1 MELRQLRYFVAVAEEQSFGGAARRLRISQPPLSLQIKALERELGVRLFDRNTRRVMLTDS 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +F + A +ILEE+ A+E + + L G++ +G +S + SL+P I F ++ V Sbjct: 61 GRAFLERARVILEEVERAKETAKGAERGLLGKLEVGFVSSATLSLLPPAIRLFRERFGGV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA--I 182 ++ + E I+ L GE + E + E++ + GHP + Sbjct: 121 ELELRELTSAQQIDALYNGETRVGLVRL--PLRAPGIHLEPVFEERLVVALPSGHPLEAL 178 Query: 183 GARSIKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 S++ + D T + Q+ EL P V + LVA Sbjct: 179 DRVSLEAIADLPLIFFTRQLIPGLHAQIIELFQRVGAFPNVAQHAVHLQTIVGLVASGVG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 +S LP + +G+V LP+ E + L + L + ++ R Sbjct: 239 ISILPSSAMR--VRREGIVYLPLDEDDATSWLGLAWVEGDD-SVLVENFVSIVREVA 292 >UniRef50_C6D9U9 Transcriptional regulator, LysR family n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6D9U9_PECCP Length = 294 Score = 275 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 67/296 (22%), Positives = 120/296 (40%), Gaps = 8/296 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ IR F+ VA + A+ LN+ QP LS+ IQ LE L LF R + V LT+A Sbjct: 1 MEFRHIRYFIAVAEELHFTRAAVRLNIGQPPLSQQIQSLEAELGVLLFERTRRSVRLTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGAS-ISRSLMPAVISRFHQQHPQ 123 G+ F A ILE ++++ AG++ I ++ + + + F ++P+ Sbjct: 61 GQHFLIRAREILESSEGVASELQRISRGEAGELKISFTSTGLLVEELRTPLRTFRAKYPE 120 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V++ + E L GELD + T + + + HP G Sbjct: 121 VRLTLKEMFTHLQFAALLAGELDIGCVRFNGPRAPDGLTLRWIRNDRLCLVLPDDHPLAG 180 Query: 184 ARSIK--QLLDYSWTMPT--PHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 + ++ D + S ++ + P V I LVA Sbjct: 181 RTDVGIVEVRDEPFIGYPAKAGASVSDYVTMCCEQAGFIPNVTQEAREAMTQIGLVAAGM 240 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 ++ LP+ M D L +G+ +P+S+ + L+ R +S +P + + R+ Sbjct: 241 GVAILPQPM--DQLQPKGVCFIPLSDAGAQLRMALVTR-ESDNSPRVRNFVDLVRQ 293 >UniRef50_C6D0W9 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D0W9_PAESJ Length = 296 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 119/291 (40%), Gaps = 7/291 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++I Q+ F + + A+ L ++QP +S I++LEE L LF R K + LT+A Sbjct: 1 MEIRQLEYFQAICDELHFTRAADKLGITQPTMSYQIKQLEEELGVPLFHRIGKKIALTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G H+ I + A+E+I + G + IG L+ ++ FH ++P + Sbjct: 61 GFILLNHSRNIFRSIDGAREEISELHHMERGSLTIGTLIGEINDLVSGLLVDFHNKYPGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +++ L +++ L Q ELDF + + D F+ L E++F P G Sbjct: 121 SIKL--LALEDVVDPLLQDELDFAVTIF--PVDDDRFSKVSLYEEEFYFVAHSNSPLSGE 176 Query: 185 RS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 S I++ + M + + + + + + +SLV S Sbjct: 177 PSVTIEEAMKEPIIMFPKTHRCRQLIDTVCSMHGVAWEPVIETSAIKSILSLVQSGAGAS 236 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 L + + Q ++M+P+S + + +D T + + Q Sbjct: 237 ILSKTLLELY-PDQNMIMIPISNPSLRREVGIAYLKDRYIGKATIAFMKQL 286 >UniRef50_B5JQV8 LysR substrate binding domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQV8_9BACT Length = 300 Score = 274 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 6/296 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++HQ+R F+ VA G+ A+ +SQP+LS I +LE L +LF R + LT A Sbjct: 1 MELHQLRYFLAVAEAGNFTRAAEKCFVSQPSLSAQIIKLEGELGQKLFNRLGRRAELTRA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G A IL E+ A+ I++ + + G + +G+ S++ L+P VI +++P + Sbjct: 61 GTFLESRARTILMEVENAERQIKENEEDIRGIVKVGVTPSVTPYLIPPVIRMCRERYPNL 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI-- 182 ++ I E +I+E++QG L+ I++Y E +L++ + H Sbjct: 121 EINIQENLRRRLIDEVQQGHLEVAISSYTG--DAANIDAEPILQEDLVLAVSKTHRLATQ 178 Query: 183 -GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 SI+ D + + ++ + D P+V +C + +V + Sbjct: 179 KSKVSIEDFKDEPLVLLGESATLGDKVFDFFDKMNIEPKVVALCSQVRSVKEMVNLGLGV 238 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 + LP + L +V + K + + +P + R Sbjct: 239 AILPAMAKEEHLPF-EIVYRSLVSERMKRLLFALTHSRRYLSPGARVFVDLIREVA 293 >UniRef50_C6BXQ9 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BXQ9_DESAD Length = 301 Score = 274 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 67/295 (22%), Positives = 123/295 (41%), Gaps = 8/295 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ Q++ F+ VA + A++ L +SQP LS+ I++ E+ L +LF R + V LT A Sbjct: 1 METRQLKYFLAVAEELHFGRAAKRLFISQPPLSQQIKKFEDELGVKLFQRNKRSVALTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G S + A I+ + A+ ++ GQ +G + + +I F Q+P V Sbjct: 61 GVSLLRDAPGIMRAIGRAKSNLLDAATGEGGQFTLGYIGPALETTLTEIIRDFKGQYPSV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + E + +R G++D I ++ + E + +A+ GHP Sbjct: 121 RLDLREMFTTDQLKAIRSGDIDAGIVRLFRHDVS-DLERELFHRESYALVVPDGHPLADR 179 Query: 185 --RSIKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + +L + Y + + + P V SA ++LVA + Sbjct: 180 AAVDVSELAGEQFIFFPREGQPRLYDEWMRVFSEAGFVPDVVQEATRKSATVALVAANMG 239 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 + +PE M + QG+V +S P LI R + P + I R+ Sbjct: 240 IGIVPESMAR--IKPQGVVFKRLSGDFPVIEMSLIYRSTNGF-PAVDNFIAAVRQ 291 >UniRef50_A6UMN5 Transcriptional regulator, LysR family n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UMN5_SINMW Length = 296 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 66/299 (22%), Positives = 122/299 (40%), Gaps = 9/299 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ ++++V VA + A++ LN+SQP L+K IQ+LE L LF R + V LT A Sbjct: 1 MEHRLLQSYVAVAEELHFGRAAKRLNISQPPLTKQIQQLERELGVALFERTKRKVELTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + A +L + A E +R+ + G + +G + SL+P V+ F + +P V Sbjct: 61 GSVLLEEARRLLRQTENAAELVRKTERGETGHLAVGFIDAAIYSLVPNVVECFTRSYPHV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 V + + ++ + + +G LD + + + E +L + + H Sbjct: 121 TVELADLRIPDQVRGVSEGRLD--VGFIHPPIRGEQLAIETVLVEPLVVAVPQRHRLASR 178 Query: 185 --RSIKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + +L + + + Y ++ L P++ I LV+ Sbjct: 179 AEIPLAELANEALIQFPRSINPTLYDEIIGLCQSSGFNPKIVREATPKQTIIGLVSVGLG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 +S LP + + L G+ P+S +I R D P T + I R Sbjct: 239 VSLLPRCL--ENLKRDGVAYRPISGPNLSIDTSIIYRSDR-LRPATKAFINVVRTVARE 294 >UniRef50_C7I2X4 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I2X4_THIIN Length = 313 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 69/296 (23%), Positives = 117/296 (39%), Gaps = 8/296 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + +R FV VA + A++ L++SQP LS+ IQ LE L LF R GV T A Sbjct: 1 MDLRHLRYFVAVAEERHFTRAAQRLHVSQPPLSQQIQALETELGVPLFTRGRGGVQRTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRS-LMPAVISRFHQQHPQ 123 G++ A IL+ + A RQ G++ +G S+ + +MP ++ F PQ Sbjct: 61 GDALLPLARSILDAVEHAVAQTRQVGRGETGRLAVGFAGSMPFTDVMPRLLRDFRAAWPQ 120 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V + + E S I++L LD Q +D + + + HP Sbjct: 121 VALDLREQPSQSQIDDLLAHRLDLGFIRTTQLMHDPRLSTLVVQREPLLAALHADHPLAA 180 Query: 184 ARSIK--QLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 S++ L D + + + +Q L P + I L++ Sbjct: 181 RASLRLNDLRDQPFVIYSASLGAGLRQQTLALCAQAGFNPHIAQEVHEMPTLIGLISAGL 240 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 + + M L + P++++ L+ RRD Q P + I Q + Sbjct: 241 GVGIVAASMQRAQL--PWVAYRPLADVQASTEVLLVWRRDDPQPP-LRNFIAQAKA 293 >UniRef50_D1VD43 Transcriptional regulator, LysR family n=1 Tax=Frankia sp. EuI1c RepID=D1VD43_9ACTO Length = 361 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 62/301 (20%), Positives = 108/301 (35%), Gaps = 7/301 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 V++ Q+ FV VA A+ ++++QP+LS I+ LE L + LF R +TLT A Sbjct: 19 VQLQQLAYFVAVAETKHFTRAAARVHVAQPSLSAQIRALETELGSPLFNRARGNITLTAA 78 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+ A IL + A+ ++++ G + +G S+ ++P V+ F Q++P + Sbjct: 79 GEALLPLARKILADADMARREVQELTDLRRGTVRVGATPSLCTGMLPEVLRLFRQRYPGI 138 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP---A 181 ++ + EG ++ EL G LD + D LL + + P P Sbjct: 139 QLLVEEGGSRDLVGELAVGALDLALIILPLQGSDPALATAPLLREDLVVISSPDGPPPVR 198 Query: 182 IGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 +++ L D M P + A V + Sbjct: 199 TAQMAVEDLRDRPLVMFRRGYDLRDFTVGACRAAGFEPTFAIEGGEMDAVCGFVMAGLGI 258 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQ 301 + +P + L P + L RRD L Sbjct: 259 AVIPSMVAFRQP----LRTTPFAAPGLHRTIGLAHRRDVEPPRAARELRATLVDFVANAA 314 Query: 302 S 302 + Sbjct: 315 A 315 >UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=Q122V6_POLSJ Length = 307 Score = 273 bits (700), Expect = 5e-72, Method: Composition-based stats. Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 6/303 (1%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 + Q++ FV VA +GS R A+ +N+S PALS+ I +LE L A+LF R ++ V L Sbjct: 3 RINFDLQQLQGFVAVAERGSFRAAAEHINLSSPALSRRIDKLETILGARLFNRTTREVEL 62 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T G F + A L++L +A I G++ + S + +P V+S F Q + Sbjct: 63 TPLGRVFLERARTALDDLESAMLGIADIATHRGGRVTVACVPSAALYFLPTVVSNFSQHY 122 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P ++VR+++ + ++ + GE DF I E FE + F + R HP Sbjct: 123 PGIRVRVVDETMNQVLQSVLSGESDFGIGFMNTLV--PEIAFESIHNDPFVLAMRREHPL 180 Query: 182 IGARS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 +S + S + L + L P + + +V Sbjct: 181 ARHKSVNWADVEKESLIAVARSSGNRQLLDDSLTKAGLNPSFAFEVSHVATLLGMVEAGL 240 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 L+ +P LV LP+ + L+ R + P RR Sbjct: 241 GLAAVPRMALASTHAT--LVGLPLRQPQTVRRVGLLTRHGVKLRPAAEMFHQHLRRALKT 298 Query: 300 LQS 302 +S Sbjct: 299 RKS 301 >UniRef50_C9YBM2 Putative uncharacterized protein n=2 Tax=cellular organisms RepID=C9YBM2_9BURK Length = 309 Score = 273 bits (700), Expect = 5e-72, Method: Composition-based stats. Identities = 79/304 (25%), Positives = 140/304 (46%), Gaps = 10/304 (3%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 ++ +++ Q+R FV VA + A+ L+MSQP LS+ I++LEEGL LF R + V Sbjct: 9 LSMRLETRQLRYFVAVAEELHFGKAAVRLHMSQPPLSQQIRQLEEGLGVTLFERTQRSVK 68 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT AG+ F A L +L A + +R AG + G A+ + +++P+V+ F Q+ Sbjct: 69 LTYAGQVFLAQARNALSKLEEAVDVVRAAARGEAGFLRCGYTAASAYAVIPSVMHAFKQR 128 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 +P V+V + E ++R+G LD + + + EKL+E+ + HP Sbjct: 129 YPLVEVALRESLSGDQYRDIREGRLDIGLVRPFG--ALPDLATEKLIEENLIVAIPSEHP 186 Query: 181 AIGAR--SIKQLLDYSWTMPTPHGS--YYKQLSELLDDQAQTPQVGVVCETFSACISLVA 236 R I L + + +GS ++ + LL + P++ A I+LV+ Sbjct: 187 LAQQRIVDIHDLQSQPFVGFSSYGSQYFHDMVENLLGGEKVVPKLVQRATQPHAVIALVS 246 Query: 237 KSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAA-YYLIQRRDSRQTPLTASLITQFRR 295 L+ +P+ +H +V P+ +L RR++ +PL ++ R Sbjct: 247 AGLGLAIVPDASAR--VHMDRVVYRPLHASRLPRPELHLCWRREN-ISPLISNFKASARE 303 Query: 296 ECGY 299 Sbjct: 304 VAAQ 307 >UniRef50_B1ZUQ0 Transcriptional regulator, LysR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUQ0_OPITP Length = 301 Score = 273 bits (699), Expect = 6e-72, Method: Composition-based stats. Identities = 62/295 (21%), Positives = 129/295 (43%), Gaps = 6/295 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++++Q+R V VA G+ A+ N++QP+LS+ I LE+ + +LF R + LT+A Sbjct: 1 MELYQLRYAVAVADTGNFTRAAERCNVTQPSLSQQIINLEKEVGHKLFHRLGRRAVLTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G F + A I+ ++ A +++ +I +G +++ L+ +I ++ P + Sbjct: 61 GAVFIERARQIVYDVENAAKELSDHPSLDR-RITVGAIQTVAPYLLLPMIEVCKRELPNL 119 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ ++E V +++ + +G+LD I T D + E L+ + + HP Sbjct: 120 QINLIEDFRVDLVHGVVEGDLDLAIVTL--PVDDPRVSVEPLMTEPLLLVVGKNHPFATR 177 Query: 185 R--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + SI L D ++ + Q+ P+VG C + +LVA +S Sbjct: 178 KEISINDLADETFVTMGESSTLAAQIRSFFGGHNFQPKVGYRCAQVATLKTLVAMGLAIS 237 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 LP + + + L L ++ P +++ Q+ + + Sbjct: 238 ILPR-VDQEEKDRETLTYLRLTGSAPTRELVVVRHLQRYQSRGAQQFLQLLHEQV 291 >UniRef50_B5WR38 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=B5WR38_9BURK Length = 309 Score = 272 bits (698), Expect = 8e-72, Method: Composition-based stats. Identities = 70/301 (23%), Positives = 122/301 (40%), Gaps = 10/301 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R FV VA + A+ L + QP LS IQ LE + A LF R S+GV LT+A Sbjct: 1 MELRHLRYFVVVAEELHFTRAAERLGIGQPPLSLQIQRLERDIGATLFRRLSRGVELTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGM-GASISRSLMPAVISRFHQQHPQ 123 G +A IL + D+++ G + +G GA+ L+PA+I + +HP Sbjct: 61 GVLLLDNARHILALVDRTCTDVQRLSRGEIGHMRVGFAGATYFLPLVPAIIREYRTRHPD 120 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V + + S+++ L +G +D E E L+++ + HP Sbjct: 121 VVLSPEQSNTPSLVDGLLEGRVDAAFIR-PPIVSADELDVELLVKEDMVVVLPHSHPLAR 179 Query: 184 A---RSIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 A + L + ++ + Y ++ P++G + LV Sbjct: 180 AGEPVPLSALAEETFLLFPRAIGAGLYDAITSACQRAGFLPRLGQEAPQIVSIAPLVGAG 239 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 +S +P + +V LP++ PKA L RR + +P+ R Sbjct: 240 FGVSIVPRS--TTQIQTDEVVYLPIAGNAPKAPISLAWRRHNP-SPVVRLFRAVAREMAR 296 Query: 299 Y 299 Sbjct: 297 E 297 >UniRef50_Q2J7C4 Transcriptional regulator, LysR family n=22 Tax=Actinomycetales RepID=Q2J7C4_FRASC Length = 316 Score = 272 bits (697), Expect = 9e-72, Method: Composition-based stats. Identities = 63/302 (20%), Positives = 118/302 (39%), Gaps = 11/302 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++HQ+ FV VA A++ ++++QP+LS+ I+ LE+ L LF R ++LT A Sbjct: 1 MQLHQLAYFVAVAETRHFTRAAQRVHVAQPSLSQQIRALEQELGTPLFNRARGNISLTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+ A IL + A++ + + G + +G S+ +P V+ FHQ++P + Sbjct: 61 GETLLPLARRILTDTETARQRVTELLDLRHGTVRLGATPSLCTGFLPDVLRLFHQRYPGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP--AI 182 ++ + EG ++ +L G LD + D L+ + + P Sbjct: 121 RLLVEEGGSRDLVRDLAAGSLDLALIILPLQSSDPALATSPLIRESLVLVSSLDEPPIVA 180 Query: 183 GAR-SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 G ++ L ++ M + + P + A + VA Sbjct: 181 GRPLTVADLRNHPMVMFRRGYDLREATVTACREAGFEPIFAIEGGEMDAVLGFVAAGLGS 240 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLT----ASLITQFRREC 297 + +P + H G+ + P + L +RRD T L R Sbjct: 241 AVIPSTVA----HRLGMRVTPFVLPGLQRTIGLARRRDVEPTRAAVELQRVLWEYLRDAA 296 Query: 298 GY 299 Sbjct: 297 AS 298 >UniRef50_B9Y467 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y467_9FIRM Length = 309 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 69/293 (23%), Positives = 130/293 (44%), Gaps = 6/293 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + +R FVEV R GSI A+ L++SQPA+S +I++LE+ LF R SK + LT++ Sbjct: 1 MTLRHLRIFVEVCRTGSITKAAESLHLSQPAVSLAIRQLEDYYGILLFDRISKKLYLTES 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +AS I+E + ++ AG + IG S ++P ++ RF+ + PQ+ Sbjct: 61 GNKMLSYASHIIESFDDMETQLKNWDS--AGTLRIGSSISTGTQMLPQLVRRFNLRFPQI 118 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + +++ + +++ +LD + Y + + + P HP Sbjct: 119 RTQVLIDNSRIIEDKVLTNQLDLALV--ESLSYSPDIVCVPFYTDRLIVITAPKHPLTQN 176 Query: 185 R--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++K L DY + P + + LL + + I+ V ++ +S Sbjct: 177 PECTVKALADYPVLLREPGSGTREVVDALLVTAEVQITPLWESTSTRSIINAVKENIGIS 236 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 LP E+ + + + LP++ LP +I R+ TP + I + Sbjct: 237 ILPYELVKNEIQSGAVAGLPLASPLPNRTCSIIHHRNKYLTPSAQAFIEVCQE 289 >UniRef50_Q7W9G9 Probable LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W9G9_BORPA Length = 296 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 74/299 (24%), Positives = 126/299 (42%), Gaps = 9/299 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R FV VA A+ L + QP LS IQ+LE + L R+ +GV LT+A Sbjct: 1 MELRHLRYFVAVAEDLHFTRAAARLGIGQPPLSLQIQQLEREIGTPLLLRQPRGVALTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRS-LMPAVISRFHQQHPQ 123 G F Q A +L A E R+ G I +G AS +P+ I + ++P Sbjct: 61 GARFLQDARAVLHAAELAVETARRLGHGEQGDIAVGFTASAVFHPYLPSAIRAYRDRYPG 120 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V++ + E +++ LR GE+D D EF E++L++ + P HP Sbjct: 121 VRIALSESNARALLAGLRSGEVDVAFVR-PPYALDDEFASERVLDEPMLVALPPDHPLCR 179 Query: 184 ARS--IKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 R+ + L + + + Y + + TP+V ++ ISLVA Sbjct: 180 KRTVPVAALAEQDFVLYPRPIGAGLYDAIMQACQRAGFTPRVIQEAPQMASIISLVAAGV 239 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 ++ +P M + G+V P+ P+A + RR ++ + R Sbjct: 240 GIAVVPAAM--RHMGAAGIVYRPIRGDAPRALLDMAYRRQ-PRSAAVRHAVELLRGRAH 295 >UniRef50_B5ELK2 Transcriptional regulator, LysR family n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ELK2_ACIF5 Length = 308 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 72/307 (23%), Positives = 124/307 (40%), Gaps = 15/307 (4%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 +++ +R F+ VA A+ L +SQP LS+ I LEE L A+L R ++ V LT Sbjct: 1 MSLELRHLRYFIAVAEDLHFSRAAERLGISQPPLSQQIHTLEEMLGARLLVRTNRRVALT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASIS-RSLMPAVISRFHQQH 121 DAGE+F + A IL ++ A + +R + G+++IGM S +P I RF + Sbjct: 61 DAGEAFLKEARAILVQVDRAVDYVRSVERGEKGELHIGMTRSAMLAKQVPRAIFRFRTEF 120 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP- 180 P V + + E + I+ L ++ I P L HP Sbjct: 121 PSVHLGLEELNSLEQIDALIHEKIQVGIMRVQHLPAM--LQSHMLYADPLVAVLPAKHPF 178 Query: 181 ------AIGARSIKQLLDYSWTMP--TPHGSYYKQLSELLDDQAQTPQVGVVCETFSACI 232 QL+ + + + Q ++ D P++ + S I Sbjct: 179 CPISPTLSVPLDPAQLVHEQFIIFADSAGTGIRNQFYQICHDAGFNPRIVQEVQEASTMI 238 Query: 233 SLVAKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQ 292 LVA ++ LP + L + +P+S ++ +++ R +PL L+T Sbjct: 239 GLVAAGLGITILP--VSYSYLQQDSVCYIPLSSPSARSDIHVVYRC-RDHSPLLRQLLTI 295 Query: 293 FRRECGY 299 + E Sbjct: 296 LKSEAAA 302 >UniRef50_Q67SW7 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67SW7_SYMTH Length = 305 Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 65/294 (22%), Positives = 126/294 (42%), Gaps = 4/294 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + + AF +A+ GS A+ L ++QP+++ IQ LE+ L QLF RR +GV LTDA Sbjct: 1 MDVQGLEAFWWIAKTGSFNRAAERLFLTQPSVTARIQALEKELGQQLFERRPRGVRLTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + HA +L++++ A++ + Q G +++G + S L+P ++ RF + +P V Sbjct: 61 GRALLPHAERVLQDIKRARQAVLDLQTASGGTLSVGSALTTSAYLLPDILLRFKRGYPNV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG- 183 +V + G+ + + + + E L E+ + P HP Sbjct: 121 EVLVHTGRSHQVQQLVLDDTVQVGLVHAPLP-SHAEIVSYPLSEEPILLVVPPDHPVARH 179 Query: 184 -ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++ +L S+ Y+ + + Q P + + ++ A +V L+ Sbjct: 180 SEVTLDELTQESFITTDRASGYWALVEQWWASQGFVPHITMELDSIEAAKRMVLCGLGLT 239 Query: 243 KLPEEMGCDPLHGQGLVMLPVSE-ILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 LP + +V +P++ K LI RR + + + Sbjct: 240 MLPYSTVKSEIELSQVVAVPLANSATLKRQNILIHRRGKIWSGTAKAFLRVLEE 293 >UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZY7_9GAMM Length = 318 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 55/301 (18%), Positives = 124/301 (41%), Gaps = 5/301 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 V + Q+RAFV +A+ S AS +L++SQPALS +I+ +E+ LF R ++ + L+ Sbjct: 21 MNVSLRQLRAFVTLAQSQSFAEASELLHLSQPALSVAIKNMEQETGGSLFSRSTRSLQLS 80 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 G F A +L + A +D+ + G+I + + S + + P ++ F +++P Sbjct: 81 PEGRQFLPVARRLLADWDQAFDDLGRAFNLQQGKIRVAVMPSFAMNQFPEALAPFQREYP 140 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 + + + + + S+I+ +R+G+++ I + F L ++ P P Sbjct: 141 DINISVEDVVMESVIDAVREGQVELGITF--EPDQMDGLEFTPLFTDRWIALVHPKSPLA 198 Query: 183 GAR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + S L++ + + L + TP + + +V+ Sbjct: 199 ARKKLSWTALMEEPFIAMNRGSWSRNTTEKALSEAGVTPTRLLEANQLATIGRMVSVGLG 258 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 + +P+ + + G++ + + + R+ + +LI + Sbjct: 259 TAVVPQ-LCRQQMESLGILCKTIGRPSIERQVGIFTRKRRSLSGAAQALIAHLLEHFSKV 317 Query: 301 Q 301 Sbjct: 318 S 318 >UniRef50_C0Z518 Transcriptional regulator n=3 Tax=Paenibacillaceae RepID=C0Z518_BREBN Length = 295 Score = 271 bits (694), Expect = 3e-71, Method: Composition-based stats. Identities = 67/293 (22%), Positives = 120/293 (40%), Gaps = 6/293 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ + F EVAR GS A+ L +QP ++ +Q+LE+ A LF R + + LT A Sbjct: 1 MELVYLHTFREVARYGSFTRAAEELGYAQPTVTAQMQKLEQSYGAPLFERYGRKLRLTQA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+ +A ++ ++E I + Q G I IG +++ +P + F QQ+PQV Sbjct: 61 GEALLPYARELIRLYGESKEVI---KHQTTGPIAIGTIDTLAAFFLPPYLQAFCQQYPQV 117 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA--I 182 + + ++ ++R G LDF I + D E + E++ + P H Sbjct: 118 DLVLRTAGEAEIVQQIRDGYLDFGIIF-DRPCTDPELVTHVIREEELVVVMPPAHRFTTA 176 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 A ++ L + +Y L E + T ++ A V ++ Sbjct: 177 TALTVHDLGGEPLVLTEEGCTYRGMLLEAFGEAGMTQRIACQFSNPEAIKQCVRCGLGVA 236 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 LP L L +P P + L+ + +P +L+ R Sbjct: 237 LLPVMAVQRELAEGVLTAIPFQSDKPPFSIQLVYHKKKWLSPSMVTLVDTITR 289 >UniRef50_C1F961 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F961_ACIC5 Length = 288 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 60/288 (20%), Positives = 121/288 (42%), Gaps = 7/288 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ HQ+R +A G+ A+ ++QP+LS+ + +LEE L +LF R + + +T+A Sbjct: 1 MEFHQLRYVCAIAETGNFSRAAERCQVAQPSLSQQVLKLEEDLGVKLFDRLGRSLRITEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +F HA IL ++ AA+ + + + G + +G+ +I+ LMP + F +++P+ Sbjct: 61 GRAFLPHARSILHQMEAARASVAGKSKDVRGSVAVGVIPTIAPYLMPRYTAAFARKYPEA 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++RI+E ++ LR +D + + LL + HP A Sbjct: 121 RLRIVEETTPVLVESLRNLSIDLAVLAL--PLRHKDLECIPLLTEPMFAVLPKDHPRASA 178 Query: 185 R--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + S+K L ++ M + TP++ F + +VA +S Sbjct: 179 QTLSLKDLRGETFVMLRDGHCFRDLSLAACSHARVTPRIAFESGQFRSLFGMVAAGMGVS 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLI 290 +P+ G + +S+ R + + + Sbjct: 239 LVPQMAMD---RSAGCAYVRLSDARAARTVVAATLRGRSFNHMQQAFL 283 >UniRef50_C0Z4V5 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z4V5_BREBN Length = 298 Score = 269 bits (690), Expect = 6e-71, Method: Composition-based stats. Identities = 69/291 (23%), Positives = 132/291 (45%), Gaps = 5/291 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I Q++ FVEV + + A++ L++SQP++SK I+ LEE L L R + + LTDA Sbjct: 1 MDIRQLQYFVEVVKHKNFTKAAQSLHVSQPSISKMIKALEEELEVVLLDRTERKMDLTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE Y +A+ +L+ + I + + G++ +GM ++ L+P VI+ F +Q+P + Sbjct: 61 GEMVYSYATKVLQLMEGMASSIAELRNVERGRVKLGMMPTVGSFLLPNVIALFKKQYPGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG- 183 + + E + ++ QG +D + +F LL + H G Sbjct: 121 DIEMKEYSAKLLEIQMEQGSIDVALTVL--PMDQEKFEAVPLLAEDLVAIVHREHWLAGV 178 Query: 184 -ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 S++QL D ++ + T + + + P V + + +VA +S Sbjct: 179 DEVSLEQLKDEAFILFTEEYAMHDVVRHACKLSGFEPNVAYMSSLWDFVGEMVATQLGIS 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 +P + L+ L + +S + Y LI R++ + T + I+ Sbjct: 239 LIPRSIVRR-LNNGQLHTVNISYPVIDWQYALIYRKEGYLSHATKAFISFV 288 >UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KYF2_THERP Length = 299 Score = 269 bits (690), Expect = 6e-71, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 120/295 (40%), Gaps = 4/295 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 V + Q++ F VAR S A+ L +SQPA+S I+ LE+ L LF R +GV LT Sbjct: 1 MDVSLRQLQVFRSVARHRSFSRAAEDLVISQPAVSAQIKSLEQVLGVPLFQRTGRGVELT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 +AG +A +L L A + + + GQ+ + + ++P + FH+ +P Sbjct: 61 EAGRQLLPYAERLLNLLDEALAAVHELRCAQRGQVRVAASTTAGIYVVPKALGAFHRAYP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 V++ + ++ L G+ D I + P + E+ L + + P H Sbjct: 121 GVELSLDVLNRFAVHQRLLAGDADVAIMGLIEDPQ--DLEIEQFLPNELVVIASPRHHLA 178 Query: 183 GA--RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + ++ + + + + + +P+V + + A VA Sbjct: 179 RRHQIPLDEIAREPFLVREIGSGTRADMERIFAEAGLSPRVAMELRSNGAIKQAVAADLG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 ++ +P + L L++L V + + L++R + + +L + Sbjct: 239 VAVMPRDAIGLELETGRLIVLDVQGFPVRRWWSLVRRAGRQPSAAADALWNFLLQ 293 >UniRef50_A9WIA6 LysR substrate-binding n=4 Tax=Chloroflexaceae RepID=A9WIA6_CHLAA Length = 307 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 65/287 (22%), Positives = 121/287 (42%), Gaps = 3/287 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + +H +R +V V QGS A+ +L MSQ A+S+++QELE L L RR++GV T A Sbjct: 17 LNLHLLRIYVAVLEQGSFTKAAEVLTMSQSAVSRAVQELERQLGTTLLERRARGVAPTMA 76 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +HA I R A E + + +G G++ IG ++I L+P ++ +H+++P + Sbjct: 77 GTILGEHARRIFTHERLAIEALNELRGLQRGRLAIGASSTIGIYLLPPLLGNYHRRYPGI 136 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + G +I L ++D + + + + P HP Sbjct: 137 ELFLDIGNTQQIIERLLSYQIDVAYVEGPV-AANEDLQVVPWRSDEMVVIASPDHPLTRR 195 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++ L D + M P K + + L T + + + A V+ LS Sbjct: 196 VTLDCSDLQDAPFIMREPGSGTRKVMEQALAAHNVTVRPVMELGSTEAVKQAVSAGLGLS 255 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASL 289 + L L +L + + + ++ D Q+ + Sbjct: 256 MVSRFTIQSELIAGKLRVLNIPGLNIQRQLSRVRLHDRPQSLALEAW 302 >UniRef50_A6SW66 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SW66_JANMA Length = 289 Score = 268 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 65/295 (22%), Positives = 132/295 (44%), Gaps = 8/295 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R F+ A+ S AS L+++QP LS I+++E+ L QLF R + V LT A Sbjct: 1 MELRHLRYFLAAAQSQSFTRASESLHITQPTLSHQIKQIEDELGIQLFDRVGRVVKLTTA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE F +A L E+ A + + + + G++ G+ +S +P +++ F++ +P + Sbjct: 61 GELFQVYAKRALLEVDAGLDALNELENLKHGRVTFGVLSSFGTFHLPPILADFNKVYPGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 K+ ++ + + L G+L F + Y + E L A+ HP +G+ Sbjct: 121 KITVLRLRSGEIEERLLDGDLHFGVA--YAPSSTEQINVEPLFTVPLALVVGDHHPLVGS 178 Query: 185 --RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++ +L ++ M + + K + +L TP++ + ++ V S + Sbjct: 179 AGITLNELNEHELVMLSDEYNSRKMMDAILLANGITPRIVMEMNAIEPILATVRHSSLAT 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 L + GL +P++ L RR+S + +L+ R+ Sbjct: 239 ILSANLVD---EMPGLHQVPLT-PTVTHTVGLFTRRNSHLSAAARALVDTIRQRF 289 >UniRef50_B9TDR3 HTH-type transcriptional regulator xapR, putative n=1 Tax=Ricinus communis RepID=B9TDR3_RICCO Length = 301 Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 58/298 (19%), Positives = 116/298 (38%), Gaps = 10/298 (3%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + + Q++ F+ VA + S A+ L++SQP LS+ I +LE L +LF R ++ LT Sbjct: 1 MSIDLKQLKYFLAVAEEKSFSRAAERLHISQPPLSQQIMKLESELGVKLFARTTRTFELT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 AG++ A+ +L +R + IRQ G++ +G+ S +P+++ F + P Sbjct: 61 VAGKALMSEAADLLARMRMTIDTIRQIDRGEVGRLRVGIVGSAMWGPIPSLLEEFQTKFP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYD----HEFTFEKLLEKQFAIFCRPG 178 +V + E LR ++D + D E + + Sbjct: 121 RVTWTLHEMGPTLQYEALRAKQVDVGFWREPRIDDDVLKNDNLRQELCFREDVCVAINEH 180 Query: 179 HPAIGARSIK--QLLDYSWTMPTPH-GSYYKQLSELLDDQAQTPQVGVVCETFSACISLV 235 HP +I+ + + S+ + L + P + +++V Sbjct: 181 HPLAKQEAIELMDIAEEPMLTLALDKSSFPRYLMQCCVQAGFQPTIAQEATEPQTLLAMV 240 Query: 236 AKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 ++ +PE + G+V +P+ P A Y+ P+ + + Sbjct: 241 GAGLGVALMPETTSR--IGWPGVVFVPIRSNPPSANLYITYTTQDD-APVVRAFLNIL 295 >UniRef50_A0JW92 Transcriptional regulator, LysR family n=3 Tax=Micrococcaceae RepID=A0JW92_ARTS2 Length = 306 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 117/292 (40%), Gaps = 9/292 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ ++ F+ VA + A+ L+M+QP LS+ I++LEE L L R ++ V LT A Sbjct: 1 METRHLKYFIAVAEERHFGRAAARLHMAQPPLSQQIRQLEEQLGTPLMVRTTRKVELTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ ++L+EL+ + D++Q G + +G + + LMP ++ + P + Sbjct: 61 GQVLLDRGRVLLQELQVLESDVQQVGEGATGVLRVGFTGTATYRLMPIIVQAARRTLPGL 120 Query: 125 KVRIM-EGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI- 182 ++ + E M L +G LD + + + L + Q P Sbjct: 121 RITVQGEMLTPQMEAALEEGRLDAAV--LRPPVHSGAIALKLLEQDQLVAALPADSPLAE 178 Query: 183 -GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 G + L + + + + + P+V + S +SLVA + Sbjct: 179 KGTLELAALSEEGFIGYPGYSAVSSIFVDACRKAGFQPRVVQEAKETSTLLSLVASGMGI 238 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 + +P M QG+ P+ P + D TPL + + F Sbjct: 239 ALVP--MTSRMFSYQGVAFRPLRNPPPM-DLAVAWNSDKE-TPLLRAFLDLF 286 >UniRef50_A0R3Z8 Transcriptional regulator, LysR family protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0R3Z8_MYCS2 Length = 289 Score = 267 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 66/292 (22%), Positives = 120/292 (41%), Gaps = 9/292 (3%) Query: 7 IHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGE 66 + +R FV +A + A++ L+++QPALS+ IQ +E L AQLF R + V+LT+AG+ Sbjct: 1 MRHLRCFVVLAEELHFGRAAQRLHVAQPALSQLIQRVERELGAQLFLRTRRTVSLTEAGQ 60 Query: 67 SFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKV 126 + A IL + + +R G + IG S + ++P +++ + HP V + Sbjct: 61 TLLPEARRILRDADRVTQAVRAVHRGETGSVTIGFVGSAADDVLPRLVAAHRRHHPGVSI 120 Query: 127 RIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARS 186 R+ EG + LR + + D + L + + H GA S Sbjct: 121 RLEEGTTAQQLEWLRDQRITVGLGRT--PIDDPAVSTVVLARESLVLAVPDSHALSGAES 178 Query: 187 --IKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + L + + M Y + TP V + LV+ ++ Sbjct: 179 AELAGLAEEPFIMFPRHLGPGLYDIIHSACAAAGFTPSVVYETVRMQTIVGLVSGGLGVA 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 +PE + L +G+ + +++ P ++ R D +P L R Sbjct: 239 LVPESV--RNLGRKGVRYVHLADAPPAIELSMMWRNDCE-SPHLQPLRKTAR 287 >UniRef50_UPI0001694914 Transcriptional Regulator, LysR family protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001694914 Length = 299 Score = 267 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 122/293 (41%), Gaps = 10/293 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R FV VA + + A+ LN++QP LS+ I++LE+ L L FR + V LT+A Sbjct: 1 MELRHLRYFVTVAEELNFGRAAARLNITQPPLSQQIRQLEQELGFPLLFRTKQRVELTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F + A + L + + R+ AG+++I S + ++P ++ + + P V Sbjct: 61 GKVFLEEARITLAHIDKTLDSARRAHLGAAGRLDIAFVGSATYRIVP-LLQSYRMRFPSV 119 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG- 183 + + + + + + L + ++ I + ++F + HP Sbjct: 120 SLVLHQMKTANQLQALHESQIHLGIIR--SPVQSPLLASTVIYRERFLVALPHTHPLTRE 177 Query: 184 -ARSIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 I+ L + +P+ Y++ + L P++ + ++ V+ Sbjct: 178 NQLRIQDLEHQDFILPSRSNGSMYHEAVIRLCFQSGFYPKIALEAPEILTIVAFVSAGMG 237 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 ++ +P G+V + + ++ R++ + + + + Sbjct: 238 IALVPASF--QNQQNIGVVYRELENVGTMLDMVMVWRKNEK-SQVLKQFLQHI 287 >UniRef50_B5XVV4 Transcriptional regulator cynR n=5 Tax=Enterobacteriaceae RepID=B5XVV4_KLEP3 Length = 313 Score = 267 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 64/299 (21%), Positives = 126/299 (42%), Gaps = 7/299 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + + F+ VA A+ L++SQPALS+ I++LE L QLF R + LTDA Sbjct: 1 MLLRHLSYFIAVAEHRGFTRAAAALHVSQPALSQQIRQLEAMLEVQLFDRSGRYTRLTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE + ++A +L +L + + + G++ I M + + ++ ++ +++++P V Sbjct: 61 GEIWLEYARRVLRDLEEGRRALHDAEDLQRGKLRIAMTPTFTTYVLGPLVEAYYRRYPGV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 K+ I E M L + ELD I + + LL + A+ HP Sbjct: 121 KLLIQEMNQERMETMLLEDELDVGIAF--DESLSRDIVVQPLLTETLALVVSRAHPLAHE 178 Query: 185 --RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++ L + + + +Q+ P V + + A ++++ + + Sbjct: 179 SHLQLQALDAQPLILLSSEFATREQIDRYCRRHRLEPDVRMEANSIGAVLTVIRGTLLAT 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQ 301 LP + LV + + L + L+QR+ + Q+ I R L+ Sbjct: 239 LLPAAIAGQY---DDLVAIELKPALLQRTACLLQRQGAWQSAAAREFIALAREIAATLE 294 >UniRef50_C1ZI46 Transcriptional regulator, COG0583 n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZI46_PLALI Length = 292 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 66/294 (22%), Positives = 125/294 (42%), Gaps = 7/294 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++HQ+R F++ A S A+ +SQP+LS+ I +LE+ L LF R +GV LT++ Sbjct: 1 MELHQLRYFLKAAELKSFTLAAAECFISQPSLSQQIIKLEQELGQPLFERSGRGVELTES 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ A I+ + A+ +I GQ+ IG +I+ L+P ++SRF + P+V Sbjct: 61 GKLLQSRAGQIVSLVDQARREITD--DGETGQLTIGAIPTIAPYLLPQIVSRFREVVPRV 118 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG- 183 ++I E + +++ GE D I E L +++ + PGH Sbjct: 119 TLKIHEDVTEQCLKKVQAGEWDLAIAAL--PVRIEHLEVEPLFDEELWLAVPPGHRLSHL 176 Query: 184 -ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++++ + + + +++ + P + + LV++ +S Sbjct: 177 TEVPVEEIDRETLLLLGEAHCLTEHVAQYCRRKDMAPLETGRLAQLTTIMELVSRGQGVS 236 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 +P M P+ P+ L+ QT L + RRE Sbjct: 237 FIP-NMCKAFDREGRCAYRPLQGDRPQRTIALVWNSYRFQTLLLKRALDVIRRE 289 >UniRef50_A9B3V4 Transcriptional regulator, LysR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B3V4_HERA2 Length = 298 Score = 267 bits (684), Expect = 4e-70, Method: Composition-based stats. Identities = 64/293 (21%), Positives = 133/293 (45%), Gaps = 9/293 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+R F VAR G++ A+ +++QP+LSK+++ LE+ L LF R +GV L+DA Sbjct: 1 MELSQLRYFEAVARLGNVTKAAHEQHIAQPSLSKALRALEQELGVHLFDRVGRGVELSDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ +A +L EL+AA+ ++ R G +++G+ ++ L+P ++ F++++ + Sbjct: 61 GKLLLPYARRVLAELQAARHALQSRADLTVGHVSLGVTPTVGTRLIPQALAAFNRRYRGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + E ++ L G +D I + H L+ + + H Sbjct: 121 QLELHEAGASELVELLNAGVVDLAIVS----ALVHGVESTTLMSEPLVVAVGLQHRFAQR 176 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 +SI +L D + + +L + P++ + +SLVA ++ Sbjct: 177 QSIAANELRDEGFILFPQGYELRNYTLQLCEQAGFAPRIVLDGGEMDTVVSLVAAGLGVA 236 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 +P+ + GL L + + LI+ + +P A+L Sbjct: 237 VVPQLAIDQRM---GLHALMIDAGGLQRTLRLIRHSQRQPSPAAAALHRVLHE 286 >UniRef50_Q4ZQQ6 Regulatory protein, LysR:LysR, substrate-binding n=10 Tax=Pseudomonas RepID=Q4ZQQ6_PSEU2 Length = 304 Score = 267 bits (684), Expect = 4e-70, Method: Composition-based stats. Identities = 71/288 (24%), Positives = 123/288 (42%), Gaps = 6/288 (2%) Query: 7 IHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGE 66 + IR + VA G+ A+ L++SQPALS+ I++LE L QLF R + V TDAG Sbjct: 15 LRHIRYLLAVADHGNFTRAAEALHVSQPALSQQIRQLESSLGVQLFDRTRRSVVPTDAGR 74 Query: 67 SFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKV 126 + HA L EL A + + GQ+ +G+ + S L+ +I RF +P V + Sbjct: 75 VYLDHARRCLLELDAGKRALNDVSDLSRGQLRLGVTPTFSEYLIAPLIDRFSALYPGVAI 134 Query: 127 RIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCR-PGHPAIGAR 185 + E L + L LD I G + E + L ++Q + P A Sbjct: 135 ILTELPLEQITEALISDALDLAIGF--AGSHAVEIDSQPLFDEQLCLVMAKPASEKQAAL 192 Query: 186 SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSKLP 245 +++ L + + P + + L Q P +G+ + + + +VA+ + LP Sbjct: 193 TLEDLQALRFALLAPGFATRQLLDAWCQMQNFKPIIGLEANSIAILLKVVAQGRMATILP 252 Query: 246 EEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 + + GL + LP L++R++ Q+ + Sbjct: 253 DAIVR---KQPGLCEVQTIPALPGRTVALLRRKNGYQSAAAKAFAKLV 297 >UniRef50_C8WSN1 Transcriptional regulator, LysR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSN1_ALIAD Length = 290 Score = 267 bits (684), Expect = 4e-70, Method: Composition-based stats. Identities = 76/296 (25%), Positives = 130/296 (43%), Gaps = 9/296 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+ F+ VA S R A+ + +SQPALS++IQ+LE L A LF R ++GV LT Sbjct: 1 MELVQLEYFLAVAEYQSFRRAADAIRVSQPALSRAIQKLEGDLGAPLFVRTAQGVRLTPC 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+F HA L E+ A + + GQ G +++G+ S+ +P VI F + HP V Sbjct: 61 GEAFLPHARQALAEVAAGARKVAELAGQARGVLHVGLIYSLGTRFLPDVIRTFTRTHPGV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 VR+ E ++ +L GE+D T + T ++L+++ HP Sbjct: 121 TVRLSEAPTQKLLQQLDAGEIDIAFCT---PQHAPHLTLVEILQEELVAIVPLDHPLAAK 177 Query: 185 RS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + L + + + TP+V + LVA ++ Sbjct: 178 DQCHLSDLAGEPFVAYARESGIRHVIERYCAEAGFTPRVAMEGVEDLTVAGLVAAGVGVA 237 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 +P D L + +L + E K + Y+ + +P+ + I +R C Sbjct: 238 VVPLHAQLDQLP---VHVLRLCEPC-KRSVYMAWHTHTTLSPVARAFIAFVKRMCA 289 >UniRef50_Q1YDL8 Transcriptional regulator, LysR family n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YDL8_MOBAS Length = 302 Score = 267 bits (683), Expect = 5e-70, Method: Composition-based stats. Identities = 72/297 (24%), Positives = 133/297 (44%), Gaps = 9/297 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 V+ +R+FV VA + A+R L+++QPAL++ IQ+LEE L A L R + VTLT A Sbjct: 2 VETRLLRSFVCVAEELHFGRAARRLHIAQPALTRQIQQLEERLQATLLNRNQRIVTLTPA 61 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G F + + IL +L A +++R+ + G++++G S + + P V+ RF P+V Sbjct: 62 GRMFLERSYRILADLEQAAKEVRRVEAGQEGRLSVGFIHSSTYGVTPLVLRRFRLAFPRV 121 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + + E + + LR G++D I D L E++F + H Sbjct: 122 DLELFEMTIQEQLAALRDGQIDVGI--LRPPISDPSLRARPLREERFVVALPHDHRLAAT 179 Query: 185 RS--IKQLLDYSWTMPTPHGS--YYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 ++ L + + + T S +Y ++ + + P+V I LV+ Sbjct: 180 DRLHLRDLSEDGFILFTQRKSPLFYARIIGMCEKAGFVPRVEQYATQIHTMIGLVSAGMG 239 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 ++ +PE L+ G+ + +++ P L R +P+ A+ Sbjct: 240 VAIVPE--VARSLNIPGVAYVEIADTPPTVQVCLGWRASDT-SPILAAFCDHAETSA 293 >UniRef50_C1PEC2 Transcriptional regulator, LysR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PEC2_BACCO Length = 304 Score = 266 bits (682), Expect = 5e-70, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 127/293 (43%), Gaps = 4/293 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 ++++ Q+ F+EVA++ + A+ L+++Q A+S+ I LE L LF+R + V LT Sbjct: 2 IRMELRQLIYFIEVAKREHVTHAADELHVAQSAISRQISLLEAELGVSLFWREGRNVRLT 61 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 G+ F +HA ++ E+ A++ + + G + +G +S +++++F ++HP Sbjct: 62 PIGKVFLEHAEKVVLEIDKAKQRMHEFLDPDNGTVRLGFSTGLSVQTFSSLLAQFREKHP 121 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 ++ + ++G +I + GEL+ + + + E L ++ + R HP Sbjct: 122 GLEYQFVQGTPSYLIRLIENGELELALAS-PVPDDHPAVSGEILYMEKLMLLFRRDHPLS 180 Query: 183 GAR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 G + + QL + + S + L P + E LVA Sbjct: 181 GQKMIRLAQLKNERFITFREGFSIREILFAACRKSGFEPAIAFEGEDMETIKGLVASGTG 240 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 ++ LPE L + +V +S++ ++ + +L T Sbjct: 241 VAILPEPALLFNL-SEEIVKAEISDMELMRPVGVMIPKKREMAASEKALYTFL 292 >UniRef50_B1Z4Z1 Transcriptional regulator, LysR family n=5 Tax=Proteobacteria RepID=B1Z4Z1_BURA4 Length = 313 Score = 266 bits (682), Expect = 5e-70, Method: Composition-based stats. Identities = 73/298 (24%), Positives = 131/298 (43%), Gaps = 5/298 (1%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M + ++AF V GS R A+ +++SQPALS+ I +LEE L +LF R ++ VT Sbjct: 1 MGINFDLTDLQAFRAVVELGSFRKAADAISISQPALSRRIDKLEEALGVRLFERTTRSVT 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT G F A +L++L A IR G + I S++ +P VI+ +H++ Sbjct: 61 LTTVGRVFAPSAEQLLDDLDVALLGIRDVSSSRLGHVTIACVPSVAYYFLPNVIASYHRR 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P+++V++++ +++ + GE DF ++ G + E F+ LL+++F CR HP Sbjct: 121 FPRIRVKLLDAGANEVLSAVISGEADFGVSFM--GSQEPEIDFKLLLQERFVAACRRDHP 178 Query: 181 AIG--ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 + +L +Y + L + L A + + L+ Sbjct: 179 LARKKRVTWNELYEYEYVSVDKTSGNRLLLDQALTTVAPRAPSVCETRHVTTLLGLIEAG 238 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 ++ +P M L +P+ E + K +++RR TP Sbjct: 239 LGVAAVP-SMAMPGHDHPLLTSVPLVEPVVKRRVGIVKRRGRPLTPAAEEFHRAIVDA 295 >UniRef50_A9F7Y4 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F7Y4_SORC5 Length = 327 Score = 266 bits (682), Expect = 5e-70, Method: Composition-based stats. Identities = 63/296 (21%), Positives = 120/296 (40%), Gaps = 11/296 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + +R F VA + A++ L ++QP LS+ IQ+LE L LF R + V LT A Sbjct: 1 MDLRHLRYFTAVAEERHFGRAAQRLGIAQPPLSRQIQDLESELGFSLFDRSRRRVELTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G H + + L A + R+ G++ +G +S++ S + ++ F + P V Sbjct: 61 GAVLLAHVRRVFDALELAVHEARRASVGETGRLVVGYLSSLAYSGITELVRTFRGELPAV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + E I L+ G +D +D E + + + HP Sbjct: 121 ELALREMPPQEQIEALKDGRIDVGFVR--APLHDARLASECVRREPLLVALPADHPLAAR 178 Query: 185 RS--IKQLLDYSWTMPT--PHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + ++ L + + +++ + L +P++ +SLVA Sbjct: 179 KRIPLELLSREPFVVFPRQRGSAFFDLVMGLCRAAGFSPRIAQEALHLD-ILSLVAAGFG 237 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 +S LPE + + +GL + P+ P + R D +P ++ RR Sbjct: 238 VSILPESI--KNVGRKGLALRPIVG-APSTDLLVAWRADDA-SPTLRQFLSFVRRV 289 >UniRef50_A4ISN4 Transcriptional regulator LysR family n=6 Tax=Geobacillus RepID=A4ISN4_GEOTN Length = 305 Score = 266 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 126/297 (42%), Gaps = 7/297 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + Q++ FV +A +G I A++ L+++QP LS+ +++LEE L LF R++K + LT Sbjct: 2 IDVKQLKYFVTIAEEGQITKAAQKLHIAQPPLSQQLKQLEEKLGVPLFDRKAKKMELTAP 61 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ FY+ A +L +L A ++++ + G + +G S + I +FH+Q P V Sbjct: 62 GKLFYEKAKQLLHQLDDAIAEVKEIETGATGTLAVGCVKSCFSY-LAQTIRQFHEQFPNV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG- 183 + EG S+ L++ +D I + L ++ Sbjct: 121 TFHLREGDTFSICQLLQERHIDIGIVRL--PIDSSHYDIIPLPSDRYVAVLPEHWALSRS 178 Query: 184 ARSIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 + S++ ++ + Y+++ E P V C + +SLVA+ Sbjct: 179 SLSMRDFAEWPLLLLHRVHGAGQYERVVEECRRHGFEPNVLCECPDATILLSLVAQGMGA 238 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 + +P+ G+ +LP+ + KA +I R + ++ Sbjct: 239 TIVPQSTV-SLFRLPGIRVLPIVDSSMKAEAAVIIDRQRYVPKSVHHFLNLLQQTVA 294 >UniRef50_C3LMU4 Transcriptional regulator, LysR family n=65 Tax=Gammaproteobacteria RepID=C3LMU4_VIBCM Length = 296 Score = 266 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 64/293 (21%), Positives = 124/293 (42%), Gaps = 8/293 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+R FV VA S A++ L+++QPALS SI++ E+ L LF R + V LT Sbjct: 8 MEVRQLRHFVTVAEWESFTLAAQQLHIAQPALSISIKKFEQQLGVTLFKRDERKVALTHE 67 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE +HA IL+++ AQ + + +G + G++ +G + + P +I F P + Sbjct: 68 GEVLLEHAKRILQQVNDAQLAVDELKGVVKGEVRLGAPSMMGSYFFPQIIMAFKSHFPNL 127 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 K+ ++E S+ L GELD + + P + + LL Q H Sbjct: 128 KMTVIEAGTQSIRRMLLSGELDIGVILNHDLPD--DLAADPLLSSQMVAVVGKNHELAER 185 Query: 185 R--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 R + + ++ M P + + ++ + T +S+V ++ Sbjct: 186 RHLTFAEFFEHELVMFKPGYFHRDFIDKVCREHKFTADFSFETNLLPMILSIVKHEYAIT 245 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 L E + + + +P + L R++ + + I ++ Sbjct: 246 ALLELVTSNE---PEVKAIPFEPPVW-LDLALAWRKEGYLSNADRTFIEFVKK 294 >UniRef50_Q12AP3 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=Q12AP3_POLSJ Length = 303 Score = 265 bits (680), Expect = 9e-70, Method: Composition-based stats. Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 7/295 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R FV +A + A+ ++++Q LS I++LEE + LF R K V +T+ Sbjct: 1 MELRHLRYFVALAECLNFTRAAERVHITQSTLSHQIRQLEEEIGELLFERVGKRVLITER 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE F +A+ L+E+ +++ L G++ IG + ++ +P I+ +HP V Sbjct: 61 GELFLSYAAKALKEVDQGVAALKESARGLTGKLRIGSTHTFNQGFIPECIATLLVRHPTV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 KV E + L G LD I+ Y+ + FE L +Q + P HP G Sbjct: 121 KVAASEFTADDIGERLASGALDLGIS--YRPRTVGDLWFEPLYNEQMVLVVSPQHPLAGR 178 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + I+ +L + + L E P V V T + ++LV ++ + Sbjct: 179 KRIRLVELHRQPLVLLPEAFATRAMLDECFRACDAEPLVVVEMNTLAPMLALVERTQIGA 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 + E D L +P+ P ++ +RD +T + + R Sbjct: 239 IVSENAVRD---RSTLRAVPLESPTPMRTPGILWKRDVDKTAPMRAFASIVRAIA 290 >UniRef50_A6VSP2 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VSP2_MARMS Length = 296 Score = 265 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 125/297 (42%), Gaps = 7/297 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ ++ F+ VA + A+ L+++QP LS+ I+ +E+ + A LF R S+ V+LT A Sbjct: 1 MRFRKLNYFITVAEELHFGRAAARLHIAQPPLSQQIKAIEDEIGAVLFERSSQKVSLTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+ A +L++ QE +R +G +++G + I++F Q + V Sbjct: 61 GEALLPQARALLQDWEKIQEQVRSIANGTSGNLSLGFVWAAGTPHFSKGIAQFKQDNHGV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + + E ++ LR ++D + + + ++ + HP Sbjct: 121 TLNLEEMTTTHALDALRTKKIDLAMIFLNPLMDITDLEHQDYETQKHLLALPENHPLAQK 180 Query: 185 RS--IKQLLDYSWT--MPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 S + L + + H S Y Q+ L P + + +LVA Sbjct: 181 ESVPLSDLHQLPFISFVRQAHPSLYDQIMHHLHAAGVEPNIVQIARLTQTTRTLVAAGVG 240 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 ++ +PE +GL P+ +LP+ + + R++ TPL LI + + Sbjct: 241 VALVPES--TQFDRREGLTYRPIDGVLPELDIHFVWRKNG-LTPLMERLIAHLQEQV 294 >UniRef50_B8KMT5 Transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KMT5_9GAMM Length = 300 Score = 265 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 70/295 (23%), Positives = 130/295 (44%), Gaps = 5/295 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 V I+Q+ AF VAR GS A+ L++SQPALS +I+ LEE L +LF R ++ VTLT Sbjct: 1 MAVPINQVMAFSAVARTGSFAEAALRLHLSQPALSIAIKNLEEALGGKLFARTTRSVTLT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 G++FY A +L + + +D+R G+++I + + +L+P +++ FH+Q+P Sbjct: 61 PEGKAFYPVARRLLSDWEQSLQDVRNHFSLRRGKLDIAAMPTYTINLLPKILASFHRQYP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 + V + + S++ +R+ + + + TF+ L +F HP + Sbjct: 121 NINVTVHDVIAESVVEMVREHRCELGVTF--DPDDSPDLTFQPLFIDRFIAIFPKQHPLL 178 Query: 183 GA--RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 G + LLDY ++ + L + + +V + Sbjct: 179 GKGSLRWRDLLDYPHISLQKPAGTRARIDQTLAKKGLRITPAFESHQLVSIGRMVREGLG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 LS +P + GL ++ + +I RR + ++ + R Sbjct: 239 LSVVP-STSRAQMKEMGLECRAIAFPVITHQLGVITRRQQTLSVAAQAMASLIRE 292 >UniRef50_C1DGS2 Transcriptinal regulator, LysR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DGS2_AZOVD Length = 301 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 63/293 (21%), Positives = 112/293 (38%), Gaps = 10/293 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+R F+ +A A+ L+++QP LS+ I LE L LF R S+ V LT A Sbjct: 2 IELRQLRYFMALAEHLHFGKAAESLHITQPPLSRQISALEADLGVVLFSRHSRSVELTAA 61 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G F QHA L EL A R G++ + + L+P ++ + +P V Sbjct: 62 GRDFQQHAKTALAELDLAIRSTRASARGERGELRVSFTMVAAWILLPELLKAYSDAYPDV 121 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + + E + L +GE D + G + L + HP A Sbjct: 122 SLALNEVLPRDLGPALERGEADIALTFPSSG--SKSLCYRALRREPLCAVLPASHPLAAA 179 Query: 185 R--SIKQLLDYSWTMPTPHG--SYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 SI L D + + ++ + P++ + ++LVA+ Sbjct: 180 TEFSIAALADEPFITFPRQTAPALHEAVMSCCRRAGFEPKIRLETHLQQTIVNLVAEGLG 239 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 +S +P M + G+ + + P Y +I + P + + Sbjct: 240 VSVVPGSM--RKMRMPGVAFKAI-DRSPPVEYGVIWNP-RNENPCLNTFLRCV 288 >UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=Rhodobacter sphaeroides KD131 RepID=B9KVK0_RHOSK Length = 321 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 69/294 (23%), Positives = 123/294 (41%), Gaps = 5/294 (1%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 + + +RAFV A S R A+ +++SQPAL++ IQ+LE L L R ++ V+L Sbjct: 13 RMNIDLEDLRAFVATAEMQSFRAAADSIHLSQPALTRRIQKLEATLGVSLLERTTRRVSL 72 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T G F A IL++L + +R+ + +G ++I + + +P VIS F ++ Sbjct: 73 TAVGRDFLPRARRILDDLETSLLSVREIAERRSGLVSIACIPTAAYYFLPDVISAFTEEF 132 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P ++ RI + ++ + E DF I G D + TF+ L+E+ F + CR HP Sbjct: 133 PAIRFRIFDAGANEVLQSILNREADFGITLL--GADDPDVTFDPLIEEPFLLACRRDHPL 190 Query: 182 IGA--RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 + L + + + L P+ + S + LV Sbjct: 191 ARQESVTWADLAAHRFVTVGRTSGNRLIMDLALARANVRPRSFFEVQHLSTSLGLVEAGL 250 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 ++ LP +V LP+ E +++ +R+ P Sbjct: 251 GVAALPRMALPAG-PHPSIVTLPLIEPRVTRTVGVVRVPGARRAPAAEQFYQML 303 >UniRef50_P25544 RuBisCO operon transcriptional regulator n=13 Tax=Proteobacteria RepID=RBCR_CHRVI Length = 302 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 71/301 (23%), Positives = 129/301 (42%), Gaps = 5/301 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 V + Q+R F VAR S A+ L++SQPA+S +++LE+ + LF R K V LT Sbjct: 1 MHVSLRQLRVFEAVARHNSYTRAAEELHLSQPAVSMQVRQLEDEIGLSLFERLGKQVVLT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 +AG + ++ I + LR +E + +G G + I + +++ P +++ F Q+H Sbjct: 61 EAGREVFHYSRAIGQSLREMEEVLESLKGVSRGSLRIAVASTV-NYFAPRLMAIFQQRHS 119 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 + +R+ S++ L +D + P + E E ++ + P HP Sbjct: 120 GIGLRLDVTNRESLVQMLDSNSVDLVLMGV--PPRNVEVEAEAFMDNPLVVIAPPDHPLA 177 Query: 183 GAR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 G R S+ +L + ++ M + + ++ QT + G+ A V Sbjct: 178 GERAISLARLAEETFVMREEGSGTRQAMERFFSERGQTIRHGMQMTRNEAVKQAVRSGLG 237 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 LS + L + LV L V + +YL+ RR R +P + E + Sbjct: 238 LSVVSLHTIELELETRRLVTLDVEGFPDRRQWYLVYRRGKRLSPAAGAFREFVLSEAARM 297 Query: 301 Q 301 Sbjct: 298 H 298 >UniRef50_UPI0001744D79 transcriptional regulator, LysR family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744D79 Length = 300 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 127/293 (43%), Gaps = 6/293 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ + F EV RQ S A ++L ++QP +SK++Q+LE LF R+ K LT A Sbjct: 1 MESRALAVFAEVVRQKSFSAAGKILGLTQPTISKAVQQLEHDCGCLLFDRQGKKFRLTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE YQ A +IL+E ++++ G G++ +G+ + S L ++ F +QHP + Sbjct: 61 GEVVYQRAQVILKEHERLRDELAGIHGLERGRLRLGLPSLGSSLLFAPHVASFRRQHPGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + E + + +R GE++ ++ EF ++ + ++ GHP Sbjct: 121 EIELHEQGSLHLQERVRAGEIEVGVSLGPVP---EEFDWQPVSDEPLVALLPAGHPLERE 177 Query: 185 RS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 S + L D + + P S + + + +P I+LVA ++ Sbjct: 178 TSLELADLKDTPFVLFEPGFSLNAVILDACRQRGFSPVEAARSGHVDFIIALVAAGLGVA 237 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 LP + ++P+ + + LI RR +P + + Sbjct: 238 LLPRLIVNSREQRV-CTVVPLRDEDLRWRLGLIWRRGGDLSPAARRWLEVVQE 289 >UniRef50_Q11BY5 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11BY5_MESSB Length = 307 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 65/282 (23%), Positives = 118/282 (41%), Gaps = 11/282 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + Q++ F +A + R A+ LN++Q LS +IQ LE+ L A+LF R + V LT+ Sbjct: 1 MNLKQLQYFSVLAEELHFRRAAEKLNITQSPLSIAIQNLEQELGAKLFHRNQRSVQLTEV 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLM---PAVISRFHQQH 121 G Y HA ++ L ++DIR AGQ+ I + + SL+ P +IS F ++ Sbjct: 61 GRRLYDHAQGLISRLEHCEQDIRAIVNGKAGQLRIAF--TAASSLLSPFPKLISAFQKKF 118 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P++ V++ V I+ L +G +D + + E + +L + + GHP Sbjct: 119 PEIDVQLQSMTTVQQISALSEGTIDIGLLRRPRQSIPAEISTRRLATDRLVVALPSGHPL 178 Query: 182 IGARSIK--QLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAK 237 + +L + Y Q +L P + E + + LVA Sbjct: 179 TSKSVVAIPELAKEKFIFFPRKMGIGIYDQFIKLCGKWGFAPDIVQEAEEATTIVGLVAA 238 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRD 279 ++ +P + + L +++ L R Sbjct: 239 GLGVAVVPGGL--RYIQIPNLEFRHIADEDAITELLLAFRTG 278 >UniRef50_A8FAC2 Possible LysR family transcriptional regulator n=21 Tax=Bacillus RepID=A8FAC2_BACP2 Length = 329 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 63/299 (21%), Positives = 116/299 (38%), Gaps = 11/299 (3%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 ++ + QIR F+ VA + + A+ L M+QP LS+ I++LEE L LF R + V L Sbjct: 30 GLKMDLRQIRYFIMVAEELNFSRAAERLKMAQPPLSQEIRKLEEQLGVTLFHRTRRQVEL 89 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 +D+G F + A L ++ + + G + IG S ++ +I RF + Sbjct: 90 SDSGRVFLEEARRTLLQVDRTIKATQLADDGKIGHLTIGFVDS--TDMVIDIIKRFRESF 147 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P + + + E + L + E+ I + T E E+ ++ HP Sbjct: 148 PNIHLVLCEMATEQQLKALHKKEIQ--IGFIRSNQNNKILTSEICCEESLSLVLPENHPL 205 Query: 182 IG--ARSIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAK 237 I L + + M ++Y + + + V ++LVA Sbjct: 206 ASFPKVPIHLLANEPFIMFPRHLGAAFYDLIISYFWENNISLNVVQEAVQMHTIVNLVAA 265 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 +S + + G+V + E P+ Y+ R D + + +T R Sbjct: 266 GMGISV--VPSSVESVKRSGVVYRKIQETTPRVNLYVSWRHDET-STVAQHFLTVVREA 321 >UniRef50_Q46WQ0 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46WQ0_RALEJ Length = 304 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 64/300 (21%), Positives = 118/300 (39%), Gaps = 5/300 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 V + Q+RAF+ VA++ A+ L++SQ ++S I ELE+ L +LF R ++ + +T Sbjct: 7 MNVSLRQLRAFIAVAQERHFTRAAEKLDLSQSSVSALIHELEDNLGLKLFDRHTRQLHIT 66 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 AGE + ++ +A E + + G+++I + + ++P I F HP Sbjct: 67 QAGEELLPLVKKAVADIDSAIETSSELRTLGRGRVSIAASSIQAALMLPRFIREFSLGHP 126 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 VKV I + + + GE+DF I T +G + T +L F I P HP + Sbjct: 127 GVKVDIHDVSEHEVPKMVSSGEVDFGIGTIPEGQ--PDLTAHRLSTDPFVIVMPPDHPLL 184 Query: 183 GARSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 ++++ + P L L + T + +V Sbjct: 185 RRKTLRWEDVAPIPLIGPHKGNPIRDCLDTALAARGITLSRLHEVLLPLTMVGMVEAGLG 244 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 ++ + GL + ++ + L+ D +P R G L Sbjct: 245 IAVMSA-AVTRLTEALGLATVMPTDPVIHREISLLVHADRSLSPPAQRFRDLLMRNRGNL 303 >UniRef50_C6J497 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J497_9BACL Length = 306 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 60/297 (20%), Positives = 111/297 (37%), Gaps = 10/297 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ + F+ V A+ L ++QP LS I+ LE+ L L R K LT A Sbjct: 1 MEHRLLEYFIAVGEDLHFTKAAERLGITQPTLSHQIRLLEQELGTALIQRIGKKNYLTQA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +HA ++ E+ A+ +I Q G GQ+ IG L+ + FH+Q+P + Sbjct: 61 GSILLEHARRVIYEVEQAKLEIGQITGVQRGQLRIGCS---GNHLLEDKLISFHRQYPGI 117 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG- 183 ++ ++E L +LD + D L ++ + H Sbjct: 118 ELTVLELATEETRAGLLANQLDLGVVFL--PLQDEHIVSRPLFDEALVLVVSSQHAYAEL 175 Query: 184 -ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 +++Q+ + P + L +Q + + T + + +V + Sbjct: 176 PEVTLEQVAQLPLVLFPPKFYVRQLLDTACAEQGIEIRPVMELSTMESQVQMVIHHVGGT 235 Query: 243 KLPEEMGCDPL---HGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 LP G+ +P++E +P L+ RR + P + I E Sbjct: 236 VLPGSYARTLTSTNRRSGITFIPLAEPVPHKNVGLVYRRSTFMDPTLQAFIRHLTEE 292 >UniRef50_Q1IRM1 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRM1_ACIBL Length = 302 Score = 264 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 113/292 (38%), Gaps = 5/292 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + Q+ F+EVA+ G+ A + SQ A+S I++LE+ +LF R K V L+ A Sbjct: 1 MDFDQLLTFLEVAKLGNFSRAGEKVYRSQSAVSAQIRQLEQEYGERLFDRSGKIVRLSPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE ++A ++ + + + G ++IG + ++P + + + QQ PQV Sbjct: 61 GEVLLEYAQRMVALRNESLRAVADQGETPRGVLSIGANEATCLYVLPDIFTEYCQQFPQV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + ++ + G +D I T + + + HP Sbjct: 121 QITVYRNFSRKILQAVEDGVIDLGIATL--PVKSPSLKVHPIFRDRLELMVPVRHPLAAK 178 Query: 185 --RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 +I+++ +Y P +QL +L +V + + S V ++ Sbjct: 179 ESVTIEEIAEYPQIFPKTGY-TRQQLDKLFRPYNSKLRVAMEIPSVGLIKSFVVSGVGVT 237 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 L D + MLP++ + LI R D + I R Sbjct: 238 LLSSTFAQDEVRAGKAKMLPIAGVDMWRELGLIYRNDRTLPRSATAFIDLMR 289 >UniRef50_UPI0001C3192A transcriptional regulator, LysR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3192A Length = 343 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 58/284 (20%), Positives = 113/284 (39%), Gaps = 4/284 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+ FV VA + S A+ L+++QP +S ++ LE L QL R + V T+A Sbjct: 1 MELRQLEYFVAVAEEASFTRAAARLHVAQPGVSAQVRRLEAELGEQLLDRSGRSVRPTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + HA L + A + I + G + G++ IGM +S +++P +++ F + HP V Sbjct: 61 GVAVLPHARAALASVGAVRGAIEELTGLVRGRVAIGMVSSYPSAVLPDLLASFSRLHPDV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + E ++ L+ GELD + + + L ++ HP Sbjct: 121 EITLGEDNSDRLVQALQHGELDLALIGSARTGPPPGLATQTLTDEPLVAAVSHTHPLATR 180 Query: 185 RSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++ L L + P++ L A+ ++ Sbjct: 181 STLTVAALAGSPLMCLPRGTGIRTALDDACATAGVEPRIAFEASDPVPLALLAARGLGVA 240 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLT 286 LP + L + ++ P+ L R + +P Sbjct: 241 ILPASLAAA--RSGELHAIALTRPQPRGRIELAWRAEGPVSPAA 282 >UniRef50_C1F7X5 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7X5_ACIC5 Length = 305 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 75/292 (25%), Positives = 128/292 (43%), Gaps = 5/292 (1%) Query: 6 KIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAG 65 ++ IRAF+ VA+ + A++ L++SQ AL+ IQ+LEE L +LF R + V LTDAG Sbjct: 4 ELRHIRAFLAVAQHANFTRAAQELHVSQSALTVQIQQLEEALGVKLFDRNKRRVALTDAG 63 Query: 66 ESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVK 125 I+ + A R+ G G +++ + S++ ++ +SRF HP + Sbjct: 64 REVIAPLQRIVVDAEAIVSRTREITGLRRGVLSMAVLPSMASGILSTALSRFTAAHPGIM 123 Query: 126 VRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA- 184 + I + +I ++++ E+DF + T D E T L + F HP Sbjct: 124 IHIHDVVADQVIEKVKKEEVDFGVATVMH--ADKELTLMPLFTDRLFAFLPEQHPLSSRA 181 Query: 185 -RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSK 243 S++Q+ DY + S + + L D T S +SLV + Sbjct: 182 SVSLQQISDYPLVLMARGTSVRSMVDQALRDHGLTATAAYEANYMSTALSLVRAGFGIGI 241 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 LPE+ G Q LV LP+ +++ R+ +P ++ R Sbjct: 242 LPEDAGTMG-SAQNLVALPIVRPQLTRPIHVLMRKGRSASPAVQQMLQILRD 292 >UniRef50_Q7W708 Putative LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W708_BORPA Length = 298 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 62/277 (22%), Positives = 118/277 (42%), Gaps = 8/277 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + Q+R FV VA + S A+ L++SQP LS+ I+ LEE L A LF R +G++LT A Sbjct: 1 MDLKQMRYFVAVAEERSFSRAAERLHISQPPLSQQIKALEEELNAPLFHRLPRGISLTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + + + IL +R A ++ Q + G + +G +S L+P ++++ + P Sbjct: 61 GAALLKSSRAILANVRLAAQETTQIAAGMLGTVRMGTVSSALAHLVPYILTQVKRSMPGS 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 KV + E + + ELD + + ++L + F HP Sbjct: 121 KVELTEMSSREQTLAVLRDELDIGLVHT--PIDTADLRTRQILREPFYAAVPSQHPLASR 178 Query: 185 --RSIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + +L + + ++ L + +P++ S + +VA Sbjct: 179 EAVPVAELASEEFVFFPRTLASGLFDKMVSLCMNAGFSPKIHHTARHQSTMLQMVAMGLG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQR 277 ++ +P + ++ V LP++ LI R Sbjct: 239 VTIVPRSL--QRIYKGSAVFLPLTGTPHYLELSLIWR 273 >UniRef50_A0QNN2 Transcriptional regulator, LysR family protein n=3 Tax=Corynebacterineae RepID=A0QNN2_MYCS2 Length = 293 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 59/299 (19%), Positives = 112/299 (37%), Gaps = 8/299 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + ++ FV +A + A+ L +SQP LS+++ LE+ + LF R ++ + L Sbjct: 1 MHLDELSWFVVLAETEHVTDAAAELGISQPTLSRALARLEDEVGVPLFDRVNRRLQLNAY 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE +HA + E+R+A E I + G + + S + S +P ++ RF P V Sbjct: 61 GEILLEHARRTITEMRSATERIAAMRDPDTGLVRLAFLHSQAGSFVPDLLRRFRAHAPHV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI-- 182 + + +G ++ L G++D I + F + L ++ + GH Sbjct: 121 QFSLTQGAAHDLLERLAGGQVDLAITSPRP----EGFQWRGLYVERLCLAVPRGHRLASR 176 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++ D + P + EL + TP V LVA ++ Sbjct: 177 SRITLADAGDEPFVGLAPGFGLRQLTEELCAEAGITPHVVFEATEIPTMEGLVAAGFGVA 236 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQ 301 +P G + +++ K L D P R ++ Sbjct: 237 VVPVPHAGR--AEPGAEYIALAQASAKRQLGLAWPADRPLPPAAERFAQFVIRTTHDVE 293 >UniRef50_Q7WNC1 LysR-family transcriptional regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WNC1_BORBR Length = 297 Score = 263 bits (674), Expect = 4e-69, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 124/296 (41%), Gaps = 9/296 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + + FV +A + + A+ ++ Q LS++I+ LE L L R ++ V LT A Sbjct: 1 MNLRHVHYFVTLAEELNFTRAAARCHIEQAPLSRAIKALERELGLTLLIRNTRNVELTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G F A + LEEL R+ Q GQ+ I S L+P++I F + +P V Sbjct: 61 GRLFCDCARVALEELELGARRARRAQEGAIGQLTIAHVGSTVYELLPSIIRAFKRGYPLV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +RI + I L G++D P + +L + F HP G Sbjct: 121 DLRIRQLTTREQIPGLIAGDIDVGFVRVA--PDSGQLAAARLYAEPFVCAIPDWHPLAGR 178 Query: 185 RSIK--QLLDYSWT--MPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 S+ +L + M +P S ++Q+ +L P++ E + + LVA Sbjct: 179 ESVALGELASSPFIMLMRSPAPSLHQQVLDLCRKAGFEPRIAQEVEQIESTVGLVASGIG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 ++ +P + + + +P+ ++ + ++ R+ +P+ + + R Sbjct: 239 VALVPASLRKLSIRS--VCYVPLCDVAEQVEVWVAWPREQA-SPVAQAFLQCARDT 291 >UniRef50_Q46PT5 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46PT5_RALEJ Length = 300 Score = 263 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 64/302 (21%), Positives = 111/302 (36%), Gaps = 6/302 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 V + Q+RAFVEVAR G A+ L+++Q A S I+ELE L QL R ++ LT Sbjct: 1 MNVTLRQLRAFVEVARSGGFTAAAPKLHLTQSATSLQIRELESQLGLQLIDRSTRRFALT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 DAG F A I+ ++ + D R+ + G+I + ++ +L+P I+ F +P Sbjct: 61 DAGSEFLISAMRIVGDVEQSVADTRELVHKRRGRITVATTPLLASTLLPESIAHFLDAYP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 + VRI + + + G++DF + D +F LL + P Sbjct: 121 AITVRIADLPAEQIGRRVLSGDVDFGFGVF--PEEDPQFDRIPLLRHPLGVMVPSSWPLA 178 Query: 183 GARS---IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 + L + + + L + L Sbjct: 179 TRKRDLVWSDLEGQPLIAMSHATGMRTLIDQQLHQAGVQVNPRFEVAYLGTAVGLAEAGL 238 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 ++ +P + + P+ + + LI R +P A+ C Sbjct: 239 GVTVVPA-YVGKLMGSDRVRFRPLHKPVVHRQIELIVRAGRSLSPSAAAFRDCLAARCKM 297 Query: 300 LQ 301 L Sbjct: 298 LN 299 >UniRef50_C6D4H5 Transcriptional regulator, LysR family n=4 Tax=Bacillales RepID=C6D4H5_PAESJ Length = 303 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 126/298 (42%), Gaps = 7/298 (2%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + HQ+ F VA +GS A++ L+M+QPA++ +Q LE+ +L R +K + LT Sbjct: 1 MALNFHQLHIFYTVAERGSFSAAAQSLHMTQPAVTMQVQSLEDYFGTKLLQRSTKRIDLT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 +AG++ +A +E +R + + QL G++ +G +I ++P ++ F Q P Sbjct: 61 EAGKALMPYARRSIELIRDTDQAMSAFTKQLKGRLQLGASLTIGEYILPRLLGPFGQTFP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 ++ + + +I E+ +L F + + E ++ + + HP Sbjct: 121 EISISMKVMNTAQIIEEIINHQLTFGL--IEAPVNHPDMQMEAVMSDELKLIVPKDHPLS 178 Query: 183 GARS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTP---QVGVVCETFSACISLVAK 237 + + ++ DY + + + E L + P ++ + + A S V Sbjct: 179 KRQKVLLDEVADYPFVVREQGSGTRLVMEEQLKRKKIDPADLKIVMELGSTGAVKSAVEA 238 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 +S + E + L ++P+ + K +Y I + + + +T R Sbjct: 239 GLGVSFVSESSVKHEVALGLLHVIPIEDTRFKRQFYSIYLKSTLLPISAVTFLTFLRE 296 >UniRef50_B2SBJ3 ALS operon regulatory protein n=36 Tax=Proteobacteria RepID=B2SBJ3_BRUA1 Length = 299 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 63/302 (20%), Positives = 125/302 (41%), Gaps = 9/302 (2%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M +++ +R F+ VA +G+ A+ L + QP LS+ I++LE + LF R G Sbjct: 1 MDIPMELRHLRYFLAVAEEGNFTRAAAKLGIGQPPLSQQIRDLENEIGVMLFHRVPHGAE 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRS-LMPAVISRFHQ 119 LT AG +F + A+ + A+ ++ +G++++G AS + + ++ I F Sbjct: 61 LTAAGAAFLEEATATIASSEKAKLAAQRAARGESGRLSLGFTASSAFNPIVSGAIRHFRA 120 Query: 120 QHPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGH 179 + P+V++ + E +I L +GELD ++L ++ + H Sbjct: 121 KWPEVELFLTEMNTNLLIERLVRGELDTAFIR-PGLEDPANVRMKRLADEPMLVALPSHH 179 Query: 180 PAI--GARSIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLV 235 + L + + S Y ++ V + ++LV Sbjct: 180 RLAVYERLPLSALAGEPFVLFPRIVGLSLYDDIAAACRMAGFEMNVTQEAPQMPSVVNLV 239 Query: 236 AKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 A + +S +P + + G+ P+ A L + S ++P+ +LI+ R Sbjct: 240 AANLGVSIVPAAIAQ--IRLDGVTYRPIEGEPLVARLALASMK-SLRSPVHDNLISLLPR 296 Query: 296 EC 297 EC Sbjct: 297 EC 298 >UniRef50_D1WWA8 Transcriptional regulator, LysR family n=7 Tax=Streptomyces RepID=D1WWA8_9ACTO Length = 310 Score = 263 bits (673), Expect = 7e-69, Method: Composition-based stats. Identities = 64/282 (22%), Positives = 114/282 (40%), Gaps = 9/282 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +RAF+ VA + A+R L M+QP LS+ I++LE+ L QLF R ++ V LT A Sbjct: 1 MELRHLRAFLAVAEELHFGRAARRLQMAQPPLSQRIRQLEKELGVQLFHRNTRSVRLTGA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+F +L++L A R G++ IG + S +P + HP + Sbjct: 61 GETFLDPVRTVLDDLDTAVRAARSAGRGEYGRVTIGFAGASSHETLPRLTRAVRAAHPGL 120 Query: 125 KVRIMEGQLVSM-INELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 ++ + ++ ++ + G LD + E++ HP Sbjct: 121 ELVMTGQTYANVALSRVADGSLDLGFVRL--PVSRPGVEHRVIDEEELLCALPSDHPLAR 178 Query: 184 --ARSIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 A S+ L D + + L+E + TP+V ++LVA Sbjct: 179 HEAVSLADLADEPFVSFPANTGSTVRDALTEACESAGFTPRVVQEAPDSYTIMALVAAGV 238 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSR 281 ++ + GLV P++ + L R D+ Sbjct: 239 GVTL--TVTSVRHIQQSGLVYRPLTGPPIRRQAALAWRADNP 278 >UniRef50_C1BAS4 Putative LysR family transcriptional regulator n=2 Tax=Actinomycetales RepID=C1BAS4_RHOOB Length = 299 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 65/292 (22%), Positives = 119/292 (40%), Gaps = 8/292 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+R FV VA + + R A+ L+++QPALS+ I + E+ L LF R ++ V LTDA Sbjct: 1 MELRQLRYFVTVAEEMNFRRAAERLHIAQPALSQQISKFEKELRTTLFERTTRRVELTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +L E A + Q G + IG +S + ++PA + ++ P V Sbjct: 61 GRVLLDEGRRVLAEADHALAAVEQVAHGEVGLLRIGFVSSAALRIVPATVLALQKEWPGV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V + E ++ + G LD + + L + + HP G Sbjct: 121 QVELSESTTDRQLSAIADGILDIGLVR--EVDRAEGIVVRPLTREPLLVAMHSSHPFAGR 178 Query: 185 RSIK--QLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 S++ +L D + Y ++ L + F + LVA + Sbjct: 179 ASVRLVELRDERFLTFPRGQVSRLYDHIAALCHHAGFRLEAAQEAVQFPTLLGLVAANTG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQ 292 ++ +P + LH L + +S+ + + R D +Q P + Sbjct: 239 VTVVPASL--RALHLPDLRYVALSDAQAVSTVSVAYRADRQQIPAIRHFLDV 288 >UniRef50_A4FE82 LysR-family transcriptional regulator n=5 Tax=Actinomycetales RepID=A4FE82_SACEN Length = 294 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 122/294 (41%), Gaps = 8/294 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+ FV VA + A++ L+++Q LS SI+ LE L A+LF R ++ VTLT A Sbjct: 1 MELRQLEYFVAVAEECHFTRAAKRLHVAQSGLSASIRSLERELGARLFHRTTRNVTLTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + A L + +A++ + +G L G+++IG + +P V++ F HP + Sbjct: 61 GHALLHEARRALCAVDSARDAVAAVRGLLRGELSIGTLQCLHVVDLPPVLAGFVTAHPGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +VR+ +G + ++R G LD L + + C HP Sbjct: 121 EVRLRQGGSGDLAEQVRAGRLDLAFA-VRPARCPDGVLVHSLDTEPLVLACAGDHPMAER 179 Query: 185 RSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + ++L + + P + +L + +V + + + LVA ++ Sbjct: 180 DRVDPRELGEQPFVDFHPDWGTRDVVDRVLAETGVERRVALEVTDVHSLLELVACGLGIA 239 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 +P + +P++ P I + A+L+ + Sbjct: 240 LVPRSFSA---KNGQVRFVPLASPAPTWETVAIT--SDPTSTAAAALLRDVQEA 288 >UniRef50_A9BVL3 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=A9BVL3_DELAS Length = 299 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 75/300 (25%), Positives = 138/300 (46%), Gaps = 9/300 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+R F+ +A + A++ L++SQP LS +I++LEE L AQLF R SK V LT A Sbjct: 1 MELRQLRYFLVLAEELHFSRAAQRLSISQPPLSVAIRQLEEELGAQLFERTSKEVRLTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ A I+E+ + ++D+R + G+I +G S +P + F +HP V Sbjct: 61 GKHLRVQAQDIMEQAQRVRQDMRAIADGVQGRIRLGFVGSAIYRGLPEALESFRARHPLV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ ++E I L+Q LD + + L+ + F GH G Sbjct: 121 RIDMLELNSAEQIAGLQQERLDLGL--LHATRPAPGLQSHTLVSEPFMACLPAGHALAGQ 178 Query: 185 RSI--KQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 R++ +QL + + Y++Q+ ++ + TP + + + +S+V+ Sbjct: 179 RTLQVRQLAGERMVLFSRQVSPDYHQQIWQICQSEGFTPDLHHEVRHWLSVLSMVSLDQG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 +S +P + + GL +P+ P++ + Q PL SL+ R L Sbjct: 239 VSLVPSCL--QRVGFPGLAFVPIQGRHPQSQMQAMWHPGHVQ-PLVESLLAHLRDSVRRL 295 >UniRef50_B9XJ57 Transcriptional regulator, LysR family n=2 Tax=bacterium Ellin514 RepID=B9XJ57_9BACT Length = 301 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 64/295 (21%), Positives = 127/295 (43%), Gaps = 6/295 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R F+ VA + A+R L ++QPALS+ +Q+LE+ + L R +GVTLT Sbjct: 1 MELRHLRYFLAVADALNFTKAARQLRIAQPALSRRVQDLEDEIGVDLLKRSPRGVTLTAE 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F + +L+ + E +R G ++IG S + ++P ++ + + P V Sbjct: 61 GKLFLEKTRQLLKMADESVEQVRALARGQFGSLHIGYAPSPTVEILPPALAAYQRAFPHV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG- 183 V + + +++ L+ G L + FE L + + P HP Sbjct: 121 NVLLHDASRREIVDGLQDGTLQLAVLPEVVNMEAEGIEFEPLRSYPYYVALSPSHPLTRL 180 Query: 184 -ARSIKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 A ++++ + H YY + + TP++ V C++ S+ I+ V Sbjct: 181 KAIPLEKIANEPLVGFARHDYPDYYPFVERIFRPLGVTPKIAVECDSGSSLITAVETGRG 240 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 +S + G+ LV+ PV+ + + + ++ TP R+ Sbjct: 241 VSL--AMSVFKVVTGKRLVLRPVAGSKDEIPVGIARAKNGDLTPAGEKFCEFLRK 293 >UniRef50_A5VFC0 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=A5VFC0_SPHWW Length = 315 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 64/300 (21%), Positives = 116/300 (38%), Gaps = 12/300 (4%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 + + +R F+ VA + A++ L +SQP LSK I+ LE+ L +LF R S+ V LT+ Sbjct: 11 SMDLRHLRYFLRVADEMHFGRAAQRLGISQPPLSKQIRALEDELGVKLFDRTSRRVRLTE 70 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGAS-ISRSLMPAVISRFHQQHP 122 AG F A LE+ A R G++ +G S + + RF + +P Sbjct: 71 AGRLFEPEARRALEQADRAARIARLAHSAEIGRLGLGFTTSGPFIPFVARALHRFRRTYP 130 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINT-YYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 V++ + E I + +LD I Y + L +++ + R H Sbjct: 131 DVELILREQGRDEQIEGVLSRQLDIGIVRDYRTPVLPDGVVAQCLQQEEMILAVRDDHWL 190 Query: 182 IGA---RSIKQLLDYSWTM--PTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVA 236 I L D + P + + L ++ P++ + + + LV+ Sbjct: 191 ARRPQPPRIADLRDEPLVLYGPPNGTGFTEHFFALCEEAGFVPKIAHEARSLATLLGLVS 250 Query: 237 KSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 + + + M LH +V + P + +L+ +P A+ E Sbjct: 251 AGFGPTIIAQSMAR--LHVDNVVNRSFAAPSPS-SLWLVH--GEELSPTGAAFRRTILEE 305 >UniRef50_A3K7Z5 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Sagittula stellata E-37 RepID=A3K7Z5_9RHOB Length = 333 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 68/284 (23%), Positives = 126/284 (44%), Gaps = 8/284 (2%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++++ Q+R F+ VA + + A+ + ++QP LS+ I LE+ L +L R + V+LT Sbjct: 28 RIELRQLRYFLAVAEELNFTRAAEKMGIAQPPLSQQILVLEQQLRVKLLNRSRRHVSLTP 87 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 GE+F +A I+ + A E + + G +++ S +++P + F QHP+ Sbjct: 88 EGEAFILYARRIINNTQIAAELVGAIKRGEEGPLSVAAIFSSIYTVVPQLFEAFVAQHPR 147 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V+ + E + + LR+ +D I E LLE+ F + HP Sbjct: 148 VRFHLQEMTIGQQLVALREERIDLGI--LRGPIIHPEIETHTLLEEPFVVVVSKKHPLAK 205 Query: 184 AR--SIKQLLDYSWT--MPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 + Q+L +P+ + Y Q+ +L ++ TP + + LVA Sbjct: 206 QTILTADQVLSQPLIRVIPSVNRDYSHQMFSVLANRNTTPNIVHEVSDTHTLLGLVAAGM 265 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQT 283 +S +P + +H L +P+ E P + L +DS T Sbjct: 266 GISMVPASV--RSIHTDQLRYIPLREGTPTSTIQLAWLKDSDST 307 >UniRef50_Q1IX51 Transcriptional regulator, LysR family n=3 Tax=Deinococcus RepID=Q1IX51_DEIGD Length = 297 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 65/297 (21%), Positives = 114/297 (38%), Gaps = 10/297 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R FV +A + A+ + + Q ALS SI+ LE+ + L R ++ V LT A Sbjct: 1 MELRHLRHFVALAEEEHFGRAAERVFVVQQALSNSIKNLEDEVGVPLVLRTTRRVQLTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G F A L + E R+ G++ +G + ++ +P ++ F +P V Sbjct: 61 GREFLAGARETLAQAAQMVERARRAARGEVGRLTVGFVSGLAFGGLPEIVRAFRDLYPNV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 V + E LR G++D + D L + GH Sbjct: 121 SVDLRELTAQEQEAGLRGGQIDVGLMLL--PVRDPGLDSHPLWRQPLVAALPAGHALARK 178 Query: 185 RSIK--QLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 R ++ L D + H +Y+ Q+ TP V +SLVA Sbjct: 179 RRLRIGDLRDERFVFFPRHLRATYFDQVMRWCGAAGFTPNVVQEAIEIPTLLSLVAAGIG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRD-SRQTPLTASLITQFRRE 296 + LP + L G+V P+ + P + RRD + P+ + + + Sbjct: 239 V-FLP-IQFFERLSLPGVVYRPLDD-APVIEIVAVWRRDEAEGGPIVRAFLRVAQAA 292 >UniRef50_A0LNI4 Transcriptional regulator, LysR family n=4 Tax=Deltaproteobacteria RepID=A0LNI4_SYNFM Length = 302 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 126/298 (42%), Gaps = 7/298 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + IH++ F V GS A+ + ++QP +S+ ++ LEE L +L R + V T A Sbjct: 1 MDIHRLVVFCRVLEMGSFTKAAEAVCLTQPTVSEHVRALEETLGEKLIDRLGREVLPTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ YQ+A I++ A + + + +G L+G + IG ++P +I F + +P + Sbjct: 61 GKILYQYARDIIQLRDEAVQALEKFKGNLSGALLIGASTIPGTYVLPELIGSFKKSYPAI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + ++ G ++F + D E+ + + HP Sbjct: 121 QITLRITDSAEVVARTIDGGVEFGVIGAR--LEDRRIVLEEAFSDELVLAVFRDHPWAVR 178 Query: 185 --RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTP---QVGVVCETFSACISLVAKSD 239 S+++L + + +++ L+ +P + + A + Sbjct: 179 KSVSLEELAGEPFILRERGSGTRIVMNQALEAHGFSPTKLNIVAEMGSTEAIRQGIKAGI 238 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 +S L + L L +P++ I ++L+QR++ + +PL ++ + R + Sbjct: 239 GISILSHRAVAEDLRHGSLFAVPLAGIRFSRPFFLVQRKNRQMSPLCSAFLNHLRFQA 296 >UniRef50_Q47141 Hca operon transcriptional activator n=46 Tax=Gammaproteobacteria RepID=HCAR_ECOLI Length = 296 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 68/302 (22%), Positives = 125/302 (41%), Gaps = 10/302 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R FV VA+ + A+ L+ SQP+LS I++LE + L R + V LT A Sbjct: 1 MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVGVPLLVRDKRKVALTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE F Q A ILE+ A+ R+ + Q+ IG S +L+P V+ F + P Sbjct: 61 GECFLQDALAILEQAENAKLRARKIVQEDR-QLTIGFVPSAEVNLLPKVLPMFRLRQPDT 119 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + ++ ++R+GELD + Y E + +L ++ + HP Sbjct: 120 LIELVSLITTQQEEKIRRGELDVGL--MRHPVYSPEIDYLELFDEPLVVVLPVDHPLAHE 177 Query: 185 RSI--KQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + I QL ++ P GS + + P + V ++LV Sbjct: 178 KEITAAQLDGVNFVSTDPVYSGSLAPIVKAWFAQENSQPNIVQVATNILVTMNLVGMGLG 237 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 ++ +P M + + +V P++ +P A + ++ P I + + Sbjct: 238 VTLIPGYM--NNFNTGQVVFRPIAGNVPSIALLMAWKKG-EMKPALRDFIAIVQERLASV 294 Query: 301 QS 302 + Sbjct: 295 TA 296 >UniRef50_A0KPQ5 Transcriptional regulator n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KPQ5_AERHH Length = 307 Score = 260 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 75/297 (25%), Positives = 125/297 (42%), Gaps = 4/297 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 QIR FV VA S+ A+ L++SQ A++ +I+ELE L A LF R +GV+LT Sbjct: 1 MNFTFRQIRYFVAVADSFSVSRAAAELHISQSAVTSAIRELETELGAALFERNPRGVSLT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 G F HA IL + A + ++ Q G++ IG+ ++ + + RF + P Sbjct: 61 TQGHQFLLHARRILGAMTEAGQSLKAVAQQDQGRLTIGVTTLVAGYYLSEALGRFRRAFP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 V++ + E + + +++ GE+D I + F E L ++ HP Sbjct: 121 AVQIEVKEDEQPYLEHQIVNGEVDVGILMTNRTIRQEAFDTELLTRSPLRVWLAANHPLC 180 Query: 183 GA--RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 S+K L + T + + L P++ + + A SLVA Sbjct: 181 AESTLSLKALGEEPMISLTAD-QLDQIIGGGLRRYGIAPRIVLRTASVEAVRSLVASQLG 239 Query: 241 LSKLPEEMGCD-PLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 L+ LP+ L + + + E +P L+ RR SR I R + Sbjct: 240 LALLPDFAYRPWSLEQERVEARAIKEPIPAIDIGLVWRRGSRLEWTAREFIDIVRDQ 296 >UniRef50_Q2RHB2 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RHB2_MOOTA Length = 297 Score = 260 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 58/280 (20%), Positives = 112/280 (40%), Gaps = 7/280 (2%) Query: 9 QIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESF 68 Q+ F VA Q S A+R+L+++QPA+S IQ LEE +L R ++ VTLT+AG Sbjct: 5 QLLTFKAVAEQKSFSRAARVLHLTQPAISLHIQSLEEYFGTRLLDRNNRQVTLTEAGRVL 64 Query: 69 YQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRI 128 Y +A + ++ + G++ G + +G +I +P++ F +Q+P V++ + Sbjct: 65 YNYALELSRLYDEVKKALADISGKVKGNLVVGATLTIGEYFLPSIAGEFKRQYPDVEITL 124 Query: 129 MEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARSI- 187 +I GELD + E L + + + P H G R I Sbjct: 125 RIANTQEIICRTLDGELDLAL--IEGQAKHPNLIQEDLFQDELVLIIHPEHRWAGRREIT 182 Query: 188 -KQLLDYSWTMPTPHGSYYKQLSELLDDQAQ---TPQVGVVCETFSACISLVAKSDFLSK 243 ++L + + + L T +V + + A V ++ Sbjct: 183 PEELREEPLILREEGSGTRQITEAGLRKAGLELSTLKVVMELGSTQAIKEAVEAGLGVAI 242 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQT 283 + + L + + I + +++ R ++ Sbjct: 243 ISRLAIKKEIRYNLLREVRLQGIDFRRTFHIAYNRHKFRS 282 >UniRef50_C5BEX8 Transcriptional regulator, LysR family n=12 Tax=Enterobacteriaceae RepID=C5BEX8_EDWI9 Length = 312 Score = 260 bits (665), Expect = 5e-68, Method: Composition-based stats. Identities = 64/293 (21%), Positives = 118/293 (40%), Gaps = 6/293 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + +R FVEV RQ S A+ L ++QP +SK ++ LEE L L R +G+ LTD+ Sbjct: 1 MDVRTLRYFVEVVRQHSFTRAAEKLFVTQPTISKMLRNLEEELGCTLLIREGRGLRLTDS 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G YQ A IL++ + ++ G + +G+ + M +I F Q++P + Sbjct: 61 GNVVYQRAQTILDQFGQLRTELDDLGALKKGSLKLGIPPMVGTQ-MAGLIGEFRQRYPGI 119 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ I E +++ + GELD + P D L + P + Sbjct: 120 ELHIAEFGGLTVEQAVLSGELDLALTALSAQP-DPAIASLPLFSHPLYVLLPRQAPWLTR 178 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++ L + + + Y+QL + PQ+ V + ++V ++ Sbjct: 179 SALGMTDLAQQNILLYNEDFALYQQLMQAFSAAGVKPQIAVRSGQWDFLAAMVQAGVGIA 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 LP+ + L LP++ LI + + I + R Sbjct: 239 ILPQPICQRLDPHSLL-WLPLA-PTLMWRLGLIWCHGRYLSHSAQAWIARCRE 289 >UniRef50_B8IJK2 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IJK2_METNO Length = 306 Score = 260 bits (665), Expect = 6e-68, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 114/296 (38%), Gaps = 9/296 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + +R FV +A Q A+ +LNM+QP LS+ I+ LE+ L LF R ++ + LT A Sbjct: 1 MDLRHLRYFVVLAEQRHFGRAAELLNMAQPPLSQQIKALEDELEVTLFDRSTRPIELTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + + A IL + AQ R+ G + IG+ S + +P V+ F + P + Sbjct: 61 GRTLLREARQILHHVSRAQAATRRAGQGQDGHLVIGVTGSAAMEFLPPVLLAFRARWPDI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG- 183 ++ + E I L +GE+ D + + F + HP G Sbjct: 121 RLSLREMSSPEQIAALERGEIHIGFVR--PPVLDDRLNVRLVHQDPFVVALPGDHPQAGV 178 Query: 184 -ARSIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + L + + P + + + P+ + ++LV+ Sbjct: 179 EGVRLADLNGTALIIFDPAEAPGFRDLIIHVCRTAGYVPETLESAPQMTTMLALVSAGLG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 + +P L + +V P+ + Y + RD L L++ Sbjct: 239 FALVPRSA--RRLALERVVFRPLLDPCAAVELYAVWSRDKAV-RLAEELVSVIDEA 291 >UniRef50_C1A9Z7 LysR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9Z7_GEMAT Length = 296 Score = 259 bits (664), Expect = 7e-68, Method: Composition-based stats. Identities = 73/295 (24%), Positives = 134/295 (45%), Gaps = 5/295 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I +RAF+EVA G+ A+R + ++QP+LS IQ LE+ L LF R +GV LTD Sbjct: 1 MDITLLRAFLEVADAGAFSRAARRIGIAQPSLSLQIQRLEQQLGTTLFERHGRGVALTDV 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ Y A I++++RAA+E +R+ + G I +G +I+ ++PA + R +HP Sbjct: 61 GKGLYPRARRIVDDVRAAEEAVRREVAEGFGSITVGAIPTIAPYVLPAALERLQHRHPGA 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA--I 182 +V + E +++ LR+G +D I + L + + HPA Sbjct: 121 RVVLREDYSAVLVDLLREGAIDVAIAAL--PYDFGTLPQDVLGSEMLLVAVPALHPAARA 178 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 G ++ QL D P +Q++ D + P V + +V LS Sbjct: 179 GKITVAQLQDAPTVTLDPVHCLGEQVAGFCDARQVNPSVVCRSAQLTTVFEMVGAGMGLS 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 +P+ + ++P++++ + + RD + + + + R+ Sbjct: 239 IVPQMAAAKH-NTSRCAVVPLADMALERDIIALWPRDRAPSKVAMTFVDCVRQVV 292 >UniRef50_A3VLP1 LysR family transcriptional regulatory protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VLP1_9RHOB Length = 325 Score = 259 bits (664), Expect = 7e-68, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 118/294 (40%), Gaps = 9/294 (3%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 +V++ Q+R F+ VA + + A+ + ++QP LS+ I LE L A+LF R + V LT Sbjct: 9 KVELRQLRYFLAVAEELNFTRAAERMGIAQPPLSQQIISLEHQLGAKLFIRSCRRVKLTA 68 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 G +A I+ A E IR GQI +G S SL+P ++ F HP Sbjct: 69 EGIELQAYARRIINTTMLATESIRSIANGKNGQIALGSVCSAIHSLVPHILPPFAALHPG 128 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V+V + E + L + +D I + EF + L + F P Sbjct: 129 VRVHLQEMTVKEQFRALNEERIDIAIVR--EPMATTEFATQPLFTEPFVAAVNRNSPLAR 186 Query: 184 --ARSIKQLLDYSW--TMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 S++Q+ + + Y + L +Q V + + LVA Sbjct: 187 MNRLSLEQIAREPLVQVYRSANREYSDHMFSALMEQGYELNVVCEASDMHSLLGLVASGI 246 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 +S +P + + ++ +P+S+ + + L ++ TP + Sbjct: 247 GVSLVPASLV--NIQTANVIYVPLSDDVQSSTLSLAWNPEA-LTPSMDQFLKSV 297 >UniRef50_A0K8T5 Transcriptional regulator, LysR family n=55 Tax=Proteobacteria RepID=A0K8T5_BURCH Length = 308 Score = 259 bits (663), Expect = 9e-68, Method: Composition-based stats. Identities = 66/302 (21%), Positives = 125/302 (41%), Gaps = 9/302 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 V++ Q+R FV VA + A++ L +SQPALS I++ E+ L QLF R +K V LT+A Sbjct: 9 VELRQLRYFVAVAEELHFGRAAKRLFISQPALSFDIRKFEDALGVQLFSRTNKTVALTNA 68 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE A +L + A+ + LAG++ IG S+ +P + RF +P V Sbjct: 69 GEVLLGEARRLLLQADEAERLTVRSASGLAGRLRIGFVHSMLYRGLPDAVRRFEADYPGV 128 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V + E + + +++G++D + G + E + + F HP Sbjct: 129 EVVLSEMNTHAQVQAIQRGQIDLGYAHW--GHFPPEVESVAVYAEPFVCCLPAAHPLARR 186 Query: 185 R--SIKQLLDYSWTMPTPHGS--YYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 R ++ L + + + Y+ + + +P + + +S++ Sbjct: 187 RQVALATLATEPFILFPRDAAPHYHDLIIAQCVNAGFSPLIRHEARLWQTILSMIEFGMG 246 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 ++ +P L LP+ + ++ L +R P+ R L Sbjct: 247 IALVPR--VLQQAKSDRLAFLPLKDASLESR-TLALKRSGTAEPVALRFAGYVRASIDAL 303 Query: 301 QS 302 + Sbjct: 304 PA 305 >UniRef50_A1WVW1 Transcriptional regulator, LysR family n=11 Tax=Proteobacteria RepID=A1WVW1_HALHL Length = 318 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 61/298 (20%), Positives = 121/298 (40%), Gaps = 5/298 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + + Q++ F VAR S A+ L ++QPA+S I++LE+ + LF + K + LT Sbjct: 1 MNITLRQLQVFESVARHLSFTRAAEELYLTQPAVSMQIKQLEQQVGLPLFEQIGKRIYLT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 +AGE ++A I ELR + + +G +G++ + AS + +++ F ++ P Sbjct: 61 EAGEEVRRYAQRISAELRELADGLEALRGLNSGRLRL-TVASTANYFATDLLAAFTRRQP 119 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 V ++ +I ++ E+D + + P + E + I P HP Sbjct: 120 GVTFQLEVTNREGVIRRIQDNEMDLAV--MGRPPEGLDVAAEAFMPNPLVIIAAPDHPLA 177 Query: 183 G--ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 +++L D + + + +L+++ + G+ + A V Sbjct: 178 DGSPIPLERLQDELFVLREQGSGTRNAVQRVLEERGMNLRGGLEMSSNEAIKQSVQAGLG 237 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 L + L L +L V + +YL+ R R +P + E Sbjct: 238 LGVVSIHTVALELELGRLRVLNVEGFPLERQWYLVHRSGKRLSPAAEAFRQFILDEAH 295 >UniRef50_C4L1Y9 Transcriptional regulator, LysR family n=2 Tax=Exiguobacterium RepID=C4L1Y9_EXISA Length = 294 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 123/294 (41%), Gaps = 7/294 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ +++ F+ VAR S A+ L+++QP LSK+I+ LE+ L +LF R+ + + LTD Sbjct: 1 MEFREMQYFIAVARAKSFTRAAEALHVTQPTLSKTIRHLEQELGVELFDRQRRQIELTDV 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+ + L++ +L + G I +G+ I ++ FH +P + Sbjct: 61 GEALMLESELLIRQLEDLPNHVFDITNSKRGLIRLGLPPLIGSLFFTKFLTVFHSSYPNI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V I E ++ + L +GELD P F + ++ + HP Sbjct: 121 RVEITEAGGHTLEHALEKGELDVIATVL---PTSSTFEETPFVTEELYAYLPERHPLASR 177 Query: 185 RS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + +++L + + T S + + + TP++ + VA+ + ++ Sbjct: 178 KQLLLEELASEPFVLFTDEFSLHHVVRTACEQAGFTPRLIGESGQWDFLCMSVAQGNAVT 237 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 LP + ++ G+ + + + +P L + T I E Sbjct: 238 ILPRSIM-QEMNIYGVKAILLKQRIP-WQLGLATAKGRYLPYATREFIRYLTEE 289 >UniRef50_Q46UX6 Transcriptional regulator, LysR family n=4 Tax=Cupriavidus RepID=Q46UX6_RALEJ Length = 332 Score = 257 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 99/300 (33%), Positives = 156/300 (52%), Gaps = 3/300 (1%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 +++ QI+ F+ VA GSIR A+R ++S PAL+KSI++LE+ L L R ++GV L+ Sbjct: 3 SMRLSQIQDFIAVAEGGSIRAAARTRDVSAPALTKSIRQLEDELHVPLLTRTTRGVVLSH 62 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 GE+F + A LI E R A E++ Q G G + IG+ + L+PA ++RF +QHP+ Sbjct: 63 YGEAFLRRARLIATEARRATEEMTQMLGARTGTVRIGVTGGPAHLLLPAALNRFRRQHPE 122 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V+V I G+ + +LR G +D ++ DH+F E L + HP Sbjct: 123 VQVYIDSGRSAVHLQDLRAGLIDVAVSPIPDEGIDHDFICEPLYNNDSVVVAHQDHPLRH 182 Query: 184 ARSIKQLLDYSWTMPT-PHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAKSDFL 241 AR++++L+ W + T + + Q P+V V C+TF+ +L+ L Sbjct: 183 ARTLRELVGSEWILTTCRMHGPGAAIMDAFRAQDLPLPRVAVRCDTFNLIQALLQNRRLL 242 Query: 242 SKLPEEMGCDPL-HGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 + ++ D + GL +LP+ + LP LI R DS P+ AS Q RRE YL Sbjct: 243 CMVARQLMQDRVGASTGLAVLPIEDPLPSHTVCLIYRADSPMPPVVASFAAQLRREAHYL 302 >UniRef50_B8DKN9 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=B8DKN9_DESVM Length = 699 Score = 257 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 69/292 (23%), Positives = 122/292 (41%), Gaps = 4/292 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R F VAR S A+ LN +Q +S I LE L +LF R + V LT+A Sbjct: 1 MELRDLRTFAAVARLLSFHRAAAELNAAQSTVSARIAALETELGVRLFERLGRRVALTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE Q+A+ +++ A+ + G + + + S+ +P VI+ F ++HP+V Sbjct: 61 GERLVQYAAKLIDVEDEARAWVTGESRL-RGLLTVRVPESLCAYRLPPVIAAFRRRHPEV 119 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + + L + +LRQG D + E L + + P HP Sbjct: 120 ALHLTACTLNGLEKDLRQGITDLAFV-MADSVRGGDLNVEALGVEPLVLVAAPHHPLAAR 178 Query: 185 RSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + + L + + T +Y + E L + P G+ + SA VA ++ Sbjct: 179 DRVVARDLHGITLVLSTTDCAYRTVIEEALAAEGIQPAAGLEFSSASALRGCVASGVGIT 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 LPE D L L L ++ + A +++ R +P + + R Sbjct: 239 LLPEAAVRDELRAGTLRALAWADQPFETAVLMVRHRGKWVSPYMDTFMELCR 290 >UniRef50_A1WHL2 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=A1WHL2_VEREI Length = 305 Score = 257 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 71/302 (23%), Positives = 130/302 (43%), Gaps = 5/302 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + +RAFV VA GS R A++ L++SQPALS+ +++LE+ + +LF R ++ V L+ Sbjct: 1 MNFDLSDMRAFVAVADLGSFRAAAQTLHISQPALSRRVEKLEQAMGFRLFERTTRKVELS 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 G SF A +L EL A + +L GQ+ + S L+ + F ++ P Sbjct: 61 AIGRSFVPKARHVLSELENALLGMTDMSDRLRGQVTVACVPSSVPHLLAGAVEAFQRKFP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 +++VR+++ ++ + + E DF ++ Y G + + F+ L+++ F + C PGHP Sbjct: 121 RIRVRLIDETATEILLAVVRSEADFGVS--YWGAQEPDLEFQGLVQEPFVLACLPGHPLA 178 Query: 183 GARS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 R +L + P + + L A P+ A +SL+ Sbjct: 179 RKRRVKWAELAQHDCVTLPPGTGNRMLIDQALSTVAYPPRWTCEARHVPALLSLIEAGVG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 + +P G L + + E +I+RR P + Sbjct: 239 VGAVPRFAIRGG-QGATLASVRLVEPEVTRTIGVIKRRARPLMPAAQAFHDLLVAAHRAS 297 Query: 301 QS 302 + Sbjct: 298 SA 299 >UniRef50_Q4ZY05 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Pseudomonas syringae pv. syringae B728a RepID=Q4ZY05_PSEU2 Length = 298 Score = 257 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 127/294 (43%), Gaps = 4/294 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + +R FVEV RQGS A+ +++++Q ++SK+++ LE+ L L R LT A Sbjct: 1 MNLRTLRTFVEVVRQGSFSQAADVVSLTQSSVSKAVKTLEDELGTPLLSRIGHRSELTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE Y+ A +L E ++ +G G + IG+ S +L A+ +++ ++P + Sbjct: 61 GEIVYRRALTLLAERNDLLTELNDLRGLKGGVLRIGLPPVGSGALFAAMFTQYRARYPDI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +++ E + L GE++ + EF ++ + + + HP Sbjct: 121 DIQLTEHGASKLHECLASGEVELA-ALLKMNSFSEEFDYQDVRIEPVVVVMAENHPLAKR 179 Query: 185 RS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + I+ L + + + + + D + TP+V + LV+ ++ Sbjct: 180 KRVVIEDLAETPFILFEAGFALNTMIKLACDRKGVTPKVTARSGQVDFIVDLVSAGLGVA 239 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 LP + H G+ ++ ++E L R+++ +P + + R Sbjct: 240 FLPRMLAQKHYH-DGIRLVALNEPDTDWHMVLAWRKNAHLSPAAEAWLALARET 292 >UniRef50_B8IWD6 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IWD6_METNO Length = 304 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 77/299 (25%), Positives = 135/299 (45%), Gaps = 3/299 (1%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M ++K Q+ + ++ S+R A+ LNM+QP +K +Q LE + LF R +G+ Sbjct: 1 MLRRLKSRQLLLLIALSEARSLRKAAAALNMTQPTATKLLQNLENNVGLALFERGRRGMQ 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 T GE +HA L+L +L + +++ G+I IG S L+ ++R QQ Sbjct: 61 PTIYGEVIIRHARLVLADLNRTRLELQSLSSGGTGRIRIGAVISAIPVLLARAVARLKQQ 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 H + V I G +++ L +GELD + EF +E+L E+ I R GH Sbjct: 121 HSGLSVTIDVGTSDALVPALAKGELDVLLARPLVLADRPEFNYEELTEEPIQIVARAGHA 180 Query: 181 AIGARSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQ-TPQVGVVCETFSACISLVAK 237 + ++ L +WT+ P K L + P+ V + I+L+ + Sbjct: 181 LAASERLRLGDLAGSAWTLLPPGTPMRKVLEPIFAQIGPGEPRNVVETSSIMTMIALLQE 240 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 S+ L+ +P ++ L LP+S +Y ++ RRD +P T + + + Sbjct: 241 SEMLAVMPADVTNFNTRHGLLCRLPISLPPIMGSYGIVTRRDRPLSPSTTTFLQHLKAT 299 >UniRef50_B4CXF3 Transcriptional regulator, LysR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXF3_9BACT Length = 309 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 68/280 (24%), Positives = 113/280 (40%), Gaps = 5/280 (1%) Query: 15 EVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHASL 74 VAR G+ A+ +SQP+LS+ IQ+LEE L +LF R + LT GE+F + A Sbjct: 26 AVARAGNFTRAAEQCRVSQPSLSQQIQKLEEELGERLFDRMKRQTKLTSYGEAFVRRAVR 85 Query: 75 ILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQLV 134 ILEE A + + L+G + IG+ +I+ L+P IS F +++P V+V + E Sbjct: 86 ILEEAEMALREATDAKSLLSGMLTIGVLPTIAPYLLPEAISAFARKYPGVEVVVQEDTTG 145 Query: 135 SMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARSI--KQLLD 192 ++ L E+DF I D F ++L ++ + GHP R++ L Sbjct: 146 HLLKHLTTYEIDFAIA--SNPIEDSRFEIQELFAEELLLALPAGHPLARKRTVPASALKG 203 Query: 193 YSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSKLPEEMGCDP 252 + Q+ + + P V +LVA LS +P Sbjct: 204 ERLIVMREGHCLGDQVLGFCEHREMKPTVSFRSAQLETIYALVAAGLGLSLIPAMAAATE 263 Query: 253 LHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQ 292 L + + P+ + + + Sbjct: 264 -RANALELRSIQAPRPERKILAVWPKQRPLGRAARVFLDL 302 >UniRef50_Q475G5 Regulatory protein, LysR:LysR, substrate-binding n=9 Tax=Betaproteobacteria RepID=Q475G5_RALEJ Length = 304 Score = 257 bits (657), Expect = 4e-67, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 116/294 (39%), Gaps = 6/294 (2%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + Q+R F+ VA G A+ + ++Q A+S+ + ELEE L +L R ++ V LT Sbjct: 1 MNYTLRQLRVFLAVAETGGFSRAADAVGLTQSAISRGVAELEESLGVRLLDRTTREVVLT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 AG++ +L +L ED R+ G++ I +IS LMP ++ Q+P Sbjct: 61 HAGQALAPALERLLGQLDDTLEDTRELGEHYRGRVVIAGAPTISARLMPMYVAACAAQYP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 ++++ + + I ++R G +DF + T E L+ F CR HP Sbjct: 121 EIRLTVRDNVQADGIEQVRAGGVDFGV--LIDPLVHDGLTIEPLVTDPFCFVCRRDHPLA 178 Query: 183 GARS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 ++ L + + + P+V ++ +V Sbjct: 179 QEKTVPWSALDGMRLVLLDFASGSRPLIDRVFGRHGIVPRVVQELGHSASVFGMVEAGIG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 S LP P LV P+ + +++R D +P ++ R Sbjct: 239 ASVLPTYSLPLPAASP-LVWRPLV-PREERRIVMVRREDRSLSPAAEAVWALVR 290 >UniRef50_B8IDW8 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IDW8_METNO Length = 305 Score = 256 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 65/304 (21%), Positives = 120/304 (39%), Gaps = 11/304 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + Q+R F +A + A+R L++SQP LS +I++LEE L A LF R S+ V LT A Sbjct: 1 MDLRQLRYFAVLAEERHFGRAARRLSLSQPPLSHAIRQLEEELGATLFTRTSRQVALTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + + A IL+ A+ + G++ IG S + +++ + P + Sbjct: 61 GTALQREAKAILQRAADARVLVHDIACGRRGRLRIGFSGSTVYRGLSHILTAMRTEAPDI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG- 183 KV + E + L ELD + P + F GHP Sbjct: 121 KVALREMNSAEQVEALLHDELDAGFVHLRERP--EGLDGILFHAEPFVTCLPVGHPMAAT 178 Query: 184 ----ARSIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAK 237 + L + + + YY+ + + P+V + +LVA Sbjct: 179 PDPSETRLIDLQHEDFVLFSRTVSPDYYESILAICRTAGFLPRVRHEVRHWLTVAALVAH 238 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 ++ +P+ + L G+V LP+ ++ + + + + + + + Q R Sbjct: 239 GAGVALVPQALAGSQLA--GVVFLPIPPSPIQSETWCVWKASAPAPGILETFLPQVRAAM 296 Query: 298 GYLQ 301 L Sbjct: 297 KDLH 300 >UniRef50_Q7WCW0 Probable LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7WCW0_BORBR Length = 305 Score = 256 bits (656), Expect = 6e-67, Method: Composition-based stats. Identities = 63/298 (21%), Positives = 111/298 (37%), Gaps = 7/298 (2%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 V Q+ AF+EVA S A++ L+++QPAL+ IQ+LE L LF R +G LT Sbjct: 1 MNVTFRQLTAFIEVASSRSFSQAAQALHVTQPALTAMIQKLEAQLGVVLFTRTRRGAELT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 G IL L ED+R G + + S+S + +P++I+R Q +P Sbjct: 61 TTGRELLPELQRILANLEVVIEDVRGAASPRGGTVTLACIPSLSNTWIPSLIARVEQAYP 120 Query: 123 QVKVRIMEGQLV--SMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 ++KV + + S+ LR G++D+ + F+ L + HP Sbjct: 121 RIKVILKDAMTENRSIHEMLRTGDIDYGVG--SPSVEQDGLEFDLLAHDELVAVVPQDHP 178 Query: 181 AIGA--RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 +L + + + E + + + I +V Sbjct: 179 LARRTLVRWSELAESPLIGMSYQSHVRMLVDEAFAANGISKRPKREVSLITTAIGMVRAG 238 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 +S LP + GL +L + + + +P L+ + Sbjct: 239 LGVSVLPTTAIEVC-NVAGLKVLRLHAPRVRRPLGFLHLPTRSLSPAARLLLRFVKDA 295 >UniRef50_B2JVU4 Transcriptional regulator, LysR family n=43 Tax=Proteobacteria RepID=B2JVU4_BURP8 Length = 322 Score = 256 bits (656), Expect = 6e-67, Method: Composition-based stats. Identities = 71/297 (23%), Positives = 131/297 (44%), Gaps = 5/297 (1%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M ++ ++AF V GS R A+ +N+SQPALS+ I +LEE L +LF R ++ VT Sbjct: 1 MGINFDLNDLQAFRAVVELGSFRKAAEAVNISQPALSRRIDKLEEALGVRLFERTTRSVT 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT G F A +L++L A IR G + I S++ +P ++ +H++ Sbjct: 61 LTTVGRVFAPSAEQLLDDLDVALLGIRDVSSSRLGHVTIACVPSVAYYFLPGAVASYHRR 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P+++V+I++ ++ + GE DF ++ G + + F+ LL+++F CR HP Sbjct: 121 FPRIRVKILDSSANDVLAAVISGEADFGVSFM--GSQEPDVEFKMLLQERFVAACRRDHP 178 Query: 181 AIG--ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 + +L ++ + L + L + + + LV Sbjct: 179 LARKKRVTWNELYEHEYVSVDKTSGNRLLLDQALGAVSPRMPSVCETRHVTTMLGLVEAG 238 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 ++ +P M + L +P+ E + K +++RR TP Sbjct: 239 LGVAAVP-SMAMPGRNHHILTSVPLVEPVVKRRVGIVRRRGRPLTPAAQEFHKTIVE 294 >UniRef50_B1Y5W5 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=B1Y5W5_LEPCP Length = 316 Score = 256 bits (656), Expect = 6e-67, Method: Composition-based stats. Identities = 64/295 (21%), Positives = 123/295 (41%), Gaps = 6/295 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 V Q+R F EVAR S A+ L+++ PA++ ++ELE + LF R + V+LT A Sbjct: 4 VTFRQLRVFTEVARHLSFVRAAEALHLTPPAVTMQVKELESAIELPLFDREGRKVSLTTA 63 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE F +A +L L+ A + + + + +G +++GM + ++ +P +++RF +HP + Sbjct: 64 GEYFLVYAKRLLSTLKEADDAMARFRKVESGVLSVGMVGT-AKYFVPQLLARFRIEHPGI 122 Query: 125 KVRIMEG-QLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP-AI 182 ++++ G ++ L+QGE+D I + P + E PGHP Sbjct: 123 ELKLQVGANREQLVALLQQGEVDLAI--MGRPPREMATRAEPFAAHPHVFIAPPGHPVLA 180 Query: 183 -GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 G ++ +L Y P + + ++ + + V L Sbjct: 181 QGRTTLSELASYPLIAREPASGTRALMDRFFQEHRVELRIAMEMPSNETIKQAVMAGMGL 240 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 S L L L ++ V + ++ + +P +L Sbjct: 241 SFLSLHTIGLELRCGLLELVHVENAPIVRTWNIVHMQSRLLSPAAEALRYFMLEH 295 >UniRef50_B0C1S6 Transcriptional regulator, LysR family n=2 Tax=Cyanobacteria RepID=B0C1S6_ACAM1 Length = 298 Score = 256 bits (656), Expect = 6e-67, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 130/297 (43%), Gaps = 9/297 (3%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M ++ Q+++FV +A + A+ L+++QPALSK I LE+ + QLFFR + VT Sbjct: 1 MVCSIEFRQLQSFVVLAEELHFGRAADRLDITQPALSKQILVLEKAVGVQLFFRTKRTVT 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT AG++F A +L + A R+ GQ++IG + +++++P ++ +F Q+ Sbjct: 61 LTHAGQTFLHQARQLLLQRDQAILLTRRTGDGEIGQLSIGFTKTATQTVLPQLLRQFVQR 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 +P+V + + E + + L Q +D + + +L + F P HP Sbjct: 121 YPEVDLDLRELATEAQVTALNQDNIDVAF--LHPPIDQRGLQLQIILAESFVAVLPPQHP 178 Query: 181 A--IGARSIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVA 236 + A ++ + + Y ++ P + T + LVA Sbjct: 179 FVHLDAIPLEAFANEPLIVHPRREGPILYDGFQQVCQRAGFQPNIIKESITLQTRLCLVA 238 Query: 237 KSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 ++ + + + L G +V P+ + + + R+++ P+ + + Sbjct: 239 AGLGITFVSDRL--QALVGTNVVCRPIQDCPIQLEFGAAWRQNAA-NPVLQNFLELL 292 >UniRef50_Q0K6D4 Transcriptional regulator, LysR-family n=2 Tax=Cupriavidus RepID=Q0K6D4_RALEH Length = 301 Score = 256 bits (655), Expect = 7e-67, Method: Composition-based stats. Identities = 59/300 (19%), Positives = 117/300 (39%), Gaps = 5/300 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 V + Q+RAF+ VA++ A+ L++SQ ++S I ELE L +LF R ++ + +T Sbjct: 1 MNVSLRQLRAFIAVAQERHFTRAAEKLDLSQSSVSALIHELEGNLGLKLFDRHTRQLHIT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 AG + ++ + E+ + + G+++I + + ++P VI F HP Sbjct: 61 QAGAELLPLVKKAVADIDSVIENSSELRTLGRGRVSISASSIQAALMLPRVIREFCVSHP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 VKV + + + + GE+DF I T +G + + +L+ F I HP Sbjct: 121 GVKVELHDVSEHEVTKMVSSGEVDFGIGTIPEGQ--PDLSAHRLMSDPFVIVMPAHHPLR 178 Query: 183 GARSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 ++++ + P L L + + Q + +V Sbjct: 179 RRKTLRWEDVAGLPVIGPHKGNPIRDCLDTALAARGISLQRVHEVFLPLTMVGMVDAGLG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 ++ + GL + ++ + L+ D +P + R L Sbjct: 239 IAVMSA-AVTRLTSALGLATVMPTDPVIHREISLLVHADRSLSPPAQAFRDLLMRYRAKL 297 >UniRef50_B2JUD8 Transcriptional regulator, LysR family n=12 Tax=Burkholderia RepID=B2JUD8_BURP8 Length = 298 Score = 256 bits (655), Expect = 7e-67, Method: Composition-based stats. Identities = 68/299 (22%), Positives = 118/299 (39%), Gaps = 9/299 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ IR F+ VA + ++ A+ L + QP LS+ I LE+ L +LF R GV LT+A Sbjct: 1 MELRHIRYFLAVAEERNVTRAAERLGIGQPPLSQQIHALEDELGVRLFRRTGHGVVLTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRS-LMPAVISRFHQQHPQ 123 GESF A IL + R A E+ + GQ NIG S + + ++ +I + Q +P Sbjct: 61 GESFAADAKRILHDTRLAVENAQSAGRGEIGQFNIGFTGSAAFNPVVSKLIRAYRQAYPN 120 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V + + EG ++ L +D F + + I H Sbjct: 121 VTLTLAEGNTAQLLAYLDDDRVDVAFVRLGSQSP-AGVQFHHIAIEPMKIVLPATHRLAK 179 Query: 184 AR--SIKQLLDYSWTMPTPHGS--YYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 R ++ L + + M S + + + P G S+ ++LVA Sbjct: 180 KRKIALSALAEDPFVMLPREASPTLHDVIVGACREAGFEPIAGQQAPQLSSVVNLVAAEF 239 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 +S +P + + +G+V V L R +S + + + Sbjct: 240 GVSLVPASVCQ--IQVEGVVYTDVLGSSISIRLALASRIESTPAKTA-NFLEKALAFAS 295 >UniRef50_A0AYH9 Transcriptional regulator, LysR family n=148 Tax=Proteobacteria RepID=A0AYH9_BURCH Length = 326 Score = 256 bits (655), Expect = 7e-67, Method: Composition-based stats. Identities = 66/279 (23%), Positives = 124/279 (44%), Gaps = 10/279 (3%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 +++ +R FV VA + + A+ L+++QP LS+ IQ+LEE L LF R ++ + LTD Sbjct: 21 NMELRHLRYFVAVAEERNFTRAAERLHIAQPPLSRQIQQLEEALGVPLFERTARPLKLTD 80 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 AG FY HA +L + + ++ +++G S ++P +I RF ++P Sbjct: 81 AGRFFYSHAVQLLAQTTELESMTKRVGKIER-SMSVGFVGSTLYGMLPKIIRRFRSEYPA 139 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V++ + E + I L++G +D D L E++ + GH Sbjct: 140 VELSLHEMSTMDQIKALKEGRIDVGFGRIRHE--DPSVRRVVLREERMIVALPVGHVLDS 197 Query: 184 AR---SIKQLLDYSWTMPT--PHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 A+ S+ L++ + + P SY Q+ D+A P+ + LVA Sbjct: 198 AKPVLSLHDLVNDTLIIFPKAPRPSYADQVLAAFHDRALQPRRIYETRELQIALGLVAMG 257 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQR 277 + +S +P+ + L + P+ + + + R Sbjct: 258 EGVSVVPQSV--YGLKRDDISYKPLDDPNLVSPIIMSMR 294 >UniRef50_B2T7R4 Transcriptional regulator, LysR family n=5 Tax=Burkholderia RepID=B2T7R4_BURPP Length = 325 Score = 256 bits (655), Expect = 8e-67, Method: Composition-based stats. Identities = 77/305 (25%), Positives = 144/305 (47%), Gaps = 5/305 (1%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 + ++K Q+ + +G++R A+ +L M+QPA S+ ++ELE+ L LF R G+ Sbjct: 10 VRARLKTRQLLLLAAMEEEGNVRRAADVLGMTQPAASRLLKELEDMLEVSLFDRTPHGMH 69 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 T GE +HA ++L L A ++I + LAGQ+ IG+ A+ + +++P I+ ++ Sbjct: 70 ATLYGEVMIRHARMVLSNLSHAHDEISALRSGLAGQVRIGVIAAAAATMVPRAIASVKER 129 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTY--YQGPYDHEFTFEKLLEKQFAIFCRPG 178 +PQ+++ M+ L +GELD I Q + E +E L ++ + RPG Sbjct: 130 YPQLQIWAEVETSDVMLPRLAEGELDIMIGRVLERQNQFKTEVRYEPLADEPLCVVARPG 189 Query: 179 HPAIGAR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQ-TPQVGVVCETFSACISLV 235 H +++ +++ SW + P + + PQ V F A SL+ Sbjct: 190 HHLENETGLTLRGIVNASWVLHPPGSVLRHRFDLMFSQIGLNPPQNVVNTNNFLAISSLL 249 Query: 236 AKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 +SD L+ LP+E+ L +P+ + +I R+ +P + ++ R Sbjct: 250 LQSDMLAVLPDEVARQYQQYGVLKRIPIDLPCRMDTFGIITRQSHLLSPAASVVLEALRE 309 Query: 296 ECGYL 300 G + Sbjct: 310 AAGEV 314 >UniRef50_Q28M96 Transcriptional regulator, LysR family n=3 Tax=Rhodobacteraceae RepID=Q28M96_JANSC Length = 297 Score = 255 bits (654), Expect = 9e-67, Method: Composition-based stats. Identities = 67/298 (22%), Positives = 118/298 (39%), Gaps = 9/298 (3%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + + QIR FV A + R A+ L ++QPALS++IQ LE L LF R ++ V +T Sbjct: 1 MRSDLRQIRYFVATAEELHFRRAADRLGIAQPALSRAIQALEAELDVALFVRTNRSVQIT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 AG F A IL E+ R G + IG +P+++ F ++HP Sbjct: 61 TAGRVFLDGAREILTLTERMLEETRTAHDGRMGALRIGYTDFAIAGELPSLLKHFQERHP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 +V ++ G + I L +G+LD T F + + HP Sbjct: 121 RVTLKPQHGVTQTQIRLLEEGKLDLGFVT--GPIVRDGFDQRVVQSEALQAVVPDSHPFA 178 Query: 183 GARSI--KQLLDYSWTMPTPHG--SYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 G ++ L + + + +Y L + +P++ + + LV+ Sbjct: 179 GRATLSIADLAEEDFVHGSSRDWQHFYDYLLPMCRRAGFSPRIVQEAFNTAGILGLVSCG 238 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 ++ L E + G GLV +P+++ + I R+D + + Sbjct: 239 MGVTVLTERVCSAL--GPGLVAIPITDADERLVTSAIWRKD-HLSGPARHFVEDLCAR 293 >UniRef50_Q126X0 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=Q126X0_POLSJ Length = 321 Score = 255 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 70/297 (23%), Positives = 132/297 (44%), Gaps = 3/297 (1%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 ++K QI + ++R A+ ++ +QPA + +Q+LEEGL LF R S+G+ Sbjct: 17 RLRIKSRQIMLLNALDEHRNLRRAAAAIHTTQPAATALLQQLEEGLGVALFERHSRGMEP 76 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T GE ++A +L + A +++ AG + IG + L+ ++RF H Sbjct: 77 TVYGEVMIRYARGVLHDFEYAGDEMAALAAGAAGLVRIGSVMGATPVLLTQGLARFKAGH 136 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P+V+V + ++ L +G+LD + YD + E+L + ++ RPGHP Sbjct: 137 PRVRVSLQVDTSDLLMPALLRGDLDVVLGRLPDQFYDEDLEIEQLEGEPMSVVARPGHPL 196 Query: 182 --IGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQ-TPQVGVVCETFSACISLVAKS 238 + ++ L+ +W + +++ + L P V + A SL+ S Sbjct: 197 LDLAKVTLADLVAQTWILHPLGSPMRRRVEQALQHAGLAAPPDIVETSSILATTSLLEAS 256 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 D +S +P ++ + + +LPV + A +I RR +P + R Sbjct: 257 DMISVVPLDVAQHYANYGLVAILPVELPMSMAKLGIITRRKKDLSPAVKGFLHALRD 313 >UniRef50_Q13QG4 Transcriptional regulator, LysR family n=4 Tax=Burkholderia RepID=Q13QG4_BURXL Length = 302 Score = 255 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 67/295 (22%), Positives = 113/295 (38%), Gaps = 7/295 (2%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + + ++ FV +A + + A+ L+++QPALS+ I+ LEE L QL R + ++LT Sbjct: 2 NHMNLRALQCFVILAEELNFSRAAERLHIAQPALSQQIRSLEERLGTQLVDRARRPLSLT 61 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 +AG A IL L ++ G ++IG S S++P + FH+ P Sbjct: 62 EAGHYLCSEARQILGTLEQMTVVAQEIGIGRRGWLSIGFTRSSMYSVLPPALKAFHEAFP 121 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 QV++++ E + LR + I Q T LL + PGHP Sbjct: 122 QVELKLFEMLTEEQTDALRDMRIHIGIGR--QPLAVEGCTSYPLLSEPVMAALEPGHPLA 179 Query: 183 G--ARSIKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 I L D + H + + + L D TP V I+LVA Sbjct: 180 AHKKVRIADLADTPLILYPKHQNAQFKRSVLSLYRDAGITPAVAHEAYEIQTAIALVAAG 239 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 ++ + E + L ++ R D +P + + Sbjct: 240 LGVTFIGESVARHGRTDVAFRHLTGPGSSYRSTLAATFRTDDP-SPHLRAFLACL 293 >UniRef50_Q7W5S7 LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7W5S7_BORPA Length = 315 Score = 255 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 72/296 (24%), Positives = 128/296 (43%), Gaps = 10/296 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R F+ +A A+ L ++QP LS+ I++LEE + A LF+R ++GV+LTDA Sbjct: 16 MELRHLRYFLMLAETLHFGRAASRLGIAQPPLSRQIRDLEEQVGATLFYRGTRGVSLTDA 75 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +F Q A+ I+ A + R+ G+I IG S++ SL+P V+ F Q+HP + Sbjct: 76 GVAFAQRAAQIVAAADEAVFEAREAGQGRTGRIVIGFVHSLAYSLLPRVLPGFRQKHPGI 135 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI-- 182 V + E + + L G++D I Y E + E+ F + GHP Sbjct: 136 AVSLREVTVADKESALLSGQIDTGI--YRPTVRHPEIATLPIFEEGFVLALPSGHPLARK 193 Query: 183 GARSIKQLLDYSWTMPTP---HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 S+ L D + + ++ L + T + LV Sbjct: 194 RRVSVHSLRDQPLILFRALRGDVGLHGTIAAFLRAHDVPVKACEEVGTIHVGMGLVLAGV 253 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 + +PE +H +G+V P +E + + + R + + + R Sbjct: 254 GVCIIPET--SRMVHIEGVVTRPFAEATTRVSSTVCWRHQDS-SRSLDAWVRHVRE 306 >UniRef50_A1TN88 Transcriptional regulator, LysR family n=9 Tax=Burkholderiales RepID=A1TN88_ACIAC Length = 307 Score = 255 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 72/293 (24%), Positives = 126/293 (43%), Gaps = 9/293 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R F +A + A+ LNMSQP LS +I++LEE + AQLF R K V LT A Sbjct: 1 MELRHLRYFAVLADELHFGRAAARLNMSQPPLSVAIRQLEERVGAQLFERTPKEVRLTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + A +L + A + R LAG++ IG ++ +P + F Q+HP V Sbjct: 61 GRALKASARRVLAQAEEALSEARGVAAGLAGRLRIGFVGAMLYRGLPQALGVFQQRHPGV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V + E I EL LD + P L+ + F GH Sbjct: 121 RVSLQELNSGEQIGELLHDRLDLGFVHTSRMPAT--LQQRLLVTEPFLCCLPAGHRLARR 178 Query: 185 R--SIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + ++ L + + Y+ ++ + P++G + A +SLV++ Sbjct: 179 KVIDLRDLAGEPFVLFARAVSPDYHARILSICASAGFQPEIGHEVRHWLAVVSLVSQGLG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 ++ +P+ M + G V PV + ++ Y + + + PL L+ Sbjct: 239 VALVPQAM--EHSRLPGAVFRPVGPAVAQSEAYAVWPA-APENPLVGDLMAIL 288 >UniRef50_B4SSK9 Transcriptional regulator, LysR family n=3 Tax=Stenotrophomonas RepID=B4SSK9_STRM5 Length = 302 Score = 255 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 73/306 (23%), Positives = 130/306 (42%), Gaps = 14/306 (4%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 +++ +R F+ VA A+ L MSQP LS+ I++LE+ + A+LF R + V LT Sbjct: 1 MSIELRHLRYFLAVADTLHFGQAAERLGMSQPPLSQQIRQLEDLIGARLFVRSHRRVQLT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMG-ASISRSLMPAVISRFHQQH 121 AGE + A I+ ++ +A +++++ Q G++ IG+ A+ +P I ++ Q++ Sbjct: 61 AAGELLQERARAIVLQVESAVDEVQRAQRGEQGELRIGLTRATPLSPQIPRSILQYRQRY 120 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 PQV++++ E + I+ L G LD I P E L A+ HPA Sbjct: 121 PQVRLQLSEMNTLQQIDALLDGSLDVGIIRKRALP--PELVAHSLFVDPLALIVHADHPA 178 Query: 182 IGA------RSIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACIS 233 + S++ + + + L TP++ S IS Sbjct: 179 LRRLSKQGTLSLRDFAQEPFVAFRRSAGAGIHDHMIALCAAAGFTPRIVQEAGEASTLIS 238 Query: 234 LVAKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 L A + LP CD + +G + +++ + L R+ TPL + Sbjct: 239 LAAAGLGAAILPSS--CDHIRVEGARFVALADAGAHSEVQLAWHREG-VTPLIRNFAGLL 295 Query: 294 RRECGY 299 R Sbjct: 296 REAFAE 301 >UniRef50_C3KMF5 Transcriptional regulator, LysR family n=42 Tax=Bacteria RepID=C3KMF5_RHISN Length = 308 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 81/299 (27%), Positives = 137/299 (45%), Gaps = 3/299 (1%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++K ++ FVEVARQ S+ A+ +LN++QPA++K+I+ELEE L +F R +G+ +T Sbjct: 5 RIKFRHLQTFVEVARQKSVVKAADLLNVTQPAVTKTIRELEEVLGVSVFERDGRGIKITR 64 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 GE F +HA L LR + + Q + I IG ++S +MP ++ F ++ Sbjct: 65 YGEVFLRHAGAALTALRQGLDSVSQERSGDGPPIRIGALPTVSTRIMPRAMALFLEEKTG 124 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI- 182 +++I+ G+ ++ +LR G+LD + F+FE L +Q R GHP + Sbjct: 125 ARIKIVTGENAVLLEQLRVGDLDLVVGRLAAPDRMTGFSFEHLYSEQVVFAVRAGHPLLS 184 Query: 183 GARSI-KQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAKSDF 240 G +S+ L DY MPT + L + + S + V SD Sbjct: 185 GKQSVFAHLGDYPVLMPTRASIIRPFVERYLIANGIAGLPNQIETVSDSFGRAFVRSSDA 244 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 + + + + L LP+ K L R D+ + + L+ R G Sbjct: 245 IWIISNGVVATDIEDGLLAALPIDTSETKGPVGLTMRTDAIPSLPLSILMQTIREAAGA 303 >UniRef50_Q2RHG4 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RHG4_MOOTA Length = 302 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 63/293 (21%), Positives = 131/293 (44%), Gaps = 7/293 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I+ + F+ +G++ A+ L+++QPA+SK +Q LE+ +L RR + V LT A Sbjct: 1 MNINHLITFITTVEKGTLSAAAEELHLTQPAVSKQLQALEDYFGLRLLERRGREVRLTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE Y+HA +I L + ++ + + G++ +G + + ++P +I F +++P+V Sbjct: 61 GEICYRHARIIASHLNQTRRELAELTQLVRGRLLLGASTTPGQYILPRLIGAFRREYPRV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V + ++ L++GE+D G ++ +L + + PGH GA Sbjct: 121 EVILTIADTQEVVQRLQEGEIDLG-VVGAAGGRGKNLSYSRLAGDELVLIVPPGHRLAGA 179 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTP---QVGVVCETFSACISLVAKSD 239 +I +L + + + E L T Q+ + + A +S V Sbjct: 180 TAISPGELKEEPLVWRESGSGTRRVVEERLAAAGFTVDPEQIVMELGSTEAIVSAVEAGL 239 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQ 292 +S + + L ++ + + K YL++RR +P + + Sbjct: 240 GISLVTSWAVEKSVKLGRLAVVTLQGVDLKRDLYLVRRRQ-PLSPAAEAFVNF 291 >UniRef50_B5JV63 LysR protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JV63_9GAMM Length = 307 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 54/295 (18%), Positives = 112/295 (37%), Gaps = 5/295 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I ++ + +A A+ ++SQP LS I++LE L L R +K V LT+ Sbjct: 1 MNIRDLQYLMALAEHQHFGRAADACHVSQPTLSTQIKKLEGELNVTLVERDNKKVMLTEV 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + + + IL + ++ Q +G++ +G+ +I L+P + ++ P + Sbjct: 61 GNAVVERTADILRGVDEIRDIALQASDPESGRLALGLIPTIGPYLLPYAMRAIKKRFPDL 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + E Q +++ L+ G++D I D + + F HP Sbjct: 121 RIYLYEAQTADLVDMLKSGKIDAAIMAL--PVDDDRIDNIPIYNEAFLAALPFNHPLADR 178 Query: 185 RSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + +L D + Q E+ + + G + +VA ++ Sbjct: 179 SLLNPSELKDSEMMLLEDGHCLRDQALEVCQNMGASEMSGFRATSLETLRQMVASGAGVT 238 Query: 243 KLPEEMGCD-PLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 +P + G + ++P E P+ + R S + L L Sbjct: 239 LMPTLAAETNQIEGSDVAIVPFEEPQPQRQVGIFFRPSSPRKALFKELGQAIAER 293 >UniRef50_B5WW96 Transcriptional regulator, LysR family n=2 Tax=Burkholderia RepID=B5WW96_9BURK Length = 334 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 62/298 (20%), Positives = 123/298 (41%), Gaps = 5/298 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + + Q++ F+ +R S A+ L+++QPA+S I +LEE + +LF R ++ +TLT Sbjct: 17 RTLTLRQLQIFIVASRYTSFARAAEELHLTQPAVSMQIHQLEEAVGLRLFERVARKLTLT 76 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 +AGE HAS IL E++ ++ + + +G I +G+ +S + P +++ + +P Sbjct: 77 EAGEVLTHHASRILGEIKDTEDAMMSLKSADSGSITVGIVSS-ATYFAPKLLAMYSHLYP 135 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 +V V G +++ L+ +D I D T E L + HP Sbjct: 136 RVDVNFSVGNRDALLRLLQDNAIDLAIMGRPPPELDT--TAEPLASHPQVVIAPLSHPLC 193 Query: 183 GARS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 GAR +++L + + + P + TP V + V Sbjct: 194 GARRFDLQELCNDIFLLREPGSGTRMAAEAMFRQHLFTPAKTVTLGSNETIKQAVMAGMG 253 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 +S + L + +L V+ + + ++ R + +P + Sbjct: 254 VSLISLHTLQLELRTGEIALLDVNGTPIERTWQIVHLRSKQLSPTSVMFRQFLLEHAA 311 >UniRef50_Q1QYT3 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QYT3_CHRSD Length = 317 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 78/298 (26%), Positives = 138/298 (46%), Gaps = 3/298 (1%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M ++K+ ++ F+ + ++ A+ L MSQPA SK + ELE L LF R +G+T Sbjct: 10 MRVRLKLRHLQLFIALDDLRNLHRAAERLGMSQPAASKLLGELEGQLGLALFERHPRGIT 69 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 GE+ +HA IL L A +++ Q AG +++G + + +L+ + + R H+ Sbjct: 70 PNWYGETVIRHARGILSSLHQAGDELNALQAGSAGSVSVGTVMAPAVTLLTSAVERVHRD 129 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 P +KV I +I L +GE DF I +F FE++ E+ CR GHP Sbjct: 130 RPNLKVSIDVDVSHELIPRLVEGEFDFAIARIPSTLPAGDFVFEEIGEEALCFVCRAGHP 189 Query: 181 AIGARS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAK 237 S ++ +++Y W + P +++ L P+ + +++V K Sbjct: 190 LADRTSLNLEAMVEYPWVLQPPGALMRQRVDHLFLHHGVALPRQIIDTPDILVALAMVDK 249 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 SD ++ ++ +LP E L Y L+ R+ R +P A+L++ R Sbjct: 250 SDTVTVTTRQVAELLCDQPRFRILPFPEALSVQPYGLVSLREQRLSPGAAALMSALRD 307 >UniRef50_Q2T940 Transcriptional regulator, LysR family n=6 Tax=Burkholderia RepID=Q2T940_BURTA Length = 395 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 65/298 (21%), Positives = 118/298 (39%), Gaps = 8/298 (2%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M + I + V + A+ L++SQ ALS+ I++LE+ L AQLF R + V Sbjct: 84 MQRNPLLRNICYLLAVDEHRNFTRAAEALSISQSALSQKIRQLEDELGAQLFDRSGRVVQ 143 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LTD G + ++A +L AQ + GQ+ IG + + L+ VI FH++ Sbjct: 144 LTDFGGVYLEYARRAHSDLLTAQRALNDVHDLSRGQLRIGFTPTFTEYLIAPVIEHFHER 203 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 +P + + + E L ++ L ++D E E L ++ + HP Sbjct: 204 YPGIVIEMTEMSLDAVETALGDDQVDLAFGFV--DVRSDEIEAEALFPERLMLVAGATHP 261 Query: 181 AIGAR---SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAK 237 R + QL + + T + P V + + SA + +V + Sbjct: 262 LTTQRDPITPDQLAETPLALLTTSFVSRFYIDSYFQSYDMKPNVALQANSISAVLKIVRR 321 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 + LP + + L +P+ P L++R+ + +T + R Sbjct: 322 GKIATILPGTI---EFEHRDLQYVPLDPPFPVRTVALLRRKGAYRTVAATAFAASVRA 376 >UniRef50_B9X9V4 Transcriptional regulator, LysR family n=1 Tax=bacterium Ellin514 RepID=B9X9V4_9BACT Length = 296 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 66/290 (22%), Positives = 126/290 (43%), Gaps = 7/290 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ QI F+ VA + A++ L++SQP LSK I++LE+ L QLF R + V T+A Sbjct: 1 MQFRQIECFLAVAEELHFSRAAKRLHLSQPPLSKHIRQLEQELGVQLFIRNRRSVVQTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + + +L +L A+ ++ Q G++ IG +++ +P ++ RF ++ P V Sbjct: 61 GRIYQEKVRNVLYQLEEAKLAAQRAQAGQTGELKIGFLSALFYDFIPPLLMRFRRRFPDV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V ++E + G++D E + L + ++ HP Sbjct: 121 QVTLLEMVAAKQFEAVSDGKVDVAFPGLPPDKPGLEISSRILRKDKWYACFHSEHPLAQQ 180 Query: 185 RS--IKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 ++++ S+ + L E+ TP+V + +SL+A Sbjct: 181 EKVWLEEVRRESFVFIQRAVSPALDDALLEMFRQVNYTPRVAQTASRAQSLLSLIAAGVG 240 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLI 290 +S P + L GLV P+ + L + +I S +P+ A + Sbjct: 241 ISIFPGAVSA--LPSAGLVFRPLKDKLAPYEHSIIW-NGSNTSPVLAEFL 287 >UniRef50_A1W235 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=A1W235_ACISJ Length = 309 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 62/299 (20%), Positives = 116/299 (38%), Gaps = 8/299 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + Q+ FV +A G+ A+ L+M+QP LS SI++LEE L + LF R + GV LT A Sbjct: 1 MNLRQLSQFVALAETGNFHRAAERLHMAQPPLSVSIRKLEEELGSPLFERTTTGVVLTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+ A L + ++ ++ + G + +G+ S + +L+P +I Q++PQ+ Sbjct: 61 GEAMLGDARRALFHAQQCRQAVQDAREGEGGLLRLGIIGSATYALLPQLIPSLRQRYPQI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + E ++ L D + Y F L F + P Sbjct: 121 ELELSEATSSEILEGLVSRRFDAGLLR-YPVLDPSGFELLPLDRDDFVLAVAESSPLAQR 179 Query: 185 R--SIKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 ++ + + M H S +P+V +SLVA Sbjct: 180 DAIALAEAAHEPFIMYPQHKVPSLSALAMMRCQFSGFSPRVAQEAMQVQTIMSLVASGLG 239 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQ-RRDSRQTPLTASLITQFRRECG 298 + + + +G+ L +++ P + R S + + R Sbjct: 240 VGLV--ASVARQVVPRGVKCLALTDNPPGFHVGIALARLASGTSRVVERFTEHALRFAS 296 >UniRef50_Q8XFS3 Probable transcription regulator protein n=1 Tax=Ralstonia solanacearum RepID=Q8XFS3_RALSO Length = 306 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 69/295 (23%), Positives = 127/295 (43%), Gaps = 10/295 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + ++R FV +A A+ L+++QP LS I+ LEE L A+LF R ++ V LT A Sbjct: 1 MDLRRLRYFVVLAETLHFGRAALRLSIAQPPLSHQIRVLEEELGARLFDRNNRRVELTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRS-LMPAVISRFHQQHPQ 123 G + A +L + A + + G++ IG ++ + + ++P +I + + P Sbjct: 61 GMALLPEARALLAQAEKASTIAARVERGELGELRIGFTSAAALTQVIPRLILAYRRDWPG 120 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINT-YYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 V++ I E + + + LDF F +L E F + P HP Sbjct: 121 VRLSIRELTTQEQLTAMLERRLDFAFVRGTAAPDLPPAFGAVRLFEDAFVVALPPQHPCA 180 Query: 183 ---GARSIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAK 237 G+ +K L + + M P Y+Q+ L PQV + + + LVA Sbjct: 181 DNDGSLFVKALANEPFVMYPPESGTGAYEQVLSLCRHAGFAPQVVQEALSAATMVGLVAA 240 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQ 292 ++ +PE + G+ + + K+A +L+ R D + A+ + Sbjct: 241 GLGVALVPESF--QRIEASGVAFRALRDSQAKSAMWLVFRAD-EVSVREAAFLEL 292 >UniRef50_B9J8D6 Transcriptional regulator protein n=69 Tax=Proteobacteria RepID=B9J8D6_AGRRK Length = 298 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 68/301 (22%), Positives = 126/301 (41%), Gaps = 9/301 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ IR F+ VA + + A+R + + QP LS I++LEE + A LF R G LT+A Sbjct: 1 MELRHIRYFLAVAEELNFTRAARRIGIGQPPLSNQIRDLEEEIGAPLFRRLPHGAELTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRS-LMPAVISRFHQQHPQ 123 G+ F + A IL A+ + G++ +G S + S ++P+ + F + +P+ Sbjct: 61 GQVFLREARAILTRAGQAKALALRAARGELGRLRVGFTGSAAFSPIVPSSVRSFRRTYPE 120 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 + + + E ++ L ELD F L E+ I HP Sbjct: 121 IDLTLEEAHTTRLLERLDAEELDAVFIR-PGRTGPPGFRSHVLGEESMVIALPSSHPLAE 179 Query: 184 ARS--IKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 A + + L D + + S + ++ P +G + ++ +L+A Sbjct: 180 ADTLPLSTLSDEPFVLFPRAAGPSLFDEIIAACRRAGFEPILGQIAPQITSIANLIAVEL 239 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 +S +P + + G+ +P+S P A L RRD + + + I + Sbjct: 240 GVSVVPLAVA--EIQVPGVSYIPISGDGPVARLALATRRD-ECSAVVRNFIARVLATKAE 296 Query: 300 L 300 L Sbjct: 297 L 297 >UniRef50_Q1AUB8 Transcriptional regulator, LysR family n=2 Tax=Bacteria RepID=Q1AUB8_RUBXD Length = 320 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 120/291 (41%), Gaps = 6/291 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + Q+ F+ VAR G++ A+ + ++QP L+ ++ LEE L QLF R S+G+ LT+A Sbjct: 1 MLYRQLECFLAVARTGNLSRAAEEMYLTQPTLTARLKALEEELGDQLFVRTSRGMRLTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G F +A ++ + + + +G G++ +G + +P ++ RF +P+V Sbjct: 61 GREFLPYAERVVSSFEEGKRRLEELRGASGGKLVVGASPGVGTYALPGLLERFVGAYPKV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 V + G ++ + + E+ + E L E + + P H Sbjct: 121 NVSVRTGHSEDILEMVLREEVHLGLTR---EMRHPEVESVPLYEDELVLVVAPEHRFTQR 177 Query: 185 RS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 S + ++ + + SYY+Q L + + A +V ++ Sbjct: 178 GSAGLAEIGEEQLILFDNDSSYYEQTQALFTSAGIRELRTLEVDNIEAAKRMVEHRLGIA 237 Query: 243 KLPEEMGCDPLHGQGLVMLPVSE-ILPKAAYYLIQRRDSRQTPLTASLITQ 292 LP + LV++ V + + ++RRD+ + + + Sbjct: 238 FLPRSAIVRAVSAGNLVLIRVEDGPEMTRSIVALRRRDAPASGPVRAFLEL 288 >UniRef50_C1DL37 LysR family transcriptional regulator protein n=2 Tax=Proteobacteria RepID=C1DL37_AZOVD Length = 312 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 68/306 (22%), Positives = 114/306 (37%), Gaps = 11/306 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R FV VA + A+ LNM QP LS+ I+ LEE L LF R KGV LT Sbjct: 1 MELRHLRYFVMVAEEKHFTRAAARLNMQQPPLSQQIRALEEELGFALFLRHPKGVELTAG 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRS-LMPAVISRFHQQHPQ 123 GE+F + A IL + + + G + +G +S + L+P +I + + P Sbjct: 61 GEAFLREAQDILARVAQGASKAARVAQGIEGMLALGFTSSATSHPLIPRIIREYRARFPG 120 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI- 182 V++ + E + + G +D + F +LL + + HP Sbjct: 121 VEIALSEDNAQRLTESVTAGGIDLGVLRAPV-ANPAGIEFHRLLVEDMLLTLPVDHPLAT 179 Query: 183 -----GARSIKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLV 235 + L + + Y L + P + E +SLV Sbjct: 180 DAARREGVPLAALARERFILVRRPGAPGMYANLIAACRNAGFEPAIAFEVERMLTNVSLV 239 Query: 236 AKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 A +S +P M L ++ A L+ R Q+P + I R+ Sbjct: 240 AAGAGISVVPASMKDLHRDNVAYCRLRGAKPRLVAPVTLVCR-GFNQSPPLRNFIALARQ 298 Query: 296 ECGYLQ 301 + Sbjct: 299 LSAEYR 304 >UniRef50_Q127N6 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q127N6_POLSJ Length = 328 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 126/294 (42%), Gaps = 7/294 (2%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 V + Q+RAFV VA+ S A+ L+++Q ALS I+ELE L Q+ +R ++ V L+ Sbjct: 1 MNVTLRQLRAFVAVAKSASFTEAAATLHITQSALSGLIKELEHVLGVQVVYRSTRKVQLS 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 + G F A+ IL++L A I + +G + + ++ +LMP I+ F+ ++P Sbjct: 61 EVGGEFLPLATRILQDLDEAYHAIHDLKALKSGVVRVAAPQLMACTLMPDAIAAFNSKYP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA- 181 V++R+ + + ++ +++ GE+DF I + E L E F P HP Sbjct: 121 AVQIRLSDCAVEAVQSKVHSGEVDFAIG--PEREVSPEIATHSLFEIPFVAVFPPDHPLG 178 Query: 182 -IGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + + + Y + T G+ + +S+V+ Sbjct: 179 KLKRVTWTDISRYPLISLQGEYTQRLSADLQAASGNLTLSPGMEVTFMTTALSMVSAGLG 238 Query: 241 L-SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 + + LP L+ GL + + +YL+ ++D +P Sbjct: 239 VTTCLP--YATSLLNLYGLQTRLLQAPTLRRKFYLLTKKDRPLSPAAQGFSDFL 290 >UniRef50_C6IVL6 Transcriptional regulator YwqM n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVL6_9BACL Length = 302 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 67/295 (22%), Positives = 116/295 (39%), Gaps = 4/295 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ + F+ V GS A++ L+ +Q +++ IQ LE + LF R + + LTDA Sbjct: 1 MESRHLFTFLVVVEAGSFTRAAQQLDYAQSSVTAQIQALEAEIGLPLFDRIGRKIVLTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +A I + A+ + +AG + IG S++ +P VI + Q++P V Sbjct: 61 GRRLLPYAQEIAKIHEMAKNALHPAAE-MAGSLKIGAPESLAAFRLPEVIRHYRQRYPLV 119 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + GQ + + +R GELD D + E L+ + A+ HP Sbjct: 120 QIVLKPGQCWELRDLVRSGELDVAFL-LQPEVEDRDLQIETLVHEPMALVAPADHPLRHE 178 Query: 185 RSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + QL D + SY L+ P + + A V +S Sbjct: 179 AEVVPDQLKDQTILHTESGCSYRTLFERYLNSHGVFPDPNLEFWSIEAIKQCVMSGLGVS 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 LP L LV L ++ + A L R ++P + R + Sbjct: 239 FLPLVTVRSELAEGKLVKLNWNDESQRVATQLALHRKKWRSPALEQFVLMIREQA 293 >UniRef50_D1RNC3 Transcriptional regulatory protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RNC3_SEROD Length = 310 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 54/301 (17%), Positives = 109/301 (36%), Gaps = 8/301 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+R F+ VA + S A+ L+M+QP L+ +I+++E+ L L R ++ +T+A Sbjct: 2 IELRQLRQFIAVAEEMSFHRAAERLHMAQPPLTAAIRKIEQELGVPLLERGNRITRITEA 61 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F A L + + R+ L + + S +L+P ++ +F +HP Sbjct: 62 GQVFLIEARRTLAQFERTLGNTRRAARGLTESLRLTFVDSTVNALLPGILRQFRLEHPLA 121 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + + E + LR D + P + L + + HP Sbjct: 122 EFHLQEATTAEQLIALRDDRADIGMVVLPVAPQ-EGLQIQPFLFDRMVLALPDHHPLAAQ 180 Query: 185 R--SIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 R +++ L D W + + + + +P++ LVA Sbjct: 181 RQVTLRDLDDEPWLLFPAHYGPGMHAAILQACAVAGFSPRIVQEARQMQTIGGLVAGGVG 240 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 ++ +P G L L +PLT + + Sbjct: 241 IALMPALFAVLKSPGVVFRELSGVGSPVPYTLALAW---QTPSPLTDAFCRIAAEQAAAY 297 Query: 301 Q 301 + Sbjct: 298 R 298 >UniRef50_A7IMC0 Transcriptional regulator, LysR family n=18 Tax=Proteobacteria RepID=A7IMC0_XANP2 Length = 320 Score = 253 bits (648), Expect = 6e-66, Method: Composition-based stats. Identities = 62/300 (20%), Positives = 127/300 (42%), Gaps = 6/300 (2%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 ++ +R+FVEV RQG A++ + SQ A+SK++++LE + L R L Sbjct: 24 GLAMEFRPLRSFVEVVRQGGFSQAAKAVLTSQSAVSKAVKQLEAEVGVPLLDRMGHRSVL 83 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T AGE Y+ A +L + ++ + +G G + +G+ + S +++ + Q+ Sbjct: 84 TPAGEVVYRRAVKLLADRADLLAELDEIRGLRRGVLRLGLLPACSSVPFTPLLALYRQRF 143 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P+++VR++E + ++LR G++D + P EF FE L + GHP Sbjct: 144 PEIEVRLVERDSAQLEDDLRTGDIDIAGSLL---PISPEFDFEPLCREPLVAVLPSGHPL 200 Query: 182 I--GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 + L D + M + ++ + + P + + L A Sbjct: 201 ATQAEIRLADLRDTPFIMLESGLALHRIVLDASRRAGFLPAIAARSSQIDFTMELAAAGL 260 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 ++ LP + H + + ++E + + + RR + + ++ + R G Sbjct: 261 GVAFLPRMIAAQR-HDAAVCQVRLAEPDLEWSMAMAWRRGAYLSDAASAWLALVRERHGE 319 >UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67NJ1_SYMTH Length = 311 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 63/296 (21%), Positives = 123/296 (41%), Gaps = 5/296 (1%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 + + + F V +GS A+++LN++QP+++K + LE+ L QLF R+ K V LT Sbjct: 10 SMLLQHLTTFCRVVEEGSFTRAAQVLNLTQPSVTKQVGALEDYLQVQLFTRQGKRVHLTP 69 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 GE Y +A ++ ++ +E +R+ + +G + +G +I +P +++ + ++HP+ Sbjct: 70 VGELVYDYARQVIHLVQRCEEAVREYRSPGSGSVTVGCVHTIGLFTLPELLAAYVREHPR 129 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP--A 181 VK+ + G + L GE+D + T L E + P Sbjct: 130 VKINVKTGNNRETVTMLLHGEVDVGLVTT--PQVHERIEVVPLFEDPLVVVAGPSFAADL 187 Query: 182 IGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 S L + + ++L++ PQ + + A ++VA + Sbjct: 188 PPVVSNADLAQLPFIGYVRGARFRMTTDQVLEEMGIQPQFVMEFDNHEAIKTMVALGFGI 247 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSE-ILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 + P L LV L V LI RR R++ + ++ + Sbjct: 248 ALEPVSAVQRELISGQLVRLNVPGLPRLSRTTSLILRRGERRSEAVRAFLSLLEQR 303 >UniRef50_C4ZIH4 Transcriptional regulator, LysR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZIH4_THASP Length = 318 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 84/300 (28%), Positives = 138/300 (46%), Gaps = 3/300 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +KI+Q+R F+ VA +GS+R A+ L +S A+S++++ELE + LF R S G L+ A Sbjct: 1 MKINQLRYFLAVADKGSVRAAATALGVSAAAVSQALRELETAMGTPLFTRESHGAVLSYA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G F HA LIL ++ A+ +I Q +G G + IG+ +++S++P ++RFH P V Sbjct: 61 GRQFLIHARLILGQVSRAEAEIAQIRGATGGSLTIGVTPWVAQSILPHALARFHALRPDV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + + E ++ LR G LD I F +L A+ R GHP A Sbjct: 121 HLDVTEAV-GTVHPLLRDGTLDLVIAIPPPRQEASIFYTRELFRCDLAVVGRLGHPFASA 179 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQ--TPQVGVVCETFSACISLVAKSDFLS 242 S+++L+D W + + L LL P + IS++ + L+ Sbjct: 180 TSLEELVDQDWVLTMLGAGQDEPLVNLLAPHGIAPPPHRVHYARSALVAISMLEVGNMLT 239 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQS 302 P + PL + LP+ LP+ +I RR+ + I F + Sbjct: 240 ICPWPLLETPLLRGRVQALPIRNPLPEMHTAIIVRRNDTLSAAGQLFIDCFEDATRTCVA 299 >UniRef50_C7MTU9 Transcriptional regulator, LysR family n=3 Tax=Actinomycetales RepID=C7MTU9_SACVD Length = 319 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 68/297 (22%), Positives = 123/297 (41%), Gaps = 7/297 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+ FV VA + + A+ +++SQ +S I++LE L A LF R ++ VTLT A Sbjct: 1 MELRQLEYFVAVAEERNFTRAAERVHVSQSGISAQIRQLERELGATLFDRSTRTVTLTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + HA L A + + G L G++ +GM + + + ++ FH+ HP V Sbjct: 61 GRAALDHARAALAAAAAVDQAVSDVTGLLRGRLTVGMVIGCTLTPLFDALAAFHRAHPGV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + E +++ +R G LD + G H+ ++ + PGHP Sbjct: 121 ELSLWEDNSDRLVDGVRAGTLDLALVG-AAGAPPHDLNALTIISEPLVAVVPPGHPLATQ 179 Query: 185 R--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 S+ L+D+ P E + P + A L + ++ Sbjct: 180 PQVSLGDLVDHPLACMPPGTGLRAVFDEACTVRGIEPTITWEASAADALAELTFRELAVA 239 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 L E M L LP+ ++ A L+ + + P +LI + G Sbjct: 240 VLSESMATHY--RDRLTALPLDDVDIPALLALVWKPST--NPALHALIEHCEQAFGE 292 >UniRef50_Q7NKC0 Nitrogen assimilation transcriptional activator n=1 Tax=Gloeobacter violaceus RepID=Q7NKC0_GLOVI Length = 326 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 69/294 (23%), Positives = 117/294 (39%), Gaps = 6/294 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + Q++ F+ + GS R A+ +SQP LSK I LE L LF R + +LT Sbjct: 12 LDSRQLQYFLALNHCGSFRLAAEQCGVSQPGLSKQIMALEGELGGPLFDRTGRRASLTPL 71 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE F +A +EL ++ I + G+I I S++ L+PA+++ F Q+HP Sbjct: 72 GECFLPYARRAYKELEQSRAAIGELLKPDRGEICIAGLHSVNAYLLPALLAVFRQKHPGT 131 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++R+ +I L +D I + E L E++ + HP Sbjct: 132 QLRLTSLGSERIIKVLLDRLVDAAI--LMGPVHSPELVSTPLYEEELVVLLPAHHPLARR 189 Query: 185 RS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 S + ++ + + L + T V V T A +V + ++ Sbjct: 190 PSVRLAEVAILPQVVFRDGYAMRTALVQHFRAIGATVDVAVELNTLEAFKEMVRQEVGVA 249 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 LP G LV+ + E L+ R+D+ Q P+ A+ Sbjct: 250 ILPLCAVQHL--GTDLVIARLEEPSITRRVELVCRKDNYQVPVVAAFTRLVAEH 301 >UniRef50_Q2RZH0 Transcriptional regulator, LysR family n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZH0_SALRD Length = 300 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 67/296 (22%), Positives = 115/296 (38%), Gaps = 9/296 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R F +A + A+ + ++Q LS+ I+ EE + LF R S GV LT+A Sbjct: 1 MELRHLRYFTALADELHFGRAADAVFVAQSTLSQQIKAFEEEIGVALFDRASGGVELTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +F +A +L E R A+ R + LAG + I AS RS +PA+I F + P Sbjct: 61 GHTFLPYAKRVLREARRAESVARAARDGLAGLLTITYAASAMRSGLPAIIKTFRSKRPHG 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ ++E ++ LR E D + + L + GH Sbjct: 121 ELDLVEQTTREQVDALRGKETDVGFLFL--PINERGLRVQPLFTAPMVVVLPTGHRLADR 178 Query: 185 RS--IKQLLDYSWTMPTPHGSYY--KQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 S +++L + G+ + TPQ+ E + + LV Sbjct: 179 TSVPLRELEGEPHVIWARSGAPRIHDAYVRACHEAGFTPQIPQEIERGESFLGLVEAGLG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 +S + G+ + E L RRD+ +PL + E Sbjct: 239 VSI--AHASNVQIQRPGVGYAKIVEPTVPLTLGLAYRRDND-SPLLDRFLETVADE 291 >UniRef50_A0AXF9 Transcriptional regulator, LysR family n=9 Tax=Burkholderia cepacia complex RepID=A0AXF9_BURCH Length = 329 Score = 252 bits (646), Expect = 8e-66, Method: Composition-based stats. Identities = 81/301 (26%), Positives = 145/301 (48%), Gaps = 3/301 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K+ Q+ AF+ VA +IRGA+R L ++QPA+S ++ELE L L R KG+ LTD Sbjct: 25 MKLKQLDAFLAVAEHRTIRGAARALGVTQPAVSGIVRELEHELGVPLVVRSVKGIALTDY 84 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +F A LI+EE++ +++I Q + G ++I + +++ +++P + F + P Sbjct: 85 GSAFAIRARLIVEEIQRTRDEIEQLRLGTTGSVSIAVSPTVALTILPRAFAAFTRDLPGA 144 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTY--YQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 + + + + + LR G LDF + P EF L FA+ R H Sbjct: 145 TLNVDDALTATDLARLRDGSLDFIVTHQLSNALPDPDEFASIPLFRTAFAVVARSRHRLA 204 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQ-TPQVGVVCETFSACISLVAKSDFL 241 ARS+++L+D W +P + + P+ V C +F+A + LV+++D L Sbjct: 205 RARSLRELVDAHWCVPRYGEGGDDLIRSIFMPFGLDVPKRVVHCPSFAATLGLVSQTDAL 264 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQ 301 + +G+V L ++E +P ++ RR + TP I + + Sbjct: 265 GVFARPLAEVERQSRGIVALNLAEPMPALTVAIVMRRHALLTPAALHFIECLKGASATVS 324 Query: 302 S 302 + Sbjct: 325 A 325 >UniRef50_A3ZYQ6 Transcriptional regulator, LysR family protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZYQ6_9PLAN Length = 293 Score = 252 bits (646), Expect = 8e-66, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 121/291 (41%), Gaps = 4/291 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + +H + F EVA GS+ + L +SQPA SK +++ E L +LF R +G+ LT Sbjct: 1 MNLHHLAIFHEVAETGSVSLGAEQLMISQPAASKQLRDFETALGEKLFDRTGRGLRLTTV 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ ++A I A+ + + G++ +G +I+ L+P V++RFHQQHP++ Sbjct: 61 GKLLNEYARKIFTLEAEAERVVALVRDVRRGELFLGASTTIAGYLLPQVLARFHQQHPEI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V + G + ++ +D + + + T E + + HP + Sbjct: 121 RVHVSVGNTDFVHRQVLDYRVDLGLTEGF--VNEPGLTATSFAEDELVVVAAATHPLVKK 178 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 R +K L S+ + + + + + + A +VA L+ Sbjct: 179 RRVKADDLSGQSFVLRESGSGTRAVQEQAISMCGVEVREVMTLSSTEAIKHVVAAGVGLA 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 + L L + ++++ +L+Q +D +P + Sbjct: 239 IVSRLSVGAELVSGELCAIRLADLQIPRPLHLVQAQDRFASPAARAFHEAL 289 >UniRef50_Q1DBN8 Transcriptional regulator, LysR family n=2 Tax=Cystobacterineae RepID=Q1DBN8_MYXXD Length = 301 Score = 252 bits (646), Expect = 9e-66, Method: Composition-based stats. Identities = 62/298 (20%), Positives = 120/298 (40%), Gaps = 9/298 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++ Q++ FV VA + A+ + M+QP S+ I+ LE L +L R S+ V LT A Sbjct: 1 MEFRQLQLFVAVAEELHFGRAAARIGMAQPPFSQQIRRLESELGVELLTRTSRRVALTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + A +L ++Q G + +G AS + ++P ++ RF + P+V Sbjct: 61 GSRLLEDARALLARRADVIHSVQQAASGETGTLRVGFAASSAFGVLPDIVLRFRTRFPKV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 K+ + + + + + L GELD I T E+LL+++F + HP Sbjct: 121 KLELDDSETLDVGAALVSGELDIAIIR--APFRHEGLTVERLLQERFVLALPARHPRARQ 178 Query: 185 --RSIKQLLDYSWTMPTPHG--SYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 ++ L + + + H + ++ + +P + ++ + + +V Sbjct: 179 QVVALSSLANEPFVLFPRHSAPGLHDLVTSMCLGAGFSPNILQEASSWPSVVGMVEAGLG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 L+ P L +G+V P+S A + +R P Sbjct: 239 LTIAPAS--SQALCPKGVVFRPLSGAPGHAELVVAFP-GTRPAPAAQHFRVLAHEAVS 293 >UniRef50_C7JCS7 Transcriptional regulator LysR n=11 Tax=Proteobacteria RepID=C7JCS7_ACEP3 Length = 313 Score = 252 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 70/298 (23%), Positives = 117/298 (39%), Gaps = 9/298 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I +R FV VA GSI A+ L + QP LS+ I++LE L LF R+++G+ LT+ Sbjct: 1 MDIRHLRYFVTVAEHGSITHAAEALGIEQPPLSQQIRQLERNLGVTLFERQTRGMKLTEI 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASI-SRSLMPAVISRFHQQHPQ 123 GE A IL+ G I +G+ ++ ++P I RF + P Sbjct: 61 GEVLLPRARTILDLQAQFLSTAEGLARGERGHIRVGLAGAVPLLPVIPLTIRRFREMAPD 120 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V + + E ++ L + +D I + LL++ I GH Sbjct: 121 VTLSLEESNTPALCAALHEPSVDIAIIR-PPFTDPSRLSVFHLLDEPTVIALPRGHRLAK 179 Query: 184 AR--SIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 S+ + D + ++ + TP +G + + LVA Sbjct: 180 EPIISLDMVADDPLIIFPRELGPGFHDAILSAYQLAGVTPTMGQQAPQIAGTVPLVAAGL 239 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 +S +P + +H G+ +SE P+A + R PL +T R C Sbjct: 240 GVSVVPRSL--SQIHAGGVTFHAISEPAPRATLAVAIRTGQNM-PLVTRFVTVLRTAC 294 >UniRef50_A0QTM3 HTH-type transcriptional regulator AlsR n=7 Tax=Actinomycetales RepID=A0QTM3_MYCS2 Length = 304 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 115/296 (38%), Gaps = 9/296 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R F V + A+ L+M+QP LS+ I++LE L L R ++ V LT A Sbjct: 1 MELRHLRYFRAVGEELHFGRAAERLHMAQPPLSQQIRQLERELGCTLLTRTTRSVELTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G ++ + A IL+ + AA + ++ + G+I IG S + SL+P ++ + P + Sbjct: 61 GHTYLRRAVEILDAVDAANTEAQRIASGIQGRIAIGCVGSATYSLLPQLVRALGESLPGI 120 Query: 125 KVRIM-EGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI- 182 +V + E + I L G +D + + + H Sbjct: 121 EVTVRGEMLAPAQIEALLSGGIDLAL--LRPPVRQEAVLTHTVRRDGLVVALPADHALAI 178 Query: 183 -GARSIKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 A ++ L D + + T H ++ + D P++ S ++LVA Sbjct: 179 RDAVTVADLRDEDFVVHTGHGRSVMSNLVATVCADAGFLPRIRQEVSETSTLVTLVAAGL 238 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 ++ +P+ + G+ +P+ DS ++ Sbjct: 239 GVAIVPDPTTALDIA--GVRYVPLRPTDLGVDLVAAHTGDSPLITNVLRVLRTLTE 292 >UniRef50_D0J615 Transcriptional regulator, LysR family n=2 Tax=Comamonas testosteroni RepID=D0J615_COMTE Length = 306 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 75/302 (24%), Positives = 134/302 (44%), Gaps = 6/302 (1%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 + +RA V +++ S A+ ++++SQ ALS I +E + A+LF R ++ V LTD Sbjct: 5 NLSTKDLRAVVALSQTKSFGQAALLVHLSQSALSALIARVEAQIGARLFERTTRAVELTD 64 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 AG F HA IL + + A + G + + S++ SL+P V + F + HP Sbjct: 65 AGHVFIAHAQEILRDTQRALRAVTDTVQLRTGSVTVAALPSLAASLLPKVFAEFTRIHPG 124 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA-- 181 V++ +++ + +R G++DF + P + +E+L+E QF + C HP Sbjct: 125 VRLSLLDTLSGPAFDLVRDGKVDFALTA--ADPKQEDLAYEQLMEDQFFLICPDDHPLSK 182 Query: 182 -IGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 G +I+ LDY S + + L + + + +LV+ Sbjct: 183 HAGPVAIENTLDYPHVSMPSSASVRQYIDADLHSKGLYFAPVFEVDHIATIGALVSAGLG 242 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 +S LPE L LV +P+S + ++ RR + ++ +L R L Sbjct: 243 ISALPETAV-SLLQAGRLVQIPLSPPGIQRPLGMVMRRHAPRSSAAKALEALIRASLHNL 301 Query: 301 QS 302 S Sbjct: 302 AS 303 >UniRef50_B4STD8 Transcriptional regulator, LysR family n=6 Tax=Gammaproteobacteria RepID=B4STD8_STRM5 Length = 295 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 112/297 (37%), Gaps = 8/297 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + Q+ V +A +G+ A+ ++ Q ALS I LE+ L LF R + V T A Sbjct: 1 MNLKQLEFAVALAEEGNFTRAAERCHVVQSALSHQIANLEQELGTPLFERLPRQVRATAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE HA +L LR + D+ G++ G + IG +S++ + A+++ F Q HPQV Sbjct: 61 GEVLLVHARQVLASLRHLRADVAAVSGEVRGLLAIGQISSLTDIDVVAMLAAFQQAHPQV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG- 183 + ++ + +I +++ ELD + + L E+ P H G Sbjct: 121 EFQLRVDKSEDLIAQVQSRELDVALVGLAPSAGLDGVCHQMLQEEDLVAVLAPSHRLAGH 180 Query: 184 -ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + L D + +Q + V V + Sbjct: 181 TRLPLAALQDEALVDFPRGTGARRQTDDAFAAAGLPHTVRFEVNLMELIERFVRHGLAVG 240 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 +P + QG+V +P+ P +L+ TP + + G Sbjct: 241 IVPALIADGF---QGVVQIPLQ-PTPTRRVHLVW--QRLPTPAARAFVAAVLSRAGA 291 >UniRef50_Q67MJ1 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MJ1_SYMTH Length = 273 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 60/268 (22%), Positives = 107/268 (39%), Gaps = 9/268 (3%) Query: 31 MSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHASLILEELRAAQEDIRQRQ 90 ++QP+LS+ I+ LEE L LF R V LTDAGE+ HA IL ++ AA + +R Sbjct: 2 VAQPSLSQQIRRLEEELGVLLFDRSRTPVRLTDAGEALLPHAEAILRQVEAAGAAVEERI 61 Query: 91 GQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQLVSMINELRQGELDFTIN 150 G +G++ +G L+P I+ + Q++P V++ + E + E D T+ Sbjct: 62 GLRSGRLVLGSLPVTGSRLLPRAITAYRQRYPGVQITLREEPTQRLTELALADETDLTLT 121 Query: 151 TYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG------ARSIKQLLDYSWTMPTPHGSY 204 T E ++ LL + + P HP A + + + + P + Sbjct: 122 TL--PVGSDELDWQPLLTEPILLALPPDHPLAADGPPHPAIPLSAVAGEPFLIMKPGYGF 179 Query: 205 YKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSKLPEEMGCDPLHGQGLVMLPVS 264 + +PQ+ ++VA ++ +P+ L V +P++ Sbjct: 180 RDLVLAACQAAGFSPQIAFESAQIETLQAMVAAGLGVTLVPQMAADRSLRPSP-VFVPLA 238 Query: 265 EILPKAAYYLIQRRDSRQTPLTASLITQ 292 L RRD + + Sbjct: 239 GAPLTRTLALAWRRDRPLPRSAQAFLKL 266 >UniRef50_B1ZCQ9 Transcriptional regulator, LysR family n=3 Tax=Rhizobiales RepID=B1ZCQ9_METPB Length = 311 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 116/297 (39%), Gaps = 8/297 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ R + VA + A++ L ++QPALS+ I++LEE QLF R ++GV LT+A Sbjct: 4 MELRHFRYALAVAEELHFTRAAQRLGIAQPALSQQIRQLEEEFGTQLFHRLTRGVELTEA 63 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRS-LMPAVISRFHQQHPQ 123 G + +A L +R+ GQ+ IG S S + ++ I RF +P+ Sbjct: 64 GRALLPYARAALAAADEGTAAVRRAAKGELGQLRIGFTGSASFNPVVSGTIGRFRDAYPE 123 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA-- 181 V++ + E ++ LR+G + D L E+ H Sbjct: 124 VELDLQEQVTSMLLRSLREGRIQLAFGRAADDETD-GLRRIALPEESLWAALPAKHRLAG 182 Query: 182 IGARSIKQLLDYSWTMPTPHGS--YYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 G + L + + Y + +P++ ++ ++LVA Sbjct: 183 AGRIDLASLAADPFILYPRANGRLLYDAIVAACGRAGFSPRIVQEAPQMASTVNLVAAGV 242 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 ++ +P M L + + +S A+ L+Q D T + I Sbjct: 243 GVALVPASM--RLLQAPSVSYVELSTPGTVASLSLVQGPDLLMTASVRNFIRCLEDA 297 >UniRef50_C8WV81 Transcriptional regulator, LysR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WV81_ALIAD Length = 305 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 66/294 (22%), Positives = 118/294 (40%), Gaps = 3/294 (1%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 +V + Q+R FV V + S A+ L++SQPA+S+ +Q LE+ L +L R + + + Sbjct: 3 RVDL-QLRVFVTVVEENSFTRAAEKLHISQPAISQHVQTLEQRLGVRLIDRGRRRLQVNP 61 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 AG Y+HA IL R + I Q AG +++G + ++P VI+RF + +P Sbjct: 62 AGRIVYEHAKEILALYRRMERLIADMQEMPAGPVHVGASLTYGEYVLPHVIARFRKAYPA 121 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA-I 182 V+ + ++ + + +LD I Q + E E + + P P Sbjct: 122 VQPSVSIANTQTIAHAVAVRQLDIGIV-EGQDVVEDEVVLTPFAEDEMLVVASPASPWYA 180 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 A L +W + P + L P+ V + VA L+ Sbjct: 181 EAPDRSLLERATWFIREPGSGTREMTDRLFTQLGIQPRDLVEYTSSQVIKESVAAGLGLA 240 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 L + L L LP+ K + ++ + + +T + L + Sbjct: 241 CLSRWVVARELAWGMLRTLPIPCAPVKRTFSIVTPKSAFETKASKLLYSFLMEH 294 >UniRef50_A8IAC4 Transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IAC4_AZOC5 Length = 313 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 71/300 (23%), Positives = 126/300 (42%), Gaps = 8/300 (2%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M+ + + Q+RAFV VA+ GS A+R+L +SQ ALS+++Q+LE L +L R ++ V Sbjct: 1 MSMNMNLRQLRAFVAVAQTGSFSRAARLLGLSQSALSQAVQQLEADLGVRLLDRTTRSVQ 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 L+ G F +L +L +D+R + G + + S++ L+P V+++F + Sbjct: 61 LSAIGREFLPGVQRVLADLDHQLQDLRDLKEHRRGHVTVTCVPSVALRLLPQVLAQFQEA 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 HP V V + E +I LR G+ + + D + LL FA+ R HP Sbjct: 121 HPMVSVAVREAPRHQIITALRSGDAELGVANV--PGDDPDLDSTFLLTDSFALVMRRDHP 178 Query: 181 AIG--ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 + + ++ P ++ L E + +++V Sbjct: 179 LAAHESVTWEEAGQAGLIAMAPGTGIRLEMERGLPA---PAVPHHEAEHPATLLAMVEAG 235 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 ++ LP + GL P+ E + +LI+R TP +L Sbjct: 236 VGVAPLP-GLAWPRPDHAGLTFRPLVEPRVERQLFLIKRAGRDLTPAGRALHRAILAGVA 294 >UniRef50_B1M8F7 Transcriptional regulator, LysR family n=4 Tax=Rhizobiales RepID=B1M8F7_METRJ Length = 304 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 74/305 (24%), Positives = 121/305 (39%), Gaps = 9/305 (2%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 M +++ +R F VA S A++ L +SQP LS+ I++LE + LF R S+ V Sbjct: 1 MVRPMELRHLRYFAAVAEHLSFTAAAQSLGVSQPPLSQQIRDLEVEIGVNLFERSSRRVV 60 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 LT AGE F +A +L ++ A + R AG +NIGM +S+ +I F Q+ Sbjct: 61 LTAAGEDFLGNARAVLAQVSDAVDRARTIGTGAAGILNIGMTSSVLAGPAGCLIRAFEQR 120 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 V VRI E I L+ D + P D + ++ + H Sbjct: 121 FRAVDVRIHEMAPTDQIAALKANRTDL--SFLRSPPEDPDLVAHMAWPERLCVAVPREHA 178 Query: 181 AIGARSIK--QLLDYSWT-MPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAK 237 RS+ + + + + TP + S+ I+LVA Sbjct: 179 LAAGRSVAIDVFRSEPLISLGLESSRFAADIYHACIQRGFTPSISQQVNEASSLINLVAA 238 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 L+ +PE +G +V+LP+ A Y + P+ + + R E Sbjct: 239 GFGLAIIPEFVGRA--RHPDVVVLPIKPSFLSADVYALHHTRR--NPVIDNFLALIREEA 294 Query: 298 GYLQS 302 L + Sbjct: 295 PGLIA 299 >UniRef50_B9JZE6 Transcriptional regulator LysR family n=1 Tax=Agrobacterium vitis S4 RepID=B9JZE6_AGRVS Length = 309 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 69/310 (22%), Positives = 123/310 (39%), Gaps = 18/310 (5%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R V VA +G + A+ L + QP LS+ I+ LE + LF R+ +G+ LT+A Sbjct: 2 IELRHLRYAVTVAEEGHLTRAAERLGLQQPPLSQQIKALETEVGVTLFIRQPRGMALTEA 61 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRS-LMPAVISRFHQQHPQ 123 G +F A IL ++ A E ++ G++ IG S L+P+++ P Sbjct: 62 GVAFIARARQILADVDMAVEAAQRAARGEIGELAIGFTTSAVFHPLVPSIVRAMRLSSPS 121 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQ---GPYDHEFTFEKLLEKQFAIFCRPGHP 180 +K+R+ EG ++ EL G LD + E + + + HP Sbjct: 122 LKLRLDEGSTTELLCELSAGRLDAAFIRATAGALPGSGPTLSIETVDIEDMVLALPDTHP 181 Query: 181 AI--------GARSIKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSA 230 ++ L ++ + Y ++ +P V + Sbjct: 182 LALHSQNGDRDTVALAALAGETFVLYRRPLAQGLYDRIIAACQAAGFSPNVAQEAPKLVS 241 Query: 231 CISLVAKSDFLSKLPEEMGCDPLHGQGLVMLPVSE-ILPKAAYYLIQRRDSRQTPLTASL 289 +SLVA LS +P+ M L G+ + A L RRDS + + Sbjct: 242 TLSLVAAGLGLSIIPQSMAR--LETSGVAYRRFAPGSGLDAPLSLAYRRDSYRG-ALKTF 298 Query: 290 ITQFRRECGY 299 + + RR+ Sbjct: 299 VEEVRRQVST 308 >UniRef50_A0KPM6 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=A0KPM6_AERHH Length = 297 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 121/294 (41%), Gaps = 6/294 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I +R FVE+ R+ S AS L ++QP +SK I+ +EE L L R + TLTD+ Sbjct: 1 MDIRALRYFVELVREQSFTRASEKLFVTQPTISKMIRNMEEELGQPLLSRAGRRFTLTDS 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + A IL E++ + ++ Q G++ +G+ + +I + ++P+V Sbjct: 61 GRVLFNRAQTILAEMQQLEAELADLQSLQFGRLALGIPPMVGHVY-ADLIRAYRSRYPKV 119 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCR--PGHPAI 182 ++ I+E + + +GELD I + +L + + P Sbjct: 120 ELSIVEYGGRRIEQAVLEGELDLAITMLP-TKEGGALSALELDQYPIQVVLPDLPRWRDC 178 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++ L D + + T + ++L + PQV + ++V ++ Sbjct: 179 PEIRLEALCDEPFLLYTQAFTLSERLEQACRVAGFEPQVAARSSQWDFLTAMVRSGMGVA 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 LPE + L GLV+ P+ +I + + + + R + Sbjct: 239 FLPEPICRR-LAPDGLVLRPLV-PELSWRLGVIWPSERYLSRTAEAWLALCREQ 290 >UniRef50_C5BQI4 Transcriptional regulator, LysR family n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BQI4_TERTT Length = 305 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 5/293 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I Q+R V +A + + A+ L+++QPALS+ +++LEE + + LF R +G+ LT A Sbjct: 1 MDIKQLRYLVGIADEQHVGRAAERLHVTQPALSQQLRKLEEEIGSPLFERHHRGMRLTIA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ +HA IL ++ A+ +I ++IG S++ L+P ISR + P + Sbjct: 61 GQVMLKHARQILAQMEDARNEIDSLADTGECLVHIGTIQSMNFHLIPTAISRLQESEPNI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 VR+ E + + + + +LDF I + E+L + F + HP Sbjct: 121 HVRVAELSGSQLEDSVAKEKLDFGIGFL--PTIREDLVTEQLFSENFYLAVHRSHPLAEQ 178 Query: 185 --RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 KQL S + T + + P++ V T ++ + + S Sbjct: 179 EVVDFKQLHGLSMALLTDRYISRRLFDTAALRASIRPKIKVETNTTASLLLIACVSQLAV 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 LP + + + M+ + + + LI +++ T SL R Sbjct: 239 VLPRAAIPEWIQS-KVAMITLKNPTLQRSVGLIWGKNNVLTHQALSLAASIRD 290 >UniRef50_A4JMP2 Transcriptional regulator, LysR family n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JMP2_BURVG Length = 299 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 63/294 (21%), Positives = 120/294 (40%), Gaps = 8/294 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT--LT 62 + + R F E+ RQG+ A++ L +SQPALSK+I+ LE+ L L R +GV LT Sbjct: 1 MDLKAFRYFDEIVRQGNFGKAAKRLPLSQPALSKAIRLLEDELGVTLLERGRRGVAVKLT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 AGE QHA IL E Q D+ + G++ +G+ S L A ++ F +++P Sbjct: 61 SAGEVVLQHARSILAERERMQFDLDALRDLDRGELRLGLPPVGSAELFAAPLAEFRERYP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 V + + E + +R GEL+ P + + + + GH Sbjct: 121 GVSIHLHEHGSAELEQAVRDGELELAATML---PVRTDLQAMFIRREPMVLAVPRGHALE 177 Query: 183 GARS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + +L + + ++L E Q T + ++LVA Sbjct: 178 THVRVHLHELNGVPFIALNEGFALTRRLREACIAQGFTINEVAHSAQPNFALALVAAGLG 237 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 ++ LP + + + ++ + + ++ R+ + + + + + Sbjct: 238 VTCLPRLVARRHGNAG-VRLIDLDAPGLEWRVAIVWRKGTTLSWAARAWLDLIK 290 >UniRef50_A5D1Z5 Transcriptional regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D1Z5_PELTS Length = 297 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 58/302 (19%), Positives = 119/302 (39%), Gaps = 28/302 (9%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQ-----------ELEEGLAAQLFF 53 +++HQ+ + VA+ S A+ I+ +LE L LF Sbjct: 1 MEMHQLEYVLAVAKYNSFTRAAEE-----------IKISQSSLSQQISKLENELGVSLFA 49 Query: 54 RRSKGVTLTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAV 113 R ++ V LT AG F +A I+ E A+ I++ G +N+G+ I +P + Sbjct: 50 RTTRSVQLTPAGAEFVAYAKRIISEAIEARRCIQEYVAVEKGHLNLGVIPIIGYYNLPNL 109 Query: 114 ISRFHQQHPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAI 173 ++ F + +P + + ++E Q ++ L+ ++D I + + + LL Q + Sbjct: 110 LANFAKNYPGITISLLEEQCDELLRLLQASKIDAAIVQHVIPEM--QLQYYPLLTDQMVV 167 Query: 174 FCRPGHPAIGARS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSAC 231 HP +S I++L + + + P +Y P+V V C Sbjct: 168 VTYDRHPFSTRKSVDIRELKNERFIVTPPVSGHYHDFINACHLAGFEPKVLVTCSMVRTI 227 Query: 232 ISLVAKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLIT 291 + LV + ++ L + GL ++P++ + L +++ +P + Sbjct: 228 LGLVREEVGITVLSSCVAALD-KTPGLSIIPLTPPV-NRKIVLAVSKNNGLSPALKVFVK 285 Query: 292 QF 293 Sbjct: 286 YI 287 >UniRef50_B0T3V7 Transcriptional regulator, LysR family n=1 Tax=Caulobacter sp. K31 RepID=B0T3V7_CAUSK Length = 294 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 62/293 (21%), Positives = 113/293 (38%), Gaps = 5/293 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + + QIRAFV VA S A+ +L +SQPAL+ I++ EE L +LF R ++ V LT Sbjct: 1 MHITLGQIRAFVTVASTFSFTRAAEVLGLSQPALTNRIRQFEESLGLRLFDRSTRSVELT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 + G ++ E A + R ++ G + + S + +L+P +I+RF +P Sbjct: 61 NVGRELLPIFRRLVGEFEGAVINARDYASKVKGVVRLACLPSCAATLLPDLIARFQIDNP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 + + + +R+ +DF I + +L + + HP Sbjct: 121 SATFVVEDALNSRVATMVREDRVDFGIGM--ADGEAGDLELTRLFDDTLQVVHPREHPIA 178 Query: 183 GAR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 A ++ L Y + S + +T S ++LV Sbjct: 179 QAPVIDVETLSHYPLILMNRGSSVRDLVEGAFLAAGRTATPACEVTYMSTAVALVRAGLG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 LS LP + + + L++RR++ P+ + I Sbjct: 239 LSILPSTAVELRSQ-PDVAARSIDDPAFVRTLVLVRRRNAPLRPVVEAFIDSI 290 >UniRef50_Q4KEU3 Transcriptional regulator, LysR family n=8 Tax=Pseudomonas RepID=Q4KEU3_PSEF5 Length = 305 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 128/294 (43%), Gaps = 8/294 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + ++R F+ VA + A+ L+++QP L++ I LE L +LF R S+ VTLT Sbjct: 2 LDLRKLRYFLTVAEELHFGRAALRLHLAQPPLTRQISALETELGFRLFDRTSRTVTLTAQ 61 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRS-LMPAVISRFHQQHPQ 123 G F +A +LE++ AQ + AGQ+ +G +SI+ S L I F Q+ P Sbjct: 62 GRHFLPYARAVLEQVDLAQVMAGKLAAGCAGQLALGYASSIALSDLFSQAIQAFAQRFPD 121 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI- 182 V++ ++EG VS +++ G +D ++ + L ++ P Sbjct: 122 VQLTLVEGASVSQWSQIVDGRIDIGMSRMQPPSEQSDIQSLSLGDEPLVAAISSDSPLAA 181 Query: 183 -GARSIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 ++ +L ++ + + + +L + G ++ I+LVA Sbjct: 182 QAQVTLAELSEHPLILFPADYGSGLNEAIEQLYRRNGLPLRPGPSGRQITSIIALVAAGQ 241 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 ++ +P L +G+ P+++ A ++ R+ R + L + + Sbjct: 242 GIALVPR--CTQTLAKKGVTYRPLADPSATAQLLVLTRKQGR-SQLVEAFMGVL 292 >UniRef50_Q0KE24 Transcriptional regulator, LysR-family n=2 Tax=Cupriavidus RepID=Q0KE24_RALEH Length = 305 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 65/295 (22%), Positives = 119/295 (40%), Gaps = 6/295 (2%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + Q+R F+ VA G A+ ++ ++QPA+S+ + ELEE L +L R ++ V LT Sbjct: 1 MNYTLRQLRVFLAVANTGGFSRAADVVGLTQPAVSRGVAELEEALGVRLLDRTTREVVLT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 +AG + +L +L E+ RQ + G++ I +IS LMP ++ Q+P Sbjct: 61 EAGHALAPALERLLGQLDDTLEETRQLGERYRGRVVIAGAPTISARLMPLYVAACAAQYP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 ++++ + + + ++R G +DF + E + F CR HP Sbjct: 121 EIRLTVRDNVQADGLEQVRAGAVDFGV--LIDPLVRDGLVVEPVATDPFCFVCRRDHPLA 178 Query: 183 GARS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + S L + + + P V ++ +V Sbjct: 179 QSPSVPWAALHGMQLVLLDFASGSRPLIDRVFGRHGVVPLVVQELGHSASVFGMVEAGIG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 S LP P LV P+ + + +++R D +P A++ RR Sbjct: 239 ASVLPSFSLPLPAASP-LVWRPLV-PCEERSIVMVRREDRSLSPAAAAVWDLVRR 291 >UniRef50_Q9RYH7 Transcriptional regulator, HTH_1 family n=2 Tax=Bacteria RepID=Q9RYH7_DEIRA Length = 316 Score = 250 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 65/284 (22%), Positives = 129/284 (45%), Gaps = 8/284 (2%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 +++ +R F+ VA + ++ A+ L + QP LS+ I+ELE + LF R +GV LT Sbjct: 15 IPMELRHLRYFLAVADERNVTRAAARLGIQQPPLSQQIRELEREIGTPLFHRVPRGVELT 74 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSL-MPAVISRFHQQH 121 +AG +F + I ++ A + R+ G++ +G + S + + ++ R+ + Sbjct: 75 EAGHTFLRLVQSIPAQVEGATHEARRAGRGETGELRVGFTGAASINPQVQGLLRRYRDLY 134 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P V++ + E V++++ELR +LD + + + T + + GHPA Sbjct: 135 PDVRLTLTEKNTVTLLDELRSHQLDAVLAR-PLPQHLGDLTLTLVAREPMVAVVPRGHPA 193 Query: 182 IGAR--SIKQLLDYSWTMPTPHGS--YYKQLSELLDDQAQTPQVGVVCETFSACISLVAK 237 R +++L D ++ Y + + P++G + + +SLVA Sbjct: 194 AQTRPLPLERLRDETFITTPREFGPLIYDTVWQACRAAGFEPRLGQLAPQMLSIVSLVAA 253 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSR 281 +S +P+ M L+ +G L + +P L+ R R Sbjct: 254 GLGVSLVPDAM--RRLNLEGCEYLELRPPVPTVDLTLLCRPHER 295 >UniRef50_C7H9N7 Transcriptional regulator, LysR family n=2 Tax=Faecalibacterium prausnitzii RepID=C7H9N7_9FIRM Length = 291 Score = 250 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 67/293 (22%), Positives = 122/293 (41%), Gaps = 4/293 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ I F+ +A S A+R L SQ A+S + +LE L LF R K V LTDA Sbjct: 1 MELRTINTFLHIAELHSFSRAARELGYSQSAVSAQVAQLEAELETPLFDRVGKTVRLTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++F +A +L A+ ++ + ++G + + + S+ + +P ++ R+H PQV Sbjct: 61 GQTFLTYARSLLATAEQAKAALQPARQ-VSGTLRVALADSVCSTFLPDLLQRYHALCPQV 119 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + M+ L ++D + F + + GHP G Sbjct: 120 ELVLRTATDDEMLQMLGSNQIDLAYT-LDKPLLQPSFVLAVDEPEPICVVAPAGHPLAGQ 178 Query: 185 --RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++++L + + SY L + + Q + + + S +V LS Sbjct: 179 AEVTLQELAGQEFLLTERGMSYRDALDQCMAAQGLAIKPFLELGSASLLCQMVEHGMGLS 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 LPE + + L L L V + L RD TP + IT ++ Sbjct: 239 FLPEYIVQNALAAGTLARLNVPACRVEMRRQLFYHRDKWLTPQMKAFITLVQK 291 >UniRef50_Q7WJM8 Probable LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7WJM8_BORBR Length = 323 Score = 250 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 64/284 (22%), Positives = 114/284 (40%), Gaps = 4/284 (1%) Query: 17 ARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHASLIL 76 G++ + +SQPALSK +++LE + +LF R +GVT T HA I+ Sbjct: 41 CETGNLTEVANEYGISQPALSKWLKDLEADIGQRLFVREPRGVTPTACARELQAHARAII 100 Query: 77 EELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQLVSM 136 L A+ + AG +++G + ++P I RF +P V V ++E + + Sbjct: 101 GRLERARTAVDHIASGFAGHLSVGFSPVVGPVVLPESIRRFRAAYPDVLVSVIEASIDLL 160 Query: 137 INELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGAR--SIKQLLDYS 194 + LR G+ D + + + E L ++ + HP G R S + Y Sbjct: 161 LPGLRNGDFDIVVGRLEEVAMPEDVRCETLYDEPVCLVAGRAHPLAGRRRISWEDAQAYP 220 Query: 195 WTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAKSDFLSKLPEEMGCDPL 253 W P +L L Q P+ V + ++L+ +SD ++ + + Sbjct: 221 WISPQQGTPLRMRLEMELAVAGQPLPRHAVESTSVQTNVALLDRSDMIAPMSRRLAEHFQ 280 Query: 254 HGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 L +LP++ ++ R D TA I R+ Sbjct: 281 RQGVLRILPLTL-GSGGPIGMLWRADGVHGTHTAHFIACLRQAV 323 >UniRef50_C1DMS0 Transcriptional regulator, LysR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DMS0_AZOVD Length = 307 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 75/298 (25%), Positives = 126/298 (42%), Gaps = 8/298 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++I Q++ FV VA + + A+ L ++QPALS+ IQ+LEE + A L R SK V LTDA Sbjct: 1 MEIRQLKYFVAVAEELNFNRAAERLYITQPALSRQIQQLEEAIPAVLLERNSKRVALTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++FY A IL +L+ A ++ R G + IG+ S +P V+ F + HP V Sbjct: 61 GQAFYHQALNILAQLQRAADESRLLAEGKKGSLVIGIFGSSILDFIPRVLLEFGRTHPAV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + + I LR+ L N G + + E + + + HP Sbjct: 121 EISLHPMDKDAQIQALRERRLTIGFNRLVPG--EPDIEQELVRREALMLALPAKHPLAAR 178 Query: 185 RSIK--QLLDYSWTMPTPHG--SYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 +I+ ++L + + + L D P+V + I+LVA Sbjct: 179 DAIELGEVLQEPFILYPRGVRRGLTTHVRRLFADYDALPRVAQEVTDVTTSIALVAGGLG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 L +P L G L + + R+ +PL + + R+ Sbjct: 239 LCVVPRSAVNLRLPGVEYRALRCRG-KAEIELACLYRKGDG-SPLLRAFLATVRQLAS 294 >UniRef50_A4XPG0 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas mendocina ymp RepID=A4XPG0_PSEMY Length = 294 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 67/291 (23%), Positives = 124/291 (42%), Gaps = 5/291 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + +H ++ F+ VA GSI + L++SQPA+++ I+ELE L +LF R +GV LT+ Sbjct: 1 MNLHHLKVFLAVAEAGSISAGAERLHISQPAVTREIRELEANLDLRLFDRLPRGVQLTEG 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ +A I +AA+ D+R G++++G A++ L+P +ISRF HPQ+ Sbjct: 61 GQRLLDYARRIFALEQAAERDLRDFAQLEQGELHLGASATLGAYLLPPLISRFRALHPQI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 V + ++ +L G + ++ L P HP Sbjct: 121 FVSLEVSNTEAVTRQLDDGRISLGFV--EGPFAQADYDHRLLARDALLPVVAPRHPLART 178 Query: 185 RS---IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 + +L Y M P + P+ G+ + A L+A + Sbjct: 179 AAPLQASELQAYPLYMREPGSGARASVEHAYRVHGLEPRAGMAIGSTEALKRLLADGQGI 238 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQ 292 + L + + L L L V ++ + +++ R + +P A+ + Sbjct: 239 AWLSQRVVERELASGELQRLTVQDLQIERELHVLWRPGASLSPAPAAFLAL 289 >UniRef50_Q5FRA7 Putative transcriptional regulator n=1 Tax=Gluconobacter oxydans RepID=Q5FRA7_GLUOX Length = 308 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 67/300 (22%), Positives = 129/300 (43%), Gaps = 13/300 (4%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ + A + +A + ++ A+ L + QP L++ ++ +E+ L QLF R ++G+ LT A Sbjct: 2 IELRHLHAVIAIAEERNLTRAAERLGIQQPPLTRLLKGMEQELGVQLFERHARGMRLTPA 61 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSL-MPAVISRFHQQHPQ 123 G S + A ++E + ED+R+ AG+++IG S +P ++ +F + P Sbjct: 62 GRSMLKGAYDVIERMDETVEDVRRIVRGEAGELSIGFTNSALCHPSLPDMLGQFRETWPD 121 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V + + EG ++ LR+ +D + E ++E+ + H Sbjct: 122 VGLTLTEGNSSQLLGALREDTVDVAFVRTSIPYVS-DVVVELIVEEPMVVAVPRTHRLAK 180 Query: 184 ARS-----IKQLLDYSWTMPTPHG--SYYKQLSELLDDQAQTPQVGVVCETFSACISLVA 236 + +L D + + YK + + TP++ A ++LVA Sbjct: 181 EAPAGGLKLAELEDEDFILYQSQYNNGLYKTIVDACLGAGFTPRIRQKGPQLLAALNLVA 240 Query: 237 KSDFLSKLPEEMGCDPLHGQGLVMLPV-SEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 +S +P+ M H +V +P+ S A YL+ R T I Q RR Sbjct: 241 GGLGISLVPQSM--QQHHAGQVVYIPLSSRTALTAPLYLVFRSVR-MTGAKLYFIHQARR 297 >UniRef50_B2TGB5 Transcriptional regulator, LysR family n=2 Tax=Burkholderia RepID=B2TGB5_BURPP Length = 331 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 75/298 (25%), Positives = 133/298 (44%), Gaps = 3/298 (1%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++K Q+ V++ S+ A+ +M+QP +K ++ELEE + LF R +GV T Sbjct: 23 RLKTRQLALIVQLDTHRSVLRAADAAHMTQPGATKLLRELEETMGVPLFERHPRGVEPTW 82 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 GE +HA +L ELR A +++ + L GQ IG + + +L+P ++ ++ PQ Sbjct: 83 YGEVLIRHARSVLAELRHAYDEVSALKAGLTGQAMIGTEVTAATNLVPQAVALLKKRFPQ 142 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 ++V I ++ L++G+LD + + L E Q A+F R GHP + Sbjct: 143 IRVNIEMEFSEVLVQRLQEGKLDMIVARIRNPDDLAALHYAPLAEAQHALFARAGHPLVK 202 Query: 184 ARSI--KQLLDYSWTMPTPHGSYYKQLSELL-DDQAQTPQVGVVCETFSACISLVAKSDF 240 +++ +L +W +P Q ++L + P V + SL+ SD Sbjct: 203 RKTLSWDELAPQTWILPPKGNVMRNQFTQLFLERHLALPTDVVESSSLPVITSLLQMSDM 262 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 ++ L E L LP L ++ RR R +P +++ R G Sbjct: 263 IAPLAREPVRPYCIAGALEPLPFELDLKLGPAGIVTRRGDRLSPGARAMLQALREAAG 320 >UniRef50_D2Q131 Transcriptional regulator, LysR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2Q131_9ACTO Length = 298 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 62/299 (20%), Positives = 113/299 (37%), Gaps = 14/299 (4%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+++FV VA + ++ A+ L+++QP+LS+ I LE L +LF R K LT A Sbjct: 1 MELRQLQSFVVVAEELNVGRAATRLHLTQPSLSRQIAALERDLGVELFARIRKRFVLTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GES A +L A D ++ Q G + + S + ++P ++ F HPQV Sbjct: 61 GESLLADARDLLRRADDAVRDAQRTQRGELGTLRLRFVQSATFEVLPKLLGAFRDSHPQV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGP-------YDHEFTFEKLLEKQFAIFCRP 177 + + + + L+ G +D + + + Sbjct: 121 VLDLETMTTLRQVEALKDGRIDVGLLRLPEPGTQLGDTKPAEGLASRVVSRDPLVAVLPA 180 Query: 178 GHPAI--GARSIKQLLDYSWTMPTPHGS--YYKQLSELLDDQAQTPQVGVVCETFSACIS 233 HP + +L + T + ++ D TP + +S Sbjct: 181 KHPLARRRRIRLAELAAEDFVFYTRPSGPAVHDRIVGYCRDAGFTPSITQAAADVQTIVS 240 Query: 234 LVAKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQ 292 LVA +S L +V +S+ LP L D+R +P+ + Sbjct: 241 LVAAGLGVSLLIAPTPRTDPEA--VVYRELSDDLPPWELSLAWSPDNR-SPVLQRFLQL 296 >UniRef50_P52661 HTH-type transcriptional regulator gbpR n=1 Tax=Azospirillum brasilense RepID=GBPR_AZOBR Length = 342 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 62/288 (21%), Positives = 123/288 (42%), Gaps = 4/288 (1%) Query: 1 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT 60 + ++K+ ++ FV + ++ A+ L MSQPA SK + +LEE L LF R +GV Sbjct: 12 LKARLKLRHLQLFVALDEHRNLHRAAASLTMSQPAASKLLGDLEESLGVTLFERHGRGVE 71 Query: 61 LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ 120 G +HA IL L+ A E++ +G ++IG + + L+ VI+ + Sbjct: 72 PNWYGGLMIRHARTILSGLQEAGEELNDLLAGHSGSVSIGTVMAPAVELVVPVITTLTRD 131 Query: 121 HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP 180 HP +K+ + + +RQG +DF I F ++++ ++ CR GHP Sbjct: 132 HPDLKIAVAVETSDVLAERVRQGVMDFAIGRLPDHVDASCFDYQEISSEELCFVCRDGHP 191 Query: 181 AI---GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQV-GVVCETFSACISLVA 236 + + L+D +W + ++ L + P + + +++VA Sbjct: 192 LLRLGRPLTAADLVDATWILQPLGSLLRSRVEALFRAEGVPPPRKVIESASPVISLAMVA 251 Query: 237 KSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTP 284 ++D ++ + ++P + Y + +D +P Sbjct: 252 ENDSVTVFARALAQVFSPTGSCTIVPFHKRFSVEPYGIFWLKDRPLSP 299 >UniRef50_P42722 HTH-type transcriptional regulator cfxR n=9 Tax=Betaproteobacteria RepID=CFXR_RALEH Length = 317 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 66/299 (22%), Positives = 127/299 (42%), Gaps = 5/299 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + + Q++ FV VAR S A+ L+++QPA+S +++LE + LF R +TLT Sbjct: 6 RALTLRQLQIFVTVARHASFVRAAEELHLTQPAVSMQVKQLESVVGMALFERVKGQLTLT 65 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 + G+ HAS IL E++ A+E ++ + G I IG+ ++ S+ P +++ F HP Sbjct: 66 EPGDRLLHHASRILGEVKDAEEGLQAVKDVEQGSITIGLIST-SKYFAPKLLAGFTALHP 124 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 V +RI EG +++ L+ +D + + P + + E + + P HP Sbjct: 125 GVDLRIAEGNRETLLRLLQDNAIDLAL--MGRPPRELDAVSEPIAAHPHVLVASPRHPLH 182 Query: 183 GAR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 A+ +++L ++ + P + D TP + + V Sbjct: 183 DAKGFDLQELRHETFLLREPGSGTRTVAEYMFRDHLFTPAKVITLGSNETIKQAVMAGMG 242 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 +S L L + +L V+ + +++ R +P + S Sbjct: 243 ISLLSLHTLGLELRTGEIGLLDVAGTPIERIWHVAHMSSKRLSPASESCRAYLLEHTAE 301 >UniRef50_UPI0001C3125C transcriptional regulator, LysR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3125C Length = 315 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 68/302 (22%), Positives = 131/302 (43%), Gaps = 8/302 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + ++R EVA GS A+ L ++Q A+S+ + LE + +L R ++ V LT+A Sbjct: 2 IDVRRLRVLREVAVHGSFSAAAHALTLTQSAVSQHVATLEREVGQRLVERGTRPVELTEA 61 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + +HA+ I L A++++ + G+ G++ G + +LMP RF + HP V Sbjct: 62 GYALTRHATGIFARLDDAEQELAEIAGRRHGRLRFGTFPTALATLMPPAFERFGRTHPDV 121 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYD---HEFTFEKLLEKQFAIFCRPGHPA 181 + +++ L ++ L GELD + ++ + + L + F GH Sbjct: 122 TLTVVDDHLQRLVPRLETGELDLALIYDHEALPEISARDLERMPLADDPFQAVLPAGHRL 181 Query: 182 IGARS---IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKS 238 R + L W +P+ ++Y+ + TP + + + A +LVA Sbjct: 182 ARRRRPLELSDLSGEPWIGGSPNSAWYRITAHACRLAGFTPHASLASDDYIAVQALVAAG 241 Query: 239 DFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 +S +P PL G+ + ++ P + RD P A+++ R Sbjct: 242 LGVSLIPGLAVAHPL--PGVEVRKLASGAPVRRISAARPRDGYHGPPVAAMLESLRAAAA 299 Query: 299 YL 300 + Sbjct: 300 QV 301 >UniRef50_D0D0K4 Transcriptional regulator n=1 Tax=Citreicella sp. SE45 RepID=D0D0K4_9RHOB Length = 300 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 76/291 (26%), Positives = 136/291 (46%), Gaps = 4/291 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + Q+R F+ VA G++ GA++ L +SQ A++++I+ELE L QLF R +G+ +T Sbjct: 1 MAFTLRQLRYFLAVAESGTVSGAAQALAISQSAVTEAIRELEADLGVQLFERHPRGLDIT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 G F +HA+ IL + A+ + + +L G++++G+ + ++ ++ ++SRF + +P Sbjct: 61 QKGHQFLRHATGILGSVSDARLSLSKDPDRLRGKLHVGVTSLVAGYVLSDILSRFRRANP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 V+V +E + + L GELD + E + + ++ GH Sbjct: 121 GVEVTALEDSGEYLEHLLIGGELDAAVMVTTNMRDRMALQTEIIDTSPYQLWLPNGHELS 180 Query: 183 GA--RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 SI+ L+D M + LL P+V + A SLVA Sbjct: 181 TRTSVSIEDLVDEPIIMLRVD-EIEEATRRLLSAFGARPRVAFRTRSVEAVRSLVATGAG 239 Query: 241 LSKLPEEMGCD-PLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLI 290 ++ LPE + L G +V VS LP ++ R+ + +P T I Sbjct: 240 IAILPELVYRRWSLEGDRIVSRDVSGSLPVVQVGVVWRKGAPLSPATREFI 290 >UniRef50_C3KNJ1 Putative transcriptional regulator, LysR-type n=1 Tax=Rhizobium sp. NGR234 RepID=C3KNJ1_RHISN Length = 303 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 101/292 (34%), Positives = 152/292 (52%), Gaps = 1/292 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ I+AF+ VA GSIR A+ LN+SQPALSK+IQELEE L+A L+ R + G T+ Sbjct: 2 IQLRHIKAFLAVADTGSIRTAALRLNVSQPALSKTIQELEEILSAPLYTRSAHGSMPTEF 61 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +F A +I E AQE+I Q G G++ +G+ A S + + RF +++P V Sbjct: 62 GRAFLHRARIIDTEFSRAQEEISQMVGAKGGKVAVGLSAIASMLMASQALERFWKKNPNV 121 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 VRI +G L ++ +RQGE DF + H+ T E L E + R GHP A Sbjct: 122 NVRISDGLLDRLVGGVRQGEFDFAVGGVPPSSLGHDLTIEPLFENRIVPVVRVGHPLADA 181 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQ-TPQVGVVCETFSACISLVAKSDFLSK 243 RS+K L +W ++ +++ D P+V + CE+FSA + ++ +D ++ Sbjct: 182 RSLKDLARANWLYTNDQPAFMALMNQHFVDHGVPPPRVLLTCESFSAVLDILPSTDLVAA 241 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 LP PL +V L + L+ R TPL ASL FR+ Sbjct: 242 LPRSCLTHPLVRARMVGLALDGGGSHTMVGLVTRAGVPLTPLAASLAKAFRQ 293 >UniRef50_B1YXM2 Transcriptional regulator, LysR family n=3 Tax=Burkholderia cepacia complex RepID=B1YXM2_BURA4 Length = 302 Score = 250 bits (639), Expect = 6e-65, Method: Composition-based stats. Identities = 65/294 (22%), Positives = 123/294 (41%), Gaps = 3/294 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + AF EVAR GSI + L++SQPA+++ ++ELE+ L LF R +GV LT+ Sbjct: 1 MNFTHLLAFYEVARAGSISAGAERLHVSQPAVTREVRELEDRLGIVLFDRMPRGVALTEG 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ Y++AS I A++++ + G +G + IG ++ +P I+ F+ +HP+V Sbjct: 61 GKLLYEYASRIFTLADTAEKELAELAGLGSGHMKIGASGTLGVFFVPEAIAAFNARHPRV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG- 183 + + + L L FTI D ++ + A+ GHP G Sbjct: 121 AIDLTVTNTERVEAGLHD--LSFTIGFIEGPFDDSILHARRIGSDEIAVVAAAGHPLAGT 178 Query: 184 ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSK 243 + L+D + M P + E + + A ++ L+ Sbjct: 179 KVRARDLVDRTVIMREPGSGTRAIIEESYRRAGLEIEPLMSVSHTEAIKRMLLSQHALAY 238 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 + D L L ++ V ++ +++ + +P + +L Sbjct: 239 ISTLSVADELRRGELAIVEVEDMRIVRPLHMVWAKGRSLSPSSQALFDLVASGA 292 >UniRef50_Q7WNE4 LysR-family transcriptional regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WNE4_BORBR Length = 293 Score = 250 bits (639), Expect = 6e-65, Method: Composition-based stats. Identities = 68/296 (22%), Positives = 128/296 (43%), Gaps = 10/296 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + Q++ FV +A + R A+ L++SQP LS +I+ LEE L LF R +K V LT A Sbjct: 1 MDLRQLKYFVALAEELHFRRAAARLSISQPPLSHAIKLLEEELGTALFERTTKSVALTSA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++FY A +L +L+ A R+ G + IG + +P ++ + Q++P+V Sbjct: 61 GQAFYPEALKVLAQLQVACAVTREVGAGKRGHLRIGFVGGMLLRGLPEIVRDYAQRNPEV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 V + E + +G+L + G E + + ++ F H G Sbjct: 121 IVTLHETSSAEQAKAIARGQLSAGF--LHAGLLAPELEGQVIRDEPFVACVPRDHRLAGR 178 Query: 185 R--SIKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 R ++QL + YY + L D +P++ + + L+++ Sbjct: 179 RVIDVRQLAGEDMVLFARDVSPGYYDSVIALCMDAGFSPRIRHEVAHWLTALLLISRGGG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQ-FRR 295 ++ +P+ L G+ L + ++ + +RD+ PL + RR Sbjct: 239 VALVPDPFVDAGL--DGVRYLRLKACDSRSYAHFAWKRDAS-DPLLREFVAFALRR 291 >UniRef50_A9BN68 Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BN68_DELAS Length = 342 Score = 250 bits (639), Expect = 6e-65, Method: Composition-based stats. Identities = 82/300 (27%), Positives = 140/300 (46%), Gaps = 3/300 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K+HQ+R V VA GS+R ASR L ++Q A++++++ELEEG LF R+S G+ LT A Sbjct: 25 MKLHQMRYLVAVAGCGSVRAASRALGITQSAITQALRELEEGHRLALFERQSSGIVLTPA 84 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQ-LAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 G + +HA LI ++ A++++ + + ++++G+ + +SL+P V+ F + PQ Sbjct: 85 GRTLLRHAQLITGQMAQAEDEMARLRDTCAVARLSVGVTPWVGQSLLPHVLRAFRAELPQ 144 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V++ + EG LR+G LD I GP + L + R GHP G Sbjct: 145 VRLELFEGLSAVAHPRLREGTLDLLIGRVPSGPSGGDLHGTPLFRYDATVVARTGHPLAG 204 Query: 184 ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVV--CETFSACISLVAKSDFL 241 ARS+ +L+D W + + L VG + + S + L+ SD L Sbjct: 205 ARSLAELMDCDWLLNYTPPEEDDLVRRLFLRHGLPVPVGHIHLVHSASLLLHLIVHSDML 264 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQ 301 S P + + LV L + E ++QR + + + + Sbjct: 265 SLCPWPLIESGVPQGTLVPLSLREQFEPHTVGVVQRGHGPLPWVAERFVHHLMEQVHACR 324 >UniRef50_A6UGP0 Transcriptional regulator, LysR family n=2 Tax=Sinorhizobium RepID=A6UGP0_SINMW Length = 298 Score = 249 bits (638), Expect = 6e-65, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 124/293 (42%), Gaps = 5/293 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 V + Q++AF+ VA G A+ L ++Q A+S I++LE L +LF R ++ V+LT Sbjct: 1 MNVTLRQLQAFIAVAELGRFHLAADHLGLTQSAISILIRDLEAVLKHRLFDRHTRMVSLT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 AG F A I+ +L A ++ + G++ I ++ +L+P VI+RF +++P Sbjct: 61 TAGAEFLPQARKIMSDLEIAVTNVHELANLQRGRVTIAAAIVLAATLLPPVIARFVKRYP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 ++V++ + + + L++ E D I T D E L+ Q + CR H Sbjct: 121 DIQVQVRDMPEEEIRSALKRNEADLGIGTVSA--DDPEIQASVLMRDQLTLICRSDHRFA 178 Query: 183 GAR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 A S L + + L + + IS+VA+ Sbjct: 179 RAPQVSWANLAGEALIGLAKDNPLRGLVDHALIASGVEVKTRYEVRFSTTAISMVAEGLG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 ++ LPE + ++ + + + ++Q R +P A + Sbjct: 239 IAILPENS-RQLTTNVDVRIVDLVDPVISRNISILQYRQPMLSPAAAKMKEFL 290 >UniRef50_B9Z0M9 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=B9Z0M9_9NEIS Length = 316 Score = 249 bits (638), Expect = 7e-65, Method: Composition-based stats. Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 4/291 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I Q+RA + VA GS+ A+ ML++ QPA+S+ ++ LEE + A LF R G+ LT+ Sbjct: 1 MDIKQLRALIAVAETGSVTRAAEMLHVVQPAVSRQLRLLEEDIGAALFERGRYGMELTEQ 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE ++ L EL A+ +I+ + G + IG+ S + L +++ +P V Sbjct: 61 GEILAEYTRRALRELDRARAEIQPTSATIQGIVTIGLLPSTADLLASPLLTTVSSLYPGV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++RI G + N L GE+D + Y LLE+ + Sbjct: 121 RLRISIGFAGHLQNWLESGEVDAAL--LYDPKPSPMLNVSPLLEENLWVVGPASSNFAAE 178 Query: 185 R--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 R S+ +L +P+ + + Q +V V S +LV L+ Sbjct: 179 RPVSLAELAGVPLILPSAPHALRTLVEHAFALAKQEVKVVVETNAMSVQRNLVLAGHGLT 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 LP D + L P++ + L R T + ++ Sbjct: 239 ILPSIAVADDIARGLLKAAPLTSPELQRKIVLALPNTRRVTLAVSCVVKAL 289 >UniRef50_A9I810 Transcriptional regulator, LysR-family n=5 Tax=Proteobacteria RepID=A9I810_BORPD Length = 329 Score = 249 bits (637), Expect = 9e-65, Method: Composition-based stats. Identities = 68/300 (22%), Positives = 127/300 (42%), Gaps = 12/300 (4%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 A +++ +R F+ VA + A+ L++SQP LS +I++LE L +L R S+ V L Sbjct: 30 AMELEPRLLRYFIAVAEERHFSRAAARLHLSQPPLSYAIRQLESTLGTRLLERTSRHVEL 89 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T+AG Y+ A +L + A +++ L G++ IG S+ +P +++ Sbjct: 90 TEAGRVLYREAQALLRQSEAIGTLVQRVGAGLRGRLRIGFVGSMLYRGLPDLLAAMRTAL 149 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P V+ + E I +R+GE D + P E L+ + F + HP Sbjct: 150 PDVEHVLTELNSHEQIEAVRRGEQDLGF--IHANPAPAEVQTLNLVAEPFVLCVPDTHPL 207 Query: 182 IGAR--SIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAK 237 R S++ L + + SY++ + L P + + + +LV++ Sbjct: 208 ARRRRVSLQALAHDDFILFARAASPSYHETVLSLCVTAGFHPAIRHEVRHWLSVAALVSQ 267 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYY-LIQRRDSRQTPLTASLITQFRRE 296 +S +P + L G ++ P + I RD+ PL + + R + Sbjct: 268 GLGVSIVPACLARSGLAGTRF----IAFDHPARSVSQAIWPRDTD-APLLRTAVDLVRAQ 322 >UniRef50_B1K332 Transcriptional regulator, LysR family n=6 Tax=Burkholderia RepID=B1K332_BURCC Length = 302 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 73/294 (24%), Positives = 117/294 (39%), Gaps = 8/294 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+R F+ VA +G A+ L++ QP LS+ IQELE L LF R+ +G LT Sbjct: 1 MELRQLRYFLAVADEGQFTRAAARLHIQQPPLSQQIQELEHELGFALFVRQPRGAVLTAP 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLM-PAVISRFHQQHPQ 123 GE F A +L EL A R+ G + + + +S + + P I F +P Sbjct: 61 GEIFAARARTVLLELNNAVVHARRVAQGRIGTVRVALTSSAAFHPLTPTAIRNFRDMYPG 120 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 + + + E +I + G D I + FE L E++ + GH IG Sbjct: 121 ISIEMSEVNAAEIIEMMLNGRADAAILRKPV-ETSADLRFELLAEERMLLVLPVGHRLIG 179 Query: 184 --ARSIKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 + S+KQL + S+ Y + P V I+LVA Sbjct: 180 GRSVSLKQLANESFIFVRRPGAPGMYADFIRACQAKGFEPHVVEEVPRMVTAINLVAAGG 239 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 +S +P M + + +A +L+ R D Q P + Sbjct: 240 GVSLVPASMQRYRQESVRYCRVA-GDHAFRAPLHLVTRHD-LQNPAASHFREAL 291 >UniRef50_C9RA29 Transcriptional regulator, LysR family n=1 Tax=Ammonifex degensii KC4 RepID=C9RA29_AMMDK Length = 295 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 62/293 (21%), Positives = 118/293 (40%), Gaps = 7/293 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K+ ++ FV +A +GS A++ L+++QPA+SK I LE L +L R + VTLT+A Sbjct: 1 MKLSWLKTFVLIADKGSFSLAAKELDLTQPAVSKHIALLEAHLGVKLIDRDQRQVTLTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++ +A I++ L A++ +R + G +NIG ++P +I RF +++PQV Sbjct: 61 GQALLPYARTIIKTLEEAEQAVRNLSASVRGTLNIGASTIPGHYVLPQLIRRFRERYPQV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V + + ++ + ++ + P + + HP G Sbjct: 121 QVNLEIADTEKVWQQVLEHKI--CLGAVGAPPSSPALEAVPFATDEIVLVLPTPHPLAGK 178 Query: 185 RSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTP---QVGVVCETFSACISLVAKSD 239 I + L + + E L + P +V T A ++ V Sbjct: 179 EVIPLELLPQLELVGREKGSGTRQTVEERLRQKGFPPERLRVVAEFSTTEAVLAAVEAGL 238 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQ 292 + + H L + + I + YL+ R L + Sbjct: 239 GGAFVSRWAAESRRHKGNLCICRLEGISFERKLYLVYSRHRTLPHLARLFLNF 291 >UniRef50_Q13T34 Transcriptional regulator, LysR family n=60 Tax=Proteobacteria RepID=Q13T34_BURXL Length = 334 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 111/294 (37%), Gaps = 6/294 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 V++ +R FVEV RQ S A+ + ++QP +SK ++ LE+ + + L R + + LTDA Sbjct: 15 VELRALRYFVEVVRQQSFTVAAEQMFVTQPTISKMVKSLEDEIGSPLLLRDGRQMVLTDA 74 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G YQ +L Q ++ GQ+ IG+ + SL I+ F Q++P++ Sbjct: 75 GRIVYQRGQDVLAAHAQLQAELNDLDTLGRGQLTIGIPP-MGGSLFTPAIAAFRQRYPKI 133 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA--I 182 ++++ E ++ L GEL+ Q + + + R G + Sbjct: 134 ELKLFEQGSRAIEAALINGELELG--GVLQPVDPENIEVLPVTRQLLWLVARTGSNWDDL 191 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + QL + + + + P + + +LV ++ Sbjct: 192 HEVPLAQLANEPFVFYGESLALNDVVLNACRTAGFAPTIVGRSGHWDFMAALVLAGVGIA 251 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 LP L PV E + RR+ + + + R Sbjct: 252 LLPAPYCRR-LDPAKFTCRPVIEPEIPWEMAIGWRRNGYLSHAARAWLDVAREA 304 >UniRef50_B2T4Q8 Transcriptional regulator, LysR family n=3 Tax=Burkholderia RepID=B2T4Q8_BURPP Length = 310 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 100/296 (33%), Positives = 150/296 (50%), Gaps = 1/296 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K +Q+RA V +A+ GSIR A++ + +SQPAL+K+I+E E+ L L R ++G LT Sbjct: 1 MKYNQLRALVAIAQHGSIRAAAKTVCLSQPALTKAIREFEQELGVPLVTRSARGAQLTQY 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++ Y A LIL E++ A++D+ GQ G ++ + +S + I F Q+ P+ Sbjct: 61 GQAVYTRAKLILAEMQHAKDDVVLLSGQEGGTVSCAVTPLVSLKYLSRAIHTFRQRMPKT 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + EG L + + LR G LDF I + EF F LLE + I R HP A Sbjct: 121 RLSVQEGFLTAALARLRDGSLDFVIAIVDEKKLAPEFMFRSLLECELIISARKAHPLANA 180 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAKSDFLSK 243 RSI L W + T S + L + T P+V V C +FSA SL S+ LS Sbjct: 181 RSIADLEGADWMLNTTPESIGQSLQDFFVQHGATAPRVVVECSSFSASFSLSVNSNLLSC 240 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 P+ + +V +PV E LP+ + +I RRD+ T LI F Sbjct: 241 CPKSFLETDWIRERIVSVPVRETLPRVSVGIISRRDALNTSACDYLIDCFVEAVAS 296 >UniRef50_A6F002 Transcriptional regulator, LysR family protein n=1 Tax=Marinobacter algicola DG893 RepID=A6F002_9ALTE Length = 299 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 77/297 (25%), Positives = 121/297 (40%), Gaps = 5/297 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + +H +R F VA Q S A+ +++SQPA+S++++ELEE L L RR V LT+A Sbjct: 1 MNLHLLRTFASVAEQRSFSRAAEAIHISQPAVSRAVRELEEQLGMALLERRGGQVRLTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G YQHA I ++A D+R RQG G + IG +I +P VI+ F +Q P + Sbjct: 61 GAELYQHARAIFALEQSAMADLRGRQGLERGSLTIGASRTIGTYFLPPVIAEFLRQFPAI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 VRI+ + L ELD D E + I HP + Sbjct: 121 DVRIISENTELIQRRLLAYELDIAF--IEGSVEDSRVEEVFWHEDELVILAHSDHPLLNR 178 Query: 185 RSIK--QLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 +S+K L W + LL + A + VA L+ Sbjct: 179 KSLKASDLDAERWVLREQGSGTRSVTLALLKQAGVKVDRTIEVGGNGALVQSVAAGLGLA 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 + + L + +L + K + I+ R+ ++P +L+ R Sbjct: 239 MVSSVAAREHLSVGKVNVLNFPD-RFKRPLHRIRLRNKPESPAAQALVAVADRVAST 294 >UniRef50_B4SNU6 Transcriptional regulator, LysR family n=1 Tax=Stenotrophomonas maltophilia R551-3 RepID=B4SNU6_STRM5 Length = 310 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 72/282 (25%), Positives = 123/282 (43%), Gaps = 8/282 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R FV A+ S A+ L+++QP L + I+ LEE + LF R+ +G+ L+DA Sbjct: 1 MELRHLRYFVMTAQLQSFTKAAEALHIAQPPLGQQIRALEEEIGTPLFHRQGRGIVLSDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRS-LMPAVISRFHQQHPQ 123 G F+ A IL + A+E G + +G+ S S + + A++ RF Q HP Sbjct: 61 GRVFWAAAVDILARVDHAKEQALSAARGEVGTLTLGLTESASYNDAVTALLRRFRQAHPA 120 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V+++++E S+I L GELD I + E ++L + HP G Sbjct: 121 VQLQLVEDGSESLIRRLDDGELDAVIVR-PPYSHPGELVIQQLSAEPLVAVLPAEHPLAG 179 Query: 184 ARSIK--QLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 I +L D + + + + Q TP + ++ I+L A Sbjct: 180 RAGIALTELRDERFILFSRKSGYGLSADVVAACRSQGFTPTIQQEAPQVASAINLAAAGL 239 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSR 281 ++ +P M LH GL + + +P A L R Sbjct: 240 GIAIVPASM--QTLHRPGLAFVALELGMPITALQLAMRGQHP 279 >UniRef50_Q46SX0 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=Q46SX0_RALEJ Length = 300 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 122/294 (41%), Gaps = 6/294 (2%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 + ++AFV +A +GS R A+ L++SQPALS+ I++LE L ++L R ++ V + Sbjct: 3 RINFGLEDLQAFVAIAEKGSFRMAAEALHISQPALSRRIEKLEMTLGSRLLERTTRRVDM 62 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T G F + A L+ L +A + G G + + S + +P I RF +H Sbjct: 63 THIGRQFLEEARAALDILDSAVLRLGDEVGLQRGLVTVAAIPSAALHFLPDAICRFGNRH 122 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P V+VR+++ +++ + GE DF +N G + F + + + + R HP Sbjct: 123 PGVRVRVIDENANAVLASVLSGESDFGLNFM--GGQEPNIEFRAIRAEPYRLALRRDHPW 180 Query: 182 IGAR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 G + ++L + + + + P + ++LV Sbjct: 181 AGRDCIAWEELAGQRMVSVSKQSGNRALIENAIAHLTRRPTIHYEANHVVGVLALVEAGL 240 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 ++ LP L + + E LI+RRD P +L Sbjct: 241 GMAVLPGMSLPRD--HPRLCGIELVEPSVDRVLALIRRRDRPLQPAAEALYEIL 292 >UniRef50_Q3JWC0 LysR family regulatory protein n=26 Tax=Burkholderia RepID=Q3JWC0_BURP1 Length = 322 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 58/292 (19%), Positives = 123/292 (42%), Gaps = 8/292 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + ++R F+ VA + A++ L+++QP L++ I LE L +LF R ++ V LT Sbjct: 17 IDLRRLRYFIVVAEELHFGKAAQRLHLAQPPLTRHISALEGELGLRLFDRSTRSVKLTAE 76 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISR-SLMPAVISRFHQQHPQ 123 GE F HA +L+ + A+ ++ G++ +G +S+ +I F + P Sbjct: 77 GELFLPHARDVLDAVHRAEIASQRAALGKEGKVALGYTSSVPLCDAFGTLIRNFARSFPD 136 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 +++ ++E +++G LD I + + + + Sbjct: 137 IELSLVEASSAQQGRSIKEGLLDIGIGWKNSFEDYEGCRVKTIAAEPLVVAVSQERALAS 196 Query: 184 ARSIK--QLLDYSWTMPTPHGS--YYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 S+ QL D ++ + P ++ +L TP+ G + I+LVA Sbjct: 197 EASLAVEQLADETFVLFPPGYGSTLDRKAFDLCATAGFTPRRGPSASQMTTMIALVAAGR 256 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLIT 291 ++ +PE + L G+ +P+++ L+ R ++ + S + Sbjct: 257 GVAIVPEAV--STLRKPGVAYVPLTDESALIELVLMWR-EAGLSLAARSFVE 305 >UniRef50_A1K6J7 LysR-family transcriptional regulator n=5 Tax=Proteobacteria RepID=A1K6J7_AZOSB Length = 303 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 70/298 (23%), Positives = 121/298 (40%), Gaps = 11/298 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + I Q+R F+ VA + +I A+ L+MSQP L++ IQ+LEE L QLF R +G+ LT A Sbjct: 1 MDIRQLRYFIAVAEEANIGRAATRLHMSQPPLTRQIQQLEEELDTQLFVRTPRGMELTQA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G F A I + A E ++ G++++ + S +P +I F ++P V Sbjct: 61 GTLFLAEARNIRALIEQATERTQRAGQGKLGRLDVAIFGSAILDRIPKLILNFRNEYPDV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 V + I+ LRQ + N + E + + + P Sbjct: 121 NVVLHTMTKAEQISALRQNRITVGFNRMLAPL--PDIRSEVIATESLLLAVNLNDPLAAQ 178 Query: 185 RSI--KQLLDYSWTMPTPHGSYY--KQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 ++ L + ++ L + + P+V ++LVA Sbjct: 179 PALPFDVLARRPVILFPSGARPNFVDKVLALCEARGFLPEVAQEVGDAVTGVALVASGFG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYL--IQRRDSRQTPLTASLITQFRRE 296 + +PE L G+V LP + +A L I R D +P+ ++ + R Sbjct: 239 VCMVPESATT--LQYPGVVYLPFEDAPAEARVDLSCIYRADDH-SPILSTFLASIRAT 293 >UniRef50_Q46S95 Transcriptional regulator, LysR family n=2 Tax=Burkholderiaceae RepID=Q46S95_RALEJ Length = 309 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 66/291 (22%), Positives = 122/291 (41%), Gaps = 8/291 (2%) Query: 6 KIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAG 65 ++Q+R F+ V + A+ L M+Q LS+ I+ LEE L +LF R S+ V LT AG Sbjct: 4 DLNQLRCFIAVGEELHFGRAATRLFMTQSPLSRQIRMLEESLGVRLFDRNSRVVRLTAAG 63 Query: 66 ESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVK 125 + A +L A + R+ ++G++ +G A L+P +I+R Q+ P+++ Sbjct: 64 SALLDDARRLLALAGHAVDVARRIDKGVSGKVRVGFTAVAGYELVPNLIARAMQELPEIE 123 Query: 126 VRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGAR 185 V + E V+ I L+ G +D D E + + + + H Sbjct: 124 VTLHEMVTVAQIEALQAGTIDLGFLR-PLPDVDPELQWRPAVSEPLLLAMHATHALAARE 182 Query: 186 SIK--QLLDYSWTMPTPHGS--YYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 I L ++ + ++ + +L + P+V + ++LV L Sbjct: 183 RIAAEDLAGQTFIQYSATEGKYFHDLIGSVLAGAGRPPRVVQQMSQTHSVLALVRAGLGL 242 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQ 292 + +P LH G+V+ P+ +A L+ R D+ + P Sbjct: 243 ALVPASA--RHLHFPGVVLRPIWRDDVRAELRLVWR-DANRNPACRVFADF 290 >UniRef50_A6ULR6 Transcriptional regulator, LysR family n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6ULR6_SINMW Length = 307 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 68/296 (22%), Positives = 122/296 (41%), Gaps = 3/296 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ ++ F +A G I A+ L +QPALSKS++ +E + +L + +GV LT A Sbjct: 1 MELRDLQYFEVIATTGHIGRAAEKLGRTQPALSKSVRRIESEIGTKLLVKSGRGVALTTA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + A + + ++ G + +G GA+ + L+P V SR ++ P + Sbjct: 61 GRVMLERARSLRMSVEQNLREMADIAKGAVGNVRVGSGATTAEYLLPLVCSRILREAPGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 K I G + L G++D + +G + +T +L E + GHP Sbjct: 121 KFEISIGMNDVLRTALNDGKVDIVVGPVTKG-DESNYTVHRLGEDSVVVAAARGHPLTRK 179 Query: 185 R-SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQ-TPQVGVVCETFSACISLVAKSDFLS 242 + +I L DY W +P + + + P V + S L+A +D L+ Sbjct: 180 KATIADLQDYGWVLPARSVVTRQWIDAAFASRDLSEPDVAIQTNNISLSPRLIAPTDLLT 239 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 + G+ LV + + E + R S P I ++E G Sbjct: 240 FISRRNLGRGRVGEPLVEISLPETTMHREVVAVHRNSSYMPPAVERFIAILKQEAG 295 >UniRef50_Q12DG5 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q12DG5_POLSJ Length = 289 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 122/292 (41%), Gaps = 9/292 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + Q+ FV VA + S A+ +++SQP LS+ I +LE+ L A L R S V LT A Sbjct: 1 MDLRQLSYFVAVAEELSFSRAASRVHISQPPLSRQIAKLEQELGAVLLIRSSHEVALTQA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++ + A +L E + + G + IG S + +PA++S++ Q +P V Sbjct: 61 GQALLEEARRLLALAAGIPEVVGRASRGETGSLRIGFVGSTIYTSVPALLSQYRQIYPHV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 V + + + L+ E+D I Q + L ++ F H G Sbjct: 121 AVSVQQLTVARQTVMLKNSEIDVGIIR--QAVTEPWLATRSLFKEGFMAALPVHHRLAGQ 178 Query: 185 RS--IKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 ++ L + + + + ++QL ++ + +P++ S + LVA Sbjct: 179 DRVMLQSLAEDDFVFFSRSEAPAIHEQLRKMCEAAGFSPRIVQEAYPMSTVVGLVAAGVG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQ 292 ++ +PE M L Q ++ + K ++L + + + Sbjct: 239 IAIVPESM--QRLQMQNVLYRALRGTRAKTEFFLAWHVGNT-SQTLRGFLDM 287 >UniRef50_Q0RXH6 Transcriptional regulator, LysR family protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RXH6_RHOSR Length = 290 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 112/292 (38%), Gaps = 7/292 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++I ++ F+ VA A++ LNM+QP LS+ I+ LE+ L +LF R S+ VTLT+ Sbjct: 1 MEIRHLKYFLAVAEHLHYGRAAKSLNMAQPPLSQQIRRLEKILQMELFDRSSRRVTLTNE 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ + A ++ + + + + AGQ+ IG AS + + +F +P+ Sbjct: 61 GQFLLEAAREVVGQSDHFENLAKALRMGEAGQLRIGFAASAMNWGLGTKLRQFRTAYPEA 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG- 183 V + + L+ +D G L E+ HP G Sbjct: 121 DVIAHQMSVADQATALQDDRIDLAFTV--GGLNYENLQVVDLDEEPLRAVIPSDHPLAGM 178 Query: 184 -ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + L ++ ++ TP++ + +V+ L Sbjct: 179 ETVRLADLSHETFVGYRFDDHLEDIIASACYRAGFTPKISFQGAQSHTLLHMVSAGFGLG 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 LP + G+V + + +P ++ R R TPL ++ + Sbjct: 239 LLP--ACDARMGADGVVFIDLEPPVPTMRISVV-RHWRRLTPLAERMLELVK 287 >UniRef50_C4K9T0 Transcriptional regulator, LysR family n=1 Tax=Thauera sp. MZ1T RepID=C4K9T0_THASP Length = 309 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 117/294 (39%), Gaps = 8/294 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R F+ VA + + A+ L++ QP LS I++LEE + +LF R + V L+ A Sbjct: 2 MELRHLRYFIAVAEELNFTRAATRLHIGQPPLSMQIRDLEEEIGVRLFERGPRRVALSTA 61 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRS-LMPAVISRFHQQHPQ 123 GE F HA IL+ + A + R+ G++ +G +S+ + L+P ++ + ++ PQ Sbjct: 62 GERFLLHARRILDGVEEAVAEARRAARGELGELRVGFTSSLPFTDLLPDALNAYRRRFPQ 121 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 V++++ E L GELD G ++ + H G Sbjct: 122 VRLQLREMFTPEQFQALVSGELDVGFVRLQAGTPPAGIVLREVARNPLRLVVNAAHRLAG 181 Query: 184 ARS--IKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSD 239 A + +L + L L P++ + I LVA Sbjct: 182 AAQVHLAELAGEDFISFPADVGTDLPGVLRALCRQAGFEPRIVQTAREATTQIGLVAAGL 241 Query: 240 FLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQF 293 ++ LP + + + + L ++E + L R P + Sbjct: 242 GVAVLPAPL--ESVRIARVRYLALAEPEAQFRLALAIREGEPV-PTLGGFLEVL 292 >UniRef50_C7NK10 Transcriptional regulator n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NK10_KYTSD Length = 300 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 61/300 (20%), Positives = 110/300 (36%), Gaps = 4/300 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + + V + + A+ +SQP LS +++LE L L R + LT A Sbjct: 1 MNLRDLEYLVALGDHRNFGRAAAACGVSQPTLSTQVKKLEAVLGCALVERAGRQTLLTPA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE A +L A Q + +G + +G+ +++ L+P V+ HQ P++ Sbjct: 61 GEQIAGRARRMLGHAEAIHRVAEQARDPRSGSLRLGIFPTLAPYLLPHVVPAVHQALPEL 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + ++E + ++ +LR+G LD + D E L + F + HP G Sbjct: 121 NLLLVEERTPDLMQQLREGTLDAVV--LAGPLTDPGLAVEPLFREDFLLAVPLDHPLAGQ 178 Query: 185 RSIKQ--LLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++ L D S + Q ++ G + +VA ++ Sbjct: 179 ETVDPSVLGDESVLLLEDGHCLRDQALDVCRSSGAVEMDGFRATSLETLRHMVASGVGVT 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQS 302 +P P G+ + + P L R S Q L L R L + Sbjct: 239 LMPRMAVDRPGGPGGVATVEFTAPAPHRDIVLAWRTSSVQDDLMPELADLLRSVPAPLAT 298 >UniRef50_Q0S956 Transcriptional regulator, LysR family protein n=3 Tax=Actinomycetales RepID=Q0S956_RHOSR Length = 299 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 64/300 (21%), Positives = 122/300 (40%), Gaps = 7/300 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+ FV VA + + A+ +++SQ +S I++LE L A L R S+ TLT A Sbjct: 1 MELRQLEYFVAVAEEANFTRAAERVHISQSGISAQIRQLEHDLGATLIDRSSRTATLTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+ HA L A ++ + + G++ +GM + + + +S FH HP + Sbjct: 61 GEAALVHARAALASADAMRQAVDDVNQLIRGRLVVGMVTACTVKPLFDALSAFHVAHPGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG- 183 ++ + E ++ +R G +D + P D ++ + PGHP G Sbjct: 121 EITLTEDSSDRLVERVRAGAIDLALVGTATAPPD-GLDAFPIISEGLVAAVPPGHPLAGR 179 Query: 184 -ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++ +L D++ + P + + A L + ++ Sbjct: 180 SRVTLAELGDHAIVCMPTGTGIRTVFDQACAAAGLRPDIALQASAPDAVADLAIRGLGVA 239 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQS 302 L E M D L + + ++ A L+ + S P L+ RR G + + Sbjct: 240 ILSESMATDY--RGRLTAVTLDDVDIPAVLALVWK--SLAGPALRELVLHTRRTFGEVPA 295 >UniRef50_UPI000174499E transcriptional regulatory protein, LysR family n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174499E Length = 302 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 68/297 (22%), Positives = 118/297 (39%), Gaps = 3/297 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + Q+RAF +AR+GS A R L+++Q A+S +I+ LEE L LF R+ K V LT Sbjct: 6 LDSRQLRAFTVLAREGSFTQAGRALHLTQSAISHAIRALEEDLGCMLFHRQGKRVLLTHH 65 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +HA I ++ A+ + GQI IG + S+ ++P V+ F P Sbjct: 66 GRELLRHAEEIQRQMALARASLGALDQNPRGQIRIGSTPAASQFILPTVLREFKDSFPLY 125 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + I+ G+ + L QG LD + + L E + P HP Sbjct: 126 SISIVPGETPDTLQRLEQGVLDLAVCL--RPRDVARVDCRPLFEDELIFLASPLHPWAQQ 183 Query: 185 -RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSK 243 K L ++ + + + S ++ + E P+ + A LV ++ Sbjct: 184 HPKTKDLAGETYIISSRNSSTFEMIGEYFLKLGVRPKSFIELGNTEAIKELVKLGLGVAM 243 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 + + LV LP+ K + + + + + +T + L Sbjct: 244 VAAWTAPAEIKSGELVSLPLVRSRIKRQWVVAHMKQKPVSLAEQTFMTLCEQVGEQL 300 >UniRef50_C7QF45 Transcriptional regulator, LysR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QF45_CATAD Length = 307 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 115/294 (39%), Gaps = 5/294 (1%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 Q+ +H++ F+ V G A++ L MSQP++S ++ LE+ L L R + T Sbjct: 3 QLNLHRLSIFLTVVETGGFSAAAQKLYMSQPSVSNHVRNLEQSLQTTLIDRSGPRIRPTA 62 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 GE ++A I A IR+ G +G++ +G ++ L+P +++RF ++H Sbjct: 63 EGEVLAEYARRIFLLTEEAVAAIREVSGVQSGRLEVGGTTTVGTYLLPRLLARFRERHQN 122 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 ++ I+ G ++ L GEL I P + E +L+++ + PGHP Sbjct: 123 IECDIVVGNNGQILKRLLDGELGLAIVA--GQPAAPQLKTETVLDERLLLVAAPGHPLTH 180 Query: 184 AR---SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 + QL + + P L + VA Sbjct: 181 PTPHITAPQLAGERFLLREPGSQTRDLQEAALINWDLDDMPKADMWGPETIKQSVAAGLG 240 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 +S + E + L +L V L + RRD +P + + R Sbjct: 241 ISLISEHAIDTEVKDGRLAVLEVDPPLRSRPVVIAYRRDRLLSPAERAFVALAR 294 >UniRef50_C8NJC1 LysR family transcriptional regulator n=9 Tax=Corynebacterium RepID=C8NJC1_COREF Length = 298 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 64/293 (21%), Positives = 113/293 (38%), Gaps = 5/293 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++I +R F+EVA G + + L ++QP LS+ + +E+ + LF R + + L Sbjct: 1 MRIDDLRLFIEVAESGHLTETADRLGIAQPTLSRRMARVEKHVGTPLFERAGRRLHLNPR 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++F HA I EL A +++ G I + S+ ++P +I F HP+V Sbjct: 61 GQAFLPHARRITAELDMAVTQVKRLMDPELGTIRLDFMHSLGTWMVPELIRTFRTDHPRV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA--I 182 + + +G ++ + D + D + LL ++ A+ GH Sbjct: 121 EFELHQGPANELVARVLDDAADLALVGPRPAEVDAGLGWAPLLRQRLALAVPEGHRLDGE 180 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 G +++ + P L L TP + + LV+ + Sbjct: 181 GPVELREAAGEPFVAMLPGFGTRLLLDALATASGITPDIVFESMELTTVSGLVSAGLGVG 240 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 LP MG L G+ + P+ E L+ R DS P R Sbjct: 241 VLP--MGDPHLPTVGVKLRPL-EPATHRELGLVWRADSGPAPAVEVFRDFVAR 290 >UniRef50_A9AT14 LysR family transcriptional regulator n=11 Tax=Burkholderia cepacia complex RepID=A9AT14_BURM1 Length = 300 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 62/300 (20%), Positives = 131/300 (43%), Gaps = 6/300 (2%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 +V+ ++ AFV VA G+ A+ L+++QP LS+ IQ+LE+ L +LF R ++ VTLT Sbjct: 1 MKVENSELEAFVAVAELGTFHRAAEKLHLTQPGLSRRIQKLEQALGVELFQRTTRSVTLT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 G F A + +L I++ + G++ + ++ L+P V+ ++ +++P Sbjct: 61 GVGRQFLPMAREQIAQLGMMLSSIQEIAEKRYGKVRVSSIPTVVAQLLPKVLLQYAEKYP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 + V+I++G +++++R G +F ++ D + FE L ++ + P Sbjct: 121 LIGVQILDGNHDFVLSQVRAGIAEFGVSL--HPGDDEDLLFEPLFPDRYVLAVHRDDPLA 178 Query: 183 GA--RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 A ++ +L + L L+ +A + E S +LVA Sbjct: 179 QADGVTLAELRHARLVIGGRDSGNRLLLEMLMGQEAVRLRWFYEVEHISCVAALVAAGVG 238 Query: 241 LSKLPEEMGC--DPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 + LP L + +P++ + +++ R + + + L + Sbjct: 239 CAILPRSAVDGVGMLASPDVRAVPITSPVISRTVGIVRHRAVSMSSMASDLCALVKAAAA 298 >UniRef50_Q2T4U0 Transcriptional regulator, LysR family n=2 Tax=Burkholderia RepID=Q2T4U0_BURTA Length = 299 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 56/300 (18%), Positives = 108/300 (36%), Gaps = 4/300 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + AF+ V GS+ GAS L++SQPAL++ I++LEE L LF RR +G++ T+A Sbjct: 1 MNFTHLSAFLAVVEAGSVTGASARLHVSQPALTREIRDLEERLGVVLFDRRPRGMSPTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +A I A+ + + G + G + + +I L+P V+ F ++P V Sbjct: 61 GRLLAGYAKRIFALTDEAEAALDEFSGLVRGNLKLAASRTIGSYLLPPVLDVFCDRYPGV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG- 183 + + E + L E F HP Sbjct: 121 TIDVAEMNTELVEAALLTYERQLGFV--EGAYDTTAFDSMVFGRDTLLAVAASSHPLARK 178 Query: 184 -ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 ++ + D P + + + + A L+ + + ++ Sbjct: 179 HRVGVQDIADCDVLSREPGSGTRNAVETAFAEHGLEFAPRLSVGSAEAMNRLLLRGNAIA 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQS 302 + L LV L V+++ + +I + + +P + + Sbjct: 239 WVSRFTIEAELEAGALVPLRVTDMTVERDLTIIWHKGATLSPSARIFRDLLVEQARARAA 298 >UniRef50_D2R7I4 Transcriptional regulator, LysR family n=6 Tax=Planctomycetaceae RepID=D2R7I4_9PLAN Length = 288 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 118/293 (40%), Gaps = 7/293 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+R F++VA++G+ A+ L +SQPALS+SIQ+LEE L +F R+++ V LTDA Sbjct: 1 MELDQLRYFLKVAQRGNFTRAAEELMISQPALSRSIQKLEEELGQPVFERKTRSVLLTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + +L L + +I G++ +G +I+ +P V+ RF + P+ Sbjct: 61 GTLLQARSQQVLTILEDTKSEITD--DGQCGRVRVGAIPTIAPYFLPEVLQRFSAKFPKA 118 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI-- 182 + + E +I RQGE+D I E E P H + Sbjct: 119 NLIVQENTTDVLIKSCRQGEIDLAILVLPVPAKYLEVEELFEEELLLV--LPPHHALVEK 176 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + + + + + + ++ P V + LV+ + +S Sbjct: 177 DKIRVADVEPFPFVLLDEAHCLSDNIVSFCRQRSFQPVVVERTSQLTMVQELVSLAHGIS 236 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRR 295 +P M Q V + P + Q+ L + RR Sbjct: 237 LIPA-MARQCDQSQRRVYRSFTGRKPTRTVAVAWNPYRFQSRLLVAFRECLRR 288 >UniRef50_D1XD48 Transcriptional regulator, LysR family n=2 Tax=Streptomyces RepID=D1XD48_9ACTO Length = 329 Score = 247 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 68/294 (23%), Positives = 119/294 (40%), Gaps = 8/294 (2%) Query: 9 QIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESF 68 ++ F VAR + A+ L + Q LS+++ LE+ L LF RR + V+LT AG +F Sbjct: 39 RLAYFEAVARHEHVTRAAHELGVPQSTLSRAMVRLEQDLGVALFARRGRTVSLTPAGRTF 98 Query: 69 YQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRI 128 L E+ A + +R AG++ G ++ +P++I F HP+V+ ++ Sbjct: 99 LGSVERALAEVEKAADSVRADADPTAGKVAFGFLHTMGSETVPSLIRAFRADHPRVRFQL 158 Query: 129 MEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGAR--S 186 ++ +MI LR G LD + P + +L E++ + H G R Sbjct: 159 VQNYGEAMIERLRAGGLDLCLT--SPVPDAPDLVARRLDEQRLRLVVPDDHRLAGRRRVR 216 Query: 187 IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSKLPE 246 + + + ++ P + +L + TP+V E LVA ++ LP Sbjct: 217 LAEAAEEAFVTLEPGYGLRRITDDLCTEAGFTPRVAFEGEEAETLRGLVAAGLGVALLPP 276 Query: 247 EMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 G+V L V+ + TP A+ G+L Sbjct: 277 PAVA----RPGVVELTVTAPRAVREIGVAWLDGHPDTPPVAAFKRFLLSRRGHL 326 >UniRef50_B8J696 Transcriptional regulator, LysR family n=3 Tax=Anaeromyxobacter RepID=B8J696_ANAD2 Length = 296 Score = 247 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 121/281 (43%), Gaps = 8/281 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R FV VA + A+ L ++QP LS+ I++LE L +LF R + V LT+ Sbjct: 1 MELRHLRYFVAVAEELHFGRAAARLGIAQPPLSQQIRQLERELGVELFLRARRRVELTEP 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G HA +L+ A ED+R+ G +++G+ AS + ++P V F +HP V Sbjct: 61 GRVLLGHARAVLQRASQAAEDVRRAARGETGALSVGVVASATYGVVPRVFRTFRARHPDV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 + + + + LR G+LD + D E +LE+ + GHP Sbjct: 121 ALGVAVMSTGAQVAALRAGQLDLGLART--PFGDETLVAETVLEEPVVVALPAGHPLSAR 178 Query: 185 RSIKQLLD--YSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 R+++ + + +Y + L + P+V + ++LVA Sbjct: 179 RALRLAALAPEPFVLFPRDRRPGWYDFVLGLCREAGFRPRVAEDAPELATAMALVAAGIG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSR 281 ++ +P + L G+ P++ + ++R Sbjct: 239 VTLVPASV--KDLRRSGVDYRPIAAPRARTRLVALRRPGEP 277 >UniRef50_A0QCY6 Transcriptional regulator, LysR family protein n=4 Tax=Corynebacterineae RepID=A0QCY6_MYCA1 Length = 294 Score = 247 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 62/280 (22%), Positives = 115/280 (41%), Gaps = 7/280 (2%) Query: 13 FVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHA 72 F+ +A + A+ L+++QP L++ + LE+ L LF R + ++L G FY+HA Sbjct: 9 FITLAELQHVTAAAEQLHVAQPTLTRMLARLEQRLGVALFDRHGRRLSLNTYGRIFYEHA 68 Query: 73 SLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQ 132 EL +A+ I G+I + +S +++P +I+RF + P+V + EG Sbjct: 69 RRAQLELDSARRAIADLADPAVGEIRLAYLSSFGSTVVPRLIARFKESSPRVTFTLEEGA 128 Query: 133 LVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG--ARSIKQL 190 S+ + +R G +D + P + + L ++ + GH A S+ L Sbjct: 129 AESIADRVRSGGVDIGVV--SPRPVERTLAWRSLFRQRLGVAVPDGHRFARGAAVSMVDL 186 Query: 191 LDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSKLPEEMGC 250 D + P + L EL P+V + + SLVA +S +P Sbjct: 187 ADEPFVTMHPGFGMRRLLDELCAAAQFRPRVALQAPNLTTAASLVAAGLGISLVP---ID 243 Query: 251 DPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLI 290 + G+ + P+++ +I I Sbjct: 244 GSSYPSGVSVKPLADADAYRDVGMIWDSGRPLPRSARDFI 283 >UniRef50_D2ATF2 LysR family transcriptional regulator n=2 Tax=Actinomycetales RepID=D2ATF2_STRRD Length = 297 Score = 247 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 69/295 (23%), Positives = 125/295 (42%), Gaps = 9/295 (3%) Query: 7 IHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGE 66 + Q+ AF +A + A+ L ++QP LS+ I+ LE + LF R VTLT AG Sbjct: 8 LQQLHAFAILAEELHFGRAAERLGIAQPPLSQQIRRLEVKVGHPLFTRGPGRVTLTPAGH 67 Query: 67 SFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKV 126 A L+E+ + R+ AG++ IG AS++ +L+P ++ + ++P V + Sbjct: 68 ELLPAARRALDEIAIGLDAARRTGNGEAGRLRIGFSASLALTLLPGLLRGYRDRYPGVDM 127 Query: 127 RIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGAR- 185 I E + LR+ +D + + P + E +L ++F HP G R Sbjct: 128 EIREMTTAPQVAALREHVIDIGL--LREPPDEPGLVTETILSEEFVAILPTAHPLAGQRV 185 Query: 186 -SIKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 SIK L D + + + + Q+ ++ P++G + +LV +S Sbjct: 186 VSIKALADEPFVLLPRSAGPTVHDQILDVCRSAGFEPRLGQHAVEWQTVSALVEAGLGVS 245 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 P + + +G+ + ++ + RRD R PL + R Sbjct: 246 LAPASI--RRIRLKGIAYRRIEPNTARSTVAMTWRRDDR-NPLVPRFLAAARNVA 297 >UniRef50_Q46Q42 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46Q42_RALEJ Length = 297 Score = 247 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 68/302 (22%), Positives = 127/302 (42%), Gaps = 7/302 (2%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + + +RAFV +A + A+R ++SQ A S +Q LEE ++LF R ++ V L+ Sbjct: 1 MNLSVKHLRAFVALATHRNFTRAARACHLSQSAFSALVQTLEEQAGSRLFERTTRHVELS 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 G F + A +L + AA ED+R + G+++I SI+ +P +++ F Q++P Sbjct: 61 ADGMRFEETARRLLGDFEAAFEDLRAHAERRKGRVSIAALPSIAGGDLPPLLAAFRQRYP 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 + + + + I+ +R+G DF + D + E L+ F + C H Sbjct: 121 GIALELFDQLADGCIDLVRRGRADFALA--PAPVQDDDLRVEPLVHDTFHLVCPTTHVLA 178 Query: 183 GARSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 R I + L + + S + L L + E + +LV Sbjct: 179 RKRRITPQMLAGQPFIHLSRTSSVRQHLDAAL--HPLKLSSVMEVEHLATVAALVQAGLG 236 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 +S +P + GL + P+ L++ RD + A++I G Sbjct: 237 VSVVP-SLALFQFQRDGLAVRPLQMPSLVRDICLVRLRDRGDSAAAAAMIDCLHVHYGRR 295 Query: 301 QS 302 ++ Sbjct: 296 RT 297 >UniRef50_B7RS97 Transcriptional regulator, LysR family n=1 Tax=Roseobacter sp. GAI101 RepID=B7RS97_9RHOB Length = 302 Score = 247 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 89/296 (30%), Positives = 150/296 (50%), Gaps = 1/296 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K +Q+R FV VA GS+R ASR L ++QPA+++SIQELE L AQLF R ++GV LT Sbjct: 1 MKFNQLRDFVAVAEAGSLRAASRRLELAQPAITRSIQELENSLGAQLFIRGARGVRLTPV 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G F A +LEE+R A E++ Q QG G + +G+ + ++ V+ F +++P+V Sbjct: 61 GMVFLVRARNVLEEVRRAGEEVSQIQGSAEGNLVVGLSIAGHMGVLERVLRPFIRRYPRV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ ++EG L ++ +EL G +DF I + E KL + + + R HP + Sbjct: 121 RLHVIEGFLPTLESELLAGTVDFFIGPVSEDIVTPELDVSKLFDNERLVIARRDHPRSAS 180 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGV-VCETFSACISLVAKSDFLSK 243 RS+ L D W + +LS + + P + C++ + ++ + +D L+ Sbjct: 181 RSLSDLNDVDWLTTSITHDAKDELSAVFAEHGLPPPRLIAKCQSALSILTFLMSTDMLAM 240 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 +P + PL L+ P+ E L+ R+ TP +T R+ Sbjct: 241 VPRQWVESPLMKDLLIPFPLKERFGAPPICLVHRKGLGLTPAAEHFVTLVRKASSA 296 >UniRef50_A9C046 Transcriptional regulator, LysR family n=2 Tax=cellular organisms RepID=A9C046_DELAS Length = 317 Score = 247 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 63/300 (21%), Positives = 120/300 (40%), Gaps = 10/300 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K H +R FV +A + A++ L ++QP LS +++ LE+ L A L R +K V LT A Sbjct: 16 MKTHLLRYFVALAEERHFGRAAQRLCITQPPLSMALKTLEQDLGASLMDRDAKNVRLTPA 75 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+F A +L +L+ A + +R + G++++G+ S+ +P F + P V Sbjct: 76 GEAFLVEARKVLAQLQHAADVVRGVAEGMQGRLDVGITGSMVYRQVPDFCRAFRAERPLV 135 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +V + E + + G++D P + E+ F H Sbjct: 136 EVCLHEMSTREQLQAIASGQIDCGFLNIASPPD--GLQTLSIGEEPFVCCLPATHALAQQ 193 Query: 185 R--SIKQLLDYSWTMPTPH--GSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 +++L ++ M + Y + L P + ++LV+ Sbjct: 194 PDIDLRELARDTFVMFAREVAPANYDNVIACLQQAGIHPHTRHAARQWLTVMALVSAEQG 253 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEI-LPKAAYYLIQRRDSRQTPLTASLITQFRRECGY 299 ++ +P M + G+V +P+ + R D L + I + R Sbjct: 254 VALVPSCM--QRVGMNGVVFVPLRGPQQAMTPAVMAWRADQP-AALLQAFIERVRAMAST 310 >UniRef50_A1W2B9 Transcriptional regulator, LysR family n=6 Tax=Comamonadaceae RepID=A1W2B9_ACISJ Length = 308 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 58/300 (19%), Positives = 118/300 (39%), Gaps = 6/300 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ Q+R F+ VA + ++ +L ++Q LS +++LE L LF R +G+ L+ A Sbjct: 1 MELRQLRYFLSVAETEHLTRSADVLFVTQSTLSHGLRQLEAELGVPLFDRLGRGLRLSQA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +F HA+ L+EL A ++ + G + +G+ + +P ++ F ++P V Sbjct: 61 GHAFRDHAARALQELEARRQAVADMSALQTGTLQVGVIPTFLTRFVPDAVAAFSARYPGV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + + + + L G LD I E E L E++ + GHP Sbjct: 121 QLTVRDLRSGQIEELLIAGRLDLGIAF--HPASREEIEAEPLFEERMHLVVHQGHPLARR 178 Query: 185 R--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + + +L + + + + TP V V E+ A + + Sbjct: 179 QRLRLAELAGVPLALLPASFATRRLIDAAFAQAGVTPLVRVEMESVDALLQACRSGPLAT 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQS 302 E G + ++E L+ RR + ++ + R + Sbjct: 239 IAAEHAALH--AGPDMRAAVLTEPRTVRRAGLLWRRGASRSAAAREFVALLRPAIARTAA 296 >UniRef50_UPI00004DBCAD UPI00004DBCAD related cluster n=2 Tax=Xenopus (Silurana) tropicalis RepID=UPI00004DBCAD Length = 312 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 72/301 (23%), Positives = 129/301 (42%), Gaps = 5/301 (1%) Query: 3 FQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLT 62 + + Q+ AFV+VA GS R A+ L SQPALS+ I++ E+ L A+LF R ++ V++T Sbjct: 1 IDLSLQQLEAFVQVAAAGSFRQAALRLGQSQPALSRFIRQAEQTLGARLFDRDTRHVSIT 60 Query: 63 DAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHP 122 DAG+ A +L + A D + +G+I + S S +L+P ++ F + H Sbjct: 61 DAGKELLPIAQRVLRDFDDALGDFGEFMAGHSGRIVVAALPSTSIALLPQALAAFSRTHS 120 Query: 123 QVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI 182 QV + E ++ + +G DF I+ + L + F + CR P Sbjct: 121 QVTFALTEAPAEVLLALVEEGRADFGISVRPAPRQ--RLQYRHLFDDPFVLVCRRDDPLA 178 Query: 183 GARS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 S + S + Q + + ++C +LVA Sbjct: 179 ARESVPWSAFSTRPCIVAGSRSSIRPVTDAVFLRQRMPVHPVLEYPSVASCGALVAAGVG 238 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 ++ LP + + L+ LV LP+ L ++ R +P++ + + ++ L Sbjct: 239 ITALP-MLALELLNMVELVALPLQRPLMSRPIGIVTRIGRSLSPVSKAFMASLTQQTCVL 297 Query: 301 Q 301 Q Sbjct: 298 Q 298 >UniRef50_B1J4U2 Transcriptional regulator, LysR family n=2 Tax=Pseudomonas putida RepID=B1J4U2_PSEPW Length = 311 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 74/293 (25%), Positives = 126/293 (43%), Gaps = 2/293 (0%) Query: 2 AFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTL 61 A++V + Q+ FV VA G A+ LN+SQ +S+ +++LE L L R +GVTL Sbjct: 7 AYRVDLKQLECFVRVAEFGGFTRAAATLNLSQSVVSRQVRQLELELGQHLLLRNGRGVTL 66 Query: 62 TDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQH 121 T AG ++H IL +++ A+ED+++++ L G++ IG+ SI+R +++ F + Sbjct: 67 TPAGTRLFEHGQGILRQVQVAREDLQEQRDSLTGKVVIGLPPSIARRHTVGIVTAFQKAF 126 Query: 122 PQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPA 181 P + I EG SM L G LDF + Y + + FE L + + G Sbjct: 127 PGCSLGIKEGLSHSMREWLLLGRLDFAL--LYNPAQNAQLHFEPLQSEPLWLIGAAGACL 184 Query: 182 IGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 A + L DY +P+ S + + V + + + I LVA Sbjct: 185 APAVPLATLGDYPLIIPSQPHSLRRLIESEAARHHVELNVHMEIDGIPSLIDLVAAGAGF 244 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 + L GL P+ E ++ T L + + + Sbjct: 245 AVLSRMALSGSYVPLGLQSAPIVEPTINTHLFVATTNQRPLTRLASMTLAVVK 297 >UniRef50_A1VNR0 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=A1VNR0_POLNA Length = 305 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 59/303 (19%), Positives = 123/303 (40%), Gaps = 6/303 (1%) Query: 1 MAFQV-KIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGV 59 M + + Q++ FVEVARQ S+ A+ L ++QPA+S I++LE+ L + + Sbjct: 1 MVMRPYTLKQMQTFVEVARQRSVSKAAERLFVTQPAVSMQIRQLEDAFGLPLIEPLGRNI 60 Query: 60 TLTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQ 119 LT AGE+F HA L + + + + + G G+I++ + ++ ++ +P ++ RF + Sbjct: 61 QLTHAGEAFLGHAIAALGQFKDLEALMAEHVGMKKGRIDLAVVST-AKYFVPMLLVRFRK 119 Query: 120 QHPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGH 179 HP + +++ +++ + + E D + G D E +I P H Sbjct: 120 LHPGIDIQLRIDNRENILGMMARYEADLVVMGRAPGNLDCE--ATPFATNPLSIVAAPDH 177 Query: 180 PAIGARSI--KQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAK 237 + +++ L ++ + + + L DQ V + + V Sbjct: 178 ALVRRKTLPFSALGEHGFVVREQGSGTRAAMERLFADQKTPLNVVMEMPSNETIKQAVMA 237 Query: 238 SDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 LS L L + ++ + +Y+ + +P + + Sbjct: 238 GMGLSFLSRRTMRHELAHGYIALVDIEGTPLVGNWYITHLSQKKLSPAALAFKEFLVEQG 297 Query: 298 GYL 300 G L Sbjct: 298 GAL 300 >UniRef50_Q12BP5 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q12BP5_POLSJ Length = 319 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 75/320 (23%), Positives = 127/320 (39%), Gaps = 27/320 (8%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ QIR F +A + S A+R L++SQP LS I LE L A+LF R S+ V L++A Sbjct: 1 MELRQIRYFTVLADELSFTRAARRLHVSQPPLSFQIASLEAELGARLFNRTSRSVALSEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G++F HA +L L A+ +++ L G++ +G+ S P I +F Q P V Sbjct: 61 GKAFLPHAQAVLARLEEARGHVQRVASGLQGRVQVGLAGSHFLGPFPQFIQQFRLQRPAV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG- 183 ++ + E + + LR G LD ++ D + + L + PGH Sbjct: 121 EIALHEMKPSDHLQALRDGRLDLCVSR--NPLEDAQISAALLWRDPVVVALPPGHRLAAR 178 Query: 184 -ARSIKQLLDYSWT-MPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 + +L D + + + +L E P + A ++LVA + Sbjct: 179 SRLRLAELKDEEFVFLRLDSSPFAARLFEACVQAGFAPHIAQQVVEVPAALNLVAAGLGV 238 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEI---------------------LPKAAYYLIQRRDS 280 + +P + G+ L S Y++ RR+ Sbjct: 239 ALVPASLAQLRADAVGICSLSPSMPKRAQAEGKAKMTGGLNGNAPGAINGDVYVLWRRED 298 Query: 281 RQTPLTASLITQFRRECGYL 300 P A+ TQ L Sbjct: 299 A-APAVATFRTQLLDWARAL 317 >UniRef50_B3EA60 Transcriptional regulator, LysR family n=2 Tax=Bacteria RepID=B3EA60_GEOLS Length = 302 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 67/302 (22%), Positives = 126/302 (41%), Gaps = 8/302 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R FV VA++ S A+ L ++QPALS I +LE+ + L R ++ V LT A Sbjct: 1 MELRHLRYFVNVAQELSFSRAAEKLLVAQPALSTQIADLEQEIGTPLLLRNTRSVQLTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G+ F A IL AA++ + GQ++IG ++ + +P +I R+ +P V Sbjct: 61 GKVFLIEAQAILAAADAAKDRALRTSRGQEGQLSIGFFSAPTMLFLPDLIRRYRAIYPNV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +R+ E + +GE+D P + E L ++ F HP Sbjct: 121 AIRMHELTPDRQLAAFSRGEIDIGFTR-PLPPGYPDLAGEVLFQEHFLAVMAETHPLGSR 179 Query: 185 RS--IKQLLDYSWTMPTP--HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF 240 +S + +L + + + + +P V + SA +++VA Sbjct: 180 QSIHLNELAQEPFVLLDRAVAVGLHDHIIAACLKAGFSPLVSTSPDLMSAVLTMVAAEQG 239 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL 300 +S +PE + L L +P+ L + + P + + R + + Sbjct: 240 VSIVPEGV--QNLRSNQLAFVPIIPALEPIPLIVCWHAKTDAPP-RDAFLQLIREQHAQV 296 Query: 301 QS 302 +S Sbjct: 297 KS 298 >UniRef50_B4DCH5 Transcriptional regulator, LysR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCH5_9BACT Length = 298 Score = 246 bits (630), Expect = 5e-64, Method: Composition-based stats. Identities = 76/296 (25%), Positives = 133/296 (44%), Gaps = 8/296 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 ++++Q++ F+EVARQ + A+ L+++Q ALS+ I++LE+ LA LF R + TLT A Sbjct: 1 MELYQLQYFLEVARQRNFTRAAARLHLAQAALSEQIRKLEDELATPLFQRGRRESTLTAA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE+ HA +LE AA+ +++ G +G++ IG S+S L+PA ++ F ++HPQV Sbjct: 61 GETLRGHAEALLERAAAARHAVQELVGLRSGKLVIGAIPSVSAGLLPAAVTAFRKRHPQV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI-- 182 ++ I EG ++ + G ++ + + F LL + F I P H Sbjct: 121 ELVIAEGTSEAVAEGVESGRVEMGVIQHPTPAGP--FDERTLLTEPFVILAGPHHAIARH 178 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 S+ L + + P++ +LVA ++ Sbjct: 179 RRVSLASLAGEPFVFFKGRA--RESALAACRAAGFEPRLACESGELETVRALVAAGLGVA 236 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECG 298 LPE ++ +SE + ++ RR +P A T R G Sbjct: 237 ILPELAAQR--ARPACALVRLSEPKVERKLVIVTRRGHAPSPAAAEFETLLRGARG 290 >UniRef50_Q39PG2 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q39PG2_BURS3 Length = 315 Score = 246 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 79/299 (26%), Positives = 133/299 (44%), Gaps = 1/299 (0%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +K+HQ+RA V VAR GSI A+R L+++QPA+++S+++LE+ L L R S GVTLTDA Sbjct: 1 MKLHQLRALVAVARSGSIHEAARTLHLTQPAVTRSLRDLEDELGLMLVARSSSGVTLTDA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + + A L++ E+ +E++ Q + G++ IGM +++PA +RF + P V Sbjct: 61 GRAMLRRAELVVNEVARTEEEMAQLRENRQGRLAIGMTPLAGITVLPAAYNRFRRAMPDV 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ +EG ++ +L+ G LDF + E L GA Sbjct: 121 QLEFVEGSPSQLVEQLKNGALDFALGAGADAQDFTSVRCEHLDSFPMWFAVSRKGKLAGA 180 Query: 185 RSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT-PQVGVVCETFSACISLVAKSDFLSK 243 S+ L D W P + L+EL P+ C + + +L SD ++ Sbjct: 181 TSLADLQDAEWLHTGPSTEFRAFLAELFAQAGLPAPRRVTRCASQTLFYALAVNSDVVTA 240 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQS 302 + L L + P YL+ R + T + ++ Sbjct: 241 WTQLALRGEDASDTLKTLDLVGQPPARNLYLLFRDSAVLTASAEYFVRCIDEAVQAERA 299 >UniRef50_C7I0K1 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I0K1_THIIN Length = 319 Score = 246 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 67/293 (22%), Positives = 122/293 (41%), Gaps = 5/293 (1%) Query: 6 KIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAG 65 I Q+R F AR A++ ++++ PA+S I+ELE + LF R+ K V+LT G Sbjct: 5 TIRQLRVFSAAARHLHFGKAAQEMHLTPPAVSMQIRELESQVGLPLFERQGKSVSLTLTG 64 Query: 66 ESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVK 125 E +A +L L+ A++ + + +G AG++ IGM ++ ++ +P +++RFH ++P V+ Sbjct: 65 EYLVVYARKVLATLKDAEDAMARLRGIKAGRLTIGMVST-AQYFVPRLLARFHAEYPHVE 123 Query: 126 VRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI--G 183 VR+ G +++ L+ ELD I + P D E I P HP G Sbjct: 124 VRLSVGNREQLVSHLQNSELDLAI--MGRPPRDVATRAEPFAAHPMGIIAPPQHPLSTGG 181 Query: 184 ARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSK 243 S L +++ + P E L + ++ V + +S Sbjct: 182 PHSATLLTQFNFIIREPGSGTRATFEEYLHQHQMELPLFTEMQSNETIKQAVMANMGISF 241 Query: 244 LPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 L L L + + + +Y + +P + Sbjct: 242 LSLHTIDLELRNNLLTVPSIEGMPLLRRWYAVNSLAKLLSPGAEAFRYFILEH 294 >UniRef50_A5FXN6 Transcriptional regulator, LysR family n=6 Tax=Alphaproteobacteria RepID=A5FXN6_ACICJ Length = 306 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 70/293 (23%), Positives = 117/293 (39%), Gaps = 9/293 (3%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 +++ +R FV VA S A+R L +SQP LS+ I++LE + L R S+ V+LT A Sbjct: 6 MELRHLRYFVAVAETLSFTEAARRLAISQPPLSQQIRDLELEIGTTLIARSSRNVSLTPA 65 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G +F A IL E A+++ R +G ++IGM ++ + +++ F P V Sbjct: 66 GAAFLTRARQILAEAVRARDEARVIGAGRSGTLDIGMTGAVLLGGLGGLVAAFQIFAPGV 125 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 +VR+ E L G LD D E + + HP Sbjct: 126 QVRLHEMPPGEQEAALGAGRLDLCF--LRTPGADPALRVEPAWHEGVSAVLPRDHPLAVR 183 Query: 185 RS--IKQLLDYSWTMPTP-HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFL 241 R + L D + + L + P++ A ++LVA + Sbjct: 184 RRLALADLRDEPFVFFRRADSRFADHLWTCCIEAGFAPRIVQEVVEAHAVMALVADGFGI 243 Query: 242 SKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFR 294 + LP+ L GL P++ +A L+ R+ + + I R Sbjct: 244 ALLPDSA--RRLAPSGLGFRPLAGNPARADVSLVYPREH--SAVVGEFIGFAR 292 >UniRef50_B4UKP3 Transcriptional regulator, LysR family n=4 Tax=Anaeromyxobacter RepID=B4UKP3_ANASK Length = 311 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 120/294 (40%), Gaps = 5/294 (1%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + + AFVEV RQG A+ L+++QPA+SK+++ LE+ + L R ++ T+A Sbjct: 1 MDLRGLGAFVEVVRQGGFTRAAAALHVTQPAVSKAVRALEDEIGVPLLERGARRTVPTEA 60 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 G + A +L +RA ++++ G+ +G+ +S + P V++ + Q++P + Sbjct: 61 GRAVLARAEGVLAAVRAIEDEVADLGALRRGRARVGLPPMVSGAFFPPVLAAYRQRYPGI 120 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGA 184 ++ + E + + G LD + + F + A P P Sbjct: 121 QLELREEGAREVEALVASGALDVGVTVL--PTDEARFEALPFVHDVLAAVLHPASPLARR 178 Query: 185 RS--IKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + L + + + ++ + +PQV + ++ A ++ Sbjct: 179 PRLALADLAGTPFLLYRADFALRGRILDACRAAGFSPQVASETGQWDFMAAMAAADVGVA 238 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRE 296 LP + L + ++P++ LI RR+ + + + R Sbjct: 239 LLPRTICRR-LDPAQVAVVPLAAPAIGWNLGLIWRREGTLSAAARAFVETAREV 291 >UniRef50_A5V773 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=A5V773_SPHWW Length = 351 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 78/297 (26%), Positives = 134/297 (45%), Gaps = 3/297 (1%) Query: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 ++ + +R + + GS+ A+ L M+QPA++K++QE E L +LF R ++GV T Sbjct: 3 RLTMRHLRIVLAITDGGSLVAAAHTLCMTQPAITKALQETEALLQIELFSRTNRGVVPTP 62 Query: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 AG + HA LI ++ A E+I + + G+I +G S S L+P I+ + P+ Sbjct: 63 AGLALAAHARLITAQIGHAAEEIHDLRDGMGGRIAVGTLLSASADLLPRAIAMLRRDRPK 122 Query: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIG 183 + V I+EG ++ +LR G+LD + + E LL + RPGHP +G Sbjct: 123 LVVTIVEGTNDRLLPDLRLGKLDMVVGRLPEYHELQGLHQEVLLTDVSCVIVRPGHPLVG 182 Query: 184 AR--SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQV-GVVCETFSACISLVAKSDF 240 + L + W +P + + + + D+ P V + SLV +D+ Sbjct: 183 RDPLRLADLAGWDWILPRLETTLRRHIDQAFRDEGVEPPPHAVESVSQLTNRSLVMDADY 242 Query: 241 LSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 L LP ++ LV+LP+ + R + R + LI R Sbjct: 243 LGILPWQLAHREARAGHLVILPLLLRPTIGPVGISTRAECRLSSAAEMLIAAMRDFA 299 >UniRef50_C3JEG8 Transcriptional regulator, LysR family protein n=2 Tax=Rhodococcus erythropolis RepID=C3JEG8_RHOER Length = 291 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 117/295 (39%), Gaps = 8/295 (2%) Query: 5 VKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDA 64 + + FV +A + + + ++SQP LS+ + LE + LF R+ + + L Sbjct: 2 MLTEDLEWFVVLAETQQVTATADLTHLSQPTLSRKLARLERQIGVTLFDRQGRRLELNRY 61 Query: 65 GESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQV 124 GE Y+HA + L L AAQ +I+ +G + + S L+P ++ + +HP V Sbjct: 62 GEILYRHARIALRALDAAQTEIQSLASPESGTVRLDFLHSFGTWLVPHMLRGYRVEHPGV 121 Query: 125 KVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAI-- 182 + + + +++ + G D + P D + + ++ ++ A+ H Sbjct: 122 RFELHQDSAQFLVDRIATGTSDLAVV--SPQPRDPQVAWMQIAQQSLALAVPADHRFAKL 179 Query: 183 GARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLS 242 + + D + P+ + L EL TP + LV+ S +S Sbjct: 180 HSVELADAADEPFIGMHPNFGMRRILDELCAAAGFTPNFVFESSELATVGGLVSASFGVS 239 Query: 243 KLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRREC 297 +P + P+ +G+V +PV + LI + + + R Sbjct: 240 VMP--VQDPPIWAEGVVYVPVEGA--QRKIGLIWSKSRELSDPARTFRDYVERTT 290 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.199 0.616 Lambda K H 0.267 0.0608 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,658,129,317 Number of Sequences: 3077464 Number of extensions: 179986721 Number of successful extensions: 638311 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 21909 Number of HSP's successfully gapped in prelim test: 2676 Number of HSP's that attempted gapping in prelim test: 577460 Number of HSP's gapped (non-prelim): 27134 length of query: 302 length of database: 1,040,396,356 effective HSP length: 128 effective length of query: 174 effective length of database: 646,480,964 effective search space: 112487687736 effective search space used: 112487687736 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.9 bits) S2: 94 (40.2 bits)