Phyre 2 alignment of P77744 with c3ivpD_

Return to main results | Retrieve Phyre Job Id

Job Description | P77744
Confidence | 30.76% | Date | Thu Jan 5 12:32:25 GMT 2012
Rank | 381 | Aligned Residues | 18
% Identity | 6% | Template | c3ivpD_
PDB info | PDB header:dna binding protein | Chain: D: PDB Molecule:putative transposon-related dna-binding protein; | PDBTitle: the structure of a possible transposon-related dna-binding protein2 from clostridium difficile 630.
Resolution | 2.02 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | S | I | R | G | A | S | R | M | L | N | M | S | Q | P | A | L | S | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | R | E | Q | V | G | A | X | I | E | I | D | P | R | Y | L | T | N
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  | T | S |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions