42 c1gndA_ Probab=99.24   E-value=9.5e-11  Score=90.91  Aligned_columns=252  Identities=12%

Q ss_pred             EEEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf             30089988957789999999736997299981788887766333352034420268863445323656567897237531
Q batch____         2 QFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNWAYETEPEPFMNNRRMECGR   81 (556)
Q Consensus         2 eYDvIIVGSG~~G~~~A~rLa~~~G~~VlvLE~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (556)
                      ||||||||+|.+|+++|..||+ +|+||+|||+....-......................+........+.-+-...+..
T Consensus         4 ~yDVvIiG~G~~Gl~~A~~La~-~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~p~~~~   82 (430)
T c1gndA_           4 EYDVIVLGTGLTECILSGIMSV-NGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFLM   82 (430)
T ss_dssp             BCSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCCSCCCGGGCCGGGCCEESSCCBEE
T ss_pred             CCCEEEECCCHHHHHHHHHHHH-CCCEEEEEECCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEC
T ss_conf             5328999797899999999998-898199996787987103877527823401552045522224334643012543330


Q ss_pred             CCC-------------------CCCCCHHHHHEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             221-------------------3730053412351699999988589808899888999999999997358886535788
Q batch____        82 GKG-------------------LGGSSLINGMCYIRGNALDLDNWAQEPGLENWSYLDCLPYYRKAETRDMGENDYHGGD  142 (556)
Q Consensus        82 g~~-------------------lGG~S~~~~~~~~r~~~~df~~w~~~~g~~~w~~~~l~p~y~~~e~~~~~~~~~~~~~  142 (556)
                      .+.                   ++..-....+...+.+....+.+....... +....+..+..................
T Consensus        83 ~~~~~~~~l~~~~~~~y~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~l~~-~ek~~~~~~~~~~~~~~~~~~~~~~~~  161 (430)
T c1gndA_          83 ANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGM-FEKRRFRKFLVFVANFDENDPKTFEGV  161 (430)
T ss_dssp             TTSHHHHHHHHHTGGGSCCEEECCEEEEEETTEEEECCCSHHHHHHCSSSCH-HHHHHHHHHHHHHHHCCTTCGGGSCSC
T ss_pred             CCCCHHHCCCCCCCCCEEEECCCCCCEECCCCCCHHCCCCHHHHHCCCCCCC-CCHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf             5763010000277200014214564302248500011169787731347680-222321238999874101210012220


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC---------------CCEEECCCEECCCCCCCCHHHHHHHH
Q ss_conf             651234776434858999999999738986667667676---------------53421276045897511548886899
Q batch____       143 GPVSVTTSKPGVNPLFEAMIEAGVQAGYPRTDDLNGYQQ---------------EGFGPMDRTVTPQGRRASTARGYLDQ  207 (556)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~g~k~s~~~~~l~~  207 (556)
                      .....+.......-.........................               .+......+..+.+.-......+...
T Consensus       162 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~p~gG~~~l~q~~~r~  241 (430)
T c1gndA_         162 DPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARL  241 (430)
T ss_dssp             CTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHTCCGGGCCSEEEETTCTTHHHHHHHHH
T ss_pred             HHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHH
T ss_conf             01039788999880899999999998988505777676537999999999974003667785376369758999999999


Q ss_pred             HHHCCCCEECCCCEEEEEEEECCEEEEEEEEECCCCEEEEEECCEEEEECCCCCCC
Q ss_conf             98279736556978999999599599999996898379998627179934766776
Q batch____       208 AKSRPNLTIRTHAMTDHIIFDGKRAVGVEWLEGDSTIPTRATANKEVLLCAGAIAS  263 (556)
Q Consensus       208 a~~~~~~~i~~~~~V~~i~~~~~~~~gv~~~~~~~~~~~~~~a~~~VILaaGai~T  263 (556)
                      +...++ ++++|+.|++|..+++++++|..    +++..+   ++.||.+++.+..
T Consensus       242 ~~~~Gg-~i~l~~~V~~I~~~~~~v~~V~~----~G~~i~---a~~VI~~~~~~p~  289 (430)
T c1gndA_         242 SAIYGG-TYMLNKPVDDIIMENGKVVGVKS----EGEVAR---CKQLICDPSYVPD  289 (430)
T ss_dssp             HHHHTC-EEESSCCCCEECCBTTBCCCEEE----TTEEEB---CSEEEECGGGCGG
T ss_pred             HHHCCC-EEEEECEEEEEEEECCEEEEEEE----CCEEEE---CCEEEECCCCCCH
T ss_conf             864565-59970221179997896999982----790898---6899987111570