17 c2ch4A_ Probab=99.93   E-value=6.5e-26  Score=179.69  Aligned_columns=144  Identities=27%

Q ss_pred             CCCHHHHHHHHHHHHHHCCCCCCCCCCCEEE-ECHHHHHHHHHCCCCCCCCCC--------------CCEEEEEEEEECC
Q ss_conf             0101233222223321001200168661798-735787676520235501148--------------8608999999699
Q batch____       301 LNAVLGEVIAAESGYEREIETALYPGSIEVK-MHPLSIKRAVANMVVNAARYG--------------NGWIKVSSGTEPN  365 (450)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~d~~~l~~vl~NLl~NA~~~~--------------~~~i~i~~~~~~~  365 (450)
                      ...+...........++.+.+.+......+. .....+++++.||+.||++|+              .+.|.|+++.+++
T Consensus        11 ~~~l~~~v~~~a~~~gk~v~l~~~~~~~~~d~~~~~~l~~~l~~li~NAi~~~~e~~~~r~~~gk~~~g~i~i~~~~~~~   90 (320)
T c2ch4A_          11 FNRFPRMVRDLAKKMNKEVNFIMRGEDTELDRTFVEEIGEPLLHLLRNAIDHGIEPKEERIAKGKPPIGTLILSARHEGN   90 (320)
T ss_dssp             HTSHHHHHHHHHHTTTCCEEEEEECTTCEEETTHHHHTHHHHHHHHHHHHHTTSCCHHHHHHTTCCSSEEEEEEEEECSS
T ss_pred             HHHHHHHHHHHHHHHCCCEEEEEECCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEEEEECC
T ss_conf             99999999999998389379999655103444789999999999999999701215300011368998589999996789


Q ss_pred             EEEEEEEECCCCCC------------------------HHHHHHHCCCCEEECCC-CCCCCCCHHHHHHHHHHHHCCCEE
Q ss_conf             89999997889889------------------------88886532672560577-678877516899999999709869
Q batch____       366 RAWFQVEDDGPGIA------------------------PEQRKHLFQPFVRGDSA-RTISGTGLGLAIVQRIVDNHNGML  420 (450)
Q Consensus       366 ~~~i~V~D~G~Gi~------------------------~~~~~~iF~~F~r~~~s-~~~~G~GLGL~i~~~iv~~~gG~i  420 (450)
                      ++.|+|+|||+||+                        ++.+++||+|||++..+ +..+|+||||++|+++++.|||+|
T Consensus        91 ~~~i~v~D~G~Gi~~~~i~~~a~~~~~~~~~~~~~~~~~e~~~~if~~~~s~~~~~~~~~g~glGl~~v~~~~~~~~g~i  170 (320)
T c2ch4A_          91 NVVIEVEDDGRGIDKEKIIRKAIEKGLIDESKAATLSDQEILNFLFVPGFSTKEKVSEVSGRGVGMDVVKNVVESLNGSI  170 (320)
T ss_dssp             EEEEEEEECSSCCCHHHHHHHHHHTTCSCTTGGGSCCHHHHHHTTTSTTTTCCCSHHHHTSSCCCHHHHHHHHHHTTCEE
T ss_pred             EEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCEE
T ss_conf             89999963888987013477787635889788256897898885237750313678877645402899998998609879


Q ss_pred             EEEECCCCCEEEEEEECCCCCCCC
Q ss_conf             999608994799999665454347
Q batch____       421 ELGTSERGGLSIRAWLPVPVTRAQ  444 (450)
Q Consensus       421 ~~~s~~~~Gt~f~i~lPl~~~~~~  444 (450)
                      +++|.+|+||+|+++||+.....+
T Consensus       171 ~~~s~~~~gt~~~~~~p~~~~~~~  194 (320)
T c2ch4A_         171 SIESEKDKGTKVTIRLPLTLAIIQ  194 (320)
T ss_dssp             EEEECTTSCEEEEEEEESSCCEEE
T ss_pred             EEEEECCCCEEEEEEECCCCCCCC
T ss_conf             999788995599999526655332