151 c3n8hA_ Probab=97.83   E-value=0.00049  Score=43.81  Aligned_columns=153  Identities=16%

Q ss_pred             CHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             45667666875132124678837999514774587899999999986090799996078642122455577668998999
Q batch____        44 SAQKLEALHRFLGLEFPRQKKTIGVVFGKFYPLHTGHIYLIQRACSQVDELHIIMGFDDTRDRALFEDSAMSQQPTVPDR  123 (410)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~kk~IGI~iGkFdPlH~GH~~lI~~A~~~~D~l~vvV~~~~~~~~~~~~~~~~~~~~t~e~R  123 (410)
                      +.+.|+.+.+-.     ++-++||+|+ +---+|-||+.||++|.+.+|.++|-|+.+|..=+.  .+.-.+-+-+++.-
T Consensus         7 ti~~~~~~r~~~-----~~~~~vg~VP-TMGaLH~GHlsLi~~A~~~~d~vVVSIFVNP~QF~~--~eD~~~YPR~l~~D   78 (263)
T c3n8hA_           7 NIKQFHSIRNSL-----IKQQKIGFVP-TXGALHNGHISLIKKAKSENDVVIVSIFVNPTQFNN--PNDYQTYPNQLQQD   78 (263)
T ss_dssp             SHHHHHHHHHTS-----CTTSCEEEEE-ECSSCCHHHHHHHHHHHHHCSEEEEEECCCGGGCSC--HHHHHHSCCCHHHH
T ss_pred             CHHHHHHHHHHH-----HCCCCEEEEC-CCCCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCC--HHHHHHCCCCHHHH
T ss_conf             799999999998-----7199589975-897325899999999998689299998527012788--34656469998999


Q ss_pred             HHHHHHHCCCCCCEEEEECCC-----CCCCCCCHHHHHHHHHHHHHHH--------------HCCCCCCEEECCCHHHHH
Q ss_conf             999999603577149875154-----5788330027999988887876--------------507766379701354547
Q batch____       124 LRWLLQTFKYQKNIRIHAFNE-----EGMEPYPHGWDVWSNGIKKFMA--------------EKGIQPDLIYTSEEADAP  184 (410)
Q Consensus       124 ~~~i~~~~~d~~~v~v~~~~~-----~~i~~~~~~~~~~~~~~~~~i~--------------~l~~~~D~vf~~e~~~~~  184 (410)
                      .++++.++.|.    ||.-..     ............+...+....+              .....+|..|-||.++.+
T Consensus        79 ~~ll~~~gvD~----vF~P~~~emYP~g~~~~v~~~~~l~~~leG~~RPghF~GV~Tvv~KLfniv~P~~a~fGeKD~QQ  154 (263)
T c3n8hA_          79 IQILASLDVDV----LFNPSEKDIYPDGNLLRIEPKLEIANILEGKSRPGHFSGXLTVVLKLLQITKPNNLYLGEKDYQQ  154 (263)
T ss_dssp             HHHHHHTTCSE----EECCCHHHHCTTCSCSCCCCCSHHHHSTHHHHSTTHHHHHHHHHHHHHHHHCCSEEEEETTSHHH
T ss_pred             HHHHHHCCCCE----EEECCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCHHH
T ss_conf             99999769989----99288678288997138861632000126889987112369999998631289887970332999


Q ss_pred             HHH-------HCCCCCEEEEEC--CCCCCCCCH
Q ss_conf             777-------336983899705--825267539
Q batch____       185 QYM-------EHLGIETVLVDP--KRTFMSISG  208 (410)
Q Consensus       185 ~~~-------~~~g~e~i~i~~--~r~~~~ISS  208 (410)
                      -..       ..++.+++..+.  +.++...||
T Consensus       155 l~iir~mv~dL~~~v~I~~~ptvRe~dGLAlSS  187 (263)
T c3n8hA_         155 VXLIKQLVKDFFINTKIIVCPTQRQPSGLPLSS  187 (263)
T ss_dssp             HHHHHHHHHHTTCCCEEEEECCCBCTTSCBCCG
T ss_pred             HHHHHHHHHHCCCCEEEEEEEEEECCCCEEEEH
T ss_conf             999999997418860687620024478704100