Phyre 2 Results for P77757

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Email | l.a.kelley@imperial.ac.uk
Description | P77757
Date | Thu Jan 5 12:32:37 GMT 2012
Unique Job ID | d0fcf06abf6872f2

Summary |

Top model
Image coloured by rainbow N → C terminus
| Close Jmol

Model (left) based on template c1xhbA_
Top template information
PDB header:transferase Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 1; PDBTitle: the crystal structure of udp-galnac: polypeptide alpha-n-2 acetylgalactosaminyltransferase-t1
Confidence and coverage
Confidence: | 100.0% | Coverage: | 61%
196 residues ( 61% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
3D viewing
Interactive 3D view in Jmol

Sequence analysis |

Secondary structure and disorder prediction |

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Sequence |  | M | F | E | I | H | P | V | K | K | V | S | V | V | I | P | V | Y | N | E | Q | E | S | L | P | E | L | I | R | R | T | T | T | A | C | E | S | L | G | K | E | Y | E | I | L | L | I | D | D | G | S | S | D | N | S | A | H | M | L | V | E
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Sequence |  | A | S | Q | A | E | N | S | H | I | V | S | I | L | L | N | R | N | Y | G | Q | H | S | A | I | M | A | G | F | S | H | V | T | G | D | L | I | I | T | L | D | A | D | L | Q | N | P | P | E | E | I | P | R | L | V | A | K | A | D | E | G
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180
Sequence |  | Y | D | V | V | G | T | V | R | Q | N | R | Q | D | S | W | F | R | K | T | A | S | K | M | I | N | R | L | I | Q | R | T | T | G | K | A | M | G | D | Y | G | C | M | L | R | A | Y | R | R | H | I | V | D | A | M | L | H | C | H | E | R
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240
Sequence |  | S | T | F | I | P | I | L | A | N | I | F | A | R | R | A | I | E | I | P | V | H | H | A | E | R | E | F | G | E | S | K | Y | S | F | M | R | L | I | N | L | M | Y | D | L | V | T | C | L | T | T | T | P | L | R | M | L | S | L | L | G
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300
Sequence |  | S | I | I | A | I | G | G | F | S | I | A | V | L | L | V | I | L | R | L | T | F | G | P | Q | W | A | A | E | G | V | F | M | L | F | A | V | L | F | T | F | I | G | A | Q | F | I | G | M | G | L | L | G | E | Y | I | G | R | I | Y | T
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | .
Sequence |  | D | V | R | A | R | P | R | Y | F | V | Q | Q | V | I | R | P | S | S | K | E | N | E
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |

Confidence Key
High(9) |  |  |  |  |  |  |  |  |  |  | Low (0)

? | Disordered
| Alpha helix
| Beta strand

Domain analysis |

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank | Aligned region
--- | ---
1 |
| c1xhbA_ |

### PDB 1xhb chain A

Region: 4 - 202
Aligned: 196
Modelled: 199
Confidence: 100.0%
Identity: 18%
PDB header:transferase
Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 1;
PDBTitle: the crystal structure of udp-galnac: polypeptide alpha-n-2 acetylgalactosaminyltransferase-t1

Phyre2
2 |
| d1xhba2 |

### PDB 1xhb chain A domain 2

Region: 4 - 199
Aligned: 193
Modelled: 196
Confidence: 100.0%
Identity: 18%
Fold: Nucleotide-diphospho-sugar transferases
Superfamily: Nucleotide-diphospho-sugar transferases
Family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain

Phyre2
3 |
| c3f1yC_ |

### PDB 3f1y chain C

Region: 8 - 231
Aligned: 224
Modelled: 224
Confidence: 100.0%
Identity: 14%
PDB header:transferase
Chain: C: PDB Molecule:mannosyl-3-phosphoglycerate synthase;
PDBTitle: mannosyl-3-phosphoglycerate synthase from rubrobacter xylanophilus

Phyre2
4 |
| c2ffuA_ |

### PDB 2ffu chain A

Region: 4 - 202
Aligned: 192
Modelled: 195
Confidence: 100.0%
Identity: 17%
PDB header:transferase
Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 2;
PDBTitle: crystal structure of human ppgalnact-2 complexed with udp2 and ea2

Phyre2
5 |
| c2d7iA_ |

### PDB 2d7i chain A

Region: 4 - 202
Aligned: 196
Modelled: 199
Confidence: 100.0%
Identity: 18%
PDB header:transferase
Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 10;
PDBTitle: crsytal structure of pp-galnac-t10 with udp, galnac and mn2+

Phyre2
6 |
| c3ckvA_ |

### PDB 3ckv chain A

Region: 8 - 227
Aligned: 215
Modelled: 220
Confidence: 100.0%
Identity: 16%
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of a mycobacterial protein

Phyre2
7 |
| c2z86D_ |

### PDB 2z86 chain D

Region: 5 - 199
Aligned: 191
Modelled: 195
Confidence: 100.0%
Identity: 15%
PDB header:transferase
Chain: D: PDB Molecule:chondroitin synthase;
PDBTitle: crystal structure of chondroitin polymerase from2 escherichia coli strain k4 (k4cp) complexed with udp-glcua3 and udp

Phyre2
8 |
| c3bcvA_ |

### PDB 3bcv chain A

Region: 7 - 199
Aligned: 188
Modelled: 193
Confidence: 100.0%
Identity: 18%
PDB header:transferase
Chain: A: PDB Molecule:putative glycosyltransferase protein;
PDBTitle: crystal structure of a putative glycosyltransferase from bacteroides2 fragilis

Phyre2
9 |
| d1omza_ |

### PDB 1omz chain A

Region: 6 - 126
Aligned: 115
Modelled: 121
Confidence: 99.9%
Identity: 10%
Fold: Nucleotide-diphospho-sugar transferases
Superfamily: Nucleotide-diphospho-sugar transferases
Family: Exostosin

Phyre2
10 |
| c1omxB_ |

### PDB 1omx chain B

Region: 6 - 126
Aligned: 115
Modelled: 121
Confidence: 99.9%
Identity: 10%
PDB header:transferase
Chain: B: PDB Molecule:alpha-1,4-n-acetylhexosaminyltransferase extl2;
PDBTitle: crystal structure of mouse alpha-1,4-n-2 acetylhexosaminyltransferase (extl2)

Phyre2
11 |
| d1qg8a_ |

### PDB 1qg8 chain A

Region: 8 - 228
Aligned: 201
Modelled: 194
Confidence: 99.9%
Identity: 12%
Fold: Nucleotide-diphospho-sugar transferases
Superfamily: Nucleotide-diphospho-sugar transferases
Family: Spore coat polysaccharide biosynthesis protein SpsA

Phyre2
12 |
| d2bo4a1 |

### PDB 2bo4 chain A domain 1

Region: 12 - 216
Aligned: 201
Modelled: 205
Confidence: 99.8%
Identity: 15%
Fold: Nucleotide-diphospho-sugar transferases
Superfamily: Nucleotide-diphospho-sugar transferases
Family: MGS-like

Phyre2
13 |
| c2qgiA_ |

### PDB 2qgi chain A

Region: 14 - 225
Aligned: 201
Modelled: 201
Confidence: 99.7%
Identity: 16%
PDB header:transferase
Chain: A: PDB Molecule:atp synthase subunits region orf 6;
PDBTitle: the udp complex structure of the sixth gene product of the f1-atpase2 operon of rhodobacter blasticus

Phyre2
14 |
| d1pzta_ |

### PDB 1pzt chain A

Region: 5 - 195
Aligned: 145
Modelled: 145
Confidence: 98.9%
Identity: 15%
Fold: Nucleotide-diphospho-sugar transferases
Superfamily: Nucleotide-diphospho-sugar transferases
Family: beta 1,4 galactosyltransferase (b4GalT1)

Phyre2
15 |
| c3lw6A_ |

### PDB 3lw6 chain A

Region: 5 - 195
Aligned: 147
Modelled: 147
Confidence: 98.4%
Identity: 13%
PDB header:transferase
Chain: A: PDB Molecule:beta-4-galactosyltransferase 7;
PDBTitle: crystal structure of drosophila beta1,4-galactosyltransferase-7

Phyre2
16 |
| d1fo8a_ |

### PDB 1fo8 chain A

Region: 7 - 133
Aligned: 125
Modelled: 127
Confidence: 98.3%
Identity: 10%
Fold: Nucleotide-diphospho-sugar transferases
Superfamily: Nucleotide-diphospho-sugar transferases
Family: N-acetylglucosaminyltransferase I

Phyre2
17 |
| c2wvmA_ |

### PDB 2wvm chain A

Region: 9 - 183
Aligned: 168
Modelled: 175
Confidence: 98.2%
Identity: 17%
PDB header:transferase
Chain: A: PDB Molecule:mannosyl-3-phosphoglycerate synthase;
PDBTitle: h309a mutant of mannosyl-3-phosphoglycerate synthase from2 thermus thermophilus hb27 in complex with3 gdp-alpha-d-mannose and mg(ii)

Phyre2
18 |
| c2zu8A_ |

### PDB 2zu8 chain A

Region: 9 - 183
Aligned: 167
Modelled: 173
Confidence: 98.1%
Identity: 16%
PDB header:transferase
Chain: A: PDB Molecule:mannosyl-3-phosphoglycerate synthase;
PDBTitle: crystal structure of mannosyl-3-phosphoglycerate synthase2 from pyrococcus horikoshii

Phyre2
19 |
| c2d0jD_ |

### PDB 2d0j chain D

Region: 7 - 113
Aligned: 104
Modelled: 107
Confidence: 97.0%
Identity: 14%
PDB header:transferase
Chain: D: PDB Molecule:galactosylgalactosylxylosylprotein 3-beta-
PDBTitle: crystal structure of human glcat-s apo form

Phyre2
20 |
| d1v82a_ |

### PDB 1v82 chain A

Region: 7 - 113
Aligned: 105
Modelled: 107
Confidence: 96.7%
Identity: 15%
Fold: Nucleotide-diphospho-sugar transferases
Superfamily: Nucleotide-diphospho-sugar transferases
Family: 1,3-glucuronyltransferase

Phyre2
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Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c1xhbA_ |
|  | 100.0 | 18 | PDB header:transferase Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 1; PDBTitle: the crystal structure of udp-galnac: polypeptide alpha-n-2 acetylgalactosaminyltransferase-t1
2 | d1xhba2 |
|  | 100.0 | 18 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
3 | c3f1yC_ |
|  | 100.0 | 14 | PDB header:transferase Chain: C: PDB Molecule:mannosyl-3-phosphoglycerate synthase; PDBTitle: mannosyl-3-phosphoglycerate synthase from rubrobacter xylanophilus
4 | c2ffuA_ |
|  | 100.0 | 17 | PDB header:transferase Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 2; PDBTitle: crystal structure of human ppgalnact-2 complexed with udp2 and ea2
5 | c2d7iA_ |
|  | 100.0 | 18 | PDB header:transferase Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 10; PDBTitle: crsytal structure of pp-galnac-t10 with udp, galnac and mn2+
6 | c3ckvA_ |
|  | 100.0 | 16 | PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of a mycobacterial protein
7 | c2z86D_ |
|  | 100.0 | 15 | PDB header:transferase Chain: D: PDB Molecule:chondroitin synthase; PDBTitle: crystal structure of chondroitin polymerase from2 escherichia coli strain k4 (k4cp) complexed with udp-glcua3 and udp
8 | c3bcvA_ |
|  | 100.0 | 18 | PDB header:transferase Chain: A: PDB Molecule:putative glycosyltransferase protein; PDBTitle: crystal structure of a putative glycosyltransferase from bacteroides2 fragilis
9 | d1omza_ |
|  | 99.9 | 10 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:Exostosin
10 | c1omxB_ |
|  | 99.9 | 10 | PDB header:transferase Chain: B: PDB Molecule:alpha-1,4-n-acetylhexosaminyltransferase extl2; PDBTitle: crystal structure of mouse alpha-1,4-n-2 acetylhexosaminyltransferase (extl2)
11 | d1qg8a_ |
|  | 99.9 | 12 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:Spore coat polysaccharide biosynthesis protein SpsA
12 | d2bo4a1 |
|  | 99.8 | 15 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:MGS-like
13 | c2qgiA_ |
|  | 99.7 | 16 | PDB header:transferase Chain: A: PDB Molecule:atp synthase subunits region orf 6; PDBTitle: the udp complex structure of the sixth gene product of the f1-atpase2 operon of rhodobacter blasticus
14 | d1pzta_ |
|  | 98.9 | 15 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:beta 1,4 galactosyltransferase (b4GalT1)
15 | c3lw6A_ |
|  | 98.4 | 13 | PDB header:transferase Chain: A: PDB Molecule:beta-4-galactosyltransferase 7; PDBTitle: crystal structure of drosophila beta1,4-galactosyltransferase-7
16 | d1fo8a_ |
|  | 98.3 | 10 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:N-acetylglucosaminyltransferase I
17 | c2wvmA_ |
|  | 98.2 | 17 | PDB header:transferase Chain: A: PDB Molecule:mannosyl-3-phosphoglycerate synthase; PDBTitle: h309a mutant of mannosyl-3-phosphoglycerate synthase from2 thermus thermophilus hb27 in complex with3 gdp-alpha-d-mannose and mg(ii)
18 | c2zu8A_ |
|  | 98.1 | 16 | PDB header:transferase Chain: A: PDB Molecule:mannosyl-3-phosphoglycerate synthase; PDBTitle: crystal structure of mannosyl-3-phosphoglycerate synthase2 from pyrococcus horikoshii
19 | c2d0jD_ |
|  | 97.0 | 14 | PDB header:transferase Chain: D: PDB Molecule:galactosylgalactosylxylosylprotein 3-beta- PDBTitle: crystal structure of human glcat-s apo form
20 | d1v82a_ |
|  | 96.7 | 15 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:1,3-glucuronyltransferase
21 | d3cu0a1 |
| not modelled | 95.9 | 16 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:1,3-glucuronyltransferase
22 | d1vh3a_ |
| not modelled | 95.0 | 10 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:Cytidylytransferase
23 | c1w57A_ |
| not modelled | 94.3 | 8 | PDB header:transferase Chain: A: PDB Molecule:ispd/ispf bifunctional enzyme; PDBTitle: structure of the bifunctional ispdf from campylobacter2 jejuni containing zn
24 | c2wawA_ |
| not modelled | 94.1 | 14 | PDB header:unknown function Chain: A: PDB Molecule:moba relate protein; PDBTitle: crystal structure of mycobacterium tuberculosis rv0371c2 homolog from mycobacterium sp. strain jc1
25 | c2px7A_ |
| not modelled | 93.6 | 13 | PDB header:transferase Chain: A: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate PDBTitle: crystal structure of 2-c-methyl-d-erythritol 4-phosphate2 cytidylyltransferase from thermus thermophilus hb8
26 | d1w55a1 |
| not modelled | 92.7 | 8 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:Cytidylytransferase
27 | c3tztB_ |
| not modelled | 92.6 | 14 | PDB header:transferase Chain: B: PDB Molecule:glycosyl transferase family 8; PDBTitle: the structure of a protein in glycosyl transferase family 8 from2 anaerococcus prevotii.
28 | c3d5nB_ |
| not modelled | 88.5 | 15 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:q97w15_sulso; PDBTitle: crystal structure of the q97w15_sulso protein from2 sulfolobus solfataricus. nesg target ssr125.
29 | d1qwja_ |
| not modelled | 86.5 | 7 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:Cytidylytransferase
30 | d1i52a_ |
| not modelled | 84.1 | 12 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:Cytidylytransferase
31 | c3okrA_ |
| not modelled | 82.6 | 15 | PDB header:transferase Chain: A: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase; PDBTitle: structure of mtb apo 2-c-methyl-d-erythritol 4-phosphate2 cytidyltransferase (ispd)
32 | d1w77a1 |
| not modelled | 79.8 | 10 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:Cytidylytransferase
33 | d1lvwa_ |
| not modelled | 79.7 | 13 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:glucose-1-phosphate thymidylyltransferase
34 | c2j0bA_ |
| not modelled | 79.0 | 14 | PDB header:transferase Chain: A: PDB Molecule:beta-1,3-n-acetylglucosaminyltransferase manic fringe; PDBTitle: structure of the catalytic domain of mouse manic fringe in2 complex with udp and manganese
35 | d1fxoa_ |
| not modelled | 77.3 | 16 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:glucose-1-phosphate thymidylyltransferase
36 | c2xwlB_ |
| not modelled | 73.0 | 19 | PDB header:transferase Chain: B: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase; PDBTitle: crystal structure of ispd from mycobacterium smegmatis in complex2 with ctp and mg
37 | c2gamA_ |
| not modelled | 71.3 | 13 | PDB header:transferase Chain: A: PDB Molecule:beta-1,6-n-acetylglucosaminyltransferase; PDBTitle: x-ray crystal structure of murine leukocyte-type core 2 b1,2 6-n-acetylglucosaminyltransferase (c2gnt-l) in complex3 with galb1,3galnac
38 | d1mc3a_ |
| not modelled | 69.7 | 11 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:glucose-1-phosphate thymidylyltransferase
39 | d1iina_ |
| not modelled | 66.5 | 12 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:glucose-1-phosphate thymidylyltransferase
40 | d2cz4a1 |
| not modelled | 66.5 | 26 | Fold:Ferredoxin-like Superfamily:GlnB-like Family:Prokaryotic signal transducing protein
41 | d1vpaa_ |
| not modelled | 65.6 | 5 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:Cytidylytransferase
42 | d1ga8a_ |
| not modelled | 63.4 | 16 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:Galactosyltransferase LgtC
43 | c1ga8A_ |
| not modelled | 63.4 | 16 | PDB header:transferase Chain: A: PDB Molecule:galactosyl transferase lgtc; PDBTitle: crystal structure of galacosyltransferase lgtc in complex2 with donor and acceptor sugar analogs.
44 | d1h5ra_ |
| not modelled | 61.9 | 13 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:glucose-1-phosphate thymidylyltransferase
45 | c1zcyA_ |
| not modelled | 61.1 | 10 | PDB header:transferase Chain: A: PDB Molecule:glycogenin-1; PDBTitle: apo form of a mutant of glycogenin in which asp159 is replaced by ser
46 | d1vgwa_ |
| not modelled | 60.2 | 18 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:Cytidylytransferase
47 | c1jylC_ |
| not modelled | 59.6 | 12 | PDB header:transferase Chain: C: PDB Molecule:ctp:phosphocholine cytidylytransferase; PDBTitle: catalytic mechanism of ctp:phosphocholine2 cytidylytransferase from streptococcus pneumoniae (licc)
48 | c2xmhB_ |
| not modelled | 58.3 | 11 | PDB header:transferase Chain: B: PDB Molecule:ctp-inositol-1-phosphate cytidylyltransferase; PDBTitle: the x-ray structure of ctp:inositol-1-phosphate2 cytidylyltransferase from archaeoglobus fulgidus
49 | d1e5ka_ |
| not modelled | 56.9 | 16 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:Molybdenum cofactor biosynthesis protein MobA
50 | d2oi6a2 |
| not modelled | 55.7 | 15 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:UDP-glucose pyrophosphorylase
51 | d1ll2a_ |
| not modelled | 54.7 | 11 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:Glycogenin
52 | c3hl3A_ |
| not modelled | 52.8 | 8 | PDB header:transferase Chain: A: PDB Molecule:glucose-1-phosphate thymidylyltransferase; PDBTitle: 2.76 angstrom crystal structure of a putative glucose-1-phosphate2 thymidylyltransferase from bacillus anthracis in complex with a3 sucrose.
53 | c2f59B_ |
| not modelled | 51.3 | 13 | PDB header:transferase Chain: B: PDB Molecule:6,7-dimethyl-8-ribityllumazine synthase 1; PDBTitle: lumazine synthase ribh1 from brucella abortus (gene bruab1_0785,2 swiss-prot entry q57dy1) complexed with inhibitor 5-nitro-6-(d-3 ribitylamino)-2,4(1h,3h) pyrimidinedione
54 | c3okrC_ |
| not modelled | 50.0 | 18 | PDB header:transferase Chain: C: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase; PDBTitle: structure of mtb apo 2-c-methyl-d-erythritol 4-phosphate2 cytidyltransferase (ispd)
55 | c3oamD_ |
| not modelled | 49.1 | 19 | PDB header:transferase Chain: D: PDB Molecule:3-deoxy-manno-octulosonate cytidylyltransferase; PDBTitle: crystal structure of cytidylyltransferase from vibrio cholerae
56 | c3brcA_ |
| not modelled | 47.6 | 18 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein of unknown function; PDBTitle: crystal structure of a conserved protein of unknown function from2 methanobacterium thermoautotrophicum
57 | c2c0nA_ |
| not modelled | 45.1 | 19 | PDB header:viral protein/transferase Chain: A: PDB Molecule:a197; PDBTitle: crystal structure of a197 from stiv
58 | c3tqdA_ |
| not modelled | 44.9 | 16 | PDB header:transferase Chain: A: PDB Molecule:3-deoxy-manno-octulosonate cytidylyltransferase; PDBTitle: structure of the 3-deoxy-d-manno-octulosonate cytidylyltransferase2 (kdsb) from coxiella burnetii
59 | c1vkoA_ |
| not modelled | 44.9 | 18 | PDB header:isomerase Chain: A: PDB Molecule:inositol-3-phosphate synthase; PDBTitle: crystal structure of inositol-3-phosphate synthase (ce21227) from2 caenorhabditis elegans at 2.30 a resolution
60 | c2bmxB_ |
| not modelled | 43.9 | 11 | PDB header:oxidoreductase Chain: B: PDB Molecule:alkyl hydroperoxidase c; PDBTitle: mycobacterium tuberculosis ahpc
61 | d1wp0a1 |
| not modelled | 43.0 | 10 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like
62 | d1vica_ |
| not modelled | 42.7 | 15 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:Cytidylytransferase
63 | c1zctB_ |
| not modelled | 40.8 | 10 | PDB header:transferase Chain: B: PDB Molecule:glycogenin-1; PDBTitle: structure of glycogenin truncated at residue 270 in a2 complex with udp
64 | d2aifa1 |
| not modelled | 40.4 | 14 | Fold:Bacillus chorismate mutase-like Superfamily:L30e-like Family:L30e/L7ae ribosomal proteins
65 | d1vkpa_ |
| not modelled | 36.7 | 14 | Fold:Pentein, beta/alpha-propeller Superfamily:Pentein Family:Porphyromonas-type peptidylarginine deiminase
66 | c2e8bA_ |
| not modelled | 35.9 | 10 | PDB header:biosynthetic protein Chain: A: PDB Molecule:probable molybdopterin-guanine dinucleotide biosynthesis PDBTitle: crystal structure of the putative protein (aq1419) from aquifex2 aeolicus vf5
67 | d2bmxa1 |
| not modelled | 35.6 | 11 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like
68 | c3sirD_ |
| not modelled | 35.4 | 11 | PDB header:hydrolase Chain: D: PDB Molecule:caspase; PDBTitle: crystal structure of drice
69 | d3b48a1 |
| not modelled | 34.2 | 9 | Fold:PTS system fructose IIA component-like Superfamily:PTS system fructose IIA component-like Family:DhaM-like
70 | c2qh5B_ |
| not modelled | 33.0 | 11 | PDB header:isomerase Chain: B: PDB Molecule:mannose-6-phosphate isomerase; PDBTitle: crystal structure of mannose-6-phosphate isomerase from helicobacter2 pylori
71 | c2nn3D_ |
| not modelled | 31.3 | 6 | PDB header:hydrolase Chain: D: PDB Molecule:caspase-1; PDBTitle: structure of pro-sf-caspase-1
72 | d1f1ja_ |
| not modelled | 29.6 | 20 | Fold:Caspase-like Superfamily:Caspase-like Family:Caspase catalytic domain
73 | c3sipC_ |
| not modelled | 29.5 | 13 | PDB header:hydrolase/ligase/hydrolase Chain: C: PDB Molecule:caspase; PDBTitle: crystal structure of drice and diap1-bir1 complex
74 | c3v8bC_ |
| not modelled | 28.0 | 11 | PDB header:oxidoreductase Chain: C: PDB Molecule:putative dehydrogenase, possibly 3-oxoacyl-[acyl-carrier PDBTitle: crystal structure of a 3-ketoacyl-acp reductase from sinorhizobium2 meliloti 1021
75 | c3or5A_ |
| not modelled | 27.9 | 6 | PDB header:oxidoreductase Chain: A: PDB Molecule:thiol:disulfide interchange protein, thioredoxin family PDBTitle: crystal structure of thiol:disulfide interchange protein, thioredoxin2 family protein from chlorobium tepidum tls
76 | d2bu3a1 |
| not modelled | 27.6 | 13 | Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Phytochelatin synthase
77 | d1gqna_ |
| not modelled | 27.5 | 11 | Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase
78 | c3f1cB_ |
| not modelled | 27.2 | 11 | PDB header:transferase Chain: B: PDB Molecule:putative 2-c-methyl-d-erythritol 4-phosphate PDBTitle: crystal structure of 2-c-methyl-d-erythritol 4-phosphate2 cytidylyltransferase from listeria monocytogenes
79 | d1xkna_ |
| not modelled | 26.6 | 25 | Fold:Pentein, beta/alpha-propeller Superfamily:Pentein Family:Porphyromonas-type peptidylarginine deiminase
80 | d1zbra1 |
| not modelled | 26.4 | 22 | Fold:Pentein, beta/alpha-propeller Superfamily:Pentein Family:Porphyromonas-type peptidylarginine deiminase
81 | c3polA_ |
| not modelled | 26.2 | 15 | PDB header:transferase Chain: A: PDB Molecule:3-deoxy-manno-octulosonate cytidylyltransferase; PDBTitle: 2.3 angstrom crystal structure of 3-deoxy-manno-octulosonate2 cytidylyltransferase (kdsb) from acinetobacter baumannii.
82 | c2vshB_ |
| not modelled | 26.1 | 11 | PDB header:transferase Chain: B: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate PDBTitle: synthesis of cdp-activated ribitol for teichoic acid2 precursors in streptococcus pneumoniae
83 | c3d98A_ |
| not modelled | 23.6 | 14 | PDB header:transferase Chain: A: PDB Molecule:bifunctional protein glmu; PDBTitle: crystal structure of glmu from mycobacterium tuberculosis, ligand-free2 form
84 | c2x5sB_ |
| not modelled | 23.0 | 6 | PDB header:transferase Chain: B: PDB Molecule:mannose-1-phosphate guanylyltransferase; PDBTitle: crystal structure of t. maritima gdp-mannose2 pyrophosphorylase in apo state.
85 | c2jerG_ |
| not modelled | 23.0 | 16 | PDB header:hydrolase Chain: G: PDB Molecule:agmatine deiminase; PDBTitle: agmatine deiminase of enterococcus faecalis catalyzing its2 reaction.
86 | c2cu2A_ |
| not modelled | 22.4 | 18 | PDB header:transferase Chain: A: PDB Molecule:putative mannose-1-phosphate guanylyl transferase; PDBTitle: crystal structure of mannose-1-phosphate geranyltransferase from2 thermus thermophilus hb8
87 | c2qkxA_ |
| not modelled | 21.9 | 15 | PDB header:transferase Chain: A: PDB Molecule:bifunctional protein glmu; PDBTitle: n-acetyl glucosamine 1-phosphate uridyltransferase from mycobacterium2 tuberculosis complex with n-acetyl glucosamine 1-phosphate
88 | d2qapa1 |
| not modelled | 21.4 | 18 | Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase
89 | c2dvzA_ |
| not modelled | 21.0 | 11 | PDB header:transport protein Chain: A: PDB Molecule:putative exported protein; PDBTitle: structure of a periplasmic transporter
90 | c2h8gA_ |
| not modelled | 20.8 | 27 | PDB header:hydrolase Chain: A: PDB Molecule:5'-methylthioadenosine nucleosidase; PDBTitle: 5'-methylthioadenosine nucleosidase from arabidopsis2 thaliana
91 | d1jyka_ |
| not modelled | 20.5 | 11 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:Cytidylytransferase
92 | d2jera1 |
| not modelled | 20.5 | 16 | Fold:Pentein, beta/alpha-propeller Superfamily:Pentein Family:Porphyromonas-type peptidylarginine deiminase
93 | d2ewoa1 |
| not modelled | 20.2 | 6 | Fold:Pentein, beta/alpha-propeller Superfamily:Pentein Family:Porphyromonas-type peptidylarginine deiminase
94 | c2f5xC_ |
| not modelled | 19.3 | 16 | PDB header:transport protein Chain: C: PDB Molecule:bugd; PDBTitle: structure of periplasmic binding protein bugd
95 | c2we9A_ |
| not modelled | 19.2 | 13 | PDB header:unknown function Chain: A: PDB Molecule:moba-related protein; PDBTitle: crystal structure of rv0371c from mycobacterium2 tuberculosis h37rv
96 | c3brkX_ |
| not modelled | 19.1 | 10 | PDB header:transferase Chain: X: PDB Molecule:glucose-1-phosphate adenylyltransferase; PDBTitle: crystal structure of adp-glucose pyrophosphorylase from2 agrobacterium tumefaciens
97 | d1h7ea_ |
| not modelled | 18.6 | 17 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:Cytidylytransferase
98 | c2qpqC_ |
| not modelled | 18.6 | 8 | PDB header:transport protein Chain: C: PDB Molecule:protein bug27; PDBTitle: structure of bug27 from bordetella pertussis
99 | d2alea1 |
| not modelled | 18.1 | 13 | Fold:Bacillus chorismate mutase-like Superfamily:L30e-like Family:L30e/L7ae ribosomal proteins

Binding site prediction |

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If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction |

Transmembrane helices have been predicted in your sequence to adopt the topology shown below

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
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Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0