BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (216 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P52106 Probable csgAB operon transcriptional regulatory... 444 e-124 UniRef50_B5XUA0 Transcriptional regulator, LuxR family n=5 Tax=K... 162 9e-39 UniRef50_A7K1C7 Transcriptional regulator VpsT n=3 Tax=Vibrio Re... 129 7e-29 UniRef50_D0I549 DNA-binding HTH domain-containing protein n=1 Ta... 128 1e-28 UniRef50_A6CUN0 Transcriptional regulator, LuxR family protein n... 122 1e-26 UniRef50_A4SSS5 Transcriptional regulator, LuxR family n=2 Tax=A... 119 7e-26 UniRef50_A5F0W0 Transcriptional regulator, LuxR family n=38 Tax=... 115 1e-24 UniRef50_B5FC84 Regulatory protein CsgD n=2 Tax=Vibrio fischeri ... 115 1e-24 UniRef50_A6FG26 Regulatory protein CsgD n=1 Tax=Moritella sp. PE... 114 2e-24 UniRef50_A5KYA7 Transcriptional regulator, LuxR family protein n... 112 8e-24 UniRef50_Q7MFD8 DNA-binding HTH domain-containing protein n=9 Ta... 109 6e-23 UniRef50_Q1QSA8 Transcriptional regulator, LuxR family n=1 Tax=C... 109 7e-23 UniRef50_Q7MFD7 DNA-binding HTH domain-containing protein n=12 T... 108 2e-22 UniRef50_Q1N2F1 Regulatory protein CsgD n=1 Tax=Bermanella maris... 106 5e-22 UniRef50_B6ENC4 Probable CsgAB operon transcriptional regulatory... 105 1e-21 UniRef50_A6B1A6 DNA-binding HTH domain-containing protein n=7 Ta... 104 2e-21 UniRef50_B9ZR28 Transcriptional regulator, LuxR family n=1 Tax=T... 102 1e-20 UniRef50_Q21M23 Regulatory protein, LuxR n=2 Tax=Alteromonadales... 101 2e-20 UniRef50_C9P2V2 DNA-binding HTH domain-containing protein n=2 Ta... 98 1e-19 UniRef50_A5F8S8 Transcriptional regulator, LuxR family n=31 Tax=... 97 4e-19 UniRef50_A4Y7X0 Transcriptional regulator, LuxR family n=21 Tax=... 92 9e-18 UniRef50_Q0VSH2 DNA-binding response regulator, LuxR family n=2 ... 92 2e-17 UniRef50_C5BEC2 Probable csgAB operon transcriptional regulatory... 87 4e-16 UniRef50_Q7MHB7 DNA-binding HTH domain-containing protein n=19 T... 85 2e-15 UniRef50_D0XHY9 Putative uncharacterized protein n=1 Tax=Vibrio ... 84 2e-15 UniRef50_A6W0K9 Response regulator receiver protein n=2 Tax=Gamm... 82 1e-14 UniRef50_D0ZA46 Putative uncharacterized protein n=1 Tax=Edwards... 81 2e-14 UniRef50_Q0VRG1 DNA-binding response regulator, LuxR family n=1 ... 81 3e-14 UniRef50_C7LUR5 Transcriptional regulator, LuxR family n=1 Tax=D... 80 5e-14 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 79 1e-13 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 78 2e-13 UniRef50_A0LDZ6 Transcriptional regulator, LuxR family n=1 Tax=M... 78 3e-13 UniRef50_D0YX60 Transcriptional regulator VpsT n=1 Tax=Photobact... 78 3e-13 UniRef50_A4VGJ9 DNA-binding response regulator CorR n=1 Tax=Pseu... 77 6e-13 UniRef50_P55184 Uncharacterized transcriptional regulatory prote... 75 2e-12 UniRef50_B7VRP3 Transcriptional regulator, LuxR family n=3 Tax=V... 75 2e-12 UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 74 3e-12 UniRef50_Q3ID65 Putative csg operon transcription regulator (Lux... 74 4e-12 UniRef50_B4RW68 Putative transcriptional regulator, LuxR family ... 74 5e-12 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 73 7e-12 UniRef50_A4VNF1 DNA-binding response regulator, LuxR family n=1 ... 73 9e-12 UniRef50_O07528 Uncharacterized transcriptional regulatory prote... 72 1e-11 UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibac... 72 1e-11 UniRef50_D1BCA8 Two component transcriptional regulator, LuxR fa... 71 2e-11 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 71 3e-11 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 70 4e-11 UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR fa... 70 4e-11 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 70 4e-11 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 70 6e-11 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 69 8e-11 UniRef50_C0Z4M7 Two-component response regulator n=7 Tax=Bacilla... 69 8e-11 UniRef50_B2J2N1 Two component transcriptional regulator, LuxR fa... 69 1e-10 UniRef50_A3Y699 Putative two component system response regulator... 69 2e-10 UniRef50_A4WZW6 Putative uncharacterized protein n=1 Tax=Rhodoba... 69 2e-10 UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa... 68 2e-10 UniRef50_D2SFS4 Two component transcriptional regulator, LuxR fa... 68 2e-10 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 68 2e-10 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 68 2e-10 UniRef50_Q3IJW5 Putative transcriptional regulator, LuxR family ... 68 2e-10 UniRef50_D1CI66 Two component transcriptional regulator, LuxR fa... 68 3e-10 UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa... 67 3e-10 UniRef50_A4TWP9 Response regulator containing a CheY-like receiv... 67 3e-10 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 67 3e-10 UniRef50_C1D4V7 Probable two-component response regulator n=1 Ta... 67 4e-10 UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 67 5e-10 UniRef50_D1BXU0 Two component transcriptional regulator, LuxR fa... 67 5e-10 UniRef50_D2S9C3 Two component transcriptional regulator, LuxR fa... 67 6e-10 UniRef50_A1SCE4 Response regulator receiver n=1 Tax=Nocardioides... 67 6e-10 UniRef50_A0JWK5 Transcriptional regulator, LuxR family n=3 Tax=A... 66 7e-10 UniRef50_Q397N7 ATP-dependent transcriptional regulator, MalT-li... 66 8e-10 UniRef50_C0WF90 Possible response regulator n=5 Tax=Corynebacter... 66 8e-10 UniRef50_C7MUJ2 Response regulator containing a CheY-like receiv... 66 8e-10 UniRef50_A4C982 Putative csg operon transcription regulator (Lux... 66 9e-10 UniRef50_B1VGA8 Two-component system response regulator n=15 Tax... 66 1e-09 UniRef50_C6PN74 ATP-dependent transcriptional regulator, MalT-li... 65 1e-09 UniRef50_B6IT53 Nitrate/nitrite response regulator protein NarL ... 65 1e-09 UniRef50_B5WAQ1 Two component transcriptional regulator, LuxR fa... 65 1e-09 UniRef50_C5C7H0 Response regulator containing a CheY-like receiv... 65 2e-09 UniRef50_C6PXX3 Two component transcriptional regulator, LuxR fa... 65 2e-09 UniRef50_A4PHL5 Putative two component regulator n=1 Tax=Strepto... 65 2e-09 UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Act... 64 2e-09 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 64 3e-09 UniRef50_Q0A822 Two component transcriptional regulator, LuxR fa... 64 3e-09 UniRef50_B9MPQ9 Two component transcriptional regulator, LuxR fa... 64 3e-09 UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus... 64 4e-09 UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=P... 64 4e-09 UniRef50_C7NKJ2 Response regulator containing a CheY-like receiv... 64 4e-09 UniRef50_B7GST9 Two component transcriptional regulator, LuxR fa... 64 4e-09 UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob... 64 4e-09 UniRef50_C9ZEX4 Putative respose regulatory protein n=1 Tax=Stre... 64 4e-09 UniRef50_B7KH54 Two component transcriptional regulator, LuxR fa... 64 4e-09 UniRef50_B4B795 Two component transcriptional regulator, LuxR fa... 64 5e-09 UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microsc... 64 5e-09 UniRef50_A9FBY9 Transcriptional regulatory protein n=2 Tax=Phaeo... 64 5e-09 UniRef50_C1TL62 Response regulator containing a CheY-like receiv... 64 5e-09 UniRef50_A8TBQ1 Regulatory protein CsgD n=3 Tax=Vibrio RepID=A8T... 64 5e-09 UniRef50_A6TKJ8 Two component transcriptional regulator, LuxR fa... 64 5e-09 UniRef50_A5G4S9 Response regulator receiver protein n=1 Tax=Geob... 63 6e-09 UniRef50_Q5NWK2 Putative uncharacterized protein n=1 Tax=Aromato... 63 6e-09 UniRef50_A3W9G2 Transcriptional regulator, LuxR family protein n... 63 6e-09 UniRef50_C1I7X4 Two-component system response regulator n=1 Tax=... 63 7e-09 UniRef50_A5V148 Two component transcriptional regulator, LuxR fa... 63 7e-09 UniRef50_Q07KU0 Two component transcriptional regulator, LuxR fa... 63 7e-09 UniRef50_A8M495 Two component transcriptional regulator, LuxR fa... 63 7e-09 UniRef50_Q0FEN9 DNA-binding response regulator, LuxR family prot... 63 8e-09 UniRef50_B1ZKW0 Two component transcriptional regulator, LuxR fa... 63 8e-09 UniRef50_Q0FFK6 DNA-binding response regulator, LuxR family prot... 63 9e-09 UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta... 63 9e-09 UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paeniba... 63 9e-09 UniRef50_B2A8K6 Two component transcriptional regulator, LuxR fa... 63 9e-09 UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Synt... 62 1e-08 UniRef50_B6IS42 Transcriptional regulator, LuxR family protein n... 62 1e-08 UniRef50_D1C1C8 Two component transcriptional regulator, LuxR fa... 62 1e-08 UniRef50_C1B6P0 Putative LuxR family transcriptional regulator n... 62 1e-08 UniRef50_B1WQK4 Two-component response regulator n=19 Tax=Cyanob... 62 1e-08 UniRef50_A4XVC8 Regulatory protein, LuxR n=7 Tax=Pseudomonas aer... 62 1e-08 UniRef50_B2IW90 Two component transcriptional regulator, LuxR fa... 62 1e-08 UniRef50_C4ZEG3 Two-component response regulator (Extracellular ... 62 1e-08 UniRef50_C6PMI5 Transcriptional regulator, LuxR family n=1 Tax=C... 62 1e-08 UniRef50_A5GTX7 Possible two component system response regulator... 62 1e-08 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 62 1e-08 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 62 1e-08 UniRef50_B8FX94 Two component transcriptional regulator, LuxR fa... 62 1e-08 UniRef50_D2Q428 Two component transcriptional regulator, LuxR fa... 62 1e-08 UniRef50_D1CF52 Two component transcriptional regulator, LuxR fa... 62 1e-08 UniRef50_C5CKC0 Two component transcriptional regulator, LuxR fa... 62 1e-08 UniRef50_A5CSF7 Putative two-component system, response regulato... 62 2e-08 UniRef50_B1HZD2 ComA, srfB, comAA; two-component response regula... 62 2e-08 UniRef50_D1CB75 Two component transcriptional regulator, LuxR fa... 62 2e-08 UniRef50_A8LG56 Two component transcriptional regulator, LuxR fa... 62 2e-08 UniRef50_C8W5L1 Transcriptional regulator, LuxR family n=1 Tax=D... 62 2e-08 UniRef50_C1YGP4 Response regulator containing a CheY-like receiv... 62 2e-08 UniRef50_Q24VY5 Putative uncharacterized protein n=2 Tax=Desulfi... 62 2e-08 UniRef50_C6CRD5 Transcriptional regulator, LuxR family n=1 Tax=P... 62 2e-08 UniRef50_C5C4U8 Two component transcriptional regulator, LuxR fa... 62 2e-08 UniRef50_A0K2K2 Two component transcriptional regulator, LuxR fa... 62 2e-08 UniRef50_A8KZP9 Two component transcriptional regulator, LuxR fa... 62 2e-08 UniRef50_A2SE70 ATP-dependent transcriptional regulator-like pro... 62 2e-08 UniRef50_C9XUR7 Putative HTH-type transcriptional regulator yhjB... 62 2e-08 UniRef50_C5CCY4 Response regulator containing a CheY-like receiv... 61 2e-08 UniRef50_Q0VLI2 Transcription regulator, putative n=1 Tax=Alcani... 61 2e-08 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 61 2e-08 UniRef50_C6CXC3 ATP-dependent transcriptional regulator, MalT-li... 61 2e-08 UniRef50_B4EJM2 Two-component regulatory system, response regula... 61 2e-08 UniRef50_B8K627 Sigma-70, region 4 family n=1 Tax=Vibrio parahae... 61 2e-08 UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa... 61 2e-08 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 61 2e-08 UniRef50_A5GK60 Possible two component system response regulator... 61 2e-08 UniRef50_C8UTK6 Two-component response regulator n=39 Tax=Bacill... 61 3e-08 UniRef50_Q21KE6 Transcriptional regulator, XRE family n=2 Tax=Pr... 61 3e-08 UniRef50_C4DRR3 Response regulator containing a CheY-like receiv... 61 3e-08 UniRef50_A6W5Y9 Two component transcriptional regulator, LuxR fa... 61 3e-08 UniRef50_Q7UVB4 Nitrate/nitrite regulatory protein narP n=1 Tax=... 61 3e-08 UniRef50_Q1AUM8 Two component transcriptional regulator, LuxR fa... 61 3e-08 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 60 4e-08 UniRef50_Q11XC0 Fimbrial Z protein; probable signal transducer n... 60 4e-08 UniRef50_A3VVX9 DNA-binding response regulator, LuxR family prot... 60 4e-08 UniRef50_A4SWC0 Two component transcriptional regulator, LuxR fa... 60 4e-08 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 60 4e-08 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 60 4e-08 UniRef50_A9WVF8 Two component response regulator n=1 Tax=Renibac... 60 4e-08 UniRef50_A9B845 Transcriptional regulator, LuxR family n=1 Tax=H... 60 4e-08 UniRef50_A1ARF4 Transcriptional regulator, LuxR family n=1 Tax=P... 60 4e-08 UniRef50_A4TWP7 Response regulator containing a CheY-like receiv... 60 4e-08 UniRef50_B9JKP6 Two-component response regulator protein n=2 Tax... 60 4e-08 UniRef50_A8UHM3 Two-component response regulator n=1 Tax=Flavoba... 60 4e-08 UniRef50_D1BX47 Two component transcriptional regulator, LuxR fa... 60 4e-08 UniRef50_A0QPA5 Transcriptional regulator, LuxR family protein n... 60 4e-08 UniRef50_A1RC88 Two-component system response regulator n=8 Tax=... 60 4e-08 UniRef50_C8NX57 Two component system response regulator n=1 Tax=... 60 4e-08 UniRef50_C5RKV5 ATP-dependent transcriptional regulator, MalT-li... 60 5e-08 UniRef50_D1B9T1 Two component transcriptional regulator, LuxR fa... 60 5e-08 UniRef50_C0GHS5 Two component transcriptional regulator, LuxR fa... 60 5e-08 UniRef50_A9U739 Predicted protein n=2 Tax=cellular organisms Rep... 60 5e-08 UniRef50_Q0S3P7 Response regulator, two-component system n=11 Ta... 60 5e-08 UniRef50_B1ZY58 Two component transcriptional regulator, LuxR fa... 60 5e-08 UniRef50_B4D831 Two component transcriptional regulator, LuxR fa... 60 5e-08 UniRef50_B2A6W2 Two component transcriptional regulator, LuxR fa... 60 6e-08 UniRef50_B8EIF2 Two component transcriptional regulator, LuxR fa... 60 6e-08 UniRef50_Q1ZGB3 Nitrate/nitrite response regulator protein NarP ... 60 6e-08 UniRef50_P54794 Monoamine regulon transcriptional regulator n=50... 60 6e-08 UniRef50_D2RAN9 Response regulator receiver domain protein n=17 ... 60 6e-08 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 60 6e-08 UniRef50_A6GST5 Response regulator containing a CheY-like receiv... 60 6e-08 UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR fa... 60 7e-08 UniRef50_UPI0001C3195F two component transcriptional regulator, ... 60 7e-08 UniRef50_B9JNF6 Transcriptional regulator protein n=1 Tax=Agroba... 60 7e-08 UniRef50_C5VFN2 Two component transcriptional regulator, LuxR fa... 60 7e-08 UniRef50_Q5P3L2 Nitrate/nitrite TWO-component response regulator... 60 7e-08 UniRef50_C6BJ98 Two component transcriptional regulator, LuxR fa... 60 7e-08 UniRef50_A1VHR5 Two component transcriptional regulator, LuxR fa... 59 8e-08 UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphy... 59 8e-08 UniRef50_UPI0001AF0F26 two-component system response regulator n... 59 8e-08 UniRef50_Q0AL13 Two component transcriptional regulator, LuxR fa... 59 8e-08 UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob... 59 8e-08 UniRef50_B9CLG1 Transcriptional regulator, LuxR family protein n... 59 8e-08 UniRef50_A5UQJ6 Response regulator receiver protein n=1 Tax=Rose... 59 9e-08 UniRef50_A7NFQ1 Transcriptional regulator, LuxR family n=1 Tax=R... 59 9e-08 UniRef50_B1YYJ9 Transcriptional regulator, LuxR family n=4 Tax=B... 59 9e-08 UniRef50_Q7NJN3 Gsr1799 protein n=1 Tax=Gloeobacter violaceus Re... 59 9e-08 UniRef50_C4DNP2 Response regulator containing a CheY-like receiv... 59 9e-08 UniRef50_B5JFN7 Response regulator receiver domain protein n=1 T... 59 9e-08 UniRef50_Q2W650 Response regulator containing a CheY-like receiv... 59 9e-08 UniRef50_D1SAH8 Two component transcriptional regulator, LuxR fa... 59 9e-08 UniRef50_A3D8B4 Transcriptional regulator, LuxR family n=21 Tax=... 59 9e-08 UniRef50_C5C8Q1 Response regulator containing a CheY-like receiv... 59 9e-08 UniRef50_C1BB72 Putative LuxR family transcriptional regulator n... 59 1e-07 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 59 1e-07 UniRef50_B8G436 Transcriptional regulator, LuxR family n=3 Tax=C... 59 1e-07 UniRef50_C3JUJ7 Transcriptional regulatory protein DegU n=2 Tax=... 59 1e-07 UniRef50_UPI0001789C57 two component transcriptional regulator, ... 59 1e-07 UniRef50_B8IGA6 Two component transcriptional regulator, LuxR fa... 59 1e-07 UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=M... 59 1e-07 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 59 1e-07 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 59 1e-07 UniRef50_A4FB05 Two component system response regulator n=43 Tax... 59 1e-07 UniRef50_C4DM80 Response regulator containing a CheY-like receiv... 59 1e-07 UniRef50_C8X7K8 Transcriptional regulator, LuxR family n=1 Tax=N... 59 1e-07 UniRef50_D2SB03 Two component transcriptional regulator, LuxR fa... 59 1e-07 UniRef50_Q7NCA4 LuxR family transcriptional regulatory protein n... 59 1e-07 UniRef50_Q2SM19 ATP-dependent transcriptional regulator n=1 Tax=... 59 1e-07 UniRef50_Q47NW9 Regulatory protein, LuxR:Response regulator rece... 59 1e-07 UniRef50_A3TM12 Putative respose regulatory protein n=2 Tax=Micr... 59 1e-07 UniRef50_C1XS11 Response regulator containing a CheY-like receiv... 59 1e-07 UniRef50_A1TJW9 Two component transcriptional regulator, LuxR fa... 59 1e-07 UniRef50_Q2T516 Transcriptional regulator, LuxR family n=52 Tax=... 59 1e-07 UniRef50_C7MRK0 Response regulator containing a CheY-like receiv... 59 1e-07 UniRef50_Q1NFH9 Probable transcriptional regulator n=1 Tax=Sphin... 59 2e-07 UniRef50_A5FIE9 Two component transcriptional regulator, LuxR fa... 59 2e-07 UniRef50_B8IQE3 Transcriptional regulator, LuxR family n=1 Tax=M... 59 2e-07 UniRef50_B5G749 Two-component system response regulator n=1 Tax=... 59 2e-07 UniRef50_Q1AZV4 Two component transcriptional regulator, LuxR fa... 59 2e-07 UniRef50_B9K0P0 Two component response regulator n=1 Tax=Agrobac... 59 2e-07 UniRef50_D0X6W6 Putative uncharacterized protein n=1 Tax=Vibrio ... 59 2e-07 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 58 2e-07 UniRef50_C1B8T3 NarL family two-component response regulator n=6... 58 2e-07 UniRef50_A4J308 Response regulator receiver protein n=1 Tax=Desu... 58 2e-07 UniRef50_A1AXR1 Two component transcriptional regulator, LuxR fa... 58 2e-07 UniRef50_C5BYP8 ATP-dependent transcriptional regulator, MalT-li... 58 2e-07 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 58 2e-07 UniRef50_D1C9R5 Two component transcriptional regulator, LuxR fa... 58 2e-07 UniRef50_A1VT42 Two component transcriptional regulator, LuxR fa... 58 2e-07 UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacill... 58 2e-07 UniRef50_P37640 Putative HTH-type transcriptional regulator yhjB... 58 2e-07 UniRef50_B6IU89 Glycerol metabolism activator AgmR n=1 Tax=Rhodo... 58 2e-07 UniRef50_Q5WJ71 Two-component response regulator n=5 Tax=Bacilla... 58 2e-07 UniRef50_Q12AU1 Two component transcriptional regulator, LuxR fa... 58 2e-07 UniRef50_B4WJL3 Response regulator receiver domain protein n=1 T... 58 2e-07 UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeoba... 58 2e-07 UniRef50_Q5QXH3 Response regulator, LuxR family (CheY-HTH) n=1 T... 58 2e-07 >UniRef50_P52106 Probable csgAB operon transcriptional regulatory protein n=102 Tax=Enterobacteriaceae RepID=CSGD_ECOLI Length = 216 Score = 444 bits (1142), Expect = e-124, Method: Compositional matrix adjust. Identities = 216/216 (100%), Positives = 216/216 (100%) Query: 1 MFNEVHSIHGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGSIILLDM 60 MFNEVHSIHGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGSIILLDM Sbjct: 1 MFNEVHSIHGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGSIILLDM 60 Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG Sbjct: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 Query: 121 LQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL 180 LQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL Sbjct: 121 LQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL 180 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR 216 FISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR Sbjct: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR 216 >UniRef50_B5XUA0 Transcriptional regulator, LuxR family n=5 Tax=Klebsiella RepID=B5XUA0_KLEP3 Length = 217 Score = 162 bits (409), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 85/206 (41%), Positives = 132/206 (64%), Gaps = 10/206 (4%) Query: 15 LITKSSLQATALLQHLKQSLAITGKLHNIQRSLDD-ISSGSIILLDMMEADKKLIHYWQD 73 IT S+Q+ A +L ++L L NI + L ++ S+IL D+ ++KKL W+D Sbjct: 16 FITHPSIQSKAFASYLSETLMAPVVLQNINKPLAQRLAKDSVILFDIAVSNKKLNGVWRD 75 Query: 74 TLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQ 133 + + +N ++L++N+ + Y ++ WP + GVF +D+ R++ G++ VL GE Sbjct: 76 IIRLQADNPRLLIINSAQKYELYEMAQWPALYGVFRHDDDESRLIEGVKAVLNGE----- 130 Query: 134 KLASYLITHSGNYRYN----STESALLTHREKEILNKLRIGASNNEIARSLFISENTVKT 189 + A + H Y + E++ LT RE EILN+LR GA+N +IAR+LFISENTV+T Sbjct: 131 QTAELSVMHPAMYAADHASAPVENSPLTERECEILNELRCGATNLDIARALFISENTVRT 190 Query: 190 HLYNLFKKIAVKNRTQAVSWANDNLR 215 HLYN+F+K++VKNRTQAVSWAN++LR Sbjct: 191 HLYNVFRKLSVKNRTQAVSWANEHLR 216 >UniRef50_A7K1C7 Transcriptional regulator VpsT n=3 Tax=Vibrio RepID=A7K1C7_VIBSE Length = 222 Score = 129 bits (324), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 78/208 (37%), Positives = 125/208 (60%), Gaps = 7/208 (3%) Query: 13 LLLITKSSLQATALLQHLKQSLAITGKL----HNIQRSLDDISSGSIILLDMMEADKKLI 68 ++LIT+ SLQ++ L L+ L I+ L IQ +LD + +II+ + D+ Sbjct: 9 VILITEGSLQSSLLKDVLETKLGISVALIIPDSLIQGALDSPLASAIIVDCSVITDEIFR 68 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 Y + S++ + ++IL+ N + D+ W + G+FY+ +D + + G+ VL+G+ Sbjct: 69 RYSEFKESQQKDTLEILI-NCDQSISTEDLFAWRTLAGIFYTSDDIKTLQVGIDKVLKGD 127 Query: 129 CYFTQKLASYLITHSGNY--RYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 +F++K + ITH + N A+LT REK+I+ L +GASN +IA LF+SENT Sbjct: 128 MWFSRKFSQQYITHLRRHCKPINKNVPAILTKREKQIITFLSMGASNQQIAEQLFVSENT 187 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDNL 214 VKTHL+N+FKKI VKNR QA+ WA +N+ Sbjct: 188 VKTHLHNIFKKIEVKNRVQALIWAKENI 215 >UniRef50_D0I549 DNA-binding HTH domain-containing protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I549_VIBHO Length = 224 Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 77/206 (37%), Positives = 124/206 (60%), Gaps = 3/206 (1%) Query: 11 HTLLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGS-IILLDMMEADKKLIH 69 +T+LL+++ S+ TAL+ L++ + L Q+ + +S+ S ++L+D+ + + Sbjct: 11 YTILLVSEPSMTITALISCLEKEIRSAVSLVEKQQISEKLSTSSGLVLIDLSAFEGDTVG 70 Query: 70 YWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGEC 129 + + +L+ + L N D +++ +WP I GVF +D E + +G++ +L GE Sbjct: 71 FVKQSLAPFSEQHVFALFNA-HDLSAKELASWPFIKGVFKKEDDLEHLCHGIEKMLSGEY 129 Query: 130 YFT-QKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVK 188 + QKLA + + N LT+RE++IL KL GASN+EIA SLF+SE+TVK Sbjct: 130 WLPRQKLAELIHYYQQNNNNIDYSEICLTNREQQILRKLVTGASNSEIADSLFVSEHTVK 189 Query: 189 THLYNLFKKIAVKNRTQAVSWANDNL 214 +HLYN+FKKI VKNR QAV WA +NL Sbjct: 190 SHLYNIFKKINVKNRVQAVFWAKNNL 215 >UniRef50_A6CUN0 Transcriptional regulator, LuxR family protein n=2 Tax=Vibrio shilonii AK1 RepID=A6CUN0_9VIBR Length = 227 Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 76/219 (34%), Positives = 125/219 (57%), Gaps = 13/219 (5%) Query: 3 NEVHSIHGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQ---RSLDDISSGSI--IL 57 N VH+ LL+ ++SLQ+ L ++Q + IT +L + + RS DD+ + I+ Sbjct: 8 NNVHA------LLLAENSLQSGLLKDSIEQKVPITIRLMSAEKLYRSRDDVVERDVRFII 61 Query: 58 LDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERV 117 +D ++ + + +N+IK +LLN P + + ++ W ++ GVFY+ + E + Sbjct: 62 IDYAAIGHGTATHYHEIIESMDNSIKEILLNAPSNLEHAEMLKWQNLVGVFYASDTIETL 121 Query: 118 VNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTES--ALLTHREKEILNKLRIGASNNE 175 V+G + +L GE + ++KL + + + T LT RE++I+ L GASN E Sbjct: 122 VSGFERILAGELWMSRKLVYEYVNFYRRRQCSKTSPYYTKLTKREQQIIKLLGDGASNTE 181 Query: 176 IARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 IA +LF+SENTVK HL+N FKKI VKNR QA+ W +N+ Sbjct: 182 IADTLFVSENTVKAHLHNAFKKIKVKNRLQALLWVKNNI 220 >UniRef50_A4SSS5 Transcriptional regulator, LuxR family n=2 Tax=Aeromonas RepID=A4SSS5_AERS4 Length = 200 Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 19/207 (9%) Query: 13 LLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGSIILLDMMEADKKLIHYWQ 72 ++L+T++++QAT+ +L + LA+ L D S + L+D+ W Sbjct: 8 VVLVTENNVQATSFQSYLAEQLALPILL-------DGRESHPLFLVDLDYLKSSQQSGWP 60 Query: 73 DTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFT 132 +S + +LLN P + WPH +G+F+ Q+R+V G++ VL+GE + Sbjct: 61 REISSRFGEANTILLNAPTSTDRELLLMWPHTSGLFFR---QDRLVLGIRKVLQGEYWIP 117 Query: 133 QKLASYLITHSGNYRYNSTE-----SALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 + L L+ NY E LLT RE+EI+ L GASN EIA SLF+SE+T+ Sbjct: 118 RHLLCDLV----NYYRKGGEHHLRNQTLLTAREQEIIRYLMTGASNTEIADSLFVSEHTI 173 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDNL 214 K+HLYN+FKK+ V+NR QAVSWA + L Sbjct: 174 KSHLYNVFKKLNVRNRLQAVSWAKEYL 200 >UniRef50_A5F0W0 Transcriptional regulator, LuxR family n=38 Tax=Vibrio RepID=A5F0W0_VIBC3 Length = 224 Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 88/134 (65%), Gaps = 2/134 (1%) Query: 83 KILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITH 142 K +++N P+D ++ + W ++ GVFY +D + ++ G+ +L+ E + T+KLA I H Sbjct: 84 KEVIINCPQDIEHKLLFKWNNLAGVFYIDDDMDTLIKGMSKILQDEMWLTRKLAQEYILH 143 Query: 143 --SGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAV 200 +GN S A LT RE++I+ L GASN EIA LF+SENTVKTHL+N+FKKI Sbjct: 144 YRAGNSVVTSQMYAKLTKREQQIIKLLGSGASNIEIADKLFVSENTVKTHLHNVFKKINA 203 Query: 201 KNRTQAVSWANDNL 214 KNR QA+ WA +N+ Sbjct: 204 KNRLQALIWAKNNI 217 >UniRef50_B5FC84 Regulatory protein CsgD n=2 Tax=Vibrio fischeri RepID=B5FC84_VIBFM Length = 214 Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 78/203 (38%), Positives = 119/203 (58%), Gaps = 25/203 (12%) Query: 15 LITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGSIILLDMM-EADKKLIHYWQD 73 L+ KSS QA L L GK+ DDI +++LD+ + DKK +Y D Sbjct: 20 LLEKSSGQAIVSLNC--DELVNKGKVD------DDI----LVILDIKKQTDKKYKNYI-D 66 Query: 74 TLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQ 133 T++R ++ +L N ++ ++I +P++ GVFY ++ + + G++ ++ GE + ++ Sbjct: 67 TINRNKLKVREILFNITDENIKKNIMKYPNVVGVFYEKDNMDVISYGVKKIIEGEMWLSR 126 Query: 134 KLASYLITHSGNYRYNSTESALL------THREKEILNKLRIGASNNEIARSLFISENTV 187 K+ + LI + Y +SA+L T RE EIL L GASN +IA SLF+SENTV Sbjct: 127 KIINELI-----FAYREKQSAILSTSISLTTRESEILRLLASGASNVDIANSLFVSENTV 181 Query: 188 KTHLYNLFKKIAVKNRTQAVSWA 210 KTHLYN+FKK+ VKNR QA+ WA Sbjct: 182 KTHLYNVFKKLNVKNRLQAMMWA 204 >UniRef50_A6FG26 Regulatory protein CsgD n=1 Tax=Moritella sp. PE36 RepID=A6FG26_9GAMM Length = 230 Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 72/208 (34%), Positives = 118/208 (56%), Gaps = 9/208 (4%) Query: 13 LLLITKSSLQATALLQHLKQSLAITGK----LHNIQR-SLDDISSGSIILLDMMEADKKL 67 ++L+++ SLQ L+ L+ L I + + I+R S+DD ++L+D Sbjct: 25 VVLLSQPSLQVATLVSCLRAKLDIPVQQLREVAEIERISIDD---NLLLLVDTDNLSATS 81 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 ++ L + + ++ L+N +D +I WP I GVF ++ + V G+Q + G Sbjct: 82 QEQLKNKLKQYHGMFRLALINLSDDTTMENISTWPSIFGVFNKRDELDVVCKGIQKITEG 141 Query: 128 ECYFTQKLASYLIT-HSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 E + ++ S LI+ + + LT RE+EIL +L G+SN EIA +L++SE+T Sbjct: 142 EFWMPRRTLSSLISIYRSTKAVDLDRKPELTTREQEILRQLMTGSSNLEIADALYVSEHT 201 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDNL 214 +K+HLYN+FKKI VKNR QAVSWA ++L Sbjct: 202 IKSHLYNVFKKIKVKNRLQAVSWAKESL 229 >UniRef50_A5KYA7 Transcriptional regulator, LuxR family protein n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KYA7_9GAMM Length = 178 Score = 112 bits (281), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 57/162 (35%), Positives = 98/162 (60%), Gaps = 2/162 (1%) Query: 55 IILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQ 114 ++++D K+ +Q+ +++ +LLNTP D+P+ ++ W ++ G+FY+ + Sbjct: 10 LVIIDYPTMSKQYTEKYQELRDDIESDVHEVLLNTPSDFPHSEMLKWQYLVGIFYASDTL 69 Query: 115 ERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALL--THREKEILNKLRIGAS 172 +++V G +L+GE + ++KL I+ + T L T RE++I+ L GAS Sbjct: 70 DKLVTGFNCILQGEMWMSRKLIYQYISFYRERQCAKTSPYYLKLTKREQQIIKLLGDGAS 129 Query: 173 NNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 N +IA +L++SENTVK HL+N FKKI VKNR QA+ W +N+ Sbjct: 130 NTQIADTLYVSENTVKAHLHNTFKKIKVKNRLQALIWVKNNV 171 >UniRef50_Q7MFD8 DNA-binding HTH domain-containing protein n=9 Tax=Vibrio RepID=Q7MFD8_VIBVY Length = 224 Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 71/210 (33%), Positives = 120/210 (57%), Gaps = 11/210 (5%) Query: 13 LLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDD----ISSGSIILLDMMEADKKLI 68 ++LIT+ SLQ++ L + L++ L + L + LD+ SS IL+D ++ Sbjct: 11 VILITEDSLQSSLLKEILEKKLNMVVHLLT-PKELDERTTSYSSIKAILVDYSVVEEDFY 69 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 + + + + ++ +L+N D ++ W + G+FY +D + G+ +L G+ Sbjct: 70 SSYLNFIDENFSEVQEVLINCQNDISIEELCIWRSLTGIFYLSDDISTLELGIDKILSGD 129 Query: 129 CYFTQKLASYLIT----HSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISE 184 +F++K++ I+ HS + T S LT RE++I+ L +G SN +IAR LF+ E Sbjct: 130 MWFSRKISQEFISTLRQHSKPI--SKTVSTKLTKREQQIITLLSLGNSNQQIARKLFVRE 187 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 NTVKTHL+N+FKKI VKNR QA+ WA ++L Sbjct: 188 NTVKTHLHNIFKKIDVKNRVQALIWAKEHL 217 >UniRef50_Q1QSA8 Transcriptional regulator, LuxR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QSA8_CHRSD Length = 238 Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 114/212 (53%), Gaps = 7/212 (3%) Query: 7 SIHGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQRS-LDDISSGSIILLDMMEADK 65 S+ +L++T + Q+ + +++Q L + Q S + ++LLD D+ Sbjct: 13 SLENARVLMVTDCNPQSQLFIDYVRQQLDCQVSALSTQESFVPPADRKVVVLLDADHVDE 72 Query: 66 KLIHYWQDTLSRKNNNIKILL--LNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 +H W SR + + +++L N +D ++ H+ GVFY ++ + G+ Sbjct: 73 NCMHLWN---SRASESPEMILAAFNLRDDEHAAELLISLHLQGVFYRQDNLLLICKGIAK 129 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTESAL-LTHREKEILNKLRIGASNNEIARSLFI 182 +L G+ + ++ L + LI + N+ LTHRE EI+ L GASN EIA LF+ Sbjct: 130 LLEGDLWMSRNLMTRLIDFYRRQQLNAYRPVCGLTHRELEIIGLLGTGASNTEIADQLFV 189 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 SE+TVK+HLYN+F+KI V NR QA++WA NL Sbjct: 190 SEHTVKSHLYNIFRKIKVHNRIQAMNWARQNL 221 >UniRef50_Q7MFD7 DNA-binding HTH domain-containing protein n=12 Tax=Vibrio RepID=Q7MFD7_VIBVY Length = 219 Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 124/209 (59%), Gaps = 9/209 (4%) Query: 12 TLLLITKSSLQATALLQHLKQSLAITGKLHNIQRSL--DDISSGSIILLDMMEADKKLIH 69 T++L+T+ SLQ+ L L +T ++ + ++ + + I++ SI+L+D+ D + + Sbjct: 14 TIVLVTQQSLQSENLKNILMAETGMTIEILDAKKPISKERINAESILLVDL-SVDISMDN 72 Query: 70 YWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGEC 129 D + + + +LLN ED ++ WP+I GVF + ++ E++ G++ + RG+ Sbjct: 73 I--DIIKNRGDLRGTILLNLLEDLEPEELIKWPYIKGVFGAKDNIEKLCRGIEAIARGDN 130 Query: 130 YFTQKLASYLITH----SGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 + ++L LI++ G + LT RE ++L L+ G SN EIA SLFISE+ Sbjct: 131 WLPRRLMMQLISYYEEKGGAKKEEPQLDIELTRREIQVLQFLKAGGSNMEIADSLFISEH 190 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 T+K+HLYN+F+KI VKNRTQA +WA NL Sbjct: 191 TIKSHLYNIFRKIDVKNRTQATAWAKRNL 219 >UniRef50_Q1N2F1 Regulatory protein CsgD n=1 Tax=Bermanella marisrubri RepID=Q1N2F1_9GAMM Length = 216 Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 112/207 (54%), Gaps = 10/207 (4%) Query: 13 LLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDD--ISSGSIILLDMMEADKKLIHY 70 L L+ ++Q + LL L+Q L + + R D+ I +I +D M + Sbjct: 9 LWLVGPKNIQNSLLLGFLQQHLQMDCSMLENYRPADNHKIKLPHLICVDAMGMRAENCRQ 68 Query: 71 WQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECY 130 ++L + N +++ +N Y ++ WP+++G FY Q V G++ +LRGE + Sbjct: 69 MLESLPKDN---QVVFINLDGQQSYDELLKWPNVSGFFYKGASQNHVSKGIRSILRGELW 125 Query: 131 FTQKLASYLITHSGNYRYNSTESAL---LTHREKEILNKLRIGASNNEIARSLFISENTV 187 F++++ S + + N R + E LT RE +IL+ GA N +IA +L +S +TV Sbjct: 126 FSRRILSQFM--ANNRRPPAPEQKPAHNLTRRESQILSLSASGAKNADIAAALNVSTHTV 183 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDNL 214 KTH+YNLFKK+ V NR QAV+WA + L Sbjct: 184 KTHMYNLFKKLDVSNRIQAVNWAKEYL 210 >UniRef50_B6ENC4 Probable CsgAB operon transcriptional regulatory protein n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6ENC4_ALISL Length = 215 Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 62/161 (38%), Positives = 98/161 (60%), Gaps = 9/161 (5%) Query: 55 IILLDMM-EADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMED 113 +++LD + DKK Y +++ +K +L N + ++I +P + GVFY ++ Sbjct: 49 LVILDFKNQTDKKYKQYLS-VITKYKLKVKEILFNVTNENITKNIMRYPSVVGVFYEKDN 107 Query: 114 QERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNS----TESALLTHREKEILNKLRI 169 + + G++ ++ GE + ++K+ + LI+ YR T S LT REKEIL L + Sbjct: 108 VDVISEGVKKIIDGEMWLSRKITNDLISI---YRSKQNGILTSSVSLTTREKEILKLLSL 164 Query: 170 GASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 GASN +IA +LF+SENTVKTHL+N+FKK+ VKNR QA+ W Sbjct: 165 GASNIDIANTLFVSENTVKTHLHNVFKKLNVKNRLQAMIWT 205 >UniRef50_A6B1A6 DNA-binding HTH domain-containing protein n=7 Tax=Vibrio RepID=A6B1A6_VIBPA Length = 217 Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/148 (39%), Positives = 93/148 (62%), Gaps = 5/148 (3%) Query: 72 QDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYF 131 + TLS+ + +L+N + + W ++ G+FY +D ++V+ GL+G+L GE + Sbjct: 69 KQTLSKLEHVDATVLVNAEPNLRIESLLTWSNLKGLFYFEDDFDKVMMGLKGILNGENWL 128 Query: 132 TQKLASYLITH--SGNYRYNSTESAL---LTHREKEILNKLRIGASNNEIARSLFISENT 186 ++ + + LI H S N E+ L LT RE ++L+ L G SN +IA SLF+SE+T Sbjct: 129 SRDILNQLIGHLLSLNNTVGELETKLEMELTRREMQVLSALCQGGSNLDIADSLFVSEHT 188 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDNL 214 VK+HLY++F+K+ VKNR QA++WA NL Sbjct: 189 VKSHLYSIFRKLEVKNRMQAITWAKRNL 216 >UniRef50_B9ZR28 Transcriptional regulator, LuxR family n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZR28_9GAMM Length = 232 Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 67/206 (32%), Positives = 113/206 (54%), Gaps = 6/206 (2%) Query: 13 LLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISSGSIILLDMMEADKKLIHY 70 +L++T +S Q+ ++++ K ++TG + + S+ L D D++ I + Sbjct: 10 VLIVTSASPQSALFIEYVSEKTKCSVTGLEPGSPKVAQTLRDYSLALFDASALDERDIGH 69 Query: 71 WQDTLSRKNNNIKILLLNTP-EDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGEC 129 Q ++ + N P ED R ++ ++ G+FY + + + G+ +L G+ Sbjct: 70 VQQAVADGAKTV-FAGFNIPNEDEALRLLDVL-YLQGIFYKTDQLDLLCKGILCLLNGDF 127 Query: 130 YFTQKLASYLITHSGNYRYNSTESAL-LTHREKEILNKLRIGASNNEIARSLFISENTVK 188 + ++ L + L+ R N+ A LT RE EIL L G +N IA+ LFISE+TVK Sbjct: 128 WMSRHLMTRLVRLYRQQRTNTYRPACGLTQRELEILAMLGSGETNMNIAKQLFISEHTVK 187 Query: 189 THLYNLFKKIAVKNRTQAVSWANDNL 214 +HLYN+F+KI VKNRTQA++WA D+L Sbjct: 188 SHLYNIFRKIEVKNRTQAINWAKDHL 213 >UniRef50_Q21M23 Regulatory protein, LuxR n=2 Tax=Alteromonadales RepID=Q21M23_SACD2 Length = 221 Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 110/203 (54%), Gaps = 9/203 (4%) Query: 14 LLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGS-IILLDMMEADKKLIHYWQ 72 L KSSLQ L + + L + ++ ++L DI S ++L+D D + Sbjct: 17 LCSPKSSLQTGLLAKLIADELKLDCTVY---KALKDIPSAPRVLLIDCQGQDIAALRDIA 73 Query: 73 DTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFT 132 +++ LLN + I +WP ++G+FY DQ++++ GLQ +L G+ + Sbjct: 74 HAYHEQHSEGTAALLNAEYASEHESILDWPCMSGIFYVDSDQQQLIRGLQCLLDGDYWVP 133 Query: 133 QKLASYLITHSGNYRYNST---ESALLTHREKEILNKLRIGASNNEIARSLFISENTVKT 189 ++L + + N R S LT RE++IL ++ GA+N +I+ +L +SE+TVK+ Sbjct: 134 RRLLHHFL--DKNRRAPSKVAHPDVKLTRRERQILKLIKDGATNADISTALKVSEHTVKS 191 Query: 190 HLYNLFKKIAVKNRTQAVSWAND 212 HLYN++KKI V+NR +A +W D Sbjct: 192 HLYNVYKKIGVRNRLEASNWVRD 214 >UniRef50_C9P2V2 DNA-binding HTH domain-containing protein n=2 Tax=Vibrio RepID=C9P2V2_VIBME Length = 216 Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 61/169 (36%), Positives = 103/169 (60%), Gaps = 10/169 (5%) Query: 51 SSGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYS 110 S I+LLD D + I + L + ++ +L N + P + ++ ++ G+FY Sbjct: 51 SKHKILLLDYQ--DHRTIRHRLGPLKLTTHYLETILFNVDKRLPTDLLISFGNLKGLFYQ 108 Query: 111 MEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRY----NSTESAL-LTHREKEILN 165 + E++ +GL ++ G+ + + +++ L+ H +RY T++ L LT RE +IL Sbjct: 109 TDSAEQLSHGLAQIINGQNWLPRHVSNQLLHH---FRYAFHEQHTKATLDLTVREIQILR 165 Query: 166 KLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 L+ ASN++IA++LFISE TVK+HLY ++KK+AVKNR QA+SWAN +L Sbjct: 166 CLQAQASNDDIAKNLFISELTVKSHLYQIYKKLAVKNRAQAISWANHHL 214 >UniRef50_A5F8S8 Transcriptional regulator, LuxR family n=31 Tax=Vibrio RepID=A5F8S8_VIBC3 Length = 214 Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 60/163 (36%), Positives = 95/163 (58%), Gaps = 6/163 (3%) Query: 55 IILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQ 114 I+LLD A+ LI L + + +L N + D+ + ++ G+FY+ ED Sbjct: 54 ILLLD--HAENGLIRQQLGPLKLTSPYFETILFNVEKRLRTEDLLTFGNLKGLFYANEDT 111 Query: 115 ERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTE---SALLTHREKEILNKLRIGA 171 + +GL ++ G+ + + ++S L+ H Y + S + + LT RE +IL L+ GA Sbjct: 112 GFIAHGLGEIINGQNWLPRHVSSQLL-HYYRYAFQSHQVQATVDLTAREIQILRCLQTGA 170 Query: 172 SNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 SN +IA +LFISE TVK+HLY +FKK+ VKNR +A++W N NL Sbjct: 171 SNMQIAENLFISEFTVKSHLYQIFKKLNVKNRVKAIAWVNQNL 213 >UniRef50_A4Y7X0 Transcriptional regulator, LuxR family n=21 Tax=Shewanella RepID=A4Y7X0_SHEPC Length = 211 Score = 92.4 bits (228), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 52/162 (32%), Positives = 91/162 (56%), Gaps = 4/162 (2%) Query: 53 GSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSME 112 S++++D+ D + + +Q +L+R++ +++++ + P+ R + GVFY Sbjct: 49 ASMVVIDLATVDLQKAYQFQRSLAREHPSVRVVYIQFPKQVDARFLTQSATTAGVFYLDA 108 Query: 113 DQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGAS 172 + GL +LRG +L + + G + TE LT RE+E+L L G++ Sbjct: 109 GIAEISLGLSNILRGHRVIPMQLINGVNDDFG--LFEDTEP--LTIREREVLQALLSGST 164 Query: 173 NNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 N +IA LF+SE+T+KTHLY +F+KI V +R QA++WA L Sbjct: 165 NLDIANQLFVSESTIKTHLYRVFRKIGVSSRGQAIAWAQTYL 206 >UniRef50_Q0VSH2 DNA-binding response regulator, LuxR family n=2 Tax=Alcanivorax RepID=Q0VSH2_ALCBS Length = 216 Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 92/161 (57%), Gaps = 14/161 (8%) Query: 56 ILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQE 115 ++ ++EAD+++ +++ I + N D + P +NG F Q Sbjct: 68 VIAHLLEADQEV-----------ESDVLIAVFNVDSDESLSKLAGLPMVNGGFQHDCPQA 116 Query: 116 RVVNGLQGVLRGECYFTQK-LASYLI-THSGNYRYNSTESALLTHREKEILNKLRIGASN 173 + GL+ +L GE +F + L +YL+ + + N ++ +E +L T RE E+L + GA N Sbjct: 117 LLSKGLKAILDGELWFPRAVLQTYLMKSRTFNKTFSRSEVSL-TDREVEVLKVMATGAKN 175 Query: 174 NEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 ++IA SL +S +T+KTH+YN+FKKI NR QAV+WA +NL Sbjct: 176 SDIACSLNLSPHTIKTHIYNIFKKINASNRLQAVNWAQENL 216 >UniRef50_C5BEC2 Probable csgAB operon transcriptional regulatory protein n=1 Tax=Edwardsiella ictaluri 93-146 RepID=C5BEC2_EDWI9 Length = 206 Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 66/208 (31%), Positives = 108/208 (51%), Gaps = 23/208 (11%) Query: 13 LLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDI-SSGSIILLDMM--EADKKLIH 69 L LIT +LQ+ L+ L L + L + R+ + + S+I+ D M + D Sbjct: 14 LSLITYPTLQSMLLVDVLNNYLGVPICLCDATRNSNYLLGDCSLIIFDTMLLDGDPTQRA 73 Query: 70 YWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPH---INGVFYSMEDQERVVNGLQGVLR 126 W + + + +I+L+N Y ++ W I VF + Q+ ++ L+ +L Sbjct: 74 CWLEAIFNRRVGPRIILINVGT---YDEVLAWCQHGNIIAVFPAKTHQQALIRRLRTLLM 130 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 ++ Y+ T + LT RE E+L ++ GASN +I+R L+IS+NT Sbjct: 131 AA---QEEGPGYM-----------TPTPRLTLRELEVLKAMQQGASNLDISRILYISKNT 176 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDNL 214 V+TH+YN+FKKI+VKNR QAV WA+ +L Sbjct: 177 VRTHVYNIFKKISVKNRIQAVIWADTHL 204 >UniRef50_Q7MHB7 DNA-binding HTH domain-containing protein n=19 Tax=Vibrionales RepID=Q7MHB7_VIBVY Length = 215 Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 11/199 (5%) Query: 27 LQHLKQSLAITGKLHNIQRSLDDISSGSIILLDMMEADKKLI--HYWQDTLSRKNNNIKI 84 LQ+ + +T IQ + I+ +++ D ++ L+ H L R+ N+ + Sbjct: 15 LQNEQTPEFVTVLAKQIQMEIPVITPATLMQADPNHRNRILLIDHQQHKVLLREIKNLPL 74 Query: 85 L-------LLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLAS 137 + L N P ++ + +FY + GL V+ G+ + + +++ Sbjct: 75 IWKGFETVLCNVPSRLTTEELIGFGQCKAIFYRDTAITDMAKGLNSVINGKSWLPRDVSA 134 Query: 138 YLITHSGNY--RYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLF 195 LI + N + S + LT RE ++L ++ G SN++IA LFISE TVK+HLY F Sbjct: 135 QLIHYYRNMVCSHTSPVNVDLTMREIQVLRCVQSGKSNSQIAEDLFISEFTVKSHLYQTF 194 Query: 196 KKIAVKNRTQAVSWANDNL 214 +K++VKNR QA +WA+ NL Sbjct: 195 RKLSVKNRVQAAAWADQNL 213 >UniRef50_D0XHY9 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XHY9_VIBHA Length = 222 Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/145 (34%), Positives = 83/145 (57%), Gaps = 1/145 (0%) Query: 73 DTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFT 132 D +S K N +++ + P+ + + ++ GV Y E + + VL GE + Sbjct: 73 DYISLKTKNTDLVVYDVPKTRSDLRLFSCLNLKGVLYEDAPIEHLTRCIDAVLSGELWLP 132 Query: 133 QKLASYLITHSGNYRYNSTE-SALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHL 191 +KL + ++ H Y +S E S LT REK+IL+++ G SN EIA +LF++E+TVKTH+ Sbjct: 133 RKLMAKMLIHFRPYAISSQEISNTLTKREKQILDRIVQGQSNLEIADALFVAESTVKTHV 192 Query: 192 YNLFKKIAVKNRTQAVSWANDNLRR 216 Y L+KK+ V R +A+ + LR+ Sbjct: 193 YKLYKKLNVSCRKEAIQKFSRPLRQ 217 >UniRef50_A6W0K9 Response regulator receiver protein n=2 Tax=Gammaproteobacteria RepID=A6W0K9_MARMS Length = 196 Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 41/141 (29%), Positives = 76/141 (53%), Gaps = 1/141 (0%) Query: 77 RKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLA 136 +KN +++ + P++ + D+++WP++ G+F+ D+ G + + +GE +F + + Sbjct: 53 QKNGQQGLVIFDVPKNADFSDLKSWPNLKGIFFEYADKTLFEQGFKAIEQGELWFPRPIT 112 Query: 137 SYLITHSGNYRYNST-ESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLF 195 ++T + LT +E ++L L G IA SLFISE TV+ HL+ ++ Sbjct: 113 DCWTRQMLEEEQHTTLRTNNLTRKEIKVLKLLYSGLEYTAIADSLFISEATVRVHLHKIY 172 Query: 196 KKIAVKNRTQAVSWANDNLRR 216 +KI VKN+ QA W N + Sbjct: 173 QKIEVKNKQQARLWCKSNFNK 193 >UniRef50_D0ZA46 Putative uncharacterized protein n=1 Tax=Edwardsiella tarda EIB202 RepID=D0ZA46_EDWTE Length = 210 Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 70/218 (32%), Positives = 107/218 (49%), Gaps = 40/218 (18%) Query: 13 LLLITKSSLQATALLQHLKQSLAITGKLHNIQRS----LDDISSGSIILLDMM--EADKK 66 L LIT+ +LQ+ L+ L L++ L + R+ LDD + +I+ D M + D Sbjct: 15 LSLITQPTLQSMLLVDVLNNYLSVPIYLCDAPRNSTYLLDDCA---LIIFDAMLLDGDPA 71 Query: 67 LIHYWQDTLSRKNNNIKILLLNT---PEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 W + + + +I+L+N E + N I F + Q+ ++ L+ Sbjct: 72 QRSSWLEAIFNQRVGRRIILINVNTHDEGLAWHQHGN---IIAAFPAKTHQQALIRRLRT 128 Query: 124 VL-------RGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEI 176 +L GE +L LT RE E+L ++ GASN +I Sbjct: 129 LLVAAQEDEPGEAIPVPRLTR------------------LTLRELEVLKAMQQGASNLDI 170 Query: 177 ARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 +R L+ISENTV+TH+YN+FKKIAVKNR QAV WA+ +L Sbjct: 171 SRILYISENTVRTHIYNIFKKIAVKNRIQAVKWADMHL 208 >UniRef50_Q0VRG1 DNA-binding response regulator, LuxR family n=1 Tax=Alcanivorax borkumensis SK2 RepID=Q0VRG1_ALCBS Length = 224 Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 40/132 (30%), Positives = 70/132 (53%) Query: 82 IKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLIT 141 +++L+N D + NWP + GV Y + + L V +G +F + YL+ Sbjct: 86 CRVILVNADRDDNIFFLLNWPVVKGVIYQQDSDALISKALDEVCKGRSWFPRSYMDYLVR 145 Query: 142 HSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVK 201 H LT RE+++L+ + G SN+EIA ++ +S +TVK HL +L++K+ VK Sbjct: 146 HRKTPTRCGHIFESLTSRERQMLDHVVRGMSNHEIADAICLSTHTVKAHLQSLYRKVGVK 205 Query: 202 NRTQAVSWANDN 213 +R + W ++N Sbjct: 206 SRVGVMRWVHEN 217 >UniRef50_C7LUR5 Transcriptional regulator, LuxR family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LUR5_DESBD Length = 335 Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 49/131 (37%), Positives = 74/131 (56%), Gaps = 4/131 (3%) Query: 84 ILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHS 143 + L N PED I G+F+ + +V G+ +L E +F+++ S + Sbjct: 195 VALFNVPEDRSLELEAINSGIRGIFFRNSPFKLMVKGVSAMLDNELWFSREAMSAFLLGK 254 Query: 144 GN--YRYNSTES--ALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIA 199 N ++ E+ A L+ RE+EIL L GA+N +IA+ LF+S NTVK+H+YN++KKI Sbjct: 255 QNRPAELSAPENGQADLSQREQEILLMLAAGATNKDIAQKLFLSLNTVKSHIYNIYKKID 314 Query: 200 VKNRTQAVSWA 210 V NR QA WA Sbjct: 315 VPNRLQASLWA 325 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/200 (31%), Positives = 106/200 (53%), Gaps = 20/200 (10%) Query: 26 LLQHLK------QSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKLIHYWQDTLSR 77 +LQ LK + + I G N ++++ +I+ + ++D+ I ++ + + Sbjct: 13 VLQGLKAYLNTREGIEIVGTSGNGEKAIKEIAKLNPEVAVVDLRLPGLNGIEVTRE-IKK 71 Query: 78 KNNNIKILLLNT--PEDYPYRDIENWPHINGVFYSMED--QERVVNGLQGVLRGECYFTQ 133 KN ++++L++ ED I+ + Y M+D E++V ++ RGE T Sbjct: 72 KNPGTEVIILSSFNKEDEVIEAIDAG----ALSYVMKDSRPEKLVEAIKAARRGEPVLTP 127 Query: 134 KLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYN 193 +A ++ + + TE LT REKE+L L G SN +IA++L ISE TVKTH+ N Sbjct: 128 GVAKKIMKRAAR-KGRKTEP--LTPREKEVLACLVRGNSNRDIAKTLCISETTVKTHVSN 184 Query: 194 LFKKIAVKNRTQAVSWANDN 213 + KK+ VK+RTQAV A +N Sbjct: 185 ILKKLDVKDRTQAVIKAIEN 204 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/141 (36%), Positives = 77/141 (54%), Gaps = 8/141 (5%) Query: 79 NNNIKILLLNTPE--DYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLA 136 N N KIL+L E + + +++ +G ER++ ++ V GE LA Sbjct: 81 NPNTKILMLTVSETEEMLFEAVKSG--ASGYVLKSVSPERLIECVRQVYEGEPVVPSSLA 138 Query: 137 SYLI---THSGNYRYNSTESAL-LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLY 192 +I + + R S+ES LT RE+E+L L GASN EIAR+LFISENTV+ H+ Sbjct: 139 MKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIARALFISENTVRNHVR 198 Query: 193 NLFKKIAVKNRTQAVSWANDN 213 ++ K+ + NR QA ++A N Sbjct: 199 HILDKLHLSNRAQAAAYAVRN 219 >UniRef50_A0LDZ6 Transcriptional regulator, LuxR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDZ6_MAGSM Length = 220 Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 70/214 (32%), Positives = 111/214 (51%), Gaps = 17/214 (7%) Query: 13 LLLITKSSLQATALLQHLKQSL--AITGKLHNIQRSLDDISS-GSIILL-DMMEA-DKKL 67 L++ T+ ++QA L+ +L++ + A T + + SS GS++ + D ++ DK+ Sbjct: 8 LIVFTQPTIQARLLIAYLEREMGRACTQQAGTAPTAFTVRSSLGSVLWIWDWQQSGDKER 67 Query: 68 IHYWQDTLSRKNNNIK-ILLLNTPEDYPY--RDIENWPHINGVFYSMEDQERVVNGLQGV 124 I LS ++ + +LL+N P+D R +++ I GV E+++ ++ V Sbjct: 68 IF---SLLSNQSGAVPLVLLINLPDDISLELRALQS--GIRGVVTFDTPLEQLIRAVEAV 122 Query: 125 LRGECYFTQK-LASYLI---THSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL 180 RGE +F++K L LI SG S +T RE EIL + G SN IA L Sbjct: 123 ERGELWFSRKTLTRGLIERGPQSGTLPKRSHWPNGITSREAEILRLITSGCSNKRIAYEL 182 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 IS +TVK H YNL++KI NR A +WA NL Sbjct: 183 GISLHTVKAHTYNLYRKIDASNRMDAANWAEMNL 216 >UniRef50_D0YX60 Transcriptional regulator VpsT n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YX60_LISDA Length = 219 Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 43/138 (31%), Positives = 74/138 (53%), Gaps = 5/138 (3%) Query: 75 LSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQK 134 L K++ IL+ N D + +WP + G+ E ++ + V+ + ++ Sbjct: 70 LESKDSETPILIFNIDTDITTDTLLSWPKVKGILSKDSPIEHLIKSIAVVIEHGLWLPRQ 129 Query: 135 LASYLITHSGNYRYNS-----TESALLTHREKEILNKLRIGASNNEIARSLFISENTVKT 189 ++ + N++ ++ LLT REK+IL L G +N EIA +LF++E TVK+ Sbjct: 130 TLEQMLDYYRNHKPSNDTRLLPTQPLLTRREKQILGLLTEGKTNIEIAETLFVAETTVKS 189 Query: 190 HLYNLFKKIAVKNRTQAV 207 H+YNL+KKI VK R +A+ Sbjct: 190 HIYNLYKKIDVKCRKEAI 207 >UniRef50_A4VGJ9 DNA-binding response regulator CorR n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VGJ9_PSEU5 Length = 218 Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 3/153 (1%) Query: 55 IILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQ 114 + L+D ++ + I D L +++ + L+N + + +E P I GVFYS + Sbjct: 54 LFLVDAGHSEAEQISSLIDQL---DDHTPVALVNIVPEQAEQLVEKHPVIRGVFYSHATR 110 Query: 115 ERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNN 174 E ++ G++ +L+G + + L L+ R + LT RE+EIL+ G SN Sbjct: 111 EHLLEGIRVLLKGGDWLPRVLTERLLGQWRRMRQLAESKTSLTLREREILSLAGKGLSNA 170 Query: 175 EIARSLFISENTVKTHLYNLFKKIAVKNRTQAV 207 EIA L +S +T+K+H++NL +KI NR +A Sbjct: 171 EIAEQLCLSPHTIKSHIHNLLRKIGASNRAEAA 203 >UniRef50_P55184 Uncharacterized transcriptional regulatory protein yxjL n=1 Tax=Bacillus subtilis RepID=YXJL_BACSU Length = 218 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 12/166 (7%) Query: 55 IILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNT--PEDYPYRDIENWPHINGVFYSME 112 +IL+D+ I +D +S N KI++L T E+Y + I V Y ++ Sbjct: 54 VILMDVQMPRCSGIEAAKDIMSALPNT-KIVILTTFDTEEYVFEGI----RAGAVGYLLK 108 Query: 113 D--QERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESAL---LTHREKEILNKL 167 D E +++ ++ RGE F A+ +I+ + + + L T RE E+L ++ Sbjct: 109 DTLPEELIDAIRAAARGEAIFRTVTAAKIISETFRAKQQTHAEELAEPFTKRELEVLQQM 168 Query: 168 RIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 G N +IA LF+SE+TVKTH++ + +K ++RTQAV +A N Sbjct: 169 AYGLRNEDIAEKLFVSESTVKTHVHRILQKCNAQDRTQAVVFAIRN 214 >UniRef50_B7VRP3 Transcriptional regulator, LuxR family n=3 Tax=Vibrio RepID=B7VRP3_VIBSL Length = 227 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/144 (34%), Positives = 82/144 (56%), Gaps = 7/144 (4%) Query: 74 TLSRKNNNIKILLLNTPEDYPYRDIE-----NWPHINGVFYSMEDQERVVNGLQGVLRGE 128 TLS+ +N K ++ + P D + I N +I G+ Y E + L+ V + Sbjct: 72 TLSKVESN-KWVIYDVPSDITGQSITVMQLFNMFNIKGIIYQDAPVEHLTRCLKTVCDDD 130 Query: 129 CYFTQKLASYLITHSGNYRYNSTES-ALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 + +KL S++++++ + + S + LT RE +I ++ G +N EI+ LFISE+TV Sbjct: 131 LWLPRKLMSHILSNARSQTFKSQVILSTLTKREAQIFKRVIRGDTNLEISSELFISESTV 190 Query: 188 KTHLYNLFKKIAVKNRTQAVSWAN 211 KTH+YN++KKI V NR +A+ AN Sbjct: 191 KTHVYNIYKKINVTNRKEAIRKAN 214 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 44/100 (44%), Positives = 63/100 (63%), Gaps = 2/100 (2%) Query: 115 ERVVNGLQGVLRGECYFTQKLASYLIT-HSGNYRYNSTESALLTHREKEILNKLRIGASN 173 E+VV ++ + RG+ ++ LIT H + S E+ L T REKEIL +L G SN Sbjct: 112 EQVVAAIRMLYRGDSVIHPRMTKKLITYHQQKMKVESNENEL-TEREKEILFELVKGLSN 170 Query: 174 NEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 EIA +L+IS+ TVK H+ +FKK+ VK+R+QAV +A N Sbjct: 171 KEIAEALYISDKTVKIHINKIFKKLNVKSRSQAVIYAVRN 210 >UniRef50_Q3ID65 Putative csg operon transcription regulator (LuxR family) n=2 Tax=Alteromonadales RepID=Q3ID65_PSEHT Length = 229 Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 17/122 (13%) Query: 103 HINGVFYSMEDQERVVNGLQGVLRGECYFT-----QKLASYLITHSGNYRYNSTESAL-- 155 H+NGVFY E V GL + GE +FT Q + L+ S ++S + Sbjct: 98 HVNGVFYKSTPSEEVFKGLVKINAGELWFTRMILSQAFSDILVATSS---FSSLHEGIEL 154 Query: 156 -------LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVS 208 LT RE+ +++ + GASN+ IA L IS++TVKTHLY+ FKK + +NR + + Sbjct: 155 KQDDYQHLTKRERSVIHLIAQGASNSVIADKLNISDHTVKTHLYSAFKKTSSRNRVELAN 214 Query: 209 WA 210 WA Sbjct: 215 WA 216 >UniRef50_B4RW68 Putative transcriptional regulator, LuxR family protein n=2 Tax=Alteromonas macleodii RepID=B4RW68_ALTMD Length = 159 Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 75/133 (56%), Gaps = 10/133 (7%) Query: 85 LLLNTPE---DYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASY--- 138 ++ N P+ D+ Y +++ ING+F+ ++ E +V G+Q V G ++++++ S Sbjct: 16 VIFNVPQADVDFHYAALQH--GINGIFHIEDNLELLVRGVQQVQAGNKWYSREIMSRYID 73 Query: 139 --LITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFK 196 L+ + + + +LT RE I K+ GA N EIA L IS NTVKTH+Y++F+ Sbjct: 74 ANLVPKTKPVAALQSSTTVLTKRELAITRKIADGAQNQEIADCLHISVNTVKTHVYSIFR 133 Query: 197 KIAVKNRTQAVSW 209 K +NR + + W Sbjct: 134 KTDCRNRVELIKW 146 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 1/105 (0%) Query: 106 GVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILN 165 G Y D + + ++ V G ++A L+T + +S+ LT RE+E+L+ Sbjct: 106 GYVYKDIDPDALAGAIRSVHAGHVLLQPEVAVALLTQD-DQGPSSSRGGALTDREREVLS 164 Query: 166 KLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 + G SN EIAR+L +SE TVKTH+ N+ K+ V +RTQA WA Sbjct: 165 HIADGRSNREIARALVLSEKTVKTHVSNILMKLDVADRTQAALWA 209 >UniRef50_A4VNF1 DNA-binding response regulator, LuxR family n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VNF1_PSEU5 Length = 215 Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 12/160 (7%) Query: 53 GSIILLDMMEADKKL-IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSM 111 +++LLD+ D+ +H L R+ + + L+N D R +E P I GVFY Sbjct: 53 AALVLLDVGSYDRDTNVH-----LLRQIGDTPVALVNAQPDQARRLVETHPWIRGVFYRA 107 Query: 112 EDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESAL---LTHREKEILNKLR 168 + V G++ +L G + ++L L++ YR S+ + + LT REK+IL Sbjct: 108 TPRTIFVRGIRTLLTGGDWLPRELMEALLS---RYRQLSSANQVIDELTLREKQILALAG 164 Query: 169 IGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVS 208 G SN EI L +S +T+K+H++N +K+ NR Q S Sbjct: 165 QGLSNAEIGEKLHLSIHTIKSHVHNALRKLGASNRAQGAS 204 >UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3 Tax=Bacillus RepID=YHCZ_BACSU Length = 214 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/137 (35%), Positives = 67/137 (48%), Gaps = 22/137 (16%) Query: 96 RDIENWPHING-VFYSMEDQERVVNGLQG--------------------VLRGECYFTQK 134 + I+ +P N V S DQE V+ LQ V GE + Sbjct: 67 KAIQQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKTRQVHGGEYKLSTA 126 Query: 135 LASYLITHSGNYRYNSTESAL-LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYN 193 + +++TH N E LT REK++L ++ G SN EIA +LFISE TVKTH+ N Sbjct: 127 IMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALFISEKTVKTHVSN 186 Query: 194 LFKKIAVKNRTQAVSWA 210 L K+ V +RTQA +A Sbjct: 187 LLAKLEVADRTQAALFA 203 >UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD7_9MICO Length = 207 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/197 (24%), Positives = 95/197 (48%), Gaps = 31/197 (15%) Query: 32 QSLAITGKLHNIQRSLD--DISSGSIILLDM-------MEADKKLIHYWQDTLSRKNNNI 82 L++ G+ + Q ++ D ++ ++L+D+ +EA + ++ DT Sbjct: 25 PGLSVVGEARDGQEAVAGIDAAASDVVLMDLSMPVMDGVEATRAILSTHPDT-------- 76 Query: 83 KILLLNTPEDYPYRDIENWPHI---NGVFYSMEDQER--VVNGLQGVLRGECYFTQKLAS 137 ++L+L + + D E + + Y ++D E ++ + RGE ++A Sbjct: 77 RVLVLTS-----FSDRERVKEVLAAGAIGYVLKDAEPADLLAAVHAAARGEVPIDPRVAG 131 Query: 138 YLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKK 197 L+ +G L+ RE ++L + G +N ++AR+L I+E TVK HL +F++ Sbjct: 132 ALLPSAGGPSVADR----LSPRETQVLRLVAQGLANKQVARALGITERTVKAHLGRVFRE 187 Query: 198 IAVKNRTQAVSWANDNL 214 I V +RT A WA D+L Sbjct: 188 IGVLDRTSAALWARDHL 204 >UniRef50_D1BCA8 Two component transcriptional regulator, LuxR family n=18 Tax=Bacteria RepID=D1BCA8_SANKS Length = 234 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/106 (38%), Positives = 59/106 (55%), Gaps = 8/106 (7%) Query: 109 YSMEDQER--VVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNK 166 Y ++D R +V G++ RG+ T +A+ L++ G+ R + LT RE E+L Sbjct: 128 YLLKDTPRAELVAGIREAARGQTVLTPSVATRLVSQVGS-RADR-----LTPREVEVLRA 181 Query: 167 LRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 + G SN + LFISE TVKTHL F K+ V +RT AV+ A D Sbjct: 182 VARGLSNAAVGHELFISETTVKTHLIRAFGKLGVNDRTHAVTVATD 227 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/191 (28%), Positives = 95/191 (49%), Gaps = 23/191 (12%) Query: 31 KQSLAITGKLHNIQRSLDDISS--GSIILLDM-------MEADKKLIHYWQDTLSRKNNN 81 ++ I G+ N + +L + + ++L+D+ +EA K++ Y + Sbjct: 37 REEFEIVGEAENGEDALTFVRTERPDVVLMDLSMPKMDGIEATKQIKQY--------DET 88 Query: 82 IKILLLNT--PEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYL 139 IKIL+L++ +DY +E +G E++V + + G F K+ L Sbjct: 89 IKILILSSFSEQDYVLPALEAGA--DGYQLKEVQPEQLVASIIAIYEGNANFHPKVTPAL 146 Query: 140 ITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIA 199 + S + N ++LT RE+E+L ++ G SN EIA L I+E TVKTH+ N+ K+ Sbjct: 147 LGRSAVKKENPF--SMLTKREQEVLQEIAKGRSNKEIAAELHITEQTVKTHVSNILAKLE 204 Query: 200 VKNRTQAVSWA 210 V +RTQA +A Sbjct: 205 VDDRTQAALYA 215 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 56/165 (33%), Positives = 79/165 (47%), Gaps = 10/165 (6%) Query: 52 SGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSM 111 S ++LLD+ + I + L ++ IKI++L ED Y NG Sbjct: 56 SPDVVLLDISMPKQNGIQTLR-RLKDMDSTIKIIMLTFHEDREYLFETINLGANGYVLKD 114 Query: 112 EDQERVVNGLQGVLRGECYFTQKLASYLITH------SGNYRYNSTESALLTHREKEILN 165 + E ++ ++ V +G Y LA+ L+ R N E LT RE E+L Sbjct: 115 AESESLIKAIRDVYQGLNYIYPTLATELVKEFNRREVKSQKRNNEDE---LTRREYEVLT 171 Query: 166 KLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 L G +N EI LFISE TVK H+ N+FKKI V +RTQA +A Sbjct: 172 LLAEGINNKEIGDCLFISEKTVKNHVSNIFKKINVNDRTQAAIYA 216 >UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteroidetes RepID=A5FAZ3_FLAJ1 Length = 219 Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 10/138 (7%) Query: 73 DTLSRKNNNIKILLLNT--PEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECY 130 + L +NNN+KI++L+ E+Y + I+ +G +E + L V G Y Sbjct: 70 EKLRSENNNVKIIMLSMHESEEYVLKSIKAGA--DGYLLKGSSKEEFLKALHAVSSGGKY 127 Query: 131 FTQKLASYLI------THSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISE 184 F+ ++S LI T S + E ++T REKEIL L G N EIA +L IS+ Sbjct: 128 FSGDISSILISQLTNSTASLEPKQTLGEEMMITKREKEILTLLLSGKGNKEIAEALEISK 187 Query: 185 NTVKTHLYNLFKKIAVKN 202 T + H +NL KK+ VKN Sbjct: 188 RTAEVHRFNLMKKLKVKN 205 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 10/160 (6%) Query: 55 IILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQ 114 ++++D++ I + TL + ++ +L+L ED G D Sbjct: 67 VVVMDLVMPGVTGIEATR-TLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADG 125 Query: 115 ERVVNGLQGVLRGECYFTQKLAS----YLITHSGNYRYNSTESALLTHREKEILNKLRIG 170 + ++ V RGE + +A +L T + + LT RE+EIL+ L G Sbjct: 126 NDFIAAVRAVARGEAVYGPAVARRIRRFLTTGPESGPFPE-----LTQREREILDLLASG 180 Query: 171 ASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 SN EIAR LF+S+ TVK HL ++F K+ V +RTQAV A Sbjct: 181 KSNAEIARRLFLSQKTVKNHLTSIFAKLQVADRTQAVVRA 220 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 59/189 (31%), Positives = 103/189 (54%), Gaps = 20/189 (10%) Query: 34 LAITGKLHNIQRSLDDI--SSGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNT-- 89 +++ G++ N Q+++D + I+L+D+ I + + + N NI I+ L Sbjct: 30 ISVVGEVTNGQQAVDYCLKNPVDIVLMDINMPIMNGIEACRQ-IKKLNPNIGIIALTIHD 88 Query: 90 PEDYPYRDIENWPHINGVFYSMED--QERVVNGLQGVLRGECYFTQKLASYLITH----- 142 ++Y + I+ I+G Y ++D ++++ + GV +GE + L + ++ Sbjct: 89 QDEYLFELIKYG--ISG--YVLKDIHPDQLIKTILGVAQGESFIPPSLTARVLAEFTRLS 144 Query: 143 SGNYRYNSTESAL-LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVK 201 SG+Y S + L LT RE E+L ++ G SN IA +L+ISE TVK HL N+F+KI V Sbjct: 145 SGDY---SEKKHLNLTEREIEVLKQVAKGQSNKAIANALYISEKTVKNHLTNIFQKIGVA 201 Query: 202 NRTQAVSWA 210 +RTQA +A Sbjct: 202 DRTQAALYA 210 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 6/105 (5%) Query: 106 GVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILN 165 G Y D + + ++ V G+ F ++ + + + A LT RE+E+L Sbjct: 103 GFLYKDIDPDSLAQAIRSVADGQVIFAREAVTAMTAPAPG------PVAALTAREREVLA 156 Query: 166 KLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 + G SN EIA+ L ++E TVKTHL +LF+K+ V +RTQA +A Sbjct: 157 LVAAGRSNREIAKQLSVAEKTVKTHLSSLFRKLGVADRTQAALYA 201 >UniRef50_C0Z4M7 Two-component response regulator n=7 Tax=Bacillales RepID=C0Z4M7_BREBN Length = 235 Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 53/201 (26%), Positives = 107/201 (53%), Gaps = 23/201 (11%) Query: 30 LKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLL 87 +++ + ++G+ N + ++ + ++L+D+ + I ++ ++R + ++K+L+L Sbjct: 31 MQKDMEVSGEASNGEEAVKIVGEIIPDVVLMDVQMPNMSGIDATRE-ITRLHPSVKVLIL 89 Query: 88 NTPEDYPYRDIENWPHINGVFYSMEDQER--VVNGLQGVLRGECYF-----TQKLASYLI 140 T + Y Y I + V Y ++D + +++ ++ +GE F + LA L Sbjct: 90 TTFDTYDY--IVDGIRAGAVGYMLKDSDSQDMLDLIRRAHQGEALFYTATAAKALAEVLQ 147 Query: 141 THSGNYRYNS---TESAL--------LTHREKEILNKLRIGASNNEIARSLFISENTVKT 189 NY +S +S L LT RE+++L +L G N++IA+ L IS TVKT Sbjct: 148 FQQKNYEPDSDADCDSTLPPLVMFDQLTDRERDVLEQLSYGKRNDQIAQHLLISGGTVKT 207 Query: 190 HLYNLFKKIAVKNRTQAVSWA 210 H++ + +K+ V++RTQAV+ A Sbjct: 208 HIHRILQKMGVEDRTQAVAKA 228 >UniRef50_B2J2N1 Two component transcriptional regulator, LuxR family n=12 Tax=Cyanobacteria RepID=B2J2N1_NOSP7 Length = 232 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 61/213 (28%), Positives = 106/213 (49%), Gaps = 14/213 (6%) Query: 13 LLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDISS--GSIILLD--MMEADKK 66 LL++ SL L L+Q L + G N + +L+ ++ ++L+D M E D + Sbjct: 11 LLIVDDQSLIRQGLKAMLEQEPDLEVVGDAENGKVALELVAELQPDVVLMDIRMPEMDGR 70 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFY----SMEDQERVVNGLQ 122 + + NIK+L+L+T +D Y G S E + + G Sbjct: 71 TATKL---IMQSFPNIKVLVLSTFDDDSYLTGAMRAGAKGYLLKDMPSSELADAIRFGHS 127 Query: 123 GVLR-GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLF 181 G + G F + L + + S N S++ + +T RE+E+L + +GA+N EIA+ L+ Sbjct: 128 GYTQFGPGLFDKLLVTEAASASANQNSASSKPSEITAREQEVLCLIGVGATNREIAQQLY 187 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 I+E TVKTH+ ++ ++ +KNR+Q +AN L Sbjct: 188 ITEGTVKTHVTSILSRLNLKNRSQLAIYANSVL 220 >UniRef50_A3Y699 Putative two component system response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y699_9GAMM Length = 226 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 8/165 (4%) Query: 55 IILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNT--PEDYPYRDIENWPHINGVFYSME 112 +IL+D+ + + L N +I++L+T ++Y YR + +G Sbjct: 51 LILMDIRMPEMDGLSATSAILGDLNIQTRIVILSTFDLDEYIYRALREGA--SGFILKDT 108 Query: 113 DQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESA----LLTHREKEILNKLR 168 + +V + V +G T + LI + + T LT REKEIL L Sbjct: 109 PPDELVAAVHVVAQGGALLTPSITKKLIGAFAELKPSHTNVTGHIDRLTTREKEILKNLA 168 Query: 169 IGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 +G +N+EIA LFI E+TVKTH+ +L K+ +++R QAV +A +N Sbjct: 169 LGFNNSEIASRLFIGESTVKTHVSSLLSKLELRDRAQAVIFAYEN 213 >UniRef50_A4WZW6 Putative uncharacterized protein n=1 Tax=Rhodobacter sphaeroides ATCC 17025 RepID=A4WZW6_RHOS5 Length = 243 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 16/146 (10%) Query: 73 DTLSRKNNNIKILLLNTPEDYPYRDIENWPH--INGVFYSMEDQERVVNGLQGVLRGECY 130 D ++ ++ ++L+ PE D+ + H + G+ + + + L VL G CY Sbjct: 80 DGIASAAGDVPVILM--PERMDEEDVRDALHLGVRGLLPTSIEPRVAIAALDLVLAGGCY 137 Query: 131 FTQKLAS---YLITHSGNYRYNSTESAL--------LTHREKEILNKLRIGASNNEIARS 179 F ++ + + + G E+ L LT R+ E+L L GASN EIAR Sbjct: 138 FPVEVPAGQPFPLPSPGPA-TGLREAPLAAEGLDMPLTDRQNEVLRSLGAGASNKEIARQ 196 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQ 205 L ISE TVK H+ +L +K V NRTQ Sbjct: 197 LSISEATVKIHVRHLMRKYGVSNRTQ 222 >UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4 Tax=Streptomyces RepID=D1XHI5_9ACTO Length = 222 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 7/103 (6%) Query: 115 ERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESAL-------LTHREKEILNKL 167 E +V + V+ GE + K+ L+ AL LT RE E+L + Sbjct: 106 EEIVQAIDAVMSGEAGLSPKVQRRLLERVTGSETVPAPCALPSELPDGLTPREAEVLVLI 165 Query: 168 RIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 G SN EIAR+L +S TVKTH+ NLF K ++RTQAV +A Sbjct: 166 AEGLSNREIARALHVSAATVKTHINNLFAKTGARDRTQAVRYA 208 >UniRef50_D2SFS4 Two component transcriptional regulator, LuxR family n=2 Tax=Frankineae RepID=D2SFS4_9ACTO Length = 220 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/163 (28%), Positives = 88/163 (53%), Gaps = 16/163 (9%) Query: 54 SIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMED 113 S+ +LD + A ++++ ++ ++++L+L + D R IE G Y ++D Sbjct: 56 SMPVLDGVAATRRIVE--------EHPSVEVLVLTSFSDR-QRVIEALDAGAG-GYVLKD 105 Query: 114 QER--VVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGA 171 E ++ ++ RG ++A ++ + R + +A LT RE+E+L + G Sbjct: 106 TEPADLLAAIRSTARGHSPLDPRVARTVL----HARRSPVRAAELTEREQEVLALVGHGL 161 Query: 172 SNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 +N +IAR L I E+TVK HL ++F++I V++RT A WA +L Sbjct: 162 ANKQIARRLGIRESTVKAHLTSVFQRIGVRDRTSATLWARTHL 204 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/98 (39%), Positives = 57/98 (58%), Gaps = 3/98 (3%) Query: 116 RVVNGLQGVLRGECYFTQKLASYLI---THSGNYRYNSTESALLTHREKEILNKLRIGAS 172 RV++ L+ +L GE Q+LA+ LI N + LT RE+E+L + G + Sbjct: 119 RVISALRRLLSGESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRT 178 Query: 173 NNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 N EIAR L IS T K+H+ N+ +K+ V +RTQAV+ A Sbjct: 179 NPEIARELVISRGTAKSHVQNIIRKLGVSDRTQAVARA 216 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 19/134 (14%) Query: 96 RDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYF-----TQKLASYLITHSGN----- 145 R +++ P + V ++ D ER++ L+ RG C T+ + H+G Sbjct: 72 RGLDDPPKV--VVFTAYDDERLLEALREGARG-CLLKGASRTEIFDAVRTVHAGGSVIPP 128 Query: 146 ------YRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIA 199 + ES LT RE E+L + G +N E+AR+LFISE TVK H+ +L K+ Sbjct: 129 EITARVLKEMRGESEPLTPRELEVLRLVARGLTNREVARALFISERTVKFHVSSLLAKLR 188 Query: 200 VKNRTQAVSWANDN 213 +NRTQAV+ A + Sbjct: 189 AENRTQAVAIARER 202 >UniRef50_Q3IJW5 Putative transcriptional regulator, LuxR family n=3 Tax=Alteromonadales RepID=Q3IJW5_PSEHT Length = 218 Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 8/115 (6%) Query: 104 INGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNS--------TESAL 155 I GVFY+ ++ + ++ G++ +L + ++ + + + + ++ E Sbjct: 95 IRGVFYTTDNADVLMKGIRLLLEDQLWYRRDIMCNALNRMLQFNKDALHKLTEGDIEPVK 154 Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 LT REK I++ + G+ N EIA L IS +TVKTHLY+ F+K +NR + +SWA Sbjct: 155 LTKREKAIISLMSNGSKNKEIAEELSISPHTVKTHLYSAFRKTKCRNRIELLSWA 209 >UniRef50_D1CI66 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1CI66_THET1 Length = 218 Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 49/140 (35%), Positives = 72/140 (51%), Gaps = 6/140 (4%) Query: 75 LSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMED--QERVVNGLQGVLRGECYFT 132 +S + +K+++L ED D+ + Y +D ++ L+ RGE FT Sbjct: 67 ISAEMPEVKVVVLTASEDD--EDLFEAVKSGALGYMFKDVRSDQFFELLEAASRGEPAFT 124 Query: 133 QKLASYLITH-SGNYRYNSTESALLTHREKEILNKLRIGA-SNNEIARSLFISENTVKTH 190 LA L+ S E +LT RE+EIL L G SN E+A L +SENTVK H Sbjct: 125 PGLARKLLREMSKPAGRAEREPEVLTEREQEILELLVQGVTSNKELAERLILSENTVKYH 184 Query: 191 LYNLFKKIAVKNRTQAVSWA 210 L N+ K+ ++NRTQ V++A Sbjct: 185 LRNILDKLHLQNRTQVVAYA 204 >UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=Q1AVR6_RUBXD Length = 220 Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 49/192 (25%), Positives = 91/192 (47%), Gaps = 11/192 (5%) Query: 27 LQHLKQSLAITGKLHNIQRSLDDISSG--SIILLDMMEADKKLIHYWQDTLSRKNNNIKI 84 L L++ + + G+ + +L+ + ++L+D+ I + L R++ + Sbjct: 23 LLDLEEGVEVVGEAADGVEALERLPGARPEVVLVDVRMPRMDGIQLIE-RLGREHPEVAA 81 Query: 85 LLLNTPED--YPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITH 142 ++L T +D Y +R + G E + ++ V RGE + +I+ Sbjct: 82 IILTTFDDDEYVFRGLRAG--ARGYILKDTPSEELAAAIEKVHRGEAVLDGPITLKVISE 139 Query: 143 SGNYRYNSTE----SALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKI 198 G S L+ RE E+L + GASN EIAR+L+I+E TVK H+ ++ +K+ Sbjct: 140 LGRLSKGPAGPQPGSGGLSEREMEVLRLVASGASNREIARALYITEGTVKNHISSILRKL 199 Query: 199 AVKNRTQAVSWA 210 ++RTQA +A Sbjct: 200 GFRDRTQAALYA 211 >UniRef50_A4TWP9 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TWP9_9PROT Length = 222 Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 63/202 (31%), Positives = 91/202 (45%), Gaps = 38/202 (18%) Query: 38 GKLHNIQRSLDDISSGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTP------- 90 G + +QR D+ S +L+ D+ LI Q + N + IL LN P Sbjct: 18 GLVPFLQRVTDNAS-----VLEAGSFDEALIKARQAS----NLGLTILDLNMPGMDGLNG 68 Query: 91 -----EDYPYRDI---ENWPHINGVFYSMEDQ-----------ERVVNGLQGVLRGECYF 131 ++P+ + H F+S+E E ++ L+ VL GE Y Sbjct: 69 LATMRAEFPHVPVVILSGSTHPADAFHSIESGANGFIPKTMRGETIIGVLRLVLSGEKYV 128 Query: 132 TQKLASYLITHSGNYRYNSTES---ALLTHREKEILNKLRIGASNNEIARSLFISENTVK 188 L Y T + N+ +S A+L+ RE EIL + GA N IAR+ + E TVK Sbjct: 129 PPFLFDYHETMNRKEPENTGKSGPLAVLSAREMEILGMIVDGAPNKVIARAFELQEVTVK 188 Query: 189 THLYNLFKKIAVKNRTQAVSWA 210 HL N+F+KIAV NRT+A A Sbjct: 189 AHLRNIFRKIAVSNRTEAARVA 210 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 1/107 (0%) Query: 105 NGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYN-STESALLTHREKEI 163 G Y D + ++ V G ++A+ L+ N + ++ LT RE+E+ Sbjct: 105 RGYVYKDVDPAALAAAVRSVHAGHVLLEPEVATALLDSGSNGAADQGPQAPALTAREREV 164 Query: 164 LNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 L + G +N EIAR+L ++E TVKTH+ N+ K+ V +RTQA WA Sbjct: 165 LVLIAQGRANREIARALVLAEKTVKTHVSNILMKLGVADRTQAALWA 211 >UniRef50_C1D4V7 Probable two-component response regulator n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D4V7_LARHH Length = 196 Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 3/85 (3%) Query: 124 VLRGECYFTQKLASYLITHSGNYRYNST---ESALLTHREKEILNKLRIGASNNEIARSL 180 V G + + L L GN+ ALLT RE+E++ LR G +N EIAR L Sbjct: 106 VASGASWIGRDLLGLLCMQVGNHLSRDGIDGPGALLTEREREVVQALRRGLANKEIAREL 165 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQ 205 ISENTVK HL ++F+K+ V++R Q Sbjct: 166 DISENTVKKHLSSVFQKLGVEDRLQ 190 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 43/106 (40%), Positives = 58/106 (54%), Gaps = 4/106 (3%) Query: 109 YSMED--QERVVNGLQGVLRGECYFTQKLASYLITHSGNYR--YNSTESALLTHREKEIL 164 Y ++D E +V + V RG +A +I + + S LT RE+EIL Sbjct: 106 YVLKDISAEELVQAVYQVARGARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREIL 165 Query: 165 NKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 + +G SN EIAR LFISE TVK HL ++F KI V +RTQA +A Sbjct: 166 IHVSLGKSNREIARELFISEKTVKNHLTHIFHKIGVSDRTQAALYA 211 >UniRef50_D1BXU0 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D1BXU0_XYLCX Length = 223 Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 9/139 (6%) Query: 82 IKILLLNT--PEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYL 139 I +L+L T +DY + +E ++G + E + ++ V G Q L + Sbjct: 78 IPVLVLTTFDLDDYVFGALEA--GVSGFLLKDAEPETITTAIRQVAAGNGTIDQTLTRRI 135 Query: 140 ITHSGNYRY-----NSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNL 194 + R S + +LT RE+EIL L G SN+EIAR+L + +TVK+HL + Sbjct: 136 LREFVQRRSLQPVSTSRGNGVLTSREQEILLLLAQGMSNDEIARTLVVELSTVKSHLARM 195 Query: 195 FKKIAVKNRTQAVSWANDN 213 K+ V++R QAV WA N Sbjct: 196 LPKLGVRSRLQAVVWAYQN 214 >UniRef50_D2S9C3 Two component transcriptional regulator, LuxR family n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S9C3_9ACTO Length = 215 Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 4/111 (3%) Query: 105 NGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEIL 164 +G +D E +++ ++ + G + + ++ + R + + LLT REKE+L Sbjct: 99 DGYLLKYQDGESILDAVRCIAAGGAPVDPMVTAAVLA---DLR-DRGQGDLLTDREKEVL 154 Query: 165 NKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLR 215 +R G N IAR L ISE TVKTH+ + ++I +RTQA WA LR Sbjct: 155 ELVRQGLPNKVIARRLRISEATVKTHVTRILQRIGATDRTQAALWAERRLR 205 >UniRef50_A1SCE4 Response regulator receiver n=1 Tax=Nocardioides sp. JS614 RepID=A1SCE4_NOCSJ Length = 214 Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 4/179 (2%) Query: 36 ITGKLHNIQRSLDDISSGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPY 95 + G + + +L ++S +++LD+ I N ++ IL+L E+ P Sbjct: 32 VIGSYADAEAALPHVTSADLVVLDLGLPGVDGIEA-TGLFKSANPSLAILVLTMSEETPV 90 Query: 96 RDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESA- 154 +G + E + L+ V RG+ F +++A+ ++ +G ++ SA Sbjct: 91 LTAAVRAGASGYLVKGSEPEDIERALRAVARGQVVFGEQVAAAVLAQAGRRTTVASVSAF 150 Query: 155 -LLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 LL+ RE E+L+ + G SN EIA SL +S T K H+ ++ K+ RT+AV+ A D Sbjct: 151 PLLSAREVEVLDLIAAGRSNAEIAASLVVSPKTAKNHVSSILTKLGC-TRTEAVARARD 208 >UniRef50_A0JWK5 Transcriptional regulator, LuxR family n=3 Tax=Arthrobacter RepID=A0JWK5_ARTS2 Length = 547 Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 39/64 (60%) Query: 149 NSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVS 208 + T+ LT RE E+L + GASN ++A +L ISE TV HL N+F KI V RT A Sbjct: 480 DGTDRGGLTARECEVLALITTGASNRQVADALVISEKTVGRHLANIFGKIGVSTRTAAAG 539 Query: 209 WAND 212 WA D Sbjct: 540 WARD 543 >UniRef50_Q397N7 ATP-dependent transcriptional regulator, MalT-like, LuxR family n=1 Tax=Burkholderia sp. 383 RepID=Q397N7_BURS3 Length = 889 Score = 66.2 bits (160), Expect = 8e-10, Method: Composition-based stats. Identities = 34/60 (56%), Positives = 43/60 (71%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLR 215 L+ RE+EIL L GASN EI+ LF+SENTVK HL N++ K+ VKNR QA+ A +LR Sbjct: 830 LSQREQEILRLLCSGASNREISEKLFLSENTVKFHLKNVYLKLDVKNRAQAILKAQLDLR 889 >UniRef50_C0WF90 Possible response regulator n=5 Tax=Corynebacterium RepID=C0WF90_9CORY Length = 219 Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 12/166 (7%) Query: 55 IILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNT--PEDYPYRDIENWPHINGVFYSME 112 + +LD+ I Q LSR N +I++L T ED + I H G Sbjct: 52 VAILDIRMPGMDGIAAAQAILSR-TPNCRIIMLTTFNEEDLVSQSIAAGAH--GFLLKDA 108 Query: 113 DQERVVNGLQGVLRGECYFTQKLASYLI-------THSGNYRYNSTESALLTHREKEILN 165 D E +V+ ++ V +GE ++ ++ THS + +L+T RE E+L Sbjct: 109 DPEVLVHAVRDVAKGESVLAAQVTGPVLEGYRKALTHSQLSPHERQGLSLVTRREMEVLT 168 Query: 166 KLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAN 211 + GA+N+EIA + I++ TVKTH+ L K+A ++R V A+ Sbjct: 169 LIARGATNSEIAGHMSIADTTVKTHVSALMSKLAARDRVALVLLAH 214 >UniRef50_C7MUJ2 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=101 Tax=Bacteria RepID=C7MUJ2_SACVD Length = 239 Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%) Query: 58 LDMMEADKKLIHYWQDTLSRKNNNIKILLLNT--PEDYPYRDIENWPHINGVFYSMEDQE 115 LD +EA ++L+ + ++ K+++L T EDY + + +G E Sbjct: 79 LDGLEATRRLLGP-----AGADHPTKVIILTTFDREDYLFEALRAG--ASGFLLKNASPE 131 Query: 116 RVVNGLQGVLRGECYFTQKLASYLITH------SGNYRYNSTESALLTHREKEILNKLRI 169 ++ ++ V RG+ + ++ +I +G R S LT RE E+L+ L Sbjct: 132 DLIESVRIVARGDALLSPEVTRRVIARFSAPAVTGPTRRPSE----LTDREFEVLSLLAK 187 Query: 170 GASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 GASN EIAR L + E TVKTH+ + K+ +++RT AV +A +N Sbjct: 188 GASNAEIARQLVLGETTVKTHVSRILTKLNLRDRTHAVVFAYEN 231 >UniRef50_A4C982 Putative csg operon transcription regulator (LuxR family) protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C982_9GAMM Length = 207 Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 66/116 (56%), Gaps = 9/116 (7%) Query: 103 HINGVFYSMEDQERVVNGLQGVLRGECYFTQK----LASYLITHSGNYRYNSTESAL--- 155 +I G+FY + + ++ G+ +L E +F + S L+ Y+ + ES++ Sbjct: 78 NIKGIFYQNDTPDILLKGISKILNNELWFKRSSICNAFSNLLAQQPKYQ-SQDESSMSLE 136 Query: 156 -LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 LT+RE+ I+ + GA N ++A L IS++TVKTHLY+ F+K +NR + +WA Sbjct: 137 KLTNRERTIIRLVSQGAKNKDVAEKLHISDHTVKTHLYSAFRKTNARNRIELANWA 192 >UniRef50_B1VGA8 Two-component system response regulator n=15 Tax=Actinomycetales RepID=B1VGA8_CORU7 Length = 234 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 8/117 (6%) Query: 96 RDIENWPHINGVFYSMEDQE--RVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTES 153 +D+ V Y ++D +V++G++ RGE ++ L+ N TE+ Sbjct: 117 QDVVGAVSAGAVGYLLKDAPPSKVLDGIRRAARGESVMAPEIMGKLM----GQMTNPTEA 172 Query: 154 ALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 LT RE E+L + G SN +IAR L ++E TVK+HL ++F+K+ NRT AV+ A Sbjct: 173 --LTPRELEVLALVGEGKSNRDIARHLVLTEATVKSHLSHVFRKLGANNRTSAVAVA 227 >UniRef50_C6PN74 ATP-dependent transcriptional regulator, MalT-like, LuxR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PN74_9CLOT Length = 882 Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/65 (49%), Positives = 49/65 (75%), Gaps = 2/65 (3%) Query: 150 STE--SALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAV 207 STE S +++ REKE+L + GA N+EIA++LFI+E+T K+H+ N+F K+ V+NR QAV Sbjct: 814 STEENSEIISKREKEVLMLIESGAKNSEIAKALFITESTTKSHILNIFSKLGVRNRIQAV 873 Query: 208 SWAND 212 + A + Sbjct: 874 AKAKE 878 >UniRef50_B6IT53 Nitrate/nitrite response regulator protein NarL n=1 Tax=Rhodospirillum centenum SW RepID=B6IT53_RHOCS Length = 228 Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 99/212 (46%), Gaps = 15/212 (7%) Query: 12 TLLLITKSSLQATALLQHLKQS-LAITGKLHNIQRSLDDISSG---SIILLDMMEADKKL 67 T LI + L L + L +S I + N++ + G +ILLD++ ++ Sbjct: 5 TAFLIDANKLFREGLKRLLDESPFKIVAEASNVREGVTVADQGLKPDLILLDLVNGGEEE 64 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMED--QERVVNGLQGVL 125 + L + N ++++L T D R + N Y M+D + + L+ V+ Sbjct: 65 AEAMR-RLRQALPNSRMVVLTT--DLCTRRLSNALEAGADGYLMKDLSSDALTQSLRLVM 121 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTESAL----LTHREKEILNKLRIGASNNEIARSLF 181 GE F LA+ LI SG N E + L+ RE +IL L G SN IA L Sbjct: 122 MGEKVFPTHLAALLI--SGRVNGNGLEMPVSRKGLSQREIQILRCLLNGDSNKMIANHLN 179 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 I+E TVK HL +L +KI NRTQA WA +N Sbjct: 180 ITEATVKVHLKSLLRKINASNRTQAAIWALNN 211 >UniRef50_B5WAQ1 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderia RepID=B5WAQ1_9BURK Length = 222 Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 2/93 (2%) Query: 117 VVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESAL--LTHREKEILNKLRIGASNN 174 +V ++ V G C T + + L+ + R ++ LT RE E+L L G N Sbjct: 119 IVASIEAVAAGLCVLTPDILARLLAGTRQPRQKASGEPFEALTSREIEVLAMLADGLGNK 178 Query: 175 EIARSLFISENTVKTHLYNLFKKIAVKNRTQAV 207 EIAR L IS+NTVK HL +F K+ NRT+AV Sbjct: 179 EIARHLDISDNTVKFHLSAIFGKLGATNRTEAV 211 >UniRef50_C5C7H0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=9 Tax=Bacteria RepID=C5C7H0_MICLC Length = 230 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 16/171 (9%) Query: 50 ISSGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNT--PEDYPYRDIENWPHINGV 107 ++ ++L+D+ + I + L R+ + ++++L T ++Y + IE +G Sbjct: 52 VAGADVVLMDVRMPEMDGIEATR-ALLRRPDAPRVVVLTTFDLDEYAFDAIEAG--ASGF 108 Query: 108 FYSMEDQERVVNGLQGVLRGECYFTQKLASYLITH------SGNYRYNSTES-----ALL 156 E ++ ++ V RG+ L+TH S R E A L Sbjct: 109 LLKDAPPEELLAAIRTVHRGDAVIAPSTTRRLLTHMAPRLRSDQVRSAECEEQQAAVASL 168 Query: 157 THREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAV 207 T RE+E+L + GA+N EIA L +SE TVKTH+ + K+ ++R QAV Sbjct: 169 TPREREVLVLMAQGAANLEIAAELVLSEATVKTHVGRVLAKLGARDRVQAV 219 >UniRef50_C6PXX3 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridium carboxidivorans P7 RepID=C6PXX3_9CLOT Length = 215 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 84/159 (52%), Gaps = 4/159 (2%) Query: 53 GSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSME 112 IILLD+ + ++ +H + +S +IK+++++ E+ + + G Sbjct: 47 ADIILLDLNKDNEDELHLISELISS-GKDIKVIIVDFYENNEFFVKALKSGVQGYVLGKS 105 Query: 113 DQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGAS 172 ++E ++ ++ V G+ YF +I + + LLT+RE+EIL ++ G S Sbjct: 106 NEEEILYAIERVYEGKKYFDSYFVDSIINKDTDL---PNKLELLTNREREILIEVAKGLS 162 Query: 173 NNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAN 211 N +I+ FI+ENTVK H+ ++ K+ +K+RT+A + N Sbjct: 163 NPKISEKFFITENTVKKHINHILNKLNIKDRTEAALYWN 201 >UniRef50_A4PHL5 Putative two component regulator n=1 Tax=Streptomyces virginiae RepID=A4PHL5_STRVG Length = 277 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 18/198 (9%) Query: 25 ALLQHLKQSLAITGKLHNIQRSLDD--ISSGSIILLDMMEADKKLIHYWQDTLSRKNNNI 82 ALL+ + + + + R+L D IS +++L + D +LI S+ Sbjct: 90 ALLES-QPGVVVAAEGEPGPRALADLRISCPDVMVLHGVP-DPQLIGLPG---SQDPGGT 144 Query: 83 KILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITH 142 +L + P+ E PH+NG + + ++ G Y + S Sbjct: 145 PLLAVGGPDPA-----EPGPHLNGCLPATVTPADLAAAVRMAAAG--YHLSRRPSRRTAD 197 Query: 143 SGNYR---YNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIA 199 G +R + + LT RE E+L+ + G SN EIA +L +SE+TVK+H+ NL K+ Sbjct: 198 DGGFRRAEVSDVDPDELTARESEVLDLIARGLSNAEIAGALMLSEHTVKSHVQNLLGKLR 257 Query: 200 VKNRTQAVSWAND-NLRR 216 +++R QAV +A + LRR Sbjct: 258 LRSRVQAVVYAYEIGLRR 275 >UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Actinomycetales RepID=D2AUN6_STRRD Length = 226 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 9/145 (6%) Query: 75 LSRKNNNIKILLLNT--PEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFT 132 L R +++L T +DY R + G D ++ G+ V G Y + Sbjct: 69 LRRVAPGTAVVMLTTFGEDDYIARALGEG--AGGFLLKSGDPRELLAGIHAVAEGAAYLS 126 Query: 133 QKLASYLITHSGNYRYNST-----ESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 ++A +IT R + A LT RE+++L + G SN +IAR L++ E TV Sbjct: 127 PRVAHRVITQLTGGRMTRVVAAREQVAALTPRERDVLALVGEGLSNGQIARRLYLVEGTV 186 Query: 188 KTHLYNLFKKIAVKNRTQAVSWAND 212 K H+ + ++ +NR QA A++ Sbjct: 187 KAHVSAILTRLGARNRVQAAILAHE 211 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 8/132 (6%) Query: 81 NIKILLLNT--PEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASY 138 IK+L+L E+Y Y I + G E + + V++G+ F + + Sbjct: 77 GIKVLILTIHDEEEYVYEVIRSGAE--GYIQKDVKPEELKRAIDKVIKGDKVFPRSTENE 134 Query: 139 LITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKI 198 + N +Y E L+ RE+E+L L G SN +IA+ LFISE TVK H+ N+ +K+ Sbjct: 135 -VREVVNEKYEVCE---LSSREQEVLELLAQGMSNKQIAQELFISEKTVKNHVSNILRKL 190 Query: 199 AVKNRTQAVSWA 210 +V +RTQAV A Sbjct: 191 SVNDRTQAVIVA 202 >UniRef50_Q0A822 Two component transcriptional regulator, LuxR family n=2 Tax=Ectothiorhodospiraceae RepID=Q0A822_ALHEH Length = 221 Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 14/173 (8%) Query: 51 SSGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYS 110 S ++LLD+ + + SR + ++L ++ E+ RD+ Y Sbjct: 43 SPPDVVLLDLRMPGSGGLEVLKRIRSRDSELPVVMLTSSDEE---RDLLQALQAGANGYL 99 Query: 111 MEDQE--RVVNGLQGVLRGECYFTQKLASYLI--THSGNYRYNSTES-------ALLTHR 159 ++D E ++ GL+ VL G+ +L L+ G + E+ A LT R Sbjct: 100 VKDAEPAELIQGLEKVLAGQTAVASRLTDTLVQMMAGGRSQREGAEASRPPDPFAALTPR 159 Query: 160 EKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 E+EIL + SN IAR L +S+ TVK H+ ++ +K+ VK+R +A A D Sbjct: 160 EREILMHVARAESNKVIARELGVSDGTVKLHIKSILRKLGVKSRVEAAVKAVD 212 >UniRef50_B9MPQ9 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=B9MPQ9_ANATD Length = 211 Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 44/137 (32%), Positives = 73/137 (53%), Gaps = 9/137 (6%) Query: 78 KNNNIKILLLNT--PEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKL 135 K N+K+++L T EDY + + +G D + +VN + VL G+ +++ Sbjct: 73 KFPNVKVIILTTFCEEDYIKKSLSFGA--DGYILKSSDAKHIVNSILSVLDGKVVMDKEI 130 Query: 136 ASYL---ITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLY 192 A Y+ + + T++ LT RE EI + G SN EIAR LFISE TV+ ++ Sbjct: 131 ALYISDVLKRTSKQLLEKTQN--LTERELEIAKLISQGYSNKEIARMLFISEGTVRNYIT 188 Query: 193 NLFKKIAVKNRTQAVSW 209 ++ +K+ +KNRTQ + Sbjct: 189 SILQKLNLKNRTQIAVY 205 >UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA Length = 218 Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 41/209 (19%) Query: 31 KQSLAITGKLHNIQRSLDDISS--GSIILLDMM-------EADKKLIHYWQDTLSRKNNN 81 K + + G+ N + +L+ ++S ++L+D+M EA +KL + + Sbjct: 25 KADIEVVGQAGNGREALELVASLDPDVVLMDVMMPVMDGVEATRKL--------AERGPR 76 Query: 82 IKILLLNTPED--------------YPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 +++L T D Y +D+++ + D R V G ++ Sbjct: 77 PAVIMLTTFHDDERVLQSIAAGARGYLLKDVDH--------RVLADSIRTVAGGGALIHP 128 Query: 128 E--CYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 + +LAS T S +++LT RE++IL L G +N EI L +S Sbjct: 129 QIIAQLLPRLASLAPTPVTASSSPSDVTSILTPRERDILRLLAQGYTNQEIGEQLALSVG 188 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 TVK HL +F K+AV++RTQA WA ++L Sbjct: 189 TVKNHLSVIFAKLAVRDRTQAALWAREHL 217 >UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5X6_PELCD Length = 223 Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 11/107 (10%) Query: 118 VNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTE-----------SALLTHREKEILNK 166 +N L ++R ++ YL+ + ++ + E A LT RE++IL+ Sbjct: 113 INELADLIRAFSCGEHPMSPYLMDLAVDWHASEQEEESPADKDDESDAFLTRREQQILSC 172 Query: 167 LRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 L G N EI+ +LFIS TVKTH+ N+FKK+ VK+R +AV A + Sbjct: 173 LAQGQGNKEISNALFISTETVKTHIKNIFKKLEVKSRLEAVIAAKEK 219 >UniRef50_C7NKJ2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NKJ2_KYTSD Length = 223 Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 7/94 (7%) Query: 123 GVLR---GECYFTQKLASYLITHSGNYRYNSTESAL-LTHREKEILNKLRIGASNNEIAR 178 GV R GE A++L+T R + E+A +T RE ++L + G +N ++AR Sbjct: 128 GVARAAAGETVLAPAAAAHLVT---GARATTAEAAPRVTDRELQVLRGVARGQTNRQVAR 184 Query: 179 SLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 L I E TVKTHL ++F + V NRT AV A + Sbjct: 185 ELGIGEATVKTHLVHVFTTLGVTNRTAAVGRARE 218 >UniRef50_B7GST9 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B7GST9_BIFLI Length = 289 Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/66 (50%), Positives = 43/66 (65%) Query: 148 YNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAV 207 Y E LLT RE+E+L ++ G SN EIA LFIS TVKTH+ ++ KI ++R QAV Sbjct: 221 YTDPELDLLTDREREVLVEIAHGLSNQEIADKLFISLPTVKTHVAHILAKINARDRVQAV 280 Query: 208 SWANDN 213 +A DN Sbjct: 281 VFAYDN 286 >UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG8_SYMTH Length = 197 Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 4/98 (4%) Query: 117 VVNGLQGVLRGECYF----TQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGAS 172 +V ++ V+ G+ T+ + ++ G E LT RE+EIL + G + Sbjct: 92 LVGAIRAVMEGQAVLDPAVTRAVVEGYVSRPGRAVGQPEEPCPLTPREREILVLIAEGLT 151 Query: 173 NNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 N EIAR L+ISE TV+TH N+ K+ + +RT+ V +A Sbjct: 152 NAEIARRLYISEKTVQTHRSNMLDKLGIHDRTELVRYA 189 >UniRef50_C9ZEX4 Putative respose regulatory protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9ZEX4_STRSW Length = 238 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 9/145 (6%) Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 H + + + + + + +T D R IE G E E + ++ G Sbjct: 99 HGTEGSAAPAPRVLVLTMFDTDADI-SRAIEAG--ATGYLLKAERPEELFAAIRDAASGR 155 Query: 129 CYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVK 188 + +A L+ + R L+ RE EIL +L G N EIAR+LFISE TVK Sbjct: 156 TTLSAPVADRLMAQLRSPRPA------LSEREHEILGQLARGLGNREIARALFISEATVK 209 Query: 189 THLYNLFKKIAVKNRTQAVSWANDN 213 THL ++ K+ V+ R AV+ A + Sbjct: 210 THLGRIYAKLGVETRAGAVAVAKER 234 >UniRef50_B7KH54 Two component transcriptional regulator, LuxR family n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KH54_CYAP7 Length = 228 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 3/108 (2%) Query: 106 GVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNY---RYNSTESALLTHREKE 162 G + + +++ + V+ + Y ++A++ + Y NS + LT REKE Sbjct: 110 GYIFKINLVQQLGEAVNTVMNDKVYLPPEVATHFFHYFNTYCDPLSNSDKELDLTKREKE 169 Query: 163 ILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 +L L G SN +IA+ L+I+ TVK HL +F K+ VKNRTQA+ A Sbjct: 170 VLQYLIQGLSNEQIAKQLYITVATVKAHLTAIFNKLGVKNRTQAIVAA 217 >UniRef50_B4B795 Two component transcriptional regulator, LuxR family n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B795_9CHRO Length = 231 Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 3/108 (2%) Query: 106 GVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITH---SGNYRYNSTESALLTHREKE 162 G + M +++ + V+ + YF ++A+ + N+ + LT REKE Sbjct: 110 GYIFKMNIVQQLGEAINTVMNDKVYFPPEVATQFFHYFNTCSEPLVNAEKKIDLTRREKE 169 Query: 163 ILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 +L L G SN +IA+ L+I+ TVK HL +F K+ VKNRTQA+ A Sbjct: 170 VLQYLIKGLSNEQIAQQLYITVATVKAHLTAIFNKLGVKNRTQAIVAA 217 >UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microscilla marina ATCC 23134 RepID=A1ZEE6_9SPHI Length = 213 Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 4/137 (2%) Query: 79 NNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASY 138 + I IL ++ E Y + + +G F+ ++ ++ G++ + G+ YF Q ++ Sbjct: 76 DQKIIILTMHQKEFYVLKAFDAGA--DGYFHKDTEESELIMGIKKIYNGQKYFCQSVSQI 133 Query: 139 LITHSGNYRYNSTESAL--LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFK 196 LI + + +S ++ L LT REKE+L ++ G N EI L IS TV+ H N+ + Sbjct: 134 LINRLLDTKNSSGKTLLPTLTFREKEVLEQVVAGLGNREIGDKLCISTRTVENHRANILR 193 Query: 197 KIAVKNRTQAVSWANDN 213 K +KN + V +A +N Sbjct: 194 KFGLKNTVELVKFAIEN 210 >UniRef50_A9FBY9 Transcriptional regulatory protein n=2 Tax=Phaeobacter gallaeciensis RepID=A9FBY9_9RHOB Length = 270 Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 46/141 (32%), Positives = 61/141 (43%), Gaps = 6/141 (4%) Query: 74 TLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQ 133 T S + + L P + + ING S+ V L G L G+ T Sbjct: 134 TTSGGDRAAETLSTAPPPELELAETVPADRING---SLPQSGSVPGALTGALTGD---TT 187 Query: 134 KLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYN 193 + ++ S + L+ RE IL KL GA+N IA L I E TVK HL Sbjct: 188 SRSGATVSTDLRRMPASAAACGLSGREWLILTKLIDGATNKSIANELSICEATVKVHLRT 247 Query: 194 LFKKIAVKNRTQAVSWANDNL 214 F+KI KNRTQA WA++ Sbjct: 248 CFRKIGAKNRTQAAIWASEQF 268 >UniRef50_C1TL62 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL62_9BACT Length = 217 Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 64/111 (57%), Gaps = 8/111 (7%) Query: 104 INGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALL---THRE 160 ++G + +++ ++ V RG+CY K+A L+ G + E+ +L T RE Sbjct: 100 VHGFVLKSSGRTELLSAIRSVARGQCYVDPKVAGLLL---GAFHKKQDEADMLCDLTDRE 156 Query: 161 KEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQA--VSW 209 KE+L L G SN EI+ + +SE TVK H+ ++ KK+ +++RTQA ++W Sbjct: 157 KEVLFWLAQGLSNLEISAKMNLSEKTVKNHVSHILKKLDLRDRTQAAILAW 207 >UniRef50_A8TBQ1 Regulatory protein CsgD n=3 Tax=Vibrio RepID=A8TBQ1_9VIBR Length = 213 Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 11/122 (9%) Query: 94 PYRDIEN----WPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYN 149 P ++EN W + G+ + + ++ + +G + + LI NYR++ Sbjct: 83 PSHNVENKLLRWKLLKGILLQSASVDHISESVEYIFQGGLWLPRGYLEALI---NNYRHS 139 Query: 150 S----TESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQ 205 + ++ LT RE++IL L G SN +IA LF+SE+TVK+H+Y L+KK+ V R Sbjct: 140 NISMDSQHDSLTSRERQILELLAYGISNQQIASQLFLSESTVKSHIYKLYKKLDVHCRND 199 Query: 206 AV 207 A+ Sbjct: 200 AI 201 >UniRef50_A6TKJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridiaceae RepID=A6TKJ8_ALKMQ Length = 205 Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 37/100 (37%), Positives = 61/100 (61%), Gaps = 4/100 (4%) Query: 115 ERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNN 174 E ++ L+ VLRG+ + ++ Y + + R NS L T RE+++L +L G SN Sbjct: 108 EDILYALRIVLRGKKFIDPEVIQY---QTSDIRENSHLDEL-TPRERDVLTELGKGLSNF 163 Query: 175 EIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 EI + LFISE+TVK H+ N+ K+ + +RTQA + N+++ Sbjct: 164 EIGKQLFISEHTVKKHVSNILSKLELNHRTQAALFVNNSI 203 >UniRef50_A5G4S9 Response regulator receiver protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G4S9_GEOUR Length = 239 Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 45/118 (38%), Positives = 68/118 (57%), Gaps = 7/118 (5%) Query: 104 INGVFYSMEDQERVVNGLQGVLRGECYFT-QKLASYLITHSGNYRYNSTESAL------L 156 + G FY+ + E ++ GL V GE + + QK+A ++ + R S + L Sbjct: 116 VQGFFYNDDTVETLLKGLTAVFGGEFWVSRQKMAETILENGFRLRRMQIPSHVHIYPHDL 175 Query: 157 THREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 T RE E+L L +G+SN IA LFIS +TV+THL ++FKKI V +R +A WA++ L Sbjct: 176 TQREVELLGLLTLGSSNEVIADKLFISPHTVRTHLNHIFKKINVSSRLEASIWASETL 233 >UniRef50_Q5NWK2 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NWK2_AZOSE Length = 432 Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 66/113 (58%), Gaps = 10/113 (8%) Query: 99 ENWPHINGVFYSMEDQERVVN-GLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLT 157 E W H++ + ++ D++ V+ G LR T+ +A G + E+ L+ Sbjct: 323 EPW-HLHDLLQALADRKCAVSPGYLQNLRAAATRTEPVAP-----KGPLQ---DEAMRLS 373 Query: 158 HREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 +E +IL +L G SN E+AR LF++ENTV+THL ++ K+ +++RTQAV+ A Sbjct: 374 PKEGQILRRLAEGHSNKELARKLFVTENTVETHLRRIYGKLGIRSRTQAVARA 426 >UniRef50_A3W9G2 Transcriptional regulator, LuxR family protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3W9G2_9SPHN Length = 141 Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 33/57 (57%), Positives = 39/57 (68%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 LT RE EIL+ L GASN EIARSL +S NTVKTH+ NL+ K+ V R +AV A Sbjct: 80 LTRRECEILDHLAKGASNKEIARSLGVSPNTVKTHIANLYMKLEVTGRGKAVEAARS 136 >UniRef50_C1I7X4 Two-component system response regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I7X4_9CLOT Length = 226 Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 59/189 (31%), Positives = 96/189 (50%), Gaps = 11/189 (5%) Query: 30 LKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLL 87 ++ L I G+ + + L+++ + +ILLD+ K I + TL +IK+++L Sbjct: 27 FEEDLIICGQFRSGEELLNNMKNYNPDVILLDINMPGKNGIETLK-TLKILYPDIKVVML 85 Query: 88 NTPEDYPYRDIENWPHINGVFYSMEDQ--ERVVNGLQGVLRGECYFTQKL--ASYL-ITH 142 D + I I Y +++ +VN ++ V GE Y + L A +L I Sbjct: 86 TVENDK--KTIMESIDIGADAYILKESAGSEIVNAIRNVYLGEKYIDKSLIKAIFLDIKS 143 Query: 143 SGNYRYNSTES-ALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVK 201 + ES LLT+RE IL ++ G N EIA LF+SE TVK ++ ++FKKI V+ Sbjct: 144 DVACKNKEIESLKLLTNRELNILYEISKGLKNKEIAEKLFLSEKTVKNYITSIFKKIEVE 203 Query: 202 NRTQAVSWA 210 +R QA +A Sbjct: 204 DRVQATIYA 212 >UniRef50_A5V148 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=A5V148_ROSS1 Length = 216 Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 24/168 (14%) Query: 55 IILLDM-------MEADKKLIHYWQDTLSRKNNNIKILLLNT--PEDYPYRDIENWPHIN 105 IIL+D+ +EA + +I W + +I++L T +DY ++ + Sbjct: 54 IILMDVQMPVMNGVEAIRAIIAAW--------SQARIIVLTTFDRDDYVFQSV----RAG 101 Query: 106 GVFYSMEDQ--ERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESAL-LTHREKE 162 + Y ++D E ++ ++ V GE + ++AS + + R + L+ RE+E Sbjct: 102 AMGYLLKDAPAEALLQTIRRVHAGEVFIQPEIASRTLREAATGRRRAGTIPFDLSERERE 161 Query: 163 ILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 +L L G SN EIA L I+E TVK H+ N+ K+ +NRTQA + A Sbjct: 162 VLVLLAQGLSNREIAGRLSITEGTVKNHVSNILAKLQAENRTQAANIA 209 >UniRef50_Q07KU0 Two component transcriptional regulator, LuxR family n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07KU0_RHOP5 Length = 268 Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 33/73 (45%), Positives = 43/73 (58%) Query: 140 ITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIA 199 + S S E LL+ RE+ IL+ L G SN +IAR I+E TVK H+ ++ +KI Sbjct: 183 VRSSDRASVRSPEFPLLSGREEAILDGLVRGLSNKQIARECSITEATVKVHMKSILRKIR 242 Query: 200 VKNRTQAVSWAND 212 V NRTQA WA D Sbjct: 243 VSNRTQAAIWALD 255 >UniRef50_A8M495 Two component transcriptional regulator, LuxR family n=3 Tax=Micromonosporaceae RepID=A8M495_SALAI Length = 270 Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 52/116 (44%), Gaps = 7/116 (6%) Query: 93 YPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTE 152 P NWP G VV V RG+ + + G + Sbjct: 153 APADPSANWPA--GAAEGPGGSPTVVP----VQRGD-DPAEPAGELAVVPGGGTTREARP 205 Query: 153 SALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVS 208 S LT RE ++L + G SN EI R LF+SE+TVKTH LF+K+ ++R AV+ Sbjct: 206 SVGLTERELQVLLGMAEGKSNAEIGRELFVSEDTVKTHARRLFRKLGARDRAHAVA 261 >UniRef50_Q0FEN9 DNA-binding response regulator, LuxR family protein n=6 Tax=Rhodobacterales RepID=Q0FEN9_9RHOB Length = 222 Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 32/55 (58%), Positives = 42/55 (76%) Query: 155 LLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSW 209 +LT REK IL L G+SN E+A S+ IS NTVK HL NL++K+ VKNR+QA+S+ Sbjct: 147 MLTKREKIILQFLADGSSNKELAESMKISINTVKFHLSNLYEKLGVKNRSQAISF 201 >UniRef50_B1ZKW0 Two component transcriptional regulator, LuxR family n=7 Tax=Alphaproteobacteria RepID=B1ZKW0_METPB Length = 263 Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 32/68 (47%), Positives = 43/68 (63%) Query: 143 SGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKN 202 +G R + T + L+ RE IL L +G SN IAR+L I+E TVK H+ + +K+ VKN Sbjct: 150 TGLQRADGTSLSSLSSREVNILEGLALGESNKVIARNLDIAEATVKVHVKAILRKVRVKN 209 Query: 203 RTQAVSWA 210 RTQA WA Sbjct: 210 RTQAAVWA 217 >UniRef50_Q0FFK6 DNA-binding response regulator, LuxR family protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FFK6_9RHOB Length = 205 Score = 62.8 bits (151), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 5/95 (5%) Query: 118 VNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIA 177 +N ++ +L GE Y L S S N + ++ RE + L +L IG SN EIA Sbjct: 112 INAIKFILSGERYLPFDLVS-----SAPASKNHDDFTNVSAREMQTLEQLCIGLSNKEIA 166 Query: 178 RSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 R+L I E TVK H+ N+F K+ V NRTQA +A + Sbjct: 167 RNLDIQEVTVKLHVKNIFSKLGVSNRTQAALFAKE 201 >UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes RepID=LIAR_BACSU Length = 211 Score = 62.8 bits (151), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 15/169 (8%) Query: 52 SGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYS- 110 S +IL+D++ I + + R+ ++ KI++L + D D + +P I S Sbjct: 47 SPDVILMDLVMEGMDGIEATK-QICRELSDPKIIVLTSFID----DDKVYPVIEAGALSY 101 Query: 111 ---MEDQERVVNGLQGVLRGECYFTQKLASYLIT---HSGNYRYNSTESALLTHREKEIL 164 + + ++ +GE K+A +++ HSG N+ LT RE EIL Sbjct: 102 LLKTSKAAEIADAIRAASKGEPKLESKVAGKVLSRLRHSGE---NALPHESLTKRELEIL 158 Query: 165 NKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 + G +N EI LFI+ TVKTH+ N+ K+ V +RTQA +A+ N Sbjct: 159 CLIAEGKTNKEIGEELFITIKTVKTHITNILSKLDVSDRTQAAVYAHRN 207 >UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paenibacillaceae RepID=C0ZBD9_BREBN Length = 215 Score = 62.8 bits (151), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 11/99 (11%) Query: 118 VNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTES------ALLTHREKEILNKLRIGA 171 +N L +L + T+++A+ L+ YR+ E+ A+LT RE+EI+ + G Sbjct: 114 INYLHALLGEDSELTREMATRLM-----YRFRQEEATDEMVPAVLTPREREIVMYVGAGK 168 Query: 172 SNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 +N EI+ +L I+ENTVK HL N+ +K+ + NR Q ++A Sbjct: 169 TNREISEALIIAENTVKNHLKNILEKLQLANRVQLAAYA 207 >UniRef50_B2A8K6 Two component transcriptional regulator, LuxR family n=9 Tax=Clostridia RepID=B2A8K6_NATTJ Length = 228 Score = 62.8 bits (151), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 25/198 (12%) Query: 30 LKQSLAITGKLHNIQRSLDDIS--SGSIILLDM-------MEADKKLIHYWQDTLSRKNN 80 +++ LA+ G+ N + +D + +IIL+D+ +EA K + +T Sbjct: 31 MEEDLAVCGEAQNGEEVVDKVKLLKPNIILMDINMPLLNGVEATKYVKEVSPET------ 84 Query: 81 NIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLI 140 + L ++ E+Y + ++ G + +V +Q V +G + + L+ Sbjct: 85 KVIALTIHEDEEYLFEIVKEGAA--GFLLKDVETPTLVQAIQEVNKGNSFIHPTITHKLL 142 Query: 141 THSGNYRYNS-----TESAL---LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLY 192 NS ++ A+ LT REKEIL + G +N EI++ L+ISE TVK H+ Sbjct: 143 GEFNRLAQNSPRNIKSDEAVQSELTGREKEILELMAQGYTNKEISKELYISEKTVKNHVS 202 Query: 193 NLFKKIAVKNRTQAVSWA 210 N+ +K+ V +RTQAV A Sbjct: 203 NILRKMDVTDRTQAVITA 220 >UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B0G6_SYNWW Length = 213 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 1/96 (1%) Query: 118 VNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIA 177 V+ + V+ GE ++A+ L+ +E LT REK++L L G +N E+A Sbjct: 113 VDTIHRVMNGEVVIYPRVANRLVRELRQSENRKSE-IRLTKREKDVLTLLVKGNTNKEMA 171 Query: 178 RSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 +FISE TVK HL ++F+K+ VK+RT A +A N Sbjct: 172 EVMFISEKTVKNHLTSIFRKLGVKDRTHAAIYALKN 207 >UniRef50_B6IS42 Transcriptional regulator, LuxR family protein n=1 Tax=Rhodospirillum centenum SW RepID=B6IS42_RHOCS Length = 216 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/59 (52%), Positives = 40/59 (67%) Query: 155 LLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 LLT RE+EIL+ L G SN +IA L ++E+TVK H L +K+ V+NRTQA WA N Sbjct: 152 LLTVREREILSCLLGGGSNKDIASRLNVAESTVKMHFKALLRKLRVQNRTQAAMWALSN 210 >UniRef50_D1C1C8 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1C1C8_SPHTD Length = 237 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/98 (38%), Positives = 57/98 (58%), Gaps = 4/98 (4%) Query: 116 RVVNGLQGVLRGECYFTQKLASYLITHS---GNYRYNSTESALLTHREKEILNKLRIGAS 172 +V++ ++ V RGE +LA+ L+ +R T A LT RE ++L + G S Sbjct: 131 KVIDAIRAVARGESVIEPQLATKLLNEFRRISEFREEET-VAGLTEREIQLLRLVASGMS 189 Query: 173 NNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 N EIA L ++E+TVK L LF+K+ VK+RTQA +A Sbjct: 190 NKEIAAELSLAESTVKNRLSLLFEKLDVKDRTQAAIYA 227 >UniRef50_C1B6P0 Putative LuxR family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1B6P0_RHOOB Length = 127 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/53 (56%), Positives = 38/53 (71%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVS 208 LT RE EIL + GASN EI R LFIS NTV+ H+ N+ +K++V NRT AV+ Sbjct: 66 LTGREHEILGMIADGASNAEIGRDLFISRNTVRFHVSNILRKMSVNNRTAAVA 118 >UniRef50_B1WQK4 Two-component response regulator n=19 Tax=Cyanobacteria RepID=B1WQK4_CYAA5 Length = 247 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 3/98 (3%) Query: 115 ERVVNGLQGVLRGECYFTQKLASYLITH--SGNYRYNSTESALLTHREKEILNKLRIGAS 172 ER++ ++ G Y ++A ++ + S N N ALL+ RE E+L + G S Sbjct: 145 ERLLAAIEAAQDGATYLDPQIARLVLDNLKSPNPEPNQN-IALLSERELEVLKLIVEGKS 203 Query: 173 NNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 NNEIA L++S NT+KTH+ + K+AV +R QA A Sbjct: 204 NNEIAEDLYLSTNTIKTHVRGIMNKLAVDDRVQAAVVA 241 >UniRef50_A4XVC8 Regulatory protein, LuxR n=7 Tax=Pseudomonas aeruginosa group RepID=A4XVC8_PSEMY Length = 907 Score = 62.4 bits (150), Expect = 1e-08, Method: Composition-based stats. Identities = 28/56 (50%), Positives = 43/56 (76%) Query: 152 ESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAV 207 E+ ++HRE+EIL + G SN +IA+++ +SE T+K HL+NLF K+ V++RTQAV Sbjct: 840 ENQDVSHREREILRLVAAGLSNRDIAQTVHLSEATIKWHLHNLFSKLGVRSRTQAV 895 >UniRef50_B2IW90 Two component transcriptional regulator, LuxR family n=3 Tax=Cyanobacteria RepID=B2IW90_NOSP7 Length = 226 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 7/133 (5%) Query: 83 KILLLNT--PEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLI 140 K+L+L+ +D+ +R ++ G + ++ + V R E Y ++AS Sbjct: 88 KVLVLSAHQEDDWIFRAMQAGA--AGYVFKNRVATQLCEAIDTVTRAEIYLPSEVASRFF 145 Query: 141 THSGNYRYNSTESAL---LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKK 197 Y + ++ LT RE+E+L L GASN EIA+ L+++ TVK HL ++F+K Sbjct: 146 RFFQAYSDSCLKACHEVHLTEREQEVLYWLTQGASNEEIAKHLYVTVATVKAHLTSIFEK 205 Query: 198 IAVKNRTQAVSWA 210 + V +RTQA+ A Sbjct: 206 LKVTSRTQAIVAA 218 >UniRef50_C4ZEG3 Two-component response regulator (Extracellular proteinase response regulator) n=3 Tax=Bacteria RepID=C4ZEG3_EUBR3 Length = 214 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 8/141 (5%) Query: 74 TLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQE--RVVNGLQGVLRGECYF 131 L + + +K+L+L + Y ING Y ++D E + + + GE Y Sbjct: 69 ALKDRKSKVKVLVLTVHNETEYLMKAVDIGING--YVLKDSESAELKKAIFTIADGETYI 126 Query: 132 TQKLASYLITHSGNYRYNSTESAL--LTHREKEILNKLRIGASNNEIARSLFISENTVKT 189 L L +S + N E + LT RE E+L ++ +G N +IA+ + ISE TVK Sbjct: 127 QPSLIPAL--NSKMIQKNEDELKIDALTKREMEVLKEMAVGKFNRDIAKEMKISERTVKN 184 Query: 190 HLYNLFKKIAVKNRTQAVSWA 210 H+ ++FKK+ V +RTQA +A Sbjct: 185 HISSIFKKLEVTDRTQAAVFA 205 >UniRef50_C6PMI5 Transcriptional regulator, LuxR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PMI5_9CLOT Length = 242 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 29/56 (51%), Positives = 40/56 (71%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAN 211 LT+REKEI + +G SN EI LFIS NTVK H+YN++KK+ VKN+ + ++ N Sbjct: 184 LTNREKEIAGYICMGLSNKEIGEKLFISANTVKNHVYNIYKKVNVKNKVELINLIN 239 >UniRef50_A5GTX7 Possible two component system response regulator n=1 Tax=Synechococcus sp. RCC307 RepID=A5GTX7_SYNR3 Length = 235 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 47/139 (33%), Positives = 62/139 (44%), Gaps = 29/139 (20%) Query: 99 ENWPH-INGVFYSMEDQERVVN----GLQGVL------RGECYFTQKLASYLITHSGNYR 147 + WP I +F E QE V G QGV+ GE F + +A L G Y Sbjct: 90 QRWPQCICLLFLRRETQEVVREALDAGAQGVIFVSSLGSGEGDFMKAIARTL--EGGTYF 147 Query: 148 YNSTESAL----------------LTHREKEILNKLRIGASNNEIARSLFISENTVKTHL 191 A L+ RE+E+L L G N EIA+ LFIS+ TVKTH+ Sbjct: 148 PGPVRDAAAFHPDDEAEGLEALDQLSSREQEVLQALSEGYCNREIAQRLFISQETVKTHV 207 Query: 192 YNLFKKIAVKNRTQAVSWA 210 + K+ V++RTQA A Sbjct: 208 STVISKLGVRDRTQAAVMA 226 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 10/161 (6%) Query: 55 IILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNT--PEDYPYRDIENWPHINGVFYSME 112 IIL+D+M ++ SR ++KI++L + +D + +E V Y ++ Sbjct: 65 IILMDLMMPGMNGAEATKEVRSR-FPDMKIVILTSFLEDDLVVQAVEA----GAVSYVLK 119 Query: 113 --DQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIG 170 E ++ LQG RG T ++A L T R + + +T REKE+L + G Sbjct: 120 TVSAEELIYALQGAYRGMPVMTGEVAQAL-TRGLRQRTVQGDDSGMTEREKEVLLLIAEG 178 Query: 171 ASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAN 211 SN +IA L IS TVKTH+ NL K +++RTQ +A+ Sbjct: 179 KSNKDIAEELHISIKTVKTHVSNLLMKCELEDRTQLAIYAH 219 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 6/107 (5%) Query: 109 YSMEDQER--VVNGLQGVLRGECYFTQKLASYLI---THSGNYRYNSTESALLTHREKEI 163 Y ++D R ++ ++ VLRGE + L + H+ ++T LT RE+++ Sbjct: 113 YLLKDASRREIIGAVRQVLRGEAFLNPDLVLQTLRRLAHA-TPTDDATPIEPLTPREQQV 171 Query: 164 LNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 L L G +N EIAR L IS TVK H+ ++ K+ V +RTQA A Sbjct: 172 LRLLMQGKTNREIARELIISPGTVKVHVEHIIAKLGVSDRTQAAVRA 218 >UniRef50_B8FX94 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FX94_DESHD Length = 212 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 89/170 (52%), Gaps = 8/170 (4%) Query: 42 NIQRSLDDISSGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENW 101 N+ R+LD I+L+D+ + + + R+N I IL+L T +D + + Sbjct: 41 NVSRTLD----FDILLMDLNMPGVNGLEACR-VIRRENETIGILVL-TVDDSDEKVFQVL 94 Query: 102 P-HINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHRE 160 + G D + +++ ++ V G+ + + L+ + N ++ L+ RE Sbjct: 95 QLGVAGYLLKDVDPKTLIDSIRKVHSGQPILSPAVTGKLLGQLVHPTQNR-DTCGLSDRE 153 Query: 161 KEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 +IL + G+SN EI ++LFISE TVK HL ++F+K+AV++RTQA A Sbjct: 154 LQILTYVVKGSSNREIGQALFISEKTVKNHLSSIFRKLAVEDRTQAALKA 203 >UniRef50_D2Q428 Two component transcriptional regulator, LuxR family n=9 Tax=Actinobacteria (class) RepID=D2Q428_9ACTO Length = 213 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 3/98 (3%) Query: 118 VNGLQGVLRGECYFTQKLASYLI-THSGNYRYNSTESAL--LTHREKEILNKLRIGASNN 174 V+ + V G+ F+ +LA +++ SG S + L L+ RE+E+L + G + Sbjct: 112 VDAIGRVADGDAVFSPRLAGFVLDAFSGAIDIASVDEDLDRLSQREREVLRLIARGYAYK 171 Query: 175 EIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 E+AR LFIS TV+TH+ ++ +K+ + NR + WA D Sbjct: 172 EVARELFISVKTVETHVSSVLRKLQLSNRHELTRWATD 209 >UniRef50_D1CF52 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=D1CF52_THET1 Length = 1648 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 4/92 (4%) Query: 121 LQGVLRGECYFTQKLASYLITH-SGNYRYNSTESALLTHREKEILNKLRIGA-SNNEIAR 178 L+ V+RGE T +LA LI S R +S + +LT RE+EIL L G S +++R Sbjct: 1551 LRNVIRGEPAITPRLAGKLIDEFSRPVRSSSLQ--MLTDREQEILQLLVNGVTSTKDLSR 1608 Query: 179 SLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 L +SE+TVK HL N+ K+ +++R Q V+WA Sbjct: 1609 QLGVSEHTVKYHLRNILSKLHLQSRAQVVAWA 1640 >UniRef50_C5CKC0 Two component transcriptional regulator, LuxR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CKC0_VARPS Length = 227 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 26/189 (13%) Query: 46 SLDDISSGS-------IILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDI 98 S+D++ +G+ +I L+M AD + H D + R++ + +++L+ ED Sbjct: 34 SVDELLAGATDELDLALIDLNMPGADGQ-AHI--DEIRRRHPAVPVIVLSGYEDPAIMRS 90 Query: 99 ENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKL---------ASYLITHSGNYRYN 149 + G E +++ ++ VL G Y + A T +G+ R Sbjct: 91 ALERGVLGFIPKAYSPEVMLSAVRLVLAGGVYVPPMMLTALPPGIVAGVAPTQNGDARSA 150 Query: 150 STES-------ALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKN 202 S ++LT R+ E+L L G N I RSL ISE TVK HL +F+ + V+N Sbjct: 151 GASSQTLEHLRSVLTERQVEVLQLLSQGKPNKLIGRSLGISEGTVKIHLAAIFRALNVRN 210 Query: 203 RTQAVSWAN 211 RT+AV A Sbjct: 211 RTEAVVAAQ 219 >UniRef50_A5CSF7 Putative two-component system, response regulator n=1 Tax=Clavibacter michiganensis subsp. michiganensis NCPPB 382 RepID=A5CSF7_CLAM3 Length = 224 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 19/163 (11%) Query: 57 LLDMMEADKKLIHYWQDTLSRKNNNIKILLLNT--PEDYPYRDIENWPHINGVFYSMEDQ 114 +LD +EA ++L+ + +IL L T + Y R + V + ++D Sbjct: 65 VLDGIEATRRLVEGG------RAEGTRILGLTTHDTDSYAIRMLRA----GAVGFLLKDS 114 Query: 115 ERV--VNGLQ----GVLRGECYFTQKLASYL-ITHSGNYRYNSTESALLTHREKEILNKL 167 V V+ ++ G TQ+L L + + ++ +LT RE+ + +L Sbjct: 115 TAVQLVDAIRSVHNGTFAASMSTTQRLLERLAVERTAPPDPDTAALDVLTDRERVVFTRL 174 Query: 168 RIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 GASN EIAR L I+E TVKTH+ ++ K+AV++R V WA Sbjct: 175 VTGASNPEIARDLSIAEVTVKTHVGHILTKLAVRDRVHLVIWA 217 >UniRef50_B1HZD2 ComA, srfB, comAA; two-component response regulator. potential cognate sensor kinase is comP n=2 Tax=Bacillaceae RepID=B1HZD2_LYSSC Length = 208 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 72/140 (51%), Gaps = 2/140 (1%) Query: 73 DTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFT 132 + + +K + I+L E Y ++ I+G+ + +E+V+ +Q LRGE Sbjct: 66 EMIKKKQPDALIILYTGYELSDYYELLIEKKIDGLLSKLATKEQVIQTIQAALRGEILLA 125 Query: 133 QKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLY 192 ++ S NS + LL+ +E+EIL + G +N IA ++ +++ TV+ +L Sbjct: 126 ADFLDFVQQRSN--LPNSRQEVLLSDKEQEILQLVAQGCTNKAIASAIGVTQRTVENYLS 183 Query: 193 NLFKKIAVKNRTQAVSWAND 212 LF K+ V++R +AV A + Sbjct: 184 KLFVKLNVESRAEAVIVAKE 203 >UniRef50_D1CB75 Two component transcriptional regulator, LuxR family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CB75_THET1 Length = 225 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/100 (38%), Positives = 58/100 (58%), Gaps = 2/100 (2%) Query: 113 DQERVVNGLQGVLRGECYFTQKLASYLITH-SGNYRYNSTESALLTHREKEILNKLRIGA 171 D R + L+ V+ GE FT LA L++ + Y + ALLT RE+EIL+ L G Sbjct: 108 DYARFIYVLRRVIHGEITFTPDLARKLVSELTTRYSSKNEPFALLTSREREILSLLVHGV 167 Query: 172 SNN-EIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 S+ ++A L ++E+TVK H N+ K+ +KNR Q ++A Sbjct: 168 SSTRDLAEKLGVTEHTVKFHFRNILSKLHLKNRAQVAAYA 207 >UniRef50_A8LG56 Two component transcriptional regulator, LuxR family n=4 Tax=Actinomycetales RepID=A8LG56_FRASN Length = 244 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 5/159 (3%) Query: 55 IILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPE--DYPYRDIENWPHINGVFYSME 112 ++++D+ + ++ L+ + KIL+L T E DY Y + + NG Sbjct: 77 VVIMDIRMPRVDGLAAIREILADVADPPKILVLTTFELDDYVYEALRSG--ANGFLLKRA 134 Query: 113 DQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNST-ESALLTHREKEILNKLRIGA 171 +V ++ ++ E + Y+ N + T A+LT RE ++L + G Sbjct: 135 RPAEIVQAVRTIVSSESLLFPEAIRYMAGKRPNREAHETMRRAVLTDREADVLRLISEGL 194 Query: 172 SNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 SNNEIA L++ TVK+H+ ++ K+ ++RTQAV A Sbjct: 195 SNNEIANRLYLGAQTVKSHVSSVLAKLGARDRTQAVIIA 233 >UniRef50_C8W5L1 Transcriptional regulator, LuxR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W5L1_DESAS Length = 224 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 30/58 (51%), Positives = 41/58 (70%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 LT RE EIL + I SN EIA+ LFISE TVKTH+ N+ +K+ +NR+QA+ ++ N Sbjct: 160 LTRREMEILQLIAISLSNREIAKRLFISEPTVKTHVSNILRKLGQQNRSQAIVYSYKN 217 >UniRef50_C1YGP4 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1YGP4_NOCDA Length = 225 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 13/118 (11%) Query: 109 YSMED--QERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNST-----------ESAL 155 Y ++D E +V ++ V RGE A L+ G E+ Sbjct: 105 YLLKDVPPEELVAAIRRVARGETVLGGPAAELLVAALGEGPSTVPAADPPRPPGHGEAPR 164 Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 L+ RE+E+ + GA+N E+AR+LFI+E T K H+ ++ +K+ +++RT+ W + Sbjct: 165 LSEREEEVARLVGTGATNREVARALFITEGTAKNHVTSILRKLGLRDRTRLALWVRER 222 >UniRef50_Q24VY5 Putative uncharacterized protein n=2 Tax=Desulfitobacterium hafniense Y51 RepID=Q24VY5_DESHY Length = 228 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 3/97 (3%) Query: 114 QERVVNGLQGVLRGECYFTQKLASYL---ITHSGNYRYNSTESALLTHREKEILNKLRIG 170 +E +V ++ RGE YF+Q +A YL + + + + ALLT RE EIL + G Sbjct: 126 KEEMVTAIRKAARGESYFSQSMAPYLKEELVGTPQQDPHDDKMALLTSREVEILKLVVTG 185 Query: 171 ASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAV 207 + EIA +L I++ TV H+ N+ K+ VK+R + V Sbjct: 186 LRSKEIAENLRITKRTVDYHIGNILLKLEVKSRMEIV 222 >UniRef50_C6CRD5 Transcriptional regulator, LuxR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CRD5_PAESJ Length = 682 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 28/54 (51%), Positives = 43/54 (79%) Query: 154 ALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAV 207 +LL+ RE+E+L+++ +G SN E+AR L +SE TVK HL N+F+K+ VK+RTQ + Sbjct: 622 SLLSRREREVLDRVILGRSNLELARDLCLSEVTVKKHLANIFRKLEVKSRTQLI 675 >UniRef50_C5C4U8 Two component transcriptional regulator, LuxR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C4U8_BEUC1 Length = 216 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 28/58 (48%), Positives = 41/58 (70%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 L+ RE+++L L G SN EIAR LF++E+TVKTH+ +L +K+ V++R V WA N Sbjct: 156 LSPRERDVLALLARGFSNAEIARELFVAESTVKTHVSSLTRKVGVRDRLHVVVWAYRN 213 >UniRef50_A0K2K2 Two component transcriptional regulator, LuxR family n=9 Tax=Actinomycetales RepID=A0K2K2_ARTS2 Length = 218 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 6/85 (7%) Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 G ++A+ L+ R + E AL + RE ++L L G N IAR LFISE T Sbjct: 132 GGTALAPEVAARLVG-----RIRNPEPAL-SAREIQLLQLLATGLPNRAIARRLFISEAT 185 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWAN 211 VKTHL +++ K+ V NRT A+S A Sbjct: 186 VKTHLVHIYGKLGVDNRTAAISVAT 210 >UniRef50_A8KZP9 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=A8KZP9_FRASN Length = 398 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 21/163 (12%) Query: 65 KKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHI------NGVFYSMEDQERVV 118 + L+ DT +IL+L T D++ + H +G E ++ Sbjct: 220 RMLLESNPDTEVAGGGRSRILILTT------FDLDEYVHAALRAGASGFLLKDAYPEELL 273 Query: 119 NGLQGVLRGECYFTQKLASYLI----THSGNYRYNSTESA-----LLTHREKEILNKLRI 169 G++ V G+ LA L+ H G+ + +A LT RE+EIL + Sbjct: 274 AGIRAVAVGDAVIAPALARRLLDAFAQHLGDALPDGERAADPRLDTLTEREREILVAIGH 333 Query: 170 GASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 G +N EIA L +SE+TVKTH+ + KI ++R QAV A D Sbjct: 334 GWTNGEIAERLVLSESTVKTHVGRMLAKIGARDRVQAVICAYD 376 >UniRef50_A2SE70 ATP-dependent transcriptional regulator-like protein protein n=2 Tax=Methylibium petroleiphilum PM1 RepID=A2SE70_METPP Length = 933 Score = 61.6 bits (148), Expect = 2e-08, Method: Composition-based stats. Identities = 30/55 (54%), Positives = 39/55 (70%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 L+ REKE+L L G +N EIA LF+SENTVK HL N++ K+ V NR QA++ A Sbjct: 872 LSEREKEMLRFLLDGTTNREIAGRLFVSENTVKFHLKNIYSKLGVGNRLQAINTA 926 >UniRef50_C9XUR7 Putative HTH-type transcriptional regulator yhjB n=1 Tax=Cronobacter turicensis RepID=C9XUR7_CROTZ Length = 218 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 31/217 (14%) Query: 13 LLLITKSSLQATA------LLQHLKQSLAITGKLHNIQRSLDDIS--------------- 51 L L+ S ATA +L KQS+ I G +++ + +I+ Sbjct: 2 LFLLIDSPTSATAWRFTMNVLMVDKQSIFIEGMASVLKQFIPEITICGLNNPDEINTTLG 61 Query: 52 --SGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFY 109 S+ILLD +A K + D L++++ + ++LL + H+ Sbjct: 62 YFPASLILLDG-DAGKSVNIDLLDDLAQRHPALPVVLLVNQCQPALLRLFLRHHVAAFVR 120 Query: 110 SMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRI 169 E +V L+ G F Q+ S L + G A L+ R++EIL L Sbjct: 121 RDSPPEAIVQTLRAAAMGMLCFPQESISLLDSGPGTL-------ARLSERQREILKLLAA 173 Query: 170 GASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQA 206 G SN +I+R L IS TVK HL ++F+++ V NRTQA Sbjct: 174 GESNKQISRHLNISAGTVKAHLESIFRRLNVTNRTQA 210 >UniRef50_C5CCY4 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=5 Tax=Bacteria RepID=C5CCY4_MICLC Length = 209 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 14/138 (10%) Query: 81 NIKILLLNTPEDYPYRDIENWPHINGVFYSMED--QERVVNGLQGVLRGECYFTQKLASY 138 +++L+L T + DI + Y ++D E + + ++ G ++A+ Sbjct: 79 GVQVLILTTFDTEA--DILAAVNAGAAGYLLKDAPSEEIASAVRQAAAGRKALAPQVAAT 136 Query: 139 LITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKI 198 L+ S S +L+ RE E+L + GA+N A+ LFISE TVKTHL ++F+K+ Sbjct: 137 LMGR------MSGGSEVLSEREIELLELIARGATNKVAAKELFISEATVKTHLVHIFQKL 190 Query: 199 AVKNRTQAVSWANDNLRR 216 V NRT+AV D RR Sbjct: 191 GVDNRTRAV----DEARR 204 >UniRef50_Q0VLI2 Transcription regulator, putative n=1 Tax=Alcanivorax borkumensis SK2 RepID=Q0VLI2_ALCBS Length = 203 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 9/108 (8%) Query: 104 INGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESAL-LTHREKE 162 +NG E E+++ ++ ++ G YF++ S+ + + E AL LT ++ Sbjct: 98 VNGFVDKSESVEQILFAIREIMAGRSYFSE---SFRLMAGA-----APEEALTLTRQQLA 149 Query: 163 ILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 IL L+ G N EIAR LF+S NT+KTHL L++K+ V NRT + A Sbjct: 150 ILTMLQEGHGNKEIARQLFVSVNTIKTHLRLLYEKLDVPNRTACIEKA 197 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 13/171 (7%) Query: 49 DISSGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLL---NTPEDYPYRDIENWPHIN 105 D I++LD+ K I + + + NN +K ++L + PE Y + +++ Sbjct: 47 DTLDPEIVVLDITMPKKSGIEVITE-VKKYNNRVKFIVLSMHDNPE-YVLKSVQS----G 100 Query: 106 GVFYSME--DQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRY--NSTESALLTHREK 161 + Y ++ D E ++ ++ V G+ YF+ + S ++ N S + LT RE Sbjct: 101 ALSYLLKNTDHEEIIKAVKAVSAGQKYFSPDIYSIILNGLANPELVKASQIAETLTKREL 160 Query: 162 EILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 E+L ++ +G S IA LFIS TV+TH NL KK+ V N + + A D Sbjct: 161 EVLKEVSMGLSTKLIADKLFISVRTVETHRINLMKKLDVHNSAELIKKAMD 211 >UniRef50_C6CXC3 ATP-dependent transcriptional regulator, MalT-like, LuxR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CXC3_PAESJ Length = 866 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/57 (50%), Positives = 40/57 (70%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 LT RE+E+L K+ G SN EI LF+S TVK + YN+++K+ VKNR QA+S A + Sbjct: 806 LTGREREVLRKIGEGLSNEEIGGQLFLSTGTVKKYAYNIYEKLQVKNRVQAISRAKE 862 >UniRef50_B4EJM2 Two-component regulatory system, response regulator protein n=3 Tax=Burkholderia RepID=B4EJM2_BURCJ Length = 215 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 4/97 (4%) Query: 115 ERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTES-ALLTHREKEILNKLRIGASN 173 ER++ + + GE +A +I G R A LT RE E+L L G SN Sbjct: 112 ERLLQAIHAAVHGEPTLHPGIAQRMI---GALRKPPRNPFAALTARELEVLRCLAEGGSN 168 Query: 174 NEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 IA +L I+E TVKTHL N+ K+ + +RTQAV+ A Sbjct: 169 ARIAATLGITEKTVKTHLGNVMSKLHLSDRTQAVALA 205 >UniRef50_B8K627 Sigma-70, region 4 family n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8K627_VIBPA Length = 221 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 68/126 (53%), Gaps = 1/126 (0%) Query: 84 ILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHS 143 +++ + PE ++ + + G+ Y + + L V + + +KL ++ Sbjct: 85 LIVYDVPETGVDIELCRYRGLKGILYQEAPIDHLFRCLDAVSNNDMWLPRKLMVKMLNEF 144 Query: 144 GNYRYNSTE-SALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKN 202 Y N E + LT RE++ L ++ G SN EIA +LF++E+TVKTH+Y L+KK+ V+ Sbjct: 145 RPYAINYQELNTTLTKREQQTLERIIQGQSNLEIAEALFVAESTVKTHVYKLYKKLNVRC 204 Query: 203 RTQAVS 208 R + ++ Sbjct: 205 RKEVIN 210 >UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD Length = 220 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 54/88 (61%), Gaps = 3/88 (3%) Query: 127 GECYFTQKLASYLITHSGNYRYNSTESAL--LTHREKEILNKLRIGASNNEIARSLFISE 184 GE + ++A ++T+ + + ++A LT RE+E+L + G SN EIA++LF+S Sbjct: 128 GEAIYGPEIARRVLTYFADM-PDPKQTAFPELTEREREVLQLIAQGRSNGEIAQTLFLSP 186 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWAND 212 TV+ H+ N+F K+ V +R QA+ A + Sbjct: 187 KTVRNHVSNIFMKLHVADRAQAIVLARE 214 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 12/150 (8%) Query: 73 DTLSRKNNNIKILLLNT--PEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECY 130 D +S+K + K+L+L+ E Y + +E + G D++ + + V G+ Y Sbjct: 69 DVISKKYPDSKVLILSMHDNETYILKSVEAGAY--GYLLKDVDKDEFIKAITAVYNGDKY 126 Query: 131 FTQKLASYLITH--SGNYRYNSTESAL------LTHREKEILNKLRIGASNNEIARSLFI 182 F ++S L++ S + +S +S LT REK IL + G +N EIA L I Sbjct: 127 FNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNNREIADGLGI 186 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 S T++TH N+ KK+ VKN + V A D Sbjct: 187 SIRTIETHRANIMKKLKVKNAVELVRIAID 216 >UniRef50_A5GK60 Possible two component system response regulator n=5 Tax=Synechococcus RepID=A5GK60_SYNPW Length = 227 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 10/78 (12%) Query: 140 ITHSGNYRYNSTESAL----------LTHREKEILNKLRIGASNNEIARSLFISENTVKT 189 I GNY ++A L+ RE E+L L G +N EIA +LF+S TVKT Sbjct: 142 IAEGGNYYPKDVQTAAGYEDIEILPELSDREMEVLKVLSCGMTNKEIAVTLFVSAETVKT 201 Query: 190 HLYNLFKKIAVKNRTQAV 207 H+ ++ K+ VK+RTQAV Sbjct: 202 HVSSIIGKMGVKDRTQAV 219 >UniRef50_C8UTK6 Two-component response regulator n=39 Tax=Bacilli RepID=C8UTK6_LACRG Length = 203 Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 9/131 (6%) Query: 83 KILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITH 142 K+++L T Y +NG + ++ ++ V+ G+ + +L + ++T Sbjct: 78 KVIILTTFAQKVYFQRAIAAQVNGYLLKDSPSDDLIAVIRKVMTGQTVYAPELVANMVT- 136 Query: 143 SGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKN 202 ES LT RE +L ++ G S+ +IA SLF+SE TV+ +L +F K+ V N Sbjct: 137 --------AESNPLTERELAVLGEVASGLSSKQIAASLFLSEGTVRNYLSAIFSKLGVHN 188 Query: 203 RTQAVSWANDN 213 R +A+ A N Sbjct: 189 RIEAIEMAKRN 199 >UniRef50_Q21KE6 Transcriptional regulator, XRE family n=2 Tax=Proteobacteria RepID=Q21KE6_SACD2 Length = 227 Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 15/120 (12%) Query: 106 GVFYSMEDQERVVNGLQGVLRGECYFTQKLASYL-----------ITHSGNYRYNSTESA 154 G + +++ ++ VL G Y Q++ S L ITH+ + + A Sbjct: 100 GFITKTSPSDVMISAIKLVLSGGVYIPQEMISALNMPFTAHSSDGITHAASPAPQTAPPA 159 Query: 155 L----LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 LT R+ +L+++ G SN EIAR L +S +TVK H+ + ++ VKNRTQAV+ A Sbjct: 160 TGDHQLTERQLHVLHEMLKGLSNKEIARELNMSPSTVKVHVAAILREFNVKNRTQAVAHA 219 >UniRef50_C4DRR3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DRR3_9ACTO Length = 143 Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 27/62 (43%), Positives = 40/62 (64%) Query: 147 RYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQA 206 R + + LT RE+E+L + G SN EI R LF++E+T+KTH LF+K+ ++R A Sbjct: 73 RPKPSGTLTLTDREREVLGGMAEGKSNAEIGRELFVTEDTIKTHARRLFRKLDARDRAHA 132 Query: 207 VS 208 VS Sbjct: 133 VS 134 >UniRef50_A6W5Y9 Two component transcriptional regulator, LuxR family n=21 Tax=Actinomycetales RepID=A6W5Y9_KINRD Length = 204 Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 27/56 (48%), Positives = 39/56 (69%) Query: 153 SALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVS 208 + +LT RE+++L + G SN EI R LF+SE+TVKTH LF+K+ +R QAV+ Sbjct: 140 APVLTEREQQVLVGMSRGRSNAEIGRELFLSEDTVKTHARRLFRKLEAADRAQAVA 195 >UniRef50_Q7UVB4 Nitrate/nitrite regulatory protein narP n=1 Tax=Rhodopirellula baltica RepID=Q7UVB4_RHOBA Length = 210 Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 51/95 (53%) Query: 116 RVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNE 175 R++ L G+ +T++ + R N LT RE E+L ++ +G +N E Sbjct: 110 RLIEALNLAFDGQQSWTREELRRVTGALATPRMNQDIDVPLTQRESEVLRQMALGLTNKE 169 Query: 176 IARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 IA+ L IS TVK H+ ++ +K+ V +RTQA WA Sbjct: 170 IAKMLGISYETVKEHVQHILRKLGVSDRTQAAVWA 204 >UniRef50_Q1AUM8 Two component transcriptional regulator, LuxR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AUM8_RUBXD Length = 208 Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 21/170 (12%) Query: 57 LLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYP---YRDIENWPHINGVFYSME- 112 L+D+++ D + IHY + S +I + ED R E P + V + + Sbjct: 29 LIDILDPDAR-IHYAESAPSGDRPDIVLFCAGGAEDVGEAVRRLQEQAPGASVVVFGLSS 87 Query: 113 DQERVVNGLQGVLRGECYF----TQKLASYLITHSGNYRY------------NSTESALL 156 D GLQ +G + +Q + + + SG + + L Sbjct: 88 DLNLARAGLQAGAKGFVHAGMEPSQVVRALTVAASGEVAVPRDLLKDLVAGREPVDLSGL 147 Query: 157 THREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQA 206 THR++EIL + G +N +I R LF+SE+TVK HL +K + V+NRT+A Sbjct: 148 THRQQEILKLVAEGQTNAQIGRRLFLSESTVKQHLRAAYKVLKVRNRTEA 197 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 13/140 (9%) Query: 78 KNNNIKILLLNTPEDYPYRDIEN--WPHI--NGVFYSMEDQER--VVNGLQGVLRGECYF 131 + +++L+L T Y D E+ P I Y ++D R ++ ++ G+ Sbjct: 82 EQPAVRVLVLTT-----Y-DTESDVLPAIEAGATGYLLKDAPREDLIRAVRAAAAGQPVL 135 Query: 132 TQKLASYLITHSGNYRYNSTESA-LLTHREKEILNKLRIGASNNEIARSLFISENTVKTH 190 +A L+T LT RE E+L + G +N E AR LFISE TVKTH Sbjct: 136 APTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKLFISEATVKTH 195 Query: 191 LYNLFKKIAVKNRTQAVSWA 210 L + + K V++R AV+ A Sbjct: 196 LLHAYAKFGVRDRAAAVAEA 215 >UniRef50_Q11XC0 Fimbrial Z protein; probable signal transducer n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11XC0_CYTH3 Length = 212 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 3/100 (3%) Query: 114 QERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASN 173 +E +++ +Q V + Y+ + L+ + N T ++ + RE E+L + G SN Sbjct: 110 KEELLHAVQQVYTNKEYYVSDVTQVLLK---GFLANQTSDSIFSDRELEVLRYICKGRSN 166 Query: 174 NEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 +IA LFISE T+ TH N+ KK VK T+ + WA DN Sbjct: 167 EQIADILFISEKTIATHRRNIMKKAGVKKSTELIVWALDN 206 >UniRef50_A3VVX9 DNA-binding response regulator, LuxR family protein n=1 Tax=Roseovarius sp. 217 RepID=A3VVX9_9RHOB Length = 202 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 48/158 (30%), Positives = 67/158 (42%), Gaps = 9/158 (5%) Query: 55 IILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQ 114 +++LD+M + SR + IL + R + +W G D Sbjct: 50 LVMLDLMMPGMDSLSGLAVMKSRAGCPVAILSGTGTPEVARRALRSW--AAGFLPKTLDP 107 Query: 115 ERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNN 174 + +V + +L GE Y SG+ LT RE ++L + G SN Sbjct: 108 QSLVAAVHHMLLGETY-----TPLDFLESGDTEAEG--KVHLTPRETDVLVGVLDGKSNK 160 Query: 175 EIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 EIAR L I E TVK HL L +K+ KNRTQA A D Sbjct: 161 EIARDLDIQEVTVKLHLKTLSRKLGAKNRTQAAMIARD 198 >UniRef50_A4SWC0 Two component transcriptional regulator, LuxR family n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 RepID=A4SWC0_POLSQ Length = 197 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 38/67 (56%), Positives = 43/67 (64%), Gaps = 2/67 (2%) Query: 149 NSTESAL--LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQA 206 N E+ L LT R+KEIL + G SN IA SL ISE TVK HL +FKKI V NRTQA Sbjct: 128 NPDEAELTQLTDRQKEILAHISNGDSNKMIAYSLNISEQTVKVHLGEIFKKIKVFNRTQA 187 Query: 207 VSWANDN 213 V A +N Sbjct: 188 VIKAKEN 194 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 20/165 (12%) Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 +EA ++LI + DT K+++L+ +D Y G D + ++ Sbjct: 98 VEATRQLIEAYPDT--------KVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEA 149 Query: 121 LQGVLRGECYFTQKLA-------SYLITHSGNYRYNSTESA-----LLTHREKEILNKLR 168 ++ V G Y K+ L+ G + + LLT RE E+L L Sbjct: 150 VRVVAEGGSYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLA 209 Query: 169 IGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 G SN IA +L+ISE TVK H+ N+ +K+ V +RTQAV A N Sbjct: 210 DGKSNKGIADALYISEKTVKNHVSNILQKLNVNDRTQAVVVAIKN 254 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 26/57 (45%), Positives = 40/57 (70%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 LT RE+++L + G SN IAR +F+SENTVK H+ N+F+K+ + NR +A +A + Sbjct: 151 LTQRERDVLRYVAGGISNKMIARRMFLSENTVKAHMQNIFRKLNIDNRVRAAVYARE 207 >UniRef50_A9WVF8 Two component response regulator n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WVF8_RENSM Length = 225 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 3/103 (2%) Query: 114 QERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASN 173 ++R++ ++ G+ F +A LI+ + + E LT RE EIL + G +N Sbjct: 126 RDRILAAIRSTASGQATFDVAVARRLISGLKPSKPSFPE---LTERESEILALIAAGRNN 182 Query: 174 NEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR 216 EIA+ F+S TVKTH+ N+F K+ +++R QA++ N R Sbjct: 183 QEIAQESFVSVATVKTHINNIFAKLQLRDRAQAITLWNSRAGR 225 >UniRef50_A9B845 Transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B845_HERA2 Length = 461 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 27/56 (48%), Positives = 41/56 (73%) Query: 151 TESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQA 206 ++ + L+ RE E+L +L +GASNNEIA +L IS NTVK H+ N++ K+ V +R +A Sbjct: 2 SDQSPLSEREIEVLRQLALGASNNEIANTLVISPNTVKVHIRNIYAKLGVLSRAEA 57 >UniRef50_A1ARF4 Transcriptional regulator, LuxR family n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ARF4_PELPD Length = 201 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 1/105 (0%) Query: 104 INGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEI 163 ++G+ + D ++ + +G+ + L+T + N R TE L +++E+E+ Sbjct: 87 VDGIMTTDADIPLLMKAFHAIAQGQIWIDNCKIRALVTFAENNRDCVTEGNL-SNKEREV 145 Query: 164 LNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVS 208 + + G +N EIA L+ISE TVKTH+ N+FKK + RTQ V Sbjct: 146 VISVSQGLTNREIAARLYISEQTVKTHINNIFKKTNMARRTQLVP 190 >UniRef50_A4TWP7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TWP7_9PROT Length = 213 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 3/100 (3%) Query: 117 VVNGLQGVLRGECYFTQKL---ASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASN 173 +V+ LQ VL GE + L A+ I+ + + + LT RE++IL+ LR G N Sbjct: 111 MVSALQLVLSGERFIPSMLMDSANNQISGASDRSPSGDLLGRLTPRERDILHLLREGLPN 170 Query: 174 NEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 IA L + E TVK+HL N+F+K+ V+NR QA+ D Sbjct: 171 KVIAARLDVREVTVKSHLGNMFRKLGVQNRLQAMRMLVDT 210 >UniRef50_B9JKP6 Two-component response regulator protein n=2 Tax=Agrobacterium RepID=B9JKP6_AGRRK Length = 217 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 8/134 (5%) Query: 81 NIKILLLNTPEDYPYRDIENWPHINGVFYSMED--QERVVNGLQGVLRGECYFTQKLASY 138 + KI++L E Y + + Y ++D +E ++ + VL G+ +F L Sbjct: 77 DTKIVMLTMHESIDY--LSAAIKVGASGYLLKDVSRESLLRTIDIVLDGQAFFDADLMCK 134 Query: 139 LITHSGNYRYNSTESAL--LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFK 196 ++ R + E + LT+RE+EIL L G +N IAR+L IS TVK H+ + Sbjct: 135 MLARID--RESPAEMVIERLTNREREILCSLTTGETNKGIARALSISPGTVKVHVERILS 192 Query: 197 KIAVKNRTQAVSWA 210 K+ V +RTQA A Sbjct: 193 KLGVNDRTQAAVLA 206 >UniRef50_A8UHM3 Two-component response regulator n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UHM3_9FLAO Length = 217 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 6/171 (3%) Query: 45 RSLDDISSGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPED--YPYRDIENWP 102 + LDD+S ++LLD+ D I + L +K ++KI+ L + +D + R ++N Sbjct: 48 KGLDDLSV-EVLLLDINLPDTNGIDLSKQLL-KKFPDLKIIALTSHDDASFAKRMLKNGV 105 Query: 103 HINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKE 162 H G D+ ++ L+ VL GE Y + ++ L+ + + + LT RE E Sbjct: 106 H--GYLLKNTDKIELLRALKTVLSGEIYLQKDMSDRLLYQRSKPKAKNGLNIKLTRREHE 163 Query: 163 ILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 +L + + +I+ LFIS TV+TH N+ K KN + A +N Sbjct: 164 VLIAISEELTTQQISEKLFISPKTVETHRSNIILKFGAKNSVGIIKMAIEN 214 >UniRef50_D1BX47 Two component transcriptional regulator, LuxR family n=14 Tax=Actinomycetales RepID=D1BX47_XYLCX Length = 234 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 6/85 (7%) Query: 132 TQKLASYLITHSGNYRYNSTES------ALLTHREKEILNKLRIGASNNEIARSLFISEN 185 T++L +L+T ++ S A LT RE+E+L + G SN EIA LF++E Sbjct: 140 TRRLLEHLVTALPTPAPDTPPSPAHAALATLTDREREVLELMARGRSNTEIAADLFVAEA 199 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWA 210 TVKTH+ + K+ ++R QAV A Sbjct: 200 TVKTHVGRILAKLDARDRVQAVVLA 224 >UniRef50_A0QPA5 Transcriptional regulator, LuxR family protein n=2 Tax=Mycobacterium RepID=A0QPA5_MYCS2 Length = 395 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 27/55 (49%), Positives = 38/55 (69%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 LT RE E+L + GASN+EIA L I+E TVK+H+ ++ +K NR QA++WA Sbjct: 337 LTERESEVLRLMVTGASNHEIAEQLVITEGTVKSHVKHILRKYGAVNRAQAIAWA 391 >UniRef50_A1RC88 Two-component system response regulator n=8 Tax=Actinomycetales RepID=A1RC88_ARTAT Length = 218 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 6/85 (7%) Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 G+ ++A+ L+ G R S L+ RE ++L L G SN +A+ LFISE T Sbjct: 132 GQTALAPEVAARLM---GRIRNPSPA---LSGREVQLLELLATGMSNRAMAKQLFISEAT 185 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWAN 211 VKTHL +++ K+ V NRT A++ A Sbjct: 186 VKTHLVHIYSKLGVDNRTAAIAVAT 210 >UniRef50_C8NX57 Two component system response regulator n=1 Tax=Corynebacterium genitalium ATCC 33030 RepID=C8NX57_9CORY Length = 222 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 8/136 (5%) Query: 83 KILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLI-- 140 K+++L T D ++G D + + + ++ V RGE + ++ Sbjct: 80 KVIMLTTFNDDELVQAAITAGVHGFLLKDADPDVLADAVRAVDRGESVLASGVTGAVLEW 139 Query: 141 THSGNYRYNSTES------ALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNL 194 G + N+ ++LT RE E+L ++ GA+N EI++ LFI+ TVKTH+ NL Sbjct: 140 VRGGVDKRNALSDYERQALSMLTAREVEVLAEIAAGATNAEISQRLFIAPTTVKTHVKNL 199 Query: 195 FKKIAVKNRTQAVSWA 210 K+ ++R V A Sbjct: 200 LVKLGARDRVALVLLA 215 >UniRef50_C5RKV5 ATP-dependent transcriptional regulator, MalT-like, LuxR family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RKV5_CLOCL Length = 895 Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 32/63 (50%), Positives = 43/63 (68%) Query: 150 STESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSW 209 + E LL+ RE EIL L GA+N+EIA F+S NTVKTHL N++ K+ V +RT+AV Sbjct: 829 AVEDELLSKREIEILQSLEQGATNSEIAEKSFVSINTVKTHLLNIYTKLDVHSRTRAVVK 888 Query: 210 AND 212 A + Sbjct: 889 AKE 891 >UniRef50_D1B9T1 Two component transcriptional regulator, LuxR family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9T1_THEAS Length = 227 Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 54/94 (57%) Query: 117 VVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEI 176 +++ ++ V RG Y K+A L++ R + LT RE E+L + G +N EI Sbjct: 113 LLSAIRSVYRGHSYVDPKVAGKLLSTFNRRREERDLLSRLTPREMEVLYWISQGLNNGEI 172 Query: 177 ARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 AR + +SE TVK H+ ++ KK+ + +RTQA +A Sbjct: 173 ARKMVLSEKTVKNHVSHILKKLDLVDRTQAAVFA 206 >UniRef50_C0GHS5 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHS5_9FIRM Length = 219 Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 55/93 (59%), Gaps = 1/93 (1%) Query: 117 VVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEI 176 V+ ++ V++GE + ++ +++ + S S L + RE+EIL+ + G +N EI Sbjct: 113 VIKAIKAVMQGESFIDPEITEQVMSLIRGEKAASQISGL-SKREEEILHLVGEGKTNKEI 171 Query: 177 ARSLFISENTVKTHLYNLFKKIAVKNRTQAVSW 209 R LF+SE TV+ H+ + K+ V NR+QA ++ Sbjct: 172 GRELFLSEKTVRNHVSRILDKLGVSNRSQAAAF 204 >UniRef50_A9U739 Predicted protein n=2 Tax=cellular organisms RepID=A9U739_PHYPA Length = 214 Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 53/94 (56%) Query: 120 GLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARS 179 G++ V G +Q++AS +I + + LT RE E+L+KL G N EIA + Sbjct: 116 GIRVVQAGGTLISQEMASKMIKNMNSATPAKHNEFGLTAREIEVLHKLAAGLRNQEIAEA 175 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 LF+SE TVK ++ ++ K+ VK R +A A D+ Sbjct: 176 LFLSEGTVKNYISTIYSKLNVKGRREATQKARDS 209 >UniRef50_Q0S3P7 Response regulator, two-component system n=11 Tax=Actinomycetales RepID=Q0S3P7_RHOSR Length = 228 Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 11/141 (7%) Query: 75 LSRKNNNIKILLLNT--PEDYPYRDIENWPHINGVFYSMEDQE--RVVNGLQGVLRGECY 130 LS + + +L+L T E R I H Y ++D + +V ++ V RGE Sbjct: 90 LSAADGTMGLLVLTTFLDEQLVVRAI----HAGARGYVVKDVDTTELVRAIRAVSRGESA 145 Query: 131 FTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTH 190 F + AS +I + +T LT RE E+L L G SN +I LFIS TVK H Sbjct: 146 FDSRSASAVIR---SLNGQTTPRDGLTERELEVLQLLAKGLSNAKIGERLFISATTVKFH 202 Query: 191 LYNLFKKIAVKNRTQAVSWAN 211 + N+ +K+ V R +AV A Sbjct: 203 VSNIMRKLDVGRRAEAVYEAG 223 >UniRef50_B1ZY58 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZY58_OPITP Length = 223 Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 8/92 (8%) Query: 115 ERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNN 174 E + + ++ V G+ + +A L + + LT RE+++L L G SN Sbjct: 127 EEIASTVRAVYAGDTSLPRSVAERLTERAQREQ--------LTERERDVLESLIKGRSNK 178 Query: 175 EIARSLFISENTVKTHLYNLFKKIAVKNRTQA 206 EIA SL ISE+TVK+HL LF K+ V++RT A Sbjct: 179 EIASSLCISEDTVKSHLKTLFAKLRVRDRTGA 210 >UniRef50_B4D831 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B4D831_9BACT Length = 209 Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 8/92 (8%) Query: 115 ERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNN 174 E V+ ++ V+ GE YF +AS L + T AL T RE ++L+ + G SN Sbjct: 112 EEVLEAIRCVVGGETYFPAPIASKLAS-------RRTRDAL-TPREHQVLHHIVAGLSNK 163 Query: 175 EIARSLFISENTVKTHLYNLFKKIAVKNRTQA 206 EIA +L +SE TVK H+ N K+ V +RTQA Sbjct: 164 EIAAALHMSEATVKLHISNTLAKLHVADRTQA 195 >UniRef50_B2A6W2 Two component transcriptional regulator, LuxR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W2_NATTJ Length = 215 Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 50/204 (24%), Positives = 98/204 (48%), Gaps = 22/204 (10%) Query: 22 QATALLQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKK---LIHYWQDTLS 76 + ++L + + + + G++ + +LD ++LLD+ DK+ +I +++ S Sbjct: 16 KGLSMLLNSQDDMEVCGQVGTAKEALDTCKEKCPDVVLLDLSLPDKQGHEIIKELKESCS 75 Query: 77 RKNNNIKILLLNTPEDYPY--RDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQK 134 + +L L ED Y R +E +G + +++ ++ V +GE + Sbjct: 76 AR-----VLALTMHEDEAYFKRVVEAGG--DGYILKKAADDELISAIRSVYQGEVIVDKT 128 Query: 135 LASYLITHSGNYRYNSTESAL-----LTHREKEILNKLRIGASNNEIARSLFISENTVKT 189 LI + YR +S L+ REKE+L + +G +N EIA L+IS TV+T Sbjct: 129 FTKLLIDY---YRNPDKQSGTEKNYDLSDREKEVLQLIALGYTNKEIAEKLYISIKTVET 185 Query: 190 HLYNLFKKIAVKNRTQAVSWANDN 213 H+ + +K+ + R++ V +A N Sbjct: 186 HIARIKEKLGLNRRSELVRYAMRN 209 >UniRef50_B8EIF2 Two component transcriptional regulator, LuxR family n=1 Tax=Methylocella silvestris BL2 RepID=B8EIF2_METSB Length = 209 Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 10/98 (10%) Query: 110 SMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRI 169 SMED + L+ VL G Y + + E+ LT R+ +L L Sbjct: 109 SMED---LAAALKQVLDGGVYIPG-------SDEAREKRGPAEADALTPRQLAVLGLLSA 158 Query: 170 GASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAV 207 G SN EIAR+L IS+ TVK H+ +F+K+ V RTQA+ Sbjct: 159 GKSNKEIARALSISDLTVKVHITTIFRKLGVATRTQAI 196 >UniRef50_Q1ZGB3 Nitrate/nitrite response regulator protein NarP n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGB3_9GAMM Length = 211 Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 5/104 (4%) Query: 105 NGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYL--ITHSGNYRYNSTESALLTHREKE 162 NG F D +++ + VL GE + L YL + N R LT RE++ Sbjct: 102 NGYFLKDSDASLLLSNINKVLAGELVLSDDLIKYLNDLDEEDNIREKLNN---LTKRERQ 158 Query: 163 ILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQA 206 IL ++ G SN EI+ +L ISE TVK H+ +L KK+ K+R +A Sbjct: 159 ILQEIAKGQSNKEISINLHISEGTVKVHVKSLLKKLQAKSRVEA 202 >UniRef50_P54794 Monoamine regulon transcriptional regulator n=50 Tax=Enterobacteriaceae RepID=MOAR_KLEAE Length = 227 Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 32/56 (57%), Positives = 40/56 (71%) Query: 153 SALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVS 208 A+LT +E+EI+ +R GASN IAR L IS +TVKTHL N+F K V NRT+ VS Sbjct: 159 PAILTAKEREIVGMVREGASNKLIARQLDISLSTVKTHLRNIFAKTEVVNRTELVS 214 >UniRef50_D2RAN9 Response regulator receiver domain protein n=17 Tax=Actinobacteridae RepID=D2RAN9_GARVA Length = 261 Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 6/88 (6%) Query: 128 ECYFTQKLASYLITHSGNYRYNSTESAL--LTHREKEILNKLRIGASNNEIARSLFISEN 185 E Y Q + T S Y T SA+ LT RE+E+L ++ G SN EIA LFIS Sbjct: 173 ESYDVQANPAAQATQSCAY----TNSAITELTDREREVLVEIAHGLSNQEIADKLFISLP 228 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWANDN 213 TVKTH+ ++ KI ++R QAV +A +N Sbjct: 229 TVKTHVAHILGKIGARDRVQAVVFAYEN 256 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 15/144 (10%) Query: 75 LSRKNNNIKILLLNT--PEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFT 132 L R+ + ++L+ T E+ YR ++ G +E +++ ++ V GE + + Sbjct: 74 LRREWPDARVLMFTTFDGEEDIYRAMQAG--ARGYLLKSAAREELLSAIRAVAAGERHLS 131 Query: 133 QKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLY 192 LA L + ++ RE+E+L + G +N EIA +L ISE TVK H Sbjct: 132 AALAQRL--------AGRVAAPDVSDREREVLQLIARGKANKEIAAALGISEETVKRHAS 183 Query: 193 NLFKKIAVKNRTQAVSWANDNLRR 216 NLF K+ V +R QA S + +RR Sbjct: 184 NLFVKMGVADRAQATS---EGIRR 204 >UniRef50_A6GST5 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Limnobacter sp. MED105 RepID=A6GST5_9BURK Length = 223 Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 28/53 (52%), Positives = 40/53 (75%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVS 208 LTH+++++++ L G SN EIAR L +S T+KTHL +F ++ VKNRTQAVS Sbjct: 157 LTHKQQQVMHFLASGLSNKEIARKLDLSPETIKTHLREIFTRMNVKNRTQAVS 209 >UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QGZ7_9SPHI Length = 218 Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 83/167 (49%), Gaps = 11/167 (6%) Query: 55 IILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNT--PEDYPYRDIENWPHINGVFYSME 112 +IL+D+ I Q +SR N+++L+L+ EDY R +E + G Sbjct: 52 LILMDISLPGMSGIQTTQ-VISRLYKNVRVLMLSMHNNEDYILRSVEAGAY--GYILKDS 108 Query: 113 DQERVVNGLQGVLRGECYFTQKLASYLIT------HSGNYRYNSTESALLTHREKEILNK 166 + ++ ++ + GE Y++ +AS +++ G+ + + L+++EKEIL Sbjct: 109 SSDEMIKAIRTIASGEKYYSSPVASIILSGYMQQLKKGDRHGRAERQSKLSNKEKEILQF 168 Query: 167 LRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 L G S+ EIA L +S TV H N+ +++ V+N + V A ++ Sbjct: 169 LVDGMSSREIAEKLQLSVRTVDNHRANMMRRLQVRNAAELVRMAVED 215 >UniRef50_UPI0001C3195F two component transcriptional regulator, LuxR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3195F Length = 215 Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 4/118 (3%) Query: 97 DIENWPHINGVFYSMEDQ--ERVVNGLQGVLRGECYFTQKLASYLITH--SGNYRYNSTE 152 D+ + G Y ++D E +V G+ V G+ + ++A+ ++ + + + Sbjct: 92 DLTDAVLAGGCGYLLKDAPIETIVAGVTAVAAGDAVLSPRVAATMLARMRASGRQTAARA 151 Query: 153 SALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 A L+ RE+E+L + G N IA+ LFIS +TVK H+ ++ K+ V NR QA A Sbjct: 152 RAQLSPREQEVLRLVAGGMDNAAIAQELFISPHTVKNHISSILTKLHVANRIQAAVRA 209 >UniRef50_B9JNF6 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JNF6_AGRRK Length = 275 Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 29/55 (52%), Positives = 38/55 (69%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 L+ REK IL + G SN +IAR L I+E+TVK H+ + +KI V+NRTQA WA Sbjct: 208 LSPREKSILKLVMGGESNKQIARRLEITESTVKVHIKTILRKIDVRNRTQAAIWA 262 >UniRef50_C5VFN2 Two component transcriptional regulator, LuxR family n=2 Tax=Corynebacterium matruchotii RepID=C5VFN2_9CORY Length = 216 Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 15/184 (8%) Query: 31 KQSLAITGKLHNIQRSLDDISSGSI--ILLDMMEADKKLIHYWQDTLSRKNNNIKILLL- 87 + L + +H+ Q ++D ++ + IL+D+ + + + K N KI++L Sbjct: 25 QPDLEVVATVHDGQAAVDTVAHTPVDLILMDVRMPKLDGVAALKK-IRAKPNPPKIVMLT 83 Query: 88 --NTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGN 145 N P+ NG D E ++ ++ V G+ + +++ + Sbjct: 84 TFNVPDTVKAALTAGA---NGFLLKDADPETLIESVRTVAAGQTVLAADVVGHILPGALT 140 Query: 146 YRYNSTES------ALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIA 199 ++ S +LLT RE E+L+ + G +N EIA L IS TVKTH+ NL K+ Sbjct: 141 VAADTLPSHVQQGLSLLTPREMEVLHAIGEGKTNAEIAAELVISATTVKTHVSNLLAKVH 200 Query: 200 VKNR 203 ++R Sbjct: 201 ARDR 204 >UniRef50_Q5P3L2 Nitrate/nitrite TWO-component response regulator NARL n=16 Tax=Proteobacteria RepID=Q5P3L2_AZOSE Length = 220 Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 3/113 (2%) Query: 105 NGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHS--GNYRYNSTESALLTHREKE 162 +G + E++V LQ G + L ++L+ + R +S A LT +E+ Sbjct: 106 DGYLLKDMEPEQMVEALQAAAAGRIVVSDAL-THLMAAALRQEKRPDSVTDAGLTEQEQR 164 Query: 163 ILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLR 215 IL ++ G SN IAR L I+E TVK H+ ++ +K+ ++R +A WA N R Sbjct: 165 ILERIAAGLSNKLIARELGIAEGTVKVHVKHVLRKLNFRSRVEAAVWAVANQR 217 >UniRef50_C6BJ98 Two component transcriptional regulator, LuxR family n=2 Tax=Ralstonia pickettii RepID=C6BJ98_RALP1 Length = 219 Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 9/109 (8%) Query: 106 GVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESAL-----LTHRE 160 GV + ++ LQ + G Y Y + R+ ES LT R+ Sbjct: 99 GVVDRQATADVLLEALQRITSGAVYLPPISNLY----PDDPRHTPGESPAEIWRRLTPRQ 154 Query: 161 KEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSW 209 E+L L G SN +I R L ++E T+K HLY LF++I V NRT+A W Sbjct: 155 HEVLQLLAEGKSNKQICRVLNVAEGTIKNHLYALFRQIGVNNRTEAALW 203 >UniRef50_A1VHR5 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfovibrio vulgaris RepID=A1VHR5_DESVV Length = 215 Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 6/133 (4%) Query: 81 NIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLI 140 ++IL+ + ED D NG ED ++ G++GVLRGE + +++ S L Sbjct: 83 GVRILVYSMHEDPGTIDRALRCGANGYVTKREDPSVLLEGIEGVLRGERFVSERAGSSLD 142 Query: 141 THSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAV 200 +G + LL+ +E+ I + + G SN ++A SL IS TV+T+L + K+ + Sbjct: 143 ETAGARAMDPL--FLLSDQERAIFSAVGRGESNMDVAGSLGISPRTVETYLARMVNKLGL 200 Query: 201 KN----RTQAVSW 209 N R A++W Sbjct: 201 SNVRTLRKFAINW 213 >UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphylococcaceae RepID=B9E7V9_MACCJ Length = 210 Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 88/173 (50%), Gaps = 23/173 (13%) Query: 47 LDDISSGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHING 106 LD+ +I++D++ + I + + K ++K+L+L++ + D E H+ G Sbjct: 45 LDETQLPDLIIMDLVMPELNGIEATR-RIKAKYPDVKVLVLSS-----FIDEE---HVLG 95 Query: 107 VF------YSMEDQER--VVNGLQGVLRGECYFTQKLASYLITHSG-NYRYNSTESALLT 157 V Y M+D E ++N ++ + GE F + + SG N + L+ Sbjct: 96 VMDAGADGYEMKDSEPKALINTIKQIAAGEQIFHPDVMK--VRKSGMNLAHLRNP---LS 150 Query: 158 HREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 RE E+L + G +N EIA LF+SE TVKTH+ ++F K+ V +RTQA + Sbjct: 151 KRELEVLKAMSEGLTNKEIAEKLFVSEKTVKTHVSHIFAKLEVGDRTQASMYG 203 >UniRef50_UPI0001AF0F26 two-component system response regulator n=2 Tax=Streptomyces filamentosus RepID=UPI0001AF0F26 Length = 234 Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 3/102 (2%) Query: 117 VVNGLQGVLRGECYFTQKLASYLITHSGN--YRYNSTESALLTHREKEILNKLRIGASNN 174 ++ G++ + G ++++ L +G + + LLT RE+E+L L G SN Sbjct: 114 LIPGVRLLAAGGSALSERVVRSLPDGAGKEAAPADPPGARLLTAREREVLELLPSGMSNE 173 Query: 175 EIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR 216 EI R LF+S TV+ H+ +L K+ NR QA A+ +RR Sbjct: 174 EIGRRLFLSRTTVRDHVSSLLAKLGAANRVQAAVIAS-GMRR 214 >UniRef50_Q0AL13 Two component transcriptional regulator, LuxR family n=1 Tax=Maricaulis maris MCS10 RepID=Q0AL13_MARMM Length = 201 Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 80/178 (44%), Gaps = 27/178 (15%) Query: 41 HNIQRSLDDISSGSIILLDMMEADKKLIHYWQDTLSR-KNNNIKILLLNTPEDYPYRDIE 99 + ++RSL D + ++LLD+ + +D + R + + IL Sbjct: 36 NEVERSLSDGNRYDLVLLDLRMPGIAGVQDVRDLMKRHADQPVAIL-------------- 81 Query: 100 NWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNY-------RYNSTE 152 +G+ ME Q + NG +G + +A+ + +G E Sbjct: 82 -----SGMASPMEVQMLLENGARGFIPKTMPADGLVAAVRLILAGQVFSPIHHTTDPENE 136 Query: 153 SALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 A LT RE+E+L L+ G +N EIARSL I E TVK HL +L K+ +NRT+ V A Sbjct: 137 PASLTPREREVLFCLQRGEANKEIARSLEIQETTVKLHLRSLSLKLDARNRTEVVVKA 194 >UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY5_SYMTH Length = 218 Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 81/160 (50%), Gaps = 17/160 (10%) Query: 57 LLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPE---DYPYRDIENWPHINGVFYSMED 113 +LD +EA +KL + D +K+++L E D + I+ +G Sbjct: 57 VLDGVEATRKLKQMYPD--------LKVVILTVSEIDKDL-FEAIKAG--ADGYLLKNLG 105 Query: 114 QERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNST---ESALLTHREKEILNKLRIG 170 E +V+ L+ + GE + +A+ ++ R N+T L+ RE E+L G Sbjct: 106 PEELVSSLRAAISGEAPISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTG 165 Query: 171 ASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 + EIA L+++E+TVK H+ ++ +K+ ++NR++AV +A Sbjct: 166 LTYKEIAAKLYVAESTVKNHMRHILEKLHLRNRSEAVGYA 205 >UniRef50_B9CLG1 Transcriptional regulator, LuxR family protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CLG1_9ACTN Length = 240 Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 27/60 (45%), Positives = 40/60 (66%) Query: 149 NSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVS 208 + T S+ LT RE E+ + + G SN +IA L++SE T+KTHL N+F K+ V+NR Q + Sbjct: 164 DQTISSQLTRRENEVASLVCCGMSNAQIASKLYVSEKTIKTHLSNIFSKLGVRNRVQLIC 223 >UniRef50_A5UQJ6 Response regulator receiver protein n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UQJ6_ROSS1 Length = 471 Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 30/58 (51%), Positives = 39/58 (67%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 L+ RE+EIL + GA+N +IA L IS NTVK HL N+F KI V +RT+A +A N Sbjct: 9 LSEREREILRLVATGATNQQIAAQLNISANTVKVHLRNIFGKIGVASRTEATMYAVRN 66 >UniRef50_A7NFQ1 Transcriptional regulator, LuxR family n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NFQ1_ROSCS Length = 454 Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 29/55 (52%), Positives = 38/55 (69%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 L+ RE+EIL + GA+N +IA L IS NTVK HL N+F KI V +RT+A +A Sbjct: 9 LSEREREILRLVATGATNQQIAAQLNISANTVKVHLRNIFGKIGVASRTEATMYA 63 >UniRef50_B1YYJ9 Transcriptional regulator, LuxR family n=4 Tax=Burkholderia ambifaria RepID=B1YYJ9_BURA4 Length = 227 Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 26/54 (48%), Positives = 37/54 (68%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSW 209 LT R++++L L G SN +I R L ++E T+K HLY LF++I V NRT+A W Sbjct: 152 LTPRQRDVLRLLAEGKSNKQICRVLNVAEGTIKNHLYALFRQIGVSNRTEAALW 205 >UniRef50_Q7NJN3 Gsr1799 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NJN3_GLOVI Length = 74 Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 2/67 (2%) Query: 147 RYNSTESAL--LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRT 204 R +AL LT RE+++ + GASN EIARSL+ISE TVK H+ + ++ V++RT Sbjct: 2 RSQPPPAALTALTPRERQVSGLIARGASNAEIARSLYISEGTVKFHITKILSRLGVRDRT 61 Query: 205 QAVSWAN 211 QA AN Sbjct: 62 QAAILAN 68 >UniRef50_C4DNP2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DNP2_9ACTO Length = 207 Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 25/53 (47%), Positives = 36/53 (67%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVS 208 LT RE ++L + G SN EI R LF+SE+T+KTH LF+K+ ++R AV+ Sbjct: 146 LTEREMQVLRGMSEGKSNAEIGRDLFVSEDTIKTHARRLFRKLGARDRAHAVA 198 >UniRef50_B5JFN7 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFN7_9BACT Length = 220 Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 18/205 (8%) Query: 21 LQATALLQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKLIHYWQDTLSRK 78 L+ L L SL I G+ HN Q +L+ I+L+D+ + ++ T + K Sbjct: 17 LEGLKTLLSLDDSLEIVGECHNGQEALEACRRLRPQIVLMDL---NMPVMDGVAATKAIK 73 Query: 79 NN--NIKILLLNTPEDYPYRDIENWPHINGVFYSMED--QERVVNGLQGVLRGECYFTQK 134 + +L L T +D R E Y ++D +++V ++ V GE + Sbjct: 74 QELPEVNVLTLTTFDDD-ERVFEAL-KAGSSGYLLKDTPSKQLVEAIRAVSSGESFLQPS 131 Query: 135 LASYLITH----SGNYRYNSTESAL---LTHREKEILNKLRIGASNNEIARSLFISENTV 187 +AS ++ SG L L+ RE+++L L G SN EIA L ++E TV Sbjct: 132 IASKVLAEFSRMSGPAAVKKAPVQLREPLSQREEQVLVWLSRGCSNKEIASHLDLAEGTV 191 Query: 188 KTHLYNLFKKIAVKNRTQAVSWAND 212 K H+ N+ K+ V +RTQA A D Sbjct: 192 KNHVSNVLGKLGVLDRTQAALMARD 216 >UniRef50_Q2W650 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W650_MAGSA Length = 213 Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 3/91 (3%) Query: 120 GLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARS 179 GL G G Y + A+ L + + + +L T RE E+L + GASN EIAR Sbjct: 115 GLVGA--GGTYVPAEFAA-LPSKPAAPATPTLDPSLFTSREMEVLALIVAGASNKEIARQ 171 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 L + E T+K HL +F+K+ VKNR+ A A Sbjct: 172 LDLQEVTIKLHLTRIFQKLGVKNRSHAAVTA 202 >UniRef50_D1SAH8 Two component transcriptional regulator, LuxR family n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1SAH8_9ACTO Length = 272 Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 1/62 (1%) Query: 148 YNSTESAL-LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQA 206 S SA+ LT RE ++L + G SN EI R LF+SE+TVKTH LF+K+ ++R A Sbjct: 202 ARSPRSAIGLTERELQVLLGMAEGKSNAEIGRELFVSEDTVKTHARRLFRKLGARDRAHA 261 Query: 207 VS 208 V+ Sbjct: 262 VA 263 >UniRef50_A3D8B4 Transcriptional regulator, LuxR family n=21 Tax=Shewanella RepID=A3D8B4_SHEB5 Length = 249 Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 8/116 (6%) Query: 104 INGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITH-----SGNYRYNSTESALL-- 156 I G+ ++ + + ++ GL+ ++ E ++ + L S + GN S A+L Sbjct: 124 IRGLLFADQRLDLMLTGLRKMVAEELWYDRTLLSKVFRRVVQKLDGNNEMPSDSVAMLQM 183 Query: 157 -THREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAN 211 T RE+ I+ + GA N EIA L ISE+TVK H+ ++F+K +NR + + WA Sbjct: 184 LTSRERTIIQFVSSGARNKEIAHRLCISEHTVKAHISSIFRKTQSRNRVELLRWAQ 239 >UniRef50_C5C8Q1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Micrococcus luteus NCTC 2665 RepID=C5C8Q1_MICLC Length = 227 Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 21/160 (13%) Query: 57 LLDMMEADKKLIHYWQDTLSRKNNNIKILLLNT--PEDYPYRDIENWPHINGVFYSMEDQ 114 L+D +EA +++ +DT + I++L + T EDY + G + Sbjct: 62 LMDGVEATRRI----KDT----HPAIRVLAITTFTSEDYLVPALRAG--AGGYLLKDAEP 111 Query: 115 ERVVNGLQGVLRGECYFTQKLASYLITH---------SGNYRYNSTESALLTHREKEILN 165 ++ +Q V RGE + +A+ L+ + + S + + LT RE +L Sbjct: 112 PAILGAIQAVHRGESVLSPAVAAKLLASIERDRPTVGPTSVQPGSPDGSDLTERELGVLR 171 Query: 166 KLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQ 205 L G SN EIA +LF+SE+TVK +L + K+ V++R Q Sbjct: 172 LLARGQSNPEIAANLFVSESTVKANLTRIMAKLEVRDRVQ 211 >UniRef50_C1BB72 Putative LuxR family transcriptional regulator n=2 Tax=Rhodococcus RepID=C1BB72_RHOOB Length = 379 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%) Query: 154 ALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNR-TQAVSWAND 212 A+LT RE+EIL+ + GA+NN+IA++L ISE TVK+H+ ++ KK+ V R AV +++ Sbjct: 317 AVLTFREREILSHIATGATNNQIAQTLVISEGTVKSHVKHILKKLRVPTRAAAAVLYSHQ 376 Query: 213 NLR 215 N R Sbjct: 377 NRR 379 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 51/160 (31%), Positives = 76/160 (47%), Gaps = 10/160 (6%) Query: 55 IILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNT--PEDYPYRDIENWPHINGVFYSME 112 +IL+D+M I + L + N+KI++L + +D Y IE V Y ++ Sbjct: 59 VILMDLMMPGMDGIETTRQ-LIVEYPNLKIIMLTSFLEDDKVYGAIEA----GAVSYVLK 113 Query: 113 --DQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIG 170 E ++ L G ++G T ++ L T R + LT REKE+L + G Sbjct: 114 TVSAEELIYALHGAVKGMPVMTADVSQAL-TRGLRQRTAQSGDEELTEREKEVLLLIAEG 172 Query: 171 ASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 SN EI L IS TVKTH+ NL K +++RTQ A Sbjct: 173 RSNKEIGEELHISVKTVKTHVSNLLMKCELEDRTQLAVLA 212 >UniRef50_B8G436 Transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8G436_CHLAD Length = 508 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/60 (48%), Positives = 42/60 (70%) Query: 151 TESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 T + ++ RE+EIL + GA+N +IA +L IS NTVK HL N+F KI V++RT+A +A Sbjct: 2 TNESPISEREREILRLVATGATNQQIAVALNISVNTVKVHLRNIFAKIGVESRTEATVYA 61 >UniRef50_C3JUJ7 Transcriptional regulatory protein DegU n=2 Tax=Rhodococcus erythropolis RepID=C3JUJ7_RHOER Length = 217 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/56 (50%), Positives = 38/56 (67%) Query: 151 TESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQA 206 T A LT RE+E+L L GA+N+ IA L++ E+TVKTH+ +LF K+ V NR A Sbjct: 151 TPLASLTEREREVLTILATGAANSVIAERLYLGESTVKTHISSLFAKLGVPNRVSA 206 >UniRef50_UPI0001789C57 two component transcriptional regulator, LuxR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C57 Length = 225 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/141 (32%), Positives = 69/141 (48%), Gaps = 13/141 (9%) Query: 81 NIKILLLNT--PEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYF---TQKL 135 N K++LL T E Y + I +G + + +++G++ + RG F T K Sbjct: 80 NTKVVLLTTFDVEQYVFDGIRAGA--SGYLLKDTETDELLSGIRAMHRGATLFNSSTAKR 137 Query: 136 ASYLITHSGNYRYNSTESA------LLTHREKEILNKLRIGASNNEIARSLFISENTVKT 189 A I SG +S LT RE E+L L G N+EI+ L ISE T KT Sbjct: 138 ALDQILTSGMQEPDSDSPGKDRLLGALTERETEVLQLLAYGKRNHEISAILCISEGTTKT 197 Query: 190 HLYNLFKKIAVKNRTQAVSWA 210 H++++ +K+ +RTQAV A Sbjct: 198 HIHHIMQKLGALDRTQAVVTA 218 >UniRef50_B8IGA6 Two component transcriptional regulator, LuxR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IGA6_METNO Length = 270 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/58 (50%), Positives = 38/58 (65%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 L+ RE+ IL L G+SN IAR L ++E TVK H+ ++ +KI V NRTQA WA N Sbjct: 184 LSERERLILTMLASGSSNKVIARRLDVTEATVKVHVKSILRKIRVSNRTQAAIWATKN 241 >UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFU2_9SPHI Length = 219 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 1/134 (0%) Query: 81 NIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLI 140 NIK+L+L + Y +G +VN ++ + GE YF++ + LI Sbjct: 82 NIKVLILTMHNNESYIKEIIAAGASGYILKNRGASELVNAIRTIYAGEEYFSKAVTDTLI 141 Query: 141 TH-SGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIA 199 + + LT REKE+L + G + EI++ LFI++ TV+TH NL K+ Sbjct: 142 KSIQESKKAKPNPQVKLTKREKEVLALIGKGMTTKEISKQLFIADTTVETHRRNLIDKLE 201 Query: 200 VKNRTQAVSWANDN 213 VKN + + + N Sbjct: 202 VKNSKELILYVAKN 215 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 7/102 (6%) Query: 115 ERVVNGLQGVLRGECYFTQKLASYLITH------SGNYRYNSTESALLTHREKEILNKLR 168 + V ++ V G+ + +AS L+ G+ R+ + LT RE E+L + Sbjct: 194 DEVAAAIRAVHGGQSLISPSMASKLLNEFASLIKRGDARHQ-VPAPKLTEREMEVLRLVA 252 Query: 169 IGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 G +N +IA+ LFISENTVK H+ N+ +K+ + +R +AV +A Sbjct: 253 KGLNNRDIAKQLFISENTVKNHVRNILEKLQLHSRMEAVVYA 294 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 51/97 (52%) Query: 114 QERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASN 173 ++ ++ ++ V GE +A ++ ++ + L+ RE E+L G +N Sbjct: 121 EDELLGAVRAVAAGESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTN 180 Query: 174 NEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 EIAR L IS TV+ HL N+F K+ V +RT+AV + Sbjct: 181 KEIARDLDISPRTVQVHLANIFSKLGVGSRTEAVLYG 217 >UniRef50_A4FB05 Two component system response regulator n=43 Tax=Bacteria RepID=A4FB05_SACEN Length = 235 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 2/108 (1%) Query: 105 NGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITH--SGNYRYNSTESALLTHREKE 162 +G E +V + V G+ ++ L+ S R TE + LT RE++ Sbjct: 104 SGFLLKDAPPEELVRAVHTVAAGDALLAPRVTRRLLQRFASLGVRDAGTELSGLTDRERD 163 Query: 163 ILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 +L ++ G SN EIAR+L ++E TVK+HLY++ +K+ + +RTQ V A Sbjct: 164 VLLEVAKGGSNAEIARNLGLAELTVKSHLYHVMQKLHLNSRTQLVITA 211 >UniRef50_C4DM80 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DM80_9ACTO Length = 180 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/55 (54%), Positives = 35/55 (63%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 LT RE +ILN G SN I R LF+SE+T+KTHL LF KI NR AV+ A Sbjct: 119 LTVREYQILNCAAQGKSNEHIGRELFVSEHTIKTHLRRLFDKIGAANRAHAVAIA 173 >UniRef50_C8X7K8 Transcriptional regulator, LuxR family n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8X7K8_NAKMY Length = 562 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/58 (48%), Positives = 38/58 (65%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 LT RE EIL + G +N ++A++L ISE TV HL N+ +K+ V RT AV+WA N Sbjct: 495 LTARETEILALVARGDTNRQVAQALVISEKTVARHLANVHRKLGVSTRTAAVAWARRN 552 >UniRef50_D2SB03 Two component transcriptional regulator, LuxR family n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SB03_9ACTO Length = 248 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 11/204 (5%) Query: 13 LLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISSGS--IILLD--MMEADKK 66 +L+I + A +L Q L+ L + G+ +I + + ++S + ++LLD + + D Sbjct: 41 ILVIDDHQMFAASLAQALQSEPDLLVVGQGTSIAEARNLMASAAPDVVLLDHRLPDGDGV 100 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 W + R + I +L T + +E G + + V+ G++ + Sbjct: 101 GAIAWLHAI-RPSAKIVVLTATTSDRVLVAAMEAG--AAGFIAKTQRLDDVIEGVRAAAQ 157 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 GE KL + L+ +R + A+LT RE+EIL+ L G SN +IA+ L IS +T Sbjct: 158 GESVVNVKLLTRLLPRL--HRQSGGGGAVLTEREREILDLLARGLSNADIAQQLTISVHT 215 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWA 210 V+ H+ NL K+ ++ + +S A Sbjct: 216 VRNHVANLSAKLGAHSKLEVLSIA 239 >UniRef50_Q7NCA4 LuxR family transcriptional regulatory protein n=1 Tax=Gloeobacter violaceus RepID=Q7NCA4_GLOVI Length = 232 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/63 (44%), Positives = 42/63 (66%) Query: 145 NYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRT 204 +R T++ L+ RE+EIL ++ G SN +IA L++S NTVK H+ +F K++ NRT Sbjct: 161 GHRAGVTQAVALSRREREILQLIQQGLSNQQIADHLYLSVNTVKNHMSRIFTKLSATNRT 220 Query: 205 QAV 207 QAV Sbjct: 221 QAV 223 >UniRef50_Q2SM19 ATP-dependent transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SM19_HAHCH Length = 902 Score = 58.9 bits (141), Expect = 1e-07, Method: Composition-based stats. Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 2/84 (2%) Query: 131 FTQKLASYLITHSGNYRYNSTESAL--LTHREKEILNKLRIGASNNEIARSLFISENTVK 188 F +L+ Y + R +S + L+ RE ILN L G SN EIA +L I+ +TVK Sbjct: 815 FISELSVYSAPQTRPQRNHSNSPLMEELSQRETTILNHLSAGRSNEEIAVALNIAASTVK 874 Query: 189 THLYNLFKKIAVKNRTQAVSWAND 212 THL N++ K V+ RTQA++ A + Sbjct: 875 THLRNIYAKFGVRRRTQALAIARE 898 >UniRef50_Q47NW9 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Thermobifida fusca YX RepID=Q47NW9_THEFY Length = 236 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 6/111 (5%) Query: 105 NGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRY------NSTESALLTH 158 G+ E +V ++ V RG ++ + L+ + E A LT Sbjct: 104 RGLLLRDSSPEELVRAVREVARGNAALCPQVTARLLDRLAALPAAPQASGPAAEVARLTR 163 Query: 159 REKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSW 209 RE+E+L L G +N EIAR L + E TVKTH+ + K+ +++R QAV + Sbjct: 164 REREVLRLLGRGLTNAEIARQLVLGETTVKTHVGRVLAKLGLRDRVQAVVY 214 >UniRef50_A3TM12 Putative respose regulatory protein n=2 Tax=Micrococcineae RepID=A3TM12_9MICO Length = 217 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/55 (52%), Positives = 39/55 (70%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 L+ RE+E+L + G SN+EIA+ LFIS TVKTHL +LF K+ +RT AV+ A Sbjct: 156 LSEREREVLVLVGEGLSNDEIAKQLFISRATVKTHLRHLFGKLEADSRTGAVATA 210 >UniRef50_C1XS11 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XS11_9DEIN Length = 204 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 7/162 (4%) Query: 52 SGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSM 111 S ++LLD+ +D + + LS N ++L + E+ R + +G Sbjct: 48 SPDLVLLDLQLSDGHGLSFLPRFLSLPNPPKVLILTSFLEEDRLRQALSL-GASGYLVKH 106 Query: 112 EDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGA 171 ++ G++ RGE L R A LT +E+E+L L G Sbjct: 107 AGPVALLEGIRAAGRGEVPLDPAAVRLL------ARPARNPLASLTPKEREVLTHLARGM 160 Query: 172 SNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 SN IA++L +SE T+KTH+ +L K+ +K RTQA A + Sbjct: 161 SNKAIAQALGVSEKTIKTHVSSLLAKLNLKGRTQAALLAREQ 202 >UniRef50_A1TJW9 Two component transcriptional regulator, LuxR family n=17 Tax=Betaproteobacteria RepID=A1TJW9_ACIAC Length = 256 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 47/72 (65%) Query: 144 GNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNR 203 G + ++ L+ RE+++L ++ GASN EIAR+L I+E TVK H+ ++ +K+ + +R Sbjct: 184 GTGPGAAGSASPLSAREEDVLREIARGASNKEIARALDIAETTVKIHVQHILRKLGLSSR 243 Query: 204 TQAVSWANDNLR 215 QA +A++ R Sbjct: 244 VQAAVYASERQR 255 >UniRef50_Q2T516 Transcriptional regulator, LuxR family n=52 Tax=Burkholderia RepID=Q2T516_BURTA Length = 288 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 27/52 (51%), Positives = 36/52 (69%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAV 207 LTHRE++I +R G SN IAR L + + TVKTHL +F+K+ V NRT+ V Sbjct: 232 LTHREEQIARLVRDGRSNKAIARDLALGQPTVKTHLLRMFRKLGVSNRTELV 283 >UniRef50_C7MRK0 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MRK0_SACVD Length = 226 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 15/155 (9%) Query: 58 LDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMED--QE 115 LD +EA + ++ + D +K+++L + + + Y ++D E Sbjct: 75 LDGIEATRSILASYPD--------VKVVVLTSFSEA--ERVHAALSAGAAGYVLKDAEPE 124 Query: 116 RVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNE 175 V ++ ++GE + +A L + + T LT RE++IL + G SN E Sbjct: 125 EVATAVRAAVKGEVHLDAAVARLLARRMASPQVGVTS---LTARERDILVLVGQGLSNRE 181 Query: 176 IARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 IA L ISE T +TH+ N+ K+ + +RTQA A Sbjct: 182 IADRLVISERTARTHVSNVLSKLQLSSRTQAALLA 216 >UniRef50_Q1NFH9 Probable transcriptional regulator n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NFH9_9SPHN Length = 491 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 7/100 (7%) Query: 117 VVNGLQGVLRGECYFT----QKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGAS 172 ++ ++ V++ +F+ +KLA+ H E++ LT REKE+L+ L G Sbjct: 385 LIGAIEAVMKDTNWFSRTVVEKLANLRAPHGA---ARPVETSELTRREKEVLSLLCGGGD 441 Query: 173 NNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 + IA+ + +S NT++ H+ ++ KI V R QA+ WA + Sbjct: 442 DAAIAKEMGVSRNTLRNHVARVYAKIGVNRRAQAILWARE 481 >UniRef50_A5FIE9 Two component transcriptional regulator, LuxR family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FIE9_FLAJ1 Length = 213 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 3/195 (1%) Query: 21 LQATALLQHLKQSLAITGKLHNIQRSLDDISSGSI--ILLDMMEADKKLIHYWQDTLSRK 78 LQ L + ++ I K N +L+ I G + I+LD+ + I + L ++ Sbjct: 16 LQGIISLLEQEPNITIIDKAVNGIEALEIIKKGVVDFIILDISMPEMDGIELSK-ILKKQ 74 Query: 79 NNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASY 138 + N+KIL+++T + +NG +E ++ + + GE YF ++L Sbjct: 75 HPNVKILIVSTHSNVMIVSRLIRIGVNGYLLKNAAKEELLKAINTIASGENYFAEELEEK 134 Query: 139 LITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKI 198 +++S + L+ REKEIL + + EIA FIS NTV TH NL K+ Sbjct: 135 HLSNSSKIEKQVSNLTELSSREKEILVLIAHEYNTAEIAEKTFISLNTVNTHRRNLLSKL 194 Query: 199 AVKNRTQAVSWANDN 213 KN V +A +N Sbjct: 195 NAKNTAGLVKYAVEN 209 >UniRef50_B8IQE3 Transcriptional regulator, LuxR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IQE3_METNO Length = 238 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/78 (41%), Positives = 43/78 (55%) Query: 132 TQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHL 191 T+ A+YL+ + LT RE EIL L G SN IAR L I+E TVK H+ Sbjct: 145 TKAPATYLLPTPPAAARGLGANETLTEREVEILAYLAAGLSNKLIARRLSIAEATVKIHV 204 Query: 192 YNLFKKIAVKNRTQAVSW 209 ++ +K ++NRTQA W Sbjct: 205 KSILRKTGLQNRTQAAIW 222 >UniRef50_B5G749 Two-component system response regulator n=1 Tax=Streptomyces sp. SPB74 RepID=B5G749_9ACTO Length = 259 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/55 (50%), Positives = 38/55 (69%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 LT RE E+L + G SN +IAR+L +S TVKTH+ NLF K +++R QAV +A Sbjct: 191 LTAREVEVLVLIAQGLSNADIARALHVSAATVKTHINNLFAKAGLRDRAQAVRYA 245 >UniRef50_Q1AZV4 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1AZV4_RUBXD Length = 222 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 21/203 (10%) Query: 22 QATALLQHLKQSLAITGKLHNIQRSLDDISSG-------SIILLDMMEAD-KKLIHYWQD 73 QA ALL + + G+ ++ + ++SG II L++ + D +LI ++ Sbjct: 15 QALALLFDAEPGFEVAGQAGTLKEA-RRVASGREPRPTLGIIDLNLPDGDGSQLIGELRE 73 Query: 74 TLSRKNNNIKILLLNTPEDYP--YRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYF 131 +N + L+L D R +E GV + D + +++ + + GE Sbjct: 74 ----QNPDFAALVLTASVDRADHARAVEAG--AAGVLHKSADVDEILDAARRLAAGEPLM 127 Query: 132 TQKLASYLITHSGNYRYNS----TESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 + + + +I +G R +A LT RE+E+L L G SN EIA L +S +T Sbjct: 128 SPQEVAEMIRLAGRSREEERGLRENAARLTPREREVLQALAEGLSNREIAERLHMSVDTE 187 Query: 188 KTHLYNLFKKIAVKNRTQAVSWA 210 +TH+ N+ K+ +R QA+ A Sbjct: 188 RTHMVNILSKLGAHSRLQALVLA 210 >UniRef50_B9K0P0 Two component response regulator n=1 Tax=Agrobacterium vitis S4 RepID=B9K0P0_AGRVS Length = 896 Score = 58.5 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 29/52 (55%), Positives = 38/52 (73%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAV 207 LT RE ++L +R G SN+EIA L I+ NTVK+H N+F K+ VK+RTQAV Sbjct: 840 LTQREDDVLQLMRWGLSNSEIATRLDINLNTVKSHAKNIFAKLGVKSRTQAV 891 >UniRef50_D0X6W6 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0X6W6_VIBHA Length = 225 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/55 (58%), Positives = 40/55 (72%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 LT RE E+L L++G SN EI+R L ISE TVK HL N+++K+ V NRT AVS A Sbjct: 163 LTTRECELLPWLKLGKSNWEISRLLNISERTVKYHLQNIYRKLDVHNRTHAVSKA 217 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 10/175 (5%) Query: 46 SLDDISSGSIILLDM-MEADKKLIHYWQDTLSRKNNNIKILLLNT--PEDYPYRDIENWP 102 +L + S ++++D+ + A + + ++ L K IK+++L+ E+ +R +E+ Sbjct: 42 ALAEESRPEVVVMDLQLGAGRNGVEATRE-LVEKKPEIKVVILSMYDDEELVFRALESGA 100 Query: 103 HINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNY----RYNSTESALLTH 158 G E + ++ V RGE Y ++A +I R + E LT Sbjct: 101 R--GYVLKRAGIEELTTAIRLVARGEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTE 158 Query: 159 REKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 RE E+L G +N EIAR L IS TV+ H N+ +K+ + +R V +A N Sbjct: 159 RELEVLRLAAEGLTNAEIARRLVISVKTVQAHRANIMQKLGLHDRVDLVKYAIKN 213 >UniRef50_C1B8T3 NarL family two-component response regulator n=61 Tax=Bacteria RepID=C1B8T3_RHOOB Length = 276 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 6/80 (7%) Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 G+ + +AS L+T R +T L+ RE ++L + G SN EI + LF+SE T Sbjct: 122 GDSVLSPAVASKLMT---RVRRPATS---LSPREIQVLTLVAAGRSNREIGKELFLSETT 175 Query: 187 VKTHLYNLFKKIAVKNRTQA 206 VK+HL ++F K+ VK+RT A Sbjct: 176 VKSHLVHIFGKLGVKSRTSA 195 >UniRef50_A4J308 Response regulator receiver protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J308_DESRM Length = 119 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/59 (50%), Positives = 41/59 (69%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 LT+RE E+L + G SN IA+ LFISE TVK HL +++ K+ V NRT+A +A +NL Sbjct: 59 LTNREFELLKLIAKGISNKAIAKQLFISEKTVKNHLTSIYSKLGVTNRTEATLYAVNNL 117 >UniRef50_A1AXR1 Two component transcriptional regulator, LuxR family n=2 Tax=sulfur-oxidizing symbionts RepID=A1AXR1_RUTMC Length = 209 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 10/168 (5%) Query: 44 QRSLDDISSGS--IILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTP-EDYPYRDIEN 100 ++ L +I S S IILLD+ + + TL KN I++L T ++Y R+ Sbjct: 34 EQGLAEIPSLSVDIILLDLRMPQMSGLEVLK-TLKEKNITTPIVMLTTSTQEYDLRNC-- 90 Query: 101 WPH-INGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESAL--LT 157 H G D + +V+ L V++G Q + +Y++ + E + LT Sbjct: 91 LKHGAQGYLLKDMDPDELVDALNEVVKGSIVVAQDM-TYILAKALRDELTDNEPSFDSLT 149 Query: 158 HREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQ 205 REKE+ ++ G SN IAR L IS+ TVK H+ ++ KK+++ +R + Sbjct: 150 SREKEVACQVSSGYSNKVIARELGISDGTVKLHVKSILKKLSLSSRVE 197 >UniRef50_C5BYP8 ATP-dependent transcriptional regulator, MalT-like, LuxR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BYP8_BEUC1 Length = 895 Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 29/55 (52%), Positives = 38/55 (69%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 LT RE EIL+ LR + EIARSLF+S NTVKTH +++K+ +NR +AV A Sbjct: 833 LTDRELEILDGLRSSLTAAEIARSLFVSVNTVKTHQRAVYRKLGARNRREAVRLA 887 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 10/108 (9%) Query: 113 DQERVVNGLQGVLRGECYFTQKLASYLITHSGNY-------RYNSTESAL---LTHREKE 162 + E++++ + V RGE + + S S R + T S LT RE E Sbjct: 109 EPEQLIDVITRVARGEYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIE 168 Query: 163 ILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 IL+ + G SN EIA++L IS+ TVK H+ ++ +K+AV +RTQAV +A Sbjct: 169 ILDCVARGYSNKEIAQALNISDQTVKNHITSILRKLAVNDRTQAVIYA 216 >UniRef50_D1C9R5 Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C9R5_SPHTD Length = 214 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/55 (54%), Positives = 39/55 (70%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 L+ RE EIL+ + G SN EIA +LFISE TVK H+ LF K+ V++R QAV +A Sbjct: 143 LSTREVEILDCMVRGLSNREIAEALFISEQTVKNHMSRLFHKLHVRDRLQAVLFA 197 >UniRef50_A1VT42 Two component transcriptional regulator, LuxR family n=7 Tax=cellular organisms RepID=A1VT42_POLNA Length = 224 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 64/123 (52%), Gaps = 6/123 (4%) Query: 92 DYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNST 151 +Y R IE+ G + +VN ++ V GE +F+ +L Y + +R +S Sbjct: 95 EYVKRAIESG--AKGYVLKDAPAQELVNAIRAVHAGETFFSPELQQY----TEGFRASSG 148 Query: 152 ESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAN 211 ++ LT +E L L G SN +IAR L +S TV+TH NL +K+ + + + V +A Sbjct: 149 GNSPLTPKESATLAWLACGYSNKQIARELSMSVRTVETHRLNLRRKLRITGQAELVKYAI 208 Query: 212 DNL 214 D++ Sbjct: 209 DHM 211 >UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacillus RepID=C3BET8_9BACI Length = 216 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 13/113 (11%) Query: 109 YSMEDQE--RVVNGLQGVLRGECYFTQKLASYLITH---------SGNYRYNSTESALLT 157 Y ++D E +V + V G Q + + ++ SG + E LT Sbjct: 97 YLLKDMETDAIVQAILTVHAGGAVLPQDITAQIVKELKRTKVVEISGQNQPKQVEQ--LT 154 Query: 158 HREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 RE ++L ++ +G +N EIA LFI+E TVK H+ NL K+ +++RTQA +A Sbjct: 155 EREIDVLREIGLGLNNKEIAEKLFITEGTVKNHVSNLISKLELRDRTQAAIYA 207 >UniRef50_P37640 Putative HTH-type transcriptional regulator yhjB n=98 Tax=Bacteria RepID=YHJB_ECOLI Length = 200 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/51 (54%), Positives = 37/51 (72%) Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQA 206 L+ R++EIL L G SN EI R+L IS TVK HL +L++++ VKNRTQA Sbjct: 142 LSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQA 192 >UniRef50_B6IU89 Glycerol metabolism activator AgmR n=1 Tax=Rhodospirillum centenum SW RepID=B6IU89_RHOCS Length = 205 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/58 (50%), Positives = 37/58 (63%) Query: 153 SALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 A T RE+E+L+ L G SN EIAR+L + E TVK H+ L +K+ KNRTQA A Sbjct: 141 GASFTRREREVLDFLLKGCSNKEIARALSLEEVTVKLHVRGLCRKLGAKNRTQAAMRA 198 >UniRef50_Q5WJ71 Two-component response regulator n=5 Tax=Bacillaceae RepID=Q5WJ71_BACSK Length = 210 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 14/154 (9%) Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 +EA K+LI ++ N+KI++L T D Y G D E + Sbjct: 62 IEATKRLIE--------RDPNVKIVMLTTFIDERYAIEALKAGAKGYILKDADMESLFAT 113 Query: 121 LQGVLRGECYFTQKLASY----LITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEI 176 ++ L GE ++A+ L+ HS L REKEI+ + G +N EI Sbjct: 114 IEKALLGELVLDGQVAAKVMPKLLQHSAPQEKEQIPP--LAEREKEIIRLVGQGRNNAEI 171 Query: 177 ARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 A L++S TVK ++ LF K+ V++RTQ +A Sbjct: 172 AAELYLSVGTVKNYISQLFIKLGVRDRTQLAIFA 205 >UniRef50_Q12AU1 Two component transcriptional regulator, LuxR family n=1 Tax=Polaromonas sp. JS666 RepID=Q12AU1_POLSJ Length = 246 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 59/105 (56%), Gaps = 5/105 (4%) Query: 104 INGVFYSMEDQERVVNGLQGVLRGECYFTQKL---ASYLITHSGNYR--YNSTESALLTH 158 + G+ E+ + ++ V G+ + +KL A +++H + E +LT Sbjct: 127 VRGLIPKKSPPEQWLKAIRVVHAGDIWINRKLMAEALEVLSHRPGHHNLLAELEPEILTK 186 Query: 159 REKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNR 203 RE E+++ + +G +N EIAR++ IS+NTVKTHL ++F K+ V R Sbjct: 187 REWEVVHWVGLGMTNKEIARAMTISDNTVKTHLQHVFGKLKVGRR 231 >UniRef50_B4WJL3 Response regulator receiver domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WJL3_9SYNE Length = 242 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/60 (46%), Positives = 40/60 (66%) Query: 152 ESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAN 211 E A LT RE E+L + GASN EIA+ LF+SE TVK H+ ++ ++ +++RTQA A Sbjct: 173 EVAALTPRETEVLVCIGNGASNKEIAQQLFLSEGTVKNHVTSVLSRLGLRDRTQAALLAQ 232 >UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeobacter violaceus RepID=Q7NN43_GLOVI Length = 217 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 1/137 (0%) Query: 75 LSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQK 134 L +++ I++L+L + E+ +G +R++ ++ V G +F K Sbjct: 72 LKQEHPEIRVLVLTSREEAGLVQAMLQAGADGYCLKGIGPDRLLTVIREVSAGNGWFDAK 131 Query: 135 -LASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYN 193 LA + +A LT RE+E+L + GASN EI R L IS TV+ H++ Sbjct: 132 VLAQVRSAFAVAPSEPPANAAALTEREREVLGWIARGASNPEIGRQLHISSGTVRVHVHA 191 Query: 194 LFKKIAVKNRTQAVSWA 210 + +K+ +RTQA A Sbjct: 192 ILRKLGATDRTQAAVLA 208 >UniRef50_Q5QXH3 Response regulator, LuxR family (CheY-HTH) n=1 Tax=Idiomarina loihiensis RepID=Q5QXH3_IDILO Length = 214 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 6/112 (5%) Query: 106 GVFYSMEDQERVVNGLQGVLRGECYFTQKLAS-----YLITHSGNYRYNSTESA-LLTHR 159 G+ Y + +RV+ ++ + +GE Y+ + L S ++ + + + LT + Sbjct: 98 GIIYENDHLDRVLTAIKVISQGELYYPRSLLSDKIEEMMLRRQADDSFTTVSQINSLTPQ 157 Query: 160 EKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAN 211 E +++ + GA N EIA L IS +TVKTHL ++F+K +NR + + W++ Sbjct: 158 ELKVIELVATGARNKEIAEHLNISAHTVKTHLSSIFRKTGARNRVELLKWSS 209 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P52106 Probable csgAB operon transcriptional regulatory... 292 6e-78 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 205 1e-51 UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa... 203 3e-51 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 198 1e-49 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 198 1e-49 UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 196 3e-49 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 196 5e-49 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 196 5e-49 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 196 5e-49 UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 195 9e-49 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 195 1e-48 UniRef50_C7MUJ2 Response regulator containing a CheY-like receiv... 194 1e-48 UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa... 192 6e-48 UniRef50_B2A8K6 Two component transcriptional regulator, LuxR fa... 192 8e-48 UniRef50_B2J2N1 Two component transcriptional regulator, LuxR fa... 192 8e-48 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 192 8e-48 UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus... 191 1e-47 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 190 3e-47 UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax... 190 4e-47 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 190 4e-47 UniRef50_B5JFN7 Response regulator receiver domain protein n=1 T... 190 4e-47 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 188 1e-46 UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides... 187 2e-46 UniRef50_A5V148 Two component transcriptional regulator, LuxR fa... 187 3e-46 UniRef50_C5C7H0 Response regulator containing a CheY-like receiv... 186 4e-46 UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob... 185 7e-46 UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob... 185 7e-46 UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa... 185 7e-46 UniRef50_C1TL62 Response regulator containing a CheY-like receiv... 185 8e-46 UniRef50_A3Y699 Putative two component system response regulator... 185 8e-46 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 185 9e-46 UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta... 185 1e-45 UniRef50_B0C756 Two-component transcriptional regulator, LuxR fa... 185 1e-45 UniRef50_C0WKL5 Response regulator n=6 Tax=Corynebacterium RepID... 185 1e-45 UniRef50_D1C1C8 Two component transcriptional regulator, LuxR fa... 185 1e-45 UniRef50_D1CF52 Two component transcriptional regulator, LuxR fa... 184 2e-45 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 184 2e-45 UniRef50_D1BX47 Two component transcriptional regulator, LuxR fa... 184 2e-45 UniRef50_B2A6W2 Two component transcriptional regulator, LuxR fa... 183 2e-45 UniRef50_D1BGN7 Response regulator containing a CheY-like receiv... 183 3e-45 UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacill... 183 3e-45 UniRef50_P55184 Uncharacterized transcriptional regulatory prote... 183 3e-45 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 183 3e-45 UniRef50_O07528 Uncharacterized transcriptional regulatory prote... 183 3e-45 UniRef50_A0RGC1 DNA-binding response regulator n=12 Tax=Bacillal... 183 4e-45 UniRef50_C0GJ72 Two component transcriptional regulator, LuxR fa... 183 4e-45 UniRef50_D1B9T1 Two component transcriptional regulator, LuxR fa... 183 5e-45 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 182 6e-45 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 182 6e-45 UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Act... 182 7e-45 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 182 9e-45 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 182 9e-45 UniRef50_C5C8Q1 Response regulator containing a CheY-like receiv... 181 1e-44 UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibac... 181 2e-44 UniRef50_A6TVR4 Two component transcriptional regulator, LuxR fa... 181 2e-44 UniRef50_C0Z4M7 Two-component response regulator n=7 Tax=Bacilla... 181 2e-44 UniRef50_A7NP18 Two component transcriptional regulator, LuxR fa... 181 2e-44 UniRef50_A9AX03 Two component transcriptional regulator, LuxR fa... 180 2e-44 UniRef50_C6D0G6 Two component transcriptional regulator, LuxR fa... 180 3e-44 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 180 3e-44 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 180 3e-44 UniRef50_D1C6S1 Two component transcriptional regulator, LuxR fa... 179 4e-44 UniRef50_P94439 Uncharacterized transcriptional regulatory prote... 179 4e-44 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 179 5e-44 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 179 5e-44 UniRef50_C4ZEG3 Two-component response regulator (Extracellular ... 179 7e-44 UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacilla... 178 8e-44 UniRef50_B2JVJ8 Two component transcriptional regulator, LuxR fa... 178 9e-44 UniRef50_C3JVF4 Two component transcriptional regulator, LuxR fa... 178 1e-43 UniRef50_B5XUA0 Transcriptional regulator, LuxR family n=5 Tax=K... 177 2e-43 UniRef50_Q027R2 Two component transcriptional regulator, LuxR fa... 177 2e-43 UniRef50_A9U739 Predicted protein n=2 Tax=cellular organisms Rep... 177 2e-43 UniRef50_D0I549 DNA-binding HTH domain-containing protein n=1 Ta... 177 2e-43 UniRef50_C1YGP4 Response regulator containing a CheY-like receiv... 177 2e-43 UniRef50_A8LG56 Two component transcriptional regulator, LuxR fa... 177 3e-43 UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR fa... 176 4e-43 UniRef50_B8FX94 Two component transcriptional regulator, LuxR fa... 176 4e-43 UniRef50_B2JVP2 Two component transcriptional regulator, LuxR fa... 176 5e-43 UniRef50_B9MPQ9 Two component transcriptional regulator, LuxR fa... 176 5e-43 UniRef50_B4WJL3 Response regulator receiver domain protein n=1 T... 176 5e-43 UniRef50_A3CKH3 Two-component system transcriptional regulator (... 176 6e-43 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 176 6e-43 UniRef50_D1BXU0 Two component transcriptional regulator, LuxR fa... 176 7e-43 UniRef50_A7HS72 Two component transcriptional regulator, LuxR fa... 175 7e-43 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 175 7e-43 UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeoba... 175 7e-43 UniRef50_D1CI66 Two component transcriptional regulator, LuxR fa... 175 7e-43 UniRef50_A4FB05 Two component system response regulator n=43 Tax... 175 9e-43 UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=P... 175 9e-43 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 175 9e-43 UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphy... 174 1e-42 UniRef50_C1TRD8 Response regulator containing a CheY-like receiv... 174 1e-42 UniRef50_Q1N2F1 Regulatory protein CsgD n=1 Tax=Bermanella maris... 174 1e-42 UniRef50_C5C4U8 Two component transcriptional regulator, LuxR fa... 174 1e-42 UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V... 174 2e-42 UniRef50_B1ZY58 Two component transcriptional regulator, LuxR fa... 174 2e-42 UniRef50_D2SFS4 Two component transcriptional regulator, LuxR fa... 174 2e-42 UniRef50_D0MHE1 Two component transcriptional regulator, LuxR fa... 174 2e-42 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 173 3e-42 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 173 3e-42 UniRef50_D1BCA8 Two component transcriptional regulator, LuxR fa... 173 4e-42 UniRef50_C1I7X4 Two-component system response regulator n=1 Tax=... 173 5e-42 UniRef50_C1YU02 Response regulator containing a CheY-like receiv... 173 5e-42 UniRef50_C1B8T3 NarL family two-component response regulator n=6... 173 5e-42 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 172 6e-42 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 172 7e-42 UniRef50_UPI0001789C57 two component transcriptional regulator, ... 172 7e-42 UniRef50_B5JPJ0 Sigma-70, region 4 family n=3 Tax=Verrucomicrobi... 172 8e-42 UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteri... 172 8e-42 UniRef50_C8UTK6 Two-component response regulator n=39 Tax=Bacill... 171 1e-41 UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiob... 171 1e-41 UniRef50_C7PPD5 Two component transcriptional regulator, LuxR fa... 171 1e-41 UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmic... 171 1e-41 UniRef50_B2A7N5 Two component transcriptional regulator, LuxR fa... 171 1e-41 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 171 2e-41 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 171 2e-41 UniRef50_C2RNB5 Two-component protein Kinase n=1 Tax=Bacillus ce... 171 2e-41 UniRef50_Q06YY8 Two-component system response regulator n=2 Tax=... 171 2e-41 UniRef50_Q1QSA8 Transcriptional regulator, LuxR family n=1 Tax=C... 171 2e-41 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 170 2e-41 UniRef50_C5VAN3 Two component transcriptional regulator, LuxR fa... 170 3e-41 UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri... 170 3e-41 UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Synt... 170 4e-41 UniRef50_C5VFN2 Two component transcriptional regulator, LuxR fa... 169 5e-41 UniRef50_B9JKP6 Two-component response regulator protein n=2 Tax... 169 6e-41 UniRef50_B1L0K3 DNA-binding response regulator, LuxR family n=22... 169 6e-41 UniRef50_Q7UVB4 Nitrate/nitrite regulatory protein narP n=1 Tax=... 169 6e-41 UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microsc... 169 7e-41 UniRef50_UPI00018507A5 two component LuxR family transcriptional... 169 7e-41 UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paeniba... 169 7e-41 UniRef50_C7MRK0 Response regulator containing a CheY-like receiv... 169 7e-41 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 169 8e-41 UniRef50_B9XH34 Two component transcriptional regulator, LuxR fa... 168 9e-41 UniRef50_D2PS71 Two component transcriptional regulator, LuxR fa... 168 1e-40 UniRef50_Q5WJ71 Two-component response regulator n=5 Tax=Bacilla... 168 1e-40 UniRef50_Q7MFD8 DNA-binding HTH domain-containing protein n=9 Ta... 168 1e-40 UniRef50_C0EEH8 Putative uncharacterized protein n=1 Tax=Clostri... 168 1e-40 UniRef50_B4D831 Two component transcriptional regulator, LuxR fa... 168 1e-40 UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexac... 168 2e-40 UniRef50_UPI0001B502C9 two component LuxR family transcriptional... 167 2e-40 UniRef50_C6XAG0 Two component transcriptional regulator, LuxR fa... 167 2e-40 UniRef50_C6CWJ3 Two component transcriptional regulator, LuxR fa... 167 3e-40 UniRef50_Q3SG39 Two Component Transcriptional Regulator, LuxR fa... 167 3e-40 UniRef50_Q73CG3 DNA-binding response regulator, LuxR family n=10... 166 4e-40 UniRef50_B1WQK4 Two-component response regulator n=19 Tax=Cyanob... 166 4e-40 UniRef50_A6M052 Two component transcriptional regulator, LuxR fa... 166 5e-40 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 166 5e-40 UniRef50_C0GHS5 Two component transcriptional regulator, LuxR fa... 166 5e-40 UniRef50_Q1D523 DNA-binding response regulator, LuxR family n=2 ... 166 6e-40 UniRef50_B2KE01 Two component transcriptional regulator, LuxR fa... 166 6e-40 UniRef50_C1XS11 Response regulator containing a CheY-like receiv... 166 7e-40 UniRef50_A9KNL7 Two component transcriptional regulator, LuxR fa... 165 7e-40 UniRef50_Q0S3P7 Response regulator, two-component system n=11 Ta... 165 8e-40 UniRef50_C0YVW6 LuxR family response regulator n=1 Tax=Chryseoba... 165 9e-40 UniRef50_Q0A822 Two component transcriptional regulator, LuxR fa... 165 9e-40 UniRef50_C6W1C9 Two component transcriptional regulator, LuxR fa... 165 9e-40 UniRef50_C1Z9N2 Response regulator containing a CheY-like receiv... 165 9e-40 UniRef50_A7K1C7 Transcriptional regulator VpsT n=3 Tax=Vibrio Re... 164 2e-39 UniRef50_A6CUN0 Transcriptional regulator, LuxR family protein n... 164 2e-39 UniRef50_A1TJW9 Two component transcriptional regulator, LuxR fa... 164 3e-39 UniRef50_B9ZR28 Transcriptional regulator, LuxR family n=1 Tax=T... 164 3e-39 UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR fa... 163 3e-39 UniRef50_P31802 Nitrate/nitrite response regulator protein narP ... 163 3e-39 UniRef50_A9WVF8 Two component response regulator n=1 Tax=Renibac... 163 3e-39 UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax... 163 3e-39 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 163 3e-39 UniRef50_Q0HL36 Two component transcriptional regulator, LuxR fa... 163 3e-39 Sequences not found previously or not previously below threshold: UniRef50_C1RMQ2 Response regulator containing a CheY-like receiv... 184 2e-45 UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=... 184 2e-45 UniRef50_C6BTX3 Two component transcriptional regulator, LuxR fa... 183 4e-45 UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Ac... 183 4e-45 UniRef50_C7NKN7 Response regulator containing a CheY-like receiv... 182 7e-45 UniRef50_B0C955 Two-component transcriptional regulator, LuxR fa... 181 1e-44 UniRef50_D0LE76 Response regulator receiver n=2 Tax=Actinomyceta... 180 2e-44 UniRef50_C7Q058 Two component transcriptional regulator, LuxR fa... 179 5e-44 UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=... 178 8e-44 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 178 1e-43 UniRef50_D1VBH1 Two component transcriptional regulator, LuxR fa... 178 1e-43 UniRef50_A0K2I9 Two component transcriptional regulator, LuxR fa... 178 2e-43 UniRef50_C7MLQ9 Response regulator containing a CheY-like receiv... 177 2e-43 UniRef50_C3AL44 Response regulator receiver n=3 Tax=Bacillus Rep... 176 3e-43 UniRef50_UPI0001789139 two component transcriptional regulator, ... 176 7e-43 UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 175 7e-43 UniRef50_Q04VJ6 Receiver component of a two-component response r... 175 8e-43 UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa... 175 1e-42 UniRef50_C6WIC9 Two component transcriptional regulator, LuxR fa... 174 1e-42 UniRef50_A8ZMB6 Two-component transcriptional regulator, LuxR fa... 174 1e-42 UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermop... 174 2e-42 UniRef50_C7MN84 Response regulator containing a CheY-like receiv... 174 2e-42 UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomyceta... 174 2e-42 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 173 3e-42 UniRef50_B2J8J5 Two component transcriptional regulator, LuxR fa... 173 3e-42 UniRef50_C4DM40 Response regulator containing a CheY-like receiv... 173 4e-42 UniRef50_D2PZY5 Two component transcriptional regulator, LuxR fa... 173 5e-42 UniRef50_A5URU4 Two component transcriptional regulator, LuxR fa... 171 1e-41 UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR fa... 171 1e-41 UniRef50_B8GUD1 Two component transcriptional regulator, LuxR fa... 171 1e-41 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 171 1e-41 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 171 2e-41 UniRef50_C4DCK3 Response regulator containing a CheY-like receiv... 171 2e-41 UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR fa... 170 2e-41 UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR fa... 170 3e-41 UniRef50_A8L3K7 Two component transcriptional regulator, LuxR fa... 170 3e-41 UniRef50_B9XB02 Two component transcriptional regulator, LuxR fa... 170 3e-41 UniRef50_C0Z9R4 Two-component hybrid sensor and regulator n=1 Ta... 169 4e-41 UniRef50_D1XLE6 Two component transcriptional regulator, LuxR fa... 169 4e-41 UniRef50_D2B5Y0 Response regulator receiver protein n=14 Tax=Act... 169 5e-41 UniRef50_UPI00018742FB two component transcriptional regulator, ... 169 5e-41 UniRef50_B1XRB7 Response regulator receiver, LuxR domain n=14 Ta... 169 7e-41 UniRef50_A3WDJ9 Two-component response regulator n=1 Tax=Erythro... 169 8e-41 UniRef50_C7MXL4 Response regulator containing a CheY-like receiv... 168 1e-40 UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeoba... 168 1e-40 UniRef50_C5SGD8 Two component transcriptional regulator, LuxR fa... 168 1e-40 UniRef50_D1C3I4 Two component transcriptional regulator, LuxR fa... 168 1e-40 UniRef50_D2PZN7 Two component transcriptional regulator, LuxR fa... 168 1e-40 UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=... 168 2e-40 UniRef50_B9XA37 Two component transcriptional regulator, LuxR fa... 168 2e-40 UniRef50_C7R398 Two component transcriptional regulator, LuxR fa... 167 2e-40 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 167 3e-40 UniRef50_UPI0001AEC67C two-component system regulatory protein n... 167 3e-40 UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryoc... 167 3e-40 UniRef50_C5SBA1 Two component transcriptional regulator, LuxR fa... 167 3e-40 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 166 3e-40 UniRef50_C4RJG1 Two-component system response regulator receiver... 166 4e-40 UniRef50_A4FAA4 Two component system response regulator n=2 Tax=... 166 4e-40 UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece... 166 4e-40 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 166 4e-40 UniRef50_A9B4P1 Two component transcriptional regulator, LuxR fa... 166 5e-40 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 166 5e-40 UniRef50_B5JTE5 Two-component system regulatory protein n=1 Tax=... 166 5e-40 UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 T... 166 6e-40 UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococc... 165 7e-40 UniRef50_A9AZR3 Two component transcriptional regulator, LuxR fa... 165 9e-40 UniRef50_A8L345 Two component transcriptional regulator, LuxR fa... 165 1e-39 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 165 1e-39 UniRef50_C1XWT0 Two component transcriptional regulator, LuxR fa... 165 1e-39 UniRef50_C2AL02 Response regulator containing a CheY-like receiv... 165 1e-39 UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID... 164 1e-39 UniRef50_C8VWU8 Two component transcriptional regulator, LuxR fa... 164 1e-39 UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa... 164 2e-39 UniRef50_A6TUG7 Two component transcriptional regulator, LuxR fa... 164 2e-39 UniRef50_Q4ZV39 Regulatory protein, LuxR:Response regulator rece... 164 2e-39 UniRef50_D1BUI8 Two component transcriptional regulator, LuxR fa... 164 2e-39 UniRef50_A9U6E4 Predicted protein (Fragment) n=1 Tax=Physcomitre... 164 2e-39 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 164 2e-39 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 164 2e-39 UniRef50_D1V9H6 Two component transcriptional regulator, LuxR fa... 164 2e-39 UniRef50_C9Z3C4 Putative two-component system response regulator... 164 2e-39 UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 ... 163 3e-39 UniRef50_UPI0001788591 two component transcriptional regulator, ... 163 3e-39 >UniRef50_P52106 Probable csgAB operon transcriptional regulatory protein n=102 Tax=Enterobacteriaceae RepID=CSGD_ECOLI Length = 216 Score = 292 bits (748), Expect = 6e-78, Method: Composition-based stats. Identities = 216/216 (100%), Positives = 216/216 (100%) Query: 1 MFNEVHSIHGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGSIILLDM 60 MFNEVHSIHGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGSIILLDM Sbjct: 1 MFNEVHSIHGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGSIILLDM 60 Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG Sbjct: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 Query: 121 LQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL 180 LQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL Sbjct: 121 LQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL 180 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR 216 FISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR Sbjct: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR 216 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 205 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 17/218 (7%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 ++LI L + + L +Q + + + +L + ++++D+ Sbjct: 38 RIVLIDDHKLFREGIKRILDFEQDFEVVAEGSDGDEALALVERYKPDVVIMDINMPHVNG 97 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + + + K+++L+ +D Y G D + ++ ++ V G Sbjct: 98 VEATRQLI-EAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVRVVAEG 156 Query: 128 ECYFTQKLASYLITHSGNYRYNST------------ESALLTHREKEILNKLRIGASNNE 175 Y K+ L+ LLT RE E+L L G SN Sbjct: 157 GSYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADGKSNKG 216 Query: 176 IARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 IA +L+ISE TVK H+ N+ +K+ V +RTQAV A N Sbjct: 217 IADALYISEKTVKNHVSNILQKLNVNDRTQAVVVAIKN 254 >UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=Q1AVR6_RUBXD Length = 220 Score = 203 bits (517), Expect = 3e-51, Method: Composition-based stats. Identities = 50/209 (23%), Positives = 97/209 (46%), Gaps = 9/209 (4%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADKKL 67 ++++ +L L L L++ + + G+ + +L+ + + ++L+D+ Sbjct: 6 RVMIVEDQALMREGLRTLLDLEEGVEVVGEAADGVEALERLPGARPEVVLVDVRMPRMDG 65 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + L R++ + ++L T +D Y G E + ++ V RG Sbjct: 66 IQLI-ERLGREHPEVAAIILTTFDDDEYVFRGLRAGARGYILKDTPSEELAAAIEKVHRG 124 Query: 128 ECYFTQKLASYLITHSGN----YRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 E + +I+ G S L+ RE E+L + GASN EIAR+L+I+ Sbjct: 125 EAVLDGPITLKVISELGRLSKGPAGPQPGSGGLSEREMEVLRLVASGASNREIARALYIT 184 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 E TVK H+ ++ +K+ ++RTQA +A + Sbjct: 185 EGTVKNHISSILRKLGFRDRTQAALYALE 213 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 6/205 (2%) Query: 12 TLLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +LL+ L L L+Q + G+ + + ++ + S ++++D++ Sbjct: 20 RVLLVDDHPLLRHGLRALLEQVGGAEVVGEAGDGEEAIALVLSLNPDVVVMDLVMPGVTG 79 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + R+ ++ +L+L ED G D + ++ V RG Sbjct: 80 IEATRTLIDRR-PDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVRAVARG 138 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 E + +A I S LT RE+EIL+ L G SN EIAR LF+S+ TV Sbjct: 139 EAVYGPAVARR-IRRFLTTGPESGPFPELTQREREILDLLASGKSNAEIARRLFLSQKTV 197 Query: 188 KTHLYNLFKKIAVKNRTQAVSWAND 212 K HL ++F K+ V +RTQAV A Sbjct: 198 KNHLTSIFAKLQVADRTQAVVRARR 222 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 198 bits (503), Expect = 1e-49, Method: Composition-based stats. Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 5/202 (2%) Query: 12 TLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 TLLL+ + + T L + L + G+ + + ++ +IL+D+ Sbjct: 16 TLLLVDDHPVVRKGTRELLEGEADLRVVGEAESGEEAILKARQLMPDVILMDVSMPGMNG 75 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + + + IL+L + +D Y G ++ ++ ++ V G Sbjct: 76 IEATR-AIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVRAVAAG 134 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 E +A ++ ++ + L+ RE E+L G +N EIAR L IS TV Sbjct: 135 ESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLDISPRTV 194 Query: 188 KTHLYNLFKKIAVKNRTQAVSW 209 + HL N+F K+ V +RT+AV + Sbjct: 195 QVHLANIFSKLGVGSRTEAVLY 216 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 196 bits (500), Expect = 3e-49, Method: Composition-based stats. Identities = 60/215 (27%), Positives = 95/215 (44%), Gaps = 7/215 (3%) Query: 5 VHSIHGHTLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDM 60 + I T+L+ SL + + L+ L + G+ Q +++ +I++D+ Sbjct: 1 MTDIEKITILIADDHSLVREGIRKILELEPDLQVVGEAATGQEAIEMTRRYQPQVIIMDI 60 Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 I + + ++ I IL L +D Y ++G E +V Sbjct: 61 NMPGLNGIEATK-VIRQEWPQIAILALTIHDDEEYIIELLRSGVSGYVLKDISAEELVQA 119 Query: 121 LQGVLRGECYFTQKLASYLIT--HSGNYRYNSTESALLTHREKEILNKLRIGASNNEIAR 178 + V RG +A +I + S LT RE+EIL + +G SN EIAR Sbjct: 120 VYQVARGARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNREIAR 179 Query: 179 SLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 LFISE TVK HL ++F KI V +RTQA +A + Sbjct: 180 ELFISEKTVKNHLTHIFHKIGVSDRTQAALYALKH 214 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 196 bits (498), Expect = 5e-49, Method: Composition-based stats. Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 8/214 (3%) Query: 7 SIHGHTLLLITKSSLQATALLQ--HLKQSLAITGKLHNIQRSL--DDISSGSIILLDMME 62 S+ +L+ +L L Q L+ + + G + + ++ S ++LLD+ Sbjct: 7 SVKKINVLIADDHALVRQGLKQIIELEPDIKVIGLAADGEEAVLKTQQLSPDVVLLDISM 66 Query: 63 ADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 + I + L ++ IKI++L ED Y NG + E ++ ++ Sbjct: 67 PKQNGIQTLRR-LKDMDSTIKIIMLTFHEDREYLFETINLGANGYVLKDAESESLIKAIR 125 Query: 123 GVLRGECYFTQKLASYLITHSGNYRYNSTE---SALLTHREKEILNKLRIGASNNEIARS 179 V +G Y LA+ L+ S + LT RE E+L L G +N EI Sbjct: 126 DVYQGLNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINNKEIGDC 185 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 LFISE TVK H+ N+FKKI V +RTQA +A + Sbjct: 186 LFISEKTVKNHVSNIFKKINVNDRTQAAIYAYKH 219 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 196 bits (498), Expect = 5e-49, Method: Composition-based stats. Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 9/210 (4%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 +L++ L ++ L+ + + G+ N + +++ + LLD+ Sbjct: 11 KVLVVDDHELFRRGVVTVLRSTPGIYVVGEAGNGREAIECFQTLQPDVTLLDIHMPVCNG 70 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + + N N KIL+L E +G ER++ ++ V G Sbjct: 71 LETAR-KMREANPNTKILMLTVSETEEMLFEAVKSGASGYVLKSVSPERLIECVRQVYEG 129 Query: 128 ECYFTQKLASYLITHSGNYR----YNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 E LA +I +S LT RE+E+L L GASN EIAR+LFIS Sbjct: 130 EPVVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIARALFIS 189 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 ENTV+ H+ ++ K+ + NR QA ++A N Sbjct: 190 ENTVRNHVRHILDKLHLSNRAQAAAYAVRN 219 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 196 bits (498), Expect = 5e-49, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 7/209 (3%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADKKL 67 LLL+ + L+ L ++ I G+ N + +L + ++L+D+ Sbjct: 16 KLLLVEDHHIVRRGLVFFLKTREEFEIVGEAENGEDALTFVRTERPDVVLMDLSMPKMDG 75 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + + + IKIL+L++ + Y +G E++V + + G Sbjct: 76 IEATKQ-IKQYDETIKILILSSFSEQDYVLPALEAGADGYQLKEVQPEQLVASIIAIYEG 134 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 F K+ L+ S + N ++LT RE+E+L ++ G SN EIA L I+E TV Sbjct: 135 NANFHPKVTPALLGRSAVKKEN--PFSMLTKREQEVLQEIAKGRSNKEIAAELHITEQTV 192 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDNLRR 216 KTH+ N+ K+ V +RTQA +A + + Sbjct: 193 KTHVSNILAKLEVDDRTQAALYAVKHGEK 221 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 195 bits (496), Expect = 9e-49, Method: Composition-based stats. Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 5/206 (2%) Query: 12 TLLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +L++ + A+ L+ + + G+ + L+ + + IL+D+ K Sbjct: 6 KILVVDDHAFLRDAIRSILEDESDMNVVGEASSGDGVLEKVEACRPDCILMDINLPGKNG 65 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + + N ++L+ E Y +G E+VV ++ + RG Sbjct: 66 IEAT-ELVKKNYPNCRVLVFTMYEHDEYLMDALQAGADGYLLKDSSSEQVVAAIRMLYRG 124 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 + ++ LIT+ + LT REKEIL +L G SN EIA +L+IS+ TV Sbjct: 125 DSVIHPRMTKKLITYHQQKMKVESNENELTEREKEILFELVKGLSNKEIAEALYISDKTV 184 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDN 213 K H+ +FKK+ VK+R+QAV +A N Sbjct: 185 KIHINKIFKKLNVKSRSQAVIYAVRN 210 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 195 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 8/208 (3%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADKKL 67 LL+ L L + ++ +++ G++ N Q+++D + I+L+D+ Sbjct: 6 KLLIADDHILIREGLRKILSIEPHISVVGEVTNGQQAVDYCLKNPVDIVLMDINMPIMNG 65 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + + N NI I+ L + Y I+G ++++ + GV +G Sbjct: 66 IEACRQ-IKKLNPNIGIIALTIHDQDEYLFELIKYGISGYVLKDIHPDQLIKTILGVAQG 124 Query: 128 ECYFTQKLASYLITHSGNYR---YNSTESALLTHREKEILNKLRIGASNNEIARSLFISE 184 E + L + ++ Y+ + LT RE E+L ++ G SN IA +L+ISE Sbjct: 125 ESFIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIANALYISE 184 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWAND 212 TVK HL N+F+KI V +RTQA +A Sbjct: 185 KTVKNHLTNIFQKIGVADRTQAALYAIK 212 >UniRef50_C7MUJ2 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=101 Tax=Bacteria RepID=C7MUJ2_SACVD Length = 239 Score = 194 bits (494), Expect = 1e-48, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 91/210 (43%), Gaps = 8/210 (3%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 ++L L + + + G+ + +++ + ++L+D+ Sbjct: 22 RVVLADDQDLVRAGFRVILSSDDGIEVVGEAGDGWEAVEVATRERADVVLMDVQMPKLDG 81 Query: 68 IHYWQDTL--SRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 + + L + ++ K+++L T + Y +G E ++ ++ V Sbjct: 82 LEATRRLLGPAGADHPTKVIILTTFDREDYLFEALRAGASGFLLKNASPEDLIESVRIVA 141 Query: 126 RGECYFTQKLASYLITHSGNYRYNST--ESALLTHREKEILNKLRIGASNNEIARSLFIS 183 RG+ + ++ +I + LT RE E+L+ L GASN EIAR L + Sbjct: 142 RGDALLSPEVTRRVIARFSAPAVTGPTRRPSELTDREFEVLSLLAKGASNAEIARQLVLG 201 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 E TVKTH+ + K+ +++RT AV +A +N Sbjct: 202 ETTVKTHVSRILTKLNLRDRTHAVVFAYEN 231 >UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4 Tax=Streptomyces RepID=D1XHI5_9ACTO Length = 222 Score = 192 bits (489), Expect = 6e-48, Method: Composition-based stats. Identities = 48/199 (24%), Positives = 86/199 (43%), Gaps = 10/199 (5%) Query: 22 QATALLQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKLIHYWQDTLSRKN 79 + +L L + + G + ++ ++ + ++L+D+ + + + +++ Sbjct: 12 EGIVMLLGLLPGIEVVGAAKDGDEAVALVAEKAPDVVLMDLRMPRCDGVEATRR-IRKEH 70 Query: 80 NNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYL 139 ++++L T D G E +V + V+ GE + K+ L Sbjct: 71 PRTQVVVLTTFADDDSLFTALQAGARGYLTKDARGEEIVQAIDAVMSGEAGLSPKVQRRL 130 Query: 140 ITHSGNYRYNSTESAL-------LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLY 192 + AL LT RE E+L + G SN EIAR+L +S TVKTH+ Sbjct: 131 LERVTGSETVPAPCALPSELPDGLTPREAEVLVLIAEGLSNREIARALHVSAATVKTHIN 190 Query: 193 NLFKKIAVKNRTQAVSWAN 211 NLF K ++RTQAV +A Sbjct: 191 NLFAKTGARDRTQAVRYAY 209 >UniRef50_B2A8K6 Two component transcriptional regulator, LuxR family n=9 Tax=Clostridia RepID=B2A8K6_NATTJ Length = 228 Score = 192 bits (488), Expect = 8e-48, Method: Composition-based stats. Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 13/213 (6%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 +LL +L L + L ++ LA+ G+ N + +D + +IIL+D+ Sbjct: 11 RILLADDHALFRQGLKKILDMEEDLAVCGEAQNGEEVVDKVKLLKPNIILMDINMPLLNG 70 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + + + K++ L ED Y G + +V +Q V +G Sbjct: 71 VEATK-YVKEVSPETKVIALTIHEDEEYLFEIVKEGAAGFLLKDVETPTLVQAIQEVNKG 129 Query: 128 ECYFTQKLASYLITHSGNYRYNSTES--------ALLTHREKEILNKLRIGASNNEIARS 179 + + L+ NS + + LT REKEIL + G +N EI++ Sbjct: 130 NSFIHPTITHKLLGEFNRLAQNSPRNIKSDEAVQSELTGREKEILELMAQGYTNKEISKE 189 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 L+ISE TVK H+ N+ +K+ V +RTQAV A Sbjct: 190 LYISEKTVKNHVSNILRKMDVTDRTQAVITALK 222 >UniRef50_B2J2N1 Two component transcriptional regulator, LuxR family n=12 Tax=Cyanobacteria RepID=B2J2N1_NOSP7 Length = 232 Score = 192 bits (488), Expect = 8e-48, Method: Composition-based stats. Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 10/214 (4%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 LL++ SL L L+ L + G N + +L+ ++ ++L+D+ + Sbjct: 10 RLLIVDDQSLIRQGLKAMLEQEPDLEVVGDAENGKVALELVAELQPDVVLMDIRMPEMDG 69 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + + NIK+L+L+T +D Y G + + ++ G Sbjct: 70 RTATK-LIMQSFPNIKVLVLSTFDDDSYLTGAMRAGAKGYLLKDMPSSELADAIRFGHSG 128 Query: 128 ECYFTQKLASYLI-----THSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFI 182 F L L+ + S N S++ + +T RE+E+L + +GA+N EIA+ L+I Sbjct: 129 YTQFGPGLFDKLLVTEAASASANQNSASSKPSEITAREQEVLCLIGVGATNREIAQQLYI 188 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR 216 +E TVKTH+ ++ ++ +KNR+Q +AN L + Sbjct: 189 TEGTVKTHVTSILSRLNLKNRSQLAIYANSVLNQ 222 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 192 bits (488), Expect = 8e-48, Method: Composition-based stats. Identities = 44/210 (20%), Positives = 87/210 (41%), Gaps = 10/210 (4%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +L+ +L L L + + + + + ++ + ++LLD+ + Sbjct: 88 KVLVADDHALFRRGLEMVLRQEPDIQLVAEASDGAEAVARAAETLPDVVLLDVRMPKRTG 147 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + KI++L ++ G + V ++ V G Sbjct: 148 IEACA-AIKEVCPSAKIIMLTISDEEADLYEAIKAGAMGYLLKEISIDEVAAAIRAVHGG 206 Query: 128 ECYFTQKLASYLITHS-----GNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFI 182 + + +AS L+ + + LT RE E+L + G +N +IA+ LFI Sbjct: 207 QSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDIAKQLFI 266 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 SENTVK H+ N+ +K+ + +R +AV +A Sbjct: 267 SENTVKNHVRNILEKLQLHSRMEAVVYAVR 296 >UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA Length = 218 Score = 191 bits (486), Expect = 1e-47, Method: Composition-based stats. Identities = 51/215 (23%), Positives = 97/215 (45%), Gaps = 13/215 (6%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +L++ +L T + L K + + G+ N + +L+ ++S ++L+D+M Sbjct: 4 RVLIVDDQALIRTGIATLLSRKADIEVVGQAGNGREALELVASLDPDVVLMDVMMPVMDG 63 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + L+ + +++L T D G D + + ++ V G Sbjct: 64 VEATR-KLAERGPRPAVIMLTTFHDDERVLQSIAAGARGYLLKDVDHRVLADSIRTVAGG 122 Query: 128 ECYFTQKLASYLITHSGNYRY--------NSTESALLTHREKEILNKLRIGASNNEIARS 179 ++ + L+ + S +++LT RE++IL L G +N EI Sbjct: 123 GALIHPQIIAQLLPRLASLAPTPVTASSSPSDVTSILTPRERDILRLLAQGYTNQEIGEQ 182 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 L +S TVK HL +F K+AV++RTQA WA ++L Sbjct: 183 LALSVGTVKNHLSVIFAKLAVRDRTQAALWAREHL 217 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 190 bits (483), Expect = 3e-47, Method: Composition-based stats. Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 6/206 (2%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 +LL+ + L L+ + + + G+ + + + +IL+D+ Sbjct: 9 RVLLVDDHQVVRRGLRTFLEVQEDIEVVGEASDGEEGIARAEELRPDVILMDIKMPGTDG 68 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + L N ++L++ + + G Y D + + ++ V G Sbjct: 69 IEALRR-LRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAGAIRSVHAG 127 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 ++A L+T + +S+ LT RE+E+L+ + G SN EIAR+L +SE TV Sbjct: 128 HVLLQPEVAVALLTQD-DQGPSSSRGGALTDREREVLSHIADGRSNREIARALVLSEKTV 186 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDN 213 KTH+ N+ K+ V +RTQA WA + Sbjct: 187 KTHVSNILMKLDVADRTQAALWAVRH 212 >UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax=Bacillales RepID=DEGU_BREBE Length = 236 Score = 190 bits (482), Expect = 4e-47, Method: Composition-based stats. Identities = 47/220 (21%), Positives = 95/220 (43%), Gaps = 20/220 (9%) Query: 13 LLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKLI 68 +++I L + + L + + + + +++ + +IL+D+ + Sbjct: 12 IVIIDDHQLFREGVKRILAMEPEFEVVADGEDGENAVELVEKYNPDVILMDINMPKVNGV 71 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 +D + ++ ++K+L+L+ +D Y +G D + ++ ++ V +G Sbjct: 72 EATRDLI-QRYPDVKVLVLSIHDDESYVTHVLKTGASGYLLKEMDADALIEAVKVVAQGG 130 Query: 129 CYFTQKLASYLITHSGNYRYNSTESA---------------LLTHREKEILNKLRIGASN 173 Y K+ LI + + +LT RE E+L + G SN Sbjct: 131 AYIHPKVTHNLIKEYRRLVNEDEQESSEIGFKEVEYRKPLHILTRRECEVLQLMTDGYSN 190 Query: 174 NEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 I +L+ISE TVK H+ N+ +K+ V +RTQAV + N Sbjct: 191 RMIGEALYISEKTVKNHVSNILQKMNVNDRTQAVVESIKN 230 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 190 bits (482), Expect = 4e-47, Method: Composition-based stats. Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 15/215 (6%) Query: 13 LLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSL--DDISSGSIILLDMMEADKKLI 68 +L++ L + + L+ I G+ + +L D S +IL+D+ + Sbjct: 6 ILIVDDHPLFRSGIRWSLEQNPQFVIVGEAADGSEALRLADELSPDVILVDLSLPGMNGL 65 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 + L R+ +++L +D + + E++++ + V RGE Sbjct: 66 EVAR-ALKRRQPQAGVIILTMHQDDEQLFNAIRAGASAYCTKDIEPEQLIDVITRVARGE 124 Query: 129 CYFT------QKLASYLITHSGNY----RYNSTESALLTHREKEILNKLRIGASNNEIAR 178 +AS ++ R +S + LT RE EIL+ + G SN EIA+ Sbjct: 125 YLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVARGYSNKEIAQ 184 Query: 179 SLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 +L IS+ TVK H+ ++ +K+AV +RTQAV +A + Sbjct: 185 ALNISDQTVKNHITSILRKLAVNDRTQAVIYALRH 219 >UniRef50_B5JFN7 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFN7_9BACT Length = 220 Score = 190 bits (482), Expect = 4e-47, Method: Composition-based stats. Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 12/211 (5%) Query: 13 LLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKLI 68 ++L +L L L L SL I G+ HN Q +L+ I+L+D+ + Sbjct: 7 IVLADDQALFLEGLKTLLSLDDSLEIVGECHNGQEALEACRRLRPQIVLMDLNMPVMDGV 66 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 + + ++ + +L L T +D +G +++V ++ V GE Sbjct: 67 AATK-AIKQELPEVNVLTLTTFDDDERVFEALKAGSSGYLLKDTPSKQLVEAIRAVSSGE 125 Query: 129 CYFTQKLASYLITHSGNYRYNSTES-------ALLTHREKEILNKLRIGASNNEIARSLF 181 + +AS ++ + L+ RE+++L L G SN EIA L Sbjct: 126 SFLQPSIASKVLAEFSRMSGPAAVKKAPVQLREPLSQREEQVLVWLSRGCSNKEIASHLD 185 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 ++E TVK H+ N+ K+ V +RTQA A D Sbjct: 186 LAEGTVKNHVSNVLGKLGVLDRTQAALMARD 216 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 46/206 (22%), Positives = 84/206 (40%), Gaps = 6/206 (2%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSL--DDISSGSIILLDMMEADKKL 67 LL++ + L + + + G+ + ++L S ++L+D+ Sbjct: 13 RLLIVDDHPIVRDGLRGVFDGEDGFEVVGEASDGAQALVRAAESGPDVVLMDLRMPTMGG 72 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + L + +++L+L T + G +E ++ ++ G Sbjct: 73 VEAIRR-LRVEQPAVRVLVLTTYDTESDVLPAIEAGATGYLLKDAPREDLIRAVRAAAAG 131 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESA-LLTHREKEILNKLRIGASNNEIARSLFISENT 186 + +A L+T LT RE E+L + G +N E AR LFISE T Sbjct: 132 QPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKLFISEAT 191 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWAND 212 VKTHL + + K V++R AV+ A Sbjct: 192 VKTHLLHAYAKFGVRDRAAAVAEAYK 217 >UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides sp. JS614 RepID=A1SGL7_NOCSJ Length = 213 Score = 187 bits (476), Expect = 2e-46, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 8/207 (3%) Query: 13 LLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRS--LDDISSGSIILLDMMEADKKLI 68 +L++ L L L + + + G+ + L ++ ++LLD+ + I Sbjct: 1 MLVVDDQELFRRGLTMLLGTEAGIEVVGEAGDGVEGTNLAATAAPDVVLLDIRMPKRSGI 60 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 + + KI++L ++ +G E V ++ V G+ Sbjct: 61 EACL-AIKEAVPSAKIIMLTVSDEEADLYEAVKSGASGYLLKDSSIEEVAQAVRVVADGQ 119 Query: 129 CYFTQKLASYLI---THSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 + +A LI + LT RE E+L + G +N EIA+ LFISEN Sbjct: 120 SLISPSMAVKLIDEFKQMSRPERDHVPGLRLTERELEVLRLVAKGMNNREIAKELFISEN 179 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWAND 212 TVK H+ N+ +K+ + +R +AV +A Sbjct: 180 TVKNHVRNILEKLQLHSRMEAVMYAVK 206 >UniRef50_A5V148 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=A5V148_ROSS1 Length = 216 Score = 187 bits (475), Expect = 3e-46, Method: Composition-based stats. Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 6/206 (2%) Query: 12 TLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSL--DDISSGSIILLDMMEADKKL 67 ++L++ +L Q + L++S+ + G+ + + IIL+D+ Sbjct: 7 SILIVEDQTLMRQGLRTILDLEESIRVVGEARDGAEGVREALRLRPDIILMDVQMPVMNG 66 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + ++ + +I++L T + Y G E ++ ++ V G Sbjct: 67 VEAIRAIIAA-WSQARIIVLTTFDRDDYVFQSVRAGAMGYLLKDAPAEALLQTIRRVHAG 125 Query: 128 ECYFTQKLASYLITHSG-NYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 E + ++AS + + R T L+ RE+E+L L G SN EIA L I+E T Sbjct: 126 EVFIQPEIASRTLREAATGRRRAGTIPFDLSEREREVLVLLAQGLSNREIAGRLSITEGT 185 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWAND 212 VK H+ N+ K+ +NRTQA + A Sbjct: 186 VKNHVSNILAKLQAENRTQAANIARR 211 >UniRef50_C5C7H0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=9 Tax=Bacteria RepID=C5C7H0_MICLC Length = 230 Score = 186 bits (473), Expect = 4e-46, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 92/216 (42%), Gaps = 16/216 (7%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 + L+ +L + L + + L + + + + ++ +S ++L+D+ + Sbjct: 10 RVALVDDQALIRSGLAMLVDSQPDLTVVAEAGSGREAVASVSVAGADVVLMDVRMPEMDG 69 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + L R+ + ++++L T + Y +G E ++ ++ V RG Sbjct: 70 IEATRALL-RRPDAPRVVVLTTFDLDEYAFDAIEAGASGFLLKDAPPEELLAAIRTVHRG 128 Query: 128 ECYFTQKLASYLITHSGNY-----------RYNSTESALLTHREKEILNKLRIGASNNEI 176 + L+TH A LT RE+E+L + GA+N EI Sbjct: 129 DAVIAPSTTRRLLTHMAPRLRSDQVRSAECEEQQAAVASLTPREREVLVLMAQGAANLEI 188 Query: 177 ARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 A L +SE TVKTH+ + K+ ++R QAV A+ Sbjct: 189 AAELVLSEATVKTHVGRVLAKLGARDRVQAVLIAHR 224 >UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY5_SYMTH Length = 218 Score = 185 bits (471), Expect = 7e-46, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 95/207 (45%), Gaps = 7/207 (3%) Query: 12 TLLLITKSSLQATALLQHL-KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKLI 68 +L++ + +L L L + G+ N Q +L+ + ++L+D+ + Sbjct: 2 KVLIVDDHLMLRKGVLSVLSNTDLEVIGEASNGQEALELVPKLKPDLVLMDINMPVLDGV 61 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 + L + ++K+++L E +G E +V+ L+ + GE Sbjct: 62 EATR-KLKQMYPDLKVVILTVSEIDKDLFEAIKAGADGYLLKNLGPEELVSSLRAAISGE 120 Query: 129 CYFTQKLASYLITHSGNYRYNST---ESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 + +A+ ++ R N+T L+ RE E+L G + EIA L+++E+ Sbjct: 121 APISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTGLTYKEIAAKLYVAES 180 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWAND 212 TVK H+ ++ +K+ ++NR++AV +A Sbjct: 181 TVKNHMRHILEKLHLRNRSEAVGYAIR 207 >UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG8_SYMTH Length = 197 Score = 185 bits (471), Expect = 7e-46, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 80/188 (42%), Gaps = 7/188 (3%) Query: 31 KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLN 88 + L + G+ + +++ ++++D+ D I + + +++ L Sbjct: 5 EPDLELVGEAGRGEEAVELTKALKPDVVIMDISLPDMSGIEATR-LIKEAVPETRVIGLT 63 Query: 89 TPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLI----THSG 144 E+ P+ + +V ++ V+ G+ + ++ + G Sbjct: 64 MHEEEPFVLEFLRAGADAYIVKRSAAADLVGAIRAVMEGQAVLDPAVTRAVVEGYVSRPG 123 Query: 145 NYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRT 204 E LT RE+EIL + G +N EIAR L+ISE TV+TH N+ K+ + +RT Sbjct: 124 RAVGQPEEPCPLTPREREILVLIAEGLTNAEIARRLYISEKTVQTHRSNMLDKLGIHDRT 183 Query: 205 QAVSWAND 212 + V +A Sbjct: 184 ELVRYAIR 191 >UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD Length = 220 Score = 185 bits (471), Expect = 7e-46, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 92/208 (44%), Gaps = 5/208 (2%) Query: 9 HGHTLLLITKSSLQATALLQHLKQ-SLAITGKLHNIQRSLDDIS--SGSIILLDMMEADK 65 +L+ + L L+ + + G+ + +++ + ++++D+ Sbjct: 8 EAIRVLITDDHPVFRQGLRGLLEALGVEVVGEAESGPQAVQLAAELQPDVVVMDLHMPGG 67 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 I + T++R + I +L+L D G E + ++ V Sbjct: 68 NGIEATR-TITRTSPRIGVLVLTMFRDDDSVFAAMRAGARGYLLKESGAEEIARAVRAVA 126 Query: 126 RGECYFTQKLASYLITHSGN-YRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISE 184 GE + ++A ++T+ + T LT RE+E+L + G SN EIA++LF+S Sbjct: 127 AGEAIYGPEIARRVLTYFADMPDPKQTAFPELTEREREVLQLIAQGRSNGEIAQTLFLSP 186 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWAND 212 TV+ H+ N+F K+ V +R QA+ A + Sbjct: 187 KTVRNHVSNIFMKLHVADRAQAIVLARE 214 >UniRef50_C1TL62 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL62_9BACT Length = 217 Score = 185 bits (471), Expect = 8e-46, Method: Composition-based stats. Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 5/205 (2%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADKKL 67 ++LI L + L ++ ++ G+ + L I S ++LLD+ + Sbjct: 5 RMVLIDDHKLFRDGMKKLLEMEPDFSLEGEASDGIEGLALIKRSRPDVVLLDIGMPNLDG 64 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I ++ L N K + + D + ++G + +++ ++ V RG Sbjct: 65 IGLIRE-LRSTEQNTKFVAITAFNDERKLSELSSVGVHGFVLKSSGRTELLSAIRSVARG 123 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 +CY K+A L+ + + LT REKE+L L G SN EI+ + +SE TV Sbjct: 124 QCYVDPKVAGLLLGAFHKKQDEADMLCDLTDREKEVLFWLAQGLSNLEISAKMNLSEKTV 183 Query: 188 KTHLYNLFKKIAVKNRTQAVSWAND 212 K H+ ++ KK+ +++RTQA A Sbjct: 184 KNHVSHILKKLDLRDRTQAAILAWR 208 >UniRef50_A3Y699 Putative two component system response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y699_9GAMM Length = 226 Score = 185 bits (470), Expect = 8e-46, Method: Composition-based stats. Identities = 52/210 (24%), Positives = 95/210 (45%), Gaps = 8/210 (3%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 ++++ +L + L L + + + + N +++ +IL+D+ + Sbjct: 4 RIVIVDDQALVRSGLSMILDHQSDIEVVAECANGLEAIEAAKKYIPDLILMDIRMPEMDG 63 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + L N +I++L+T + Y +G + +V + V +G Sbjct: 64 LSATSAILGDLNIQTRIVILSTFDLDEYIYRALREGASGFILKDTPPDELVAAVHVVAQG 123 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESA----LLTHREKEILNKLRIGASNNEIARSLFIS 183 T + LI + + T LT REKEIL L +G +N+EIA LFI Sbjct: 124 GALLTPSITKKLIGAFAELKPSHTNVTGHIDRLTTREKEILKNLALGFNNSEIASRLFIG 183 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 E+TVKTH+ +L K+ +++R QAV +A +N Sbjct: 184 ESTVKTHVSSLLSKLELRDRAQAVIFAYEN 213 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 185 bits (470), Expect = 9e-46, Method: Composition-based stats. Identities = 44/205 (21%), Positives = 87/205 (42%), Gaps = 5/205 (2%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 +L++ + L+ L+ + L + G+ + +++ ++L+D+ Sbjct: 3 RILVVDDHPVVREGLVAILEAQEDLTVVGEAGDGDQAVQQYRDLKPDVVLMDLAMPGTDG 62 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + Q+ + R + N ++++L + +G +E + ++ V RG Sbjct: 63 VQAIQE-IKRIDPNARVVVLTAYDTDERILQAVQAGASGYLLKGAPREDIFRAVRVVYRG 121 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 +A L+ G+ LT RE ++L + G N EIA L I+E TV Sbjct: 122 GSLLEPVVAGKLLNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSITERTV 181 Query: 188 KTHLYNLFKKIAVKNRTQAVSWAND 212 K H +++K+ V RT+AVS A Sbjct: 182 KFHANAIYRKLDVSGRTEAVSKAIQ 206 >UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes RepID=LIAR_BACSU Length = 211 Score = 185 bits (470), Expect = 1e-45, Method: Composition-based stats. Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 5/206 (2%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRS--LDDISSGSIILLDMMEADKKL 67 +LLI + L L+ + + G+ + L S +IL+D++ Sbjct: 3 RVLLIDDHEMVRMGLAAFLEAQPDIEVIGEASDGSEGVRLAVELSPDVILMDLVMEGMDG 62 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + R+ ++ KI++L + D + + ++ +G Sbjct: 63 IEATKQ-ICRELSDPKIIVLTSFIDDDKVYPVIEAGALSYLLKTSKAAEIADAIRAASKG 121 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 E K+A +++ + N+ LT RE EIL + G +N EI LFI+ TV Sbjct: 122 EPKLESKVAGKVLSRLRHSGENALPHESLTKRELEILCLIAEGKTNKEIGEELFITIKTV 181 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDN 213 KTH+ N+ K+ V +RTQA +A+ N Sbjct: 182 KTHITNILSKLDVSDRTQAAVYAHRN 207 >UniRef50_B0C756 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C756_ACAM1 Length = 224 Score = 185 bits (470), Expect = 1e-45, Method: Composition-based stats. Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 6/206 (2%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 +LL+ + L + + I G+ + + ++ +IL+D+ Sbjct: 9 RVLLVDDEDIVRYGLKAIAQGTPEIEIVGEAGSGKAAIAQAKTLQPDVILMDINMPQMDG 68 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + Q+ +SR + K+L+L T ++ Y G E + +Q +G Sbjct: 69 VTATQE-ISRIQPHAKVLILTTHDEAEYLVEAMQQGAVGYLLKNTPPEDFIQSIQQAHKG 127 Query: 128 ECYFTQKLASYLITHSGNY-RYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 L L R +T RE+++L + GASN EI+ +L I+E T Sbjct: 128 YLQLGPGLGQKLCQLLKTPVRPQIEAFEGITPREQDVLKLVATGASNREISETLHITEKT 187 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWAND 212 VK H+ ++ ++ V++RTQ WAN Sbjct: 188 VKNHVSSILSRVGVQSRTQLAIWANS 213 >UniRef50_C0WKL5 Response regulator n=6 Tax=Corynebacterium RepID=C0WKL5_9CORY Length = 253 Score = 185 bits (470), Expect = 1e-45, Method: Composition-based stats. Identities = 49/240 (20%), Positives = 97/240 (40%), Gaps = 28/240 (11%) Query: 1 MFNEVHSIHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISSG--SII 56 M N + L+ L + ++ +++ + + LD II Sbjct: 1 MSNPEQESEPIRIALVDDQPLLRAGFAMLIGSQEDMSVVWQASDGDEVLDLARQEPVDII 60 Query: 57 LLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQER 116 L+D+ A I ++ L + + K+++L T +D+ + +G + E Sbjct: 61 LMDVQMARVNGIAATEEVLP-EFPDTKVIMLTTFDDHNFVHGAISAGASGFLLKDVEPEE 119 Query: 117 VVNGLQGVLRGECYFTQKLASYLITH-----------------------SGNYRYNSTES 153 +++ ++ V GE + ++ + ++ G + S Sbjct: 120 LLSAIRTVHSGEAVLSPRITAQVLQQVRSEEGGDSRKAHSASHTAAAAQPGATTATAPPS 179 Query: 154 ALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 A LT RE +IL + +G SN EI+ F+S TVKTH+ ++ K ++R QAV +A + Sbjct: 180 AELTPREMDILRLMALGYSNTEISEEEFVSMATVKTHVRHVLTKTGSRDRVQAVLYAYTH 239 >UniRef50_D1C1C8 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1C1C8_SPHTD Length = 237 Score = 185 bits (469), Expect = 1e-45, Method: Composition-based stats. Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 7/208 (3%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRS--LDDISSGSIILLDMMEADKKL 67 ++LL+ L AL L + + + G+ + + + L + +IL+D+ Sbjct: 24 SVLLVDDHVLFRQALRHLLEAEPDIRVIGEAGDGRSAQQLAERFHPDVILMDISMPGVDG 83 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + +D L N KI++L + + + + +V++ ++ V RG Sbjct: 84 VTATRD-LKAGIPNTKIIILTMFAEDGHVIRAIRAGADAYLLKNSESSKVIDAIRAVARG 142 Query: 128 ECYFTQKLASYLITHSGNYR--YNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 E +LA+ L+ A LT RE ++L + G SN EIA L ++E+ Sbjct: 143 ESVIEPQLATKLLNEFRRISEFREEETVAGLTEREIQLLRLVASGMSNKEIAAELSLAES 202 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWANDN 213 TVK L LF+K+ VK+RTQA +A + Sbjct: 203 TVKNRLSLLFEKLDVKDRTQAAIYALSH 230 >UniRef50_D1CF52 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=D1CF52_THET1 Length = 1648 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 52/214 (24%), Positives = 100/214 (46%), Gaps = 6/214 (2%) Query: 4 EVHSIHGHTLLLITKSSLQATALLQHLK-QSLAITGKLHNIQRSLDDI--SSGSIILLDM 60 ++ + G +++ +L + L+ + + G+ N Q +++ + S ++L+D+ Sbjct: 1432 DMTNKTGLRVVIADDHALFRDGIKSLLESEGFQMVGEASNGQEAVELVHNLSPDLVLMDL 1491 Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 + + +S ++K+++L E+ G + E Sbjct: 1492 SMPVMGGLDAIR-LISADKPSVKVIVLTASEEDKDLFEAIKAGAQGFIPKNLESEEFFQL 1550 Query: 121 LQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIG-ASNNEIARS 179 L+ V+RGE T +LA LI S+ +LT RE+EIL L G S +++R Sbjct: 1551 LRNVIRGEPAITPRLAGKLIDEFSRP-VRSSSLQMLTDREQEILQLLVNGVTSTKDLSRQ 1609 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 L +SE+TVK HL N+ K+ +++R Q V+WA + Sbjct: 1610 LGVSEHTVKYHLRNILSKLHLQSRAQVVAWAVQH 1643 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 8/205 (3%) Query: 13 LLLITKSS--LQATALLQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKLI 68 + L+ LQ + ++ + I G N ++++ +I+ + ++D+ I Sbjct: 4 VYLVDDHPFVLQGLKAYLNTREGIEIVGTSGNGEKAIKEIAKLNPEVAVVDLRLPGLNGI 63 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 ++ + +KN ++++L++ E++V ++ RGE Sbjct: 64 EVTRE-IKKKNPGTEVIILSSFNKEDEVIEAIDAGALSYVMKDSRPEKLVEAIKAARRGE 122 Query: 129 CYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVK 188 T +A ++ + + LT REKE+L L G SN +IA++L ISE TVK Sbjct: 123 PVLTPGVAKKIMKRAARKGRKTEP---LTPREKEVLACLVRGNSNRDIAKTLCISETTVK 179 Query: 189 THLYNLFKKIAVKNRTQAVSWANDN 213 TH+ N+ KK+ VK+RTQAV A +N Sbjct: 180 THVSNILKKLDVKDRTQAVIKAIEN 204 >UniRef50_D1BX47 Two component transcriptional regulator, LuxR family n=14 Tax=Actinomycetales RepID=D1BX47_XYLCX Length = 234 Score = 184 bits (467), Expect = 2e-45, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 84/217 (38%), Gaps = 17/217 (7%) Query: 12 TLLLITKSSLQATA--LLQHLKQSLAITGKLHNIQRSLDDISS----GSIILLDMMEADK 65 + L+ + ++ + + + + + +L + + ++L+D+ Sbjct: 11 RVALVDDQQMVRAGFRMVIDSQPDMTVVAEAGDGVEALRVLGALPVRADVVLMDVRMPRM 70 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 + L+ + ++++L T + Y +G E ++ ++ V Sbjct: 71 DGLTATA-ALTSGADAPRVVVLTTFDIDEYVLEAIRSGASGFMLKDAPPEEMLGAIRTVH 129 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTES----------ALLTHREKEILNKLRIGASNNE 175 G+ L+ H A LT RE+E+L + G SN E Sbjct: 130 AGDAVIAPSSTRRLLEHLVTALPTPAPDTPPSPAHAALATLTDREREVLELMARGRSNTE 189 Query: 176 IARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 IA LF++E TVKTH+ + K+ ++R QAV A + Sbjct: 190 IAADLFVAEATVKTHVGRILAKLDARDRVQAVVLAYE 226 >UniRef50_C1RMQ2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1RMQ2_9CELL Length = 254 Score = 184 bits (467), Expect = 2e-45, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 86/218 (39%), Gaps = 8/218 (3%) Query: 4 EVHSIHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSL--DDISSGSIILLD 59 + H T+L++ L + L + + + G+ H+ ++ + L+D Sbjct: 3 DGHPRSATTVLVVDDQPLIRQGIRAVLRGQPGVEVVGEAHDGHSAVRTARRLRPDVTLMD 62 Query: 60 MMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVN 119 + + + + + +++L + + G+ +V Sbjct: 63 VQMPGMDGVEATRVICADDDPPTSVVVLTMYDQDEHVFEALRAGARGLVLKDAPTSELVA 122 Query: 120 GLQGVLRGECYFTQKLASYLITHSGNYR----YNSTESALLTHREKEILNKLRIGASNNE 175 + G+ + + LI + A LT RE+++ L G S E Sbjct: 123 AIHAAAAGDSLLSPSVTRRLIEEFARRPTVRMEATDGPAELTARERDVFRLLVQGLSTAE 182 Query: 176 IARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 A L + ++TVK+H+ +L++K+ V++R QAV +A ++ Sbjct: 183 AAERLTLGDSTVKSHVQSLYRKLGVRDRVQAVIYAYEH 220 >UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia (class) RepID=B9L2G4_THERP Length = 246 Score = 184 bits (467), Expect = 2e-45, Method: Composition-based stats. Identities = 46/207 (22%), Positives = 89/207 (42%), Gaps = 6/207 (2%) Query: 12 TLLLITKSSLQATALLQHLKQS--LAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 +L++ L L Q ++ + + G+ N Q +L ++ ++L+D+ Sbjct: 29 RVLIVDDHDLFREGLRQLIETDPAIEVVGEAANGQDALKMVAELQPDVVLMDINMPGMDG 88 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + ++ ++ +L+L +D Y E ++ + G Sbjct: 89 IRAT-EAIVQQYRHVHVLMLTMYDDEEYVLHAIRAGARSYLVKNSKPEELLRAIHVAAEG 147 Query: 128 ECYFTQKLASYLITHSGNY-RYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 LA L+ T L+ RE +L L G +N +IA +L ++E+T Sbjct: 148 GATIDPDLAPILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQIADALNLAEST 207 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDN 213 VK +L LF+K+ V++RTQAV +A + Sbjct: 208 VKNNLSALFQKLGVRDRTQAVIYAISH 234 >UniRef50_B2A6W2 Two component transcriptional regulator, LuxR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W2_NATTJ Length = 215 Score = 183 bits (466), Expect = 2e-45, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 102/208 (49%), Gaps = 8/208 (3%) Query: 12 TLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 ++L++ ++ + ++L + + + + G++ + +LD ++LLD+ DK+ Sbjct: 4 SVLVVDDHAVLGKGLSMLLNSQDDMEVCGQVGTAKEALDTCKEKCPDVVLLDLSLPDKQG 63 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 ++ +++ + ++L L ED Y +G + +++ ++ V +G Sbjct: 64 HEIIKEL--KESCSARVLALTMHEDEAYFKRVVEAGGDGYILKKAADDELISAIRSVYQG 121 Query: 128 ECYFTQKLASYLITHSGNYRYNS--TESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 E + LI + N S ++ L+ REKE+L + +G +N EIA L+IS Sbjct: 122 EVIVDKTFTKLLIDYYRNPDKQSGTEKNYDLSDREKEVLQLIALGYTNKEIAEKLYISIK 181 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWANDN 213 TV+TH+ + +K+ + R++ V +A N Sbjct: 182 TVETHIARIKEKLGLNRRSELVRYAMRN 209 >UniRef50_D1BGN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=4 Tax=Actinomycetales RepID=D1BGN7_SANKS Length = 258 Score = 183 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 93/212 (43%), Gaps = 10/212 (4%) Query: 12 TLLLITKSSLQAT--ALLQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 +LL+ L + A++ + L + G+ + ++ + S ++L+D+ + Sbjct: 35 RVLLVDDQELFRSGIAVIVDAQDGLEVVGQAADGSEAVRMVDDLSPDVVLMDVRMPELDG 94 Query: 68 IHYWQDTLS-----RKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 + + + + +++++L T + +G + + ++ Sbjct: 95 VEATRQIFAPARAASRAGPVRVIVLTTFDLDDRAAAAIRYGASGFLLKDATPAMLRDAIR 154 Query: 123 GVLRGECYFTQK-LASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLF 181 V G L++ L R + LT +E+E+L + G +N EIAR F Sbjct: 155 TVHAGNAVLAPDDLSTLLDGRFRARRPSPPGLEDLTPKEREVLAAVAAGLNNAEIARRAF 214 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 +SE+TVKTH+ + +K+ +++R Q V A+++ Sbjct: 215 VSESTVKTHVGAVLRKLGLRDRVQVVVLAHEH 246 >UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacillus RepID=C3BET8_9BACI Length = 216 Score = 183 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 47/210 (22%), Positives = 92/210 (43%), Gaps = 12/210 (5%) Query: 14 LLITKSSLQ--ATALLQHLKQSLAITGKLHNIQRSL--DDISSGSIILLDMMEADKKLIH 69 +++ SL A+L +L+ L + G ++ + + IIL+D+ + Sbjct: 1 MIVDDQSLIRDGLAMLLNLRSELEVVGTANDGDEVVRIAEQLQPEIILMDIRMPRINGVE 60 Query: 70 YWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGEC 129 + + + ++K+L+L T D +G + + +V + V G Sbjct: 61 GTR-LIRERFPDMKVLMLTTFNDSELIFEALEQGASGYLLKDMETDAIVQAILTVHAGGA 119 Query: 130 YFTQKLASYLITHSGNYR-------YNSTESALLTHREKEILNKLRIGASNNEIARSLFI 182 Q + + ++ + + LT RE ++L ++ +G +N EIA LFI Sbjct: 120 VLPQDITAQIVKELKRTKVVEISGQNQPKQVEQLTEREIDVLREIGLGLNNKEIAEKLFI 179 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 +E TVK H+ NL K+ +++RTQA +A Sbjct: 180 TEGTVKNHVSNLISKLELRDRTQAAIYAVR 209 >UniRef50_P55184 Uncharacterized transcriptional regulatory protein yxjL n=1 Tax=Bacillus subtilis RepID=YXJL_BACSU Length = 218 Score = 183 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 8/209 (3%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQR--SLDDISSGSIILLDMMEADKKL 67 + L L + + + + ++G+ + +L + +IL+D+ Sbjct: 7 RVALADDQPLVREGFRYVINAQTDMTVSGEAGDGHDIIALAKQTKPDVILMDVQMPRCSG 66 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I +D +S N KI++L T + Y G E +++ ++ RG Sbjct: 67 IEAAKDIMSAL-PNTKIVILTTFDTEEYVFEGIRAGAVGYLLKDTLPEELIDAIRAAARG 125 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESAL---LTHREKEILNKLRIGASNNEIARSLFISE 184 E F A+ +I+ + + + L T RE E+L ++ G N +IA LF+SE Sbjct: 126 EAIFRTVTAAKIISETFRAKQQTHAEELAEPFTKRELEVLQQMAYGLRNEDIAEKLFVSE 185 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 +TVKTH++ + +K ++RTQAV +A N Sbjct: 186 STVKTHVHRILQKCNAQDRTQAVVFAIRN 214 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 183 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 7/207 (3%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISSG--SIILLDMMEADKKL 67 +L++ L L L + + + G+ N +LD ++ ++++D+ Sbjct: 15 RVLIVDDHELARAGLAAVLACEPGIEVVGEADNGAAALDFVARHPVDLVMMDLQMPVIDG 74 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + + I I+++ + G + ++ ++ VLRG Sbjct: 75 IEATRR-IKALHPAIGIIMVTVQAKPDALMEALRAGVAGYLLKDASRREIIGAVRQVLRG 133 Query: 128 ECYFTQKLASYLITH--SGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 E + L + ++T LT RE+++L L G +N EIAR L IS Sbjct: 134 EAFLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNREIARELIISPG 193 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWAND 212 TVK H+ ++ K+ V +RTQA A + Sbjct: 194 TVKVHVEHIIAKLGVSDRTQAAVRALE 220 >UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3 Tax=Bacillus RepID=YHCZ_BACSU Length = 214 Score = 183 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 7/206 (3%) Query: 12 TLLLITKSSLQATALLQH--LKQSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADKKL 67 +++ + L + + + G+ +L I + ++L+D+ + Sbjct: 2 KIVIADDHHVVRKGLRFFFATQDDIEVVGEAATGLEALRVIEETKPDLVLMDLSMPEMDG 61 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + ++ + I++L + D + + E +V + V G Sbjct: 62 IQAIKKAI-QQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKT-RQVHGG 119 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESA-LLTHREKEILNKLRIGASNNEIARSLFISENT 186 E + + +++TH N E LT REK++L ++ G SN EIA +LFISE T Sbjct: 120 EYKLSTAIMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALFISEKT 179 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWAND 212 VKTH+ NL K+ V +RTQA +A Sbjct: 180 VKTHVSNLLAKLEVADRTQAALFAVK 205 >UniRef50_C6BTX3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX3_DESAD Length = 217 Score = 183 bits (465), Expect = 4e-45, Method: Composition-based stats. Identities = 46/207 (22%), Positives = 86/207 (41%), Gaps = 7/207 (3%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 +LL+ + + L + + G+ N Q +++ + S IIL+DM+ Sbjct: 6 KVLLVDDHDIVRIGVRSFLGSFDDIKVVGEAANGQEAVEMTAELSPDIILMDMLMPVMDG 65 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I ++ RK +I+ L + G + ++ ++ V RG Sbjct: 66 IQAIREIRDRKLPG-RIIALTSFATDDKLFPAIKAGAMGYLLKDSTPDELLEAIRRVHRG 124 Query: 128 ECYFTQKLASYLITHSGNYRYNS--TESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 E +A +++ +S LT RE + L + G SN IA +F+SE Sbjct: 125 EPSLAPDIARKVLSELSQPGEDSETPTPDPLTPRELDTLKLVAKGKSNKAIAEEMFVSEA 184 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWAND 212 TV+TH+ ++ K+ + NR +A +A Sbjct: 185 TVRTHMTSILSKLHLANRVEATLYALR 211 >UniRef50_A0RGC1 DNA-binding response regulator n=12 Tax=Bacillales RepID=A0RGC1_BACAH Length = 597 Score = 183 bits (465), Expect = 4e-45, Method: Composition-based stats. Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 14/216 (6%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 LL++ +L +L Q L+ + GK ++ +L I+L+D+ + Sbjct: 382 RLLVVDDQALITNSLEQILENQTDFIVVGKAYDGSEALILCEQLQPDIVLMDIQMPEMNG 441 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + R+ N+KI+L+ T ED G + + L+ + G Sbjct: 442 IEALLE-MKRRWPNMKIVLMTTFEDSLQAATALEHGAEGYMLKSIHPQEMKEALKLIYNG 500 Query: 128 ECYFTQKLASYLITHSGNYRYNSTE--------SALLTHREKEILNKLRIGASNNEIARS 179 + Q +A+ + R + LT RE EIL L G IA Sbjct: 501 GTWIDQSVATRIFEEMKLQREQLAKIKSTKQTFPYGLTKREMEILEHLSNGLRYKSIAAK 560 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWAN-DNL 214 LF+SE T++ + NL+ K+ V NR +A+ A +N+ Sbjct: 561 LFLSEGTIRNYCSNLYSKLGVSNREEAIKMARTENI 596 >UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Actinobacteria (class) RepID=D2AX12_STRRD Length = 239 Score = 183 bits (465), Expect = 4e-45, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 9/209 (4%) Query: 12 TLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRS--LDDISSGSIILLDMMEADKKL 67 +L++ L + +L+ S + G+ N ++ L ++++D+ Sbjct: 12 RVLIVDDQPLVRRGLSLILSPDPSFEVVGEAENGAQAVTLARRLRPDVVVMDIRMPVLDG 71 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + ++ L+ + ++L L+T + Y G E + ++ V G Sbjct: 72 VGATRE-LAATVPDCRVLALSTFDLDEYVVGALRAGAYGFLPKDSSPEDLSAAIRTVHAG 130 Query: 128 ECYFTQKLASYLITHSGNY----RYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 E +L + LI+ R T LT RE E+ + G N I+R+L IS Sbjct: 131 EAAVAPRLLTRLISTYVRAPHGTRPTPTGLGELTPREVEVWRLMATGLDNTGISRTLDIS 190 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 +TVK ++ ++F K+AV++R QAV A + Sbjct: 191 LSTVKNYITSIFDKLAVRDRAQAVIVAYE 219 >UniRef50_C0GJ72 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ72_9FIRM Length = 212 Score = 183 bits (464), Expect = 4e-45, Method: Composition-based stats. Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 7/208 (3%) Query: 10 GHTLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADK 65 ++L+ S+ Q LL L ++ + G+ + ++ + + +ILLD D Sbjct: 4 NIKVMLVDDHSVVRQGLRLLLELDDTMEVCGEAETLTGAVAVCAEVAPDVILLDFKLPDG 63 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 I + L R+ +KI++L D +G + E ++N +Q V Sbjct: 64 DGIIGCGN-LKRQFPQVKIIILTAYADDHLVTETIKAGADGYLLKNVESEELINTIQAVH 122 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 +G+ + L + + + + LT +E +IL+ + +G +N EIA + IS+ Sbjct: 123 KGQSVLDPSVTEILFDNIKSQQPKKEHN--LTPKEVQILDMISVGKANKEIAEIMKISDK 180 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWANDN 213 TV+ ++ N+ +K+ V NRT+A S+ N Sbjct: 181 TVRNYVSNILQKLNVSNRTEAASYWMRN 208 >UniRef50_D1B9T1 Two component transcriptional regulator, LuxR family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9T1_THEAS Length = 227 Score = 183 bits (464), Expect = 5e-45, Method: Composition-based stats. Identities = 47/205 (22%), Positives = 93/205 (45%), Gaps = 5/205 (2%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 ++L L L L +++ + + G+ + +++ +S ++L D+ K Sbjct: 5 RIVLADDHRLFRDGLRRLLEMEKDMEVIGEAEDGDATVEMVSALKPDVLLFDIHMPKKDG 64 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I +D L + + + + +D + + I+ +++ ++ V RG Sbjct: 65 IQVVKD-LKAMGCSPRFVAITAFDDDDHITALSSVGIDAYVLKASGMAELLSAIRSVYRG 123 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 Y K+A L++ R + LT RE E+L + G +N EIAR + +SE TV Sbjct: 124 HSYVDPKVAGKLLSTFNRRREERDLLSRLTPREMEVLYWISQGLNNGEIARKMVLSEKTV 183 Query: 188 KTHLYNLFKKIAVKNRTQAVSWAND 212 K H+ ++ KK+ + +RTQA +A Sbjct: 184 KNHVSHILKKLDLVDRTQAAVFAWK 208 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 182 bits (463), Expect = 6e-45, Method: Composition-based stats. Identities = 50/209 (23%), Positives = 90/209 (43%), Gaps = 10/209 (4%) Query: 12 TLLLITKSSLQATALLQHLKQS--LAITGKLHNIQRSLDDIS------SGSIILLDMMEA 63 ++++ + L +L Q + + + + +++ + IIL+D+M Sbjct: 14 KVMIVDDHDMVRMGLKTYLMQDPGFEVIAEAGDGREAVELLERGLREGQPDIILMDLMMP 73 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 ++ SR ++KI++L + + E ++ LQG Sbjct: 74 GMNGAEATKEVRSR-FPDMKIVILTSFLEDDLVVQAVEAGAVSYVLKTVSAEELIYALQG 132 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 RG T ++A L T R + + +T REKE+L + G SN +IA L IS Sbjct: 133 AYRGMPVMTGEVAQAL-TRGLRQRTVQGDDSGMTEREKEVLLLIAEGKSNKDIAEELHIS 191 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 TVKTH+ NL K +++RTQ +A+ Sbjct: 192 IKTVKTHVSNLLMKCELEDRTQLAIYAHR 220 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 182 bits (463), Expect = 6e-45, Method: Composition-based stats. Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 9/209 (4%) Query: 12 TLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +LL +L Q L + + + G+ N ++ ++L+D+ A Sbjct: 5 KILLTDDHTLFRQGVRTLLAAEADMEVAGEAANAMDAVALAQQLRPDVVLMDIGMAGMSS 64 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + ++ +K++ L+ +D Y NG ++++ ++ V RG Sbjct: 65 FEATR-LIRKERPEVKVIFLSMYDDEDYLAECVDMGANGYILKDSPADQLITAIREVQRG 123 Query: 128 ECYFTQKLASYLIT----HSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 Y + +L S L+ S LT RE+EIL L G S EIA +S Sbjct: 124 GSYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIAAFFELS 183 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 TV+ H +NL +K+ + N+ Q V +A Sbjct: 184 VKTVEAHKFNLMRKLDIHNKAQLVQYAIQ 212 >UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Actinomycetales RepID=D2AUN6_STRRD Length = 226 Score = 182 bits (462), Expect = 7e-45, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 89/210 (42%), Gaps = 10/210 (4%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +LL ++ + + + + + + + ++D + S ++LLD+ Sbjct: 3 RVLLADDEAMIRAGVRAILAADPEIEVVAEAGDGREAIDLVLSHRPDVVLLDIRMPRMDG 62 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + L R +++L T + Y G D ++ G+ V G Sbjct: 63 LAAVAE-LRRVAPGTAVVMLTTFGEDDYIARALGEGAGGFLLKSGDPRELLAGIHAVAEG 121 Query: 128 ECYFTQKLASYLITHSGNYR-----YNSTESALLTHREKEILNKLRIGASNNEIARSLFI 182 Y + ++A +IT R + A LT RE+++L + G SN +IAR L++ Sbjct: 122 AAYLSPRVAHRVITQLTGGRMTRVVAAREQVAALTPRERDVLALVGEGLSNGQIARRLYL 181 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 E TVK H+ + ++ +NR QA A++ Sbjct: 182 VEGTVKAHVSAILTRLGARNRVQAAILAHE 211 >UniRef50_C7NKN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=138 Tax=Bacteria RepID=C7NKN7_KYTSD Length = 244 Score = 182 bits (462), Expect = 7e-45, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 87/221 (39%), Gaps = 20/221 (9%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 + L+ SL L + +++ G+ + Q ++D + + ++L+D+ Sbjct: 4 RIFLVDDQSLVRAGFRMVLDAQPDMSVVGEAPDGQSAVDQLKTIAADVVLMDIRMPRLDG 63 Query: 68 IHYWQDTLSR-KNN---NIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 I + L R K+ K+++L T + Y +G E ++ ++ Sbjct: 64 IEATRVLLGRDKHPGGAEPKVVVLTTFDMDEYAYAALEAGASGFLLKDAGPEELLAAIRA 123 Query: 124 VLRGECYFTQKLASYLITHS------------GNYRYNSTESALLTHREKEILNKLRIGA 171 V G+ L+ +LT RE E+ + G Sbjct: 124 VASGDAVVAPSTTKRLLERFVPTLTPEVADVASPAEQQEYLREVLTEREYEVFEAVAAGL 183 Query: 172 SNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 SN EIA+ LF++E T+KTH+ L K+ ++R Q V A + Sbjct: 184 SNTEIAKELFVAEATIKTHIGRLLFKLGCRDRVQLVITAYE 224 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 182 bits (462), Expect = 9e-45, Method: Composition-based stats. Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 9/205 (4%) Query: 12 TLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +L+ L + L L + + + G+ + ++ + ++LLD+ Sbjct: 5 KVLVADDHDLVREGICKLLELYEDIKVVGEAGDGLETVKGVRDHFPDLVLLDLNMPRMGG 64 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + + IK+L+L ++ Y G E + + V++G Sbjct: 65 ITAIK-KIKEISPGIKVLILTIHDEEEYVYEVIRSGAEGYIQKDVKPEELKRAIDKVIKG 123 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 + F + + + E L+ RE+E+L L G SN +IA+ LFISE TV Sbjct: 124 DKVFPRSTENEV----REVVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFISEKTV 179 Query: 188 KTHLYNLFKKIAVKNRTQAVSWAND 212 K H+ N+ +K++V +RTQAV A Sbjct: 180 KNHVSNILRKLSVNDRTQAVIVALK 204 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 182 bits (462), Expect = 9e-45, Method: Composition-based stats. Identities = 48/208 (23%), Positives = 92/208 (44%), Gaps = 8/208 (3%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 L+++ L L+ + G+ + + +++ ++++D+ Sbjct: 12 RLIVVDDHDLIRAGFRLVLEQEPDFEVVGEASSGREAIELCRRLRPDVVVMDLAMPGVDG 71 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + + ++ + +L++ ED Y G RV++ L+ +L G Sbjct: 72 LEATRR-IKEEHPQVAVLVVTALEDPEYMLEALKAGAAGYVLKSSPLPRVISALRRLLSG 130 Query: 128 ECYFTQKLASYLITHSGNYRYNSTE---SALLTHREKEILNKLRIGASNNEIARSLFISE 184 E Q+LA+ LI + LT RE+E+L + G +N EIAR L IS Sbjct: 131 ESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTNPEIARELVISR 190 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWAND 212 T K+H+ N+ +K+ V +RTQAV+ A + Sbjct: 191 GTAKSHVQNIIRKLGVSDRTQAVARAFE 218 >UniRef50_B0C955 Two-component transcriptional regulator, LuxR family n=4 Tax=Cyanobacteria RepID=B0C955_ACAM1 Length = 215 Score = 181 bits (461), Expect = 1e-44, Method: Composition-based stats. Identities = 48/209 (22%), Positives = 93/209 (44%), Gaps = 7/209 (3%) Query: 12 TLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRS--LDDISSGSIILLDMMEADKKL 67 LLL +L Q A L L++ L++ G+ + + + L +IL+D+ Sbjct: 3 RLLLADDQALFRQGLASLLELEEDLSVVGQAQDGRDAILLTQTLQPDVILMDVRMPICDG 62 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + ++ + ++ I+IL+L T ++ Y G ++ ++ + G Sbjct: 63 VEATRE-IHQRFPWIRILVLTTFDEDEYIWTSLQAGALGYLLKSTPASQLAAAIRMLHDG 121 Query: 128 ECYFTQKLASYLITHSGNYRYNSTES--ALLTHREKEILNKLRIGASNNEIARSLFISEN 185 +A +I + ++ L+ RE ++LN + G SN EI++ L ++E Sbjct: 122 HFQLGPTIAPKVIAQLRPPPLKNEQNHLERLSDRELDVLNLIGQGKSNREISQILHLTEG 181 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 TVK ++ L + V++RTQA WA L Sbjct: 182 TVKNYVSQLLGSLGVRDRTQAALWAQQYL 210 >UniRef50_C5C8Q1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Micrococcus luteus NCTC 2665 RepID=C5C8Q1_MICLC Length = 227 Score = 181 bits (460), Expect = 1e-44, Method: Composition-based stats. Identities = 49/212 (23%), Positives = 89/212 (41%), Gaps = 14/212 (6%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +L+ L + AL L + G + N +++ ++ ++L+DM Sbjct: 6 RILIADDQPLMSGALRVLVGSAPGMTCVGVVANGVEAVEACAAIEPDVVLMDMQMPLMDG 65 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + + + I++L + T Y G + ++ +Q V RG Sbjct: 66 VEATRR-IKDTHPAIRVLAITTFTSEDYLVPALRAGAGGYLLKDAEPPAILGAIQAVHRG 124 Query: 128 ECYFTQKLASYLITHSGNYRYN---------STESALLTHREKEILNKLRIGASNNEIAR 178 E + +A+ L+ R S + + LT RE +L L G SN EIA Sbjct: 125 ESVLSPAVAAKLLASIERDRPTVGPTSVQPGSPDGSDLTERELGVLRLLARGQSNPEIAA 184 Query: 179 SLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 +LF+SE+TVK +L + K+ V++R Q + A Sbjct: 185 NLFVSESTVKANLTRIMAKLEVRDRVQLIIRA 216 >UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD7_9MICO Length = 207 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 93/207 (44%), Gaps = 9/207 (4%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLD--DISSGSIILLDMMEADKKL 67 + L+ L + L L++ G+ + Q ++ D ++ ++L+D+ Sbjct: 3 RVYLVDDHQLVRAGVRTLLESDPGLSVVGEARDGQEAVAGIDAAASDVVLMDLSMPVMDG 62 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + LS + + ++L+L + D G + ++ + RG Sbjct: 63 VEATRAILS-THPDTRVLVLTSFSDRERVKEVLAAGAIGYVLKDAEPADLLAAVHAAARG 121 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 E ++A L+ +G + L+ RE ++L + G +N ++AR+L I+E TV Sbjct: 122 EVPIDPRVAGALLPSAGGPSV----ADRLSPRETQVLRLVAQGLANKQVARALGITERTV 177 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDNL 214 K HL +F++I V +RT A WA D+L Sbjct: 178 KAHLGRVFREIGVLDRTSAALWARDHL 204 >UniRef50_A6TVR4 Two component transcriptional regulator, LuxR family n=5 Tax=Firmicutes RepID=A6TVR4_ALKMQ Length = 208 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 5/202 (2%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 +L++ +L +L L L+ + G N Q + + + +IL+D+ Sbjct: 2 KVLIVDDDALIRDSLKILIDLEADFTVVGTASNGQEAFEFCKEYAPDLILMDIRMPIMDG 61 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + + +I+I++L T +D Y G + + ++ L+ V +G Sbjct: 62 VLATK-MIKESFGSIRIIILTTFKDDQYIKEALKNGAQGYILKSQSADSIIESLRTVSKG 120 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 F ++AS L + + LT RE EI+ + G SN EI+ +L++SE TV Sbjct: 121 NVVFETEIASVLTSMLKEEKEKHHLDLQLTEREHEIIKWVGEGLSNREISAALYLSEGTV 180 Query: 188 KTHLYNLFKKIAVKNRTQAVSW 209 + ++ L +K+ V++RTQ + Sbjct: 181 RNYVTQLLEKLNVRDRTQLAIF 202 >UniRef50_C0Z4M7 Two-component response regulator n=7 Tax=Bacillales RepID=C0Z4M7_BREBN Length = 235 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 51/231 (22%), Positives = 108/231 (46%), Gaps = 21/231 (9%) Query: 2 FNEVHSIHGHTLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLDDISS--GSIIL 57 + ++L+ ++ Q + +++ + ++G+ N + ++ + ++L Sbjct: 1 MENQNKKETIRVVLVDDQTMIRQGLGYVIKMQKDMEVSGEASNGEEAVKIVGEIIPDVVL 60 Query: 58 LDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERV 117 +D+ + I ++ ++R + ++K+L+L T + Y Y G D + + Sbjct: 61 MDVQMPNMSGIDATRE-ITRLHPSVKVLILTTFDTYDYIVDGIRAGAVGYMLKDSDSQDM 119 Query: 118 VNGLQGVLRGECYF-----TQKLASYLITHSGNYRYNSTES-----------ALLTHREK 161 ++ ++ +GE F + LA L NY +S LT RE+ Sbjct: 120 LDLIRRAHQGEALFYTATAAKALAEVLQFQQKNYEPDSDADCDSTLPPLVMFDQLTDRER 179 Query: 162 EILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 ++L +L G N++IA+ L IS TVKTH++ + +K+ V++RTQAV+ A Sbjct: 180 DVLEQLSYGKRNDQIAQHLLISGGTVKTHIHRILQKMGVEDRTQAVAKAIR 230 >UniRef50_A7NP18 Two component transcriptional regulator, LuxR family n=12 Tax=Bacteria RepID=A7NP18_ROSCS Length = 222 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 6/205 (2%) Query: 12 TLLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +LL + L + L++ I G+ + L ++ I+LLD+ + Sbjct: 7 RILLADDHRMFRQGLRELLERKGGFIIVGEASTGREVLAQAAALRPDIVLLDIQMPEIDG 66 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + L++ + ++K+++L + D + +++ ++ V RG Sbjct: 67 VAVARQ-LAQTHPDVKVIMLTMYRQDQHLFEAIKAGARAYLLKDADADELIDVIERVHRG 125 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 E + + + ++ LT RE++IL L G N IA+ LF+SE TV Sbjct: 126 EAALDPTVTLRVFDEFRRLSIDQ-DAEQLTERERDILTLLAEGHDNRTIAQRLFLSEKTV 184 Query: 188 KTHLYNLFKKIAVKNRTQAVSWAND 212 L +F+K+ V NRTQA A Sbjct: 185 GNRLSEIFQKLGVSNRTQAALVAVQ 209 >UniRef50_A9AX03 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AX03_HERA2 Length = 218 Score = 180 bits (458), Expect = 2e-44, Method: Composition-based stats. Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 8/209 (3%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 LL+ ++ L + +L L + N + ++ + +IL+D+ Sbjct: 3 KLLICDDQAVVRDGLSIMLNLAPDLEVIAVASNGREAVQLSATWQPDLILMDLKMPIMNG 62 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + +S +KIL+L T +D + G +V+ ++G + G Sbjct: 63 IEATRQ-ISAAQPLVKILVLTTYDDDEWLFEAIRAGAAGYLLKDMAHSDLVSAIRGTVSG 121 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESAL---LTHREKEILNKLRIGASNNEIARSLFISE 184 + Y + + L++ R S L LT RE +LN + G +N IA L +SE Sbjct: 122 KAYVDPNVTARLLSQVATSRNQPPASQLTGRLTERELAVLNLIATGHTNASIAEQLRLSE 181 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 TV+ H+ + K+ V +RTQA A ++ Sbjct: 182 GTVRNHVSTILSKLDVADRTQAALLAVEH 210 >UniRef50_D0LE76 Response regulator receiver n=2 Tax=Actinomycetales RepID=D0LE76_GORB4 Length = 228 Score = 180 bits (458), Expect = 2e-44, Method: Composition-based stats. Identities = 46/207 (22%), Positives = 90/207 (43%), Gaps = 6/207 (2%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 +LL+ L T L + L+ I G+ + ++ S ++++D+ + Sbjct: 15 RVLLVDDQELIRTGLRRILRVRDGFHIVGECADGSEVPAAVAEHSPDVVVMDLRMRNVDG 74 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I L+ N+ +L+L T +D G E ++ ++ V+R Sbjct: 75 ITATS-MLAALNDPPPVLVLTTFDDDKLLSGALRAGAAGFILKDSPAESLIWAVRAVVRD 133 Query: 128 ECYFTQKLASYLITHSGNYRY-NSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 + + ++T + LT RE ++L + G +N EIA L ISE T Sbjct: 134 GAFLDPAVTGRVLTGYRRSTTGDIATPDELTERETDVLRLVARGRTNAEIAAGLGISEVT 193 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDN 213 VK+H+ ++F K+ +++R A+ +A D+ Sbjct: 194 VKSHINHIFTKLDLRDRAAAIVYAFDH 220 >UniRef50_C6D0G6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=C6D0G6_PAESJ Length = 225 Score = 180 bits (458), Expect = 3e-44, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 90/212 (42%), Gaps = 14/212 (6%) Query: 12 TLLLITKSS--LQATALLQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 +LL L+ + ++ + G+ HN + +++ I+L+D+ Sbjct: 4 KILLADDHQIVLKGISFFLAMQPDFELVGEAHNGKEAVEKAGELQPDIVLMDLNMPIMDG 63 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + ++ +IK+L+L + D + G + +++ ++ +G Sbjct: 64 IEASA-LIKEQHPHIKVLVLTSFADQSHIVPALQTGAIGYMLKDVEPDQLAEAIRSAYKG 122 Query: 128 ECYFTQKLASYLITHSG---------NYRYNSTESALLTHREKEILNKLRIGASNNEIAR 178 ++ L++ + LT RE E+L L G SN +IA+ Sbjct: 123 NIQLHPDISRALLSRPEPEPRPEPVIQHSNRDKSLEALTPRELEVLELLTKGLSNKDIAQ 182 Query: 179 SLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 +L ++E TVKTH+ ++ K+ + +RTQA +A Sbjct: 183 TLIVAEKTVKTHVSSILSKLDLSDRTQAALFA 214 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 180 bits (457), Expect = 3e-44, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 12/209 (5%) Query: 8 IHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEA 63 + G +L+ + L L + + G+ + + L S ++LLD+ Sbjct: 1 MEGIRILVADDHPMLREGLSAVLGTRPGFEVVGEAGDGEEVLRLASGLRPDVVLLDLEMP 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + + L ++ K+++ +D + G + + + ++ Sbjct: 61 GTGGVEVLRR-LRGLDDPPKVVVFTAYDDERLLE-ALREGARGCLLKGASRTEIFDAVRT 118 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 V G ++ + ++ ES LT RE E+L + G +N E+AR+LFIS Sbjct: 119 VHAGGSVIPPEITARVLKEMRG------ESEPLTPRELEVLRLVARGLTNREVARALFIS 172 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 E TVK H+ +L K+ +NRTQAV+ A + Sbjct: 173 ERTVKFHVSSLLAKLRAENRTQAVAIARE 201 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 180 bits (457), Expect = 3e-44, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 6/207 (2%) Query: 12 TLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +L+ + Q L++ + + G+ + + + +ILLD++ Sbjct: 9 RVLIADDHRMVRQGLRTFLELQEGIEVAGEAADGAECAERAAELEPDVILLDLVMPGVDG 68 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + L + ++L++ + D G Y D + ++ V G Sbjct: 69 VGAM-ELLREAGSTARVLVVTSFTDRRMIIPAIRAGARGYVYKDVDPAALAAAVRSVHAG 127 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESAL-LTHREKEILNKLRIGASNNEIARSLFISENT 186 ++A+ L+ N + A LT RE+E+L + G +N EIAR+L ++E T Sbjct: 128 HVLLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIARALVLAEKT 187 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDN 213 VKTH+ N+ K+ V +RTQA WA + Sbjct: 188 VKTHVSNILMKLGVADRTQAALWAVRH 214 >UniRef50_D1C6S1 Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S1_SPHTD Length = 223 Score = 179 bits (456), Expect = 4e-44, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 95/209 (45%), Gaps = 8/209 (3%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +LLL+ +L L L + + G+ + + +++ ++L+D+ Sbjct: 5 SLLLVDDHALFREGLASLLSYQPDFTVVGEAASGEEAVERARELVPDVVLMDIDLPGIDG 64 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + R+ +++++L +D+ G +++ L+G+ RG Sbjct: 65 IEATRR-IKRQLPEVRVVMLTVYDDHERLFQSIKAGAQGYLIKNIRSAELLDQLRGLARG 123 Query: 128 ECYFTQKLASYLITHSGNYRYNST---ESALLTHREKEILNKLRIGASNNEIARSLFISE 184 E ++++A+ ++ + L+ RE E+L + + SN EIA L ISE Sbjct: 124 EAAISRRMAARILEEFARLERQAEILEPDGGLSPREVEVLELVALRLSNKEIAARLSISE 183 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 +TVK HL N+ K+ + +R QA ++A + Sbjct: 184 HTVKNHLKNILAKLQLSSRRQAAAYAVAH 212 >UniRef50_P94439 Uncharacterized transcriptional regulatory protein yfiK n=4 Tax=Bacillales RepID=YFIK_BACSU Length = 220 Score = 179 bits (456), Expect = 4e-44, Method: Composition-based stats. Identities = 48/213 (22%), Positives = 89/213 (41%), Gaps = 13/213 (6%) Query: 12 TLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +++ + + A L L++ L + N Q + + I+L+D+ Sbjct: 3 KIIITDDQDIVREGLASLLQLREELDVIATARNGQEAFEKAKELEPDIVLMDIRMPVSNG 62 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + S ++K+L+L T +D +G + +V + V G Sbjct: 63 VEGTKLITSSL-PSVKVLMLTTFKDSALIAEALEEGASGYLLKDMSADTIVKAVMTVHSG 121 Query: 128 ECYFTQKLASYLITHSGNYRY--------NSTESALLTHREKEILNKLRIGASNNEIARS 179 +L + ++ + E LT RE E+L +L G +N EIA Sbjct: 122 GMVLPPELTAQMLNEWKREKQLKGINEIEKPNELLDLTEREIEVLAELGYGLNNKEIAEK 181 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 L+I+E TVK H+ N+ K+AV++RTQA ++ Sbjct: 182 LYITEGTVKNHVSNIISKLAVRDRTQAAIYSVR 214 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 179 bits (456), Expect = 5e-44, Method: Composition-based stats. Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 8/205 (3%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +L+ ++ + L ++ + + G+ + Q ++D ++ ++L+D++ Sbjct: 5 KVLIADDHAVLREGMSRLLSQEKDIEVVGEAGDGQEAVDMVAQFKPDVVLMDIVMPRLTG 64 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + + + N + IL+L D Y +G + +V ++ + G Sbjct: 65 VEATK-LIKKNNPSTCILILTAYSDIRYILGLLEAGASGYLLKSAKSDEIVGAIRAIKAG 123 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESAL---LTHREKEILNKLRIGASNNEIARSLFISE 184 E L+ N S E + L+ RE EIL G SN EIA L +S Sbjct: 124 ESVLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREIADKLTLSM 183 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSW 209 TVK HL N+F K+ RT+A+ Sbjct: 184 RTVKAHLSNIFNKMRCSCRTEAIVK 208 >UniRef50_C7Q058 Two component transcriptional regulator, LuxR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q058_CATAD Length = 258 Score = 179 bits (455), Expect = 5e-44, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 89/243 (36%), Gaps = 42/243 (17%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSL--DDISSGSIILLDMMEADKKL 67 +L++ L + L+ + G+ + ++ ++ ++L+D+ D Sbjct: 3 KVLIVDDQVLIRAGMAAILRAAPGYEVVGEACDGVEAVTMAALTEPDVVLMDIRMPDMDG 62 Query: 68 IHYWQDTL-SRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I + L S + N +IL+L T + Y +G ER++ L+ V Sbjct: 63 IAATRAILGSGRENLPRILILTTFDMDQYVYEALRAGADGFVLKDTPPERLLAALKAVAD 122 Query: 127 GECYFTQKLASYLITH-------------------------------------SGNYRYN 149 G+ F+ + L+ G Sbjct: 123 GDTLFSSTVTRRLVQAYVTATGLDGEPQGPGPGPGPGPVATPAPGLVPRSRRPDGPSSAE 182 Query: 150 STESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSW 209 A LT RE ++L + G SN EIA L +SE TVKTHL K+ + +R QAV Sbjct: 183 RAALAALTTRETDVLRLVATGLSNGEIAERLVVSEGTVKTHLNRAMAKLNLSSRAQAVVL 242 Query: 210 AND 212 A + Sbjct: 243 AYE 245 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 179 bits (455), Expect = 5e-44, Method: Composition-based stats. Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 11/206 (5%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +L+ + L L + L++ + + +L I++ ++LLD+ Sbjct: 6 RVLVADDHPIVRQGLKTFLDIQPDLSVVAEARDGDEALALIAAHEPDVVLLDLNMPGSDG 65 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 L+ ++ K+++L + + G Y D + + ++ V G Sbjct: 66 AKVLTR-LAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIRSVADG 124 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 + F ++ + + A LT RE+E+L + G SN EIA+ L ++E TV Sbjct: 125 QVIFAREAVTAM------TAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVAEKTV 178 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDN 213 KTHL +LF+K+ V +RTQA +A + Sbjct: 179 KTHLSSLFRKLGVADRTQAALYAVTH 204 >UniRef50_C4ZEG3 Two-component response regulator (Extracellular proteinase response regulator) n=3 Tax=Bacteria RepID=C4ZEG3_EUBR3 Length = 214 Score = 179 bits (454), Expect = 7e-44, Method: Composition-based stats. Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 5/205 (2%) Query: 13 LLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKLI 68 +++ S+ L L L + + + N + LD + ++LLD+ + Sbjct: 5 IMITDDHSMIREGLKNLLELDGDIKVIAEAENGEDCLDKLKTFRPDVLLLDINMPKMNGL 64 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 + L + + +K+L+L + Y ING + + + + GE Sbjct: 65 EVLK-ALKDRKSKVKVLVLTVHNETEYLMKAVDIGINGYVLKDSESAELKKAIFTIADGE 123 Query: 129 CYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVK 188 Y L L + + + LT RE E+L ++ +G N +IA+ + ISE TVK Sbjct: 124 TYIQPSLIPALNSKMIQKNEDELKIDALTKREMEVLKEMAVGKFNRDIAKEMKISERTVK 183 Query: 189 THLYNLFKKIAVKNRTQAVSWANDN 213 H+ ++FKK+ V +RTQA +A N Sbjct: 184 NHISSIFKKLEVTDRTQAAVFAIRN 208 >UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacillaceae RepID=Q5WI37_BACSK Length = 210 Score = 178 bits (453), Expect = 8e-44, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 94/206 (45%), Gaps = 5/206 (2%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISSG--SIILLDMMEADKKL 67 +LL + L ++ + + +TG+ + +++L + + +LD+ + Sbjct: 3 KVLLAEDQVMVRQGLKAMIETDEDIKVTGEADDGRKALRLCETHVFDVAILDIRMPEMDG 62 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + + +KIL+L T +D+ Y +NG D E ++ ++ + G Sbjct: 63 IEAAK-MMRLRYPKMKILMLTTFDDHQYVVESLKLGVNGYMLKNGDTESLIRSIKSTING 121 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 ++A+ ++ + + LT RE+ IL + G +N EIA L +S TV Sbjct: 122 GLSLEDQVAAKVVPTLLQNQEEPSIDPSLTPRERAILTCIGEGLNNKEIAERLGLSVGTV 181 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDN 213 K ++F K+A+++RTQ +A + Sbjct: 182 KNQTSHIFDKLALRDRTQLAIYAIRH 207 >UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria RepID=Q09C30_STIAU Length = 213 Score = 178 bits (453), Expect = 8e-44, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 90/207 (43%), Gaps = 8/207 (3%) Query: 13 LLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKLI 68 ++L+ +L + L+ L + G+ + + ++ + S ++L+D+ + Sbjct: 4 IVLVDDHALIREGIRSLLEFTPDLHVVGEASDGEEAVKRVRELSPDVVLMDVRMPRMTGL 63 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 + + R+ +++LL T ++ + G ++++ + ++ V GE Sbjct: 64 EALR-AMRREAPERRVVLLTTFDEDSVVVEALRAGVKGFLLKDVTRDQLADAIRRVANGE 122 Query: 129 CYFTQKLASYL---ITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 +A + T ++ LT RE E++ + G SN EIA L +E Sbjct: 123 TLLPPGVAERVQRGFTEVPQEFPHAELPEGLTRRELEVMRLIARGLSNREIATVLGTAEG 182 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWAND 212 TVK N+ K+ V++RT+AV A + Sbjct: 183 TVKNQTSNILAKLGVRDRTRAVLRAME 209 >UniRef50_B2JVJ8 Two component transcriptional regulator, LuxR family n=16 Tax=Proteobacteria RepID=B2JVJ8_BURP8 Length = 219 Score = 178 bits (453), Expect = 9e-44, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 5/209 (2%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLD--DISSGSIILLDMMEADKKL 67 T+LLI +L + Q ++ + + G+ + + +D ++L+D+ D Sbjct: 6 TVLLIDDHALFRKGVAQLIQMNPAFRVVGEASSGRVGVDLAVRLKPDVVLIDLNMPDMNG 65 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + + + + L+L ++ +G + E + LQ L+G Sbjct: 66 IETL-EMMRQHGVDARFLMLTVSDNERDVVAALRAGASGYLLKDMEPEELCLNLQKALQG 124 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 ++ + L + + L+ RE+E+L+ L G N EIAR L IS TV Sbjct: 125 TAVLSEAVTGKLFHALSAGQPLPANQSNLSVREQEVLDYLVEGMCNKEIARKLDISVGTV 184 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDNLRR 216 K H+ +L K+ + +R +AV W ++ R Sbjct: 185 KVHVKHLLHKLDLHSRVEAVVWHHEQAAR 213 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 178 bits (452), Expect = 1e-43, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 81/211 (38%), Gaps = 6/211 (2%) Query: 8 IHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEA 63 + ++L+ SL + + L + + G+ + L + + ++ +D Sbjct: 1 MELCRIILVDDHSLFRSGMRGLLDRYDGIRVVGEASTGEEFLAMLPATEADVVFMDFAMP 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + L+ + +K++ L+ D Y G + V+ ++ Sbjct: 61 GMNGAETTEKALALE-PGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAIET 119 Query: 124 VLRGECYFTQKLASYLITHSGNYRYN-STESALLTHREKEILNKLRIGASNNEIARSLFI 182 V G YF +++ L + L+ RE EIL + G SN EIA LFI Sbjct: 120 VAAGGTYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADELFI 179 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 S+ TV H N+ +K KN V +A + Sbjct: 180 SKRTVDKHRANILEKTGCKNTASLVVYAVRH 210 >UniRef50_D1VBH1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=D1VBH1_9ACTO Length = 248 Score = 178 bits (451), Expect = 1e-43, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 82/211 (38%), Gaps = 10/211 (4%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDD--ISSGSIILLDMMEADKKL 67 +L+ L L L + + + ++ + ++L+D+ Sbjct: 27 RVLIADDEGLVRAGFRALVEATPDLTVVAEAADGVAAVRESRRLRPDVVLMDIRMPVMNG 86 Query: 68 IHYWQDTLSRK-NNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + + + IL++ T +D Y G E ++ ++ V Sbjct: 87 LEATRLIAADAVRPGPGILVVTTFDDDEYVFEALRAGAAGFILKDTQPENLLAAIRTVAA 146 Query: 127 GECYFTQKLASYLITHSGNYRYNSTES-----ALLTHREKEILNKLRIGASNNEIARSLF 181 G+ + LI + LT RE+ +L ++ G SN EIA++L+ Sbjct: 147 GDALLAPGVTRRLIAAFVRVPAPPASPLTGLASTLTDRERAVLTQIANGYSNAEIAQALY 206 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 +S +TVKTH+ +L K+A ++R Q V A + Sbjct: 207 VSVSTVKTHVGHLLAKLAARDRAQLVIAAYE 237 >UniRef50_C3JVF4 Two component transcriptional regulator, LuxR family n=2 Tax=Rhodococcus erythropolis RepID=C3JVF4_RHOER Length = 220 Score = 178 bits (451), Expect = 1e-43, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 87/211 (41%), Gaps = 11/211 (5%) Query: 13 LLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKLI 68 +L+ + L + + G + + + + ++L+D+ + Sbjct: 4 VLIADDQQVVRQGFELFLSGHPEIRVVGHAKTGVEAYEQVRALRPDVVLMDIRMPHGDGL 63 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 ++ L+ + +++++ T + Y G D E + + + V G Sbjct: 64 TATREVLA-EFPGTRVIVITTFDLDEYVFEALDSGAAGFLLKDADPEELSSAVLTVAEGG 122 Query: 129 CYFTQKLASYLITHSGNYRYNSTESAL------LTHREKEILNKLRIGASNNEIARSLFI 182 + +L S LI + +A L+ RE +++ L G NN+IA SL + Sbjct: 123 SVLSPRLTSRLIVEFARRKPAPMSTARSGSDHGLSAREMDVVQLLSQGLGNNDIADSLSL 182 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 ++TVK+H+ N+ KK+ V+ R Q V WA N Sbjct: 183 EQSTVKSHISNICKKLQVRTRVQIVIWAYRN 213 >UniRef50_A0K2I9 Two component transcriptional regulator, LuxR family n=5 Tax=Actinomycetales RepID=A0K2I9_ARTS2 Length = 250 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 46/233 (19%), Positives = 87/233 (37%), Gaps = 33/233 (14%) Query: 12 TLLLITKSSLQATA--LLQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +LL+ L L+ + L I G+ + ++ + ++L+D+ Sbjct: 8 KVLLVDDQPLLRMGFRLILEGEDDLRIVGEASDGAEAIRQVREVDPDVVLMDVRMPVLDG 67 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + S ++ K+++L T + Y + +V+ ++ V G Sbjct: 68 IEATRAVTSS-GSHAKVIILTTFDLDEYAFAGLQAGASAFLLKDVAPSELVSAVRVVASG 126 Query: 128 ECYFTQKLASYLITHS----------------------------GNYRYNSTESALLTHR 159 + ++ L+ G + LT R Sbjct: 127 DAVVAPRVTRRLLEAYVREGNPPAVNGQRAGTSAPAAGRGRHSLGEEQQRDPLLEALTPR 186 Query: 160 EKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 E E+L + G SN EIA F+SE TVKTH+ + K+ +++R QAV +A + Sbjct: 187 EMEMLEAMAEGLSNAEIAHRFFLSEATVKTHVRRILAKLHLRDRVQAVVYAYE 239 >UniRef50_B5XUA0 Transcriptional regulator, LuxR family n=5 Tax=Klebsiella RepID=B5XUA0_KLEP3 Length = 217 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 82/218 (37%), Positives = 132/218 (60%), Gaps = 12/218 (5%) Query: 4 EVHSIHGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGS-IILLDMME 62 +S + IT S+Q+ A +L ++L L NI + L + +IL D+ Sbjct: 5 NGNSSSSRQVTFITHPSIQSKAFASYLSETLMAPVVLQNINKPLAQRLAKDSVILFDIAV 64 Query: 63 ADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 ++KKL W+D + + +N ++L++N+ + Y ++ WP + GVF +D+ R++ G++ Sbjct: 65 SNKKLNGVWRDIIRLQADNPRLLIINSAQKYELYEMAQWPALYGVFRHDDDESRLIEGVK 124 Query: 123 GVLRGE-----CYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIA 177 VL GE + ++ ++ E++ LT RE EILN+LR GA+N +IA Sbjct: 125 AVLNGEQTAELSVMHPAM------YAADHASAPVENSPLTERECEILNELRCGATNLDIA 178 Query: 178 RSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLR 215 R+LFISENTV+THLYN+F+K++VKNRTQAVSWAN++LR Sbjct: 179 RALFISENTVRTHLYNVFRKLSVKNRTQAVSWANEHLR 216 >UniRef50_C7MLQ9 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=29 Tax=Actinobacteria (class) RepID=C7MLQ9_CRYCD Length = 261 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 84/209 (40%), Gaps = 9/209 (4%) Query: 13 LLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDD--ISSGSIILLDMMEADKKLI 68 +L++ L L + + G+ N + + ++L+D+ + I Sbjct: 45 VLIVDDQDLVRNGFKLILSSYDHVRVVGEASNGIEAYEQSLALRPQVVLMDIRMPVEDGI 104 Query: 69 HYWQDTLSRKNN-NIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + ++L+L T + Y +G + + +V ++ V G Sbjct: 105 AATRKIVGDTALAQTRVLVLTTFDIDEYVYDALQAGASGFMLKDAEPDDIVRAVRTVAAG 164 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESA----LLTHREKEILNKLRIGASNNEIARSLFIS 183 + + LI + R ++ +A LT RE+EIL + G SN EIA L IS Sbjct: 165 DALIQPSITRRLIETFVSSRPRTSAAAGGLVDLTDREREILRFVARGMSNEEIADDLVIS 224 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 TVKTHL + K+ +R Q V A + Sbjct: 225 PATVKTHLARIMGKLDAHDRAQLVVAAYE 253 >UniRef50_Q027R2 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027R2_SOLUE Length = 247 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 89/219 (40%), Gaps = 18/219 (8%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +++ + L L L++ + + + ++ LD + I+LLD+ Sbjct: 24 RIVVADDHPIFRDGLCRLLALEEDFEVVAQAQDGRQVLDVLQQHEPDILLLDLKMPGLDG 83 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + Q L N ++++L +D +G+ E ++ ++ V G Sbjct: 84 LATLQR-LQIAKNKTRVIVLTASDDKNEFVQAMKLGTSGIVLKQTATELLIKSIRKVHAG 142 Query: 128 ECYFTQKLASYLITH-------------SGNYRYNSTESALLTHREKEILNKLRIGASNN 174 E + + +I S E + L+ RE+EI+ + G N Sbjct: 143 EIWLDSHTTAAVIRQFVANDETPAMAAPSQAPPTRERERSPLSQREREIVALVAQGFKNK 202 Query: 175 EIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 E+A +FISE TVK HL+N+F K+ V +R + +A N Sbjct: 203 EMAEKMFISEQTVKNHLHNIFDKLGVSDRLELALYAIHN 241 >UniRef50_A9U739 Predicted protein n=2 Tax=cellular organisms RepID=A9U739_PHYPA Length = 214 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 5/205 (2%) Query: 12 TLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +LL L ++ ++ ++ L I G N + ++ ++L+D+ Sbjct: 5 KVLLADDQELILESLHIVLSMEPDLEIVGLARNGEEAVKGCEQLMPDMVLMDVNMPVMDG 64 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + + KI++L + ++ Y G + + G++ V G Sbjct: 65 VAATA-LIKERMPATKIIMLTSYKEVEYVLAALSHGAEGYLLKAIHPKDLAAGIRVVQAG 123 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 +Q++AS +I + + LT RE E+L+KL G N EIA +LF+SE TV Sbjct: 124 GTLISQEMASKMIKNMNSATPAKHNEFGLTAREIEVLHKLAAGLRNQEIAEALFLSEGTV 183 Query: 188 KTHLYNLFKKIAVKNRTQAVSWAND 212 K ++ ++ K+ VK R +A A D Sbjct: 184 KNYISTIYSKLNVKGRREATQKARD 208 >UniRef50_D0I549 DNA-binding HTH domain-containing protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I549_VIBHO Length = 224 Score = 177 bits (449), Expect = 2e-43, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 126/206 (61%), Gaps = 3/206 (1%) Query: 11 HTLLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGS-IILLDMMEADKKLIH 69 +T+LL+++ S+ TAL+ L++ + L Q+ + +S+ S ++L+D+ + + Sbjct: 11 YTILLVSEPSMTITALISCLEKEIRSAVSLVEKQQISEKLSTSSGLVLIDLSAFEGDTVG 70 Query: 70 YWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGEC 129 + + +L+ + L N D +++ +WP I GVF +D E + +G++ +L GE Sbjct: 71 FVKQSLAPFSEQHVFALFNAH-DLSAKELASWPFIKGVFKKEDDLEHLCHGIEKMLSGEY 129 Query: 130 YFTQKLASYLITHSGNYRYNSTESAL-LTHREKEILNKLRIGASNNEIARSLFISENTVK 188 + ++ + LI + N S + LT+RE++IL KL GASN+EIA SLF+SE+TVK Sbjct: 130 WLPRQKLAELIHYYQQNNNNIDYSEICLTNREQQILRKLVTGASNSEIADSLFVSEHTVK 189 Query: 189 THLYNLFKKIAVKNRTQAVSWANDNL 214 +HLYN+FKKI VKNR QAV WA +NL Sbjct: 190 SHLYNIFKKINVKNRVQAVFWAKNNL 215 >UniRef50_C1YGP4 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1YGP4_NOCDA Length = 225 Score = 177 bits (449), Expect = 2e-43, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 91/218 (41%), Gaps = 18/218 (8%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS----GSIILLDMMEADK 65 ++L++ L L L +++ + + G + +L+ +S+ + L+D Sbjct: 5 SVLIVDDQILMRQGLRKLLEIEEGVDVVGDAADGVEALEFLSAADPLPDVALVDARMPRM 64 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 + + + ++ L+L T +D G E +V ++ V Sbjct: 65 DGVALI-GRMRAEYPDVPALVLTTFDDDELVFGGLRAGARGYLLKDVPPEELVAAIRRVA 123 Query: 126 RGECYFTQKLASYLITHSG-----------NYRYNSTESALLTHREKEILNKLRIGASNN 174 RGE A L+ G E+ L+ RE+E+ + GA+N Sbjct: 124 RGETVLGGPAAELLVAALGEGPSTVPAADPPRPPGHGEAPRLSEREEEVARLVGTGATNR 183 Query: 175 EIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 E+AR+LFI+E T K H+ ++ +K+ +++RT+ W + Sbjct: 184 EVARALFITEGTAKNHVTSILRKLGLRDRTRLALWVRE 221 >UniRef50_A8LG56 Two component transcriptional regulator, LuxR family n=4 Tax=Actinomycetales RepID=A8LG56_FRASN Length = 244 Score = 177 bits (449), Expect = 3e-43, Method: Composition-based stats. Identities = 48/206 (23%), Positives = 93/206 (45%), Gaps = 5/206 (2%) Query: 12 TLLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDI--SSGSIILLDMMEADKKL 67 ++LL+ L L L+ + + G+ + + + I ++ ++++D+ Sbjct: 30 SVLLVDDEELVRVGLRVILESGGEIDVVGEASDGSQVVPLIRENTPDVVIMDIRMPRVDG 89 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + ++ L+ + KIL+L T E Y NG +V ++ ++ Sbjct: 90 LAAIREILADVADPPKILVLTTFELDDYVYEALRSGANGFLLKRARPAEIVQAVRTIVSS 149 Query: 128 ECYFTQKLASYLITHSGNYRYNST-ESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 E + Y+ N + T A+LT RE ++L + G SNNEIA L++ T Sbjct: 150 ESLLFPEAIRYMAGKRPNREAHETMRRAVLTDREADVLRLISEGLSNNEIANRLYLGAQT 209 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWAND 212 VK+H+ ++ K+ ++RTQAV A + Sbjct: 210 VKSHVSSVLAKLGARDRTQAVIIAYE 235 >UniRef50_C3AL44 Response regulator receiver n=3 Tax=Bacillus RepID=C3AL44_BACMY Length = 578 Score = 176 bits (448), Expect = 3e-43, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 83/202 (41%), Gaps = 5/202 (2%) Query: 13 LLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKLIHY 70 +L++ + + +L L + ++ ++L +++L+D+ I Sbjct: 376 ILIVDDQPIISDSLEFLLDKYGFRVSVANSGAQALKQCEERQPNVVLMDIQMPKMNGITT 435 Query: 71 WQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECY 130 + + + + KI+++ T E+ G E +V ++ V G Sbjct: 436 MK-KIKNRWPDTKIIMVTTFEETSSVSEAIEAGAEGYVLKSVQPEELVAAIRLVHLGGTM 494 Query: 131 FTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTH 190 +Q +A+ L LT RE ++L L+ G EIA LF+SE TV+ + Sbjct: 495 LSQDVATRLFKEYSPMPKKPP--YELTPREMDVLGCLKEGLRYKEIAAKLFLSEGTVRNY 552 Query: 191 LYNLFKKIAVKNRTQAVSWAND 212 +++ K+ V R +AV A D Sbjct: 553 ASSIYMKLQVSGRGEAVKKALD 574 >UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=C4L5Q6_EXISA Length = 230 Score = 176 bits (448), Expect = 4e-43, Method: Composition-based stats. Identities = 46/219 (21%), Positives = 90/219 (41%), Gaps = 19/219 (8%) Query: 12 TLLLITKSSLQATALLQ--HLKQSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADKKL 67 + ++ L L + L+ + + + ++ I+++D+ D Sbjct: 7 RIAIVDDHELFREGLKRIFDLEDEFTVVAEGRTGREAIRIAGEQKPEILIMDINMPDMNG 66 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + LS + ++L+L+ +D Y +G +++ ++ V + Sbjct: 67 IEATKQ-LSLLSPETRVLILSIHDDESYITHALEAGASGFLLKEVASTELISAVRAVAKD 125 Query: 128 ECYFTQKLASYLITHSGNY--------------RYNSTESALLTHREKEILNKLRIGASN 173 Y K+ + ++ R + LL+ RE E+L+ L G SN Sbjct: 126 GAYLHPKVTTNVLKEYRRLLQFKGEQAGRGVESRTDDPVYQLLSRREVEVLHLLADGRSN 185 Query: 174 NEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 +I+ LFISE TVK H+ ++ +K+ V +RTQAV A Sbjct: 186 RDISDMLFISEKTVKNHVSSVLRKMDVNDRTQAVVDAIR 224 >UniRef50_B8FX94 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FX94_DESHD Length = 212 Score = 176 bits (447), Expect = 4e-43, Method: Composition-based stats. Identities = 47/205 (22%), Positives = 96/205 (46%), Gaps = 6/205 (2%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDD--ISSGSIILLDMMEADKKL 67 +++ L L + ++ + + ++ + Q +++ I+L+D+ Sbjct: 3 RVVIADDHPLLREGLRRILEFEEGIQVVCEVGDGQGAINVSRTLDFDILLMDLNMPGVNG 62 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + + R+N I IL+L + + G D + +++ ++ V G Sbjct: 63 LEACR-VIRRENETIGILVLTVDDSDEKVFQVLQLGVAGYLLKDVDPKTLIDSIRKVHSG 121 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 + + + L+ + N ++ L+ RE +IL + G+SN EI ++LFISE TV Sbjct: 122 QPILSPAVTGKLLGQLVHPTQNR-DTCGLSDRELQILTYVVKGSSNREIGQALFISEKTV 180 Query: 188 KTHLYNLFKKIAVKNRTQAVSWAND 212 K HL ++F+K+AV++RTQA A Sbjct: 181 KNHLSSIFRKLAVEDRTQAALKAVK 205 >UniRef50_B2JVP2 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JVP2_BURP8 Length = 215 Score = 176 bits (447), Expect = 5e-43, Method: Composition-based stats. Identities = 47/210 (22%), Positives = 90/210 (42%), Gaps = 5/210 (2%) Query: 11 HTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLD--DISSGSIILLDMMEADKK 66 HT+LLI +L + Q ++ S +TG+ + Q ++ ++L+D+ Sbjct: 4 HTVLLIDDHALFRKGVAQLIQMNPSFEVTGEATSGQDGIEMAVRLKPDVVLIDLNMPRMN 63 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I + + + + + ++L ++ +G D E + LQ L+ Sbjct: 64 GIETL-EGMRQAGVDARFIMLTVSDNERDVVAALRAGAHGYLLKDMDPEDLCVSLQKALK 122 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 G ++ + L+ + LT RE E+ + L G N IAR L IS T Sbjct: 123 GTAVLSESVTGSLVHALSGGQRIPAAQNDLTARELEVFDYLVAGLCNKAIARKLDISVGT 182 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDNLRR 216 VK H+ ++ +K+ + +R +AV W ++ R Sbjct: 183 VKVHVKHVLRKLDLHSRLEAVLWQQEHGSR 212 >UniRef50_B9MPQ9 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=B9MPQ9_ANATD Length = 211 Score = 176 bits (447), Expect = 5e-43, Method: Composition-based stats. Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 5/203 (2%) Query: 11 HTLLLITKSSLQATALLQHLK-QSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +L++ + L L+ ++ + N + +++ + ++L+D+ Sbjct: 4 PKVLIVDDNPAVLDGLKIILELENFEVVSLCTNAKEAIEFLEKKHADVVLMDIRMPVMDG 63 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + K N+K+++L T + Y +G D + +VN + VL G Sbjct: 64 IEGTFN-IKTKFPNVKVIILTTFCEEDYIKKSLSFGADGYILKSSDAKHIVNSILSVLDG 122 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESAL-LTHREKEILNKLRIGASNNEIARSLFISENT 186 + +++A Y+ E LT RE EI + G SN EIAR LFISE T Sbjct: 123 KVVMDKEIALYISDVLKRTSKQLLEKTQNLTERELEIAKLISQGYSNKEIARMLFISEGT 182 Query: 187 VKTHLYNLFKKIAVKNRTQAVSW 209 V+ ++ ++ +K+ +KNRTQ + Sbjct: 183 VRNYITSILQKLNLKNRTQIAVY 205 >UniRef50_B4WJL3 Response regulator receiver domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WJL3_9SYNE Length = 242 Score = 176 bits (447), Expect = 5e-43, Method: Composition-based stats. Identities = 57/232 (24%), Positives = 92/232 (39%), Gaps = 32/232 (13%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS------GSIILLDMMEA 63 +LL+ L L L L+ LAI + N + +LD +++ + L+DM Sbjct: 3 KILLVEDQKLIREGLNALLSLESDLAIIAEAANGKIALDWLANAKPDQLPELALIDMRMP 62 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + +S+ IK+L+L T +D G E + ++ Sbjct: 63 VMDGV-ATTAMISKHYPAIKVLVLTTFDDDQLIAQSMAVGAQGYLLKDTPSEELAAAIRS 121 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNS-----------------------TESALLTHRE 160 V +G F + +I N E A LT RE Sbjct: 122 VAKGYSQFGPGIVQKMIGALPNIAAPPVSRSTRASSALDTSLEANKVDLPPEVAALTPRE 181 Query: 161 KEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 E+L + GASN EIA+ LF+SE TVK H+ ++ ++ +++RTQA A Sbjct: 182 TEVLVCIGNGASNKEIAQQLFLSEGTVKNHVTSVLSRLGLRDRTQAALLAQS 233 >UniRef50_A3CKH3 Two-component system transcriptional regulator (CheY domain and HTH-like DNA-binding domain), putative n=30 Tax=Bacteria RepID=A3CKH3_STRSV Length = 227 Score = 176 bits (446), Expect = 6e-43, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 87/212 (41%), Gaps = 12/212 (5%) Query: 12 TLLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDI--SSGSIILLDMMEADKKL 67 +L+ +L +L L + + G + + + L+ + +IL+D+ Sbjct: 3 KVLIADDQALIRESLQIILSAHADIEVVGTVGDGKEVLEKLHRVRPDVILMDIRMPVMDG 62 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + + + ++KI++L T +D + +G E + +Q V RG Sbjct: 63 VLCTK-AVKEQYPDVKIIILTTFDDDEFIFSALKYGASGYILKGVSTEELHEAIQTVYRG 121 Query: 128 ECYFTQKLASYLITHSGNYRYN-------STESALLTHREKEILNKLRIGASNNEIARSL 180 +A+ + + ++ E +I+ ++ G SN EIA L Sbjct: 122 GAMINPNIATKVFKIFSQMAQSNFAITVTEENIEDMSRTEWKIIQQIGFGISNKEIAAKL 181 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 F+SE TV+ +L + K+ +++RTQ WA Sbjct: 182 FLSEGTVRNYLSGILAKLNLRDRTQLAIWAVQ 213 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 176 bits (446), Expect = 6e-43, Method: Composition-based stats. Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 16/209 (7%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +L++ + + L L + L + G+ N ++ ++L+D+ Sbjct: 8 RILVVDDHHVVRSGLAASLGLEDDLNVVGEAGNAGEAVTQFRKHHPDVVLMDLRLPGANG 67 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 D L R+ + ++L+ T + G +E +++ ++ V G Sbjct: 68 TAATAD-LRREWPDARVLMFTTFDGEEDIYRAMQAGARGYLLKSAAREELLSAIRAVAAG 126 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 E + + LA L + RE+E+L + G +N EIA +L ISE TV Sbjct: 127 ERHLSAALAQRLAGRVAAPDV--------SDREREVLQLIARGKANKEIAAALGISEETV 178 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDNLRR 216 K H NLF K+ V +R QA S + +RR Sbjct: 179 KRHASNLFVKMGVADRAQATS---EGIRR 204 >UniRef50_D1BXU0 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D1BXU0_XYLCX Length = 223 Score = 176 bits (446), Expect = 7e-43, Method: Composition-based stats. Identities = 55/212 (25%), Positives = 88/212 (41%), Gaps = 10/212 (4%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 +L+ L L L +L+ L + G+ + +L I LD+ Sbjct: 3 RVLIADDQPLVRAGLTALVNLEPDLEVVGEAGDGVTALAMAQDLRPDIACLDIRMPGLDG 62 Query: 68 IHYWQDTL-SRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I + I +L+L T + Y ++G + E + ++ V Sbjct: 63 IAVARRLCGPDVEAPIPVLVLTTFDLDDYVFGALEAGVSGFLLKDAEPETITTAIRQVAA 122 Query: 127 GECYFTQKLASYLITHSGNYRY-----NSTESALLTHREKEILNKLRIGASNNEIARSLF 181 G Q L ++ R S + +LT RE+EIL L G SN+EIAR+L Sbjct: 123 GNGTIDQTLTRRILREFVQRRSLQPVSTSRGNGVLTSREQEILLLLAQGMSNDEIARTLV 182 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 + +TVK+HL + K+ V++R QAV WA N Sbjct: 183 VELSTVKSHLARMLPKLGVRSRLQAVVWAYQN 214 >UniRef50_UPI0001789139 two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=UPI0001789139 Length = 216 Score = 176 bits (446), Expect = 7e-43, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 87/208 (41%), Gaps = 11/208 (5%) Query: 12 TLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLD---DISSGSIILLDMMEADKK 66 ++L+ ++ LL + + ++ + + +L D ++L+D+ Sbjct: 3 SVLIADDDPFIRESLKLLVGMDPDIEVSAVAEHGEEALSLLMDGLHADVVLMDIRMPVCD 62 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + + + + ++++L+L T +D Y +G +R++ G++ V Sbjct: 63 GVEGTRR-IRERYPDVRVLMLTTFDDDDYIVEALRNGASGYLLKNIPPDRIIQGIKTVHD 121 Query: 127 GECYFTQKLASYLITHSGN-----YRYNSTESALLTHREKEILNKLRIGASNNEIARSLF 181 G +A L R E LT EK ++ + G SN EIA L+ Sbjct: 122 GNMLIHPDIARKLTGMLRPTPQPVPRSAELEQFGLTPAEKRVVALIAEGLSNKEIAAQLY 181 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSW 209 +SE TVK ++ + K+ +++RTQ + Sbjct: 182 LSEGTVKNYVTEILGKLNLRDRTQIAIF 209 >UniRef50_A7HS72 Two component transcriptional regulator, LuxR family n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HS72_PARL1 Length = 213 Score = 175 bits (445), Expect = 7e-43, Method: Composition-based stats. Identities = 44/202 (21%), Positives = 91/202 (45%), Gaps = 5/202 (2%) Query: 15 LITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKLIHY 70 LI + A+++ L+ + +++ G+ + + + +I+ + +LD+ + Sbjct: 8 LIDDHHVLRQAVVEMLEAEEDISVIGQSGDARSGIGEIANLKPDVAILDLKMPGMTGLAA 67 Query: 71 WQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECY 130 + L R I++ ++ Y +G +E ++ ++ V G Y Sbjct: 68 IGEIL-RAAPKTGIIIFTMYDNPAYVWETTNAGASGYVLKSASKEDLLRAVRAVHAGGGY 126 Query: 131 FTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTH 190 ++ L+ S + A LT RE ++L L G SN IA++L I+E+TVK H Sbjct: 127 LQAEVTKPLLRRLAQDARTSGQKATLTSRELQVLECLADGQSNKMIAQTLSITEDTVKAH 186 Query: 191 LYNLFKKIAVKNRTQAVSWAND 212 L +L++K+ +R AV+ + Sbjct: 187 LKSLYEKLGASDRAHAVAISLR 208 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 175 bits (445), Expect = 7e-43, Method: Composition-based stats. Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 10/209 (4%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS------GSIILLDMMEA 63 ++++ + T L +L + + + + Q ++ + + +IL+D+M Sbjct: 8 KVMIVDDHDMVRTGLRTYLMLEPKFEVVAEAGSGQAAISMLEAGLPSGLPDVILMDLMMP 67 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 I + + + N+KI++L + + E ++ L G Sbjct: 68 GMDGIETTRQLIV-EYPNLKIIMLTSFLEDDKVYGAIEAGAVSYVLKTVSAEELIYALHG 126 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 ++G T ++ L T R + LT REKE+L + G SN EI L IS Sbjct: 127 AVKGMPVMTADVSQAL-TRGLRQRTAQSGDEELTEREKEVLLLIAEGRSNKEIGEELHIS 185 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 TVKTH+ NL K +++RTQ A+ Sbjct: 186 VKTVKTHVSNLLMKCELEDRTQLAVLAHR 214 >UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeobacter violaceus RepID=Q7NN43_GLOVI Length = 217 Score = 175 bits (445), Expect = 7e-43, Method: Composition-based stats. Identities = 46/206 (22%), Positives = 90/206 (43%), Gaps = 6/206 (2%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +LL+ L L L + + + + + + +L + ++LLD+ Sbjct: 6 RVLLVEDDPLFRMGLAMVLRHQPQIELVAEAEDGETALALANRHRPQLVLLDIGLPGLDG 65 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 L +++ I++L+L + E+ +G +R++ ++ V G Sbjct: 66 RQTL-VRLKQEHPEIRVLVLTSREEAGLVQAMLQAGADGYCLKGIGPDRLLTVIREVSAG 124 Query: 128 ECYFTQKLASYLITHSG-NYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 +F K+ + + + +A LT RE+E+L + GASN EI R L IS T Sbjct: 125 NGWFDAKVLAQVRSAFAVAPSEPPANAAALTEREREVLGWIARGASNPEIGRQLHISSGT 184 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWAND 212 V+ H++ + +K+ +RTQA A + Sbjct: 185 VRVHVHAILRKLGATDRTQAAVLALE 210 >UniRef50_D1CI66 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1CI66_THET1 Length = 218 Score = 175 bits (445), Expect = 7e-43, Method: Composition-based stats. Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 6/207 (2%) Query: 12 TLLLITKSSLQATALLQHLK-QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKLI 68 +L+ +L +L L+ + + + G+ + +++ ++L+D+ + Sbjct: 2 RVLIADDHALFRDSLRTLLEARGVEVVGEAETGKEAVELARELRPDVVLMDLKMPGMDGL 61 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 + +S + +K+++L ED G + ++ L+ RGE Sbjct: 62 AATR-MISAEMPEVKVVVLTASEDDEDLFEAVKSGALGYMFKDVRSDQFFELLEAASRGE 120 Query: 129 CYFTQKLASYLITHSGNYRYNST-ESALLTHREKEILNKLRIG-ASNNEIARSLFISENT 186 FT LA L+ + E +LT RE+EIL L G SN E+A L +SENT Sbjct: 121 PAFTPGLARKLLREMSKPAGRAEREPEVLTEREQEILELLVQGVTSNKELAERLILSENT 180 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDN 213 VK HL N+ K+ ++NRTQ V++A + Sbjct: 181 VKYHLRNILDKLHLQNRTQVVAYALQH 207 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 175 bits (445), Expect = 7e-43, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 89/209 (42%), Gaps = 9/209 (4%) Query: 12 TLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 +L+ ++ + L + + + + G+ N + ++ + + ++L+D+ + Sbjct: 5 KVLVAEDHTIVRKGLCSLLYSEPDIEVVGEAENGREAIKMVEELAPDVVLMDISMPELNG 64 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + L +K ++KIL+L+ Y +G ++ + G Sbjct: 65 MDATRQ-LKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAIHAAHAG 123 Query: 128 ECYFTQKLASYLITHSGNYRY----NSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 +C+ + ++ +I + + LL+ RE+E+L + G +N EIA L+IS Sbjct: 124 DCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIAGHLYIS 183 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 TV+ H ++ KK+ + + +A Sbjct: 184 PKTVEAHRNHIQKKLGLNGTAELTKYAIR 212 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 175 bits (445), Expect = 8e-43, Method: Composition-based stats. Identities = 45/213 (21%), Positives = 91/213 (42%), Gaps = 10/213 (4%) Query: 9 HGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 + L+ ++ L L I G+ + +++LD I +++ D+ Sbjct: 4 TNTKIFLVDDHAILREGLKMILSGQFEICGESGDAEKALDQIGKLNPDLVITDISMPGLS 63 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I ++ L ++ NI+ ++L+ ++ Y ING + ++ ++ V + Sbjct: 64 GIDLVKN-LRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDLLRAIEAVHK 122 Query: 127 GECYFTQKLASYLITHSGNYRYNSTES-------ALLTHREKEILNKLRIGASNNEIARS 179 GE Y + + ++ ++ E+ ++L+ RE+EIL + G SN I + Sbjct: 123 GETYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNSNESIGKI 182 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 L IS TVK H N+ KK+ + V +A Sbjct: 183 LGISPATVKVHRANIMKKLNLHKVADLVMYAIR 215 >UniRef50_A4FB05 Two component system response regulator n=43 Tax=Bacteria RepID=A4FB05_SACEN Length = 235 Score = 175 bits (445), Expect = 9e-43, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 93/207 (44%), Gaps = 6/207 (2%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADKKL 67 T+++ ++ L L + L + + + Q ++ + ++L+D+ Sbjct: 7 TIVVADDQAMIRAGLVALLSAEPDLRVLAEAADGQAAVAAVQRRRPDVVLMDVRMPGVDG 66 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I ++ + + +++L + Y +G E +V + V G Sbjct: 67 ITAAREIVDITDGQTSVIMLTVHDLDEYVYAALRAGASGFLLKDAPPEELVRAVHTVAAG 126 Query: 128 ECYFTQKLASYLITHSG--NYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 + ++ L+ R TE + LT RE+++L ++ G SN EIAR+L ++E Sbjct: 127 DALLAPRVTRRLLQRFASLGVRDAGTELSGLTDRERDVLLEVAKGGSNAEIARNLGLAEL 186 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWAND 212 TVK+HLY++ +K+ + +RTQ V A + Sbjct: 187 TVKSHLYHVMQKLHLNSRTQLVITAYE 213 >UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5X6_PELCD Length = 223 Score = 175 bits (444), Expect = 9e-43, Method: Composition-based stats. Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 12/213 (5%) Query: 11 HTLLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKK 66 + L L T L L + + G+ + ++++ I + L+D+ Sbjct: 7 FKVFLADDHPLLRTGLRMSLSRFADIDFIGEASDGFKAVEKIKQNPPDVALIDVDMPGLS 66 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I + L ++ ++ +L+L++ D + + +G D + + ++ Sbjct: 67 GIAAVR-MLRKQYPDMTLLILSSYSDKHFIEEAMQAGADGYVLKSIDINELADLIRAFSC 125 Query: 127 GECYFTQKLASYLITHSGNYRYNSTE-------SALLTHREKEILNKLRIGASNNEIARS 179 GE + L + + + + A LT RE++IL+ L G N EI+ + Sbjct: 126 GEHPMSPYLMDLAVDWHASEQEEESPADKDDESDAFLTRREQQILSCLAQGQGNKEISNA 185 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 LFIS TVKTH+ N+FKK+ VK+R +AV A + Sbjct: 186 LFISTETVKTHIKNIFKKLEVKSRLEAVIAAKE 218 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 175 bits (444), Expect = 9e-43, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 10/211 (4%) Query: 12 TLLLITKSSLQATALLQHLKQ--SLAITGKLHN--IQRSLDDISSGSIILLDMME-ADKK 66 ++L+ +L L L++ + + G+ + +L + S ++++D+ A + Sbjct: 4 RVMLVDDHALVREGLRALLEREGDIEVVGETGSAAGVLALAEESRPEVVVMDLQLGAGRN 63 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + ++ L K IK+++L+ +D G E + ++ V R Sbjct: 64 GVEATRE-LVEKKPEIKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIRLVAR 122 Query: 127 GECYFTQKLASYLITHSGNY----RYNSTESALLTHREKEILNKLRIGASNNEIARSLFI 182 GE Y ++A +I R + E LT RE E+L G +N EIAR L I Sbjct: 123 GEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIARRLVI 182 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 S TV+ H N+ +K+ + +R V +A N Sbjct: 183 SVKTVQAHRANIMQKLGLHDRVDLVKYAIKN 213 >UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L0_HERA2 Length = 207 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 48/205 (23%), Positives = 86/205 (41%), Gaps = 9/205 (4%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +L++ + L+ L +Q G + Q++++ I ++LLD+ Sbjct: 3 RVLVVDDHPVVRHGLMAMLGWEQDFEPVGDAADGQQAVNLIEQQQPDVVLLDLRLPQLSG 62 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + T N + L+L T + Y G E V ++ + G Sbjct: 63 IEVMRHT-RASAPNTRFLVLTTYDTDEYIGPALNAGAAGYLLKDASPEEVFRAIRSIYEG 121 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 +A+ ++ L+ RE ++L L G SN IA SL ISENT+ Sbjct: 122 GAALQSGIAARVLKRLA----TEPAEDELSQRELDVLQLLVRGESNKAIALSLNISENTI 177 Query: 188 KTHLYNLFKKIAVKNRTQAVSWAND 212 K+H+ ++F K+ V++R +AV+ A Sbjct: 178 KSHVSHIFSKLDVRSRAEAVAVALQ 202 >UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphylococcaceae RepID=B9E7V9_MACCJ Length = 210 Score = 174 bits (443), Expect = 1e-42, Method: Composition-based stats. Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 10/202 (4%) Query: 13 LLLITKSSL--QATALLQHLKQSLAITGKLHNIQR---SLDDISSGSIILLDMMEADKKL 67 ++L+ + Q L + S + +N + LD+ +I++D++ + Sbjct: 6 IILVDDHHIVRQGMKFLLSTEASFNVIADFNNGRELLEHLDETQLPDLIIMDLVMPELNG 65 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + K ++K+L+L++ D + +G + + ++N ++ + G Sbjct: 66 IEATRR-IKAKYPDVKVLVLSSFIDEEHVLGVMDAGADGYEMKDSEPKALINTIKQIAAG 124 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 E F + + + L+ RE E+L + G +N EIA LF+SE TV Sbjct: 125 EQIFHPDVMKVRKSGMNLAHLRNP----LSKRELEVLKAMSEGLTNKEIAEKLFVSEKTV 180 Query: 188 KTHLYNLFKKIAVKNRTQAVSW 209 KTH+ ++F K+ V +RTQA + Sbjct: 181 KTHVSHIFAKLEVGDRTQASMY 202 >UniRef50_C6WIC9 Two component transcriptional regulator, LuxR family n=31 Tax=Actinobacteria (class) RepID=C6WIC9_ACTMD Length = 302 Score = 174 bits (443), Expect = 1e-42, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 85/208 (40%), Gaps = 9/208 (4%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +++ +L + L L + G + +R++ + ++L+D+ + Sbjct: 72 GVVIADDQALLRGSFEVLVGSAPDLRVLGTAEDGERAVAVAARVRPDVVLMDVRMPNVDG 131 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + +++L+L T + Y +G ++ ++ V G Sbjct: 132 IEATARICAAQAG-VRVLILTTFDLDEYVYAALRAGASGFLLKDTPPADLLAAIRVVASG 190 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALL---THREKEILNKLRIGASNNEIARSLFISE 184 E + + LIT R + L T RE+E+L + G SN EI +L +S Sbjct: 191 EALLSPSVTRRLITEFA-ARPAARPLPALDAVTAREREVLRLVAEGLSNTEITEALHVSR 249 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWAND 212 T+KTH+ L K+ ++R Q V A + Sbjct: 250 GTLKTHVGRLLHKLGARDRAQLVIAAYE 277 >UniRef50_A8ZMB6 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZMB6_ACAM1 Length = 215 Score = 174 bits (443), Expect = 1e-42, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 9/209 (4%) Query: 13 LLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADKKLI 68 +LL+ L + A L L++ L + G N + ++ +IIL+D+ + + Sbjct: 5 ILLVDDQYLIREGIASLLELEEDLEVAGMAANGKEAIKQAIDLKPNIILMDIRMPELNGV 64 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 + + + +I++L T +D G + + ++ G Sbjct: 65 EATA-KIKQSLPHCQIIMLTTFDDEELIVQSLLAGACGYLMKDIPPDDLGQAIKLADAGV 123 Query: 129 CYFTQKLASYLITHSGNYRYNSTE----SALLTHREKEILNKLRIGASNNEIARSLFISE 184 ++A LI R LT RE E+L L G +N EIA++ +SE Sbjct: 124 FQLAPEVAGKLIGSLKTQRAGDAPKLPTDTPLTTRELEVLKLLAKGNTNKEIAKAFNLSE 183 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 TVK H+ N+ ++ +++RTQA +A ++ Sbjct: 184 GTVKNHVSNILMRLGLRDRTQAAVYAVEH 212 >UniRef50_C1TRD8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRD8_9BACT Length = 222 Score = 174 bits (443), Expect = 1e-42, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 86/205 (41%), Gaps = 5/205 (2%) Query: 12 TLLLITKSSLQATALL--QHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +L++ ++ T ++ L+ + + G+ + +L+ + + L+D+ Sbjct: 6 RVLVVDDHAIFRTGVINTLSLEDDIEVVGEAGDGLEALEFMKKVDFDVALVDVTMPRMGG 65 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + ++ L ED + + G + +++ ++ V G Sbjct: 66 VELVS-KMEETGMARSVIALTALEDDRDMVFLSKAGVKGFVLKTSGFDELISAIRTVSGG 124 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 + Y + A L+ + L+ RE E+L L G + EIA L +S+ TV Sbjct: 125 DNYVDSRAAGKLLNCFSEDTSRERGMSRLSERELEVLYWLAQGLNGQEIAERLSLSDKTV 184 Query: 188 KTHLYNLFKKIAVKNRTQAVSWAND 212 K H+ ++ K+ V +RTQAV+WA Sbjct: 185 KNHISHILAKLKVSDRTQAVAWAWR 209 >UniRef50_Q1N2F1 Regulatory protein CsgD n=1 Tax=Bermanella marisrubri RepID=Q1N2F1_9GAMM Length = 216 Score = 174 bits (443), Expect = 1e-42, Method: Composition-based stats. Identities = 66/213 (30%), Positives = 110/213 (51%), Gaps = 6/213 (2%) Query: 5 VHSIHGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDD--ISSGSIILLDMME 62 + S L L+ ++Q + LL L+Q L + + R D+ I +I +D M Sbjct: 1 MDSAQKPHLWLVGPKNIQNSLLLGFLQQHLQMDCSMLENYRPADNHKIKLPHLICVDAMG 60 Query: 63 ADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 + L + +++ +N Y ++ WP+++G FY Q V G++ Sbjct: 61 MR---AENCRQMLESLPKDNQVVFINLDGQQSYDELLKWPNVSGFFYKGASQNHVSKGIR 117 Query: 123 GVLRGECYFTQKLASYLITHSGNYRYNSTESA-LLTHREKEILNKLRIGASNNEIARSLF 181 +LRGE +F++++ S + ++ + A LT RE +IL+ GA N +IA +L Sbjct: 118 SILRGELWFSRRILSQFMANNRRPPAPEQKPAHNLTRRESQILSLSASGAKNADIAAALN 177 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 +S +TVKTH+YNLFKK+ V NR QAV+WA + L Sbjct: 178 VSTHTVKTHMYNLFKKLDVSNRIQAVNWAKEYL 210 >UniRef50_C5C4U8 Two component transcriptional regulator, LuxR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C4U8_BEUC1 Length = 216 Score = 174 bits (442), Expect = 1e-42, Method: Composition-based stats. Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 6/207 (2%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSL--DDISSGSIILLDMMEADKKL 67 +L+ L +AL + ++ + + G + + + ++ S + LLD+ A Sbjct: 8 RVLVADDQELMRSALGTVIDVQPDMRLVGSVPSGEDAVREALAVSVDVALLDIRMARMDG 67 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + R + ++L+L T + Y +G V ++ V G Sbjct: 68 IEACAE-IRRHRPDTRVLMLTTFDLDEYLFRSVAAGASGFLTKDTPGADVAGAIREVHSG 126 Query: 128 ECYFTQKLASYLITH-SGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 + + LI + + +A L+ RE+++L L G SN EIAR LF++E+T Sbjct: 127 RSVVSPRATRALIDRIARAAPDAAAVAADLSPRERDVLALLARGFSNAEIARELFVAEST 186 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDN 213 VKTH+ +L +K+ V++R V WA N Sbjct: 187 VKTHVSSLTRKVGVRDRLHVVVWAYRN 213 >UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V5Y3_9FIRM Length = 223 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 49/215 (22%), Positives = 90/215 (41%), Gaps = 14/215 (6%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDD--ISSGSIILLDMMEADKKL 67 +LL +L + + L + L + G+ + Q +L + I+LLD+ Sbjct: 4 RILLADDHALLRQGIKRVLNFEDDLEVVGEAEDGQEALARTLMLKPDILLLDINMPGLTG 63 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + L + + +KI+ L + Y G + ++ + V G Sbjct: 64 LDVAKQ-LKQARSRVKIIALTIHDSDNYVLELLKNGALGYLLKDVEPNVLIKAIHMVNEG 122 Query: 128 ECYFTQKLASYL---------ITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIAR 178 + KLA L + ++ + LT RE ++L + G SN +I + Sbjct: 123 NPFVYPKLAERLFGTSSISGDVGRMAKEIWDESRGERLTPREMDVLGCIAKGLSNQDIGK 182 Query: 179 SLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 +L +SE TVK HL ++F K+ V +RTQA+ + N Sbjct: 183 ALGLSEKTVKNHLTSVFHKLKVNDRTQALVYVLKN 217 >UniRef50_B1ZY58 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZY58_OPITP Length = 223 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 88/206 (42%), Gaps = 13/206 (6%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLD--DISSGSIILLDMMEADKKL 67 +L++ L+ + + + + + + + +++ D ++L+D+ Sbjct: 21 RVLVVDDHPPMRVGLVALIRSQPGMDVVAEASDGEEAIEIYDDLQPDVVLMDLRMPGMGG 80 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + +K ++++L+T + E + + ++ V G Sbjct: 81 VEAIL-AIRKKAPEARVIVLSTYDWDEDIHRALQSGAKSYLLKDMPIEEIASTVRAVYAG 139 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 + + +A L + + LT RE+++L L G SN EIA SL ISE+TV Sbjct: 140 DTSLPRSVAERLTERAQREQ--------LTERERDVLESLIKGRSNKEIASSLCISEDTV 191 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDN 213 K+HL LF K+ V++RT A A + Sbjct: 192 KSHLKTLFAKLRVRDRTGAAIEAIRH 217 >UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0L7_PELTS Length = 223 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 8/209 (3%) Query: 13 LLLITKSSLQATALLQHLK-QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKLIH 69 LLL+ L +L + + + G+ N + +L I+ ++IL+D+ I Sbjct: 11 LLLVDDDPLVRRSLRMLFELHDINVVGEASNGEEALKAIARLKPTMILMDVNMPKMDGIQ 70 Query: 70 YWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGEC 129 + + +I++++L + + E+++ ++ V G Sbjct: 71 ALK-AIKTNYPDIQVIILTVHNQHEKVVQAIRDGCSAYVLKDSPPEQLIEVVESVAEGRY 129 Query: 130 YFTQKLASYL---ITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 + +A+ L + R + LLT REKE+L + G SN EIA L I+ T Sbjct: 130 FVDTSIANELLVNLVQGTPRRQHPKNLPLLTLREKEVLQLIVNGLSNKEIAGKLNITLRT 189 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWA-NDNL 214 VK H+ ++ K+ V +RTQA A +NL Sbjct: 190 VKAHVSSILMKLNVNDRTQAAVLAIQENL 218 >UniRef50_D2SFS4 Two component transcriptional regulator, LuxR family n=2 Tax=Frankineae RepID=D2SFS4_9ACTO Length = 220 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 98/206 (47%), Gaps = 9/206 (4%) Query: 13 LLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKLI 68 +L++ +L T L L + + G + ++++++ + ++L+D+ + Sbjct: 4 VLVVDDHALMRTGLSGLIAAAGDMRVVGTAADGAEAVEEVARLAPHVVLMDLSMPVLDGV 63 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 + + ++ ++++L+L + D G + ++ ++ RG Sbjct: 64 AATRR-IVEEHPSVEVLVLTSFSDRQRVIEALDAGAGGYVLKDTEPADLLAAIRSTARGH 122 Query: 129 CYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVK 188 ++A ++ R + +A LT RE+E+L + G +N +IAR L I E+TVK Sbjct: 123 SPLDPRVARTVLH----ARRSPVRAAELTEREQEVLALVGHGLANKQIARRLGIRESTVK 178 Query: 189 THLYNLFKKIAVKNRTQAVSWANDNL 214 HL ++F++I V++RT A WA +L Sbjct: 179 AHLTSVFQRIGVRDRTSATLWARTHL 204 >UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MN84_CRYCD Length = 215 Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 44/196 (22%), Positives = 82/196 (41%), Gaps = 6/196 (3%) Query: 22 QATALLQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEA-DKKLIHYWQDTLSRK 78 Q A + + + + + G+ + + + D ++ ++LLD+ + + + +S Sbjct: 15 QGFAFIINSQCDMRVVGEAADGKEAYDLVARVEPHVLLLDISMPPGENGLIAC-ERISCD 73 Query: 79 NNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASY 138 + +I++L E+ Y G E ++ ++ V GE Y +A Sbjct: 74 FPSTRIIILTMFEETDYLFYTLRGGAAGYVLKNSSTEVLLGAIRKVATGETYIEPNMAQA 133 Query: 139 LIT--HSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFK 196 L H + L+ RE EI + L G +N E A LFIS TV+TH ++ Sbjct: 134 LSGKLHGQSGVAEKNPYHELSSREFEIFSLLAQGYTNKEAADKLFISVKTVETHRSKIYA 193 Query: 197 KIAVKNRTQAVSWAND 212 K+ V +R + V A Sbjct: 194 KLGVNSRAELVHLALK 209 >UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomycetales RepID=A4XCA4_SALTO Length = 235 Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 87/208 (41%), Gaps = 9/208 (4%) Query: 13 LLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKLI 68 +L++ L +AL + + + I G+ + ++ ++L+D+ I Sbjct: 5 VLVVDDQPLVRSALRMVVAEVDDMVIAGEAETGEEAVRLTRELKPDVVLMDLRMPGMGGI 64 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 + R + ++L+L T ++ + G + +++ ++ V G Sbjct: 65 EATGQ-IVRLSPETRVLVLTTFDEDDHVFGALQAGAAGFLIKNMSLDDILDAVRTVAHGN 123 Query: 129 CYFTQKLASYLITHSGNYRYNST----ESALLTHREKEILNKLRIGASNNEIARSLFISE 184 + LI H + R T + +T RE+E+L + G SN+EIA L +S Sbjct: 124 GLLAPSVTRRLIKHVVDTRTAPTVPRRPLSGITEREREVLTLVGRGLSNSEIADELRLSH 183 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWAND 212 TVKT++ L K+ ++R V A + Sbjct: 184 ATVKTYITRLLSKLGARDRVHLVIAAYE 211 >UniRef50_D0MHE1 Two component transcriptional regulator, LuxR family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MHE1_RHOM4 Length = 211 Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 94/206 (45%), Gaps = 5/206 (2%) Query: 12 TLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 + L+ ++ A L ++L + G + + + + +IL+D+ D Sbjct: 3 RIALVDDEAIVRDTIAFLLETTENLTLVGSFASAREAQQSLPQCAPDVILVDIGLPDASG 62 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + L + + + L+L +D + +G + E +++ ++ V +G Sbjct: 63 LTLIR-ALRPQLPHAEFLVLTVFDDNQHILEAIQAGASGYLLKRDLPEHLISAIRIVHQG 121 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 + + +A + + + LT RE+E+L+ L G SN EIA L++S TV Sbjct: 122 GSWMSAGVARRALELFRHQLAPAAALQQLTPREQEVLHLLARGLSNAEIAERLYLSIETV 181 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDN 213 +TH+ ++++K+ +NR +AVS N Sbjct: 182 RTHIRHIYRKLQARNRAEAVSRLLQN 207 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 173 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 8/207 (3%) Query: 10 GHTLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRS--LDDISSGSIILLDMMEADK 65 +LL+ L L L + I + + L ++LLD+ Sbjct: 5 NIRILLVDDHPLFRRGLSFLLAQEYGFEIVAEATDGLEGVKLARFHRPDLVLLDVEMPVM 64 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 L + +L+L ED G D + +V ++ + Sbjct: 65 NGPEALAQML-DFQPGLPVLMLTISEDADNLKKCLELGARGYILKNADTDFLVEAIRQAV 123 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 G+ + ++ + +S LT RE+++L + G SN IAR +F+SEN Sbjct: 124 AGQQTVSPEMNN---AGQSIPPEHSAILDSLTQRERDVLRYVAGGISNKMIARRMFLSEN 180 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWAND 212 TVK H+ N+F+K+ + NR +A +A + Sbjct: 181 TVKAHMQNIFRKLNIDNRVRAAVYARE 207 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 173 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 93/211 (44%), Gaps = 8/211 (3%) Query: 9 HGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLD--DISSGSIILLDMMEAD 64 G++L++ +L L L+ L +TG+ + Q ++D D + ++L+D+ Sbjct: 3 EGYSLIIAEDHTLLREGLKSLLQSVPHLIVTGEASDGQMAVDLCDRNQPELVLMDISMPR 62 Query: 65 KKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGV 124 + + + +++ +++L+L Y +G + + ++ V Sbjct: 63 MDGVQATR-LIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESV 121 Query: 125 LRGECYFTQKLASYLITHSGNYRYNSTESA---LLTHREKEILNKLRIGASNNEIARSLF 181 L G+ Y + ++ ++ N + S+ LT RE+EI + G N EIA L Sbjct: 122 LGGKIYLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEMLV 181 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 +S TV+ H NL +K+ V + + + A + Sbjct: 182 VSVKTVEKHRSNLMQKLGVHSAAELRALALE 212 >UniRef50_B2J8J5 Two component transcriptional regulator, LuxR family n=3 Tax=Cyanobacteria RepID=B2J8J5_NOSP7 Length = 211 Score = 173 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 88/212 (41%), Gaps = 13/212 (6%) Query: 5 VHSIHGHTLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDM 60 + + +LL + QA + + + + G + + +L+ + L+D+ Sbjct: 3 MSQSNVIRILLADDHPILGQALTMFLQCESDMTVIGHAGDGREALELFHQHQPDVALMDL 62 Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 + + K + +I++L T + G + +++ Sbjct: 63 RMPKMEGADAIA-AICAKFKHARIVVLTTFDGDEDIYRGLRAGAKGYLLKGAEPNELLDA 121 Query: 121 LQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL 180 ++ V +G+ Y +A+ L S L+ RE E+L + G +N +I+ L Sbjct: 122 IRTVHKGQKYIPPTIAAKLAERMS--------SEELSDRELEVLRLIAKGKNNQQISNVL 173 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 I+E+TV+ H N+F K+ V +RTQA+ A + Sbjct: 174 NIAESTVRFHTNNIFGKLNVSDRTQALVTALN 205 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 173 bits (439), Expect = 3e-42, Method: Composition-based stats. Identities = 46/206 (22%), Positives = 91/206 (44%), Gaps = 9/206 (4%) Query: 12 TLLLITKSSLQATALL--QHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 + ++ + L+ + I G+ N + +L+ + + I+L+D+ + Sbjct: 2 RIFIVDDHPIFREGLIARLSMDDDFVIVGQAANGKEALEKMPNLMPDIVLMDISMPEMNG 61 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + K IKIL+L+ +D Y + G + L+ + G Sbjct: 62 MDA-AEIFKDKFPEIKILILSMHDDKEYVLSVLNRGVRGYALKDISAAEMFYALRVIHNG 120 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 Y+++ ++ L+ S ++ +LT RE+ +L L G +N E+AR L IS T+ Sbjct: 121 GIYYSRAISDLLVQSSQ----EPDKNTVLTTREQTVLRLLASGLNNKELARELDISVRTI 176 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDN 213 +TH N+ K+A+K V +A D+ Sbjct: 177 ETHRRNIKDKLAIKTSAGLVRYAIDH 202 >UniRef50_D1BCA8 Two component transcriptional regulator, LuxR family n=18 Tax=Bacteria RepID=D1BCA8_SANKS Length = 234 Score = 173 bits (439), Expect = 4e-42, Method: Composition-based stats. Identities = 46/205 (22%), Positives = 91/205 (44%), Gaps = 11/205 (5%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 +++ + ++ L + + + G+ + ++++D S +++ D+ Sbjct: 30 RVVVADDHPVVRAGIVGMLGVESDIEVVGEAEDGRQAVDLARTLSPDVVITDLRMPVLDG 89 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + ++ + +++++L T E G + +V G++ RG Sbjct: 90 VGATRE-IVALPGTVRVVVLTTYETDGEILRAVEAGATGYLLKDTPRAELVAGIREAARG 148 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 + T +A+ L++ G + + LT RE E+L + G SN + LFISE TV Sbjct: 149 QTVLTPSVATRLVSQVG------SRADRLTPREVEVLRAVARGLSNAAVGHELFISETTV 202 Query: 188 KTHLYNLFKKIAVKNRTQAVSWAND 212 KTHL F K+ V +RT AV+ A D Sbjct: 203 KTHLIRAFGKLGVNDRTHAVTVATD 227 >UniRef50_C4DM40 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DM40_9ACTO Length = 221 Score = 173 bits (439), Expect = 4e-42, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 86/210 (40%), Gaps = 9/210 (4%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 L++ L AL L + + + + + + +L I S ++LLD+ Sbjct: 5 RLVVADDQKLIRMALSTLAAGEPDIELVAEAADGKAALTAIRDHSPDVLLLDIRMPIMGG 64 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + + + ++++++ T + Y G D E +++ ++ V G Sbjct: 65 LEVLRHIETDPDATVRVIMMTTFDIDQYVFESLEHGAAGFLTKDTDPEFILHAVRVVAAG 124 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESA-----LLTHREKEILNKLRIGASNNEIARSLFI 182 E + + +I R+ T LT RE EIL + G SN+EIA L + Sbjct: 125 ESLLSPGVTRRVIDRFTRGRHARTGEPHPGLDSLTARETEILGWVATGLSNDEIAERLVV 184 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 S TV+TH+ K+ ++R Q V A Sbjct: 185 SPATVRTHVGRAMMKLRARDRAQLVVIAYR 214 >UniRef50_C1I7X4 Two-component system response regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I7X4_9CLOT Length = 226 Score = 173 bits (438), Expect = 5e-42, Method: Composition-based stats. Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 9/210 (4%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +++ +L L + ++ L I G+ + + L+++ + +ILLD+ K Sbjct: 7 RTIVVDDHALIREGLNRIISFEEDLIICGQFRSGEELLNNMKNYNPDVILLDINMPGKNG 66 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + TL +IK+++L D + +VN ++ V G Sbjct: 67 IETLK-TLKILYPDIKVVMLTVENDKKTIMESIDIGADAYILKESAGSEIVNAIRNVYLG 125 Query: 128 ECYFTQKLASYLI----THSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 E Y + L + + LLT+RE IL ++ G N EIA LF+S Sbjct: 126 EKYIDKSLIKAIFLDIKSDVACKNKEIESLKLLTNRELNILYEISKGLKNKEIAEKLFLS 185 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 E TVK ++ ++FKKI V++R QA +A N Sbjct: 186 EKTVKNYITSIFKKIEVEDRVQATIYAIRN 215 >UniRef50_D2PZY5 Two component transcriptional regulator, LuxR family n=2 Tax=Actinomycetales RepID=D2PZY5_9ACTO Length = 252 Score = 173 bits (438), Expect = 5e-42, Method: Composition-based stats. Identities = 44/226 (19%), Positives = 85/226 (37%), Gaps = 25/226 (11%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +L+ + T L L + L + + + +L I ++L+D+ Sbjct: 12 RVLVADDQGVIRTGLAMILDHEPDLTTVAQAGDGEEALRLIDRFDPDVVLMDIRMPVMDG 71 Query: 68 IHYWQDTLSRKNNNIK----ILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + + + +L+L T +D Y +G D + +V ++ Sbjct: 72 LVATERITRANQEAGRSRPAVLVLTTFDDEAYVLSAVRAGASGFLLKDTDPDLLVAAVRA 131 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTESAL-----------------LTHREKEILNK 166 V RG+ L+ + L+ RE+++L Sbjct: 132 VHRGDSLVDPASTRVLLERCVELERQVGADPVAAAPHAADGRWTGLLAQLSERERDVLVW 191 Query: 167 LRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 + G SN ++A LF+SE TVKTH+ ++ K+ + +R QAV A + Sbjct: 192 MARGLSNRDLANKLFVSETTVKTHVSSVLSKLGLSSRVQAVVVAYE 237 >UniRef50_C1YU02 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1YU02_NOCDA Length = 218 Score = 173 bits (438), Expect = 5e-42, Method: Composition-based stats. Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 5/203 (2%) Query: 15 LITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADKKLIHY 70 L+ +L L L + + + +TG+ + D + + ++L+D+ I Sbjct: 6 LVDDEALIRAGLAALINAEDDMRVTGQADDGADVPDLVRRTRPDLVLMDVRMPRLDGIQA 65 Query: 71 WQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECY 130 + + + ++++L T ++ Y +G E ++ ++ RG+ Sbjct: 66 TRTLHTTLTHPPRVIVLTTFDNDDYVWGALRAGAHGFLLKRTPPEDILAAIRLAHRGDTL 125 Query: 131 FTQKLASYLITHSGNYRYNSTESAL-LTHREKEILNKLRIGASNNEIARSLFISENTVKT 189 +L + + LT RE + L + G +N EIA LF+ TVKT Sbjct: 126 LFPTALRHLAATQPAAPTPAARAVATLTQRESQTLTLMAQGLTNAEIADRLFLGTETVKT 185 Query: 190 HLYNLFKKIAVKNRTQAVSWAND 212 H+ ++ K+ V++RTQAV A D Sbjct: 186 HVSHILTKLGVRDRTQAVIAAYD 208 >UniRef50_C1B8T3 NarL family two-component response regulator n=61 Tax=Bacteria RepID=C1B8T3_RHOOB Length = 276 Score = 173 bits (438), Expect = 5e-42, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 82/200 (41%), Gaps = 12/200 (6%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMM-EADKK 66 LLL ++ L L + + + G+ ++ + ++L+D+ Sbjct: 3 RLLLADDHAIVRAGLRALLEHEDDIEVVGEAATADAAVALCATTPVDLVLMDLRFGPGTS 62 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + ++ S N +L++ + G ++ ++ Sbjct: 63 GVDATRNLRSLPNPP-HVLVVTNYDTDADILDAVAAGAAGYLLKDTPPPELLAAVRAASA 121 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 G+ + +AS L+T + L+ RE ++L + G SN EI + LF+SE T Sbjct: 122 GDSVLSPAVASKLMTRVRRPATS------LSPREIQVLTLVAAGRSNREIGKELFLSETT 175 Query: 187 VKTHLYNLFKKIAVKNRTQA 206 VK+HL ++F K+ VK+RT A Sbjct: 176 VKSHLVHIFGKLGVKSRTSA 195 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 172 bits (437), Expect = 6e-42, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 88/206 (42%), Gaps = 5/206 (2%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +L++ +L + L L ++ + + G+ + + ++LLD+ + Sbjct: 5 KVLIVDDHTLMRSGLRLMLSAQEDIEVVGEAADGSGGIAMAQKMRPDVVLLDISMPEMSG 64 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + L+ + +++++LL ED Y G + + ++ V G Sbjct: 65 LECLKTLLANQ-PDLRVILLTMHEDARYVKEGFALGAMGYVLKKAADDVLYQAVRAVYSG 123 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 E Y + ++ L+ +EK++L+ + G +N EIA L IS TV Sbjct: 124 EMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQLVISVKTV 183 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDN 213 +T+ Y + +K+ K R+ V +A DN Sbjct: 184 ETYKYRIMEKLNCKKRSDLVKFALDN 209 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 172 bits (437), Expect = 7e-42, Method: Composition-based stats. Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 13/212 (6%) Query: 13 LLLITKSSLQATALLQHLKQS--LAITGKLHNIQRSLDDISS--GSIILLDMMEADKKLI 68 +LL+ ++ + LK I G+ N ++ + ++++D+ + I Sbjct: 6 ILLVDDHTIVRDGIKATLKDQKNFHIVGEAANGLDGIEAVKQLKPDVVIMDITMPEMSGI 65 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 D +S+K + K+L+L+ ++ Y G D++ + + V G+ Sbjct: 66 EA-ADVISKKYPDSKVLILSMHDNETYILKSVEAGAYGYLLKDVDKDEFIKAITAVYNGD 124 Query: 129 CYFTQKLASYLITHSGNYRYN--------STESALLTHREKEILNKLRIGASNNEIARSL 180 YF ++S L++ + S + LT REK IL + G +N EIA L Sbjct: 125 KYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNNREIADGL 184 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 IS T++TH N+ KK+ VKN + V A D Sbjct: 185 GISIRTIETHRANIMKKLKVKNAVELVRIAID 216 >UniRef50_UPI0001789C57 two component transcriptional regulator, LuxR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C57 Length = 225 Score = 172 bits (437), Expect = 7e-42, Method: Composition-based stats. Identities = 49/214 (22%), Positives = 92/214 (42%), Gaps = 14/214 (6%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 ++L L + +++ + + G+ + ++D I+L+D+ Sbjct: 8 RIVLADDQPFIRKGLRYILDIQKDMQVIGEAMTGEEAVDITLRNVPDIVLMDIRMPGGTG 67 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + +++ N K++LL T + Y +G + + +++G++ + RG Sbjct: 68 IMATK-SIAEALPNTKVVLLTTFDVEQYVFDGIRAGASGYLLKDTETDELLSGIRAMHRG 126 Query: 128 ECYFTQKLASYLITH---SGNYRYNSTESA------LLTHREKEILNKLRIGASNNEIAR 178 F A + SG +S LT RE E+L L G N+EI+ Sbjct: 127 ATLFNSSTAKRALDQILTSGMQEPDSDSPGKDRLLGALTERETEVLQLLAYGKRNHEISA 186 Query: 179 SLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 L ISE T KTH++++ +K+ +RTQAV A Sbjct: 187 ILCISEGTTKTHIHHIMQKLGALDRTQAVVTAIR 220 >UniRef50_B5JPJ0 Sigma-70, region 4 family n=3 Tax=Verrucomicrobiales RepID=B5JPJ0_9BACT Length = 213 Score = 172 bits (436), Expect = 8e-42, Method: Composition-based stats. Identities = 42/205 (20%), Positives = 87/205 (42%), Gaps = 5/205 (2%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADKKL 67 + ++ +L + +L+ S+ + + +L + + ++L+D+M Sbjct: 7 KIAIVEDQDTTRESLEAIINLEHSMECILTCSSGEEALSKLPKARPDVVLMDIMMPYMTG 66 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I L I+I+++ +D G E+V ++ RG Sbjct: 67 IE-CASKLKDLMPEIEIVMITVYQDPDLIYSALRAGACGYLLKRSTPEQVTTAIRDAKRG 125 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 + ++A +I++ S++ L++RE+E+L + G +N EIA L ++ TV Sbjct: 126 GMPMSVEVARRVISYFRQEAQVSSDVDSLSNREREVLEFVAQGFTNKEIAAKLSVTPETV 185 Query: 188 KTHLYNLFKKIAVKNRTQAVSWAND 212 HL N +KK+ V+ RT+A Sbjct: 186 HWHLKNCYKKLHVRTRTEAAMKLRQ 210 >UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteria RepID=Q8YV43_ANASP Length = 209 Score = 172 bits (436), Expect = 8e-42, Method: Composition-based stats. Identities = 43/205 (20%), Positives = 85/205 (41%), Gaps = 13/205 (6%) Query: 12 TLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 +L+ ++ Q A + + + + + N ++ + + L+D+ + + Sbjct: 8 RVLIADDHAIFRQGLATIINRDPEMQVVAQAENGEQVIALFEEHQPDVTLMDLRMPEVEG 67 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + + +I++L T + G + + ++N ++ V RG Sbjct: 68 VAAIS-AICATAKSARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHRG 126 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 Y + + L+ N L+ RE E+L L G SN +IA +L I E TV Sbjct: 127 HKYIPPDVGAKLVQRLSNPE--------LSERELEVLRSLAQGMSNADIADALSIGEGTV 178 Query: 188 KTHLYNLFKKIAVKNRTQAVSWAND 212 K+H+ + K+ V +RTQAV A Sbjct: 179 KSHVNRILNKLDVSDRTQAVIVAVK 203 >UniRef50_C8UTK6 Two-component response regulator n=39 Tax=Bacilli RepID=C8UTK6_LACRG Length = 203 Score = 171 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 14/206 (6%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 TL L S+ +AL L +L+ L + G + + I S + +LD+ Sbjct: 4 TLYLAEDQSMLNSALSQLLNLEDDLTVIGSAQDGATAWQAIQSQPPDVAILDIEMPKMTG 63 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + K+++L T Y +NG + ++ ++ V+ G Sbjct: 64 LDVADQIHTHALP-TKVIILTTFAQKVYFQRAIAAQVNGYLLKDSPSDDLIAVIRKVMTG 122 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 + + +L + ++T ES LT RE +L ++ G S+ +IA SLF+SE TV Sbjct: 123 QTVYAPELVANMVT---------AESNPLTERELAVLGEVASGLSSKQIAASLFLSEGTV 173 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDN 213 + +L +F K+ V NR +A+ A N Sbjct: 174 RNYLSAIFSKLGVHNRIEAIEMAKRN 199 >UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67JS2_SYMTH Length = 211 Score = 171 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 84/206 (40%), Gaps = 5/206 (2%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +L++ L L L ++ + + G+ + ++ S +++LD D Sbjct: 4 RVLIVDDHELLREGLKSLLSREEDMEVVGEAAGGREAVALCRSLRPDVVVLDARLPDVDG 63 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + L + + +L+L T D G + ++ V RG Sbjct: 64 VEVCRQ-LQEEMPEVAVLMLTTFSDSDLVLGAVRAGARGYVVKDVLGMDLKRSIRAVARG 122 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 E K+ YL+ + + E L ++ I+ + G +N EIA +F+SE TV Sbjct: 123 EVAMDPKVVGYLMQQMRSPSADKEERIPLNRQQLAIIRLVAQGYTNREIAERMFLSEKTV 182 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDN 213 K +L +++ VKNR +A A+ N Sbjct: 183 KGYLAEAMRRMGVKNRVEAAMVASKN 208 >UniRef50_C7PPD5 Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PPD5_CHIPD Length = 222 Score = 171 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 46/203 (22%), Positives = 93/203 (45%), Gaps = 6/203 (2%) Query: 12 TLLLITKSSLQATA--LLQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEAD-KK 66 ++ ++ + TA LL + A G +N + +++ I S +++L+D Sbjct: 17 SVAIVEDNHDIRTAMELLINGSDGYACIGAFNNAETAVEQIPSLLPNVVLMDFNLPGGMN 76 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I L + ++ ++L ED +G +++ ++ + Sbjct: 77 GIECIAR-LKGEYPDMHFMMLTVYEDDDKIFQALEAGASGYILKKTPPSELLSAIRDLHE 135 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 G + ++A ++ + + LT REKEIL++L G EIA +LFIS T Sbjct: 136 GGSPMSSQIARRVVAYFQKQAKPNPALEALTSREKEILDQLSKGFLYKEIASNLFISIET 195 Query: 187 VKTHLYNLFKKIAVKNRTQAVSW 209 V+ H++N+++K+ V++RT AV+ Sbjct: 196 VRRHVHNIYEKLHVRSRTDAVNK 218 >UniRef50_A5URU4 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexi (class) RepID=A5URU4_ROSS1 Length = 242 Score = 171 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 16/216 (7%) Query: 12 TLLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRS--LDDISSGSIILLDMMEADKKL 67 +L+I L + L++ + + G+ N Q + L + ++L+D+ Sbjct: 6 RVLIIDDHPLFRQGIRWSLEEAGDMEVVGEAENGQEAIKLAERLVPDVVLVDINLPGLNG 65 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + + R+ I +++++ ED +V ++ V RG Sbjct: 66 LEVAR-VIKRREPRIGLIVISVYEDDDQLFQAIKVGAAAYSSKDVHPRDLVRMIREVARG 124 Query: 128 ECYFT------QKLASYLITHSGNYRYNSTES-----ALLTHREKEILNKLRIGASNNEI 176 + +A+ ++ E A LT RE EIL+ + G SN EI Sbjct: 125 KYLINDSVIAKPHVATRVLHQFRELAATEDERTSALFAPLTSREIEILDCIARGLSNKEI 184 Query: 177 ARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 A L IS TVK H+ ++ K+ V +RT AV +A Sbjct: 185 ASQLSISGQTVKNHITSILSKLQVNDRTMAVIYAIQ 220 >UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR family n=10 Tax=Bacteria RepID=Q1IXN1_DEIGD Length = 221 Score = 171 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 88/206 (42%), Gaps = 9/206 (4%) Query: 12 TLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLD--DISSGSIILLDMMEADKKL 67 +LL+ ++ Q L L + + G+ N + +L + ++++D+M Sbjct: 11 RVLLVDDHAVVRQGLRLFLSLDSQIEVVGEAANGEEALAAAERLHPDVVIMDLMMPVMDG 70 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + L R++ + +++ L + + + G + + + + RG Sbjct: 71 IQATR-LLRRQHPDTEVIALTSTLEEHKVNGAIDAGAMGYMLKDASSDTLADAIHAAARG 129 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 E + A L+ T LT +E +L + G SN +IAR ++E TV Sbjct: 130 EVRLHPEAARRLVRDFRTPEMRET----LTPKEVIVLQLIARGYSNRDIARDQGVTEATV 185 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDN 213 KTH+ L K+ +++RTQA +A + Sbjct: 186 KTHVSRLLGKLGLESRTQAALYALRH 211 >UniRef50_B8GUD1 Two component transcriptional regulator, LuxR family n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GUD1_THISH Length = 227 Score = 171 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 7/211 (3%) Query: 12 TLLLITKSSLQATALLQHLKQ-SLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKLI 68 +LLI +L L + LK+ + G + + + +D +ILLDM + Sbjct: 4 RVLLIDDHTLFREGLQELLKRHGIDTVGAVGDGETGIDLARDLLPDVILLDMRMPAMNGL 63 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 + L + + I++L T + G + +V+ L+ +L+G+ Sbjct: 64 EVLRR-LRQAGLKMPIVMLTTSTEEQDLVECLRNGAQGYLLKEMEPGDLVDALEEILQGK 122 Query: 129 CYFTQKLAS---YLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 LA ++ + + LT RE EIL L G SN IAR+L IS+ Sbjct: 123 TVVAPDLAQLLVRVVQGKSSSANEPSPFDELTPREGEILALLAEGQSNKVIARNLGISDG 182 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWANDNLRR 216 TVK H+ + +K+ V +R +A A R Sbjct: 183 TVKLHVKAILRKLGVHSRVEAAVLAVQQGLR 213 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 84/204 (41%), Gaps = 11/204 (5%) Query: 13 LLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKLI 68 +L++ +L + L+ + + G + + +L ++ ++L+D+ I Sbjct: 8 VLVVDDHTLHRDGTRRILEQYDDVDVVGDAASGEDALAMVNRLHPRVVLMDIRLPGMNGI 67 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 + + ++ + ++L++ +D Y G +V ++ V G Sbjct: 68 EATRR-IRERHPDTRVLIVTAYDDEEYVRGAFDVGAAGYLSKTAPGRELVEAVRAVAGGN 126 Query: 129 CYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVK 188 L + L+ S+ + LT RE+ +L L G N +IA L IS TV+ Sbjct: 127 SVLQPTLMAALLA------KRSSPANTLTDRERAVLRLLAEGMHNKQIASRLGISARTVE 180 Query: 189 THLYNLFKKIAVKNRTQAVSWAND 212 H ++ K+ V +RT+AV A Sbjct: 181 RHCDRIYGKLGVTSRTEAVVRAIS 204 >UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmicutes RepID=VRAR_STAA1 Length = 209 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 91/206 (44%), Gaps = 8/206 (3%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADKKL 67 +L + + + +L + + + G+ + + ++ +IL+D++ D Sbjct: 4 KVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDMDG 63 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + + IK+L+L + + ++ + + + ++ RG Sbjct: 64 VEATTQ-IKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTSRG 122 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 E F ++ L+ + + +LT RE EIL + G SN EIA + I+ TV Sbjct: 123 ESVFEPEV---LVKMRNRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIKTV 179 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDN 213 KTH+ N+ K+ V++RTQAV +A + Sbjct: 180 KTHVSNILSKLEVQDRTQAVIYAFQH 205 >UniRef50_B2A7N5 Two component transcriptional regulator, LuxR family n=5 Tax=Firmicutes RepID=B2A7N5_NATTJ Length = 232 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 49/223 (21%), Positives = 92/223 (41%), Gaps = 26/223 (11%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +++ ++ A +L + L+ + + N + +L+ IIL+D+ Sbjct: 5 KVMIADDQTILADSLKTIIDLEDDMEVVAVSSNGEETLEISEKLLPDIILMDIRMPKMDG 64 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + L K IKI++L T + Y +G D +++++ ++ Sbjct: 65 VECTK-KLKEKYPEIKIIILTTFDHDEYIVDALSYGASGYLLKDIDGDKLISSIRDAYND 123 Query: 128 ECYFTQKLASYLITHSGNYRYNSTES---------------------ALLTHREKEILNK 166 + +A+ LI N + T+ LT RE EI Sbjct: 124 KLLIPTSIAAKLIGKIDNRKQQPTDDHKDEPLKSQDRKESQKEINLYEELTQREIEIAQL 183 Query: 167 LRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSW 209 + G SN +IA LFI++ TVK ++ N++ K+ VK RT AV + Sbjct: 184 MVAGLSNKKIAEKLFITQGTVKNYITNIYSKLGVKERTSAVLY 226 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 89/212 (41%), Gaps = 12/212 (5%) Query: 12 TLLLITKSSLQATA--LLQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMME-ADKK 66 +++ ++ T ++ + ++ + + + + + +++LD+ + Sbjct: 2 KIVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEHRPDVLILDLSMPPGES 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + +S + KIL+L +D Y G E+++ ++ V + Sbjct: 62 GLIATS-KISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVRTVYQ 120 Query: 127 GECYFTQKLASYLITHSGNYRY------NSTESALLTHREKEILNKLRIGASNNEIARSL 180 GE Y KL + L+ N +S +L+ RE EIL + G N +IA L Sbjct: 121 GETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDIAEKL 180 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 F+S TV+ H ++ K+ +K++ + V +A Sbjct: 181 FVSVKTVEAHKTHIMTKLNLKSKPELVEYALK 212 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 84/206 (40%), Gaps = 9/206 (4%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 ++L+ + L +L + + + + + + L ++++D++ Sbjct: 5 RVMLVDDHEMVRLGLKSYLNLQPDVEVVAEASDGEEGLAKALEVKPDVVVMDLVMPKMTG 64 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + L + +I++L + D G + ++ ++ V G Sbjct: 65 VEATLALLK-EWPQAQIVILTSYLDNEKIYPVLEAGARGYMLKTSSADEILAAIRKVALG 123 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 E ++ + H + + LT RE+EIL L G N IA FIS TV Sbjct: 124 EYAIETEVEKKVEHH----KRHPDLHDDLTAREREILTLLAKGYDNQRIADESFISLKTV 179 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDN 213 KTH+ N+ K+AV +RTQAV +A + Sbjct: 180 KTHVSNILSKLAVSDRTQAVVYAFQH 205 >UniRef50_C2RNB5 Two-component protein Kinase n=1 Tax=Bacillus cereus BDRD-ST24 RepID=C2RNB5_BACCE Length = 304 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 46/209 (22%), Positives = 90/209 (43%), Gaps = 9/209 (4%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 L ++ S +L + + L + G + +++L+ ++L+D+ + Sbjct: 92 RLCIVDDHSFIRESLHTILSGLEDLQVVGMAEDGEQALELCGRLKPDVVLMDLEMPNLDG 151 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 IH + + ++ I++L+L+T ++ +G D + ++ V RG Sbjct: 152 IHATK-MIKKRWPEIRVLILSTFQNTERAKEIIRNGADGYVLKSIDSRELAESIRLVYRG 210 Query: 128 ECYFTQKLASYLITHSGN----YRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 T L + + + L+ RE EIL L G+ IA +L++S Sbjct: 211 GAMITHDLFHRMWEENKETGLFESRSDGIEYGLSKRELEILELLSQGSRYKTIASTLYLS 270 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 TV+ + NL++K+ VKNR +AV A D Sbjct: 271 NGTVRNYASNLYEKLGVKNREEAVQKAKD 299 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 11/206 (5%) Query: 12 TLLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +L++ + A + L+ + + G + + + ++ + +IL+D+ D Sbjct: 25 RVLIVDDHPMVAEGIQSILESYGDIEVVGAVSSGREAIARAEALVPDVILMDLNMPDVGG 84 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + + + I++L+L+ + Y G E + + V+RG Sbjct: 85 LSAT-EIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTAIDAVMRG 143 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 E Y A L S R LT RE+ IL +L G SN E+A++L IS TV Sbjct: 144 EQYLCTGAAGSLSPQSQTSR------EALTGREQTILLELAQGKSNKEVAQALDISVRTV 197 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDN 213 +TH N+ +K+ + + +A ++ Sbjct: 198 ETHRKNIKRKLGISSTAGLTRYALEH 223 >UniRef50_C4DCK3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=3 Tax=Actinomycetales RepID=C4DCK3_9ACTO Length = 214 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 41/207 (19%), Positives = 81/207 (39%), Gaps = 7/207 (3%) Query: 12 TLLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRS--LDDISSGSIILLDMMEADKKL 67 +LL+ L L + + + G+ Q + L ++L+D+ Sbjct: 3 RVLLVDDQRLIRAGLRMLCEPAADIEVVGEADGGQAAVRLAGELCPDLVLMDLRMPGMDG 62 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I Q L+ + + +++ L T +D + G ++ ++ G Sbjct: 63 ITATQRILAER-PSTRVVALTTFDDDDHLYPALAAGACGFLVKDTSPNELLEAIRKAADG 121 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESAL--LTHREKEILNKLRIGASNNEIARSLFISEN 185 + F+ + ++ + R + + L LT RE+E+L + G +N +IA L + Sbjct: 122 DTPFSAGVVKRIVDSAVRARASVPTATLPKLTTREREVLALVGAGYANVDIAERLHLGVT 181 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWAND 212 TVKTH+ +L K NR + A Sbjct: 182 TVKTHIASLMTKTGCSNRVRLAVLAVR 208 >UniRef50_Q06YY8 Two-component system response regulator n=2 Tax=Streptomyces RepID=Q06YY8_9ACTO Length = 223 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 84/212 (39%), Gaps = 10/212 (4%) Query: 12 TLLLITKSSLQA---TALLQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 +LL ++ + + + G+ + ++ + L+D+ Sbjct: 4 KVLLADDQAMIRRGPCGSSWRTSRDITVVGEAEDGAEAIAMARRLRPDVCLVDIRMPKLD 63 Query: 67 LIHYWQDTL-SRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 I + + + ++++++ T + Y G ++ ++ Sbjct: 64 GIEVTRALAGPKAADPMRVIVVTTFDLDEYVYGALRGGAAGFVLKDAGPALLIEAVRAAY 123 Query: 126 RGECYFTQKLASYLITH----SGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLF 181 GE + + L+ H R + S+ L+ R E++ + G +N EIA LF Sbjct: 124 NGEALVSPSVTLRLLKHLNESQAMPRGGAARSSELSGRALEVVRAIARGRTNQEIAAELF 183 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 IS +TVK+HL + K+ V+NRT+ WA +N Sbjct: 184 ISLSTVKSHLSGIQTKLGVRNRTEIAVWAWEN 215 >UniRef50_Q1QSA8 Transcriptional regulator, LuxR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QSA8_CHRSD Length = 238 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 113/210 (53%), Gaps = 3/210 (1%) Query: 7 SIHGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQRS-LDDISSGSIILLDMMEADK 65 S+ +L++T + Q+ + +++Q L + Q S + ++LLD D+ Sbjct: 13 SLENARVLMVTDCNPQSQLFIDYVRQQLDCQVSALSTQESFVPPADRKVVVLLDADHVDE 72 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 +H W ++ + ++ + + N +D ++ H+ GVFY ++ + G+ +L Sbjct: 73 NCMHLW-NSRASESPEMILAAFNLRDDEHAAELLISLHLQGVFYRQDNLLLICKGIAKLL 131 Query: 126 RGECYFTQKLASYLITHSGNYRYNS-TESALLTHREKEILNKLRIGASNNEIARSLFISE 184 G+ + ++ L + LI + N+ LTHRE EI+ L GASN EIA LF+SE Sbjct: 132 EGDLWMSRNLMTRLIDFYRRQQLNAYRPVCGLTHRELEIIGLLGTGASNTEIADQLFVSE 191 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 +TVK+HLYN+F+KI V NR QA++WA NL Sbjct: 192 HTVKSHLYNIFRKIKVHNRIQAMNWARQNL 221 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 170 bits (432), Expect = 2e-41, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 87/211 (41%), Gaps = 11/211 (5%) Query: 12 TLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLDDISSG-------SIILLDMME 62 +LL +L + L+ + L + G+ + +++ + + +LD+ Sbjct: 29 RILLADDHALVRRGVRLILDGEPDLWVVGEAGDGAEAIEQVRRRAGTPQEVDLAVLDVAM 88 Query: 63 ADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 + ++ LSR ++IL+L ++ Y G +V + Sbjct: 89 PRMTGLQAARE-LSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLVQACR 147 Query: 123 GVLRGECYFTQKLASYLIT-HSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLF 181 +RGE + S LI + R LT RE+EIL + G S+ EIA +LF Sbjct: 148 AAVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIADTLF 207 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 IS TV+ H N+ K+ +K+R + +A Sbjct: 208 ISVKTVERHRANILAKLGMKDRLELTRYAIR 238 >UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridium RepID=C5RGJ7_CLOCL Length = 220 Score = 170 bits (432), Expect = 2e-41, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 87/211 (41%), Gaps = 15/211 (7%) Query: 13 LLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKLI 68 +++ + + ++ L + + G+ N + ++ + + +IL+D+ + Sbjct: 4 VIIADDQKIVREGIKMILSLYDEINVIGEAENGEELINLLQNFMADVILMDVRMPIIDGV 63 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 + + + + K+++L T + Y +G E ++N ++ V G Sbjct: 64 EATK-IIKERYIHTKVIILTTFNEDEYIFKAIKNGADGYLLKDVGSEFIINAIRSVYNGA 122 Query: 129 CYFTQKLASYLITHSGNYRYNSTESAL----------LTHREKEILNKLRIGASNNEIAR 178 ++ ++ + S S LT RE ++ + G SN +I R Sbjct: 123 MLLDPEVTVKVVKAFNSITNESKNSNEFDNINNKLNSLTPREIDVAKLVAQGKSNKDICR 182 Query: 179 SLFISENTVKTHLYNLFKKIAVKNRTQAVSW 209 SLF++E TVK ++ + K+ + +RT+ + Sbjct: 183 SLFLTEGTVKNYVTRILGKLELNSRTELAVF 213 >UniRef50_C5VAN3 Two component transcriptional regulator, LuxR family n=2 Tax=Corynebacterium matruchotii RepID=C5VAN3_9CORY Length = 215 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 44/207 (21%), Positives = 83/207 (40%), Gaps = 6/207 (2%) Query: 12 TLLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 +++ +L L L+ + + G+ + +L ++ +D+ Sbjct: 6 RVVIADDEALIRAGLATILQASGDIEVIGEASTGEEALTVAQRLQPDVVCMDIRMPGGDG 65 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + + + ++++ T + Y G+ +V G++ G Sbjct: 66 LEATRR-IQQLEPAPAVIVITTFDMDEYVFGALEAGACGILLKDSSMTDLVEGVRRAALG 124 Query: 128 ECYFTQKLASYLITHSGNYRYN-STESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 E L +I + ++ S +LT RE + + +L G SNNEIA +LF+ +T Sbjct: 125 EGLVDASLTRRVIAEFTRRKSIFTSSSEVLTPRELDCVAQLCQGMSNNEIATTLFLEPST 184 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDN 213 VKTHL + K NR Q V WA N Sbjct: 185 VKTHLSSAMAKTGTHNRVQLVIWAFRN 211 >UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria RepID=C1F9F6_ACIC5 Length = 213 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 43/205 (20%), Positives = 78/205 (38%), Gaps = 13/205 (6%) Query: 12 TLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 +L++ + Q L + + + + ++ I ++D+ Sbjct: 11 RILVVDDHHIVRQGLVALLNTLPGFEVIAEAGDGVEAIALHREHQPDITIMDLRLPRMNG 70 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + ++ +I++L T + G D + + ++ V G Sbjct: 71 VEAITR-IREESPGARIVVLTTFDGDEDIYRALQAGARGYLLKGMDADDLTAAIRSVHAG 129 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 + +A L + LT RE ++L + G SN EIA L ISE TV Sbjct: 130 KSRIPTVVAERLAERMSG--------SELTARELDVLRLIVQGRSNREIAADLHISEATV 181 Query: 188 KTHLYNLFKKIAVKNRTQAVSWAND 212 KTH+ NL K+ V +RTQA + A Sbjct: 182 KTHINNLLSKLGVSDRTQAATTALQ 206 >UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR family n=2 Tax=Frankia sp. EAN1pec RepID=A8L9Z7_FRASN Length = 218 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 42/205 (20%), Positives = 84/205 (40%), Gaps = 5/205 (2%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +LL L L L L + G+ + ++++D + ++L+D+ Sbjct: 9 RVLLADDHRLVLDGLSALIDSVDGLTVVGEATSGEQAVDLAGTEHPDVVLMDIEMPGIGG 68 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + + + I +++L + + G Q+ VV + V RG Sbjct: 69 VEATRRITTAQ-PTIAVVMLTMYGEDEFVFAALRAGARGYLLKGAQQKDVVRTIGAVARG 127 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 + F +A ++ + + LT RE+E+L+ L G N+ IAR L ++ TV Sbjct: 128 DAVFGPDVAHRVLRTFTSPPAENAPFPELTEREREVLSLLANGWPNSRIARHLQLTPKTV 187 Query: 188 KTHLYNLFKKIAVKNRTQAVSWAND 212 ++ N+ K+ +RT A+ A Sbjct: 188 ANNVSNILAKLHAPDRTAAILRARR 212 >UniRef50_A8L3K7 Two component transcriptional regulator, LuxR family n=16 Tax=Actinomycetales RepID=A8L3K7_FRASN Length = 244 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 79/202 (39%), Gaps = 5/202 (2%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 + ++ + L Q L + + G+ +L I + + +LD D Sbjct: 37 RVFVLDDHEIVRNGLRQTLARHDDIEVVGEAGLAAEALRRIPALHPHVAVLDGRLPDGSG 96 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I ++ S ++ L+L + +D G +V ++ V G Sbjct: 97 IDVCREVRSAL-PDVACLILTSYDDDEALFSAIMAGAAGYVLKEIRGNDLVGAIRTVASG 155 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 + + ++ + A L RE+EIL + G +N +I L +SE TV Sbjct: 156 QSLLAPSVTRRVLERLRDGPSEDPAMATLNQREREILQLIADGLTNRQIGTRLGLSEKTV 215 Query: 188 KTHLYNLFKKIAVKNRTQAVSW 209 K ++ ++ +K+ + +RTQA + Sbjct: 216 KNYVSSILEKLGLASRTQAAVY 237 >UniRef50_B9XB02 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XB02_9BACT Length = 211 Score = 170 bits (431), Expect = 3e-41, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 88/207 (42%), Gaps = 6/207 (2%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 T+ ++ + ++ + + + + +L ++ +IL+D+ Sbjct: 6 TVSIVDDQQDIRENIAGYVGGTKGFSCLSSYASAEEALPKLAKDKPDVILMDINLGGMSG 65 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + L K +I++L ED +G ++++ ++ V G Sbjct: 66 IECVRQ-LKPKIPTTQIVMLTVFEDTEKIFSALAAGASGYLLKRMPPSKLLDAIREVNEG 124 Query: 128 ECYFTQKLASYLITHSGNYRYN-STESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 + +A ++ R ++A L+ RE+E+L L G + +IA L +S +T Sbjct: 125 GSPMSAPIARKVVESLQATRPPKPDDTAELSPREREVLEGLAEGCAYKQIADKLGVSIHT 184 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDN 213 V+ ++ +++K+ V++ +QAV+ + Sbjct: 185 VRNYIRRIYEKLHVRSSSQAVARYYRH 211 >UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B0G6_SYNWW Length = 213 Score = 170 bits (431), Expect = 4e-41, Method: Composition-based stats. Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 7/207 (3%) Query: 11 HTLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSL--DDISSGSIILLDMMEADKK 66 +++ L L L L ++ + ++ + Q ++ II++D+ Sbjct: 4 ARVVIADDHVLVREGLRKLLELDSNIKVIDEVGDGQGAINIARKEKPDIIIMDVNMPGTD 63 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I + + R+ +++I+ L E D+ + +V+ + V+ Sbjct: 64 GIVATR-VIKRELPSVRIIALTVYEGEEVVDM-VKAGASAYILKDVAGSELVDTIHRVMN 121 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 GE ++A+ L+ +E LT REK++L L G +N E+A +FISE T Sbjct: 122 GEVVIYPRVANRLVRELRQSENRKSEI-RLTKREKDVLTLLVKGNTNKEMAEVMFISEKT 180 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDN 213 VK HL ++F+K+ VK+RT A +A N Sbjct: 181 VKNHLTSIFRKLGVKDRTHAAIYALKN 207 >UniRef50_C0Z9R4 Two-component hybrid sensor and regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z9R4_BREBN Length = 593 Score = 169 bits (430), Expect = 4e-41, Method: Composition-based stats. Identities = 51/216 (23%), Positives = 84/216 (38%), Gaps = 14/216 (6%) Query: 10 GHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEADK 65 G +L++ +L L+ Q L + G N +LD I ++LLD+ Sbjct: 374 GIRILIVDDQPFVRESLQLVLQNQQDLQVVGVAENGLMALDIIPKEKPDVVLLDVQMPVM 433 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 Q + + ++++++L T E+ NG +V ++ V Sbjct: 434 DGAKTIQ-AIRERWPDMRVIMLTTFEETALAAETLGRGANGYLLKSVSPVELVEAIRVVH 492 Query: 126 RGECYFTQKLASYLITHSG---------NYRYNSTESALLTHREKEILNKLRIGASNNEI 176 +GE K+A L + LT RE+ IL L G I Sbjct: 493 QGEALINHKIAEVLFKEMRLQQEELNGLRQKQGRDCPYGLTERERGILASLVEGLRMKTI 552 Query: 177 ARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 A +F+SE TV+ ++ K+ VKNR +AV A D Sbjct: 553 AEKIFLSEGTVRNCTTVIYAKLGVKNREEAVKKARD 588 >UniRef50_D1XLE6 Two component transcriptional regulator, LuxR family n=3 Tax=Streptomyces RepID=D1XLE6_9ACTO Length = 231 Score = 169 bits (430), Expect = 4e-41, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 90/215 (41%), Gaps = 12/215 (5%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 ++L++ + L + + + + G + +++++ + ++L+D+ + Sbjct: 16 SVLVVDDEPVIRAGLSAILDSQADITVAGTADDGEQAVEACARLRPDVLLMDIRMPRRDG 75 Query: 68 IHYWQDTLSRK---NNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGV 124 + + R ++L+L T + Y D +G E++ ++ Sbjct: 76 LWALAELGRRGLLGPGRSRVLMLTTFDLDAYVDDALTAGASGFLLKNSSYEQLTEAVRAA 135 Query: 125 LRGECYFTQKLASYLITHSGNYRYNSTESAL-----LTHREKEILNKLRIGASNNEIARS 179 G + + +I + R ++ L LT RE ++L +R G SN EIA Sbjct: 136 AAGHSALSPAVTRRIIEGHLSGRPRPSDQELARLRDLTEREVDVLRLIRDGLSNAEIAGE 195 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 L +S +TVKTH+ + K ++R QA A + L Sbjct: 196 LVVSLHTVKTHVSRVLMKTGCQSRAQAAVLARNTL 230 >UniRef50_D2B5Y0 Response regulator receiver protein n=14 Tax=Actinobacteria (class) RepID=D2B5Y0_STRRD Length = 227 Score = 169 bits (430), Expect = 5e-41, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 80/211 (37%), Gaps = 11/211 (5%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 +L++ L L+ L + + + + + L + + ++L+D+ Sbjct: 10 GVLIVDDDPLVRAGLVMMLGGAPDIRVVAQAGDGTQVLPLVDRHAPDVVLMDIRMPVMDG 69 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + L + ++++L T + + G + +V ++ V RG Sbjct: 70 LAAT-EVLRARPGAPEVIVLTTFDADDHVLRALRAGAAGFLLKDTPPDEIVTAVRQVARG 128 Query: 128 ECYFTQKLASYLIT------HSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLF 181 + + LI H ALL RE+E+ L G SN EI L Sbjct: 129 YPVLSPVVTRRLIARVADSGHDRRRTRAGDRLALLNAREREVAVALGQGRSNAEIGAVLH 188 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 +S TVKTH+ + K+ + NR Q +D Sbjct: 189 LSVPTVKTHVSGILTKLGLNNRVQIALLVHD 219 >UniRef50_C5VFN2 Two component transcriptional regulator, LuxR family n=2 Tax=Corynebacterium matruchotii RepID=C5VFN2_9CORY Length = 216 Score = 169 bits (429), Expect = 5e-41, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 90/211 (42%), Gaps = 11/211 (5%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 +L+ L + AL L + L + +H+ Q ++D ++ +IL+D+ Sbjct: 4 KILIADDQVLLSRALATILGSQPDLEVVATVHDGQAAVDTVAHTPVDLILMDVRMPKLDG 63 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + + K N KI++L T NG D E ++ ++ V G Sbjct: 64 VAALK-KIRAKPNPPKIVMLTTFNVPDTVKAALTAGANGFLLKDADPETLIESVRTVAAG 122 Query: 128 ECYFTQKLASYLITHSGNYRYNSTES------ALLTHREKEILNKLRIGASNNEIARSLF 181 + + +++ + ++ S +LLT RE E+L+ + G +N EIA L Sbjct: 123 QTVLAADVVGHILPGALTVAADTLPSHVQQGLSLLTPREMEVLHAIGEGKTNAEIAAELV 182 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 IS TVKTH+ NL K+ ++R A Sbjct: 183 ISATTVKTHVSNLLAKVHARDRVALAIIARK 213 >UniRef50_UPI00018742FB two component transcriptional regulator, LuxR family n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI00018742FB Length = 235 Score = 169 bits (429), Expect = 5e-41, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 88/228 (38%), Gaps = 26/228 (11%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISSGSIILLDMMEADKKLIH 69 +L+ +L + Q + + + G + + ++ S ++++D+ I Sbjct: 5 RVLVAEDQALIRQSFAQLIDAHPQMKVIGAVGDGAEAVRLASGADVVVMDIRMPVMDGIE 64 Query: 70 YWQDTL-------SRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 + + + ++ K+L+L T + G + +++ + Sbjct: 65 ATRQIAQGAPSGGAARASSPKVLVLTTFREEDLVLGALEAGAAGFLLKDSNPRELLSAIM 124 Query: 123 GVLRGECYFTQKLASYLITHSGNYRYNSTESA-----------------LLTHREKEILN 165 + RGE K+ ++ H +S A T RE+EILN Sbjct: 125 RIHRGEGVIDPKVTPMVLRHVSPRAPHSGRPASASSTHGAGSDPTDAGTQFTPREQEILN 184 Query: 166 KLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 + G SN+EIAR L ++ TVKTH+ L K ++R V WA N Sbjct: 185 LVCQGLSNDEIARRLVVATTTVKTHVKALLTKTGSRSRVDLVIWAAKN 232 >UniRef50_B9JKP6 Two-component response regulator protein n=2 Tax=Agrobacterium RepID=B9JKP6_AGRRK Length = 217 Score = 169 bits (429), Expect = 6e-41, Method: Composition-based stats. Identities = 50/206 (24%), Positives = 88/206 (42%), Gaps = 5/206 (2%) Query: 11 HTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLD--DISSGSIILLDMMEADKK 66 ++++ L + + L ++L I G+ N +++ D +ILLD+ Sbjct: 4 ASIVIADDHDLARSGIAAVLATSENLDIVGQAKNGLEAVELCDRLRPDLILLDIRMTPLD 63 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + + + + + KI++L E Y +G +E ++ + VL Sbjct: 64 GLGAAAE-IRKIAPDTKIVMLTMHESIDYLSAAIKVGASGYLLKDVSRESLLRTIDIVLD 122 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 G+ +F L ++ LT+RE+EIL L G +N IAR+L IS T Sbjct: 123 GQAFFDADLMCKMLARIDRESPAEMVIERLTNREREILCSLTTGETNKGIARALSISPGT 182 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWAND 212 VK H+ + K+ V +RTQA A Sbjct: 183 VKVHVERILSKLGVNDRTQAAVLAIQ 208 >UniRef50_B1L0K3 DNA-binding response regulator, LuxR family n=22 Tax=Bacteria RepID=B1L0K3_CLOBM Length = 217 Score = 169 bits (428), Expect = 6e-41, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 91/209 (43%), Gaps = 9/209 (4%) Query: 13 LLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDISSGSI--ILLDMMEADKKLI 68 ++++ L L L + + G + + +L + +L+D+ + + Sbjct: 6 IIVVDDEKLIREGLKIILSTYNDIEVVGLAGDGREALSLCKEKDVQVVLMDIRMPNCDGV 65 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 + + + +IKIL+L T D Y +G E + G++ ++G Sbjct: 66 LGTR-IIKEQFPHIKILILTTFNDKEYIHEALKFGASGYLLKDSSNELIYEGIKACVKGN 124 Query: 129 CYFTQKLASYLITHSGNYRYNSTESALL----THREKEILNKLRIGASNNEIARSLFISE 184 +A+ +I ++ + + + L T RE I+ ++ G SN EIA +++SE Sbjct: 125 VVVHPDVANNIILNTTYEKELNDDDINLKYNLTEREINIIRQIANGLSNKEIAEKIYLSE 184 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 T+K ++ + K+ +++RTQ +A N Sbjct: 185 GTIKNNISTILSKLDLRDRTQIAIFAFKN 213 >UniRef50_Q7UVB4 Nitrate/nitrite regulatory protein narP n=1 Tax=Rhodopirellula baltica RepID=Q7UVB4_RHOBA Length = 210 Score = 169 bits (428), Expect = 6e-41, Method: Composition-based stats. Identities = 48/208 (23%), Positives = 90/208 (43%), Gaps = 5/208 (2%) Query: 11 HTLLLITKSSLQATALLQHLK-QSLAITGKLHNIQRSLDDISSGSI--ILLDMMEADKKL 67 LL++ + L L+ + + + +L+ +S+ + +LLD+ Sbjct: 3 KRLLIVDDHEVSRLGTLAALEGTGIEVVAQADKAADALEIVSNTPLDTVLLDIRMEGGDG 62 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 ++ + + ++ ILL + ++ Y G R++ L G Sbjct: 63 LNTL-GRIKLDHPDLPILLFSGYDNPTYVARAVALGACGYILKTAPVSRLIEALNLAFDG 121 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 + +T++ + R N LT RE E+L ++ +G +N EIA+ L IS TV Sbjct: 122 QQSWTREELRRVTGALATPRMNQDIDVPLTQRESEVLRQMALGLTNKEIAKMLGISYETV 181 Query: 188 KTHLYNLFKKIAVKNRTQAVSWA-NDNL 214 K H+ ++ +K+ V +RTQA WA NL Sbjct: 182 KEHVQHILRKLGVSDRTQAAVWAVRKNL 209 >UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microscilla marina ATCC 23134 RepID=A1ZEE6_9SPHI Length = 213 Score = 169 bits (428), Expect = 7e-41, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 8/209 (3%) Query: 12 TLLLITKSSLQATALLQHLKQSLAITGKLHNIQ-----RSLDDISSGSIILLDMMEADKK 66 T ++ ++ L Q L + + +L I+L D+ Sbjct: 3 TFYIVEDHTIVRQGLKQLLAKYAEMKVLAEFGVPDQIMDNLAKGERPDIVLCDINLPGMD 62 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + + + +K + KI++L + Y +G F+ ++ ++ G++ + Sbjct: 63 GL-ALTEKIKQKYPDQKIIILTMHQKEFYVLKAFDAGADGYFHKDTEESELIMGIKKIYN 121 Query: 127 GECYFTQKLASYLITHSGNYRYNSTES--ALLTHREKEILNKLRIGASNNEIARSLFISE 184 G+ YF Q ++ LI + + +S ++ LT REKE+L ++ G N EI L IS Sbjct: 122 GQKYFCQSVSQILINRLLDTKNSSGKTLLPTLTFREKEVLEQVVAGLGNREIGDKLCIST 181 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 TV+ H N+ +K +KN + V +A +N Sbjct: 182 RTVENHRANILRKFGLKNTVELVKFAIEN 210 >UniRef50_UPI00018507A5 two component LuxR family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018507A5 Length = 212 Score = 169 bits (428), Expect = 7e-41, Method: Composition-based stats. Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 10/203 (4%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +L+ L + L + + + + ++ + ++L+D+ D Sbjct: 5 RVLIADDHPLFRQGVSSVLANTPDNEVIAEAGSGEEAVQMACNLLPDLVLMDIQMPDLNG 64 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + LS K +I I+++ ED G ++E ++ ++ + +G Sbjct: 65 IEATRKILS-KCRDIYIIIITMFEDDTSVFSAMQAGARGYVLKDAEKEDILRAVRAIAKG 123 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESA-----LLTHREKEILNKLRIGASNNEIARSLFI 182 E F+ +AS +I + T A LT RE E+L L GASN+E+A +L + Sbjct: 124 EVLFSSGVASRMIDYFAQGEVTQTVVASTLFPELTSRESEVLFLLSKGASNSEVAETLGL 183 Query: 183 SENTVKTHLYNLFKKIAVKNRTQ 205 S TV ++ N+ K+ V +R + Sbjct: 184 SNKTVYNYVANILNKLQVSDRQE 206 >UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paenibacillaceae RepID=C0ZBD9_BREBN Length = 215 Score = 169 bits (428), Expect = 7e-41, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 94/211 (44%), Gaps = 6/211 (2%) Query: 8 IHGHTLLLITKSSLQATALLQHLKQS--LAITGKLHNIQRSLDDISS--GSIILLDMMEA 63 ++ + +L+ + A+ L + G+ N + + ++L+D+ Sbjct: 1 MNAYRVLIADDHPMARMAIRSLLDPDPSFEVIGEAQNGEEAFLLCGQIQPDLVLMDINMP 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + ++ + +IK+++L+ +D G + + +N L Sbjct: 61 KWSGLEATREV-KKAYPHIKVVILSVSDDVADLITAIQFGAQGYLLKNLEPDDWINYLHA 119 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTE-SALLTHREKEILNKLRIGASNNEIARSLFI 182 +L + T+++A+ L+ A+LT RE+EI+ + G +N EI+ +L I Sbjct: 120 LLGEDSELTREMATRLMYRFRQEEATDEMVPAVLTPREREIVMYVGAGKTNREISEALII 179 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 +ENTVK HL N+ +K+ + NR Q ++A + Sbjct: 180 AENTVKNHLKNILEKLQLANRVQLAAYAVRH 210 >UniRef50_C7MRK0 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MRK0_SACVD Length = 226 Score = 169 bits (428), Expect = 7e-41, Method: Composition-based stats. Identities = 45/211 (21%), Positives = 91/211 (43%), Gaps = 14/211 (6%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--------GSIILLDMM 61 ++++ ++ L +L+ L + + + Q ++D ++ ++L+D+ Sbjct: 12 RVMVVDDHAIVRRGLRAYLETVPDLRLVSEAADGQEAVDLLNERHVVGDPMPHVVLMDLQ 71 Query: 62 EADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGL 121 I + L+ ++K+++L + + G + E V + Sbjct: 72 MPRLDGIEATRSILAS-YPDVKVVVLTSFSEAERVHAALSAGAAGYVLKDAEPEEVATAV 130 Query: 122 QGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLF 181 + ++GE + +A L + + T LT RE++IL + G SN EIA L Sbjct: 131 RAAVKGEVHLDAAVARLLARRMASPQVGVTS---LTARERDILVLVGQGLSNREIADRLV 187 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 ISE T +TH+ N+ K+ + +RTQA A Sbjct: 188 ISERTARTHVSNVLSKLQLSSRTQAALLAIR 218 >UniRef50_B1XRB7 Response regulator receiver, LuxR domain n=14 Tax=Cyanobacteria RepID=B1XRB7_SYNP2 Length = 231 Score = 169 bits (428), Expect = 7e-41, Method: Composition-based stats. Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 10/211 (4%) Query: 12 TLLLITKSSLQATALLQHLKQS--LAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +LLI L L L+Q L IT + + + +LD I+ II+LD+ Sbjct: 6 KVLLIEDDELFRLGLATRLQQEALLEITAEAEDGETALDLITKQEFDIIILDVGLPGIGG 65 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + + ++ + IL+L + + G D E ++ +Q + G Sbjct: 66 VETCRQ-IKQQQPQLPILVLTSHSQPTLINRLIEAQAQGYCLKGVDAESLILAIQSIAAG 124 Query: 128 ECYFTQKLASYLITHSGNY-----RYNSTESALLTHREKEILNKLRIGASNNEIARSLFI 182 ++ + + R + LT RE EIL + G SN+EIA +L+I Sbjct: 125 ASWWDAQATQQIRAQFQQPMAEMPRSVPAQDNPLTQREGEILALIANGKSNSEIAETLYI 184 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 + +TV+ H++ + +K+ ++RTQAV A + Sbjct: 185 AASTVRVHVHAILQKLEARDRTQAVVIALRH 215 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 169 bits (428), Expect = 8e-41, Method: Composition-based stats. Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 7/208 (3%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +L+ +L L L + + G+ N +++ +ILLD+ Sbjct: 7 KILITEDHALVRKGLKSLISSRSEFQVVGEADNGLAAIEMTRKCKPDLILLDLSMPKMNG 66 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + L ++ +KIL++ Y +G +D + + ++ ++ G Sbjct: 67 LATMRQ-LKKERPEVKILVITMHASQDYLIPALKEGADGYLLKGDDPQELFMAIRAIMDG 125 Query: 128 ECYFTQKLASYLITHSGNY--RYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 + Y + L+ LI N R + A LT REKE+ + G +N +IA LFIS Sbjct: 126 KAYLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTNQQIADLLFISPK 185 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWANDN 213 TV H NL KK+ + + + ++A N Sbjct: 186 TVDKHRTNLMKKLDLHSAREVSNFALKN 213 >UniRef50_A3WDJ9 Two-component response regulator n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WDJ9_9SPHN Length = 217 Score = 169 bits (428), Expect = 8e-41, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 82/209 (39%), Gaps = 5/209 (2%) Query: 8 IHGHTLLLITKSSLQATALLQHLK-QSLAITGKLHNIQRSLDDISS--GSIILLDMMEAD 64 + +L++ L L L + + G + +++ S +IL+D+ D Sbjct: 1 MTAPRILIVDDHQLAREGLRAVLAGDGMEVVGLASTGEEAVELAGSLVPDVILMDVRLGD 60 Query: 65 K-KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + + ++ IK+++L E Y G + + + Sbjct: 61 GIDGLEATRQVVALGLP-IKVVMLTLHEMPGYVREALAAGAAGYVLKDTEIGDLRAAINQ 119 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 V+ G+ L S + S +LT RE+E++ + G +N EIAR L IS Sbjct: 120 VMAGQSALPLDLVSAAMRAENRPEPKGDLSQILTSREQEVVELVAEGLTNKEIARKLDIS 179 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 TVK H+ L K+ V +RTQA A Sbjct: 180 PATVKVHVERLIGKLGVADRTQAAVMAVK 208 >UniRef50_B9XH34 Two component transcriptional regulator, LuxR family n=3 Tax=bacterium Ellin514 RepID=B9XH34_9BACT Length = 226 Score = 168 bits (427), Expect = 9e-41, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 87/208 (41%), Gaps = 5/208 (2%) Query: 6 HSIHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMM 61 H+ + ++ ++ L + + + + +L I S ++L+D+ Sbjct: 12 HADVSTKIAIVEDNATLRQYLAEFVAGAPGNRCVCACGSAEEALVKIPSLNPDVVLMDIH 71 Query: 62 EADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGL 121 + I L K N+++++L +D G D + ++ + Sbjct: 72 LPGESGI-VCTARLREKLPNLQVIMLTVYKDTKMIFQALKAGACGYVLKRSDDKEILEAI 130 Query: 122 QGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLF 181 V G T ++A ++ E+ L+ RE+EIL L G SN EI L Sbjct: 131 AEVRAGGAPMTSEIARMVVRSFIADTPEKDETGQLSGREQEILALLAEGLSNKEIGSKLN 190 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSW 209 IS TV+THL ++++K+ V+ RT+A + Sbjct: 191 ISFTTVRTHLMHIYEKLHVRCRTEAAAK 218 >UniRef50_C7MXL4 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=3 Tax=Actinomycetales RepID=C7MXL4_SACVD Length = 239 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 44/205 (21%), Positives = 86/205 (41%), Gaps = 5/205 (2%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 ++ L+ + L L + + I G+ + +L I + +LD+ D Sbjct: 4 SVFLVDDHEIVRRGLTDLLEAEPDMRIVGEAASAGEALARIPGTGADVAVLDVRLPDGNG 63 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + ++ LS ++ L+L + D +G +V+ ++ V G Sbjct: 64 VELCRELLSTV-PGLRCLMLTSYADDEALFNAIMAGASGFVLKQVLGSDLVSAVRTVGSG 122 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 K S L+ R S + L+ +E+ +L+ + G +N EIA L+++E TV Sbjct: 123 GSLLDSKTTSALMNRIRREREESDPVSGLSEQERAVLDLIGEGLTNREIAARLYLAEKTV 182 Query: 188 KTHLYNLFKKIAVKNRTQAVSWAND 212 K ++ L K+ ++ RTQA A + Sbjct: 183 KNYVSRLLGKLGMQRRTQAAVLATE 207 >UniRef50_D2PS71 Two component transcriptional regulator, LuxR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PS71_9ACTO Length = 220 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 7/207 (3%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +++ S AL + + +L + G +++ + ++L+D+ Sbjct: 6 GVVVAEDQSSVRAALAELVGSDPALDLLGCGATGDEAIELATRLHPDVVLMDIRMPGTDG 65 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + +R K+L+L T + Y G ++ + V G Sbjct: 66 LTATRVVCARL-PATKVLVLTTFDLDEYVYEALGAGATGFLLKSAPVTDILRAIHTVHEG 124 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESA--LLTHREKEILNKLRIGASNNEIARSLFISEN 185 + + ++ LI R T A L+ RE E++ + G SN E+A LF+S + Sbjct: 125 QAMLSPEITRRLIAEVSRGRTRRTPEAFEQLSPRELELVGAVLRGLSNEELAAELFLSLS 184 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWAND 212 TVKT+L +F K+ V++RTQ V A + Sbjct: 185 TVKTYLSRIFSKLDVRDRTQLVILAYE 211 >UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeobacter violaceus RepID=Q7NMF3_GLOVI Length = 212 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 85/207 (41%), Gaps = 8/207 (3%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +L++ +L L Q L + G+ + +++L S ++L+D+ Sbjct: 3 RILIVEDHALMRIGLRQVLSQTPEYEVAGEAADGEQALALARSLQPDLVLMDLGLPVMSG 62 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMED--QERVVNGLQGVL 125 + L R+ +++L L + ++ +G R++ + V Sbjct: 63 TEVTR-ILKREYPAMRVLALTSHDEDESVFGALAAGADGYCLKATAGIASRLLAAVASVR 121 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 G + +A ++ G ++ L+ RE E+L + G +N EI R L+I+ Sbjct: 122 DGAAWLDPDIADRVLRDLGRIPQAGADNP-LSEREMEVLKLIADGLTNAEIGRRLYIASG 180 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWAND 212 TV+ H+ N+ K+ V +R QA A Sbjct: 181 TVRVHVSNIIAKLGVNDRVQAAVRALR 207 >UniRef50_C5SGD8 Two component transcriptional regulator, LuxR family n=2 Tax=Caulobacteraceae RepID=C5SGD8_9CAUL Length = 218 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 46/207 (22%), Positives = 86/207 (41%), Gaps = 5/207 (2%) Query: 12 TLLLITKSSLQATALLQHL-KQSLAITGKLHNIQRS--LDDISSGSIILLDMME-ADKKL 67 +L++ +L L L ++ G+ + + L + ++L+D+ D Sbjct: 7 RILIVDDHALAREGLKAVLTSSGFSVVGEAADGPAAIALTEALCPDVVLMDVRLKGDMDG 66 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + ++ ++L+L + Y G + + + V +G Sbjct: 67 LEATRR-IAALGLAARVLMLTLHDLPAYVREALAAGAAGYVLKDTAIDDLQAAIVRVAQG 125 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 + L S + + T + LT RE+EI++ + G +N EI RSL IS TV Sbjct: 126 QTALPLDLVSAAMRAPEPVERDPTALSSLTGREREIVHLIAEGMTNKEIGRSLGISPATV 185 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDNL 214 K H+ L K+ V +RTQA A+ +L Sbjct: 186 KAHVERLIAKLGVTDRTQAAVLASRHL 212 >UniRef50_D1C3I4 Two component transcriptional regulator, LuxR family n=2 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C3I4_SPHTD Length = 249 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 50/225 (22%), Positives = 102/225 (45%), Gaps = 19/225 (8%) Query: 7 SIHGHTLLLITKSSLQATALLQHLKQS--LAITGKLHNIQRSL--DDISSGSIILLDMME 62 S +G T+L++ L L + +++ + + + ++ DI SI L+D+ Sbjct: 7 SGNGRTVLIVDDHPLFRQGLRRLIEEGGAFKVVAEATSGHEAIREADIHRPSIALIDIQL 66 Query: 63 ADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 ++ + L +++ ++ I++L+ D + + + +++ L Sbjct: 67 PGVTGLNVAR-ILKKQHPSMHIIILSMHVDDERLFEAVRAGASAFLTKDIEAQELISSLD 125 Query: 123 GVLRGECYFT------QKLASYLITHSGNYRYNSTESAL--------LTHREKEILNKLR 168 V++GE +LA +++ + E+ L+ RE E+L+ + Sbjct: 126 RVVQGEQLINLEVMSRPELAWRVLSEFRQLTGDDGEAGPASDPKRLPLSVREVEVLDCVA 185 Query: 169 IGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 G SN EIA +LFI+E TVK H+ ++ +K+ V +R QAV A N Sbjct: 186 QGLSNKEIAEALFITEQTVKNHMTSVLRKLQVNDRVQAVLCAVRN 230 >UniRef50_Q5WJ71 Two-component response regulator n=5 Tax=Bacillaceae RepID=Q5WJ71_BACSK Length = 210 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 6/208 (2%) Query: 11 HTLLLITKSSLQATALLQHLK-QSLAITGKLHNIQRSLDDISSG--SIILLDMMEADKKL 67 T+LL + L ++ + + N Q ++D ++L+D+ Sbjct: 2 KTILLAEDQQIVRQGLKMMIEHRQRYQVIEAENGQEAVDLAGRHVIDLVLMDVRMPVMTG 61 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + ++ N+KI++L T D Y G D E + ++ L G Sbjct: 62 IEATKRLI-ERDPNVKIVMLTTFIDERYAIEALKAGAKGYILKDADMESLFATIEKALLG 120 Query: 128 ECYFTQKLASYLITHSGNYRYNSTES--ALLTHREKEILNKLRIGASNNEIARSLFISEN 185 E ++A+ ++ + + L REKEI+ + G +N EIA L++S Sbjct: 121 ELVLDGQVAAKVMPKLLQHSAPQEKEQIPPLAEREKEIIRLVGQGRNNAEIAAELYLSVG 180 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWANDN 213 TVK ++ LF K+ V++RTQ +A + Sbjct: 181 TVKNYISQLFIKLGVRDRTQLAIFAVKH 208 >UniRef50_Q7MFD8 DNA-binding HTH domain-containing protein n=9 Tax=Vibrio RepID=Q7MFD8_VIBVY Length = 224 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 117/211 (55%), Gaps = 5/211 (2%) Query: 9 HGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGS---IILLDMMEADK 65 ++LIT+ SLQ++ L + L++ L + L + + +S S IL+D ++ Sbjct: 7 QNKEVILITEDSLQSSLLKEILEKKLNMVVHLLTPKELDERTTSYSSIKAILVDYSVVEE 66 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 + + + + ++ +L+N D ++ W + G+FY +D + G+ +L Sbjct: 67 DFYSSYLNFIDENFSEVQEVLINCQNDISIEELCIWRSLTGIFYLSDDISTLELGIDKIL 126 Query: 126 RGECYFTQKLASYLITHSGNYRYN--STESALLTHREKEILNKLRIGASNNEIARSLFIS 183 G+ +F++K++ I+ + T S LT RE++I+ L +G SN +IAR LF+ Sbjct: 127 SGDMWFSRKISQEFISTLRQHSKPISKTVSTKLTKREQQIITLLSLGNSNQQIARKLFVR 186 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 ENTVKTHL+N+FKKI VKNR QA+ WA ++L Sbjct: 187 ENTVKTHLHNIFKKIDVKNRVQALIWAKEHL 217 >UniRef50_C0EEH8 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EEH8_9CLOT Length = 206 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 89/207 (42%), Gaps = 9/207 (4%) Query: 12 TLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 ++L + Q ++ +Q +A+ G N ++++ ++LLD+ Sbjct: 4 RVILADDDPIICQGLRMILETQQDIALCGVAENGVQAVELCRTQRPDVVLLDIRMPLLDG 63 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + LLL T ++ + + G +R++ ++ V G Sbjct: 64 IEAAAQIMQMEAGAP--LLLTTFDEAEFILRALKTGVRGYILKNSPAQRILTAVRAVAEG 121 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 F Q + Y+ + T +LLT RE E++ + G SN EIA LF+S TV Sbjct: 122 GTVFQQDILEYI--RDRTVFPDHTIFSLLTPREMEVVALIAEGLSNKEIAERLFLSNGTV 179 Query: 188 KTHLYNLFKKIAVKNRTQ-AVSWANDN 213 + H+ + +K +++RTQ AV + N Sbjct: 180 RNHISVILEKTGLEHRTQIAVHFLKGN 206 >UniRef50_B4D831 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B4D831_9BACT Length = 209 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 13/205 (6%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 +L++ ++ L++ + ++ L + G+ N + L+ ++ +D Sbjct: 6 RVLIVDDHAMMRLGLVEAIAGERDLTLVGEAANGTQCLEQYRKHQPDVVTMDFRLPGADG 65 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 L + + ++++L+ E G + E V+ ++ V+ G Sbjct: 66 AESTAH-LRTEFPDARVVVLSVFEGEEDIWRAVEAGAMGYVSKSAEVEEVLEAIRCVVGG 124 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 E YF +AS L + LT RE ++L+ + G SN EIA +L +SE TV Sbjct: 125 ETYFPAPIASKLASRRTR--------DALTPREHQVLHHIVAGLSNKEIAAALHMSEATV 176 Query: 188 KTHLYNLFKKIAVKNRTQAVSWAND 212 K H+ N K+ V +RTQA A Sbjct: 177 KLHISNTLAKLHVADRTQAAIVAVQ 201 >UniRef50_D2PZN7 Two component transcriptional regulator, LuxR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PZN7_9ACTO Length = 242 Score = 168 bits (425), Expect = 1e-40, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 84/211 (39%), Gaps = 10/211 (4%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 ++L +L A L +A+ G+ + + ++ ++++D+ Sbjct: 17 RVVLADDQALLRGAFRTLLDSTDDIAVVGEAGDGEEAVALTRRTHPDVVVMDIQMPGMDG 76 Query: 68 IHYWQDTLSRKN-NNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + + + ++L+L T E Y +G D + +++ ++ + Sbjct: 77 LTATAQICADPDLRASRVLILTTYETDEYVAQALRAGASGFIGKGIDADGLIDAVRTIAD 136 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESAL-----LTHREKEILNKLRIGASNNEIARSLF 181 G+ + L+ ++ + LT RE+E++ + G SN EIA ++ Sbjct: 137 GDALLSPAATRSLVARFLATPVDTAPRDVERLVALTPREREMVALVATGLSNLEIADRMY 196 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 +S TV+ H+ K+ ++R Q V+ A Sbjct: 197 VSPFTVRAHVQRAMTKLEARDRAQLVAIAYR 227 >UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=uncultured bacterium BLR5 RepID=C0INV4_9BACT Length = 215 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 50/206 (24%), Positives = 79/206 (38%), Gaps = 14/206 (6%) Query: 12 TLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 ++ + L + + L + + I G + +L I L+D+ D Sbjct: 12 RIMCVDDHPLMHKGISALIQSQPDMTIVGAVSKAGDALATFREKVPDITLMDLRLPDGNG 71 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I L ++ +I++L E G E ++ ++ V G Sbjct: 72 IDTMISILK-EHPKARIIILTMFEGDVEIQRALKSGACGYILKNMPPEDLLQVIRKVHSG 130 Query: 128 ECY-FTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 E +A+ L H G LT RE E+L + G SN E+ L ISE T Sbjct: 131 EKKRLHPVIAATLADHFGE--------ENLTSRETEVLQLISEGNSNKEVGNRLSISEET 182 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWAND 212 VK H+ N+ K+ +RTQAVS A Sbjct: 183 VKGHVKNILGKLGANDRTQAVSIAVR 208 >UniRef50_B9XA37 Two component transcriptional regulator, LuxR family n=7 Tax=Verrucomicrobia RepID=B9XA37_9BACT Length = 231 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 78/204 (38%), Gaps = 11/204 (5%) Query: 13 LLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKLI 68 + L+ + L + G + +L I + ++L+D+ Sbjct: 22 VALVEDDAGVRANLASMIDCAPGFQCRGAYPDAMTALKGIPANRPDVVLMDINMPGMLGT 81 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 L + +L+L +D G +++++ ++ + G Sbjct: 82 ECVSR-LKNVAPTLPVLMLTVYDDSEQIFKSLMAGATGYLLKRTPKDKLLEAIREIASGG 140 Query: 129 CYFTQKLASYLITHSGNYRYNS------TESALLTHREKEILNKLRIGASNNEIARSLFI 182 ++++A ++ + E LT RE+++L L G + EIA L I Sbjct: 141 APMSRQIARRVVQFFQEIKQEPKEITRAPEIKSLTEREEQVLALLSKGHAYKEIADLLNI 200 Query: 183 SENTVKTHLYNLFKKIAVKNRTQA 206 S TV+TH+ ++ K+ V +RT+A Sbjct: 201 SFETVRTHVRTIYDKLHVHSRTEA 224 >UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexaceae RepID=A9WKI8_CHLAA Length = 209 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 11/207 (5%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADK-K 66 + L+ S+ L +L + + + G+ N + +L S +I++D++ Sbjct: 5 RVALVDDHSIVRRGLSAYLAAQPDIVVVGEAANGESALQMASTWQADVIVMDVLMPGGID 64 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I + L R + I++L+ D E+++ ++G + Sbjct: 65 GIETTRQ-LKRLIPHTHIIILSGYADDARVIGALRAGAITYIEKESQPEQLLEAIRGAMA 123 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 G+ L ++ + ++ LT RE+E+L + G +N EIA L +SE T Sbjct: 124 GKAVLAPALMQRILEAQTSKAADT-----LTEREREVLKLVAEGLTNAEIASRLTVSEET 178 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDN 213 VKTH+ ++ +K+ + +RTQA +A + Sbjct: 179 VKTHVASILRKLGLAHRTQAAIYALRH 205 >UniRef50_UPI0001B502C9 two component LuxR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B502C9 Length = 229 Score = 167 bits (424), Expect = 2e-40, Method: Composition-based stats. Identities = 41/207 (19%), Positives = 86/207 (41%), Gaps = 9/207 (4%) Query: 10 GHTLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRS--LDDISSGSIILLDMMEADK 65 +L+ ++ Q ++ L + + G+ N + + L ++L+D++ Sbjct: 2 ALRVLIADDHAVVRQGLRMILGLDNEIKVVGETTNGREAVRLARELCPDVVLMDLLMPVM 61 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 + + + + ++++ L + D G + + + N ++ Sbjct: 62 DGVSATAE-IRQDIPEVEVVALTSSLDDAMVMGAVRAGAIGFLLKNAEADDLRNAVKAAA 120 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 G+ + + S L+ + LT RE E+L L G +N EIAR L I + Sbjct: 121 AGQIHVSPAAISRLMGQVR----EPSGPEQLTERETEVLTMLARGKANKEIARDLRIGQQ 176 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWAND 212 TVKT++ ++ K+ V +RTQA +A Sbjct: 177 TVKTYVSHILTKLGVHSRTQAAVYAVQ 203 >UniRef50_C7R398 Two component transcriptional regulator, LuxR family n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R398_JONDD Length = 230 Score = 167 bits (424), Expect = 2e-40, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 85/211 (40%), Gaps = 11/211 (5%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 ++++ +L L L + + + + + ++ + ++L+D+ + Sbjct: 10 RIIIVDDDALVRAGLRMILGGDPGITVVAEGTHGEEAVSLYAAHQPDVVLMDIRMPVRDG 69 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + +D ++R + +L+L T + + G +V + G Sbjct: 70 LSATKDIVTR-WPHANVLVLTTFDTDEFIVKALRAGARGFLLKDTSPPDLVRAVNLAGDG 128 Query: 128 ECYFTQKLASYLITH------SGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLF 181 + + + LI +G R LT RE ++ ++ G SN EI+++L+ Sbjct: 129 HPTLSPSVTAQLIAKVSEEPDTGRQRQARRMVEQLTERELDVAQQIAQGKSNQEISQTLY 188 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 +S TVKTH+ +F K V NR Q +D Sbjct: 189 MSIPTVKTHISRIFTKFDVDNRVQIAIRMHD 219 >UniRef50_C6XAG0 Two component transcriptional regulator, LuxR family n=2 Tax=Proteobacteria RepID=C6XAG0_METSD Length = 232 Score = 167 bits (424), Expect = 2e-40, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 80/206 (38%), Gaps = 5/206 (2%) Query: 12 TLLLITKSSLQATALLQHLKQS--LAITGKLHNIQRSL--DDISSGSIILLDMMEADKKL 67 + LI +L + Q ++ + G+ + L ++L+D+ Sbjct: 25 KVFLIDDHALFRKGVGQMIEADPAFRVVGEAASGSEGLLLAPPLQPDVVLIDLNMKGLNG 84 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + + + ++L + +G + E + L+ V+ G Sbjct: 85 IETLRRFKTESSLQARFVVLTVSDAEDDLLEALRAGADGYLLKDMEPEDLCASLKKVISG 144 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESAL-LTHREKEILNKLRIGASNNEIARSLFISENT 186 L L R + + LT RE+EIL L G +N IAR L IS+ T Sbjct: 145 MTVIQDSLTEVLKQALLEPRTRKADDDVALTDREQEILQCLADGLNNKTIARKLGISDTT 204 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWAND 212 VK H+ +L K+ + +R +A WA+ Sbjct: 205 VKVHIKHLLSKLKLTSRLEAAVWAHR 230 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 167 bits (423), Expect = 3e-40, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 83/204 (40%), Gaps = 5/204 (2%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQR--SLDDISSGSIILLDMMEADKKL 67 +LL + AL L L + + + + ++ D ++ +D+ Sbjct: 4 RILLADDHQMFRHALRALLARDPELEVVAEAASGEEVLAIADAQPVDLVCMDIAMPGMDG 63 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + L+R + ++++ L+ D + G E + ++ ++ V G Sbjct: 64 IEATRRLLAR-HPALRVIGLSAFADRQFVTDLLAAGARGYITKGEAGDELLRAIRTVCEG 122 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 Y ++A+ + + + LT RE+++L + G ++ +I L I+ +TV Sbjct: 123 RSYLCPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRLHIAASTV 182 Query: 188 KTHLYNLFKKIAVKNRTQAVSWAN 211 + H NL +K+ + N + +A Sbjct: 183 EVHRRNLMRKLDLHNVAELTRYAI 206 >UniRef50_UPI0001AEC67C two-component system regulatory protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC67C Length = 214 Score = 167 bits (423), Expect = 3e-40, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 86/208 (41%), Gaps = 8/208 (3%) Query: 12 TLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLD--DISSGSIILLDMMEADKKL 67 L+L+ L + L L S+ + G+ N Q+ +D + + +IL+D+ Sbjct: 4 RLILVEDQMLVREGIKSLLGLDDSVEVVGEYENGQQLIDSENGTHCDVILMDIRMPKLSG 63 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I L + +L+L T +D+ + G E +V+ + + G Sbjct: 64 IDTLL-ALRDRGIKTPVLMLTTFDDHELVNGAMRAGAKGYLLKDVSLETLVDTITQIKNG 122 Query: 128 ECYFTQKLASYLITHSGNYRYNSTE---SALLTHREKEILNKLRIGASNNEIARSLFISE 184 + + ++ LT +E EIL + G SN EIA ++F S Sbjct: 123 KTLIQPAVTEKVLQGLKGLNVEFESFENPEPLTEKEVEILRLIAAGYSNKEIADAMFKST 182 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWAND 212 T+K + ++ K+ V++RT+AV A + Sbjct: 183 GTIKNQVSSIMAKLGVRDRTRAVLKALE 210 >UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7V6_ACAM1 Length = 222 Score = 167 bits (423), Expect = 3e-40, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 93/212 (43%), Gaps = 13/212 (6%) Query: 13 LLLITKSSLQATALL--QHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKLI 68 LLL+ +L L L+ + G+ N Q+++D + +I+L+D+ I Sbjct: 8 LLLVEDHALMRMGLKGQFSLESDFEVIGEAENGQQAIDLAAQLQPNIVLMDIELPILDGI 67 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 Q + +I++L L+ +G D ++++ ++ + G Sbjct: 68 SATQ-KIKATCPDIRVLALSAFGKDNQVVGMLAAGADGYCLKSIDWQQLLAVIRLIQGGG 126 Query: 129 CYFTQKLASYLIT--------HSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL 180 Y ++A L + + + + +L+ RE+E+L + G SN EIA L Sbjct: 127 TYLDPQIAHKLASMLKSANTPTTAPAHRQTAPATVLSDREREVLQLISEGCSNQEIANQL 186 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 ++S T+K+++ + K++V +R QA + A Sbjct: 187 YLSLGTIKSYVRMILNKLSVDDRVQAAAKAVR 218 >UniRef50_C6CWJ3 Two component transcriptional regulator, LuxR family n=4 Tax=Bacillales RepID=C6CWJ3_PAESJ Length = 235 Score = 167 bits (423), Expect = 3e-40, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 89/222 (40%), Gaps = 22/222 (9%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 + L+ + + + + G+ + + ++ I ++L+D+ Sbjct: 9 RVFLVDDHPHGREGMREIIGADPEFMVVGEAASGEEAIARIDDVLPDLVLMDINMPGMGG 68 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + Q L ++KI+++ +D + G + L+ V+ Sbjct: 69 LEATQQ-LKYLYPSLKIVMVTVSDDITHLFEAIKRGAQGYLFKNLSPSAWREYLRAVVDD 127 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESA-----------------LLTHREKEILNKLRIG 170 E ++++A L+ + N + A LT REK+IL ++ G Sbjct: 128 EAPMSKEIAFRLLQEFTSAASNGIKPAKTGSKPGHAGDASAMTTPLTAREKDILERVVTG 187 Query: 171 ASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 SN EIA + +SE+TVK HL N+ +K+ + NR Q +A + Sbjct: 188 ESNKEIAVAFGLSEHTVKNHLKNILQKLHLDNRVQLTRYAYE 229 >UniRef50_Q3SG39 Two Component Transcriptional Regulator, LuxR family n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SG39_THIDA Length = 221 Score = 167 bits (423), Expect = 3e-40, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 6/211 (2%) Query: 8 IHGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQ----RSLDDISSGSIILLDMMEA 63 + ++L+ +L L + L+QS I L +++LD+ Sbjct: 1 MSLTRIILVDDHTLFRKGLAELLEQSGEIEVTAFTGNPDEVAMLLKAHRPDVLILDLNMP 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 I Q L + IL+L E NG + + VV+ + Sbjct: 61 GTDGITLMQQ-LRNAGFALPILILTLSETEDDLARALRAGANGYLLKSMEPDEVVDAILR 119 Query: 124 VLRGECYFTQKLASYLIT-HSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFI 182 RGE + + L+ + + + LT RE+EIL+ L G SN IAR+L I Sbjct: 120 AQRGETVVAPAMTAKLVKLYDQKGQDAGSLLDALTPREREILSHLSRGESNKAIARTLDI 179 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 S +TVK H+ ++ K+ + +R +A +A ++ Sbjct: 180 SHDTVKLHVRHILAKLNLSSRVEAAVFAVEH 210 >UniRef50_C5SBA1 Two component transcriptional regulator, LuxR family n=3 Tax=Gammaproteobacteria RepID=C5SBA1_CHRVI Length = 238 Score = 167 bits (423), Expect = 3e-40, Method: Composition-based stats. Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 8/208 (3%) Query: 12 TLLLITKSSLQATALLQHLKQ-SLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKLI 68 +LLI +L L + L++ + + + L+ ++ ++LLDM + Sbjct: 2 RVLLIDDHALFRFGLQELLERRGIEVVAAVGESSTGLERVAETRPDVVLLDMRMPGLNGL 61 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 + L + ++ I +L T + G + + ++ L +++G Sbjct: 62 ELLRR-LRAAHQSMPIAMLTTSAEERDVIDSLQSGAQGYLLKDMEPDALIAALGEIVQGR 120 Query: 129 CYFTQKLASYLITHSGNYRYN----STESALLTHREKEILNKLRIGASNNEIARSLFISE 184 +L L S +A LT RE+EIL L G SN IAR L ISE Sbjct: 121 TVVASELTGVLARAVRGESTPVPVVSGGAADLTPREQEILCHLAEGQSNKTIARELGISE 180 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWAND 212 TVK H+ + +K+ V +R +A A + Sbjct: 181 GTVKLHVKAILRKLDVHSRVEAAVIAVE 208 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 166 bits (422), Expect = 3e-40, Method: Composition-based stats. Identities = 41/206 (19%), Positives = 85/206 (41%), Gaps = 6/206 (2%) Query: 12 TLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 +LL + + L + ++ + + + N + +L + ++D+M Sbjct: 4 KILLADDHKILREGVKALLNRQEDMEVVAEAGNGEEALSIAGEIRPDVTVMDVMMPQMDG 63 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + ++ + +++ L+ D + G +V ++ V+ G Sbjct: 64 IEATRRIV--EDGSSRVVALSMYADRSFVSEMLKVGALGFLLKDCASTELVEAVRKVMDG 121 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 E Y ++ + + ++ + LT REKEIL L G +N E+A L +S TV Sbjct: 122 EIYLGPSISHIVAKLYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHLSIKTV 181 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDN 213 TH ++ K+ +KN V +A N Sbjct: 182 GTHRQHIMNKLKLKNLADLVKYAIRN 207 >UniRef50_Q73CG3 DNA-binding response regulator, LuxR family n=10 Tax=Firmicutes RepID=Q73CG3_BACC1 Length = 214 Score = 166 bits (422), Expect = 4e-40, Method: Composition-based stats. Identities = 46/207 (22%), Positives = 91/207 (43%), Gaps = 6/207 (2%) Query: 11 HTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADKK 66 + +L++ + L ++ S I G+ N + +L I +IL+D+ Sbjct: 3 YNVLIVDDHFVVREGLKLIIETSDSFQIIGEATNGEEALSFIEKKKPDVILMDLNMPKMS 62 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + + L++K N+ I++L T + G D+E + L+ +R Sbjct: 63 GLETI-EVLNKKQNHTPIIILTTYNEDELMLKGIELGAKGYLLKDTDRENLFRTLEAAIR 121 Query: 127 GECYFTQKLASYLITHSGNY-RYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 GE + ++ + N E LT +E +L + G N +IA + I+E Sbjct: 122 GEILLQPNIMEKIVNYKRKEIHANVVEENNLTEKELFVLKAIARGNKNKDIAFDMGIAER 181 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWAND 212 TVK +L N++ K+ V +R++AV+ + + Sbjct: 182 TVKAYLTNIYNKLGVNSRSEAVAVSIE 208 >UniRef50_C4RJG1 Two-component system response regulator receiver n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RJG1_9ACTO Length = 264 Score = 166 bits (422), Expect = 4e-40, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 81/210 (38%), Gaps = 6/210 (2%) Query: 8 IHGHTLLLITKSSLQATALLQHLKQSLAITG--KLHNIQRSLDDI--SSGSIILLDMMEA 63 + +L++ + L L+ + G + ++ + ++ +D+ Sbjct: 51 VERIRVLIVDDHPVVRRGLRTMLEGESWVDGIAEAATCAEAVSSVVADRVGVVAMDVALP 110 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 D + + L + ++L+L +D + G D + +++ L+ Sbjct: 111 DGDGVEATRRILLSR-PETRVLMLTMADDEDVVNRSLRAGARGYVLKDTDPDVIIDALRT 169 Query: 124 VLRGECYFTQKLASYLITHSGNYRYN-STESALLTHREKEILNKLRIGASNNEIARSLFI 182 V G ++ ++T LT RE++IL L G +N IAR + Sbjct: 170 VAGGGLVLGPRVGPQVLTTLQRQPVELPPPFDRLTPRERDILRHLATGETNARIARRFGL 229 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 SE TV+ L +F K+ V +R QA A D Sbjct: 230 SEKTVRNQLSAVFAKLGVTDRVQAALLARD 259 >UniRef50_A4FAA4 Two component system response regulator n=2 Tax=Actinomycetales RepID=A4FAA4_SACEN Length = 218 Score = 166 bits (422), Expect = 4e-40, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 88/210 (41%), Gaps = 10/210 (4%) Query: 12 TLLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 +LL + L + L+ L + + + ++ + + ++++D+ Sbjct: 3 RILLAEDEQIVRAGLRKILESAGDLTVIAEAGDGAEAVTGVRRHAPDVVVMDIQMPRLDG 62 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + S KIL+L + +G E ++N ++ + G Sbjct: 63 LAATRQITSLPAPP-KILILTMFDFDANVYSAIEAGASGFLLKDARPEELINAIRVIADG 121 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESAL-----LTHREKEILNKLRIGASNNEIARSLFI 182 + + + L++H + +A+ LT RE++IL+ + G SN IA++L Sbjct: 122 DAMLSPSVTRRLLSHFADRNSPRGPTAVRGLDELTPRERQILSLVGGGLSNASIAKTLGA 181 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 +E+TVK H+ L K+ +NR Q A++ Sbjct: 182 TESTVKGHVSRLLMKLDCENRVQLALIAHN 211 >UniRef50_B1WQK4 Two-component response regulator n=19 Tax=Cyanobacteria RepID=B1WQK4_CYAA5 Length = 247 Score = 166 bits (421), Expect = 4e-40, Method: Composition-based stats. Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 10/212 (4%) Query: 8 IHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNI----QRSLDDISSGSIILLDMM 61 I +L++ L L Q L + I G+ + Q++L+ ++++D+ Sbjct: 35 ITSMRILIVEDDPLMQLGLEQALSEHPNFEIIGQAEDGYTGVQQALEL--KPDLVVMDIG 92 Query: 62 EADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGL 121 I + + + NI +++L + + ER++ + Sbjct: 93 LPRLDGIAATKQ-IKEQEPNIHVVMLTSHTLQTEVVAALSSGADAYCIKGASLERLLAAI 151 Query: 122 QGVLRGECYFTQKLASYLITHSGNYRYNSTES-ALLTHREKEILNKLRIGASNNEIARSL 180 + G Y ++A ++ + + ++ ALL+ RE E+L + G SNNEIA L Sbjct: 152 EAAQDGATYLDPQIARLVLDNLKSPNPEPNQNIALLSERELEVLKLIVEGKSNNEIAEDL 211 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 ++S NT+KTH+ + K+AV +R QA A Sbjct: 212 YLSTNTIKTHVRGIMNKLAVDDRVQAAVVALR 243 >UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32 Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ Length = 231 Score = 166 bits (421), Expect = 4e-40, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 90/218 (41%), Gaps = 14/218 (6%) Query: 4 EVHSIHGH-TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLD------DISSGS 54 E HSI +LLI +L + HL + L + G+ + +L Sbjct: 11 EGHSIDAPARVLLIDDHALVRDGMRMHLTLQPDLYVVGEADGGEAALAWLERAGARERPD 70 Query: 55 IILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQ 114 +++ D+ I L + I +L+++ ++ Y G Sbjct: 71 LVITDIGMRGMGGI-ALTAALHEQYPEIAVLVVSMHDNLEYARQAVRAGARGYVLKDAPA 129 Query: 115 ERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNN 174 + ++ ++ VL G +++ ++A + + LT RE++IL + G +N Sbjct: 130 DELMAAIEAVLAGRVFYSARIARGMAEQM----PATGPLDALTRRERDILGCIGRGMANK 185 Query: 175 EIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 EIA L +S TV+TH NL +K+ ++ R V +A + Sbjct: 186 EIATQLGVSVRTVETHRLNLKRKLGIEGRAGLVKYAVE 223 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 166 bits (421), Expect = 4e-40, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 87/206 (42%), Gaps = 5/206 (2%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 +LL+ ++ L L + + + G+ + + ++ + +ILLD+ + Sbjct: 3 GILLVDDHAVLRAGLRLLLESQPDMVVVGEAEDSRTAITQATTLQPDLILLDLSLTNSSG 62 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + Q +L +IL+L +D Y +G ++ ++ VLRG Sbjct: 63 LAAIQ-SLRAAAPQARILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVLRG 121 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 E Y L L+ + L+ RE+E+L + G + EIA L +S TV Sbjct: 122 ELYIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSPKTV 181 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDN 213 +T+ +K+ +++R V +A D+ Sbjct: 182 ETYRTRGMEKLGLRSRAALVQFALDH 207 >UniRef50_A6M052 Two component transcriptional regulator, LuxR family n=8 Tax=Firmicutes RepID=A6M052_CLOB8 Length = 219 Score = 166 bits (421), Expect = 5e-40, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 90/211 (42%), Gaps = 15/211 (7%) Query: 13 LLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKLI 68 ++L+ + + ++ L ++I + N ++ L + IIL+D+ + Sbjct: 4 VVLVDDQQIVREGIKIILSLDNEISILKEAENGKQLLKILQEIQPDIILMDIRMPFMNGV 63 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 + + K NNIK+++L T + Y +G ++ ++ G+ Sbjct: 64 EATK-IVKEKYNNIKVIILTTFNEDEYVLQGIRNGADGYILKDARSHDIIKSIKAAYNGD 122 Query: 129 CYFTQKLASYLITHSGNYRYNSTES----------ALLTHREKEILNKLRIGASNNEIAR 178 + + LI + + S LLT RE ++ + G SN +I Sbjct: 123 ILLDPAVTTKLIRAFNSISIDKQNSRIINKQKKKLELLTQREMDVAKLVAQGNSNKDICH 182 Query: 179 SLFISENTVKTHLYNLFKKIAVKNRTQAVSW 209 +LF++E TVK +L N+F+K+ + +RT+ + Sbjct: 183 TLFLTEGTVKNYLTNIFEKLELSSRTELALF 213 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 166 bits (421), Expect = 5e-40, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 86/212 (40%), Gaps = 8/212 (3%) Query: 5 VHSIHGHTLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDM 60 + + +LL + + T L + + + G+ + +++ ++++D+ Sbjct: 1 MQTTQMIKVLLADDHVIVREGTRELIQRESGMMVVGEASDGVEAVEMSMKVHPDVVVMDI 60 Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 I + + + IL+L E Y +++ Sbjct: 61 AMPRLNGIEATKQ-IKQLLPTTAILILTAYESEQYILAILEAGAASFLLKNVKGTQLLEA 119 Query: 121 LQGVLRGECYFTQKLASYLITHSGNYRYNSTESA---LLTHREKEILNKLRIGASNNEIA 177 ++ V GE +I N + E + LT RE E+L G SN +IA Sbjct: 120 IRAVYAGESVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGVSNKDIA 179 Query: 178 RSLFISENTVKTHLYNLFKKIAVKNRTQAVSW 209 L++S T++THL N+FKK++V +RT+A+ + Sbjct: 180 DQLYLSNRTIQTHLSNIFKKLSVGSRTEAILY 211 >UniRef50_A9B4P1 Two component transcriptional regulator, LuxR family n=11 Tax=Bacteria RepID=A9B4P1_HERA2 Length = 257 Score = 166 bits (421), Expect = 5e-40, Method: Composition-based stats. Identities = 49/223 (21%), Positives = 100/223 (44%), Gaps = 22/223 (9%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +L++ L + ++ + I G+ + + L IS ++L D+ + Sbjct: 6 KVLMVDDHPLFRQGVRWALSSERDIKIIGEGSSAEEGLVLISEHEPDVVLTDLNLPNMDG 65 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + + T+ R+ NI +++L+ E + + + + L+ V RG Sbjct: 66 LEFTR-TIRRQYPNIGVVMLSVYESDEHAFNALRAGAAAYYSKEISPKTLATVLRRVARG 124 Query: 128 ECYF------TQKLASYLITHSGNYRY--------NSTESALLTHREKEILNKLRIGASN 173 E ++A ++T + + + + L+ RE E+L + GA+N Sbjct: 125 EYVINDVMFEDPRVADRILTQFRGLQTGIVAEPDLDISLFSPLSDREIEVLEHIASGATN 184 Query: 174 NEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR 216 +IA +L IS TVK H+ ++ +K+++ +RTQAV +A LRR Sbjct: 185 KDIADALKISTQTVKNHISSILRKLSLNDRTQAVLYA---LRR 224 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 166 bits (421), Expect = 5e-40, Method: Composition-based stats. Identities = 44/210 (20%), Positives = 93/210 (44%), Gaps = 9/210 (4%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 ++L ++ L L + + L + G+ + + ++D + ++LLD+ Sbjct: 6 RIVLADDHAVLRAGLKVLLNAEPDLEVIGEASDGEEAIDRVDDLHPDLVLLDLTMPKLNG 65 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + ++ L K+ ++KIL+L +D Y G +++ ++ V RG Sbjct: 66 VDCIEELLK-KHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIRTVARG 124 Query: 128 ECYFTQKLAS----YLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 E + +A+ + S + L+ RE E+L L +G +N +IA L +S Sbjct: 125 EMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIADLLHVS 184 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 TV+T+ + +K+ + R + V +A +N Sbjct: 185 VKTVETYKARVMEKLEMHKRAELVRYAMEN 214 >UniRef50_C0GHS5 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHS5_9FIRM Length = 219 Score = 166 bits (421), Expect = 5e-40, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 89/202 (44%), Gaps = 6/202 (2%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 + ++ + L + L I G+ + + ++ + ++LLD+ Sbjct: 5 KIFIVDDHEVVRLGLQGLFARYEELEIVGEAASGEEAVQVVPVIKPDVVLLDVRLQGIHG 64 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + S IK+++L++ + + V+ ++ V++G Sbjct: 65 ADTCRLITSAV-PGIKVVMLSSFAEPEEVQAAFTAGASAYVLKNITSGNVIKAIKAVMQG 123 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 E + ++ +++ + S + + L+ RE+EIL+ + G +N EI R LF+SE TV Sbjct: 124 ESFIDPEITEQVMSLIRGEKAAS-QISGLSKREEEILHLVGEGKTNKEIGRELFLSEKTV 182 Query: 188 KTHLYNLFKKIAVKNRTQAVSW 209 + H+ + K+ V NR+QA ++ Sbjct: 183 RNHVSRILDKLGVSNRSQAAAF 204 >UniRef50_B5JTE5 Two-component system regulatory protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTE5_9GAMM Length = 213 Score = 166 bits (420), Expect = 5e-40, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 90/207 (43%), Gaps = 6/207 (2%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 ++++ +L + L + + G+ + + +L I S ++L+D+ Sbjct: 3 RVVIVDDQTLVRHGIANLLGMSDKVEVVGEAGDGESALYLIPQVSPDVVLMDIRMPGLSG 62 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + + +N ++LL T ED G + ++ L+ V+ G Sbjct: 63 LDVLRKLRASDDNTPPVILLTTFEDQDTLQQAIRLGAKGYLLKDVTLDNLLASLELVMAG 122 Query: 128 ECYFTQKLASYL--ITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 + F ++ ++ + + + ++ LT RE I+ + GASN EIA L + Sbjct: 123 QSVFDNRINHRTDDVSAASRSQASLGDAYDLTAREVNIIELMSEGASNKEIAFRLDLKMG 182 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWAND 212 TVK ++ ++ K+ V++RTQAV + Sbjct: 183 TVKNYVSSVLLKLGVRDRTQAVIKIKE 209 >UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 Tax=Bacillales RepID=C0Z7M8_BREBN Length = 602 Score = 166 bits (420), Expect = 6e-40, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 84/215 (39%), Gaps = 16/215 (7%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 L+++ S +L L+ + L + G + ++++ ++L+D+ + Sbjct: 384 RLVIVDDHSFIRESLRSILEGQRDLRVVGLAEDGAQAVELCEELEPDLVLMDLEMPNMDG 443 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + K I+IL+L+T +D +G + + ++ V RG Sbjct: 444 ITATKR-IKEKWPGIRILVLSTFQDTEKAKEIMRSGADGYLLKSIESRELAETIRLVHRG 502 Query: 128 ECYFTQKLASYLITHSG-----------NYRYNSTESALLTHREKEILNKLRIGASNNEI 176 Q L ++ + LT RE+EIL L G I Sbjct: 503 GTMIAQDLFHKMLDGQPVNGQEDLLVAPKQSEKDENAYGLTKREQEILQMLAQGMRYKTI 562 Query: 177 ARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAN 211 A L++S+ TV+ + L+ K+ V+NR AV Sbjct: 563 ASKLYLSDGTVRNYASALYDKLGVRNRDDAVQKGK 597 >UniRef50_Q1D523 DNA-binding response regulator, LuxR family n=2 Tax=Cystobacterineae RepID=Q1D523_MYXXD Length = 246 Score = 166 bits (420), Expect = 6e-40, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 89/219 (40%), Gaps = 24/219 (10%) Query: 12 TLLLITKSS--LQATALLQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 + ++ + L+ L + I G + + +L+++ ++LLD+ Sbjct: 18 RVFVVEDQTKILKNQLRLFENHPEMDIIGTALSGEAALEEVPKLMPDVLLLDLGLPRMSG 77 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I ++ + I+IL+ ++ +G ++++ ++ V G Sbjct: 78 IDVTREV-KARFPKIEILIFTIFDEEDKVLEAVKAGASGYLLKGAPVDKIIEAIKEVRAG 136 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESAL-------------------LTHREKEILNKLR 168 LA L+ H S + L+ RE+EIL + Sbjct: 137 GTVIQPNLARRLLRHFRVEPDASPLISPPAAPEPSASDLPQEPLLKPLSDREREILQLIA 196 Query: 169 IGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAV 207 G SN+E AR L +S+ T++THL ++++K+ V NR +AV Sbjct: 197 KGVSNSEAARLLDLSKATIRTHLEHIYRKLEVTNRVEAV 235 >UniRef50_B2KE01 Two component transcriptional regulator, LuxR family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KE01_ELUMP Length = 225 Score = 166 bits (420), Expect = 6e-40, Method: Composition-based stats. Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 6/206 (2%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 ++++ +L + L ++ L + G+ + + ++ +IL+D+ Sbjct: 9 RVVIVDDQTLFREGIKDVLTGEKWLEVVGEGSDGEEAVALAKKLKPDVILMDIKLPKLDG 68 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + N I +L+L++ ED + NG M ++N ++ Sbjct: 69 ISATR-KIREDNPAINVLMLSSFEDEAHVIEAIQAGANGYLSKMLPASELLNSIKTFTSE 127 Query: 128 ECYFTQKLASYLITHSGNYRYNSTES-ALLTHREKEILNKLRIGASNNEIARSLFISENT 186 Q+L L+ N T S ALLT E ++++ L G SN E+A L S T Sbjct: 128 GLMIPQQLMGKLLHGLRKMGDNGTPSQALLTRTEIKVISLLGKGLSNKELATELSCSVKT 187 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWAND 212 +K HL + F K+ V +RT+AV A + Sbjct: 188 IKNHLNSAFHKLGVGSRTEAVVKAIE 213 >UniRef50_C1XS11 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XS11_9DEIN Length = 204 Score = 166 bits (420), Expect = 7e-40, Method: Composition-based stats. Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 11/207 (5%) Query: 10 GHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLD--DISSGSIILLDMMEADK 65 LL++ + L L L + G+ + + +L S ++LLD+ +D Sbjct: 2 LLRLLIVDDHPIVREGLKAFLGLYADLEVVGEADSGEEALSKSRALSPDLVLLDLQLSDG 61 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 + + LS N K+L+L + + +G ++ G++ Sbjct: 62 HGLSFLPRFLSLPNPP-KVLILTSFLEEDRLRQALSLGASGYLVKHAGPVALLEGIRAAG 120 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 RGE L R A LT +E+E+L L G SN IA++L +SE Sbjct: 121 RGEVPLDPAAVRLL------ARPARNPLASLTPKEREVLTHLARGMSNKAIAQALGVSEK 174 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWAND 212 T+KTH+ +L K+ +K RTQA A + Sbjct: 175 TIKTHVSSLLAKLNLKGRTQAALLARE 201 >UniRef50_A9KNL7 Two component transcriptional regulator, LuxR family n=28 Tax=Bacteria RepID=A9KNL7_CLOPH Length = 207 Score = 165 bits (419), Expect = 7e-40, Method: Composition-based stats. Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 6/202 (2%) Query: 12 TLLLITKSSLQATALLQHLKQSLAITGKL--HNIQRSLDDISS--GSIILLDMMEADKKL 67 ++++ L ++L L+ I + ++ + ++ ++L+D+ + Sbjct: 2 RIVIVDDDRLVCSSLKVILEMDSEIKVEAIGNDGREAITLYEKYTPDVLLMDIRMSTMSG 61 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + L K+ + KIL L T D Y G +D + + L+ V G Sbjct: 62 IDAAEKILV-KHKDAKILFLTTFSDDEYIVKALKIGAKGYLLK-QDYDSIQPALKAVSMG 119 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 + F + + L + + LT +E E+L + G SN EIA +F+SE TV Sbjct: 120 QSVFGSDVITKLPDLMQKKKEFPYGAYQLTKKEYELLTMVAEGLSNKEIADVMFLSEGTV 179 Query: 188 KTHLYNLFKKIAVKNRTQAVSW 209 + +L NL K+ V++RTQA + Sbjct: 180 RNYLSNLMLKLDVRDRTQAAIF 201 >UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococci RepID=Q9RU37_DEIRA Length = 225 Score = 165 bits (419), Expect = 7e-40, Method: Composition-based stats. Identities = 43/205 (20%), Positives = 86/205 (41%), Gaps = 9/205 (4%) Query: 12 TLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSL--DDISSGSIILLDMMEADKKL 67 +LL+ ++ Q L L + + + G+ N + +L + ++++D+M Sbjct: 15 RVLLVDDHAVVRQGLRLFLGLDEGIEVVGEAANGEEALQEAERLRPEVVVMDLMMPVMDG 74 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I ++ L R+ + +++ L + + + + + + + RG Sbjct: 75 ITATRE-LRRRLPDTEVIALTSTLEENKVNGAIEAGAISYMLKDASSDTLADAIHAAARG 133 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 E + A L+ + + LT +E +L L G SN +IA +SE TV Sbjct: 134 EVRLHPEAARRLVRDFRSPEMRES----LTPKETAVLQLLARGQSNKDIAAEQGVSEATV 189 Query: 188 KTHLYNLFKKIAVKNRTQAVSWAND 212 KTH+ L K+ + +RTQA +A Sbjct: 190 KTHVSRLLSKLGLDSRTQAALYALK 214 >UniRef50_Q0S3P7 Response regulator, two-component system n=11 Tax=Actinomycetales RepID=Q0S3P7_RHOSR Length = 228 Score = 165 bits (419), Expect = 8e-40, Method: Composition-based stats. Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 9/205 (4%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 L+L+ ++ L L+ L + G+ ++Q +L + + ++L+D+ + Sbjct: 21 KLVLVDDHAILRQGLRSVLEREPDLEVVGEASSMQEALAVVGDVAPDVVLMDLKLSAASD 80 Query: 68 IH--YWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 LS + + +L+L T D G D +V ++ V Sbjct: 81 YEGLALCAQLSAADGTMGLLVLTTFLDEQLVVRAIHAGARGYVVKDVDTTELVRAIRAVS 140 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 RGE F + AS +I +T LT RE E+L L G SN +I LFIS Sbjct: 141 RGESAFDSRSASAVIRSLNG---QTTPRDGLTERELEVLQLLAKGLSNAKIGERLFISAT 197 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWA 210 TVK H+ N+ +K+ V R +AV A Sbjct: 198 TVKFHVSNIMRKLDVGRRAEAVYEA 222 >UniRef50_C0YVW6 LuxR family response regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YVW6_9FLAO Length = 210 Score = 165 bits (419), Expect = 9e-40, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 3/184 (1%) Query: 31 KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLN 88 ++ + + + + ++ ++ S ++++D+ D I + L ++ + + ++ Sbjct: 25 QKDMKVIAQFFDGNDAMMNLPGISPDVVMMDIQLQDMLGIEII-EKLRKEMPDTQFIMCT 83 Query: 89 TPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRY 148 + +D G E +++++ ++ V G + +A ++ H N Sbjct: 84 SFDDDEKIFNSLKAGAMGYLVKGESMDKILSSIRDVYSGGAPMSFSIARRVLKHFENKLP 143 Query: 149 NSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVS 208 LT REKEIL L G EIA FIS +TVK H+ N+++K+ V N+ +AV+ Sbjct: 144 EVEGFDELTEREKEILELLSQGLLYKEIADKKFISIDTVKKHVGNIYRKLHVNNKVEAVN 203 Query: 209 WAND 212 N Sbjct: 204 KFNQ 207 >UniRef50_A9AZR3 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZR3_HERA2 Length = 213 Score = 165 bits (419), Expect = 9e-40, Method: Composition-based stats. Identities = 47/206 (22%), Positives = 89/206 (43%), Gaps = 8/206 (3%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRS--LDDISSGSIILLDMMEADKKL 67 ++L+ ++ L L I G+ N + L + +IL+D++ + Sbjct: 6 RIMLVDDHAIVREGLRTLLAEDTEFLIVGEAQNGADAIELAAVVRPHVILMDLVMPNVDG 65 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I Q L + +I++L + D + +G + + ++ V G Sbjct: 66 IQATQ-ALQSLMPSSRIIVLTSFSDDQWVSKAIQAGASGYLLKNVLKAELFLAIRTVANG 124 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 + + + L+ S + LT RE+ +L+ + G SN EIARSL ++E TV Sbjct: 125 QPFLHAEAQRTLMRQS---TAPPSLLPSLTERERSVLDGIVGGLSNKEIARSLHLTEGTV 181 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDN 213 K ++ + K+AV +RTQA +A + Sbjct: 182 KGYVSTILTKLAVADRTQAALYAIKH 207 >UniRef50_Q0A822 Two component transcriptional regulator, LuxR family n=2 Tax=Ectothiorhodospiraceae RepID=Q0A822_ALHEH Length = 221 Score = 165 bits (418), Expect = 9e-40, Method: Composition-based stats. Identities = 51/212 (24%), Positives = 87/212 (41%), Gaps = 12/212 (5%) Query: 12 TLLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADKKLIH 69 LLL+ +L AL L Q +L + S ++LLD+ + Sbjct: 2 RLLLVDDHTLLRVALGDMLSQHGYQVEHAGTEIEALSALAKSPPDVVLLDLRMPGSGGLE 61 Query: 70 YWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGEC 129 + SR ++ + +++L + ++ NG + ++ GL+ VL G+ Sbjct: 62 VLKRIRSR-DSELPVVMLTSSDEERDLLQALQAGANGYLVKDAEPAELIQGLEKVLAGQT 120 Query: 130 YFTQKLASYLI---------THSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL 180 +L L+ A LT RE+EIL + SN IAR L Sbjct: 121 AVASRLTDTLVQMMAGGRSQREGAEASRPPDPFAALTPREREILMHVARAESNKVIAREL 180 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 +S+ TVK H+ ++ +K+ VK+R +A A D Sbjct: 181 GVSDGTVKLHIKSILRKLGVKSRVEAAVKAVD 212 >UniRef50_C6W1C9 Two component transcriptional regulator, LuxR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W1C9_DYAFD Length = 210 Score = 165 bits (418), Expect = 9e-40, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 82/197 (41%), Gaps = 4/197 (2%) Query: 18 KSSLQATALLQHLKQSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADKKLIHYWQDTL 75 + L + A+L +L G N + DI S ++L+D+ I + + Sbjct: 12 QERLNSVAMLLNLSADFICAGTFPNAGNLVADITASKPDLVLMDIDMPGLDGIEATR-LV 70 Query: 76 SRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKL 135 + + + +L+ E+ NG ER + L+ L G T + Sbjct: 71 RKHFDALPVLIQTNFEEDDRIFGSLRAGANGYLLKKTSPERFLESLREALDGGAPMTGSI 130 Query: 136 ASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLF 195 A+ ++ H + + LT REK+IL L G S IA IS NTV H+ N++ Sbjct: 131 AARVLRHFS-AESEAKKDYHLTEREKQILGFLVKGYSYKLIAAECTISYNTVNNHIRNIY 189 Query: 196 KKIAVKNRTQAVSWAND 212 K+ V + T+AVS A Sbjct: 190 DKLYVNSATEAVSLAIK 206 >UniRef50_C1Z9N2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Planctomyces limnophilus DSM 3776 RepID=C1Z9N2_PLALI Length = 220 Score = 165 bits (418), Expect = 9e-40, Method: Composition-based stats. Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 9/209 (4%) Query: 13 LLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSL---DDISSGSIILLDMMEADKKL 67 + LI + AL + + + + +L + S+ +ILLD+ Sbjct: 10 IWLIEDNQSFRRALSKTIDAMPAYHCAANFSTAEEALTALEVQSAPELILLDIGLPGMNG 69 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + L + +KI++L +D+ +G E + ++ VL G Sbjct: 70 ISAMK-PLRAASPALKIIILTVFDDHNRIFGAICAGADGYLLKTSSAEEIARAIEEVLSG 128 Query: 128 ECYFTQKLASYLITHSGNYRYNST---ESALLTHREKEILNKLRIGASNNEIARSLFISE 184 T ++A ++ N +T + L+ RE+++L ++ G + +EIAR+L +S Sbjct: 129 GASMTPQIARKVLELMSNTPPKATVPKSPSDLSLREQDVLKQVVRGLTKDEIARALKLSP 188 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 +T+ THL N+++K+ V NR AV+ A + Sbjct: 189 HTIDTHLRNIYQKLHVHNRAGAVAIAIRD 217 >UniRef50_A8L345 Two component transcriptional regulator, LuxR family n=33 Tax=Bacteria RepID=A8L345_FRASN Length = 249 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 84/215 (39%), Gaps = 14/215 (6%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +++ + T L + + + + G + +R+++ + L+D+ Sbjct: 24 RVVVADDQEIVRTGLRMILDAQPGIVVVGVAVDGRRAVELARRLRPDVCLIDIRMPVMDG 83 Query: 68 IHYWQDTLSRKNNNIK----ILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 I TL+ + ++++ T + Y G + + + Sbjct: 84 IQA---TLALAGPGVADPLAVVVITTFDLDEYVYAALRAGARGFLLKDAGPDLLAQAVHA 140 Query: 124 VLRGECYFTQKLASYLITH---SGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL 180 G+ + + L+ SG + LT RE+++L + G +N+EIA L Sbjct: 141 AACGDALIAPNVTARLLATFAGSGPAPVPAQPVEALTDREEQVLATVAGGRTNSEIAADL 200 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLR 215 IS +TVKTH+ +L K+ +NR + WA R Sbjct: 201 HISLSTVKTHIASLMAKLGARNRVEIALWAYQTGR 235 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 93/210 (44%), Gaps = 9/210 (4%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 ++L+ + + L L + + + + + +++ + + II++D+ Sbjct: 4 RIMLVDDHPVFRSGLKHILCTEADYHVIAEADDGESAIEMAAEANPDIIIMDISMPGLDG 63 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I ++ + RK +I+IL+L D + +G +V+ ++ V+ G Sbjct: 64 IEVTRE-IKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVHAVKLVMNG 122 Query: 128 ECYFTQKLASYLITHSGNYR----YNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 E Y L L + + +S ++ L+ RE+E+L + +G + EI+ LFIS Sbjct: 123 EHYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEISTELFIS 182 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 TV T+ + +KI K ++ V +A + Sbjct: 183 IKTVDTYKKRVMEKIGSKKKSALVRYALKH 212 >UniRef50_C1XWT0 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=C1XWT0_9DEIN Length = 206 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 42/205 (20%), Positives = 87/205 (42%), Gaps = 9/205 (4%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 + ++ + L + + L + G+ + + ++ ++ S ++L+D+ Sbjct: 3 RVFIVEDHAFTRDGLRVAVGREPDLQVVGEARSAEEGIEQLAHTSADVVLMDIGLPGMDG 62 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + L ++ +++++L + + D ++ ++ G Sbjct: 63 IEATK--LVKERFGVRVVVLTVHQLEAEVLAAMTAGADAYCLKSTDPASLLLAIRAAAIG 120 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 Y ++A ++ G S A L+ RE E+L + G SN EIA+ L IS +TV Sbjct: 121 STYLDPQIAHIVL---GQLSVLSGGQAQLSPRELEVLRLIAEGLSNKEIAQRLGISLSTV 177 Query: 188 KTHLYNLFKKIAVKNRTQAVSWAND 212 KTH+ L K++ +RTQA A Sbjct: 178 KTHIEELLAKLSASDRTQAAIKAVR 202 >UniRef50_C2AL02 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AL02_TSUPA Length = 213 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 86/209 (41%), Gaps = 11/209 (5%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +L++ L +L L + G+ + Q++ D+ + ++L+D+ Sbjct: 3 RVLIVDDQRLIRDSLRMLFDGVDDFEVVGEARDGQQAGDEFARTLPDLVLMDLRMPGADG 62 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + ++ + +++L T +D + G E +++ ++ L G Sbjct: 63 IVGI-ERIKAQDPDAAVVVLTTFDDDDHLYPALRAGAAGFLAKDIAPEDLLDAVRRTLAG 121 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESAL------LTHREKEILNKLRIGASNNEIARSLF 181 + + LI + R ++ A LT RE+E+L + G SN EIA L Sbjct: 122 DVPLSPATVKRLIGQALVARTDAPAPAAAPAEYSLTAREREVLALIGQGLSNAEIAAELH 181 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 ++ TVK+H+ NL K R Q A Sbjct: 182 LAVTTVKSHVTNLLAKTDSSTRLQLALLA 210 >UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID=Q9RPE7_CORDI Length = 233 Score = 164 bits (417), Expect = 1e-39, Method: Composition-based stats. Identities = 45/215 (20%), Positives = 86/215 (40%), Gaps = 17/215 (7%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 T+ L+ L L + + + + ++ + +L++ + +IL+D+ Sbjct: 3 TVGLVDDQQLVRAGFRMVLDSQSDITVAWEANDGKEALENAANTPVDVILMDVQMPVMDG 62 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + + N + +I++L T + Y +G E ++ ++ V Sbjct: 63 LEATKR-IVATNTDTRIIVLTTFDSENYVVGAVEHGASGFLLKDTAPEDLIAAVRTVGEQ 121 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESA------------LLTHREKEILNKLRIGASNNE 175 + + L + + A LT RE+EIL + +G SN E Sbjct: 122 SAVISPAATAVLFKSMRGHAPQTDLVATPGGDINAGLIDPLTPREQEILLLIALGKSNTE 181 Query: 176 IARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 IA LFIS TVKTH+ + K ++R AV +A Sbjct: 182 IAEELFISLPTVKTHVSKVLSKTGSRDRVHAVLFA 216 >UniRef50_C8VWU8 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWU8_DESAS Length = 216 Score = 164 bits (417), Expect = 1e-39, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 85/202 (42%), Gaps = 6/202 (2%) Query: 12 TLLLITKSSLQ--ATALLQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 +++ +L ++ + + + G N Q++++ +S + LLD+ Sbjct: 5 RVVIADDQNLICDGIRIILDSQPDMEVVGIADNGQKAVEFVSACQPDVALLDISMPVMSG 64 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I ++ + +L+L T + Y +G E++V ++ G Sbjct: 65 IEALKE-IKVNYPKTVVLMLTTFDPDEYIIGAFRSGADGYLLKDMTAEKLVVAIRNAFNG 123 Query: 128 ECYFTQKLASYLITH-SGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 +AS +I H + + NS + LT RE EI + G SN I+ +L IS T Sbjct: 124 NVTMPASIASRIIVHIHEDVKKNSLQDYGLTQREIEIAGLMARGFSNELISITLGISLGT 183 Query: 187 VKTHLYNLFKKIAVKNRTQAVS 208 VK ++ ++ K+ +R +A+ Sbjct: 184 VKNYISVIYSKLEANSRQEAIL 205 >UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD Length = 224 Score = 164 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 91/207 (43%), Gaps = 9/207 (4%) Query: 12 TLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSL--DDISSGSIILLDMMEA-DKK 66 ++++ +L Q L+ H + + G+ + +L ++L+D+ Sbjct: 5 RVVIVDDHALVRQGLRLILHGVAGIEVVGECSCGEDALKAAVKDRPDVMLMDVHMPQGLD 64 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I + L + +++++L +D + + ++G+ + +D +V +Q Sbjct: 65 GITTARH-LRQIAPQVRVIMLTMFDDRVHVEKMLDAGVSGIVFKHDDSSEIVAAIQHGQP 123 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 G Y +++ + + + L+ RE E+L L G +N E+A +L IS T Sbjct: 124 GHPYLSRRWGQRANAETVSPSRTAER---LSPRETEVLVLLAQGYTNREVADALHISVKT 180 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDN 213 V+TH ++ ++I + +R V +A N Sbjct: 181 VETHRQHIMRRIGLHSRAALVRYAYQN 207 >UniRef50_A6TUG7 Two component transcriptional regulator, LuxR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TUG7_ALKMQ Length = 201 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 85/202 (42%), Gaps = 11/202 (5%) Query: 12 TLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +L++ L Q+ +L +Q + + +N ++ ++L+D+ Sbjct: 2 KILIVDDDQLVCQSLQVLLSREQDMDVMATANNGAEAITCCRDILPDVVLMDIQMPVMDG 61 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I ++ + ++ I+I++L T +D + G + + L+ + G Sbjct: 62 IQATRE-IKKEWPQIRIMMLTTFQDEQNIRLAISAGAEGYLIKSTEVSSMAQQLRVLFSG 120 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 + L+ + LT RE++I+ + G SN EIA L+ISE TV Sbjct: 121 TSVLDADVLKRLM------QPQRKGFEELTPRERDIVELVVQGLSNREIAEQLYISEGTV 174 Query: 188 KTHLYNLFKKIAVKNRTQAVSW 209 + L + +K+ V++RTQ + Sbjct: 175 RNTLSIILEKLQVRDRTQLAIY 196 >UniRef50_Q4ZV39 Regulatory protein, LuxR:Response regulator receiver n=8 Tax=Pseudomonas RepID=Q4ZV39_PSEU2 Length = 222 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 82/203 (40%), Gaps = 6/203 (2%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 L+L + T + L + G+ + Q+++D I +LD+ Sbjct: 6 RLVLADDHEVTRTGFVSLLAGHPEFEVVGQAADGQQAIDLCQELQPDIAILDIRMPVLNG 65 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + L ++ +K+++ + + + G ++ V++GLQ V RG Sbjct: 66 LGAAR-ILQQRMPGLKVVIFTMDDSTDHLEAAMSAGAVGYLLKDASRDEVIDGLQRVARG 124 Query: 128 ECYFTQKLASYLITHSGNYRYNSTE-SALLTHREKEILNKLRIGASNNEIARSLFISENT 186 E +++ L+ + LT RE+++L + G SN EI L I+ T Sbjct: 125 EEALNSAVSARLLRRMTERNTSGAALPETLTPRERQVLGLVAGGFSNREIGEKLGITTGT 184 Query: 187 VKTHLYNLFKKIAVKNRTQAVSW 209 K H+ + K+ +RTQA Sbjct: 185 AKAHVEKVIGKLGASDRTQAAVR 207 >UniRef50_D1BUI8 Two component transcriptional regulator, LuxR family n=22 Tax=Actinomycetales RepID=D1BUI8_XYLCX Length = 219 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 82/204 (40%), Gaps = 7/204 (3%) Query: 12 TLLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 + L+ + + L+ L + G+ +L + + +++LD+ D Sbjct: 8 RVFLVDDHEVVRRGVADLLEAESDLEVVGEAGTAAEALVRVPALAPDVVVLDVRLPDGDG 67 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + ++ R ++ L+L + +D G +V+ ++ V G Sbjct: 68 VAVCREL--RATTDVACLMLTSFDDDEALFDAIIAGAAGYVLKQVRGTDLVHAIRTVAAG 125 Query: 128 ECYFTQKLASYLITHSG-NYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 A ++ R++ A LT +E+ IL+ + G +N +I LF++E T Sbjct: 126 GSMLDPHAAERVMARMRAQARHDDDPLASLTPQEQRILSLIGQGMTNRQIGAELFLAEKT 185 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWA 210 VK ++ NL K+ ++ R Q A Sbjct: 186 VKNYVSNLLAKLGMERRVQVAVLA 209 >UniRef50_A7K1C7 Transcriptional regulator VpsT n=3 Tax=Vibrio RepID=A7K1C7_VIBSE Length = 222 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 75/216 (34%), Positives = 121/216 (56%), Gaps = 7/216 (3%) Query: 5 VHSIHGHTLLLITKSSLQATALLQHLKQSLAITGKL----HNIQRSLDDISSGSIILLDM 60 + ++LIT+ SLQ++ L L+ L I+ L IQ +LD S I++D Sbjct: 1 MEQQKTRNVILITEGSLQSSLLKDVLETKLGISVALIIPDSLIQGALDS-PLASAIIVDC 59 Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 ++ + + + + +L+N + D+ W + G+FY+ +D + + G Sbjct: 60 SVITDEIFRRYSEFKESQQKDTLEILINCDQSISTEDLFAWRTLAGIFYTSDDIKTLQVG 119 Query: 121 LQGVLRGECYFTQKLASYLITHSGNY--RYNSTESALLTHREKEILNKLRIGASNNEIAR 178 + VL+G+ +F++K + ITH + N A+LT REK+I+ L +GASN +IA Sbjct: 120 IDKVLKGDMWFSRKFSQQYITHLRRHCKPINKNVPAILTKREKQIITFLSMGASNQQIAE 179 Query: 179 SLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 LF+SENTVKTHL+N+FKKI VKNR QA+ WA +N+ Sbjct: 180 QLFVSENTVKTHLHNIFKKIEVKNRVQALIWAKENI 215 >UniRef50_A9U6E4 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6E4_PHYPA Length = 563 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 84/206 (40%), Gaps = 12/206 (5%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 LL++ + +L L +Q + G + +++++ ++L+D+ Sbjct: 359 RLLVVDDHPVIRESLRTLLEEQQDFQVVGTAEDGEQAIELCRQLRPQLVLMDVDMPIVDG 418 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + T+ +I+IL+L T ED ++G + ++ V RG Sbjct: 419 ISASR-TIKESWPHIRILILTTFEDTKQALEALRSGVDGYLLKSMQPLELAETIRTVHRG 477 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESAL-------LTHREKEILNKLRIGASNNEIARSL 180 Q ++ L S++ LT RE EIL + G IA + Sbjct: 478 GTLIEQGMSHKLFAQLEADNSGDDPSSIKASSAYDLTPRELEILQFVSKGLRYKSIASNF 537 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQA 206 ++S+ TV+ + + + K+ V+NR +A Sbjct: 538 YLSDGTVRNYASSAYLKLGVRNREEA 563 >UniRef50_A6CUN0 Transcriptional regulator, LuxR family protein n=2 Tax=Vibrio shilonii AK1 RepID=A6CUN0_9VIBR Length = 227 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 76/219 (34%), Positives = 125/219 (57%), Gaps = 13/219 (5%) Query: 3 NEVHSIHGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQ---RSLDDISSGSI--IL 57 N VH+ LL+ ++SLQ+ L ++Q + IT +L + + RS DD+ + I+ Sbjct: 8 NNVHA------LLLAENSLQSGLLKDSIEQKVPITIRLMSAEKLYRSRDDVVERDVRFII 61 Query: 58 LDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERV 117 +D ++ + + +N+IK +LLN P + + ++ W ++ GVFY+ + E + Sbjct: 62 IDYAAIGHGTATHYHEIIESMDNSIKEILLNAPSNLEHAEMLKWQNLVGVFYASDTIETL 121 Query: 118 VNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTES--ALLTHREKEILNKLRIGASNNE 175 V+G + +L GE + ++KL + + + T LT RE++I+ L GASN E Sbjct: 122 VSGFERILAGELWMSRKLVYEYVNFYRRRQCSKTSPYYTKLTKREQQIIKLLGDGASNTE 181 Query: 176 IARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 IA +LF+SENTVK HL+N FKKI VKNR QA+ W +N+ Sbjct: 182 IADTLFVSENTVKAHLHNAFKKIKVKNRLQALLWVKNNI 220 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 164 bits (415), Expect = 2e-39, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 89/208 (42%), Gaps = 8/208 (3%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLD--DISSGSIILLDMMEADKKL 67 +LL+ ++ L L + L + G++ + + +++ + + ++++D+ Sbjct: 6 RVLLVEDHTIVREGLKALLTATEDLEVVGEVADGRAAVEAAERLAPDVVVMDINMPKLDG 65 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + ++ + K N ++L+L+ + Y +G +V ++ V G Sbjct: 66 VGATRE-IREKVNAPRVLILSMYDGEEYVRPAIRAGASGYLLKGSGLSDLVTAIREVAGG 124 Query: 128 ECYFTQKLASYLITHSGNYR---YNSTESALLTHREKEILNKLRIGASNNEIARSLFISE 184 +F+ +A L+ S R + LT RE+E+L + G S+ EIA+ L +S Sbjct: 125 NAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAKILGLSV 184 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWAND 212 T++ H + K+ V N V A Sbjct: 185 KTIEGHRGRIMAKLGVHNVAGLVRQAIR 212 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 164 bits (415), Expect = 2e-39, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 84/206 (40%), Gaps = 6/206 (2%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +L+ +L L L + + G+ N + ++D +++LD+ ++ Sbjct: 12 RVLIADDHALVREGLRYVLDADPGIEVVGEASNGRTAVDLALQHVPDVVVLDITMPEESG 71 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + L + ++LLL+ + Y +G E + ++ V G Sbjct: 72 LKAAAR-LREALPDTRVLLLSMHDQGEYVREGMRIGTHGYLLKDSAGEELRAAIRAVHAG 130 Query: 128 ECYFTQKLASYLI-THSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 +F+ + L T + + + LLT RE+++L + G +N IA L IS T Sbjct: 131 GTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIAAELGISRRT 190 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWAND 212 V+ H +L +K+ + + +A + Sbjct: 191 VEAHRESLMRKLQIHSVAGLTRFALE 216 >UniRef50_D1V9H6 Two component transcriptional regulator, LuxR family n=2 Tax=Actinomycetales RepID=D1V9H6_9ACTO Length = 219 Score = 164 bits (415), Expect = 2e-39, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 88/210 (41%), Gaps = 9/210 (4%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 ++++ ++ T L + + + + + +++ ++ ++L+D+ Sbjct: 3 RVVIVDDQAIVRTGLARIFGAEDGFDVVAECADGAQAVATVTRLRPDLVLMDVRMPRLDG 62 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + +L L T ++ G E ++ + V G Sbjct: 63 IEATRQLCAAPEPP-PVLALTTFDEDEVLWGVIEAGAQGFVLKDSTAEDLLAAARVVAAG 121 Query: 128 ECYFTQKLASYLITHSGN----YRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 +F +A ++ R + LLT RE ++L L G N EIA++L +S Sbjct: 122 GAWFDPAVAPRMMRAYRGAVASRRREAARLDLLTAREHDVLRLLARGQVNAEIAQALRVS 181 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 TVK+H+ +F+K+ V++R A+ +A D+ Sbjct: 182 PGTVKSHIGAIFEKLGVRDRAAAIVFAFDH 211 >UniRef50_C9Z3C4 Putative two-component system response regulator n=1 Tax=Streptomyces scabiei 87.22 RepID=C9Z3C4_STRSW Length = 221 Score = 164 bits (415), Expect = 2e-39, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 85/206 (41%), Gaps = 6/206 (2%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSL--DDISSGSIILLDMMEADKKL 67 ++LL + +++ + ++ L + G+ + + ++ ++++D+ Sbjct: 4 SVLLADDQDMVRSSMRIMIDVEADLKVVGEASDGEAAIGMAARLRPDVVVMDIRMPRMDG 63 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + S + +L L T + Y G + ++ G++ V RG Sbjct: 64 VAATRSIRSASSPPA-VLALTTFDLDEYLFGTLRAGAAGFVLKQDSAATLLEGIRAVARG 122 Query: 128 ECYFTQKLASYLITHSGNYRYNSTE-SALLTHREKEILNKLRIGASNNEIARSLFISENT 186 E + + LI + A +T RE+++L L SN +IA L I E+T Sbjct: 123 EGFVSPGPTRRLIERVSVPEDTPYQLPAEVTRRERDVLALLGRAMSNTQIAHRLHIEEST 182 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWAND 212 VK H+ NL K+ + R QA A+ Sbjct: 183 VKYHVQNLLTKLDARTRVQAALIASR 208 >UniRef50_A1TJW9 Two component transcriptional regulator, LuxR family n=17 Tax=Betaproteobacteria RepID=A1TJW9_ACIAC Length = 256 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 92/238 (38%), Gaps = 33/238 (13%) Query: 10 GHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEADK 65 + ++ +L L+ L SL + G+ + +L ++LLD Sbjct: 19 LLRVFVVDDHTLFRRGLIALLSQYPSLRVAGEAGDAGEALRLAPPLAPQVLLLDNHLPGV 78 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 + I + L ++++L+L ED G + + + + + Sbjct: 79 RGIDAIRG-LREAMPDVRVLMLTVSEDGEDLAQALRHGAQGYLLKTIEGDLLADAIGRAA 137 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTES----------------------------ALLT 157 RGE + +L L+ + L+ Sbjct: 138 RGEPVVSMELMGKLVAAFQAQGGPPAREPRADAGAAAVAVTQAPAEGTGPGAAGSASPLS 197 Query: 158 HREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLR 215 RE+++L ++ GASN EIAR+L I+E TVK H+ ++ +K+ + +R QA +A++ R Sbjct: 198 AREEDVLREIARGASNKEIARALDIAETTVKIHVQHILRKLGLSSRVQAAVYASERQR 255 >UniRef50_B9ZR28 Transcriptional regulator, LuxR family n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZR28_9GAMM Length = 232 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 64/216 (29%), Positives = 113/216 (52%), Gaps = 9/216 (4%) Query: 2 FNEVHSIHGHTLLLITKSSLQATALLQHLKQS--LAITGKLHNIQRSLDDISSGSIILLD 59 N+ +L++T +S Q+ ++++ + ++TG + + S+ L D Sbjct: 4 LNDDSQ-----VLIVTSASPQSALFIEYVSEKTKCSVTGLEPGSPKVAQTLRDYSLALFD 58 Query: 60 MMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVN 119 D++ I + Q ++ + N P + + + ++ G+FY + + + Sbjct: 59 ASALDERDIGHVQQAVADGAKTV-FAGFNIPNEDEALRLLDVLYLQGIFYKTDQLDLLCK 117 Query: 120 GLQGVLRGECYFTQKLASYLITHSGNYRYNSTESA-LLTHREKEILNKLRIGASNNEIAR 178 G+ +L G+ + ++ L + L+ R N+ A LT RE EIL L G +N IA+ Sbjct: 118 GILCLLNGDFWMSRHLMTRLVRLYRQQRTNTYRPACGLTQRELEILAMLGSGETNMNIAK 177 Query: 179 SLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 LFISE+TVK+HLYN+F+KI VKNRTQA++WA D+L Sbjct: 178 QLFISEHTVKSHLYNIFRKIEVKNRTQAINWAKDHL 213 >UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QGZ7_9SPHI Length = 218 Score = 163 bits (414), Expect = 3e-39, Method: Composition-based stats. Identities = 49/227 (21%), Positives = 97/227 (42%), Gaps = 26/227 (11%) Query: 1 MFNEVHSIHGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDISS-------- 52 M + HSI + L+ + + L I + ++ + LD + Sbjct: 1 MLVDDHSIVRDGIRLLLEQA-----------DGLEIIDEANDGEEVLDKLKVLQPDPSLL 49 Query: 53 GSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSME 112 +IL+D+ I Q +SR N+++L+L+ + Y G Sbjct: 50 PDLILMDISLPGMSGIQTTQ-VISRLYKNVRVLMLSMHNNEDYILRSVEAGAYGYILKDS 108 Query: 113 DQERVVNGLQGVLRGECYFTQKLASYLIT------HSGNYRYNSTESALLTHREKEILNK 166 + ++ ++ + GE Y++ +AS +++ G+ + + L+++EKEIL Sbjct: 109 SSDEMIKAIRTIASGEKYYSSPVASIILSGYMQQLKKGDRHGRAERQSKLSNKEKEILQF 168 Query: 167 LRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 L G S+ EIA L +S TV H N+ +++ V+N + V A ++ Sbjct: 169 LVDGMSSREIAEKLQLSVRTVDNHRANMMRRLQVRNAAELVRMAVED 215 >UniRef50_P31802 Nitrate/nitrite response regulator protein narP n=142 Tax=Bacteria RepID=NARP_ECOLI Length = 215 Score = 163 bits (414), Expect = 3e-39, Method: Composition-based stats. Identities = 44/202 (21%), Positives = 86/202 (42%), Gaps = 6/202 (2%) Query: 11 HTLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 ++++ L + L L + + + ++D + +ILLD+ Sbjct: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + + L R +I++L + +G D E ++ ++ + Sbjct: 67 GLDTL-NALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 G F++++ YL + ++LT RE ++L++L G SN +IA L ISE T Sbjct: 126 GSKVFSERVNQYL-REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 Query: 187 VKTHLYNLFKKIAVKNRTQAVS 208 VK H+ NL +K+ V++R A Sbjct: 185 VKVHIRNLLRKLNVRSRVAATI 206 >UniRef50_A9WVF8 Two component response regulator n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WVF8_RENSM Length = 225 Score = 163 bits (414), Expect = 3e-39, Method: Composition-based stats. Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 12/218 (5%) Query: 7 SIHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS------GSIILL 58 + ++ L +L L L Q + + N + L I+ + LL Sbjct: 12 ARTTISVALADDQALIRDGLATILAFAQDIDVVAIAENGRDVLQQINKLAIDCKPQVTLL 71 Query: 59 DMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVV 118 D+ + ++ LS+ + I++L T +D ++R++ Sbjct: 72 DLQMPVLDGVGTTKELLSQ-YPEMAIIILTTYQDDASISAALAAGARSYLTKDAGRDRIL 130 Query: 119 NGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIAR 178 ++ G+ F +A LI+ + + E LT RE EIL + G +N EIA+ Sbjct: 131 AAIRSTASGQATFDVAVARRLISGLKPSKPSFPE---LTERESEILALIAAGRNNQEIAQ 187 Query: 179 SLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR 216 F+S TVKTH+ N+F K+ +++R QA++ N R Sbjct: 188 ESFVSVATVKTHINNIFAKLQLRDRAQAITLWNSRAGR 225 >UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYF0_9SPHI Length = 218 Score = 163 bits (414), Expect = 3e-39, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 85/211 (40%), Gaps = 10/211 (4%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLD--DISSGSIILLDMMEADKKL 67 + + L L + L ++ + N + +D D +IL+D+ Sbjct: 4 KVAIADDHVLFRKGLVTILELDDNIEVVYGADNGKELIDKVDAQPPDVILMDLKMPVMDG 63 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + + K +K+L+L+ ++ + NG D + +V+ + V+ Sbjct: 64 MEATK-IIKAKYPEVKVLVLSMYDEEKFIIHCLELGANGYLLKNTDPDELVHAIGTVMAK 122 Query: 128 ECYFTQKLASYLITHSGNYRYNS-----TESALLTHREKEILNKLRIGASNNEIARSLFI 182 + YF +++ ++ + S LT RE+E+L + + E+A LFI Sbjct: 123 DFYFNNHISTVMLKGLNQKKRAKGKPQFENSIELTKREQEVLELICKELTTPEMAEKLFI 182 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 S TV+ H NL +K KN V +A N Sbjct: 183 SNRTVEGHRKNLLEKTGAKNTAGLVVFALKN 213 >UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6ADI3_LEIXX Length = 207 Score = 163 bits (414), Expect = 3e-39, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 78/204 (38%), Gaps = 12/204 (5%) Query: 12 TLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQR--SLDDISSGSIILLDMMEA-DKK 66 ++L+ + + L ++ + G + + L + I+L+D+ D Sbjct: 3 RIVLVDDHPILRHGMRTLLDTQEDFEVVGDCGDPEEYRLLLKSARPDIVLMDLALGGDTD 62 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + T + + +L+ T + +G + ++ Sbjct: 63 GVALTAHT-RATSPSTAVLVFTTYDSDADFVRSLDAGASGYLLKDSTPVELFAAIRTARD 121 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 G + +AS L+ LT RE E+L L G +N ++ LF+SE T Sbjct: 122 GGSALSPAVASRLMDRMR------APQESLTPREIEVLALLATGRTNRQVGERLFVSETT 175 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWA 210 VKTH+ ++F K+ V R AVS A Sbjct: 176 VKTHVNHIFTKLGVDTRAAAVSRA 199 >UniRef50_UPI0001788591 two component transcriptional regulator, LuxR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788591 Length = 202 Score = 163 bits (414), Expect = 3e-39, Method: Composition-based stats. Identities = 44/201 (21%), Positives = 83/201 (41%), Gaps = 11/201 (5%) Query: 13 LLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKLI 68 +L++ L Q+ LL + + +T ++ ++ I+L+D+ I Sbjct: 3 ILIVDDDPLVCQSLRLLLSREADMEVTATANDGAAAIQCCEEVLPDIVLMDIRMPGMDGI 62 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 + + +K ++I++L T +D + G + L+ + G Sbjct: 63 QAARQ-IKQKWPQVQIMMLTTFQDEHSIRLALLAGAEGYMLKSTQVSSMAQQLRALASGS 121 Query: 129 CYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVK 188 + L+ R + LT RE +IL + +G SN EIA LFISE TV+ Sbjct: 122 SVVDANVLKTLMLPEKENRSD------LTPRENDILELVALGCSNREIAEQLFISEGTVR 175 Query: 189 THLYNLFKKIAVKNRTQAVSW 209 L + K+ +++RTQ + Sbjct: 176 NTLSIILDKLELRDRTQLAIY 196 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 163 bits (414), Expect = 3e-39, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 88/206 (42%), Gaps = 9/206 (4%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADKKL 67 ++ ++ + L L + I G + +L+ +IL+D+ Sbjct: 10 SVQIVDDHPMVQGGLKACLSFYDDIIIVGSTDDGSDALNKAIELKPDVILMDISMPTMNG 69 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + ++ + K+L+L+ + + G E + ++ V G Sbjct: 70 IDAT-EIITEQLPETKVLILSMHSNPEFVKSAIQAGAVGYLLKDTTSEEIYYAIKAVANG 128 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 + +F+ +A LI + N+ ES LT RE+ +L+ L G ++ EIA+ L IS TV Sbjct: 129 KTHFSSSIAKLLIDNP----VNTNESEKLTTREQVVLSYLAKGKTSKEIAKILNISFRTV 184 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDN 213 + H N+ K+ + + + +S+A + Sbjct: 185 EAHRRNMKTKLGIHSLAKLISYAVKH 210 >UniRef50_Q0HL36 Two component transcriptional regulator, LuxR family n=11 Tax=Gammaproteobacteria RepID=Q0HL36_SHESM Length = 225 Score = 163 bits (414), Expect = 3e-39, Method: Composition-based stats. Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 6/202 (2%) Query: 12 TLLLITKSSL--QATALLQHLKQSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADKKL 67 + L+ L Q A L + Q + ++ + N Q +L + + ++L D+ Sbjct: 19 RVGLVEDQQLVRQGIASLIAISQHIEVSWQAENGQEALKRLQTDAVDVLLSDIRMPVLDG 78 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + L N+I +++L T +D NG ++++ ++ V +G Sbjct: 79 LSLLKQ-LRAAQNSIPVIMLTTFDDSELFLNSLQAGANGFLLKDVSLDKLLEAIEIVAQG 137 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 + + S + T LL+ RE+EIL + G SN EIA ++F++E TV Sbjct: 138 GHLIEPSVLEQMQQSSATAQSGPT-HYLLSEREREILGFMAGGFSNKEIANAVFLAEGTV 196 Query: 188 KTHLYNLFKKIAVKNRTQAVSW 209 K H+ + K+ ++RTQAV Sbjct: 197 KNHVSTILAKLDCRDRTQAVLK 218 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 285 1e-75 UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 282 4e-75 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 274 1e-72 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 274 2e-72 UniRef50_C7MUJ2 Response regulator containing a CheY-like receiv... 274 2e-72 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 273 2e-72 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 271 1e-71 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 270 2e-71 UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 270 2e-71 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 270 2e-71 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 270 3e-71 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 269 3e-71 UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 269 4e-71 UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa... 269 5e-71 UniRef50_A3Y699 Putative two component system response regulator... 267 3e-70 UniRef50_B2A8K6 Two component transcriptional regulator, LuxR fa... 265 6e-70 UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=... 265 7e-70 UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax... 264 1e-69 UniRef50_B2J2N1 Two component transcriptional regulator, LuxR fa... 264 1e-69 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 264 2e-69 UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Ac... 263 2e-69 UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus... 263 2e-69 UniRef50_O07528 Uncharacterized transcriptional regulatory prote... 263 3e-69 UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa... 262 7e-69 UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta... 262 7e-69 UniRef50_D1CF52 Two component transcriptional regulator, LuxR fa... 261 9e-69 UniRef50_C6BTX3 Two component transcriptional regulator, LuxR fa... 261 9e-69 UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob... 261 1e-68 UniRef50_B0C955 Two-component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_B0C756 Two-component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_C0WKL5 Response regulator n=6 Tax=Corynebacterium RepID... 260 3e-68 UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa... 259 4e-68 UniRef50_A0K2I9 Two component transcriptional regulator, LuxR fa... 259 5e-68 UniRef50_C1RMQ2 Response regulator containing a CheY-like receiv... 259 6e-68 UniRef50_D1C1C8 Two component transcriptional regulator, LuxR fa... 258 1e-67 UniRef50_P55184 Uncharacterized transcriptional regulatory prote... 257 1e-67 UniRef50_D1VBH1 Two component transcriptional regulator, LuxR fa... 257 1e-67 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 257 1e-67 UniRef50_A5V148 Two component transcriptional regulator, LuxR fa... 257 3e-67 UniRef50_A9AX03 Two component transcriptional regulator, LuxR fa... 257 3e-67 UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides... 257 3e-67 UniRef50_B5JFN7 Response regulator receiver domain protein n=1 T... 257 3e-67 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 257 3e-67 UniRef50_D1C6S1 Two component transcriptional regulator, LuxR fa... 256 4e-67 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 255 5e-67 UniRef50_C7MLQ9 Response regulator containing a CheY-like receiv... 255 8e-67 UniRef50_D1BX47 Two component transcriptional regulator, LuxR fa... 254 1e-66 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 254 2e-66 UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacill... 254 2e-66 UniRef50_C7NKN7 Response regulator containing a CheY-like receiv... 254 2e-66 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 253 3e-66 UniRef50_A3CKH3 Two-component system transcriptional regulator (... 253 3e-66 UniRef50_C3JVF4 Two component transcriptional regulator, LuxR fa... 253 4e-66 UniRef50_C6D0G6 Two component transcriptional regulator, LuxR fa... 253 4e-66 UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=... 252 4e-66 UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri... 252 5e-66 UniRef50_C5C7H0 Response regulator containing a CheY-like receiv... 252 5e-66 UniRef50_UPI0001789139 two component transcriptional regulator, ... 252 6e-66 UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR fa... 252 7e-66 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 252 9e-66 UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa... 251 1e-65 UniRef50_B2J8J5 Two component transcriptional regulator, LuxR fa... 251 1e-65 UniRef50_A7NP18 Two component transcriptional regulator, LuxR fa... 251 1e-65 UniRef50_C5VAN3 Two component transcriptional regulator, LuxR fa... 251 1e-65 UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteri... 250 2e-65 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 250 2e-65 UniRef50_D1BGN7 Response regulator containing a CheY-like receiv... 250 2e-65 UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 249 4e-65 UniRef50_B1ZY58 Two component transcriptional regulator, LuxR fa... 249 5e-65 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 248 6e-65 UniRef50_B8FX94 Two component transcriptional regulator, LuxR fa... 248 7e-65 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 248 7e-65 UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR fa... 248 9e-65 UniRef50_D1CI66 Two component transcriptional regulator, LuxR fa... 248 1e-64 UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V... 248 1e-64 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 248 1e-64 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 248 1e-64 UniRef50_C4DCK3 Response regulator containing a CheY-like receiv... 248 1e-64 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 247 1e-64 UniRef50_A6TVR4 Two component transcriptional regulator, LuxR fa... 247 1e-64 UniRef50_A5URU4 Two component transcriptional regulator, LuxR fa... 247 1e-64 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 247 1e-64 UniRef50_D1BXU0 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 247 2e-64 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_A9AZR3 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_P94439 Uncharacterized transcriptional regulatory prote... 247 3e-64 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 246 3e-64 UniRef50_UPI0001789C57 two component transcriptional regulator, ... 246 5e-64 UniRef50_C1TL62 Response regulator containing a CheY-like receiv... 246 5e-64 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 246 5e-64 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 245 5e-64 UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacilla... 245 6e-64 UniRef50_C0Z4M7 Two-component response regulator n=7 Tax=Bacilla... 245 6e-64 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 245 7e-64 UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmic... 245 7e-64 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 245 8e-64 UniRef50_C7MN84 Response regulator containing a CheY-like receiv... 245 8e-64 UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomyceta... 245 9e-64 UniRef50_UPI00018507A5 two component LuxR family transcriptional... 245 1e-63 UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibac... 245 1e-63 UniRef50_D1B9T1 Two component transcriptional regulator, LuxR fa... 244 1e-63 UniRef50_C7MRK0 Response regulator containing a CheY-like receiv... 244 2e-63 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 244 2e-63 UniRef50_A8ZMB6 Two-component transcriptional regulator, LuxR fa... 244 2e-63 UniRef50_D0LE76 Response regulator receiver n=2 Tax=Actinomyceta... 244 2e-63 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 243 2e-63 UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob... 243 2e-63 UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR fa... 243 2e-63 UniRef50_Q027R2 Two component transcriptional regulator, LuxR fa... 243 3e-63 UniRef50_A4FAA4 Two component system response regulator n=2 Tax=... 243 3e-63 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 243 3e-63 UniRef50_Q04VJ6 Receiver component of a two-component response r... 243 3e-63 UniRef50_D1BCA8 Two component transcriptional regulator, LuxR fa... 243 3e-63 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 243 3e-63 UniRef50_A8L3K7 Two component transcriptional regulator, LuxR fa... 243 4e-63 UniRef50_A8LG56 Two component transcriptional regulator, LuxR fa... 243 4e-63 UniRef50_C4ZEG3 Two-component response regulator (Extracellular ... 242 5e-63 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 242 5e-63 UniRef50_C0GJ72 Two component transcriptional regulator, LuxR fa... 242 5e-63 UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paeniba... 242 5e-63 UniRef50_C5C8Q1 Response regulator containing a CheY-like receiv... 242 6e-63 UniRef50_C6WIC9 Two component transcriptional regulator, LuxR fa... 242 6e-63 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 242 7e-63 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 242 7e-63 UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Act... 242 7e-63 UniRef50_B9MPQ9 Two component transcriptional regulator, LuxR fa... 242 8e-63 UniRef50_D2PZY5 Two component transcriptional regulator, LuxR fa... 242 9e-63 UniRef50_UPI0001B502C9 two component LuxR family transcriptional... 242 9e-63 UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococc... 241 1e-62 UniRef50_B2A7N5 Two component transcriptional regulator, LuxR fa... 241 1e-62 UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Synt... 241 1e-62 UniRef50_B1L0K3 DNA-binding response regulator, LuxR family n=22... 241 1e-62 UniRef50_Q06YY8 Two-component system response regulator n=2 Tax=... 241 1e-62 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 241 1e-62 UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa... 241 1e-62 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 241 1e-62 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 241 1e-62 UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexac... 241 1e-62 UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermop... 241 1e-62 UniRef50_C3AL44 Response regulator receiver n=3 Tax=Bacillus Rep... 241 1e-62 UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryoc... 240 2e-62 UniRef50_C7R398 Two component transcriptional regulator, LuxR fa... 240 2e-62 UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeoba... 240 2e-62 UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID... 240 2e-62 UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiob... 240 3e-62 UniRef50_A9U739 Predicted protein n=2 Tax=cellular organisms Rep... 240 3e-62 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 240 3e-62 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 240 3e-62 UniRef50_A8L345 Two component transcriptional regulator, LuxR fa... 240 4e-62 UniRef50_D2PZN7 Two component transcriptional regulator, LuxR fa... 239 4e-62 UniRef50_B2JVP2 Two component transcriptional regulator, LuxR fa... 239 4e-62 UniRef50_Q024A4 Two component transcriptional regulator, LuxR fa... 239 4e-62 UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=P... 238 6e-62 UniRef50_D1C3I4 Two component transcriptional regulator, LuxR fa... 238 6e-62 UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ... 238 7e-62 UniRef50_B2JVJ8 Two component transcriptional regulator, LuxR fa... 238 8e-62 UniRef50_C7QC31 Two component transcriptional regulator, LuxR fa... 238 8e-62 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 238 8e-62 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 238 9e-62 UniRef50_C1B8T3 NarL family two-component response regulator n=6... 238 1e-61 UniRef50_A9U6E4 Predicted protein (Fragment) n=1 Tax=Physcomitre... 238 1e-61 UniRef50_B2A6W2 Two component transcriptional regulator, LuxR fa... 238 1e-61 UniRef50_C4DM40 Response regulator containing a CheY-like receiv... 238 1e-61 UniRef50_D2SFS4 Two component transcriptional regulator, LuxR fa... 238 1e-61 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 238 1e-61 UniRef50_A6M052 Two component transcriptional regulator, LuxR fa... 238 1e-61 UniRef50_B4WJL3 Response regulator receiver domain protein n=1 T... 238 1e-61 UniRef50_D2B5Y0 Response regulator receiver protein n=14 Tax=Act... 238 1e-61 UniRef50_A9VLR5 Two component transcriptional regulator, LuxR fa... 237 1e-61 UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 ... 237 2e-61 UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 T... 237 2e-61 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 237 2e-61 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 237 2e-61 UniRef50_C1YGP4 Response regulator containing a CheY-like receiv... 237 2e-61 UniRef50_C0GHS5 Two component transcriptional regulator, LuxR fa... 237 2e-61 UniRef50_Q5WJ71 Two-component response regulator n=5 Tax=Bacilla... 237 2e-61 UniRef50_C6XAG0 Two component transcriptional regulator, LuxR fa... 237 3e-61 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 236 4e-61 UniRef50_B9XAM6 Two component transcriptional regulator, LuxR fa... 236 4e-61 UniRef50_A4FB05 Two component system response regulator n=43 Tax... 236 4e-61 UniRef50_C6CWJ3 Two component transcriptional regulator, LuxR fa... 236 4e-61 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 236 5e-61 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 235 6e-61 UniRef50_C5C4U8 Two component transcriptional regulator, LuxR fa... 235 6e-61 UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family prot... 235 6e-61 UniRef50_C1TRD8 Response regulator containing a CheY-like receiv... 235 8e-61 UniRef50_A9B4P1 Two component transcriptional regulator, LuxR fa... 235 8e-61 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 235 1e-60 UniRef50_C7MXL4 Response regulator containing a CheY-like receiv... 235 1e-60 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 235 1e-60 UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR fa... 234 1e-60 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 234 1e-60 UniRef50_C4RJG1 Two-component system response regulator receiver... 234 1e-60 UniRef50_C2RNB5 Two-component protein Kinase n=1 Tax=Bacillus ce... 234 2e-60 UniRef50_UPI00018742FB two component transcriptional regulator, ... 234 2e-60 UniRef50_A0RGC1 DNA-binding response regulator n=12 Tax=Bacillal... 234 2e-60 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 233 2e-60 UniRef50_UPI000050F8A6 two component transcriptional regulator, ... 233 2e-60 UniRef50_C5SGD8 Two component transcriptional regulator, LuxR fa... 233 2e-60 UniRef50_B8GUD1 Two component transcriptional regulator, LuxR fa... 233 3e-60 UniRef50_C8VWU8 Two component transcriptional regulator, LuxR fa... 233 3e-60 UniRef50_B4B0U5 Two component transcriptional regulator, LuxR fa... 233 4e-60 UniRef50_D0MHE1 Two component transcriptional regulator, LuxR fa... 233 4e-60 UniRef50_C7PPD5 Two component transcriptional regulator, LuxR fa... 233 4e-60 UniRef50_C4RJ91 Two-component system response regulator n=2 Tax=... 233 4e-60 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 232 5e-60 UniRef50_A3WDJ9 Two-component response regulator n=1 Tax=Erythro... 232 5e-60 UniRef50_D1XLE6 Two component transcriptional regulator, LuxR fa... 232 5e-60 UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa... 232 5e-60 UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphy... 232 6e-60 UniRef50_D1BUI8 Two component transcriptional regulator, LuxR fa... 232 6e-60 UniRef50_A8LHM9 Two component transcriptional regulator, LuxR fa... 232 6e-60 UniRef50_C0Z9R4 Two-component hybrid sensor and regulator n=1 Ta... 232 6e-60 UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece... 232 7e-60 UniRef50_A5G586 Two component transcriptional regulator, LuxR fa... 232 7e-60 UniRef50_B5JPJ0 Sigma-70, region 4 family n=3 Tax=Verrucomicrobi... 232 7e-60 UniRef50_C9Z3C4 Putative two-component system response regulator... 231 1e-59 UniRef50_B1WQK4 Two-component response regulator n=19 Tax=Cyanob... 231 1e-59 UniRef50_A6TUG7 Two component transcriptional regulator, LuxR fa... 231 1e-59 UniRef50_C1I7X4 Two-component system response regulator n=1 Tax=... 231 1e-59 UniRef50_C0GF31 Two component transcriptional regulator, LuxR fa... 231 1e-59 UniRef50_B4D831 Two component transcriptional regulator, LuxR fa... 230 2e-59 UniRef50_D1V9H6 Two component transcriptional regulator, LuxR fa... 230 2e-59 UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microsc... 230 2e-59 UniRef50_C8NKN6 Two component response regulator n=3 Tax=Coryneb... 230 2e-59 UniRef50_C1YU02 Response regulator containing a CheY-like receiv... 230 2e-59 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 230 2e-59 UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax... 230 2e-59 UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa... 230 2e-59 UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeoba... 230 3e-59 UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=... 230 3e-59 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 230 3e-59 UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ... 230 4e-59 UniRef50_B4D808 Two component transcriptional regulator, LuxR fa... 230 4e-59 UniRef50_B4D2I0 Two component transcriptional regulator, LuxR fa... 229 4e-59 UniRef50_B6A2W0 Two component transcriptional regulator, LuxR fa... 229 4e-59 UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI... 229 4e-59 UniRef50_B2KE01 Two component transcriptional regulator, LuxR fa... 229 4e-59 UniRef50_C1A730 NarL family two-component response regulator n=1... 229 5e-59 UniRef50_A1VT42 Two component transcriptional regulator, LuxR fa... 229 5e-59 UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=... 229 5e-59 UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 ... 229 5e-59 UniRef50_D2PS71 Two component transcriptional regulator, LuxR fa... 229 5e-59 UniRef50_C4DCC2 Response regulator containing a CheY-like receiv... 229 6e-59 UniRef50_C1XWT0 Two component transcriptional regulator, LuxR fa... 229 6e-59 Sequences not found previously or not previously below threshold: UniRef50_B9XC41 Two component transcriptional regulator, LuxR fa... 237 3e-61 UniRef50_B1VF85 Two-component system response regulator n=3 Tax=... 235 6e-61 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 285 bits (730), Expect = 1e-75, Method: Composition-based stats. Identities = 49/224 (21%), Positives = 89/224 (39%), Gaps = 17/224 (7%) Query: 7 SIHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMME 62 + ++LI L + + L +Q + + + +L + ++++D+ Sbjct: 33 TTMKTRIVLIDDHKLFREGIKRILDFEQDFEVVAEGSDGDEALALVERYKPDVVIMDINM 92 Query: 63 ADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 + + + + K+++L+ +D Y G D + ++ ++ Sbjct: 93 PHVNGVEATRQLI-EAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVR 151 Query: 123 GVLRGECYFTQKLASYLITHSGNYRYNST------------ESALLTHREKEILNKLRIG 170 V G Y K+ L+ LLT RE E+L L G Sbjct: 152 VVAEGGSYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADG 211 Query: 171 ASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 SN IA +L+ISE TVK H+ N+ +K+ V +RTQAV A N Sbjct: 212 KSNKGIADALYISEKTVKNHVSNILQKLNVNDRTQAVVVAIKNG 255 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 282 bits (724), Expect = 4e-75, Method: Composition-based stats. Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 7/216 (3%) Query: 5 VHSIHGHTLLLITKSSLQATALL--QHLKQSLAITGKLHNIQRSLDDISS--GSIILLDM 60 + I T+L+ SL + L+ L + G+ Q +++ +I++D+ Sbjct: 1 MTDIEKITILIADDHSLVREGIRKILELEPDLQVVGEAATGQEAIEMTRRYQPQVIIMDI 60 Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 I + + ++ I IL L +D Y ++G E +V Sbjct: 61 NMPGLNGIEATK-VIRQEWPQIAILALTIHDDEEYIIELLRSGVSGYVLKDISAEELVQA 119 Query: 121 LQGVLRGECYFTQKLASYLITHSGNYRY--NSTESALLTHREKEILNKLRIGASNNEIAR 178 + V RG +A +I + + S LT RE+EIL + +G SN EIAR Sbjct: 120 VYQVARGARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNREIAR 179 Query: 179 SLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 LFISE TVK HL ++F KI V +RTQA +A + Sbjct: 180 ELFISEKTVKNHLTHIFHKIGVSDRTQAALYALKHG 215 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 274 bits (703), Expect = 1e-72, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 88/215 (40%), Gaps = 10/215 (4%) Query: 7 SIHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMME 62 + +L+ +L L L + + + + + ++ + ++LLD+ Sbjct: 83 DVDPIKVLVADDHALFRRGLEMVLRQEPDIQLVAEASDGAEAVARAAETLPDVVLLDVRM 142 Query: 63 ADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 + I + + KI++L ++ G + V ++ Sbjct: 143 PKRTGIEACA-AIKEVCPSAKIIMLTISDEEADLYEAIKAGAMGYLLKEISIDEVAAAIR 201 Query: 123 GVLRGECYFTQKLASYLITHS-----GNYRYNSTESALLTHREKEILNKLRIGASNNEIA 177 V G+ + +AS L+ + + LT RE E+L + G +N +IA Sbjct: 202 AVHGGQSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDIA 261 Query: 178 RSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 + LFISENTVK H+ N+ +K+ + +R +AV +A Sbjct: 262 KQLFISENTVKNHVRNILEKLQLHSRMEAVVYAVR 296 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 274 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 8/220 (3%) Query: 1 MFNEVHSIHGHTLLLITKSSLQATALLQH--LKQSLAITGKLHNIQRSL--DDISSGSII 56 M + S+ +L+ +L L Q L+ + + G + + ++ S ++ Sbjct: 1 MKDRCKSVKKINVLIADDHALVRQGLKQIIELEPDIKVIGLAADGEEAVLKTQQLSPDVV 60 Query: 57 LLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQER 116 LLD+ + I + L ++ IKI++L ED Y NG + E Sbjct: 61 LLDISMPKQNGIQTLRR-LKDMDSTIKIIMLTFHEDREYLFETINLGANGYVLKDAESES 119 Query: 117 VVNGLQGVLRGECYFTQKLASYLITHSGNYR---YNSTESALLTHREKEILNKLRIGASN 173 ++ ++ V +G Y LA+ L+ LT RE E+L L G +N Sbjct: 120 LIKAIRDVYQGLNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINN 179 Query: 174 NEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 EI LFISE TVK H+ N+FKKI V +RTQA +A + Sbjct: 180 KEIGDCLFISEKTVKNHVSNIFKKINVNDRTQAAIYAYKH 219 >UniRef50_C7MUJ2 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=101 Tax=Bacteria RepID=C7MUJ2_SACVD Length = 239 Score = 274 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 91/218 (41%), Gaps = 8/218 (3%) Query: 5 VHSIHGHTLLLITKSSLQATALLQHLKQS--LAITGKLHNIQRSLDDI--SSGSIILLDM 60 ++L L L + + G+ + +++ ++L+D+ Sbjct: 15 DTGDRPLRVVLADDQDLVRAGFRVILSSDDGIEVVGEAGDGWEAVEVATRERADVVLMDV 74 Query: 61 MEADKKLIHYWQDTL--SRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVV 118 + + L + ++ K+++L T + Y +G E ++ Sbjct: 75 QMPKLDGLEATRRLLGPAGADHPTKVIILTTFDREDYLFEALRAGASGFLLKNASPEDLI 134 Query: 119 NGLQGVLRGECYFTQKLASYLITHSGNYRY--NSTESALLTHREKEILNKLRIGASNNEI 176 ++ V RG+ + ++ +I + + LT RE E+L+ L GASN EI Sbjct: 135 ESVRIVARGDALLSPEVTRRVIARFSAPAVTGPTRRPSELTDREFEVLSLLAKGASNAEI 194 Query: 177 ARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 AR L + E TVKTH+ + K+ +++RT AV +A +N Sbjct: 195 ARQLVLGETTVKTHVSRILTKLNLRDRTHAVVFAYENG 232 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 273 bits (700), Expect = 2e-72, Method: Composition-based stats. Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 6/208 (2%) Query: 9 HGHTLLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDISS--GSIILLDMMEAD 64 +LL+ L L L+Q + G+ + + ++ + S ++++D++ Sbjct: 17 EPIRVLLVDDHPLLRHGLRALLEQVGGAEVVGEAGDGEEAIALVLSLNPDVVVMDLVMPG 76 Query: 65 KKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGV 124 I + + R+ ++ +L+L ED G D + ++ V Sbjct: 77 VTGIEATRTLIDRR-PDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVRAV 135 Query: 125 LRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISE 184 RGE + +A I S LT RE+EIL+ L G SN EIAR LF+S+ Sbjct: 136 ARGEAVYGPAVARR-IRRFLTTGPESGPFPELTQREREILDLLASGKSNAEIARRLFLSQ 194 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWAND 212 TVK HL ++F K+ V +RTQAV A Sbjct: 195 KTVKNHLTSIFAKLQVADRTQAVVRARR 222 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 9/217 (4%) Query: 6 HSIHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLD--DISSGSIILLDMM 61 +L++ L ++ L+ + + G+ N + +++ + LLD+ Sbjct: 5 QDESVIKVLVVDDHELFRRGVVTVLRSTPGIYVVGEAGNGREAIECFQTLQPDVTLLDIH 64 Query: 62 EADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGL 121 + + N N KIL+L E +G ER++ + Sbjct: 65 MPVCNGLE-TARKMREANPNTKILMLTVSETEEMLFEAVKSGASGYVLKSVSPERLIECV 123 Query: 122 QGVLRGECYFTQKLASYLITHSGNYR----YNSTESALLTHREKEILNKLRIGASNNEIA 177 + V GE LA +I +S LT RE+E+L L GASN EIA Sbjct: 124 RQVYEGEPVVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIA 183 Query: 178 RSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 R+LFISENTV+ H+ ++ K+ + NR QA ++A N Sbjct: 184 RALFISENTVRNHVRHILDKLHLSNRAQAAAYAVRNG 220 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 270 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 52/221 (23%), Positives = 97/221 (43%), Gaps = 15/221 (6%) Query: 8 IHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDI--SSGSIILLDMMEA 63 + +L++ L + + L+ I G+ + +L S +IL+D+ Sbjct: 1 MSPINILIVDDHPLFRSGIRWSLEQNPQFVIVGEAADGSEALRLADELSPDVILVDLSLP 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + + L R+ +++L +D + + E++++ + Sbjct: 61 GMNGLEVAR-ALKRRQPQAGVIILTMHQDDEQLFNAIRAGASAYCTKDIEPEQLIDVITR 119 Query: 124 VLRGECYFT------QKLASYLITHSGN----YRYNSTESALLTHREKEILNKLRIGASN 173 V RGE +AS ++ R +S + LT RE EIL+ + G SN Sbjct: 120 VARGEYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVARGYSN 179 Query: 174 NEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 EIA++L IS+ TVK H+ ++ +K+AV +RTQAV +A + Sbjct: 180 KEIAQALNISDQTVKNHITSILRKLAVNDRTQAVIYALRHG 220 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 270 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 5/210 (2%) Query: 8 IHGHTLLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDIS--SGSIILLDMMEA 63 +L++ + A+ L+ + + G+ + L+ + IL+D+ Sbjct: 2 RKMIKILVVDDHAFLRDAIRSILEDESDMNVVGEASSGDGVLEKVEACRPDCILMDINLP 61 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 K I + + + N ++L+ E Y +G E+VV ++ Sbjct: 62 GKNGIEAT-ELVKKNYPNCRVLVFTMYEHDEYLMDALQAGADGYLLKDSSSEQVVAAIRM 120 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 + RG+ ++ LIT+ + LT REKEIL +L G SN EIA +L+IS Sbjct: 121 LYRGDSVIHPRMTKKLITYHQQKMKVESNENELTEREKEILFELVKGLSNKEIAEALYIS 180 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 + TVK H+ +FKK+ VK+R+QAV +A N Sbjct: 181 DKTVKIHINKIFKKLNVKSRSQAVIYAVRN 210 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 270 bits (692), Expect = 2e-71, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 88/209 (42%), Gaps = 5/209 (2%) Query: 8 IHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEA 63 TLLL+ + + L+ L + G+ + + ++ +IL+D+ Sbjct: 12 TRPITLLLVDDHPVVRKGTRELLEGEADLRVVGEAESGEEAILKARQLMPDVILMDVSMP 71 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 I + + + + IL+L + +D Y G ++ ++ ++ Sbjct: 72 GMNGIEATR-AIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVRA 130 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 V GE +A ++ ++ + L+ RE E+L G +N EIAR L IS Sbjct: 131 VAAGESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLDIS 190 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 TV+ HL N+F K+ V +RT+AV + Sbjct: 191 PRTVQVHLANIFSKLGVGSRTEAVLYGIK 219 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 8/211 (3%) Query: 9 HGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEAD 64 LL+ L L + L + +++ G++ N Q+++D I+L+D+ Sbjct: 3 TSIKLLIADDHILIREGLRKILSIEPHISVVGEVTNGQQAVDYCLKNPVDIVLMDINMPI 62 Query: 65 KKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGV 124 I + + + N NI I+ L + Y I+G ++++ + GV Sbjct: 63 MNGIEACRQ-IKKLNPNIGIIALTIHDQDEYLFELIKYGISGYVLKDIHPDQLIKTILGV 121 Query: 125 LRGECYFTQKLASYLITHSGNYRY---NSTESALLTHREKEILNKLRIGASNNEIARSLF 181 +GE + L + ++ + + LT RE E+L ++ G SN IA +L+ Sbjct: 122 AQGESFIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIANALY 181 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 ISE TVK HL N+F+KI V +RTQA +A Sbjct: 182 ISEKTVKNHLTNIFQKIGVADRTQAALYAIK 212 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 269 bits (690), Expect = 3e-71, Method: Composition-based stats. Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 7/211 (3%) Query: 10 GHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADK 65 LLL+ + L+ L ++ I G+ N + +L + ++L+D+ Sbjct: 14 KIKLLLVEDHHIVRRGLVFFLKTREEFEIVGEAENGEDALTFVRTERPDVVLMDLSMPKM 73 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 I + + + + IKIL+L++ + Y +G E++V + + Sbjct: 74 DGIEATKQ-IKQYDETIKILILSSFSEQDYVLPALEAGADGYQLKEVQPEQLVASIIAIY 132 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 G F K+ L+ + ++LT RE+E+L ++ G SN EIA L I+E Sbjct: 133 EGNANFHPKVTPALLG--RSAVKKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHITEQ 190 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWANDNLRR 216 TVKTH+ N+ K+ V +RTQA +A + + Sbjct: 191 TVKTHVSNILAKLEVDDRTQAALYAVKHGEK 221 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 269 bits (689), Expect = 4e-71, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 89/213 (41%), Gaps = 9/213 (4%) Query: 8 IHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEA 63 ++ +L+ ++ L L + + + G+ N + ++ + ++L+D+ Sbjct: 1 MNKIKVLVAEDHTIVRKGLCSLLYSEPDIEVVGEAENGREAIKMVEELAPDVVLMDISMP 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + + + L +K ++KIL+L+ Y +G ++ + Sbjct: 61 ELNGMDATRQ-LKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAIHA 119 Query: 124 VLRGECYFTQKLASYLITHSGNYRY----NSTESALLTHREKEILNKLRIGASNNEIARS 179 G+C+ + ++ +I + + LL+ RE+E+L + G +N EIA Sbjct: 120 AHAGDCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIAGH 179 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 L+IS TV+ H ++ KK+ + + +A Sbjct: 180 LYISPKTVEAHRNHIQKKLGLNGTAELTKYAIR 212 >UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=Q1AVR6_RUBXD Length = 220 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 95/211 (45%), Gaps = 9/211 (4%) Query: 10 GHTLLLITKSSLQATALL--QHLKQSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADK 65 ++++ +L L L++ + + G+ + +L+ + + ++L+D+ Sbjct: 4 PVRVMIVEDQALMREGLRTLLDLEEGVEVVGEAADGVEALERLPGARPEVVLVDVRMPRM 63 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 I + L R++ + ++L T +D Y G E + ++ V Sbjct: 64 DGIQLI-ERLGREHPEVAAIILTTFDDDEYVFRGLRAGARGYILKDTPSEELAAAIEKVH 122 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTESAL----LTHREKEILNKLRIGASNNEIARSLF 181 RGE + +I+ G L+ RE E+L + GASN EIAR+L+ Sbjct: 123 RGEAVLDGPITLKVISELGRLSKGPAGPQPGSGGLSEREMEVLRLVASGASNREIARALY 182 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 I+E TVK H+ ++ +K+ ++RTQA +A + Sbjct: 183 ITEGTVKNHISSILRKLGFRDRTQAALYALE 213 >UniRef50_A3Y699 Putative two component system response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y699_9GAMM Length = 226 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 8/212 (3%) Query: 11 HTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 ++++ +L + L L + + + + N +++ +IL+D+ + Sbjct: 3 IRIVIVDDQALVRSGLSMILDHQSDIEVVAECANGLEAIEAAKKYIPDLILMDIRMPEMD 62 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + L N +I++L+T + Y +G + +V + V + Sbjct: 63 GLSATSAILGDLNIQTRIVILSTFDLDEYIYRALREGASGFILKDTPPDELVAAVHVVAQ 122 Query: 127 GECYFTQKLASYLITHSGNYRYNSTES----ALLTHREKEILNKLRIGASNNEIARSLFI 182 G T + LI + + T LT REKEIL L +G +N+EIA LFI Sbjct: 123 GGALLTPSITKKLIGAFAELKPSHTNVTGHIDRLTTREKEILKNLALGFNNSEIASRLFI 182 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 E+TVKTH+ +L K+ +++R QAV +A +N Sbjct: 183 GESTVKTHVSSLLSKLELRDRAQAVIFAYENG 214 >UniRef50_B2A8K6 Two component transcriptional regulator, LuxR family n=9 Tax=Clostridia RepID=B2A8K6_NATTJ Length = 228 Score = 265 bits (680), Expect = 6e-70, Method: Composition-based stats. Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 13/223 (5%) Query: 2 FNEVHSIHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIIL 57 + +LL +L L + L ++ LA+ G+ N + +D + +IIL Sbjct: 1 MKTMDENKTIRILLADDHALFRQGLKKILDMEEDLAVCGEAQNGEEVVDKVKLLKPNIIL 60 Query: 58 LDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERV 117 +D+ + + + + K++ L ED Y G + + Sbjct: 61 MDINMPLLNGVEATK-YVKEVSPETKVIALTIHEDEEYLFEIVKEGAAGFLLKDVETPTL 119 Query: 118 VNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTE--------SALLTHREKEILNKLRI 169 V +Q V +G + + L+ NS + LT REKEIL + Sbjct: 120 VQAIQEVNKGNSFIHPTITHKLLGEFNRLAQNSPRNIKSDEAVQSELTGREKEILELMAQ 179 Query: 170 GASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 G +N EI++ L+ISE TVK H+ N+ +K+ V +RTQAV A Sbjct: 180 GYTNKEISKELYISEKTVKNHVSNILRKMDVTDRTQAVITALK 222 >UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia (class) RepID=B9L2G4_THERP Length = 246 Score = 265 bits (679), Expect = 7e-70, Method: Composition-based stats. Identities = 47/216 (21%), Positives = 92/216 (42%), Gaps = 6/216 (2%) Query: 4 EVHSIHGHTLLLITKSSLQATALLQHLKQS--LAITGKLHNIQRSLDDIS--SGSIILLD 59 E+ + +L++ L L Q ++ + + G+ N Q +L ++ ++L+D Sbjct: 21 EMGNGRRIRVLIVDDHDLFREGLRQLIETDPAIEVVGEAANGQDALKMVAELQPDVVLMD 80 Query: 60 MMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVN 119 + I + + ++ ++ +L+L +D Y E ++ Sbjct: 81 INMPGMDGIRAT-EAIVQQYRHVHVLMLTMYDDEEYVLHAIRAGARSYLVKNSKPEELLR 139 Query: 120 GLQGVLRGECYFTQKLASYLITHSGNY-RYNSTESALLTHREKEILNKLRIGASNNEIAR 178 + G LA L+ T L+ RE +L L G +N +IA Sbjct: 140 AIHVAAEGGATIDPDLAPILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQIAD 199 Query: 179 SLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 +L ++E+TVK +L LF+K+ V++RTQAV +A + Sbjct: 200 ALNLAESTVKNNLSALFQKLGVRDRTQAVIYAISHG 235 >UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax=Bacillales RepID=DEGU_BREBE Length = 236 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 49/232 (21%), Positives = 97/232 (41%), Gaps = 20/232 (8%) Query: 2 FNEVHSIHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIIL 57 NE + + +++I L + + L + + + + +++ + +IL Sbjct: 1 MNEQVNENKIQIVIIDDHQLFREGVKRILAMEPEFEVVADGEDGENAVELVEKYNPDVIL 60 Query: 58 LDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERV 117 +D+ + +D + ++ ++K+L+L+ +D Y +G D + + Sbjct: 61 MDINMPKVNGVEATRDLI-QRYPDVKVLVLSIHDDESYVTHVLKTGASGYLLKEMDADAL 119 Query: 118 VNGLQGVLRGECYFTQKLASYLITHSGNYRYNST---------------ESALLTHREKE 162 + ++ V +G Y K+ LI +LT RE E Sbjct: 120 IEAVKVVAQGGAYIHPKVTHNLIKEYRRLVNEDEQESSEIGFKEVEYRKPLHILTRRECE 179 Query: 163 ILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 +L + G SN I +L+ISE TVK H+ N+ +K+ V +RTQAV + N Sbjct: 180 VLQLMTDGYSNRMIGEALYISEKTVKNHVSNILQKMNVNDRTQAVVESIKNG 231 >UniRef50_B2J2N1 Two component transcriptional regulator, LuxR family n=12 Tax=Cyanobacteria RepID=B2J2N1_NOSP7 Length = 232 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 55/219 (25%), Positives = 103/219 (47%), Gaps = 12/219 (5%) Query: 1 MFNEVHSIHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSII 56 M N+ S LL++ SL L L+ L + G N + +L+ ++ ++ Sbjct: 1 MKNDKSS--PIRLLIVDDQSLIRQGLKAMLEQEPDLEVVGDAENGKVALELVAELQPDVV 58 Query: 57 LLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQER 116 L+D+ + + + + NIK+L+L+T +D Y G Sbjct: 59 LMDIRMPEMDGRTATK-LIMQSFPNIKVLVLSTFDDDSYLTGAMRAGAKGYLLKDMPSSE 117 Query: 117 VVNGLQGVLRGECYFTQKLASYLI-----THSGNYRYNSTESALLTHREKEILNKLRIGA 171 + + ++ G F L L+ + S N S++ + +T RE+E+L + +GA Sbjct: 118 LADAIRFGHSGYTQFGPGLFDKLLVTEAASASANQNSASSKPSEITAREQEVLCLIGVGA 177 Query: 172 SNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 +N EIA+ L+I+E TVKTH+ ++ ++ +KNR+Q +A Sbjct: 178 TNREIAQQLYITEGTVKTHVTSILSRLNLKNRSQLAIYA 216 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 264 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 6/209 (2%) Query: 10 GHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADK 65 +LL+ + L L+ + + + G+ + + + +IL+D+ Sbjct: 7 RVRVLLVDDHQVVRRGLRTFLEVQEDIEVVGEASDGEEGIARAEELRPDVILMDIKMPGT 66 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 I + L N ++L++ + + G Y D + + ++ V Sbjct: 67 DGIEALRR-LRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAGAIRSVH 125 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 G ++A L+T + +S+ LT RE+E+L+ + G SN EIAR+L +SE Sbjct: 126 AGHVLLQPEVAVALLTQ-DDQGPSSSRGGALTDREREVLSHIADGRSNREIARALVLSEK 184 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 TVKTH+ N+ K+ V +RTQA WA + Sbjct: 185 TVKTHVSNILMKLDVADRTQAALWAVRHG 213 >UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Actinobacteria (class) RepID=D2AX12_STRRD Length = 239 Score = 263 bits (674), Expect = 2e-69, Method: Composition-based stats. Identities = 46/211 (21%), Positives = 87/211 (41%), Gaps = 9/211 (4%) Query: 10 GHTLLLITKSSLQATALLQHLKQS--LAITGKLHNIQRSLDDISS--GSIILLDMMEADK 65 +L++ L L L + G+ N +++ ++++D+ Sbjct: 10 RIRVLIVDDQPLVRRGLSLILSPDPSFEVVGEAENGAQAVTLARRLRPDVVVMDIRMPVL 69 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 + ++ L+ + ++L L+T + Y G E + ++ V Sbjct: 70 DGVGATRE-LAATVPDCRVLALSTFDLDEYVVGALRAGAYGFLPKDSSPEDLSAAIRTVH 128 Query: 126 RGECYFTQKLASYLITHSGNY----RYNSTESALLTHREKEILNKLRIGASNNEIARSLF 181 GE +L + LI+ R T LT RE E+ + G N I+R+L Sbjct: 129 AGEAAVAPRLLTRLISTYVRAPHGTRPTPTGLGELTPREVEVWRLMATGLDNTGISRTLD 188 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 IS +TVK ++ ++F K+AV++R QAV A + Sbjct: 189 ISLSTVKNYITSIFDKLAVRDRAQAVIVAYE 219 >UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA Length = 218 Score = 263 bits (674), Expect = 2e-69, Method: Composition-based stats. Identities = 50/216 (23%), Positives = 96/216 (44%), Gaps = 13/216 (6%) Query: 11 HTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 +L++ +L T + L + + G+ N + +L+ ++S ++L+D+M Sbjct: 3 IRVLIVDDQALIRTGIATLLSRKADIEVVGQAGNGREALELVASLDPDVVLMDVMMPVMD 62 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + + L+ + +++L T D G D + + ++ V Sbjct: 63 GVEATRK-LAERGPRPAVIMLTTFHDDERVLQSIAAGARGYLLKDVDHRVLADSIRTVAG 121 Query: 127 GECYFTQKLASYLITHSGNYRY--------NSTESALLTHREKEILNKLRIGASNNEIAR 178 G ++ + L+ + S +++LT RE++IL L G +N EI Sbjct: 122 GGALIHPQIIAQLLPRLASLAPTPVTASSSPSDVTSILTPRERDILRLLAQGYTNQEIGE 181 Query: 179 SLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 L +S TVK HL +F K+AV++RTQA WA ++L Sbjct: 182 QLALSVGTVKNHLSVIFAKLAVRDRTQAALWAREHL 217 >UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3 Tax=Bacillus RepID=YHCZ_BACSU Length = 214 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 7/207 (3%) Query: 11 HTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKK 66 +++ + L + + + G+ +L I ++L+D+ + Sbjct: 1 MKIVIADDHHVVRKGLRFFFATQDDIEVVGEAATGLEALRVIEETKPDLVLMDLSMPEMD 60 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I + + ++ + I++L + D + + E +V + V Sbjct: 61 GIQAIKKAI-QQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKT-RQVHG 118 Query: 127 GECYFTQKLASYLITHSGNYR-YNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 GE + + +++TH N + LT REK++L ++ G SN EIA +LFISE Sbjct: 119 GEYKLSTAIMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALFISEK 178 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWAND 212 TVKTH+ NL K+ V +RTQA +A Sbjct: 179 TVKTHVSNLLAKLEVADRTQAALFAVK 205 >UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD Length = 220 Score = 262 bits (670), Expect = 7e-69, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 92/208 (44%), Gaps = 5/208 (2%) Query: 9 HGHTLLLITKSSLQATALLQHLKQ-SLAITGKLHNIQRSLDDIS--SGSIILLDMMEADK 65 +L+ + L L+ + + G+ + +++ + ++++D+ Sbjct: 8 EAIRVLITDDHPVFRQGLRGLLEALGVEVVGEAESGPQAVQLAAELQPDVVVMDLHMPGG 67 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 I + T++R + I +L+L D G E + ++ V Sbjct: 68 NGIEATR-TITRTSPRIGVLVLTMFRDDDSVFAAMRAGARGYLLKESGAEEIARAVRAVA 126 Query: 126 RGECYFTQKLASYLITHSGN-YRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISE 184 GE + ++A ++T+ + T LT RE+E+L + G SN EIA++LF+S Sbjct: 127 AGEAIYGPEIARRVLTYFADMPDPKQTAFPELTEREREVLQLIAQGRSNGEIAQTLFLSP 186 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWAND 212 TV+ H+ N+F K+ V +R QA+ A + Sbjct: 187 KTVRNHVSNIFMKLHVADRAQAIVLARE 214 >UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes RepID=LIAR_BACSU Length = 211 Score = 262 bits (670), Expect = 7e-69, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 86/207 (41%), Gaps = 5/207 (2%) Query: 11 HTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADKK 66 +LLI + L L+ + + G+ + + S +IL+D++ Sbjct: 2 IRVLLIDDHEMVRMGLAAFLEAQPDIEVIGEASDGSEGVRLAVELSPDVILMDLVMEGMD 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I + + + KI++L + D + + ++ + Sbjct: 62 GIEATKQICRELS-DPKIIVLTSFIDDDKVYPVIEAGALSYLLKTSKAAEIADAIRAASK 120 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 GE K+A +++ + N+ LT RE EIL + G +N EI LFI+ T Sbjct: 121 GEPKLESKVAGKVLSRLRHSGENALPHESLTKRELEILCLIAEGKTNKEIGEELFITIKT 180 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDN 213 VKTH+ N+ K+ V +RTQA +A+ N Sbjct: 181 VKTHITNILSKLDVSDRTQAAVYAHRN 207 >UniRef50_D1CF52 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=D1CF52_THET1 Length = 1648 Score = 261 bits (669), Expect = 9e-69, Method: Composition-based stats. Identities = 52/217 (23%), Positives = 100/217 (46%), Gaps = 6/217 (2%) Query: 2 FNEVHSIHGHTLLLITKSSLQATALLQHLK-QSLAITGKLHNIQRSLDDIS--SGSIILL 58 ++ + G +++ +L + L+ + + G+ N Q +++ + S ++L+ Sbjct: 1430 IEDMTNKTGLRVVIADDHALFRDGIKSLLESEGFQMVGEASNGQEAVELVHNLSPDLVLM 1489 Query: 59 DMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVV 118 D+ + + +S ++K+++L E+ G + E Sbjct: 1490 DLSMPVMGGLDAIR-LISADKPSVKVIVLTASEEDKDLFEAIKAGAQGFIPKNLESEEFF 1548 Query: 119 NGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGA-SNNEIA 177 L+ V+RGE T +LA LI S+ +LT RE+EIL L G S +++ Sbjct: 1549 QLLRNVIRGEPAITPRLAGKLIDEFSRP-VRSSSLQMLTDREQEILQLLVNGVTSTKDLS 1607 Query: 178 RSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 R L +SE+TVK HL N+ K+ +++R Q V+WA + Sbjct: 1608 RQLGVSEHTVKYHLRNILSKLHLQSRAQVVAWAVQHG 1644 >UniRef50_C6BTX3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX3_DESAD Length = 217 Score = 261 bits (669), Expect = 9e-69, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 86/208 (41%), Gaps = 7/208 (3%) Query: 11 HTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKK 66 +LL+ + + L + + G+ N Q +++ + S IIL+DM+ Sbjct: 5 IKVLLVDDHDIVRIGVRSFLGSFDDIKVVGEAANGQEAVEMTAELSPDIILMDMLMPVMD 64 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I ++ RK +I+ L + G + ++ ++ V R Sbjct: 65 GIQAIREIRDRKLPG-RIIALTSFATDDKLFPAIKAGAMGYLLKDSTPDELLEAIRRVHR 123 Query: 127 GECYFTQKLASYLITHSGNYRYNSTES--ALLTHREKEILNKLRIGASNNEIARSLFISE 184 GE +A +++ +S LT RE + L + G SN IA +F+SE Sbjct: 124 GEPSLAPDIARKVLSELSQPGEDSETPTPDPLTPRELDTLKLVAKGKSNKAIAEEMFVSE 183 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWAND 212 TV+TH+ ++ K+ + NR +A +A Sbjct: 184 ATVRTHMTSILSKLHLANRVEATLYALR 211 >UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY5_SYMTH Length = 218 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 95/208 (45%), Gaps = 7/208 (3%) Query: 11 HTLLLITKSSLQATALLQHLK-QSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +L++ + +L L L + G+ N Q +L+ + ++L+D+ Sbjct: 1 MKVLIVDDHLMLRKGVLSVLSNTDLEVIGEASNGQEALELVPKLKPDLVLMDINMPVLDG 60 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + L + ++K+++L E +G E +V+ L+ + G Sbjct: 61 VEATRK-LKQMYPDLKVVILTVSEIDKDLFEAIKAGADGYLLKNLGPEELVSSLRAAISG 119 Query: 128 ECYFTQKLASYLITHSGNYRYNST---ESALLTHREKEILNKLRIGASNNEIARSLFISE 184 E + +A+ ++ R N+T L+ RE E+L G + EIA L+++E Sbjct: 120 EAPISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTGLTYKEIAAKLYVAE 179 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWAND 212 +TVK H+ ++ +K+ ++NR++AV +A Sbjct: 180 STVKNHMRHILEKLHLRNRSEAVGYAIR 207 >UniRef50_B0C955 Two-component transcriptional regulator, LuxR family n=4 Tax=Cyanobacteria RepID=B0C955_ACAM1 Length = 215 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 47/210 (22%), Positives = 89/210 (42%), Gaps = 7/210 (3%) Query: 11 HTLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRS--LDDISSGSIILLDMMEADKK 66 LLL +L L L L++ L++ G+ + + + L +IL+D+ Sbjct: 2 IRLLLADDQALFRQGLASLLELEEDLSVVGQAQDGRDAILLTQTLQPDVILMDVRMPICD 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + ++ + ++ I+IL+L T ++ Y G ++ ++ + Sbjct: 62 GVEATRE-IHQRFPWIRILVLTTFDEDEYIWTSLQAGALGYLLKSTPASQLAAAIRMLHD 120 Query: 127 GECYFTQKLASYLITHSGNYR--YNSTESALLTHREKEILNKLRIGASNNEIARSLFISE 184 G +A +I L+ RE ++LN + G SN EI++ L ++E Sbjct: 121 GHFQLGPTIAPKVIAQLRPPPLKNEQNHLERLSDRELDVLNLIGQGKSNREISQILHLTE 180 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 TVK ++ L + V++RTQA WA L Sbjct: 181 GTVKNYVSQLLGSLGVRDRTQAALWAQQYL 210 >UniRef50_B0C756 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C756_ACAM1 Length = 224 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 46/211 (21%), Positives = 87/211 (41%), Gaps = 6/211 (2%) Query: 5 VHSIHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDM 60 + + +LL+ + L + + I G+ + + ++ +IL+D+ Sbjct: 2 MTPQNPIRVLLVDDEDIVRYGLKAIAQGTPEIEIVGEAGSGKAAIAQAKTLQPDVILMDI 61 Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 + Q+ +SR + K+L+L T ++ Y G E + Sbjct: 62 NMPQMDGVTATQE-ISRIQPHAKVLILTTHDEAEYLVEAMQQGAVGYLLKNTPPEDFIQS 120 Query: 121 LQGVLRGECYFTQKLASYLITHSGNY-RYNSTESALLTHREKEILNKLRIGASNNEIARS 179 +Q +G L L R +T RE+++L + GASN EI+ + Sbjct: 121 IQQAHKGYLQLGPGLGQKLCQLLKTPVRPQIEAFEGITPREQDVLKLVATGASNREISET 180 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 L I+E TVK H+ ++ ++ V++RTQ WA Sbjct: 181 LHITEKTVKNHVSSILSRVGVQSRTQLAIWA 211 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 45/211 (21%), Positives = 83/211 (39%), Gaps = 6/211 (2%) Query: 7 SIHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMME 62 LL++ + L + + G+ + ++L + ++L+D+ Sbjct: 8 DSSPLRLLIVDDHPIVRDGLRGVFDGEDGFEVVGEASDGAQALVRAAESGPDVVLMDLRM 67 Query: 63 ADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 + + L + +++L+L T + G +E ++ ++ Sbjct: 68 PTMGGVEAIRR-LRVEQPAVRVLVLTTYDTESDVLPAIEAGATGYLLKDAPREDLIRAVR 126 Query: 123 GVLRGECYFTQKLASYLITHSGNYRYNSTES-ALLTHREKEILNKLRIGASNNEIARSLF 181 G+ +A L+T LT RE E+L + G +N E AR LF Sbjct: 127 AAAAGQPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKLF 186 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 ISE TVKTHL + + K V++R AV+ A Sbjct: 187 ISEATVKTHLLHAYAKFGVRDRAAAVAEAYK 217 >UniRef50_C0WKL5 Response regulator n=6 Tax=Corynebacterium RepID=C0WKL5_9CORY Length = 253 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 96/241 (39%), Gaps = 28/241 (11%) Query: 1 MFNEVHSIHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSII 56 M N + L+ L + ++ +++ + + LD II Sbjct: 1 MSNPEQESEPIRIALVDDQPLLRAGFAMLIGSQEDMSVVWQASDGDEVLDLARQEPVDII 60 Query: 57 LLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQER 116 L+D+ A I ++ L + K+++L T +D+ + +G + E Sbjct: 61 LMDVQMARVNGIAATEEVLPE-FPDTKVIMLTTFDDHNFVHGAISAGASGFLLKDVEPEE 119 Query: 117 VVNGLQGVLRGECYFTQKLASYLITHSGNYR-----------------------YNSTES 153 +++ ++ V GE + ++ + ++ + + S Sbjct: 120 LLSAIRTVHSGEAVLSPRITAQVLQQVRSEEGGDSRKAHSASHTAAAAQPGATTATAPPS 179 Query: 154 ALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 A LT RE +IL + +G SN EI+ F+S TVKTH+ ++ K ++R QAV +A + Sbjct: 180 AELTPREMDILRLMALGYSNTEISEEEFVSMATVKTHVRHVLTKTGSRDRVQAVLYAYTH 239 Query: 214 L 214 Sbjct: 240 G 240 >UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4 Tax=Streptomyces RepID=D1XHI5_9ACTO Length = 222 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 86/209 (41%), Gaps = 12/209 (5%) Query: 14 LLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKLIH 69 ++ ++ ++ L + + G + ++ ++ ++L+D+ + Sbjct: 2 VVADDQAIVREGIVMLLGLLPGIEVVGAAKDGDEAVALVAEKAPDVVLMDLRMPRCDGVE 61 Query: 70 YWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGEC 129 + + +++ ++++L T D G E +V + V+ GE Sbjct: 62 ATRR-IRKEHPRTQVVVLTTFADDDSLFTALQAGARGYLTKDARGEEIVQAIDAVMSGEA 120 Query: 130 YFTQKLASYLITHSGNYRYNSTE-------SALLTHREKEILNKLRIGASNNEIARSLFI 182 + K+ L+ LT RE E+L + G SN EIAR+L + Sbjct: 121 GLSPKVQRRLLERVTGSETVPAPCALPSELPDGLTPREAEVLVLIAEGLSNREIARALHV 180 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWAN 211 S TVKTH+ NLF K ++RTQAV +A Sbjct: 181 SAATVKTHINNLFAKTGARDRTQAVRYAY 209 >UniRef50_A0K2I9 Two component transcriptional regulator, LuxR family n=5 Tax=Actinomycetales RepID=A0K2I9_ARTS2 Length = 250 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 86/240 (35%), Gaps = 33/240 (13%) Query: 5 VHSIHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDM 60 ++ +LL+ L L+ L I G+ + ++ + ++L+D+ Sbjct: 1 MNGNTPIKVLLVDDQPLLRMGFRLILEGEDDLRIVGEASDGAEAIRQVREVDPDVVLMDV 60 Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 I + S ++ K+++L T + Y + +V+ Sbjct: 61 RMPVLDGIEATRAVTSS-GSHAKVIILTTFDLDEYAFAGLQAGASAFLLKDVAPSELVSA 119 Query: 121 LQGVLRGECYFTQKLASYLITHSGNYRYNS----------------------------TE 152 ++ V G+ ++ L+ Sbjct: 120 VRVVASGDAVVAPRVTRRLLEAYVREGNPPAVNGQRAGTSAPAAGRGRHSLGEEQQRDPL 179 Query: 153 SALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 LT RE E+L + G SN EIA F+SE TVKTH+ + K+ +++R QAV +A + Sbjct: 180 LEALTPREMEMLEAMAEGLSNAEIAHRFFLSEATVKTHVRRILAKLHLRDRVQAVVYAYE 239 >UniRef50_C1RMQ2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1RMQ2_9CELL Length = 254 Score = 259 bits (663), Expect = 6e-68, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 86/221 (38%), Gaps = 8/221 (3%) Query: 2 FNEVHSIHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSL--DDISSGSIIL 57 + H T+L++ L + L + + + G+ H+ ++ + L Sbjct: 1 MPDGHPRSATTVLVVDDQPLIRQGIRAVLRGQPGVEVVGEAHDGHSAVRTARRLRPDVTL 60 Query: 58 LDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERV 117 +D+ + + + + +++L + + G+ + Sbjct: 61 MDVQMPGMDGVEATRVICADDDPPTSVVVLTMYDQDEHVFEALRAGARGLVLKDAPTSEL 120 Query: 118 VNGLQGVLRGECYFTQKLASYLITHSGNYR----YNSTESALLTHREKEILNKLRIGASN 173 V + G+ + + LI + A LT RE+++ L G S Sbjct: 121 VAAIHAAAAGDSLLSPSVTRRLIEEFARRPTVRMEATDGPAELTARERDVFRLLVQGLST 180 Query: 174 NEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 E A L + ++TVK+H+ +L++K+ V++R QAV +A ++ Sbjct: 181 AEAAERLTLGDSTVKSHVQSLYRKLGVRDRVQAVIYAYEHG 221 >UniRef50_D1C1C8 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1C1C8_SPHTD Length = 237 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 7/215 (3%) Query: 6 HSIHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMM 61 ++LL+ L AL L+ + + G+ + + + +IL+D+ Sbjct: 18 RPAKAISVLLVDDHVLFRQALRHLLEAEPDIRVIGEAGDGRSAQQLAERFHPDVILMDIS 77 Query: 62 EADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGL 121 + +D L N KI++L + + + + +V++ + Sbjct: 78 MPGVDGVTATRD-LKAGIPNTKIIILTMFAEDGHVIRAIRAGADAYLLKNSESSKVIDAI 136 Query: 122 QGVLRGECYFTQKLASYLITHSGNYRY--NSTESALLTHREKEILNKLRIGASNNEIARS 179 + V RGE +LA+ L+ A LT RE ++L + G SN EIA Sbjct: 137 RAVARGESVIEPQLATKLLNEFRRISEFREEETVAGLTEREIQLLRLVASGMSNKEIAAE 196 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 L ++E+TVK L LF+K+ VK+RTQA +A + Sbjct: 197 LSLAESTVKNRLSLLFEKLDVKDRTQAAIYALSHG 231 >UniRef50_P55184 Uncharacterized transcriptional regulatory protein yxjL n=1 Tax=Bacillus subtilis RepID=YXJL_BACSU Length = 218 Score = 257 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 50/215 (23%), Positives = 93/215 (43%), Gaps = 8/215 (3%) Query: 7 SIHGHTLLLITKSSLQATALL--QHLKQSLAITGKLHNIQR--SLDDISSGSIILLDMME 62 + + L L + + + ++G+ + +L + +IL+D+ Sbjct: 2 NKDKIRVALADDQPLVREGFRYVINAQTDMTVSGEAGDGHDIIALAKQTKPDVILMDVQM 61 Query: 63 ADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 I +D +S N KI++L T + Y G E +++ ++ Sbjct: 62 PRCSGIEAAKDIMSAL-PNTKIVILTTFDTEEYVFEGIRAGAVGYLLKDTLPEELIDAIR 120 Query: 123 GVLRGECYFTQKLASYLIT---HSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARS 179 RGE F A+ +I+ + + + T RE E+L ++ G N +IA Sbjct: 121 AAARGEAIFRTVTAAKIISETFRAKQQTHAEELAEPFTKRELEVLQQMAYGLRNEDIAEK 180 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 LF+SE+TVKTH++ + +K ++RTQAV +A N Sbjct: 181 LFVSESTVKTHVHRILQKCNAQDRTQAVVFAIRNG 215 >UniRef50_D1VBH1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=D1VBH1_9ACTO Length = 248 Score = 257 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 82/214 (38%), Gaps = 10/214 (4%) Query: 9 HGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLD--DISSGSIILLDMMEAD 64 +L+ L ++ L + + + ++ ++L+D+ Sbjct: 24 SPIRVLIADDEGLVRAGFRALVEATPDLTVVAEAADGVAAVRESRRLRPDVVLMDIRMPV 83 Query: 65 KKLIHYWQDTLSRK-NNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + + + IL++ T +D Y G E ++ ++ Sbjct: 84 MNGLEATRLIAADAVRPGPGILVVTTFDDDEYVFEALRAGAAGFILKDTQPENLLAAIRT 143 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTES-----ALLTHREKEILNKLRIGASNNEIAR 178 V G+ + LI + LT RE+ +L ++ G SN EIA+ Sbjct: 144 VAAGDALLAPGVTRRLIAAFVRVPAPPASPLTGLASTLTDRERAVLTQIANGYSNAEIAQ 203 Query: 179 SLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 +L++S +TVKTH+ +L K+A ++R Q V A + Sbjct: 204 ALYVSVSTVKTHVGHLLAKLAARDRAQLVIAAYE 237 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 257 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 47/216 (21%), Positives = 86/216 (39%), Gaps = 10/216 (4%) Query: 5 VHSIHGHTLLLITKSSLQATALL--QHLKQSLAITGKLHNIQRSLDDISS------GSII 56 + + ++++ + T L L+ + + + Q ++ + + +I Sbjct: 1 MTGTNTLKVMIVDDHDMVRTGLRTYLMLEPKFEVVAEAGSGQAAISMLEAGLPSGLPDVI 60 Query: 57 LLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQER 116 L+D+M I + + N+KI++L + + E Sbjct: 61 LMDLMMPGMDGIETTRQLIVE-YPNLKIIMLTSFLEDDKVYGAIEAGAVSYVLKTVSAEE 119 Query: 117 VVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEI 176 ++ L G ++G T ++ L S + LT REKE+L + G SN EI Sbjct: 120 LIYALHGAVKGMPVMTADVSQALTRGLRQRTAQSGD-EELTEREKEVLLLIAEGRSNKEI 178 Query: 177 ARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 L IS TVKTH+ NL K +++RTQ A+ Sbjct: 179 GEELHISVKTVKTHVSNLLMKCELEDRTQLAVLAHR 214 >UniRef50_A5V148 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=A5V148_ROSS1 Length = 216 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 91/211 (43%), Gaps = 6/211 (2%) Query: 7 SIHGHTLLLITKSSLQATALL--QHLKQSLAITGKLHNIQRSL--DDISSGSIILLDMME 62 ++L++ +L L L++S+ + G+ + + IIL+D+ Sbjct: 2 QQSDISILIVEDQTLMRQGLRTILDLEESIRVVGEARDGAEGVREALRLRPDIILMDVQM 61 Query: 63 ADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 + + ++ + +I++L T + Y G E ++ ++ Sbjct: 62 PVMNGVEAIRAIIAA-WSQARIIVLTTFDRDDYVFQSVRAGAMGYLLKDAPAEALLQTIR 120 Query: 123 GVLRGECYFTQKLASYLITHSGNYRYNSTESA-LLTHREKEILNKLRIGASNNEIARSLF 181 V GE + ++AS + + R + L+ RE+E+L L G SN EIA L Sbjct: 121 RVHAGEVFIQPEIASRTLREAATGRRRAGTIPFDLSEREREVLVLLAQGLSNREIAGRLS 180 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 I+E TVK H+ N+ K+ +NRTQA + A Sbjct: 181 ITEGTVKNHVSNILAKLQAENRTQAANIARR 211 >UniRef50_A9AX03 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AX03_HERA2 Length = 218 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 89/211 (42%), Gaps = 8/211 (3%) Query: 11 HTLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKK 66 LL+ ++ L + +L L + N + ++ + +IL+D+ Sbjct: 2 IKLLICDDQAVVRDGLSIMLNLAPDLEVIAVASNGREAVQLSATWQPDLILMDLKMPIMN 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I + +S +KIL+L T +D + G +V+ ++G + Sbjct: 62 GIEATRQ-ISAAQPLVKILVLTTYDDDEWLFEAIRAGAAGYLLKDMAHSDLVSAIRGTVS 120 Query: 127 GECYFTQKLASYLITHS---GNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 G+ Y + + L++ N S + LT RE +LN + G +N IA L +S Sbjct: 121 GKAYVDPNVTARLLSQVATSRNQPPASQLTGRLTERELAVLNLIATGHTNASIAEQLRLS 180 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 E TV+ H+ + K+ V +RTQA A ++ Sbjct: 181 EGTVRNHVSTILSKLDVADRTQAALLAVEHG 211 >UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides sp. JS614 RepID=A1SGL7_NOCSJ Length = 213 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 8/206 (3%) Query: 14 LLITKSSLQATALLQHL--KQSLAITGKLHNIQRS--LDDISSGSIILLDMMEADKKLIH 69 L++ L L L + + + G+ + L ++ ++LLD+ + I Sbjct: 2 LVVDDQELFRRGLTMLLGTEAGIEVVGEAGDGVEGTNLAATAAPDVVLLDIRMPKRSGIE 61 Query: 70 YWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGEC 129 + + KI++L ++ +G E V ++ V G+ Sbjct: 62 ACL-AIKEAVPSAKIIMLTVSDEEADLYEAVKSGASGYLLKDSSIEEVAQAVRVVADGQS 120 Query: 130 YFTQKLASYLITHS---GNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 + +A LI + LT RE E+L + G +N EIA+ LFISENT Sbjct: 121 LISPSMAVKLIDEFKQMSRPERDHVPGLRLTERELEVLRLVAKGMNNREIAKELFISENT 180 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWAND 212 VK H+ N+ +K+ + +R +AV +A Sbjct: 181 VKNHVRNILEKLQLHSRMEAVMYAVK 206 >UniRef50_B5JFN7 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFN7_9BACT Length = 220 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 53/216 (24%), Positives = 91/216 (42%), Gaps = 12/216 (5%) Query: 8 IHGHTLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEA 63 ++L +L L L L SL I G+ HN Q +L+ I+L+D+ Sbjct: 2 TDRIQIVLADDQALFLEGLKTLLSLDDSLEIVGECHNGQEALEACRRLRPQIVLMDLNMP 61 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + + + ++ + +L L T +D +G +++V ++ Sbjct: 62 VMDGVAATK-AIKQELPEVNVLTLTTFDDDERVFEALKAGSSGYLLKDTPSKQLVEAIRA 120 Query: 124 VLRGECYFTQKLASYLITHSGN-------YRYNSTESALLTHREKEILNKLRIGASNNEI 176 V GE + +AS ++ + L+ RE+++L L G SN EI Sbjct: 121 VSSGESFLQPSIASKVLAEFSRMSGPAAVKKAPVQLREPLSQREEQVLVWLSRGCSNKEI 180 Query: 177 ARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 A L ++E TVK H+ N+ K+ V +RTQA A D Sbjct: 181 ASHLDLAEGTVKNHVSNVLGKLGVLDRTQAALMARD 216 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 46/213 (21%), Positives = 88/213 (41%), Gaps = 10/213 (4%) Query: 8 IHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS------GSIILLD 59 + ++++ + L +L + + + + +++ + IIL+D Sbjct: 10 MSKIKVMIVDDHDMVRMGLKTYLMQDPGFEVIAEAGDGREAVELLERGLREGQPDIILMD 69 Query: 60 MMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVN 119 +M ++ + ++KI++L + + E ++ Sbjct: 70 LMMPGMNGAEATKEV-RSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVLKTVSAEELIY 128 Query: 120 GLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARS 179 LQG RG T ++A L R + + +T REKE+L + G SN +IA Sbjct: 129 ALQGAYRGMPVMTGEVAQALTRGLRQ-RTVQGDDSGMTEREKEVLLLIAEGKSNKDIAEE 187 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 L IS TVKTH+ NL K +++RTQ +A+ Sbjct: 188 LHISIKTVKTHVSNLLMKCELEDRTQLAIYAHR 220 >UniRef50_D1C6S1 Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S1_SPHTD Length = 223 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 45/214 (21%), Positives = 96/214 (44%), Gaps = 8/214 (3%) Query: 8 IHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEA 63 + +LLL+ +L L L + + G+ + + +++ ++L+D+ Sbjct: 1 MSQISLLLVDDHALFREGLASLLSYQPDFTVVGEAASGEEAVERARELVPDVVLMDIDLP 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 I + + R+ +++++L +D+ G +++ L+G Sbjct: 61 GIDGIEATRR-IKRQLPEVRVVMLTVYDDHERLFQSIKAGAQGYLIKNIRSAELLDQLRG 119 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNST---ESALLTHREKEILNKLRIGASNNEIARSL 180 + RGE ++++A+ ++ + L+ RE E+L + + SN EIA L Sbjct: 120 LARGEAAISRRMAARILEEFARLERQAEILEPDGGLSPREVEVLELVALRLSNKEIAARL 179 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 ISE+TVK HL N+ K+ + +R QA ++A + Sbjct: 180 SISEHTVKNHLKNILAKLQLSSRRQAAAYAVAHG 213 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 255 bits (654), Expect = 5e-67, Method: Composition-based stats. Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 9/209 (4%) Query: 8 IHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEA 63 + +L+ L + + L+ + + + G+ + ++ + ++LLD+ Sbjct: 1 MKPTKVLVADDHDLVREGICKLLELYEDIKVVGEAGDGLETVKGVRDHFPDLVLLDLNMP 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 I + + + IK+L+L ++ Y G E + + Sbjct: 61 RMGGITAIKK-IKEISPGIKVLILTIHDEEEYVYEVIRSGAEGYIQKDVKPEELKRAIDK 119 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 V++G+ F + + + E L+ RE+E+L L G SN +IA+ LFIS Sbjct: 120 VIKGDKVFPRSTENEV----REVVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFIS 175 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 E TVK H+ N+ +K++V +RTQAV A Sbjct: 176 EKTVKNHVSNILRKLSVNDRTQAVIVALK 204 >UniRef50_C7MLQ9 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=29 Tax=Actinobacteria (class) RepID=C7MLQ9_CRYCD Length = 261 Score = 255 bits (653), Expect = 8e-67, Method: Composition-based stats. Identities = 48/217 (22%), Positives = 87/217 (40%), Gaps = 9/217 (4%) Query: 5 VHSIHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLD--DISSGSIILLDM 60 V++ +L++ L L + + G+ N + + ++L+D+ Sbjct: 37 VNTSETVDVLIVDDQDLVRNGFKLILSSYDHVRVVGEASNGIEAYEQSLALRPQVVLMDI 96 Query: 61 MEADKKLIHYWQDTLSRKNN-NIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVN 119 + I + + ++L+L T + Y +G + + +V Sbjct: 97 RMPVEDGIAATRKIVGDTALAQTRVLVLTTFDIDEYVYDALQAGASGFMLKDAEPDDIVR 156 Query: 120 GLQGVLRGECYFTQKLASYLITHSGNYRYNSTESAL----LTHREKEILNKLRIGASNNE 175 ++ V G+ + LI + R ++ +A LT RE+EIL + G SN E Sbjct: 157 AVRTVAAGDALIQPSITRRLIETFVSSRPRTSAAAGGLVDLTDREREILRFVARGMSNEE 216 Query: 176 IARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 IA L IS TVKTHL + K+ +R Q V A + Sbjct: 217 IADDLVISPATVKTHLARIMGKLDAHDRAQLVVAAYE 253 >UniRef50_D1BX47 Two component transcriptional regulator, LuxR family n=14 Tax=Actinomycetales RepID=D1BX47_XYLCX Length = 234 Score = 254 bits (650), Expect = 1e-66, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 82/219 (37%), Gaps = 17/219 (7%) Query: 10 GHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS----SGSIILLDMMEA 63 + L+ + + + + + + + +L + ++L+D+ Sbjct: 9 PIRVALVDDQQMVRAGFRMVIDSQPDMTVVAEAGDGVEALRVLGALPVRADVVLMDVRMP 68 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + L+ + ++++L T + Y +G E ++ ++ Sbjct: 69 RMDGLTATA-ALTSGADAPRVVVLTTFDIDEYVLEAIRSGASGFMLKDAPPEEMLGAIRT 127 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTE----------SALLTHREKEILNKLRIGASN 173 V G+ L+ H A LT RE+E+L + G SN Sbjct: 128 VHAGDAVIAPSSTRRLLEHLVTALPTPAPDTPPSPAHAALATLTDREREVLELMARGRSN 187 Query: 174 NEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 EIA LF++E TVKTH+ + K+ ++R QAV A + Sbjct: 188 TEIAADLFVAEATVKTHVGRILAKLDARDRVQAVVLAYE 226 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 87/206 (42%), Gaps = 5/206 (2%) Query: 11 HTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKK 66 +L++ + L+ L+ + L + G+ + +++ ++L+D+ Sbjct: 2 IRILVVDDHPVVREGLVAILEAQEDLTVVGEAGDGDQAVQQYRDLKPDVVLMDLAMPGTD 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + Q+ + R + N ++++L + +G +E + ++ V R Sbjct: 62 GVQAIQE-IKRIDPNARVVVLTAYDTDERILQAVQAGASGYLLKGAPREDIFRAVRVVYR 120 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 G +A L+ G+ LT RE ++L + G N EIA L I+E T Sbjct: 121 GGSLLEPVVAGKLLNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSITERT 180 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWAND 212 VK H +++K+ V RT+AVS A Sbjct: 181 VKFHANAIYRKLDVSGRTEAVSKAIQ 206 >UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacillus RepID=C3BET8_9BACI Length = 216 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 47/212 (22%), Positives = 90/212 (42%), Gaps = 12/212 (5%) Query: 14 LLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKLIH 69 +++ SL L L +L+ L + G ++ + IIL+D+ + Sbjct: 1 MIVDDQSLIRDGLAMLLNLRSELEVVGTANDGDEVVRIAEQLQPEIILMDIRMPRINGVE 60 Query: 70 YWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGEC 129 + + + ++K+L+L T D +G + + +V + V G Sbjct: 61 GTR-LIRERFPDMKVLMLTTFNDSELIFEALEQGASGYLLKDMETDAIVQAILTVHAGGA 119 Query: 130 YFTQKLASYLITHSGN-------YRYNSTESALLTHREKEILNKLRIGASNNEIARSLFI 182 Q + + ++ + + LT RE ++L ++ +G +N EIA LFI Sbjct: 120 VLPQDITAQIVKELKRTKVVEISGQNQPKQVEQLTEREIDVLREIGLGLNNKEIAEKLFI 179 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 +E TVK H+ NL K+ +++RTQA +A Sbjct: 180 TEGTVKNHVSNLISKLELRDRTQAAIYAVRYG 211 >UniRef50_C7NKN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=138 Tax=Bacteria RepID=C7NKN7_KYTSD Length = 244 Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 86/221 (38%), Gaps = 20/221 (9%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 + L+ SL L + +++ G+ + Q ++D + + ++L+D+ Sbjct: 4 RIFLVDDQSLVRAGFRMVLDAQPDMSVVGEAPDGQSAVDQLKTIAADVVLMDIRMPRLDG 63 Query: 68 IHYWQDTL-SRKNN---NIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 I + L K+ K+++L T + Y +G E ++ ++ Sbjct: 64 IEATRVLLGRDKHPGGAEPKVVVLTTFDMDEYAYAALEAGASGFLLKDAGPEELLAAIRA 123 Query: 124 VLRGECYFTQKLASYLITHS------------GNYRYNSTESALLTHREKEILNKLRIGA 171 V G+ L+ +LT RE E+ + G Sbjct: 124 VASGDAVVAPSTTKRLLERFVPTLTPEVADVASPAEQQEYLREVLTEREYEVFEAVAAGL 183 Query: 172 SNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 SN EIA+ LF++E T+KTH+ L K+ ++R Q V A + Sbjct: 184 SNTEIAKELFVAEATIKTHIGRLLFKLGCRDRVQLVITAYE 224 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 85/211 (40%), Gaps = 9/211 (4%) Query: 8 IHGHTLLLITKSSLQATALL--QHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEA 63 ++ ++L+ + L +L+ + + + + + L ++++D++ Sbjct: 1 MNTIRVMLVDDHEMVRLGLKSYLNLQPDVEVVAEASDGEEGLAKALEVKPDVVVMDLVMP 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + L +I++L + D G + ++ ++ Sbjct: 61 KMTGVEATLALLKE-WPQAQIVILTSYLDNEKIYPVLEAGARGYMLKTSSADEILAAIRK 119 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 V GE ++ + H + + LT RE+EIL L G N IA FIS Sbjct: 120 VALGEYAIETEVEKKVEHH----KRHPDLHDDLTAREREILTLLAKGYDNQRIADESFIS 175 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 TVKTH+ N+ K+AV +RTQAV +A + Sbjct: 176 LKTVKTHVSNILSKLAVSDRTQAVVYAFQHG 206 >UniRef50_A3CKH3 Two-component system transcriptional regulator (CheY domain and HTH-like DNA-binding domain), putative n=30 Tax=Bacteria RepID=A3CKH3_STRSV Length = 227 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 87/213 (40%), Gaps = 12/213 (5%) Query: 11 HTLLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 +L+ +L +L L + + G + + + L+ + +IL+D+ Sbjct: 2 IKVLIADDQALIRESLQIILSAHADIEVVGTVGDGKEVLEKLHRVRPDVILMDIRMPVMD 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + + + + ++KI++L T +D + +G E + +Q V R Sbjct: 62 GVLCTK-AVKEQYPDVKIIILTTFDDDEFIFSALKYGASGYILKGVSTEELHEAIQTVYR 120 Query: 127 GECYFTQKLASYLITHSGNYRYN-------STESALLTHREKEILNKLRIGASNNEIARS 179 G +A+ + + ++ E +I+ ++ G SN EIA Sbjct: 121 GGAMINPNIATKVFKIFSQMAQSNFAITVTEENIEDMSRTEWKIIQQIGFGISNKEIAAK 180 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 LF+SE TV+ +L + K+ +++RTQ WA Sbjct: 181 LFLSEGTVRNYLSGILAKLNLRDRTQLAIWAVQ 213 >UniRef50_C3JVF4 Two component transcriptional regulator, LuxR family n=2 Tax=Rhodococcus erythropolis RepID=C3JVF4_RHOER Length = 220 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 85/211 (40%), Gaps = 11/211 (5%) Query: 13 LLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKLI 68 +L+ + L + + G + + + ++L+D+ + Sbjct: 4 VLIADDQQVVRQGFELFLSGHPEIRVVGHAKTGVEAYEQVRALRPDVVLMDIRMPHGDGL 63 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 ++ L+ +++++ T + Y G D E + + + V G Sbjct: 64 TATREVLAE-FPGTRVIVITTFDLDEYVFEALDSGAAGFLLKDADPEELSSAVLTVAEGG 122 Query: 129 CYFTQKLASYLITHSGNYRYNSTESAL------LTHREKEILNKLRIGASNNEIARSLFI 182 + +L S LI + +A L+ RE +++ L G NN+IA SL + Sbjct: 123 SVLSPRLTSRLIVEFARRKPAPMSTARSGSDHGLSAREMDVVQLLSQGLGNNDIADSLSL 182 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 ++TVK+H+ N+ KK+ V+ R Q V WA N Sbjct: 183 EQSTVKSHISNICKKLQVRTRVQIVIWAYRN 213 >UniRef50_C6D0G6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=C6D0G6_PAESJ Length = 225 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 89/214 (41%), Gaps = 14/214 (6%) Query: 10 GHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADK 65 +LL + + L + + G+ HN + +++ I+L+D+ Sbjct: 2 KIKILLADDHQIVLKGISFFLAMQPDFELVGEAHNGKEAVEKAGELQPDIVLMDLNMPIM 61 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 I + ++ +IK+L+L + D + G + +++ ++ Sbjct: 62 DGIEASA-LIKEQHPHIKVLVLTSFADQSHIVPALQTGAIGYMLKDVEPDQLAEAIRSAY 120 Query: 126 RGECYFTQKLASYLITHSG---------NYRYNSTESALLTHREKEILNKLRIGASNNEI 176 +G ++ L++ + LT RE E+L L G SN +I Sbjct: 121 KGNIQLHPDISRALLSRPEPEPRPEPVIQHSNRDKSLEALTPRELEVLELLTKGLSNKDI 180 Query: 177 ARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 A++L ++E TVKTH+ ++ K+ + +RTQA +A Sbjct: 181 AQTLIVAEKTVKTHVSSILSKLDLSDRTQAALFA 214 >UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria RepID=Q09C30_STIAU Length = 213 Score = 252 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 89/209 (42%), Gaps = 8/209 (3%) Query: 11 HTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKK 66 ++L+ +L + L+ L + G+ + + ++ + S ++L+D+ Sbjct: 2 INIVLVDDHALIREGIRSLLEFTPDLHVVGEASDGEEAVKRVRELSPDVVLMDVRMPRMT 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + + + R+ +++LL T ++ + G ++++ + ++ V Sbjct: 62 GLEALR-AMRREAPERRVVLLTTFDEDSVVVEALRAGVKGFLLKDVTRDQLADAIRRVAN 120 Query: 127 GECYFTQKLASYLITHSGNYR---YNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 GE +A + ++ LT RE E++ + G SN EIA L + Sbjct: 121 GETLLPPGVAERVQRGFTEVPQEFPHAELPEGLTRRELEVMRLIARGLSNREIATVLGTA 180 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 E TVK N+ K+ V++RT+AV A + Sbjct: 181 EGTVKNQTSNILAKLGVRDRTRAVLRAME 209 >UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria RepID=C1F9F6_ACIC5 Length = 213 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 43/215 (20%), Positives = 80/215 (37%), Gaps = 13/215 (6%) Query: 2 FNEVHSIHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIIL 57 ++ +L++ + L+ L + + + ++ I + Sbjct: 1 MDDTTHTATIRILVVDDHHIVRQGLVALLNTLPGFEVIAEAGDGVEAIALHREHQPDITI 60 Query: 58 LDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERV 117 +D+ + + ++ +I++L T + G D + + Sbjct: 61 MDLRLPRMNGVEAITR-IREESPGARIVVLTTFDGDEDIYRALQAGARGYLLKGMDADDL 119 Query: 118 VNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIA 177 ++ V G+ +A L + LT RE ++L + G SN EIA Sbjct: 120 TAAIRSVHAGKSRIPTVVAERLAERMSG--------SELTARELDVLRLIVQGRSNREIA 171 Query: 178 RSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 L ISE TVKTH+ NL K+ V +RTQA + A Sbjct: 172 ADLHISEATVKTHINNLLSKLGVSDRTQAATTALQ 206 >UniRef50_C5C7H0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=9 Tax=Bacteria RepID=C5C7H0_MICLC Length = 230 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 91/218 (41%), Gaps = 16/218 (7%) Query: 10 GHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADK 65 + L+ +L + L + + L + + + + ++ + + ++L+D+ + Sbjct: 8 PVRVALVDDQALIRSGLAMLVDSQPDLTVVAEAGSGREAVASVSVAGADVVLMDVRMPEM 67 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 I + L R + ++++L T + Y +G E ++ ++ V Sbjct: 68 DGIEATRALLRRPD-APRVVVLTTFDLDEYAFDAIEAGASGFLLKDAPPEELLAAIRTVH 126 Query: 126 RGECYFTQKLASYLITHSGNY-----------RYNSTESALLTHREKEILNKLRIGASNN 174 RG+ L+TH A LT RE+E+L + GA+N Sbjct: 127 RGDAVIAPSTTRRLLTHMAPRLRSDQVRSAECEEQQAAVASLTPREREVLVLMAQGAANL 186 Query: 175 EIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 EIA L +SE TVKTH+ + K+ ++R QAV A+ Sbjct: 187 EIAAELVLSEATVKTHVGRVLAKLGARDRVQAVLIAHR 224 >UniRef50_UPI0001789139 two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=UPI0001789139 Length = 216 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 85/209 (40%), Gaps = 11/209 (5%) Query: 11 HTLLLITKSSLQATALLQH--LKQSLAITGKLHNIQRSLDDI---SSGSIILLDMMEADK 65 ++L+ +L + + ++ + + +L + ++L+D+ Sbjct: 2 ISVLIADDDPFIRESLKLLVGMDPDIEVSAVAEHGEEALSLLMDGLHADVVLMDIRMPVC 61 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 + + + + ++++L+L T +D Y +G +R++ G++ V Sbjct: 62 DGVEGTRR-IRERYPDVRVLMLTTFDDDDYIVEALRNGASGYLLKNIPPDRIIQGIKTVH 120 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTESAL-----LTHREKEILNKLRIGASNNEIARSL 180 G +A L SA LT EK ++ + G SN EIA L Sbjct: 121 DGNMLIHPDIARKLTGMLRPTPQPVPRSAELEQFGLTPAEKRVVALIAEGLSNKEIAAQL 180 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSW 209 ++SE TVK ++ + K+ +++RTQ + Sbjct: 181 YLSEGTVKNYVTEILGKLNLRDRTQIAIF 209 >UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=C4L5Q6_EXISA Length = 230 Score = 252 bits (645), Expect = 7e-66, Method: Composition-based stats. Identities = 46/224 (20%), Positives = 91/224 (40%), Gaps = 19/224 (8%) Query: 7 SIHGHTLLLITKSSLQATALLQH--LKQSLAITGKLHNIQRSLDDI--SSGSIILLDMME 62 + + ++ L L + L+ + + + ++ I+++D+ Sbjct: 2 EMTQTRIAIVDDHELFREGLKRIFDLEDEFTVVAEGRTGREAIRIAGEQKPEILIMDINM 61 Query: 63 ADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 D I + LS + ++L+L+ +D Y +G +++ ++ Sbjct: 62 PDMNGIEATKQ-LSLLSPETRVLILSIHDDESYITHALEAGASGFLLKEVASTELISAVR 120 Query: 123 GVLRGECYFTQKLASYLITHSGN--------------YRYNSTESALLTHREKEILNKLR 168 V + Y K+ + ++ R + LL+ RE E+L+ L Sbjct: 121 AVAKDGAYLHPKVTTNVLKEYRRLLQFKGEQAGRGVESRTDDPVYQLLSRREVEVLHLLA 180 Query: 169 IGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 G SN +I+ LFISE TVK H+ ++ +K+ V +RTQAV A Sbjct: 181 DGRSNRDISDMLFISEKTVKNHVSSVLRKMDVNDRTQAVVDAIR 224 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 252 bits (644), Expect = 9e-66, Method: Composition-based stats. Identities = 48/213 (22%), Positives = 86/213 (40%), Gaps = 11/213 (5%) Query: 10 GHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS-------GSIILLDM 60 +LL +L + L + L + G+ + +++ + + +LD+ Sbjct: 27 KTRILLADDHALVRRGVRLILDGEPDLWVVGEAGDGAEAIEQVRRRAGTPQEVDLAVLDV 86 Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 + ++ LSR ++IL+L ++ Y G +V Sbjct: 87 AMPRMTGLQAARE-LSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLVQA 145 Query: 121 LQGVLRGECYFTQKLASYLIT-HSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARS 179 + +RGE + S LI + R LT RE+EIL + G S+ EIA + Sbjct: 146 CRAAVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIADT 205 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 LFIS TV+ H N+ K+ +K+R + +A Sbjct: 206 LFISVKTVERHRANILAKLGMKDRLELTRYAIR 238 >UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L0_HERA2 Length = 207 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 9/206 (4%) Query: 11 HTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 +L++ + L+ L +Q G + Q++++ I ++LLD+ Sbjct: 2 IRVLVVDDHPVVRHGLMAMLGWEQDFEPVGDAADGQQAVNLIEQQQPDVVLLDLRLPQLS 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I + T N + L+L T + Y G E V ++ + Sbjct: 62 GIEVMRHT-RASAPNTRFLVLTTYDTDEYIGPALNAGAAGYLLKDASPEEVFRAIRSIYE 120 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 G +A+ ++ L+ RE ++L L G SN IA SL ISENT Sbjct: 121 GGAALQSGIAARVLKRLATEPAE----DELSQRELDVLQLLVRGESNKAIALSLNISENT 176 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWAND 212 +K+H+ ++F K+ V++R +AV+ A Sbjct: 177 IKSHVSHIFSKLDVRSRAEAVAVALQ 202 >UniRef50_B2J8J5 Two component transcriptional regulator, LuxR family n=3 Tax=Cyanobacteria RepID=B2J8J5_NOSP7 Length = 211 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 88/212 (41%), Gaps = 13/212 (6%) Query: 5 VHSIHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDM 60 + + +LL + AL L + + + G + + +L+ + L+D+ Sbjct: 3 MSQSNVIRILLADDHPILGQALTMFLQCESDMTVIGHAGDGREALELFHQHQPDVALMDL 62 Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 + + K + +I++L T + G + +++ Sbjct: 63 RMPKMEGADAIA-AICAKFKHARIVVLTTFDGDEDIYRGLRAGAKGYLLKGAEPNELLDA 121 Query: 121 LQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL 180 ++ V +G+ Y +A+ L + L+ RE E+L + G +N +I+ L Sbjct: 122 IRTVHKGQKYIPPTIAAKLAERMSS--------EELSDRELEVLRLIAKGKNNQQISNVL 173 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 I+E+TV+ H N+F K+ V +RTQA+ A + Sbjct: 174 NIAESTVRFHTNNIFGKLNVSDRTQALVTALN 205 >UniRef50_A7NP18 Two component transcriptional regulator, LuxR family n=12 Tax=Bacteria RepID=A7NP18_ROSCS Length = 222 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 47/210 (22%), Positives = 86/210 (40%), Gaps = 6/210 (2%) Query: 7 SIHGHTLLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDIS--SGSIILLDMME 62 S +LL + L + L++ I G+ + L + I+LLD+ Sbjct: 2 STMPIRILLADDHRMFRQGLRELLERKGGFIIVGEASTGREVLAQAAALRPDIVLLDIQM 61 Query: 63 ADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 + + + L++ + ++K+++L + D + +++ ++ Sbjct: 62 PEIDGVAVARQ-LAQTHPDVKVIMLTMYRQDQHLFEAIKAGARAYLLKDADADELIDVIE 120 Query: 123 GVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFI 182 V RGE + + + + LT RE++IL L G N IA+ LF+ Sbjct: 121 RVHRGEAALDPTVTLRVFDEFRRLSIDQD-AEQLTERERDILTLLAEGHDNRTIAQRLFL 179 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 SE TV L +F+K+ V NRTQA A Sbjct: 180 SEKTVGNRLSEIFQKLGVSNRTQAALVAVQ 209 >UniRef50_C5VAN3 Two component transcriptional regulator, LuxR family n=2 Tax=Corynebacterium matruchotii RepID=C5VAN3_9CORY Length = 215 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 84/211 (39%), Gaps = 6/211 (2%) Query: 9 HGHTLLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSL--DDISSGSIILLDMMEAD 64 + +++ +L L L+ + + G+ + +L ++ +D+ Sbjct: 3 NLIRVVIADDEALIRAGLATILQASGDIEVIGEASTGEEALTVAQRLQPDVVCMDIRMPG 62 Query: 65 KKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGV 124 + + + + ++++ T + Y G+ +V G++ Sbjct: 63 GDGLEATRR-IQQLEPAPAVIVITTFDMDEYVFGALEAGACGILLKDSSMTDLVEGVRRA 121 Query: 125 LRGECYFTQKLASYLITHSGNYRYN-STESALLTHREKEILNKLRIGASNNEIARSLFIS 183 GE L +I + ++ S +LT RE + + +L G SNNEIA +LF+ Sbjct: 122 ALGEGLVDASLTRRVIAEFTRRKSIFTSSSEVLTPRELDCVAQLCQGMSNNEIATTLFLE 181 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 +TVKTHL + K NR Q V WA N Sbjct: 182 PSTVKTHLSSAMAKTGTHNRVQLVIWAFRNG 212 >UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteria RepID=Q8YV43_ANASP Length = 209 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 84/212 (39%), Gaps = 13/212 (6%) Query: 5 VHSIHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDM 60 + +L+ ++ L + + + + N ++ + + L+D+ Sbjct: 1 MSQAITIRVLIADDHAIFRQGLATIINRDPEMQVVAQAENGEQVIALFEEHQPDVTLMDL 60 Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 + + + + + +I++L T + G + + ++N Sbjct: 61 RMPEVEGVAAIS-AICATAKSARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNA 119 Query: 121 LQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL 180 ++ V RG Y + + L+ N L+ RE E+L L G SN +IA +L Sbjct: 120 IRTVHRGHKYIPPDVGAKLVQRLSNP--------ELSERELEVLRSLAQGMSNADIADAL 171 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 I E TVK+H+ + K+ V +RTQAV A Sbjct: 172 SIGEGTVKSHVNRILNKLDVSDRTQAVIVAVK 203 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 87/213 (40%), Gaps = 12/213 (5%) Query: 11 HTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDI--SSGSIILLDMMEA-DK 65 +++ ++ T L ++ + + + + + +++LD+ + Sbjct: 1 MKIVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEHRPDVLILDLSMPPGE 60 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 + +S + KIL+L +D Y G E+++ ++ V Sbjct: 61 SGLIATSK-ISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVRTVY 119 Query: 126 RGECYFTQKLASYLITHSGNYRY------NSTESALLTHREKEILNKLRIGASNNEIARS 179 +GE Y KL + L+ N +S +L+ RE EIL + G N +IA Sbjct: 120 QGETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDIAEK 179 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 LF+S TV+ H ++ K+ +K++ + V +A Sbjct: 180 LFVSVKTVEAHKTHIMTKLNLKSKPELVEYALK 212 >UniRef50_D1BGN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=4 Tax=Actinomycetales RepID=D1BGN7_SANKS Length = 258 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 93/222 (41%), Gaps = 10/222 (4%) Query: 3 NEVHSIHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDI--SSGSIILL 58 + +LL+ L + + + + L + G+ + ++ + S ++L+ Sbjct: 26 ADQPGTPRIRVLLVDDQELFRSGIAVIVDAQDGLEVVGQAADGSEAVRMVDDLSPDVVLM 85 Query: 59 DMMEADKKLIHYWQDTLS-----RKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMED 113 D+ + + + + + +++++L T + +G Sbjct: 86 DVRMPELDGVEATRQIFAPARAASRAGPVRVIVLTTFDLDDRAAAAIRYGASGFLLKDAT 145 Query: 114 QERVVNGLQGVLRGECYFTQK-LASYLITHSGNYRYNSTESALLTHREKEILNKLRIGAS 172 + + ++ V G L++ L R + LT +E+E+L + G + Sbjct: 146 PAMLRDAIRTVHAGNAVLAPDDLSTLLDGRFRARRPSPPGLEDLTPKEREVLAAVAAGLN 205 Query: 173 NNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 N EIAR F+SE+TVKTH+ + +K+ +++R Q V A+++ Sbjct: 206 NAEIARRAFVSESTVKTHVGAVLRKLGLRDRVQVVVLAHEHG 247 >UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR family n=10 Tax=Bacteria RepID=Q1IXN1_DEIGD Length = 221 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 86/217 (39%), Gaps = 9/217 (4%) Query: 2 FNEVHSIHGHTLLLITKSSLQATALLQ--HLKQSLAITGKLHNIQRSLDDISS--GSIIL 57 + +LL+ ++ L L + + G+ N + +L +++ Sbjct: 1 MTDPTPSRPVRVLLVDDHAVVRQGLRLFLSLDSQIEVVGEAANGEEALAAAERLHPDVVI 60 Query: 58 LDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERV 117 +D+M I + L R++ + +++ L + + + G + + Sbjct: 61 MDLMMPVMDGIQATR-LLRRQHPDTEVIALTSTLEEHKVNGAIDAGAMGYMLKDASSDTL 119 Query: 118 VNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIA 177 + + RGE + A L+ LT +E +L + G SN +IA Sbjct: 120 ADAIHAAARGEVRLHPEAARRLVRDFR----TPEMRETLTPKEVIVLQLIARGYSNRDIA 175 Query: 178 RSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 R ++E TVKTH+ L K+ +++RTQA +A + Sbjct: 176 RDQGVTEATVKTHVSRLLGKLGLESRTQAALYALRHG 212 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 249 bits (638), Expect = 4e-65, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 88/213 (41%), Gaps = 9/213 (4%) Query: 8 IHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEA 63 + +LL +L + L + + + G+ N ++ ++L+D+ A Sbjct: 1 MSKTKILLTDDHTLFRQGVRTLLAAEADMEVAGEAANAMDAVALAQQLRPDVVLMDIGMA 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + + ++ +K++ L+ +D Y NG ++++ ++ Sbjct: 61 GMSSFEATR-LIRKERPEVKVIFLSMYDDEDYLAECVDMGANGYILKDSPADQLITAIRE 119 Query: 124 VLRGECYFTQKLASYLITHS----GNYRYNSTESALLTHREKEILNKLRIGASNNEIARS 179 V RG Y + +L S L+ S LT RE+EIL L G S EIA Sbjct: 120 VQRGGSYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIAAF 179 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 +S TV+ H +NL +K+ + N+ Q V +A Sbjct: 180 FELSVKTVEAHKFNLMRKLDIHNKAQLVQYAIQ 212 >UniRef50_B1ZY58 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZY58_OPITP Length = 223 Score = 249 bits (637), Expect = 5e-65, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 87/212 (41%), Gaps = 13/212 (6%) Query: 7 SIHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDI--SSGSIILLDMME 62 S +L++ L+ + + + + + + + +++ ++L+D+ Sbjct: 16 SGATIRVLVVDDHPPMRVGLVALIRSQPGMDVVAEASDGEEAIEIYDDLQPDVVLMDLRM 75 Query: 63 ADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 + + +K ++++L+T + E + + ++ Sbjct: 76 PGMGGVEAIL-AIRKKAPEARVIVLSTYDWDEDIHRALQSGAKSYLLKDMPIEEIASTVR 134 Query: 123 GVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFI 182 V G+ + +A L + LT RE+++L L G SN EIA SL I Sbjct: 135 AVYAGDTSLPRSVAERLTERAQR--------EQLTERERDVLESLIKGRSNKEIASSLCI 186 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 SE+TVK+HL LF K+ V++RT A A + Sbjct: 187 SEDTVKSHLKTLFAKLRVRDRTGAAIEAIRHG 218 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 248 bits (636), Expect = 6e-65, Method: Composition-based stats. Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 8/207 (3%) Query: 11 HTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 + L+ L +L ++ + I G N ++++ +I+ + ++D+ Sbjct: 2 IQVYLVDDHPFVLQGLKAYLNTREGIEIVGTSGNGEKAIKEIAKLNPEVAVVDLRLPGLN 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I ++ + +KN ++++L++ E++V ++ R Sbjct: 62 GIEVTRE-IKKKNPGTEVIILSSFNKEDEVIEAIDAGALSYVMKDSRPEKLVEAIKAARR 120 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 GE T +A ++ + + LT REKE+L L G SN +IA++L ISE T Sbjct: 121 GEPVLTPGVAKKIMKRAARKGRKTEP---LTPREKEVLACLVRGNSNRDIAKTLCISETT 177 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDN 213 VKTH+ N+ KK+ VK+RTQAV A +N Sbjct: 178 VKTHVSNILKKLDVKDRTQAVIKAIEN 204 >UniRef50_B8FX94 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FX94_DESHD Length = 212 Score = 248 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 48/206 (23%), Positives = 95/206 (46%), Gaps = 6/206 (2%) Query: 11 HTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRS--LDDISSGSIILLDMMEADKK 66 +++ L L + L+ + + + ++ + Q + + I+L+D+ Sbjct: 2 IRVVIADDHPLLREGLRRILEFEEGIQVVCEVGDGQGAINVSRTLDFDILLMDLNMPGVN 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + + + R+N I IL+L + + G D + +++ ++ V Sbjct: 62 GLEACR-VIRRENETIGILVLTVDDSDEKVFQVLQLGVAGYLLKDVDPKTLIDSIRKVHS 120 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 G+ + + L+ + N + L+ RE +IL + G+SN EI ++LFISE T Sbjct: 121 GQPILSPAVTGKLLGQLVHPTQNRD-TCGLSDRELQILTYVVKGSSNREIGQALFISEKT 179 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWAND 212 VK HL ++F+K+AV++RTQA A Sbjct: 180 VKNHLSSIFRKLAVEDRTQAALKAVK 205 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 248 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 10/214 (4%) Query: 10 GHTLLLITKSSLQATALLQHLKQ--SLAITGKLHN--IQRSLDDISSGSIILLDMME-AD 64 ++L+ +L L L++ + + G+ + +L + S ++++D+ A Sbjct: 2 AIRVMLVDDHALVREGLRALLEREGDIEVVGETGSAAGVLALAEESRPEVVVMDLQLGAG 61 Query: 65 KKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGV 124 + + ++ L K IK+++L+ +D G E + ++ V Sbjct: 62 RNGVEATRE-LVEKKPEIKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIRLV 120 Query: 125 LRGECYFTQKLASYLITHSGNY----RYNSTESALLTHREKEILNKLRIGASNNEIARSL 180 RGE Y ++A +I R + E LT RE E+L G +N EIAR L Sbjct: 121 ARGEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIARRL 180 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 IS TV+ H N+ +K+ + +R V +A N Sbjct: 181 VISVKTVQAHRANIMQKLGLHDRVDLVKYAIKNG 214 >UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridium RepID=C5RGJ7_CLOCL Length = 220 Score = 248 bits (635), Expect = 9e-65, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 85/213 (39%), Gaps = 15/213 (7%) Query: 11 HTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 +++ + + L + + G+ N + ++ + + +IL+D+ Sbjct: 2 INVIIADDQKIVREGIKMILSLYDEINVIGEAENGEELINLLQNFMADVILMDVRMPIID 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + + + + + K+++L T + Y +G E ++N ++ V Sbjct: 62 GVEATK-IIKERYIHTKVIILTTFNEDEYIFKAIKNGADGYLLKDVGSEFIINAIRSVYN 120 Query: 127 GECYFTQKLASYLITHSGNYRYNS----------TESALLTHREKEILNKLRIGASNNEI 176 G ++ ++ + S + LT RE ++ + G SN +I Sbjct: 121 GAMLLDPEVTVKVVKAFNSITNESKNSNEFDNINNKLNSLTPREIDVAKLVAQGKSNKDI 180 Query: 177 ARSLFISENTVKTHLYNLFKKIAVKNRTQAVSW 209 RSLF++E TVK ++ + K+ + +RT+ + Sbjct: 181 CRSLFLTEGTVKNYVTRILGKLELNSRTELAVF 213 >UniRef50_D1CI66 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1CI66_THET1 Length = 218 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 6/209 (2%) Query: 11 HTLLLITKSSLQATALLQHLKQ-SLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 +L+ +L +L L+ + + G+ + +++ ++L+D+ Sbjct: 1 MRVLIADDHALFRDSLRTLLEARGVEVVGEAETGKEAVELARELRPDVVLMDLKMPGMDG 60 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + +S + +K+++L ED G + ++ L+ RG Sbjct: 61 LAATR-MISAEMPEVKVVVLTASEDDEDLFEAVKSGALGYMFKDVRSDQFFELLEAASRG 119 Query: 128 ECYFTQKLASYLITHSGNYR-YNSTESALLTHREKEILNKLRIGA-SNNEIARSLFISEN 185 E FT LA L+ E +LT RE+EIL L G SN E+A L +SEN Sbjct: 120 EPAFTPGLARKLLREMSKPAGRAEREPEVLTEREQEILELLVQGVTSNKELAERLILSEN 179 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 TVK HL N+ K+ ++NRTQ V++A + Sbjct: 180 TVKYHLRNILDKLHLQNRTQVVAYALQHG 208 >UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V5Y3_9FIRM Length = 223 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 49/217 (22%), Positives = 90/217 (41%), Gaps = 14/217 (6%) Query: 10 GHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLD--DISSGSIILLDMMEADK 65 +LL +L + + L + L + G+ + Q +L + I+LLD+ Sbjct: 2 AIRILLADDHALLRQGIKRVLNFEDDLEVVGEAEDGQEALARTLMLKPDILLLDINMPGL 61 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 + + L + + +KI+ L + Y G + ++ + V Sbjct: 62 TGLDVAKQ-LKQARSRVKIIALTIHDSDNYVLELLKNGALGYLLKDVEPNVLIKAIHMVN 120 Query: 126 RGECYFTQKLASYL---------ITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEI 176 G + KLA L + ++ + LT RE ++L + G SN +I Sbjct: 121 EGNPFVYPKLAERLFGTSSISGDVGRMAKEIWDESRGERLTPREMDVLGCIAKGLSNQDI 180 Query: 177 ARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 ++L +SE TVK HL ++F K+ V +RTQA+ + N Sbjct: 181 GKALGLSEKTVKNHLTSVFHKLKVNDRTQALVYVLKN 217 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 94/219 (42%), Gaps = 12/219 (5%) Query: 5 VHSIH----GHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSII 56 +H + L+++ L L+ + G+ + + +++ ++ Sbjct: 1 MHGMSGAGGPVRLIVVDDHDLIRAGFRLVLEQEPDFEVVGEASSGREAIELCRRLRPDVV 60 Query: 57 LLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQER 116 ++D+ + + + ++ + +L++ ED Y G R Sbjct: 61 VMDLAMPGVDGLEATRR-IKEEHPQVAVLVVTALEDPEYMLEALKAGAAGYVLKSSPLPR 119 Query: 117 VVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTES---ALLTHREKEILNKLRIGASN 173 V++ L+ +L GE Q+LA+ LI LT RE+E+L + G +N Sbjct: 120 VISALRRLLSGESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTN 179 Query: 174 NEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 EIAR L IS T K+H+ N+ +K+ V +RTQAV+ A + Sbjct: 180 PEIARELVISRGTAKSHVQNIIRKLGVSDRTQAVARAFE 218 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 9 HGHTLLLITKSSLQATALL--QHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEAD 64 +L+ + L L++ + + G+ + + + +ILLD++ Sbjct: 6 EVIRVLIADDHRMVRQGLRTFLELQEGIEVAGEAADGAECAERAAELEPDVILLDLVMPG 65 Query: 65 KKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGV 124 + + L + ++L++ + D G Y D + ++ V Sbjct: 66 VDGVGAM-ELLREAGSTARVLVVTSFTDRRMIIPAIRAGARGYVYKDVDPAALAAAVRSV 124 Query: 125 LRGECYFTQKLASYLITHSGNYRYNSTESAL-LTHREKEILNKLRIGASNNEIARSLFIS 183 G ++A+ L+ N + A LT RE+E+L + G +N EIAR+L ++ Sbjct: 125 HAGHVLLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIARALVLA 184 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 E TVKTH+ N+ K+ V +RTQA WA + Sbjct: 185 EKTVKTHVSNILMKLGVADRTQAALWAVRHG 215 >UniRef50_C4DCK3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=3 Tax=Actinomycetales RepID=C4DCK3_9ACTO Length = 214 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 39/208 (18%), Positives = 79/208 (37%), Gaps = 7/208 (3%) Query: 11 HTLLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 +LL+ L L + + + G+ Q ++ ++L+D+ Sbjct: 2 IRVLLVDDQRLIRAGLRMLCEPAADIEVVGEADGGQAAVRLAGELCPDLVLMDLRMPGMD 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I Q L+ + + +++ L T +D + G ++ ++ Sbjct: 62 GITATQRILAER-PSTRVVALTTFDDDDHLYPALAAGACGFLVKDTSPNELLEAIRKAAD 120 Query: 127 GECYFTQKLASYLITHSGNYRY--NSTESALLTHREKEILNKLRIGASNNEIARSLFISE 184 G+ F+ + ++ + R + LT RE+E+L + G +N +IA L + Sbjct: 121 GDTPFSAGVVKRIVDSAVRARASVPTATLPKLTTREREVLALVGAGYANVDIAERLHLGV 180 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWAND 212 TVKTH+ +L K NR + A Sbjct: 181 TTVKTHIASLMTKTGCSNRVRLAVLAVR 208 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 247 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 47/214 (21%), Positives = 88/214 (41%), Gaps = 7/214 (3%) Query: 5 VHSIHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISSG--SIILLDM 60 S +L++ L L L + + + G+ N +LD ++ ++++D+ Sbjct: 8 GSSSPSTRVLIVDDHELARAGLAAVLACEPGIEVVGEADNGAAALDFVARHPVDLVMMDL 67 Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 I + + + I I+++ + G + ++ Sbjct: 68 QMPVIDGIEATRR-IKALHPAIGIIMVTVQAKPDALMEALRAGVAGYLLKDASRREIIGA 126 Query: 121 LQGVLRGECYFTQKLASYLITHSG--NYRYNSTESALLTHREKEILNKLRIGASNNEIAR 178 ++ VLRGE + L + ++T LT RE+++L L G +N EIAR Sbjct: 127 VRQVLRGEAFLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNREIAR 186 Query: 179 SLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 L IS TVK H+ ++ K+ V +RTQA A + Sbjct: 187 ELIISPGTVKVHVEHIIAKLGVSDRTQAAVRALE 220 >UniRef50_A6TVR4 Two component transcriptional regulator, LuxR family n=5 Tax=Firmicutes RepID=A6TVR4_ALKMQ Length = 208 Score = 247 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 91/208 (43%), Gaps = 5/208 (2%) Query: 11 HTLLLITKSSLQATALLQH--LKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 +L++ +L +L L+ + G N Q + + +IL+D+ Sbjct: 1 MKVLIVDDDALIRDSLKILIDLEADFTVVGTASNGQEAFEFCKEYAPDLILMDIRMPIMD 60 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + + + +I+I++L T +D Y G + + ++ L+ V + Sbjct: 61 GVLATK-MIKESFGSIRIIILTTFKDDQYIKEALKNGAQGYILKSQSADSIIESLRTVSK 119 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 G F ++AS L + + LT RE EI+ + G SN EI+ +L++SE T Sbjct: 120 GNVVFETEIASVLTSMLKEEKEKHHLDLQLTEREHEIIKWVGEGLSNREISAALYLSEGT 179 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDNL 214 V+ ++ L +K+ V++RTQ + + Sbjct: 180 VRNYVTQLLEKLNVRDRTQLAIFYLKYI 207 >UniRef50_A5URU4 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexi (class) RepID=A5URU4_ROSS1 Length = 242 Score = 247 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 86/219 (39%), Gaps = 16/219 (7%) Query: 9 HGHTLLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDISS--GSIILLDMMEAD 64 +L+I L + L++ + + G+ N Q ++ ++L+D+ Sbjct: 3 QRIRVLIIDDHPLFRQGIRWSLEEAGDMEVVGEAENGQEAIKLAERLVPDVVLVDINLPG 62 Query: 65 KKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGV 124 + + + R+ I +++++ ED +V ++ V Sbjct: 63 LNGLEVAR-VIKRREPRIGLIVISVYEDDDQLFQAIKVGAAAYSSKDVHPRDLVRMIREV 121 Query: 125 LRGECYFT------QKLASYLITHSGNYRYNSTE-----SALLTHREKEILNKLRIGASN 173 RG+ +A+ ++ E A LT RE EIL+ + G SN Sbjct: 122 ARGKYLINDSVIAKPHVATRVLHQFRELAATEDERTSALFAPLTSREIEILDCIARGLSN 181 Query: 174 NEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 EIA L IS TVK H+ ++ K+ V +RT AV +A Sbjct: 182 KEIASQLSISGQTVKNHITSILSKLQVNDRTMAVIYAIQ 220 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 247 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 89/211 (42%), Gaps = 5/211 (2%) Query: 8 IHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEA 63 + +L++ +L + L L ++ + + G+ + + ++LLD+ Sbjct: 1 MKKIKVLIVDDHTLMRSGLRLMLSAQEDIEVVGEAADGSGGIAMAQKMRPDVVLLDISMP 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + + + L+ + +++++LL ED Y G + + ++ Sbjct: 61 EMSGLECLKTLLANQ-PDLRVILLTMHEDARYVKEGFALGAMGYVLKKAADDVLYQAVRA 119 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 V GE Y + ++ L+ +EK++L+ + G +N EIA L IS Sbjct: 120 VYSGEMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQLVIS 179 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 TV+T+ Y + +K+ K R+ V +A DN Sbjct: 180 VKTVETYKYRIMEKLNCKKRSDLVKFALDNG 210 >UniRef50_D1BXU0 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D1BXU0_XYLCX Length = 223 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 16/216 (7%) Query: 11 HTLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKK 66 +L+ L L L +L+ L + G+ + +L I LD+ Sbjct: 2 IRVLIADDQPLVRAGLTALVNLEPDLEVVGEAGDGVTALAMAQDLRPDIACLDIRMPGLD 61 Query: 67 LIHYWQDTLSRKNNNI----KILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 I + ++ +L+L T + Y ++G + E + ++ Sbjct: 62 GIAVARRLC---GPDVEAPIPVLVLTTFDLDDYVFGALEAGVSGFLLKDAEPETITTAIR 118 Query: 123 GVLRGECYFTQKLASYLITHSGNYRY-----NSTESALLTHREKEILNKLRIGASNNEIA 177 V G Q L ++ R S + +LT RE+EIL L G SN+EIA Sbjct: 119 QVAAGNGTIDQTLTRRILREFVQRRSLQPVSTSRGNGVLTSREQEILLLLAQGMSNDEIA 178 Query: 178 RSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 R+L + +TVK+HL + K+ V++R QAV WA N Sbjct: 179 RTLVVELSTVKSHLARMLPKLGVRSRLQAVVWAYQN 214 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 85/212 (40%), Gaps = 8/212 (3%) Query: 5 VHSIHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDM 60 + + +LL + + + + + + G+ + +++ ++++D+ Sbjct: 1 MQTTQMIKVLLADDHVIVREGTRELIQRESGMMVVGEASDGVEAVEMSMKVHPDVVVMDI 60 Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 I + + + IL+L E Y +++ Sbjct: 61 AMPRLNGIEATKQ-IKQLLPTTAILILTAYESEQYILAILEAGAASFLLKNVKGTQLLEA 119 Query: 121 LQGVLRGECYFTQKLASYLITHSGNYRYNSTESA---LLTHREKEILNKLRIGASNNEIA 177 ++ V GE +I N + E + LT RE E+L G SN +IA Sbjct: 120 IRAVYAGESVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGVSNKDIA 179 Query: 178 RSLFISENTVKTHLYNLFKKIAVKNRTQAVSW 209 L++S T++THL N+FKK++V +RT+A+ + Sbjct: 180 DQLYLSNRTIQTHLSNIFKKLSVGSRTEAILY 211 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 87/212 (41%), Gaps = 8/212 (3%) Query: 8 IHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEA 63 +LL+ ++ L L + L + G++ + + +++ ++++D+ Sbjct: 2 TQTVRVLLVEDHTIVREGLKALLTATEDLEVVGEVADGRAAVEAAERLAPDVVVMDINMP 61 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + ++ + K N ++L+L+ + Y +G +V ++ Sbjct: 62 KLDGVGATRE-IREKVNAPRVLILSMYDGEEYVRPAIRAGASGYLLKGSGLSDLVTAIRE 120 Query: 124 VLRGECYFTQKLASYLITHSGNYR---YNSTESALLTHREKEILNKLRIGASNNEIARSL 180 V G +F+ +A L+ S R + LT RE+E+L + G S+ EIA+ L Sbjct: 121 VAGGNAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAKIL 180 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 +S T++ H + K+ V N V A Sbjct: 181 GLSVKTIEGHRGRIMAKLGVHNVAGLVRQAIR 212 >UniRef50_A9AZR3 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZR3_HERA2 Length = 213 Score = 247 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 89/211 (42%), Gaps = 8/211 (3%) Query: 8 IHGHTLLLITKSSLQATALLQHLKQSLA--ITGKLHNIQRSLDDIS--SGSIILLDMMEA 63 + ++L+ ++ L L + I G+ N +++ + +IL+D++ Sbjct: 2 TNIIRIMLVDDHAIVREGLRTLLAEDTEFLIVGEAQNGADAIELAAVVRPHVILMDLVMP 61 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + I L + +I++L + D + +G + + ++ Sbjct: 62 NVDGIQAT-QALQSLMPSSRIIVLTSFSDDQWVSKAIQAGASGYLLKNVLKAELFLAIRT 120 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 V G+ + + L + LT RE+ +L+ + G SN EIARSL ++ Sbjct: 121 VANGQPFLHAEAQRTL---MRQSTAPPSLLPSLTERERSVLDGIVGGLSNKEIARSLHLT 177 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 E TVK ++ + K+AV +RTQA +A + Sbjct: 178 EGTVKGYVSTILTKLAVADRTQAALYAIKHG 208 >UniRef50_P94439 Uncharacterized transcriptional regulatory protein yfiK n=4 Tax=Bacillales RepID=YFIK_BACSU Length = 220 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 88/216 (40%), Gaps = 13/216 (6%) Query: 11 HTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 +++ + L L+ + L + N Q + + I+L+D+ Sbjct: 2 IKIIITDDQDIVREGLASLLQLREELDVIATARNGQEAFEKAKELEPDIVLMDIRMPVSN 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + + ++ ++K+L+L T +D +G + +V + V Sbjct: 62 GVEGTK-LITSSLPSVKVLMLTTFKDSALIAEALEEGASGYLLKDMSADTIVKAVMTVHS 120 Query: 127 GECYFTQKLASYLITHSGNYRY--------NSTESALLTHREKEILNKLRIGASNNEIAR 178 G +L + ++ + E LT RE E+L +L G +N EIA Sbjct: 121 GGMVLPPELTAQMLNEWKREKQLKGINEIEKPNELLDLTEREIEVLAELGYGLNNKEIAE 180 Query: 179 SLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 L+I+E TVK H+ N+ K+AV++RTQA ++ Sbjct: 181 KLYITEGTVKNHVSNIISKLAVRDRTQAAIYSVRYG 216 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 246 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 83/209 (39%), Gaps = 7/209 (3%) Query: 10 GHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADK 65 ++++ + + L+ + + N +L+ + ++L+D+ Sbjct: 8 PIRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPIM 67 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 I + + + + K+L+L ++ Y G ++V ++ V Sbjct: 68 NGIEATR-LIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVH 126 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 +G YF + S L + + + L+ RE+ IL + G S+ +IA L IS Sbjct: 127 QGATYFCESTTSTLFSQ--EILPVANKPNPLSRREEAILRMVAQGCSSKKIATLLNISYR 184 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 TV+TH N+ K+ + + + +A + Sbjct: 185 TVETHRQNIKHKLDIHSTAELAQYALQHG 213 >UniRef50_UPI0001789C57 two component transcriptional regulator, LuxR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C57 Length = 225 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 91/221 (41%), Gaps = 14/221 (6%) Query: 5 VHSIHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDM 60 + + ++L L L ++ + + G+ + ++D I+L+D+ Sbjct: 1 MQTEKMIRIVLADDQPFIRKGLRYILDIQKDMQVIGEAMTGEEAVDITLRNVPDIVLMDI 60 Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 I + +++ N K++LL T + Y +G + + +++G Sbjct: 61 RMPGGTGIMATK-SIAEALPNTKVVLLTTFDVEQYVFDGIRAGASGYLLKDTETDELLSG 119 Query: 121 LQGVLRGECYFTQKLASYLITHSGNYRYNSTESA---------LLTHREKEILNKLRIGA 171 ++ + RG F A + +S LT RE E+L L G Sbjct: 120 IRAMHRGATLFNSSTAKRALDQILTSGMQEPDSDSPGKDRLLGALTERETEVLQLLAYGK 179 Query: 172 SNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 N+EI+ L ISE T KTH++++ +K+ +RTQAV A Sbjct: 180 RNHEISAILCISEGTTKTHIHHIMQKLGALDRTQAVVTAIR 220 >UniRef50_C1TL62 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL62_9BACT Length = 217 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 5/209 (2%) Query: 8 IHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEA 63 + ++LI L + + L+ ++ G+ + L I ++LLD+ Sbjct: 1 MEKIRMVLIDDHKLFRDGMKKLLEMEPDFSLEGEASDGIEGLALIKRSRPDVVLLDIGMP 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + I ++ L N K + + D + ++G + +++ ++ Sbjct: 61 NLDGIGLIRE-LRSTEQNTKFVAITAFNDERKLSELSSVGVHGFVLKSSGRTELLSAIRS 119 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 V RG+CY K+A L+ + + LT REKE+L L G SN EI+ + +S Sbjct: 120 VARGQCYVDPKVAGLLLGAFHKKQDEADMLCDLTDREKEVLFWLAQGLSNLEISAKMNLS 179 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 E TVK H+ ++ KK+ +++RTQA A Sbjct: 180 EKTVKNHVSHILKKLDLRDRTQAAILAWR 208 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 46/209 (22%), Positives = 87/209 (41%), Gaps = 8/209 (3%) Query: 8 IHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEA 63 + +L+ ++ + + L ++ + + G+ + Q ++D ++ ++L+D++ Sbjct: 1 MAKTKVLIADDHAVLREGMSRLLSQEKDIEVVGEAGDGQEAVDMVAQFKPDVVLMDIVMP 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + + + + N + IL+L D Y +G + +V ++ Sbjct: 61 RLTGVEATK-LIKKNNPSTCILILTAYSDIRYILGLLEAGASGYLLKSAKSDEIVGAIRA 119 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTES---ALLTHREKEILNKLRIGASNNEIARSL 180 + GE L+ N S E L+ RE EIL G SN EIA L Sbjct: 120 IKAGESVLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREIADKL 179 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSW 209 +S TVK HL N+F K+ RT+A+ Sbjct: 180 TLSMRTVKAHLSNIFNKMRCSCRTEAIVK 208 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 245 bits (628), Expect = 5e-64, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 88/209 (42%), Gaps = 11/209 (5%) Query: 10 GHTLLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDISS--GSIILLDMMEADK 65 +L++ + A + L+ + + G + + + ++ + +IL+D+ D Sbjct: 23 PIRVLIVDDHPMVAEGIQSILESYGDIEVVGAVSSGREAIARAEALVPDVILMDLNMPDV 82 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 + + + + I++L+L+ + Y G E + + V+ Sbjct: 83 GGLSAT-EIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTAIDAVM 141 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 RGE Y A L + T LT RE+ IL +L G SN E+A++L IS Sbjct: 142 RGEQYLCTGAAGSL------SPQSQTSREALTGREQTILLELAQGKSNKEVAQALDISVR 195 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 TV+TH N+ +K+ + + +A ++ Sbjct: 196 TVETHRKNIKRKLGISSTAGLTRYALEHG 224 >UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacillaceae RepID=Q5WI37_BACSK Length = 210 Score = 245 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 94/207 (45%), Gaps = 5/207 (2%) Query: 11 HTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISSG--SIILLDMMEADKK 66 +LL + L ++ + + +TG+ + +++L + + +LD+ + Sbjct: 2 IKVLLAEDQVMVRQGLKAMIETDEDIKVTGEADDGRKALRLCETHVFDVAILDIRMPEMD 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I + + + +KIL+L T +D+ Y +NG D E ++ ++ + Sbjct: 62 GIEAAK-MMRLRYPKMKILMLTTFDDHQYVVESLKLGVNGYMLKNGDTESLIRSIKSTIN 120 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 G ++A+ ++ + + LT RE+ IL + G +N EIA L +S T Sbjct: 121 GGLSLEDQVAAKVVPTLLQNQEEPSIDPSLTPRERAILTCIGEGLNNKEIAERLGLSVGT 180 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDN 213 VK ++F K+A+++RTQ +A + Sbjct: 181 VKNQTSHIFDKLALRDRTQLAIYAIRH 207 >UniRef50_C0Z4M7 Two-component response regulator n=7 Tax=Bacillales RepID=C0Z4M7_BREBN Length = 235 Score = 245 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 47/231 (20%), Positives = 107/231 (46%), Gaps = 21/231 (9%) Query: 2 FNEVHSIHGHTLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIIL 57 + ++L+ ++ L + +++ + ++G+ N + ++ + ++L Sbjct: 1 MENQNKKETIRVVLVDDQTMIRQGLGYVIKMQKDMEVSGEASNGEEAVKIVGEIIPDVVL 60 Query: 58 LDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERV 117 +D+ + I ++ ++R + ++K+L+L T + Y Y G D + + Sbjct: 61 MDVQMPNMSGIDATRE-ITRLHPSVKVLILTTFDTYDYIVDGIRAGAVGYMLKDSDSQDM 119 Query: 118 VNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESA----------------LLTHREK 161 ++ ++ +GE F A+ + ++ + E LT RE+ Sbjct: 120 LDLIRRAHQGEALFYTATAAKALAEVLQFQQKNYEPDSDADCDSTLPPLVMFDQLTDRER 179 Query: 162 EILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 ++L +L G N++IA+ L IS TVKTH++ + +K+ V++RTQAV+ A Sbjct: 180 DVLEQLSYGKRNDQIAQHLLISGGTVKTHIHRILQKMGVEDRTQAVAKAIR 230 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 245 bits (627), Expect = 7e-64, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 83/212 (39%), Gaps = 8/212 (3%) Query: 8 IHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEA 63 + +LL ++ L L+ + G + + ++ ++++D+ Sbjct: 1 MKTIRILLADDHTVVRKGLRLLLESHPGFQVIGDAADGRDAVSLAGEHTPDVVVMDVAMP 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 I + +S K + I+ L+ D Y + ++ + Sbjct: 61 GLNGIEAARQ-ISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAVIA 119 Query: 124 VLRGECYFTQKLASYLITHSGNY---RYNSTESALLTHREKEILNKLRIGASNNEIARSL 180 V G+ +F+ ++ L+ R LLT RE+E+L L G +N E+A L Sbjct: 120 VSEGKAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAAIL 179 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 +S TV+TH N+ +K+ + + + + +A Sbjct: 180 NLSLYTVETHRGNILQKLNLHSGAELILYAIR 211 >UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmicutes RepID=VRAR_STAA1 Length = 209 Score = 245 bits (627), Expect = 7e-64, Method: Composition-based stats. Identities = 44/207 (21%), Positives = 91/207 (43%), Gaps = 8/207 (3%) Query: 11 HTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKK 66 +L + + + +L + + + G+ + + ++ +IL+D++ D Sbjct: 3 IKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDMD 62 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + + + IK+L+L + + ++ + + + ++ R Sbjct: 63 GVEATTQ-IKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTSR 121 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 GE F ++ L+ + + +LT RE EIL + G SN EIA + I+ T Sbjct: 122 GESVFEPEV---LVKMRNRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIKT 178 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDN 213 VKTH+ N+ K+ V++RTQAV +A + Sbjct: 179 VKTHVSNILSKLEVQDRTQAVIYAFQH 205 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 245 bits (627), Expect = 8e-64, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 84/209 (40%), Gaps = 6/209 (2%) Query: 11 HTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKK 66 +LL + + L ++ + + + N + +L + ++D+M Sbjct: 3 IKILLADDHKILREGVKALLNRQEDMEVVAEAGNGEEALSIAGEIRPDVTVMDVMMPQMD 62 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I + + ++ + +++ L+ D + G +V ++ V+ Sbjct: 63 GIEATRRIV--EDGSSRVVALSMYADRSFVSEMLKVGALGFLLKDCASTELVEAVRKVMD 120 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 GE Y ++ + + ++ + LT REKEIL L G +N E+A L +S T Sbjct: 121 GEIYLGPSISHIVAKLYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHLSIKT 180 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDNLR 215 V TH ++ K+ +KN V +A N Sbjct: 181 VGTHRQHIMNKLKLKNLADLVKYAIRNGM 209 >UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MN84_CRYCD Length = 215 Score = 245 bits (627), Expect = 8e-64, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 82/210 (39%), Gaps = 9/210 (4%) Query: 13 LLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDISS--GSIILLDMMEA-DKKL 67 + + ++ + + + G+ + + + D ++ ++LLD+ + Sbjct: 4 VAIADDHAVVRQGFAFIINSQCDMRVVGEAADGKEAYDLVARVEPHVLLLDISMPPGENG 63 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + +S + +I++L E+ Y G E ++ ++ V G Sbjct: 64 LIACER-ISCDFPSTRIIILTMFEETDYLFYTLRGGAAGYVLKNSSTEVLLGAIRKVATG 122 Query: 128 ECYFTQKLASYLITHSGNYR--YNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 E Y +A L L+ RE EI + L G +N E A LFIS Sbjct: 123 ETYIEPNMAQALSGKLHGQSGVAEKNPYHELSSREFEIFSLLAQGYTNKEAADKLFISVK 182 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWAND-NL 214 TV+TH ++ K+ V +R + V A +L Sbjct: 183 TVETHRSKIYAKLGVNSRAELVHLALKYHL 212 >UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomycetales RepID=A4XCA4_SALTO Length = 235 Score = 245 bits (626), Expect = 9e-64, Method: Composition-based stats. Identities = 42/208 (20%), Positives = 85/208 (40%), Gaps = 9/208 (4%) Query: 13 LLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKLI 68 +L++ L +AL + + I G+ + ++ ++L+D+ I Sbjct: 5 VLVVDDQPLVRSALRMVVAEVDDMVIAGEAETGEEAVRLTRELKPDVVLMDLRMPGMGGI 64 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 + + ++L+L T ++ + G + +++ ++ V G Sbjct: 65 EATGQIVR-LSPETRVLVLTTFDEDDHVFGALQAGAAGFLIKNMSLDDILDAVRTVAHGN 123 Query: 129 CYFTQKLASYLITHSGNYRYNST----ESALLTHREKEILNKLRIGASNNEIARSLFISE 184 + LI H + R T + +T RE+E+L + G SN+EIA L +S Sbjct: 124 GLLAPSVTRRLIKHVVDTRTAPTVPRRPLSGITEREREVLTLVGRGLSNSEIADELRLSH 183 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWAND 212 TVKT++ L K+ ++R V A + Sbjct: 184 ATVKTYITRLLSKLGARDRVHLVIAAYE 211 >UniRef50_UPI00018507A5 two component LuxR family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018507A5 Length = 212 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 44/207 (21%), Positives = 87/207 (42%), Gaps = 10/207 (4%) Query: 8 IHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDI--SSGSIILLDMMEA 63 + +L+ L + L + + + + ++ ++L+D+ Sbjct: 1 MKSIRVLIADDHPLFRQGVSSVLANTPDNEVIAEAGSGEEAVQMACNLLPDLVLMDIQMP 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 D I + LS+ +I I+++ ED G ++E ++ ++ Sbjct: 61 DLNGIEATRKILSK-CRDIYIIIITMFEDDTSVFSAMQAGARGYVLKDAEKEDILRAVRA 119 Query: 124 VLRGECYFTQKLASYLITHSGNYR-----YNSTESALLTHREKEILNKLRIGASNNEIAR 178 + +GE F+ +AS +I + ST LT RE E+L L GASN+E+A Sbjct: 120 IAKGEVLFSSGVASRMIDYFAQGEVTQTVVASTLFPELTSRESEVLFLLSKGASNSEVAE 179 Query: 179 SLFISENTVKTHLYNLFKKIAVKNRTQ 205 +L +S TV ++ N+ K+ V +R + Sbjct: 180 TLGLSNKTVYNYVANILNKLQVSDRQE 206 >UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD7_9MICO Length = 207 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 9/208 (4%) Query: 11 HTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISSG--SIILLDMMEADKK 66 + L+ L + L+ L++ G+ + Q ++ I + ++L+D+ Sbjct: 2 IRVYLVDDHQLVRAGVRTLLESDPGLSVVGEARDGQEAVAGIDAAASDVVLMDLSMPVMD 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + + LS + + ++L+L + D G + ++ + R Sbjct: 62 GVEATRAILS-THPDTRVLVLTSFSDRERVKEVLAAGAIGYVLKDAEPADLLAAVHAAAR 120 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 GE ++A L+ +G L+ RE ++L + G +N ++AR+L I+E T Sbjct: 121 GEVPIDPRVAGALLPSAGGPSVA----DRLSPRETQVLRLVAQGLANKQVARALGITERT 176 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDNL 214 VK HL +F++I V +RT A WA D+L Sbjct: 177 VKAHLGRVFREIGVLDRTSAALWARDHL 204 >UniRef50_D1B9T1 Two component transcriptional regulator, LuxR family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9T1_THEAS Length = 227 Score = 244 bits (624), Expect = 1e-63, Method: Composition-based stats. Identities = 46/209 (22%), Positives = 93/209 (44%), Gaps = 5/209 (2%) Query: 8 IHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDI--SSGSIILLDMMEA 63 + ++L L L + L+ + + + G+ + +++ + ++L D+ Sbjct: 1 MRKIRIVLADDHRLFRDGLRRLLEMEKDMEVIGEAEDGDATVEMVSALKPDVLLFDIHMP 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 K I +D L + + + + +D + + I+ +++ ++ Sbjct: 61 KKDGIQVVKD-LKAMGCSPRFVAITAFDDDDHITALSSVGIDAYVLKASGMAELLSAIRS 119 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 V RG Y K+A L++ R + LT RE E+L + G +N EIAR + +S Sbjct: 120 VYRGHSYVDPKVAGKLLSTFNRRREERDLLSRLTPREMEVLYWISQGLNNGEIARKMVLS 179 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 E TVK H+ ++ KK+ + +RTQA +A Sbjct: 180 EKTVKNHVSHILKKLDLVDRTQAAVFAWK 208 >UniRef50_C7MRK0 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MRK0_SACVD Length = 226 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 46/222 (20%), Positives = 93/222 (41%), Gaps = 14/222 (6%) Query: 1 MFNEVHSIHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS------ 52 M + ++++ ++ L +L+ L + + + Q ++D ++ Sbjct: 1 MAERSTAPETVRVMVVDDHAIVRRGLRAYLETVPDLRLVSEAADGQEAVDLLNERHVVGD 60 Query: 53 --GSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYS 110 ++L+D+ I + L+ ++K+++L + + G Sbjct: 61 PMPHVVLMDLQMPRLDGIEATRSILAS-YPDVKVVVLTSFSEAERVHAALSAGAAGYVLK 119 Query: 111 MEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIG 170 + E V ++ ++GE + +A L + + T LT RE++IL + G Sbjct: 120 DAEPEEVATAVRAAVKGEVHLDAAVARLLARRMASPQVGVTS---LTARERDILVLVGQG 176 Query: 171 ASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 SN EIA L ISE T +TH+ N+ K+ + +RTQA A Sbjct: 177 LSNREIADRLVISERTARTHVSNVLSKLQLSSRTQAALLAIR 218 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 90/211 (42%), Gaps = 8/211 (3%) Query: 9 HGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEAD 64 G++L++ +L L L+ L +TG+ + Q ++D ++L+D+ Sbjct: 3 EGYSLIIAEDHTLLREGLKSLLQSVPHLIVTGEASDGQMAVDLCDRNQPELVLMDISMPR 62 Query: 65 KKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGV 124 + + + +++ +++L+L Y +G + + ++ V Sbjct: 63 MDGVQATR-LIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESV 121 Query: 125 LRGECYFTQKLASYLITHS---GNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLF 181 L G+ Y + ++ ++ + S+ LT RE+EI + G N EIA L Sbjct: 122 LGGKIYLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEMLV 181 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 +S TV+ H NL +K+ V + + + A + Sbjct: 182 VSVKTVEKHRSNLMQKLGVHSAAELRALALE 212 >UniRef50_A8ZMB6 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZMB6_ACAM1 Length = 215 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 44/213 (20%), Positives = 85/213 (39%), Gaps = 9/213 (4%) Query: 10 GHTLLLITKSSLQATALLQHLKQSLA--ITGKLHNIQRSLDDI--SSGSIILLDMMEADK 65 +LL+ L + L+ + G N + ++ +IIL+D+ + Sbjct: 2 AIQILLVDDQYLIREGIASLLELEEDLEVAGMAANGKEAIKQAIDLKPNIILMDIRMPEL 61 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 + + + + +I++L T +D G + + ++ Sbjct: 62 NGVEATAK-IKQSLPHCQIIMLTTFDDEELIVQSLLAGACGYLMKDIPPDDLGQAIKLAD 120 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTE----SALLTHREKEILNKLRIGASNNEIARSLF 181 G ++A LI R LT RE E+L L G +N EIA++ Sbjct: 121 AGVFQLAPEVAGKLIGSLKTQRAGDAPKLPTDTPLTTRELEVLKLLAKGNTNKEIAKAFN 180 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 +SE TVK H+ N+ ++ +++RTQA +A ++ Sbjct: 181 LSEGTVKNHVSNILMRLGLRDRTQAAVYAVEHG 213 >UniRef50_D0LE76 Response regulator receiver n=2 Tax=Actinomycetales RepID=D0LE76_GORB4 Length = 228 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 46/215 (21%), Positives = 92/215 (42%), Gaps = 6/215 (2%) Query: 4 EVHSIHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLD 59 + + +LL+ L T L + L+ I G+ + ++ S ++++D Sbjct: 7 DETAAPAIRVLLVDDQELIRTGLRRILRVRDGFHIVGECADGSEVPAAVAEHSPDVVVMD 66 Query: 60 MMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVN 119 + + I L+ N+ +L+L T +D G E ++ Sbjct: 67 LRMRNVDGITATS-MLAALNDPPPVLVLTTFDDDKLLSGALRAGAAGFILKDSPAESLIW 125 Query: 120 GLQGVLRGECYFTQKLASYLITHSGNYRY-NSTESALLTHREKEILNKLRIGASNNEIAR 178 ++ V+R + + ++T + LT RE ++L + G +N EIA Sbjct: 126 AVRAVVRDGAFLDPAVTGRVLTGYRRSTTGDIATPDELTERETDVLRLVARGRTNAEIAA 185 Query: 179 SLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 L ISE TVK+H+ ++F K+ +++R A+ +A D+ Sbjct: 186 GLGISEVTVKSHINHIFTKLDLRDRAAAIVYAFDH 220 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 243 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 46/209 (22%), Positives = 87/209 (41%), Gaps = 12/209 (5%) Query: 8 IHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDI--SSGSIILLDMMEA 63 + G +L+ + L L + + G+ + + L ++LLD+ Sbjct: 1 MEGIRILVADDHPMLREGLSAVLGTRPGFEVVGEAGDGEEVLRLASGLRPDVVLLDLEMP 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + + L ++ K+++ +D G + + + ++ Sbjct: 61 GTGGVEVLRR-LRGLDDPPKVVVFTAYDD-ERLLEALREGARGCLLKGASRTEIFDAVRT 118 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 V G ++ + ++ ES LT RE E+L + G +N E+AR+LFIS Sbjct: 119 VHAGGSVIPPEITARVLKEMR------GESEPLTPRELEVLRLVARGLTNREVARALFIS 172 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 E TVK H+ +L K+ +NRTQAV+ A + Sbjct: 173 ERTVKFHVSSLLAKLRAENRTQAVAIARE 201 >UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG8_SYMTH Length = 197 Score = 243 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 79/188 (42%), Gaps = 7/188 (3%) Query: 31 KQSLAITGKLHNIQRSLDD--ISSGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLN 88 + L + G+ + +++ ++++D+ D I + + +++ L Sbjct: 5 EPDLELVGEAGRGEEAVELTKALKPDVVIMDISLPDMSGIEATR-LIKEAVPETRVIGLT 63 Query: 89 TPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHS----G 144 E+ P+ + +V ++ V+ G+ + ++ G Sbjct: 64 MHEEEPFVLEFLRAGADAYIVKRSAAADLVGAIRAVMEGQAVLDPAVTRAVVEGYVSRPG 123 Query: 145 NYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRT 204 E LT RE+EIL + G +N EIAR L+ISE TV+TH N+ K+ + +RT Sbjct: 124 RAVGQPEEPCPLTPREREILVLIAEGLTNAEIARRLYISEKTVQTHRSNMLDKLGIHDRT 183 Query: 205 QAVSWAND 212 + V +A Sbjct: 184 ELVRYAIR 191 >UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR family n=2 Tax=Frankia sp. EAN1pec RepID=A8L9Z7_FRASN Length = 218 Score = 243 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 41/206 (19%), Positives = 83/206 (40%), Gaps = 5/206 (2%) Query: 11 HTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADKK 66 +LL L L + L + G+ + ++++D ++L+D+ Sbjct: 8 IRVLLADDHRLVLDGLSALIDSVDGLTVVGEATSGEQAVDLAGTEHPDVVLMDIEMPGIG 67 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + + + + I +++L + + G Q+ VV + V R Sbjct: 68 GVEATRRITTAQ-PTIAVVMLTMYGEDEFVFAALRAGARGYLLKGAQQKDVVRTIGAVAR 126 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 G+ F +A ++ + + LT RE+E+L+ L G N+ IAR L ++ T Sbjct: 127 GDAVFGPDVAHRVLRTFTSPPAENAPFPELTEREREVLSLLANGWPNSRIARHLQLTPKT 186 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWAND 212 V ++ N+ K+ +RT A+ A Sbjct: 187 VANNVSNILAKLHAPDRTAAILRARR 212 >UniRef50_Q027R2 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027R2_SOLUE Length = 247 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 88/225 (39%), Gaps = 18/225 (8%) Query: 6 HSIHGHTLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMM 61 S +++ + L L L++ + + + ++ LD + I+LLD+ Sbjct: 18 SSKPKIRIVVADDHPIFRDGLCRLLALEEDFEVVAQAQDGRQVLDVLQQHEPDILLLDLK 77 Query: 62 EADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGL 121 + L N ++++L +D +G+ E ++ + Sbjct: 78 MPGLDGL-ATLQRLQIAKNKTRVIVLTASDDKNEFVQAMKLGTSGIVLKQTATELLIKSI 136 Query: 122 QGVLRGECYFTQKLASYLITHS-------------GNYRYNSTESALLTHREKEILNKLR 168 + V GE + + +I E + L+ RE+EI+ + Sbjct: 137 RKVHAGEIWLDSHTTAAVIRQFVANDETPAMAAPSQAPPTRERERSPLSQREREIVALVA 196 Query: 169 IGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 G N E+A +FISE TVK HL+N+F K+ V +R + +A N Sbjct: 197 QGFKNKEMAEKMFISEQTVKNHLHNIFDKLGVSDRLELALYAIHN 241 >UniRef50_A4FAA4 Two component system response regulator n=2 Tax=Actinomycetales RepID=A4FAA4_SACEN Length = 218 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 84/210 (40%), Gaps = 10/210 (4%) Query: 12 TLLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +LL + L + L+ L + + + ++ + ++++D+ Sbjct: 3 RILLAEDEQIVRAGLRKILESAGDLTVIAEAGDGAEAVTGVRRHAPDVVVMDIQMPRLDG 62 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + S KIL+L + +G E ++N ++ + G Sbjct: 63 LAATRQITSLPAPP-KILILTMFDFDANVYSAIEAGASGFLLKDARPEELINAIRVIADG 121 Query: 128 ECYFTQKLASYLITHSGNYRYNSTE-----SALLTHREKEILNKLRIGASNNEIARSLFI 182 + + + L++H + LT RE++IL+ + G SN IA++L Sbjct: 122 DAMLSPSVTRRLLSHFADRNSPRGPTAVRGLDELTPRERQILSLVGGGLSNASIAKTLGA 181 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 +E+TVK H+ L K+ +NR Q A++ Sbjct: 182 TESTVKGHVSRLLMKLDCENRVQLALIAHN 211 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 50/217 (23%), Positives = 96/217 (44%), Gaps = 13/217 (5%) Query: 8 IHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEA 63 + +LL+ ++ + L +++ I G+ N ++ + ++++D+ Sbjct: 1 MKKINILLVDDHTIVRDGIKATLKDQKNFHIVGEAANGLDGIEAVKQLKPDVVIMDITMP 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + I D +S+K + K+L+L+ ++ Y G D++ + + Sbjct: 61 EMSGIEA-ADVISKKYPDSKVLILSMHDNETYILKSVEAGAYGYLLKDVDKDEFIKAITA 119 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNST--------ESALLTHREKEILNKLRIGASNNE 175 V G+ YF ++S L++ + + + LT REK IL + G +N E Sbjct: 120 VYNGDKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNNRE 179 Query: 176 IARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 IA L IS T++TH N+ KK+ VKN + V A D Sbjct: 180 IADGLGISIRTIETHRANIMKKLKVKNAVELVRIAID 216 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 10/213 (4%) Query: 9 HGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 + L+ ++ L L I G+ + +++LD I +++ D+ Sbjct: 4 TNTKIFLVDDHAILREGLKMILSGQFEICGESGDAEKALDQIGKLNPDLVITDISMPGLS 63 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I ++ L ++ NI+ ++L+ ++ Y ING + ++ ++ V + Sbjct: 64 GIDLVKN-LRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDLLRAIEAVHK 122 Query: 127 GECYFTQKLASYLITHSGNYRYNSTE-------SALLTHREKEILNKLRIGASNNEIARS 179 GE Y + + ++ ++ E ++L+ RE+EIL + G SN I + Sbjct: 123 GETYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNSNESIGKI 182 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 L IS TVK H N+ KK+ + V +A Sbjct: 183 LGISPATVKVHRANIMKKLNLHKVADLVMYAIR 215 >UniRef50_D1BCA8 Two component transcriptional regulator, LuxR family n=18 Tax=Bacteria RepID=D1BCA8_SANKS Length = 234 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 +++ + ++ L + + + G+ + ++++D S +++ D+ Sbjct: 30 RVVVADDHPVVRAGIVGMLGVESDIEVVGEAEDGRQAVDLARTLSPDVVITDLRMPVLDG 89 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + ++ + +++++L T E G + +V G++ RG Sbjct: 90 VGATRE-IVALPGTVRVVVLTTYETDGEILRAVEAGATGYLLKDTPRAELVAGIREAARG 148 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 + T +A+ L++ G+ LT RE E+L + G SN + LFISE TV Sbjct: 149 QTVLTPSVATRLVSQVGSRA------DRLTPREVEVLRAVARGLSNAAVGHELFISETTV 202 Query: 188 KTHLYNLFKKIAVKNRTQAVSWA 210 KTHL F K+ V +RT AV+ A Sbjct: 203 KTHLIRAFGKLGVNDRTHAVTVA 225 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 243 bits (621), Expect = 3e-63, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 80/212 (37%), Gaps = 6/212 (2%) Query: 8 IHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDD--ISSGSIILLDMMEA 63 + ++L+ SL + + L + + G+ + L + ++ +D Sbjct: 1 MELCRIILVDDHSLFRSGMRGLLDRYDGIRVVGEASTGEEFLAMLPATEADVVFMDFAMP 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + L+ + +K++ L+ D Y G + V+ ++ Sbjct: 61 GMNGAETTEKALALE-PGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAIET 119 Query: 124 VLRGECYFTQKLASYLITHSGNYRYN-STESALLTHREKEILNKLRIGASNNEIARSLFI 182 V G YF +++ L + L+ RE EIL + G SN EIA LFI Sbjct: 120 VAAGGTYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADELFI 179 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 S+ TV H N+ +K KN V +A + Sbjct: 180 SKRTVDKHRANILEKTGCKNTASLVVYAVRHG 211 >UniRef50_A8L3K7 Two component transcriptional regulator, LuxR family n=16 Tax=Actinomycetales RepID=A8L3K7_FRASN Length = 244 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 79/206 (38%), Gaps = 5/206 (2%) Query: 8 IHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEA 63 + + ++ + L Q L + + G+ +L I + + +LD Sbjct: 33 MEKIRVFVLDDHEIVRNGLRQTLARHDDIEVVGEAGLAAEALRRIPALHPHVAVLDGRLP 92 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 D I ++ ++ L+L + +D G +V ++ Sbjct: 93 DGSGIDVCREV-RSALPDVACLILTSYDDDEALFSAIMAGAAGYVLKEIRGNDLVGAIRT 151 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 V G+ + ++ + A L RE+EIL + G +N +I L +S Sbjct: 152 VASGQSLLAPSVTRRVLERLRDGPSEDPAMATLNQREREILQLIADGLTNRQIGTRLGLS 211 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSW 209 E TVK ++ ++ +K+ + +RTQA + Sbjct: 212 EKTVKNYVSSILEKLGLASRTQAAVY 237 >UniRef50_A8LG56 Two component transcriptional regulator, LuxR family n=4 Tax=Actinomycetales RepID=A8LG56_FRASN Length = 244 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 90/208 (43%), Gaps = 5/208 (2%) Query: 10 GHTLLLITKSSLQATALLQHLKQS--LAITGKLHNIQRSLDDISS--GSIILLDMMEADK 65 ++LL+ L L L+ + + G+ + + + I ++++D+ Sbjct: 28 PVSVLLVDDEELVRVGLRVILESGGEIDVVGEASDGSQVVPLIRENTPDVVIMDIRMPRV 87 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 + ++ L+ + KIL+L T E Y NG +V ++ ++ Sbjct: 88 DGLAAIREILADVADPPKILVLTTFELDDYVYEALRSGANGFLLKRARPAEIVQAVRTIV 147 Query: 126 RGECYFTQKLASYLI-THSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISE 184 E + Y+ + + A+LT RE ++L + G SNNEIA L++ Sbjct: 148 SSESLLFPEAIRYMAGKRPNREAHETMRRAVLTDREADVLRLISEGLSNNEIANRLYLGA 207 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWAND 212 TVK+H+ ++ K+ ++RTQAV A + Sbjct: 208 QTVKSHVSSVLAKLGARDRTQAVIIAYE 235 >UniRef50_C4ZEG3 Two-component response regulator (Extracellular proteinase response regulator) n=3 Tax=Bacteria RepID=C4ZEG3_EUBR3 Length = 214 Score = 242 bits (620), Expect = 5e-63, Method: Composition-based stats. Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 5/208 (2%) Query: 10 GHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADK 65 +++ S+ L L+ + + + N + LD + ++LLD+ Sbjct: 2 AINIMITDDHSMIREGLKNLLELDGDIKVIAEAENGEDCLDKLKTFRPDVLLLDINMPKM 61 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 + + L + + +K+L+L + Y ING + + + + Sbjct: 62 NGLEVLK-ALKDRKSKVKVLVLTVHNETEYLMKAVDIGINGYVLKDSESAELKKAIFTIA 120 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 GE Y L L + + + LT RE E+L ++ +G N +IA+ + ISE Sbjct: 121 DGETYIQPSLIPALNSKMIQKNEDELKIDALTKREMEVLKEMAVGKFNRDIAKEMKISER 180 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWANDN 213 TVK H+ ++FKK+ V +RTQA +A N Sbjct: 181 TVKNHISSIFKKLEVTDRTQAAVFAIRN 208 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 242 bits (620), Expect = 5e-63, Method: Composition-based stats. Identities = 43/205 (20%), Positives = 85/205 (41%), Gaps = 5/205 (2%) Query: 13 LLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADKKLI 68 +LL+ ++ L L+ + + G+ + + ++ +ILLD+ + + Sbjct: 4 ILLVDDHAVLRAGLRLLLESQPDMVVVGEAEDSRTAITQATTLQPDLILLDLSLTNSSGL 63 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 +L +IL+L +D Y +G ++ ++ VLRGE Sbjct: 64 AAI-QSLRAAAPQARILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVLRGE 122 Query: 129 CYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVK 188 Y L L+ + L+ RE+E+L + G + EIA L +S TV+ Sbjct: 123 LYIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSPKTVE 182 Query: 189 THLYNLFKKIAVKNRTQAVSWANDN 213 T+ +K+ +++R V +A D+ Sbjct: 183 TYRTRGMEKLGLRSRAALVQFALDH 207 >UniRef50_C0GJ72 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ72_9FIRM Length = 212 Score = 242 bits (620), Expect = 5e-63, Method: Composition-based stats. Identities = 47/210 (22%), Positives = 93/210 (44%), Gaps = 7/210 (3%) Query: 8 IHGHTLLLITKSSLQATALLQHLKQS--LAITGKLHNIQRSLDDISS--GSIILLDMMEA 63 ++L+ S+ L L+ + + G+ + ++ + +ILLD Sbjct: 2 KKNIKVMLVDDHSVVRQGLRLLLELDDTMEVCGEAETLTGAVAVCAEVAPDVILLDFKLP 61 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 D I + L R+ +KI++L D +G + E ++N +Q Sbjct: 62 DGDGIIGCGN-LKRQFPQVKIIILTAYADDHLVTETIKAGADGYLLKNVESEELINTIQA 120 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 V +G+ + L + + + + LT +E +IL+ + +G +N EIA + IS Sbjct: 121 VHKGQSVLDPSVTEILFDNIKSQQPKKEHN--LTPKEVQILDMISVGKANKEIAEIMKIS 178 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 + TV+ ++ N+ +K+ V NRT+A S+ N Sbjct: 179 DKTVRNYVSNILQKLNVSNRTEAASYWMRN 208 >UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paenibacillaceae RepID=C0ZBD9_BREBN Length = 215 Score = 242 bits (620), Expect = 5e-63, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 94/211 (44%), Gaps = 6/211 (2%) Query: 8 IHGHTLLLITKSSLQATALLQHLKQS--LAITGKLHNIQRSLDDISS--GSIILLDMMEA 63 ++ + +L+ + A+ L + G+ N + + ++L+D+ Sbjct: 1 MNAYRVLIADDHPMARMAIRSLLDPDPSFEVIGEAQNGEEAFLLCGQIQPDLVLMDINMP 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + ++ + +IK+++L+ +D G + + +N L Sbjct: 61 KWSGLEATREV-KKAYPHIKVVILSVSDDVADLITAIQFGAQGYLLKNLEPDDWINYLHA 119 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTE-SALLTHREKEILNKLRIGASNNEIARSLFI 182 +L + T+++A+ L+ A+LT RE+EI+ + G +N EI+ +L I Sbjct: 120 LLGEDSELTREMATRLMYRFRQEEATDEMVPAVLTPREREIVMYVGAGKTNREISEALII 179 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 +ENTVK HL N+ +K+ + NR Q ++A + Sbjct: 180 AENTVKNHLKNILEKLQLANRVQLAAYAVRH 210 >UniRef50_C5C8Q1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Micrococcus luteus NCTC 2665 RepID=C5C8Q1_MICLC Length = 227 Score = 242 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 87/218 (39%), Gaps = 14/218 (6%) Query: 8 IHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEA 63 +L+ L + AL + + G + N +++ + ++L+DM Sbjct: 2 SEELRILIADDQPLMSGALRVLVGSAPGMTCVGVVANGVEAVEACAAIEPDVVLMDMQMP 61 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + + + + I++L + T Y G + ++ +Q Sbjct: 62 LMDGVEATRR-IKDTHPAIRVLAITTFTSEDYLVPALRAGAGGYLLKDAEPPAILGAIQA 120 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTES---------ALLTHREKEILNKLRIGASNN 174 V RGE + +A+ L+ R + + LT RE +L L G SN Sbjct: 121 VHRGESVLSPAVAAKLLASIERDRPTVGPTSVQPGSPDGSDLTERELGVLRLLARGQSNP 180 Query: 175 EIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 EIA +LF+SE+TVK +L + K+ V++R Q + A Sbjct: 181 EIAANLFVSESTVKANLTRIMAKLEVRDRVQLIIRAAQ 218 >UniRef50_C6WIC9 Two component transcriptional regulator, LuxR family n=31 Tax=Actinobacteria (class) RepID=C6WIC9_ACTMD Length = 302 Score = 242 bits (619), Expect = 6e-63, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 9/209 (4%) Query: 11 HTLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 +++ +L + L L + G + +R++ + ++L+D+ + Sbjct: 71 IGVVIADDQALLRGSFEVLVGSAPDLRVLGTAEDGERAVAVAARVRPDVVLMDVRMPNVD 130 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I + + +++L+L T + Y +G ++ ++ V Sbjct: 131 GIEATARICAAQA-GVRVLILTTFDLDEYVYAALRAGASGFLLKDTPPADLLAAIRVVAS 189 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALL---THREKEILNKLRIGASNNEIARSLFIS 183 GE + + LIT R + L T RE+E+L + G SN EI +L +S Sbjct: 190 GEALLSPSVTRRLITEFA-ARPAARPLPALDAVTAREREVLRLVAEGLSNTEITEALHVS 248 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 T+KTH+ L K+ ++R Q V A + Sbjct: 249 RGTLKTHVGRLLHKLGARDRAQLVIAAYE 277 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 242 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 47/214 (21%), Positives = 88/214 (41%), Gaps = 7/214 (3%) Query: 7 SIHGHTLLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDISS--GSIILLDMME 62 + +L+ +L L + + G+ N +++ +ILLD+ Sbjct: 2 TQSTIKILITEDHALVRKGLKSLISSRSEFQVVGEADNGLAAIEMTRKCKPDLILLDLSM 61 Query: 63 ADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 + + L ++ +KIL++ Y +G +D + + ++ Sbjct: 62 PKMNGLATMRQ-LKKERPEVKILVITMHASQDYLIPALKEGADGYLLKGDDPQELFMAIR 120 Query: 123 GVLRGECYFTQKLASYLITHSGNY--RYNSTESALLTHREKEILNKLRIGASNNEIARSL 180 ++ G+ Y + L+ LI N R + A LT REKE+ + G +N +IA L Sbjct: 121 AIMDGKAYLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTNQQIADLL 180 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 FIS TV H NL KK+ + + + ++A N Sbjct: 181 FISPKTVDKHRTNLMKKLDLHSAREVSNFALKNG 214 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 242 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 13/207 (6%) Query: 5 VHSIHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDM 60 + + +L++ + + L L + L + G+ N ++ ++L+D+ Sbjct: 1 MPKLKPIRILVVDDHHVVRSGLAASLGLEDDLNVVGEAGNAGEAVTQFRKHHPDVVLMDL 60 Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 D L R+ + ++L+ T + G +E +++ Sbjct: 61 RLPGANGTAATAD-LRREWPDARVLMFTTFDGEEDIYRAMQAGARGYLLKSAAREELLSA 119 Query: 121 LQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL 180 ++ V GE + + LA L + RE+E+L + G +N EIA +L Sbjct: 120 IRAVAAGERHLSAALAQRLAGRVAAPDV--------SDREREVLQLIARGKANKEIAAAL 171 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAV 207 ISE TVK H NLF K+ V +R QA Sbjct: 172 GISEETVKRHASNLFVKMGVADRAQAT 198 >UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Actinomycetales RepID=D2AUN6_STRRD Length = 226 Score = 242 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 45/211 (21%), Positives = 88/211 (41%), Gaps = 10/211 (4%) Query: 11 HTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADKK 66 +LL ++ + L + + + + + ++D + ++LLD+ Sbjct: 2 IRVLLADDEAMIRAGVRAILAADPEIEVVAEAGDGREAIDLVLSHRPDVVLLDIRMPRMD 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + + L R +++L T + Y G D ++ G+ V Sbjct: 62 GLAAVAE-LRRVAPGTAVVMLTTFGEDDYIARALGEGAGGFLLKSGDPRELLAGIHAVAE 120 Query: 127 GECYFTQKLASYLITHSGNYR-----YNSTESALLTHREKEILNKLRIGASNNEIARSLF 181 G Y + ++A +IT R + A LT RE+++L + G SN +IAR L+ Sbjct: 121 GAAYLSPRVAHRVITQLTGGRMTRVVAAREQVAALTPRERDVLALVGEGLSNGQIARRLY 180 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 + E TVK H+ + ++ +NR QA A++ Sbjct: 181 LVEGTVKAHVSAILTRLGARNRVQAAILAHE 211 >UniRef50_B9MPQ9 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=B9MPQ9_ANATD Length = 211 Score = 242 bits (618), Expect = 8e-63, Method: Composition-based stats. Identities = 48/206 (23%), Positives = 94/206 (45%), Gaps = 5/206 (2%) Query: 8 IHGHTLLLITKSSLQATALLQHLK-QSLAITGKLHNIQRSLDDISS--GSIILLDMMEAD 64 + +L++ + L L+ ++ + N + +++ + ++L+D+ Sbjct: 1 MKKPKVLIVDDNPAVLDGLKIILELENFEVVSLCTNAKEAIEFLEKKHADVVLMDIRMPV 60 Query: 65 KKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGV 124 I + + K N+K+++L T + Y +G D + +VN + V Sbjct: 61 MDGIEGTFN-IKTKFPNVKVIILTTFCEEDYIKKSLSFGADGYILKSSDAKHIVNSILSV 119 Query: 125 LRGECYFTQKLASYLITHSGNYRYNS-TESALLTHREKEILNKLRIGASNNEIARSLFIS 183 L G+ +++A Y+ ++ LT RE EI + G SN EIAR LFIS Sbjct: 120 LDGKVVMDKEIALYISDVLKRTSKQLLEKTQNLTERELEIAKLISQGYSNKEIARMLFIS 179 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSW 209 E TV+ ++ ++ +K+ +KNRTQ + Sbjct: 180 EGTVRNYITSILQKLNLKNRTQIAVY 205 >UniRef50_D2PZY5 Two component transcriptional regulator, LuxR family n=2 Tax=Actinomycetales RepID=D2PZY5_9ACTO Length = 252 Score = 242 bits (618), Expect = 9e-63, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 87/237 (36%), Gaps = 25/237 (10%) Query: 1 MFNEVHSIHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSII 56 M +L+ + T L L + L + + + +L I ++ Sbjct: 1 MVAAAEVTDQIRVLVADDQGVIRTGLAMILDHEPDLTTVAQAGDGEEALRLIDRFDPDVV 60 Query: 57 LLDMMEADKKLIHYWQDTLSRKN----NNIKILLLNTPEDYPYRDIENWPHINGVFYSME 112 L+D+ + + + +L+L T +D Y +G Sbjct: 61 LMDIRMPVMDGLVATERITRANQEAGRSRPAVLVLTTFDDEAYVLSAVRAGASGFLLKDT 120 Query: 113 DQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYN-----------------STESAL 155 D + +V ++ V RG+ L+ + A Sbjct: 121 DPDLLVAAVRAVHRGDSLVDPASTRVLLERCVELERQVGADPVAAAPHAADGRWTGLLAQ 180 Query: 156 LTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 L+ RE+++L + G SN ++A LF+SE TVKTH+ ++ K+ + +R QAV A + Sbjct: 181 LSERERDVLVWMARGLSNRDLANKLFVSETTVKTHVSSVLSKLGLSSRVQAVVVAYE 237 >UniRef50_UPI0001B502C9 two component LuxR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B502C9 Length = 229 Score = 242 bits (618), Expect = 9e-63, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 84/207 (40%), Gaps = 9/207 (4%) Query: 10 GHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADK 65 +L+ ++ L L + + G+ N + ++ ++L+D++ Sbjct: 2 ALRVLIADDHAVVRQGLRMILGLDNEIKVVGETTNGREAVRLARELCPDVVLMDLLMPVM 61 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 + + + + ++++ L + D G + + + N ++ Sbjct: 62 DGVSATAE-IRQDIPEVEVVALTSSLDDAMVMGAVRAGAIGFLLKNAEADDLRNAVKAAA 120 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 G+ + + S L+ + LT RE E+L L G +N EIAR L I + Sbjct: 121 AGQIHVSPAAISRLMGQVR----EPSGPEQLTERETEVLTMLARGKANKEIARDLRIGQQ 176 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWAND 212 TVKT++ ++ K+ V +RTQA +A Sbjct: 177 TVKTYVSHILTKLGVHSRTQAAVYAVQ 203 >UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococci RepID=Q9RU37_DEIRA Length = 225 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 84/207 (40%), Gaps = 9/207 (4%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +LL+ ++ L L + + + G+ N + +L + ++++D+M Sbjct: 15 RVLLVDDHAVVRQGLRLFLGLDEGIEVVGEAANGEEALQEAERLRPEVVVMDLMMPVMDG 74 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I ++ L R+ + +++ L + + + + + + + RG Sbjct: 75 ITATRE-LRRRLPDTEVIALTSTLEENKVNGAIEAGAISYMLKDASSDTLADAIHAAARG 133 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 E + A L+ + LT +E +L L G SN +IA +SE TV Sbjct: 134 EVRLHPEAARRLVRDFR----SPEMRESLTPKETAVLQLLARGQSNKDIAAEQGVSEATV 189 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDNL 214 KTH+ L K+ + +RTQA +A Sbjct: 190 KTHVSRLLSKLGLDSRTQAALYALKYG 216 >UniRef50_B2A7N5 Two component transcriptional regulator, LuxR family n=5 Tax=Firmicutes RepID=B2A7N5_NATTJ Length = 232 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 49/227 (21%), Positives = 92/227 (40%), Gaps = 26/227 (11%) Query: 8 IHGHTLLLITKSSLQATALLQH--LKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEA 63 + +++ ++ A +L L+ + + N + +L+ IIL+D+ Sbjct: 1 MSKIKVMIADDQTILADSLKTIIDLEDDMEVVAVSSNGEETLEISEKLLPDIILMDIRMP 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + + L K IKI++L T + Y +G D +++++ ++ Sbjct: 61 KMDGVECTKK-LKEKYPEIKIIILTTFDHDEYIVDALSYGASGYLLKDIDGDKLISSIRD 119 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTES---------------------ALLTHREKE 162 + +A+ LI N + T+ LT RE E Sbjct: 120 AYNDKLLIPTSIAAKLIGKIDNRKQQPTDDHKDEPLKSQDRKESQKEINLYEELTQREIE 179 Query: 163 ILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSW 209 I + G SN +IA LFI++ TVK ++ N++ K+ VK RT AV + Sbjct: 180 IAQLMVAGLSNKKIAEKLFITQGTVKNYITNIYSKLGVKERTSAVLY 226 >UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B0G6_SYNWW Length = 213 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 93/210 (44%), Gaps = 7/210 (3%) Query: 8 IHGHTLLLITKSSLQATALLQHLKQS--LAITGKLHNIQRSLDDISS--GSIILLDMMEA 63 + +++ L L + L+ + + ++ + Q +++ II++D+ Sbjct: 1 MDKARVVIADDHVLVREGLRKLLELDSNIKVIDEVGDGQGAINIARKEKPDIIIMDVNMP 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 I + + R+ +++I+ L E + +V+ + Sbjct: 61 GTDGIVATR-VIKRELPSVRIIALTVYEGEE-VVDMVKAGASAYILKDVAGSELVDTIHR 118 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 V+ GE ++A+ L+ +E LT REK++L L G +N E+A +FIS Sbjct: 119 VMNGEVVIYPRVANRLVRELRQSENRKSEI-RLTKREKDVLTLLVKGNTNKEMAEVMFIS 177 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 E TVK HL ++F+K+ VK+RT A +A N Sbjct: 178 EKTVKNHLTSIFRKLGVKDRTHAAIYALKN 207 >UniRef50_B1L0K3 DNA-binding response regulator, LuxR family n=22 Tax=Bacteria RepID=B1L0K3_CLOBM Length = 217 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 92/214 (42%), Gaps = 9/214 (4%) Query: 8 IHGHTLLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDISSGSI--ILLDMMEA 63 ++ ++++ L L L + + G + + +L + +L+D+ Sbjct: 1 MNKTNIIVVDDEKLIREGLKIILSTYNDIEVVGLAGDGREALSLCKEKDVQVVLMDIRMP 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + + + + + +IKIL+L T D Y +G E + G++ Sbjct: 61 NCDGVLGTR-IIKEQFPHIKILILTTFNDKEYIHEALKFGASGYLLKDSSNELIYEGIKA 119 Query: 124 VLRGECYFTQKLASYLITHSGNYRY----NSTESALLTHREKEILNKLRIGASNNEIARS 179 ++G +A+ +I ++ + + LT RE I+ ++ G SN EIA Sbjct: 120 CVKGNVVVHPDVANNIILNTTYEKELNDDDINLKYNLTEREINIIRQIANGLSNKEIAEK 179 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 +++SE T+K ++ + K+ +++RTQ +A N Sbjct: 180 IYLSEGTIKNNISTILSKLDLRDRTQIAIFAFKN 213 >UniRef50_Q06YY8 Two-component system response regulator n=2 Tax=Streptomyces RepID=Q06YY8_9ACTO Length = 223 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 83/214 (38%), Gaps = 12/214 (5%) Query: 11 HTLLLITKSSLQATA---LLQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADK 65 +LL ++ + + + G+ + ++ + L+D+ Sbjct: 3 IKVLLADDQAMIRRGPCGSSWRTSRDITVVGEAEDGAEAIAMARRLRPDVCLVDIRMPKL 62 Query: 66 KLIHYWQDTL--SRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 I + + ++++++ T + Y G ++ ++ Sbjct: 63 DGIEVTRALAGPKAADP-MRVIVVTTFDLDEYVYGALRGGAAGFVLKDAGPALLIEAVRA 121 Query: 124 VLRGECYFTQKLASYLITHSGN----YRYNSTESALLTHREKEILNKLRIGASNNEIARS 179 GE + + L+ H R + S+ L+ R E++ + G +N EIA Sbjct: 122 AYNGEALVSPSVTLRLLKHLNESQAMPRGGAARSSELSGRALEVVRAIARGRTNQEIAAE 181 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 LFIS +TVK+HL + K+ V+NRT+ WA +N Sbjct: 182 LFISLSTVKSHLSGIQTKLGVRNRTEIAVWAWEN 215 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 90/212 (42%), Gaps = 9/212 (4%) Query: 10 GHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADK 65 ++L+ + + L L + + + + + +++ + II++D+ Sbjct: 2 KTRIMLVDDHPVFRSGLKHILCTEADYHVIAEADDGESAIEMAAEANPDIIIMDISMPGL 61 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 I ++ + RK +I+IL+L D + +G +V+ ++ V+ Sbjct: 62 DGIEVTRE-IKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVHAVKLVM 120 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTESA----LLTHREKEILNKLRIGASNNEIARSLF 181 GE Y L L + + + + L+ RE+E+L + +G + EI+ LF Sbjct: 121 NGEHYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEISTELF 180 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 IS TV T+ + +KI K ++ V +A + Sbjct: 181 ISIKTVDTYKKRVMEKIGSKKKSALVRYALKH 212 >UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD Length = 212 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 83/208 (39%), Gaps = 6/208 (2%) Query: 11 HTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKK 66 ++L ++ L+ L + + N +++ + ++D+ + Sbjct: 2 IRVMLADDHTILRQGLVSLLSKDADCTVVAEASNGLEAVEKALETRPQVAVIDISMPELN 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + + + K KIL+L E+ Y +G E +++ ++ + Sbjct: 62 GMEVVKR-IHDKLPECKILVLTMHEEQEYVIHMVRAGASGYLLKDSASEELIDAVKALAT 120 Query: 127 GECYFTQKLASYLITHSGNYRYN-STESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 G+ Y++Q AS L T LT RE+E+ + + G + +IAR+L IS Sbjct: 121 GKTYYSQYAASVLATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTLDISVK 180 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWANDN 213 T + H + K+ V N + V +A + Sbjct: 181 TAENHRGKVLDKLGVSNTAELVRYAAKH 208 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 85/214 (39%), Gaps = 8/214 (3%) Query: 8 IHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEA 63 +LL + L L + + I G+ + Q ++ + S I+L+D+ Sbjct: 16 KKTIKVLLADDHPVVRKGLGSCLNNLEHIEIVGEAVDGQETVSKVRELSPEIVLMDLDMP 75 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + + + R+ +K+L+L+ + Y G +V ++ Sbjct: 76 TMSGLEATK-IIRREFPLVKVLILSIHTNKDYVLQIIKSGAQGYVLKDAPLTELVRAIES 134 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTESA---LLTHREKEILNKLRIGASNNEIARSL 180 V G +F+ ++ ++ N ES LT+RE E+L+ + G SN E+A + Sbjct: 135 VHGGGAFFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKEMASRM 194 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 + TV+TH + K+ + N +A + Sbjct: 195 GVGVRTVETHRERVMNKLDIHNVAGLTKYAIAHG 228 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 80/209 (38%), Gaps = 7/209 (3%) Query: 10 GHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADK 65 ++L +L + L+ + I G+ + + ++ + + I ++D+ Sbjct: 4 PLKIVLADDHALVRAGIRTLLEKLPGVTIVGEAGDGRETVTLVHTFAPDIAIMDITMPGL 63 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 ++R++ K+L+L+ Y G + L V Sbjct: 64 NGFDATAR-IAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLALNAVR 122 Query: 126 RGECYFTQKLASYLITHSGNYRYNS--TESALLTHREKEILNKLRIGASNNEIARSLFIS 183 +GE Y + ++ ++ + + LT R +EI+ + G S EIA L +S Sbjct: 123 KGETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLLNLS 182 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 T++TH +L ++ + + V +A Sbjct: 183 VKTIETHRMHLMARLGLHDVAGVVRYALR 211 >UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexaceae RepID=A9WKI8_CHLAA Length = 209 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 91/212 (42%), Gaps = 11/212 (5%) Query: 8 IHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEA 63 + + L+ S+ L +L + + + G+ N + +L S +I++D++ Sbjct: 1 MSPIRVALVDDHSIVRRGLSAYLAAQPDIVVVGEAANGESALQMASTWQADVIVMDVLMP 60 Query: 64 D-KKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 I + L R + I++L+ D E+++ ++ Sbjct: 61 GGIDGIETTRQ-LKRLIPHTHIIILSGYADDARVIGALRAGAITYIEKESQPEQLLEAIR 119 Query: 123 GVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFI 182 G + G+ L ++ S + LT RE+E+L + G +N EIA L + Sbjct: 120 GAMAGKAVLAPALMQRILE-----AQTSKAADTLTEREREVLKLVAEGLTNAEIASRLTV 174 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 SE TVKTH+ ++ +K+ + +RTQA +A + Sbjct: 175 SEETVKTHVASILRKLGLAHRTQAAIYALRHG 206 >UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0L7_PELTS Length = 223 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 89/211 (42%), Gaps = 7/211 (3%) Query: 8 IHGHTLLLITKSSLQATALLQHLK-QSLAITGKLHNIQRSLDDISS--GSIILLDMMEAD 64 LLL+ L +L + + + G+ N + +L I+ ++IL+D+ Sbjct: 6 TSEIQLLLVDDDPLVRRSLRMLFELHDINVVGEASNGEEALKAIARLKPTMILMDVNMPK 65 Query: 65 KKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGV 124 I + + +I++++L + + E+++ ++ V Sbjct: 66 MDGIQALK-AIKTNYPDIQVIILTVHNQHEKVVQAIRDGCSAYVLKDSPPEQLIEVVESV 124 Query: 125 LRGECYFTQKLASYLITHSGN---YRYNSTESALLTHREKEILNKLRIGASNNEIARSLF 181 G + +A+ L+ + R + LLT REKE+L + G SN EIA L Sbjct: 125 AEGRYFVDTSIANELLVNLVQGTPRRQHPKNLPLLTLREKEVLQLIVNGLSNKEIAGKLN 184 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 I+ TVK H+ ++ K+ V +RTQA A Sbjct: 185 ITLRTVKAHVSSILMKLNVNDRTQAAVLAIQ 215 >UniRef50_C3AL44 Response regulator receiver n=3 Tax=Bacillus RepID=C3AL44_BACMY Length = 578 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 85/209 (40%), Gaps = 7/209 (3%) Query: 7 SIHGHTLLLITKSSLQATALLQHLKQ-SLAITGKLHNIQRSLDDI--SSGSIILLDMMEA 63 + +L++ + + +L L + + ++ ++L +++L+D+ Sbjct: 370 AQDKIHILIVDDQPIISDSLEFLLDKYGFRV-SVANSGAQALKQCEERQPNVVLMDIQMP 428 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 I + + + + KI+++ T E+ G E +V ++ Sbjct: 429 KMNGITTMKK-IKNRWPDTKIIMVTTFEETSSVSEAIEAGAEGYVLKSVQPEELVAAIRL 487 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 V G +Q +A+ L LT RE ++L L+ G EIA LF+S Sbjct: 488 VHLGGTMLSQDVATRLFKEYS--PMPKKPPYELTPREMDVLGCLKEGLRYKEIAAKLFLS 545 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 E TV+ + +++ K+ V R +AV A D Sbjct: 546 EGTVRNYASSIYMKLQVSGRGEAVKKALD 574 >UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7V6_ACAM1 Length = 222 Score = 240 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 94/218 (43%), Gaps = 13/218 (5%) Query: 7 SIHGHTLLLITKSSLQATALL--QHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMME 62 S LLL+ +L L L+ + G+ N Q+++D + +I+L+D+ Sbjct: 2 SEQPIHLLLVEDHALMRMGLKGQFSLESDFEVIGEAENGQQAIDLAAQLQPNIVLMDIEL 61 Query: 63 ADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 I + +I++L L+ +G D ++++ ++ Sbjct: 62 PILDGISAT-QKIKATCPDIRVLALSAFGKDNQVVGMLAAGADGYCLKSIDWQQLLAVIR 120 Query: 123 GVLRGECYFTQKLASYLITHSGNYRYNSTESA--------LLTHREKEILNKLRIGASNN 174 + G Y ++A L + + +T A +L+ RE+E+L + G SN Sbjct: 121 LIQGGGTYLDPQIAHKLASMLKSANTPTTAPAHRQTAPATVLSDREREVLQLISEGCSNQ 180 Query: 175 EIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 EIA L++S T+K+++ + K++V +R QA + A Sbjct: 181 EIANQLYLSLGTIKSYVRMILNKLSVDDRVQAAAKAVR 218 >UniRef50_C7R398 Two component transcriptional regulator, LuxR family n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R398_JONDD Length = 230 Score = 240 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 80/210 (38%), Gaps = 11/210 (5%) Query: 9 HGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDD--ISSGSIILLDMMEAD 64 ++++ +L L L + + + + + ++ ++L+D+ Sbjct: 7 TQRRIIIVDDDALVRAGLRMILGGDPGITVVAEGTHGEEAVSLYAAHQPDVVLMDIRMPV 66 Query: 65 KKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGV 124 + + +D + + + +L+L T + + G +V + Sbjct: 67 RDGLSATKD-IVTRWPHANVLVLTTFDTDEFIVKALRAGARGFLLKDTSPPDLVRAVNLA 125 Query: 125 LRGECYFTQKLASYLITHS------GNYRYNSTESALLTHREKEILNKLRIGASNNEIAR 178 G + + + LI G R LT RE ++ ++ G SN EI++ Sbjct: 126 GDGHPTLSPSVTAQLIAKVSEEPDTGRQRQARRMVEQLTERELDVAQQIAQGKSNQEISQ 185 Query: 179 SLFISENTVKTHLYNLFKKIAVKNRTQAVS 208 +L++S TVKTH+ +F K V NR Q Sbjct: 186 TLYMSIPTVKTHISRIFTKFDVDNRVQIAI 215 >UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeobacter violaceus RepID=Q7NMF3_GLOVI Length = 212 Score = 240 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 41/207 (19%), Positives = 83/207 (40%), Gaps = 8/207 (3%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 +L++ +L L Q L + G+ + +++L ++L+D+ Sbjct: 3 RILIVEDHALMRIGLRQVLSQTPEYEVAGEAADGEQALALARSLQPDLVLMDLGLPVMSG 62 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMED--QERVVNGLQGVL 125 + L R+ +++L L + ++ +G R++ + V Sbjct: 63 TEVTR-ILKREYPAMRVLALTSHDEDESVFGALAAGADGYCLKATAGIASRLLAAVASVR 121 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 G + +A ++ G + L+ RE E+L + G +N EI R L+I+ Sbjct: 122 DGAAWLDPDIADRVLRDLGRI-PQAGADNPLSEREMEVLKLIADGLTNAEIGRRLYIASG 180 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWAND 212 TV+ H+ N+ K+ V +R QA A Sbjct: 181 TVRVHVSNIIAKLGVNDRVQAAVRALR 207 >UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID=Q9RPE7_CORDI Length = 233 Score = 240 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 45/216 (20%), Positives = 87/216 (40%), Gaps = 17/216 (7%) Query: 11 HTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 T+ L+ L L + + + + ++ + +L++ ++ +IL+D+ Sbjct: 2 ITVGLVDDQQLVRAGFRMVLDSQSDITVAWEANDGKEALENAANTPVDVILMDVQMPVMD 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + + + N + +I++L T + Y +G E ++ ++ V Sbjct: 62 GLEATKR-IVATNTDTRIIVLTTFDSENYVVGAVEHGASGFLLKDTAPEDLIAAVRTVGE 120 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESA------------LLTHREKEILNKLRIGASNN 174 + + L + + A LT RE+EIL + +G SN Sbjct: 121 QSAVISPAATAVLFKSMRGHAPQTDLVATPGGDINAGLIDPLTPREQEILLLIALGKSNT 180 Query: 175 EIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 EIA LFIS TVKTH+ + K ++R AV +A Sbjct: 181 EIAEELFISLPTVKTHVSKVLSKTGSRDRVHAVLFA 216 >UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67JS2_SYMTH Length = 211 Score = 240 bits (614), Expect = 3e-62, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 83/209 (39%), Gaps = 5/209 (2%) Query: 10 GHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADK 65 +L++ L L L ++ + + G+ + ++ +++LD D Sbjct: 2 PIRVLIVDDHELLREGLKSLLSREEDMEVVGEAAGGREAVALCRSLRPDVVVLDARLPDV 61 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 + + L + + +L+L T D G + ++ V Sbjct: 62 DGVEVCRQ-LQEEMPEVAVLMLTTFSDSDLVLGAVRAGARGYVVKDVLGMDLKRSIRAVA 120 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 RGE K+ YL+ + + E L ++ I+ + G +N EIA +F+SE Sbjct: 121 RGEVAMDPKVVGYLMQQMRSPSADKEERIPLNRQQLAIIRLVAQGYTNREIAERMFLSEK 180 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 TVK +L +++ VKNR +A A+ N Sbjct: 181 TVKGYLAEAMRRMGVKNRVEAAMVASKNG 209 >UniRef50_A9U739 Predicted protein n=2 Tax=cellular organisms RepID=A9U739_PHYPA Length = 214 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 5/209 (2%) Query: 8 IHGHTLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEA 63 + +LL L +L + ++ L I G N + ++ ++L+D+ Sbjct: 1 MEKIKVLLADDQELILESLHIVLSMEPDLEIVGLARNGEEAVKGCEQLMPDMVLMDVNMP 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + + + KI++L + ++ Y G + + G++ Sbjct: 61 VMDGVAATA-LIKERMPATKIIMLTSYKEVEYVLAALSHGAEGYLLKAIHPKDLAAGIRV 119 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 V G +Q++AS +I + + LT RE E+L+KL G N EIA +LF+S Sbjct: 120 VQAGGTLISQEMASKMIKNMNSATPAKHNEFGLTAREIEVLHKLAAGLRNQEIAEALFLS 179 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 E TVK ++ ++ K+ VK R +A A D Sbjct: 180 EGTVKNYISTIYSKLNVKGRREATQKARD 208 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 48/212 (22%), Positives = 90/212 (42%), Gaps = 11/212 (5%) Query: 8 IHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEA 63 +L+ + L L + L++ + + +L I+ ++LLD+ Sbjct: 2 SEPIRVLVADDHPIVRQGLKTFLDIQPDLSVVAEARDGDEALALIAAHEPDVVLLDLNMP 61 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 L+ ++ K+++L + + G Y D + + ++ Sbjct: 62 GSDGAKVLTR-LAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIRS 120 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 V G+ F ++ + + A LT RE+E+L + G SN EIA+ L ++ Sbjct: 121 VADGQVIFAREAVTAM------TAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVA 174 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWANDNLR 215 E TVKTHL +LF+K+ V +RTQA +A + Sbjct: 175 EKTVKTHLSSLFRKLGVADRTQAALYAVTHGM 206 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 46/206 (22%), Positives = 90/206 (43%), Gaps = 7/206 (3%) Query: 13 LLLITKSSLQATALLQHLKQS--LAITGKLHNIQRSLDDISS--GSIILLDMMEADKKLI 68 +LL + L L+ + + + N Q+++ II++D+ D I Sbjct: 5 VLLADDHKIVRDGLRTLLETHGSMNVVAEAENGQKTITLARELHPEIIIMDISMPDMNGI 64 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 + ++ IK++ L+ D + +G E +VN +Q VL Sbjct: 65 DATRK-ITSDLPGIKVIALSMHADRHFVIGMLEAGASGYLLKDCAFEELVNAIQTVLSNH 123 Query: 129 CYFTQKLASYLITHSGNYRYNSTE--SALLTHREKEILNKLRIGASNNEIARSLFISENT 186 Y + +A ++ + + ++ S+ LT RE+E+L L G S +IA +L +S T Sbjct: 124 TYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLHVSVKT 183 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWAND 212 V+TH N+ +K+ V + + + +A Sbjct: 184 VETHRRNITQKLGVGSVAELIKYAIR 209 >UniRef50_A8L345 Two component transcriptional regulator, LuxR family n=33 Tax=Bacteria RepID=A8L345_FRASN Length = 249 Score = 240 bits (613), Expect = 4e-62, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 80/216 (37%), Gaps = 14/216 (6%) Query: 11 HTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 +++ + T L L + + + G + +R+++ + L+D+ Sbjct: 23 IRVVVADDQEIVRTGLRMILDAQPGIVVVGVAVDGRRAVELARRLRPDVCLIDIRMPVMD 82 Query: 67 LIHYWQDTLSRKNNNIK----ILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 I L+ + ++++ T + Y G + + + Sbjct: 83 GIQAT---LALAGPGVADPLAVVVITTFDLDEYVYAALRAGARGFLLKDAGPDLLAQAVH 139 Query: 123 GVLRGECYFTQKLASYLITHSGNYRYNS---TESALLTHREKEILNKLRIGASNNEIARS 179 G+ + + L+ LT RE+++L + G +N+EIA Sbjct: 140 AAACGDALIAPNVTARLLATFAGSGPAPVPAQPVEALTDREEQVLATVAGGRTNSEIAAD 199 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLR 215 L IS +TVKTH+ +L K+ +NR + WA R Sbjct: 200 LHISLSTVKTHIASLMAKLGARNRVEIALWAYQTGR 235 >UniRef50_D2PZN7 Two component transcriptional regulator, LuxR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PZN7_9ACTO Length = 242 Score = 239 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 86/220 (39%), Gaps = 10/220 (4%) Query: 3 NEVHSIHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILL 58 ++ + ++L +L A L +A+ G+ + + ++ ++++ Sbjct: 8 DDPDAGRRLRVVLADDQALLRGAFRTLLDSTDDIAVVGEAGDGEEAVALTRRTHPDVVVM 67 Query: 59 DMMEADKKLIHYWQDTLSRKNNNI-KILLLNTPEDYPYRDIENWPHINGVFYSMEDQERV 117 D+ + + + ++L+L T E Y +G D + + Sbjct: 68 DIQMPGMDGLTATAQICADPDLRASRVLILTTYETDEYVAQALRAGASGFIGKGIDADGL 127 Query: 118 VNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESA-----LLTHREKEILNKLRIGAS 172 ++ ++ + G+ + L+ ++ LT RE+E++ + G S Sbjct: 128 IDAVRTIADGDALLSPAATRSLVARFLATPVDTAPRDVERLVALTPREREMVALVATGLS 187 Query: 173 NNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 N EIA +++S TV+ H+ K+ ++R Q V+ A Sbjct: 188 NLEIADRMYVSPFTVRAHVQRAMTKLEARDRAQLVAIAYR 227 >UniRef50_B2JVP2 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JVP2_BURP8 Length = 215 Score = 239 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 5/213 (2%) Query: 8 IHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDI--SSGSIILLDMMEA 63 + HT+LLI +L + Q ++ S +TG+ + Q ++ ++L+D+ Sbjct: 1 MVPHTVLLIDDHALFRKGVAQLIQMNPSFEVTGEATSGQDGIEMAVRLKPDVVLIDLNMP 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 I + + + + + ++L ++ +G D E + LQ Sbjct: 61 RMNGIETL-EGMRQAGVDARFIMLTVSDNERDVVAALRAGAHGYLLKDMDPEDLCVSLQK 119 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 L+G ++ + L+ + LT RE E+ + L G N IAR L IS Sbjct: 120 ALKGTAVLSESVTGSLVHALSGGQRIPAAQNDLTARELEVFDYLVAGLCNKAIARKLDIS 179 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR 216 TVK H+ ++ +K+ + +R +AV W ++ R Sbjct: 180 VGTVKVHVKHVLRKLDLHSRLEAVLWQQEHGSR 212 >UniRef50_Q024A4 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q024A4_SOLUE Length = 225 Score = 239 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 39/206 (18%), Positives = 78/206 (37%), Gaps = 13/206 (6%) Query: 11 HTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 +L+ + LL + + + + G+ ++ +IL+D+ Sbjct: 23 IRVLIADDHPVVCLGLLGIINGQPDMTVVGQAKTGTEAVALARKHSPDVILMDLRMPGMS 82 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + + + + +++L T + +++ ++ V Sbjct: 83 GVEAT-EVIRAERPESAVIVLTTYQGDEDIRKALAAGAQSYLLKGMSHLKLLEAIRSVRT 141 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 G YF + + N A L+ RE +IL + G SN EIA +L I+ T Sbjct: 142 GHTYFPRAI--------RNSVPGKLNRAALSPREMDILRLIVRGLSNQEIADALNITRGT 193 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWAND 212 VK H+ + +++ V +RTQAV A Sbjct: 194 VKWHVNIILRRLDVNDRTQAVVVAVQ 219 >UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5X6_PELCD Length = 223 Score = 238 bits (610), Expect = 6e-62, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 94/219 (42%), Gaps = 12/219 (5%) Query: 5 VHSIHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDM 60 + + L L T L L + G+ + ++++ I + L+D+ Sbjct: 1 MPKSPPFKVFLADDHPLLRTGLRMSLSRFADIDFIGEASDGFKAVEKIKQNPPDVALIDV 60 Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 I + L ++ ++ +L+L++ D + + +G D + + Sbjct: 61 DMPGLSGIAAVR-MLRKQYPDMTLLILSSYSDKHFIEEAMQAGADGYVLKSIDINELADL 119 Query: 121 LQGVLRGECYFTQKLASYLITHSGNYRYNSTESAL-------LTHREKEILNKLRIGASN 173 ++ GE + L + + + + + LT RE++IL+ L G N Sbjct: 120 IRAFSCGEHPMSPYLMDLAVDWHASEQEEESPADKDDESDAFLTRREQQILSCLAQGQGN 179 Query: 174 NEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 EI+ +LFIS TVKTH+ N+FKK+ VK+R +AV A + Sbjct: 180 KEISNALFISTETVKTHIKNIFKKLEVKSRLEAVIAAKE 218 >UniRef50_D1C3I4 Two component transcriptional regulator, LuxR family n=2 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C3I4_SPHTD Length = 249 Score = 238 bits (610), Expect = 6e-62, Method: Composition-based stats. Identities = 49/226 (21%), Positives = 101/226 (44%), Gaps = 19/226 (8%) Query: 7 SIHGHTLLLITKSSLQATALLQHLKQS--LAITGKLHNIQRSL--DDISSGSIILLDMME 62 S +G T+L++ L L + +++ + + + ++ DI SI L+D+ Sbjct: 7 SGNGRTVLIVDDHPLFRQGLRRLIEEGGAFKVVAEATSGHEAIREADIHRPSIALIDIQL 66 Query: 63 ADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 ++ + L +++ ++ I++L+ D + + + +++ L Sbjct: 67 PGVTGLNVAR-ILKKQHPSMHIIILSMHVDDERLFEAVRAGASAFLTKDIEAQELISSLD 125 Query: 123 GVLRGECYFT------QKLASYLITHSGN--------YRYNSTESALLTHREKEILNKLR 168 V++GE +LA +++ + + L+ RE E+L+ + Sbjct: 126 RVVQGEQLINLEVMSRPELAWRVLSEFRQLTGDDGEAGPASDPKRLPLSVREVEVLDCVA 185 Query: 169 IGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 G SN EIA +LFI+E TVK H+ ++ +K+ V +R QAV A N Sbjct: 186 QGLSNKEIAEALFITEQTVKNHMTSVLRKLQVNDRVQAVLCAVRNG 231 >UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y661_9BACT Length = 216 Score = 238 bits (610), Expect = 7e-62, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 73/208 (35%), Gaps = 7/208 (3%) Query: 11 HTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 +LL + L + L + + G + ++ + L+DM Sbjct: 3 IRVLLADDHEMFLEGLRELLGKADGIELAGLARDGAEAVAAAERLQPDVALMDMTMPRLN 62 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I ++ + K+L+L+ D G + + +Q V Sbjct: 63 GIQAT-QKIAAGSPGTKVLVLSMHGDKNLIVESLKAGARGYVLKECSSQELCLAIQTVAN 121 Query: 127 GECYFTQKLASYLITHSGN--YRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISE 184 G+ Y T + S LI L+ RE ++L L G + +IA L IS+ Sbjct: 122 GQYYLTPAILSTLIGDYLRLTENEEQGSDCPLSERELDVLKLLVKGCNAKQIAEQLSISK 181 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWAND 212 NTV TH ++ K+ + + +A Sbjct: 182 NTVDTHRRHILDKLGCNSMAELTRYAIR 209 >UniRef50_B2JVJ8 Two component transcriptional regulator, LuxR family n=16 Tax=Proteobacteria RepID=B2JVJ8_BURP8 Length = 219 Score = 238 bits (610), Expect = 8e-62, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 5/209 (2%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADKKL 67 T+LLI +L + Q ++ + + G+ + + +D ++L+D+ D Sbjct: 6 TVLLIDDHALFRKGVAQLIQMNPAFRVVGEASSGRVGVDLAVRLKPDVVLIDLNMPDMNG 65 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + + + + L+L ++ +G + E + LQ L+G Sbjct: 66 IETL-EMMRQHGVDARFLMLTVSDNERDVVAALRAGASGYLLKDMEPEELCLNLQKALQG 124 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 ++ + L + + L+ RE+E+L+ L G N EIAR L IS TV Sbjct: 125 TAVLSEAVTGKLFHALSAGQPLPANQSNLSVREQEVLDYLVEGMCNKEIARKLDISVGTV 184 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDNLRR 216 K H+ +L K+ + +R +AV W ++ R Sbjct: 185 KVHVKHLLHKLDLHSRVEAVVWHHEQAAR 213 >UniRef50_C7QC31 Two component transcriptional regulator, LuxR family n=95 Tax=Actinobacteria (class) RepID=C7QC31_CATAD Length = 236 Score = 238 bits (609), Expect = 8e-62, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 83/216 (38%), Gaps = 10/216 (4%) Query: 7 SIHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMME 62 + ++L L L + LA+ G+ ++ ++L+D+ Sbjct: 10 ATEPTRVVLADDQDLVRAGLRLMIDRAPGLAVVGEAATGHDAVRIAREARADVVLMDIRM 69 Query: 63 ADKKLIHYWQDTLSRKNNN-IKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGL 121 + + + + +++L+L T E Y +G + +++ + Sbjct: 70 PGLDGLAATRRIAADDSLAGVRVLILTTFEVDDYVFEALRSGASGFLGKGARPDALIDAI 129 Query: 122 QGVLRGECYFTQKLASYLITHS-----GNYRYNSTESALLTHREKEILNKLRIGASNNEI 176 + V RG+ + LI + S LT RE+E+ + G SN +I Sbjct: 130 RTVARGDALLSPSATRGLIARFLSLQDTEPVHPSPLLTTLTDRERELTALVADGMSNTDI 189 Query: 177 ARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 AR L +S TVKTH+ + K+ ++R Q V A Sbjct: 190 ARQLTLSPLTVKTHVNHAMTKLGARDRAQLVVLAYQ 225 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 238 bits (609), Expect = 8e-62, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 90/208 (43%), Gaps = 9/208 (4%) Query: 11 HTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 + ++ + L+ L I G+ N + +L+ + + I+L+D+ + Sbjct: 1 MRIFIVDDHPIFREGLIARLSMDDDFVIVGQAANGKEALEKMPNLMPDIVLMDISMPEMN 60 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + + K IKIL+L+ +D Y + G + L+ + Sbjct: 61 GMDA-AEIFKDKFPEIKILILSMHDDKEYVLSVLNRGVRGYALKDISAAEMFYALRVIHN 119 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 G Y+++ ++ L+ ++ +LT RE+ +L L G +N E+AR L IS T Sbjct: 120 GGIYYSRAISDLLV----QSSQEPDKNTVLTTREQTVLRLLASGLNNKELARELDISVRT 175 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDNL 214 ++TH N+ K+A+K V +A D+ Sbjct: 176 IETHRRNIKDKLAIKTSAGLVRYAIDHG 203 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 238 bits (609), Expect = 9e-62, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 84/209 (40%), Gaps = 8/209 (3%) Query: 11 HTLLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKK 66 +++L + L L+ + G+ + +++ + +++ D+M Sbjct: 2 ISIVLADDHQIVRHGLKALLEAEADFEVVGEASDGIEAVNLVESLQPGVLVTDLMMGGMS 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I + R + +++L+ + Y E +V ++ ++ Sbjct: 62 GIEVTYQVVKR-SPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREAVQ 120 Query: 127 GECYFTQKLASYLITHSGNYRYNS---TESALLTHREKEILNKLRIGASNNEIARSLFIS 183 G Y + L+ I + LT RE+E+L+ + G + EIA LFIS Sbjct: 121 GHRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLFIS 180 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 TV+ H N+ +K+ ++N+TQ + +A Sbjct: 181 PRTVEVHRANMMRKLDLRNQTQLLRYALQ 209 >UniRef50_C1B8T3 NarL family two-component response regulator n=61 Tax=Bacteria RepID=C1B8T3_RHOOB Length = 276 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 82/201 (40%), Gaps = 12/201 (5%) Query: 11 HTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMME-ADK 65 LLL ++ L L+ + + G+ ++ + ++L+D+ Sbjct: 2 IRLLLADDHAIVRAGLRALLEHEDDIEVVGEAATADAAVALCATTPVDLVLMDLRFGPGT 61 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 + ++ S N +L++ + G ++ ++ Sbjct: 62 SGVDATRNLRSLPNPP-HVLVVTNYDTDADILDAVAAGAAGYLLKDTPPPELLAAVRAAS 120 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 G+ + +AS L+T + L+ RE ++L + G SN EI + LF+SE Sbjct: 121 AGDSVLSPAVASKLMTRVRRPATS------LSPREIQVLTLVAAGRSNREIGKELFLSET 174 Query: 186 TVKTHLYNLFKKIAVKNRTQA 206 TVK+HL ++F K+ VK+RT A Sbjct: 175 TVKSHLVHIFGKLGVKSRTSA 195 >UniRef50_A9U6E4 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6E4_PHYPA Length = 563 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 83/209 (39%), Gaps = 12/209 (5%) Query: 9 HGHTLLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDIS--SGSIILLDMMEAD 64 LL++ + +L L++ + G + +++++ ++L+D+ Sbjct: 356 EVIRLLVVDDHPVIRESLRTLLEEQQDFQVVGTAEDGEQAIELCRQLRPQLVLMDVDMPI 415 Query: 65 KKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGV 124 I + T+ +I+IL+L T ED ++G + ++ V Sbjct: 416 VDGISASR-TIKESWPHIRILILTTFEDTKQALEALRSGVDGYLLKSMQPLELAETIRTV 474 Query: 125 LRGECYFTQKLASYLITHSGNYRYNSTESA-------LLTHREKEILNKLRIGASNNEIA 177 RG Q ++ L S+ LT RE EIL + G IA Sbjct: 475 HRGGTLIEQGMSHKLFAQLEADNSGDDPSSIKASSAYDLTPRELEILQFVSKGLRYKSIA 534 Query: 178 RSLFISENTVKTHLYNLFKKIAVKNRTQA 206 + ++S+ TV+ + + + K+ V+NR +A Sbjct: 535 SNFYLSDGTVRNYASSAYLKLGVRNREEA 563 >UniRef50_B2A6W2 Two component transcriptional regulator, LuxR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W2_NATTJ Length = 215 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 46/209 (22%), Positives = 100/209 (47%), Gaps = 8/209 (3%) Query: 11 HTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 ++L++ ++ L L + + + G++ + +LD ++LLD+ DK+ Sbjct: 3 ISVLVVDDHAVLGKGLSMLLNSQDDMEVCGQVGTAKEALDTCKEKCPDVVLLDLSLPDKQ 62 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 ++ +++ + ++L L ED Y +G + +++ ++ V + Sbjct: 63 GHEIIKEL--KESCSARVLALTMHEDEAYFKRVVEAGGDGYILKKAADDELISAIRSVYQ 120 Query: 127 GECYFTQKLASYLITHSGNY--RYNSTESALLTHREKEILNKLRIGASNNEIARSLFISE 184 GE + LI + N + + ++ L+ REKE+L + +G +N EIA L+IS Sbjct: 121 GEVIVDKTFTKLLIDYYRNPDKQSGTEKNYDLSDREKEVLQLIALGYTNKEIAEKLYISI 180 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 TV+TH+ + +K+ + R++ V +A N Sbjct: 181 KTVETHIARIKEKLGLNRRSELVRYAMRN 209 >UniRef50_C4DM40 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DM40_9ACTO Length = 221 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 45/214 (21%), Positives = 86/214 (40%), Gaps = 9/214 (4%) Query: 8 IHGHTLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEA 63 ++ L++ L AL L + + + + + + +L I S ++LLD+ Sbjct: 1 MNPIRLVVADDQKLIRMALSTLAAGEPDIELVAEAADGKAALTAIRDHSPDVLLLDIRMP 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + + + + ++++++ T + Y G D E +++ ++ Sbjct: 61 IMGGLEVLRHIETDPDATVRVIMMTTFDIDQYVFESLEHGAAGFLTKDTDPEFILHAVRV 120 Query: 124 VLRGECYFTQKLASYLITHSGNYR-----YNSTESALLTHREKEILNKLRIGASNNEIAR 178 V GE + + +I R LT RE EIL + G SN+EIA Sbjct: 121 VAAGESLLSPGVTRRVIDRFTRGRHARTGEPHPGLDSLTARETEILGWVATGLSNDEIAE 180 Query: 179 SLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 L +S TV+TH+ K+ ++R Q V A Sbjct: 181 RLVVSPATVRTHVGRAMMKLRARDRAQLVVIAYR 214 >UniRef50_D2SFS4 Two component transcriptional regulator, LuxR family n=2 Tax=Frankineae RepID=D2SFS4_9ACTO Length = 220 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 97/206 (47%), Gaps = 9/206 (4%) Query: 13 LLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKLI 68 +L++ +L T L L + + G + ++++++ ++L+D+ + Sbjct: 4 VLVVDDHALMRTGLSGLIAAAGDMRVVGTAADGAEAVEEVARLAPHVVLMDLSMPVLDGV 63 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 + + ++ ++++L+L + D G + ++ ++ RG Sbjct: 64 AATRR-IVEEHPSVEVLVLTSFSDRQRVIEALDAGAGGYVLKDTEPADLLAAIRSTARGH 122 Query: 129 CYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVK 188 ++A ++ R + +A LT RE+E+L + G +N +IAR L I E+TVK Sbjct: 123 SPLDPRVARTVLHA----RRSPVRAAELTEREQEVLALVGHGLANKQIARRLGIRESTVK 178 Query: 189 THLYNLFKKIAVKNRTQAVSWANDNL 214 HL ++F++I V++RT A WA +L Sbjct: 179 AHLTSVFQRIGVRDRTSATLWARTHL 204 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 86/217 (39%), Gaps = 6/217 (2%) Query: 1 MFNEVHSIHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSII 56 M V +L+ +L L L + + G+ N + ++D ++ Sbjct: 1 MNASVAPTAPIRVLIADDHALVREGLRYVLDADPGIEVVGEASNGRTAVDLALQHVPDVV 60 Query: 57 LLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQER 116 +LD+ ++ + L + ++LLL+ + Y +G E Sbjct: 61 VLDITMPEESGLKAAAR-LREALPDTRVLLLSMHDQGEYVREGMRIGTHGYLLKDSAGEE 119 Query: 117 VVNGLQGVLRGECYFTQKLASYLIT-HSGNYRYNSTESALLTHREKEILNKLRIGASNNE 175 + ++ V G +F+ + L + + + + LLT RE+++L + G +N Sbjct: 120 LRAAIRAVHAGGTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKA 179 Query: 176 IARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 IA L IS TV+ H +L +K+ + + +A + Sbjct: 180 IAAELGISRRTVEAHRESLMRKLQIHSVAGLTRFALE 216 >UniRef50_A6M052 Two component transcriptional regulator, LuxR family n=8 Tax=Firmicutes RepID=A6M052_CLOB8 Length = 219 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 87/213 (40%), Gaps = 15/213 (7%) Query: 11 HTLLLITKSSLQATALLQHLKQS--LAITGKLHNIQRSLDDIS--SGSIILLDMMEADKK 66 ++L+ + + L ++I + N ++ L + IIL+D+ Sbjct: 2 INVVLVDDQQIVREGIKIILSLDNEISILKEAENGKQLLKILQEIQPDIILMDIRMPFMN 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + + + K NNIK+++L T + Y +G ++ ++ Sbjct: 62 GVEATK-IVKEKYNNIKVIILTTFNEDEYVLQGIRNGADGYILKDARSHDIIKSIKAAYN 120 Query: 127 GECYFTQKLASYLITHSGNYR----------YNSTESALLTHREKEILNKLRIGASNNEI 176 G+ + + LI + + LLT RE ++ + G SN +I Sbjct: 121 GDILLDPAVTTKLIRAFNSISIDKQNSRIINKQKKKLELLTQREMDVAKLVAQGNSNKDI 180 Query: 177 ARSLFISENTVKTHLYNLFKKIAVKNRTQAVSW 209 +LF++E TVK +L N+F+K+ + +RT+ + Sbjct: 181 CHTLFLTEGTVKNYLTNIFEKLELSSRTELALF 213 >UniRef50_B4WJL3 Response regulator receiver domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WJL3_9SYNE Length = 242 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 32/231 (13%) Query: 11 HTLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS------GSIILLDMME 62 +LL+ L L L L+ LAI + N + +LD +++ + L+DM Sbjct: 2 IKILLVEDQKLIREGLNALLSLESDLAIIAEAANGKIALDWLANAKPDQLPELALIDMRM 61 Query: 63 ADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 + +S+ IK+L+L T +D G E + ++ Sbjct: 62 PVMDGV-ATTAMISKHYPAIKVLVLTTFDDDQLIAQSMAVGAQGYLLKDTPSEELAAAIR 120 Query: 123 GVLRGECYFTQKLASYLITHSGNYRYNS-----------------------TESALLTHR 159 V +G F + +I N E A LT R Sbjct: 121 SVAKGYSQFGPGIVQKMIGALPNIAAPPVSRSTRASSALDTSLEANKVDLPPEVAALTPR 180 Query: 160 EKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWA 210 E E+L + GASN EIA+ LF+SE TVK H+ ++ ++ +++RTQA A Sbjct: 181 ETEVLVCIGNGASNKEIAQQLFLSEGTVKNHVTSVLSRLGLRDRTQAALLA 231 >UniRef50_D2B5Y0 Response regulator receiver protein n=14 Tax=Actinobacteria (class) RepID=D2B5Y0_STRRD Length = 227 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 78/210 (37%), Gaps = 11/210 (5%) Query: 13 LLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKLI 68 +L++ L L+ L + + + + + L + ++L+D+ + Sbjct: 11 VLIVDDDPLVRAGLVMMLGGAPDIRVVAQAGDGTQVLPLVDRHAPDVVLMDIRMPVMDGL 70 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 + L + ++++L T + + G + +V ++ V RG Sbjct: 71 AAT-EVLRARPGAPEVIVLTTFDADDHVLRALRAGAAGFLLKDTPPDEIVTAVRQVARGY 129 Query: 129 CYFTQKLASYLITHS------GNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFI 182 + + LI ALL RE+E+ L G SN EI L + Sbjct: 130 PVLSPVVTRRLIARVADSGHDRRRTRAGDRLALLNAREREVAVALGQGRSNAEIGAVLHL 189 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 S TVKTH+ + K+ + NR Q +D Sbjct: 190 SVPTVKTHVSGILTKLGLNNRVQIALLVHD 219 >UniRef50_A9VLR5 Two component transcriptional regulator, LuxR family n=31 Tax=Bacillaceae RepID=A9VLR5_BACWK Length = 595 Score = 237 bits (607), Expect = 1e-61, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 82/210 (39%), Gaps = 8/210 (3%) Query: 10 GHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADK 65 LL++ +L L + L + G + +++D +IL+D+ Sbjct: 382 LIRLLIVDDQPFVRESLRTLLDRYEDLNVVGLAEDGNQAIDLCGRLQPHVILMDLDMQHM 441 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 + + + ++ +I++L+ T +D +G + + N ++ + Sbjct: 442 DGVEATKK-IKQQWPHIRVLIFTTFQDTEQALESLRNGADGFLLKSIETLELANTIRLIH 500 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTESA---LLTHREKEILNKLRIGASNNEIARSLFI 182 +G Q ++ + A LT RE EIL + G IA L++ Sbjct: 501 KGGTLIDQGMSHKIFEKFDEQIETPQSKATAYELTAREIEILQLVAKGLRYTTIASRLYL 560 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 S TV+ + + K+ V+N+ +AV A + Sbjct: 561 SNGTVRNYASTAYTKLGVRNKEEAVQKALE 590 >UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYF0_9SPHI Length = 218 Score = 237 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 87/213 (40%), Gaps = 10/213 (4%) Query: 10 GHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEADK 65 + + L L+ L+ ++ + N + +D + + +IL+D+ Sbjct: 2 PVKVAIADDHVLFRKGLVTILELDDNIEVVYGADNGKELIDKVDAQPPDVILMDLKMPVM 61 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 + + + K +K+L+L+ ++ + NG D + +V+ + V+ Sbjct: 62 DGMEATK-IIKAKYPEVKVLVLSMYDEEKFIIHCLELGANGYLLKNTDPDELVHAIGTVM 120 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTES-----ALLTHREKEILNKLRIGASNNEIARSL 180 + YF +++ ++ + + LT RE+E+L + + E+A L Sbjct: 121 AKDFYFNNHISTVMLKGLNQKKRAKGKPQFENSIELTKREQEVLELICKELTTPEMAEKL 180 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 FIS TV+ H NL +K KN V +A N Sbjct: 181 FISNRTVEGHRKNLLEKTGAKNTAGLVVFALKN 213 >UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 Tax=Bacillales RepID=C0Z7M8_BREBN Length = 602 Score = 237 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 86/218 (39%), Gaps = 16/218 (7%) Query: 5 VHSIHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDM 60 + L+++ S +L L+ + L + G + ++++ ++L+D+ Sbjct: 377 ESADEIIRLVIVDDHSFIRESLRSILEGQRDLRVVGLAEDGAQAVELCEELEPDLVLMDL 436 Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 + I + + K I+IL+L+T +D +G + + Sbjct: 437 EMPNMDGITATKR-IKEKWPGIRILVLSTFQDTEKAKEIMRSGADGYLLKSIESRELAET 495 Query: 121 LQGVLRGECYFTQKLASYLITH-----------SGNYRYNSTESALLTHREKEILNKLRI 169 ++ V RG Q L ++ + + LT RE+EIL L Sbjct: 496 IRLVHRGGTMIAQDLFHKMLDGQPVNGQEDLLVAPKQSEKDENAYGLTKREQEILQMLAQ 555 Query: 170 GASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAV 207 G IA L++S+ TV+ + L+ K+ V+NR AV Sbjct: 556 GMRYKTIASKLYLSDGTVRNYASALYDKLGVRNRDDAV 593 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 43/213 (20%), Positives = 91/213 (42%), Gaps = 9/213 (4%) Query: 10 GHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADK 65 ++L ++ L L + L + G+ + + ++D + ++LLD+ Sbjct: 4 KLRIVLADDHAVLRAGLKVLLNAEPDLEVIGEASDGEEAIDRVDDLHPDLVLLDLTMPKL 63 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 + ++ L + ++KIL+L +D Y G +++ ++ V Sbjct: 64 NGVDCIEELLKKHA-DLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIRTVA 122 Query: 126 RGECYFTQKLASYLITHS----GNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLF 181 RGE + +A+ + S + L+ RE E+L L +G +N +IA L Sbjct: 123 RGEMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIADLLH 182 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 +S TV+T+ + +K+ + R + V +A +N Sbjct: 183 VSVKTVETYKARVMEKLEMHKRAELVRYAMENG 215 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 83/210 (39%), Gaps = 8/210 (3%) Query: 7 SIHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMME 62 + +LL+ L L L + I + + + ++LLD+ Sbjct: 2 TESNIRILLVDDHPLFRRGLSFLLAQEYGFEIVAEATDGLEGVKLARFHRPDLVLLDVEM 61 Query: 63 ADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 L + +L+L ED G D + +V ++ Sbjct: 62 PVMNGPEALAQML-DFQPGLPVLMLTISEDADNLKKCLELGARGYILKNADTDFLVEAIR 120 Query: 123 GVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFI 182 + G+ + ++ + +S LT RE+++L + G SN IAR +F+ Sbjct: 121 QAVAGQQTVSPEMNN---AGQSIPPEHSAILDSLTQRERDVLRYVAGGISNKMIARRMFL 177 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 SENTVK H+ N+F+K+ + NR +A +A + Sbjct: 178 SENTVKAHMQNIFRKLNIDNRVRAAVYARE 207 >UniRef50_C1YGP4 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1YGP4_NOCDA Length = 225 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 92/222 (41%), Gaps = 18/222 (8%) Query: 8 IHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS----GSIILLDMM 61 + ++L++ L L + L+ + + + G + +L+ +S+ + L+D Sbjct: 1 MTTVSVLIVDDQILMRQGLRKLLEIEEGVDVVGDAADGVEALEFLSAADPLPDVALVDAR 60 Query: 62 EADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGL 121 + + + ++ L+L T +D G E +V + Sbjct: 61 MPRMDGVALIGR-MRAEYPDVPALVLTTFDDDELVFGGLRAGARGYLLKDVPPEELVAAI 119 Query: 122 QGVLRGECYFTQKLASYLITHSGN-----------YRYNSTESALLTHREKEILNKLRIG 170 + V RGE A L+ G E+ L+ RE+E+ + G Sbjct: 120 RRVARGETVLGGPAAELLVAALGEGPSTVPAADPPRPPGHGEAPRLSEREEEVARLVGTG 179 Query: 171 ASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 A+N E+AR+LFI+E T K H+ ++ +K+ +++RT+ W + Sbjct: 180 ATNREVARALFITEGTAKNHVTSILRKLGLRDRTRLALWVRE 221 >UniRef50_C0GHS5 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHS5_9FIRM Length = 219 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 92/210 (43%), Gaps = 7/210 (3%) Query: 8 IHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEA 63 + + ++ + L + L I G+ + + ++ + ++LLD+ Sbjct: 1 MEKIKIFIVDDHEVVRLGLQGLFARYEELEIVGEAASGEEAVQVVPVIKPDVVLLDVRLQ 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + ++ IK+++L++ + + V+ ++ Sbjct: 61 GIHGADTCR-LITSAVPGIKVVMLSSFAEPEEVQAAFTAGASAYVLKNITSGNVIKAIKA 119 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 V++GE + ++ +++ + S + + L+ RE+EIL+ + G +N EI R LF+S Sbjct: 120 VMQGESFIDPEITEQVMSLIRGEKAAS-QISGLSKREEEILHLVGEGKTNKEIGRELFLS 178 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSW-AND 212 E TV+ H+ + K+ V NR+QA ++ A Sbjct: 179 EKTVRNHVSRILDKLGVSNRSQAAAFMARR 208 >UniRef50_Q5WJ71 Two-component response regulator n=5 Tax=Bacillaceae RepID=Q5WJ71_BACSK Length = 210 Score = 237 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 8/209 (3%) Query: 11 HTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISSG--SIILLDMMEADKK 66 T+LL + L ++ Q + + N Q ++D ++L+D+ Sbjct: 2 KTILLAEDQQIVRQGLKMMIEHRQRYQVI-EAENGQEAVDLAGRHVIDLVLMDVRMPVMT 60 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I + + ++ N+KI++L T D Y G D E + ++ L Sbjct: 61 GIEATKRLI-ERDPNVKIVMLTTFIDERYAIEALKAGAKGYILKDADMESLFATIEKALL 119 Query: 127 GECYFTQKLASYLITHSGNYRYNSTES--ALLTHREKEILNKLRIGASNNEIARSLFISE 184 GE ++A+ ++ + + L REKEI+ + G +N EIA L++S Sbjct: 120 GELVLDGQVAAKVMPKLLQHSAPQEKEQIPPLAEREKEIIRLVGQGRNNAEIAAELYLSV 179 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 TVK ++ LF K+ V++RTQ +A + Sbjct: 180 GTVKNYISQLFIKLGVRDRTQLAIFAVKH 208 >UniRef50_C6XAG0 Two component transcriptional regulator, LuxR family n=2 Tax=Proteobacteria RepID=C6XAG0_METSD Length = 232 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 80/209 (38%), Gaps = 5/209 (2%) Query: 9 HGHTLLLITKSSLQATALLQHLKQS--LAITGKLHNIQRSLDDIS--SGSIILLDMMEAD 64 + LI +L + Q ++ + G+ + L ++L+D+ Sbjct: 22 SPTKVFLIDDHALFRKGVGQMIEADPAFRVVGEAASGSEGLLLAPPLQPDVVLIDLNMKG 81 Query: 65 KKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGV 124 I + + + + ++L + +G + E + L+ V Sbjct: 82 LNGIETLRRFKTESSLQARFVVLTVSDAEDDLLEALRAGADGYLLKDMEPEDLCASLKKV 141 Query: 125 LRGECYFTQKLASYLITHSGNYR-YNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 + G L L R + + LT RE+EIL L G +N IAR L IS Sbjct: 142 ISGMTVIQDSLTEVLKQALLEPRTRKADDDVALTDREQEILQCLADGLNNKTIARKLGIS 201 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 + TVK H+ +L K+ + +R +A WA+ Sbjct: 202 DTTVKVHIKHLLSKLKLTSRLEAAVWAHR 230 >UniRef50_B9XC41 Two component transcriptional regulator, LuxR family n=7 Tax=Verrucomicrobia RepID=B9XC41_9BACT Length = 267 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 78/212 (36%), Gaps = 8/212 (3%) Query: 7 SIHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMME 62 S+ +LL ++ L L ++ + I G+ + ++ +IL+D+ Sbjct: 27 SMPNIRVLLADDHTVVRQGLRALLSGEKDIQIVGEAGTGREAVQMAQKLTPDVILMDIAM 86 Query: 63 ADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 + + ++ + K+L+L++ + Y +G +V ++ Sbjct: 87 PLMNGLEATRK-IAEVAPSAKVLVLSSYGEDDYVQKLTEAGASGYLIKHAAANDLVAAVR 145 Query: 123 GVLRGECYFTQKLASYLITHSGNYRYNSTESA---LLTHREKEILNKLRIGASNNEIARS 179 +G +F+ +A L N + LT RE E L + G N IA Sbjct: 146 ETHKGNAFFSPGIAKRLRDQVRAGFANGNGTKASFELTERELETLGHIVAGKPNKVIACD 205 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWAN 211 + IS TV+ H + K+ + +A Sbjct: 206 MGISIKTVEKHRQQVMNKLNIHEVASLTRYAI 237 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 236 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 82/208 (39%), Gaps = 7/208 (3%) Query: 11 HTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKK 66 ++++ S+ + L+ L++ + N +++ + + + ++L+DM Sbjct: 2 IKVMVVDDHSIVREGIRILLERFPDLSVVAEADNGRKASELAADLAPHVVLMDMTMPGLN 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I Q L+ +++L+L+ +D + G +V ++ V Sbjct: 62 GIDATQRLLAA-CPEVRVLILSMHKDKRFVSQAFRAGARGYLLKDCASAELVQAVRQVAC 120 Query: 127 GECYFTQKLASYLITHSGNYRYNS--TESALLTHREKEILNKLRIGASNNEIARSLFISE 184 GE Y + ++ S LT RE+E+L + G + A L I+ Sbjct: 121 GEMYVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQLNINV 180 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWAND 212 TV TH + KK+ +++ + +A Sbjct: 181 KTVDTHRQQIMKKLKMRSVAELTKYAIR 208 >UniRef50_B9XAM6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=B9XAM6_9BACT Length = 209 Score = 236 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 88/212 (41%), Gaps = 13/212 (6%) Query: 5 VHSIHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDM 60 + +L+ + L+ + + + + + + ++L+ + + L+D+ Sbjct: 1 MKKEGKIRILIADDHYVVRMGLIALVNTEPDMEVVAEAADGAQALELFAKCNPDLALMDL 60 Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 K + + + + +L+L + G E+++ Sbjct: 61 RMPVKSGVQATLE-IRNRFATACVLMLTAFDGDEDIHKALQAGAQGYVLKSSTGEKLIPA 119 Query: 121 LQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL 180 L+ V G+ + +++A+ L L+ RE ++L++L G +N EIA L Sbjct: 120 LRAVAAGQRWIPKEVANRLALR--------NSFEQLSPREVQVLSELARGLANKEIADVL 171 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 I+E+T K HL ++ K+ V +RT+AV+ A Sbjct: 172 NITEHTTKDHLKSILAKLRVADRTEAVTVALQ 203 >UniRef50_A4FB05 Two component system response regulator n=43 Tax=Bacteria RepID=A4FB05_SACEN Length = 235 Score = 236 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 95/212 (44%), Gaps = 6/212 (2%) Query: 7 SIHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDI--SSGSIILLDMME 62 T+++ ++ L+ L + L + + + Q ++ + ++L+D+ Sbjct: 2 QPSDTTIVVADDQAMIRAGLVALLSAEPDLRVLAEAADGQAAVAAVQRRRPDVVLMDVRM 61 Query: 63 ADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 I ++ + + +++L + Y +G E +V + Sbjct: 62 PGVDGITAAREIVDITDGQTSVIMLTVHDLDEYVYAALRAGASGFLLKDAPPEELVRAVH 121 Query: 123 GVLRGECYFTQKLASYLITHSGNY--RYNSTESALLTHREKEILNKLRIGASNNEIARSL 180 V G+ ++ L+ + R TE + LT RE+++L ++ G SN EIAR+L Sbjct: 122 TVAAGDALLAPRVTRRLLQRFASLGVRDAGTELSGLTDRERDVLLEVAKGGSNAEIARNL 181 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 ++E TVK+HLY++ +K+ + +RTQ V A + Sbjct: 182 GLAELTVKSHLYHVMQKLHLNSRTQLVITAYE 213 >UniRef50_C6CWJ3 Two component transcriptional regulator, LuxR family n=4 Tax=Bacillales RepID=C6CWJ3_PAESJ Length = 235 Score = 236 bits (603), Expect = 4e-61, Method: Composition-based stats. Identities = 44/223 (19%), Positives = 89/223 (39%), Gaps = 22/223 (9%) Query: 11 HTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 + L+ + + + + G+ + + ++ I ++L+D+ Sbjct: 8 IRVFLVDDHPHGREGMREIIGADPEFMVVGEAASGEEAIARIDDVLPDLVLMDINMPGMG 67 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + Q L ++KI+++ +D + G + L+ V+ Sbjct: 68 GLEATQQ-LKYLYPSLKIVMVTVSDDITHLFEAIKRGAQGYLFKNLSPSAWREYLRAVVD 126 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESA-----------------LLTHREKEILNKLRI 169 E ++++A L+ + N + A LT REK+IL ++ Sbjct: 127 DEAPMSKEIAFRLLQEFTSAASNGIKPAKTGSKPGHAGDASAMTTPLTAREKDILERVVT 186 Query: 170 GASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 G SN EIA + +SE+TVK HL N+ +K+ + NR Q +A + Sbjct: 187 GESNKEIAVAFGLSEHTVKNHLKNILQKLHLDNRVQLTRYAYE 229 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 236 bits (603), Expect = 5e-61, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 80/206 (38%), Gaps = 8/206 (3%) Query: 13 LLLITKSSLQATALLQHLKQSLA--ITGKLHNIQRSLDDISS--GSIILLDMMEADKKLI 68 ++L+ L + L++ + G+ N ++ I+L+D+ I Sbjct: 5 IVLVDDHKLVRDGVRMILERGSEFLVVGEAENGADAVQLCKKSSPDIVLMDIGLPGMNGI 64 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 + L ++K+++L+ +D +++ L+ V RG Sbjct: 65 EATTELLRH-CPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTVARGG 123 Query: 129 CYFTQKLASYLITHSGN---YRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 Y + +++ L+ ++ + L+ RE ++L + G ++ +IA L + Sbjct: 124 SYLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLDLGLQ 183 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWAN 211 TV+++ + KK+ V N A Sbjct: 184 TVRSYRKTMMKKLGVNNVAGLTQLAL 209 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 235 bits (602), Expect = 6e-61, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 83/205 (40%), Gaps = 5/205 (2%) Query: 11 HTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQR--SLDDISSGSIILLDMMEADKK 66 +LL + AL L L + + + + ++ D ++ +D+ Sbjct: 3 LRILLADDHQMFRHALRALLARDPELEVVAEAASGEEVLAIADAQPVDLVCMDIAMPGMD 62 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I + L+R + ++++ L+ D + G E + ++ ++ V Sbjct: 63 GIEATRRLLAR-HPALRVIGLSAFADRQFVTDLLAAGARGYITKGEAGDELLRAIRTVCE 121 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 G Y ++A+ + + + LT RE+++L + G ++ +I L I+ +T Sbjct: 122 GRSYLCPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRLHIAAST 181 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWAN 211 V+ H NL +K+ + N + +A Sbjct: 182 VEVHRRNLMRKLDLHNVAELTRYAI 206 >UniRef50_B1VF85 Two-component system response regulator n=3 Tax=Corynebacterium RepID=B1VF85_CORU7 Length = 264 Score = 235 bits (602), Expect = 6e-61, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 82/250 (32%), Gaps = 47/250 (18%) Query: 11 HTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRS--LDDISSGSIILLDMMEADKK 66 T+ L L L + L++ + + + L +IL+D+ Sbjct: 2 ITVGLADDQQLVRAGFAMVLDSQDDLSVAWEAADGAEACELAVALPVDMILMDVQMPTMD 61 Query: 67 LIHYWQDTLSRKNN------NIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 I + L+ + ++++L T + Y +G D E ++N Sbjct: 62 GIAATRRILNELSPTGPAGEPTRVVVLTTFDSDNYVLGAVTAGASGFLLKDADPEELINA 121 Query: 121 LQGVLRGECYFTQKLASYLITHSGNYRYNSTES--------------------------- 153 ++ V + + LI + Sbjct: 122 VRTVGESTAVISPAATAKLIQRLRADGAAANPEGPKSTPAPGVPPQNTAAPQPAAARPAT 181 Query: 154 ----------ALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNR 203 LT RE+EIL + G SN EIA LFIS TVKTH+ + K ++R Sbjct: 182 PDAEDDLGLVDPLTRREREILCLIAKGQSNQEIAEKLFISLPTVKTHVGRVLMKTGSRDR 241 Query: 204 TQAVSWANDN 213 AV +A + Sbjct: 242 VHAVLFALKH 251 >UniRef50_C5C4U8 Two component transcriptional regulator, LuxR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C4U8_BEUC1 Length = 216 Score = 235 bits (602), Expect = 6e-61, Method: Composition-based stats. Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 6/215 (2%) Query: 5 VHSIHGHTLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSL--DDISSGSIILLDM 60 + + +L+ L +AL + ++ + + G + + + ++ S + LLD+ Sbjct: 1 MAADDVIRVLVADDQELMRSALGTVIDVQPDMRLVGSVPSGEDAVREALAVSVDVALLDI 60 Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 A I + + R + ++L+L T + Y +G V Sbjct: 61 RMARMDGIEACAE-IRRHRPDTRVLMLTTFDLDEYLFRSVAAGASGFLTKDTPGADVAGA 119 Query: 121 LQGVLRGECYFTQKLASYLITHSGNYRYNSTESA-LLTHREKEILNKLRIGASNNEIARS 179 ++ V G + + LI ++ A L+ RE+++L L G SN EIAR Sbjct: 120 IREVHSGRSVVSPRATRALIDRIARAAPDAAAVAADLSPRERDVLALLARGFSNAEIARE 179 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 LF++E+TVKTH+ +L +K+ V++R V WA N Sbjct: 180 LFVAESTVKTHVSSLTRKVGVRDRLHVVVWAYRNG 214 >UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFI8_DESAH Length = 220 Score = 235 bits (602), Expect = 6e-61, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 77/208 (37%), Gaps = 6/208 (2%) Query: 10 GHTLLLITKSSLQATALLQHLK-QSLAITGKLHNIQRS--LDDISSGSIILLDMMEADKK 66 +L+ ++ L L+ + L + N +++ L I+++D+ + Sbjct: 2 PPRILIADDHAIVREGLRVLLERKGLEVPWMAENGRQAVCLAVKFKPDIVIMDITMPNMN 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + + + +++ L+ D Y D + + +Q V R Sbjct: 62 GSIAT-EKIMQALPRTRVIALSMHADRRYIDRMFNAGAIAYVLKDSAFAELFDAIQAVGR 120 Query: 127 GECYFTQKLASYLITHSGNYRYNST--ESALLTHREKEILNKLRIGASNNEIARSLFISE 184 G+ Y + +A L + ++ RE+E+L + G +IA LF+S Sbjct: 121 GKYYISPSIAKTLADSCTSAPDTPQKCPFGRISPREREVLQLIAEGVKTRQIAERLFVSI 180 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWAND 212 TV+ H N+ K+ + + +A Sbjct: 181 KTVEAHRRNIMNKLMISSVAGLTRFAIQ 208 >UniRef50_C1TRD8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRD8_9BACT Length = 222 Score = 235 bits (601), Expect = 8e-61, Method: Composition-based stats. Identities = 41/206 (19%), Positives = 86/206 (41%), Gaps = 5/206 (2%) Query: 11 HTLLLITKSSLQATALL--QHLKQSLAITGKLHNIQRSLDDISSGS--IILLDMMEADKK 66 +L++ ++ T ++ L+ + + G+ + +L+ + + L+D+ Sbjct: 5 IRVLVVDDHAIFRTGVINTLSLEDDIEVVGEAGDGLEALEFMKKVDFDVALVDVTMPRMG 64 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + + ++ L ED + + G + +++ ++ V Sbjct: 65 GVELVSK-MEETGMARSVIALTALEDDRDMVFLSKAGVKGFVLKTSGFDELISAIRTVSG 123 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 G+ Y + A L+ + L+ RE E+L L G + EIA L +S+ T Sbjct: 124 GDNYVDSRAAGKLLNCFSEDTSRERGMSRLSERELEVLYWLAQGLNGQEIAERLSLSDKT 183 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWAND 212 VK H+ ++ K+ V +RTQAV+WA Sbjct: 184 VKNHISHILAKLKVSDRTQAVAWAWR 209 >UniRef50_A9B4P1 Two component transcriptional regulator, LuxR family n=11 Tax=Bacteria RepID=A9B4P1_HERA2 Length = 257 Score = 235 bits (601), Expect = 8e-61, Method: Composition-based stats. Identities = 46/219 (21%), Positives = 96/219 (43%), Gaps = 19/219 (8%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADKKL 67 +L++ L + L ++ + I G+ + + L I ++L D+ + Sbjct: 6 KVLMVDDHPLFRQGVRWALSSERDIKIIGEGSSAEEGLVLISEHEPDVVLTDLNLPNMDG 65 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + + T+ R+ NI +++L+ E + + + + L+ V RG Sbjct: 66 LEFTR-TIRRQYPNIGVVMLSVYESDEHAFNALRAGAAAYYSKEISPKTLATVLRRVARG 124 Query: 128 ECYF------TQKLASYLITHSG--------NYRYNSTESALLTHREKEILNKLRIGASN 173 E ++A ++T + + + L+ RE E+L + GA+N Sbjct: 125 EYVINDVMFEDPRVADRILTQFRGLQTGIVAEPDLDISLFSPLSDREIEVLEHIASGATN 184 Query: 174 NEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 +IA +L IS TVK H+ ++ +K+++ +RTQAV +A Sbjct: 185 KDIADALKISTQTVKNHISSILRKLSLNDRTQAVLYALR 223 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 88/209 (42%), Gaps = 9/209 (4%) Query: 10 GHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADK 65 ++ ++ + L L + I G + +L+ +IL+D+ Sbjct: 8 PVSVQIVDDHPMVQGGLKACLSFYDDIIIVGSTDDGSDALNKAIELKPDVILMDISMPTM 67 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 I + ++ + K+L+L+ + + G E + ++ V Sbjct: 68 NGIDAT-EIITEQLPETKVLILSMHSNPEFVKSAIQAGAVGYLLKDTTSEEIYYAIKAVA 126 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 G+ +F+ +A LI + N+ ES LT RE+ +L+ L G ++ EIA+ L IS Sbjct: 127 NGKTHFSSSIAKLLIDN----PVNTNESEKLTTREQVVLSYLAKGKTSKEIAKILNISFR 182 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 TV+ H N+ K+ + + + +S+A + Sbjct: 183 TVEAHRRNMKTKLGIHSLAKLISYAVKHG 211 >UniRef50_C7MXL4 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=3 Tax=Actinomycetales RepID=C7MXL4_SACVD Length = 239 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 89/210 (42%), Gaps = 6/210 (2%) Query: 11 HTLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 ++ L+ + L L + + I G+ + +L I + +LD+ D Sbjct: 3 ISVFLVDDHEIVRRGLTDLLEAEPDMRIVGEAASAGEALARIPGTGADVAVLDVRLPDGN 62 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + ++ LS ++ L+L + D +G +V+ ++ V Sbjct: 63 GVELCRELLS-TVPGLRCLMLTSYADDEALFNAIMAGASGFVLKQVLGSDLVSAVRTVGS 121 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 G K S L+ R S + L+ +E+ +L+ + G +N EIA L+++E T Sbjct: 122 GGSLLDSKTTSALMNRIRREREESDPVSGLSEQERAVLDLIGEGLTNREIAARLYLAEKT 181 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDNLRR 216 VK ++ L K+ ++ RTQA A + LR+ Sbjct: 182 VKNYVSRLLGKLGMQRRTQAAVLATE-LRK 210 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 81/209 (38%), Gaps = 7/209 (3%) Query: 8 IHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEA 63 +LL +L + L + + G+ N + ++ ++L+D+ Sbjct: 2 TKPIRVLLADDHALVRDGIRARLNKVPEIEVVGEATNGREAVKLAHELRPDVLLMDVSMP 61 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + + + I +L+L+ ++ Y G ++ + Sbjct: 62 VMNGLEAAAEV-RKSFPEIAVLILSIYDNSEYVRGVVQAGARGYILKDISAPEMITAISS 120 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 V G YF+ + L+ + + LT RE+++L + G N E+A+SL IS Sbjct: 121 VASGGYYFSSAVGPTLVGTAT--SAPIEDPYGLTDRERQVLTAIAKGLPNKEVAKSLGIS 178 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 TV++H NL +K+ KN Q A D Sbjct: 179 VRTVESHRLNLREKVGNKNAAQLYKVAQD 207 >UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D2Q2Q8_9ACTO Length = 216 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 81/210 (38%), Gaps = 8/210 (3%) Query: 11 HTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKK 66 +L++ L L + L + G+ + + +L ++L+D+ Sbjct: 2 IRVLVVDDQDLVRAGLRLLIDNTDDLRVVGEASDGREALALAREHQPDVVLMDLQMPVMG 61 Query: 67 LIHYWQDTLSR-KNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 + + + +++L T + +G + + ++ + Sbjct: 62 GVETTAAIRADPLLKDTPVVVLTTFDHDADVVDAVQAGASGYLLKDLAADELRGAIRTAV 121 Query: 126 RGECYFTQKLASYLITHSGN---YRYNSTESALLTHREKEILNKLRIGASNNEIARSLFI 182 G K+A ++ + A LT RE +IL + G SN EI ++LF+ Sbjct: 122 TGGAPIAPKVAKLMMHRISRMPSRKVQEETLAGLTARELDILAHVGRGLSNEEIGQALFL 181 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 S T +T++ L K+ V++R+Q V A+ Sbjct: 182 SPETARTYVSRLLAKLGVRDRSQLVVLAHK 211 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 41/203 (20%), Positives = 84/203 (41%), Gaps = 11/203 (5%) Query: 13 LLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKLI 68 +L++ +L + L+ + + G + + +L ++ ++L+D+ I Sbjct: 8 VLVVDDHTLHRDGTRRILEQYDDVDVVGDAASGEDALAMVNRLHPRVVLMDIRLPGMNGI 67 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 + + ++ + ++L++ +D Y G +V ++ V G Sbjct: 68 EATRR-IRERHPDTRVLIVTAYDDEEYVRGAFDVGAAGYLSKTAPGRELVEAVRAVAGGN 126 Query: 129 CYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVK 188 L + L+ S+ + LT RE+ +L L G N +IA L IS TV+ Sbjct: 127 SVLQPTLMAALL------AKRSSPANTLTDRERAVLRLLAEGMHNKQIASRLGISARTVE 180 Query: 189 THLYNLFKKIAVKNRTQAVSWAN 211 H ++ K+ V +RT+AV A Sbjct: 181 RHCDRIYGKLGVTSRTEAVVRAI 203 >UniRef50_C4RJG1 Two-component system response regulator receiver n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RJG1_9ACTO Length = 264 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 79/210 (37%), Gaps = 6/210 (2%) Query: 8 IHGHTLLLITKSSLQATALLQHLKQSLAI--TGKLHNIQRSLD--DISSGSIILLDMMEA 63 + +L++ + L L+ + + ++ ++ +D+ Sbjct: 51 VERIRVLIVDDHPVVRRGLRTMLEGESWVDGIAEAATCAEAVSSVVADRVGVVAMDVALP 110 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 D + + L + ++L+L +D + G D + +++ L+ Sbjct: 111 DGDGVEATRRILLSR-PETRVLMLTMADDEDVVNRSLRAGARGYVLKDTDPDVIIDALRT 169 Query: 124 VLRGECYFTQKLASYLITHSGNYRYN-STESALLTHREKEILNKLRIGASNNEIARSLFI 182 V G ++ ++T LT RE++IL L G +N IAR + Sbjct: 170 VAGGGLVLGPRVGPQVLTTLQRQPVELPPPFDRLTPRERDILRHLATGETNARIARRFGL 229 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 SE TV+ L +F K+ V +R QA A D Sbjct: 230 SEKTVRNQLSAVFAKLGVTDRVQAALLARD 259 >UniRef50_C2RNB5 Two-component protein Kinase n=1 Tax=Bacillus cereus BDRD-ST24 RepID=C2RNB5_BACCE Length = 304 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 48/214 (22%), Positives = 91/214 (42%), Gaps = 9/214 (4%) Query: 7 SIHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDI--SSGSIILLDMME 62 S L ++ S +L L + L + G + +++L+ ++L+D+ Sbjct: 87 SNKQIRLCIVDDHSFIRESLHTILSGLEDLQVVGMAEDGEQALELCGRLKPDVVLMDLEM 146 Query: 63 ADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 + IH + + ++ I++L+L+T ++ +G D + ++ Sbjct: 147 PNLDGIHATK-MIKKRWPEIRVLILSTFQNTERAKEIIRNGADGYVLKSIDSRELAESIR 205 Query: 123 GVLRGECYFTQKLASYLITHSGN----YRYNSTESALLTHREKEILNKLRIGASNNEIAR 178 V RG T L + + + L+ RE EIL L G+ IA Sbjct: 206 LVYRGGAMITHDLFHRMWEENKETGLFESRSDGIEYGLSKRELEILELLSQGSRYKTIAS 265 Query: 179 SLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 +L++S TV+ + NL++K+ VKNR +AV A D Sbjct: 266 TLYLSNGTVRNYASNLYEKLGVKNREEAVQKAKD 299 >UniRef50_UPI00018742FB two component transcriptional regulator, LuxR family n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI00018742FB Length = 235 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 46/233 (19%), Positives = 89/233 (38%), Gaps = 26/233 (11%) Query: 8 IHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISSGSIILLDMMEADK 65 + +L+ +L + Q + + + G + + ++ S ++++D+ Sbjct: 1 MGVIRVLVAEDQALIRQSFAQLIDAHPQMKVIGAVGDGAEAVRLASGADVVVMDIRMPVM 60 Query: 66 KLIHYWQDTL-------SRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVV 118 I + + + ++ K+L+L T + G + ++ Sbjct: 61 DGIEATRQIAQGAPSGGAARASSPKVLVLTTFREEDLVLGALEAGAAGFLLKDSNPRELL 120 Query: 119 NGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESA-----------------LLTHREK 161 + + + RGE K+ ++ H +S A T RE+ Sbjct: 121 SAIMRIHRGEGVIDPKVTPMVLRHVSPRAPHSGRPASASSTHGAGSDPTDAGTQFTPREQ 180 Query: 162 EILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 EILN + G SN+EIAR L ++ TVKTH+ L K ++R V WA N Sbjct: 181 EILNLVCQGLSNDEIARRLVVATTTVKTHVKALLTKTGSRSRVDLVIWAAKNG 233 >UniRef50_A0RGC1 DNA-binding response regulator n=12 Tax=Bacillales RepID=A0RGC1_BACAH Length = 597 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 52/217 (23%), Positives = 90/217 (41%), Gaps = 14/217 (6%) Query: 11 HTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 LL++ +L +L Q L+ + GK ++ +L I+L+D+ + Sbjct: 381 IRLLVVDDQALITNSLEQILENQTDFIVVGKAYDGSEALILCEQLQPDIVLMDIQMPEMN 440 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I + + R+ N+KI+L+ T ED G + + L+ + Sbjct: 441 GIEALLE-MKRRWPNMKIVLMTTFEDSLQAATALEHGAEGYMLKSIHPQEMKEALKLIYN 499 Query: 127 GECYFTQKLASYLITHSGNYRYNSTE--------SALLTHREKEILNKLRIGASNNEIAR 178 G + Q +A+ + R + LT RE EIL L G IA Sbjct: 500 GGTWIDQSVATRIFEEMKLQREQLAKIKSTKQTFPYGLTKREMEILEHLSNGLRYKSIAA 559 Query: 179 SLFISENTVKTHLYNLFKKIAVKNRTQAVSWAN-DNL 214 LF+SE T++ + NL+ K+ V NR +A+ A +N+ Sbjct: 560 KLFLSEGTIRNYCSNLYSKLGVSNREEAIKMARTENI 596 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 233 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 5/208 (2%) Query: 11 HTLLLITKSSLQATALLQHLKQS--LAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 + + +L + + L QS + + G+ N +++ + ++LLD+ K Sbjct: 2 IKIAIADDHALLREGMRRMLSQSELIEVVGEASNGAEAVEVVKEKAPDVLLLDITMPVKD 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I D L N N KIL+L+ D Y NG E ++ + V Sbjct: 62 GIEATADIL-ALNVNTKILILSMHADEQYALRTLRAGANGFISKGARLEELLKAITDVHE 120 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 G+ Y K+A+ L+ RE +++ L G +N EIA L IS T Sbjct: 121 GQRYLPDKIATSFAERHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVLQISVKT 180 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDNL 214 V TH ++ KK+ ++N + +A + Sbjct: 181 VDTHRSHVLKKLELRNNSDITRFAIQHG 208 >UniRef50_UPI000050F8A6 two component transcriptional regulator, LuxR family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F8A6 Length = 222 Score = 233 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 80/219 (36%), Gaps = 18/219 (8%) Query: 11 HTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKK 66 +++ SL + L L + I + N +++ S +IL+D+ Sbjct: 3 IRVIIADDESLMRSGLRLLLGAADDIDIIAEAANGAEAIELARELSPDLILMDIRMPVMD 62 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + + +++ + ++L+L + G E +++ ++ Sbjct: 63 GLEATRALMAQTL-HPEVLILTAFGTDEFVLQALRSGAAGYILKDTPPEDLIHAVRAAAN 121 Query: 127 GECYFTQKLASYLITHSGNYRYN-------------STESALLTHREKEILNKLRIGASN 173 G + L+ LT RE+EI + G +N Sbjct: 122 GTRTLSPSAVESLLGRDTTSATGVAGASNWNSVPIGPDPLEPLTTREREIAEAVAQGMTN 181 Query: 174 NEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 ++AR+LF+S TVKTHL +F K+ V R Q N+ Sbjct: 182 AQVARALFVSTATVKTHLARIFYKLDVSTRVQLALLVNE 220 >UniRef50_C5SGD8 Two component transcriptional regulator, LuxR family n=2 Tax=Caulobacteraceae RepID=C5SGD8_9CAUL Length = 218 Score = 233 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 86/212 (40%), Gaps = 5/212 (2%) Query: 7 SIHGHTLLLITKSSLQATALLQHL-KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEA 63 + +L++ +L L L ++ G+ + ++ + ++L+D+ Sbjct: 2 TADPLRILIVDDHALAREGLKAVLTSSGFSVVGEAADGPAAIALTEALCPDVVLMDVRLK 61 Query: 64 D-KKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 + + ++ ++L+L + Y G + + + Sbjct: 62 GDMDGLEATRR-IAALGLAARVLMLTLHDLPAYVREALAAGAAGYVLKDTAIDDLQAAIV 120 Query: 123 GVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFI 182 V +G+ L S + + T + LT RE+EI++ + G +N EI RSL I Sbjct: 121 RVAQGQTALPLDLVSAAMRAPEPVERDPTALSSLTGREREIVHLIAEGMTNKEIGRSLGI 180 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 S TVK H+ L K+ V +RTQA A+ +L Sbjct: 181 SPATVKAHVERLIAKLGVTDRTQAAVLASRHL 212 >UniRef50_B8GUD1 Two component transcriptional regulator, LuxR family n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GUD1_THISH Length = 227 Score = 233 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 51/212 (24%), Positives = 87/212 (41%), Gaps = 7/212 (3%) Query: 11 HTLLLITKSSLQATALLQHL-KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 +LLI +L L + L + + G + + + +D +ILLDM Sbjct: 3 RRVLLIDDHTLFREGLQELLKRHGIDTVGAVGDGETGIDLARDLLPDVILLDMRMPAMNG 62 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 + + L + + I++L T + G + +V+ L+ +L+G Sbjct: 63 LEVLRR-LRQAGLKMPIVMLTTSTEEQDLVECLRNGAQGYLLKEMEPGDLVDALEEILQG 121 Query: 128 ECYFTQKLAS---YLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISE 184 + LA ++ + + LT RE EIL L G SN IAR+L IS+ Sbjct: 122 KTVVAPDLAQLLVRVVQGKSSSANEPSPFDELTPREGEILALLAEGQSNKVIARNLGISD 181 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR 216 TVK H+ + +K+ V +R +A A R Sbjct: 182 GTVKLHVKAILRKLGVHSRVEAAVLAVQQGLR 213 >UniRef50_C8VWU8 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWU8_DESAS Length = 216 Score = 233 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 85/206 (41%), Gaps = 6/206 (2%) Query: 8 IHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEA 63 + +++ +L + L + + + G N Q++++ +S + LLD+ Sbjct: 1 MSKIRVVIADDQNLICDGIRIILDSQPDMEVVGIADNGQKAVEFVSACQPDVALLDISMP 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 I ++ + +L+L T + Y +G E++V ++ Sbjct: 61 VMSGIEALKE-IKVNYPKTVVLMLTTFDPDEYIIGAFRSGADGYLLKDMTAEKLVVAIRN 119 Query: 124 VLRGECYFTQKLASYLITHSGNY-RYNSTESALLTHREKEILNKLRIGASNNEIARSLFI 182 G +AS +I H + NS + LT RE EI + G SN I+ +L I Sbjct: 120 AFNGNVTMPASIASRIIVHIHEDVKKNSLQDYGLTQREIEIAGLMARGFSNELISITLGI 179 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVS 208 S TVK ++ ++ K+ +R +A+ Sbjct: 180 SLGTVKNYISVIYSKLEANSRQEAIL 205 >UniRef50_B4B0U5 Two component transcriptional regulator, LuxR family n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B0U5_9CHRO Length = 224 Score = 233 bits (595), Expect = 4e-60, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 88/221 (39%), Gaps = 11/221 (4%) Query: 2 FNEVHSIHGHTLLLITKSSLQATALLQH--LKQSLAITGKLHNIQRSLDDISS--GSIIL 57 +E ++ +LL+ +L L L + G+ + ++++ IIL Sbjct: 1 MDENKTLTPIRILLVDDHNLMRRGLKGLFALNPDYEVIGEATDGLQAIELQEQLKPDIIL 60 Query: 58 LDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERV 117 +D+ I Q + R + KIL L+ + +G + E + Sbjct: 61 MDIDLPLLDGISATQR-IKRDDTATKILALSAYDHDTQVLGMLASGADGYCLKNIEWEEL 119 Query: 118 VNGLQGVLRGECYFTQKLASYLITHSG------NYRYNSTESALLTHREKEILNKLRIGA 171 + ++ + G Y ++A + +L+ RE+ IL + G Sbjct: 120 LVIIRLISHGGVYLDPRIAHKVSHLLKSGSFAVETNTTPKAVTVLSERERLILKLIAEGF 179 Query: 172 SNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 SN +IA LF+S T+K+++ L K++V +R QA + A Sbjct: 180 SNKKIAEQLFLSPGTIKSYVRMLLNKLSVDDRVQAAAKAVR 220 >UniRef50_D0MHE1 Two component transcriptional regulator, LuxR family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MHE1_RHOM4 Length = 211 Score = 233 bits (595), Expect = 4e-60, Method: Composition-based stats. Identities = 43/207 (20%), Positives = 95/207 (45%), Gaps = 5/207 (2%) Query: 11 HTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 + L+ ++ + L+ ++L + G + + + + +IL+D+ D Sbjct: 2 IRIALVDDEAIVRDTIAFLLETTENLTLVGSFASAREAQQSLPQCAPDVILVDIGLPDAS 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + + L + + + L+L +D + +G + E +++ ++ V + Sbjct: 62 GLTLIR-ALRPQLPHAEFLVLTVFDDNQHILEAIQAGASGYLLKRDLPEHLISAIRIVHQ 120 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 G + + +A + + + LT RE+E+L+ L G SN EIA L++S T Sbjct: 121 GGSWMSAGVARRALELFRHQLAPAAALQQLTPREQEVLHLLARGLSNAEIAERLYLSIET 180 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDN 213 V+TH+ ++++K+ +NR +AVS N Sbjct: 181 VRTHIRHIYRKLQARNRAEAVSRLLQN 207 >UniRef50_C7PPD5 Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PPD5_CHIPD Length = 222 Score = 233 bits (595), Expect = 4e-60, Method: Composition-based stats. Identities = 46/207 (22%), Positives = 94/207 (45%), Gaps = 6/207 (2%) Query: 6 HSIHGHTLLLITKSSLQATA--LLQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMM 61 ++ ++ ++ + TA LL + A G +N + +++ I S +++L+D Sbjct: 11 DNMDIISVAIVEDNHDIRTAMELLINGSDGYACIGAFNNAETAVEQIPSLLPNVVLMDFN 70 Query: 62 EAD-KKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 I L + ++ ++L ED +G +++ Sbjct: 71 LPGGMNGIECIAR-LKGEYPDMHFMMLTVYEDDDKIFQALEAGASGYILKKTPPSELLSA 129 Query: 121 LQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL 180 ++ + G + ++A ++ + + LT REKEIL++L G EIA +L Sbjct: 130 IRDLHEGGSPMSSQIARRVVAYFQKQAKPNPALEALTSREKEILDQLSKGFLYKEIASNL 189 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAV 207 FIS TV+ H++N+++K+ V++RT AV Sbjct: 190 FISIETVRRHVHNIYEKLHVRSRTDAV 216 >UniRef50_C4RJ91 Two-component system response regulator n=2 Tax=Actinomycetales RepID=C4RJ91_9ACTO Length = 232 Score = 233 bits (595), Expect = 4e-60, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 87/216 (40%), Gaps = 15/216 (6%) Query: 11 HTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 L++ L + L + + G+ + ++ + ++L+D+ Sbjct: 2 IRALVVDDQGLVRAGIRVLLDTAPDIEVVGEAADGHNAVRLVERLRPDVVLMDIRMPRVD 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I + L+ +L+L T D G + +++ ++ R Sbjct: 62 GIEATRRLLAAA-PLTNVLILTTFADDDSVYGALSAGAVGYLVKDGEPADMLDAVRRAAR 120 Query: 127 GECYFTQKLASYLITHSGN----------YRYNSTESALLTHREKEILNKLRIGASNNEI 176 GE + + ++ + + ++ A LT RE+++L+ + +G SN EI Sbjct: 121 GEPLLAPSVLARVVDRARRSHAADRNGDIEQPDTAVLAALTARERDVLSLVGVGLSNAEI 180 Query: 177 ARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 AR L + TVKTH+ L +K+ ++NR QA A+ Sbjct: 181 ARDLNVGVTTVKTHIVALLEKLGIRNRVQAGILAHR 216 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 232 bits (594), Expect = 5e-60, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 82/213 (38%), Gaps = 8/213 (3%) Query: 5 VHSIHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDM 60 + +LL + L L ++ ++ + + + +L+ + I LLD+ Sbjct: 2 ENKKEPLRILLADDHRVLRKGLSLLLSSEEDFSVVAEASDGEEALEKAAKTPVDIALLDL 61 Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 + + L +++L+L + Y NG + Sbjct: 62 SMPHMGGLECLRR-LKAMQPAVRVLILTMHSERQYVCECLRAGANGYLCKDTLDAELFRA 120 Query: 121 LQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL 180 L+ V G Y ++ A LI + E A L+ RE+E+L + G S + IA L Sbjct: 121 LRTVAAGGRYLGEREAELLIDGALE---EPEEPAALSTREREVLELIVHGYSLSTIADKL 177 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 ++S TV T+ L +K+ ++ V +A + Sbjct: 178 YLSIKTVSTYKTRLLQKLDCTQNSELVDYALRH 210 >UniRef50_A3WDJ9 Two-component response regulator n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WDJ9_9SPHN Length = 217 Score = 232 bits (594), Expect = 5e-60, Method: Composition-based stats. Identities = 46/209 (22%), Positives = 81/209 (38%), Gaps = 5/209 (2%) Query: 8 IHGHTLLLITKSSLQATALLQHLK-QSLAITGKLHNIQRSLDDISS--GSIILLDMMEA- 63 + +L++ L L L + + G + +++ S +IL+D+ Sbjct: 1 MTAPRILIVDDHQLAREGLRAVLAGDGMEVVGLASTGEEAVELAGSLVPDVILMDVRLGD 60 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + + ++ IK+++L E Y G + + + Sbjct: 61 GIDGLEATRQVVALGLP-IKVVMLTLHEMPGYVREALAAGAAGYVLKDTEIGDLRAAINQ 119 Query: 124 VLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFIS 183 V+ G+ L S + S +LT RE+E++ + G +N EIAR L IS Sbjct: 120 VMAGQSALPLDLVSAAMRAENRPEPKGDLSQILTSREQEVVELVAEGLTNKEIARKLDIS 179 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 TVK H+ L K+ V +RTQA A Sbjct: 180 PATVKVHVERLIGKLGVADRTQAAVMAVK 208 >UniRef50_D1XLE6 Two component transcriptional regulator, LuxR family n=3 Tax=Streptomyces RepID=D1XLE6_9ACTO Length = 231 Score = 232 bits (594), Expect = 5e-60, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 89/217 (41%), Gaps = 12/217 (5%) Query: 10 GHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADK 65 ++L++ + L L + + + G + +++++ + ++L+D+ + Sbjct: 14 PISVLVVDDEPVIRAGLSAILDSQADITVAGTADDGEQAVEACARLRPDVLLMDIRMPRR 73 Query: 66 KLIHYWQDTLSRKNNNI---KILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 + + R ++L+L T + Y D +G E++ ++ Sbjct: 74 DGLWALAELGRRGLLGPGRSRVLMLTTFDLDAYVDDALTAGASGFLLKNSSYEQLTEAVR 133 Query: 123 GVLRGECYFTQKLASYLITHSGNYRYNSTESA-----LLTHREKEILNKLRIGASNNEIA 177 G + + +I + R ++ LT RE ++L +R G SN EIA Sbjct: 134 AAAAGHSALSPAVTRRIIEGHLSGRPRPSDQELARLRDLTEREVDVLRLIRDGLSNAEIA 193 Query: 178 RSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 L +S +TVKTH+ + K ++R QA A + L Sbjct: 194 GELVVSLHTVKTHVSRVLMKTGCQSRAQAAVLARNTL 230 >UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA Length = 212 Score = 232 bits (594), Expect = 5e-60, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 81/207 (39%), Gaps = 5/207 (2%) Query: 11 HTLLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 +LL + L + ++ + + + N + ++D + ++D+ Sbjct: 2 IRVLLADDHVIVRAGLRRIIEDSEDIKVIVEASNGKEAIDLTLEHCPDVAVVDISMPGID 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 + L + ++ +L+L E+ Y G E++V ++ + Sbjct: 62 GLEVVSR-LHAELPDLPMLILTMHEEEQYVVRAIEAGAMGYMTKKSAPEQLVTAIRKLHS 120 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 G + T++ A L + + L+ RE ++L L G +N EIA S IS T Sbjct: 121 GSRFLTEEAAELLALRVSRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYHISVKT 180 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDN 213 V T+ L KK+ ++N +A N Sbjct: 181 VDTYRARLLKKLNLRNNADISRFAIQN 207 >UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphylococcaceae RepID=B9E7V9_MACCJ Length = 210 Score = 232 bits (594), Expect = 6e-60, Method: Composition-based stats. Identities = 44/202 (21%), Positives = 92/202 (45%), Gaps = 10/202 (4%) Query: 13 LLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS---GSIILLDMMEADKKL 67 ++L+ + + L + S + +N + L+ + +I++D++ + Sbjct: 6 IILVDDHHIVRQGMKFLLSTEASFNVIADFNNGRELLEHLDETQLPDLIIMDLVMPELNG 65 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + K ++K+L+L++ D + +G + + ++N ++ + G Sbjct: 66 IEATRR-IKAKYPDVKVLVLSSFIDEEHVLGVMDAGADGYEMKDSEPKALINTIKQIAAG 124 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 E F + + + L+ RE E+L + G +N EIA LF+SE TV Sbjct: 125 EQIFHPDVMKV----RKSGMNLAHLRNPLSKRELEVLKAMSEGLTNKEIAEKLFVSEKTV 180 Query: 188 KTHLYNLFKKIAVKNRTQAVSW 209 KTH+ ++F K+ V +RTQA + Sbjct: 181 KTHVSHIFAKLEVGDRTQASMY 202 >UniRef50_D1BUI8 Two component transcriptional regulator, LuxR family n=22 Tax=Actinomycetales RepID=D1BUI8_XYLCX Length = 219 Score = 232 bits (593), Expect = 6e-60, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 85/216 (39%), Gaps = 7/216 (3%) Query: 5 VHSIHGHTLLLITKSSLQATALLQHLKQ--SLAITGKLHNIQRSLDDISS--GSIILLDM 60 + + + L+ + + L+ L + G+ +L + + +++LD+ Sbjct: 1 MADMDPVRVFLVDDHEVVRRGVADLLEAESDLEVVGEAGTAAEALVRVPALAPDVVVLDV 60 Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 D + ++ + ++ L+L + +D G +V+ Sbjct: 61 RLPDGDGVAVCRELRATT--DVACLMLTSFDDDEALFDAIIAGAAGYVLKQVRGTDLVHA 118 Query: 121 LQGVLRGECYFTQKLASYLITHSG-NYRYNSTESALLTHREKEILNKLRIGASNNEIARS 179 ++ V G A ++ R++ A LT +E+ IL+ + G +N +I Sbjct: 119 IRTVAAGGSMLDPHAAERVMARMRAQARHDDDPLASLTPQEQRILSLIGQGMTNRQIGAE 178 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLR 215 LF++E TVK ++ NL K+ ++ R Q A R Sbjct: 179 LFLAEKTVKNYVSNLLAKLGMERRVQVAVLATKLGR 214 >UniRef50_A8LHM9 Two component transcriptional regulator, LuxR family n=1 Tax=Frankia sp. EAN1pec RepID=A8LHM9_FRASN Length = 215 Score = 232 bits (593), Expect = 6e-60, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 85/209 (40%), Gaps = 7/209 (3%) Query: 11 HTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 +++ L L ++ L +TG+ + Q +L + ++LLD+ Sbjct: 2 IRVVVADDQPLVRLGLKVLIETEDDLELTGEAEDGQAALALVRRTRPDVVLLDIRMPVLD 61 Query: 67 LIHYWQDTLSRKNN-NIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 + + + + +++++ T E Y +G + ++ ++ V Sbjct: 62 GLAALRAITADPALTDTRVVMVTTFELDEYVFEALRNGASGFVLKDTEPADLLRAIRVVA 121 Query: 126 RGECYFTQKLASYLITHSGNYRYNST--ESALLTHREKEILNKLRIGASNNEIARSLFIS 183 GE + + +I + LT RE+E++ + +G SN+EIA L IS Sbjct: 122 AGESLLSPTITRRVIETFARRPAAPAAVDLTSLTVREREVMGLVGLGLSNDEIAARLVIS 181 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 T +TH+ + K++ ++R Q AN Sbjct: 182 PATARTHVSRVMVKLSARDRAQLAVLANQ 210 >UniRef50_C0Z9R4 Two-component hybrid sensor and regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z9R4_BREBN Length = 593 Score = 232 bits (593), Expect = 6e-60, Method: Composition-based stats. Identities = 50/216 (23%), Positives = 83/216 (38%), Gaps = 14/216 (6%) Query: 10 GHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADK 65 G +L++ +L L+ Q L + G N +LD I ++LLD+ Sbjct: 374 GIRILIVDDQPFVRESLQLVLQNQQDLQVVGVAENGLMALDIIPKEKPDVVLLDVQMPVM 433 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 + + ++++++L T E+ NG +V ++ V Sbjct: 434 DGAKTI-QAIRERWPDMRVIMLTTFEETALAAETLGRGANGYLLKSVSPVELVEAIRVVH 492 Query: 126 RGECYFTQKLASYLITHSG---------NYRYNSTESALLTHREKEILNKLRIGASNNEI 176 +GE K+A L + LT RE+ IL L G I Sbjct: 493 QGEALINHKIAEVLFKEMRLQQEELNGLRQKQGRDCPYGLTERERGILASLVEGLRMKTI 552 Query: 177 ARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 A +F+SE TV+ ++ K+ VKNR +AV A D Sbjct: 553 AEKIFLSEGTVRNCTTVIYAKLGVKNREEAVKKARD 588 >UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32 Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ Length = 231 Score = 232 bits (593), Expect = 7e-60, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 90/218 (41%), Gaps = 14/218 (6%) Query: 4 EVHSIHGH-TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLD------DISSGS 54 E HSI +LLI +L + HL + L + G+ + +L Sbjct: 11 EGHSIDAPARVLLIDDHALVRDGMRMHLTLQPDLYVVGEADGGEAALAWLERAGARERPD 70 Query: 55 IILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQ 114 +++ D+ I L + I +L+++ ++ Y G Sbjct: 71 LVITDIGMRGMGGIALTA-ALHEQYPEIAVLVVSMHDNLEYARQAVRAGARGYVLKDAPA 129 Query: 115 ERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNN 174 + ++ ++ VL G +++ ++A + + LT RE++IL + G +N Sbjct: 130 DELMAAIEAVLAGRVFYSARIARGMAEQM----PATGPLDALTRRERDILGCIGRGMANK 185 Query: 175 EIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 EIA L +S TV+TH NL +K+ ++ R V +A + Sbjct: 186 EIATQLGVSVRTVETHRLNLKRKLGIEGRAGLVKYAVE 223 >UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=A5G586_GEOUR Length = 226 Score = 232 bits (593), Expect = 7e-60, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 81/209 (38%), Gaps = 7/209 (3%) Query: 10 GHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADK 65 +LL+ + L L + ++ + + N + ++ ++++D+ + Sbjct: 12 NIRVLLVDDHKIMRKGLKAILALEHTIEVVAEAANGREAIRKADELLPDVVVMDLTMPEM 71 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 I + ++ + +++ L+L+ D G E +V + V Sbjct: 72 NGIEAIRQIVAA-HPDVRTLVLSMVLDRACVMETFKAGATGYLLKDCAVEELVGAIHTVA 130 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTESA--LLTHREKEILNKLRIGASNNEIARSLFIS 183 GE Y ++ S +I ++ + L+ RE+E+L + G S EIA + +S Sbjct: 131 SGEPYLCPQITSLVIRDYTKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFTFGVS 190 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 TV ++ KK+ + N +A Sbjct: 191 IKTVAVQRMSVMKKLNLFNVADLTKYAVR 219 >UniRef50_B5JPJ0 Sigma-70, region 4 family n=3 Tax=Verrucomicrobiales RepID=B5JPJ0_9BACT Length = 213 Score = 232 bits (593), Expect = 7e-60, Method: Composition-based stats. Identities = 43/207 (20%), Positives = 88/207 (42%), Gaps = 5/207 (2%) Query: 7 SIHGHTLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDI--SSGSIILLDMME 62 S + ++ +L + +L+ S+ + + +L + + ++L+D+M Sbjct: 2 SEASIKIAIVEDQDTTRESLEAIINLEHSMECILTCSSGEEALSKLPKARPDVVLMDIMM 61 Query: 63 ADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 I L I+I+++ +D G E+V ++ Sbjct: 62 PYMTGIE-CASKLKDLMPEIEIVMITVYQDPDLIYSALRAGACGYLLKRSTPEQVTTAIR 120 Query: 123 GVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFI 182 RG + ++A +I++ S++ L++RE+E+L + G +N EIA L + Sbjct: 121 DAKRGGMPMSVEVARRVISYFRQEAQVSSDVDSLSNREREVLEFVAQGFTNKEIAAKLSV 180 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSW 209 + TV HL N +KK+ V+ RT+A Sbjct: 181 TPETVHWHLKNCYKKLHVRTRTEAAMK 207 >UniRef50_C9Z3C4 Putative two-component system response regulator n=1 Tax=Streptomyces scabiei 87.22 RepID=C9Z3C4_STRSW Length = 221 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 42/205 (20%), Positives = 82/205 (40%), Gaps = 6/205 (2%) Query: 13 LLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSL--DDISSGSIILLDMMEADKKLI 68 +LL + +++ + + L + G+ + + ++ ++++D+ + Sbjct: 5 VLLADDQDMVRSSMRIMIDVEADLKVVGEASDGEAAIGMAARLRPDVVVMDIRMPRMDGV 64 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 + S + +L L T + Y G + ++ G++ V RGE Sbjct: 65 AATRSIRSASSPPA-VLALTTFDLDEYLFGTLRAGAAGFVLKQDSAATLLEGIRAVARGE 123 Query: 129 CYFTQKLASYLITHSGNYRYNS-TESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 + + LI A +T RE+++L L SN +IA L I E+TV Sbjct: 124 GFVSPGPTRRLIERVSVPEDTPYQLPAEVTRRERDVLALLGRAMSNTQIAHRLHIEESTV 183 Query: 188 KTHLYNLFKKIAVKNRTQAVSWAND 212 K H+ NL K+ + R QA A+ Sbjct: 184 KYHVQNLLTKLDARTRVQAALIASR 208 >UniRef50_B1WQK4 Two-component response regulator n=19 Tax=Cyanobacteria RepID=B1WQK4_CYAA5 Length = 247 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 10/212 (4%) Query: 8 IHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNI----QRSLDDISSGSIILLDMM 61 I +L++ L L Q L + I G+ + Q++L+ ++++D+ Sbjct: 35 ITSMRILIVEDDPLMQLGLEQALSEHPNFEIIGQAEDGYTGVQQALEL--KPDLVVMDIG 92 Query: 62 EADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGL 121 I + + + NI +++L + + ER++ + Sbjct: 93 LPRLDGIAATKQ-IKEQEPNIHVVMLTSHTLQTEVVAALSSGADAYCIKGASLERLLAAI 151 Query: 122 QGVLRGECYFTQKLASYLITHSGNYRYNSTES-ALLTHREKEILNKLRIGASNNEIARSL 180 + G Y ++A ++ + + ++ ALL+ RE E+L + G SNNEIA L Sbjct: 152 EAAQDGATYLDPQIARLVLDNLKSPNPEPNQNIALLSERELEVLKLIVEGKSNNEIAEDL 211 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 ++S NT+KTH+ + K+AV +R QA A Sbjct: 212 YLSTNTIKTHVRGIMNKLAVDDRVQAAVVALR 243 >UniRef50_A6TUG7 Two component transcriptional regulator, LuxR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TUG7_ALKMQ Length = 201 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 41/203 (20%), Positives = 84/203 (41%), Gaps = 11/203 (5%) Query: 11 HTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 +L++ L +L L +Q + + +N ++ ++L+D+ Sbjct: 1 MKILIVDDDQLVCQSLQVLLSREQDMDVMATANNGAEAITCCRDILPDVVLMDIQMPVMD 60 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I ++ + ++ I+I++L T +D + G + + L+ + Sbjct: 61 GIQATRE-IKKEWPQIRIMMLTTFQDEQNIRLAISAGAEGYLIKSTEVSSMAQQLRVLFS 119 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 G + L+ + LT RE++I+ + G SN EIA L+ISE T Sbjct: 120 GTSVLDADVLKRLM------QPQRKGFEELTPRERDIVELVVQGLSNREIAEQLYISEGT 173 Query: 187 VKTHLYNLFKKIAVKNRTQAVSW 209 V+ L + +K+ V++RTQ + Sbjct: 174 VRNTLSIILEKLQVRDRTQLAIY 196 >UniRef50_C1I7X4 Two-component system response regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I7X4_9CLOT Length = 226 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 9/213 (4%) Query: 9 HGHTLLLITKSSLQATAL--LQHLKQSLAITGKLHNIQRSLDDISS--GSIILLDMMEAD 64 + +++ +L L + ++ L I G+ + + L+++ + +ILLD+ Sbjct: 4 NKIRTIVVDDHALIREGLNRIISFEEDLIICGQFRSGEELLNNMKNYNPDVILLDINMPG 63 Query: 65 KKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGV 124 K I + TL +IK+++L D + +VN ++ V Sbjct: 64 KNGIETLK-TLKILYPDIKVVMLTVENDKKTIMESIDIGADAYILKESAGSEIVNAIRNV 122 Query: 125 LRGECYFTQKLASYLI----THSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL 180 GE Y + L + + LLT+RE IL ++ G N EIA L Sbjct: 123 YLGEKYIDKSLIKAIFLDIKSDVACKNKEIESLKLLTNRELNILYEISKGLKNKEIAEKL 182 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 F+SE TVK ++ ++FKKI V++R QA +A N Sbjct: 183 FLSEKTVKNYITSIFKKIEVEDRVQATIYAIRN 215 >UniRef50_C0GF31 Two component transcriptional regulator, LuxR family n=3 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GF31_9FIRM Length = 218 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 75/190 (39%), Gaps = 5/190 (2%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKL 67 ++++ ++ L ++ ++ + + + +++ ++++D+ Sbjct: 3 RVMIVDDHAVVRVGLKSLIELHGDFSVIAEAGSGEEAVEVARETVPDVVVMDVRMPGMSG 62 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + + K+++L + D +G D +++ ++ R Sbjct: 63 IDACR-AIVEAVPDTKVIMLTSYADDEAIYSAILAGASGYVLKQTDNAKLLEAIEQAARN 121 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 E + ++ + A L+ EK+IL + G N EIA LF++E TV Sbjct: 122 ESLLDPHVTGKVLKRMKEIAAATQYEAKLSETEKKILVLIAEGKRNKEIAEELFLAEKTV 181 Query: 188 KTHLYNLFKK 197 + ++ +F K Sbjct: 182 RNYVSKIFSK 191 >UniRef50_B4D831 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B4D831_9BACT Length = 209 Score = 230 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 13/207 (6%) Query: 10 GHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADK 65 +L++ ++ L++ + ++ L + G+ N + L+ ++ +D Sbjct: 4 KIRVLIVDDHAMMRLGLVEAIAGERDLTLVGEAANGTQCLEQYRKHQPDVVTMDFRLPGA 63 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 L + + ++++L+ E G + E V+ ++ V+ Sbjct: 64 DGAESTAH-LRTEFPDARVVVLSVFEGEEDIWRAVEAGAMGYVSKSAEVEEVLEAIRCVV 122 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 GE YF +AS L + LT RE ++L+ + G SN EIA +L +SE Sbjct: 123 GGETYFPAPIASKLASRRTR--------DALTPREHQVLHHIVAGLSNKEIAAALHMSEA 174 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWAND 212 TVK H+ N K+ V +RTQA A Sbjct: 175 TVKLHISNTLAKLHVADRTQAAIVAVQ 201 >UniRef50_D1V9H6 Two component transcriptional regulator, LuxR family n=2 Tax=Actinomycetales RepID=D1V9H6_9ACTO Length = 219 Score = 230 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 88/212 (41%), Gaps = 9/212 (4%) Query: 11 HTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADKK 66 ++++ ++ T L + + + + + +++ + ++L+D+ Sbjct: 2 IRVVIVDDQAIVRTGLARIFGAEDGFDVVAECADGAQAVATVTRLRPDLVLMDVRMPRLD 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I + + +L L T ++ G E ++ + V Sbjct: 62 GIEATRQLCAAPEPP-PVLALTTFDEDEVLWGVIEAGAQGFVLKDSTAEDLLAAARVVAA 120 Query: 127 GECYFTQKLASYLITHSG----NYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFI 182 G +F +A ++ + R + LLT RE ++L L G N EIA++L + Sbjct: 121 GGAWFDPAVAPRMMRAYRGAVASRRREAARLDLLTAREHDVLRLLARGQVNAEIAQALRV 180 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 S TVK+H+ +F+K+ V++R A+ +A D+ Sbjct: 181 SPGTVKSHIGAIFEKLGVRDRAAAIVFAFDHG 212 >UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microscilla marina ATCC 23134 RepID=A1ZEE6_9SPHI Length = 213 Score = 230 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 46/206 (22%), Positives = 90/206 (43%), Gaps = 8/206 (3%) Query: 15 LITKSSLQATALLQHLK--QSLAITGKLHNIQRS---LDDISSGSIILLDMMEADKKLIH 69 ++ ++ L Q L + + + + L I+L D+ + Sbjct: 6 IVEDHTIVRQGLKQLLAKYAEMKVLAEFGVPDQIMDNLAKGERPDIVLCDINLPGMDGL- 64 Query: 70 YWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGEC 129 + + +K + KI++L + Y +G F+ ++ ++ G++ + G+ Sbjct: 65 ALTEKIKQKYPDQKIIILTMHQKEFYVLKAFDAGADGYFHKDTEESELIMGIKKIYNGQK 124 Query: 130 YFTQKLASYLITHSGNYRYNSTE--SALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 YF Q ++ LI + + +S + LT REKE+L ++ G N EI L IS TV Sbjct: 125 YFCQSVSQILINRLLDTKNSSGKTLLPTLTFREKEVLEQVVAGLGNREIGDKLCISTRTV 184 Query: 188 KTHLYNLFKKIAVKNRTQAVSWANDN 213 + H N+ +K +KN + V +A +N Sbjct: 185 ENHRANILRKFGLKNTVELVKFAIEN 210 >UniRef50_C8NKN6 Two component response regulator n=3 Tax=Corynebacterium RepID=C8NKN6_COREF Length = 225 Score = 230 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 82/215 (38%), Gaps = 10/215 (4%) Query: 6 HSIHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMM 61 + +L+ L TAL L + ++ + N Q++++ + +LD+ Sbjct: 5 DNEQPIRVLIADDQPLIVTALTTILGTQHNIDVVATASNGQKAIEAAQQWAIDVAVLDIQ 64 Query: 62 EADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGL 121 I + + + KIL+L T + + G E +++ + Sbjct: 65 MPYVNGIDA-AQAIKQHRESTKILMLTTFDSEDLVRRALEVGVQGFLLKDAGPEALIDAI 123 Query: 122 QGVLRGECYFTQKLASYLITHSGNYRYNSTES-----ALLTHREKEILNKLRIGASNNEI 176 + G + ++ Y+I LT RE E+L ++ +N EI Sbjct: 124 NRIYHGASVLSPEVTEYVINVFRVSSPQPPSPCDTLFEALTPRELEVLKRVAQAETNAEI 183 Query: 177 ARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAN 211 A L I TVKT++ L KI V++R WA+ Sbjct: 184 ANYLHIGSETVKTYVSRLISKIGVRDRVGLAVWAH 218 >UniRef50_C1YU02 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1YU02_NOCDA Length = 218 Score = 230 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 43/203 (21%), Positives = 84/203 (41%), Gaps = 5/203 (2%) Query: 15 LITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKKLIHY 70 L+ +L L + + + +TG+ + D + ++L+D+ I Sbjct: 6 LVDDEALIRAGLAALINAEDDMRVTGQADDGADVPDLVRRTRPDLVLMDVRMPRLDGIQA 65 Query: 71 WQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECY 130 + + + ++++L T ++ Y +G E ++ ++ RG+ Sbjct: 66 TRTLHTTLTHPPRVIVLTTFDNDDYVWGALRAGAHGFLLKRTPPEDILAAIRLAHRGDTL 125 Query: 131 FTQKLASYLITHSGNYRYNSTESAL-LTHREKEILNKLRIGASNNEIARSLFISENTVKT 189 +L + + LT RE + L + G +N EIA LF+ TVKT Sbjct: 126 LFPTALRHLAATQPAAPTPAARAVATLTQRESQTLTLMAQGLTNAEIADRLFLGTETVKT 185 Query: 190 HLYNLFKKIAVKNRTQAVSWAND 212 H+ ++ K+ V++RTQAV A D Sbjct: 186 HVSHILTKLGVRDRTQAVIAAYD 208 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 79/214 (36%), Gaps = 8/214 (3%) Query: 8 IHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEA 63 + L + + L + + G+ + +L I + + ++D+ Sbjct: 2 TDRIRVALADDHPIVLAGIRTLLNADPEIELVGEATSGSEALPMIHAADPDVAVVDVSMP 61 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 + + + ++L+L ED Y G E ++ ++ Sbjct: 62 GLNGLELTERV-AGSCPRTRVLVLTVHEDAAYVQPLLKAGARGYLLKRSAAEDLLRAVRA 120 Query: 124 VLRGECYFTQKLASYLITHSGNYRY---NSTESALLTHREKEILNKLRIGASNNEIARSL 180 V G Y +AS+ + H + L+ RE ++L + G SN EIAR Sbjct: 121 VAAGGIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIARRF 180 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 +S +++T+ +K+ ++ R + + +A + Sbjct: 181 DLSVKSIETYKARAAEKLGLRTRAEIIRYAAAHG 214 >UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6ADI3_LEIXX Length = 207 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 41/207 (19%), Positives = 77/207 (37%), Gaps = 12/207 (5%) Query: 11 HTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQR--SLDDISSGSIILLDMMEAD-K 65 ++L+ + + L ++ + G + + L + I+L+D+ Sbjct: 2 IRIVLVDDHPILRHGMRTLLDTQEDFEVVGDCGDPEEYRLLLKSARPDIVLMDLALGGDT 61 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 + T + + +L+ T + +G + ++ Sbjct: 62 DGVALTAHT-RATSPSTAVLVFTTYDSDADFVRSLDAGASGYLLKDSTPVELFAAIRTAR 120 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 G + +AS L+ LT RE E+L L G +N ++ LF+SE Sbjct: 121 DGGSALSPAVASRLMDRMR------APQESLTPREIEVLALLATGRTNRQVGERLFVSET 174 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWAND 212 TVKTH+ ++F K+ V R AVS A Sbjct: 175 TVKTHVNHIFTKLGVDTRAAAVSRAMK 201 >UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD Length = 224 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 89/208 (42%), Gaps = 9/208 (4%) Query: 12 TLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDI--SSGSIILLDMMEA-DKK 66 ++++ +L L L + + G+ + +L ++L+D+ Sbjct: 5 RVVIVDDHALVRQGLRLILHGVAGIEVVGECSCGEDALKAAVKDRPDVMLMDVHMPQGLD 64 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I + L + +++++L +D + + ++G+ + +D +V +Q Sbjct: 65 GITTARH-LRQIAPQVRVIMLTMFDDRVHVEKMLDAGVSGIVFKHDDSSEIVAAIQHGQP 123 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 G Y +++ + S + L+ RE E+L L G +N E+A +L IS T Sbjct: 124 GHPYLSRRWGQR---ANAETVSPSRTAERLSPRETEVLVLLAQGYTNREVADALHISVKT 180 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWANDNL 214 V+TH ++ ++I + +R V +A N Sbjct: 181 VETHRQHIMRRIGLHSRAALVRYAYQNG 208 >UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeobacter violaceus RepID=Q7NN43_GLOVI Length = 217 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 89/208 (42%), Gaps = 6/208 (2%) Query: 10 GHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDI--SSGSIILLDMMEADK 65 +LL+ L L L + + + + + + +L ++LLD+ Sbjct: 4 RVRVLLVEDDPLFRMGLAMVLRHQPQIELVAEAEDGETALALANRHRPQLVLLDIGLPGL 63 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 L +++ I++L+L + E+ +G +R++ ++ V Sbjct: 64 DGRQTLVR-LKQEHPEIRVLVLTSREEAGLVQAMLQAGADGYCLKGIGPDRLLTVIREVS 122 Query: 126 RGECYFTQKLASYLITHSG-NYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISE 184 G +F K+ + + + +A LT RE+E+L + GASN EI R L IS Sbjct: 123 AGNGWFDAKVLAQVRSAFAVAPSEPPANAAALTEREREVLGWIARGASNPEIGRQLHISS 182 Query: 185 NTVKTHLYNLFKKIAVKNRTQAVSWAND 212 TV+ H++ + +K+ +RTQA A + Sbjct: 183 GTVRVHVHAILRKLGATDRTQAAVLALE 210 >UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=Flavobacteriales RepID=A0M4P6_GRAFK Length = 205 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 39/206 (18%), Positives = 84/206 (40%), Gaps = 11/206 (5%) Query: 11 HTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMMEADKK 66 L++ + + + + + G +N Q ++ ++I+ D+ Sbjct: 2 IRLVIAEDHTALIDGIKVFFEYEEDIEFVGFANNGQELIELTRRKKPNLIITDIRMPVMD 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I ++ L + NIKI+ + + +G + ++ ++ V Sbjct: 62 GIQATKEIL-EEFPNIKIIAFSMFDQDKAVQQMLEAGASGYILKNSSLKELLYAIRKVHE 120 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 GE Y+ + + A+LT R++EIL + G +N EIA LFI + T Sbjct: 121 GEHYYDPNIT------VKQKSVSPKSKAVLTGRQREILKLIGQGRTNQEIADQLFIGKTT 174 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWAND 212 V+TH N+ +K+ ++ + + +A + Sbjct: 175 VETHRKNMIRKLGLQGAGELLRYALE 200 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 7/211 (3%) Query: 8 IHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDI--SSGSIILLDMMEA 63 + ++++ +L + L+ + G+ + + I I++LD+ Sbjct: 2 MKKISIIIADDHTLIRDGIKSLLQSVDEFEVVGEATDGDELIQFIDTLDPEIVVLDITMP 61 Query: 64 DKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQG 123 K I + + NN +K ++L+ ++ Y D E ++ ++ Sbjct: 62 KKSGIEVITEV-KKYNNRVKFIVLSMHDNPEYVLKSVQSGALSYLLKNTDHEEIIKAVKA 120 Query: 124 VLRGECYFTQKLASYLITHSGNYR--YNSTESALLTHREKEILNKLRIGASNNEIARSLF 181 V G+ YF+ + S ++ N S + LT RE E+L ++ +G S IA LF Sbjct: 121 VSAGQKYFSPDIYSIILNGLANPELVKASQIAETLTKRELEVLKEVSMGLSTKLIADKLF 180 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 IS TV+TH NL KK+ V N + + A D Sbjct: 181 ISVRTVETHRINLMKKLDVHNSAELIKKAMD 211 >UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R6_THERP Length = 221 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 83/213 (38%), Gaps = 9/213 (4%) Query: 7 SIHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDIS--SGSIILLDMME 62 + + +LL + L L+ +A+ G+ +++ + +LD+ Sbjct: 2 TTNKIRVLLADDHPIVRVGLRALLEAEPDIAVVGEAGTADEAVELARTLQPDVAVLDISM 61 Query: 63 ADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 + + S + L+L + Y +G +V ++ Sbjct: 62 PG-NGLEALRRIASLGLP-TRTLILTVHAEERYLLPVLQAGGSGYVRKSSLHTDLVEAIR 119 Query: 123 GVLRGECYFTQKLASYLITHSGNYRYN---STESALLTHREKEILNKLRIGASNNEIARS 179 V RGE + Q A L+ ++ + LL+ RE+E+L G + EIA Sbjct: 120 LVARGEVFIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIADQ 179 Query: 180 LFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 LF+S TV+T+ + + +K+ R++ V +A Sbjct: 180 LFLSPKTVETYRHRVMQKLGFSRRSELVRFALR 212 >UniRef50_B4D808 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D808_9BACT Length = 212 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 79/212 (37%), Gaps = 13/212 (6%) Query: 5 VHSIHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDM 60 + + LLL+ + + L L + A+ + + ++++ + L+D+ Sbjct: 1 MTPRNSIRLLLVDDHFVVRSGLAMLLAQQDDFAVVAEADDAEQAVAHYRQHRPDVTLMDV 60 Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 I Q + + + ++++L T + G + Sbjct: 61 RMPGASGIEALQR-IRGEFPDARVIMLTTYDLDEDVFRALEAGAVGYLLKSVRHAELFAA 119 Query: 121 LQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL 180 ++ V GE Q L + + R L+ RE E L+ L G SN EI +L Sbjct: 120 VRKVHAGERCVPQSLETRCKNGALRSR--------LSPREVETLDLLARGFSNREIGSAL 171 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 ++E T K H+ + K+ +R +AV A Sbjct: 172 GVTERTAKAHVQAILVKLEAADRAEAVDAAYK 203 >UniRef50_B4D2I0 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2I0_9BACT Length = 209 Score = 229 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 44/207 (21%), Positives = 76/207 (36%), Gaps = 13/207 (6%) Query: 10 GHTLLLITKSSLQATALL--QHLKQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADK 65 L+L + L L+ I + + ++ + LLD D Sbjct: 5 PIRLMLADDHFMVRMGLATSLKLEPDFEIVAEADTGKEAISFYQHHRPDVALLDCRLPDM 64 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 I L + +IL+L+ + +V ++ V Sbjct: 65 TGIEVT-QALRAADATARILILSAFNGEEDVFRAVQAGAESYLLKNARRTEIVTAIRTVH 123 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISEN 185 G YF ++++ L LT REK +L ++ G+SN EI L I+E+ Sbjct: 124 AGSPYFPPEISAILAARMRR--------EELTPREKSVLFEIVKGSSNKEIGCCLEITES 175 Query: 186 TVKTHLYNLFKKIAVKNRTQAVSWAND 212 VK H+ +L +K+ K+RT A + A Sbjct: 176 AVKIHVTHLLQKLNAKDRTHAATIAIQ 202 >UniRef50_B6A2W0 Two component transcriptional regulator, LuxR family n=47 Tax=Proteobacteria RepID=B6A2W0_RHILW Length = 223 Score = 229 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 48/214 (22%), Positives = 80/214 (37%), Gaps = 10/214 (4%) Query: 5 VHSIHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDM 60 + +LLI L L L+ + + G Q LD ++L+D+ Sbjct: 1 MTERPKIRVLLIDNHPLVLDGLKAVLETFDHIEVAGTAGLAQTGLDIARQIQPQVVLMDI 60 Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 I + + I++++L+ + Y G + +V Sbjct: 61 NMPKLSGIDAI-ELFRNEFPEIRVVMLSMHDSREYISSSVMHGAAGYVLKDVSTDEIVAA 119 Query: 121 LQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL 180 ++ V G YF+ + L+ S LT RE +IL + G SN EIA L Sbjct: 120 IETVADGGTYFSSGVFDALMGE-----RAEEGSDPLTPREHDILGLIVAGRSNREIAEVL 174 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 IS T +TH NL KK+ + + +A D+ Sbjct: 175 GISSATAETHRKNLKKKLGIATTAGLIRYALDHG 208 >UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA Length = 209 Score = 229 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 80/204 (39%), Gaps = 6/204 (2%) Query: 12 TLLLITKSSLQATALLQHLK-QSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKLI 68 +L+ L L+ L + I G+ + + +++ + ++L+D+ + + Sbjct: 4 RILIAEDQQLVRQGLVALLAVDDVTIVGEAEDGKGAIEMARTLAPDVVLMDLSMPELDGV 63 Query: 69 HYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGE 128 + + + +++L+L +G ++ + V G+ Sbjct: 64 EATRR-IKQVAPQVRVLVLTVANCERRVAEALAAGADGYALKKLGHGELMAAINAVCAGK 122 Query: 129 CYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVK 188 Y L+ L+ S LT RE+E+L + G N EIA L I+ TV+ Sbjct: 123 TYLGPGLSEDLVKEYLEGSDMGGGS--LTAREREVLQLIARGHKNREIADELGIAIKTVE 180 Query: 189 THLYNLFKKIAVKNRTQAVSWAND 212 TH + +K+ + N + ++A Sbjct: 181 THRTKIMQKLDLHNSAELAAYAIR 204 >UniRef50_B2KE01 Two component transcriptional regulator, LuxR family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KE01_ELUMP Length = 225 Score = 229 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 7 SIHGHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMME 62 ++++ +L + L ++ L + G+ + + ++ +IL+D+ Sbjct: 4 KKKKIRVVIVDDQTLFREGIKDVLTGEKWLEVVGEGSDGEEAVALAKKLKPDVILMDIKL 63 Query: 63 ADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 I + + N I +L+L++ ED + NG M ++N ++ Sbjct: 64 PKLDGISATRK-IREDNPAINVLMLSSFEDEAHVIEAIQAGANGYLSKMLPASELLNSIK 122 Query: 123 GVLRGECYFTQKLASYLITHSGNYRYNSTES-ALLTHREKEILNKLRIGASNNEIARSLF 181 Q+L L+ N T S ALLT E ++++ L G SN E+A L Sbjct: 123 TFTSEGLMIPQQLMGKLLHGLRKMGDNGTPSQALLTRTEIKVISLLGKGLSNKELATELS 182 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 S T+K HL + F K+ V +RT+AV A + Sbjct: 183 CSVKTIKNHLNSAFHKLGVGSRTEAVVKAIE 213 >UniRef50_C1A730 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A730_GEMAT Length = 209 Score = 229 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 85/210 (40%), Gaps = 13/210 (6%) Query: 7 SIHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSIILLDMME 62 S +LL+ ++ L L + + G+ + ++D + +++ D+ Sbjct: 2 SAMTIRILLVDDHAILREGLAALLNGVDGMQVIGQAGDGATAIDLYRNLLPDVVICDLRM 61 Query: 63 ADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQ 122 T+ + +++LL T + + + ++++ + Sbjct: 62 VPMDGTEVTS-TIRAEFPAARVILLTTYDTDEEVFRGLRAGASSYLLKDVEPAQLIDTVH 120 Query: 123 GVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFI 182 V G +A+ L H + LT R+ E+L L G SN EIA +L+I Sbjct: 121 AVYAGRKAIDPSIAAKLAEHVAS--------DALTARQLEVLRSLAEGRSNIEIANTLYI 172 Query: 183 SENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 SE TVK H+ + +K+ ++RTQAV+ Sbjct: 173 SEGTVKAHIKAILQKLGARDRTQAVTIGIK 202 >UniRef50_A1VT42 Two component transcriptional regulator, LuxR family n=7 Tax=cellular organisms RepID=A1VT42_POLNA Length = 224 Score = 229 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 45/214 (21%), Positives = 89/214 (41%), Gaps = 13/214 (6%) Query: 9 HGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDI------SSGSIILLDM 60 L+L+ + L+ + + G+ ++ ++ + I+L D+ Sbjct: 3 ETIRLILVDDHPFVRDGVRMRLEATDDIRVVGEAGSVDEAMQLATDLGDERAPHIVLTDI 62 Query: 61 MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG 120 I + I +L+L+ + Y G + +VN Sbjct: 63 SMRGMSGIE-LAALFQHRFPGIDVLVLSMHNNLEYVKRAIESGAKGYVLKDAPAQELVNA 121 Query: 121 LQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL 180 ++ V GE +F+ +L ++ +R +S ++ LT +E L L G SN +IAR L Sbjct: 122 IRAVHAGETFFSPELQQ----YTEGFRASSGGNSPLTPKESATLAWLACGYSNKQIAREL 177 Query: 181 FISENTVKTHLYNLFKKIAVKNRTQAVSWANDNL 214 +S TV+TH NL +K+ + + + V +A D++ Sbjct: 178 SMSVRTVETHRLNLRRKLRITGQAELVKYAIDHM 211 >UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=uncultured bacterium BLR5 RepID=C0INV4_9BACT Length = 215 Score = 229 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 51/217 (23%), Positives = 80/217 (36%), Gaps = 14/217 (6%) Query: 1 MFNEVHSIHGHTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDISS--GSII 56 M E+ ++ + L + ++ + I G + +L I Sbjct: 1 MEFEMDPSAEIRIMCVDDHPLMHKGISALIQSQPDMTIVGAVSKAGDALATFREKVPDIT 60 Query: 57 LLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQER 116 L+D+ D I L + +I++L E G E Sbjct: 61 LMDLRLPDGNGIDTMISILKE-HPKARIIILTMFEGDVEIQRALKSGACGYILKNMPPED 119 Query: 117 VVNGLQGVLRGEC-YFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNE 175 ++ ++ V GE +A+ L H G LT RE E+L + G SN E Sbjct: 120 LLQVIRKVHSGEKKRLHPVIAATLADHFGE--------ENLTSRETEVLQLISEGNSNKE 171 Query: 176 IARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 + L ISE TVK H+ N+ K+ +RTQAVS A Sbjct: 172 VGNRLSISEETVKGHVKNILGKLGANDRTQAVSIAVR 208 >UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY27_AZOSE Length = 215 Score = 229 bits (585), Expect = 5e-59, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 82/206 (39%), Gaps = 5/206 (2%) Query: 11 HTLLLITKSSLQATALLQHLK--QSLAITGKLHNIQRSLDDI-SSG-SIILLDMMEADKK 66 ++L + AL L+ + I G+ N +D I I +D+ Sbjct: 3 IRIVLADDHQMFRHALRAMLEKEPGIRIVGEASNGDELIDLISHQPVDIACVDIGMPGMN 62 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I + L+ + +++++ L+ D + G E E ++ + V + Sbjct: 63 GIEATRRLLAIR-PHVRVIGLSAFSDRQFVLDLLNAGATGYVTKAEAGEELLRAIHTVQQ 121 Query: 127 GECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENT 186 + Y +A+ + + + +T RE+++L + G ++ IA L ++ +T Sbjct: 122 SKTYLCPDVAATVTNALLDNAPKDISAPRITARERQVLQLIAEGYTSTRIADRLHLAPST 181 Query: 187 VKTHLYNLFKKIAVKNRTQAVSWAND 212 V+ H N+ +K+ + + + +A Sbjct: 182 VEVHRRNIMRKLDLHSVAELTKYAIR 207 >UniRef50_D2PS71 Two component transcriptional regulator, LuxR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PS71_9ACTO Length = 220 Score = 229 bits (585), Expect = 5e-59, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 86/209 (41%), Gaps = 7/209 (3%) Query: 10 GHTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISS--GSIILLDMMEADK 65 +++ S AL + + +L + G +++ + ++L+D+ Sbjct: 4 RIGVVVAEDQSSVRAALAELVGSDPALDLLGCGATGDEAIELATRLHPDVVLMDIRMPGT 63 Query: 66 KLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVL 125 + + + + K+L+L T + Y G ++ + V Sbjct: 64 DGLTATR-VVCARLPATKVLVLTTFDLDEYVYEALGAGATGFLLKSAPVTDILRAIHTVH 122 Query: 126 RGECYFTQKLASYLITHSGNYRYNSTE--SALLTHREKEILNKLRIGASNNEIARSLFIS 183 G+ + ++ LI R T L+ RE E++ + G SN E+A LF+S Sbjct: 123 EGQAMLSPEITRRLIAEVSRGRTRRTPEAFEQLSPRELELVGAVLRGLSNEELAAELFLS 182 Query: 184 ENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 +TVKT+L +F K+ V++RTQ V A + Sbjct: 183 LSTVKTYLSRIFSKLDVRDRTQLVILAYE 211 >UniRef50_C4DCC2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DCC2_9ACTO Length = 225 Score = 229 bits (585), Expect = 6e-59, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 76/211 (36%), Gaps = 10/211 (4%) Query: 11 HTLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDISSG--SIILLDMMEADKK 66 L++ +L L L + + + + + + ++ + L+D+ Sbjct: 2 IRTLIVDDDALVRLGLCDLLDDEPDITVVAQAADGKSAVAQAERHRVDVALMDVRMPGMD 61 Query: 67 LIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLR 126 I L +++ L T + Y G D ++ ++ V Sbjct: 62 GIAATAR-LRALPEPAQVIALTTFDLDEYVYDMIAAGAAGFLLKDTDPGEIIRAIRVVAA 120 Query: 127 GECYFTQKLASYLITHSGNYRYNST-----ESALLTHREKEILNKLRIGASNNEIARSLF 181 G+ A LI LT RE ++L L +GA+N EIA SL Sbjct: 121 GDAMLHPAAARRLIERYHRAARPRATAVRHRVDRLTPRETDVLRHLALGATNAEIAASLS 180 Query: 182 ISENTVKTHLYNLFKKIAVKNRTQAVSWAND 212 + E+TVK H+ + + V NR QA A D Sbjct: 181 MRESTVKAHVTRILATLDVTNRVQAALCARD 211 >UniRef50_C1XWT0 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=C1XWT0_9DEIN Length = 206 Score = 229 bits (585), Expect = 6e-59, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 85/205 (41%), Gaps = 9/205 (4%) Query: 12 TLLLITKSSLQATALLQHL--KQSLAITGKLHNIQRSLDDIS--SGSIILLDMMEADKKL 67 + ++ + L + + L + G+ + + ++ ++ S ++L+D+ Sbjct: 3 RVFIVEDHAFTRDGLRVAVGREPDLQVVGEARSAEEGIEQLAHTSADVVLMDIGLPGMDG 62 Query: 68 IHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRG 127 I + + + +++++L + + D ++ ++ G Sbjct: 63 IEATK-LVKERF-GVRVVVLTVHQLEAEVLAAMTAGADAYCLKSTDPASLLLAIRAAAIG 120 Query: 128 ECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTV 187 Y ++A ++ S A L+ RE E+L + G SN EIA+ L IS +TV Sbjct: 121 STYLDPQIAHIVLGQLSVL---SGGQAQLSPRELEVLRLIAEGLSNKEIAQRLGISLSTV 177 Query: 188 KTHLYNLFKKIAVKNRTQAVSWAND 212 KTH+ L K++ +RTQA A Sbjct: 178 KTHIEELLAKLSASDRTQAAIKAVR 202 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.203 0.702 Lambda K H 0.267 0.0624 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,895,981,354 Number of Sequences: 3077464 Number of extensions: 121167001 Number of successful extensions: 407306 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 17674 Number of HSP's successfully gapped in prelim test: 23444 Number of HSP's that attempted gapping in prelim test: 337938 Number of HSP's gapped (non-prelim): 46759 length of query: 216 length of database: 1,040,396,356 effective HSP length: 123 effective length of query: 93 effective length of database: 661,868,284 effective search space: 61553750412 effective search space used: 61553750412 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.8 bits) S2: 92 (39.4 bits)