BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (222 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_B5EXE3 UPF0758 protein yicR n=116 Tax=Enterobacteriacea... 386 e-106 UniRef50_A4W511 UPF0758 protein Ent638_0101 n=3 Tax=Enterobacter... 347 2e-94 UniRef50_A7MQ95 UPF0758 protein ESA_04094 n=32 Tax=Bacteria RepI... 312 4e-84 UniRef50_A5UDB6 UPF0758 protein CGSHiEE_07200 n=30 Tax=Gammaprot... 232 6e-60 UniRef50_B0UUW7 UPF0758 protein HSM_0009 n=10 Tax=Pasteurellacea... 231 1e-59 UniRef50_A1SR15 UPF0758 protein Ping_0056 n=2 Tax=Gammaproteobac... 206 5e-52 UniRef50_Q5WTW4 UPF0758 protein lpl2409 n=6 Tax=Legionella RepID... 189 4e-47 UniRef50_Q21TE2 UPF0758 protein Rfer_3252 n=12 Tax=cellular orga... 189 8e-47 UniRef50_C9Y8Q3 DNA repair protein radC homolog n=1 Tax=Curvibac... 187 3e-46 UniRef50_Q31EB6 UPF0758 protein Tcr_1917 n=5 Tax=Gammaproteobact... 186 4e-46 UniRef50_Q46XP0 UPF0758 protein Reut_A2732 n=12 Tax=Proteobacter... 186 4e-46 UniRef50_D1JB12 Probable DNA repair protein radC homolog n=2 Tax... 184 1e-45 UniRef50_Q4UPP0 UPF0758 protein XC_3944 n=35 Tax=Proteobacteria ... 184 2e-45 UniRef50_B2UAP0 UPF0758 protein Rpic_2712 n=3 Tax=Burkholderiace... 183 3e-45 UniRef50_B2FJW1 UPF0758 protein Smlt0399 n=129 Tax=Proteobacteri... 182 7e-45 UniRef50_Q4FQM6 UPF0758 protein Psyc_1834 n=3 Tax=Moraxellaceae ... 182 9e-45 UniRef50_B5YIR9 DNA repair protein n=1 Tax=Thermodesulfovibrio y... 171 2e-41 UniRef50_Q3JV52 UPF0758 protein BURPS1710b_1139 n=75 Tax=Proteob... 171 2e-41 UniRef50_A9IU27 UPF0758 protein Bpet3149 n=5 Tax=Bordetella RepI... 169 5e-41 UniRef50_Q6F7Z8 UPF0758 protein ACIAD3126 n=19 Tax=Proteobacteri... 169 5e-41 UniRef50_A8R890 Putative uncharacterized protein n=1 Tax=Eubacte... 166 4e-40 UniRef50_B2V090 UPF0758 protein CLH_0547 n=18 Tax=Clostridium Re... 165 9e-40 UniRef50_B3E339 UPF0758 protein Glov_0523 n=8 Tax=Desulfuromonad... 163 4e-39 UniRef50_A5ZRS6 Putative uncharacterized protein n=5 Tax=Clostri... 162 1e-38 UniRef50_D2BJ47 DNA repair protein n=5 Tax=Dehalococcoides RepID... 161 2e-38 UniRef50_C8N8A0 DNA repair protein RadC n=1 Tax=Cardiobacterium ... 160 3e-38 UniRef50_A5IM26 UPF0758 protein Tpet_1235 n=7 Tax=Thermotogaceae... 159 6e-38 UniRef50_B7C9V0 Putative uncharacterized protein n=1 Tax=Eubacte... 157 3e-37 UniRef50_A9VIS8 UPF0758 protein BcerKBAB4_4299 n=107 Tax=Firmicu... 156 5e-37 UniRef50_UPI0000E0FF1E DNA repair protein RadC n=1 Tax=Rhodobact... 156 6e-37 UniRef50_B3HA66 DNA repair protein RadC n=3 Tax=Enterobacteriace... 155 9e-37 UniRef50_B2URH1 DNA repair protein RadC n=1 Tax=Akkermansia muci... 155 1e-36 UniRef50_C2BCF6 DNA repair protein RadC n=2 Tax=Anaerococcus Rep... 155 1e-36 UniRef50_A3ER13 DNA repair protein (RadC) n=3 Tax=Leptospirillum... 155 1e-36 UniRef50_A7HJG0 DNA repair protein RadC n=3 Tax=Thermotogaceae R... 153 4e-36 UniRef50_D2MNQ5 Putative DNA repair protein RadC n=1 Tax=Bulleid... 152 6e-36 UniRef50_C8NZ93 DNA repair protein RadC n=1 Tax=Erysipelothrix r... 152 7e-36 UniRef50_C5TNC6 DNA repair protein RadC n=3 Tax=Neisseria RepID=... 152 8e-36 UniRef50_C7RDS9 DNA repair protein RadC n=3 Tax=Anaerococcus Rep... 151 2e-35 UniRef50_A2RLC4 UPF0758 protein llmg_1515 n=4 Tax=Lactococcus la... 151 2e-35 UniRef50_C2KVW9 Possible DNA repair protein RadC n=1 Tax=Oribact... 151 2e-35 UniRef50_Q3A8G4 UPF0758 protein Pcar_0065 n=2 Tax=Bacteria RepID... 150 4e-35 UniRef50_Q82ZX1 UPF0758 protein EF_2926 n=40 Tax=Firmicutes RepI... 149 6e-35 UniRef50_Q38XC8 UPF0758 protein LCA_0852 n=1 Tax=Lactobacillus s... 149 6e-35 UniRef50_B9E733 DNA repair protein RadC homolog n=1 Tax=Macrococ... 149 7e-35 UniRef50_B9XSW5 DNA repair protein RadC n=1 Tax=bacterium Ellin5... 148 1e-34 UniRef50_B4RM65 UPF0758 protein NGK_1225 n=25 Tax=Neisseriaceae ... 148 1e-34 UniRef50_A5FRP1 DNA repair protein RadC n=6 Tax=cellular organis... 147 2e-34 UniRef50_B4CZF8 DNA repair protein RadC n=2 Tax=Verrucomicrobia ... 147 2e-34 UniRef50_Q0AWG3 UPF0758 protein Swol_1642 n=12 Tax=Firmicutes Re... 147 3e-34 UniRef50_Q1AVT6 UPF0758 protein Rxyl_1530 n=3 Tax=Bacteria RepID... 147 4e-34 UniRef50_C9L5T8 DNA repair protein RadC n=4 Tax=Clostridiales Re... 146 4e-34 UniRef50_C7GYN9 DNA repair protein RadC n=1 Tax=Eubacterium saph... 144 2e-33 UniRef50_Q2LSS5 DNA repair protein n=1 Tax=Syntrophus aciditroph... 144 2e-33 UniRef50_Q3AF80 UPF0758 protein CHY_0341 n=1 Tax=Carboxydothermu... 144 2e-33 UniRef50_A9AE97 DNA repair protein n=8 Tax=Bacteria RepID=A9AE97... 144 2e-33 UniRef50_Q46A65 UPF0758 protein Mbar_A2303 n=2 Tax=Methanosarcin... 144 2e-33 UniRef50_B1IPT7 DNA repair protein RadC n=3 Tax=Enterobacteriace... 144 3e-33 UniRef50_O67541 UPF0758 protein aq_1610 n=2 Tax=Aquificaceae Rep... 144 3e-33 UniRef50_A9BIK5 DNA repair protein RadC n=1 Tax=Petrotoga mobili... 144 3e-33 UniRef50_B2A699 DNA repair protein RadC n=1 Tax=Natranaerobius t... 144 3e-33 UniRef50_A6DS55 DNA repair protein RadC n=1 Tax=Lentisphaera ara... 143 3e-33 UniRef50_C8WXL6 DNA repair protein RadC n=3 Tax=Alicyclobacillus... 143 4e-33 UniRef50_Q9KR57 UPF0758 protein VC_1786 n=59 Tax=Proteobacteria ... 142 7e-33 UniRef50_C8U0Q3 Predicted DNA repair protein n=21 Tax=Enterobact... 142 9e-33 UniRef50_D1R5B1 Putative uncharacterized protein n=1 Tax=Parachl... 142 1e-32 UniRef50_B9Y7M6 Putative uncharacterized protein n=1 Tax=Holdema... 141 2e-32 UniRef50_A5KLJ1 Putative uncharacterized protein n=5 Tax=Clostri... 141 2e-32 UniRef50_B4X5D3 DNA repair protein RadC n=4 Tax=Alcanivorax sp. ... 141 2e-32 UniRef50_Q64AS5 DNA repair proteins n=1 Tax=uncultured archaeon ... 141 2e-32 UniRef50_C6DAT0 DNA repair protein RadC n=5 Tax=Enterobacteriace... 141 2e-32 UniRef50_B5YL92 DNA repair protein RadC n=1 Tax=Thermodesulfovib... 140 3e-32 UniRef50_C4FYP9 Putative uncharacterized protein n=1 Tax=Abiotro... 140 4e-32 UniRef50_B1YJT0 DNA repair protein RadC n=2 Tax=Exiguobacterium ... 139 5e-32 UniRef50_A4W1K3 UPF0758 protein SSU98_1084 n=76 Tax=Streptococcu... 139 6e-32 UniRef50_D1VVJ8 DNA repair protein RadC-like protein n=1 Tax=Pep... 139 6e-32 UniRef50_A1B4F1 UPF0758 protein Pden_2304 n=44 Tax=Alphaproteoba... 139 6e-32 UniRef50_A6Q5Q5 DNA repair protein RadC n=2 Tax=unclassified Eps... 139 7e-32 UniRef50_D1U9S4 DNA repair protein RadC n=1 Tax=Desulfovibrio ae... 138 1e-31 UniRef50_C4ZA49 DNA repair protein RadC n=1 Tax=Eubacterium rect... 138 1e-31 UniRef50_C7PSZ0 DNA repair protein RadC n=1 Tax=Chitinophaga pin... 138 1e-31 UniRef50_C4XRP2 DNA repair protein RadC n=4 Tax=Desulfovibrional... 138 1e-31 UniRef50_C7GE95 DNA repair protein RadC n=2 Tax=Roseburia RepID=... 138 1e-31 UniRef50_UPI000196B4AA hypothetical protein CATMIT_00107 n=1 Tax... 137 2e-31 UniRef50_C7TC16 DNA repair protein n=8 Tax=Lactobacillus RepID=C... 137 3e-31 UniRef50_Q6MAB0 UPF0758 protein pc1765 n=1 Tax=Candidatus Protoc... 137 4e-31 UniRef50_A6TQH8 UPF0758 protein Amet_2289 n=54 Tax=cellular orga... 136 4e-31 UniRef50_Q5DY97 DNA repair protein RadC n=17 Tax=Proteobacteria ... 136 4e-31 UniRef50_C4Z083 DNA repair protein RadC n=1 Tax=Eubacterium elig... 136 6e-31 UniRef50_B9L1S0 DNA repair protein radC homolog n=4 Tax=Bacteria... 136 6e-31 UniRef50_Q0F0W4 DNA repair protein RadC n=1 Tax=Mariprofundus fe... 135 8e-31 UniRef50_C5NXB5 DNA repair protein RadC homolog n=1 Tax=Gemella ... 135 9e-31 UniRef50_C4V569 DNA repair protein RadC n=2 Tax=Selenomonas RepI... 135 1e-30 UniRef50_B5YDI9 DNA repair protein n=2 Tax=Dictyoglomus RepID=B5... 134 2e-30 UniRef50_A6QHJ5 UPF0758 protein NWMN_1555 n=52 Tax=Staphylococcu... 134 2e-30 UniRef50_Q8DI83 UPF0758 protein tlr1707 n=31 Tax=Cyanobacteria R... 133 4e-30 UniRef50_A1BHA1 UPF0758 protein Cpha266_1761 n=11 Tax=Chlorobiac... 133 4e-30 UniRef50_C5SDF8 DNA repair protein RadC n=1 Tax=Allochromatium v... 133 4e-30 UniRef50_B5Y6A0 UPF0758 protein COPRO5265_1522 n=1 Tax=Coprother... 133 4e-30 UniRef50_C0Q9Z9 RadC3 n=1 Tax=Desulfobacterium autotrophicum HRM... 133 5e-30 UniRef50_UPI0001BC32AB DNA repair protein RadC n=1 Tax=Butyrivib... 133 5e-30 UniRef50_Q2S8K4 DNA repair protein n=1 Tax=Hahella chejuensis KC... 132 6e-30 UniRef50_C8VVH2 DNA repair protein RadC n=1 Tax=Desulfotomaculum... 132 6e-30 UniRef50_Q9KUK8 UPF0758 protein VC_0510 n=11 Tax=Gammaproteobact... 132 6e-30 UniRef50_A0Z2T6 DNA repair protein RadC n=1 Tax=marine gamma pro... 132 9e-30 UniRef50_A5EYF9 Response regulator receiver domain protein-DNA r... 132 1e-29 UniRef50_P52140 UPF0758 protein yfjY n=148 Tax=Enterobacteriacea... 132 1e-29 UniRef50_C5V0A3 DNA repair protein RadC n=1 Tax=Gallionella ferr... 131 2e-29 UniRef50_B1H050 DNA repair protein RadC n=1 Tax=uncultured Termi... 130 2e-29 UniRef50_UPI00016B261F DNA repair protein RadC n=2 Tax=candidate... 130 2e-29 UniRef50_D0MFA0 DNA repair protein RadC n=1 Tax=Rhodothermus mar... 130 3e-29 UniRef50_Q6AQC9 Related to DNA repair protein RadC n=4 Tax=Delta... 130 4e-29 UniRef50_B8FHA4 DNA repair protein RadC n=1 Tax=Desulfatibacillu... 130 5e-29 UniRef50_C6LCB9 DNA repair protein RadC n=3 Tax=Clostridiales Re... 129 5e-29 UniRef50_C4LDH2 DNA repair protein RadC n=2 Tax=Aeromonadaceae R... 129 5e-29 UniRef50_C7M9C6 DNA repair protein RadC n=1 Tax=Capnocytophaga o... 129 6e-29 UniRef50_A5URD0 UPF0758 protein RoseRS_0767 n=7 Tax=Bacteria Rep... 129 9e-29 UniRef50_A4SUN7 DNA repair protein n=2 Tax=Aeromonas salmonicida... 129 1e-28 UniRef50_C0BM81 DNA repair protein RadC n=2 Tax=Bacteroidetes Re... 128 1e-28 UniRef50_Q7VMM9 Conserved possible DNA repair protein n=1 Tax=Ha... 128 1e-28 UniRef50_D1N9M0 DNA repair protein RadC n=1 Tax=Victivallis vade... 128 1e-28 UniRef50_Q2FT43 UPF0758 protein Mhun_2739 n=5 Tax=Archaea RepID=... 128 1e-28 UniRef50_B9MPC4 DNA repair protein RadC n=2 Tax=Clostridia RepID... 128 2e-28 UniRef50_B0RXB0 DNA repair protein radC homolog n=3 Tax=Xanthomo... 127 2e-28 UniRef50_A6SWN0 DNA repair protein RadC n=14 Tax=Proteobacteria ... 127 2e-28 UniRef50_Q3BQ28 RadC family DNA repair protein n=5 Tax=Xanthomon... 127 2e-28 UniRef50_B0T9F0 DNA repair protein RadC n=1 Tax=Caulobacter sp. ... 127 3e-28 UniRef50_Q5E054 DNA repair protein RadC n=3 Tax=Gammaproteobacte... 127 3e-28 UniRef50_C9LLN8 DNA repair protein RadC n=1 Tax=Dialister invisu... 127 3e-28 UniRef50_A6GHT1 DNA repair protein RadC n=1 Tax=Plesiocystis pac... 126 5e-28 UniRef50_Q3JDF2 DNA repair protein RadC n=4 Tax=Gammaproteobacte... 126 5e-28 UniRef50_A9NF52 DNA repair protein n=1 Tax=Acholeplasma laidlawi... 126 5e-28 UniRef50_B0S3Y4 UPF0758 protein FMG_0357 n=2 Tax=Finegoldia magn... 126 6e-28 UniRef50_Q0AJV4 DNA repair protein RadC n=18 Tax=Proteobacteria ... 125 8e-28 UniRef50_Q0ACW7 DNA repair protein RadC n=2 Tax=Proteobacteria R... 125 9e-28 UniRef50_UPI0001C34E02 DNA repair protein RadC n=1 Tax=Clostridi... 125 9e-28 UniRef50_A7GTD5 DNA repair protein RadC n=3 Tax=Bacillaceae RepI... 125 1e-27 UniRef50_B7ANR2 Putative uncharacterized protein n=1 Tax=Bactero... 125 1e-27 UniRef50_UPI000185C66E DNA repair protein RadC n=1 Tax=Capnocyto... 125 1e-27 UniRef50_A1UT15 DNA repair protein, RadC family n=3 Tax=Bartonel... 125 1e-27 UniRef50_C4SWK5 DNA repair protein n=1 Tax=Yersinia intermedia A... 125 1e-27 UniRef50_B0N2U6 Putative uncharacterized protein n=3 Tax=Bacteri... 125 1e-27 UniRef50_Q18B06 UPF0758 protein CD1144 n=8 Tax=Clostridiaceae Re... 124 2e-27 UniRef50_Q8RF15 UPF0758 protein FN0909 n=11 Tax=Fusobacterium Re... 124 2e-27 UniRef50_B1JAY7 DNA repair protein RadC n=4 Tax=Pseudomonas RepI... 124 2e-27 UniRef50_Q2S042 UPF0758 protein SRU_2338 n=1 Tax=Salinibacter ru... 123 4e-27 UniRef50_UPI0001BC61BD DNA repair protein radC n=3 Tax=Fusobacte... 123 5e-27 UniRef50_Q47ZW8 DNA repair protein, RadC family protein n=20 Tax... 123 5e-27 UniRef50_B2V8J4 DNA repair protein RadC n=5 Tax=Aquificales RepI... 122 7e-27 UniRef50_B4Y2Y7 RadC n=1 Tax=Aquabacterium sp. PL1F5 RepID=B4Y2Y... 122 9e-27 UniRef50_Q2G8R8 DNA repair protein RadC n=5 Tax=Sphingomonadales... 122 9e-27 UniRef50_A1TJG0 DNA repair protein RadC n=1 Tax=Acidovorax citru... 122 1e-26 UniRef50_Q2J299 UPF0758 protein RPB_0700 n=15 Tax=Alphaproteobac... 122 1e-26 UniRef50_C3WLA1 DNA repair protein radC n=2 Tax=Fusobacterium Re... 121 1e-26 UniRef50_Q1DAY3 DNA repair protein RadC n=1 Tax=Myxococcus xanth... 121 2e-26 UniRef50_A7FEQ9 DNA repair protein, RadC family n=4 Tax=Yersinia... 121 2e-26 UniRef50_A8ZUS2 DNA repair protein RadC n=1 Tax=Desulfococcus ol... 120 3e-26 UniRef50_D1QST5 DNA repair protein RadC n=13 Tax=Bacteroidales R... 120 3e-26 UniRef50_UPI00016C0069 DNA repair protein RadC n=1 Tax=Epulopisc... 120 5e-26 UniRef50_D0LGP2 DNA repair protein RadC n=1 Tax=Haliangium ochra... 120 5e-26 UniRef50_Q1RK76 DNA repair protein RadC n=11 Tax=Rickettsia RepI... 119 5e-26 UniRef50_A5FMW5 UPF0758 protein Fjoh_0413 n=33 Tax=Bacteroidetes... 119 6e-26 UniRef50_B1ZYU3 DNA repair protein RadC n=3 Tax=Verrucomicrobia ... 119 7e-26 UniRef50_Q7MVX9 UPF0758 protein PG_0894 n=24 Tax=Bacteroidales R... 119 8e-26 UniRef50_B1C9I2 Putative uncharacterized protein n=1 Tax=Anaerof... 118 1e-25 UniRef50_C1SJ65 DNA repair protein radc n=1 Tax=Denitrovibrio ac... 118 1e-25 UniRef50_Q8VR59 Putative intergenic-region protein n=24 Tax=Esch... 118 1e-25 UniRef50_C6BYC2 DNA repair protein RadC n=1 Tax=Desulfovibrio sa... 118 2e-25 UniRef50_A0L491 DNA repair protein RadC n=4 Tax=Bacteria RepID=A... 117 2e-25 UniRef50_A1K759 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=... 117 2e-25 UniRef50_Q4QPE3 Putative DNA repair radC-like protein n=5 Tax=Ha... 117 3e-25 UniRef50_B1HKP9 DNA repair protein n=1 Tax=Burkholderia pseudoma... 117 4e-25 UniRef50_Q0BRK0 DNA repair protein radC n=5 Tax=Alphaproteobacte... 117 4e-25 UniRef50_Q8UEZ6 UPF0758 protein Atu1607 n=100 Tax=Alphaproteobac... 116 5e-25 UniRef50_A9IEU5 Putative DNA repair protein n=1 Tax=Bordetella p... 115 8e-25 UniRef50_B4S9N8 DNA repair protein RadC n=1 Tax=Prosthecochloris... 115 9e-25 UniRef50_C4TZV7 DNA repair protein radC n=2 Tax=Enterobacteriace... 115 1e-24 UniRef50_C9NPT2 DNA repair protein RadC n=1 Tax=Vibrio coralliil... 115 1e-24 UniRef50_Q73P26 DNA repair protein RadC n=2 Tax=Treponema RepID=... 115 2e-24 UniRef50_C9LCX8 DNA repair protein RadC n=1 Tax=Prevotella tanne... 114 2e-24 UniRef50_C9BR87 DNA repair protein RadC n=4 Tax=Enterococcus fae... 114 2e-24 UniRef50_A9KL05 DNA repair protein RadC n=7 Tax=Clostridiales Re... 114 2e-24 UniRef50_C2MB02 DNA repair protein RadC n=1 Tax=Porphyromonas ue... 114 3e-24 UniRef50_Q5FNC4 DNA repair protein RadC n=1 Tax=Gluconobacter ox... 114 3e-24 UniRef50_A7VWV8 Putative uncharacterized protein n=1 Tax=Clostri... 113 4e-24 UniRef50_D1PFM8 DNA repair protein RadC n=1 Tax=Prevotella copri... 113 5e-24 UniRef50_Q6TFX1 ORF25 n=3 Tax=Enterobacteriaceae RepID=Q6TFX1_ERWAM 113 5e-24 UniRef50_B8KQ45 DNA repair protein RadC n=1 Tax=gamma proteobact... 113 5e-24 UniRef50_D2RM81 DNA repair protein RadC n=2 Tax=Acidaminococcus ... 113 5e-24 UniRef50_C0BG63 DNA repair protein RadC n=1 Tax=Flavobacteria ba... 112 6e-24 UniRef50_C1A4H3 DNA repair protein RadC n=1 Tax=Gemmatimonas aur... 112 7e-24 UniRef50_B9QT39 DNA repair protein RadC n=1 Tax=Labrenzia alexan... 112 7e-24 UniRef50_B8KU95 DNA repair protein RadC n=1 Tax=gamma proteobact... 112 7e-24 UniRef50_C4GB45 Putative uncharacterized protein n=1 Tax=Shuttle... 112 8e-24 UniRef50_D2NHT0 Putative phage DNA repair protein n=1 Tax=Escher... 112 9e-24 UniRef50_D1BNF1 DNA repair protein RadC n=3 Tax=Veillonella RepI... 110 3e-23 UniRef50_D2EK65 DNA repair protein n=1 Tax=Pediococcus acidilact... 110 3e-23 UniRef50_C9RLS9 DNA repair protein RadC n=1 Tax=Fibrobacter succ... 110 3e-23 UniRef50_C2E2B4 DNA repair protein RadC n=8 Tax=Lactobacillus je... 110 3e-23 UniRef50_C5SK46 DNA repair protein RadC n=1 Tax=Asticcacaulis ex... 110 4e-23 UniRef50_B8H0Z9 DNA repair protein radC n=1 Tax=Caulobacter cres... 110 4e-23 UniRef50_B8J197 DNA repair protein RadC n=4 Tax=Desulfovibrio Re... 110 4e-23 UniRef50_Q1WT78 DNA repair protein n=3 Tax=Lactobacillus RepID=Q... 110 4e-23 UniRef50_A6GTQ1 DNA repair protein RadC (Fragment) n=1 Tax=Limno... 110 4e-23 UniRef50_B0T9R6 DNA repair protein RadC n=4 Tax=Alphaproteobacte... 109 5e-23 UniRef50_B2KEG6 DNA repair protein RadC n=1 Tax=Elusimicrobium m... 109 6e-23 UniRef50_Q2IG79 DNA repair protein RadC n=8 Tax=Anaeromyxobacter... 109 6e-23 UniRef50_D1Y6L3 DNA repair protein RadC n=1 Tax=Pyramidobacter p... 109 7e-23 UniRef50_C1QC41 DNA repair protein n=2 Tax=Brachyspira RepID=C1Q... 109 8e-23 UniRef50_Q1MS20 DNA repair proteins n=3 Tax=Desulfovibrionaceae ... 108 9e-23 UniRef50_C0GMV6 DNA repair protein RadC n=1 Tax=Desulfonatronosp... 108 1e-22 UniRef50_A9I305 DNA repair protein radC homolog n=3 Tax=Proteoba... 108 1e-22 UniRef50_Q02HM7 Putative uncharacterized protein n=1 Tax=Pseudom... 108 2e-22 UniRef50_Q2SAN5 DNA repair protein n=2 Tax=Hahella chejuensis KC... 107 2e-22 UniRef50_D1W0Q6 Putative DNA repair protein RadC n=2 Tax=Prevote... 107 2e-22 UniRef50_D1AWS8 DNA repair protein RadC n=1 Tax=Streptobacillus ... 107 3e-22 UniRef50_A0LNF4 DNA repair protein RadC n=1 Tax=Syntrophobacter ... 107 3e-22 UniRef50_C0R2T1 DNA repair protein RadC n=7 Tax=Wolbachia RepID=... 107 3e-22 UniRef50_Q03EP2 DNA repair protein n=1 Tax=Pediococcus pentosace... 107 3e-22 UniRef50_Q48AG2 DNA repair protein RadC, n-terminal n=1 Tax=Colw... 107 3e-22 UniRef50_B0PEI5 Putative uncharacterized protein n=1 Tax=Anaerot... 106 4e-22 UniRef50_Q7UL21 DNA repair protein n=4 Tax=Bacteria RepID=Q7UL21... 105 8e-22 UniRef50_Q04B84 DNA repair protein n=2 Tax=Lactobacillus delbrue... 105 1e-21 UniRef50_A8ZTW3 DNA repair protein RadC n=5 Tax=Bacteria RepID=A... 105 1e-21 UniRef50_B0MUL4 Putative uncharacterized protein n=1 Tax=Alistip... 104 2e-21 UniRef50_Q47CZ3 DNA repair protein RadC n=2 Tax=Dechloromonas ar... 104 2e-21 UniRef50_C9M9H6 DNA repair protein RadC n=1 Tax=Jonquetella anth... 104 2e-21 UniRef50_A9GNT0 DNA repair protein n=1 Tax=Sorangium cellulosum ... 104 2e-21 UniRef50_A0R7V6 DNA repair protein RadC n=5 Tax=Desulfuromonadal... 103 4e-21 UniRef50_C6XNR3 DNA repair protein RadC n=1 Tax=Hirschia baltica... 103 5e-21 UniRef50_C6J5M2 DNA repair protein RadC n=1 Tax=Paenibacillus sp... 103 5e-21 UniRef50_C7NDB9 DNA repair protein RadC n=4 Tax=Fusobacteriaceae... 103 6e-21 UniRef50_C3WF45 Putative uncharacterized protein n=1 Tax=Fusobac... 102 1e-20 UniRef50_A2SPN1 DNA repair protein RadC n=1 Tax=Methanocorpuscul... 102 1e-20 UniRef50_C7JGI7 DNA repair protein RadC n=8 Tax=Acetobacter past... 100 2e-20 UniRef50_Q2GL92 DNA repair protein RadC n=12 Tax=Rickettsiales R... 100 3e-20 UniRef50_C0R372 DNA repair protein RadC, putative n=11 Tax=Wolba... 100 4e-20 UniRef50_A4J365 DNA repair protein RadC n=1 Tax=Desulfotomaculum... 100 5e-20 UniRef50_Q3A6E7 DNA repair protein, RadC-like n=3 Tax=Desulfurom... 99 7e-20 UniRef50_Q042N7 DNA repair protein n=7 Tax=Lactobacillus RepID=Q... 99 9e-20 UniRef50_C0R3D5 DNA repair protein RadC n=2 Tax=Wolbachia RepID=... 99 1e-19 UniRef50_C1TLK8 DNA repair protein radc n=1 Tax=Dethiosulfovibri... 99 1e-19 UniRef50_A9HJN5 DNA repair protein RadC n=1 Tax=Gluconacetobacte... 98 2e-19 UniRef50_Q2B8H5 Putative uncharacterized protein n=1 Tax=Bacillu... 98 2e-19 UniRef50_Q0GNI5 Smu18B n=1 Tax=uncultured organism RepID=Q0GNI5_... 98 2e-19 UniRef50_B4RG10 DNA repair protein RadC n=1 Tax=Phenylobacterium... 97 3e-19 UniRef50_Q2GEH3 DNA repair protein RadC n=2 Tax=Neorickettsia Re... 97 3e-19 UniRef50_Q0FHF8 DNA repair protein RadC n=1 Tax=Roseovarius sp. ... 97 4e-19 UniRef50_C0GR82 DNA repair protein RadC n=2 Tax=Desulfonatronosp... 97 4e-19 UniRef50_C7H3R5 Putative DNA repair protein RadC n=1 Tax=Faecali... 97 4e-19 >UniRef50_B5EXE3 UPF0758 protein yicR n=116 Tax=Enterobacteriaceae RepID=YICR_SALA4 Length = 221 Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust. Identities = 180/215 (83%), Positives = 206/215 (95%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 L+PREKML+ GI++L+DVELLALFLRTGT GKDV+TLAKE+L++FGSLYGLL++++ QF Sbjct: 7 LLPREKMLRSGIASLSDVELLALFLRTGTPGKDVMTLAKEILQHFGSLYGLLSADFAQFR 66 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 GV+GIG+AKFAQLKGIAELARRYY+VRM EES LLSPEMTREFLQSQLTGEEREIF+VIF Sbjct: 67 GVNGIGLAKFAQLKGIAELARRYYSVRMNEESALLSPEMTREFLQSQLTGEEREIFLVIF 126 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 LD+QHRV+ H RLFSGTLNHVEVHPREI+REAIK+NASA+ILAHNHPSGCAEPSKADKLI Sbjct: 127 LDAQHRVLQHSRLFSGTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADKLI 186 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 TER+IK CQFMD+RVLDH++IGRGEYVSFAERGWI Sbjct: 187 TERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 221 >UniRef50_A4W511 UPF0758 protein Ent638_0101 n=3 Tax=Enterobacteriaceae RepID=Y101_ENT38 Length = 221 Score = 347 bits (890), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 160/215 (74%), Positives = 192/215 (89%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 L+PREKML FGI++LTD ELLALFLRTGT GK V LA+E+L++FGSL+GLL + ++F Sbjct: 7 LLPREKMLSFGITSLTDAELLALFLRTGTSGKSVFVLAQELLQHFGSLHGLLNANLDEFR 66 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 V GIG+AK+AQLKGIAELARRY++VR+ ++PLLSPEMT++FLQSQL+ ERE+FMVIF Sbjct: 67 YVEGIGLAKYAQLKGIAELARRYHSVRVLGDNPLLSPEMTKDFLQSQLSDAEREVFMVIF 126 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 LD+QHRV+ H R+FSGTL HVEVHPREI+REAIK+NA+A+ILAHNHPSGCAEPSKADK I Sbjct: 127 LDNQHRVVKHSRMFSGTLRHVEVHPREIVREAIKVNAAAVILAHNHPSGCAEPSKADKDI 186 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 TERIIK CQFMD+ VLDH +IGRGEYVSFAE+GWI Sbjct: 187 TERIIKCCQFMDIHVLDHFIIGRGEYVSFAEQGWI 221 >UniRef50_A7MQ95 UPF0758 protein ESA_04094 n=32 Tax=Bacteria RepID=Y4094_ENTS8 Length = 230 Score = 312 bits (800), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 142/213 (66%), Positives = 183/213 (85%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PREK++++G + L+D ELLA+FLRTGT G DV+TLAK +L +FGSLYGLL+++ F + Sbjct: 18 PREKLMRYGAADLSDEELLAIFLRTGTPGMDVMTLAKRLLAHFGSLYGLLSADIRPFRDI 77 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+G+AK+AQLK I ELARRYY R EE+ LLSP +TR+FL+SQL +ERE+F+VIFLD Sbjct: 78 GGVGMAKYAQLKAIGELARRYYRSRPCEETALLSPTITRDFLESQLAEQEREVFLVIFLD 137 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 SQ+R+I LF+GTL+HVEVHPREI+REA+++NA+ +ILAHNHPSG AEPS+ADK++TE Sbjct: 138 SQNRIIRQNTLFTGTLSHVEVHPREIVREAVRLNAAGIILAHNHPSGRAEPSRADKMVTE 197 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 RI+KSCQ +D+RVLDH+VIGRGEYVSFAERGWI Sbjct: 198 RIVKSCQLVDIRVLDHLVIGRGEYVSFAERGWI 230 >UniRef50_A5UDB6 UPF0758 protein CGSHiEE_07200 n=30 Tax=Gammaproteobacteria RepID=Y7200_HAEIE Length = 221 Score = 232 bits (592), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 111/222 (50%), Positives = 158/222 (71%), Gaps = 1/222 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 M+NN L MPREK+L G AL+D ELLA+FLRTG +G V++L+K +L +FGSL+ LL+ Sbjct: 1 MENNDDL-MPREKLLASGAKALSDYELLAIFLRTGIKGCPVISLSKNVLTHFGSLHALLS 59 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 S+ + F V G+G+ +F QL+ I E+ +RY M + PE + FL ++L EER Sbjct: 60 SDKKAFCSVKGLGITQFIQLQAITEMTKRYLKQEMLSTPIINDPETVKLFLLTELQHEER 119 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E+FMV+FLD+QHR+I RLF GT+N V+PREII+EA+ NA+ALILAHNHPSG EP Sbjct: 120 EVFMVLFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGVTEP 179 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S +D+LIT++I + + M++ VLDH+++G+ + SFAE + Sbjct: 180 SYSDQLITKKIQDAAELMEICVLDHLIVGKSDCYSFAENCLL 221 >UniRef50_B0UUW7 UPF0758 protein HSM_0009 n=10 Tax=Pasteurellaceae RepID=Y009_HAES2 Length = 222 Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 106/222 (47%), Positives = 155/222 (69%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 M + LMPREK+LK+G S+L D ELLA+FLRTG + V+ L++ +L +F SL GL+ Sbjct: 1 MTQQNTTLMPREKLLKYGASSLDDKELLAIFLRTGIKNCPVMQLSELVLAHFSSLRGLIN 60 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 ++ + F + G+G+ +F QL+ E+ +RY ++ SP+ R +LQ++L ++R Sbjct: 61 ADQKHFCQMKGLGITQFVQLQACTEMTKRYLLQELQFAQEFTSPDTVRMYLQTELENKDR 120 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 EIFMV+FLD+QHR+I +F GT+N V+PREII+ A+ NA+ALILAHNHPSG + P Sbjct: 121 EIFMVLFLDNQHRLIKKEEMFLGTINQANVYPREIIKTALFCNAAALILAHNHPSGVSTP 180 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S AD+ +TE I + + M++RVLDH +IG+G Y SFAE+GWI Sbjct: 181 SMADRKMTENIKQLSELMEIRVLDHFIIGKGNYFSFAEQGWI 222 >UniRef50_A1SR15 UPF0758 protein Ping_0056 n=2 Tax=Gammaproteobacteria RepID=Y056_PSYIN Length = 225 Score = 206 bits (524), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 142/213 (66%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PREK+L+ G +AL+D ELLA+FLRTG RG DV+TL+K++L FGSL+ L + F Sbjct: 13 PREKLLQKGTAALSDAELLAIFLRTGCRGVDVVTLSKQLLSQFGSLHALFAASESDFCEK 72 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+G AK+ QL+ + E++ RY + + + L S T+ FL +++ E+F I LD Sbjct: 73 KGLGQAKYVQLQAVLEMSSRYLQEPLSKGNALTSAAQTKAFLIAKMHNLPYEVFAAILLD 132 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 +QHR+I F G+++ VHPR I ++ + NA+A+IL HNHPSG S+ADK+IT+ Sbjct: 133 TQHRIIRFHEFFFGSIDCATVHPRIIAQKVLSENAAAIILVHNHPSGDPSASEADKMITQ 192 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +I+ + Q +D+RVLDH+V+G + SFAE GWI Sbjct: 193 KIVSALQLIDVRVLDHLVVGHKKCTSFAENGWI 225 >UniRef50_Q5WTW4 UPF0758 protein lpl2409 n=6 Tax=Legionella RepID=Y2409_LEGPL Length = 227 Score = 189 bits (481), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 92/218 (42%), Positives = 141/218 (64%), Gaps = 1/218 (0%) Query: 5 SQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYE 64 +Q L REK+L G+ +L+D+ELLA+F+ +G K L LA E+ ++ G+L +L ++ + Sbjct: 7 AQQLDLREKLLTNGVHSLSDIELLAVFISSGNNKKSCLQLAYELTKHLGNLRNILNADLQ 66 Query: 65 QFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFM 124 F +HG+G ++AQL+ E+ R + +++E L + + T FL+ +L + E F Sbjct: 67 SFKSIHGLGEVRYAQLQAAKEICHRSDFIDLQKEIRLSNTQQTYAFLKKRLRDYKNETFA 126 Query: 125 VIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKAD 184 +FLD+QHR+I + LFSGT+N V+PR I+ +++NA+ALILAHNHPSG ++ S+ D Sbjct: 127 ALFLDNQHRIIAYEELFSGTINTATVYPRPIVERVLQLNAAALILAHNHPSGLSDASQQD 186 Query: 185 KLITERIIKSCQFMDLRVLDHIVIGRGE-YVSFAERGW 221 ITERI + +D R+LDHIVIG E Y FAE W Sbjct: 187 LAITERIRDALDLVDARLLDHIVIGDNEVYSIFAENKW 224 >UniRef50_Q21TE2 UPF0758 protein Rfer_3252 n=12 Tax=cellular organisms RepID=Y3252_RHOFD Length = 234 Score = 189 bits (479), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 91/223 (40%), Positives = 142/223 (63%), Gaps = 10/223 (4%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLE----------NFGSLYGLL 59 PREK+L G AL+DVELLA+ LRTG +GK VL +A+E+LE F + GLL Sbjct: 12 PREKLLARGPGALSDVELLAVLLRTGIKGKGVLQMARELLELKKSGSDDNDGFDGIAGLL 71 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 + + + G+G AK A+L + EL+RR +++E + +P+ + +LQ L + Sbjct: 72 HATSDDLKRIKGLGPAKRAELVAVLELSRRALAQQLKERTIFATPDAVKHYLQLHLAAKP 131 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 E+F V+FLD Q+R++ LF GTL V+PRE++ A+ AS+++LAHNHPSG + Sbjct: 132 HEVFAVLFLDVQNRLLALEELFRGTLTQTSVYPREVVLRALHHQASSVVLAHNHPSGTVQ 191 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS+AD+++T+ + + +D+RVLDH+++ GE +S AERG + Sbjct: 192 PSRADEMLTQTLKTTLALIDVRVLDHVIVAPGEALSMAERGLL 234 >UniRef50_C9Y8Q3 DNA repair protein radC homolog n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8Q3_9BURK Length = 239 Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 93/228 (40%), Positives = 139/228 (60%), Gaps = 15/228 (6%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLE---------------NFGS 54 PREK+L G AL+D ELLA+ LRTG GK VL +A+E+L+ FG Sbjct: 12 PREKLLARGAGALSDAELLAILLRTGIAGKGVLQMAEELLQLKNDSASRTVDGRQGGFGG 71 Query: 55 LYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQ 114 + GLL + + V G+G AK A++ + ELARR R++E P+ + +LQ Sbjct: 72 IAGLLHATADDLKHVKGLGPAKRAEIVAVLELARRAMAQRLQEREVFADPQAVKHYLQLH 131 Query: 115 LTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHP 174 L + E+F V+FLDSQ++++ LF GTL V+PRE++ A+ A+A++LAHNHP Sbjct: 132 LAAKGHEVFAVLFLDSQNKLLAMEELFRGTLTQTSVYPREVVIRALHHGAAAVVLAHNHP 191 Query: 175 SGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 SG +PS+AD+ +T+ + + +D+RVLDHI++G G+ +S AE G I Sbjct: 192 SGSVQPSRADEALTQTLKAALALVDVRVLDHIIVGPGQALSMAETGLI 239 >UniRef50_Q31EB6 UPF0758 protein Tcr_1917 n=5 Tax=Gammaproteobacteria RepID=Y1917_THICR Length = 225 Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 139/212 (65%), Gaps = 1/212 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PREK+LKFG L+D ELLA+FLR G +GK + LA+++L++FGSL LL ++ F Sbjct: 12 PREKLLKFGAPHLSDAELLAIFLRVGVKGKSAVELAQDLLDHFGSLERLLNADEAAFCEA 71 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+G AK+ QLK + E++RR++ +++ L PE LQ + + REIF ++ LD Sbjct: 72 KGLGQAKYVQLKAVLEMSRRHFESGLKKGEALTQPEKVARLLQHHIGHQSREIFGLVLLD 131 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 Q++ I LF+GT+N VH RE+++ + +A+A+ILAHNHPSG PS++D+ +T Sbjct: 132 QQNQFIQFVPLFTGTINQATVHIREVLKTVLDHHAAAVILAHNHPSGDPTPSQSDRDLTH 191 Query: 190 RIIKSCQFMDLRVLDHIVIG-RGEYVSFAERG 220 +I + Q ++ R LDHI++G G + SF ++G Sbjct: 192 QIQQGLQLIETRCLDHIILGDHGRWYSFTQQG 223 >UniRef50_Q46XP0 UPF0758 protein Reut_A2732 n=12 Tax=Proteobacteria RepID=Y2732_RALEJ Length = 228 Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 90/211 (42%), Positives = 135/211 (63%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PREK+ + G +AL+D ELLA+FLR G GK + LA++++ FGSL L T++ G+ Sbjct: 12 PREKLQECGAAALSDAELLAVFLRVGATGKSAVELARDLMVRFGSLTRLFTADARAVLGI 71 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+G AK+ QL+ + ELARR + S L SP R +L+ L +E+F+ +FLD Sbjct: 72 RGMGEAKYTQLQAVPELARRMLAESLELPSGLDSPAAVRSYLRLTLAPLAQEVFVCLFLD 131 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 +++R+I LF GTLN V+PRE+ R A+ NA+++I+AHNHPSGC PS++D +T Sbjct: 132 TRNRMIASEELFRGTLNQTAVYPREVARRALAHNAASVIVAHNHPSGCCTPSQSDLQMTR 191 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 + ++ +D+R+LDH V+ SFAE G Sbjct: 192 MLARALDLIDVRLLDHFVVAGTHVHSFAEHG 222 >UniRef50_D1JB12 Probable DNA repair protein radC homolog n=2 Tax=uncultured archaeon RepID=D1JB12_9ARCH Length = 330 Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 89/211 (42%), Positives = 130/211 (61%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PREK+L +G S LT ELLA+FLR+G GK + +A ++L FG + G+ ++ + + Sbjct: 99 PREKLLTYGSSKLTTSELLAIFLRSGIPGKSAIVIANDLLTQFGGVKGIFEADKAKLMDI 158 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+G AK AQ+K + LA Y M+ S + + + ++L + + EIF VIFLD Sbjct: 159 EGVGAAKVAQIKAVQALAEEYLKESMKSVSKVRNSKEVFDYLYLTMRDLKIEIFKVIFLD 218 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 S ++ I LF GTLN V+PREI++ A+ NA++LI HNHPSG PS +D+ ITE Sbjct: 219 SANQTIDDENLFEGTLNASSVYPREIVKSAVNKNAASLIFVHNHPSGDPTPSGSDRAITE 278 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 +I +C + + VLDHI+IG Y SFA+ G Sbjct: 279 DLIYACNLVQITVLDHIIIGDNVYFSFADEG 309 >UniRef50_Q4UPP0 UPF0758 protein XC_3944 n=35 Tax=Proteobacteria RepID=Y3944_XANC8 Length = 225 Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 86/213 (40%), Positives = 132/213 (61%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PREK+L G + L+D ELLA+F+ +G RG+D + A+++L G L LL + + + Sbjct: 12 PREKLLARGAAVLSDAELLAIFVGSGLRGQDAVRTARDLLHRHGPLRCLLDRPAKALARL 71 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+G A +L ELA R+ + L P + +L E+F +FLD Sbjct: 72 PGLGPASACKLSAALELANRHLLSDLERGEALSDPSSVGRYFSQRLRARNYEVFAALFLD 131 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 S+HR I LF+GT++ E+HPRE++R A+ NA+A+++ HNHPSG EPS+AD+ +T+ Sbjct: 132 SRHRAIAFEELFTGTIDAAEIHPREVVRRALLHNAAAVVVGHNHPSGNPEPSEADRAVTQ 191 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 R++++ +D+R+LDH VIG G VS AERGW+ Sbjct: 192 RLLQALGLVDIRLLDHFVIGDGRPVSLAERGWV 224 >UniRef50_B2UAP0 UPF0758 protein Rpic_2712 n=3 Tax=Burkholderiaceae RepID=Y2712_RALPJ Length = 224 Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 90/211 (42%), Positives = 133/211 (63%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PREK+L G +AL+D ELLA+FLR G GK + LA+E+L +FGSL L + ++FS + Sbjct: 12 PREKLLAHGPAALSDAELLAIFLRVGVPGKSAVDLARELLAHFGSLARLCHASQQEFSSI 71 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 +G+G AK+AQL + E+ARR + S + ++FL+ L E+F FLD Sbjct: 72 NGMGPAKYAQLHALLEVARRALKEDFTQGQTFESAQSVKDFLRLTLGHRPHEVFACFFLD 131 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 +HR+I LF GTL V+PREI + A+ NA+A+ILAHNHP+G EPS++D ++T Sbjct: 132 VRHRLIAWEELFRGTLTEARVYPREIAKRALHHNAAAVILAHNHPTGNTEPSESDVILTR 191 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 + ++ +D+ VLDH+++GR F E G Sbjct: 192 ELCRALAMLDVIVLDHMIVGRNHVYGFLEHG 222 >UniRef50_B2FJW1 UPF0758 protein Smlt0399 n=129 Tax=Proteobacteria RepID=Y399_STRMK Length = 234 Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 93/214 (43%), Positives = 137/214 (64%), Gaps = 1/214 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PREK++ G +AL+D ELLALFL +G G+D + A+++L+ G L LL + + + Sbjct: 12 PREKLIARGPTALSDAELLALFLGSGFGGRDAVQTARDLLQAHGPLRVLLDRPAAELARL 71 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMRE-ESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 G+G A+ L ELA RY + E+ +P +LQ +L G+ RE+FM +FL Sbjct: 72 PGLGPARSCTLAAGLELAHRYLAAELEHGEAVGNNPAAVGRYLQHRLRGQAREVFMALFL 131 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 D++HR+I LF GT+N V+PRE++R A+ NA+A+IL+HNHPSG EPS AD IT Sbjct: 132 DNRHRLIACEELFHGTINAAPVYPREVVRRALLHNAAAVILSHNHPSGDPEPSSADTRIT 191 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + + ++ +D+R+LDH V+G G VSFAERG + Sbjct: 192 DELQQALAMVDVRLLDHFVVGEGRPVSFAERGLL 225 >UniRef50_Q4FQM6 UPF0758 protein Psyc_1834 n=3 Tax=Moraxellaceae RepID=Y1834_PSYA2 Length = 227 Score = 182 bits (461), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 86/210 (40%), Positives = 134/210 (63%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PREK+LKFG + L+D E+LA+FLRTGT+ + + LA+ ++E FGSL LL + E Sbjct: 12 PREKLLKFGAAHLSDAEILAIFLRTGTQSQSAIDLARHLIEQFGSLAELLAAPQETVLAC 71 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 HGIG AK+AQ+ E+ RRY + +++ L +M ++++ + L GE RE+F V+ LD Sbjct: 72 HGIGPAKYAQILASLEIGRRYLDSQLKTGQGLGRSQMVKDYISTHLRGEPREVFAVLCLD 131 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 + +I LF+G ++ V + ++R A+ S LI+AHNHP A PS AD L+T Sbjct: 132 NALNLINFEILFTGGISSCSVCIKHVLRHALSHATSQLIIAHNHPHTDATPSTADNLLTY 191 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAER 219 + K+C +DL ++DH+++GR E +S+AE Sbjct: 192 ELKKACDLIDLSLIDHVIVGRNETLSYAEN 221 >UniRef50_B5YIR9 DNA repair protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR9_THEYD Length = 224 Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 84/213 (39%), Positives = 137/213 (64%), Gaps = 1/213 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PRE+++K G AL+D +LLA+ LRTG+ GK V+ A E+L+NF L GL + + Sbjct: 13 PRERLIKHGAEALSDAQLLAIVLRTGSNGKTVIDTAIELLQNFRGLRGLEEASISELKSF 72 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+G+AK AQ+K EL +R + +E+ S E+ + +L G ++E+F+ + LD Sbjct: 73 KGLGIAKIAQIKASFELGKRALCEKSQEQF-FNSAEIVYNYFFPKLNGLKKEVFITLLLD 131 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 ++ R+I ++ GTLN +HPRE+ ++A+K +A A+IL HNHPSG PS+ D IT+ Sbjct: 132 TKLRLIREVKVSEGTLNQSLIHPREVFKDAVKESAYAVILIHNHPSGDPTPSEQDIEITK 191 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++ K+ + +++ +LDH++IG G+Y S ERG + Sbjct: 192 KLKKASEILEIPILDHVIIGSGKYFSMKERGVV 224 >UniRef50_Q3JV52 UPF0758 protein BURPS1710b_1139 n=75 Tax=Proteobacteria RepID=Y1139_BURP1 Length = 278 Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 89/214 (41%), Positives = 135/214 (63%) Query: 9 MPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSG 68 +PRE++L G +AL+D EL+AL L +G G DV LA +L FGSL LL + + F G Sbjct: 65 LPRERLLARGPAALSDAELVALLLGSGLPGHDVFALAHTLLARFGSLRALLDAAPDDFKG 124 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 + GIG A+ A L + ELARR + RE + SP ++L+ + RE+F+ +FL Sbjct: 125 LRGIGPARTAILVAVVELARRALAEKARERPLVDSPGAVDDYLRLLIGTRPREVFVCLFL 184 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 D++HR++ G+L + V+PREI+R A+ +NA+ALI+AHNHPSG PS AD+ +T Sbjct: 185 DARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADRRLT 244 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + + +D++++DH V+G + SFA+ GWI Sbjct: 245 RVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 278 >UniRef50_A9IU27 UPF0758 protein Bpet3149 n=5 Tax=Bordetella RepID=Y3149_BORPD Length = 225 Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 83/213 (38%), Positives = 131/213 (61%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PRE++L+ G ++L D ELLAL LRTGTRG+ + + ++L +G L GL + ++ + Sbjct: 13 PRERLLRHGPASLRDAELLALALRTGTRGRTAIDMGSQLLHRYGGLRGLFAASPQELMSL 72 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+G AK L I ELARR R+ + + P + + ++ L E + ++LD Sbjct: 73 PGLGAAKAGTLAAILELARRAAEERLMRQQAMSEPGSVKRYFKTALANCAVEHCLALYLD 132 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 SQ +IT L GTL V+PRE++REA++ +A+ALILAHNHPSG A+PS+AD+ T Sbjct: 133 SQLNLITSGELARGTLARASVYPREVVREALRHHAAALILAHNHPSGSAQPSQADRDFTR 192 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + ++ +++R+LDH+++ VS AE G + Sbjct: 193 HMQQALALVEIRLLDHLIVAGDTVVSMAELGLL 225 >UniRef50_Q6F7Z8 UPF0758 protein ACIAD3126 n=19 Tax=Proteobacteria RepID=Y3126_ACIAD Length = 271 Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 81/214 (37%), Positives = 137/214 (64%), Gaps = 1/214 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PRE++L G +L+D ELLA+FLRTG++ + LA+ M+++FG L + + ++ S Sbjct: 29 PRERLLHSGPESLSDAELLAIFLRTGSKQHSAVELARLMIQHFGGLNPVFDASLQELSHF 88 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREES-PLLSPEMTREFLQSQLTGEEREIFMVIFL 128 HGIG K+A L + EL RRY N +++ L S + ++L+ +L GE++E+F V+ L Sbjct: 89 HGIGTTKYAHLMAVKELGRRYLNHYFHQDALNLNSSRLVLDYLRYELLGEKQEVFAVLCL 148 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 DS+ R + ++LF G+LN + +R A++ +A +++AHNHP G AEPS AD +T Sbjct: 149 DSELRKLNFKKLFYGSLNACNISINHTLRYALQQHACHIVIAHNHPFGKAEPSAADLDLT 208 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++ ++CQ +++++LDH +I + SFAER + Sbjct: 209 HQLYQACQLVEIKLLDHFIIAKDGTFSFAERALL 242 >UniRef50_A8R890 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R890_9FIRM Length = 227 Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 85/213 (39%), Positives = 132/213 (61%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PREK L GI AL++ EL+AL LR GTR + VL LA E+L + SL L + + + Sbjct: 12 PREKALMHGIEALSNRELIALLLRNGTRSQSVLELADEVLNRYSSLGSLGQASLTELMEI 71 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 GI AK +L+ L +R ++E + SP+ E+L Q+ +++E F+V+FL+ Sbjct: 72 DGIKQAKAIELQAAFALGKRIAFDVLKESEAISSPQKLSEWLMQQIGFQQQEHFLVVFLN 131 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 +++++ ++ LF GTL VHPREI +EA++I + +I AHNHPSG + S AD IT+ Sbjct: 132 QRNQILAYKTLFVGTLTSANVHPREIFKEAMRIGCAKIICAHNHPSGNPQVSDADIAITQ 191 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +I++ Q + + +LDHIV+G YVS E G++ Sbjct: 192 QIMECGQLVSIPLLDHIVVGGNRYVSLREEGYM 224 >UniRef50_B2V090 UPF0758 protein CLH_0547 n=18 Tax=Clostridium RepID=Y547_CLOBA Length = 229 Score = 165 bits (418), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 81/214 (37%), Positives = 136/214 (63%), Gaps = 1/214 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 P+EK+L +G L + ELLA+ LRTGT+G++VL L+ +L F L G+L + + + + Sbjct: 16 PKEKLLSYGADTLNNSELLAIILRTGTKGENVLQLSNRLLSEFQGLDGILEASLDDITSI 75 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMRE-ESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 GI K +Q+ +AEL RR+ + + + ++SP + +++ ++EI VIFL Sbjct: 76 KGIKEGKASQILALAELFRRFRTFKSADRDIKIMSPNDIAMLINGEMSLLKQEILKVIFL 135 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 ++++ VI + +F G+LN VHPREI +EA+ +++ +I+ HNHPSG PSK D IT Sbjct: 136 NTKNIVIGTKDVFKGSLNTSIVHPREIFKEAVNKSSTKIIICHNHPSGDPTPSKEDINIT 195 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 RI + + M +++LDHI+IG+ ++S E+G+I Sbjct: 196 LRIKECGEIMGIQLLDHIIIGKNGFISLKEKGFI 229 >UniRef50_B3E339 UPF0758 protein Glov_0523 n=8 Tax=Desulfuromonadales RepID=Y523_GEOLS Length = 230 Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 85/216 (39%), Positives = 129/216 (59%), Gaps = 3/216 (1%) Query: 10 PREKMLKFGISALTDVELLALFLRTG--TRGKDVLTLAKEMLENF-GSLYGLLTSEYEQF 66 PREK+LK G +AL+D ELLAL LRTG GK + L +E+LE F G+L L +E + Sbjct: 15 PREKLLKRGAAALSDAELLALVLRTGDAAAGKSAIDLGRELLERFDGNLRELAQAELNEL 74 Query: 67 SGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVI 126 + G+G+AK A +K L +R+ R+ SP +F +L +E+F+ + Sbjct: 75 QQIKGLGLAKAASIKAAFTLGKRFQARRLETLERFTSPAQVFDFFHHELRDNRKELFLTL 134 Query: 127 FLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKL 186 LD ++R+ ++ G+LN VHPRE+ A++ +A+A+I HNHPSG PS+ D Sbjct: 135 LLDGKNRITRKVQVSEGSLNQSIVHPREVFAPAVRESAAAVIFIHNHPSGDPAPSREDHE 194 Query: 187 ITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 IT R+ ++ + + ++VLDHI+IG G Y SF E G + Sbjct: 195 ITRRLNEAGEILGIKVLDHIIIGDGAYFSFVESGLL 230 >UniRef50_A5ZRS6 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5ZRS6_9FIRM Length = 236 Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 87/218 (39%), Positives = 126/218 (57%), Gaps = 5/218 (2%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLEN-----FGSLYGLLTSEYE 64 P EK ++ G + L+D ELLA+ LR GTRG + LTLA ++L + + L GLL Sbjct: 14 PYEKCIREGENTLSDSELLAVILRCGTRGMNSLTLANDILSHMEQSPYPGLLGLLHCSVS 73 Query: 65 QFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFM 124 +HGIG K QLK I EL++R + R SP+ + QL +E+EI + Sbjct: 74 DLKKIHGIGTVKAVQLKCIGELSKRIASTAARISLDFNSPDSIAAYYMEQLRHQEQEIMI 133 Query: 125 VIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKAD 184 + LD+Q+ ++ L GT+N + PRE+ EA++ +A LIL HNHP G PSK D Sbjct: 134 CMMLDNQNHLLGDTMLSKGTVNATLITPREVYLEALRYHAVNLILIHNHPGGNPAPSKCD 193 Query: 185 KLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 K ITERI ++ + + + +LDHI+IG Y+SF E G + Sbjct: 194 KEITERICQAGEMLGINLLDHIIIGDHRYISFREEGLM 231 >UniRef50_D2BJ47 DNA repair protein n=5 Tax=Dehalococcoides RepID=D2BJ47_DEHSV Length = 275 Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 86/212 (40%), Positives = 124/212 (58%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 RE+ LK G+ L D E++ L L GT +D AKE +++FGSL +L + + + Sbjct: 31 RERFLKAGLDGLNDYEVVELLLTLGTPRRDCKQAAKEAIKHFGSLRAVLEASPAELLSIK 90 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 GIG L I E++RRY + E+ + + ++L + G ++E+F VI+LDS Sbjct: 91 GIGEVNSMALTLIREVSRRYLKDGIMEKPVCNTAQQVFDYLYCAMRGLKKEVFKVIYLDS 150 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 QHRV+ LF+GT+ + PRE+I AI NASALI HNHPSG EPS+ADK +T Sbjct: 151 QHRVLELADLFTGTVASGSIVPREVIAAAISQNASALIFVHNHPSGKIEPSQADKDVTRE 210 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++ + M +R LDHI+IG Y SFA G + Sbjct: 211 LVYAAMVMKIRALDHIIIGDNCYFSFAAAGIM 242 >UniRef50_C8N8A0 DNA repair protein RadC n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N8A0_9GAMM Length = 224 Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 89/215 (41%), Positives = 125/215 (58%), Gaps = 2/215 (0%) Query: 9 MPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSG 68 MPRE+ML G AL D ELLA+ LRTG++G +VL ++E+L G L GL S Sbjct: 10 MPRERMLHNGAQALADYELLAILLRTGSKGSNVLEFSRELLRGRGGLVGLFNSRAADLQA 69 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREES-PLLSPEMTREFLQSQLTGEEREIFMVIF 127 V G+G AK A++ + ELARR+ MR+ S + R++L Q G+ E F V+F Sbjct: 70 VRGLGKAKTAEILAVTELARRFMREEMRQPSWSFKTAADVRDYLLMQFKGQALEAFGVLF 129 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 L+ QH I RL +G V V R++I A+ +A+A+ILAHNHP+G PS D+ + Sbjct: 130 LNQQHGFIAFERLAAGAAAKVPVPVRQLIASALHHHAAAVILAHNHPAGSGAPSAEDRDV 189 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAER-GW 221 T + + MD+R+LDH ++ E VS ER GW Sbjct: 190 TRHLDDALALMDIRLLDHFIVAGNEMVSMRERGGW 224 >UniRef50_A5IM26 UPF0758 protein Tpet_1235 n=7 Tax=Thermotogaceae RepID=Y1235_THEP1 Length = 222 Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 90/223 (40%), Positives = 134/223 (60%), Gaps = 2/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENF-GSLYGLL 59 MK + L+PRE+M+K G +L+ EL+A+ LRTG +GK VL L+K++LE F GSL L Sbjct: 1 MKRDGGSLLPRERMIKAGPESLSVEELVAIVLRTGKKGKHVLELSKDLLERFDGSLIKLS 60 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 + E+ + V G+G+ K LK EL +R + R L S + Q ++ E Sbjct: 61 NAGLEEIASVEGVGMVKAITLKAALELGKRLHRELERIPEKLDSSVKVYRYCQ-EMVYLE 119 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 REI VI LD++ VI L GT + +HPR++ R AI+ NAS +I+ HNHPSG Sbjct: 120 REIVKVICLDTKLNVIGENTLTVGTSDRSLIHPRDVFRTAIRANASGVIVVHNHPSGDPT 179 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PSK D+LITER+ ++ + + + ++DH+++ R Y SF E G + Sbjct: 180 PSKEDRLITERLKQAGEILGVSLVDHVIVSRRGYFSFREEGEL 222 >UniRef50_B7C9V0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9V0_9FIRM Length = 224 Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 76/213 (35%), Positives = 131/213 (61%), Gaps = 1/213 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PREK L++G+ +L+D+EL+AL L++G + + V +A ++L+ L L+T + Sbjct: 12 PREKALRYGLESLSDLELVALILQSGNKNRSVFEIASDVLKESEGLSKLMTMHVNTLMQI 71 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 GI K QL EL++R ++ +P+L PE E+ + + +E F+ ++LD Sbjct: 72 QGIREVKALQLLASVELSKRVIKSKVYH-APILKPEDVIEWFKFEYGTMSQECFIALYLD 130 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 ++ ++I+HR LF GTLN VHPRE+ +EA NA+++++AHNHPSG PSKAD +T Sbjct: 131 TKSKLISHRVLFKGTLNESVVHPREVFKEAFLQNANSVLIAHNHPSGDCTPSKADFEVTY 190 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +++ M + ++DHI++ + +Y SF E ++ Sbjct: 191 KMVHVAMTMGVCLVDHIIVCKNQYYSFKEHKYL 223 >UniRef50_A9VIS8 UPF0758 protein BcerKBAB4_4299 n=107 Tax=Firmicutes RepID=Y4299_BACWK Length = 225 Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 78/213 (36%), Positives = 135/213 (63%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PRE++L G +L++ ELLA+ LRTG++ + VLTL+ +L +F L L + E+ + Sbjct: 13 PRERLLLEGAGSLSNRELLAVLLRTGSKEETVLTLSDNILHHFDGLRMLKDATLEEMMSI 72 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 HG+G+AK +QL EL RR + + + SPE ++ ++ ++E F+ ++L+ Sbjct: 73 HGVGIAKASQLMAAFELGRRMVRLEYQNRYSIRSPEDCASYMMEEMRFLQQEHFVCLYLN 132 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 ++++VI + +F G+LN VHPRE+ +EA + A+++I HNHPSG PS+ D +T+ Sbjct: 133 TKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDIEVTK 192 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 R+++ + + + VLDHI+IG ++VS E+G I Sbjct: 193 RLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225 >UniRef50_UPI0000E0FF1E DNA repair protein RadC n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0FF1E Length = 213 Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 79/204 (38%), Positives = 124/204 (60%) Query: 19 ISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFA 78 IS +D +LL + L+ ++ LA+ +L GSL+G+L + F + G+G K+ Sbjct: 9 ISQWSDSQLLGVILQQRHSSENSQALAETLLTELGSLHGVLNASQNAFCDIPGVGPQKYK 68 Query: 79 QLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHR 138 + + + EL +R + L S + ++ F SQL +E F V L++QH + ++ Sbjct: 69 RCQAVVELHKRTGAQHVERMMKLDSVDESKAFFISQLQYYPQERFAVALLNNQHEFLHYK 128 Query: 139 RLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFM 198 LFSGT+N V+PREI++ A+ NA+ +ILAHNHPSG EPS+AD IT+RI ++ + Sbjct: 129 ELFSGTINAASVYPREIVKYALDYNAANVILAHNHPSGTPEPSQADIAITQRIRQALDLI 188 Query: 199 DLRVLDHIVIGRGEYVSFAERGWI 222 D++VLDHIV+G G VS A+RG + Sbjct: 189 DVQVLDHIVVGAGNAVSLAQRGCL 212 >UniRef50_B3HA66 DNA repair protein RadC n=3 Tax=Enterobacteriaceae RepID=B3HA66_ECOLX Length = 157 Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 67/122 (54%), Positives = 97/122 (79%) Query: 101 LLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAI 160 LS + T+ +LQ L +ERE+F+V++LD+Q+R++ H LF GT+N EVHPREI++ A+ Sbjct: 36 FLSSDATKTWLQLHLARQEREMFVVLYLDNQNRLLEHETLFLGTINSTEVHPREIVKSAL 95 Query: 161 KINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 + NA+A+ILAHNHPSG AEPS+AD+LIT I+K+ +++RVLDH +IG G+ +SFAERG Sbjct: 96 RHNAAAVILAHNHPSGVAEPSRADRLITTNIVKTLDLVNVRVLDHFIIGAGDVLSFAERG 155 Query: 221 WI 222 W+ Sbjct: 156 WL 157 >UniRef50_B2URH1 DNA repair protein RadC n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2URH1_AKKM8 Length = 246 Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 79/203 (38%), Positives = 128/203 (63%), Gaps = 2/203 (0%) Query: 9 MPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSG 68 +PREK+L+ G +L++ ELLA+FLR G +GK+VL ++ +++++ GSL L E + + Sbjct: 14 LPREKLLRQGRHSLSNAELLAIFLRMGIKGKNVLDMSSDLIQSAGSLDALAHMEAAEIAN 73 Query: 69 V-HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 + GIG+AK A L EL R + + P+ +PE ++L + + +E+E +V+ Sbjct: 74 ICKGIGMAKAATLSAAFELGARALRETLSRQ-PIQTPEDVYDYLTTAMRWKEKETVLVLL 132 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 LD++ R+I + SGTLN HPR+I+R + NA ILAHNHPSG PS+ D L+ Sbjct: 133 LDTKCRLIKPVEISSGTLNESIAHPRDILRPTVIHNAYGFILAHNHPSGNPAPSRTDDLL 192 Query: 188 TERIIKSCQFMDLRVLDHIVIGR 210 TER+ + + + +R LDH++IG+ Sbjct: 193 TERVRECSKLLGVRFLDHVIIGK 215 >UniRef50_C2BCF6 DNA repair protein RadC n=2 Tax=Anaerococcus RepID=C2BCF6_9FIRM Length = 226 Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 82/214 (38%), Positives = 136/214 (63%), Gaps = 2/214 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PREK++K G ++L++ ELLA+ + TGT K+ + LA+E+L F S LL E E+ + + Sbjct: 14 PREKLIKLGHASLSEKELLAIIISTGTDKKNAIELAEEILATF-SEEALLEIEVEELTKI 72 Query: 70 HGIGVAKFAQLKGIAELARRYY-NVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 +GI AK +++ + +R + +++ + S E EF++ ++ ++RE F I L Sbjct: 73 NGIKEAKASKIVASLQFGKRIKEKILNKKKYQINSNEEAYEFIKDTISLKDREYFYTILL 132 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 ++++ VI+ + G L+ V+PRE+ + AIK +A ++ILAHNHPSG PSKAD LIT Sbjct: 133 NNKNEVISKELISIGDLSSSIVNPREVFKPAIKKSAKSMILAHNHPSGNPSPSKADLLIT 192 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 R+I + + +D+ VLDH++IG G YVS + +I Sbjct: 193 HRLIDAGEILDITVLDHLIIGHGTYVSLKKDNYI 226 >UniRef50_A3ER13 DNA repair protein (RadC) n=3 Tax=Leptospirillum RepID=A3ER13_9BACT Length = 237 Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 81/211 (38%), Positives = 124/211 (58%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PRE++ G +AL D ELLA+ LR G RG+ + LA+ +L +G L G+ + + S + Sbjct: 19 PRERLRDRGPAALHDAELLAILLRVGNRGESSVALAQRLLAKYGGLEGVAAAGFSALSSL 78 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+G+AK AQ+ EL RR + S + L ++L E++E F V+ LD Sbjct: 79 SGMGLAKAAQIMAGIELGRRVSGKARSFRPEIRSARDVYDILGARLRDEKKESFWVLLLD 138 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 +HR+ R+ G+L+ VHPRE + AI+ +A+A++ HNHPSG EPS D +TE Sbjct: 139 QRHRLQNAVRISEGSLSMTLVHPREAFQPAIRDSAAAVLFVHNHPSGDPEPSSDDWSLTE 198 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 R+ + + + +RVLDH+V+G +VS ERG Sbjct: 199 RLKECGELLGIRVLDHVVLGDHAWVSLEERG 229 >UniRef50_A7HJG0 DNA repair protein RadC n=3 Tax=Thermotogaceae RepID=A7HJG0_FERNB Length = 225 Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 88/220 (40%), Positives = 130/220 (59%), Gaps = 12/220 (5%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLLTSEYEQFSG 68 PREK+LK G AL EL+A+ LRTGT GKDVL +KE+ FG SLY + + ++ F Sbjct: 7 PREKLLKEGSEALETSELIAILLRTGTNGKDVLETSKELFNKFGGSLYKMSRATFDDFKS 66 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMT--REFLQS--QLTGEEREIFM 124 + G+G K L ELA+R ++EE+ +L P++T Q + +EI Sbjct: 67 IKGLGDVKIVTLMAALELAKRL----VKEETVILDPKLTSPENVFQYCIDMQSYPQEIVR 122 Query: 125 VIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKAD 184 VIFLD++ +VI + + GT+N HPR+I REAI +++ +ILAHNHPSG PSK D Sbjct: 123 VIFLDTKLKVIGSKDVSKGTINSSMAHPRDIFREAILRSSTGIILAHNHPSGDPTPSKDD 182 Query: 185 KLITERIIKSCQFMDLRVLDHIVIGRGEYV---SFAERGW 221 +T++I K+ + + + + DH++IG+ Y E GW Sbjct: 183 IELTKKIKKAGELLGINLHDHVIIGQTFYSLRQKCKEIGW 222 >UniRef50_D2MNQ5 Putative DNA repair protein RadC n=1 Tax=Bulleidia extructa W1219 RepID=D2MNQ5_9FIRM Length = 223 Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 82/220 (37%), Positives = 132/220 (60%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +KN + PREK L++G+S+L++ ELLAL LRTG R L +A E+L + GL Sbjct: 2 LKNIPVMEQPREKALQYGLSSLSNRELLALQLRTGYRHHSALEVADEILARADGISGLPR 61 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 ++ + GI K +L I E+ RR ++ + P + ++L+ ++ + Sbjct: 62 LSRQELIQIPGISQIKALELLAIFEIVRRSSAAKLPTLPRVQHPSVLFDWLKQEIGTSLQ 121 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+V+FL S RV++++ LF GT+N V PREI +EA+ +N+ +IL HNHPSG P Sbjct: 122 EKFLVVFLASDQRVLSYKILFVGTINASMVFPREIFKEALLLNSPNIILVHNHPSGNLSP 181 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 S+ D +T+RI ++ Q M ++VLDHI++ + +Y SF + G Sbjct: 182 SQEDISLTKRIKEAGQLMGVKVLDHIIVTQSDYFSFVQEG 221 >UniRef50_C8NZ93 DNA repair protein RadC n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZ93_ERYRH Length = 235 Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 84/214 (39%), Positives = 128/214 (59%), Gaps = 1/214 (0%) Query: 3 NNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSE 62 + SQ L PREK+L G + LTD EL+A+ LRTGTR K+V++LA E+L + G + L+ + Sbjct: 13 DRSQFL-PREKLLVLGPNKLTDEELVAILLRTGTRNKNVVSLASEVLTSIGGIQNLIKIQ 71 Query: 63 YEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREI 122 Y Q S + G+ AK L + EL RR E+ L S + +L ++ EE+E+ Sbjct: 72 YSQLSKIKGMKQAKCTTLLAVHELLRRIVMPFPGEKIKLSSCDRIVRWLNLEIGFEEQEL 131 Query: 123 FMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSK 182 F V+FL +Q+ +I + LF GT + VHPR++ REA++ NAS ++L HNHP G S+ Sbjct: 132 FRVLFLSTQNNLIRYLDLFKGTADKSLVHPRDVFREAVRCNASRIVLVHNHPGGSLSASE 191 Query: 183 ADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSF 216 AD +T +I+ + + V+DHI++ VS Sbjct: 192 ADVEVTRALIEVGMMIGIEVVDHIIVTSTNSVSL 225 >UniRef50_C5TNC6 DNA repair protein RadC n=3 Tax=Neisseria RepID=C5TNC6_NEIFL Length = 224 Score = 152 bits (384), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 77/213 (36%), Positives = 130/213 (61%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PREK+L G +AL+D ELLA+ LR GTRG + LA+ +L FGSL L++++ + + Sbjct: 12 PREKLLAHGAAALSDAELLAILLRVGTRGMSAVDLARYLLSEFGSLGKLMSADAKTLAAY 71 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+G+A + Q + E+ RR ++E+ L +P+ ++L+ L E+ E+ + + L+ Sbjct: 72 KGMGLASYTQFAVVKEIGRRILGEDLQEQIILSNPKSVADYLRLHLGHEKIEVSVALLLN 131 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 Q+++I R L GT+ V+ REI++ A+ A +LILAHNHP A PS++D TE Sbjct: 132 RQNQLIAVRELSRGTVAENTVYIREIVKLALDEYADSLILAHNHPGSSARPSESDVQFTE 191 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 R+ ++ +D+ +LDH ++ E S E+G++ Sbjct: 192 RLKQALSLVDITLLDHFIVTAKETCSLREQGYM 224 >UniRef50_C7RDS9 DNA repair protein RadC n=3 Tax=Anaerococcus RepID=C7RDS9_ANAPD Length = 228 Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 84/213 (39%), Positives = 132/213 (61%), Gaps = 4/213 (1%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PREK+++ G S+LTD ELLA+ L TGT+ K+V+ L+KE+LE F S LL E ++ + + Sbjct: 16 PREKLIREGFSSLTDYELLAIILSTGTKDKNVIELSKEILEVF-SYEELLEIEVKELTDI 74 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREES--PLLSPEMTREFLQSQLTGEEREIFMVIF 127 GI AK ++ +L +R N R+ ++ + S + + + +L+ ++E F I Sbjct: 75 KGIKQAKATRVVAGLQLGKRI-NERVLDKKIEKITSSKDVYDIMSPRLSNLKKEYFYAIL 133 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 LDS++ +I + G L V+PRE+ + AIK +A ++IL HNHPSG +PS D LI Sbjct: 134 LDSKNVIIAKEVISIGDLGSTVVNPREVFKPAIKKSAKSMILVHNHPSGNPKPSTEDFLI 193 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 T+R+ ++ +D++VLDHIVIG Y SF + G Sbjct: 194 TDRLAEAGDILDIKVLDHIVIGNSSYYSFKKEG 226 >UniRef50_A2RLC4 UPF0758 protein llmg_1515 n=4 Tax=Lactococcus lactis RepID=Y1515_LACLM Length = 227 Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 78/219 (35%), Positives = 124/219 (56%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K S + PRE++ G L+DVELLA+ LRTG + L LA E+L++FG+L Sbjct: 4 LKEKSYPMQPRERLELLGEEYLSDVELLAILLRTGRKKYSSLNLALELLQHFGTLDNFRK 63 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + + GIG K +L+ + EL +R + +LS + L ++ E+ Sbjct: 64 ASISELKEISGIGQTKAIELRAMIELGKRIQTTTRKRYGQVLSSKEYGMSLAFEMQNFEQ 123 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E +LD Q+++I + +F G NH PREI+ A+K + L++AHNHPSG +P Sbjct: 124 EHLTATYLDGQNQIIEKKTIFIGAFNHATASPREILYHAVKNLSVGLLVAHNHPSGNLQP 183 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAER 219 S+ADK+ T++I +C + + +DHI++G G Y SF ER Sbjct: 184 SQADKIFTKKIKNACDNIGINFIDHIIVGAGNYYSFRER 222 >UniRef50_C2KVW9 Possible DNA repair protein RadC n=1 Tax=Oribacterium sinus F0268 RepID=C2KVW9_9FIRM Length = 229 Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 84/218 (38%), Positives = 130/218 (59%), Gaps = 4/218 (1%) Query: 9 MPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLE---NFGSLYGLLTSEYEQ 65 +PREK ++ G+SALTD ELLA+ LRTGTR + VL LA+++L + L GL+ E Sbjct: 12 LPREKAIRLGVSALTDEELLAVILRTGTREESVLALAEKVLHLSPVYDGLVGLMQYSLED 71 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREE-SPLLSPEMTREFLQSQLTGEEREIFM 124 + G+G K +L+ I ELA+R +N ++REE SP ++ + +L E Sbjct: 72 LQAIKGVGETKALELQVIGELAKRIWNRKIREEVQSFRSPGSVLQYFKEELRHLSYEEVH 131 Query: 125 VIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKAD 184 V+FLD++ +++ L G+ N + REI EA++ + IL HNHPSG PS+ D Sbjct: 132 VLFLDTKAQLLKDFLLSKGSSNASILSGREIFMEALRAASVCFILVHNHPSGDPHPSRED 191 Query: 185 KLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + TE I K+ +++ + ++DHI+IG +Y SF E+G I Sbjct: 192 ERATEEIYKAGEYLGIHLMDHIIIGDNQYYSFKEQGKI 229 >UniRef50_Q3A8G4 UPF0758 protein Pcar_0065 n=2 Tax=Bacteria RepID=Y065_PELCD Length = 227 Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 80/213 (37%), Positives = 124/213 (58%), Gaps = 2/213 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTG--TRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 PREK+L G AL+D ELLAL LR+G G L + +++ F +L + T+ + Sbjct: 13 PREKLLHRGAEALSDAELLALILRSGDAASGHSALDQGRLLIQQFDTLRQMATATTSELQ 72 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 + GIG AK A+L+ + ELARR+ +R SP+ +L +RE F+ + Sbjct: 73 AIKGIGPAKAAELQAVFELARRFGRNPLRPGDRYTSPQAVFAHFHERLRDHKRERFIALL 132 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 LDS++R++ + G+L VHPR++ ++ +A+A++ HNHPSG PS+ D I Sbjct: 133 LDSKNRLLREVGISEGSLTASIVHPRDVFAPVVRESAAAVLFVHNHPSGDPSPSREDLDI 192 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 T+R+ + + M +RVLDHI+IG YVS A+RG Sbjct: 193 TQRLREVGELMGVRVLDHIIIGDEGYVSLADRG 225 >UniRef50_Q82ZX1 UPF0758 protein EF_2926 n=40 Tax=Firmicutes RepID=Y2926_ENTFA Length = 232 Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 126/213 (59%) Query: 9 MPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSG 68 +PRE++L G AL++ ELLA+ LRTG++ DV+T+A +L+ F L L + + Sbjct: 16 LPRERLLAIGEKALSNQELLAILLRTGSKEADVMTVAATLLKQFKQLSYLQQATLNELMA 75 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 + GIG K +L+ EL R Y + + S + + L ++ G ++E + I+L Sbjct: 76 IKGIGQVKAIELRAAIELGCRIYQSSQIKFGKVTSSQQVAQRLLQEMKGLQQEHLICIYL 135 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 ++++ +I + +F G+LN HPREI REA+K +++ ++LAHNHPSG PS D T Sbjct: 136 NTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDIQFT 195 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 +R+ + + M +++LDHI++G Y+S E + Sbjct: 196 KRMEECGEMMGIQLLDHIILGDSGYISLREENF 228 >UniRef50_Q38XC8 UPF0758 protein LCA_0852 n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Y852_LACSS Length = 224 Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 74/215 (34%), Positives = 125/215 (58%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 L PRE++ +G ++L+D +L + LR+GT+ V +A+ +L+ + L ++ Q Sbjct: 8 LQPREQVALYGAASLSDEQLATVILRSGTQHLPVEVVAQRLLQRYPDFQDLEQADLVQLR 67 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 + GIG K +L+ I EL+RR N R + S +M + + L GE +E + ++ Sbjct: 68 QIEGIGPVKAIELQAICELSRRIQNQRTLRFGVVASSQMVGQRMIESLAGETQEQLLAVY 127 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 LD ++++I ++L+ GTLN HPRE+ + A++ +A+ IL HNHPSG PS D Sbjct: 128 LDVKNQIIQIKQLYLGTLNSSVAHPREVFKWAVQYSAAKFILVHNHPSGQLAPSTQDINF 187 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 T+RI+ Q M + LDH++IG +Y+S E G++ Sbjct: 188 TKRIVNCGQLMGITCLDHLIIGSSQYLSLREEGYL 222 >UniRef50_B9E733 DNA repair protein RadC homolog n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E733_MACCJ Length = 223 Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 81/213 (38%), Positives = 128/213 (60%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PRE++L +G + LT+ ELL+L + +G R ++V T+A+ +LE+ G + L +++ + Sbjct: 11 PRERLLTYGAAQLTNQELLSLIIGSGVREENVYTVAQRLLEHIGHIGDLRYMTFQELITI 70 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 GIG K A + I ELA R + + SP L +L +E F+V+ L+ Sbjct: 71 KGIGQKKAAMILAIIELAIRMHTHTKETRIKVKSPACAANLLMERLRYMTQEHFIVLSLN 130 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 +++ V+ +F G+LN VHPRE+ +EA+K +A+A+I+ HNHPSG EPS D T+ Sbjct: 131 TKNIVMHESTIFIGSLNASIVHPREVFKEAVKRSAAAIIVVHNHPSGDPEPSYEDIEATK 190 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 R+IK + + VLDHI+IG G YVS E+G + Sbjct: 191 RLIKCGEIFGIDVLDHIIIGDGYYVSIKEKGIL 223 >UniRef50_B9XSW5 DNA repair protein RadC n=1 Tax=bacterium Ellin514 RepID=B9XSW5_9BACT Length = 244 Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 80/218 (36%), Positives = 126/218 (57%), Gaps = 6/218 (2%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PRE++++ G L + EL+A+ LRTG +G +T+A+++L FG+L L + V Sbjct: 25 PRERLVQHGADVLKNSELIAILLRTGLKGVSAITVAEQLLHRFGTLDTLSRATLADLCKV 84 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 GIG K LK LARR E + L +PE + L+ + E E F V+ L+ Sbjct: 85 KGIGRDKAIALKSAFTLARRMAAELKPEGTVLDNPEAIADLLREENRSYEVENFQVVLLN 144 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 ++ ++I + GTL+ + +HPRE+ + AI NASA++LAHNHPSG PS+AD +T Sbjct: 145 TRRKLIRVENITQGTLDTLLIHPREVFKSAISANASAIVLAHNHPSGDPTPSEADIKVTR 204 Query: 190 RIIKSCQFMDLRVLDHIVIGR------GEYVSFAERGW 221 +I++ Q + + +LDHI++GR +Y S E G+ Sbjct: 205 DLIRAGQLLKIEILDHIILGRRTNERPKDYASLRELGY 242 >UniRef50_B4RM65 UPF0758 protein NGK_1225 n=25 Tax=Neisseriaceae RepID=Y1225_NEIG2 Length = 225 Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 78/211 (36%), Positives = 127/211 (60%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PREK+L+ G +AL+D ELLA+ LR GTRG + LA+ +L+ FGSL L+++E + S Sbjct: 12 PREKLLERGAAALSDAELLAILLRVGTRGMSAVDLARYLLQEFGSLGRLMSAEVGKLSAY 71 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+G A F Q + E+ RR ++EE L P+ ++L+ L E+ E+ + + L+ Sbjct: 72 KGMGTASFTQFAVVREIGRRILEEELQEEITLSDPDTVADYLRFHLGQEKVEVSVALLLN 131 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 Q+++I R L GT+ ++ REI++ A+ A +LI+AHNHP G EPS+ D + T Sbjct: 132 RQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDIMFTR 191 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 R+ ++ +D+ +LDH ++ SF + G Sbjct: 192 RLAQAMSLVDVSLLDHFIVTSQTVRSFRQLG 222 >UniRef50_A5FRP1 DNA repair protein RadC n=6 Tax=cellular organisms RepID=A5FRP1_DEHSB Length = 228 Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 77/213 (36%), Positives = 124/213 (58%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PRE++ G AL+ VELLA+ L G G+ VL A+ ++ +FG G+ + E+ S + Sbjct: 16 PRERLQSLGAGALSSVELLAVILGRGVAGEPVLQSAQRLIAHFGGPSGIACASVEELSKL 75 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 GIG+AK QLK ELA+R ++ + + +PE + + + E++E F + LD Sbjct: 76 KGIGLAKACQLKAAFELAKRAGGIKGEYQPCIKTPEDVFQIIYPLVCDEKKEYFFCLMLD 135 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 + R+I + G+L VHPRE+ +EA+ +A+++ILAHNHPSG EPS D ++ Sbjct: 136 VKSRLIRVGHISVGSLEESVVHPREVFKEALSASAASVILAHNHPSGDTEPSHDDIGLSA 195 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 R+ ++ M + VLDHI+IG + S +G + Sbjct: 196 RLREAGGIMGIEVLDHIIIGGQSFTSLKRQGLL 228 >UniRef50_B4CZF8 DNA repair protein RadC n=2 Tax=Verrucomicrobia RepID=B4CZF8_9BACT Length = 231 Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 80/218 (36%), Positives = 124/218 (56%), Gaps = 6/218 (2%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PREK+ G AL+D EL+A+ LRTG G + + +A+++L F SL GL ++ S + Sbjct: 15 PREKLAAQGAGALSDSELIAILLRTGLPGANAVDVARKLLAEFKSLSGLARCSVKELSKI 74 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+G AK QL LA R + + L SPE+ + L ++ RE ++ LD Sbjct: 75 KGVGPAKAVQLVAAFGLASRLARETLARQR-LDSPELINDLLGPEMRALGRESLRLVLLD 133 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 +++ +I + G+LN HPRE+ R A+ +A A+IL HNHPSG PS AD +T Sbjct: 134 TKYLLIRVEEISHGSLNESIAHPREVFRPALIYSAYAVILVHNHPSGDPTPSSADHQLTR 193 Query: 190 RIIKSCQFMDLRVLDHIVIGRGE-----YVSFAERGWI 222 R+++ + + +R+LDH+++G G+ Y SF E G I Sbjct: 194 RLVQGAELLQIRLLDHVILGTGDNGRLPYFSFKEAGII 231 >UniRef50_Q0AWG3 UPF0758 protein Swol_1642 n=12 Tax=Firmicutes RepID=Y1642_SYNWW Length = 235 Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 84/226 (37%), Positives = 134/226 (59%), Gaps = 4/226 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLL 59 +K + + PREK++ G L + ELLA+ L +GTR + L LA+++L G SL L+ Sbjct: 10 IKEMPETMRPREKLIARGEDKLDEAELLAIVLGSGTREMNALELARQLLARHGGSLRFLM 69 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYY-NVRMRE--ESPLLSPEMTREFLQSQLT 116 ++ E+ + GIG+AK +K E+ RR N+++R +SP E RE ++ Sbjct: 70 SATLEELTAEKGIGMAKAVSIKAAIEMGRRVVGNIQLRRIIKSPEDVQEAVRELAMEEMR 129 Query: 117 GEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSG 176 +RE F V++LD + +IT + + G L+ VHPRE+ + A+K +A+++IL HNHPSG Sbjct: 130 HYDREHFRVLYLDRKGGLITMQDISIGGLHSSIVHPREVFKTAVKKSAASMILVHNHPSG 189 Query: 177 CAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS+ D IT R+I++ + M + +LDH++IG Y S RG I Sbjct: 190 DPTPSQEDIEITRRLIEAGKIMGIEILDHVIIGEINYCSLKARGLI 235 >UniRef50_Q1AVT6 UPF0758 protein Rxyl_1530 n=3 Tax=Bacteria RepID=Y1530_RUBXD Length = 227 Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 79/215 (36%), Positives = 124/215 (57%), Gaps = 1/215 (0%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 L PRE++L G SAL+D ELL + G+R K + LA +++ G L+ L + + Sbjct: 14 LRPRERLLAGGASALSDAELLGVLFGIGSREKTAVELAGDVISGAGGLHNLFGASVHELK 73 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 V GIG AK L ELARR R + SP L+ ++ +RE F+V+ Sbjct: 74 QVKGIGEAKACILLAALELARRLSVARNPGRPVISSPADVDGLLRGRIANLDREHFVVVL 133 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 L++++ VI + GTL+ VHPRE+ + AI+ +A++++LAHNHPSG EPS+ D+ + Sbjct: 134 LNTKNEVIEAPTISVGTLSSSLVHPREVFKPAIRASAASVVLAHNHPSGRVEPSREDREV 193 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 T R+ ++ + + VLDH+++G G Y S E G + Sbjct: 194 TGRVAEAGGIIGIEVLDHVIVGEG-YFSMKEHGML 227 >UniRef50_C9L5T8 DNA repair protein RadC n=4 Tax=Clostridiales RepID=C9L5T8_RUMHA Length = 231 Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 78/214 (36%), Positives = 123/214 (57%), Gaps = 3/214 (1%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLE---NFGSLYGLLTSEYEQF 66 P EK L+ G LTD ELLA+ LRTGT+G + +A+E+L+ + L GL Q Sbjct: 16 PYEKCLRMGAECLTDSELLAVLLRTGTKGSPSVEMAEEVLKLSKDKEGLLGLHQLSLAQL 75 Query: 67 SGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVI 126 V GIG K Q+K I EL++R ++ P ++ QL EE+E+ + + Sbjct: 76 QAVKGIGKVKAIQIKCIGELSKRIATATAKKGLSFRHPASIADYYMEQLRHEEQELLICM 135 Query: 127 FLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKL 186 LD+++ ++ +F GT+N +PREI A+ +A ++L HNHPSG PS+AD Sbjct: 136 MLDTKNHLLGDEMIFKGTVNSSLANPREIFLSAVSYHAVGILLVHNHPSGDCTPSQADVD 195 Query: 187 ITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 T+R+ ++ + + + +LDHI+IG +Y+SF E+G Sbjct: 196 FTQRVKEAGELLGIPLLDHIIIGDCKYLSFREQG 229 >UniRef50_C7GYN9 DNA repair protein RadC n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYN9_9FIRM Length = 230 Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 80/224 (35%), Positives = 123/224 (54%), Gaps = 2/224 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSL--YGL 58 MK Q PRE++++ G+ AL+ EL+A+ L TG + K V L+ +LE+ L L Sbjct: 1 MKKKKQFDAPRERLIEKGVEALSMAELIAIILSTGGKNKTVTELSHAILESKDRLGITSL 60 Query: 59 LTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGE 118 + E +GIG AK +L EL +R + + + + +PE +L E Sbjct: 61 CELDLEDLMNFNGIGEAKAMRLIAALELGKRQSEISVNIKRKIGNPEAIFHLFHEKLRYE 120 Query: 119 EREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCA 178 ++E F + L++ VI R+ G L HPRE+ + AIK AS++IL HNHPSGC Sbjct: 121 KKENFYAVMLNTAKHVIAKERISIGGLACAYAHPREVFKSAIKKAASSVILVHNHPSGCV 180 Query: 179 EPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS D LIT+R+I + + + + V+DHI+IG Y+S + G+I Sbjct: 181 TPSDEDVLITKRLINAGRIIGIEVIDHIIIGNENYLSMKKEGYI 224 >UniRef50_Q2LSS5 DNA repair protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSS5_SYNAS Length = 308 Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 122/212 (57%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 ++K K G+ AL D E + L L KD+ +L+K++LE FGSL G++ +E E+ + V Sbjct: 95 KKKFFKCGLQALHDYEAVELLLSYAIPRKDIKSLSKDLLERFGSLKGIMDAELEELTAVR 154 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 GI ++ + E++ Y + RE+ + +F ++ L G + E F V++LD+ Sbjct: 155 GISAHAAGLVRMVKEMSALYLQEKAREKPQISCTGELLDFCKTALGGLKDENFCVLYLDT 214 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 Q+R+I + G +N V+PR++I A+ +SALIL HNHPSG +PS AD +T Sbjct: 215 QNRIIAFETIQKGIVNQAVVYPRQVIERALSHKSSALILVHNHPSGFVKPSDADIRLTRT 274 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 I + + +D+ V DH++IG + SF E G + Sbjct: 275 ITDTAKLLDIMVHDHLIIGENRFFSFREEGIM 306 >UniRef50_Q3AF80 UPF0758 protein CHY_0341 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Y341_CARHZ Length = 226 Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 85/220 (38%), Positives = 135/220 (61%), Gaps = 1/220 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +KN + L PRE++L+ G +L ELLA+ L +GT ++ L LA +L FG L GL+ Sbjct: 5 IKNLPEELRPRERLLRHGPESLNPAELLAVLLGSGTPQENALELALRLLTTFGGLKGLIE 64 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 EQ GIG AK A+L ELARRYY + + L+P+ +L+ ++ +++ Sbjct: 65 VHPEQLKSFKGIGQAKAAKLLAALELARRYYELTGENKLNFLNPDDVYNYLRYKIGHKKQ 124 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E +V++L++++++ + G +NH V P +I REA+KI A A+I+AHNHPSG P Sbjct: 125 EQVVVLYLNTKNQLCGENIVAIGGVNHAGVSPGDIFREAVKIGAYAVIIAHNHPSGDPTP 184 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSF-AER 219 SK D T R+ K+ + + +++LDHI++G +Y+S AER Sbjct: 185 SKEDIDFTGRVKKASEILGIKLLDHIILGENKYISMKAER 224 >UniRef50_A9AE97 DNA repair protein n=8 Tax=Bacteria RepID=A9AE97_BURM1 Length = 169 Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 62/145 (42%), Positives = 101/145 (69%) Query: 78 AQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITH 137 A I E AR+ + +M+ SP +++L+++L G E E+F V+FLD++HR+I + Sbjct: 25 ASADQILEAARQVIDQKMQRGDEFTSPAAVKDYLRAKLAGFEHEVFAVLFLDTRHRLIDY 84 Query: 138 RRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQF 197 +F GT++ EVHPRE+++EA+++NA+A+I++HNHPSG EPS AD+ +T ++ ++ Sbjct: 85 AEMFRGTIDSAEVHPREVVKEALRLNAAAVIISHNHPSGNPEPSAADRAMTSQLRQALAL 144 Query: 198 MDLRVLDHIVIGRGEYVSFAERGWI 222 +D+R LDHI++ G SFAERG I Sbjct: 145 VDVRTLDHIIVAGGTTTSFAERGLI 169 >UniRef50_Q46A65 UPF0758 protein Mbar_A2303 n=2 Tax=Methanosarcinaceae RepID=Y2303_METBF Length = 229 Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 132/213 (61%), Gaps = 1/213 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PRE++++ G +L++ ELL + LRTG+ ++V++L+ + + S+ L + + V Sbjct: 17 PRERLIRNGPESLSNSELLGVILRTGSNKENVVSLSSRIFSEY-SIKQLSLANVSRLMKV 75 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 HG+G AK AQ+ + ELARR + + SP+ + ++ +++E F+ + LD Sbjct: 76 HGVGKAKAAQIAAVFELARRLETFVEEPKRKVCSPKDVYTLMYPKMREQKKEKFITLCLD 135 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 ++++++ + G+LN VHPRE+ + A+ +++++I+ HNHPSG PS+ D ++TE Sbjct: 136 TKNQILKEEVVSIGSLNASIVHPREVFKSALMESSASVIMIHNHPSGDPSPSREDIMVTE 195 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++++ + + + VLDHI+IG G YVS + G++ Sbjct: 196 KMVEGGKLLGIDVLDHIIIGEGRYVSLKDEGFV 228 >UniRef50_B1IPT7 DNA repair protein RadC n=3 Tax=Enterobacteriaceae RepID=B1IPT7_ECOLC Length = 159 Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 62/120 (51%), Positives = 90/120 (75%) Query: 103 SPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKI 162 S R++L+ QL ERE F +FLD+QHR+I H LF+GT+NH +VHPRE+++ +K Sbjct: 40 SSHAVRDWLRLQLASLEREEFTALFLDNQHRLIAHETLFTGTINHTQVHPREVVKAGLKH 99 Query: 163 NASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 N +A+I+AH+HPSG AEPSKAD+ +T RI ++ +D+R+LDH+V+G E SFA+RGW+ Sbjct: 100 NCAAVIVAHSHPSGEAEPSKADRQVTTRIQQALDLVDIRLLDHLVVGGMEITSFADRGWL 159 >UniRef50_O67541 UPF0758 protein aq_1610 n=2 Tax=Aquificaceae RepID=Y1610_AQUAE Length = 231 Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 78/220 (35%), Positives = 131/220 (59%), Gaps = 5/220 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K + L PREK+LK G L+D ELLA+ L +G++G DVL+L+KE+++ L Sbjct: 15 LKEIPEELRPREKLLKLGPENLSDEELLAVILGSGSKGADVLSLSKELIKM--GWEELEK 72 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 E+ V G+G+ K Q+K + EL++R+ + R + +P+ EFL+ + E R Sbjct: 73 KSVEELLKVRGLGLVKALQVKALVELSKRFKGGKSR--ISIRNPQEAFEFLKDKFD-ERR 129 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E + ++LD +R++ + G +N V P++I+ +A+K++A+ +I+AHNHP G P Sbjct: 130 ESLIALYLDLSNRLLDWEVVAIGNVNTVFSKPKDILFKAVKLSANGIIIAHNHPQGEPSP 189 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 S D TER+ K+C+ + +LDH+++ G Y SF E G Sbjct: 190 SNEDLNFTERLKKACELLGFELLDHLILSEGRYFSFREEG 229 >UniRef50_A9BIK5 DNA repair protein RadC n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BIK5_PETMO Length = 222 Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 78/211 (36%), Positives = 123/211 (58%), Gaps = 2/211 (0%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 L PREK+ K+G +LTD EL+A+ LR G R +V +++++L+ + +L L+ E+ S Sbjct: 5 LKPREKLEKYGPQSLTDQELIAIILRHGVRNYNVFDVSEQILKKYKTLSELVDISLEEIS 64 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREE-SPLLSPEMTREFLQSQLTGEEREIFMVI 126 G+G LK E+ +RY+ ++R++ + SPE + + E I Sbjct: 65 KEKGVGKVGAINLKAALEIGKRYHLQKLRQKYQKVTSPEEAYHVCEDMIYLS-TETVRAI 123 Query: 127 FLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKL 186 FLDS+ +IT + + +GT+N HPR+I REAI NA + IL HNHPSG PS D+ Sbjct: 124 FLDSKLHIITIKDISNGTVNMSIAHPRDIFREAIMYNAVSFILVHNHPSGDPTPSMHDRD 183 Query: 187 ITERIIKSCQFMDLRVLDHIVIGRGEYVSFA 217 IT++I+ S + + + + DHI+IG+ Y SF Sbjct: 184 ITKKIMDSGEILGINMNDHIIIGKDSYFSFT 214 >UniRef50_B2A699 DNA repair protein RadC n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A699_NATTJ Length = 241 Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 74/208 (35%), Positives = 118/208 (56%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PRE+ LK G A++D EL+A+ L TGT+ L LA +L N+ S++ LL + + + Sbjct: 29 PRERFLKLGPEAISDSELIAIILGTGTKQSSALDLANSILSNYVSIFNLLQATISELCEI 88 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 GIG AK +LK ELA R + SPE + +L E RE F+ + L+ Sbjct: 89 PGIGYAKSIKLKAAFELANRCMAREQLTMDKITSPEDIFRLMNFRLKTETREHFLAVMLN 148 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 ++ ++ + G+LN VHPRE+ AI+ +A +IL HNHPSG EPS+ D +T Sbjct: 149 TKSYLLKIDLISIGSLNATIVHPREVFNRAIRASACGVILVHNHPSGDPEPSQDDIKLTN 208 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFA 217 R++ + + + ++DH++IG ++ SF+ Sbjct: 209 RLVAAGDLLGIPIMDHVIIGHQKFYSFS 236 >UniRef50_A6DS55 DNA repair protein RadC n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DS55_9BACT Length = 235 Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 77/229 (33%), Positives = 135/229 (58%), Gaps = 7/229 (3%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENF-GSLYGLL 59 +K+ ++ PRE+ML+ G + L++ ELLAL + +GTR + L LA+E+L +F S++ L Sbjct: 5 IKDLAEFDRPRERMLQLGEAQLSESELLALIIGSGTREQSALGLAREILAHFDNSVFRLS 64 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 + E +HG+G AK L+ + LAR+ E+ + PE +L L G+ Sbjct: 65 RATLEDLETIHGVGPAKATSLRAVFALARKLVAEEAMEQFTIHRPESAAPYLIQLLAGKS 124 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 +E F ++ LD+++R++ ++ G L+ VHPRE+ REA++ + +ILAHNHPSG Sbjct: 125 KEEFHILLLDTKNRLMRSSQISIGLLDRSHVHPREVFREALRYGTAKIILAHNHPSGDPS 184 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRG------EYVSFAERGWI 222 PS D T+ +I++ + + ++V+DH++IG ++VS + G + Sbjct: 185 PSPQDIECTKNLIEAGEILGVKVVDHLIIGHKLPGDSRQFVSLRQLGLV 233 >UniRef50_C8WXL6 DNA repair protein RadC n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WXL6_ALIAD Length = 233 Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 76/213 (35%), Positives = 124/213 (58%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PRE++++ G SAL ELLA +++G ++V +A+ + + G L L E + V Sbjct: 17 PRERLMRLGPSALRVDELLACIMQSGNGKQNVYEIAQSLCRHLGDLDRLADLEVAELLSV 76 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 GIG AK Q+ EL RR E+ + + E +++ +L ++E F+ + LD Sbjct: 77 PGIGPAKAVQIAAAVELGRRVARKPPGEKRQIRTAEDAAKYVMDRLRYLKKEHFVTLLLD 136 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 ++HRV+ G+L+ VHPREI R AI+I+AS+++ HNHPSG PS D +T+ Sbjct: 137 TKHRVLAEDTSSVGSLDASIVHPREIFRRAIRISASSILCIHNHPSGDPSPSPEDIAVTK 196 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 R++++ + + + VLDHIVIG G +VS G++ Sbjct: 197 RLVEAGRVLGIEVLDHIVIGDGRFVSLRAEGYL 229 >UniRef50_Q9KR57 UPF0758 protein VC_1786 n=59 Tax=Proteobacteria RepID=Y1786_VIBCH Length = 158 Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 63/118 (53%), Positives = 91/118 (77%), Gaps = 1/118 (0%) Query: 105 EMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINA 164 E T E+L+ +L G E EIF V+FLD+QHR+I + LF GT++ V+PRE+++EA+ +NA Sbjct: 42 ENTTEYLRCKLAGYEHEIFAVLFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNA 101 Query: 165 SALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +A+I AHNHPSG EPS+AD+ IT+R+ + +D+RVLDH+V+G+ VSFAERGW+ Sbjct: 102 AAVIFAHNHPSGDPEPSQADRRITQRLKDALSLVDIRVLDHVVVGKSS-VSFAERGWL 158 >UniRef50_C8U0Q3 Predicted DNA repair protein n=21 Tax=Enterobacteriaceae RepID=C8U0Q3_ECO10 Length = 180 Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 59/120 (49%), Positives = 93/120 (77%) Query: 103 SPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKI 162 S R++L+ L +ERE+FMV++LD+QHR++ LF+G++NHV+VH RE+++ A++ Sbjct: 61 SSTAARDWLRLHLARQEREVFMVLYLDNQHRLLESETLFAGSVNHVQVHSREVVKSALRF 120 Query: 163 NASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 NA+A++LAHNHPSG EPS+ D+ IT R+ ++ + +D++ LDH+V+GR VSFAERGW+ Sbjct: 121 NAAAVVLAHNHPSGDPEPSQCDRNITGRLKEALELVDVKTLDHLVVGRDGIVSFAERGWL 180 >UniRef50_D1R5B1 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5B1_9CHLA Length = 238 Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 76/212 (35%), Positives = 118/212 (55%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PRE++L+ G L+ VEL+A+ L +G +G +L L++E++ FGSL L + E+ + Sbjct: 19 PRERLLQHGADVLSSVELIAVLLGSGMKGMPILQLSQEIMSRFGSLQNLADATIEELCQI 78 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+G AK QLK L +R ++ + + +P ++ L +E F+ I D Sbjct: 79 KGLGTAKAIQLKAALNLGKRLSRTQVSAKFQIRTPLHAYHLVKDDLEKAMQEHFLTILQD 138 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 + VI + GTL VHPRE+ AI+ A++LIL HNHPSG PSK D +T+ Sbjct: 139 VKGYVICSPTVALGTLTATVVHPREVFYPAIRHRAASLILVHNHPSGDPTPSKEDLDVTK 198 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 ++ + + + V DHI+IGR YVS E G+ Sbjct: 199 TLVAVGRLVGICVNDHIIIGRDRYVSLREEGF 230 >UniRef50_B9Y7M6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7M6_9FIRM Length = 228 Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 127/213 (59%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PREK L GI ++ E+LAL LR+G G L +A ++L+ + GL ++ + Sbjct: 15 PREKALHQGIEHCSNKEILALILRSGVPGASSLMIADQLLQRSQGVRGLSRLTLKELMQI 74 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 GI + ++ ELARR + RE + +P+ +L ++ G+++E F+ I+LD Sbjct: 75 KGISQVRGLEILACFELARRISEEQTREIDVVANPDALMAWLGREIGGKQQEHFLAIYLD 134 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 +++ ++ HR LF GTL+ VHPRE+ +EA+ +A +++ HNHPS PS AD++IT+ Sbjct: 135 AKNHILEHRLLFKGTLDASIVHPREVFKEALLASACRVLVVHNHPSQDLTPSLADRIITQ 194 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 R+ ++ + + + +LDH+++G +Y SF G + Sbjct: 195 RLKETGELIGIELLDHLIVGTTQYFSFRAHGLL 227 >UniRef50_A5KLJ1 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5KLJ1_9FIRM Length = 233 Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 79/215 (36%), Positives = 121/215 (56%), Gaps = 3/215 (1%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG---SLYGLLTSEYEQF 66 P EK KFG LTD ELLA+ +RTGT+G++ L L++++L G L G+ ++ Sbjct: 16 PYEKCEKFGAENLTDTELLAILIRTGTKGENSLELSRKLLYKNGFHNGLAGIHKWSLDEL 75 Query: 67 SGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVI 126 + GIG K QL ++EL++R + SP ++ + REI +I Sbjct: 76 IQIKGIGKVKAIQLVCLSELSKRLARTSTVGKLDFSSPRTIADYYMEDMRHRTREILKLI 135 Query: 127 FLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKL 186 FL+++ R+I + GT++ V PRE+ EA K NA +IL HNHP G PS+ D + Sbjct: 136 FLNTRCRLIGECNVSEGTIDSALVSPRELFIEAFKRNAYGIILLHNHPGGDPTPSREDVM 195 Query: 187 ITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 IT RI ++ + + +R+ DHIVIG +VS E+G+ Sbjct: 196 ITRRIYEAGELLGIRLFDHIVIGDNCFVSMKEKGF 230 >UniRef50_B4X5D3 DNA repair protein RadC n=4 Tax=Alcanivorax sp. DG881 RepID=B4X5D3_9GAMM Length = 164 Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 59/122 (48%), Positives = 88/122 (72%) Query: 101 LLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAI 160 L +P +FLQ L E+ E+F IFL+++H+V++ LFSGT++ V+PR ++++A+ Sbjct: 43 LTAPTDVAQFLQMALAQEKNEVFAAIFLNNKHKVLSFEPLFSGTIDGAAVYPRVVVQQAL 102 Query: 161 KINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 NA+A+I AHNHPSGC EPS+AD+ IT R+ + +D+RVLDH V+ R E+VS AERG Sbjct: 103 ACNAAAVIFAHNHPSGCCEPSQADRTITTRLKDALALIDVRVLDHFVVSRSEWVSLAERG 162 Query: 221 WI 222 W+ Sbjct: 163 WL 164 >UniRef50_Q64AS5 DNA repair proteins n=1 Tax=uncultured archaeon GZfos29E12 RepID=Q64AS5_9ARCH Length = 403 Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 78/224 (34%), Positives = 133/224 (59%), Gaps = 14/224 (6%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG--SLYGL 58 +K+ Q PREK+ ++G L + ELLAL LRTG + ++ + ++ ++ +G L L Sbjct: 183 IKDICQAERPREKLERYGAGYLNNDELLALILRTGHQKENAIEMSHRLINEYGLDKLSDL 242 Query: 59 LTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYN-VRMREESPLLSPEMTREFLQSQLTG 117 +E ++ + GIG AK Q+ + E +R+ V+ +E + PE + +L Sbjct: 243 ALNELQE---IKGIGFAKACQIIALFEFNKRHNKAVKTKEIVTIEKPEDVYNYFVDELKD 299 Query: 118 EEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGC 177 +++E F + LDS++++I + GTL++ VHPRE+ +EAIK +A+ +IL HNHPSG Sbjct: 300 KKKEHFYALLLDSKNKLIKKDLVSVGTLDNSLVHPREVFKEAIKNSAAGVILVHNHPSGD 359 Query: 178 AEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 EPS+ D IT++I K+ ++++VLDH++I AE+GW Sbjct: 360 PEPSENDVEITQKIAKAGNILNIKVLDHVII--------AEKGW 395 >UniRef50_C6DAT0 DNA repair protein RadC n=5 Tax=Enterobacteriaceae RepID=C6DAT0_PECCP Length = 157 Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 63/120 (52%), Positives = 92/120 (76%) Query: 103 SPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKI 162 + E T+ +L +L+ ERE+FMV++LD+QHR+I + G +N EVHPREI++ +++ Sbjct: 38 TSEDTKSWLMLELSNLEREVFMVLYLDNQHRLIEKEVIALGGINSTEVHPREILKASLRH 97 Query: 163 NASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 NA+A+ILAHNHPSG AEPS+AD+ IT+R+ S +D++VLDH+V+G E VSFAERGW+ Sbjct: 98 NAAAVILAHNHPSGWAEPSQADRNITDRLKDSLSQLDVKVLDHLVVGSTEVVSFAERGWL 157 >UniRef50_B5YL92 DNA repair protein RadC n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YL92_THEYD Length = 222 Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 80/220 (36%), Positives = 126/220 (57%), Gaps = 20/220 (9%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEML----ENFGSLYGLLTSEYEQ 65 PREKM K G AL+D+ELLA+ L +G +GKDV +A+++L E+F +L E Sbjct: 13 PREKMEKKGAKALSDLELLAVLLGSGIKGKDVFEVARDILKLTQEDFNNLNLDNLKNIE- 71 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYY---NVRMREESPLLSPEMTREFLQSQLTGEEREI 122 G+G+AK Q+ E ++R+ ++++ +L + +L +++E Sbjct: 72 -----GVGLAKACQIMAAIEFSKRFLLKEGIKIKNVDDVLK-------ITEELKDKKQEY 119 Query: 123 FMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSK 182 F+ + LD +I R +F GTLNH VHPREI +AI A+ +I HNHPSG +EPSK Sbjct: 120 FLSLTLDGASNLIQKRTVFIGTLNHSIVHPREIFADAISDRAAGIIFVHNHPSGDSEPSK 179 Query: 183 ADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 D IT+R+++ + + + V+DHI+I + Y SF G + Sbjct: 180 QDIEITKRLVEIGKMLGIEVIDHIIISKNGYYSFQAEGML 219 >UniRef50_C4FYP9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FYP9_ABIDE Length = 240 Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 78/214 (36%), Positives = 128/214 (59%), Gaps = 3/214 (1%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLLTSEYEQFSG 68 P EK K GI+ L+D ELLAL LRTGT+ + + L +++LE+ G SL GL ++ Sbjct: 15 PFEKYRKQGITMLSDAELLALVLRTGTKNINCMELCRKVLESGGGSLAGLYGKTEKELCN 74 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPL-LSPEMTREFLQSQLTGEEREIFMVIF 127 + G+G K ++ I ELARR R + PL + ++++ +++ +E + + + Sbjct: 75 IQGVGPVKAVEIICICELARRIARTRHSYDEPLDTAAKISKRYMEEMRHFKEEHVVL-LL 133 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 LD + R+I + GT+N + PRE+ +A+K A L+L HNHPSG PSKAD ++ Sbjct: 134 LDIKCRLIKELTISIGTINQSFLRPREVFIQALKYEAVNLVLIHNHPSGDPTPSKADIIV 193 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 T++I++ + + + ++DHI+IG YVSF E+G Sbjct: 194 TDKILEVSELVGIPLVDHIIIGDCCYVSFREKGL 227 >UniRef50_B1YJT0 DNA repair protein RadC n=2 Tax=Exiguobacterium RepID=B1YJT0_EXIS2 Length = 217 Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 73/213 (34%), Positives = 127/213 (59%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 P++ + G++ T VELLA +R+GTR + L +A+++LE + SL L + Sbjct: 5 PKDMIQLKGLAQATTVELLACLVRSGTRNRCPLEIAEDLLEIYPSLIELEAAGVGGLEKA 64 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+G AK Q+ EL RR + SP+ E L ++ ++E F+ ++L+ Sbjct: 65 PGVGKAKALQIMAGLELGRRLVTEPKWVRPVVRSPDDAAELLMEEMRLYQQEHFICLYLN 124 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 +++ VI+ + LF G LN VHPR+I REAI+ +A++ I HNHPSG PS+ D ++E Sbjct: 125 TKNEVISKKTLFIGGLNTSIVHPRDIFREAIRCSAASFIAVHNHPSGDPTPSREDIEVSE 184 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 R++++ + + + +DH+VIG G+++S +RG++ Sbjct: 185 RMVEAGRLIGISCIDHLVIGHGQFISMKQRGFM 217 >UniRef50_A4W1K3 UPF0758 protein SSU98_1084 n=76 Tax=Streptococcus RepID=Y1084_STRS2 Length = 246 Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 69/214 (32%), Positives = 128/214 (59%) Query: 9 MPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSG 68 +PRE++++ G L++ ELLA+F+RTGT+ + V L+ ++L SL L E+ Sbjct: 12 LPRERLVEVGAERLSNQELLAIFIRTGTKKEPVSILSNKLLNRLESLAALRELSIEELQS 71 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 + GIG K ++K + EL +R + +L E + ++ +++E + ++L Sbjct: 72 LTGIGRVKAIEIKAMIELGKRINQSELLLNERILGSEKLGRKMIHEIGHKKQEHLVALYL 131 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 ++Q+++I+ + +F G++N PREI+ A+K A+++I+ HNHPSG +PS+ D L T Sbjct: 132 NTQNQIISQKTIFIGSVNRSIAEPREILHYAVKCMATSIIIVHNHPSGSVQPSRNDLLFT 191 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 E + +SC+ + L +LDH+++G +Y SF E + Sbjct: 192 ENLKESCEKLGLVLLDHLIVGNKDYYSFREESDV 225 >UniRef50_D1VVJ8 DNA repair protein RadC-like protein n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVJ8_9FIRM Length = 236 Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 74/219 (33%), Positives = 127/219 (57%), Gaps = 6/219 (2%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEML-----ENFGSLY-GLLTSEY 63 P+EK+L G SALT+ ELLAL +RTGT+ + L +++L EN SL GL + Sbjct: 17 PQEKLLHLGPSALTNAELLALIIRTGTKELTSVELCEKILRELKRENNSSLLSGLRIASM 76 Query: 64 EQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIF 123 ++ + + G+G AK A + LA R + + ++ + SPE +++ + + E E+F Sbjct: 77 DKLTAIKGVGQAKAAMIMAALTLAERLNSSSIYDKKKITSPEDAAKYVMASMRDLETEVF 136 Query: 124 MVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKA 183 +I L+++ + R + G +N VHPRE+ R+AI A ++IL HNHP+G PS+ Sbjct: 137 RIIILNTKKEIKYIREISHGIINMTVVHPREVFRQAISDGAHSIILLHNHPTGDPSPSQE 196 Query: 184 DKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 D+ +T R+++ + + + + DHI+IG + SF + G + Sbjct: 197 DRNLTRRLVEVSKIVGIDICDHIIIGDNTFFSFLKEGIL 235 >UniRef50_A1B4F1 UPF0758 protein Pden_2304 n=44 Tax=Alphaproteobacteria RepID=Y2304_PARDP Length = 263 Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 76/212 (35%), Positives = 123/212 (58%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 RE+ ++ G +A+ D ELL L L +DV LA+ +L+ FG +L++ + + V Sbjct: 52 RERFMQGGAAAMPDYELLELVLFRAIPRQDVKPLARRLLDRFGDFNRVLSAPPARLAEVS 111 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+G A +LK + A+R R+ L S + ++ + + E E F V++LD Sbjct: 112 GLGPAVLQELKIVEAAAQRLARSRVMHRPVLTSWDALLDYCHTAMAHGEIEQFRVLYLDR 171 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++ +I GT++HV V+PREI+R A++++ASALIL HNHPSG PS+AD +T R Sbjct: 172 KNVLIADEEQARGTVDHVPVYPREIMRRALELSASALILVHNHPSGDPTPSQADIGMTNR 231 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 I+ + + M + V DH++IGR +SF G + Sbjct: 232 IVAAAEVMGIAVHDHLIIGRSRELSFRSEGLL 263 >UniRef50_A6Q5Q5 DNA repair protein RadC n=2 Tax=unclassified Epsilonproteobacteria RepID=A6Q5Q5_NITSB Length = 220 Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 128/213 (60%), Gaps = 6/213 (2%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PREK+L+ G AL D EL+A+ L +G +GKDV+ L+KE+++ F + + E+ + Sbjct: 14 PREKLLEKGAKALKDYELVAILLGSGVKGKDVIKLSKEIIKLFQQDFDAIN--IEKLLQI 71 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 H +G+AK AQ+ EL++RY ++ ++S E L+ + +++E F+ +LD Sbjct: 72 HELGIAKAAQIVSAVELSKRYL---FKQHKTVISANDVYEELK-EYFDKKQEYFIAFYLD 127 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 +R+ R + GTLN VHPRE+ AI+ +++I+AHNHPS PS+ D L+T+ Sbjct: 128 GANRICEKRVITIGTLNQSLVHPREVFAPAIESRCASIIVAHNHPSNNLTPSREDILVTQ 187 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++ +S + + + +LDHI+ + +VS E G + Sbjct: 188 KLKQSGKILGIELLDHIIFSKEGFVSLQEEGIL 220 >UniRef50_D1U9S4 DNA repair protein RadC n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9S4_9DELT Length = 227 Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 81/210 (38%), Positives = 114/210 (54%), Gaps = 1/210 (0%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 REK+L+ AL D E+L L L +D LAK M+E FGSL L + +Q + Sbjct: 17 REKLLRDS-RALADYEILELALAAIIPRRDTKPLAKLMIERFGSLKDALMARPDQLEAIS 75 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 GIG A A EL R R R +PL P +++ + E F F+DS Sbjct: 76 GIGPAAVAHWALTQELFARMGEARTRSGAPLSDPAEVARAAMARIGSKGVEEFWAAFMDS 135 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++RVI ++ GT++ V PREI+ A+++ A+ALILAHNHP G PS+ D +T R Sbjct: 136 KNRVIAWEQVSKGTVDATPVFPREIMVTALRLEAAALILAHNHPGGDPTPSREDLDLTRR 195 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 I + Q + +R+LDHI++ EY SF E G Sbjct: 196 IRDTAQGLGIRILDHIIVTDHEYYSFNEHG 225 >UniRef50_C4ZA49 DNA repair protein RadC n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZA49_EUBR3 Length = 229 Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 75/214 (35%), Positives = 116/214 (54%), Gaps = 1/214 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLE-NFGSLYGLLTSEYEQFSG 68 P EK L G S L+D +LLA+ ++TGTR K V+ +A+++L +L L YE+ Sbjct: 16 PYEKFLSLGASGLSDADLLAIIIKTGTRDKTVIDIAQDILSGKHSNLLNLYEMSYEELLS 75 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 + GIG K QLK IAEL+ R + + + +P+ ++ Q+ E+ + + Sbjct: 76 IPGIGQIKAIQLKAIAELSLRIAKTKKVQSIRMNNPQTIADYYMEQMRHLTNEVVICAYF 135 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 D + R + + + G+L+ V IIR A+ NAS L+L HNHPSG PS+ D +T Sbjct: 136 DVKSRFLGDKFISKGSLSSSVVDIGSIIRTALDKNASKLVLLHNHPSGDCTPSRNDIAVT 195 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +R+I+ + + DHI+IG EY SF E I Sbjct: 196 DRLIEGSGIFSIELCDHIIIGDNEYYSFYENKLI 229 >UniRef50_C7PSZ0 DNA repair protein RadC n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PSZ0_CHIPD Length = 237 Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 82/216 (37%), Positives = 119/216 (55%), Gaps = 5/216 (2%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEML---ENFGSLYGLLTSEYEQF 66 PREK++ G SAL+D ELLA+ L G + K L LA+E+L N S G LT EQ Sbjct: 23 PREKLISKGNSALSDAELLAILLNDGYKQKSALALAQEVLRAASNNLSEMGKLT--LEQL 80 Query: 67 SGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVI 126 + GIG AK ++ + ELARR M ++ + + + L E F V+ Sbjct: 81 KKIQGIGTAKATKIIAVMELARRRQAGCMLQKKTIRQGRDAALYFKPLLGDAALESFHVL 140 Query: 127 FLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKL 186 +L+ RV+ HR + G + V P+ I REA+++ A+ +IL HNHPSG PS AD Sbjct: 141 YLNHASRVLQHRCISIGGITGTIVDPKVIFREALELGATQVILCHNHPSGNLRPSTADIQ 200 Query: 187 ITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ITE++ + + +D+ VLDHI++ Y S E G+I Sbjct: 201 ITEKLKAAGRLLDISVLDHIIVSEAGYCSMVEEGFI 236 >UniRef50_C4XRP2 DNA repair protein RadC n=4 Tax=Desulfovibrionales RepID=C4XRP2_DESMR Length = 228 Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 74/202 (36%), Positives = 116/202 (57%) Query: 21 ALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQL 80 AL E+L L L +D LAKE+L FGSL G+LT+ +E+ GV G G L Sbjct: 27 ALAKYEVLELVLGYVNVRRDNKPLAKELLARFGSLRGVLTARFEELRGVPGFGAGAEEFL 86 Query: 81 KGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRL 140 E+ R++ MR+ + L SP++ E ++++ +E E F + +D+++R++ R+ Sbjct: 87 TLWREVWARFHEQPMRDRAVLGSPDVVAEMARARIGVKEHEEFWMALVDTKNRLVGWERV 146 Query: 141 FSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDL 200 GT++ V+PRE+I A++ NAS +IL HNHP +PS D T RI+ + + MD+ Sbjct: 147 SKGTVDQAAVYPREVIAMALRYNASGVILVHNHPGADPKPSAEDMAFTRRIVAAAREMDI 206 Query: 201 RVLDHIVIGRGEYVSFAERGWI 222 RVLDH+V+ + SF G I Sbjct: 207 RVLDHLVVTENRFFSFQAEGMI 228 >UniRef50_C7GE95 DNA repair protein RadC n=2 Tax=Roseburia RepID=C7GE95_9FIRM Length = 243 Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 75/214 (35%), Positives = 115/214 (53%), Gaps = 1/214 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLEN-FGSLYGLLTSEYEQFSG 68 P EK L +G L+D ELLA+ +R+GT G + +A+ +L + +L L +E+ Sbjct: 28 PYEKFLTYGPEYLSDAELLAVIIRSGTSGLKSVEVAQNLLNDGHRNLLNLYDIPFEKMQK 87 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 + GIG K QLK IAEL++R + + +P ++ L E +E +V Sbjct: 88 IRGIGPIKAIQLKCIAELSKRIAQTKSAPNVCMTNPRTIADYYMEHLRHENKEHLIVCMF 147 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 D++ + + L G+ N V PRE+ AI +A+ LIL HNHPSG EPS AD ++T Sbjct: 148 DNKCHMKGDKLLSVGSANETIVSPREVFETAINCHAAHLILVHNHPSGIPEPSHADDVVT 207 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +RI+ Q M + + DH++IG Y S+ E I Sbjct: 208 KRILNCGQLMGIPLSDHVIIGDHSYFSYRENNRI 241 >UniRef50_UPI000196B4AA hypothetical protein CATMIT_00107 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B4AA Length = 226 Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 76/213 (35%), Positives = 121/213 (56%), Gaps = 2/213 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PREK L GI +LTD ELLAL LRTG + + VL L+ +L + G T + + Sbjct: 11 PREKALLNGIESLTDEELLALLLRTGNKEQSVLDLSSTILREIHGMNGFHTITFAKLLSF 70 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 GI AK + E ++R N+ +P L+++++ +E F+++ LD Sbjct: 71 KGINKAKAIGIMAALEFSKRI-NIHTNINEVYDNPTKVFYHLETKMSHLSQEHFLIMILD 129 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 + +R+I + LF G++N V REI REA+ N ++I HNHPSG A PS D +T+ Sbjct: 130 NHNRLIAEKTLFIGSVNMSIVSAREIFREALAFNGVSIICVHNHPSGDAHPSSEDISMTQ 189 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSF-AERGW 221 +++ + M++ ++DHI+IGR +Y SF AE+ + Sbjct: 190 KLVDLGKMMNVDIVDHIIIGRNQYYSFKAEKVY 222 >UniRef50_C7TC16 DNA repair protein n=8 Tax=Lactobacillus RepID=C7TC16_LACRG Length = 222 Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 72/208 (34%), Positives = 117/208 (56%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PRE++L G ALTD ELL L +R G + V + E+L + +L GL + + + Sbjct: 8 PRERLLAHGPQALTDAELLQLIVRAGNQHYPVQEIVSEVLTTYPALRGLAEGDGDSLDHI 67 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+G AK A + EL RR + + + E + + S+ G +E +++FLD Sbjct: 68 RGLGAAKRASILAGVELGRRVMRRQSVRYGQIKNSEQLGKTMVSRFAGANQESMLILFLD 127 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 ++++IT + + GT++ PR + REA+K++A+ LI+ HNHPSG PS+AD+ T Sbjct: 128 VKNQIITEQIVAIGTVDSALADPRVVFREALKLSATNLIMVHNHPSGDPSPSQADRDTTT 187 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFA 217 R + + + +LDH++IGR Y SFA Sbjct: 188 RFQLAAALLGMHLLDHLIIGRQSYYSFA 215 >UniRef50_Q6MAB0 UPF0758 protein pc1765 n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Y1765_PARUW Length = 231 Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 69/213 (32%), Positives = 124/213 (58%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PRE++++ G +L+ +E+LA+ L +G++ VL +++ ++ FG L L+ + + V Sbjct: 17 PRERLIRHGADSLSLIEILAIILGSGSKVASVLEVSRALVTRFGGLEALMQATLTELLEV 76 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 GIG AK QLK L R +++ + + ++ +L E REIFM IF D Sbjct: 77 QGIGFAKAIQLKAALNLGFRATRQQIKSRYLIEHSSHAYQLVKDELENENREIFMAIFQD 136 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 ++ +IT+ + G+L+ VHPRE+ AI+ A++LI+ HNHPSG PS D +T+ Sbjct: 137 TKGYLITYEVISIGSLSQTLVHPREVFYSAIRHKAASLIVVHNHPSGDPMPSNQDLKLTQ 196 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +++ + + + + DH++IG+ YVSF ++ + Sbjct: 197 ILLEGSRLLGIPLRDHLIIGKNSYVSFKDQNLL 229 >UniRef50_A6TQH8 UPF0758 protein Amet_2289 n=54 Tax=cellular organisms RepID=Y2289_ALKMQ Length = 232 Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 76/214 (35%), Positives = 120/214 (56%), Gaps = 1/214 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLE-NFGSLYGLLTSEYEQFSG 68 PREK+L +G +L++ ELLA+ L TGT+ + LA +L + L L E E+ Sbjct: 19 PREKLLNYGPESLSNPELLAIILSTGTKEMSAIDLATHVLSYSEEGLRHLKNCEIEELQQ 78 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 + G+G+AK +Q+ EL +R + SP+ L ++ ++E F + L Sbjct: 79 IKGVGIAKASQILAAVELGKRISLTSRVNHYRIKSPDDVSNLLMEEMRYLKKEYFNIALL 138 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 +++H VI + G+LN VHPRE+ AIK ++SA+IL HNHPSG PS D IT Sbjct: 139 NTKHEVIAIENISIGSLNASIVHPREVFVVAIKRSSSAIILVHNHPSGDPSPSGEDIRIT 198 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +R++++ + + + VLDHI+IG Y S E+ + Sbjct: 199 KRLVEAGKLLGIEVLDHIIIGDNVYYSLKEKSMM 232 >UniRef50_Q5DY97 DNA repair protein RadC n=17 Tax=Proteobacteria RepID=Q5DY97_VIBF1 Length = 165 Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 61/130 (46%), Positives = 91/130 (70%) Query: 93 VRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHP 152 V++R S L SP++ E ++L +ERE+F ++ LD+QHR+I G+++ V+P Sbjct: 36 VKIRNTSALTSPDLAAELCVNRLVHQEREVFAILMLDNQHRLIKFVEHSVGSISSASVYP 95 Query: 153 REIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGE 212 RE+++ + NA+A+I AHNHPSG AEPS AD+ IT R+ + + +D++VLDH VIG GE Sbjct: 96 REVLKSVLHYNAAAVIFAHNHPSGVAEPSDADRRITARLSSALELIDVKVLDHFVIGVGE 155 Query: 213 YVSFAERGWI 222 VSFA+RGWI Sbjct: 156 TVSFAKRGWI 165 >UniRef50_C4Z083 DNA repair protein RadC n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z083_EUBE2 Length = 230 Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 76/215 (35%), Positives = 121/215 (56%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 L+P EK L+ G +L + ELLA +RTGT G + LA+++LE+ G+L GL + Sbjct: 15 LLPYEKCLQHGAMSLDNAELLAAIIRTGTNGLSSIQLAEKLLESAGNLKGLYDMSVSELM 74 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 + GIG AK Q+ I EL+RR + RE + E + + E+E +++ Sbjct: 75 QIKGIGKAKAVQICCILELSRRIAKQKARERLDFSNAETIAGYYMEDMRHLEKEHLVLVM 134 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 LD++ R+I + L GT V REI +EA+ A++++L HNHPSG PS+ D + Sbjct: 135 LDNRCRLIRDKVLSVGTSTGSMVSVREIFKEALDNRAASVVLLHNHPSGNPSPSREDMKV 194 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 T ++++ + + + +LDHIVIG Y SF + +I Sbjct: 195 TRSVMEAGKIIGIELLDHIVIGDNSYFSFKQMQYI 229 >UniRef50_B9L1S0 DNA repair protein radC homolog n=4 Tax=Bacteria RepID=B9L1S0_THERP Length = 261 Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 79/207 (38%), Positives = 120/207 (57%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PRE++ ++G LT+ ELLA+ L TGTRG+ VL LA+ +L FG L GL ++ Sbjct: 45 PRERIQQYGPEVLTNAELLAIILNTGTRGESVLDLAQRLLVEFGGLVGLARADLASLRRF 104 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 HG+G AK A+LK EL RR + E + +PE +++ E+E V+ LD Sbjct: 105 HGLGEAKAAKLKAALELGRRLALAQPEERPVIRTPEDVYAIAGAEMATLEQEQLRVVLLD 164 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 +++RV+ + G +N +V E+ REAI+ N AL+L HNHPSG PS+ D +TE Sbjct: 165 TRNRVVRTVTVAQGHVNGAQVRIAELFREAIRANTPALVLLHNHPSGDPTPSRQDIELTE 224 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSF 216 +++ + + V+DH+VIG G + S Sbjct: 225 SAVEAGTLLGIEVVDHLVIGHGRFCSL 251 >UniRef50_Q0F0W4 DNA repair protein RadC n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0W4_9PROT Length = 261 Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 112/212 (52%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 R++ + G D E+L L L DV LAK +L FG+L G+ + + VH Sbjct: 50 RQRFSQRGFDGFHDYEVLELLLTYAIARTDVKPLAKSLLTRFGTLAGVFDAPLAELKEVH 109 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 GIG L I ++ RY + L PE R +L+ + G E F +F D Sbjct: 110 GIGEGGALFLTLIRQVEVRYLASDLPGRQLLYRPERVRAYLRLLVQGRGMECFGAMFTDQ 169 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 QHR++T + LF GT++ V+PR +++ A++++A +IL HNHP G S D +T R Sbjct: 170 QHRLLTTQILFEGTVDRTAVYPRNLMKRALELDARGMILFHNHPGGTPHASNEDIELTRR 229 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + ++C ++L++LDH +I E +SF E GW Sbjct: 230 MAEACAPLELKILDHFLIADKEVLSFREHGWF 261 >UniRef50_C5NXB5 DNA repair protein RadC homolog n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXB5_9BACL Length = 257 Score = 135 bits (340), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 74/207 (35%), Positives = 120/207 (57%), Gaps = 1/207 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PREK K G AL+D E+LA+ LRTGT+ ++V+ L+ +L++ G + L + Sbjct: 15 PREKFKKLGALALSDKEILAILLRTGTKNQNVIELSDIILKDIGGITKLRDVTLTELMKH 74 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 GIG K + E ARR Y + + SP+ +L+S L +E+F+V+ +D Sbjct: 75 KGIGQEKAIHILANIEFARRIYATNVLD-VKCDSPQSIANYLKSSLENLTQEVFVVLDID 133 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 ++ ++I R +F G+L+ VHPRE+ + AIK +AS+++ HNHPSG A PS D T Sbjct: 134 TKGKIIEKREVFKGSLSMSVVHPREVFKLAIKNSASSIVCVHNHPSGDATPSIEDIKTTI 193 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSF 216 +++ + + + +LDHIV+ + YVS Sbjct: 194 NLMEVGEIVGIEMLDHIVVAKKGYVSI 220 >UniRef50_C4V569 DNA repair protein RadC n=2 Tax=Selenomonas RepID=C4V569_9FIRM Length = 225 Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 78/221 (35%), Positives = 123/221 (55%), Gaps = 13/221 (5%) Query: 9 MPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENF--GSLYGLLTSEYEQF 66 +PRE++L G + L+D ELLA+ LRTG G++VL LA+ + F L +L +F Sbjct: 11 LPRERLLAHGAAVLSDAELLAVLLRTGRAGENVLDLARGIAARFREEGLAAILRMPAAEF 70 Query: 67 SGVHGIGVAKFAQLKGIAELARRYYN-----VRMREESPLLSPEMTREFLQSQLTGEERE 121 + + GIG AK A + EL RR Y RM E + + + L ++ E RE Sbjct: 71 ARIPGIGSAKAATVLAALELGRRAYAGTRGMPRMNEAADVAA------LLSARCQAERRE 124 Query: 122 IFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPS 181 F V+ L +++ V+ + +GTL + VHPRE+ AI+ +A+ +I+AHNHPSG PS Sbjct: 125 HFFVLPLSAKNEVLMIADVSTGTLTNTLVHPREVFEPAIRCSAAHIIIAHNHPSGDPAPS 184 Query: 182 KADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 D +T + ++ + + V DH+++ R + SFAE G + Sbjct: 185 AEDHRLTRSLHEAGALLGIPVADHVIVARDGFFSFAEAGLL 225 >UniRef50_B5YDI9 DNA repair protein n=2 Tax=Dictyoglomus RepID=B5YDI9_DICT6 Length = 228 Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 74/214 (34%), Positives = 124/214 (57%), Gaps = 1/214 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PRE++L +G AL+DVELLA+ LRTG + V LA+ ++ +FGSL + + Sbjct: 15 PRERLLNYGEKALSDVELLAIILRTGDKKYSVYELAQNLIIDFGSLRRIAEVGIGELIKY 74 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLS-PEMTREFLQSQLTGEEREIFMVIFL 128 GIGV K Q+K EL RR ++ + +S P + + + E I++ Sbjct: 75 PGIGVTKAIQIKASIELGRRIFSEKKSYFGESISNPYDAFLIFKEDMFDLKEEHLFCIYM 134 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 D +++ ++ R + G LN V PR+I + A++ N++ +ILAHNHPSG PS+ D + T Sbjct: 135 DIKNKCLSKRLIAKGDLNIVYASPRDIFKYALQENSAKIILAHNHPSGDLTPSEDDVIFT 194 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +R+I++ + + + VLDH++I +Y+S E+ +I Sbjct: 195 KRLIEAGKILGIEVLDHLIIHNEDYLSLKEKNFI 228 >UniRef50_A6QHJ5 UPF0758 protein NWMN_1555 n=52 Tax=Staphylococcus RepID=Y1555_STAAE Length = 228 Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 75/217 (34%), Positives = 120/217 (55%), Gaps = 8/217 (3%) Query: 9 MPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSG 68 MPRE++L G +L++ ELLA+ + TG +G + ++ E+L++ +L L S Sbjct: 11 MPRERLLSHGAKSLSNTELLAILINTGRKGFSSIDISNELLKSASNLNELKKSSINDLIK 70 Query: 69 VHGIGVAKFAQLKGIAELA----RRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFM 124 V GIG+ K LK EL RR N R++ + P +++ + +E F+ Sbjct: 71 VKGIGLQKAITLKAAFELGERMGRRAENNRIK----ITQPSDVADYMIPTMKDLTQEHFV 126 Query: 125 VIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKAD 184 ++ L+S++ VI +F GTLN VHPREI A++ NA+A+I HNHPSG PS+ D Sbjct: 127 ILLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQED 186 Query: 185 KLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 + T R+ + + + +LDHI+IG + S E G+ Sbjct: 187 IITTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 223 >UniRef50_Q8DI83 UPF0758 protein tlr1707 n=31 Tax=Cyanobacteria RepID=Y1707_THEEB Length = 250 Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 81/219 (36%), Positives = 121/219 (55%), Gaps = 10/219 (4%) Query: 10 PREKMLKFGISALTDVELLALFLRTGT-RGK-DVLTLAKEMLENFGSLYGLLTSEY---- 63 PREK+L G L+ ELLA+ L TG GK + L + +L+ G G T Sbjct: 17 PREKLLSQGARYLSSAELLAILLGTGQGAGKLSAVGLGQFILKQLGERTGDSTDAVSALR 76 Query: 64 ----EQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 E+ + G+G AK + EL +R + R E++ + SP + L + L + Sbjct: 77 DITPEELMAIPGVGPAKATTILAAVELGKRVFQSRPGEQTIIDSPALAAAVLAADLMWQA 136 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 E F V+ LD +HR++ + GT HPREI REA++ NAS LI+AHNHPSG Sbjct: 137 TERFAVLLLDVRHRLLGSHVITVGTATETLAHPREIFREAVRRNASRLIIAHNHPSGNLS 196 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAE 218 PS+AD +T++I+++ Q M++ VLDH+++G G+Y S E Sbjct: 197 PSQADLDLTKQILQAGQLMEIPVLDHLILGNGDYQSLRE 235 >UniRef50_A1BHA1 UPF0758 protein Cpha266_1761 n=11 Tax=Chlorobiaceae RepID=Y1761_CHLPD Length = 223 Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 123/209 (58%), Gaps = 2/209 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PRE+ L+ G ++L+ ELLAL LR+GTR +++ ++ FG L L + + Sbjct: 12 PRERFLRTGPASLSPSELLALVLRSGTRNNNIIDTCNALIARFG-LERLADIPLSELQEI 70 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 GIG AK Q+ + EL +R + R + +LS E++ ++ +E V+ L+ Sbjct: 71 KGIGQAKAMQIIAVFELNKRIHYSRNLQRK-VLSARDVFEYMAGRVPDITKEHLFVLHLN 129 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 +++++I + ++ GTLN HPRE+ + AI+ +A A+IL HNHPSG EPS AD+ +TE Sbjct: 130 TKNQIIRNEQVTVGTLNASLAHPREVFKSAIRESAHAIILVHNHPSGDVEPSNADRQVTE 189 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAE 218 + ++ F+ + +LDH++IG + SF E Sbjct: 190 ILRQAGSFLQIDLLDHVIIGVDTWFSFRE 218 >UniRef50_C5SDF8 DNA repair protein RadC n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SDF8_CHRVI Length = 167 Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 96/134 (71%), Gaps = 3/134 (2%) Query: 89 RYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHV 148 R+Y V + L SP+ TR++L+ +L G E+F V+ LD++HRV+ ++ LF GT++ Sbjct: 37 RHYRV---AQEALTSPDATRDYLKLRLYGLTYEVFAVLLLDNRHRVLRYQELFRGTIDTA 93 Query: 149 EVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVI 208 VHPRE++R I+ A+A+I AHNHPSG ++PS+AD+ +T ++ + +++RVLDHI++ Sbjct: 94 YVHPREVVRLVIESGAAAVIFAHNHPSGSSDPSQADRTLTRKLQDALALIEVRVLDHIIV 153 Query: 209 GRGEYVSFAERGWI 222 G G +SFAE+GW+ Sbjct: 154 GEGRGMSFAEQGWL 167 >UniRef50_B5Y6A0 UPF0758 protein COPRO5265_1522 n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=Y1522_COPPD Length = 235 Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 122/212 (57%), Gaps = 4/212 (1%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PRE +L G L D +LLA+ LRTG + + LA+ +L FG GL + E+ + Sbjct: 19 PRELLLSKGPEHLPDAKLLAIILRTGNKEETAEDLARRLLNTFGGFTGLYRASVEELLQI 78 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREF----LQSQLTGEEREIFMV 125 G+G AK AQ+K E+ +R+ EE+ + +PE E+ S L E +E F + Sbjct: 79 KGMGKAKAAQVKAALEIGKRFLQNETVEEARITTPEDAIEYAARYFSSMLMNEGKEHFWI 138 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 + LD ++R I H + G+ V P+EI+++ +A ALIL HNHPSG PS+ D Sbjct: 139 LLLDRKNRPIKHVEISVGSSIQTTVDPKEILKQVSLTSAQALILIHNHPSGDPSPSREDV 198 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFA 217 +T+++ ++C+ + ++LDHI++G+ ++VS A Sbjct: 199 AVTKQLKQACELVGAQLLDHIIVGKNQHVSLA 230 >UniRef50_C0Q9Z9 RadC3 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9Z9_DESAH Length = 279 Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 119/212 (56%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 +++ L GIS D E++ L L T KD AK +L+ F +L G+ + E+ V+ Sbjct: 56 KQRFLANGISGFLDYEVIELLLTLNTPRKDCKPSAKALLDRFKTLQGVFEASVEELCRVN 115 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+G + +K I ++ RY R+R ++ L + FL + RE+F+ IFLD+ Sbjct: 116 GVGPSNVLGIKLIKAVSDRYLEQRIRSKTVLKNSHDLCAFLGHAIGHRPREVFVGIFLDA 175 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++RV+ LF G+L+ V+PRE+I +A++ A+ALI AHNHPSG PS D IT R Sbjct: 176 KNRVLASEILFEGSLSSSAVYPREVIAKALEHRAAALIFAHNHPSGETSPSPEDLAITRR 235 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + + + V +H++ G + SFA++G I Sbjct: 236 LFFALAHAGITVHEHLITGGERFYSFADQGII 267 >UniRef50_UPI0001BC32AB DNA repair protein RadC n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC32AB Length = 227 Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 69/219 (31%), Positives = 125/219 (57%), Gaps = 2/219 (0%) Query: 6 QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSL--YGLLTSEY 63 +L+P EK ++G ++LTDVELLA+ +R+GT+ K+ + +A+E+ + G++ GL Sbjct: 9 NVLLPYEKCERYGAASLTDVELLAVIIRSGTKDKNCIQVAEELFKLSGNMGILGLKHLTQ 68 Query: 64 EQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIF 123 + + GIG K + I EL+ R M + + + + ++ +L E E F Sbjct: 69 RDYCSIDGIGKVKSIMFQCIGELSSRISKATMAKRTVFNTSKDAADYCMEELRHLEYECF 128 Query: 124 MVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKA 183 MV+ L+++ +I + L GT+N+ + RE+ R A+ A +I+ HNHPSG PS+ Sbjct: 129 MVLLLNTKCELINEKILSMGTVNYTCITSREVYRYALSKGAVYIIVVHNHPSGDPTPSRE 188 Query: 184 DKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 D L T+++ ++ + + + ++DHI+IG Y+S E+ I Sbjct: 189 DSLCTKKLKEAGELVGIPLIDHIIIGDNRYISLKEQDMI 227 >UniRef50_Q2S8K4 DNA repair protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S8K4_HAHCH Length = 207 Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 67/168 (39%), Positives = 104/168 (61%), Gaps = 4/168 (2%) Query: 59 LTSEYEQFSGVHGIGVAKFAQL---KGIAELARRYYNVRMREESPLLSPEMTREFLQSQL 115 + + +Q +H G +F Q I +A+ + R P+ T+ +L QL Sbjct: 38 MNEDVQQHYSIHEDGSYQFNQAIHPDKIISIAKHILDGRFFRGKAFCDPDATKYYLVLQL 97 Query: 116 TGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPS 175 E+E+F +FLD+Q+R+I+ +LF GT++ V+PREI++ A+ +NA+A+ILAHNHPS Sbjct: 98 AEHEQEVFACMFLDNQNRLISFEKLFYGTIDQASVYPREIVKRALMLNAAAVILAHNHPS 157 Query: 176 GCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGR-GEYVSFAERGWI 222 G +EPS AD +T+ + S +D+RVLDHIV+G G VSF ERG++ Sbjct: 158 GMSEPSVADIAMTKTVKSSLALIDVRVLDHIVVGSDGSSVSFIERGYM 205 >UniRef50_C8VVH2 DNA repair protein RadC n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VVH2_DESAS Length = 227 Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 73/211 (34%), Positives = 117/211 (55%), Gaps = 6/211 (2%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 RE+ L +G S L D EL+ L L A ++ + GL+ EQ + V Sbjct: 22 RERGLNYGTSVLNDAELVMTLLGIN------LEKAMNLINIINGIRGLMDVSVEQLAEVK 75 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+G +K LK E+ +R + E + +P+ ++ ++ +RE F + L++ Sbjct: 76 GVGNSKALALKAAVEIGQRIAKTKAMECPSVKTPDDAVNYVMEEMRYMDREHFKALLLNT 135 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++RVI+ + GTLN VHPRE+ + AIK +A+A+IL HNHPSG PS+ D +TER Sbjct: 136 KNRVISLEAISVGTLNSSNVHPRELFKVAIKRSAAAIILIHNHPSGDPTPSREDIDVTER 195 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 + ++ + + + VLDHIVIG G++VS +G Sbjct: 196 LGEAGKIVGIDVLDHIVIGDGKFVSLKAKGL 226 >UniRef50_Q9KUK8 UPF0758 protein VC_0510 n=11 Tax=Gammaproteobacteria RepID=Y510_VIBCH Length = 157 Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 62/137 (45%), Positives = 98/137 (71%), Gaps = 6/137 (4%) Query: 86 LARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTL 145 LA RY +R ++ L +P+ T+E+++ +L ERE+F ++ LD+Q+R+I + LF GT+ Sbjct: 27 LANRY----VRGDA-LTNPDATKEYVRCKLGSYEREVFALLLLDNQNRLIEFKELFQGTV 81 Query: 146 NHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDH 205 + V+PRE+++ +++NA+A+I AHNHPSG + PS+AD+ ITER+ + +D+RVLDH Sbjct: 82 DAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADRRITERLKDTLALVDVRVLDH 141 Query: 206 IVIGRGEYVSFAERGWI 222 IV G SFAERGW+ Sbjct: 142 IVTG-DTCTSFAERGWL 157 >UniRef50_A0Z2T6 DNA repair protein RadC n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z2T6_9GAMM Length = 223 Score = 132 bits (332), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 75/200 (37%), Positives = 115/200 (57%), Gaps = 7/200 (3%) Query: 23 TDVELL--ALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQL 80 +D +LL AL L GT +A M ++ GSL+ + S + G+G + QL Sbjct: 24 SDADLLSAALGLPDGTAA-----VANYMSQHRGSLFESIASLLNCDIPLTGVGRQRRYQL 78 Query: 81 KGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRL 140 LA R + E SPL P ++LQ + RE+F +FLD+Q +++ R + Sbjct: 79 SCALLLATRLAEEELFERSPLKDPGSCYKYLQHHYLLQSREVFTCLFLDTQRQLLACRDM 138 Query: 141 FSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDL 200 F GTLN V+PREI+ A+K+ ASA+I+AHNHPSGC PS AD +T+R+ ++ +D+ Sbjct: 139 FFGTLNTAPVYPREIVAMALKMGASAIIVAHNHPSGCLAPSVADIQLTDRLRRALGLIDI 198 Query: 201 RVLDHIVIGRGEYVSFAERG 220 +LDH+++ +G Y+S A G Sbjct: 199 DLLDHLIVAQGRYLSMASEG 218 >UniRef50_A5EYF9 Response regulator receiver domain protein-DNA repair protein RadC n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EYF9_DICNV Length = 401 Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 76/226 (33%), Positives = 128/226 (56%), Gaps = 5/226 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 + ++ L MPRE++L+ G SAL+D ELLA+ LRTG GK VL A+E++ + G L GLLT Sbjct: 176 ITSDPSLDMPRERILRLGASALSDAELLAILLRTGVIGKPVLAFAQELIASRGGLVGLLT 235 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMR-EESPLLSPEMTREFLQSQLTGEE 119 S E + GIG AK A++ + EL +R+ ++ E S + R FL G Sbjct: 236 SRKEHLLPIKGIGQAKTAEILAVTELCKRFIAADLQLPEWQFSSADDVRNFLLMHYKGLG 295 Query: 120 REIFMVIFLDSQHRVITHRRL---FSGTLNHVEVHPREIIREAIKINASALILAHNHPSG 176 E ++ L+ +++ + + R+ F ++ V V R++++ + +A+A++L HNHP+ Sbjct: 296 FEEVAILLLNQKNQYLAYERIGQAFGSEVSQVNVSCRKLVKSVLDSDAAAVVLVHNHPAQ 355 Query: 177 CAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG-W 221 E S++D T+ I + + +R+LDH V+ + +S E G W Sbjct: 356 STELSESDLQTTKFIENFLKPLGVRLLDHFVVAGNQVISLRETGDW 401 >UniRef50_P52140 UPF0758 protein yfjY n=148 Tax=Enterobacteriaceae RepID=YFJY_ECOLI Length = 160 Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 55/120 (45%), Positives = 91/120 (75%) Query: 103 SPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKI 162 S + R++L+ ++ G ERE FM+++L+ Q+++I H LF+G+++ EVHPRE+++ A+ Sbjct: 41 STQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYF 100 Query: 163 NASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 NA+A+ILAHNHPSG PS+ADK IT+R++++ Q +D+RV DH+++G + SFAE G + Sbjct: 101 NAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 >UniRef50_C5V0A3 DNA repair protein RadC n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0A3_9PROT Length = 205 Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 57/120 (47%), Positives = 87/120 (72%) Query: 103 SPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKI 162 +P +++L+ L G ++E+F+V+FLD+QHR+I LF GTL V+PRE+++ A+ Sbjct: 86 NPVEVKKYLKLLLGGRQQEVFVVLFLDTQHRLIAAEELFHGTLTQTSVYPREVVKRALMH 145 Query: 163 NASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 NA+A++LAHNHPSG AEPS+AD+L+T + ++ +D+R LDH +IG +SFAERG I Sbjct: 146 NAAAVLLAHNHPSGLAEPSQADQLLTNALKQALALVDVRALDHFIIGDESALSFAERGLI 205 >UniRef50_B1H050 DNA repair protein RadC n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H050_UNCTG Length = 229 Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 118/212 (55%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 R+K + G S L D E+L L L KDV LAKEM+ FGSL + ++ +Q G+ Sbjct: 18 RKKFIPGGFSNLADYEILELTLTYVLPRKDVKALAKEMINKFGSLKQVFDADTDQLKGIK 77 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 GI L + + Y ++ ++E+ L SP+ +++L S L+GE E F I L+S Sbjct: 78 GISDYSAEFLLFLKKFISLYLSLDIKEKDRLSSPKNVKDYLISTLSGENIEKFYAILLNS 137 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 +RV + SGT+N + PR+I A+K A+++++AHNHP G +PS+ D T Sbjct: 138 GNRVTDCLEIESGTVNKSLLIPRKIAEIALKCRAASVVIAHNHPGGTLKPSQNDINATVA 197 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + K+ + +++ +LDHI+I Y SF E I Sbjct: 198 VKKALESIEISLLDHIIISNNNYFSFKEYSLI 229 >UniRef50_UPI00016B261F DNA repair protein RadC n=2 Tax=candidate division TM7 RepID=UPI00016B261F Length = 214 Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 75/208 (36%), Positives = 125/208 (60%), Gaps = 7/208 (3%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PREK+ ++G + L+D+ELL + +G + DV +A+E+L+ G ++ Y+ V Sbjct: 12 PREKLARYGTARLSDLELLMAIIGSGNKQADVGKIAREVLKIVRQKGGDIS--YDDLRYV 69 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLL-SPEMTREFLQSQLTGEEREIFMVIFL 128 G+G AK + ELARRY + + P++ SPE E L S + +++E F+ + L Sbjct: 70 VGLGEAKIPVIVASLELARRYL---LDSDQPIIDSPEKAVELL-SDIRDKKQEYFVCLTL 125 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 D +R+I R + GTL VHPRE+ +AI A+++I+AHNHPSG E S+ADK +T Sbjct: 126 DGANRLIAKRVVTIGTLTASLVHPREVFADAIADRAASIIVAHNHPSGSLEASQADKDVT 185 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSF 216 R+ ++ + + + + DHI+I + ++VS Sbjct: 186 SRLAEAGRLLGITLNDHIIITKTDFVSI 213 >UniRef50_D0MFA0 DNA repair protein RadC n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MFA0_RHOM4 Length = 245 Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 74/215 (34%), Positives = 115/215 (53%), Gaps = 4/215 (1%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGK----DVLTLAKEMLENFGSLYGLLTSEYEQ 65 PREK+++ G SAL+D EL+AL +GTR K + L + ++ +GSLY L + ++ Sbjct: 28 PREKLMRRGPSALSDAELIALIFGSGTRTKQGSISAVQLGQALIRAYGSLYALAQRDLKE 87 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMV 125 + V G+G AK QL E+ RR R + +P L +RE+F + Sbjct: 88 LTRVAGVGPAKAVQLVAAFEIGRRVEAQRPGRRIQVRTPADVAACYGPLLRDLKREVFKI 147 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 + L++ + +I + G L V PR + + AI NA+ +I HNHPSG EPS D Sbjct: 148 VLLNTANYIIADYTISEGGLAASIVEPRAVFQRAILDNAAGIICLHNHPSGNPEPSAEDI 207 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 IT +++++ + + + V DHI+I Y S AERG Sbjct: 208 RITRQLVEAGRLLGIPVHDHIIIAGTTYTSLAERG 242 >UniRef50_Q6AQC9 Related to DNA repair protein RadC n=4 Tax=Deltaproteobacteria RepID=Q6AQC9_DESPS Length = 249 Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 117/210 (55%), Gaps = 1/210 (0%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 R + + G+ L+D E++ L L GT D A+ +LE + S +L + V Sbjct: 22 RARYFERGLDGLSDAEIIELLLSFGTPRADCKLQARALLEKYTSFARVLEASPVALQEVK 81 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+G + I +A RY +R+ +S L S E+L ++ G ++E+F V+FLDS Sbjct: 82 GVGPKNSFAISFIHAVAARYLQLRLEGKSYLHSSTEVVEYLSYRMRGLKKEVFCVVFLDS 141 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 H +I + G+L VHPRE++ +A++ +A+ALI++HNHPSG PS D +T Sbjct: 142 SHGIICSEIIAEGSLTVNTVHPRELLVKALEHHAAALIISHNHPSGALLPSPQDIQLTRL 201 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 + C M +++LDHI+IG G Y SFA+ G Sbjct: 202 LYFLCSSMQIQLLDHIIIGDGAY-SFADHG 230 >UniRef50_B8FHA4 DNA repair protein RadC n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FHA4_DESAA Length = 265 Score = 130 bits (326), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 123/216 (56%), Gaps = 4/216 (1%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 RE+ L+ G+ D E++ L L T KD AK +++FGSL +L ++ + V Sbjct: 35 RERFLQNGLDGFLDYEVVELLLTLATPRKDCKQQAKAAVDHFGSLKAVLAADKDDLQKVK 94 Query: 71 GIGVAKFAQLKGIAELARRYYN---VRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 G+G A + + +A+++ V + + S E L Q ++ E F +++ Sbjct: 95 GLGPANILGILLMRAVAKKHLESEAVLASLQEAVSSSEELYNLLNFQFENKKNECFFIVY 154 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 LD Q+R++ F G+LN V+ RE+I +A+K ASA++LAHNHPSG +PSK D + Sbjct: 155 LDVQNRILNMETPFEGSLNASHVYTRELIDKALKTGASAVLLAHNHPSGNTKPSKNDIQL 214 Query: 188 TERIIKSCQFMDLRVLDHIVIGR-GEYVSFAERGWI 222 T + + + +++ +L+H++IG+ GEY SFA+ G++ Sbjct: 215 TYTLFTAFRSVEIHLLEHLIIGKQGEYYSFADHGYL 250 >UniRef50_C6LCB9 DNA repair protein RadC n=3 Tax=Clostridiales RepID=C6LCB9_9FIRM Length = 231 Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 73/216 (33%), Positives = 117/216 (54%), Gaps = 3/216 (1%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEML---ENFGSLYGLLTSEYEQF 66 P EK LK G L+D ELLA+ LRTG +G + LA+E+L + L GL Sbjct: 15 PYEKCLKCGAGVLSDAELLAVILRTGAKGMTSVELAREILSFPKPQPGLSGLYHLSASAL 74 Query: 67 SGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVI 126 + G+G K Q++ I EL+RR E + S + ++ ++E ++ Sbjct: 75 CDIKGVGKVKAVQIQCITELSRRIAKSVASEGNTFTSAQAIADYYMEDFRHLQQERVFLL 134 Query: 127 FLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKL 186 D++ +++ + + GT+N V PREI EA+ A +IL HNHPSG +PS D+L Sbjct: 135 SFDTKGELLSEKTISVGTVNQSCVSPREIFLEALSCRAVYVILLHNHPSGNPQPSPEDRL 194 Query: 187 ITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +T R+ +S + +++ ++DHI++G Y SF E G+I Sbjct: 195 LTMRVHESGKLLEIPLMDHIILGDRRYFSFREEGFI 230 >UniRef50_C4LDH2 DNA repair protein RadC n=2 Tax=Aeromonadaceae RepID=C4LDH2_TOLAT Length = 165 Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 64/149 (42%), Positives = 93/149 (62%) Query: 74 VAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHR 133 VA K I +ARR R+ + + P +LQ+ + E E+F +FLD+QHR Sbjct: 17 VASPVTEKDILIMARRLAKNRLAKGCSIERPSSAFIYLQALMGNYENEVFGSLFLDNQHR 76 Query: 134 VITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIK 193 +I LF GTLN +HPRE+++ A+ +NA+A+I HNHPSG EPS+ADK IT ++ + Sbjct: 77 IICFEELFRGTLNVTNIHPREVVKRALAVNAAAVIFVHNHPSGEPEPSEADKKITVQLRE 136 Query: 194 SCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + +D+RVLDHIV+G +S AERG + Sbjct: 137 TLNLIDVRVLDHIVVGAKACISMAERGLV 165 >UniRef50_C7M9C6 DNA repair protein RadC n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M9C6_CAPOD Length = 225 Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 78/218 (35%), Positives = 119/218 (54%), Gaps = 3/218 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLL 59 +KN + PREKM+ G +AL++ ELLA+ L +G+ + + L++ +L + SL L Sbjct: 3 IKNWADTDKPREKMISQGKTALSNAELLAILLGSGSADESAVELSRRILASVNNSLTTLG 62 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGE- 118 +Q GIG AK + E+ RR E P + L L GE Sbjct: 63 KQSLQQLQAFKGIGQAKAITILAATEMGRRRA-AETPEPQPKIEVAHNVFVLMQPLIGEL 121 Query: 119 EREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCA 178 E F V++L+S +RVI RLFSG + H V R + + A++ A ALIL HNHPSG Sbjct: 122 PHEEFWVLYLNSTNRVIHKARLFSGGITHTTVDVRLLFKTALEQGAIALILVHNHPSGST 181 Query: 179 EPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSF 216 PSK D +T+R+ + + +D+++LDH+++ EY+SF Sbjct: 182 TPSKEDIELTQRVKTAGEMLDIKLLDHVIVTEKEYLSF 219 >UniRef50_A5URD0 UPF0758 protein RoseRS_0767 n=7 Tax=Bacteria RepID=Y767_ROSS1 Length = 233 Score = 129 bits (323), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 79/211 (37%), Positives = 128/211 (60%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PRE++ G +AL D ELLA+ LR G G + + LA+++L FG GL + +E+ + Sbjct: 17 PRERLRSSGAAALADAELLAILLRVGIEGMNAIQLAQQLLVEFGGWNGLQRAGFEELAQR 76 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+G AK AQLK E+ RR E + SP + +Q +++ ++E I LD Sbjct: 77 RGMGEAKTAQLKAALEIGRRLLLAGGDERFLIRSPTDAAQLMQIEMSHLDQEQLRAICLD 136 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 +++RV + ++ G+L+ V EI +E I++N++++I+ HNHPSG PS D ++T Sbjct: 137 TKNRVQKIQTVYIGSLHTSMVRIGEIFKEPIRLNSASIIVVHNHPSGDPTPSPEDVVVTR 196 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 +II++ + +D+ VLDH+VIG G +VS ERG Sbjct: 197 QIIEAGRLLDIDVLDHLVIGAGRFVSMRERG 227 >UniRef50_A4SUN7 DNA repair protein n=2 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SUN7_AERS4 Length = 296 Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 67/140 (47%), Positives = 90/140 (64%) Query: 81 KGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRL 140 K I LA R L SPEM E+L+++ E E F +I LD+QHRVI L Sbjct: 22 KRIIALAHSIIARRFTRLDSLNSPEMVVEYLKTRFATLEHETFAMILLDNQHRVINAVDL 81 Query: 141 FSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDL 200 GT++ V+PRE+++ A+K NA+A+ILAHNHPSG AEPS+AD+ ITER+ + +D+ Sbjct: 82 SHGTIDSAAVYPREVVKTALKHNAAAVILAHNHPSGVAEPSRADRQITERLQAALDLVDI 141 Query: 201 RVLDHIVIGRGEYVSFAERG 220 RVLDHIV+ +SFA RG Sbjct: 142 RVLDHIVVAGENSMSFAVRG 161 >UniRef50_C0BM81 DNA repair protein RadC n=2 Tax=Bacteroidetes RepID=C0BM81_9BACT Length = 231 Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 73/213 (34%), Positives = 119/213 (55%), Gaps = 5/213 (2%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEML---ENFGSLYGLLTSEYEQF 66 PREK L+ G LTD ELLA+ L G+ G+ L+LAK +L +N L L E+ Sbjct: 18 PREKYLRLGGQKLTDAELLAIVLGNGSVGQSALSLAKTLLIACDN--DLQKLFELSIEKL 75 Query: 67 SGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVI 126 G+G K ++K + R +V L S L+ L G E F V+ Sbjct: 76 MDFKGVGKVKAIKIKASLDFGYRLLHVNATVPLSLSSSGAAFSILKPVLIGLTYEEFWVL 135 Query: 127 FLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKL 186 +LD+ + +I L G V R ++++AI+ A+A+I+AHNHP+G +PS +DK Sbjct: 136 YLDNSNVLIERSLLGKGGFTATVVDIRLVLQQAIRWGATAMIVAHNHPTGNLKPSHSDKA 195 Query: 187 ITERIIKSCQFMDLRVLDHIVIGRGEYVSFAER 219 +T+++ ++ + +D+++LDHI++G+ EY SFA++ Sbjct: 196 LTQKLKEAAKVLDIKLLDHIIVGKNEYFSFADQ 228 >UniRef50_Q7VMM9 Conserved possible DNA repair protein n=1 Tax=Haemophilus ducreyi RepID=Q7VMM9_HAEDU Length = 157 Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 60/140 (42%), Positives = 90/140 (64%), Gaps = 1/140 (0%) Query: 79 QLKGIAELARRYYNVRMREESPLLSPEM-TREFLQSQLTGEEREIFMVIFLDSQHRVITH 137 Q K + E R +R +P E E+ Q QL EERE+F V+F D+Q+R+I Sbjct: 13 QAKALYENVLRETGIRSYASNPSFGDEKEASEYCQMQLGFEEREVFGVLFWDTQNRLIRF 72 Query: 138 RRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQF 197 +LF GT+N +HPREI+++A+++N+SA+IL HNHPSG PS++DK T +I ++CQ Sbjct: 73 EKLFFGTINQASIHPREIVKKALELNSSAVILTHNHPSGQVTPSQSDKQTTAKIKQACQL 132 Query: 198 MDLRVLDHIVIGRGEYVSFA 217 +D+ VLDHI++ + SF Sbjct: 133 IDVNVLDHIIVSATDTYSFC 152 >UniRef50_D1N9M0 DNA repair protein RadC n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9M0_9BACT Length = 227 Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 117/209 (55%), Gaps = 1/209 (0%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 RE+ L+ G+ L D E + L L DV LAK++LE++GSL LL + + H Sbjct: 17 RERFLRAGLEGLQDYEAIELVLTFAIPRHDVKPLAKQLLEHYGSLEKLLDATPAELLDQH 76 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+G A L +L +Y + R+ L + FL+ +L G ++E FMV+FL++ Sbjct: 77 GLGEAAVTLLALHKQLCTKYLEQKARDVDVLDNTTKIVNFLRMKLGGGKKETFMVLFLNA 136 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 Q+ ++ + GT++ V+ RE++ +AI A+A+ILAHNHP+G EPS AD +T Sbjct: 137 QNHLLCF-DVIPGTVDRATVYAREVLEKAINTKATAVILAHNHPTGICEPSPADIKLTNT 195 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAER 219 I + Q + + + DHI++ Y SFA R Sbjct: 196 IRQVLQPVGILLHDHIIVAPSCYFSFASR 224 >UniRef50_Q2FT43 UPF0758 protein Mhun_2739 n=5 Tax=Archaea RepID=Y2739_METHJ Length = 225 Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 75/218 (34%), Positives = 119/218 (54%), Gaps = 12/218 (5%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSE----YEQ 65 PREK+ K G SAL D EL+A L GT+ D+LT++ ++ + LL + Y+ Sbjct: 15 PREKIEKKGASALKDSELIAAILGKGTKNNDILTISSQVAD-------LLKKDNLPSYDT 67 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQ-SQLTGEEREIFM 124 ++GIG K A L ELA RY +E + P+ + + + L+G+ +E F+ Sbjct: 68 LLRINGIGPTKAAVLMACFELANRYGTPAEKERIRITEPDHILKISEVTDLSGKSQEHFL 127 Query: 125 VIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKAD 184 V L+ VI R + G LNH VHPRE+ +AI A+A+I HNHPSG EPS D Sbjct: 128 VTTLNGASEVICTRTITMGLLNHSLVHPREVFADAITDRAAAIICIHNHPSGNPEPSSED 187 Query: 185 KLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +T ++ ++ + + + +LDH++ +G+ S G++ Sbjct: 188 ITVTRQLSEAGKILGISLLDHLIYTKGKVTSLRSLGYL 225 >UniRef50_B9MPC4 DNA repair protein RadC n=2 Tax=Clostridia RepID=B9MPC4_ANATD Length = 232 Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 66/212 (31%), Positives = 115/212 (54%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 + + ++ G+ D ++L L L KD +A ++ FGS+ + + ++ V Sbjct: 16 KRRFIEQGLDGFEDHQVLELLLFFSIPRKDTNEIAHRLISTFGSISNVFEAHPKELQKVK 75 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+G + I++++RRY + R+ L + E E+++S G + E+F VI LD+ Sbjct: 76 GVGENSAILISLISQISRRYLADKNRKTFQLRNVEAAAEYIKSLFVGRKNEVFYVICLDT 135 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 Q VI LF GT+ V+PR+++ I+ NAS++ILAHNHP G PS D T++ Sbjct: 136 QLNVIYSVPLFEGTVKEAVVYPRKVVECVIRYNASSVILAHNHPGGSVRPSMDDIKTTQK 195 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 I+ + + + V DH ++ + EY SFA+ G + Sbjct: 196 IVNALSTIGVAVNDHFIVAKDEYYSFAQNGML 227 >UniRef50_B0RXB0 DNA repair protein radC homolog n=3 Tax=Xanthomonas campestris pv. campestris str. B100 RepID=B0RXB0_XANCB Length = 159 Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 59/141 (41%), Positives = 93/141 (65%) Query: 81 KGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRL 140 +GI A R++ + + SP+ +L ++ EIF V+FLD+QH ++ L Sbjct: 18 EGILLAAATILEQRLQRQGRIHSPDQAGSYLVARCAHLSHEIFGVVFLDNQHHILAAEHL 77 Query: 141 FSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDL 200 FSGT++ E+HPR + + A+++NA+A+IL HNHPSG EPS+AD+ +T+R+ ++ +D+ Sbjct: 78 FSGTIDGCEIHPRVVAKRALELNAAAVILFHNHPSGNPEPSEADRKVTQRLQEALGLLDI 137 Query: 201 RVLDHIVIGRGEYVSFAERGW 221 RVLDH+VIG + VS A RGW Sbjct: 138 RVLDHLVIGGQKSVSLAARGW 158 >UniRef50_A6SWN0 DNA repair protein RadC n=14 Tax=Proteobacteria RepID=A6SWN0_JANMA Length = 190 Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 57/120 (47%), Positives = 86/120 (71%) Query: 101 LLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAI 160 L SP+ +++L+ QL E+RE+F V+F+D+QHRV+ + LF GT++ V+PR I++ A+ Sbjct: 68 LTSPKDVKDYLRLQLLNEKREVFAVVFMDTQHRVLAYEPLFFGTIHQTSVYPRAIVQRAM 127 Query: 161 KINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 +NA+++ILAHNHPSG PS+ADK +T R+ + +D+RVLDH +IG SFAE G Sbjct: 128 SLNAASMILAHNHPSGSTHPSEADKQLTNRLKSLLESIDVRVLDHFIIGEEGTFSFAEHG 187 >UniRef50_Q3BQ28 RadC family DNA repair protein n=5 Tax=Xanthomonas RepID=Q3BQ28_XANC5 Length = 187 Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 59/141 (41%), Positives = 93/141 (65%) Query: 81 KGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRL 140 +GI A R++ + + SP+ ++L S+ E+F V+FLD +H+++ L Sbjct: 46 EGILLAAATILEQRLQRQGKIHSPDQAGDYLISRCAHLPHEVFGVVFLDIKHQILATEHL 105 Query: 141 FSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDL 200 F GT++ EVHPR + + A+ +NA+A+IL HNHPSG EPS+AD+ +TER+ K+ +D+ Sbjct: 106 FFGTIDGCEVHPRVVAKRALDLNAAAVILFHNHPSGNPEPSEADRKVTERLQKALSLLDI 165 Query: 201 RVLDHIVIGRGEYVSFAERGW 221 RVLDH+VIG +++S A RGW Sbjct: 166 RVLDHLVIGGRQHISLAARGW 186 >UniRef50_B0T9F0 DNA repair protein RadC n=1 Tax=Caulobacter sp. K31 RepID=B0T9F0_CAUSK Length = 223 Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 71/208 (34%), Positives = 123/208 (59%), Gaps = 5/208 (2%) Query: 16 KFGISALTDVELLALFL-RTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGV 74 G S L+DVE+L L L R+G R + +LA +++ FG +L ++ Q +G Sbjct: 20 SLGPSVLSDVEILELHLARSGHR--EAGSLAHDLIARFGGFCAVLAADQSQLH--LAVGE 75 Query: 75 AKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRV 134 LK + E ARR + + L S ++L++ + G RE F V+FLD ++++ Sbjct: 76 LAAMDLKLLREAARRVTRADLAQRQLLTSFSQVADYLRALMAGLPREEFWVLFLDRRNQL 135 Query: 135 ITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKS 194 ++ RL G+++H V+PRE++R A+++N SA+ILAHNHPSG +PS+ D +T+ +I++ Sbjct: 136 LSAERLGVGSVDHAPVYPREVMRRALELNCSAMILAHNHPSGDPQPSQPDIEMTKTLIEA 195 Query: 195 CQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + + +++ DH+++ G VSF G I Sbjct: 196 GKALQIQIHDHMIVAGGAVVSFRANGLI 223 >UniRef50_Q5E054 DNA repair protein RadC n=3 Tax=Gammaproteobacteria RepID=Q5E054_VIBF1 Length = 157 Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 58/120 (48%), Positives = 88/120 (73%), Gaps = 1/120 (0%) Query: 103 SPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKI 162 +P T+ +L+ +L ERE+F V+ LD+QHR+I + LF GT++ V+PRE+++ +++ Sbjct: 39 NPTATQNYLRYKLGHYEREVFAVLLLDNQHRLIEFKELFQGTVDAASVYPREVVKAVLEV 98 Query: 163 NASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 NA+A+I AHNHPSG + PS+ADK IT R+ ++ +D++VLDHIV+G VSFAERG I Sbjct: 99 NAAAVIFAHNHPSGESTPSQADKRITTRLKEALALIDVQVLDHIVVGET-CVSFAERGLI 157 >UniRef50_C9LLN8 DNA repair protein RadC n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLN8_9FIRM Length = 227 Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 70/217 (32%), Positives = 121/217 (55%), Gaps = 5/217 (2%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENF---GSLYGLLTSEYEQF 66 PRE+ K +A + V+L+A+ LRTG G V+ +A+E++E + G ++ Sbjct: 12 PRERFAKAPDTA-SMVDLVAILLRTGRHGCSVMDMAQEVVEQIRLSTDVNGFDNLDWRDL 70 Query: 67 SGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLS-PEMTREFLQSQLTGEEREIFMV 125 V G+G K + EL RR +++ S PE + +L E++E F+V Sbjct: 71 ISVKGVGQDKAITVCAAVELGRRLAQFHNKKQLENFSFPEAVASYFMEKLRHEDQEHFIV 130 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 FL++++R++ ++ + G+L+ V +E +R A++ A +IL HNHPSG EPS AD Sbjct: 131 CFLNTKNRLLGYKEICVGSLDAAPVDIKEAMRWALRFKAHGMILVHNHPSGYPEPSDADI 190 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +T + ++ F D+R+LDH++IG GE+ S + G + Sbjct: 191 NLTRQFRRATSFFDIRLLDHVIIGDGEFASLNKNGLV 227 >UniRef50_A6GHT1 DNA repair protein RadC n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHT1_9DELT Length = 260 Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 83/213 (38%), Positives = 117/213 (54%), Gaps = 4/213 (1%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PRE++L FG +L++ ELLAL L + A+ +L+ G L GL + + V Sbjct: 36 PRERLLLFGPKSLSETELLALLLGG----GRAVQRAQAVLDAVGGLNGLSRACAHELREV 91 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 GIG A L EL RR + + PL P FL+S L ERE FM+I LD Sbjct: 92 IGIGDAGATALAAAVELHRRLDRLDLPMRRPLRHPREAERFLRSLLGDAEREHFMIIGLD 151 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 ++ RV+ R + G+L VEVHPRE+ R ++ A +L HNHPSG A PS+AD +T Sbjct: 152 ARQRVLLVRTIAVGSLTRVEVHPREVFRPLVRAGAHTCLLVHNHPSGDARPSEADIELTA 211 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 R+ +F+ + VLDH+V+ +VS AE G + Sbjct: 212 RMTDIGRFLGIPVLDHVVVSANGFVSLAELGLV 244 >UniRef50_Q3JDF2 DNA repair protein RadC n=4 Tax=Gammaproteobacteria RepID=Q3JDF2_NITOC Length = 171 Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 57/122 (46%), Positives = 86/122 (70%) Query: 101 LLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAI 160 L SP TR+FL+ L + E+F ++LD++HRVI LF GT++ V+PR ++++A+ Sbjct: 50 LPSPNHTRDFLRMLLAERKAEVFGCLYLDNRHRVIETVELFQGTIDGASVYPRVVVQQAL 109 Query: 161 KINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 +NA+A++ HNHPSG AEPS AD+ IT R+ ++ +D+RVLDH V+ GE +SFAERG Sbjct: 110 SVNAAAVMFFHNHPSGVAEPSNADEAITRRLKEALALVDIRVLDHFVVTAGESISFAERG 169 Query: 221 WI 222 + Sbjct: 170 LL 171 >UniRef50_A9NF52 DNA repair protein n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NF52_ACHLI Length = 217 Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 118/209 (56%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 + PREK+++ G+ AL D EL+A+ LRTG +DVL LAK++L + +L E Sbjct: 1 MKPREKLIQHGVRALEDYELIAILLRTGNTKEDVLLLAKKVLSQLDNFEDMLHITVEDLL 60 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 ++GI AK + EL RR + + + L+ ++ +E +V+ Sbjct: 61 TIYGISDAKATTIIAAVELGRRLSDRKKPVRKMITESSEVYHLLKEDMSYLRKEHLIVLC 120 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 LD + ++ + ++ GT + ++V +++ + A++I A +I+ HNHPSG + PS+AD + Sbjct: 121 LDIKGNLLKNETIYMGTTSSIQVSVKDLFKSAVRIGAFGIIVVHNHPSGDSTPSQADDKL 180 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSF 216 T+ I + + + + ++DHI+IGR E+ S+ Sbjct: 181 TKLIKNAGEVLSIELIDHIIIGRNEFFSY 209 >UniRef50_B0S3Y4 UPF0758 protein FMG_0357 n=2 Tax=Finegoldia magna RepID=Y357_FINM2 Length = 223 Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 72/217 (33%), Positives = 123/217 (56%), Gaps = 3/217 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLL 59 +K ++ L PREKM GIS+++D EL+ + L+TG + + V L+K +++ + Y L Sbjct: 3 VKEMNESLRPREKMKINGISSMSDEELMQIILKTGIKEEGVEILSKRVIDYINENDYKDL 62 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 E+ + GIG+AK + E+ RR + + L P+ E +++ + Sbjct: 63 C--VEELMKIKGIGMAKATSILAGIEIGRRLSLRKAMDSFSLNDPDSVAEIFCNEIGSCD 120 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 E F + LD+++R+I+ + GT+N VHPRE+ + AIK A+++IL HNHPSG Sbjct: 121 VENFYALLLDTKNRIISKELISKGTINQSIVHPREVFKSAIKKGANSIILVHNHPSGSLI 180 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSF 216 PS AD +T+R+ K + ++VLDHI++ + +S Sbjct: 181 PSNADIEVTKRLDKVGDLVGIQVLDHIIVSSNDSLSM 217 >UniRef50_Q0AJV4 DNA repair protein RadC n=18 Tax=Proteobacteria RepID=Q0AJV4_NITEC Length = 167 Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 58/130 (44%), Positives = 89/130 (68%), Gaps = 1/130 (0%) Query: 94 RMREESPLLS-PEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHP 152 R+ + P L P+ R++L+ +L E E+F+ +FL+SQH+V+ LF GT++ V+P Sbjct: 37 RVFKAGPTLDGPKAVRDYLRLKLMAEPNEVFVAVFLNSQHQVLACECLFKGTVSEASVYP 96 Query: 153 REIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGE 212 R +++ A+++NASALI +H HPSG AEPS AD+ IT R+ +D+RV+DH +IG+GE Sbjct: 97 RVVVQRALELNASALIFSHQHPSGVAEPSMADRAITNRLKFILSMIDIRVVDHFIIGKGE 156 Query: 213 YVSFAERGWI 222 SFAE G + Sbjct: 157 PYSFAESGLL 166 >UniRef50_Q0ACW7 DNA repair protein RadC n=2 Tax=Proteobacteria RepID=Q0ACW7_NITEC Length = 173 Score = 125 bits (315), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 55/124 (44%), Positives = 86/124 (69%) Query: 99 SPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIRE 158 + + PE+ ++ +++L G E E+F +IFL+SQ+R+I +R +F GTL V+PRE+++ Sbjct: 50 TAMTKPEIAADYFKNKLNGFEHEVFSIIFLNSQYRLIAYREMFQGTLTCASVYPREVVKA 109 Query: 159 AIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAE 218 AI NA+A+ILAH HPS EPS+ADK IT+R+ ++ +D+ VLDHI++G S AE Sbjct: 110 AISYNAAAVILAHCHPSKETEPSQADKAITKRLKEALDLIDVCVLDHIIVGGNTTKSMAE 169 Query: 219 RGWI 222 G + Sbjct: 170 MGLV 173 >UniRef50_UPI0001C34E02 DNA repair protein RadC n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34E02 Length = 243 Score = 125 bits (315), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 76/216 (35%), Positives = 116/216 (53%), Gaps = 3/216 (1%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEML--ENFGSLYGLLTSEYEQFS 67 P E+ + G ALTD ELL++ +RTG RG+ L+LA+ +L + GLL + + Sbjct: 28 PYERCERLGPEALTDAELLSIIIRTGARGEHSLSLAQRILALNEPQGILGLLHLTLPELT 87 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREE-SPLLSPEMTREFLQSQLTGEEREIFMVI 126 V GIG K QL I EL+RR + ++E PE F + E+E ++ Sbjct: 88 AVKGIGRVKGLQLLCIGELSRRIWKTLAQKEIKSFDGPESIAAFYMEDMRHMEQEELHLM 147 Query: 127 FLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKL 186 ++++ +I LF GT+N REI EA++ +A L L HNHPSG PS D Sbjct: 148 MFNTKNMLIRESCLFRGTVNASVASAREIFIEALRYHAVRLALVHNHPSGDPSPSGEDIR 207 Query: 187 ITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +T ++ ++ + + + +LDH++IG Y SF ERG I Sbjct: 208 LTRQVAQAGELLGVTLLDHVIIGDNSYFSFKERGII 243 >UniRef50_A7GTD5 DNA repair protein RadC n=3 Tax=Bacillaceae RepID=A7GTD5_BACCN Length = 185 Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 62/167 (37%), Positives = 108/167 (64%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PRE+++ G S+L++ ELLA+ LRTG++ + VLTLA ++L +F L L + E+ + + Sbjct: 13 PRERLISEGASSLSNRELLAILLRTGSKEESVLTLADKILRHFDGLRMLRDATMEEITSI 72 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 HG+GVAK +QL EL RR + + + SPE ++ ++ ++E F+ ++L+ Sbjct: 73 HGVGVAKASQLIAAFELGRRMVRLEYQHRYSIRSPEDCASYMMEEMRFLQQENFVCLYLN 132 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSG 176 ++++V+ + +F G+LN VHPRE+ +EA + A+++I HNHPSG Sbjct: 133 TKNQVMHRQTVFIGSLNASIVHPREVFKEAFRRAAASIICLHNHPSG 179 >UniRef50_B7ANR2 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ANR2_9BACE Length = 246 Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 74/219 (33%), Positives = 115/219 (52%), Gaps = 6/219 (2%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLE----NFGS--LYGLLTSEY 63 P EK + +G AL+D ELLA+ ++TGT G + LA +++ GS L GL Y Sbjct: 24 PYEKFMLYGAGALSDAELLAVIIKTGTTGISSIELAAGIIDMACNGSGSTNLAGLTGIGY 83 Query: 64 EQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIF 123 E + GIG K Q+ + EL+RR +P ++ L E E Sbjct: 84 EDLVSIRGIGSVKALQIMAVIELSRRISKSCAYRRLDFRNPVSIADYYMEDLRHAECERL 143 Query: 124 MVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKA 183 +++ LD++ R+I + +GT+N V PREI A++ A +++ HNHPSG AEPS Sbjct: 144 VLVMLDTKLRLIKDEIISTGTVNASIVSPREIFVAALRAGAVFIVMLHNHPSGDAEPSSN 203 Query: 184 DKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 D IT R+ + + + + ++DHI+IG +VS E G + Sbjct: 204 DIAITRRVQLAGEMLGISLIDHIIIGDNRFVSLKESGLM 242 >UniRef50_UPI000185C66E DNA repair protein RadC n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185C66E Length = 221 Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 74/217 (34%), Positives = 115/217 (52%), Gaps = 1/217 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLL 59 +KN PREKM+ G +AL++ ELLA+ L +G+ + + L++ +L + G SL L Sbjct: 3 IKNWEDTDKPREKMITQGKTALSNAELLAILLGSGSANESAVALSRRILASVGNSLTALG 62 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 Q + GIG AK + E+ RR + + +P +Q + Sbjct: 63 KQTLAQLTTFKGIGEAKAITILAATEMGRRRAAETHEPQPKIEAPRHVFTLMQPLIGDLP 122 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 E F V++L+S +RVI RL SG + H V R + + A++ A +LIL HNHPSG Sbjct: 123 HEEFWVLYLNSANRVIHKCRLSSGGITHTTVDIRLLFKNALEQGAVSLILVHNHPSGSTT 182 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSF 216 PSK D +TER+ + +D+++LDHI++ EY S Sbjct: 183 PSKEDLELTERVRNAGDTLDIKLLDHIIVTEKEYYSI 219 >UniRef50_A1UT15 DNA repair protein, RadC family n=3 Tax=Bartonella RepID=A1UT15_BARBK Length = 265 Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 119/207 (57%), Gaps = 2/207 (0%) Query: 11 REKMLKFGISALTDVELLALFL-RTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 R++ L +A+ D E L L L RT R D +AK+++E FGSL +L ++ + + Sbjct: 54 RKRFLDTKGNAIEDYEYLELLLFRTIPRA-DTKPIAKKLIERFGSLADVLGADIHRLQEI 112 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G G A LK I+ +A R+ ++ + S + + ++ + E RE F ++FLD Sbjct: 113 EGCGPASAIDLKIISAVAGRFARAQLSKRDIFSSWDKVLAYCKAVMAHETREQFRILFLD 172 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 +H +++ +GT++ V+PRE++ A++++AS +IL HNHPSG A PS+ D +T Sbjct: 173 KKHGLLSDEVQQTGTIDRTPVYPREVVSRALELSASGIILVHNHPSGDASPSQEDISMTY 232 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSF 216 R+ +D+ + DH++I R +Y+SF Sbjct: 233 RLKDVANALDITLHDHLIIARNDYISF 259 >UniRef50_C4SWK5 DNA repair protein n=1 Tax=Yersinia intermedia ATCC 29909 RepID=C4SWK5_YERIN Length = 152 Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 56/122 (45%), Positives = 84/122 (68%) Query: 101 LLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAI 160 + S E RE+L+ +L E E+F V+ LD+QHR++ + LF GTLN V ++PREI++ ++ Sbjct: 31 MFSTEAVREYLKFKLAPLEHEVFSVLLLDNQHRILAYEELFRGTLNAVSIYPREIVKLSL 90 Query: 161 KINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 + NA A+IL HNHPSG EPS ADK IT ++ +D++VLDH+++ + VS AERG Sbjct: 91 RYNAGAIILVHNHPSGEPEPSHADKEITNKLKSVLGLLDVQVLDHLIVAGTQVVSLAERG 150 Query: 221 WI 222 + Sbjct: 151 LV 152 >UniRef50_B0N2U6 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N2U6_9FIRM Length = 225 Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 118/213 (55%), Gaps = 1/213 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PREK GI +L ++ELLAL LRTG + + + LA+ ++ G L Y Q + Sbjct: 12 PREKAFHHGIESLNNIELLALVLRTGNKQESAIELAQRVINEIGGFRYLHDINYYQLIQI 71 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 GI AK ++ I E+A+R + + S + P E L++QL E++E +V+ L+ Sbjct: 72 KGIKQAKAIEVLAIIEIAKRL-DKQPVAMSAIKEPRDGYELLKNQLMFEQQEKVIVLCLN 130 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 S+ VI + +F G N + RE+ +EA+ ++ +++ HNHPSG EPS D TE Sbjct: 131 SRLEVIKEKTVFIGGNNISIISGRELFKEALICGSNRVMVVHNHPSGNPEPSIEDIEATE 190 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 R+ + +D+ V+DH++IGR + SFA I Sbjct: 191 RLYSMAKELDIDVVDHLIIGRSRFYSFASNKII 223 >UniRef50_Q18B06 UPF0758 protein CD1144 n=8 Tax=Clostridiaceae RepID=Y1144_CLOD6 Length = 235 Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 66/185 (35%), Positives = 111/185 (60%), Gaps = 2/185 (1%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLE-NFGSLYGLLTSEYEQFSG 68 PREKML G+ +L++ ELLA+ LRTG + K+ + LA ++ + + L E+ Sbjct: 23 PREKMLAKGVKSLSNAELLAILLRTGNKNKNAIELANYIINRDIQGIRHLEDMTIEELCN 82 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 + GIG++K Q+K EL R + + + +++P + + L ++E+F + L Sbjct: 83 IDGIGLSKSTQIKAALELGSRVASFKPIKYK-IMNPWDIQRYYMDSLRYLKKEVFKAVLL 141 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 ++++ +I+ + GTL+ VHPRE+ +EAI+ +AS +I+ HNHPSG EPS+ DK IT Sbjct: 142 NTKNEIISDVDVSIGTLSSSLVHPREVFKEAIRRSASKIIVMHNHPSGSVEPSREDKNIT 201 Query: 189 ERIIK 193 R+IK Sbjct: 202 SRLIK 206 >UniRef50_Q8RF15 UPF0758 protein FN0909 n=11 Tax=Fusobacterium RepID=Y909_FUSNN Length = 232 Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 73/219 (33%), Positives = 114/219 (52%), Gaps = 7/219 (3%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 REK GI + E+L L L KD +AKE+L F SL + + +++ S + Sbjct: 14 REKFFNNGIDGFAEYEILELLLTYCIPRKDTKPIAKELLNKFKSLDNVFKASFDKLSTID 73 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMR-------EESPLLSPEMTREFLQSQLTGEEREIF 123 G+G LK + EL Y ++ E + + ++ ++L++++ EE E F Sbjct: 74 GLGKNSITFLKLLGELPSIIYKDELKNKKLIDKETLKISNKDILLKYLRNKIGYEEIEKF 133 Query: 124 MVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKA 183 VI+L S + VI GTL+ V+PREI ++ I +NA ++ILAHNHPS PSK+ Sbjct: 134 YVIYLSSSNEVIEFEENSVGTLDRSSVYPREIYKKVINLNAKSIILAHNHPSDNITPSKS 193 Query: 184 DKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 D +T I K + +++HI+I + Y SF E G I Sbjct: 194 DIELTNEIAKGLKNFGALLIEHIIITKNSYFSFLEEGLI 232 >UniRef50_B1JAY7 DNA repair protein RadC n=4 Tax=Pseudomonas RepID=B1JAY7_PSEPW Length = 164 Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 51/122 (41%), Positives = 89/122 (72%) Query: 101 LLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAI 160 L++P +L+ QL E+F ++ LDS+HRV++ LF+G+++ V+PR+++ +A+ Sbjct: 43 LITPADAAAYLKLQLAPYHHEVFALLCLDSRHRVLSFDILFTGSIDGASVYPRQVVIKAL 102 Query: 161 KINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 + NA+A+I +HNHPSGC+EPS AD+++T R+ ++ +++RVLDHI++G G +S AE G Sbjct: 103 ERNAAAVIFSHNHPSGCSEPSGADRVLTTRLTEALALVEVRVLDHIIVGEGTPLSLAEYG 162 Query: 221 WI 222 W+ Sbjct: 163 WM 164 >UniRef50_Q2S042 UPF0758 protein SRU_2338 n=1 Tax=Salinibacter ruber DSM 13855 RepID=Y2338_SALRD Length = 233 Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 121/218 (55%), Gaps = 5/218 (2%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKD----VLTLAKEMLENFGSLYGLLTSEYEQ 65 PREK+L G + L+D E+LAL L +GTR D + L + +L+++GSL+ + + ++ Sbjct: 15 PREKLLTHGPTVLSDAEVLALLLGSGTRTSDGPVSAVELGRALLQSYGSLHEVSQRKPKE 74 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREES-PLLSPEMTREFLQSQLTGEEREIFM 124 + G+G AK +L E RR + R ++E + P + L ++E+F Sbjct: 75 LTRTRGVGPAKATKLAAAFEAGRRVESQRQQDERMQVTCPADVADVYGPLLRDLDKEVFK 134 Query: 125 VIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKAD 184 V+ L++ + +I + G L+ V PR + +AI +A+A+I HNHPSG EPS+ D Sbjct: 135 VVHLNTANVIIGDYTVSEGGLSSSVVEPRGVFEQAILDDAAAVICLHNHPSGNPEPSRED 194 Query: 185 KLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 IT ++ ++ M + V DH++I ++ S AERG I Sbjct: 195 IRITRQLAEAGGTMGIPVHDHLIIAGTKHTSLAERGVI 232 >UniRef50_UPI0001BC61BD DNA repair protein radC n=3 Tax=Fusobacterium RepID=UPI0001BC61BD Length = 227 Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 64/214 (29%), Positives = 121/214 (56%), Gaps = 2/214 (0%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 R++ L+ G S+L + E+L L L KD L+KE+L FG+L + ++ E+ + Sbjct: 14 RKRYLERGFSSLQEYEVLELLLTYALPRKDTKALSKELLHRFGTLSAVCKAKTEELQSIK 73 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPL--LSPEMTREFLQSQLTGEEREIFMVIFL 128 GI L + +L + + ++EE + E ++++Q+ E RE F V+FL Sbjct: 74 GIKENTSILLHFVGDLQKELFRNSLQEEKNIHIQRKEDLISYVRAQIGFENREKFFVLFL 133 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 ++ ++++ LF G+++ V+PREI+ + +K A ++I AHNHPSG +PS+ D +T Sbjct: 134 NTANQLLCSEELFQGSIDRSAVYPREILEKVLKYKAKSVIFAHNHPSGNTQPSRQDIALT 193 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + + + + D+ +++HI++ + Y SF E G + Sbjct: 194 KEMKDALRMFDVLLIEHIIVSKHSYFSFLEEGLL 227 >UniRef50_Q47ZW8 DNA repair protein, RadC family protein n=20 Tax=Gammaproteobacteria RepID=Q47ZW8_COLP3 Length = 158 Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 58/120 (48%), Positives = 85/120 (70%), Gaps = 1/120 (0%) Query: 103 SPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKI 162 S + T++FL+ +L +E EIF V+ LD+QH++I LF GT++ V+PRE+++ + Sbjct: 40 SSQATKDFLRFKLANKEHEIFAVMLLDNQHQMIDFVELFRGTIDASAVYPREVVKTVLLE 99 Query: 163 NASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 NA+A+IL HNHPSG PS ADK IT+R+ ++ +D+RVLDHI+IG G Y SFAE G + Sbjct: 100 NAAAVILTHNHPSGLNSPSIADKDITKRLQEALALIDVRVLDHIIIGEGTY-SFAENGLL 158 >UniRef50_B2V8J4 DNA repair protein RadC n=5 Tax=Aquificales RepID=B2V8J4_SULSY Length = 229 Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 ++PREK LK G S L+D ELLA+ L +GT+G +V+ LA+++L N S L + Sbjct: 19 MLPREKALKGGFSFLSDEELLAISLGSGTKGINVIGLAQKIL-NGKSFKDLKDITLDDLK 77 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 + GIG AK Q+ I E+A+R + E+ + S +L+ L+ E +E + ++ Sbjct: 78 KIKGIGEAKALQILAIIEIAKRMDD--HAEKIKITSVSDAFNYLKF-LSKETQEHMVALY 134 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 L+S + +I + G+LN V V PR+I+ AIK N + +I++HNHP+ PS+ D Sbjct: 135 LNSSNHLIAQEVIAKGSLNVVRVLPRDILYYAIKHNCNGIIISHNHPNNDPTPSQEDIEF 194 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 T+++ + +LDHI++G+ ++ SFA+ G I Sbjct: 195 TKKLQTLANELGFDLLDHIIVGKKDFYSFAKAGLI 229 >UniRef50_B4Y2Y7 RadC n=1 Tax=Aquabacterium sp. PL1F5 RepID=B4Y2Y7_9BURK Length = 198 Score = 122 bits (306), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 57/138 (41%), Positives = 89/138 (64%) Query: 85 ELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGT 144 EL R +M E + SP++ +++L G E E+F+V++LD+Q +I LF GT Sbjct: 61 ELLLRNMRSKMLEGPVMASPKVVKDWLSMYCAGLEHEVFLVLYLDAQQVLIEAEELFRGT 120 Query: 145 LNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLD 204 L V+PRE+++ A+ NA+A++LAHNHPSG PS AD+L+T+ + S +D+RVLD Sbjct: 121 LTQTSVYPREVVKNALAHNAAAVLLAHNHPSGQLSPSGADELLTQTLKSSLMMVDVRVLD 180 Query: 205 HIVIGRGEYVSFAERGWI 222 H ++G +SFAE+G + Sbjct: 181 HFIVGGDRVLSFAEQGLL 198 >UniRef50_Q2G8R8 DNA repair protein RadC n=5 Tax=Sphingomonadales RepID=Q2G8R8_NOVAD Length = 245 Score = 122 bits (306), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 121/212 (57%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 R++++ G AL D E++ L D +A+ +++ FGSL G+L ++ + + Sbjct: 34 RKRLMAGGEDALADHEVIEYLLMVARPRIDTKPIARSLVQRFGSLAGVLNADPQALALHP 93 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 +G A L+ +A ARR +RE+ L + + ++L + E V++L+S Sbjct: 94 NMGETSAAALRIVALAARRLARTVVREQPILSNWQALLDYLHIDMAHLTVERVRVLYLNS 153 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 Q+ +I + GTL+ ++ RE+IR+A+ + A+A+IL HNHPSG +PS+AD +T++ Sbjct: 154 QNMLILDHLVSEGTLDESPIYTREVIRKAMDVGAAAMILVHNHPSGSPKPSRADIQVTQK 213 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++++ + M + V DHIVIGR + S +G I Sbjct: 214 VMEAARLMGMTVHDHIVIGREGHTSLKAQGLI 245 >UniRef50_A1TJG0 DNA repair protein RadC n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TJG0_ACIAC Length = 167 Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 56/125 (44%), Positives = 85/125 (68%) Query: 98 ESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIR 157 E+ + +P ++L+ +L GE E+F V+FLD Q+R I LF GT+N V+PR I++ Sbjct: 43 EAAISTPRELYDYLRLKLAGELHEVFGVVFLDCQNRAIAFEALFRGTINQAVVYPRVIVK 102 Query: 158 EAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFA 217 A+ +NAS++IL HNHPSG ++ S AD+ +TERI S +D+RV+DH+++G G SFA Sbjct: 103 RAMDLNASSVILVHNHPSGTSQCSDADRGLTERICASLGLIDVRVVDHVIVGSGTPYSFA 162 Query: 218 ERGWI 222 E G + Sbjct: 163 EAGLL 167 >UniRef50_Q2J299 UPF0758 protein RPB_0700 n=15 Tax=Alphaproteobacteria RepID=Y700_RHOP2 Length = 250 Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 64/199 (32%), Positives = 115/199 (57%) Query: 18 GISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKF 77 G +AL+D ELL L L +DV LAK ++ FGS + + + V G+G A Sbjct: 46 GAAALSDYELLELVLFRALPRRDVKPLAKALIARFGSFAETMQAPEPRLREVSGLGEAAI 105 Query: 78 AQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITH 137 ++K +A A R +++ + L S ++ ++ + +RE F ++FLD ++++I Sbjct: 106 TEIKLVAAAAARVTKGQVKSRTVLSSWSAVIDYCRTTMAFADREQFRILFLDKRNQLIAD 165 Query: 138 RRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQF 197 GT++H V+PREI++ A++++A+A+I+ HNHPSG PS+AD +T+ I+ + Sbjct: 166 ELQQVGTVDHTPVYPREIVKRALELSATAVIMVHNHPSGDPTPSQADIQMTKTIVAIAEP 225 Query: 198 MDLRVLDHIVIGRGEYVSF 216 + + V DHI++G+ + S Sbjct: 226 LGVAVHDHIIVGKNGHASL 244 >UniRef50_C3WLA1 DNA repair protein radC n=2 Tax=Fusobacterium RepID=C3WLA1_9FUSO Length = 242 Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 73/215 (33%), Positives = 113/215 (52%), Gaps = 3/215 (1%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 R++ L GI + +D E+L L +D +AK +L+ F SL + ++ ++ + Sbjct: 28 RKRFLDKGIHSFSDYEILEFLLFYCNAQEDTKPIAKAILKEFKSLNRVFKADIKELEKIK 87 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESP---LLSPEMTREFLQSQLTGEEREIFMVIF 127 GIG +K + EL Y ++ E+ + E +FL++++ E+ E F VI+ Sbjct: 88 GIGPISAILIKFVGELLTELYGENLKIETKADKITDKEALLKFLRNKIGYEDVEKFYVIY 147 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 L S + VI SGTL+ ++PREI + I NA ++I+AHNHPSG PSK D I Sbjct: 148 LSSSNEVIAFEESSSGTLDRSSIYPREIYKRVIMENAKSIIIAHNHPSGNTCPSKCDIDI 207 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 T I K + +L+HI+I R Y SF E G I Sbjct: 208 TNEIAKGLKNFGALLLEHIIITRDSYFSFLEEGLI 242 >UniRef50_Q1DAY3 DNA repair protein RadC n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DAY3_MYXXD Length = 241 Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 1/210 (0%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 RE++ + G +ALTD ELL + +G R +A +L G L GL+ E S Sbjct: 13 RERLFRLGAAALTDPELLCVVWSSGPRAPGAWAVAGALLSEGGGLKGLVQQEPLALSLRP 72 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+G + AQ EL RR R R L +P+ +L L RE+F V+ ++ Sbjct: 73 GVGPVRAAQALAALELGRRSQRARERRPR-LRTPKEIAAYLAPVLGALRREVFHVLCFNA 131 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++ ++ R+ GT+N V PRE+ A+ A++++LAHNHPSG EPS D +T Sbjct: 132 RNVLVHDARVAEGTMNTCPVDPREVFAAALTSRATSIVLAHNHPSGDPEPSVQDLGLTRH 191 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 ++ Q ++++VLDH+V+G G YVS ERG Sbjct: 192 LVAGAQLLNIKVLDHVVMGDGGYVSMLERG 221 >UniRef50_A7FEQ9 DNA repair protein, RadC family n=4 Tax=Yersinia RepID=A7FEQ9_YERP3 Length = 162 Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 60/148 (40%), Positives = 95/148 (64%), Gaps = 2/148 (1%) Query: 76 KFAQLKGIAE-LARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRV 134 FAQ + I++ LA +R R + L SPE + +LQ L + RE FMV+FLD++HR+ Sbjct: 14 PFAQQQIISQALAILEIQLRHRPYT-LTSPEAVKAWLQLHLRPQGRECFMVLFLDNRHRL 72 Query: 135 ITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKS 194 + + GT N V+PRE++ A+ +A+++AHNHP+G PS+AD+ +T +++ + Sbjct: 73 MASETVSVGTFNATTVYPREVVIRALHHRCAAVVIAHNHPAGDPTPSQADRTLTAQLVNA 132 Query: 195 CQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +D+RVLDH++IG E VS AE GW+ Sbjct: 133 LNMVDIRVLDHLIIGESEPVSLAELGWL 160 >UniRef50_A8ZUS2 DNA repair protein RadC n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUS2_DESOH Length = 253 Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 111/212 (52%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 REK L G+S D E++ L L T KD AK + F +L G+L + E + Sbjct: 17 REKFLASGLSGFHDYEIIELLLTLATPRKDCKAPAKAAMAEFKTLQGVLNAAPEALCRID 76 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 GIG ++ + +A R + L + +L L RE F IF+D+ Sbjct: 77 GIGPKNLFGIRLVKAVADRCLEKELVGRPLLANSTDLLNYLNHTLRDRHRETFAAIFMDA 136 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++RVI L G+L V+PRE++ A+ +A+ALI HNHPSG EPS+ D IT + Sbjct: 137 KNRVIVVETLSEGSLTESPVYPREVVARALAHHAAALICCHNHPSGEPEPSRQDIAITRK 196 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++ +C+ M + V +HI++G + SFA+ G++ Sbjct: 197 LVMACKTMGITVHEHIIVGERGHFSFADNGYM 228 >UniRef50_D1QST5 DNA repair protein RadC n=13 Tax=Bacteroidales RepID=D1QST5_9BACT Length = 234 Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 116/215 (53%), Gaps = 7/215 (3%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEML----ENFGSLYGLLTSEYEQ 65 PREK+ + G SAL++ ELL + + +GT + + L K ++ N +L L + EQ Sbjct: 21 PREKLERLGPSALSNAELLGILIGSGTPNESAVDLMKRIMMDCNNNLNTLGKLSIRQLEQ 80 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMV 125 + GV G AK + EL +R + E + S + E+L ++ + E V Sbjct: 81 YKGV---GPAKAITILAACELGKRRAMEKAEERQSIDSSKAIYEYLHPRMQDLDVEEAWV 137 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 + L+ +++I R+ G ++ V R I++EA+ NA+ L LAHNHPS A+PS D Sbjct: 138 MLLNQHYKLIKALRISHGGISETAVDVRIILKEALLCNATVLALAHNHPSNHAQPSGPDD 197 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 +T+R+ K+C+ + + LDH++I G Y S+ + G Sbjct: 198 QLTQRVKKACEALRIYFLDHVIITDGTYYSYHDSG 232 >UniRef50_UPI00016C0069 DNA repair protein RadC n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0069 Length = 225 Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 69/218 (31%), Positives = 120/218 (55%), Gaps = 3/218 (1%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEML-ENFG--SLYGLLTSEYE 64 ++P E++++ G L+D++L+ + L G + V LAK +L + G L L +Y+ Sbjct: 1 MIPHERLVEDGACELSDIDLMTILLHNGIADQSVRDLAKLLLTDKHGEIQLKTLKDLKYD 60 Query: 65 QFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFM 124 + GIG K QL I E+A+R + + + L +PE + + +E+F Sbjct: 61 TLKSIKGIGKMKAIQLVAIVEIAKRLHVPKPMQLIDLKNPEDVAGLFVEEFENKFQEMFY 120 Query: 125 VIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKAD 184 ++LDS+ +I + GTLN VH R++ R AI++ A++LI+ HNHPSG EPSK D Sbjct: 121 ALYLDSKLGLIKKHCISIGTLNMTIVHARDVFRPAIEVCANSLIVVHNHPSGDPEPSKQD 180 Query: 185 KLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 IT + + + + +LDH+++G G++ S + G + Sbjct: 181 ITITRDLQFVGEVIKIPLLDHVIVGDGDFRSLRQMGIL 218 >UniRef50_D0LGP2 DNA repair protein RadC n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LGP2_HALO1 Length = 226 Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 117/210 (55%) Query: 9 MPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSG 68 +PRE+ L +G +++ ELLAL L TGTRG++VL LA+ +L G L L + + Sbjct: 12 LPRERFLAYGGERVSNAELLALILGTGTRGRNVLELAEHLLHALGGLPQLARAAPSELLE 71 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 V GIG A+ +++ L RR + +P E L+ +L G +E+F+VI L Sbjct: 72 VPGIGAARASRVAATFHLGRRALEASAAAPVVVRNPRDLYERLRLRLRGLSQEVFLVIAL 131 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 D ++ +I + G L V+VHPRE+ R I+ A+A ++AHNHPSG PS D +T Sbjct: 132 DPRNVIIEEIEVARGCLTGVDVHPREVFRPLIRRGAAAAVVAHNHPSGDPAPSAEDIALT 191 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAE 218 R+ ++ + + +LDH+V+G S E Sbjct: 192 RRLCEAGDLLGIPLLDHLVLGACNCASVFE 221 >UniRef50_Q1RK76 DNA repair protein RadC n=11 Tax=Rickettsia RepID=Q1RK76_RICBR Length = 249 Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 67/206 (32%), Positives = 112/206 (54%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 +E+ + G + +D ELL L L + KDV LAK++LENF S+ L+ + E+ + Sbjct: 38 KERFVTSGAANFSDYELLELMLFSSIPRKDVKPLAKKLLENFNSITDLINIDKERLLSIS 97 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G + + EL R ++ ++ + S ++L+ + E F V+FL+ Sbjct: 98 GTNENLYINFAIVRELINRALKQKIINKNIIASWGSLIDYLKVNMGNMRLEQFRVLFLNK 157 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++ +I L GT++ V+PREII+ A+ AS +IL HNHPSG +PSKA +T Sbjct: 158 KNILIADEVLSQGTIDQAAVYPREIIKRALFNEASNIILVHNHPSGSPDPSKAGIDMTNI 217 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSF 216 I+ C+ +++ V DH++I +Y SF Sbjct: 218 IVDMCKTINIIVHDHVIISNNKYFSF 243 >UniRef50_A5FMW5 UPF0758 protein Fjoh_0413 n=33 Tax=Bacteroidetes RepID=Y413_FLAJ1 Length = 229 Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 71/223 (31%), Positives = 125/223 (56%), Gaps = 6/223 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEML---ENFGSLYG 57 +K+ S+ PREK++ G AL+D EL+A+ + +G+R + + L++ +L +N SL+ Sbjct: 8 IKDWSEDDKPREKLMLKGKEALSDAELMAILIGSGSRNESAVALSQRILASAKNLNSLWK 67 Query: 58 LLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTG 117 + S+ +F GIG AK + EL RR + + + S + +Q + Sbjct: 68 MSVSQLIKF---KGIGEAKAVSIVAALELGRRQRAEDILKLKKITSSKDAFTIMQPIIGE 124 Query: 118 EEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGC 177 E F V+FL++ ++VI+ +L G + V R + + ++ A+ LIL HNHPSG Sbjct: 125 LPHEEFWVLFLNNSNKVISKAQLSKGGIAGTIVDVRLVFKLGLENGATGLILCHNHPSGE 184 Query: 178 AEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 PS+ADK IT++I + + +D+++LDH++I +Y SF + G Sbjct: 185 LNPSQADKQITKKIKTAGEILDVKILDHLIITETKYYSFVDEG 227 >UniRef50_B1ZYU3 DNA repair protein RadC n=3 Tax=Verrucomicrobia RepID=B1ZYU3_OPITP Length = 199 Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 67/164 (40%), Positives = 103/164 (62%), Gaps = 2/164 (1%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 P+E++ +FG +AL+D ELLA+ LR+GT G+DVLTLA ++ GSL GL+ + F + Sbjct: 7 PQERLEQFGPTALSDTELLAMLLRSGTHGQDVLTLATRLIAEAGSLAGLIAWKESDFRRL 66 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLS-PEMTREFLQSQLTGEEREIFMVIFL 128 GIG K QL + E+A+R ++ EESP+L+ ++ + L G + E F V+ L Sbjct: 67 KGIGRVKALQLVTVVEIAKRVL-IQKSEESPVLNRADLVADHLFPLARGLQVEKFWVLCL 125 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHN 172 + ++R++ + SGT HPRE+ REAI+ +ASA+I AHN Sbjct: 126 NRKNRLLRRVEVTSGTATAALAHPREVFREAIRESASAVICAHN 169 >UniRef50_Q7MVX9 UPF0758 protein PG_0894 n=24 Tax=Bacteroidales RepID=Y894_PORGI Length = 227 Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 114/216 (52%), Gaps = 3/216 (1%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENF-GSLYGLLTSEYEQFSG 68 PREKM++ G LTD ELLA+ + +G + + LA+E+L SL L + ++ +G Sbjct: 12 PREKMIRLGARCLTDAELLAILIGSGNDRQTAIQLAQEILAKMDNSLPRLAKCDIQELTG 71 Query: 69 -VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 G+G AK + EL+RR + M + M + LT +E V+ Sbjct: 72 SFRGMGPAKAVTVMAAMELSRRIPSQEMPRRESITDSRMAYRTISPFLTDLPQEEMWVLL 131 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 L+ ++I+ L G ++ R I+ +A+ ASA+ILAHNHPSG PS+ D + Sbjct: 132 LNQSGKIISMENLSRGGVSETSADVRLIMHKAVSHLASAIILAHNHPSGTVRPSEQDIQL 191 Query: 188 TERIIKSCQFMDLRVLDHIVIG-RGEYVSFAERGWI 222 T+R+ K+ + R+ DH++IG G Y SFA+ G + Sbjct: 192 TQRVQKAATLLGFRLNDHLIIGDDGAYFSFADEGLL 227 >UniRef50_B1C9I2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9I2_9FIRM Length = 224 Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 75/226 (33%), Positives = 128/226 (56%), Gaps = 6/226 (2%) Query: 1 MKNNSQLLMP-REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGL 58 MK++ ++L E++ G+ LTD EL+AL +R G K VL L+ ++ +G SL L Sbjct: 1 MKSDKEILSGIEERLYDEGVGELTDSELVALIIRKGDSTKSVLELSNNIIRRYGASLRDL 60 Query: 59 LTSEYEQFSGVH-GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMT-REFLQSQLT 116 + E+ + G+ K + E+ RR Y +E+ +++ M + L ++ Sbjct: 61 IGITREELKNDNPGMTDLKCDMILASLEIGRRAY--LKKEKQKIITCVMDIVDLLSYDMS 118 Query: 117 GEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSG 176 + E F VI L++++ VI + GT+N VH RE+ R AIK NA+++ILAHNHPSG Sbjct: 119 FLDEEHFKVILLNTKNMVIETELISIGTINTSLVHVREVFRNAIKKNANSIILAHNHPSG 178 Query: 177 CAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + PS D+ +T+R+ + + + ++V+DH++IG+ Y SF E + Sbjct: 179 DSTPSIEDEHLTKRLKDAGELIGIKVIDHVIIGKDNYFSFMEENML 224 >UniRef50_C1SJ65 DNA repair protein radc n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJ65_9BACT Length = 221 Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 68/196 (34%), Positives = 109/196 (55%), Gaps = 2/196 (1%) Query: 21 ALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQL 80 +L D E+L L L RG+DV AKE+LE GSL +L + + G+ F + Sbjct: 22 SLYDYEVLELLLGYVLRGRDVKPQAKELLERAGSLSAILGYDTKNIKGLGEEAQMFFGAI 81 Query: 81 KGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRL 140 + AR Y RE + PE +FL+ ++ +++E F+ +FLD +++ L Sbjct: 82 REF--FARLGYEDIDREAVIIDKPEKAAQFLKYKIAYDKKEHFVALFLDVNKKLLGFENL 139 Query: 141 FSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDL 200 F GT++ + V+PREI AI A+ +I+AHNHPSG PS+ D +T+++IK+ +D+ Sbjct: 140 FKGTVDRLAVYPREIAERAITSKATHVIVAHNHPSGNMSPSETDITLTDKLIKALAALDI 199 Query: 201 RVLDHIVIGRGEYVSF 216 + DHI+I + SF Sbjct: 200 NLADHIIITTKGFYSF 215 >UniRef50_Q8VR59 Putative intergenic-region protein n=24 Tax=Escherichia RepID=Q8VR59_ECOLX Length = 260 Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 57/127 (44%), Positives = 87/127 (68%), Gaps = 10/127 (7%) Query: 103 SPEMTREFLQS---------QLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPR 153 +PEM ++ + S Q G E F V++L++Q+++I LF+GT+N EVHPR Sbjct: 133 APEMVKKAVHSIAERDVSVLQAFGVRME-FRVLYLNNQNKLIAGETLFTGTINRTEVHPR 191 Query: 154 EIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEY 213 E+I+ A+ NA+A++LAHNHPSG PSKAD+LITER++++ +D+RV DH+++G + Sbjct: 192 EVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGSQV 251 Query: 214 VSFAERG 220 SFAE G Sbjct: 252 FSFAEHG 258 >UniRef50_C6BYC2 DNA repair protein RadC n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BYC2_DESAD Length = 225 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 110/212 (51%), Gaps = 1/212 (0%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 +EK+ K S L D E+L L L +D LAKE+L FG L G+ + EQ Sbjct: 15 KEKLGKDSTS-LADYEILELLLGQVLPRRDTKPLAKELLAEFGGLSGVFRAPEEQLKKFK 73 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 GIG + E R M + + SP++ + +++ +E F + +++ Sbjct: 74 GIGPGVLIFFTLMREFWTRIAEEPMNGKEAISSPDVVYKAAMARIGNLSKEEFWIALVNN 133 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 +++VI RL GT++ V+PRE++ A++ NAS +IL HNHP G PS D T Sbjct: 134 RNKVICWERLSEGTVDKTAVYPREVVALALRHNASGVILTHNHPGGDPSPSPEDTERTME 193 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 I CQ M++R+LDH+++ + SF E G++ Sbjct: 194 IAALCQDMEIRLLDHVIVTADRFHSFKEAGYL 225 >UniRef50_A0L491 DNA repair protein RadC n=4 Tax=Bacteria RepID=A0L491_MAGSM Length = 241 Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 116/213 (54%), Gaps = 1/213 (0%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 R + + G+ D ++L L L +D +A +++ FGSL ++ ++ + V Sbjct: 23 RNRFAQEGLDGFEDHQILELALFYALPRRDTNPIAHRLMQRFGSLSAVMEADPVDLATVE 82 Query: 71 GIGVAKFAQLKGIAELARRY-YNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+G + + L RRY ++ R ++PL + R++L + G E+F V+ LD Sbjct: 83 GMGETAALFITMLPALTRRYQHDAATRNKTPLNRADNVRDYLVPLMAGRTEEVFYVLCLD 142 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 +Q R++ + GT+ VHPR+++ I+ A+ +ILAHNHPSG + S+ D L+T Sbjct: 143 AQCRLLFPALVTEGTIRQAHVHPRQVVELVIRHKAAHVILAHNHPSGNPKASQDDILLTS 202 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++++ +D++VLDH++I + SFA G + Sbjct: 203 HLMQALNPIDVQVLDHLIIAGEKVFSFASAGMM 235 >UniRef50_A1K759 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=A1K759_AZOSB Length = 196 Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 55/136 (40%), Positives = 89/136 (65%) Query: 85 ELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGT 144 E+ R + ++ + L SP + R+FL++ G+ EIF+V++LD+Q+R+I F GT Sbjct: 59 EILHRSFAEQLSARNVLDSPGVVRQFLRTFFEGKPYEIFVVLYLDAQNRLIRAEEAFRGT 118 Query: 145 LNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLD 204 L V+PREI+R +++++A+ +I +H HPSG EPS AD+++T + + +D+RVLD Sbjct: 119 LTQTSVYPREILRRSLELHAAGVIFSHQHPSGVCEPSSADEVLTNMLKSALTLVDVRVLD 178 Query: 205 HIVIGRGEYVSFAERG 220 HIV+ VSFAE G Sbjct: 179 HIVVAGDRAVSFAETG 194 >UniRef50_Q4QPE3 Putative DNA repair radC-like protein n=5 Tax=Haemophilus influenzae RepID=Q4QPE3_HAEI8 Length = 156 Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 54/136 (39%), Positives = 85/136 (62%), Gaps = 7/136 (5%) Query: 94 RMREESPLLS-------PEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLN 146 ++ EE P P + + + Q+ + EERE F+V+FLD HR+I +F G+++ Sbjct: 21 KVMEEKPFYQGAQEFTEPSIAKLYFQTIIGNEERENFVVLFLDRIHRLIKSEVMFQGSVS 80 Query: 147 HVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHI 206 V REIIR+A+K+NASA+I+ HNHP+G EPS ADK IT+R+ ++C+ MD+++LDH Sbjct: 81 ETSVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADKYITKRLKEACELMDIKLLDHF 140 Query: 207 VIGRGEYVSFAERGWI 222 ++ F + I Sbjct: 141 IVSGSASFCFTDNHLI 156 >UniRef50_B1HKP9 DNA repair protein n=1 Tax=Burkholderia pseudomallei S13 RepID=B1HKP9_BURPS Length = 165 Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 59/142 (41%), Positives = 89/142 (62%), Gaps = 4/142 (2%) Query: 81 KGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRL 140 IA L RR + + L SP+ ++L+ +T E+RE+F VIFLD+ HRVI L Sbjct: 28 DAIAVLERRLF----QRGPALTSPQNAIDYLRLTMTREDREVFTVIFLDTHHRVIAVEPL 83 Query: 141 FSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDL 200 F G ++ + R I+ AI +N++A+I+AHNHPSG +PS AD+ +T + + +D+ Sbjct: 84 FYGGIDGAHISSRVILHRAILLNSTAIIVAHNHPSGETQPSPADQRLTAELAALLRLVDM 143 Query: 201 RVLDHIVIGRGEYVSFAERGWI 222 R+LDH +IGRGE SFA+ G + Sbjct: 144 RLLDHFIIGRGEPFSFAQAGLL 165 >UniRef50_Q0BRK0 DNA repair protein radC n=5 Tax=Alphaproteobacteria RepID=Q0BRK0_GRABC Length = 271 Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 121/210 (57%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 R+++L G AL D E+L + L +D LAK++L +FGS ++++ + + + Sbjct: 60 RQRLLTHGPEALADYEMLEMLLFLALPRRDTKPLAKDLLNHFGSFAAVISASPRELTTIK 119 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+G A A L + + R + L + E +L + L E+ E F V+FLD+ Sbjct: 120 GVGEAGAAALALVRAASLRLLRADAVAQPVLNNWERLIAYLNASLAREKNEQFRVLFLDN 179 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++++I L GT+NH V+PRE+++ A++++A+ALI+ HNHPSG PS D +T Sbjct: 180 RNQLIADEILAHGTVNHAPVYPREVVKRALELHATALIVVHNHPSGDPTPSAEDIRMTRE 239 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 + ++ + + L + DH++IGR + SF ++G Sbjct: 240 LREAGRLLSLDLHDHVIIGRHGWSSFRKQG 269 >UniRef50_Q8UEZ6 UPF0758 protein Atu1607 n=100 Tax=Alphaproteobacteria RepID=Y1607_AGRT5 Length = 280 Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 61/178 (34%), Positives = 104/178 (58%) Query: 39 KDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREE 98 +D +AK ++ FG+L +L + V G+G A LK +A +++R +R + Sbjct: 97 RDTKPIAKALIARFGTLGSVLGAPLPLLQEVKGVGEAVALDLKLVASVSQRMLKSEIRNK 156 Query: 99 SPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIRE 158 L S ++ + + E RE F ++FLD ++ +I GT++H V+PREI+R Sbjct: 157 QVLGSWSSVIDYCHAAMAHETREQFRILFLDKRNVLIADEVQGQGTVDHTPVYPREIVRR 216 Query: 159 AIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSF 216 A++++++ALIL HNHPSG PS+AD +T+ II + + + + V DHI+IG+ + SF Sbjct: 217 ALELSSTALILIHNHPSGDPTPSRADIEMTKTIIDTAKPLGITVHDHIIIGKDGHASF 274 >UniRef50_A9IEU5 Putative DNA repair protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IEU5_BORPD Length = 174 Score = 115 bits (289), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 57/150 (38%), Positives = 93/150 (62%) Query: 73 GVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQH 132 G + AQ I +AR ++ L +P+ + FLQ +L G E E+ ++ LD Q Sbjct: 25 GAMRPAQRAEILAVARELVSIDTLHGEDLSNPDKAKAFLQLRLAGLEHEVCALMLLDVQL 84 Query: 133 RVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERII 192 R+IT+ F GTL+ V+PREI++ A++ NA+ L++AHNHPSG AE S+AD+ +T+ + Sbjct: 85 RLITYLEPFRGTLSQAPVYPREILKLALRHNAAGLMMAHNHPSGLAEASQADRQLTQAVQ 144 Query: 193 KSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++ +D+R+LDH ++ VS A+RG + Sbjct: 145 QALALIDVRLLDHFIVAGTTVVSMAQRGQL 174 >UniRef50_B4S9N8 DNA repair protein RadC n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S9N8_PROA2 Length = 165 Score = 115 bits (289), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 59/140 (42%), Positives = 89/140 (63%), Gaps = 8/140 (5%) Query: 91 YNVRMREESPL--LSPEMTRE------FLQSQLTGEEREIFMVIFLDSQHRVITHRRLFS 142 Y+VR+ ES + + P +TR F + L + E F ++LD+++++I + Sbjct: 26 YSVRLVRESSITFIHPAITRCDIAYDFFCKIGLQDKASEEFYALYLDTKNKIIGLEMISR 85 Query: 143 GTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRV 202 GTLN VHPRE+ + A NA++++LAHNHPSG EPS ADKL+T R++K+ + +DL+V Sbjct: 86 GTLNASLVHPREVFKGAFLANANSIMLAHNHPSGNTEPSSADKLVTSRLVKAGKLLDLQV 145 Query: 203 LDHIVIGRGEYVSFAERGWI 222 LDHI++G Y SF E G I Sbjct: 146 LDHIIVGDKGYYSFRESGLI 165 >UniRef50_C4TZV7 DNA repair protein radC n=2 Tax=Enterobacteriaceae RepID=C4TZV7_YERKR Length = 123 Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 54/116 (46%), Positives = 86/116 (74%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 + PREK+LK+G + LTD ELLA+FLRTG G V+ +A+ ++E FGSL+ L++++Y+ Sbjct: 8 IAPREKLLKYGAAVLTDAELLAIFLRTGIPGMHVMRMAEYLIEEFGSLHELISADYQVLC 67 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIF 123 GIGV+K++Q++ IAELA R ++ + ES LL+ ++T++FLQ+ L+ ERE+F Sbjct: 68 AKKGIGVSKYSQIQAIAELAGRCFSSHLMRESALLNADITQKFLQNILSHREREVF 123 >UniRef50_C9NPT2 DNA repair protein RadC n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPT2_9VIBR Length = 224 Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 88/144 (61%), Gaps = 2/144 (1%) Query: 78 AQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITH 137 A L+ ++ RY+ R + L +P + + + Q L +RE+F ++LD+ R + Sbjct: 82 AVLQEAKDIIARYWAAR--SPNVLNAPNLVKMYCQCHLAHVDREVFGALWLDNGLRALGT 139 Query: 138 RRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQF 197 LF+G+LNH VH RE++R +++NA+A+I HNHPSG PS+AD+ +T + Sbjct: 140 VDLFAGSLNHAAVHTREVLRSGLRLNAAAVIFYHNHPSGDPSPSQADRQLTNHLKDVLGQ 199 Query: 198 MDLRVLDHIVIGRGEYVSFAERGW 221 +++RVLDH+V+ VSFAERGW Sbjct: 200 IEIRVLDHMVVSLSGVVSFAERGW 223 >UniRef50_Q73P26 DNA repair protein RadC n=2 Tax=Treponema RepID=Q73P26_TREDE Length = 225 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 75/222 (33%), Positives = 122/222 (54%), Gaps = 9/222 (4%) Query: 2 KNNSQLLMP--REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLL 59 KN+S P RE++L++G L+D +L+A+ LRTG + K V LA +++ + Sbjct: 5 KNSSNTDKPDMRERLLEYGPQNLSDSDLVAILLRTGIKDKPVKELADDIILHIDRARPEK 64 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 Y + G+G +K + + EL RRYY+ + R S P LQ + Sbjct: 65 IEGY--LRSIRGMGDSKISTVLAAMELGRRYYDNKNRTIS---HPTDVVPLLQ-HYADRD 118 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 RE F+ + L+ + +I R + GT+N VHPRE+ + +K A+A+I AHNHPSG E Sbjct: 119 REHFICVSLNGANEIIATRVVSVGTINRTIVHPREVYSDPLKDRAAAIIAAHNHPSGNLE 178 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIV-IGRGEYVSFAERG 220 PS D +T+RI ++ + + +++LDHI+ + G + SF + G Sbjct: 179 PSSEDMELTKRIYEAGKILGIKLLDHIILVPNGNFFSFVQSG 220 >UniRef50_C9LCX8 DNA repair protein RadC n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LCX8_9BACT Length = 228 Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 113/213 (53%), Gaps = 3/213 (1%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENF-GSLYGLLTSEYEQFSG 68 PREK + G L+ ELLA+ + +G GKD + L KE+L + SL L + + Sbjct: 14 PREKFEELGPRQLSSAELLAILIGSGCPGKDAVVLMKEILNDHDNSLRRLGRVDIQSLCR 73 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLS-PEMTREFLQSQLTGEEREIFMVIF 127 GIG AK + EL RR E+ PL+ P+ F + +L E F +F Sbjct: 74 YAGIGPAKAITILAACELGRRRAE-EPAEQRPLMDGPQKIYSFFRQRLEDTPHEEFHAMF 132 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 L+ + ++++ + G L V R + +A++ A+AL + HNHPSG PS+AD + Sbjct: 133 LNRRLQLVSEALIGRGGLTETTVDVRLLFGKALEAKATALAICHNHPSGNPRPSQADDRL 192 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 T+++ ++ + +D+R++DHI++ Y S+ E G Sbjct: 193 TQKVAQAARLLDIRLVDHIIVADKCYYSYQEEG 225 >UniRef50_C9BR87 DNA repair protein RadC n=4 Tax=Enterococcus faecium RepID=C9BR87_ENTFC Length = 223 Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/168 (35%), Positives = 97/168 (57%) Query: 9 MPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSG 68 +PRE+M +G AL+D ELLA+ LRTG V+++A +L+ FG L L + + Sbjct: 14 LPRERMEIYGAEALSDQELLAILLRTGQHPYSVMSIAGNLLKTFGGLASLRQATLHELEE 73 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 + GIG K ++K + EL RR R P+ + + L ++ ++E + I+L Sbjct: 74 IRGIGRVKAIEIKALIELGRRIQTDHERAAPPVRTSYELAQQLILEMKDHKQEHLVCIYL 133 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSG 176 D++++VI + +F G+LN HPREI A++ A+ ++LAHNHPSG Sbjct: 134 DTKNQVILKKTVFIGSLNQSVAHPREIFHYAVRYCAARIVLAHNHPSG 181 >UniRef50_A9KL05 DNA repair protein RadC n=7 Tax=Clostridiales RepID=A9KL05_CLOPH Length = 232 Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 112/216 (51%), Gaps = 3/216 (1%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLE---NFGSLYGLLTSEYEQF 66 P EK + G +AL+D EL+A+ LRTG++ LA ++L + L G+ + F Sbjct: 16 PYEKCERDGAAALSDAELIAVILRTGSKETRSTELAAKILSYSNTYPGLRGISRMTQKDF 75 Query: 67 SGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVI 126 +HGIG K QL + EL+ R + P E+ + + E ++ Sbjct: 76 MSIHGIGRVKAIQLLCLTELSIRMAKATFADGIRYTDPSSVAEYYMQDMRSLKTEQSRLL 135 Query: 127 FLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKL 186 D++ +++ + GT+N + PRE+ A+K A +IL HNHPSG PSK D Sbjct: 136 MFDTKSKLLREEIISIGTVNASIMSPREVFLLAVKYEAVYIILLHNHPSGDPTPSKEDIA 195 Query: 187 ITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +T+R+ ++ + + + ++DHI+IG Y+S E+G I Sbjct: 196 VTKRMKEAGELLGVTLMDHIIIGDNRYISLKEQGII 231 >UniRef50_C2MB02 DNA repair protein RadC n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MB02_9PORP Length = 267 Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 76/243 (31%), Positives = 122/243 (50%), Gaps = 21/243 (8%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYG-LL 59 +K S+ PREK+L+ G L+D ELLA+F+ +GT L LAK+++ + G LL Sbjct: 22 IKQWSEEDRPREKLLRLGARHLSDAELLAIFINSGTEKDSALDLAKQIMTGLDNDLGQLL 81 Query: 60 TSEYEQFSGVH---------GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREF 110 ++ +G G+G A+ + EL RR + +P+ Sbjct: 82 EIDHAYLTGCEPGEKKKRFAGLGDARACTILAAIELGRRLRDTPPPRRTPITCSLDAYRV 141 Query: 111 LQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILA 170 L+ L + E ++LD+ RVI + SG ++H R I+ AI ASA+ILA Sbjct: 142 LRRHLESLDHEELRCLYLDASGRVIKDELVSSGGVSHAVADLRLILAPAITHYASAIILA 201 Query: 171 HNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGR--------GE---YVSFAER 219 HNHP+G +PS D +T+R+ + ++R+ DH+++GR GE Y+SFA+ Sbjct: 202 HNHPTGHLQPSAEDMDLTKRVKQVASVCNIRLNDHLILGRYHASVTSDGERSHYLSFADN 261 Query: 220 GWI 222 G + Sbjct: 262 GLL 264 >UniRef50_Q5FNC4 DNA repair protein RadC n=1 Tax=Gluconobacter oxydans RepID=Q5FNC4_GLUOX Length = 216 Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 64/197 (32%), Positives = 108/197 (54%), Gaps = 3/197 (1%) Query: 22 LTDVELLALF--LRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQ 79 L D LL L L TG R + L+ + FGSL +L++ + + +G+ Sbjct: 15 LDDATLLHLLTVLFTG-RETGSVALSHNLFARFGSLAAVLSATDRELESISDMGMHMLPM 73 Query: 80 LKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRR 139 ++ + E A RY R+ E L + + ++L ++L E E F ++FL+ ++ +I Sbjct: 74 IRVLQEAALRYNRARLPPEDVLDNEQKLLDYLTARLARENIEQFRILFLNEKNSLIADEA 133 Query: 140 LFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMD 199 GT+NH V+PRE+ R A++I A+AL+L HNHPSG PS+AD +T ++ + + + Sbjct: 134 QARGTVNHTPVYPREVARRAVEIGATALVLVHNHPSGDPTPSEADLQMTMQVQAALEVVG 193 Query: 200 LRVLDHIVIGRGEYVSF 216 + + DH +IG G + SF Sbjct: 194 VTIADHFIIGNGRHTSF 210 >UniRef50_A7VWV8 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VWV8_9CLOT Length = 251 Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 67/208 (32%), Positives = 111/208 (53%), Gaps = 2/208 (0%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 REK ++ G+S+L E++ L L KD+ LA E+LE FGS LL + E+ Sbjct: 15 REKFIRHGLSSLEPHEVVELMLYAAVPRKDMNPLAHELLEGFGSFPALLDAPIEELMKYK 74 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 GIG +K + + R Y + + + S E + + S+ TG E ++ LD Sbjct: 75 GIGRGSAITIKLFSAIGRFY--IESKADKGPTSMEEVIDIILSKFTGRSNEAVVLTLLDG 132 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 + +V+ + GT N +V+ R I+ A +A+ ILAHNHPSG A PS+ D T R Sbjct: 133 KGKVLYCGVVTEGTANSCDVYLRRIVGLAASYDATQAILAHNHPSGFALPSRTDLQTTVR 192 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAE 218 + ++ +++ ++DH+++ G+YVS A+ Sbjct: 193 VKEALALVNVTLIDHMIVADGDYVSMAQ 220 >UniRef50_D1PFM8 DNA repair protein RadC n=1 Tax=Prevotella copri DSM 18205 RepID=D1PFM8_9BACT Length = 218 Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 107/216 (49%), Gaps = 11/216 (5%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTR-----GKDVLTLAKEMLENFGSLYGLLTSEYE 64 P+ K G+ LT VEL++L + TGT+ + + + +E L N + E Sbjct: 5 PQYKAYNNGLGNLTTVELISLVIGTGTQKNVEQARQIFNVMEESLRNIAK------ARVE 58 Query: 65 QFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFM 124 V GIG +K L+ EL +RY M E L S FL + E E Sbjct: 59 DLQVVQGIGDSKAIALQAAIELGKRYSLENMAERPDLGSSLAIYNFLYPHVKDLEVEECH 118 Query: 125 VIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKAD 184 ++ ++ R+I H + G + V R I+REA+ NA+ L +AHNHPS PSKAD Sbjct: 119 LLLMNQNFRLIKHVPMSHGGITETAVDVRRIMREAVLNNATILAIAHNHPSNSPHPSKAD 178 Query: 185 KLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 ++T+ + ++C M + +DH++I G Y S+ ++G Sbjct: 179 DMLTKSVKEACSIMRIFFMDHVIIADGCYFSYHDKG 214 >UniRef50_Q6TFX1 ORF25 n=3 Tax=Enterobacteriaceae RepID=Q6TFX1_ERWAM Length = 149 Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 53/118 (44%), Positives = 77/118 (65%) Query: 105 EMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINA 164 + R L+ +L E RE F FL+ + VI LF GT++ V VHPR +++ A+ NA Sbjct: 32 DAARSLLRFRLAAEPRESFCAFFLNCHNGVIAFEELFKGTISSVTVHPRIVLQRALHHNA 91 Query: 165 SALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +A++LAHNHPS PS+ADKLITER+ + +D++VLDH+++G + SFAE G I Sbjct: 92 AAVVLAHNHPSANTTPSQADKLITERLAQVLGMVDVKVLDHLIVGGSDIYSFAEHGLI 149 >UniRef50_B8KQ45 DNA repair protein RadC n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KQ45_9GAMM Length = 177 Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 82/127 (64%) Query: 94 RMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPR 153 R+ L SP R++ Q QL E E F +FL +QH I+ F G+++ V+PR Sbjct: 49 RLINSDALTSPVRVRQYCQLQLGHERDEHFACLFLTAQHHAISFEIQFRGSIDGAAVYPR 108 Query: 154 EIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEY 213 I+R +++NA+A+IL HNHPSG +EPS AD+ IT R+ ++ + +D+RV+DH+++ G+ Sbjct: 109 VIVRRCLELNAAAVILVHNHPSGVSEPSPADRQITVRLQRALELIDVRVVDHLIVSAGDA 168 Query: 214 VSFAERG 220 SFA+ G Sbjct: 169 TSFAQAG 175 >UniRef50_D2RM81 DNA repair protein RadC n=2 Tax=Acidaminococcus RepID=D2RM81_ACIFE Length = 220 Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 72/214 (33%), Positives = 113/214 (52%), Gaps = 1/214 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLL-TSEYEQFSG 68 PRE++L G ALT ELLA+ + TG + L +A+E+ + L T + + + Sbjct: 7 PRERLLAKGPEALTITELLAILIGTGRKDHSALDIARELTGDLLKDARLARTQDVRELTR 66 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 + GIG AK + EL RR R + PE + +L E E F+V+ L Sbjct: 67 ISGIGPAKATVILAALELGRRLAGAGTRPFRTIHCPEDGAMLVMPRLRYENHEHFLVVLL 126 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 +S+ +VI + G+LN VHPRE A+ +A+A++ HNHPSG PS+ D+ +T Sbjct: 127 NSKGKVIGIEPVSEGSLNASVVHPREAFAPALLHHAAAILAVHNHPSGDPTPSREDRELT 186 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + + + M + ++DH++IG G Y SF E G + Sbjct: 187 RTLWDTGKVMGIPLVDHLIIGDGVYYSFKEHGLL 220 >UniRef50_C0BG63 DNA repair protein RadC n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BG63_9BACT Length = 232 Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 66/212 (31%), Positives = 112/212 (52%), Gaps = 1/212 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGS-LYGLLTSEYEQFSG 68 PREK+ G S L++ EL A+ + G+ + + L K +L + + L E+ Sbjct: 19 PREKLKSQGASYLSNAELFAVLIGYGSSSESAVGLMKRILLSINNDLQKFDQLPIERLVE 78 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 GIG K +LK + EL++R+ + + + L S ++ E + L E F +++L Sbjct: 79 FKGIGEVKAIKLKAVVELSKRFQKQQPDKTTVLNSSKIVYESIYMDLDTLPHEEFWILYL 138 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 + +R++ RL G + V R + A ++ A+ LILAHNHPSG PS +D+ IT Sbjct: 139 NQSNRLLEKYRLSKGGITQTTVDLRLAFKRAFEVGATGLILAHNHPSGGLTPSSSDEQIT 198 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 + + +DLR+LDH+++ + Y SFA+ G Sbjct: 199 RKFKLAAASVDLRILDHLIVSKKGYFSFADEG 230 >UniRef50_C1A4H3 DNA repair protein RadC n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A4H3_GEMAT Length = 244 Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 80/214 (37%), Positives = 114/214 (53%), Gaps = 1/214 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTS-EYEQFSG 68 PRE++ G AL+ EL+A L +G +G + A+ + E G G L + + Sbjct: 31 PRERLRALGSQALSTTELIATLLGSGQQGTSAVACAQVVFEQCGGSLGRLAAMPLAALTR 90 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 + G+GVA+ A + EL RR PL P +L E F V L Sbjct: 91 IRGVGVARAAAVHAALELGRRMAGEAREAGLPLRGPRDVAAAFAPRLQDAPVEEFHVAIL 150 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 D+QHR+ + G LN VHPRE+ REAI A+A+IL HNHPSG PS D+ +T Sbjct: 151 DAQHRLERDVLITRGLLNSSLVHPREVFREAIAERAAAVILVHNHPSGDPTPSAEDRAVT 210 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 E+++ + + +D+ V DHI++GRG YVSFAE G + Sbjct: 211 EQLVAAGRLLDIPVHDHIIVGRGRYVSFAEAGLL 244 >UniRef50_B9QT39 DNA repair protein RadC n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QT39_9RHOB Length = 228 Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 66/201 (32%), Positives = 106/201 (52%) Query: 16 KFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVA 75 + G ALTD+E++ L L R + T+A+ +L F SL LL + + G+G Sbjct: 22 EVGPDALTDLEIITLLLVPLYRWEHAETIAQRLLSEFQSLPELLNAPRHRLLEFSGVGPV 81 Query: 76 KFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVI 135 L I + R + E L +++Q+ + E E F +FL+ +H VI Sbjct: 82 LADTLSAIRQCIVRSARAEITERRVLDCWSEVIDYIQATMGYLEIEQFRCLFLNKKHGVI 141 Query: 136 THRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSC 195 + GT++H V+PRE++R A+ + ASALIL HNHPSG PS+ D +T +++ Sbjct: 142 ADEVMQEGTVDHTPVYPRELMRRALILQASALILVHNHPSGDPTPSRPDIEMTAQLVDIA 201 Query: 196 QFMDLRVLDHIVIGRGEYVSF 216 + + + + DHI++ RG VSF Sbjct: 202 KPLGIEINDHIIVARGLAVSF 222 >UniRef50_B8KU95 DNA repair protein RadC n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KU95_9GAMM Length = 223 Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 63/179 (35%), Positives = 102/179 (56%) Query: 42 LTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPL 101 ++LA + EN L L+ S + GI A A+L EL + + + Sbjct: 43 VSLANALRENNDCLRSLMRRIIGGPSAIGGIDDAARARLIAALELGDLLAEAGLYQRDLI 102 Query: 102 LSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIK 161 S R FLQ +L + RE+F ++LDS++R+I LF+GT++ V PRE++R A+ Sbjct: 103 ASAVECRRFLQRRLGKQRREVFSALYLDSRNRLIVAEDLFAGTIDGAAVFPREVVRGALL 162 Query: 162 INASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 +A+++I+AHNHPSG PS+ D+ +T R+ + +D+R+LDH ++G G+ VS A G Sbjct: 163 HDAASVIVAHNHPSGALAPSEQDRQLTRRLSSALSLVDIRLLDHFIVGFGDSVSLASLG 221 >UniRef50_C4GB45 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GB45_9FIRM Length = 241 Score = 112 bits (281), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 1/208 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLE-NFGSLYGLLTSEYEQFSG 68 P K+ + G +ALTD EL+A+ LR+GTR DVL +A+E+L SL L+ ++ Sbjct: 28 PDRKLDRCGCAALTDAELIAILLRSGTRDCDVLAMAEELLRLRQHSLADLVNISRDELML 87 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 + GIG K +L+ + EL+RR + R + L + + +L E+ E+ + + Sbjct: 88 IPGIGPVKARELQSVFELSRRIASNTRRRKLKLTETKSIAGYYMERLRHEDSELLVAAYF 147 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 + + ++ + G+ + + R+I A+ AS L+L HNHPSG PS+AD L T Sbjct: 148 NVRDELVFESVISLGSSDRTDFPIRKIFSLALTHQASQLVLLHNHPSGDPTPSQADYLAT 207 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSF 216 + + Q++++ + DHI+IG +Y SF Sbjct: 208 QEAKMAGQYLEIALRDHIIIGDHQYYSF 235 >UniRef50_D2NHT0 Putative phage DNA repair protein n=1 Tax=Escherichia coli SE15 RepID=D2NHT0_ECOLX Length = 156 Score = 112 bits (280), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 57/138 (41%), Positives = 88/138 (63%), Gaps = 4/138 (2%) Query: 85 ELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGT 144 ++ RYY ++ L SP+ R + +L E E F +I LD+Q++++ LF GT Sbjct: 23 DIISRYYQRGVQ----LCSPDDVRRCVMVELAPLEHEEFGIILLDNQNQLLHREILFRGT 78 Query: 145 LNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLD 204 LN V VHPRE+I+ +K NA+A+IL HNHPSG EPS+ D +T+++ + + +D+R+LD Sbjct: 79 LNSVSVHPREVIKRVLKHNAAAVILVHNHPSGEPEPSRCDIQLTKKLQELLEILDVRLLD 138 Query: 205 HIVIGRGEYVSFAERGWI 222 H ++ E VS AERG + Sbjct: 139 HFIVAGTETVSMAERGLV 156 >UniRef50_D1BNF1 DNA repair protein RadC n=3 Tax=Veillonella RepID=D1BNF1_VEIPT Length = 232 Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 75/213 (35%), Positives = 119/213 (55%), Gaps = 2/213 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGS-LYGLLTSEYEQFSG 68 PREK L G S + ELLA+ LRTG +G+ ++LA +++++F +YGL + Sbjct: 17 PREKFLALGPSHMAMEELLAILLRTGVKGQSAISLASDIVQSFDDGVYGLNRMTVDNLIK 76 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLS-PEMTREFLQSQLTGEEREIFMVIF 127 + GIG K L E+ RR ++++E S P + +++ +L E+ E Sbjct: 77 IKGIGRDKAVTLCAALEMGRRLGELKIKETYEDFSQPFVIAQYVMERLRHEDVEHVWAAM 136 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 L S++++I + +G L V R + ++AI NA+A+IL HNHPSG + PS D + Sbjct: 137 LTSRNKLIQLEHISNGGLVSSLVEQRAVFKKAIACNAAAIILIHNHPSGDSRPSDEDIRL 196 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 T+ + + QFM + VLDHIVIG E+ S +E G Sbjct: 197 TKMFVSAGQFMGIPVLDHIVIGDNEFTSLSEIG 229 >UniRef50_D2EK65 DNA repair protein n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EK65_PEDAC Length = 225 Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 110/212 (51%), Gaps = 8/212 (3%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSL--YGLLTSEYEQ--F 66 REK+ K G LT+ ELL FL + + V L++E + G + Y LLT Q F Sbjct: 11 REKLTKIGAENLTNAELLRAFLSCCGQEQAVNRLSQEFWDQVGDIVGYSLLTQRERQTIF 70 Query: 67 SGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVI 126 S + +A L+ EL RR + +L + ++ +E +++ Sbjct: 71 SQLPAESLA----LEAAIELGRRVQRQPIHLLGKVLGSAQIGNLMVARFQKNPQEHLVLL 126 Query: 127 FLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKL 186 LD+++++ R +F G LN EVHPREI+ E ++ +++ IL HNHPSG EPS D Sbjct: 127 CLDTKNQIKQERVIFKGGLNSAEVHPREIMAEVLRYSSNGFILVHNHPSGNVEPSMNDVA 186 Query: 187 ITERIIKSCQFMDLRVLDHIVIGRGEYVSFAE 218 T+++ K M +R++DH+++G Y S AE Sbjct: 187 FTKKMKKIGDLMGIRLIDHLIVGDQTYWSAAE 218 >UniRef50_C9RLS9 DNA repair protein RadC n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLS9_FIBSS Length = 233 Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 114/212 (53%), Gaps = 9/212 (4%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 LMPREK+ G+S+L++ ELLAL L +G+ V LA+ + E + + T + Sbjct: 16 LMPREKLEFSGVSSLSNEELLALILGSGSHECSVFELARRLSEFLSTETSVPT--LARLK 73 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPE--MTREFLQSQLTGEEREIFMV 125 + G+G K AQ+ EL+ R+ + + P+ PE ++R + + E +E +V Sbjct: 74 SIRGLGKVKAAQILACLELSGRF--ILSDKAIPVAVPEDVLSR---VAYMKYESQEHLVV 128 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 I L+S + +I L +G +N VHPRE AI+ A ++I HNHPSG EPS D Sbjct: 129 ISLNSANYIIRVHELTTGLVNQTPVHPREAFALAIEDRAVSVIFVHNHPSGSLEPSPEDM 188 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFA 217 IT + S + + + VLDHI+IG+ + S Sbjct: 189 SITRVLCASGKILQIPVLDHIIIGKSGFTSLC 220 >UniRef50_C2E2B4 DNA repair protein RadC n=8 Tax=Lactobacillus jensenii RepID=C2E2B4_9LACO Length = 207 Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 64/180 (35%), Positives = 95/180 (52%), Gaps = 11/180 (6%) Query: 43 TLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLL 102 L + LENFG +Y LTS L L +R VR R+ + Sbjct: 39 VLLNKKLENFGQIYDYLTS-----------CQIDDELLSRTITLLKRLKAVRTRKLIQFV 87 Query: 103 SPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKI 162 S ++L + G E+E +VI+LD++++V+ R LF GT+N VHPR+I R A+ Sbjct: 88 SSHEVGKYLIDRFLGVEQEQLVVIYLDNKNKVLGERLLFQGTVNRSVVHPRDIFRWAVFY 147 Query: 163 NASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 N+ +++AHNHPSG A PS+ D T++I K+ M + LDHI++ Y+SF E I Sbjct: 148 NSVGILIAHNHPSGDANPSQKDIEFTKQINKASDLMGINFLDHIIVADRSYLSFKEEQLI 207 >UniRef50_C5SK46 DNA repair protein RadC n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SK46_9CAUL Length = 244 Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 70/214 (32%), Positives = 116/214 (54%), Gaps = 9/214 (4%) Query: 18 GISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYE---QFSGVHGIG- 73 G S L D E+L L L +DV LAK +L FGSL +L++ E Q S + G Sbjct: 31 GTSVLPDYEVLELILFRSIPQRDVKPLAKALLSRFGSLSAVLSAPLEDMLQVSALDNKGR 90 Query: 74 ----VAKFA-QLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 A L+ + E RR ++ + + S + +L+ L E RE F ++FL Sbjct: 91 SLKMTPDIALDLQLMFEATRRLMAEPLKRSTVISSWQALLSYLRVTLAHEPREQFRLLFL 150 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 D ++++I + GT++H +PREI+R A++++AS++IL HNHPSG PS+ D +T Sbjct: 151 DKKNQLIADEIMNYGTVDHAPAYPREIMRRALELSASSVILVHNHPSGDPMPSQGDIDMT 210 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + I + + + + + DH+++GR +S + G I Sbjct: 211 KANIAAGKPLKIAIHDHLIVGREGVLSMKQVGAI 244 >UniRef50_B8H0Z9 DNA repair protein radC n=1 Tax=Caulobacter crescentus NA1000 RepID=B8H0Z9_CAUCN Length = 221 Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 66/172 (38%), Positives = 101/172 (58%), Gaps = 2/172 (1%) Query: 11 REKMLKFGISALTDVELLALFL-RTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 RE+ K G AL D EL+ LFL RT RG DV LAK +L FGSL G+L + E+ V Sbjct: 46 RERAAKGGFVALPDYELIELFLFRTFPRG-DVKPLAKALLTRFGSLDGVLGATVEELRTV 104 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+G A LK + E+A R ++ + + S +++ L E RE F V+FLD Sbjct: 105 QGVGEAAAMDLKLLHEVALRAGRDKIAKRPVISSWSALLAYVRVALANESREQFRVLFLD 164 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPS 181 ++++I L GT++H V+PRE++R A+++++S +I+ HNHP+ P+ Sbjct: 165 KKNQLIADEVLNRGTVDHAPVYPREVMRRALELSSSNIIILHNHPTCPLSPT 216 >UniRef50_B8J197 DNA repair protein RadC n=4 Tax=Desulfovibrio RepID=B8J197_DESDA Length = 229 Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 60/199 (30%), Positives = 97/199 (48%) Query: 20 SALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQ 79 + + D E+L L L KD LAKE+L FG + G++ + ++ V G G Sbjct: 27 AGMADYEVLELLLGYSLTRKDTKPLAKELLRRFGGIRGVMDARPDELLAVPGFGPGLMTF 86 Query: 80 LKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRR 139 + E RY + +R+ L +P+ QS+L G E + +D ++R+ R Sbjct: 87 FTALRETYSRYTDSAVRKREVLATPQAVARMAQSRLAGCPHEECWLALVDQRNRLTAWER 146 Query: 140 LFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMD 199 L G + V V PR++ A+ AS +I+ HNHP G PS+ADK T + + + Sbjct: 147 LRQGGVAEVPVQPRDVFEAALLRKASGIIVVHNHPGGNPAPSEADKTFTAELQRLAPQLG 206 Query: 200 LRVLDHIVIGRGEYVSFAE 218 LR LDH+++ G+ S + Sbjct: 207 LRFLDHVIVTEGDCYSITQ 225 >UniRef50_Q1WT78 DNA repair protein n=3 Tax=Lactobacillus RepID=Q1WT78_LACS1 Length = 225 Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 125/226 (55%), Gaps = 9/226 (3%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 + NN +K+++FG LT+ ELL L T K T AK ++++F + L Sbjct: 3 LTNNYSEKYITDKIIRFGAETLTNKELLQFILTT----KVSQTSAKNVIKDFFDEHQRL- 57 Query: 61 SEYEQFS--GVHGI--GVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLT 116 +E + FS G+ + K A ++ + E + RY + S M ++ ++ Sbjct: 58 NELQFFSDEGLKNLCKDDEKVAIIRALREFSERYKEKEGLVLGQIFSSCMFGNYMIDKIG 117 Query: 117 GEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSG 176 ++E+ + + LD++++V++ + +F GTLN VHPREI + A+ + + +++AHNHPSG Sbjct: 118 DSKQELLVCVCLDTKNQVLSEKVIFKGTLNSATVHPREIFKHALNFSCARILVAHNHPSG 177 Query: 177 CAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 EPS+ D +T+R+I + + + + ++DH+++G Y+S AE + Sbjct: 178 NVEPSENDIQLTKRLINAGKMIGIELIDHVIVGSEVYLSLAEEKIV 223 >UniRef50_A6GTQ1 DNA repair protein RadC (Fragment) n=1 Tax=Limnobacter sp. MED105 RepID=A6GTQ1_9BURK Length = 149 Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 59/138 (42%), Positives = 90/138 (65%), Gaps = 2/138 (1%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PRE+++K G AL+D ELLA+FLRTG GK + LA+EM+ FG L L ++ V Sbjct: 12 PRERLIKQGAQALSDAELLAIFLRTGLPGKSAVDLAREMISQFGGLQNLNRVSLAEWIQV 71 Query: 70 HGIGVAKFAQLKGIAELARRY--YNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 G+G AK+AQL+ E+A+R + ++ E+ L SP++ +F+++Q+ E E F+VI Sbjct: 72 RGLGEAKYAQLRACLEMAKRCLSHELQEAEQGLLASPDLFEQFVRAQIGLSEVENFLVIA 131 Query: 128 LDSQHRVITHRRLFSGTL 145 LDSQ +V+ H+ L SGT+ Sbjct: 132 LDSQLKVLDHKILSSGTV 149 >UniRef50_B0T9R6 DNA repair protein RadC n=4 Tax=Alphaproteobacteria RepID=B0T9R6_CAUSK Length = 253 Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 116/206 (56%), Gaps = 5/206 (2%) Query: 18 GISALTDVELLALFL-RTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAK 76 G+++L+D+E L L L R+ G +A +L FG L +LT++ S V Sbjct: 52 GLASLSDIEALELLLSRSLANGARATAVA--LLARFGCLRRVLTADLAALSTFVDTRVGI 109 Query: 77 FAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVIT 136 QL I + ARR + + S ++L+ + ERE F V+FLD ++++I Sbjct: 110 DLQL--IYDAARRLAAAELPGRCVVSSWTALIDYLKLTMAHCEREAFRVLFLDKKNQLIA 167 Query: 137 HRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQ 196 L GT++H V+PRE++R A++++ASA+IL HNHPSG PS AD +T++++ + + Sbjct: 168 DEILNHGTVDHAPVYPREVVRRALEVSASAVILVHNHPSGDQTPSSADIEMTKKVVDAAR 227 Query: 197 FMDLRVLDHIVIGRGEYVSFAERGWI 222 + + V DH+++GR E SF G I Sbjct: 228 TLGIAVHDHVIVGRAEVASFKALGLI 253 >UniRef50_B2KEG6 DNA repair protein RadC n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KEG6_ELUMP Length = 228 Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 109/212 (51%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 + K K G+ + E L L L KD +A E+++ FGSL G+L + ++ V Sbjct: 17 KNKFAKNGLDGFMEHETLELLLTYSIPRKDTKPIAWELIKKFGSLSGVLDASPQELMEVK 76 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+G LK + + ++Y ++++ + +PE + ++ L + E+F VI+L Sbjct: 77 GVGKETALFLKVVRGVYKKYAFSKLKKADIIRTPEDVANYCRASLAEHKDEVFEVIYLTV 136 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++ VI L G ++ + PR+++ A+K A ++L HNHPSG PS D T+ Sbjct: 137 RNTVIGTEVLSVGAIDRASISPRKVVEGALKAKAVGIVLVHNHPSGDPSPSMEDISFTKE 196 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + ++ + + + V DHI++ RG Y S + I Sbjct: 197 VAQAARILGIMVHDHIIVVRGGYYSMRAKSQI 228 >UniRef50_Q2IG79 DNA repair protein RadC n=8 Tax=Anaeromyxobacter RepID=Q2IG79_ANADE Length = 235 Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 72/211 (34%), Positives = 104/211 (49%), Gaps = 2/211 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PRE++L G AL+D ELLAL L TGT A ++E L L + + + Sbjct: 23 PRERLLAAGPRALSDAELLALVLGTGTGRVSARAAALSLVEAL-PLAELAWAPPDALASW 81 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 GIGVA+ A L EL RR R L P E L+ ERE F V+ LD Sbjct: 82 PGIGVARAAALAAAFELGRRGAWSPPRRGERCLDPRTVHELLR-HAAHAEREGFHVVLLD 140 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 + R++ ++ G+L+ V PR+ +R A++ A ++ HNHPSG PS D +T Sbjct: 141 VRGRLLRAVQVAEGSLSQCPVSPRDALRPAVREGAHGVVFVHNHPSGDPTPSPDDVDLTA 200 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 R+ + + + DH+++ G Y SF E G Sbjct: 201 RLRAAADLVGVLARDHVIVAAGGYYSFVEAG 231 >UniRef50_D1Y6L3 DNA repair protein RadC n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y6L3_9BACT Length = 239 Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 104/209 (49%), Gaps = 11/209 (5%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGL-------LTSE 62 PRE+++ G AL ELLA+ TG G +V+ +++E+L +GSL L L Sbjct: 11 PRERLVTRGPEALKTEELLAILFGTGREGCNVIEMSRELLNKYGSLKNLSRAHALELAGR 70 Query: 63 YEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREI 122 + GV GIG+AK L EL RR R +S L + +F QL+ +ERE Sbjct: 71 NRPYDGVKGIGLAKAVTLLAALELGRRATGEEERRDS--LKSRL--DFWTMQLSADEREF 126 Query: 123 FMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSK 182 + I+LD + I RL G ++ + ++R A+++N +AL L HNHP G PS Sbjct: 127 IIAIYLDRKDVPIADERLSYGGVDGAMLDAPYLMRRAVRLNCAALALVHNHPDGDLTPSD 186 Query: 183 ADKLITERIIKSCQFMDLRVLDHIVIGRG 211 D ++ + + Q + + H + G G Sbjct: 187 DDLFLSRSVARMLQVLQIGYYGHYIAGGG 215 >UniRef50_C1QC41 DNA repair protein n=2 Tax=Brachyspira RepID=C1QC41_9SPIR Length = 227 Score = 109 bits (272), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 112/207 (54%), Gaps = 1/207 (0%) Query: 15 LKFGISALTD-VELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIG 73 L+F + L D ++LA + G + T+ ++ +F +LY ++ + ++ V G+ Sbjct: 10 LQFSNADLVDEKQILASIISNGISLERANTIVDKLYYSFYNLYNIVNASDKELLRVKGLN 69 Query: 74 VAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHR 133 K +K I + Y ++ ++P +L +L + E F ++ LD + Sbjct: 70 DKKIKLIKSIPSILEYYLLSSLKADTPNFKKRDLINYLIIKLGKLKFETFSIVCLDVNKK 129 Query: 134 VITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIK 193 I+ +F GT++ ++PR+++ +++ + +S +I++HNHPSG A+PSK D IT + K Sbjct: 130 FISMEHIFRGTIDSATIYPRDLVEKSLSLGSSYVIVSHNHPSGIAKPSKEDINITNVLYK 189 Query: 194 SCQFMDLRVLDHIVIGRGEYVSFAERG 220 + + +D+++LDHI+I Y SF E G Sbjct: 190 AFKMVDIKMLDHIIIAANSYYSFREDG 216 >UniRef50_Q1MS20 DNA repair proteins n=3 Tax=Desulfovibrionaceae RepID=Q1MS20_LAWIP Length = 226 Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 104/201 (51%) Query: 20 SALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQ 79 S + + ELL LFL KD LAK++L+ FGS+ G L + + + G A A Sbjct: 24 SEMAEYELLELFLGYVHLRKDTKPLAKKLLQQFGSIRGALDAFPGELETIPQFGEALSAF 83 Query: 80 LKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRR 139 K I E+ RY +RE+ L +P++ E +++ TG E + +D+Q+R+I+ R Sbjct: 84 WKLIREIFARYAETPVREKIQLCTPKIVAEIAKARFTGCPHEEVWIATVDTQNRLISWER 143 Query: 140 LFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMD 199 L GT+ ++PR+ I +K AS IL HNHP G + S D IT + Q ++ Sbjct: 144 LSKGTIGSSPLYPRDTIEIVLKRKASGFILVHNHPGGSSNASSFDIEITRHLEHIAQSIN 203 Query: 200 LRVLDHIVIGRGEYVSFAERG 220 LR++DHI++ S G Sbjct: 204 LRLIDHIIVTEKNCYSIRNDG 224 >UniRef50_C0GMV6 DNA repair protein RadC n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GMV6_9DELT Length = 226 Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 104/211 (49%) Query: 12 EKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHG 71 +K L S+L D E+L L L KD LAK +L + + LL + + G Sbjct: 16 KKRLDNDPSSLQDYEILELVLGYALPRKDTKPLAKALLNRYPTFKDLLAARPGDLQAIDG 75 Query: 72 IGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQ 131 IG + E R + S L SPE +S+L + E F I +D++ Sbjct: 76 IGPGIITFFRLWGEFWARTDRSGLSTRSTLDSPEKVARLARSRLQFKSIEEFWAIMVDNK 135 Query: 132 HRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERI 191 +R+I ++ GT++ V PREI+ A++ AS +IL HNHP G PS D+ +T +I Sbjct: 136 NRLIDFEKMSRGTVDQAPVFPREILTVALEKRASGVILLHNHPGGDPHPSFQDRELTRKI 195 Query: 192 IKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + + +R+LDH++I + SF E G++ Sbjct: 196 REVSTALGVRLLDHVIISEDSFFSFQEHGFL 226 >UniRef50_A9I305 DNA repair protein radC homolog n=3 Tax=Proteobacteria RepID=A9I305_BORPD Length = 177 Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 45/120 (37%), Positives = 80/120 (66%) Query: 103 SPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKI 162 +P + + Q++L+G E+ V++L+SQ +VI + + GTL V+PREI++ A+++ Sbjct: 58 NPNAVKHYFQAKLSGMGHEVAAVLYLNSQFKVIRYMEMSHGTLTQASVYPREIVKTALRL 117 Query: 163 NASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +A+A+I++HNHPSG EPS+AD +T + + +D+R++DHI++ S AERG + Sbjct: 118 DAAAIIMSHNHPSGIPEPSEADLALTRHLKHALALVDVRLVDHIIVTGQNTTSLAERGQV 177 >UniRef50_Q02HM7 Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa UCBPP-PA14 RepID=Q02HM7_PSEAB Length = 202 Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 55/136 (40%), Positives = 83/136 (61%), Gaps = 9/136 (6%) Query: 81 KGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRL 140 + IA L RR + R LLSP R++L+ +L G+ E+F +FLD+Q R L Sbjct: 70 RAIAVLERRMF----RRGQELLSPRGLRQYLRLRLVGKSEEVFAAVFLDAQWRA-----L 120 Query: 141 FSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDL 200 F GT+N ++ R +++ A++ NA +++AHNHPSG A PS+AD T ++ + +D+ Sbjct: 121 FRGTVNAAPMYARVVVKRALRHNAVGVVVAHNHPSGLATPSQADIAATRQLKAALNLVDI 180 Query: 201 RVLDHIVIGRGEYVSF 216 +LDH VIGRGE SF Sbjct: 181 ELLDHFVIGRGEPFSF 196 >UniRef50_Q2SAN5 DNA repair protein n=2 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SAN5_HAHCH Length = 183 Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 50/135 (37%), Positives = 87/135 (64%), Gaps = 4/135 (2%) Query: 86 LARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTL 145 LA+R+ R + P +E+L L E RE F+ +FLD+Q+R+I + LF G + Sbjct: 39 LAQRF----KRHSCHMDDPGKVKEYLMMHLAPEPRETFVGLFLDTQNRLIAYEVLFRGAI 94 Query: 146 NHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDH 205 + ++PRE+++ A++ NA+ +I+AHNHPSG +PS D+LIT R++++ +++ ++DH Sbjct: 95 DEAHIYPREVVKAALRHNAAKVIVAHNHPSGDPKPSVNDQLITYRLLQALMLVEIPLIDH 154 Query: 206 IVIGRGEYVSFAERG 220 V+G + VS A +G Sbjct: 155 FVVGGDQVVSMAAQG 169 >UniRef50_D1W0Q6 Putative DNA repair protein RadC n=2 Tax=Prevotella RepID=D1W0Q6_9BACT Length = 259 Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 114/214 (53%), Gaps = 1/214 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEY-EQFSG 68 PREKM + G SAL+ ELLA+ + +G+ + + L K +L + + L + ++ + Sbjct: 45 PREKMERLGASALSPAELLAILIGSGSVDESAVDLMKRLLNDCNNNLNTLGKQTIQELTN 104 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 GIG AK + EL +R + E + L S E++ ++ + E ++ + Sbjct: 105 YKGIGPAKAITILAACELGKRRAMEKAEERADLSSALAIYEYMHPRMQDLDVEEAWILLM 164 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 + ++++I R+ G ++ V R I+REA+ NA+ L L HNHPS A PS D +T Sbjct: 165 NQRYKLIKAMRISHGGISETAVDVRVIMREAVLSNATVLALCHNHPSNQAFPSTEDDRLT 224 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +RI ++ Q M + LDHI++ G Y S+ E G + Sbjct: 225 KRIHEASQLMRIYFLDHIIVTDGRYYSYREEGRV 258 >UniRef50_D1AWS8 DNA repair protein RadC n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AWS8_STRM9 Length = 211 Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 7/203 (3%) Query: 24 DVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGI 83 D ELL + K A E+++ +G + +L E F + + + +K + Sbjct: 12 DFELLLNLIELVENRKIAKLQASEIIKKYGGISNILR---EDFKVIENMNILSKKTMKIL 68 Query: 84 AELARRY----YNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRR 139 ++ Y +N EE + E ++L+ Q ERE+F V++ ++++ +I Sbjct: 69 ENVSLIYNHILFNECFGEEKKISCFEDLVKYLKFQYVDMEREVFKVLYFNTKNVLIKDEN 128 Query: 140 LFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMD 199 +F GT++ V+ REI++ +K NA ++I+ HNHPSG EPS D+ +T++II + +D Sbjct: 129 IFYGTIDKSVVYVREIVKNILKYNAKSIIIVHNHPSGNLEPSNDDRCLTKKIIDVLKLID 188 Query: 200 LRVLDHIVIGRGEYVSFAERGWI 222 +R+ DHI+I Y SF E G I Sbjct: 189 VRLSDHIIISNKGYYSFLENGQI 211 >UniRef50_A0LNF4 DNA repair protein RadC n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LNF4_SYNFM Length = 225 Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 109/212 (51%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 RE+ + G+S D E+L L L +DV LAK++L FGSL +L + V Sbjct: 13 RERFGRSGLSGFHDHEVLELLLSYAIPRRDVKPLAKDLLSRFGSLAAVLDAPPAVLRNVP 72 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 GIG A L + EL RY R E S +L + L E E F ++ L+S Sbjct: 73 GIGPNAAALLSILPELFTRYRESRWHREETFNSTRGAVSYLSALLCTERSEKFCILALNS 132 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 + +I + G++N V PR ++ ++K A+A+ILAHNHP G PS AD+ +T R Sbjct: 133 TNDLIQMEEIQRGSVNRTAVFPRLVVEASLKHRATAVILAHNHPGGDPNPSAADQQLTRR 192 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + + +D+ V DHI+I Y SFAE G + Sbjct: 193 LKRILNDLDIIVHDHIIIAGPRYYSFAEHGGL 224 >UniRef50_C0R2T1 DNA repair protein RadC n=7 Tax=Wolbachia RepID=C0R2T1_WOLWR Length = 224 Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 58/208 (27%), Positives = 115/208 (55%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 REK++ +L D E+L L + DV +AK ++ENFGSL + ++ E V Sbjct: 13 REKIILDNGQSLLDYEVLEHILYSAYSRIDVKPIAKSLIENFGSLNKVFNADLEALQNVD 72 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+ A + + + + R +++ + + E ++L+ + +E F VI+++ Sbjct: 73 GVSNAAISAIFCVKQAFVRSAREEIKDLPIIDNWEKLLDYLRISIGSLNKENFRVIYMNK 132 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++R+I GT++ ++ REII+ A+ I +++++++HNHPS +PS +D +T + Sbjct: 133 KYRLIAEDLQNIGTVDQTPLYVREIIKRALLIGSTSIVISHNHPSRDTQPSNSDISLTRQ 192 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAE 218 + ++CQ + + ++DHI+I Y SF E Sbjct: 193 LAEACQSIGIELIDHIIITFSSYFSFKE 220 >UniRef50_Q03EP2 DNA repair protein n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03EP2_PEDPA Length = 219 Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 68/214 (31%), Positives = 114/214 (53%), Gaps = 4/214 (1%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSL--YGLLTSEYEQFSG 68 + K+ K G L++ EL+ FL + + + + L + G + YGLL S+ E+ Sbjct: 8 KAKLKKVGAENLSNEELVRAFLDSFGQSQKINQLTNHFWDTIGDIAGYGLL-SQNEKRKI 66 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 I A A GI EL RR + +L + + S+ E +E +V+ L Sbjct: 67 FKNIPDATVALEAGI-ELGRRIQKQPIHLLGKVLGSAQLGQMMVSRFQKEPQEHLLVLCL 125 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 D+++++ +F G LN EVHPREI+ E ++++A++ +L HNHPSG EPS D T Sbjct: 126 DTKNQIKREIVVFKGGLNSAEVHPREIMVEVLRVSANSFVLIHNHPSGNIEPSTNDLAFT 185 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +++ K M +R++DH+++G Y S AE+ +I Sbjct: 186 KKMKKVGDLMGIRLIDHLIVGDQSYWSAAEKRFI 219 >UniRef50_Q48AG2 DNA repair protein RadC, n-terminal n=1 Tax=Colwellia psychrerythraea 34H RepID=Q48AG2_COLP3 Length = 164 Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 57/130 (43%), Positives = 90/130 (69%), Gaps = 1/130 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +KN ++ PREK++ G S+L+D ELLA+FLRTG RG +V+ LA+++L++FGSL + Sbjct: 22 LKNWPEMERPREKLVSLGSSSLSDAELLAIFLRTGVRGCNVVDLARQLLKSFGSLGAIFA 81 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMRE-ESPLLSPEMTREFLQSQLTGEE 119 + E F HG+G+AK+ QL+ E+++RY +++ + L S + TR++L S+L E Sbjct: 82 ASQEDFCARHGLGMAKYVQLQACLEMSKRYLAENIKDIDCSLTSSQATRDYLLSELRLET 141 Query: 120 REIFMVIFLD 129 REIF V+FLD Sbjct: 142 REIFAVLFLD 151 >UniRef50_B0PEI5 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PEI5_9FIRM Length = 230 Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 108/212 (50%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 +E+ L+ G+ +L L L +D LA ++ FGSL + + +++ V Sbjct: 13 KERFLREGLDHFEPHTVLELLLFYAVPQRDTNELAHRLIARFGSLDAVFDAAFDELCAVE 72 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 GIG LK + +L RRY + E+ L S + +FL+ + G +E+ ++ L++ Sbjct: 73 GIGRNTATLLKLVPDLTRRYLDSADHEQVLLTSVQAIGDFLRPKFLGRTKEMVFLLCLNN 132 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 + + + GT++ ++ R I+ A++ A ++ILAHNHP G A PS AD TE Sbjct: 133 KGGLTYGDFIAEGTIDSAPMYSRTILEAAMRSRAVSVILAHNHPHGLAVPSNADLAATES 192 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + + +R+LDH + +Y+S + G+I Sbjct: 193 VCHALAAAKIRLLDHFIFAGQDYISLRDSGFI 224 >UniRef50_Q7UL21 DNA repair protein n=4 Tax=Bacteria RepID=Q7UL21_RHOBA Length = 319 Score = 105 bits (263), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 110/212 (51%), Gaps = 13/212 (6%) Query: 18 GISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLL----TSEYEQFSGVHGIG 73 G ++L++ +LLA+ +R G G+ T ++ +F + + SE + + Sbjct: 109 GAASLSNADLLAILIRVGVVGESATTGGTKLANHFDEVLDAIREQSVSELRHITK--AVT 166 Query: 74 VAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQ------SQLTGEE-REIFMVI 126 A + Q+ EL RR P++ T E + + L G+ +E F ++ Sbjct: 167 KASYCQIMAGIELGRRATEAARERPVPIVKITSTTEATEYCAQKFAYLAGDAVQEEFHIV 226 Query: 127 FLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKL 186 LD++H+ I R+ GTL+ VHPRE+ R AI+ A+A++L HNHPSG PS+ D Sbjct: 227 TLDTKHKPIRTHRITVGTLDSSLVHPREVFRPAIRDAAAAVLLVHNHPSGDPTPSREDHA 286 Query: 187 ITERIIKSCQFMDLRVLDHIVIGRGEYVSFAE 218 +TER+ ++ + + + VLDHIV+ + +S E Sbjct: 287 VTERLTEAGKLIGITVLDHIVVAKQRCLSLRE 318 >UniRef50_Q04B84 DNA repair protein n=2 Tax=Lactobacillus delbrueckii subsp. bulgaricus RepID=Q04B84_LACDB Length = 204 Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 49/125 (39%), Positives = 74/125 (59%) Query: 95 MREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPRE 154 MR S +L ++L G+++E F V++ D Q ++ + LF GTL+ VHPRE Sbjct: 77 MRRSSDWAGSSKIGNYLANKLLGQKQEQFWVLYFDQQQNLLGEKMLFQGTLDRSWVHPRE 136 Query: 155 IIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYV 214 I R A+ +++I+AHNHPSG PS D +T+ + K+ + M + LDH +IG GEY+ Sbjct: 137 IFRWAVVYGCASIIVAHNHPSGALTPSDNDLELTKGLKKASKIMKITFLDHFIIGGGEYL 196 Query: 215 SFAER 219 S ER Sbjct: 197 SLRER 201 >UniRef50_A8ZTW3 DNA repair protein RadC n=5 Tax=Bacteria RepID=A8ZTW3_DESOH Length = 223 Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 112/210 (53%), Gaps = 6/210 (2%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PREK+LK G + L+D ELLA+ L GT DV L++++++ LT++ V Sbjct: 17 PREKLLKQGAAFLSDQELLAILLSKGTAKDDVFALSRKIIKIIDEKGAALTAQ--DIMAV 74 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 GIG+AK A + E RR R++ + + L ++E F+ + ++ Sbjct: 75 DGIGMAKAAAICAAFEFVRR----RVKPQGLKIKFPADVLPLIHHYADRKQEHFLCVSIN 130 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 + V++ R + G +N +VHPRE+ + + ASA+I+AHNHP G PS+ D +T Sbjct: 131 GANEVMSVRVVSIGLINKTQVHPREVFADVLAERASAVIVAHNHPHGDLAPSREDIQVTR 190 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAER 219 ++ + Q + L LDHI+ Y SFAE+ Sbjct: 191 QLKDAAQTLGLTFLDHIIFNTTGYYSFAEQ 220 >UniRef50_B0MUL4 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MUL4_9BACT Length = 214 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 69/211 (32%), Positives = 114/211 (54%), Gaps = 5/211 (2%) Query: 13 KMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENF-GSLYGLLTSEYEQFSGVHG 71 K+L G+ LTD ELL L L G D LA +L +F G L L ++ + G Sbjct: 7 KLLSRGVETLTDQELLELLLDDG----DSERLAGALLSSFEGRLAALGYADIARLRMAAG 62 Query: 72 IGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQ 131 IG+ + A+++ EL RR R P+ S + LT + E ++L++ Sbjct: 63 IGLKRAARIQAAVELGRRVLAARELGPDPIGSSNDVVRIFRPLLTEMKHEECWCLYLNTG 122 Query: 132 HRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERI 191 +R++ +R+ G + V R +I+ A+++ A+ +IL HNHPSG A PS+ DK++T++I Sbjct: 123 NRIVERQRVSQGGVQATVVDHRLVIKRALELLATQIILVHNHPSGAALPSEQDKILTKKI 182 Query: 192 IKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++ D+R+LDH++I RG SF + G + Sbjct: 183 AEAAALFDIRLLDHLIIARGGEYSFRQSGLL 213 >UniRef50_Q47CZ3 DNA repair protein RadC n=2 Tax=Dechloromonas aromatica RCB RepID=Q47CZ3_DECAR Length = 193 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 64/156 (41%), Positives = 102/156 (65%), Gaps = 4/156 (2%) Query: 71 GIGVAKFAQLKGIAELARRYYNVRMRE---ESPLL-SPEMTREFLQSQLTGEEREIFMVI 126 G+G +L ++AR +RE +SP++ SP++ R++L+ G + E+F+VI Sbjct: 38 GMGNLPETELAHRLDVARELLLRDLREQMCDSPVMASPQVLRDWLRLHCAGLQHEVFLVI 97 Query: 127 FLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKL 186 +LD+ HR+I LF GTL V+PRE+++ A+ NA+AL LAHNHPSG AEPS+AD+L Sbjct: 98 YLDAHHRLIEAEELFRGTLTQTSVYPREVVKGALTRNAAALALAHNHPSGEAEPSRADEL 157 Query: 187 ITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +T+ + + +D+R++DH ++ + VSFAE G I Sbjct: 158 LTQTLKSALSLVDVRIIDHFIVAGDKVVSFAELGLI 193 >UniRef50_C9M9H6 DNA repair protein RadC n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9H6_9BACT Length = 229 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 75/222 (33%), Positives = 112/222 (50%), Gaps = 7/222 (3%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLL- 59 +K Q PRE++ + G S L+DVELLA+ +RTGT + VL LA +L FG L + Sbjct: 8 LKQLPQSSRPRERLCRLGASGLSDVELLAVLIRTGTAAQGVLELAGSLLAEFGGLRAMAQ 67 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 S E + G+G AK A L EL RR N +E P L + QL E Sbjct: 68 ASPSELVQSIGGMGEAKAAALLAAFELGRRSSN--EQEGLPPLKAWLAD--WACQLRPEA 123 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 RE + F D Q R++ RL G + + ++R A++++ + L HNHP +E Sbjct: 124 REFVVAGFFDDQDRLLGDERLSYGGPDGAALDMPYLLRRAVRLDCRGVALLHNHPDRVSE 183 Query: 180 PSKADKLITERIIKSCQFMDLRVLDH--IVIGRGEYVSFAER 219 PS D+ +T+ + + +++R + H IV GR VS + R Sbjct: 184 PSMEDRKLTDYLACRLELLNIRFIGHFLIVGGRVSVVSGSSR 225 >UniRef50_A9GNT0 DNA repair protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GNT0_SORC5 Length = 259 Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 1/214 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PRE+ L+ GI +L D +LLA+ L TG G V ++ +L F L GL + Sbjct: 31 PRERALEEGIWSLGDADLLAIVLGTGLVGTPVTLVSAALLSRFAGLEGLARLGPHALAEH 90 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+G+AK ++ EL RR + +R P+ + + +QL + E VI LD Sbjct: 91 PGLGLAKALRIAASLELGRRAFERSVRPRPPVRTSASIAAWCAAQLGPLDHEQMWVISLD 150 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 ++ + RR+ G L+ V R+I+R A+ ASAL+L HNHPSG + PS D +T Sbjct: 151 GRNGMRGARRVAQGGLHGCSVTARDILRAALSDAASALVLVHNHPSGDSAPSPEDVAMTN 210 Query: 190 RIIKSCQFMDLRVLDHIVIGR-GEYVSFAERGWI 222 + + + + + ++DH+++ G Y S + G I Sbjct: 211 AVAAAGEVIGVPLVDHVILAPDGHYSSLLDLGMI 244 >UniRef50_A0R7V6 DNA repair protein RadC n=5 Tax=Desulfuromonadales RepID=A0R7V6_PELPD Length = 168 Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 54/138 (39%), Positives = 83/138 (60%), Gaps = 7/138 (5%) Query: 89 RYYNVRMREESP------LLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFS 142 RY +RE++P SP+ E + L E +E F+ + LD ++R++ R+ Sbjct: 30 RYRKEAVREDAPEWVTTRFTSPKQVFELFK-DLIYETKEHFITLHLDGKNRIMCMDRVSI 88 Query: 143 GTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRV 202 G+LN VHPRE+ + A+ NA+A+I H HPSG PS D IT+R+ ++ + M +RV Sbjct: 89 GSLNQSIVHPREVFKTALLSNAAAIICVHQHPSGDPNPSSEDLSITKRLKEAGEIMGIRV 148 Query: 203 LDHIVIGRGEYVSFAERG 220 LDHIV+G +Y+SF E+G Sbjct: 149 LDHIVVGHEDYISFVEKG 166 >UniRef50_C6XNR3 DNA repair protein RadC n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNR3_HIRBI Length = 272 Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 104/187 (55%), Gaps = 6/187 (3%) Query: 39 KDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIG--VAKFAQLKGIAELARRYYNVRMR 96 +DV +AK +++ FG + G++ + ++ V GIG A + Q + V+ R Sbjct: 89 RDVKPVAKALIDKFGGISGVMAAPIKRLKEVDGIGETCATYIQATHLLNQRCSLEEVKAR 148 Query: 97 EESPLLSP-EMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREI 155 P++S ++ L E E F V+FLD ++++I R GT+NH V+PRE+ Sbjct: 149 ---PIISNWGALLSHVRIALQHETEEQFRVLFLDHKNQLIADERQSQGTINHAPVYPREL 205 Query: 156 IREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVS 215 + A++++ASALIL HNHPSG PS+AD +T I+ + + +++ + DH+++G+ S Sbjct: 206 AKRALELSASALILVHNHPSGDPTPSRADIDVTREIMDAFEPLEITIHDHLIVGKKGITS 265 Query: 216 FAERGWI 222 + I Sbjct: 266 LKAKNLI 272 >UniRef50_C6J5M2 DNA repair protein RadC n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J5M2_9BACL Length = 162 Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 48/120 (40%), Positives = 78/120 (65%) Query: 103 SPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKI 162 +P + + + L G ++E FM++ L++++R+++ + GTLN VHPRE+ + AI Sbjct: 43 TPADVFQAVATDLVGLDKEHFMILILNTKNRILSKEVISIGTLNSAIVHPREVFKPAIIK 102 Query: 163 NASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 A+++I HNHPSG PS DK +TER+I++ + + + VLDH+VIG YVS E+G I Sbjct: 103 GAASIICVHNHPSGDPAPSSEDKKLTERLIQAGEIIGIDVLDHVVIGTEGYVSLKEQGMI 162 >UniRef50_C7NDB9 DNA repair protein RadC n=4 Tax=Fusobacteriaceae RepID=C7NDB9_LEPBD Length = 240 Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 114/214 (53%), Gaps = 26/214 (12%) Query: 31 FLRTGTRG-----------------KDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIG 73 FL TGT+G K+ +AK +L+ +G LY +L E+ + Sbjct: 31 FLSTGTKGFLDYELLELLLTYTVIRKNCRGIAKNLLKKYGDLYTILQQSEEELQKNKYMT 90 Query: 74 VAKFAQLKGIAE-----LARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 LK ++E L ++ +N ++ + S +L+ L + E+F V+FL Sbjct: 91 ERTVVFLKLLSEIIENGLYKKIHNKKI----SITSNIKLLNYLKCSLLKRDIEVFKVLFL 146 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 ++Q+ ++ LF GT++ ++ RE+I++ ++ NA ++IL HNHP+G +PS +D L+T Sbjct: 147 NTQNELMKEEELFYGTIDRSTIYIRELIKKILEYNAKSVILVHNHPAGSLKPSDSDILLT 206 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +++ + + M++R+LDH++I Y SF E G + Sbjct: 207 KKVKEVFESMEIRLLDHLIISEQGYFSFLEGGIL 240 >UniRef50_C3WF45 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WF45_FUSMR Length = 154 Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 48/130 (36%), Positives = 83/130 (63%) Query: 93 VRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHP 152 ++ R+ + + + E EFL+ L+ E F ++FL++ +++I + LF GT++ V+P Sbjct: 25 IKRRDLTTIKNKENLLEFLKINLSPRNNEEFKILFLNNANKLIAEKTLFYGTIDKSAVYP 84 Query: 153 REIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGE 212 R ++ E ++ N++ +ILAHNHPSG PSK D +TE + + + +++ VLDH++IG E Sbjct: 85 RVVLEEVLRYNSAGVILAHNHPSGNLRPSKQDIQLTEALQELLEKINVMVLDHMIIGDDE 144 Query: 213 YVSFAERGWI 222 Y SF E G I Sbjct: 145 YFSFREEGLI 154 >UniRef50_A2SPN1 DNA repair protein RadC n=1 Tax=Methanocorpusculum labreanum Z RepID=A2SPN1_METLZ Length = 247 Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 110/209 (52%), Gaps = 4/209 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +KN + + PREK++ G +L EL+A + G G D + + K++ + S Sbjct: 31 LKNTADIDKPREKLIAKGPGSLELEELVAAIIGRGVPGCDAVQIGKKVAKILMSRT--YE 88 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 +E GV+G+G AK Q+ ELARR+ R + + E F+ Q + + Sbjct: 89 TEVNDLCGVNGMGEAKACQIIAALELARRFPPPVHRF-AVIHKAEDVLPFVH-QYRYDTQ 146 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E + + L H V+ R + G +N ++HPRE+ AI A+A+IL HNHPSG P Sbjct: 147 ENVISVTLSGAHEVLKVRLITKGLVNESQIHPREVFAGAILDRAAAMILIHNHPSGNLHP 206 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIG 209 SK D IT+ + + + + +++LDH++IG Sbjct: 207 SKQDLKITKEMQAAGELLGIKLLDHLIIG 235 >UniRef50_C7JGI7 DNA repair protein RadC n=8 Tax=Acetobacter pasteurianus RepID=C7JGI7_ACEP3 Length = 249 Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 3/210 (1%) Query: 16 KFGISALTDVELLA-LFLRTGTRGKDVLTLAKEMLENFGSLYGLLT--SEYEQFSGVHGI 72 + ++ TD+ LL L + R A+ +L +GS ++ S +E + + Sbjct: 40 ELSVAEETDLALLCRLIAQAQPRNAKAQEQARNLLHEYGSFSAVMAAISWHEPSKSIKAL 99 Query: 73 GVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQH 132 A L E R R+R L +L++ + E+RE V+FL+ +H Sbjct: 100 PEAVRVLLMLAREAGLRIQRARLRRSGILADSTQLYAYLRAVMGPEKREQVRVLFLNDKH 159 Query: 133 RVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERII 192 ++ + GT++H V+PREI+ A+++NA+ L+L HNHPSG PS D ++T +I Sbjct: 160 ELLADDVMGQGTVDHTPVYPREIVARALQLNATMLVLVHNHPSGDPTPSADDVVMTTQIC 219 Query: 193 KSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + + M++ V DHI++ + +S E G++ Sbjct: 220 GAAKIMNIHVWDHIIVAGEKLLSMREAGFL 249 >UniRef50_Q2GL92 DNA repair protein RadC n=12 Tax=Rickettsiales RepID=Q2GL92_ANAPZ Length = 232 Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 114/213 (53%), Gaps = 2/213 (0%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGK-DVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 R+K+L + D E+L L L RG+ D+ +AK ++E FG+L +L ++ + V Sbjct: 21 RQKILNGNGDGVFDYEVLELLL-CSVRGRVDLKPVAKRLMERFGNLSQVLYADINELRKV 79 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 +G + A L + E R + L ++L+ ++ E F+V++L+ Sbjct: 80 KDMGDSSVAMLVCVREALIRVMRGNITSCVMLDKWPKLIDYLKVKIGNSTIENFLVLYLN 139 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 ++ +I +GT++ ++ RE+IR+A+ A ++++HNHPSG +PSKAD +T Sbjct: 140 KRYSLIADEVQSTGTVDETPLYIREVIRKALLCGAVYIVISHNHPSGDPKPSKADINVTN 199 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++ +C MD+ ++DH+++ + SF G + Sbjct: 200 KLRIACNSMDIELVDHVIVTSKRHYSFKTHGLL 232 >UniRef50_C0R372 DNA repair protein RadC, putative n=11 Tax=Wolbachia RepID=C0R372_WOLWR Length = 218 Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 53/202 (26%), Positives = 105/202 (51%), Gaps = 2/202 (0%) Query: 21 ALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQL 80 AL D E++ FL +AK ++ + + +L E + + G+ + A + Sbjct: 19 ALLDREIMETFLSAVHESPQAQEIAKNLVNTYTGVGRILGREMDDLKVIEGVTDSAVAMI 78 Query: 81 KGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRL 140 + E R +++ E P++ + E+L + ERE +++L+ + ++I Sbjct: 79 MCVKETLERVLKEKLKSE-PIMDLQGIVEYLNVSIGHSERECVKILYLNKRRQLIGEES- 136 Query: 141 FSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDL 200 + G + V+ +EI R+A+ NA+++I++HNHP G EPS+ D+ +T+ + +C + + Sbjct: 137 YIGEMEKAPVYIKEITRKALMKNATSIIMSHNHPGGSLEPSEEDQAVTKSLAAACSTVSV 196 Query: 201 RVLDHIVIGRGEYVSFAERGWI 222 ++ DHI+I G Y SF E G + Sbjct: 197 KLFDHIIITSGGYFSFRENGLL 218 >UniRef50_A4J365 DNA repair protein RadC n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J365_DESRM Length = 231 Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 52/159 (32%), Positives = 92/159 (57%) Query: 64 EQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIF 123 E+ GIG + A+L L ++ + E + + PE ++++ ++E F Sbjct: 73 EELMTYPGIGPSMAARLMAAFALTKKLASAGASENTVIRCPEDIFYLMKNEAKLLDKEYF 132 Query: 124 MVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKA 183 + L++++ VI + GTLN VHPRE+ ++AI+ +A+A+IL HNHPSG PS+ Sbjct: 133 SALLLNTKNHVIGKETISIGTLNSSMVHPRELFKQAIRRSAAAVILVHNHPSGDPTPSRE 192 Query: 184 DKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 D +T+R+I++ + + + VLDHIV+G ++ S +G I Sbjct: 193 DISLTKRLIEAGEIIGIDVLDHIVLGFDKFTSLKSKGLI 231 >UniRef50_Q3A6E7 DNA repair protein, RadC-like n=3 Tax=Desulfuromonadales RepID=Q3A6E7_PELCD Length = 166 Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 49/120 (40%), Positives = 79/120 (65%), Gaps = 2/120 (1%) Query: 103 SPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKI 162 SP E L + L E +E FM + LD+++R++ R+ G+L+ VHPRE+ + A+ Sbjct: 49 SPRKVAEML-AFLKAESKEYFMALHLDNKNRLLCLDRVSVGSLSASIVHPREVFKSALLS 107 Query: 163 NASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +A+ L+L HNHPSG EPS D+ +T R++K+ + + + VLDHI++G G + SFAE+G + Sbjct: 108 SAAGLVLVHNHPSGQTEPSHEDEEVTTRLVKAGEMLGIHVLDHIILGDG-FFSFAEQGLL 166 >UniRef50_Q042N7 DNA repair protein n=7 Tax=Lactobacillus RepID=Q042N7_LACGA Length = 206 Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 65/226 (28%), Positives = 112/226 (49%), Gaps = 39/226 (17%) Query: 7 LLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQF 66 + M +E++L+ TDV+L+ R+ + KD++T F SL F Sbjct: 2 IFMKKEELLQ------TDVDLVKKLARS-LKEKDIIT--------FDSL----------F 36 Query: 67 SGVHGIGVAKFAQLKGIA-------ELA-------RRYYNVRMREESPLLSPEMTREFLQ 112 + +G+ F +L A E+A R V +E L S ++ Sbjct: 37 KKLEEVGINSFKELWQYAASPKCEDEIAVVLQLMLERVKGVNNKEIESLYSSSQVGCYIA 96 Query: 113 SQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHN 172 +L G +E I+LDS++++I + +F GT+N HPR+I R A+ N++A +AHN Sbjct: 97 DKLCGRPQEELYGIYLDSKNKIIAEKLIFQGTVNRAVAHPRDIFRWAVIYNSTAFFVAHN 156 Query: 173 HPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAE 218 HPSG +PS+ D T++++++ + M + LDH ++ Y+SF E Sbjct: 157 HPSGDEQPSQHDLRFTKKLVEASKCMGIDFLDHFIVTDNTYLSFRE 202 >UniRef50_C0R3D5 DNA repair protein RadC n=2 Tax=Wolbachia RepID=C0R3D5_WOLWR Length = 219 Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 113/202 (55%), Gaps = 3/202 (1%) Query: 21 ALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQL 80 +L D ELL L G++V AK+++E F SL ++ +++ + V G+ A + Sbjct: 21 SLLDHELLERTLSECEEGREV---AKKLIELFSSLGRVINADFHELKNVTGMNDGAIASI 77 Query: 81 KGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRL 140 + E+ R ++++ S L + E ++ ++ + +E VI+LD +I Sbjct: 78 FCLKEIFDRILKGKLKKLSILDNREELLKYFKTAIGQSRKESLRVIYLDRSGHLIYEYIQ 137 Query: 141 FSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDL 200 GT++ V ++ REII++ + I+AS++ ++HNHPSG EPSK D+ T + +C+ + + Sbjct: 138 DCGTIDRVPLYVREIIKQGLLIDASSIAISHNHPSGDTEPSKEDEDNTLTLAATCENVGM 197 Query: 201 RVLDHIVIGRGEYVSFAERGWI 222 +++DHI++ + + SF + G + Sbjct: 198 KLIDHIIVTQKSHFSFYDSGLL 219 >UniRef50_C1TLK8 DNA repair protein radc n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TLK8_9BACT Length = 214 Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/202 (33%), Positives = 111/202 (54%) Query: 9 MPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSG 68 +PRE++ + G +AL DVELLA+ LRTG G+DVL L++ +L+ FG L GL + +++ Sbjct: 6 LPRERLFRNGATALNDVELLAILLRTGGGGEDVLGLSESILDGFGGLGGLTRASVKEYLS 65 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 GIG AK A L E+ RR R+ S LS + +Q +L+ E RE + IFL Sbjct: 66 FKGIGGAKAASLAAAVEIGRRLAIYNGRDPSRPLSWRDELKDIQVRLSDEPREFIVAIFL 125 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 + R ++ + G + + R +R A++++A ++L HNHP G E S D+ +T Sbjct: 126 GDRERFLSKEMISFGGPDGASLDIRHFMRVAVRLDAYGVVLVHNHPDGSLESSAEDRTLT 185 Query: 189 ERIIKSCQFMDLRVLDHIVIGR 210 + + + +R H ++ R Sbjct: 186 RIVRERLDALGIRFHGHYIVSR 207 >UniRef50_A9HJN5 DNA repair protein RadC n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HJN5_GLUDA Length = 221 Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/189 (31%), Positives = 97/189 (51%), Gaps = 8/189 (4%) Query: 38 GKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELAR----RYYNV 93 G D A+ +L FG++ + ++ + + VA Q++ I L R R Sbjct: 37 GADPADAARALLARFGTIGAVFAADPAELAS----AVAGRLQIRVIVPLLREAAIRLMRA 92 Query: 94 RMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPR 153 R+R+ L + +LQ+ L + E F V+FLD R+I L GT++ V+PR Sbjct: 93 RIRQGDLLSCHDALMAYLQASLARDTVEQFRVLFLDRGTRLIADEVLAQGTIDQTPVYPR 152 Query: 154 EIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEY 213 E++R AI++ AS LIL HNHP PS+ D +T R+ + + L V DH+++G G Sbjct: 153 EVMRRAIQLKASELILVHNHPGWNPTPSREDIAMTRRLAQIATVLGLTVRDHVIVGNGAS 212 Query: 214 VSFAERGWI 222 +SF + G + Sbjct: 213 ISFRQAGLL 221 >UniRef50_Q2B8H5 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B8H5_9BACI Length = 228 Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/213 (30%), Positives = 115/213 (53%), Gaps = 10/213 (4%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGK-DVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 RE++ +G +L+ L + G + K +V L M LY L E + Sbjct: 25 RERVNYYGDQYAELADLICLII--GNKAKPEVCNLLSSM--TIKELYNLSIDELIELGLT 80 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 + FA + A++ ++ M E L SPE ++ LT E++E F+V+ LD Sbjct: 81 KQVAERFFATIL----FAKKINSMFMPEVECLRSPEDAYHAVK-YLTNEDQETFVVLALD 135 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 ++H++I+ + ++ GT++ VHPRE+ R A+ +A+ +I+AH HPSG PS+ D +T+ Sbjct: 136 TKHQLISRKEIYKGTIDAAIVHPREVFRFALNKSAAHIIVAHQHPSGNCSPSRDDIEVTK 195 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 R+ K + + + + DHI++GR +Y S ++G + Sbjct: 196 RLRKVGEEIGIPLSDHIIVGRNKYFSMKKQGHL 228 >UniRef50_Q0GNI5 Smu18B n=1 Tax=uncultured organism RepID=Q0GNI5_9ZZZZ Length = 154 Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/118 (46%), Positives = 77/118 (65%) Query: 103 SPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKI 162 SP L +L EE E+F+VI L++QHR+I + + G N VHPRE+ R AI I Sbjct: 35 SPRDAVVALAPRLAREEVEVFLVIALNAQHRMIALQEVTRGIQNCSLVHPREVFRIAIAI 94 Query: 163 NASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 A+A+I+AHNHPSG PS D+ +TE+++ + + +DL V DHI++G G Y SFAE G Sbjct: 95 GAAAIIVAHNHPSGDPAPSADDRAVTEQLVAAGRLLDLPVHDHIIVGAGSYTSFAEAG 152 >UniRef50_B4RG10 DNA repair protein RadC n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RG10_PHEZH Length = 256 Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 64/195 (32%), Positives = 99/195 (50%), Gaps = 2/195 (1%) Query: 22 LTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLK 81 L+D EL+A + R +D A+ LE+ G L L + IG QL+ Sbjct: 57 LSDAELVARVIDPRRRSRDSEARARLCLESCGGLGPALALADPRLE--RQIGAEACLQLR 114 Query: 82 GIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLF 141 + E + R + + + T ++L++ L E RE F VIFLD+ + L Sbjct: 115 LVREASIRTTRGAVISRRFDANAKRTHDYLRALLEFETRESFRVIFLDASGAWSSDEELG 174 Query: 142 SGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLR 201 GT++H V+ RE++REA++ +A+AL+L HNHPSG PS AD +T I + + + Sbjct: 175 RGTVDHAPVYVREVMREALRRDAAALVLVHNHPSGDPTPSAADVQVTSEIAAAASALGMS 234 Query: 202 VLDHIVIGRGEYVSF 216 V DH+V+G SF Sbjct: 235 VKDHLVVGSHGVASF 249 >UniRef50_Q2GEH3 DNA repair protein RadC n=2 Tax=Neorickettsia RepID=Q2GEH3_NEOSM Length = 236 Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 52/183 (28%), Positives = 98/183 (53%) Query: 40 DVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREES 99 D+ LAK +L+ FG L ++ + V+G+ A A ++ + E + + + Sbjct: 54 DIKPLAKSLLKEFGDFKKLFAADPDDLRSVNGVSDAVVALIRTVRESMKAILRKDLTSRT 113 Query: 100 PLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREA 159 L S + ++L+ + + E V+FL+ ++ +I G +H + REII++ Sbjct: 114 TLKSWKSVVDYLRLSIGNKPVETIRVLFLNKKYTLIREYVQELGAADHTPLCMREIIKKC 173 Query: 160 IKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAER 219 + ASA+++AHNHPSG PS+ D LIT ++ K CQ +D++++DH ++ ++ SF Sbjct: 174 LTCGASAMVIAHNHPSGNPLPSQEDLLITGKLKKICQKVDVQLVDHFIVTPHDHFSFVVN 233 Query: 220 GWI 222 G + Sbjct: 234 GLL 236 >UniRef50_Q0FHF8 DNA repair protein RadC n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FHF8_9RHOB Length = 168 Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 51/151 (33%), Positives = 90/151 (59%), Gaps = 5/151 (3%) Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G A+ + ++ RR+ R + L S M ++L E E+F V+ LD Sbjct: 16 GFSEAEIETIDAARDILRRHA----RATAVLQSWTMLTDYLALNAVRERVEVFRVLLLDR 71 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++++I + + G+++HV V+ E++R A+ ++ASALIL HNHPSG +PS+AD +T + Sbjct: 72 KNKLIRDKIMSRGSIDHVPVYVSEVMRSALVLDASALILCHNHPSGDPQPSQADIDMTRK 131 Query: 191 IIKSCQFMDLRVLDHIVIGRG-EYVSFAERG 220 I+ +C+ MD+ + DH+++G G E +F+ R Sbjct: 132 IVDACRVMDITLHDHLIVGFGREQAAFSMRA 162 >UniRef50_C0GR82 DNA repair protein RadC n=2 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GR82_9DELT Length = 145 Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 45/102 (44%), Positives = 69/102 (67%) Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+V+F+D+++R+I + + GT++ + V PREIIR AI AS +IL HNHP G +EP Sbjct: 44 ENFVVLFVDNKNRMICKKVVAKGTVDQIPVFPREIIRHAILKQASGIILGHNHPGGASEP 103 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 SK D+ +T +I + + +RVLDHI+I + SF E G++ Sbjct: 104 SKQDRELTSKIKRIAMELGIRVLDHIIICDSGHFSFQENGYL 145 >UniRef50_C7H3R5 Putative DNA repair protein RadC n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3R5_9FIRM Length = 241 Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 105/208 (50%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 R ++ ++G+ +L E+L L KD LA +++ FG G+L + E V Sbjct: 16 RARVEQYGLESLEPHEVLEYVLYITNTRKDTNGLAHVLMDRFGDFAGVLDASEEDLLTVE 75 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+G + L + ++ R Y + + + + + E+L +Q G +E ++ LD Sbjct: 76 GVGPSTARMLHLLPQVGRYYTQCAVNGKKCMKTTDQLVEYLMAQFAGTVQERALLTALDG 135 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 + R+ L GT + V + ++++ A+K +++L HNHP+G A PS+ D + TE Sbjct: 136 RSRIKGLFWLRDGTSDRVSLEIKDVVAAALKGGTDSVVLCHNHPNGVALPSREDLMATEN 195 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAE 218 I+++ + + + DHI++ EY S E Sbjct: 196 IVRALGLVKVHLRDHIILTESEYFSMRE 223 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B5EXE3 UPF0758 protein yicR n=116 Tax=Enterobacteriacea... 283 3e-75 UniRef50_A4W511 UPF0758 protein Ent638_0101 n=3 Tax=Enterobacter... 278 1e-73 UniRef50_A7MQ95 UPF0758 protein ESA_04094 n=32 Tax=Bacteria RepI... 277 2e-73 UniRef50_B0UUW7 UPF0758 protein HSM_0009 n=10 Tax=Pasteurellacea... 272 7e-72 UniRef50_B2UAP0 UPF0758 protein Rpic_2712 n=3 Tax=Burkholderiace... 258 1e-67 UniRef50_A5UDB6 UPF0758 protein CGSHiEE_07200 n=30 Tax=Gammaprot... 257 2e-67 UniRef50_Q31EB6 UPF0758 protein Tcr_1917 n=5 Tax=Gammaproteobact... 257 2e-67 UniRef50_A9VIS8 UPF0758 protein BcerKBAB4_4299 n=107 Tax=Firmicu... 257 3e-67 UniRef50_B3E339 UPF0758 protein Glov_0523 n=8 Tax=Desulfuromonad... 256 3e-67 UniRef50_A1SR15 UPF0758 protein Ping_0056 n=2 Tax=Gammaproteobac... 256 3e-67 UniRef50_Q46XP0 UPF0758 protein Reut_A2732 n=12 Tax=Proteobacter... 255 9e-67 UniRef50_Q3A8G4 UPF0758 protein Pcar_0065 n=2 Tax=Bacteria RepID... 255 1e-66 UniRef50_B2FJW1 UPF0758 protein Smlt0399 n=129 Tax=Proteobacteri... 254 1e-66 UniRef50_B5YIR9 DNA repair protein n=1 Tax=Thermodesulfovibrio y... 253 2e-66 UniRef50_C9L5T8 DNA repair protein RadC n=4 Tax=Clostridiales Re... 251 1e-65 UniRef50_D1JB12 Probable DNA repair protein radC homolog n=2 Tax... 250 2e-65 UniRef50_D0MFA0 DNA repair protein RadC n=1 Tax=Rhodothermus mar... 249 6e-65 UniRef50_A5ZRS6 Putative uncharacterized protein n=5 Tax=Clostri... 247 2e-64 UniRef50_C7GE95 DNA repair protein RadC n=2 Tax=Roseburia RepID=... 246 5e-64 UniRef50_Q1AVT6 UPF0758 protein Rxyl_1530 n=3 Tax=Bacteria RepID... 245 6e-64 UniRef50_B2A699 DNA repair protein RadC n=1 Tax=Natranaerobius t... 245 8e-64 UniRef50_Q46A65 UPF0758 protein Mbar_A2303 n=2 Tax=Methanosarcin... 245 8e-64 UniRef50_C9Y8Q3 DNA repair protein radC homolog n=1 Tax=Curvibac... 245 9e-64 UniRef50_A5KLJ1 Putative uncharacterized protein n=5 Tax=Clostri... 245 9e-64 UniRef50_Q4UPP0 UPF0758 protein XC_3944 n=35 Tax=Proteobacteria ... 245 1e-63 UniRef50_A6TQH8 UPF0758 protein Amet_2289 n=54 Tax=cellular orga... 245 1e-63 UniRef50_Q6F7Z8 UPF0758 protein ACIAD3126 n=19 Tax=Proteobacteri... 243 3e-63 UniRef50_B2V090 UPF0758 protein CLH_0547 n=18 Tax=Clostridium Re... 242 5e-63 UniRef50_Q82ZX1 UPF0758 protein EF_2926 n=40 Tax=Firmicutes RepI... 242 7e-63 UniRef50_Q4FQM6 UPF0758 protein Psyc_1834 n=3 Tax=Moraxellaceae ... 242 7e-63 UniRef50_C6LCB9 DNA repair protein RadC n=3 Tax=Clostridiales Re... 242 8e-63 UniRef50_C4Z083 DNA repair protein RadC n=1 Tax=Eubacterium elig... 241 9e-63 UniRef50_A8R890 Putative uncharacterized protein n=1 Tax=Eubacte... 241 1e-62 UniRef50_Q21TE2 UPF0758 protein Rfer_3252 n=12 Tax=cellular orga... 241 1e-62 UniRef50_D1R5B1 Putative uncharacterized protein n=1 Tax=Parachl... 240 2e-62 UniRef50_A5IM26 UPF0758 protein Tpet_1235 n=7 Tax=Thermotogaceae... 240 2e-62 UniRef50_A5FRP1 DNA repair protein RadC n=6 Tax=cellular organis... 239 4e-62 UniRef50_Q2S042 UPF0758 protein SRU_2338 n=1 Tax=Salinibacter ru... 239 6e-62 UniRef50_C5TNC6 DNA repair protein RadC n=3 Tax=Neisseria RepID=... 238 7e-62 UniRef50_A3ER13 DNA repair protein (RadC) n=3 Tax=Leptospirillum... 238 9e-62 UniRef50_B9E733 DNA repair protein RadC homolog n=1 Tax=Macrococ... 238 1e-61 UniRef50_A9IU27 UPF0758 protein Bpet3149 n=5 Tax=Bordetella RepI... 238 1e-61 UniRef50_A6QHJ5 UPF0758 protein NWMN_1555 n=52 Tax=Staphylococcu... 238 1e-61 UniRef50_Q0AWG3 UPF0758 protein Swol_1642 n=12 Tax=Firmicutes Re... 238 1e-61 UniRef50_C8WXL6 DNA repair protein RadC n=3 Tax=Alicyclobacillus... 237 2e-61 UniRef50_Q3AF80 UPF0758 protein CHY_0341 n=1 Tax=Carboxydothermu... 236 3e-61 UniRef50_B7C9V0 Putative uncharacterized protein n=1 Tax=Eubacte... 236 4e-61 UniRef50_B4RM65 UPF0758 protein NGK_1225 n=25 Tax=Neisseriaceae ... 235 8e-61 UniRef50_UPI000185C66E DNA repair protein RadC n=1 Tax=Capnocyto... 235 8e-61 UniRef50_C7RDS9 DNA repair protein RadC n=3 Tax=Anaerococcus Rep... 234 2e-60 UniRef50_B4CZF8 DNA repair protein RadC n=2 Tax=Verrucomicrobia ... 234 2e-60 UniRef50_Q64AS5 DNA repair proteins n=1 Tax=uncultured archaeon ... 233 3e-60 UniRef50_A9KL05 DNA repair protein RadC n=7 Tax=Clostridiales Re... 233 4e-60 UniRef50_B5YDI9 DNA repair protein n=2 Tax=Dictyoglomus RepID=B5... 232 5e-60 UniRef50_C7M9C6 DNA repair protein RadC n=1 Tax=Capnocytophaga o... 232 6e-60 UniRef50_A5FMW5 UPF0758 protein Fjoh_0413 n=33 Tax=Bacteroidetes... 232 6e-60 UniRef50_D2MNQ5 Putative DNA repair protein RadC n=1 Tax=Bulleid... 232 7e-60 UniRef50_A1B4F1 UPF0758 protein Pden_2304 n=44 Tax=Alphaproteoba... 231 8e-60 UniRef50_B7ANR2 Putative uncharacterized protein n=1 Tax=Bactero... 231 1e-59 UniRef50_C7PSZ0 DNA repair protein RadC n=1 Tax=Chitinophaga pin... 231 1e-59 UniRef50_Q38XC8 UPF0758 protein LCA_0852 n=1 Tax=Lactobacillus s... 231 1e-59 UniRef50_A2RLC4 UPF0758 protein llmg_1515 n=4 Tax=Lactococcus la... 231 2e-59 UniRef50_Q6MAB0 UPF0758 protein pc1765 n=1 Tax=Candidatus Protoc... 230 2e-59 UniRef50_A6DS55 DNA repair protein RadC n=1 Tax=Lentisphaera ara... 230 3e-59 UniRef50_C4ZA49 DNA repair protein RadC n=1 Tax=Eubacterium rect... 229 6e-59 UniRef50_C5NXB5 DNA repair protein RadC homolog n=1 Tax=Gemella ... 228 1e-58 UniRef50_UPI0001C34E02 DNA repair protein RadC n=1 Tax=Clostridi... 227 2e-58 UniRef50_C7GYN9 DNA repair protein RadC n=1 Tax=Eubacterium saph... 227 2e-58 UniRef50_UPI0001BC32AB DNA repair protein RadC n=1 Tax=Butyrivib... 227 3e-58 UniRef50_C9LCX8 DNA repair protein RadC n=1 Tax=Prevotella tanne... 226 3e-58 UniRef50_C0BM81 DNA repair protein RadC n=2 Tax=Bacteroidetes Re... 226 4e-58 UniRef50_B9XSW5 DNA repair protein RadC n=1 Tax=bacterium Ellin5... 226 5e-58 UniRef50_A1BHA1 UPF0758 protein Cpha266_1761 n=11 Tax=Chlorobiac... 225 6e-58 UniRef50_A7HJG0 DNA repair protein RadC n=3 Tax=Thermotogaceae R... 225 7e-58 UniRef50_D1VVJ8 DNA repair protein RadC-like protein n=1 Tax=Pep... 225 7e-58 UniRef50_C4FYP9 Putative uncharacterized protein n=1 Tax=Abiotro... 225 7e-58 UniRef50_B9Y7M6 Putative uncharacterized protein n=1 Tax=Holdema... 225 9e-58 UniRef50_Q3JV52 UPF0758 protein BURPS1710b_1139 n=75 Tax=Proteob... 224 1e-57 UniRef50_UPI000196B4AA hypothetical protein CATMIT_00107 n=1 Tax... 224 2e-57 UniRef50_C2KVW9 Possible DNA repair protein RadC n=1 Tax=Oribact... 224 2e-57 UniRef50_D1QST5 DNA repair protein RadC n=13 Tax=Bacteroidales R... 223 3e-57 UniRef50_A9BIK5 DNA repair protein RadC n=1 Tax=Petrotoga mobili... 223 3e-57 UniRef50_D2BJ47 DNA repair protein n=5 Tax=Dehalococcoides RepID... 223 4e-57 UniRef50_B5YL92 DNA repair protein RadC n=1 Tax=Thermodesulfovib... 222 5e-57 UniRef50_B5Y6A0 UPF0758 protein COPRO5265_1522 n=1 Tax=Coprother... 222 9e-57 UniRef50_B9L1S0 DNA repair protein radC homolog n=4 Tax=Bacteria... 221 9e-57 UniRef50_C2BCF6 DNA repair protein RadC n=2 Tax=Anaerococcus Rep... 221 1e-56 UniRef50_Q7MVX9 UPF0758 protein PG_0894 n=24 Tax=Bacteroidales R... 221 1e-56 UniRef50_B2URH1 DNA repair protein RadC n=1 Tax=Akkermansia muci... 221 1e-56 UniRef50_C6BYC2 DNA repair protein RadC n=1 Tax=Desulfovibrio sa... 220 2e-56 UniRef50_C8VVH2 DNA repair protein RadC n=1 Tax=Desulfotomaculum... 220 2e-56 UniRef50_A4W1K3 UPF0758 protein SSU98_1084 n=76 Tax=Streptococcu... 220 3e-56 UniRef50_Q2LSS5 DNA repair protein n=1 Tax=Syntrophus aciditroph... 220 3e-56 UniRef50_B1YJT0 DNA repair protein RadC n=2 Tax=Exiguobacterium ... 219 5e-56 UniRef50_C0BG63 DNA repair protein RadC n=1 Tax=Flavobacteria ba... 219 6e-56 UniRef50_Q2J299 UPF0758 protein RPB_0700 n=15 Tax=Alphaproteobac... 218 1e-55 UniRef50_B2V8J4 DNA repair protein RadC n=5 Tax=Aquificales RepI... 218 1e-55 UniRef50_C8NZ93 DNA repair protein RadC n=1 Tax=Erysipelothrix r... 218 1e-55 UniRef50_A6Q5Q5 DNA repair protein RadC n=2 Tax=unclassified Eps... 218 2e-55 UniRef50_Q5WTW4 UPF0758 protein lpl2409 n=6 Tax=Legionella RepID... 218 2e-55 UniRef50_O67541 UPF0758 protein aq_1610 n=2 Tax=Aquificaceae Rep... 217 2e-55 UniRef50_B0S3Y4 UPF0758 protein FMG_0357 n=2 Tax=Finegoldia magn... 217 3e-55 UniRef50_C4V569 DNA repair protein RadC n=2 Tax=Selenomonas RepI... 216 3e-55 UniRef50_D2RM81 DNA repair protein RadC n=2 Tax=Acidaminococcus ... 216 5e-55 UniRef50_Q8DI83 UPF0758 protein tlr1707 n=31 Tax=Cyanobacteria R... 214 2e-54 UniRef50_C9LLN8 DNA repair protein RadC n=1 Tax=Dialister invisu... 214 2e-54 UniRef50_A1UT15 DNA repair protein, RadC family n=3 Tax=Bartonel... 213 3e-54 UniRef50_C7TC16 DNA repair protein n=8 Tax=Lactobacillus RepID=C... 213 3e-54 UniRef50_B9MPC4 DNA repair protein RadC n=2 Tax=Clostridia RepID... 213 5e-54 UniRef50_C0Q9Z9 RadC3 n=1 Tax=Desulfobacterium autotrophicum HRM... 212 6e-54 UniRef50_B0N2U6 Putative uncharacterized protein n=3 Tax=Bacteri... 212 6e-54 UniRef50_D1W0Q6 Putative DNA repair protein RadC n=2 Tax=Prevote... 211 9e-54 UniRef50_D1U9S4 DNA repair protein RadC n=1 Tax=Desulfovibrio ae... 210 2e-53 UniRef50_Q0BRK0 DNA repair protein radC n=5 Tax=Alphaproteobacte... 210 2e-53 UniRef50_C4XRP2 DNA repair protein RadC n=4 Tax=Desulfovibrional... 210 3e-53 UniRef50_C0GMV6 DNA repair protein RadC n=1 Tax=Desulfonatronosp... 210 4e-53 UniRef50_C8N8A0 DNA repair protein RadC n=1 Tax=Cardiobacterium ... 209 6e-53 UniRef50_A9NF52 DNA repair protein n=1 Tax=Acholeplasma laidlawi... 208 9e-53 UniRef50_A5EYF9 Response regulator receiver domain protein-DNA r... 208 1e-52 UniRef50_Q2G8R8 DNA repair protein RadC n=5 Tax=Sphingomonadales... 207 2e-52 UniRef50_Q1RK76 DNA repair protein RadC n=11 Tax=Rickettsia RepI... 207 2e-52 UniRef50_B2KEG6 DNA repair protein RadC n=1 Tax=Elusimicrobium m... 205 8e-52 UniRef50_A5URD0 UPF0758 protein RoseRS_0767 n=7 Tax=Bacteria Rep... 205 9e-52 UniRef50_C2MB02 DNA repair protein RadC n=1 Tax=Porphyromonas ue... 205 9e-52 UniRef50_D1BNF1 DNA repair protein RadC n=3 Tax=Veillonella RepI... 205 1e-51 UniRef50_Q2FT43 UPF0758 protein Mhun_2739 n=5 Tax=Archaea RepID=... 203 3e-51 UniRef50_UPI0000E0FF1E DNA repair protein RadC n=1 Tax=Rhodobact... 203 4e-51 UniRef50_UPI00016C0069 DNA repair protein RadC n=1 Tax=Epulopisc... 203 5e-51 UniRef50_D1N9M0 DNA repair protein RadC n=1 Tax=Victivallis vade... 203 5e-51 UniRef50_C3WLA1 DNA repair protein radC n=2 Tax=Fusobacterium Re... 201 1e-50 UniRef50_Q73P26 DNA repair protein RadC n=2 Tax=Treponema RepID=... 201 1e-50 UniRef50_B1C9I2 Putative uncharacterized protein n=1 Tax=Anaerof... 201 2e-50 UniRef50_B8J197 DNA repair protein RadC n=4 Tax=Desulfovibrio Re... 200 3e-50 UniRef50_B0T9F0 DNA repair protein RadC n=1 Tax=Caulobacter sp. ... 200 3e-50 UniRef50_A8ZUS2 DNA repair protein RadC n=1 Tax=Desulfococcus ol... 200 4e-50 UniRef50_Q0F0W4 DNA repair protein RadC n=1 Tax=Mariprofundus fe... 199 5e-50 UniRef50_Q18B06 UPF0758 protein CD1144 n=8 Tax=Clostridiaceae Re... 199 5e-50 UniRef50_Q6AQC9 Related to DNA repair protein RadC n=4 Tax=Delta... 198 9e-50 UniRef50_C5SK46 DNA repair protein RadC n=1 Tax=Asticcacaulis ex... 198 1e-49 UniRef50_Q2GL92 DNA repair protein RadC n=12 Tax=Rickettsiales R... 197 2e-49 UniRef50_UPI0001BC61BD DNA repair protein radC n=3 Tax=Fusobacte... 197 3e-49 UniRef50_B8FHA4 DNA repair protein RadC n=1 Tax=Desulfatibacillu... 196 3e-49 UniRef50_Q2IG79 DNA repair protein RadC n=8 Tax=Anaeromyxobacter... 196 5e-49 UniRef50_Q8UEZ6 UPF0758 protein Atu1607 n=100 Tax=Alphaproteobac... 196 6e-49 UniRef50_Q8RF15 UPF0758 protein FN0909 n=11 Tax=Fusobacterium Re... 194 1e-48 UniRef50_C1A4H3 DNA repair protein RadC n=1 Tax=Gemmatimonas aur... 194 1e-48 UniRef50_D0LGP2 DNA repair protein RadC n=1 Tax=Haliangium ochra... 193 5e-48 UniRef50_B1H050 DNA repair protein RadC n=1 Tax=uncultured Termi... 192 7e-48 UniRef50_C0R2T1 DNA repair protein RadC n=7 Tax=Wolbachia RepID=... 192 7e-48 UniRef50_A0L491 DNA repair protein RadC n=4 Tax=Bacteria RepID=A... 192 7e-48 UniRef50_Q1MS20 DNA repair proteins n=3 Tax=Desulfovibrionaceae ... 191 1e-47 UniRef50_Q1DAY3 DNA repair protein RadC n=1 Tax=Myxococcus xanth... 191 1e-47 UniRef50_C9RLS9 DNA repair protein RadC n=1 Tax=Fibrobacter succ... 191 2e-47 UniRef50_A7GTD5 DNA repair protein RadC n=3 Tax=Bacillaceae RepI... 191 2e-47 UniRef50_A2SPN1 DNA repair protein RadC n=1 Tax=Methanocorpuscul... 190 3e-47 UniRef50_A8ZTW3 DNA repair protein RadC n=5 Tax=Bacteria RepID=A... 189 4e-47 UniRef50_C4GB45 Putative uncharacterized protein n=1 Tax=Shuttle... 189 5e-47 UniRef50_UPI00016B261F DNA repair protein RadC n=2 Tax=candidate... 188 1e-46 UniRef50_Q7UL21 DNA repair protein n=4 Tax=Bacteria RepID=Q7UL21... 188 1e-46 UniRef50_B9QT39 DNA repair protein RadC n=1 Tax=Labrenzia alexan... 187 2e-46 UniRef50_A9GNT0 DNA repair protein n=1 Tax=Sorangium cellulosum ... 186 4e-46 UniRef50_A7VWV8 Putative uncharacterized protein n=1 Tax=Clostri... 186 7e-46 UniRef50_B6AT60 DNA repair protein RadC n=1 Tax=Rhodobacterales ... 185 7e-46 UniRef50_C6XNR3 DNA repair protein RadC n=1 Tax=Hirschia baltica... 185 7e-46 UniRef50_Q1WT78 DNA repair protein n=3 Tax=Lactobacillus RepID=Q... 184 2e-45 UniRef50_D2EK65 DNA repair protein n=1 Tax=Pediococcus acidilact... 183 3e-45 UniRef50_B0PEI5 Putative uncharacterized protein n=1 Tax=Anaerot... 183 4e-45 UniRef50_B0T9R6 DNA repair protein RadC n=4 Tax=Alphaproteobacte... 182 6e-45 UniRef50_A0LNF4 DNA repair protein RadC n=1 Tax=Syntrophobacter ... 182 8e-45 UniRef50_D1PFM8 DNA repair protein RadC n=1 Tax=Prevotella copri... 181 2e-44 UniRef50_A5VEU8 DNA repair protein RadC n=4 Tax=Sphingomonadales... 181 2e-44 UniRef50_C9BR87 DNA repair protein RadC n=4 Tax=Enterococcus fae... 180 3e-44 UniRef50_A6NZB7 Putative uncharacterized protein n=1 Tax=Bactero... 179 4e-44 UniRef50_A6GHT1 DNA repair protein RadC n=1 Tax=Plesiocystis pac... 179 6e-44 UniRef50_C1SJ65 DNA repair protein radc n=1 Tax=Denitrovibrio ac... 178 2e-43 UniRef50_A8S889 Putative uncharacterized protein n=1 Tax=Faecali... 177 2e-43 UniRef50_Q03EP2 DNA repair protein n=1 Tax=Pediococcus pentosace... 177 2e-43 UniRef50_Q5FNC4 DNA repair protein RadC n=1 Tax=Gluconobacter ox... 176 5e-43 UniRef50_C9M9H6 DNA repair protein RadC n=1 Tax=Jonquetella anth... 175 1e-42 UniRef50_D1PL34 DNA repair protein RadC n=1 Tax=Subdoligranulum ... 174 2e-42 UniRef50_D1Y6L3 DNA repair protein RadC n=1 Tax=Pyramidobacter p... 173 3e-42 UniRef50_C7H3R5 Putative DNA repair protein RadC n=1 Tax=Faecali... 173 4e-42 UniRef50_Q2B8H5 Putative uncharacterized protein n=1 Tax=Bacillu... 173 4e-42 UniRef50_C7JGI7 DNA repair protein RadC n=8 Tax=Acetobacter past... 173 5e-42 UniRef50_C0EH16 Putative uncharacterized protein n=1 Tax=Clostri... 172 6e-42 UniRef50_A4J365 DNA repair protein RadC n=1 Tax=Desulfotomaculum... 172 7e-42 UniRef50_C0GE80 DNA repair protein RadC n=1 Tax=Dethiobacter alk... 171 1e-41 UniRef50_A0Z2T6 DNA repair protein RadC n=1 Tax=marine gamma pro... 170 3e-41 UniRef50_B0MUL4 Putative uncharacterized protein n=1 Tax=Alistip... 169 5e-41 UniRef50_C0R372 DNA repair protein RadC, putative n=11 Tax=Wolba... 168 1e-40 UniRef50_C1TLK8 DNA repair protein radc n=1 Tax=Dethiosulfovibri... 166 5e-40 UniRef50_C5V0A3 DNA repair protein RadC n=1 Tax=Gallionella ferr... 166 5e-40 UniRef50_B4RG10 DNA repair protein RadC n=1 Tax=Phenylobacterium... 165 1e-39 UniRef50_B0MNH0 Putative uncharacterized protein n=1 Tax=Eubacte... 165 1e-39 UniRef50_Q2GEH3 DNA repair protein RadC n=2 Tax=Neorickettsia Re... 164 2e-39 UniRef50_B1ZYU3 DNA repair protein RadC n=3 Tax=Verrucomicrobia ... 164 2e-39 UniRef50_A9AE97 DNA repair protein n=8 Tax=Bacteria RepID=A9AE97... 164 2e-39 UniRef50_C1QC41 DNA repair protein n=2 Tax=Brachyspira RepID=C1Q... 163 4e-39 UniRef50_B8H0Z9 DNA repair protein radC n=1 Tax=Caulobacter cres... 163 6e-39 UniRef50_B6JJV2 DNA repair protein RadC n=5 Tax=Alphaproteobacte... 162 1e-38 UniRef50_Q04U23 DNA repair protein n=4 Tax=Leptospira RepID=Q04U... 161 2e-38 UniRef50_C7NDB9 DNA repair protein RadC n=4 Tax=Fusobacteriaceae... 160 3e-38 UniRef50_Q2S8K4 DNA repair protein n=1 Tax=Hahella chejuensis KC... 159 5e-38 UniRef50_A8L178 DNA repair protein RadC n=3 Tax=Actinomycetales ... 159 6e-38 UniRef50_C0R3D5 DNA repair protein RadC n=2 Tax=Wolbachia RepID=... 159 6e-38 UniRef50_D1AWS8 DNA repair protein RadC n=1 Tax=Streptobacillus ... 158 1e-37 UniRef50_P52140 UPF0758 protein yfjY n=148 Tax=Enterobacteriacea... 157 3e-37 UniRef50_Q9KR57 UPF0758 protein VC_1786 n=59 Tax=Proteobacteria ... 157 3e-37 UniRef50_Q9KUK8 UPF0758 protein VC_0510 n=11 Tax=Gammaproteobact... 155 9e-37 UniRef50_B4X5D3 DNA repair protein RadC n=4 Tax=Alcanivorax sp. ... 155 1e-36 UniRef50_A0R7V6 DNA repair protein RadC n=5 Tax=Desulfuromonadal... 155 1e-36 UniRef50_C4LDH2 DNA repair protein RadC n=2 Tax=Aeromonadaceae R... 154 1e-36 UniRef50_C8U0Q3 Predicted DNA repair protein n=21 Tax=Enterobact... 154 1e-36 UniRef50_C7JGI6 DNA repair protein RadC n=9 Tax=Acetobacter RepI... 154 2e-36 UniRef50_A4SUN7 DNA repair protein n=2 Tax=Aeromonas salmonicida... 154 2e-36 UniRef50_A1K759 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=... 154 2e-36 UniRef50_B3HA66 DNA repair protein RadC n=3 Tax=Enterobacteriace... 154 2e-36 UniRef50_C6J5M2 DNA repair protein RadC n=1 Tax=Paenibacillus sp... 154 2e-36 UniRef50_A6SWN0 DNA repair protein RadC n=14 Tax=Proteobacteria ... 153 4e-36 UniRef50_A7FEQ9 DNA repair protein, RadC family n=4 Tax=Yersinia... 153 5e-36 UniRef50_C5D8D2 DNA repair protein RadC n=4 Tax=Firmicutes RepID... 153 6e-36 UniRef50_C2E2B4 DNA repair protein RadC n=8 Tax=Lactobacillus je... 152 7e-36 UniRef50_Q5E054 DNA repair protein RadC n=3 Tax=Gammaproteobacte... 152 8e-36 UniRef50_Q7UT53 RadC n=1 Tax=Rhodopirellula baltica RepID=Q7UT53... 152 9e-36 UniRef50_A9HJN5 DNA repair protein RadC n=1 Tax=Gluconacetobacte... 152 9e-36 UniRef50_D2NHT0 Putative phage DNA repair protein n=1 Tax=Escher... 152 1e-35 UniRef50_B1I0K4 DNA repair protein radC-like protein n=1 Tax=Lys... 152 1e-35 UniRef50_B9ECC3 Putative uncharacterized protein n=1 Tax=Macroco... 151 1e-35 UniRef50_B4Y2Y7 RadC n=1 Tax=Aquabacterium sp. PL1F5 RepID=B4Y2Y... 151 1e-35 UniRef50_Q7VMM9 Conserved possible DNA repair protein n=1 Tax=Ha... 151 2e-35 UniRef50_Q47ZW8 DNA repair protein, RadC family protein n=20 Tax... 151 2e-35 UniRef50_Q0ACW7 DNA repair protein RadC n=2 Tax=Proteobacteria R... 151 2e-35 UniRef50_Q2SAN5 DNA repair protein n=2 Tax=Hahella chejuensis KC... 151 2e-35 UniRef50_Q04B84 DNA repair protein n=2 Tax=Lactobacillus delbrue... 151 2e-35 UniRef50_Q3BQ28 RadC family DNA repair protein n=5 Tax=Xanthomon... 150 2e-35 UniRef50_C6E4Z0 DNA repair protein RadC n=3 Tax=Geobacter RepID=... 150 3e-35 UniRef50_B8KQ45 DNA repair protein RadC n=1 Tax=gamma proteobact... 150 4e-35 UniRef50_B1IPT7 DNA repair protein RadC n=3 Tax=Enterobacteriace... 149 4e-35 UniRef50_C6DAT0 DNA repair protein RadC n=5 Tax=Enterobacteriace... 149 5e-35 UniRef50_B4S9N8 DNA repair protein RadC n=1 Tax=Prosthecochloris... 149 5e-35 UniRef50_Q042N7 DNA repair protein n=7 Tax=Lactobacillus RepID=Q... 149 8e-35 UniRef50_Q5DY97 DNA repair protein RadC n=17 Tax=Proteobacteria ... 149 8e-35 UniRef50_C5SDF8 DNA repair protein RadC n=1 Tax=Allochromatium v... 148 1e-34 UniRef50_Q9LAI3 RadC (Fragment) n=2 Tax=Firmicutes RepID=Q9LAI3_... 148 1e-34 UniRef50_Q3JDF2 DNA repair protein RadC n=4 Tax=Gammaproteobacte... 147 2e-34 UniRef50_B5V5B9 RadC n=5 Tax=Firmicutes RepID=B5V5B9_BACCE 147 2e-34 UniRef50_B3TB70 Putative RadC, DNA repair protein n=1 Tax=uncult... 147 3e-34 UniRef50_B0RXB0 DNA repair protein radC homolog n=3 Tax=Xanthomo... 147 3e-34 UniRef50_Q8VR59 Putative intergenic-region protein n=24 Tax=Esch... 146 5e-34 UniRef50_Q0AJV4 DNA repair protein RadC n=18 Tax=Proteobacteria ... 146 6e-34 Sequences not found previously or not previously below threshold: >UniRef50_B5EXE3 UPF0758 protein yicR n=116 Tax=Enterobacteriaceae RepID=YICR_SALA4 Length = 221 Score = 283 bits (725), Expect = 3e-75, Method: Composition-based stats. Identities = 180/217 (82%), Positives = 206/217 (94%) Query: 6 QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQ 65 L+PREKML+ GI++L+DVELLALFLRTGT GKDV+TLAKE+L++FGSLYGLL++++ Q Sbjct: 5 DELLPREKMLRSGIASLSDVELLALFLRTGTPGKDVMTLAKEILQHFGSLYGLLSADFAQ 64 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMV 125 F GV+GIG+AKFAQLKGIAELARRYY+VRM EES LLSPEMTREFLQSQLTGEEREIF+V Sbjct: 65 FRGVNGIGLAKFAQLKGIAELARRYYSVRMNEESALLSPEMTREFLQSQLTGEEREIFLV 124 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 IFLD+QHRV+ H RLFSGTLNHVEVHPREI+REAIK+NASA+ILAHNHPSGCAEPSKADK Sbjct: 125 IFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADK 184 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 LITER+IK CQFMD+RVLDH++IGRGEYVSFAERGWI Sbjct: 185 LITERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 221 >UniRef50_A4W511 UPF0758 protein Ent638_0101 n=3 Tax=Enterobacteriaceae RepID=Y101_ENT38 Length = 221 Score = 278 bits (711), Expect = 1e-73, Method: Composition-based stats. Identities = 160/220 (72%), Positives = 194/220 (88%) Query: 3 NNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSE 62 ++ L+PREKML FGI++LTD ELLALFLRTGT GK V LA+E+L++FGSL+GLL + Sbjct: 2 DDELTLLPREKMLSFGITSLTDAELLALFLRTGTSGKSVFVLAQELLQHFGSLHGLLNAN 61 Query: 63 YEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREI 122 ++F V GIG+AK+AQLKGIAELARRY++VR+ ++PLLSPEMT++FLQSQL+ ERE+ Sbjct: 62 LDEFRYVEGIGLAKYAQLKGIAELARRYHSVRVLGDNPLLSPEMTKDFLQSQLSDAEREV 121 Query: 123 FMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSK 182 FMVIFLD+QHRV+ H R+FSGTL HVEVHPREI+REAIK+NA+A+ILAHNHPSGCAEPSK Sbjct: 122 FMVIFLDNQHRVVKHSRMFSGTLRHVEVHPREIVREAIKVNAAAVILAHNHPSGCAEPSK 181 Query: 183 ADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ADK ITERIIK CQFMD+ VLDH +IGRGEYVSFAE+GWI Sbjct: 182 ADKDITERIIKCCQFMDIHVLDHFIIGRGEYVSFAEQGWI 221 >UniRef50_A7MQ95 UPF0758 protein ESA_04094 n=32 Tax=Bacteria RepID=Y4094_ENTS8 Length = 230 Score = 277 bits (708), Expect = 2e-73, Method: Composition-based stats. Identities = 142/213 (66%), Positives = 183/213 (85%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PREK++++G + L+D ELLA+FLRTGT G DV+TLAK +L +FGSLYGLL+++ F + Sbjct: 18 PREKLMRYGAADLSDEELLAIFLRTGTPGMDVMTLAKRLLAHFGSLYGLLSADIRPFRDI 77 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+G+AK+AQLK I ELARRYY R EE+ LLSP +TR+FL+SQL +ERE+F+VIFLD Sbjct: 78 GGVGMAKYAQLKAIGELARRYYRSRPCEETALLSPTITRDFLESQLAEQEREVFLVIFLD 137 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 SQ+R+I LF+GTL+HVEVHPREI+REA+++NA+ +ILAHNHPSG AEPS+ADK++TE Sbjct: 138 SQNRIIRQNTLFTGTLSHVEVHPREIVREAVRLNAAGIILAHNHPSGRAEPSRADKMVTE 197 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 RI+KSCQ +D+RVLDH+VIGRGEYVSFAERGWI Sbjct: 198 RIVKSCQLVDIRVLDHLVIGRGEYVSFAERGWI 230 >UniRef50_B0UUW7 UPF0758 protein HSM_0009 n=10 Tax=Pasteurellaceae RepID=Y009_HAES2 Length = 222 Score = 272 bits (696), Expect = 7e-72, Method: Composition-based stats. Identities = 106/222 (47%), Positives = 155/222 (69%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 M + LMPREK+LK+G S+L D ELLA+FLRTG + V+ L++ +L +F SL GL+ Sbjct: 1 MTQQNTTLMPREKLLKYGASSLDDKELLAIFLRTGIKNCPVMQLSELVLAHFSSLRGLIN 60 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 ++ + F + G+G+ +F QL+ E+ +RY ++ SP+ R +LQ++L ++R Sbjct: 61 ADQKHFCQMKGLGITQFVQLQACTEMTKRYLLQELQFAQEFTSPDTVRMYLQTELENKDR 120 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 EIFMV+FLD+QHR+I +F GT+N V+PREII+ A+ NA+ALILAHNHPSG + P Sbjct: 121 EIFMVLFLDNQHRLIKKEEMFLGTINQANVYPREIIKTALFCNAAALILAHNHPSGVSTP 180 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S AD+ +TE I + + M++RVLDH +IG+G Y SFAE+GWI Sbjct: 181 SMADRKMTENIKQLSELMEIRVLDHFIIGKGNYFSFAEQGWI 222 >UniRef50_B2UAP0 UPF0758 protein Rpic_2712 n=3 Tax=Burkholderiaceae RepID=Y2712_RALPJ Length = 224 Score = 258 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 90/220 (40%), Positives = 135/220 (61%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 + + PREK+L G +AL+D ELLA+FLR G GK + LA+E+L +FGSL L Sbjct: 3 IVDWPAHERPREKLLAHGPAALSDAELLAIFLRVGVPGKSAVDLARELLAHFGSLARLCH 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + ++FS ++G+G AK+AQL + E+ARR + S + ++FL+ L Sbjct: 63 ASQQEFSSINGMGPAKYAQLHALLEVARRALKEDFTQGQTFESAQSVKDFLRLTLGHRPH 122 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E+F FLD +HR+I LF GTL V+PREI + A+ NA+A+ILAHNHP+G EP Sbjct: 123 EVFACFFLDVRHRLIAWEELFRGTLTEARVYPREIAKRALHHNAAAVILAHNHPTGNTEP 182 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 S++D ++T + ++ +D+ VLDH+++GR F E G Sbjct: 183 SESDVILTRELCRALAMLDVIVLDHMIVGRNHVYGFLEHG 222 >UniRef50_A5UDB6 UPF0758 protein CGSHiEE_07200 n=30 Tax=Gammaproteobacteria RepID=Y7200_HAEIE Length = 221 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 109/220 (49%), Positives = 156/220 (70%) Query: 3 NNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSE 62 N+ LMPREK+L G AL+D ELLA+FLRTG +G V++L+K +L +FGSL+ LL+S+ Sbjct: 2 ENNDDLMPREKLLASGAKALSDYELLAIFLRTGIKGCPVISLSKNVLTHFGSLHALLSSD 61 Query: 63 YEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREI 122 + F V G+G+ +F QL+ I E+ +RY M + PE + FL ++L EERE+ Sbjct: 62 KKAFCSVKGLGITQFIQLQAITEMTKRYLKQEMLSTPIINDPETVKLFLLTELQHEEREV 121 Query: 123 FMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSK 182 FMV+FLD+QHR+I RLF GT+N V+PREII+EA+ NA+ALILAHNHPSG EPS Sbjct: 122 FMVLFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGVTEPSY 181 Query: 183 ADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +D+LIT++I + + M++ VLDH+++G+ + SFAE + Sbjct: 182 SDQLITKKIQDAAELMEICVLDHLIVGKSDCYSFAENCLL 221 >UniRef50_Q31EB6 UPF0758 protein Tcr_1917 n=5 Tax=Gammaproteobacteria RepID=Y1917_THICR Length = 225 Score = 257 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 89/223 (39%), Positives = 143/223 (64%), Gaps = 1/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 + + + PREK+LKFG L+D ELLA+FLR G +GK + LA+++L++FGSL LL Sbjct: 3 ITDWHENDRPREKLLKFGAPHLSDAELLAIFLRVGVKGKSAVELAQDLLDHFGSLERLLN 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 ++ F G+G AK+ QLK + E++RR++ +++ L PE LQ + + R Sbjct: 63 ADEAAFCEAKGLGQAKYVQLKAVLEMSRRHFESGLKKGEALTQPEKVARLLQHHIGHQSR 122 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 EIF ++ LD Q++ I LF+GT+N VH RE+++ + +A+A+ILAHNHPSG P Sbjct: 123 EIFGLVLLDQQNQFIQFVPLFTGTINQATVHIREVLKTVLDHHAAAVILAHNHPSGDPTP 182 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGR-GEYVSFAERGWI 222 S++D+ +T +I + Q ++ R LDHI++G G + SF ++G + Sbjct: 183 SQSDRDLTHQIQQGLQLIETRCLDHIILGDHGRWYSFTQQGIL 225 >UniRef50_A9VIS8 UPF0758 protein BcerKBAB4_4299 n=107 Tax=Firmicutes RepID=Y4299_BACWK Length = 225 Score = 257 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 78/222 (35%), Positives = 139/222 (62%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +++ + PRE++L G +L++ ELLA+ LRTG++ + VLTL+ +L +F L L Sbjct: 4 IRDVVREEQPRERLLLEGAGSLSNRELLAVLLRTGSKEETVLTLSDNILHHFDGLRMLKD 63 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + E+ +HG+G+AK +QL EL RR + + + SPE ++ ++ ++ Sbjct: 64 ATLEEMMSIHGVGIAKASQLMAAFELGRRMVRLEYQNRYSIRSPEDCASYMMEEMRFLQQ 123 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+ ++L+++++VI + +F G+LN VHPRE+ +EA + A+++I HNHPSG P Sbjct: 124 EHFVCLYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPAP 183 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S+ D +T+R+++ + + + VLDHI+IG ++VS E+G I Sbjct: 184 SREDIEVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225 >UniRef50_B3E339 UPF0758 protein Glov_0523 n=8 Tax=Desulfuromonadales RepID=Y523_GEOLS Length = 230 Score = 256 bits (655), Expect = 3e-67, Method: Composition-based stats. Identities = 86/225 (38%), Positives = 133/225 (59%), Gaps = 3/225 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTG--TRGKDVLTLAKEMLENF-GSLYG 57 +K+ + PREK+LK G +AL+D ELLAL LRTG GK + L +E+LE F G+L Sbjct: 6 IKDWPEDERPREKLLKRGAAALSDAELLALVLRTGDAAAGKSAIDLGRELLERFDGNLRE 65 Query: 58 LLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTG 117 L +E + + G+G+AK A +K L +R+ R+ SP +F +L Sbjct: 66 LAQAELNELQQIKGLGLAKAASIKAAFTLGKRFQARRLETLERFTSPAQVFDFFHHELRD 125 Query: 118 EEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGC 177 +E+F+ + LD ++R+ ++ G+LN VHPRE+ A++ +A+A+I HNHPSG Sbjct: 126 NRKELFLTLLLDGKNRITRKVQVSEGSLNQSIVHPREVFAPAVRESAAAVIFIHNHPSGD 185 Query: 178 AEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS+ D IT R+ ++ + + ++VLDHI+IG G Y SF E G + Sbjct: 186 PAPSREDHEITRRLNEAGEILGIKVLDHIIIGDGAYFSFVESGLL 230 >UniRef50_A1SR15 UPF0758 protein Ping_0056 n=2 Tax=Gammaproteobacteria RepID=Y056_PSYIN Length = 225 Score = 256 bits (655), Expect = 3e-67, Method: Composition-based stats. Identities = 97/222 (43%), Positives = 145/222 (65%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K+ PREK+L+ G +AL+D ELLA+FLRTG RG DV+TL+K++L FGSL+ L Sbjct: 4 LKDWPNQERPREKLLQKGTAALSDAELLAIFLRTGCRGVDVVTLSKQLLSQFGSLHALFA 63 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + F G+G AK+ QL+ + E++ RY + + + L S T+ FL +++ Sbjct: 64 ASESDFCEKKGLGQAKYVQLQAVLEMSSRYLQEPLSKGNALTSAAQTKAFLIAKMHNLPY 123 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E+F I LD+QHR+I F G+++ VHPR I ++ + NA+A+IL HNHPSG Sbjct: 124 EVFAAILLDTQHRIIRFHEFFFGSIDCATVHPRIIAQKVLSENAAAIILVHNHPSGDPSA 183 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S+ADK+IT++I+ + Q +D+RVLDH+V+G + SFAE GWI Sbjct: 184 SEADKMITQKIVSALQLIDVRVLDHLVVGHKKCTSFAENGWI 225 >UniRef50_Q46XP0 UPF0758 protein Reut_A2732 n=12 Tax=Proteobacteria RepID=Y2732_RALEJ Length = 228 Score = 255 bits (651), Expect = 9e-67, Method: Composition-based stats. Identities = 91/222 (40%), Positives = 138/222 (62%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 + N PREK+ + G +AL+D ELLA+FLR G GK + LA++++ FGSL L T Sbjct: 3 ITNWPACERPREKLQECGAAALSDAELLAVFLRVGATGKSAVELARDLMVRFGSLTRLFT 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 ++ G+ G+G AK+ QL+ + ELARR + S L SP R +L+ L + Sbjct: 63 ADARAVLGIRGMGEAKYTQLQAVPELARRMLAESLELPSGLDSPAAVRSYLRLTLAPLAQ 122 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E+F+ +FLD+++R+I LF GTLN V+PRE+ R A+ NA+++I+AHNHPSGC P Sbjct: 123 EVFVCLFLDTRNRMIASEELFRGTLNQTAVYPREVARRALAHNAASVIVAHNHPSGCCTP 182 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S++D +T + ++ +D+R+LDH V+ SFAE G + Sbjct: 183 SQSDLQMTRMLARALDLIDVRLLDHFVVAGTHVHSFAEHGEL 224 >UniRef50_Q3A8G4 UPF0758 protein Pcar_0065 n=2 Tax=Bacteria RepID=Y065_PELCD Length = 227 Score = 255 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 81/224 (36%), Positives = 129/224 (57%), Gaps = 2/224 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTR--GKDVLTLAKEMLENFGSLYGL 58 +K+ + PREK+L G AL+D ELLAL LR+G G L + +++ F +L + Sbjct: 4 IKDWPEDERPREKLLHRGAEALSDAELLALILRSGDAASGHSALDQGRLLIQQFDTLRQM 63 Query: 59 LTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGE 118 T+ + + GIG AK A+L+ + ELARR+ +R SP+ +L Sbjct: 64 ATATTSELQAIKGIGPAKAAELQAVFELARRFGRNPLRPGDRYTSPQAVFAHFHERLRDH 123 Query: 119 EREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCA 178 +RE F+ + LDS++R++ + G+L VHPR++ ++ +A+A++ HNHPSG Sbjct: 124 KRERFIALLLDSKNRLLREVGISEGSLTASIVHPRDVFAPVVRESAAAVLFVHNHPSGDP 183 Query: 179 EPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS+ D IT+R+ + + M +RVLDHI+IG YVS A+RG + Sbjct: 184 SPSREDLDITQRLREVGELMGVRVLDHIIIGDEGYVSLADRGVL 227 >UniRef50_B2FJW1 UPF0758 protein Smlt0399 n=129 Tax=Proteobacteria RepID=Y399_STRMK Length = 234 Score = 254 bits (650), Expect = 1e-66, Method: Composition-based stats. Identities = 93/223 (41%), Positives = 140/223 (62%), Gaps = 1/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 + + + PREK++ G +AL+D ELLALFL +G G+D + A+++L+ G L LL Sbjct: 3 IHDWPEQERPREKLIARGPTALSDAELLALFLGSGFGGRDAVQTARDLLQAHGPLRVLLD 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMRE-ESPLLSPEMTREFLQSQLTGEE 119 + + + G+G A+ L ELA RY + E+ +P +LQ +L G+ Sbjct: 63 RPAAELARLPGLGPARSCTLAAGLELAHRYLAAELEHGEAVGNNPAAVGRYLQHRLRGQA 122 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 RE+FM +FLD++HR+I LF GT+N V+PRE++R A+ NA+A+IL+HNHPSG E Sbjct: 123 REVFMALFLDNRHRLIACEELFHGTINAAPVYPREVVRRALLHNAAAVILSHNHPSGDPE 182 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS AD IT+ + ++ +D+R+LDH V+G G VSFAERG + Sbjct: 183 PSSADTRITDELQQALAMVDVRLLDHFVVGEGRPVSFAERGLL 225 >UniRef50_B5YIR9 DNA repair protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR9_THEYD Length = 224 Score = 253 bits (648), Expect = 2e-66, Method: Composition-based stats. Identities = 84/222 (37%), Positives = 140/222 (63%), Gaps = 1/222 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 ++ + PRE+++K G AL+D +LLA+ LRTG+ GK V+ A E+L+NF L GL Sbjct: 4 VREWPETERPRERLIKHGAEALSDAQLLAIVLRTGSNGKTVIDTAIELLQNFRGLRGLEE 63 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + G+G+AK AQ+K EL +R + +E+ S E+ + +L G ++ Sbjct: 64 ASISELKSFKGLGIAKIAQIKASFELGKRALCEKSQEQ-FFNSAEIVYNYFFPKLNGLKK 122 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E+F+ + LD++ R+I ++ GTLN +HPRE+ ++A+K +A A+IL HNHPSG P Sbjct: 123 EVFITLLLDTKLRLIREVKVSEGTLNQSLIHPREVFKDAVKESAYAVILIHNHPSGDPTP 182 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S+ D IT+++ K+ + +++ +LDH++IG G+Y S ERG + Sbjct: 183 SEQDIEITKKLKKASEILEIPILDHVIIGSGKYFSMKERGVV 224 >UniRef50_C9L5T8 DNA repair protein RadC n=4 Tax=Clostridiales RepID=C9L5T8_RUMHA Length = 231 Score = 251 bits (641), Expect = 1e-65, Method: Composition-based stats. Identities = 78/224 (34%), Positives = 125/224 (55%), Gaps = 3/224 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLE---NFGSLYG 57 + + P EK L+ G LTD ELLA+ LRTGT+G + +A+E+L+ + L G Sbjct: 7 INQMPEEDRPYEKCLRMGAECLTDSELLAVLLRTGTKGSPSVEMAEEVLKLSKDKEGLLG 66 Query: 58 LLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTG 117 L Q V GIG K Q+K I EL++R ++ P ++ QL Sbjct: 67 LHQLSLAQLQAVKGIGKVKAIQIKCIGELSKRIATATAKKGLSFRHPASIADYYMEQLRH 126 Query: 118 EEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGC 177 EE+E+ + + LD+++ ++ +F GT+N +PREI A+ +A ++L HNHPSG Sbjct: 127 EEQELLICMMLDTKNHLLGDEMIFKGTVNSSLANPREIFLSAVSYHAVGILLVHNHPSGD 186 Query: 178 AEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 PS+AD T+R+ ++ + + + +LDHI+IG +Y+SF E+G Sbjct: 187 CTPSQADVDFTQRVKEAGELLGIPLLDHIIIGDCKYLSFREQGI 230 >UniRef50_D1JB12 Probable DNA repair protein radC homolog n=2 Tax=uncultured archaeon RepID=D1JB12_9ARCH Length = 330 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 90/222 (40%), Positives = 134/222 (60%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K + PREK+L +G S LT ELLA+FLR+G GK + +A ++L FG + G+ Sbjct: 90 LKRLRKEERPREKLLTYGSSKLTTSELLAIFLRSGIPGKSAIVIANDLLTQFGGVKGIFE 149 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 ++ + + G+G AK AQ+K + LA Y M+ S + + + ++L + + Sbjct: 150 ADKAKLMDIEGVGAAKVAQIKAVQALAEEYLKESMKSVSKVRNSKEVFDYLYLTMRDLKI 209 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 EIF VIFLDS ++ I LF GTLN V+PREI++ A+ NA++LI HNHPSG P Sbjct: 210 EIFKVIFLDSANQTIDDENLFEGTLNASSVYPREIVKSAVNKNAASLIFVHNHPSGDPTP 269 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S +D+ ITE +I +C + + VLDHI+IG Y SFA+ G + Sbjct: 270 SGSDRAITEDLIYACNLVQITVLDHIIIGDNVYFSFADEGLL 311 >UniRef50_D0MFA0 DNA repair protein RadC n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MFA0_RHOM4 Length = 245 Score = 249 bits (636), Expect = 6e-65, Method: Composition-based stats. Identities = 74/226 (32%), Positives = 118/226 (52%), Gaps = 4/226 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGK----DVLTLAKEMLENFGSLY 56 + + PREK+++ G SAL+D EL+AL +GTR K + L + ++ +GSLY Sbjct: 19 INQWDEADRPREKLMRRGPSALSDAELIALIFGSGTRTKQGSISAVQLGQALIRAYGSLY 78 Query: 57 GLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLT 116 L + ++ + V G+G AK QL E+ RR R + +P L Sbjct: 79 ALAQRDLKELTRVAGVGPAKAVQLVAAFEIGRRVEAQRPGRRIQVRTPADVAACYGPLLR 138 Query: 117 GEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSG 176 +RE+F ++ L++ + +I + G L V PR + + AI NA+ +I HNHPSG Sbjct: 139 DLKREVFKIVLLNTANYIIADYTISEGGLAASIVEPRAVFQRAILDNAAGIICLHNHPSG 198 Query: 177 CAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 EPS D IT +++++ + + + V DHI+I Y S AERG + Sbjct: 199 NPEPSAEDIRITRQLVEAGRLLGIPVHDHIIIAGTTYTSLAERGLM 244 >UniRef50_A5ZRS6 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5ZRS6_9FIRM Length = 236 Score = 247 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 89/227 (39%), Positives = 129/227 (56%), Gaps = 5/227 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLEN-----FGSL 55 MK + P EK ++ G + L+D ELLA+ LR GTRG + LTLA ++L + + L Sbjct: 5 MKEIPESQRPYEKCIREGENTLSDSELLAVILRCGTRGMNSLTLANDILSHMEQSPYPGL 64 Query: 56 YGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQL 115 GLL +HGIG K QLK I EL++R + R SP+ + QL Sbjct: 65 LGLLHCSVSDLKKIHGIGTVKAVQLKCIGELSKRIASTAARISLDFNSPDSIAAYYMEQL 124 Query: 116 TGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPS 175 +E+EI + + LD+Q+ ++ L GT+N + PRE+ EA++ +A LIL HNHP Sbjct: 125 RHQEQEIMICMMLDNQNHLLGDTMLSKGTVNATLITPREVYLEALRYHAVNLILIHNHPG 184 Query: 176 GCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 G PSK DK ITERI ++ + + + +LDHI+IG Y+SF E G + Sbjct: 185 GNPAPSKCDKEITERICQAGEMLGINLLDHIIIGDHRYISFREEGLM 231 >UniRef50_C7GE95 DNA repair protein RadC n=2 Tax=Roseburia RepID=C7GE95_9FIRM Length = 243 Score = 246 bits (628), Expect = 5e-64, Method: Composition-based stats. Identities = 76/223 (34%), Positives = 117/223 (52%), Gaps = 1/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLEN-FGSLYGLL 59 +K P EK L +G L+D ELLA+ +R+GT G + +A+ +L + +L L Sbjct: 19 VKELPDSEKPYEKFLTYGPEYLSDAELLAVIIRSGTSGLKSVEVAQNLLNDGHRNLLNLY 78 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 +E+ + GIG K QLK IAEL++R + + +P ++ L E Sbjct: 79 DIPFEKMQKIRGIGPIKAIQLKCIAELSKRIAQTKSAPNVCMTNPRTIADYYMEHLRHEN 138 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 +E +V D++ + + L G+ N V PRE+ AI +A+ LIL HNHPSG E Sbjct: 139 KEHLIVCMFDNKCHMKGDKLLSVGSANETIVSPREVFETAINCHAAHLILVHNHPSGIPE 198 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS AD ++T+RI+ Q M + + DH++IG Y S+ E I Sbjct: 199 PSHADDVVTKRILNCGQLMGIPLSDHVIIGDHSYFSYRENNRI 241 >UniRef50_Q1AVT6 UPF0758 protein Rxyl_1530 n=3 Tax=Bacteria RepID=Y1530_RUBXD Length = 227 Score = 245 bits (627), Expect = 6e-64, Method: Composition-based stats. Identities = 80/222 (36%), Positives = 126/222 (56%), Gaps = 1/222 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K L PRE++L G SAL+D ELL + G+R K + LA +++ G L+ L Sbjct: 7 IKQLPPELRPRERLLAGGASALSDAELLGVLFGIGSREKTAVELAGDVISGAGGLHNLFG 66 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + V GIG AK L ELARR R + SP L+ ++ +R Sbjct: 67 ASVHELKQVKGIGEAKACILLAALELARRLSVARNPGRPVISSPADVDGLLRGRIANLDR 126 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+V+ L++++ VI + GTL+ VHPRE+ + AI+ +A++++LAHNHPSG EP Sbjct: 127 EHFVVVLLNTKNEVIEAPTISVGTLSSSLVHPREVFKPAIRASAASVVLAHNHPSGRVEP 186 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S+ D+ +T R+ ++ + + VLDH+++G G Y S E G + Sbjct: 187 SREDREVTGRVAEAGGIIGIEVLDHVIVGEG-YFSMKEHGML 227 >UniRef50_B2A699 DNA repair protein RadC n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A699_NATTJ Length = 241 Score = 245 bits (626), Expect = 8e-64, Method: Composition-based stats. Identities = 75/222 (33%), Positives = 123/222 (55%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K+ + PRE+ LK G A++D EL+A+ L TGT+ L LA +L N+ S++ LL Sbjct: 20 IKSLPEADRPRERFLKLGPEAISDSELIAIILGTGTKQSSALDLANSILSNYVSIFNLLQ 79 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + + GIG AK +LK ELA R + SPE + +L E R Sbjct: 80 ATISELCEIPGIGYAKSIKLKAAFELANRCMAREQLTMDKITSPEDIFRLMNFRLKTETR 139 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+ + L+++ ++ + G+LN VHPRE+ AI+ +A +IL HNHPSG EP Sbjct: 140 EHFLAVMLNTKSYLLKIDLISIGSLNATIVHPREVFNRAIRASACGVILVHNHPSGDPEP 199 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S+ D +T R++ + + + ++DH++IG ++ SF+ + Sbjct: 200 SQDDIKLTNRLVAAGDLLGIPIMDHVIIGHQKFYSFSRENHL 241 >UniRef50_Q46A65 UPF0758 protein Mbar_A2303 n=2 Tax=Methanosarcinaceae RepID=Y2303_METBF Length = 229 Score = 245 bits (626), Expect = 8e-64, Method: Composition-based stats. Identities = 68/222 (30%), Positives = 136/222 (61%), Gaps = 1/222 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +++ + PRE++++ G +L++ ELL + LRTG+ ++V++L+ + + S+ L Sbjct: 8 IQDIPEEERPRERLIRNGPESLSNSELLGVILRTGSNKENVVSLSSRIFSEY-SIKQLSL 66 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + VHG+G AK AQ+ + ELARR + + SP+ + ++ +++ Sbjct: 67 ANVSRLMKVHGVGKAKAAQIAAVFELARRLETFVEEPKRKVCSPKDVYTLMYPKMREQKK 126 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+ + LD++++++ + G+LN VHPRE+ + A+ +++++I+ HNHPSG P Sbjct: 127 EKFITLCLDTKNQILKEEVVSIGSLNASIVHPREVFKSALMESSASVIMIHNHPSGDPSP 186 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S+ D ++TE++++ + + + VLDHI+IG G YVS + G++ Sbjct: 187 SREDIMVTEKMVEGGKLLGIDVLDHIIIGEGRYVSLKDEGFV 228 >UniRef50_C9Y8Q3 DNA repair protein radC homolog n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8Q3_9BURK Length = 239 Score = 245 bits (626), Expect = 9e-64, Method: Composition-based stats. Identities = 94/237 (39%), Positives = 142/237 (59%), Gaps = 15/237 (6%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLE---------- 50 +K+ PREK+L G AL+D ELLA+ LRTG GK VL +A+E+L+ Sbjct: 3 LKDLPLEAQPREKLLARGAGALSDAELLAILLRTGIAGKGVLQMAEELLQLKNDSASRTV 62 Query: 51 -----NFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPE 105 FG + GLL + + V G+G AK A++ + ELARR R++E P+ Sbjct: 63 DGRQGGFGGIAGLLHATADDLKHVKGLGPAKRAEIVAVLELARRAMAQRLQEREVFADPQ 122 Query: 106 MTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINAS 165 + +LQ L + E+F V+FLDSQ++++ LF GTL V+PRE++ A+ A+ Sbjct: 123 AVKHYLQLHLAAKGHEVFAVLFLDSQNKLLAMEELFRGTLTQTSVYPREVVIRALHHGAA 182 Query: 166 ALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 A++LAHNHPSG +PS+AD+ +T+ + + +D+RVLDHI++G G+ +S AE G I Sbjct: 183 AVVLAHNHPSGSVQPSRADEALTQTLKAALALVDVRVLDHIIVGPGQALSMAETGLI 239 >UniRef50_A5KLJ1 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5KLJ1_9FIRM Length = 233 Score = 245 bits (626), Expect = 9e-64, Method: Composition-based stats. Identities = 80/224 (35%), Positives = 124/224 (55%), Gaps = 3/224 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG---SLYG 57 +K + P EK KFG LTD ELLA+ +RTGT+G++ L L++++L G L G Sbjct: 7 IKEMYKEDRPYEKCEKFGAENLTDTELLAILIRTGTKGENSLELSRKLLYKNGFHNGLAG 66 Query: 58 LLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTG 117 + ++ + GIG K QL ++EL++R + SP ++ + Sbjct: 67 IHKWSLDELIQIKGIGKVKAIQLVCLSELSKRLARTSTVGKLDFSSPRTIADYYMEDMRH 126 Query: 118 EEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGC 177 REI +IFL+++ R+I + GT++ V PRE+ EA K NA +IL HNHP G Sbjct: 127 RTREILKLIFLNTRCRLIGECNVSEGTIDSALVSPRELFIEAFKRNAYGIILLHNHPGGD 186 Query: 178 AEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 PS+ D +IT RI ++ + + +R+ DHIVIG +VS E+G+ Sbjct: 187 PTPSREDVMITRRIYEAGELLGIRLFDHIVIGDNCFVSMKEKGF 230 >UniRef50_Q4UPP0 UPF0758 protein XC_3944 n=35 Tax=Proteobacteria RepID=Y3944_XANC8 Length = 225 Score = 245 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 86/222 (38%), Positives = 134/222 (60%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 + + PREK+L G + L+D ELLA+F+ +G RG+D + A+++L G L LL Sbjct: 3 INDWPTDERPREKLLARGAAVLSDAELLAIFVGSGLRGQDAVRTARDLLHRHGPLRCLLD 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + + G+G A +L ELA R+ + L P + +L Sbjct: 63 RPAKALARLPGLGPASACKLSAALELANRHLLSDLERGEALSDPSSVGRYFSQRLRARNY 122 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E+F +FLDS+HR I LF+GT++ E+HPRE++R A+ NA+A+++ HNHPSG EP Sbjct: 123 EVFAALFLDSRHRAIAFEELFTGTIDAAEIHPREVVRRALLHNAAAVVVGHNHPSGNPEP 182 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S+AD+ +T+R++++ +D+R+LDH VIG G VS AERGW+ Sbjct: 183 SEADRAVTQRLLQALGLVDIRLLDHFVIGDGRPVSLAERGWV 224 >UniRef50_A6TQH8 UPF0758 protein Amet_2289 n=54 Tax=cellular organisms RepID=Y2289_ALKMQ Length = 232 Score = 245 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 77/223 (34%), Positives = 122/223 (54%), Gaps = 1/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLE-NFGSLYGLL 59 +K PREK+L +G +L++ ELLA+ L TGT+ + LA +L + L L Sbjct: 10 IKKMPINERPREKLLNYGPESLSNPELLAIILSTGTKEMSAIDLATHVLSYSEEGLRHLK 69 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 E E+ + G+G+AK +Q+ EL +R + SP+ L ++ + Sbjct: 70 NCEIEELQQIKGVGIAKASQILAAVELGKRISLTSRVNHYRIKSPDDVSNLLMEEMRYLK 129 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 +E F + L+++H VI + G+LN VHPRE+ AIK ++SA+IL HNHPSG Sbjct: 130 KEYFNIALLNTKHEVIAIENISIGSLNASIVHPREVFVVAIKRSSSAIILVHNHPSGDPS 189 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS D IT+R++++ + + + VLDHI+IG Y S E+ + Sbjct: 190 PSGEDIRITKRLVEAGKLLGIEVLDHIIIGDNVYYSLKEKSMM 232 >UniRef50_Q6F7Z8 UPF0758 protein ACIAD3126 n=19 Tax=Proteobacteria RepID=Y3126_ACIAD Length = 271 Score = 243 bits (621), Expect = 3e-63, Method: Composition-based stats. Identities = 82/223 (36%), Positives = 140/223 (62%), Gaps = 1/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K + PRE++L G +L+D ELLA+FLRTG++ + LA+ M+++FG L + Sbjct: 20 IKFWPEQERPRERLLHSGPESLSDAELLAIFLRTGSKQHSAVELARLMIQHFGGLNPVFD 79 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLL-SPEMTREFLQSQLTGEE 119 + ++ S HGIG K+A L + EL RRY N +++ L S + ++L+ +L GE+ Sbjct: 80 ASLQELSHFHGIGTTKYAHLMAVKELGRRYLNHYFHQDALNLNSSRLVLDYLRYELLGEK 139 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 +E+F V+ LDS+ R + ++LF G+LN + +R A++ +A +++AHNHP G AE Sbjct: 140 QEVFAVLCLDSELRKLNFKKLFYGSLNACNISINHTLRYALQQHACHIVIAHNHPFGKAE 199 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS AD +T ++ ++CQ +++++LDH +I + SFAER + Sbjct: 200 PSAADLDLTHQLYQACQLVEIKLLDHFIIAKDGTFSFAERALL 242 >UniRef50_B2V090 UPF0758 protein CLH_0547 n=18 Tax=Clostridium RepID=Y547_CLOBA Length = 229 Score = 242 bits (619), Expect = 5e-63, Method: Composition-based stats. Identities = 82/223 (36%), Positives = 139/223 (62%), Gaps = 1/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K+ + P+EK+L +G L + ELLA+ LRTGT+G++VL L+ +L F L G+L Sbjct: 7 IKDIPKNERPKEKLLSYGADTLNNSELLAIILRTGTKGENVLQLSNRLLSEFQGLDGILE 66 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVR-MREESPLLSPEMTREFLQSQLTGEE 119 + + + + GI K +Q+ +AEL RR+ + + ++SP + +++ + Sbjct: 67 ASLDDITSIKGIKEGKASQILALAELFRRFRTFKSADRDIKIMSPNDIAMLINGEMSLLK 126 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 +EI VIFL++++ VI + +F G+LN VHPREI +EA+ +++ +I+ HNHPSG Sbjct: 127 QEILKVIFLNTKNIVIGTKDVFKGSLNTSIVHPREIFKEAVNKSSTKIIICHNHPSGDPT 186 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PSK D IT RI + + M +++LDHI+IG+ ++S E+G+I Sbjct: 187 PSKEDINITLRIKECGEIMGIQLLDHIIIGKNGFISLKEKGFI 229 >UniRef50_Q82ZX1 UPF0758 protein EF_2926 n=40 Tax=Firmicutes RepID=Y2926_ENTFA Length = 232 Score = 242 bits (618), Expect = 7e-63, Method: Composition-based stats. Identities = 74/221 (33%), Positives = 128/221 (57%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 ++ +PRE++L G AL++ ELLA+ LRTG++ DV+T+A +L+ F L L Sbjct: 8 IREMPSDCLPRERLLAIGEKALSNQELLAILLRTGSKEADVMTVAATLLKQFKQLSYLQQ 67 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + + GIG K +L+ EL R Y + + S + + L ++ G ++ Sbjct: 68 ATLNELMAIKGIGQVKAIELRAAIELGCRIYQSSQIKFGKVTSSQQVAQRLLQEMKGLQQ 127 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E + I+L++++ +I + +F G+LN HPREI REA+K +++ ++LAHNHPSG P Sbjct: 128 EHLICIYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTP 187 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 S D T+R+ + + M +++LDHI++G Y+S E + Sbjct: 188 SPQDIQFTKRMEECGEMMGIQLLDHIILGDSGYISLREENF 228 >UniRef50_Q4FQM6 UPF0758 protein Psyc_1834 n=3 Tax=Moraxellaceae RepID=Y1834_PSYA2 Length = 227 Score = 242 bits (618), Expect = 7e-63, Method: Composition-based stats. Identities = 87/221 (39%), Positives = 138/221 (62%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K+ + PREK+LKFG + L+D E+LA+FLRTGT+ + + LA+ ++E FGSL LL Sbjct: 3 IKDWHEDDRPREKLLKFGAAHLSDAEILAIFLRTGTQSQSAIDLARHLIEQFGSLAELLA 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + E HGIG AK+AQ+ E+ RRY + +++ L +M ++++ + L GE R Sbjct: 63 APQETVLACHGIGPAKYAQILASLEIGRRYLDSQLKTGQGLGRSQMVKDYISTHLRGEPR 122 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E+F V+ LD+ +I LF+G ++ V + ++R A+ S LI+AHNHP A P Sbjct: 123 EVFAVLCLDNALNLINFEILFTGGISSCSVCIKHVLRHALSHATSQLIIAHNHPHTDATP 182 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 S AD L+T + K+C +DL ++DH+++GR E +S+AE Sbjct: 183 STADNLLTYELKKACDLIDLSLIDHVIVGRNETLSYAENCL 223 >UniRef50_C6LCB9 DNA repair protein RadC n=3 Tax=Clostridiales RepID=C6LCB9_9FIRM Length = 231 Score = 242 bits (618), Expect = 8e-63, Method: Composition-based stats. Identities = 75/225 (33%), Positives = 119/225 (52%), Gaps = 3/225 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEML---ENFGSLYG 57 MK P EK LK G L+D ELLA+ LRTG +G + LA+E+L + L G Sbjct: 6 MKQLPDDERPYEKCLKCGAGVLSDAELLAVILRTGAKGMTSVELAREILSFPKPQPGLSG 65 Query: 58 LLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTG 117 L + G+G K Q++ I EL+RR E + S + ++ Sbjct: 66 LYHLSASALCDIKGVGKVKAVQIQCITELSRRIAKSVASEGNTFTSAQAIADYYMEDFRH 125 Query: 118 EEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGC 177 ++E ++ D++ +++ + + GT+N V PREI EA+ A +IL HNHPSG Sbjct: 126 LQQERVFLLSFDTKGELLSEKTISVGTVNQSCVSPREIFLEALSCRAVYVILLHNHPSGN 185 Query: 178 AEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +PS D+L+T R+ +S + +++ ++DHI++G Y SF E G+I Sbjct: 186 PQPSPEDRLLTMRVHESGKLLEIPLMDHIILGDRRYFSFREEGFI 230 >UniRef50_C4Z083 DNA repair protein RadC n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z083_EUBE2 Length = 230 Score = 241 bits (617), Expect = 9e-63, Method: Composition-based stats. Identities = 76/219 (34%), Positives = 122/219 (55%) Query: 4 NSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEY 63 + L+P EK L+ G +L + ELLA +RTGT G + LA+++LE+ G+L GL Sbjct: 11 KEEKLLPYEKCLQHGAMSLDNAELLAAIIRTGTNGLSSIQLAEKLLESAGNLKGLYDMSV 70 Query: 64 EQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIF 123 + + GIG AK Q+ I EL+RR + RE + E + + E+E Sbjct: 71 SELMQIKGIGKAKAVQICCILELSRRIAKQKARERLDFSNAETIAGYYMEDMRHLEKEHL 130 Query: 124 MVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKA 183 +++ LD++ R+I + L GT V REI +EA+ A++++L HNHPSG PS+ Sbjct: 131 VLVMLDNRCRLIRDKVLSVGTSTGSMVSVREIFKEALDNRAASVVLLHNHPSGNPSPSRE 190 Query: 184 DKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 D +T ++++ + + + +LDHIVIG Y SF + +I Sbjct: 191 DMKVTRSVMEAGKIIGIELLDHIVIGDNSYFSFKQMQYI 229 >UniRef50_A8R890 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R890_9FIRM Length = 227 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 86/222 (38%), Positives = 134/222 (60%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K PREK L GI AL++ EL+AL LR GTR + VL LA E+L + SL L Sbjct: 3 VKEMQLHQRPREKALMHGIEALSNRELIALLLRNGTRSQSVLELADEVLNRYSSLGSLGQ 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + + GI AK +L+ L +R ++E + SP+ E+L Q+ +++ Sbjct: 63 ASLTELMEIDGIKQAKAIELQAAFALGKRIAFDVLKESEAISSPQKLSEWLMQQIGFQQQ 122 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+V+FL+ +++++ ++ LF GTL VHPREI +EA++I + +I AHNHPSG + Sbjct: 123 EHFLVVFLNQRNQILAYKTLFVGTLTSANVHPREIFKEAMRIGCAKIICAHNHPSGNPQV 182 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S AD IT++I++ Q + + +LDHIV+G YVS E G++ Sbjct: 183 SDADIAITQQIMECGQLVSIPLLDHIVVGGNRYVSLREEGYM 224 >UniRef50_Q21TE2 UPF0758 protein Rfer_3252 n=12 Tax=cellular organisms RepID=Y3252_RHOFD Length = 234 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 92/232 (39%), Positives = 145/232 (62%), Gaps = 10/232 (4%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLE---------- 50 +K+ PREK+L G AL+DVELLA+ LRTG +GK VL +A+E+LE Sbjct: 3 LKDLPPDARPREKLLARGPGALSDVELLAVLLRTGIKGKGVLQMARELLELKKSGSDDND 62 Query: 51 NFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREF 110 F + GLL + + + G+G AK A+L + EL+RR +++E + +P+ + + Sbjct: 63 GFDGIAGLLHATSDDLKRIKGLGPAKRAELVAVLELSRRALAQQLKERTIFATPDAVKHY 122 Query: 111 LQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILA 170 LQ L + E+F V+FLD Q+R++ LF GTL V+PRE++ A+ AS+++LA Sbjct: 123 LQLHLAAKPHEVFAVLFLDVQNRLLALEELFRGTLTQTSVYPREVVLRALHHQASSVVLA 182 Query: 171 HNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 HNHPSG +PS+AD+++T+ + + +D+RVLDH+++ GE +S AERG + Sbjct: 183 HNHPSGTVQPSRADEMLTQTLKTTLALIDVRVLDHVIVAPGEALSMAERGLL 234 >UniRef50_D1R5B1 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5B1_9CHLA Length = 238 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 76/219 (34%), Positives = 119/219 (54%) Query: 3 NNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSE 62 + PRE++L+ G L+ VEL+A+ L +G +G +L L++E++ FGSL L + Sbjct: 12 SLPAAERPRERLLQHGADVLSSVELIAVLLGSGMKGMPILQLSQEIMSRFGSLQNLADAT 71 Query: 63 YEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREI 122 E+ + G+G AK QLK L +R ++ + + +P ++ L +E Sbjct: 72 IEELCQIKGLGTAKAIQLKAALNLGKRLSRTQVSAKFQIRTPLHAYHLVKDDLEKAMQEH 131 Query: 123 FMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSK 182 F+ I D + VI + GTL VHPRE+ AI+ A++LIL HNHPSG PSK Sbjct: 132 FLTILQDVKGYVICSPTVALGTLTATVVHPREVFYPAIRHRAASLILVHNHPSGDPTPSK 191 Query: 183 ADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 D +T+ ++ + + + V DHI+IGR YVS E G+ Sbjct: 192 EDLDVTKTLVAVGRLVGICVNDHIIIGRDRYVSLREEGF 230 >UniRef50_A5IM26 UPF0758 protein Tpet_1235 n=7 Tax=Thermotogaceae RepID=Y1235_THEP1 Length = 222 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 90/223 (40%), Positives = 134/223 (60%), Gaps = 2/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENF-GSLYGLL 59 MK + L+PRE+M+K G +L+ EL+A+ LRTG +GK VL L+K++LE F GSL L Sbjct: 1 MKRDGGSLLPRERMIKAGPESLSVEELVAIVLRTGKKGKHVLELSKDLLERFDGSLIKLS 60 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 + E+ + V G+G+ K LK EL +R + R L S + Q ++ E Sbjct: 61 NAGLEEIASVEGVGMVKAITLKAALELGKRLHRELERIPEKLDSSVKVYRYCQ-EMVYLE 119 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 REI VI LD++ VI L GT + +HPR++ R AI+ NAS +I+ HNHPSG Sbjct: 120 REIVKVICLDTKLNVIGENTLTVGTSDRSLIHPRDVFRTAIRANASGVIVVHNHPSGDPT 179 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PSK D+LITER+ ++ + + + ++DH+++ R Y SF E G + Sbjct: 180 PSKEDRLITERLKQAGEILGVSLVDHVIVSRRGYFSFREEGEL 222 >UniRef50_A5FRP1 DNA repair protein RadC n=6 Tax=cellular organisms RepID=A5FRP1_DEHSB Length = 228 Score = 239 bits (611), Expect = 4e-62, Method: Composition-based stats. Identities = 77/222 (34%), Positives = 127/222 (57%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +++ PRE++ G AL+ VELLA+ L G G+ VL A+ ++ +FG G+ Sbjct: 7 IRDLPLAERPRERLQSLGAGALSSVELLAVILGRGVAGEPVLQSAQRLIAHFGGPSGIAC 66 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + E+ S + GIG+AK QLK ELA+R ++ + + +PE + + + E++ Sbjct: 67 ASVEELSKLKGIGLAKACQLKAAFELAKRAGGIKGEYQPCIKTPEDVFQIIYPLVCDEKK 126 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F + LD + R+I + G+L VHPRE+ +EA+ +A+++ILAHNHPSG EP Sbjct: 127 EYFFCLMLDVKSRLIRVGHISVGSLEESVVHPREVFKEALSASAASVILAHNHPSGDTEP 186 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S D ++ R+ ++ M + VLDHI+IG + S +G + Sbjct: 187 SHDDIGLSARLREAGGIMGIEVLDHIIIGGQSFTSLKRQGLL 228 >UniRef50_Q2S042 UPF0758 protein SRU_2338 n=1 Tax=Salinibacter ruber DSM 13855 RepID=Y2338_SALRD Length = 233 Score = 239 bits (610), Expect = 6e-62, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 122/227 (53%), Gaps = 5/227 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKD----VLTLAKEMLENFGSLY 56 + + PREK+L G + L+D E+LAL L +GTR D + L + +L+++GSL+ Sbjct: 6 IHEWDESDQPREKLLTHGPTVLSDAEVLALLLGSGTRTSDGPVSAVELGRALLQSYGSLH 65 Query: 57 GLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMR-EESPLLSPEMTREFLQSQL 115 + + ++ + G+G AK +L E RR + R + E + P + L Sbjct: 66 EVSQRKPKELTRTRGVGPAKATKLAAAFEAGRRVESQRQQDERMQVTCPADVADVYGPLL 125 Query: 116 TGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPS 175 ++E+F V+ L++ + +I + G L+ V PR + +AI +A+A+I HNHPS Sbjct: 126 RDLDKEVFKVVHLNTANVIIGDYTVSEGGLSSSVVEPRGVFEQAILDDAAAVICLHNHPS 185 Query: 176 GCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 G EPS+ D IT ++ ++ M + V DH++I ++ S AERG I Sbjct: 186 GNPEPSREDIRITRQLAEAGGTMGIPVHDHLIIAGTKHTSLAERGVI 232 >UniRef50_C5TNC6 DNA repair protein RadC n=3 Tax=Neisseria RepID=C5TNC6_NEIFL Length = 224 Score = 238 bits (609), Expect = 7e-62, Method: Composition-based stats. Identities = 78/222 (35%), Positives = 133/222 (59%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K + PREK+L G +AL+D ELLA+ LR GTRG + LA+ +L FGSL L++ Sbjct: 3 IKEWPEGERPREKLLAHGAAALSDAELLAILLRVGTRGMSAVDLARYLLSEFGSLGKLMS 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 ++ + + G+G+A + Q + E+ RR ++E+ L +P+ ++L+ L E+ Sbjct: 63 ADAKTLAAYKGMGLASYTQFAVVKEIGRRILGEDLQEQIILSNPKSVADYLRLHLGHEKI 122 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E+ + + L+ Q+++I R L GT+ V+ REI++ A+ A +LILAHNHP A P Sbjct: 123 EVSVALLLNRQNQLIAVRELSRGTVAENTVYIREIVKLALDEYADSLILAHNHPGSSARP 182 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S++D TER+ ++ +D+ +LDH ++ E S E+G++ Sbjct: 183 SESDVQFTERLKQALSLVDITLLDHFIVTAKETCSLREQGYM 224 >UniRef50_A3ER13 DNA repair protein (RadC) n=3 Tax=Leptospirillum RepID=A3ER13_9BACT Length = 237 Score = 238 bits (609), Expect = 9e-62, Method: Composition-based stats. Identities = 82/220 (37%), Positives = 128/220 (58%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 ++ S+ PRE++ G +AL D ELLA+ LR G RG+ + LA+ +L +G L G+ Sbjct: 10 VREWSEGDRPRERLRDRGPAALHDAELLAILLRVGNRGESSVALAQRLLAKYGGLEGVAA 69 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + S + G+G+AK AQ+ EL RR + S + L ++L E++ Sbjct: 70 AGFSALSSLSGMGLAKAAQIMAGIELGRRVSGKARSFRPEIRSARDVYDILGARLRDEKK 129 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F V+ LD +HR+ R+ G+L+ VHPRE + AI+ +A+A++ HNHPSG EP Sbjct: 130 ESFWVLLLDQRHRLQNAVRISEGSLSMTLVHPREAFQPAIRDSAAAVLFVHNHPSGDPEP 189 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 S D +TER+ + + + +RVLDH+V+G +VS ERG Sbjct: 190 SSDDWSLTERLKECGELLGIRVLDHVVLGDHAWVSLEERG 229 >UniRef50_B9E733 DNA repair protein RadC homolog n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E733_MACCJ Length = 223 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 81/217 (37%), Positives = 129/217 (59%) Query: 6 QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQ 65 + PRE++L +G + LT+ ELL+L + +G R ++V T+A+ +LE+ G + L +++ Sbjct: 7 ECDKPRERLLTYGAAQLTNQELLSLIIGSGVREENVYTVAQRLLEHIGHIGDLRYMTFQE 66 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMV 125 + GIG K A + I ELA R + + SP L +L +E F+V Sbjct: 67 LITIKGIGQKKAAMILAIIELAIRMHTHTKETRIKVKSPACAANLLMERLRYMTQEHFIV 126 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 + L++++ V+ +F G+LN VHPRE+ +EA+K +A+A+I+ HNHPSG EPS D Sbjct: 127 LSLNTKNIVMHESTIFIGSLNASIVHPREVFKEAVKRSAAAIIVVHNHPSGDPEPSYEDI 186 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 T+R+IK + + VLDHI+IG G YVS E+G + Sbjct: 187 EATKRLIKCGEIFGIDVLDHIIIGDGYYVSIKEKGIL 223 >UniRef50_A9IU27 UPF0758 protein Bpet3149 n=5 Tax=Bordetella RepID=Y3149_BORPD Length = 225 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 83/220 (37%), Positives = 132/220 (60%) Query: 3 NNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSE 62 + PRE++L+ G ++L D ELLAL LRTGTRG+ + + ++L +G L GL + Sbjct: 6 DLPPHERPRERLLRHGPASLRDAELLALALRTGTRGRTAIDMGSQLLHRYGGLRGLFAAS 65 Query: 63 YEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREI 122 ++ + G+G AK L I ELARR R+ + + P + + ++ L E Sbjct: 66 PQELMSLPGLGAAKAGTLAAILELARRAAEERLMRQQAMSEPGSVKRYFKTALANCAVEH 125 Query: 123 FMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSK 182 + ++LDSQ +IT L GTL V+PRE++REA++ +A+ALILAHNHPSG A+PS+ Sbjct: 126 CLALYLDSQLNLITSGELARGTLARASVYPREVVREALRHHAAALILAHNHPSGSAQPSQ 185 Query: 183 ADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 AD+ T + ++ +++R+LDH+++ VS AE G + Sbjct: 186 ADRDFTRHMQQALALVEIRLLDHLIVAGDTVVSMAELGLL 225 >UniRef50_A6QHJ5 UPF0758 protein NWMN_1555 n=52 Tax=Staphylococcus RepID=Y1555_STAAE Length = 228 Score = 238 bits (607), Expect = 1e-61, Method: Composition-based stats. Identities = 73/221 (33%), Positives = 117/221 (52%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K MPRE++L G +L++ ELLA+ + TG +G + ++ E+L++ +L L Sbjct: 3 IKEMVTSEMPRERLLSHGAKSLSNTELLAILINTGRKGFSSIDISNELLKSASNLNELKK 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 S V GIG+ K LK EL R + P +++ + + Sbjct: 63 SSINDLIKVKGIGLQKAITLKAAFELGERMGRRAENNRIKITQPSDVADYMIPTMKDLTQ 122 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+++ L+S++ VI +F GTLN VHPREI A++ NA+A+I HNHPSG P Sbjct: 123 EHFVILLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTP 182 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 S+ D + T R+ + + + +LDHI+IG + S E G+ Sbjct: 183 SQEDIITTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 223 >UniRef50_Q0AWG3 UPF0758 protein Swol_1642 n=12 Tax=Firmicutes RepID=Y1642_SYNWW Length = 235 Score = 238 bits (607), Expect = 1e-61, Method: Composition-based stats. Identities = 83/226 (36%), Positives = 131/226 (57%), Gaps = 4/226 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLL 59 +K + + PREK++ G L + ELLA+ L +GTR + L LA+++L G SL L+ Sbjct: 10 IKEMPETMRPREKLIARGEDKLDEAELLAIVLGSGTREMNALELARQLLARHGGSLRFLM 69 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYY---NVRMREESPLLSPEMTREFLQSQLT 116 ++ E+ + GIG+AK +K E+ RR +R +SP E RE ++ Sbjct: 70 SATLEELTAEKGIGMAKAVSIKAAIEMGRRVVGNIQLRRIIKSPEDVQEAVRELAMEEMR 129 Query: 117 GEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSG 176 +RE F V++LD + +IT + + G L+ VHPRE+ + A+K +A+++IL HNHPSG Sbjct: 130 HYDREHFRVLYLDRKGGLITMQDISIGGLHSSIVHPREVFKTAVKKSAASMILVHNHPSG 189 Query: 177 CAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS+ D IT R+I++ + M + +LDH++IG Y S RG I Sbjct: 190 DPTPSQEDIEITRRLIEAGKIMGIEILDHVIIGEINYCSLKARGLI 235 >UniRef50_C8WXL6 DNA repair protein RadC n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WXL6_ALIAD Length = 233 Score = 237 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 76/216 (35%), Positives = 124/216 (57%) Query: 7 LLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQF 66 PRE++++ G SAL ELLA +++G ++V +A+ + + G L L E + Sbjct: 14 EDGPRERLMRLGPSALRVDELLACIMQSGNGKQNVYEIAQSLCRHLGDLDRLADLEVAEL 73 Query: 67 SGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVI 126 V GIG AK Q+ EL RR E+ + + E +++ +L ++E F+ + Sbjct: 74 LSVPGIGPAKAVQIAAAVELGRRVARKPPGEKRQIRTAEDAAKYVMDRLRYLKKEHFVTL 133 Query: 127 FLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKL 186 LD++HRV+ G+L+ VHPREI R AI+I+AS+++ HNHPSG PS D Sbjct: 134 LLDTKHRVLAEDTSSVGSLDASIVHPREIFRRAIRISASSILCIHNHPSGDPSPSPEDIA 193 Query: 187 ITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +T+R++++ + + + VLDHIVIG G +VS G++ Sbjct: 194 VTKRLVEAGRVLGIEVLDHIVIGDGRFVSLRAEGYL 229 >UniRef50_Q3AF80 UPF0758 protein CHY_0341 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Y341_CARHZ Length = 226 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 82/221 (37%), Positives = 132/221 (59%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +KN + L PRE++L+ G +L ELLA+ L +GT ++ L LA +L FG L GL+ Sbjct: 5 IKNLPEELRPRERLLRHGPESLNPAELLAVLLGSGTPQENALELALRLLTTFGGLKGLIE 64 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 EQ GIG AK A+L ELARRYY + + L+P+ +L+ ++ +++ Sbjct: 65 VHPEQLKSFKGIGQAKAAKLLAALELARRYYELTGENKLNFLNPDDVYNYLRYKIGHKKQ 124 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E +V++L++++++ + G +NH V P +I REA+KI A A+I+AHNHPSG P Sbjct: 125 EQVVVLYLNTKNQLCGENIVAIGGVNHAGVSPGDIFREAVKIGAYAVIIAHNHPSGDPTP 184 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 SK D T R+ K+ + + +++LDHI++G +Y+S Sbjct: 185 SKEDIDFTGRVKKASEILGIKLLDHIILGENKYISMKAERL 225 >UniRef50_B7C9V0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9V0_9FIRM Length = 224 Score = 236 bits (603), Expect = 4e-61, Method: Composition-based stats. Identities = 77/222 (34%), Positives = 133/222 (59%), Gaps = 1/222 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K PREK L++G+ +L+D+EL+AL L++G + + V +A ++L+ L L+T Sbjct: 3 VKEMEVEQRPREKALRYGLESLSDLELVALILQSGNKNRSVFEIASDVLKESEGLSKLMT 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + GI K QL EL++R ++ +P+L PE E+ + + + Sbjct: 63 MHVNTLMQIQGIREVKALQLLASVELSKRVIKSKVYH-APILKPEDVIEWFKFEYGTMSQ 121 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+ ++LD++ ++I+HR LF GTLN VHPRE+ +EA NA+++++AHNHPSG P Sbjct: 122 ECFIALYLDTKSKLISHRVLFKGTLNESVVHPREVFKEAFLQNANSVLIAHNHPSGDCTP 181 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 SKAD +T +++ M + ++DHI++ + +Y SF E ++ Sbjct: 182 SKADFEVTYKMVHVAMTMGVCLVDHIIVCKNQYYSFKEHKYL 223 >UniRef50_B4RM65 UPF0758 protein NGK_1225 n=25 Tax=Neisseriaceae RepID=Y1225_NEIG2 Length = 225 Score = 235 bits (600), Expect = 8e-61, Method: Composition-based stats. Identities = 79/222 (35%), Positives = 131/222 (59%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K + PREK+L+ G +AL+D ELLA+ LR GTRG + LA+ +L+ FGSL L++ Sbjct: 3 IKQWPEGERPREKLLERGAAALSDAELLAILLRVGTRGMSAVDLARYLLQEFGSLGRLMS 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 +E + S G+G A F Q + E+ RR ++EE L P+ ++L+ L E+ Sbjct: 63 AEVGKLSAYKGMGTASFTQFAVVREIGRRILEEELQEEITLSDPDTVADYLRFHLGQEKV 122 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E+ + + L+ Q+++I R L GT+ ++ REI++ A+ A +LI+AHNHP G EP Sbjct: 123 EVSVALLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEP 182 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S+ D + T R+ ++ +D+ +LDH ++ SF + G + Sbjct: 183 SQEDIMFTRRLAQAMSLVDVSLLDHFIVTSQTVRSFRQLGLM 224 >UniRef50_UPI000185C66E DNA repair protein RadC n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185C66E Length = 221 Score = 235 bits (600), Expect = 8e-61, Method: Composition-based stats. Identities = 74/216 (34%), Positives = 115/216 (53%), Gaps = 1/216 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLL 59 +KN PREKM+ G +AL++ ELLA+ L +G+ + + L++ +L + G SL L Sbjct: 3 IKNWEDTDKPREKMITQGKTALSNAELLAILLGSGSANESAVALSRRILASVGNSLTALG 62 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 Q + GIG AK + E+ RR + + +P +Q + Sbjct: 63 KQTLAQLTTFKGIGEAKAITILAATEMGRRRAAETHEPQPKIEAPRHVFTLMQPLIGDLP 122 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 E F V++L+S +RVI RL SG + H V R + + A++ A +LIL HNHPSG Sbjct: 123 HEEFWVLYLNSANRVIHKCRLSSGGITHTTVDIRLLFKNALEQGAVSLILVHNHPSGSTT 182 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVS 215 PSK D +TER+ + +D+++LDHI++ EY S Sbjct: 183 PSKEDLELTERVRNAGDTLDIKLLDHIIVTEKEYYS 218 >UniRef50_C7RDS9 DNA repair protein RadC n=3 Tax=Anaerococcus RepID=C7RDS9_ANAPD Length = 228 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 83/222 (37%), Positives = 134/222 (60%), Gaps = 2/222 (0%) Query: 2 KNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTS 61 K+ + PREK+++ G S+LTD ELLA+ L TGT+ K+V+ L+KE+LE F S LL Sbjct: 8 KDLEKYDKPREKLIREGFSSLTDYELLAIILSTGTKDKNVIELSKEILEVF-SYEELLEI 66 Query: 62 EYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRM-REESPLLSPEMTREFLQSQLTGEER 120 E ++ + + GI AK ++ +L +R + ++ + S + + + +L+ ++ Sbjct: 67 EVKELTDIKGIKQAKATRVVAGLQLGKRINERVLDKKIEKITSSKDVYDIMSPRLSNLKK 126 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F I LDS++ +I + G L V+PRE+ + AIK +A ++IL HNHPSG +P Sbjct: 127 EYFYAILLDSKNVIIAKEVISIGDLGSTVVNPREVFKPAIKKSAKSMILVHNHPSGNPKP 186 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S D LIT+R+ ++ +D++VLDHIVIG Y SF + G + Sbjct: 187 STEDFLITDRLAEAGDILDIKVLDHIVIGNSSYYSFKKEGNL 228 >UniRef50_B4CZF8 DNA repair protein RadC n=2 Tax=Verrucomicrobia RepID=B4CZF8_9BACT Length = 231 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 80/227 (35%), Positives = 126/227 (55%), Gaps = 6/227 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 + + PREK+ G AL+D EL+A+ LRTG G + + +A+++L F SL GL Sbjct: 6 IHELPEQDRPREKLAAQGAGALSDSELIAILLRTGLPGANAVDVARKLLAEFKSLSGLAR 65 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 ++ S + G+G AK QL LA R + + L SPE+ + L ++ R Sbjct: 66 CSVKELSKIKGVGPAKAVQLVAAFGLASRLARETLARQR-LDSPELINDLLGPEMRALGR 124 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E ++ LD+++ +I + G+LN HPRE+ R A+ +A A+IL HNHPSG P Sbjct: 125 ESLRLVLLDTKYLLIRVEEISHGSLNESIAHPREVFRPALIYSAYAVILVHNHPSGDPTP 184 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGE-----YVSFAERGWI 222 S AD +T R+++ + + +R+LDH+++G G+ Y SF E G I Sbjct: 185 SSADHQLTRRLVQGAELLQIRLLDHVILGTGDNGRLPYFSFKEAGII 231 >UniRef50_Q64AS5 DNA repair proteins n=1 Tax=uncultured archaeon GZfos29E12 RepID=Q64AS5_9ARCH Length = 403 Score = 233 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 72/214 (33%), Positives = 125/214 (58%), Gaps = 2/214 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K+ Q PREK+ ++G L + ELLAL LRTG + ++ + ++ ++ +G L L Sbjct: 183 IKDICQAERPREKLERYGAGYLNNDELLALILRTGHQKENAIEMSHRLINEYG-LDKLSD 241 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNV-RMREESPLLSPEMTREFLQSQLTGEE 119 + + GIG AK Q+ + E +R+ + +E + PE + +L ++ Sbjct: 242 LALNELQEIKGIGFAKACQIIALFEFNKRHNKAVKTKEIVTIEKPEDVYNYFVDELKDKK 301 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 +E F + LDS++++I + GTL++ VHPRE+ +EAIK +A+ +IL HNHPSG E Sbjct: 302 KEHFYALLLDSKNKLIKKDLVSVGTLDNSLVHPREVFKEAIKNSAAGVILVHNHPSGDPE 361 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEY 213 PS+ D IT++I K+ ++++VLDH++I + Sbjct: 362 PSENDVEITQKIAKAGNILNIKVLDHVIIAEKGW 395 >UniRef50_A9KL05 DNA repair protein RadC n=7 Tax=Clostridiales RepID=A9KL05_CLOPH Length = 232 Score = 233 bits (594), Expect = 4e-60, Method: Composition-based stats. Identities = 69/225 (30%), Positives = 115/225 (51%), Gaps = 3/225 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEML---ENFGSLYG 57 MK+ P EK + G +AL+D EL+A+ LRTG++ LA ++L + L G Sbjct: 7 MKDLPASERPYEKCERDGAAALSDAELIAVILRTGSKETRSTELAAKILSYSNTYPGLRG 66 Query: 58 LLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTG 117 + + F +HGIG K QL + EL+ R + P E+ + Sbjct: 67 ISRMTQKDFMSIHGIGRVKAIQLLCLTELSIRMAKATFADGIRYTDPSSVAEYYMQDMRS 126 Query: 118 EEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGC 177 + E ++ D++ +++ + GT+N + PRE+ A+K A +IL HNHPSG Sbjct: 127 LKTEQSRLLMFDTKSKLLREEIISIGTVNASIMSPREVFLLAVKYEAVYIILLHNHPSGD 186 Query: 178 AEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PSK D +T+R+ ++ + + + ++DHI+IG Y+S E+G I Sbjct: 187 PTPSKEDIAVTKRMKEAGELLGVTLMDHIIIGDNRYISLKEQGII 231 >UniRef50_B5YDI9 DNA repair protein n=2 Tax=Dictyoglomus RepID=B5YDI9_DICT6 Length = 228 Score = 232 bits (593), Expect = 5e-60, Method: Composition-based stats. Identities = 75/223 (33%), Positives = 127/223 (56%), Gaps = 1/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K+ PRE++L +G AL+DVELLA+ LRTG + V LA+ ++ +FGSL + Sbjct: 6 IKDFPTSERPRERLLNYGEKALSDVELLAIILRTGDKKYSVYELAQNLIIDFGSLRRIAE 65 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLS-PEMTREFLQSQLTGEE 119 + GIGV K Q+K EL RR ++ + +S P + + + Sbjct: 66 VGIGELIKYPGIGVTKAIQIKASIELGRRIFSEKKSYFGESISNPYDAFLIFKEDMFDLK 125 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 E I++D +++ ++ R + G LN V PR+I + A++ N++ +ILAHNHPSG Sbjct: 126 EEHLFCIYMDIKNKCLSKRLIAKGDLNIVYASPRDIFKYALQENSAKIILAHNHPSGDLT 185 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS+ D + T+R+I++ + + + VLDH++I +Y+S E+ +I Sbjct: 186 PSEDDVIFTKRLIEAGKILGIEVLDHLIIHNEDYLSLKEKNFI 228 >UniRef50_C7M9C6 DNA repair protein RadC n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M9C6_CAPOD Length = 225 Score = 232 bits (593), Expect = 6e-60, Method: Composition-based stats. Identities = 73/222 (32%), Positives = 118/222 (53%), Gaps = 1/222 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLL 59 +KN + PREKM+ G +AL++ ELLA+ L +G+ + + L++ +L + SL L Sbjct: 3 IKNWADTDKPREKMISQGKTALSNAELLAILLGSGSADESAVELSRRILASVNNSLTTLG 62 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 +Q GIG AK + E+ RR + + +Q + Sbjct: 63 KQSLQQLQAFKGIGQAKAITILAATEMGRRRAAETPEPQPKIEVAHNVFVLMQPLIGELP 122 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 E F V++L+S +RVI RLFSG + H V R + + A++ A ALIL HNHPSG Sbjct: 123 HEEFWVLYLNSTNRVIHKARLFSGGITHTTVDVRLLFKTALEQGAIALILVHNHPSGSTT 182 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 PSK D +T+R+ + + +D+++LDH+++ EY+SF + Sbjct: 183 PSKEDIELTQRVKTAGEMLDIKLLDHVIVTEKEYLSFLDERL 224 >UniRef50_A5FMW5 UPF0758 protein Fjoh_0413 n=33 Tax=Bacteroidetes RepID=Y413_FLAJ1 Length = 229 Score = 232 bits (593), Expect = 6e-60, Method: Composition-based stats. Identities = 69/221 (31%), Positives = 120/221 (54%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K+ S+ PREK++ G AL+D EL+A+ + +G+R + + L++ +L + +L L Sbjct: 8 IKDWSEDDKPREKLMLKGKEALSDAELMAILIGSGSRNESAVALSQRILASAKNLNSLWK 67 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 Q GIG AK + EL RR + + + S + +Q + Sbjct: 68 MSVSQLIKFKGIGEAKAVSIVAALELGRRQRAEDILKLKKITSSKDAFTIMQPIIGELPH 127 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F V+FL++ ++VI+ +L G + V R + + ++ A+ LIL HNHPSG P Sbjct: 128 EEFWVLFLNNSNKVISKAQLSKGGIAGTIVDVRLVFKLGLENGATGLILCHNHPSGELNP 187 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 S+ADK IT++I + + +D+++LDH++I +Y SF + G Sbjct: 188 SQADKQITKKIKTAGEILDVKILDHLIITETKYYSFVDEGI 228 >UniRef50_D2MNQ5 Putative DNA repair protein RadC n=1 Tax=Bulleidia extructa W1219 RepID=D2MNQ5_9FIRM Length = 223 Score = 232 bits (592), Expect = 7e-60, Method: Composition-based stats. Identities = 82/221 (37%), Positives = 132/221 (59%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +KN + PREK L++G+S+L++ ELLAL LRTG R L +A E+L + GL Sbjct: 2 LKNIPVMEQPREKALQYGLSSLSNRELLALQLRTGYRHHSALEVADEILARADGISGLPR 61 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 ++ + GI K +L I E+ RR ++ + P + ++L+ ++ + Sbjct: 62 LSRQELIQIPGISQIKALELLAIFEIVRRSSAAKLPTLPRVQHPSVLFDWLKQEIGTSLQ 121 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+V+FL S RV++++ LF GT+N V PREI +EA+ +N+ +IL HNHPSG P Sbjct: 122 EKFLVVFLASDQRVLSYKILFVGTINASMVFPREIFKEALLLNSPNIILVHNHPSGNLSP 181 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 S+ D +T+RI ++ Q M ++VLDHI++ + +Y SF + G Sbjct: 182 SQEDISLTKRIKEAGQLMGVKVLDHIIVTQSDYFSFVQEGI 222 >UniRef50_A1B4F1 UPF0758 protein Pden_2304 n=44 Tax=Alphaproteobacteria RepID=Y2304_PARDP Length = 263 Score = 231 bits (591), Expect = 8e-60, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 123/212 (58%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 RE+ ++ G +A+ D ELL L L +DV LA+ +L+ FG +L++ + + V Sbjct: 52 RERFMQGGAAAMPDYELLELVLFRAIPRQDVKPLARRLLDRFGDFNRVLSAPPARLAEVS 111 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+G A +LK + A+R R+ L S + ++ + + E E F V++LD Sbjct: 112 GLGPAVLQELKIVEAAAQRLARSRVMHRPVLTSWDALLDYCHTAMAHGEIEQFRVLYLDR 171 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++ +I GT++HV V+PREI+R A++++ASALIL HNHPSG PS+AD +T R Sbjct: 172 KNVLIADEEQARGTVDHVPVYPREIMRRALELSASALILVHNHPSGDPTPSQADIGMTNR 231 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 I+ + + M + V DH++IGR +SF G + Sbjct: 232 IVAAAEVMGIAVHDHLIIGRSRELSFRSEGLL 263 >UniRef50_B7ANR2 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ANR2_9BACE Length = 246 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 73/227 (32%), Positives = 117/227 (51%), Gaps = 6/227 (2%) Query: 2 KNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLE------NFGSL 55 K+ + P EK + +G AL+D ELLA+ ++TGT G + LA +++ +L Sbjct: 16 KDLPASMRPYEKFMLYGAGALSDAELLAVIIKTGTTGISSIELAAGIIDMACNGSGSTNL 75 Query: 56 YGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQL 115 GL YE + GIG K Q+ + EL+RR +P ++ L Sbjct: 76 AGLTGIGYEDLVSIRGIGSVKALQIMAVIELSRRISKSCAYRRLDFRNPVSIADYYMEDL 135 Query: 116 TGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPS 175 E E +++ LD++ R+I + +GT+N V PREI A++ A +++ HNHPS Sbjct: 136 RHAECERLVLVMLDTKLRLIKDEIISTGTVNASIVSPREIFVAALRAGAVFIVMLHNHPS 195 Query: 176 GCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 G AEPS D IT R+ + + + + ++DHI+IG +VS E G + Sbjct: 196 GDAEPSSNDIAITRRVQLAGEMLGISLIDHIIIGDNRFVSLKESGLM 242 >UniRef50_C7PSZ0 DNA repair protein RadC n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PSZ0_CHIPD Length = 237 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 79/223 (35%), Positives = 121/223 (54%), Gaps = 1/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEML-ENFGSLYGLL 59 +K+ + PREK++ G SAL+D ELLA+ L G + K L LA+E+L +L + Sbjct: 14 IKDWPEDDQPREKLISKGNSALSDAELLAILLNDGYKQKSALALAQEVLRAASNNLSEMG 73 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 EQ + GIG AK ++ + ELARR M ++ + + + L Sbjct: 74 KLTLEQLKKIQGIGTAKATKIIAVMELARRRQAGCMLQKKTIRQGRDAALYFKPLLGDAA 133 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 E F V++L+ RV+ HR + G + V P+ I REA+++ A+ +IL HNHPSG Sbjct: 134 LESFHVLYLNHASRVLQHRCISIGGITGTIVDPKVIFREALELGATQVILCHNHPSGNLR 193 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS AD ITE++ + + +D+ VLDHI++ Y S E G+I Sbjct: 194 PSTADIQITEKLKAAGRLLDISVLDHIIVSEAGYCSMVEEGFI 236 >UniRef50_Q38XC8 UPF0758 protein LCA_0852 n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Y852_LACSS Length = 224 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 125/215 (58%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 L PRE++ +G ++L+D +L + LR+GT+ V +A+ +L+ + L ++ Q Sbjct: 8 LQPREQVALYGAASLSDEQLATVILRSGTQHLPVEVVAQRLLQRYPDFQDLEQADLVQLR 67 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 + GIG K +L+ I EL+RR N R + S +M + + L GE +E + ++ Sbjct: 68 QIEGIGPVKAIELQAICELSRRIQNQRTLRFGVVASSQMVGQRMIESLAGETQEQLLAVY 127 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 LD ++++I ++L+ GTLN HPRE+ + A++ +A+ IL HNHPSG PS D Sbjct: 128 LDVKNQIIQIKQLYLGTLNSSVAHPREVFKWAVQYSAAKFILVHNHPSGQLAPSTQDINF 187 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 T+RI+ Q M + LDH++IG +Y+S E G++ Sbjct: 188 TKRIVNCGQLMGITCLDHLIIGSSQYLSLREEGYL 222 >UniRef50_A2RLC4 UPF0758 protein llmg_1515 n=4 Tax=Lactococcus lactis RepID=Y1515_LACLM Length = 227 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 78/219 (35%), Positives = 124/219 (56%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K S + PRE++ G L+DVELLA+ LRTG + L LA E+L++FG+L Sbjct: 4 LKEKSYPMQPRERLELLGEEYLSDVELLAILLRTGRKKYSSLNLALELLQHFGTLDNFRK 63 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + + GIG K +L+ + EL +R + +LS + L ++ E+ Sbjct: 64 ASISELKEISGIGQTKAIELRAMIELGKRIQTTTRKRYGQVLSSKEYGMSLAFEMQNFEQ 123 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E +LD Q+++I + +F G NH PREI+ A+K + L++AHNHPSG +P Sbjct: 124 EHLTATYLDGQNQIIEKKTIFIGAFNHATASPREILYHAVKNLSVGLLVAHNHPSGNLQP 183 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAER 219 S+ADK+ T++I +C + + +DHI++G G Y SF ER Sbjct: 184 SQADKIFTKKIKNACDNIGINFIDHIIVGAGNYYSFRER 222 >UniRef50_Q6MAB0 UPF0758 protein pc1765 n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Y1765_PARUW Length = 231 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 69/222 (31%), Positives = 128/222 (57%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +++ + PRE++++ G +L+ +E+LA+ L +G++ VL +++ ++ FG L L+ Sbjct: 8 IQSLPKEERPRERLIRHGADSLSLIEILAIILGSGSKVASVLEVSRALVTRFGGLEALMQ 67 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + V GIG AK QLK L R +++ + + ++ +L E R Sbjct: 68 ATLTELLEVQGIGFAKAIQLKAALNLGFRATRQQIKSRYLIEHSSHAYQLVKDELENENR 127 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 EIFM IF D++ +IT+ + G+L+ VHPRE+ AI+ A++LI+ HNHPSG P Sbjct: 128 EIFMAIFQDTKGYLITYEVISIGSLSQTLVHPREVFYSAIRHKAASLIVVHNHPSGDPMP 187 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S D +T+ +++ + + + + DH++IG+ YVSF ++ + Sbjct: 188 SNQDLKLTQILLEGSRLLGIPLRDHLIIGKNSYVSFKDQNLL 229 >UniRef50_A6DS55 DNA repair protein RadC n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DS55_9BACT Length = 235 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 77/229 (33%), Positives = 135/229 (58%), Gaps = 7/229 (3%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLL 59 +K+ ++ PRE+ML+ G + L++ ELLAL + +GTR + L LA+E+L +F S++ L Sbjct: 5 IKDLAEFDRPRERMLQLGEAQLSESELLALIIGSGTREQSALGLAREILAHFDNSVFRLS 64 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 + E +HG+G AK L+ + LAR+ E+ + PE +L L G+ Sbjct: 65 RATLEDLETIHGVGPAKATSLRAVFALARKLVAEEAMEQFTIHRPESAAPYLIQLLAGKS 124 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 +E F ++ LD+++R++ ++ G L+ VHPRE+ REA++ + +ILAHNHPSG Sbjct: 125 KEEFHILLLDTKNRLMRSSQISIGLLDRSHVHPREVFREALRYGTAKIILAHNHPSGDPS 184 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRG------EYVSFAERGWI 222 PS D T+ +I++ + + ++V+DH++IG ++VS + G + Sbjct: 185 PSPQDIECTKNLIEAGEILGVKVVDHLIIGHKLPGDSRQFVSLRQLGLV 233 >UniRef50_C4ZA49 DNA repair protein RadC n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZA49_EUBR3 Length = 229 Score = 229 bits (584), Expect = 6e-59, Method: Composition-based stats. Identities = 77/223 (34%), Positives = 119/223 (53%), Gaps = 1/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLE-NFGSLYGLL 59 +KN P EK L G S L+D +LLA+ ++TGTR K V+ +A+++L +L L Sbjct: 7 IKNLPASERPYEKFLSLGASGLSDADLLAIIIKTGTRDKTVIDIAQDILSGKHSNLLNLY 66 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 YE+ + GIG K QLK IAEL+ R + + + +P+ ++ Q+ Sbjct: 67 EMSYEELLSIPGIGQIKAIQLKAIAELSLRIAKTKKVQSIRMNNPQTIADYYMEQMRHLT 126 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 E+ + + D + R + + + G+L+ V IIR A+ NAS L+L HNHPSG Sbjct: 127 NEVVICAYFDVKSRFLGDKFISKGSLSSSVVDIGSIIRTALDKNASKLVLLHNHPSGDCT 186 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS+ D +T+R+I+ + + DHI+IG EY SF E I Sbjct: 187 PSRNDIAVTDRLIEGSGIFSIELCDHIIIGDNEYYSFYENKLI 229 >UniRef50_C5NXB5 DNA repair protein RadC homolog n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXB5_9BACL Length = 257 Score = 228 bits (581), Expect = 1e-58, Method: Composition-based stats. Identities = 76/217 (35%), Positives = 124/217 (57%), Gaps = 1/217 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K S+ PREK K G AL+D E+LA+ LRTGT+ ++V+ L+ +L++ G + L Sbjct: 6 IKEFSEEDRPREKFKKLGALALSDKEILAILLRTGTKNQNVIELSDIILKDIGGITKLRD 65 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + GIG K + E ARR Y + + SP+ +L+S L + Sbjct: 66 VTLTELMKHKGIGQEKAIHILANIEFARRIYATNVL-DVKCDSPQSIANYLKSSLENLTQ 124 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E+F+V+ +D++ ++I R +F G+L+ VHPRE+ + AIK +AS+++ HNHPSG A P Sbjct: 125 EVFVVLDIDTKGKIIEKREVFKGSLSMSVVHPREVFKLAIKNSASSIVCVHNHPSGDATP 184 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFA 217 S D T +++ + + + +LDHIV+ + YVS Sbjct: 185 SIEDIKTTINLMEVGEIVGIEMLDHIVVAKKGYVSIR 221 >UniRef50_UPI0001C34E02 DNA repair protein RadC n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34E02 Length = 243 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 78/225 (34%), Positives = 118/225 (52%), Gaps = 3/225 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEML--ENFGSLYGL 58 MK P E+ + G ALTD ELL++ +RTG RG+ L+LA+ +L + GL Sbjct: 19 MKEIPGPDRPYERCERLGPEALTDAELLSIIIRTGARGEHSLSLAQRILALNEPQGILGL 78 Query: 59 LTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREE-SPLLSPEMTREFLQSQLTG 117 L + + V GIG K QL I EL+RR + ++E PE F + Sbjct: 79 LHLTLPELTAVKGIGRVKGLQLLCIGELSRRIWKTLAQKEIKSFDGPESIAAFYMEDMRH 138 Query: 118 EEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGC 177 E+E ++ ++++ +I LF GT+N REI EA++ +A L L HNHPSG Sbjct: 139 MEQEELHLMMFNTKNMLIRESCLFRGTVNASVASAREIFIEALRYHAVRLALVHNHPSGD 198 Query: 178 AEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS D +T ++ ++ + + + +LDH++IG Y SF ERG I Sbjct: 199 PSPSGEDIRLTRQVAQAGELLGVTLLDHVIIGDNSYFSFKERGII 243 >UniRef50_C7GYN9 DNA repair protein RadC n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYN9_9FIRM Length = 230 Score = 227 bits (579), Expect = 2e-58, Method: Composition-based stats. Identities = 79/224 (35%), Positives = 123/224 (54%), Gaps = 2/224 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG--SLYGL 58 MK Q PRE++++ G+ AL+ EL+A+ L TG + K V L+ +LE+ + L Sbjct: 1 MKKKKQFDAPRERLIEKGVEALSMAELIAIILSTGGKNKTVTELSHAILESKDRLGITSL 60 Query: 59 LTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGE 118 + E +GIG AK +L EL +R + + + + +PE +L E Sbjct: 61 CELDLEDLMNFNGIGEAKAMRLIAALELGKRQSEISVNIKRKIGNPEAIFHLFHEKLRYE 120 Query: 119 EREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCA 178 ++E F + L++ VI R+ G L HPRE+ + AIK AS++IL HNHPSGC Sbjct: 121 KKENFYAVMLNTAKHVIAKERISIGGLACAYAHPREVFKSAIKKAASSVILVHNHPSGCV 180 Query: 179 EPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS D LIT+R+I + + + + V+DHI+IG Y+S + G+I Sbjct: 181 TPSDEDVLITKRLINAGRIIGIEVIDHIIIGNENYLSMKKEGYI 224 >UniRef50_UPI0001BC32AB DNA repair protein RadC n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC32AB Length = 227 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 69/219 (31%), Positives = 124/219 (56%), Gaps = 2/219 (0%) Query: 6 QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG--SLYGLLTSEY 63 +L+P EK ++G ++LTDVELLA+ +R+GT+ K+ + +A+E+ + G + GL Sbjct: 9 NVLLPYEKCERYGAASLTDVELLAVIIRSGTKDKNCIQVAEELFKLSGNMGILGLKHLTQ 68 Query: 64 EQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIF 123 + + GIG K + I EL+ R M + + + + ++ +L E E F Sbjct: 69 RDYCSIDGIGKVKSIMFQCIGELSSRISKATMAKRTVFNTSKDAADYCMEELRHLEYECF 128 Query: 124 MVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKA 183 MV+ L+++ +I + L GT+N+ + RE+ R A+ A +I+ HNHPSG PS+ Sbjct: 129 MVLLLNTKCELINEKILSMGTVNYTCITSREVYRYALSKGAVYIIVVHNHPSGDPTPSRE 188 Query: 184 DKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 D L T+++ ++ + + + ++DHI+IG Y+S E+ I Sbjct: 189 DSLCTKKLKEAGELVGIPLIDHIIIGDNRYISLKEQDMI 227 >UniRef50_C9LCX8 DNA repair protein RadC n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LCX8_9BACT Length = 228 Score = 226 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 66/223 (29%), Positives = 114/223 (51%), Gaps = 1/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLL 59 + S+ PREK + G L+ ELLA+ + +G GKD + L KE+L + SL L Sbjct: 5 INQWSKEDRPREKFEELGPRQLSSAELLAILIGSGCPGKDAVVLMKEILNDHDNSLRRLG 64 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 + + GIG AK + EL RR + + P+ F + +L Sbjct: 65 RVDIQSLCRYAGIGPAKAITILAACELGRRRAEEPAEQRPLMDGPQKIYSFFRQRLEDTP 124 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 E F +FL+ + ++++ + G L V R + +A++ A+AL + HNHPSG Sbjct: 125 HEEFHAMFLNRRLQLVSEALIGRGGLTETTVDVRLLFGKALEAKATALAICHNHPSGNPR 184 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS+AD +T+++ ++ + +D+R++DHI++ Y S+ E G + Sbjct: 185 PSQADDRLTQKVAQAARLLDIRLVDHIIVADKCYYSYQEEGKL 227 >UniRef50_C0BM81 DNA repair protein RadC n=2 Tax=Bacteroidetes RepID=C0BM81_9BACT Length = 231 Score = 226 bits (577), Expect = 4e-58, Method: Composition-based stats. Identities = 75/223 (33%), Positives = 122/223 (54%), Gaps = 1/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGS-LYGLL 59 MK S PREK L+ G LTD ELLA+ L G+ G+ L+LAK +L + L L Sbjct: 9 MKAWSVEDQPREKYLRLGGQKLTDAELLAIVLGNGSVGQSALSLAKTLLIACDNDLQKLF 68 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 E+ G+G K ++K + R +V L S L+ L G Sbjct: 69 ELSIEKLMDFKGVGKVKAIKIKASLDFGYRLLHVNATVPLSLSSSGAAFSILKPVLIGLT 128 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 E F V++LD+ + +I L G V R ++++AI+ A+A+I+AHNHP+G + Sbjct: 129 YEEFWVLYLDNSNVLIERSLLGKGGFTATVVDIRLVLQQAIRWGATAMIVAHNHPTGNLK 188 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS +DK +T+++ ++ + +D+++LDHI++G+ EY SFA++ + Sbjct: 189 PSHSDKALTQKLKEAAKVLDIKLLDHIIVGKNEYFSFADQNLL 231 >UniRef50_B9XSW5 DNA repair protein RadC n=1 Tax=bacterium Ellin514 RepID=B9XSW5_9BACT Length = 244 Score = 226 bits (576), Expect = 5e-58, Method: Composition-based stats. Identities = 81/227 (35%), Positives = 129/227 (56%), Gaps = 6/227 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K+ PRE++++ G L + EL+A+ LRTG +G +T+A+++L FG+L L Sbjct: 16 IKDLPDAERPRERLVQHGADVLKNSELIAILLRTGLKGVSAITVAEQLLHRFGTLDTLSR 75 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + V GIG K LK LARR E + L +PE + L+ + E Sbjct: 76 ATLADLCKVKGIGRDKAIALKSAFTLARRMAAELKPEGTVLDNPEAIADLLREENRSYEV 135 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F V+ L+++ ++I + GTL+ + +HPRE+ + AI NASA++LAHNHPSG P Sbjct: 136 ENFQVVLLNTRRKLIRVENITQGTLDTLLIHPREVFKSAISANASAIVLAHNHPSGDPTP 195 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGR------GEYVSFAERGW 221 S+AD +T +I++ Q + + +LDHI++GR +Y S E G+ Sbjct: 196 SEADIKVTRDLIRAGQLLKIEILDHIILGRRTNERPKDYASLRELGY 242 >UniRef50_A1BHA1 UPF0758 protein Cpha266_1761 n=11 Tax=Chlorobiaceae RepID=Y1761_CHLPD Length = 223 Score = 225 bits (575), Expect = 6e-58, Method: Composition-based stats. Identities = 73/222 (32%), Positives = 125/222 (56%), Gaps = 2/222 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 + + PRE+ L+ G ++L+ ELLAL LR+GTR +++ ++ FG L L Sbjct: 3 IHDLDPENRPRERFLRTGPASLSPSELLALVLRSGTRNNNIIDTCNALIARFG-LERLAD 61 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + GIG AK Q+ + EL +R + R + LS E++ ++ + Sbjct: 62 IPLSELQEIKGIGQAKAMQIIAVFELNKRIHYSRNLQRKV-LSARDVFEYMAGRVPDITK 120 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E V+ L++++++I + ++ GTLN HPRE+ + AI+ +A A+IL HNHPSG EP Sbjct: 121 EHLFVLHLNTKNQIIRNEQVTVGTLNASLAHPREVFKSAIRESAHAIILVHNHPSGDVEP 180 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S AD+ +TE + ++ F+ + +LDH++IG + SF E + Sbjct: 181 SNADRQVTEILRQAGSFLQIDLLDHVIIGVDTWFSFREHSLL 222 >UniRef50_A7HJG0 DNA repair protein RadC n=3 Tax=Thermotogaceae RepID=A7HJG0_FERNB Length = 225 Score = 225 bits (575), Expect = 7e-58, Method: Composition-based stats. Identities = 83/212 (39%), Positives = 123/212 (58%), Gaps = 4/212 (1%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLLTSEYEQFSG 68 PREK+LK G AL EL+A+ LRTGT GKDVL +KE+ FG SLY + + ++ F Sbjct: 7 PREKLLKEGSEALETSELIAILLRTGTNGKDVLETSKELFNKFGGSLYKMSRATFDDFKS 66 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPL-LSPEMTREFLQSQLTGEEREIFMVIF 127 + G+G K L ELA+R P SPE ++ + +EI VIF Sbjct: 67 IKGLGDVKIVTLMAALELAKRLVKEETVILDPKLTSPENVFQYCI-DMQSYPQEIVRVIF 125 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 LD++ +VI + + GT+N HPR+I REAI +++ +ILAHNHPSG PSK D + Sbjct: 126 LDTKLKVIGSKDVSKGTINSSMAHPRDIFREAILRSSTGIILAHNHPSGDPTPSKDDIEL 185 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAER 219 T++I K+ + + + + DH++IG + S ++ Sbjct: 186 TKKIKKAGELLGINLHDHVIIG-QTFYSLRQK 216 >UniRef50_D1VVJ8 DNA repair protein RadC-like protein n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVJ8_9FIRM Length = 236 Score = 225 bits (575), Expect = 7e-58, Method: Composition-based stats. Identities = 72/228 (31%), Positives = 129/228 (56%), Gaps = 6/228 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGS------ 54 +K+ ++ P+EK+L G SALT+ ELLAL +RTGT+ + L +++L Sbjct: 8 IKDMTEEERPQEKLLHLGPSALTNAELLALIIRTGTKELTSVELCEKILRELKRENNSSL 67 Query: 55 LYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQ 114 L GL + ++ + + G+G AK A + LA R + + ++ + SPE +++ + Sbjct: 68 LSGLRIASMDKLTAIKGVGQAKAAMIMAALTLAERLNSSSIYDKKKITSPEDAAKYVMAS 127 Query: 115 LTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHP 174 + E E+F +I L+++ + R + G +N VHPRE+ R+AI A ++IL HNHP Sbjct: 128 MRDLETEVFRIIILNTKKEIKYIREISHGIINMTVVHPREVFRQAISDGAHSIILLHNHP 187 Query: 175 SGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +G PS+ D+ +T R+++ + + + + DHI+IG + SF + G + Sbjct: 188 TGDPSPSQEDRNLTRRLVEVSKIVGIDICDHIIIGDNTFFSFLKEGIL 235 >UniRef50_C4FYP9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FYP9_ABIDE Length = 240 Score = 225 bits (575), Expect = 7e-58, Method: Composition-based stats. Identities = 78/222 (35%), Positives = 128/222 (57%), Gaps = 1/222 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLL 59 +++ + P EK K GI+ L+D ELLAL LRTGT+ + + L +++LE+ G SL GL Sbjct: 6 IEDLPEDARPFEKYRKQGITMLSDAELLALVLRTGTKNINCMELCRKVLESGGGSLAGLY 65 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 ++ + G+G K ++ I ELARR R + PL + + ++ + Sbjct: 66 GKTEKELCNIQGVGPVKAVEIICICELARRIARTRHSYDEPLDTAAKISKRYMEEMRHFK 125 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 E +++ LD + R+I + GT+N + PRE+ +A+K A L+L HNHPSG Sbjct: 126 EEHVVLLLLDIKCRLIKELTISIGTINQSFLRPREVFIQALKYEAVNLVLIHNHPSGDPT 185 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 PSKAD ++T++I++ + + + ++DHI+IG YVSF E+G Sbjct: 186 PSKADIIVTDKILEVSELVGIPLVDHIIIGDCCYVSFREKGL 227 >UniRef50_B9Y7M6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7M6_9FIRM Length = 228 Score = 225 bits (574), Expect = 9e-58, Method: Composition-based stats. Identities = 72/222 (32%), Positives = 129/222 (58%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 ++ PREK L GI ++ E+LAL LR+G G L +A ++L+ + GL Sbjct: 6 VREMPCEERPREKALHQGIEHCSNKEILALILRSGVPGASSLMIADQLLQRSQGVRGLSR 65 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 ++ + GI + ++ ELARR + RE + +P+ +L ++ G+++ Sbjct: 66 LTLKELMQIKGISQVRGLEILACFELARRISEEQTREIDVVANPDALMAWLGREIGGKQQ 125 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+ I+LD+++ ++ HR LF GTL+ VHPRE+ +EA+ +A +++ HNHPS P Sbjct: 126 EHFLAIYLDAKNHILEHRLLFKGTLDASIVHPREVFKEALLASACRVLVVHNHPSQDLTP 185 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S AD++IT+R+ ++ + + + +LDH+++G +Y SF G + Sbjct: 186 SLADRIITQRLKETGELIGIELLDHLIVGTTQYFSFRAHGLL 227 >UniRef50_Q3JV52 UPF0758 protein BURPS1710b_1139 n=75 Tax=Proteobacteria RepID=Y1139_BURP1 Length = 278 Score = 224 bits (572), Expect = 1e-57, Method: Composition-based stats. Identities = 89/215 (41%), Positives = 135/215 (62%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 +PRE++L G +AL+D EL+AL L +G G DV LA +L FGSL LL + + F Sbjct: 64 DLPRERLLARGPAALSDAELVALLLGSGLPGHDVFALAHTLLARFGSLRALLDAAPDDFK 123 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 G+ GIG A+ A L + ELARR + RE + SP ++L+ + RE+F+ +F Sbjct: 124 GLRGIGPARTAILVAVVELARRALAEKARERPLVDSPGAVDDYLRLLIGTRPREVFVCLF 183 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 LD++HR++ G+L + V+PREI+R A+ +NA+ALI+AHNHPSG PS AD+ + Sbjct: 184 LDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADRRL 243 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 T + + +D++++DH V+G + SFA+ GWI Sbjct: 244 TRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 278 >UniRef50_UPI000196B4AA hypothetical protein CATMIT_00107 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B4AA Length = 226 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 76/219 (34%), Positives = 120/219 (54%), Gaps = 1/219 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K Q PREK L GI +LTD ELLAL LRTG + + VL L+ +L + G T Sbjct: 2 IKGLEQSSQPREKALLNGIESLTDEELLALLLRTGNKEQSVLDLSSTILREIHGMNGFHT 61 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + GI AK + E ++R N+ +P L+++++ + Sbjct: 62 ITFAKLLSFKGINKAKAIGIMAALEFSKRI-NIHTNINEVYDNPTKVFYHLETKMSHLSQ 120 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+++ LD+ +R+I + LF G++N V REI REA+ N ++I HNHPSG A P Sbjct: 121 EHFLIMILDNHNRLIAEKTLFIGSVNMSIVSAREIFREALAFNGVSIICVHNHPSGDAHP 180 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAER 219 S D +T++++ + M++ ++DHI+IGR +Y SF Sbjct: 181 SSEDISMTQKLVDLGKMMNVDIVDHIIIGRNQYYSFKAE 219 >UniRef50_C2KVW9 Possible DNA repair protein RadC n=1 Tax=Oribacterium sinus F0268 RepID=C2KVW9_9FIRM Length = 229 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 87/226 (38%), Positives = 134/226 (59%), Gaps = 5/226 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLE---NFGSLYG 57 +K + Q L PREK ++ G+SALTD ELLA+ LRTGTR + VL LA+++L + L G Sbjct: 5 LKESGQEL-PREKAIRLGVSALTDEELLAVILRTGTREESVLALAEKVLHLSPVYDGLVG 63 Query: 58 LLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREE-SPLLSPEMTREFLQSQLT 116 L+ E + G+G K +L+ I ELA+R +N ++REE SP ++ + +L Sbjct: 64 LMQYSLEDLQAIKGVGETKALELQVIGELAKRIWNRKIREEVQSFRSPGSVLQYFKEELR 123 Query: 117 GEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSG 176 E V+FLD++ +++ L G+ N + REI EA++ + IL HNHPSG Sbjct: 124 HLSYEEVHVLFLDTKAQLLKDFLLSKGSSNASILSGREIFMEALRAASVCFILVHNHPSG 183 Query: 177 CAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS+ D+ TE I K+ +++ + ++DHI+IG +Y SF E+G I Sbjct: 184 DPHPSREDERATEEIYKAGEYLGIHLMDHIIIGDNQYYSFKEQGKI 229 >UniRef50_D1QST5 DNA repair protein RadC n=13 Tax=Bacteroidales RepID=D1QST5_9BACT Length = 234 Score = 223 bits (570), Expect = 3e-57, Method: Composition-based stats. Identities = 66/220 (30%), Positives = 116/220 (52%), Gaps = 1/220 (0%) Query: 4 NSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGS-LYGLLTSE 62 ++ PREK+ + G SAL++ ELL + + +GT + + L K ++ + + L L Sbjct: 15 WAEEDRPREKLERLGPSALSNAELLGILIGSGTPNESAVDLMKRIMMDCNNNLNTLGKLS 74 Query: 63 YEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREI 122 Q G+G AK + EL +R + E + S + E+L ++ + E Sbjct: 75 IRQLEQYKGVGPAKAITILAACELGKRRAMEKAEERQSIDSSKAIYEYLHPRMQDLDVEE 134 Query: 123 FMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSK 182 V+ L+ +++I R+ G ++ V R I++EA+ NA+ L LAHNHPS A+PS Sbjct: 135 AWVMLLNQHYKLIKALRISHGGISETAVDVRIILKEALLCNATVLALAHNHPSNHAQPSG 194 Query: 183 ADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 D +T+R+ K+C+ + + LDH++I G Y S+ + G + Sbjct: 195 PDDQLTQRVKKACEALRIYFLDHVIITDGTYYSYHDSGRL 234 >UniRef50_A9BIK5 DNA repair protein RadC n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BIK5_PETMO Length = 222 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 78/214 (36%), Positives = 123/214 (57%), Gaps = 2/214 (0%) Query: 4 NSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEY 63 L PREK+ K+G +LTD EL+A+ LR G R +V +++++L+ + +L L+ Sbjct: 1 MEDQLKPREKLEKYGPQSLTDQELIAIILRHGVRNYNVFDVSEQILKKYKTLSELVDISL 60 Query: 64 EQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREE-SPLLSPEMTREFLQSQLTGEEREI 122 E+ S G+G LK E+ +RY+ ++R++ + SPE + + E Sbjct: 61 EEISKEKGVGKVGAINLKAALEIGKRYHLQKLRQKYQKVTSPEEAYHVCEDMI-YLSTET 119 Query: 123 FMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSK 182 IFLDS+ +IT + + +GT+N HPR+I REAI NA + IL HNHPSG PS Sbjct: 120 VRAIFLDSKLHIITIKDISNGTVNMSIAHPRDIFREAIMYNAVSFILVHNHPSGDPTPSM 179 Query: 183 ADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSF 216 D+ IT++I+ S + + + + DHI+IG+ Y SF Sbjct: 180 HDRDITKKIMDSGEILGINMNDHIIIGKDSYFSF 213 >UniRef50_D2BJ47 DNA repair protein n=5 Tax=Dehalococcoides RepID=D2BJ47_DEHSV Length = 275 Score = 223 bits (568), Expect = 4e-57, Method: Composition-based stats. Identities = 86/212 (40%), Positives = 124/212 (58%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 RE+ LK G+ L D E++ L L GT +D AKE +++FGSL +L + + + Sbjct: 31 RERFLKAGLDGLNDYEVVELLLTLGTPRRDCKQAAKEAIKHFGSLRAVLEASPAELLSIK 90 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 GIG L I E++RRY + E+ + + ++L + G ++E+F VI+LDS Sbjct: 91 GIGEVNSMALTLIREVSRRYLKDGIMEKPVCNTAQQVFDYLYCAMRGLKKEVFKVIYLDS 150 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 QHRV+ LF+GT+ + PRE+I AI NASALI HNHPSG EPS+ADK +T Sbjct: 151 QHRVLELADLFTGTVASGSIVPREVIAAAISQNASALIFVHNHPSGKIEPSQADKDVTRE 210 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++ + M +R LDHI+IG Y SFA G + Sbjct: 211 LVYAAMVMKIRALDHIIIGDNCYFSFAAAGIM 242 >UniRef50_B5YL92 DNA repair protein RadC n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YL92_THEYD Length = 222 Score = 222 bits (567), Expect = 5e-57, Method: Composition-based stats. Identities = 77/222 (34%), Positives = 127/222 (57%), Gaps = 6/222 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K+ PREKM K G AL+D+ELLA+ L +G +GKDV +A+++L+ + Sbjct: 4 IKSIPNFDRPREKMEKKGAKALSDLELLAVLLGSGIKGKDVFEVARDILKL--TQEDFNN 61 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + G+G+AK Q+ E ++R+ ++E + + + + +L +++ Sbjct: 62 LNLDNLKNIEGVGLAKACQIMAAIEFSKRFL---LKEGIKIKNVDDVLKIT-EELKDKKQ 117 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+ + LD +I R +F GTLNH VHPREI +AI A+ +I HNHPSG +EP Sbjct: 118 EYFLSLTLDGASNLIQKRTVFIGTLNHSIVHPREIFADAISDRAAGIIFVHNHPSGDSEP 177 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 SK D IT+R+++ + + + V+DHI+I + Y SF G + Sbjct: 178 SKQDIEITKRLVEIGKMLGIEVIDHIIISKNGYYSFQAEGML 219 >UniRef50_B5Y6A0 UPF0758 protein COPRO5265_1522 n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=Y1522_COPPD Length = 235 Score = 222 bits (566), Expect = 9e-57, Method: Composition-based stats. Identities = 76/226 (33%), Positives = 124/226 (54%), Gaps = 4/226 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K PRE +L G L D +LLA+ LRTG + + LA+ +L FG GL Sbjct: 10 IKEWIVSERPRELLLSKGPEHLPDAKLLAIILRTGNKEETAEDLARRLLNTFGGFTGLYR 69 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMT----REFLQSQLT 116 + E+ + G+G AK AQ+K E+ +R+ EE+ + +PE + S L Sbjct: 70 ASVEELLQIKGMGKAKAAQVKAALEIGKRFLQNETVEEARITTPEDAIEYAARYFSSMLM 129 Query: 117 GEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSG 176 E +E F ++ LD ++R I H + G+ V P+EI+++ +A ALIL HNHPSG Sbjct: 130 NEGKEHFWILLLDRKNRPIKHVEISVGSSIQTTVDPKEILKQVSLTSAQALILIHNHPSG 189 Query: 177 CAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS+ D +T+++ ++C+ + ++LDHI++G+ ++VS A I Sbjct: 190 DPSPSREDVAVTKQLKQACELVGAQLLDHIIVGKNQHVSLAREKLI 235 >UniRef50_B9L1S0 DNA repair protein radC homolog n=4 Tax=Bacteria RepID=B9L1S0_THERP Length = 261 Score = 221 bits (565), Expect = 9e-57, Method: Composition-based stats. Identities = 81/221 (36%), Positives = 123/221 (55%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K PRE++ ++G LT+ ELLA+ L TGTRG+ VL LA+ +L FG L GL Sbjct: 36 IKELPASERPRERIQQYGPEVLTNAELLAIILNTGTRGESVLDLAQRLLVEFGGLVGLAR 95 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 ++ HG+G AK A+LK EL RR + E + +PE +++ E+ Sbjct: 96 ADLASLRRFHGLGEAKAAKLKAALELGRRLALAQPEERPVIRTPEDVYAIAGAEMATLEQ 155 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E V+ LD+++RV+ + G +N +V E+ REAI+ N AL+L HNHPSG P Sbjct: 156 EQLRVVLLDTRNRVVRTVTVAQGHVNGAQVRIAELFREAIRANTPALVLLHNHPSGDPTP 215 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 S+ D +TE +++ + + V+DH+VIG G + S G Sbjct: 216 SRQDIELTESAVEAGTLLGIEVVDHLVIGHGRFCSLRRLGL 256 >UniRef50_C2BCF6 DNA repair protein RadC n=2 Tax=Anaerococcus RepID=C2BCF6_9FIRM Length = 226 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 83/223 (37%), Positives = 139/223 (62%), Gaps = 2/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K+ PREK++K G ++L++ ELLA+ + TGT K+ + LA+E+L F S LL Sbjct: 5 IKDMKLTDRPREKLIKLGHASLSEKELLAIIISTGTDKKNAIELAEEILATF-SEEALLE 63 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRM-REESPLLSPEMTREFLQSQLTGEE 119 E E+ + ++GI AK +++ + +R + +++ + S E EF++ ++ ++ Sbjct: 64 IEVEELTKINGIKEAKASKIVASLQFGKRIKEKILNKKKYQINSNEEAYEFIKDTISLKD 123 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 RE F I L++++ VI+ + G L+ V+PRE+ + AIK +A ++ILAHNHPSG Sbjct: 124 REYFYTILLNNKNEVISKELISIGDLSSSIVNPREVFKPAIKKSAKSMILAHNHPSGNPS 183 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PSKAD LIT R+I + + +D+ VLDH++IG G YVS + +I Sbjct: 184 PSKADLLITHRLIDAGEILDITVLDHLIIGHGTYVSLKKDNYI 226 >UniRef50_Q7MVX9 UPF0758 protein PG_0894 n=24 Tax=Bacteroidales RepID=Y894_PORGI Length = 227 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 71/225 (31%), Positives = 115/225 (51%), Gaps = 3/225 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLL 59 +K + PREKM++ G LTD ELLA+ + +G + + LA+E+L SL L Sbjct: 3 IKQLHESDRPREKMIRLGARCLTDAELLAILIGSGNDRQTAIQLAQEILAKMDNSLPRLA 62 Query: 60 TSEYEQFS-GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGE 118 + ++ + G+G AK + EL+RR + M + M + LT Sbjct: 63 KCDIQELTGSFRGMGPAKAVTVMAAMELSRRIPSQEMPRRESITDSRMAYRTISPFLTDL 122 Query: 119 EREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCA 178 +E V+ L+ ++I+ L G ++ R I+ +A+ ASA+ILAHNHPSG Sbjct: 123 PQEEMWVLLLNQSGKIISMENLSRGGVSETSADVRLIMHKAVSHLASAIILAHNHPSGTV 182 Query: 179 EPSKADKLITERIIKSCQFMDLRVLDHIVIGRGE-YVSFAERGWI 222 PS+ D +T+R+ K+ + R+ DH++IG Y SFA+ G + Sbjct: 183 RPSEQDIQLTQRVQKAATLLGFRLNDHLIIGDDGAYFSFADEGLL 227 >UniRef50_B2URH1 DNA repair protein RadC n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2URH1_AKKM8 Length = 246 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 81/223 (36%), Positives = 133/223 (59%), Gaps = 8/223 (3%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 ++ +PREK+L+ G +L++ ELLA+FLR G +GK+VL ++ +++++ GSL L Sbjct: 6 LQELPSQSLPREKLLRQGRHSLSNAELLAIFLRMGIKGKNVLDMSSDLIQSAGSLDALAH 65 Query: 61 SEYEQFSGV-HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 E + + + GIG+AK A L EL R + + P+ +PE ++L + + +E Sbjct: 66 MEAAEIANICKGIGMAKAATLSAAFELGARALRETLSRQ-PIQTPEDVYDYLTTAMRWKE 124 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 +E +V+ LD++ R+I + SGTLN HPR+I+R + NA ILAHNHPSG Sbjct: 125 KETVLVLLLDTKCRLIKPVEISSGTLNESIAHPRDILRPTVIHNAYGFILAHNHPSGNPA 184 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGR------GEYVSF 216 PS+ D L+TER+ + + + +R LDH++IG+ Y S+ Sbjct: 185 PSRTDDLLTERVRECSKLLGVRFLDHVIIGKPTETTNKNYYSY 227 >UniRef50_C6BYC2 DNA repair protein RadC n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BYC2_DESAD Length = 225 Score = 220 bits (562), Expect = 2e-56, Method: Composition-based stats. Identities = 70/225 (31%), Positives = 114/225 (50%), Gaps = 3/225 (1%) Query: 1 MKNNSQLLMPREKM-LKFGISA--LTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYG 57 MK+ R+++ K G + L D E+L L L +D LAKE+L FG L G Sbjct: 1 MKDKPHYYGHRQRLKEKLGKDSTSLADYEILELLLGQVLPRRDTKPLAKELLAEFGGLSG 60 Query: 58 LLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTG 117 + + EQ GIG + E R M + + SP++ + +++ Sbjct: 61 VFRAPEEQLKKFKGIGPGVLIFFTLMREFWTRIAEEPMNGKEAISSPDVVYKAAMARIGN 120 Query: 118 EEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGC 177 +E F + ++++++VI RL GT++ V+PRE++ A++ NAS +IL HNHP G Sbjct: 121 LSKEEFWIALVNNRNKVICWERLSEGTVDKTAVYPREVVALALRHNASGVILTHNHPGGD 180 Query: 178 AEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS D T I CQ M++R+LDH+++ + SF E G++ Sbjct: 181 PSPSPEDTERTMEIAALCQDMEIRLLDHVIVTADRFHSFKEAGYL 225 >UniRef50_C8VVH2 DNA repair protein RadC n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VVH2_DESAS Length = 227 Score = 220 bits (562), Expect = 2e-56, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 117/211 (55%), Gaps = 6/211 (2%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 RE+ L +G S L D EL+ L L A ++ + GL+ EQ + V Sbjct: 22 RERGLNYGTSVLNDAELVMTLLGIN------LEKAMNLINIINGIRGLMDVSVEQLAEVK 75 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+G +K LK E+ +R + E + +P+ ++ ++ +RE F + L++ Sbjct: 76 GVGNSKALALKAAVEIGQRIAKTKAMECPSVKTPDDAVNYVMEEMRYMDREHFKALLLNT 135 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++RVI+ + GTLN VHPRE+ + AIK +A+A+IL HNHPSG PS+ D +TER Sbjct: 136 KNRVISLEAISVGTLNSSNVHPRELFKVAIKRSAAAIILIHNHPSGDPTPSREDIDVTER 195 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 + ++ + + + VLDHIVIG G++VS +G Sbjct: 196 LGEAGKIVGIDVLDHIVIGDGKFVSLKAKGL 226 >UniRef50_A4W1K3 UPF0758 protein SSU98_1084 n=76 Tax=Streptococcus RepID=Y1084_STRS2 Length = 246 Score = 220 bits (561), Expect = 3e-56, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 128/216 (59%) Query: 4 NSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEY 63 + +PRE++++ G L++ ELLA+F+RTGT+ + V L+ ++L SL L Sbjct: 7 KEEAFLPRERLVEVGAERLSNQELLAIFIRTGTKKEPVSILSNKLLNRLESLAALRELSI 66 Query: 64 EQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIF 123 E+ + GIG K ++K + EL +R + +L E + ++ +++E Sbjct: 67 EELQSLTGIGRVKAIEIKAMIELGKRINQSELLLNERILGSEKLGRKMIHEIGHKKQEHL 126 Query: 124 MVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKA 183 + ++L++Q+++I+ + +F G++N PREI+ A+K A+++I+ HNHPSG +PS+ Sbjct: 127 VALYLNTQNQIISQKTIFIGSVNRSIAEPREILHYAVKCMATSIIIVHNHPSGSVQPSRN 186 Query: 184 DKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAER 219 D L TE + +SC+ + L +LDH+++G +Y SF E Sbjct: 187 DLLFTENLKESCEKLGLVLLDHLIVGNKDYYSFREE 222 >UniRef50_Q2LSS5 DNA repair protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSS5_SYNAS Length = 308 Score = 220 bits (561), Expect = 3e-56, Method: Composition-based stats. Identities = 74/212 (34%), Positives = 122/212 (57%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 ++K K G+ AL D E + L L KD+ +L+K++LE FGSL G++ +E E+ + V Sbjct: 95 KKKFFKCGLQALHDYEAVELLLSYAIPRKDIKSLSKDLLERFGSLKGIMDAELEELTAVR 154 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 GI ++ + E++ Y + RE+ + +F ++ L G + E F V++LD+ Sbjct: 155 GISAHAAGLVRMVKEMSALYLQEKAREKPQISCTGELLDFCKTALGGLKDENFCVLYLDT 214 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 Q+R+I + G +N V+PR++I A+ +SALIL HNHPSG +PS AD +T Sbjct: 215 QNRIIAFETIQKGIVNQAVVYPRQVIERALSHKSSALILVHNHPSGFVKPSDADIRLTRT 274 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 I + + +D+ V DH++IG + SF E G + Sbjct: 275 ITDTAKLLDIMVHDHLIIGENRFFSFREEGIM 306 >UniRef50_B1YJT0 DNA repair protein RadC n=2 Tax=Exiguobacterium RepID=B1YJT0_EXIS2 Length = 217 Score = 219 bits (559), Expect = 5e-56, Method: Composition-based stats. Identities = 73/213 (34%), Positives = 127/213 (59%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 P++ + G++ T VELLA +R+GTR + L +A+++LE + SL L + Sbjct: 5 PKDMIQLKGLAQATTVELLACLVRSGTRNRCPLEIAEDLLEIYPSLIELEAAGVGGLEKA 64 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+G AK Q+ EL RR + SP+ E L ++ ++E F+ ++L+ Sbjct: 65 PGVGKAKALQIMAGLELGRRLVTEPKWVRPVVRSPDDAAELLMEEMRLYQQEHFICLYLN 124 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 +++ VI+ + LF G LN VHPR+I REAI+ +A++ I HNHPSG PS+ D ++E Sbjct: 125 TKNEVISKKTLFIGGLNTSIVHPRDIFREAIRCSAASFIAVHNHPSGDPTPSREDIEVSE 184 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 R++++ + + + +DH+VIG G+++S +RG++ Sbjct: 185 RMVEAGRLIGISCIDHLVIGHGQFISMKQRGFM 217 >UniRef50_C0BG63 DNA repair protein RadC n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BG63_9BACT Length = 232 Score = 219 bits (558), Expect = 6e-56, Method: Composition-based stats. Identities = 67/223 (30%), Positives = 116/223 (52%), Gaps = 1/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGS-LYGLL 59 +K+ PREK+ G S L++ EL A+ + G+ + + L K +L + + L Sbjct: 10 IKDWDVSDRPREKLKSQGASYLSNAELFAVLIGYGSSSESAVGLMKRILLSINNDLQKFD 69 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 E+ GIG K +LK + EL++R+ + + + L S ++ E + L Sbjct: 70 QLPIERLVEFKGIGEVKAIKLKAVVELSKRFQKQQPDKTTVLNSSKIVYESIYMDLDTLP 129 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 E F +++L+ +R++ RL G + V R + A ++ A+ LILAHNHPSG Sbjct: 130 HEEFWILYLNQSNRLLEKYRLSKGGITQTTVDLRLAFKRAFEVGATGLILAHNHPSGGLT 189 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS +D+ IT + + +DLR+LDH+++ + Y SFA+ G + Sbjct: 190 PSSSDEQITRKFKLAAASVDLRILDHLIVSKKGYFSFADEGLL 232 >UniRef50_Q2J299 UPF0758 protein RPB_0700 n=15 Tax=Alphaproteobacteria RepID=Y700_RHOP2 Length = 250 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 115/200 (57%) Query: 18 GISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKF 77 G +AL+D ELL L L +DV LAK ++ FGS + + + V G+G A Sbjct: 46 GAAALSDYELLELVLFRALPRRDVKPLAKALIARFGSFAETMQAPEPRLREVSGLGEAAI 105 Query: 78 AQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITH 137 ++K +A A R +++ + L S ++ ++ + +RE F ++FLD ++++I Sbjct: 106 TEIKLVAAAAARVTKGQVKSRTVLSSWSAVIDYCRTTMAFADREQFRILFLDKRNQLIAD 165 Query: 138 RRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQF 197 GT++H V+PREI++ A++++A+A+I+ HNHPSG PS+AD +T+ I+ + Sbjct: 166 ELQQVGTVDHTPVYPREIVKRALELSATAVIMVHNHPSGDPTPSQADIQMTKTIVAIAEP 225 Query: 198 MDLRVLDHIVIGRGEYVSFA 217 + + V DHI++G+ + S Sbjct: 226 LGVAVHDHIIVGKNGHASLK 245 >UniRef50_B2V8J4 DNA repair protein RadC n=5 Tax=Aquificales RepID=B2V8J4_SULSY Length = 229 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 75/222 (33%), Positives = 126/222 (56%), Gaps = 4/222 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K + ++PREK LK G S L+D ELLA+ L +GT+G +V+ LA+++L S L Sbjct: 12 IKELPKDMLPREKALKGGFSFLSDEELLAISLGSGTKGINVIGLAQKILNG-KSFKDLKD 70 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + GIG AK Q+ I E+A+R E+ + S +L+ L+ E + Sbjct: 71 ITLDDLKKIKGIGEAKALQILAIIEIAKRM--DDHAEKIKITSVSDAFNYLK-FLSKETQ 127 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E + ++L+S + +I + G+LN V V PR+I+ AIK N + +I++HNHP+ P Sbjct: 128 EHMVALYLNSSNHLIAQEVIAKGSLNVVRVLPRDILYYAIKHNCNGIIISHNHPNNDPTP 187 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S+ D T+++ + +LDHI++G+ ++ SFA+ G I Sbjct: 188 SQEDIEFTKKLQTLANELGFDLLDHIIVGKKDFYSFAKAGLI 229 >UniRef50_C8NZ93 DNA repair protein RadC n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZ93_ERYRH Length = 235 Score = 218 bits (555), Expect = 1e-55, Method: Composition-based stats. Identities = 81/212 (38%), Positives = 125/212 (58%) Query: 6 QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQ 65 +PREK+L G + LTD EL+A+ LRTGTR K+V++LA E+L + G + L+ +Y Q Sbjct: 15 SQFLPREKLLVLGPNKLTDEELVAILLRTGTRNKNVVSLASEVLTSIGGIQNLIKIQYSQ 74 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMV 125 S + G+ AK L + EL RR E+ L S + +L ++ EE+E+F V Sbjct: 75 LSKIKGMKQAKCTTLLAVHELLRRIVMPFPGEKIKLSSCDRIVRWLNLEIGFEEQELFRV 134 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 +FL +Q+ +I + LF GT + VHPR++ REA++ NAS ++L HNHP G S+AD Sbjct: 135 LFLSTQNNLIRYLDLFKGTADKSLVHPRDVFREAVRCNASRIVLVHNHPGGSLSASEADV 194 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFA 217 +T +I+ + + V+DHI++ VS Sbjct: 195 EVTRALIEVGMMIGIEVVDHIIVTSTNSVSLR 226 >UniRef50_A6Q5Q5 DNA repair protein RadC n=2 Tax=unclassified Epsilonproteobacteria RepID=A6Q5Q5_NITSB Length = 220 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 74/222 (33%), Positives = 129/222 (58%), Gaps = 6/222 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 + + PREK+L+ G AL D EL+A+ L +G +GKDV+ L+KE+++ F + + Sbjct: 5 INELEKFEKPREKLLEKGAKALKDYELVAILLGSGVKGKDVIKLSKEIIKLFQQDFDAIN 64 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 E+ +H +G+AK AQ+ EL++RY ++ ++S E L+ +++ Sbjct: 65 --IEKLLQIHELGIAKAAQIVSAVELSKRYL---FKQHKTVISANDVYEELKEYF-DKKQ 118 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+ +LD +R+ R + GTLN VHPRE+ AI+ +++I+AHNHPS P Sbjct: 119 EYFIAFYLDGANRICEKRVITIGTLNQSLVHPREVFAPAIESRCASIIVAHNHPSNNLTP 178 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S+ D L+T+++ +S + + + +LDHI+ + +VS E G + Sbjct: 179 SREDILVTQKLKQSGKILGIELLDHIIFSKEGFVSLQEEGIL 220 >UniRef50_Q5WTW4 UPF0758 protein lpl2409 n=6 Tax=Legionella RepID=Y2409_LEGPL Length = 227 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 92/218 (42%), Positives = 141/218 (64%), Gaps = 1/218 (0%) Query: 5 SQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYE 64 +Q L REK+L G+ +L+D+ELLA+F+ +G K L LA E+ ++ G+L +L ++ + Sbjct: 7 AQQLDLREKLLTNGVHSLSDIELLAVFISSGNNKKSCLQLAYELTKHLGNLRNILNADLQ 66 Query: 65 QFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFM 124 F +HG+G ++AQL+ E+ R + +++E L + + T FL+ +L + E F Sbjct: 67 SFKSIHGLGEVRYAQLQAAKEICHRSDFIDLQKEIRLSNTQQTYAFLKKRLRDYKNETFA 126 Query: 125 VIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKAD 184 +FLD+QHR+I + LFSGT+N V+PR I+ +++NA+ALILAHNHPSG ++ S+ D Sbjct: 127 ALFLDNQHRIIAYEELFSGTINTATVYPRPIVERVLQLNAAALILAHNHPSGLSDASQQD 186 Query: 185 KLITERIIKSCQFMDLRVLDHIVIGRGEYVS-FAERGW 221 ITERI + +D R+LDHIVIG E S FAE W Sbjct: 187 LAITERIRDALDLVDARLLDHIVIGDNEVYSIFAENKW 224 >UniRef50_O67541 UPF0758 protein aq_1610 n=2 Tax=Aquificaceae RepID=Y1610_AQUAE Length = 231 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 78/222 (35%), Positives = 132/222 (59%), Gaps = 5/222 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K + L PREK+LK G L+D ELLA+ L +G++G DVL+L+KE+++ L Sbjct: 15 LKEIPEELRPREKLLKLGPENLSDEELLAVILGSGSKGADVLSLSKELIKM--GWEELEK 72 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 E+ V G+G+ K Q+K + EL++R+ + R + +P+ EFL+ + E R Sbjct: 73 KSVEELLKVRGLGLVKALQVKALVELSKRFKGGKSR--ISIRNPQEAFEFLKDKF-DERR 129 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E + ++LD +R++ + G +N V P++I+ +A+K++A+ +I+AHNHP G P Sbjct: 130 ESLIALYLDLSNRLLDWEVVAIGNVNTVFSKPKDILFKAVKLSANGIIIAHNHPQGEPSP 189 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S D TER+ K+C+ + +LDH+++ G Y SF E G + Sbjct: 190 SNEDLNFTERLKKACELLGFELLDHLILSEGRYFSFREEGVL 231 >UniRef50_B0S3Y4 UPF0758 protein FMG_0357 n=2 Tax=Finegoldia magna RepID=Y357_FINM2 Length = 223 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 70/217 (32%), Positives = 120/217 (55%), Gaps = 1/217 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K ++ L PREKM GIS+++D EL+ + L+TG + + V L+K +++ Sbjct: 3 VKEMNESLRPREKMKINGISSMSDEELMQIILKTGIKEEGVEILSKRVIDYINE-NDYKD 61 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 E+ + GIG+AK + E+ RR + + L P+ E +++ + Sbjct: 62 LCVEELMKIKGIGMAKATSILAGIEIGRRLSLRKAMDSFSLNDPDSVAEIFCNEIGSCDV 121 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F + LD+++R+I+ + GT+N VHPRE+ + AIK A+++IL HNHPSG P Sbjct: 122 ENFYALLLDTKNRIISKELISKGTINQSIVHPREVFKSAIKKGANSIILVHNHPSGSLIP 181 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFA 217 S AD +T+R+ K + ++VLDHI++ + +S Sbjct: 182 SNADIEVTKRLDKVGDLVGIQVLDHIIVSSNDSLSMR 218 >UniRef50_C4V569 DNA repair protein RadC n=2 Tax=Selenomonas RepID=C4V569_9FIRM Length = 225 Score = 216 bits (552), Expect = 3e-55, Method: Composition-based stats. Identities = 77/224 (34%), Positives = 121/224 (54%), Gaps = 3/224 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENF--GSLYGL 58 + S +PRE++L G + L+D ELLA+ LRTG G++VL LA+ + F L + Sbjct: 3 LSELSPGELPRERLLAHGAAVLSDAELLAVLLRTGRAGENVLDLARGIAARFREEGLAAI 62 Query: 59 LTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGE 118 L +F+ + GIG AK A + EL RR Y R + L ++ E Sbjct: 63 LRMPAAEFARIPGIGSAKAATVLAALELGRRAYAG-TRGMPRMNEAADVAALLSARCQAE 121 Query: 119 EREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCA 178 RE F V+ L +++ V+ + +GTL + VHPRE+ AI+ +A+ +I+AHNHPSG Sbjct: 122 RREHFFVLPLSAKNEVLMIADVSTGTLTNTLVHPREVFEPAIRCSAAHIIIAHNHPSGDP 181 Query: 179 EPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS D +T + ++ + + V DH+++ R + SFAE G + Sbjct: 182 APSAEDHRLTRSLHEAGALLGIPVADHVIVARDGFFSFAEAGLL 225 >UniRef50_D2RM81 DNA repair protein RadC n=2 Tax=Acidaminococcus RepID=D2RM81_ACIFE Length = 220 Score = 216 bits (550), Expect = 5e-55, Method: Composition-based stats. Identities = 71/217 (32%), Positives = 112/217 (51%), Gaps = 1/217 (0%) Query: 7 LLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT-SEYEQ 65 PRE++L G ALT ELLA+ + TG + L +A+E+ + L + + Sbjct: 4 EERPRERLLAKGPEALTITELLAILIGTGRKDHSALDIARELTGDLLKDARLARTQDVRE 63 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMV 125 + + GIG AK + EL RR R + PE + +L E E F+V Sbjct: 64 LTRISGIGPAKATVILAALELGRRLAGAGTRPFRTIHCPEDGAMLVMPRLRYENHEHFLV 123 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 + L+S+ +VI + G+LN VHPRE A+ +A+A++ HNHPSG PS+ D+ Sbjct: 124 VLLNSKGKVIGIEPVSEGSLNASVVHPREAFAPALLHHAAAILAVHNHPSGDPTPSREDR 183 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +T + + + M + ++DH++IG G Y SF E G + Sbjct: 184 ELTRTLWDTGKVMGIPLVDHLIIGDGVYYSFKEHGLL 220 >UniRef50_Q8DI83 UPF0758 protein tlr1707 n=31 Tax=Cyanobacteria RepID=Y1707_THEEB Length = 250 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 78/226 (34%), Positives = 120/226 (53%), Gaps = 10/226 (4%) Query: 3 NNSQLLMPREKMLKFGISALTDVELLALFLRTGTR--GKDVLTLAKEMLENFGS------ 54 + PREK+L G L+ ELLA+ L TG + L + +L+ G Sbjct: 10 DLPAGDRPREKLLSQGARYLSSAELLAILLGTGQGAGKLSAVGLGQFILKQLGERTGDST 69 Query: 55 --LYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQ 112 + L E+ + G+G AK + EL +R + R E++ + SP + L Sbjct: 70 DAVSALRDITPEELMAIPGVGPAKATTILAAVELGKRVFQSRPGEQTIIDSPALAAAVLA 129 Query: 113 SQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHN 172 + L + E F V+ LD +HR++ + GT HPREI REA++ NAS LI+AHN Sbjct: 130 ADLMWQATERFAVLLLDVRHRLLGSHVITVGTATETLAHPREIFREAVRRNASRLIIAHN 189 Query: 173 HPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAE 218 HPSG PS+AD +T++I+++ Q M++ VLDH+++G G+Y S E Sbjct: 190 HPSGNLSPSQADLDLTKQILQAGQLMEIPVLDHLILGNGDYQSLRE 235 >UniRef50_C9LLN8 DNA repair protein RadC n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLN8_9FIRM Length = 227 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 70/226 (30%), Positives = 121/226 (53%), Gaps = 5/226 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG---SLYG 57 +K PRE+ K + V+L+A+ LRTG G V+ +A+E++E + G Sbjct: 3 IKEMRSEDKPRERFAKA-PDTASMVDLVAILLRTGRHGCSVMDMAQEVVEQIRLSTDVNG 61 Query: 58 LLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLS-PEMTREFLQSQLT 116 ++ V G+G K + EL RR +++ S PE + +L Sbjct: 62 FDNLDWRDLISVKGVGQDKAITVCAAVELGRRLAQFHNKKQLENFSFPEAVASYFMEKLR 121 Query: 117 GEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSG 176 E++E F+V FL++++R++ ++ + G+L+ V +E +R A++ A +IL HNHPSG Sbjct: 122 HEDQEHFIVCFLNTKNRLLGYKEICVGSLDAAPVDIKEAMRWALRFKAHGMILVHNHPSG 181 Query: 177 CAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 EPS AD +T + ++ F D+R+LDH++IG GE+ S + G + Sbjct: 182 YPEPSDADINLTRQFRRATSFFDIRLLDHVIIGDGEFASLNKNGLV 227 >UniRef50_A1UT15 DNA repair protein, RadC family n=3 Tax=Bartonella RepID=A1UT15_BARBK Length = 265 Score = 213 bits (544), Expect = 3e-54, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 117/212 (55%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 R++ L +A+ D E L L L D +AK+++E FGSL +L ++ + + Sbjct: 54 RKRFLDTKGNAIEDYEYLELLLFRTIPRADTKPIAKKLIERFGSLADVLGADIHRLQEIE 113 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G G A LK I+ +A R+ ++ + S + + ++ + E RE F ++FLD Sbjct: 114 GCGPASAIDLKIISAVAGRFARAQLSKRDIFSSWDKVLAYCKAVMAHETREQFRILFLDK 173 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 +H +++ +GT++ V+PRE++ A++++AS +IL HNHPSG A PS+ D +T R Sbjct: 174 KHGLLSDEVQQTGTIDRTPVYPREVVSRALELSASGIILVHNHPSGDASPSQEDISMTYR 233 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + +D+ + DH++I R +Y+SF I Sbjct: 234 LKDVANALDITLHDHLIIARNDYISFKALKLI 265 >UniRef50_C7TC16 DNA repair protein n=8 Tax=Lactobacillus RepID=C7TC16_LACRG Length = 222 Score = 213 bits (543), Expect = 3e-54, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 117/211 (55%) Query: 7 LLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQF 66 PRE++L G ALTD ELL L +R G + V + E+L + +L GL + + Sbjct: 5 TEQPRERLLAHGPQALTDAELLQLIVRAGNQHYPVQEIVSEVLTTYPALRGLAEGDGDSL 64 Query: 67 SGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVI 126 + G+G AK A + EL RR + + + E + + S+ G +E +++ Sbjct: 65 DHIRGLGAAKRASILAGVELGRRVMRRQSVRYGQIKNSEQLGKTMVSRFAGANQESMLIL 124 Query: 127 FLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKL 186 FLD ++++IT + + GT++ PR + REA+K++A+ LI+ HNHPSG PS+AD+ Sbjct: 125 FLDVKNQIITEQIVAIGTVDSALADPRVVFREALKLSATNLIMVHNHPSGDPSPSQADRD 184 Query: 187 ITERIIKSCQFMDLRVLDHIVIGRGEYVSFA 217 T R + + + +LDH++IGR Y SFA Sbjct: 185 TTTRFQLAAALLGMHLLDHLIIGRQSYYSFA 215 >UniRef50_B9MPC4 DNA repair protein RadC n=2 Tax=Clostridia RepID=B9MPC4_ANATD Length = 232 Score = 213 bits (542), Expect = 5e-54, Method: Composition-based stats. Identities = 68/216 (31%), Positives = 117/216 (54%), Gaps = 4/216 (1%) Query: 11 REKM----LKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQF 66 RE++ ++ G+ D ++L L L KD +A ++ FGS+ + + ++ Sbjct: 12 RERLKRRFIEQGLDGFEDHQVLELLLFFSIPRKDTNEIAHRLISTFGSISNVFEAHPKEL 71 Query: 67 SGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVI 126 V G+G + I++++RRY + R+ L + E E+++S G + E+F VI Sbjct: 72 QKVKGVGENSAILISLISQISRRYLADKNRKTFQLRNVEAAAEYIKSLFVGRKNEVFYVI 131 Query: 127 FLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKL 186 LD+Q VI LF GT+ V+PR+++ I+ NAS++ILAHNHP G PS D Sbjct: 132 CLDTQLNVIYSVPLFEGTVKEAVVYPRKVVECVIRYNASSVILAHNHPGGSVRPSMDDIK 191 Query: 187 ITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 T++I+ + + + V DH ++ + EY SFA+ G + Sbjct: 192 TTQKIVNALSTIGVAVNDHFIVAKDEYYSFAQNGML 227 >UniRef50_C0Q9Z9 RadC3 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9Z9_DESAH Length = 279 Score = 212 bits (541), Expect = 6e-54, Method: Composition-based stats. Identities = 74/212 (34%), Positives = 119/212 (56%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 +++ L GIS D E++ L L T KD AK +L+ F +L G+ + E+ V+ Sbjct: 56 KQRFLANGISGFLDYEVIELLLTLNTPRKDCKPSAKALLDRFKTLQGVFEASVEELCRVN 115 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+G + +K I ++ RY R+R ++ L + FL + RE+F+ IFLD+ Sbjct: 116 GVGPSNVLGIKLIKAVSDRYLEQRIRSKTVLKNSHDLCAFLGHAIGHRPREVFVGIFLDA 175 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++RV+ LF G+L+ V+PRE+I +A++ A+ALI AHNHPSG PS D IT R Sbjct: 176 KNRVLASEILFEGSLSSSAVYPREVIAKALEHRAAALIFAHNHPSGETSPSPEDLAITRR 235 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + + + V +H++ G + SFA++G I Sbjct: 236 LFFALAHAGITVHEHLITGGERFYSFADQGII 267 >UniRef50_B0N2U6 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N2U6_9FIRM Length = 225 Score = 212 bits (541), Expect = 6e-54, Method: Composition-based stats. Identities = 76/222 (34%), Positives = 120/222 (54%), Gaps = 1/222 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +KN PREK GI +L ++ELLAL LRTG + + + LA+ ++ G L Sbjct: 3 LKNYPLEERPREKAFHHGIESLNNIELLALVLRTGNKQESAIELAQRVINEIGGFRYLHD 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 Y Q + GI AK ++ I E+A+R + S + P E L++QL E++ Sbjct: 63 INYYQLIQIKGIKQAKAIEVLAIIEIAKRLDKQPV-AMSAIKEPRDGYELLKNQLMFEQQ 121 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E +V+ L+S+ VI + +F G N + RE+ +EA+ ++ +++ HNHPSG EP Sbjct: 122 EKVIVLCLNSRLEVIKEKTVFIGGNNISIISGRELFKEALICGSNRVMVVHNHPSGNPEP 181 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S D TER+ + +D+ V+DH++IGR + SFA I Sbjct: 182 SIEDIEATERLYSMAKELDIDVVDHLIIGRSRFYSFASNKII 223 >UniRef50_D1W0Q6 Putative DNA repair protein RadC n=2 Tax=Prevotella RepID=D1W0Q6_9BACT Length = 259 Score = 211 bits (539), Expect = 9e-54, Method: Composition-based stats. Identities = 67/218 (30%), Positives = 114/218 (52%), Gaps = 1/218 (0%) Query: 4 NSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLL-TSE 62 ++ PREKM + G SAL+ ELLA+ + +G+ + + L K +L + + L Sbjct: 39 WAEADRPREKMERLGASALSPAELLAILIGSGSVDESAVDLMKRLLNDCNNNLNTLGKQT 98 Query: 63 YEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREI 122 ++ + GIG AK + EL +R + E + L S E++ ++ + E Sbjct: 99 IQELTNYKGIGPAKAITILAACELGKRRAMEKAEERADLSSALAIYEYMHPRMQDLDVEE 158 Query: 123 FMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSK 182 ++ ++ ++++I R+ G ++ V R I+REA+ NA+ L L HNHPS A PS Sbjct: 159 AWILLMNQRYKLIKAMRISHGGISETAVDVRVIMREAVLSNATVLALCHNHPSNQAFPST 218 Query: 183 ADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 D +T+RI ++ Q M + LDHI++ G Y S+ E G Sbjct: 219 EDDRLTKRIHEASQLMRIYFLDHIIVTDGRYYSYREEG 256 >UniRef50_D1U9S4 DNA repair protein RadC n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9S4_9DELT Length = 227 Score = 210 bits (536), Expect = 2e-53, Method: Composition-based stats. Identities = 81/212 (38%), Positives = 115/212 (54%), Gaps = 1/212 (0%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 REK+L+ AL D E+L L L +D LAK M+E FGSL L + +Q + Sbjct: 17 REKLLRDS-RALADYEILELALAAIIPRRDTKPLAKLMIERFGSLKDALMARPDQLEAIS 75 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 GIG A A EL R R R +PL P +++ + E F F+DS Sbjct: 76 GIGPAAVAHWALTQELFARMGEARTRSGAPLSDPAEVARAAMARIGSKGVEEFWAAFMDS 135 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++RVI ++ GT++ V PREI+ A+++ A+ALILAHNHP G PS+ D +T R Sbjct: 136 KNRVIAWEQVSKGTVDATPVFPREIMVTALRLEAAALILAHNHPGGDPTPSREDLDLTRR 195 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 I + Q + +R+LDHI++ EY SF E G + Sbjct: 196 IRDTAQGLGIRILDHIIVTDHEYYSFNEHGRL 227 >UniRef50_Q0BRK0 DNA repair protein radC n=5 Tax=Alphaproteobacteria RepID=Q0BRK0_GRABC Length = 271 Score = 210 bits (536), Expect = 2e-53, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 122/212 (57%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 R+++L G AL D E+L + L +D LAK++L +FGS ++++ + + + Sbjct: 60 RQRLLTHGPEALADYEMLEMLLFLALPRRDTKPLAKDLLNHFGSFAAVISASPRELTTIK 119 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+G A A L + + R + L + E +L + L E+ E F V+FLD+ Sbjct: 120 GVGEAGAAALALVRAASLRLLRADAVAQPVLNNWERLIAYLNASLAREKNEQFRVLFLDN 179 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++++I L GT+NH V+PRE+++ A++++A+ALI+ HNHPSG PS D +T Sbjct: 180 RNQLIADEILAHGTVNHAPVYPREVVKRALELHATALIVVHNHPSGDPTPSAEDIRMTRE 239 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + ++ + + L + DH++IGR + SF ++G + Sbjct: 240 LREAGRLLSLDLHDHVIIGRHGWSSFRKQGLL 271 >UniRef50_C4XRP2 DNA repair protein RadC n=4 Tax=Desulfovibrionales RepID=C4XRP2_DESMR Length = 228 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 121/212 (57%), Gaps = 1/212 (0%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 ++++L AL E+L L L +D LAKE+L FGSL G+LT+ +E+ GV Sbjct: 18 KDRLLDD-PRALAKYEVLELVLGYVNVRRDNKPLAKELLARFGSLRGVLTARFEELRGVP 76 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G G L E+ R++ MR+ + L SP++ E ++++ +E E F + +D+ Sbjct: 77 GFGAGAEEFLTLWREVWARFHEQPMRDRAVLGSPDVVAEMARARIGVKEHEEFWMALVDT 136 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++R++ R+ GT++ V+PRE+I A++ NAS +IL HNHP +PS D T R Sbjct: 137 KNRLVGWERVSKGTVDQAAVYPREVIAMALRYNASGVILVHNHPGADPKPSAEDMAFTRR 196 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 I+ + + MD+RVLDH+V+ + SF G I Sbjct: 197 IVAAAREMDIRVLDHLVVTENRFFSFQAEGMI 228 >UniRef50_C0GMV6 DNA repair protein RadC n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GMV6_9DELT Length = 226 Score = 210 bits (534), Expect = 4e-53, Method: Composition-based stats. Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 3/215 (1%) Query: 11 REKM---LKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 R+++ L S+L D E+L L L KD LAK +L + + LL + Sbjct: 12 RQRLKKRLDNDPSSLQDYEILELVLGYALPRKDTKPLAKALLNRYPTFKDLLAARPGDLQ 71 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 + GIG + E R + S L SPE +S+L + E F I Sbjct: 72 AIDGIGPGIITFFRLWGEFWARTDRSGLSTRSTLDSPEKVARLARSRLQFKSIEEFWAIM 131 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 +D+++R+I ++ GT++ V PREI+ A++ AS +IL HNHP G PS D+ + Sbjct: 132 VDNKNRLIDFEKMSRGTVDQAPVFPREILTVALEKRASGVILLHNHPGGDPHPSFQDREL 191 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 T +I + + +R+LDH++I + SF E G++ Sbjct: 192 TRKIREVSTALGVRLLDHVIISEDSFFSFQEHGFL 226 >UniRef50_C8N8A0 DNA repair protein RadC n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N8A0_9GAMM Length = 224 Score = 209 bits (532), Expect = 6e-53, Method: Composition-based stats. Identities = 88/217 (40%), Positives = 125/217 (57%), Gaps = 1/217 (0%) Query: 5 SQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYE 64 + MPRE+ML G AL D ELLA+ LRTG++G +VL ++E+L G L GL S Sbjct: 6 NSTDMPRERMLHNGAQALADYELLAILLRTGSKGSNVLEFSRELLRGRGGLVGLFNSRAA 65 Query: 65 QFSGVHGIGVAKFAQLKGIAELARRYYNVRMREES-PLLSPEMTREFLQSQLTGEEREIF 123 V G+G AK A++ + ELARR+ MR+ S + R++L Q G+ E F Sbjct: 66 DLQAVRGLGKAKTAEILAVTELARRFMREEMRQPSWSFKTAADVRDYLLMQFKGQALEAF 125 Query: 124 MVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKA 183 V+FL+ QH I RL +G V V R++I A+ +A+A+ILAHNHP+G PS Sbjct: 126 GVLFLNQQHGFIAFERLAAGAAAKVPVPVRQLIASALHHHAAAVILAHNHPAGSGAPSAE 185 Query: 184 DKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 D+ +T + + MD+R+LDH ++ E VS ERG Sbjct: 186 DRDVTRHLDDALALMDIRLLDHFIVAGNEMVSMRERG 222 >UniRef50_A9NF52 DNA repair protein n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NF52_ACHLI Length = 217 Score = 208 bits (531), Expect = 9e-53, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 118/210 (56%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 + PREK+++ G+ AL D EL+A+ LRTG +DVL LAK++L + +L E Sbjct: 1 MKPREKLIQHGVRALEDYELIAILLRTGNTKEDVLLLAKKVLSQLDNFEDMLHITVEDLL 60 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 ++GI AK + EL RR + + + L+ ++ +E +V+ Sbjct: 61 TIYGISDAKATTIIAAVELGRRLSDRKKPVRKMITESSEVYHLLKEDMSYLRKEHLIVLC 120 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 LD + ++ + ++ GT + ++V +++ + A++I A +I+ HNHPSG + PS+AD + Sbjct: 121 LDIKGNLLKNETIYMGTTSSIQVSVKDLFKSAVRIGAFGIIVVHNHPSGDSTPSQADDKL 180 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFA 217 T+ I + + + + ++DHI+IGR E+ S+ Sbjct: 181 TKLIKNAGEVLSIELIDHIIIGRNEFFSYR 210 >UniRef50_A5EYF9 Response regulator receiver domain protein-DNA repair protein RadC n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EYF9_DICNV Length = 401 Score = 208 bits (529), Expect = 1e-52, Method: Composition-based stats. Identities = 75/224 (33%), Positives = 127/224 (56%), Gaps = 4/224 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 + ++ L MPRE++L+ G SAL+D ELLA+ LRTG GK VL A+E++ + G L GLLT Sbjct: 176 ITSDPSLDMPRERILRLGASALSDAELLAILLRTGVIGKPVLAFAQELIASRGGLVGLLT 235 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMR-EESPLLSPEMTREFLQSQLTGEE 119 S E + GIG AK A++ + EL +R+ ++ E S + R FL G Sbjct: 236 SRKEHLLPIKGIGQAKTAEILAVTELCKRFIAADLQLPEWQFSSADDVRNFLLMHYKGLG 295 Query: 120 REIFMVIFLDSQHRVITHRRL---FSGTLNHVEVHPREIIREAIKINASALILAHNHPSG 176 E ++ L+ +++ + + R+ F ++ V V R++++ + +A+A++L HNHP+ Sbjct: 296 FEEVAILLLNQKNQYLAYERIGQAFGSEVSQVNVSCRKLVKSVLDSDAAAVVLVHNHPAQ 355 Query: 177 CAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 E S++D T+ I + + +R+LDH V+ + +S E G Sbjct: 356 STELSESDLQTTKFIENFLKPLGVRLLDHFVVAGNQVISLRETG 399 >UniRef50_Q2G8R8 DNA repair protein RadC n=5 Tax=Sphingomonadales RepID=Q2G8R8_NOVAD Length = 245 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 121/212 (57%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 R++++ G AL D E++ L D +A+ +++ FGSL G+L ++ + + Sbjct: 34 RKRLMAGGEDALADHEVIEYLLMVARPRIDTKPIARSLVQRFGSLAGVLNADPQALALHP 93 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 +G A L+ +A ARR +RE+ L + + ++L + E V++L+S Sbjct: 94 NMGETSAAALRIVALAARRLARTVVREQPILSNWQALLDYLHIDMAHLTVERVRVLYLNS 153 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 Q+ +I + GTL+ ++ RE+IR+A+ + A+A+IL HNHPSG +PS+AD +T++ Sbjct: 154 QNMLILDHLVSEGTLDESPIYTREVIRKAMDVGAAAMILVHNHPSGSPKPSRADIQVTQK 213 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++++ + M + V DHIVIGR + S +G I Sbjct: 214 VMEAARLMGMTVHDHIVIGREGHTSLKAQGLI 245 >UniRef50_Q1RK76 DNA repair protein RadC n=11 Tax=Rickettsia RepID=Q1RK76_RICBR Length = 249 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 113/212 (53%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 +E+ + G + +D ELL L L + KDV LAK++LENF S+ L+ + E+ + Sbjct: 38 KERFVTSGAANFSDYELLELMLFSSIPRKDVKPLAKKLLENFNSITDLINIDKERLLSIS 97 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G + + EL R ++ ++ + S ++L+ + E F V+FL+ Sbjct: 98 GTNENLYINFAIVRELINRALKQKIINKNIIASWGSLIDYLKVNMGNMRLEQFRVLFLNK 157 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++ +I L GT++ V+PREII+ A+ AS +IL HNHPSG +PSKA +T Sbjct: 158 KNILIADEVLSQGTIDQAAVYPREIIKRALFNEASNIILVHNHPSGSPDPSKAGIDMTNI 217 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 I+ C+ +++ V DH++I +Y SF + Sbjct: 218 IVDMCKTINIIVHDHVIISNNKYFSFKSNMLL 249 >UniRef50_B2KEG6 DNA repair protein RadC n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KEG6_ELUMP Length = 228 Score = 205 bits (522), Expect = 8e-52, Method: Composition-based stats. Identities = 60/215 (27%), Positives = 109/215 (50%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 + K K G+ + E L L L KD +A E+++ FGSL G+L + ++ Sbjct: 14 ERIKNKFAKNGLDGFMEHETLELLLTYSIPRKDTKPIAWELIKKFGSLSGVLDASPQELM 73 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 V G+G LK + + ++Y ++++ + +PE + ++ L + E+F VI+ Sbjct: 74 EVKGVGKETALFLKVVRGVYKKYAFSKLKKADIIRTPEDVANYCRASLAEHKDEVFEVIY 133 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 L ++ VI L G ++ + PR+++ A+K A ++L HNHPSG PS D Sbjct: 134 LTVRNTVIGTEVLSVGAIDRASISPRKVVEGALKAKAVGIVLVHNHPSGDPSPSMEDISF 193 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 T+ + ++ + + + V DHI++ RG Y S + I Sbjct: 194 TKEVAQAARILGIMVHDHIIVVRGGYYSMRAKSQI 228 >UniRef50_A5URD0 UPF0758 protein RoseRS_0767 n=7 Tax=Bacteria RepID=Y767_ROSS1 Length = 233 Score = 205 bits (522), Expect = 9e-52, Method: Composition-based stats. Identities = 79/221 (35%), Positives = 130/221 (58%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 ++ PRE++ G +AL D ELLA+ LR G G + + LA+++L FG GL Sbjct: 8 IRELPPTDKPRERLRSSGAAALADAELLAILLRVGIEGMNAIQLAQQLLVEFGGWNGLQR 67 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + +E+ + G+G AK AQLK E+ RR E + SP + +Q +++ ++ Sbjct: 68 AGFEELAQRRGMGEAKTAQLKAALEIGRRLLLAGGDERFLIRSPTDAAQLMQIEMSHLDQ 127 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E I LD+++RV + ++ G+L+ V EI +E I++N++++I+ HNHPSG P Sbjct: 128 EQLRAICLDTKNRVQKIQTVYIGSLHTSMVRIGEIFKEPIRLNSASIIVVHNHPSGDPTP 187 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 S D ++T +II++ + +D+ VLDH+VIG G +VS ERG Sbjct: 188 SPEDVVVTRQIIEAGRLLDIDVLDHLVIGAGRFVSMRERGL 228 >UniRef50_C2MB02 DNA repair protein RadC n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MB02_9PORP Length = 267 Score = 205 bits (522), Expect = 9e-52, Method: Composition-based stats. Identities = 74/243 (30%), Positives = 120/243 (49%), Gaps = 21/243 (8%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGS-LYGLL 59 +K S+ PREK+L+ G L+D ELLA+F+ +GT L LAK+++ + L LL Sbjct: 22 IKQWSEEDRPREKLLRLGARHLSDAELLAIFINSGTEKDSALDLAKQIMTGLDNDLGQLL 81 Query: 60 TSEYEQFSGVH---------GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREF 110 ++ +G G+G A+ + EL RR + +P+ Sbjct: 82 EIDHAYLTGCEPGEKKKRFAGLGDARACTILAAIELGRRLRDTPPPRRTPITCSLDAYRV 141 Query: 111 LQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILA 170 L+ L + E ++LD+ RVI + SG ++H R I+ AI ASA+ILA Sbjct: 142 LRRHLESLDHEELRCLYLDASGRVIKDELVSSGGVSHAVADLRLILAPAITHYASAIILA 201 Query: 171 HNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIG-----------RGEYVSFAER 219 HNHP+G +PS D +T+R+ + ++R+ DH+++G R Y+SFA+ Sbjct: 202 HNHPTGHLQPSAEDMDLTKRVKQVASVCNIRLNDHLILGRYHASVTSDGERSHYLSFADN 261 Query: 220 GWI 222 G + Sbjct: 262 GLL 264 >UniRef50_D1BNF1 DNA repair protein RadC n=3 Tax=Veillonella RepID=D1BNF1_VEIPT Length = 232 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 76/224 (33%), Positives = 123/224 (54%), Gaps = 2/224 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLL 59 +K+ PREK L G S + ELLA+ LRTG +G+ ++LA +++++F +YGL Sbjct: 8 VKDMLPFQRPREKFLALGPSHMAMEELLAILLRTGVKGQSAISLASDIVQSFDDGVYGLN 67 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLS-PEMTREFLQSQLTGE 118 + + GIG K L E+ RR ++++E S P + +++ +L E Sbjct: 68 RMTVDNLIKIKGIGRDKAVTLCAALEMGRRLGELKIKETYEDFSQPFVIAQYVMERLRHE 127 Query: 119 EREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCA 178 + E L S++++I + +G L V R + ++AI NA+A+IL HNHPSG + Sbjct: 128 DVEHVWAAMLTSRNKLIQLEHISNGGLVSSLVEQRAVFKKAIACNAAAIILIHNHPSGDS 187 Query: 179 EPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS D +T+ + + QFM + VLDHIVIG E+ S +E G + Sbjct: 188 RPSDEDIRLTKMFVSAGQFMGIPVLDHIVIGDNEFTSLSEIGKL 231 >UniRef50_Q2FT43 UPF0758 protein Mhun_2739 n=5 Tax=Archaea RepID=Y2739_METHJ Length = 225 Score = 203 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 75/223 (33%), Positives = 120/223 (53%), Gaps = 4/223 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 + + L PREK+ K G SAL D EL+A L GT+ D+LT++ ++ + L Sbjct: 6 ITDIDPLDRPREKIEKKGASALKDSELIAAILGKGTKNNDILTISSQVADL---LKKDNL 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQ-SQLTGEE 119 Y+ ++GIG K A L ELA RY +E + P+ + + + L+G+ Sbjct: 63 PSYDTLLRINGIGPTKAAVLMACFELANRYGTPAEKERIRITEPDHILKISEVTDLSGKS 122 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 +E F+V L+ VI R + G LNH VHPRE+ +AI A+A+I HNHPSG E Sbjct: 123 QEHFLVTTLNGASEVICTRTITMGLLNHSLVHPREVFADAITDRAAAIICIHNHPSGNPE 182 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS D +T ++ ++ + + + +LDH++ +G+ S G++ Sbjct: 183 PSSEDITVTRQLSEAGKILGISLLDHLIYTKGKVTSLRSLGYL 225 >UniRef50_UPI0000E0FF1E DNA repair protein RadC n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0FF1E Length = 213 Score = 203 bits (517), Expect = 4e-51, Method: Composition-based stats. Identities = 79/204 (38%), Positives = 124/204 (60%) Query: 19 ISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFA 78 IS +D +LL + L+ ++ LA+ +L GSL+G+L + F + G+G K+ Sbjct: 9 ISQWSDSQLLGVILQQRHSSENSQALAETLLTELGSLHGVLNASQNAFCDIPGVGPQKYK 68 Query: 79 QLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHR 138 + + + EL +R + L S + ++ F SQL +E F V L++QH + ++ Sbjct: 69 RCQAVVELHKRTGAQHVERMMKLDSVDESKAFFISQLQYYPQERFAVALLNNQHEFLHYK 128 Query: 139 RLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFM 198 LFSGT+N V+PREI++ A+ NA+ +ILAHNHPSG EPS+AD IT+RI ++ + Sbjct: 129 ELFSGTINAASVYPREIVKYALDYNAANVILAHNHPSGTPEPSQADIAITQRIRQALDLI 188 Query: 199 DLRVLDHIVIGRGEYVSFAERGWI 222 D++VLDHIV+G G VS A+RG + Sbjct: 189 DVQVLDHIVVGAGNAVSLAQRGCL 212 >UniRef50_UPI00016C0069 DNA repair protein RadC n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0069 Length = 225 Score = 203 bits (516), Expect = 5e-51, Method: Composition-based stats. Identities = 68/218 (31%), Positives = 119/218 (54%), Gaps = 3/218 (1%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGS---LYGLLTSEYE 64 ++P E++++ G L+D++L+ + L G + V LAK +L + L L +Y+ Sbjct: 1 MIPHERLVEDGACELSDIDLMTILLHNGIADQSVRDLAKLLLTDKHGEIQLKTLKDLKYD 60 Query: 65 QFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFM 124 + GIG K QL I E+A+R + + + L +PE + + +E+F Sbjct: 61 TLKSIKGIGKMKAIQLVAIVEIAKRLHVPKPMQLIDLKNPEDVAGLFVEEFENKFQEMFY 120 Query: 125 VIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKAD 184 ++LDS+ +I + GTLN VH R++ R AI++ A++LI+ HNHPSG EPSK D Sbjct: 121 ALYLDSKLGLIKKHCISIGTLNMTIVHARDVFRPAIEVCANSLIVVHNHPSGDPEPSKQD 180 Query: 185 KLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 IT + + + + +LDH+++G G++ S + G + Sbjct: 181 ITITRDLQFVGEVIKIPLLDHVIVGDGDFRSLRQMGIL 218 >UniRef50_D1N9M0 DNA repair protein RadC n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9M0_9BACT Length = 227 Score = 203 bits (516), Expect = 5e-51, Method: Composition-based stats. Identities = 74/212 (34%), Positives = 118/212 (55%), Gaps = 1/212 (0%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 RE+ L+ G+ L D E + L L DV LAK++LE++GSL LL + + H Sbjct: 17 RERFLRAGLEGLQDYEAIELVLTFAIPRHDVKPLAKQLLEHYGSLEKLLDATPAELLDQH 76 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+G A L +L +Y + R+ L + FL+ +L G ++E FMV+FL++ Sbjct: 77 GLGEAAVTLLALHKQLCTKYLEQKARDVDVLDNTTKIVNFLRMKLGGGKKETFMVLFLNA 136 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 Q+ ++ + GT++ V+ RE++ +AI A+A+ILAHNHP+G EPS AD +T Sbjct: 137 QNHLLCFDVI-PGTVDRATVYAREVLEKAINTKATAVILAHNHPTGICEPSPADIKLTNT 195 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 I + Q + + + DHI++ Y SFA R + Sbjct: 196 IRQVLQPVGILLHDHIIVAPSCYFSFASRRML 227 >UniRef50_C3WLA1 DNA repair protein radC n=2 Tax=Fusobacterium RepID=C3WLA1_9FUSO Length = 242 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 72/218 (33%), Positives = 112/218 (51%), Gaps = 3/218 (1%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 R++ L GI + +D E+L L +D +AK +L+ F SL + ++ ++ Sbjct: 25 ERIRKRFLDKGIHSFSDYEILEFLLFYCNAQEDTKPIAKAILKEFKSLNRVFKADIKELE 84 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMR---EESPLLSPEMTREFLQSQLTGEEREIFM 124 + GIG +K + EL Y ++ + + E +FL++++ E+ E F Sbjct: 85 KIKGIGPISAILIKFVGELLTELYGENLKIETKADKITDKEALLKFLRNKIGYEDVEKFY 144 Query: 125 VIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKAD 184 VI+L S + VI SGTL+ ++PREI + I NA ++I+AHNHPSG PSK D Sbjct: 145 VIYLSSSNEVIAFEESSSGTLDRSSIYPREIYKRVIMENAKSIIIAHNHPSGNTCPSKCD 204 Query: 185 KLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 IT I K + +L+HI+I R Y SF E G I Sbjct: 205 IDITNEIAKGLKNFGALLLEHIIITRDSYFSFLEEGLI 242 >UniRef50_Q73P26 DNA repair protein RadC n=2 Tax=Treponema RepID=Q73P26_TREDE Length = 225 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 73/222 (32%), Positives = 121/222 (54%), Gaps = 9/222 (4%) Query: 2 KNNSQLLMP--REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLL 59 KN+S P RE++L++G L+D +L+A+ LRTG + K V LA +++ + Sbjct: 5 KNSSNTDKPDMRERLLEYGPQNLSDSDLVAILLRTGIKDKPVKELADDIILHID--RARP 62 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 + G+G +K + + EL RRYY+ + R + P LQ + Sbjct: 63 EKIEGYLRSIRGMGDSKISTVLAAMELGRRYYDNKNR---TISHPTDVVPLLQ-HYADRD 118 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 RE F+ + L+ + +I R + GT+N VHPRE+ + +K A+A+I AHNHPSG E Sbjct: 119 REHFICVSLNGANEIIATRVVSVGTINRTIVHPREVYSDPLKDRAAAIIAAHNHPSGNLE 178 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIV-IGRGEYVSFAERG 220 PS D +T+RI ++ + + +++LDHI+ + G + SF + G Sbjct: 179 PSSEDMELTKRIYEAGKILGIKLLDHIILVPNGNFFSFVQSG 220 >UniRef50_B1C9I2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9I2_9FIRM Length = 224 Score = 201 bits (511), Expect = 2e-50, Method: Composition-based stats. Identities = 73/225 (32%), Positives = 125/225 (55%), Gaps = 4/225 (1%) Query: 1 MKNNSQLLM-PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGL 58 MK++ ++L E++ G+ LTD EL+AL +R G K VL L+ ++ +G SL L Sbjct: 1 MKSDKEILSGIEERLYDEGVGELTDSELVALIIRKGDSTKSVLELSNNIIRRYGASLRDL 60 Query: 59 LTSEYEQFSG-VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTG 117 + E+ G+ K + E+ RR Y ++ ++ + + L ++ Sbjct: 61 IGITREELKNDNPGMTDLKCDMILASLEIGRRAY-LKKEKQKIITCVMDIVDLLSYDMSF 119 Query: 118 EEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGC 177 + E F VI L++++ VI + GT+N VH RE+ R AIK NA+++ILAHNHPSG Sbjct: 120 LDEEHFKVILLNTKNMVIETELISIGTINTSLVHVREVFRNAIKKNANSIILAHNHPSGD 179 Query: 178 AEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + PS D+ +T+R+ + + + ++V+DH++IG+ Y SF E + Sbjct: 180 STPSIEDEHLTKRLKDAGELIGIKVIDHVIIGKDNYFSFMEENML 224 >UniRef50_B8J197 DNA repair protein RadC n=4 Tax=Desulfovibrio RepID=B8J197_DESDA Length = 229 Score = 200 bits (509), Expect = 3e-50, Method: Composition-based stats. Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 1/205 (0%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 RE+ + + + D E+L L L KD LAKE+L FG + G++ + ++ V Sbjct: 19 RERFERD-PAGMADYEVLELLLGYSLTRKDTKPLAKELLRRFGGIRGVMDARPDELLAVP 77 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G G + E RY + +R+ L +P+ QS+L G E + +D Sbjct: 78 GFGPGLMTFFTALRETYSRYTDSAVRKREVLATPQAVARMAQSRLAGCPHEECWLALVDQ 137 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++R+ RL G + V V PR++ A+ AS +I+ HNHP G PS+ADK T Sbjct: 138 RNRLTAWERLRQGGVAEVPVQPRDVFEAALLRKASGIIVVHNHPGGNPAPSEADKTFTAE 197 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVS 215 + + + LR LDH+++ G+ S Sbjct: 198 LQRLAPQLGLRFLDHVIVTEGDCYS 222 >UniRef50_B0T9F0 DNA repair protein RadC n=1 Tax=Caulobacter sp. K31 RepID=B0T9F0_CAUSK Length = 223 Score = 200 bits (509), Expect = 3e-50, Method: Composition-based stats. Identities = 72/216 (33%), Positives = 125/216 (57%), Gaps = 9/216 (4%) Query: 12 EKMLK----FGISALTDVELLALFL-RTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQF 66 E++ G S L+DVE+L L L R+G R +LA +++ FG +L ++ Q Sbjct: 12 ERLQAMAASLGPSVLSDVEILELHLARSGHRE--AGSLAHDLIARFGGFCAVLAADQSQL 69 Query: 67 SGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVI 126 +G LK + E ARR + + L S ++L++ + G RE F V+ Sbjct: 70 HL--AVGELAAMDLKLLREAARRVTRADLAQRQLLTSFSQVADYLRALMAGLPREEFWVL 127 Query: 127 FLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKL 186 FLD ++++++ RL G+++H V+PRE++R A+++N SA+ILAHNHPSG +PS+ D Sbjct: 128 FLDRRNQLLSAERLGVGSVDHAPVYPREVMRRALELNCSAMILAHNHPSGDPQPSQPDIE 187 Query: 187 ITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +T+ +I++ + + +++ DH+++ G VSF G I Sbjct: 188 MTKTLIEAGKALQIQIHDHMIVAGGAVVSFRANGLI 223 >UniRef50_A8ZUS2 DNA repair protein RadC n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUS2_DESOH Length = 253 Score = 200 bits (508), Expect = 4e-50, Method: Composition-based stats. Identities = 71/212 (33%), Positives = 111/212 (52%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 REK L G+S D E++ L L T KD AK + F +L G+L + E + Sbjct: 17 REKFLASGLSGFHDYEIIELLLTLATPRKDCKAPAKAAMAEFKTLQGVLNAAPEALCRID 76 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 GIG ++ + +A R + L + +L L RE F IF+D+ Sbjct: 77 GIGPKNLFGIRLVKAVADRCLEKELVGRPLLANSTDLLNYLNHTLRDRHRETFAAIFMDA 136 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++RVI L G+L V+PRE++ A+ +A+ALI HNHPSG EPS+ D IT + Sbjct: 137 KNRVIVVETLSEGSLTESPVYPREVVARALAHHAAALICCHNHPSGEPEPSRQDIAITRK 196 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++ +C+ M + V +HI++G + SFA+ G++ Sbjct: 197 LVMACKTMGITVHEHIIVGERGHFSFADNGYM 228 >UniRef50_Q0F0W4 DNA repair protein RadC n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0W4_9PROT Length = 261 Score = 199 bits (507), Expect = 5e-50, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 112/211 (53%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 R++ + G D E+L L L DV LAK +L FG+L G+ + + VH Sbjct: 50 RQRFSQRGFDGFHDYEVLELLLTYAIARTDVKPLAKSLLTRFGTLAGVFDAPLAELKEVH 109 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 GIG L I ++ RY + L PE R +L+ + G E F +F D Sbjct: 110 GIGEGGALFLTLIRQVEVRYLASDLPGRQLLYRPERVRAYLRLLVQGRGMECFGAMFTDQ 169 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 QHR++T + LF GT++ V+PR +++ A++++A +IL HNHP G S D +T R Sbjct: 170 QHRLLTTQILFEGTVDRTAVYPRNLMKRALELDARGMILFHNHPGGTPHASNEDIELTRR 229 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 + ++C ++L++LDH +I E +SF E GW Sbjct: 230 MAEACAPLELKILDHFLIADKEVLSFREHGW 260 >UniRef50_Q18B06 UPF0758 protein CD1144 n=8 Tax=Clostridiaceae RepID=Y1144_CLOD6 Length = 235 Score = 199 bits (507), Expect = 5e-50, Method: Composition-based stats. Identities = 67/195 (34%), Positives = 113/195 (57%), Gaps = 2/195 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLEN-FGSLYGLL 59 +K + PREKML G+ +L++ ELLA+ LRTG + K+ + LA ++ + L Sbjct: 14 VKEMAPEERPREKMLAKGVKSLSNAELLAILLRTGNKNKNAIELANYIINRDIQGIRHLE 73 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 E+ + GIG++K Q+K EL R + + + +++P + + L + Sbjct: 74 DMTIEELCNIDGIGLSKSTQIKAALELGSRVASFKPIK-YKIMNPWDIQRYYMDSLRYLK 132 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 +E+F + L++++ +I+ + GTL+ VHPRE+ +EAI+ +AS +I+ HNHPSG E Sbjct: 133 KEVFKAVLLNTKNEIISDVDVSIGTLSSSLVHPREVFKEAIRRSASKIIVMHNHPSGSVE 192 Query: 180 PSKADKLITERIIKS 194 PS+ DK IT R+IK Sbjct: 193 PSREDKNITSRLIKC 207 >UniRef50_Q6AQC9 Related to DNA repair protein RadC n=4 Tax=Deltaproteobacteria RepID=Q6AQC9_DESPS Length = 249 Score = 198 bits (505), Expect = 9e-50, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 118/215 (54%), Gaps = 1/215 (0%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 R + + G+ L+D E++ L L GT D A+ +LE + S +L + Sbjct: 19 DRLRARYFERGLDGLSDAEIIELLLSFGTPRADCKLQARALLEKYTSFARVLEASPVALQ 78 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 V G+G + I +A RY +R+ +S L S E+L ++ G ++E+F V+F Sbjct: 79 EVKGVGPKNSFAISFIHAVAARYLQLRLEGKSYLHSSTEVVEYLSYRMRGLKKEVFCVVF 138 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 LDS H +I + G+L VHPRE++ +A++ +A+ALI++HNHPSG PS D + Sbjct: 139 LDSSHGIICSEIIAEGSLTVNTVHPRELLVKALEHHAAALIISHNHPSGALLPSPQDIQL 198 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 T + C M +++LDHI+IG G Y SFA+ G + Sbjct: 199 TRLLYFLCSSMQIQLLDHIIIGDGAY-SFADHGLM 232 >UniRef50_C5SK46 DNA repair protein RadC n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SK46_9CAUL Length = 244 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 113/214 (52%), Gaps = 9/214 (4%) Query: 18 GISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHG------ 71 G S L D E+L L L +DV LAK +L FGSL +L++ E V Sbjct: 31 GTSVLPDYEVLELILFRSIPQRDVKPLAKALLSRFGSLSAVLSAPLEDMLQVSALDNKGR 90 Query: 72 ---IGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 + L+ + E RR ++ + + S + +L+ L E RE F ++FL Sbjct: 91 SLKMTPDIALDLQLMFEATRRLMAEPLKRSTVISSWQALLSYLRVTLAHEPREQFRLLFL 150 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 D ++++I + GT++H +PREI+R A++++AS++IL HNHPSG PS+ D +T Sbjct: 151 DKKNQLIADEIMNYGTVDHAPAYPREIMRRALELSASSVILVHNHPSGDPMPSQGDIDMT 210 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + I + + + + + DH+++GR +S + G I Sbjct: 211 KANIAAGKPLKIAIHDHLIVGREGVLSMKQVGAI 244 >UniRef50_Q2GL92 DNA repair protein RadC n=12 Tax=Rickettsiales RepID=Q2GL92_ANAPZ Length = 232 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 57/212 (26%), Positives = 112/212 (52%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 R+K+L + D E+L L L + D+ +AK ++E FG+L +L ++ + V Sbjct: 21 RQKILNGNGDGVFDYEVLELLLCSVRGRVDLKPVAKRLMERFGNLSQVLYADINELRKVK 80 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 +G + A L + E R + L ++L+ ++ E F+V++L+ Sbjct: 81 DMGDSSVAMLVCVREALIRVMRGNITSCVMLDKWPKLIDYLKVKIGNSTIENFLVLYLNK 140 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++ +I +GT++ ++ RE+IR+A+ A ++++HNHPSG +PSKAD +T + Sbjct: 141 RYSLIADEVQSTGTVDETPLYIREVIRKALLCGAVYIVISHNHPSGDPKPSKADINVTNK 200 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + +C MD+ ++DH+++ + SF G + Sbjct: 201 LRIACNSMDIELVDHVIVTSKRHYSFKTHGLL 232 >UniRef50_UPI0001BC61BD DNA repair protein radC n=3 Tax=Fusobacterium RepID=UPI0001BC61BD Length = 227 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 65/224 (29%), Positives = 124/224 (55%), Gaps = 2/224 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 ++N R++ L+ G S+L + E+L L L KD L+KE+L FG+L + Sbjct: 4 LRNEGHRERLRKRYLERGFSSLQEYEVLELLLTYALPRKDTKALSKELLHRFGTLSAVCK 63 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREES--PLLSPEMTREFLQSQLTGE 118 ++ E+ + GI L + +L + + ++EE + E ++++Q+ E Sbjct: 64 AKTEELQSIKGIKENTSILLHFVGDLQKELFRNSLQEEKNIHIQRKEDLISYVRAQIGFE 123 Query: 119 EREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCA 178 RE F V+FL++ ++++ LF G+++ V+PREI+ + +K A ++I AHNHPSG Sbjct: 124 NREKFFVLFLNTANQLLCSEELFQGSIDRSAVYPREILEKVLKYKAKSVIFAHNHPSGNT 183 Query: 179 EPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +PS+ D +T+ + + + D+ +++HI++ + Y SF E G + Sbjct: 184 QPSRQDIALTKEMKDALRMFDVLLIEHIIVSKHSYFSFLEEGLL 227 >UniRef50_B8FHA4 DNA repair protein RadC n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FHA4_DESAA Length = 265 Score = 196 bits (500), Expect = 3e-49, Method: Composition-based stats. Identities = 70/216 (32%), Positives = 122/216 (56%), Gaps = 4/216 (1%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 RE+ L+ G+ D E++ L L T KD AK +++FGSL +L ++ + V Sbjct: 35 RERFLQNGLDGFLDYEVVELLLTLATPRKDCKQQAKAAVDHFGSLKAVLAADKDDLQKVK 94 Query: 71 GIGVAKFAQLKGIAELARRYYNVRM---REESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 G+G A + + +A+++ + + S E L Q ++ E F +++ Sbjct: 95 GLGPANILGILLMRAVAKKHLESEAVLASLQEAVSSSEELYNLLNFQFENKKNECFFIVY 154 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 LD Q+R++ F G+LN V+ RE+I +A+K ASA++LAHNHPSG +PSK D + Sbjct: 155 LDVQNRILNMETPFEGSLNASHVYTRELIDKALKTGASAVLLAHNHPSGNTKPSKNDIQL 214 Query: 188 TERIIKSCQFMDLRVLDHIVIGR-GEYVSFAERGWI 222 T + + + +++ +L+H++IG+ GEY SFA+ G++ Sbjct: 215 TYTLFTAFRSVEIHLLEHLIIGKQGEYYSFADHGYL 250 >UniRef50_Q2IG79 DNA repair protein RadC n=8 Tax=Anaeromyxobacter RepID=Q2IG79_ANADE Length = 235 Score = 196 bits (499), Expect = 5e-49, Method: Composition-based stats. Identities = 72/212 (33%), Positives = 104/212 (49%), Gaps = 2/212 (0%) Query: 9 MPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSG 68 PRE++L G AL+D ELLAL L TGT A ++E L L + + + Sbjct: 22 RPRERLLAAGPRALSDAELLALVLGTGTGRVSARAAALSLVEALP-LAELAWAPPDALAS 80 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 GIGVA+ A L EL RR R L P E L+ ERE F V+ L Sbjct: 81 WPGIGVARAAALAAAFELGRRGAWSPPRRGERCLDPRTVHELLR-HAAHAEREGFHVVLL 139 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 D + R++ ++ G+L+ V PR+ +R A++ A ++ HNHPSG PS D +T Sbjct: 140 DVRGRLLRAVQVAEGSLSQCPVSPRDALRPAVREGAHGVVFVHNHPSGDPTPSPDDVDLT 199 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 R+ + + + DH+++ G Y SF E G Sbjct: 200 ARLRAAADLVGVLARDHVIVAAGGYYSFVEAG 231 >UniRef50_Q8UEZ6 UPF0758 protein Atu1607 n=100 Tax=Alphaproteobacteria RepID=Y1607_AGRT5 Length = 280 Score = 196 bits (498), Expect = 6e-49, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 116/210 (55%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 R + G +AL D ELL L L +D +AK ++ FG+L +L + Sbjct: 66 DRLRTRYRDGGDAALADYELLELLLFRLIPRRDTKPIAKALIARFGTLGSVLGAPLPLLQ 125 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 V G+G A LK +A +++R +R + L S ++ + + E RE F ++F Sbjct: 126 EVKGVGEAVALDLKLVASVSQRMLKSEIRNKQVLGSWSSVIDYCHAAMAHETREQFRILF 185 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 LD ++ +I GT++H V+PREI+R A++++++ALIL HNHPSG PS+AD + Sbjct: 186 LDKRNVLIADEVQGQGTVDHTPVYPREIVRRALELSSTALILIHNHPSGDPTPSRADIEM 245 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFA 217 T+ II + + + + V DHI+IG+ + SF Sbjct: 246 TKTIIDTAKPLGITVHDHIIIGKDGHASFK 275 >UniRef50_Q8RF15 UPF0758 protein FN0909 n=11 Tax=Fusobacterium RepID=Y909_FUSNN Length = 232 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 73/227 (32%), Positives = 115/227 (50%), Gaps = 7/227 (3%) Query: 3 NNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSE 62 N REK GI + E+L L L KD +AKE+L F SL + + Sbjct: 6 NQGHRERIREKFFNNGIDGFAEYEILELLLTYCIPRKDTKPIAKELLNKFKSLDNVFKAS 65 Query: 63 YEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREES-------PLLSPEMTREFLQSQL 115 +++ S + G+G LK + EL Y ++ + + + ++ ++L++++ Sbjct: 66 FDKLSTIDGLGKNSITFLKLLGELPSIIYKDELKNKKLIDKETLKISNKDILLKYLRNKI 125 Query: 116 TGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPS 175 EE E F VI+L S + VI GTL+ V+PREI ++ I +NA ++ILAHNHPS Sbjct: 126 GYEEIEKFYVIYLSSSNEVIEFEENSVGTLDRSSVYPREIYKKVINLNAKSIILAHNHPS 185 Query: 176 GCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PSK+D +T I K + +++HI+I + Y SF E G I Sbjct: 186 DNITPSKSDIELTNEIAKGLKNFGALLIEHIIITKNSYFSFLEEGLI 232 >UniRef50_C1A4H3 DNA repair protein RadC n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A4H3_GEMAT Length = 244 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 82/223 (36%), Positives = 116/223 (52%), Gaps = 1/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLL 59 +K PRE++ G AL+ EL+A L +G +G + A+ + E G SL L Sbjct: 22 IKELPASERPRERLRALGSQALSTTELIATLLGSGQQGTSAVACAQVVFEQCGGSLGRLA 81 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 + + G+GVA+ A + EL RR PL P +L Sbjct: 82 AMPLAALTRIRGVGVARAAAVHAALELGRRMAGEAREAGLPLRGPRDVAAAFAPRLQDAP 141 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 E F V LD+QHR+ + G LN VHPRE+ REAI A+A+IL HNHPSG Sbjct: 142 VEEFHVAILDAQHRLERDVLITRGLLNSSLVHPREVFREAIAERAAAVILVHNHPSGDPT 201 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS D+ +TE+++ + + +D+ V DHI++GRG YVSFAE G + Sbjct: 202 PSAEDRAVTEQLVAAGRLLDIPVHDHIIVGRGRYVSFAEAGLL 244 >UniRef50_D0LGP2 DNA repair protein RadC n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LGP2_HALO1 Length = 226 Score = 193 bits (490), Expect = 5e-48, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 116/208 (55%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 +PRE+ L +G +++ ELLAL L TGTRG++VL LA+ +L G L L + + Sbjct: 11 DLPRERFLAYGGERVSNAELLALILGTGTRGRNVLELAEHLLHALGGLPQLARAAPSELL 70 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 V GIG A+ +++ L RR + +P E L+ +L G +E+F+VI Sbjct: 71 EVPGIGAARASRVAATFHLGRRALEASAAAPVVVRNPRDLYERLRLRLRGLSQEVFLVIA 130 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 LD ++ +I + G L V+VHPRE+ R I+ A+A ++AHNHPSG PS D + Sbjct: 131 LDPRNVIIEEIEVARGCLTGVDVHPREVFRPLIRRGAAAAVVAHNHPSGDPAPSAEDIAL 190 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVS 215 T R+ ++ + + +LDH+V+G S Sbjct: 191 TRRLCEAGDLLGIPLLDHLVLGACNCAS 218 >UniRef50_B1H050 DNA repair protein RadC n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H050_UNCTG Length = 229 Score = 192 bits (489), Expect = 7e-48, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 118/212 (55%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 R+K + G S L D E+L L L KDV LAKEM+ FGSL + ++ +Q G+ Sbjct: 18 RKKFIPGGFSNLADYEILELTLTYVLPRKDVKALAKEMINKFGSLKQVFDADTDQLKGIK 77 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 GI L + + Y ++ ++E+ L SP+ +++L S L+GE E F I L+S Sbjct: 78 GISDYSAEFLLFLKKFISLYLSLDIKEKDRLSSPKNVKDYLISTLSGENIEKFYAILLNS 137 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 +RV + SGT+N + PR+I A+K A+++++AHNHP G +PS+ D T Sbjct: 138 GNRVTDCLEIESGTVNKSLLIPRKIAEIALKCRAASVVIAHNHPGGTLKPSQNDINATVA 197 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + K+ + +++ +LDHI+I Y SF E I Sbjct: 198 VKKALESIEISLLDHIIISNNNYFSFKEYSLI 229 >UniRef50_C0R2T1 DNA repair protein RadC n=7 Tax=Wolbachia RepID=C0R2T1_WOLWR Length = 224 Score = 192 bits (489), Expect = 7e-48, Method: Composition-based stats. Identities = 58/212 (27%), Positives = 116/212 (54%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 REK++ +L D E+L L + DV +AK ++ENFGSL + ++ E V Sbjct: 13 REKIILDNGQSLLDYEVLEHILYSAYSRIDVKPIAKSLIENFGSLNKVFNADLEALQNVD 72 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+ A + + + + R +++ + + E ++L+ + +E F VI+++ Sbjct: 73 GVSNAAISAIFCVKQAFVRSAREEIKDLPIIDNWEKLLDYLRISIGSLNKENFRVIYMNK 132 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++R+I GT++ ++ REII+ A+ I +++++++HNHPS +PS +D +T + Sbjct: 133 KYRLIAEDLQNIGTVDQTPLYVREIIKRALLIGSTSIVISHNHPSRDTQPSNSDISLTRQ 192 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + ++CQ + + ++DHI+I Y SF E + Sbjct: 193 LAEACQSIGIELIDHIIITFSSYFSFKENRLL 224 >UniRef50_A0L491 DNA repair protein RadC n=4 Tax=Bacteria RepID=A0L491_MAGSM Length = 241 Score = 192 bits (489), Expect = 7e-48, Method: Composition-based stats. Identities = 63/216 (29%), Positives = 116/216 (53%), Gaps = 1/216 (0%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 R + + G+ D ++L L L +D +A +++ FGSL ++ ++ + Sbjct: 20 DRLRNRFAQEGLDGFEDHQILELALFYALPRRDTNPIAHRLMQRFGSLSAVMEADPVDLA 79 Query: 68 GVHGIGVAKFAQLKGIAELARRY-YNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVI 126 V G+G + + L RRY ++ R ++PL + R++L + G E+F V+ Sbjct: 80 TVEGMGETAALFITMLPALTRRYQHDAATRNKTPLNRADNVRDYLVPLMAGRTEEVFYVL 139 Query: 127 FLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKL 186 LD+Q R++ + GT+ VHPR+++ I+ A+ +ILAHNHPSG + S+ D L Sbjct: 140 CLDAQCRLLFPALVTEGTIRQAHVHPRQVVELVIRHKAAHVILAHNHPSGNPKASQDDIL 199 Query: 187 ITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +T ++++ +D++VLDH++I + SFA G + Sbjct: 200 LTSHLMQALNPIDVQVLDHLIIAGEKVFSFASAGMM 235 >UniRef50_Q1MS20 DNA repair proteins n=3 Tax=Desulfovibrionaceae RepID=Q1MS20_LAWIP Length = 226 Score = 191 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 109/212 (51%), Gaps = 1/212 (0%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 R+++ S + + ELL LFL KD LAK++L+ FGS+ G L + + + Sbjct: 16 RKRLCND-PSEMAEYELLELFLGYVHLRKDTKPLAKKLLQQFGSIRGALDAFPGELETIP 74 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G A A K I E+ RY +RE+ L +P++ E +++ TG E + +D+ Sbjct: 75 QFGEALSAFWKLIREIFARYAETPVREKIQLCTPKIVAEIAKARFTGCPHEEVWIATVDT 134 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 Q+R+I+ RL GT+ ++PR+ I +K AS IL HNHP G + S D IT Sbjct: 135 QNRLISWERLSKGTIGSSPLYPRDTIEIVLKRKASGFILVHNHPGGSSNASSFDIEITRH 194 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + Q ++LR++DHI++ S G + Sbjct: 195 LEHIAQSINLRLIDHIIVTEKNCYSIRNDGLL 226 >UniRef50_Q1DAY3 DNA repair protein RadC n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DAY3_MYXXD Length = 241 Score = 191 bits (486), Expect = 1e-47, Method: Composition-based stats. Identities = 72/212 (33%), Positives = 112/212 (52%), Gaps = 1/212 (0%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 RE++ + G +ALTD ELL + +G R +A +L G L GL+ E S Sbjct: 13 RERLFRLGAAALTDPELLCVVWSSGPRAPGAWAVAGALLSEGGGLKGLVQQEPLALSLRP 72 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+G + AQ EL R L +P+ +L L RE+F V+ ++ Sbjct: 73 GVGPVRAAQALAALELGR-RSQRARERRPRLRTPKEIAAYLAPVLGALRREVFHVLCFNA 131 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++ ++ R+ GT+N V PRE+ A+ A++++LAHNHPSG EPS D +T Sbjct: 132 RNVLVHDARVAEGTMNTCPVDPREVFAAALTSRATSIVLAHNHPSGDPEPSVQDLGLTRH 191 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++ Q ++++VLDH+V+G G YVS ERG + Sbjct: 192 LVAGAQLLNIKVLDHVVMGDGGYVSMLERGLM 223 >UniRef50_C9RLS9 DNA repair protein RadC n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLS9_FIBSS Length = 233 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 71/209 (33%), Positives = 110/209 (52%), Gaps = 5/209 (2%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 LMPREK+ G+S+L++ ELLAL L +G+ V LA+ + E + + + Sbjct: 16 LMPREKLEFSGVSSLSNEELLALILGSGSHECSVFELARRLSEFLSTETSVP--TLARLK 73 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 + G+G K AQ+ EL+ R+ + P+ PE + + + E +E +VI Sbjct: 74 SIRGLGKVKAAQILACLELSGRFILSD--KAIPVAVPEDVLSRV-AYMKYESQEHLVVIS 130 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 L+S + +I L +G +N VHPRE AI+ A ++I HNHPSG EPS D I Sbjct: 131 LNSANYIIRVHELTTGLVNQTPVHPREAFALAIEDRAVSVIFVHNHPSGSLEPSPEDMSI 190 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSF 216 T + S + + + VLDHI+IG+ + S Sbjct: 191 TRVLCASGKILQIPVLDHIIIGKSGFTSL 219 >UniRef50_A7GTD5 DNA repair protein RadC n=3 Tax=Bacillaceae RepID=A7GTD5_BACCN Length = 185 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 62/177 (35%), Positives = 112/177 (63%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +++ + PRE+++ G S+L++ ELLA+ LRTG++ + VLTLA ++L +F L L Sbjct: 4 IRDVLKEEQPRERLISEGASSLSNRELLAILLRTGSKEESVLTLADKILRHFDGLRMLRD 63 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + E+ + +HG+GVAK +QL EL RR + + + SPE ++ ++ ++ Sbjct: 64 ATMEEITSIHGVGVAKASQLIAAFELGRRMVRLEYQHRYSIRSPEDCASYMMEEMRFLQQ 123 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGC 177 E F+ ++L+++++V+ + +F G+LN VHPRE+ +EA + A+++I HNHPSG Sbjct: 124 ENFVCLYLNTKNQVMHRQTVFIGSLNASIVHPREVFKEAFRRAAASIICLHNHPSGV 180 >UniRef50_A2SPN1 DNA repair protein RadC n=1 Tax=Methanocorpusculum labreanum Z RepID=A2SPN1_METLZ Length = 247 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 67/220 (30%), Positives = 113/220 (51%), Gaps = 5/220 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +KN + + PREK++ G +L EL+A + G G D + + K++ + S Sbjct: 31 LKNTADIDKPREKLIAKGPGSLELEELVAAIIGRGVPGCDAVQIGKKVAKILMS--RTYE 88 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 +E GV+G+G AK Q+ ELARR+ + + + E F+ Q + + Sbjct: 89 TEVNDLCGVNGMGEAKACQIIAALELARRFP-PPVHRFAVIHKAEDVLPFVH-QYRYDTQ 146 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E + + L H V+ R + G +N ++HPRE+ AI A+A+IL HNHPSG P Sbjct: 147 ENVISVTLSGAHEVLKVRLITKGLVNESQIHPREVFAGAILDRAAAMILIHNHPSGNLHP 206 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIG-RGEYVSFAER 219 SK D IT+ + + + + +++LDH++IG + S + Sbjct: 207 SKQDLKITKEMQAAGELLGIKLLDHLIIGPTDGFYSIVDE 246 >UniRef50_A8ZTW3 DNA repair protein RadC n=5 Tax=Bacteria RepID=A8ZTW3_DESOH Length = 223 Score = 189 bits (482), Expect = 4e-47, Method: Composition-based stats. Identities = 70/219 (31%), Positives = 115/219 (52%), Gaps = 6/219 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K+ PREK+LK G + L+D ELLA+ L GT DV L++++++ LT Sbjct: 8 LKDLPPADRPREKLLKQGAAFLSDQELLAILLSKGTAKDDVFALSRKIIKIIDEKGAALT 67 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + V GIG+AK A + E RR R++ + + L ++ Sbjct: 68 A--QDIMAVDGIGMAKAAAICAAFEFVRR----RVKPQGLKIKFPADVLPLIHHYADRKQ 121 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+ + ++ + V++ R + G +N +VHPRE+ + + ASA+I+AHNHP G P Sbjct: 122 EHFLCVSINGANEVMSVRVVSIGLINKTQVHPREVFADVLAERASAVIVAHNHPHGDLAP 181 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAER 219 S+ D +T ++ + Q + L LDHI+ Y SFAE+ Sbjct: 182 SREDIQVTRQLKDAAQTLGLTFLDHIIFNTTGYYSFAEQ 220 >UniRef50_C4GB45 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GB45_9FIRM Length = 241 Score = 189 bits (481), Expect = 5e-47, Method: Composition-based stats. Identities = 69/221 (31%), Positives = 117/221 (52%), Gaps = 1/221 (0%) Query: 3 NNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLE-NFGSLYGLLTS 61 N P K+ + G +ALTD EL+A+ LR+GTR DVL +A+E+L SL L+ Sbjct: 21 NRYADNAPDRKLDRCGCAALTDAELIAILLRSGTRDCDVLAMAEELLRLRQHSLADLVNI 80 Query: 62 EYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEERE 121 ++ + GIG K +L+ + EL+RR + R + L + + +L E+ E Sbjct: 81 SRDELMLIPGIGPVKARELQSVFELSRRIASNTRRRKLKLTETKSIAGYYMERLRHEDSE 140 Query: 122 IFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPS 181 + + + + + ++ + G+ + + R+I A+ AS L+L HNHPSG PS Sbjct: 141 LLVAAYFNVRDELVFESVISLGSSDRTDFPIRKIFSLALTHQASQLVLLHNHPSGDPTPS 200 Query: 182 KADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +AD L T+ + Q++++ + DHI+IG +Y SF + I Sbjct: 201 QADYLATQEAKMAGQYLEIALRDHIIIGDHQYYSFRQGELI 241 >UniRef50_UPI00016B261F DNA repair protein RadC n=2 Tax=candidate division TM7 RepID=UPI00016B261F Length = 214 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 124/215 (57%), Gaps = 5/215 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 + + L PREK+ ++G + L+D+ELL + +G + DV +A+E+L+ G Sbjct: 3 ISDRHPLERPREKLARYGTARLSDLELLMAIIGSGNKQADVGKIAREVLKIVRQKGG--D 60 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 Y+ V G+G AK + ELARRY ++ + SPE E L S + +++ Sbjct: 61 ISYDDLRYVVGLGEAKIPVIVASLELARRYLLD--SDQPIIDSPEKAVELL-SDIRDKKQ 117 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+ + LD +R+I R + GTL VHPRE+ +AI A+++I+AHNHPSG E Sbjct: 118 EYFVCLTLDGANRLIAKRVVTIGTLTASLVHPREVFADAIADRAASIIVAHNHPSGSLEA 177 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVS 215 S+ADK +T R+ ++ + + + + DHI+I + ++VS Sbjct: 178 SQADKDVTSRLAEAGRLLGITLNDHIIITKTDFVS 212 >UniRef50_Q7UL21 DNA repair protein n=4 Tax=Bacteria RepID=Q7UL21_RHOBA Length = 319 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 9/210 (4%) Query: 18 GISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGS-LYGLLTSEYEQFSGV-HGIGVA 75 G ++L++ +LLA+ +R G G+ T ++ +F L + + + + A Sbjct: 109 GAASLSNADLLAILIRVGVVGESATTGGTKLANHFDEVLDAIREQSVSELRHITKAVTKA 168 Query: 76 KFAQLKGIAELARRY---YNVRMREESPLLSPEMTREFLQSQLT----GEEREIFMVIFL 128 + Q+ EL RR R + S E+ + +E F ++ L Sbjct: 169 SYCQIMAGIELGRRATEAARERPVPIVKITSTTEATEYCAQKFAYLAGDAVQEEFHIVTL 228 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 D++H+ I R+ GTL+ VHPRE+ R AI+ A+A++L HNHPSG PS+ D +T Sbjct: 229 DTKHKPIRTHRITVGTLDSSLVHPREVFRPAIRDAAAAVLLVHNHPSGDPTPSREDHAVT 288 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAE 218 ER+ ++ + + + VLDHIV+ + +S E Sbjct: 289 ERLTEAGKLIGITVLDHIVVAKQRCLSLRE 318 >UniRef50_B9QT39 DNA repair protein RadC n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QT39_9RHOB Length = 228 Score = 187 bits (475), Expect = 2e-46, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 109/212 (51%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 R + + G ALTD+E++ L L R + T+A+ +L F SL LL + + Sbjct: 17 RFRCREVGPDALTDLEIITLLLVPLYRWEHAETIAQRLLSEFQSLPELLNAPRHRLLEFS 76 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+G L I + R + E L +++Q+ + E E F +FL+ Sbjct: 77 GVGPVLADTLSAIRQCIVRSARAEITERRVLDCWSEVIDYIQATMGYLEIEQFRCLFLNK 136 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 +H VI + GT++H V+PRE++R A+ + ASALIL HNHPSG PS+ D +T + Sbjct: 137 KHGVIADEVMQEGTVDHTPVYPRELMRRALILQASALILVHNHPSGDPTPSRPDIEMTAQ 196 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++ + + + + DHI++ RG VSF + Sbjct: 197 LVDIAKPLGIEINDHIIVARGLAVSFKGMNLL 228 >UniRef50_A9GNT0 DNA repair protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GNT0_SORC5 Length = 259 Score = 186 bits (473), Expect = 4e-46, Method: Composition-based stats. Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 1/214 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PRE+ L+ GI +L D +LLA+ L TG G V ++ +L F L GL + Sbjct: 31 PRERALEEGIWSLGDADLLAIVLGTGLVGTPVTLVSAALLSRFAGLEGLARLGPHALAEH 90 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+G+AK ++ EL RR + +R P+ + + +QL + E VI LD Sbjct: 91 PGLGLAKALRIAASLELGRRAFERSVRPRPPVRTSASIAAWCAAQLGPLDHEQMWVISLD 150 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 ++ + RR+ G L+ V R+I+R A+ ASAL+L HNHPSG + PS D +T Sbjct: 151 GRNGMRGARRVAQGGLHGCSVTARDILRAALSDAASALVLVHNHPSGDSAPSPEDVAMTN 210 Query: 190 RIIKSCQFMDLRVLDHIVIG-RGEYVSFAERGWI 222 + + + + + ++DH+++ G Y S + G I Sbjct: 211 AVAAAGEVIGVPLVDHVILAPDGHYSSLLDLGMI 244 >UniRef50_A7VWV8 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VWV8_9CLOT Length = 251 Score = 186 bits (472), Expect = 7e-46, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 110/211 (52%), Gaps = 2/211 (0%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 REK ++ G+S+L E++ L L KD+ LA E+LE FGS LL + E+ Sbjct: 12 DRLREKFIRHGLSSLEPHEVVELMLYAAVPRKDMNPLAHELLEGFGSFPALLDAPIEELM 71 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 GIG +K + + R Y + + S E + + S+ TG E ++ Sbjct: 72 KYKGIGRGSAITIKLFSAIGRFYIESKADKGP--TSMEEVIDIILSKFTGRSNEAVVLTL 129 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 LD + +V+ + GT N +V+ R I+ A +A+ ILAHNHPSG A PS+ D Sbjct: 130 LDGKGKVLYCGVVTEGTANSCDVYLRRIVGLAASYDATQAILAHNHPSGFALPSRTDLQT 189 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAE 218 T R+ ++ +++ ++DH+++ G+YVS A+ Sbjct: 190 TVRVKEALALVNVTLIDHMIVADGDYVSMAQ 220 >UniRef50_B6AT60 DNA repair protein RadC n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AT60_9RHOB Length = 253 Score = 185 bits (471), Expect = 7e-46, Method: Composition-based stats. Identities = 64/212 (30%), Positives = 115/212 (54%), Gaps = 2/212 (0%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 RE+ G L+D E+L L L + KD +A+++L FG + L ++ + + Sbjct: 44 RERFQDHGAEHLSDAEMLELLLLHASPRKDTRPIAQKILAEFGDIASTLAADTARLEAL- 102 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 IGV+ LK + ++R R+ + S + + ++ L +E E F V+FL+ Sbjct: 103 -IGVSATQDLKLVFGASKRMAKARIAHRPLISSWDAVLTYCRTSLAHKETEEFHVLFLNR 161 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++ +I L GT++HV V+PRE+++ A+++N+ A+IL HNHPSG PS +D +T+ Sbjct: 162 RNMLIADETLGVGTVDHVPVYPREVLKRALELNSCAIILVHNHPSGDPSPSSSDIEMTKL 221 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 I ++ + + + DH++IG SF G + Sbjct: 222 IKQAADSLSITLHDHLIIGATGETSFVSEGLL 253 >UniRef50_C6XNR3 DNA repair protein RadC n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNR3_HIRBI Length = 272 Score = 185 bits (471), Expect = 7e-46, Method: Composition-based stats. Identities = 64/215 (29%), Positives = 116/215 (53%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 R+++L+ + L D ELL L L +DV +AK +++ FG + G++ + ++ Sbjct: 58 DRLRDRVLQGHGNTLPDYELLELLLFAFIPRRDVKPVAKALIDKFGGISGVMAAPIKRLK 117 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 V GIG ++ L +R ++ + + ++ L E E F V+F Sbjct: 118 EVDGIGETCATYIQATHLLNQRCSLEEVKARPIISNWGALLSHVRIALQHETEEQFRVLF 177 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 LD ++++I R GT+NH V+PRE+ + A++++ASALIL HNHPSG PS+AD + Sbjct: 178 LDHKNQLIADERQSQGTINHAPVYPRELAKRALELSASALILVHNHPSGDPTPSRADIDV 237 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 T I+ + + +++ + DH+++G+ S + I Sbjct: 238 TREIMDAFEPLEITIHDHLIVGKKGITSLKAKNLI 272 >UniRef50_Q1WT78 DNA repair protein n=3 Tax=Lactobacillus RepID=Q1WT78_LACS1 Length = 225 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 60/222 (27%), Positives = 114/222 (51%), Gaps = 1/222 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 + NN +K+++FG LT+ ELL L T + K+ + L L Sbjct: 3 LTNNYSEKYITDKIIRFGAETLTNKELLQFILTTKVSQTSAKNVIKDFFDEHQRLNELQF 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 E + K A ++ + E + RY + S M ++ ++ ++ Sbjct: 63 FSDEGLKNLCKDDE-KVAIIRALREFSERYKEKEGLVLGQIFSSCMFGNYMIDKIGDSKQ 121 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E+ + + LD++++V++ + +F GTLN VHPREI + A+ + + +++AHNHPSG EP Sbjct: 122 ELLVCVCLDTKNQVLSEKVIFKGTLNSATVHPREIFKHALNFSCARILVAHNHPSGNVEP 181 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S+ D +T+R+I + + + + ++DH+++G Y+S AE + Sbjct: 182 SENDIQLTKRLINAGKMIGIELIDHVIVGSEVYLSLAEEKIV 223 >UniRef50_D2EK65 DNA repair protein n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EK65_PEDAC Length = 225 Score = 183 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 63/209 (30%), Positives = 105/209 (50%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 REK+ K G LT+ ELL FL + + V L++E + G + G + + Sbjct: 11 REKLTKIGAENLTNAELLRAFLSCCGQEQAVNRLSQEFWDQVGDIVGYSLLTQRERQTIF 70 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 A+ L+ EL RR + +L + ++ +E +++ LD+ Sbjct: 71 SQLPAESLALEAAIELGRRVQRQPIHLLGKVLGSAQIGNLMVARFQKNPQEHLVLLCLDT 130 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++++ R +F G LN EVHPREI+ E ++ +++ IL HNHPSG EPS D T++ Sbjct: 131 KNQIKQERVIFKGGLNSAEVHPREIMAEVLRYSSNGFILVHNHPSGNVEPSMNDVAFTKK 190 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAER 219 + K M +R++DH+++G Y S AE Sbjct: 191 MKKIGDLMGIRLIDHLIVGDQTYWSAAEN 219 >UniRef50_B0PEI5 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PEI5_9FIRM Length = 230 Score = 183 bits (465), Expect = 4e-45, Method: Composition-based stats. Identities = 60/212 (28%), Positives = 108/212 (50%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 +E+ L+ G+ +L L L +D LA ++ FGSL + + +++ V Sbjct: 13 KERFLREGLDHFEPHTVLELLLFYAVPQRDTNELAHRLIARFGSLDAVFDAAFDELCAVE 72 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 GIG LK + +L RRY + E+ L S + +FL+ + G +E+ ++ L++ Sbjct: 73 GIGRNTATLLKLVPDLTRRYLDSADHEQVLLTSVQAIGDFLRPKFLGRTKEMVFLLCLNN 132 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 + + + GT++ ++ R I+ A++ A ++ILAHNHP G A PS AD TE Sbjct: 133 KGGLTYGDFIAEGTIDSAPMYSRTILEAAMRSRAVSVILAHNHPHGLAVPSNADLAATES 192 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + + +R+LDH + +Y+S + G+I Sbjct: 193 VCHALAAAKIRLLDHFIFAGQDYISLRDSGFI 224 >UniRef50_B0T9R6 DNA repair protein RadC n=4 Tax=Alphaproteobacteria RepID=B0T9R6_CAUSK Length = 253 Score = 182 bits (463), Expect = 6e-45, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 117/211 (55%), Gaps = 5/211 (2%) Query: 13 KMLKFGISALTDVELLALFL-RTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHG 71 + G+++L+D+E L L L R+ G +A +L FG L +LT++ S Sbjct: 47 RAATGGLASLSDIEALELLLSRSLANGARATAVA--LLARFGCLRRVLTADLAALSTF-- 102 Query: 72 IGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQ 131 + L+ I + ARR + + S ++L+ + ERE F V+FLD + Sbjct: 103 VDTRVGIDLQLIYDAARRLAAAELPGRCVVSSWTALIDYLKLTMAHCEREAFRVLFLDKK 162 Query: 132 HRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERI 191 +++I L GT++H V+PRE++R A++++ASA+IL HNHPSG PS AD +T+++ Sbjct: 163 NQLIADEILNHGTVDHAPVYPREVVRRALEVSASAVILVHNHPSGDQTPSSADIEMTKKV 222 Query: 192 IKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + + + + + V DH+++GR E SF G I Sbjct: 223 VDAARTLGIAVHDHVIVGRAEVASFKALGLI 253 >UniRef50_A0LNF4 DNA repair protein RadC n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LNF4_SYNFM Length = 225 Score = 182 bits (462), Expect = 8e-45, Method: Composition-based stats. Identities = 75/210 (35%), Positives = 108/210 (51%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 RE+ + G+S D E+L L L +DV LAK++L FGSL +L + V Sbjct: 13 RERFGRSGLSGFHDHEVLELLLSYAIPRRDVKPLAKDLLSRFGSLAAVLDAPPAVLRNVP 72 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 GIG A L + EL RY R E S +L + L E E F ++ L+S Sbjct: 73 GIGPNAAALLSILPELFTRYRESRWHREETFNSTRGAVSYLSALLCTERSEKFCILALNS 132 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 + +I + G++N V PR ++ ++K A+A+ILAHNHP G PS AD+ +T R Sbjct: 133 TNDLIQMEEIQRGSVNRTAVFPRLVVEASLKHRATAVILAHNHPGGDPNPSAADQQLTRR 192 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 + + +D+ V DHI+I Y SFAE G Sbjct: 193 LKRILNDLDIIVHDHIIIAGPRYYSFAEHG 222 >UniRef50_D1PFM8 DNA repair protein RadC n=1 Tax=Prevotella copri DSM 18205 RepID=D1PFM8_9BACT Length = 218 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 68/214 (31%), Positives = 109/214 (50%), Gaps = 3/214 (1%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLLTSEYEQFSG 68 P+ K G+ LT VEL++L + TGT+ + A+++ SL + + E Sbjct: 5 PQYKAYNNGLGNLTTVELISLVIGTGTQKN--VEQARQIFNVMEESLRNIAKARVEDLQV 62 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 V GIG +K L+ EL +RY M E L S FL + E E ++ + Sbjct: 63 VQGIGDSKAIALQAAIELGKRYSLENMAERPDLGSSLAIYNFLYPHVKDLEVEECHLLLM 122 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 + R+I H + G + V R I+REA+ NA+ L +AHNHPS PSKAD ++T Sbjct: 123 NQNFRLIKHVPMSHGGITETAVDVRRIMREAVLNNATILAIAHNHPSNSPHPSKADDMLT 182 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + + ++C M + +DH++I G Y S+ ++G + Sbjct: 183 KSVKEACSIMRIFFMDHVIIADGCYFSYHDKGRL 216 >UniRef50_A5VEU8 DNA repair protein RadC n=4 Tax=Sphingomonadales RepID=A5VEU8_SPHWW Length = 230 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 106/207 (51%), Gaps = 1/207 (0%) Query: 16 KFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVA 75 + G AL D EL+ L +D +A+ +L FG L LL+++ E + G+ Sbjct: 25 EGGPDALLDHELIEYLLALAIPRRDTKPMARALLAEFGGLGPLLSADPESLARA-GLSEG 83 Query: 76 KFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVI 135 A LK A R ++++ L + ++L++ + E V+ L+S++ ++ Sbjct: 84 VVAALKIAEASALRLLRSKVQDRPILSDWQALADYLRADMAHRAVERVRVLHLNSKNVLV 143 Query: 136 THRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSC 195 + G+++ V+ REIIR A+++ ++ALI+ HNHPSG +PS+ D +T +I + Sbjct: 144 RDELVSEGSVDQAAVYVREIIRRALELGSAALIIVHNHPSGDPQPSRQDVELTRELIAAA 203 Query: 196 QFMDLRVLDHIVIGRGEYVSFAERGWI 222 + + + + DH+V+G S G I Sbjct: 204 KPLGIAIHDHVVVGTRGQASLRALGLI 230 >UniRef50_C9BR87 DNA repair protein RadC n=4 Tax=Enterococcus faecium RepID=C9BR87_ENTFC Length = 223 Score = 180 bits (457), Expect = 3e-44, Method: Composition-based stats. Identities = 61/176 (34%), Positives = 99/176 (56%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K +PRE+M +G AL+D ELLA+ LRTG V+++A +L+ FG L L Sbjct: 6 IKEVPTSSLPRERMEIYGAEALSDQELLAILLRTGQHPYSVMSIAGNLLKTFGGLASLRQ 65 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + + GIG K ++K + EL RR R P+ + + L ++ ++ Sbjct: 66 ATLHELEEIRGIGRVKAIEIKALIELGRRIQTDHERAAPPVRTSYELAQQLILEMKDHKQ 125 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSG 176 E + I+LD++++VI + +F G+LN HPREI A++ A+ ++LAHNHPSG Sbjct: 126 EHLVCIYLDTKNQVILKKTVFIGSLNQSVAHPREIFHYAVRYCAARIVLAHNHPSG 181 >UniRef50_A6NZB7 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZB7_9BACE Length = 233 Score = 179 bits (456), Expect = 4e-44, Method: Composition-based stats. Identities = 61/215 (28%), Positives = 106/215 (49%), Gaps = 1/215 (0%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 R++ + + D ++L L L +D LA ++L+ FGSL G+L + E S Sbjct: 16 DRLRKEFMAR-PESFPDHKVLELLLFYVLPRQDTNPLAHDLLDRFGSLQGVLDAPPEALS 74 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 V G+G + + EL RRY R E + S RE + G E+ ++ Sbjct: 75 QVKGVGERAAVLFRAVKELGRRYGVSRASLEDIVDSTRAAREVFEPLFYGARNEMVYLLC 134 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 +D + + + ++ G +N E++ R I+ A+ NAS +ILAHNH SG A PS DK Sbjct: 135 MDGKGKYLGCPKVGEGNVNAAEINARVIVEAALNHNASRVILAHNHVSGLALPSDEDKQT 194 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 T + + + + + ++DH++ + VS + G++ Sbjct: 195 TLYLRELLRQVGVILVDHLIFVDDDMVSMGDSGFL 229 >UniRef50_A6GHT1 DNA repair protein RadC n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHT1_9DELT Length = 260 Score = 179 bits (455), Expect = 6e-44, Method: Composition-based stats. Identities = 82/221 (37%), Positives = 117/221 (52%), Gaps = 5/221 (2%) Query: 2 KNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTS 61 K +Q PRE++L FG +L++ E L G + A+ +L+ G L GL + Sbjct: 29 KRKAQE-RPRERLLLFGPKSLSETE----LLALLLGGGRAVQRAQAVLDAVGGLNGLSRA 83 Query: 62 EYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEERE 121 + V GIG A L EL RR + + PL P FL+S L ERE Sbjct: 84 CAHELREVIGIGDAGATALAAAVELHRRLDRLDLPMRRPLRHPREAERFLRSLLGDAERE 143 Query: 122 IFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPS 181 FM+I LD++ RV+ R + G+L VEVHPRE+ R ++ A +L HNHPSG A PS Sbjct: 144 HFMIIGLDARQRVLLVRTIAVGSLTRVEVHPREVFRPLVRAGAHTCLLVHNHPSGDARPS 203 Query: 182 KADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +AD +T R+ +F+ + VLDH+V+ +VS AE G + Sbjct: 204 EADIELTARMTDIGRFLGIPVLDHVVVSANGFVSLAELGLV 244 >UniRef50_C1SJ65 DNA repair protein radc n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJ65_9BACT Length = 221 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 69/205 (33%), Positives = 109/205 (53%), Gaps = 4/205 (1%) Query: 19 ISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFA 78 +L D E+L L L RG+DV AKE+LE GSL +L + + G+G Sbjct: 20 PESLYDYEVLELLLGYVLRGRDVKPQAKELLERAGSLSAILGYDT---KNIKGLGEEAQM 76 Query: 79 QLKGIAELARRYYNVRM-REESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITH 137 I E R + RE + PE +FL+ ++ +++E F+ +FLD +++ Sbjct: 77 FFGAIREFFARLGYEDIDREAVIIDKPEKAAQFLKYKIAYDKKEHFVALFLDVNKKLLGF 136 Query: 138 RRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQF 197 LF GT++ + V+PREI AI A+ +I+AHNHPSG PS+ D +T+++IK+ Sbjct: 137 ENLFKGTVDRLAVYPREIAERAITSKATHVIVAHNHPSGNMSPSETDITLTDKLIKALAA 196 Query: 198 MDLRVLDHIVIGRGEYVSFAERGWI 222 +D+ + DHI+I + SF I Sbjct: 197 LDINLADHIIITTKGFYSFKREQVI 221 >UniRef50_A8S889 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S889_9FIRM Length = 239 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 55/212 (25%), Positives = 103/212 (48%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 RE++ +G+ +L + E L L +D +A ++++ FG +L + E+ V Sbjct: 15 RERVQSYGLDSLAEHEALEYVLYLTNAQRDTNGIAHDLIDRFGDFAAVLEASEEELCTVE 74 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+G + L + +++R Y R + + E +L ++ + E M++ LDS Sbjct: 75 GVGPSTARMLHLLPQISRYYGRSRTSTTRCIKTTEQMGSYLMAKFAWSDYERAMLVSLDS 134 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 + RV L GT + V + + ++ AIK A++L HNHP+G A PS D T Sbjct: 135 RKRVRAAVWLREGTSDRVSLDIKNVVAAAIKGGTDAVVLCHNHPNGVALPSLEDMDATGS 194 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 I ++ +++ +LDH ++ EY S + + Sbjct: 195 IARALGLVNVHLLDHFILTDTEYFSMRDANRL 226 >UniRef50_Q03EP2 DNA repair protein n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03EP2_PEDPA Length = 219 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 112/213 (52%), Gaps = 2/213 (0%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGL-LTSEYEQFSGV 69 + K+ K G L++ EL+ FL + + + + L + G + G L S+ E+ Sbjct: 8 KAKLKKVGAENLSNEELVRAFLDSFGQSQKINQLTNHFWDTIGDIAGYGLLSQNEKRKIF 67 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 I A A L+ EL RR + +L + + S+ E +E +V+ LD Sbjct: 68 KNIPDATVA-LEAGIELGRRIQKQPIHLLGKVLGSAQLGQMMVSRFQKEPQEHLLVLCLD 126 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 +++++ +F G LN EVHPREI+ E ++++A++ +L HNHPSG EPS D T+ Sbjct: 127 TKNQIKREIVVFKGGLNSAEVHPREIMVEVLRVSANSFVLIHNHPSGNIEPSTNDLAFTK 186 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++ K M +R++DH+++G Y S AE+ +I Sbjct: 187 KMKKVGDLMGIRLIDHLIVGDQSYWSAAEKRFI 219 >UniRef50_Q5FNC4 DNA repair protein RadC n=1 Tax=Gluconobacter oxydans RepID=Q5FNC4_GLUOX Length = 216 Score = 176 bits (447), Expect = 5e-43, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 109/204 (53%), Gaps = 3/204 (1%) Query: 21 ALTDVELLALF--LRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFA 78 L D LL L L TG R + L+ + FGSL +L++ + + +G+ Sbjct: 14 HLDDATLLHLLTVLFTG-RETGSVALSHNLFARFGSLAAVLSATDRELESISDMGMHMLP 72 Query: 79 QLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHR 138 ++ + E A RY R+ E L + + ++L ++L E E F ++FL+ ++ +I Sbjct: 73 MIRVLQEAALRYNRARLPPEDVLDNEQKLLDYLTARLARENIEQFRILFLNEKNSLIADE 132 Query: 139 RLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFM 198 GT+NH V+PRE+ R A++I A+AL+L HNHPSG PS+AD +T ++ + + + Sbjct: 133 AQARGTVNHTPVYPREVARRAVEIGATALVLVHNHPSGDPTPSEADLQMTMQVQAALEVV 192 Query: 199 DLRVLDHIVIGRGEYVSFAERGWI 222 + + DH +IG G + SF + Sbjct: 193 GVTIADHFIIGNGRHTSFRRSNLL 216 >UniRef50_C9M9H6 DNA repair protein RadC n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9H6_9BACT Length = 229 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 107/214 (50%), Gaps = 5/214 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K Q PRE++ + G S L+DVELLA+ +RTGT + VL LA +L FG L + Sbjct: 8 LKQLPQSSRPRERLCRLGASGLSDVELLAVLIRTGTAAQGVLELAGSLLAEFGGLRAMAQ 67 Query: 61 SEYEQF-SGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 + + + G+G AK A L EL RR + +E P L + QL E Sbjct: 68 ASPSELVQSIGGMGEAKAAALLAAFELGRR--SSNEQEGLPPLKAWLA--DWACQLRPEA 123 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 RE + F D Q R++ RL G + + ++R A++++ + L HNHP +E Sbjct: 124 REFVVAGFFDDQDRLLGDERLSYGGPDGAALDMPYLLRRAVRLDCRGVALLHNHPDRVSE 183 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEY 213 PS D+ +T+ + + +++R + H +I G Sbjct: 184 PSMEDRKLTDYLACRLELLNIRFIGHFLIVGGRV 217 >UniRef50_D1PL34 DNA repair protein RadC n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL34_9FIRM Length = 244 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 54/210 (25%), Positives = 103/210 (49%) Query: 13 KMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGI 72 ++ + G+ +L + E L L +D LA ++++FG ++ ++ E+ V GI Sbjct: 20 RVERDGLDSLAEHEALEYLLFLAIPRQDTNELAHRLIQHFGDFCKVMEADPEELKQVKGI 79 Query: 73 GVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQH 132 G + + R Y + + L E E+++ G + E+ +I LD + Sbjct: 80 GEKSARLISTVTAFGRYYALKKRKHRVALNHTEAAVEYVKPLFLGLQNELLYLILLDDKC 139 Query: 133 RVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERII 192 + R+ G N V + R+++R+ + +A+ ILAHNHP+G PS+AD + T I+ Sbjct: 140 CPVRDLRIAEGVPNRVHIDTRKLLRDVARTDATCGILAHNHPTGLPLPSEADVIATVGIM 199 Query: 193 KSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 K+ + + V+DHI++ + S RG + Sbjct: 200 KALDPLGVSVIDHIIVAGEDSCSMRARGCL 229 >UniRef50_D1Y6L3 DNA repair protein RadC n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y6L3_9BACT Length = 239 Score = 173 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 11/217 (5%) Query: 3 NNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSE 62 + PRE+++ G AL ELLA+ TG G +V+ +++E+L +GSL L + Sbjct: 4 EMNASERPRERLVTRGPEALKTEELLAILFGTGREGCNVIEMSRELLNKYGSLKNLSRAH 63 Query: 63 YEQFSG-------VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQL 115 + +G V GIG+AK L EL RR R + S + +F QL Sbjct: 64 ALELAGRNRPYDGVKGIGLAKAVTLLAALELGRRATGEEERRD----SLKSRLDFWTMQL 119 Query: 116 TGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPS 175 + +ERE + I+LD + I RL G ++ + ++R A+++N +AL L HNHP Sbjct: 120 SADEREFIIAIYLDRKDVPIADERLSYGGVDGAMLDAPYLMRRAVRLNCAALALVHNHPD 179 Query: 176 GCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGE 212 G PS D ++ + + Q + + H + G G Sbjct: 180 GDLTPSDDDLFLSRSVARMLQVLQIGYYGHYIAGGGR 216 >UniRef50_C7H3R5 Putative DNA repair protein RadC n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3R5_9FIRM Length = 241 Score = 173 bits (439), Expect = 4e-42, Method: Composition-based stats. Identities = 55/212 (25%), Positives = 106/212 (50%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 R ++ ++G+ +L E+L L KD LA +++ FG G+L + E V Sbjct: 16 RARVEQYGLESLEPHEVLEYVLYITNTRKDTNGLAHVLMDRFGDFAGVLDASEEDLLTVE 75 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+G + L + ++ R Y + + + + + E+L +Q G +E ++ LD Sbjct: 76 GVGPSTARMLHLLPQVGRYYTQCAVNGKKCMKTTDQLVEYLMAQFAGTVQERALLTALDG 135 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 + R+ L GT + V + ++++ A+K +++L HNHP+G A PS+ D + TE Sbjct: 136 RSRIKGLFWLRDGTSDRVSLEIKDVVAAALKGGTDSVVLCHNHPNGVALPSREDLMATEN 195 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 I+++ + + + DHI++ EY S E + Sbjct: 196 IVRALGLVKVHLRDHIILTESEYFSMREANRL 227 >UniRef50_Q2B8H5 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B8H5_9BACI Length = 228 Score = 173 bits (439), Expect = 4e-42, Method: Composition-based stats. Identities = 60/212 (28%), Positives = 114/212 (53%), Gaps = 8/212 (3%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 RE++ +G +L+ L + + + L+ ++ LY L E + Sbjct: 25 RERVNYYGDQYAELADLICLIIGNKAKPEVCNLLSSMTIKE---LYNLSIDELIELGLTK 81 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 + FA + A++ ++ M E L SPE ++ LT E++E F+V+ LD+ Sbjct: 82 QVAERFFATIL----FAKKINSMFMPEVECLRSPEDAYHAVK-YLTNEDQETFVVLALDT 136 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 +H++I+ + ++ GT++ VHPRE+ R A+ +A+ +I+AH HPSG PS+ D +T+R Sbjct: 137 KHQLISRKEIYKGTIDAAIVHPREVFRFALNKSAAHIIVAHQHPSGNCSPSRDDIEVTKR 196 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + K + + + + DHI++GR +Y S ++G + Sbjct: 197 LRKVGEEIGIPLSDHIIVGRNKYFSMKKQGHL 228 >UniRef50_C7JGI7 DNA repair protein RadC n=8 Tax=Acetobacter pasteurianus RepID=C7JGI7_ACEP3 Length = 249 Score = 173 bits (438), Expect = 5e-42, Method: Composition-based stats. Identities = 58/203 (28%), Positives = 103/203 (50%), Gaps = 3/203 (1%) Query: 23 TDVELLA-LFLRTGTRGKDVLTLAKEMLENFGSLYGLLTS--EYEQFSGVHGIGVAKFAQ 79 TD+ LL L + R A+ +L +GS ++ + +E + + A Sbjct: 47 TDLALLCRLIAQAQPRNAKAQEQARNLLHEYGSFSAVMAAISWHEPSKSIKALPEAVRVL 106 Query: 80 LKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRR 139 L E R R+R L +L++ + E+RE V+FL+ +H ++ Sbjct: 107 LMLAREAGLRIQRARLRRSGILADSTQLYAYLRAVMGPEKREQVRVLFLNDKHELLADDV 166 Query: 140 LFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMD 199 + GT++H V+PREI+ A+++NA+ L+L HNHPSG PS D ++T +I + + M+ Sbjct: 167 MGQGTVDHTPVYPREIVARALQLNATMLVLVHNHPSGDPTPSADDVVMTTQICGAAKIMN 226 Query: 200 LRVLDHIVIGRGEYVSFAERGWI 222 + V DHI++ + +S E G++ Sbjct: 227 IHVWDHIIVAGEKLLSMREAGFL 249 >UniRef50_C0EH16 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EH16_9CLOT Length = 226 Score = 172 bits (437), Expect = 6e-42, Method: Composition-based stats. Identities = 55/213 (25%), Positives = 103/213 (48%), Gaps = 1/213 (0%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 R++ ++ G+ + L L L D LA +L+ FGS G+L ++++ V Sbjct: 14 RKRFVQEGLDSFEVHNALELLLFNSIPRGDTNELAHILLDTFGSFSGVLDADHDNLLKVK 73 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+G L+ I EL R Y + + + E + + G +E D+ Sbjct: 74 GVGERTATLLELIPELCRLYMEDKAKPHKTYNTTEALCDLFIPKFIGRTQECVYAACFDN 133 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++I + L GT + V +EI++ A NA+ + +AHNHP G PS +D + Sbjct: 134 ASKLIACQMLAKGTADTVLFPVKEIVQFACNRNAANVAIAHNHPMGLCNPSSSDVTNSTD 193 Query: 191 IIKSCQFMDLRVLDHIVIGR-GEYVSFAERGWI 222 + ++ + + +R++DHI++G+ G+ +S E G + Sbjct: 194 LKETLRKIQIRLVDHIIVGKNGDALSLVEYGVL 226 >UniRef50_A4J365 DNA repair protein RadC n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J365_DESRM Length = 231 Score = 172 bits (437), Expect = 7e-42, Method: Composition-based stats. Identities = 52/161 (32%), Positives = 92/161 (57%) Query: 62 EYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEERE 121 E+ GIG + A+L L ++ + E + + PE ++++ ++E Sbjct: 71 SKEELMTYPGIGPSMAARLMAAFALTKKLASAGASENTVIRCPEDIFYLMKNEAKLLDKE 130 Query: 122 IFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPS 181 F + L++++ VI + GTLN VHPRE+ ++AI+ +A+A+IL HNHPSG PS Sbjct: 131 YFSALLLNTKNHVIGKETISIGTLNSSMVHPRELFKQAIRRSAAAVILVHNHPSGDPTPS 190 Query: 182 KADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + D +T+R+I++ + + + VLDHIV+G ++ S +G I Sbjct: 191 REDISLTKRLIEAGEIIGIDVLDHIVLGFDKFTSLKSKGLI 231 >UniRef50_C0GE80 DNA repair protein RadC n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GE80_9FIRM Length = 189 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 53/178 (29%), Positives = 97/178 (54%), Gaps = 2/178 (1%) Query: 45 AKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSP 104 + + + + SL L + ++ V G+G K QLK + +L++ + SP Sbjct: 14 MEYIAKEYPSLKQLSHATEKELLRVPGLGPRKAKQLKAVFDLSKALLEPD-DTSITIQSP 72 Query: 105 EMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINA 164 E + L E E + +FL+++++++ H + GTLN +HPRE+ AI+I Sbjct: 73 ADVFENFK-YLALHEEEYLVALFLNTKNKILQHTTISKGTLNTSLIHPREVFAPAIRIKC 131 Query: 165 SALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +++++ HNHPSG PS+ D IT+R+ ++ + + + +LDHIVIG +VS E+ + Sbjct: 132 ASVVILHNHPSGDPTPSREDIDITKRLKEAGKIIGIELLDHIVIGNKGFVSLREKSLL 189 >UniRef50_A0Z2T6 DNA repair protein RadC n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z2T6_9GAMM Length = 223 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 75/201 (37%), Positives = 115/201 (57%), Gaps = 7/201 (3%) Query: 23 TDVELL--ALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQL 80 +D +LL AL L GT +A M ++ GSL+ + S + G+G + QL Sbjct: 24 SDADLLSAALGLPDGTA-----AVANYMSQHRGSLFESIASLLNCDIPLTGVGRQRRYQL 78 Query: 81 KGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRL 140 LA R + E SPL P ++LQ + RE+F +FLD+Q +++ R + Sbjct: 79 SCALLLATRLAEEELFERSPLKDPGSCYKYLQHHYLLQSREVFTCLFLDTQRQLLACRDM 138 Query: 141 FSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDL 200 F GTLN V+PREI+ A+K+ ASA+I+AHNHPSGC PS AD +T+R+ ++ +D+ Sbjct: 139 FFGTLNTAPVYPREIVAMALKMGASAIIVAHNHPSGCLAPSVADIQLTDRLRRALGLIDI 198 Query: 201 RVLDHIVIGRGEYVSFAERGW 221 +LDH+++ +G Y+S A G Sbjct: 199 DLLDHLIVAQGRYLSMASEGL 219 >UniRef50_B0MUL4 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MUL4_9BACT Length = 214 Score = 169 bits (430), Expect = 5e-41, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 114/211 (54%), Gaps = 5/211 (2%) Query: 13 KMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENF-GSLYGLLTSEYEQFSGVHG 71 K+L G+ LTD ELL L L G D LA +L +F G L L ++ + G Sbjct: 7 KLLSRGVETLTDQELLELLLDDG----DSERLAGALLSSFEGRLAALGYADIARLRMAAG 62 Query: 72 IGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQ 131 IG+ + A+++ EL RR R P+ S + LT + E ++L++ Sbjct: 63 IGLKRAARIQAAVELGRRVLAARELGPDPIGSSNDVVRIFRPLLTEMKHEECWCLYLNTG 122 Query: 132 HRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERI 191 +R++ +R+ G + V R +I+ A+++ A+ +IL HNHPSG A PS+ DK++T++I Sbjct: 123 NRIVERQRVSQGGVQATVVDHRLVIKRALELLATQIILVHNHPSGAALPSEQDKILTKKI 182 Query: 192 IKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++ D+R+LDH++I RG SF + G + Sbjct: 183 AEAAALFDIRLLDHLIIARGGEYSFRQSGLL 213 >UniRef50_C0R372 DNA repair protein RadC, putative n=11 Tax=Wolbachia RepID=C0R372_WOLWR Length = 218 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 54/210 (25%), Positives = 109/210 (51%), Gaps = 2/210 (0%) Query: 13 KMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGI 72 ++L+ AL D E++ FL +AK ++ + + +L E + + G+ Sbjct: 11 RILESKGKALLDREIMETFLSAVHESPQAQEIAKNLVNTYTGVGRILGREMDDLKVIEGV 70 Query: 73 GVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQH 132 + A + + E R +++ E P++ + E+L + ERE +++L+ + Sbjct: 71 TDSAVAMIMCVKETLERVLKEKLKSE-PIMDLQGIVEYLNVSIGHSERECVKILYLNKRR 129 Query: 133 RVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERII 192 ++I + G + V+ +EI R+A+ NA+++I++HNHP G EPS+ D+ +T+ + Sbjct: 130 QLIGEES-YIGEMEKAPVYIKEITRKALMKNATSIIMSHNHPGGSLEPSEEDQAVTKSLA 188 Query: 193 KSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +C + +++ DHI+I G Y SF E G + Sbjct: 189 AACSTVSVKLFDHIIITSGGYFSFRENGLL 218 >UniRef50_C1TLK8 DNA repair protein radc n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TLK8_9BACT Length = 214 Score = 166 bits (421), Expect = 5e-40, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 113/207 (54%) Query: 4 NSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEY 63 ++ +PRE++ + G +AL DVELLA+ LRTG G+DVL L++ +L+ FG L GL + Sbjct: 1 MTEDQLPRERLFRNGATALNDVELLAILLRTGGGGEDVLGLSESILDGFGGLGGLTRASV 60 Query: 64 EQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIF 123 +++ GIG AK A L E+ RR R+ S LS + +Q +L+ E RE Sbjct: 61 KEYLSFKGIGGAKAASLAAAVEIGRRLAIYNGRDPSRPLSWRDELKDIQVRLSDEPREFI 120 Query: 124 MVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKA 183 + IFL + R ++ + G + + R +R A++++A ++L HNHP G E S Sbjct: 121 VAIFLGDRERFLSKEMISFGGPDGASLDIRHFMRVAVRLDAYGVVLVHNHPDGSLESSAE 180 Query: 184 DKLITERIIKSCQFMDLRVLDHIVIGR 210 D+ +T + + + +R H ++ R Sbjct: 181 DRTLTRIVRERLDALGIRFHGHYIVSR 207 >UniRef50_C5V0A3 DNA repair protein RadC n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0A3_9PROT Length = 205 Score = 166 bits (421), Expect = 5e-40, Method: Composition-based stats. Identities = 69/205 (33%), Positives = 111/205 (54%), Gaps = 8/205 (3%) Query: 19 ISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFA 78 +L+ +LL + + L+ L + + H A A Sbjct: 8 AQSLSTPDLLTMLVG----KDKAQALSHTSLSVLFGMRASRQTTVVCEKQPHY---APAA 60 Query: 79 QLKGIAELARRYYNVRMREESPLLS-PEMTREFLQSQLTGEEREIFMVIFLDSQHRVITH 137 + EL R + + + L+ P +++L+ L G ++E+F+V+FLD+QHR+I Sbjct: 61 IISAAKELVMRALSEDITQNPINLNNPVEVKKYLKLLLGGRQQEVFVVLFLDTQHRLIAA 120 Query: 138 RRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQF 197 LF GTL V+PRE+++ A+ NA+A++LAHNHPSG AEPS+AD+L+T + ++ Sbjct: 121 EELFHGTLTQTSVYPREVVKRALMHNAAAVLLAHNHPSGLAEPSQADQLLTNALKQALAL 180 Query: 198 MDLRVLDHIVIGRGEYVSFAERGWI 222 +D+R LDH +IG +SFAERG I Sbjct: 181 VDVRALDHFIIGDESALSFAERGLI 205 >UniRef50_B4RG10 DNA repair protein RadC n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RG10_PHEZH Length = 256 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 2/204 (0%) Query: 19 ISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFA 78 + L+D EL+A + R +D A+ LE+ G L L + IG Sbjct: 54 AAQLSDAELVARVIDPRRRSRDSEARARLCLESCGGLGPALALADPRLE--RQIGAEACL 111 Query: 79 QLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHR 138 QL+ + E + R + + + T ++L++ L E RE F VIFLD+ + Sbjct: 112 QLRLVREASIRTTRGAVISRRFDANAKRTHDYLRALLEFETRESFRVIFLDASGAWSSDE 171 Query: 139 RLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFM 198 L GT++H V+ RE++REA++ +A+AL+L HNHPSG PS AD +T I + + Sbjct: 172 ELGRGTVDHAPVYVREVMREALRRDAAALVLVHNHPSGDPTPSAADVQVTSEIAAAASAL 231 Query: 199 DLRVLDHIVIGRGEYVSFAERGWI 222 + V DH+V+G SF G + Sbjct: 232 GMSVKDHLVVGSHGVASFQALGLL 255 >UniRef50_B0MNH0 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MNH0_9FIRM Length = 228 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 99/216 (45%), Gaps = 4/216 (1%) Query: 11 REKML----KFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQF 66 RE+M+ +FG ELL + L + + D +A +++ FG+L G+ ++ + Sbjct: 6 RERMISRLKEFGSEGFQSHELLEMMLYSSFKQCDTNPIAHRLIDRFGTLSGVFSASENEL 65 Query: 67 SGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVI 126 V G+G + + + R +++ L + +++ + E +I Sbjct: 66 CEVEGVGRSTAQMIIVLRANIERMLAESVQKGEMLGASGAVKDYCMGLFRFVDTEQLRMI 125 Query: 127 FLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKL 186 FLDS++ ++ + +G L V ++ +A++ +++ HNHP G PS DK+ Sbjct: 126 FLDSEYCFMSQEIISTGALEQVRPDIMRLLEKAVQKRCPIVVMTHNHPRGSEMPSTEDKI 185 Query: 187 ITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +T + + + + DH+++G +S E G + Sbjct: 186 MTRNLFNLLEKAGIYLADHVIVGMHGSLSMRENGIL 221 >UniRef50_Q2GEH3 DNA repair protein RadC n=2 Tax=Neorickettsia RepID=Q2GEH3_NEOSM Length = 236 Score = 164 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 98/187 (52%) Query: 36 TRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRM 95 D+ LAK +L+ FG L ++ + V+G+ A A ++ + E + + Sbjct: 50 HPRIDIKPLAKSLLKEFGDFKKLFAADPDDLRSVNGVSDAVVALIRTVRESMKAILRKDL 109 Query: 96 REESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREI 155 + L S + ++L+ + + E V+FL+ ++ +I G +H + REI Sbjct: 110 TSRTTLKSWKSVVDYLRLSIGNKPVETIRVLFLNKKYTLIREYVQELGAADHTPLCMREI 169 Query: 156 IREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVS 215 I++ + ASA+++AHNHPSG PS+ D LIT ++ K CQ +D++++DH ++ ++ S Sbjct: 170 IKKCLTCGASAMVIAHNHPSGNPLPSQEDLLITGKLKKICQKVDVQLVDHFIVTPHDHFS 229 Query: 216 FAERGWI 222 F G + Sbjct: 230 FVVNGLL 236 >UniRef50_B1ZYU3 DNA repair protein RadC n=3 Tax=Verrucomicrobia RepID=B1ZYU3_OPITP Length = 199 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 64/167 (38%), Positives = 97/167 (58%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 P+E++ +FG +AL+D ELLA+ LR+GT G+DVLTLA ++ GSL GL+ + F Sbjct: 5 DRPQERLEQFGPTALSDTELLAMLLRSGTHGQDVLTLATRLIAEAGSLAGLIAWKESDFR 64 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 + GIG K QL + E+A+R + E L ++ + L G + E F V+ Sbjct: 65 RLKGIGRVKALQLVTVVEIAKRVLIQKSEESPVLNRADLVADHLFPLARGLQVEKFWVLC 124 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHP 174 L+ ++R++ + SGT HPRE+ REAI+ +ASA+I AHN Sbjct: 125 LNRKNRLLRRVEVTSGTATAALAHPREVFREAIRESASAVICAHNLC 171 >UniRef50_A9AE97 DNA repair protein n=8 Tax=Bacteria RepID=A9AE97_BURM1 Length = 169 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 63/159 (39%), Positives = 103/159 (64%) Query: 64 EQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIF 123 G + A I E AR+ + +M+ SP +++L+++L G E E+F Sbjct: 11 APLMLRDSRGRYRQASADQILEAARQVIDQKMQRGDEFTSPAAVKDYLRAKLAGFEHEVF 70 Query: 124 MVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKA 183 V+FLD++HR+I + +F GT++ EVHPRE+++EA+++NA+A+I++HNHPSG EPS A Sbjct: 71 AVLFLDTRHRLIDYAEMFRGTIDSAEVHPREVVKEALRLNAAAVIISHNHPSGNPEPSAA 130 Query: 184 DKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 D+ +T ++ ++ +D+R LDHI++ G SFAERG I Sbjct: 131 DRAMTSQLRQALALVDVRTLDHIIVAGGTTTSFAERGLI 169 >UniRef50_C1QC41 DNA repair protein n=2 Tax=Brachyspira RepID=C1QC41_9SPIR Length = 227 Score = 163 bits (414), Expect = 4e-39, Method: Composition-based stats. Identities = 57/208 (27%), Positives = 112/208 (53%), Gaps = 1/208 (0%) Query: 15 LKFGISALTDV-ELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIG 73 L+F + L D ++LA + G + T+ ++ +F +LY ++ + ++ V G+ Sbjct: 10 LQFSNADLVDEKQILASIISNGISLERANTIVDKLYYSFYNLYNIVNASDKELLRVKGLN 69 Query: 74 VAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHR 133 K +K I + Y ++ ++P +L +L + E F ++ LD + Sbjct: 70 DKKIKLIKSIPSILEYYLLSSLKADTPNFKKRDLINYLIIKLGKLKFETFSIVCLDVNKK 129 Query: 134 VITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIK 193 I+ +F GT++ ++PR+++ +++ + +S +I++HNHPSG A+PSK D IT + K Sbjct: 130 FISMEHIFRGTIDSATIYPRDLVEKSLSLGSSYVIVSHNHPSGIAKPSKEDINITNVLYK 189 Query: 194 SCQFMDLRVLDHIVIGRGEYVSFAERGW 221 + + +D+++LDHI+I Y SF E G Sbjct: 190 AFKMVDIKMLDHIIIAANSYYSFREDGM 217 >UniRef50_B8H0Z9 DNA repair protein radC n=1 Tax=Caulobacter crescentus NA1000 RepID=B8H0Z9_CAUCN Length = 221 Score = 163 bits (412), Expect = 6e-39, Method: Composition-based stats. Identities = 62/170 (36%), Positives = 96/170 (56%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 RE+ K G AL D EL+ LFL DV LAK +L FGSL G+L + E+ V Sbjct: 46 RERAAKGGFVALPDYELIELFLFRTFPRGDVKPLAKALLTRFGSLDGVLGATVEELRTVQ 105 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+G A LK + E+A R ++ + + S +++ L E RE F V+FLD Sbjct: 106 GVGEAAAMDLKLLHEVALRAGRDKIAKRPVISSWSALLAYVRVALANESREQFRVLFLDK 165 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 ++++I L GT++H V+PRE++R A+++++S +I+ HNHP+ P Sbjct: 166 KNQLIADEVLNRGTVDHAPVYPREVMRRALELSSSNIIILHNHPTCPLSP 215 >UniRef50_B6JJV2 DNA repair protein RadC n=5 Tax=Alphaproteobacteria RepID=B6JJV2_OLICO Length = 205 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 50/165 (30%), Positives = 95/165 (57%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 R++ + G AL+D ELL + L +DV LAK ++ FGS + + + V Sbjct: 28 RDRFREAGPDALSDYELLEMVLFRALPRRDVKPLAKALITRFGSFAEAVHAPEARLKEVS 87 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+G A ++K IA A R ++++ + L S ++ ++ + ++E F ++FLD Sbjct: 88 GLGDAAITEMKLIAATASRVAKGQVKQRTMLSSWASVIDYCRATMAFSDKEQFRILFLDK 147 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPS 175 ++++I GT++H V+PRE+++ A++++A+A+IL HNHP+ Sbjct: 148 RNQLIADELQQVGTVDHTPVYPREVVKRALELSATAIILVHNHPT 192 >UniRef50_Q04U23 DNA repair protein n=4 Tax=Leptospira RepID=Q04U23_LEPBJ Length = 232 Score = 161 bits (407), Expect = 2e-38, Method: Composition-based stats. Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 3/206 (1%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PR + + + +L D ELLA+ L G R + + L++E+L GLL + + Sbjct: 17 PRTR-IAYEAESLEDWELLAVLLGRGNRAQPIEELSREILHQSKGFGGLLQKQVSDLRKI 75 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+G+AK L E ARR ++ S E FL + L + RE F++I L Sbjct: 76 PGVGIAKATTLLAAVEFARRLKWEALKGRR--YSSEQLLNFLATSLIPKNRECFVLITLS 133 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 + V+ + G+L V V R++++ + AS++I+AHNHP ++PSK D I E Sbjct: 134 PEGAVLRAEIVAVGSLEEVGVQTRDLLKIILNDAASSVIIAHNHPESSSKPSKEDLWIFE 193 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVS 215 + + L +LD + G S Sbjct: 194 NFGRLLDMIGLELLDQWIFGIDGIYS 219 >UniRef50_C7NDB9 DNA repair protein RadC n=4 Tax=Fusobacteriaceae RepID=C7NDB9_LEPBD Length = 240 Score = 160 bits (405), Expect = 3e-38, Method: Composition-based stats. Identities = 61/213 (28%), Positives = 115/213 (53%), Gaps = 1/213 (0%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 R++ L G D ELL L L K+ +AK +L+ +G LY +L E+ Sbjct: 28 RQRFLSTGTKGFLDYELLELLLTYTVIRKNCRGIAKNLLKKYGDLYTILQQSEEELQKNK 87 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPE-MTREFLQSQLTGEEREIFMVIFLD 129 + LK ++E+ ++ + ++ +L+ L + E+F V+FL+ Sbjct: 88 YMTERTVVFLKLLSEIIENGLYKKIHNKKISITSNIKLLNYLKCSLLKRDIEVFKVLFLN 147 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 +Q+ ++ LF GT++ ++ RE+I++ ++ NA ++IL HNHP+G +PS +D L+T+ Sbjct: 148 TQNELMKEEELFYGTIDRSTIYIRELIKKILEYNAKSVILVHNHPAGSLKPSDSDILLTK 207 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++ + + M++R+LDH++I Y SF E G + Sbjct: 208 KVKEVFESMEIRLLDHLIISEQGYFSFLEGGIL 240 >UniRef50_Q2S8K4 DNA repair protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S8K4_HAHCH Length = 207 Score = 159 bits (404), Expect = 5e-38, Method: Composition-based stats. Identities = 67/171 (39%), Positives = 104/171 (60%), Gaps = 4/171 (2%) Query: 56 YGLLTSEYEQFSGVHGIGVAKFAQLKG---IAELARRYYNVRMREESPLLSPEMTREFLQ 112 + + +Q +H G +F Q I +A+ + R P+ T+ +L Sbjct: 35 RSYMNEDVQQHYSIHEDGSYQFNQAIHPDKIISIAKHILDGRFFRGKAFCDPDATKYYLV 94 Query: 113 SQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHN 172 QL E+E+F +FLD+Q+R+I+ +LF GT++ V+PREI++ A+ +NA+A+ILAHN Sbjct: 95 LQLAEHEQEVFACMFLDNQNRLISFEKLFYGTIDQASVYPREIVKRALMLNAAAVILAHN 154 Query: 173 HPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIG-RGEYVSFAERGWI 222 HPSG +EPS AD +T+ + S +D+RVLDHIV+G G VSF ERG++ Sbjct: 155 HPSGMSEPSVADIAMTKTVKSSLALIDVRVLDHIVVGSDGSSVSFIERGYM 205 >UniRef50_A8L178 DNA repair protein RadC n=3 Tax=Actinomycetales RepID=A8L178_FRASN Length = 220 Score = 159 bits (403), Expect = 6e-38, Method: Composition-based stats. Identities = 67/213 (31%), Positives = 101/213 (47%), Gaps = 1/213 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K+ PRE+ L G AL D ELLAL L +G+ G D + LA ++ G LY L Sbjct: 3 VKDLPIRERPRERALAAGAEALADRELLALLLGSGSPGCDAVDLAGRLIARHGGLYELSR 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 ++ ++ G+G AK A++ L RR + L S E L G Sbjct: 63 ADPQELIAQPGVGPAKAARVCAAFHLGRR-ARPPAAGATGLTSTAALAEAAAPLLRGLRG 121 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E +V+ D ++ R L G H + R+++ ++ SA +AHNHP G EP Sbjct: 122 ERVVVVVCDGNAGILRARLLTQGASGHSPLSMRDLLGYVLRCGGSAFGVAHNHPDGNPEP 181 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEY 213 S D+ +T R+ +S + LR LDH+VI + Sbjct: 182 SADDRRVTTRLRESAALLGLRFLDHVVITDETW 214 >UniRef50_C0R3D5 DNA repair protein RadC n=2 Tax=Wolbachia RepID=C0R3D5_WOLWR Length = 219 Score = 159 bits (403), Expect = 6e-38, Method: Composition-based stats. Identities = 57/210 (27%), Positives = 115/210 (54%), Gaps = 3/210 (1%) Query: 13 KMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGI 72 ++L +L D ELL L G+ +AK+++E F SL ++ +++ + V G+ Sbjct: 13 RILSSRGRSLLDHELLERTLSECEEGR---EVAKKLIELFSSLGRVINADFHELKNVTGM 69 Query: 73 GVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQH 132 A + + E+ R ++++ S L + E ++ ++ + +E VI+LD Sbjct: 70 NDGAIASIFCLKEIFDRILKGKLKKLSILDNREELLKYFKTAIGQSRKESLRVIYLDRSG 129 Query: 133 RVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERII 192 +I GT++ V ++ REII++ + I+AS++ ++HNHPSG EPSK D+ T + Sbjct: 130 HLIYEYIQDCGTIDRVPLYVREIIKQGLLIDASSIAISHNHPSGDTEPSKEDEDNTLTLA 189 Query: 193 KSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +C+ + ++++DHI++ + + SF + G + Sbjct: 190 ATCENVGMKLIDHIIVTQKSHFSFYDSGLL 219 >UniRef50_D1AWS8 DNA repair protein RadC n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AWS8_STRM9 Length = 211 Score = 158 bits (400), Expect = 1e-37, Method: Composition-based stats. Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 7/203 (3%) Query: 24 DVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGI 83 D ELL + K A E+++ +G + +L E F + + + +K + Sbjct: 12 DFELLLNLIELVENRKIAKLQASEIIKKYGGISNILR---EDFKVIENMNILSKKTMKIL 68 Query: 84 AELARRY----YNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRR 139 ++ Y +N EE + E ++L+ Q ERE+F V++ ++++ +I Sbjct: 69 ENVSLIYNHILFNECFGEEKKISCFEDLVKYLKFQYVDMEREVFKVLYFNTKNVLIKDEN 128 Query: 140 LFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMD 199 +F GT++ V+ REI++ +K NA ++I+ HNHPSG EPS D+ +T++II + +D Sbjct: 129 IFYGTIDKSVVYVREIVKNILKYNAKSIIIVHNHPSGNLEPSNDDRCLTKKIIDVLKLID 188 Query: 200 LRVLDHIVIGRGEYVSFAERGWI 222 +R+ DHI+I Y SF E G I Sbjct: 189 VRLSDHIIISNKGYYSFLENGQI 211 >UniRef50_P52140 UPF0758 protein yfjY n=148 Tax=Enterobacteriaceae RepID=YFJY_ECOLI Length = 160 Score = 157 bits (397), Expect = 3e-37, Method: Composition-based stats. Identities = 58/144 (40%), Positives = 96/144 (66%), Gaps = 3/144 (2%) Query: 79 QLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHR 138 +K L R+ S + R++L+ ++ G ERE FM+++L+ Q+++I H Sbjct: 20 TVKRALTLLDRHLRE---TGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHE 76 Query: 139 RLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFM 198 LF+G+++ EVHPRE+++ A+ NA+A+ILAHNHPSG PS+ADK IT+R++++ Q + Sbjct: 77 TLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLV 136 Query: 199 DLRVLDHIVIGRGEYVSFAERGWI 222 D+RV DH+++G + SFAE G + Sbjct: 137 DIRVPDHLIVGGRQIYSFAEHGLL 160 >UniRef50_Q9KR57 UPF0758 protein VC_1786 n=59 Tax=Proteobacteria RepID=Y1786_VIBCH Length = 158 Score = 157 bits (397), Expect = 3e-37, Method: Composition-based stats. Identities = 66/140 (47%), Positives = 95/140 (67%), Gaps = 1/140 (0%) Query: 83 IAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFS 142 + E A R E T E+L+ +L G E EIF V+FLD+QHR+I + LF Sbjct: 20 VLEEAAEILEQRYVRGETFARTENTTEYLRCKLAGYEHEIFAVLFLDNQHRLIEFKELFR 79 Query: 143 GTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRV 202 GT++ V+PRE+++EA+ +NA+A+I AHNHPSG EPS+AD+ IT+R+ + +D+RV Sbjct: 80 GTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADRRITQRLKDALSLVDIRV 139 Query: 203 LDHIVIGRGEYVSFAERGWI 222 LDH+V+G+ VSFAERGW+ Sbjct: 140 LDHVVVGKSS-VSFAERGWL 158 >UniRef50_Q9KUK8 UPF0758 protein VC_0510 n=11 Tax=Gammaproteobacteria RepID=Y510_VIBCH Length = 157 Score = 155 bits (393), Expect = 9e-37, Method: Composition-based stats. Identities = 58/140 (41%), Positives = 93/140 (66%), Gaps = 1/140 (0%) Query: 83 IAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFS 142 I E A R L +P+ T+E+++ +L ERE+F ++ LD+Q+R+I + LF Sbjct: 19 ILEHAAEILANRYVRGDALTNPDATKEYVRCKLGSYEREVFALLLLDNQNRLIEFKELFQ 78 Query: 143 GTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRV 202 GT++ V+PRE+++ +++NA+A+I AHNHPSG + PS+AD+ ITER+ + +D+RV Sbjct: 79 GTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADRRITERLKDTLALVDVRV 138 Query: 203 LDHIVIGRGEYVSFAERGWI 222 LDH ++ SFAERGW+ Sbjct: 139 LDH-IVTGDTCTSFAERGWL 157 >UniRef50_B4X5D3 DNA repair protein RadC n=4 Tax=Alcanivorax sp. DG881 RepID=B4X5D3_9GAMM Length = 164 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 59/133 (44%), Positives = 89/133 (66%) Query: 90 YYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVE 149 + L +P +FLQ L E+ E+F IFL+++H+V++ LFSGT++ Sbjct: 32 ILLNELTGREALTAPTDVAQFLQMALAQEKNEVFAAIFLNNKHKVLSFEPLFSGTIDGAA 91 Query: 150 VHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIG 209 V+PR ++++A+ NA+A+I AHNHPSGC EPS+AD+ IT R+ + +D+RVLDH V+ Sbjct: 92 VYPRVVVQQALACNAAAVIFAHNHPSGCCEPSQADRTITTRLKDALALIDVRVLDHFVVS 151 Query: 210 RGEYVSFAERGWI 222 R E+VS AERGW+ Sbjct: 152 RSEWVSLAERGWL 164 >UniRef50_A0R7V6 DNA repair protein RadC n=5 Tax=Desulfuromonadales RepID=A0R7V6_PELPD Length = 168 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 54/140 (38%), Positives = 84/140 (60%), Gaps = 7/140 (5%) Query: 89 RYYNVRMREESP------LLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFS 142 RY +RE++P SP+ E + L E +E F+ + LD ++R++ R+ Sbjct: 30 RYRKEAVREDAPEWVTTRFTSPKQVFELFK-DLIYETKEHFITLHLDGKNRIMCMDRVSI 88 Query: 143 GTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRV 202 G+LN VHPRE+ + A+ NA+A+I H HPSG PS D IT+R+ ++ + M +RV Sbjct: 89 GSLNQSIVHPREVFKTALLSNAAAIICVHQHPSGDPNPSSEDLSITKRLKEAGEIMGIRV 148 Query: 203 LDHIVIGRGEYVSFAERGWI 222 LDHIV+G +Y+SF E+G + Sbjct: 149 LDHIVVGHEDYISFVEKGLM 168 >UniRef50_C4LDH2 DNA repair protein RadC n=2 Tax=Aeromonadaceae RepID=C4LDH2_TOLAT Length = 165 Score = 154 bits (391), Expect = 1e-36, Method: Composition-based stats. Identities = 63/148 (42%), Positives = 92/148 (62%) Query: 75 AKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRV 134 A K I +ARR R+ + + P +LQ+ + E E+F +FLD+QHR+ Sbjct: 18 ASPVTEKDILIMARRLAKNRLAKGCSIERPSSAFIYLQALMGNYENEVFGSLFLDNQHRI 77 Query: 135 ITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKS 194 I LF GTLN +HPRE+++ A+ +NA+A+I HNHPSG EPS+ADK IT ++ ++ Sbjct: 78 ICFEELFRGTLNVTNIHPREVVKRALAVNAAAVIFVHNHPSGEPEPSEADKKITVQLRET 137 Query: 195 CQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +D+RVLDHIV+G +S AERG + Sbjct: 138 LNLIDVRVLDHIVVGAKACISMAERGLV 165 >UniRef50_C8U0Q3 Predicted DNA repair protein n=21 Tax=Enterobacteriaceae RepID=C8U0Q3_ECO10 Length = 180 Score = 154 bits (391), Expect = 1e-36, Method: Composition-based stats. Identities = 61/144 (42%), Positives = 99/144 (68%), Gaps = 3/144 (2%) Query: 79 QLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHR 138 ++ L +Y + S R++L+ L +ERE+FMV++LD+QHR++ Sbjct: 40 TIRRAMNLLDKYLR---QPGIAFTSSTAARDWLRLHLARQEREVFMVLYLDNQHRLLESE 96 Query: 139 RLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFM 198 LF+G++NHV+VH RE+++ A++ NA+A++LAHNHPSG EPS+ D+ IT R+ ++ + + Sbjct: 97 TLFAGSVNHVQVHSREVVKSALRFNAAAVVLAHNHPSGDPEPSQCDRNITGRLKEALELV 156 Query: 199 DLRVLDHIVIGRGEYVSFAERGWI 222 D++ LDH+V+GR VSFAERGW+ Sbjct: 157 DVKTLDHLVVGRDGIVSFAERGWL 180 >UniRef50_C7JGI6 DNA repair protein RadC n=9 Tax=Acetobacter RepID=C7JGI6_ACEP3 Length = 274 Score = 154 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 18/220 (8%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 R+++L G ++L D ELL + L G KD LAK ++ FGSL +L + E + Sbjct: 51 RQRVLAQGAASLADYELLEMLLYVGIPRKDTKPLAKNLINVFGSLPAVLEAGEENLRQIS 110 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+ A A L+ IA +A R L + + E+ L R +FLDS Sbjct: 111 GVTRASAAVLQDIAYVADRLPESGEETRQFLGNWDSILEYADVYLAKATRGQVRALFLDS 170 Query: 131 QHRVITHR----RLFSGTLNHVEVHPRE----IIREAIKINASALILAHNHPSGCAEPSK 182 ++++I L G + R+ +++ A+ ++A AL+ AE Sbjct: 171 RNQLIADEAVPAFLHEGRSHEAMASIRQAVALVLQRALALHACALVTV----DLVAEDQT 226 Query: 183 ADKLITER------IIKSCQFMDLRVLDHIVIGRGEYVSF 216 D+ + + + +S + + V +HI IG GE+ SF Sbjct: 227 LDQTLAQNASFVRELQRSAPLLAVEVHEHIAIGCGEWRSF 266 >UniRef50_A4SUN7 DNA repair protein n=2 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SUN7_AERS4 Length = 296 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 67/141 (47%), Positives = 91/141 (64%) Query: 81 KGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRL 140 K I LA R L SPEM E+L+++ E E F +I LD+QHRVI L Sbjct: 22 KRIIALAHSIIARRFTRLDSLNSPEMVVEYLKTRFATLEHETFAMILLDNQHRVINAVDL 81 Query: 141 FSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDL 200 GT++ V+PRE+++ A+K NA+A+ILAHNHPSG AEPS+AD+ ITER+ + +D+ Sbjct: 82 SHGTIDSAAVYPREVVKTALKHNAAAVILAHNHPSGVAEPSRADRQITERLQAALDLVDI 141 Query: 201 RVLDHIVIGRGEYVSFAERGW 221 RVLDHIV+ +SFA RG+ Sbjct: 142 RVLDHIVVAGENSMSFAVRGF 162 >UniRef50_A1K759 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=A1K759_AZOSB Length = 196 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 68/204 (33%), Positives = 108/204 (52%), Gaps = 15/204 (7%) Query: 19 ISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFA 78 +AL D LL F G +DV GS ++ E + Sbjct: 8 PTALADAALLERFF--GPEAEDVWEGCD------GSWSKVVELAREPRTPAWD------- 52 Query: 79 QLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHR 138 L E+ R + ++ + L SP + R+FL++ G+ EIF+V++LD+Q+R+I Sbjct: 53 ALACAIEILHRSFAEQLSARNVLDSPGVVRQFLRTFFEGKPYEIFVVLYLDAQNRLIRAE 112 Query: 139 RLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFM 198 F GTL V+PREI+R +++++A+ +I +H HPSG EPS AD+++T + + + Sbjct: 113 EAFRGTLTQTSVYPREILRRSLELHAAGVIFSHQHPSGVCEPSSADEVLTNMLKSALTLV 172 Query: 199 DLRVLDHIVIGRGEYVSFAERGWI 222 D+RVLDHIV+ VSFAE G + Sbjct: 173 DVRVLDHIVVAGDRAVSFAETGRL 196 >UniRef50_B3HA66 DNA repair protein RadC n=3 Tax=Enterobacteriaceae RepID=B3HA66_ECOLX Length = 157 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 69/140 (49%), Positives = 100/140 (71%) Query: 83 IAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFS 142 I R + LS + T+ +LQ L +ERE+F+V++LD+Q+R++ H LF Sbjct: 18 IRRAMRLLEKYQRNPGESFLSSDATKTWLQLHLARQEREMFVVLYLDNQNRLLEHETLFL 77 Query: 143 GTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRV 202 GT+N EVHPREI++ A++ NA+A+ILAHNHPSG AEPS+AD+LIT I+K+ +++RV Sbjct: 78 GTINSTEVHPREIVKSALRHNAAAVILAHNHPSGVAEPSRADRLITTNIVKTLDLVNVRV 137 Query: 203 LDHIVIGRGEYVSFAERGWI 222 LDH +IG G+ +SFAERGW+ Sbjct: 138 LDHFIIGAGDVLSFAERGWL 157 >UniRef50_C6J5M2 DNA repair protein RadC n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J5M2_9BACL Length = 162 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 53/156 (33%), Positives = 91/156 (58%), Gaps = 2/156 (1%) Query: 67 SGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVI 126 S ++ + + Q + + EL R+ + +P + + + L G ++E FM++ Sbjct: 9 SQLNALPPRRRKQAEKLLELIRKVMEGEKDH--YIHTPADVFQAVATDLVGLDKEHFMIL 66 Query: 127 FLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKL 186 L++++R+++ + GTLN VHPRE+ + AI A+++I HNHPSG PS DK Sbjct: 67 ILNTKNRILSKEVISIGTLNSAIVHPREVFKPAIIKGAASIICVHNHPSGDPAPSSEDKK 126 Query: 187 ITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +TER+I++ + + + VLDH+VIG YVS E+G I Sbjct: 127 LTERLIQAGEIIGIDVLDHVVIGTEGYVSLKEQGMI 162 >UniRef50_A6SWN0 DNA repair protein RadC n=14 Tax=Proteobacteria RepID=A6SWN0_JANMA Length = 190 Score = 153 bits (387), Expect = 4e-36, Method: Composition-based stats. Identities = 57/128 (44%), Positives = 89/128 (69%) Query: 95 MREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPRE 154 ++ L SP+ +++L+ QL E+RE+F V+F+D+QHRV+ + LF GT++ V+PR Sbjct: 62 IKHGPKLTSPKDVKDYLRLQLLNEKREVFAVVFMDTQHRVLAYEPLFFGTIHQTSVYPRA 121 Query: 155 IIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYV 214 I++ A+ +NA+++ILAHNHPSG PS+ADK +T R+ + +D+RVLDH +IG Sbjct: 122 IVQRAMSLNAASMILAHNHPSGSTHPSEADKQLTNRLKSLLESIDVRVLDHFIIGEEGTF 181 Query: 215 SFAERGWI 222 SFAE G + Sbjct: 182 SFAEHGLL 189 >UniRef50_A7FEQ9 DNA repair protein, RadC family n=4 Tax=Yersinia RepID=A7FEQ9_YERP3 Length = 162 Score = 153 bits (387), Expect = 5e-36, Method: Composition-based stats. Identities = 56/146 (38%), Positives = 88/146 (60%), Gaps = 6/146 (4%) Query: 77 FAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVIT 136 +Q I E+ R L SPE + +LQ L + RE FMV+FLD++HR++ Sbjct: 21 ISQALAILEIQLR------HRPYTLTSPEAVKAWLQLHLRPQGRECFMVLFLDNRHRLMA 74 Query: 137 HRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQ 196 + GT N V+PRE++ A+ +A+++AHNHP+G PS+AD+ +T +++ + Sbjct: 75 SETVSVGTFNATTVYPREVVIRALHHRCAAVVIAHNHPAGDPTPSQADRTLTAQLVNALN 134 Query: 197 FMDLRVLDHIVIGRGEYVSFAERGWI 222 +D+RVLDH++IG E VS AE GW+ Sbjct: 135 MVDIRVLDHLIIGESEPVSLAELGWL 160 >UniRef50_C5D8D2 DNA repair protein RadC n=4 Tax=Firmicutes RepID=C5D8D2_GEOSW Length = 169 Score = 153 bits (386), Expect = 6e-36, Method: Composition-based stats. Identities = 46/149 (30%), Positives = 85/149 (57%), Gaps = 6/149 (4%) Query: 74 VAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHR 133 LK + E + + E + SPE + L+ L +RE F+V+ LD++++ Sbjct: 27 RVNIVSLKLVRE------SSVLYRERQIKSPEDAYKLLKPFLVEADREKFVVVCLDTKNQ 80 Query: 134 VITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIK 193 G+LN VHPRE+ + AI N++++I+AHNHPS PS+ D +T+R+++ Sbjct: 81 PTAINICHIGSLNSSIVHPREVFKSAILSNSASIIVAHNHPSSDPTPSREDIEVTKRLVE 140 Query: 194 SCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + + + + +LDH+++ ++VS E+G+I Sbjct: 141 AGRIVGIELLDHLIVCEEKFVSLKEKGYI 169 >UniRef50_C2E2B4 DNA repair protein RadC n=8 Tax=Lactobacillus jensenii RepID=C2E2B4_9LACO Length = 207 Score = 152 bits (385), Expect = 7e-36, Method: Composition-based stats. Identities = 71/206 (34%), Positives = 105/206 (50%), Gaps = 17/206 (8%) Query: 23 TDVELL-ALFLRTGTRGKDVLT-----LAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAK 76 TD ELL +F+ G L + LENFG +Y LTS + Sbjct: 13 TDQELLNEIFILLEEAGIKSFAELNNVLLNKKLENFGQIYDYLTS-----CQIDD----- 62 Query: 77 FAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVIT 136 L L +R VR R+ +S ++L + G E+E +VI+LD++++V+ Sbjct: 63 -ELLSRTITLLKRLKAVRTRKLIQFVSSHEVGKYLIDRFLGVEQEQLVVIYLDNKNKVLG 121 Query: 137 HRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQ 196 R LF GT+N VHPR+I R A+ N+ +++AHNHPSG A PS+ D T++I K+ Sbjct: 122 ERLLFQGTVNRSVVHPRDIFRWAVFYNSVGILIAHNHPSGDANPSQKDIEFTKQINKASD 181 Query: 197 FMDLRVLDHIVIGRGEYVSFAERGWI 222 M + LDHI++ Y+SF E I Sbjct: 182 LMGINFLDHIIVADRSYLSFKEEQLI 207 >UniRef50_Q5E054 DNA repair protein RadC n=3 Tax=Gammaproteobacteria RepID=Q5E054_VIBF1 Length = 157 Score = 152 bits (385), Expect = 8e-36, Method: Composition-based stats. Identities = 62/140 (44%), Positives = 92/140 (65%), Gaps = 1/140 (0%) Query: 83 IAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFS 142 I E A R +P T+ +L+ +L ERE+F V+ LD+QHR+I + LF Sbjct: 19 ILEHAAEILANRYVRGDAFSNPTATQNYLRYKLGHYEREVFAVLLLDNQHRLIEFKELFQ 78 Query: 143 GTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRV 202 GT++ V+PRE+++ +++NA+A+I AHNHPSG + PS+ADK IT R+ ++ +D++V Sbjct: 79 GTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGESTPSQADKRITTRLKEALALIDVQV 138 Query: 203 LDHIVIGRGEYVSFAERGWI 222 LDHIV+G VSFAERG I Sbjct: 139 LDHIVVGE-TCVSFAERGLI 157 >UniRef50_Q7UT53 RadC n=1 Tax=Rhodopirellula baltica RepID=Q7UT53_RHOBA Length = 208 Score = 152 bits (384), Expect = 9e-36, Method: Composition-based stats. Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 25/221 (11%) Query: 9 MPREKMLKFG------ISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSE 62 MP+ K G + +D ELLAL LR+ +A + + + Sbjct: 1 MPKAKPTYVGKLVSPRVKEKSDKELLALVLRSQFER-----VANR------KVREIAQAS 49 Query: 63 YEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE--- 119 + G+ + +L EL +R + L S F +S + Sbjct: 50 KAEL----GLTDIAYERLMAGIELGKRVGEAKTNFNERLTSTHKAVAFCRSHFSRLIAEG 105 Query: 120 -REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCA 178 +E F ++ LD++HR+I R+ GTL+ VHPRE+ R AI+ S ++LAHNHPSG Sbjct: 106 LQEEFHIVTLDTKHRMIDSHRITVGTLDASLVHPREVFRPAIRDACSCVLLAHNHPSGDP 165 Query: 179 EPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAER 219 PS+ D +T+++ + + + + LDHIV+ R +S E+ Sbjct: 166 TPSREDFKVTQQLTEVGKVIGITALDHIVLARENCLSLREQ 206 >UniRef50_A9HJN5 DNA repair protein RadC n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HJN5_GLUDA Length = 221 Score = 152 bits (384), Expect = 9e-36, Method: Composition-based stats. Identities = 56/175 (32%), Positives = 91/175 (52%), Gaps = 8/175 (4%) Query: 52 FGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGI----AELARRYYNVRMREESPLLSPEMT 107 FG++ + ++ + + VA Q++ I E A R R+R+ L + Sbjct: 51 FGTIGAVFAADPAELASA----VAGRLQIRVIVPLLREAAIRLMRARIRQGDLLSCHDAL 106 Query: 108 REFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASAL 167 +LQ+ L + E F V+FLD R+I L GT++ V+PRE++R AI++ AS L Sbjct: 107 MAYLQASLARDTVEQFRVLFLDRGTRLIADEVLAQGTIDQTPVYPREVMRRAIQLKASEL 166 Query: 168 ILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 IL HNHP PS+ D +T R+ + + L V DH+++G G +SF + G + Sbjct: 167 ILVHNHPGWNPTPSREDIAMTRRLAQIATVLGLTVRDHVIVGNGASISFRQAGLL 221 >UniRef50_D2NHT0 Putative phage DNA repair protein n=1 Tax=Escherichia coli SE15 RepID=D2NHT0_ECOLX Length = 156 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 58/143 (40%), Positives = 88/143 (61%), Gaps = 4/143 (2%) Query: 80 LKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRR 139 L ++ RYY + L SP+ R + +L E E F +I LD+Q++++ Sbjct: 18 LDQARDIISRYY----QRGVQLCSPDDVRRCVMVELAPLEHEEFGIILLDNQNQLLHREI 73 Query: 140 LFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMD 199 LF GTLN V VHPRE+I+ +K NA+A+IL HNHPSG EPS+ D +T+++ + + +D Sbjct: 74 LFRGTLNSVSVHPREVIKRVLKHNAAAVILVHNHPSGEPEPSRCDIQLTKKLQELLEILD 133 Query: 200 LRVLDHIVIGRGEYVSFAERGWI 222 +R+LDH ++ E VS AERG + Sbjct: 134 VRLLDHFIVAGTETVSMAERGLV 156 >UniRef50_B1I0K4 DNA repair protein radC-like protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1I0K4_LYSSC Length = 204 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 47/166 (28%), Positives = 87/166 (52%), Gaps = 1/166 (0%) Query: 57 GLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLT 116 L + + G+ + +++ + L + + R + + + E++ ++ Sbjct: 40 DLFDMTIVELQDI-GLSRKEALRIRAVKGLLKIMNSERQGKVKSISNASEAAEYVMDEMK 98 Query: 117 GEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSG 176 ++E F+ +FLD++ RVI +F G+LN PREI+R A+K +A+ +I HNH SG Sbjct: 99 NLKQEHFVCLFLDTRSRVIKKETIFIGSLNSSIASPREIMRLALKYSAAGIICLHNHCSG 158 Query: 177 CAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +EPS D +T R+ ++ M + ++DHIVIG E+ S E + Sbjct: 159 DSEPSMQDLEVTRRLFEAGDLMGVELIDHIVIGNNEFTSIRENNLL 204 >UniRef50_B9ECC3 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9ECC3_MACCJ Length = 150 Score = 151 bits (383), Expect = 1e-35, Method: Composition-based stats. Identities = 41/134 (30%), Positives = 73/134 (54%) Query: 88 RRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNH 147 ++YY E + SP+ +F + + RE F+++ L++++ + +F GT+N Sbjct: 16 KQYYRKTRDERIKVKSPDNVADFCKKLIGNSVREKFLLVGLNTKNEITFVYTVFIGTINM 75 Query: 148 VEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIV 207 +HPRE+ + AI + +++ILAH HPS PS D+ T+R + + + + VLDHI+ Sbjct: 76 SPIHPREVFQVAILNSCASIILAHCHPSDDPTPSSEDREATKRFEECGELLGIPVLDHII 135 Query: 208 IGRGEYVSFAERGW 221 + Y SF E Sbjct: 136 VTESSYFSFRENNL 149 >UniRef50_B4Y2Y7 RadC n=1 Tax=Aquabacterium sp. PL1F5 RepID=B4Y2Y7_9BURK Length = 198 Score = 151 bits (382), Expect = 1e-35, Method: Composition-based stats. Identities = 58/146 (39%), Positives = 91/146 (62%) Query: 77 FAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVIT 136 +L EL R +M E + SP++ +++L G E E+F+V++LD+Q +I Sbjct: 53 AHKLSIARELLLRNMRSKMLEGPVMASPKVVKDWLSMYCAGLEHEVFLVLYLDAQQVLIE 112 Query: 137 HRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQ 196 LF GTL V+PRE+++ A+ NA+A++LAHNHPSG PS AD+L+T+ + S Sbjct: 113 AEELFRGTLTQTSVYPREVVKNALAHNAAAVLLAHNHPSGQLSPSGADELLTQTLKSSLM 172 Query: 197 FMDLRVLDHIVIGRGEYVSFAERGWI 222 +D+RVLDH ++G +SFAE+G + Sbjct: 173 MVDVRVLDHFIVGGDRVLSFAEQGLL 198 >UniRef50_Q7VMM9 Conserved possible DNA repair protein n=1 Tax=Haemophilus ducreyi RepID=Q7VMM9_HAEDU Length = 157 Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 58/151 (38%), Positives = 89/151 (58%), Gaps = 4/151 (2%) Query: 72 IGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQ 131 + AK + E R Y + E+ Q QL EERE+F V+F D+Q Sbjct: 11 LNQAKALYENVLRETGIRSYASNPSFGDE----KEASEYCQMQLGFEEREVFGVLFWDTQ 66 Query: 132 HRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERI 191 +R+I +LF GT+N +HPREI+++A+++N+SA+IL HNHPSG PS++DK T +I Sbjct: 67 NRLIRFEKLFFGTINQASIHPREIVKKALELNSSAVILTHNHPSGQVTPSQSDKQTTAKI 126 Query: 192 IKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++CQ +D+ VLDHI++ + SF + Sbjct: 127 KQACQLIDVNVLDHIIVSATDTYSFCMHQLM 157 >UniRef50_Q47ZW8 DNA repair protein, RadC family protein n=20 Tax=Gammaproteobacteria RepID=Q47ZW8_COLP3 Length = 158 Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 61/147 (41%), Positives = 91/147 (61%), Gaps = 1/147 (0%) Query: 76 KFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVI 135 K I + A + + S + T++FL+ +L +E EIF V+ LD+QH++I Sbjct: 13 KPMTENQILDAAAEILACKYVRKDAFTSSQATKDFLRFKLANKEHEIFAVMLLDNQHQMI 72 Query: 136 THRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSC 195 LF GT++ V+PRE+++ + NA+A+IL HNHPSG PS ADK IT+R+ ++ Sbjct: 73 DFVELFRGTIDASAVYPREVVKTVLLENAAAVILTHNHPSGLNSPSIADKDITKRLQEAL 132 Query: 196 QFMDLRVLDHIVIGRGEYVSFAERGWI 222 +D+RVLDHI+IG G Y SFAE G + Sbjct: 133 ALIDVRVLDHIIIGEGTY-SFAENGLL 158 >UniRef50_Q0ACW7 DNA repair protein RadC n=2 Tax=Proteobacteria RepID=Q0ACW7_NITEC Length = 173 Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 59/150 (39%), Positives = 92/150 (61%) Query: 73 GVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQH 132 G A + I R + + + PE+ ++ +++L G E E+F +IFL+SQ+ Sbjct: 24 GRYTVASDEMIFTATRAAIERKYPANTAMTKPEIAADYFKNKLNGFEHEVFSIIFLNSQY 83 Query: 133 RVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERII 192 R+I +R +F GTL V+PRE+++ AI NA+A+ILAH HPS EPS+ADK IT+R+ Sbjct: 84 RLIAYREMFQGTLTCASVYPREVVKAAISYNAAAVILAHCHPSKETEPSQADKAITKRLK 143 Query: 193 KSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++ +D+ VLDHI++G S AE G + Sbjct: 144 EALDLIDVCVLDHIIVGGNTTKSMAEMGLV 173 >UniRef50_Q2SAN5 DNA repair protein n=2 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SAN5_HAHCH Length = 183 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 50/140 (35%), Positives = 88/140 (62%), Gaps = 1/140 (0%) Query: 83 IAELARRYYNVR-MREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLF 141 + + A+R R R + P +E+L L E RE F+ +FLD+Q+R+I + LF Sbjct: 31 VLKAAKRALAQRFKRHSCHMDDPGKVKEYLMMHLAPEPRETFVGLFLDTQNRLIAYEVLF 90 Query: 142 SGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLR 201 G ++ ++PRE+++ A++ NA+ +I+AHNHPSG +PS D+LIT R++++ +++ Sbjct: 91 RGAIDEAHIYPREVVKAALRHNAAKVIVAHNHPSGDPKPSVNDQLITYRLLQALMLVEIP 150 Query: 202 VLDHIVIGRGEYVSFAERGW 221 ++DH V+G + VS A +G Sbjct: 151 LIDHFVVGGDQVVSMAAQGI 170 >UniRef50_Q04B84 DNA repair protein n=2 Tax=Lactobacillus delbrueckii subsp. bulgaricus RepID=Q04B84_LACDB Length = 204 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 53/141 (37%), Positives = 79/141 (56%), Gaps = 1/141 (0%) Query: 80 LKGIAELAR-RYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHR 138 L E+A R MR S +L ++L G+++E F V++ D Q ++ + Sbjct: 61 LSLTIEVAMDRLRRTDMRRSSDWAGSSKIGNYLANKLLGQKQEQFWVLYFDQQQNLLGEK 120 Query: 139 RLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFM 198 LF GTL+ VHPREI R A+ +++I+AHNHPSG PS D +T+ + K+ + M Sbjct: 121 MLFQGTLDRSWVHPREIFRWAVVYGCASIIVAHNHPSGALTPSDNDLELTKGLKKASKIM 180 Query: 199 DLRVLDHIVIGRGEYVSFAER 219 + LDH +IG GEY+S ER Sbjct: 181 KITFLDHFIIGGGEYLSLRER 201 >UniRef50_Q3BQ28 RadC family DNA repair protein n=5 Tax=Xanthomonas RepID=Q3BQ28_XANC5 Length = 187 Score = 150 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 56/132 (42%), Positives = 89/132 (67%) Query: 90 YYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVE 149 R++ + + SP+ ++L S+ E+F V+FLD +H+++ LF GT++ E Sbjct: 55 ILEQRLQRQGKIHSPDQAGDYLISRCAHLPHEVFGVVFLDIKHQILATEHLFFGTIDGCE 114 Query: 150 VHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIG 209 VHPR + + A+ +NA+A+IL HNHPSG EPS+AD+ +TER+ K+ +D+RVLDH+VIG Sbjct: 115 VHPRVVAKRALDLNAAAVILFHNHPSGNPEPSEADRKVTERLQKALSLLDIRVLDHLVIG 174 Query: 210 RGEYVSFAERGW 221 +++S A RGW Sbjct: 175 GRQHISLAARGW 186 >UniRef50_C6E4Z0 DNA repair protein RadC n=3 Tax=Geobacter RepID=C6E4Z0_GEOSM Length = 167 Score = 150 bits (380), Expect = 3e-35, Method: Composition-based stats. Identities = 47/128 (36%), Positives = 76/128 (59%), Gaps = 2/128 (1%) Query: 95 MREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPRE 154 ++ + S + + L E +E F+ + LD ++R++ + +G+LN VHPRE Sbjct: 42 LKPNTRYTSASQVFDTF-TFLRHETKEHFIALHLDGKNRIVCIDMVSTGSLNQSIVHPRE 100 Query: 155 IIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYV 214 + + A+ +A+A+IL HNHP+G PS D IT R+ ++ + + +RVLDHI+IG Y Sbjct: 101 LFKTALLSSAAAVILLHNHPTGDPTPSTEDLTITRRLQEAGELIGIRVLDHIIIGDN-YY 159 Query: 215 SFAERGWI 222 SF ERG I Sbjct: 160 SFTERGNI 167 >UniRef50_B8KQ45 DNA repair protein RadC n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KQ45_9GAMM Length = 177 Score = 150 bits (379), Expect = 4e-35, Method: Composition-based stats. Identities = 55/140 (39%), Positives = 86/140 (61%) Query: 83 IAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFS 142 I E A R+ L SP R++ Q QL E E F +FL +QH I+ F Sbjct: 38 IIEKALALLESRLINSDALTSPVRVRQYCQLQLGHERDEHFACLFLTAQHHAISFEIQFR 97 Query: 143 GTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRV 202 G+++ V+PR I+R +++NA+A+IL HNHPSG +EPS AD+ IT R+ ++ + +D+RV Sbjct: 98 GSIDGAAVYPRVIVRRCLELNAAAVILVHNHPSGVSEPSPADRQITVRLQRALELIDVRV 157 Query: 203 LDHIVIGRGEYVSFAERGWI 222 +DH+++ G+ SFA+ G + Sbjct: 158 VDHLIVSAGDATSFAQAGLL 177 >UniRef50_B1IPT7 DNA repair protein RadC n=3 Tax=Enterobacteriaceae RepID=B1IPT7_ECOLC Length = 159 Score = 149 bits (378), Expect = 4e-35, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 90/122 (73%) Query: 101 LLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAI 160 S R++L+ QL ERE F +FLD+QHR+I H LF+GT+NH +VHPRE+++ + Sbjct: 38 FTSSHAVRDWLRLQLASLEREEFTALFLDNQHRLIAHETLFTGTINHTQVHPREVVKAGL 97 Query: 161 KINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 K N +A+I+AH+HPSG AEPSKAD+ +T RI ++ +D+R+LDH+V+G E SFA+RG Sbjct: 98 KHNCAAVIVAHSHPSGEAEPSKADRQVTTRIQQALDLVDIRLLDHLVVGGMEITSFADRG 157 Query: 221 WI 222 W+ Sbjct: 158 WL 159 >UniRef50_C6DAT0 DNA repair protein RadC n=5 Tax=Enterobacteriaceae RepID=C6DAT0_PECCP Length = 157 Score = 149 bits (378), Expect = 5e-35, Method: Composition-based stats. Identities = 65/142 (45%), Positives = 97/142 (68%), Gaps = 4/142 (2%) Query: 81 KGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRL 140 + L +R + + E T+ +L +L+ ERE+FMV++LD+QHR+I + Sbjct: 20 MALCLLEKRVR----KNARQFKTSEDTKSWLMLELSNLEREVFMVLYLDNQHRLIEKEVI 75 Query: 141 FSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDL 200 G +N EVHPREI++ +++ NA+A+ILAHNHPSG AEPS+AD+ IT+R+ S +D+ Sbjct: 76 ALGGINSTEVHPREILKASLRHNAAAVILAHNHPSGWAEPSQADRNITDRLKDSLSQLDV 135 Query: 201 RVLDHIVIGRGEYVSFAERGWI 222 +VLDH+V+G E VSFAERGW+ Sbjct: 136 KVLDHLVVGSTEVVSFAERGWL 157 >UniRef50_B4S9N8 DNA repair protein RadC n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S9N8_PROA2 Length = 165 Score = 149 bits (378), Expect = 5e-35, Method: Composition-based stats. Identities = 51/113 (45%), Positives = 76/113 (67%) Query: 110 FLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALIL 169 F + L + E F ++LD+++++I + GTLN VHPRE+ + A NA++++L Sbjct: 53 FCKIGLQDKASEEFYALYLDTKNKIIGLEMISRGTLNASLVHPREVFKGAFLANANSIML 112 Query: 170 AHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 AHNHPSG EPS ADKL+T R++K+ + +DL+VLDHI++G Y SF E G I Sbjct: 113 AHNHPSGNTEPSSADKLVTSRLVKAGKLLDLQVLDHIIVGDKGYYSFRESGLI 165 >UniRef50_Q042N7 DNA repair protein n=7 Tax=Lactobacillus RepID=Q042N7_LACGA Length = 206 Score = 149 bits (376), Expect = 8e-35, Method: Composition-based stats. Identities = 62/223 (27%), Positives = 113/223 (50%), Gaps = 25/223 (11%) Query: 7 LLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLT---LAKEM----LENFGSLYGLL 59 + M +E++L+ TDV+L+ R+ + KD++T L K++ + +F L+ Sbjct: 2 IFMKKEELLQ------TDVDLVKKLARS-LKEKDIITFDSLFKKLEEVGINSFKELWQYA 54 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 S + L+ + E R V +E L S ++ +L G Sbjct: 55 ASPKCE--------DEIAVVLQLMLE---RVKGVNNKEIESLYSSSQVGCYIADKLCGRP 103 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 +E I+LDS++++I + +F GT+N HPR+I R A+ N++A +AHNHPSG + Sbjct: 104 QEELYGIYLDSKNKIIAEKLIFQGTVNRAVAHPRDIFRWAVIYNSTAFFVAHNHPSGDEQ 163 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS+ D T++++++ + M + LDH ++ Y+SF E + Sbjct: 164 PSQHDLRFTKKLVEASKCMGIDFLDHFIVTDNTYLSFREMELL 206 >UniRef50_Q5DY97 DNA repair protein RadC n=17 Tax=Proteobacteria RepID=Q5DY97_VIBF1 Length = 165 Score = 149 bits (376), Expect = 8e-35, Method: Composition-based stats. Identities = 64/142 (45%), Positives = 94/142 (66%) Query: 81 KGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRL 140 K I A V++R S L SP++ E ++L +ERE+F ++ LD+QHR+I Sbjct: 24 KMILAEAASIIEVKIRNTSALTSPDLAAELCVNRLVHQEREVFAILMLDNQHRLIKFVEH 83 Query: 141 FSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDL 200 G+++ V+PRE+++ + NA+A+I AHNHPSG AEPS AD+ IT R+ + + +D+ Sbjct: 84 SVGSISSASVYPREVLKSVLHYNAAAVIFAHNHPSGVAEPSDADRRITARLSSALELIDV 143 Query: 201 RVLDHIVIGRGEYVSFAERGWI 222 +VLDH VIG GE VSFA+RGWI Sbjct: 144 KVLDHFVIGVGETVSFAKRGWI 165 >UniRef50_C5SDF8 DNA repair protein RadC n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SDF8_CHRVI Length = 167 Score = 148 bits (374), Expect = 1e-34, Method: Composition-based stats. Identities = 56/125 (44%), Positives = 92/125 (73%) Query: 98 ESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIR 157 + L SP+ TR++L+ +L G E+F V+ LD++HRV+ ++ LF GT++ VHPRE++R Sbjct: 43 QEALTSPDATRDYLKLRLYGLTYEVFAVLLLDNRHRVLRYQELFRGTIDTAYVHPREVVR 102 Query: 158 EAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFA 217 I+ A+A+I AHNHPSG ++PS+AD+ +T ++ + +++RVLDHI++G G +SFA Sbjct: 103 LVIESGAAAVIFAHNHPSGSSDPSQADRTLTRKLQDALALIEVRVLDHIIVGEGRGMSFA 162 Query: 218 ERGWI 222 E+GW+ Sbjct: 163 EQGWL 167 >UniRef50_Q9LAI3 RadC (Fragment) n=2 Tax=Firmicutes RepID=Q9LAI3_BACSQ Length = 119 Score = 148 bits (374), Expect = 1e-34, Method: Composition-based stats. Identities = 46/119 (38%), Positives = 76/119 (63%) Query: 104 PEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKIN 163 PE ++ L +R+ F+VI LD++++ G+LN VHPRE+++ AI N Sbjct: 1 PEDAYNLVKCFLVDVDRDYFLVICLDTKNQPTAINICHVGSLNASLVHPREVMKPAILSN 60 Query: 164 ASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++++I+AHNHPS PSK D +T+R+I++ + M + +LDHIV+G +YVS E+ +I Sbjct: 61 SASVIVAHNHPSLDPTPSKEDINVTKRLIEAGRIMGIDILDHIVVGGNKYVSLKEKRYI 119 >UniRef50_Q3JDF2 DNA repair protein RadC n=4 Tax=Gammaproteobacteria RepID=Q3JDF2_NITOC Length = 171 Score = 147 bits (372), Expect = 2e-34, Method: Composition-based stats. Identities = 60/142 (42%), Positives = 93/142 (65%) Query: 81 KGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRL 140 + + ELA + + L SP TR+FL+ L + E+F ++LD++HRVI L Sbjct: 30 QSLLELAFAVLHDLHQPGVELPSPNHTRDFLRMLLAERKAEVFGCLYLDNRHRVIETVEL 89 Query: 141 FSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDL 200 F GT++ V+PR ++++A+ +NA+A++ HNHPSG AEPS AD+ IT R+ ++ +D+ Sbjct: 90 FQGTIDGASVYPRVVVQQALSVNAAAVMFFHNHPSGVAEPSNADEAITRRLKEALALVDI 149 Query: 201 RVLDHIVIGRGEYVSFAERGWI 222 RVLDH V+ GE +SFAERG + Sbjct: 150 RVLDHFVVTAGESISFAERGLL 171 >UniRef50_B5V5B9 RadC n=5 Tax=Firmicutes RepID=B5V5B9_BACCE Length = 168 Score = 147 bits (372), Expect = 2e-34, Method: Composition-based stats. Identities = 51/146 (34%), Positives = 85/146 (58%), Gaps = 6/146 (4%) Query: 77 FAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVIT 136 +LK I E + Y R++ SPE + L G +RE F+V+ LD +++ T Sbjct: 29 IVKLKMIKESSLLYKERRVK------SPEDASLLFRQFLDGADREYFIVLCLDIKNQPTT 82 Query: 137 HRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQ 196 G+LN VHPRE+++ AI NA+++I+AHNHPS PS D +T+R+I++ + Sbjct: 83 INVCHIGSLNSSIVHPREVLKPAIISNAASIIVAHNHPSNDPTPSSEDLEVTKRLIEAGK 142 Query: 197 FMDLRVLDHIVIGRGEYVSFAERGWI 222 + + VLDH+++ +VS E+G++ Sbjct: 143 VVGIEVLDHLIVCEESFVSLKEKGYM 168 >UniRef50_B3TB70 Putative RadC, DNA repair protein n=1 Tax=uncultured marine microorganism HF4000_APKG8L7 RepID=B3TB70_9ZZZZ Length = 195 Score = 147 bits (372), Expect = 3e-34, Method: Composition-based stats. Identities = 45/156 (28%), Positives = 82/156 (52%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 + R + ++ G AL D ELL L L DV LAK+++E FG G++++ E Sbjct: 18 MRLRTRFMEGGEEALADYELLELMLFQANARVDVKPLAKQLIERFGGFTGVVSASPEALR 77 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 + G+G A LK + A R E+ + S + + + + + E F+V+F Sbjct: 78 EIKGVGDAAIVVLKSVRAAAVRLAREETLEQPVISSWDRRLAYCRVSMAHDRTERFLVLF 137 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKIN 163 LD+++++I +GT+NH V+PRE+++ A+++ Sbjct: 138 LDTKNKIIHDEVQQTGTVNHTPVYPREVVKRALEVG 173 >UniRef50_B0RXB0 DNA repair protein radC homolog n=3 Tax=Xanthomonas campestris pv. campestris str. B100 RepID=B0RXB0_XANCB Length = 159 Score = 147 bits (371), Expect = 3e-34, Method: Composition-based stats. Identities = 56/132 (42%), Positives = 89/132 (67%) Query: 90 YYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVE 149 R++ + + SP+ +L ++ EIF V+FLD+QH ++ LFSGT++ E Sbjct: 27 ILEQRLQRQGRIHSPDQAGSYLVARCAHLSHEIFGVVFLDNQHHILAAEHLFSGTIDGCE 86 Query: 150 VHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIG 209 +HPR + + A+++NA+A+IL HNHPSG EPS+AD+ +T+R+ ++ +D+RVLDH+VIG Sbjct: 87 IHPRVVAKRALELNAAAVILFHNHPSGNPEPSEADRKVTQRLQEALGLLDIRVLDHLVIG 146 Query: 210 RGEYVSFAERGW 221 + VS A RGW Sbjct: 147 GQKSVSLAARGW 158 >UniRef50_Q8VR59 Putative intergenic-region protein n=24 Tax=Escherichia RepID=Q8VR59_ECOLX Length = 260 Score = 146 bits (369), Expect = 5e-34, Method: Composition-based stats. Identities = 51/107 (47%), Positives = 78/107 (72%) Query: 116 TGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPS 175 R F V++L++Q+++I LF+GT+N EVHPRE+I+ A+ NA+A++LAHNHPS Sbjct: 154 AFGVRMEFRVLYLNNQNKLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPS 213 Query: 176 GCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 G PSKAD+LITER++++ +D+RV DH+++G + SFAE G + Sbjct: 214 GEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 260 >UniRef50_Q0AJV4 DNA repair protein RadC n=18 Tax=Proteobacteria RepID=Q0AJV4_NITEC Length = 167 Score = 146 bits (368), Expect = 6e-34, Method: Composition-based stats. Identities = 60/142 (42%), Positives = 91/142 (64%), Gaps = 4/142 (2%) Query: 81 KGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRL 140 + IA L R + L P+ R++L+ +L E E+F+ +FL+SQH+V+ L Sbjct: 29 QAIALLEHRVFKA----GPTLDGPKAVRDYLRLKLMAEPNEVFVAVFLNSQHQVLACECL 84 Query: 141 FSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDL 200 F GT++ V+PR +++ A+++NASALI +H HPSG AEPS AD+ IT R+ +D+ Sbjct: 85 FKGTVSEASVYPRVVVQRALELNASALIFSHQHPSGVAEPSMADRAITNRLKFILSMIDI 144 Query: 201 RVLDHIVIGRGEYVSFAERGWI 222 RV+DH +IG+GE SFAE G + Sbjct: 145 RVVDHFIIGKGEPYSFAESGLL 166 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B5EXE3 UPF0758 protein yicR n=116 Tax=Enterobacteriacea... 258 1e-67 UniRef50_A4W511 UPF0758 protein Ent638_0101 n=3 Tax=Enterobacter... 257 3e-67 UniRef50_B2UAP0 UPF0758 protein Rpic_2712 n=3 Tax=Burkholderiace... 255 9e-67 UniRef50_A7MQ95 UPF0758 protein ESA_04094 n=32 Tax=Bacteria RepI... 254 2e-66 UniRef50_B2FJW1 UPF0758 protein Smlt0399 n=129 Tax=Proteobacteri... 254 2e-66 UniRef50_B0UUW7 UPF0758 protein HSM_0009 n=10 Tax=Pasteurellacea... 254 2e-66 UniRef50_B5YIR9 DNA repair protein n=1 Tax=Thermodesulfovibrio y... 252 7e-66 UniRef50_Q46XP0 UPF0758 protein Reut_A2732 n=12 Tax=Proteobacter... 251 2e-65 UniRef50_D1JB12 Probable DNA repair protein radC homolog n=2 Tax... 249 4e-65 UniRef50_B3E339 UPF0758 protein Glov_0523 n=8 Tax=Desulfuromonad... 248 8e-65 UniRef50_A1SR15 UPF0758 protein Ping_0056 n=2 Tax=Gammaproteobac... 248 8e-65 UniRef50_Q3A8G4 UPF0758 protein Pcar_0065 n=2 Tax=Bacteria RepID... 248 9e-65 UniRef50_A9VIS8 UPF0758 protein BcerKBAB4_4299 n=107 Tax=Firmicu... 248 1e-64 UniRef50_Q31EB6 UPF0758 protein Tcr_1917 n=5 Tax=Gammaproteobact... 247 3e-64 UniRef50_Q1AVT6 UPF0758 protein Rxyl_1530 n=3 Tax=Bacteria RepID... 247 3e-64 UniRef50_B2A699 DNA repair protein RadC n=1 Tax=Natranaerobius t... 246 4e-64 UniRef50_A6TQH8 UPF0758 protein Amet_2289 n=54 Tax=cellular orga... 246 5e-64 UniRef50_A5UDB6 UPF0758 protein CGSHiEE_07200 n=30 Tax=Gammaprot... 246 5e-64 UniRef50_C9L5T8 DNA repair protein RadC n=4 Tax=Clostridiales Re... 244 1e-63 UniRef50_Q21TE2 UPF0758 protein Rfer_3252 n=12 Tax=cellular orga... 243 3e-63 UniRef50_Q46A65 UPF0758 protein Mbar_A2303 n=2 Tax=Methanosarcin... 243 4e-63 UniRef50_D0MFA0 DNA repair protein RadC n=1 Tax=Rhodothermus mar... 242 5e-63 UniRef50_Q4UPP0 UPF0758 protein XC_3944 n=35 Tax=Proteobacteria ... 242 5e-63 UniRef50_C6LCB9 DNA repair protein RadC n=3 Tax=Clostridiales Re... 242 6e-63 UniRef50_C9Y8Q3 DNA repair protein radC homolog n=1 Tax=Curvibac... 241 1e-62 UniRef50_C5TNC6 DNA repair protein RadC n=3 Tax=Neisseria RepID=... 240 2e-62 UniRef50_A8R890 Putative uncharacterized protein n=1 Tax=Eubacte... 240 4e-62 UniRef50_B2V090 UPF0758 protein CLH_0547 n=18 Tax=Clostridium Re... 239 6e-62 UniRef50_A6QHJ5 UPF0758 protein NWMN_1555 n=52 Tax=Staphylococcu... 238 7e-62 UniRef50_Q3AF80 UPF0758 protein CHY_0341 n=1 Tax=Carboxydothermu... 238 1e-61 UniRef50_C7GE95 DNA repair protein RadC n=2 Tax=Roseburia RepID=... 238 1e-61 UniRef50_A9IU27 UPF0758 protein Bpet3149 n=5 Tax=Bordetella RepI... 238 1e-61 UniRef50_B4RM65 UPF0758 protein NGK_1225 n=25 Tax=Neisseriaceae ... 237 1e-61 UniRef50_A5FMW5 UPF0758 protein Fjoh_0413 n=33 Tax=Bacteroidetes... 237 2e-61 UniRef50_A5KLJ1 Putative uncharacterized protein n=5 Tax=Clostri... 237 3e-61 UniRef50_Q82ZX1 UPF0758 protein EF_2926 n=40 Tax=Firmicutes RepI... 237 3e-61 UniRef50_Q6F7Z8 UPF0758 protein ACIAD3126 n=19 Tax=Proteobacteri... 236 3e-61 UniRef50_A1B4F1 UPF0758 protein Pden_2304 n=44 Tax=Alphaproteoba... 236 4e-61 UniRef50_Q2S042 UPF0758 protein SRU_2338 n=1 Tax=Salinibacter ru... 236 4e-61 UniRef50_C8WXL6 DNA repair protein RadC n=3 Tax=Alicyclobacillus... 235 6e-61 UniRef50_A5ZRS6 Putative uncharacterized protein n=5 Tax=Clostri... 235 7e-61 UniRef50_C7PSZ0 DNA repair protein RadC n=1 Tax=Chitinophaga pin... 234 2e-60 UniRef50_A3ER13 DNA repair protein (RadC) n=3 Tax=Leptospirillum... 234 2e-60 UniRef50_A5FRP1 DNA repair protein RadC n=6 Tax=cellular organis... 234 2e-60 UniRef50_A9KL05 DNA repair protein RadC n=7 Tax=Clostridiales Re... 233 3e-60 UniRef50_Q4FQM6 UPF0758 protein Psyc_1834 n=3 Tax=Moraxellaceae ... 233 4e-60 UniRef50_D1R5B1 Putative uncharacterized protein n=1 Tax=Parachl... 233 5e-60 UniRef50_UPI000185C66E DNA repair protein RadC n=1 Tax=Capnocyto... 232 6e-60 UniRef50_B9E733 DNA repair protein RadC homolog n=1 Tax=Macrococ... 232 7e-60 UniRef50_C7RDS9 DNA repair protein RadC n=3 Tax=Anaerococcus Rep... 232 7e-60 UniRef50_B4CZF8 DNA repair protein RadC n=2 Tax=Verrucomicrobia ... 232 9e-60 UniRef50_C7M9C6 DNA repair protein RadC n=1 Tax=Capnocytophaga o... 231 1e-59 UniRef50_Q6MAB0 UPF0758 protein pc1765 n=1 Tax=Candidatus Protoc... 231 2e-59 UniRef50_C4Z083 DNA repair protein RadC n=1 Tax=Eubacterium elig... 231 2e-59 UniRef50_B7C9V0 Putative uncharacterized protein n=1 Tax=Eubacte... 230 4e-59 UniRef50_Q0AWG3 UPF0758 protein Swol_1642 n=12 Tax=Firmicutes Re... 229 5e-59 UniRef50_Q64AS5 DNA repair proteins n=1 Tax=uncultured archaeon ... 229 6e-59 UniRef50_D2BJ47 DNA repair protein n=5 Tax=Dehalococcoides RepID... 228 1e-58 UniRef50_A1BHA1 UPF0758 protein Cpha266_1761 n=11 Tax=Chlorobiac... 228 1e-58 UniRef50_B7ANR2 Putative uncharacterized protein n=1 Tax=Bactero... 227 2e-58 UniRef50_A6DS55 DNA repair protein RadC n=1 Tax=Lentisphaera ara... 227 3e-58 UniRef50_C9LCX8 DNA repair protein RadC n=1 Tax=Prevotella tanne... 227 3e-58 UniRef50_Q2LSS5 DNA repair protein n=1 Tax=Syntrophus aciditroph... 227 3e-58 UniRef50_D2MNQ5 Putative DNA repair protein RadC n=1 Tax=Bulleid... 227 3e-58 UniRef50_B9L1S0 DNA repair protein radC homolog n=4 Tax=Bacteria... 226 5e-58 UniRef50_D1QST5 DNA repair protein RadC n=13 Tax=Bacteroidales R... 225 6e-58 UniRef50_B9Y7M6 Putative uncharacterized protein n=1 Tax=Holdema... 225 6e-58 UniRef50_Q38XC8 UPF0758 protein LCA_0852 n=1 Tax=Lactobacillus s... 225 7e-58 UniRef50_C0BM81 DNA repair protein RadC n=2 Tax=Bacteroidetes Re... 225 7e-58 UniRef50_D1VVJ8 DNA repair protein RadC-like protein n=1 Tax=Pep... 225 7e-58 UniRef50_C7GYN9 DNA repair protein RadC n=1 Tax=Eubacterium saph... 225 1e-57 UniRef50_Q3JV52 UPF0758 protein BURPS1710b_1139 n=75 Tax=Proteob... 223 3e-57 UniRef50_UPI0001C34E02 DNA repair protein RadC n=1 Tax=Clostridi... 223 3e-57 UniRef50_B5Y6A0 UPF0758 protein COPRO5265_1522 n=1 Tax=Coprother... 223 3e-57 UniRef50_A5IM26 UPF0758 protein Tpet_1235 n=7 Tax=Thermotogaceae... 223 3e-57 UniRef50_B9XSW5 DNA repair protein RadC n=1 Tax=bacterium Ellin5... 223 3e-57 UniRef50_Q2J299 UPF0758 protein RPB_0700 n=15 Tax=Alphaproteobac... 222 7e-57 UniRef50_C5NXB5 DNA repair protein RadC homolog n=1 Tax=Gemella ... 222 8e-57 UniRef50_Q7MVX9 UPF0758 protein PG_0894 n=24 Tax=Bacteroidales R... 222 9e-57 UniRef50_B5YDI9 DNA repair protein n=2 Tax=Dictyoglomus RepID=B5... 222 1e-56 UniRef50_C4ZA49 DNA repair protein RadC n=1 Tax=Eubacterium rect... 221 2e-56 UniRef50_C6BYC2 DNA repair protein RadC n=1 Tax=Desulfovibrio sa... 220 2e-56 UniRef50_C0Q9Z9 RadC3 n=1 Tax=Desulfobacterium autotrophicum HRM... 220 4e-56 UniRef50_A1UT15 DNA repair protein, RadC family n=3 Tax=Bartonel... 220 4e-56 UniRef50_Q1RK76 DNA repair protein RadC n=11 Tax=Rickettsia RepI... 220 4e-56 UniRef50_C0BG63 DNA repair protein RadC n=1 Tax=Flavobacteria ba... 219 5e-56 UniRef50_C4V569 DNA repair protein RadC n=2 Tax=Selenomonas RepI... 218 8e-56 UniRef50_B2V8J4 DNA repair protein RadC n=5 Tax=Aquificales RepI... 218 8e-56 UniRef50_C4FYP9 Putative uncharacterized protein n=1 Tax=Abiotro... 218 9e-56 UniRef50_A7HJG0 DNA repair protein RadC n=3 Tax=Thermotogaceae R... 218 1e-55 UniRef50_Q5WTW4 UPF0758 protein lpl2409 n=6 Tax=Legionella RepID... 218 1e-55 UniRef50_UPI0001BC32AB DNA repair protein RadC n=1 Tax=Butyrivib... 218 1e-55 UniRef50_C2BCF6 DNA repair protein RadC n=2 Tax=Anaerococcus Rep... 218 1e-55 UniRef50_C8VVH2 DNA repair protein RadC n=1 Tax=Desulfotomaculum... 218 2e-55 UniRef50_B2URH1 DNA repair protein RadC n=1 Tax=Akkermansia muci... 217 2e-55 UniRef50_Q0BRK0 DNA repair protein radC n=5 Tax=Alphaproteobacte... 217 2e-55 UniRef50_D2RM81 DNA repair protein RadC n=2 Tax=Acidaminococcus ... 217 3e-55 UniRef50_B5YL92 DNA repair protein RadC n=1 Tax=Thermodesulfovib... 216 4e-55 UniRef50_D1N9M0 DNA repair protein RadC n=1 Tax=Victivallis vade... 216 5e-55 UniRef50_O67541 UPF0758 protein aq_1610 n=2 Tax=Aquificaceae Rep... 216 5e-55 UniRef50_A2RLC4 UPF0758 protein llmg_1515 n=4 Tax=Lactococcus la... 216 6e-55 UniRef50_UPI000196B4AA hypothetical protein CATMIT_00107 n=1 Tax... 215 6e-55 UniRef50_B0S3Y4 UPF0758 protein FMG_0357 n=2 Tax=Finegoldia magn... 215 8e-55 UniRef50_C2MB02 DNA repair protein RadC n=1 Tax=Porphyromonas ue... 215 1e-54 UniRef50_C2KVW9 Possible DNA repair protein RadC n=1 Tax=Oribact... 214 2e-54 UniRef50_B9MPC4 DNA repair protein RadC n=2 Tax=Clostridia RepID... 214 2e-54 UniRef50_C0GMV6 DNA repair protein RadC n=1 Tax=Desulfonatronosp... 214 2e-54 UniRef50_C9LLN8 DNA repair protein RadC n=1 Tax=Dialister invisu... 213 3e-54 UniRef50_D1U9S4 DNA repair protein RadC n=1 Tax=Desulfovibrio ae... 213 3e-54 UniRef50_A4W1K3 UPF0758 protein SSU98_1084 n=76 Tax=Streptococcu... 212 6e-54 UniRef50_Q8DI83 UPF0758 protein tlr1707 n=31 Tax=Cyanobacteria R... 212 7e-54 UniRef50_C4XRP2 DNA repair protein RadC n=4 Tax=Desulfovibrional... 212 1e-53 UniRef50_D1W0Q6 Putative DNA repair protein RadC n=2 Tax=Prevote... 211 1e-53 UniRef50_A6Q5Q5 DNA repair protein RadC n=2 Tax=unclassified Eps... 211 1e-53 UniRef50_C7TC16 DNA repair protein n=8 Tax=Lactobacillus RepID=C... 211 2e-53 UniRef50_A8ZUS2 DNA repair protein RadC n=1 Tax=Desulfococcus ol... 210 3e-53 UniRef50_B2KEG6 DNA repair protein RadC n=1 Tax=Elusimicrobium m... 210 3e-53 UniRef50_B1YJT0 DNA repair protein RadC n=2 Tax=Exiguobacterium ... 209 5e-53 UniRef50_Q6AQC9 Related to DNA repair protein RadC n=4 Tax=Delta... 209 5e-53 UniRef50_C8NZ93 DNA repair protein RadC n=1 Tax=Erysipelothrix r... 209 5e-53 UniRef50_Q2G8R8 DNA repair protein RadC n=5 Tax=Sphingomonadales... 209 5e-53 UniRef50_A9BIK5 DNA repair protein RadC n=1 Tax=Petrotoga mobili... 209 6e-53 UniRef50_C3WLA1 DNA repair protein radC n=2 Tax=Fusobacterium Re... 209 7e-53 UniRef50_C0R2T1 DNA repair protein RadC n=7 Tax=Wolbachia RepID=... 208 9e-53 UniRef50_UPI0000E0FF1E DNA repair protein RadC n=1 Tax=Rhodobact... 206 4e-52 UniRef50_Q2GL92 DNA repair protein RadC n=12 Tax=Rickettsiales R... 206 4e-52 UniRef50_B0N2U6 Putative uncharacterized protein n=3 Tax=Bacteri... 206 4e-52 UniRef50_A5URD0 UPF0758 protein RoseRS_0767 n=7 Tax=Bacteria Rep... 205 8e-52 UniRef50_UPI0001BC61BD DNA repair protein radC n=3 Tax=Fusobacte... 205 1e-51 UniRef50_C5SK46 DNA repair protein RadC n=1 Tax=Asticcacaulis ex... 205 1e-51 UniRef50_C8N8A0 DNA repair protein RadC n=1 Tax=Cardiobacterium ... 204 2e-51 UniRef50_Q8UEZ6 UPF0758 protein Atu1607 n=100 Tax=Alphaproteobac... 204 2e-51 UniRef50_C6XNR3 DNA repair protein RadC n=1 Tax=Hirschia baltica... 204 2e-51 UniRef50_A5EYF9 Response regulator receiver domain protein-DNA r... 204 2e-51 UniRef50_A9NF52 DNA repair protein n=1 Tax=Acholeplasma laidlawi... 203 3e-51 UniRef50_Q0F0W4 DNA repair protein RadC n=1 Tax=Mariprofundus fe... 203 3e-51 UniRef50_Q8RF15 UPF0758 protein FN0909 n=11 Tax=Fusobacterium Re... 203 5e-51 UniRef50_B8FHA4 DNA repair protein RadC n=1 Tax=Desulfatibacillu... 203 5e-51 UniRef50_B9QT39 DNA repair protein RadC n=1 Tax=Labrenzia alexan... 202 1e-50 UniRef50_C1A4H3 DNA repair protein RadC n=1 Tax=Gemmatimonas aur... 202 1e-50 UniRef50_A0L491 DNA repair protein RadC n=4 Tax=Bacteria RepID=A... 200 3e-50 UniRef50_B0T9F0 DNA repair protein RadC n=1 Tax=Caulobacter sp. ... 200 3e-50 UniRef50_Q1DAY3 DNA repair protein RadC n=1 Tax=Myxococcus xanth... 200 4e-50 UniRef50_Q2IG79 DNA repair protein RadC n=8 Tax=Anaeromyxobacter... 199 4e-50 UniRef50_Q18B06 UPF0758 protein CD1144 n=8 Tax=Clostridiaceae Re... 199 5e-50 UniRef50_B8J197 DNA repair protein RadC n=4 Tax=Desulfovibrio Re... 199 6e-50 UniRef50_UPI00016C0069 DNA repair protein RadC n=1 Tax=Epulopisc... 199 7e-50 UniRef50_Q2FT43 UPF0758 protein Mhun_2739 n=5 Tax=Archaea RepID=... 198 1e-49 UniRef50_D1BNF1 DNA repair protein RadC n=3 Tax=Veillonella RepI... 198 1e-49 UniRef50_B1C9I2 Putative uncharacterized protein n=1 Tax=Anaerof... 196 5e-49 UniRef50_UPI00016B261F DNA repair protein RadC n=2 Tax=candidate... 196 5e-49 UniRef50_B1H050 DNA repair protein RadC n=1 Tax=uncultured Termi... 196 6e-49 UniRef50_A8ZTW3 DNA repair protein RadC n=5 Tax=Bacteria RepID=A... 194 1e-48 UniRef50_Q73P26 DNA repair protein RadC n=2 Tax=Treponema RepID=... 193 3e-48 UniRef50_B0T9R6 DNA repair protein RadC n=4 Tax=Alphaproteobacte... 192 6e-48 UniRef50_Q1MS20 DNA repair proteins n=3 Tax=Desulfovibrionaceae ... 191 2e-47 UniRef50_Q1WT78 DNA repair protein n=3 Tax=Lactobacillus RepID=Q... 189 5e-47 UniRef50_A5VEU8 DNA repair protein RadC n=4 Tax=Sphingomonadales... 187 2e-46 UniRef50_A7GTD5 DNA repair protein RadC n=3 Tax=Bacillaceae RepI... 186 4e-46 UniRef50_A0LNF4 DNA repair protein RadC n=1 Tax=Syntrophobacter ... 186 4e-46 UniRef50_C1SJ65 DNA repair protein radc n=1 Tax=Denitrovibrio ac... 186 4e-46 UniRef50_C4GB45 Putative uncharacterized protein n=1 Tax=Shuttle... 186 5e-46 UniRef50_C9RLS9 DNA repair protein RadC n=1 Tax=Fibrobacter succ... 186 6e-46 UniRef50_A6GHT1 DNA repair protein RadC n=1 Tax=Plesiocystis pac... 185 7e-46 UniRef50_Q7UL21 DNA repair protein n=4 Tax=Bacteria RepID=Q7UL21... 185 9e-46 UniRef50_B6AT60 DNA repair protein RadC n=1 Tax=Rhodobacterales ... 185 9e-46 UniRef50_B0PEI5 Putative uncharacterized protein n=1 Tax=Anaerot... 185 9e-46 UniRef50_A7VWV8 Putative uncharacterized protein n=1 Tax=Clostri... 185 1e-45 UniRef50_D2EK65 DNA repair protein n=1 Tax=Pediococcus acidilact... 185 1e-45 UniRef50_A2SPN1 DNA repair protein RadC n=1 Tax=Methanocorpuscul... 184 2e-45 UniRef50_Q5FNC4 DNA repair protein RadC n=1 Tax=Gluconobacter ox... 183 3e-45 UniRef50_D0LGP2 DNA repair protein RadC n=1 Tax=Haliangium ochra... 183 3e-45 UniRef50_A9GNT0 DNA repair protein n=1 Tax=Sorangium cellulosum ... 183 4e-45 UniRef50_A8S889 Putative uncharacterized protein n=1 Tax=Faecali... 183 5e-45 UniRef50_C7H3R5 Putative DNA repair protein RadC n=1 Tax=Faecali... 178 8e-44 UniRef50_C5V0A3 DNA repair protein RadC n=1 Tax=Gallionella ferr... 178 1e-43 UniRef50_D1PFM8 DNA repair protein RadC n=1 Tax=Prevotella copri... 178 1e-43 UniRef50_A6NZB7 Putative uncharacterized protein n=1 Tax=Bactero... 177 3e-43 UniRef50_Q2B8H5 Putative uncharacterized protein n=1 Tax=Bacillu... 175 7e-43 UniRef50_C7JGI7 DNA repair protein RadC n=8 Tax=Acetobacter past... 175 1e-42 UniRef50_C0EH16 Putative uncharacterized protein n=1 Tax=Clostri... 174 2e-42 UniRef50_C0R372 DNA repair protein RadC, putative n=11 Tax=Wolba... 174 2e-42 UniRef50_C7NDB9 DNA repair protein RadC n=4 Tax=Fusobacteriaceae... 174 2e-42 UniRef50_A4J365 DNA repair protein RadC n=1 Tax=Desulfotomaculum... 173 3e-42 UniRef50_D1PL34 DNA repair protein RadC n=1 Tax=Subdoligranulum ... 173 4e-42 UniRef50_C9BR87 DNA repair protein RadC n=4 Tax=Enterococcus fae... 173 4e-42 UniRef50_Q03EP2 DNA repair protein n=1 Tax=Pediococcus pentosace... 173 6e-42 UniRef50_B8H0Z9 DNA repair protein radC n=1 Tax=Caulobacter cres... 172 8e-42 UniRef50_C1QC41 DNA repair protein n=2 Tax=Brachyspira RepID=C1Q... 172 8e-42 UniRef50_C0R3D5 DNA repair protein RadC n=2 Tax=Wolbachia RepID=... 172 9e-42 UniRef50_B0MUL4 Putative uncharacterized protein n=1 Tax=Alistip... 171 1e-41 UniRef50_B6JJV2 DNA repair protein RadC n=5 Tax=Alphaproteobacte... 170 3e-41 UniRef50_A0Z2T6 DNA repair protein RadC n=1 Tax=marine gamma pro... 170 3e-41 UniRef50_C9M9H6 DNA repair protein RadC n=1 Tax=Jonquetella anth... 169 6e-41 UniRef50_A9AE97 DNA repair protein n=8 Tax=Bacteria RepID=A9AE97... 169 7e-41 UniRef50_Q2GEH3 DNA repair protein RadC n=2 Tax=Neorickettsia Re... 168 9e-41 UniRef50_C0GE80 DNA repair protein RadC n=1 Tax=Dethiobacter alk... 168 1e-40 UniRef50_B1ZYU3 DNA repair protein RadC n=3 Tax=Verrucomicrobia ... 166 4e-40 UniRef50_D1Y6L3 DNA repair protein RadC n=1 Tax=Pyramidobacter p... 166 5e-40 UniRef50_B0MNH0 Putative uncharacterized protein n=1 Tax=Eubacte... 166 5e-40 UniRef50_B4RG10 DNA repair protein RadC n=1 Tax=Phenylobacterium... 165 1e-39 UniRef50_D1AWS8 DNA repair protein RadC n=1 Tax=Streptobacillus ... 165 1e-39 UniRef50_A1K759 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=... 163 3e-39 UniRef50_Q2S8K4 DNA repair protein n=1 Tax=Hahella chejuensis KC... 162 9e-39 UniRef50_A9HJN5 DNA repair protein RadC n=1 Tax=Gluconacetobacte... 161 2e-38 UniRef50_Q03R16 DNA repair protein n=1 Tax=Lactobacillus brevis ... 160 3e-38 UniRef50_C1TLK8 DNA repair protein radc n=1 Tax=Dethiosulfovibri... 160 4e-38 UniRef50_B1I0K4 DNA repair protein radC-like protein n=1 Tax=Lys... 158 1e-37 UniRef50_P52140 UPF0758 protein yfjY n=148 Tax=Enterobacteriacea... 158 1e-37 UniRef50_C8U0Q3 Predicted DNA repair protein n=21 Tax=Enterobact... 158 2e-37 UniRef50_A6SWN0 DNA repair protein RadC n=14 Tax=Proteobacteria ... 156 4e-37 UniRef50_Q04U23 DNA repair protein n=4 Tax=Leptospira RepID=Q04U... 156 4e-37 UniRef50_Q9KR57 UPF0758 protein VC_1786 n=59 Tax=Proteobacteria ... 156 5e-37 UniRef50_A4SUN7 DNA repair protein n=2 Tax=Aeromonas salmonicida... 156 5e-37 UniRef50_Q0ACW7 DNA repair protein RadC n=2 Tax=Proteobacteria R... 156 7e-37 UniRef50_A7FEQ9 DNA repair protein, RadC family n=4 Tax=Yersinia... 155 1e-36 UniRef50_Q04B84 DNA repair protein n=2 Tax=Lactobacillus delbrue... 155 1e-36 UniRef50_B4X5D3 DNA repair protein RadC n=4 Tax=Alcanivorax sp. ... 155 1e-36 UniRef50_Q7VMM9 Conserved possible DNA repair protein n=1 Tax=Ha... 155 2e-36 UniRef50_Q9KUK8 UPF0758 protein VC_0510 n=11 Tax=Gammaproteobact... 154 2e-36 UniRef50_B4S9N8 DNA repair protein RadC n=1 Tax=Prosthecochloris... 154 2e-36 UniRef50_A8YUM9 DNA repair protein RadC n=9 Tax=Lactobacillus Re... 154 2e-36 UniRef50_Q7UT53 RadC n=1 Tax=Rhodopirellula baltica RepID=Q7UT53... 154 2e-36 UniRef50_B1IPT7 DNA repair protein RadC n=3 Tax=Enterobacteriace... 154 2e-36 UniRef50_Q47ZW8 DNA repair protein, RadC family protein n=20 Tax... 154 2e-36 UniRef50_C6J5M2 DNA repair protein RadC n=1 Tax=Paenibacillus sp... 154 2e-36 UniRef50_A8L178 DNA repair protein RadC n=3 Tax=Actinomycetales ... 154 2e-36 UniRef50_C5D8D2 DNA repair protein RadC n=4 Tax=Firmicutes RepID... 154 3e-36 UniRef50_B4Y2Y7 RadC n=1 Tax=Aquabacterium sp. PL1F5 RepID=B4Y2Y... 153 3e-36 UniRef50_B9ECC3 Putative uncharacterized protein n=1 Tax=Macroco... 153 4e-36 UniRef50_A0R7V6 DNA repair protein RadC n=5 Tax=Desulfuromonadal... 153 4e-36 UniRef50_B8KU95 DNA repair protein RadC n=1 Tax=gamma proteobact... 152 7e-36 UniRef50_B3HA66 DNA repair protein RadC n=3 Tax=Enterobacteriace... 152 7e-36 UniRef50_Q3BQ28 RadC family DNA repair protein n=5 Tax=Xanthomon... 152 8e-36 UniRef50_C4LDH2 DNA repair protein RadC n=2 Tax=Aeromonadaceae R... 152 8e-36 UniRef50_Q5E054 DNA repair protein RadC n=3 Tax=Gammaproteobacte... 151 1e-35 UniRef50_A1TJG0 DNA repair protein RadC n=1 Tax=Acidovorax citru... 151 2e-35 UniRef50_C6E4Z0 DNA repair protein RadC n=3 Tax=Geobacter RepID=... 151 2e-35 UniRef50_C6DAT0 DNA repair protein RadC n=5 Tax=Enterobacteriace... 151 2e-35 UniRef50_Q0AJV4 DNA repair protein RadC n=18 Tax=Proteobacteria ... 150 2e-35 UniRef50_C2E2B4 DNA repair protein RadC n=8 Tax=Lactobacillus je... 150 2e-35 UniRef50_Q8VR59 Putative intergenic-region protein n=24 Tax=Esch... 150 3e-35 UniRef50_C5SDF8 DNA repair protein RadC n=1 Tax=Allochromatium v... 150 3e-35 UniRef50_Q2SAN5 DNA repair protein n=2 Tax=Hahella chejuensis KC... 149 5e-35 UniRef50_Q3JDF2 DNA repair protein RadC n=4 Tax=Gammaproteobacte... 149 7e-35 UniRef50_B3TB70 Putative RadC, DNA repair protein n=1 Tax=uncult... 149 7e-35 UniRef50_B8KQ45 DNA repair protein RadC n=1 Tax=gamma proteobact... 148 9e-35 UniRef50_A9I305 DNA repair protein radC homolog n=3 Tax=Proteoba... 148 1e-34 UniRef50_Q042N7 DNA repair protein n=7 Tax=Lactobacillus RepID=Q... 148 1e-34 UniRef50_C4SWK5 DNA repair protein n=1 Tax=Yersinia intermedia A... 148 2e-34 Sequences not found previously or not previously below threshold: >UniRef50_B5EXE3 UPF0758 protein yicR n=116 Tax=Enterobacteriaceae RepID=YICR_SALA4 Length = 221 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 180/217 (82%), Positives = 206/217 (94%) Query: 6 QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQ 65 L+PREKML+ GI++L+DVELLALFLRTGT GKDV+TLAKE+L++FGSLYGLL++++ Q Sbjct: 5 DELLPREKMLRSGIASLSDVELLALFLRTGTPGKDVMTLAKEILQHFGSLYGLLSADFAQ 64 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMV 125 F GV+GIG+AKFAQLKGIAELARRYY+VRM EES LLSPEMTREFLQSQLTGEEREIF+V Sbjct: 65 FRGVNGIGLAKFAQLKGIAELARRYYSVRMNEESALLSPEMTREFLQSQLTGEEREIFLV 124 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 IFLD+QHRV+ H RLFSGTLNHVEVHPREI+REAIK+NASA+ILAHNHPSGCAEPSKADK Sbjct: 125 IFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADK 184 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 LITER+IK CQFMD+RVLDH++IGRGEYVSFAERGWI Sbjct: 185 LITERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 221 >UniRef50_A4W511 UPF0758 protein Ent638_0101 n=3 Tax=Enterobacteriaceae RepID=Y101_ENT38 Length = 221 Score = 257 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 160/220 (72%), Positives = 194/220 (88%) Query: 3 NNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSE 62 ++ L+PREKML FGI++LTD ELLALFLRTGT GK V LA+E+L++FGSL+GLL + Sbjct: 2 DDELTLLPREKMLSFGITSLTDAELLALFLRTGTSGKSVFVLAQELLQHFGSLHGLLNAN 61 Query: 63 YEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREI 122 ++F V GIG+AK+AQLKGIAELARRY++VR+ ++PLLSPEMT++FLQSQL+ ERE+ Sbjct: 62 LDEFRYVEGIGLAKYAQLKGIAELARRYHSVRVLGDNPLLSPEMTKDFLQSQLSDAEREV 121 Query: 123 FMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSK 182 FMVIFLD+QHRV+ H R+FSGTL HVEVHPREI+REAIK+NA+A+ILAHNHPSGCAEPSK Sbjct: 122 FMVIFLDNQHRVVKHSRMFSGTLRHVEVHPREIVREAIKVNAAAVILAHNHPSGCAEPSK 181 Query: 183 ADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ADK ITERIIK CQFMD+ VLDH +IGRGEYVSFAE+GWI Sbjct: 182 ADKDITERIIKCCQFMDIHVLDHFIIGRGEYVSFAEQGWI 221 >UniRef50_B2UAP0 UPF0758 protein Rpic_2712 n=3 Tax=Burkholderiaceae RepID=Y2712_RALPJ Length = 224 Score = 255 bits (651), Expect = 9e-67, Method: Composition-based stats. Identities = 90/222 (40%), Positives = 136/222 (61%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 + + PREK+L G +AL+D ELLA+FLR G GK + LA+E+L +FGSL L Sbjct: 3 IVDWPAHERPREKLLAHGPAALSDAELLAIFLRVGVPGKSAVDLARELLAHFGSLARLCH 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + ++FS ++G+G AK+AQL + E+ARR + S + ++FL+ L Sbjct: 63 ASQQEFSSINGMGPAKYAQLHALLEVARRALKEDFTQGQTFESAQSVKDFLRLTLGHRPH 122 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E+F FLD +HR+I LF GTL V+PREI + A+ NA+A+ILAHNHP+G EP Sbjct: 123 EVFACFFLDVRHRLIAWEELFRGTLTEARVYPREIAKRALHHNAAAVILAHNHPTGNTEP 182 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S++D ++T + ++ +D+ VLDH+++GR F E G + Sbjct: 183 SESDVILTRELCRALAMLDVIVLDHMIVGRNHVYGFLEHGKM 224 >UniRef50_A7MQ95 UPF0758 protein ESA_04094 n=32 Tax=Bacteria RepID=Y4094_ENTS8 Length = 230 Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 142/213 (66%), Positives = 183/213 (85%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PREK++++G + L+D ELLA+FLRTGT G DV+TLAK +L +FGSLYGLL+++ F + Sbjct: 18 PREKLMRYGAADLSDEELLAIFLRTGTPGMDVMTLAKRLLAHFGSLYGLLSADIRPFRDI 77 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+G+AK+AQLK I ELARRYY R EE+ LLSP +TR+FL+SQL +ERE+F+VIFLD Sbjct: 78 GGVGMAKYAQLKAIGELARRYYRSRPCEETALLSPTITRDFLESQLAEQEREVFLVIFLD 137 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 SQ+R+I LF+GTL+HVEVHPREI+REA+++NA+ +ILAHNHPSG AEPS+ADK++TE Sbjct: 138 SQNRIIRQNTLFTGTLSHVEVHPREIVREAVRLNAAGIILAHNHPSGRAEPSRADKMVTE 197 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 RI+KSCQ +D+RVLDH+VIGRGEYVSFAERGWI Sbjct: 198 RIVKSCQLVDIRVLDHLVIGRGEYVSFAERGWI 230 >UniRef50_B2FJW1 UPF0758 protein Smlt0399 n=129 Tax=Proteobacteria RepID=Y399_STRMK Length = 234 Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 92/223 (41%), Positives = 139/223 (62%), Gaps = 1/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 + + + PREK++ G +AL+D ELLALFL +G G+D + A+++L+ G L LL Sbjct: 3 IHDWPEQERPREKLIARGPTALSDAELLALFLGSGFGGRDAVQTARDLLQAHGPLRVLLD 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPL-LSPEMTREFLQSQLTGEE 119 + + + G+G A+ L ELA RY + + +P +LQ +L G+ Sbjct: 63 RPAAELARLPGLGPARSCTLAAGLELAHRYLAAELEHGEAVGNNPAAVGRYLQHRLRGQA 122 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 RE+FM +FLD++HR+I LF GT+N V+PRE++R A+ NA+A+IL+HNHPSG E Sbjct: 123 REVFMALFLDNRHRLIACEELFHGTINAAPVYPREVVRRALLHNAAAVILSHNHPSGDPE 182 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS AD IT+ + ++ +D+R+LDH V+G G VSFAERG + Sbjct: 183 PSSADTRITDELQQALAMVDVRLLDHFVVGEGRPVSFAERGLL 225 >UniRef50_B0UUW7 UPF0758 protein HSM_0009 n=10 Tax=Pasteurellaceae RepID=Y009_HAES2 Length = 222 Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 106/222 (47%), Positives = 155/222 (69%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 M + LMPREK+LK+G S+L D ELLA+FLRTG + V+ L++ +L +F SL GL+ Sbjct: 1 MTQQNTTLMPREKLLKYGASSLDDKELLAIFLRTGIKNCPVMQLSELVLAHFSSLRGLIN 60 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 ++ + F + G+G+ +F QL+ E+ +RY ++ SP+ R +LQ++L ++R Sbjct: 61 ADQKHFCQMKGLGITQFVQLQACTEMTKRYLLQELQFAQEFTSPDTVRMYLQTELENKDR 120 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 EIFMV+FLD+QHR+I +F GT+N V+PREII+ A+ NA+ALILAHNHPSG + P Sbjct: 121 EIFMVLFLDNQHRLIKKEEMFLGTINQANVYPREIIKTALFCNAAALILAHNHPSGVSTP 180 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S AD+ +TE I + + M++RVLDH +IG+G Y SFAE+GWI Sbjct: 181 SMADRKMTENIKQLSELMEIRVLDHFIIGKGNYFSFAEQGWI 222 >UniRef50_B5YIR9 DNA repair protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR9_THEYD Length = 224 Score = 252 bits (644), Expect = 7e-66, Method: Composition-based stats. Identities = 84/220 (38%), Positives = 139/220 (63%), Gaps = 1/220 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 ++ + PRE+++K G AL+D +LLA+ LRTG+ GK V+ A E+L+NF L GL Sbjct: 4 VREWPETERPRERLIKHGAEALSDAQLLAIVLRTGSNGKTVIDTAIELLQNFRGLRGLEE 63 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + G+G+AK AQ+K EL +R + +E+ S E+ + +L G ++ Sbjct: 64 ASISELKSFKGLGIAKIAQIKASFELGKRALCEKSQEQF-FNSAEIVYNYFFPKLNGLKK 122 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E+F+ + LD++ R+I ++ GTLN +HPRE+ ++A+K +A A+IL HNHPSG P Sbjct: 123 EVFITLLLDTKLRLIREVKVSEGTLNQSLIHPREVFKDAVKESAYAVILIHNHPSGDPTP 182 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 S+ D IT+++ K+ + +++ +LDH++IG G+Y S ERG Sbjct: 183 SEQDIEITKKLKKASEILEIPILDHVIIGSGKYFSMKERG 222 >UniRef50_Q46XP0 UPF0758 protein Reut_A2732 n=12 Tax=Proteobacteria RepID=Y2732_RALEJ Length = 228 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 91/222 (40%), Positives = 138/222 (62%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 + N PREK+ + G +AL+D ELLA+FLR G GK + LA++++ FGSL L T Sbjct: 3 ITNWPACERPREKLQECGAAALSDAELLAVFLRVGATGKSAVELARDLMVRFGSLTRLFT 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 ++ G+ G+G AK+ QL+ + ELARR + S L SP R +L+ L + Sbjct: 63 ADARAVLGIRGMGEAKYTQLQAVPELARRMLAESLELPSGLDSPAAVRSYLRLTLAPLAQ 122 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E+F+ +FLD+++R+I LF GTLN V+PRE+ R A+ NA+++I+AHNHPSGC P Sbjct: 123 EVFVCLFLDTRNRMIASEELFRGTLNQTAVYPREVARRALAHNAASVIVAHNHPSGCCTP 182 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S++D +T + ++ +D+R+LDH V+ SFAE G + Sbjct: 183 SQSDLQMTRMLARALDLIDVRLLDHFVVAGTHVHSFAEHGEL 224 >UniRef50_D1JB12 Probable DNA repair protein radC homolog n=2 Tax=uncultured archaeon RepID=D1JB12_9ARCH Length = 330 Score = 249 bits (637), Expect = 4e-65, Method: Composition-based stats. Identities = 90/222 (40%), Positives = 134/222 (60%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K + PREK+L +G S LT ELLA+FLR+G GK + +A ++L FG + G+ Sbjct: 90 LKRLRKEERPREKLLTYGSSKLTTSELLAIFLRSGIPGKSAIVIANDLLTQFGGVKGIFE 149 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 ++ + + G+G AK AQ+K + LA Y M+ S + + + ++L + + Sbjct: 150 ADKAKLMDIEGVGAAKVAQIKAVQALAEEYLKESMKSVSKVRNSKEVFDYLYLTMRDLKI 209 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 EIF VIFLDS ++ I LF GTLN V+PREI++ A+ NA++LI HNHPSG P Sbjct: 210 EIFKVIFLDSANQTIDDENLFEGTLNASSVYPREIVKSAVNKNAASLIFVHNHPSGDPTP 269 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S +D+ ITE +I +C + + VLDHI+IG Y SFA+ G + Sbjct: 270 SGSDRAITEDLIYACNLVQITVLDHIIIGDNVYFSFADEGLL 311 >UniRef50_B3E339 UPF0758 protein Glov_0523 n=8 Tax=Desulfuromonadales RepID=Y523_GEOLS Length = 230 Score = 248 bits (635), Expect = 8e-65, Method: Composition-based stats. Identities = 85/225 (37%), Positives = 131/225 (58%), Gaps = 3/225 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTG--TRGKDVLTLAKEMLENFGS-LYG 57 +K+ + PREK+LK G +AL+D ELLAL LRTG GK + L +E+LE F L Sbjct: 6 IKDWPEDERPREKLLKRGAAALSDAELLALVLRTGDAAAGKSAIDLGRELLERFDGNLRE 65 Query: 58 LLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTG 117 L +E + + G+G+AK A +K L +R+ R+ SP +F +L Sbjct: 66 LAQAELNELQQIKGLGLAKAASIKAAFTLGKRFQARRLETLERFTSPAQVFDFFHHELRD 125 Query: 118 EEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGC 177 +E+F+ + LD ++R+ ++ G+LN VHPRE+ A++ +A+A+I HNHPSG Sbjct: 126 NRKELFLTLLLDGKNRITRKVQVSEGSLNQSIVHPREVFAPAVRESAAAVIFIHNHPSGD 185 Query: 178 AEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS+ D IT R+ ++ + + ++VLDHI+IG G Y SF E G + Sbjct: 186 PAPSREDHEITRRLNEAGEILGIKVLDHIIIGDGAYFSFVESGLL 230 >UniRef50_A1SR15 UPF0758 protein Ping_0056 n=2 Tax=Gammaproteobacteria RepID=Y056_PSYIN Length = 225 Score = 248 bits (635), Expect = 8e-65, Method: Composition-based stats. Identities = 97/222 (43%), Positives = 145/222 (65%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K+ PREK+L+ G +AL+D ELLA+FLRTG RG DV+TL+K++L FGSL+ L Sbjct: 4 LKDWPNQERPREKLLQKGTAALSDAELLAIFLRTGCRGVDVVTLSKQLLSQFGSLHALFA 63 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + F G+G AK+ QL+ + E++ RY + + + L S T+ FL +++ Sbjct: 64 ASESDFCEKKGLGQAKYVQLQAVLEMSSRYLQEPLSKGNALTSAAQTKAFLIAKMHNLPY 123 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E+F I LD+QHR+I F G+++ VHPR I ++ + NA+A+IL HNHPSG Sbjct: 124 EVFAAILLDTQHRIIRFHEFFFGSIDCATVHPRIIAQKVLSENAAAIILVHNHPSGDPSA 183 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S+ADK+IT++I+ + Q +D+RVLDH+V+G + SFAE GWI Sbjct: 184 SEADKMITQKIVSALQLIDVRVLDHLVVGHKKCTSFAENGWI 225 >UniRef50_Q3A8G4 UPF0758 protein Pcar_0065 n=2 Tax=Bacteria RepID=Y065_PELCD Length = 227 Score = 248 bits (634), Expect = 9e-65, Method: Composition-based stats. Identities = 81/224 (36%), Positives = 129/224 (57%), Gaps = 2/224 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTG--TRGKDVLTLAKEMLENFGSLYGL 58 +K+ + PREK+L G AL+D ELLAL LR+G G L + +++ F +L + Sbjct: 4 IKDWPEDERPREKLLHRGAEALSDAELLALILRSGDAASGHSALDQGRLLIQQFDTLRQM 63 Query: 59 LTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGE 118 T+ + + GIG AK A+L+ + ELARR+ +R SP+ +L Sbjct: 64 ATATTSELQAIKGIGPAKAAELQAVFELARRFGRNPLRPGDRYTSPQAVFAHFHERLRDH 123 Query: 119 EREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCA 178 +RE F+ + LDS++R++ + G+L VHPR++ ++ +A+A++ HNHPSG Sbjct: 124 KRERFIALLLDSKNRLLREVGISEGSLTASIVHPRDVFAPVVRESAAAVLFVHNHPSGDP 183 Query: 179 EPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS+ D IT+R+ + + M +RVLDHI+IG YVS A+RG + Sbjct: 184 SPSREDLDITQRLREVGELMGVRVLDHIIIGDEGYVSLADRGVL 227 >UniRef50_A9VIS8 UPF0758 protein BcerKBAB4_4299 n=107 Tax=Firmicutes RepID=Y4299_BACWK Length = 225 Score = 248 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 78/222 (35%), Positives = 139/222 (62%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +++ + PRE++L G +L++ ELLA+ LRTG++ + VLTL+ +L +F L L Sbjct: 4 IRDVVREEQPRERLLLEGAGSLSNRELLAVLLRTGSKEETVLTLSDNILHHFDGLRMLKD 63 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + E+ +HG+G+AK +QL EL RR + + + SPE ++ ++ ++ Sbjct: 64 ATLEEMMSIHGVGIAKASQLMAAFELGRRMVRLEYQNRYSIRSPEDCASYMMEEMRFLQQ 123 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+ ++L+++++VI + +F G+LN VHPRE+ +EA + A+++I HNHPSG P Sbjct: 124 EHFVCLYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPAP 183 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S+ D +T+R+++ + + + VLDHI+IG ++VS E+G I Sbjct: 184 SREDIEVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225 >UniRef50_Q31EB6 UPF0758 protein Tcr_1917 n=5 Tax=Gammaproteobacteria RepID=Y1917_THICR Length = 225 Score = 247 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 89/223 (39%), Positives = 143/223 (64%), Gaps = 1/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 + + + PREK+LKFG L+D ELLA+FLR G +GK + LA+++L++FGSL LL Sbjct: 3 ITDWHENDRPREKLLKFGAPHLSDAELLAIFLRVGVKGKSAVELAQDLLDHFGSLERLLN 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 ++ F G+G AK+ QLK + E++RR++ +++ L PE LQ + + R Sbjct: 63 ADEAAFCEAKGLGQAKYVQLKAVLEMSRRHFESGLKKGEALTQPEKVARLLQHHIGHQSR 122 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 EIF ++ LD Q++ I LF+GT+N VH RE+++ + +A+A+ILAHNHPSG P Sbjct: 123 EIFGLVLLDQQNQFIQFVPLFTGTINQATVHIREVLKTVLDHHAAAVILAHNHPSGDPTP 182 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGR-GEYVSFAERGWI 222 S++D+ +T +I + Q ++ R LDHI++G G + SF ++G + Sbjct: 183 SQSDRDLTHQIQQGLQLIETRCLDHIILGDHGRWYSFTQQGIL 225 >UniRef50_Q1AVT6 UPF0758 protein Rxyl_1530 n=3 Tax=Bacteria RepID=Y1530_RUBXD Length = 227 Score = 247 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 80/222 (36%), Positives = 126/222 (56%), Gaps = 1/222 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K L PRE++L G SAL+D ELL + G+R K + LA +++ G L+ L Sbjct: 7 IKQLPPELRPRERLLAGGASALSDAELLGVLFGIGSREKTAVELAGDVISGAGGLHNLFG 66 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + V GIG AK L ELARR R + SP L+ ++ +R Sbjct: 67 ASVHELKQVKGIGEAKACILLAALELARRLSVARNPGRPVISSPADVDGLLRGRIANLDR 126 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+V+ L++++ VI + GTL+ VHPRE+ + AI+ +A++++LAHNHPSG EP Sbjct: 127 EHFVVVLLNTKNEVIEAPTISVGTLSSSLVHPREVFKPAIRASAASVVLAHNHPSGRVEP 186 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S+ D+ +T R+ ++ + + VLDH+++G G Y S E G + Sbjct: 187 SREDREVTGRVAEAGGIIGIEVLDHVIVGEG-YFSMKEHGML 227 >UniRef50_B2A699 DNA repair protein RadC n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A699_NATTJ Length = 241 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 75/222 (33%), Positives = 123/222 (55%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K+ + PRE+ LK G A++D EL+A+ L TGT+ L LA +L N+ S++ LL Sbjct: 20 IKSLPEADRPRERFLKLGPEAISDSELIAIILGTGTKQSSALDLANSILSNYVSIFNLLQ 79 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + + GIG AK +LK ELA R + SPE + +L E R Sbjct: 80 ATISELCEIPGIGYAKSIKLKAAFELANRCMAREQLTMDKITSPEDIFRLMNFRLKTETR 139 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+ + L+++ ++ + G+LN VHPRE+ AI+ +A +IL HNHPSG EP Sbjct: 140 EHFLAVMLNTKSYLLKIDLISIGSLNATIVHPREVFNRAIRASACGVILVHNHPSGDPEP 199 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S+ D +T R++ + + + ++DH++IG ++ SF+ + Sbjct: 200 SQDDIKLTNRLVAAGDLLGIPIMDHVIIGHQKFYSFSRENHL 241 >UniRef50_A6TQH8 UPF0758 protein Amet_2289 n=54 Tax=cellular organisms RepID=Y2289_ALKMQ Length = 232 Score = 246 bits (628), Expect = 5e-64, Method: Composition-based stats. Identities = 77/223 (34%), Positives = 122/223 (54%), Gaps = 1/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLE-NFGSLYGLL 59 +K PREK+L +G +L++ ELLA+ L TGT+ + LA +L + L L Sbjct: 10 IKKMPINERPREKLLNYGPESLSNPELLAIILSTGTKEMSAIDLATHVLSYSEEGLRHLK 69 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 E E+ + G+G+AK +Q+ EL +R + SP+ L ++ + Sbjct: 70 NCEIEELQQIKGVGIAKASQILAAVELGKRISLTSRVNHYRIKSPDDVSNLLMEEMRYLK 129 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 +E F + L+++H VI + G+LN VHPRE+ AIK ++SA+IL HNHPSG Sbjct: 130 KEYFNIALLNTKHEVIAIENISIGSLNASIVHPREVFVVAIKRSSSAIILVHNHPSGDPS 189 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS D IT+R++++ + + + VLDHI+IG Y S E+ + Sbjct: 190 PSGEDIRITKRLVEAGKLLGIEVLDHIIIGDNVYYSLKEKSMM 232 >UniRef50_A5UDB6 UPF0758 protein CGSHiEE_07200 n=30 Tax=Gammaproteobacteria RepID=Y7200_HAEIE Length = 221 Score = 246 bits (628), Expect = 5e-64, Method: Composition-based stats. Identities = 109/220 (49%), Positives = 156/220 (70%) Query: 3 NNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSE 62 N+ LMPREK+L G AL+D ELLA+FLRTG +G V++L+K +L +FGSL+ LL+S+ Sbjct: 2 ENNDDLMPREKLLASGAKALSDYELLAIFLRTGIKGCPVISLSKNVLTHFGSLHALLSSD 61 Query: 63 YEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREI 122 + F V G+G+ +F QL+ I E+ +RY M + PE + FL ++L EERE+ Sbjct: 62 KKAFCSVKGLGITQFIQLQAITEMTKRYLKQEMLSTPIINDPETVKLFLLTELQHEEREV 121 Query: 123 FMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSK 182 FMV+FLD+QHR+I RLF GT+N V+PREII+EA+ NA+ALILAHNHPSG EPS Sbjct: 122 FMVLFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGVTEPSY 181 Query: 183 ADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +D+LIT++I + + M++ VLDH+++G+ + SFAE + Sbjct: 182 SDQLITKKIQDAAELMEICVLDHLIVGKSDCYSFAENCLL 221 >UniRef50_C9L5T8 DNA repair protein RadC n=4 Tax=Clostridiales RepID=C9L5T8_RUMHA Length = 231 Score = 244 bits (624), Expect = 1e-63, Method: Composition-based stats. Identities = 78/224 (34%), Positives = 125/224 (55%), Gaps = 3/224 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLE---NFGSLYG 57 + + P EK L+ G LTD ELLA+ LRTGT+G + +A+E+L+ + L G Sbjct: 7 INQMPEEDRPYEKCLRMGAECLTDSELLAVLLRTGTKGSPSVEMAEEVLKLSKDKEGLLG 66 Query: 58 LLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTG 117 L Q V GIG K Q+K I EL++R ++ P ++ QL Sbjct: 67 LHQLSLAQLQAVKGIGKVKAIQIKCIGELSKRIATATAKKGLSFRHPASIADYYMEQLRH 126 Query: 118 EEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGC 177 EE+E+ + + LD+++ ++ +F GT+N +PREI A+ +A ++L HNHPSG Sbjct: 127 EEQELLICMMLDTKNHLLGDEMIFKGTVNSSLANPREIFLSAVSYHAVGILLVHNHPSGD 186 Query: 178 AEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 PS+AD T+R+ ++ + + + +LDHI+IG +Y+SF E+G Sbjct: 187 CTPSQADVDFTQRVKEAGELLGIPLLDHIIIGDCKYLSFREQGI 230 >UniRef50_Q21TE2 UPF0758 protein Rfer_3252 n=12 Tax=cellular organisms RepID=Y3252_RHOFD Length = 234 Score = 243 bits (621), Expect = 3e-63, Method: Composition-based stats. Identities = 92/232 (39%), Positives = 145/232 (62%), Gaps = 10/232 (4%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLE---------- 50 +K+ PREK+L G AL+DVELLA+ LRTG +GK VL +A+E+LE Sbjct: 3 LKDLPPDARPREKLLARGPGALSDVELLAVLLRTGIKGKGVLQMARELLELKKSGSDDND 62 Query: 51 NFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREF 110 F + GLL + + + G+G AK A+L + EL+RR +++E + +P+ + + Sbjct: 63 GFDGIAGLLHATSDDLKRIKGLGPAKRAELVAVLELSRRALAQQLKERTIFATPDAVKHY 122 Query: 111 LQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILA 170 LQ L + E+F V+FLD Q+R++ LF GTL V+PRE++ A+ AS+++LA Sbjct: 123 LQLHLAAKPHEVFAVLFLDVQNRLLALEELFRGTLTQTSVYPREVVLRALHHQASSVVLA 182 Query: 171 HNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 HNHPSG +PS+AD+++T+ + + +D+RVLDH+++ GE +S AERG + Sbjct: 183 HNHPSGTVQPSRADEMLTQTLKTTLALIDVRVLDHVIVAPGEALSMAERGLL 234 >UniRef50_Q46A65 UPF0758 protein Mbar_A2303 n=2 Tax=Methanosarcinaceae RepID=Y2303_METBF Length = 229 Score = 243 bits (620), Expect = 4e-63, Method: Composition-based stats. Identities = 68/222 (30%), Positives = 136/222 (61%), Gaps = 1/222 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +++ + PRE++++ G +L++ ELL + LRTG+ ++V++L+ + + S+ L Sbjct: 8 IQDIPEEERPRERLIRNGPESLSNSELLGVILRTGSNKENVVSLSSRIFSEY-SIKQLSL 66 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + VHG+G AK AQ+ + ELARR + + SP+ + ++ +++ Sbjct: 67 ANVSRLMKVHGVGKAKAAQIAAVFELARRLETFVEEPKRKVCSPKDVYTLMYPKMREQKK 126 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+ + LD++++++ + G+LN VHPRE+ + A+ +++++I+ HNHPSG P Sbjct: 127 EKFITLCLDTKNQILKEEVVSIGSLNASIVHPREVFKSALMESSASVIMIHNHPSGDPSP 186 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S+ D ++TE++++ + + + VLDHI+IG G YVS + G++ Sbjct: 187 SREDIMVTEKMVEGGKLLGIDVLDHIIIGEGRYVSLKDEGFV 228 >UniRef50_D0MFA0 DNA repair protein RadC n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MFA0_RHOM4 Length = 245 Score = 242 bits (619), Expect = 5e-63, Method: Composition-based stats. Identities = 74/226 (32%), Positives = 118/226 (52%), Gaps = 4/226 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGK----DVLTLAKEMLENFGSLY 56 + + PREK+++ G SAL+D EL+AL +GTR K + L + ++ +GSLY Sbjct: 19 INQWDEADRPREKLMRRGPSALSDAELIALIFGSGTRTKQGSISAVQLGQALIRAYGSLY 78 Query: 57 GLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLT 116 L + ++ + V G+G AK QL E+ RR R + +P L Sbjct: 79 ALAQRDLKELTRVAGVGPAKAVQLVAAFEIGRRVEAQRPGRRIQVRTPADVAACYGPLLR 138 Query: 117 GEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSG 176 +RE+F ++ L++ + +I + G L V PR + + AI NA+ +I HNHPSG Sbjct: 139 DLKREVFKIVLLNTANYIIADYTISEGGLAASIVEPRAVFQRAILDNAAGIICLHNHPSG 198 Query: 177 CAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 EPS D IT +++++ + + + V DHI+I Y S AERG + Sbjct: 199 NPEPSAEDIRITRQLVEAGRLLGIPVHDHIIIAGTTYTSLAERGLM 244 >UniRef50_Q4UPP0 UPF0758 protein XC_3944 n=35 Tax=Proteobacteria RepID=Y3944_XANC8 Length = 225 Score = 242 bits (619), Expect = 5e-63, Method: Composition-based stats. Identities = 86/222 (38%), Positives = 134/222 (60%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 + + PREK+L G + L+D ELLA+F+ +G RG+D + A+++L G L LL Sbjct: 3 INDWPTDERPREKLLARGAAVLSDAELLAIFVGSGLRGQDAVRTARDLLHRHGPLRCLLD 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + + G+G A +L ELA R+ + L P + +L Sbjct: 63 RPAKALARLPGLGPASACKLSAALELANRHLLSDLERGEALSDPSSVGRYFSQRLRARNY 122 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E+F +FLDS+HR I LF+GT++ E+HPRE++R A+ NA+A+++ HNHPSG EP Sbjct: 123 EVFAALFLDSRHRAIAFEELFTGTIDAAEIHPREVVRRALLHNAAAVVVGHNHPSGNPEP 182 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S+AD+ +T+R++++ +D+R+LDH VIG G VS AERGW+ Sbjct: 183 SEADRAVTQRLLQALGLVDIRLLDHFVIGDGRPVSLAERGWV 224 >UniRef50_C6LCB9 DNA repair protein RadC n=3 Tax=Clostridiales RepID=C6LCB9_9FIRM Length = 231 Score = 242 bits (619), Expect = 6e-63, Method: Composition-based stats. Identities = 75/225 (33%), Positives = 119/225 (52%), Gaps = 3/225 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEML---ENFGSLYG 57 MK P EK LK G L+D ELLA+ LRTG +G + LA+E+L + L G Sbjct: 6 MKQLPDDERPYEKCLKCGAGVLSDAELLAVILRTGAKGMTSVELAREILSFPKPQPGLSG 65 Query: 58 LLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTG 117 L + G+G K Q++ I EL+RR E + S + ++ Sbjct: 66 LYHLSASALCDIKGVGKVKAVQIQCITELSRRIAKSVASEGNTFTSAQAIADYYMEDFRH 125 Query: 118 EEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGC 177 ++E ++ D++ +++ + + GT+N V PREI EA+ A +IL HNHPSG Sbjct: 126 LQQERVFLLSFDTKGELLSEKTISVGTVNQSCVSPREIFLEALSCRAVYVILLHNHPSGN 185 Query: 178 AEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +PS D+L+T R+ +S + +++ ++DHI++G Y SF E G+I Sbjct: 186 PQPSPEDRLLTMRVHESGKLLEIPLMDHIILGDRRYFSFREEGFI 230 >UniRef50_C9Y8Q3 DNA repair protein radC homolog n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8Q3_9BURK Length = 239 Score = 241 bits (615), Expect = 1e-62, Method: Composition-based stats. Identities = 94/237 (39%), Positives = 142/237 (59%), Gaps = 15/237 (6%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLE---------- 50 +K+ PREK+L G AL+D ELLA+ LRTG GK VL +A+E+L+ Sbjct: 3 LKDLPLEAQPREKLLARGAGALSDAELLAILLRTGIAGKGVLQMAEELLQLKNDSASRTV 62 Query: 51 -----NFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPE 105 FG + GLL + + V G+G AK A++ + ELARR R++E P+ Sbjct: 63 DGRQGGFGGIAGLLHATADDLKHVKGLGPAKRAEIVAVLELARRAMAQRLQEREVFADPQ 122 Query: 106 MTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINAS 165 + +LQ L + E+F V+FLDSQ++++ LF GTL V+PRE++ A+ A+ Sbjct: 123 AVKHYLQLHLAAKGHEVFAVLFLDSQNKLLAMEELFRGTLTQTSVYPREVVIRALHHGAA 182 Query: 166 ALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 A++LAHNHPSG +PS+AD+ +T+ + + +D+RVLDHI++G G+ +S AE G I Sbjct: 183 AVVLAHNHPSGSVQPSRADEALTQTLKAALALVDVRVLDHIIVGPGQALSMAETGLI 239 >UniRef50_C5TNC6 DNA repair protein RadC n=3 Tax=Neisseria RepID=C5TNC6_NEIFL Length = 224 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 78/222 (35%), Positives = 133/222 (59%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K + PREK+L G +AL+D ELLA+ LR GTRG + LA+ +L FGSL L++ Sbjct: 3 IKEWPEGERPREKLLAHGAAALSDAELLAILLRVGTRGMSAVDLARYLLSEFGSLGKLMS 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 ++ + + G+G+A + Q + E+ RR ++E+ L +P+ ++L+ L E+ Sbjct: 63 ADAKTLAAYKGMGLASYTQFAVVKEIGRRILGEDLQEQIILSNPKSVADYLRLHLGHEKI 122 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E+ + + L+ Q+++I R L GT+ V+ REI++ A+ A +LILAHNHP A P Sbjct: 123 EVSVALLLNRQNQLIAVRELSRGTVAENTVYIREIVKLALDEYADSLILAHNHPGSSARP 182 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S++D TER+ ++ +D+ +LDH ++ E S E+G++ Sbjct: 183 SESDVQFTERLKQALSLVDITLLDHFIVTAKETCSLREQGYM 224 >UniRef50_A8R890 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R890_9FIRM Length = 227 Score = 240 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 86/222 (38%), Positives = 134/222 (60%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K PREK L GI AL++ EL+AL LR GTR + VL LA E+L + SL L Sbjct: 3 VKEMQLHQRPREKALMHGIEALSNRELIALLLRNGTRSQSVLELADEVLNRYSSLGSLGQ 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + + GI AK +L+ L +R ++E + SP+ E+L Q+ +++ Sbjct: 63 ASLTELMEIDGIKQAKAIELQAAFALGKRIAFDVLKESEAISSPQKLSEWLMQQIGFQQQ 122 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+V+FL+ +++++ ++ LF GTL VHPREI +EA++I + +I AHNHPSG + Sbjct: 123 EHFLVVFLNQRNQILAYKTLFVGTLTSANVHPREIFKEAMRIGCAKIICAHNHPSGNPQV 182 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S AD IT++I++ Q + + +LDHIV+G YVS E G++ Sbjct: 183 SDADIAITQQIMECGQLVSIPLLDHIVVGGNRYVSLREEGYM 224 >UniRef50_B2V090 UPF0758 protein CLH_0547 n=18 Tax=Clostridium RepID=Y547_CLOBA Length = 229 Score = 239 bits (610), Expect = 6e-62, Method: Composition-based stats. Identities = 82/223 (36%), Positives = 139/223 (62%), Gaps = 1/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K+ + P+EK+L +G L + ELLA+ LRTGT+G++VL L+ +L F L G+L Sbjct: 7 IKDIPKNERPKEKLLSYGADTLNNSELLAIILRTGTKGENVLQLSNRLLSEFQGLDGILE 66 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVR-MREESPLLSPEMTREFLQSQLTGEE 119 + + + + GI K +Q+ +AEL RR+ + + ++SP + +++ + Sbjct: 67 ASLDDITSIKGIKEGKASQILALAELFRRFRTFKSADRDIKIMSPNDIAMLINGEMSLLK 126 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 +EI VIFL++++ VI + +F G+LN VHPREI +EA+ +++ +I+ HNHPSG Sbjct: 127 QEILKVIFLNTKNIVIGTKDVFKGSLNTSIVHPREIFKEAVNKSSTKIIICHNHPSGDPT 186 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PSK D IT RI + + M +++LDHI+IG+ ++S E+G+I Sbjct: 187 PSKEDINITLRIKECGEIMGIQLLDHIIIGKNGFISLKEKGFI 229 >UniRef50_A6QHJ5 UPF0758 protein NWMN_1555 n=52 Tax=Staphylococcus RepID=Y1555_STAAE Length = 228 Score = 238 bits (609), Expect = 7e-62, Method: Composition-based stats. Identities = 73/221 (33%), Positives = 117/221 (52%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K MPRE++L G +L++ ELLA+ + TG +G + ++ E+L++ +L L Sbjct: 3 IKEMVTSEMPRERLLSHGAKSLSNTELLAILINTGRKGFSSIDISNELLKSASNLNELKK 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 S V GIG+ K LK EL R + P +++ + + Sbjct: 63 SSINDLIKVKGIGLQKAITLKAAFELGERMGRRAENNRIKITQPSDVADYMIPTMKDLTQ 122 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+++ L+S++ VI +F GTLN VHPREI A++ NA+A+I HNHPSG P Sbjct: 123 EHFVILLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTP 182 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 S+ D + T R+ + + + +LDHI+IG + S E G+ Sbjct: 183 SQEDIITTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 223 >UniRef50_Q3AF80 UPF0758 protein CHY_0341 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Y341_CARHZ Length = 226 Score = 238 bits (607), Expect = 1e-61, Method: Composition-based stats. Identities = 82/221 (37%), Positives = 132/221 (59%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +KN + L PRE++L+ G +L ELLA+ L +GT ++ L LA +L FG L GL+ Sbjct: 5 IKNLPEELRPRERLLRHGPESLNPAELLAVLLGSGTPQENALELALRLLTTFGGLKGLIE 64 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 EQ GIG AK A+L ELARRYY + + L+P+ +L+ ++ +++ Sbjct: 65 VHPEQLKSFKGIGQAKAAKLLAALELARRYYELTGENKLNFLNPDDVYNYLRYKIGHKKQ 124 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E +V++L++++++ + G +NH V P +I REA+KI A A+I+AHNHPSG P Sbjct: 125 EQVVVLYLNTKNQLCGENIVAIGGVNHAGVSPGDIFREAVKIGAYAVIIAHNHPSGDPTP 184 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 SK D T R+ K+ + + +++LDHI++G +Y+S Sbjct: 185 SKEDIDFTGRVKKASEILGIKLLDHIILGENKYISMKAERL 225 >UniRef50_C7GE95 DNA repair protein RadC n=2 Tax=Roseburia RepID=C7GE95_9FIRM Length = 243 Score = 238 bits (607), Expect = 1e-61, Method: Composition-based stats. Identities = 76/223 (34%), Positives = 117/223 (52%), Gaps = 1/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLEN-FGSLYGLL 59 +K P EK L +G L+D ELLA+ +R+GT G + +A+ +L + +L L Sbjct: 19 VKELPDSEKPYEKFLTYGPEYLSDAELLAVIIRSGTSGLKSVEVAQNLLNDGHRNLLNLY 78 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 +E+ + GIG K QLK IAEL++R + + +P ++ L E Sbjct: 79 DIPFEKMQKIRGIGPIKAIQLKCIAELSKRIAQTKSAPNVCMTNPRTIADYYMEHLRHEN 138 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 +E +V D++ + + L G+ N V PRE+ AI +A+ LIL HNHPSG E Sbjct: 139 KEHLIVCMFDNKCHMKGDKLLSVGSANETIVSPREVFETAINCHAAHLILVHNHPSGIPE 198 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS AD ++T+RI+ Q M + + DH++IG Y S+ E I Sbjct: 199 PSHADDVVTKRILNCGQLMGIPLSDHVIIGDHSYFSYRENNRI 241 >UniRef50_A9IU27 UPF0758 protein Bpet3149 n=5 Tax=Bordetella RepID=Y3149_BORPD Length = 225 Score = 238 bits (607), Expect = 1e-61, Method: Composition-based stats. Identities = 83/220 (37%), Positives = 132/220 (60%) Query: 3 NNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSE 62 + PRE++L+ G ++L D ELLAL LRTGTRG+ + + ++L +G L GL + Sbjct: 6 DLPPHERPRERLLRHGPASLRDAELLALALRTGTRGRTAIDMGSQLLHRYGGLRGLFAAS 65 Query: 63 YEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREI 122 ++ + G+G AK L I ELARR R+ + + P + + ++ L E Sbjct: 66 PQELMSLPGLGAAKAGTLAAILELARRAAEERLMRQQAMSEPGSVKRYFKTALANCAVEH 125 Query: 123 FMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSK 182 + ++LDSQ +IT L GTL V+PRE++REA++ +A+ALILAHNHPSG A+PS+ Sbjct: 126 CLALYLDSQLNLITSGELARGTLARASVYPREVVREALRHHAAALILAHNHPSGSAQPSQ 185 Query: 183 ADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 AD+ T + ++ +++R+LDH+++ VS AE G + Sbjct: 186 ADRDFTRHMQQALALVEIRLLDHLIVAGDTVVSMAELGLL 225 >UniRef50_B4RM65 UPF0758 protein NGK_1225 n=25 Tax=Neisseriaceae RepID=Y1225_NEIG2 Length = 225 Score = 237 bits (606), Expect = 1e-61, Method: Composition-based stats. Identities = 79/222 (35%), Positives = 131/222 (59%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K + PREK+L+ G +AL+D ELLA+ LR GTRG + LA+ +L+ FGSL L++ Sbjct: 3 IKQWPEGERPREKLLERGAAALSDAELLAILLRVGTRGMSAVDLARYLLQEFGSLGRLMS 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 +E + S G+G A F Q + E+ RR ++EE L P+ ++L+ L E+ Sbjct: 63 AEVGKLSAYKGMGTASFTQFAVVREIGRRILEEELQEEITLSDPDTVADYLRFHLGQEKV 122 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E+ + + L+ Q+++I R L GT+ ++ REI++ A+ A +LI+AHNHP G EP Sbjct: 123 EVSVALLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEP 182 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S+ D + T R+ ++ +D+ +LDH ++ SF + G + Sbjct: 183 SQEDIMFTRRLAQAMSLVDVSLLDHFIVTSQTVRSFRQLGLM 224 >UniRef50_A5FMW5 UPF0758 protein Fjoh_0413 n=33 Tax=Bacteroidetes RepID=Y413_FLAJ1 Length = 229 Score = 237 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 69/221 (31%), Positives = 120/221 (54%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K+ S+ PREK++ G AL+D EL+A+ + +G+R + + L++ +L + +L L Sbjct: 8 IKDWSEDDKPREKLMLKGKEALSDAELMAILIGSGSRNESAVALSQRILASAKNLNSLWK 67 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 Q GIG AK + EL RR + + + S + +Q + Sbjct: 68 MSVSQLIKFKGIGEAKAVSIVAALELGRRQRAEDILKLKKITSSKDAFTIMQPIIGELPH 127 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F V+FL++ ++VI+ +L G + V R + + ++ A+ LIL HNHPSG P Sbjct: 128 EEFWVLFLNNSNKVISKAQLSKGGIAGTIVDVRLVFKLGLENGATGLILCHNHPSGELNP 187 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 S+ADK IT++I + + +D+++LDH++I +Y SF + G Sbjct: 188 SQADKQITKKIKTAGEILDVKILDHLIITETKYYSFVDEGI 228 >UniRef50_A5KLJ1 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5KLJ1_9FIRM Length = 233 Score = 237 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 79/224 (35%), Positives = 123/224 (54%), Gaps = 3/224 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLEN---FGSLYG 57 +K + P EK KFG LTD ELLA+ +RTGT+G++ L L++++L L G Sbjct: 7 IKEMYKEDRPYEKCEKFGAENLTDTELLAILIRTGTKGENSLELSRKLLYKNGFHNGLAG 66 Query: 58 LLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTG 117 + ++ + GIG K QL ++EL++R + SP ++ + Sbjct: 67 IHKWSLDELIQIKGIGKVKAIQLVCLSELSKRLARTSTVGKLDFSSPRTIADYYMEDMRH 126 Query: 118 EEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGC 177 REI +IFL+++ R+I + GT++ V PRE+ EA K NA +IL HNHP G Sbjct: 127 RTREILKLIFLNTRCRLIGECNVSEGTIDSALVSPRELFIEAFKRNAYGIILLHNHPGGD 186 Query: 178 AEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 PS+ D +IT RI ++ + + +R+ DHIVIG +VS E+G+ Sbjct: 187 PTPSREDVMITRRIYEAGELLGIRLFDHIVIGDNCFVSMKEKGF 230 >UniRef50_Q82ZX1 UPF0758 protein EF_2926 n=40 Tax=Firmicutes RepID=Y2926_ENTFA Length = 232 Score = 237 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 74/221 (33%), Positives = 128/221 (57%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 ++ +PRE++L G AL++ ELLA+ LRTG++ DV+T+A +L+ F L L Sbjct: 8 IREMPSDCLPRERLLAIGEKALSNQELLAILLRTGSKEADVMTVAATLLKQFKQLSYLQQ 67 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + + GIG K +L+ EL R Y + + S + + L ++ G ++ Sbjct: 68 ATLNELMAIKGIGQVKAIELRAAIELGCRIYQSSQIKFGKVTSSQQVAQRLLQEMKGLQQ 127 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E + I+L++++ +I + +F G+LN HPREI REA+K +++ ++LAHNHPSG P Sbjct: 128 EHLICIYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTP 187 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 S D T+R+ + + M +++LDHI++G Y+S E + Sbjct: 188 SPQDIQFTKRMEECGEMMGIQLLDHIILGDSGYISLREENF 228 >UniRef50_Q6F7Z8 UPF0758 protein ACIAD3126 n=19 Tax=Proteobacteria RepID=Y3126_ACIAD Length = 271 Score = 236 bits (603), Expect = 3e-61, Method: Composition-based stats. Identities = 82/223 (36%), Positives = 140/223 (62%), Gaps = 1/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K + PRE++L G +L+D ELLA+FLRTG++ + LA+ M+++FG L + Sbjct: 20 IKFWPEQERPRERLLHSGPESLSDAELLAIFLRTGSKQHSAVELARLMIQHFGGLNPVFD 79 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESP-LLSPEMTREFLQSQLTGEE 119 + ++ S HGIG K+A L + EL RRY N +++ L S + ++L+ +L GE+ Sbjct: 80 ASLQELSHFHGIGTTKYAHLMAVKELGRRYLNHYFHQDALNLNSSRLVLDYLRYELLGEK 139 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 +E+F V+ LDS+ R + ++LF G+LN + +R A++ +A +++AHNHP G AE Sbjct: 140 QEVFAVLCLDSELRKLNFKKLFYGSLNACNISINHTLRYALQQHACHIVIAHNHPFGKAE 199 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS AD +T ++ ++CQ +++++LDH +I + SFAER + Sbjct: 200 PSAADLDLTHQLYQACQLVEIKLLDHFIIAKDGTFSFAERALL 242 >UniRef50_A1B4F1 UPF0758 protein Pden_2304 n=44 Tax=Alphaproteobacteria RepID=Y2304_PARDP Length = 263 Score = 236 bits (603), Expect = 4e-61, Method: Composition-based stats. Identities = 76/214 (35%), Positives = 123/214 (57%) Query: 9 MPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSG 68 RE+ ++ G +A+ D ELL L L +DV LA+ +L+ FG +L++ + + Sbjct: 50 RLRERFMQGGAAAMPDYELLELVLFRAIPRQDVKPLARRLLDRFGDFNRVLSAPPARLAE 109 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 V G+G A +LK + A+R R+ L S + ++ + + E E F V++L Sbjct: 110 VSGLGPAVLQELKIVEAAAQRLARSRVMHRPVLTSWDALLDYCHTAMAHGEIEQFRVLYL 169 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 D ++ +I GT++HV V+PREI+R A++++ASALIL HNHPSG PS+AD +T Sbjct: 170 DRKNVLIADEEQARGTVDHVPVYPREIMRRALELSASALILVHNHPSGDPTPSQADIGMT 229 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 RI+ + + M + V DH++IGR +SF G + Sbjct: 230 NRIVAAAEVMGIAVHDHLIIGRSRELSFRSEGLL 263 >UniRef50_Q2S042 UPF0758 protein SRU_2338 n=1 Tax=Salinibacter ruber DSM 13855 RepID=Y2338_SALRD Length = 233 Score = 236 bits (603), Expect = 4e-61, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 122/227 (53%), Gaps = 5/227 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKD----VLTLAKEMLENFGSLY 56 + + PREK+L G + L+D E+LAL L +GTR D + L + +L+++GSL+ Sbjct: 6 IHEWDESDQPREKLLTHGPTVLSDAEVLALLLGSGTRTSDGPVSAVELGRALLQSYGSLH 65 Query: 57 GLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMR-EESPLLSPEMTREFLQSQL 115 + + ++ + G+G AK +L E RR + R + E + P + L Sbjct: 66 EVSQRKPKELTRTRGVGPAKATKLAAAFEAGRRVESQRQQDERMQVTCPADVADVYGPLL 125 Query: 116 TGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPS 175 ++E+F V+ L++ + +I + G L+ V PR + +AI +A+A+I HNHPS Sbjct: 126 RDLDKEVFKVVHLNTANVIIGDYTVSEGGLSSSVVEPRGVFEQAILDDAAAVICLHNHPS 185 Query: 176 GCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 G EPS+ D IT ++ ++ M + V DH++I ++ S AERG I Sbjct: 186 GNPEPSREDIRITRQLAEAGGTMGIPVHDHLIIAGTKHTSLAERGVI 232 >UniRef50_C8WXL6 DNA repair protein RadC n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WXL6_ALIAD Length = 233 Score = 235 bits (601), Expect = 6e-61, Method: Composition-based stats. Identities = 76/216 (35%), Positives = 124/216 (57%) Query: 7 LLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQF 66 PRE++++ G SAL ELLA +++G ++V +A+ + + G L L E + Sbjct: 14 EDGPRERLMRLGPSALRVDELLACIMQSGNGKQNVYEIAQSLCRHLGDLDRLADLEVAEL 73 Query: 67 SGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVI 126 V GIG AK Q+ EL RR E+ + + E +++ +L ++E F+ + Sbjct: 74 LSVPGIGPAKAVQIAAAVELGRRVARKPPGEKRQIRTAEDAAKYVMDRLRYLKKEHFVTL 133 Query: 127 FLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKL 186 LD++HRV+ G+L+ VHPREI R AI+I+AS+++ HNHPSG PS D Sbjct: 134 LLDTKHRVLAEDTSSVGSLDASIVHPREIFRRAIRISASSILCIHNHPSGDPSPSPEDIA 193 Query: 187 ITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +T+R++++ + + + VLDHIVIG G +VS G++ Sbjct: 194 VTKRLVEAGRVLGIEVLDHIVIGDGRFVSLRAEGYL 229 >UniRef50_A5ZRS6 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5ZRS6_9FIRM Length = 236 Score = 235 bits (600), Expect = 7e-61, Method: Composition-based stats. Identities = 89/227 (39%), Positives = 129/227 (56%), Gaps = 5/227 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLEN-----FGSL 55 MK + P EK ++ G + L+D ELLA+ LR GTRG + LTLA ++L + + L Sbjct: 5 MKEIPESQRPYEKCIREGENTLSDSELLAVILRCGTRGMNSLTLANDILSHMEQSPYPGL 64 Query: 56 YGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQL 115 GLL +HGIG K QLK I EL++R + R SP+ + QL Sbjct: 65 LGLLHCSVSDLKKIHGIGTVKAVQLKCIGELSKRIASTAARISLDFNSPDSIAAYYMEQL 124 Query: 116 TGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPS 175 +E+EI + + LD+Q+ ++ L GT+N + PRE+ EA++ +A LIL HNHP Sbjct: 125 RHQEQEIMICMMLDNQNHLLGDTMLSKGTVNATLITPREVYLEALRYHAVNLILIHNHPG 184 Query: 176 GCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 G PSK DK ITERI ++ + + + +LDHI+IG Y+SF E G + Sbjct: 185 GNPAPSKCDKEITERICQAGEMLGINLLDHIIIGDHRYISFREEGLM 231 >UniRef50_C7PSZ0 DNA repair protein RadC n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PSZ0_CHIPD Length = 237 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 79/223 (35%), Positives = 121/223 (54%), Gaps = 1/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLEN-FGSLYGLL 59 +K+ + PREK++ G SAL+D ELLA+ L G + K L LA+E+L +L + Sbjct: 14 IKDWPEDDQPREKLISKGNSALSDAELLAILLNDGYKQKSALALAQEVLRAASNNLSEMG 73 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 EQ + GIG AK ++ + ELARR M ++ + + + L Sbjct: 74 KLTLEQLKKIQGIGTAKATKIIAVMELARRRQAGCMLQKKTIRQGRDAALYFKPLLGDAA 133 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 E F V++L+ RV+ HR + G + V P+ I REA+++ A+ +IL HNHPSG Sbjct: 134 LESFHVLYLNHASRVLQHRCISIGGITGTIVDPKVIFREALELGATQVILCHNHPSGNLR 193 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS AD ITE++ + + +D+ VLDHI++ Y S E G+I Sbjct: 194 PSTADIQITEKLKAAGRLLDISVLDHIIVSEAGYCSMVEEGFI 236 >UniRef50_A3ER13 DNA repair protein (RadC) n=3 Tax=Leptospirillum RepID=A3ER13_9BACT Length = 237 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 82/220 (37%), Positives = 128/220 (58%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 ++ S+ PRE++ G +AL D ELLA+ LR G RG+ + LA+ +L +G L G+ Sbjct: 10 VREWSEGDRPRERLRDRGPAALHDAELLAILLRVGNRGESSVALAQRLLAKYGGLEGVAA 69 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + S + G+G+AK AQ+ EL RR + S + L ++L E++ Sbjct: 70 AGFSALSSLSGMGLAKAAQIMAGIELGRRVSGKARSFRPEIRSARDVYDILGARLRDEKK 129 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F V+ LD +HR+ R+ G+L+ VHPRE + AI+ +A+A++ HNHPSG EP Sbjct: 130 ESFWVLLLDQRHRLQNAVRISEGSLSMTLVHPREAFQPAIRDSAAAVLFVHNHPSGDPEP 189 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 S D +TER+ + + + +RVLDH+V+G +VS ERG Sbjct: 190 SSDDWSLTERLKECGELLGIRVLDHVVLGDHAWVSLEERG 229 >UniRef50_A5FRP1 DNA repair protein RadC n=6 Tax=cellular organisms RepID=A5FRP1_DEHSB Length = 228 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 77/222 (34%), Positives = 127/222 (57%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +++ PRE++ G AL+ VELLA+ L G G+ VL A+ ++ +FG G+ Sbjct: 7 IRDLPLAERPRERLQSLGAGALSSVELLAVILGRGVAGEPVLQSAQRLIAHFGGPSGIAC 66 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + E+ S + GIG+AK QLK ELA+R ++ + + +PE + + + E++ Sbjct: 67 ASVEELSKLKGIGLAKACQLKAAFELAKRAGGIKGEYQPCIKTPEDVFQIIYPLVCDEKK 126 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F + LD + R+I + G+L VHPRE+ +EA+ +A+++ILAHNHPSG EP Sbjct: 127 EYFFCLMLDVKSRLIRVGHISVGSLEESVVHPREVFKEALSASAASVILAHNHPSGDTEP 186 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S D ++ R+ ++ M + VLDHI+IG + S +G + Sbjct: 187 SHDDIGLSARLREAGGIMGIEVLDHIIIGGQSFTSLKRQGLL 228 >UniRef50_A9KL05 DNA repair protein RadC n=7 Tax=Clostridiales RepID=A9KL05_CLOPH Length = 232 Score = 233 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 69/225 (30%), Positives = 115/225 (51%), Gaps = 3/225 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEML---ENFGSLYG 57 MK+ P EK + G +AL+D EL+A+ LRTG++ LA ++L + L G Sbjct: 7 MKDLPASERPYEKCERDGAAALSDAELIAVILRTGSKETRSTELAAKILSYSNTYPGLRG 66 Query: 58 LLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTG 117 + + F +HGIG K QL + EL+ R + P E+ + Sbjct: 67 ISRMTQKDFMSIHGIGRVKAIQLLCLTELSIRMAKATFADGIRYTDPSSVAEYYMQDMRS 126 Query: 118 EEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGC 177 + E ++ D++ +++ + GT+N + PRE+ A+K A +IL HNHPSG Sbjct: 127 LKTEQSRLLMFDTKSKLLREEIISIGTVNASIMSPREVFLLAVKYEAVYIILLHNHPSGD 186 Query: 178 AEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PSK D +T+R+ ++ + + + ++DHI+IG Y+S E+G I Sbjct: 187 PTPSKEDIAVTKRMKEAGELLGVTLMDHIIIGDNRYISLKEQGII 231 >UniRef50_Q4FQM6 UPF0758 protein Psyc_1834 n=3 Tax=Moraxellaceae RepID=Y1834_PSYA2 Length = 227 Score = 233 bits (594), Expect = 4e-60, Method: Composition-based stats. Identities = 87/221 (39%), Positives = 138/221 (62%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K+ + PREK+LKFG + L+D E+LA+FLRTGT+ + + LA+ ++E FGSL LL Sbjct: 3 IKDWHEDDRPREKLLKFGAAHLSDAEILAIFLRTGTQSQSAIDLARHLIEQFGSLAELLA 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + E HGIG AK+AQ+ E+ RRY + +++ L +M ++++ + L GE R Sbjct: 63 APQETVLACHGIGPAKYAQILASLEIGRRYLDSQLKTGQGLGRSQMVKDYISTHLRGEPR 122 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E+F V+ LD+ +I LF+G ++ V + ++R A+ S LI+AHNHP A P Sbjct: 123 EVFAVLCLDNALNLINFEILFTGGISSCSVCIKHVLRHALSHATSQLIIAHNHPHTDATP 182 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 S AD L+T + K+C +DL ++DH+++GR E +S+AE Sbjct: 183 STADNLLTYELKKACDLIDLSLIDHVIVGRNETLSYAENCL 223 >UniRef50_D1R5B1 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5B1_9CHLA Length = 238 Score = 233 bits (594), Expect = 5e-60, Method: Composition-based stats. Identities = 76/219 (34%), Positives = 119/219 (54%) Query: 3 NNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSE 62 + PRE++L+ G L+ VEL+A+ L +G +G +L L++E++ FGSL L + Sbjct: 12 SLPAAERPRERLLQHGADVLSSVELIAVLLGSGMKGMPILQLSQEIMSRFGSLQNLADAT 71 Query: 63 YEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREI 122 E+ + G+G AK QLK L +R ++ + + +P ++ L +E Sbjct: 72 IEELCQIKGLGTAKAIQLKAALNLGKRLSRTQVSAKFQIRTPLHAYHLVKDDLEKAMQEH 131 Query: 123 FMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSK 182 F+ I D + VI + GTL VHPRE+ AI+ A++LIL HNHPSG PSK Sbjct: 132 FLTILQDVKGYVICSPTVALGTLTATVVHPREVFYPAIRHRAASLILVHNHPSGDPTPSK 191 Query: 183 ADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 D +T+ ++ + + + V DHI+IGR YVS E G+ Sbjct: 192 EDLDVTKTLVAVGRLVGICVNDHIIIGRDRYVSLREEGF 230 >UniRef50_UPI000185C66E DNA repair protein RadC n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185C66E Length = 221 Score = 232 bits (592), Expect = 6e-60, Method: Composition-based stats. Identities = 74/216 (34%), Positives = 115/216 (53%), Gaps = 1/216 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLL 59 +KN PREKM+ G +AL++ ELLA+ L +G+ + + L++ +L + G SL L Sbjct: 3 IKNWEDTDKPREKMITQGKTALSNAELLAILLGSGSANESAVALSRRILASVGNSLTALG 62 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 Q + GIG AK + E+ RR + + +P +Q + Sbjct: 63 KQTLAQLTTFKGIGEAKAITILAATEMGRRRAAETHEPQPKIEAPRHVFTLMQPLIGDLP 122 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 E F V++L+S +RVI RL SG + H V R + + A++ A +LIL HNHPSG Sbjct: 123 HEEFWVLYLNSANRVIHKCRLSSGGITHTTVDIRLLFKNALEQGAVSLILVHNHPSGSTT 182 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVS 215 PSK D +TER+ + +D+++LDHI++ EY S Sbjct: 183 PSKEDLELTERVRNAGDTLDIKLLDHIIVTEKEYYS 218 >UniRef50_B9E733 DNA repair protein RadC homolog n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E733_MACCJ Length = 223 Score = 232 bits (592), Expect = 7e-60, Method: Composition-based stats. Identities = 81/217 (37%), Positives = 129/217 (59%) Query: 6 QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQ 65 + PRE++L +G + LT+ ELL+L + +G R ++V T+A+ +LE+ G + L +++ Sbjct: 7 ECDKPRERLLTYGAAQLTNQELLSLIIGSGVREENVYTVAQRLLEHIGHIGDLRYMTFQE 66 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMV 125 + GIG K A + I ELA R + + SP L +L +E F+V Sbjct: 67 LITIKGIGQKKAAMILAIIELAIRMHTHTKETRIKVKSPACAANLLMERLRYMTQEHFIV 126 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 + L++++ V+ +F G+LN VHPRE+ +EA+K +A+A+I+ HNHPSG EPS D Sbjct: 127 LSLNTKNIVMHESTIFIGSLNASIVHPREVFKEAVKRSAAAIIVVHNHPSGDPEPSYEDI 186 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 T+R+IK + + VLDHI+IG G YVS E+G + Sbjct: 187 EATKRLIKCGEIFGIDVLDHIIIGDGYYVSIKEKGIL 223 >UniRef50_C7RDS9 DNA repair protein RadC n=3 Tax=Anaerococcus RepID=C7RDS9_ANAPD Length = 228 Score = 232 bits (592), Expect = 7e-60, Method: Composition-based stats. Identities = 83/222 (37%), Positives = 134/222 (60%), Gaps = 2/222 (0%) Query: 2 KNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTS 61 K+ + PREK+++ G S+LTD ELLA+ L TGT+ K+V+ L+KE+LE F S LL Sbjct: 8 KDLEKYDKPREKLIREGFSSLTDYELLAIILSTGTKDKNVIELSKEILEVF-SYEELLEI 66 Query: 62 EYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRM-REESPLLSPEMTREFLQSQLTGEER 120 E ++ + + GI AK ++ +L +R + ++ + S + + + +L+ ++ Sbjct: 67 EVKELTDIKGIKQAKATRVVAGLQLGKRINERVLDKKIEKITSSKDVYDIMSPRLSNLKK 126 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F I LDS++ +I + G L V+PRE+ + AIK +A ++IL HNHPSG +P Sbjct: 127 EYFYAILLDSKNVIIAKEVISIGDLGSTVVNPREVFKPAIKKSAKSMILVHNHPSGNPKP 186 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S D LIT+R+ ++ +D++VLDHIVIG Y SF + G + Sbjct: 187 STEDFLITDRLAEAGDILDIKVLDHIVIGNSSYYSFKKEGNL 228 >UniRef50_B4CZF8 DNA repair protein RadC n=2 Tax=Verrucomicrobia RepID=B4CZF8_9BACT Length = 231 Score = 232 bits (591), Expect = 9e-60, Method: Composition-based stats. Identities = 80/227 (35%), Positives = 125/227 (55%), Gaps = 6/227 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 + + PREK+ G AL+D EL+A+ LRTG G + + +A+++L F SL GL Sbjct: 6 IHELPEQDRPREKLAAQGAGALSDSELIAILLRTGLPGANAVDVARKLLAEFKSLSGLAR 65 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 ++ S + G+G AK QL LA R + L SPE+ + L ++ R Sbjct: 66 CSVKELSKIKGVGPAKAVQLVAAFGLASRLARETL-ARQRLDSPELINDLLGPEMRALGR 124 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E ++ LD+++ +I + G+LN HPRE+ R A+ +A A+IL HNHPSG P Sbjct: 125 ESLRLVLLDTKYLLIRVEEISHGSLNESIAHPREVFRPALIYSAYAVILVHNHPSGDPTP 184 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGE-----YVSFAERGWI 222 S AD +T R+++ + + +R+LDH+++G G+ Y SF E G I Sbjct: 185 SSADHQLTRRLVQGAELLQIRLLDHVILGTGDNGRLPYFSFKEAGII 231 >UniRef50_C7M9C6 DNA repair protein RadC n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M9C6_CAPOD Length = 225 Score = 231 bits (589), Expect = 1e-59, Method: Composition-based stats. Identities = 73/222 (32%), Positives = 118/222 (53%), Gaps = 1/222 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLL 59 +KN + PREKM+ G +AL++ ELLA+ L +G+ + + L++ +L + SL L Sbjct: 3 IKNWADTDKPREKMISQGKTALSNAELLAILLGSGSADESAVELSRRILASVNNSLTTLG 62 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 +Q GIG AK + E+ RR + + +Q + Sbjct: 63 KQSLQQLQAFKGIGQAKAITILAATEMGRRRAAETPEPQPKIEVAHNVFVLMQPLIGELP 122 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 E F V++L+S +RVI RLFSG + H V R + + A++ A ALIL HNHPSG Sbjct: 123 HEEFWVLYLNSTNRVIHKARLFSGGITHTTVDVRLLFKTALEQGAIALILVHNHPSGSTT 182 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 PSK D +T+R+ + + +D+++LDH+++ EY+SF + Sbjct: 183 PSKEDIELTQRVKTAGEMLDIKLLDHVIVTEKEYLSFLDERL 224 >UniRef50_Q6MAB0 UPF0758 protein pc1765 n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Y1765_PARUW Length = 231 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 69/222 (31%), Positives = 128/222 (57%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +++ + PRE++++ G +L+ +E+LA+ L +G++ VL +++ ++ FG L L+ Sbjct: 8 IQSLPKEERPRERLIRHGADSLSLIEILAIILGSGSKVASVLEVSRALVTRFGGLEALMQ 67 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + V GIG AK QLK L R +++ + + ++ +L E R Sbjct: 68 ATLTELLEVQGIGFAKAIQLKAALNLGFRATRQQIKSRYLIEHSSHAYQLVKDELENENR 127 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 EIFM IF D++ +IT+ + G+L+ VHPRE+ AI+ A++LI+ HNHPSG P Sbjct: 128 EIFMAIFQDTKGYLITYEVISIGSLSQTLVHPREVFYSAIRHKAASLIVVHNHPSGDPMP 187 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S D +T+ +++ + + + + DH++IG+ YVSF ++ + Sbjct: 188 SNQDLKLTQILLEGSRLLGIPLRDHLIIGKNSYVSFKDQNLL 229 >UniRef50_C4Z083 DNA repair protein RadC n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z083_EUBE2 Length = 230 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 76/219 (34%), Positives = 122/219 (55%) Query: 4 NSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEY 63 + L+P EK L+ G +L + ELLA +RTGT G + LA+++LE+ G+L GL Sbjct: 11 KEEKLLPYEKCLQHGAMSLDNAELLAAIIRTGTNGLSSIQLAEKLLESAGNLKGLYDMSV 70 Query: 64 EQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIF 123 + + GIG AK Q+ I EL+RR + RE + E + + E+E Sbjct: 71 SELMQIKGIGKAKAVQICCILELSRRIAKQKARERLDFSNAETIAGYYMEDMRHLEKEHL 130 Query: 124 MVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKA 183 +++ LD++ R+I + L GT V REI +EA+ A++++L HNHPSG PS+ Sbjct: 131 VLVMLDNRCRLIRDKVLSVGTSTGSMVSVREIFKEALDNRAASVVLLHNHPSGNPSPSRE 190 Query: 184 DKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 D +T ++++ + + + +LDHIVIG Y SF + +I Sbjct: 191 DMKVTRSVMEAGKIIGIELLDHIVIGDNSYFSFKQMQYI 229 >UniRef50_B7C9V0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9V0_9FIRM Length = 224 Score = 230 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 77/222 (34%), Positives = 133/222 (59%), Gaps = 1/222 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K PREK L++G+ +L+D+EL+AL L++G + + V +A ++L+ L L+T Sbjct: 3 VKEMEVEQRPREKALRYGLESLSDLELVALILQSGNKNRSVFEIASDVLKESEGLSKLMT 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + GI K QL EL++R ++ +P+L PE E+ + + + Sbjct: 63 MHVNTLMQIQGIREVKALQLLASVELSKRVIKSKVYH-APILKPEDVIEWFKFEYGTMSQ 121 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+ ++LD++ ++I+HR LF GTLN VHPRE+ +EA NA+++++AHNHPSG P Sbjct: 122 ECFIALYLDTKSKLISHRVLFKGTLNESVVHPREVFKEAFLQNANSVLIAHNHPSGDCTP 181 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 SKAD +T +++ M + ++DHI++ + +Y SF E ++ Sbjct: 182 SKADFEVTYKMVHVAMTMGVCLVDHIIVCKNQYYSFKEHKYL 223 >UniRef50_Q0AWG3 UPF0758 protein Swol_1642 n=12 Tax=Firmicutes RepID=Y1642_SYNWW Length = 235 Score = 229 bits (585), Expect = 5e-59, Method: Composition-based stats. Identities = 83/226 (36%), Positives = 131/226 (57%), Gaps = 4/226 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLL 59 +K + + PREK++ G L + ELLA+ L +GTR + L LA+++L G SL L+ Sbjct: 10 IKEMPETMRPREKLIARGEDKLDEAELLAIVLGSGTREMNALELARQLLARHGGSLRFLM 69 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARR---YYNVRMREESPLLSPEMTREFLQSQLT 116 ++ E+ + GIG+AK +K E+ RR +R +SP E RE ++ Sbjct: 70 SATLEELTAEKGIGMAKAVSIKAAIEMGRRVVGNIQLRRIIKSPEDVQEAVRELAMEEMR 129 Query: 117 GEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSG 176 +RE F V++LD + +IT + + G L+ VHPRE+ + A+K +A+++IL HNHPSG Sbjct: 130 HYDREHFRVLYLDRKGGLITMQDISIGGLHSSIVHPREVFKTAVKKSAASMILVHNHPSG 189 Query: 177 CAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS+ D IT R+I++ + M + +LDH++IG Y S RG I Sbjct: 190 DPTPSQEDIEITRRLIEAGKIMGIEILDHVIIGEINYCSLKARGLI 235 >UniRef50_Q64AS5 DNA repair proteins n=1 Tax=uncultured archaeon GZfos29E12 RepID=Q64AS5_9ARCH Length = 403 Score = 229 bits (584), Expect = 6e-59, Method: Composition-based stats. Identities = 71/214 (33%), Positives = 124/214 (57%), Gaps = 2/214 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K+ Q PREK+ ++G L + ELLAL LRTG + ++ + ++ ++ + L L Sbjct: 183 IKDICQAERPREKLERYGAGYLNNDELLALILRTGHQKENAIEMSHRLINEY-GLDKLSD 241 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNV-RMREESPLLSPEMTREFLQSQLTGEE 119 + + GIG AK Q+ + E +R+ + +E + PE + +L ++ Sbjct: 242 LALNELQEIKGIGFAKACQIIALFEFNKRHNKAVKTKEIVTIEKPEDVYNYFVDELKDKK 301 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 +E F + LDS++++I + GTL++ VHPRE+ +EAIK +A+ +IL HNHPSG E Sbjct: 302 KEHFYALLLDSKNKLIKKDLVSVGTLDNSLVHPREVFKEAIKNSAAGVILVHNHPSGDPE 361 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEY 213 PS+ D IT++I K+ ++++VLDH++I + Sbjct: 362 PSENDVEITQKIAKAGNILNIKVLDHVIIAEKGW 395 >UniRef50_D2BJ47 DNA repair protein n=5 Tax=Dehalococcoides RepID=D2BJ47_DEHSV Length = 275 Score = 228 bits (581), Expect = 1e-58, Method: Composition-based stats. Identities = 86/217 (39%), Positives = 124/217 (57%) Query: 6 QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQ 65 RE+ LK G+ L D E++ L L GT +D AKE +++FGSL +L + + Sbjct: 26 HRQRLRERFLKAGLDGLNDYEVVELLLTLGTPRRDCKQAAKEAIKHFGSLRAVLEASPAE 85 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMV 125 + GIG L I E++RRY + E+ + + ++L + G ++E+F V Sbjct: 86 LLSIKGIGEVNSMALTLIREVSRRYLKDGIMEKPVCNTAQQVFDYLYCAMRGLKKEVFKV 145 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 I+LDSQHRV+ LF+GT+ + PRE+I AI NASALI HNHPSG EPS+ADK Sbjct: 146 IYLDSQHRVLELADLFTGTVASGSIVPREVIAAAISQNASALIFVHNHPSGKIEPSQADK 205 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +T ++ + M +R LDHI+IG Y SFA G + Sbjct: 206 DVTRELVYAAMVMKIRALDHIIIGDNCYFSFAAAGIM 242 >UniRef50_A1BHA1 UPF0758 protein Cpha266_1761 n=11 Tax=Chlorobiaceae RepID=Y1761_CHLPD Length = 223 Score = 228 bits (581), Expect = 1e-58, Method: Composition-based stats. Identities = 72/222 (32%), Positives = 124/222 (55%), Gaps = 2/222 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 + + PRE+ L+ G ++L+ ELLAL LR+GTR +++ ++ F L L Sbjct: 3 IHDLDPENRPRERFLRTGPASLSPSELLALVLRSGTRNNNIIDTCNALIARF-GLERLAD 61 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + GIG AK Q+ + EL +R + R + L S E++ ++ + Sbjct: 62 IPLSELQEIKGIGQAKAMQIIAVFELNKRIHYSRNLQRKVL-SARDVFEYMAGRVPDITK 120 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E V+ L++++++I + ++ GTLN HPRE+ + AI+ +A A+IL HNHPSG EP Sbjct: 121 EHLFVLHLNTKNQIIRNEQVTVGTLNASLAHPREVFKSAIRESAHAIILVHNHPSGDVEP 180 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S AD+ +TE + ++ F+ + +LDH++IG + SF E + Sbjct: 181 SNADRQVTEILRQAGSFLQIDLLDHVIIGVDTWFSFREHSLL 222 >UniRef50_B7ANR2 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ANR2_9BACE Length = 246 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 73/227 (32%), Positives = 117/227 (51%), Gaps = 6/227 (2%) Query: 2 KNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLEN------FGSL 55 K+ + P EK + +G AL+D ELLA+ ++TGT G + LA +++ +L Sbjct: 16 KDLPASMRPYEKFMLYGAGALSDAELLAVIIKTGTTGISSIELAAGIIDMACNGSGSTNL 75 Query: 56 YGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQL 115 GL YE + GIG K Q+ + EL+RR +P ++ L Sbjct: 76 AGLTGIGYEDLVSIRGIGSVKALQIMAVIELSRRISKSCAYRRLDFRNPVSIADYYMEDL 135 Query: 116 TGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPS 175 E E +++ LD++ R+I + +GT+N V PREI A++ A +++ HNHPS Sbjct: 136 RHAECERLVLVMLDTKLRLIKDEIISTGTVNASIVSPREIFVAALRAGAVFIVMLHNHPS 195 Query: 176 GCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 G AEPS D IT R+ + + + + ++DHI+IG +VS E G + Sbjct: 196 GDAEPSSNDIAITRRVQLAGEMLGISLIDHIIIGDNRFVSLKESGLM 242 >UniRef50_A6DS55 DNA repair protein RadC n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DS55_9BACT Length = 235 Score = 227 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 77/229 (33%), Positives = 135/229 (58%), Gaps = 7/229 (3%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLL 59 +K+ ++ PRE+ML+ G + L++ ELLAL + +GTR + L LA+E+L +F S++ L Sbjct: 5 IKDLAEFDRPRERMLQLGEAQLSESELLALIIGSGTREQSALGLAREILAHFDNSVFRLS 64 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 + E +HG+G AK L+ + LAR+ E+ + PE +L L G+ Sbjct: 65 RATLEDLETIHGVGPAKATSLRAVFALARKLVAEEAMEQFTIHRPESAAPYLIQLLAGKS 124 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 +E F ++ LD+++R++ ++ G L+ VHPRE+ REA++ + +ILAHNHPSG Sbjct: 125 KEEFHILLLDTKNRLMRSSQISIGLLDRSHVHPREVFREALRYGTAKIILAHNHPSGDPS 184 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRG------EYVSFAERGWI 222 PS D T+ +I++ + + ++V+DH++IG ++VS + G + Sbjct: 185 PSPQDIECTKNLIEAGEILGVKVVDHLIIGHKLPGDSRQFVSLRQLGLV 233 >UniRef50_C9LCX8 DNA repair protein RadC n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LCX8_9BACT Length = 228 Score = 227 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 66/223 (29%), Positives = 114/223 (51%), Gaps = 1/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLL 59 + S+ PREK + G L+ ELLA+ + +G GKD + L KE+L + SL L Sbjct: 5 INQWSKEDRPREKFEELGPRQLSSAELLAILIGSGCPGKDAVVLMKEILNDHDNSLRRLG 64 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 + + GIG AK + EL RR + + P+ F + +L Sbjct: 65 RVDIQSLCRYAGIGPAKAITILAACELGRRRAEEPAEQRPLMDGPQKIYSFFRQRLEDTP 124 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 E F +FL+ + ++++ + G L V R + +A++ A+AL + HNHPSG Sbjct: 125 HEEFHAMFLNRRLQLVSEALIGRGGLTETTVDVRLLFGKALEAKATALAICHNHPSGNPR 184 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS+AD +T+++ ++ + +D+R++DHI++ Y S+ E G + Sbjct: 185 PSQADDRLTQKVAQAARLLDIRLVDHIIVADKCYYSYQEEGKL 227 >UniRef50_Q2LSS5 DNA repair protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSS5_SYNAS Length = 308 Score = 227 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 122/217 (56%) Query: 6 QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQ 65 ++K K G+ AL D E + L L KD+ +L+K++LE FGSL G++ +E E+ Sbjct: 90 HRQRLKKKFFKCGLQALHDYEAVELLLSYAIPRKDIKSLSKDLLERFGSLKGIMDAELEE 149 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMV 125 + V GI ++ + E++ Y + RE+ + +F ++ L G + E F V Sbjct: 150 LTAVRGISAHAAGLVRMVKEMSALYLQEKAREKPQISCTGELLDFCKTALGGLKDENFCV 209 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 ++LD+Q+R+I + G +N V+PR++I A+ +SALIL HNHPSG +PS AD Sbjct: 210 LYLDTQNRIIAFETIQKGIVNQAVVYPRQVIERALSHKSSALILVHNHPSGFVKPSDADI 269 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +T I + + +D+ V DH++IG + SF E G + Sbjct: 270 RLTRTITDTAKLLDIMVHDHLIIGENRFFSFREEGIM 306 >UniRef50_D2MNQ5 Putative DNA repair protein RadC n=1 Tax=Bulleidia extructa W1219 RepID=D2MNQ5_9FIRM Length = 223 Score = 227 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 82/221 (37%), Positives = 132/221 (59%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +KN + PREK L++G+S+L++ ELLAL LRTG R L +A E+L + GL Sbjct: 2 LKNIPVMEQPREKALQYGLSSLSNRELLALQLRTGYRHHSALEVADEILARADGISGLPR 61 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 ++ + GI K +L I E+ RR ++ + P + ++L+ ++ + Sbjct: 62 LSRQELIQIPGISQIKALELLAIFEIVRRSSAAKLPTLPRVQHPSVLFDWLKQEIGTSLQ 121 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+V+FL S RV++++ LF GT+N V PREI +EA+ +N+ +IL HNHPSG P Sbjct: 122 EKFLVVFLASDQRVLSYKILFVGTINASMVFPREIFKEALLLNSPNIILVHNHPSGNLSP 181 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 S+ D +T+RI ++ Q M ++VLDHI++ + +Y SF + G Sbjct: 182 SQEDISLTKRIKEAGQLMGVKVLDHIIVTQSDYFSFVQEGI 222 >UniRef50_B9L1S0 DNA repair protein radC homolog n=4 Tax=Bacteria RepID=B9L1S0_THERP Length = 261 Score = 226 bits (576), Expect = 5e-58, Method: Composition-based stats. Identities = 81/221 (36%), Positives = 123/221 (55%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K PRE++ ++G LT+ ELLA+ L TGTRG+ VL LA+ +L FG L GL Sbjct: 36 IKELPASERPRERIQQYGPEVLTNAELLAIILNTGTRGESVLDLAQRLLVEFGGLVGLAR 95 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 ++ HG+G AK A+LK EL RR + E + +PE +++ E+ Sbjct: 96 ADLASLRRFHGLGEAKAAKLKAALELGRRLALAQPEERPVIRTPEDVYAIAGAEMATLEQ 155 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E V+ LD+++RV+ + G +N +V E+ REAI+ N AL+L HNHPSG P Sbjct: 156 EQLRVVLLDTRNRVVRTVTVAQGHVNGAQVRIAELFREAIRANTPALVLLHNHPSGDPTP 215 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 S+ D +TE +++ + + V+DH+VIG G + S G Sbjct: 216 SRQDIELTESAVEAGTLLGIEVVDHLVIGHGRFCSLRRLGL 256 >UniRef50_D1QST5 DNA repair protein RadC n=13 Tax=Bacteroidales RepID=D1QST5_9BACT Length = 234 Score = 225 bits (575), Expect = 6e-58, Method: Composition-based stats. Identities = 66/223 (29%), Positives = 118/223 (52%), Gaps = 1/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGS-LYGLL 59 + + ++ PREK+ + G SAL++ ELL + + +GT + + L K ++ + + L L Sbjct: 12 IVHWAEEDRPREKLERLGPSALSNAELLGILIGSGTPNESAVDLMKRIMMDCNNNLNTLG 71 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 Q G+G AK + EL +R + E + S + E+L ++ + Sbjct: 72 KLSIRQLEQYKGVGPAKAITILAACELGKRRAMEKAEERQSIDSSKAIYEYLHPRMQDLD 131 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 E V+ L+ +++I R+ G ++ V R I++EA+ NA+ L LAHNHPS A+ Sbjct: 132 VEEAWVMLLNQHYKLIKALRISHGGISETAVDVRIILKEALLCNATVLALAHNHPSNHAQ 191 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS D +T+R+ K+C+ + + LDH++I G Y S+ + G + Sbjct: 192 PSGPDDQLTQRVKKACEALRIYFLDHVIITDGTYYSYHDSGRL 234 >UniRef50_B9Y7M6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7M6_9FIRM Length = 228 Score = 225 bits (575), Expect = 6e-58, Method: Composition-based stats. Identities = 72/222 (32%), Positives = 129/222 (58%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 ++ PREK L GI ++ E+LAL LR+G G L +A ++L+ + GL Sbjct: 6 VREMPCEERPREKALHQGIEHCSNKEILALILRSGVPGASSLMIADQLLQRSQGVRGLSR 65 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 ++ + GI + ++ ELARR + RE + +P+ +L ++ G+++ Sbjct: 66 LTLKELMQIKGISQVRGLEILACFELARRISEEQTREIDVVANPDALMAWLGREIGGKQQ 125 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+ I+LD+++ ++ HR LF GTL+ VHPRE+ +EA+ +A +++ HNHPS P Sbjct: 126 EHFLAIYLDAKNHILEHRLLFKGTLDASIVHPREVFKEALLASACRVLVVHNHPSQDLTP 185 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S AD++IT+R+ ++ + + + +LDH+++G +Y SF G + Sbjct: 186 SLADRIITQRLKETGELIGIELLDHLIVGTTQYFSFRAHGLL 227 >UniRef50_Q38XC8 UPF0758 protein LCA_0852 n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Y852_LACSS Length = 224 Score = 225 bits (575), Expect = 7e-58, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 125/215 (58%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 L PRE++ +G ++L+D +L + LR+GT+ V +A+ +L+ + L ++ Q Sbjct: 8 LQPREQVALYGAASLSDEQLATVILRSGTQHLPVEVVAQRLLQRYPDFQDLEQADLVQLR 67 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 + GIG K +L+ I EL+RR N R + S +M + + L GE +E + ++ Sbjct: 68 QIEGIGPVKAIELQAICELSRRIQNQRTLRFGVVASSQMVGQRMIESLAGETQEQLLAVY 127 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 LD ++++I ++L+ GTLN HPRE+ + A++ +A+ IL HNHPSG PS D Sbjct: 128 LDVKNQIIQIKQLYLGTLNSSVAHPREVFKWAVQYSAAKFILVHNHPSGQLAPSTQDINF 187 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 T+RI+ Q M + LDH++IG +Y+S E G++ Sbjct: 188 TKRIVNCGQLMGITCLDHLIIGSSQYLSLREEGYL 222 >UniRef50_C0BM81 DNA repair protein RadC n=2 Tax=Bacteroidetes RepID=C0BM81_9BACT Length = 231 Score = 225 bits (575), Expect = 7e-58, Method: Composition-based stats. Identities = 75/223 (33%), Positives = 122/223 (54%), Gaps = 1/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGS-LYGLL 59 MK S PREK L+ G LTD ELLA+ L G+ G+ L+LAK +L + L L Sbjct: 9 MKAWSVEDQPREKYLRLGGQKLTDAELLAIVLGNGSVGQSALSLAKTLLIACDNDLQKLF 68 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 E+ G+G K ++K + R +V L S L+ L G Sbjct: 69 ELSIEKLMDFKGVGKVKAIKIKASLDFGYRLLHVNATVPLSLSSSGAAFSILKPVLIGLT 128 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 E F V++LD+ + +I L G V R ++++AI+ A+A+I+AHNHP+G + Sbjct: 129 YEEFWVLYLDNSNVLIERSLLGKGGFTATVVDIRLVLQQAIRWGATAMIVAHNHPTGNLK 188 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS +DK +T+++ ++ + +D+++LDHI++G+ EY SFA++ + Sbjct: 189 PSHSDKALTQKLKEAAKVLDIKLLDHIIVGKNEYFSFADQNLL 231 >UniRef50_D1VVJ8 DNA repair protein RadC-like protein n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVJ8_9FIRM Length = 236 Score = 225 bits (574), Expect = 7e-58, Method: Composition-based stats. Identities = 72/228 (31%), Positives = 129/228 (56%), Gaps = 6/228 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGS------ 54 +K+ ++ P+EK+L G SALT+ ELLAL +RTGT+ + L +++L Sbjct: 8 IKDMTEEERPQEKLLHLGPSALTNAELLALIIRTGTKELTSVELCEKILRELKRENNSSL 67 Query: 55 LYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQ 114 L GL + ++ + + G+G AK A + LA R + + ++ + SPE +++ + Sbjct: 68 LSGLRIASMDKLTAIKGVGQAKAAMIMAALTLAERLNSSSIYDKKKITSPEDAAKYVMAS 127 Query: 115 LTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHP 174 + E E+F +I L+++ + R + G +N VHPRE+ R+AI A ++IL HNHP Sbjct: 128 MRDLETEVFRIIILNTKKEIKYIREISHGIINMTVVHPREVFRQAISDGAHSIILLHNHP 187 Query: 175 SGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +G PS+ D+ +T R+++ + + + + DHI+IG + SF + G + Sbjct: 188 TGDPSPSQEDRNLTRRLVEVSKIVGIDICDHIIIGDNTFFSFLKEGIL 235 >UniRef50_C7GYN9 DNA repair protein RadC n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYN9_9FIRM Length = 230 Score = 225 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 79/224 (35%), Positives = 123/224 (54%), Gaps = 2/224 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG--SLYGL 58 MK Q PRE++++ G+ AL+ EL+A+ L TG + K V L+ +LE+ + L Sbjct: 1 MKKKKQFDAPRERLIEKGVEALSMAELIAIILSTGGKNKTVTELSHAILESKDRLGITSL 60 Query: 59 LTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGE 118 + E +GIG AK +L EL +R + + + + +PE +L E Sbjct: 61 CELDLEDLMNFNGIGEAKAMRLIAALELGKRQSEISVNIKRKIGNPEAIFHLFHEKLRYE 120 Query: 119 EREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCA 178 ++E F + L++ VI R+ G L HPRE+ + AIK AS++IL HNHPSGC Sbjct: 121 KKENFYAVMLNTAKHVIAKERISIGGLACAYAHPREVFKSAIKKAASSVILVHNHPSGCV 180 Query: 179 EPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS D LIT+R+I + + + + V+DHI+IG Y+S + G+I Sbjct: 181 TPSDEDVLITKRLINAGRIIGIEVIDHIIIGNENYLSMKKEGYI 224 >UniRef50_Q3JV52 UPF0758 protein BURPS1710b_1139 n=75 Tax=Proteobacteria RepID=Y1139_BURP1 Length = 278 Score = 223 bits (570), Expect = 3e-57, Method: Composition-based stats. Identities = 89/215 (41%), Positives = 135/215 (62%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 +PRE++L G +AL+D EL+AL L +G G DV LA +L FGSL LL + + F Sbjct: 64 DLPRERLLARGPAALSDAELVALLLGSGLPGHDVFALAHTLLARFGSLRALLDAAPDDFK 123 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 G+ GIG A+ A L + ELARR + RE + SP ++L+ + RE+F+ +F Sbjct: 124 GLRGIGPARTAILVAVVELARRALAEKARERPLVDSPGAVDDYLRLLIGTRPREVFVCLF 183 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 LD++HR++ G+L + V+PREI+R A+ +NA+ALI+AHNHPSG PS AD+ + Sbjct: 184 LDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADRRL 243 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 T + + +D++++DH V+G + SFA+ GWI Sbjct: 244 TRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 278 >UniRef50_UPI0001C34E02 DNA repair protein RadC n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34E02 Length = 243 Score = 223 bits (570), Expect = 3e-57, Method: Composition-based stats. Identities = 78/225 (34%), Positives = 118/225 (52%), Gaps = 3/225 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEML--ENFGSLYGL 58 MK P E+ + G ALTD ELL++ +RTG RG+ L+LA+ +L + GL Sbjct: 19 MKEIPGPDRPYERCERLGPEALTDAELLSIIIRTGARGEHSLSLAQRILALNEPQGILGL 78 Query: 59 LTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESP-LLSPEMTREFLQSQLTG 117 L + + V GIG K QL I EL+RR + ++E PE F + Sbjct: 79 LHLTLPELTAVKGIGRVKGLQLLCIGELSRRIWKTLAQKEIKSFDGPESIAAFYMEDMRH 138 Query: 118 EEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGC 177 E+E ++ ++++ +I LF GT+N REI EA++ +A L L HNHPSG Sbjct: 139 MEQEELHLMMFNTKNMLIRESCLFRGTVNASVASAREIFIEALRYHAVRLALVHNHPSGD 198 Query: 178 AEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS D +T ++ ++ + + + +LDH++IG Y SF ERG I Sbjct: 199 PSPSGEDIRLTRQVAQAGELLGVTLLDHVIIGDNSYFSFKERGII 243 >UniRef50_B5Y6A0 UPF0758 protein COPRO5265_1522 n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=Y1522_COPPD Length = 235 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 77/226 (34%), Positives = 125/226 (55%), Gaps = 4/226 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K PRE +L G L D +LLA+ LRTG + + LA+ +L FG GL Sbjct: 10 IKEWIVSERPRELLLSKGPEHLPDAKLLAIILRTGNKEETAEDLARRLLNTFGGFTGLYR 69 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREF----LQSQLT 116 + E+ + G+G AK AQ+K E+ +R+ EE+ + +PE E+ S L Sbjct: 70 ASVEELLQIKGMGKAKAAQVKAALEIGKRFLQNETVEEARITTPEDAIEYAARYFSSMLM 129 Query: 117 GEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSG 176 E +E F ++ LD ++R I H + G+ V P+EI+++ +A ALIL HNHPSG Sbjct: 130 NEGKEHFWILLLDRKNRPIKHVEISVGSSIQTTVDPKEILKQVSLTSAQALILIHNHPSG 189 Query: 177 CAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS+ D +T+++ ++C+ + ++LDHI++G+ ++VS A I Sbjct: 190 DPSPSREDVAVTKQLKQACELVGAQLLDHIIVGKNQHVSLAREKLI 235 >UniRef50_A5IM26 UPF0758 protein Tpet_1235 n=7 Tax=Thermotogaceae RepID=Y1235_THEP1 Length = 222 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 90/223 (40%), Positives = 134/223 (60%), Gaps = 2/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENF-GSLYGLL 59 MK + L+PRE+M+K G +L+ EL+A+ LRTG +GK VL L+K++LE F GSL L Sbjct: 1 MKRDGGSLLPRERMIKAGPESLSVEELVAIVLRTGKKGKHVLELSKDLLERFDGSLIKLS 60 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 + E+ + V G+G+ K LK EL +R + R L S + Q ++ E Sbjct: 61 NAGLEEIASVEGVGMVKAITLKAALELGKRLHRELERIPEKLDSSVKVYRYCQ-EMVYLE 119 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 REI VI LD++ VI L GT + +HPR++ R AI+ NAS +I+ HNHPSG Sbjct: 120 REIVKVICLDTKLNVIGENTLTVGTSDRSLIHPRDVFRTAIRANASGVIVVHNHPSGDPT 179 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PSK D+LITER+ ++ + + + ++DH+++ R Y SF E G + Sbjct: 180 PSKEDRLITERLKQAGEILGVSLVDHVIVSRRGYFSFREEGEL 222 >UniRef50_B9XSW5 DNA repair protein RadC n=1 Tax=bacterium Ellin514 RepID=B9XSW5_9BACT Length = 244 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 81/227 (35%), Positives = 129/227 (56%), Gaps = 6/227 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K+ PRE++++ G L + EL+A+ LRTG +G +T+A+++L FG+L L Sbjct: 16 IKDLPDAERPRERLVQHGADVLKNSELIAILLRTGLKGVSAITVAEQLLHRFGTLDTLSR 75 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + V GIG K LK LARR E + L +PE + L+ + E Sbjct: 76 ATLADLCKVKGIGRDKAIALKSAFTLARRMAAELKPEGTVLDNPEAIADLLREENRSYEV 135 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F V+ L+++ ++I + GTL+ + +HPRE+ + AI NASA++LAHNHPSG P Sbjct: 136 ENFQVVLLNTRRKLIRVENITQGTLDTLLIHPREVFKSAISANASAIVLAHNHPSGDPTP 195 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGR------GEYVSFAERGW 221 S+AD +T +I++ Q + + +LDHI++GR +Y S E G+ Sbjct: 196 SEADIKVTRDLIRAGQLLKIEILDHIILGRRTNERPKDYASLRELGY 242 >UniRef50_Q2J299 UPF0758 protein RPB_0700 n=15 Tax=Alphaproteobacteria RepID=Y700_RHOP2 Length = 250 Score = 222 bits (566), Expect = 7e-57, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 115/200 (57%) Query: 18 GISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKF 77 G +AL+D ELL L L +DV LAK ++ FGS + + + V G+G A Sbjct: 46 GAAALSDYELLELVLFRALPRRDVKPLAKALIARFGSFAETMQAPEPRLREVSGLGEAAI 105 Query: 78 AQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITH 137 ++K +A A R +++ + L S ++ ++ + +RE F ++FLD ++++I Sbjct: 106 TEIKLVAAAAARVTKGQVKSRTVLSSWSAVIDYCRTTMAFADREQFRILFLDKRNQLIAD 165 Query: 138 RRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQF 197 GT++H V+PREI++ A++++A+A+I+ HNHPSG PS+AD +T+ I+ + Sbjct: 166 ELQQVGTVDHTPVYPREIVKRALELSATAVIMVHNHPSGDPTPSQADIQMTKTIVAIAEP 225 Query: 198 MDLRVLDHIVIGRGEYVSFA 217 + + V DHI++G+ + S Sbjct: 226 LGVAVHDHIIVGKNGHASLK 245 >UniRef50_C5NXB5 DNA repair protein RadC homolog n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXB5_9BACL Length = 257 Score = 222 bits (566), Expect = 8e-57, Method: Composition-based stats. Identities = 76/217 (35%), Positives = 124/217 (57%), Gaps = 1/217 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K S+ PREK K G AL+D E+LA+ LRTGT+ ++V+ L+ +L++ G + L Sbjct: 6 IKEFSEEDRPREKFKKLGALALSDKEILAILLRTGTKNQNVIELSDIILKDIGGITKLRD 65 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + GIG K + E ARR Y + + SP+ +L+S L + Sbjct: 66 VTLTELMKHKGIGQEKAIHILANIEFARRIYATNVL-DVKCDSPQSIANYLKSSLENLTQ 124 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E+F+V+ +D++ ++I R +F G+L+ VHPRE+ + AIK +AS+++ HNHPSG A P Sbjct: 125 EVFVVLDIDTKGKIIEKREVFKGSLSMSVVHPREVFKLAIKNSASSIVCVHNHPSGDATP 184 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFA 217 S D T +++ + + + +LDHIV+ + YVS Sbjct: 185 SIEDIKTTINLMEVGEIVGIEMLDHIVVAKKGYVSIR 221 >UniRef50_Q7MVX9 UPF0758 protein PG_0894 n=24 Tax=Bacteroidales RepID=Y894_PORGI Length = 227 Score = 222 bits (565), Expect = 9e-57, Method: Composition-based stats. Identities = 71/225 (31%), Positives = 115/225 (51%), Gaps = 3/225 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLL 59 +K + PREKM++ G LTD ELLA+ + +G + + LA+E+L SL L Sbjct: 3 IKQLHESDRPREKMIRLGARCLTDAELLAILIGSGNDRQTAIQLAQEILAKMDNSLPRLA 62 Query: 60 TSEYEQFS-GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGE 118 + ++ + G+G AK + EL+RR + M + M + LT Sbjct: 63 KCDIQELTGSFRGMGPAKAVTVMAAMELSRRIPSQEMPRRESITDSRMAYRTISPFLTDL 122 Query: 119 EREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCA 178 +E V+ L+ ++I+ L G ++ R I+ +A+ ASA+ILAHNHPSG Sbjct: 123 PQEEMWVLLLNQSGKIISMENLSRGGVSETSADVRLIMHKAVSHLASAIILAHNHPSGTV 182 Query: 179 EPSKADKLITERIIKSCQFMDLRVLDHIVIGRGE-YVSFAERGWI 222 PS+ D +T+R+ K+ + R+ DH++IG Y SFA+ G + Sbjct: 183 RPSEQDIQLTQRVQKAATLLGFRLNDHLIIGDDGAYFSFADEGLL 227 >UniRef50_B5YDI9 DNA repair protein n=2 Tax=Dictyoglomus RepID=B5YDI9_DICT6 Length = 228 Score = 222 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 74/223 (33%), Positives = 127/223 (56%), Gaps = 1/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K+ PRE++L +G AL+DVELLA+ LRTG + V LA+ ++ +FGSL + Sbjct: 6 IKDFPTSERPRERLLNYGEKALSDVELLAIILRTGDKKYSVYELAQNLIIDFGSLRRIAE 65 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMRE-ESPLLSPEMTREFLQSQLTGEE 119 + GIGV K Q+K EL RR ++ + + +P + + + Sbjct: 66 VGIGELIKYPGIGVTKAIQIKASIELGRRIFSEKKSYFGESISNPYDAFLIFKEDMFDLK 125 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 E I++D +++ ++ R + G LN V PR+I + A++ N++ +ILAHNHPSG Sbjct: 126 EEHLFCIYMDIKNKCLSKRLIAKGDLNIVYASPRDIFKYALQENSAKIILAHNHPSGDLT 185 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS+ D + T+R+I++ + + + VLDH++I +Y+S E+ +I Sbjct: 186 PSEDDVIFTKRLIEAGKILGIEVLDHLIIHNEDYLSLKEKNFI 228 >UniRef50_C4ZA49 DNA repair protein RadC n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZA49_EUBR3 Length = 229 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 78/223 (34%), Positives = 119/223 (53%), Gaps = 1/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGS-LYGLL 59 +KN P EK L G S L+D +LLA+ ++TGTR K V+ +A+++L S L L Sbjct: 7 IKNLPASERPYEKFLSLGASGLSDADLLAIIIKTGTRDKTVIDIAQDILSGKHSNLLNLY 66 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 YE+ + GIG K QLK IAEL+ R + + + +P+ ++ Q+ Sbjct: 67 EMSYEELLSIPGIGQIKAIQLKAIAELSLRIAKTKKVQSIRMNNPQTIADYYMEQMRHLT 126 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 E+ + + D + R + + + G+L+ V IIR A+ NAS L+L HNHPSG Sbjct: 127 NEVVICAYFDVKSRFLGDKFISKGSLSSSVVDIGSIIRTALDKNASKLVLLHNHPSGDCT 186 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS+ D +T+R+I+ + + DHI+IG EY SF E I Sbjct: 187 PSRNDIAVTDRLIEGSGIFSIELCDHIIIGDNEYYSFYENKLI 229 >UniRef50_C6BYC2 DNA repair protein RadC n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BYC2_DESAD Length = 225 Score = 220 bits (562), Expect = 2e-56, Method: Composition-based stats. Identities = 70/225 (31%), Positives = 114/225 (50%), Gaps = 3/225 (1%) Query: 1 MKNNSQLLMPREKM-LKFGISA--LTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYG 57 MK+ R+++ K G + L D E+L L L +D LAKE+L FG L G Sbjct: 1 MKDKPHYYGHRQRLKEKLGKDSTSLADYEILELLLGQVLPRRDTKPLAKELLAEFGGLSG 60 Query: 58 LLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTG 117 + + EQ GIG + E R M + + SP++ + +++ Sbjct: 61 VFRAPEEQLKKFKGIGPGVLIFFTLMREFWTRIAEEPMNGKEAISSPDVVYKAAMARIGN 120 Query: 118 EEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGC 177 +E F + ++++++VI RL GT++ V+PRE++ A++ NAS +IL HNHP G Sbjct: 121 LSKEEFWIALVNNRNKVICWERLSEGTVDKTAVYPREVVALALRHNASGVILTHNHPGGD 180 Query: 178 AEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS D T I CQ M++R+LDH+++ + SF E G++ Sbjct: 181 PSPSPEDTERTMEIAALCQDMEIRLLDHVIVTADRFHSFKEAGYL 225 >UniRef50_C0Q9Z9 RadC3 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9Z9_DESAH Length = 279 Score = 220 bits (560), Expect = 4e-56, Method: Composition-based stats. Identities = 75/220 (34%), Positives = 120/220 (54%) Query: 3 NNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSE 62 N +++ L GIS D E++ L L T KD AK +L+ F +L G+ + Sbjct: 48 NTGHRSRLKQRFLANGISGFLDYEVIELLLTLNTPRKDCKPSAKALLDRFKTLQGVFEAS 107 Query: 63 YEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREI 122 E+ V+G+G + +K I ++ RY R+R ++ L + FL + RE+ Sbjct: 108 VEELCRVNGVGPSNVLGIKLIKAVSDRYLEQRIRSKTVLKNSHDLCAFLGHAIGHRPREV 167 Query: 123 FMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSK 182 F+ IFLD+++RV+ LF G+L+ V+PRE+I +A++ A+ALI AHNHPSG PS Sbjct: 168 FVGIFLDAKNRVLASEILFEGSLSSSAVYPREVIAKALEHRAAALIFAHNHPSGETSPSP 227 Query: 183 ADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 D IT R+ + + V +H++ G + SFA++G I Sbjct: 228 EDLAITRRLFFALAHAGITVHEHLITGGERFYSFADQGII 267 >UniRef50_A1UT15 DNA repair protein, RadC family n=3 Tax=Bartonella RepID=A1UT15_BARBK Length = 265 Score = 220 bits (560), Expect = 4e-56, Method: Composition-based stats. Identities = 66/217 (30%), Positives = 117/217 (53%) Query: 6 QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQ 65 R++ L +A+ D E L L L D +AK+++E FGSL +L ++ + Sbjct: 49 HRERLRKRFLDTKGNAIEDYEYLELLLFRTIPRADTKPIAKKLIERFGSLADVLGADIHR 108 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMV 125 + G G A LK I+ +A R+ ++ + S + + ++ + E RE F + Sbjct: 109 LQEIEGCGPASAIDLKIISAVAGRFARAQLSKRDIFSSWDKVLAYCKAVMAHETREQFRI 168 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 +FLD +H +++ +GT++ V+PRE++ A++++AS +IL HNHPSG A PS+ D Sbjct: 169 LFLDKKHGLLSDEVQQTGTIDRTPVYPREVVSRALELSASGIILVHNHPSGDASPSQEDI 228 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +T R+ +D+ + DH++I R +Y+SF I Sbjct: 229 SMTYRLKDVANALDITLHDHLIIARNDYISFKALKLI 265 >UniRef50_Q1RK76 DNA repair protein RadC n=11 Tax=Rickettsia RepID=Q1RK76_RICBR Length = 249 Score = 220 bits (560), Expect = 4e-56, Method: Composition-based stats. Identities = 68/228 (29%), Positives = 115/228 (50%), Gaps = 6/228 (2%) Query: 1 MKNNS------QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGS 54 +K +E+ + G + +D ELL L L + KDV LAK++LENF S Sbjct: 22 IKEEPDPHYIGHRKRVKERFVTSGAANFSDYELLELMLFSSIPRKDVKPLAKKLLENFNS 81 Query: 55 LYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQ 114 + L+ + E+ + G + + EL R ++ ++ + S ++L+ Sbjct: 82 ITDLINIDKERLLSISGTNENLYINFAIVRELINRALKQKIINKNIIASWGSLIDYLKVN 141 Query: 115 LTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHP 174 + E F V+FL+ ++ +I L GT++ V+PREII+ A+ AS +IL HNHP Sbjct: 142 MGNMRLEQFRVLFLNKKNILIADEVLSQGTIDQAAVYPREIIKRALFNEASNIILVHNHP 201 Query: 175 SGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 SG +PSKA +T I+ C+ +++ V DH++I +Y SF + Sbjct: 202 SGSPDPSKAGIDMTNIIVDMCKTINIIVHDHVIISNNKYFSFKSNMLL 249 >UniRef50_C0BG63 DNA repair protein RadC n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BG63_9BACT Length = 232 Score = 219 bits (559), Expect = 5e-56, Method: Composition-based stats. Identities = 67/223 (30%), Positives = 116/223 (52%), Gaps = 1/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGS-LYGLL 59 +K+ PREK+ G S L++ EL A+ + G+ + + L K +L + + L Sbjct: 10 IKDWDVSDRPREKLKSQGASYLSNAELFAVLIGYGSSSESAVGLMKRILLSINNDLQKFD 69 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 E+ GIG K +LK + EL++R+ + + + L S ++ E + L Sbjct: 70 QLPIERLVEFKGIGEVKAIKLKAVVELSKRFQKQQPDKTTVLNSSKIVYESIYMDLDTLP 129 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 E F +++L+ +R++ RL G + V R + A ++ A+ LILAHNHPSG Sbjct: 130 HEEFWILYLNQSNRLLEKYRLSKGGITQTTVDLRLAFKRAFEVGATGLILAHNHPSGGLT 189 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS +D+ IT + + +DLR+LDH+++ + Y SFA+ G + Sbjct: 190 PSSSDEQITRKFKLAAASVDLRILDHLIVSKKGYFSFADEGLL 232 >UniRef50_C4V569 DNA repair protein RadC n=2 Tax=Selenomonas RepID=C4V569_9FIRM Length = 225 Score = 218 bits (557), Expect = 8e-56, Method: Composition-based stats. Identities = 77/224 (34%), Positives = 121/224 (54%), Gaps = 3/224 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENF--GSLYGL 58 + S +PRE++L G + L+D ELLA+ LRTG G++VL LA+ + F L + Sbjct: 3 LSELSPGELPRERLLAHGAAVLSDAELLAVLLRTGRAGENVLDLARGIAARFREEGLAAI 62 Query: 59 LTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGE 118 L +F+ + GIG AK A + EL RR Y R + L ++ E Sbjct: 63 LRMPAAEFARIPGIGSAKAATVLAALELGRRAYAG-TRGMPRMNEAADVAALLSARCQAE 121 Query: 119 EREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCA 178 RE F V+ L +++ V+ + +GTL + VHPRE+ AI+ +A+ +I+AHNHPSG Sbjct: 122 RREHFFVLPLSAKNEVLMIADVSTGTLTNTLVHPREVFEPAIRCSAAHIIIAHNHPSGDP 181 Query: 179 EPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS D +T + ++ + + V DH+++ R + SFAE G + Sbjct: 182 APSAEDHRLTRSLHEAGALLGIPVADHVIVARDGFFSFAEAGLL 225 >UniRef50_B2V8J4 DNA repair protein RadC n=5 Tax=Aquificales RepID=B2V8J4_SULSY Length = 229 Score = 218 bits (557), Expect = 8e-56, Method: Composition-based stats. Identities = 75/222 (33%), Positives = 126/222 (56%), Gaps = 4/222 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K + ++PREK LK G S L+D ELLA+ L +GT+G +V+ LA+++L S L Sbjct: 12 IKELPKDMLPREKALKGGFSFLSDEELLAISLGSGTKGINVIGLAQKILNG-KSFKDLKD 70 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + GIG AK Q+ I E+A+R E+ + S +L+ L+ E + Sbjct: 71 ITLDDLKKIKGIGEAKALQILAIIEIAKRM--DDHAEKIKITSVSDAFNYLK-FLSKETQ 127 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E + ++L+S + +I + G+LN V V PR+I+ AIK N + +I++HNHP+ P Sbjct: 128 EHMVALYLNSSNHLIAQEVIAKGSLNVVRVLPRDILYYAIKHNCNGIIISHNHPNNDPTP 187 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S+ D T+++ + +LDHI++G+ ++ SFA+ G I Sbjct: 188 SQEDIEFTKKLQTLANELGFDLLDHIIVGKKDFYSFAKAGLI 229 >UniRef50_C4FYP9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FYP9_ABIDE Length = 240 Score = 218 bits (557), Expect = 9e-56, Method: Composition-based stats. Identities = 78/222 (35%), Positives = 128/222 (57%), Gaps = 1/222 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLL 59 +++ + P EK K GI+ L+D ELLAL LRTGT+ + + L +++LE+ G SL GL Sbjct: 6 IEDLPEDARPFEKYRKQGITMLSDAELLALVLRTGTKNINCMELCRKVLESGGGSLAGLY 65 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 ++ + G+G K ++ I ELARR R + PL + + ++ + Sbjct: 66 GKTEKELCNIQGVGPVKAVEIICICELARRIARTRHSYDEPLDTAAKISKRYMEEMRHFK 125 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 E +++ LD + R+I + GT+N + PRE+ +A+K A L+L HNHPSG Sbjct: 126 EEHVVLLLLDIKCRLIKELTISIGTINQSFLRPREVFIQALKYEAVNLVLIHNHPSGDPT 185 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 PSKAD ++T++I++ + + + ++DHI+IG YVSF E+G Sbjct: 186 PSKADIIVTDKILEVSELVGIPLVDHIIIGDCCYVSFREKGL 227 >UniRef50_A7HJG0 DNA repair protein RadC n=3 Tax=Thermotogaceae RepID=A7HJG0_FERNB Length = 225 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 83/218 (38%), Positives = 124/218 (56%), Gaps = 4/218 (1%) Query: 4 NSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLLTSE 62 PREK+LK G AL EL+A+ LRTGT GKDVL +KE+ FG SLY + + Sbjct: 1 MPIEYGPREKLLKEGSEALETSELIAILLRTGTNGKDVLETSKELFNKFGGSLYKMSRAT 60 Query: 63 YEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMRE-ESPLLSPEMTREFLQSQLTGEERE 121 ++ F + G+G K L ELA+R + L SPE ++ + +E Sbjct: 61 FDDFKSIKGLGDVKIVTLMAALELAKRLVKEETVILDPKLTSPENVFQYCI-DMQSYPQE 119 Query: 122 IFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPS 181 I VIFLD++ +VI + + GT+N HPR+I REAI +++ +ILAHNHPSG PS Sbjct: 120 IVRVIFLDTKLKVIGSKDVSKGTINSSMAHPRDIFREAILRSSTGIILAHNHPSGDPTPS 179 Query: 182 KADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAER 219 K D +T++I K+ + + + + DH++IG + S ++ Sbjct: 180 KDDIELTKKIKKAGELLGINLHDHVIIG-QTFYSLRQK 216 >UniRef50_Q5WTW4 UPF0758 protein lpl2409 n=6 Tax=Legionella RepID=Y2409_LEGPL Length = 227 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 90/212 (42%), Positives = 138/212 (65%), Gaps = 1/212 (0%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 REK+L G+ +L+D+ELLA+F+ +G K L LA E+ ++ G+L +L ++ + F +H Sbjct: 13 REKLLTNGVHSLSDIELLAVFISSGNNKKSCLQLAYELTKHLGNLRNILNADLQSFKSIH 72 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+G ++AQL+ E+ R + +++E L + + T FL+ +L + E F +FLD+ Sbjct: 73 GLGEVRYAQLQAAKEICHRSDFIDLQKEIRLSNTQQTYAFLKKRLRDYKNETFAALFLDN 132 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 QHR+I + LFSGT+N V+PR I+ +++NA+ALILAHNHPSG ++ S+ D ITER Sbjct: 133 QHRIIAYEELFSGTINTATVYPRPIVERVLQLNAAALILAHNHPSGLSDASQQDLAITER 192 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVS-FAERGW 221 I + +D R+LDHIVIG E S FAE W Sbjct: 193 IRDALDLVDARLLDHIVIGDNEVYSIFAENKW 224 >UniRef50_UPI0001BC32AB DNA repair protein RadC n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC32AB Length = 227 Score = 218 bits (555), Expect = 1e-55, Method: Composition-based stats. Identities = 68/215 (31%), Positives = 120/215 (55%), Gaps = 2/215 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEM--LENFGSLYGLLTSEYEQFS 67 P EK ++G ++LTDVELLA+ +R+GT+ K+ + +A+E+ L + GL + Sbjct: 13 PYEKCERYGAASLTDVELLAVIIRSGTKDKNCIQVAEELFKLSGNMGILGLKHLTQRDYC 72 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 + GIG K + I EL+ R M + + + + ++ +L E E FMV+ Sbjct: 73 SIDGIGKVKSIMFQCIGELSSRISKATMAKRTVFNTSKDAADYCMEELRHLEYECFMVLL 132 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 L+++ +I + L GT+N+ + RE+ R A+ A +I+ HNHPSG PS+ D L Sbjct: 133 LNTKCELINEKILSMGTVNYTCITSREVYRYALSKGAVYIIVVHNHPSGDPTPSREDSLC 192 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 T+++ ++ + + + ++DHI+IG Y+S E+ I Sbjct: 193 TKKLKEAGELVGIPLIDHIIIGDNRYISLKEQDMI 227 >UniRef50_C2BCF6 DNA repair protein RadC n=2 Tax=Anaerococcus RepID=C2BCF6_9FIRM Length = 226 Score = 218 bits (555), Expect = 1e-55, Method: Composition-based stats. Identities = 83/223 (37%), Positives = 139/223 (62%), Gaps = 2/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K+ PREK++K G ++L++ ELLA+ + TGT K+ + LA+E+L F S LL Sbjct: 5 IKDMKLTDRPREKLIKLGHASLSEKELLAIIISTGTDKKNAIELAEEILATF-SEEALLE 63 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRM-REESPLLSPEMTREFLQSQLTGEE 119 E E+ + ++GI AK +++ + +R + +++ + S E EF++ ++ ++ Sbjct: 64 IEVEELTKINGIKEAKASKIVASLQFGKRIKEKILNKKKYQINSNEEAYEFIKDTISLKD 123 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 RE F I L++++ VI+ + G L+ V+PRE+ + AIK +A ++ILAHNHPSG Sbjct: 124 REYFYTILLNNKNEVISKELISIGDLSSSIVNPREVFKPAIKKSAKSMILAHNHPSGNPS 183 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PSKAD LIT R+I + + +D+ VLDH++IG G YVS + +I Sbjct: 184 PSKADLLITHRLIDAGEILDITVLDHLIIGHGTYVSLKKDNYI 226 >UniRef50_C8VVH2 DNA repair protein RadC n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VVH2_DESAS Length = 227 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 73/213 (34%), Positives = 117/213 (54%), Gaps = 6/213 (2%) Query: 9 MPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSG 68 RE+ L +G S L D EL+ L L A ++ + GL+ EQ + Sbjct: 20 KIRERGLNYGTSVLNDAELVMTLLGIN------LEKAMNLINIINGIRGLMDVSVEQLAE 73 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 V G+G +K LK E+ +R + E + +P+ ++ ++ +RE F + L Sbjct: 74 VKGVGNSKALALKAAVEIGQRIAKTKAMECPSVKTPDDAVNYVMEEMRYMDREHFKALLL 133 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 ++++RVI+ + GTLN VHPRE+ + AIK +A+A+IL HNHPSG PS+ D +T Sbjct: 134 NTKNRVISLEAISVGTLNSSNVHPRELFKVAIKRSAAAIILIHNHPSGDPTPSREDIDVT 193 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 ER+ ++ + + + VLDHIVIG G++VS +G Sbjct: 194 ERLGEAGKIVGIDVLDHIVIGDGKFVSLKAKGL 226 >UniRef50_B2URH1 DNA repair protein RadC n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2URH1_AKKM8 Length = 246 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 81/223 (36%), Positives = 132/223 (59%), Gaps = 8/223 (3%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 ++ +PREK+L+ G +L++ ELLA+FLR G +GK+VL ++ +++++ GSL L Sbjct: 6 LQELPSQSLPREKLLRQGRHSLSNAELLAIFLRMGIKGKNVLDMSSDLIQSAGSLDALAH 65 Query: 61 SEYEQFSGVH-GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 E + + + GIG+AK A L EL R + P+ +PE ++L + + +E Sbjct: 66 MEAAEIANICKGIGMAKAATLSAAFELGARALRETL-SRQPIQTPEDVYDYLTTAMRWKE 124 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 +E +V+ LD++ R+I + SGTLN HPR+I+R + NA ILAHNHPSG Sbjct: 125 KETVLVLLLDTKCRLIKPVEISSGTLNESIAHPRDILRPTVIHNAYGFILAHNHPSGNPA 184 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGR------GEYVSF 216 PS+ D L+TER+ + + + +R LDH++IG+ Y S+ Sbjct: 185 PSRTDDLLTERVRECSKLLGVRFLDHVIIGKPTETTNKNYYSY 227 >UniRef50_Q0BRK0 DNA repair protein radC n=5 Tax=Alphaproteobacteria RepID=Q0BRK0_GRABC Length = 271 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 68/214 (31%), Positives = 122/214 (57%) Query: 9 MPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSG 68 R+++L G AL D E+L + L +D LAK++L +FGS ++++ + + Sbjct: 58 RMRQRLLTHGPEALADYEMLEMLLFLALPRRDTKPLAKDLLNHFGSFAAVISASPRELTT 117 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 + G+G A A L + + R + L + E +L + L E+ E F V+FL Sbjct: 118 IKGVGEAGAAALALVRAASLRLLRADAVAQPVLNNWERLIAYLNASLAREKNEQFRVLFL 177 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 D+++++I L GT+NH V+PRE+++ A++++A+ALI+ HNHPSG PS D +T Sbjct: 178 DNRNQLIADEILAHGTVNHAPVYPREVVKRALELHATALIVVHNHPSGDPTPSAEDIRMT 237 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + ++ + + L + DH++IGR + SF ++G + Sbjct: 238 RELREAGRLLSLDLHDHVIIGRHGWSSFRKQGLL 271 >UniRef50_D2RM81 DNA repair protein RadC n=2 Tax=Acidaminococcus RepID=D2RM81_ACIFE Length = 220 Score = 217 bits (552), Expect = 3e-55, Method: Composition-based stats. Identities = 71/220 (32%), Positives = 112/220 (50%), Gaps = 1/220 (0%) Query: 4 NSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT-SE 62 PRE++L G ALT ELLA+ + TG + L +A+E+ + L + Sbjct: 1 MLPEERPRERLLAKGPEALTITELLAILIGTGRKDHSALDIARELTGDLLKDARLARTQD 60 Query: 63 YEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREI 122 + + + GIG AK + EL RR R + PE + +L E E Sbjct: 61 VRELTRISGIGPAKATVILAALELGRRLAGAGTRPFRTIHCPEDGAMLVMPRLRYENHEH 120 Query: 123 FMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSK 182 F+V+ L+S+ +VI + G+LN VHPRE A+ +A+A++ HNHPSG PS+ Sbjct: 121 FLVVLLNSKGKVIGIEPVSEGSLNASVVHPREAFAPALLHHAAAILAVHNHPSGDPTPSR 180 Query: 183 ADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 D+ +T + + + M + ++DH++IG G Y SF E G + Sbjct: 181 EDRELTRTLWDTGKVMGIPLVDHLIIGDGVYYSFKEHGLL 220 >UniRef50_B5YL92 DNA repair protein RadC n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YL92_THEYD Length = 222 Score = 216 bits (551), Expect = 4e-55, Method: Composition-based stats. Identities = 77/222 (34%), Positives = 126/222 (56%), Gaps = 6/222 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K+ PREKM K G AL+D+ELLA+ L +G +GKDV +A+++L+ Sbjct: 4 IKSIPNFDRPREKMEKKGAKALSDLELLAVLLGSGIKGKDVFEVARDILKLTQ--EDFNN 61 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + G+G+AK Q+ E ++R+ ++E + + + + +L +++ Sbjct: 62 LNLDNLKNIEGVGLAKACQIMAAIEFSKRFL---LKEGIKIKNVDDVLKI-TEELKDKKQ 117 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+ + LD +I R +F GTLNH VHPREI +AI A+ +I HNHPSG +EP Sbjct: 118 EYFLSLTLDGASNLIQKRTVFIGTLNHSIVHPREIFADAISDRAAGIIFVHNHPSGDSEP 177 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 SK D IT+R+++ + + + V+DHI+I + Y SF G + Sbjct: 178 SKQDIEITKRLVEIGKMLGIEVIDHIIISKNGYYSFQAEGML 219 >UniRef50_D1N9M0 DNA repair protein RadC n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9M0_9BACT Length = 227 Score = 216 bits (550), Expect = 5e-55, Method: Composition-based stats. Identities = 75/220 (34%), Positives = 120/220 (54%), Gaps = 1/220 (0%) Query: 3 NNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSE 62 N+ RE+ L+ G+ L D E + L L DV LAK++LE++GSL LL + Sbjct: 9 NSGHRKRLRERFLRAGLEGLQDYEAIELVLTFAIPRHDVKPLAKQLLEHYGSLEKLLDAT 68 Query: 63 YEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREI 122 + HG+G A L +L +Y + R+ L + FL+ +L G ++E Sbjct: 69 PAELLDQHGLGEAAVTLLALHKQLCTKYLEQKARDVDVLDNTTKIVNFLRMKLGGGKKET 128 Query: 123 FMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSK 182 FMV+FL++Q+ ++ + GT++ V+ RE++ +AI A+A+ILAHNHP+G EPS Sbjct: 129 FMVLFLNAQNHLLCFDVI-PGTVDRATVYAREVLEKAINTKATAVILAHNHPTGICEPSP 187 Query: 183 ADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 AD +T I + Q + + + DHI++ Y SFA R + Sbjct: 188 ADIKLTNTIRQVLQPVGILLHDHIIVAPSCYFSFASRRML 227 >UniRef50_O67541 UPF0758 protein aq_1610 n=2 Tax=Aquificaceae RepID=Y1610_AQUAE Length = 231 Score = 216 bits (550), Expect = 5e-55, Method: Composition-based stats. Identities = 77/222 (34%), Positives = 131/222 (59%), Gaps = 5/222 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K + L PREK+LK G L+D ELLA+ L +G++G DVL+L+KE+++ L Sbjct: 15 LKEIPEELRPREKLLKLGPENLSDEELLAVILGSGSKGADVLSLSKELIK--MGWEELEK 72 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 E+ V G+G+ K Q+K + EL++R+ + + +P+ EFL+ + E R Sbjct: 73 KSVEELLKVRGLGLVKALQVKALVELSKRFKGGK--SRISIRNPQEAFEFLKDKF-DERR 129 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E + ++LD +R++ + G +N V P++I+ +A+K++A+ +I+AHNHP G P Sbjct: 130 ESLIALYLDLSNRLLDWEVVAIGNVNTVFSKPKDILFKAVKLSANGIIIAHNHPQGEPSP 189 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S D TER+ K+C+ + +LDH+++ G Y SF E G + Sbjct: 190 SNEDLNFTERLKKACELLGFELLDHLILSEGRYFSFREEGVL 231 >UniRef50_A2RLC4 UPF0758 protein llmg_1515 n=4 Tax=Lactococcus lactis RepID=Y1515_LACLM Length = 227 Score = 216 bits (550), Expect = 6e-55, Method: Composition-based stats. Identities = 78/219 (35%), Positives = 124/219 (56%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K S + PRE++ G L+DVELLA+ LRTG + L LA E+L++FG+L Sbjct: 4 LKEKSYPMQPRERLELLGEEYLSDVELLAILLRTGRKKYSSLNLALELLQHFGTLDNFRK 63 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + + GIG K +L+ + EL +R + +LS + L ++ E+ Sbjct: 64 ASISELKEISGIGQTKAIELRAMIELGKRIQTTTRKRYGQVLSSKEYGMSLAFEMQNFEQ 123 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E +LD Q+++I + +F G NH PREI+ A+K + L++AHNHPSG +P Sbjct: 124 EHLTATYLDGQNQIIEKKTIFIGAFNHATASPREILYHAVKNLSVGLLVAHNHPSGNLQP 183 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAER 219 S+ADK+ T++I +C + + +DHI++G G Y SF ER Sbjct: 184 SQADKIFTKKIKNACDNIGINFIDHIIVGAGNYYSFRER 222 >UniRef50_UPI000196B4AA hypothetical protein CATMIT_00107 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B4AA Length = 226 Score = 215 bits (549), Expect = 6e-55, Method: Composition-based stats. Identities = 76/219 (34%), Positives = 120/219 (54%), Gaps = 1/219 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K Q PREK L GI +LTD ELLAL LRTG + + VL L+ +L + G T Sbjct: 2 IKGLEQSSQPREKALLNGIESLTDEELLALLLRTGNKEQSVLDLSSTILREIHGMNGFHT 61 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + GI AK + E ++R N+ +P L+++++ + Sbjct: 62 ITFAKLLSFKGINKAKAIGIMAALEFSKRI-NIHTNINEVYDNPTKVFYHLETKMSHLSQ 120 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+++ LD+ +R+I + LF G++N V REI REA+ N ++I HNHPSG A P Sbjct: 121 EHFLIMILDNHNRLIAEKTLFIGSVNMSIVSAREIFREALAFNGVSIICVHNHPSGDAHP 180 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAER 219 S D +T++++ + M++ ++DHI+IGR +Y SF Sbjct: 181 SSEDISMTQKLVDLGKMMNVDIVDHIIIGRNQYYSFKAE 219 >UniRef50_B0S3Y4 UPF0758 protein FMG_0357 n=2 Tax=Finegoldia magna RepID=Y357_FINM2 Length = 223 Score = 215 bits (548), Expect = 8e-55, Method: Composition-based stats. Identities = 70/217 (32%), Positives = 120/217 (55%), Gaps = 1/217 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K ++ L PREKM GIS+++D EL+ + L+TG + + V L+K +++ Sbjct: 3 VKEMNESLRPREKMKINGISSMSDEELMQIILKTGIKEEGVEILSKRVIDYINE-NDYKD 61 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 E+ + GIG+AK + E+ RR + + L P+ E +++ + Sbjct: 62 LCVEELMKIKGIGMAKATSILAGIEIGRRLSLRKAMDSFSLNDPDSVAEIFCNEIGSCDV 121 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F + LD+++R+I+ + GT+N VHPRE+ + AIK A+++IL HNHPSG P Sbjct: 122 ENFYALLLDTKNRIISKELISKGTINQSIVHPREVFKSAIKKGANSIILVHNHPSGSLIP 181 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFA 217 S AD +T+R+ K + ++VLDHI++ + +S Sbjct: 182 SNADIEVTKRLDKVGDLVGIQVLDHIIVSSNDSLSMR 218 >UniRef50_C2MB02 DNA repair protein RadC n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MB02_9PORP Length = 267 Score = 215 bits (547), Expect = 1e-54, Method: Composition-based stats. Identities = 73/243 (30%), Positives = 118/243 (48%), Gaps = 21/243 (8%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGS-LYGLL 59 +K S+ PREK+L+ G L+D ELLA+F+ +GT L LAK+++ + L LL Sbjct: 22 IKQWSEEDRPREKLLRLGARHLSDAELLAIFINSGTEKDSALDLAKQIMTGLDNDLGQLL 81 Query: 60 TSEYEQF---------SGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREF 110 ++ G+G A+ + EL RR + +P+ Sbjct: 82 EIDHAYLTGCEPGEKKKRFAGLGDARACTILAAIELGRRLRDTPPPRRTPITCSLDAYRV 141 Query: 111 LQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILA 170 L+ L + E ++LD+ RVI + SG ++H R I+ AI ASA+ILA Sbjct: 142 LRRHLESLDHEELRCLYLDASGRVIKDELVSSGGVSHAVADLRLILAPAITHYASAIILA 201 Query: 171 HNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIG-----------RGEYVSFAER 219 HNHP+G +PS D +T+R+ + ++R+ DH+++G R Y+SFA+ Sbjct: 202 HNHPTGHLQPSAEDMDLTKRVKQVASVCNIRLNDHLILGRYHASVTSDGERSHYLSFADN 261 Query: 220 GWI 222 G + Sbjct: 262 GLL 264 >UniRef50_C2KVW9 Possible DNA repair protein RadC n=1 Tax=Oribacterium sinus F0268 RepID=C2KVW9_9FIRM Length = 229 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 84/220 (38%), Positives = 130/220 (59%), Gaps = 4/220 (1%) Query: 7 LLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLE---NFGSLYGLLTSEY 63 +PREK ++ G+SALTD ELLA+ LRTGTR + VL LA+++L + L GL+ Sbjct: 10 QELPREKAIRLGVSALTDEELLAVILRTGTREESVLALAEKVLHLSPVYDGLVGLMQYSL 69 Query: 64 EQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESP-LLSPEMTREFLQSQLTGEEREI 122 E + G+G K +L+ I ELA+R +N ++REE SP ++ + +L E Sbjct: 70 EDLQAIKGVGETKALELQVIGELAKRIWNRKIREEVQSFRSPGSVLQYFKEELRHLSYEE 129 Query: 123 FMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSK 182 V+FLD++ +++ L G+ N + REI EA++ + IL HNHPSG PS+ Sbjct: 130 VHVLFLDTKAQLLKDFLLSKGSSNASILSGREIFMEALRAASVCFILVHNHPSGDPHPSR 189 Query: 183 ADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 D+ TE I K+ +++ + ++DHI+IG +Y SF E+G I Sbjct: 190 EDERATEEIYKAGEYLGIHLMDHIIIGDNQYYSFKEQGKI 229 >UniRef50_B9MPC4 DNA repair protein RadC n=2 Tax=Clostridia RepID=B9MPC4_ANATD Length = 232 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 66/217 (30%), Positives = 115/217 (52%) Query: 6 QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQ 65 + + ++ G+ D ++L L L KD +A ++ FGS+ + + ++ Sbjct: 11 HRERLKRRFIEQGLDGFEDHQVLELLLFFSIPRKDTNEIAHRLISTFGSISNVFEAHPKE 70 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMV 125 V G+G + I++++RRY + R+ L + E E+++S G + E+F V Sbjct: 71 LQKVKGVGENSAILISLISQISRRYLADKNRKTFQLRNVEAAAEYIKSLFVGRKNEVFYV 130 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 I LD+Q VI LF GT+ V+PR+++ I+ NAS++ILAHNHP G PS D Sbjct: 131 ICLDTQLNVIYSVPLFEGTVKEAVVYPRKVVECVIRYNASSVILAHNHPGGSVRPSMDDI 190 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 T++I+ + + + V DH ++ + EY SFA+ G + Sbjct: 191 KTTQKIVNALSTIGVAVNDHFIVAKDEYYSFAQNGML 227 >UniRef50_C0GMV6 DNA repair protein RadC n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GMV6_9DELT Length = 226 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 66/223 (29%), Positives = 106/223 (47%), Gaps = 3/223 (1%) Query: 3 NNSQLLMPREKM---LKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLL 59 R+++ L S+L D E+L L L KD LAK +L + + LL Sbjct: 4 QKPHYTGHRQRLKKRLDNDPSSLQDYEILELVLGYALPRKDTKPLAKALLNRYPTFKDLL 63 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 + + GIG + E R + S L SPE +S+L + Sbjct: 64 AARPGDLQAIDGIGPGIITFFRLWGEFWARTDRSGLSTRSTLDSPEKVARLARSRLQFKS 123 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 E F I +D+++R+I ++ GT++ V PREI+ A++ AS +IL HNHP G Sbjct: 124 IEEFWAIMVDNKNRLIDFEKMSRGTVDQAPVFPREILTVALEKRASGVILLHNHPGGDPH 183 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS D+ +T +I + + +R+LDH++I + SF E G++ Sbjct: 184 PSFQDRELTRKIREVSTALGVRLLDHVIISEDSFFSFQEHGFL 226 >UniRef50_C9LLN8 DNA repair protein RadC n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLN8_9FIRM Length = 227 Score = 213 bits (544), Expect = 3e-54, Method: Composition-based stats. Identities = 70/226 (30%), Positives = 121/226 (53%), Gaps = 5/226 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG---SLYG 57 +K PRE+ K + V+L+A+ LRTG G V+ +A+E++E + G Sbjct: 3 IKEMRSEDKPRERFAKA-PDTASMVDLVAILLRTGRHGCSVMDMAQEVVEQIRLSTDVNG 61 Query: 58 LLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLS-PEMTREFLQSQLT 116 ++ V G+G K + EL RR +++ S PE + +L Sbjct: 62 FDNLDWRDLISVKGVGQDKAITVCAAVELGRRLAQFHNKKQLENFSFPEAVASYFMEKLR 121 Query: 117 GEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSG 176 E++E F+V FL++++R++ ++ + G+L+ V +E +R A++ A +IL HNHPSG Sbjct: 122 HEDQEHFIVCFLNTKNRLLGYKEICVGSLDAAPVDIKEAMRWALRFKAHGMILVHNHPSG 181 Query: 177 CAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 EPS AD +T + ++ F D+R+LDH++IG GE+ S + G + Sbjct: 182 YPEPSDADINLTRQFRRATSFFDIRLLDHVIIGDGEFASLNKNGLV 227 >UniRef50_D1U9S4 DNA repair protein RadC n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9S4_9DELT Length = 227 Score = 213 bits (543), Expect = 3e-54, Method: Composition-based stats. Identities = 81/219 (36%), Positives = 115/219 (52%), Gaps = 1/219 (0%) Query: 4 NSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEY 63 REK+L+ AL D E+L L L +D LAK M+E FGSL L + Sbjct: 10 LGHRQRLREKLLRDS-RALADYEILELALAAIIPRRDTKPLAKLMIERFGSLKDALMARP 68 Query: 64 EQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIF 123 +Q + GIG A A EL R R R +PL P +++ + E F Sbjct: 69 DQLEAISGIGPAAVAHWALTQELFARMGEARTRSGAPLSDPAEVARAAMARIGSKGVEEF 128 Query: 124 MVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKA 183 F+DS++RVI ++ GT++ V PREI+ A+++ A+ALILAHNHP G PS+ Sbjct: 129 WAAFMDSKNRVIAWEQVSKGTVDATPVFPREIMVTALRLEAAALILAHNHPGGDPTPSRE 188 Query: 184 DKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 D +T RI + Q + +R+LDHI++ EY SF E G + Sbjct: 189 DLDLTRRIRDTAQGLGIRILDHIIVTDHEYYSFNEHGRL 227 >UniRef50_A4W1K3 UPF0758 protein SSU98_1084 n=76 Tax=Streptococcus RepID=Y1084_STRS2 Length = 246 Score = 212 bits (541), Expect = 6e-54, Method: Composition-based stats. Identities = 69/219 (31%), Positives = 130/219 (59%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 ++ + +PRE++++ G L++ ELLA+F+RTGT+ + V L+ ++L SL L Sbjct: 4 IEFKEEAFLPRERLVEVGAERLSNQELLAIFIRTGTKKEPVSILSNKLLNRLESLAALRE 63 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 E+ + GIG K ++K + EL +R + +L E + ++ +++ Sbjct: 64 LSIEELQSLTGIGRVKAIEIKAMIELGKRINQSELLLNERILGSEKLGRKMIHEIGHKKQ 123 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E + ++L++Q+++I+ + +F G++N PREI+ A+K A+++I+ HNHPSG +P Sbjct: 124 EHLVALYLNTQNQIISQKTIFIGSVNRSIAEPREILHYAVKCMATSIIIVHNHPSGSVQP 183 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAER 219 S+ D L TE + +SC+ + L +LDH+++G +Y SF E Sbjct: 184 SRNDLLFTENLKESCEKLGLVLLDHLIVGNKDYYSFREE 222 >UniRef50_Q8DI83 UPF0758 protein tlr1707 n=31 Tax=Cyanobacteria RepID=Y1707_THEEB Length = 250 Score = 212 bits (540), Expect = 7e-54, Method: Composition-based stats. Identities = 78/228 (34%), Positives = 121/228 (53%), Gaps = 10/228 (4%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTG--TRGKDVLTLAKEMLENFGS---- 54 + + PREK+L G L+ ELLA+ L TG + L + +L+ G Sbjct: 8 VADLPAGDRPREKLLSQGARYLSSAELLAILLGTGQGAGKLSAVGLGQFILKQLGERTGD 67 Query: 55 ----LYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREF 110 + L E+ + G+G AK + EL +R + R E++ + SP + Sbjct: 68 STDAVSALRDITPEELMAIPGVGPAKATTILAAVELGKRVFQSRPGEQTIIDSPALAAAV 127 Query: 111 LQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILA 170 L + L + E F V+ LD +HR++ + GT HPREI REA++ NAS LI+A Sbjct: 128 LAADLMWQATERFAVLLLDVRHRLLGSHVITVGTATETLAHPREIFREAVRRNASRLIIA 187 Query: 171 HNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAE 218 HNHPSG PS+AD +T++I+++ Q M++ VLDH+++G G+Y S E Sbjct: 188 HNHPSGNLSPSQADLDLTKQILQAGQLMEIPVLDHLILGNGDYQSLRE 235 >UniRef50_C4XRP2 DNA repair protein RadC n=4 Tax=Desulfovibrionales RepID=C4XRP2_DESMR Length = 228 Score = 212 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 75/214 (35%), Positives = 121/214 (56%), Gaps = 1/214 (0%) Query: 9 MPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSG 68 ++++L AL E+L L L +D LAKE+L FGSL G+LT+ +E+ G Sbjct: 16 RLKDRLLDD-PRALAKYEVLELVLGYVNVRRDNKPLAKELLARFGSLRGVLTARFEELRG 74 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 V G G L E+ R++ MR+ + L SP++ E ++++ +E E F + + Sbjct: 75 VPGFGAGAEEFLTLWREVWARFHEQPMRDRAVLGSPDVVAEMARARIGVKEHEEFWMALV 134 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 D+++R++ R+ GT++ V+PRE+I A++ NAS +IL HNHP +PS D T Sbjct: 135 DTKNRLVGWERVSKGTVDQAAVYPREVIAMALRYNASGVILVHNHPGADPKPSAEDMAFT 194 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 RI+ + + MD+RVLDH+V+ + SF G I Sbjct: 195 RRIVAAAREMDIRVLDHLVVTENRFFSFQAEGMI 228 >UniRef50_D1W0Q6 Putative DNA repair protein RadC n=2 Tax=Prevotella RepID=D1W0Q6_9BACT Length = 259 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 67/221 (30%), Positives = 116/221 (52%), Gaps = 1/221 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLL- 59 + + ++ PREKM + G SAL+ ELLA+ + +G+ + + L K +L + + L Sbjct: 36 IVHWAEADRPREKMERLGASALSPAELLAILIGSGSVDESAVDLMKRLLNDCNNNLNTLG 95 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 ++ + GIG AK + EL +R + E + L S E++ ++ + Sbjct: 96 KQTIQELTNYKGIGPAKAITILAACELGKRRAMEKAEERADLSSALAIYEYMHPRMQDLD 155 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 E ++ ++ ++++I R+ G ++ V R I+REA+ NA+ L L HNHPS A Sbjct: 156 VEEAWILLMNQRYKLIKAMRISHGGISETAVDVRVIMREAVLSNATVLALCHNHPSNQAF 215 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 PS D +T+RI ++ Q M + LDHI++ G Y S+ E G Sbjct: 216 PSTEDDRLTKRIHEASQLMRIYFLDHIIVTDGRYYSYREEG 256 >UniRef50_A6Q5Q5 DNA repair protein RadC n=2 Tax=unclassified Epsilonproteobacteria RepID=A6Q5Q5_NITSB Length = 220 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 74/222 (33%), Positives = 127/222 (57%), Gaps = 6/222 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 + + PREK+L+ G AL D EL+A+ L +G +GKDV+ L+KE+++ F Sbjct: 5 INELEKFEKPREKLLEKGAKALKDYELVAILLGSGVKGKDVIKLSKEIIKLFQ--QDFDA 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 E+ +H +G+AK AQ+ EL++RY ++ ++S E L+ +++ Sbjct: 63 INIEKLLQIHELGIAKAAQIVSAVELSKRYL---FKQHKTVISANDVYEELKEYF-DKKQ 118 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+ +LD +R+ R + GTLN VHPRE+ AI+ +++I+AHNHPS P Sbjct: 119 EYFIAFYLDGANRICEKRVITIGTLNQSLVHPREVFAPAIESRCASIIVAHNHPSNNLTP 178 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S+ D L+T+++ +S + + + +LDHI+ + +VS E G + Sbjct: 179 SREDILVTQKLKQSGKILGIELLDHIIFSKEGFVSLQEEGIL 220 >UniRef50_C7TC16 DNA repair protein n=8 Tax=Lactobacillus RepID=C7TC16_LACRG Length = 222 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 72/212 (33%), Positives = 117/212 (55%) Query: 6 QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQ 65 PRE++L G ALTD ELL L +R G + V + E+L + +L GL + + Sbjct: 4 ATEQPRERLLAHGPQALTDAELLQLIVRAGNQHYPVQEIVSEVLTTYPALRGLAEGDGDS 63 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMV 125 + G+G AK A + EL RR + + + E + + S+ G +E ++ Sbjct: 64 LDHIRGLGAAKRASILAGVELGRRVMRRQSVRYGQIKNSEQLGKTMVSRFAGANQESMLI 123 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 +FLD ++++IT + + GT++ PR + REA+K++A+ LI+ HNHPSG PS+AD+ Sbjct: 124 LFLDVKNQIITEQIVAIGTVDSALADPRVVFREALKLSATNLIMVHNHPSGDPSPSQADR 183 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFA 217 T R + + + +LDH++IGR Y SFA Sbjct: 184 DTTTRFQLAAALLGMHLLDHLIIGRQSYYSFA 215 >UniRef50_A8ZUS2 DNA repair protein RadC n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUS2_DESOH Length = 253 Score = 210 bits (535), Expect = 3e-53, Method: Composition-based stats. Identities = 72/221 (32%), Positives = 112/221 (50%) Query: 2 KNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTS 61 K REK L G+S D E++ L L T KD AK + F +L G+L + Sbjct: 8 KGTGHRQRLREKFLASGLSGFHDYEIIELLLTLATPRKDCKAPAKAAMAEFKTLQGVLNA 67 Query: 62 EYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEERE 121 E + GIG ++ + +A R + L + +L L RE Sbjct: 68 APEALCRIDGIGPKNLFGIRLVKAVADRCLEKELVGRPLLANSTDLLNYLNHTLRDRHRE 127 Query: 122 IFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPS 181 F IF+D+++RVI L G+L V+PRE++ A+ +A+ALI HNHPSG EPS Sbjct: 128 TFAAIFMDAKNRVIVVETLSEGSLTESPVYPREVVARALAHHAAALICCHNHPSGEPEPS 187 Query: 182 KADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + D IT +++ +C+ M + V +HI++G + SFA+ G++ Sbjct: 188 RQDIAITRKLVMACKTMGITVHEHIIVGERGHFSFADNGYM 228 >UniRef50_B2KEG6 DNA repair protein RadC n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KEG6_ELUMP Length = 228 Score = 210 bits (534), Expect = 3e-53, Method: Composition-based stats. Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 4/225 (1%) Query: 2 KNNS----QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYG 57 K + K K G+ + E L L L KD +A E+++ FGSL G Sbjct: 4 KEKPSHTGHRERIKNKFAKNGLDGFMEHETLELLLTYSIPRKDTKPIAWELIKKFGSLSG 63 Query: 58 LLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTG 117 +L + ++ V G+G LK + + ++Y ++++ + +PE + ++ L Sbjct: 64 VLDASPQELMEVKGVGKETALFLKVVRGVYKKYAFSKLKKADIIRTPEDVANYCRASLAE 123 Query: 118 EEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGC 177 + E+F VI+L ++ VI L G ++ + PR+++ A+K A ++L HNHPSG Sbjct: 124 HKDEVFEVIYLTVRNTVIGTEVLSVGAIDRASISPRKVVEGALKAKAVGIVLVHNHPSGD 183 Query: 178 AEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS D T+ + ++ + + + V DHI++ RG Y S + I Sbjct: 184 PSPSMEDISFTKEVAQAARILGIMVHDHIIVVRGGYYSMRAKSQI 228 >UniRef50_B1YJT0 DNA repair protein RadC n=2 Tax=Exiguobacterium RepID=B1YJT0_EXIS2 Length = 217 Score = 209 bits (533), Expect = 5e-53, Method: Composition-based stats. Identities = 73/213 (34%), Positives = 127/213 (59%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 P++ + G++ T VELLA +R+GTR + L +A+++LE + SL L + Sbjct: 5 PKDMIQLKGLAQATTVELLACLVRSGTRNRCPLEIAEDLLEIYPSLIELEAAGVGGLEKA 64 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+G AK Q+ EL RR + SP+ E L ++ ++E F+ ++L+ Sbjct: 65 PGVGKAKALQIMAGLELGRRLVTEPKWVRPVVRSPDDAAELLMEEMRLYQQEHFICLYLN 124 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 +++ VI+ + LF G LN VHPR+I REAI+ +A++ I HNHPSG PS+ D ++E Sbjct: 125 TKNEVISKKTLFIGGLNTSIVHPRDIFREAIRCSAASFIAVHNHPSGDPTPSREDIEVSE 184 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 R++++ + + + +DH+VIG G+++S +RG++ Sbjct: 185 RMVEAGRLIGISCIDHLVIGHGQFISMKQRGFM 217 >UniRef50_Q6AQC9 Related to DNA repair protein RadC n=4 Tax=Deltaproteobacteria RepID=Q6AQC9_DESPS Length = 249 Score = 209 bits (533), Expect = 5e-53, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 118/217 (54%), Gaps = 1/217 (0%) Query: 6 QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQ 65 R + + G+ L+D E++ L L GT D A+ +LE + S +L + Sbjct: 17 HRDRLRARYFERGLDGLSDAEIIELLLSFGTPRADCKLQARALLEKYTSFARVLEASPVA 76 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMV 125 V G+G + I +A RY +R+ +S L S E+L ++ G ++E+F V Sbjct: 77 LQEVKGVGPKNSFAISFIHAVAARYLQLRLEGKSYLHSSTEVVEYLSYRMRGLKKEVFCV 136 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 +FLDS H +I + G+L VHPRE++ +A++ +A+ALI++HNHPSG PS D Sbjct: 137 VFLDSSHGIICSEIIAEGSLTVNTVHPRELLVKALEHHAAALIISHNHPSGALLPSPQDI 196 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +T + C M +++LDHI+IG G Y SFA+ G + Sbjct: 197 QLTRLLYFLCSSMQIQLLDHIIIGDGAY-SFADHGLM 232 >UniRef50_C8NZ93 DNA repair protein RadC n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZ93_ERYRH Length = 235 Score = 209 bits (533), Expect = 5e-53, Method: Composition-based stats. Identities = 81/212 (38%), Positives = 125/212 (58%) Query: 6 QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQ 65 +PREK+L G + LTD EL+A+ LRTGTR K+V++LA E+L + G + L+ +Y Q Sbjct: 15 SQFLPREKLLVLGPNKLTDEELVAILLRTGTRNKNVVSLASEVLTSIGGIQNLIKIQYSQ 74 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMV 125 S + G+ AK L + EL RR E+ L S + +L ++ EE+E+F V Sbjct: 75 LSKIKGMKQAKCTTLLAVHELLRRIVMPFPGEKIKLSSCDRIVRWLNLEIGFEEQELFRV 134 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 +FL +Q+ +I + LF GT + VHPR++ REA++ NAS ++L HNHP G S+AD Sbjct: 135 LFLSTQNNLIRYLDLFKGTADKSLVHPRDVFREAVRCNASRIVLVHNHPGGSLSASEADV 194 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFA 217 +T +I+ + + V+DHI++ VS Sbjct: 195 EVTRALIEVGMMIGIEVVDHIIVTSTNSVSLR 226 >UniRef50_Q2G8R8 DNA repair protein RadC n=5 Tax=Sphingomonadales RepID=Q2G8R8_NOVAD Length = 245 Score = 209 bits (533), Expect = 5e-53, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 121/214 (56%) Query: 9 MPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSG 68 R++++ G AL D E++ L D +A+ +++ FGSL G+L ++ + + Sbjct: 32 RLRKRLMAGGEDALADHEVIEYLLMVARPRIDTKPIARSLVQRFGSLAGVLNADPQALAL 91 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 +G A L+ +A ARR +RE+ L + + ++L + E V++L Sbjct: 92 HPNMGETSAAALRIVALAARRLARTVVREQPILSNWQALLDYLHIDMAHLTVERVRVLYL 151 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 +SQ+ +I + GTL+ ++ RE+IR+A+ + A+A+IL HNHPSG +PS+AD +T Sbjct: 152 NSQNMLILDHLVSEGTLDESPIYTREVIRKAMDVGAAAMILVHNHPSGSPKPSRADIQVT 211 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++++++ + M + V DHIVIGR + S +G I Sbjct: 212 QKVMEAARLMGMTVHDHIVIGREGHTSLKAQGLI 245 >UniRef50_A9BIK5 DNA repair protein RadC n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BIK5_PETMO Length = 222 Score = 209 bits (532), Expect = 6e-53, Method: Composition-based stats. Identities = 78/214 (36%), Positives = 122/214 (57%), Gaps = 2/214 (0%) Query: 4 NSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEY 63 L PREK+ K+G +LTD EL+A+ LR G R +V +++++L+ + +L L+ Sbjct: 1 MEDQLKPREKLEKYGPQSLTDQELIAIILRHGVRNYNVFDVSEQILKKYKTLSELVDISL 60 Query: 64 EQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREES-PLLSPEMTREFLQSQLTGEEREI 122 E+ S G+G LK E+ +RY+ ++R++ + SPE + E Sbjct: 61 EEISKEKGVGKVGAINLKAALEIGKRYHLQKLRQKYQKVTSPEEAYHVC-EDMIYLSTET 119 Query: 123 FMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSK 182 IFLDS+ +IT + + +GT+N HPR+I REAI NA + IL HNHPSG PS Sbjct: 120 VRAIFLDSKLHIITIKDISNGTVNMSIAHPRDIFREAIMYNAVSFILVHNHPSGDPTPSM 179 Query: 183 ADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSF 216 D+ IT++I+ S + + + + DHI+IG+ Y SF Sbjct: 180 HDRDITKKIMDSGEILGINMNDHIIIGKDSYFSF 213 >UniRef50_C3WLA1 DNA repair protein radC n=2 Tax=Fusobacterium RepID=C3WLA1_9FUSO Length = 242 Score = 209 bits (532), Expect = 7e-53, Method: Composition-based stats. Identities = 73/222 (32%), Positives = 112/222 (50%), Gaps = 3/222 (1%) Query: 4 NSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEY 63 R++ L GI + +D E+L L +D +AK +L+ F SL + ++ Sbjct: 21 KGHRERIRKRFLDKGIHSFSDYEILEFLLFYCNAQEDTKPIAKAILKEFKSLNRVFKADI 80 Query: 64 EQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREE---SPLLSPEMTREFLQSQLTGEER 120 ++ + GIG +K + EL Y ++ E + E +FL++++ E+ Sbjct: 81 KELEKIKGIGPISAILIKFVGELLTELYGENLKIETKADKITDKEALLKFLRNKIGYEDV 140 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F VI+L S + VI SGTL+ ++PREI + I NA ++I+AHNHPSG P Sbjct: 141 EKFYVIYLSSSNEVIAFEESSSGTLDRSSIYPREIYKRVIMENAKSIIIAHNHPSGNTCP 200 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 SK D IT I K + +L+HI+I R Y SF E G I Sbjct: 201 SKCDIDITNEIAKGLKNFGALLLEHIIITRDSYFSFLEEGLI 242 >UniRef50_C0R2T1 DNA repair protein RadC n=7 Tax=Wolbachia RepID=C0R2T1_WOLWR Length = 224 Score = 208 bits (531), Expect = 9e-53, Method: Composition-based stats. Identities = 61/224 (27%), Positives = 119/224 (53%), Gaps = 2/224 (0%) Query: 1 MKN--NSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGL 58 MKN REK++ +L D E+L L + DV +AK ++ENFGSL + Sbjct: 1 MKNYKKGHRKRLREKIILDNGQSLLDYEVLEHILYSAYSRIDVKPIAKSLIENFGSLNKV 60 Query: 59 LTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGE 118 ++ E V G+ A + + + + R +++ + + E ++L+ + Sbjct: 61 FNADLEALQNVDGVSNAAISAIFCVKQAFVRSAREEIKDLPIIDNWEKLLDYLRISIGSL 120 Query: 119 EREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCA 178 +E F VI+++ ++R+I GT++ ++ REII+ A+ I +++++++HNHPS Sbjct: 121 NKENFRVIYMNKKYRLIAEDLQNIGTVDQTPLYVREIIKRALLIGSTSIVISHNHPSRDT 180 Query: 179 EPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +PS +D +T ++ ++CQ + + ++DHI+I Y SF E + Sbjct: 181 QPSNSDISLTRQLAEACQSIGIELIDHIIITFSSYFSFKENRLL 224 >UniRef50_UPI0000E0FF1E DNA repair protein RadC n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0FF1E Length = 213 Score = 206 bits (525), Expect = 4e-52, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 125/207 (60%) Query: 16 KFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVA 75 + IS +D +LL + L+ ++ LA+ +L GSL+G+L + F + G+G Sbjct: 6 RGHISQWSDSQLLGVILQQRHSSENSQALAETLLTELGSLHGVLNASQNAFCDIPGVGPQ 65 Query: 76 KFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVI 135 K+ + + + EL +R + L S + ++ F SQL +E F V L++QH + Sbjct: 66 KYKRCQAVVELHKRTGAQHVERMMKLDSVDESKAFFISQLQYYPQERFAVALLNNQHEFL 125 Query: 136 THRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSC 195 ++ LFSGT+N V+PREI++ A+ NA+ +ILAHNHPSG EPS+AD IT+RI ++ Sbjct: 126 HYKELFSGTINAASVYPREIVKYALDYNAANVILAHNHPSGTPEPSQADIAITQRIRQAL 185 Query: 196 QFMDLRVLDHIVIGRGEYVSFAERGWI 222 +D++VLDHIV+G G VS A+RG + Sbjct: 186 DLIDVQVLDHIVVGAGNAVSLAQRGCL 212 >UniRef50_Q2GL92 DNA repair protein RadC n=12 Tax=Rickettsiales RepID=Q2GL92_ANAPZ Length = 232 Score = 206 bits (525), Expect = 4e-52, Method: Composition-based stats. Identities = 57/221 (25%), Positives = 113/221 (51%) Query: 2 KNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTS 61 + R+K+L + D E+L L L + D+ +AK ++E FG+L +L + Sbjct: 12 QQLGHRERLRQKILNGNGDGVFDYEVLELLLCSVRGRVDLKPVAKRLMERFGNLSQVLYA 71 Query: 62 EYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEERE 121 + + V +G + A L + E R + L ++L+ ++ E Sbjct: 72 DINELRKVKDMGDSSVAMLVCVREALIRVMRGNITSCVMLDKWPKLIDYLKVKIGNSTIE 131 Query: 122 IFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPS 181 F+V++L+ ++ +I +GT++ ++ RE+IR+A+ A ++++HNHPSG +PS Sbjct: 132 NFLVLYLNKRYSLIADEVQSTGTVDETPLYIREVIRKALLCGAVYIVISHNHPSGDPKPS 191 Query: 182 KADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 KAD +T ++ +C MD+ ++DH+++ + SF G + Sbjct: 192 KADINVTNKLRIACNSMDIELVDHVIVTSKRHYSFKTHGLL 232 >UniRef50_B0N2U6 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N2U6_9FIRM Length = 225 Score = 206 bits (525), Expect = 4e-52, Method: Composition-based stats. Identities = 76/222 (34%), Positives = 120/222 (54%), Gaps = 1/222 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +KN PREK GI +L ++ELLAL LRTG + + + LA+ ++ G L Sbjct: 3 LKNYPLEERPREKAFHHGIESLNNIELLALVLRTGNKQESAIELAQRVINEIGGFRYLHD 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 Y Q + GI AK ++ I E+A+R + S + P E L++QL E++ Sbjct: 63 INYYQLIQIKGIKQAKAIEVLAIIEIAKRLDKQPV-AMSAIKEPRDGYELLKNQLMFEQQ 121 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E +V+ L+S+ VI + +F G N + RE+ +EA+ ++ +++ HNHPSG EP Sbjct: 122 EKVIVLCLNSRLEVIKEKTVFIGGNNISIISGRELFKEALICGSNRVMVVHNHPSGNPEP 181 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S D TER+ + +D+ V+DH++IGR + SFA I Sbjct: 182 SIEDIEATERLYSMAKELDIDVVDHLIIGRSRFYSFASNKII 223 >UniRef50_A5URD0 UPF0758 protein RoseRS_0767 n=7 Tax=Bacteria RepID=Y767_ROSS1 Length = 233 Score = 205 bits (523), Expect = 8e-52, Method: Composition-based stats. Identities = 79/221 (35%), Positives = 130/221 (58%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 ++ PRE++ G +AL D ELLA+ LR G G + + LA+++L FG GL Sbjct: 8 IRELPPTDKPRERLRSSGAAALADAELLAILLRVGIEGMNAIQLAQQLLVEFGGWNGLQR 67 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + +E+ + G+G AK AQLK E+ RR E + SP + +Q +++ ++ Sbjct: 68 AGFEELAQRRGMGEAKTAQLKAALEIGRRLLLAGGDERFLIRSPTDAAQLMQIEMSHLDQ 127 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E I LD+++RV + ++ G+L+ V EI +E I++N++++I+ HNHPSG P Sbjct: 128 EQLRAICLDTKNRVQKIQTVYIGSLHTSMVRIGEIFKEPIRLNSASIIVVHNHPSGDPTP 187 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 S D ++T +II++ + +D+ VLDH+VIG G +VS ERG Sbjct: 188 SPEDVVVTRQIIEAGRLLDIDVLDHLVIGAGRFVSMRERGL 228 >UniRef50_UPI0001BC61BD DNA repair protein radC n=3 Tax=Fusobacterium RepID=UPI0001BC61BD Length = 227 Score = 205 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 65/224 (29%), Positives = 124/224 (55%), Gaps = 2/224 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 ++N R++ L+ G S+L + E+L L L KD L+KE+L FG+L + Sbjct: 4 LRNEGHRERLRKRYLERGFSSLQEYEVLELLLTYALPRKDTKALSKELLHRFGTLSAVCK 63 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREE--SPLLSPEMTREFLQSQLTGE 118 ++ E+ + GI L + +L + + ++EE + E ++++Q+ E Sbjct: 64 AKTEELQSIKGIKENTSILLHFVGDLQKELFRNSLQEEKNIHIQRKEDLISYVRAQIGFE 123 Query: 119 EREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCA 178 RE F V+FL++ ++++ LF G+++ V+PREI+ + +K A ++I AHNHPSG Sbjct: 124 NREKFFVLFLNTANQLLCSEELFQGSIDRSAVYPREILEKVLKYKAKSVIFAHNHPSGNT 183 Query: 179 EPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +PS+ D +T+ + + + D+ +++HI++ + Y SF E G + Sbjct: 184 QPSRQDIALTKEMKDALRMFDVLLIEHIIVSKHSYFSFLEEGLL 227 >UniRef50_C5SK46 DNA repair protein RadC n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SK46_9CAUL Length = 244 Score = 205 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 113/214 (52%), Gaps = 9/214 (4%) Query: 18 GISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH------- 70 G S L D E+L L L +DV LAK +L FGSL +L++ E V Sbjct: 31 GTSVLPDYEVLELILFRSIPQRDVKPLAKALLSRFGSLSAVLSAPLEDMLQVSALDNKGR 90 Query: 71 --GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 + L+ + E RR ++ + + S + +L+ L E RE F ++FL Sbjct: 91 SLKMTPDIALDLQLMFEATRRLMAEPLKRSTVISSWQALLSYLRVTLAHEPREQFRLLFL 150 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 D ++++I + GT++H +PREI+R A++++AS++IL HNHPSG PS+ D +T Sbjct: 151 DKKNQLIADEIMNYGTVDHAPAYPREIMRRALELSASSVILVHNHPSGDPMPSQGDIDMT 210 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + I + + + + + DH+++GR +S + G I Sbjct: 211 KANIAAGKPLKIAIHDHLIVGREGVLSMKQVGAI 244 >UniRef50_C8N8A0 DNA repair protein RadC n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N8A0_9GAMM Length = 224 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 87/216 (40%), Positives = 123/216 (56%), Gaps = 1/216 (0%) Query: 6 QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQ 65 MPRE+ML G AL D ELLA+ LRTG++G +VL ++E+L G L GL S Sbjct: 7 STDMPRERMLHNGAQALADYELLAILLRTGSKGSNVLEFSRELLRGRGGLVGLFNSRAAD 66 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREE-SPLLSPEMTREFLQSQLTGEEREIFM 124 V G+G AK A++ + ELARR+ MR+ + R++L Q G+ E F Sbjct: 67 LQAVRGLGKAKTAEILAVTELARRFMREEMRQPSWSFKTAADVRDYLLMQFKGQALEAFG 126 Query: 125 VIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKAD 184 V+FL+ QH I RL +G V V R++I A+ +A+A+ILAHNHP+G PS D Sbjct: 127 VLFLNQQHGFIAFERLAAGAAAKVPVPVRQLIASALHHHAAAVILAHNHPAGSGAPSAED 186 Query: 185 KLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 + +T + + MD+R+LDH ++ E VS ERG Sbjct: 187 RDVTRHLDDALALMDIRLLDHFIVAGNEMVSMRERG 222 >UniRef50_Q8UEZ6 UPF0758 protein Atu1607 n=100 Tax=Alphaproteobacteria RepID=Y1607_AGRT5 Length = 280 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 72/217 (33%), Positives = 117/217 (53%) Query: 6 QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQ 65 R + G +AL D ELL L L +D +AK ++ FG+L +L + Sbjct: 64 HRDRLRTRYRDGGDAALADYELLELLLFRLIPRRDTKPIAKALIARFGTLGSVLGAPLPL 123 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMV 125 V G+G A LK +A +++R +R + L S ++ + + E RE F + Sbjct: 124 LQEVKGVGEAVALDLKLVASVSQRMLKSEIRNKQVLGSWSSVIDYCHAAMAHETREQFRI 183 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 +FLD ++ +I GT++H V+PREI+R A++++++ALIL HNHPSG PS+AD Sbjct: 184 LFLDKRNVLIADEVQGQGTVDHTPVYPREIVRRALELSSTALILIHNHPSGDPTPSRADI 243 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +T+ II + + + + V DHI+IG+ + SF I Sbjct: 244 EMTKTIIDTAKPLGITVHDHIIIGKDGHASFKGLRLI 280 >UniRef50_C6XNR3 DNA repair protein RadC n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNR3_HIRBI Length = 272 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 64/217 (29%), Positives = 116/217 (53%) Query: 6 QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQ 65 R+++L+ + L D ELL L L +DV +AK +++ FG + G++ + ++ Sbjct: 56 HRDRLRDRVLQGHGNTLPDYELLELLLFAFIPRRDVKPVAKALIDKFGGISGVMAAPIKR 115 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMV 125 V GIG ++ L +R ++ + + ++ L E E F V Sbjct: 116 LKEVDGIGETCATYIQATHLLNQRCSLEEVKARPIISNWGALLSHVRIALQHETEEQFRV 175 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 +FLD ++++I R GT+NH V+PRE+ + A++++ASALIL HNHPSG PS+AD Sbjct: 176 LFLDHKNQLIADERQSQGTINHAPVYPRELAKRALELSASALILVHNHPSGDPTPSRADI 235 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +T I+ + + +++ + DH+++G+ S + I Sbjct: 236 DVTREIMDAFEPLEITIHDHLIVGKKGITSLKAKNLI 272 >UniRef50_A5EYF9 Response regulator receiver domain protein-DNA repair protein RadC n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EYF9_DICNV Length = 401 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 75/224 (33%), Positives = 127/224 (56%), Gaps = 4/224 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 + ++ L MPRE++L+ G SAL+D ELLA+ LRTG GK VL A+E++ + G L GLLT Sbjct: 176 ITSDPSLDMPRERILRLGASALSDAELLAILLRTGVIGKPVLAFAQELIASRGGLVGLLT 235 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMR-EESPLLSPEMTREFLQSQLTGEE 119 S E + GIG AK A++ + EL +R+ ++ E S + R FL G Sbjct: 236 SRKEHLLPIKGIGQAKTAEILAVTELCKRFIAADLQLPEWQFSSADDVRNFLLMHYKGLG 295 Query: 120 REIFMVIFLDSQHRVITHRRL---FSGTLNHVEVHPREIIREAIKINASALILAHNHPSG 176 E ++ L+ +++ + + R+ F ++ V V R++++ + +A+A++L HNHP+ Sbjct: 296 FEEVAILLLNQKNQYLAYERIGQAFGSEVSQVNVSCRKLVKSVLDSDAAAVVLVHNHPAQ 355 Query: 177 CAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 E S++D T+ I + + +R+LDH V+ + +S E G Sbjct: 356 STELSESDLQTTKFIENFLKPLGVRLLDHFVVAGNQVISLRETG 399 >UniRef50_A9NF52 DNA repair protein n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NF52_ACHLI Length = 217 Score = 203 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 64/212 (30%), Positives = 119/212 (56%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 + PREK+++ G+ AL D EL+A+ LRTG +DVL LAK++L + +L E Sbjct: 1 MKPREKLIQHGVRALEDYELIAILLRTGNTKEDVLLLAKKVLSQLDNFEDMLHITVEDLL 60 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 ++GI AK + EL RR + + + L+ ++ +E +V+ Sbjct: 61 TIYGISDAKATTIIAAVELGRRLSDRKKPVRKMITESSEVYHLLKEDMSYLRKEHLIVLC 120 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 LD + ++ + ++ GT + ++V +++ + A++I A +I+ HNHPSG + PS+AD + Sbjct: 121 LDIKGNLLKNETIYMGTTSSIQVSVKDLFKSAVRIGAFGIIVVHNHPSGDSTPSQADDKL 180 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAER 219 T+ I + + + + ++DHI+IGR E+ S+ + Sbjct: 181 TKLIKNAGEVLSIELIDHIIIGRNEFFSYRRQ 212 >UniRef50_Q0F0W4 DNA repair protein RadC n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0W4_9PROT Length = 261 Score = 203 bits (517), Expect = 3e-51, Method: Composition-based stats. Identities = 72/218 (33%), Positives = 112/218 (51%) Query: 4 NSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEY 63 R++ + G D E+L L L DV LAK +L FG+L G+ + Sbjct: 43 KGHRQRLRQRFSQRGFDGFHDYEVLELLLTYAIARTDVKPLAKSLLTRFGTLAGVFDAPL 102 Query: 64 EQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIF 123 + VHGIG L I ++ RY + L PE R +L+ + G E F Sbjct: 103 AELKEVHGIGEGGALFLTLIRQVEVRYLASDLPGRQLLYRPERVRAYLRLLVQGRGMECF 162 Query: 124 MVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKA 183 +F D QHR++T + LF GT++ V+PR +++ A++++A +IL HNHP G S Sbjct: 163 GAMFTDQQHRLLTTQILFEGTVDRTAVYPRNLMKRALELDARGMILFHNHPGGTPHASNE 222 Query: 184 DKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGW 221 D +T R+ ++C ++L++LDH +I E +SF E GW Sbjct: 223 DIELTRRMAEACAPLELKILDHFLIADKEVLSFREHGW 260 >UniRef50_Q8RF15 UPF0758 protein FN0909 n=11 Tax=Fusobacterium RepID=Y909_FUSNN Length = 232 Score = 203 bits (516), Expect = 5e-51, Method: Composition-based stats. Identities = 73/227 (32%), Positives = 115/227 (50%), Gaps = 7/227 (3%) Query: 3 NNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSE 62 N REK GI + E+L L L KD +AKE+L F SL + + Sbjct: 6 NQGHRERIREKFFNNGIDGFAEYEILELLLTYCIPRKDTKPIAKELLNKFKSLDNVFKAS 65 Query: 63 YEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREES-------PLLSPEMTREFLQSQL 115 +++ S + G+G LK + EL Y ++ + + + ++ ++L++++ Sbjct: 66 FDKLSTIDGLGKNSITFLKLLGELPSIIYKDELKNKKLIDKETLKISNKDILLKYLRNKI 125 Query: 116 TGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPS 175 EE E F VI+L S + VI GTL+ V+PREI ++ I +NA ++ILAHNHPS Sbjct: 126 GYEEIEKFYVIYLSSSNEVIEFEENSVGTLDRSSVYPREIYKKVINLNAKSIILAHNHPS 185 Query: 176 GCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PSK+D +T I K + +++HI+I + Y SF E G I Sbjct: 186 DNITPSKSDIELTNEIAKGLKNFGALLIEHIIITKNSYFSFLEEGLI 232 >UniRef50_B8FHA4 DNA repair protein RadC n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FHA4_DESAA Length = 265 Score = 203 bits (516), Expect = 5e-51, Method: Composition-based stats. Identities = 70/218 (32%), Positives = 122/218 (55%), Gaps = 4/218 (1%) Query: 9 MPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSG 68 RE+ L+ G+ D E++ L L T KD AK +++FGSL +L ++ + Sbjct: 33 RLRERFLQNGLDGFLDYEVVELLLTLATPRKDCKQQAKAAVDHFGSLKAVLAADKDDLQK 92 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRM---REESPLLSPEMTREFLQSQLTGEEREIFMV 125 V G+G A + + +A+++ + + S E L Q ++ E F + Sbjct: 93 VKGLGPANILGILLMRAVAKKHLESEAVLASLQEAVSSSEELYNLLNFQFENKKNECFFI 152 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 ++LD Q+R++ F G+LN V+ RE+I +A+K ASA++LAHNHPSG +PSK D Sbjct: 153 VYLDVQNRILNMETPFEGSLNASHVYTRELIDKALKTGASAVLLAHNHPSGNTKPSKNDI 212 Query: 186 LITERIIKSCQFMDLRVLDHIVIGR-GEYVSFAERGWI 222 +T + + + +++ +L+H++IG+ GEY SFA+ G++ Sbjct: 213 QLTYTLFTAFRSVEIHLLEHLIIGKQGEYYSFADHGYL 250 >UniRef50_B9QT39 DNA repair protein RadC n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QT39_9RHOB Length = 228 Score = 202 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 67/215 (31%), Positives = 109/215 (50%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 R + + G ALTD+E++ L L R + T+A+ +L F SL LL + + Sbjct: 14 EQLRFRCREVGPDALTDLEIITLLLVPLYRWEHAETIAQRLLSEFQSLPELLNAPRHRLL 73 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 G+G L I + R + E L +++Q+ + E E F +F Sbjct: 74 EFSGVGPVLADTLSAIRQCIVRSARAEITERRVLDCWSEVIDYIQATMGYLEIEQFRCLF 133 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 L+ +H VI + GT++H V+PRE++R A+ + ASALIL HNHPSG PS+ D + Sbjct: 134 LNKKHGVIADEVMQEGTVDHTPVYPRELMRRALILQASALILVHNHPSGDPTPSRPDIEM 193 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 T +++ + + + + DHI++ RG VSF + Sbjct: 194 TAQLVDIAKPLGIEINDHIIVARGLAVSFKGMNLL 228 >UniRef50_C1A4H3 DNA repair protein RadC n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A4H3_GEMAT Length = 244 Score = 202 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 82/223 (36%), Positives = 116/223 (52%), Gaps = 1/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLL 59 +K PRE++ G AL+ EL+A L +G +G + A+ + E G SL L Sbjct: 22 IKELPASERPRERLRALGSQALSTTELIATLLGSGQQGTSAVACAQVVFEQCGGSLGRLA 81 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 + + G+GVA+ A + EL RR PL P +L Sbjct: 82 AMPLAALTRIRGVGVARAAAVHAALELGRRMAGEAREAGLPLRGPRDVAAAFAPRLQDAP 141 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 E F V LD+QHR+ + G LN VHPRE+ REAI A+A+IL HNHPSG Sbjct: 142 VEEFHVAILDAQHRLERDVLITRGLLNSSLVHPREVFREAIAERAAAVILVHNHPSGDPT 201 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS D+ +TE+++ + + +D+ V DHI++GRG YVSFAE G + Sbjct: 202 PSAEDRAVTEQLVAAGRLLDIPVHDHIIVGRGRYVSFAEAGLL 244 >UniRef50_A0L491 DNA repair protein RadC n=4 Tax=Bacteria RepID=A0L491_MAGSM Length = 241 Score = 200 bits (509), Expect = 3e-50, Method: Composition-based stats. Identities = 63/218 (28%), Positives = 115/218 (52%), Gaps = 1/218 (0%) Query: 6 QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQ 65 R + + G+ D ++L L L +D +A +++ FGSL ++ ++ Sbjct: 18 HRDRLRNRFAQEGLDGFEDHQILELALFYALPRRDTNPIAHRLMQRFGSLSAVMEADPVD 77 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRM-REESPLLSPEMTREFLQSQLTGEEREIFM 124 + V G+G + + L RRY + R ++PL + R++L + G E+F Sbjct: 78 LATVEGMGETAALFITMLPALTRRYQHDAATRNKTPLNRADNVRDYLVPLMAGRTEEVFY 137 Query: 125 VIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKAD 184 V+ LD+Q R++ + GT+ VHPR+++ I+ A+ +ILAHNHPSG + S+ D Sbjct: 138 VLCLDAQCRLLFPALVTEGTIRQAHVHPRQVVELVIRHKAAHVILAHNHPSGNPKASQDD 197 Query: 185 KLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 L+T ++++ +D++VLDH++I + SFA G + Sbjct: 198 ILLTSHLMQALNPIDVQVLDHLIIAGEKVFSFASAGMM 235 >UniRef50_B0T9F0 DNA repair protein RadC n=1 Tax=Caulobacter sp. K31 RepID=B0T9F0_CAUSK Length = 223 Score = 200 bits (509), Expect = 3e-50, Method: Composition-based stats. Identities = 71/216 (32%), Positives = 123/216 (56%), Gaps = 5/216 (2%) Query: 8 LMPREKMLKFGISALTDVELLALFL-RTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQF 66 + G S L+DVE+L L L R+G R +LA +++ FG +L ++ Q Sbjct: 12 ERLQAMAASLGPSVLSDVEILELHLARSGHRE--AGSLAHDLIARFGGFCAVLAADQSQL 69 Query: 67 SGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVI 126 +G LK + E ARR + + L S ++L++ + G RE F V+ Sbjct: 70 HL--AVGELAAMDLKLLREAARRVTRADLAQRQLLTSFSQVADYLRALMAGLPREEFWVL 127 Query: 127 FLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKL 186 FLD ++++++ RL G+++H V+PRE++R A+++N SA+ILAHNHPSG +PS+ D Sbjct: 128 FLDRRNQLLSAERLGVGSVDHAPVYPREVMRRALELNCSAMILAHNHPSGDPQPSQPDIE 187 Query: 187 ITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +T+ +I++ + + +++ DH+++ G VSF G I Sbjct: 188 MTKTLIEAGKALQIQIHDHMIVAGGAVVSFRANGLI 223 >UniRef50_Q1DAY3 DNA repair protein RadC n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DAY3_MYXXD Length = 241 Score = 200 bits (508), Expect = 4e-50, Method: Composition-based stats. Identities = 74/212 (34%), Positives = 113/212 (53%), Gaps = 1/212 (0%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 RE++ + G +ALTD ELL + +G R +A +L G L GL+ E S Sbjct: 13 RERLFRLGAAALTDPELLCVVWSSGPRAPGAWAVAGALLSEGGGLKGLVQQEPLALSLRP 72 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+G + AQ EL RR R R P+ +L L RE+F V+ ++ Sbjct: 73 GVGPVRAAQALAALELGRRSQRARERRPRLRT-PKEIAAYLAPVLGALRREVFHVLCFNA 131 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++ ++ R+ GT+N V PRE+ A+ A++++LAHNHPSG EPS D +T Sbjct: 132 RNVLVHDARVAEGTMNTCPVDPREVFAAALTSRATSIVLAHNHPSGDPEPSVQDLGLTRH 191 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++ Q ++++VLDH+V+G G YVS ERG + Sbjct: 192 LVAGAQLLNIKVLDHVVMGDGGYVSMLERGLM 223 >UniRef50_Q2IG79 DNA repair protein RadC n=8 Tax=Anaeromyxobacter RepID=Q2IG79_ANADE Length = 235 Score = 199 bits (507), Expect = 4e-50, Method: Composition-based stats. Identities = 72/212 (33%), Positives = 104/212 (49%), Gaps = 2/212 (0%) Query: 9 MPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSG 68 PRE++L G AL+D ELLAL L TGT A ++E L L + + + Sbjct: 22 RPRERLLAAGPRALSDAELLALVLGTGTGRVSARAAALSLVEALP-LAELAWAPPDALAS 80 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 GIGVA+ A L EL RR R L P E L+ ERE F V+ L Sbjct: 81 WPGIGVARAAALAAAFELGRRGAWSPPRRGERCLDPRTVHELLR-HAAHAEREGFHVVLL 139 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 D + R++ ++ G+L+ V PR+ +R A++ A ++ HNHPSG PS D +T Sbjct: 140 DVRGRLLRAVQVAEGSLSQCPVSPRDALRPAVREGAHGVVFVHNHPSGDPTPSPDDVDLT 199 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 R+ + + + DH+++ G Y SF E G Sbjct: 200 ARLRAAADLVGVLARDHVIVAAGGYYSFVEAG 231 >UniRef50_Q18B06 UPF0758 protein CD1144 n=8 Tax=Clostridiaceae RepID=Y1144_CLOD6 Length = 235 Score = 199 bits (507), Expect = 5e-50, Method: Composition-based stats. Identities = 78/223 (34%), Positives = 130/223 (58%), Gaps = 2/223 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLEN-FGSLYGLL 59 +K + PREKML G+ +L++ ELLA+ LRTG + K+ + LA ++ + L Sbjct: 14 VKEMAPEERPREKMLAKGVKSLSNAELLAILLRTGNKNKNAIELANYIINRDIQGIRHLE 73 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 E+ + GIG++K Q+K EL R + + + +++P + + L + Sbjct: 74 DMTIEELCNIDGIGLSKSTQIKAALELGSRVASFKPIK-YKIMNPWDIQRYYMDSLRYLK 132 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 +E+F + L++++ +I+ + GTL+ VHPRE+ +EAI+ +AS +I+ HNHPSG E Sbjct: 133 KEVFKAVLLNTKNEIISDVDVSIGTLSSSLVHPREVFKEAIRRSASKIIVMHNHPSGSVE 192 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS+ DK IT R+IK + + + ++DHI+IG G Y SF E I Sbjct: 193 PSREDKNITSRLIKCGEIIGIEIIDHIIIGDGLYFSFKENMII 235 >UniRef50_B8J197 DNA repair protein RadC n=4 Tax=Desulfovibrio RepID=B8J197_DESDA Length = 229 Score = 199 bits (506), Expect = 6e-50, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 1/207 (0%) Query: 9 MPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSG 68 RE+ + + + D E+L L L KD LAKE+L FG + G++ + ++ Sbjct: 17 RLRERFERD-PAGMADYEVLELLLGYSLTRKDTKPLAKELLRRFGGIRGVMDARPDELLA 75 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 V G G + E RY + +R+ L +P+ QS+L G E + + Sbjct: 76 VPGFGPGLMTFFTALRETYSRYTDSAVRKREVLATPQAVARMAQSRLAGCPHEECWLALV 135 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 D ++R+ RL G + V V PR++ A+ AS +I+ HNHP G PS+ADK T Sbjct: 136 DQRNRLTAWERLRQGGVAEVPVQPRDVFEAALLRKASGIIVVHNHPGGNPAPSEADKTFT 195 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVS 215 + + + LR LDH+++ G+ S Sbjct: 196 AELQRLAPQLGLRFLDHVIVTEGDCYS 222 >UniRef50_UPI00016C0069 DNA repair protein RadC n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0069 Length = 225 Score = 199 bits (506), Expect = 7e-50, Method: Composition-based stats. Identities = 68/216 (31%), Positives = 117/216 (54%), Gaps = 3/216 (1%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGS---LYGLLTSEYEQF 66 P E++++ G L+D++L+ + L G + V LAK +L + L L +Y+ Sbjct: 3 PHERLVEDGACELSDIDLMTILLHNGIADQSVRDLAKLLLTDKHGEIQLKTLKDLKYDTL 62 Query: 67 SGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVI 126 + GIG K QL I E+A+R + + + L +PE + + +E+F + Sbjct: 63 KSIKGIGKMKAIQLVAIVEIAKRLHVPKPMQLIDLKNPEDVAGLFVEEFENKFQEMFYAL 122 Query: 127 FLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKL 186 +LDS+ +I + GTLN VH R++ R AI++ A++LI+ HNHPSG EPSK D Sbjct: 123 YLDSKLGLIKKHCISIGTLNMTIVHARDVFRPAIEVCANSLIVVHNHPSGDPEPSKQDIT 182 Query: 187 ITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 IT + + + + +LDH+++G G++ S + G + Sbjct: 183 ITRDLQFVGEVIKIPLLDHVIVGDGDFRSLRQMGIL 218 >UniRef50_Q2FT43 UPF0758 protein Mhun_2739 n=5 Tax=Archaea RepID=Y2739_METHJ Length = 225 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 75/223 (33%), Positives = 120/223 (53%), Gaps = 4/223 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 + + L PREK+ K G SAL D EL+A L GT+ D+LT++ ++ + L Sbjct: 6 ITDIDPLDRPREKIEKKGASALKDSELIAAILGKGTKNNDILTISSQVADL---LKKDNL 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQ-SQLTGEE 119 Y+ ++GIG K A L ELA RY +E + P+ + + + L+G+ Sbjct: 63 PSYDTLLRINGIGPTKAAVLMACFELANRYGTPAEKERIRITEPDHILKISEVTDLSGKS 122 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 +E F+V L+ VI R + G LNH VHPRE+ +AI A+A+I HNHPSG E Sbjct: 123 QEHFLVTTLNGASEVICTRTITMGLLNHSLVHPREVFADAITDRAAAIICIHNHPSGNPE 182 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS D +T ++ ++ + + + +LDH++ +G+ S G++ Sbjct: 183 PSSEDITVTRQLSEAGKILGISLLDHLIYTKGKVTSLRSLGYL 225 >UniRef50_D1BNF1 DNA repair protein RadC n=3 Tax=Veillonella RepID=D1BNF1_VEIPT Length = 232 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 75/224 (33%), Positives = 122/224 (54%), Gaps = 2/224 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLL 59 +K+ PREK L G S + ELLA+ LRTG +G+ ++LA +++++F +YGL Sbjct: 8 VKDMLPFQRPREKFLALGPSHMAMEELLAILLRTGVKGQSAISLASDIVQSFDDGVYGLN 67 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESP-LLSPEMTREFLQSQLTGE 118 + + GIG K L E+ RR ++++E P + +++ +L E Sbjct: 68 RMTVDNLIKIKGIGRDKAVTLCAALEMGRRLGELKIKETYEDFSQPFVIAQYVMERLRHE 127 Query: 119 EREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCA 178 + E L S++++I + +G L V R + ++AI NA+A+IL HNHPSG + Sbjct: 128 DVEHVWAAMLTSRNKLIQLEHISNGGLVSSLVEQRAVFKKAIACNAAAIILIHNHPSGDS 187 Query: 179 EPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS D +T+ + + QFM + VLDHIVIG E+ S +E G + Sbjct: 188 RPSDEDIRLTKMFVSAGQFMGIPVLDHIVIGDNEFTSLSEIGKL 231 >UniRef50_B1C9I2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9I2_9FIRM Length = 224 Score = 196 bits (499), Expect = 5e-49, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 118/213 (55%), Gaps = 3/213 (1%) Query: 12 EKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLLTSEYEQFSG-V 69 E++ G+ LTD EL+AL +R G K VL L+ ++ +G SL L+ E+ Sbjct: 13 ERLYDEGVGELTDSELVALIIRKGDSTKSVLELSNNIIRRYGASLRDLIGITREELKNDN 72 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+ K + E+ RR Y + +++ + + L ++ + E F VI L+ Sbjct: 73 PGMTDLKCDMILASLEIGRRAYLKKEKQK-IITCVMDIVDLLSYDMSFLDEEHFKVILLN 131 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 +++ VI + GT+N VH RE+ R AIK NA+++ILAHNHPSG + PS D+ +T+ Sbjct: 132 TKNMVIETELISIGTINTSLVHVREVFRNAIKKNANSIILAHNHPSGDSTPSIEDEHLTK 191 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 R+ + + + ++V+DH++IG+ Y SF E + Sbjct: 192 RLKDAGELIGIKVIDHVIIGKDNYFSFMEENML 224 >UniRef50_UPI00016B261F DNA repair protein RadC n=2 Tax=candidate division TM7 RepID=UPI00016B261F Length = 214 Score = 196 bits (498), Expect = 5e-49, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 124/215 (57%), Gaps = 5/215 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 + + L PREK+ ++G + L+D+ELL + +G + DV +A+E+L+ G Sbjct: 3 ISDRHPLERPREKLARYGTARLSDLELLMAIIGSGNKQADVGKIAREVLKIVRQKGG--D 60 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 Y+ V G+G AK + ELARRY ++ + SPE E L S + +++ Sbjct: 61 ISYDDLRYVVGLGEAKIPVIVASLELARRYLLD--SDQPIIDSPEKAVELL-SDIRDKKQ 117 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+ + LD +R+I R + GTL VHPRE+ +AI A+++I+AHNHPSG E Sbjct: 118 EYFVCLTLDGANRLIAKRVVTIGTLTASLVHPREVFADAIADRAASIIVAHNHPSGSLEA 177 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVS 215 S+ADK +T R+ ++ + + + + DHI+I + ++VS Sbjct: 178 SQADKDVTSRLAEAGRLLGITLNDHIIITKTDFVS 212 >UniRef50_B1H050 DNA repair protein RadC n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H050_UNCTG Length = 229 Score = 196 bits (498), Expect = 6e-49, Method: Composition-based stats. Identities = 75/219 (34%), Positives = 118/219 (53%) Query: 4 NSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEY 63 R+K + G S L D E+L L L KDV LAKEM+ FGSL + ++ Sbjct: 11 LGHRCRLRKKFIPGGFSNLADYEILELTLTYVLPRKDVKALAKEMINKFGSLKQVFDADT 70 Query: 64 EQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIF 123 +Q G+ GI L + + Y ++ ++E+ L SP+ +++L S L+GE E F Sbjct: 71 DQLKGIKGISDYSAEFLLFLKKFISLYLSLDIKEKDRLSSPKNVKDYLISTLSGENIEKF 130 Query: 124 MVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKA 183 I L+S +RV + SGT+N + PR+I A+K A+++++AHNHP G +PS+ Sbjct: 131 YAILLNSGNRVTDCLEIESGTVNKSLLIPRKIAEIALKCRAASVVIAHNHPGGTLKPSQN 190 Query: 184 DKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 D T + K+ + +++ +LDHI+I Y SF E I Sbjct: 191 DINATVAVKKALESIEISLLDHIIISNNNYFSFKEYSLI 229 >UniRef50_A8ZTW3 DNA repair protein RadC n=5 Tax=Bacteria RepID=A8ZTW3_DESOH Length = 223 Score = 194 bits (494), Expect = 1e-48, Method: Composition-based stats. Identities = 70/219 (31%), Positives = 113/219 (51%), Gaps = 6/219 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K+ PREK+LK G + L+D ELLA+ L GT DV L++++++ LT Sbjct: 8 LKDLPPADRPREKLLKQGAAFLSDQELLAILLSKGTAKDDVFALSRKIIKIIDEKGAALT 67 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + V GIG+AK A + E RR + + P L ++ Sbjct: 68 A--QDIMAVDGIGMAKAAAICAAFEFVRRRVK---PQGLKIKFPADVLP-LIHHYADRKQ 121 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E F+ + ++ + V++ R + G +N +VHPRE+ + + ASA+I+AHNHP G P Sbjct: 122 EHFLCVSINGANEVMSVRVVSIGLINKTQVHPREVFADVLAERASAVIVAHNHPHGDLAP 181 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAER 219 S+ D +T ++ + Q + L LDHI+ Y SFAE+ Sbjct: 182 SREDIQVTRQLKDAAQTLGLTFLDHIIFNTTGYYSFAEQ 220 >UniRef50_Q73P26 DNA repair protein RadC n=2 Tax=Treponema RepID=Q73P26_TREDE Length = 225 Score = 193 bits (492), Expect = 3e-48, Method: Composition-based stats. Identities = 73/222 (32%), Positives = 121/222 (54%), Gaps = 9/222 (4%) Query: 2 KNNSQLLMP--REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLL 59 KN+S P RE++L++G L+D +L+A+ LRTG + K V LA +++ + Sbjct: 5 KNSSNTDKPDMRERLLEYGPQNLSDSDLVAILLRTGIKDKPVKELADDIILHID--RARP 62 Query: 60 TSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 + G+G +K + + EL RRYY+ + R + P LQ + Sbjct: 63 EKIEGYLRSIRGMGDSKISTVLAAMELGRRYYDNKNR---TISHPTDVVPLLQ-HYADRD 118 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 RE F+ + L+ + +I R + GT+N VHPRE+ + +K A+A+I AHNHPSG E Sbjct: 119 REHFICVSLNGANEIIATRVVSVGTINRTIVHPREVYSDPLKDRAAAIIAAHNHPSGNLE 178 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIV-IGRGEYVSFAERG 220 PS D +T+RI ++ + + +++LDHI+ + G + SF + G Sbjct: 179 PSSEDMELTKRIYEAGKILGIKLLDHIILVPNGNFFSFVQSG 220 >UniRef50_B0T9R6 DNA repair protein RadC n=4 Tax=Alphaproteobacteria RepID=B0T9R6_CAUSK Length = 253 Score = 192 bits (489), Expect = 6e-48, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 117/211 (55%), Gaps = 5/211 (2%) Query: 13 KMLKFGISALTDVELLALFL-RTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHG 71 + G+++L+D+E L L L R+ G +A +L FG L +LT++ S Sbjct: 47 RAATGGLASLSDIEALELLLSRSLANGARATAVA--LLARFGCLRRVLTADLAALSTF-- 102 Query: 72 IGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQ 131 + L+ I + ARR + + S ++L+ + ERE F V+FLD + Sbjct: 103 VDTRVGIDLQLIYDAARRLAAAELPGRCVVSSWTALIDYLKLTMAHCEREAFRVLFLDKK 162 Query: 132 HRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERI 191 +++I L GT++H V+PRE++R A++++ASA+IL HNHPSG PS AD +T+++ Sbjct: 163 NQLIADEILNHGTVDHAPVYPREVVRRALEVSASAVILVHNHPSGDQTPSSADIEMTKKV 222 Query: 192 IKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + + + + + V DH+++GR E SF G I Sbjct: 223 VDAARTLGIAVHDHVIVGRAEVASFKALGLI 253 >UniRef50_Q1MS20 DNA repair proteins n=3 Tax=Desulfovibrionaceae RepID=Q1MS20_LAWIP Length = 226 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 1/219 (0%) Query: 4 NSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEY 63 R+++ S + + ELL LFL KD LAK++L+ FGS+ G L + Sbjct: 9 LGHRARLRKRLCND-PSEMAEYELLELFLGYVHLRKDTKPLAKKLLQQFGSIRGALDAFP 67 Query: 64 EQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIF 123 + + G A A K I E+ RY +RE+ L +P++ E +++ TG E Sbjct: 68 GELETIPQFGEALSAFWKLIREIFARYAETPVREKIQLCTPKIVAEIAKARFTGCPHEEV 127 Query: 124 MVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKA 183 + +D+Q+R+I+ RL GT+ ++PR+ I +K AS IL HNHP G + S Sbjct: 128 WIATVDTQNRLISWERLSKGTIGSSPLYPRDTIEIVLKRKASGFILVHNHPGGSSNASSF 187 Query: 184 DKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 D IT + Q ++LR++DHI++ S G + Sbjct: 188 DIEITRHLEHIAQSINLRLIDHIIVTEKNCYSIRNDGLL 226 >UniRef50_Q1WT78 DNA repair protein n=3 Tax=Lactobacillus RepID=Q1WT78_LACS1 Length = 225 Score = 189 bits (481), Expect = 5e-47, Method: Composition-based stats. Identities = 60/222 (27%), Positives = 114/222 (51%), Gaps = 1/222 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 + NN +K+++FG LT+ ELL L T + K+ + L L Sbjct: 3 LTNNYSEKYITDKIIRFGAETLTNKELLQFILTTKVSQTSAKNVIKDFFDEHQRLNELQF 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 E + K A ++ + E + RY + S M ++ ++ ++ Sbjct: 63 FSDEGLKNLCKDDE-KVAIIRALREFSERYKEKEGLVLGQIFSSCMFGNYMIDKIGDSKQ 121 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E+ + + LD++++V++ + +F GTLN VHPREI + A+ + + +++AHNHPSG EP Sbjct: 122 ELLVCVCLDTKNQVLSEKVIFKGTLNSATVHPREIFKHALNFSCARILVAHNHPSGNVEP 181 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S+ D +T+R+I + + + + ++DH+++G Y+S AE + Sbjct: 182 SENDIQLTKRLINAGKMIGIELIDHVIVGSEVYLSLAEEKIV 223 >UniRef50_A5VEU8 DNA repair protein RadC n=4 Tax=Sphingomonadales RepID=A5VEU8_SPHWW Length = 230 Score = 187 bits (476), Expect = 2e-46, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 106/207 (51%), Gaps = 1/207 (0%) Query: 16 KFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVA 75 + G AL D EL+ L +D +A+ +L FG L LL+++ E + G+ Sbjct: 25 EGGPDALLDHELIEYLLALAIPRRDTKPMARALLAEFGGLGPLLSADPESLARA-GLSEG 83 Query: 76 KFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVI 135 A LK A R ++++ L + ++L++ + E V+ L+S++ ++ Sbjct: 84 VVAALKIAEASALRLLRSKVQDRPILSDWQALADYLRADMAHRAVERVRVLHLNSKNVLV 143 Query: 136 THRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSC 195 + G+++ V+ REIIR A+++ ++ALI+ HNHPSG +PS+ D +T +I + Sbjct: 144 RDELVSEGSVDQAAVYVREIIRRALELGSAALIIVHNHPSGDPQPSRQDVELTRELIAAA 203 Query: 196 QFMDLRVLDHIVIGRGEYVSFAERGWI 222 + + + + DH+V+G S G I Sbjct: 204 KPLGIAIHDHVVVGTRGQASLRALGLI 230 >UniRef50_A7GTD5 DNA repair protein RadC n=3 Tax=Bacillaceae RepID=A7GTD5_BACCN Length = 185 Score = 186 bits (474), Expect = 4e-46, Method: Composition-based stats. Identities = 62/176 (35%), Positives = 112/176 (63%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +++ + PRE+++ G S+L++ ELLA+ LRTG++ + VLTLA ++L +F L L Sbjct: 4 IRDVLKEEQPRERLISEGASSLSNRELLAILLRTGSKEESVLTLADKILRHFDGLRMLRD 63 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + E+ + +HG+GVAK +QL EL RR + + + SPE ++ ++ ++ Sbjct: 64 ATMEEITSIHGVGVAKASQLIAAFELGRRMVRLEYQHRYSIRSPEDCASYMMEEMRFLQQ 123 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSG 176 E F+ ++L+++++V+ + +F G+LN VHPRE+ +EA + A+++I HNHPSG Sbjct: 124 ENFVCLYLNTKNQVMHRQTVFIGSLNASIVHPREVFKEAFRRAAASIICLHNHPSG 179 >UniRef50_A0LNF4 DNA repair protein RadC n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LNF4_SYNFM Length = 225 Score = 186 bits (474), Expect = 4e-46, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 108/212 (50%) Query: 9 MPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSG 68 RE+ + G+S D E+L L L +DV LAK++L FGSL +L + Sbjct: 11 RLRERFGRSGLSGFHDHEVLELLLSYAIPRRDVKPLAKDLLSRFGSLAAVLDAPPAVLRN 70 Query: 69 VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFL 128 V GIG A L + EL RY R E S +L + L E E F ++ L Sbjct: 71 VPGIGPNAAALLSILPELFTRYRESRWHREETFNSTRGAVSYLSALLCTERSEKFCILAL 130 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 +S + +I + G++N V PR ++ ++K A+A+ILAHNHP G PS AD+ +T Sbjct: 131 NSTNDLIQMEEIQRGSVNRTAVFPRLVVEASLKHRATAVILAHNHPGGDPNPSAADQQLT 190 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 R+ + +D+ V DHI+I Y SFAE G Sbjct: 191 RRLKRILNDLDIIVHDHIIIAGPRYYSFAEHG 222 >UniRef50_C1SJ65 DNA repair protein radc n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJ65_9BACT Length = 221 Score = 186 bits (473), Expect = 4e-46, Method: Composition-based stats. Identities = 69/218 (31%), Positives = 112/218 (51%), Gaps = 5/218 (2%) Query: 6 QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQ 65 +++ K +L D E+L L L RG+DV AKE+LE GSL +L + Sbjct: 8 HRNRLKKRFSKE-PESLYDYEVLELLLGYVLRGRDVKPQAKELLERAGSLSAILGYDT-- 64 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREE-SPLLSPEMTREFLQSQLTGEEREIFM 124 + G+G I E R + E + PE +FL+ ++ +++E F+ Sbjct: 65 -KNIKGLGEEAQMFFGAIREFFARLGYEDIDREAVIIDKPEKAAQFLKYKIAYDKKEHFV 123 Query: 125 VIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKAD 184 +FLD +++ LF GT++ + V+PREI AI A+ +I+AHNHPSG PS+ D Sbjct: 124 ALFLDVNKKLLGFENLFKGTVDRLAVYPREIAERAITSKATHVIVAHNHPSGNMSPSETD 183 Query: 185 KLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +T+++IK+ +D+ + DHI+I + SF I Sbjct: 184 ITLTDKLIKALAALDINLADHIIITTKGFYSFKREQVI 221 >UniRef50_C4GB45 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GB45_9FIRM Length = 241 Score = 186 bits (473), Expect = 5e-46, Method: Composition-based stats. Identities = 69/221 (31%), Positives = 117/221 (52%), Gaps = 1/221 (0%) Query: 3 NNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLE-NFGSLYGLLTS 61 N P K+ + G +ALTD EL+A+ LR+GTR DVL +A+E+L SL L+ Sbjct: 21 NRYADNAPDRKLDRCGCAALTDAELIAILLRSGTRDCDVLAMAEELLRLRQHSLADLVNI 80 Query: 62 EYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEERE 121 ++ + GIG K +L+ + EL+RR + R + L + + +L E+ E Sbjct: 81 SRDELMLIPGIGPVKARELQSVFELSRRIASNTRRRKLKLTETKSIAGYYMERLRHEDSE 140 Query: 122 IFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPS 181 + + + + + ++ + G+ + + R+I A+ AS L+L HNHPSG PS Sbjct: 141 LLVAAYFNVRDELVFESVISLGSSDRTDFPIRKIFSLALTHQASQLVLLHNHPSGDPTPS 200 Query: 182 KADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +AD L T+ + Q++++ + DHI+IG +Y SF + I Sbjct: 201 QADYLATQEAKMAGQYLEIALRDHIIIGDHQYYSFRQGELI 241 >UniRef50_C9RLS9 DNA repair protein RadC n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLS9_FIBSS Length = 233 Score = 186 bits (472), Expect = 6e-46, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 110/210 (52%), Gaps = 5/210 (2%) Query: 7 LLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQF 66 LMPREK+ G+S+L++ ELLAL L +G+ V LA+ + E + + + Sbjct: 15 NLMPREKLEFSGVSSLSNEELLALILGSGSHECSVFELARRLSEFLSTETSVP--TLARL 72 Query: 67 SGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVI 126 + G+G K AQ+ EL+ R+ + P+ PE + + + E +E +VI Sbjct: 73 KSIRGLGKVKAAQILACLELSGRFILSD--KAIPVAVPEDVLSRV-AYMKYESQEHLVVI 129 Query: 127 FLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKL 186 L+S + +I L +G +N VHPRE AI+ A ++I HNHPSG EPS D Sbjct: 130 SLNSANYIIRVHELTTGLVNQTPVHPREAFALAIEDRAVSVIFVHNHPSGSLEPSPEDMS 189 Query: 187 ITERIIKSCQFMDLRVLDHIVIGRGEYVSF 216 IT + S + + + VLDHI+IG+ + S Sbjct: 190 ITRVLCASGKILQIPVLDHIIIGKSGFTSL 219 >UniRef50_A6GHT1 DNA repair protein RadC n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHT1_9DELT Length = 260 Score = 185 bits (471), Expect = 7e-46, Method: Composition-based stats. Identities = 81/217 (37%), Positives = 115/217 (52%), Gaps = 4/217 (1%) Query: 6 QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQ 65 PRE++L FG +L++ ELL G + A+ +L+ G L GL + + Sbjct: 32 AQERPRERLLLFGPKSLSETELL----ALLLGGGRAVQRAQAVLDAVGGLNGLSRACAHE 87 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMV 125 V GIG A L EL RR + + PL P FL+S L ERE FM+ Sbjct: 88 LREVIGIGDAGATALAAAVELHRRLDRLDLPMRRPLRHPREAERFLRSLLGDAEREHFMI 147 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 I LD++ RV+ R + G+L VEVHPRE+ R ++ A +L HNHPSG A PS+AD Sbjct: 148 IGLDARQRVLLVRTIAVGSLTRVEVHPREVFRPLVRAGAHTCLLVHNHPSGDARPSEADI 207 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +T R+ +F+ + VLDH+V+ +VS AE G + Sbjct: 208 ELTARMTDIGRFLGIPVLDHVVVSANGFVSLAELGLV 244 >UniRef50_Q7UL21 DNA repair protein n=4 Tax=Bacteria RepID=Q7UL21_RHOBA Length = 319 Score = 185 bits (470), Expect = 9e-46, Method: Composition-based stats. Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 9/210 (4%) Query: 18 GISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGS-LYGLLTSEYEQFSGV-HGIGVA 75 G ++L++ +LLA+ +R G G+ T ++ +F L + + + + A Sbjct: 109 GAASLSNADLLAILIRVGVVGESATTGGTKLANHFDEVLDAIREQSVSELRHITKAVTKA 168 Query: 76 KFAQLKGIAELARRY---YNVRMREESPLLSPEMTREFLQSQLTGEE----REIFMVIFL 128 + Q+ EL RR R + S E+ + +E F ++ L Sbjct: 169 SYCQIMAGIELGRRATEAARERPVPIVKITSTTEATEYCAQKFAYLAGDAVQEEFHIVTL 228 Query: 129 DSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLIT 188 D++H+ I R+ GTL+ VHPRE+ R AI+ A+A++L HNHPSG PS+ D +T Sbjct: 229 DTKHKPIRTHRITVGTLDSSLVHPREVFRPAIRDAAAAVLLVHNHPSGDPTPSREDHAVT 288 Query: 189 ERIIKSCQFMDLRVLDHIVIGRGEYVSFAE 218 ER+ ++ + + + VLDHIV+ + +S E Sbjct: 289 ERLTEAGKLIGITVLDHIVVAKQRCLSLRE 318 >UniRef50_B6AT60 DNA repair protein RadC n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AT60_9RHOB Length = 253 Score = 185 bits (470), Expect = 9e-46, Method: Composition-based stats. Identities = 64/212 (30%), Positives = 115/212 (54%), Gaps = 2/212 (0%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 RE+ G L+D E+L L L + KD +A+++L FG + L ++ + + Sbjct: 44 RERFQDHGAEHLSDAEMLELLLLHASPRKDTRPIAQKILAEFGDIASTLAADTARLEAL- 102 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 IGV+ LK + ++R R+ + S + + ++ L +E E F V+FL+ Sbjct: 103 -IGVSATQDLKLVFGASKRMAKARIAHRPLISSWDAVLTYCRTSLAHKETEEFHVLFLNR 161 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++ +I L GT++HV V+PRE+++ A+++N+ A+IL HNHPSG PS +D +T+ Sbjct: 162 RNMLIADETLGVGTVDHVPVYPREVLKRALELNSCAIILVHNHPSGDPSPSSSDIEMTKL 221 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 I ++ + + + DH++IG SF G + Sbjct: 222 IKQAADSLSITLHDHLIIGATGETSFVSEGLL 253 >UniRef50_B0PEI5 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PEI5_9FIRM Length = 230 Score = 185 bits (470), Expect = 9e-46, Method: Composition-based stats. Identities = 60/217 (27%), Positives = 108/217 (49%) Query: 6 QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQ 65 +E+ L+ G+ +L L L +D LA ++ FGSL + + +++ Sbjct: 8 HRQRLKERFLREGLDHFEPHTVLELLLFYAVPQRDTNELAHRLIARFGSLDAVFDAAFDE 67 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMV 125 V GIG LK + +L RRY + E+ L S + +FL+ + G +E+ + Sbjct: 68 LCAVEGIGRNTATLLKLVPDLTRRYLDSADHEQVLLTSVQAIGDFLRPKFLGRTKEMVFL 127 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 + L+++ + + GT++ ++ R I+ A++ A ++ILAHNHP G A PS AD Sbjct: 128 LCLNNKGGLTYGDFIAEGTIDSAPMYSRTILEAAMRSRAVSVILAHNHPHGLAVPSNADL 187 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 TE + + +R+LDH + +Y+S + G+I Sbjct: 188 AATESVCHALAAAKIRLLDHFIFAGQDYISLRDSGFI 224 >UniRef50_A7VWV8 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VWV8_9CLOT Length = 251 Score = 185 bits (470), Expect = 1e-45, Method: Composition-based stats. Identities = 68/218 (31%), Positives = 112/218 (51%), Gaps = 3/218 (1%) Query: 6 QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQ 65 REK ++ G+S+L E++ L L KD+ LA E+LE FGS LL + E+ Sbjct: 10 HRDRLREKFIRHGLSSLEPHEVVELMLYAAVPRKDMNPLAHELLEGFGSFPALLDAPIEE 69 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMV 125 GIG +K + + R Y + + S E + + S+ TG E ++ Sbjct: 70 LMKYKGIGRGSAITIKLFSAIGRFYIESKADKGP--TSMEEVIDIILSKFTGRSNEAVVL 127 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 LD + +V+ + GT N +V+ R I+ A +A+ ILAHNHPSG A PS+ D Sbjct: 128 TLLDGKGKVLYCGVVTEGTANSCDVYLRRIVGLAASYDATQAILAHNHPSGFALPSRTDL 187 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFA-ERGWI 222 T R+ ++ +++ ++DH+++ G+YVS A + G + Sbjct: 188 QTTVRVKEALALVNVTLIDHMIVADGDYVSMAQDEGKL 225 >UniRef50_D2EK65 DNA repair protein n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EK65_PEDAC Length = 225 Score = 185 bits (469), Expect = 1e-45, Method: Composition-based stats. Identities = 63/212 (29%), Positives = 106/212 (50%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 REK+ K G LT+ ELL FL + + V L++E + G + G + + Sbjct: 11 REKLTKIGAENLTNAELLRAFLSCCGQEQAVNRLSQEFWDQVGDIVGYSLLTQRERQTIF 70 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 A+ L+ EL RR + +L + ++ +E +++ LD+ Sbjct: 71 SQLPAESLALEAAIELGRRVQRQPIHLLGKVLGSAQIGNLMVARFQKNPQEHLVLLCLDT 130 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 ++++ R +F G LN EVHPREI+ E ++ +++ IL HNHPSG EPS D T++ Sbjct: 131 KNQIKQERVIFKGGLNSAEVHPREIMAEVLRYSSNGFILVHNHPSGNVEPSMNDVAFTKK 190 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + K M +R++DH+++G Y S AE + Sbjct: 191 MKKIGDLMGIRLIDHLIVGDQTYWSAAENRVL 222 >UniRef50_A2SPN1 DNA repair protein RadC n=1 Tax=Methanocorpusculum labreanum Z RepID=A2SPN1_METLZ Length = 247 Score = 184 bits (467), Expect = 2e-45, Method: Composition-based stats. Identities = 67/220 (30%), Positives = 113/220 (51%), Gaps = 5/220 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +KN + + PREK++ G +L EL+A + G G D + + K++ + S Sbjct: 31 LKNTADIDKPREKLIAKGPGSLELEELVAAIIGRGVPGCDAVQIGKKVAKILMS--RTYE 88 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 +E GV+G+G AK Q+ ELARR+ + + + E F+ Q + + Sbjct: 89 TEVNDLCGVNGMGEAKACQIIAALELARRF-PPPVHRFAVIHKAEDVLPFVH-QYRYDTQ 146 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E + + L H V+ R + G +N ++HPRE+ AI A+A+IL HNHPSG P Sbjct: 147 ENVISVTLSGAHEVLKVRLITKGLVNESQIHPREVFAGAILDRAAAMILIHNHPSGNLHP 206 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIG-RGEYVSFAER 219 SK D IT+ + + + + +++LDH++IG + S + Sbjct: 207 SKQDLKITKEMQAAGELLGIKLLDHLIIGPTDGFYSIVDE 246 >UniRef50_Q5FNC4 DNA repair protein RadC n=1 Tax=Gluconobacter oxydans RepID=Q5FNC4_GLUOX Length = 216 Score = 183 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 65/211 (30%), Positives = 111/211 (52%), Gaps = 3/211 (1%) Query: 14 MLKFGISALTDVELLALF--LRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHG 71 +L L D LL L L TG R + L+ + FGSL +L++ + + Sbjct: 7 LLTGRGRHLDDATLLHLLTVLFTG-RETGSVALSHNLFARFGSLAAVLSATDRELESISD 65 Query: 72 IGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQ 131 +G+ ++ + E A RY R+ E L + + ++L ++L E E F ++FL+ + Sbjct: 66 MGMHMLPMIRVLQEAALRYNRARLPPEDVLDNEQKLLDYLTARLARENIEQFRILFLNEK 125 Query: 132 HRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERI 191 + +I GT+NH V+PRE+ R A++I A+AL+L HNHPSG PS+AD +T ++ Sbjct: 126 NSLIADEAQARGTVNHTPVYPREVARRAVEIGATALVLVHNHPSGDPTPSEADLQMTMQV 185 Query: 192 IKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + + + + + DH +IG G + SF + Sbjct: 186 QAALEVVGVTIADHFIIGNGRHTSFRRSNLL 216 >UniRef50_D0LGP2 DNA repair protein RadC n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LGP2_HALO1 Length = 226 Score = 183 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 116/208 (55%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFS 67 +PRE+ L +G +++ ELLAL L TGTRG++VL LA+ +L G L L + + Sbjct: 11 DLPRERFLAYGGERVSNAELLALILGTGTRGRNVLELAEHLLHALGGLPQLARAAPSELL 70 Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 V GIG A+ +++ L RR + +P E L+ +L G +E+F+VI Sbjct: 71 EVPGIGAARASRVAATFHLGRRALEASAAAPVVVRNPRDLYERLRLRLRGLSQEVFLVIA 130 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 LD ++ +I + G L V+VHPRE+ R I+ A+A ++AHNHPSG PS D + Sbjct: 131 LDPRNVIIEEIEVARGCLTGVDVHPREVFRPLIRRGAAAAVVAHNHPSGDPAPSAEDIAL 190 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVS 215 T R+ ++ + + +LDH+V+G S Sbjct: 191 TRRLCEAGDLLGIPLLDHLVLGACNCAS 218 >UniRef50_A9GNT0 DNA repair protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GNT0_SORC5 Length = 259 Score = 183 bits (464), Expect = 4e-45, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 110/214 (51%), Gaps = 1/214 (0%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PRE+ L+ GI +L D +LLA+ L TG G V ++ +L F L GL + Sbjct: 31 PRERALEEGIWSLGDADLLAIVLGTGLVGTPVTLVSAALLSRFAGLEGLARLGPHALAEH 90 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+G+AK ++ EL RR + +R P+ + + +QL + E VI LD Sbjct: 91 PGLGLAKALRIAASLELGRRAFERSVRPRPPVRTSASIAAWCAAQLGPLDHEQMWVISLD 150 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 ++ + RR+ G L+ V R+I+R A+ ASAL+L HNHPSG + PS D +T Sbjct: 151 GRNGMRGARRVAQGGLHGCSVTARDILRAALSDAASALVLVHNHPSGDSAPSPEDVAMTN 210 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYV-SFAERGWI 222 + + + + + ++DH+++ + S + G I Sbjct: 211 AVAAAGEVIGVPLVDHVILAPDGHYSSLLDLGMI 244 >UniRef50_A8S889 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S889_9FIRM Length = 239 Score = 183 bits (464), Expect = 5e-45, Method: Composition-based stats. Identities = 55/221 (24%), Positives = 105/221 (47%) Query: 2 KNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTS 61 ++ RE++ +G+ +L + E L L +D +A ++++ FG +L + Sbjct: 6 RHKGHRQRMRERVQSYGLDSLAEHEALEYVLYLTNAQRDTNGIAHDLIDRFGDFAAVLEA 65 Query: 62 EYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEERE 121 E+ V G+G + L + +++R Y R + + E +L ++ + E Sbjct: 66 SEEELCTVEGVGPSTARMLHLLPQISRYYGRSRTSTTRCIKTTEQMGSYLMAKFAWSDYE 125 Query: 122 IFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPS 181 M++ LDS+ RV L GT + V + + ++ AIK A++L HNHP+G A PS Sbjct: 126 RAMLVSLDSRKRVRAAVWLREGTSDRVSLDIKNVVAAAIKGGTDAVVLCHNHPNGVALPS 185 Query: 182 KADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 D T I ++ +++ +LDH ++ EY S + + Sbjct: 186 LEDMDATGSIARALGLVNVHLLDHFILTDTEYFSMRDANRL 226 >UniRef50_C7H3R5 Putative DNA repair protein RadC n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3R5_9FIRM Length = 241 Score = 178 bits (453), Expect = 8e-44, Method: Composition-based stats. Identities = 55/219 (25%), Positives = 106/219 (48%) Query: 4 NSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEY 63 R ++ ++G+ +L E+L L KD LA +++ FG G+L + Sbjct: 9 KGHRQRMRARVEQYGLESLEPHEVLEYVLYITNTRKDTNGLAHVLMDRFGDFAGVLDASE 68 Query: 64 EQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIF 123 E V G+G + L + ++ R Y + + + + + E+L +Q G +E Sbjct: 69 EDLLTVEGVGPSTARMLHLLPQVGRYYTQCAVNGKKCMKTTDQLVEYLMAQFAGTVQERA 128 Query: 124 MVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKA 183 ++ LD + R+ L GT + V + ++++ A+K +++L HNHP+G A PS+ Sbjct: 129 LLTALDGRSRIKGLFWLRDGTSDRVSLEIKDVVAAALKGGTDSVVLCHNHPNGVALPSRE 188 Query: 184 DKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 D + TE I+++ + + + DHI++ EY S E + Sbjct: 189 DLMATENIVRALGLVKVHLRDHIILTESEYFSMREANRL 227 >UniRef50_C5V0A3 DNA repair protein RadC n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0A3_9PROT Length = 205 Score = 178 bits (452), Expect = 1e-43, Method: Composition-based stats. Identities = 69/205 (33%), Positives = 111/205 (54%), Gaps = 8/205 (3%) Query: 19 ISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFA 78 +L+ +LL + + L+ L + + H A A Sbjct: 8 AQSLSTPDLLTMLVG----KDKAQALSHTSLSVLFGMRASRQTTVVCEKQPHY---APAA 60 Query: 79 QLKGIAELARRYYNVRMREESP-LLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITH 137 + EL R + + + L +P +++L+ L G ++E+F+V+FLD+QHR+I Sbjct: 61 IISAAKELVMRALSEDITQNPINLNNPVEVKKYLKLLLGGRQQEVFVVLFLDTQHRLIAA 120 Query: 138 RRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQF 197 LF GTL V+PRE+++ A+ NA+A++LAHNHPSG AEPS+AD+L+T + ++ Sbjct: 121 EELFHGTLTQTSVYPREVVKRALMHNAAAVLLAHNHPSGLAEPSQADQLLTNALKQALAL 180 Query: 198 MDLRVLDHIVIGRGEYVSFAERGWI 222 +D+R LDH +IG +SFAERG I Sbjct: 181 VDVRALDHFIIGDESALSFAERGLI 205 >UniRef50_D1PFM8 DNA repair protein RadC n=1 Tax=Prevotella copri DSM 18205 RepID=D1PFM8_9BACT Length = 218 Score = 178 bits (451), Expect = 1e-43, Method: Composition-based stats. Identities = 68/217 (31%), Positives = 109/217 (50%), Gaps = 3/217 (1%) Query: 7 LLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFG-SLYGLLTSEYEQ 65 P+ K G+ LT VEL++L + TGT+ + A+++ SL + + E Sbjct: 2 EEFPQYKAYNNGLGNLTTVELISLVIGTGTQKN--VEQARQIFNVMEESLRNIAKARVED 59 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMV 125 V GIG +K L+ EL +RY M E L S FL + E E + Sbjct: 60 LQVVQGIGDSKAIALQAAIELGKRYSLENMAERPDLGSSLAIYNFLYPHVKDLEVEECHL 119 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 + ++ R+I H + G + V R I+REA+ NA+ L +AHNHPS PSKAD Sbjct: 120 LLMNQNFRLIKHVPMSHGGITETAVDVRRIMREAVLNNATILAIAHNHPSNSPHPSKADD 179 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++T+ + ++C M + +DH++I G Y S+ ++G + Sbjct: 180 MLTKSVKEACSIMRIFFMDHVIIADGCYFSYHDKGRL 216 >UniRef50_A6NZB7 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZB7_9BACE Length = 233 Score = 177 bits (449), Expect = 3e-43, Method: Composition-based stats. Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 1/217 (0%) Query: 6 QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQ 65 R++ + + D ++L L L +D LA ++L+ FGSL G+L + E Sbjct: 14 HRDRLRKEFMAR-PESFPDHKVLELLLFYVLPRQDTNPLAHDLLDRFGSLQGVLDAPPEA 72 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMV 125 S V G+G + + EL RRY R E + S RE + G E+ + Sbjct: 73 LSQVKGVGERAAVLFRAVKELGRRYGVSRASLEDIVDSTRAAREVFEPLFYGARNEMVYL 132 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 + +D + + + ++ G +N E++ R I+ A+ NAS +ILAHNH SG A PS DK Sbjct: 133 LCMDGKGKYLGCPKVGEGNVNAAEINARVIVEAALNHNASRVILAHNHVSGLALPSDEDK 192 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 T + + + + + ++DH++ + VS + G++ Sbjct: 193 QTTLYLRELLRQVGVILVDHLIFVDDDMVSMGDSGFL 229 >UniRef50_Q2B8H5 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B8H5_9BACI Length = 228 Score = 175 bits (445), Expect = 7e-43, Method: Composition-based stats. Identities = 56/212 (26%), Positives = 113/212 (53%), Gaps = 8/212 (3%) Query: 11 REKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVH 70 RE++ +G +L+ L + + + L+ ++ +L ++ + Sbjct: 25 RERVNYYGDQYAELADLICLIIGNKAKPEVCNLLSSMTIKELYNL------SIDELIEL- 77 Query: 71 GIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDS 130 G+ + A++ ++ M E L SPE ++ LT E++E F+V+ LD+ Sbjct: 78 GLTKQVAERFFATILFAKKINSMFMPEVECLRSPEDAYHAVK-YLTNEDQETFVVLALDT 136 Query: 131 QHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITER 190 +H++I+ + ++ GT++ VHPRE+ R A+ +A+ +I+AH HPSG PS+ D +T+R Sbjct: 137 KHQLISRKEIYKGTIDAAIVHPREVFRFALNKSAAHIIVAHQHPSGNCSPSRDDIEVTKR 196 Query: 191 IIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + K + + + + DHI++GR +Y S ++G + Sbjct: 197 LRKVGEEIGIPLSDHIIVGRNKYFSMKKQGHL 228 >UniRef50_C7JGI7 DNA repair protein RadC n=8 Tax=Acetobacter pasteurianus RepID=C7JGI7_ACEP3 Length = 249 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 3/203 (1%) Query: 23 TDVELLALFLRTGTRG-KDVLTLAKEMLENFGSLYGLLTS--EYEQFSGVHGIGVAKFAQ 79 TD+ LL + A+ +L +GS ++ + +E + + A Sbjct: 47 TDLALLCRLIAQAQPRNAKAQEQARNLLHEYGSFSAVMAAISWHEPSKSIKALPEAVRVL 106 Query: 80 LKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRR 139 L E R R+R L +L++ + E+RE V+FL+ +H ++ Sbjct: 107 LMLAREAGLRIQRARLRRSGILADSTQLYAYLRAVMGPEKREQVRVLFLNDKHELLADDV 166 Query: 140 LFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMD 199 + GT++H V+PREI+ A+++NA+ L+L HNHPSG PS D ++T +I + + M+ Sbjct: 167 MGQGTVDHTPVYPREIVARALQLNATMLVLVHNHPSGDPTPSADDVVMTTQICGAAKIMN 226 Query: 200 LRVLDHIVIGRGEYVSFAERGWI 222 + V DHI++ + +S E G++ Sbjct: 227 IHVWDHIIVAGEKLLSMREAGFL 249 >UniRef50_C0EH16 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EH16_9CLOT Length = 226 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 54/218 (24%), Positives = 101/218 (46%), Gaps = 1/218 (0%) Query: 6 QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQ 65 R++ ++ G+ + L L L D LA +L+ FGS G+L ++++ Sbjct: 9 HRQRLRKRFVQEGLDSFEVHNALELLLFNSIPRGDTNELAHILLDTFGSFSGVLDADHDN 68 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMV 125 V G+G L+ I EL R Y + + + E + + G +E Sbjct: 69 LLKVKGVGERTATLLELIPELCRLYMEDKAKPHKTYNTTEALCDLFIPKFIGRTQECVYA 128 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 D+ ++I + L GT + V +EI++ A NA+ + +AHNHP G PS +D Sbjct: 129 ACFDNASKLIACQMLAKGTADTVLFPVKEIVQFACNRNAANVAIAHNHPMGLCNPSSSDV 188 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGE-YVSFAERGWI 222 + + ++ + + +R++DHI++G+ +S E G + Sbjct: 189 TNSTDLKETLRKIQIRLVDHIIVGKNGDALSLVEYGVL 226 >UniRef50_C0R372 DNA repair protein RadC, putative n=11 Tax=Wolbachia RepID=C0R372_WOLWR Length = 218 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 54/210 (25%), Positives = 109/210 (51%), Gaps = 2/210 (0%) Query: 13 KMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGI 72 ++L+ AL D E++ FL +AK ++ + + +L E + + G+ Sbjct: 11 RILESKGKALLDREIMETFLSAVHESPQAQEIAKNLVNTYTGVGRILGREMDDLKVIEGV 70 Query: 73 GVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQH 132 + A + + E R +++ E P++ + E+L + ERE +++L+ + Sbjct: 71 TDSAVAMIMCVKETLERVLKEKLKSE-PIMDLQGIVEYLNVSIGHSERECVKILYLNKRR 129 Query: 133 RVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERII 192 ++I + G + V+ +EI R+A+ NA+++I++HNHP G EPS+ D+ +T+ + Sbjct: 130 QLIGEES-YIGEMEKAPVYIKEITRKALMKNATSIIMSHNHPGGSLEPSEEDQAVTKSLA 188 Query: 193 KSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +C + +++ DHI+I G Y SF E G + Sbjct: 189 AACSTVSVKLFDHIIITSGGYFSFRENGLL 218 >UniRef50_C7NDB9 DNA repair protein RadC n=4 Tax=Fusobacteriaceae RepID=C7NDB9_LEPBD Length = 240 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 62/222 (27%), Positives = 116/222 (52%), Gaps = 1/222 (0%) Query: 2 KNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTS 61 + R++ L G D ELL L L K+ +AK +L+ +G LY +L Sbjct: 19 QEKGHRERLRQRFLSTGTKGFLDYELLELLLTYTVIRKNCRGIAKNLLKKYGDLYTILQQ 78 Query: 62 EYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESP-LLSPEMTREFLQSQLTGEER 120 E+ + LK ++E+ ++ + + S +L+ L + Sbjct: 79 SEEELQKNKYMTERTVVFLKLLSEIIENGLYKKIHNKKISITSNIKLLNYLKCSLLKRDI 138 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E+F V+FL++Q+ ++ LF GT++ ++ RE+I++ ++ NA ++IL HNHP+G +P Sbjct: 139 EVFKVLFLNTQNELMKEEELFYGTIDRSTIYIRELIKKILEYNAKSVILVHNHPAGSLKP 198 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S +D L+T+++ + + M++R+LDH++I Y SF E G + Sbjct: 199 SDSDILLTKKVKEVFESMEIRLLDHLIISEQGYFSFLEGGIL 240 >UniRef50_A4J365 DNA repair protein RadC n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J365_DESRM Length = 231 Score = 173 bits (439), Expect = 3e-42, Method: Composition-based stats. Identities = 52/161 (32%), Positives = 92/161 (57%) Query: 62 EYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEERE 121 E+ GIG + A+L L ++ + E + + PE ++++ ++E Sbjct: 71 SKEELMTYPGIGPSMAARLMAAFALTKKLASAGASENTVIRCPEDIFYLMKNEAKLLDKE 130 Query: 122 IFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPS 181 F + L++++ VI + GTLN VHPRE+ ++AI+ +A+A+IL HNHPSG PS Sbjct: 131 YFSALLLNTKNHVIGKETISIGTLNSSMVHPRELFKQAIRRSAAAVILVHNHPSGDPTPS 190 Query: 182 KADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 + D +T+R+I++ + + + VLDHIV+G ++ S +G I Sbjct: 191 REDISLTKRLIEAGEIIGIDVLDHIVLGFDKFTSLKSKGLI 231 >UniRef50_D1PL34 DNA repair protein RadC n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL34_9FIRM Length = 244 Score = 173 bits (439), Expect = 4e-42, Method: Composition-based stats. Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 4/225 (1%) Query: 2 KNNSQLLMPREKM----LKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYG 57 K R +M + G+ +L + E L L +D LA ++++FG Sbjct: 5 KARPLHEKHRARMQVRVERDGLDSLAEHEALEYLLFLAIPRQDTNELAHRLIQHFGDFCK 64 Query: 58 LLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTG 117 ++ ++ E+ V GIG + + R Y + + L E E+++ G Sbjct: 65 VMEADPEELKQVKGIGEKSARLISTVTAFGRYYALKKRKHRVALNHTEAAVEYVKPLFLG 124 Query: 118 EEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGC 177 + E+ +I LD + + R+ G N V + R+++R+ + +A+ ILAHNHP+G Sbjct: 125 LQNELLYLILLDDKCCPVRDLRIAEGVPNRVHIDTRKLLRDVARTDATCGILAHNHPTGL 184 Query: 178 AEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 PS+AD + T I+K+ + + V+DHI++ + S RG + Sbjct: 185 PLPSEADVIATVGIMKALDPLGVSVIDHIIVAGEDSCSMRARGCL 229 >UniRef50_C9BR87 DNA repair protein RadC n=4 Tax=Enterococcus faecium RepID=C9BR87_ENTFC Length = 223 Score = 173 bits (439), Expect = 4e-42, Method: Composition-based stats. Identities = 61/176 (34%), Positives = 99/176 (56%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K +PRE+M +G AL+D ELLA+ LRTG V+++A +L+ FG L L Sbjct: 6 IKEVPTSSLPRERMEIYGAEALSDQELLAILLRTGQHPYSVMSIAGNLLKTFGGLASLRQ 65 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 + + + GIG K ++K + EL RR R P+ + + L ++ ++ Sbjct: 66 ATLHELEEIRGIGRVKAIEIKALIELGRRIQTDHERAAPPVRTSYELAQQLILEMKDHKQ 125 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSG 176 E + I+LD++++VI + +F G+LN HPREI A++ A+ ++LAHNHPSG Sbjct: 126 EHLVCIYLDTKNQVILKKTVFIGSLNQSVAHPREIFHYAVRYCAARIVLAHNHPSG 181 >UniRef50_Q03EP2 DNA repair protein n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03EP2_PEDPA Length = 219 Score = 173 bits (438), Expect = 6e-42, Method: Composition-based stats. Identities = 59/219 (26%), Positives = 106/219 (48%) Query: 4 NSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEY 63 + K+ K G L++ EL+ FL + + + + L + G + G Sbjct: 1 MEIQDEAKAKLKKVGAENLSNEELVRAFLDSFGQSQKINQLTNHFWDTIGDIAGYGLLSQ 60 Query: 64 EQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIF 123 + + L+ EL RR + +L + + S+ E +E Sbjct: 61 NEKRKIFKNIPDATVALEAGIELGRRIQKQPIHLLGKVLGSAQLGQMMVSRFQKEPQEHL 120 Query: 124 MVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKA 183 +V+ LD+++++ +F G LN EVHPREI+ E ++++A++ +L HNHPSG EPS Sbjct: 121 LVLCLDTKNQIKREIVVFKGGLNSAEVHPREIMVEVLRVSANSFVLIHNHPSGNIEPSTN 180 Query: 184 DKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 D T+++ K M +R++DH+++G Y S AE+ +I Sbjct: 181 DLAFTKKMKKVGDLMGIRLIDHLIVGDQSYWSAAEKRFI 219 >UniRef50_B8H0Z9 DNA repair protein radC n=1 Tax=Caulobacter crescentus NA1000 RepID=B8H0Z9_CAUCN Length = 221 Score = 172 bits (436), Expect = 8e-42, Method: Composition-based stats. Identities = 62/177 (35%), Positives = 96/177 (54%) Query: 4 NSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEY 63 RE+ K G AL D EL+ LFL DV LAK +L FGSL G+L + Sbjct: 39 LGHRERLRERAAKGGFVALPDYELIELFLFRTFPRGDVKPLAKALLTRFGSLDGVLGATV 98 Query: 64 EQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIF 123 E+ V G+G A LK + E+A R ++ + + S +++ L E RE F Sbjct: 99 EELRTVQGVGEAAAMDLKLLHEVALRAGRDKIAKRPVISSWSALLAYVRVALANESREQF 158 Query: 124 MVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 V+FLD ++++I L GT++H V+PRE++R A+++++S +I+ HNHP+ P Sbjct: 159 RVLFLDKKNQLIADEVLNRGTVDHAPVYPREVMRRALELSSSNIIILHNHPTCPLSP 215 >UniRef50_C1QC41 DNA repair protein n=2 Tax=Brachyspira RepID=C1QC41_9SPIR Length = 227 Score = 172 bits (436), Expect = 8e-42, Method: Composition-based stats. Identities = 57/208 (27%), Positives = 112/208 (53%), Gaps = 1/208 (0%) Query: 15 LKFGISALTDV-ELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIG 73 L+F + L D ++LA + G + T+ ++ +F +LY ++ + ++ V G+ Sbjct: 10 LQFSNADLVDEKQILASIISNGISLERANTIVDKLYYSFYNLYNIVNASDKELLRVKGLN 69 Query: 74 VAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHR 133 K +K I + Y ++ ++P +L +L + E F ++ LD + Sbjct: 70 DKKIKLIKSIPSILEYYLLSSLKADTPNFKKRDLINYLIIKLGKLKFETFSIVCLDVNKK 129 Query: 134 VITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIK 193 I+ +F GT++ ++PR+++ +++ + +S +I++HNHPSG A+PSK D IT + K Sbjct: 130 FISMEHIFRGTIDSATIYPRDLVEKSLSLGSSYVIVSHNHPSGIAKPSKEDINITNVLYK 189 Query: 194 SCQFMDLRVLDHIVIGRGEYVSFAERGW 221 + + +D+++LDHI+I Y SF E G Sbjct: 190 AFKMVDIKMLDHIIIAANSYYSFREDGM 217 >UniRef50_C0R3D5 DNA repair protein RadC n=2 Tax=Wolbachia RepID=C0R3D5_WOLWR Length = 219 Score = 172 bits (436), Expect = 9e-42, Method: Composition-based stats. Identities = 59/222 (26%), Positives = 119/222 (53%), Gaps = 3/222 (1%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 M N+ + ++L +L D ELL L G+ +AK+++E F SL ++ Sbjct: 1 MNNSERKEKLETRILSSRGRSLLDHELLERTLSECEEGR---EVAKKLIELFSSLGRVIN 57 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 +++ + V G+ A + + E+ R ++++ S L + E ++ ++ + + Sbjct: 58 ADFHELKNVTGMNDGAIASIFCLKEIFDRILKGKLKKLSILDNREELLKYFKTAIGQSRK 117 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E VI+LD +I GT++ V ++ REII++ + I+AS++ ++HNHPSG EP Sbjct: 118 ESLRVIYLDRSGHLIYEYIQDCGTIDRVPLYVREIIKQGLLIDASSIAISHNHPSGDTEP 177 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 SK D+ T + +C+ + ++++DHI++ + + SF + G + Sbjct: 178 SKEDEDNTLTLAATCENVGMKLIDHIIVTQKSHFSFYDSGLL 219 >UniRef50_B0MUL4 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MUL4_9BACT Length = 214 Score = 171 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 68/211 (32%), Positives = 113/211 (53%), Gaps = 5/211 (2%) Query: 13 KMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGS-LYGLLTSEYEQFSGVHG 71 K+L G+ LTD ELL L L G D LA +L +F L L ++ + G Sbjct: 7 KLLSRGVETLTDQELLELLLDDG----DSERLAGALLSSFEGRLAALGYADIARLRMAAG 62 Query: 72 IGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQ 131 IG+ + A+++ EL RR R P+ S + LT + E ++L++ Sbjct: 63 IGLKRAARIQAAVELGRRVLAARELGPDPIGSSNDVVRIFRPLLTEMKHEECWCLYLNTG 122 Query: 132 HRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERI 191 +R++ +R+ G + V R +I+ A+++ A+ +IL HNHPSG A PS+ DK++T++I Sbjct: 123 NRIVERQRVSQGGVQATVVDHRLVIKRALELLATQIILVHNHPSGAALPSEQDKILTKKI 182 Query: 192 IKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++ D+R+LDH++I RG SF + G + Sbjct: 183 AEAAALFDIRLLDHLIIARGGEYSFRQSGLL 213 >UniRef50_B6JJV2 DNA repair protein RadC n=5 Tax=Alphaproteobacteria RepID=B6JJV2_OLICO Length = 205 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 50/169 (29%), Positives = 94/169 (55%) Query: 6 QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQ 65 R++ + G AL+D ELL + L +DV LAK ++ FGS + + + Sbjct: 23 HRERLRDRFREAGPDALSDYELLEMVLFRALPRRDVKPLAKALITRFGSFAEAVHAPEAR 82 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMV 125 V G+G A ++K IA A R ++++ + L S ++ ++ + ++E F + Sbjct: 83 LKEVSGLGDAAITEMKLIAATASRVAKGQVKQRTMLSSWASVIDYCRATMAFSDKEQFRI 142 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHP 174 +FLD ++++I GT++H V+PRE+++ A++++A+A+IL HNHP Sbjct: 143 LFLDKRNQLIADELQQVGTVDHTPVYPREVVKRALELSATAIILVHNHP 191 >UniRef50_A0Z2T6 DNA repair protein RadC n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z2T6_9GAMM Length = 223 Score = 170 bits (431), Expect = 3e-41, Method: Composition-based stats. Identities = 75/201 (37%), Positives = 115/201 (57%), Gaps = 7/201 (3%) Query: 23 TDVELL--ALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQL 80 +D +LL AL L GT +A M ++ GSL+ + S + G+G + QL Sbjct: 24 SDADLLSAALGLPDGTA-----AVANYMSQHRGSLFESIASLLNCDIPLTGVGRQRRYQL 78 Query: 81 KGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRL 140 LA R + E SPL P ++LQ + RE+F +FLD+Q +++ R + Sbjct: 79 SCALLLATRLAEEELFERSPLKDPGSCYKYLQHHYLLQSREVFTCLFLDTQRQLLACRDM 138 Query: 141 FSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDL 200 F GTLN V+PREI+ A+K+ ASA+I+AHNHPSGC PS AD +T+R+ ++ +D+ Sbjct: 139 FFGTLNTAPVYPREIVAMALKMGASAIIVAHNHPSGCLAPSVADIQLTDRLRRALGLIDI 198 Query: 201 RVLDHIVIGRGEYVSFAERGW 221 +LDH+++ +G Y+S A G Sbjct: 199 DLLDHLIVAQGRYLSMASEGL 219 >UniRef50_C9M9H6 DNA repair protein RadC n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9H6_9BACT Length = 229 Score = 169 bits (428), Expect = 6e-41, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 5/214 (2%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K Q PRE++ + G S L+DVELLA+ +RTGT + VL LA +L FG L + Sbjct: 8 LKQLPQSSRPRERLCRLGASGLSDVELLAVLIRTGTAAQGVLELAGSLLAEFGGLRAMAQ 67 Query: 61 SEYEQF-SGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE 119 + + + G+G AK A L EL RR N + PL + ++ QL E Sbjct: 68 ASPSELVQSIGGMGEAKAAALLAAFELGRRSSNEQ-EGLPPLKAW--LADW-ACQLRPEA 123 Query: 120 REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAE 179 RE + F D Q R++ RL G + + ++R A++++ + L HNHP +E Sbjct: 124 REFVVAGFFDDQDRLLGDERLSYGGPDGAALDMPYLLRRAVRLDCRGVALLHNHPDRVSE 183 Query: 180 PSKADKLITERIIKSCQFMDLRVLDHIVIGRGEY 213 PS D+ +T+ + + +++R + H +I G Sbjct: 184 PSMEDRKLTDYLACRLELLNIRFIGHFLIVGGRV 217 >UniRef50_A9AE97 DNA repair protein n=8 Tax=Bacteria RepID=A9AE97_BURM1 Length = 169 Score = 169 bits (428), Expect = 7e-41, Method: Composition-based stats. Identities = 63/159 (39%), Positives = 103/159 (64%) Query: 64 EQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIF 123 G + A I E AR+ + +M+ SP +++L+++L G E E+F Sbjct: 11 APLMLRDSRGRYRQASADQILEAARQVIDQKMQRGDEFTSPAAVKDYLRAKLAGFEHEVF 70 Query: 124 MVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKA 183 V+FLD++HR+I + +F GT++ EVHPRE+++EA+++NA+A+I++HNHPSG EPS A Sbjct: 71 AVLFLDTRHRLIDYAEMFRGTIDSAEVHPREVVKEALRLNAAAVIISHNHPSGNPEPSAA 130 Query: 184 DKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 D+ +T ++ ++ +D+R LDHI++ G SFAERG I Sbjct: 131 DRAMTSQLRQALALVDVRTLDHIIVAGGTTTSFAERGLI 169 >UniRef50_Q2GEH3 DNA repair protein RadC n=2 Tax=Neorickettsia RepID=Q2GEH3_NEOSM Length = 236 Score = 168 bits (427), Expect = 9e-41, Method: Composition-based stats. Identities = 58/219 (26%), Positives = 113/219 (51%) Query: 4 NSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEY 63 L R+++++ ++++ELL L D+ LAK +L+ FG L ++ Sbjct: 18 KGHRLRLRQRIIQDTAGTISELELLEYLLFGTHPRIDIKPLAKSLLKEFGDFKKLFAADP 77 Query: 64 EQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIF 123 + V+G+ A A ++ + E + + + L S + ++L+ + + E Sbjct: 78 DDLRSVNGVSDAVVALIRTVRESMKAILRKDLTSRTTLKSWKSVVDYLRLSIGNKPVETI 137 Query: 124 MVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKA 183 V+FL+ ++ +I G +H + REII++ + ASA+++AHNHPSG PS+ Sbjct: 138 RVLFLNKKYTLIREYVQELGAADHTPLCMREIIKKCLTCGASAMVIAHNHPSGNPLPSQE 197 Query: 184 DKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 D LIT ++ K CQ +D++++DH ++ ++ SF G + Sbjct: 198 DLLITGKLKKICQKVDVQLVDHFIVTPHDHFSFVVNGLL 236 >UniRef50_C0GE80 DNA repair protein RadC n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GE80_9FIRM Length = 189 Score = 168 bits (425), Expect = 1e-40, Method: Composition-based stats. Identities = 53/178 (29%), Positives = 97/178 (54%), Gaps = 2/178 (1%) Query: 45 AKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSP 104 + + + + SL L + ++ V G+G K QLK + +L++ + SP Sbjct: 14 MEYIAKEYPSLKQLSHATEKELLRVPGLGPRKAKQLKAVFDLSKALLEPD-DTSITIQSP 72 Query: 105 EMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINA 164 E + L E E + +FL+++++++ H + GTLN +HPRE+ AI+I Sbjct: 73 ADVFENFK-YLALHEEEYLVALFLNTKNKILQHTTISKGTLNTSLIHPREVFAPAIRIKC 131 Query: 165 SALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +++++ HNHPSG PS+ D IT+R+ ++ + + + +LDHIVIG +VS E+ + Sbjct: 132 ASVVILHNHPSGDPTPSREDIDITKRLKEAGKIIGIELLDHIVIGNKGFVSLREKSLL 189 >UniRef50_B1ZYU3 DNA repair protein RadC n=3 Tax=Verrucomicrobia RepID=B1ZYU3_OPITP Length = 199 Score = 166 bits (421), Expect = 4e-40, Method: Composition-based stats. Identities = 64/171 (37%), Positives = 98/171 (57%) Query: 4 NSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEY 63 + P+E++ +FG +AL+D ELLA+ LR+GT G+DVLTLA ++ GSL GL+ + Sbjct: 1 MAVGDRPQERLEQFGPTALSDTELLAMLLRSGTHGQDVLTLATRLIAEAGSLAGLIAWKE 60 Query: 64 EQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIF 123 F + GIG K QL + E+A+R + E L ++ + L G + E F Sbjct: 61 SDFRRLKGIGRVKALQLVTVVEIAKRVLIQKSEESPVLNRADLVADHLFPLARGLQVEKF 120 Query: 124 MVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHP 174 V+ L+ ++R++ + SGT HPRE+ REAI+ +ASA+I AHN Sbjct: 121 WVLCLNRKNRLLRRVEVTSGTATAALAHPREVFREAIRESASAVICAHNLC 171 >UniRef50_D1Y6L3 DNA repair protein RadC n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y6L3_9BACT Length = 239 Score = 166 bits (421), Expect = 5e-40, Method: Composition-based stats. Identities = 65/218 (29%), Positives = 104/218 (47%), Gaps = 11/218 (5%) Query: 3 NNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSE 62 + PRE+++ G AL ELLA+ TG G +V+ +++E+L +GSL L + Sbjct: 4 EMNASERPRERLVTRGPEALKTEELLAILFGTGREGCNVIEMSRELLNKYGSLKNLSRAH 63 Query: 63 YEQFSG-------VHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQL 115 + +G V GIG+AK L EL RR R S + +F QL Sbjct: 64 ALELAGRNRPYDGVKGIGLAKAVTLLAALELGRRATGEEERR----DSLKSRLDFWTMQL 119 Query: 116 TGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPS 175 + +ERE + I+LD + I RL G ++ + ++R A+++N +AL L HNHP Sbjct: 120 SADEREFIIAIYLDRKDVPIADERLSYGGVDGAMLDAPYLMRRAVRLNCAALALVHNHPD 179 Query: 176 GCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEY 213 G PS D ++ + + Q + + H + G G Sbjct: 180 GDLTPSDDDLFLSRSVARMLQVLQIGYYGHYIAGGGRI 217 >UniRef50_B0MNH0 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MNH0_9FIRM Length = 228 Score = 166 bits (420), Expect = 5e-40, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 99/216 (45%), Gaps = 4/216 (1%) Query: 11 REKML----KFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQF 66 RE+M+ +FG ELL + L + + D +A +++ FG+L G+ ++ + Sbjct: 6 RERMISRLKEFGSEGFQSHELLEMMLYSSFKQCDTNPIAHRLIDRFGTLSGVFSASENEL 65 Query: 67 SGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVI 126 V G+G + + + R +++ L + +++ + E +I Sbjct: 66 CEVEGVGRSTAQMIIVLRANIERMLAESVQKGEMLGASGAVKDYCMGLFRFVDTEQLRMI 125 Query: 127 FLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKL 186 FLDS++ ++ + +G L V ++ +A++ +++ HNHP G PS DK+ Sbjct: 126 FLDSEYCFMSQEIISTGALEQVRPDIMRLLEKAVQKRCPIVVMTHNHPRGSEMPSTEDKI 185 Query: 187 ITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +T + + + + DH+++G +S E G + Sbjct: 186 MTRNLFNLLEKAGIYLADHVIVGMHGSLSMRENGIL 221 >UniRef50_B4RG10 DNA repair protein RadC n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RG10_PHEZH Length = 256 Score = 165 bits (417), Expect = 1e-39, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 2/204 (0%) Query: 19 ISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFA 78 + L+D EL+A + R +D A+ LE+ G L L + IG Sbjct: 54 AAQLSDAELVARVIDPRRRSRDSEARARLCLESCGGLGPALALADPRLER--QIGAEACL 111 Query: 79 QLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHR 138 QL+ + E + R + + + T ++L++ L E RE F VIFLD+ + Sbjct: 112 QLRLVREASIRTTRGAVISRRFDANAKRTHDYLRALLEFETRESFRVIFLDASGAWSSDE 171 Query: 139 RLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFM 198 L GT++H V+ RE++REA++ +A+AL+L HNHPSG PS AD +T I + + Sbjct: 172 ELGRGTVDHAPVYVREVMREALRRDAAALVLVHNHPSGDPTPSAADVQVTSEIAAAASAL 231 Query: 199 DLRVLDHIVIGRGEYVSFAERGWI 222 + V DH+V+G SF G + Sbjct: 232 GMSVKDHLVVGSHGVASFQALGLL 255 >UniRef50_D1AWS8 DNA repair protein RadC n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AWS8_STRM9 Length = 211 Score = 165 bits (417), Expect = 1e-39, Method: Composition-based stats. Identities = 60/203 (29%), Positives = 106/203 (52%), Gaps = 7/203 (3%) Query: 24 DVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGI 83 D ELL + K A E+++ +G + +L E F + + + +K + Sbjct: 12 DFELLLNLIELVENRKIAKLQASEIIKKYGGISNILR---EDFKVIENMNILSKKTMKIL 68 Query: 84 AELA----RRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRR 139 ++ +N EE + E ++L+ Q ERE+F V++ ++++ +I Sbjct: 69 ENVSLIYNHILFNECFGEEKKISCFEDLVKYLKFQYVDMEREVFKVLYFNTKNVLIKDEN 128 Query: 140 LFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMD 199 +F GT++ V+ REI++ +K NA ++I+ HNHPSG EPS D+ +T++II + +D Sbjct: 129 IFYGTIDKSVVYVREIVKNILKYNAKSIIIVHNHPSGNLEPSNDDRCLTKKIIDVLKLID 188 Query: 200 LRVLDHIVIGRGEYVSFAERGWI 222 +R+ DHI+I Y SF E G I Sbjct: 189 VRLSDHIIISNKGYYSFLENGQI 211 >UniRef50_A1K759 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=A1K759_AZOSB Length = 196 Score = 163 bits (414), Expect = 3e-39, Method: Composition-based stats. Identities = 68/204 (33%), Positives = 108/204 (52%), Gaps = 15/204 (7%) Query: 19 ISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFA 78 +AL D LL F G +DV GS ++ E + Sbjct: 8 PTALADAALLERFF--GPEAEDVWEGCD------GSWSKVVELAREPRTPAWD------- 52 Query: 79 QLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHR 138 L E+ R + ++ + L SP + R+FL++ G+ EIF+V++LD+Q+R+I Sbjct: 53 ALACAIEILHRSFAEQLSARNVLDSPGVVRQFLRTFFEGKPYEIFVVLYLDAQNRLIRAE 112 Query: 139 RLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFM 198 F GTL V+PREI+R +++++A+ +I +H HPSG EPS AD+++T + + + Sbjct: 113 EAFRGTLTQTSVYPREILRRSLELHAAGVIFSHQHPSGVCEPSSADEVLTNMLKSALTLV 172 Query: 199 DLRVLDHIVIGRGEYVSFAERGWI 222 D+RVLDHIV+ VSFAE G + Sbjct: 173 DVRVLDHIVVAGDRAVSFAETGRL 196 >UniRef50_Q2S8K4 DNA repair protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S8K4_HAHCH Length = 207 Score = 162 bits (410), Expect = 9e-39, Method: Composition-based stats. Identities = 65/171 (38%), Positives = 102/171 (59%), Gaps = 4/171 (2%) Query: 56 YGLLTSEYEQFSGVHGIGVAK---FAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQ 112 + + +Q +H G + I +A+ + R P+ T+ +L Sbjct: 35 RSYMNEDVQQHYSIHEDGSYQFNQAIHPDKIISIAKHILDGRFFRGKAFCDPDATKYYLV 94 Query: 113 SQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHN 172 QL E+E+F +FLD+Q+R+I+ +LF GT++ V+PREI++ A+ +NA+A+ILAHN Sbjct: 95 LQLAEHEQEVFACMFLDNQNRLISFEKLFYGTIDQASVYPREIVKRALMLNAAAVILAHN 154 Query: 173 HPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIG-RGEYVSFAERGWI 222 HPSG +EPS AD +T+ + S +D+RVLDHIV+G G VSF ERG++ Sbjct: 155 HPSGMSEPSVADIAMTKTVKSSLALIDVRVLDHIVVGSDGSSVSFIERGYM 205 >UniRef50_A9HJN5 DNA repair protein RadC n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HJN5_GLUDA Length = 221 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 88/171 (51%) Query: 52 FGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFL 111 FG++ + ++ + + + + + E A R R+R+ L + +L Sbjct: 51 FGTIGAVFAADPAELASAVAGRLQIRVIVPLLREAAIRLMRARIRQGDLLSCHDALMAYL 110 Query: 112 QSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAH 171 Q+ L + E F V+FLD R+I L GT++ V+PRE++R AI++ AS LIL H Sbjct: 111 QASLARDTVEQFRVLFLDRGTRLIADEVLAQGTIDQTPVYPREVMRRAIQLKASELILVH 170 Query: 172 NHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 NHP PS+ D +T R+ + + L V DH+++G G +SF + G + Sbjct: 171 NHPGWNPTPSREDIAMTRRLAQIATVLGLTVRDHVIVGNGASISFRQAGLL 221 >UniRef50_Q03R16 DNA repair protein n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03R16_LACBA Length = 220 Score = 160 bits (405), Expect = 3e-38, Method: Composition-based stats. Identities = 57/177 (32%), Positives = 86/177 (48%), Gaps = 1/177 (0%) Query: 46 KEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPE 105 + + F S+ + + + Q + A L I EL R +L+ Sbjct: 31 QRFFQYFHSVAAVRYASHRQQRAYISGNRQRQALLTAI-ELGRWAEKAPRPILGEVLASS 89 Query: 106 MTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINAS 165 + L L +E V+ LD+QHR+I + +F GTLN VHPREI R A+ A+ Sbjct: 90 QLGQVLMDDLRYLLQEQLEVLALDAQHRIIERQTVFQGTLNSCPVHPREIFRVAVMSGAA 149 Query: 166 ALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +I+AHNHPSG +PS +D+ +R+ Q M + +LD V+G Y SF E G + Sbjct: 150 TVIVAHNHPSGQPQPSTSDRAFMQRLAACGQLMGIPLLDGFVVGLHSYFSFKEAGIL 206 >UniRef50_C1TLK8 DNA repair protein radc n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TLK8_9BACT Length = 214 Score = 160 bits (405), Expect = 4e-38, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 113/207 (54%) Query: 4 NSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEY 63 ++ +PRE++ + G +AL DVELLA+ LRTG G+DVL L++ +L+ FG L GL + Sbjct: 1 MTEDQLPRERLFRNGATALNDVELLAILLRTGGGGEDVLGLSESILDGFGGLGGLTRASV 60 Query: 64 EQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIF 123 +++ GIG AK A L E+ RR R+ S LS + +Q +L+ E RE Sbjct: 61 KEYLSFKGIGGAKAASLAAAVEIGRRLAIYNGRDPSRPLSWRDELKDIQVRLSDEPREFI 120 Query: 124 MVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKA 183 + IFL + R ++ + G + + R +R A++++A ++L HNHP G E S Sbjct: 121 VAIFLGDRERFLSKEMISFGGPDGASLDIRHFMRVAVRLDAYGVVLVHNHPDGSLESSAE 180 Query: 184 DKLITERIIKSCQFMDLRVLDHIVIGR 210 D+ +T + + + +R H ++ R Sbjct: 181 DRTLTRIVRERLDALGIRFHGHYIVSR 207 >UniRef50_B1I0K4 DNA repair protein radC-like protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1I0K4_LYSSC Length = 204 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 47/166 (28%), Positives = 87/166 (52%), Gaps = 1/166 (0%) Query: 57 GLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLT 116 L + + G+ + +++ + L + + R + + + E++ ++ Sbjct: 40 DLFDMTIVELQDI-GLSRKEALRIRAVKGLLKIMNSERQGKVKSISNASEAAEYVMDEMK 98 Query: 117 GEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSG 176 ++E F+ +FLD++ RVI +F G+LN PREI+R A+K +A+ +I HNH SG Sbjct: 99 NLKQEHFVCLFLDTRSRVIKKETIFIGSLNSSIASPREIMRLALKYSAAGIICLHNHCSG 158 Query: 177 CAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +EPS D +T R+ ++ M + ++DHIVIG E+ S E + Sbjct: 159 DSEPSMQDLEVTRRLFEAGDLMGVELIDHIVIGNNEFTSIRENNLL 204 >UniRef50_P52140 UPF0758 protein yfjY n=148 Tax=Enterobacteriaceae RepID=YFJY_ECOLI Length = 160 Score = 158 bits (400), Expect = 1e-37, Method: Composition-based stats. Identities = 55/122 (45%), Positives = 91/122 (74%) Query: 101 LLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAI 160 S + R++L+ ++ G ERE FM+++L+ Q+++I H LF+G+++ EVHPRE+++ A+ Sbjct: 39 FTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRAL 98 Query: 161 KINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 NA+A+ILAHNHPSG PS+ADK IT+R++++ Q +D+RV DH+++G + SFAE G Sbjct: 99 YFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHG 158 Query: 221 WI 222 + Sbjct: 159 LL 160 >UniRef50_C8U0Q3 Predicted DNA repair protein n=21 Tax=Enterobacteriaceae RepID=C8U0Q3_ECO10 Length = 180 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 62/157 (39%), Positives = 100/157 (63%), Gaps = 3/157 (1%) Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMV 125 G+ ++ L +Y S R++L+ L +ERE+FMV Sbjct: 27 LPTTSGLTPYAQRTIRRAMNLLDKYLRQP---GIAFTSSTAARDWLRLHLARQEREVFMV 83 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 ++LD+QHR++ LF+G++NHV+VH RE+++ A++ NA+A++LAHNHPSG EPS+ D+ Sbjct: 84 LYLDNQHRLLESETLFAGSVNHVQVHSREVVKSALRFNAAAVVLAHNHPSGDPEPSQCDR 143 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 IT R+ ++ + +D++ LDH+V+GR VSFAERGW+ Sbjct: 144 NITGRLKEALELVDVKTLDHLVVGRDGIVSFAERGWL 180 >UniRef50_A6SWN0 DNA repair protein RadC n=14 Tax=Proteobacteria RepID=A6SWN0_JANMA Length = 190 Score = 156 bits (396), Expect = 4e-37, Method: Composition-based stats. Identities = 57/140 (40%), Positives = 90/140 (64%) Query: 83 IAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFS 142 + ++ L SP+ +++L+ QL E+RE+F V+F+D+QHRV+ + LF Sbjct: 50 VHRAIEILDEHVIKHGPKLTSPKDVKDYLRLQLLNEKREVFAVVFMDTQHRVLAYEPLFF 109 Query: 143 GTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRV 202 GT++ V+PR I++ A+ +NA+++ILAHNHPSG PS+ADK +T R+ + +D+RV Sbjct: 110 GTIHQTSVYPRAIVQRAMSLNAASMILAHNHPSGSTHPSEADKQLTNRLKSLLESIDVRV 169 Query: 203 LDHIVIGRGEYVSFAERGWI 222 LDH +IG SFAE G + Sbjct: 170 LDHFIIGEEGTFSFAEHGLL 189 >UniRef50_Q04U23 DNA repair protein n=4 Tax=Leptospira RepID=Q04U23_LEPBJ Length = 232 Score = 156 bits (396), Expect = 4e-37, Method: Composition-based stats. Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 3/206 (1%) Query: 10 PREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGV 69 PR + + + +L D ELLA+ L G R + + L++E+L GLL + + Sbjct: 17 PRTR-IAYEAESLEDWELLAVLLGRGNRAQPIEELSREILHQSKGFGGLLQKQVSDLRKI 75 Query: 70 HGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLD 129 G+G+AK L E ARR ++ S E FL + L + RE F++I L Sbjct: 76 PGVGIAKATTLLAAVEFARRLKWEALKGRR--YSSEQLLNFLATSLIPKNRECFVLITLS 133 Query: 130 SQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITE 189 + V+ + G+L V V R++++ + AS++I+AHNHP ++PSK D I E Sbjct: 134 PEGAVLRAEIVAVGSLEEVGVQTRDLLKIILNDAASSVIIAHNHPESSSKPSKEDLWIFE 193 Query: 190 RIIKSCQFMDLRVLDHIVIGRGEYVS 215 + + L +LD + G S Sbjct: 194 NFGRLLDMIGLELLDQWIFGIDGIYS 219 >UniRef50_Q9KR57 UPF0758 protein VC_1786 n=59 Tax=Proteobacteria RepID=Y1786_VIBCH Length = 158 Score = 156 bits (395), Expect = 5e-37, Method: Composition-based stats. Identities = 67/148 (45%), Positives = 98/148 (66%), Gaps = 1/148 (0%) Query: 75 AKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRV 134 ++ A + E A R E T E+L+ +L G E EIF V+FLD+QHR+ Sbjct: 12 SQRAYEHRVLEEAAEILEQRYVRGETFARTENTTEYLRCKLAGYEHEIFAVLFLDNQHRL 71 Query: 135 ITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKS 194 I + LF GT++ V+PRE+++EA+ +NA+A+I AHNHPSG EPS+AD+ IT+R+ + Sbjct: 72 IEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADRRITQRLKDA 131 Query: 195 CQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +D+RVLDH+V+G+ VSFAERGW+ Sbjct: 132 LSLVDIRVLDHVVVGKSS-VSFAERGWL 158 >UniRef50_A4SUN7 DNA repair protein n=2 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SUN7_AERS4 Length = 296 Score = 156 bits (395), Expect = 5e-37, Method: Composition-based stats. Identities = 66/139 (47%), Positives = 90/139 (64%) Query: 83 IAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFS 142 I LA R L SPEM E+L+++ E E F +I LD+QHRVI L Sbjct: 24 IIALAHSIIARRFTRLDSLNSPEMVVEYLKTRFATLEHETFAMILLDNQHRVINAVDLSH 83 Query: 143 GTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRV 202 GT++ V+PRE+++ A+K NA+A+ILAHNHPSG AEPS+AD+ ITER+ + +D+RV Sbjct: 84 GTIDSAAVYPREVVKTALKHNAAAVILAHNHPSGVAEPSRADRQITERLQAALDLVDIRV 143 Query: 203 LDHIVIGRGEYVSFAERGW 221 LDHIV+ +SFA RG+ Sbjct: 144 LDHIVVAGENSMSFAVRGF 162 >UniRef50_Q0ACW7 DNA repair protein RadC n=2 Tax=Proteobacteria RepID=Q0ACW7_NITEC Length = 173 Score = 156 bits (394), Expect = 7e-37, Method: Composition-based stats. Identities = 59/150 (39%), Positives = 92/150 (61%) Query: 73 GVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQH 132 G A + I R + + + PE+ ++ +++L G E E+F +IFL+SQ+ Sbjct: 24 GRYTVASDEMIFTATRAAIERKYPANTAMTKPEIAADYFKNKLNGFEHEVFSIIFLNSQY 83 Query: 133 RVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERII 192 R+I +R +F GTL V+PRE+++ AI NA+A+ILAH HPS EPS+ADK IT+R+ Sbjct: 84 RLIAYREMFQGTLTCASVYPREVVKAAISYNAAAVILAHCHPSKETEPSQADKAITKRLK 143 Query: 193 KSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++ +D+ VLDHI++G S AE G + Sbjct: 144 EALDLIDVCVLDHIIVGGNTTKSMAEMGLV 173 >UniRef50_A7FEQ9 DNA repair protein, RadC family n=4 Tax=Yersinia RepID=A7FEQ9_YERP3 Length = 162 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 56/146 (38%), Positives = 89/146 (60%) Query: 77 FAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVIT 136 FAQ + I++ L SPE + +LQ L + RE FMV+FLD++HR++ Sbjct: 15 FAQQQIISQALAILEIQLRHRPYTLTSPEAVKAWLQLHLRPQGRECFMVLFLDNRHRLMA 74 Query: 137 HRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQ 196 + GT N V+PRE++ A+ +A+++AHNHP+G PS+AD+ +T +++ + Sbjct: 75 SETVSVGTFNATTVYPREVVIRALHHRCAAVVIAHNHPAGDPTPSQADRTLTAQLVNALN 134 Query: 197 FMDLRVLDHIVIGRGEYVSFAERGWI 222 +D+RVLDH++IG E VS AE GW+ Sbjct: 135 MVDIRVLDHLIIGESEPVSLAELGWL 160 >UniRef50_Q04B84 DNA repair protein n=2 Tax=Lactobacillus delbrueckii subsp. bulgaricus RepID=Q04B84_LACDB Length = 204 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 10/200 (5%) Query: 23 TDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKG 82 +D +LL L L ++ S +L + G L Sbjct: 13 SDRDLLKLLFDQLPCQSLEDLLQLLDQKHIASFKDILD---------YASGPDCPNDLSL 63 Query: 83 IAELAR-RYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLF 141 E+A R MR S +L ++L G+++E F V++ D Q ++ + LF Sbjct: 64 TIEVAMDRLRRTDMRRSSDWAGSSKIGNYLANKLLGQKQEQFWVLYFDQQQNLLGEKMLF 123 Query: 142 SGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLR 201 GTL+ VHPREI R A+ +++I+AHNHPSG PS D +T+ + K+ + M + Sbjct: 124 QGTLDRSWVHPREIFRWAVVYGCASIIVAHNHPSGALTPSDNDLELTKGLKKASKIMKIT 183 Query: 202 VLDHIVIGRGEYVSFAERGW 221 LDH +IG GEY+S ER Sbjct: 184 FLDHFIIGGGEYLSLREREL 203 >UniRef50_B4X5D3 DNA repair protein RadC n=4 Tax=Alcanivorax sp. DG881 RepID=B4X5D3_9GAMM Length = 164 Score = 155 bits (391), Expect = 1e-36, Method: Composition-based stats. Identities = 59/130 (45%), Positives = 89/130 (68%) Query: 93 VRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHP 152 + L +P +FLQ L E+ E+F IFL+++H+V++ LFSGT++ V+P Sbjct: 35 NELTGREALTAPTDVAQFLQMALAQEKNEVFAAIFLNNKHKVLSFEPLFSGTIDGAAVYP 94 Query: 153 REIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGE 212 R ++++A+ NA+A+I AHNHPSGC EPS+AD+ IT R+ + +D+RVLDH V+ R E Sbjct: 95 RVVVQQALACNAAAVIFAHNHPSGCCEPSQADRTITTRLKDALALIDVRVLDHFVVSRSE 154 Query: 213 YVSFAERGWI 222 +VS AERGW+ Sbjct: 155 WVSLAERGWL 164 >UniRef50_Q7VMM9 Conserved possible DNA repair protein n=1 Tax=Haemophilus ducreyi RepID=Q7VMM9_HAEDU Length = 157 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 58/151 (38%), Positives = 89/151 (58%), Gaps = 4/151 (2%) Query: 72 IGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQ 131 + AK + E R Y + E+ Q QL EERE+F V+F D+Q Sbjct: 11 LNQAKALYENVLRETGIRSYASNPS----FGDEKEASEYCQMQLGFEEREVFGVLFWDTQ 66 Query: 132 HRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERI 191 +R+I +LF GT+N +HPREI+++A+++N+SA+IL HNHPSG PS++DK T +I Sbjct: 67 NRLIRFEKLFFGTINQASIHPREIVKKALELNSSAVILTHNHPSGQVTPSQSDKQTTAKI 126 Query: 192 IKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++CQ +D+ VLDHI++ + SF + Sbjct: 127 KQACQLIDVNVLDHIIVSATDTYSFCMHQLM 157 >UniRef50_Q9KUK8 UPF0758 protein VC_0510 n=11 Tax=Gammaproteobacteria RepID=Y510_VIBCH Length = 157 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 59/144 (40%), Positives = 94/144 (65%), Gaps = 1/144 (0%) Query: 79 QLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHR 138 Q I E A R L +P+ T+E+++ +L ERE+F ++ LD+Q+R+I + Sbjct: 15 QENEILEHAAEILANRYVRGDALTNPDATKEYVRCKLGSYEREVFALLLLDNQNRLIEFK 74 Query: 139 RLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFM 198 LF GT++ V+PRE+++ +++NA+A+I AHNHPSG + PS+AD+ ITER+ + + Sbjct: 75 ELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADRRITERLKDTLALV 134 Query: 199 DLRVLDHIVIGRGEYVSFAERGWI 222 D+RVLDH ++ SFAERGW+ Sbjct: 135 DVRVLDH-IVTGDTCTSFAERGWL 157 >UniRef50_B4S9N8 DNA repair protein RadC n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S9N8_PROA2 Length = 165 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 51/126 (40%), Positives = 80/126 (63%), Gaps = 1/126 (0%) Query: 98 ESPLLSPEMTREF-LQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREII 156 + ++ +F + L + E F ++LD+++++I + GTLN VHPRE+ Sbjct: 40 HPAITRCDIAYDFFCKIGLQDKASEEFYALYLDTKNKIIGLEMISRGTLNASLVHPREVF 99 Query: 157 REAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSF 216 + A NA++++LAHNHPSG EPS ADKL+T R++K+ + +DL+VLDHI++G Y SF Sbjct: 100 KGAFLANANSIMLAHNHPSGNTEPSSADKLVTSRLVKAGKLLDLQVLDHIIVGDKGYYSF 159 Query: 217 AERGWI 222 E G I Sbjct: 160 RESGLI 165 >UniRef50_A8YUM9 DNA repair protein RadC n=9 Tax=Lactobacillus RepID=A8YUM9_LACH4 Length = 207 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 11/202 (5%) Query: 23 TDVELLALFLRTGT-RGKDVLTLAKEML--ENFGSLYGLLTSEYEQFSGVHGIGVAKFAQ 79 TD+ELLA +G + + L NF S + QF + Sbjct: 13 TDLELLAKLFEQFKDKGIETFEEMESFLGKRNFNSFD-----DIVQFITGPNCSSSLAIT 67 Query: 80 LKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRR 139 E+ R + + L S +L +L G ++E +++D+ +R++ ++ Sbjct: 68 ---AEEVMDRLRMASSKRKPVLASSVEVGTYLADKLVGHKQEELWALYVDNGNRIVAEKK 124 Query: 140 LFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMD 199 +F GTLN HPREI R A+ + S + +AHNHPSG PS D +T+ + ++ + M Sbjct: 125 IFQGTLNKSVAHPREIFRWAVIYDCSGIFIAHNHPSGKLIPSSNDFELTKDLYRAAKMMK 184 Query: 200 LRVLDHIVIGRGEYVSFAERGW 221 + +LDH ++G+G+Y+S E+ Sbjct: 185 IDLLDHFIVGQGQYLSMREKEL 206 >UniRef50_Q7UT53 RadC n=1 Tax=Rhodopirellula baltica RepID=Q7UT53_RHOBA Length = 208 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 25/221 (11%) Query: 9 MPREKMLKFG------ISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSE 62 MP+ K G + +D ELLAL LR+ +A + + + Sbjct: 1 MPKAKPTYVGKLVSPRVKEKSDKELLALVLRSQFER-----VANR------KVREIAQAS 49 Query: 63 YEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEE--- 119 + G+ + +L EL +R + L S F +S + Sbjct: 50 KAEL----GLTDIAYERLMAGIELGKRVGEAKTNFNERLTSTHKAVAFCRSHFSRLIAEG 105 Query: 120 -REIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCA 178 +E F ++ LD++HR+I R+ GTL+ VHPRE+ R AI+ S ++LAHNHPSG Sbjct: 106 LQEEFHIVTLDTKHRMIDSHRITVGTLDASLVHPREVFRPAIRDACSCVLLAHNHPSGDP 165 Query: 179 EPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAER 219 PS+ D +T+++ + + + + LDHIV+ R +S E+ Sbjct: 166 TPSREDFKVTQQLTEVGKVIGITALDHIVLARENCLSLREQ 206 >UniRef50_B1IPT7 DNA repair protein RadC n=3 Tax=Enterobacteriaceae RepID=B1IPT7_ECOLC Length = 159 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 90/122 (73%) Query: 101 LLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAI 160 S R++L+ QL ERE F +FLD+QHR+I H LF+GT+NH +VHPRE+++ + Sbjct: 38 FTSSHAVRDWLRLQLASLEREEFTALFLDNQHRLIAHETLFTGTINHTQVHPREVVKAGL 97 Query: 161 KINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERG 220 K N +A+I+AH+HPSG AEPSKAD+ +T RI ++ +D+R+LDH+V+G E SFA+RG Sbjct: 98 KHNCAAVIVAHSHPSGEAEPSKADRQVTTRIQQALDLVDIRLLDHLVVGGMEITSFADRG 157 Query: 221 WI 222 W+ Sbjct: 158 WL 159 >UniRef50_Q47ZW8 DNA repair protein, RadC family protein n=20 Tax=Gammaproteobacteria RepID=Q47ZW8_COLP3 Length = 158 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 61/147 (41%), Positives = 91/147 (61%), Gaps = 1/147 (0%) Query: 76 KFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVI 135 K I + A + + S + T++FL+ +L +E EIF V+ LD+QH++I Sbjct: 13 KPMTENQILDAAAEILACKYVRKDAFTSSQATKDFLRFKLANKEHEIFAVMLLDNQHQMI 72 Query: 136 THRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSC 195 LF GT++ V+PRE+++ + NA+A+IL HNHPSG PS ADK IT+R+ ++ Sbjct: 73 DFVELFRGTIDASAVYPREVVKTVLLENAAAVILTHNHPSGLNSPSIADKDITKRLQEAL 132 Query: 196 QFMDLRVLDHIVIGRGEYVSFAERGWI 222 +D+RVLDHI+IG G Y SFAE G + Sbjct: 133 ALIDVRVLDHIIIGEGTY-SFAENGLL 158 >UniRef50_C6J5M2 DNA repair protein RadC n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J5M2_9BACL Length = 162 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 52/155 (33%), Positives = 92/155 (59%), Gaps = 2/155 (1%) Query: 68 GVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIF 127 ++ + + Q + + EL R+ ++ + +P + + + L G ++E FM++ Sbjct: 10 QLNALPPRRRKQAEKLLELIRKVMEGE--KDHYIHTPADVFQAVATDLVGLDKEHFMILI 67 Query: 128 LDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLI 187 L++++R+++ + GTLN VHPRE+ + AI A+++I HNHPSG PS DK + Sbjct: 68 LNTKNRILSKEVISIGTLNSAIVHPREVFKPAIIKGAASIICVHNHPSGDPAPSSEDKKL 127 Query: 188 TERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 TER+I++ + + + VLDH+VIG YVS E+G I Sbjct: 128 TERLIQAGEIIGIDVLDHVVIGTEGYVSLKEQGMI 162 >UniRef50_A8L178 DNA repair protein RadC n=3 Tax=Actinomycetales RepID=A8L178_FRASN Length = 220 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 67/213 (31%), Positives = 101/213 (47%), Gaps = 1/213 (0%) Query: 1 MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT 60 +K+ PRE+ L G AL D ELLAL L +G+ G D + LA ++ G LY L Sbjct: 3 VKDLPIRERPRERALAAGAEALADRELLALLLGSGSPGCDAVDLAGRLIARHGGLYELSR 62 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 ++ ++ G+G AK A++ L RR + L S E L G Sbjct: 63 ADPQELIAQPGVGPAKAARVCAAFHLGRR-ARPPAAGATGLTSTAALAEAAAPLLRGLRG 121 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E +V+ D ++ R L G H + R+++ ++ SA +AHNHP G EP Sbjct: 122 ERVVVVVCDGNAGILRARLLTQGASGHSPLSMRDLLGYVLRCGGSAFGVAHNHPDGNPEP 181 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEY 213 S D+ +T R+ +S + LR LDH+VI + Sbjct: 182 SADDRRVTTRLRESAALLGLRFLDHVVITDETW 214 >UniRef50_C5D8D2 DNA repair protein RadC n=4 Tax=Firmicutes RepID=C5D8D2_GEOSW Length = 169 Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats. Identities = 43/128 (33%), Positives = 80/128 (62%) Query: 95 MREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPRE 154 + E + SPE + L+ L +RE F+V+ LD++++ G+LN VHPRE Sbjct: 42 LYRERQIKSPEDAYKLLKPFLVEADREKFVVVCLDTKNQPTAINICHIGSLNSSIVHPRE 101 Query: 155 IIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYV 214 + + AI N++++I+AHNHPS PS+ D +T+R++++ + + + +LDH+++ ++V Sbjct: 102 VFKSAILSNSASIIVAHNHPSSDPTPSREDIEVTKRLVEAGRIVGIELLDHLIVCEEKFV 161 Query: 215 SFAERGWI 222 S E+G+I Sbjct: 162 SLKEKGYI 169 >UniRef50_B4Y2Y7 RadC n=1 Tax=Aquabacterium sp. PL1F5 RepID=B4Y2Y7_9BURK Length = 198 Score = 153 bits (388), Expect = 3e-36, Method: Composition-based stats. Identities = 66/202 (32%), Positives = 106/202 (52%), Gaps = 13/202 (6%) Query: 21 ALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQL 80 L+ EL++ L R + L + S + +E +L Sbjct: 10 HLSSAELVSELLAAPVRQAPLPLLCA--CDAAASYQAFDHAPHE-----------LAHKL 56 Query: 81 KGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRL 140 EL R +M E + SP++ +++L G E E+F+V++LD+Q +I L Sbjct: 57 SIARELLLRNMRSKMLEGPVMASPKVVKDWLSMYCAGLEHEVFLVLYLDAQQVLIEAEEL 116 Query: 141 FSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDL 200 F GTL V+PRE+++ A+ NA+A++LAHNHPSG PS AD+L+T+ + S +D+ Sbjct: 117 FRGTLTQTSVYPREVVKNALAHNAAAVLLAHNHPSGQLSPSGADELLTQTLKSSLMMVDV 176 Query: 201 RVLDHIVIGRGEYVSFAERGWI 222 RVLDH ++G +SFAE+G + Sbjct: 177 RVLDHFIVGGDRVLSFAEQGLL 198 >UniRef50_B9ECC3 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9ECC3_MACCJ Length = 150 Score = 153 bits (387), Expect = 4e-36, Method: Composition-based stats. Identities = 41/134 (30%), Positives = 73/134 (54%) Query: 88 RRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNH 147 ++YY E + SP+ +F + + RE F+++ L++++ + +F GT+N Sbjct: 16 KQYYRKTRDERIKVKSPDNVADFCKKLIGNSVREKFLLVGLNTKNEITFVYTVFIGTINM 75 Query: 148 VEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIV 207 +HPRE+ + AI + +++ILAH HPS PS D+ T+R + + + + VLDHI+ Sbjct: 76 SPIHPREVFQVAILNSCASIILAHCHPSDDPTPSSEDREATKRFEECGELLGIPVLDHII 135 Query: 208 IGRGEYVSFAERGW 221 + Y SF E Sbjct: 136 VTESSYFSFRENNL 149 >UniRef50_A0R7V6 DNA repair protein RadC n=5 Tax=Desulfuromonadales RepID=A0R7V6_PELPD Length = 168 Score = 153 bits (387), Expect = 4e-36, Method: Composition-based stats. Identities = 55/150 (36%), Positives = 83/150 (55%), Gaps = 4/150 (2%) Query: 76 KFAQLKGIAELARRYYNVRMREESP---LLSPEMTREFLQSQLTGEEREIFMVIFLDSQH 132 K LK I R+ E SP+ E + L E +E F+ + LD ++ Sbjct: 20 KRIVLKSIEARYRKEAVREDAPEWVTTRFTSPKQVFELFK-DLIYETKEHFITLHLDGKN 78 Query: 133 RVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERII 192 R++ R+ G+LN VHPRE+ + A+ NA+A+I H HPSG PS D IT+R+ Sbjct: 79 RIMCMDRVSIGSLNQSIVHPREVFKTALLSNAAAIICVHQHPSGDPNPSSEDLSITKRLK 138 Query: 193 KSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 ++ + M +RVLDHIV+G +Y+SF E+G + Sbjct: 139 EAGEIMGIRVLDHIVVGHEDYISFVEKGLM 168 >UniRef50_B8KU95 DNA repair protein RadC n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KU95_9GAMM Length = 223 Score = 152 bits (385), Expect = 7e-36, Method: Composition-based stats. Identities = 66/194 (34%), Positives = 107/194 (55%), Gaps = 1/194 (0%) Query: 27 LLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAEL 86 LLA + + ++LA + EN L L+ S + GI A A+L EL Sbjct: 29 LLARAMGL-DPWEAGVSLANALRENNDCLRSLMRRIIGGPSAIGGIDDAARARLIAALEL 87 Query: 87 ARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLN 146 + + + S R FLQ +L + RE+F ++LDS++R+I LF+GT++ Sbjct: 88 GDLLAEAGLYQRDLIASAVECRRFLQRRLGKQRREVFSALYLDSRNRLIVAEDLFAGTID 147 Query: 147 HVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHI 206 V PRE++R A+ +A+++I+AHNHPSG PS+ D+ +T R+ + +D+R+LDH Sbjct: 148 GAAVFPREVVRGALLHDAASVIVAHNHPSGALAPSEQDRQLTRRLSSALSLVDIRLLDHF 207 Query: 207 VIGRGEYVSFAERG 220 ++G G+ VS A G Sbjct: 208 IVGFGDSVSLASLG 221 >UniRef50_B3HA66 DNA repair protein RadC n=3 Tax=Enterobacteriaceae RepID=B3HA66_ECOLX Length = 157 Score = 152 bits (385), Expect = 7e-36, Method: Composition-based stats. Identities = 69/144 (47%), Positives = 102/144 (70%) Query: 79 QLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHR 138 + + I R + LS + T+ +LQ L +ERE+F+V++LD+Q+R++ H Sbjct: 14 EQRVIRRAMRLLEKYQRNPGESFLSSDATKTWLQLHLARQEREMFVVLYLDNQNRLLEHE 73 Query: 139 RLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFM 198 LF GT+N EVHPREI++ A++ NA+A+ILAHNHPSG AEPS+AD+LIT I+K+ + Sbjct: 74 TLFLGTINSTEVHPREIVKSALRHNAAAVILAHNHPSGVAEPSRADRLITTNIVKTLDLV 133 Query: 199 DLRVLDHIVIGRGEYVSFAERGWI 222 ++RVLDH +IG G+ +SFAERGW+ Sbjct: 134 NVRVLDHFIIGAGDVLSFAERGWL 157 >UniRef50_Q3BQ28 RadC family DNA repair protein n=5 Tax=Xanthomonas RepID=Q3BQ28_XANC5 Length = 187 Score = 152 bits (385), Expect = 8e-36, Method: Composition-based stats. Identities = 56/131 (42%), Positives = 89/131 (67%) Query: 91 YNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEV 150 R++ + + SP+ ++L S+ E+F V+FLD +H+++ LF GT++ EV Sbjct: 56 LEQRLQRQGKIHSPDQAGDYLISRCAHLPHEVFGVVFLDIKHQILATEHLFFGTIDGCEV 115 Query: 151 HPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGR 210 HPR + + A+ +NA+A+IL HNHPSG EPS+AD+ +TER+ K+ +D+RVLDH+VIG Sbjct: 116 HPRVVAKRALDLNAAAVILFHNHPSGNPEPSEADRKVTERLQKALSLLDIRVLDHLVIGG 175 Query: 211 GEYVSFAERGW 221 +++S A RGW Sbjct: 176 RQHISLAARGW 186 >UniRef50_C4LDH2 DNA repair protein RadC n=2 Tax=Aeromonadaceae RepID=C4LDH2_TOLAT Length = 165 Score = 152 bits (384), Expect = 8e-36, Method: Composition-based stats. Identities = 63/148 (42%), Positives = 92/148 (62%) Query: 75 AKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRV 134 A K I +ARR R+ + + P +LQ+ + E E+F +FLD+QHR+ Sbjct: 18 ASPVTEKDILIMARRLAKNRLAKGCSIERPSSAFIYLQALMGNYENEVFGSLFLDNQHRI 77 Query: 135 ITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKS 194 I LF GTLN +HPRE+++ A+ +NA+A+I HNHPSG EPS+ADK IT ++ ++ Sbjct: 78 ICFEELFRGTLNVTNIHPREVVKRALAVNAAAVIFVHNHPSGEPEPSEADKKITVQLRET 137 Query: 195 CQFMDLRVLDHIVIGRGEYVSFAERGWI 222 +D+RVLDHIV+G +S AERG + Sbjct: 138 LNLIDVRVLDHIVVGAKACISMAERGLV 165 >UniRef50_Q5E054 DNA repair protein RadC n=3 Tax=Gammaproteobacteria RepID=Q5E054_VIBF1 Length = 157 Score = 151 bits (382), Expect = 1e-35, Method: Composition-based stats. Identities = 63/144 (43%), Positives = 93/144 (64%), Gaps = 1/144 (0%) Query: 79 QLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHR 138 Q I E A R +P T+ +L+ +L ERE+F V+ LD+QHR+I + Sbjct: 15 QENEILEHAAEILANRYVRGDAFSNPTATQNYLRYKLGHYEREVFAVLLLDNQHRLIEFK 74 Query: 139 RLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFM 198 LF GT++ V+PRE+++ +++NA+A+I AHNHPSG + PS+ADK IT R+ ++ + Sbjct: 75 ELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGESTPSQADKRITTRLKEALALI 134 Query: 199 DLRVLDHIVIGRGEYVSFAERGWI 222 D++VLDHIV+G VSFAERG I Sbjct: 135 DVQVLDHIVVGE-TCVSFAERGLI 157 >UniRef50_A1TJG0 DNA repair protein RadC n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TJG0_ACIAC Length = 167 Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 61/150 (40%), Positives = 91/150 (60%), Gaps = 1/150 (0%) Query: 74 VAKFAQLKGIAELARRYYNVRM-REESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQH 132 A Q + A RM E+ + +P ++L+ +L GE E+F V+FLD Q+ Sbjct: 18 PALTVQESRLVHRALHVLEQRMFHREAAISTPRELYDYLRLKLAGELHEVFGVVFLDCQN 77 Query: 133 RVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERII 192 R I LF GT+N V+PR I++ A+ +NAS++IL HNHPSG ++ S AD+ +TERI Sbjct: 78 RAIAFEALFRGTINQAVVYPRVIVKRAMDLNASSVILVHNHPSGTSQCSDADRGLTERIC 137 Query: 193 KSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S +D+RV+DH+++G G SFAE G + Sbjct: 138 ASLGLIDVRVVDHVIVGSGTPYSFAEAGLL 167 >UniRef50_C6E4Z0 DNA repair protein RadC n=3 Tax=Geobacter RepID=C6E4Z0_GEOSM Length = 167 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 47/128 (36%), Positives = 76/128 (59%), Gaps = 2/128 (1%) Query: 95 MREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPRE 154 ++ + S + + L E +E F+ + LD ++R++ + +G+LN VHPRE Sbjct: 42 LKPNTRYTSASQVFDTF-TFLRHETKEHFIALHLDGKNRIVCIDMVSTGSLNQSIVHPRE 100 Query: 155 IIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYV 214 + + A+ +A+A+IL HNHP+G PS D IT R+ ++ + + +RVLDHI+IG Y Sbjct: 101 LFKTALLSSAAAVILLHNHPTGDPTPSTEDLTITRRLQEAGELIGIRVLDHIIIGDN-YY 159 Query: 215 SFAERGWI 222 SF ERG I Sbjct: 160 SFTERGNI 167 >UniRef50_C6DAT0 DNA repair protein RadC n=5 Tax=Enterobacteriaceae RepID=C6DAT0_PECCP Length = 157 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 67/157 (42%), Positives = 105/157 (66%), Gaps = 1/157 (0%) Query: 67 SGVHGIGVAKFAQLKGIAELARRYYNVRMREE-SPLLSPEMTREFLQSQLTGEEREIFMV 125 + + ++ + I ++A R+R+ + E T+ +L +L+ ERE+FMV Sbjct: 1 MSCNSLAGRVASREQRIIQMALCLLEKRVRKNARQFKTSEDTKSWLMLELSNLEREVFMV 60 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 ++LD+QHR+I + G +N EVHPREI++ +++ NA+A+ILAHNHPSG AEPS+AD+ Sbjct: 61 LYLDNQHRLIEKEVIALGGINSTEVHPREILKASLRHNAAAVILAHNHPSGWAEPSQADR 120 Query: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 IT+R+ S +D++VLDH+V+G E VSFAERGW+ Sbjct: 121 NITDRLKDSLSQLDVKVLDHLVVGSTEVVSFAERGWL 157 >UniRef50_Q0AJV4 DNA repair protein RadC n=18 Tax=Proteobacteria RepID=Q0AJV4_NITEC Length = 167 Score = 150 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 57/142 (40%), Positives = 90/142 (63%) Query: 81 KGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRL 140 + I + + + L P+ R++L+ +L E E+F+ +FL+SQH+V+ L Sbjct: 25 RIIQQAIALLEHRVFKAGPTLDGPKAVRDYLRLKLMAEPNEVFVAVFLNSQHQVLACECL 84 Query: 141 FSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDL 200 F GT++ V+PR +++ A+++NASALI +H HPSG AEPS AD+ IT R+ +D+ Sbjct: 85 FKGTVSEASVYPRVVVQRALELNASALIFSHQHPSGVAEPSMADRAITNRLKFILSMIDI 144 Query: 201 RVLDHIVIGRGEYVSFAERGWI 222 RV+DH +IG+GE SFAE G + Sbjct: 145 RVVDHFIIGKGEPYSFAESGLL 166 >UniRef50_C2E2B4 DNA repair protein RadC n=8 Tax=Lactobacillus jensenii RepID=C2E2B4_9LACO Length = 207 Score = 150 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 72/206 (34%), Positives = 105/206 (50%), Gaps = 17/206 (8%) Query: 23 TDVELL-ALFLRTGTRGKDVLT-----LAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAK 76 TD ELL +F+ G L + LENFG +Y LTS I Sbjct: 13 TDQELLNEIFILLEEAGIKSFAELNNVLLNKKLENFGQIYDYLTS--------CQIDDEL 64 Query: 77 FAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVIT 136 L L +R VR R+ +S ++L + G E+E +VI+LD++++V+ Sbjct: 65 ---LSRTITLLKRLKAVRTRKLIQFVSSHEVGKYLIDRFLGVEQEQLVVIYLDNKNKVLG 121 Query: 137 HRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQ 196 R LF GT+N VHPR+I R A+ N+ +++AHNHPSG A PS+ D T++I K+ Sbjct: 122 ERLLFQGTVNRSVVHPRDIFRWAVFYNSVGILIAHNHPSGDANPSQKDIEFTKQINKASD 181 Query: 197 FMDLRVLDHIVIGRGEYVSFAERGWI 222 M + LDHI++ Y+SF E I Sbjct: 182 LMGINFLDHIIVADRSYLSFKEEQLI 207 >UniRef50_Q8VR59 Putative intergenic-region protein n=24 Tax=Escherichia RepID=Q8VR59_ECOLX Length = 260 Score = 150 bits (379), Expect = 3e-35, Method: Composition-based stats. Identities = 51/107 (47%), Positives = 78/107 (72%) Query: 116 TGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPS 175 R F V++L++Q+++I LF+GT+N EVHPRE+I+ A+ NA+A++LAHNHPS Sbjct: 154 AFGVRMEFRVLYLNNQNKLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPS 213 Query: 176 GCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 G PSKAD+LITER++++ +D+RV DH+++G + SFAE G + Sbjct: 214 GEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 260 >UniRef50_C5SDF8 DNA repair protein RadC n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SDF8_CHRVI Length = 167 Score = 150 bits (379), Expect = 3e-35, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 97/147 (65%) Query: 76 KFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVI 135 F + +AE + L SP+ TR++L+ +L G E+F V+ LD++HRV+ Sbjct: 21 SFTERTLVAEAIDCLERHYRVAQEALTSPDATRDYLKLRLYGLTYEVFAVLLLDNRHRVL 80 Query: 136 THRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSC 195 ++ LF GT++ VHPRE++R I+ A+A+I AHNHPSG ++PS+AD+ +T ++ + Sbjct: 81 RYQELFRGTIDTAYVHPREVVRLVIESGAAAVIFAHNHPSGSSDPSQADRTLTRKLQDAL 140 Query: 196 QFMDLRVLDHIVIGRGEYVSFAERGWI 222 +++RVLDHI++G G +SFAE+GW+ Sbjct: 141 ALIEVRVLDHIIVGEGRGMSFAEQGWL 167 >UniRef50_Q2SAN5 DNA repair protein n=2 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SAN5_HAHCH Length = 183 Score = 149 bits (378), Expect = 5e-35, Method: Composition-based stats. Identities = 49/136 (36%), Positives = 86/136 (63%), Gaps = 1/136 (0%) Query: 87 ARRYYNVRMREE-SPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTL 145 A+R R + + P +E+L L E RE F+ +FLD+Q+R+I + LF G + Sbjct: 35 AKRALAQRFKRHSCHMDDPGKVKEYLMMHLAPEPRETFVGLFLDTQNRLIAYEVLFRGAI 94 Query: 146 NHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDH 205 + ++PRE+++ A++ NA+ +I+AHNHPSG +PS D+LIT R++++ +++ ++DH Sbjct: 95 DEAHIYPREVVKAALRHNAAKVIVAHNHPSGDPKPSVNDQLITYRLLQALMLVEIPLIDH 154 Query: 206 IVIGRGEYVSFAERGW 221 V+G + VS A +G Sbjct: 155 FVVGGDQVVSMAAQGI 170 >UniRef50_Q3JDF2 DNA repair protein RadC n=4 Tax=Gammaproteobacteria RepID=Q3JDF2_NITOC Length = 171 Score = 149 bits (377), Expect = 7e-35, Method: Composition-based stats. Identities = 60/142 (42%), Positives = 93/142 (65%) Query: 81 KGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRL 140 + + ELA + + L SP TR+FL+ L + E+F ++LD++HRVI L Sbjct: 30 QSLLELAFAVLHDLHQPGVELPSPNHTRDFLRMLLAERKAEVFGCLYLDNRHRVIETVEL 89 Query: 141 FSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDL 200 F GT++ V+PR ++++A+ +NA+A++ HNHPSG AEPS AD+ IT R+ ++ +D+ Sbjct: 90 FQGTIDGASVYPRVVVQQALSVNAAAVMFFHNHPSGVAEPSNADEAITRRLKEALALVDI 149 Query: 201 RVLDHIVIGRGEYVSFAERGWI 222 RVLDH V+ GE +SFAERG + Sbjct: 150 RVLDHFVVTAGESISFAERGLL 171 >UniRef50_B3TB70 Putative RadC, DNA repair protein n=1 Tax=uncultured marine microorganism HF4000_APKG8L7 RepID=B3TB70_9ZZZZ Length = 195 Score = 149 bits (376), Expect = 7e-35, Method: Composition-based stats. Identities = 45/156 (28%), Positives = 81/156 (51%) Query: 6 QLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQ 65 + R + ++ G AL D ELL L L DV LAK+++E FG G++++ E Sbjct: 16 HRMRLRTRFMEGGEEALADYELLELMLFQANARVDVKPLAKQLIERFGGFTGVVSASPEA 75 Query: 66 FSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMV 125 + G+G A LK + A R E+ + S + + + + + E F+V Sbjct: 76 LREIKGVGDAAIVVLKSVRAAAVRLAREETLEQPVISSWDRRLAYCRVSMAHDRTERFLV 135 Query: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIK 161 +FLD+++++I +GT+NH V+PRE+++ A++ Sbjct: 136 LFLDTKNKIIHDEVQQTGTVNHTPVYPREVVKRALE 171 >UniRef50_B8KQ45 DNA repair protein RadC n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KQ45_9GAMM Length = 177 Score = 148 bits (375), Expect = 9e-35, Method: Composition-based stats. Identities = 55/140 (39%), Positives = 86/140 (61%) Query: 83 IAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFS 142 I E A R+ L SP R++ Q QL E E F +FL +QH I+ F Sbjct: 38 IIEKALALLESRLINSDALTSPVRVRQYCQLQLGHERDEHFACLFLTAQHHAISFEIQFR 97 Query: 143 GTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRV 202 G+++ V+PR I+R +++NA+A+IL HNHPSG +EPS AD+ IT R+ ++ + +D+RV Sbjct: 98 GSIDGAAVYPRVIVRRCLELNAAAVILVHNHPSGVSEPSPADRQITVRLQRALELIDVRV 157 Query: 203 LDHIVIGRGEYVSFAERGWI 222 +DH+++ G+ SFA+ G + Sbjct: 158 VDHLIVSAGDATSFAQAGLL 177 >UniRef50_A9I305 DNA repair protein radC homolog n=3 Tax=Proteobacteria RepID=A9I305_BORPD Length = 177 Score = 148 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 49/148 (33%), Positives = 89/148 (60%) Query: 73 GVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQH 132 G + A + AR + + + + +P + + Q++L+G E+ V++L+SQ Sbjct: 28 GRYQAATDSHVLAAARVAAESLIGDRADMGNPNAVKHYFQAKLSGMGHEVAAVLYLNSQF 87 Query: 133 RVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERII 192 +VI + + GTL V+PREI++ A++++A+A+I++HNHPSG EPS+AD +T + Sbjct: 88 KVIRYMEMSHGTLTQASVYPREIVKTALRLDAAAIIMSHNHPSGIPEPSEADLALTRHLK 147 Query: 193 KSCQFMDLRVLDHIVIGRGEYVSFAERG 220 + +D+R++DHI++ S AERG Sbjct: 148 HALALVDVRLVDHIIVTGQNTTSLAERG 175 >UniRef50_Q042N7 DNA repair protein n=7 Tax=Lactobacillus RepID=Q042N7_LACGA Length = 206 Score = 148 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 62/222 (27%), Positives = 112/222 (50%), Gaps = 25/222 (11%) Query: 8 LMPREKMLKFGISALTDVELLALFLRTGTRGKDVLT---LAKEM----LENFGSLYGLLT 60 M +E++L+ TDV+L+ R+ + KD++T L K++ + +F L+ Sbjct: 3 FMKKEELLQ------TDVDLVKKLARS-LKEKDIITFDSLFKKLEEVGINSFKELWQYAA 55 Query: 61 SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER 120 S + L+ + E R V +E L S ++ +L G + Sbjct: 56 SPKCE--------DEIAVVLQLMLE---RVKGVNNKEIESLYSSSQVGCYIADKLCGRPQ 104 Query: 121 EIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP 180 E I+LDS++++I + +F GT+N HPR+I R A+ N++A +AHNHPSG +P Sbjct: 105 EELYGIYLDSKNKIIAEKLIFQGTVNRAVAHPRDIFRWAVIYNSTAFFVAHNHPSGDEQP 164 Query: 181 SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 S+ D T++++++ + M + LDH ++ Y+SF E + Sbjct: 165 SQHDLRFTKKLVEASKCMGIDFLDHFIVTDNTYLSFREMELL 206 >UniRef50_C4SWK5 DNA repair protein n=1 Tax=Yersinia intermedia ATCC 29909 RepID=C4SWK5_YERIN Length = 152 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 59/145 (40%), Positives = 89/145 (61%) Query: 78 AQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITH 137 I + A+ R + S E RE+L+ +L E E+F V+ LD+QHR++ + Sbjct: 8 CHEDLILQQAQSIIENRYIRGDKMFSTEAVREYLKFKLAPLEHEVFSVLLLDNQHRILAY 67 Query: 138 RRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQF 197 LF GTLN V ++PREI++ +++ NA A+IL HNHPSG EPS ADK IT ++ Sbjct: 68 EELFRGTLNAVSIYPREIVKLSLRYNAGAIILVHNHPSGEPEPSHADKEITNKLKSVLGL 127 Query: 198 MDLRVLDHIVIGRGEYVSFAERGWI 222 +D++VLDH+++ + VS AERG + Sbjct: 128 LDVQVLDHLIVAGTQVVSLAERGLV 152 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.156 0.434 Lambda K H 0.267 0.0478 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,415,020,764 Number of Sequences: 3077464 Number of extensions: 61446336 Number of successful extensions: 175793 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1212 Number of HSP's successfully gapped in prelim test: 48 Number of HSP's that attempted gapping in prelim test: 173978 Number of HSP's gapped (non-prelim): 1287 length of query: 222 length of database: 1,040,396,356 effective HSP length: 124 effective length of query: 98 effective length of database: 658,790,820 effective search space: 64561500360 effective search space used: 64561500360 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 91 (39.4 bits)