Phyre 2 alignment of P0AAG5 with c2w0sB_

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Job Description | P0AAG5
Confidence | 95.49% | Date | Thu Jan 5 11:12:52 GMT 2012
Rank | 186 | Aligned Residues | 30
% Identity | 23% | Template | c2w0sB_
PDB info | PDB header:transferase | Chain: B: PDB Molecule:thymidylate kinase; | PDBTitle: crystal structure of vaccinia virus thymidylate kinase2 bound to brivudin-5'-monophosphate
Resolution | 2.92 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 366 | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | S | R | N | F | V | A | L | V | G | H | T | G | S | G | K | S | T | L | A | S | L | L | M | G | Y | Y | P | L | T | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | G | A | L | I | V | F | E | G | L | D | K | S | G | K | T | T | Q | C | M | N | I | M | E | S | I | P | A | N | T
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  | S | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | S |  | T | T | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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