250 d1sqga2 Probab=96.27   E-value=0.085  Score=30.37  Aligned_columns=112  Identities=23%

Q ss_pred             HHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCHHHCCCCCCCCEEECCCC
Q ss_conf             67888886077789848999748788999999999813899689998189899999997276021012345420104677
Q batch____       162 TQYVYEHRMGVKPGGNIALLACAGPMGIGAIDYAINGGIQPSRVVVVDIDDKRLAQVQKLLPVELAASKGIELVYVNTKG  241 (425)
Q Consensus       162 ~~~~~~~~~~~~~g~~vviigG~G~iGl~aiq~A~~~g~~~~~Vi~~d~~~~rl~~A~~lga~~~~~~~g~~~~~i~~~~  241 (425)
                      +..........++|++|+=++++.  |..+++++...+.  .+|+++|.++.|++.++     +.+...|.....+....
T Consensus        90 ss~~~~~~l~~~~g~~VLD~~ag~--G~~t~~l~~~~~~--~~V~a~D~s~~~l~~a~-----~n~~~~g~~~~~~~~~~  160 (284)
T d1sqga2          90 SAQGCMTWLAPQNGEHILDLCAAP--GGKTTHILEVAPE--AQVVAVDIDEQRLSRVY-----DNLKRLGMKATVKQGDG  160 (284)
T ss_dssp             HHHTHHHHHCCCTTCEEEEESCTT--CHHHHHHHHHCTT--CEEEEEESSTTTHHHHH-----HHHHHTTCCCEEEECCT
T ss_pred             HHHHHHHHHCCCCCCEEEEECCCC--HHHHHHHHHHCCC--CEEEEEECCHHHHHHHH-----HHHHHCCCCEEEEECCC
T ss_conf             888889982888988599808883--3899999960499--78999858989999999-----99997599719997745


Q ss_pred             CCCHHHHHHHHHCCCCEEEEEECCCC----------------------------HHHHHHHHHHHCCCCEEEEE
Q ss_conf             67889999865089970299986898----------------------------89999999971578889999
Q batch____       242 MSDPVQMLRALTGDAGFDDIFVYAAV----------------------------PAVVEMADELLAEDGCLNFF  287 (425)
Q Consensus       242 ~~d~~~~v~~~t~g~g~D~v~d~~g~----------------------------~~~~~~a~~~l~~gG~iv~~  287 (425)
                      .......     ....+|.|+.-.+.                            ...+..+++++++||++++.
T Consensus       161 ~~~~~~~-----~~~~~D~il~d~pcs~~g~~~~~p~~~~~~~~~~~~~l~~~q~~ll~~a~~~lkpgG~lvy~  229 (284)
T d1sqga2         161 RYPSQWC-----GEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYA  229 (284)
T ss_dssp             TCTHHHH-----TTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             CCCCCCC-----CCCCCCCCEECCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             5434335-----34445731114765655520148304314898899989999999999999856888799998