07/01/2012 23:50:17 : INFO  : Run start: Sat Jan  7 23:50:17 GMT 2012
07/01/2012 23:50:19 : INFO  : Initialised job
07/01/2012 23:50:19 : INFO  : Renaming log file 'phyre2_20120107_235017.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/cfa11ccfc7c3a7c0/phyre_20120107_235017.log'
07/01/2012 23:50:20 : INFO  : Initialised job:
Sequence
>batch____
MTKQVKIYHNPRCSKSRETLNLLKENGVEPEVVLYLETPADAATLRDLLKILGMNSAREL
MRQKEDLYKELNLADSSLSEEALIQAMVDNPKLMERPIVVANGKARIGRPPEQVLEIVG

07/01/2012 23:50:20 : INFO  : Checked sequence
07/01/2012 23:50:23 : INFO  : Finding homologues with PSI-BLAST
07/01/2012 23:50:23 : INFO  : PSI-BLAST 3 iterations
07/01/2012 23:51:16 : INFO  : PSI-BLAST 5 iterations
07/01/2012 23:52:13 : INFO  : Finished PSI-BLAST
07/01/2012 23:52:14 : INFO  : Running Buildali to generate a3m file
07/01/2012 23:55:11 : INFO  : Converting to HMM
07/01/2012 23:55:12 : INFO  : Calibrating HMM
07/01/2012 23:55:17 : INFO  : Searching HMM database
07/01/2012 23:58:23 : INFO  : Finished buildali
07/01/2012 23:58:23 : INFO  : Predicting secondary structure
07/01/2012 23:58:26 : INFO  : Predicted secondary structure (PSI-Pred)
07/01/2012 23:58:27 : INFO  : Predicting Disordered regions
07/01/2012 23:58:28 : INFO  : Predicted Disorder (Disopred)
07/01/2012 23:58:28 : INFO  : Running memsat_svm check
07/01/2012 23:59:32 : INFO  : Globular protein
07/01/2012 23:59:32 : INFO  : Predicted Transmembrane (memsat_svm) ID 'cfa11ccfc7c3a7c0'
07/01/2012 23:59:33 : INFO  : Initialising fold library search
07/01/2012 23:59:34 : INFO  : Initialised search input
07/01/2012 23:59:34 : INFO  : Building Ensemble models
07/01/2012 23:59:36 : INFO  : Building hh.c3rdwB_.model.1.pdb
07/01/2012 23:59:41 : INFO  : Building hh.c3f0iA_.model.2.pdb
07/01/2012 23:59:46 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/cfa11ccfc7c3a7c0/hh.c3f0iA_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/cfa11ccfc7c3a7c0/c3f0iA_.1.pdb
07/01/2012 23:59:48 : INFO  : Building c3f0iA_.1.pdb
07/01/2012 23:59:53 : INFO  : Building c3rdwB_.2.pdb
07/01/2012 23:59:57 : INFO  : Building d1j9ba_.3.pdb
08/01/2012 00:00:03 : INFO  : Building d1rw1a_.4.pdb
08/01/2012 00:00:08 : INFO  : Building d1z3ea1.5.pdb
08/01/2012 00:00:13 : INFO  : Building c3l78A_.6.pdb
08/01/2012 00:00:18 : INFO  : Building c2kokA_.7.pdb
08/01/2012 00:00:24 : INFO  : Building c3gkxB_.8.pdb
08/01/2012 00:00:30 : INFO  : Building c3fz4A_.9.pdb
08/01/2012 00:00:35 : INFO  : Building d1h75a_.10.pdb
08/01/2012 00:00:40 : INFO  : Building c3nznA_.11.pdb
08/01/2012 00:00:45 : INFO  : Building d1r7ha_.12.pdb
08/01/2012 00:00:50 : INFO  : Building c3ic4A_.13.pdb
08/01/2012 00:00:57 : INFO  : Building c3lgcA_.14.pdb
08/01/2012 00:01:01 : INFO  : Building d1nm3a1.15.pdb
08/01/2012 00:01:07 : INFO  : Building c1nm3B_.16.pdb
08/01/2012 00:01:12 : INFO  : Building c2khpA_.17.pdb
08/01/2012 00:01:17 : INFO  : Building d1fova_.18.pdb
08/01/2012 00:01:22 : INFO  : Building c2klxA_.19.pdb
08/01/2012 00:01:27 : INFO  : Building d1t1va_.20.pdb
08/01/2012 00:01:45 : INFO  : Finished HH model building
08/01/2012 00:01:45 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
08/01/2012 00:02:21 : INFO  : html domain output complete ID 'cfa11ccfc7c3a7c0'
08/01/2012 00:12:11 : INFO  : Run end  : Sun Jan  8 00:12:11 GMT 2012
