Phyre 2 alignment of P0AFK2 with c3fybA_

Return to main results | Retrieve Phyre Job Id

Job Description | P0AFK2
Confidence | 3.37% | Date | Thu Jan 5 11:26:34 GMT 2012
Rank | 14 | Aligned Residues | 20
% Identity | 20% | Template | c3fybA_
PDB info | PDB header:structural genomics, unknown function | Chain: A: PDB Molecule:protein of unknown function (duf1244); | PDBTitle: crystal structure of a protein of unknown function (duf1244) from2 alcanivorax borkumensis
Resolution | 1.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 218 | . | 220 | . |  |  | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | L | N | G | . | . | S | R | M | W | I | N | S | A | R | E | R | G | S | R | A | L
Query Conservation |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Y | V | Y | G | X | P | F | A | E | W | K | T | L | Y | Q | K | P | A | S | E | A | Q
Template Known Secondary structure |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions