18/01/2012 04:06:33 : INFO  : Run start: Wed Jan 18 04:06:32 GMT 2012
18/01/2012 04:06:36 : INFO  : Initialised job
18/01/2012 04:06:37 : INFO  : Renaming log file 'phyre2_20120118_040632.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/cf8f456eac95938f/phyre_20120118_040632.log'
18/01/2012 04:06:37 : INFO  : Initialised job:
Sequence
>batch____
MDFFSVQNILVHIPIGAGGYDLSWIEAVGTIAGLLCIGLASLEKISNYFFGLINVTLFGI
IFFQIQLYASLLLQVFFFAANIYGWYAWSRQTSQNEAELKIRWLPLPKALSWLAVCVVSI
GLMTVFINPVFAFLTRVAVMIMQALGLQVVMPELQPDAFPFWDSCMMVLSIVAMILMTRK
YVENWLLWVIINVISVVIFALQGVYAMSLEYIILTFIALNGSRMWINSARERGSRALSH

18/01/2012 04:06:38 : INFO  : Checked sequence
18/01/2012 04:06:40 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 04:06:41 : INFO  : PSI-BLAST 3 iterations
18/01/2012 04:08:22 : INFO  : PSI-BLAST 5 iterations
18/01/2012 04:10:18 : INFO  : Finished PSI-BLAST
18/01/2012 04:10:19 : INFO  : Running Buildali to generate a3m file
18/01/2012 04:15:30 : INFO  : Converting to HMM
18/01/2012 04:15:32 : INFO  : Calibrating HMM
18/01/2012 04:15:42 : INFO  : Searching HMM database
18/01/2012 04:21:04 : INFO  : Finished buildali
18/01/2012 04:21:05 : INFO  : Predicting secondary structure
18/01/2012 04:21:11 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 04:21:14 : INFO  : Predicting Disordered regions
18/01/2012 04:21:17 : INFO  : Predicted Disorder (Disopred)
18/01/2012 04:21:18 : INFO  : Running memsat_svm check
18/01/2012 04:23:58 : INFO  : Globular protein
18/01/2012 04:23:59 : INFO  : Predicted Transmembrane (memsat_svm) ID 'cf8f456eac95938f'
18/01/2012 04:23:59 : INFO  : Initialising fold library search
18/01/2012 04:24:01 : INFO  : Initialised search input
18/01/2012 04:24:06 : INFO  : Building Ensemble models
18/01/2012 04:24:09 : INFO  : Building hh.c1xkmD_.model.1.pdb
18/01/2012 04:24:17 : INFO  : Building c1xkmB_.1.pdb
18/01/2012 04:24:26 : INFO  : Building c1xkmD_.2.pdb
18/01/2012 04:24:35 : INFO  : Building c3chxG_.3.pdb
18/01/2012 04:24:44 : INFO  : Building c3crcB_.4.pdb
18/01/2012 04:24:52 : INFO  : Building c2k1kB_.5.pdb
18/01/2012 04:25:01 : INFO  : Building c2k1kA_.6.pdb
18/01/2012 04:25:11 : INFO  : Building c2k1lB_.7.pdb
18/01/2012 04:25:20 : INFO  : Building c2k1lA_.8.pdb
18/01/2012 04:25:30 : INFO  : Building c3on5B_.9.pdb
18/01/2012 04:25:39 : INFO  : Building d1ji6a3.10.pdb
18/01/2012 04:25:48 : INFO  : Building d1h41a2.11.pdb
18/01/2012 04:25:57 : INFO  : Building c3dwwA_.12.pdb
18/01/2012 04:26:05 : INFO  : Building d2euca1.13.pdb
18/01/2012 04:26:13 : INFO  : Building c3fybA_.14.pdb
18/01/2012 04:26:22 : INFO  : Building d2jn6a1.15.pdb
18/01/2012 04:26:30 : INFO  : Building d2vjva1.16.pdb
18/01/2012 04:26:38 : INFO  : Building c2r4gA_.17.pdb
18/01/2012 04:26:47 : INFO  : Building c1ji6A_.18.pdb
18/01/2012 04:26:55 : INFO  : Building d1izma_.19.pdb
18/01/2012 04:27:03 : INFO  : Building c3f4aA_.20.pdb
18/01/2012 04:27:22 : INFO  : Finished HH model building
18/01/2012 04:27:22 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 04:28:53 : INFO  : html domain output complete ID 'cf8f456eac95938f'
18/01/2012 04:31:29 : INFO  : Run end  : Wed Jan 18 04:31:29 GMT 2012
