Phyre 2 alignment of P0AFK2 with d2jn6a1

Return to main results | Retrieve Phyre Job Id

Job Description | P0AFK2
Confidence | 3.26% | Date | Thu Jan 5 11:26:34 GMT 2012
Rank | 15 | Aligned Residues | 17
% Identity | 12% | Template | d2jn6a1
SCOP info | DNA/RNA-binding 3-helical bundle | Homeodomain-like | Cgl2762-like
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 222 | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | S | R | M | W | I | N | S | A | R | E | R | G | S | R | A | L | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | K | N | W | I | I | K | Y | G | S | N | H | N | V | Q | G | T
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |  | S |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions