55 d8ruca1 Probab=97.40   E-value=0.014  Score=37.15  Aligned_columns=229  Identities=11%

Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCHHHH----HHHHHHHHHHCCCCCEEEEECCCCCH
Q ss_conf             12007708987838899999999999779989998672246131799999----99999999970899829996488999
Q batch____         7 VAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEH----ADVVMMTLDLADGRIPVIAGTGANAT   82 (292)
Q Consensus         7 ~a~~TPf~~~g~iD~~~~~~~i~~l~~~Gv~gi~~~GstGE~~~Lt~eEr----~~l~~~~~~~~~~~~~vi~gv~~~s~   82 (292)
                      |-+-|-++++--+..+.+.+.+.-+...|+| +.==-.-........+||    .+.++.+.+.+..++--.+.+++.+.
T Consensus        21 PLi~tiiKP~~Glsp~~~a~~~ye~a~GGvD-~ikDd~L~~~p~~p~e~Rv~a~~eai~ra~~eTG~~~lYa~NiTa~~~   99 (327)
T d8ruca1          21 PLLGCTIKPKLGLSAKNYGRAVYECLRGGLD-FTDDENVNSQPFMRWRDRFLFCAEALYKAQAETGEIKGHYLNATAGTC   99 (327)
T ss_dssp             CEEECCCSSSSCCCHHHHHHHHHHHHHTTCS-BCCCTTCSSBTTBCHHHHHHHHHHHHHHHHHHHSSCCBCCEECCCSSH
T ss_pred             CEEEEECCCCCCCCHHHHHHHHHHHHHCCCC-EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCH
T ss_conf             6787531866679988999999999963985-650322278878988999999999999999972895499996378998


Q ss_pred             HHHHHHHHHHHHCCCCEEEECC--------------------CCCCCCCHHHHHH----------HHHHHHHHCCCCEEE
Q ss_conf             9999999999854998999828--------------------8788999889999----------999999744998999
Q batch____        83 AEAISLTQRFNDSGIVGCLTVT--------------------PYYNRPSQEGLYQ----------HFKAIAEHTDLPQIL  132 (292)
Q Consensus        83 ~~~i~~a~~a~~~Gad~v~i~~--------------------P~~~~~s~~~i~~----------~~~~ia~~~~~piii  132 (292)
                      ++.++.++.++++|+.++|+.+                    |.+.-+.-.+.+.          -+.++..-.+...++
T Consensus       100 ~~m~era~~a~e~Ga~~~min~~~~G~~al~~L~~~~~~~~lpI~aH~a~~ga~~r~~~~Gis~~vl~kl~RLaGaD~i~  179 (327)
T d8ruca1         100 EDMMKRAVFARELGVPIVMHDYLTGGFTANTTLSHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHIH  179 (327)
T ss_dssp             HHHHHHHHHHHHHTCSEEEEEHHHHCHHHHHHHHHHHHHHTCEEEEECTTHHHHHSCSSSSCCHHHHHHHHHHHCCSEEE
T ss_pred             HHHHHHHHHHHHCCCCEEEECHHHCCHHHHHHHHHHCCCCCCCEEECCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEE
T ss_conf             99999999999739989996115306799999986355458707743110234333700383089999999970898997


Q ss_pred             EECCCCCCCCCCHHHHHHHH-----------------------CCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCHH
Q ss_conf             85454335775989999984-----------------------3998899960899989999999862998799958779
Q batch____       133 YNVPSRTGCDLLPETVGRLA-----------------------KVKNIIGIKEATGNLTRVNQIKELVSDDFVLLSGDDA  189 (292)
Q Consensus       133 Yn~P~~tg~~~s~~~l~~L~-----------------------~~p~v~giK~s~~d~~~~~~~~~~~~~~~~v~~G~d~  189 (292)
                      |+.+. .....+.+.+.++.                       .++.+.=+-=+.-...++..+++..++++.+..|..-
T Consensus       180 ~~t~~-Gk~~~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~k~~lPv~sGG~~~g~vp~~~~~~G~Dvil~aGGGi  258 (327)
T d8ruca1         180 SGTVV-GKLEGERDITLGFVDLLRDDYTEKDRSRGIYFTQSWVSTPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGT  258 (327)
T ss_dssp             CCCSS-SSSCCCHHHHHHHHHHHHCSEECCBGGGTBCSCEECTTCCCCEEEEESSCCGGGHHHHHHHHCSSSEEECSHHH
T ss_pred             ECCCC-CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCHHHHHHHCCHH
T ss_conf             16878-87568978999999998631001111134200121133885304116878998889999975634664317054


Q ss_pred             HHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCC-------------HHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             999999848884469899988999999999998899-------------78999999999999999851589
Q batch____       190 SALDFMQLGGHGVISVTANVAARDMAQMCKLAAEGH-------------FAEARVINQRLMPLHNKLFVEPN  248 (292)
Q Consensus       190 ~~~~~l~~G~~G~~~~~~~~~P~~~~~~~~a~~~gd-------------~~~a~~l~~~l~~~~~~~~~~~~  248 (292)
                      +       |=....-+-+    +.+++-|+++.+|.             .+++.+-...+....+.+.+..+
T Consensus       259 ~-------gHPdG~~aGa----~A~RqA~ea~~~g~~~~~~~~~eg~~~l~e~ak~~~eL~~Al~~wg~~~~  319 (327)
T d8ruca1         259 L-------GHPWGNAPGA----VANRVALEACVQARNEGRDLAREGNTIIREATKWSPELAAACEVWKEIKF  319 (327)
T ss_dssp             H-------TSTTCHHHHH----HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTTCHHHHHHHHHHTTCCC
T ss_pred             H-------CCCCCHHHHH----HHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCEEE
T ss_conf             0-------6888325779----99999999997023210122101573079996308878999997273588


