18/01/2012 10:12:12 : INFO  : Run start: Wed Jan 18 10:12:10 GMT 2012
18/01/2012 10:12:22 : INFO  : Initialised job
18/01/2012 10:12:25 : INFO  : Renaming log file 'phyre2_20120118_101209.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/cf85a825e773907e/phyre_20120118_101209.log'
18/01/2012 10:12:27 : INFO  : Initialised job:
Sequence
>batch____
MSSQFTTPVVTEMQVIPVAGHDSMLMNLSGAHAPFFTRNIVIIKDNSGHTGVGEIPGGEK
IRKTLEDAIPLVVGKTLGEYKNVLTLVRNTFADRDAGGRGLQTFDLRTTIHVVTGIEAAM
LDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGNRKATPLPYQSQPDDSCDWYRLRHE
EAMTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAESIVALAQRFPQARITLDPNGAW
SLNEAIKIGKYLKGSLAYAEDPCGAEQGFSGREVMAEFRRATGLPTATNMIATDWRQMGH
TLSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGLTWGSHSNNHFDISLAMFTHVAAAAPG
KITAIDTHWIWQEGNQRLTKEPFEIKGGLVQVPEKPGLGVEIDMDQVMKAHELYQKHGLG
ARDDAMGMQYLIPGWTFDNKRPCMVR

18/01/2012 10:12:30 : INFO  : Checked sequence
18/01/2012 10:12:35 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 10:12:38 : INFO  : PSI-BLAST 3 iterations
18/01/2012 10:15:22 : INFO  : PSI-BLAST 5 iterations
18/01/2012 10:18:10 : INFO  : Finished PSI-BLAST
18/01/2012 10:18:14 : INFO  : Running Buildali to generate a3m file
18/01/2012 10:30:51 : INFO  : Converting to HMM
18/01/2012 10:30:58 : INFO  : Calibrating HMM
18/01/2012 10:31:24 : INFO  : Searching HMM database
18/01/2012 10:40:57 : INFO  : Finished buildali
18/01/2012 10:41:00 : INFO  : Predicting secondary structure
18/01/2012 10:41:17 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 10:41:20 : INFO  : Predicting Disordered regions
18/01/2012 10:41:28 : INFO  : Predicted Disorder (Disopred)
18/01/2012 10:41:31 : INFO  : Running memsat_svm check
18/01/2012 10:44:42 : INFO  : Globular protein
18/01/2012 10:44:44 : INFO  : Predicted Transmembrane (memsat_svm) ID 'cf85a825e773907e'
18/01/2012 10:44:48 : INFO  : Initialising fold library search
18/01/2012 10:44:54 : INFO  : Initialised search input
18/01/2012 10:44:58 : INFO  : Building Ensemble models
18/01/2012 10:45:05 : INFO  : Building hh.c1ec8B_.model.1.pdb
18/01/2012 10:45:34 : INFO  : Building c1ec8B_.1.pdb
18/01/2012 10:46:02 : INFO  : Building c3nxlD_.2.pdb
18/01/2012 10:46:28 : INFO  : Building c3n6jA_.3.pdb
18/01/2012 10:46:55 : INFO  : Building c3mznA_.4.pdb
18/01/2012 10:47:23 : INFO  : Building c2nqlB_.5.pdb
18/01/2012 10:47:50 : INFO  : Building c2pp1C_.6.pdb
18/01/2012 10:48:18 : INFO  : Building c2pgwC_.7.pdb
18/01/2012 10:48:46 : INFO  : Building d1jdfa1.8.pdb
18/01/2012 10:49:16 : INFO  : Building c2oo6A_.9.pdb
18/01/2012 10:49:43 : INFO  : Building c3tjiA_.10.pdb
18/01/2012 10:50:12 : INFO  : Building c2qgyA_.11.pdb
18/01/2012 10:50:41 : INFO  : Building c2hxtA_.12.pdb
18/01/2012 10:51:08 : INFO  : Building c2o56D_.13.pdb
18/01/2012 10:51:36 : INFO  : Building c2chrA_.14.pdb
18/01/2012 10:52:02 : INFO  : Building c2ox4E_.15.pdb
18/01/2012 10:52:31 : INFO  : Building c3t6cB_.16.pdb
18/01/2012 10:52:58 : INFO  : Building c3rcyC_.17.pdb
18/01/2012 10:53:26 : INFO  : Building c2gl5A_.18.pdb
18/01/2012 10:53:54 : INFO  : Building c3rr1B_.19.pdb
18/01/2012 10:54:23 : INFO  : Building c3thuC_.20.pdb
18/01/2012 10:55:20 : INFO  : Finished HH model building
18/01/2012 10:55:23 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 10:56:23 : INFO  : html domain output complete ID 'cf85a825e773907e'
18/01/2012 14:15:45 : INFO  : Run end  : Wed Jan 18 14:15:43 GMT 2012
