342 c1ynpA_ Probab=24.64   E-value=42  Score=13.23  Aligned_columns=162  Identities=10%

Q ss_pred             CCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHC--CC-CCCE
Q ss_conf             79989999999998885499516622677998899999999998659957999468888999999999861--36-8618
Q batch____       182 AMTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAESIVALAQRFPQARITLDPNGAWSLNEAIKIGKYL--KG-SLAY  258 (446)
Q Consensus       182 ~~~~~~~~~~a~~~~~~~Gf~~~KlK~g~~~~~~d~~~v~aire~~pd~~L~vDaN~~w~~~~Ai~~~~~l--e~-~l~w  258 (446)
                      ..+.++..+..+...+. |++.|-.-..=.+-..+...-+++++...++.+.-+.....-....-+-.+.|  ++ ++.+
T Consensus        25 g~~~~~~~~~l~~A~~~-Gin~fDTA~~Yg~g~sE~~lG~~l~~~~~~~~~~~~~~~~~i~~~~e~sl~~L~~d~iDl~~  103 (283)
T c1ynpA_          25 GTDETKARRIMDEVLEL-GINYLDTADLYNQGLNEQFVGKALKGRRQDIILATKVSKAYIKEAVKDSLRRLQTDYIDLYQ  103 (283)
T ss_dssp             CSCHHHHHHHHHHHHHT-TCCEEECSCBTTBCCCHHHHHHHHTTCGGGCEEEEECCHHHHHHHHHHHHHHHTCSCEEEEE
T ss_pred             CCCHHHHHHHHHHHHHC-CCCEEECCCHHCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf             87889999999999986-99889971031898448999999840487699726753799999999999970898432021


Q ss_pred             EECCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEE
Q ss_conf             86678811332307999999986399598188608899999999737997895067702259999999999980993995
Q batch____       259 AEDPCGAEQGFSGREVMAEFRRATGLPTATNMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGLTWGS  338 (446)
Q Consensus       259 iEeP~~~~d~~~~~~~~a~Lr~~~~ipIa~gE~~~~~~~~~~li~~~~~dv~~~d~~~gGi~~~~kia~lA~~~gv~~~~  338 (446)
                      +--|-.........+.+..+++..-+ -..|-+.++..++..++....+|++|...+..--.. .+....|..+|+.+..
T Consensus       104 lh~~~~~~~~~~~~~~l~~l~~~g~i-~~iG~s~~~~~~~~~~~~~~~~~~~q~~~n~~~~~~-~~~l~~~~~~g~~~~~  181 (283)
T c1ynpA_         104 LHGGTIDDPIDETIEAFEELKQEGVI-RYYGISSIRPNVIKEYLKRSNIVSIMMQYSILDRRP-EEWFPLIQEHGVSVVV  181 (283)
T ss_dssp             ECSCCTTSCHHHHHHHHHHHHHHTSE-EEEEEECCCHHHHHHHHHHSCCCEEEEECBTTBCGG-GGGHHHHHHTTCEEEE
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHC-CEECCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCC-HHHHHHHHHCCCEEEE
T ss_conf             00688788968899999999984304-713147788899998313357128887103675674-7889999984982798


Q ss_pred             CCCCCHHH
Q ss_conf             17875268
Q batch____       339 HSNNHFDI  346 (446)
Q Consensus       339 h~~~~~~i  346 (446)
                      .+....+.
T Consensus       182 ~~~l~~g~  189 (283)
T c1ynpA_         182 RGPVARGL  189 (283)
T ss_dssp             ECTTGGGT
T ss_pred             EECCCCCC
T ss_conf             00023531