 |
| Job Description | P0AC65 | | Confidence | 89.16% | Date | Thu Jan 5 11:17:18 GMT 2012 |
| Rank | 334 | Aligned Residues | 77 |
| % Identity | 13% | Template | c3fw2A_ |
| PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:thiol-disulfide oxidoreductase; |
PDBTitle: c-terminal domain of putative thiol-disulfide oxidoreductase from2 bacteroides thetaiotaomicron.
|
| Resolution | 1.74 Å |
|
 |
|   |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 50 |
| Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
| Query Sequence |   |
I | T | I | Y | T | R | N | D | C | V | Q | C | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | A | T | K | R | A | M | E | N | R | G | F | D | F | E | M | I | N | V | D | R | V | P | E | A | A | E | A | L | R | A | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | F | R | Q |
| Query Conservation |   |
|   |
|
|   |   |   |   |
|   |   |
| . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |
|   |   |   |   |
|   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
| Template Conservation |   |
|
|   |
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
| Template Sequence |   |
L | I | N | F | W | A | S | W | N | D | S | I | S | Q | K | Q | S | N | S | E | L | R | E | I | Y | K | K | Y | K | K | N | K | Y | I | G | X | L | G | I | S | L | D | V | D | K | Q | Q | W | K | D | A | I | K | R | D | T | L | D | W | E | Q | V | C | D | F | G | G | L | N | S | E | V | A | K | Q | Y | S | I | Y | K |
| Template Known Secondary structure |   |
 |  |  |  |  |
| T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | S |  |  |  |  |  |  |  |
|
| S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |
|
| S |
| G | G | G |
|  |  |  |  |  | T | T |
|
| S |
| Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
247 | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . |
|   |
|   |   |
51 | . | . | . | . | . | |
|
|
. | . | . | 60 | . | |
. | . | . | . | . | . | . | . | 70 | . | |
. | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|  |  |  |  | . | . | . |
|
|  |  |  | . |  |
|
|
|  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
| . |
. |
. |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | P | V | V | I | A | . |
. |
. |
G | D | L | S | W | . |
S | G | F | R | P | D | M | I | N | R | . |
L | H | P | A | P | H | A | A |
| Query Conservation |   |
|
|   |
|   |
| . | . | . |   |   |   |   |
| . |   |
|
|   |   |
|   |
|   |   | . |
|   |   |
|   |   |   |
|
| Alig confidence |   |
|
|
|
|
|
| . | . | . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |   |   |
|
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|
|
| Template Sequence |   |
I | P | A | N | I | L | L | S | S | D | G | K | I | L | A | K | N | L | R | G | E | E | L | K | K | K | I | E | N | I | V | E | E | A |
| Template Known Secondary structure |   |
S | S |  |  |  |  |  |
| T | T | S | B |  |  |  |  | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
327 | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|