BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (350 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P36547 HTH-type transcriptional regulator eutR n=115 Ta... 732 0.0 UniRef50_A1VQJ8 Transcriptional regulator, AraC family n=4 Tax=B... 228 3e-58 UniRef50_A6VSI6 Helix-turn-helix-domain containing protein AraC ... 203 6e-51 UniRef50_C4KY56 Ethanolamine operon transcriptional activator Eu... 196 1e-48 UniRef50_Q1N3C0 HTH-type transcriptional regulator eutR n=1 Tax=... 181 3e-44 UniRef50_Q5P0V5 Transcriptional regulator, AraC family, n=3 Tax=... 178 2e-43 UniRef50_A0B1I5 Transcriptional regulator, AraC family n=25 Tax=... 174 4e-42 UniRef50_C4I2G6 Transcriptional regulator, AraC family n=26 Tax=... 169 2e-40 UniRef50_Q87WL8 Transcriptional regulator, AraC family n=5 Tax=P... 167 7e-40 UniRef50_A0Y3G2 Transcriptional regulator, AraC family protein n... 164 5e-39 UniRef50_A2SII1 Transcriptional regulator, AraC family n=1 Tax=M... 153 1e-35 UniRef50_A1TWG5 Transcriptional regulator, AraC family n=2 Tax=A... 150 6e-35 UniRef50_B9Z415 Transcriptional regulator, AraC family n=1 Tax=L... 148 3e-34 UniRef50_A6W073 Helix-turn-helix-domain containing protein AraC ... 147 5e-34 UniRef50_Q5P5Q4 Probable regulatory protein n=1 Tax=Aromatoleum ... 145 2e-33 UniRef50_A0B2C1 Transcriptional regulator, AraC family n=17 Tax=... 144 3e-33 UniRef50_A9AKQ9 AraC family transcriptional regulator n=1 Tax=Bu... 143 1e-32 UniRef50_A7JZD1 Ethanolamine operon regulatory protein n=3 Tax=V... 143 1e-32 UniRef50_A5EB19 Transcriptional regulator, AraC family n=2 Tax=B... 140 7e-32 UniRef50_A1SRM6 DNA-binding helix-turn-helix domain-containing t... 140 9e-32 UniRef50_C6QHZ1 Transcriptional regulator, AraC family n=1 Tax=H... 136 1e-30 UniRef50_C4KAZ9 Transcriptional regulator, AraC family n=1 Tax=T... 134 5e-30 UniRef50_B1Z491 Transcriptional regulator, AraC family n=6 Tax=B... 134 6e-30 UniRef50_UPI00016AB122 ethanolamine operon transcriptional activ... 130 7e-29 UniRef50_A4JQI4 Transcriptional regulator, AraC family n=5 Tax=B... 130 8e-29 UniRef50_C6XCD3 Transcriptional regulator, AraC family n=1 Tax=M... 130 1e-28 UniRef50_Q0K462 Transcriptional regulator, AraC-family n=1 Tax=R... 129 1e-28 UniRef50_Q1H3X2 Transcriptional regulator, AraC family n=3 Tax=P... 128 3e-28 UniRef50_A5EM40 Transcriptional regulator, AraC family n=1 Tax=B... 125 3e-27 UniRef50_C3KB89 Putative AraC family regulatory protein n=1 Tax=... 122 1e-26 UniRef50_C6WX32 Transcriptional regulator, AraC family n=2 Tax=P... 121 3e-26 UniRef50_D1T8Q5 AraC family transcriptional regulator n=1 Tax=Bu... 121 5e-26 UniRef50_C3KBA5 AraC family regulatory protein n=2 Tax=Proteobac... 114 6e-24 UniRef50_Q88I52 Transcriptional regulator, AraC family n=8 Tax=P... 109 1e-22 UniRef50_Q46TV6 Transcriptional regulator, AraC family n=1 Tax=R... 109 1e-22 UniRef50_B1YYW7 Transcriptional regulator, AraC family n=5 Tax=B... 109 2e-22 UniRef50_B7KJD4 Transcriptional regulator, AraC family n=1 Tax=C... 108 4e-22 UniRef50_C9PH24 Ethanolamine operon regulatory protein n=1 Tax=V... 107 8e-22 UniRef50_Q488C6 Transcriptional regulator, AraC family n=2 Tax=C... 103 1e-20 UniRef50_A2SJ66 Transcriptional regulator, AraC family n=1 Tax=M... 103 1e-20 UniRef50_D1U469 Transcriptional regulator, AraC family n=1 Tax=D... 99 3e-19 UniRef50_B4AUP2 Transcriptional regulator, AraC family n=1 Tax=C... 91 9e-17 UniRef50_UPI00006A2B14 UPI00006A2B14 related cluster n=1 Tax=Xen... 91 9e-17 UniRef50_A3YU12 Transcriptional regulator, AraC family protein n... 90 1e-16 UniRef50_Q3LUX0 Transcriptional activator (Fragment) n=2 Tax=Pse... 86 2e-15 UniRef50_Q4KIN6 Transcriptional regulator, AraC family n=15 Tax=... 85 5e-15 UniRef50_Q4C4B2 Helix-turn-helix, AraC type n=1 Tax=Crocosphaera... 85 5e-15 UniRef50_A5VD66 Transcriptional regulator, AraC family n=1 Tax=S... 84 1e-14 UniRef50_C7N068 DNA-binding domain-containing protein, AraC-type... 83 1e-14 UniRef50_Q1QJ52 Transcriptional regulator, AraC family n=1 Tax=N... 82 3e-14 UniRef50_B9Z058 Transcriptional regulator, AraC family n=1 Tax=L... 81 5e-14 UniRef50_D1T5H4 AraC family transcriptional regulator n=1 Tax=Bu... 80 8e-14 UniRef50_B3Q2C8 Putative transcriptional regulator protein, AraC... 80 9e-14 UniRef50_B9JL66 Transcriptional regulator protein n=1 Tax=Agroba... 80 1e-13 UniRef50_A9BUW9 Transcriptional regulator, AraC family n=1 Tax=D... 80 2e-13 UniRef50_Q0K9L2 Transcriptional regulator, AraC-family n=2 Tax=C... 79 2e-13 UniRef50_UPI00016A2E59 transcriptional regulator, AraC family pr... 79 2e-13 UniRef50_A3YW71 Transcriptional regulator, AraC family protein n... 79 2e-13 UniRef50_Q6W1W0 Putative AraC family transcriptional regulatory ... 79 2e-13 UniRef50_C5AKE9 Transcriptional regulator, AraC family protein n... 79 3e-13 UniRef50_B5ZVG3 Transcriptional regulator, AraC family n=1 Tax=R... 79 4e-13 UniRef50_B8ESU5 Transcriptional regulator, AraC family n=1 Tax=M... 78 6e-13 UniRef50_C3MI82 Putative AraC family transcriptional regulatory ... 77 9e-13 UniRef50_Q89NR2 Bll3772 protein n=1 Tax=Bradyrhizobium japonicum... 77 9e-13 UniRef50_A1T1B9 Transcriptional regulator, AraC family n=2 Tax=M... 77 1e-12 UniRef50_C6WIT0 Transcriptional regulator, AraC family n=2 Tax=A... 77 1e-12 UniRef50_Q39MU6 Transcriptional regulator, AraC family n=10 Tax=... 77 1e-12 UniRef50_C3KLQ8 Probable transcriptional regulator protein, AraC... 77 1e-12 UniRef50_Q9KW95 Riorf89 protein n=2 Tax=Agrobacterium rhizogenes... 76 2e-12 UniRef50_UPI0001AF5566 helix-turn-helix domain-containing protei... 76 2e-12 UniRef50_C6B4N8 Transcriptional regulator, AraC family n=13 Tax=... 76 2e-12 UniRef50_B2I0G9 AraC-type DNA-binding domain-containing protein ... 75 3e-12 UniRef50_D1SW59 Transcriptional regulator, AraC family n=5 Tax=P... 75 3e-12 UniRef50_A6QA54 Putative uncharacterized protein n=1 Tax=Sulfuro... 75 5e-12 UniRef50_B9JJ58 Transcriptional regulator protein n=1 Tax=Agroba... 75 5e-12 UniRef50_Q987P8 Transcriptional regulator n=1 Tax=Mesorhizobium ... 74 5e-12 UniRef50_C6B5E0 Transcriptional regulator, AraC family n=7 Tax=R... 74 7e-12 UniRef50_D2BF03 AraC family transcriptional regulator n=1 Tax=St... 74 7e-12 UniRef50_B6A526 Transcriptional regulator, AraC family n=4 Tax=R... 74 7e-12 UniRef50_A0QJX7 Transcriptional regulator, AraC family protein n... 74 8e-12 UniRef50_A1K6X6 Putative AraC-family transcriptional regulator n... 74 9e-12 UniRef50_A1WJA6 Transcriptional regulator, AraC family n=1 Tax=V... 74 1e-11 UniRef50_D1BV80 Transcriptional regulator, AraC family n=1 Tax=X... 74 1e-11 UniRef50_B0SX63 Transcriptional regulator, AraC family n=1 Tax=C... 73 1e-11 UniRef50_B3Q2F7 Probable transcriptional regulator protein, AraC... 73 1e-11 UniRef50_Q46VL0 Transcriptional regulator, AraC family n=1 Tax=R... 73 1e-11 UniRef50_B9JJ57 Transcriptional regulator protein n=1 Tax=Agroba... 73 1e-11 UniRef50_A1T7M7 Transcriptional regulator, AraC family n=2 Tax=M... 72 2e-11 UniRef50_B5W7W7 Transcriptional regulator, AraC family n=1 Tax=A... 72 2e-11 UniRef50_D0T367 Transcriptional regulator n=2 Tax=Acinetobacter ... 72 3e-11 UniRef50_Q47GE0 Transcriptional regulator, AraC family n=1 Tax=D... 72 3e-11 UniRef50_A6X646 Helix-turn-helix-domain containing protein AraC ... 72 3e-11 UniRef50_C3KLK8 Probable transcriptional regulator protein, AraC... 72 3e-11 UniRef50_A7ICV7 Helix-turn-helix-domain containing protein AraC ... 72 4e-11 UniRef50_A6VRG8 Helix-turn-helix-domain containing protein AraC ... 71 5e-11 UniRef50_C6B4J9 Transcriptional regulator, AraC family n=8 Tax=R... 71 5e-11 UniRef50_B0JHC6 Transcriptional regulator n=3 Tax=Microcystis ae... 71 5e-11 UniRef50_Q2T8G3 Transcriptional regulator, AraC family n=15 Tax=... 71 6e-11 UniRef50_C4RJP1 AraC family transcriptional regulator n=1 Tax=Mi... 71 6e-11 UniRef50_C5CKJ3 Transcriptional regulator, AraC family n=2 Tax=V... 70 8e-11 UniRef50_UPI0001C38021 transcriptional regulator, AraC family pr... 70 8e-11 UniRef50_B9JM27 Transcriptional regulator protein, AraC family n... 70 9e-11 UniRef50_Q2G526 Transcriptional regulator, AraC family n=1 Tax=N... 70 1e-10 UniRef50_A1K6U8 Putative AraC-family transcriptional regulator n... 70 2e-10 UniRef50_A6Q8V3 Putative uncharacterized protein n=1 Tax=Sulfuro... 69 2e-10 UniRef50_A6EWL3 Helix-turn-helix, AraC type:Arac protein, arabin... 69 2e-10 UniRef50_A1WQJ9 Transcriptional regulator, AraC family n=1 Tax=V... 69 2e-10 UniRef50_B3Q6V1 Transcriptional regulator, AraC family n=2 Tax=R... 69 2e-10 UniRef50_A5CMT0 Putative transcriptional regulator, AraC family ... 69 3e-10 UniRef50_P43462 Probable thc operon regulatory protein n=3 Tax=R... 69 3e-10 UniRef50_Q1LI32 Transcriptional regulator, AraC family n=3 Tax=C... 69 3e-10 UniRef50_Q0SIM0 Transcriptional regulator, AraC family protein n... 69 4e-10 UniRef50_A3PHN4 Helix-turn-helix-domain containing protein, AraC... 68 5e-10 UniRef50_UPI0001B4618F transcriptional regulator, AraC family pr... 68 6e-10 UniRef50_A1R1F9 Transcriptional regulator, AraC family n=1 Tax=A... 68 6e-10 UniRef50_Q0RUS5 Possible transcriptional regulator, AraC family ... 67 7e-10 UniRef50_Q0IDH2 Probable transcriptional regulator, AraC family,... 67 7e-10 UniRef50_C5CKJ0 Transcriptional regulator, AraC family n=1 Tax=V... 67 1e-09 UniRef50_A9EZ15 Transcriptional regulator, AraC family protein n... 67 1e-09 UniRef50_B4SLW6 Transcriptional regulator, AraC family n=3 Tax=S... 67 1e-09 UniRef50_B2T964 Transcriptional regulator, AraC family n=1 Tax=B... 67 1e-09 UniRef50_A1UDL6 Transcriptional regulator, AraC family n=6 Tax=M... 66 2e-09 UniRef50_C4DJB3 DNA-binding domain-containing protein, AraC-type... 66 2e-09 UniRef50_Q3JKS7 AraC-family transcriptional regulator n=43 Tax=B... 66 2e-09 UniRef50_A5V7Y2 Transcriptional regulator, AraC family n=1 Tax=S... 66 2e-09 UniRef50_Q5YXL4 Putative transcriptional regulator n=1 Tax=Nocar... 66 2e-09 UniRef50_Q13EW4 Transcriptional regulator, AraC family n=5 Tax=R... 65 3e-09 UniRef50_A5V7G7 Helix-turn-helix-domain containing protein, AraC... 65 3e-09 UniRef50_A6EXV2 BenABC operon transcriptional activator BenR n=2... 65 3e-09 UniRef50_A4TA18 Helix-turn-helix-domain containing protein, AraC... 65 3e-09 UniRef50_B7RQR5 Transcriptional regulator, AraC family n=1 Tax=R... 65 3e-09 UniRef50_Q05335 XylDLEGF operon transcriptional activator 3 n=35... 65 3e-09 UniRef50_UPI00019090B3 AraC family transcriptional regulator n=1... 65 4e-09 UniRef50_Q07S24 Transcriptional regulator, AraC family n=1 Tax=R... 65 4e-09 UniRef50_Q3JJW1 AndR n=53 Tax=Burkholderia RepID=Q3JJW1_BURP1 65 4e-09 UniRef50_A5V484 Transcriptional regulator, AraC family n=2 Tax=S... 65 5e-09 UniRef50_Q8RL38 Putative uncharacterized protein n=2 Tax=Burkhol... 64 5e-09 UniRef50_B2I0G2 AraC-type DNA-binding domain-containing protein ... 64 6e-09 UniRef50_Q5Z0F0 Putative transcriptional regulator n=1 Tax=Nocar... 64 6e-09 UniRef50_C9N369 Transcriptional regulator, AraC family n=1 Tax=S... 64 6e-09 UniRef50_A1K4I0 Putative AraC-family transcriptional regulator n... 64 6e-09 UniRef50_Q0FPK9 Transcriptional regulator, AraC family protein n... 64 7e-09 UniRef50_A5V4X1 Transcriptional regulator, AraC family n=2 Tax=S... 64 7e-09 UniRef50_UPI0001746906 putative ethanolamine operon transcriptio... 64 7e-09 UniRef50_Q39N46 Transcriptional regulator, AraC family n=2 Tax=B... 64 8e-09 UniRef50_B3QGC9 Transcriptional regulator, AraC family n=5 Tax=R... 64 8e-09 UniRef50_A5V4Y1 Transcriptional regulator, AraC family n=1 Tax=S... 64 9e-09 UniRef50_UPI0001AF7528 hypothetical protein MkanA1_24775 n=1 Tax... 63 1e-08 UniRef50_Q7U5V1 Possible AraC-type regulatory protein n=1 Tax=Sy... 63 1e-08 UniRef50_Q0S6X8 Transcriptional regulator, AraC family protein n... 63 2e-08 UniRef50_C8S415 Transcriptional regulator, AraC family n=1 Tax=R... 63 2e-08 UniRef50_B8Y4V1 EthR n=4 Tax=Corynebacterineae RepID=B8Y4V1_9NOCA 62 2e-08 UniRef50_A0K0Q9 Transcriptional regulator, AraC family n=2 Tax=A... 62 2e-08 UniRef50_C3UVB3 Putative AraC family transcriptional regulator n... 62 2e-08 UniRef50_A5V5G7 Transcriptional regulator, AraC family n=1 Tax=S... 62 2e-08 UniRef50_B3QCR7 Transcriptional regulator, AraC family n=2 Tax=R... 62 3e-08 UniRef50_B6B515 Transcriptional regulator, AraC family n=1 Tax=R... 62 3e-08 UniRef50_Q07KT1 Transcriptional regulator, AraC family n=1 Tax=R... 62 3e-08 UniRef50_A5VE15 Transcriptional regulator, AraC family n=1 Tax=S... 62 3e-08 UniRef50_Q9AJR3 Transcriptional activator n=2 Tax=Proteobacteria... 62 3e-08 UniRef50_Q89CX9 Transcriptional regulatory protein n=1 Tax=Brady... 62 3e-08 UniRef50_D0LFC4 Helix-turn-helix-domain containing protein AraC ... 62 4e-08 UniRef50_A1UF63 Transcriptional regulator, AraC family n=4 Tax=M... 61 5e-08 UniRef50_P31778 Regulatory protein hrpB n=70 Tax=Ralstonia RepID... 61 5e-08 UniRef50_Q0B345 Transcriptional regulator, AraC family n=5 Tax=B... 61 6e-08 UniRef50_Q0S024 Transcriptional regulator, AraC family protein n... 60 9e-08 UniRef50_A1WJE1 Transcriptional regulator, AraC family n=1 Tax=V... 60 9e-08 UniRef50_A1T1Y4 Transcriptional regulator, AraC family n=1 Tax=M... 60 1e-07 UniRef50_B5IIP6 Putative transcriptional regulator n=1 Tax=Cyano... 60 1e-07 UniRef50_B9QYF5 Putative uncharacterized protein n=1 Tax=Labrenz... 60 1e-07 UniRef50_C1BBD9 Putative AraC family transcriptional regulator n... 60 1e-07 UniRef50_Q07S23 Transcriptional regulator, AraC family n=2 Tax=R... 60 1e-07 UniRef50_Q05092 XylDLEGF operon transcriptional activator 2 n=2 ... 60 1e-07 UniRef50_C6WK40 Transcriptional regulator, AraC family n=1 Tax=A... 60 1e-07 UniRef50_B4EDN0 AraC family regulatory protein n=1 Tax=Burkholde... 60 1e-07 UniRef50_A0NVQ0 Transcriptional regulator, AraC family protein n... 60 1e-07 UniRef50_A4EX82 Transcriptional regulator, AraC family protein n... 60 1e-07 UniRef50_Q5LPA0 Transcriptional regulator, AraC family n=1 Tax=R... 60 1e-07 UniRef50_A3NKW1 HrpB n=22 Tax=Burkholderia pseudomallei RepID=A3... 60 2e-07 UniRef50_C5ALL5 HrpB n=5 Tax=Burkholderia RepID=C5ALL5_BURGB 59 2e-07 UniRef50_A1ULB3 Transcriptional regulator, AraC family n=3 Tax=M... 59 2e-07 UniRef50_A1K6W1 Putative AraC-family transcriptional regulator n... 59 2e-07 UniRef50_Q47CB9 Transcriptional regulator, AraC family n=1 Tax=D... 59 2e-07 UniRef50_Q0SCE6 Transcriptional regulator, AraC family protein n... 59 3e-07 UniRef50_A6T9P9 Positive regulator for rhaBAD operon n=3 Tax=Kle... 59 3e-07 UniRef50_A3PVV2 Helix-turn-helix-domain containing protein, AraC... 58 4e-07 UniRef50_A3K5U5 Helix-turn-helix, AraC type n=4 Tax=Rhodobactera... 58 4e-07 UniRef50_Q0K6C4 Transcriptional regulator, AraC-family n=3 Tax=C... 58 5e-07 UniRef50_B3QH76 Transcriptional regulator, AraC family n=3 Tax=R... 58 5e-07 UniRef50_Q3BW17 AraC-type transcriptional regulator HrpX n=54 Ta... 58 6e-07 UniRef50_Q89JG6 Blr5317 protein n=1 Tax=Bradyrhizobium japonicum... 58 6e-07 UniRef50_B1YXB0 Transcriptional regulator, AraC family n=2 Tax=B... 58 6e-07 UniRef50_UPI0001B53BB4 transcriptional regulator, AraC family pr... 58 6e-07 UniRef50_Q1ZAE3 Putative uncharacterized protein n=1 Tax=Photoba... 58 6e-07 UniRef50_A3K773 Transcriptional regulator, AraC family protein n... 58 6e-07 UniRef50_B9KUI9 Helix-turn-helix-domain containing protein, AraC... 57 8e-07 UniRef50_Q0SDR9 Transcriptional regulator, AraC family protein n... 57 9e-07 UniRef50_Q4KE48 Transcriptional regulator, AraC family n=7 Tax=P... 57 9e-07 UniRef50_B9K3F5 Transcriptional regulator AraC family n=1 Tax=Ag... 57 1e-06 UniRef50_C3MHY3 Putative transcriptional regulator, AraC family ... 57 1e-06 UniRef50_B9TJI8 Regulatory protein hrpB, putative (Fragment) n=1... 56 2e-06 UniRef50_A5V473 Helix-turn-helix-domain containing protein, AraC... 56 2e-06 UniRef50_B3SEQ8 Putative uncharacterized protein (Fragment) n=1 ... 56 2e-06 UniRef50_A5EL73 Transcriptional regulator, AraC family n=2 Tax=B... 56 2e-06 UniRef50_A6B9E2 Transcriptional regulator, AraC family n=5 Tax=G... 56 2e-06 UniRef50_Q89FI3 Transcriptional regulatory protein n=3 Tax=Brady... 56 2e-06 UniRef50_Q0I7Z5 Transcriptional regulator, araC family domain pr... 56 2e-06 UniRef50_Q6FBB1 Putative transcriptional regulator (AraC family)... 56 2e-06 UniRef50_Q5HR73 Transcriptional regulator, AraC family n=7 Tax=S... 55 3e-06 UniRef50_A3VW30 Transcriptional regulator, AraC family protein n... 55 4e-06 UniRef50_Q2IVS4 Transcriptional regulator, AraC family n=2 Tax=R... 55 4e-06 UniRef50_A4CW16 Transcriptional regulator, AraC family protein n... 55 4e-06 UniRef50_Q0SE50 Transcriptional regulator, AraC family protein n... 55 4e-06 UniRef50_A9IG97 Transcriptional regulator, AraC family n=4 Tax=P... 55 4e-06 UniRef50_B8H6K6 Transcriptional regulator, AraC family n=2 Tax=A... 55 5e-06 UniRef50_A5KJJ5 Putative uncharacterized protein n=1 Tax=Ruminoc... 55 5e-06 UniRef50_B3CIZ6 Sensor protein n=2 Tax=Bacteroides RepID=B3CIZ6_... 55 5e-06 UniRef50_D0CKC8 AraC-type DNA-binding domain-containing protein ... 55 6e-06 UniRef50_C9PGF5 Transcriptional regulator AraC family n=1 Tax=Vi... 54 6e-06 UniRef50_Q3AVD9 Transcriptional regulator, AraC family n=2 Tax=S... 54 6e-06 UniRef50_Q6W1W1 Probable AraC family transcriptional regulatory ... 54 7e-06 UniRef50_Q2SKP6 Transcriptional regulator containing an amidase ... 54 8e-06 UniRef50_Q9EWL0 Putative transcriptional regulator n=2 Tax=Strep... 54 1e-05 UniRef50_A6D6J4 Transcriptional regulator, AraC/XylS family prot... 54 1e-05 UniRef50_A5VE01 Helix-turn-helix-domain containing protein, AraC... 54 1e-05 UniRef50_A9BWE8 Transcriptional regulator, AraC family n=2 Tax=c... 54 1e-05 UniRef50_B1BZ28 Putative uncharacterized protein n=2 Tax=Firmicu... 54 1e-05 UniRef50_A3WIM7 Probable transcriptional regulator n=1 Tax=Idiom... 53 1e-05 UniRef50_A7NK51 Transcriptional regulator, AraC family n=1 Tax=R... 53 1e-05 UniRef50_Q08YF3 Transcriptional regulator, AraC family n=1 Tax=S... 53 1e-05 UniRef50_A1ZYI4 Putative transcriptional regulator n=2 Tax=Bacte... 53 2e-05 UniRef50_B2I1B8 AraC-type DNA-binding domain-containing protein ... 53 2e-05 UniRef50_B4SK91 Putative sigma54 specific transcriptional regula... 53 2e-05 UniRef50_UPI0001909603 transcriptional regulator, AraC family pr... 53 2e-05 UniRef50_C6QDX3 Transcriptional regulator, AraC family n=1 Tax=H... 53 2e-05 UniRef50_Q7W554 Transcriptional regulator n=4 Tax=Bordetella Rep... 52 2e-05 UniRef50_C6RKI0 Transcriptional regulator, AraC family n=2 Tax=A... 52 2e-05 UniRef50_Q0KJU2 Positive transcriptional regulator for anthranil... 52 2e-05 UniRef50_UPI0001B566E3 AraC family transcriptional regulator n=1... 52 3e-05 UniRef50_C6LKP8 Transcriptional regulator, AraC family n=1 Tax=B... 52 3e-05 UniRef50_A1SHQ2 Transcriptional regulator, AraC family n=1 Tax=N... 52 3e-05 UniRef50_D2MMM4 Transcriptional regulator, AraC family n=1 Tax=B... 52 3e-05 UniRef50_Q05X95 Transcriptional regulator, AraC family protein n... 52 4e-05 UniRef50_A7V223 Sensor protein n=2 Tax=Bacteroides RepID=A7V223_... 52 4e-05 UniRef50_Q3A5L7 Transcriptional regulator, AraC family n=12 Tax=... 52 4e-05 UniRef50_A5INH3 Transcriptional regulator, AraC family n=5 Tax=T... 52 5e-05 UniRef50_Q4V1B1 MSM (Multiple sugar metabolism) operon regulator... 51 5e-05 UniRef50_Q3JGA1 AraC family regulatory protein n=57 Tax=Bacteria... 51 5e-05 UniRef50_B6WPQ1 Putative uncharacterized protein n=1 Tax=Desulfo... 51 6e-05 UniRef50_B8LAL9 Transcriptional regulator n=1 Tax=Stenotrophomon... 51 6e-05 >UniRef50_P36547 HTH-type transcriptional regulator eutR n=115 Tax=Bacteria RepID=EUTR_ECOLI Length = 350 Score = 732 bits (1889), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/350 (100%), Positives = 350/350 (100%) Query: 1 MKKTRTANLHHLYHEPLPENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPG 60 MKKTRTANLHHLYHEPLPENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPG Sbjct: 1 MKKTRTANLHHLYHEPLPENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPG 60 Query: 61 KFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEI 120 KFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEI Sbjct: 61 KFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEI 120 Query: 121 ATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKA 180 ATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKA Sbjct: 121 ATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKA 180 Query: 181 ALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRR 240 ALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRR Sbjct: 181 ALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRR 240 Query: 241 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE 300 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE Sbjct: 241 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE 300 Query: 301 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG Sbjct: 301 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 >UniRef50_A1VQJ8 Transcriptional regulator, AraC family n=4 Tax=Burkholderiales RepID=A1VQJ8_POLNA Length = 347 Score = 228 bits (580), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 132/328 (40%), Positives = 186/328 (56%), Gaps = 14/328 (4%) Query: 28 EVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQ 87 E + + Q D +HA +TAW+Q YDQ+ G FHG TE+ + +QVF E+T A+RQ Sbjct: 24 ESPRIRKVQAHDADDHARNLTAWEQRYDQVTRGPFHGTLTELRMPAMQVFMEHTSQAVRQ 83 Query: 88 SCLVWPNSFWFGIPA---TRGEQGFIGSQC---LGSAE-IATRPGGTEFELSTPDDYTIL 140 SC VWP++FWFG+P T GE+ + ++ LG A+ I RPG EFEL TP DY I Sbjct: 84 SCCVWPDAFWFGVPGGANTAGERSGMNARINGRLGDADTIMVRPGNREFELLTPADYAIY 143 Query: 141 GVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFC--ENPE 198 G+V+ D + A+ L + R + L V E + A QQ LA + Sbjct: 144 GIVIKRDSLLVTASQLGCRIDWAQLERAE-VLHVAESARLA----CQQTLARLILQGRAD 198 Query: 199 NLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVT 258 + QP + +M + +A + +A S S +R+++RAR+YVL + + VT Sbjct: 199 SEGQPVASVACAEQAVMLAVLSMLDASEVDSAVSNSFMRRQRIVARARDYVLGHRDQLVT 258 Query: 259 VLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQW 318 V +LC +LHVSRRTLQ F +L I P +L+ IRLN RREL S + TV+D A W Sbjct: 259 VPELCERLHVSRRTLQYCFEDVLAISPIQYLRLIRLNGARRELRERCSDARTVRDIAADW 318 Query: 319 GFWHLGQFATDYQQLFSEKPSLTLHQRM 346 GFWH QF++DY++LF + PS +L QRM Sbjct: 319 GFWHFSQFSSDYRKLFGQSPSESLRQRM 346 >UniRef50_A6VSI6 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VSI6_MARMS Length = 324 Score = 203 bits (517), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 122/328 (37%), Positives = 175/328 (53%), Gaps = 14/328 (4%) Query: 20 NLKLTPK----VEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQ 75 NLK PK + V + D HA +T WQQ YDQ+ G F+G E+ D +Q Sbjct: 4 NLKNAPKEGFPPRISKVRLSEAHDADLHASNLTNWQQEYDQISRGSFYGRIVELPFDGLQ 63 Query: 76 VFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPD 135 VF E+T AL+Q C+VWP+S W GIP E+ I + I RPG +F+LSTP Sbjct: 64 VFCEHTSQALQQKCVVWPDSVWLGIPLVDQEESRINGLTINPNNIMCRPGDCDFQLSTPQ 123 Query: 136 DYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCE 195 DY + G+V+ + + A +H D L L V ++ V+ LA Sbjct: 124 DYDLYGLVVDRSKLIKMAA-IHGVDLNWKELTECGRLGVPDKTLEE----VRFVLARLLS 178 Query: 196 NPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSE 255 N P +++ D ++MA+ +L+ P A++ S+ ++++ AR+++ ++ E Sbjct: 179 VQNNTTPPRLQQ---DIVMMALLEVLKVETPQ-PAKTQSYYHRKKVVDCARQFLDYHLDE 234 Query: 256 PVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAA 315 PVTV LC +VSRRTLQ +F +ILG+ P +L+ RLN VRR L+ V D A Sbjct: 235 PVTVTQLCEITNVSRRTLQYSFESILGVSPIQYLRISRLNGVRRSLVQA-KDGQAVSDIA 293 Query: 316 MQWGFWHLGQFATDYQQLFSEKPSLTLH 343 QWGFWHL QFA DY+ LF E+PS TL Sbjct: 294 AQWGFWHLSQFAKDYKLLFGEQPSQTLE 321 >UniRef50_C4KY56 Ethanolamine operon transcriptional activator EutR n=52 Tax=Burkholderia RepID=C4KY56_BURPS Length = 342 Score = 196 bits (497), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 119/311 (38%), Positives = 169/311 (54%), Gaps = 9/311 (2%) Query: 39 DVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWF 98 D E A + W+Q YDQL G+F G TE+ LD ++VFRE T LRQ+C V +++WF Sbjct: 36 DADEQARNLIGWRQTYDQLAAGRFVGTLTELPLDTMKVFRETTSHTLRQACEVRGDAYWF 95 Query: 99 GIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHN 158 GIP R I ++ + + +A RPG EFEL TP ++I GVV+ V+ R A + Sbjct: 96 GIPLARDGAARIDARPIAADALAFRPGNVEFELLTPAQFSIYGVVVRGAVLRRYAQEVER 155 Query: 159 P--DRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMA 216 D L ++ + V E L + Q L + +P D Sbjct: 156 CGLDERLPLV---PVVRVGEARLTRLCALLAQRLDD-ADAMSAAGEPLSDCARNDLQAEV 211 Query: 217 MGAMLEEAQPMVTAESISHQSYRR-LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQN 275 + A+ + S+ H S RR +++ AR+YVL + S PV V +LC QLHVSRRTLQ Sbjct: 212 LAALFDLCASPAADASVEHSSRRRKIVAAARDYVLAHRSRPVGVPELCEQLHVSRRTLQY 271 Query: 276 AFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFS 335 F +LG+ P +L+ +RLN VRR+L + +V+DAA WGFWHL QFATDY+++F Sbjct: 272 CFQDVLGMAPATYLRALRLNGVRRDLRG--RAAASVQDAAAAWGFWHLSQFATDYRRMFG 329 Query: 336 EKPSLTLHQRM 346 +PS TL + Sbjct: 330 ARPSETLRDAL 340 >UniRef50_Q1N3C0 HTH-type transcriptional regulator eutR n=1 Tax=Bermanella marisrubri RepID=Q1N3C0_9GAMM Length = 321 Score = 181 bits (460), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 106/305 (34%), Positives = 158/305 (51%), Gaps = 12/305 (3%) Query: 39 DVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWF 98 D EHA +T WQQ YDQ+ PG F G E+ L+ IQVF+E+T ++ Q C VW +S W Sbjct: 23 DADEHAHNLTNWQQEYDQVSPGAFEGSIKELQLNGIQVFKEFTSQSVFQKCNVWSDSLWI 82 Query: 99 GIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHN 158 G+P ++ EQ I L S ++ RPG +F L TP + I G+V+ + +++ N Sbjct: 83 GLPESKPEQSRINGHHLQSHQVMCRPGDIDFSLMTPSQFNIFGIVIDQSLLS-------N 135 Query: 159 PDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMG 218 + + Q +L KA + + L +P + + + + +LL+ Sbjct: 136 IEDSDYSSAQQFSLSECISLKAKTYNNLHYLLQRLLMHPHD----GIPEKVCHDLLLLAL 191 Query: 219 AMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFH 278 + + + S + +++ Y+ ++ EPVTV +LC VSRRTLQ +F Sbjct: 192 HDVLTPESVNCLPPTSLKRRNQIVDLTLHYLKQHHDEPVTVTELCTLACVSRRTLQYSFE 251 Query: 279 AILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKP 338 ++LGI P +L+ RLN RR L Q + D A QWGFWHL QFA DY+QLF E P Sbjct: 252 SVLGISPAHFLRISRLNGARRSLRQATEQD-CIADVAAQWGFWHLSQFAKDYKQLFGELP 310 Query: 339 SLTLH 343 S T H Sbjct: 311 SETKH 315 >UniRef50_Q5P0V5 Transcriptional regulator, AraC family, n=3 Tax=Rhodocyclaceae RepID=Q5P0V5_AZOSE Length = 343 Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 106/316 (33%), Positives = 158/316 (50%), Gaps = 10/316 (3%) Query: 31 NVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCL 90 +V Q T D +HA + W+Q YDQL G F G+F E ++QVFRE T + + Sbjct: 22 SVVQLDTRDADDHASCLQHWRQRYDQLSAGLFSGKFEEFWFGNVQVFRERTNQVIHEIGS 81 Query: 91 VWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVIT 150 W S G+P G+ + G + T GG + + TP + ++ V + Sbjct: 82 AWEGSRTVGVPVALDGTGWYCGEACGVDSLITLRGGDDLDYRTPRVHDVVAVTTDTQAFS 141 Query: 151 RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLG 210 A + + D + + N+ + + L F+ +++ PE L P +RK L Sbjct: 142 DYATQVEHRD-IEAEIGNRRVIAATPEQATTLRSFLLTVISSLEATPELLRHPQMRKGLE 200 Query: 211 D----NLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQL 266 +LL A+ L+ A+ S + + ++ RAREY+ ++ EP+TV DLC +L Sbjct: 201 QAIYASLLTAINGSLDAARA-----STPGRGRQLIVDRAREYMSAHIDEPITVADLCTEL 255 Query: 267 HVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQF 326 VSRRTLQ +F IL + P ++L+ +RLN VRR L S V D A QWGFWHL F Sbjct: 256 EVSRRTLQYSFQDILNLNPVSFLRALRLNGVRRALKSAEHGHAAVADIAAQWGFWHLSHF 315 Query: 327 ATDYQQLFSEKPSLTL 342 A DY+ +F E PS TL Sbjct: 316 AADYRTMFGELPSETL 331 >UniRef50_A0B1I5 Transcriptional regulator, AraC family n=25 Tax=Burkholderia RepID=A0B1I5_BURCH Length = 332 Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 109/313 (34%), Positives = 160/313 (51%), Gaps = 16/313 (5%) Query: 35 RQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPN 94 R DV++H L I W Q+Y Q+ PG+F G T++L DD FRE T + Q+ L Sbjct: 26 RSHEDVHDHGLAIAGWHQVYRQMTPGRFKGTVTQVLYDDFHFFRETTNRRVAQTGLAPAG 85 Query: 95 SFWFGIPATRGEQG-FIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITR-- 151 +P + G F G G A +A R G +FE TP+ ++G+ S D++ Sbjct: 86 RTSLAVPLSVPLAGTFQGQPVDGYALLALR-AGEDFEFHTPEGMGLVGISASSDMVDELC 144 Query: 152 QANF-LHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLG 210 +A F R+ H+ R + + AL + + NP L A RK+ Sbjct: 145 EAEFGAAGARRLRHVTR------LSDAQGVALGVRLSALIDDAQRNPGCLEYAATRKMFR 198 Query: 211 DNLLMAMGAMLEEAQPMVTAE--SISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHV 268 D +L G L+ + + E I+H +Y ++SR +++ + EPVTVL+LC L Sbjct: 199 DAML---GMFLDALEQGIGVERRDITHATYSDIVSRCEKHLRDRPEEPVTVLELCRALRC 255 Query: 269 SRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFAT 328 SRRTLQ +F + + P +L+ IRLNAVRR L + +Q + V +AA WGF HLG FA Sbjct: 256 SRRTLQTSFQRVADVTPVGYLRTIRLNAVRRLLRTTSAQQLGVGEAAASWGFTHLGYFAR 315 Query: 329 DYQQLFSEKPSLT 341 +Y+ LF E PS T Sbjct: 316 EYRDLFGELPSQT 328 >UniRef50_C4I2G6 Transcriptional regulator, AraC family n=26 Tax=Burkholderia RepID=C4I2G6_BURPS Length = 344 Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 108/313 (34%), Positives = 157/313 (50%), Gaps = 16/313 (5%) Query: 35 RQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPN 94 R DV++H L I W+Q+Y Q+ PG+F G T++L DD FRE T + Q+ + Sbjct: 38 RSLEDVHDHGLAIAGWRQVYRQMTPGRFRGTVTQVLYDDFHFFRETTNRRVAQTGVSPEG 97 Query: 95 SFWFGIPATRGEQGFIGSQCL-GSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITR-- 151 +P G Q + G A +A RPG +FE TP+ ++G+ + D+I Sbjct: 98 RTSLAVPLLAPLSGTFQRQHVDGYALLALRPG-EDFEFHTPEGMRLVGISAAPDMIEELC 156 Query: 152 QANFLHNPDRV-LHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLG 210 +A F R H+ R + + AAL + + NP L RK+ Sbjct: 157 EAEFGTRGHRAPRHVTR------LTHEQGAALGARLSSYIDDAQRNPTWLAYDGTRKMFR 210 Query: 211 DNLLMAMGAMLEEAQPMVTAE--SISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHV 268 D +L G L+ V E I+H +Y ++ R Y+ EPVTVL+LC L Sbjct: 211 DAML---GVFLDALSGAVGEERRDITHATYSDIVGRCERYLRARPEEPVTVLELCRALRC 267 Query: 269 SRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFAT 328 SRRTLQ +F + + P +L+ IRLNAVRR L + + ++ V +AA +WGF HLG FA Sbjct: 268 SRRTLQTSFQRVADVTPVTYLRTIRLNAVRRLLRTTSADALCVGEAAARWGFTHLGYFAR 327 Query: 329 DYQQLFSEKPSLT 341 +Y+ LF E PS T Sbjct: 328 EYRGLFGELPSQT 340 >UniRef50_Q87WL8 Transcriptional regulator, AraC family n=5 Tax=Proteobacteria RepID=Q87WL8_PSESM Length = 373 Score = 167 bits (422), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 104/316 (32%), Positives = 160/316 (50%), Gaps = 21/316 (6%) Query: 36 QTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNS 95 QT D+ EH ++ WQ YDQ+ PG F GE TE D +Q+ R+ + AL +S + W + Sbjct: 68 QTCDIDEHGRNLSGWQVRYDQVTPGGFEGELTEFRSDWLQLVRDRSNQALVKSGMAWKGA 127 Query: 96 FWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANF 155 F +P + F L + G ELSTP LGV + E + Sbjct: 128 IIFALPLSANGPAFCAGHTLQEPSLIVAHGENLPELSTPLQLDALGVAIEEGALA----- 182 Query: 156 LHNPDRVLHMLRNQ-SALEVKEQHKAALWG--FVQQALATFCENPENLHQPAVRKVLGDN 212 H L Q S E+ + K V+ A +N N Q ++K+ D+ Sbjct: 183 --------HALERQGSRFEITDLPKCYRLADPTVRTRFAALFDNLLNGEQACLQKLEYDS 234 Query: 213 LLMAM--GAMLEEAQPMVTAES--ISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHV 268 + + ML+ + + E+ ++ + ++++ RAR+Y L ++ EP+++LD+CN + Sbjct: 235 IRRGIRDAVMLQVLELVAPDEAPPLNPTARKKMVDRARDYALAHLDEPLSILDVCNHIGT 294 Query: 269 SRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFAT 328 SRR LQ F LGI P A+L+ +RLNA RREL S+ V+ A +WGFWHL +F++ Sbjct: 295 SRRKLQYCFQETLGINPVAFLRTLRLNAARRELRES-SRVELVQTVAARWGFWHLSRFSS 353 Query: 329 DYQQLFSEKPSLTLHQ 344 DY+ LF E PS TL + Sbjct: 354 DYRTLFGETPSQTLQR 369 >UniRef50_A0Y3G2 Transcriptional regulator, AraC family protein n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0Y3G2_9GAMM Length = 319 Score = 164 bits (414), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 109/332 (32%), Positives = 153/332 (46%), Gaps = 51/332 (15%) Query: 37 TTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSF 96 T D+ E A + WQQ YDQ+ G F G + +I VF EYT ALRQ C++ NS Sbjct: 17 THDIDEQASNLINWQQKYDQVSEGGFFGCIEGVAHSNIHVFEEYTERALRQQCVIADNSI 76 Query: 97 WFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFL 156 W GIP T E G L S + R ++FEL TP+ + I GVV+ Sbjct: 77 WLGIPKTSCESKINGLDVL-SNQFMCRSSHSDFELITPEKFNIYGVVI------------ 123 Query: 157 HNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKV-------- 208 N ++E Q L G Q + F ++ P + + Sbjct: 124 -----------NWQSIECMAQ----LQGINLQNMNAFGAERLTVNNPTLNRARSIINSMV 168 Query: 209 ------LGDNL------LMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEP 256 L NL ++A+ + E+Q A S H+ + ++ + + ++ + Sbjct: 169 NHDAHGLNANLQQEMLYMLALNLLKTESQQHSIAPSYKHR--KAVVDKVKAHIKVDPQST 226 Query: 257 VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAM 316 VT+ LC HVSRRTLQ +F +ILGI P +L+ RLN VRREL Q+ + A Sbjct: 227 VTITQLCELTHVSRRTLQYSFESILGINPLRFLRLTRLNNVRREL-KVVGQTKPISVIAA 285 Query: 317 QWGFWHLGQFATDYQQLFSEKPSLTLHQRMRE 348 WGFWH GQF DY QLF E PS T+ ++E Sbjct: 286 NWGFWHAGQFTKDYTQLFGENPSQTIANTLKE 317 >UniRef50_A2SII1 Transcriptional regulator, AraC family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SII1_METPP Length = 328 Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 105/314 (33%), Positives = 155/314 (49%), Gaps = 30/314 (9%) Query: 36 QTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNS 95 ++TDV EHA ++ W+Q YDQL G F G E + +Q+FRE T LRQ C VW + Sbjct: 28 RSTDVDEHASHLSGWRQAYDQLGSGGFEGRLDEAVSAGVQLFRERTSQRLRQRCEVWQGA 87 Query: 96 FWFGI----PATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITR 151 W GI +R + +G+ + ++ GG FEL +P + I+G V ++R Sbjct: 88 LWCGITVADDGSRLDGRLVGADGV---MVSGEDGG--FELVSPAGHDIVGFV-----VSR 137 Query: 152 QANFLHNPDRVLHMLRNQSALEVKEQHKAALWGF---VQQALATFCENPENLHQPAVRKV 208 +A H P LE+ A W + A L + V Sbjct: 138 EALQSHAP-----------GLELPRAGGAGWWAADPARRHAALVHARAILVLAEAGVSCD 186 Query: 209 LGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHV 268 L +L + +L+ P E + + RRL+++ RE + +V +LC LHV Sbjct: 187 LRSAMLDVVAGLLDARGPE-RRERGNASARRRLVAQVRERIEAAPDRAPSVPELCAALHV 245 Query: 269 SRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFAT 328 SRRTLQ AF +G+ P A+L+ +RLN VRR L+ + +TV+ AA WGFW+L FA Sbjct: 246 SRRTLQYAFEDEVGVNPLAYLRSVRLNGVRR-LLREAAPGLTVQRAAAHWGFWNLSAFAG 304 Query: 329 DYQQLFSEKPSLTL 342 DY++ F E+ S TL Sbjct: 305 DYRRQFGERASETL 318 >UniRef50_A1TWG5 Transcriptional regulator, AraC family n=2 Tax=Acidovorax RepID=A1TWG5_ACIAC Length = 345 Score = 150 bits (379), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 112/322 (34%), Positives = 159/322 (49%), Gaps = 17/322 (5%) Query: 35 RQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDD--IQVFREYTGLALRQSCLVW 92 R + DV EHA ++ W Q YDQL G+F G E+ L +QVF E+T Q C W Sbjct: 25 RASEDVDEHADQLSDWSQQYDQLRGGRFAGRVRELWLGGPRLQVFHEHTSPPTSQQCAPW 84 Query: 93 PNSFWFGIPATRGEQG--FIGSQCLGSAE--IATRPGGTEFELSTPDDYTILGVVLSEDV 148 S WFG+P R + F GS+ A+ + F L TP+D+ I GVV+ ++ Sbjct: 85 RGSVWFGVPDARCARPLHFCGSERRTDAQRFVLRARASDGFTLRTPEDFGIYGVVMDQEW 144 Query: 149 ITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPE----NLHQPA 204 + +A+ + + + A+ V AAL ++ L PE HQ Sbjct: 145 LRAEADAMGLRGAAVLLSSPAHAVPVDAAAHAALCATIESLLRIAEAAPEPAGTGRHQAL 204 Query: 205 VRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLD-LC 263 VR+ LL + A P V + Q L+ AR + + +D LC Sbjct: 205 VRR-----LLRQLCGDPAAAAPAVAPPQGAAQRRFALVMAARAWAGQPCCGDARDVDALC 259 Query: 264 NQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHL 323 LHV+RRTLQN FHA+LG P +LK +RLNA RR L + + TV++ A +WGF+H+ Sbjct: 260 RHLHVTRRTLQNHFHAVLGQSPAEFLKAVRLNACRRALRTA-APGETVQEIAERWGFFHM 318 Query: 324 GQFATDYQQLFSEKPSLTLHQR 345 G F+ DY+ LF E PS TL +R Sbjct: 319 GHFSQDYKTLFGEAPSQTLRRR 340 >UniRef50_B9Z415 Transcriptional regulator, AraC family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z415_9NEIS Length = 316 Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 90/304 (29%), Positives = 150/304 (49%), Gaps = 5/304 (1%) Query: 39 DVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWF 98 D +HA + W Q+YDQL G+F + ++ +FRE + Q + Sbjct: 10 DAQQHAAALPYWNQVYDQLTAGRFQSSLERAHVGNLVLFREVLNQRVVQHGQTPADMLHV 69 Query: 99 GIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLS-EDVITRQANFLH 157 IP G + + + I G EF P + + V ++ ED+ T F Sbjct: 70 SIPLAMPNAGSLQGCPVNANSIMALHGNEEFVFHLPPNVDSIQVSITYEDLDTLAPQF-- 127 Query: 158 NPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAM 217 +R+ Q + ++E H A + + A +NP+ L +K++ + + Sbjct: 128 -AERLARTRNRQPVIPLREGHLAGIRATLPGAFEQVVQNPDLLEFTGTQKIIKHQFMSLL 186 Query: 218 GAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAF 277 +L + P ++++ ++ ++ R++ VL + EPVTVL+LC +L +SRRTLQN+F Sbjct: 187 LELLNDVAPD-ERYNLTYATHSDIVKRSQAIVLASPDEPVTVLELCQKLRISRRTLQNSF 245 Query: 278 HAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEK 337 I P +L+ IRLNAVRR L S + ++++AA WGF+HLG F+ DY++LF E Sbjct: 246 QLIADTTPVDYLRSIRLNAVRRMLQSGSPECTSIREAAGYWGFYHLGHFSRDYRRLFDEL 305 Query: 338 PSLT 341 PS T Sbjct: 306 PSET 309 >UniRef50_A6W073 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W073_MARMS Length = 322 Score = 147 bits (371), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 94/318 (29%), Positives = 168/318 (52%), Gaps = 21/318 (6%) Query: 35 RQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPN 94 ++T D+ EHA ++ W+ YDQ+ G+F G TE+ L +Q+ R+ + A+ +S P+ Sbjct: 18 KETIDIEEHAGNMSGWKVRYDQISAGQFAGSITELNLTGMQLIRDKSNQAIIKSGESIPD 77 Query: 95 SFWFGIP-ATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQA 153 + F +P A E + + + EL TP + ++ + S+D++ Sbjct: 78 TIMFTLPLAPAAENLYCEGHIFTPSNLLVSNWRNLPELKTPANLDVICINASQDLL---Q 134 Query: 154 NFLHNPDRVLHMLRNQSALEV-KEQHKAALWGFVQQALATFCENPENLHQP-----AVRK 207 N L + +L + + ++ K ++ L ++ + P NL QP A+RK Sbjct: 135 NALDRQNIILDLSDSAHCYQLDKIGNQDELLTLLKTVMT-----PNNL-QPLLEHEAIRK 188 Query: 208 VLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLH 267 + D LL + ++ E + + ++ + +R++ +AR+YVL N+++ +++DLCN + Sbjct: 189 GIRDTLLQNLLELINEEE----VQYLTSLARKRIVDKARDYVLANINDNPSIVDLCNAVG 244 Query: 268 VSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFA 327 SRR LQ F LGI P +L+ IRLN+ REL+ + V++ A +WGF HL +FA Sbjct: 245 ASRRKLQYCFQETLGINPVTYLRTIRLNSAHRELLM-QDGTKQVQNIAAKWGFLHLSRFA 303 Query: 328 TDYQQLFSEKPSLTLHQR 345 DY+QLF E PS T+ ++ Sbjct: 304 NDYKQLFGELPSDTIKRK 321 >UniRef50_Q5P5Q4 Probable regulatory protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5Q4_AZOSE Length = 342 Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/333 (29%), Positives = 156/333 (46%), Gaps = 26/333 (7%) Query: 24 TPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGL 83 TP+ + + T D +HA ++ W Q Y QL G F GE EI + IQVF+E Sbjct: 11 TPRRRNERISIISTDDPCQHAASLRDWSQDYLQLSKGAFSGEIVEISVGPIQVFKETIYQ 70 Query: 84 ALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVV 143 + + NS+ G+P + E G+ + L + T E TP + TIL V Sbjct: 71 CVDEKANPRCNSYTVGVPVSVTENGYWQGRHLERDSLITLRPNEELHFRTPRESTILVTV 130 Query: 144 LSEDVITRQANFLHNPDRVLHMLRNQSALEVKE----QHKAALWGFVQQA--------LA 191 + D A +R+ + ++V + A L V Q+ LA Sbjct: 131 I--DCTAFDA-----------FVRDTAGVDVSRLIAPSNAAGLPADVAQSYRVTLGTVLA 177 Query: 192 TFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLE 251 + PE A K + + ++ A L+ P+ + +H R ++ RAR Y++ Sbjct: 178 SVAATPEIFEHQASAKSVAETVMSASRNALQAKSPLNESPRTTHAVQRAIVERARSYIVV 237 Query: 252 NMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTV 311 N P TV +L + L +SRR L +AF +LGI +L+ +RL+ VR+EL+ + +V Sbjct: 238 NRENPPTVAELSSYLKMSRRGLHHAFVNVLGINVATFLRYVRLHGVRKELLRA-GPTDSV 296 Query: 312 KDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 A +WGFWH+G F++ Y+ LF E PS T+ + Sbjct: 297 SSIACKWGFWHMGMFSSYYKSLFGETPSTTMRK 329 >UniRef50_A0B2C1 Transcriptional regulator, AraC family n=17 Tax=Burkholderia RepID=A0B2C1_BURCH Length = 320 Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 90/312 (28%), Positives = 152/312 (48%), Gaps = 8/312 (2%) Query: 32 VHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLV 91 +HQR D HA + W Q YDQ+ G + +LD +Q+F+E + + Q + Sbjct: 4 LHQR-FDDADRHAEALRGWNQRYDQIGSGAYRSAVKHAVLDGVQLFQETANVRIIQRGCL 62 Query: 92 WPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITR 151 FG+P T G + I GG FEL +PDD +++GVV+ +++ + Sbjct: 63 PHGHTVFGMPLTGSGTFAFGGARIERGTIVMARGGIPFELHSPDDMSLIGVVVEPELMQQ 122 Query: 152 --QANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVL 209 A + R L + + +E+ L +++ L+ Q A+R + Sbjct: 123 IEDAADVRLDARALRHGVVEVPVAARERASVQLATLLERVLSAPDTFDAARAQCAIRADV 182 Query: 210 GDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVS 269 G+ L+ + + E + ++H + ++ R +YV+E+ PV +L LC QL VS Sbjct: 183 GNVLVDLLTYRMPE-----PSNRLTHACHADIVRRVHDYVIEHPEAPVDILSLCTQLRVS 237 Query: 270 RRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATD 329 RRT+QN+F +++ P + + +RL VRR L+ + + +AA +WGF HLG FA+ Sbjct: 238 RRTMQNSFQSVVQTSPLNYTRSLRLAQVRRLLLDTRQSDLPISEAAARWGFLHLGHFASV 297 Query: 330 YQQLFSEKPSLT 341 Y+ F E PS T Sbjct: 298 YKAQFGELPSAT 309 >UniRef50_A9AKQ9 AraC family transcriptional regulator n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9AKQ9_BURM1 Length = 321 Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 32/329 (9%) Query: 31 NVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCL 90 + H + EH + ++Q YDQL PG F G EI L + VFRE + RQ Sbjct: 8 DFHSDDIDGLSEH---LRSFQWRYDQLDPGTFLGRIAEIDLPGVTVFREQLSRSTRQVGT 64 Query: 91 VWPNSFWFGIP----------ATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTIL 140 P + +P R +G++G AE+ EF ++ D+ Sbjct: 65 TPPGTLGLALPWNQSGEIWANGVRMTEGYVGVSAY--AEV-------EFFTASESDFAY- 114 Query: 141 GVVLSEDVITRQANFLHNPDRVLHMLRNQSALEV-KEQHKAALWGFVQQALATFCENPEN 199 V++ D I A + LR+ + + + E K AL A PE Sbjct: 115 -VLIDSDAIDHAAA--RTGVALPRDLRDSATIALLPEGAKLALRQLFAVAHGRLGAPPET 171 Query: 200 LHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTV 259 LH R++L D ++ +E ++A S R++ RARE + + +P+++ Sbjct: 172 LHSDVARRLLADQFVLEF---IEVFSSGISATERSVAFRTRMVKRAREVMHGHTEDPLSI 228 Query: 260 LDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWG 319 LD+C Q+ VSRR L F +LG P A+++ IRLN RRE+++ ++ +V + A +WG Sbjct: 229 LDVCKQVGVSRRKLNYCFQDVLGTTPLAYMRAIRLNGARREMLA-CARGDSVSEIAGKWG 287 Query: 320 FWHLGQFATDYQQLFSEKPSLTLHQRMRE 348 FWH G+FATDY++ F E PS TL QR RE Sbjct: 288 FWHFGRFATDYKRHFGELPSQTL-QRGRE 315 >UniRef50_A7JZD1 Ethanolamine operon regulatory protein n=3 Tax=Vibrio RepID=A7JZD1_VIBSE Length = 354 Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 98/322 (30%), Positives = 163/322 (50%), Gaps = 35/322 (10%) Query: 37 TTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSF 96 T D + A ++ WQQ YDQL G+F G+ E + VFRE + +LRQ C V Sbjct: 55 TKDANQQAASLINWQQEYDQLSDGRFLGQIRERRFPNFHVFREDSNRSLRQQCRVEEGGI 114 Query: 97 WFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFL 156 W G+ A SQ ++++ R GG +FEL TP+ ++I G+VL Sbjct: 115 WLGLSAENKPLHLNHSQ-FNASQLLLRQGGADFELMTPEQFSIYGIVLDR---------- 163 Query: 157 HNPDRVLHMLRNQSALEVKEQHKAALWG----FVQQA---LATFCENPENLHQPAVRKVL 209 +++ ++ Q L+ + L G +QQ L T E+ + +V+ Sbjct: 164 ----KLVQIIEKQLELDGIGCNTPHLAGPTEKHIQQLKFYLGTLLGPTESRWSDSTHQVV 219 Query: 210 GDNLLMAMGAMLEEAQPMVTAE-SISHQSYRRLLSRAREYVLE-NMSEPVTVLDLCNQLH 267 ++++ + ++ + P + SISH+ + ++ R ++ + + + P+TV +LC+ +H Sbjct: 220 LKDIVLELFSI---SSPSASHPISISHRQH--VMRRIKQQLHDLDYRTPITVSELCDAVH 274 Query: 268 VSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFA 327 VSRRTLQ F P ++ R+RLN VRR L SP + T+ + A +GF+HLGQF+ Sbjct: 275 VSRRTLQYTFEHCCNTSPKQFIHRMRLNQVRRVLQSP-EDNRTIAEIAFDFGFFHLGQFS 333 Query: 328 TDYQQLFSEKPSLTLHQRMREW 349 Y++LF E P+ T R+W Sbjct: 334 QSYKRLFGETPTET-----RKW 350 >UniRef50_A5EB19 Transcriptional regulator, AraC family n=2 Tax=Bradyrhizobium RepID=A5EB19_BRASB Length = 325 Score = 140 bits (353), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 96/314 (30%), Positives = 156/314 (49%), Gaps = 10/314 (3%) Query: 34 QRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWP 93 Q + DV EH + W+ YDQ+ G F G FT I L +Q+FRE T +RQ + Sbjct: 3 QTTSADVDEHCAQLGGWRLTYDQISAGAFRGSFTLISLPRLQIFREVTSQQVRQYGRLDA 62 Query: 94 NSFWFGIP-ATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQ 152 + F G+ + G G+ A + + +F TP + + G+ LS +I Sbjct: 63 DCFSVGLAWHSGGPLSLNGTGITQDALVVSFDADIDF--CTPRAFELRGMTLSTQLIEAI 120 Query: 153 ANFL--HNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLG 210 A L P + H +R A+ L + A E LH + + L Sbjct: 121 AGQLAIELPADLKHRMR---AIAAPADALRRLRAALAAMDAVLGAPEEFLHDTTISEALQ 177 Query: 211 DNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSR 270 D+LL+A+ +L +A+ T+ S + + +R++++A E +L + +P+++LD+C + SR Sbjct: 178 DSLLLAITDLLPDARLCDTSRSAAAR--KRIVAQATEMMLASSDQPLSLLDVCKAVGASR 235 Query: 271 RTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDY 330 R L F +LG P ++ + IRLN VRR+L S + D A++ GFWH QF+ DY Sbjct: 236 RKLSYCFQDVLGTSPVSYWRAIRLNRVRRDLKSRRDPRDGIYDIAVRHGFWHFSQFSLDY 295 Query: 331 QQLFSEKPSLTLHQ 344 ++ F+E PS TL + Sbjct: 296 KRHFAELPSETLRR 309 >UniRef50_A1SRM6 DNA-binding helix-turn-helix domain-containing transcriptional regulator protein AraC family protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRM6_PSYIN Length = 351 Score = 140 bits (352), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 88/314 (28%), Positives = 151/314 (48%), Gaps = 10/314 (3%) Query: 37 TTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSF 96 T DV + A ++ W+Q Y+Q G+F G E+ L I +F E+T L Q C V NS Sbjct: 22 TFDVNQQAESLIKWEQRYNQHSSGRFSGYLDELKLGGIHLFEEFTNQTLLQQCCVKENSL 81 Query: 97 WFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLS------EDVIT 150 W G + + ++ I + + + ++ RP G +FEL TP D+ I G+VL E V Sbjct: 82 WIGF-SLQAQRPKINNNKIAAGQLMMRPSGVDFELMTPQDFHIFGLVLDGKSLQDEMVEF 140 Query: 151 RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLG 210 + +++L N + + L G A F P + + L Sbjct: 141 DAERWQSQKNKILVSEPNHYMIYELAKLIQLLLG--NNHYAAFQNRPSDESNRSRLNKLM 198 Query: 211 DNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSR 270 +L + +L + + V + Q+ ++++S Y+ + P+T+ +LC HVSR Sbjct: 199 PLILSRIADLLAQIESGVKELQVQPQTKQKVISAVSRYIKQTNRYPLTITELCKITHVSR 258 Query: 271 RTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDY 330 R L F LG+ P +++ RLN +RR L+ ++ + + D A+ +GF+H+ F Y Sbjct: 259 RALHYCFEQGLGVSPIQYIRDCRLNEIRRILLRDETE-VIISDLALDFGFFHISTFNAHY 317 Query: 331 QQLFSEKPSLTLHQ 344 +QLF E P+ T+ + Sbjct: 318 KQLFEETPTQTIQR 331 >UniRef50_C6QHZ1 Transcriptional regulator, AraC family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QHZ1_9RHIZ Length = 337 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 96/322 (29%), Positives = 157/322 (48%), Gaps = 19/322 (5%) Query: 24 TPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGL 83 P E +H T+D+ E A + W Q Y+Q+ G+F+G F E +D +Q+FRE T Sbjct: 14 VPAGETAIIHAASTSDIDEQAALLRGWNQTYEQISAGRFNGSFLETQIDCVQLFREVTSN 73 Query: 84 ALRQSCLVWPNSFWFGIPAT-RGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGV 142 +L+Q+ + + G P + G F G C G ++ G +FE +P I+G Sbjct: 74 SLQQTGALPEGTIAVGAPLSLHGSATFCGRSCNGQ-QLHVFSGKDQFEFFSPRGLDIVGF 132 Query: 143 VLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCE---NPEN 199 VL E + ++ H D + ++ + + ++ AAL ++ CE P+ Sbjct: 133 VLDESDL--RSALTH--DELEDVMPSLAIPHLRFADIAAL-NRMRSIFLDVCEILAEPDA 187 Query: 200 LHQPAVR-KVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSR-AREYVLENMSEPV 257 + VR + +L+ A+ + L Q+ R L+ R AR+ + E + Sbjct: 188 SARDRVRLSSMSRDLIAAIVSGLAHG---YGDRFDVPQARRALIVRDARDLISEWSQDLK 244 Query: 258 TVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQ 317 + DLC +L VSRR LQ +F LG+ P+ +++ +R+N RR + + S V +AA Sbjct: 245 GIADLCRELGVSRRALQQSFQDTLGVKPSVYMRAVRMNGARRAIKTESS----VAEAATL 300 Query: 318 WGFWHLGQFATDYQQLFSEKPS 339 WGFWH G+FA DY +F E PS Sbjct: 301 WGFWHFGRFARDYNMMFGELPS 322 >UniRef50_C4KAZ9 Transcriptional regulator, AraC family n=1 Tax=Thauera sp. MZ1T RepID=C4KAZ9_THASP Length = 345 Score = 134 bits (337), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 96/317 (30%), Positives = 150/317 (47%), Gaps = 8/317 (2%) Query: 36 QTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDD-IQVFREYTGLALRQSCLVWPN 94 Q DV + + AW Y+QL PG F G E+ +DD ++V E ++ + Sbjct: 28 QVGDVSDFGRGLLAWNATYEQLAPGCFEGGAEELWIDDGLEVLWETGNRSVWTAGSNRAG 87 Query: 95 SFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQAN 154 GIP G G + ++ PGG +FE+ + + I+ +SE ++ A Sbjct: 88 MVSLGIPVAGGGAGMYCGVPIQDGAVSWLPGGGDFEIFSRERMDIVSATVSESLLCGFAA 147 Query: 155 FLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLL 214 + R + L+ + + L + + + P L PA R + D +L Sbjct: 148 --SDSPRTAEASLQRPFLQQQPRRAGMLRRALIEIVVVARRQPGLLEIPASRAAMRDCVL 205 Query: 215 MAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQ 274 M L+ A TA+ + ++ + RE LE SEP+ + D+C L VSRR+LQ Sbjct: 206 SLMLDTLDRASERPTAD-LRPSVKAWIVRKVRELALERPSEPLQIADICRSLAVSRRSLQ 264 Query: 275 NAFHAILGIGPNAWLKRIRLNAVRREL-ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQL 333 AF ++G+G +L+ +RLNAVRREL ++ S + A +WGFWH+ +FA Y+ L Sbjct: 265 YAFEDLVGMGAVEFLRNVRLNAVRRELRVATGSPDEPIAAIAARWGFWHMPRFAAYYRAL 324 Query: 334 FSEKPSLTLHQRMREWG 350 F E PS T R RE G Sbjct: 325 FGELPSET---RRREGG 338 >UniRef50_B1Z491 Transcriptional regulator, AraC family n=6 Tax=Burkholderia cepacia complex RepID=B1Z491_BURA4 Length = 342 Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 104/313 (33%), Positives = 143/313 (45%), Gaps = 8/313 (2%) Query: 39 DVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWF 98 DV HA W DQL PG F G EI D +Q+ RE AL + S F Sbjct: 34 DVDSHAECTHGWSIRLDQLSPGPFQGTLHEIRFDGMQLLRERVNRALLKRGDQRAGSTSF 93 Query: 99 GIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHN 158 IP G+ G L + G + EL TPD ++ + + D + R +L + Sbjct: 94 SIPLETAGAGYCGGTPLRDKALLVSGGTSLPELRTPDHQDVVLLTVPTDTL-RTLAWLAD 152 Query: 159 PDR---VLHMLRNQSAL-EVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLL 214 D L N++++ V AL + + P RK L D +L Sbjct: 153 EDDDGDCTGTLSNETSIVRVPAARYDALTSLLVAGFDAVDTSERPFALPQARKTLRDAIL 212 Query: 215 MAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQ 274 + + LE A V + + RR++ R RE V+ P+TVLD+C + SRR LQ Sbjct: 213 VELVDALEAAGRPV---RLDPSARRRVVERVRELVVSQPDAPLTVLDVCRAVGASRRKLQ 269 Query: 275 NAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLF 334 F ILG P +L+ +RLN VRREL S +V D A +WGFWHL +FA Y++LF Sbjct: 270 YCFEEILGTHPAWYLRVLRLNGVRRELREQSPSSASVSDVACRWGFWHLSRFAAHYRELF 329 Query: 335 SEKPSLTLHQRMR 347 E PS TL + R Sbjct: 330 GELPSDTLKRPPR 342 >UniRef50_UPI00016AB122 ethanolamine operon transcriptional activator EutR n=1 Tax=Burkholderia pseudomallei 14 RepID=UPI00016AB122 Length = 237 Score = 130 bits (327), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 87/237 (36%), Positives = 126/237 (53%), Gaps = 9/237 (3%) Query: 110 IGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNP--DRVLHMLR 167 I ++ + + +A RPG EFEL TP ++I GVV+ V+ R A + D L ++ Sbjct: 2 IDARPIAADALAFRPGNVEFELLTPAQFSIYGVVVRGAVLRRYAQEVERCGLDERLPLV- 60 Query: 168 NQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPM 227 + V E L + Q L + +P D + A+ + Sbjct: 61 --PVVRVGEARLTRLCALLAQRLDD-ADAMSAAGEPLSDCARNDLQAEVLAALFDLCASP 117 Query: 228 VTAESISHQSYRR-LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPN 286 S+ H S RR +++ AR+YVL + S PV V +LC QLHVSRRTLQ F +LG+ P Sbjct: 118 AADASVEHSSRRRKIVAAARDYVLAHRSRPVGVPELCEQLHVSRRTLQYCFQDVLGMAPA 177 Query: 287 AWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 +L+ +RLN VRR+L + +V+DAA WGFWHL QFATDY+++F +PS TL Sbjct: 178 TYLRALRLNGVRRDLRG--RAAASVQDAAAAWGFWHLSQFATDYRRMFGARPSETLR 232 >UniRef50_A4JQI4 Transcriptional regulator, AraC family n=5 Tax=Burkholderia RepID=A4JQI4_BURVG Length = 321 Score = 130 bits (326), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 100/317 (31%), Positives = 149/317 (47%), Gaps = 14/317 (4%) Query: 31 NVH--QRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQS 88 N+H R +DV+ H+ I W Q YDQ+ PG + VFRE + Q Sbjct: 9 NLHAESRCFSDVFLHSQAIVNWSQHYDQISPGIATTTLRQAAGQRFHVFRERINQRVMQH 68 Query: 89 CLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDV 148 L F +P + + + + T GG EF P D +L + + Sbjct: 69 GLAPRGRLCFALPIANTAAPIVQGRTVARPSLLTLRGGEEFVAHLPCDTEVLAFTIDRTL 128 Query: 149 ITRQA-NFLHN-PDRVLHMLRNQSALEVKE-QHKAALWGFVQQALATFCENPENLHQPAV 205 A + L N P RVL Q L + +++ AL G + Sbjct: 129 TADHALDELANLPARVL----RQPVLPISPVRYRTALDGLERVLCQALDHGSLTARDAFD 184 Query: 206 RKVLGDNLLMAMGAMLEEAQPMVTA-ESISHQSYRRLLSRAREYVLENMSEPVTVLDLCN 264 +VL N++ + +++ + A S S QSY ++ R++E LE P TV+DLC+ Sbjct: 185 ERVLAHNVVGILLDLVQSDEADAGALPSASTQSY--IVRRSQEIALECDDVP-TVIDLCH 241 Query: 265 QLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLG 324 L +SRRTLQ +F ++G P A+L+ IRLNAVRR L++ ++M + DAA Q+GF H G Sbjct: 242 HLRISRRTLQYSFQNVVGTTPTAYLRSIRLNAVRRFLMT-TPETMRIGDAAAQFGFCHFG 300 Query: 325 QFATDYQQLFSEKPSLT 341 +F+ YQQ F E PS T Sbjct: 301 RFSAYYQQHFHELPSHT 317 >UniRef50_C6XCD3 Transcriptional regulator, AraC family n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCD3_METSD Length = 344 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 96/319 (30%), Positives = 146/319 (45%), Gaps = 25/319 (7%) Query: 32 VHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLV 91 + +QT D A + W Q Y QL G F G +E+ L D+ +F EYT L QS + Sbjct: 36 IQHQQTGDFEHQASLLKGWNQDYLQLSAGAFEGYVSELYLRDMHLFLEYTNQVLYQSGHL 95 Query: 92 WPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITR 151 + G+P R F GS C +A + G FE + + T++GV+ + + Sbjct: 96 GEDVIAIGVPLQRPHGMFCGSTCQPAA-VHLYSGNQGFEYISAQE-TLVGVLTIKREVLL 153 Query: 152 QANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPA----VR- 206 A +++++++ L V E L ++ PE A VR Sbjct: 154 AALCPDEQAQLMNVIKQARLLPVSESAWIKLCTYLSGTFERLATTPELADSTAFLESVRM 213 Query: 207 ---KVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLC 263 +V+ D LL P A + ++++ RE V + ++ +TV DLC Sbjct: 214 AGLEVIADCLL-----------PAAEAIHVPGAKSWKMITEVRELVSQPDTQALTVADLC 262 Query: 264 NQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHL 323 +L SRR+LQ F L I P A+L+ RLN VRR L + S V +AA WGFWH Sbjct: 263 QKLGTSRRSLQYHFEQALDISPIAFLRAERLNGVRRMLKTANS----VTEAATHWGFWHF 318 Query: 324 GQFATDYQQLFSEKPSLTL 342 G F+ +Y+++F E PS T Sbjct: 319 GHFSQEYKKMFGELPSTTF 337 >UniRef50_Q0K462 Transcriptional regulator, AraC-family n=1 Tax=Ralstonia eutropha H16 RepID=Q0K462_RALEH Length = 314 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 86/299 (28%), Positives = 146/299 (48%), Gaps = 4/299 (1%) Query: 42 EHALTITAWQQIYDQLHPGKFHGEFTEILLD-DIQVFREYTGLALRQSCLVWPNSFWFGI 100 +H L + + Y Q PG++ G ++ D D+ V+RE + + + F I Sbjct: 14 DHRLGLPELNKRYLQTGPGRYAGHLQQVRPDADLLVYRERLDVPILREGWTRKGLRMFAI 73 Query: 101 PATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPD 160 + + +G+A +A GG E+ + +P LG+VL++ + A++L Sbjct: 74 ALPVESRATFHGRAVGAA-VAHLAGGREYSVQSPGPSEHLGIVLADSTFSIHADYLGGVP 132 Query: 161 RVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAM 220 R+ + LE + L + L +N L PA R L D++L + + Sbjct: 133 RLAWT--GEPLLEAPAAARERLASRILCCLLGATKNVSALVCPAARMTLRDDVLEHLFCL 190 Query: 221 LEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAI 280 L +A+ I+ +Y ++ R+RE++ N PV VL+L L VSRRT+Q AF + Sbjct: 191 LIDAELPGRRRDITRLTYSDIVHRSREHLRANADRPVGVLELSGLLRVSRRTIQTAFMEV 250 Query: 281 LGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 G+ P +L+ IRL++VRR L + +TV AA +WGF H+ +FA +Y ++F PS Sbjct: 251 TGVTPQTYLRAIRLSSVRRLLRQTSADRLTVSQAAARWGFVHMSRFAAEYGRMFGCLPS 309 >UniRef50_Q1H3X2 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria RepID=Q1H3X2_METFK Length = 339 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 94/318 (29%), Positives = 152/318 (47%), Gaps = 10/318 (3%) Query: 34 QRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWP 93 +R T+DV E A + W Q Y QL G F G T + D +Q+F E A+ Q Sbjct: 22 ERSTSDVLEQAEALPFWSQDYTQLSKGAFSGSVTSVSCDGLQIFTETMNQAVDQIASAPV 81 Query: 94 NSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQA 153 +S+ G+P + G + + + T E T + I V+ + A Sbjct: 82 DSYVMGLPTLVDGESTWGLLPITTNSLITLEKNAELYFKTSNISEITAAVIPAQRLETYA 141 Query: 154 NFLHNPD--RVLHMLRNQSAL--EVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVL 209 + D +V+ L+ L ++ +Q +AL G +Q + +N+H + + Sbjct: 142 AEVEWIDLSKVMEGLKPVEMLHPDIAQQLLSALQGGIQYK----ADIADNIHAHQMWRNF 197 Query: 210 GDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVS 269 D+LL L + + + R L++R R+Y L N + P+T+ +LC L VS Sbjct: 198 EDDLLSTCLHTLLHVRGNIHPH-FDQRLPRYLVNRVRDYTLSNSALPLTIGELCKSLRVS 256 Query: 270 RRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATD 329 RRTL +AF +LGI P A+++ +RL+ VR E+ + +++ A +WGFWHL F+ Sbjct: 257 RRTLNHAFIRVLGITPVAYIRNLRLHRVRFEMQQSPHEVISIAHLATKWGFWHLSLFSRY 316 Query: 330 YQQLFSEKPSLTLHQRMR 347 Y++LF E P TL QR R Sbjct: 317 YRELFGECPIDTL-QRAR 333 >UniRef50_A5EM40 Transcriptional regulator, AraC family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EM40_BRASB Length = 348 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 93/336 (27%), Positives = 145/336 (43%), Gaps = 12/336 (3%) Query: 18 PENLKLTPKVE-----VDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLD 72 PE L + P+ + RQ+ D + ++ W+ QL PG+ E + LD Sbjct: 8 PEGLSVPPESQPLQTFAPRFVLRQSEDALDQVKSLGGWKIRLQQLSPGRLKAEVAGLHLD 67 Query: 73 DIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELS 132 +IQ RE T AL + + F P G++ +G + GG + Sbjct: 68 NIQFIRERTTQALLKEVETGDDQIVFSQPLQASGPGYVNGHMIGYPDPCLLGGGILPSIR 127 Query: 133 TPDDYTILGVVLSEDVITRQANFLHNPDRVLHML--RNQSALEVKEQHKAALWGFVQQAL 190 TP + + + + + R L + ++ R + L+++ + + Q Sbjct: 128 TPQYLDVASLAVDKAHLLRWLTELGESELADTLISKRQLACLQLEPTSLSIVKDVSLQLC 187 Query: 191 ATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVL 250 L R+ L D+LL A + + S RRL RARE VL Sbjct: 188 GDSGITERVLDFEQCRRTLEDDLLHAF---MRSLRVSRRRSLTSLTLQRRLADRARELVL 244 Query: 251 ENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSM- 309 T+ DLC QL VSRR+LQ+ F G+ P +L+ +RLNAVRREL + S+ Sbjct: 245 ACPDAAPTISDLCRQLGVSRRSLQDGFQGAFGLAPTQFLRVVRLNAVRRELRALAGNSVQ 304 Query: 310 -TVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 ++ D A +WGFWH +F + Y+ LF E PS T + Sbjct: 305 PSIGDIAARWGFWHWSRFTSYYRGLFGELPSETFRR 340 >UniRef50_C3KB89 Putative AraC family regulatory protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KB89_PSEFS Length = 313 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 90/310 (29%), Positives = 141/310 (45%), Gaps = 10/310 (3%) Query: 35 RQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPN 94 R D HA +I W+Q+YDQL G ++ + Q+F+E + Q Sbjct: 6 RTFNDPQLHAGSIQGWRQVYDQLGRGCLTSGLRQLSAERFQIFQEVLDKRVVQRGFAPKG 65 Query: 95 SFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQAN 154 + + G + Q +G+ + G EF L P+ + + + A Sbjct: 66 RLC--VAMSLGSAPVVQGQQVGAHNVVLLRDGEEFVLHAPEGTHFFALNVDTVRFAKLAA 123 Query: 155 FLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQP---AVRKVLGD 211 F + D+ L + +S + V + AL ++Q + + P K+L D Sbjct: 124 FELSSDQ-LKRVTTRSQICVDD----ALLLRIRQRIYPLFRHLLQQTDPISACAEKMLED 178 Query: 212 NLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRR 271 LL A + A V + L+ R +E + + P+++LDLC L VSRR Sbjct: 179 ELLGAFLDLFSNATDEVRCRRGNFAVSAYLVKRCQELIDASGDTPLSILDLCEHLRVSRR 238 Query: 272 TLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQ 331 TLQN+F A+ G+ P +L+ +RLNAVRR+LI+ S V D A+ GF+HL FA Y+ Sbjct: 239 TLQNSFQAVTGLRPVEYLRNLRLNAVRRQLIATPGGSQNVGDVAVAMGFFHLSHFAAHYR 298 Query: 332 QLFSEKPSLT 341 +LF E PS T Sbjct: 299 ELFGESPSET 308 >UniRef50_C6WX32 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria RepID=C6WX32_METML Length = 339 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 87/327 (26%), Positives = 148/327 (45%), Gaps = 5/327 (1%) Query: 19 ENLKLTPKVEVDNVH--QRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQV 76 E L ++P +H +R+TTDV E A + W Q Y QL G F G + + +QV Sbjct: 6 EFLGISPTGGSPKIHLVERKTTDVLEQADALPFWSQDYTQLSKGTFSGGLSSVTHHGVQV 65 Query: 77 FREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDD 136 FRE A+ Q +++ G+P G + + T E T + Sbjct: 66 FRETMNRAVDQIAFAPADAYVIGLPTIIEGDASWGLMPVKPNAMITLDKNAELVFRTSNL 125 Query: 137 YTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCEN 196 I V+S + A + D M + + A L + + + Sbjct: 126 SEITAAVISAQRLEEYAAQVEWIDLRKAMESVKPVERISPDVTARLQASLTDGMHYVSKF 185 Query: 197 PENLHQPAVRKVLGDNLL-MAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSE 255 + + ++ ++L+ + A+L+ + S H+ +R +++R R+ L + Sbjct: 186 RDTEDAEQIWRLFENDLMATCLQALLQASNS--PNHSHDHRIHRYIVNRVRDLTLSSSGY 243 Query: 256 PVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAA 315 P+T+ +LC L +SRRTL +AF +LGI P A+++ +RL+ +R EL S Q + A Sbjct: 244 PLTIEELCISLRISRRTLNHAFIRVLGITPVAYMRNVRLHRIRAELQSAPHQVRYIASVA 303 Query: 316 MQWGFWHLGQFATDYQQLFSEKPSLTL 342 +WGFWH+ F+ Y++LF E P TL Sbjct: 304 AKWGFWHMSLFSRYYRELFGETPIETL 330 >UniRef50_D1T8Q5 AraC family transcriptional regulator n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T8Q5_9BURK Length = 312 Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 92/310 (29%), Positives = 143/310 (46%), Gaps = 19/310 (6%) Query: 38 TDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFW 97 TD EHA + W+Q Y QL G F G +I +D +F E + Q + Sbjct: 9 TDAGEHAAMLPGWEQQYFQLDCGPFQGRLQQIGVDGTHLFYESVNRRVVQQGSTPSDMLV 68 Query: 98 FGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLS-------EDVIT 150 FGI + + + + EF L P + +L V + ++ Sbjct: 69 FGIVLDANSPVTFADRSVPADSMICARASREFFLHFPGETALLAVGVKLPFLAGHPELAA 128 Query: 151 RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFV-QQALATFCENPENLHQPAVRKVL 209 R + L N V+ + A + A+W +V +ALA P L Q R+V Sbjct: 129 RLESRLSNKTCVIPLAPGARAQFI------AMWRYVTDEALALNACAPSELAQ---RRVS 179 Query: 210 GDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVS 269 L M + A++++ P + I+ S +++RA + +L EPVTV +LC L +S Sbjct: 180 AQILDM-LDALVDDGVPDEKTD-ITWMSQSDVVARAHDMILARPMEPVTVQELCESLRIS 237 Query: 270 RRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATD 329 RRT+Q +F + G P +++ IRLN VR+ L S +TV+ AA +WGF+H G F D Sbjct: 238 RRTVQTSFRLVTGKSPVEYMRAIRLNHVRQLLRKSSSGELTVRAAAQRWGFFHSGHFTQD 297 Query: 330 YQQLFSEKPS 339 Y++LF PS Sbjct: 298 YRELFEAMPS 307 >UniRef50_C3KBA5 AraC family regulatory protein n=2 Tax=Proteobacteria RepID=C3KBA5_PSEFS Length = 322 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 22/313 (7%) Query: 39 DVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWF 98 DV+ HA TI W Q Y QL G ++ +F E + Q+ + F Sbjct: 11 DVHVHAATIQQWNQDYSQLTAGCAESSLMQLTTTGCHLFLEQINQRVVQNGVAPRGKMCF 70 Query: 99 GIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHN 158 +P + + + + + GG EF P +L + ++ + + Sbjct: 71 AVPINVPGSIRMQGREVDDSSLFFLHGGEEFMFHMPMGMELLSITFERELFEQALEQTAS 130 Query: 159 PDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENP--ENLHQPAVRKVLGDNLLMA 216 + +LR Q + V Q A Q+ LA F + E+L R+V + Sbjct: 131 AKELNRLLR-QPVIRVSPQRFARAR---QRLLALFSQALMYEDLDSTPDREVALEQ---- 182 Query: 217 MGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLEN--------MSEPVTVLDLCNQLHV 268 AML E ++T + ++R S R +++E M +V++LC +L V Sbjct: 183 --AMLGELLQLMTDPACD--KHQRSPSSTRSFIVEKCHRLTTAEMINVPSVIELCERLQV 238 Query: 269 SRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFAT 328 SRRTLQN+F ++ P +L+ +RLN VRR L+S + +++ DAA QWGF+HL FA Sbjct: 239 SRRTLQNSFRSVAETTPLNYLRSVRLNGVRRLLMSTRACELSIGDAAAQWGFYHLSHFAA 298 Query: 329 DYQQLFSEKPSLT 341 +YQ+LF+E PS T Sbjct: 299 EYQELFAELPSHT 311 >UniRef50_Q88I52 Transcriptional regulator, AraC family n=8 Tax=Pseudomonas RepID=Q88I52_PSEPK Length = 349 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 87/315 (27%), Positives = 136/315 (43%), Gaps = 27/315 (8%) Query: 31 NVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCL 90 V TTDV E WQQ Y Q+ PG F GE + LD ++V+ E + Q Sbjct: 58 KVQAFHTTDVTEQVRATPGWQQQYRQMSPGYFSGELRCLGLDGVEVYEERLNTRVEQFFR 117 Query: 91 VWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVIT 150 S F + + Q S I TP++Y + VV + + Sbjct: 118 APSGSLAFCFDRSENSLYLLNEQ---SRNIWI----------TPENYQEVAVVFDQAFLA 164 Query: 151 RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLG 210 R +P R+ + + + A ++ L E L A+ + L Sbjct: 165 RHG---LDPQRLEGLF----MVPLGSGQNALFGSWLSATLTRLGEEGCPLQGQALAEQLL 217 Query: 211 DNLLMAMGAMLEEAQPMVTAESISHQSYRR-LLSRAREYVLENMSEPVTVLDLCNQLHVS 269 ++ L +L+ A + ++ + R ++ R E+ + E + +L+L + VS Sbjct: 218 EDCLF----ILDNASQRLQGVALGRRDEERAIMHRVSEWAADCPEETLNLLELADVAGVS 273 Query: 270 RRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATD 329 R LQ AF A G+ P WL+ RLN RR+L+ +TV + AM+W FWHLG+F+ Sbjct: 274 LRQLQQAFKAFTGMPPAHWLRLRRLNGARRDLLR--GGGVTVAEVAMRWSFWHLGRFSES 331 Query: 330 YQQLFSEKPSLTLHQ 344 Y+QLF E PS TL + Sbjct: 332 YRQLFKEFPSETLKR 346 >UniRef50_Q46TV6 Transcriptional regulator, AraC family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46TV6_RALEJ Length = 330 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 81/304 (26%), Positives = 137/304 (45%), Gaps = 14/304 (4%) Query: 47 ITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGE 106 + WQQ Y QL PG F E +++ D+ VFRE T +L + +P + + Sbjct: 36 LDGWQQRYQQLTPGVFRAEVSQVTYGDVHVFRELTSQSLLEEGEAARGYVSLALPDVQCQ 95 Query: 107 QGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHML 166 G+ + + G + TP + G+ + + R L + Sbjct: 96 GGWFSGYAMDGQTLLCAGNGRALAMRTPLQLDLAGLTVPMPALQRAMALAGG--ETLRLE 153 Query: 167 RNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMA-----MGAML 221 R +V + + LAT + E V + D LL+A +G + Sbjct: 154 RMAPVRQVTKGASREFRAVLLSVLATAAIDAEVFSNRFVESAMRDALLLAAATALVGEGI 213 Query: 222 EEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAIL 281 + +P+ T + RRL++ A + + +P ++L LC +L VSRRTLQ +F+ + Sbjct: 214 DGNEPLPTIPA-----RRRLVADAYQMIRSAPDQPWSILSLCERLGVSRRTLQYSFNEVT 268 Query: 282 GIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 G+ P +++ +R+N VR+ L + ++S V AA +GF HL +FA Y+ F E PS T Sbjct: 269 GLSPLDFVRAVRMNGVRQALRTGAAES--VGGAAASFGFQHLPRFAAQYRAFFGELPSAT 326 Query: 342 LHQR 345 L +R Sbjct: 327 LARR 330 >UniRef50_B1YYW7 Transcriptional regulator, AraC family n=5 Tax=Burkholderia cepacia complex RepID=B1YYW7_BURA4 Length = 334 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 85/322 (26%), Positives = 139/322 (43%), Gaps = 40/322 (12%) Query: 38 TDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFW 97 TDV E A W Y Q+ G+FHG + + L I++ E + Q V + Sbjct: 26 TDVEEQARIFDGWHLNYTQISGGRFHGSSSIVSLGGIRLLVEDLDKVILQQGAVPSDRVA 85 Query: 98 FGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVIT------- 150 +P + + G + FE +PD + ++ V ++ D ++ Sbjct: 86 VAVPLELEGHARMCGEKSGRDSLHVFSSQPVFEFYSPDRHVLVNVEIAPDKLSTPALRTF 145 Query: 151 ----RQANF-----LHNP--DRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPEN 199 R F + P DR+ H+LR+ A K ++ Sbjct: 146 AASLRARTFAPLIPMTAPVADRLRHLLRHAMAAAAKSTPA------------------DD 187 Query: 200 LHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTV 259 + ++L +L A+ + +P A + Y L++ A+ + + + P+++ Sbjct: 188 VTTQDRIELLERTVLYAISEAMTMPEPHADALATRSTKYWSLVNAAQARLQDASTCPLSI 247 Query: 260 LDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWG 319 +LC QL +SRRT+Q AF+ L + P A+L+ +RLN VRREL V AA +WG Sbjct: 248 AELCVQLGISRRTVQYAFNDTLNLNPIAYLRAVRLNHVRREL----RLGGPVTSAATKWG 303 Query: 320 FWHLGQFATDYQQLFSEKPSLT 341 FWHL FA DY+ +F E PS T Sbjct: 304 FWHLSSFAQDYRAMFGELPSAT 325 >UniRef50_B7KJD4 Transcriptional regulator, AraC family n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KJD4_CYAP7 Length = 319 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 76/304 (25%), Positives = 137/304 (45%), Gaps = 2/304 (0%) Query: 39 DVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWF 98 DV E W + Y QL G L IQ + + L+LR P + Sbjct: 13 DVDELTEAARHWTEEYLQLGTGSLKTLIDIAQLGGIQFVSQLSNLSLRACGQTPPKTISI 72 Query: 99 GIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHN 158 GIP + + + ++A E L+ + L + + ++ + ++A + Sbjct: 73 GIPVNCEDHLVWYGRIIPPGQVALAYSCVENYLTFLGETKFLIISVDQETLLKEAEAMGR 132 Query: 159 PDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMG 218 + + + + AA+ ++Q +PE + ++ ++ + + Sbjct: 133 TEIISFLEGKYHLIYPDPVALAAIKNYLQDLWQLVKISPEQAIEIRMQNLIHRDFIPLFL 192 Query: 219 AMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFH 278 + + S S + L+ +A E++ +N+ +P+T+ DL L VS RTL+ +F Sbjct: 193 NLFPCDKGQNPKVSFSKRYI--LVRKAEEFIKDNLHDPLTLQDLYEHLQVSERTLRYSFQ 250 Query: 279 AILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKP 338 LG+ P +LK+ RLN VRREL + + + + A +WGFWH+GQF+ DY++LF E P Sbjct: 251 DCLGVSPMTYLKKQRLNGVRRELKASYGTPVKINQIAARWGFWHMGQFSQDYKKLFGEFP 310 Query: 339 SLTL 342 S TL Sbjct: 311 SQTL 314 >UniRef50_C9PH24 Ethanolamine operon regulatory protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PH24_VIBFU Length = 277 Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 86/280 (30%), Positives = 127/280 (45%), Gaps = 49/280 (17%) Query: 93 PNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQ 152 PN+ W G G Q + ++ RP FEL+TP D+ I G+V+ + Sbjct: 3 PNAVWIGFSMNSQRPKVNGLQA-ETHQLMIRPAQESFELATPQDFHIFGIVIDRE----- 56 Query: 153 ANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCEN--PE-------NLHQP 203 +L N +EQ W Q AT EN P+ +L + Sbjct: 57 ------------LLLNGMQFGSQEQ-----WENTQWETATLVENNVPQHGCWSLVDLIRD 99 Query: 204 AV--RKVLGDNLL------MAMGAMLEEA--------QPMVTAESISHQSYRRLLSRARE 247 A+ + +LG LL + AML A Q E S+ + R+ L R + Sbjct: 100 ALSPQSILGQKLLEESVAQAHLHAMLRTAVMDRLSAFQISTEREPRSYHTRRQALRRLYQ 159 Query: 248 YVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQ 307 Y+ +N P+++ D+C VS+RTLQN F LG+ P +L+ RLNAVRR L+ SQ Sbjct: 160 YIEQNGDYPLSISDMCAIACVSQRTLQNCFEQELGVSPATFLRECRLNAVRRVLLDQ-SQ 218 Query: 308 SMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 + D A+ +GF+H+G F Y+ LF E PS T + +R Sbjct: 219 QRAICDVALDFGFYHIGTFNHYYKLLFGETPSQTRDRALR 258 >UniRef50_Q488C6 Transcriptional regulator, AraC family n=2 Tax=Colwellia psychrerythraea 34H RepID=Q488C6_COLP3 Length = 330 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 88/326 (26%), Positives = 146/326 (44%), Gaps = 14/326 (4%) Query: 25 PKVEVDN-VHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGL 83 P +DN V T+DV E + + Y QL G+ +G + E L D+Q+FRE Sbjct: 8 PSTTIDNNVRGISTSDVDELSQFQLNKNRRYTQLQAGQLNGAYLEANLGDVQIFRE---- 63 Query: 84 ALRQSCLV--WPNSFWFGIPA-TRGEQGFIGSQCLGSAEIAT--RPGGTEFELSTPDDYT 138 +L L+ P S + A T F C E T + G ++ S Sbjct: 64 SLNAGALIEAAPASSFLPFAAITSNADNF--KYCGKQREKNTVLQATGGFWDASFQHSLN 121 Query: 139 ILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPE 198 + +R L + +Q+ L K G + L PE Sbjct: 122 FVVAAFDRKAFSRSIELLTGEEVPQAWFVSQACLTEPHALKTYACG-LDNILTIIKSRPE 180 Query: 199 NLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVT 258 L + V+++L D++L + +L + P + + +S + + + +Y+ + T Sbjct: 181 ILKKDNVQRMLSDSILRLILKVLSKTTP-INVQQVSPSNRAQGVRMVIDYLHHYADQVPT 239 Query: 259 VLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQW 318 + +LCN +S R LQ F+ LGI P +L+ +RLN V+R+L+ + + D A+ W Sbjct: 240 IPELCNIAKLSERNLQYGFNEYLGITPIRYLRLVRLNGVKRDLLLSHPKKDRIVDIALNW 299 Query: 319 GFWHLGQFATDYQQLFSEKPSLTLHQ 344 GF LG+FA +Y+QLF E PS+TL++ Sbjct: 300 GFIELGRFAGEYRQLFQELPSVTLNK 325 >UniRef50_A2SJ66 Transcriptional regulator, AraC family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SJ66_METPP Length = 318 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 84/325 (25%), Positives = 137/325 (42%), Gaps = 24/325 (7%) Query: 36 QTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNS 95 Q+ DV + A ++ WQQ Y+QL G+F G ++++ V RE T LR+ + Sbjct: 5 QSADVDDQAQALSGWQQRYEQLGCGRFRGSARQVVMAGGTVLRESTNRQLREQIRPPSDC 64 Query: 96 FWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANF 155 IP + + L + G E+EL + +L + V R+ Sbjct: 65 LVLAIPLSVAPGSVFAGRPLDGDALMVISGHEEYELVAAGELDLLAL----SVDRRRLGG 120 Query: 156 LHNPDRVLHMLRNQSALEVKEQHKAALW----GFVQQALATFCENPENLHQPAVRKV--- 208 + P+ + + R + Q + AL G V+ L C AV + Sbjct: 121 MLAPEEIEWLAR------AERQRRWALAPDTAGAVRSQLLAVCSAAGRCAPGAVIDIENE 174 Query: 209 ---LGDNLLMAMGAMLEEAQPMVTAESISHQSYRRL--LSRAREYVLENMSEPVTVLDLC 263 +G L + + + A I ++ RL + RA E++ N+ E + + ++C Sbjct: 175 PALIGATLAHTVALAMSDGGADRGAVGIPRRADSRLRVVKRAIEFIRANLQEDIGIPEIC 234 Query: 264 NQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHL 323 SRR+LQ F L P A+L+ +RLN RR L P Q +T+ AM GF Sbjct: 235 AAACASRRSLQYCFEEFLHTTPQAYLRALRLNEARRRLKQPGDQPITLLACAM--GFSSA 292 Query: 324 GQFATDYQQLFSEKPSLTLHQRMRE 348 F Y+ +F+E PS T +R R+ Sbjct: 293 SHFTRHYKLMFNELPSQTQRRRTRD 317 >UniRef50_D1U469 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U469_9DELT Length = 320 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 45/106 (42%), Positives = 70/106 (66%), Gaps = 2/106 (1%) Query: 239 RRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVR 298 RR++ ++ Y+ +N++ PV + D+C ++ VS RTL AF LG+ P A++ RLN VR Sbjct: 203 RRIVRQSLGYINDNLASPVKLGDICRKVGVSERTLIYAFKQHLGLTPKAYVNICRLNMVR 262 Query: 299 RELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 RE+ + ++ DAA +WGFWH+GQF+ DY++ F E PS TL + Sbjct: 263 REM--ECGRVASITDAATRWGFWHMGQFSADYKRFFGELPSQTLSR 306 >UniRef50_B4AUP2 Transcriptional regulator, AraC family n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AUP2_9CHRO Length = 382 Score = 90.5 bits (223), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 59/168 (35%), Positives = 84/168 (50%), Gaps = 16/168 (9%) Query: 183 WGFVQQALATFCENPENL----HQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSY 238 +G + Q LA E PE + Q +R+ LL +GA+ Q + + + Sbjct: 216 YGQISQLLA---EKPELIGKAPFQALIRQDFLPLLLDTLGAISRRNQKV-------KKPF 265 Query: 239 RR--LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNA 296 RR L+ +A E L +P+T+ LCN+L S L F I G+ P A++K RLN Sbjct: 266 RRYSLVKKALEIALSFPEQPLTLEQLCNKLETSSSALAYGFQDIFGLSPIAYIKIQRLNG 325 Query: 297 VRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 VRR L ++ TV A QWGFW FA DY+++F E PS TL + Sbjct: 326 VRRLLKRADPKTTTVMQVAQQWGFWSFSHFARDYKKMFGELPSQTLQK 373 >UniRef50_UPI00006A2B14 UPI00006A2B14 related cluster n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI00006A2B14 Length = 303 Score = 90.5 bits (223), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 84/313 (26%), Positives = 131/313 (41%), Gaps = 51/313 (16%) Query: 39 DVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWF 98 D + HA + W+ Y Q+ G ++ FRE + Q + Sbjct: 30 DAHLHASALQGWKNTYSQISAGALETSLMQLTSARSHAFRERISQRVVQHGETPRDKVCL 89 Query: 99 GIP-ATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLH 157 IP RG G + A+ R + STP I G +L + VI L Sbjct: 90 AIPVGMRGVASVQGRE----ADTIQREFFEDMLESTPHAQEI-GALLRQPVIKVLPKRLA 144 Query: 158 NPDRVLHMLRNQSAL--------EVKEQHKAALWGFVQQALATFCENPE-NLHQPAVRKV 208 R L + ++ L E + + + A+ G + + L+ +PE + HQ Sbjct: 145 ECRRRLLAMFTEAMLNDDLGETPERENELEQAMLGELMRLLS----DPECDWHQ------ 194 Query: 209 LGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHV 268 +P T S ++ + + + N +V++LC +L V Sbjct: 195 ----------------RPPSTTHSF-------IVEKCHQLTMLNAFNAPSVIELCQRLQV 231 Query: 269 SRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFAT 328 SRRT+QN+F + P +L+ +RLN VRREL+ +++V DAA WGF+HL FA Sbjct: 232 SRRTIQNSFRNVTETTPLNYLRCVRLNGVRRELM---FTTLSVGDAAANWGFFHLSHFAA 288 Query: 329 DYQQLFSEKPSLT 341 DYQ+LF E PS T Sbjct: 289 DYQELFGELPSQT 301 >UniRef50_A3YU12 Transcriptional regulator, AraC family protein n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YU12_9SYNE Length = 318 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 65/220 (29%), Positives = 110/220 (50%), Gaps = 3/220 (1%) Query: 127 TEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFV 186 E LSTP+ + V+L+ +TR ++ + D R + L + + L ++ Sbjct: 79 AEVHLSTPEQMDLAVVMLTPSTLTRWSSGQGDRDLEAAPFRC-NCLPIDVDSRTQLQRWL 137 Query: 187 QQALATFCENPE-NLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRA 245 + L E P + P+ + G LL + LE+ + + S + +++ + Sbjct: 138 LKLLPLQAETPSVPVVSPSAPEAAGGGLLPLLVDALEQGL-RLRGVTDSPPARIQMVKQL 196 Query: 246 REYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPW 305 +++V E+ EP+++ LC Q +V RR+L F LG+GP A+ K RL+ VRR L+ Sbjct: 197 QQWVEEHPLEPISLDGLCRQAYVGRRSLILGFKEHLGMGPMAYFKLQRLHGVRRGLLEAA 256 Query: 306 SQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 ++T+ A WGF + G FA DY++LF E PS TL R Sbjct: 257 PGAVTISGLAASWGFLNPGHFARDYRRLFGELPSATLSGR 296 >UniRef50_Q3LUX0 Transcriptional activator (Fragment) n=2 Tax=Pseudomonas fluorescens RepID=Q3LUX0_PSEFL Length = 330 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 24/228 (10%) Query: 133 TPDDYTILGVVLSED------VITRQA------NFLHNPDRVLHMLRNQSALEVKEQHKA 180 +P+++ +L + S D VITR A L P + LR +S ++ + A Sbjct: 107 SPNEHQVLAI--SGDCRKLQVVITRAAMSESLEGLLQRP--IDAPLRFESVMDAVDGAPA 162 Query: 181 ALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRR 240 + W + +A + E Q A + L +L+ G +L AQP +E + + Sbjct: 163 SWWRMARYFIAELERSSELYEQAAFTRDLESSLIK--GLIL--AQPNNYSEELRDVLGVK 218 Query: 241 L---LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAV 297 L L RAR+++ +N E + + DL VSR L +AF + P A+LK+ RL AV Sbjct: 219 LPHYLIRARQFIHDNAREALHLEDLEAAAGVSRFKLFDAFRKYFALSPMAYLKKHRLGAV 278 Query: 298 RRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 R+E++ S T+ + A+ WGF HLG+F+ +Y++LF E PS TL ++ Sbjct: 279 RQEILEQGS-IRTISEIALGWGFTHLGRFSAEYRKLFDESPSQTLQRK 325 >UniRef50_Q4KIN6 Transcriptional regulator, AraC family n=15 Tax=Proteobacteria RepID=Q4KIN6_PSEF5 Length = 337 Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 11/215 (5%) Query: 131 LSTPDDYTILGVVLSEDVITRQ-ANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQA 189 L+ D L VV+S ++ L P VL LR + ++ AA W Q Sbjct: 118 LAISGDCRKLQVVISRPAMSEALEGLLQRP--VLEPLRFEPGMDALHGAAAAWWRMAQHF 175 Query: 190 LATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRL---LSRAR 246 + + E Q A + + +L+ G +L AQP + + +L L RAR Sbjct: 176 IGELAQGNELYEQLAFTREIESSLIK--GLIL--AQPNNYSSELRAMLGVKLPHYLVRAR 231 Query: 247 EYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWS 306 +++ E+ E V + DL VSR L AF + P A+LKR RLN VR+E++ S Sbjct: 232 QHLHEHARETVHLEDLEAAAGVSRFKLFEAFRKYFALSPMAYLKRHRLNGVRQEILEHGS 291 Query: 307 QSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 + + + A+ WGF HLG+F+ +Y++LF E PS+T Sbjct: 292 -ARNISEIALGWGFTHLGRFSAEYRKLFDETPSVT 325 >UniRef50_Q4C4B2 Helix-turn-helix, AraC type n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C4B2_CROWT Length = 241 Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 49/158 (31%), Positives = 84/158 (53%), Gaps = 4/158 (2%) Query: 185 FVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYR-RLLS 243 +++Q LA NP L QP + +++ D+ + ++ + + ++S S R +L+ Sbjct: 84 YLKQILALAIYNPTWLQQPHIEQLISDDFV---PLLISQIPIKLNSKSFVKPSRRAKLII 140 Query: 244 RAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELIS 303 +A + +L ++ +P+T+ L L S L F + G+ P ++K RLNAVR+ L Sbjct: 141 QAEKQILNSLEKPLTLKQLAENLGSSSSALSYGFKDLFGMSPMRYIKVRRLNAVRQHLKV 200 Query: 304 PWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 + +T+ A Q+GFW LG F DYQ +F E PS T Sbjct: 201 RDRKRITIARVANQFGFWSLGHFIRDYQAMFGELPSQT 238 >UniRef50_A5VD66 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VD66_SPHWW Length = 327 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 1/105 (0%) Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 R + RA +Y+ + E + + DL VS RTL +F G+ P +L+R RL+ VR Sbjct: 220 RAVKRAEDYIAAHAGEDIGIADLVAASEVSNRTLFESFRRFRGVTPMQYLRRYRLDRVRE 279 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 EL+ P S ++V D AM+W F LG+F++ Y +F EKPS TL + Sbjct: 280 ELLDPGSD-VSVTDVAMRWNFDQLGRFSSYYASVFGEKPSQTLRR 323 >UniRef50_C7N068 DNA-binding domain-containing protein, AraC-type n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7N068_SACVD Length = 338 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 44/103 (42%), Positives = 62/103 (60%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 L RA +Y+ E+ E T+ DL VS RTLQ F LG P +L+ +RL A R EL Sbjct: 232 LKRALDYIHEHAHELPTLTDLTAAAGVSARTLQLQFLRNLGCTPLQYLRDVRLRAARAEL 291 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 + P S +TV D A WGF++LG+F++ Y+ ++ E PS TL + Sbjct: 292 LHPRSADVTVTDVATSWGFYNLGRFSSLYRSVYGETPSETLRR 334 >UniRef50_Q1QJ52 Transcriptional regulator, AraC family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QJ52_NITHX Length = 367 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 44/109 (40%), Positives = 57/109 (52%) Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 RL+ +Y+ + PV V +LC VSRR L AFH + G+GP +L+ RL A+ Sbjct: 210 RLVHNVEDYLAAADARPVHVSELCAAFRVSRRGLHRAFHDVFGVGPVTFLRHKRLCAIHS 269 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMRE 348 LI TV A+Q GF LG+F+ Y LF E PS TL R E Sbjct: 270 ALIDSSPGDTTVAKVALQQGFVELGRFSHYYHALFGEYPSETLELRGAE 318 >UniRef50_B9Z058 Transcriptional regulator, AraC family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z058_9NEIS Length = 245 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 44/136 (32%), Positives = 76/136 (55%), Gaps = 4/136 (2%) Query: 206 RKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQ 265 + +L NLL + + + + S L+ R ++++ S +++ +LC + Sbjct: 97 QSLLERNLLYGLMEAVSDFPELAADRSPKSSKNWELVKRVQQFLQNPDSCVLSIAELCIE 156 Query: 266 LHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQ 325 L++SRRT+Q AF +G P +L+ +RLN VR +L+ + ++V +AA++WGF HL Sbjct: 157 LNLSRRTIQYAFENAIGTNPAKYLRAVRLNHVRHDLM----RGLSVTEAAIRWGFLHLSA 212 Query: 326 FATDYQQLFSEKPSLT 341 FA DY+ F E PS T Sbjct: 213 FAHDYRVFFGELPSTT 228 >UniRef50_D1T5H4 AraC family transcriptional regulator n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5H4_9BURK Length = 328 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 41/102 (40%), Positives = 56/102 (54%) Query: 241 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE 300 + RA ++ EN +P+ V D+ + VS +L F P +LK +RL VR + Sbjct: 225 FVRRAEAFIEENAHKPIAVSDIAEHVGVSTSSLYAGFRKYRNSSPMIFLKEVRLQRVREQ 284 Query: 301 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 L S + +TV A QWGF HLG FATDY++ F E PS TL Sbjct: 285 LRSCNAGQVTVTSVAHQWGFAHLGHFATDYKRRFGESPSETL 326 >UniRef50_B3Q2C8 Putative transcriptional regulator protein, AraC family n=9 Tax=Rhizobium RepID=B3Q2C8_RHIE6 Length = 344 Score = 80.5 bits (197), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 38/104 (36%), Positives = 67/104 (64%), Gaps = 1/104 (0%) Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 R + RA E++ E+M++P+++ D+ VS RTLQ+ F P L+ +R+ A R+ Sbjct: 221 RHVKRAMEFMEEHMAQPISLNDIAAAAKVSVRTLQHGFRQFRNTSPTMHLRDLRMCAARQ 280 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 EL+ ++ ++V + A++WGF HLG+FA +Y++ + E PS T+H Sbjct: 281 ELLQNGAK-ISVSEIALKWGFTHLGRFAAEYKRRYGELPSKTVH 323 >UniRef50_B9JL66 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JL66_AGRRK Length = 328 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/151 (35%), Positives = 76/151 (50%), Gaps = 6/151 (3%) Query: 194 CENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQ---SYRRLLSRAREYVL 250 C N E +P+ V + LL AM L E P + ++ + + L RA EY+ Sbjct: 172 CLNVEETDRPSSAFV--ERLLQAMMIALLETVPNNYSARLTKPISPAIPKRLKRAIEYMH 229 Query: 251 ENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMT 310 N+S P+ V D+ + S R LQ AF P +L+ IRL+ R+ L P + S++ Sbjct: 230 SNISSPMGVADIAREAGTSVRALQAAFQQFKDTTPLNYLRTIRLDGARKTLTDP-AISLS 288 Query: 311 VKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 V + A WGF H+G+FA Y Q F E PS T Sbjct: 289 VAEVARNWGFSHMGRFAALYHQSFGEMPSST 319 >UniRef50_A9BUW9 Transcriptional regulator, AraC family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BUW9_DELAS Length = 392 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 8/125 (6%) Query: 230 AESISHQSYRRLLSR----AREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGP 285 + +++ S R LL R A+EY+ + +P+++ D+C + S RTLQ AF G+GP Sbjct: 266 SRALAGDSRRSLLPRGVRKAQEYMQAHADQPLSLADVCREAGCSARTLQAAFRQHAGMGP 325 Query: 286 NAWLKRIRLNAVRREL----ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 +L+++RL+ VR EL + V+D A ++GF HLG FA Y+ F E PS T Sbjct: 326 MDFLRQLRLDRVRAELQAAKGPGAAAGSGVRDVAQKYGFLHLGHFAAQYRSRFGELPSET 385 Query: 342 LHQRM 346 +R+ Sbjct: 386 ASRRV 390 >UniRef50_Q0K9L2 Transcriptional regulator, AraC-family n=2 Tax=Cupriavidus RepID=Q0K9L2_RALEH Length = 318 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 4/164 (2%) Query: 180 AALWGFVQQALATFCENPENLHQPAVRKVLGDNLL-MAMGAMLEEAQPMVTAESISHQSY 238 AL Q+ L P LH PA + LL +A +L A + ++ HQ++ Sbjct: 147 GALLALTQRLLFIDDRQPAQLHHPAGEQTARSELLRLAFNTLLPLAAR--STDTARHQNH 204 Query: 239 RRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVR 298 RR+LS+A + + P+ + DLC S RT++N F+ +GI P+ +L RL+ R Sbjct: 205 RRILSQAMDLLAAARHTPILLEDLCAATSASERTIRNVFNRYVGISPHRYLVLHRLHHAR 264 Query: 299 RELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 + L + TV M++G W +G+FA Y++LF PS TL Sbjct: 265 QALKHAKAGE-TVTSICMRFGVWDIGRFAMQYRRLFGVLPSQTL 307 >UniRef50_UPI00016A2E59 transcriptional regulator, AraC family protein n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A2E59 Length = 337 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 74/134 (55%), Gaps = 8/134 (5%) Query: 213 LLMAM-GAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRR 271 LLM++ G L +A P I+ RR ++ ++ E+ P+T+ D+ H S R Sbjct: 211 LLMSLVGEQLTDALP--AEGGIASACVRRAVA----FIEEHAERPLTLTDIAAASHCSVR 264 Query: 272 TLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQ 331 TL AF +G LK +RL VR L P ++ ++ + A +WGF HLGQFATDY+ Sbjct: 265 TLHRAFQQWRDVGVMRHLKDVRLRRVRMALQDP-DETASITEIATRWGFAHLGQFATDYR 323 Query: 332 QLFSEKPSLTLHQR 345 + F+E+PS T QR Sbjct: 324 KAFNERPSDTRAQR 337 >UniRef50_A3YW71 Transcriptional regulator, AraC family protein n=3 Tax=Chroococcales RepID=A3YW71_9SYNE Length = 337 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/201 (26%), Positives = 99/201 (49%), Gaps = 9/201 (4%) Query: 148 VITRQANFLHNPDR----VLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQP 203 ++ + FLH DR VL + ++ L + A L ++ Q +T +P Sbjct: 122 LLIHREEFLHRADRLGCSVLEQVLPRNWLTLDPGRFARLRRYLHQLFSTLETDPTLQQVA 181 Query: 204 AVRKVLGDNLL-MAMGAMLEEAQPMVTAESISHQSYR-RLLSRAREYVLENMSEPVTVLD 261 +++ ++L+ + + A++ +S+ R L+ A+ ++ + +P+ + Sbjct: 182 GFDELVSNDLIPLMLEALIHGGH---AGDSLPRAPSRIELVKAAQRWMEAHPRQPIHLEG 238 Query: 262 LCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFW 321 LC ++H SRR+L F LG+GP +L+ RL+ +R+EL+ MT+ A WGF Sbjct: 239 LCREVHTSRRSLIQGFREHLGMGPMTYLRLHRLHGIRQELLGADPSQMTIGSRAAAWGFL 298 Query: 322 HLGQFATDYQQLFSEKPSLTL 342 + G FA Y LF E+PS T+ Sbjct: 299 NPGHFARQYANLFGEQPSETV 319 >UniRef50_Q6W1W0 Putative AraC family transcriptional regulatory protein n=1 Tax=Rhizobium sp. NGR234 RepID=Q6W1W0_RHISN Length = 325 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 1/105 (0%) Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 R + +A E+++ N+S+P+T++++ VS RTLQ F P ++L+ +RL A+R Sbjct: 221 RHVKKAVEFMMANLSKPITLVEVAAVCGVSSRTLQQGFRQFKMTTPMSYLQDLRLKALRE 280 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 EL ++ D A +WGF H+G+ ATDY+ F E PS TL Sbjct: 281 ELTQA-RPGQSIADIAFKWGFTHMGRLATDYRNRFGELPSQTLRS 324 >UniRef50_C5AKE9 Transcriptional regulator, AraC family protein n=2 Tax=Burkholderia RepID=C5AKE9_BURGB Length = 344 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/108 (38%), Positives = 64/108 (59%), Gaps = 4/108 (3%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 + R EY+ ++ EP+T+ L +VS TL AF G+ P A+++++RL VRR+L Sbjct: 233 VRRVEEYIRTHLQEPLTIEQLAEFGNVSASTLFAAFKHYHGVTPMAFVRQLRLERVRRDL 292 Query: 302 ISPWSQSMT----VKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 I + T V D A++WGF HLG+FA +Y++ F E PS +L R Sbjct: 293 IGADAMHGTGRPSVTDIALKWGFAHLGRFAMEYKRAFGESPSASLRMR 340 >UniRef50_B5ZVG3 Transcriptional regulator, AraC family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B5ZVG3_RHILW Length = 322 Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 1/104 (0%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 L RA E+ N + P+T+ D+ + VS RTLQ F + L P ++L+++R RR+L Sbjct: 219 LRRAMEFARANAALPITIADMASVAGVSVRTLQANFRSFLNTTPTSFLRQLRFEGARRDL 278 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 I + + TV A QWGF H+G+F+ +Y+ F PS L +R Sbjct: 279 IHA-APTATVTHIARQWGFVHMGRFSAEYRSHFGVSPSADLGRR 321 >UniRef50_B8ESU5 Transcriptional regulator, AraC family n=1 Tax=Methylocella silvestris BL2 RepID=B8ESU5_METSB Length = 327 Score = 77.8 bits (190), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 42/103 (40%), Positives = 56/103 (54%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 L RA YV +SE +++ DL N S RTL F+ P ++KRIRL RREL Sbjct: 222 LRRAERYVKSRLSETISIDDLVNASGASMRTLYKVFNTHHNATPMGYVKRIRLEHARREL 281 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 + TV + AM G HLG FA DY++++ E PS TL + Sbjct: 282 ENIDGSVRTVAEVAMAVGMEHLGNFAADYKKIYHELPSETLRR 324 >UniRef50_C3MI82 Putative AraC family transcriptional regulatory protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3MI82_RHISN Length = 333 Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 68/114 (59%), Gaps = 4/114 (3%) Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 R + RA E++ N+S+P+T+ ++ R+LQ+ F P+++L+ +RL+AV + Sbjct: 221 RHVKRAVEFMRANLSKPLTIQEIALASGSGIRSLQDGFRRFKQTTPSSYLQYLRLDAVHQ 280 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ---RMREWG 350 EL+ S S TV D A +WGF H G+FA DY++ F + PS TL R+R G Sbjct: 281 ELLQAKS-SQTVCDIARKWGFSHSGRFAADYRKRFGQAPSQTLQSSSFRIRPPG 333 >UniRef50_Q89NR2 Bll3772 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89NR2_BRAJA Length = 362 Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 53/156 (33%), Positives = 80/156 (51%), Gaps = 4/156 (2%) Query: 189 ALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREY 248 LA+ C +P A+ + + + LL + A L S +R+L++R E Sbjct: 200 CLASRCNDPRQFE--AIDRPIQERLLEGLDAALAPVDAQDRRRG-SFDKHRKLVARLDEA 256 Query: 249 VLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQS 308 + P+ DL N L VS RTLQ+A A+ G+ + L+ RL + R +L++ Sbjct: 257 ATLSGGIPLYSGDLANALGVSVRTLQSATQAVHGVSLHHHLRLKRLWSTRTQLLT-GGDG 315 Query: 309 MTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 MTVK AA+ GFWH+G+F+ Y+ F E PS TL Q Sbjct: 316 MTVKAAALANGFWHMGEFSKLYRTTFGEMPSGTLAQ 351 >UniRef50_A1T1B9 Transcriptional regulator, AraC family n=2 Tax=Mycobacterium RepID=A1T1B9_MYCVP Length = 331 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/102 (36%), Positives = 56/102 (54%) Query: 241 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE 300 LL RA Y+ N + + D+ +HV+ R LQ F L + P +L+R+R++ RE Sbjct: 228 LLRRATAYIEGNADADIALADIAGSVHVTPRALQYMFRKYLDMTPMEYLRRVRMDHAHRE 287 Query: 301 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 LI + TV+ A +WGF H G+FA Y++ + PS TL Sbjct: 288 LIKADAGQTTVQIVAARWGFAHTGRFAAMYREAYGRNPSDTL 329 >UniRef50_C6WIT0 Transcriptional regulator, AraC family n=2 Tax=Actinomycetales RepID=C6WIT0_ACTMD Length = 331 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 70/133 (52%) Query: 213 LLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRT 272 L A+ A P+ + + S ++ R + RA ++ N ++ ++ HV+ R Sbjct: 199 LAAAVLAAFPTTAPVGPSAADSRDAHPRTVRRAVAFIEANAGRDLSAAEIAAAAHVTPRA 258 Query: 273 LQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQ 332 +Q AF LG P A+L+R+RL+ R +L++ S TV + A++WG+ G F+T Y++ Sbjct: 259 IQLAFRRHLGTTPTAYLRRVRLDGARAQLLAAEPGSTTVTEVALRWGYSRPGVFSTHYRE 318 Query: 333 LFSEKPSLTLHQR 345 E PS TL R Sbjct: 319 AHGEPPSRTLRGR 331 >UniRef50_Q39MU6 Transcriptional regulator, AraC family n=10 Tax=Burkholderia RepID=Q39MU6_BURS3 Length = 355 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 61/105 (58%), Gaps = 1/105 (0%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 + R +Y+ ++ EP+T+ L VS TL F GI P +++++RL VR EL Sbjct: 247 VRRVEDYIRAHLDEPLTIERLAELAGVSPSTLFAGFRHRHGITPMGFVRQLRLQHVREEL 306 Query: 302 ISPWSQS-MTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 ++ S +V D A++WGF HLG+FA +Y++ F E PS TL R Sbjct: 307 LADASPGHASVTDIALKWGFAHLGRFAIEYKRAFGESPSATLRMR 351 >UniRef50_C3KLQ8 Probable transcriptional regulator protein, AraC family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KLQ8_RHISN Length = 341 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 3/108 (2%) Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 R L RA EY++ N++EP++V D+ + S R LQ AF P +L+++RL VR+ Sbjct: 220 RNLKRAIEYMVANIAEPMSVADIAREAGTSVRALQTAFQQFKDTTPLNYLRQMRLEGVRK 279 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS--LTLHQR 345 L + ++++ A WGF H+G+F+ Y F + PS L LH R Sbjct: 280 TLCDD-ANTLSIAQVARAWGFTHMGRFSAVYHDAFGQTPSETLKLHSR 326 >UniRef50_Q9KW95 Riorf89 protein n=2 Tax=Agrobacterium rhizogenes RepID=Q9KW95_AGRRH Length = 194 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/104 (39%), Positives = 58/104 (55%), Gaps = 1/104 (0%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 + RA +Y+ N+++ +TV + ++ S R LQ AF G P +L+ IRL A RR L Sbjct: 92 VKRAIDYMHANLAQSITVALIAAEIGTSVRALQAAFQRFKGTTPLGYLRTIRLEAARRAL 151 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 + S ++ DAA GF H+G+FA Y Q F E PS TL R Sbjct: 152 VGDGG-SRSISDAARNAGFSHMGRFAAAYYQAFGETPSETLRIR 194 >UniRef50_UPI0001AF5566 helix-turn-helix domain-containing protein n=2 Tax=Actinomycetales RepID=UPI0001AF5566 Length = 338 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 37/102 (36%), Positives = 57/102 (55%) Query: 241 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE 300 LL RA ++ EN + + + D+ ++V+ R LQ F L P +L+R+RL+ RE Sbjct: 235 LLRRAMAFIEENAHQDIALADIAAHVYVTPRALQYMFRQRLDCTPMQYLRRVRLDRAHRE 294 Query: 301 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 L+ S TVK A +WGF H+G+FA Y++ + P TL Sbjct: 295 LLDSSRASATVKQIANRWGFIHIGRFAIYYRETYGRSPHATL 336 >UniRef50_C6B4N8 Transcriptional regulator, AraC family n=13 Tax=Rhizobium RepID=C6B4N8_RHILS Length = 333 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 1/108 (0%) Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 R + RA E++ N+ +P+T+ + VS R L+ F A G P +L +RL A R+ Sbjct: 226 RHVRRAIEFMHANIDQPITMPKVAEAAGVSSRALETGFRAFRGTSPAVYLLTLRLRAARQ 285 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 +L+ P S+ T+K ++WGF+H G+F+ Y+ + E PS T + +R Sbjct: 286 DLLDPESKE-TMKAICLKWGFFHFGRFSAVYKTTYGEYPSDTRKRVIR 332 >UniRef50_B2I0G9 AraC-type DNA-binding domain-containing protein n=12 Tax=Proteobacteria RepID=B2I0G9_ACIBC Length = 352 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 84/189 (44%), Gaps = 10/189 (5%) Query: 157 HNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMA 216 H D ++L L+ Q A V+ + + LH P K NL A Sbjct: 153 HIADSENNLLVFDPKLDFSTQGGAYFLQLVRTLMDALACDQHPLHHPLAFKQFESNLFNA 212 Query: 217 MGAMLEEAQPMVTAESISHQSYRRL----LSRAREYVLENMSEPVTVLDLCNQLHVSRRT 272 L QP I + + + + R Y+ E++ EP+ V L VS RT Sbjct: 213 ----LIYGQPNNALHKIDYYKEKTVSPYFVKRTEAYIKEHLHEPLNVEILAEHAGVSVRT 268 Query: 273 LQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQ 332 L F LG P ++LK +R EL+ +++++V D A +WGF HLG+F+ +Y++ Sbjct: 269 LFTGFKNYLGTTPMSYLKELRFEQAHLELMH--NENLSVTDVAFKWGFTHLGRFSQEYKR 326 Query: 333 LFSEKPSLT 341 + E PS T Sbjct: 327 RYGELPSST 335 >UniRef50_D1SW59 Transcriptional regulator, AraC family n=5 Tax=Proteobacteria RepID=D1SW59_9BURK Length = 341 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 2/105 (1%) Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 R + RA++Y+ + EPV V L VS R+L F LG+ P +L+ +R+ VR Sbjct: 238 RHVRRAQDYLQAHAHEPVCVEQLAEVAGVSVRSLYAGFKEFLGVSPMQYLRDLRMEHVRT 297 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 EL+ ++ V A++WGF HLG+F+ +Y+Q + E PS TL + Sbjct: 298 ELLG--GEASNVAGIALRWGFAHLGRFSNEYKQRYGESPSQTLRR 340 >UniRef50_A6QA54 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QA54_SULNB Length = 313 Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 59/100 (59%) Query: 245 AREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISP 304 AR+ + N+ E + L +L +S+R LQ F GI P +L +R+NAVR+EL+ Sbjct: 214 ARDLLHANVHERFDSVTLAKELGISQRQLQRVFKETYGISPKRYLLNLRINAVRKELLMA 273 Query: 305 WSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 ++ T+ A+++ F+ L F+ Y+ LF+E PS TLH+ Sbjct: 274 DPRTATISSIALKYDFFDLNHFSKIYKTLFNELPSKTLHK 313 >UniRef50_B9JJ58 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JJ58_AGRRK Length = 326 Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 4/136 (2%) Query: 212 NLLMAMGAMLEEAQPMVTAES---ISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHV 268 NL A+ ++ E P +E+ I+ R + RA +++ N+ P+++ D+ +V Sbjct: 192 NLTGAITNLILETVPHRFSEALARIAPAPAPRHVRRAIDFMQANLMRPLSIADMAAVCNV 251 Query: 269 SRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFAT 328 S R+LQ F P A+L+ +RL A REL + +TV A++WGF H G+FA Sbjct: 252 SVRSLQKGFRDFKMTTPMAYLQHLRLEAAHREL-QEATPGLTVAAIALKWGFTHFGRFAV 310 Query: 329 DYQQLFSEKPSLTLHQ 344 DY+ F + PS TL + Sbjct: 311 DYRLRFGQLPSQTLRR 326 >UniRef50_Q987P8 Transcriptional regulator n=1 Tax=Mesorhizobium loti RepID=Q987P8_RHILO Length = 299 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 79/322 (24%), Positives = 121/322 (37%), Gaps = 51/322 (15%) Query: 39 DVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWF 98 D E ++ W+Q Y Q+ G + G ILL +++ RE + Q S F Sbjct: 9 DATEQEASLPGWRQEYRQVSTGGYDGRTMAILLPGVEILRETISVGTEQMFSAPEGSMIF 68 Query: 99 GIPATRGEQGFI-GSQCLGSAEIA----TRPGGTEFELSTPDDYTILGVVLSEDVI---- 149 R + G + G + A R G + D +L +VL D + Sbjct: 69 YYYPKRDRSELVRGEKATGVSGFALNWTNRIGFMD------ADSDLLMLVLRRDAVADED 122 Query: 150 -TRQANFLHNP--------DRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENL 200 +R A + P D +L +L ++Q WG LA Sbjct: 123 RSRIAELVEPPLENAAFLADWLLSLLGG-----ARQQSHPCAWGKFDGVLA--------- 168 Query: 201 HQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVL 260 V+ D + L P + + Q YR++ R+ + + P +V Sbjct: 169 ------DVITDRFELLFQKSLVRQTPHIAQ---TEQIYRKI----RDRIFDAPDMPHSVK 215 Query: 261 DLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGF 320 L L VS L+ + + I + L +RLN RR+L+ V D AM WGF Sbjct: 216 SLSRDLGVSAFNLRASCQSFTQIPLDRILMMLRLNGARRDLLHARCSPRKVSDIAMDWGF 275 Query: 321 WHLGQFATDYQQLFSEKPSLTL 342 +H +FA Y+ LF E PS TL Sbjct: 276 FHWSRFALRYKSLFGETPSQTL 297 >UniRef50_C6B5E0 Transcriptional regulator, AraC family n=7 Tax=Rhizobium RepID=C6B5E0_RHILS Length = 343 Score = 74.3 bits (181), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 1/104 (0%) Query: 244 RAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELIS 303 RA +Y+ N++EP+T+ + + + VS R LQ F A G P +L+ IRL A R +L Sbjct: 239 RAIDYMHANIAEPLTMTMVADGVGVSLRALQTGFRAFRGTSPGGYLRTIRLQAARDQLRD 298 Query: 304 PWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 P +Q +V++ WGF H G+F+ Y+ F E P T Q R Sbjct: 299 PMNQR-SVREICATWGFSHAGRFSIVYRSAFGESPRDTRLQAER 341 >UniRef50_D2BF03 AraC family transcriptional regulator n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2BF03_STRRD Length = 329 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 59/106 (55%) Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 +++ RA E++ + +P+T D+ + VS R+LQ F LG+ P +L+ +RL V Sbjct: 224 KVVRRAMEFIDGHAHQPLTTDDVARAVAVSGRSLQEGFRRHLGLTPMTYLRDVRLGRVHE 283 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 EL++ TV A +WGF H G+FA Y+ + + PS TL R Sbjct: 284 ELVTGDPARCTVTGVAARWGFLHQGRFAAAYRARYGQAPSHTLRGR 329 >UniRef50_B6A526 Transcriptional regulator, AraC family n=4 Tax=Rhizobium RepID=B6A526_RHILW Length = 338 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 35/103 (33%), Positives = 62/103 (60%), Gaps = 1/103 (0%) Query: 245 AREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISP 304 A +++ N+S+P+T+ + + VS R L+ F + P A+L+ +RL AVR +L+ P Sbjct: 228 AIDFMQANVSKPITMAVIAEAVGVSVRALEMGFRSFRETTPAAYLRTLRLRAVRNDLLEP 287 Query: 305 WSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 S +V+ ++WGF+H G+F+ Y+ ++ E PS T +R R Sbjct: 288 -SNRESVRAVCLKWGFFHFGRFSAVYRSVYGESPSETRKRRAR 329 >UniRef50_A0QJX7 Transcriptional regulator, AraC family protein n=2 Tax=Mycobacterium avium RepID=A0QJX7_MYCA1 Length = 358 Score = 73.9 bits (180), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 89/180 (49%), Gaps = 10/180 (5%) Query: 167 RNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQP 226 R +S V+ H+A + + A +P+ QP + + L GA+LE Sbjct: 185 RPRSRAAVRAWHRALDYAMLTLA------SPDTARQPLIAAGMAGLL---AGALLECYPS 235 Query: 227 MVTAES-ISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGP 285 +T + +S + L A ++ + +E + + D+ +H++ R +Q F L P Sbjct: 236 NLTEQDPVSDLALPETLKEAVSFIHRHAAEDIGINDVAAAVHLTPRAVQYLFRRQLDTTP 295 Query: 286 NAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 +++R+RL+ +EL++ + S TV + A +WGF H G+FA Y+Q + + P TL Q+ Sbjct: 296 TEYMRRVRLSRAHQELVAATTASSTVTEIAQRWGFAHTGRFAVLYRQTYGQSPHTTLRQQ 355 >UniRef50_A1K6X6 Putative AraC-family transcriptional regulator n=1 Tax=Azoarcus sp. BH72 RepID=A1K6X6_AZOSB Length = 328 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 1/106 (0%) Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 R + RA E + +P+T+ L + VS RTL + F LG+ P +L+ +R+ R Sbjct: 223 RHVRRAEELMRGCPEQPITMESLAAHVGVSARTLYDGFRNFLGVSPMRYLRDLRMERARA 282 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 +L+ P +Q +V A WGF+ LG+FA DY++ + E P T+ +R Sbjct: 283 DLLDP-AQPASVTTIATHWGFFQLGRFAADYRRRYGEHPRETMARR 327 >UniRef50_A1WJA6 Transcriptional regulator, AraC family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WJA6_VEREI Length = 327 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 5/145 (3%) Query: 200 LHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTV 259 L PA L + LL A A+L P A +++ R L RA+EY+ N + Sbjct: 183 LRHPAAYAALEEFLLSAFTALLS---PPDAARCLANPGDARCLRRAKEYIHANPERALRC 239 Query: 260 LDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR--ELISPWSQSMTVKDAAMQ 317 D+ + VS RTL+ F + P A+ +R RL AV L +++ V + A+ Sbjct: 240 ADIASHACVSPRTLEAVFKRCGEVSPLAYARRCRLQAVHEALRLARHEGRAVNVTEVALS 299 Query: 318 WGFWHLGQFATDYQQLFSEKPSLTL 342 +GF H+G+FA Y++ F+ PS TL Sbjct: 300 YGFLHMGRFAAQYREQFACSPSETL 324 >UniRef50_D1BV80 Transcriptional regulator, AraC family n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BV80_XYLCX Length = 322 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 2/110 (1%) Query: 235 HQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRL 294 H + R++ RA + E+ +EP+ D+ + +S R LQ F A L P A+++ RL Sbjct: 213 HSTPERVIRRAARLIEEHCAEPLGTPDIAEAVGISVRALQAGFKAHLSTTPMAYMRHARL 272 Query: 295 NAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 VR L + S V +AA +WG HLG+F+ DY+ F E PS T + Sbjct: 273 RRVRGSLTDGSAHS--VAEAASRWGVTHLGRFSADYRAAFGEFPSETFRR 320 >UniRef50_B0SX63 Transcriptional regulator, AraC family n=1 Tax=Caulobacter sp. K31 RepID=B0SX63_CAUSK Length = 374 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 34/88 (38%), Positives = 51/88 (57%) Query: 255 EPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDA 314 + V + D+C L++SRRTL AFH L + P A+L+ ++A R + + TV Sbjct: 278 QAVQIEDICRALNISRRTLYRAFHDQLDVSPKAYLRLKNMSAARARFLGAGVRPTTVTQV 337 Query: 315 AMQWGFWHLGQFATDYQQLFSEKPSLTL 342 A+ GFW LG+F+ Y+ +F E PS TL Sbjct: 338 ALDHGFWELGRFSGAYRAMFGESPSETL 365 >UniRef50_B3Q2F7 Probable transcriptional regulator protein, AraC family n=4 Tax=Rhizobium etli RepID=B3Q2F7_RHIE6 Length = 321 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 73/128 (57%), Gaps = 3/128 (2%) Query: 217 MGAMLEEAQPMVTAE--SISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQ 274 M ++E AQ ++E ++ + + RA +Y+ N++ P+++ ++ VSRRTLQ Sbjct: 192 MELLIEAAQHRYSSELCRVAESPLPKAVKRAVDYMRANITRPLSLEEIATACGVSRRTLQ 251 Query: 275 NAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLF 334 + F P A+L+ +RL V +EL++ ++V A++WGF H G+F+ DY++ + Sbjct: 252 SGFRNFRNTTPLAFLQHLRLELVHQELMT-GEPGLSVTQVALKWGFVHRGRFSADYRKRY 310 Query: 335 SEKPSLTL 342 PS TL Sbjct: 311 GVLPSETL 318 >UniRef50_Q46VL0 Transcriptional regulator, AraC family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46VL0_RALEJ Length = 368 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 1/104 (0%) Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 R + R +YV N P+TV DL VS R L+ F L P +L+ +RL+ VR+ Sbjct: 251 RHMQRVIDYVHANAETPLTVADLAQIACVSVRALEEGFRRHLNTTPVGYLRDVRLDGVRQ 310 Query: 300 ELI-SPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 LI + ++ ++ D A ++GF HLG+FA Y+Q F PS TL Sbjct: 311 ALIAAAGAEHASITDIAYRFGFTHLGRFAAYYKQRFGVSPSATL 354 >UniRef50_B9JJ57 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JJ57_AGRRK Length = 331 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 35/103 (33%), Positives = 61/103 (59%), Gaps = 1/103 (0%) Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 R + RA +++ N+S+P+++ D+ V R+LQ F G+ P A+L +R+ A R Sbjct: 219 RHIRRAIDFMQANLSQPISIGDIAQASQVGIRSLQEGFKRFKGMSPMAYLANLRMEAAHR 278 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 +L+ + + +V A +WGF HLG+F+ DY++ + PS TL Sbjct: 279 DLVM-ANPATSVAAIAQKWGFTHLGRFSGDYRKSYGCLPSHTL 320 >UniRef50_A1T7M7 Transcriptional regulator, AraC family n=2 Tax=Mycobacterium RepID=A1T7M7_MYCVP Length = 326 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 65/107 (60%), Gaps = 1/107 (0%) Query: 239 RRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVR 298 R ++ +A +++ ++++E +T+ L +H+S R++Q F + LG+ P A+++ RL V Sbjct: 220 RTVIQQAMDFIDDHLAERITMDSLAAAVHMSVRSIQQGFRSELGMSPMAFVRERRLERVH 279 Query: 299 RELISPW-SQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 EL S +TV A +WGF HLG FA +Y++ + E PS TL + Sbjct: 280 EELADAIPSDGVTVTAVAERWGFHHLGSFAVEYRKRWGEAPSETLRR 326 >UniRef50_B5W7W7 Transcriptional regulator, AraC family n=1 Tax=Arthrospira maxima CS-328 RepID=B5W7W7_SPIMA Length = 342 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 2/174 (1%) Query: 168 NQSALEVKEQHKAALWGFVQQALATF-CENPENLHQPAVRKVLGDNLLMAMGAMLEEAQP 226 NQ+ L V A F+QQ T C L P +L + L +L+ Sbjct: 151 NQAVLTVHPIRFANFTRFMQQWFPTAECLYRRGLLTPQEAALLREKFLCQFRELLDHTFE 210 Query: 227 MVTAESISHQSYRR-LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGP 285 I + R + + + + N+++ T +LC Q +S R +Q AF I G+G Sbjct: 211 QRGDRQIFKPTRRYWIFATVQAMIDSNLAKNFTNEELCQQCCISPRAMQYAFKEITGVGV 270 Query: 286 NAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 +++ +LNAVR EL P + T+ A +GF H+G+F+ + + F E PS Sbjct: 271 QQYIRARKLNAVREELCGPSADPSTIYAIASAYGFSHMGRFSEQFYRCFGEYPS 324 >UniRef50_D0T367 Transcriptional regulator n=2 Tax=Acinetobacter radioresistens RepID=D0T367_ACIRA Length = 330 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 1/107 (0%) Query: 238 YRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAV 297 Y L+R E++ +N+ + + + DL +S++ L F L PNA+++ RL + Sbjct: 221 YPDFLNRLLEFIQKNIQQKIEISDLEYASGLSKKKLNTIFKKYLKCSPNAYIRHYRLKCI 280 Query: 298 RRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 E IS S + + + A +WG HLG+F+ +Y++ F EKPS TL + Sbjct: 281 YNE-ISQSSYKINITEIAYKWGVTHLGRFSIEYKEAFGEKPSETLKK 326 >UniRef50_Q47GE0 Transcriptional regulator, AraC family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47GE0_DECAR Length = 330 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 60/105 (57%), Gaps = 1/105 (0%) Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 R + EY+ N P+T+ +L + VS R+L F GI P L+ IR++ VR Sbjct: 224 RYVRLVEEYMEANCHLPITLENLVSISGVSGRSLFAGFRKFRGISPMNHLRNIRMSRVRS 283 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 EL +P ++S +V + A +WGF+ LG+FA Y+ F E PS TL + Sbjct: 284 ELETPSTES-SVTEVATRWGFYELGRFAAAYKSRFGEYPSETLKR 327 >UniRef50_A6X646 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X646_OCHA4 Length = 318 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 4/150 (2%) Query: 195 ENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMS 254 ++ E + + L D+L+ ++ A L+ QP + + SY + RA +++L+N+ Sbjct: 171 KDKEAFFHGGLSERLEDSLMASLAAALD-TQPRARPLTSAVPSY---VQRAEKFMLDNLD 226 Query: 255 EPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDA 314 + +T+ +L + S RTL F ++ G P K +RL+ V EL+ + + Sbjct: 227 KQLTLQELVDATGTSARTLHRTFRSVRGNTPLGVFKNMRLDKVHAELVRGHAGPGDITRI 286 Query: 315 AMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 AM W F H+G F+ DY+Q F PS T+ + Sbjct: 287 AMAWAFNHMGLFSADYRQRFGYLPSETVRR 316 >UniRef50_C3KLK8 Probable transcriptional regulator protein, AraC family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KLK8_RHISN Length = 326 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 59/98 (60%), Gaps = 1/98 (1%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 + RA +++ N+ P+++ D+ + R+LQ F G P ++L ++R+ A R+L Sbjct: 221 VKRAVDFMHANLRAPISMSDIAGAAGIGVRSLQEGFKRFKGTSPISYLAQLRMEAAHRDL 280 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 + QS++V + A +WGF H+G+FAT+Y++ + PS Sbjct: 281 LE-ADQSVSVAEIARKWGFRHMGRFATEYRKCYGCPPS 317 >UniRef50_A7ICV7 Helix-turn-helix-domain containing protein AraC type n=2 Tax=Rhizobiales RepID=A7ICV7_XANP2 Length = 326 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 10/160 (6%) Query: 198 ENLHQPAVRKVLGDNLLMAM-------GAMLEEAQ--PMVTAESISHQSYRRLLSRAREY 248 +NL Q ++ LGD + M A++E P + + + + R++ RAR + Sbjct: 161 KNLFQ-SIHAPLGDGAVSRMDPAAYFLNALVEHVGRPPRASIGVLDPRGHERIVRRARAF 219 Query: 249 VLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQS 308 + EN+ P++V + S RTL AF +L P +++ ++RL+ +R ++IS ++ Sbjct: 220 IHENLGSPLSVERIATAAATSPRTLHRAFQMLLDETPYSYVLKLRLHRIRYDVISDTERT 279 Query: 309 MTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMRE 348 T+ A WG LG+ + Y++LF E PS T + RE Sbjct: 280 TTLATIANHWGISELGRLSGWYRELFGELPSQTRRRLARE 319 >UniRef50_A6VRG8 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VRG8_MARMS Length = 319 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 68/115 (59%), Gaps = 1/115 (0%) Query: 228 VTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNA 287 V ++ +S R + R R YVL+N++ + + +L + +SR++L N F G+ P+A Sbjct: 201 VGPSTLPKKSLHRHIERIRNYVLDNITTDIAIDELAHLCQISRKSLYNLFERETGLTPSA 260 Query: 288 WLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 +++R++L ++ EL + + V A+++GF +LG+F+ Y++ E PS TL Sbjct: 261 YIRRLKLESIHSELKNN-ERIKNVTQVALKYGFTNLGRFSAQYREQIGELPSQTL 314 >UniRef50_C6B4J9 Transcriptional regulator, AraC family n=8 Tax=Rhizobium RepID=C6B4J9_RHILS Length = 340 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 59/98 (60%), Gaps = 1/98 (1%) Query: 245 AREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISP 304 A +++ E+++EP+++ D+ VS RTLQ F P ++L +R+ A R+L+ Sbjct: 242 AIDFMQEHVAEPISLNDIAMAAKVSVRTLQQGFRQFRDTTPMSYLHDLRMAAAHRDLLES 301 Query: 305 WSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 + + D A++WGF HLG+FA +Y++ F + PS TL Sbjct: 302 -DRKQVIADVALRWGFSHLGRFAAEYRKRFGQLPSQTL 338 >UniRef50_B0JHC6 Transcriptional regulator n=3 Tax=Microcystis aeruginosa RepID=B0JHC6_MICAN Length = 334 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 79/321 (24%), Positives = 130/321 (40%), Gaps = 64/321 (19%) Query: 56 QLHPGKFHGEFTEILLDDIQVFREYTGLALRQ-SCL-----VWPNSFW-FGIPATRGEQG 108 QL F G + I++D++ L L Q +CL V + W F IP Sbjct: 43 QLSGDHFEGYLSRIIIDEVM-------LELSQRNCLTNVAGVIHSKMWVFAIPVQVNSVF 95 Query: 109 F-----IGSQCLG----SAEIAT--RPGGTEFELSTPDDY--------------TILGVV 143 F + + LG +EI+ P F+L D+Y L Sbjct: 96 FQNLYPLENNYLGIIPPKSEISVFQHPFSNRFQLYVHDNYLQQLCQTLELPEAKKFLNSS 155 Query: 144 LSEDVITRQANFLH---NPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENL 200 S VI H + ++ ML N ++ Q KA FV+Q L Sbjct: 156 ASSIVICPSEKIRHLQQSCHQLYQMLFNLDRQQISGQRKALRLNFVKQKL---------- 205 Query: 201 HQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVL 260 ++ + + L+ + + P T S +L +A E + +N+ +T+ Sbjct: 206 -----KEEIVKDFLLTLAVTKDIKTPKNTIRRTS------ILKKAEEMMRKNLRSDLTIP 254 Query: 261 DLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGF 320 +C L VS+RTL+ F + P + K +RLNA+ + L + +Q+ + + A + GF Sbjct: 255 AICQDLKVSQRTLEYIFKDFYQMSPYNYFKLLRLNALHQSL-NQNNQTKLIYEIAEELGF 313 Query: 321 WHLGQFATDYQQLFSEKPSLT 341 +H G A+DY++LF PS T Sbjct: 314 FHRGYLASDYKKLFGYFPSKT 334 >UniRef50_Q2T8G3 Transcriptional regulator, AraC family n=15 Tax=Burkholderia RepID=Q2T8G3_BURTA Length = 355 Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 53/174 (30%), Positives = 81/174 (46%), Gaps = 7/174 (4%) Query: 171 ALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTA 230 AL V H+ A G V+ L C A R +LG +L + ML P + Sbjct: 151 ALSVDAAHRGA--GVVRDMLGQLCRWCAPPDTAAARSMLGPDLTQWLMTMLLTRLPHSYS 208 Query: 231 ESISHQSYRRL---LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNA 287 ++++ R L + RAR++V ++ EP+ ++ L VS RTLQN F L P A Sbjct: 209 DALARGVRRPLPVHVRRARDHVDAHLGEPLPLVTLARAAGVSPRTLQNGFARFLQTSPAA 268 Query: 288 WLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 +++ RL+AV L++ + V D ++ G G FA Y + F PS T Sbjct: 269 YVRERRLSAVHDALLN--APGRGVADVLIEHGVHSFGHFAKAYARRFGHPPSAT 320 >UniRef50_C4RJP1 AraC family transcriptional regulator n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RJP1_9ACTO Length = 359 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 1/98 (1%) Query: 248 YVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL-ISPWS 306 Y+ E+ + +TV D+ + R LQ AF L P +L+R+RL V R+L + Sbjct: 262 YIEEHADQALTVTDVAIAARLGARALQQAFRRYLDTTPTLYLRRVRLERVHRDLQAAEPG 321 Query: 307 QSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 +TV A +WGF HLG+FAT Y++ + PS TL + Sbjct: 322 AGLTVAAVAARWGFVHLGRFATQYRRAYGRSPSQTLRE 359 >UniRef50_C5CKJ3 Transcriptional regulator, AraC family n=2 Tax=Variovorax paradoxus S110 RepID=C5CKJ3_VARPS Length = 354 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 3/123 (2%) Query: 225 QPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIG 284 +P A S S RL + A +V + P+ + DL VS RT LG+G Sbjct: 235 EPGPAAPGASGGSSARLQA-AERWVRTRLCAPLALEDLARAAGVSSRTFYMDCMRQLGVG 293 Query: 285 PNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 P AWL+ +RL++ RR+L++ + V D A GF HLG+F+ YQ+ F E P T+ + Sbjct: 294 PMAWLRDLRLDSARRQLLA--NPGRNVTDVATDCGFGHLGRFSAYYQRRFGELPRDTVAR 351 Query: 345 RMR 347 +R Sbjct: 352 ALR 354 >UniRef50_UPI0001C38021 transcriptional regulator, AraC family protein n=1 Tax=Arthrospira platensis str. Paraca RepID=UPI0001C38021 Length = 352 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 2/174 (1%) Query: 168 NQSALEVKEQHKAALWGFVQQALATF-CENPENLHQPAVRKVLGDNLLMAMGAMLEEAQP 226 NQ+ L V A F+QQ C L P +L + L +L+ Sbjct: 171 NQAVLTVHPIRFANFTRFMQQWFPRAECLYRRGLLTPQEAALLREKFLCQFRELLDYTFE 230 Query: 227 MVTAESISHQSYRRLLSRAREYVLEN-MSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGP 285 I S R + + +++N + + +T +LC QL +S R+LQ AF I G+G Sbjct: 231 QRGDRQIFKPSRRYWIFETVQAIIDNNLRQNLTNEELCQQLGISLRSLQYAFKEITGVGV 290 Query: 286 NAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 +++ +LNAVR EL + T+ A +GF H+G+F+ + + F E PS Sbjct: 291 QQYIRARKLNAVREELCGRSANPTTIYAIATAYGFSHMGRFSEQFHRYFGEYPS 344 >UniRef50_B9JM27 Transcriptional regulator protein, AraC family n=4 Tax=Rhizobium/Agrobacterium group RepID=B9JM27_AGRRK Length = 344 Score = 70.5 bits (171), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 1/107 (0%) Query: 235 HQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRL 294 H R + A E++ N+ P T+ + VS R+L+ F G P A+L+ +RL Sbjct: 218 HMIAPRHVHSAIEFMRANIDRPFTMQKVAEVAGVSIRSLEEGFRTFKGTTPAAFLRTMRL 277 Query: 295 NAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 AVR +L+ S +V+D ++WGF+H G+F+T Y+ + E PS T Sbjct: 278 RAVREDLLD-HSNRRSVQDICLKWGFFHFGRFSTVYRMTYGENPSDT 323 >UniRef50_Q2G526 Transcriptional regulator, AraC family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G526_NOVAD Length = 319 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 57/98 (58%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 L+ A + N+ PVTV L L VSRR+L+ AF P ++K +RLN++R+ L Sbjct: 218 LTAAIRLIDHNLHNPVTVEWLARTLGVSRRSLEQAFGEAFDTSPGRYIKVLRLNSLRQML 277 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 P + +++ D A + G WH G+ A+++++LF PS Sbjct: 278 RDPSNAEVSIGDLAARCGLWHQGRLASEFRELFGVLPS 315 >UniRef50_A1K6U8 Putative AraC-family transcriptional regulator n=1 Tax=Azoarcus sp. BH72 RepID=A1K6U8_AZOSB Length = 335 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 60/108 (55%) Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 R + RA +YV ++ E ++V D+ VS R L+ F P A+L+ +RL R+ Sbjct: 227 RHVQRAMDYVQAHIEEGISVGDIARAACVSVRALEEGFRKYCDTTPLAYLRELRLERARK 286 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 L++ +S +V D A ++GF HLG+F+ Y+ F E PS T+ + R Sbjct: 287 ALLALPGRSESVTDVAHRYGFVHLGRFSAYYKARFGETPSQTVGRARR 334 >UniRef50_A6Q8V3 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q8V3_SULNB Length = 325 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/228 (22%), Positives = 106/228 (46%), Gaps = 35/228 (15%) Query: 138 TILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENP 197 T+ ++ E +T L N +L +L + A E+ H +++ + + ++ Sbjct: 82 TLTLIIDKEGSLTANGKIL-NAGEIL-VLDDSDAFEIAFSHP------IRKGVISLSKDF 133 Query: 198 ENLHQPAVRKVLG------DNLLMAMGAMLEEAQ------------------PMVTAESI 233 ++H P + ++LG D++L + LEE + T E I Sbjct: 134 VDMHFPYLHQMLGRVYADRDDVLKDLILSLEENTEFKSSEIRTKLIEVLKFLSLDTQEKI 193 Query: 234 SHQSYRR--LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKR 291 + + ++ L+ R+Y+++ + + + DL + +S RTLQ F I G P + K Sbjct: 194 TKKLSKKEALIFDVRDYIIKLSEDNIPIEDLAKKFGMSERTLQTGFKKIFGYTPKKFTKL 253 Query: 292 IRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 ++LN R+++ S T+ + AM++GF + G FA ++++++ PS Sbjct: 254 LKLNLAHRDIVKN-DGSKTISEIAMKYGFGNFGLFAQEFKRIYGVLPS 300 >UniRef50_A6EWL3 Helix-turn-helix, AraC type:Arac protein, arabinose-binding/dimerization n=1 Tax=Marinobacter algicola DG893 RepID=A6EWL3_9ALTE Length = 341 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 2/100 (2%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 + + +Y+ N+ +++ +LC VS R++ N F A P +++K +L VR EL Sbjct: 218 MEKITQYIDNNLKNDISLDELCFISKVSVRSIYNMFSASFSTTPRSYIKNRKLQKVREEL 277 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 + ++++T + A +GF HLG+ + DY++LF E PS T Sbjct: 278 LGGRAKNVT--EVAFDYGFMHLGRLSCDYKKLFGELPSET 315 >UniRef50_A1WQJ9 Transcriptional regulator, AraC family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WQJ9_VEREI Length = 198 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/150 (33%), Positives = 73/150 (48%), Gaps = 12/150 (8%) Query: 193 FCE---NPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYR---RLLSRAR 246 FCE +P L P VR AM L AQ M E S Q R L RAR Sbjct: 49 FCEQLAHPSPLSMPKVRMTEE-----AMMRHLPCAQSMSVREHFSGQPAALAPRHLRRAR 103 Query: 247 EYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWS 306 E++ + + +++ D+ + VS R+L AF + + P L+ +RL+ +R EL S Sbjct: 104 EFMEAGLQQEISLKDIADHCGVSIRSLSRAFQSCYALSPMQVLRTLRLDRIRAELRRGAS 163 Query: 307 QSMTVKDAAMQWGFWHLGQFATDYQQLFSE 336 + +V + A+ WG HLG+FA Y+ F E Sbjct: 164 DA-SVSEVALHWGCSHLGRFAAAYRARFGE 192 >UniRef50_B3Q6V1 Transcriptional regulator, AraC family n=2 Tax=Rhodopseudomonas palustris RepID=B3Q6V1_RHOPT Length = 332 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 1/104 (0%) Query: 247 EYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWS 306 EY+ N +E +T+ L +S RT+ AF G P A+ KR+R+ VR+ L+ Sbjct: 228 EYIEANWNESLTIEKLVELTGMSARTVFKAFQRTRGYSPMAFAKRVRMERVRQLLLEAGG 287 Query: 307 QSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 + +V A+Q GF HLG FA DY++ F E PS TL + R G Sbjct: 288 DA-SVGAIAVQCGFPHLGHFAKDYRKTFGENPSDTLARGRRFRG 330 >UniRef50_A5CMT0 Putative transcriptional regulator, AraC family n=2 Tax=Clavibacter michiganensis RepID=A5CMT0_CLAM3 Length = 393 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 38/96 (39%), Positives = 49/96 (51%) Query: 247 EYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWS 306 EY+ + P+T D +S R LQ A P+A L+ IRL+ V EL Sbjct: 296 EYLHHHADRPITPADAARAAGISTRVLQLAVRRHEDTTPSALLRGIRLDRVHAELRDASP 355 Query: 307 QSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 + TV+ A QWGF HLG+FA Y + F E PS TL Sbjct: 356 TTTTVRAVAEQWGFGHLGRFAASYSERFGELPSATL 391 >UniRef50_P43462 Probable thc operon regulatory protein n=3 Tax=Rhodococcus RepID=THCR_RHOER Length = 332 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 53/95 (55%) Query: 245 AREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISP 304 A +Y+ + +P+TV + + VS R+LQ F LG P LK IR+ R++L+ Sbjct: 229 AVDYLEAHAQQPLTVAQVARNVGVSVRSLQVGFQNSLGTTPMRQLKIIRMQKARKDLLRA 288 Query: 305 WSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 S V + A +WGF H+G+FA +Y+Q F PS Sbjct: 289 DPASEGVTEIAQRWGFLHVGRFAGEYKQTFGVSPS 323 >UniRef50_Q1LI32 Transcriptional regulator, AraC family n=3 Tax=Cupriavidus RepID=Q1LI32_RALME Length = 337 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 1/101 (0%) Query: 247 EYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWS 306 EY+ + VT L VS R+L F G+ P +L+ +RL VR++L++ S Sbjct: 237 EYIHAHADAAVTPALLAEMAGVSLRSLYAGFREHRGLSPMTYLRTVRLERVRQDLLNDAS 296 Query: 307 QSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 S +V AA++WGF HLG+F+ +Y++ F E P TL +R R Sbjct: 297 LS-SVTAAALRWGFAHLGRFSVEYRRAFGECPGETLRRRGR 336 >UniRef50_Q0SIM0 Transcriptional regulator, AraC family protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SIM0_RHOSR Length = 301 Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 7/165 (4%) Query: 183 WGFVQQALATFCENPENL-HQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQ--SYR 239 W V + L EN +L ++P V K + LL++ L AQP E++ + Sbjct: 141 WRDVLELLRGEMENGGSLSNEPIVMKEF-ERLLLSQ---LIVAQPNNYTEALQRPVPAAP 196 Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 R + RA E + + E +TV D+ + +S R LQ+ F G P +L+ +R+ VR Sbjct: 197 RTIRRAVEILEHHADELLTVEDVASATGISVRALQDGFKKYYGTTPMGYLREVRMKTVRA 256 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 L+ + TV DAA + GF HL +F+ Y++ F E P TL + Sbjct: 257 WLLDADPSTTTVSDAASRCGFVHLERFSVQYREKFGETPPATLRR 301 >UniRef50_A3PHN4 Helix-turn-helix-domain containing protein, AraC type n=2 Tax=Rhodobacter sphaeroides RepID=A3PHN4_RHOS1 Length = 325 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 3/106 (2%) Query: 244 RAREYVLENMSE-PVTVLDLCNQLHVSRRTLQNAFHAI-LGIGPNAWLKRIRLNAVRREL 301 RA E ++ SE P+++LDL +L + R+LQ AF + G+ P RIRL+ R+ L Sbjct: 220 RAAEEIMHAHSEEPLSMLDLARRLDIGLRSLQLAFREVHDGLSPREVYSRIRLDRARQRL 279 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 ++ S + V A+ GF HLG+FA Y + F E PS TL +R R Sbjct: 280 LA-ASGADRVTTIALDSGFGHLGRFAMAYARTFGELPSETLARRRR 324 >UniRef50_UPI0001B4618F transcriptional regulator, AraC family protein n=1 Tax=Mycobacterium intracellulare ATCC 13950 RepID=UPI0001B4618F Length = 363 Score = 67.8 bits (164), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 8/204 (3%) Query: 147 DVITRQANFLHNPDRVLHMLRNQSA--LEVKEQHKAAL--WGFVQQALATFCENPENLHQ 202 DV+ A LH H +Q L+ + + +AA+ W + T + Q Sbjct: 160 DVVVLAAEVLHAVAAEWHTALSQRTQFLKWRPRSRAAVRAWHRALDYVLTTLACADTAQQ 219 Query: 203 PAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQ-SYRRLLSRAREYVLENMSEPVTVLD 261 P + + NLL GA+LE +T + + L A ++ + +E + + D Sbjct: 220 PMIAAGMA-NLLA--GALLECYPSNLTEQDPGGDGTLPETLKEAVSFIHRHTTEDIGIND 276 Query: 262 LCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFW 321 + +H++ R +Q F L P +++R+RL ELI+ + + TV + A +WGF Sbjct: 277 VAAAVHLTPRAVQYLFRRQLDTTPTEYMRRVRLRRAHLELIAASAGTSTVTEIAQRWGFA 336 Query: 322 HLGQFATDYQQLFSEKPSLTLHQR 345 H G+FA Y+Q + + P TL Q+ Sbjct: 337 HTGRFAVLYRQTYGQSPHTTLRQQ 360 >UniRef50_A1R1F9 Transcriptional regulator, AraC family n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R1F9_ARTAT Length = 307 Score = 67.8 bits (164), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 50/144 (34%), Positives = 73/144 (50%), Gaps = 12/144 (8%) Query: 205 VRKVLGDN----LLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVL 260 V+ +L D+ LLMAM QP E+ + ++ RL+ RE + + E +TV Sbjct: 172 VQGLLADSMVSRLLMAM-------QP-PAGEARNAEAEGRLVRECRELLERHAFEELTVP 223 Query: 261 DLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGF 320 D+ L VS RTLQ A A G P+ L+ IRL+ R L+ + +V A Q GF Sbjct: 224 DIAECLGVSVRTLQTALRAETGATPSELLRSIRLDRAREMLLEANPREQSVTAVAEQCGF 283 Query: 321 WHLGQFATDYQQLFSEKPSLTLHQ 344 H G+F+ Y + F E PS +L + Sbjct: 284 THQGRFSALYVKAFGELPSESLRR 307 >UniRef50_Q0RUS5 Possible transcriptional regulator, AraC family n=2 Tax=Rhodococcus RepID=Q0RUS5_RHOSR Length = 352 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 1/91 (1%) Query: 258 TVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQ 317 T+ DL + R LQ F G+ P+ +L+ +RL+ VR +L+ ++ TV A + Sbjct: 261 TIGDLAAIAGIGARQLQKLFQDQFGMPPSVYLRHLRLDGVRHDLLL-GDENTTVGHTAFK 319 Query: 318 WGFWHLGQFATDYQQLFSEKPSLTLHQRMRE 348 WGF HLG+FA Y+ F E PS TL +R+ Sbjct: 320 WGFNHLGRFANSYEDKFGESPSHTLRAAIRK 350 >UniRef50_Q0IDH2 Probable transcriptional regulator, AraC family, putative n=1 Tax=Synechococcus sp. CC9311 RepID=Q0IDH2_SYNS3 Length = 321 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 4/125 (3%) Query: 214 LMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTL 273 ++++ A L +P + QS + A Y+ N+++ +T+ DLC VS RTL Sbjct: 191 IVSLLATLISVEPDLLVSGKQAQSQPSYVQIALSYMENNINKNITLSDLCIACSVSGRTL 250 Query: 274 QNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQL 333 Q AF A++ P L+ +RLN +R ++I M + A Q G H G+ + Y+QL Sbjct: 251 QVAFQAVMSRTPLQVLQELRLNRLRDKII----DGMDISSACEQVGIQHSGRISAKYKQL 306 Query: 334 FSEKP 338 F E P Sbjct: 307 FGELP 311 >UniRef50_C5CKJ0 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CKJ0_VARPS Length = 329 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 2/101 (1%) Query: 241 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE 300 +L A Y+ N++ P+ + D+ VS RTL G+ P AWL+ RL+A R + Sbjct: 227 VLKAAGRYIQANLASPIALGDVAQAAGVSERTLHTHVTRAFGVRPMAWLRLQRLDAARAQ 286 Query: 301 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 L ++ ++ + A++ GF HLG+FA Y++ F E PS T Sbjct: 287 LRR--GEAPSIAEVALRCGFAHLGRFAAYYRERFGELPSET 325 >UniRef50_A9EZ15 Transcriptional regulator, AraC family protein n=2 Tax=Phaeobacter gallaeciensis RepID=A9EZ15_9RHOB Length = 335 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 1/111 (0%) Query: 231 ESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLK 290 E H S + A EY+ N+S P+ + D+ + ++ RTLQN F G P L+ Sbjct: 219 ERADHGSLPPGIRAAVEYIHANLSNPIQLSDIAAHVDLNIRTLQNGFRRAFGQSPMRVLR 278 Query: 291 RIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 RL+A L++ + + V AA GF HLG+FA DY+ F PS T Sbjct: 279 NARLDAAHYHLMA-QTDTPDVTTAAFSNGFSHLGRFARDYKARFGHSPSHT 328 >UniRef50_B4SLW6 Transcriptional regulator, AraC family n=3 Tax=Stenotrophomonas RepID=B4SLW6_STRM5 Length = 336 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 53/99 (53%) Query: 244 RAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELIS 303 RA ++ N+ + + ++C+ VS R L+ AF + G PN +L +RL A R L Sbjct: 227 RAENFMRLNLRRNIYMNEICDAAGVSERGLRYAFEDLFGTSPNRYLSMLRLCAACRSLSM 286 Query: 304 PWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 S +VK A+ G W L +FA +Y+++F E P TL Sbjct: 287 ADSSRRSVKAIALSCGLWDLSRFADNYRKVFGELPRDTL 325 >UniRef50_B2T964 Transcriptional regulator, AraC family n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2T964_BURPP Length = 324 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 60/259 (23%), Positives = 103/259 (39%), Gaps = 14/259 (5%) Query: 93 PNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEF-----ELSTPDDYTILGVVLSED 147 PNS G A + + +G +I P G E S ++T+ L E Sbjct: 70 PNSMCIGFMADGSDVTRYNTVAIGQEDIQIYPAGVELLYHAVGASRWVNFTVPEERLQET 129 Query: 148 VITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCE-NPENLHQPAVR 206 + R L P +++ ++ +AAL A+ P P Sbjct: 130 ALARTGRLLELPGFA------ATSVRLRPGGRAALTCLADDAMGIAKSLEPTGGMAPEFA 183 Query: 207 KVLGDNLLMAMGAMLEEAQPMVTAESIS-HQSYRRLLSRAREYVLENMSEPVTVLDLCNQ 265 + +L+ L A P +ES S + + L+ V+ + + ++ + Sbjct: 184 TEVSRSLVAGYVDELANATPGGQSESSSGERRHHHLILACERLVVSGEEADIALAEIARR 243 Query: 266 LHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQ 325 S R+L+ F +G+ P W +RLN R+L+ + TV D A +WGF H+ + Sbjct: 244 SGYSLRSLELIFRRSVGMTPGRWFMNVRLNGALRDLLGA-GPTCTVADVASRWGFRHMSR 302 Query: 326 FATDYQQLFSEKPSLTLHQ 344 F+ Y++ F E PS TL + Sbjct: 303 FSEQYRKAFGELPSRTLSR 321 >UniRef50_A1UDL6 Transcriptional regulator, AraC family n=6 Tax=Mycobacterium RepID=A1UDL6_MYCSK Length = 369 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/103 (33%), Positives = 57/103 (55%) Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 ++L A + + E+ T DL ++ +S R LQ +F +G+ P +L+ +RL Sbjct: 264 KVLRTALDLIEEHPERSWTTTDLAREVGISVRALQESFKRHVGLPPLTYLREVRLIRAHA 323 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 EL + ++TV AM+WGF HLG+F+ +Y++ F P TL Sbjct: 324 ELAASSESAVTVARVAMKWGFGHLGRFSAEYRRKFGVTPQHTL 366 >UniRef50_C4DJB3 DNA-binding domain-containing protein, AraC-type n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DJB3_9ACTO Length = 362 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 1/90 (1%) Query: 256 PVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQS-MTVKDA 314 P T L + + R L F +L P A+L+ +RL V REL P + +TV Sbjct: 264 PWTTAGLAREAGIGVRALYTDFRRVLDTSPMAYLRNVRLRRVHRELRQPSRNTGVTVAKV 323 Query: 315 AMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 A WGF HLG+FA Y++ + E PS TL + Sbjct: 324 ATTWGFSHLGEFAAAYRRFYGENPSATLRR 353 >UniRef50_Q3JKS7 AraC-family transcriptional regulator n=43 Tax=Burkholderia RepID=Q3JKS7_BURP1 Length = 481 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 58/102 (56%), Gaps = 1/102 (0%) Query: 244 RAREYVLENMSE-PVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELI 302 RA Y++E + + ++V ++ + V+ R LQ AF A LG+ P+ ++R R+ +R EL+ Sbjct: 380 RAYRYLMERLDQRELSVREIAAHIDVTERALQAAFKAYLGLSPSELIRRQRMERIRGELL 439 Query: 303 SPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 S ++ +V + A +WG H Y+++F E PS T + Sbjct: 440 SDAPRAASVLEIASRWGIQHRSTLVNGYRRMFDEAPSQTFDR 481 >UniRef50_A5V7Y2 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V7Y2_SPHWW Length = 326 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 1/104 (0%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 + RA Y+ ++ ++P+T+ D+ V RTL N F P L+ RL A L Sbjct: 214 VKRAEAYIDDHFADPITLDDIAAAAGVPARTLLNGFRRFRDTSPIRALRERRLTAAHERL 273 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 ++ S ++ D A+ GF H G+FA Y + F EKPS TL +R Sbjct: 274 LAAESDQ-SILDIALDVGFGHPGRFALAYTERFGEKPSTTLRRR 316 >UniRef50_Q5YXL4 Putative transcriptional regulator n=1 Tax=Nocardia farcinica RepID=Q5YXL4_NOCFA Length = 312 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 71/258 (27%), Positives = 107/258 (41%), Gaps = 25/258 (9%) Query: 92 WPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPG-GTEFELST-------PDDYTILGVV 143 +P ++ IP T G + S G +I + PG T F D ++GV Sbjct: 67 YPGAYEINIPVT----GRLVSTA-GDEQIWSEPGQATVFHADRRALIETWSADCRVVGVK 121 Query: 144 LSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQP 203 + D + R+A +H V LR L+ + + V+ A E E L P Sbjct: 122 FAADFLEREAERIHA-STVRGRLRLPHQLDFATPERRSWLRLVRTLSAQLNEPAELLANP 180 Query: 204 AVRKVLGDNLLMA--MGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLD 261 V L +L A + AM EE P+ + R + R + + E+ + P T+ + Sbjct: 181 LVADGLASSLATAFLLAAMPEENDPV-------GRMRPRTVKRVLDALHEDPARPWTLAE 233 Query: 262 LCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFW 321 + S R +Q AF LG P A L+ IRL EL + S TV D A +WGF Sbjct: 234 MAELAGSSVRRVQEAFAEHLGTTPTAALRDIRLARAHAELRT--GASRTVADVAARWGFS 291 Query: 322 HLGQFATDYQQLFSEKPS 339 +FA Y++ + PS Sbjct: 292 SPSRFAAAYRRRYGVPPS 309 >UniRef50_Q13EW4 Transcriptional regulator, AraC family n=5 Tax=Rhodopseudomonas palustris RepID=Q13EW4_RHOPS Length = 329 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 1/96 (1%) Query: 247 EYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWS 306 EY+ N +P+T+ L + +S R + F G P A+ K++RL R L + Sbjct: 228 EYIEANWMKPITIETLVDLTGISARGVFKTFQRNRGYSPMAFAKQVRLQHARAMLTQGRT 287 Query: 307 QSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 Q+ TV AA GF +LG FA DY++LF E+PS TL Sbjct: 288 QT-TVTAAAFACGFANLGHFAKDYRELFGERPSETL 322 >UniRef50_A5V7G7 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V7G7_SPHWW Length = 318 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 2/101 (1%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 + RA ++ +N+ E +T+ DL + + RTL F G+ P A + +RL+AV L Sbjct: 212 IRRAEAHMRQNLGEAITLTDLVEAVRSTPRTLSANFQTFRGVSPMARFRDLRLDAVHAAL 271 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 + + S+T +AA ++GF+HLG+F+ Y+ F E P TL Sbjct: 272 GNGEAGSVT--EAATRYGFFHLGRFSQAYRLRFGEFPRDTL 310 >UniRef50_A6EXV2 BenABC operon transcriptional activator BenR n=2 Tax=Marinobacter RepID=A6EXV2_9ALTE Length = 318 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 62/102 (60%), Gaps = 2/102 (1%) Query: 241 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE 300 +L + Y+ +N+ + + +L + ++S R++ NAF P ++K+++L +R + Sbjct: 215 MLGKMLRYIEQNVHRNIDIEELSSVSNMSVRSIYNAFSKAFATTPKCYIKQLKLQKLRED 274 Query: 301 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 L+ +++T + A+ +GF HLG+F++DY++ F E PS T+ Sbjct: 275 LLQGKCRNVT--EIALDYGFSHLGRFSSDYRKTFGELPSETM 314 >UniRef50_A4TA18 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Mycobacterium gilvum PYR-GCK RepID=A4TA18_MYCGI Length = 330 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 52/103 (50%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 L R ++ +N ++ D+ + VS TL+ F P L+R+RL V REL Sbjct: 228 LRRGTAFIDDNAHRDISPADVAHAARVSGPTLKELFVRHRNCTPLQRLQRVRLEHVHREL 287 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 Q+ TV D A +WGFW LG F T Y++ + + P TL Q Sbjct: 288 AMADPQTSTVADIARKWGFWRLGPFTTVYRETYGQVPDRTLDQ 330 >UniRef50_B7RQR5 Transcriptional regulator, AraC family n=1 Tax=Roseobacter sp. GAI101 RepID=B7RQR5_9RHOB Length = 341 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 1/99 (1%) Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 R + RA +Y+ N+SEP+T+LD+ ++ RTLQ AF P L+ RL+A Sbjct: 233 RDMRRALDYMHANLSEPITILDIAKAAEMNVRTLQKAFQRSFAKTPMQVLRDARLDAA-H 291 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKP 338 L+S + + V + A GF HLG+F++ Y+ F P Sbjct: 292 YLLSDRNDAPNVSETAYSCGFSHLGRFSSYYRSRFGHSP 330 >UniRef50_Q05335 XylDLEGF operon transcriptional activator 3 n=35 Tax=Bacteria RepID=XYLS3_PSEPU Length = 331 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 83/170 (48%), Gaps = 9/170 (5%) Query: 182 LWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISH--QSYR 239 L GF+ L C+ E H ++ +V + +LE V+ E+ S S+ Sbjct: 158 LDGFIN-LLGLVCDEAE--HTNSMPRVQEYYTGIIATKLLEMLSSNVSRETFSEGCPSFE 214 Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 R++ +++ +N+ + +++ L +S R+L F G P +++ +L +R Sbjct: 215 RVV----QFIEDNLKQSISLERLAELALMSPRSLYTLFEKHAGTTPKNYIRNRKLECIRA 270 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREW 349 L P + +V + A+ +GF+H G+FA +Y+ F E PS TL +R +W Sbjct: 271 RLSDPNANVRSVTEMALDYGFFHTGRFAENYRSTFGELPSDTLRRRKMKW 320 >UniRef50_UPI00019090B3 AraC family transcriptional regulator n=1 Tax=Rhizobium etli CIAT 894 RepID=UPI00019090B3 Length = 181 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 1/107 (0%) Query: 244 RAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELIS 303 R EY+ +N +P+T+ L + S R+L AF G+ P ++K++R+ + L S Sbjct: 74 RVEEYIRQNWDQPLTIEALALVANASVRSLFYAFKKGRGVSPMTFVKQVRMRNAKAMLAS 133 Query: 304 PWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 P S + +V A GF +LG FA Y F E PS TL + R+ G Sbjct: 134 P-SSATSVTSVAYACGFSNLGHFARYYYSTFGEHPSDTLRKAFRDSG 179 >UniRef50_Q07S24 Transcriptional regulator, AraC family n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07S24_RHOP5 Length = 414 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 1/102 (0%) Query: 246 REYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPW 305 ++YV N ++P++V DL V+ RTL F G P ++KR+RL+ RE++ Sbjct: 279 KQYVELNWNQPLSVSDLARAADVNARTLFKRFKQGCGYTPQEYIKRVRLHHA-REMLQRA 337 Query: 306 SQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 +S TV A++ F + G FA DY+ F E+PS TL + R Sbjct: 338 DRSTTVLGIALKCSFQNQGHFARDYRLAFGERPSDTLERARR 379 >UniRef50_Q3JJW1 AndR n=53 Tax=Burkholderia RepID=Q3JJW1_BURP1 Length = 405 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 1/105 (0%) Query: 241 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE 300 + RA+E++ +++P+ + D+ V RTL++ F G P +L++ RL R E Sbjct: 299 FVRRAQEFIGAQLAQPLQLADIAQAAGVPERTLRDGFLQFRGTSPMQYLRQRRLERAR-E 357 Query: 301 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 L+ + + + A+ GF H G+FA Y++ F E PS TL R Sbjct: 358 LLRTAAPERRIAEIALDCGFAHFGRFAIAYRERFGELPSATLADR 402 >UniRef50_A5V484 Transcriptional regulator, AraC family n=2 Tax=Sphingomonadaceae RepID=A5V484_SPHWW Length = 330 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 1/104 (0%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 + RAR+ + + + ++V DL NQ+ VS R+LQN F LG+ P +++R RL + L Sbjct: 225 VRRARDIIHASFDDSISVTDLANQVGVSVRSLQNGFRQFLGLTPVEYVRRHRLEKLHSAL 284 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 + S +V + ++ G + G++A Y+Q + +PS TL R Sbjct: 285 MDA-SPEASVTELMLECGIVNFGRYAQYYRQQYGCRPSETLRSR 327 >UniRef50_Q8RL38 Putative uncharacterized protein n=2 Tax=Burkholderiales RepID=Q8RL38_DELAC Length = 343 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 2/97 (2%) Query: 248 YVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQ 307 Y+ ++ PV V+DL VS RTL P L+ IRL+A R L+ +Q Sbjct: 247 YIRRHLCAPVGVIDLARAAGVSVRTLNIICREYRRETPMQVLRNIRLDAARSALL--LNQ 304 Query: 308 SMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 S++V AA +GF HLG+F+ Y++ F E PSLT Q Sbjct: 305 SVSVTQAAFDYGFGHLGRFSAYYKERFGELPSLTSSQ 341 >UniRef50_B2I0G2 AraC-type DNA-binding domain-containing protein n=13 Tax=Acinetobacter RepID=B2I0G2_ACIBC Length = 328 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 60/112 (53%), Gaps = 1/112 (0%) Query: 231 ESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLK 290 +S+SHQ + + R +++E+ E + DL VS+ L + F G P ++LK Sbjct: 212 KSLSHQDEPAYIRKVRNFIIEHAHEEICAEDLQRLAGVSKSKLYDEFQQYYGTSPMSYLK 271 Query: 291 RIRLNAVRRELISPWS-QSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 + RL + + L + + + +++ A WGF HL +F+ +Y++ F E PS T Sbjct: 272 KYRLQQIYKILSTTGADKKVSISKLAYDWGFNHLSRFSQEYREEFGENPSET 323 >UniRef50_Q5Z0F0 Putative transcriptional regulator n=1 Tax=Nocardia farcinica RepID=Q5Z0F0_NOCFA Length = 359 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 39/103 (37%), Positives = 59/103 (57%) Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 R ++RA E + + EP+TV D+ + + + RTLQ+ F P A+L+ +RL VR Sbjct: 243 RPIARAAELIEAHAHEPLTVDDIADAVGIGTRTLQDGFRRYYNTTPMAFLRDVRLRRVRT 302 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 +L+ TV D A++WGF H G+F+ Y+ F E PS TL Sbjct: 303 DLLQADPTLTTVTDIAIRWGFLHPGRFSVLYRDRFGESPSRTL 345 >UniRef50_C9N369 Transcriptional regulator, AraC family n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9N369_9ACTO Length = 315 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 5/148 (3%) Query: 200 LHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRR-----LLSRAREYVLENMS 254 L PAV ++ + + A+ A P +TA+ H++ R L RA+ ++ EN Sbjct: 164 LTGPAVEGLVVATAVQHLAAVTLSALPSITAQEEDHRTDSRDAHTETLRRAKAFIEENAH 223 Query: 255 EPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDA 314 + + D+ V+ R +Q AF P L+ +RL +L+ +V Sbjct: 224 RTIGLADIAAAAFVTPRAVQYAFSRHTDTTPLGHLRHVRLTRAHVDLVKADPHVSSVTRI 283 Query: 315 AMQWGFWHLGQFATDYQQLFSEKPSLTL 342 A WGF H+G+FA Y++ + P++TL Sbjct: 284 AAAWGFPHVGRFAAAYRRHYGVTPAVTL 311 >UniRef50_A1K4I0 Putative AraC-family transcriptional regulator n=3 Tax=Proteobacteria RepID=A1K4I0_AZOSB Length = 346 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 14/143 (9%) Query: 201 HQPA-VRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTV 259 HQPA V + L D+ A EA +TA S + R L +Y+ + P+++ Sbjct: 211 HQPAAVGRDLDDD------AGPAEAVIELTASS---RLAERKLDAVEDYMRSRLFAPISL 261 Query: 260 LDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVR-RELISPWSQSMTVKDAAMQW 318 DL VS RTL H G+ P L+ +RL+A R R L P++ +V + A+++ Sbjct: 262 ADLAKAAGVSARTLNILCHRYRGVAPMVLLRHVRLDAARARLLADPFA---SVTEVALEY 318 Query: 319 GFWHLGQFATDYQQLFSEKPSLT 341 GF HLG+F+ Y++ F E P T Sbjct: 319 GFGHLGRFSAYYRERFGELPRDT 341 >UniRef50_Q0FPK9 Transcriptional regulator, AraC family protein n=3 Tax=Rhodobacteraceae RepID=Q0FPK9_9RHOB Length = 348 Score = 64.3 bits (155), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 13/149 (8%) Query: 197 PENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESIS---HQSYRRLLSRAREYVLENM 253 P +HQPA +L A+ +LE + ++ ++ S L+ RA +Y+ + Sbjct: 188 PTLVHQPA------SDLFAAL--VLEHLRHLLASDGADPALDGSQDDLVRRALDYMSAYV 239 Query: 254 SEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKD 313 +P+TV + + + VS R LQ+AF G P L IRL R L++ S+T Sbjct: 240 GDPLTVRTIADAVGVSTRRLQDAFRLKTGRTPWEHLTGIRLENARTRLLAAAGPSVTA-- 297 Query: 314 AAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 A GF HLG+F+ Y+ + E PS+TL Sbjct: 298 IAFDCGFSHLGRFSQTYRNTYGEAPSVTL 326 >UniRef50_A5V4X1 Transcriptional regulator, AraC family n=2 Tax=Sphingomonas wittichii RW1 RepID=A5V4X1_SPHWW Length = 343 Score = 64.3 bits (155), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 1/105 (0%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 + R +Y+ E+ +P+++ ++ VS R+L F P +LK RL+ R+L Sbjct: 237 VRRVEDYIREHSRDPISLEEMIAVSGVSARSLHAGFRRFRDTTPMVYLKNHRLDLAHRQL 296 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 ++V + A+ GF HL +FA DY F E+PS TL +RM Sbjct: 297 KIAADDGLSVTEVALACGFTHLSKFARDYLDRFGERPSATL-KRM 340 >UniRef50_UPI0001746906 putative ethanolamine operon transcriptional regulator n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746906 Length = 339 Score = 64.3 bits (155), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 1/127 (0%) Query: 213 LLMAM-GAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRR 271 L+ AM GA+ AE Q + + RA ++L N++ P + D + L ++ R Sbjct: 183 LIFAMVGALASAPNRSSNAELARLQVALQTVKRAETFILSNLALPYSSRDFASVLSMTER 242 Query: 272 TLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQ 331 ++ F + G+ P W + LN R L ++ V D AM+ GF H G+F+ Y Sbjct: 243 NVELQFKKMFGMSPRRWRECFGLNMAYRRLTRARWKAGLVSDVAMECGFSHPGRFSASYG 302 Query: 332 QLFSEKP 338 +LF E P Sbjct: 303 KLFHELP 309 >UniRef50_Q39N46 Transcriptional regulator, AraC family n=2 Tax=Burkholderia cepacia complex RepID=Q39N46_BURS3 Length = 327 Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 1/111 (0%) Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 R + RA Y++E+ EP+T+ D+ V RTL + F P ++ RL R Sbjct: 218 RTVKRAEAYIVEHACEPITLADIALAAGVPVRTLLDGFQRFSHGSPMQLVRERRLERARD 277 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 +L+ ++ V D A+ GF +LG+FA Y++ F E PS TL + R G Sbjct: 278 QLLH-AREAERVADVALGCGFANLGRFAILYRETFGESPSDTLRRARRSAG 327 >UniRef50_B3QGC9 Transcriptional regulator, AraC family n=5 Tax=Rhodopseudomonas palustris RepID=B3QGC9_RHOPT Length = 334 Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 15/140 (10%) Query: 220 MLEEAQP--MVTAESISHQSYRRLLSR------------AREYVLENMSEPVTVLDLCNQ 265 ML E Q +V+ S++ +Y L R A E++ + + +T++DL Sbjct: 195 MLREMQQALVVSFLSVTRHNYSSQLDRDARDTAPDYVRVAEEFIEASWNRAITIVDLAAV 254 Query: 266 LHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQ 325 +V R+L AF G P A+ K +RLN R L+S S +V A GF +LG Sbjct: 255 TNVGVRSLFKAFQKHRGYSPMAFAKAVRLNKAREMLLS-GDPSRSVTSVAFACGFTNLGH 313 Query: 326 FATDYQQLFSEKPSLTLHQR 345 FA DY++ E PS TL +R Sbjct: 314 FANDYRRRHGELPSETLARR 333 >UniRef50_A5V4Y1 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V4Y1_SPHWW Length = 316 Score = 63.9 bits (154), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 1/103 (0%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 + + +Y++ + P+T+ L VS R L + F G P +LK +RL R +L Sbjct: 213 VRKVEQYIIAHADRPITLEQLVEVSGVSARALFDGFRRFRGTSPMVFLKSVRLERARDDL 272 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 + +V + A +WGF+ G+FA Y++LF E PS TL + Sbjct: 273 RNALPGE-SVTEIACRWGFYQFGRFAAHYRRLFGELPSETLRK 314 >UniRef50_UPI0001AF7528 hypothetical protein MkanA1_24775 n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF7528 Length = 350 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 55/106 (51%) Query: 237 SYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNA 296 S + L A ++ + + + V D+ +H++ R +Q F L P +L+RIRL+ Sbjct: 239 SVPKALQTAMSFIHRHAAMNIGVKDVAAVVHLTPRAVQYLFRQQLDTTPTEYLRRIRLHR 298 Query: 297 VRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 ++LIS TV + A +WGF H G+FA Y+Q + E P L Sbjct: 299 AHQDLISGDRSITTVSEIAQRWGFAHTGRFAVLYRQAYGESPHTAL 344 >UniRef50_Q7U5V1 Possible AraC-type regulatory protein n=1 Tax=Synechococcus sp. WH 8102 RepID=Q7U5V1_SYNPX Length = 214 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 4/97 (4%) Query: 252 NMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQS--- 308 N ++ +++ D+ + SR ++ ++ A G+GP LK+IRL V+ L++P Q+ Sbjct: 94 NPTQVISLEDITTTIFASRSSIVHSCRASFGMGPMTLLKQIRLGQVQAVLLNPQRQASMG 153 Query: 309 -MTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 +TV+ A +GF FA DY+QLF E PS TL + Sbjct: 154 FITVQAVATHFGFSSRNHFARDYRQLFGEAPSETLQR 190 >UniRef50_Q0S6X8 Transcriptional regulator, AraC family protein n=3 Tax=Rhodococcus RepID=Q0S6X8_RHOSR Length = 335 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 1/97 (1%) Query: 245 AREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISP 304 A +Y+ E E T D+ + + VS RTL AF L P +++ RL +R EL++ Sbjct: 232 AVQYIREYARELPTASDIADAVGVSVRTLSGAFRKYLDTTPAEYVREQRLQGIREELLTA 291 Query: 305 WSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 S TV A WG+ +LG FA Y++ F E PS T Sbjct: 292 -SPGETVASIAGAWGYVNLGLFAAAYRRRFGENPSQT 327 >UniRef50_C8S415 Transcriptional regulator, AraC family n=1 Tax=Rhodobacter sp. SW2 RepID=C8S415_9RHOB Length = 327 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 2/104 (1%) Query: 245 AREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISP 304 A E + E+ E +++ L +L V R+LQ AF + GP L R+RL+ R L+ Sbjct: 223 AEEIMREHCDEHLSMAALAQELGVGLRSLQLAFQQVRAAGPRVVLNRMRLDRARARLLDS 282 Query: 305 WSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL-HQRMR 347 ++ V A+ GF HL +FA Y++ + E PS TL HQ+ R Sbjct: 283 -AEDARVTTIALDCGFAHLSRFAQTYRETYGETPSETLAHQKRR 325 >UniRef50_B8Y4V1 EthR n=4 Tax=Corynebacterineae RepID=B8Y4V1_9NOCA Length = 331 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 53/96 (55%) Query: 247 EYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWS 306 + ++ +SE T ++ ++ +S R +Q F +G P+ +++ RL +L++ Sbjct: 234 DAIMARLSESFTFTEIAQEVGISLRAIQRGFAHHIGTTPSQFVRTERLRRAHVDLVAGDP 293 Query: 307 QSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 + V D A +WGF HLG+F+ Y++L+ PS TL Sbjct: 294 STTRVADVAARWGFTHLGRFSAQYRKLYGVSPSDTL 329 >UniRef50_A0K0Q9 Transcriptional regulator, AraC family n=2 Tax=Arthrobacter RepID=A0K0Q9_ARTS2 Length = 319 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 8/171 (4%) Query: 170 SALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVT 229 SA+ + H L G V +A EN E L P+ + L N L + ML M Sbjct: 150 SAVRLAGGH--GLTGIVGPFIAQLAENLEALSGPSGSR-LAANALDLVSTMLHSELDMAR 206 Query: 230 AESISHQSYRRLLSRAREYVLENMSEP-VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAW 288 +S+ Q L + REY+ N+++P ++ + +S R L N FH G +W Sbjct: 207 -DSMKPQVL--LATSVREYIEANLADPQLSPASIAAAHFISTRHLHNIFHET-GTTVASW 262 Query: 289 LKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 ++ RL +RR+L P +V A +WGF F+ ++ + E PS Sbjct: 263 IRSQRLERIRRDLRDPLLNGTSVGAVAARWGFLDAAHFSRTFRDAYGESPS 313 >UniRef50_C3UVB3 Putative AraC family transcriptional regulator n=1 Tax=Burkholderia sp. JS667 RepID=C3UVB3_9BURK Length = 323 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 1/105 (0%) Query: 245 AREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISP 304 A Y+ ++ E +T+ D+ + V RTLQ +F G P L+ RL+AVR+ ++S Sbjct: 217 AESYIEAHLHESITLDDIAKSVGVPVRTLQESFRRFRGSSPTQALREFRLDAVRKGILSG 276 Query: 305 WSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREW 349 + + AM GF HLG+FA + F E+PS T R + + Sbjct: 277 EGER-GISMVAMDCGFNHLGRFAAASRARFLERPSETAACRPKNF 320 >UniRef50_A5V5G7 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V5G7_SPHWW Length = 334 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 2/104 (1%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 + RA Y+ N P+++ D+ V RTL ++F P +LK +RL+ R L Sbjct: 233 VRRAEAYIHANAGAPISLSDIAVAAGVPARTLLDSFKHFRQTSPIRYLKDVRLDNARERL 292 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 + T+ + A++ GF HLG+FA DY + F E PS T R Sbjct: 293 RHRGAD--TIAEVALEAGFAHLGRFAADYFKRFGELPSDTQRSR 334 >UniRef50_B3QCR7 Transcriptional regulator, AraC family n=2 Tax=Rhodopseudomonas palustris RepID=B3QCR7_RHOPT Length = 335 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 3/119 (2%) Query: 226 PMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGP 285 P++ +E+ + + RR + + +Y+ +P+TV L VS RTL ++F G P Sbjct: 213 PLLMSEAAA--AGRRPVHKVADYLEAYWDQPLTVEMLARVSGVSVRTLFHSFRGQFGYSP 270 Query: 286 NAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 +++RIRL R++++ +++V A+ GF +LG FA Y++ F E PS TL + Sbjct: 271 MEFVRRIRLERA-RQMLAGADPALSVTSVALSCGFGNLGHFAGYYKKAFGEAPSATLSR 328 >UniRef50_B6B515 Transcriptional regulator, AraC family n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B515_9RHOB Length = 332 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 1/100 (1%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 + RA++Y+ N +EP+TV + + S RTLQ F G+ P +L+ +RL+ R L Sbjct: 218 IRRAQDYIHANAAEPLTVSAIAAEAGCSIRTLQAGFRQHFGLTPVEYLRDLRLDLARYLL 277 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 +S V A GF HLG+F+ Y+ F E PS T Sbjct: 278 LS-RPAGTPVSSIAYDSGFSHLGRFSQLYRARFGELPSTT 316 >UniRef50_Q07KT1 Transcriptional regulator, AraC family n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07KT1_RHOP5 Length = 328 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 1/103 (0%) Query: 245 AREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISP 304 A E++ + ++P+T+ L ++ VS RTL AF G P+A++K+ RLN ++++ Sbjct: 226 AEEFIEAHWNQPITIEKLTDETTVSSRTLLRAFLKHRGYSPHAFVKQTRLNR-SKQILER 284 Query: 305 WSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 +V A GF + G FA DY++ F E PS TL + R Sbjct: 285 GDPVTSVTSVAYACGFGNPGHFAKDYREAFGELPSDTLARAKR 327 >UniRef50_A5VE15 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VE15_SPHWW Length = 336 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 54/107 (50%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 + RA Y+ NM+ + + D+ + VS RTL F P A+LK RL+ R L Sbjct: 230 VRRAEAYIRANMARDLKMEDIVEESGVSSRTLFYGFRRWRQTTPMAYLKAARLDCARMAL 289 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMRE 348 +V D A+ G+ +L +F++DY+ F E+PS TL R+ Sbjct: 290 TGASVAGGSVTDVALGVGYQYLSRFSSDYRARFGERPSDTLLSVTRQ 336 >UniRef50_Q9AJR3 Transcriptional activator n=2 Tax=Proteobacteria RepID=Q9AJR3_BURST Length = 321 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 7/154 (4%) Query: 190 LATFCENPENLH-QPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREY 248 L+ CE E+ PA+++ LL + + LE V A S ++ S+ ++Y Sbjct: 170 LSLMCEEAESTTCTPAIQQHYAQILLRKLLSQLETN--TVDARSPGDS---QVFSKIKDY 224 Query: 249 VLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQS 308 +L N+ E +T+ ++ + +VS R L F+ P +++ ++L VR +L S Sbjct: 225 ILANLQENITLEEIASLANVSLRKLYVLFNIHAQESPRDFIQSLKLGRVRADL-QRARPS 283 Query: 309 MTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 V D AM++GF HLG+F+ Y+ F E PS TL Sbjct: 284 DNVTDIAMRYGFSHLGRFSAVYKARFGELPSQTL 317 >UniRef50_Q89CX9 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89CX9_BRAJA Length = 337 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 1/95 (1%) Query: 245 AREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISP 304 A EYV N + +T+ +L +Q + S R+L AF G P + K +RL R+ L+ Sbjct: 234 AEEYVEANWARAITIEELASQTNTSIRSLYAAFKKYRGYSPMRFAKTVRLRRARQMLLE- 292 Query: 305 WSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 + +V A + GF +LG FA D++Q+F E PS Sbjct: 293 GNPKTSVSQIAFKCGFGNLGHFAGDFRQMFGELPS 327 >UniRef50_D0LFC4 Helix-turn-helix-domain containing protein AraC type n=2 Tax=Actinomycetales RepID=D0LFC4_GORB4 Length = 318 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 70/287 (24%), Positives = 119/287 (41%), Gaps = 31/287 (10%) Query: 69 ILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPG-GT 127 + LD + + R G A+ +C +P ++ IP T G + S+ G E+ + PG GT Sbjct: 50 VELDGVTIGRLTWGTAVSIAC-EYPGAYEVNIPLT----GRLHSRS-GRDELVSTPGTGT 103 Query: 128 EFELSTPD-------DYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKA 180 F D ++GV + + R+A+ +H + L ++V+ A Sbjct: 104 VFTAGRASVITNWTADCEVIGVKFDAEYLEREADRIHA-TALRRRLTLPDQIDVQSDSGA 162 Query: 181 ALWGFVQQALATFCENPENLHQPAVRKVLGDNL----LMAMGAMLEEAQPMVTAESISHQ 236 +G V+ A E + L P V L + L+++ E A P Q Sbjct: 163 TWFGLVKALSAQVREPGDLLANPLVGPQLASAVSTAFLLSVSPEPERADP---------Q 213 Query: 237 SYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNA 296 ++ R + + E+ + P ++ ++ S R LQ AF L P L IRL Sbjct: 214 LRPGMVKRVLDALDEDPARPWSLAEMAGIAGTSVRRLQEAFAEYLERSPTRALADIRLAR 273 Query: 297 VRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 +L++ + TV D A +WGF +FA Y++ + PS L Sbjct: 274 AHADLLT---GTGTVADVAARWGFSSPSRFAAAYRRRYGASPSAVLR 317 >UniRef50_A1UF63 Transcriptional regulator, AraC family n=4 Tax=Mycobacterium RepID=A1UF63_MYCSK Length = 131 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 55/101 (54%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 L R+ ++ EN + + ++ +++ R +Q + LG+ P +L+R+RL+ R+L Sbjct: 17 LRRSVAFIHENADSDIGLAEIAAAANLTPRAVQYMYRRHLGVTPLEYLRRVRLDLAHRDL 76 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 + TV A +WGF H G+F+ Y++++ PS TL Sbjct: 77 QAADPAVDTVNSIAGRWGFSHAGRFSVAYRRMYGTPPSATL 117 >UniRef50_P31778 Regulatory protein hrpB n=70 Tax=Ralstonia RepID=HRPB_RALSO Length = 477 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 1/100 (1%) Query: 244 RAREYVLENMSEP-VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELI 302 RA Y++EN+ +T ++ ++V+ R LQ AF + +G+ P++ ++R+RL +R +L+ Sbjct: 376 RAYRYIIENIERSDLTTREVAAHINVTERALQLAFKSAVGMSPSSVIRRMRLEGIRSDLL 435 Query: 303 SPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 + D A +WG Y++ F+E PS T+ Sbjct: 436 DSERNPSNIIDTASRWGIRSRSALVKGYRKQFNEAPSETI 475 >UniRef50_Q0B345 Transcriptional regulator, AraC family n=5 Tax=Burkholderia cepacia complex RepID=Q0B345_BURCM Length = 477 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 57/100 (57%), Gaps = 1/100 (1%) Query: 244 RAREYVLENMSEP-VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELI 302 RA Y+++N+ + ++V ++ + + V+ R +Q AF LG+ P+ ++R R+ +R +L+ Sbjct: 376 RAYRYLMDNLDQKDLSVREVASHVGVTERAMQAAFKNHLGLSPSELIRRQRMERIRDDLL 435 Query: 303 SPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 + + V D A +WG H Y+++F E PS T+ Sbjct: 436 DDGAPATRVLDVANKWGVRHRSTLINGYRRVFQEAPSETM 475 >UniRef50_Q0S024 Transcriptional regulator, AraC family protein n=2 Tax=Rhodococcus jostii RHA1 RepID=Q0S024_RHOSR Length = 341 Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 56/101 (55%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 ++ A EY+ + + P++ + ++ V R LQ F L P +++ R+ +L Sbjct: 238 INEAVEYITAHAATPLSPELIAREVGVGVRALQRGFREYLDTTPIEFIRNARMKRAHEDL 297 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 ++ +++ TV A +WGF+H G+F+ +Y++++ PS TL Sbjct: 298 MAADAETDTVSGIASRWGFYHYGRFSQEYRRIYGVSPSHTL 338 >UniRef50_A1WJE1 Transcriptional regulator, AraC family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WJE1_VEREI Length = 327 Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 1/104 (0%) Query: 239 RRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVR 298 +R L A +Y+ ++ EP+T+ + N R+L AF P A++++ RL A R Sbjct: 223 QRKLRVAEDYITSHLHEPLTLEAIANACGTGVRSLCAAFREHYQCAPMAYVRQKRLAAAR 282 Query: 299 RELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 EL++ + V D A++ GF HLG+F+ Y+ + E P TL Sbjct: 283 SELMNA-APGAHVTDIALRCGFSHLGRFSLSYRARYGETPLQTL 325 >UniRef50_A1T1Y4 Transcriptional regulator, AraC family n=1 Tax=Mycobacterium vanbaalenii PYR-1 RepID=A1T1Y4_MYCVP Length = 317 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 65/145 (44%) Query: 198 ENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPV 257 N H + V G L G +L A S RLL RA ++ +N + + Sbjct: 171 SNAHAASQPLVTGPLLRYLAGCVLAAFPNTAAAPPRVQDSSPRLLERALAFIDDNADKDI 230 Query: 258 TVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQ 317 ++ D+ V+ +++ F L P +L+++RL+ R+LI+ + TV D A + Sbjct: 231 SLGDIAAAARVTPQSVAAMFRRHLSCTPKEYLRKVRLDHAHRDLIANNPATATVADIAAR 290 Query: 318 WGFWHLGQFATDYQQLFSEKPSLTL 342 WGF + FA Y+ + P TL Sbjct: 291 WGFGVVEAFAVYYRGRYGVHPETTL 315 >UniRef50_B5IIP6 Putative transcriptional regulator n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IIP6_9CHRO Length = 354 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 69/145 (47%), Gaps = 6/145 (4%) Query: 204 AVRKVLGDNLLMAMGAML----EEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTV 259 A R + D + M AML E P+ + H+ R +++ N+SEP+++ Sbjct: 202 ADRLQVDDRIYRLMAAMLLPEVREEGPLDRL-TQKHRQGRDAFDELIDFIRLNLSEPLSL 260 Query: 260 LDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWG 319 L H SRRTLQ AF LG W++ RL+ R+ L P S T+ A + G Sbjct: 261 TMLEEHSHYSRRTLQYAFRERLGCTATQWIRSQRLDLARQHLQHP-SPGDTIASIAARCG 319 Query: 320 FWHLGQFATDYQQLFSEKPSLTLHQ 344 + L F+ ++QQ F KPS L + Sbjct: 320 YRSLSLFSVEFQQRFHVKPSQLLRE 344 >UniRef50_B9QYF5 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QYF5_9RHOB Length = 301 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 10/172 (5%) Query: 180 AALWGFVQQALATFCENPE----NLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISH 235 AA+ F +Q+L P+ Q + L +L + +L P V E Sbjct: 128 AAIDQFFRQSLCKVLSTPDYTTRQYGQVTMPAALEADLYAMIAGVL---APCVFPELKGR 184 Query: 236 QSYRRLLSRAR---EYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRI 292 R L R E++ N ++ DLC + L F +LG P +L+ Sbjct: 185 MGQRSSLKSLRCVSEFIDLNGCANLSTADLCRVAKLEYSRLHAVFDEVLGTSPYKYLQSA 244 Query: 293 RLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 RL+ RR L+ + ++KD A+ G+ G+FA Y+ +F E PS T+ + Sbjct: 245 RLSEARRLLLDDRNPPKSIKDVALSLGYMKSGRFAEQYRDMFDELPSETMAR 296 >UniRef50_C1BBD9 Putative AraC family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1BBD9_RHOOB Length = 336 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 + RA Y+ E+ +E TV ++ + VS R L AF PN +L +RL + EL Sbjct: 231 VGRAEHYMREHAAELPTVSEVAAAVGVSVRALSGAFRRYRETTPNRFLTEVRLQRIHDEL 290 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 I+ + TV A +WG+ ++G FA Y+ F E PS Sbjct: 291 IAA-THECTVSSVAARWGYVNMGVFAAAYRGRFGENPS 327 >UniRef50_Q07S23 Transcriptional regulator, AraC family n=2 Tax=Rhodopseudomonas palustris RepID=Q07S23_RHOP5 Length = 411 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 1/103 (0%) Query: 245 AREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISP 304 A+++V N +P+ + L V+ RTL F G P ++KR+RLN R ++ Sbjct: 281 AKQHVDLNWDQPLNITALAEAAGVNARTLFKHFKQDCGFTPQEYIKRVRLNHA-RAMLQM 339 Query: 305 WSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 +S TV A++ F + G FA DY+ F E+PS TL + R Sbjct: 340 ADKSTTVLGIALKCCFQNQGHFARDYRLAFGERPSETLERERR 382 >UniRef50_Q05092 XylDLEGF operon transcriptional activator 2 n=2 Tax=Pseudomonas RepID=XYLS2_PSEPU Length = 157 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 2/103 (1%) Query: 244 RAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELIS 303 R +++ EN+ +++ L +S R+L F G P +++ +L VR L + Sbjct: 40 RVVQFIEENVKRSISLEQLAELALMSPRSLYTMFEKHTGTTPMNYIRNRKLECVRACLSN 99 Query: 304 PWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS--LTLHQ 344 P + ++ + A+ +GF HLG+FA Y+ F E PS L+LH+ Sbjct: 100 PTTNIRSITEVALDYGFLHLGRFAEKYRSTFGELPSDTLSLHK 142 >UniRef50_C6WK40 Transcriptional regulator, AraC family n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WK40_ACTMD Length = 434 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 3/121 (2%) Query: 224 AQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGI 283 A P+V +H L RA ++ N + D+ VS R +Q AF LG Sbjct: 316 ADPVVEDRRDAHPDA---LRRALAFIDANPDRDLATSDVAAAARVSTRAVQLAFRRHLGT 372 Query: 284 GPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 P A+L+++RL+ R +L S + TV A +WG+ FA Y+ + PS TL Sbjct: 373 TPMAYLRQVRLDHARADLTSATTGQDTVTRIAAKWGYGRASVFAARYRAAYGVSPSQTLR 432 Query: 344 Q 344 + Sbjct: 433 E 433 >UniRef50_B4EDN0 AraC family regulatory protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4EDN0_BURCJ Length = 363 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 1/107 (0%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 L RA E++ + + +T+ ++ S R+L AF A P L +RL VR EL Sbjct: 253 LRRAVEFMEARLGQALTLAEIAEAADCSIRSLSRAFSAFRQTTPMQHLNHLRLEKVRSEL 312 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMRE 348 +S + T+ A+++GF HL F Y++ + E PS T +R R+ Sbjct: 313 LSDADAATTISTIALRYGFGHLSAFNQQYRRRYGETPSQT-RKRARD 358 >UniRef50_A0NVQ0 Transcriptional regulator, AraC family protein n=2 Tax=Labrenzia RepID=A0NVQ0_9RHOB Length = 332 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 4/129 (3%) Query: 216 AMGAMLEEAQPMVTAESISHQSYRR---LLSRAREYVLENMSEPVTVLDLCNQLHVSRRT 272 A+ L E QP + + Q + +L RA + + E ++ +++LD+ S R Sbjct: 198 ALVGTLLEFQPNTVSPLLERQETGKSPAILKRAVKLIGERFADDISLLDISTHAQTSPRN 257 Query: 273 LQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQ 332 LQ F G P +L+ +RL+ R L+S +S+ V + A + G HLG+F+ Y++ Sbjct: 258 LQLQFRQEFGCSPLQYLQNVRLSYARHLLLSE-GRSLPVAEVAYRSGHRHLGRFSVAYRE 316 Query: 333 LFSEKPSLT 341 F E P T Sbjct: 317 RFGETPGAT 325 >UniRef50_A4EX82 Transcriptional regulator, AraC family protein n=2 Tax=Roseobacter RepID=A4EX82_9RHOB Length = 358 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 10/122 (8%) Query: 221 LEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAI 280 L E +P +++ HQ L RA+E++ N++EP+T+ ++ S R+LQ F Sbjct: 241 LREERP----DALPHQ-----LRRAQEFINSNLTEPLTLAEISKAAGCSLRSLQVGFRKH 291 Query: 281 LGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSL 340 G+ P +L RLN L+ + + V A GF HLG+F+ Y++ F P Sbjct: 292 FGVTPMGYLNCQRLNHAHY-LLQSRTGARRVSTVAFDAGFSHLGRFSIAYRKAFGCSPKE 350 Query: 341 TL 342 TL Sbjct: 351 TL 352 >UniRef50_Q5LPA0 Transcriptional regulator, AraC family n=1 Tax=Ruegeria pomeroyi RepID=Q5LPA0_SILPO Length = 348 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 1/103 (0%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 + RAR+++ ++++P+T+ + S R LQ F +L + P A+L+ +RLN R L Sbjct: 243 VRRARDFMQAHLADPLTLSQIAAAAGTSPRNLQLGFSQLLEMTPLAYLRVLRLNYA-RYL 301 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 + +T+ A GF HLG+F+ Y F E PS T Q Sbjct: 302 LRESPPQVTIASIAGAAGFSHLGRFSAQYAARFGEGPSQTRKQ 344 >UniRef50_A3NKW1 HrpB n=22 Tax=Burkholderia pseudomallei RepID=A3NKW1_BURP6 Length = 483 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 2/101 (1%) Query: 244 RAREYVLENMSEP-VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELI 302 RA Y+L+N++ ++V ++ ++ V+ R LQNAF LG+ P ++ R+ +R EL+ Sbjct: 381 RAYHYILQNLNRSDLSVREIAAEIGVTERALQNAFKIYLGLSPRELIRSRRMERIRTELV 440 Query: 303 S-PWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 + VK+AA +WG + Y++ + E PS TL Sbjct: 441 DFTLTGERNVKEAARKWGVQNGSTLVIAYRKEYDETPSETL 481 >UniRef50_C5ALL5 HrpB n=5 Tax=Burkholderia RepID=C5ALL5_BURGB Length = 480 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 9/125 (7%) Query: 225 QPMVTAESISHQ---SYRRLLSRAREYVLENMSEP-VTVLDLCNQLHVSRRTLQNAFHAI 280 QP + +S + YRR A YVL+N+ ++V ++ Q+ V+ R LQ+AF + Sbjct: 360 QPKAAPDDVSARLPAKYRR----AYRYVLDNLDRADLSVREIATQIGVTERALQSAFKSC 415 Query: 281 LGIGPNAWLKRIRLNAVRRELIS-PWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 LG+ P+ ++ R+ +R LI + V + A +WG T Y++ F E PS Sbjct: 416 LGLSPSELIRTRRMERIREALIDHADAGDQRVLETARRWGVQSRSTLVTGYRKQFREAPS 475 Query: 340 LTLHQ 344 TL + Sbjct: 476 ETLER 480 >UniRef50_A1ULB3 Transcriptional regulator, AraC family n=3 Tax=Mycobacterium RepID=A1ULB3_MYCSK Length = 348 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 55/102 (53%) Query: 241 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE 300 LL RA ++ EN++ + + D+ +HVS R +Q F L P +L+R RL+ + Sbjct: 245 LLQRAIGFIEENLANDIALADIAAAVHVSPRAVQYMFRRHLETTPLQYLRRSRLHHAHMD 304 Query: 301 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 L++ TV A QWGF H G+FA Y++ + + P TL Sbjct: 305 LLAADPARETVTRIAAQWGFAHTGRFAVMYREAYGQSPHTTL 346 >UniRef50_A1K6W1 Putative AraC-family transcriptional regulator n=4 Tax=Proteobacteria RepID=A1K6W1_AZOSB Length = 341 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/102 (37%), Positives = 51/102 (50%) Query: 241 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE 300 + R Y+ +N EP+T++DL VS R+L F P L+ +RL VR Sbjct: 237 FVKRVERYIEDNAHEPLTIVDLAAHAGVSSRSLFAGFKRYRDTTPMLHLREVRLRRVREA 296 Query: 301 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 L+ TV AM+WGF HLG F Y++ F E PS TL Sbjct: 297 LLEGRPGQTTVTSEAMRWGFSHLGHFTAAYKRRFGESPSETL 338 >UniRef50_Q47CB9 Transcriptional regulator, AraC family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47CB9_DECAR Length = 321 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 4/121 (3%) Query: 228 VTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNA 287 +T S+ S+ RL+ +Y+ N+ +T +L H+S R+L F P Sbjct: 204 LTPPSLQSVSFDRLV----KYIENNIKRDITAEELAQYSHLSLRSLYLLFEKNAKTTPKN 259 Query: 288 WLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 ++++ +L V LI+P S V A+++GF HLG+F+ Y+ F PS T+ R + Sbjct: 260 FIRQKKLEQVYSTLINPTSHVANVTAVALEYGFTHLGRFSELYKSNFGVLPSETIRSRQK 319 Query: 348 E 348 + Sbjct: 320 Q 320 >UniRef50_Q0SCE6 Transcriptional regulator, AraC family protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SCE6_RHOSR Length = 306 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 19/196 (9%) Query: 154 NFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNL 213 +F+ P+ + L + +V+ A L FV A+A + P+ +LGD Sbjct: 122 SFVLTPNEIRECL--ERTYDVRAGSGALLEHFVTTAVAEGADV-----DPSAATLLGDAG 174 Query: 214 LMAMGAMLE--EAQPMVTAESISHQSYRRLLSRAREYVLENMSEP-VTVLDLCNQLHVSR 270 + + A+L E +P + ++ Q R +V N+++P ++V + + LH+S Sbjct: 175 MSLVSAVLTAPETRPAPPSSAVRDQILR--------HVRRNLADPALSVGSIASALHMSP 226 Query: 271 RTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDY 330 RTLQ F A G +A ++R RL +V R+L +P T+ A ++GF+ F + Sbjct: 227 RTLQRIF-ADYGHTLSAVIRRERLASVHRDLTNPNLHDRTISSLASRYGFYDAPAFTRAF 285 Query: 331 QQLFSEKPSLTLHQRM 346 + + PS HQ + Sbjct: 286 RAEYGMTPSDARHQAL 301 >UniRef50_A6T9P9 Positive regulator for rhaBAD operon n=3 Tax=Klebsiella RepID=A6T9P9_KLEP7 Length = 274 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 8/189 (4%) Query: 154 NFLHNPDRVLHMLRN-QSALEVKEQHKAALWGFVQQALATFC-ENPENLHQPAVRKVLGD 211 N L NP L+ + L+ +AA +G++ ++C E E + PA+R D Sbjct: 83 NVLINPAVAFGYLQQMEGLLQQLSAQRAACYGWLAPETRSYCRELVEKIFSPALRA--AD 140 Query: 212 NLLMAMGAMLEEAQPMVTAES-ISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSR 270 N + + ++TAES + S R L + ++ E+ E L Q H++ Sbjct: 141 NTPLRESLFFQLVTTILTAESEAEYSSTRYKLHKLLTWLQEHCFEEHNWQQLAEQFHLTT 200 Query: 271 RTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDY 330 RT G+ P+ +LKR+RL + R +L MT+ + A GF + F T Y Sbjct: 201 RTAFRHIKEATGLTPDNYLKRLRLVSARVKL---RETEMTITEVAYLCGFANSNHFTTLY 257 Query: 331 QQLFSEKPS 339 +++F PS Sbjct: 258 KKVFGLTPS 266 >UniRef50_A3PVV2 Helix-turn-helix-domain containing protein, AraC type n=3 Tax=Mycobacterium RepID=A3PVV2_MYCSJ Length = 318 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 7/165 (4%) Query: 180 AALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQS-- 237 AA W + + ++P+ A VLG M + A + E P+ H Sbjct: 156 AAKWVATLETVERLLDDPDT----ANPIVLGKAGRM-LAARVLEIFPVTRTPGTEHPGRL 210 Query: 238 YRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAV 297 L RA Y+ +N + + V D+ + ++ + F LG+GP L+RIRL+ Sbjct: 211 VPNFLRRAIAYMEDNATADIGVADIAAAVELTPDGVTYLFRRHLGVGPLDHLRRIRLDHA 270 Query: 298 RRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 R+L+ +S TV A +WGF HL F Y + + P TL Sbjct: 271 HRDLLDHDPESTTVFSIAARWGFPHLPSFEELYCGSYGQNPQDTL 315 >UniRef50_A3K5U5 Helix-turn-helix, AraC type n=4 Tax=Rhodobacteraceae RepID=A3K5U5_9RHOB Length = 340 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 50/106 (47%), Gaps = 4/106 (3%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 + RA E + E + D+ ++ VS RTL F G P +L RL+ +R EL Sbjct: 231 VRRAEEILEAEAREAPVIGDVARRVGVSARTLSGGFQRFRGQSPREFLAGRRLDGLRAEL 290 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 S +V D A WGF +LG A Y++ F E PS H R R Sbjct: 291 ESA-DADRSVSDIASDWGFVNLGALAGRYRERFGELPS---HTRAR 332 >UniRef50_Q0K6C4 Transcriptional regulator, AraC-family n=3 Tax=Cupriavidus RepID=Q0K6C4_RALEH Length = 361 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 52/103 (50%) Query: 248 YVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQ 307 Y+ N+ +P+T+ + VS RTLQ F P +L+ +RL+ R +L Q Sbjct: 259 YLRANLEQPLTLEQIAAHCGVSARTLQLGFRKSKNTTPMEYLRLLRLHGARADLQRARQQ 318 Query: 308 SMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 V A++ GF HL F+ +Y++ F E PS TL ++ G Sbjct: 319 KGMVSAIALRHGFTHLSLFSREYRREFGELPSQTLRAAAQQGG 361 >UniRef50_B3QH76 Transcriptional regulator, AraC family n=3 Tax=Rhodopseudomonas palustris RepID=B3QH76_RHOPT Length = 340 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 2/105 (1%) Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 R + A YV + E +++ D+ VS TL AF G P+A++KR++LN +R Sbjct: 226 RYVRTAEHYVESHRDEDISIEDVARIAGVSISTLTRAFLKHRGCSPSAYVKRVKLNHAKR 285 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 L + + T+ A++ GF + +F+ DY++ F E P+ TL + Sbjct: 286 LLET--GAATTLIGVALRCGFANPSRFSQDYREAFGESPTETLRR 328 >UniRef50_Q3BW17 AraC-type transcriptional regulator HrpX n=54 Tax=Xanthomonas RepID=Q3BW17_XANC5 Length = 476 Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 9/129 (6%) Query: 220 MLEEAQPMVTAESISHQ---SYRRLLSRAREYVLENM-SEPVTVLDLCNQLHVSRRTLQN 275 +LE P ++ IS + YRR S Y++ N +++ ++ Q+ V+ R LQ Sbjct: 353 LLESGTPAHVSDDISARLPAKYRRAYS----YMITNAHRSDLSINEVAAQIGVTGRALQQ 408 Query: 276 AFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFS 335 AF + G+ P L+R R+ ++R EL++ +V AA +WG A Y+Q F+ Sbjct: 409 AFKSATGLSPTQVLRRYRMQSIRDELLAEGG-CGSVLQAASRWGVGSRSALAKGYRQHFN 467 Query: 336 EKPSLTLHQ 344 E P TL + Sbjct: 468 EAPMETLQR 476 >UniRef50_Q89JG6 Blr5317 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89JG6_BRAJA Length = 320 Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 48/145 (33%), Positives = 70/145 (48%), Gaps = 9/145 (6%) Query: 209 LGDNLLMAMGAMLE-EAQPMVTAESISHQSYR--RLLSRAREYVLENMSEPVTVLDLCNQ 265 L + LL+A+ + +A+P S S Q R +L+ EYV + P+ DL + Sbjct: 178 LQEGLLLALDDLFRIDARP---ERSTSVQGGRSAKLVQWIDEYVAAYPTAPIYTADLAGE 234 Query: 266 LHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQ 325 VS RTL A + G+ + +++ RL A R L+ TV A GF H+G+ Sbjct: 235 FGVSIRTLGGAVSKVRGMSLHQYIRLKRLWATRARLLK--GGGATVATCARAQGFHHMGE 292 Query: 326 FATDYQQLFSEKPSLTLHQRMREWG 350 FA Y+ F E PS TL R R+ G Sbjct: 293 FAAAYRATFHEAPSDTL-ARGRQIG 316 >UniRef50_B1YXB0 Transcriptional regulator, AraC family n=2 Tax=Burkholderia ambifaria RepID=B1YXB0_BURA4 Length = 339 Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 3/116 (2%) Query: 230 AESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWL 289 AES S R++ E++ + P+++ DL VS R+L G P L Sbjct: 224 AESGSRGGIRQM-DALHEFIHARLCAPISLEDLAKAAGVSLRSLNVLCRRYHGATPMELL 282 Query: 290 KRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 + IRL+A R +L++ Q+ ++ D A+ +GF HLG+F+ Y F E P T R Sbjct: 283 RNIRLDAARAQLLT--DQTASITDTALTFGFGHLGRFSAYYFARFKELPRDTQKAR 336 >UniRef50_UPI0001B53BB4 transcriptional regulator, AraC family protein n=1 Tax=Streptomyces sp. C RepID=UPI0001B53BB4 Length = 320 Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 48/97 (49%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 + RA ++ P+ + ++ V+ R LQ AF LG P A+L+R+RL +L Sbjct: 223 VRRAVAFIESQPDAPIGLAEIAAAAAVTPRALQYAFRRHLGTTPTAYLRRVRLALAHADL 282 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKP 338 ++ TV A +WGF H G+F+ Y+ + P Sbjct: 283 VAADPARDTVTAIANRWGFHHQGRFSAAYRAAYGGPP 319 >UniRef50_Q1ZAE3 Putative uncharacterized protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1ZAE3_PHOPR Length = 304 Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 2/87 (2%) Query: 258 TVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQ 317 ++ + + L VS RTL N F+ +G+ P + I+L A+R L++ S S+T DAA+ Sbjct: 220 SINSIASTLGVSTRTLNNMFYERVGLAPKQYAMLIKLYALRDILLNKESYSIT--DAALA 277 Query: 318 WGFWHLGQFATDYQQLFSEKPSLTLHQ 344 LG+F+ Y+ LF E PS TL + Sbjct: 278 LNITDLGRFSARYKSLFGEYPSDTLKR 304 >UniRef50_A3K773 Transcriptional regulator, AraC family protein n=1 Tax=Sagittula stellata E-37 RepID=A3K773_9RHOB Length = 321 Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 1/100 (1%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 + RA +Y+ N+ +TV D+ + L +S R+LQ +F A LG+ P +L+ RL + Sbjct: 218 VRRAMQYIHRNLGAAMTVGDIADALGISPRSLQLSFKAELGMTPMQYLRDARLREA-HAM 276 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 + S ++ D G H G+F+ +Y++ + E P T Sbjct: 277 LKTGSDMGSIGDICEHVGIAHCGRFSVEYKRRYGESPHET 316 >UniRef50_B9KUI9 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Rhodobacter sphaeroides KD131 RepID=B9KUI9_RHOSK Length = 307 Score = 57.4 bits (137), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 3/106 (2%) Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 R +++A + + +EP+++ L L S R+LQ AF P L IRL+A R Sbjct: 204 RRVAQAIALMRDAHAEPLSIAALARNLGCSSRSLQTAFRDAGHPAPREVLAAIRLDAARV 263 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 L+ S V A+ G HLG+FA Y+Q F E P+ TL + Sbjct: 264 RLL---SGDGNVTGCALDSGITHLGRFAQAYRQRFGEHPADTLGSK 306 >UniRef50_Q0SDR9 Transcriptional regulator, AraC family protein n=7 Tax=Corynebacterineae RepID=Q0SDR9_RHOSR Length = 315 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 1/106 (0%) Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 R++ R + + ++ + P + ++ + VS R +Q F +G+ P +L +RL V Sbjct: 209 RIVKRVIDAIQQDPAHPWSAGEMAELVGVSVRRMQQGFREYVGMTPMEYLVDVRLERVHA 268 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 EL S T+ + A +WG H G+FA Y++ + PS +L R Sbjct: 269 ELTGSGS-CATISEVATRWGIMHTGRFAAAYRRKYGVTPSESLRDR 313 >UniRef50_Q4KE48 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria RepID=Q4KE48_PSEF5 Length = 323 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 4/100 (4%) Query: 251 ENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMT 310 +N ++P+ V DL + H+S T + F AI+G+ P + K++RL R+ ++ SQ++ Sbjct: 228 QNFTQPLRVDDLAQRAHMSPSTFRQHFRAIIGVSPLQFHKQLRLQEARQLML---SQNID 284 Query: 311 VKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 AA G+ QF+ +Y ++F P + +RMRE G Sbjct: 285 AGRAAGLVGYESASQFSREYSRVFGAPPQRDI-RRMREAG 323 >UniRef50_B9K3F5 Transcriptional regulator AraC family n=1 Tax=Agrobacterium vitis S4 RepID=B9K3F5_AGRVS Length = 323 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 1/108 (0%) Query: 234 SHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIR 293 + Q R+L A +Y+ N++ P+TV ++ VS R+LQ AF GI P ++ R Sbjct: 214 ADQVNNRVLRNALDYIEANLASPITVSEIAFAAGVSVRSLQIAFRESKGITPVQYIIECR 273 Query: 294 LNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 L+ V L ++ + A WGF H F+ Y++ F E P T Sbjct: 274 LDRVHDALKRGFAPGY-ISQIANAWGFQHHADFSRRYRKRFGETPKQT 320 >UniRef50_C3MHY3 Putative transcriptional regulator, AraC family n=1 Tax=Rhizobium sp. NGR234 RepID=C3MHY3_RHISN Length = 313 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 15/124 (12%) Query: 227 MVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPN 286 M TAES HQ + RA ++ E+ S P+ + DL +++ +S +L + F AI + P Sbjct: 185 MTTAESQPHQ-----IGRAVAWLKEHYSRPLRIDDLASRVSMSVSSLHHHFKAITAMSPL 239 Query: 287 AWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 + K++RL RR ++ + + DA Q G+ QF+ +Y + F E P M Sbjct: 240 QYQKQLRLQEARRLML---EERLDAGDAGHQVGYDSQSQFSREYARHFGEPP-------M 289 Query: 347 REWG 350 R+ G Sbjct: 290 RDIG 293 >UniRef50_B9TJI8 Regulatory protein hrpB, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TJI8_RICCO Length = 282 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 22/159 (13%) Query: 200 LHQPAVRKVLGDNLLMAMGAMLEEAQ----PMVTAESISHQS----------YRRLLSRA 245 LH+ A ++ +AM + EEAQ + A+ IS Q YRR S Sbjct: 128 LHESA--RLYNRYAFVAMQCLREEAQLPTRILKHADKISAQRDDVGTRLPARYRRAYS-- 183 Query: 246 REYVLENMSEP-VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELIS- 303 ++++N+ P ++V ++ +++ V+ R LQ+ F LG+ P+ ++R R+ +R EL+ Sbjct: 184 --FIVDNLERPDLSVCEVADEIGVTERALQSTFKRFLGLSPSEVIRRQRMERIRAELMEH 241 Query: 304 PWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 P + ++ A +WG H +++ F E P+ L Sbjct: 242 PDGSNASLLGVANRWGVQHRSTLTNGWRKQFHEAPTEIL 280 >UniRef50_A5V473 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V473_SPHWW Length = 358 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 1/102 (0%) Query: 241 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE 300 + RA +++ ++ + + + D+ V RTL + F +G P WL+ RL + R + Sbjct: 237 FVRRAEQFIARHLKDDIQLSDIVEAAGVPARTLYHGFERFMGHSPMRWLRLRRLESARAD 296 Query: 301 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 +I+ + ++V A Q+ H G+FA Y++++ E PS TL Sbjct: 297 IIASDGE-ISVTALANQYWIGHGGRFANMYREIYGEPPSATL 337 >UniRef50_B3SEQ8 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3SEQ8_TRIAD Length = 240 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 4/101 (3%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 +S+A Y+ N+ + + V +L N ++S+ T NAF ++ + PN ++K I+L + L Sbjct: 142 VSKAVNYIHANLDKSIQVEELANLSNMSKTTFFNAFKRLMHLPPNQYIKGIKLQRAQALL 201 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 Q M +A+ G+ QF+ +Y++ F PS TL Sbjct: 202 ----KQGMQANEASYHVGYSSFSQFSREYKRFFGFSPSQTL 238 >UniRef50_A5EL73 Transcriptional regulator, AraC family n=2 Tax=Bradyrhizobium RepID=A5EL73_BRASB Length = 349 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 1/107 (0%) Query: 241 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE 300 L+ R +Y+ N EP+T+ L + VS R++ F + G P A+ K +RL E Sbjct: 243 LVKRLEDYIEANWREPITIERLVREAGVSARSIFRVFERVRGYSPIAFAKSVRLRRA-HE 301 Query: 301 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 ++ S+TV AA F + G FA Y+ F E PS+T+ + R Sbjct: 302 MLRSGDPSVTVAAAAAACNFANPGHFARYYRATFGELPSVTMARAER 348 >UniRef50_A6B9E2 Transcriptional regulator, AraC family n=5 Tax=Gammaproteobacteria RepID=A6B9E2_VIBPA Length = 307 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 89/174 (51%), Gaps = 16/174 (9%) Query: 169 QSALEVKEQHKAALWGFVQQALATFCENPENLH--QPAVRKVLGDNLLMA-MGAMLEEAQ 225 Q + V E ++ L FV+ LA +N+ P +++ + LLM+ G L + Sbjct: 136 QKGIAVGELSESLLDAFVR--LAELLNEGQNIKILAPIIKREIFYRLLMSEQGTRLHQ-- 191 Query: 226 PMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGP 285 +VTA S SHQ +++A +++ N +P++V DL + +S+ + F ++ + P Sbjct: 192 -IVTAGSHSHQ-----IAKAIDWLKNNFVKPLSVGDLASYTGMSKSSFYTHFRSMTSMTP 245 Query: 286 NAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 + K++RL+ RR +++ +++ A + G+ QF+ +Y +LF PS Sbjct: 246 LQFQKKLRLSEARRLMLT---ENLDAMAATFKVGYESPSQFSREYSRLFGAPPS 296 >UniRef50_Q89FI3 Transcriptional regulatory protein n=3 Tax=Bradyrhizobium RepID=Q89FI3_BRAJA Length = 341 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 3/117 (2%) Query: 232 SISHQSYR--RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWL 289 + S Q+ R R L AR+ + +N EP+ + L + R LQ F G+ + L Sbjct: 225 TFSGQAERLPRALRVARDRLADNAGEPLDLAQLACAAGIGIRALQLGFRRHFGVSISEML 284 Query: 290 KRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 +RL + L + ++ + A GF HLG+ A Y++ F E PS TL +RM Sbjct: 285 LDMRLAGLHARLAQARPDA-SITEIAFDLGFTHLGRMAGAYREKFGETPSATLRRRM 340 >UniRef50_Q0I7Z5 Transcriptional regulator, araC family domain protein n=5 Tax=Synechococcus RepID=Q0I7Z5_SYNS3 Length = 318 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 4/99 (4%) Query: 250 LENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELI----SPW 305 L+ MS P+++ D+C L+ + +L G+G + ++RL RR +I + Sbjct: 216 LDKMSSPLSLSDVCKLLNSGQASLYRVCQDYFGMGIIEMMTQVRLEEARRAMIFQSTTSS 275 Query: 306 SQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 + T+++ A+++GF H G+F+ Y F E PS TL + Sbjct: 276 CDNNTIREIAIRYGFKHQGRFSRRYFTSFGELPSQTLRR 314 >UniRef50_Q6FBB1 Putative transcriptional regulator (AraC family) n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FBB1_ACIAD Length = 218 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 2/105 (1%) Query: 245 AREYVLENMSE-PVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELIS 303 A +Y+ N+ + P+ + ++ +VS RTL + F I P+ +++ +RL VR EL++ Sbjct: 115 AEQYIRNNIRQSPLKIEEIAAYANVSIRTLSSGFRKYRNISPSLFIRDLRLEMVREELLN 174 Query: 304 PWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMRE 348 ++ + A G+ +LG F Y+Q F E PS TL +E Sbjct: 175 AGG-GKSIAEIAYASGYLNLGTFIRLYKQKFRELPSTTLRCYFKE 218 >UniRef50_Q5HR73 Transcriptional regulator, AraC family n=7 Tax=Staphylococcus RepID=Q5HR73_STAEQ Length = 724 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 58/263 (22%), Positives = 112/263 (42%), Gaps = 30/263 (11%) Query: 78 REYTGLALRQSCLV-WPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDD 136 +EYT + L+ WP I + Q F+ + L S E+ F +S D+ Sbjct: 12 KEYTATRCQDGILLFWP------IEGSMHFQQFMKERIL-SDELYIVNNMDVFSIS--DN 62 Query: 137 YTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCEN 196 L V +S D T N + ++ QS E+KE V Q F +N Sbjct: 63 GITLEVYISSDWFTELGYSFFNYHYISDLI--QSKKEIKE--------LVAQLTLNFLDN 112 Query: 197 PENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEP 256 + Q + K++ ++A A++++ AE Y L Y+ ++ E Sbjct: 113 DVDKEQDIINKIVH---ILANEAIIDKK----IAEDQYMYDYYGELKDELNYIYNHIEER 165 Query: 257 VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAM 316 +T+ D+ N+L+VS+ L FH +LG+G ++ ++++ L++ + T+ + Sbjct: 166 LTLKDISNKLYVSKSNLSTQFHLLLGMGFKKYIDTLKISKSIEMLLTT---TKTISQISE 222 Query: 317 QWGFWHLGQFATDYQQLFSEKPS 339 GF ++ ++ ++ S P+ Sbjct: 223 TLGFSNVSTYSRQFKNYLSVTPN 245 >UniRef50_A3VW30 Transcriptional regulator, AraC family protein n=3 Tax=Roseovarius RepID=A3VW30_9RHOB Length = 337 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 5/131 (3%) Query: 209 LGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHV 268 +G +LL+ QP A + H+ Y + +S A + +N+SEP+++ ++ +Q+ Sbjct: 195 IGRHLLLPSIRTSSSTQPF--APAAFHKFYDKAVSDALAIMEDNLSEPLSITEIADQVDT 252 Query: 269 SRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFAT 328 S+R L+ F A+ P + K++R VRR + + D A GF G +T Sbjct: 253 SQRCLERRFRAVFETSPGHYYKQLR---VRRAHHLIQDTKLPLIDIATATGFGSTGTLST 309 Query: 329 DYQQLFSEKPS 339 +++ + PS Sbjct: 310 AFKKFYGLTPS 320 >UniRef50_Q2IVS4 Transcriptional regulator, AraC family n=2 Tax=Rhodopseudomonas palustris RepID=Q2IVS4_RHOP2 Length = 336 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 3/105 (2%) Query: 242 LSRAREYVLENMSEP-VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE 300 L R E+ +E+ E +V D+ VS TL F G P A++KR +L R+ Sbjct: 230 LVRIAEHYIESRCESDASVDDIARACAVSVSTLTRMFMKYRGYSPAAFIKRAKLARARQL 289 Query: 301 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 L S + TV A++ GF + +FA DY++ F E P+ TL +R Sbjct: 290 LES--RAASTVVGVALRCGFANPSRFAKDYREAFGESPTETLRRR 332 >UniRef50_A4CW16 Transcriptional regulator, AraC family protein n=2 Tax=Synechococcus RepID=A4CW16_SYNPV Length = 339 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 4/95 (4%) Query: 254 SEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAV----RRELISPWSQSM 309 +E +T+ D+ QL SRRTL +GP LK IRL V R + + Sbjct: 242 NEDLTLDDISKQLFCSRRTLIQGTKDTFEMGPMELLKTIRLEQVNWMLRNKDARAEAALQ 301 Query: 310 TVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 V D A + F+ G FA YQ LF E PS TL + Sbjct: 302 NVSDIAKHFNFYSRGHFARAYQNLFHENPSQTLQE 336 >UniRef50_Q0SE50 Transcriptional regulator, AraC family protein n=8 Tax=Nocardiaceae RepID=Q0SE50_RHOSR Length = 315 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 59/257 (22%), Positives = 110/257 (42%), Gaps = 22/257 (8%) Query: 92 WPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPG-GTEFELSTP-------DDYTILGVV 143 +P+++ IP + + C + +RPG T F P D ++LGV Sbjct: 67 YPDAYEINIPLSGSLE-----SCSQGDTVLSRPGQATVFRADEPTLITRWSGDCSVLGVK 121 Query: 144 LSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQP 203 + ++A+ + D + L S +++ E + + V+ A E + L P Sbjct: 122 FDSAYLEQEADRILGSD-LRPGLHLPSQIDLTEAPGHSWFRLVRSLTAQLREPADLLANP 180 Query: 204 AVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYR-RLLSRAREYVLENMSEPVTVLDL 262 V+G L A+ + A + E + + R R++ R + + ++ + T D+ Sbjct: 181 ----VVGPQLAGAITSAFILA--VTPDEEVRGGAPRPRIVKRVLDGLNDDPARAWTAADM 234 Query: 263 CNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWH 322 S R LQ F +G P+ L IRL+ +L + +TV + A +WGF H Sbjct: 235 AELAGTSVRRLQEGFREYVGRSPSECLLDIRLSRADADLRA-LEPGVTVSEVAARWGFTH 293 Query: 323 LGQFATDYQQLFSEKPS 339 G+F+ Y++ + + PS Sbjct: 294 AGRFSAAYRRRYGKSPS 310 >UniRef50_A9IG97 Transcriptional regulator, AraC family n=4 Tax=Proteobacteria RepID=A9IG97_BORPD Length = 327 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 2/99 (2%) Query: 247 EYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWS 306 +Y+ E + P+ + DL VS R LQ + P L+ +RL+AV L Sbjct: 226 DYMRERLGAPIGLADLSGAAGVSARVLQQTCQRHRQMSPMELLRDMRLDAVHAWLSE--H 283 Query: 307 QSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 S + + A+ +GF HLG+FA Y+Q F E P T +R Sbjct: 284 PSANITETALFYGFGHLGRFAAYYRQRFGESPHQTAQRR 322 >UniRef50_B8H6K6 Transcriptional regulator, AraC family n=2 Tax=Actinomycetales RepID=B8H6K6_ARTCA Length = 321 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 6/167 (3%) Query: 174 VKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESI 233 V+ + L G V Q + N + L+ P+ + L N L + ML A+ ++ + + Sbjct: 154 VRMAGDSGLSGIVGQFIRQLSGNLDVLNGPSGSR-LAANALDLVSTMLH-AEMDISPDRM 211 Query: 234 SHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLH-VSRRTLQNAFHAILGIGPNAWLKRI 292 Q+ L REY+ N+S+P+ H +S R L N FH G W++ Sbjct: 212 KPQAL--LAVAVREYIDANLSDPLLSPASIAAAHFISTRHLHNVFHES-GTTVAGWIRTQ 268 Query: 293 RLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 RL R+L P + V A +WGF F+ ++ F PS Sbjct: 269 RLEGAGRDLRDPLHAGLPVGAVAARWGFLDAAHFSRTFRDAFGVPPS 315 >UniRef50_A5KJJ5 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KJJ5_9FIRM Length = 398 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 3/99 (3%) Query: 241 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE 300 LLS Y+ + ++EP+T+ D+C++ +SR +LQ F L P +L I+L +E Sbjct: 287 LLSEILAYMNKRLTEPLTIEDICHEFFISRSSLQALFKTHLNTSPKNYLLNIKLQK-SKE 345 Query: 301 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 LI T+ + A + GF + F+ +++ F+ PS Sbjct: 346 LIR--ENQYTISEIAYRLGFSSIHYFSRLFKKYFNTTPS 382 >UniRef50_B3CIZ6 Sensor protein n=2 Tax=Bacteroides RepID=B3CIZ6_9BACE Length = 1346 Score = 54.7 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 4/107 (3%) Query: 234 SHQSYRRLLSRAREYVLENMSEP-VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRI 292 S Q + L A + ENM+ P ++ D C L +SR ++ N + G GPN +++ + Sbjct: 1241 SSQLDKEFLDSAMAAIDENMTNPEFSINDFCRALGMSRTSVYNKIKTLTGQGPNDFIRIV 1300 Query: 293 RLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 RLN + L+ SQ +V + A GF F+T +++ F PS Sbjct: 1301 RLNKSKELLL---SQKYSVGEVACMVGFSDPKYFSTCFKKQFGTSPS 1344 >UniRef50_D0CKC8 AraC-type DNA-binding domain-containing protein n=1 Tax=Synechococcus sp. WH 8109 RepID=D0CKC8_9SYNE Length = 321 Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 55/101 (54%), Gaps = 4/101 (3%) Query: 251 ENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQS-- 308 + M P+++L++C ++ S+ +L G+G + +IRL RR +++ ++ Sbjct: 216 KTMESPLSLLEVCKYINTSQASLYRICQEYFGMGIIELMTQIRLEESRRIMLNQDARRKL 275 Query: 309 --MTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 +++D A+++GF H G++A Y F E PS T+ + R Sbjct: 276 NLYSIRDIAIKYGFKHQGRYARRYYTAFGELPSQTIEKSRR 316 >UniRef50_C9PGF5 Transcriptional regulator AraC family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PGF5_VIBFU Length = 258 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 47/145 (32%), Positives = 74/145 (51%), Gaps = 11/145 (7%) Query: 207 KVLGDNLLMAMGAMLEEAQPMVTAES--ISHQSYRRLLSRAREYVLENMSEP-VTVLDLC 263 +V GD +L A+ ML A + E+ + + R L+ A+ Y+ + + +P ++V+ + Sbjct: 119 EVFGDQMLRAILMMLGTAFQAASGEASALVQRDKRNNLALAQHYIEQQLGDPALSVVSIS 178 Query: 264 NQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHL 323 + LH+S RTL F A W+ RL A RR L++ Q M + D A Q GF +L Sbjct: 179 SHLHMSARTLSRLF-AKQNTSVMRWVWLQRLKACRRMLLT--HQEMAISDIAYQQGFSNL 235 Query: 324 GQFATDYQQLFSEKPSLTLHQRMRE 348 F +LF EK +T Q MR+ Sbjct: 236 PHF----NKLFKEKYGMTPSQ-MRD 255 >UniRef50_Q3AVD9 Transcriptional regulator, AraC family n=2 Tax=Synechococcus RepID=Q3AVD9_SYNS9 Length = 350 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 28/231 (12%) Query: 120 IATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHK 179 +TR + F++S P +T + + ++ + + +H +++ L ++L+++ +H Sbjct: 114 FSTRLKDSYFQMS-PGAHTTMAIFKTQRL--QDLAQIHGEQKLVDCLDRHNSLQLQPEHF 170 Query: 180 AALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESI----SH 235 L +Q P N H V + ++L+ GA+LE P V S +H Sbjct: 171 NQLKTLLQ---------PNN-HTNGVSQ---ESLIE--GALLECFHPEVFLGSSNGEPTH 215 Query: 236 QSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLN 295 Q+ +L+ + LEN + + + DL + SR +L + G+GP +K IRL Sbjct: 216 QA--QLMREMLLWGLENPNNAIKLDDLSATIFASRSSLVQNCRSTFGLGPMTLMKNIRLG 273 Query: 296 AVRRELISPWSQ----SMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 V L P + TV+ + +GF FA DY+ F E PS TL Sbjct: 274 QVHLALSHPEIRHNMGHHTVRSISSHYGFQSRNHFARDYRLFFGESPSATL 324 >UniRef50_Q6W1W1 Probable AraC family transcriptional regulatory protein n=2 Tax=Rhizobium RepID=Q6W1W1_RHISN Length = 343 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 58/102 (56%), Gaps = 1/102 (0%) Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 R + RA E++ N+S P+T+ + VS R L+ F A P A+L R+RL A R+ Sbjct: 225 RHVRRAIEFMQANISRPITMPMVAEAAGVSVRALETGFRAFRDTTPAAYLLRLRLRAARQ 284 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 +L+ P + ++ ++WGF+H G+F+ Y+ + E PS T Sbjct: 285 DLLDP-DNNQPMRKICLKWGFFHFGRFSAVYRSTYGENPSDT 325 >UniRef50_Q2SKP6 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SKP6_HAHCH Length = 343 Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 3/98 (3%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 L A + + N+ EP+T D+ L +SRR L+ F L P+ + +IRL R L Sbjct: 242 LCDAVQLMENNIEEPLTTDDIAKHLEISRRQLERLFKRYLDSVPSRYYLQIRLEKARDML 301 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 S +M++ D ++ GF F+T Y+ L+ PS Sbjct: 302 C---SSAMSITDIGLKTGFSSGAHFSTAYRNLYGLTPS 336 >UniRef50_Q9EWL0 Putative transcriptional regulator n=2 Tax=Streptomyces RepID=Q9EWL0_STRCO Length = 313 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 12/137 (8%) Query: 204 AVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEP-VTVLDL 262 A R L + A G L++ +P+++ L AR+ +++P ++ L Sbjct: 175 AARSTLAELARAAAGGGLDDVEPLLSPA---------LAQAARDLADRRLTDPALSPSAL 225 Query: 263 CNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWH 322 +L+VS RTLQ AF A G +++++R RL R L++P + MTV + A +W F Sbjct: 226 ARELNVSPRTLQRAF-AREGRPLSSYIRRRRLEEACRALVAP-HRRMTVTEIAARWQFAD 283 Query: 323 LGQFATDYQQLFSEKPS 339 G FA +++ + P+ Sbjct: 284 SGHFARAFRKYYGRTPT 300 >UniRef50_A6D6J4 Transcriptional regulator, AraC/XylS family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6D6J4_9VIBR Length = 263 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 24/161 (14%) Query: 199 NLHQPAVRK-VLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSR------------- 244 H P V++ +L LL A+ +E + + + H+S+ +LL+R Sbjct: 104 GFHSPIVQEPMLFRALLNTHLALSDENISALARDCLPHESFEQLLNRHAKPTCAYVQPIG 163 Query: 245 ------AREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVR 298 R+YV+ ++ +P+ + L +S R Q F G+ P+AWL R+RL Sbjct: 164 TKQLTQVRDYVMSHLDQPIRLEQLAKLCDLSERQFQRLFKQATGMSPHAWLTRLRLEK-S 222 Query: 299 RELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 L+ S V A+Q GF+ F+ ++ ++ PS Sbjct: 223 MVLVKAGQPSAQV---ALQTGFYDQAHFSKAFRSVYGISPS 260 >UniRef50_A5VE01 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VE01_SPHWW Length = 329 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 13/156 (8%) Query: 197 PENLHQPAVRKVLGDNLLMAM--GAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMS 254 P ++++ V + + L+ AM A + QP ++ + L RA ++ N+ Sbjct: 179 PNDIYRSRVVRKEAERLIAAMVIAACGDAGQPAEASD------FPPSLVRACAFIERNLG 232 Query: 255 EPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDA 314 V++ DLC +S L F LG P +L RL A ++ ++ +T + Sbjct: 233 GEVSIEDLCRVASISASGLNYIFKRYLGFSPLRYLALCRLEAANEMILRYPARQIT--EI 290 Query: 315 AMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 A+ GF HL +F+ Y + F E PS T R R G Sbjct: 291 ALDCGFLHLSRFSGLYAKRFGELPSQT---RNRALG 323 >UniRef50_A9BWE8 Transcriptional regulator, AraC family n=2 Tax=cellular organisms RepID=A9BWE8_DELAS Length = 320 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 55/130 (42%), Gaps = 4/130 (3%) Query: 210 GDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVS 269 G L + A+ AQP H RR L R RE + + ++ DL +S Sbjct: 187 GIALQVLACALQAHAQPRPAPSPRIHPRDRRGLERVRECMDAAPGQAHSLDDLARLACMS 246 Query: 270 RRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATD 329 TL+ F A G WL+ R+ R L WS V++AA GF H FAT Sbjct: 247 PTTLREKFQAAYGQTVFGWLRERRMQLARERLAQGWS----VQEAADCVGFQHASNFATA 302 Query: 330 YQQLFSEKPS 339 ++Q F PS Sbjct: 303 FRQRFGHAPS 312 >UniRef50_B1BZ28 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=B1BZ28_9FIRM Length = 432 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 3/99 (3%) Query: 241 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE 300 LL +Y+ ++EP+T+ ++C++ +SR +LQ F L I P ++ +I+L +E Sbjct: 329 LLQEILDYMNSMITEPLTIEEICHKFSISRSSLQTLFRNNLEISPKNYMVQIKLKK-SKE 387 Query: 301 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 LI T+ + A GF + F+ ++Q F+ PS Sbjct: 388 LIR--ENKYTISEIAFMLGFSSIHYFSRTFKQHFNLTPS 424 >UniRef50_A3WIM7 Probable transcriptional regulator n=1 Tax=Idiomarina baltica OS145 RepID=A3WIM7_9GAMM Length = 309 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 3/97 (3%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 +++A + + + EP+ V DL + +H+S AF ++ + P + K++RL+ RR + Sbjct: 196 IAQAIDIIKRRLHEPLRVKDLASAVHLSESAFYQAFKSVTAMSPIQFQKKLRLDEARRIM 255 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKP 338 + S V A Q G+ QF+ +Y +LF + P Sbjct: 256 LFEGSD---VSTACYQVGYESPSQFSREYSRLFGQSP 289 >UniRef50_A7NK51 Transcriptional regulator, AraC family n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NK51_ROSCS Length = 311 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 58/219 (26%), Positives = 93/219 (42%), Gaps = 29/219 (13%) Query: 134 PDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATF 193 P +L V+ + ++ R N R+L +++ A+ V+ L V QA Sbjct: 113 PPGGALLAVLPATTLMARLGNVDALTGRILSVVQGCGAVCVQ-----LLSALVLQA---- 163 Query: 194 CENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRR--LLSRAREYVLE 251 L R +LGD L A+ L Q + H S RR LL+ Y+ Sbjct: 164 -----PLLSAGQRLILGDGALDAIIVWLRGEQ-----TTDDHLSTRRRELLNAIYSYIDH 213 Query: 252 NMSE----PVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQ 307 + + P + D + VS R L F A GI W+ RL +R EL+ Sbjct: 214 RLEDYQLCPRVIAD---RFGVSVRYLHMLFAAT-GITVTRWITIRRLEVIRSELLRCGGD 269 Query: 308 SMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 +++D A +WGF L +F+ ++Q F E PS+ + +R+ Sbjct: 270 HGSIRDIATRWGFHDLSRFSRVFRQHFGEPPSVYVRRRV 308 >UniRef50_Q08YF3 Transcriptional regulator, AraC family n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08YF3_STIAU Length = 336 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 59/107 (55%), Gaps = 4/107 (3%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 + RA E++ + ++P+ + +L +++S +L + F A + +GP + KR+RL RR L Sbjct: 226 VGRAVEWIKTHFAQPLVIDELAKHVNMSTSSLHHKFKATVMMGPLQYQKRLRLEEARRLL 285 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMRE 348 +S + + AA G+ QF +Y++LF P + +RMR+ Sbjct: 286 LSGLADATR---AAFDVGYESPSQFIREYRRLFGTSPMRDV-KRMRD 328 >UniRef50_A1ZYI4 Putative transcriptional regulator n=2 Tax=Bacteroidetes RepID=A1ZYI4_9SPHI Length = 303 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/160 (21%), Positives = 71/160 (44%), Gaps = 9/160 (5%) Query: 180 AALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYR 239 A+ G +Q+ L F EN P+ + + D +L + + + + S+ Q Sbjct: 142 VAIHGIIQRLLFLFTEN-----HPS-KDIFADFMLKELIIRILQKENREHFSSVQSQPDD 195 Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 L+ +Y+ EN+ +P+++ L +Q+H+S F LG+ P ++ R+ R Sbjct: 196 HRLTYVIKYIKENLDQPLSIQHLSDQVHMSESNFYRVFKNELGVSPTDFINDERIKLATR 255 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 L P + +K+ ++ GF + F +++ PS Sbjct: 256 LLHDPHKK---IKEVYLECGFNSMSYFTRLFKRKKKASPS 292 >UniRef50_B2I1B8 AraC-type DNA-binding domain-containing protein n=5 Tax=Acinetobacter RepID=B2I1B8_ACIBC Length = 294 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 76/155 (49%), Gaps = 12/155 (7%) Query: 190 LATFCENPENLH--QPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRARE 247 L + P+++ P + K + LLM+ + + +V A + H+ + +A E Sbjct: 147 LIKLLDTPQDIPILSPLIIKEIFYRLLMSPQG--DRLKRIVAAGTTGHR-----IVKAIE 199 Query: 248 YVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQ 307 ++ N ++P ++ +L + + +S + F I + P + KR+RL RR L++ + Sbjct: 200 WLKTNFAKPFSIEELASTMGMSASSFHQHFRDITSMSPLQYQKRMRLTEARRLLMT---E 256 Query: 308 SMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 + +MQ G+ L QF+ +Y++ F PS+ + Sbjct: 257 EYDISSTSMQVGYESLSQFSREYKRFFGVSPSVDI 291 >UniRef50_B4SK91 Putative sigma54 specific transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia R551-3 RepID=B4SK91_STRM5 Length = 497 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 2/106 (1%) Query: 233 ISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRI 292 +SH+ L RA Y+ ++ +EPVT+ DL Q HVS+ L F + LG L+++ Sbjct: 385 LSHEGLHDGLKRALAYLKDHAAEPVTLGDLARQAHVSQSHLGFLFRSELGTTFKLLLQQL 444 Query: 293 RLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKP 338 R+ ++ L Q + + D A+Q GF L F +++ P Sbjct: 445 RIEHAKQLLRG--GQRLRITDVALQVGFGDLSHFEKSFRRAVGVSP 488 >UniRef50_UPI0001909603 transcriptional regulator, AraC family protein n=2 Tax=Rhizobium etli RepID=UPI0001909603 Length = 330 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 54/102 (52%) Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 R + RA +++ N+++P+T+ + VS R+L+ F G P A+L+ +RL+A R Sbjct: 223 RHVRRAIDFMYANIAQPLTMQSVAEAAGVSIRSLEVGFRDFKGTTPAAYLRSLRLHAARE 282 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 +L P ++ + + LG+F+ Y+ + E PS T Sbjct: 283 DLRDPLNRQPFARHLPEVGNSFTLGRFSALYRAAYGENPSDT 324 >UniRef50_C6QDX3 Transcriptional regulator, AraC family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QDX3_9RHIZ Length = 329 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 6/134 (4%) Query: 212 NLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRR 271 ++ +ML+EA + A ++ ++Y R++ +ARE + N++ P LDL Q+ ++ Sbjct: 202 GFVLEAASMLKEANRI--ANTLGRKNYDRVV-QAREIIDANLASPPKSLDLAMQVGLNLT 258 Query: 272 TLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQ 331 TLQ F A G +++R RL + R ++S + V Q GF F Y+ Sbjct: 259 TLQAHFKAAYGTSIFGYIRRERLE-LSRAMLS--DTELPVAKVGYQVGFSSPAAFTAAYR 315 Query: 332 QLFSEKPSLTLHQR 345 + F E P+ +R Sbjct: 316 RHFGEPPTRKFPRR 329 >UniRef50_Q7W554 Transcriptional regulator n=4 Tax=Bordetella RepID=Q7W554_BORPA Length = 334 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%) Query: 236 QSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLN 295 Q R+LL R RE + E E T+ DL +S TL+ FHA+ +WL+ RL Sbjct: 232 QRDRQLLERVRERLHEAPGEDHTLDDLARLACMSPSTLRAKFHAVYHRSVFSWLRERRLE 291 Query: 296 AVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 R +L WS V+ AA G+ H FAT +++ + PS Sbjct: 292 VAREQLARGWS----VQQAAHFVGYRHATNFATAFRERYGVAPS 331 >UniRef50_C6RKI0 Transcriptional regulator, AraC family n=2 Tax=Acinetobacter radioresistens RepID=C6RKI0_ACIRA Length = 337 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 1/103 (0%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 +++AR+Y+ ++ + + +L Q VS RTLQ F+ P +++ +R+ + EL Sbjct: 225 MNKARQYIARHIRNNIVLAELGKQCGVSVRTLQKGFNQYFHQTPIDYIRDLRIKLIHHEL 284 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 + TV D ++ G LG F+T Y++ + PS TL Q Sbjct: 285 QHSQAHE-TVTDILLRNGINSLGHFSTLYKKRYGCLPSQTLRQ 326 >UniRef50_Q0KJU2 Positive transcriptional regulator for anthranilate dioxygenase genes n=1 Tax=Sphingomonas sp. KA1 RepID=Q0KJU2_9SPHN Length = 318 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 2/96 (2%) Query: 244 RAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELIS 303 +A ++ E+ + P+T+ D+ V RTL + F P L+R R++ R ++ Sbjct: 211 KAEAFMREHFALPITLGDIATAAGVPARTLLDNFRKFRDESPMKALRRYRMDHAR--MLL 268 Query: 304 PWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 + +V DAA+ G HLG+F+ D+++ F PS Sbjct: 269 ETGECSSVTDAALASGVSHLGRFSRDFREQFGRLPS 304 >UniRef50_UPI0001B566E3 AraC family transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B566E3 Length = 308 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 1/109 (0%) Query: 234 SHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIR 293 SH + RR ++ A + + + EP T+ L L + +RTLQ AFH G L R Sbjct: 199 SHIASRRHVNAALAAIRQRVDEPWTIDSLAGDLGIGKRTLQAAFHEA-GSTFTGELLEAR 257 Query: 294 LNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 L R L S+ V + G H G+ + Y+QLF E P TL Sbjct: 258 LRKARSILRDAAPGSLKVTGVFARCGLHHHGRASGQYRQLFGESPKETL 306 >UniRef50_C6LKP8 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LKP8_9FIRM Length = 299 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 3/94 (3%) Query: 245 AREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISP 304 A ++ EN + TV L Q ++S F + +G+GP KR+RL RR ++ Sbjct: 196 ANSWIKENFRDSFTVESLAEQRNMSVSLFHQKFRSAVGMGPLQCQKRLRLTEARRLML-- 253 Query: 305 WSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKP 338 + V +A+++ G+ + QF DY+++F P Sbjct: 254 -DERKNVTEASVEVGYESVSQFIRDYRKMFGSAP 286 >UniRef50_A1SHQ2 Transcriptional regulator, AraC family n=1 Tax=Nocardioides sp. JS614 RepID=A1SHQ2_NOCSJ Length = 344 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 53/106 (50%) Query: 237 SYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNA 296 + R + A E + P T + L ++H+S R LQ F + P A+L+ +RL Sbjct: 234 AARTPIQHAVELIHSRPEHPWTTVGLAQEVHLSVRALQEGFRRHHDLPPMAYLREVRLLR 293 Query: 297 VRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 R L+ + V+D A GF H G+F+T Y++ F E PS TL Sbjct: 294 AHRLLLGADPDGLQVQDVAAGLGFKHHGRFSTLYRERFGEPPSATL 339 >UniRef50_D2MMM4 Transcriptional regulator, AraC family n=1 Tax=Bulleidia extructa W1219 RepID=D2MMM4_9FIRM Length = 386 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 3/99 (3%) Query: 241 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE 300 LL +Y+ ++ +P+ + LC+ VSR TLQN F + I P A++ +LN + R Sbjct: 281 LLEEIVQYINSHLYDPLPIESLCDNFAVSRSTLQNLFKNYMNITPKAYINHEKLN-LSRL 339 Query: 301 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 LI S+T A GF + F+ + Q F PS Sbjct: 340 LIRDGKYSVT--QVANLLGFNSIHYFSRKFTQKFHINPS 376 >UniRef50_Q05X95 Transcriptional regulator, AraC family protein n=1 Tax=Synechococcus sp. RS9916 RepID=Q05X95_9SYNE Length = 342 Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 53/121 (43%), Gaps = 4/121 (3%) Query: 226 PMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGP 285 P E S ++L+ + + N +T+ ++C QL+ SRRTL GP Sbjct: 218 PTGELEPFDLTSRQQLVQEFVRWGISNAKTSLTLDEICQQLYTSRRTLILGTKENFHCGP 277 Query: 286 NAWLKRIRLNAVRRELISPWSQS----MTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 L+ IRL V L SP + V + A GF G FA YQ+ F+E P T Sbjct: 278 MELLRTIRLQQVHALLRSPAERDREGLSQVSEVAAFCGFRSRGHFAKAYQEHFAESPRTT 337 Query: 342 L 342 L Sbjct: 338 L 338 >UniRef50_A7V223 Sensor protein n=2 Tax=Bacteroides RepID=A7V223_BACUN Length = 1310 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 6/136 (4%) Query: 205 VRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEP-VTVLDLC 263 +R +L + + + +AQP T + Q + L + + + E +S+ ++ D C Sbjct: 1178 IRNILQNRQHLRETVLAMDAQPEET--DYTSQLDKEFLDKVMKVIEEELSDSEFSINDFC 1235 Query: 264 NQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHL 323 L +SR ++ N + G GPN +++ +RLN + L+ S+ ++ + A GF Sbjct: 1236 RMLGMSRTSVYNKIKTLTGQGPNDFIRIVRLNKAKELLV---SRKYSIGEVANMVGFSDP 1292 Query: 324 GQFATDYQQLFSEKPS 339 F+T +++ F PS Sbjct: 1293 KYFSTCFKKQFGTSPS 1308 >UniRef50_Q3A5L7 Transcriptional regulator, AraC family n=12 Tax=Proteobacteria RepID=Q3A5L7_PELCD Length = 307 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 11/133 (8%) Query: 206 RKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQ 265 R+++ L+ GA L + + TA S S Q ++RA E++ N ++P+ + DL Q Sbjct: 170 REIIYRLLVGDQGARLRQ---IATAGSQSQQ-----IARAIEWLKGNFTQPLRIDDLAEQ 221 Query: 266 LHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQ 325 +S T + F ++ + P + K++RL RR ++ + + A Q G+ Q Sbjct: 222 ASMSTSTFHHHFRSMTALSPLQYQKQLRLREARRLMLM---ERLDAATAGFQVGYESPSQ 278 Query: 326 FATDYQQLFSEKP 338 F+ +Y +LF P Sbjct: 279 FSREYSRLFGAPP 291 >UniRef50_A5INH3 Transcriptional regulator, AraC family n=5 Tax=Thermotogaceae RepID=A5INH3_THEP1 Length = 299 Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 4/95 (4%) Query: 245 AREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISP 304 A Y+ E+ SEPV + L + +S T F + G+ P + K++RL R+ L++ Sbjct: 193 ALNYLKEHFSEPVNMKKLAEMVGMSVSTFYQNFKTLTGMTPLQYQKKLRLCEARKLLMA- 251 Query: 305 WSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 V AA Q G+ L QF+ +Y++ F PS Sbjct: 252 ---GHDVTTAAYQVGYESLSQFSREYKRFFGVSPS 283 >UniRef50_Q4V1B1 MSM (Multiple sugar metabolism) operon regulatory protein n=15 Tax=Bacilli RepID=Q4V1B1_BACCZ Length = 301 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 6/112 (5%) Query: 236 QSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLN 295 Q + RL A Y+ ++ E +TV D+ N L V+R L F GI W+ R+R+N Sbjct: 168 QKFSRLAIEAMIYIGKHYIEEITVSDVANHLAVNRSHLSRVFQNHFGISMKDWIIRMRIN 227 Query: 296 AVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 L+S ++S V++ + Q GF L F+ ++++ E P+ H R R Sbjct: 228 HAAY-LLSMTNES--VENISYQVGFHSLAAFSRIFKKVTKETPT---HYRKR 273 >UniRef50_Q3JGA1 AraC family regulatory protein n=57 Tax=Bacteria RepID=Q3JGA1_BURP1 Length = 390 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 61/112 (54%), Gaps = 5/112 (4%) Query: 236 QSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLN 295 Q+YR ++RA E++ + +EP+ V L Q+++S +L + F + + P + K++RL+ Sbjct: 277 QTYR--IARAIEWLRHHYTEPLRVETLAQQVNMSVSSLHHHFKHVTTLSPLQYQKQLRLH 334 Query: 296 AVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 RR L+ Q V A++ G+ QF+ +Y +LF P + QR R Sbjct: 335 EARRLLL---GQHGDVGSVALRVGYDSPSQFSREYSRLFGAPPLRDVVQRRR 383 >UniRef50_B6WPQ1 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WPQ1_9DELT Length = 313 Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 3/87 (3%) Query: 252 NMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTV 311 ++ PV + L Q+ +S TL F + G+ P +LK++RL+ +R ++ + M Sbjct: 209 DLGAPVRMESLARQVGMSLSTLHRHFKTVTGLSPLQYLKQLRLHEAQRLML---MEDMRA 265 Query: 312 KDAAMQWGFWHLGQFATDYQQLFSEKP 338 AA+ G+ + QF+ +Y+++F E P Sbjct: 266 ASAALSVGYESVTQFSREYKRMFGEPP 292 >UniRef50_B8LAL9 Transcriptional regulator n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAL9_9GAMM Length = 491 Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 2/105 (1%) Query: 234 SHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIR 293 SH L RA Y+ ++ +EPVT+ DL Q HVS+ L F + LG L++ R Sbjct: 380 SHDGLHDGLKRALAYLKDHAAEPVTLGDLARQAHVSQSHLGFLFRSELGTTFKLLLQQQR 439 Query: 294 LNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKP 338 + ++ L Q + + D A+Q GF L F +++L P Sbjct: 440 IEHAKQLLRG--GQRLRITDVALQVGFGDLSHFEKSFRRLVGVSP 482 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P36547 HTH-type transcriptional regulator eutR n=115 Ta... 487 e-136 UniRef50_A6VSI6 Helix-turn-helix-domain containing protein AraC ... 317 3e-85 UniRef50_Q5P0V5 Transcriptional regulator, AraC family, n=3 Tax=... 306 8e-82 UniRef50_A1VQJ8 Transcriptional regulator, AraC family n=4 Tax=B... 303 7e-81 UniRef50_Q1N3C0 HTH-type transcriptional regulator eutR n=1 Tax=... 296 8e-79 UniRef50_C6WX32 Transcriptional regulator, AraC family n=2 Tax=P... 287 4e-76 UniRef50_Q1H3X2 Transcriptional regulator, AraC family n=3 Tax=P... 280 5e-74 UniRef50_Q87WL8 Transcriptional regulator, AraC family n=5 Tax=P... 279 9e-74 UniRef50_A0B1I5 Transcriptional regulator, AraC family n=25 Tax=... 277 4e-73 UniRef50_B9Z415 Transcriptional regulator, AraC family n=1 Tax=L... 274 3e-72 UniRef50_C4KY56 Ethanolamine operon transcriptional activator Eu... 274 4e-72 UniRef50_Q5P5Q4 Probable regulatory protein n=1 Tax=Aromatoleum ... 273 7e-72 UniRef50_B7KJD4 Transcriptional regulator, AraC family n=1 Tax=C... 269 1e-70 UniRef50_A6W073 Helix-turn-helix-domain containing protein AraC ... 268 2e-70 UniRef50_C4I2G6 Transcriptional regulator, AraC family n=26 Tax=... 267 3e-70 UniRef50_A0B2C1 Transcriptional regulator, AraC family n=17 Tax=... 264 4e-69 UniRef50_A1SRM6 DNA-binding helix-turn-helix domain-containing t... 259 1e-67 UniRef50_C4KAZ9 Transcriptional regulator, AraC family n=1 Tax=T... 257 3e-67 UniRef50_B1Z491 Transcriptional regulator, AraC family n=6 Tax=B... 256 1e-66 UniRef50_C6XCD3 Transcriptional regulator, AraC family n=1 Tax=M... 256 1e-66 UniRef50_A5EM40 Transcriptional regulator, AraC family n=1 Tax=B... 252 1e-65 UniRef50_A9AKQ9 AraC family transcriptional regulator n=1 Tax=Bu... 252 2e-65 UniRef50_A0Y3G2 Transcriptional regulator, AraC family protein n... 252 2e-65 UniRef50_A5EB19 Transcriptional regulator, AraC family n=2 Tax=B... 251 2e-65 UniRef50_C6QHZ1 Transcriptional regulator, AraC family n=1 Tax=H... 251 4e-65 UniRef50_C3KB89 Putative AraC family regulatory protein n=1 Tax=... 251 4e-65 UniRef50_A7JZD1 Ethanolamine operon regulatory protein n=3 Tax=V... 249 1e-64 UniRef50_A1TWG5 Transcriptional regulator, AraC family n=2 Tax=A... 248 2e-64 UniRef50_C3KBA5 AraC family regulatory protein n=2 Tax=Proteobac... 247 3e-64 UniRef50_A2SJ66 Transcriptional regulator, AraC family n=1 Tax=M... 247 6e-64 UniRef50_A2SII1 Transcriptional regulator, AraC family n=1 Tax=M... 246 7e-64 UniRef50_D1T8Q5 AraC family transcriptional regulator n=1 Tax=Bu... 245 2e-63 UniRef50_Q88I52 Transcriptional regulator, AraC family n=8 Tax=P... 239 1e-61 UniRef50_B1YYW7 Transcriptional regulator, AraC family n=5 Tax=B... 237 5e-61 UniRef50_A4JQI4 Transcriptional regulator, AraC family n=5 Tax=B... 236 1e-60 UniRef50_Q46TV6 Transcriptional regulator, AraC family n=1 Tax=R... 229 1e-58 UniRef50_Q488C6 Transcriptional regulator, AraC family n=2 Tax=C... 226 7e-58 UniRef50_Q0K462 Transcriptional regulator, AraC-family n=1 Tax=R... 222 2e-56 UniRef50_UPI00006A2B14 UPI00006A2B14 related cluster n=1 Tax=Xen... 207 6e-52 UniRef50_A3YU12 Transcriptional regulator, AraC family protein n... 198 3e-49 UniRef50_C9PH24 Ethanolamine operon regulatory protein n=1 Tax=V... 184 4e-45 UniRef50_B4AUP2 Transcriptional regulator, AraC family n=1 Tax=C... 184 5e-45 UniRef50_Q987P8 Transcriptional regulator n=1 Tax=Mesorhizobium ... 184 6e-45 UniRef50_UPI00016AB122 ethanolamine operon transcriptional activ... 177 5e-43 UniRef50_B2I0G9 AraC-type DNA-binding domain-containing protein ... 176 1e-42 UniRef50_A1K6X6 Putative AraC-family transcriptional regulator n... 174 4e-42 UniRef50_D1T5H4 AraC family transcriptional regulator n=1 Tax=Bu... 172 1e-41 UniRef50_D1SW59 Transcriptional regulator, AraC family n=5 Tax=P... 172 2e-41 UniRef50_D0LFC4 Helix-turn-helix-domain containing protein AraC ... 172 2e-41 UniRef50_D2BF03 AraC family transcriptional regulator n=1 Tax=St... 172 2e-41 UniRef50_Q3LUX0 Transcriptional activator (Fragment) n=2 Tax=Pse... 170 8e-41 UniRef50_A3YW71 Transcriptional regulator, AraC family protein n... 169 2e-40 UniRef50_Q0SE50 Transcriptional regulator, AraC family protein n... 168 2e-40 UniRef50_UPI0001C38021 transcriptional regulator, AraC family pr... 168 3e-40 UniRef50_D1U469 Transcriptional regulator, AraC family n=1 Tax=D... 168 3e-40 UniRef50_B2T964 Transcriptional regulator, AraC family n=1 Tax=B... 168 3e-40 UniRef50_A1K6U8 Putative AraC-family transcriptional regulator n... 167 6e-40 UniRef50_B3Q2C8 Putative transcriptional regulator protein, AraC... 166 1e-39 UniRef50_B9JJ58 Transcriptional regulator protein n=1 Tax=Agroba... 166 1e-39 UniRef50_Q5YXL4 Putative transcriptional regulator n=1 Tax=Nocar... 165 3e-39 UniRef50_A1UDL6 Transcriptional regulator, AraC family n=6 Tax=M... 164 3e-39 UniRef50_Q47GE0 Transcriptional regulator, AraC family n=1 Tax=D... 163 5e-39 UniRef50_Q1LI32 Transcriptional regulator, AraC family n=3 Tax=C... 163 7e-39 UniRef50_Q39MU6 Transcriptional regulator, AraC family n=10 Tax=... 163 1e-38 UniRef50_Q2G526 Transcriptional regulator, AraC family n=1 Tax=N... 162 1e-38 UniRef50_A6QA54 Putative uncharacterized protein n=1 Tax=Sulfuro... 162 3e-38 UniRef50_Q0S024 Transcriptional regulator, AraC family protein n... 161 3e-38 UniRef50_C6B4J9 Transcriptional regulator, AraC family n=8 Tax=R... 161 4e-38 UniRef50_P43462 Probable thc operon regulatory protein n=3 Tax=R... 161 4e-38 UniRef50_Q6W1W0 Putative AraC family transcriptional regulatory ... 161 4e-38 UniRef50_Q0K6C4 Transcriptional regulator, AraC-family n=3 Tax=C... 160 5e-38 UniRef50_Q4KIN6 Transcriptional regulator, AraC family n=15 Tax=... 160 5e-38 UniRef50_C6B4N8 Transcriptional regulator, AraC family n=13 Tax=... 160 6e-38 UniRef50_B9JJ57 Transcriptional regulator protein n=1 Tax=Agroba... 160 6e-38 UniRef50_C7N068 DNA-binding domain-containing protein, AraC-type... 160 8e-38 UniRef50_B5W7W7 Transcriptional regulator, AraC family n=1 Tax=A... 160 8e-38 UniRef50_B6A526 Transcriptional regulator, AraC family n=4 Tax=R... 159 1e-37 UniRef50_B3Q2F7 Probable transcriptional regulator protein, AraC... 159 1e-37 UniRef50_Q4C4B2 Helix-turn-helix, AraC type n=1 Tax=Crocosphaera... 159 1e-37 UniRef50_C5AKE9 Transcriptional regulator, AraC family protein n... 158 2e-37 UniRef50_Q0SDR9 Transcriptional regulator, AraC family protein n... 158 2e-37 UniRef50_Q0SIM0 Transcriptional regulator, AraC family protein n... 158 3e-37 UniRef50_A5VD66 Transcriptional regulator, AraC family n=1 Tax=S... 157 4e-37 UniRef50_A1WJE1 Transcriptional regulator, AraC family n=1 Tax=V... 157 4e-37 UniRef50_A9BUW9 Transcriptional regulator, AraC family n=1 Tax=D... 157 5e-37 UniRef50_B3QCR7 Transcriptional regulator, AraC family n=2 Tax=R... 157 5e-37 UniRef50_C3KLQ8 Probable transcriptional regulator protein, AraC... 157 6e-37 UniRef50_C3KLK8 Probable transcriptional regulator protein, AraC... 157 7e-37 UniRef50_B2I0G2 AraC-type DNA-binding domain-containing protein ... 157 8e-37 UniRef50_Q0K9L2 Transcriptional regulator, AraC-family n=2 Tax=C... 157 8e-37 UniRef50_C3MI82 Putative AraC family transcriptional regulatory ... 157 8e-37 UniRef50_Q05335 XylDLEGF operon transcriptional activator 3 n=35... 157 8e-37 UniRef50_B9JL66 Transcriptional regulator protein n=1 Tax=Agroba... 156 1e-36 UniRef50_A1T7M7 Transcriptional regulator, AraC family n=2 Tax=M... 156 1e-36 UniRef50_B0SX63 Transcriptional regulator, AraC family n=1 Tax=C... 155 2e-36 UniRef50_A1K6W1 Putative AraC-family transcriptional regulator n... 155 2e-36 UniRef50_B8ESU5 Transcriptional regulator, AraC family n=1 Tax=M... 155 3e-36 UniRef50_UPI0001AF5566 helix-turn-helix domain-containing protei... 154 4e-36 UniRef50_A1R1F9 Transcriptional regulator, AraC family n=1 Tax=A... 154 4e-36 UniRef50_Q46VL0 Transcriptional regulator, AraC family n=1 Tax=R... 153 6e-36 UniRef50_D1BV80 Transcriptional regulator, AraC family n=1 Tax=X... 153 1e-35 UniRef50_A5V4X1 Transcriptional regulator, AraC family n=2 Tax=S... 152 1e-35 UniRef50_A1WJA6 Transcriptional regulator, AraC family n=1 Tax=V... 152 2e-35 UniRef50_C6B5E0 Transcriptional regulator, AraC family n=7 Tax=R... 151 3e-35 UniRef50_A5VE15 Transcriptional regulator, AraC family n=1 Tax=S... 151 3e-35 UniRef50_B0JHC6 Transcriptional regulator n=3 Tax=Microcystis ae... 151 4e-35 UniRef50_B3Q6V1 Transcriptional regulator, AraC family n=2 Tax=R... 151 4e-35 UniRef50_B9JM27 Transcriptional regulator protein, AraC family n... 150 8e-35 UniRef50_C5CKJ3 Transcriptional regulator, AraC family n=2 Tax=V... 150 1e-34 UniRef50_B8Y4V1 EthR n=4 Tax=Corynebacterineae RepID=B8Y4V1_9NOCA 149 1e-34 UniRef50_Q3JJW1 AndR n=53 Tax=Burkholderia RepID=Q3JJW1_BURP1 148 2e-34 UniRef50_A0QJX7 Transcriptional regulator, AraC family protein n... 148 2e-34 UniRef50_B6B515 Transcriptional regulator, AraC family n=1 Tax=R... 148 3e-34 UniRef50_Q39N46 Transcriptional regulator, AraC family n=2 Tax=B... 148 3e-34 UniRef50_UPI00019090B3 AraC family transcriptional regulator n=1... 148 3e-34 UniRef50_A1T1B9 Transcriptional regulator, AraC family n=2 Tax=M... 148 4e-34 UniRef50_C6WK40 Transcriptional regulator, AraC family n=1 Tax=A... 147 5e-34 UniRef50_Q89CX9 Transcriptional regulatory protein n=1 Tax=Brady... 147 6e-34 UniRef50_B5ZVG3 Transcriptional regulator, AraC family n=1 Tax=R... 147 6e-34 UniRef50_UPI00016A2E59 transcriptional regulator, AraC family pr... 147 7e-34 UniRef50_C6WIT0 Transcriptional regulator, AraC family n=2 Tax=A... 147 8e-34 UniRef50_B9Z058 Transcriptional regulator, AraC family n=1 Tax=L... 146 9e-34 UniRef50_A5V4Y1 Transcriptional regulator, AraC family n=1 Tax=S... 146 1e-33 UniRef50_A5V484 Transcriptional regulator, AraC family n=2 Tax=S... 146 1e-33 UniRef50_A4EX82 Transcriptional regulator, AraC family protein n... 146 1e-33 UniRef50_A7ICV7 Helix-turn-helix-domain containing protein AraC ... 146 1e-33 UniRef50_A6X646 Helix-turn-helix-domain containing protein AraC ... 146 1e-33 UniRef50_B3QGC9 Transcriptional regulator, AraC family n=5 Tax=R... 145 2e-33 UniRef50_UPI0001B4618F transcriptional regulator, AraC family pr... 145 3e-33 UniRef50_C9N369 Transcriptional regulator, AraC family n=1 Tax=S... 145 3e-33 UniRef50_A5V7Y2 Transcriptional regulator, AraC family n=1 Tax=S... 145 3e-33 UniRef50_B4EDN0 AraC family regulatory protein n=1 Tax=Burkholde... 145 3e-33 UniRef50_Q9AJR3 Transcriptional activator n=2 Tax=Proteobacteria... 145 3e-33 UniRef50_C4DJB3 DNA-binding domain-containing protein, AraC-type... 143 7e-33 UniRef50_B9K3F5 Transcriptional regulator AraC family n=1 Tax=Ag... 143 1e-32 UniRef50_Q9KW95 Riorf89 protein n=2 Tax=Agrobacterium rhizogenes... 143 1e-32 UniRef50_A6VRG8 Helix-turn-helix-domain containing protein AraC ... 142 2e-32 UniRef50_Q5LPA0 Transcriptional regulator, AraC family n=1 Tax=R... 142 2e-32 UniRef50_A5V5G7 Transcriptional regulator, AraC family n=1 Tax=S... 142 3e-32 UniRef50_Q05X95 Transcriptional regulator, AraC family protein n... 141 3e-32 UniRef50_A5EL73 Transcriptional regulator, AraC family n=2 Tax=B... 141 3e-32 UniRef50_C5CKJ0 Transcriptional regulator, AraC family n=1 Tax=V... 141 4e-32 UniRef50_Q0FPK9 Transcriptional regulator, AraC family protein n... 140 5e-32 UniRef50_D2M666 Transcriptional regulator, AraC family n=1 Tax=R... 140 5e-32 UniRef50_Q07KT1 Transcriptional regulator, AraC family n=1 Tax=R... 140 9e-32 UniRef50_C5CZK1 Transcriptional regulator, AraC family n=1 Tax=V... 140 9e-32 UniRef50_Q13EW4 Transcriptional regulator, AraC family n=5 Tax=R... 138 2e-31 UniRef50_Q1QJ52 Transcriptional regulator, AraC family n=1 Tax=N... 138 2e-31 UniRef50_Q05092 XylDLEGF operon transcriptional activator 2 n=2 ... 138 2e-31 UniRef50_A5CMT0 Putative transcriptional regulator, AraC family ... 138 3e-31 UniRef50_C4RJP1 AraC family transcriptional regulator n=1 Tax=Mi... 138 3e-31 UniRef50_UPI0001909603 transcriptional regulator, AraC family pr... 138 3e-31 UniRef50_A1T1Y4 Transcriptional regulator, AraC family n=1 Tax=M... 138 3e-31 UniRef50_A3K773 Transcriptional regulator, AraC family protein n... 138 3e-31 UniRef50_A6EXV2 BenABC operon transcriptional activator BenR n=2... 138 3e-31 UniRef50_Q2IVS4 Transcriptional regulator, AraC family n=2 Tax=R... 138 4e-31 UniRef50_A3PHN4 Helix-turn-helix-domain containing protein, AraC... 138 4e-31 UniRef50_Q0S6X8 Transcriptional regulator, AraC family protein n... 137 5e-31 UniRef50_A9EZ15 Transcriptional regulator, AraC family protein n... 137 5e-31 UniRef50_A0K0Q9 Transcriptional regulator, AraC family n=2 Tax=A... 137 5e-31 UniRef50_Q5Z0F0 Putative transcriptional regulator n=1 Tax=Nocar... 137 7e-31 UniRef50_Q47CB9 Transcriptional regulator, AraC family n=1 Tax=D... 137 8e-31 UniRef50_B3QH76 Transcriptional regulator, AraC family n=3 Tax=R... 136 1e-30 UniRef50_B7RQR5 Transcriptional regulator, AraC family n=1 Tax=R... 136 1e-30 UniRef50_B4SLW6 Transcriptional regulator, AraC family n=3 Tax=S... 135 2e-30 UniRef50_B9QYF5 Putative uncharacterized protein n=1 Tax=Labrenz... 135 2e-30 UniRef50_A0NVQ0 Transcriptional regulator, AraC family protein n... 135 2e-30 UniRef50_B8H6K6 Transcriptional regulator, AraC family n=2 Tax=A... 135 2e-30 UniRef50_Q0RUS5 Possible transcriptional regulator, AraC family ... 135 2e-30 UniRef50_Q07S24 Transcriptional regulator, AraC family n=1 Tax=R... 135 2e-30 UniRef50_UPI0001AF7528 hypothetical protein MkanA1_24775 n=1 Tax... 135 3e-30 UniRef50_A1ULB3 Transcriptional regulator, AraC family n=3 Tax=M... 134 5e-30 UniRef50_Q1Q9Q6 Transcriptional regulator, AraC family n=2 Tax=G... 134 5e-30 UniRef50_Q2T8G3 Transcriptional regulator, AraC family n=15 Tax=... 133 6e-30 UniRef50_UPI0001B53BB4 transcriptional regulator, AraC family pr... 133 8e-30 UniRef50_A5INH3 Transcriptional regulator, AraC family n=5 Tax=T... 133 1e-29 UniRef50_C3UVB3 Putative AraC family transcriptional regulator n... 132 1e-29 UniRef50_Q07S23 Transcriptional regulator, AraC family n=2 Tax=R... 132 2e-29 UniRef50_UPI0001746906 putative ethanolamine operon transcriptio... 132 3e-29 UniRef50_A4CW16 Transcriptional regulator, AraC family protein n... 131 3e-29 UniRef50_D0T367 Transcriptional regulator n=2 Tax=Acinetobacter ... 131 4e-29 UniRef50_A1K4I0 Putative AraC-family transcriptional regulator n... 131 4e-29 UniRef50_A7NK51 Transcriptional regulator, AraC family n=1 Tax=R... 131 4e-29 UniRef50_Q89FI3 Transcriptional regulatory protein n=3 Tax=Brady... 131 5e-29 UniRef50_C1BBD9 Putative AraC family transcriptional regulator n... 130 5e-29 UniRef50_Q3AVD9 Transcriptional regulator, AraC family n=2 Tax=S... 130 6e-29 UniRef50_A9I2R8 AraC-type transcriptional regulator n=3 Tax=Burk... 130 9e-29 UniRef50_C4KBC2 Transcriptional regulator, AraC family n=1 Tax=T... 130 1e-28 UniRef50_B2I1B8 AraC-type DNA-binding domain-containing protein ... 129 1e-28 UniRef50_A6Q8V3 Putative uncharacterized protein n=1 Tax=Sulfuro... 129 1e-28 UniRef50_Q3JGA1 AraC family regulatory protein n=57 Tax=Bacteria... 129 2e-28 UniRef50_A1WQJ9 Transcriptional regulator, AraC family n=1 Tax=V... 128 2e-28 UniRef50_B5IIP6 Putative transcriptional regulator n=1 Tax=Cyano... 128 2e-28 UniRef50_A5V473 Helix-turn-helix-domain containing protein, AraC... 128 3e-28 UniRef50_A5GRM4 Putative transcriptional regulator n=1 Tax=Synec... 128 4e-28 UniRef50_A5EPU2 Putative transcriptional regulatory protein with... 127 5e-28 UniRef50_C8S415 Transcriptional regulator, AraC family n=1 Tax=R... 127 5e-28 UniRef50_A1UF63 Transcriptional regulator, AraC family n=4 Tax=M... 127 5e-28 UniRef50_A8KCK0 HTH AraC-type regulator n=1 Tax=[Polyangium] bra... 127 6e-28 UniRef50_Q8RL38 Putative uncharacterized protein n=2 Tax=Burkhol... 127 6e-28 UniRef50_A6B9E2 Transcriptional regulator, AraC family n=5 Tax=G... 127 6e-28 UniRef50_A5VE01 Helix-turn-helix-domain containing protein, AraC... 126 1e-27 UniRef50_C6RKI0 Transcriptional regulator, AraC family n=2 Tax=A... 126 1e-27 UniRef50_C3X9E6 Transcriptional regulator n=2 Tax=Proteobacteria... 126 1e-27 UniRef50_Q89JG6 Blr5317 protein n=1 Tax=Bradyrhizobium japonicum... 125 2e-27 UniRef50_A5EE87 Putative transcriptional regulatory protein, Ara... 125 2e-27 UniRef50_UPI0001B566E3 AraC family transcriptional regulator n=1... 125 2e-27 UniRef50_Q89NR2 Bll3772 protein n=1 Tax=Bradyrhizobium japonicum... 125 2e-27 UniRef50_A6EWL3 Helix-turn-helix, AraC type:Arac protein, arabin... 125 3e-27 UniRef50_B8DKQ8 Transcriptional regulator, AraC family n=2 Tax=D... 125 4e-27 UniRef50_Q1YY61 Hypothetical transcriptional regulator, AraC/Xyl... 124 4e-27 UniRef50_B1YXB0 Transcriptional regulator, AraC family n=2 Tax=B... 124 5e-27 UniRef50_C8P3F6 ARAC-type regulatory protein n=2 Tax=Erysipeloth... 124 5e-27 UniRef50_Q07QE9 Transcriptional regulator, AraC family n=1 Tax=R... 124 5e-27 UniRef50_Q08YF3 Transcriptional regulator, AraC family n=1 Tax=S... 124 6e-27 UniRef50_Q6FBB1 Putative transcriptional regulator (AraC family)... 123 8e-27 UniRef50_Q0KJU2 Positive transcriptional regulator for anthranil... 123 9e-27 UniRef50_Q880S7 Transcriptional regulator, AraC family n=2 Tax=P... 123 1e-26 UniRef50_B3SEQ8 Putative uncharacterized protein (Fragment) n=1 ... 123 1e-26 UniRef50_UPI0001B55AC3 AraC family transcriptional regulator n=1... 122 1e-26 UniRef50_A9D6L8 Helix-turn-helix, AraC type n=1 Tax=Hoeflea phot... 122 1e-26 UniRef50_Q6W1W1 Probable AraC family transcriptional regulatory ... 122 2e-26 UniRef50_B5IQ44 Transcriptional regulator, AraC family protein n... 122 2e-26 UniRef50_A1ZYI4 Putative transcriptional regulator n=2 Tax=Bacte... 122 2e-26 UniRef50_B4E7T1 AraC family regulatory protein n=1 Tax=Burkholde... 122 2e-26 UniRef50_B8JHL7 Transcriptional regulator, AraC family n=5 Tax=P... 122 3e-26 UniRef50_B1J6N5 Transcriptional regulator, AraC family n=3 Tax=P... 122 3e-26 UniRef50_A9IG97 Transcriptional regulator, AraC family n=4 Tax=P... 122 3e-26 UniRef50_A3WIM7 Probable transcriptional regulator n=1 Tax=Idiom... 121 4e-26 Sequences not found previously or not previously below threshold: UniRef50_Q3AUH0 Transcriptional regulator, AraC family n=4 Tax=S... 132 3e-29 UniRef50_B8KQ27 Transcriptional regulator, AraC family n=1 Tax=g... 131 5e-29 UniRef50_D0I5P8 Transcriptional regulator AraC family n=1 Tax=Gr... 129 1e-28 UniRef50_Q38ZW3 Transcriptional regulator, AraC family n=2 Tax=B... 129 2e-28 UniRef50_A9U6Q0 Predicted protein n=1 Tax=Physcomitrella patens ... 127 6e-28 UniRef50_Q2SF73 AraC-type DNA-binding domain-containing protein ... 127 6e-28 UniRef50_Q0SCS8 Transcriptional regulator, AraC family protein n... 127 7e-28 UniRef50_A2SM26 Transcriptional regulator, AraC family n=1 Tax=M... 125 2e-27 UniRef50_C5CKL4 Transcriptional regulator, AraC family n=1 Tax=V... 125 2e-27 UniRef50_C6BWP6 Transcriptional regulator, AraC family n=1 Tax=D... 125 2e-27 UniRef50_C9YUR8 Putative transcriptional regulator n=1 Tax=Strep... 125 3e-27 UniRef50_Q46855 Uncharacterized HTH-type transcriptional regulat... 124 4e-27 UniRef50_A4XVM8 Transcriptional regulator, AraC family n=15 Tax=... 123 7e-27 UniRef50_B8K6M7 Transcriptional regulator, AraC/XylS family n=1 ... 123 8e-27 UniRef50_A9B3B5 Transcriptional regulator, AraC family n=1 Tax=H... 123 9e-27 UniRef50_Q0IBZ7 Possible AraC-type regulatory protein, putative ... 123 1e-26 UniRef50_B9JGH7 Transcriptional regulator protein n=14 Tax=Prote... 122 2e-26 UniRef50_B9M3B3 Transcriptional regulator, AraC family n=1 Tax=G... 122 3e-26 UniRef50_C6CSL0 Transcriptional regulator, AraC family n=2 Tax=P... 122 3e-26 UniRef50_C5CMS2 Transcriptional regulator, AraC family n=1 Tax=V... 122 3e-26 UniRef50_C0VLQ6 AraC-type DNA-binding domain-containing protein ... 121 3e-26 >UniRef50_P36547 HTH-type transcriptional regulator eutR n=115 Tax=Bacteria RepID=EUTR_ECOLI Length = 350 Score = 487 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 350/350 (100%), Positives = 350/350 (100%) Query: 1 MKKTRTANLHHLYHEPLPENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPG 60 MKKTRTANLHHLYHEPLPENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPG Sbjct: 1 MKKTRTANLHHLYHEPLPENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPG 60 Query: 61 KFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEI 120 KFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEI Sbjct: 61 KFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEI 120 Query: 121 ATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKA 180 ATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKA Sbjct: 121 ATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKA 180 Query: 181 ALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRR 240 ALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRR Sbjct: 181 ALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRR 240 Query: 241 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE 300 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE Sbjct: 241 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE 300 Query: 301 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG Sbjct: 301 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 >UniRef50_A6VSI6 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VSI6_MARMS Length = 324 Score = 317 bits (813), Expect = 3e-85, Method: Composition-based stats. Identities = 122/328 (37%), Positives = 175/328 (53%), Gaps = 14/328 (4%) Query: 20 NLKLTPK----VEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQ 75 NLK PK + V + D HA +T WQQ YDQ+ G F+G E+ D +Q Sbjct: 4 NLKNAPKEGFPPRISKVRLSEAHDADLHASNLTNWQQEYDQISRGSFYGRIVELPFDGLQ 63 Query: 76 VFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPD 135 VF E+T AL+Q C+VWP+S W GIP E+ I + I RPG +F+LSTP Sbjct: 64 VFCEHTSQALQQKCVVWPDSVWLGIPLVDQEESRINGLTINPNNIMCRPGDCDFQLSTPQ 123 Query: 136 DYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCE 195 DY + G+V+ + + A +H D L L V ++ V+ LA Sbjct: 124 DYDLYGLVVDRSKLIKMAA-IHGVDLNWKELTECGRLGVPDKTLEE----VRFVLARLLS 178 Query: 196 NPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSE 255 N P +++ D ++MA+ +L+ P A++ S+ ++++ AR+++ ++ E Sbjct: 179 VQNNTTPPRLQQ---DIVMMALLEVLKVETPQ-PAKTQSYYHRKKVVDCARQFLDYHLDE 234 Query: 256 PVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAA 315 PVTV LC +VSRRTLQ +F +ILG+ P +L+ RLN VRR L+ V D A Sbjct: 235 PVTVTQLCEITNVSRRTLQYSFESILGVSPIQYLRISRLNGVRRSLVQAKDGQA-VSDIA 293 Query: 316 MQWGFWHLGQFATDYQQLFSEKPSLTLH 343 QWGFWHL QFA DY+ LF E+PS TL Sbjct: 294 AQWGFWHLSQFAKDYKLLFGEQPSQTLE 321 >UniRef50_Q5P0V5 Transcriptional regulator, AraC family, n=3 Tax=Rhodocyclaceae RepID=Q5P0V5_AZOSE Length = 343 Score = 306 bits (784), Expect = 8e-82, Method: Composition-based stats. Identities = 101/313 (32%), Positives = 153/313 (48%), Gaps = 2/313 (0%) Query: 31 NVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCL 90 +V Q T D +HA + W+Q YDQL G F G+F E ++QVFRE T + + Sbjct: 22 SVVQLDTRDADDHASCLQHWRQRYDQLSAGLFSGKFEEFWFGNVQVFRERTNQVIHEIGS 81 Query: 91 VWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVIT 150 W S G+P G+ + G + T GG + + TP + ++ V + Sbjct: 82 AWEGSRTVGVPVALDGTGWYCGEACGVDSLITLRGGDDLDYRTPRVHDVVAVTTDTQAFS 141 Query: 151 RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLG 210 A + + D + + N+ + + L F+ +++ PE L P +RK L Sbjct: 142 DYATQVEHRD-IEAEIGNRRVIAATPEQATTLRSFLLTVISSLEATPELLRHPQMRKGLE 200 Query: 211 DNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSR 270 + ++ + S + + ++ RAREY+ ++ EP+TV DLC +L VSR Sbjct: 201 QAIYASLLTAI-NGSLDAARASTPGRGRQLIVDRAREYMSAHIDEPITVADLCTELEVSR 259 Query: 271 RTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDY 330 RTLQ +F IL + P ++L+ +RLN VRR L S V D A QWGFWHL FA DY Sbjct: 260 RTLQYSFQDILNLNPVSFLRALRLNGVRRALKSAEHGHAAVADIAAQWGFWHLSHFAADY 319 Query: 331 QQLFSEKPSLTLH 343 + +F E PS TL Sbjct: 320 RTMFGELPSETLR 332 >UniRef50_A1VQJ8 Transcriptional regulator, AraC family n=4 Tax=Burkholderiales RepID=A1VQJ8_POLNA Length = 347 Score = 303 bits (776), Expect = 7e-81, Method: Composition-based stats. Identities = 124/328 (37%), Positives = 179/328 (54%), Gaps = 10/328 (3%) Query: 26 KVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLAL 85 + E + + Q D +HA +TAW+Q YDQ+ G FHG TE+ + +QVF E+T A+ Sbjct: 22 QGESPRIRKVQAHDADDHARNLTAWEQRYDQVTRGPFHGTLTELRMPAMQVFMEHTSQAV 81 Query: 86 RQSCLVWPNSFWFGIPATRGEQG-------FIGSQCLGSAEIATRPGGTEFELSTPDDYT 138 RQSC VWP++FWFG+P G I + + I RPG EFEL TP DY Sbjct: 82 RQSCCVWPDAFWFGVPGGANTAGERSGMNARINGRLGDADTIMVRPGNREFELLTPADYA 141 Query: 139 ILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPE 198 I G+V+ D + A+ L + R + L V E + A + + + + Sbjct: 142 IYGIVIKRDSLLVTASQLGCRIDWAQLERAE-VLHVAESARLACQQTLARLI--LQGRAD 198 Query: 199 NLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVT 258 + QP + +M + +A + +A S S +R+++RAR+YVL + + VT Sbjct: 199 SEGQPVASVACAEQAVMLAVLSMLDASEVDSAVSNSFMRRQRIVARARDYVLGHRDQLVT 258 Query: 259 VLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQW 318 V +LC +LHVSRRTLQ F +L I P +L+ IRLN RREL S + TV+D A W Sbjct: 259 VPELCERLHVSRRTLQYCFEDVLAISPIQYLRLIRLNGARRELRERCSDARTVRDIAADW 318 Query: 319 GFWHLGQFATDYQQLFSEKPSLTLHQRM 346 GFWH QF++DY++LF + PS +L QRM Sbjct: 319 GFWHFSQFSSDYRKLFGQSPSESLRQRM 346 >UniRef50_Q1N3C0 HTH-type transcriptional regulator eutR n=1 Tax=Bermanella marisrubri RepID=Q1N3C0_9GAMM Length = 321 Score = 296 bits (758), Expect = 8e-79, Method: Composition-based stats. Identities = 106/317 (33%), Positives = 158/317 (49%), Gaps = 12/317 (3%) Query: 27 VEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALR 86 + D EHA +T WQQ YDQ+ PG F G E+ L+ IQVF+E+T ++ Sbjct: 11 SRCGKIRHITAHDADEHAHNLTNWQQEYDQVSPGAFEGSIKELQLNGIQVFKEFTSQSVF 70 Query: 87 QSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSE 146 Q C VW +S W G+P ++ EQ I L S ++ RPG +F L TP + I G+V+ + Sbjct: 71 QKCNVWSDSLWIGLPESKPEQSRINGHHLQSHQVMCRPGDIDFSLMTPSQFNIFGIVIDQ 130 Query: 147 DVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVR 206 +++ N + + Q +L KA + + L +P + Sbjct: 131 SLLS-------NIEDSDYSSAQQFSLSECISLKAKTYNNLHYLLQRLLMHP----HDGIP 179 Query: 207 KVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQL 266 + + +LL+ + + + S + +++ Y+ ++ EPVTV +LC Sbjct: 180 EKVCHDLLLLALHDVLTPESVNCLPPTSLKRRNQIVDLTLHYLKQHHDEPVTVTELCTLA 239 Query: 267 HVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQF 326 VSRRTLQ +F ++LGI P +L+ RLN RR L Q + D A QWGFWHL QF Sbjct: 240 CVSRRTLQYSFESVLGISPAHFLRISRLNGARRSLRQATEQDC-IADVAAQWGFWHLSQF 298 Query: 327 ATDYQQLFSEKPSLTLH 343 A DY+QLF E PS T H Sbjct: 299 AKDYKQLFGELPSETKH 315 >UniRef50_C6WX32 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria RepID=C6WX32_METML Length = 339 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 87/330 (26%), Positives = 146/330 (44%), Gaps = 3/330 (0%) Query: 19 ENLKLTPKVEVDNVH--QRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQV 76 E L ++P +H +R+TTDV E A + W Q Y QL G F G + + +QV Sbjct: 6 EFLGISPTGGSPKIHLVERKTTDVLEQADALPFWSQDYTQLSKGTFSGGLSSVTHHGVQV 65 Query: 77 FREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDD 136 FRE A+ Q +++ G+P G + + T E T + Sbjct: 66 FRETMNRAVDQIAFAPADAYVIGLPTIIEGDASWGLMPVKPNAMITLDKNAELVFRTSNL 125 Query: 137 YTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCEN 196 I V+S + A + D M + + A L + + + Sbjct: 126 SEITAAVISAQRLEEYAAQVEWIDLRKAMESVKPVERISPDVTARLQASLTDGMHYVSKF 185 Query: 197 PENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEP 256 + + ++ ++L+ L +A S H+ +R +++R R+ L + P Sbjct: 186 RDTEDAEQIWRLFENDLMATCLQALLQA-SNSPNHSHDHRIHRYIVNRVRDLTLSSSGYP 244 Query: 257 VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAM 316 +T+ +LC L +SRRTL +AF +LGI P A+++ +RL+ +R EL S Q + A Sbjct: 245 LTIEELCISLRISRRTLNHAFIRVLGITPVAYMRNVRLHRIRAELQSAPHQVRYIASVAA 304 Query: 317 QWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 +WGFWH+ F+ Y++LF E P TL + Sbjct: 305 KWGFWHMSLFSRYYRELFGETPIETLSRSR 334 >UniRef50_Q1H3X2 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria RepID=Q1H3X2_METFK Length = 339 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 88/330 (26%), Positives = 146/330 (44%), Gaps = 4/330 (1%) Query: 19 ENLKLTPKVEVDNVH--QRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQV 76 + + P +H +R T+DV E A + W Q Y QL G F G T + D +Q+ Sbjct: 6 DFMGNAP-GACPFLHLVERSTSDVLEQAEALPFWSQDYTQLSKGAFSGSVTSVSCDGLQI 64 Query: 77 FREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDD 136 F E A+ Q +S+ G+P + G + + + T E T + Sbjct: 65 FTETMNQAVDQIASAPVDSYVMGLPTLVDGESTWGLLPITTNSLITLEKNAELYFKTSNI 124 Query: 137 YTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCEN 196 I V+ + A + D M + + L +Q + + Sbjct: 125 SEITAAVIPAQRLETYAAEVEWIDLSKVMEGLKPVEMLHPDIAQQLLSALQGGIQYKADI 184 Query: 197 PENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEP 256 +N+H + + D+LL L + + + R L++R R+Y L N + P Sbjct: 185 ADNIHAHQMWRNFEDDLLSTCLHTLLHVRGNIHPH-FDQRLPRYLVNRVRDYTLSNSALP 243 Query: 257 VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAM 316 +T+ +LC L VSRRTL +AF +LGI P A+++ +RL+ VR E+ + +++ A Sbjct: 244 LTIGELCKSLRVSRRTLNHAFIRVLGITPVAYIRNLRLHRVRFEMQQSPHEVISIAHLAT 303 Query: 317 QWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 +WGFWHL F+ Y++LF E P TL + Sbjct: 304 KWGFWHLSLFSRYYRELFGECPIDTLQRAR 333 >UniRef50_Q87WL8 Transcriptional regulator, AraC family n=5 Tax=Proteobacteria RepID=Q87WL8_PSESM Length = 373 Score = 279 bits (715), Expect = 9e-74, Method: Composition-based stats. Identities = 95/329 (28%), Positives = 159/329 (48%), Gaps = 11/329 (3%) Query: 20 NLKLTPKVE----VDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQ 75 N+ + P + ++ + QT D+ EH ++ WQ YDQ+ PG F GE TE D +Q Sbjct: 48 NMAINPASNQAAALPHLGRFQTCDIDEHGRNLSGWQVRYDQVTPGGFEGELTEFRSDWLQ 107 Query: 76 VFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPD 135 + R+ + AL +S + W + F +P + F L + G ELSTP Sbjct: 108 LVRDRSNQALVKSGMAWKGAIIFALPLSANGPAFCAGHTLQEPSLIVAHGENLPELSTPL 167 Query: 136 DYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCE 195 LGV + E + + + + + + L Sbjct: 168 QLDALGVAIEEGALAHALERQGSRFEITDLPKCYRL--ADPTVRTRFAALFDNLLNGEQA 225 Query: 196 NPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSE 255 + L ++R+ + D +++ + ++ A ++ + ++++ RAR+Y L ++ E Sbjct: 226 CLQKLEYDSIRRGIRDAVMLQVLELVA----PDEAPPLNPTARKKMVDRARDYALAHLDE 281 Query: 256 PVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAA 315 P+++LD+CN + SRR LQ F LGI P A+L+ +RLNA RREL S+ V+ A Sbjct: 282 PLSILDVCNHIGTSRRKLQYCFQETLGINPVAFLRTLRLNAARRELRE-SSRVELVQTVA 340 Query: 316 MQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 +WGFWHL +F++DY+ LF E PS TL + Sbjct: 341 ARWGFWHLSRFSSDYRTLFGETPSQTLQR 369 >UniRef50_A0B1I5 Transcriptional regulator, AraC family n=25 Tax=Burkholderia RepID=A0B1I5_BURCH Length = 332 Score = 277 bits (708), Expect = 4e-73, Method: Composition-based stats. Identities = 99/312 (31%), Positives = 148/312 (47%), Gaps = 4/312 (1%) Query: 32 VHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLV 91 R DV++H L I W Q+Y Q+ PG+F G T++L DD FRE T + Q+ L Sbjct: 23 FQSRSHEDVHDHGLAIAGWHQVYRQMTPGRFKGTVTQVLYDDFHFFRETTNRRVAQTGLA 82 Query: 92 WPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITR 151 +P + G Q + + G +FE TP+ ++G+ S D++ Sbjct: 83 PAGRTSLAVPLSVPLAGTFQGQPVDGYALLALRAGEDFEFHTPEGMGLVGISASSDMVDE 142 Query: 152 QANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGD 211 + + + + AL + + NP L A RK+ D Sbjct: 143 LCEAEFGAAGARRL---RHVTRLSDAQGVALGVRLSALIDDAQRNPGCLEYAATRKMFRD 199 Query: 212 NLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRR 271 +L LE+ V I+H +Y ++SR +++ + EPVTVL+LC L SRR Sbjct: 200 AMLGMFLDALEQG-IGVERRDITHATYSDIVSRCEKHLRDRPEEPVTVLELCRALRCSRR 258 Query: 272 TLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQ 331 TLQ +F + + P +L+ IRLNAVRR L + +Q + V +AA WGF HLG FA +Y+ Sbjct: 259 TLQTSFQRVADVTPVGYLRTIRLNAVRRLLRTTSAQQLGVGEAAASWGFTHLGYFAREYR 318 Query: 332 QLFSEKPSLTLH 343 LF E PS T Sbjct: 319 DLFGELPSQTTR 330 >UniRef50_B9Z415 Transcriptional regulator, AraC family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z415_9NEIS Length = 316 Score = 274 bits (701), Expect = 3e-72, Method: Composition-based stats. Identities = 88/313 (28%), Positives = 151/313 (48%), Gaps = 3/313 (0%) Query: 34 QRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWP 93 R D +HA + W Q+YDQL G+F + ++ +FRE + Q Sbjct: 5 ARCFDDAQQHAAALPYWNQVYDQLTAGRFQSSLERAHVGNLVLFREVLNQRVVQHGQTPA 64 Query: 94 NSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQA 153 + IP G + + + I G EF P + + V ++ + + A Sbjct: 65 DMLHVSIPLAMPNAGSLQGCPVNANSIMALHGNEEFVFHLPPNVDSIQVSITYEDLDTLA 124 Query: 154 NFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNL 213 +R+ Q + ++E H A + + A +NP+ L +K++ Sbjct: 125 PQF--AERLARTRNRQPVIPLREGHLAGIRATLPGAFEQVVQNPDLLEFTGTQKIIKHQF 182 Query: 214 LMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTL 273 + + +L + P ++++ ++ ++ R++ VL + EPVTVL+LC +L +SRRTL Sbjct: 183 MSLLLELLNDVAP-DERYNLTYATHSDIVKRSQAIVLASPDEPVTVLELCQKLRISRRTL 241 Query: 274 QNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQL 333 QN+F I P +L+ IRLNAVRR L S + ++++AA WGF+HLG F+ DY++L Sbjct: 242 QNSFQLIADTTPVDYLRSIRLNAVRRMLQSGSPECTSIREAAGYWGFYHLGHFSRDYRRL 301 Query: 334 FSEKPSLTLHQRM 346 F E PS T + + Sbjct: 302 FDELPSETRARAL 314 >UniRef50_C4KY56 Ethanolamine operon transcriptional activator EutR n=52 Tax=Burkholderia RepID=C4KY56_BURPS Length = 342 Score = 274 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 115/308 (37%), Positives = 162/308 (52%), Gaps = 5/308 (1%) Query: 37 TTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSF 96 D E A + W+Q YDQL G+F G TE+ LD ++VFRE T LRQ+C V +++ Sbjct: 34 AHDADEQARNLIGWRQTYDQLAAGRFVGTLTELPLDTMKVFRETTSHTLRQACEVRGDAY 93 Query: 97 WFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFL 156 WFGIP R I ++ + + +A RPG EFEL TP ++I GVV+ V+ R A + Sbjct: 94 WFGIPLARDGAARIDARPIAADALAFRPGNVEFELLTPAQFSIYGVVVRGAVLRRYAQEV 153 Query: 157 HNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMA 216 + L + V E L + Q L + +P D Sbjct: 154 ERCG-LDERLPLVPVVRVGEARLTRLCALLAQRLDD-ADAMSAAGEPLSDCARNDLQAEV 211 Query: 217 MGAMLEEAQPMVTAESISHQSYRR-LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQN 275 + A+ + S+ H S RR +++ AR+YVL + S PV V +LC QLHVSRRTLQ Sbjct: 212 LAALFDLCASPAADASVEHSSRRRKIVAAARDYVLAHRSRPVGVPELCEQLHVSRRTLQY 271 Query: 276 AFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFS 335 F +LG+ P +L+ +RLN VRR+L + S+ WGFWHL QFATDY+++F Sbjct: 272 CFQDVLGMAPATYLRALRLNGVRRDLRGRAAASVQDAA--AAWGFWHLSQFATDYRRMFG 329 Query: 336 EKPSLTLH 343 +PS TL Sbjct: 330 ARPSETLR 337 >UniRef50_Q5P5Q4 Probable regulatory protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5Q4_AZOSE Length = 342 Score = 273 bits (698), Expect = 7e-72, Method: Composition-based stats. Identities = 93/321 (28%), Positives = 149/321 (46%), Gaps = 2/321 (0%) Query: 24 TPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGL 83 TP+ + + T D +HA ++ W Q Y QL G F GE EI + IQVF+E Sbjct: 11 TPRRRNERISIISTDDPCQHAASLRDWSQDYLQLSKGAFSGEIVEISVGPIQVFKETIYQ 70 Query: 84 ALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVV 143 + + NS+ G+P + E G+ + L + T E TP + TIL V Sbjct: 71 CVDEKANPRCNSYTVGVPVSVTENGYWQGRHLERDSLITLRPNEELHFRTPRESTILVTV 130 Query: 144 LSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQP 203 + D V ++ +A + + + LA+ PE Sbjct: 131 IDCTAFDAFVRDTAGVD-VSRLIAPSNAAGLPADVAQSYRVTLGTVLASVAATPEIFEHQ 189 Query: 204 AVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLC 263 A K + + ++ A L+ P+ + +H R ++ RAR Y++ N P TV +L Sbjct: 190 ASAKSVAETVMSASRNALQAKSPLNESPRTTHAVQRAIVERARSYIVVNRENPPTVAELS 249 Query: 264 NQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHL 323 + L +SRR L +AF +LGI +L+ +RL+ VR+EL+ +V A +WGFWH+ Sbjct: 250 SYLKMSRRGLHHAFVNVLGINVATFLRYVRLHGVRKELLRAGPTD-SVSSIACKWGFWHM 308 Query: 324 GQFATDYQQLFSEKPSLTLHQ 344 G F++ Y+ LF E PS T+ + Sbjct: 309 GMFSSYYKSLFGETPSTTMRK 329 >UniRef50_B7KJD4 Transcriptional regulator, AraC family n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KJD4_CYAP7 Length = 319 Score = 269 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 76/311 (24%), Positives = 139/311 (44%), Gaps = 2/311 (0%) Query: 32 VHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLV 91 + + DV E W + Y QL G L IQ + + L+LR Sbjct: 6 IDSIECHDVDELTEAARHWTEEYLQLGTGSLKTLIDIAQLGGIQFVSQLSNLSLRACGQT 65 Query: 92 WPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITR 151 P + GIP + + + ++A E L+ + L + + ++ + + Sbjct: 66 PPKTISIGIPVNCEDHLVWYGRIIPPGQVALAYSCVENYLTFLGETKFLIISVDQETLLK 125 Query: 152 QANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGD 211 +A + + + + + AA+ ++Q +PE + ++ ++ Sbjct: 126 EAEAMGRTEIISFLEGKYHLIYPDPVALAAIKNYLQDLWQLVKISPEQAIEIRMQNLIHR 185 Query: 212 NLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRR 271 + + + + S S + L+ +A E++ +N+ +P+T+ DL L VS R Sbjct: 186 DFIPLFLNLFPCDKGQNPKVSFSKRYI--LVRKAEEFIKDNLHDPLTLQDLYEHLQVSER 243 Query: 272 TLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQ 331 TL+ +F LG+ P +LK+ RLN VRREL + + + + A +WGFWH+GQF+ DY+ Sbjct: 244 TLRYSFQDCLGVSPMTYLKKQRLNGVRRELKASYGTPVKINQIAARWGFWHMGQFSQDYK 303 Query: 332 QLFSEKPSLTL 342 +LF E PS TL Sbjct: 304 KLFGEFPSQTL 314 >UniRef50_A6W073 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W073_MARMS Length = 322 Score = 268 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 89/323 (27%), Positives = 165/323 (51%), Gaps = 12/323 (3%) Query: 26 KVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLAL 85 + + + ++T D+ EHA ++ W+ YDQ+ G+F G TE+ L +Q+ R+ + A+ Sbjct: 10 QPQSP-LSFKETIDIEEHAGNMSGWKVRYDQISAGQFAGSITELNLTGMQLIRDKSNQAI 68 Query: 86 RQSCLVWPNSFWFGIPAT-RGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVL 144 +S P++ F +P E + + + EL TP + ++ + Sbjct: 69 IKSGESIPDTIMFTLPLAPAAENLYCEGHIFTPSNLLVSNWRNLPELKTPANLDVICINA 128 Query: 145 SEDVITRQANFLHNPDRVLHMLRNQSALEVKE-QHKAALWGFVQQALATFCENPENLHQP 203 S+D++ N L + +L + + ++ + ++ L ++ + P L Sbjct: 129 SQDLLQ---NALDRQNIILDLSDSAHCYQLDKIGNQDELLTLLKTVMTPNNLQP-LLEHE 184 Query: 204 AVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLC 263 A+RK + D LL + ++ E + ++ + +R++ +AR+YVL N+++ +++DLC Sbjct: 185 AIRKGIRDTLLQNLLELINEEEVQY----LTSLARKRIVDKARDYVLANINDNPSIVDLC 240 Query: 264 NQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHL 323 N + SRR LQ F LGI P +L+ IRLN+ REL+ V++ A +WGF HL Sbjct: 241 NAVGASRRKLQYCFQETLGINPVTYLRTIRLNSAHRELLMQDGTKQ-VQNIAAKWGFLHL 299 Query: 324 GQFATDYQQLFSEKPSLTLHQRM 346 +FA DY+QLF E PS T+ ++ Sbjct: 300 SRFANDYKQLFGELPSDTIKRKQ 322 >UniRef50_C4I2G6 Transcriptional regulator, AraC family n=26 Tax=Burkholderia RepID=C4I2G6_BURPS Length = 344 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 99/314 (31%), Positives = 147/314 (46%), Gaps = 8/314 (2%) Query: 32 VHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLV 91 R DV++H L I W+Q+Y Q+ PG+F G T++L DD FRE T + Q+ + Sbjct: 35 FQSRSLEDVHDHGLAIAGWRQVYRQMTPGRFRGTVTQVLYDDFHFFRETTNRRVAQTGVS 94 Query: 92 WPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITR 151 +P G Q + + G +FE TP+ ++G+ + D+I Sbjct: 95 PEGRTSLAVPLLAPLSGTFQRQHVDGYALLALRPGEDFEFHTPEGMRLVGISAAPDMIEE 154 Query: 152 --QANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVL 209 +A F R + + + AAL + + NP L RK+ Sbjct: 155 LCEAEFGTRGHRA-----PRHVTRLTHEQGAALGARLSSYIDDAQRNPTWLAYDGTRKMF 209 Query: 210 GDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVS 269 D +L L A I+H +Y ++ R Y+ EPVTVL+LC L S Sbjct: 210 RDAMLGVFLDALSGAV-GEERRDITHATYSDIVGRCERYLRARPEEPVTVLELCRALRCS 268 Query: 270 RRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATD 329 RRTLQ +F + + P +L+ IRLNAVRR L + + ++ V +AA +WGF HLG FA + Sbjct: 269 RRTLQTSFQRVADVTPVTYLRTIRLNAVRRLLRTTSADALCVGEAAARWGFTHLGYFARE 328 Query: 330 YQQLFSEKPSLTLH 343 Y+ LF E PS T Sbjct: 329 YRGLFGELPSQTRR 342 >UniRef50_A0B2C1 Transcriptional regulator, AraC family n=17 Tax=Burkholderia RepID=A0B2C1_BURCH Length = 320 Score = 264 bits (674), Expect = 4e-69, Method: Composition-based stats. Identities = 85/313 (27%), Positives = 145/313 (46%), Gaps = 4/313 (1%) Query: 32 VHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLV 91 +HQR D HA + W Q YDQ+ G + +LD +Q+F+E + + Q + Sbjct: 4 LHQR-FDDADRHAEALRGWNQRYDQIGSGAYRSAVKHAVLDGVQLFQETANVRIIQRGCL 62 Query: 92 WPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITR 151 FG+P T G + I GG FEL +PDD +++GVV+ +++ + Sbjct: 63 PHGHTVFGMPLTGSGTFAFGGARIERGTIVMARGGIPFELHSPDDMSLIGVVVEPELMQQ 122 Query: 152 QANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGD 211 + R+ +EV + + L P+ + + Sbjct: 123 IED--AADVRLDARALRHGVVEVPVAARERASVQLATLLERVLSAPDTFDAARAQCAIRA 180 Query: 212 NLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRR 271 ++ + +L P + ++H + ++ R +YV+E+ PV +L LC QL VSRR Sbjct: 181 DVGNVLVDLLTYRMPE-PSNRLTHACHADIVRRVHDYVIEHPEAPVDILSLCTQLRVSRR 239 Query: 272 TLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQ 331 T+QN+F +++ P + + +RL VRR L+ + + +AA +WGF HLG FA+ Y+ Sbjct: 240 TMQNSFQSVVQTSPLNYTRSLRLAQVRRLLLDTRQSDLPISEAAARWGFLHLGHFASVYK 299 Query: 332 QLFSEKPSLTLHQ 344 F E PS T + Sbjct: 300 AQFGELPSATARR 312 >UniRef50_A1SRM6 DNA-binding helix-turn-helix domain-containing transcriptional regulator protein AraC family protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRM6_PSYIN Length = 351 Score = 259 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 86/314 (27%), Positives = 147/314 (46%), Gaps = 10/314 (3%) Query: 37 TTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSF 96 T DV + A ++ W+Q Y+Q G+F G E+ L I +F E+T L Q C V NS Sbjct: 22 TFDVNQQAESLIKWEQRYNQHSSGRFSGYLDELKLGGIHLFEEFTNQTLLQQCCVKENSL 81 Query: 97 WFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQ---- 152 W G I + + + ++ RP G +FEL TP D+ I G+VL + + Sbjct: 82 WIGFSLQAQRPK-INNNKIAAGQLMMRPSGVDFELMTPQDFHIFGLVLDGKSLQDEMVEF 140 Query: 153 --ANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLG 210 + +++L N + + L G A F P + + L Sbjct: 141 DAERWQSQKNKILVSEPNHYMIYELAKLIQLLLG--NNHYAAFQNRPSDESNRSRLNKLM 198 Query: 211 DNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSR 270 +L + +L + + V + Q+ ++++S Y+ + P+T+ +LC HVSR Sbjct: 199 PLILSRIADLLAQIESGVKELQVQPQTKQKVISAVSRYIKQTNRYPLTITELCKITHVSR 258 Query: 271 RTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDY 330 R L F LG+ P +++ RLN +RR L+ ++ + + D A+ +GF+H+ F Y Sbjct: 259 RALHYCFEQGLGVSPIQYIRDCRLNEIRRILLRDETEVI-ISDLALDFGFFHISTFNAHY 317 Query: 331 QQLFSEKPSLTLHQ 344 +QLF E P+ T+ + Sbjct: 318 KQLFEETPTQTIQR 331 >UniRef50_C4KAZ9 Transcriptional regulator, AraC family n=1 Tax=Thauera sp. MZ1T RepID=C4KAZ9_THASP Length = 345 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 95/317 (29%), Positives = 148/317 (46%), Gaps = 8/317 (2%) Query: 36 QTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLD-DIQVFREYTGLALRQSCLVWPN 94 Q DV + + AW Y+QL PG F G E+ +D ++V E ++ + Sbjct: 28 QVGDVSDFGRGLLAWNATYEQLAPGCFEGGAEELWIDDGLEVLWETGNRSVWTAGSNRAG 87 Query: 95 SFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQAN 154 GIP G G + ++ PGG +FE+ + + I+ +SE ++ A Sbjct: 88 MVSLGIPVAGGGAGMYCGVPIQDGAVSWLPGGGDFEIFSRERMDIVSATVSESLLCGFAA 147 Query: 155 FLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLL 214 + R + L+ + + L + + + P L PA R + D +L Sbjct: 148 --SDSPRTAEASLQRPFLQQQPRRAGMLRRALIEIVVVARRQPGLLEIPASRAAMRDCVL 205 Query: 215 MAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQ 274 M L+ A TA+ + ++ + RE LE SEP+ + D+C L VSRR+LQ Sbjct: 206 SLMLDTLDRASERPTAD-LRPSVKAWIVRKVRELALERPSEPLQIADICRSLAVSRRSLQ 264 Query: 275 NAFHAILGIGPNAWLKRIRLNAVRRELI-SPWSQSMTVKDAAMQWGFWHLGQFATDYQQL 333 AF ++G+G +L+ +RLNAVRREL + S + A +WGFWH+ +FA Y+ L Sbjct: 265 YAFEDLVGMGAVEFLRNVRLNAVRRELRVATGSPDEPIAAIAARWGFWHMPRFAAYYRAL 324 Query: 334 FSEKPSLTLHQRMREWG 350 F E PS T R RE G Sbjct: 325 FGELPSET---RRREGG 338 >UniRef50_B1Z491 Transcriptional regulator, AraC family n=6 Tax=Burkholderia cepacia complex RepID=B1Z491_BURA4 Length = 342 Score = 256 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 99/330 (30%), Positives = 141/330 (42%), Gaps = 7/330 (2%) Query: 22 KLTPKVEVDNVHQRQTT-DVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREY 80 ++ P + ++R T DV HA W DQL PG F G EI D +Q+ RE Sbjct: 16 QVDPTLGATLFNRRFTCNDVDSHAECTHGWSIRLDQLSPGPFQGTLHEIRFDGMQLLRER 75 Query: 81 TGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTIL 140 AL + S F IP G+ G L + G + EL TPD ++ Sbjct: 76 VNRALLKRGDQRAGSTSFSIPLETAGAGYCGGTPLRDKALLVSGGTSLPELRTPDHQDVV 135 Query: 141 GVVLSEDVITRQA---NFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENP 197 + + D + A + + D + S + V AL + + Sbjct: 136 LLTVPTDTLRTLAWLADEDDDGDCTGTLSNETSIVRVPAARYDALTSLLVAGFDAVDTSE 195 Query: 198 ENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPV 257 P RK L D +L+ + LE A V + + + + + P+ Sbjct: 196 RPFALPQARKTLRDAILVELVDALEAAGRPVRLDPSARRRVVERVRELV---VSQPDAPL 252 Query: 258 TVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQ 317 TVLD+C + SRR LQ F ILG P +L+ +RLN VRREL S +V D A + Sbjct: 253 TVLDVCRAVGASRRKLQYCFEEILGTHPAWYLRVLRLNGVRRELREQSPSSASVSDVACR 312 Query: 318 WGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 WGFWHL +FA Y++LF E PS TL + R Sbjct: 313 WGFWHLSRFAAHYRELFGELPSDTLKRPPR 342 >UniRef50_C6XCD3 Transcriptional regulator, AraC family n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCD3_METSD Length = 344 Score = 256 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 87/317 (27%), Positives = 142/317 (44%), Gaps = 9/317 (2%) Query: 28 EVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQ 87 + +QT D A + W Q Y QL G F G +E+ L D+ +F EYT L Q Sbjct: 32 TSSLIQHQQTGDFEHQASLLKGWNQDYLQLSAGAFEGYVSELYLRDMHLFLEYTNQVLYQ 91 Query: 88 SCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSED 147 S + + G+P R F GS C A + G FE + + + + + + Sbjct: 92 SGHLGEDVIAIGVPLQRPHGMFCGSTC-QPAAVHLYSGNQGFEYISAQETLVGVLTIKRE 150 Query: 148 VITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRK 207 V+ A +++++++ L V E L ++ PE A + Sbjct: 151 VLL-AALCPDEQAQLMNVIKQARLLPVSESAWIKLCTYLSGTFERLATTPELADSTAFLE 209 Query: 208 VLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLH 267 + + + + + P A + ++++ RE V + ++ +TV DLC +L Sbjct: 210 SVR---MAGLEVIADCLLPAAEAIHVPGAKSWKMITEVRELVSQPDTQALTVADLCQKLG 266 Query: 268 VSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFA 327 SRR+LQ F L I P A+L+ RLN VRR L + +V +AA WGFWH G F+ Sbjct: 267 TSRRSLQYHFEQALDISPIAFLRAERLNGVRRMLKTAN----SVTEAATHWGFWHFGHFS 322 Query: 328 TDYQQLFSEKPSLTLHQ 344 +Y+++F E PS T + Sbjct: 323 QEYKKMFGELPSTTFRR 339 >UniRef50_A5EM40 Transcriptional regulator, AraC family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EM40_BRASB Length = 348 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 93/336 (27%), Positives = 145/336 (43%), Gaps = 12/336 (3%) Query: 18 PENLKLTPKVE-----VDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLD 72 PE L + P+ + RQ+ D + ++ W+ QL PG+ E + LD Sbjct: 8 PEGLSVPPESQPLQTFAPRFVLRQSEDALDQVKSLGGWKIRLQQLSPGRLKAEVAGLHLD 67 Query: 73 DIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELS 132 +IQ RE T AL + + F P G++ +G + GG + Sbjct: 68 NIQFIRERTTQALLKEVETGDDQIVFSQPLQASGPGYVNGHMIGYPDPCLLGGGILPSIR 127 Query: 133 TPDDYTILGVVLSEDVITRQANFLHNPDRVLHML--RNQSALEVKEQHKAALWGFVQQAL 190 TP + + + + + R L + ++ R + L+++ + + Q Sbjct: 128 TPQYLDVASLAVDKAHLLRWLTELGESELADTLISKRQLACLQLEPTSLSIVKDVSLQLC 187 Query: 191 ATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVL 250 L R+ L D+LL A + + S RRL RARE VL Sbjct: 188 GDSGITERVLDFEQCRRTLEDDLLHAF---MRSLRVSRRRSLTSLTLQRRLADRARELVL 244 Query: 251 ENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSM- 309 T+ DLC QL VSRR+LQ+ F G+ P +L+ +RLNAVRREL + S+ Sbjct: 245 ACPDAAPTISDLCRQLGVSRRSLQDGFQGAFGLAPTQFLRVVRLNAVRRELRALAGNSVQ 304 Query: 310 -TVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 ++ D A +WGFWH +F + Y+ LF E PS T + Sbjct: 305 PSIGDIAARWGFWHWSRFTSYYRGLFGELPSETFRR 340 >UniRef50_A9AKQ9 AraC family transcriptional regulator n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9AKQ9_BURM1 Length = 321 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 94/315 (29%), Positives = 148/315 (46%), Gaps = 9/315 (2%) Query: 35 RQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPN 94 + D+ + + ++Q YDQL PG F G EI L + VFRE + RQ P Sbjct: 9 FHSDDIDGLSEHLRSFQWRYDQLDPGTFLGRIAEIDLPGVTVFREQLSRSTRQVGTTPPG 68 Query: 95 SFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQAN 154 + +P + + + + + E E T + V++ D I A Sbjct: 69 TLGLALPWNQSGEIWANGVRMTEGYVGV-SAYAEVEFFTASESDFAYVLIDSDAIDHAAA 127 Query: 155 FLHNPDRVLHMLRNQSALEV-KEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNL 213 + LR+ + + + E K AL A PE LH R++L D Sbjct: 128 RTGVA--LPRDLRDSATIALLPEGAKLALRQLFAVAHGRLGAPPETLHSDVARRLLADQF 185 Query: 214 LMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTL 273 ++ + ++A S R++ RARE + + +P+++LD+C Q+ VSRR L Sbjct: 186 VLEFIEVFSSG---ISATERSVAFRTRMVKRAREVMHGHTEDPLSILDVCKQVGVSRRKL 242 Query: 274 QNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQL 333 F +LG P A+++ IRLN RRE++ ++ +V + A +WGFWH G+FATDY++ Sbjct: 243 NYCFQDVLGTTPLAYMRAIRLNGARREML-ACARGDSVSEIAGKWGFWHFGRFATDYKRH 301 Query: 334 FSEKPSLTLHQRMRE 348 F E PS TL QR RE Sbjct: 302 FGELPSQTL-QRGRE 315 >UniRef50_A0Y3G2 Transcriptional regulator, AraC family protein n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0Y3G2_9GAMM Length = 319 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 107/330 (32%), Positives = 156/330 (47%), Gaps = 16/330 (4%) Query: 19 ENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFR 78 ++L P+ + T D+ E A + WQQ YDQ+ G F G + +I VF Sbjct: 4 QHLSNAPQK-----SKVDTHDIDEQASNLINWQQKYDQVSEGGFFGCIEGVAHSNIHVFE 58 Query: 79 EYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYT 138 EYT ALRQ C++ NS W GIP T E G L S + R ++FEL TP+ + Sbjct: 59 EYTERALRQQCVIADNSIWLGIPKTSCESKINGLDVL-SNQFMCRSSHSDFELITPEKFN 117 Query: 139 ILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPE 198 I GVV++ I A L + L V + + Sbjct: 118 IYGVVINWQSIECMA-QLQGINLQNMNAFGAERLTVNNPTLNRARSIINSM---VNHDAH 173 Query: 199 NLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVT 258 L+ +++L ++A+ + E+Q A S H+ + ++ + + ++ + VT Sbjct: 174 GLNANLQQEMLY---MLALNLLKTESQQHSIAPSYKHR--KAVVDKVKAHIKVDPQSTVT 228 Query: 259 VLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQW 318 + LC HVSRRTLQ +F +ILGI P +L+ RLN VRREL Q+ + A W Sbjct: 229 ITQLCELTHVSRRTLQYSFESILGINPLRFLRLTRLNNVRREL-KVVGQTKPISVIAANW 287 Query: 319 GFWHLGQFATDYQQLFSEKPSLTLHQRMRE 348 GFWH GQF DY QLF E PS T+ ++E Sbjct: 288 GFWHAGQFTKDYTQLFGENPSQTIANTLKE 317 >UniRef50_A5EB19 Transcriptional regulator, AraC family n=2 Tax=Bradyrhizobium RepID=A5EB19_BRASB Length = 325 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 93/320 (29%), Positives = 155/320 (48%), Gaps = 8/320 (2%) Query: 32 VHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLV 91 + Q + DV EH + W+ YDQ+ G F G FT I L +Q+FRE T +RQ + Sbjct: 1 MVQTTSADVDEHCAQLGGWRLTYDQISAGAFRGSFTLISLPRLQIFREVTSQQVRQYGRL 60 Query: 92 WPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITR 151 + F G+ G + + + + + TP + + G+ LS +I Sbjct: 61 DADCFSVGLAWHSGGPLSLNGTGITQDALVV-SFDADIDFCTPRAFELRGMTLSTQLIEA 119 Query: 152 QANFL--HNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVL 209 A L P + H +R A+ L + A E LH + + L Sbjct: 120 IAGQLAIELPADLKHRMR---AIAAPADALRRLRAALAAMDAVLGAPEEFLHDTTISEAL 176 Query: 210 GDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVS 269 D+LL+A+ +L +A+ T+ S + + +R++++A E +L + +P+++LD+C + S Sbjct: 177 QDSLLLAITDLLPDARLCDTSRSAA--ARKRIVAQATEMMLASSDQPLSLLDVCKAVGAS 234 Query: 270 RRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATD 329 RR L F +LG P ++ + IRLN VRR+L S + D A++ GFWH QF+ D Sbjct: 235 RRKLSYCFQDVLGTSPVSYWRAIRLNRVRRDLKSRRDPRDGIYDIAVRHGFWHFSQFSLD 294 Query: 330 YQQLFSEKPSLTLHQRMREW 349 Y++ F+E PS TL + + Sbjct: 295 YKRHFAELPSETLRRARMDA 314 >UniRef50_C6QHZ1 Transcriptional regulator, AraC family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QHZ1_9RHIZ Length = 337 Score = 251 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 85/326 (26%), Positives = 150/326 (46%), Gaps = 15/326 (4%) Query: 24 TPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGL 83 P E +H T+D+ E A + W Q Y+Q+ G+F+G F E +D +Q+FRE T Sbjct: 14 VPAGETAIIHAASTSDIDEQAALLRGWNQTYEQISAGRFNGSFLETQIDCVQLFREVTSN 73 Query: 84 ALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVV 143 +L+Q+ + + G P + + ++ G +FE +P I+G V Sbjct: 74 SLQQTGALPEGTIAVGAPLSLHGSATFCGRSCNGQQLHVFSGKDQFEFFSPRGLDIVGFV 133 Query: 144 LSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCE---NPENL 200 L E + D + ++ + + ++ AAL ++ CE P+ Sbjct: 134 LDESDLRSALTH----DELEDVMPSLAIPHLRFADIAAL-NRMRSIFLDVCEILAEPDAS 188 Query: 201 HQPAVR-KVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTV 259 + VR + +L+ A+ + L + ++ ++ AR+ + E + + Sbjct: 189 ARDRVRLSSMSRDLIAAIVSGLAHGYGDRFDVPQARRAL--IVRDARDLISEWSQDLKGI 246 Query: 260 LDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWG 319 DLC +L VSRR LQ +F LG+ P+ +++ +R+N RR + + +V +AA WG Sbjct: 247 ADLCRELGVSRRALQQSFQDTLGVKPSVYMRAVRMNGARRAIKTES----SVAEAATLWG 302 Query: 320 FWHLGQFATDYQQLFSEKPSLTLHQR 345 FWH G+FA DY +F E PS + Sbjct: 303 FWHFGRFARDYNMMFGELPSEAFRRY 328 >UniRef50_C3KB89 Putative AraC family regulatory protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KB89_PSEFS Length = 313 Score = 251 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 85/309 (27%), Positives = 137/309 (44%), Gaps = 4/309 (1%) Query: 35 RQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPN 94 R D HA +I W+Q+YDQL G ++ + Q+F+E + Q Sbjct: 6 RTFNDPQLHAGSIQGWRQVYDQLGRGCLTSGLRQLSAERFQIFQEVLDKRVVQRGFAPKG 65 Query: 95 SFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQAN 154 + G + Q +G+ + G EF L P+ + + + A Sbjct: 66 RLCVA--MSLGSAPVVQGQQVGAHNVVLLRDGEEFVLHAPEGTHFFALNVDTVRFAKLAA 123 Query: 155 FLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLL 214 F + D++ + +S + V + + + + + + K+L D LL Sbjct: 124 FELSSDQLKR-VTTRSQICVDDALLLRIRQRIYPLFRHLLQQTDPI-SACAEKMLEDELL 181 Query: 215 MAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQ 274 A + A V + L+ R +E + + P+++LDLC L VSRRTLQ Sbjct: 182 GAFLDLFSNATDEVRCRRGNFAVSAYLVKRCQELIDASGDTPLSILDLCEHLRVSRRTLQ 241 Query: 275 NAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLF 334 N+F A+ G+ P +L+ +RLNAVRR+LI+ S V D A+ GF+HL FA Y++LF Sbjct: 242 NSFQAVTGLRPVEYLRNLRLNAVRRQLIATPGGSQNVGDVAVAMGFFHLSHFAAHYRELF 301 Query: 335 SEKPSLTLH 343 E PS T Sbjct: 302 GESPSETQR 310 >UniRef50_A7JZD1 Ethanolamine operon regulatory protein n=3 Tax=Vibrio RepID=A7JZD1_VIBSE Length = 354 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 88/317 (27%), Positives = 151/317 (47%), Gaps = 14/317 (4%) Query: 28 EVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQ 87 + T D + A ++ WQQ YDQL G+F G+ E + VFRE + +LRQ Sbjct: 46 TAPMLCIHHTKDANQQAASLINWQQEYDQLSDGRFLGQIRERRFPNFHVFREDSNRSLRQ 105 Query: 88 SCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSED 147 C V W G+ A SQ ++++ R GG +FEL TP+ ++I G+VL Sbjct: 106 QCRVEEGGIWLGLSAENKPLHLNHSQ-FNASQLLLRQGGADFELMTPEQFSIYGIVLDRK 164 Query: 148 VITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRK 207 ++ L + + + + ++ L T E+ + + Sbjct: 165 LVQIIEKQLELDGI------GCNTPHLAGPTEKHIQQ-LKFYLGTLLGPTESRWSDSTHQ 217 Query: 208 VLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLE-NMSEPVTVLDLCNQL 266 V+ ++++ + ++ + IS + ++ R ++ + + + P+TV +LC+ + Sbjct: 218 VVLKDIVLELFSI----SSPSASHPISISHRQHVMRRIKQQLHDLDYRTPITVSELCDAV 273 Query: 267 HVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQF 326 HVSRRTLQ F P ++ R+RLN VRR L SP + T+ + A +GF+HLGQF Sbjct: 274 HVSRRTLQYTFEHCCNTSPKQFIHRMRLNQVRRVLQSPE-DNRTIAEIAFDFGFFHLGQF 332 Query: 327 ATDYQQLFSEKPSLTLH 343 + Y++LF E P+ T Sbjct: 333 SQSYKRLFGETPTETRK 349 >UniRef50_A1TWG5 Transcriptional regulator, AraC family n=2 Tax=Acidovorax RepID=A1TWG5_ACIAC Length = 345 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 109/326 (33%), Positives = 157/326 (48%), Gaps = 9/326 (2%) Query: 31 NVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDD--IQVFREYTGLALRQS 88 R + DV EHA ++ W Q YDQL G+F G E+ L +QVF E+T Q Sbjct: 21 RWRVRASEDVDEHADQLSDWSQQYDQLRGGRFAGRVRELWLGGPRLQVFHEHTSPPTSQQ 80 Query: 89 CLVWPNSFWFGIPATRGEQG--FIGSQCLGSAE--IATRPGGTEFELSTPDDYTILGVVL 144 C W S WFG+P R + F GS+ A+ + F L TP+D+ I GVV+ Sbjct: 81 CAPWRGSVWFGVPDARCARPLHFCGSERRTDAQRFVLRARASDGFTLRTPEDFGIYGVVM 140 Query: 145 SEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPA 204 ++ + +A+ + + + A+ V AAL ++ L PE Sbjct: 141 DQEWLRAEADAMGLRGAAVLLSSPAHAVPVDAAAHAALCATIESLLRIAEAAPEPAGT-G 199 Query: 205 VRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLE-NMSEPVTVLDLC 263 + L LL + A P V + Q L+ AR + + + V LC Sbjct: 200 RHQALVRRLLRQLCGDPAAAAPAVAPPQGAAQRRFALVMAARAWAGQPCCGDARDVDALC 259 Query: 264 NQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHL 323 LHV+RRTLQN FHA+LG P +LK +RLNA RR L + + TV++ A +WGF+H+ Sbjct: 260 RHLHVTRRTLQNHFHAVLGQSPAEFLKAVRLNACRRALRTA-APGETVQEIAERWGFFHM 318 Query: 324 GQFATDYQQLFSEKPSLTLHQRMREW 349 G F+ DY+ LF E PS TL +R + Sbjct: 319 GHFSQDYKTLFGEAPSQTLRRRAPQA 344 >UniRef50_C3KBA5 AraC family regulatory protein n=2 Tax=Proteobacteria RepID=C3KBA5_PSEFS Length = 322 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 77/308 (25%), Positives = 130/308 (42%), Gaps = 2/308 (0%) Query: 36 QTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNS 95 DV+ HA TI W Q Y QL G ++ +F E + Q+ + Sbjct: 8 HFRDVHVHAATIQQWNQDYSQLTAGCAESSLMQLTTTGCHLFLEQINQRVVQNGVAPRGK 67 Query: 96 FWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANF 155 F +P + + + + + GG EF P +L + ++ + Sbjct: 68 MCFAVPINVPGSIRMQGREVDDSSLFFLHGGEEFMFHMPMGMELLSITFERELFEQALEQ 127 Query: 156 LHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLM 215 + + +LR Q + V Q A + + + P L +L Sbjct: 128 TASAKELNRLLR-QPVIRVSPQRFARARQRLLALFSQALMYEDLDSTPDREVALEQAMLG 186 Query: 216 AMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQN 275 + ++ + S S + ++ + M +V++LC +L VSRRTLQN Sbjct: 187 ELLQLMTDPACDKHQRSPS-STRSFIVEKCHRLTTAEMINVPSVIELCERLQVSRRTLQN 245 Query: 276 AFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFS 335 +F ++ P +L+ +RLN VRR L+S + +++ DAA QWGF+HL FA +YQ+LF+ Sbjct: 246 SFRSVAETTPLNYLRSVRLNGVRRLLMSTRACELSIGDAAAQWGFYHLSHFAAEYQELFA 305 Query: 336 EKPSLTLH 343 E PS T Sbjct: 306 ELPSHTAR 313 >UniRef50_A2SJ66 Transcriptional regulator, AraC family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SJ66_METPP Length = 318 Score = 247 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 81/322 (25%), Positives = 134/322 (41%), Gaps = 16/322 (4%) Query: 36 QTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNS 95 Q+ DV + A ++ WQQ Y+QL G+F G ++++ V RE T LR+ + Sbjct: 5 QSADVDDQAQALSGWQQRYEQLGCGRFRGSARQVVMAGGTVLRESTNRQLREQIRPPSDC 64 Query: 96 FWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANF 155 IP + + L + G E+EL + +L + + R+ Sbjct: 65 LVLAIPLSVAPGSVFAGRPLDGDALMVISGHEEYELVAAGELDLLALSVDR----RRLGG 120 Query: 156 LHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAV------RKVL 209 + P+ + + R + A G V+ L C AV ++ Sbjct: 121 MLAPEEIEWLARAERQRRWALAPDTA--GAVRSQLLAVCSAAGRCAPGAVIDIENEPALI 178 Query: 210 GDNLLMAMGAMLEEAQPMVTAESISHQSYRRL--LSRAREYVLENMSEPVTVLDLCNQLH 267 G L + + + A I ++ RL + RA E++ N+ E + + ++C Sbjct: 179 GATLAHTVALAMSDGGADRGAVGIPRRADSRLRVVKRAIEFIRANLQEDIGIPEICAAAC 238 Query: 268 VSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFA 327 SRR+LQ F L P A+L+ +RLN RR L P Q +T+ AM GF F Sbjct: 239 ASRRSLQYCFEEFLHTTPQAYLRALRLNEARRRLKQPGDQPITLLACAM--GFSSASHFT 296 Query: 328 TDYQQLFSEKPSLTLHQRMREW 349 Y+ +F+E PS T +R R+ Sbjct: 297 RHYKLMFNELPSQTQRRRTRDA 318 >UniRef50_A2SII1 Transcriptional regulator, AraC family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SII1_METPP Length = 328 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 99/310 (31%), Positives = 147/310 (47%), Gaps = 16/310 (5%) Query: 33 HQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVW 92 ++TDV EHA ++ W+Q YDQL G F G E + +Q+FRE T LRQ C VW Sbjct: 25 RSHRSTDVDEHASHLSGWRQAYDQLGSGGFEGRLDEAVSAGVQLFRERTSQRLRQRCEVW 84 Query: 93 PNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQ 152 + W GI + + + +G+ + FEL +P + I+G V+S + + Sbjct: 85 QGALWCGI-TVADDGSRLDGRLVGADGVMVSGEDGGFELVSPAGHDIVGFVVSREAL--- 140 Query: 153 ANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDN 212 H P L + A + L L + V L Sbjct: 141 --QSHAPGLELPRAGGAGWWAADPARRHAALVHARAILV--------LAEAGVSCDLRSA 190 Query: 213 LLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRT 272 +L + +L+ P E + + RRL+++ RE + +V +LC LHVSRRT Sbjct: 191 MLDVVAGLLDARGPE-RRERGNASARRRLVAQVRERIEAAPDRAPSVPELCAALHVSRRT 249 Query: 273 LQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQ 332 LQ AF +G+ P A+L+ +RLN VRR L + +TV+ AA WGFW+L FA DY++ Sbjct: 250 LQYAFEDEVGVNPLAYLRSVRLNGVRRLLREA-APGLTVQRAAAHWGFWNLSAFAGDYRR 308 Query: 333 LFSEKPSLTL 342 F E+ S TL Sbjct: 309 QFGERASETL 318 >UniRef50_D1T8Q5 AraC family transcriptional regulator n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T8Q5_9BURK Length = 312 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 79/310 (25%), Positives = 133/310 (42%), Gaps = 5/310 (1%) Query: 36 QTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNS 95 TD EHA + W+Q Y QL G F G +I +D +F E + Q + Sbjct: 7 TFTDAGEHAAMLPGWEQQYFQLDCGPFQGRLQQIGVDGTHLFYESVNRRVVQQGSTPSDM 66 Query: 96 FWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANF 155 FGI + + + + EF L P + +L V + + Sbjct: 67 LVFGIVLDANSPVTFADRSVPADSMICARASREFFLHFPGETALLAVGVKLPFLAGHPEL 126 Query: 156 LHNPDRVLHMLRNQSA-LEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLL 214 R+ L N++ + + +A + ++ + +L Sbjct: 127 ---AARLESRLSNKTCVIPLAPGARAQFIAMWRYVTDEALALNACAPSELAQRRVSAQIL 183 Query: 215 MAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQ 274 + A++++ P + I+ S +++RA + +L EPVTV +LC L +SRRT+Q Sbjct: 184 DMLDALVDDGVPDEKTD-ITWMSQSDVVARAHDMILARPMEPVTVQELCESLRISRRTVQ 242 Query: 275 NAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLF 334 +F + G P +++ IRLN VR+ L S +TV+ AA +WGF+H G F DY++LF Sbjct: 243 TSFRLVTGKSPVEYMRAIRLNHVRQLLRKSSSGELTVRAAAQRWGFFHSGHFTQDYRELF 302 Query: 335 SEKPSLTLHQ 344 PS + Sbjct: 303 EAMPSDNRPR 312 >UniRef50_Q88I52 Transcriptional regulator, AraC family n=8 Tax=Pseudomonas RepID=Q88I52_PSEPK Length = 349 Score = 239 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 87/315 (27%), Positives = 134/315 (42%), Gaps = 27/315 (8%) Query: 31 NVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCL 90 V TTDV E WQQ Y Q+ PG F GE + LD ++V+ E + Q Sbjct: 58 KVQAFHTTDVTEQVRATPGWQQQYRQMSPGYFSGELRCLGLDGVEVYEERLNTRVEQFFR 117 Query: 91 VWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVIT 150 S F + + Q S I TP++Y + VV + + Sbjct: 118 APSGSLAFCFDRSENSLYLLNEQ---SRNIWI----------TPENYQEVAVVFDQAFLA 164 Query: 151 RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLG 210 R +P R+ + + + A ++ L E L + L Sbjct: 165 RHG---LDPQRLEGLF----MVPLGSGQNALFGSWLSATLTRLGEEGCPLQG----QALA 213 Query: 211 DNLLMAMGAMLEEAQPMVTAESISHQSYRR-LLSRAREYVLENMSEPVTVLDLCNQLHVS 269 + LL +L+ A + ++ + R ++ R E+ + E + +L+L + VS Sbjct: 214 EQLLEDCLFILDNASQRLQGVALGRRDEERAIMHRVSEWAADCPEETLNLLELADVAGVS 273 Query: 270 RRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATD 329 R LQ AF A G+ P WL+ RLN RR+L+ +TV + AM+W FWHLG+F+ Sbjct: 274 LRQLQQAFKAFTGMPPAHWLRLRRLNGARRDLLRGG--GVTVAEVAMRWSFWHLGRFSES 331 Query: 330 YQQLFSEKPSLTLHQ 344 Y+QLF E PS TL + Sbjct: 332 YRQLFKEFPSETLKR 346 >UniRef50_B1YYW7 Transcriptional regulator, AraC family n=5 Tax=Burkholderia cepacia complex RepID=B1YYW7_BURA4 Length = 334 Score = 237 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 82/333 (24%), Positives = 141/333 (42%), Gaps = 9/333 (2%) Query: 18 PENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVF 77 P + P V TDV E A W Y Q+ G+FHG + + L I++ Sbjct: 7 PSDFSGAP-PLARRVTFCAFTDVEEQARIFDGWHLNYTQISGGRFHGSSSIVSLGGIRLL 65 Query: 78 REYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDY 137 E + Q V + +P + + G + FE +PD + Sbjct: 66 VEDLDKVILQQGAVPSDRVAVAVPLELEGHARMCGEKSGRDSLHVFSSQPVFEFYSPDRH 125 Query: 138 TILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCE-- 195 ++ V ++ D ++ A + + L ++ A+A + Sbjct: 126 VLVNVEIAPDKLSTPALRTFAASLRARTF--APLIPMTAPVADRLRHLLRHAMAAAAKST 183 Query: 196 NPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSE 255 +++ ++L +L A+ + +P A + Y L++ A+ + + + Sbjct: 184 PADDVTTQDRIELLERTVLYAISEAMTMPEPHADALATRSTKYWSLVNAAQARLQDASTC 243 Query: 256 PVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAA 315 P+++ +LC QL +SRRT+Q AF+ L + P A+L+ +RLN VRREL V AA Sbjct: 244 PLSIAELCVQLGISRRTVQYAFNDTLNLNPIAYLRAVRLNHVRRELRLGGP----VTSAA 299 Query: 316 MQWGFWHLGQFATDYQQLFSEKPSLTLHQRMRE 348 +WGFWHL FA DY+ +F E PS T + + Sbjct: 300 TKWGFWHLSSFAQDYRAMFGELPSATARRYAQR 332 >UniRef50_A4JQI4 Transcriptional regulator, AraC family n=5 Tax=Burkholderia RepID=A4JQI4_BURVG Length = 321 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 88/311 (28%), Positives = 139/311 (44%), Gaps = 6/311 (1%) Query: 34 QRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWP 93 R +DV+ H+ I W Q YDQ+ PG + VFRE + Q L Sbjct: 14 SRCFSDVFLHSQAIVNWSQHYDQISPGIATTTLRQAAGQRFHVFRERINQRVMQHGLAPR 73 Query: 94 NSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQA 153 F +P + + + + T GG EF P D +L + + A Sbjct: 74 GRLCFALPIANTAAPIVQGRTVARPSLLTLRGGEEFVAHLPCDTEVLAFTIDRTLTADHA 133 Query: 154 NFLHNPDRVLHMLRNQSALEVKE-QHKAALWGFVQQALATFCENPENLHQPAVRKVLGDN 212 L + + Q L + +++ AL G + +VL N Sbjct: 134 --LDELANLPARVLRQPVLPISPVRYRTALDGLERVLCQALDHGSLTARDAFDERVLAHN 191 Query: 213 LLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRT 272 ++ + +++ + A S + ++ R++E LE + TV+DLC+ L +SRRT Sbjct: 192 VVGILLDLVQSDEADAGALP-SASTQSYIVRRSQEIALE-CDDVPTVIDLCHHLRISRRT 249 Query: 273 LQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQ 332 LQ +F ++G P A+L+ IRLNAVRR L++ ++M + DAA Q+GF H G+F+ YQQ Sbjct: 250 LQYSFQNVVGTTPTAYLRSIRLNAVRRFLMTT-PETMRIGDAAAQFGFCHFGRFSAYYQQ 308 Query: 333 LFSEKPSLTLH 343 F E PS T Sbjct: 309 HFHELPSHTPR 319 >UniRef50_Q46TV6 Transcriptional regulator, AraC family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46TV6_RALEJ Length = 330 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 78/299 (26%), Positives = 131/299 (43%), Gaps = 4/299 (1%) Query: 47 ITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGE 106 + WQQ Y QL PG F E +++ D+ VFRE T +L + +P + + Sbjct: 36 LDGWQQRYQQLTPGVFRAEVSQVTYGDVHVFRELTSQSLLEEGEAARGYVSLALPDVQCQ 95 Query: 107 QGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHML 166 G+ + + G + TP + G+ + + R L + Sbjct: 96 GGWFSGYAMDGQTLLCAGNGRALAMRTPLQLDLAGLTVPMPALQRAMALAGG--ETLRLE 153 Query: 167 RNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQP 226 R +V + + LAT + E V + D LL+A L Sbjct: 154 RMAPVRQVTKGASREFRAVLLSVLATAAIDAEVFSNRFVESAMRDALLLAAATALVGEGI 213 Query: 227 MVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPN 286 + + RRL++ A + + +P ++L LC +L VSRRTLQ +F+ + G+ P Sbjct: 214 DGNEPLPTIPARRRLVADAYQMIRSAPDQPWSILSLCERLGVSRRTLQYSFNEVTGLSPL 273 Query: 287 AWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 +++ +R+N VR+ L + ++ +V AA +GF HL +FA Y+ F E PS TL +R Sbjct: 274 DFVRAVRMNGVRQALRTGAAE--SVGGAAASFGFQHLPRFAAQYRAFFGELPSATLARR 330 >UniRef50_Q488C6 Transcriptional regulator, AraC family n=2 Tax=Colwellia psychrerythraea 34H RepID=Q488C6_COLP3 Length = 330 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 80/321 (24%), Positives = 139/321 (43%), Gaps = 4/321 (1%) Query: 25 PKVEVDN-VHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGL 83 P +DN V T+DV E + + Y QL G+ +G + E L D+Q+FRE Sbjct: 8 PSTTIDNNVRGISTSDVDELSQFQLNKNRRYTQLQAGQLNGAYLEANLGDVQIFRESLNA 67 Query: 84 ALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVV 143 + F + + + + GG ++ S + Sbjct: 68 GALIEAAPASSFLPFAAITSNADNFKYCGKQREKNTVLQATGG-FWDASFQHSLNFVVAA 126 Query: 144 LSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQP 203 +R L + +Q+ L K G + L PE L + Sbjct: 127 FDRKAFSRSIELLTGEEVPQAWFVSQACLTEPHALKTYACG-LDNILTIIKSRPEILKKD 185 Query: 204 AVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLC 263 V+++L D++L + +L + P+ + +S + + + +Y+ + T+ +LC Sbjct: 186 NVQRMLSDSILRLILKVLSKTTPINV-QQVSPSNRAQGVRMVIDYLHHYADQVPTIPELC 244 Query: 264 NQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHL 323 N +S R LQ F+ LGI P +L+ +RLN V+R+L+ + + D A+ WGF L Sbjct: 245 NIAKLSERNLQYGFNEYLGITPIRYLRLVRLNGVKRDLLLSHPKKDRIVDIALNWGFIEL 304 Query: 324 GQFATDYQQLFSEKPSLTLHQ 344 G+FA +Y+QLF E PS+TL++ Sbjct: 305 GRFAGEYRQLFQELPSVTLNK 325 >UniRef50_Q0K462 Transcriptional regulator, AraC-family n=1 Tax=Ralstonia eutropha H16 RepID=Q0K462_RALEH Length = 314 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 86/310 (27%), Positives = 147/310 (47%), Gaps = 4/310 (1%) Query: 35 RQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLD-DIQVFREYTGLALRQSCLVWP 93 + +H L + + Y Q PG++ G ++ D D+ V+RE + + + Sbjct: 7 QSFASPEDHRLGLPELNKRYLQTGPGRYAGHLQQVRPDADLLVYRERLDVPILREGWTRK 66 Query: 94 NSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQA 153 F I + + +G+A +A GG E+ + +P LG+VL++ + A Sbjct: 67 GLRMFAIALPVESRATFHGRAVGAA-VAHLAGGREYSVQSPGPSEHLGIVLADSTFSIHA 125 Query: 154 NFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNL 213 ++L R+ + LE + L + L +N L PA R L D++ Sbjct: 126 DYLGGVPRLAW--TGEPLLEAPAAARERLASRILCCLLGATKNVSALVCPAARMTLRDDV 183 Query: 214 LMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTL 273 L + +L +A+ I+ +Y ++ R+RE++ N PV VL+L L VSRRT+ Sbjct: 184 LEHLFCLLIDAELPGRRRDITRLTYSDIVHRSREHLRANADRPVGVLELSGLLRVSRRTI 243 Query: 274 QNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQL 333 Q AF + G+ P +L+ IRL++VRR L + +TV AA +WGF H+ +FA +Y ++ Sbjct: 244 QTAFMEVTGVTPQTYLRAIRLSSVRRLLRQTSADRLTVSQAAARWGFVHMSRFAAEYGRM 303 Query: 334 FSEKPSLTLH 343 F PS Sbjct: 304 FGCLPSEAPR 313 >UniRef50_UPI00006A2B14 UPI00006A2B14 related cluster n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI00006A2B14 Length = 303 Score = 207 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 72/305 (23%), Positives = 117/305 (38%), Gaps = 31/305 (10%) Query: 39 DVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWF 98 D + HA + W+ Y Q+ G ++ FRE + Q + Sbjct: 30 DAHLHASALQGWKNTYSQISAGALETSLMQLTSARSHAFRERISQRVVQHGETPRDKVCL 89 Query: 99 GIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHN 158 IP + + A+ R + STP I Sbjct: 90 AIPVGMRGVASVQGR---EADTIQREFFEDMLESTPHAQEI------------------- 127 Query: 159 PDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMG 218 L Q ++V + A + N + P L +L + Sbjct: 128 -----GALLRQPVIKVLPKRLAECRRRLLAMFTEAMLNDDLGETPERENELEQAMLGELM 182 Query: 219 AMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFH 278 +L + + S ++ ++ + + + N +V++LC +L VSRRT+QN+F Sbjct: 183 RLLSDPECDWHQRPPS-TTHSFIVEKCHQLTMLNAFNAPSVIELCQRLQVSRRTIQNSFR 241 Query: 279 AILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKP 338 + P +L+ +RLN VRREL+ +++V DAA WGF+HL FA DYQ+LF E P Sbjct: 242 NVTETTPLNYLRCVRLNGVRRELM---FTTLSVGDAAANWGFFHLSHFAADYQELFGELP 298 Query: 339 SLTLH 343 S T Sbjct: 299 SQTKR 303 >UniRef50_A3YU12 Transcriptional regulator, AraC family protein n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YU12_9SYNE Length = 318 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 75/297 (25%), Positives = 130/297 (43%), Gaps = 6/297 (2%) Query: 53 IYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNS--FWFGIPATRGEQG-F 109 QL G+ G L +++ R L + + +P + G Sbjct: 2 RLLQLSNGRLSGSLVIRRLGPLRLLRLQANRCLHVAGSKPLDQRLVCLNLPPSGGGAPLR 61 Query: 110 IGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQ 169 +G + E LSTP+ + V+L+ +TR ++ + D R Sbjct: 62 AHGTTIGPDVLFGLDPRAEVHLSTPEQMDLAVVMLTPSTLTRWSSGQGDRDLEAAPFR-C 120 Query: 170 SALEVKEQHKAALWGFVQQALATFCENPE-NLHQPAVRKVLGDNLLMAMGAMLEEAQPMV 228 + L + + L ++ + L E P + P+ + G LL + LE+ + Sbjct: 121 NCLPIDVDSRTQLQRWLLKLLPLQAETPSVPVVSPSAPEAAGGGLLPLLVDALEQGLR-L 179 Query: 229 TAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAW 288 + S + +++ + +++V E+ EP+++ LC Q +V RR+L F LG+GP A+ Sbjct: 180 RGVTDSPPARIQMVKQLQQWVEEHPLEPISLDGLCRQAYVGRRSLILGFKEHLGMGPMAY 239 Query: 289 LKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 K RL+ VRR L+ ++T+ A WGF + G FA DY++LF E PS TL R Sbjct: 240 FKLQRLHGVRRGLLEAAPGAVTISGLAASWGFLNPGHFARDYRRLFGELPSATLSGR 296 >UniRef50_C9PH24 Ethanolamine operon regulatory protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PH24_VIBFU Length = 277 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 76/258 (29%), Positives = 122/258 (47%), Gaps = 5/258 (1%) Query: 93 PNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQ 152 PN+ W G G Q + ++ RP FEL+TP D+ I G+V+ +++ Sbjct: 3 PNAVWIGFSMNSQRPKVNGLQA-ETHQLMIRPAQESFELATPQDFHIFGIVIDRELLLNG 61 Query: 153 ANFLHNPDRVLHMLRNQSALE--VKEQHKAALWGFVQQALATFCENPENLHQPAVRKV-L 209 F + +E V + +L ++ AL+ + L + +V + L Sbjct: 62 MQFGSQEQWENTQWETATLVENNVPQHGCWSLVDLIRDALSPQSILGQKLLEESVAQAHL 121 Query: 210 GDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVS 269 L A+ L Q E S+ + R+ L R +Y+ +N P+++ D+C VS Sbjct: 122 HAMLRTAVMDRLSAFQISTEREPRSYHTRRQALRRLYQYIEQNGDYPLSISDMCAIACVS 181 Query: 270 RRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATD 329 +RTLQN F LG+ P +L+ RLNAVRR L+ Q + D A+ +GF+H+G F Sbjct: 182 QRTLQNCFEQELGVSPATFLRECRLNAVRRVLLDQSQQRA-ICDVALDFGFYHIGTFNHY 240 Query: 330 YQQLFSEKPSLTLHQRMR 347 Y+ LF E PS T + +R Sbjct: 241 YKLLFGETPSQTRDRALR 258 >UniRef50_B4AUP2 Transcriptional regulator, AraC family n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AUP2_9CHRO Length = 382 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 66/318 (20%), Positives = 112/318 (35%), Gaps = 5/318 (1%) Query: 28 EVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQ 87 + V + D+ + + +Q PG F G+ +Q +L Sbjct: 60 KNSLVVTHEFDDIDLFTEALKPLTIVANQTSPGLFKGKINHFRFSGLQFTSISQNQSLYA 119 Query: 88 SCLVWPNSFWFGIPATRGEQGFI-GSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSE 146 F I + I + +++ ++ D I+ ++ Sbjct: 120 KGPKSSCDRTFAITFQSRQTSVIAHGIAVKKSDLFGFDLVRPVDVIVEKDTQIVLANVNL 179 Query: 147 DVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVR 206 A + + + L + Q E PE + + + Sbjct: 180 QAFESLAEKMGYEGFE---FMQNNLVSAHPATFRYLREYYGQISQLLAEKPELIGKAPFQ 236 Query: 207 KVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQL 266 ++ + L + L + Y L+ +A E L +P+T+ LCN+L Sbjct: 237 ALIRQDFLPLLLDTLGAISRRNQKVKKPFRRYS-LVKKALEIALSFPEQPLTLEQLCNKL 295 Query: 267 HVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQF 326 S L F I G+ P A++K RLN VRR L ++ TV A QWGFW F Sbjct: 296 ETSSSALAYGFQDIFGLSPIAYIKIQRLNGVRRLLKRADPKTTTVMQVAQQWGFWSFSHF 355 Query: 327 ATDYQQLFSEKPSLTLHQ 344 A DY+++F E PS TL + Sbjct: 356 ARDYKKMFGELPSQTLQK 373 >UniRef50_Q987P8 Transcriptional regulator n=1 Tax=Mesorhizobium loti RepID=Q987P8_RHILO Length = 299 Score = 184 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 63/311 (20%), Positives = 103/311 (33%), Gaps = 17/311 (5%) Query: 34 QRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWP 93 + D E ++ W+Q Y Q+ G + G ILL +++ RE + Q Sbjct: 4 ETTFHDATEQEASLPGWRQEYRQVSTGGYDGRTMAILLPGVEILRETISVGTEQMFSAPE 63 Query: 94 NSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQA 153 S F R + + D +L +VL D + + Sbjct: 64 GSMIFYYYPKRDRSELVRGEKATGVSGFALNWTNRIGFMD-ADSDLLMLVLRRDAVADE- 121 Query: 154 NFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNL 213 ++S + + F+ L + P L Sbjct: 122 --------------DRSRIAELVEPPLENAAFLADWLLSLLGGARQQSHPCAWGKFDGVL 167 Query: 214 LMAMGAMLEEAQPMVTAESISH-QSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRT 272 + E H ++ + R+ + + P +V L L VS Sbjct: 168 ADVITDRFELLFQKSLVRQTPHIAQTEQIYRKIRDRIFDAPDMPHSVKSLSRDLGVSAFN 227 Query: 273 LQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQ 332 L+ + + I + L +RLN RR+L+ V D AM WGF+H +FA Y+ Sbjct: 228 LRASCQSFTQIPLDRILMMLRLNGARRDLLHARCSPRKVSDIAMDWGFFHWSRFALRYKS 287 Query: 333 LFSEKPSLTLH 343 LF E PS TL Sbjct: 288 LFGETPSQTLK 298 >UniRef50_UPI00016AB122 ethanolamine operon transcriptional activator EutR n=1 Tax=Burkholderia pseudomallei 14 RepID=UPI00016AB122 Length = 237 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 83/236 (35%), Positives = 120/236 (50%), Gaps = 5/236 (2%) Query: 109 FIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRN 168 I ++ + + +A RPG EFEL TP ++I GVV+ V+ R A + + L Sbjct: 1 RIDARPIAADALAFRPGNVEFELLTPAQFSIYGVVVRGAVLRRYAQEVERCG-LDERLPL 59 Query: 169 QSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMV 228 + V E L + Q L + +P D + A+ + Sbjct: 60 VPVVRVGEARLTRLCALLAQRLDD-ADAMSAAGEPLSDCARNDLQAEVLAALFDLCASPA 118 Query: 229 TAESISHQSYRR-LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNA 287 S+ H S RR +++ AR+YVL + S PV V +LC QLHVSRRTLQ F +LG+ P Sbjct: 119 ADASVEHSSRRRKIVAAARDYVLAHRSRPVGVPELCEQLHVSRRTLQYCFQDVLGMAPAT 178 Query: 288 WLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 +L+ +RLN VRR+L + S+ WGFWHL QFATDY+++F +PS TL Sbjct: 179 YLRALRLNGVRRDLRGRAAASVQDAA--AAWGFWHLSQFATDYRRMFGARPSETLR 232 >UniRef50_B2I0G9 AraC-type DNA-binding domain-containing protein n=12 Tax=Proteobacteria RepID=B2I0G9_ACIBC Length = 352 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 60/250 (24%), Positives = 100/250 (40%), Gaps = 5/250 (2%) Query: 96 FWFGIPATRGEQGFIGSQC-LGSAEIATR-PGGTEFELSTPDDYTILGVVLSEDVITRQA 153 + IP + GSQ + +++A+ + + L + +S+D T Sbjct: 91 YLIQIPTQGYAEIEFGSQKFISYSQVASLISPQQSLRMRWHANSPQLILKVSKDDFTYHC 150 Query: 154 NFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNL 213 H D ++L L+ Q A V+ + + LH P K NL Sbjct: 151 RQ-HIADSENNLLVFDPKLDFSTQGGAYFLQLVRTLMDALACDQHPLHHPLAFKQFESNL 209 Query: 214 LMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTL 273 A+ + R Y+ E++ EP+ V L VS RTL Sbjct: 210 FNALIYGQPNNALHKIDYYKEKTVSPYFVKRTEAYIKEHLHEPLNVEILAEHAGVSVRTL 269 Query: 274 QNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQL 333 F LG P ++LK +R EL+ +++++V D A +WGF HLG+F+ +Y++ Sbjct: 270 FTGFKNYLGTTPMSYLKELRFEQAHLELMH--NENLSVTDVAFKWGFTHLGRFSQEYKRR 327 Query: 334 FSEKPSLTLH 343 + E PS T Sbjct: 328 YGELPSSTRR 337 >UniRef50_A1K6X6 Putative AraC-family transcriptional regulator n=1 Tax=Azoarcus sp. BH72 RepID=A1K6X6_AZOSB Length = 328 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 105/251 (41%), Gaps = 5/251 (1%) Query: 98 FGIPATRGEQGFIGSQCLGSAEIA--TRPGGTEFELSTPDDYTILGVVLSEDVITRQANF 155 +P + ++ I L S + ++ D T V + D + R A+ Sbjct: 81 IQVPLSGRDRMRIDGAELDSDPRHATVHAPHSGLTMNWSGDCTKFVVRIERDALERHASA 140 Query: 156 LHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLM 215 L D V + + +++++ + Q NP QP V + LL Sbjct: 141 LAGRD-VSRTIAFCNRVDLQDPMARSWVSTAQHLFGELRSNPALADQPLVSNHIEQLLLT 199 Query: 216 AMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQN 275 L + T+ + R + RA E + +P+T+ L + VS RTL + Sbjct: 200 TALNWLPGSFANATSGG-ARLVLPRHVRRAEELMRGCPEQPITMESLAAHVGVSARTLYD 258 Query: 276 AFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFS 335 F LG+ P +L+ +R+ R +L+ P +Q +V A WGF+ LG+FA DY++ + Sbjct: 259 GFRNFLGVSPMRYLRDLRMERARADLLDP-AQPASVTTIATHWGFFQLGRFAADYRRRYG 317 Query: 336 EKPSLTLHQRM 346 E P T+ +R Sbjct: 318 EHPRETMARRA 328 >UniRef50_D1T5H4 AraC family transcriptional regulator n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5H4_9BURK Length = 328 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 56/227 (24%), Positives = 93/227 (40%), Gaps = 9/227 (3%) Query: 121 ATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKA 180 + G + +L ++ L + + D++ RQA R + +A+ + Sbjct: 108 SVLNAGQQIQLVHGENTEKLILRIERDLLERQAAQYLG-HRGPKQVEFDTAMPLDTAVGQ 166 Query: 181 ALWGFVQQALATFCENP---ENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQS 237 V + L + +++ LL + + L E + Sbjct: 167 RWARTVSWLIDYLGGEDIPNSPLIDAQIEQMMVSLLLASQHSNLSEGRIGD-----ERTV 221 Query: 238 YRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAV 297 + RA ++ EN +P+ V D+ + VS +L F P +LK +RL V Sbjct: 222 APAFVRRAEAFIEENAHKPIAVSDIAEHVGVSTSSLYAGFRKYRNSSPMIFLKEVRLQRV 281 Query: 298 RRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 R +L S + +TV A QWGF HLG FATDY++ F E PS TL + Sbjct: 282 REQLRSCNAGQVTVTSVAHQWGFAHLGHFATDYKRRFGESPSETLAR 328 >UniRef50_D1SW59 Transcriptional regulator, AraC family n=5 Tax=Proteobacteria RepID=D1SW59_9BURK Length = 341 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 63/296 (21%), Positives = 114/296 (38%), Gaps = 9/296 (3%) Query: 53 IYDQLHPG-KFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIG 111 Q PG + + L D+ V R G A+ + F +P + + G Sbjct: 52 RLAQAAPGERLDARMHYVSLGDVSVSRLRYGAAVEIQPGPLESFFLVQMPLSGHARIDSG 111 Query: 112 SQCL--GSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQ 169 + + G + + + L + ++ + R H + LR + Sbjct: 112 GRQVESGPGTASVLSPNDDTRMQWASGTDQLMLRIARAQVERTL-VGHLGRPLDEPLRFE 170 Query: 170 SALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVT 229 ++ + L + P+ V + + L + + T Sbjct: 171 LGFHWQDCAP--WRCLLSYLLDCATQYPDLSQNKLVVAQI-EQLACLILLTSHQHNHSET 227 Query: 230 AESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWL 289 A + R + RA++Y+ + EPV V L VS R+L F LG+ P +L Sbjct: 228 APARRSTILPRHVRRAQDYLQAHAHEPVCVEQLAEVAGVSVRSLYAGFKEFLGVSPMQYL 287 Query: 290 KRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 + +R+ VR EL+ ++ V A++WGF HLG+F+ +Y+Q + E PS TL + Sbjct: 288 RDLRMEHVRTELL--GGEASNVAGIALRWGFAHLGRFSNEYKQRYGESPSQTLRRH 341 >UniRef50_D0LFC4 Helix-turn-helix-domain containing protein AraC type n=2 Tax=Actinomycetales RepID=D0LFC4_GORB4 Length = 318 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 66/287 (22%), Positives = 110/287 (38%), Gaps = 23/287 (8%) Query: 65 EFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRP 124 + LD + + R G A+ +C +P ++ IP T G E+ + P Sbjct: 46 TMRTVELDGVTIGRLTWGTAVSIACE-YPGAYEVNIPLTGRLHSR-----SGRDELVSTP 99 Query: 125 G-GTEFELSTP-------DDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKE 176 G GT F D ++GV + + R+A+ +H + L ++V+ Sbjct: 100 GTGTVFTAGRASVITNWTADCEVIGVKFDAEYLEREADRIHATA-LRRRLTLPDQIDVQS 158 Query: 177 QHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQ 236 A +G V+ A E + L P V L + A + E Q Sbjct: 159 DSGATWFGLVKALSAQVREPGDLLANPLVGPQLASAVSTAFLLSVS-----PEPERADPQ 213 Query: 237 SYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNA 296 ++ R + + E+ + P ++ ++ S R LQ AF L P L IRL Sbjct: 214 LRPGMVKRVLDALDEDPARPWSLAEMAGIAGTSVRRLQEAFAEYLERSPTRALADIRLAR 273 Query: 297 VRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 +L++ TV D A +WGF +FA Y++ + PS L Sbjct: 274 AHADLLTGTG---TVADVAARWGFSSPSRFAAAYRRRYGASPSAVLR 317 >UniRef50_D2BF03 AraC family transcriptional regulator n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2BF03_STRRD Length = 329 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 109/287 (37%), Gaps = 4/287 (1%) Query: 61 KFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQ-CLGSAE 119 + F L +++ G +R + F IP G Q + + Sbjct: 45 RLAARFHSAQLGGVRINYLDYGTDVRIEPGELESFFLVQIPLAGRSLIRCGGQEIVSTPL 104 Query: 120 IATRPGGTE-FELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQH 178 +A+ P +E ++ L V + + +R+ L L++ Sbjct: 105 LASLPSPSEHLDMRWEAGCPQLIVKFDRTAVEGALEQMLG-ERLDRPLVFDLGLDMTAGW 163 Query: 179 KAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSY 238 A + QP L + +L ++ M ++ + Sbjct: 164 ARAWRAMTDLIIGEAEHGDGLAVQPLAIAHLENAMLSSLLTMQPSNYR-ARLDAPRPPAV 222 Query: 239 RRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVR 298 +++ RA E++ + +P+T D+ + VS R+LQ F LG+ P +L+ +RL V Sbjct: 223 PKVVRRAMEFIDGHAHQPLTTDDVARAVAVSGRSLQEGFRRHLGLTPMTYLRDVRLGRVH 282 Query: 299 RELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 EL++ TV A +WGF H G+FA Y+ + + PS TL R Sbjct: 283 EELVTGDPARCTVTGVAARWGFLHQGRFAAAYRARYGQAPSHTLRGR 329 >UniRef50_Q3LUX0 Transcriptional activator (Fragment) n=2 Tax=Pseudomonas fluorescens RepID=Q3LUX0_PSEFL Length = 330 Score = 170 bits (430), Expect = 8e-41, Method: Composition-based stats. Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 5/254 (1%) Query: 95 SFWFGIPATRGEQGFIGSQCL--GSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQ 152 S+ +P ++ + L + L+ D L VV++ ++ Sbjct: 76 SYSLSLPLVGEQELSKNGERLSSNRDQGVIISPNEHQVLAISGDCRKLQVVITRAAMSES 135 Query: 153 ANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDN 212 L + LR +S ++ + A+ W + +A + E Q A + L + Sbjct: 136 LEGLLQRP-IDAPLRFESVMDAVDGAPASWWRMARYFIAELERSSELYEQAAFTRDLESS 194 Query: 213 LLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRT 272 L+ + + + + L+ RAR+++ +N E + + DL VSR Sbjct: 195 LIKGLILAQPNNYSEELRDVLGVKLPHYLI-RARQFIHDNAREALHLEDLEAAAGVSRFK 253 Query: 273 LQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQ 332 L +AF + P A+LK+ RL AVR+E++ S T+ + A+ WGF HLG+F+ +Y++ Sbjct: 254 LFDAFRKYFALSPMAYLKKHRLGAVRQEILEQGS-IRTISEIALGWGFTHLGRFSAEYRK 312 Query: 333 LFSEKPSLTLHQRM 346 LF E PS TL ++ Sbjct: 313 LFDESPSQTLQRKR 326 >UniRef50_A3YW71 Transcriptional regulator, AraC family protein n=3 Tax=Chroococcales RepID=A3YW71_9SYNE Length = 337 Score = 169 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 110/279 (39%), Gaps = 11/279 (3%) Query: 80 YTGLALRQSCLVWPNSFWFGIPATRGEQG--------FIGSQCLGSAEIATRPGGTEFEL 131 ++ + S + R G Q L + E L Sbjct: 52 RVDRSVHCAGPKPRGSQIVAMDLDRDLDGDVTSPALMRSHGQPLLPRALFGLSCAGEVHL 111 Query: 132 STPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALA 191 +T + +++ + +A+ L VL + ++ L + A L ++ Q + Sbjct: 112 TTFGPCDMALLLIHREEFLHRADRLGCS--VLEQVLPRNWLTLDPGRFARLRRYLHQLFS 169 Query: 192 TFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLE 251 T +P +++ ++L+ M L S L+ A+ ++ Sbjct: 170 TLETDPTLQQVAGFDELVSNDLIPLMLEALIHGG-HAGDSLPRAPSRIELVKAAQRWMEA 228 Query: 252 NMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTV 311 + +P+ + LC ++H SRR+L F LG+GP +L+ RL+ +R+EL+ MT+ Sbjct: 229 HPRQPIHLEGLCREVHTSRRSLIQGFREHLGMGPMTYLRLHRLHGIRQELLGADPSQMTI 288 Query: 312 KDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 A WGF + G FA Y LF E+PS T+ + G Sbjct: 289 GSRAAAWGFLNPGHFARQYANLFGEQPSETVGRLRSLPG 327 >UniRef50_Q0SE50 Transcriptional regulator, AraC family protein n=8 Tax=Nocardiaceae RepID=Q0SE50_RHOSR Length = 315 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 63/296 (21%), Positives = 114/296 (38%), Gaps = 22/296 (7%) Query: 57 LHP-GKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCL 115 L P G + L + + R G + C +P+++ IP + + C Sbjct: 32 LSPNGAMKLSMRTVDLGPVTLGRLGWGADVSIECD-YPDAYEINIPLSGSLES-----CS 85 Query: 116 GSAEIATRPGG------TEFELST--PDDYTILGVVLSEDVITRQANFLHNPDRVLHMLR 167 + +RPG E L T D ++LGV + ++A+ + D + L Sbjct: 86 QGDTVLSRPGQATVFRADEPTLITRWSGDCSVLGVKFDSAYLEQEADRILGSD-LRPGLH 144 Query: 168 NQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPM 227 S +++ E + + V+ A E + L P V L + A + Sbjct: 145 LPSQIDLTEAPGHSWFRLVRSLTAQLREPADLLANPVVGPQLAGAITSAFILAV-----T 199 Query: 228 VTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNA 287 E R++ R + + ++ + T D+ S R LQ F +G P+ Sbjct: 200 PDEEVRGGAPRPRIVKRVLDGLNDDPARAWTAADMAELAGTSVRRLQEGFREYVGRSPSE 259 Query: 288 WLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 L IRL+ +L +TV + A +WGF H G+F+ Y++ + + PS + Sbjct: 260 CLLDIRLSRADADL-RALEPGVTVSEVAARWGFTHAGRFSAAYRRRYGKSPSELIR 314 >UniRef50_UPI0001C38021 transcriptional regulator, AraC family protein n=1 Tax=Arthrospira platensis str. Paraca RepID=UPI0001C38021 Length = 352 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 71/309 (22%), Positives = 121/309 (39%), Gaps = 7/309 (2%) Query: 40 VYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPN--SFW 97 V + + AW L G F E E+ I++ +T ++ F Sbjct: 43 VDSQSEVLPAW-IEGFHLGEGVFRLEHREVAFPGIEIAHFFTENLFSDHHVIPEGETHFS 101 Query: 98 FGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLH 157 G+ ++G IA E+ S P + + + +++++ + L Sbjct: 102 LGLYPHHPLLSWMGYTDPIGNAIAVHRSQIEYTSSLPPGWHGVYICFNDELLA-NLDLLP 160 Query: 158 NPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATF-CENPENLHQPAVRKVLGDNLLMA 216 NQ+ L V A F+QQ C L P +L + L Sbjct: 161 EKFWENSQDPNQAVLTVHPIRFANFTRFMQQWFPRAECLYRRGLLTPQEAALLREKFLCQ 220 Query: 217 MGAMLEEAQPMVTAESISHQSYRRLL-SRAREYVLENMSEPVTVLDLCNQLHVSRRTLQN 275 +L+ I S R + + + N+ + +T +LC QL +S R+LQ Sbjct: 221 FRELLDYTFEQRGDRQIFKPSRRYWIFETVQAIIDNNLRQNLTNEELCQQLGISLRSLQY 280 Query: 276 AFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFS 335 AF I G+G +++ +LNAVR EL + T+ A +GF H+G+F+ + + F Sbjct: 281 AFKEITGVGVQQYIRARKLNAVREELCGRSANPTTIYAIATAYGFSHMGRFSEQFHRYFG 340 Query: 336 EKPSLTLHQ 344 E PS TL + Sbjct: 341 EYPS-TLKK 348 >UniRef50_D1U469 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U469_9DELT Length = 320 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 67/315 (21%), Positives = 122/315 (38%), Gaps = 12/315 (3%) Query: 32 VHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLV 91 V + A + + + QL G E + + + + + Sbjct: 6 VSHSCFDSLCRAADAVPGLRVDFAQLEGGPCGIEVFSVRHAPFRFTQWRVEKSAHHLGVA 65 Query: 92 WPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITR 151 + A + G I PGG+ + + + G+ + E Sbjct: 66 PLGRVGLALHAEPNLTLNSHGELFGDDVIFLTPGGSTIDSVSFAQTNLFGLSVEEGAFAA 125 Query: 152 QANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGD 211 P + +Q + + + AL T A +G Sbjct: 126 MLGATGCP----LAVPSQGQVRLLTPSREALVRLRDTLWRTREAALTGRCSQAEWDSVGA 181 Query: 212 NLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRR 271 +L + + + + + + RR++ ++ Y+ +N++ PV + D+C ++ VS R Sbjct: 182 SLAACLTTLGDAGRMPRES------ARRRIVRQSLGYINDNLASPVKLGDICRKVGVSER 235 Query: 272 TLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQ 331 TL AF LG+ P A++ RLN VRRE+ + ++ DAA +WGFWH+GQF+ DY+ Sbjct: 236 TLIYAFKQHLGLTPKAYVNICRLNMVRREM--ECGRVASITDAATRWGFWHMGQFSADYK 293 Query: 332 QLFSEKPSLTLHQRM 346 + F E PS TL + Sbjct: 294 RFFGELPSQTLSRSR 308 >UniRef50_B2T964 Transcriptional regulator, AraC family n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2T964_BURPP Length = 324 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 65/309 (21%), Positives = 119/309 (38%), Gaps = 16/309 (5%) Query: 51 QQIYDQLHPGKFHGEF----------TEILLDDIQVFREYTGLALRQSCLVWPNSFWFGI 100 Q +D ++ G F + LD+I++ + + PNS G Sbjct: 18 SQAFDIVYGGSFEHRLLSSKRANMTHQRLTLDEIRLETGCYDFPVIAQGSMPPNSMCIGF 77 Query: 101 PATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPD 160 A + + +G +I P G E + + E+ + A L Sbjct: 78 MADGSDVTRYNTVAIGQEDIQIYPAGVELLYHAVGASRWVNFTVPEERLQETA--LARTG 135 Query: 161 RVLHMLRNQS-ALEVKEQHKAALWGFVQQALATFCE-NPENLHQPAVRKVLGDNLLMAMG 218 R+L + + ++ ++ +AAL A+ P P + +L+ Sbjct: 136 RLLELPGFAATSVRLRPGGRAALTCLADDAMGIAKSLEPTGGMAPEFATEVSRSLVAGYV 195 Query: 219 AMLEEAQPMVTAESIS-HQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAF 277 L A P +ES S + + L+ V+ + + ++ + S R+L+ F Sbjct: 196 DELANATPGGQSESSSGERRHHHLILACERLVVSGEEADIALAEIARRSGYSLRSLELIF 255 Query: 278 HAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEK 337 +G+ P W +RLN R+L+ + TV D A +WGF H+ +F+ Y++ F E Sbjct: 256 RRSVGMTPGRWFMNVRLNGALRDLLGAGP-TCTVADVASRWGFRHMSRFSEQYRKAFGEL 314 Query: 338 PSLTLHQRM 346 PS TL + Sbjct: 315 PSRTLSRSR 323 >UniRef50_A1K6U8 Putative AraC-family transcriptional regulator n=1 Tax=Azoarcus sp. BH72 RepID=A1K6U8_AZOSB Length = 335 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 96/251 (38%), Gaps = 5/251 (1%) Query: 100 IPATRGEQGFIGSQCL--GSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLH 157 +P G G Q + E + D L + + + + R+ H Sbjct: 86 MPLAGGADIRCGEQAVLSSPRLATILSPDDETRMRWQHDARQLLLWIPREALERRLEE-H 144 Query: 158 NPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCE-NPENLHQPAVRKVLGDNLLMA 216 +R L L E + + A + + L L D LL Sbjct: 145 LGERPDRPLSFHLGLPQDEGLTRSWCRMLADLAANIDQCGADWLRFRPTVAALEDCLLRG 204 Query: 217 MGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNA 276 + L + + R + RA +YV ++ E ++V D+ VS R L+ Sbjct: 205 LL-QLHQHNYSDCLNAPRDTGKPRHVQRAMDYVQAHIEEGISVGDIARAACVSVRALEEG 263 Query: 277 FHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSE 336 F P A+L+ +RL R+ L++ +S +V D A ++GF HLG+F+ Y+ F E Sbjct: 264 FRKYCDTTPLAYLRELRLERARKALLALPGRSESVTDVAHRYGFVHLGRFSAYYKARFGE 323 Query: 337 KPSLTLHQRMR 347 PS T+ + R Sbjct: 324 TPSQTVGRARR 334 >UniRef50_B3Q2C8 Putative transcriptional regulator protein, AraC family n=9 Tax=Rhizobium RepID=B3Q2C8_RHIE6 Length = 344 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 59/288 (20%), Positives = 113/288 (39%), Gaps = 7/288 (2%) Query: 56 QLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCL 115 Q + + I LD V + A + +PA+ Q + Sbjct: 43 QHDSRSLNSRCSRISLDGFGVADAHHEGAFSVMIDSPVDVVTVFLPASGNAVFHWSGQQV 102 Query: 116 GSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVK 175 S +A P + L + + + + + + + + L+ Q L++ Sbjct: 103 ESPHVANAPLNARQDGIRSQ----LSLTIDTQSLRDKLSRMLDRT-ISGNLQIQPTLDLA 157 Query: 176 EQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISH 235 + A P+ L D + + + S Sbjct: 158 SSAGTLMRELALSAHRGLSAGGALRQCPSAYSSLLDAIEYLLIESCMH-RYTDELRRPSP 216 Query: 236 QSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLN 295 R + RA E++ E+M++P+++ D+ VS RTLQ+ F P L+ +R+ Sbjct: 217 SPTPRHVKRAMEFMEEHMAQPISLNDIAAAAKVSVRTLQHGFRQFRNTSPTMHLRDLRMC 276 Query: 296 AVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 A R+EL+ ++ ++V + A++WGF HLG+FA +Y++ + E PS T+H Sbjct: 277 AARQELLQNGAK-ISVSEIALKWGFTHLGRFAAEYKRRYGELPSKTVH 323 >UniRef50_B9JJ58 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JJ58_AGRRK Length = 326 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 106/263 (40%), Gaps = 17/263 (6%) Query: 90 LVWPNSFWFGIPATRGEQG-----FIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVL 144 F IP + GS+ G I + + P + ++ + Sbjct: 73 ETDSGKFLMFIPLSGEASFNTSKETFGSRP-GRGFITNGIPYGDMHIMGPRQH-LIVIHD 130 Query: 145 SEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPA 204 ++I R + L P V L +++ L + + ++ P Sbjct: 131 RNEMINRLSGLLETP--VGGNLNFHPDIDLAAGPGRILQDLAEATFSGLAQDTALRQSPL 188 Query: 205 VRKVLGDNLLMAMGAMLEEAQPMVTAESISH---QSYRRLLSRAREYVLENMSEPVTVLD 261 NL A+ ++ E P +E+++ R + RA +++ N+ P+++ D Sbjct: 189 A----LSNLTGAITNLILETVPHRFSEALARIAPAPAPRHVRRAIDFMQANLMRPLSIAD 244 Query: 262 LCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFW 321 + +VS R+LQ F P A+L+ +RL A REL +TV A++WGF Sbjct: 245 MAAVCNVSVRSLQKGFRDFKMTTPMAYLQHLRLEAAHRELQEATP-GLTVAAIALKWGFT 303 Query: 322 HLGQFATDYQQLFSEKPSLTLHQ 344 H G+FA DY+ F + PS TL + Sbjct: 304 HFGRFAVDYRLRFGQLPSQTLRR 326 >UniRef50_Q5YXL4 Putative transcriptional regulator n=1 Tax=Nocardia farcinica RepID=Q5YXL4_NOCFA Length = 312 Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 71/287 (24%), Positives = 113/287 (39%), Gaps = 16/287 (5%) Query: 59 PGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCL--G 116 P + + L + V R G + C +P ++ IP T G + + Sbjct: 35 PDRLGLTMRSLDLGPVTVGRLTWGTEVAIDCE-YPGAYEINIPVTGRLVSTAGDEQIWSE 93 Query: 117 SAEIATRPGGTEFELSTP-DDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVK 175 + + T D ++GV + D + R+A +H V LR L+ Sbjct: 94 PGQATVFHADRRALIETWSADCRVVGVKFAADFLEREAERIHAST-VRGRLRLPHQLDFA 152 Query: 176 EQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMA--MGAMLEEAQPMVTAESI 233 + + V+ A E E L P V L +L A + AM EE P+ Sbjct: 153 TPERRSWLRLVRTLSAQLNEPAELLANPLVADGLASSLATAFLLAAMPEENDPV------ 206 Query: 234 SHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIR 293 + R + R + + E+ + P T+ ++ S R +Q AF LG P A L+ IR Sbjct: 207 -GRMRPRTVKRVLDALHEDPARPWTLAEMAELAGSSVRRVQEAFAEHLGTTPTAALRDIR 265 Query: 294 LNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSL 340 L EL + S+ TV D A +WGF +FA Y++ + PS Sbjct: 266 LARAHAELRTGASR--TVADVAARWGFSSPSRFAAAYRRRYGVPPSA 310 >UniRef50_A1UDL6 Transcriptional regulator, AraC family n=6 Tax=Mycobacterium RepID=A1UDL6_MYCSK Length = 369 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 54/285 (18%), Positives = 100/285 (35%), Gaps = 3/285 (1%) Query: 61 KFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIG--SQCLGSA 118 + + + + + V G + + + +P T + G + Sbjct: 84 RLNARLSAARIGAVTVGYLRYGADVELVNSTALDDYHINVPLTSHADSWCGPATAQATPT 143 Query: 119 EIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQH 178 + A G + D L V S + + L V L ++++ Sbjct: 144 QAAVFLPGRPAGIKWAADCGQLCVKFSRTDLEYELEGLLGRPAVRP-LNIAHSMDLTADS 202 Query: 179 KAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSY 238 A + + P + L+ Q M A Sbjct: 203 SRAWRALLSVLYREVSRPESIVQHPMTGRHFEQLLIHGFLLAQPHYQAMALAADQHAAPP 262 Query: 239 RRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVR 298 ++L A + + E+ T DL ++ +S R LQ +F +G+ P +L+ +RL Sbjct: 263 PKVLRTALDLIEEHPERSWTTTDLAREVGISVRALQESFKRHVGLPPLTYLREVRLIRAH 322 Query: 299 RELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 EL + ++TV AM+WGF HLG+F+ +Y++ F P TL Sbjct: 323 AELAASSESAVTVARVAMKWGFGHLGRFSAEYRRKFGVTPQHTLR 367 >UniRef50_Q47GE0 Transcriptional regulator, AraC family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47GE0_DECAR Length = 330 Score = 163 bits (414), Expect = 5e-39, Method: Composition-based stats. Identities = 58/212 (27%), Positives = 90/212 (42%), Gaps = 3/212 (1%) Query: 134 PDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATF 193 D L V + + + RQA L + L A++V+ A+ + Sbjct: 120 SADCKKLVVRVDKVALERQAVNLTGGA-LRGSLEFDLAMDVESGPGASWGRLAASFVDEI 178 Query: 194 CENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENM 253 P L P V L+ ++ E S R + EY+ N Sbjct: 179 RRTPSILKSPIVAAQFEQLLMTSLLEWQPNNHLTAFREQQVVGS-PRYVRLVEEYMEANC 237 Query: 254 SEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKD 313 P+T+ +L + VS R+L F GI P L+ IR++ VR EL +P ++S +V + Sbjct: 238 HLPITLENLVSISGVSGRSLFAGFRKFRGISPMNHLRNIRMSRVRSELETPSTES-SVTE 296 Query: 314 AAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 A +WGF+ LG+FA Y+ F E PS TL + Sbjct: 297 VATRWGFYELGRFAAAYKSRFGEYPSETLKRY 328 >UniRef50_Q1LI32 Transcriptional regulator, AraC family n=3 Tax=Cupriavidus RepID=Q1LI32_RALME Length = 337 Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 93/256 (36%), Gaps = 8/256 (3%) Query: 94 NSFWFGIPATRGEQGFIGSQCLGSAE--IATRPGGTEFELSTPDDYTILGVVLSEDVITR 151 + +P G Q + S + + D L V + + R Sbjct: 87 DFLLIQMPMAGQADIHCGGQHVVSDSECASVLTPSEPLRMRWSADNDQLIVRIERSALER 146 Query: 152 QANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGD 211 R LR Q + + VQ T P+ P L Sbjct: 147 VCAAYLG-RRPNQPLRFQLGMAWR---NTGWQSLVQYLADTLNHAPQTASHPLTACQLEQ 202 Query: 212 NLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRR 271 + + + V E R + EY+ + VT L VS R Sbjct: 203 LAIGTLLTFQPHSLSDVLREH-GKPLAPRHVKVVEEYIHAHADAAVTPALLAEMAGVSLR 261 Query: 272 TLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQ 331 +L F G+ P +L+ +RL VR++L++ S S +V AA++WGF HLG+F+ +Y+ Sbjct: 262 SLYAGFREHRGLSPMTYLRTVRLERVRQDLLNDASLS-SVTAAALRWGFAHLGRFSVEYR 320 Query: 332 QLFSEKPSLTLHQRMR 347 + F E P TL +R R Sbjct: 321 RAFGECPGETLRRRGR 336 >UniRef50_Q39MU6 Transcriptional regulator, AraC family n=10 Tax=Burkholderia RepID=Q39MU6_BURS3 Length = 355 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 84/213 (39%), Gaps = 3/213 (1%) Query: 135 DDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFC 194 D + + + +V+ R A H D + + + L + Sbjct: 142 DACPQVILRIEREVMERHAQR-HFGDDRRAPVEFEPEFSLSSSQGTCLAQMLPILAGAIA 200 Query: 195 ENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMS 254 + L P + L LL + + + R +Y+ ++ Sbjct: 201 TDAHPLRHPLAFEPLESTLLNLLLHG-HPNSARNGTRHLPVALAPFYVRRVEDYIRAHLD 259 Query: 255 EPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELI-SPWSQSMTVKD 313 EP+T+ L VS TL F GI P +++++RL VR EL+ +V D Sbjct: 260 EPLTIERLAELAGVSPSTLFAGFRHRHGITPMGFVRQLRLQHVREELLADASPGHASVTD 319 Query: 314 AAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 A++WGF HLG+FA +Y++ F E PS TL R Sbjct: 320 IALKWGFAHLGRFAIEYKRAFGESPSATLRMRR 352 >UniRef50_Q2G526 Transcriptional regulator, AraC family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G526_NOVAD Length = 319 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 64/315 (20%), Positives = 113/315 (35%), Gaps = 7/315 (2%) Query: 28 EVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLD-DIQVFREYTGLALR 86 ++ + DV A ++ Q Y Q+ PG F G + V E + Sbjct: 7 KLPTFLRTVHEDVDAQARSLFTLDQNYMQVDPGPFCGTMATCDFGTGLVVSFEQVNKRVL 66 Query: 87 QSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSE 146 Q V + + GE G E LS + + + ++ Sbjct: 67 QVAAVPFGTAQVALILEAGEPTTHNQVGRIRNAGVVMAPGAEARLSAGANTRVCLISIAG 126 Query: 147 DVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENL-HQPAV 205 + A ++ + + AL G V +A F + A Sbjct: 127 E-----AADHLRSRYNFDPDSLRADIFLDPAETTALRGLVTEAYQRFSSPQADRSFDQAS 181 Query: 206 RKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQ 265 + +L + ++ L+ A + N+ PVTV L Sbjct: 182 AAAFHEAVLSVTAWTCASSARTQNQHRVAGDCRTTALTAAIRLIDHNLHNPVTVEWLART 241 Query: 266 LHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQ 325 L VSRR+L+ AF P ++K +RLN++R+ L P + +++ D A + G WH G+ Sbjct: 242 LGVSRRSLEQAFGEAFDTSPGRYIKVLRLNSLRQMLRDPSNAEVSIGDLAARCGLWHQGR 301 Query: 326 FATDYQQLFSEKPSL 340 A+++++LF PS Sbjct: 302 LASEFRELFGVLPSE 316 >UniRef50_A6QA54 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QA54_SULNB Length = 313 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 113/298 (37%), Gaps = 10/298 (3%) Query: 47 ITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGE 106 + W +Q+ G+F + + IQ+ NS G Sbjct: 26 LQQWNLEAEQMQKGRFSATISSVHTPRIQLNDTIYSHGFMTRGEFPGNSIMIGY-VKTNA 84 Query: 107 QGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHML 166 + ++ L E+ G E + + + + + + + + + FL + Sbjct: 85 KVVFQNRVLEINELVISTKGDEVDYISSAENEVFTITVEKKLFMQ--AFLDYFGEPFEIH 142 Query: 167 RNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQP 226 +++ +K + + N L + +L + + L Q Sbjct: 143 QDKRRFFIKPHRLQFFLESINSWMTFLKANHHLLLSENKYDMAESEILRDIFSCLLIDQV 202 Query: 227 MVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPN 286 + + AR+ + N+ E + L +L +S+R LQ F GI P Sbjct: 203 LKERSGFKAE-------EARDLLHANVHERFDSVTLAKELGISQRQLQRVFKETYGISPK 255 Query: 287 AWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 +L +R+NAVR+EL+ ++ T+ A+++ F+ L F+ Y+ LF+E PS TLH+ Sbjct: 256 RYLLNLRINAVRKELLMADPRTATISSIALKYDFFDLNHFSKIYKTLFNELPSKTLHK 313 >UniRef50_Q0S024 Transcriptional regulator, AraC family protein n=2 Tax=Rhodococcus jostii RHA1 RepID=Q0S024_RHOSR Length = 341 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 110/294 (37%), Gaps = 9/294 (3%) Query: 57 LHPG-KFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQ-- 113 + G FH + ++ + + C + IP + G + Sbjct: 52 VGAGSGFHADLKAVVAGSMVSGQLRYNNNTDLYCPAIDG-YHVNIPMSGRLLSESGGEET 110 Query: 114 CLGSAEIATRPGGTEFELSTPD--DYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSA 171 + G++ + TP + + L + L + V ++ Sbjct: 111 AVEQGNAVVYSTGSDARVLTPRTSQLHVFAMKLDRSTMQTAIQDLLDRP-VSRPVQLHGG 169 Query: 172 LEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAE 231 L++ + A V + E + P + L ++ + + L E Q Sbjct: 170 LDLTTVNGRAWRRLVLDTYRSQIE-GTFMANPLLAAPLTYSIAVGLLN-LTEHQYAEELT 227 Query: 232 SISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKR 291 + ++ ++ A EY+ + + P++ + ++ V R LQ F L P +++ Sbjct: 228 RPAMRTAPAPINEAVEYITAHAATPLSPELIAREVGVGVRALQRGFREYLDTTPIEFIRN 287 Query: 292 IRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 R+ +L++ +++ TV A +WGF+H G+F+ +Y++++ PS TL Sbjct: 288 ARMKRAHEDLMAADAETDTVSGIASRWGFYHYGRFSQEYRRIYGVSPSHTLRSA 341 >UniRef50_C6B4J9 Transcriptional regulator, AraC family n=8 Tax=Rhizobium RepID=C6B4J9_RHILS Length = 340 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 95/259 (36%), Gaps = 9/259 (3%) Query: 90 LVWPNSFWFGIPATRG---EQGFIGSQCLGSAEIATRPG-GTEFELSTPDDYTILGVVLS 145 + +P E + + G L P + G+ + Sbjct: 87 EAPSDRMIVFLPMAGNASFEGMREQIYSVPARGTILEAGRAAGARLFGPRRH--FGLFVD 144 Query: 146 EDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAV 205 + IT + + + +++ L V N P Sbjct: 145 QAKITSHLTHMFERT-ISGDVDFHPHIDLTTGPGFVLQQLVSSLHRGLSRNGPLQRSPLA 203 Query: 206 RKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQ 265 L D + + + + R + A +++ E+++EP+++ D+ Sbjct: 204 AGSLCDAAIYLLLETCP-NRYSNELALPAPAPAPRHVKWAIDFMQEHVAEPISLNDIAMA 262 Query: 266 LHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQ 325 VS RTLQ F P ++L +R+ A R+L+ + + + D A++WGF HLG+ Sbjct: 263 AKVSVRTLQQGFRQFRDTTPMSYLHDLRMAAAHRDLLESDRKQV-IADVALRWGFSHLGR 321 Query: 326 FATDYQQLFSEKPSLTLHQ 344 FA +Y++ F + PS TL + Sbjct: 322 FAAEYRKRFGQLPSQTLKR 340 >UniRef50_P43462 Probable thc operon regulatory protein n=3 Tax=Rhodococcus RepID=THCR_RHOER Length = 332 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 55/287 (19%), Positives = 97/287 (33%), Gaps = 8/287 (2%) Query: 62 FHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCL--GSAE 119 F T + + R + +S+ IP G Sbjct: 44 FQMRMTAASFGPVTLGRLDYSTEVEIFTNELRDSYHVNIPMRGELVTGSGRARTVATPHR 103 Query: 120 IATRPGGTEFELS---TPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKE 176 A L +P +L + + + Q + ++ + L++ Sbjct: 104 AAVYRCDQRTLLRGWASPYPTPVLALKIDRRALEDQLAARLGSE-IVDPIVFGMDLDLDT 162 Query: 177 QHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQ 236 V+ P V + + L+ + E E Sbjct: 163 VVGRQWLSLVEGLSHQLDSPEALALHPIVSTPMAECLMSGLLVAAEHDYRARLYEP--KP 220 Query: 237 SYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNA 296 + ++ A +Y+ + +P+TV + + VS R+LQ F LG P LK IR+ Sbjct: 221 ALPGIVRLAVDYLEAHAQQPLTVAQVARNVGVSVRSLQVGFQNSLGTTPMRQLKIIRMQK 280 Query: 297 VRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 R++L+ S V + A +WGF H+G+FA +Y+Q F PS L Sbjct: 281 ARKDLLRADPASEGVTEIAQRWGFLHVGRFAGEYKQTFGVSPSEDLR 327 >UniRef50_Q6W1W0 Putative AraC family transcriptional regulatory protein n=1 Tax=Rhizobium sp. NGR234 RepID=Q6W1W0_RHISN Length = 325 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 62/318 (19%), Positives = 114/318 (35%), Gaps = 8/318 (2%) Query: 30 DNVHQRQTTDVYEHALTITAW--QQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQ 87 + + +D A T+T+W + L + + + + + + Sbjct: 10 PDWVTFEGSDPDRLAATLTSWTSNVVVRPLSRERISYKCAWANAGIVSIGSTHFDGQILF 69 Query: 88 SCLVWPNSFWFGIPATRGEQGFIGSQ--CLGSAEIATRPGGTEFELSTPDDYTILGVVLS 145 +P G +G Q C A G + + V + Sbjct: 70 ESEGAGGQLVLIVPRRGGVDLRMGRQAFCTSPGRGAVIEGNQRIAARSLSSREHMFVAID 129 Query: 146 EDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAV 205 + + R+ + L +++ A+ A P Sbjct: 130 QAALYRRLCDVVEMP-ASGALEFSPEIDLLSGPGTAIASIAATLRAGLDGEAPLRRSPLA 188 Query: 206 RKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQ 265 L + L+ + L + S R + +A E+++ N+S+P+T++++ Sbjct: 189 LTNLSEALIQVILDTLPHRFSEKMRRAASP--VPRHVKKAVEFMMANLSKPITLVEVAAV 246 Query: 266 LHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQ 325 VS RTLQ F P ++L+ +RL A+R EL ++ D A +WGF H+G+ Sbjct: 247 CGVSSRTLQQGFRQFKMTTPMSYLQDLRLKALREELTQARP-GQSIADIAFKWGFTHMGR 305 Query: 326 FATDYQQLFSEKPSLTLH 343 ATDY+ F E PS TL Sbjct: 306 LATDYRNRFGELPSQTLR 323 >UniRef50_Q0K6C4 Transcriptional regulator, AraC-family n=3 Tax=Cupriavidus RepID=Q0K6C4_RALEH Length = 361 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 94/294 (31%), Gaps = 8/294 (2%) Query: 61 KFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFI----GSQCLG 116 + + + A+ PN F I + G+ + Sbjct: 72 ALDARIDTSTIGRLTLVTIAYNQAV--QIEPQPNKDEFVIQTVLAGTCRVETPRGAMLMP 129 Query: 117 SAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKE 176 LS VV+ +I + + + + + + + Sbjct: 130 PGATFVFSPTVPATLSLDPGCERFSVVIRRQLIDEAFRQQFSFEPPVPIEFDMQPV-ADD 188 Query: 177 QHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQ 236 A V A E PAV + +L + A + Sbjct: 189 GRAARWQALVSYLRAETRVRREGSGVPAVDGSIERIVLSTLLLDRFAADGNMLPRRFEA- 247 Query: 237 SYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNA 296 + A Y+ N+ +P+T+ + VS RTLQ F P +L+ +RL+ Sbjct: 248 VLPDYVRNAIAYLRANLEQPLTLEQIAAHCGVSARTLQLGFRKSKNTTPMEYLRLLRLHG 307 Query: 297 VRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 R +L Q V A++ GF HL F+ +Y++ F E PS TL ++ G Sbjct: 308 ARADLQRARQQKGMVSAIALRHGFTHLSLFSREYRREFGELPSQTLRAAAQQGG 361 >UniRef50_Q4KIN6 Transcriptional regulator, AraC family n=15 Tax=Proteobacteria RepID=Q4KIN6_PSEF5 Length = 337 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 71/277 (25%), Positives = 117/277 (42%), Gaps = 13/277 (4%) Query: 81 TGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSA--EIATRPGGTEFELSTPDDYT 138 T + + +S+ +P ++ + L S + L+ D Sbjct: 66 TDVVVDIQDTERFSSYSLSLPLCGEQELSKDGRLLRSDRGQGVIIAPNESQVLAISGDCR 125 Query: 139 ILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPE 198 L VV+S ++ L VL LR + ++ AA W Q + + E Sbjct: 126 KLQVVISRPAMSEALEGLLQRP-VLEPLRFEPGMDALHGAAAAWWRMAQHFIGELAQGNE 184 Query: 199 NLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQ---SYRRLLSRAREYVLENMSE 255 Q A + + +L+ + AQP + + L RAR+++ E+ E Sbjct: 185 LYEQLAFTREIESSLIKGLIL----AQPNNYSSELRAMLGVKLPHYLVRARQHLHEHARE 240 Query: 256 PVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAA 315 V + DL VSR L AF + P A+LKR RLN VR+E++ S + + + A Sbjct: 241 TVHLEDLEAAAGVSRFKLFEAFRKYFALSPMAYLKRHRLNGVRQEILEHGS-ARNISEIA 299 Query: 316 MQWGFWHLGQFATDYQQLFSEKPSLTLHQ--RMREWG 350 + WGF HLG+F+ +Y++LF E PS+T + R G Sbjct: 300 LGWGFTHLGRFSAEYRKLFDETPSVTAQRHPARRPAG 336 >UniRef50_C6B4N8 Transcriptional regulator, AraC family n=13 Tax=Rhizobium RepID=C6B4N8_RHILS Length = 333 Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 102/261 (39%), Gaps = 15/261 (5%) Query: 96 FWFGIPATRGEQGFIGSQCL---GSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQ 152 +P + G GS + G ++ + ++ ++++ Sbjct: 80 LSIVVPRSGGMGVTYGSSRIAEAGQGKLLLYNNFEPNSVIMHGQSNVI-----DELLINW 134 Query: 153 ANFLHNPDRVLHM-----LRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRK 207 L + M L L++ + + + ++ ++ L P Sbjct: 135 PVILQTIGQTFEMPFSGSLDLLPELDLSKPAGRLIGNLTETIISGMRDDGPLLQSPIAMA 194 Query: 208 VLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLH 267 + L + ++ E+ R + RA E++ N+ +P+T+ + Sbjct: 195 HMTQALADLVVRLVPHRLSH-FLENRPALIAPRHVRRAIEFMHANIDQPITMPKVAEAAG 253 Query: 268 VSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFA 327 VS R L+ F A G P +L +RL A R++L+ P S+ T+K ++WGF+H G+F+ Sbjct: 254 VSSRALETGFRAFRGTSPAVYLLTLRLRAARQDLLDPESKE-TMKAICLKWGFFHFGRFS 312 Query: 328 TDYQQLFSEKPSLTLHQRMRE 348 Y+ + E PS T + +R Sbjct: 313 AVYKTTYGEYPSDTRKRVIRR 333 >UniRef50_B9JJ57 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JJ57_AGRRK Length = 331 Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats. Identities = 48/212 (22%), Positives = 97/212 (45%), Gaps = 9/212 (4%) Query: 135 DDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFC 194 D L ++++++ + R + + + + +++ + A Sbjct: 116 GDREHLSLIINQNEVVRLLSAML-EQPISGSIDLAPEFDLRLEAGLAFSRVTTILATGLN 174 Query: 195 ENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQS---YRRLLSRAREYVLE 251 ++ L PA L L+ +L E P + +++ Q R + RA +++ Sbjct: 175 DDASLLQSPAALSCLSTGLI----HLLLENVPHRFSGALARQPALPSPRHIRRAIDFMQA 230 Query: 252 NMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTV 311 N+S+P+++ D+ V R+LQ F G+ P A+L +R+ A R+L+ + + +V Sbjct: 231 NLSQPISIGDIAQASQVGIRSLQEGFKRFKGMSPMAYLANLRMEAAHRDLVMA-NPATSV 289 Query: 312 KDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 A +WGF HLG+F+ DY++ + PS TL Sbjct: 290 AAIAQKWGFTHLGRFSGDYRKSYGCLPSHTLR 321 >UniRef50_C7N068 DNA-binding domain-containing protein, AraC-type n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7N068_SACVD Length = 338 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 112/297 (37%), Gaps = 12/297 (4%) Query: 57 LHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLG 116 L + + + ++ + G R + P+ W+ + T I Sbjct: 45 LAAKRLDARLNAVQIGEVTLGYLTYGTETR--ISLPPSGQWYHVNVTLAGSSRIARTDGE 102 Query: 117 SAEIATRPGGTEFELST------PDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQS 170 E G D G+ + + + L +V + Sbjct: 103 RGETEGMRGAAVLLPHRTQTIEWAHDAAQFGIKIPRTALETHLSDLTRT-QVTGPVDFGL 161 Query: 171 ALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTA 230 +++ + L + + E+ R+ + ++ + ++ + P Sbjct: 162 IIDLTSRAGRGLLRCLDFVRREWDEDGVLAQHGGTRRHVEAMIMTNL--LMAASGPHQNL 219 Query: 231 ESISHQ-SYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWL 289 H S L RA +Y+ E+ E T+ DL VS RTLQ F LG P +L Sbjct: 220 LRQEHTTSRPAALKRALDYIHEHAHELPTLTDLTAAAGVSARTLQLQFLRNLGCTPLQYL 279 Query: 290 KRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 + +RL A R EL+ P S +TV D A WGF++LG+F++ Y+ ++ E PS TL + Sbjct: 280 RDVRLRAARAELLHPRSADVTVTDVATSWGFYNLGRFSSLYRSVYGETPSETLRRAK 336 >UniRef50_B5W7W7 Transcriptional regulator, AraC family n=1 Tax=Arthrospira maxima CS-328 RepID=B5W7W7_SPIMA Length = 342 Score = 160 bits (404), Expect = 8e-38, Method: Composition-based stats. Identities = 67/308 (21%), Positives = 118/308 (38%), Gaps = 7/308 (2%) Query: 41 YEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGI 100 + + W L G F E E+ I++ +T ++ F + Sbjct: 24 DSQSEVLPTW-IEGFHLGEGVFRIEHREVAFPGIEIAHFFTENLFSDRHVIPEGETHFSL 82 Query: 101 PATRGEQ--GFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHN 158 ++G IA E+ P + L + +++++ + L Sbjct: 83 SLYPHHPILSWMGYTDPIGNAIAVHRSQIEYTSGLPPGWHGLYICFNDELLA-NLDLLPE 141 Query: 159 PDRVLHMLRNQSALEVKEQHKAALWGFVQQALATF-CENPENLHQPAVRKVLGDNLLMAM 217 NQ+ L V A F+QQ T C L P +L + L Sbjct: 142 KFWENSQDPNQAVLTVHPIRFANFTRFMQQWFPTAECLYRRGLLTPQEAALLREKFLCQF 201 Query: 218 GAMLEEAQPMVTAESISHQSYRRLL-SRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNA 276 +L+ I + R + + + + N+++ T +LC Q +S R +Q A Sbjct: 202 RELLDHTFEQRGDRQIFKPTRRYWIFATVQAMIDSNLAKNFTNEELCQQCCISPRAMQYA 261 Query: 277 FHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSE 336 F I G+G +++ +LNAVR EL P + T+ A +GF H+G+F+ + + F E Sbjct: 262 FKEITGVGVQQYIRARKLNAVREELCGPSADPSTIYAIASAYGFSHMGRFSEQFYRCFGE 321 Query: 337 KPSLTLHQ 344 PS TL + Sbjct: 322 YPS-TLKK 328 >UniRef50_B6A526 Transcriptional regulator, AraC family n=4 Tax=Rhizobium RepID=B6A526_RHILW Length = 338 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 109/265 (41%), Gaps = 14/265 (5%) Query: 91 VWPNSFWFGI--PATRGEQGFIGSQCLG--SAEIATRPGGT-EFELSTPDDYTILGVVLS 145 V + W I P + +G + +A +F L+ + + L Sbjct: 71 VPETAEWLSILLPRSGAINVSLGKHMVESRPGTLALIHNHEADFFLTKGLPHIADVLRLD 130 Query: 146 EDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAV 205 V+ + A + V L +++ + + + + L P Sbjct: 131 WSVLLQTAAAIFEKP-VNGSLGLSPMVDLTVPAGQLIGNMCRTIIGGIRNHGPLLQSPVA 189 Query: 206 RKVLGDNLLMAMGAMLEEAQPMVTAESISHQSY---RRLLSRAREYVLENMSEPVTVLDL 262 NL A+ +L P + + Q+ + A +++ N+S+P+T+ + Sbjct: 190 MA----NLTQALADLLIRTIPNRYSRHLEKQTSLIAPWHVRDAIDFMQANVSKPITMAVI 245 Query: 263 CNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWH 322 + VS R L+ F + P A+L+ +RL AVR +L+ P ++ +V+ ++WGF+H Sbjct: 246 AEAVGVSVRALEMGFRSFRETTPAAYLRTLRLRAVRNDLLEPSNRE-SVRAVCLKWGFFH 304 Query: 323 LGQFATDYQQLFSEKPSLTLHQRMR 347 G+F+ Y+ ++ E PS T +R R Sbjct: 305 FGRFSAVYRSVYGESPSETRKRRAR 329 >UniRef50_B3Q2F7 Probable transcriptional regulator protein, AraC family n=4 Tax=Rhizobium etli RepID=B3Q2F7_RHIE6 Length = 321 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 53/206 (25%), Positives = 98/206 (47%), Gaps = 8/206 (3%) Query: 140 LGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPEN 199 LG+ ++ D +TR+ N + L +++ + L V L + Sbjct: 120 LGLRIAHDELTRRLGCRLNTP-IRGSLDFSPEIDLSVGFGSLLVQLV-PVLYAGLRDGTL 177 Query: 200 LHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAE--SISHQSYRRLLSRAREYVLENMSEPV 257 L P L + M ++E AQ ++E ++ + + RA +Y+ N++ P+ Sbjct: 178 LQSPIALHHLTET---TMELLIEAAQHRYSSELCRVAESPLPKAVKRAVDYMRANITRPL 234 Query: 258 TVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQ 317 ++ ++ VSRRTLQ+ F P A+L+ +RL V +EL++ ++V A++ Sbjct: 235 SLEEIATACGVSRRTLQSGFRNFRNTTPLAFLQHLRLELVHQELMTGEP-GLSVTQVALK 293 Query: 318 WGFWHLGQFATDYQQLFSEKPSLTLH 343 WGF H G+F+ DY++ + PS TL Sbjct: 294 WGFVHRGRFSADYRKRYGVLPSETLR 319 >UniRef50_Q4C4B2 Helix-turn-helix, AraC type n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C4B2_CROWT Length = 241 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 5/218 (2%) Query: 125 GGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWG 184 TE P + +V+ + A+ L + R+++ + + + Sbjct: 25 NNTEAHEIFPQGGALTQIVIPIETFDTYADQLQR-HDIDDDFRSKNHVNLLPTGMKEIKD 83 Query: 185 FVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYR-RLLS 243 +++Q LA NP L QP + +++ D+ + + + + + ++S S R +L+ Sbjct: 84 YLKQILALAIYNPTWLQQPHIEQLISDDFVPLL---ISQIPIKLNSKSFVKPSRRAKLII 140 Query: 244 RAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELIS 303 +A + +L ++ +P+T+ L L S L F + G+ P ++K RLNAVR+ L Sbjct: 141 QAEKQILNSLEKPLTLKQLAENLGSSSSALSYGFKDLFGMSPMRYIKVRRLNAVRQHLKV 200 Query: 304 PWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 + +T+ A Q+GFW LG F DYQ +F E PS T Sbjct: 201 RDRKRITIARVANQFGFWSLGHFIRDYQAMFGELPSQT 238 >UniRef50_C5AKE9 Transcriptional regulator, AraC family protein n=2 Tax=Burkholderia RepID=C5AKE9_BURGB Length = 344 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 95/260 (36%), Gaps = 8/260 (3%) Query: 93 PNSFWFGIPATRGEQGFIGSQCL--GSAEIATRPGGTEFELSTPDDYTILGVVLSEDVIT 150 + F +P + G Q + + + + + + + Sbjct: 84 EDFFLLQVPLQGQAEIECGGQRFVSSPSTASLVSPSLALRMRWGEACPQAILRIERSAME 143 Query: 151 RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLG 210 R A H + + ++ L + L + Sbjct: 144 RHAQR-HFGEAARGPIEFAPEFDLTSPQGQCLMQLLPVLAEIMSTEAHPLRHALAFEQFE 202 Query: 211 DNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSR 270 LL A+ + A + R EY+ ++ EP+T+ L +VS Sbjct: 203 STLLNALIYGQPNSARNDKARE-RRPLAPTCVRRVEEYIRTHLQEPLTIEQLAEFGNVSA 261 Query: 271 RTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWS----QSMTVKDAAMQWGFWHLGQF 326 TL AF G+ P A+++++RL VRR+LI + +V D A++WGF HLG+F Sbjct: 262 STLFAAFKHYHGVTPMAFVRQLRLERVRRDLIGADAMHGTGRPSVTDIALKWGFAHLGRF 321 Query: 327 ATDYQQLFSEKPSLTLHQRM 346 A +Y++ F E PS +L R Sbjct: 322 AMEYKRAFGESPSASLRMRR 341 >UniRef50_Q0SDR9 Transcriptional regulator, AraC family protein n=7 Tax=Corynebacterineae RepID=Q0SDR9_RHOSR Length = 315 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 95/256 (37%), Gaps = 13/256 (5%) Query: 93 PNSFWFGIPATRGEQGFIGSQCLGSA---EIATRPGGTEFELSTPDDYTILGVVLSEDVI 149 P ++ IP G + S P + I+G + D + Sbjct: 68 PGAYGINIPLAGRIVSVTGGTEVTSTPGLATICPPDTRTVITNWSSSCEIIGFKVDRDYL 127 Query: 150 TRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVL 209 R+ + + L+++ A FV+ + LH V + L Sbjct: 128 QREMDRV----LARPGQELPRQLDLRTGAGADWLRFVRSVADQALRDSVLLHSDQVSQQL 183 Query: 210 GDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVS 269 L A+ M ++ + R++ R + + ++ + P + ++ + VS Sbjct: 184 CGALTTALVLT-----AMPDDDTGAAGIRPRIVKRVIDAIQQDPAHPWSAGEMAELVGVS 238 Query: 270 RRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATD 329 R +Q F +G+ P +L +RL V EL + T+ + A +WG H G+FA Sbjct: 239 VRRMQQGFREYVGMTPMEYLVDVRLERVHAEL-TGSGSCATISEVATRWGIMHTGRFAAA 297 Query: 330 YQQLFSEKPSLTLHQR 345 Y++ + PS +L R Sbjct: 298 YRRKYGVTPSESLRDR 313 >UniRef50_Q0SIM0 Transcriptional regulator, AraC family protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SIM0_RHOSR Length = 301 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 7/207 (3%) Query: 140 LGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPEN 199 L V + + RQ + LR +E++ + ++ Sbjct: 100 LIVRIDRQGLERQVQEALGAP-LREPLRFDLRMELERTGIRSWRDVLELLRGEMENGGSL 158 Query: 200 LHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQ--SYRRLLSRAREYVLENMSEPV 257 ++P V K LL + AQP E++ + R + RA E + + E + Sbjct: 159 SNEPIVMKEFERLLLSQLIV----AQPNNYTEALQRPVPAAPRTIRRAVEILEHHADELL 214 Query: 258 TVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQ 317 TV D+ + +S R LQ+ F G P +L+ +R+ VR L+ + TV DAA + Sbjct: 215 TVEDVASATGISVRALQDGFKKYYGTTPMGYLREVRMKTVRAWLLDADPSTTTVSDAASR 274 Query: 318 WGFWHLGQFATDYQQLFSEKPSLTLHQ 344 GF HL +F+ Y++ F E P TL + Sbjct: 275 CGFVHLERFSVQYREKFGETPPATLRR 301 >UniRef50_A5VD66 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VD66_SPHWW Length = 327 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 98/246 (39%), Gaps = 6/246 (2%) Query: 103 TRGEQGFIGSQ--CLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPD 160 + + + L + E + E + L V + + R A Sbjct: 84 SGSAEIGCNGRRFALAAGEASLLNPDDEVSMRWSGHCHKLIVRIERAALERFAEDWFGF- 142 Query: 161 RVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAM 220 + L ++ + A G V+ + F L ++ + L A+ + Sbjct: 143 YLPGPLNFENRPGWETPELAVARGLVELIVQDFESGVATLSHAKAQRHFEEALFTAL--L 200 Query: 221 LEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAI 280 + + R + RA +Y+ + E + + DL VS RTL +F Sbjct: 201 MSRRHSLSGHMQAGASVVPRAVKRAEDYIAAHAGEDIGIADLVAASEVSNRTLFESFRRF 260 Query: 281 LGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSL 340 G+ P +L+R RL+ VR EL+ P S ++V D AM+W F LG+F++ Y +F EKPS Sbjct: 261 RGVTPMQYLRRYRLDRVREELLDPGSD-VSVTDVAMRWNFDQLGRFSSYYASVFGEKPSQ 319 Query: 341 TLHQRM 346 TL + Sbjct: 320 TLRRGR 325 >UniRef50_A1WJE1 Transcriptional regulator, AraC family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WJE1_VEREI Length = 327 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 108/292 (36%), Gaps = 11/292 (3%) Query: 58 HPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGS 117 GK L + F G A+ + F P + Q +G + + Sbjct: 42 GGGKVDSALYGAQLGTLSFFILRYGAAVHINPGELNGFMLFQAPLSGNAQIRVGRHTVAA 101 Query: 118 AEIA--TRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVK 175 + +L + + V + + L D + + + Sbjct: 102 SPQMGAIISPKLALQLDWSEGCEQVLVKFPRERVEHACRALIGNDLKKGAIEFHPEMPLH 161 Query: 176 EQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISH 235 + Q L + N E QP ++ + + +L QP ++ + Sbjct: 162 AASGRSW----QYHLGSLLCNHEFSDQPHSEPLVHAQVQTLIHHLLLC-QPNNYSDQLLR 216 Query: 236 Q---SYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRI 292 + + +R L A +Y+ ++ EP+T+ + N R+L AF P A++++ Sbjct: 217 RPGTAPQRKLRVAEDYITSHLHEPLTLEAIANACGTGVRSLCAAFREHYQCAPMAYVRQK 276 Query: 293 RLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 RL A R EL++ + V D A++ GF HLG+F+ Y+ + E P TL + Sbjct: 277 RLAAARSELMNAAPGAH-VTDIALRCGFSHLGRFSLSYRARYGETPLQTLRR 327 >UniRef50_A9BUW9 Transcriptional regulator, AraC family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BUW9_DELAS Length = 392 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 60/261 (22%), Positives = 108/261 (41%), Gaps = 7/261 (2%) Query: 93 PNSFWFGIPATRGEQGFIGSQCLG--SAEIATRPGGTEFELSTPDDYTILGVVLSEDVIT 150 + F IP + G+Q + + R + DD L V ++ + Sbjct: 132 RDFFLLQIPLRGSAEIRCGAQQVDATPRLASLRSPTEPLSMRWADDSPHLIVRMARPALV 191 Query: 151 RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLG 210 + L ++ + + + + A L F+ T A+ + Sbjct: 192 ARLEALLQAPAGRPLVFDL-GVPLDQPALAPLVHFIDCLRHTLDAGNALQATQALAQHAE 250 Query: 211 DNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSR 270 + LL ++ + A R + +A+EY+ + +P+++ D+C + S Sbjct: 251 EYLLTSLLMSATHSHSRALAGDSRRSLLPRGVRKAQEYMQAHADQPLSLADVCREAGCSA 310 Query: 271 RTLQNAFHAILGIGPNAWLKRIRLNAVRRELI----SPWSQSMTVKDAAMQWGFWHLGQF 326 RTLQ AF G+GP +L+++RL+ VR EL + V+D A ++GF HLG F Sbjct: 311 RTLQAAFRQHAGMGPMDFLRQLRLDRVRAELQAAKGPGAAAGSGVRDVAQKYGFLHLGHF 370 Query: 327 ATDYQQLFSEKPSLTLHQRMR 347 A Y+ F E PS T +R++ Sbjct: 371 AAQYRSRFGELPSETASRRVQ 391 >UniRef50_B3QCR7 Transcriptional regulator, AraC family n=2 Tax=Rhodopseudomonas palustris RepID=B3QCR7_RHOPT Length = 335 Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 98/252 (38%), Gaps = 4/252 (1%) Query: 95 SFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQAN 154 S F + + + L D+ L + +S+ +T Sbjct: 83 SLVFAYAGSAEARTGRLRSDIAGHRAFVASATRPVTLKYAPDFEQLILNVSQRSVTTNLE 142 Query: 155 FLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLL 214 L + + + ++ LW + + + HQ ++ +L Sbjct: 143 ALIGAP-LSQPIIFKPTSNLRRTSARRLWEQLMSLVERLGRHDGGYHQQITTELEQAIIL 201 Query: 215 MAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQ 274 + A P++ +E+ + + RR + + +Y+ +P+TV L VS RTL Sbjct: 202 SFLTANESNYTPLLMSEAAA--AGRRPVHKVADYLEAYWDQPLTVEMLARVSGVSVRTLF 259 Query: 275 NAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLF 334 ++F G P +++RIRL R+ L +++V A+ GF +LG FA Y++ F Sbjct: 260 HSFRGQFGYSPMEFVRRIRLERARQMLAGADP-ALSVTSVALSCGFGNLGHFAGYYKKAF 318 Query: 335 SEKPSLTLHQRM 346 E PS TL + Sbjct: 319 GEAPSATLSRAR 330 >UniRef50_C3KLQ8 Probable transcriptional regulator protein, AraC family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KLQ8_RHISN Length = 341 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 58/263 (22%), Positives = 108/263 (41%), Gaps = 5/263 (1%) Query: 88 SCLVWPNSFWFGIPATRGEQGFIGS-QCLGSAEIATRPGGTEFE-LSTPDDYTILGVVLS 145 + ++F +P + + +G + L + A FE L+ ++ +G+ Sbjct: 68 TFSQPSDAFVLYLPHSSVMEIDVGRKRLLSTPGTAMVGNMAHFERLTIHENRGHIGIAFD 127 Query: 146 EDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAV 205 + + Q + L + VL + + +E + L F N Sbjct: 128 KSAMVGQLSQLLDAP-VLGDIGLCATVETDSAIGSRLAALGSLLWDCFDGPGGNRVSTTA 186 Query: 206 RKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQ 265 L ++ + L + +S + R L RA EY++ N++EP++V D+ + Sbjct: 187 TTHLFQAAMVMILETLPHNYSARLHKPMSP-AMPRNLKRAIEYMVANIAEPMSVADIARE 245 Query: 266 LHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQ 325 S R LQ AF P +L+++RL VR+ L + ++++ A WGF H+G+ Sbjct: 246 AGTSVRALQTAFQQFKDTTPLNYLRQMRLEGVRKTLCD-DANTLSIAQVARAWGFTHMGR 304 Query: 326 FATDYQQLFSEKPSLTLHQRMRE 348 F+ Y F + PS TL R Sbjct: 305 FSAVYHDAFGQTPSETLKLHSRR 327 >UniRef50_C3KLK8 Probable transcriptional regulator protein, AraC family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KLK8_RHISN Length = 326 Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 104/266 (39%), Gaps = 5/266 (1%) Query: 82 GLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILG 141 L++ Q V + + + S A G EL + L Sbjct: 63 SLSIGQRDEVPKLLILLPLHGSACVKIGKESVISKPGHAAILDGNRLSELQVEKVRSHLS 122 Query: 142 VVLS-EDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENL 200 +V+ D+ + L P V L L++ + ++ Q + + Sbjct: 123 LVIDQRDIFRQLGTVLERP--VYGALDFVPELDLADGTGEIIFKLSQIIAGSLGSDSGIP 180 Query: 201 HQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVL 260 P L +++ + + ++ + + RA +++ N+ P+++ Sbjct: 181 DMPHALSYLSGSIVSLLVDTVPHRFSGALSQG-EWLPSPKHVKRAVDFMHANLRAPISMS 239 Query: 261 DLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGF 320 D+ + R+LQ F G P ++L ++R+ A R+L+ QS++V + A +WGF Sbjct: 240 DIAGAAGIGVRSLQEGFKRFKGTSPISYLAQLRMEAAHRDLLEAD-QSVSVAEIARKWGF 298 Query: 321 WHLGQFATDYQQLFSEKPSLTLHQRM 346 H+G+FAT+Y++ + PS R Sbjct: 299 RHMGRFATEYRKCYGCPPSEARKGRA 324 >UniRef50_B2I0G2 AraC-type DNA-binding domain-containing protein n=13 Tax=Acinetobacter RepID=B2I0G2_ACIBC Length = 328 Score = 157 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 99/250 (39%), Gaps = 4/250 (1%) Query: 95 SFWFGIPATRGEQGFIGSQCLGSAEI--ATRPGGTEFELSTPDDYTILGVVLSEDVITRQ 152 ++ +P + I S E + +L D VV+ E + Sbjct: 75 AYSISLPIQGRQALNIRGAHYQSDENRGLIVSNNDQQDLIIDKDCRKFQVVIPERSMQIV 134 Query: 153 ANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDN 212 L N ++ N EQ A W +Q L + + + + Sbjct: 135 LADLLNKPIETPIIFNPEMHLDSEQLIGAWWKNIQNFLQLKSQYSNFYGLQMLSEDYENF 194 Query: 213 LLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRT 272 ++ A+ + +E +S+SHQ + + R +++E+ E + DL VS+ Sbjct: 195 VIKALL-LSQENNYSEALKSLSHQDEPAYIRKVRNFIIEHAHEEICAEDLQRLAGVSKSK 253 Query: 273 LQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQ-SMTVKDAAMQWGFWHLGQFATDYQ 331 L + F G P ++LK+ RL + + L + + +++ A WGF HL +F+ +Y+ Sbjct: 254 LYDEFQQYYGTSPMSYLKKYRLQQIYKILSTTGADKKVSISKLAYDWGFNHLSRFSQEYR 313 Query: 332 QLFSEKPSLT 341 + F E PS T Sbjct: 314 EEFGENPSET 323 >UniRef50_Q0K9L2 Transcriptional regulator, AraC-family n=2 Tax=Cupriavidus RepID=Q0K9L2_RALEH Length = 318 Score = 157 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 67/303 (22%), Positives = 117/303 (38%), Gaps = 4/303 (1%) Query: 41 YEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGI 100 E ++ Y + + L+ + + G A S P F + Sbjct: 10 DEFEASLYGVNGRYMLRSAQRRDWRLRVLELNGVALMAGQEGAATIYSGAGMPGCFNLFL 69 Query: 101 PATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPD 160 P + E + + I F + + + + + +++ R + Sbjct: 70 PLSGHECTVVDGRRFDRHAIGWMAPDRMFHIDASRPASWMTISMPCELVCRWMATYADNA 129 Query: 161 RVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAM 220 + + RN + AL Q+ L P LH PA + LL Sbjct: 130 DLSLLARN--LVLTGGPSLGALLALTQRLLFIDDRQPAQLHHPAGEQTARSELLRLAFNT 187 Query: 221 LEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAI 280 L T ++ HQ++RR+LS+A + + P+ + DLC S RT++N F+ Sbjct: 188 LLPLAARST-DTARHQNHRRILSQAMDLLAAARHTPILLEDLCAATSASERTIRNVFNRY 246 Query: 281 LGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSL 340 +GI P+ +L RL+ R+ L + TV M++G W +G+FA Y++LF PS Sbjct: 247 VGISPHRYLVLHRLHHARQALKHAKA-GETVTSICMRFGVWDIGRFAMQYRRLFGVLPSQ 305 Query: 341 TLH 343 TL Sbjct: 306 TLR 308 >UniRef50_C3MI82 Putative AraC family transcriptional regulatory protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3MI82_RHISN Length = 333 Score = 157 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 9/225 (4%) Query: 130 ELSTPDDYTILGVVLSEDVIT-RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQ 188 L+ L VV+ ++ R + L P V +++ + Sbjct: 114 SLTLSGPMEHLVVVVDRATLSSRLMDMLEVP--VSGGFDFFPEIDLTAGPGLIIAQTAAA 171 Query: 189 ALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREY 248 + + + P R + L+ + L S R + RA E+ Sbjct: 172 LHSGLAASAALRNAPVARTSFANALVELLLESLPHRHTSELNRRTSPM--PRHVKRAVEF 229 Query: 249 VLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQS 308 + N+S+P+T+ ++ R+LQ+ F P+++L+ +RL+AV +EL+ S S Sbjct: 230 MRANLSKPLTIQEIALASGSGIRSLQDGFRRFKQTTPSSYLQYLRLDAVHQELLQAKS-S 288 Query: 309 MTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ---RMREWG 350 TV D A +WGF H G+FA DY++ F + PS TL R+R G Sbjct: 289 QTVCDIARKWGFSHSGRFAADYRKRFGQAPSQTLQSSSFRIRPPG 333 >UniRef50_Q05335 XylDLEGF operon transcriptional activator 3 n=35 Tax=Bacteria RepID=XYLS3_PSEPU Length = 331 Score = 157 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 98/240 (40%), Gaps = 15/240 (6%) Query: 112 SQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQ--ANFLHNPDRVLHMLRNQ 169 E+ +L+ +D V L V+ R ++ H P + Sbjct: 94 EHYFSPGELLLINPDDRADLTYSEDCEKFIVKLPSVVLDRACSESYWHKPSEGIRFTTRH 153 Query: 170 SALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVT 229 + + L GF+ L C+ E H ++ +V + +LE V+ Sbjct: 154 NLQQ--------LDGFI-NLLGLVCDEAE--HTNSMPRVQEYYTGIIATKLLEMLSSNVS 202 Query: 230 AESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWL 289 E+ S R +++ +N+ + +++ L +S R+L F G P ++ Sbjct: 203 RETFSEGCPS--FERVVQFIEDNLKQSISLERLAELALMSPRSLYTLFEKHAGTTPKNYI 260 Query: 290 KRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREW 349 + +L +R L P + +V + A+ +GF+H G+FA +Y+ F E PS TL +R +W Sbjct: 261 RNRKLECIRARLSDPNANVRSVTEMALDYGFFHTGRFAENYRSTFGELPSDTLRRRKMKW 320 >UniRef50_B9JL66 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JL66_AGRRK Length = 328 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 11/254 (4%) Query: 93 PNSFWFGIPATRGEQGFIGS-QCLGSAEIATRPGGTEFE-LSTPDDYTILGVVLSEDVIT 150 P+++ +P++ + +GS + + A + FE L+ + + +GV + + Sbjct: 72 PDAYALYLPSSGVMEIDVGSKRLISKPTTALLGDMSCFERLTLHEGRSHMGVAFEKSAMI 131 Query: 151 RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLG 210 +Q + L + + + +++ A + L C N E +P+ Sbjct: 132 QQLSELLDAPVI-GGIDFADTIDLATAKGARVAAL--SHLVWRCLNVEETDRPS--SAFV 186 Query: 211 DNLLMAMGAMLEEAQPMVTAESISHQ---SYRRLLSRAREYVLENMSEPVTVLDLCNQLH 267 + LL AM L E P + ++ + + L RA EY+ N+S P+ V D+ + Sbjct: 187 ERLLQAMMIALLETVPNNYSARLTKPISPAIPKRLKRAIEYMHSNISSPMGVADIAREAG 246 Query: 268 VSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFA 327 S R LQ AF P +L+ IRL+ R+ L P + S++V + A WGF H+G+FA Sbjct: 247 TSVRALQAAFQQFKDTTPLNYLRTIRLDGARKTLTDP-AISLSVAEVARNWGFSHMGRFA 305 Query: 328 TDYQQLFSEKPSLT 341 Y Q F E PS T Sbjct: 306 ALYHQSFGEMPSST 319 >UniRef50_A1T7M7 Transcriptional regulator, AraC family n=2 Tax=Mycobacterium RepID=A1T7M7_MYCVP Length = 326 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 52/292 (17%), Positives = 114/292 (39%), Gaps = 8/292 (2%) Query: 58 HPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIG--SQCL 115 F I L ++ + Y L + S + + ++ + + S Sbjct: 38 DADGFAATMHGIRLRNVSML--YLDLHVPASIDIPESGRYYAVHMPMNGVAMVHHPSSTF 95 Query: 116 GSAEI--ATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALE 173 ++ + G + D L + + + +T L + + L + + Sbjct: 96 QASTLRSLVSSPGVPLRIDLGVDTPQLLIRIEQQAMTAHVTRLIGRN-LARPLVFEPEFD 154 Query: 174 VKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESI 233 + + VQ + + + + ++ ++ + + Sbjct: 155 LATEAAMRWNAAVQLVHTEVYHAGSLIQKGRAIGPVEELVMSSLLHLQPSNYHADITQPS 214 Query: 234 SHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIR 293 R ++ +A +++ ++++E +T+ L +H+S R++Q F + LG+ P A+++ R Sbjct: 215 PPDPRRTVIQQAMDFIDDHLAERITMDSLAAAVHMSVRSIQQGFRSELGMSPMAFVRERR 274 Query: 294 LNAVRRELISP-WSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 L V EL S +TV A +WGF HLG FA +Y++ + E PS TL + Sbjct: 275 LERVHEELADAIPSDGVTVTAVAERWGFHHLGSFAVEYRKRWGEAPSETLRR 326 >UniRef50_B0SX63 Transcriptional regulator, AraC family n=1 Tax=Caulobacter sp. K31 RepID=B0SX63_CAUSK Length = 374 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 65/325 (20%), Positives = 112/325 (34%), Gaps = 5/325 (1%) Query: 21 LKLTPKVEVD-NVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFRE 79 P V R+T +E QL P G L D+ Sbjct: 45 FGARPSPASPGEVVLRETEGPHEVWAHAAGRNLAVTQLTPDPCRGHLLRAGLGDMGFDAG 104 Query: 80 YTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTI 139 LR ++ +F F + + +I P G E + Sbjct: 105 AFSGDLRVRGVMARKAFSFVSVLEQDGVLNQWGHRIEEGDILAIPPGDELDGRFQGHTAY 164 Query: 140 LGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPEN 199 V ++ ++A ++A+ A V Q + Sbjct: 165 AVVTAPWGLVMQRAEAFEW--LADPGFWTEAAVYSPPPEARAACRRVLQGCSGVLRAMGA 222 Query: 200 LHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLEN-MSEPVT 258 P+ L +L + L + + + + R++ A +++ + V Sbjct: 223 APPPSAVSFLRHEILDGVLTALSQVK-VEGGRRHGLLNAARIVRGAEDFLDGGGARQAVQ 281 Query: 259 VLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQW 318 + D+C L++SRRTL AFH L + P A+L+ ++A R + + TV A+ Sbjct: 282 IEDICRALNISRRTLYRAFHDQLDVSPKAYLRLKNMSAARARFLGAGVRPTTVTQVALDH 341 Query: 319 GFWHLGQFATDYQQLFSEKPSLTLH 343 GFW LG+F+ Y+ +F E PS TL Sbjct: 342 GFWELGRFSGAYRAMFGESPSETLR 366 >UniRef50_A1K6W1 Putative AraC-family transcriptional regulator n=4 Tax=Proteobacteria RepID=A1K6W1_AZOSB Length = 341 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 94/257 (36%), Gaps = 6/257 (2%) Query: 93 PNSFWFGIPATRGEQGFIGSQCLGSAEIA--TRPGGTEFELSTPDDYTILGVVLSEDVIT 150 + +P + E G + S+ F L L V + DV+ Sbjct: 85 EDFLLVQMPLSGAEILRSGDIVVNSSRRIATVASPQRPFSLRHEAGTEKLFVRIDRDVLE 144 Query: 151 RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLG 210 R H + L + + + ++ +A + + +L Sbjct: 145 RH-CLQHLGHALRQPLEFRLDMPLDTAAGQQWMRALRWLVAELDSVADGEVITSRYPLLA 203 Query: 211 DNLLMAMGAMLEEAQPMVTAESISHQS---YRRLLSRAREYVLENMSEPVTVLDLCNQLH 267 + +ML QP +E + + + R Y+ +N EP+T++DL Sbjct: 204 AQFEQMLISMLLVCQPHNYSEQLQADAPSIAPAFVKRVERYIEDNAHEPLTIVDLAAHAG 263 Query: 268 VSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFA 327 VS R+L F P L+ +RL VR L+ TV AM+WGF HLG F Sbjct: 264 VSSRSLFAGFKRYRDTTPMLHLREVRLRRVREALLEGRPGQTTVTSEAMRWGFSHLGHFT 323 Query: 328 TDYQQLFSEKPSLTLHQ 344 Y++ F E PS TL + Sbjct: 324 AAYKRRFGESPSETLAR 340 >UniRef50_B8ESU5 Transcriptional regulator, AraC family n=1 Tax=Methylocella silvestris BL2 RepID=B8ESU5_METSB Length = 327 Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 108/290 (37%), Gaps = 10/290 (3%) Query: 63 HGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSA--EI 120 G + L ++ + G + ++ + + + + Sbjct: 43 RGYLRHLSLGNVDLSSLGFGSEAVVEGAAPAHYYYIQMVLSGQLGLESQGNSVVVDCKSL 102 Query: 121 ATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKA 180 A + L +D L V + DV+ R+ + + + + Sbjct: 103 AVINPSRKLSLHHSEDCRKLIVRIRSDVVERELANILGSPVRDPV----NFVSTMGADGP 158 Query: 181 ALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISH---QS 237 L ++ + C+ ++ + + + + + + P +E IS + Sbjct: 159 GLRRLIRT-IDYVCQEVDDPFSRCETVHVYERIEGLLCSAILTGVPNDYSEEISRLGEHN 217 Query: 238 YRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAV 297 L RA YV +SE +++ DL N S RTL F+ P ++KRIRL Sbjct: 218 GPSYLRRAERYVKSRLSETISIDDLVNASGASMRTLYKVFNTHHNATPMGYVKRIRLEHA 277 Query: 298 RRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 RREL + TV + AM G HLG FA DY++++ E PS TL + + Sbjct: 278 RRELENIDGSVRTVAEVAMAVGMEHLGNFAADYKKIYHELPSETLRRNRQ 327 >UniRef50_UPI0001AF5566 helix-turn-helix domain-containing protein n=2 Tax=Actinomycetales RepID=UPI0001AF5566 Length = 338 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 53/203 (26%), Positives = 84/203 (41%), Gaps = 3/203 (1%) Query: 142 VVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLH 201 + ++ R A + PDR +R V L + +P Sbjct: 137 IGFDPALLDRVA--PNAPDRAHEPVRLTGHRPVSVAAGNRLTALIDYLRDHILADPSAAS 194 Query: 202 QPAVRKVLGDNLLMA-MGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVL 260 P V +L +A + A A T + LL RA ++ EN + + + Sbjct: 195 APLVIDTAAAHLAVATLNAFPHSALLDPTPTDRRDSAQPVLLRRAMAFIEENAHQDIALA 254 Query: 261 DLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGF 320 D+ ++V+ R LQ F L P +L+R+RL+ REL+ S TVK A +WGF Sbjct: 255 DIAAHVYVTPRALQYMFRQRLDCTPMQYLRRVRLDRAHRELLDSSRASATVKQIANRWGF 314 Query: 321 WHLGQFATDYQQLFSEKPSLTLH 343 H+G+FA Y++ + P TL Sbjct: 315 IHIGRFAIYYRETYGRSPHATLR 337 >UniRef50_A1R1F9 Transcriptional regulator, AraC family n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R1F9_ARTAT Length = 307 Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 100/247 (40%), Gaps = 10/247 (4%) Query: 100 IPATRGEQGFIGSQCLGSAEIA--TRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLH 157 IP +G++ + S P F +S L V + + R A L+ Sbjct: 69 IPLAGHASMQVGARTVESNPRMATVPPIDRPFSMSWDGGSPHLIVYVRRSAVERVAGQLY 128 Query: 158 NPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAM 217 D V +++ A V + P+ V+ +L D+ M Sbjct: 129 GNDAV----DLGYGMDLSGAAGRAFLRAVVELHDDMISRPQFAAPAFVQGLLADS----M 180 Query: 218 GAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAF 277 + L A E+ + ++ RL+ RE + + E +TV D+ L VS RTLQ A Sbjct: 181 VSRLLMAMQPPAGEARNAEAEGRLVRECRELLERHAFEELTVPDIAECLGVSVRTLQTAL 240 Query: 278 HAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEK 337 A G P+ L+ IRL+ R L+ + +V A Q GF H G+F+ Y + F E Sbjct: 241 RAETGATPSELLRSIRLDRAREMLLEANPREQSVTAVAEQCGFTHQGRFSALYVKAFGEL 300 Query: 338 PSLTLHQ 344 PS +L + Sbjct: 301 PSESLRR 307 >UniRef50_Q46VL0 Transcriptional regulator, AraC family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46VL0_RALEJ Length = 368 Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats. Identities = 62/248 (25%), Positives = 99/248 (39%), Gaps = 6/248 (2%) Query: 100 IPATRGEQGFIGSQCLGSA--EIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLH 157 IP G+Q L S + T + D + + + + + + L Sbjct: 110 IPVAGHADIQCGAQSLVSDVRTASLLSPDTPTRMHWHQDCAQVLLWIEKAAMEHRFALLT 169 Query: 158 NPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENP-ENLHQPAVRKVLGDNLLMA 216 D V L +L + V ++ L PA + D LL Sbjct: 170 GRDPV-GSLAFDPSLPQHAGLASPWTQAVLDLARNIDQHGTHWLAFPAAVASMEDYLLRT 228 Query: 217 MGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNA 276 + + + A S + + R + R +YV N P+TV DL VS R L+ Sbjct: 229 LLLLQPHTYTYLLARS-AEPARPRHMQRVIDYVHANAETPLTVADLAQIACVSVRALEEG 287 Query: 277 FHAILGIGPNAWLKRIRLNAVRRELI-SPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFS 335 F L P +L+ +RL+ VR+ LI + ++ ++ D A ++GF HLG+FA Y+Q F Sbjct: 288 FRRHLNTTPVGYLRDVRLDGVRQALIAAAGAEHASITDIAYRFGFTHLGRFAAYYKQRFG 347 Query: 336 EKPSLTLH 343 PS TL Sbjct: 348 VSPSATLR 355 >UniRef50_D1BV80 Transcriptional regulator, AraC family n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BV80_XYLCX Length = 322 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 54/231 (23%), Positives = 94/231 (40%), Gaps = 7/231 (3%) Query: 116 GSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVK 175 A G + L + ++ D++ R+ + V+ +R + +++ Sbjct: 99 TPRSAAVTASGEVLRMRYSAGNPRLMLCIAPDLL-RERLEVAAEVGVVVTIRGGATVDIT 157 Query: 176 EQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISH 235 + G V LA P L ++ + A L E + H Sbjct: 158 AGAGRSWRGLVDVVLADLEHEGGLGRSPLAATTLQLAVVDGLIASLAE----PWTDPGDH 213 Query: 236 QSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLN 295 + R++ RA + E+ +EP+ D+ + +S R LQ F A L P A+++ RL Sbjct: 214 STPERVIRRAARLIEEHCAEPLGTPDIAEAVGISVRALQAGFKAHLSTTPMAYMRHARLR 273 Query: 296 AVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 VR L + +V +AA +WG HLG+F+ DY+ F E PS T + Sbjct: 274 RVRGSLTDGSAH--SVAEAASRWGVTHLGRFSADYRAAFGEFPSETFRRAR 322 >UniRef50_A5V4X1 Transcriptional regulator, AraC family n=2 Tax=Sphingomonas wittichii RW1 RepID=A5V4X1_SPHWW Length = 343 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 89/248 (35%), Gaps = 5/248 (2%) Query: 98 FGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITR-QANFL 156 F + + L ++ + + + + Y V +S+ I A L Sbjct: 96 FSLSGVAQIAQENSTIELSPGQMCVLDPDAQVKQTFGEGYKHFTVKMSKCGIEAVLAQEL 155 Query: 157 HNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMA 216 R LH L+ A L V+ + + L Sbjct: 156 GFRPRELHFSAQPVRLQGPAAAFAHL---VRTICDDLDSGIAGFTHARACGTVEEALQRL 212 Query: 217 MGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNA 276 + A + + S + + R +Y+ E+ +P+++ ++ VS R+L Sbjct: 213 LLAAVPHNYSELFDAPPSSPA-PYYVRRVEDYIREHSRDPISLEEMIAVSGVSARSLHAG 271 Query: 277 FHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSE 336 F P +LK RL+ R+L ++V + A+ GF HL +FA DY F E Sbjct: 272 FRRFRDTTPMVYLKNHRLDLAHRQLKIAADDGLSVTEVALACGFTHLSKFARDYLDRFGE 331 Query: 337 KPSLTLHQ 344 +PS TL + Sbjct: 332 RPSATLKR 339 >UniRef50_A1WJA6 Transcriptional regulator, AraC family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WJA6_VEREI Length = 327 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 67/292 (22%), Positives = 117/292 (40%), Gaps = 16/292 (5%) Query: 59 PGKFHGEFTEILLDDIQV-FREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCL-- 115 PG+ ++ L + + Y L + + +P + Q G++ + Sbjct: 43 PGQLDVAHNQVRLARVSLNVLHYGAQVLIDPGE-RGDFYMVQLPLSGSAQLACGTESVSV 101 Query: 116 GSAEIATRPGGTEFELSTPDDYTILGVVLSEDVI-TRQANFLHNPDRVLHMLRNQSALEV 174 ++ E + D T+L + + V+ R + + + ++ EV Sbjct: 102 DPGVLSVLQPHIESRMVWSGDCTMLLLQVPRSVVHERTMAWGIDGTPRFALAHSRQVPEV 161 Query: 175 KEQHKAALWGFVQQALATFCENPEN-LHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESI 233 AA W V + L PA L + LL A A+L P A + Sbjct: 162 -----AAWWQAVLGLTRNIDRFGDQWLRHPAAYAALEEFLLSAFTALLS---PPDAARCL 213 Query: 234 SHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIR 293 ++ R L RA+EY+ N + D+ + VS RTL+ F + P A+ +R R Sbjct: 214 ANPGDARCLRRAKEYIHANPERALRCADIASHACVSPRTLEAVFKRCGEVSPLAYARRCR 273 Query: 294 LNAVRRELI--SPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 L AV L +++ V + A+ +GF H+G+FA Y++ F+ PS TL Sbjct: 274 LQAVHEALRLARHEGRAVNVTEVALSYGFLHMGRFAAQYREQFACSPSETLR 325 >UniRef50_C6B5E0 Transcriptional regulator, AraC family n=7 Tax=Rhizobium RepID=C6B5E0_RHILS Length = 343 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 62/272 (22%), Positives = 101/272 (37%), Gaps = 13/272 (4%) Query: 81 TGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCL--GSAEIATRP---GGTEFELSTPD 135 T L ++ P F IP + + IG + G + G L P Sbjct: 78 TSRTLDET----PQHLAFYIPHSGSFRLSIGKTVVESGPGRLLMANNHEAGDRLILGGPH 133 Query: 136 DYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCE 195 + L V+ R L +L L + +++ + VQ + Sbjct: 134 CSD--ALFLDWKVVRRMLVSLVEMP-ILDSLDLEPVVDLATPSGQLIGSLVQTIVQGMRN 190 Query: 196 NPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSE 255 L P + + L + + + RA +Y+ N++E Sbjct: 191 GGPLLSSPLALAAMSETLANLVIRFGRHRLSDHLEKQKVCLIAPWHVRRAIDYMHANIAE 250 Query: 256 PVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAA 315 P+T+ + + + VS R LQ F A G P +L+ IRL A R +L P +Q +V++ Sbjct: 251 PLTMTMVADGVGVSLRALQTGFRAFRGTSPGGYLRTIRLQAARDQLRDPMNQ-RSVREIC 309 Query: 316 MQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 WGF H G+F+ Y+ F E P T Q R Sbjct: 310 ATWGFSHAGRFSIVYRSAFGESPRDTRLQAER 341 >UniRef50_A5VE15 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VE15_SPHWW Length = 336 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 70/308 (22%), Positives = 117/308 (37%), Gaps = 26/308 (8%) Query: 48 TAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQ 107 ++ + +L G+ +D +VF + Q C P + IP T + Sbjct: 48 PGFRLDHKRLDVGRIK--IDFARIDCGKVFE------VIQVCD--PGYYSCRIPITGSCE 97 Query: 108 GFIGSQ--CLGSAEIATRPGGTEFE-----LSTPDDYTILGVVLSEDVITRQANFLHNPD 160 + + LG +I G F+ P IL + + + A L +P Sbjct: 98 YRLHNAKWTLGPGQIL---AGNPFDSIPKRFVAPYTQAILSIEV-GALNEVLAAELGHP- 152 Query: 161 RVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAM 220 ++ LR + + L V+ TF + V + L LL+ + Sbjct: 153 -IVDPLRFEPIPSAGPAAR-LLSTMVEFNWMTF-DTGTAATHWRVARQLERALLVGLLRA 209 Query: 221 LEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAI 280 V E S + + RA Y+ NM+ + + D+ + VS RTL F Sbjct: 210 APHNYS-VEMELQSREIAPHYVRRAEAYIRANMARDLKMEDIVEESGVSSRTLFYGFRRW 268 Query: 281 LGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSL 340 P A+LK RL+ R L +V D A+ G+ +L +F++DY+ F E+PS Sbjct: 269 RQTTPMAYLKAARLDCARMALTGASVAGGSVTDVALGVGYQYLSRFSSDYRARFGERPSD 328 Query: 341 TLHQRMRE 348 TL R+ Sbjct: 329 TLLSVTRQ 336 >UniRef50_B0JHC6 Transcriptional regulator n=3 Tax=Microcystis aeruginosa RepID=B0JHC6_MICAN Length = 334 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 72/316 (22%), Positives = 123/316 (38%), Gaps = 54/316 (17%) Query: 56 QLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCL-VWPNSFW-FGIPATRGEQGFIGSQ 113 QL F G + I++D++ + E + + V + W F IP F Sbjct: 43 QLSGDHFEGYLSRIIIDEVML--ELSQRNCLTNVAGVIHSKMWVFAIPVQVNSVFFQNLY 100 Query: 114 CLGSA-----------EIATRPGGTEFELSTPDDY--------------TILGVVLSEDV 148 L + + P F+L D+Y L S V Sbjct: 101 PLENNYLGIIPPKSEISVFQHPFSNRFQLYVHDNYLQQLCQTLELPEAKKFLNSSASSIV 160 Query: 149 ITRQANFLH---NPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAV 205 I H + ++ ML N ++ Q KA FV+Q L Sbjct: 161 ICPSEKIRHLQQSCHQLYQMLFNLDRQQISGQRKALRLNFVKQKL--------------- 205 Query: 206 RKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQ 265 ++ + + L+ + + P T S +L +A E + +N+ +T+ +C Sbjct: 206 KEEIVKDFLLTLAVTKDIKTPKNTIRRTS------ILKKAEEMMRKNLRSDLTIPAICQD 259 Query: 266 LHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQ 325 L VS+RTL+ F + P + K +RLNA+ + L + +Q+ + + A + GF+H G Sbjct: 260 LKVSQRTLEYIFKDFYQMSPYNYFKLLRLNALHQSL-NQNNQTKLIYEIAEELGFFHRGY 318 Query: 326 FATDYQQLFSEKPSLT 341 A+DY++LF PS T Sbjct: 319 LASDYKKLFGYFPSKT 334 >UniRef50_B3Q6V1 Transcriptional regulator, AraC family n=2 Tax=Rhodopseudomonas palustris RepID=B3Q6V1_RHOPT Length = 332 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 100/265 (37%), Gaps = 10/265 (3%) Query: 90 LVWPNSFWFGIPATRGEQGFIGSQCLGSA---EIATRPG-GTEFELSTPDDYTILGVVLS 145 L + + + +G++ + + PG G +++ ++ L + + Sbjct: 72 LPPDDFVGLQLALSGSAITMVGNRRVATNARQSCICPPGQGRDYQFD--AEFEQLFLGVR 129 Query: 146 EDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAV 205 + R L + L + + H L T +L + Sbjct: 130 LSALERTLAGLLG-GKPNAPLEFEPVADNDYPHSENLRQLTLFFGGTLNATKVSLPSQYL 188 Query: 206 RKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQ 265 ++ + + A + + R + EY+ N +E +T+ L Sbjct: 189 AELEQATAVAFLHACKHNFSSYLGV--AEKDAASRHVKLVEEYIEANWNESLTIEKLVEL 246 Query: 266 LHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQ 325 +S RT+ AF G P A+ KR+R+ VR+ L+ + +V A+Q GF HLG Sbjct: 247 TGMSARTVFKAFQRTRGYSPMAFAKRVRMERVRQLLLEAGGDA-SVGAIAVQCGFPHLGH 305 Query: 326 FATDYQQLFSEKPSLTLHQRMREWG 350 FA DY++ F E PS TL + R G Sbjct: 306 FAKDYRKTFGENPSDTLARGRRFRG 330 >UniRef50_B9JM27 Transcriptional regulator protein, AraC family n=4 Tax=Rhizobium/Agrobacterium group RepID=B9JM27_AGRRK Length = 344 Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats. Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 2/189 (1%) Query: 162 VLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAML 221 + L +++ + G Q + + H P L + L + + Sbjct: 146 LSGALDLSPVVDLSTSSGQVIGGLGQVIILGIRDAGPLCHSPIAISNLTETLADMIVRSI 205 Query: 222 EEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAIL 281 + I H R + A E++ N+ P T+ + VS R+L+ F Sbjct: 206 PHRLSHHLDKKI-HMIAPRHVHSAIEFMRANIDRPFTMQKVAEVAGVSIRSLEEGFRTFK 264 Query: 282 GIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 G P A+L+ +RL AVR +L+ ++ +V+D ++WGF+H G+F+T Y+ + E PS T Sbjct: 265 GTTPAAFLRTMRLRAVREDLLDHSNR-RSVQDICLKWGFFHFGRFSTVYRMTYGENPSDT 323 Query: 342 LHQRMREWG 350 + R + Sbjct: 324 RKRISRGFA 332 >UniRef50_C5CKJ3 Transcriptional regulator, AraC family n=2 Tax=Variovorax paradoxus S110 RepID=C5CKJ3_VARPS Length = 354 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 65/307 (21%), Positives = 112/307 (36%), Gaps = 21/307 (6%) Query: 56 QLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPA--TRGEQGFIGSQ 113 Q G +Q+ G + + + +P + + G Sbjct: 54 QWGAGDADAVMWSAATPRLQLMVLRYGSEVEIRPRPFEDFGLVQMPLRGSMQVESAGGRH 113 Query: 114 CLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALE 173 +G ++A L + + V + ++ A+ + +P R Q Sbjct: 114 DVGPGQVAVLSSRDPLTLRWSESCEQIIVRMPHSLLRSGASSIRSPGRAPD---GQPVFV 170 Query: 174 VKEQHKAALWGFVQQALATF------CENPENLHQPAVRKVLGDNLLMAMGAMLEE---- 223 ++ + +Q L T L PA L D + + + + Sbjct: 171 LESEAAGQWGALLQSLLNTLPASDAVDGAASPLCDPAWIHHLEDGMALFTTLHMRQRARE 230 Query: 224 ---AQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAI 280 +P A S S R L A +V + P+ + DL VS RT Sbjct: 231 GVSTEPGPAAPGASGGSSAR-LQAAERWVRTRLCAPLALEDLARAAGVSSRTFYMDCMRQ 289 Query: 281 LGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSL 340 LG+GP AWL+ +RL++ RR+L++ + V D A GF HLG+F+ YQ+ F E P Sbjct: 290 LGVGPMAWLRDLRLDSARRQLLA--NPGRNVTDVATDCGFGHLGRFSAYYQRRFGELPRD 347 Query: 341 TLHQRMR 347 T+ + +R Sbjct: 348 TVARALR 354 >UniRef50_B8Y4V1 EthR n=4 Tax=Corynebacterineae RepID=B8Y4V1_9NOCA Length = 331 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 94/285 (32%), Gaps = 4/285 (1%) Query: 61 KFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQ--CLGSA 118 +F G T + I + + N + +P + + Sbjct: 48 QFRGILTVQNVGPITIGELDYNSEVSLDFPHITNGYHVNVPVEHSMSSRSRGREVHITPK 107 Query: 119 EIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQH 178 A + L + V + + + L + + S + ++ Sbjct: 108 HGAMYRKEADALLKASRRLHMTAVKFDSAALEQTLSALLGEPVEVDLEL-ASGINLERGL 166 Query: 179 KAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSY 238 W + V L +L+ + Q S + Sbjct: 167 GKEWWDLLSDVRRQIDGGNTLFSCRMVADPLAQSLMTGFL-LASTHQFSEQLHSGDSVAT 225 Query: 239 RRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVR 298 L + ++ +SE T ++ ++ +S R +Q F +G P+ +++ RL Sbjct: 226 PESLKLVEDAIMARLSESFTFTEIAQEVGISLRAIQRGFAHHIGTTPSQFVRTERLRRAH 285 Query: 299 RELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 +L++ + V D A +WGF HLG+F+ Y++L+ PS TL Sbjct: 286 VDLVAGDPSTTRVADVAARWGFTHLGRFSAQYRKLYGVSPSDTLR 330 >UniRef50_Q3JJW1 AndR n=53 Tax=Burkholderia RepID=Q3JJW1_BURP1 Length = 405 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 89/248 (35%), Gaps = 17/248 (6%) Query: 102 ATRGEQGFIGSQCLGSAE---IATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHN 158 T Q + + PG F+ D + + + A Sbjct: 170 LTGSAQVRTMGRAFDVDAHTGVLCAPG-EPFDAHLSRDCEQFVLRIDAATLAAHAG---- 224 Query: 159 PDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMG 218 + + + +A Q L +PE L + + L + Sbjct: 225 ----DAAAALDPVIGIDDSALSAW----MQQLQLVARSPELLASASANPRVATRLEQLLL 276 Query: 219 AMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFH 278 +L + P + + RA+E++ +++P+ + D+ V RTL++ F Sbjct: 277 DLLIDGHPPAAPPARRADPAPGFVRRAQEFIGAQLAQPLQLADIAQAAGVPERTLRDGFL 336 Query: 279 AILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKP 338 G P +L++ RL R EL+ + + + A+ GF H G+FA Y++ F E P Sbjct: 337 QFRGTSPMQYLRQRRLERAR-ELLRTAAPERRIAEIALDCGFAHFGRFAIAYRERFGELP 395 Query: 339 SLTLHQRM 346 S TL R Sbjct: 396 SATLADRR 403 >UniRef50_A0QJX7 Transcriptional regulator, AraC family protein n=2 Tax=Mycobacterium avium RepID=A0QJX7_MYCA1 Length = 358 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 49/206 (23%), Positives = 94/206 (45%), Gaps = 7/206 (3%) Query: 141 GVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENL 200 V ++ +V+ + A H + + + A + A+ T P+ Sbjct: 156 VVTIAAEVLQKVAAEWHTA--LSQQTQFLNWRPRSRAAVRAWHRALDYAMLTLAS-PDTA 212 Query: 201 HQPAVRKVLGDNLLMAMGAMLEEAQPMVTA-ESISHQSYRRLLSRAREYVLENMSEPVTV 259 QP + + L GA+LE +T + +S + L A ++ + +E + + Sbjct: 213 RQPLIAAGMAGLL---AGALLECYPSNLTEQDPVSDLALPETLKEAVSFIHRHAAEDIGI 269 Query: 260 LDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWG 319 D+ +H++ R +Q F L P +++R+RL+ +EL++ + S TV + A +WG Sbjct: 270 NDVAAAVHLTPRAVQYLFRRQLDTTPTEYMRRVRLSRAHQELVAATTASSTVTEIAQRWG 329 Query: 320 FWHLGQFATDYQQLFSEKPSLTLHQR 345 F H G+FA Y+Q + + P TL Q+ Sbjct: 330 FAHTGRFAVLYRQTYGQSPHTTLRQQ 355 >UniRef50_B6B515 Transcriptional regulator, AraC family n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B515_9RHOB Length = 332 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 51/250 (20%), Positives = 97/250 (38%), Gaps = 12/250 (4%) Query: 100 IPATRGEQGFIGSQCLGSA--EIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLH 157 +P + G+ +GS + +++ D +L + + D + A Sbjct: 75 MPLSGAAVVANGTGAVGSGIGQATVLNPTRATQMTWQADCRMLLLQIDRDALHGIAERAS 134 Query: 158 NPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENL----HQPAVRKVLGDNL 213 ++ + L G+ +Q +A ++V+ + L Sbjct: 135 GLPLSEPVVFD----TAAPIGTGPLHGWARQFIACVRATDAQAGFGHWGALQQQVIEEQL 190 Query: 214 LMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTL 273 ++ + + + + S + + RA++Y+ N +EP+TV + + S RTL Sbjct: 191 ILGLLTHQQSNIHHLLTQRAPLGSSLQ-IRRAQDYIHANAAEPLTVSAIAAEAGCSIRTL 249 Query: 274 QNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQL 333 Q F G+ P +L+ +RL+ R L+S V A GF HLG+F+ Y+ Sbjct: 250 QAGFRQHFGLTPVEYLRDLRLDLARYLLLS-RPAGTPVSSIAYDSGFSHLGRFSQLYRAR 308 Query: 334 FSEKPSLTLH 343 F E PS T Sbjct: 309 FGELPSTTRA 318 >UniRef50_Q39N46 Transcriptional regulator, AraC family n=2 Tax=Burkholderia cepacia complex RepID=Q39N46_BURS3 Length = 327 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 52/236 (22%), Positives = 88/236 (37%), Gaps = 14/236 (5%) Query: 116 GSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVK 175 G + T F + D V + I H L+ + L++ Sbjct: 105 GPTQGVIVGPATRFGGTFSRDCEQFFVRIDRRAILAHTGHDH--------LQIEPTLDLT 156 Query: 176 EQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMV-TAESIS 234 Q ++ +PE + + + + ++L QP Sbjct: 157 RQELQPWLAQLR----VMASSPETVALAQRDRRIALEFERLVISLLLAGQPHHCQTRPGG 212 Query: 235 HQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRL 294 R + RA Y++E+ EP+T+ D+ V RTL + F P ++ RL Sbjct: 213 TALVPRTVKRAEAYIVEHACEPITLADIALAAGVPVRTLLDGFQRFSHGSPMQLVRERRL 272 Query: 295 NAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 R +L+ ++ V D A+ GF +LG+FA Y++ F E PS TL + R G Sbjct: 273 ERARDQLLHAR-EAERVADVALGCGFANLGRFAILYRETFGESPSDTLRRARRSAG 327 >UniRef50_UPI00019090B3 AraC family transcriptional regulator n=1 Tax=Rhizobium etli CIAT 894 RepID=UPI00019090B3 Length = 181 Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 3/179 (1%) Query: 172 LEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAE 231 + Q AA + ++ + +L P V L LL+A + Sbjct: 4 IAPDSQASAAQFRLLEFVIGELDREDASL-PPLVLAELEQALLVAFLCSNHHNYSHL-LN 61 Query: 232 SISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKR 291 S + R EY+ +N +P+T+ L + S R+L AF G+ P ++K+ Sbjct: 62 KQPLASAPWQVRRVEEYIRQNWDQPLTIEALALVANASVRSLFYAFKKGRGVSPMTFVKQ 121 Query: 292 IRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 +R+ + L SP S + +V A GF +LG FA Y F E PS TL + R+ G Sbjct: 122 VRMRNAKAMLASPSS-ATSVTSVAYACGFSNLGHFARYYYSTFGEHPSDTLRKAFRDSG 179 >UniRef50_A1T1B9 Transcriptional regulator, AraC family n=2 Tax=Mycobacterium RepID=A1T1B9_MYCVP Length = 331 Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 4/147 (2%) Query: 201 HQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISH----QSYRRLLSRAREYVLENMSEP 256 PA +++ + A++ A P A + + LL RA Y+ N Sbjct: 184 DGPAPTRLVASTTASMIAAVVLSAFPTNAASEPTALDRIDAKPPLLRRATAYIEGNADAD 243 Query: 257 VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAM 316 + + D+ +HV+ R LQ F L + P +L+R+R++ RELI + TV+ A Sbjct: 244 IALADIAGSVHVTPRALQYMFRKYLDMTPMEYLRRVRMDHAHRELIKADAGQTTVQIVAA 303 Query: 317 QWGFWHLGQFATDYQQLFSEKPSLTLH 343 +WGF H G+FA Y++ + PS TL Sbjct: 304 RWGFAHTGRFAAMYREAYGRNPSDTLR 330 >UniRef50_C6WK40 Transcriptional regulator, AraC family n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WK40_ACTMD Length = 434 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 62/326 (19%), Positives = 106/326 (32%), Gaps = 17/326 (5%) Query: 25 PKVEVDNVHQRQTTDVYEHALTITAWQQIYDQL---HPGKFHG-EFTEILLDDIQVFREY 80 P+ H D E A + +Y +L G G L +++ F E Sbjct: 119 PEERSPVEHVVDVPD-DEAAEELL--SAVYTRLTLRSSGPQRGLRLASAALGEVR-FDEV 174 Query: 81 TGLALRQSCLVWPNSFWFGI--PATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYT 138 + ++ + + FG+ + G + G + + + Sbjct: 175 ELRSTVEAEVDPLDCHLFGLVRSGRVDTRSADGPRAHGPGDAFLVARPEDPHRARVAHGG 234 Query: 139 ILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPE 198 VL ++ + A +R V + A PE Sbjct: 235 FAMTVLPTSLVQQVAPG-------PEPVRFTGYAPVGPEAARGWTATRDHLRAELLTTPE 287 Query: 199 NLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVT 258 L P V L + A + ++ L RA ++ N + Sbjct: 288 LLTNPLVVGHASRLLAATLLAAFPNSTTADPVVEDRRDAHPDALRRALAFIDANPDRDLA 347 Query: 259 VLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQW 318 D+ VS R +Q AF LG P A+L+++RL+ R +L S + TV A +W Sbjct: 348 TSDVAAAARVSTRAVQLAFRRHLGTTPMAYLRQVRLDHARADLTSATTGQDTVTRIAAKW 407 Query: 319 GFWHLGQFATDYQQLFSEKPSLTLHQ 344 G+ FA Y+ + PS TL + Sbjct: 408 GYGRASVFAARYRAAYGVSPSQTLRE 433 >UniRef50_Q89CX9 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89CX9_BRAJA Length = 337 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 89/236 (37%), Gaps = 8/236 (3%) Query: 114 CLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALE 173 + + P G + + L + + + L R + Sbjct: 106 PVNEQQPGITPPGQPTTIVFEPGFEQLILRIKTGALENALTTLLGAKP-----RGSLVFD 160 Query: 174 VKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTA--E 231 K +++ + ++ + +L + + + L + T E Sbjct: 161 PTAPPKPPTAQLLRELIMFLANQLNSMAAQLPKSMLQELEQALIVSFLSAHRHNFTELLE 220 Query: 232 SISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKR 291 S + + ++ A EYV N + +T+ +L +Q + S R+L AF G P + K Sbjct: 221 SSATEPAPLVVRLAEEYVEANWARAITIEELASQTNTSIRSLYAAFKKYRGYSPMRFAKT 280 Query: 292 IRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 +RL R+ L+ + +V A + GF +LG FA D++Q+F E PS + R Sbjct: 281 VRLRRARQMLLE-GNPKTSVSQIAFKCGFGNLGHFAGDFRQMFGELPSEVFARAQR 335 >UniRef50_B5ZVG3 Transcriptional regulator, AraC family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B5ZVG3_RHILW Length = 322 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 4/205 (1%) Query: 141 GVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENL 200 G + +D++ R V + ++ L ++ C + + Sbjct: 121 GFSVPKDLVHRAVADSLEC-FVPSGFEFCPSFDLATGPAVQLMNLMRFFRTEICG--QLV 177 Query: 201 HQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVL 260 P + M ++ + + + L RA E+ N + P+T+ Sbjct: 178 VSPIALAGFQEMFCSLMAQNMQHSLSQKLVSARVNSITPGQLRRAMEFARANAALPITIA 237 Query: 261 DLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGF 320 D+ + VS RTLQ F + L P ++L+++R RR+LI + + TV A QWGF Sbjct: 238 DMASVAGVSVRTLQANFRSFLNTTPTSFLRQLRFEGARRDLIHA-APTATVTHIARQWGF 296 Query: 321 WHLGQFATDYQQLFSEKPSLTLHQR 345 H+G+F+ +Y+ F PS L +R Sbjct: 297 VHMGRFSAEYRSHFGVSPSADLGRR 321 >UniRef50_UPI00016A2E59 transcriptional regulator, AraC family protein n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A2E59 Length = 337 Score = 147 bits (370), Expect = 7e-34, Method: Composition-based stats. Identities = 60/234 (25%), Positives = 92/234 (39%), Gaps = 9/234 (3%) Query: 112 SQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSA 171 Q G+ D LGV + I + + + Sbjct: 113 EQVGGTGSTVLVASNARSAFRYSADNVQLGVRIDAGRIADIWRSIAGREPPAALPLPAPF 172 Query: 172 LEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAE 231 + A V+Q L + P L + + L+ +G L +A P Sbjct: 173 DAPRRDRWLASVQLVRQLLDP--DTPAALRAMQLPRAEEILLMSLVGEQLTDALPAEGG- 229 Query: 232 SISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKR 291 + RA ++ E+ P+T+ D+ H S RTL AF +G LK Sbjct: 230 -----IASACVRRAVAFIEEHAERPLTLTDIAAASHCSVRTLHRAFQQWRDVGVMRHLKD 284 Query: 292 IRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 +RL VR L P ++ ++ + A +WGF HLGQFATDY++ F+E+PS T QR Sbjct: 285 VRLRRVRMALQDPD-ETASITEIATRWGFAHLGQFATDYRKAFNERPSDTRAQR 337 >UniRef50_C6WIT0 Transcriptional regulator, AraC family n=2 Tax=Actinomycetales RepID=C6WIT0_ACTMD Length = 331 Score = 147 bits (370), Expect = 8e-34, Method: Composition-based stats. Identities = 48/202 (23%), Positives = 87/202 (43%), Gaps = 6/202 (2%) Query: 150 TRQANFLHNPDRVLHMLRNQSAL------EVKEQHKAALWGFVQQALATFCENPENLHQP 203 R + + +P + ++ + + V A L + P P Sbjct: 130 ARYSITMLDPALLNQVVGGEEQVRLLDHRPVDAVTAATLRRVIDHVRDDVLAAPGATASP 189 Query: 204 AVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLC 263 + L A+ A P+ + + S ++ R + RA ++ N ++ ++ Sbjct: 190 LLVGAATRYLAAAVLAAFPTTAPVGPSAADSRDAHPRTVRRAVAFIEANAGRDLSAAEIA 249 Query: 264 NQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHL 323 HV+ R +Q AF LG P A+L+R+RL+ R +L++ S TV + A++WG+ Sbjct: 250 AAAHVTPRAIQLAFRRHLGTTPTAYLRRVRLDGARAQLLAAEPGSTTVTEVALRWGYSRP 309 Query: 324 GQFATDYQQLFSEKPSLTLHQR 345 G F+T Y++ E PS TL R Sbjct: 310 GVFSTHYREAHGEPPSRTLRGR 331 >UniRef50_B9Z058 Transcriptional regulator, AraC family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z058_9NEIS Length = 245 Score = 146 bits (369), Expect = 9e-34, Method: Composition-based stats. Identities = 54/238 (22%), Positives = 105/238 (44%), Gaps = 8/238 (3%) Query: 110 IGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQ 169 + + + + FE +P+ + + V ++ + + LH + Sbjct: 1 MCGEQSTRDTLHVFSCYSGFEFLSPERHVVANVEFDLPSLSSELTRQLG--QTLHTKLSS 58 Query: 170 SALEVKEQHKAALWGFVQQALA--TFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPM 227 + + + ++QAL E + +L NLL + + + + Sbjct: 59 PVVLLSPDTAENIRLLLRQALGSIQVSEAATPEQYKERQSLLERNLLYGLMEAVSDFPEL 118 Query: 228 VTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNA 287 S L+ R ++++ S +++ +LC +L++SRRT+Q AF +G P Sbjct: 119 AADRSPKSSKNWELVKRVQQFLQNPDSCVLSIAELCIELNLSRRTIQYAFENAIGTNPAK 178 Query: 288 WLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 +L+ +RLN VR +L+ + ++V +AA++WGF HL FA DY+ F E PS T + Sbjct: 179 YLRAVRLNHVRHDLM----RGLSVTEAAIRWGFLHLSAFAHDYRVFFGELPSTTSKRY 232 >UniRef50_A5V4Y1 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V4Y1_SPHWW Length = 316 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 49/227 (21%), Positives = 90/227 (39%), Gaps = 13/227 (5%) Query: 121 ATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKA 180 + G + +D V +S V+ A + + LR + + A Sbjct: 98 SVVDTGELRRMRWSEDCVQRVVQISNAVLDHHATMMMGRP-LSRKLRFAAEMP-TGAEGA 155 Query: 181 ALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQS--- 237 W + + + + D+L + L E+ P ++ + Q Sbjct: 156 GWWHYASLLCLEVSAEAQG-------QAVIDSLETLLILKLLESHPSNYSDQLRPQRCKI 208 Query: 238 YRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAV 297 + + + +Y++ + P+T+ L VS R L + F G P +LK +RL Sbjct: 209 APQHVRKVEQYIIAHADRPITLEQLVEVSGVSARALFDGFRRFRGTSPMVFLKSVRLERA 268 Query: 298 RRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 R +L + +V + A +WGF+ G+FA Y++LF E PS TL + Sbjct: 269 RDDLRNALP-GESVTEIACRWGFYQFGRFAAHYRRLFGELPSETLRK 314 >UniRef50_A5V484 Transcriptional regulator, AraC family n=2 Tax=Sphingomonadaceae RepID=A5V484_SPHWW Length = 330 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 44/235 (18%), Positives = 88/235 (37%), Gaps = 9/235 (3%) Query: 115 LGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEV 174 + + G + L V ++ + N L E Sbjct: 100 IRPDNLHISSPGAPIRIHMTPACRHLTVRIARSAFEDYLTRIMNIP-ANRPLVFYPGREC 158 Query: 175 KEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESIS 234 + + + P + ++ M M +L ++ I+ Sbjct: 159 GRELPVVWRNLLNHLIDQTSHGPMLMSNNRTQRQYS----MLMIELLLSNYCNSYSDQIA 214 Query: 235 ---HQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKR 291 + + RAR+ + + + ++V DL NQ+ VS R+LQN F LG+ P +++R Sbjct: 215 LYGNDISPWHVRRARDIIHASFDDSISVTDLANQVGVSVRSLQNGFRQFLGLTPVEYVRR 274 Query: 292 IRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 RL + L+ ++ +V + ++ G + G++A Y+Q + +PS TL R Sbjct: 275 HRLEKLHSALMDASPEA-SVTELMLECGIVNFGRYAQYYRQQYGCRPSETLRSRR 328 >UniRef50_A4EX82 Transcriptional regulator, AraC family protein n=2 Tax=Roseobacter RepID=A4EX82_9RHOB Length = 358 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 48/204 (23%), Positives = 79/204 (38%), Gaps = 15/204 (7%) Query: 149 ITRQANFLHNPDRVLHMLRNQSALEVKEQ-HKAALWGFVQQALATFCENPEN-------- 199 I R+A L + + L L +V + E Sbjct: 156 INREALHLQAEELLQRKLSEAVLFAPAVDMRNPGLLHWVNDLFSVVGLAEEGEAFSGRAA 215 Query: 200 LHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTV 259 L QP + + L L + + +++ HQ L RA+E++ N++EP+T+ Sbjct: 216 LRQPRMEESLILGFLTQQPSSISHELREERPDALPHQ-----LRRAQEFINSNLTEPLTL 270 Query: 260 LDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWG 319 ++ S R+LQ F G+ P +L RLN L+ + + V A G Sbjct: 271 AEISKAAGCSLRSLQVGFRKHFGVTPMGYLNCQRLNHAHY-LLQSRTGARRVSTVAFDAG 329 Query: 320 FWHLGQFATDYQQLFSEKPSLTLH 343 F HLG+F+ Y++ F P TL Sbjct: 330 FSHLGRFSIAYRKAFGCSPKETLQ 353 >UniRef50_A7ICV7 Helix-turn-helix-domain containing protein AraC type n=2 Tax=Rhizobiales RepID=A7ICV7_XANP2 Length = 326 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 103/269 (38%), Gaps = 8/269 (2%) Query: 81 TGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTIL 140 + S + + G+ + S + G E + Sbjct: 58 IDNQVSLSGPLSEDMITLGLGIDLPPGTRHWLNDVTSGNVGVFMPGDEHDALYAPGSLYA 117 Query: 141 GVVLSEDVITRQANFLHNPDRVLHMLRNQ-SALEVKEQHKAALWGFVQQALATFCENPEN 199 + LS DV+ +A + + + A + Q A + + Sbjct: 118 VLSLSGDVLEEEAAQRELVLTPKELGGSGIHGQRLAASQLALIKNLFQSIHAPLGDGAVS 177 Query: 200 LHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTV 259 PA + L+ +G P + + + + R++ RAR ++ EN+ P++V Sbjct: 178 RMDPAA--YFLNALVEHVGR-----PPRASIGVLDPRGHERIVRRARAFIHENLGSPLSV 230 Query: 260 LDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWG 319 + S RTL AF +L P +++ ++RL+ +R ++IS ++ T+ A WG Sbjct: 231 ERIATAAATSPRTLHRAFQMLLDETPYSYVLKLRLHRIRYDVISDTERTTTLATIANHWG 290 Query: 320 FWHLGQFATDYQQLFSEKPSLTLHQRMRE 348 LG+ + Y++LF E PS T + RE Sbjct: 291 ISELGRLSGWYRELFGELPSQTRRRLARE 319 >UniRef50_A6X646 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X646_OCHA4 Length = 318 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 10/229 (4%) Query: 118 AEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQ 177 A++ + E I + ++ + L + + N+ + Sbjct: 100 AQLVDAHSAIDLEFHPSTRMLIFSLNDTQ------IDILGGKEFIEQFTHNKRVVSFDTL 153 Query: 178 HKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQS 237 A + + ++ E + + L D+L+ ++ A L+ QP + + S Sbjct: 154 VGHAFYQLAHFVINEIEKDKEAFFHGGLSERLEDSLMASLAAALD-TQPRARPLTSAVPS 212 Query: 238 YRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAV 297 Y + RA +++L+N+ + +T+ +L + S RTL F ++ G P K +RL+ V Sbjct: 213 Y---VQRAEKFMLDNLDKQLTLQELVDATGTSARTLHRTFRSVRGNTPLGVFKNMRLDKV 269 Query: 298 RRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 EL+ + + AM W F H+G F+ DY+Q F PS T+ + Sbjct: 270 HAELVRGHAGPGDITRIAMAWAFNHMGLFSADYRQRFGYLPSETVRRAQ 318 >UniRef50_B3QGC9 Transcriptional regulator, AraC family n=5 Tax=Rhodopseudomonas palustris RepID=B3QGC9_RHOPT Length = 334 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 109/287 (37%), Gaps = 5/287 (1%) Query: 61 KFHGEFTEILLDDIQV-FREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAE 119 F G + + LD + F Y A+ + + + S + Sbjct: 52 GFEGFGSYVALDGTGLGFCAYAAPAVAEFDETDFARVQIALRGSSRTSSGPSSVEVDPEH 111 Query: 120 IATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHK 179 GT L DY + + ++ +T L + L S L ++ Sbjct: 112 WCVSSAGTPSRLEFGPDYQQMILRITSATLTTTLEALLGV-KPRGKLTFTSHLSCDDRGA 170 Query: 180 AALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYR 239 +AL +A + + P + + + L+++ ++ + + + Sbjct: 171 SALRDLALY-VARHVDPAAPVMPPFMLREMQQALVVSFLSVTRHNYSS-QLDRDARDTAP 228 Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 + A E++ + + +T++DL +V R+L AF G P A+ K +RLN R Sbjct: 229 DYVRVAEEFIEASWNRAITIVDLAAVTNVGVRSLFKAFQKHRGYSPMAFAKAVRLNKARE 288 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 L+S S +V A GF +LG FA DY++ E PS TL +R Sbjct: 289 MLLS-GDPSRSVTSVAFACGFTNLGHFANDYRRRHGELPSETLARRR 334 >UniRef50_UPI0001B4618F transcriptional regulator, AraC family protein n=1 Tax=Mycobacterium intracellulare ATCC 13950 RepID=UPI0001B4618F Length = 363 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 8/204 (3%) Query: 147 DVITRQANFLHNPDRVLHMLRNQSA--LEVKEQHKAAL--WGFVQQALATFCENPENLHQ 202 DV+ A LH H +Q L+ + + +AA+ W + T + Q Sbjct: 160 DVVVLAAEVLHAVAAEWHTALSQRTQFLKWRPRSRAAVRAWHRALDYVLTTLACADTAQQ 219 Query: 203 PAVRKVLGDNLLMAMGAMLEEAQPMVTA-ESISHQSYRRLLSRAREYVLENMSEPVTVLD 261 P + + + L GA+LE +T + + L A ++ + +E + + D Sbjct: 220 PMIAAGMANLL---AGALLECYPSNLTEQDPGGDGTLPETLKEAVSFIHRHTTEDIGIND 276 Query: 262 LCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFW 321 + +H++ R +Q F L P +++R+RL ELI+ + + TV + A +WGF Sbjct: 277 VAAAVHLTPRAVQYLFRRQLDTTPTEYMRRVRLRRAHLELIAASAGTSTVTEIAQRWGFA 336 Query: 322 HLGQFATDYQQLFSEKPSLTLHQR 345 H G+FA Y+Q + + P TL Q+ Sbjct: 337 HTGRFAVLYRQTYGQSPHTTLRQQ 360 >UniRef50_C9N369 Transcriptional regulator, AraC family n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9N369_9ACTO Length = 315 Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 85/206 (41%), Gaps = 14/206 (6%) Query: 143 VLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQ 202 + ++ R A N D + + + + + F++ + L Sbjct: 116 MFDPALLDRVAAAGANSDGPVRLTGQRPVDAAANRRLGSTVAFLRDQV---------LTG 166 Query: 203 PAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRR-----LLSRAREYVLENMSEPV 257 PAV ++ + + A+ A P +TA+ H++ R L RA+ ++ EN + Sbjct: 167 PAVEGLVVATAVQHLAAVTLSALPSITAQEEDHRTDSRDAHTETLRRAKAFIEENAHRTI 226 Query: 258 TVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQ 317 + D+ V+ R +Q AF P L+ +RL +L+ +V A Sbjct: 227 GLADIAAAAFVTPRAVQYAFSRHTDTTPLGHLRHVRLTRAHVDLVKADPHVSSVTRIAAA 286 Query: 318 WGFWHLGQFATDYQQLFSEKPSLTLH 343 WGF H+G+FA Y++ + P++TL Sbjct: 287 WGFPHVGRFAAAYRRHYGVTPAVTLR 312 >UniRef50_A5V7Y2 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V7Y2_SPHWW Length = 326 Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 54/238 (22%), Positives = 91/238 (38%), Gaps = 18/238 (7%) Query: 111 GSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQS 170 G + +G G DD + + + R A R ++R + Sbjct: 96 GEEWVGRRHGVCIAPGEPLHAEFTDDCEQIVFKVDARTLCRHA------GRKAPLMRQR- 148 Query: 171 ALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAM--GAMLEEAQPMV 228 +++ + A FV+ L+ V L + G +++ + Sbjct: 149 -IDLADTLFAPWRTFVRGMLSDPATVDFATSNTRVAAEYESLFLSTLLQGGLVDNGRADS 207 Query: 229 TAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAW 288 IS + RA Y+ ++ ++P+T+ D+ V RTL N F P Sbjct: 208 GIAPIS-------VKRAEAYIDDHFADPITLDDIAAAAGVPARTLLNGFRRFRDTSPIRA 260 Query: 289 LKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 L+ RL A L++ S ++ D A+ GF H G+FA Y + F EKPS TL +R Sbjct: 261 LRERRLTAAHERLLAAESDQ-SILDIALDVGFGHPGRFALAYTERFGEKPSTTLRRRR 317 >UniRef50_B4EDN0 AraC family regulatory protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4EDN0_BURCJ Length = 363 Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 52/238 (21%), Positives = 89/238 (37%), Gaps = 11/238 (4%) Query: 116 GSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVK 175 G +L V L ++ + + H R + Sbjct: 131 GPGTTVLSVASDRPRFHYDPATEVLKVQLDHRRVSAACWRM-----MRHPGRAPLRFDAA 185 Query: 176 EQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISH 235 + AL + L F N A+R+ L ++ + L + QP + Sbjct: 186 MRDSHALTRWF--MLLDFVMTTLNESDAALREYLAPSIEEMLTVTLLDTQPHNYTAELHR 243 Query: 236 QS---YRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRI 292 S + L RA E++ + + +T+ ++ S R+L AF A P L + Sbjct: 244 SSGVIAPKQLRRAVEFMEARLGQALTLAEIAEAADCSIRSLSRAFSAFRQTTPMQHLNHL 303 Query: 293 RLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 RL VR EL+S + T+ A+++GF HL F Y++ + E PS T +R R+ Sbjct: 304 RLEKVRSELLSDADAATTISTIALRYGFGHLSAFNQQYRRRYGETPSQT-RKRARDGA 360 >UniRef50_Q9AJR3 Transcriptional activator n=2 Tax=Proteobacteria RepID=Q9AJR3_BURST Length = 321 Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 17/238 (7%) Query: 112 SQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVIT--RQANFLHNPDRVLHMLRNQ 169 E + +D L V L +V+ R P + LR Sbjct: 98 RHQFKPGEFLLVNPSDPIRVRYSNDCEKLIVTLPVEVLEAMRFEERQSWPHDGIRFLRPV 157 Query: 170 SALEVKEQHKAALWGFVQQALATFCENPENLH-QPAVRKVLGDNLLMAMGAMLEEAQPMV 228 AL + + L+ CE E+ PA+++ LL + + LE Sbjct: 158 HALSSVDG--------LAGLLSLMCEEAESTTCTPAIQQHYAQILLRKLLSQLETNTVDA 209 Query: 229 TAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAW 288 + S ++ S+ ++Y+L N+ E +T+ ++ + +VS R L F+ P + Sbjct: 210 RSPGDS-----QVFSKIKDYILANLQENITLEEIASLANVSLRKLYVLFNIHAQESPRDF 264 Query: 289 LKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 ++ ++L VR +L S V D AM++GF HLG+F+ Y+ F E PS TL + Sbjct: 265 IQSLKLGRVRADLQRARP-SDNVTDIAMRYGFSHLGRFSAVYKARFGELPSQTLGRSR 321 >UniRef50_C4DJB3 DNA-binding domain-containing protein, AraC-type n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DJB3_9ACTO Length = 362 Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 92/256 (35%), Gaps = 5/256 (1%) Query: 93 PNSFWFGIPATRGEQGFIGSQCLG-SAEIATRPGGTEFE-LSTPDDYTILGVVLSEDVIT 150 + + IP + + + L + G + + +L V + + Sbjct: 101 RDRYLILIPLGGAAEINVDGESLAVYPTLGCVVGACGPVRMGWSANCLMLVVRVERGALE 160 Query: 151 RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLG 210 + + +R +SA++ +A W + + + P L Sbjct: 161 AELRERIGGTGPVP-IRFESAMDFASGLRAGWWRQLTHLVEDLDADSALPRHPLCVGGLE 219 Query: 211 DNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSR 270 L++ + + R++ RA + P T L + + Sbjct: 220 SGLMLGLLVAQPHNHSERLRAAHPAIGEHRIM-RAVAILEREPQRPWTTAGLAREAGIGV 278 Query: 271 RTLQNAFHAILGIGPNAWLKRIRLNAVRRELISP-WSQSMTVKDAAMQWGFWHLGQFATD 329 R L F +L P A+L+ +RL V REL P + +TV A WGF HLG+FA Sbjct: 279 RALYTDFRRVLDTSPMAYLRNVRLRRVHRELRQPSRNTGVTVAKVATTWGFSHLGEFAAA 338 Query: 330 YQQLFSEKPSLTLHQR 345 Y++ + E PS TL + Sbjct: 339 YRRFYGENPSATLRRA 354 >UniRef50_B9K3F5 Transcriptional regulator AraC family n=1 Tax=Agrobacterium vitis S4 RepID=B9K3F5_AGRVS Length = 323 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 93/254 (36%), Gaps = 9/254 (3%) Query: 93 PNSFWFGIPATRGEQGFIGSQC--LGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVIT 150 + P + G G + + + P T +++ ++ I Sbjct: 77 SDLVTIRFPISGGLARKDGREEVNIDRGQGVIIPFRDMEYERTSRSASMISCTIASVSIF 136 Query: 151 RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLG 210 ++ L+ +R ++V + + ++ + H P ++ Sbjct: 137 QKMQALYGEER-STFASFVPVVDVNIPQIRIFRTALLRLHDNLQQHGD--HNPLSFPIVE 193 Query: 211 DNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSR 270 + L+ + L + Q R+L A +Y+ N++ P+TV ++ VS Sbjct: 194 ELLVFHL---LSCWPTTAAVRPTADQVNNRVLRNALDYIEANLASPITVSEIAFAAGVSV 250 Query: 271 RTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDY 330 R+LQ AF GI P ++ RL+ V L ++ + A WGF H F+ Y Sbjct: 251 RSLQIAFRESKGITPVQYIIECRLDRVHDALKRGFAPGY-ISQIANAWGFQHHADFSRRY 309 Query: 331 QQLFSEKPSLTLHQ 344 ++ F E P T + Sbjct: 310 RKRFGETPKQTRTR 323 >UniRef50_Q9KW95 Riorf89 protein n=2 Tax=Agrobacterium rhizogenes RepID=Q9KW95_AGRRH Length = 194 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 5/168 (2%) Query: 178 HKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQS 237 AAL V + + + L A+ ++ ++ + P + E + Sbjct: 32 RLAALGHLVWSCVN--LSDVDRLPPAAIERLFQATMIALLEVAPNSYMPRL--ERPVSPA 87 Query: 238 YRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAV 297 + RA +Y+ N+++ +TV + ++ S R LQ AF G P +L+ IRL A Sbjct: 88 VPWHVKRAIDYMHANLAQSITVALIAAEIGTSVRALQAAFQRFKGTTPLGYLRTIRLEAA 147 Query: 298 RRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 RR L+ S ++ DAA GF H+G+FA Y Q F E PS TL R Sbjct: 148 RRALV-GDGGSRSISDAARNAGFSHMGRFAAAYYQAFGETPSETLRIR 194 >UniRef50_A6VRG8 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VRG8_MARMS Length = 319 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 53/238 (22%), Positives = 102/238 (42%), Gaps = 10/238 (4%) Query: 106 EQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHM 165 EQ G + L + + FE + D L V + D + + A L Sbjct: 88 EQHQNGRRILKAGDSIFIMPKNRFEANDSADCRKLIVKIPTDFLHQTAREF-GYLFPLDP 146 Query: 166 LRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQ 225 +R +S + L+ + L + + L + +L Sbjct: 147 IRFESKVSQFPLTGP-LFNLLNDILQQDKDE-------LYERALIYYCRLLNSGILNMFD 198 Query: 226 PMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGP 285 V ++ +S R + R R YVL+N++ + + +L + +SR++L N F G+ P Sbjct: 199 SNVGPSTLPKKSLHRHIERIRNYVLDNITTDIAIDELAHLCQISRKSLYNLFERETGLTP 258 Query: 286 NAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 +A+++R++L ++ EL + + V A+++GF +LG+F+ Y++ E PS TL Sbjct: 259 SAYIRRLKLESIHSELKN-NERIKNVTQVALKYGFTNLGRFSAQYREQIGELPSQTLR 315 >UniRef50_Q5LPA0 Transcriptional regulator, AraC family n=1 Tax=Ruegeria pomeroyi RepID=Q5LPA0_SILPO Length = 348 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 58/333 (17%), Positives = 110/333 (33%), Gaps = 19/333 (5%) Query: 24 TPKVEVDNVHQRQTTDVYEH----ALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFRE 79 + HQ +T D+ E A + Q F + +F Sbjct: 21 PDTPPLSRFHQFRTADLDEARALVARNFCGHRLE-RQAREDAFDAC--QNRAGGNGLFYN 77 Query: 80 YTGLALRQSCLVWP--NSFWFGIPATRGEQGFIGSQCLGSAEIA--TRPGGTEFELSTPD 135 Y + + +P G + + + Sbjct: 78 YIRYGADVEIEPGELGSFYLIQVPIRGQALIRNGRTEVETGSAIASVLNPDRHTRMRWLA 137 Query: 136 DYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCE 195 + + + + +T A L + +R ++ ++A++ Sbjct: 138 GCEQVLLQIDRNRLTAVAETLTGTA-LQSPVRFDPQIDRARPEMQRWLALFRRAVSAVDH 196 Query: 196 NPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQ---SYRRLLSRAREYVLEN 252 A+ + L ++ + A AQP A + + RAR+++ + Sbjct: 197 GALLDPDQALSRALVED---ELIAGFLRAQPSSIAPLLERPETGPLSPHVRRARDFMQAH 253 Query: 253 MSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVK 312 +++P+T+ + S R LQ F +L + P A+L+ +RLN R L+ +T+ Sbjct: 254 LADPLTLSQIAAAAGTSPRNLQLGFSQLLEMTPLAYLRVLRLNYARY-LLRESPPQVTIA 312 Query: 313 DAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 A GF HLG+F+ Y F E PS T Q Sbjct: 313 SIAGAAGFSHLGRFSAQYAARFGEGPSQTRKQH 345 >UniRef50_A5V5G7 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V5G7_SPHWW Length = 334 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 52/234 (22%), Positives = 86/234 (36%), Gaps = 14/234 (5%) Query: 112 SQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSA 171 +G + G E + D V +S + + F H + L + + Sbjct: 115 EYSIGGSSAHIMIPGEEMLGTFSSDCEQFFVRISTEAVRAHTGFRHLVFQKELDLTSPAV 174 Query: 172 LEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAE 231 + Q +A NP + +L + + +L Q Sbjct: 175 MPW------------LQQVALIAANPRMAQMISNHPLLSSDYERLLLNLLLAGQSHCERN 222 Query: 232 SISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKR 291 Q + RA Y+ N P+++ D+ V RTL ++F P +LK Sbjct: 223 DAPGQIAPASVRRAEAYIHANAGAPISLSDIAVAAGVPARTLLDSFKHFRQTSPIRYLKD 282 Query: 292 IRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 +RL+ R L + T+ + A++ GF HLG+FA DY + F E PS T R Sbjct: 283 VRLDNARERLRHRGAD--TIAEVALEAGFAHLGRFAADYFKRFGELPSDTQRSR 334 >UniRef50_Q05X95 Transcriptional regulator, AraC family protein n=1 Tax=Synechococcus sp. RS9916 RepID=Q05X95_9SYNE Length = 342 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 63/296 (21%), Positives = 103/296 (34%), Gaps = 17/296 (5%) Query: 56 QLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGE-QGFIGSQC 114 QL PG G F+ + L ++ V T L + + F + T + Q Sbjct: 55 QLSPGPLAGRFSMVHLGNLSVLMISTNQVLLLNGERGHHCIGFSLEVTGNTTDQRVQCQT 114 Query: 115 LGSAEIATRPGG-TEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALE 173 + E + V + D P + +L + + L Sbjct: 115 FHPHALYGFNQNLQECHFQLSAGSISIITVTTSDFFNAFLTRTGYPHLIEPLLTS-NCLN 173 Query: 174 VKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQ-PMVTAES 232 + + L + + L H P ++ + + L+ Q P E Sbjct: 174 LDQATHRRLANQLGEVLR---------HPPTSQRACRQRTQELLTSFLDCLQSPTGELEP 224 Query: 233 ISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRI 292 S ++L+ + + N +T+ ++C QL+ SRRTL GP L+ I Sbjct: 225 FDLTSRQQLVQEFVRWGISNAKTSLTLDEICQQLYTSRRTLILGTKENFHCGPMELLRTI 284 Query: 293 RLNAVRRELISPWSQSM----TVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 RL V L SP + V + A GF G FA YQ+ F+E P TL + Sbjct: 285 RLQQVHALLRSPAERDREGLSQVSEVAAFCGFRSRGHFAKAYQEHFAESPRTTLLR 340 >UniRef50_A5EL73 Transcriptional regulator, AraC family n=2 Tax=Bradyrhizobium RepID=A5EL73_BRASB Length = 349 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 50/233 (21%), Positives = 89/233 (38%), Gaps = 4/233 (1%) Query: 115 LGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEV 174 + +IA P G ++++ + L + L + ++ L + Sbjct: 120 VTDQQIAVAPAGVPWQMACQGGHRRLTLRLEPQALRQRLAALVGVQPRADYAIGSAIPAN 179 Query: 175 KEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESIS 234 ++ L + L T + AV + L + + +A + Sbjct: 180 DPHARSLLR--LLDFLGTQLNEQDAAFPAAVYRELEEAVQVAFLCASRHRFRDALIDPAP 237 Query: 235 HQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRL 294 + L+ R +Y+ N EP+T+ L + VS R++ F + G P A+ K +RL Sbjct: 238 MPDFG-LVKRLEDYIEANWREPITIERLVREAGVSARSIFRVFERVRGYSPIAFAKSVRL 296 Query: 295 NAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 L S S+TV AA F + G FA Y+ F E PS+T+ + R Sbjct: 297 RRAHEMLRS-GDPSVTVAAAAAACNFANPGHFARYYRATFGELPSVTMARAER 348 >UniRef50_C5CKJ0 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CKJ0_VARPS Length = 329 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 57/249 (22%), Positives = 97/249 (38%), Gaps = 10/249 (4%) Query: 98 FGIPATRGEQGFIGSQCL--GSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANF 155 IP + Q L S + A + L + + ++ A+ Sbjct: 82 IQIPLSGSADIVCDGQALSLDSGQSALLSPRRALRVRWSPGSEQLLLRVPHALLRATASD 141 Query: 156 LH-NPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLH--QPAVRKVLGDN 212 PD + L + ++ A W + Q+L + E+ PA + Sbjct: 142 TGLGPDAASGAPPWPAPLAIIDRVAGARWRPIVQSLIALGPSTEDARGAHPAWERHCETG 201 Query: 213 LLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRT 272 L + + + E A H +L A Y+ N++ P+ + D+ VS RT Sbjct: 202 LALFLLTLASEQAGAGLAAPCGHSG---VLKAAGRYIQANLASPIALGDVAQAAGVSERT 258 Query: 273 LQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQ 332 L G+ P AWL+ RL+A R +L + ++ + A++ GF HLG+FA Y++ Sbjct: 259 LHTHVTRAFGVRPMAWLRLQRLDAARAQLRRGEAP--SIAEVALRCGFAHLGRFAAYYRE 316 Query: 333 LFSEKPSLT 341 F E PS T Sbjct: 317 RFGELPSET 325 >UniRef50_Q0FPK9 Transcriptional regulator, AraC family protein n=3 Tax=Rhodobacteraceae RepID=Q0FPK9_9RHOB Length = 348 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 75/186 (40%), Gaps = 8/186 (4%) Query: 158 NPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCEN-PENLHQPAVRKVLGDNLLMA 216 +V + + + G ++ + P +HQPA D Sbjct: 148 GQGKVFPGVATDPLVPISTSALEGFRGLMRYLFSDLSSPAPTLVHQPA-----SDLFAAL 202 Query: 217 MGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNA 276 + L A+ S L+ RA +Y+ + +P+TV + + + VS R LQ+A Sbjct: 203 VLEHLRHLLASDGADPALDGSQDDLVRRALDYMSAYVGDPLTVRTIADAVGVSTRRLQDA 262 Query: 277 FHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSE 336 F G P L IRL R L++ +V A GF HLG+F+ Y+ + E Sbjct: 263 FRLKTGRTPWEHLTGIRLENARTRLLAAAGP--SVTAIAFDCGFSHLGRFSQTYRNTYGE 320 Query: 337 KPSLTL 342 PS+TL Sbjct: 321 APSVTL 326 >UniRef50_D2M666 Transcriptional regulator, AraC family n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2M666_RHOPA Length = 328 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 59/334 (17%), Positives = 120/334 (35%), Gaps = 33/334 (9%) Query: 31 NVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCL 90 + ++D+ E A ++ A G+ F D++ VFR + L Q L Sbjct: 5 RFPEIVSSDIDELAASLIA-------NAGGR---RFDFEKSDELFVFR-VNAVRLTQVGL 53 Query: 91 VW---PNSFWFGIPATRGEQGFIGSQCLG--------------SAEIATRPGGTEFEL-S 132 +W N AT + + A P ++ + Sbjct: 54 IWIATNNKVTVNFGATEYARRVFQLRNSAQVQIGRQRIDCTPLDAGFIVPPDCEDWSVEY 113 Query: 133 TPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALAT 192 + L + + + ++R+ L D + +Q + + AL A Sbjct: 114 GKGGFECLSLRVDGEALSRKLQTLTGLDSTPTVTLSQP--NRNDVRRDALLRQAVCQFAI 171 Query: 193 FCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLEN 252 + + P L+ Q + + + S + ++R +Y+ N Sbjct: 172 ELDEFGDHFTPHAIAEFEHELIFRFLLHTNHNQNHLLERTPTLGSAGQ-MARIEDYIYAN 230 Query: 253 MSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVK 312 + + + L + VS RT+ F A P+ +++++RL+ R+ L+ + +T+ Sbjct: 231 WDKQLDIDQLAHVASVSGRTIFRMFRARHSCSPHHFIQQVRLHRARQLLLEA-ADGLTIS 289 Query: 313 DAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 A + GF + G FA Y+ +F E PS T+ + Sbjct: 290 GVAFRCGFTNPGYFARSYRDIFGELPSDTVKRPR 323 >UniRef50_Q07KT1 Transcriptional regulator, AraC family n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07KT1_RHOP5 Length = 328 Score = 140 bits (352), Expect = 9e-32, Method: Composition-based stats. Identities = 57/295 (19%), Positives = 102/295 (34%), Gaps = 6/295 (2%) Query: 56 QLHPGK-FHGEFTEILLDDIQV-FREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQ 113 Q+ G F G I V F Y A+ G+ Sbjct: 38 QISHGPDFFGRANCIEHAATSVSFCSYGSEAVVDFPEADFARLQIGLQGFASTTSAGDVT 97 Query: 114 CLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALE 173 + + Y L + + + + + + R L + L Sbjct: 98 EIHPEVGCISSPNQAATVRFGHGYEQLVLRIQNATLEDRLSRVVGF-RPKGALHFDAVLR 156 Query: 174 VKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESI 233 + +L V + ++ L P V L + ++ + ++ Sbjct: 157 CDQPKAESLRQLVLFFASQLQQHAAAL-PPLVVAELEQAITVSFLTATRHNFSGL-LDAD 214 Query: 234 SHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIR 293 + + A E++ + ++P+T+ L ++ VS RTL AF G P+A++K+ R Sbjct: 215 AKDGAPDHVRIAEEFIEAHWNQPITIEKLTDETTVSSRTLLRAFLKHRGYSPHAFVKQTR 274 Query: 294 LNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMRE 348 LN ++ L +V A GF + G FA DY++ F E PS TL + R Sbjct: 275 LNRSKQILER-GDPVTSVTSVAYACGFGNPGHFAKDYREAFGELPSDTLARAKRR 328 >UniRef50_C5CZK1 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZK1_VARPS Length = 341 Score = 140 bits (352), Expect = 9e-32, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 84/250 (33%), Gaps = 8/250 (3%) Query: 100 IPATRGEQGFIGSQCLG--SAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQA--NF 155 +P G L + A L D L + + + A F Sbjct: 84 MPLRGHADVHTGGHTLQIHPGQGAVISAHKPVRLHWHADCEQLILKIELSRLQEVARHAF 143 Query: 156 LHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLM 215 + + + + V + + P DNL++ Sbjct: 144 ALRGTDDVGEIDFAMPFCLDDAAGTQWCRMVAGLASLLPSGDLGTYDPRWMAHCEDNLML 203 Query: 216 AMGAMLEEA--QPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTL 273 + + Q S ++ R L RA E++ E + +++ D+ V+RR+L Sbjct: 204 YLLCHRPNSALQRHAAVRRGSEEAGLRQLRRAEEFMRERLDTLLSLEDVAQATGVTRRSL 263 Query: 274 QNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQL 333 F + P L+ +RL+A +L +V + A+ GF HL +FA Y++ Sbjct: 264 ALLFKRYRDLSPGEVLRNMRLDAAHAQL--ARHDGASVTEVALSCGFSHLSRFAACYRER 321 Query: 334 FSEKPSLTLH 343 F + P T Sbjct: 322 FGQLPRDTSR 331 >UniRef50_Q13EW4 Transcriptional regulator, AraC family n=5 Tax=Rhodopseudomonas palustris RepID=Q13EW4_RHOPS Length = 329 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 65/320 (20%), Positives = 116/320 (36%), Gaps = 11/320 (3%) Query: 30 DNVHQRQTTDVYEHALTITAWQ----QIYDQLHPGKFHGEFTEILLDDIQV-FREYTGLA 84 T+D E A + W + ++ G F I L DI + F Sbjct: 11 SEFRALDTSDPVELAQAL--WTVYGVRHFEAPPAGHFRIRGNFIQLQDIALGFTSGHAPL 68 Query: 85 LRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVL 144 G+ + + + S + G + Y L + + Sbjct: 69 TVDFPEADFARLQIGLAGQASTRSAGVTTAVDSRQGCITSPGRTARTEFGETYEQLLLRV 128 Query: 145 SEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPA 204 + R+ + L + + + A A L + +++ +P Sbjct: 129 KNGALERKLSALLGT-KPKRTIEFEPAATNDLPQAANLRRMIA-FVSSQINSPSAPLPAL 186 Query: 205 VRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCN 264 V L D + + + + E+ S + + + + EY+ N +P+T+ L + Sbjct: 187 VLAELQDAITLLLLSTYRHNFSR-FLEADSPTAAPKHVRKIEEYIEANWMKPITIETLVD 245 Query: 265 QLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLG 324 +S R + F G P A+ K++RL R L +Q+ TV AA GF +LG Sbjct: 246 LTGISARGVFKTFQRNRGYSPMAFAKQVRLQHARAMLTQGRTQT-TVTAAAFACGFANLG 304 Query: 325 QFATDYQQLFSEKPSLTLHQ 344 FA DY++LF E+PS TL + Sbjct: 305 HFAKDYRELFGERPSETLGR 324 >UniRef50_Q1QJ52 Transcriptional regulator, AraC family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QJ52_NITHX Length = 367 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 68/294 (23%), Positives = 111/294 (37%), Gaps = 7/294 (2%) Query: 56 QLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCL 115 QL GK G + + + + + L +R G+ + ++ + + Sbjct: 31 QLGHGKMRGTLSHVGIGEFSLSVGSFNLGVRTQRTSSDEKLIVGMLLSAKDRVTHFAFDM 90 Query: 116 GSAEIATRPGGTEFELSTPDDYTILGVVLS-EDVITRQANFLHNPDRVLHMLRNQSALEV 174 A++ P E + + + DV++ A D +N+ Sbjct: 91 RPADVLVIPPAIEHDGIFHGASSYAALRFDLSDVVSMFAGEARLSDPATWYEKNRYRANQ 150 Query: 175 KEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESIS 234 Q A + LA + ++ + D + Q + E+ + Sbjct: 151 SAQTATARLPQIVSRLAQHQDALTEASADFWKRAIVDCFTATI------FQSLPPDETRT 204 Query: 235 HQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRL 294 S RL+ +Y+ + PV V +LC VSRR L AFH + G+GP +L+ RL Sbjct: 205 LPSALRLVHNVEDYLAAADARPVHVSELCAAFRVSRRGLHRAFHDVFGVGPVTFLRHKRL 264 Query: 295 NAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMRE 348 A+ LI TV A+Q GF LG+F+ Y LF E PS TL R E Sbjct: 265 CAIHSALIDSSPGDTTVAKVALQQGFVELGRFSHYYHALFGEYPSETLELRGAE 318 >UniRef50_Q05092 XylDLEGF operon transcriptional activator 2 n=2 Tax=Pseudomonas RepID=XYLS2_PSEPU Length = 157 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 52/100 (52%) Query: 243 SRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELI 302 R +++ EN+ +++ L +S R+L F G P +++ +L VR L Sbjct: 39 ERVVQFIEENVKRSISLEQLAELALMSPRSLYTMFEKHTGTTPMNYIRNRKLECVRACLS 98 Query: 303 SPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 +P + ++ + A+ +GF HLG+FA Y+ F E PS TL Sbjct: 99 NPTTNIRSITEVALDYGFLHLGRFAEKYRSTFGELPSDTL 138 >UniRef50_A5CMT0 Putative transcriptional regulator, AraC family n=2 Tax=Clavibacter michiganensis RepID=A5CMT0_CLAM3 Length = 393 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 57/222 (25%), Positives = 82/222 (36%), Gaps = 8/222 (3%) Query: 122 TRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAA 181 P G F + L V + + + A LH L + A Sbjct: 179 LLPSGRSFSFRSEPAVQNL-VHIDANFLEETAAELHEGR--SRPLVFDHTRPPSPEQTTA 235 Query: 182 LWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRL 241 V +A + P +R G + A + +AE + + Sbjct: 236 WRHAVGEASPVLQDATS---SPLLRMQAGLLVARATLELFPWHDVPFSAEMRAPRMSA-- 290 Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 + A EY+ + P+T D +S R LQ A P+A L+ IRL+ V EL Sbjct: 291 VRAAIEYLHHHADRPITPADAARAAGISTRVLQLAVRRHEDTTPSALLRGIRLDRVHAEL 350 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 + TV+ A QWGF HLG+FA Y + F E PS TL Sbjct: 351 RDASPTTTTVRAVAEQWGFGHLGRFAASYSERFGELPSATLR 392 >UniRef50_C4RJP1 AraC family transcriptional regulator n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RJP1_9ACTO Length = 359 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 53/213 (24%), Positives = 80/213 (37%), Gaps = 5/213 (2%) Query: 134 PDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATF 193 D ++ + L + R A LR Q L V A LW ++ L Sbjct: 150 HRDMEVVALELPLAEVRRVAQ--ERCGIAPVNLRFQGLLPVSPAA-AGLWRDTRRYLTRV 206 Query: 194 CENPENL-HQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLEN 252 V+ L + + RA Y+ E+ Sbjct: 207 VLPDTAFGANALVQAEALRLLAAVALSTFPNTTMTEAPTRGDGAIAPAAVRRAVAYIEEH 266 Query: 253 MSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQ-SMTV 311 + +TV D+ + R LQ AF L P +L+R+RL V R+L + +TV Sbjct: 267 ADQALTVTDVAIAARLGARALQQAFRRYLDTTPTLYLRRVRLERVHRDLQAAEPGAGLTV 326 Query: 312 KDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 A +WGF HLG+FAT Y++ + PS TL + Sbjct: 327 AAVAARWGFVHLGRFATQYRRAYGRSPSQTLRE 359 >UniRef50_UPI0001909603 transcriptional regulator, AraC family protein n=2 Tax=Rhizobium etli RepID=UPI0001909603 Length = 330 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 75/183 (40%), Gaps = 1/183 (0%) Query: 162 VLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAML 221 ++ + ++ VQ + N LH P L L + ++ Sbjct: 146 LIGAMELLPVIDFSTAAGQLFGNLVQTIILGMRNNGPLLHSPIAMSNLTQALADLVVRLI 205 Query: 222 EEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAIL 281 + I H R + RA +++ N+++P+T+ + VS R+L+ F Sbjct: 206 PNRLSHLLDNKI-HLIAPRHVRRAIDFMYANIAQPLTMQSVAEAAGVSIRSLEVGFRDFK 264 Query: 282 GIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 G P A+L+ +RL+A R +L P ++ + + LG+F+ Y+ + E PS T Sbjct: 265 GTTPAAYLRSLRLHAAREDLRDPLNRQPFARHLPEVGNSFTLGRFSALYRAAYGENPSDT 324 Query: 342 LHQ 344 + Sbjct: 325 RRR 327 >UniRef50_A1T1Y4 Transcriptional regulator, AraC family n=1 Tax=Mycobacterium vanbaalenii PYR-1 RepID=A1T1Y4_MYCVP Length = 317 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 48/202 (23%), Positives = 82/202 (40%), Gaps = 5/202 (2%) Query: 142 VVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLH 201 +VL +++ + A+ D + S V E+ L + N Sbjct: 120 IVLDRNLLAQVAS--GGLDAAGEPVDLTSLAPVSEEANRHLADVMSHLRRDVASNAHAAS 177 Query: 202 QPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLD 261 QP V G L G +L A S RLL RA ++ +N + +++ D Sbjct: 178 QPLVT---GPLLRYLAGCVLAAFPNTAAAPPRVQDSSPRLLERALAFIDDNADKDISLGD 234 Query: 262 LCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFW 321 + V+ +++ F L P +L+++RL+ R+LI+ + TV D A +WGF Sbjct: 235 IAAAARVTPQSVAAMFRRHLSCTPKEYLRKVRLDHAHRDLIANNPATATVADIAARWGFG 294 Query: 322 HLGQFATDYQQLFSEKPSLTLH 343 + FA Y+ + P TL Sbjct: 295 VVEAFAVYYRGRYGVHPETTLA 316 >UniRef50_A3K773 Transcriptional regulator, AraC family protein n=1 Tax=Sagittula stellata E-37 RepID=A3K773_9RHOB Length = 321 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 83/210 (39%), Gaps = 8/210 (3%) Query: 135 DDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFC 194 + + L + + + R A L + + ++A++ + ++ + Sbjct: 112 EGCSQLLLQIDAQQLNRVAERLIGRA-LSGPVTFRTAVDQRVPEVDKWVHKLRTCFSLAE 170 Query: 195 ENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRR---LLSRAREYVLE 251 + + L + + QP + ++ R + RA +Y+ Sbjct: 171 KEAIYAKGNLHTQALVE---EQLIEGFLLCQPSDLSGPLTKDIDRAGNLYVRRAMQYIHR 227 Query: 252 NMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTV 311 N+ +TV D+ + L +S R+LQ +F A LG+ P +L+ RL L + ++ Sbjct: 228 NLGAAMTVGDIADALGISPRSLQLSFKAELGMTPMQYLRDARLREAHAMLKTGSDMG-SI 286 Query: 312 KDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 D G H G+F+ +Y++ + E P T Sbjct: 287 GDICEHVGIAHCGRFSVEYKRRYGESPHET 316 >UniRef50_A6EXV2 BenABC operon transcriptional activator BenR n=2 Tax=Marinobacter RepID=A6EXV2_9ALTE Length = 318 Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 45/229 (19%), Positives = 101/229 (44%), Gaps = 9/229 (3%) Query: 115 LGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEV 174 + S + +L DD L + + E V+ H + ++ +E+ Sbjct: 96 VRSGQAVMVNPYESIDLEYSDDCEKLIIKVPEHVLNNARELAHGRLPENGIRFTRAPVEL 155 Query: 175 KEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESIS 234 + AL ++ L+ + ++ P + +L + + P + S Sbjct: 156 R--LCPALINIMEAVLSELDDAEDDDINPVCAP-YREIILKKLLKVF----PSNWSSQES 208 Query: 235 HQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRL 294 + +L + Y+ +N+ + + +L + ++S R++ NAF P ++K+++L Sbjct: 209 GAACTPMLGKMLRYIEQNVHRNIDIEELSSVSNMSVRSIYNAFSKAFATTPKCYIKQLKL 268 Query: 295 NAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 +R +L+ ++ V + A+ +GF HLG+F++DY++ F E PS T+ Sbjct: 269 QKLREDLLQGKCRN--VTEIALDYGFSHLGRFSSDYRKTFGELPSETMR 315 >UniRef50_Q2IVS4 Transcriptional regulator, AraC family n=2 Tax=Rhodopseudomonas palustris RepID=Q2IVS4_RHOP2 Length = 336 Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 59/338 (17%), Positives = 110/338 (32%), Gaps = 29/338 (8%) Query: 24 TPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGL 83 P + + +T D A + W + L + G F+ + E + Sbjct: 14 PPTELLKDFAILRTNDPDT-ARKLV-WSRFGLNLSTPRIEGFFSRANIA------ELPNV 65 Query: 84 ALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLG-------------SAEIATRPGGTEFE 130 +L IP ++G + + G PG Sbjct: 66 SLY--FCANSTPVALQIPNSKGAHVHLCLRGRGTLIHDRRRIEIGEGEAFVCSPGKPAL- 122 Query: 131 LSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQAL 190 L Y L + + ++ R L + + + + H A V Sbjct: 123 LDFAAGYEELALHVPVPMLERTFAALTGLGP-HTTIAFEPEIITDDPHYAGFRDLVLLLA 181 Query: 191 ATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVL 250 + + + ++ + + + ++ E + L+ A Y+ Sbjct: 182 GSLDAAFSAWPKATIAQLELACVSQLLYCTSHNLRRVLCPEDFG--AVPSLVRIAEHYIE 239 Query: 251 ENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMT 310 +V D+ VS TL F G P A++KR +L R+ L S + T Sbjct: 240 SRCESDASVDDIARACAVSVSTLTRMFMKYRGYSPAAFIKRAKLARARQLLESRAAS--T 297 Query: 311 VKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMRE 348 V A++ GF + +FA DY++ F E P+ TL +R + Sbjct: 298 VVGVALRCGFANPSRFAKDYREAFGESPTETLRRRRPQ 335 >UniRef50_A3PHN4 Helix-turn-helix-domain containing protein, AraC type n=2 Tax=Rhodobacter sphaeroides RepID=A3PHN4_RHOS1 Length = 325 Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 102/258 (39%), Gaps = 7/258 (2%) Query: 93 PNSFWFGIPATRGEQGFIG--SQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVIT 150 P+ +P + IG + G +T + + + Sbjct: 71 PDRLTLLLPRAGRLRVRIGPAEHGVTPGCPMAFRPGERVTDATAGRDGLFAAITLQVPAA 130 Query: 151 RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLG 210 R + L L A+ ++ + +A+ + + P+ P V + Sbjct: 131 RVRALAEAAELPLQDLLGPDAVALRARLEASALEGMARLACDLFLRPKTALPPGVALAIT 190 Query: 211 DNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSR 270 D + + A+++ +S + A E + + EP+++LDL +L + Sbjct: 191 DFVDAQLLALMDGRPAPARCRVLSA---FHRVRAAEEIMHAHSEEPLSMLDLARRLDIGL 247 Query: 271 RTLQNAFHAIL-GIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATD 329 R+LQ AF + G+ P RIRL+ R+ L++ S + V A+ GF HLG+FA Sbjct: 248 RSLQLAFREVHDGLSPREVYSRIRLDRARQRLLAA-SGADRVTTIALDSGFGHLGRFAMA 306 Query: 330 YQQLFSEKPSLTLHQRMR 347 Y + F E PS TL +R R Sbjct: 307 YARTFGELPSETLARRRR 324 >UniRef50_Q0S6X8 Transcriptional regulator, AraC family protein n=3 Tax=Rhodococcus RepID=Q0S6X8_RHOSR Length = 335 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 50/219 (22%), Positives = 90/219 (41%), Gaps = 9/219 (4%) Query: 127 TEFELSTPDDYTILGVVLSEDVITRQAN--FLHNPDRVLHMLRNQSALEVKEQHKAALWG 184 ++ + D+ L + + ++ A + +P +L V + Sbjct: 118 VDYLVEFSPDHVQLNLTVPHTLLADTAVRWWGFDPGGLLW-----QRKCVIGGGGSGWQA 172 Query: 185 FVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSR 244 + A+ T E P + + + L + L+ + A+ V + + + + Sbjct: 173 LLGYAMRTTGELPGHATEGRIGLNLQELLVGHLLTEW-AARAGVDPDRSTGPAAPGYVRH 231 Query: 245 AREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISP 304 A +Y+ E E T D+ + + VS RTL AF L P +++ RL +R EL++ Sbjct: 232 AVQYIREYARELPTASDIADAVGVSVRTLSGAFRKYLDTTPAEYVREQRLQGIREELLTA 291 Query: 305 WSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 S TV A WG+ +LG FA Y++ F E PS T Sbjct: 292 -SPGETVASIAGAWGYVNLGLFAAAYRRRFGENPSQTRA 329 >UniRef50_A9EZ15 Transcriptional regulator, AraC family protein n=2 Tax=Phaeobacter gallaeciensis RepID=A9EZ15_9RHOB Length = 335 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 60/252 (23%), Positives = 96/252 (38%), Gaps = 8/252 (3%) Query: 96 FWFGIPATRGEQGFI-GSQCLGSAEIATR-PGGTEFELSTPDDYTILGVVLSEDVITRQA 153 + IP + GS + SA AT + + D L + + + A Sbjct: 83 YLLQIPLSGQASVRHRGSDIIASASTATLLNPDRDTTMQWGADCRKLLLQIDRGYLETVA 142 Query: 154 NFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVL--GD 211 + + + +R S +++ + L V A E L + Sbjct: 143 RQIIRAE-LPGPIRFASRIDLHSEGGRRLRQMV-CACVQAAEAGVLFQGALSGSDLRVEE 200 Query: 212 NLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRR 271 +L A+ L + E H S + A EY+ N+S P+ + D+ + ++ R Sbjct: 201 DLARALLTRLPSNISHIV-ERADHGSLPPGIRAAVEYIHANLSNPIQLSDIAAHVDLNIR 259 Query: 272 TLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQ 331 TLQN F G P L+ RL+A L+ + + V AA GF HLG+FA DY+ Sbjct: 260 TLQNGFRRAFGQSPMRVLRNARLDAAHYHLM-AQTDTPDVTTAAFSNGFSHLGRFARDYK 318 Query: 332 QLFSEKPSLTLH 343 F PS T Sbjct: 319 ARFGHSPSHTAR 330 >UniRef50_A0K0Q9 Transcriptional regulator, AraC family n=2 Tax=Arthrobacter RepID=A0K0Q9_ARTS2 Length = 319 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 113/293 (38%), Gaps = 25/293 (8%) Query: 59 PGKFHGEFTEILLDDIQVFREYTG-LALRQS--CLVWPNSFWFGIPATRGEQGFI----G 111 P F G +LD + + ++ ++ + P +F + G + Sbjct: 42 PDTFRGRMRSRVLDRLCIVEVSASGHSVHRTPALVARPGQRYFKLNLQLEGTGLLIQDNR 101 Query: 112 SQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSA 171 L ++A + L+ + ++ V+ D ++ +++ Sbjct: 102 EAVLRPGDLAIYDTNRPYTLAFEEQARVMVVMFPHDSLSLPPDYVGQ------------L 149 Query: 172 LEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAE 231 V+ L G V +A EN E L P+ ++ + L + + + ++ + + Sbjct: 150 SAVRLAGGHGLTGIVGPFIAQLAENLEALSGPSGSRLAANAL--DLVSTMLHSELDMARD 207 Query: 232 SISHQSYRRLLSRAREYVLENMSEP-VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLK 290 S+ Q L + REY+ N+++P ++ + +S R L N FH G +W++ Sbjct: 208 SMKPQVL--LATSVREYIEANLADPQLSPASIAAAHFISTRHLHNIFHE-TGTTVASWIR 264 Query: 291 RIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 RL +RR+L P +V A +WGF F+ ++ + E PS Sbjct: 265 SQRLERIRRDLRDPLLNGTSVGAVAARWGFLDAAHFSRTFRDAYGESPSDWRR 317 >UniRef50_Q5Z0F0 Putative transcriptional regulator n=1 Tax=Nocardia farcinica RepID=Q5Z0F0_NOCFA Length = 359 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 97/252 (38%), Gaps = 6/252 (2%) Query: 94 NSFWFGIPATRGEQGFIGSQCL--GSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITR 151 + + +P +GS+ + G ++ L + L + Sbjct: 99 DFYLIQVPVEGHAAITVGSRSFVSTPEVASVLEPGDRVSMAWEGANRQLLLRLDRATVHD 158 Query: 152 QANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGD 211 + ++ + ++ W + L + AV++ + Sbjct: 159 AVRKKLGREPAAPLVFDPRMDLTTPANRT--WRGLLTLLVDAIDRAAAPTSIAVQE--FE 214 Query: 212 NLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRR 271 LL++ + + + R ++RA E + + EP+TV D+ + + + R Sbjct: 215 GLLVSQLILGQPHNYRDELDRTPQPVVSRPIARAAELIEAHAHEPLTVDDIADAVGIGTR 274 Query: 272 TLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQ 331 TLQ+ F P A+L+ +RL VR +L+ TV D A++WGF H G+F+ Y+ Sbjct: 275 TLQDGFRRYYNTTPMAFLRDVRLRRVRTDLLQADPTLTTVTDIAIRWGFLHPGRFSVLYR 334 Query: 332 QLFSEKPSLTLH 343 F E PS TL Sbjct: 335 DRFGESPSRTLR 346 >UniRef50_Q47CB9 Transcriptional regulator, AraC family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47CB9_DECAR Length = 321 Score = 137 bits (344), Expect = 8e-31, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 102/262 (38%), Gaps = 22/262 (8%) Query: 99 GIPATRGEQGFIGSQC----------LGSAEIATRPGGTEFELSTPDDYTILGVVLSEDV 148 G+P Q + C L + + +L+ +D V + + Sbjct: 71 GLPDIYHVQFILRGHCRYELYRESLSLSAGHVLLINPEEPIDLTYSEDCEKFIVRIPSSL 130 Query: 149 ITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPEN-LHQPAVRK 207 + +A H+ + ++ L + Q L C+ E+ + P + + Sbjct: 131 FS-EACIEHSWFKPNECIKFNQV----PYKFEELDSLI-QLLGLLCQEAESSMATPQMLQ 184 Query: 208 VLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLH 267 + + ML+ +T S+ S+ RL+ Y+ N+ +T +L H Sbjct: 185 HYNRVVTGKLMTMLKHNVS-LTPPSLQSVSFDRLVK----YIENNIKRDITAEELAQYSH 239 Query: 268 VSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFA 327 +S R+L F P ++++ +L V LI+P S V A+++GF HLG+F+ Sbjct: 240 LSLRSLYLLFEKNAKTTPKNFIRQKKLEQVYSTLINPTSHVANVTAVALEYGFTHLGRFS 299 Query: 328 TDYQQLFSEKPSLTLHQRMREW 349 Y+ F PS T+ R ++ Sbjct: 300 ELYKSNFGVLPSETIRSRQKQI 321 >UniRef50_B3QH76 Transcriptional regulator, AraC family n=3 Tax=Rhodopseudomonas palustris RepID=B3QH76_RHOPT Length = 340 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 85/221 (38%), Gaps = 3/221 (1%) Query: 130 ELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQA 189 +L + L + + + V+ R L + + + A+ E Sbjct: 117 QLEFGQNSRQLLLRMPQRVLERAIAALVGF-KPRQPILFEPAICNDEPRYLGFRELTTLL 175 Query: 190 LATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYV 249 + + + + + + + ++ + + R + A YV Sbjct: 176 ASRLDSSYSVWPKNVLLHLEQSCITALLYCSRHNLGHLLENANAVNDDVPRYVRTAEHYV 235 Query: 250 LENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSM 309 + E +++ D+ VS TL AF G P+A++KR++LN +R L + Sbjct: 236 ESHRDEDISIEDVARIAGVSISTLTRAFLKHRGCSPSAYVKRVKLNHAKRLL--ETGAAT 293 Query: 310 TVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 T+ A++ GF + +F+ DY++ F E P+ TL + G Sbjct: 294 TLIGVALRCGFANPSRFSQDYREAFGESPTETLRRCRPNRG 334 >UniRef50_B7RQR5 Transcriptional regulator, AraC family n=1 Tax=Roseobacter sp. GAI101 RepID=B7RQR5_9RHOB Length = 341 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 48/213 (22%), Positives = 85/213 (39%), Gaps = 8/213 (3%) Query: 135 DDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFC 194 D L + + A L + +R ++ + L Sbjct: 129 ADCRKLLFQIDRTHLENVAQSLTGTP-LPGPVRFDMRVDFTSTNGRKLQRAFAAC--AMA 185 Query: 195 ENPENLHQP---AVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLE 251 +L QP A + +L++A+ + + + + + R + RA +Y+ Sbjct: 186 IERGSLFQPQYSATELRIETDLVVALLTLQNSNVSHIISRA-EGGAAPRDMRRALDYMHA 244 Query: 252 NMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTV 311 N+SEP+T+LD+ ++ RTLQ AF P L+ RL+A L+S + + V Sbjct: 245 NLSEPITILDIAKAAEMNVRTLQKAFQRSFAKTPMQVLRDARLDAAHY-LLSDRNDAPNV 303 Query: 312 KDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 + A GF HLG+F++ Y+ F P Q Sbjct: 304 SETAYSCGFSHLGRFSSYYRSRFGHSPRDVRAQ 336 >UniRef50_B4SLW6 Transcriptional regulator, AraC family n=3 Tax=Stenotrophomonas RepID=B4SLW6_STRM5 Length = 336 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 64/273 (23%), Positives = 106/273 (38%), Gaps = 20/273 (7%) Query: 85 LRQSCLVWPNSFWFG-IPATRGEQGFIGSQCLGSAE--IATRPGGTEFELSTPDDYTILG 141 R ++ P+ G I AT + L I G +EF LS P + L Sbjct: 74 CRGRFMLPPDWAMLGYIHATDETLSWCHGVPLTPGMALIVMPEGISEFTLS-PGTHMTLM 132 Query: 142 VV----LSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENP 197 +V + + + L + S H L + Q +A + Sbjct: 133 LVPVARVQRKLTELSLRSTPPAGQALSLFNLASDSAPLAGHYQQLHQQLGQGIALQPDET 192 Query: 198 ENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPV 257 E L V+ +LG G S + +++ + RA ++ N+ + Sbjct: 193 ERLLHGHVQALLGAGAADRPGC------------SRARRTHYLIAQRAENFMRLNLRRNI 240 Query: 258 TVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQ 317 + ++C+ VS R L+ AF + G PN +L +RL A R L S +VK A+ Sbjct: 241 YMNEICDAAGVSERGLRYAFEDLFGTSPNRYLSMLRLCAACRSLSMADSSRRSVKAIALS 300 Query: 318 WGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 G W L +FA +Y+++F E P TL + + G Sbjct: 301 CGLWDLSRFADNYRKVFGELPRDTLMRAPAQIG 333 >UniRef50_B9QYF5 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QYF5_9RHOB Length = 301 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 94/257 (36%), Gaps = 10/257 (3%) Query: 93 PNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQ 152 P+ P + + + + + G F +S+ + + L + Sbjct: 47 PDWITIIYPLSWAREYLLNGHECETGHLYLFQGPNGF-ISSARQRDSITIGLRRQRLIAT 105 Query: 153 ANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPE----NLHQPAVRKV 208 L D L + + AA+ F +Q+L P+ Q + Sbjct: 106 CASLLGVDTEDIALDDAVV-----KLPAAIDQFFRQSLCKVLSTPDYTTRQYGQVTMPAA 160 Query: 209 LGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHV 268 L +L + +L + +S + L E++ N ++ DLC + Sbjct: 161 LEADLYAMIAGVLAPCVFPELKGRMGQRSSLKSLRCVSEFIDLNGCANLSTADLCRVAKL 220 Query: 269 SRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFAT 328 L F +LG P +L+ RL+ RR L+ + ++KD A+ G+ G+FA Sbjct: 221 EYSRLHAVFDEVLGTSPYKYLQSARLSEARRLLLDDRNPPKSIKDVALSLGYMKSGRFAE 280 Query: 329 DYQQLFSEKPSLTLHQR 345 Y+ +F E PS T+ + Sbjct: 281 QYRDMFDELPSETMARA 297 >UniRef50_A0NVQ0 Transcriptional regulator, AraC family protein n=2 Tax=Labrenzia RepID=A0NVQ0_9RHOB Length = 332 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 97/259 (37%), Gaps = 11/259 (4%) Query: 93 PNSFWFGIPATRGEQGFIGSQCL--GSAEIATRPGGTEFELSTPDDYTILGVVLSEDVIT 150 + + +P + + G + + A + + + + + + Sbjct: 78 SDFYLIQVPISGAAEVRNGCRSMLSTPAAASILNPDRHTAMRWHAGCEQILLQIETGFLQ 137 Query: 151 RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLG 210 A + + +R + + + AA ++ L E H + Sbjct: 138 EVATRMAGVT--VGQVRFEPEFNLLSRDGAAWARRLRGVLGAV-EEGRVFHGTGSPE--Q 192 Query: 211 DNLLMAMGAMLEEAQPMVTAESISHQ---SYRRLLSRAREYVLENMSEPVTVLDLCNQLH 267 +L A+ L E QP + + Q +L RA + + E ++ +++LD+ Sbjct: 193 RHLEEALVGTLLEFQPNTVSPLLERQETGKSPAILKRAVKLIGERFADDISLLDISTHAQ 252 Query: 268 VSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFA 327 S R LQ F G P +L+ +RL+ R L+S +S+ V + A + G HLG+F+ Sbjct: 253 TSPRNLQLQFRQEFGCSPLQYLQNVRLSYARHLLLS-EGRSLPVAEVAYRSGHRHLGRFS 311 Query: 328 TDYQQLFSEKPSLTLHQRM 346 Y++ F E P T Sbjct: 312 VAYRERFGETPGATGRAHR 330 >UniRef50_B8H6K6 Transcriptional regulator, AraC family n=2 Tax=Actinomycetales RepID=B8H6K6_ARTCA Length = 321 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 107/295 (36%), Gaps = 27/295 (9%) Query: 58 HPGKFHGEFTEILLDDIQVFREYTGL--------ALRQSCLVWPNSFWFGIPATRGEQGF 109 G FHG+ +LD + + E T AL + T Sbjct: 43 DAGNFHGQLRSRVLDRMSIV-EVTATSHEVHRTPALIARAHERYFKLNLQLEGTGLLIQD 101 Query: 110 IGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQ 169 L ++A + L+ D I+ V+ D +T +++ Sbjct: 102 NREAVLRPGDLAIYDTSRPYTLAFEDTTRIMVVMFPCDTLTLPTDYVGQLA--------- 152 Query: 170 SALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVT 229 V+ + L G V Q + N + L+ P+ ++ + L + + + A+ ++ Sbjct: 153 ---AVRMAGDSGLSGIVGQFIRQLSGNLDVLNGPSGSRLAANAL--DLVSTMLHAEMDIS 207 Query: 230 AESISHQSYRRLLSRAREYVLENMSEPV-TVLDLCNQLHVSRRTLQNAFHAILGIGPNAW 288 + + Q+ L REY+ N+S+P+ + + +S R L N FH G W Sbjct: 208 PDRMKPQAL--LAVAVREYIDANLSDPLLSPASIAAAHFISTRHLHNVFHES-GTTVAGW 264 Query: 289 LKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 ++ RL R+L P + V A +WGF F+ ++ F PS Sbjct: 265 IRTQRLEGAGRDLRDPLHAGLPVGAVAARWGFLDAAHFSRTFRDAFGVPPSDWRR 319 >UniRef50_Q0RUS5 Possible transcriptional regulator, AraC family n=2 Tax=Rhodococcus RepID=Q0RUS5_RHOSR Length = 352 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 101/260 (38%), Gaps = 8/260 (3%) Query: 94 NSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTP---DDYTILGVVLSEDVIT 150 ++ +P GSQ + + P D T + + + + Sbjct: 94 GTYHVNVPLEGSVVSVCGSQQMTATPQHAAVFSPNEHTILPRWDADATQICIKIDRAGLQ 153 Query: 151 RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLG 210 + L + +R AL++ A W + L + ++P + P + + Sbjct: 154 GELAQLLGRP-IDQRIRFDLALDLTTPAGAR-WLSLLNLLLSTLDDPGLVPTPGLAAHVN 211 Query: 211 DNLLMAMGAMLEEAQPMVTAESISHQSYR--RLLSRAREYVLENMSEPVTVLDLCNQLHV 268 + +L ++AE + Q R + + + T+ DL + Sbjct: 212 YLERALIAGLLVHHTHSMSAELNAPQPVRSPHAVQKVLDQFESVPGAQYTIGDLAAIAGI 271 Query: 269 SRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFAT 328 R LQ F G+ P+ +L+ +RL+ VR +L+ ++ TV A +WGF HLG+FA Sbjct: 272 GARQLQKLFQDQFGMPPSVYLRHLRLDGVRHDLL-LGDENTTVGHTAFKWGFNHLGRFAN 330 Query: 329 DYQQLFSEKPSLTLHQRMRE 348 Y+ F E PS TL +R+ Sbjct: 331 SYEDKFGESPSHTLRAAIRK 350 >UniRef50_Q07S24 Transcriptional regulator, AraC family n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07S24_RHOP5 Length = 414 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 7/138 (5%) Query: 212 NLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRR 271 L A E +P + + S + ++YV N ++P++V DL V+ R Sbjct: 251 GLAAACMDFTEANRPPDASPTAS------TVECVKQYVELNWNQPLSVSDLARAADVNAR 304 Query: 272 TLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQ 331 TL F G P ++KR+RL+ R L +S TV A++ F + G FA DY+ Sbjct: 305 TLFKRFKQGCGYTPQEYIKRVRLHHAREMLQRAD-RSTTVLGIALKCSFQNQGHFARDYR 363 Query: 332 QLFSEKPSLTLHQRMREW 349 F E+PS TL + R Sbjct: 364 LAFGERPSDTLERARRRA 381 >UniRef50_UPI0001AF7528 hypothetical protein MkanA1_24775 n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF7528 Length = 350 Score = 135 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 93/253 (36%), Gaps = 8/253 (3%) Query: 93 PNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQ 152 + F P + + G L + V + D++ + Sbjct: 101 SDRFVVIQPRSGSLIAVGNGSADTDTPMLAVDGF--PRLLRLNSVRFTVVSIDADLLQQV 158 Query: 153 ANFLHNP-DRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGD 211 H P + + L ++ V A +W + T + + P + Sbjct: 159 GAGSHTPMPQQVEFLSSRPRTPVA----ARMWRDAFDYVTTSFASADTARHPLLVTAAAR 214 Query: 212 NLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRR 271 L A+ T+ + S + L A ++ + + + V D+ +H++ R Sbjct: 215 LLAAALLECFPSNVTAGTSSP-NDPSVPKALQTAMSFIHRHAAMNIGVKDVAAVVHLTPR 273 Query: 272 TLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQ 331 +Q F L P +L+RIRL+ ++LIS TV + A +WGF H G+FA Y+ Sbjct: 274 AVQYLFRQQLDTTPTEYLRRIRLHRAHQDLISGDRSITTVSEIAQRWGFAHTGRFAVLYR 333 Query: 332 QLFSEKPSLTLHQ 344 Q + E P L + Sbjct: 334 QAYGESPHTALKR 346 >UniRef50_A1ULB3 Transcriptional regulator, AraC family n=3 Tax=Mycobacterium RepID=A1ULB3_MYCSK Length = 348 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 59/245 (24%), Positives = 98/245 (40%), Gaps = 14/245 (5%) Query: 107 QGFIGSQCLG------SAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPD 160 +G I +C G + E+A + +D + V+L ++ A + P+ Sbjct: 109 RGRIAGRCAGIGGLARAGEVALMAQPDLPHDAEAEDVALTTVLLDPALVASLATGV--PE 166 Query: 161 RVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAM 220 +R V + + V + E L P V LG + Sbjct: 167 AEASPIRFSLFQPVDDSARQLWQQTVHYVKECVLAD-EALATPLV---LGHAARLLAAVT 222 Query: 221 LEEAQPMVTAESISHQSYRR--LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFH 278 L T S +H + LL RA ++ EN++ + + D+ +HVS R +Q F Sbjct: 223 LAAFPSASTVASTAHDRDAKPVLLQRAIGFIEENLANDIALADIAAAVHVSPRAVQYMFR 282 Query: 279 AILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKP 338 L P +L+R RL+ +L++ TV A QWGF H G+FA Y++ + + P Sbjct: 283 RHLETTPLQYLRRSRLHHAHMDLLAADPARETVTRIAAQWGFAHTGRFAVMYREAYGQSP 342 Query: 339 SLTLH 343 TL Sbjct: 343 HTTLR 347 >UniRef50_Q1Q9Q6 Transcriptional regulator, AraC family n=2 Tax=Gammaproteobacteria RepID=Q1Q9Q6_PSYCK Length = 284 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 93/250 (37%), Gaps = 15/250 (6%) Query: 97 WFGIPATRGEQGFIGSQC--LGSAEIATRPGGTEFELST-PDDYTILGVVLSEDVITRQA 153 I + ++G C ++ + P + +VLS + Sbjct: 45 SICIVLQGEREIYLGKDCQKFDNSSLMFCPVDIPLSMHIKHASSDHPVIVLSMKLNLVMI 104 Query: 154 NFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNL 213 + + R +VKE + W + F L P L + Sbjct: 105 QEV--------LARIPPQQQVKEGYLGIKWQLDDAIMQAFERLVNLLDCPNDTGFLSSLI 156 Query: 214 LMAMGAMLEEAQPMVTAESIS-HQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRT 272 + L AQ + + S+ +++A +++ ++ EPV + DL ++ +S Sbjct: 157 QQEIYYRLLSAQQGNKLRQLVINGSHTHRIAQATDWLKAHLDEPVVIGDLASRCGMSISG 216 Query: 273 LQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQ 332 F I + P + K++RL RR +I+ SQ + AMQ G+ QF+ +Y++ Sbjct: 217 FHQHFKEITQLSPLQYQKKLRLMEARRLIITNDSQ---ISQIAMQVGYESPSQFSREYKR 273 Query: 333 LFSEKPSLTL 342 LF P+ L Sbjct: 274 LFGNSPNSDL 283 >UniRef50_Q2T8G3 Transcriptional regulator, AraC family n=15 Tax=Burkholderia RepID=Q2T8G3_BURTA Length = 355 Score = 133 bits (336), Expect = 6e-30, Method: Composition-based stats. Identities = 51/190 (26%), Positives = 80/190 (42%), Gaps = 5/190 (2%) Query: 155 FLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLL 214 L D + R + G V+ L C A R +LG +L Sbjct: 133 ELKLADLLQATPRAPLLFALSVDAAHRGAGVVRDMLGQLCRWCAPPDTAAARSMLGPDLT 192 Query: 215 MAMGAMLEEAQPMVTAESISHQSYRRL---LSRAREYVLENMSEPVTVLDLCNQLHVSRR 271 + ML P +++++ R L + RAR++V ++ EP+ ++ L VS R Sbjct: 193 QWLMTMLLTRLPHSYSDALARGVRRPLPVHVRRARDHVDAHLGEPLPLVTLARAAGVSPR 252 Query: 272 TLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQ 331 TLQN F L P A+++ RL+AV L++ + V D ++ G G FA Y Sbjct: 253 TLQNGFARFLQTSPAAYVRERRLSAVHDALLNAPGRG--VADVLIEHGVHSFGHFAKAYA 310 Query: 332 QLFSEKPSLT 341 + F PS T Sbjct: 311 RRFGHPPSAT 320 >UniRef50_UPI0001B53BB4 transcriptional regulator, AraC family protein n=1 Tax=Streptomyces sp. C RepID=UPI0001B53BB4 Length = 320 Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 43/201 (21%), Positives = 72/201 (35%), Gaps = 3/201 (1%) Query: 138 TILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENP 197 + V + ++ A DR LR V V + P Sbjct: 122 ELRAVTVPLALVEEVAGR--PADRPARPLRFTRFTPVSTAMAEQWKRTVDYVEESVSRLP 179 Query: 198 ENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPV 257 +P V L + A T + + + + RA ++ P+ Sbjct: 180 AG-GEPLVADAAARMLAATVVAAFPTDARPDTVLADTRDATPETVRRAVAFIESQPDAPI 238 Query: 258 TVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQ 317 + ++ V+ R LQ AF LG P A+L+R+RL +L++ TV A + Sbjct: 239 GLAEIAAAAAVTPRALQYAFRRHLGTTPTAYLRRVRLALAHADLVAADPARDTVTAIANR 298 Query: 318 WGFWHLGQFATDYQQLFSEKP 338 WGF H G+F+ Y+ + P Sbjct: 299 WGFHHQGRFSAAYRAAYGGPP 319 >UniRef50_A5INH3 Transcriptional regulator, AraC family n=5 Tax=Thermotogaceae RepID=A5INH3_THEP1 Length = 299 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 70/174 (40%), Gaps = 5/174 (2%) Query: 173 EVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAES 232 + +L Q L F + L +P L + + L ++ Sbjct: 122 PIASSRGTSLGKVTYQLLDAFKRMLDLLDEPEHISALLPVIKKEIIYRLLVSEQGSKLIQ 181 Query: 233 ISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRI 292 I+ +++ A Y+ E+ SEPV + L + +S T F + G+ P + K++ Sbjct: 182 IALSGKNDVIA-ALNYLKEHFSEPVNMKKLAEMVGMSVSTFYQNFKTLTGMTPLQYQKKL 240 Query: 293 RLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 RL R+ L++ V AA Q G+ L QF+ +Y++ F PS + Sbjct: 241 RLCEARKLLMAGHD----VTTAAYQVGYESLSQFSREYKRFFGVSPSQDAKRLR 290 >UniRef50_C3UVB3 Putative AraC family transcriptional regulator n=1 Tax=Burkholderia sp. JS667 RepID=C3UVB3_9BURK Length = 323 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 74/341 (21%), Positives = 118/341 (34%), Gaps = 33/341 (9%) Query: 19 ENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHP----GKFHGEFTEILLDDI 74 E LKL P + + DV E I+ Q + L P G F + LD I Sbjct: 3 EVLKLNPTPVLRTHRLFDSADVDETRERISGIMQPHR-LTPAWQAGPFRAHMDFVRLDRI 61 Query: 75 QVF------REYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTE 128 E +L L F + G + G Sbjct: 62 GFGTIGFGAMEVETQSLADYHL-----LIFCLRGRAQAVLPRGEVAIEQTRGVALNPGDR 116 Query: 129 FELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQ 188 + +D V + ++ R +SA++V + VQ Sbjct: 117 LLVRFSEDSEQFVVRIDRRLL----------HPGKGGYRLRSAIDVGRPEMGPFFRQVQS 166 Query: 189 ALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREY 248 LA P + L+ ++L Q V + + S + A Y Sbjct: 167 LLADPDMVALARSDPRLALDCERFLV----SLLTRGQGDVASRAPS--LAPGAVRLAESY 220 Query: 249 VLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQS 308 + ++ E +T+ D+ + V RTLQ +F G P L+ RL+AVR+ ++S + Sbjct: 221 IEAHLHESITLDDIAKSVGVPVRTLQESFRRFRGSSPTQALREFRLDAVRKGILSGEGER 280 Query: 309 MTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREW 349 + AM GF HLG+FA + F E+PS T R + + Sbjct: 281 G-ISMVAMDCGFNHLGRFAAASRARFLERPSETAACRPKNF 320 >UniRef50_Q07S23 Transcriptional regulator, AraC family n=2 Tax=Rhodopseudomonas palustris RepID=Q07S23_RHOP5 Length = 411 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 1/113 (0%) Query: 235 HQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRL 294 H + A+++V N +P+ + L V+ RTL F G P ++KR+RL Sbjct: 271 HTPSANSVRAAKQHVDLNWDQPLNITALAEAAGVNARTLFKHFKQDCGFTPQEYIKRVRL 330 Query: 295 NAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 N R L +S TV A++ F + G FA DY+ F E+PS TL + R Sbjct: 331 NHARAMLQMAD-KSTTVLGIALKCCFQNQGHFARDYRLAFGERPSETLERERR 382 >UniRef50_UPI0001746906 putative ethanolamine operon transcriptional regulator n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746906 Length = 339 Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 88/257 (34%), Gaps = 8/257 (3%) Query: 88 SCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSED 147 + G +I + +I +E D + +S + Sbjct: 65 RGEFSDDRLCIGFIRDHLSPCWINGTEVRIDQIVVFAEHSELAYRAERDTHWVATQVSRE 124 Query: 148 VITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRK 207 + + + L + E + A L + + + Sbjct: 125 YLQAMTLEMLGRELELPT-QGMKKYEPLPETMAQLRRVFDDFTMLLRRDEVAV------E 177 Query: 208 VLGDNLLMAMGAMLEEA-QPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQL 266 + L+ AM L A AE Q + + RA ++L N++ P + D + L Sbjct: 178 CYKEMLIFAMVGALASAPNRSSNAELARLQVALQTVKRAETFILSNLALPYSSRDFASVL 237 Query: 267 HVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQF 326 ++ R ++ F + G+ P W + LN R L ++ V D AM+ GF H G+F Sbjct: 238 SMTERNVELQFKKMFGMSPRRWRECFGLNMAYRRLTRARWKAGLVSDVAMECGFSHPGRF 297 Query: 327 ATDYQQLFSEKPSLTLH 343 + Y +LF E P T Sbjct: 298 SASYGKLFHELPHETGR 314 >UniRef50_Q3AUH0 Transcriptional regulator, AraC family n=4 Tax=Synechococcus RepID=Q3AUH0_SYNS9 Length = 321 Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 60/297 (20%), Positives = 105/297 (35%), Gaps = 17/297 (5%) Query: 56 QLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQG---FIGS 112 QL G G + L ++ T A+ S P IP + + Sbjct: 29 QLSEGPLKGRLQILNLGSFRLTLLETNQAMFLSGTRRPLPCTIAIPLSDPQSADPIRAQG 88 Query: 113 QCLGSAEIATRPGG-TEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSA 171 + + +F+L + + V++S++ + + D L + Sbjct: 89 VDMPWPGLMGYNHQLRDFDLRLAANTPLASVIISKEHLHERHQQRKAGDLPLERWERSNQ 148 Query: 172 LEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAE 231 LE+ E + L + L +N + H L D + A ++ P+ Sbjct: 149 LELCEPIRTQL----RTQLGDIVDNQSSRHMNKATDQLIDTIFQAFQSLNARTLPIA--- 201 Query: 232 SISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKR 291 Q+ + N S+ +T+ +L + L+ SR +L N G P + Sbjct: 202 --KRQTRHAAAIELLHWCSNNPSKNLTITELSDVLYQSRTSLFNGCQDHFGRTPTELQRC 259 Query: 292 IRLNAVRRELISPWSQSM----TVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 IRL+ VR+ L++P V A GF FA Y+Q ++E P TL Q Sbjct: 260 IRLDLVRQLLLNPKRSDALKLKGVGAIATHMGFTSRSHFARRYKQQYNELPQNTLSQ 316 >UniRef50_A4CW16 Transcriptional regulator, AraC family protein n=2 Tax=Synechococcus RepID=A4CW16_SYNPV Length = 339 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 62/319 (19%), Positives = 115/319 (36%), Gaps = 16/319 (5%) Query: 34 QRQTTDVYEHALTITAWQQIYD--QLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLV 91 E A + + Y+ QL G+ G FT + I + + L + Sbjct: 26 SASFGSASELAYYLKRLGKPYEAIQLSQGRLAGRFTCANFNSITILEISSNQCLLLNGDR 85 Query: 92 WPNSFWFGIPAT-RGEQGFIGSQCLGSAEIATRPGG-TEFELSTPDDYTILGVVLSEDVI 149 P+ F + ++ + + + I E + T + S + I Sbjct: 86 GPDFMSFCLESSGVADDHKTHTLAVPKYSINGFKSNLKESHFQLTANSTTYFAITSANRI 145 Query: 150 TRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVL 209 +++ ++ ++ L +QQ++ + N R+ + Sbjct: 146 NSILKHCK-AEQLKEKFLTCNSAQITPSQHNKLKTLLQQSINNTASSLSN------RQQI 198 Query: 210 GDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVS 269 G++++ L Q + + + L+ + + +E +T+ D+ QL S Sbjct: 199 GNSIISHFIDSLMSTQDINY-HPLELTQRQLLVKNFIQLGFDRGNEDLTLDDISKQLFCS 257 Query: 270 RRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQS----MTVKDAAMQWGFWHLGQ 325 RRTL +GP LK IRL V L + +++ V D A + F+ G Sbjct: 258 RRTLIQGTKDTFEMGPMELLKTIRLEQVNWMLRNKDARAEAALQNVSDIAKHFNFYSRGH 317 Query: 326 FATDYQQLFSEKPSLTLHQ 344 FA YQ LF E PS TL + Sbjct: 318 FARAYQNLFHENPSQTLQE 336 >UniRef50_D0T367 Transcriptional regulator n=2 Tax=Acinetobacter radioresistens RepID=D0T367_ACIRA Length = 330 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 47/229 (20%), Positives = 99/229 (43%), Gaps = 8/229 (3%) Query: 118 AEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQ 177 + + +FEL + + S+ + + + L + + ++ ++ ++ Sbjct: 104 DQASIVSPEDKFELIIDKNCIQTFISFSKTFVEKILSDLISQPVIQPLI-FENVMDSHNP 162 Query: 178 HKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISH-- 235 A W + + N + + + + + L +QP ++ I Sbjct: 163 KIKAWW----DLIDSIKNFTYNFTNASFFQEMRSDFEYIIVKSLLLSQPNNYSDLIYKNT 218 Query: 236 QSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLN 295 Y L+R E++ +N+ + + + DL +S++ L F L PNA+++ RL Sbjct: 219 LDYPDFLNRLLEFIQKNIQQKIEISDLEYASGLSKKKLNTIFKKYLKCSPNAYIRHYRLK 278 Query: 296 AVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 + E IS S + + + A +WG HLG+F+ +Y++ F EKPS TL + Sbjct: 279 CIYNE-ISQSSYKINITEIAYKWGVTHLGRFSIEYKEAFGEKPSETLKK 326 >UniRef50_A1K4I0 Putative AraC-family transcriptional regulator n=3 Tax=Proteobacteria RepID=A1K4I0_AZOSB Length = 346 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 52/238 (21%), Positives = 88/238 (36%), Gaps = 21/238 (8%) Query: 120 IATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHM-LRNQSALEVKEQH 178 + +PG + L P + +L V PD + + A ++ Sbjct: 117 LVWQPGCEQLLLKVP--FELL-----RQVSCHTCIRSRCPDDASDCGVGLEPAFVIERGF 169 Query: 179 KAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAE------- 231 VQQ L E P + + + A A + Sbjct: 170 NLQWRALVQQLLNLLPAPGEAGLHPGWLNQFEQTVALFLLAHQPAAVGRDLDDDAGPAEA 229 Query: 232 ----SISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNA 287 + S + R L +Y+ + P+++ DL VS RTL H G+ P Sbjct: 230 VIELTASSRLAERKLDAVEDYMRSRLFAPISLADLAKAAGVSARTLNILCHRYRGVAPMV 289 Query: 288 WLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 L+ +RL+A R L++ +V + A+++GF HLG+F+ Y++ F E P T R Sbjct: 290 LLRHVRLDAARARLLA--DPFASVTEVALEYGFGHLGRFSAYYRERFGELPRDTGAAR 345 >UniRef50_A7NK51 Transcriptional regulator, AraC family n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NK51_ROSCS Length = 311 Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 19/214 (8%) Query: 134 PDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATF 193 P +L V+ + ++ R N R+L +++ A+ V+ L V QA Sbjct: 113 PPGGALLAVLPATTLMARLGNVDALTGRILSVVQGCGAVCVQ-----LLSALVLQA---- 163 Query: 194 CENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENM 253 L R +LGD L A+ L Q T + R LL+ Y+ + Sbjct: 164 -----PLLSAGQRLILGDGALDAIIVWLRGEQ---TTDDHLSTRRRELLNAIYSYIDHRL 215 Query: 254 SE-PVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVK 312 + + + ++ VS R L F A GI W+ RL +R EL+ +++ Sbjct: 216 EDYQLCPRVIADRFGVSVRYLHMLF-AATGITVTRWITIRRLEVIRSELLRCGGDHGSIR 274 Query: 313 DAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 D A +WGF L +F+ ++Q F E PS+ + +R+ Sbjct: 275 DIATRWGFHDLSRFSRVFRQHFGEPPSVYVRRRV 308 >UniRef50_Q89FI3 Transcriptional regulatory protein n=3 Tax=Bradyrhizobium RepID=Q89FI3_BRAJA Length = 341 Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 46/217 (21%), Positives = 80/217 (36%), Gaps = 5/217 (2%) Query: 132 STPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALA 191 D + ++L ++ ++A L RV + +++ AL + + Sbjct: 127 MMWSDCAQVILLLDRRMVEQRAAALSG--RVAGTVEFDPVIDLDAPSGRALRTSLGGLMT 184 Query: 192 TFCE-NPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAE-SISHQSYRRLLSRAREYV 249 P P + LL + S + R L AR+ + Sbjct: 185 LAERLGPSGRLSPVATADWREALLDHLLNGQRHGLSDAIRTFSGQAERLPRALRVARDRL 244 Query: 250 LENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSM 309 +N EP+ + L + R LQ F G+ + L +RL + L + Sbjct: 245 ADNAGEPLDLAQLACAAGIGIRALQLGFRRHFGVSISEMLLDMRLAGLHARLAQARPDA- 303 Query: 310 TVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 ++ + A GF HLG+ A Y++ F E PS TL +RM Sbjct: 304 SITEIAFDLGFTHLGRMAGAYREKFGETPSATLRRRM 340 >UniRef50_B8KQ27 Transcriptional regulator, AraC family n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KQ27_9GAMM Length = 325 Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 59/324 (18%), Positives = 117/324 (36%), Gaps = 18/324 (5%) Query: 26 KVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHG-EFTEILLDDIQVFREYTGLA 84 ++D V + +H+ T+ Q + G+ + +T QV R + + Sbjct: 15 SSDLDEVREFVAIRAGDHSRTLQNKTQFNWSVEAGRTNTLGYTASTATGAQVIRATSSCS 74 Query: 85 LRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVL 144 S I + + + ++ P + LS + + L Sbjct: 75 TV--------SLHLPINHSSNYRIGCQTLATSPDQLLVLPPNHTYTLSNLGGTG-VSITL 125 Query: 145 SEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPA 204 D++ R+ + + P R H + + L L T ++ ++ + A Sbjct: 126 DADLLLREIDEI-WPGRRGHSGLVACEIRLSRSEVNKLLSIRNVLLGTVADSADSQRRVA 184 Query: 205 VRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCN 264 + + D A++ +A + R ++ ++ ++S+ + + L Sbjct: 185 AKTLEQDITAWLAAAIVRQAGVKPLSPR-----RRSRVTSLENWIDNHLSQTIDLEALTA 239 Query: 265 QLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLG 324 V L A A G+ P + RL + L S+ +V A GF HLG Sbjct: 240 VSGVGAHALAKATSAARGMSPMRLVLTRRLEMAHKLLR--ESREESVTAIAHSCGFNHLG 297 Query: 325 QFATDYQQLFSEKPSLTLHQRMRE 348 +FA +YQ + EKPS TL ++ R+ Sbjct: 298 RFANEYQAAYGEKPSQTLAKKSRK 321 >UniRef50_C1BBD9 Putative AraC family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1BBD9_RHOOB Length = 336 Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats. Identities = 54/238 (22%), Positives = 96/238 (40%), Gaps = 12/238 (5%) Query: 110 IGSQCLGSAEIATRPGGTEFELSTPDDYTI--------LGVVLSEDVITRQANFLHNPDR 161 +G+AE+ GGT + ++ I L + + ++ A+ R Sbjct: 94 CARHRVGAAEVEVGSGGTFLVDCSRIEHYIEFDQSDLQLNLTVPHRLVADAADRWFGY-R 152 Query: 162 VLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAML 221 L + + + ++A + A+ + +P+ + L + LL + A Sbjct: 153 PDDRLWQHKCV-IGDGQQSAWNALLAYAVRSIAADPDRIAHGRPGIHLQEMLLGHLLAEW 211 Query: 222 EEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAIL 281 A + S + RA Y+ E+ +E TV ++ + VS R L AF Sbjct: 212 AAAAGVALDGGRS-DVAPEYVGRAEHYMREHAAELPTVSEVAAAVGVSVRALSGAFRRYR 270 Query: 282 GIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 PN +L +RL + ELI+ + TV A +WG+ ++G FA Y+ F E PS Sbjct: 271 ETTPNRFLTEVRLQRIHDELIAATHEC-TVSSVAARWGYVNMGVFAAAYRGRFGENPS 327 >UniRef50_Q3AVD9 Transcriptional regulator, AraC family n=2 Tax=Synechococcus RepID=Q3AVD9_SYNS9 Length = 350 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 74/335 (22%), Positives = 127/335 (37%), Gaps = 34/335 (10%) Query: 24 TPKVEVDNVHQRQTTDVYEHALTITAWQQIYD----QLHPGKFHGEFTEILLDDIQVFRE 79 TPK V R +E A YD Q+ PG+ G F + + Sbjct: 12 TPKQCERAVRSRSFRTAWEFESCFAA--VGYDVKAVQITPGELRGNFEVYGSSTLPILSI 69 Query: 80 YTGLALRQSCLVWPNSFWFGIPATRG-EQGFIGSQCLGS---AEIATRPGGTEFELSTPD 135 T L G+ T + + L +TR + F++S P Sbjct: 70 RTNQGLVVEGSRSLEKTVIGLEQTENINLHRVRGESLNPCSIHGFSTRLKDSYFQMS-PG 128 Query: 136 DYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCE 195 +T + + ++ + + +H +++ L ++L+++ +H L +Q Sbjct: 129 AHTTMAIFKTQRL--QDLAQIHGEQKLVDCLDRHNSLQLQPEHFNQLKTLLQ-------- 178 Query: 196 NPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRR--LLSRAREYVLENM 253 P N ++ L + GA+LE P V S + + + L+ + LEN Sbjct: 179 -PNNHTNGVSQESLIE------GALLECFHPEVFLGSSNGEPTHQAQLMREMLLWGLENP 231 Query: 254 SEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQS----M 309 + + + DL + SR +L + G+GP +K IRL V L P + Sbjct: 232 NNAIKLDDLSATIFASRSSLVQNCRSTFGLGPMTLMKNIRLGQVHLALSHPEIRHNMGHH 291 Query: 310 TVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 TV+ + +GF FA DY+ F E PS TL + Sbjct: 292 TVRSISSHYGFQSRNHFARDYRLFFGESPSATLQR 326 >UniRef50_A9I2R8 AraC-type transcriptional regulator n=3 Tax=Burkholderiales RepID=A9I2R8_BORPD Length = 336 Score = 130 bits (326), Expect = 9e-29, Method: Composition-based stats. Identities = 51/294 (17%), Positives = 103/294 (35%), Gaps = 11/294 (3%) Query: 56 QLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQ-- 113 Q+ F E +L V R G + + + + + + Sbjct: 48 QIAGSSFDFEHRCAILPHFSVHRIRYGAPVLMDIPGLRDKYILQVLLSGRSDTIYKNSNV 107 Query: 114 CLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALE 173 + S + G F D L + + A + D ++ S L Sbjct: 108 VMESGMVTALNVGEPFTKVLSQDAEQLLFCFNACQVNAIAASTLS-DFAGNLRFFPSPLR 166 Query: 174 VKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESI 233 + + L+ + + L + + D ++ M L ++ Sbjct: 167 IDKAP--MLFDLINAVCTAIESHDPVLASSRTSERMADLMVDLMIRYLPAESGRRCLGAV 224 Query: 234 SHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIR 293 + +A ++ EN E +T+ ++ + V++R L F P A+L+ R Sbjct: 225 PF-----HVQKAEAFMRENFREAITLAEVASAAGVTKRCLCINFRRFRNTSPMAYLRLHR 279 Query: 294 LNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 L R+ L S +++ +V + A + HLG+F+ +Y+ F E PS T+ + R Sbjct: 280 LTQARKMLESTQARA-SVTEVAGECALHHLGRFSQEYRLEFGELPSQTIERVNR 332 >UniRef50_C4KBC2 Transcriptional regulator, AraC family n=1 Tax=Thauera sp. MZ1T RepID=C4KBC2_THASP Length = 323 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 90/236 (38%), Gaps = 10/236 (4%) Query: 115 LGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEV 174 L + + +L+ D+ V + ++ A H + ++ Sbjct: 97 LPAGHVLVLNPDEPVDLTYSDNCEKFIVRIPSAML-DDACTEHRWFKPNERIKFSP---- 151 Query: 175 KEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESIS 234 + Q + + E L P + + + + ML+ MV A + Sbjct: 152 EPQRFEDIDSLLLLLRLLCEEAESELATPQMLQHYCRVVTTKLMVMLKHNVSMV-APTRH 210 Query: 235 HQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRL 294 S+ RL++ Y+ N+ ++ DL + +S R+L F + P ++++ +L Sbjct: 211 APSFERLVN----YIERNIKLDLSAEDLAHYAGLSLRSLYLLFEKNVKTTPKNFVRQKKL 266 Query: 295 NAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 V L P V A+++GF HLG+F+ Y+ + PS ++ R + G Sbjct: 267 EKVHSILSDPGQACPNVTAVALEYGFSHLGRFSELYKSTYGVLPSQSIRCRQPQAG 322 >UniRef50_B2I1B8 AraC-type DNA-binding domain-containing protein n=5 Tax=Acinetobacter RepID=B2I1B8_ACIBC Length = 294 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 45/216 (20%), Positives = 96/216 (44%), Gaps = 12/216 (5%) Query: 128 EFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQ 187 E S Y + + L ++ + H P + ++ + A+ V + + Sbjct: 89 VLEASVEQPYLSIVLRLDPYLLAQIMLEAHIPFKDVNTEKKGMAVGVVNSELNDAFIRLI 148 Query: 188 QALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRARE 247 + L T + P + P + K + LLM+ + + +V A + H+ + +A E Sbjct: 149 KLLDTPQDIP--ILSPLIIKEIFYRLLMSPQG--DRLKRIVAAGTTGHR-----IVKAIE 199 Query: 248 YVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQ 307 ++ N ++P ++ +L + + +S + F I + P + KR+RL RR L++ + Sbjct: 200 WLKTNFAKPFSIEELASTMGMSASSFHQHFRDITSMSPLQYQKRMRLTEARRLLMT---E 256 Query: 308 SMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 + +MQ G+ L QF+ +Y++ F PS+ + Sbjct: 257 EYDISSTSMQVGYESLSQFSREYKRFFGVSPSVDIK 292 >UniRef50_D0I5P8 Transcriptional regulator AraC family n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I5P8_VIBHO Length = 293 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 76/202 (37%), Gaps = 13/202 (6%) Query: 140 LGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPE- 198 + + + ++ + + + ++ QS + + L + + Sbjct: 95 FSLNIDQQMVGQLMMEMTRWQKEMYSA-PQSGFTQSAPITPEISNIASRLLGLLNDEMDK 153 Query: 199 NLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVT 258 + P++ + L +L G L +S+ + ++ Y+ +N +T Sbjct: 154 EILAPSICRELYYAVLKGPGGGLLRN-------CVSNHTGANRIAPVVHYIEQNFERNLT 206 Query: 259 VLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQW 318 + ++ + +S TL + F + + P ++K +RL+ R L S V + Sbjct: 207 IEEIASVAGMSASTLHDHFKQVTTVSPMQYVKSLRLHKARSML----SVGYQVAEVCYGV 262 Query: 319 GFWHLGQFATDYQQLFSEKPSL 340 G+ QF+ ++++ F PS Sbjct: 263 GYSSPSQFSREFKRYFGVTPSE 284 >UniRef50_A6Q8V3 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q8V3_SULNB Length = 325 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 51/280 (18%), Positives = 106/280 (37%), Gaps = 24/280 (8%) Query: 61 KFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEI 120 F G + +D Q+ + + + + + + L + EI Sbjct: 46 PFKGTYNICQNEDFQIASAVYHDGMMYNGYAPTGAITLTLIIDKEGSLTANGKILNAGEI 105 Query: 121 ATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKA 180 FE++ + LS+D + +LH ++ + A Sbjct: 106 LVLDDSDAFEIAFSHPIRKGVISLSKDFVDMHFPYLH---------------QMLGRVYA 150 Query: 181 ALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRR 240 ++ + + EN E +R L + L E+ ++ Sbjct: 151 DRDDVLKDLILSLEENTE-FKSSEIRTKLIEVLKFLSLDTQEKITKKLS-------KKEA 202 Query: 241 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE 300 L+ R+Y+++ + + + DL + +S RTLQ F I G P + K ++LN R+ Sbjct: 203 LIFDVRDYIIKLSEDNIPIEDLAKKFGMSERTLQTGFKKIFGYTPKKFTKLLKLNLAHRD 262 Query: 301 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSL 340 ++ S T+ + AM++GF + G FA ++++++ PS Sbjct: 263 IVK-NDGSKTISEIAMKYGFGNFGLFAQEFKRIYGVLPSE 301 >UniRef50_Q38ZW3 Transcriptional regulator, AraC family n=2 Tax=Burkholderia cepacia complex RepID=Q38ZW3_BURS3 Length = 324 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 95/254 (37%), Gaps = 21/254 (8%) Query: 93 PNSFWFGIPATRGEQGFIGSQCL--GSAEIATRPGGTEFELSTPDDYTILGVVLSEDVIT 150 ++ + + F C+ G ++ + P D + + + DV Sbjct: 82 RDAVFICLMHAGQGYTFQDVDCMQHGPGDLVLYDTSMPYGHGFPADMAMTVLDVPRDVFE 141 Query: 151 RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLG 210 + + R +S +++ A W V+Q A PE R+ Sbjct: 142 AR----------VGPWRYRSLVKIDRDDGVASWA-VRQVYALLAAPPEPTSDARERRA-- 188 Query: 211 DNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENM-SEPVTVLDLCNQLHVS 269 A+ +++ + ++ +S LSRA+ ++ ++ + + + +++S Sbjct: 189 ----AAILDLVQSMLRLRDGDASPTKSTVHTLSRAKAFIDSHLADDDLDSQSVSRAINLS 244 Query: 270 RRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATD 329 R L F I G+ ++ RL R +L + +TV + A +WGF + F+ Sbjct: 245 PRQLARVF-EIEGMPLTRYILARRLERCRADLRDRSLKHLTVSEIAFRWGFNNSAHFSRS 303 Query: 330 YQQLFSEKPSLTLH 343 Y+ F E PS T Sbjct: 304 YRARFGETPSDTRA 317 >UniRef50_Q3JGA1 AraC family regulatory protein n=57 Tax=Bacteria RepID=Q3JGA1_BURP1 Length = 390 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 97/280 (34%), Gaps = 13/280 (4%) Query: 71 LDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFE 130 + + FR + C V +F F A ++ + Q + Sbjct: 116 IPALSFFR--CSSPVDLGCSVTRAAFVFA--AQGAKRVTVAGQAYEYDHQQCLVTSVDL- 170 Query: 131 LSTPDDYTILGVVLSEDVIT-RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQA 189 P + + + A + + +R V + + Sbjct: 171 ---PMLSQVTRASAGAPYLCVKIALDVQRIAELSAEMRMPPPEAVPTGEGIVVGALSEPL 227 Query: 190 LATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESIS-HQSYRRLLSRAREY 248 L PA +L + + L + I+ S ++RA E+ Sbjct: 228 FDAALRLVRLLDTPADIPILAPLIEKELLYRLLTSGLGARLRHIAVAGSQTYRIARAIEW 287 Query: 249 VLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQS 308 + + +EP+ V L Q+++S +L + F + + P + K++RL+ RR L+ Q Sbjct: 288 LRHHYTEPLRVETLAQQVNMSVSSLHHHFKHVTTLSPLQYQKQLRLHEARRLLL---GQH 344 Query: 309 MTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMRE 348 V A++ G+ QF+ +Y +LF P + QR R Sbjct: 345 GDVGSVALRVGYDSPSQFSREYSRLFGAPPLRDVVQRRRN 384 >UniRef50_A1WQJ9 Transcriptional regulator, AraC family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WQJ9_VEREI Length = 198 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 9/158 (5%) Query: 183 WGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSY---R 239 W + + +P L P VR AM L AQ M E S Q Sbjct: 42 WNALMRYFCEQLAHPSPLSMPKVRMTEE-----AMMRHLPCAQSMSVREHFSGQPAALAP 96 Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 R L RARE++ + + +++ D+ + VS R+L AF + + P L+ +RL+ +R Sbjct: 97 RHLRRAREFMEAGLQQEISLKDIADHCGVSIRSLSRAFQSCYALSPMQVLRTLRLDRIRA 156 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEK 337 EL S + +V + A+ WG HLG+FA Y+ F E Sbjct: 157 ELRRGASDA-SVSEVALHWGCSHLGRFAAAYRARFGEA 193 >UniRef50_B5IIP6 Putative transcriptional regulator n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IIP6_9CHRO Length = 354 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 53/217 (24%), Positives = 90/217 (41%), Gaps = 9/217 (4%) Query: 138 TILGVVLSEDVITRQANFLHNPDRVLH-----MLRNQSALEVKEQHKAALWGFVQQALAT 192 ++L L + + + A+ + + H + R + A L ++Q +A Sbjct: 131 SLLVFRLEPERLLQTASAMAGLGQSPHPWRALLQRPHDWPPATAANGAPLQALLRQEMAL 190 Query: 193 FCENPENLHQPAVRKVLGDNLLMAMGAMLE---EAQPMVTAESISHQSYRRLLSRAREYV 249 A R + D + M AML + + + H+ R +++ Sbjct: 191 ADRLAAYGDGLADRLQVDDRIYRLMAAMLLPEVREEGPLDRLTQKHRQGRDAFDELIDFI 250 Query: 250 LENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSM 309 N+SEP+++ L H SRRTLQ AF LG W++ RL+ R+ L P S Sbjct: 251 RLNLSEPLSLTMLEEHSHYSRRTLQYAFRERLGCTATQWIRSQRLDLARQHLQHP-SPGD 309 Query: 310 TVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 T+ A + G+ L F+ ++QQ F KPS L + Sbjct: 310 TIASIAARCGYRSLSLFSVEFQQRFHVKPSQLLREAR 346 >UniRef50_A5V473 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V473_SPHWW Length = 358 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 95/254 (37%), Gaps = 12/254 (4%) Query: 95 SFWFGIPATRGEQGFIGSQ--CLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQ 152 F F + T Q S + + D+T L + + + Sbjct: 98 HFVFVVALTGEAVVEFNQQSWAFRSGDSVLLSPSVRYNFQMGQDHTHLAIGIPCSRLIGS 157 Query: 153 ANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDN 212 V+ + A + A+L GF++ V ++ Sbjct: 158 GRPYEAVHNVV-----ERAADAPNGGAASLMGFIEYLCTELHRGSPIFGMQDVVAANENS 212 Query: 213 LLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRT 272 L + A L + + V ++ + RA +++ ++ + + + D+ V RT Sbjct: 213 FLAMIRAALFDREMPVRQAAV----LPVFVRRAEQFIARHLKDDIQLSDIVEAAGVPART 268 Query: 273 LQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQ 332 L + F +G P WL+ RL + R ++I+ + ++V A Q+ H G+FA Y++ Sbjct: 269 LYHGFERFMGHSPMRWLRLRRLESARADIIASDGE-ISVTALANQYWIGHGGRFANMYRE 327 Query: 333 LFSEKPSLTLHQRM 346 ++ E PS TL + Sbjct: 328 IYGEPPSATLGRAR 341 >UniRef50_A5GRM4 Putative transcriptional regulator n=1 Tax=Synechococcus sp. RCC307 RepID=A5GRM4_SYNR3 Length = 316 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 59/330 (17%), Positives = 118/330 (35%), Gaps = 27/330 (8%) Query: 27 VEVDNVHQRQTTDVYEHALTI--TAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLA 84 + + + + E + ++ QL G G F + + + R + L Sbjct: 4 RRLSGLVDHRFSSASELEALLASIGFEAQVLQLEGGVLQGRFQFLADQRVALLRLQSSLG 63 Query: 85 LRQSCLVWPNSFWFGIPATRGEQGFI-GSQCLGSAEIA---TRPGGTEFELSTPDDYTIL 140 + C G + Q + +A + F+ + D ++ Sbjct: 64 ISIGCARKAEMICCGFELEGKPDVVLAHGQPIAPHAVAGVSLALSYSFFQFRSGADV-VI 122 Query: 141 GVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENL 200 ++ +D+I + + + L +++ + L + +Q AL G ++ LA P + Sbjct: 123 ALLPKQDLIEQLE--ICGGQQCLRWMQSHNQLLLHQQAHQALVGLLRHWLADPGAIPSDP 180 Query: 201 HQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVL 260 VR L + A + +L+ + + + Sbjct: 181 TAAVVR--------------LLNDDTVHGAVPFRWVTRFQLVFDLIALGARGTIDGLDLD 226 Query: 261 DLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSM----TVKDAAM 316 L ++L SRR+L +LG+GP L+ RL V + L+ +S TV A Sbjct: 227 QLADRLSCSRRSLIQGCKELLGMGPKEVLRIQRLEQVHQALLRHDPKSAVAPQTVNAVAE 286 Query: 317 QWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 ++GF G FA Y++ F E P+ + +R Sbjct: 287 RFGFQSRGHFAAAYRRQFGELPAASFRKRA 316 >UniRef50_A5EPU2 Putative transcriptional regulatory protein with PAS sensor and HTH domains n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EPU2_BRASB Length = 378 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 3/119 (2%) Query: 228 VTAESISHQSY-RRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPN 286 VTA+ ++ S + R E++ N S+ +++ L + VS RT+ F G+ Sbjct: 245 VTADHLARDSDIPMPIRRILEHIESNWSQKISIEQLATRYGVSPRTVYQHFAKS-GMSLA 303 Query: 287 AWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 +K RL RR L + TV A++ GF + G FA +Y++++ E PS +L + Sbjct: 304 EKIKLTRLQHARRMLYDAKAGD-TVTSIALRCGFSNPGHFAREYRKIYGETPSESLRRA 361 >UniRef50_C8S415 Transcriptional regulator, AraC family n=1 Tax=Rhodobacter sp. SW2 RepID=C8S415_9RHOB Length = 327 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 94/239 (39%), Gaps = 5/239 (2%) Query: 113 QCLGSAEIATRPGGTEFELSTPD--DYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQS 170 + + + P + P + L +++ + + + + + + Sbjct: 91 RVTAGSAVLFAPNSRRTRVERPQVGSFQALVLMVQQARVVELLDIAARDGKPRVSVPDAL 150 Query: 171 ALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTA 230 A+ H L F+ +A F + P L +G L + + Sbjct: 151 AISGTNPHIRRLSAFLA-CVADFHGSKNLEISPRAVGAAQVLLEEMLGDFLADLHDGLGG 209 Query: 231 ESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLK 290 S + + + + +A E + E+ E +++ L +L V R+LQ AF + GP L Sbjct: 210 GSHNTSALAK-VRQAEEIMREHCDEHLSMAALAQELGVGLRSLQLAFQQVRAAGPRVVLN 268 Query: 291 RIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREW 349 R+RL+ R L+ ++ V A+ GF HL +FA Y++ + E PS TL + R Sbjct: 269 RMRLDRARARLLD-SAEDARVTTIALDCGFAHLSRFAQTYRETYGETPSETLAHQKRRA 326 >UniRef50_A1UF63 Transcriptional regulator, AraC family n=4 Tax=Mycobacterium RepID=A1UF63_MYCSK Length = 131 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 59/109 (54%), Gaps = 2/109 (1%) Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 L R+ ++ EN + + ++ +++ R +Q + LG+ P +L+R+RL+ R+L Sbjct: 17 LRRSVAFIHENADSDIGLAEIAAAANLTPRAVQYMYRRHLGVTPLEYLRRVRLDLAHRDL 76 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH--QRMRE 348 + TV A +WGF H G+F+ Y++++ PS TL ++ R+ Sbjct: 77 QAADPAVDTVNSIAGRWGFSHAGRFSVAYRRMYGTPPSATLRTTRQRRD 125 >UniRef50_A9U6Q0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6Q0_PHYPA Length = 263 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 64/157 (40%), Gaps = 4/157 (2%) Query: 189 ALATFCENPENLHQPAVRKVLGDNLLMAMG-AMLEEAQPMVTAESISHQSYRRLLSRARE 247 L L P L ++ + +L E + V + + S+ ++ E Sbjct: 100 LLDAVIRLVRLLDTPKDILALAPLIIKEIIYRLLTEKEGDVFKQIATSGSHFATIAEVVE 159 Query: 248 YVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQ 307 + N +P+ + +L ++S +L F + + P + K++RL RR LI+ Sbjct: 160 RIKTNFDKPLRINELAQIANMSTSSLYRHFKQVTAMTPVQYQKQLRLQEGRRLLIT---D 216 Query: 308 SMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 V D A G+ QF+ +Y +LF P+ + + Sbjct: 217 KYNVADVAFHVGYESPSQFSREYARLFGCPPTTDILR 253 >UniRef50_Q2SF73 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF73_HAHCH Length = 320 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 92/247 (37%), Gaps = 10/247 (4%) Query: 97 WFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVI-TRQANF 155 I G++G++G Q + P + I ++ R Sbjct: 72 AIVIVGQGGKRGYVGEQTYTYDAYNYL----VLSVPLPFECEIYEASPESPLLGLRILVD 127 Query: 156 LHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFC-ENPENLHQPAVRKVLGDNLL 214 + +L + + + + K+ + L C + L PA K+LG +L Sbjct: 128 TLALNDLLIDMGDPPSRTSGDIPKSIYSTPLNDTLIEACIRLVKVLSDPAEAKILGPQIL 187 Query: 215 MAMGAMLEEAQPMVTAESIS-HQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTL 273 + + T + + H S +++ + + + +P+ + + ++S TL Sbjct: 188 REIYYRVLCGDRGETLRAAANHNSRVAQIAKVLKMIHQQYDQPLDIDTMARAANMSHSTL 247 Query: 274 QNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQL 333 + F A+ P +LK IRL+ R L + AAM+ G+ QF+ ++++L Sbjct: 248 HHNFKAVTDCSPLQYLKSIRLHQARNLLAR---GGINASTAAMKVGYVSPSQFSREFKRL 304 Query: 334 FSEKPSL 340 F P Sbjct: 305 FGAPPRD 311 >UniRef50_A8KCK0 HTH AraC-type regulator n=1 Tax=[Polyangium] brachysporum RepID=A8KCK0_9BURK Length = 322 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 89/238 (37%), Gaps = 21/238 (8%) Query: 113 QCLGSAEIATRPGGTEFELST--PDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQS 170 + + E+ ST P + + + + L + Sbjct: 82 RVMLRDEVYCYDTSRFLVFSTDLPISAQVTDATFERPYLCFRLDLDPKEVSELVLQLGAP 141 Query: 171 ---------ALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAML 221 L + A L V+ L + PE++ PA+ + L+ + L Sbjct: 142 PATRNATSRGLFLSAATDAMLDAAVR--LLRLLDTPEDV--PALAPLATRELVYRL---L 194 Query: 222 EEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAIL 281 + Q A+ S ++RA ++ N +EP+ V +L +S +L + F + Sbjct: 195 KSEQGERLAQVARADSPGHRVTRAIAWLKANYAEPLKVDELARCCCMSTSSLHHHFRVLT 254 Query: 282 GIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 + P + K++RL RR ++ S+ + V AA G+ QF+ +Y +L+ PS Sbjct: 255 SMSPLQYQKQLRLQEARRLML---SEGIEVSKAAYTVGYESASQFSREYSRLYGIAPS 309 >UniRef50_Q8RL38 Putative uncharacterized protein n=2 Tax=Burkholderiales RepID=Q8RL38_DELAC Length = 343 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 62/321 (19%), Positives = 107/321 (33%), Gaps = 31/321 (9%) Query: 40 VYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFG 99 +E A W+ G ++ + +++F + G + V Sbjct: 36 AHELADHDLRWR-------RGAVDTGMYKVGVHALEMFMLHYGAEVEVRPRVPEGFALVH 88 Query: 100 IPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNP 159 + + + T G L+ ++ +L ++ +I + + L Sbjct: 89 LSLKGAID------IISDEQRITVSPGEVAYLAPRKNFRMLWQRGAQQLILKVPDTLLRS 142 Query: 160 --DRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNL-LMA 216 L S + + F+Q L E N+ Sbjct: 143 IVAEAGACLDLPSTMRLTPAAARQWHLFMQSLLNIGTAPNELRLDEGWVDHFEKNIAFFL 202 Query: 217 MGAMLEEAQPMVTAESISHQSYRRL-------------LSRAREYVLENMSEPVTVLDLC 263 + + +P + S R L Y+ ++ PV V+DL Sbjct: 203 LSQRPSQQRPRDGVATASPPVLIRSSSCTGGTSSALERLEAMERYIRRHLCAPVGVIDLA 262 Query: 264 NQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHL 323 VS RTL P L+ IRL+A R L+ +QS++V AA +GF HL Sbjct: 263 RAAGVSVRTLNIICREYRRETPMQVLRNIRLDAARSALL--LNQSVSVTQAAFDYGFGHL 320 Query: 324 GQFATDYQQLFSEKPSLTLHQ 344 G+F+ Y++ F E PSLT Q Sbjct: 321 GRFSAYYKERFGELPSLTSSQ 341 >UniRef50_A6B9E2 Transcriptional regulator, AraC family n=5 Tax=Gammaproteobacteria RepID=A6B9E2_VIBPA Length = 307 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 95/213 (44%), Gaps = 14/213 (6%) Query: 140 LGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPEN 199 LG+++ D+ + + Q + V E ++ L FV+ LA +N Sbjct: 107 LGLIMELDLTEISQLIVDGELAFIQSKEAQKGIAVGELSESLLDAFVR--LAELLNEGQN 164 Query: 200 LH--QPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPV 257 + P +++ + LLM+ +VTA S SHQ +++A +++ N +P+ Sbjct: 165 IKILAPIIKREIFYRLLMSEQGTRLH--QIVTAGSHSHQ-----IAKAIDWLKNNFVKPL 217 Query: 258 TVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQ 317 +V DL + +S+ + F ++ + P + K++RL+ RR +++ +M + Sbjct: 218 SVGDLASYTGMSKSSFYTHFRSMTSMTPLQFQKKLRLSEARRLMLTENLDAMAAT---FK 274 Query: 318 WGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 G+ QF+ +Y +LF PS + G Sbjct: 275 VGYESPSQFSREYSRLFGAPPSKDIKSLRENLG 307 >UniRef50_Q0SCS8 Transcriptional regulator, AraC family protein n=2 Tax=Rhodococcus RepID=Q0SCS8_RHOSR Length = 342 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 47/296 (15%), Positives = 100/296 (33%), Gaps = 29/296 (9%) Query: 58 HPGKFHGEFTEILLDDIQVFREYTGLALR------QSCLVWPNSFWFGIPATRGEQGFIG 111 PG+F G L +Q+ E G A+ P G+ + Sbjct: 37 GPGRFTGTLRTTALGGLQL-SEVGGHAVDVRRTRTSIKRSDPGLVKVGLQLSGSGVIVQD 95 Query: 112 SQ--CLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQ 169 + LG + A ++L D+++ ++ +++ + L Sbjct: 96 DREAVLGPGDFAVYDTSKPYDLHFAGDFSMFVLMFPRELLRIASRELG------------ 143 Query: 170 SALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVT 229 + + + + V L + P ++ D +L +GA ++ P Sbjct: 144 TVSARRIRGSTGMGALVSPFLTNLHHSVVTGTMPTTP-LVEDAVLDLLGAAVQSEAPADA 202 Query: 230 AESISHQSYRRLLSRAREYVLENMSEP-VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAW 288 + LL + ++ ++ +P + + HVS R LQ F A G W Sbjct: 203 TAPGAS-----LLLAVKSFIDAHLHDPTLDTAAVAAHHHVSTRHLQKMFEAD-GHTVAGW 256 Query: 289 LKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 ++ RL RR+L + ++ ++G + F+ +++ + P Q Sbjct: 257 IRHRRLEKCRRDLKDIRFRGDSIGTICARYGLVNSSHFSRLFKETYGVSPRAFREQ 312 >UniRef50_A5VE01 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VE01_SPHWW Length = 329 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 81/231 (35%), Gaps = 15/231 (6%) Query: 116 GSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVK 175 + ++ G ++ + + + +I A + + + Sbjct: 107 KAGDVVLFSGKARSIFEFSAEFEQMTLKIPTSIIDAVAGNHNFSAHLRPGVLRCDTNP-- 164 Query: 176 EQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISH 235 L ++ A+ + + VRK + + A +A A Sbjct: 165 ------LLQAIESIYASIGQPNDIYRSRVVRKEAERLIAAMVIAACGDAGQPAEASDFPP 218 Query: 236 QSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLN 295 L RA ++ N+ V++ DLC +S L F LG P +L RL Sbjct: 219 S-----LVRACAFIERNLGGEVSIEDLCRVASISASGLNYIFKRYLGFSPLRYLALCRLE 273 Query: 296 AVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 A ++ ++ + + A+ GF HL +F+ Y + F E PS T ++ + Sbjct: 274 AANEMILRYPARQ--ITEIALDCGFLHLSRFSGLYAKRFGELPSQTRNRAL 322 >UniRef50_C6RKI0 Transcriptional regulator, AraC family n=2 Tax=Acinetobacter radioresistens RepID=C6RKI0_ACIRA Length = 337 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 90/234 (38%), Gaps = 9/234 (3%) Query: 114 CLGSAEIATR-PGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSAL 172 + SA I T ++ + T + + LS + Q + +L + Sbjct: 101 IIQSAGIMTVSHPHSKNRIITSQHCRNIILKLSRQEVDTQLYKMLGHMVAEPLLFDCGIS 160 Query: 173 EVKEQHKAALWGFVQQALATFCENPENLHQ-PAVRKVLGDNLLMAMGAMLEEAQPMVTAE 231 E +A + + L C N+ + + G L+ + + + Sbjct: 161 CTTEGVEAII-----ETLNYLCHAHYNIQHWDTISESFGRYLIELILLKVPNNY-TAQLQ 214 Query: 232 SISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKR 291 +++AR+Y+ ++ + + +L Q VS RTLQ F+ P +++ Sbjct: 215 QRGKVILPGYMNKARQYIARHIRNNIVLAELGKQCGVSVRTLQKGFNQYFHQTPIDYIRD 274 Query: 292 IRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 +R+ + EL + TV D ++ G LG F+T Y++ + PS TL Q Sbjct: 275 LRIKLIHHELQHSQAHE-TVTDILLRNGINSLGHFSTLYKKRYGCLPSQTLRQA 327 >UniRef50_C3X9E6 Transcriptional regulator n=2 Tax=Proteobacteria RepID=C3X9E6_OXAFO Length = 304 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 55/291 (18%), Positives = 110/291 (37%), Gaps = 33/291 (11%) Query: 68 EILLDDIQVFREYTGLALRQSCLVWPNSF---WFGIPATRGEQGFIGSQCLGSAEIATRP 124 + ++ +FR + C N F G+ + +IGS+ E Sbjct: 31 QTPVNGFFLFR-------KNECECPENCFYEPAVGVIIQGQKHSYIGSREYRYGEGYCLV 83 Query: 125 GGTEFEL------STPDD-YTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQ 177 G + +TPD+ + +G+ L + + T+ A + P + + L + Sbjct: 84 NGIDLPAKNTILDATPDNPFLGMGIRLDKSLTTQLAAEIPPPPKTGN--EPDCGLSLTRT 141 Query: 178 HKAALWGFVQQALATFCENPE--NLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISH 235 L F + L E PE + P + + + LL+ + Sbjct: 142 DPDILDAFAR--LLDLLEKPEQIPVMAPMILREIHYRLLIGPQGSFLRTVNTFGTQGNQ- 198 Query: 236 QSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLN 295 +++A ++ N EPV V +L +++++ T F + + P + KR+RL Sbjct: 199 ------VAQAISWLRNNYKEPVQVDELAKKVNMATSTFHRHFKQLTSLSPLQFQKRLRLY 252 Query: 296 AVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 +R ++ + A M G+ QF +Y++LF E PS +++ Sbjct: 253 EAQRLMLVENEYAAN---ACMAVGYESPTQFNREYKRLFGEPPSRNINKVR 300 >UniRef50_Q89JG6 Blr5317 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89JG6_BRAJA Length = 320 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 101/291 (34%), Gaps = 17/291 (5%) Query: 62 FHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAE-- 119 F + L ++ + + + P + + + S+ + Sbjct: 41 FAAARAVVSLPACRIIVMRSFARILDTAYRMPGGMVI---LSMTDDLLVNSKGMDLDARF 97 Query: 120 IATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHK 179 G E P ++ S + R + + D + + N+ AL Sbjct: 98 FVALRGNDECHFVEPRTNYHAMIIFSPGLKDR--GWFDHADDLRAYVANRPAL------- 148 Query: 180 AALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYR 239 + L T P L + LL+A+ + + S+ Sbjct: 149 LHTRQLLLDILRTASVQPFLFETTEAAAHLQEGLLLALDDLFRIDARPERSTSVQGGRSA 208 Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 +L+ EYV + P+ DL + VS RTL A + G+ + +++ RL A R Sbjct: 209 KLVQWIDEYVAAYPTAPIYTADLAGEFGVSIRTLGGAVSKVRGMSLHQYIRLKRLWATRA 268 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 L+ TV A GF H+G+FA Y+ F E PS TL R R+ G Sbjct: 269 RLL--KGGGATVATCARAQGFHHMGEFAAAYRATFHEAPSDTLA-RGRQIG 316 >UniRef50_A2SM26 Transcriptional regulator, AraC family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SM26_METPP Length = 324 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 65/342 (19%), Positives = 126/342 (36%), Gaps = 41/342 (11%) Query: 17 LPENLKLTPKVEVDNVHQRQTTDVYEHA--LTITAWQQIYDQLHPGKFHGEFTEILLDDI 74 +P +L P +V TD +E A W Q+ D++ P +F+ + + Sbjct: 9 VPASLPEPPWWSTTDVALADRTDAWEAALSDNFRRW-QVPDRVAP-EFNARLRHRDVAGL 66 Query: 75 QVFR--------EYTGLALRQSCLVWPNSFWFGIPATRGEQGFI----GSQCLGSAEIAT 122 +V + Q + G+ TR + + +G ++ Sbjct: 67 RVVECICDPCGGRRLPRHVSQEGAAY-----IGVQITRSGRESLRAGDERVAVGPGDLVI 121 Query: 123 RPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAAL 182 E + + + ++L D + + + L+ + A L Sbjct: 122 WTSDQPMEFTVTERLHKVSLILPWDDVKERLPRTGR--------FRGTVLDSRSGIGAVL 173 Query: 183 WGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLL 242 + ++ LA+ E+ E AVR+ + L AM LE A ++ + L Sbjct: 174 YSHIES-LASQLEDLEAGELSAVRRATVELLTAAMSCRLEPAPRGLSLQQ---------L 223 Query: 243 SRAREYVLENM-SEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 R ++Y+L+++ E +T + H+S R L F G +A++++ RL L Sbjct: 224 KRVQDYILDHLQDETLTPGSIAQAHHISPRYLHLLFGK-TGQSVSAYIRQQRLERCGEAL 282 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 +P + +V + A QWGF F+ ++Q F P Sbjct: 283 SNPSYREHSVAEIAYQWGFTDPAHFSRVFKQHFGHPPGHCRR 324 >UniRef50_A5EE87 Putative transcriptional regulatory protein, AraC/XylS family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EE87_BRASB Length = 395 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 90/231 (38%), Gaps = 9/231 (3%) Query: 122 TRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAA 181 G + +L P Y L + + + + ++ + + + A Sbjct: 158 IVSGRSRLDLKFPAGYRQLVLRVETAPLQGLLRAIVGDGSDRDLVFEEDSPD------PA 211 Query: 182 LWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAES--ISHQSYR 239 + FV+Q + + + Q + + M +L + + + + R Sbjct: 212 VMAFVRQDVFKAADELQKFGQNYSPLAIAELERSLMTRLLLAHRHNFSDRLHIVPRRLNR 271 Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 ++ Y+ + +EP+ + + VS R++ F P + KR+RL Sbjct: 272 SIVDLVESYIEAHWNEPLDMEKIARITSVSARSIFREFSETGRGSPGQFAKRVRLRRASE 331 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 L P +++ +V A + GF +LG+FA+DY++ E PS TL + + G Sbjct: 332 LLGKPDART-SVVSVAFKCGFGNLGRFASDYRREMGELPSETLRKARQRLG 381 >UniRef50_UPI0001B566E3 AraC family transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B566E3 Length = 308 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 82/250 (32%), Gaps = 4/250 (1%) Query: 96 FWFGIPATRGEQGFIGSQCLGSA-EIATRP-GGTEFELSTPDDYTILGVVLSEDVITRQA 153 F IP G + S +AT P + D L V + + Sbjct: 60 FVVMIPLAGHALVRSGDNEIESHPGLATIPDPDQPLSMRWSADCVKLIVRIERSALEEFL 119 Query: 154 NFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNL 213 + ++V + A + + + +L Sbjct: 120 REHAGHLLDDGPVTFHPGMDVATGYGAGWADIARTMARDLDGTSSLFSDSFLARTWEQSL 179 Query: 214 LMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTL 273 ++ + + + SH + RR ++ A + + + EP T+ L L + +RTL Sbjct: 180 MLGLFRT-QSPSYDSRSPEPSHIASRRHVNAALAAIRQRVDEPWTIDSLAGDLGIGKRTL 238 Query: 274 QNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQL 333 Q AFH G L RL R L S+ V + G H G+ + Y+QL Sbjct: 239 QAAFHEA-GSTFTGELLEARLRKARSILRDAAPGSLKVTGVFARCGLHHHGRASGQYRQL 297 Query: 334 FSEKPSLTLH 343 F E P TL Sbjct: 298 FGESPKETLR 307 >UniRef50_C5CKL4 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CKL4_VARPS Length = 320 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 59/331 (17%), Positives = 119/331 (35%), Gaps = 36/331 (10%) Query: 37 TTDVYEHALTITAWQ----QIYDQLHP--------GKFHGEFTEILLD--DIQVFREYTG 82 +TD + W +Y QL G F G + L D+ V R Sbjct: 6 STDAVPRGQRLAYWTDMICNVYVQLGCDPVREGDSGNFEGSIRQHTLPSLDVSVVRSGPQ 65 Query: 83 LALRQSCLV-WPNSFWFGIPATRGEQGFIGSQ----CLGSAEIATRPGGTEFELSTPDDY 137 +R + F + QG + L + + A ++L D + Sbjct: 66 KVMRTPGHISRSGDDCFLVSIQARGQGVVRQDGRDAVLAAGDFALYDSTRPYQLLFDDSF 125 Query: 138 TILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENP 197 + + L + + + LH+ + + + + +E L G ++ L + Sbjct: 126 EQIVLKLPGERLR---SELHHTEAL-----TATTVSGREGAGHLLLGMIRT-LREDIDTL 176 Query: 198 ENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEP- 256 + AV + L+ + + P +++ + H L+R + + E +++P Sbjct: 177 QPASALAVANGVQSILVAGLQTLPAARSPGLSSLTAYH------LARVKRRIDEQLADPS 230 Query: 257 VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAM 316 ++V L QL VS + F + + P+ ++ RL A R+L+ V + A Sbjct: 231 LSVGSLAAQLGVSASHIHRVFKSEP-LTPSQYIWERRLEACSRDLLEARLAGRPVAEIAY 289 Query: 317 QWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 GF F+ +++ F P QR++ Sbjct: 290 GRGFNDAAHFSRAFRERFGCSPREWRQQRVQ 320 >UniRef50_C6BWP6 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWP6_DESAD Length = 302 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 106/279 (37%), Gaps = 21/279 (7%) Query: 75 QVFREYTGLALRQSC----LVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFE 130 E T + + + L++ F + + + G E P + Sbjct: 28 TFLEEVTLVRVSEHKPKSPLIYEQCFCIAVYGHKICHLSDATFTYGEDEFLVVPAIVPLD 87 Query: 131 LSTPDDYT--ILGVVL--SEDVITRQANFLHNPD-RVLHMLRNQSALEVKEQHKAALWGF 185 + D +L + + +VI F++ D + L + + S + + + Sbjct: 88 IEVVPDVDNPLLSITVPLDFEVIQDLVEFINKYDKQALEKISSSSGIYFEPLTNNVMEST 147 Query: 186 VQQA-LATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSR 244 ++ + + + +R++ L+ G +L A + +S L+++ Sbjct: 148 IRLLKVLKSRKEANIFGKQIIREIYYHILMGKHGHLL--------ASAAFGESDYALIAK 199 Query: 245 AREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISP 304 + ++ +N + + + L ++S R+ N F A+ + P +LKRIRL R+ ++ Sbjct: 200 SLRFLHDNYDKGIDIDHLAKSANMSVRSFYNHFKAVTALTPVQYLKRIRLEKARQFMVVQ 259 Query: 305 WSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 Q+ AA G+ QF+ ++++ F P + Sbjct: 260 GEQA---SSAAHMVGYESPSQFSREFKRHFGYTPREAVR 295 >UniRef50_Q89NR2 Bll3772 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89NR2_BRAJA Length = 362 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 63/275 (22%), Positives = 105/275 (38%), Gaps = 14/275 (5%) Query: 72 DDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFEL 131 D + V + L+ + G+ + + ++ I G E Sbjct: 93 DGLFVLQRTFARRLQANIGTDHG---VGLVIPLACHFTANGREIDNSMIGIVRGKVPTEA 149 Query: 132 STPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALA 191 T L + + D+ R D + + + A L + Sbjct: 150 VEHHANTYLMLRFNSDMRHR-----GWADYETGLEFT----RLDDDTMAGLRAAILDMFC 200 Query: 192 TFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLE 251 + A+ + + + LL + A L S +R+L++R E Sbjct: 201 LASRCNDPRQFEAIDRPIQERLLEGLDAALAPVDAQDRRRG-SFDKHRKLVARLDEAATL 259 Query: 252 NMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTV 311 + P+ DL N L VS RTLQ+A A+ G+ + L+ RL + R +L++ MTV Sbjct: 260 SGGIPLYSGDLANALGVSVRTLQSATQAVHGVSLHHHLRLKRLWSTRTQLLT-GGDGMTV 318 Query: 312 KDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 K AA+ GFWH+G+F+ Y+ F E PS TL Q Sbjct: 319 KAAALANGFWHMGEFSKLYRTTFGEMPSGTLAQAR 353 >UniRef50_C9YUR8 Putative transcriptional regulator n=1 Tax=Streptomyces scabiei 87.22 RepID=C9YUR8_STRSW Length = 299 Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 39/238 (16%), Positives = 82/238 (34%), Gaps = 18/238 (7%) Query: 104 RGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVL 163 G I L +I G P + ++S + + + L Sbjct: 67 APLAGRIPDVHLRPGDICFYDAGHPPSPDLPAHCRLKVFLVSREELGLEDGDL------- 119 Query: 164 HMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEE 223 + + + L + L+ + P V ++L N + + + Sbjct: 120 -----RRVVAAPVARTSRLGTLLSPFLSELADTVS--ADPPVAEMLARNAVNLLATL--A 170 Query: 224 AQPMVTAESISHQSYRRLLSRAREYVLENMSE-PVTVLDLCNQLHVSRRTLQNAFHAILG 282 + E+ + +++R ++ E++S+ ++ + H+S R L F G Sbjct: 171 TERSGQDEAQTPGVRSPMVARVVRFIDEHLSDADLSPEVIAGAHHISVRYLHKLFRDE-G 229 Query: 283 IGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSL 340 W++R RL RR+L+ T+ A +WGF F+ ++ + PS Sbjct: 230 TTVGRWIQRRRLEECRRDLVHGLRNRRTIASVAGRWGFLSATHFSRVFRAAYGMSPSE 287 >UniRef50_A6EWL3 Helix-turn-helix, AraC type:Arac protein, arabinose-binding/dimerization n=1 Tax=Marinobacter algicola DG893 RepID=A6EWL3_9ALTE Length = 341 Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 84/229 (36%), Gaps = 10/229 (4%) Query: 115 LGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEV 174 L + L D L + + E + + + + L V Sbjct: 99 LKKGDAIILNPHELIILDYSHDCEKLIINVPESEFQ--SAVIGDLGHIPKSGIRFKRLPV 156 Query: 175 KEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESIS 234 +L + +L V + ++ + + + + Sbjct: 157 SLFCFPSLVKLFESVFLEVENFDSDLF--CVFDPYKEIMVKKILRTFQGNFNIYEKSVNA 214 Query: 235 HQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRL 294 H + + +Y+ N+ +++ +LC VS R++ N F A P +++K +L Sbjct: 215 HPC----MEKITQYIDNNLKNDISLDELCFISKVSVRSIYNMFSASFSTTPRSYIKNRKL 270 Query: 295 NAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 VR EL+ ++ V + A +GF HLG+ + DY++LF E PS T Sbjct: 271 QKVREELL--GGRAKNVTEVAFDYGFMHLGRLSCDYKKLFGELPSETRR 317 >UniRef50_B8DKQ8 Transcriptional regulator, AraC family n=2 Tax=Desulfovibrio RepID=B8DKQ8_DESVM Length = 292 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 105/282 (37%), Gaps = 22/282 (7%) Query: 67 TEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAE----IAT 122 TE L + ++R T ++ ++ L++ + G + + + Sbjct: 18 TETGLPGVGLYR--TSGSIHRTPLLYQQGLIIL--GQGAKLVHFGGRVYQYDQDHYLALS 73 Query: 123 RPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVK---EQHK 179 P E E + +L +V+ D+ DR+ + Q + Sbjct: 74 VPIAAECEAVATPEKPLLSLVVDIDLGVLNQLIGQIEDRIDYRSLTQGCTHQGLFLAKAD 133 Query: 180 AALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYR 239 AA VQ+ L P +VLG L+ + + + +++ ++ Sbjct: 134 AAFRNTVQRLLLALSC-------PLEAQVLGPGLVRELLFRVLCGENAAALHALATKNTN 186 Query: 240 -RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVR 298 + +A + + N SEP V L +++S T AF + P +LKR+RLN R Sbjct: 187 MSRIEKALKQIHGNFSEPFNVDQLAGFVNMSPSTFHRAFKDVTAFSPIQYLKRVRLNKAR 246 Query: 299 RELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSL 340 L + +AA G+ + QF+ ++++ F PS Sbjct: 247 SLLR---EDGVRASEAARMVGYESVSQFSREFRRYFGISPSH 285 >UniRef50_Q1YY61 Hypothetical transcriptional regulator, AraC/XylS family protein n=2 Tax=Photobacterium profundum RepID=Q1YY61_PHOPR Length = 264 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 92/248 (37%), Gaps = 24/248 (9%) Query: 96 FWFGIPATRGEQGFIGS--QCLGSAEIATRPGGT--EFELSTPDDYTILGVVLSEDVITR 151 + G+ +Q F G ++ P + + Y + +S +T+ Sbjct: 34 YHLGLITQGQQQYFFNGAKHVAGPGQMVIMPPDEIHDGQPKESAGYRVKVFSISPGWLTQ 93 Query: 152 QANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGD 211 QA + D L QHK + F +Q L P ++ D Sbjct: 94 QAEAVSGKD-----------LFCFPQHKISDHQFFRQLTQLH----TQLDNPLASQLSKD 138 Query: 212 NLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRR 271 +L + + L VT +++ + L + R+Y + ++ + +++ DL +S Sbjct: 139 SLPIEYFSYLLTHYGKVTEHTVTKLGTKD-LRQLRDYFMAHLDQKISLNDLAILCDLSPS 197 Query: 272 TLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQ 331 L F GI P AWL R+RL L + ++ + A GF+ FA ++ Sbjct: 198 QLLRQFKKTTGITPYAWLARLRLEHAMALLRAGFNS----TEVAYHVGFYDQAHFANTFK 253 Query: 332 QLFSEKPS 339 Q F PS Sbjct: 254 QTFGIAPS 261 >UniRef50_Q46855 Uncharacterized HTH-type transcriptional regulator yqhC n=112 Tax=Bacteria RepID=YQHC_ECOLI Length = 318 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 88/242 (36%), Gaps = 9/242 (3%) Query: 109 FIGSQCLGS-AEIATRPGGTEFELST---PDDYTILGVV-LSEDVITRQANFLHNPDRVL 163 +G E R E+ L T P + + + + L + ++ Sbjct: 73 LFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLM 132 Query: 164 HMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEE 223 + ++ ++ L + + +P ++LG ++ + + Sbjct: 133 DIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLT 192 Query: 224 AQPMVTAESI-SHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILG 282 ++ S Q++ L+SR + + +E ++V L + ++S + F ++ Sbjct: 193 GPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTS 252 Query: 283 IGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 P +LK RL+ R +I M AAM+ G+ QF+ ++++ F P Sbjct: 253 TSPLQYLKNYRLHKARMMIIH---DGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 Query: 343 HQ 344 + Sbjct: 310 AR 311 >UniRef50_B1YXB0 Transcriptional regulator, AraC family n=2 Tax=Burkholderia ambifaria RepID=B1YXB0_BURA4 Length = 339 Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats. Identities = 62/325 (19%), Positives = 109/325 (33%), Gaps = 30/325 (9%) Query: 38 TDVYEH-----ALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREY-TGLALRQSCLV 91 TD ++H A W+Q F G+ ++ + +Q E + Sbjct: 25 TDAHDHVSMELAEHALRWKQGVP--DAALFKGQLNQLTVYALQYGAEVEVAPRPFDGFSL 82 Query: 92 WPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITR 151 S G + + A + L L V + + ++ Sbjct: 83 VHTSLAGGAEIECDGHVM----GVSAGRTAVLAPTSRIRLRWRSGTRQLIVKVPDSLMRA 138 Query: 152 QANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPEN-----LHQPAVR 206 + PD L L A+ W + Q+L ++ + Sbjct: 139 VGDR--PPDDAAPGLAPGFLL---PTALASQWDLIAQSLLNVLAVADDGSIRTEWRDHFE 193 Query: 207 KVLGDNLLMAMGAMLEEAQPMVTAESISHQSYR------RLLSRAREYVLENMSEPVTVL 260 + L LL+ AQ + + R + E++ + P+++ Sbjct: 194 RSLALFLLVHCPPSPAAAQANGAPSARGAPAESGSRGGIRQMDALHEFIHARLCAPISLE 253 Query: 261 DLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGF 320 DL VS R+L G P L+ IRL+A R +L++ Q+ ++ D A+ +GF Sbjct: 254 DLAKAAGVSLRSLNVLCRRYHGATPMELLRNIRLDAARAQLLT--DQTASITDTALTFGF 311 Query: 321 WHLGQFATDYQQLFSEKPSLTLHQR 345 HLG+F+ Y F E P T R Sbjct: 312 GHLGRFSAYYFARFKELPRDTQKAR 336 >UniRef50_C8P3F6 ARAC-type regulatory protein n=2 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P3F6_ERYRH Length = 395 Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 90/254 (35%), Gaps = 22/254 (8%) Query: 103 TRGEQGFIGSQCLGSAEIATRPGGTEFEL-------STPDDYTILGVVLSE--DVITRQA 153 + + + + T GT F L P + V+ +T Sbjct: 143 EGEAHNYWELTYVDAGVLTTEIEGTSFTLENQEMILYFPGQFHTQSVLGENACSYLTIMF 202 Query: 154 NFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNL 213 + P + H+ + + + F++Q+ E P + ++ L Sbjct: 203 DMNMLPQSIEHI--QNRVMSCGNELYTLMNHFIRQSTIL-----EQEQSPFAKDLMVSYL 255 Query: 214 LMAMGAMLEEAQP---MVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSR 270 M + + +P T+ I ++ Y+ N+ P++V D+CNQ +SR Sbjct: 256 QEIMILLFQYDEPSSSHNTSNPIQVNFENEMMDEIYTYIQANIHRPLSVEDICNQFAISR 315 Query: 271 RTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDY 330 LQ F+ + P ++ +L + ++ + D A++ GF + F+ + Sbjct: 316 SALQLLFNKYFDMPPKQYINEQKLERAKHLIL---EGKYPITDVALKLGFSSIHYFSRKF 372 Query: 331 QQLFSEKPSLTLHQ 344 +Q F PS + Sbjct: 373 KQHFGFAPSEYAQK 386 >UniRef50_Q07QE9 Transcriptional regulator, AraC family n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07QE9_RHOP5 Length = 345 Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 3/119 (2%) Query: 228 VTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPN- 286 T S + + + +YV N ++P+ + ++ +S R +Q F A G+ P Sbjct: 222 DTKSRQSAEQAPKAIRDILKYVETNWNKPLYLEEIARHHRISPRAIQRYF-ASRGMMPLT 280 Query: 287 AWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 +K++RL + L +P ++ +V A+Q GF + G F+ DY++ F E PS TL Sbjct: 281 RQIKQLRLRHAHQALSNPTPRT-SVTGVALQCGFQNPGHFSRDYREAFGELPSETLRNA 338 >UniRef50_Q08YF3 Transcriptional regulator, AraC family n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08YF3_STIAU Length = 336 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 110/287 (38%), Gaps = 23/287 (8%) Query: 71 LDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEF- 129 + + + R +G + Q ++ P F + A + G G+ G Sbjct: 60 VPGLTLMR-LSGPTVVQRGMLKP---SFCVVAQGEKIG-----QAGADTTIRYSAGQFLA 110 Query: 130 -ELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFV-- 186 ++ P +L + + A F P VL +L + ++V FV Sbjct: 111 SSINMPVAGQVLHASKARPYL--AAVFELCPADVLSVLADA-KIQVDATAPCCPATFVGT 167 Query: 187 --QQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRR-LLS 243 + L + +L + L + L + QS + Sbjct: 168 ADARLLDVVLRSVSSLDDEREARFFAPLLRRELIYRLVTGPSAFAVAQSALQSRPDDGVG 227 Query: 244 RAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELIS 303 RA E++ + ++P+ + +L +++S +L + F A + +GP + KR+RL RR L+S Sbjct: 228 RAVEWIKTHFAQPLVIDELAKHVNMSTSSLHHKFKATVMMGPLQYQKRLRLEEARRLLLS 287 Query: 304 PWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 + + AA G+ QF +Y++LF P + +RMR+ Sbjct: 288 GLADA---TRAAFDVGYESPSQFIREYRRLFGTSPMRDV-KRMRDGA 330 >UniRef50_A4XVM8 Transcriptional regulator, AraC family n=15 Tax=Proteobacteria RepID=A4XVM8_PSEMY Length = 315 Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 47/233 (20%), Positives = 90/233 (38%), Gaps = 14/233 (6%) Query: 118 AEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQ 177 A + G E S Y L + + +I+ +L + A + Q Sbjct: 90 ASVMLPVTGRVIEASPEAPYLSLALEIDPALIS----------SLLTEMPPIPAPDAASQ 139 Query: 178 HKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMG-AMLEEAQPMVTAESISHQ 236 L + L L P +L L + ML Q E + Sbjct: 140 RALFLDRLDPRLLDAVIRLLRLLETPRDIAMLAPLALREIFYRMLLSPQGHRLHEVVVAD 199 Query: 237 SYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNA 296 S + +SRA E++ +N +P+ + +L ++++S TL + F A+ P + K++RL Sbjct: 200 SQSQRISRAIEWLRKNFDQPLRIEELAREVNLSPSTLHHRFKAVTAFSPLQYQKQLRLQE 259 Query: 297 VRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREW 349 RR ++ ++ A+ + G+ QF+ +Y +LF P + + + Sbjct: 260 ARRLML---CDNLEAAAASYRVGYESPSQFSREYSRLFGAPPQRDIARLRQAA 309 >UniRef50_B8K6M7 Transcriptional regulator, AraC/XylS family n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8K6M7_VIBPA Length = 310 Score = 123 bits (309), Expect = 8e-27, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 84/204 (41%), Gaps = 11/204 (5%) Query: 135 DDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFC 194 + T + +V+S + + N +P + + N + + + C Sbjct: 111 NQLTKVNIVISPSWLKSRLNQNGSPSQFVQTHLNYLRQPINGDTLNLINRILS------C 164 Query: 195 ENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMS 254 E P L + L L+ M ++++++ A + QS R + R ++ ++ Sbjct: 165 EQPTELLGSLKLESLSLQLIQKMFTLVDQSESRHIASKEAPQSER--IKRILHFIETHLE 222 Query: 255 EPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDA 314 P+++ L + +S LQ F LG+ +++++ RL+ + L +TV +A Sbjct: 223 APMSLDVLAARFSMSTSNLQRVFKDELGVTVKSYIRQRRLHVAKTGL---ERGVLTVTEA 279 Query: 315 AMQWGFWHLGQFATDYQQLFSEKP 338 A + G+ H F +++ F P Sbjct: 280 AYEAGYNHPANFTNAFKKEFGVPP 303 >UniRef50_Q6FBB1 Putative transcriptional regulator (AraC family) n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FBB1_ACIAD Length = 218 Score = 123 bits (309), Expect = 8e-27, Method: Composition-based stats. Identities = 43/193 (22%), Positives = 81/193 (41%), Gaps = 6/193 (3%) Query: 161 RVLHMLRNQSALEVKEQHKAALWGFVQQALATFCEN--PENLHQPAVRKVLGDNLLMAMG 218 R N V+ H L Q+AL+ N L Q + + + + Sbjct: 27 RQHECSSNTKEYAVQTSHYYRLQIDTQRALSIIEANTSSTPLLQSPLDTTVEEQTQQEIS 86 Query: 219 AMLEEAQPMVTAESISHQ--SYRRLLSRAREYVLENMSE-PVTVLDLCNQLHVSRRTLQN 275 + + + + + + + A +Y+ N+ + P+ + ++ +VS RTL + Sbjct: 87 SYILSTWIKLEEDKLRQSMCITPKYIKLAEQYIRNNIRQSPLKIEEIAAYANVSIRTLSS 146 Query: 276 AFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFS 335 F I P+ +++ +RL VR EL++ ++ + A G+ +LG F Y+Q F Sbjct: 147 GFRKYRNISPSLFIRDLRLEMVREELLNAGG-GKSIAEIAYASGYLNLGTFIRLYKQKFR 205 Query: 336 EKPSLTLHQRMRE 348 E PS TL +E Sbjct: 206 ELPSTTLRCYFKE 218 >UniRef50_Q0KJU2 Positive transcriptional regulator for anthranilate dioxygenase genes n=1 Tax=Sphingomonas sp. KA1 RepID=Q0KJU2_9SPHN Length = 318 Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 99/289 (34%), Gaps = 31/289 (10%) Query: 78 REYTGLALRQSCLVW------PNSF-WFGIPATRGEQGFIGSQCLGSAE-------IATR 123 RE L+ L S + + + G + E I Sbjct: 22 REKISRVLQPHRLAPLNRGKHQGSMNYVSLGSIGIGTIRFGEMAIDLDEVEGYHLFIFCL 81 Query: 124 PGGTEFELS--TPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAA 181 G E + T D GV ++ R F H+ ++++ + ++ E + Sbjct: 82 SGKAELNIHRETMDASGTQGVYVAPGTPLR-GRFSHDCEQLVLRVDKRALTAANEGNLPH 140 Query: 182 LWGFVQ----------QALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAE 231 + L + + + + + N + ++L + Sbjct: 141 FRTRIDMKAPLSSPWASILNSLIGDDSAIGMVQGDERIARNYERLLLSLLLAGEQDGAPA 200 Query: 232 SISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKR 291 S + +A ++ E+ + P+T+ D+ V RTL + F P L+R Sbjct: 201 RAS--IAPAAVRKAEAFMREHFALPITLGDIATAAGVPARTLLDNFRKFRDESPMKALRR 258 Query: 292 IRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSL 340 R++ R L + +V DAA+ G HLG+F+ D+++ F PS Sbjct: 259 YRMDHARMLL--ETGECSSVTDAALASGVSHLGRFSRDFREQFGRLPSE 305 >UniRef50_A9B3B5 Transcriptional regulator, AraC family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B3B5_HERA2 Length = 312 Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 96/254 (37%), Gaps = 11/254 (4%) Query: 97 WFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFL 156 + A +Q +G Q + P I +E + + F Sbjct: 64 SICLVAQGAKQLVLGDQTYNYDTEHVLIVAVDL----PVAAQITQASAAEPYLCFKLEFD 119 Query: 157 HNPDRVLHMLRNQSALEVKEQHKA-ALWGFVQQALATFCENPENLHQPAVRKVLGDNLLM 215 L + + Q +A + +Q + + L QP ++L ++ Sbjct: 120 PQRVAELALKVYSQGVPAPTQLRAISTERTNRQLVQAASRLLDLLSQPDEVELLAPLVID 179 Query: 216 AMGAMLEEAQPMVTAESISHQSYRRL--LSRAREYVLENMSEPVTVLDLCNQLHVSRRTL 273 M L P + Q+ R+ +++A ++ + ++P+ V +L ++S Sbjct: 180 EMIIRLLR-SPFGGRLAQIGQTTSRVTPVAQAIGWLRRHFAQPLRVEELATLANMSVSAF 238 Query: 274 QNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQL 333 F A+ + P + K +RL+ RR L+ + ++ + + Q G+ L QF+ +Y++ Sbjct: 239 HLHFKAVTALSPIQFQKTLRLHEARRLLV---ATALEIGSISQQVGYASLSQFSREYRRY 295 Query: 334 FSEKPSLTLHQRMR 347 F P+ L + R Sbjct: 296 FGCSPTEDLARLRR 309 >UniRef50_Q880S7 Transcriptional regulator, AraC family n=2 Tax=Pseudomonas syringae pv. tomato RepID=Q880S7_PSESM Length = 313 Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 6/180 (3%) Query: 173 EVKEQHKAALWGFVQ-QALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAE 231 E + + G + L F QP ++ D + + L + Sbjct: 134 EATPEARGFASGMASSEMLDAFARLSALTGQPLEAGLMSDLIKREICVRLLLSCAGQWLR 193 Query: 232 SISHQSYR-RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLK 290 S++ YR + + RA E++ + EP+ V L ++ TL + F + G P + K Sbjct: 194 SVTRDGYRDKGIVRAIEWLKLHYDEPLHVAQLAQLSGMASSTLHHNFRKLTGTSPVQYQK 253 Query: 291 RIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 +RL A R +++ + + V AA++ G+ + QF+ +Y + F PS + + RE G Sbjct: 254 SLRLQAARSLMLT---ERVDVNTAALRVGYESVAQFSREYARRFGAPPSRDI-KYAREAG 309 >UniRef50_Q0IBZ7 Possible AraC-type regulatory protein, putative n=1 Tax=Synechococcus sp. CC9311 RepID=Q0IBZ7_SYNS3 Length = 338 Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 65/330 (19%), Positives = 115/330 (34%), Gaps = 23/330 (6%) Query: 25 PKVEVDNVH-QRQTTDVYEHALTITAWQQIYD--QLHPGKFHGEFTEILLDDIQVFREYT 81 P V E A + +++D QL G G F+ + L D+ + T Sbjct: 15 PSATSARVSWSTNFNSASELAAALLRLGKVFDVLQLSSGPLEGHFSVVHLKDLSILSIQT 74 Query: 82 GLALRQSCLVWPNSFWFGIPATRG-EQGFIGSQCLGSAEIA-TRPGGTEFELSTPDDYTI 139 L + + F + + + I Q + + +P TE T Sbjct: 75 NQLLLLNGERGNDCICFSLEISGNFDDHRIFCQAIEPFSLHGFKPDLTESHFQLTAGSTS 134 Query: 140 LGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPEN 199 L + S + + +L L ++L++ L+ + Q A +N Sbjct: 135 LIAIASAKKFSGFLAHCGQLE-LLETLYTSNSLKLPP----NLYTKIVQQFAWHFKN--- 186 Query: 200 LHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISH---QSYRRLLSRAREYVLENMSEP 256 P + L + ++ E ++ ++L+ + EN ++P Sbjct: 187 ---PLINLELRSLHTCHIFTLMLEVFKGTKSQCFKLFEIAPRQQLIHEFINWGFENSTKP 243 Query: 257 VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAV----RRELISPWSQSMTVK 312 + + D+ + L SRRTL +GP L+ IRL V R + + V Sbjct: 244 LKLDDVSDILFSSRRTLIQGCKENFKMGPMEILRLIRLEQVNCVLRSIELRNSLELNKVG 303 Query: 313 DAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 D A +GF G F+ YQ + E P TL Sbjct: 304 DVANHFGFTSRGHFSAAYQNQYGETPRQTL 333 >UniRef50_B3SEQ8 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3SEQ8_TRIAD Length = 240 Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 97/236 (41%), Gaps = 14/236 (5%) Query: 117 SAEIATRPGGTEF--ELSTPDDYTILGVVLSEDVITRQA--NFLHNPDRVLHMLRNQSAL 172 +E+ T G F L P ++ E ++ N + + +L + R ++ Sbjct: 9 GSEVYTYSAGNFFINFLPLPVQTEVVEASEQEPFLSAALGINLVRLAEIILQIERIENQ- 67 Query: 173 EVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGA-----MLEEAQPM 227 E++ V A A + L + + + L A+ +L Sbjct: 68 EIQNSSFDTSCVVVGDADADLVDAFNRLLKVSRSEAEAAILGGAIIDEIYFRILTSEHGF 127 Query: 228 VTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNA 287 E ++ + + +S+A Y+ N+ + + V +L N ++S+ T NAF ++ + PN Sbjct: 128 ALRELLNQYGHIQPVSKAVNYIHANLDKSIQVEELANLSNMSKTTFFNAFKRLMHLPPNQ 187 Query: 288 WLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 ++K I+L + L Q M +A+ G+ QF+ +Y++ F PS TL Sbjct: 188 YIKGIKLQRAQALL----KQGMQANEASYHVGYSSFSQFSREYKRFFGFSPSQTLA 239 >UniRef50_UPI0001B55AC3 AraC family transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B55AC3 Length = 329 Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 63/287 (21%), Positives = 106/287 (36%), Gaps = 15/287 (5%) Query: 61 KFHGEFTEILLDDIQVFREYTGLALRQSCLVWP-NSFWFGIPATRGEQGFIG--SQCLGS 117 + + + V R G A+R S L + F +P + G S L Sbjct: 46 RLSARLDHLAAGSVSVNRLRYGAAVRISELAPEQDEFLLSLPVAGRARFAYGTASAVLRP 105 Query: 118 AEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQ 177 + F+L D++ + + L ++ R A L + + + A V Sbjct: 106 GTASVVSPYRAFQLDFDDEFEQVVLRLDRPLVERTAALLAGRPGPVAVQFDLRADTVSPG 165 Query: 178 HKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQS 237 A V+ A+ E H A+ + L E S + Sbjct: 166 VLA----LVEAAIHLSAEGARPGHLEALLAETLL---LGHPNTLSETLAADGKPPSSAR- 217 Query: 238 YRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAV 297 + RA +Y+ +++E ++ ++ VS R+LQ F G + WL+ RL+ Sbjct: 218 ----VRRAMDYLRAHLAESFSMAEVARHCGVSLRSLQIGFRRETGRTLSEWLREQRLDRA 273 Query: 298 RRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 R L + S TV A+ GF HLG FA +++ F E PS L + Sbjct: 274 RALLAAADPASTTVTATAIACGFVHLGDFAAQFKRRFGESPSAVLRE 320 >UniRef50_A9D6L8 Helix-turn-helix, AraC type n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D6L8_9RHIZ Length = 336 Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 101/249 (40%), Gaps = 22/249 (8%) Query: 97 WFGIPATRGEQGFIGSQ----CLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQ 152 WF + G I LG + A ++LS PD + L V + + + Sbjct: 85 WFLLSIQLERHGLIQQCGRIAELGLGDFALYSSIDPYDLSLPDGFRQLVVQIPRHDLLQ- 143 Query: 153 ANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDN 212 L N D + M + K+ + G V+ ++ + + PA R L D+ Sbjct: 144 --RLPNADLLTGM---------TVRGKSEIGGLVRDSVFRLVQAQSAV-NPATRHCLEDS 191 Query: 213 LLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEP-VTVLDLCNQLHVSRR 271 ++ L + AE++ + RL+ +A + + + +P + ++ L VS R Sbjct: 192 IIDLCATGLTT---LHGAEAVRTATEHRLIHQADTIIAQRIGDPYLDRAEIAAALSVSVR 248 Query: 272 TLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQ 331 L F A G + ++++RL + +L +P T+ AM+WG +L F+ ++ Sbjct: 249 RLSEVFQAE-GTSVASKIRQLRLAGIASDLRNPQFAGWTISAIAMRWGLNNLQHFSRIFR 307 Query: 332 QLFSEKPSL 340 + F P Sbjct: 308 ERFGVSPRE 316 >UniRef50_Q6W1W1 Probable AraC family transcriptional regulatory protein n=2 Tax=Rhizobium RepID=Q6W1W1_RHISN Length = 343 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 96/252 (38%), Gaps = 6/252 (2%) Query: 96 FWFGIPATRGEQGFIGSQCL--GSAEIATRPGGTEFELSTPDDYTIL-GVVLSEDVITRQ 152 +P + G G + G E+ + + ++ ++++ V+ + Sbjct: 80 LSIVVPRSGGMGVTYGPRTAEAGQGELLLYNNFEPNSVIMRGEENVVDELLINWSVVLQT 139 Query: 153 ANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDN 212 L + + + + + + L P + Sbjct: 140 LGQTFEAPF-DGSLDLVPQVSLATPAGQLIGNLTETIMGGIRNDGPLLQSPIAMAHVTQA 198 Query: 213 LLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRT 272 L + ++ + + R + RA E++ N+S P+T+ + VS R Sbjct: 199 LADVVVRLVPHRLSHL-LDKKPCLIAPRHVRRAIEFMQANISRPITMPMVAEAAGVSVRA 257 Query: 273 LQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQ 332 L+ F A P A+L R+RL A R++L+ P + + ++ ++WGF+H G+F+ Y+ Sbjct: 258 LETGFRAFRDTTPAAYLLRLRLRAARQDLLDPDN-NQPMRKICLKWGFFHFGRFSAVYRS 316 Query: 333 LFSEKPSLTLHQ 344 + E PS T + Sbjct: 317 TYGENPSDTRRR 328 >UniRef50_B5IQ44 Transcriptional regulator, AraC family protein n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IQ44_9CHRO Length = 334 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 47/195 (24%), Positives = 67/195 (34%), Gaps = 1/195 (0%) Query: 153 ANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDN 212 NP R + A +++AL E L D Sbjct: 140 PEARENPGLQARFNRPLVLDGSGDARLQATLTSLRRALRLLDEPQLQASGGFEALQLEDL 199 Query: 213 LLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRT 272 L + +L +L E++ ++ P+T+ L + S R Sbjct: 200 LRRHLVLLLWPDLIDPEPPPPMGPWRDPILEALLEWMDCHLDAPLTLTALALRSGDSVRN 259 Query: 273 LQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQ 332 LQ F LG P WL++ RL AV EL TV A + GF HL F+ +Q+ Sbjct: 260 LQYRFQRRLGCSPMQWLRQRRLEAVHAELSRGEPGG-TVAAIARRHGFHHLPTFSAAFQR 318 Query: 333 LFSEKPSLTLHQRMR 347 F PS L Q R Sbjct: 319 RFGILPSQLLRQGKR 333 >UniRef50_A1ZYI4 Putative transcriptional regulator n=2 Tax=Bacteroidetes RepID=A1ZYI4_9SPHI Length = 303 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 92/234 (39%), Gaps = 15/234 (6%) Query: 117 SAEIATRPGGTEFELSTPD-----DYTILGVVLSEDVITRQANFL-HNPDRVLHMLRNQS 170 E PG + P+ L + ++ED I + A L N ++ Sbjct: 73 PGESLILPGNETMCIDFPEASLQKPTRCLAMAINEDKIKKIAALLNENMPKIDGNEWRFI 132 Query: 171 ALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTA 230 + A+ G +Q+ L F EN P+ + + D +L + + + + Sbjct: 133 DFNFHFTNDVAIHGIIQRLLFLFTEN-----HPS-KDIFADFMLKELIIRILQKENREHF 186 Query: 231 ESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLK 290 S+ Q L+ +Y+ EN+ +P+++ L +Q+H+S F LG+ P ++ Sbjct: 187 SSVQSQPDDHRLTYVIKYIKENLDQPLSIQHLSDQVHMSESNFYRVFKNELGVSPTDFIN 246 Query: 291 RIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 R+ R L P + +K+ ++ GF + F +++ PS + Sbjct: 247 DERIKLATRLLHDPHKK---IKEVYLECGFNSMSYFTRLFKRKKKASPSEFQRK 297 >UniRef50_B9JGH7 Transcriptional regulator protein n=14 Tax=Proteobacteria RepID=B9JGH7_AGRRK Length = 335 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 99/278 (35%), Gaps = 28/278 (10%) Query: 71 LDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGS--QCLGSAEIATRPGGTE 128 ++ + ++R+ + Q P F I + +G+ G E Sbjct: 62 IEGLNLYRQSAAT-VWQHGAYRP---CFAIVVQGHKTLTVGADTYHYGVGEYILTA---- 113 Query: 129 FELSTPDDYTILGVVLSEDVI--------TRQANFLHNPDRVLHMLRNQSALEVKEQHKA 180 L P + V + R L + + + + Sbjct: 114 --LDLPVSTQVTNVGSETPYLCFGMALDSERLKELLSRVGIPREAVTAEPVRGLAVNPAS 171 Query: 181 ALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRR 240 L + PE++ PA+ ++ +L + L + +S Sbjct: 172 PELLDASLRLLRLLDRPEDI--PAMAPLIEQEILYRL---LTGPNGPRLLQVAMAESQSN 226 Query: 241 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE 300 ++RA ++ N ++P+ + +L + +S +L + F A+ + P + K++RL+ RR Sbjct: 227 RVARAIAWIRGNFTQPLRIEELAERAGMSVSSLHHHFKAVTAMTPIQYQKQLRLHEARRL 286 Query: 301 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKP 338 +I + + V A + G+ QF+ +Y +L+ P Sbjct: 287 MI---VEQLDVGSAGHRVGYQSPSQFSREYSRLYGLSP 321 >UniRef50_B4E7T1 AraC family regulatory protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4E7T1_BURCJ Length = 317 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 54/273 (19%), Positives = 107/273 (39%), Gaps = 30/273 (10%) Query: 80 YTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQ----CLGSAEIATRPGGTEFELSTPD 135 T +RQ ++ F I +G + L + + + + LS D Sbjct: 68 RTSRLVRQ-----EDADLFLISVQVAGRGELEQDGRQAVLSAGDCSLYDTTRPYHLSFRD 122 Query: 136 DYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCE 195 D+ L + + D + +R +A + + G Sbjct: 123 DFEQLVLSIPRDRLR---------------IRIPAADRLTAIPIRGVNGLGSLFFDLVTS 167 Query: 196 NPENLHQ--PAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENM 253 P NL VR+ + +++L + L + A + + + + L+R + YV+EN+ Sbjct: 168 IPRNLESMTAQVRESVSNSVLDLVATALAGLPSPIPAPASNLKQF--HLNRIKSYVIENL 225 Query: 254 SEP-VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVK 312 S+ + + + L +S +L AF A G + W+ RL+A R+ L+ +++ K Sbjct: 226 SDAELDIARIAQTLGMSVSSLYRAF-ASEGCPLSQWIWDQRLHACRKALLDESCANLSAK 284 Query: 313 DAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 AM WGF F+ +++ F E P+ ++ Sbjct: 285 QIAMSWGFNDPAHFSRAFRRKFGESPNALRTRK 317 >UniRef50_B9M3B3 Transcriptional regulator, AraC family n=1 Tax=Geobacter sp. FRC-32 RepID=B9M3B3_GEOSF Length = 292 Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 78/221 (35%), Gaps = 18/221 (8%) Query: 120 IATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHK 179 +A PG E+ + + +++S + R+A + R E Sbjct: 82 VAIDPGSLHHEVPGQEQSRYIAILISHTLHDREARQYDLAGKAYDFHRFFPGPE------ 135 Query: 180 AALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYR 239 L +++ + P VL + ++L A + + S H S R Sbjct: 136 --LINLLKEFMTE-----HEAGLPGGEAVLAAVSIRITHSILRAAHGVNS--SAPHISNR 186 Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 ++R EY+ E VTV + +S F G+ P +L +RL RR Sbjct: 187 IEINRVVEYLHRRYGEKVTVDKMATVAAMSPSHFSRVFRKETGLSPMNYLIDLRLAKARR 246 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSL 340 L+S V A++ GF F +++ F PS Sbjct: 247 LLVSGE---TCVTSVALRCGFASHSHFTDTFRKRFGCPPSD 284 >UniRef50_B8JHL7 Transcriptional regulator, AraC family n=5 Tax=Proteobacteria RepID=B8JHL7_ANAD2 Length = 311 Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 79/211 (37%), Gaps = 5/211 (2%) Query: 130 ELSTPDDYTILGVVLSEDVI-TRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQ 188 L P +L + L ++ + + E AL Sbjct: 86 SLDVPASSQVLEASPKRPCLGLTLKLDLRLLAELVPQVHLAAREERSAAKGMALGAVTPP 145 Query: 189 ALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESI-SHQSYRRLLSRARE 247 L F + L +P VL + + L + I S S ++RA E Sbjct: 146 LLDAFMRLTDLLDEPDAIDVLAPLVRRELHYRLLTSDQAGRLRQIASVGSQSHAIARAIE 205 Query: 248 YVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQ 307 ++ N + P+ + +L ++H+S +L F + + P + K +RLN RR +++ + Sbjct: 206 WLKVNYAAPLRIAELAARVHMSPSSLHQHFRQLTAMSPLQYQKWLRLNEARRVMLN---E 262 Query: 308 SMTVKDAAMQWGFWHLGQFATDYQQLFSEKP 338 AA + G+ QF+ +Y +LF P Sbjct: 263 GFDAAGAAFKVGYESPSQFSREYARLFGAPP 293 >UniRef50_B1J6N5 Transcriptional regulator, AraC family n=3 Tax=Pseudomonas RepID=B1J6N5_PSEPW Length = 341 Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 100/259 (38%), Gaps = 12/259 (4%) Query: 91 VWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEF-ELSTPDDYTILGVVLSEDVI 149 + F +P + +G A++ E + D + G+ + V Sbjct: 89 TPQDEITFVLPTAGKIIFDHRGESIGGAQVGLAVDKLEIRSVRIADGHAQCGMSIRRGVF 148 Query: 150 TRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVL 209 + + L ++ +R +++ + ++ LAT E + ++ + + Sbjct: 149 AERLSALLERP-LVAPIRFAPVVDLNAPGFQGIRALLE--LATGTEFDQLINTGLLMPL- 204 Query: 210 GDNLLMAMGAMLEEAQPMVTAESISHQS---YRRLLSRAREYVLENMSEPVTVLDLCNQL 266 L + L E P E++ + R + A Y+ E+ + + +L Sbjct: 205 --RLQEMLVDALLETWPHNYREALHRPAPLLAPRHVKLAMAYIREHPASLSSSSELAGLA 262 Query: 267 HVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQF 326 +VS R LQ F G + +++RL R+ L Q +V+ A+++GF + G+F Sbjct: 263 NVSVRALQEGFRRFAGTSIVGYQRQVRLEQARQVL--ASEQGASVEQVALRFGFTNAGRF 320 Query: 327 ATDYQQLFSEKPSLTLHQR 345 A +Q+ F +P+ + Sbjct: 321 AQYFQEAFGLRPAQVRRRH 339 >UniRef50_A9IG97 Transcriptional regulator, AraC family n=4 Tax=Proteobacteria RepID=A9IG97_BORPD Length = 327 Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 4/155 (2%) Query: 193 FCENPENLHQPAVR-KVLGDNLLMAMGAMLEEAQPMVTAES-ISHQSYRRLLSRAREYVL 250 P +PA + + L + A + P +++ + L +Y+ Sbjct: 170 ASSAPTCAGEPAAWVEHIEQGLASLLRAASSCSLPRESSDRNFVARDPIARLQAMEDYMR 229 Query: 251 ENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMT 310 E + P+ + DL VS R LQ + P L+ +RL+AV L S Sbjct: 230 ERLGAPIGLADLSGAAGVSARVLQQTCQRHRQMSPMELLRDMRLDAVHAWL--SEHPSAN 287 Query: 311 VKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 + + A+ +GF HLG+FA Y+Q F E P T +R Sbjct: 288 ITETALFYGFGHLGRFAAYYRQRFGESPHQTAQRR 322 >UniRef50_C6CSL0 Transcriptional regulator, AraC family n=2 Tax=Paenibacillus sp. JDR-2 RepID=C6CSL0_PAESJ Length = 301 Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 50/294 (17%), Positives = 111/294 (37%), Gaps = 22/294 (7%) Query: 61 KFHGE---FTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGS 117 +F G+ E + + +FR+ S V S F + Sbjct: 18 RFAGQQNGVHETPISSLFLFRQ--NQPTEPSHGVHSRSICFVFQGKKEVSLAEERFPYSP 75 Query: 118 AEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQ 177 E + P IL + + F +P+++L +++ +S ++ + Q Sbjct: 76 DEYLVAS------VELPVISRILEASSERPYLALKLEF--SPEQILGVMK-ESGIQPRPQ 126 Query: 178 HKAALWGFVQQALATFCEN----PENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESI 233 A F+ Q + + + L QP +L L+ + + +++ V+ E + Sbjct: 127 EHARRGLFIGQMERSLTDAIHRLVQLLEQPDDIPLLAPLLIKEILYRILQSKHGVSLEQL 186 Query: 234 SHQSYRRL-LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRI 292 + + + +++ +N + + +L ++S TL F + + P + K + Sbjct: 187 ALEGGGAFRIKEVIDHIKKNYEKSIRSDELAAIANMSVPTLYRHFKEVTAMSPIQFQKHL 246 Query: 293 RLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 RL A R L+ S+ + D A + G+ QF+ +Y ++F P + + Sbjct: 247 RLQAARSLLL---SEPVNAADVAFRVGYESPSQFSREYARMFGLSPIQDIKRLR 297 >UniRef50_C5CMS2 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CMS2_VARPS Length = 330 Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 73/158 (46%), Gaps = 11/158 (6%) Query: 190 LATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYV 249 L E+PE++ P + ++ ++ + E A+ A SH + +++A + Sbjct: 166 LLRLVESPEDV--PIMAPLIKREIMYRLLVNGEGARLRQIALQDSHT---QRIAKAISAL 220 Query: 250 LENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSM 309 N S+ + + D+ +H+S + + F A+ + P + K++RL RR+++ + Sbjct: 221 RINYSQSLRIEDMARAVHMSVSSFHHHFKAVTAMSPLQYQKQLRLQEARRQMLMAGAD-- 278 Query: 310 TVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 V AA G+ QFA +Y ++F P L + R Sbjct: 279 -VSSAAHSVGYESPSQFAREYSRMFGAPP---LRDKRR 312 >UniRef50_C0VLQ6 AraC-type DNA-binding domain-containing protein n=2 Tax=Acinetobacter RepID=C0VLQ6_9GAMM Length = 291 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 99/279 (35%), Gaps = 27/279 (9%) Query: 71 LDDIQVFREYTGL---ALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGT 127 +D I + R A+ Q + F + ++ + E Sbjct: 25 IDGITLMRVDHNTPPLAVLQ-----EPTLVFVLQGSKRGYIGTETYAFQQGECLIVSVSM 79 Query: 128 EFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLH-----MLRNQSALEVKEQHKAAL 182 F+ T + + + + N L + + + S ++ E + Sbjct: 80 PFDCDTVASPELPMIAMIMKLEADTVNELLAKTYLENDKFKPLTTGMSVIQYDET----I 135 Query: 183 WGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLL 242 + + L T ++L +LG+ + + + + + Q R + Sbjct: 136 SNVLIRLLKTLSSEQDSL-------ILGEQIKRELLYRVIQHSGADALTGLVVQGNLRQI 188 Query: 243 SRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELI 302 + EY+ + +E +TV L Q ++S AF + P +LK RL+ ++ L Sbjct: 189 YKICEYIQHHFTEKLTVEMLAEQANMSISAFHKAFKQVTLHSPLQYLKVTRLHKAKQML- 247 Query: 303 SPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 +++ +V AA G+ QF+ ++++ F P+ T Sbjct: 248 --QNENQSVAQAAYAVGYQSSSQFSREFKKQFGFSPNQT 284 >UniRef50_A3WIM7 Probable transcriptional regulator n=1 Tax=Idiomarina baltica OS145 RepID=A3WIM7_9GAMM Length = 309 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 52/281 (18%), Positives = 108/281 (38%), Gaps = 23/281 (8%) Query: 65 EFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEI---- 120 T+ +DDI + +R ++ +G+ + ++ Sbjct: 25 SLTQTAIDDISLMHLSNPSQVRPIIYRPA----VCFMLQGAKELLVGNTKVTYEQMNYLL 80 Query: 121 --ATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQH 178 P ++PD+ +G+ + D + L DR+ +++QS+L V + Sbjct: 81 IPVVFPVSGRVSQASPDN-PYVGLSFNFDTAELRELILLLGDRIPATVKSQSSLCVGKVD 139 Query: 179 KAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISH-QS 237 + + E L +P KVL + + L + + + Sbjct: 140 --------SEMMQLLERATELLEKPDDAKVLFPLIRRELMYRLLLGELGGLLRDFNLIDT 191 Query: 238 YRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAV 297 +++A + + + EP+ V DL + +H+S AF ++ + P + K++RL+ Sbjct: 192 QASRIAQAIDIIKRRLHEPLRVKDLASAVHLSESAFYQAFKSVTAMSPIQFQKKLRLDEA 251 Query: 298 RRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKP 338 RR ++ S V A Q G+ QF+ +Y +LF + P Sbjct: 252 RRIMLFEGSD---VSTACYQVGYESPSQFSREYSRLFGQSP 289 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P36547 HTH-type transcriptional regulator eutR n=115 Ta... 371 e-101 UniRef50_A6VSI6 Helix-turn-helix-domain containing protein AraC ... 277 6e-73 UniRef50_Q5P0V5 Transcriptional regulator, AraC family, n=3 Tax=... 267 4e-70 UniRef50_Q1N3C0 HTH-type transcriptional regulator eutR n=1 Tax=... 258 2e-67 UniRef50_A1VQJ8 Transcriptional regulator, AraC family n=4 Tax=B... 256 9e-67 UniRef50_Q1H3X2 Transcriptional regulator, AraC family n=3 Tax=P... 255 2e-66 UniRef50_B7KJD4 Transcriptional regulator, AraC family n=1 Tax=C... 255 2e-66 UniRef50_C6WX32 Transcriptional regulator, AraC family n=2 Tax=P... 254 3e-66 UniRef50_B9Z415 Transcriptional regulator, AraC family n=1 Tax=L... 246 1e-63 UniRef50_Q87WL8 Transcriptional regulator, AraC family n=5 Tax=P... 244 3e-63 UniRef50_Q5P5Q4 Probable regulatory protein n=1 Tax=Aromatoleum ... 241 3e-62 UniRef50_A9AKQ9 AraC family transcriptional regulator n=1 Tax=Bu... 235 2e-60 UniRef50_A0B2C1 Transcriptional regulator, AraC family n=17 Tax=... 235 2e-60 UniRef50_A6W073 Helix-turn-helix-domain containing protein AraC ... 234 3e-60 UniRef50_A0B1I5 Transcriptional regulator, AraC family n=25 Tax=... 234 4e-60 UniRef50_B1Z491 Transcriptional regulator, AraC family n=6 Tax=B... 230 5e-59 UniRef50_A7JZD1 Ethanolamine operon regulatory protein n=3 Tax=V... 230 6e-59 UniRef50_C4KY56 Ethanolamine operon transcriptional activator Eu... 230 6e-59 UniRef50_C4I2G6 Transcriptional regulator, AraC family n=26 Tax=... 229 8e-59 UniRef50_D1T8Q5 AraC family transcriptional regulator n=1 Tax=Bu... 229 9e-59 UniRef50_A0Y3G2 Transcriptional regulator, AraC family protein n... 229 1e-58 UniRef50_A1SRM6 DNA-binding helix-turn-helix domain-containing t... 228 2e-58 UniRef50_C6XCD3 Transcriptional regulator, AraC family n=1 Tax=M... 228 2e-58 UniRef50_B2I0G9 AraC-type DNA-binding domain-containing protein ... 226 1e-57 UniRef50_A5EB19 Transcriptional regulator, AraC family n=2 Tax=B... 224 3e-57 UniRef50_B1YYW7 Transcriptional regulator, AraC family n=5 Tax=B... 224 5e-57 UniRef50_C3KB89 Putative AraC family regulatory protein n=1 Tax=... 222 1e-56 UniRef50_C3KBA5 AraC family regulatory protein n=2 Tax=Proteobac... 222 1e-56 UniRef50_C4KAZ9 Transcriptional regulator, AraC family n=1 Tax=T... 222 2e-56 UniRef50_C6QHZ1 Transcriptional regulator, AraC family n=1 Tax=H... 220 8e-56 UniRef50_A2SJ66 Transcriptional regulator, AraC family n=1 Tax=M... 218 2e-55 UniRef50_D1SW59 Transcriptional regulator, AraC family n=5 Tax=P... 218 3e-55 UniRef50_A5EM40 Transcriptional regulator, AraC family n=1 Tax=B... 217 6e-55 UniRef50_Q88I52 Transcriptional regulator, AraC family n=8 Tax=P... 213 8e-54 UniRef50_D1T5H4 AraC family transcriptional regulator n=1 Tax=Bu... 212 1e-53 UniRef50_A2SII1 Transcriptional regulator, AraC family n=1 Tax=M... 212 2e-53 UniRef50_B4AUP2 Transcriptional regulator, AraC family n=1 Tax=C... 210 8e-53 UniRef50_A1TWG5 Transcriptional regulator, AraC family n=2 Tax=A... 208 2e-52 UniRef50_C5AKE9 Transcriptional regulator, AraC family protein n... 207 4e-52 UniRef50_Q488C6 Transcriptional regulator, AraC family n=2 Tax=C... 207 4e-52 UniRef50_D2BF03 AraC family transcriptional regulator n=1 Tax=St... 205 1e-51 UniRef50_Q1LI32 Transcriptional regulator, AraC family n=3 Tax=C... 205 1e-51 UniRef50_A1K6X6 Putative AraC-family transcriptional regulator n... 204 6e-51 UniRef50_Q39MU6 Transcriptional regulator, AraC family n=10 Tax=... 201 4e-50 UniRef50_A4JQI4 Transcriptional regulator, AraC family n=5 Tax=B... 200 5e-50 UniRef50_A1WJE1 Transcriptional regulator, AraC family n=1 Tax=V... 200 7e-50 UniRef50_Q46TV6 Transcriptional regulator, AraC family n=1 Tax=R... 199 1e-49 UniRef50_A1K6U8 Putative AraC-family transcriptional regulator n... 199 1e-49 UniRef50_Q6W1W0 Putative AraC family transcriptional regulatory ... 197 4e-49 UniRef50_A5VD66 Transcriptional regulator, AraC family n=1 Tax=S... 197 5e-49 UniRef50_A1UDL6 Transcriptional regulator, AraC family n=6 Tax=M... 197 6e-49 UniRef50_Q47GE0 Transcriptional regulator, AraC family n=1 Tax=D... 195 1e-48 UniRef50_P43462 Probable thc operon regulatory protein n=3 Tax=R... 194 6e-48 UniRef50_Q0K6C4 Transcriptional regulator, AraC-family n=3 Tax=C... 192 1e-47 UniRef50_Q0SIM0 Transcriptional regulator, AraC family protein n... 192 2e-47 UniRef50_Q5LPA0 Transcriptional regulator, AraC family n=1 Tax=R... 190 5e-47 UniRef50_A1T7M7 Transcriptional regulator, AraC family n=2 Tax=M... 190 7e-47 UniRef50_Q0SE50 Transcriptional regulator, AraC family protein n... 190 8e-47 UniRef50_B9JJ57 Transcriptional regulator protein n=1 Tax=Agroba... 190 9e-47 UniRef50_A1K6W1 Putative AraC-family transcriptional regulator n... 189 1e-46 UniRef50_B6B515 Transcriptional regulator, AraC family n=1 Tax=R... 189 2e-46 UniRef50_B8ESU5 Transcriptional regulator, AraC family n=1 Tax=M... 189 2e-46 UniRef50_Q0K462 Transcriptional regulator, AraC-family n=1 Tax=R... 189 2e-46 UniRef50_B9JJ58 Transcriptional regulator protein n=1 Tax=Agroba... 188 2e-46 UniRef50_A4EX82 Transcriptional regulator, AraC family protein n... 188 3e-46 UniRef50_B3Q2C8 Putative transcriptional regulator protein, AraC... 187 6e-46 UniRef50_UPI00006A2B14 UPI00006A2B14 related cluster n=1 Tax=Xen... 186 9e-46 UniRef50_Q0S024 Transcriptional regulator, AraC family protein n... 186 1e-45 UniRef50_Q3LUX0 Transcriptional activator (Fragment) n=2 Tax=Pse... 185 1e-45 UniRef50_Q05335 XylDLEGF operon transcriptional activator 3 n=35... 185 2e-45 UniRef50_Q2G526 Transcriptional regulator, AraC family n=1 Tax=N... 185 2e-45 UniRef50_C7N068 DNA-binding domain-containing protein, AraC-type... 184 3e-45 UniRef50_C6B4J9 Transcriptional regulator, AraC family n=8 Tax=R... 184 5e-45 UniRef50_A9BUW9 Transcriptional regulator, AraC family n=1 Tax=D... 184 6e-45 UniRef50_B0SX63 Transcriptional regulator, AraC family n=1 Tax=C... 183 7e-45 UniRef50_A3YU12 Transcriptional regulator, AraC family protein n... 183 7e-45 UniRef50_B3Q6V1 Transcriptional regulator, AraC family n=2 Tax=R... 183 8e-45 UniRef50_C6B4N8 Transcriptional regulator, AraC family n=13 Tax=... 182 1e-44 UniRef50_A5V4X1 Transcriptional regulator, AraC family n=2 Tax=S... 182 2e-44 UniRef50_A5V484 Transcriptional regulator, AraC family n=2 Tax=S... 181 3e-44 UniRef50_Q13EW4 Transcriptional regulator, AraC family n=5 Tax=R... 181 3e-44 UniRef50_C3KLK8 Probable transcriptional regulator protein, AraC... 181 3e-44 UniRef50_D0LFC4 Helix-turn-helix-domain containing protein AraC ... 181 4e-44 UniRef50_A3K773 Transcriptional regulator, AraC family protein n... 180 6e-44 UniRef50_B3Q2F7 Probable transcriptional regulator protein, AraC... 180 7e-44 UniRef50_B6A526 Transcriptional regulator, AraC family n=4 Tax=R... 180 9e-44 UniRef50_Q4KIN6 Transcriptional regulator, AraC family n=15 Tax=... 180 9e-44 UniRef50_A6QA54 Putative uncharacterized protein n=1 Tax=Sulfuro... 179 1e-43 UniRef50_C4DJB3 DNA-binding domain-containing protein, AraC-type... 179 2e-43 UniRef50_C5CKJ3 Transcriptional regulator, AraC family n=2 Tax=V... 179 2e-43 UniRef50_A1WJA6 Transcriptional regulator, AraC family n=1 Tax=V... 178 2e-43 UniRef50_Q39N46 Transcriptional regulator, AraC family n=2 Tax=B... 178 3e-43 UniRef50_A0NVQ0 Transcriptional regulator, AraC family protein n... 177 4e-43 UniRef50_A1R1F9 Transcriptional regulator, AraC family n=1 Tax=A... 177 5e-43 UniRef50_Q0SDR9 Transcriptional regulator, AraC family protein n... 177 5e-43 UniRef50_D1U469 Transcriptional regulator, AraC family n=1 Tax=D... 177 6e-43 UniRef50_C5CZK1 Transcriptional regulator, AraC family n=1 Tax=V... 177 7e-43 UniRef50_B8Y4V1 EthR n=4 Tax=Corynebacterineae RepID=B8Y4V1_9NOCA 176 9e-43 UniRef50_A6EXV2 BenABC operon transcriptional activator BenR n=2... 176 1e-42 UniRef50_Q5Z0F0 Putative transcriptional regulator n=1 Tax=Nocar... 175 2e-42 UniRef50_Q46VL0 Transcriptional regulator, AraC family n=1 Tax=R... 175 2e-42 UniRef50_Q5YXL4 Putative transcriptional regulator n=1 Tax=Nocar... 175 2e-42 UniRef50_Q2IVS4 Transcriptional regulator, AraC family n=2 Tax=R... 175 2e-42 UniRef50_B3QCR7 Transcriptional regulator, AraC family n=2 Tax=R... 175 2e-42 UniRef50_D1BV80 Transcriptional regulator, AraC family n=1 Tax=X... 174 3e-42 UniRef50_B2I0G2 AraC-type DNA-binding domain-containing protein ... 174 4e-42 UniRef50_C3MI82 Putative AraC family transcriptional regulatory ... 174 4e-42 UniRef50_Q07KT1 Transcriptional regulator, AraC family n=1 Tax=R... 174 5e-42 UniRef50_C6B5E0 Transcriptional regulator, AraC family n=7 Tax=R... 173 6e-42 UniRef50_B7RQR5 Transcriptional regulator, AraC family n=1 Tax=R... 173 6e-42 UniRef50_C9PH24 Ethanolamine operon regulatory protein n=1 Tax=V... 172 1e-41 UniRef50_C3KLQ8 Probable transcriptional regulator protein, AraC... 172 2e-41 UniRef50_Q987P8 Transcriptional regulator n=1 Tax=Mesorhizobium ... 172 2e-41 UniRef50_Q47CB9 Transcriptional regulator, AraC family n=1 Tax=D... 172 3e-41 UniRef50_UPI0001C38021 transcriptional regulator, AraC family pr... 171 4e-41 UniRef50_Q89FI3 Transcriptional regulatory protein n=3 Tax=Brady... 171 4e-41 UniRef50_B3QH76 Transcriptional regulator, AraC family n=3 Tax=R... 171 4e-41 UniRef50_A2SM26 Transcriptional regulator, AraC family n=1 Tax=M... 170 5e-41 UniRef50_Q3JJW1 AndR n=53 Tax=Burkholderia RepID=Q3JJW1_BURP1 170 6e-41 UniRef50_A5VE15 Transcriptional regulator, AraC family n=1 Tax=S... 170 7e-41 UniRef50_B9JM27 Transcriptional regulator protein, AraC family n... 169 1e-40 UniRef50_Q0K9L2 Transcriptional regulator, AraC-family n=2 Tax=C... 169 2e-40 UniRef50_Q89CX9 Transcriptional regulatory protein n=1 Tax=Brady... 168 2e-40 UniRef50_C5CKJ0 Transcriptional regulator, AraC family n=1 Tax=V... 168 2e-40 UniRef50_C3UVB3 Putative AraC family transcriptional regulator n... 168 3e-40 UniRef50_C5CKL4 Transcriptional regulator, AraC family n=1 Tax=V... 168 3e-40 UniRef50_B2T964 Transcriptional regulator, AraC family n=1 Tax=B... 168 3e-40 UniRef50_B5W7W7 Transcriptional regulator, AraC family n=1 Tax=A... 167 5e-40 UniRef50_A3YW71 Transcriptional regulator, AraC family protein n... 167 6e-40 UniRef50_A5V6I0 Helix-turn-helix-domain containing protein, AraC... 167 8e-40 UniRef50_A5V4Y1 Transcriptional regulator, AraC family n=1 Tax=S... 166 1e-39 UniRef50_C4KBC2 Transcriptional regulator, AraC family n=1 Tax=T... 166 1e-39 UniRef50_B9JL66 Transcriptional regulator protein n=1 Tax=Agroba... 166 1e-39 UniRef50_UPI00016A2E59 transcriptional regulator, AraC family pr... 165 2e-39 UniRef50_A5V7Y2 Transcriptional regulator, AraC family n=1 Tax=S... 165 2e-39 UniRef50_B8H6K6 Transcriptional regulator, AraC family n=2 Tax=A... 165 2e-39 UniRef50_Q0SCS8 Transcriptional regulator, AraC family protein n... 165 2e-39 UniRef50_B3QGC9 Transcriptional regulator, AraC family n=5 Tax=R... 165 2e-39 UniRef50_Q9AJR3 Transcriptional activator n=2 Tax=Proteobacteria... 165 2e-39 UniRef50_A1K4I0 Putative AraC-family transcriptional regulator n... 165 3e-39 UniRef50_A0K0Q9 Transcriptional regulator, AraC family n=2 Tax=A... 165 3e-39 UniRef50_Q0RUS5 Possible transcriptional regulator, AraC family ... 164 4e-39 UniRef50_Q05X95 Transcriptional regulator, AraC family protein n... 164 4e-39 UniRef50_A9EZ15 Transcriptional regulator, AraC family protein n... 164 5e-39 UniRef50_Q1Q9Q6 Transcriptional regulator, AraC family n=2 Tax=G... 163 5e-39 UniRef50_A5INH3 Transcriptional regulator, AraC family n=5 Tax=T... 163 6e-39 UniRef50_D2M666 Transcriptional regulator, AraC family n=1 Tax=R... 162 1e-38 UniRef50_UPI0001B566E3 AraC family transcriptional regulator n=1... 162 2e-38 UniRef50_A6VRG8 Helix-turn-helix-domain containing protein AraC ... 162 2e-38 UniRef50_C6WK40 Transcriptional regulator, AraC family n=1 Tax=A... 161 4e-38 UniRef50_B9K3F5 Transcriptional regulator AraC family n=1 Tax=Ag... 160 6e-38 UniRef50_A7ICV7 Helix-turn-helix-domain containing protein AraC ... 160 6e-38 UniRef50_C3X9E6 Transcriptional regulator n=2 Tax=Proteobacteria... 160 7e-38 UniRef50_A6EWL3 Helix-turn-helix, AraC type:Arac protein, arabin... 160 1e-37 UniRef50_Q8RL38 Putative uncharacterized protein n=2 Tax=Burkhol... 159 1e-37 UniRef50_D0I5P8 Transcriptional regulator AraC family n=1 Tax=Gr... 159 1e-37 UniRef50_B5ZVG3 Transcriptional regulator, AraC family n=1 Tax=R... 159 2e-37 UniRef50_B2HDE9 Transcriptional regulatory protein n=1 Tax=Mycob... 158 2e-37 UniRef50_A9I2R8 AraC-type transcriptional regulator n=3 Tax=Burk... 158 2e-37 UniRef50_Q0KJU2 Positive transcriptional regulator for anthranil... 158 2e-37 UniRef50_UPI0001B5656E AraC family transcriptional regulator n=1... 158 3e-37 UniRef50_B4EDN0 AraC family regulatory protein n=1 Tax=Burkholde... 158 3e-37 UniRef50_Q2SF73 AraC-type DNA-binding domain-containing protein ... 157 6e-37 UniRef50_A5EL73 Transcriptional regulator, AraC family n=2 Tax=B... 157 6e-37 UniRef50_Q1QJ52 Transcriptional regulator, AraC family n=1 Tax=N... 157 7e-37 UniRef50_B4E7T1 AraC family regulatory protein n=1 Tax=Burkholde... 157 8e-37 UniRef50_Q0S6X8 Transcriptional regulator, AraC family protein n... 157 8e-37 UniRef50_A5V5G7 Transcriptional regulator, AraC family n=1 Tax=S... 157 9e-37 UniRef50_Q0IBZ7 Possible AraC-type regulatory protein, putative ... 157 9e-37 UniRef50_C6RKI0 Transcriptional regulator, AraC family n=2 Tax=A... 156 9e-37 UniRef50_C3JZK1 AraC family regulatory protein n=1 Tax=Pseudomon... 156 1e-36 UniRef50_Q0C048 Transcriptional regulator, AraC family n=5 Tax=A... 156 1e-36 UniRef50_UPI0001AF5566 helix-turn-helix domain-containing protei... 156 1e-36 UniRef50_Q46855 Uncharacterized HTH-type transcriptional regulat... 155 2e-36 UniRef50_A2SEG7 Transcriptional regulator, AraC family n=1 Tax=M... 155 2e-36 UniRef50_B2I1B8 AraC-type DNA-binding domain-containing protein ... 155 2e-36 UniRef50_C0VLQ6 AraC-type DNA-binding domain-containing protein ... 155 2e-36 UniRef50_Q4C4B2 Helix-turn-helix, AraC type n=1 Tax=Crocosphaera... 155 3e-36 UniRef50_A9U6Q0 Predicted protein n=1 Tax=Physcomitrella patens ... 154 4e-36 UniRef50_A4XVM8 Transcriptional regulator, AraC family n=15 Tax=... 154 5e-36 UniRef50_A6W3U9 AraC-type transcriptional regulator domain prote... 154 6e-36 UniRef50_A4THW4 Transcriptional regulator, AraC family n=17 Tax=... 153 6e-36 UniRef50_A8KCK0 HTH AraC-type regulator n=1 Tax=[Polyangium] bra... 153 6e-36 UniRef50_UPI0001909603 transcriptional regulator, AraC family pr... 153 7e-36 UniRef50_C8Q8U1 Transcriptional regulator, AraC family n=1 Tax=P... 153 8e-36 UniRef50_A4CW16 Transcriptional regulator, AraC family protein n... 153 1e-35 UniRef50_C0N265 AraC-type transcriptional regulator N-terminus d... 153 1e-35 UniRef50_C0GAC0 AraC-family transcriptional regulator n=4 Tax=Br... 153 1e-35 UniRef50_B8HJE0 Transcriptional regulator, AraC family n=1 Tax=A... 152 1e-35 UniRef50_B8FM47 Transcriptional regulator, AraC family n=1 Tax=D... 152 2e-35 UniRef50_C1BBD9 Putative AraC family transcriptional regulator n... 152 2e-35 UniRef50_UPI00019090B3 AraC family transcriptional regulator n=1... 152 2e-35 UniRef50_C3PKW7 Transcription regulator, AraC family n=2 Tax=Cor... 152 2e-35 UniRef50_Q3JGA1 AraC family regulatory protein n=57 Tax=Bacteria... 152 3e-35 UniRef50_C6CSL0 Transcriptional regulator, AraC family n=2 Tax=P... 152 3e-35 UniRef50_D0KFC4 Transcriptional regulator, AraC family n=2 Tax=P... 151 3e-35 UniRef50_C6DIU8 Transcriptional regulator, AraC family n=3 Tax=P... 151 3e-35 UniRef50_A5VE01 Helix-turn-helix-domain containing protein, AraC... 151 4e-35 UniRef50_A1T1B9 Transcriptional regulator, AraC family n=2 Tax=M... 151 4e-35 UniRef50_Q140Z5 Transcriptional regulator, AraC family n=2 Tax=B... 150 5e-35 UniRef50_A6X646 Helix-turn-helix-domain containing protein AraC ... 150 6e-35 UniRef50_B5S3I4 Probable transcription regulator sugar transport... 150 6e-35 UniRef50_C6BWP6 Transcriptional regulator, AraC family n=1 Tax=D... 150 7e-35 UniRef50_B1G4X3 Transcriptional regulator, AraC family n=1 Tax=B... 150 8e-35 UniRef50_B1YXB0 Transcriptional regulator, AraC family n=2 Tax=B... 150 9e-35 UniRef50_C1AVG9 Putative AraC family transcriptional regulator n... 149 1e-34 UniRef50_UPI00016AB122 ethanolamine operon transcriptional activ... 149 1e-34 UniRef50_B9JBG2 Transcriptional regulator protein n=2 Tax=Proteo... 149 1e-34 UniRef50_Q1MZH6 Putative transcriptional regulator n=1 Tax=Berma... 149 2e-34 UniRef50_B9JGH7 Transcriptional regulator protein n=14 Tax=Prote... 149 2e-34 UniRef50_Q38ZW3 Transcriptional regulator, AraC family n=2 Tax=B... 149 2e-34 UniRef50_B8KQ27 Transcriptional regulator, AraC family n=1 Tax=g... 149 2e-34 UniRef50_B4EQD3 AraC family regulatory protein n=13 Tax=Proteoba... 149 2e-34 UniRef50_A5V4Y7 Transcriptional regulator, AraC family n=1 Tax=S... 148 2e-34 UniRef50_B8IWN2 Transcriptional regulator, AraC family n=1 Tax=M... 148 2e-34 UniRef50_A3WIM7 Probable transcriptional regulator n=1 Tax=Idiom... 148 2e-34 UniRef50_A1SHQ2 Transcriptional regulator, AraC family n=1 Tax=N... 148 3e-34 UniRef50_D1UN50 Transcriptional regulator, AraC family n=3 Tax=P... 148 3e-34 UniRef50_A6GGU5 Transcriptional regulator, AraC family protein n... 148 3e-34 UniRef50_UPI0001B55AC3 AraC family transcriptional regulator n=1... 148 3e-34 UniRef50_A6B9E2 Transcriptional regulator, AraC family n=5 Tax=G... 148 4e-34 UniRef50_Q0FPK9 Transcriptional regulator, AraC family protein n... 147 4e-34 UniRef50_Q6W1W1 Probable AraC family transcriptional regulatory ... 147 5e-34 UniRef50_C4RJP1 AraC family transcriptional regulator n=1 Tax=Mi... 147 5e-34 UniRef50_A5V473 Helix-turn-helix-domain containing protein, AraC... 147 6e-34 UniRef50_A1WI21 Transcriptional regulator, AraC family n=1 Tax=V... 147 6e-34 UniRef50_Q3A5L7 Transcriptional regulator, AraC family n=12 Tax=... 147 7e-34 UniRef50_C9YUR8 Putative transcriptional regulator n=1 Tax=Strep... 147 7e-34 UniRef50_A0QJX7 Transcriptional regulator, AraC family protein n... 147 8e-34 UniRef50_C9N369 Transcriptional regulator, AraC family n=1 Tax=S... 147 8e-34 UniRef50_A0NVI5 Transcriptional Regulator, AraC family protein n... 146 9e-34 UniRef50_C6WIT0 Transcriptional regulator, AraC family n=2 Tax=A... 146 1e-33 UniRef50_B2IIE7 Transcriptional regulator, AraC family n=1 Tax=B... 146 1e-33 UniRef50_B9QYF5 Putative uncharacterized protein n=1 Tax=Labrenz... 146 1e-33 UniRef50_B0T4V7 Transcriptional regulator, AraC family n=2 Tax=C... 146 1e-33 UniRef50_C3X2I3 Transcriptional regulator n=1 Tax=Oxalobacter fo... 146 1e-33 UniRef50_A6GLD5 Transcriptional regulator, AraC family protein n... 146 2e-33 UniRef50_B2J894 Transcriptional regulator, AraC family n=6 Tax=B... 145 2e-33 UniRef50_A6F2M7 Transcriptional regulator, AraC family protein n... 145 2e-33 UniRef50_B9BG93 Transcriptional activator FeaR n=1 Tax=Burkholde... 145 2e-33 UniRef50_B8DKQ8 Transcriptional regulator, AraC family n=2 Tax=D... 145 2e-33 UniRef50_A1B7B0 Transcriptional regulator, AraC family n=9 Tax=A... 145 2e-33 UniRef50_Q880S7 Transcriptional regulator, AraC family n=2 Tax=P... 145 2e-33 UniRef50_B1Q2A8 Transcriptional activator for nphA1A2 n=4 Tax=No... 145 3e-33 UniRef50_B4WDX1 AraC-type transcriptional regulator N-terminus d... 145 3e-33 UniRef50_A6UG08 AraC-type transcriptional regulator domain prote... 145 3e-33 UniRef50_Q5YXZ9 Putative transcriptional regulator n=1 Tax=Nocar... 145 3e-33 UniRef50_Q08YF3 Transcriptional regulator, AraC family n=1 Tax=S... 144 3e-33 Sequences not found previously or not previously below threshold: UniRef50_B1Z4N2 Transcriptional regulator, AraC family n=6 Tax=B... 154 4e-36 UniRef50_A4Q9T5 Putative uncharacterized protein n=1 Tax=Coryneb... 145 3e-33 >UniRef50_P36547 HTH-type transcriptional regulator eutR n=115 Tax=Bacteria RepID=EUTR_ECOLI Length = 350 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 350/350 (100%), Positives = 350/350 (100%) Query: 1 MKKTRTANLHHLYHEPLPENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPG 60 MKKTRTANLHHLYHEPLPENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPG Sbjct: 1 MKKTRTANLHHLYHEPLPENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPG 60 Query: 61 KFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEI 120 KFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEI Sbjct: 61 KFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEI 120 Query: 121 ATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKA 180 ATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKA Sbjct: 121 ATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKA 180 Query: 181 ALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRR 240 ALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRR Sbjct: 181 ALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRR 240 Query: 241 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE 300 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE Sbjct: 241 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE 300 Query: 301 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG Sbjct: 301 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 >UniRef50_A6VSI6 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VSI6_MARMS Length = 324 Score = 277 bits (708), Expect = 6e-73, Method: Composition-based stats. Identities = 122/327 (37%), Positives = 175/327 (53%), Gaps = 14/327 (4%) Query: 20 NLKLTPK----VEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQ 75 NLK PK + V + D HA +T WQQ YDQ+ G F+G E+ D +Q Sbjct: 4 NLKNAPKEGFPPRISKVRLSEAHDADLHASNLTNWQQEYDQISRGSFYGRIVELPFDGLQ 63 Query: 76 VFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPD 135 VF E+T AL+Q C+VWP+S W GIP E+ I + I RPG +F+LSTP Sbjct: 64 VFCEHTSQALQQKCVVWPDSVWLGIPLVDQEESRINGLTINPNNIMCRPGDCDFQLSTPQ 123 Query: 136 DYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCE 195 DY + G+V+ + + A +H D L L V ++ V+ LA Sbjct: 124 DYDLYGLVVDRSKLIKMAA-IHGVDLNWKELTECGRLGVPDKTLEE----VRFVLARLLS 178 Query: 196 NPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSE 255 N P +++ D ++MA+ +L+ P A++ S+ ++++ AR+++ ++ E Sbjct: 179 VQNNTTPPRLQQ---DIVMMALLEVLKVETPQP-AKTQSYYHRKKVVDCARQFLDYHLDE 234 Query: 256 PVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAA 315 PVTV LC +VSRRTLQ +F +ILG+ P +L+ RLN VRR L+ V D A Sbjct: 235 PVTVTQLCEITNVSRRTLQYSFESILGVSPIQYLRISRLNGVRRSLVQAK-DGQAVSDIA 293 Query: 316 MQWGFWHLGQFATDYQQLFSEKPSLTL 342 QWGFWHL QFA DY+ LF E+PS TL Sbjct: 294 AQWGFWHLSQFAKDYKLLFGEQPSQTL 320 >UniRef50_Q5P0V5 Transcriptional regulator, AraC family, n=3 Tax=Rhodocyclaceae RepID=Q5P0V5_AZOSE Length = 343 Score = 267 bits (683), Expect = 4e-70, Method: Composition-based stats. Identities = 101/312 (32%), Positives = 152/312 (48%), Gaps = 2/312 (0%) Query: 32 VHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLV 91 V Q T D +HA + W+Q YDQL G F G+F E ++QVFRE T + + Sbjct: 23 VVQLDTRDADDHASCLQHWRQRYDQLSAGLFSGKFEEFWFGNVQVFRERTNQVIHEIGSA 82 Query: 92 WPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITR 151 W S G+P G+ + G + T GG + + TP + ++ V + Sbjct: 83 WEGSRTVGVPVALDGTGWYCGEACGVDSLITLRGGDDLDYRTPRVHDVVAVTTDTQAFSD 142 Query: 152 QANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGD 211 A + + D + + N+ + + L F+ +++ PE L P +RK L Sbjct: 143 YATQVEHRD-IEAEIGNRRVIAATPEQATTLRSFLLTVISSLEATPELLRHPQMRKGLEQ 201 Query: 212 NLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRR 271 + ++ + S + + ++ RAREY+ ++ EP+TV DLC +L VSRR Sbjct: 202 AIYASLLTAI-NGSLDAARASTPGRGRQLIVDRAREYMSAHIDEPITVADLCTELEVSRR 260 Query: 272 TLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQ 331 TLQ +F IL + P ++L+ +RLN VRR L S V D A QWGFWHL FA DY+ Sbjct: 261 TLQYSFQDILNLNPVSFLRALRLNGVRRALKSAEHGHAAVADIAAQWGFWHLSHFAADYR 320 Query: 332 QLFSEKPSLTLH 343 +F E PS TL Sbjct: 321 TMFGELPSETLR 332 >UniRef50_Q1N3C0 HTH-type transcriptional regulator eutR n=1 Tax=Bermanella marisrubri RepID=Q1N3C0_9GAMM Length = 321 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 102/315 (32%), Positives = 156/315 (49%), Gaps = 12/315 (3%) Query: 27 VEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALR 86 + D EHA +T WQQ YDQ+ PG F G E+ L+ IQVF+E+T ++ Sbjct: 11 SRCGKIRHITAHDADEHAHNLTNWQQEYDQVSPGAFEGSIKELQLNGIQVFKEFTSQSVF 70 Query: 87 QSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSE 146 Q C VW +S W G+P ++ EQ I L S ++ RPG +F L TP + I G+V+ + Sbjct: 71 QKCNVWSDSLWIGLPESKPEQSRINGHHLQSHQVMCRPGDIDFSLMTPSQFNIFGIVIDQ 130 Query: 147 DVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVR 206 +++ + ++ + + KA + + L +P + Sbjct: 131 SLLSNIEDSDYSSAQQFSLSEC-------ISLKAKTYNNLHYLLQRLLMHP----HDGIP 179 Query: 207 KVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQL 266 + + +LL+ + + + S + +++ Y+ ++ EPVTV +LC Sbjct: 180 EKVCHDLLLLALHDVLTPESVNCLPPTSLKRRNQIVDLTLHYLKQHHDEPVTVTELCTLA 239 Query: 267 HVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQF 326 VSRRTLQ +F ++LGI P +L+ RLN RR L Q + D A QWGFWHL QF Sbjct: 240 CVSRRTLQYSFESVLGISPAHFLRISRLNGARRSLRQATEQDC-IADVAAQWGFWHLSQF 298 Query: 327 ATDYQQLFSEKPSLT 341 A DY+QLF E PS T Sbjct: 299 AKDYKQLFGELPSET 313 >UniRef50_A1VQJ8 Transcriptional regulator, AraC family n=4 Tax=Burkholderiales RepID=A1VQJ8_POLNA Length = 347 Score = 256 bits (654), Expect = 9e-67, Method: Composition-based stats. Identities = 124/328 (37%), Positives = 179/328 (54%), Gaps = 10/328 (3%) Query: 26 KVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLAL 85 + E + + Q D +HA +TAW+Q YDQ+ G FHG TE+ + +QVF E+T A+ Sbjct: 22 QGESPRIRKVQAHDADDHARNLTAWEQRYDQVTRGPFHGTLTELRMPAMQVFMEHTSQAV 81 Query: 86 RQSCLVWPNSFWFGIPATRGEQG-------FIGSQCLGSAEIATRPGGTEFELSTPDDYT 138 RQSC VWP++FWFG+P G I + + I RPG EFEL TP DY Sbjct: 82 RQSCCVWPDAFWFGVPGGANTAGERSGMNARINGRLGDADTIMVRPGNREFELLTPADYA 141 Query: 139 ILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPE 198 I G+V+ D + A+ L + R + L V E + A + + + + Sbjct: 142 IYGIVIKRDSLLVTASQLGCRIDWAQLERAE-VLHVAESARLACQQTLARLI--LQGRAD 198 Query: 199 NLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVT 258 + QP + +M + +A + +A S S +R+++RAR+YVL + + VT Sbjct: 199 SEGQPVASVACAEQAVMLAVLSMLDASEVDSAVSNSFMRRQRIVARARDYVLGHRDQLVT 258 Query: 259 VLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQW 318 V +LC +LHVSRRTLQ F +L I P +L+ IRLN RREL S + TV+D A W Sbjct: 259 VPELCERLHVSRRTLQYCFEDVLAISPIQYLRLIRLNGARRELRERCSDARTVRDIAADW 318 Query: 319 GFWHLGQFATDYQQLFSEKPSLTLHQRM 346 GFWH QF++DY++LF + PS +L QRM Sbjct: 319 GFWHFSQFSSDYRKLFGQSPSESLRQRM 346 >UniRef50_Q1H3X2 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria RepID=Q1H3X2_METFK Length = 339 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 88/330 (26%), Positives = 146/330 (44%), Gaps = 4/330 (1%) Query: 19 ENLKLTPKVEVDNVH--QRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQV 76 + + P +H +R T+DV E A + W Q Y QL G F G T + D +Q+ Sbjct: 6 DFMGNAP-GACPFLHLVERSTSDVLEQAEALPFWSQDYTQLSKGAFSGSVTSVSCDGLQI 64 Query: 77 FREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDD 136 F E A+ Q +S+ G+P + G + + + T E T + Sbjct: 65 FTETMNQAVDQIASAPVDSYVMGLPTLVDGESTWGLLPITTNSLITLEKNAELYFKTSNI 124 Query: 137 YTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCEN 196 I V+ + A + D M + + L +Q + + Sbjct: 125 SEITAAVIPAQRLETYAAEVEWIDLSKVMEGLKPVEMLHPDIAQQLLSALQGGIQYKADI 184 Query: 197 PENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEP 256 +N+H + + D+LL L + + + R L++R R+Y L N + P Sbjct: 185 ADNIHAHQMWRNFEDDLLSTCLHTLLHVRGNIH-PHFDQRLPRYLVNRVRDYTLSNSALP 243 Query: 257 VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAM 316 +T+ +LC L VSRRTL +AF +LGI P A+++ +RL+ VR E+ + +++ A Sbjct: 244 LTIGELCKSLRVSRRTLNHAFIRVLGITPVAYIRNLRLHRVRFEMQQSPHEVISIAHLAT 303 Query: 317 QWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 +WGFWHL F+ Y++LF E P TL + Sbjct: 304 KWGFWHLSLFSRYYRELFGECPIDTLQRAR 333 >UniRef50_B7KJD4 Transcriptional regulator, AraC family n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KJD4_CYAP7 Length = 319 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 75/311 (24%), Positives = 138/311 (44%), Gaps = 2/311 (0%) Query: 32 VHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLV 91 + + DV E W + Y QL G L IQ + + L+LR Sbjct: 6 IDSIECHDVDELTEAARHWTEEYLQLGTGSLKTLIDIAQLGGIQFVSQLSNLSLRACGQT 65 Query: 92 WPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITR 151 P + GIP + + + ++A E L+ + L + + ++ + + Sbjct: 66 PPKTISIGIPVNCEDHLVWYGRIIPPGQVALAYSCVENYLTFLGETKFLIISVDQETLLK 125 Query: 152 QANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGD 211 +A + + + + + AA+ ++Q +PE + ++ ++ Sbjct: 126 EAEAMGRTEIISFLEGKYHLIYPDPVALAAIKNYLQDLWQLVKISPEQAIEIRMQNLIHR 185 Query: 212 NLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRR 271 + + + + +S L+ +A E++ +N+ +P+T+ DL L VS R Sbjct: 186 DFIPLFLNLFPCDKGQN--PKVSFSKRYILVRKAEEFIKDNLHDPLTLQDLYEHLQVSER 243 Query: 272 TLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQ 331 TL+ +F LG+ P +LK+ RLN VRREL + + + + A +WGFWH+GQF+ DY+ Sbjct: 244 TLRYSFQDCLGVSPMTYLKKQRLNGVRRELKASYGTPVKINQIAARWGFWHMGQFSQDYK 303 Query: 332 QLFSEKPSLTL 342 +LF E PS TL Sbjct: 304 KLFGEFPSQTL 314 >UniRef50_C6WX32 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria RepID=C6WX32_METML Length = 339 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 87/330 (26%), Positives = 146/330 (44%), Gaps = 3/330 (0%) Query: 19 ENLKLTPKVEVDNVH--QRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQV 76 E L ++P +H +R+TTDV E A + W Q Y QL G F G + + +QV Sbjct: 6 EFLGISPTGGSPKIHLVERKTTDVLEQADALPFWSQDYTQLSKGTFSGGLSSVTHHGVQV 65 Query: 77 FREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDD 136 FRE A+ Q +++ G+P G + + T E T + Sbjct: 66 FRETMNRAVDQIAFAPADAYVIGLPTIIEGDASWGLMPVKPNAMITLDKNAELVFRTSNL 125 Query: 137 YTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCEN 196 I V+S + A + D M + + A L + + + Sbjct: 126 SEITAAVISAQRLEEYAAQVEWIDLRKAMESVKPVERISPDVTARLQASLTDGMHYVSKF 185 Query: 197 PENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEP 256 + + ++ ++L+ L +A S H+ +R +++R R+ L + P Sbjct: 186 RDTEDAEQIWRLFENDLMATCLQALLQA-SNSPNHSHDHRIHRYIVNRVRDLTLSSSGYP 244 Query: 257 VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAM 316 +T+ +LC L +SRRTL +AF +LGI P A+++ +RL+ +R EL S Q + A Sbjct: 245 LTIEELCISLRISRRTLNHAFIRVLGITPVAYMRNVRLHRIRAELQSAPHQVRYIASVAA 304 Query: 317 QWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 +WGFWH+ F+ Y++LF E P TL + Sbjct: 305 KWGFWHMSLFSRYYRELFGETPIETLSRSR 334 >UniRef50_B9Z415 Transcriptional regulator, AraC family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z415_9NEIS Length = 316 Score = 246 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 88/313 (28%), Positives = 151/313 (48%), Gaps = 3/313 (0%) Query: 34 QRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWP 93 R D +HA + W Q+YDQL G+F + ++ +FRE + Q Sbjct: 5 ARCFDDAQQHAAALPYWNQVYDQLTAGRFQSSLERAHVGNLVLFREVLNQRVVQHGQTPA 64 Query: 94 NSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQA 153 + IP G + + + I G EF P + + V ++ + + A Sbjct: 65 DMLHVSIPLAMPNAGSLQGCPVNANSIMALHGNEEFVFHLPPNVDSIQVSITYEDLDTLA 124 Query: 154 NFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNL 213 +R+ Q + ++E H A + + A +NP+ L +K++ Sbjct: 125 PQF--AERLARTRNRQPVIPLREGHLAGIRATLPGAFEQVVQNPDLLEFTGTQKIIKHQF 182 Query: 214 LMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTL 273 + + +L + P ++++ ++ ++ R++ VL + EPVTVL+LC +L +SRRTL Sbjct: 183 MSLLLELLNDVAPDE-RYNLTYATHSDIVKRSQAIVLASPDEPVTVLELCQKLRISRRTL 241 Query: 274 QNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQL 333 QN+F I P +L+ IRLNAVRR L S + ++++AA WGF+HLG F+ DY++L Sbjct: 242 QNSFQLIADTTPVDYLRSIRLNAVRRMLQSGSPECTSIREAAGYWGFYHLGHFSRDYRRL 301 Query: 334 FSEKPSLTLHQRM 346 F E PS T + + Sbjct: 302 FDELPSETRARAL 314 >UniRef50_Q87WL8 Transcriptional regulator, AraC family n=5 Tax=Proteobacteria RepID=Q87WL8_PSESM Length = 373 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 95/329 (28%), Positives = 159/329 (48%), Gaps = 11/329 (3%) Query: 20 NLKLTPKV----EVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQ 75 N+ + P + ++ + QT D+ EH ++ WQ YDQ+ PG F GE TE D +Q Sbjct: 48 NMAINPASNQAAALPHLGRFQTCDIDEHGRNLSGWQVRYDQVTPGGFEGELTEFRSDWLQ 107 Query: 76 VFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPD 135 + R+ + AL +S + W + F +P + F L + G ELSTP Sbjct: 108 LVRDRSNQALVKSGMAWKGAIIFALPLSANGPAFCAGHTLQEPSLIVAHGENLPELSTPL 167 Query: 136 DYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCE 195 LGV + E + + + + + + L Sbjct: 168 QLDALGVAIEEGALAHALERQGSRFEITDLPKCYRL--ADPTVRTRFAALFDNLLNGEQA 225 Query: 196 NPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSE 255 + L ++R+ + D +++ + ++ A ++ + ++++ RAR+Y L ++ E Sbjct: 226 CLQKLEYDSIRRGIRDAVMLQVLELVA----PDEAPPLNPTARKKMVDRARDYALAHLDE 281 Query: 256 PVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAA 315 P+++LD+CN + SRR LQ F LGI P A+L+ +RLNA RREL S+ V+ A Sbjct: 282 PLSILDVCNHIGTSRRKLQYCFQETLGINPVAFLRTLRLNAARRELRE-SSRVELVQTVA 340 Query: 316 MQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 +WGFWHL +F++DY+ LF E PS TL + Sbjct: 341 ARWGFWHLSRFSSDYRTLFGETPSQTLQR 369 >UniRef50_Q5P5Q4 Probable regulatory protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5Q4_AZOSE Length = 342 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 93/321 (28%), Positives = 149/321 (46%), Gaps = 2/321 (0%) Query: 24 TPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGL 83 TP+ + + T D +HA ++ W Q Y QL G F GE EI + IQVF+E Sbjct: 11 TPRRRNERISIISTDDPCQHAASLRDWSQDYLQLSKGAFSGEIVEISVGPIQVFKETIYQ 70 Query: 84 ALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVV 143 + + NS+ G+P + E G+ + L + T E TP + TIL V Sbjct: 71 CVDEKANPRCNSYTVGVPVSVTENGYWQGRHLERDSLITLRPNEELHFRTPRESTILVTV 130 Query: 144 LSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQP 203 + D V ++ +A + + + LA+ PE Sbjct: 131 IDCTAFDAFVRDTAGVD-VSRLIAPSNAAGLPADVAQSYRVTLGTVLASVAATPEIFEHQ 189 Query: 204 AVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLC 263 A K + + ++ A L+ P+ + +H R ++ RAR Y++ N P TV +L Sbjct: 190 ASAKSVAETVMSASRNALQAKSPLNESPRTTHAVQRAIVERARSYIVVNRENPPTVAELS 249 Query: 264 NQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHL 323 + L +SRR L +AF +LGI +L+ +RL+ VR+EL+ +V A +WGFWH+ Sbjct: 250 SYLKMSRRGLHHAFVNVLGINVATFLRYVRLHGVRKELLRAGPTD-SVSSIACKWGFWHM 308 Query: 324 GQFATDYQQLFSEKPSLTLHQ 344 G F++ Y+ LF E PS T+ + Sbjct: 309 GMFSSYYKSLFGETPSTTMRK 329 >UniRef50_A9AKQ9 AraC family transcriptional regulator n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9AKQ9_BURM1 Length = 321 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 87/315 (27%), Positives = 139/315 (44%), Gaps = 6/315 (1%) Query: 32 VHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLV 91 + D+ + + ++Q YDQL PG F G EI L + VFRE + RQ Sbjct: 6 WSDFHSDDIDGLSEHLRSFQWRYDQLDPGTFLGRIAEIDLPGVTVFREQLSRSTRQVGTT 65 Query: 92 WPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITR 151 P + +P + + + + + E E T + V++ D I Sbjct: 66 PPGTLGLALPWNQSGEIWANGVRMTEGYVGV-SAYAEVEFFTASESDFAYVLIDSDAIDH 124 Query: 152 QANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGD 211 A + + + + E K AL A PE LH R++L D Sbjct: 125 AAART-GVALPRDLRDSATIALLPEGAKLALRQLFAVAHGRLGAPPETLHSDVARRLLAD 183 Query: 212 NLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRR 271 ++ + S R++ RARE + + +P+++LD+C Q+ VSRR Sbjct: 184 QFVLEFIEVFSSGISATER---SVAFRTRMVKRAREVMHGHTEDPLSILDVCKQVGVSRR 240 Query: 272 TLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQ 331 L F +LG P A+++ IRLN RRE++ ++ +V + A +WGFWH G+FATDY+ Sbjct: 241 KLNYCFQDVLGTTPLAYMRAIRLNGARREML-ACARGDSVSEIAGKWGFWHFGRFATDYK 299 Query: 332 QLFSEKPSLTLHQRM 346 + F E PS TL + Sbjct: 300 RHFGELPSQTLQRGR 314 >UniRef50_A0B2C1 Transcriptional regulator, AraC family n=17 Tax=Burkholderia RepID=A0B2C1_BURCH Length = 320 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 83/318 (26%), Positives = 145/318 (45%), Gaps = 3/318 (0%) Query: 32 VHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLV 91 V ++ D HA + W Q YDQ+ G + +LD +Q+F+E + + Q + Sbjct: 3 VLHQRFDDADRHAEALRGWNQRYDQIGSGAYRSAVKHAVLDGVQLFQETANVRIIQRGCL 62 Query: 92 WPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITR 151 FG+P T G + I GG FEL +PDD +++GVV+ +++ + Sbjct: 63 PHGHTVFGMPLTGSGTFAFGGARIERGTIVMARGGIPFELHSPDDMSLIGVVVEPELMQQ 122 Query: 152 QANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGD 211 + R+ +EV + + L P+ + + Sbjct: 123 IEDAADV--RLDARALRHGVVEVPVAARERASVQLATLLERVLSAPDTFDAARAQCAIRA 180 Query: 212 NLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRR 271 ++ + +L P + ++H + ++ R +YV+E+ PV +L LC QL VSRR Sbjct: 181 DVGNVLVDLLTYRMPEP-SNRLTHACHADIVRRVHDYVIEHPEAPVDILSLCTQLRVSRR 239 Query: 272 TLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQ 331 T+QN+F +++ P + + +RL VRR L+ + + +AA +WGF HLG FA+ Y+ Sbjct: 240 TMQNSFQSVVQTSPLNYTRSLRLAQVRRLLLDTRQSDLPISEAAARWGFLHLGHFASVYK 299 Query: 332 QLFSEKPSLTLHQRMREW 349 F E PS T + + Sbjct: 300 AQFGELPSATARRTVHRA 317 >UniRef50_A6W073 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W073_MARMS Length = 322 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 87/327 (26%), Positives = 164/327 (50%), Gaps = 12/327 (3%) Query: 21 LKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREY 80 ++ P+ + ++T D+ EHA ++ W+ YDQ+ G+F G TE+ L +Q+ R+ Sbjct: 7 FEIQPQSPLS---FKETIDIEEHAGNMSGWKVRYDQISAGQFAGSITELNLTGMQLIRDK 63 Query: 81 TGLALRQSCLVWPNSFWFGIPAT-RGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTI 139 + A+ +S P++ F +P E + + + EL TP + + Sbjct: 64 SNQAIIKSGESIPDTIMFTLPLAPAAENLYCEGHIFTPSNLLVSNWRNLPELKTPANLDV 123 Query: 140 LGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPEN 199 + + S+D++ + + +L + + ++ + + + + T Sbjct: 124 ICINASQDLLQNALDRQ---NIILDLSDSAHCYQLDKIGNQDELLTLLKTVMTPNNLQPL 180 Query: 200 LHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTV 259 L A+RK + D LL + ++ E + + ++ + +R++ +AR+YVL N+++ ++ Sbjct: 181 LEHEAIRKGIRDTLLQNLLELINEEE----VQYLTSLARKRIVDKARDYVLANINDNPSI 236 Query: 260 LDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWG 319 +DLCN + SRR LQ F LGI P +L+ IRLN+ REL+ V++ A +WG Sbjct: 237 VDLCNAVGASRRKLQYCFQETLGINPVTYLRTIRLNSAHRELLMQDGTKQ-VQNIAAKWG 295 Query: 320 FWHLGQFATDYQQLFSEKPSLTLHQRM 346 F HL +FA DY+QLF E PS T+ ++ Sbjct: 296 FLHLSRFANDYKQLFGELPSDTIKRKQ 322 >UniRef50_A0B1I5 Transcriptional regulator, AraC family n=25 Tax=Burkholderia RepID=A0B1I5_BURCH Length = 332 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 99/312 (31%), Positives = 148/312 (47%), Gaps = 4/312 (1%) Query: 32 VHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLV 91 R DV++H L I W Q+Y Q+ PG+F G T++L DD FRE T + Q+ L Sbjct: 23 FQSRSHEDVHDHGLAIAGWHQVYRQMTPGRFKGTVTQVLYDDFHFFRETTNRRVAQTGLA 82 Query: 92 WPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITR 151 +P + G Q + + G +FE TP+ ++G+ S D++ Sbjct: 83 PAGRTSLAVPLSVPLAGTFQGQPVDGYALLALRAGEDFEFHTPEGMGLVGISASSDMVDE 142 Query: 152 QANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGD 211 + + + + AL + + NP L A RK+ D Sbjct: 143 LCEAEFGAAGARRL---RHVTRLSDAQGVALGVRLSALIDDAQRNPGCLEYAATRKMFRD 199 Query: 212 NLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRR 271 +L LE+ V I+H +Y ++SR +++ + EPVTVL+LC L SRR Sbjct: 200 AMLGMFLDALEQG-IGVERRDITHATYSDIVSRCEKHLRDRPEEPVTVLELCRALRCSRR 258 Query: 272 TLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQ 331 TLQ +F + + P +L+ IRLNAVRR L + +Q + V +AA WGF HLG FA +Y+ Sbjct: 259 TLQTSFQRVADVTPVGYLRTIRLNAVRRLLRTTSAQQLGVGEAAASWGFTHLGYFAREYR 318 Query: 332 QLFSEKPSLTLH 343 LF E PS T Sbjct: 319 DLFGELPSQTTR 330 >UniRef50_B1Z491 Transcriptional regulator, AraC family n=6 Tax=Burkholderia cepacia complex RepID=B1Z491_BURA4 Length = 342 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 97/330 (29%), Positives = 138/330 (41%), Gaps = 7/330 (2%) Query: 22 KLTPKVEVDNV-HQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREY 80 ++ P + + DV HA W DQL PG F G EI D +Q+ RE Sbjct: 16 QVDPTLGATLFNRRFTCNDVDSHAECTHGWSIRLDQLSPGPFQGTLHEIRFDGMQLLRER 75 Query: 81 TGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTIL 140 AL + S F IP G+ G L + G + EL TPD ++ Sbjct: 76 VNRALLKRGDQRAGSTSFSIPLETAGAGYCGGTPLRDKALLVSGGTSLPELRTPDHQDVV 135 Query: 141 GVVLSEDVITRQA---NFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENP 197 + + D + A + + D + S + V AL + + Sbjct: 136 LLTVPTDTLRTLAWLADEDDDGDCTGTLSNETSIVRVPAARYDALTSLLVAGFDAVDTSE 195 Query: 198 ENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPV 257 P RK L D +L+ + LE A V + + + + + P+ Sbjct: 196 RPFALPQARKTLRDAILVELVDALEAAGRPVRLDPSARRRVVERVRELV---VSQPDAPL 252 Query: 258 TVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQ 317 TVLD+C + SRR LQ F ILG P +L+ +RLN VRREL S +V D A + Sbjct: 253 TVLDVCRAVGASRRKLQYCFEEILGTHPAWYLRVLRLNGVRRELREQSPSSASVSDVACR 312 Query: 318 WGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 WGFWHL +FA Y++LF E PS TL + R Sbjct: 313 WGFWHLSRFAAHYRELFGELPSDTLKRPPR 342 >UniRef50_A7JZD1 Ethanolamine operon regulatory protein n=3 Tax=Vibrio RepID=A7JZD1_VIBSE Length = 354 Score = 230 bits (587), Expect = 6e-59, Method: Composition-based stats. Identities = 90/318 (28%), Positives = 148/318 (46%), Gaps = 14/318 (4%) Query: 27 VEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALR 86 + T D + A ++ WQQ YDQL G+F G+ E + VFRE + +LR Sbjct: 45 QTAPMLCIHHTKDANQQAASLINWQQEYDQLSDGRFLGQIRERRFPNFHVFREDSNRSLR 104 Query: 87 QSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSE 146 Q C V W G+ A + + ++++ R GG +FEL TP+ ++I G+VL Sbjct: 105 QQCRVEEGGIWLGLSAE-NKPLHLNHSQFNASQLLLRQGGADFELMTPEQFSIYGIVLDR 163 Query: 147 DVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVR 206 ++ L + + N L + ++ L T E+ + Sbjct: 164 KLVQIIEKQL----ELDGIGCNTPHLAGPTEKH---IQQLKFYLGTLLGPTESRWSDSTH 216 Query: 207 KVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLE-NMSEPVTVLDLCNQ 265 +V+ L + L + IS + ++ R ++ + + + P+TV +LC+ Sbjct: 217 QVV----LKDIVLELFSISSPSASHPISISHRQHVMRRIKQQLHDLDYRTPITVSELCDA 272 Query: 266 LHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQ 325 +HVSRRTLQ F P ++ R+RLN VRR L SP + T+ + A +GF+HLGQ Sbjct: 273 VHVSRRTLQYTFEHCCNTSPKQFIHRMRLNQVRRVLQSPE-DNRTIAEIAFDFGFFHLGQ 331 Query: 326 FATDYQQLFSEKPSLTLH 343 F+ Y++LF E P+ T Sbjct: 332 FSQSYKRLFGETPTETRK 349 >UniRef50_C4KY56 Ethanolamine operon transcriptional activator EutR n=52 Tax=Burkholderia RepID=C4KY56_BURPS Length = 342 Score = 230 bits (587), Expect = 6e-59, Method: Composition-based stats. Identities = 115/311 (36%), Positives = 163/311 (52%), Gaps = 5/311 (1%) Query: 37 TTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSF 96 D E A + W+Q YDQL G+F G TE+ LD ++VFRE T LRQ+C V +++ Sbjct: 34 AHDADEQARNLIGWRQTYDQLAAGRFVGTLTELPLDTMKVFRETTSHTLRQACEVRGDAY 93 Query: 97 WFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFL 156 WFGIP R I ++ + + +A RPG EFEL TP ++I GVV+ V+ R A + Sbjct: 94 WFGIPLARDGAARIDARPIAADALAFRPGNVEFELLTPAQFSIYGVVVRGAVLRRYAQEV 153 Query: 157 HNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMA 216 + L + V E L + Q L + +P D Sbjct: 154 ERCG-LDERLPLVPVVRVGEARLTRLCALLAQRLDD-ADAMSAAGEPLSDCARNDLQAEV 211 Query: 217 MGAMLEEAQPMVTAESISHQSYRR-LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQN 275 + A+ + S+ H S RR +++ AR+YVL + S PV V +LC QLHVSRRTLQ Sbjct: 212 LAALFDLCASPAADASVEHSSRRRKIVAAARDYVLAHRSRPVGVPELCEQLHVSRRTLQY 271 Query: 276 AFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFS 335 F +LG+ P +L+ +RLN VRR+L + S+ WGFWHL QFATDY+++F Sbjct: 272 CFQDVLGMAPATYLRALRLNGVRRDLRGRAAASVQDAA--AAWGFWHLSQFATDYRRMFG 329 Query: 336 EKPSLTLHQRM 346 +PS TL + Sbjct: 330 ARPSETLRDAL 340 >UniRef50_C4I2G6 Transcriptional regulator, AraC family n=26 Tax=Burkholderia RepID=C4I2G6_BURPS Length = 344 Score = 229 bits (585), Expect = 8e-59, Method: Composition-based stats. Identities = 99/330 (30%), Positives = 146/330 (44%), Gaps = 8/330 (2%) Query: 18 PENLKLTPK----VEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDD 73 P L P R DV++H L I W+Q+Y Q+ PG+F G T++L DD Sbjct: 17 PRVLAAAPHRHSLEASMLFQSRSLEDVHDHGLAIAGWRQVYRQMTPGRFRGTVTQVLYDD 76 Query: 74 IQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELST 133 FRE T + Q+ + +P G Q + + G +FE T Sbjct: 77 FHFFRETTNRRVAQTGVSPEGRTSLAVPLLAPLSGTFQRQHVDGYALLALRPGEDFEFHT 136 Query: 134 PDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATF 193 P+ ++G+ + D+I + + + AAL + + Sbjct: 137 PEGMRLVGISAAPDMIEELCEAEFGTRGHRAP---RHVTRLTHEQGAALGARLSSYIDDA 193 Query: 194 CENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENM 253 NP L RK+ D +L L A I+H +Y ++ R Y+ Sbjct: 194 QRNPTWLAYDGTRKMFRDAMLGVFLDALSGAVG-EERRDITHATYSDIVGRCERYLRARP 252 Query: 254 SEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKD 313 EPVTVL+LC L SRRTLQ +F + + P +L+ IRLNAVRR L + + ++ V + Sbjct: 253 EEPVTVLELCRALRCSRRTLQTSFQRVADVTPVTYLRTIRLNAVRRLLRTTSADALCVGE 312 Query: 314 AAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 AA +WGF HLG FA +Y+ LF E PS T Sbjct: 313 AAARWGFTHLGYFAREYRGLFGELPSQTRR 342 >UniRef50_D1T8Q5 AraC family transcriptional regulator n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T8Q5_9BURK Length = 312 Score = 229 bits (585), Expect = 9e-59, Method: Composition-based stats. Identities = 76/313 (24%), Positives = 129/313 (41%), Gaps = 3/313 (0%) Query: 32 VHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLV 91 + TD EHA + W+Q Y QL G F G +I +D +F E + Q Sbjct: 3 LENHTFTDAGEHAAMLPGWEQQYFQLDCGPFQGRLQQIGVDGTHLFYESVNRRVVQQGST 62 Query: 92 WPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITR 151 + FGI + + + + EF L P + +L V + + Sbjct: 63 PSDMLVFGIVLDANSPVTFADRSVPADSMICARASREFFLHFPGETALLAVGVKLPFLAG 122 Query: 152 QANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGD 211 + + + +A + ++ + Sbjct: 123 HPE--LAARLESRLSNKTCVIPLAPGARAQFIAMWRYVTDEALALNACAPSELAQRRVSA 180 Query: 212 NLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRR 271 +L + A++++ P + I+ S +++RA + +L EPVTV +LC L +SRR Sbjct: 181 QILDMLDALVDDGVPDEKTD-ITWMSQSDVVARAHDMILARPMEPVTVQELCESLRISRR 239 Query: 272 TLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQ 331 T+Q +F + G P +++ IRLN VR+ L S +TV+ AA +WGF+H G F DY+ Sbjct: 240 TVQTSFRLVTGKSPVEYMRAIRLNHVRQLLRKSSSGELTVRAAAQRWGFFHSGHFTQDYR 299 Query: 332 QLFSEKPSLTLHQ 344 +LF PS + Sbjct: 300 ELFEAMPSDNRPR 312 >UniRef50_A0Y3G2 Transcriptional regulator, AraC family protein n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0Y3G2_9GAMM Length = 319 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 102/331 (30%), Positives = 152/331 (45%), Gaps = 16/331 (4%) Query: 19 ENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFR 78 ++L P+ + T D+ E A + WQQ YDQ+ G F G + +I VF Sbjct: 4 QHLSNAPQK-----SKVDTHDIDEQASNLINWQQKYDQVSEGGFFGCIEGVAHSNIHVFE 58 Query: 79 EYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYT 138 EYT ALRQ C++ NS W GIP T + I + S + R ++FEL TP+ + Sbjct: 59 EYTERALRQQCVIADNSIWLGIPKT-SCESKINGLDVLSNQFMCRSSHSDFELITPEKFN 117 Query: 139 ILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPE 198 I GVV++ I A L + L V + + Sbjct: 118 IYGVVINWQSIECMA-QLQGINLQNMNAFGAERLTVNNPTLNRARSIINSMV-------- 168 Query: 199 NLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVT 258 N + L +L + L + + + + S++ + ++ + + ++ + VT Sbjct: 169 NHDAHGLNANLQQEMLYMLALNLLKTESQQHSIAPSYKHRKAVVDKVKAHIKVDPQSTVT 228 Query: 259 VLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQW 318 + LC HVSRRTLQ +F +ILGI P +L+ RLN VRREL Q+ + A W Sbjct: 229 ITQLCELTHVSRRTLQYSFESILGINPLRFLRLTRLNNVRRELKVVG-QTKPISVIAANW 287 Query: 319 GFWHLGQFATDYQQLFSEKPSLTLHQRMREW 349 GFWH GQF DY QLF E PS T+ ++E Sbjct: 288 GFWHAGQFTKDYTQLFGENPSQTIANTLKEG 318 >UniRef50_A1SRM6 DNA-binding helix-turn-helix domain-containing transcriptional regulator protein AraC family protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRM6_PSYIN Length = 351 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 87/315 (27%), Positives = 146/315 (46%), Gaps = 8/315 (2%) Query: 37 TTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSF 96 T DV + A ++ W+Q Y+Q G+F G E+ L I +F E+T L Q C V NS Sbjct: 22 TFDVNQQAESLIKWEQRYNQHSSGRFSGYLDELKLGGIHLFEEFTNQTLLQQCCVKENSL 81 Query: 97 WFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFL 156 W G + I + + + ++ RP G +FEL TP D+ I G+VL + + Sbjct: 82 WIGFSLQAQ-RPKINNNKIAAGQLMMRPSGVDFELMTPQDFHIFGLVLDGKSLQDEMVE- 139 Query: 157 HNPDRVLHMLRNQSALEVKEQHKAALWGFVQQAL-----ATFCENPENLHQPAVRKVLGD 211 + +R E L +Q L A F P + + L Sbjct: 140 FDAERWQSQKNKILVSEPNHYMIYELAKLIQLLLGNNHYAAFQNRPSDESNRSRLNKLMP 199 Query: 212 NLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRR 271 +L + +L + + V + Q+ ++++S Y+ + P+T+ +LC HVSRR Sbjct: 200 LILSRIADLLAQIESGVKELQVQPQTKQKVISAVSRYIKQTNRYPLTITELCKITHVSRR 259 Query: 272 TLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQ 331 L F LG+ P +++ RLN +RR L+ ++ + + D A+ +GF+H+ F Y+ Sbjct: 260 ALHYCFEQGLGVSPIQYIRDCRLNEIRRILLRDETEVI-ISDLALDFGFFHISTFNAHYK 318 Query: 332 QLFSEKPSLTLHQRM 346 QLF E P+ T+ + Sbjct: 319 QLFEETPTQTIQRSA 333 >UniRef50_C6XCD3 Transcriptional regulator, AraC family n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCD3_METSD Length = 344 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 85/319 (26%), Positives = 138/319 (43%), Gaps = 9/319 (2%) Query: 26 KVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLAL 85 + + +QT D A + W Q Y QL G F G +E+ L D+ +F EYT L Sbjct: 30 TMTSSLIQHQQTGDFEHQASLLKGWNQDYLQLSAGAFEGYVSELYLRDMHLFLEYTNQVL 89 Query: 86 RQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLS 145 QS + + G+P R G A + G FE + + + + + Sbjct: 90 YQSGHLGEDVIAIGVPLQRP-HGMFCGSTCQPAAVHLYSGNQGFEYISAQETLVGVLTIK 148 Query: 146 EDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAV 205 +V+ +++++++ L V E L ++ PE A Sbjct: 149 REVLLAALCPDEQ-AQLMNVIKQARLLPVSESAWIKLCTYLSGTFERLATTPELADSTAF 207 Query: 206 RKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQ 265 + + L + L P A + ++++ RE V + ++ +TV DLC + Sbjct: 208 LESVRMAGLEVIADCLL---PAAEAIHVPGAKSWKMITEVRELVSQPDTQALTVADLCQK 264 Query: 266 LHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQ 325 L SRR+LQ F L I P A+L+ RLN VRR L + +V +AA WGFWH G Sbjct: 265 LGTSRRSLQYHFEQALDISPIAFLRAERLNGVRRMLKTAN----SVTEAATHWGFWHFGH 320 Query: 326 FATDYQQLFSEKPSLTLHQ 344 F+ +Y+++F E PS T + Sbjct: 321 FSQEYKKMFGELPSTTFRR 339 >UniRef50_B2I0G9 AraC-type DNA-binding domain-containing protein n=12 Tax=Proteobacteria RepID=B2I0G9_ACIBC Length = 352 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 64/284 (22%), Positives = 107/284 (37%), Gaps = 5/284 (1%) Query: 62 FHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQC-LGSAEI 120 F + + + R G + N + IP + GSQ + +++ Sbjct: 57 FSATMHHVKTGALSISRLEYGADVIIEPDHLDNFYLIQIPTQGYAEIEFGSQKFISYSQV 116 Query: 121 A-TRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHK 179 A + + L + +S+D T H D ++L L+ Q Sbjct: 117 ASLISPQQSLRMRWHANSPQLILKVSKDDFTYHCRQ-HIADSENNLLVFDPKLDFSTQGG 175 Query: 180 AALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYR 239 A V+ + + LH P K NL A+ Sbjct: 176 AYFLQLVRTLMDALACDQHPLHHPLAFKQFESNLFNALIYGQPNNALHKIDYYKEKTVSP 235 Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 + R Y+ E++ EP+ V L VS RTL F LG P ++LK +R Sbjct: 236 YFVKRTEAYIKEHLHEPLNVEILAEHAGVSVRTLFTGFKNYLGTTPMSYLKELRFEQAHL 295 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 EL+ +++++V D A +WGF HLG+F+ +Y++ + E PS T Sbjct: 296 ELMH--NENLSVTDVAFKWGFTHLGRFSQEYKRRYGELPSSTRR 337 >UniRef50_A5EB19 Transcriptional regulator, AraC family n=2 Tax=Bradyrhizobium RepID=A5EB19_BRASB Length = 325 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 90/318 (28%), Positives = 151/318 (47%), Gaps = 4/318 (1%) Query: 32 VHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLV 91 + Q + DV EH + W+ YDQ+ G F G FT I L +Q+FRE T +RQ + Sbjct: 1 MVQTTSADVDEHCAQLGGWRLTYDQISAGAFRGSFTLISLPRLQIFREVTSQQVRQYGRL 60 Query: 92 WPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITR 151 + F G+ G + + + + + TP + + G+ LS +I Sbjct: 61 DADCFSVGLAWHSGGPLSLNGTGITQDALVV-SFDADIDFCTPRAFELRGMTLSTQLIEA 119 Query: 152 QANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGD 211 A L + + A+ L + A E LH + + L D Sbjct: 120 IAGQL-AIELPADLKHRMRAIAAPADALRRLRAALAAMDAVLGAPEEFLHDTTISEALQD 178 Query: 212 NLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRR 271 +LL+A+ +L +A+ T+ S + +R++++A E +L + +P+++LD+C + SRR Sbjct: 179 SLLLAITDLLPDARLCDTSR--SAAARKRIVAQATEMMLASSDQPLSLLDVCKAVGASRR 236 Query: 272 TLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQ 331 L F +LG P ++ + IRLN VRR+L S + D A++ GFWH QF+ DY+ Sbjct: 237 KLSYCFQDVLGTSPVSYWRAIRLNRVRRDLKSRRDPRDGIYDIAVRHGFWHFSQFSLDYK 296 Query: 332 QLFSEKPSLTLHQRMREW 349 + F+E PS TL + + Sbjct: 297 RHFAELPSETLRRARMDA 314 >UniRef50_B1YYW7 Transcriptional regulator, AraC family n=5 Tax=Burkholderia cepacia complex RepID=B1YYW7_BURA4 Length = 334 Score = 224 bits (570), Expect = 5e-57, Method: Composition-based stats. Identities = 82/335 (24%), Positives = 141/335 (42%), Gaps = 9/335 (2%) Query: 18 PENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVF 77 P + P V TDV E A W Y Q+ G+FHG + + L I++ Sbjct: 7 PSDFSGAP-PLARRVTFCAFTDVEEQARIFDGWHLNYTQISGGRFHGSSSIVSLGGIRLL 65 Query: 78 REYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDY 137 E + Q V + +P + + G + FE +PD + Sbjct: 66 VEDLDKVILQQGAVPSDRVAVAVPLELEGHARMCGEKSGRDSLHVFSSQPVFEFYSPDRH 125 Query: 138 TILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCE-- 195 ++ V ++ D ++ A + + L ++ A+A + Sbjct: 126 VLVNVEIAPDKLSTPALRTFAASLRART--FAPLIPMTAPVADRLRHLLRHAMAAAAKST 183 Query: 196 NPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSE 255 +++ ++L +L A+ + +P A + Y L++ A+ + + + Sbjct: 184 PADDVTTQDRIELLERTVLYAISEAMTMPEPHADALATRSTKYWSLVNAAQARLQDASTC 243 Query: 256 PVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAA 315 P+++ +LC QL +SRRT+Q AF+ L + P A+L+ +RLN VRREL V AA Sbjct: 244 PLSIAELCVQLGISRRTVQYAFNDTLNLNPIAYLRAVRLNHVRRELRLGGP----VTSAA 299 Query: 316 MQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 +WGFWHL FA DY+ +F E PS T + + Sbjct: 300 TKWGFWHLSSFAQDYRAMFGELPSATARRYAQREA 334 >UniRef50_C3KB89 Putative AraC family regulatory protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KB89_PSEFS Length = 313 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 85/309 (27%), Positives = 137/309 (44%), Gaps = 4/309 (1%) Query: 35 RQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPN 94 R D HA +I W+Q+YDQL G ++ + Q+F+E + Q Sbjct: 6 RTFNDPQLHAGSIQGWRQVYDQLGRGCLTSGLRQLSAERFQIFQEVLDKRVVQRGFAPKG 65 Query: 95 SFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQAN 154 + G + Q +G+ + G EF L P+ + + + A Sbjct: 66 RLCVAMSL--GSAPVVQGQQVGAHNVVLLRDGEEFVLHAPEGTHFFALNVDTVRFAKLAA 123 Query: 155 FLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLL 214 F + D++ + +S + V + + + + + + K+L D LL Sbjct: 124 FELSSDQLKR-VTTRSQICVDDALLLRIRQRIYPLFRHLLQQTDPI-SACAEKMLEDELL 181 Query: 215 MAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQ 274 A + A V + L+ R +E + + P+++LDLC L VSRRTLQ Sbjct: 182 GAFLDLFSNATDEVRCRRGNFAVSAYLVKRCQELIDASGDTPLSILDLCEHLRVSRRTLQ 241 Query: 275 NAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLF 334 N+F A+ G+ P +L+ +RLNAVRR+LI+ S V D A+ GF+HL FA Y++LF Sbjct: 242 NSFQAVTGLRPVEYLRNLRLNAVRRQLIATPGGSQNVGDVAVAMGFFHLSHFAAHYRELF 301 Query: 335 SEKPSLTLH 343 E PS T Sbjct: 302 GESPSETQR 310 >UniRef50_C3KBA5 AraC family regulatory protein n=2 Tax=Proteobacteria RepID=C3KBA5_PSEFS Length = 322 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 77/308 (25%), Positives = 130/308 (42%), Gaps = 2/308 (0%) Query: 36 QTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNS 95 DV+ HA TI W Q Y QL G ++ +F E + Q+ + Sbjct: 8 HFRDVHVHAATIQQWNQDYSQLTAGCAESSLMQLTTTGCHLFLEQINQRVVQNGVAPRGK 67 Query: 96 FWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANF 155 F +P + + + + + GG EF P +L + ++ + Sbjct: 68 MCFAVPINVPGSIRMQGREVDDSSLFFLHGGEEFMFHMPMGMELLSITFERELFEQALEQ 127 Query: 156 LHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLM 215 + + +LR Q + V Q A + + + P L +L Sbjct: 128 TASAKELNRLLR-QPVIRVSPQRFARARQRLLALFSQALMYEDLDSTPDREVALEQAMLG 186 Query: 216 AMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQN 275 + ++ + S S + ++ + M +V++LC +L VSRRTLQN Sbjct: 187 ELLQLMTDPACDKHQRSPS-STRSFIVEKCHRLTTAEMINVPSVIELCERLQVSRRTLQN 245 Query: 276 AFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFS 335 +F ++ P +L+ +RLN VRR L+S + +++ DAA QWGF+HL FA +YQ+LF+ Sbjct: 246 SFRSVAETTPLNYLRSVRLNGVRRLLMSTRACELSIGDAAAQWGFYHLSHFAAEYQELFA 305 Query: 336 EKPSLTLH 343 E PS T Sbjct: 306 ELPSHTAR 313 >UniRef50_C4KAZ9 Transcriptional regulator, AraC family n=1 Tax=Thauera sp. MZ1T RepID=C4KAZ9_THASP Length = 345 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 91/311 (29%), Positives = 145/311 (46%), Gaps = 5/311 (1%) Query: 36 QTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLD-DIQVFREYTGLALRQSCLVWPN 94 Q DV + + AW Y+QL PG F G E+ +D ++V E ++ + Sbjct: 28 QVGDVSDFGRGLLAWNATYEQLAPGCFEGGAEELWIDDGLEVLWETGNRSVWTAGSNRAG 87 Query: 95 SFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQAN 154 GIP G G + ++ PGG +FE+ + + I+ +SE ++ A Sbjct: 88 MVSLGIPVAGGGAGMYCGVPIQDGAVSWLPGGGDFEIFSRERMDIVSATVSESLLCGFAA 147 Query: 155 FLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLL 214 + R + L+ + + L + + + P L PA R + D +L Sbjct: 148 S--DSPRTAEASLQRPFLQQQPRRAGMLRRALIEIVVVARRQPGLLEIPASRAAMRDCVL 205 Query: 215 MAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQ 274 M L+ A TA+ + ++ + RE LE SEP+ + D+C L VSRR+LQ Sbjct: 206 SLMLDTLDRASERPTAD-LRPSVKAWIVRKVRELALERPSEPLQIADICRSLAVSRRSLQ 264 Query: 275 NAFHAILGIGPNAWLKRIRLNAVRRELI-SPWSQSMTVKDAAMQWGFWHLGQFATDYQQL 333 AF ++G+G +L+ +RLNAVRREL + S + A +WGFWH+ +FA Y+ L Sbjct: 265 YAFEDLVGMGAVEFLRNVRLNAVRRELRVATGSPDEPIAAIAARWGFWHMPRFAAYYRAL 324 Query: 334 FSEKPSLTLHQ 344 F E PS T + Sbjct: 325 FGELPSETRRR 335 >UniRef50_C6QHZ1 Transcriptional regulator, AraC family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QHZ1_9RHIZ Length = 337 Score = 220 bits (560), Expect = 8e-56, Method: Composition-based stats. Identities = 78/321 (24%), Positives = 136/321 (42%), Gaps = 7/321 (2%) Query: 25 PKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLA 84 P E +H T+D+ E A + W Q Y+Q+ G+F+G F E +D +Q+FRE T + Sbjct: 15 PAGETAIIHAASTSDIDEQAALLRGWNQTYEQISAGRFNGSFLETQIDCVQLFREVTSNS 74 Query: 85 LRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVL 144 L+Q+ + + G P + + ++ G +FE +P I+G VL Sbjct: 75 LQQTGALPEGTIAVGAPLSLHGSATFCGRSCNGQQLHVFSGKDQFEFFSPRGLDIVGFVL 134 Query: 145 SEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPA 204 E + D + + + E + Sbjct: 135 DESDLRSALTHDELEDVMPSLAIPHLRFA-DIAALNRMRSIFLDVCEILAEPDASARDRV 193 Query: 205 VRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCN 264 + +L+ A+ + L + ++ ++ AR+ + E + + DLC Sbjct: 194 RLSSMSRDLIAAIVSGLAHGYGDRFDVPQARRAL--IVRDARDLISEWSQDLKGIADLCR 251 Query: 265 QLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLG 324 +L VSRR LQ +F LG+ P+ +++ +R+N RR + + +V +AA WGFWH G Sbjct: 252 ELGVSRRALQQSFQDTLGVKPSVYMRAVRMNGARRAIKTES----SVAEAATLWGFWHFG 307 Query: 325 QFATDYQQLFSEKPSLTLHQR 345 +FA DY +F E PS + Sbjct: 308 RFARDYNMMFGELPSEAFRRY 328 >UniRef50_A2SJ66 Transcriptional regulator, AraC family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SJ66_METPP Length = 318 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 75/317 (23%), Positives = 126/317 (39%), Gaps = 4/317 (1%) Query: 35 RQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPN 94 Q+ DV + A ++ WQQ Y+QL G+F G ++++ V RE T LR+ + Sbjct: 4 HQSADVDDQAQALSGWQQRYEQLGCGRFRGSARQVVMAGGTVLRESTNRQLREQIRPPSD 63 Query: 95 SFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQAN 154 IP + + L + G E+EL + +L + + + Sbjct: 64 CLVLAIPLSVAPGSVFAGRPLDGDALMVISGHEEYELVAAGELDLLALSVDRRRLGGMLA 123 Query: 155 FLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLL 214 + + AL + A C + ++G L Sbjct: 124 PEEIEWLARAERQRRWALAPDTAGAVRSQLLAVCSAAGRCAPGAVIDIENEPALIGATLA 183 Query: 215 MAMGAMLEEAQPMVTAESISHQSYRRL--LSRAREYVLENMSEPVTVLDLCNQLHVSRRT 272 + + + A I ++ RL + RA E++ N+ E + + ++C SRR+ Sbjct: 184 HTVALAMSDGGADRGAVGIPRRADSRLRVVKRAIEFIRANLQEDIGIPEICAAACASRRS 243 Query: 273 LQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQ 332 LQ F L P A+L+ +RLN RR L P Q +T+ AM GF F Y+ Sbjct: 244 LQYCFEEFLHTTPQAYLRALRLNEARRRLKQPGDQPITLLACAM--GFSSASHFTRHYKL 301 Query: 333 LFSEKPSLTLHQRMREW 349 +F+E PS T +R R+ Sbjct: 302 MFNELPSQTQRRRTRDA 318 >UniRef50_D1SW59 Transcriptional regulator, AraC family n=5 Tax=Proteobacteria RepID=D1SW59_9BURK Length = 341 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 66/324 (20%), Positives = 118/324 (36%), Gaps = 11/324 (3%) Query: 27 VEVDNVHQRQTTDVYEHALTITAWQQ--IYDQLHPG-KFHGEFTEILLDDIQVFREYTGL 83 + D+ E + + Q PG + + L D+ V R G Sbjct: 24 SGAPEHLLFASADIDETRSMVGRVMKPHRLAQAAPGERLDARMHYVSLGDVSVSRLRYGA 83 Query: 84 ALRQSCLVWPNSFWFGIPATRGEQGFIGSQCL--GSAEIATRPGGTEFELSTPDDYTILG 141 A+ + F +P + + G + + G + + + L Sbjct: 84 AVEIQPGPLESFFLVQMPLSGHARIDSGGRQVESGPGTASVLSPNDDTRMQWASGTDQLM 143 Query: 142 VVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLH 201 + ++ + R + LR + Q A + L + P+ Sbjct: 144 LRIARAQVERTLVGHLGRP-LDEPLRFELGF--HWQDCAPWRCLLSYLLDCATQYPDLSQ 200 Query: 202 QPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLD 261 V + L + + TA + R + RA++Y+ + EPV V Sbjct: 201 NKLVVAQIEQ-LACLILLTSHQHNHSETAPARRSTILPRHVRRAQDYLQAHAHEPVCVEQ 259 Query: 262 LCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFW 321 L VS R+L F LG+ P +L+ +R+ VR EL+ ++ V A++WGF Sbjct: 260 LAEVAGVSVRSLYAGFKEFLGVSPMQYLRDLRMEHVRTELL--GGEASNVAGIALRWGFA 317 Query: 322 HLGQFATDYQQLFSEKPSLTLHQR 345 HLG+F+ +Y+Q + E PS TL + Sbjct: 318 HLGRFSNEYKQRYGESPSQTLRRH 341 >UniRef50_A5EM40 Transcriptional regulator, AraC family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EM40_BRASB Length = 348 Score = 217 bits (552), Expect = 6e-55, Method: Composition-based stats. Identities = 93/341 (27%), Positives = 145/341 (42%), Gaps = 12/341 (3%) Query: 18 PENLKLTPKVE-----VDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLD 72 PE L + P+ + RQ+ D + ++ W+ QL PG+ E + LD Sbjct: 8 PEGLSVPPESQPLQTFAPRFVLRQSEDALDQVKSLGGWKIRLQQLSPGRLKAEVAGLHLD 67 Query: 73 DIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELS 132 +IQ RE T AL + + F P G++ +G + GG + Sbjct: 68 NIQFIRERTTQALLKEVETGDDQIVFSQPLQASGPGYVNGHMIGYPDPCLLGGGILPSIR 127 Query: 133 TPDDYTILGVVLSEDVITRQANFLHNPDRVLHML--RNQSALEVKEQHKAALWGFVQQAL 190 TP + + + + + R L + ++ R + L+++ + + Q Sbjct: 128 TPQYLDVASLAVDKAHLLRWLTELGESELADTLISKRQLACLQLEPTSLSIVKDVSLQLC 187 Query: 191 ATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVL 250 L R+ L D+LL A + + S RRL RARE VL Sbjct: 188 GDSGITERVLDFEQCRRTLEDDLLHAF---MRSLRVSRRRSLTSLTLQRRLADRARELVL 244 Query: 251 ENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSM- 309 T+ DLC QL VSRR+LQ+ F G+ P +L+ +RLNAVRREL + S+ Sbjct: 245 ACPDAAPTISDLCRQLGVSRRSLQDGFQGAFGLAPTQFLRVVRLNAVRRELRALAGNSVQ 304 Query: 310 -TVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREW 349 ++ D A +WGFWH +F + Y+ LF E PS T + Sbjct: 305 PSIGDIAARWGFWHWSRFTSYYRGLFGELPSETFRRFGARA 345 >UniRef50_Q88I52 Transcriptional regulator, AraC family n=8 Tax=Pseudomonas RepID=Q88I52_PSEPK Length = 349 Score = 213 bits (543), Expect = 8e-54, Method: Composition-based stats. Identities = 82/316 (25%), Positives = 126/316 (39%), Gaps = 25/316 (7%) Query: 31 NVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCL 90 V TTDV E WQQ Y Q+ PG F GE + LD ++V+ E + Q Sbjct: 58 KVQAFHTTDVTEQVRATPGWQQQYRQMSPGYFSGELRCLGLDGVEVYEERLNTRVEQFFR 117 Query: 91 VWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVIT 150 S F + + + TP++Y + VV + + Sbjct: 118 APSGSLAFCFDRS-------------ENSLYLLNEQSRNIWITPENYQEVAVVFDQAFLA 164 Query: 151 RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLG 210 R L + + A ++ L E L A+ + L Sbjct: 165 RH-------GLDPQRLEGLFMVPLGSGQNALFGSWLSATLTRLGEEGCPLQGQALAEQLL 217 Query: 211 DNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSR 270 ++ L + + Q + R ++ R E+ + E + +L+L + VS Sbjct: 218 EDCLFILDNASQRLQGVALGR---RDEERAIMHRVSEWAADCPEETLNLLELADVAGVSL 274 Query: 271 RTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDY 330 R LQ AF A G+ P WL+ RLN RR+L+ +TV + AM+W FWHLG+F+ Y Sbjct: 275 RQLQQAFKAFTGMPPAHWLRLRRLNGARRDLLRGG--GVTVAEVAMRWSFWHLGRFSESY 332 Query: 331 QQLFSEKPSLTLHQRM 346 +QLF E PS TL + Sbjct: 333 RQLFKEFPSETLKRCR 348 >UniRef50_D1T5H4 AraC family transcriptional regulator n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5H4_9BURK Length = 328 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 70/326 (21%), Positives = 123/326 (37%), Gaps = 18/326 (5%) Query: 29 VDNVHQRQTTDVYEHALTITAWQQIY--------DQLHPGKFHGEFTEILLDDIQVFREY 80 + N T D+ E A W Q Q G+ + + + + V Sbjct: 11 LPNFEDFHTRDI-EQARL---WGQRVFCDNEIISLQ-GKGEINAQMYYRKMGGLGVGFMS 65 Query: 81 TGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQ-CLGSAEI-ATRPGGTEFELSTPDDYT 138 G + + + + IP E GS+ S+ + + G + +L ++ Sbjct: 66 YGGEITINPSQFDGFYLIQIPLCGSECIVRGSEVTYTSSSVGSVLNAGQQIQLVHGENTE 125 Query: 139 ILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPE 198 L + + D++ RQA R + +A+ + V + + Sbjct: 126 KLILRIERDLLERQAAQYLG-HRGPKQVEFDTAMPLDTAVGQRWARTVSWLIDYLGGE-D 183 Query: 199 NLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVT 258 + P + + ++ + A + + + RA ++ EN +P+ Sbjct: 184 IPNSPLIDAQIEQMMVSLLLAS-QHSNLSEGRIGDERTVAPAFVRRAEAFIEENAHKPIA 242 Query: 259 VLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQW 318 V D+ + VS +L F P +LK +RL VR +L S + +TV A QW Sbjct: 243 VSDIAEHVGVSTSSLYAGFRKYRNSSPMIFLKEVRLQRVREQLRSCNAGQVTVTSVAHQW 302 Query: 319 GFWHLGQFATDYQQLFSEKPSLTLHQ 344 GF HLG FATDY++ F E PS TL + Sbjct: 303 GFAHLGHFATDYKRRFGESPSETLAR 328 >UniRef50_A2SII1 Transcriptional regulator, AraC family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SII1_METPP Length = 328 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 98/312 (31%), Positives = 147/312 (47%), Gaps = 20/312 (6%) Query: 33 HQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVW 92 ++TDV EHA ++ W+Q YDQL G F G E + +Q+FRE T LRQ C VW Sbjct: 25 RSHRSTDVDEHASHLSGWRQAYDQLGSGGFEGRLDEAVSAGVQLFRERTSQRLRQRCEVW 84 Query: 93 PNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQ 152 + W GI + + +G+ + FEL +P + I+G V+S + + Sbjct: 85 QGALWCGITVADDG-SRLDGRLVGADGVMVSGEDGGFELVSPAGHDIVGFVVSREALQSH 143 Query: 153 ANFLHNPDRVLHMLRNQSALEVKEQHKAALWGF--VQQALATFCENPENLHQPAVRKVLG 210 A LE+ A W ++ A + A Sbjct: 144 A----------------PGLELPRAGGAGWWAADPARRHAALVHARAILVLAEAGVSCDL 187 Query: 211 DNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSR 270 + ++ + A L +A+ E + + RRL+++ RE + +V +LC LHVSR Sbjct: 188 RSAMLDVVAGLLDARGPERRERGNASARRRLVAQVRERIEAAPDRAPSVPELCAALHVSR 247 Query: 271 RTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDY 330 RTLQ AF +G+ P A+L+ +RLN VRR L +TV+ AA WGFW+L FA DY Sbjct: 248 RTLQYAFEDEVGVNPLAYLRSVRLNGVRRLLREAAP-GLTVQRAAAHWGFWNLSAFAGDY 306 Query: 331 QQLFSEKPSLTL 342 ++ F E+ S TL Sbjct: 307 RRQFGERASETL 318 >UniRef50_B4AUP2 Transcriptional regulator, AraC family n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AUP2_9CHRO Length = 382 Score = 210 bits (534), Expect = 8e-53, Method: Composition-based stats. Identities = 65/318 (20%), Positives = 111/318 (34%), Gaps = 5/318 (1%) Query: 28 EVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQ 87 + V + D+ + + +Q PG F G+ +Q +L Sbjct: 60 KNSLVVTHEFDDIDLFTEALKPLTIVANQTSPGLFKGKINHFRFSGLQFTSISQNQSLYA 119 Query: 88 SCLVWPNSFWFGIPATRGEQGFI-GSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSE 146 F I + I + +++ ++ D I+ ++ Sbjct: 120 KGPKSSCDRTFAITFQSRQTSVIAHGIAVKKSDLFGFDLVRPVDVIVEKDTQIVLANVNL 179 Query: 147 DVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVR 206 A + + + L + Q E PE + + + Sbjct: 180 QAFESLAEKMGYEGFE---FMQNNLVSAHPATFRYLREYYGQISQLLAEKPELIGKAPFQ 236 Query: 207 KVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQL 266 ++ + L + L + L+ +A E L +P+T+ LCN+L Sbjct: 237 ALIRQDFLPLLLDTLGAISRRNQKVKKPFR-RYSLVKKALEIALSFPEQPLTLEQLCNKL 295 Query: 267 HVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQF 326 S L F I G+ P A++K RLN VRR L ++ TV A QWGFW F Sbjct: 296 ETSSSALAYGFQDIFGLSPIAYIKIQRLNGVRRLLKRADPKTTTVMQVAQQWGFWSFSHF 355 Query: 327 ATDYQQLFSEKPSLTLHQ 344 A DY+++F E PS TL + Sbjct: 356 ARDYKKMFGELPSQTLQK 373 >UniRef50_A1TWG5 Transcriptional regulator, AraC family n=2 Tax=Acidovorax RepID=A1TWG5_ACIAC Length = 345 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 109/326 (33%), Positives = 155/326 (47%), Gaps = 9/326 (2%) Query: 31 NVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDD--IQVFREYTGLALRQS 88 R + DV EHA ++ W Q YDQL G+F G E+ L +QVF E+T Q Sbjct: 21 RWRVRASEDVDEHADQLSDWSQQYDQLRGGRFAGRVRELWLGGPRLQVFHEHTSPPTSQQ 80 Query: 89 CLVWPNSFWFGIPATRGEQ--GFIGSQCLGSAEIATRPG--GTEFELSTPDDYTILGVVL 144 C W S WFG+P R + F GS+ A+ F L TP+D+ I GVV+ Sbjct: 81 CAPWRGSVWFGVPDARCARPLHFCGSERRTDAQRFVLRARASDGFTLRTPEDFGIYGVVM 140 Query: 145 SEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPA 204 ++ + +A+ + + + A+ V AAL ++ L PE Sbjct: 141 DQEWLRAEADAMGLRGAAVLLSSPAHAVPVDAAAHAALCATIESLLRIAEAAPEPAGTGR 200 Query: 205 VRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLE-NMSEPVTVLDLC 263 + L LL + A P V + Q L+ AR + + + V LC Sbjct: 201 -HQALVRRLLRQLCGDPAAAAPAVAPPQGAAQRRFALVMAARAWAGQPCCGDARDVDALC 259 Query: 264 NQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHL 323 LHV+RRTLQN FHA+LG P +LK +RLNA RR L + TV++ A +WGF+H+ Sbjct: 260 RHLHVTRRTLQNHFHAVLGQSPAEFLKAVRLNACRRALRTAAPGE-TVQEIAERWGFFHM 318 Query: 324 GQFATDYQQLFSEKPSLTLHQRMREW 349 G F+ DY+ LF E PS TL +R + Sbjct: 319 GHFSQDYKTLFGEAPSQTLRRRAPQA 344 >UniRef50_C5AKE9 Transcriptional regulator, AraC family protein n=2 Tax=Burkholderia RepID=C5AKE9_BURGB Length = 344 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 65/335 (19%), Positives = 117/335 (34%), Gaps = 12/335 (3%) Query: 21 LKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPG---KFHGEFTEILLDDIQVF 77 L P N+ Q+TD+ E ++ + + G HG ++ + Sbjct: 10 LADAPWFNCGNL-LMQSTDLDEVRASVADVLKPHRLTVAGGASALHGRLHHTRWGNLSLN 68 Query: 78 REYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCL--GSAEIATRPGGTEFELSTPD 135 G + + F +P + G Q + + + + Sbjct: 69 LLDYGSEVIIEPDRLEDFFLLQVPLQGQAEIECGGQRFVSSPSTASLVSPSLALRMRWGE 128 Query: 136 DYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCE 195 + + + R A H + + ++ L + Sbjct: 129 ACPQAILRIERSAMERHAQR-HFGEAARGPIEFAPEFDLTSPQGQCLMQLLPVLAEIMST 187 Query: 196 NPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSE 255 L + LL A+ + A + R EY+ ++ E Sbjct: 188 EAHPLRHALAFEQFESTLLNALIYGQPNSARNDKARE-RRPLAPTCVRRVEEYIRTHLQE 246 Query: 256 PVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWS----QSMTV 311 P+T+ L +VS TL AF G+ P A+++++RL VRR+LI + +V Sbjct: 247 PLTIEQLAEFGNVSASTLFAAFKHYHGVTPMAFVRQLRLERVRRDLIGADAMHGTGRPSV 306 Query: 312 KDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 D A++WGF HLG+FA +Y++ F E PS +L R Sbjct: 307 TDIALKWGFAHLGRFAMEYKRAFGESPSASLRMRR 341 >UniRef50_Q488C6 Transcriptional regulator, AraC family n=2 Tax=Colwellia psychrerythraea 34H RepID=Q488C6_COLP3 Length = 330 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 80/324 (24%), Positives = 140/324 (43%), Gaps = 4/324 (1%) Query: 25 PKVEVDN-VHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGL 83 P +DN V T+DV E + + Y QL G+ +G + E L D+Q+FRE Sbjct: 8 PSTTIDNNVRGISTSDVDELSQFQLNKNRRYTQLQAGQLNGAYLEANLGDVQIFRESLNA 67 Query: 84 ALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVV 143 + F + + + + GG ++ S + Sbjct: 68 GALIEAAPASSFLPFAAITSNADNFKYCGKQREKNTVLQATGG-FWDASFQHSLNFVVAA 126 Query: 144 LSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQP 203 +R L + +Q+ L K G + L PE L + Sbjct: 127 FDRKAFSRSIELLTGEEVPQAWFVSQACLTEPHALKTYACG-LDNILTIIKSRPEILKKD 185 Query: 204 AVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLC 263 V+++L D++L + +L + P+ + +S + + + +Y+ + T+ +LC Sbjct: 186 NVQRMLSDSILRLILKVLSKTTPINV-QQVSPSNRAQGVRMVIDYLHHYADQVPTIPELC 244 Query: 264 NQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHL 323 N +S R LQ F+ LGI P +L+ +RLN V+R+L+ + + D A+ WGF L Sbjct: 245 NIAKLSERNLQYGFNEYLGITPIRYLRLVRLNGVKRDLLLSHPKKDRIVDIALNWGFIEL 304 Query: 324 GQFATDYQQLFSEKPSLTLHQRMR 347 G+FA +Y+QLF E PS+TL++ + Sbjct: 305 GRFAGEYRQLFQELPSVTLNKLNQ 328 >UniRef50_D2BF03 AraC family transcriptional regulator n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2BF03_STRRD Length = 329 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 104/287 (36%), Gaps = 4/287 (1%) Query: 61 KFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEI 120 + F L +++ G +R + F IP G Q + S + Sbjct: 45 RLAARFHSAQLGGVRINYLDYGTDVRIEPGELESFFLVQIPLAGRSLIRCGGQEIVSTPL 104 Query: 121 A--TRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQH 178 ++ L V + + +R+ L L++ Sbjct: 105 LASLPSPSEHLDMRWEAGCPQLIVKFDRTAVEGALEQMLG-ERLDRPLVFDLGLDMTAGW 163 Query: 179 KAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSY 238 A + QP L + +L ++ M ++ + Sbjct: 164 ARAWRAMTDLIIGEAEHGDGLAVQPLAIAHLENAMLSSLLTMQPSNYR-ARLDAPRPPAV 222 Query: 239 RRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVR 298 +++ RA E++ + +P+T D+ + VS R+LQ F LG+ P +L+ +RL V Sbjct: 223 PKVVRRAMEFIDGHAHQPLTTDDVARAVAVSGRSLQEGFRRHLGLTPMTYLRDVRLGRVH 282 Query: 299 RELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 EL++ TV A +WGF H G+FA Y+ + + PS TL R Sbjct: 283 EELVTGDPARCTVTGVAARWGFLHQGRFAAAYRARYGQAPSHTLRGR 329 >UniRef50_Q1LI32 Transcriptional regulator, AraC family n=3 Tax=Cupriavidus RepID=Q1LI32_RALME Length = 337 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 61/293 (20%), Positives = 100/293 (34%), Gaps = 8/293 (2%) Query: 57 LHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLG 116 LH + + + R G + + +P G Q + Sbjct: 50 LHGNALRARMHHVPVGAVSFNRLSYGGDVTIDPGPLGDFLLIQMPMAGQADIHCGGQHVV 109 Query: 117 SAE--IATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEV 174 S + + D L V + + R R LR Q + Sbjct: 110 SDSECASVLTPSEPLRMRWSADNDQLIVRIERSALERVCAAYLGR-RPNQPLRFQLGMAW 168 Query: 175 KEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESIS 234 + VQ T P+ P L + + + V E Sbjct: 169 RN---TGWQSLVQYLADTLNHAPQTASHPLTACQLEQLAIGTLLTFQPHSLSDVLREH-G 224 Query: 235 HQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRL 294 R + EY+ + VT L VS R+L F G+ P +L+ +RL Sbjct: 225 KPLAPRHVKVVEEYIHAHADAAVTPALLAEMAGVSLRSLYAGFREHRGLSPMTYLRTVRL 284 Query: 295 NAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 VR++L++ + +V AA++WGF HLG+F+ +Y++ F E P TL +R R Sbjct: 285 ERVRQDLLN-DASLSSVTAAALRWGFAHLGRFSVEYRRAFGECPGETLRRRGR 336 >UniRef50_A1K6X6 Putative AraC-family transcriptional regulator n=1 Tax=Azoarcus sp. BH72 RepID=A1K6X6_AZOSB Length = 328 Score = 204 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 65/316 (20%), Positives = 118/316 (37%), Gaps = 8/316 (2%) Query: 36 QTTDVYEHALTITAWQQ--IYDQL-HPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVW 92 + DV E + +QL + + + G + + Sbjct: 16 CSRDVDETRRIVAGIYCDHRLEQLRGSECLDYHHVHQRVGAVSFSQMRYGADVMVAPGSL 75 Query: 93 PNSFWFGIPATRGEQGFIGSQCLG--SAEIATRPGGTEFELSTPDDYTILGVVLSEDVIT 150 + F +P + ++ I L + ++ D T V + D + Sbjct: 76 QSFFLIQVPLSGRDRMRIDGAELDSDPRHATVHAPHSGLTMNWSGDCTKFVVRIERDALE 135 Query: 151 RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLG 210 R A+ L D V + + +++++ + Q NP QP V + Sbjct: 136 RHASALAGRD-VSRTIAFCNRVDLQDPMARSWVSTAQHLFGELRSNPALADQPLVSNHIE 194 Query: 211 DNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSR 270 LL L + T+ R + RA E + +P+T+ L + VS Sbjct: 195 QLLLTTALNWLPGSFANATSGGARL-VLPRHVRRAEELMRGCPEQPITMESLAAHVGVSA 253 Query: 271 RTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDY 330 RTL + F LG+ P +L+ +R+ R +L+ P + +V A WGF+ LG+FA DY Sbjct: 254 RTLYDGFRNFLGVSPMRYLRDLRMERARADLLDPAQPA-SVTTIATHWGFFQLGRFAADY 312 Query: 331 QQLFSEKPSLTLHQRM 346 ++ + E P T+ +R Sbjct: 313 RRRYGEHPRETMARRA 328 >UniRef50_Q39MU6 Transcriptional regulator, AraC family n=10 Tax=Burkholderia RepID=Q39MU6_BURS3 Length = 355 Score = 201 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 62/317 (19%), Positives = 109/317 (34%), Gaps = 8/317 (2%) Query: 36 QTTDVYEHALTITAWQQIYDQLHPG---KFHGEFTEILLDDIQVFREYTGLALRQSCLVW 92 Q+ DV E + + + G H ++ + G + Sbjct: 38 QSNDVDEVRARVADVFKPHRLTPTGESRALHSCMHHARWGNLSLNLLDYGGGVSIEPGPL 97 Query: 93 PNSFWFGIPATRGEQGFIGSQCL--GSAEIATRPGGTEFELSTPDDYTILGVVLSEDVIT 150 + F IP + GS + ++ D + + + +V+ Sbjct: 98 EHFFLLQIPLRGDAEIECGSARFVSSPGTASLISPTLPLKMRWGDACPQVILRIEREVME 157 Query: 151 RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLG 210 R A DR + + + L + + L P + L Sbjct: 158 RHAQRHFGDDR-RAPVEFEPEFSLSSSQGTCLAQMLPILAGAIATDAHPLRHPLAFEPLE 216 Query: 211 DNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSR 270 L+ + + + R +Y+ ++ EP+T+ L VS Sbjct: 217 ST-LLNLLLHGHPNSARNGTRHLPVALAPFYVRRVEDYIRAHLDEPLTIERLAELAGVSP 275 Query: 271 RTLQNAFHAILGIGPNAWLKRIRLNAVRRELI-SPWSQSMTVKDAAMQWGFWHLGQFATD 329 TL F GI P +++++RL VR EL+ +V D A++WGF HLG+FA + Sbjct: 276 STLFAGFRHRHGITPMGFVRQLRLQHVREELLADASPGHASVTDIALKWGFAHLGRFAIE 335 Query: 330 YQQLFSEKPSLTLHQRM 346 Y++ F E PS TL R Sbjct: 336 YKRAFGESPSATLRMRR 352 >UniRef50_A4JQI4 Transcriptional regulator, AraC family n=5 Tax=Burkholderia RepID=A4JQI4_BURVG Length = 321 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 86/311 (27%), Positives = 136/311 (43%), Gaps = 6/311 (1%) Query: 34 QRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWP 93 R +DV+ H+ I W Q YDQ+ PG + VFRE + Q L Sbjct: 14 SRCFSDVFLHSQAIVNWSQHYDQISPGIATTTLRQAAGQRFHVFRERINQRVMQHGLAPR 73 Query: 94 NSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQA 153 F +P + + + + T GG EF P D +L + + A Sbjct: 74 GRLCFALPIANTAAPIVQGRTVARPSLLTLRGGEEFVAHLPCDTEVLAFTIDRTLTADHA 133 Query: 154 NFLHNPDRVLHMLRNQSALEVKEQH-KAALWGFVQQALATFCENPENLHQPAVRKVLGDN 212 L + + Q L + + AL G + +VL N Sbjct: 134 --LDELANLPARVLRQPVLPISPVRYRTALDGLERVLCQALDHGSLTARDAFDERVLAHN 191 Query: 213 LLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRT 272 ++ + +++ + A S + ++ R++E + + TV+DLC+ L +SRRT Sbjct: 192 VVGILLDLVQSDEADAGALP-SASTQSYIVRRSQE-IALECDDVPTVIDLCHHLRISRRT 249 Query: 273 LQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQ 332 LQ +F ++G P A+L+ IRLNAVRR L++ ++M + DAA Q+GF H G+F+ YQQ Sbjct: 250 LQYSFQNVVGTTPTAYLRSIRLNAVRRFLMTT-PETMRIGDAAAQFGFCHFGRFSAYYQQ 308 Query: 333 LFSEKPSLTLH 343 F E PS T Sbjct: 309 HFHELPSHTPR 319 >UniRef50_A1WJE1 Transcriptional regulator, AraC family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WJE1_VEREI Length = 327 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 61/321 (19%), Positives = 116/321 (36%), Gaps = 11/321 (3%) Query: 28 EVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQ 87 + H +V +H T+ A+++ GK L + F G A+ Sbjct: 14 KTPLFHSCDPNEVKQH--TVKAFKEHELTWGGGKVDSALYGAQLGTLSFFILRYGAAVHI 71 Query: 88 SCLVWPNSFWFGIPATRGEQGFIGSQCLG--SAEIATRPGGTEFELSTPDDYTILGVVLS 145 + F P + Q +G + A +L + + V Sbjct: 72 NPGELNGFMLFQAPLSGNAQIRVGRHTVAASPQMGAIISPKLALQLDWSEGCEQVLVKFP 131 Query: 146 EDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAV 205 + + L D + + + + Q L + N E QP Sbjct: 132 RERVEHACRALIGNDLKKGAIEFHPEMPLHAASGRSW----QYHLGSLLCNHEFSDQPHS 187 Query: 206 RKVLGDNLLMAMGAMLEEAQPMVTAESISHQ--SYRRLLSRAREYVLENMSEPVTVLDLC 263 ++ + + +L + + + + +R L A +Y+ ++ EP+T+ + Sbjct: 188 EPLVHAQVQTLIHHLLLCQPNNYSDQLLRRPGTAPQRKLRVAEDYITSHLHEPLTLEAIA 247 Query: 264 NQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHL 323 N R+L AF P A++++ RL A R EL++ + V D A++ GF HL Sbjct: 248 NACGTGVRSLCAAFREHYQCAPMAYVRQKRLAAARSELMNAAPGAH-VTDIALRCGFSHL 306 Query: 324 GQFATDYQQLFSEKPSLTLHQ 344 G+F+ Y+ + E P TL + Sbjct: 307 GRFSLSYRARYGETPLQTLRR 327 >UniRef50_Q46TV6 Transcriptional regulator, AraC family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46TV6_RALEJ Length = 330 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 81/330 (24%), Positives = 137/330 (41%), Gaps = 4/330 (1%) Query: 16 PLPENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQ 75 P P + + + A + WQQ Y QL PG F E +++ D+ Sbjct: 5 PTPSSPSPQEPAPARTLRHIVADEAQAAAAELDGWQQRYQQLTPGVFRAEVSQVTYGDVH 64 Query: 76 VFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPD 135 VFRE T +L + +P + + G+ + + G + TP Sbjct: 65 VFRELTSQSLLEEGEAARGYVSLALPDVQCQGGWFSGYAMDGQTLLCAGNGRALAMRTPL 124 Query: 136 DYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCE 195 + G+ + + R L + R +V + + LAT Sbjct: 125 QLDLAGLTVPMPALQRAMALAGG--ETLRLERMAPVRQVTKGASREFRAVLLSVLATAAI 182 Query: 196 NPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSE 255 + E V + D LL+A L + + RRL++ A + + + Sbjct: 183 DAEVFSNRFVESAMRDALLLAAATALVGEGIDGNEPLPTIPARRRLVADAYQMIRSAPDQ 242 Query: 256 PVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAA 315 P ++L LC +L VSRRTLQ +F+ + G+ P +++ +R+N VR+ L + ++ +V AA Sbjct: 243 PWSILSLCERLGVSRRTLQYSFNEVTGLSPLDFVRAVRMNGVRQALRTGAAE--SVGGAA 300 Query: 316 MQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 +GF HL +FA Y+ F E PS TL +R Sbjct: 301 ASFGFQHLPRFAAQYRAFFGELPSATLARR 330 >UniRef50_A1K6U8 Putative AraC-family transcriptional regulator n=1 Tax=Azoarcus sp. BH72 RepID=A1K6U8_AZOSB Length = 335 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 61/319 (19%), Positives = 112/319 (35%), Gaps = 8/319 (2%) Query: 35 RQTTDVYEHALTITAW--QQIYDQL-HPGKFHGEFTEILLDDIQVFREYTGLALRQSCLV 91 +++D E + Q+ F + L + + G + Sbjct: 18 FRSSDAEESRQHVARVFCPHELRQVTGRRPFASRHNMLRLHETALNYLTYGTDVDILPGR 77 Query: 92 WPNSFWFGIPATRGEQGFIGSQCL--GSAEIATRPGGTEFELSTPDDYTILGVVLSEDVI 149 + + +P G G Q + E + D L + + + + Sbjct: 78 LESFYLVQMPLAGGADIRCGEQAVLSSPRLATILSPDDETRMRWQHDARQLLLWIPREAL 137 Query: 150 TRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCE-NPENLHQPAVRKV 208 R+ +R L L E + + A + + L Sbjct: 138 ERRLEEHLG-ERPDRPLSFHLGLPQDEGLTRSWCRMLADLAANIDQCGADWLRFRPTVAA 196 Query: 209 LGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHV 268 L D LL + + + + R + RA +YV ++ E ++V D+ V Sbjct: 197 LEDCLLRGLLQLHQHNYSD-CLNAPRDTGKPRHVQRAMDYVQAHIEEGISVGDIARAACV 255 Query: 269 SRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFAT 328 S R L+ F P A+L+ +RL R+ L++ +S +V D A ++GF HLG+F+ Sbjct: 256 SVRALEEGFRKYCDTTPLAYLRELRLERARKALLALPGRSESVTDVAHRYGFVHLGRFSA 315 Query: 329 DYQQLFSEKPSLTLHQRMR 347 Y+ F E PS T+ + R Sbjct: 316 YYKARFGETPSQTVGRARR 334 >UniRef50_Q6W1W0 Putative AraC family transcriptional regulatory protein n=1 Tax=Rhizobium sp. NGR234 RepID=Q6W1W0_RHISN Length = 325 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 61/318 (19%), Positives = 113/318 (35%), Gaps = 8/318 (2%) Query: 30 DNVHQRQTTDVYEHALTITAW--QQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQ 87 + + +D A T+T+W + L + + + + + + Sbjct: 10 PDWVTFEGSDPDRLAATLTSWTSNVVVRPLSRERISYKCAWANAGIVSIGSTHFDGQILF 69 Query: 88 SCLVWPNSFWFGIPATRGEQGFIGSQCL--GSAEIATRPGGTEFELSTPDDYTILGVVLS 145 +P G +G Q A G + + V + Sbjct: 70 ESEGAGGQLVLIVPRRGGVDLRMGRQAFCTSPGRGAVIEGNQRIAARSLSSREHMFVAID 129 Query: 146 EDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAV 205 + + R+ + L +++ A+ A P Sbjct: 130 QAALYRRLCDVVEMPA-SGALEFSPEIDLLSGPGTAIASIAATLRAGLDGEAPLRRSPLA 188 Query: 206 RKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQ 265 L + L+ + L + S R + +A E+++ N+S+P+T++++ Sbjct: 189 LTNLSEALIQVILDTLPHRFSEKMRRAASP--VPRHVKKAVEFMMANLSKPITLVEVAAV 246 Query: 266 LHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQ 325 VS RTLQ F P ++L+ +RL A+R EL ++ D A +WGF H+G+ Sbjct: 247 CGVSSRTLQQGFRQFKMTTPMSYLQDLRLKALREELTQARP-GQSIADIAFKWGFTHMGR 305 Query: 326 FATDYQQLFSEKPSLTLH 343 ATDY+ F E PS TL Sbjct: 306 LATDYRNRFGELPSQTLR 323 >UniRef50_A5VD66 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VD66_SPHWW Length = 327 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 71/327 (21%), Positives = 119/327 (36%), Gaps = 11/327 (3%) Query: 26 KVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHG----EFTEILLDDIQVFREYT 81 E+ TTD+ HA +L PG G F + + V Sbjct: 4 AGELSRHSILSTTDLD-HARHAVGRIFCPHRLTPGSELGEGVVRFHHAPVRALSVNWVDY 62 Query: 82 GLALRQSCLVWPNSFWFGIPATRGEQGFIGSQ--CLGSAEIATRPGGTEFELSTPDDYTI 139 G + + + + I + + + L + E + E + Sbjct: 63 GRDVVIDPVPFEKFYLLQILRSGSAEIGCNGRRFALAAGEASLLNPDDEVSMRWSGHCHK 122 Query: 140 LGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPEN 199 L V + + R A + L ++ + A G V+ + F Sbjct: 123 LIVRIERAALERFAEDWFGF-YLPGPLNFENRPGWETPELAVARGLVELIVQDFESGVAT 181 Query: 200 LHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTV 259 L ++ + L A+ + R + RA +Y+ + E + + Sbjct: 182 LSHAKAQRHFEEALFTALLMSRRHSLSGHM--QAGASVVPRAVKRAEDYIAAHAGEDIGI 239 Query: 260 LDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWG 319 DL VS RTL +F G+ P +L+R RL+ VR EL+ P S ++V D AM+W Sbjct: 240 ADLVAASEVSNRTLFESFRRFRGVTPMQYLRRYRLDRVREELLDPGSD-VSVTDVAMRWN 298 Query: 320 FWHLGQFATDYQQLFSEKPSLTLHQRM 346 F LG+F++ Y +F EKPS TL + Sbjct: 299 FDQLGRFSSYYASVFGEKPSQTLRRGR 325 >UniRef50_A1UDL6 Transcriptional regulator, AraC family n=6 Tax=Mycobacterium RepID=A1UDL6_MYCSK Length = 369 Score = 197 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 62/332 (18%), Positives = 115/332 (34%), Gaps = 11/332 (3%) Query: 21 LKLTPKVEVDNVHQRQTT-----DVYEH--ALTITAWQQIYDQLHPGKFHGEFTEILLDD 73 + PK+ +R+T EH + T + Y + + + + + Sbjct: 38 MANGPKMAGSYFSRRETVCTEQLSAAEHLASEIFTPHRLRYSRRGQ-RLNARLSAARIGA 96 Query: 74 IQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIG--SQCLGSAEIATRPGGTEFEL 131 + V G + + + +P T + G + + A G + Sbjct: 97 VTVGYLRYGADVELVNSTALDDYHINVPLTSHADSWCGPATAQATPTQAAVFLPGRPAGI 156 Query: 132 STPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALA 191 D L V S + + L V L ++++ A + Sbjct: 157 KWAADCGQLCVKFSRTDLEYELEGLLGRPAV-RPLNIAHSMDLTADSSRAWRALLSVLYR 215 Query: 192 TFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLE 251 + P + L+ Q M A ++L A + + E Sbjct: 216 EVSRPESIVQHPMTGRHFEQLLIHGFLLAQPHYQAMALAADQHAAPPPKVLRTALDLIEE 275 Query: 252 NMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTV 311 + T DL ++ +S R LQ +F +G+ P +L+ +RL EL + ++TV Sbjct: 276 HPERSWTTTDLAREVGISVRALQESFKRHVGLPPLTYLREVRLIRAHAELAASSESAVTV 335 Query: 312 KDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 AM+WGF HLG+F+ +Y++ F P TL Sbjct: 336 ARVAMKWGFGHLGRFSAEYRRKFGVTPQHTLR 367 >UniRef50_Q47GE0 Transcriptional regulator, AraC family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47GE0_DECAR Length = 330 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 68/320 (21%), Positives = 117/320 (36%), Gaps = 8/320 (2%) Query: 31 NVHQRQTTDVYEHALTITAWQQIY--DQLHPG-KFHGEFTEILLDDIQVFREYTGLALRQ 87 +V +TD+ E + + Q+ + + I ++ G + Sbjct: 12 HVRILSSTDIDETRQLVADVFCDHGLKQIGADERLNYHHVLIGGAAVEFSIMNYGARVSV 71 Query: 88 SCLVWPNSFWFGIPATR-GEQGFIGSQCLG-SAEIATRPGGTEFELSTPDDYTILGVVLS 145 + + IP S+ + + + D L V + Sbjct: 72 EPGPLESFYLVQIPLEGVDVVLADNSEAISHKGCASVHSPHHHLRMCWSADCKKLVVRVD 131 Query: 146 EDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAV 205 + + RQA L + L A++V+ A+ + P L P V Sbjct: 132 KVALERQAVNLTG-GALRGSLEFDLAMDVESGPGASWGRLAASFVDEIRRTPSILKSPIV 190 Query: 206 RKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQ 265 L+ ++ E S R + EY+ N P+T+ +L + Sbjct: 191 AAQFEQLLMTSLLEWQPNNHLTAFREQQVVGS-PRYVRLVEEYMEANCHLPITLENLVSI 249 Query: 266 LHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQ 325 VS R+L F GI P L+ IR++ VR EL +P ++S +V + A +WGF+ LG+ Sbjct: 250 SGVSGRSLFAGFRKFRGISPMNHLRNIRMSRVRSELETPSTES-SVTEVATRWGFYELGR 308 Query: 326 FATDYQQLFSEKPSLTLHQR 345 FA Y+ F E PS TL + Sbjct: 309 FAAAYKSRFGEYPSETLKRY 328 >UniRef50_P43462 Probable thc operon regulatory protein n=3 Tax=Rhodococcus RepID=THCR_RHOER Length = 332 Score = 194 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 55/287 (19%), Positives = 97/287 (33%), Gaps = 8/287 (2%) Query: 62 FHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGS--QCLGSAE 119 F T + + R + +S+ IP G Sbjct: 44 FQMRMTAASFGPVTLGRLDYSTEVEIFTNELRDSYHVNIPMRGELVTGSGRARTVATPHR 103 Query: 120 IATRPGGTEFELS---TPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKE 176 A L +P +L + + + Q + ++ + L++ Sbjct: 104 AAVYRCDQRTLLRGWASPYPTPVLALKIDRRALEDQLAARLGSE-IVDPIVFGMDLDLDT 162 Query: 177 QHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQ 236 V+ P V + + L+ + E E Sbjct: 163 VVGRQWLSLVEGLSHQLDSPEALALHPIVSTPMAECLMSGLLVAAEHDYRARLYEP--KP 220 Query: 237 SYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNA 296 + ++ A +Y+ + +P+TV + + VS R+LQ F LG P LK IR+ Sbjct: 221 ALPGIVRLAVDYLEAHAQQPLTVAQVARNVGVSVRSLQVGFQNSLGTTPMRQLKIIRMQK 280 Query: 297 VRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 R++L+ S V + A +WGF H+G+FA +Y+Q F PS L Sbjct: 281 ARKDLLRADPASEGVTEIAQRWGFLHVGRFAGEYKQTFGVSPSEDLR 327 >UniRef50_Q0K6C4 Transcriptional regulator, AraC-family n=3 Tax=Cupriavidus RepID=Q0K6C4_RALEH Length = 361 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 91/292 (31%), Gaps = 4/292 (1%) Query: 61 KFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFI--GSQCLGSA 118 + + + A++ + F + G+ + Sbjct: 72 ALDARIDTSTIGRLTLVTIAYNQAVQIEPQPNKDEFVIQTVLAGTCRVETPRGAMLMPPG 131 Query: 119 EIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQH 178 LS VV+ +I + + + + + Sbjct: 132 ATFVFSPTVPATLSLDPGCERFSVVIRRQLIDEAFRQQFSFEPPV-PIEFDMQPVADDGR 190 Query: 179 KAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSY 238 A V A E PAV + +L + A + Sbjct: 191 AARWQALVSYLRAETRVRREGSGVPAVDGSIERIVLSTLLLDRFAADGNMLPRRFEA-VL 249 Query: 239 RRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVR 298 + A Y+ N+ +P+T+ + VS RTLQ F P +L+ +RL+ R Sbjct: 250 PDYVRNAIAYLRANLEQPLTLEQIAAHCGVSARTLQLGFRKSKNTTPMEYLRLLRLHGAR 309 Query: 299 RELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 +L Q V A++ GF HL F+ +Y++ F E PS TL ++ G Sbjct: 310 ADLQRARQQKGMVSAIALRHGFTHLSLFSREYRREFGELPSQTLRAAAQQGG 361 >UniRef50_Q0SIM0 Transcriptional regulator, AraC family protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SIM0_RHOSR Length = 301 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 102/287 (35%), Gaps = 5/287 (1%) Query: 60 GKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCL--GS 117 G F I + G +R + + IP + + G++ Sbjct: 18 GAASCRFHSAAAGTIGLHYLEYGTGMRIRPSDLDDFYLVQIPLSEVAEINWGAKTFESTP 77 Query: 118 AEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQ 177 A + G + L V + + RQ + LR +E++ Sbjct: 78 AVASILQPGGSTTMEWRKGNRQLIVRIDRQGLERQVQEALGAP-LREPLRFDLRMELERT 136 Query: 178 HKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQS 237 + ++ ++P V K LL + + + Sbjct: 137 GIRSWRDVLELLRGEMENGGSLSNEPIVMKEFERLLLSQLIVAQPNNYTEALQRPV--PA 194 Query: 238 YRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAV 297 R + RA E + + E +TV D+ + +S R LQ+ F G P +L+ +R+ V Sbjct: 195 APRTIRRAVEILEHHADELLTVEDVASATGISVRALQDGFKKYYGTTPMGYLREVRMKTV 254 Query: 298 RRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 R L+ + TV DAA + GF HL +F+ Y++ F E P TL + Sbjct: 255 RAWLLDADPSTTTVSDAASRCGFVHLERFSVQYREKFGETPPATLRR 301 >UniRef50_Q5LPA0 Transcriptional regulator, AraC family n=1 Tax=Ruegeria pomeroyi RepID=Q5LPA0_SILPO Length = 348 Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 54/329 (16%), Positives = 106/329 (32%), Gaps = 11/329 (3%) Query: 24 TPKVEVDNVHQRQTTDVYEH----ALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFRE 79 + HQ +T D+ E A + Q F + + Sbjct: 21 PDTPPLSRFHQFRTADLDEARALVARNFCGHRLE-RQAREDAFDACQNRAGGNGLFYNYI 79 Query: 80 YTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIA--TRPGGTEFELSTPDDY 137 G + + + +P G + + + Sbjct: 80 RYGADVEIEPGELGSFYLIQVPIRGQALIRNGRTEVETGSAIASVLNPDRHTRMRWLAGC 139 Query: 138 TILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENP 197 + + + + +T A L + +R ++ ++A++ Sbjct: 140 EQVLLQIDRNRLTAVAETLTGTA-LQSPVRFDPQIDRARPEMQRWLALFRRAVSAVDHGA 198 Query: 198 EN-LHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEP 256 Q R ++ D L+ + + + + RAR+++ ++++P Sbjct: 199 LLDPDQALSRALVEDELIAGFLRAQPSSIAPLLERPETGPLSP-HVRRARDFMQAHLADP 257 Query: 257 VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAM 316 +T+ + S R LQ F +L + P A+L+ +RLN R L +T+ A Sbjct: 258 LTLSQIAAAAGTSPRNLQLGFSQLLEMTPLAYLRVLRLNYARYLLRE-SPPQVTIASIAG 316 Query: 317 QWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 GF HLG+F+ Y F E PS T Q Sbjct: 317 AAGFSHLGRFSAQYAARFGEGPSQTRKQH 345 >UniRef50_A1T7M7 Transcriptional regulator, AraC family n=2 Tax=Mycobacterium RepID=A1T7M7_MYCVP Length = 326 Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats. Identities = 53/325 (16%), Positives = 116/325 (35%), Gaps = 8/325 (2%) Query: 27 VEVDNVHQRQTTDVYEH----ALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTG 82 + T D+ + ++ D F I L ++ + Sbjct: 3 PALTEHEIFYTEDISKATRLIGRALSPLTLTVDPADADGFAATMHGIRLRNVSMLYLDLH 62 Query: 83 LALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEI--ATRPGGTEFELSTPDDYTIL 140 + + +P S ++ + G + D L Sbjct: 63 VPASIDIPESGRYYAVHMPMNGVAMVHHPSSTFQASTLRSLVSSPGVPLRIDLGVDTPQL 122 Query: 141 GVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENL 200 + + + +T L + + L + ++ + VQ + Sbjct: 123 LIRIEQQAMTAHVTRLIGRN-LARPLVFEPEFDLATEAAMRWNAAVQLVHTEVYHAGSLI 181 Query: 201 HQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVL 260 + + + ++ ++ + + R ++ +A +++ ++++E +T+ Sbjct: 182 QKGRAIGPVEELVMSSLLHLQPSNYHADITQPSPPDPRRTVIQQAMDFIDDHLAERITMD 241 Query: 261 DLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISP-WSQSMTVKDAAMQWG 319 L +H+S R++Q F + LG+ P A+++ RL V EL S +TV A +WG Sbjct: 242 SLAAAVHMSVRSIQQGFRSELGMSPMAFVRERRLERVHEELADAIPSDGVTVTAVAERWG 301 Query: 320 FWHLGQFATDYQQLFSEKPSLTLHQ 344 F HLG FA +Y++ + E PS TL + Sbjct: 302 FHHLGSFAVEYRKRWGEAPSETLRR 326 >UniRef50_Q0SE50 Transcriptional regulator, AraC family protein n=8 Tax=Nocardiaceae RepID=Q0SE50_RHOSR Length = 315 Score = 190 bits (482), Expect = 8e-47, Method: Composition-based stats. Identities = 59/319 (18%), Positives = 116/319 (36%), Gaps = 12/319 (3%) Query: 29 VDNVHQRQTTDVYEHALTITAWQQIYDQLHP-GKFHGEFTEILLDDIQVFREYTGLALRQ 87 + + Q D A+ + L P G + L + + R G + Sbjct: 4 ASTITETQDWDAASRAVAGAYFPHTLTDLSPNGAMKLSMRTVDLGPVTLGRLGWGADVSI 63 Query: 88 SCLVWPNSFWFGIPATRGEQGFIGSQCL--GSAEIATRPGGTEFEL-STPDDYTILGVVL 144 C +P+++ IP + + + + + D ++LGV Sbjct: 64 ECD-YPDAYEINIPLSGSLESCSQGDTVLSRPGQATVFRADEPTLITRWSGDCSVLGVKF 122 Query: 145 SEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPA 204 + ++A+ + D + L S +++ E + + V+ A E + L P Sbjct: 123 DSAYLEQEADRILGSD-LRPGLHLPSQIDLTEAPGHSWFRLVRSLTAQLREPADLLANPV 181 Query: 205 VRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCN 264 V L + A + + E R++ R + + ++ + T D+ Sbjct: 182 VGPQLAGAITSAFILAVTPDE-----EVRGGAPRPRIVKRVLDGLNDDPARAWTAADMAE 236 Query: 265 QLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLG 324 S R LQ F +G P+ L IRL+ +L +TV + A +WGF H G Sbjct: 237 LAGTSVRRLQEGFREYVGRSPSECLLDIRLSRADADLR-ALEPGVTVSEVAARWGFTHAG 295 Query: 325 QFATDYQQLFSEKPSLTLH 343 +F+ Y++ + + PS + Sbjct: 296 RFSAAYRRRYGKSPSELIR 314 >UniRef50_B9JJ57 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JJ57_AGRRK Length = 331 Score = 190 bits (482), Expect = 9e-47, Method: Composition-based stats. Identities = 57/313 (18%), Positives = 119/313 (38%), Gaps = 7/313 (2%) Query: 35 RQTTDVYEHALTITA--WQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVW 92 + D E + ++ + L F E+ + + + V R LR Sbjct: 12 FRGNDADEFSEILSRCKAPARVEALRDAGFSAEYDFVAAEALGVGRAAYQGGLRFHQKAE 71 Query: 93 PNSFWFGIPATRGE--QGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVIT 150 + F +P + + + ++ D L ++++++ + Sbjct: 72 DSKFLIYVPLSGAAMISSSNRHHVSEPGKGTIIDMTSLSDVVIEGDREHLSLIINQNEVV 131 Query: 151 RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLG 210 R + + + + +++ + A ++ L PA L Sbjct: 132 RLLSAMLE-QPISGSIDLAPEFDLRLEAGLAFSRVTTILATGLNDDASLLQSPAALSCLS 190 Query: 211 DNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSR 270 L+ + + A + S R + RA +++ N+S+P+++ D+ V Sbjct: 191 TGLIHLLLENVPHRFSGALARQPALPS-PRHIRRAIDFMQANLSQPISIGDIAQASQVGI 249 Query: 271 RTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDY 330 R+LQ F G+ P A+L +R+ A R+L+ + +V A +WGF HLG+F+ DY Sbjct: 250 RSLQEGFKRFKGMSPMAYLANLRMEAAHRDLVMANP-ATSVAAIAQKWGFTHLGRFSGDY 308 Query: 331 QQLFSEKPSLTLH 343 ++ + PS TL Sbjct: 309 RKSYGCLPSHTLR 321 >UniRef50_A1K6W1 Putative AraC-family transcriptional regulator n=4 Tax=Proteobacteria RepID=A1K6W1_AZOSB Length = 341 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 67/334 (20%), Positives = 111/334 (33%), Gaps = 13/334 (3%) Query: 21 LKLTPKVEVDNVHQRQTTDVYEH----ALTITAWQ-QIYDQLHPGKFHGEFTEILLDDIQ 75 + +T DV E A + Q+ D+ L + Sbjct: 10 FAPPADPALARFPLFETRDVDEARVRGAQVFCDHKLQLLDRHSS--IDARMCFKRLRGVG 67 Query: 76 VFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAE--IATRPGGTEFELST 133 + R G + + +P + E G + S+ F L Sbjct: 68 IGRMTYGAHVAVEPGCLEDFLLVQMPLSGAEILRSGDIVVNSSRRIATVASPQRPFSLRH 127 Query: 134 PDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATF 193 L V + DV+ R + L + + + ++ +A Sbjct: 128 EAGTEKLFVRIDRDVLERHCLQHLG-HALRQPLEFRLDMPLDTAAGQQWMRALRWLVAEL 186 Query: 194 CENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSY---RRLLSRAREYVL 250 + + +L + +ML QP +E + + + R Y+ Sbjct: 187 DSVADGEVITSRYPLLAAQFEQMLISMLLVCQPHNYSEQLQADAPSIAPAFVKRVERYIE 246 Query: 251 ENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMT 310 +N EP+T++DL VS R+L F P L+ +RL VR L+ T Sbjct: 247 DNAHEPLTIVDLAAHAGVSSRSLFAGFKRYRDTTPMLHLREVRLRRVREALLEGRPGQTT 306 Query: 311 VKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 V AM+WGF HLG F Y++ F E PS TL + Sbjct: 307 VTSEAMRWGFSHLGHFTAAYKRRFGESPSETLAR 340 >UniRef50_B6B515 Transcriptional regulator, AraC family n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B515_9RHOB Length = 332 Score = 189 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 60/320 (18%), Positives = 115/320 (35%), Gaps = 9/320 (2%) Query: 30 DNVHQRQTTDVYEH----ALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLAL 85 Q + D+ E A + G F + + + G A+ Sbjct: 2 RAWRQFHSRDIDEARTLVAQKFCDHRLRPAGKSRG-FGTCHNHVPGRSLSLNYLCYGSAV 60 Query: 86 RQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSA--EIATRPGGTEFELSTPDDYTILGVV 143 + N + +P + G+ +GS + +++ D +L + Sbjct: 61 QIDPGELQNFYLVQMPLSGAAVVANGTGAVGSGIGQATVLNPTRATQMTWQADCRMLLLQ 120 Query: 144 LSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQP 203 + D + A ++ + +A F+ AT + Sbjct: 121 IDRDALHGIAERASGLPLSEPVVFDTAAPIGTGPLHGWARQFIACVRATDAQAGFGHWGA 180 Query: 204 AVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLC 263 ++V+ + L++ + + + + S + + RA++Y+ N +EP+TV + Sbjct: 181 LQQQVIEEQLILGLLTHQQSNIHHLLTQRAPLGSSLQ-IRRAQDYIHANAAEPLTVSAIA 239 Query: 264 NQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHL 323 + S RTLQ F G+ P +L+ +RL+ R L+S V A GF HL Sbjct: 240 AEAGCSIRTLQAGFRQHFGLTPVEYLRDLRLDLARYLLLS-RPAGTPVSSIAYDSGFSHL 298 Query: 324 GQFATDYQQLFSEKPSLTLH 343 G+F+ Y+ F E PS T Sbjct: 299 GRFSQLYRARFGELPSTTRA 318 >UniRef50_B8ESU5 Transcriptional regulator, AraC family n=1 Tax=Methylocella silvestris BL2 RepID=B8ESU5_METSB Length = 327 Score = 189 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 101/287 (35%), Gaps = 4/287 (1%) Query: 63 HGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSA--EI 120 G + L ++ + G + ++ + + + + Sbjct: 43 RGYLRHLSLGNVDLSSLGFGSEAVVEGAAPAHYYYIQMVLSGQLGLESQGNSVVVDCKSL 102 Query: 121 ATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKA 180 A + L +D L V + DV+ R+ + V + S + Sbjct: 103 AVINPSRKLSLHHSEDCRKLIVRIRSDVVERELANILGSP-VRDPVNFVSTMGADGPGLR 161 Query: 181 ALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRR 240 L + + V + + L A+ + + H Sbjct: 162 RLIRTIDYVCQEVDDPFSRCETVHVYERIEGLLCSAILTGVPNDYSEEISRLGEHNG-PS 220 Query: 241 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE 300 L RA YV +SE +++ DL N S RTL F+ P ++KRIRL RRE Sbjct: 221 YLRRAERYVKSRLSETISIDDLVNASGASMRTLYKVFNTHHNATPMGYVKRIRLEHARRE 280 Query: 301 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 L + TV + AM G HLG FA DY++++ E PS TL + + Sbjct: 281 LENIDGSVRTVAEVAMAVGMEHLGNFAADYKKIYHELPSETLRRNRQ 327 >UniRef50_Q0K462 Transcriptional regulator, AraC-family n=1 Tax=Ralstonia eutropha H16 RepID=Q0K462_RALEH Length = 314 Score = 189 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 85/309 (27%), Positives = 145/309 (46%), Gaps = 4/309 (1%) Query: 36 QTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLD-DIQVFREYTGLALRQSCLVWPN 94 +H L + + Y Q PG++ G ++ D D+ V+RE + + + Sbjct: 8 SFASPEDHRLGLPELNKRYLQTGPGRYAGHLQQVRPDADLLVYRERLDVPILREGWTRKG 67 Query: 95 SFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQAN 154 F I + + +G+ +A GG E+ + +P LG+VL++ + A+ Sbjct: 68 LRMFAIALPVESRATFHGRAVGA-AVAHLAGGREYSVQSPGPSEHLGIVLADSTFSIHAD 126 Query: 155 FLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLL 214 +L R+ + LE + L + L +N L PA R L D++L Sbjct: 127 YLGGVPRLA--WTGEPLLEAPAAARERLASRILCCLLGATKNVSALVCPAARMTLRDDVL 184 Query: 215 MAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQ 274 + +L +A+ I+ +Y ++ R+RE++ N PV VL+L L VSRRT+Q Sbjct: 185 EHLFCLLIDAELPGRRRDITRLTYSDIVHRSREHLRANADRPVGVLELSGLLRVSRRTIQ 244 Query: 275 NAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLF 334 AF + G+ P +L+ IRL++VRR L + +TV AA +WGF H+ +FA +Y ++F Sbjct: 245 TAFMEVTGVTPQTYLRAIRLSSVRRLLRQTSADRLTVSQAAARWGFVHMSRFAAEYGRMF 304 Query: 335 SEKPSLTLH 343 PS Sbjct: 305 GCLPSEAPR 313 >UniRef50_B9JJ58 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JJ58_AGRRK Length = 326 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 60/328 (18%), Positives = 107/328 (32%), Gaps = 8/328 (2%) Query: 21 LKLTPKVEVDNVHQRQTTDVYEHALTI--TAWQQIYDQLHPGKFHGEFTEILLDDIQVFR 78 L L P + ++ D + + A I Sbjct: 3 LPLKPAMTEGSLR-YSGKDPDGLSEALSTPASTIRVKTTAKKTISYRCEFASAGSISFGL 61 Query: 79 EYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLG--SAEIATRPGGTEFELSTPDD 136 R + F IP + + G G ++ Sbjct: 62 CTYDGDFRLTRETDSGKFLMFIPLSGEASFNTSKETFGSRPGRGFITNGIPYGDMHIMGP 121 Query: 137 YTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCEN 196 L V+ + + + + L V L +++ L + + ++ Sbjct: 122 RQHLIVIHDRNEMINRLSGLLETP-VGGNLNFHPDIDLAAGPGRILQDLAEATFSGLAQD 180 Query: 197 PENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEP 256 P L + + + A I+ R + RA +++ N+ P Sbjct: 181 TALRQSPLALSNLTGAITNLILETVPHRFSEALAR-IAPAPAPRHVRRAIDFMQANLMRP 239 Query: 257 VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAM 316 +++ D+ +VS R+LQ F P A+L+ +RL A REL +TV A+ Sbjct: 240 LSIADMAAVCNVSVRSLQKGFRDFKMTTPMAYLQHLRLEAAHRELQEATP-GLTVAAIAL 298 Query: 317 QWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 +WGF H G+FA DY+ F + PS TL + Sbjct: 299 KWGFTHFGRFAVDYRLRFGQLPSQTLRR 326 >UniRef50_A4EX82 Transcriptional regulator, AraC family protein n=2 Tax=Roseobacter RepID=A4EX82_9RHOB Length = 358 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 54/325 (16%), Positives = 116/325 (35%), Gaps = 11/325 (3%) Query: 26 KVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPG----KFHGEFTEILLDDIQVFREYT 81 K ++ QT D+ + + + L P F + D+ + Sbjct: 33 KEPLNAFPLFQTRDIDRARHAVASKFCTHS-LSPAKSAEGFDACHNHLAWSDVSLNYLSY 91 Query: 82 GLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAE--IATRPGGTEFELSTPDDYTI 139 G ++ + +P G + + + ++ + Sbjct: 92 GCEVKIEPGELERFYLIQVPLQGRAIVKNGRVEVRADRSCATVLNPTRDTQMVWGEGCCK 151 Query: 140 LGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPEN 199 L + ++ + + QA L ++ + A++++ + + E Sbjct: 152 LLLQINREALHLQAEELLQR-KLSEAVLFAPAVDMRNPGLLHWVNDLFSVVGLAEEGEAF 210 Query: 200 LHQPAVRK-VLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVT 258 + A+R+ + ++L++ + E + L RA+E++ N++EP+T Sbjct: 211 SGRAALRQPRMEESLILGFLTQQPSSISHELREE-RPDALPHQLRRAQEFINSNLTEPLT 269 Query: 259 VLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQW 318 + ++ S R+LQ F G+ P +L RLN L+ + + V A Sbjct: 270 LAEISKAAGCSLRSLQVGFRKHFGVTPMGYLNCQRLNHAHY-LLQSRTGARRVSTVAFDA 328 Query: 319 GFWHLGQFATDYQQLFSEKPSLTLH 343 GF HLG+F+ Y++ F P TL Sbjct: 329 GFSHLGRFSIAYRKAFGCSPKETLQ 353 >UniRef50_B3Q2C8 Putative transcriptional regulator protein, AraC family n=9 Tax=Rhizobium RepID=B3Q2C8_RHIE6 Length = 344 Score = 187 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 110/291 (37%), Gaps = 7/291 (2%) Query: 53 IYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGS 112 Q + + I LD V + A + +PA+ Sbjct: 40 DLAQHDSRSLNSRCSRISLDGFGVADAHHEGAFSVMIDSPVDVVTVFLPASGNAVFHWSG 99 Query: 113 QCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSAL 172 Q + S + + L + + + + + + + + L+ Q L Sbjct: 100 QQVESPHV----ANAPLNARQDGIRSQLSLTIDTQSLRDKLSRMLDRT-ISGNLQIQPTL 154 Query: 173 EVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAES 232 ++ + A P+ L D + + Sbjct: 155 DLASSAGTLMRELALSAHRGLSAGGALRQCPSAYSSLLDAIEYLLIESCMHRYTDELRRP 214 Query: 233 ISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRI 292 S R + RA E++ E+M++P+++ D+ VS RTLQ+ F P L+ + Sbjct: 215 -SPSPTPRHVKRAMEFMEEHMAQPISLNDIAAAAKVSVRTLQHGFRQFRNTSPTMHLRDL 273 Query: 293 RLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 R+ A R+EL+ ++ ++V + A++WGF HLG+FA +Y++ + E PS T+H Sbjct: 274 RMCAARQELLQNGAK-ISVSEIALKWGFTHLGRFAAEYKRRYGELPSKTVH 323 >UniRef50_UPI00006A2B14 UPI00006A2B14 related cluster n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI00006A2B14 Length = 303 Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats. Identities = 67/305 (21%), Positives = 115/305 (37%), Gaps = 31/305 (10%) Query: 39 DVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWF 98 D + HA + W+ Y Q+ G ++ FRE + Q + Sbjct: 30 DAHLHASALQGWKNTYSQISAGALETSLMQLTSARSHAFRERISQRVVQHGETPRDKVCL 89 Query: 99 GIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHN 158 IP + + + + + Sbjct: 90 AIPVGMRGVASVQGREAD--------------------------TIQREFFEDMLESTPH 123 Query: 159 PDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMG 218 + +LR Q ++V + A + N + P L +L + Sbjct: 124 AQEIGALLR-QPVIKVLPKRLAECRRRLLAMFTEAMLNDDLGETPERENELEQAMLGELM 182 Query: 219 AMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFH 278 +L + + S ++ ++ + + + N +V++LC +L VSRRT+QN+F Sbjct: 183 RLLSDPECDWHQRPPS-TTHSFIVEKCHQLTMLNAFNAPSVIELCQRLQVSRRTIQNSFR 241 Query: 279 AILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKP 338 + P +L+ +RLN VRREL+ +++V DAA WGF+HL FA DYQ+LF E P Sbjct: 242 NVTETTPLNYLRCVRLNGVRRELM---FTTLSVGDAAANWGFFHLSHFAADYQELFGELP 298 Query: 339 SLTLH 343 S T Sbjct: 299 SQTKR 303 >UniRef50_Q0S024 Transcriptional regulator, AraC family protein n=2 Tax=Rhodococcus jostii RHA1 RepID=Q0S024_RHOSR Length = 341 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 50/317 (15%), Positives = 116/317 (36%), Gaps = 11/317 (3%) Query: 36 QTTDVYEHALTI--TAWQQIYDQLHPG-KFHGEFTEILLDDIQVFREYTGLALRQSCLVW 92 + DV E + ++ G FH + ++ + + C Sbjct: 29 HSEDVEEAVAGVGEVFHPHELTRVGAGSGFHADLKAVVAGSMVSGQLRYNNNTDLYCPAI 88 Query: 93 PNSFWFGIPATRGEQGFIGSQ--CLGSAEIATRPGGTEFELSTPD--DYTILGVVLSEDV 148 + + IP + G + + G++ + TP + + L Sbjct: 89 -DGYHVNIPMSGRLLSESGGEETAVEQGNAVVYSTGSDARVLTPRTSQLHVFAMKLDRST 147 Query: 149 ITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKV 208 + L + V ++ L++ + A V + E + P + Sbjct: 148 MQTAIQDLLDRP-VSRPVQLHGGLDLTTVNGRAWRRLVLDTYRSQIE-GTFMANPLLAAP 205 Query: 209 LGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHV 268 L ++ + + + E + ++ ++ A EY+ + + P++ + ++ V Sbjct: 206 LTYSIAVGLLNLTEHQYAEELTRP-AMRTAPAPINEAVEYITAHAATPLSPELIAREVGV 264 Query: 269 SRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFAT 328 R LQ F L P +++ R+ +L++ +++ TV A +WGF+H G+F+ Sbjct: 265 GVRALQRGFREYLDTTPIEFIRNARMKRAHEDLMAADAETDTVSGIASRWGFYHYGRFSQ 324 Query: 329 DYQQLFSEKPSLTLHQR 345 +Y++++ PS TL Sbjct: 325 EYRRIYGVSPSHTLRSA 341 >UniRef50_Q3LUX0 Transcriptional activator (Fragment) n=2 Tax=Pseudomonas fluorescens RepID=Q3LUX0_PSEFL Length = 330 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 64/275 (23%), Positives = 119/275 (43%), Gaps = 5/275 (1%) Query: 74 IQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGS--AEIATRPGGTEFEL 131 + V T + + +S+ +P ++ + L S + L Sbjct: 55 LGVIEYGTDVTIDIEDAEHFSSYSLSLPLVGEQELSKNGERLSSNRDQGVIISPNEHQVL 114 Query: 132 STPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALA 191 + D L VV++ ++ L + LR +S ++ + A+ W + +A Sbjct: 115 AISGDCRKLQVVITRAAMSESLEGLLQRP-IDAPLRFESVMDAVDGAPASWWRMARYFIA 173 Query: 192 TFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLE 251 + E Q A + L +L+ + + + + L+ RAR+++ + Sbjct: 174 ELERSSELYEQAAFTRDLESSLIKGLILAQPNNYSEELRDVLGVKLPHYLI-RARQFIHD 232 Query: 252 NMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTV 311 N E + + DL VSR L +AF + P A+LK+ RL AVR+E++ T+ Sbjct: 233 NAREALHLEDLEAAAGVSRFKLFDAFRKYFALSPMAYLKKHRLGAVRQEILE-QGSIRTI 291 Query: 312 KDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 + A+ WGF HLG+F+ +Y++LF E PS TL ++ Sbjct: 292 SEIALGWGFTHLGRFSAEYRKLFDESPSQTLQRKR 326 >UniRef50_Q05335 XylDLEGF operon transcriptional activator 3 n=35 Tax=Bacteria RepID=XYLS3_PSEPU Length = 331 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 104/293 (35%), Gaps = 13/293 (4%) Query: 59 PGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGE--QGFIGSQCLG 116 G + + R G ++R + + + +G+ Sbjct: 39 SGCPEASLNHSTFGSLDLCRISYGGSVRVTSPGLETCYHLQVLLKGHCLWRGYGLEHYFS 98 Query: 117 SAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKE 176 E+ +L+ +D V L V+ R + + + +R + + Sbjct: 99 PGELLLINPDDRADLTYSEDCEKFIVKLPSVVLDRACSESYW-HKPSEGIRFTTRHNL-- 155 Query: 177 QHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQ 236 L GF+ E P V++ + + ML T Sbjct: 156 ---QQLDGFINLLGLVCDEAEHTNSMPRVQEYYTGIIATKLLEMLSSNVSRETFSEGCPS 212 Query: 237 SYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNA 296 R +++ +N+ + +++ L +S R+L F G P +++ +L Sbjct: 213 -----FERVVQFIEDNLKQSISLERLAELALMSPRSLYTLFEKHAGTTPKNYIRNRKLEC 267 Query: 297 VRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREW 349 +R L P + +V + A+ +GF+H G+FA +Y+ F E PS TL +R +W Sbjct: 268 IRARLSDPNANVRSVTEMALDYGFFHTGRFAENYRSTFGELPSDTLRRRKMKW 320 >UniRef50_Q2G526 Transcriptional regulator, AraC family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G526_NOVAD Length = 319 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 64/317 (20%), Positives = 113/317 (35%), Gaps = 7/317 (2%) Query: 28 EVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLD-DIQVFREYTGLALR 86 ++ + DV A ++ Q Y Q+ PG F G + V E + Sbjct: 7 KLPTFLRTVHEDVDAQARSLFTLDQNYMQVDPGPFCGTMATCDFGTGLVVSFEQVNKRVL 66 Query: 87 QSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSE 146 Q V + + GE G E LS + + + ++ Sbjct: 67 QVAAVPFGTAQVALILEAGEPTTHNQVGRIRNAGVVMAPGAEARLSAGANTRVCLISIAG 126 Query: 147 DVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLH-QPAV 205 + A ++ + + AL G V +A F + A Sbjct: 127 E-----AADHLRSRYNFDPDSLRADIFLDPAETTALRGLVTEAYQRFSSPQADRSFDQAS 181 Query: 206 RKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQ 265 + +L + ++ L+ A + N+ PVTV L Sbjct: 182 AAAFHEAVLSVTAWTCASSARTQNQHRVAGDCRTTALTAAIRLIDHNLHNPVTVEWLART 241 Query: 266 LHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQ 325 L VSRR+L+ AF P ++K +RLN++R+ L P + +++ D A + G WH G+ Sbjct: 242 LGVSRRSLEQAFGEAFDTSPGRYIKVLRLNSLRQMLRDPSNAEVSIGDLAARCGLWHQGR 301 Query: 326 FATDYQQLFSEKPSLTL 342 A+++++LF PS Sbjct: 302 LASEFRELFGVLPSEAR 318 >UniRef50_C7N068 DNA-binding domain-containing protein, AraC-type n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7N068_SACVD Length = 338 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 107/298 (35%), Gaps = 6/298 (2%) Query: 53 IYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFI-- 110 + L + + + ++ + G R S + + + Sbjct: 41 TLEPLAAKRLDARLNAVQIGEVTLGYLTYGTETRISLPPSGQWYHVNVTLAGSSRIARTD 100 Query: 111 --GSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRN 168 + G A + D G+ + + + L +V + Sbjct: 101 GERGETEGMRGAAVLLPHRTQTIEWAHDAAQFGIKIPRTALETHLSDLTRT-QVTGPVDF 159 Query: 169 QSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMV 228 +++ + L + + E+ R+ + ++ + M Sbjct: 160 GLIIDLTSRAGRGLLRCLDFVRREWDEDGVLAQHGGTRRHVEAMIMTNLL-MAASGPHQN 218 Query: 229 TAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAW 288 S L RA +Y+ E+ E T+ DL VS RTLQ F LG P + Sbjct: 219 LLRQEHTTSRPAALKRALDYIHEHAHELPTLTDLTAAAGVSARTLQLQFLRNLGCTPLQY 278 Query: 289 LKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 L+ +RL A R EL+ P S +TV D A WGF++LG+F++ Y+ ++ E PS TL + Sbjct: 279 LRDVRLRAARAELLHPRSADVTVTDVATSWGFYNLGRFSSLYRSVYGETPSETLRRAK 336 >UniRef50_C6B4J9 Transcriptional regulator, AraC family n=8 Tax=Rhizobium RepID=C6B4J9_RHILS Length = 340 Score = 184 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 53/319 (16%), Positives = 107/319 (33%), Gaps = 8/319 (2%) Query: 31 NVHQRQTTDVYEHALTITAWQQIYDQLHPG--KFHGEFTEILLDD-IQVFREYTGLALRQ 87 TD E ++ ++ + G + + + + V + Sbjct: 25 RETAHSGTDPDELSVVLSTPNSPIKVVAEGNMPIAYHCNFVSVGEEVTVADCTYEGTILI 84 Query: 88 SCLVWPNSFWFGIPATRGEQGFIGSQCL--GSAEIATRPGGTEFELSTPDDYTILGVVLS 145 + +P + + A G G+ + Sbjct: 85 RREAPSDRMIVFLPMAGNASFEGMREQIYSVPARGTILEAGRAAGARLFGPRRHFGLFVD 144 Query: 146 EDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAV 205 + IT + + + +++ L V N P Sbjct: 145 QAKITSHLTHMFERT-ISGDVDFHPHIDLTTGPGFVLQQLVSSLHRGLSRNGPLQRSPLA 203 Query: 206 RKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQ 265 L D + + A + R + A +++ E+++EP+++ D+ Sbjct: 204 AGSLCDAAIYLLLETCPNRYSNELALPAPAPAP-RHVKWAIDFMQEHVAEPISLNDIAMA 262 Query: 266 LHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQ 325 VS RTLQ F P ++L +R+ A R+L+ + + + D A++WGF HLG+ Sbjct: 263 AKVSVRTLQQGFRQFRDTTPMSYLHDLRMAAAHRDLLESDRKQV-IADVALRWGFSHLGR 321 Query: 326 FATDYQQLFSEKPSLTLHQ 344 FA +Y++ F + PS TL + Sbjct: 322 FAAEYRKRFGQLPSQTLKR 340 >UniRef50_A9BUW9 Transcriptional regulator, AraC family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BUW9_DELAS Length = 392 Score = 184 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 70/349 (20%), Positives = 127/349 (36%), Gaps = 21/349 (6%) Query: 9 LHHLYHEPLPENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIY---DQLHPGKFHGE 65 + H H PLP + ++ D+ E ++ + + Sbjct: 54 MEHAMHTPLP----------LQRYRLFESHDMDEARESVARVFCPHGLGMLRPRAELDAC 103 Query: 66 FTEILLDD-IQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLG--SAEIAT 122 L + + G + + F IP + G+Q + + Sbjct: 104 HHSAPLSRNVSLNYVQYGPGVHIEPGYLRDFFLLQIPLRGSAEIRCGAQQVDATPRLASL 163 Query: 123 RPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAAL 182 R + DD L V ++ + + L L + + + A L Sbjct: 164 RSPTEPLSMRWADDSPHLIVRMARPALVARLEALLQAPA-GRPLVFDLGVPLDQPALAPL 222 Query: 183 WGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLL 242 F+ T A+ + + LL ++ + A R + Sbjct: 223 VHFIDCLRHTLDAGNALQATQALAQHAEEYLLTSLLMSATHSHSRALAGDSRRSLLPRGV 282 Query: 243 SRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELI 302 +A+EY+ + +P+++ D+C + S RTLQ AF G+GP +L+++RL+ VR EL Sbjct: 283 RKAQEYMQAHADQPLSLADVCREAGCSARTLQAAFRQHAGMGPMDFLRQLRLDRVRAELQ 342 Query: 303 ----SPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 + V+D A ++GF HLG FA Y+ F E PS T +R++ Sbjct: 343 AAKGPGAAAGSGVRDVAQKYGFLHLGHFAAQYRSRFGELPSETASRRVQ 391 >UniRef50_B0SX63 Transcriptional regulator, AraC family n=1 Tax=Caulobacter sp. K31 RepID=B0SX63_CAUSK Length = 374 Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats. Identities = 66/333 (19%), Positives = 114/333 (34%), Gaps = 5/333 (1%) Query: 20 NLKLTPKVEVD-NVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFR 78 + P V R+T +E QL P G L D+ Sbjct: 44 SFGARPSPASPGEVVLRETEGPHEVWAHAAGRNLAVTQLTPDPCRGHLLRAGLGDMGFDA 103 Query: 79 EYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYT 138 LR ++ +F F + + +I P G E + Sbjct: 104 GAFSGDLRVRGVMARKAFSFVSVLEQDGVLNQWGHRIEEGDILAIPPGDELDGRFQGHTA 163 Query: 139 ILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPE 198 V ++ ++A ++A+ A V Q + Sbjct: 164 YAVVTAPWGLVMQRAEAFEW--LADPGFWTEAAVYSPPPEARAACRRVLQGCSGVLRAMG 221 Query: 199 NLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLEN-MSEPV 257 P+ L +L + L + + + + R++ A +++ + V Sbjct: 222 AAPPPSAVSFLRHEILDGVLTALSQVK-VEGGRRHGLLNAARIVRGAEDFLDGGGARQAV 280 Query: 258 TVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQ 317 + D+C L++SRRTL AFH L + P A+L+ ++A R + + TV A+ Sbjct: 281 QIEDICRALNISRRTLYRAFHDQLDVSPKAYLRLKNMSAARARFLGAGVRPTTVTQVALD 340 Query: 318 WGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 GFW LG+F+ Y+ +F E PS TL G Sbjct: 341 HGFWELGRFSGAYRAMFGESPSETLRGAQGAPG 373 >UniRef50_A3YU12 Transcriptional regulator, AraC family protein n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YU12_9SYNE Length = 318 Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats. Identities = 75/301 (24%), Positives = 130/301 (43%), Gaps = 6/301 (1%) Query: 53 IYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGI---PATRGEQGF 109 QL G+ G L +++ R L + + + P+ G Sbjct: 2 RLLQLSNGRLSGSLVIRRLGPLRLLRLQANRCLHVAGSKPLDQRLVCLNLPPSGGGAPLR 61 Query: 110 IGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQ 169 +G + E LSTP+ + V+L+ +TR ++ + D R Sbjct: 62 AHGTTIGPDVLFGLDPRAEVHLSTPEQMDLAVVMLTPSTLTRWSSGQGDRDLEAAPFR-C 120 Query: 170 SALEVKEQHKAALWGFVQQALATFCENPE-NLHQPAVRKVLGDNLLMAMGAMLEEAQPMV 228 + L + + L ++ + L E P + P+ + G LL + LE+ + Sbjct: 121 NCLPIDVDSRTQLQRWLLKLLPLQAETPSVPVVSPSAPEAAGGGLLPLLVDALEQGLR-L 179 Query: 229 TAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAW 288 + S + +++ + +++V E+ EP+++ LC Q +V RR+L F LG+GP A+ Sbjct: 180 RGVTDSPPARIQMVKQLQQWVEEHPLEPISLDGLCRQAYVGRRSLILGFKEHLGMGPMAY 239 Query: 289 LKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMRE 348 K RL+ VRR L+ ++T+ A WGF + G FA DY++LF E PS TL R Sbjct: 240 FKLQRLHGVRRGLLEAAPGAVTISGLAASWGFLNPGHFARDYRRLFGELPSATLSGRFSP 299 Query: 349 W 349 Sbjct: 300 A 300 >UniRef50_B3Q6V1 Transcriptional regulator, AraC family n=2 Tax=Rhodopseudomonas palustris RepID=B3Q6V1_RHOPT Length = 332 Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 104/295 (35%), Gaps = 7/295 (2%) Query: 58 HPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLG- 116 F + L DI+ + L + + + +G++ + Sbjct: 41 DRDGFRARLNFVRLSDIE-MAYSWATVPSRLRLPPDDFVGLQLALSGSAITMVGNRRVAT 99 Query: 117 -SAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVK 175 + + P G + ++ L + + + R L + L + + Sbjct: 100 NARQSCICPPGQGRDYQFDAEFEQLFLGVRLSALERTLAGLLG-GKPNAPLEFEPVADND 158 Query: 176 EQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISH 235 H L T +L + + L +A + Sbjct: 159 YPHSENLRQLTLFFGGTLNATKVSLPSQYLAE-LEQATAVAFLHACKHNFS-SYLGVAEK 216 Query: 236 QSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLN 295 + R + EY+ N +E +T+ L +S RT+ AF G P A+ KR+R+ Sbjct: 217 DAASRHVKLVEEYIEANWNESLTIEKLVELTGMSARTVFKAFQRTRGYSPMAFAKRVRME 276 Query: 296 AVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 VR+ L+ + +V A+Q GF HLG FA DY++ F E PS TL + R G Sbjct: 277 RVRQLLLEAGGDA-SVGAIAVQCGFPHLGHFAKDYRKTFGENPSDTLARGRRFRG 330 >UniRef50_C6B4N8 Transcriptional regulator, AraC family n=13 Tax=Rhizobium RepID=C6B4N8_RHILS Length = 333 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 102/259 (39%), Gaps = 7/259 (2%) Query: 94 NSFWFGIPATRGEQGFIGSQCL---GSAEIATRPGGTEFELSTPDDYTIL-GVVLSEDVI 149 +P + G GS + G ++ + ++ ++++ VI Sbjct: 78 EYLSIVVPRSGGMGVTYGSSRIAEAGQGKLLLYNNFEPNSVIMHGQSNVIDELLINWPVI 137 Query: 150 TRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVL 209 + L L++ + + + ++ ++ L P + Sbjct: 138 LQTIGQTFEMP-FSGSLDLLPELDLSKPAGRLIGNLTETIISGMRDDGPLLQSPIAMAHM 196 Query: 210 GDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVS 269 L + ++ E+ R + RA E++ N+ +P+T+ + VS Sbjct: 197 TQALADLVVRLVPHRLSH-FLENRPALIAPRHVRRAIEFMHANIDQPITMPKVAEAAGVS 255 Query: 270 RRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATD 329 R L+ F A G P +L +RL A R++L+ P S+ T+K ++WGF+H G+F+ Sbjct: 256 SRALETGFRAFRGTSPAVYLLTLRLRAARQDLLDPESKE-TMKAICLKWGFFHFGRFSAV 314 Query: 330 YQQLFSEKPSLTLHQRMRE 348 Y+ + E PS T + +R Sbjct: 315 YKTTYGEYPSDTRKRVIRR 333 >UniRef50_A5V4X1 Transcriptional regulator, AraC family n=2 Tax=Sphingomonas wittichii RW1 RepID=A5V4X1_SPHWW Length = 343 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 105/324 (32%), Gaps = 11/324 (3%) Query: 29 VDNVHQRQTTDVYEHALTITAWQQIYD-QLHPG--KFHGEFTEILLDDIQVFREYTGL-- 83 + + + TTD+ E ++ +D ++ G + L + G Sbjct: 19 LSRLARLVTTDIDEVHDHMSRMFCPHDLRIEGGNPPIAFRHHQASLKSVTFNATDYGNPY 78 Query: 84 -ALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLG--SAEIATRPGGTEFELSTPDDYTIL 140 + + + + Q + + ++ + + + + Y Sbjct: 79 GRVVVNIPPANALYLVQFSLSGVAQIAQENSTIELSPGQMCVLDPDAQVKQTFGEGYKHF 138 Query: 141 GVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENL 200 V +S+ I Q AA V+ Sbjct: 139 TVKMSKCGIEAVLAQELGFRPRELHFSAQPVRLQGPA--AAFAHLVRTICDDLDSGIAGF 196 Query: 201 HQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVL 260 + + L + A + + S + + R +Y+ E+ +P+++ Sbjct: 197 THARACGTVEEALQRLLLAAVPHNYSELFDAPPSSPA-PYYVRRVEDYIREHSRDPISLE 255 Query: 261 DLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGF 320 ++ VS R+L F P +LK RL+ R+L ++V + A+ GF Sbjct: 256 EMIAVSGVSARSLHAGFRRFRDTTPMVYLKNHRLDLAHRQLKIAADDGLSVTEVALACGF 315 Query: 321 WHLGQFATDYQQLFSEKPSLTLHQ 344 HL +FA DY F E+PS TL + Sbjct: 316 THLSKFARDYLDRFGERPSATLKR 339 >UniRef50_A5V484 Transcriptional regulator, AraC family n=2 Tax=Sphingomonadaceae RepID=A5V484_SPHWW Length = 330 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 47/291 (16%), Positives = 98/291 (33%), Gaps = 5/291 (1%) Query: 58 HPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQC--L 115 P + + + I + Q+ G + F + + G + Sbjct: 41 DPSRMSAKLSCIGVAPTQIVDIQYGTDVWIDPGELDAHFLVHASIEGTSEVWAGGSEGSI 100 Query: 116 GSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVK 175 + G + L V ++ + N L E Sbjct: 101 RPDNLHISSPGAPIRIHMTPACRHLTVRIARSAFEDYLTRIMNIPA-NRPLVFYPGRECG 159 Query: 176 EQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISH 235 + + + P + ++ L++ + + Sbjct: 160 RELPVVWRNLLNHLIDQTSHGPMLMSNNRTQRQY-SMLMIELLLSNYCNSYSDQIALYGN 218 Query: 236 QSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLN 295 + RAR+ + + + ++V DL NQ+ VS R+LQN F LG+ P +++R RL Sbjct: 219 DISPWHVRRARDIIHASFDDSISVTDLANQVGVSVRSLQNGFRQFLGLTPVEYVRRHRLE 278 Query: 296 AVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 + L+ ++ +V + ++ G + G++A Y+Q + +PS TL R Sbjct: 279 KLHSALMDASPEA-SVTELMLECGIVNFGRYAQYYRQQYGCRPSETLRSRR 328 >UniRef50_Q13EW4 Transcriptional regulator, AraC family n=5 Tax=Rhodopseudomonas palustris RepID=Q13EW4_RHOPS Length = 329 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 65/324 (20%), Positives = 113/324 (34%), Gaps = 11/324 (3%) Query: 26 KVEVDNVHQRQTTDVYEHALTITAWQ----QIYDQLHPGKFHGEFTEILLDDIQV-FREY 80 + T+D E A + W + ++ G F I L DI + F Sbjct: 7 SEPLSEFRALDTSDPVELAQAL--WTVYGVRHFEAPPAGHFRIRGNFIQLQDIALGFTSG 64 Query: 81 TGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTIL 140 G+ + + + S + G + Y L Sbjct: 65 HAPLTVDFPEADFARLQIGLAGQASTRSAGVTTAVDSRQGCITSPGRTARTEFGETYEQL 124 Query: 141 GVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENL 200 + + + R+ + L + + + A A L + + L Sbjct: 125 LLRVKNGALERKLSALLGT-KPKRTIEFEPAATNDLPQAANLRRMIAFVSSQINSPSAPL 183 Query: 201 HQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVL 260 V L D + + + + E+ S + + + + EY+ N +P+T+ Sbjct: 184 -PALVLAELQDAITLLLLSTYRHNFSR-FLEADSPTAAPKHVRKIEEYIEANWMKPITIE 241 Query: 261 DLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGF 320 L + +S R + F G P A+ K++RL R L +Q TV AA GF Sbjct: 242 TLVDLTGISARGVFKTFQRNRGYSPMAFAKQVRLQHARAMLTQGRTQ-TTVTAAAFACGF 300 Query: 321 WHLGQFATDYQQLFSEKPSLTLHQ 344 +LG FA DY++LF E+PS TL + Sbjct: 301 ANLGHFAKDYRELFGERPSETLGR 324 >UniRef50_C3KLK8 Probable transcriptional regulator protein, AraC family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KLK8_RHISN Length = 326 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 53/284 (18%), Positives = 109/284 (38%), Gaps = 5/284 (1%) Query: 65 EFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCL--GSAEIAT 122 + + + R + +L +P IG + + A Sbjct: 44 SYEFVAAGRVAFSRVASQGSLSIGQRDEVPKLLILLPLHGSACVKIGKESVISKPGHAAI 103 Query: 123 RPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAAL 182 G EL + L +V+ + I RQ + V L L++ + + Sbjct: 104 LDGNRLSELQVEKVRSHLSLVIDQRDIFRQLGTVLERP-VYGALDFVPELDLADGTGEII 162 Query: 183 WGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLL 242 + Q + + P L +++ + + ++ S + + Sbjct: 163 FKLSQIIAGSLGSDSGIPDMPHALSYLSGSIVSLLVDTVPHRFSGALSQGEWLPS-PKHV 221 Query: 243 SRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELI 302 RA +++ N+ P+++ D+ + R+LQ F G P ++L ++R+ A R+L+ Sbjct: 222 KRAVDFMHANLRAPISMSDIAGAAGIGVRSLQEGFKRFKGTSPISYLAQLRMEAAHRDLL 281 Query: 303 SPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 QS++V + A +WGF H+G+FAT+Y++ + PS R Sbjct: 282 EAD-QSVSVAEIARKWGFRHMGRFATEYRKCYGCPPSEARKGRA 324 >UniRef50_D0LFC4 Helix-turn-helix-domain containing protein AraC type n=2 Tax=Actinomycetales RepID=D0LFC4_GORB4 Length = 318 Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 62/282 (21%), Positives = 106/282 (37%), Gaps = 13/282 (4%) Query: 65 EFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCL--GSAEIAT 122 + LD + + R G A+ +C +P ++ IP T G L Sbjct: 46 TMRTVELDGVTIGRLTWGTAVSIACE-YPGAYEVNIPLTGRLHSRSGRDELVSTPGTGTV 104 Query: 123 RPGGTEFELS-TPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAA 181 G ++ D ++GV + + R+A+ +H + L ++V+ A Sbjct: 105 FTAGRASVITNWTADCEVIGVKFDAEYLEREADRIHATA-LRRRLTLPDQIDVQSDSGAT 163 Query: 182 LWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRL 241 +G V+ A E + L P V L + A + E Q + Sbjct: 164 WFGLVKALSAQVREPGDLLANPLVGPQLASAVSTAFLLSVS-----PEPERADPQLRPGM 218 Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 + R + + E+ + P ++ ++ S R LQ AF L P L IRL +L Sbjct: 219 VKRVLDALDEDPARPWSLAEMAGIAGTSVRRLQEAFAEYLERSPTRALADIRLARAHADL 278 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 ++ TV D A +WGF +FA Y++ + PS L Sbjct: 279 LTGTG---TVADVAARWGFSSPSRFAAAYRRRYGASPSAVLR 317 >UniRef50_A3K773 Transcriptional regulator, AraC family protein n=1 Tax=Sagittula stellata E-37 RepID=A3K773_9RHOB Length = 321 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 107/318 (33%), Gaps = 13/318 (4%) Query: 33 HQRQTTDVYEHALTITAW--QQIYDQLHP-GKFHGEFTEILLDDIQVFREYTGLALRQSC 89 Q+ D+ E + A +++ G+F + G + Sbjct: 5 RLFQSDDLDEARAVVAAKFCDHRLNRVSRSGRFDAVHNRAEGQATSLNYIQYGADVEIEP 64 Query: 90 LVWPNSFWFGIPATRGE--QGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSED 147 + + IP G G + + + + L + + Sbjct: 65 GELGSFYLVQIPLKGQAWIDNSAGDVETGPGLGSVLNPHRNASMRWREGCSQLLLQIDAQ 124 Query: 148 VITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRK 207 + R A L + + ++A++ + ++ + + + Sbjct: 125 QLNRVAERLIGRA-LSGPVTFRTAVDQRVPEVDKWVHKLRTCFSLAEKEAIYAKGNLHTQ 183 Query: 208 VLGDNLLMAMGAMLEEAQPMVTAESISHQSYRR---LLSRAREYVLENMSEPVTVLDLCN 264 L + + QP + ++ R + RA +Y+ N+ +TV D+ + Sbjct: 184 ALVE---EQLIEGFLLCQPSDLSGPLTKDIDRAGNLYVRRAMQYIHRNLGAAMTVGDIAD 240 Query: 265 QLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLG 324 L +S R+LQ +F A LG+ P +L+ RL L + ++ D G H G Sbjct: 241 ALGISPRSLQLSFKAELGMTPMQYLRDARLREAHAMLKTGSDMG-SIGDICEHVGIAHCG 299 Query: 325 QFATDYQQLFSEKPSLTL 342 +F+ +Y++ + E P T Sbjct: 300 RFSVEYKRRYGESPHETR 317 >UniRef50_B3Q2F7 Probable transcriptional regulator protein, AraC family n=4 Tax=Rhizobium etli RepID=B3Q2F7_RHIE6 Length = 321 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 54/280 (19%), Positives = 105/280 (37%), Gaps = 6/280 (2%) Query: 66 FTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSA--EIATR 123 I I V + L + +P + + + S Sbjct: 44 VHAITNGPIAVIAAHYEGDLTVQHRGPAEANIIMLPLHGRSVVTVDGRQIPSEGTRGVFV 103 Query: 124 PGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALW 183 + LG+ ++ D +TR+ N + L +++ + L Sbjct: 104 NSMSASTTQFIGPRKHLGLRIAHDELTRRLGCRLNTP-IRGSLDFSPEIDLSVGFGSLLV 162 Query: 184 GFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLS 243 V A + L P L + + + + ++ + + Sbjct: 163 QLVPVLYAGL-RDGTLLQSPIALHHLTETTMELLIEAAQHRYSSELCR-VAESPLPKAVK 220 Query: 244 RAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELIS 303 RA +Y+ N++ P+++ ++ VSRRTLQ+ F P A+L+ +RL V +EL++ Sbjct: 221 RAVDYMRANITRPLSLEEIATACGVSRRTLQSGFRNFRNTTPLAFLQHLRLELVHQELMT 280 Query: 304 PWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 ++V A++WGF H G+F+ DY++ + PS TL Sbjct: 281 GEP-GLSVTQVALKWGFVHRGRFSADYRKRYGVLPSETLR 319 >UniRef50_B6A526 Transcriptional regulator, AraC family n=4 Tax=Rhizobium RepID=B6A526_RHILW Length = 338 Score = 180 bits (456), Expect = 9e-44, Method: Composition-based stats. Identities = 51/294 (17%), Positives = 106/294 (36%), Gaps = 7/294 (2%) Query: 58 HPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVW-PNSFWFGIPATRGEQGFIGSQCL- 115 F + + R + +P + +G + Sbjct: 39 STASFQWSTDFWTNGTLSLITSEFHNEWRVKAVPETAEWLSILLPRSGAINVSLGKHMVE 98 Query: 116 -GSAEIATRPGGT-EFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALE 173 +A +F L+ + + L V+ + A + V L ++ Sbjct: 99 SRPGTLALIHNHEADFFLTKGLPHIADVLRLDWSVLLQTAAAIFEKP-VNGSLGLSPMVD 157 Query: 174 VKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESI 233 + + + + + L P L L + + + Sbjct: 158 LTVPAGQLIGNMCRTIIGGIRNHGPLLQSPVAMANLTQALADLLIRTIPNRYSRHLEKQT 217 Query: 234 SHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIR 293 S + A +++ N+S+P+T+ + + VS R L+ F + P A+L+ +R Sbjct: 218 SL-IAPWHVRDAIDFMQANVSKPITMAVIAEAVGVSVRALEMGFRSFRETTPAAYLRTLR 276 Query: 294 LNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 L AVR +L+ P ++ +V+ ++WGF+H G+F+ Y+ ++ E PS T +R R Sbjct: 277 LRAVRNDLLEPSNRE-SVRAVCLKWGFFHFGRFSAVYRSVYGESPSETRKRRAR 329 >UniRef50_Q4KIN6 Transcriptional regulator, AraC family n=15 Tax=Proteobacteria RepID=Q4KIN6_PSEF5 Length = 337 Score = 180 bits (456), Expect = 9e-44, Method: Composition-based stats. Identities = 67/281 (23%), Positives = 116/281 (41%), Gaps = 7/281 (2%) Query: 74 IQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGS--AEIATRPGGTEFEL 131 + + T + + +S+ +P ++ + L S + L Sbjct: 59 LGIIEYGTDVVVDIQDTERFSSYSLSLPLCGEQELSKDGRLLRSDRGQGVIIAPNESQVL 118 Query: 132 STPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALA 191 + D L VV+S ++ L VL LR + ++ AA W Q + Sbjct: 119 AISGDCRKLQVVISRPAMSEALEGLLQRP-VLEPLRFEPGMDALHGAAAAWWRMAQHFIG 177 Query: 192 TFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLE 251 + E Q A + + +L+ + + + L+ RAR+++ E Sbjct: 178 ELAQGNELYEQLAFTREIESSLIKGLILAQPNNYSSELRAMLGVKLPHYLV-RARQHLHE 236 Query: 252 NMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTV 311 + E V + DL VSR L AF + P A+LKR RLN VR+E++ + + Sbjct: 237 HARETVHLEDLEAAAGVSRFKLFEAFRKYFALSPMAYLKRHRLNGVRQEILEHG-SARNI 295 Query: 312 KDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ--RMREWG 350 + A+ WGF HLG+F+ +Y++LF E PS+T + R G Sbjct: 296 SEIALGWGFTHLGRFSAEYRKLFDETPSVTAQRHPARRPAG 336 >UniRef50_A6QA54 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QA54_SULNB Length = 313 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 58/298 (19%), Positives = 114/298 (38%), Gaps = 10/298 (3%) Query: 47 ITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGE 106 + W +Q+ G+F + + IQ+ NS G T Sbjct: 26 LQQWNLEAEQMQKGRFSATISSVHTPRIQLNDTIYSHGFMTRGEFPGNSIMIGYVKT-NA 84 Query: 107 QGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHML 166 + ++ L E+ G E + + + + + + + + + FL + Sbjct: 85 KVVFQNRVLEINELVISTKGDEVDYISSAENEVFTITVEKKLFMQ--AFLDYFGEPFEIH 142 Query: 167 RNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQP 226 +++ +K + + N L + +L + + L Q Sbjct: 143 QDKRRFFIKPHRLQFFLESINSWMTFLKANHHLLLSENKYDMAESEILRDIFSCLLIDQV 202 Query: 227 MVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPN 286 + + AR+ + N+ E + L +L +S+R LQ F GI P Sbjct: 203 LKERSGFKAE-------EARDLLHANVHERFDSVTLAKELGISQRQLQRVFKETYGISPK 255 Query: 287 AWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 +L +R+NAVR+EL+ ++ T+ A+++ F+ L F+ Y+ LF+E PS TLH+ Sbjct: 256 RYLLNLRINAVRKELLMADPRTATISSIALKYDFFDLNHFSKIYKTLFNELPSKTLHK 313 >UniRef50_C4DJB3 DNA-binding domain-containing protein, AraC-type n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DJB3_9ACTO Length = 362 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 61/332 (18%), Positives = 108/332 (32%), Gaps = 5/332 (1%) Query: 17 LPENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQV 76 LP + P E A T+ +I + P FH + L + + Sbjct: 25 LPMLSETVPLARYPIFRTTDPVMAAERARTLFCPHRITEIDEPRHFHARQQGVNLRSLSI 84 Query: 77 FREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLG--SAEIATRPGGTEFELSTP 134 +R + + IP + + + L + Sbjct: 85 SVLSYHCGVRLRTTELRDRYLILIPLGGAAEINVDGESLAVYPTLGCVVGACGPVRMGWS 144 Query: 135 DDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFC 194 + +L V + + + + +R +SA++ +A W + + Sbjct: 145 ANCLMLVVRVERGALEAELRERIGGTGPV-PIRFESAMDFASGLRAGWWRQLTHLVEDLD 203 Query: 195 ENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMS 254 + P L L++ + + + RA + Sbjct: 204 ADSALPRHPLCVGGLESGLMLGLLVAQPHNHS-ERLRAAHPAIGEHRIMRAVAILEREPQ 262 Query: 255 EPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISP-WSQSMTVKD 313 P T L + + R L F +L P A+L+ +RL V REL P + +TV Sbjct: 263 RPWTTAGLAREAGIGVRALYTDFRRVLDTSPMAYLRNVRLRRVHRELRQPSRNTGVTVAK 322 Query: 314 AAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 A WGF HLG+FA Y++ + E PS TL + Sbjct: 323 VATTWGFSHLGEFAAAYRRFYGENPSATLRRA 354 >UniRef50_C5CKJ3 Transcriptional regulator, AraC family n=2 Tax=Variovorax paradoxus S110 RepID=C5CKJ3_VARPS Length = 354 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 61/306 (19%), Positives = 105/306 (34%), Gaps = 19/306 (6%) Query: 56 QLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFI--GSQ 113 Q G +Q+ G + + + +P Q G Sbjct: 54 QWGAGDADAVMWSAATPRLQLMVLRYGSEVEIRPRPFEDFGLVQMPLRGSMQVESAGGRH 113 Query: 114 CLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALE 173 +G ++A L + + V + ++ A+ + +P R Q Sbjct: 114 DVGPGQVAVLSSRDPLTLRWSESCEQIIVRMPHSLLRSGASSIRSPGRAPD---GQPVFV 170 Query: 174 VKEQHKAALWGFVQQAL------ATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQP- 226 ++ + +Q L L PA L D + + + + Sbjct: 171 LESEAAGQWGALLQSLLNTLPASDAVDGAASPLCDPAWIHHLEDGMALFTTLHMRQRARE 230 Query: 227 -----MVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAIL 281 A + L A +V + P+ + DL VS RT L Sbjct: 231 GVSTEPGPAAPGASGGSSARLQAAERWVRTRLCAPLALEDLARAAGVSSRTFYMDCMRQL 290 Query: 282 GIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 G+GP AWL+ +RL++ RR+L+ + V D A GF HLG+F+ YQ+ F E P T Sbjct: 291 GVGPMAWLRDLRLDSARRQLL--ANPGRNVTDVATDCGFGHLGRFSAYYQRRFGELPRDT 348 Query: 342 LHQRMR 347 + + +R Sbjct: 349 VARALR 354 >UniRef50_A1WJA6 Transcriptional regulator, AraC family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WJA6_VEREI Length = 327 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 65/290 (22%), Positives = 115/290 (39%), Gaps = 12/290 (4%) Query: 59 PGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCL--G 116 PG+ ++ L + + + G + + + +P + Q G++ + Sbjct: 43 PGQLDVAHNQVRLARVSLNVLHYGAQVLIDPGERGDFYMVQLPLSGSAQLACGTESVSVD 102 Query: 117 SAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKE 176 ++ E + D T+L + + V+ + + R A + Sbjct: 103 PGVLSVLQPHIESRMVWSGDCTMLLLQVPRSVVHERTMAWG----IDGTPRFALAHSRQV 158 Query: 177 QHKAALWGFVQQALATFCENPEN-LHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISH 235 AA W V + L PA L + LL A A+L P A +++ Sbjct: 159 PEVAAWWQAVLGLTRNIDRFGDQWLRHPAAYAALEEFLLSAFTALLS---PPDAARCLAN 215 Query: 236 QSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLN 295 R L RA+EY+ N + D+ + VS RTL+ F + P A+ +R RL Sbjct: 216 PGDARCLRRAKEYIHANPERALRCADIASHACVSPRTLEAVFKRCGEVSPLAYARRCRLQ 275 Query: 296 AVRRELI--SPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 AV L +++ V + A+ +GF H+G+FA Y++ F+ PS TL Sbjct: 276 AVHEALRLARHEGRAVNVTEVALSYGFLHMGRFAAQYREQFACSPSETLR 325 >UniRef50_Q39N46 Transcriptional regulator, AraC family n=2 Tax=Burkholderia cepacia complex RepID=Q39N46_BURS3 Length = 327 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 62/340 (18%), Positives = 114/340 (33%), Gaps = 20/340 (5%) Query: 17 LPENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQL---HPGKFHGEFTEILLDD 73 L +L + P + ++ D+ + I A Q + G + + +D Sbjct: 2 LTASLPIEPT-LLRRYRYFESDDLDDTRERIAAVLQPHRLTPGSSRGGYSAYMDHVRIDS 60 Query: 74 IQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQC--LGSAEIATRPGGTEFEL 131 + + + + + +G + G + T F Sbjct: 61 VGFGTIGYAGTMSVDAGEIEDYYLAILSLGGYADLNVGGRRTIAGPTQGVIVGPATRFGG 120 Query: 132 STPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALA 191 + D V + I H L+ + L++ Q ++ Sbjct: 121 TFSRDCEQFFVRIDRRAILAHTGHDH--------LQIEPTLDLTRQELQPWLAQLRVM-- 170 Query: 192 TFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMV-TAESISHQSYRRLLSRAREYVL 250 +PE + + + + ++L QP R + RA Y++ Sbjct: 171 --ASSPETVALAQRDRRIALEFERLVISLLLAGQPHHCQTRPGGTALVPRTVKRAEAYIV 228 Query: 251 ENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMT 310 E+ EP+T+ D+ V RTL + F P ++ RL R +L+ Sbjct: 229 EHACEPITLADIALAAGVPVRTLLDGFQRFSHGSPMQLVRERRLERARDQLLHAREAER- 287 Query: 311 VKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 V D A+ GF +LG+FA Y++ F E PS TL + R G Sbjct: 288 VADVALGCGFANLGRFAILYRETFGESPSDTLRRARRSAG 327 >UniRef50_A0NVQ0 Transcriptional regulator, AraC family protein n=2 Tax=Labrenzia RepID=A0NVQ0_9RHOB Length = 332 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 53/328 (16%), Positives = 114/328 (34%), Gaps = 12/328 (3%) Query: 26 KVEVDNVHQRQTTDVYEH----ALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYT 81 K +D +T+DV E A + +F + + + Sbjct: 8 KTPLDRFRCFETSDVDEAREIVARHFCNHRLGRFSAS-DRFDACQNRVCGQHLSLNYLRY 66 Query: 82 GLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCL--GSAEIATRPGGTEFELSTPDDYTI 139 G + + + +P + + G + + A + + Sbjct: 67 GADVAIEPGELSDFYLIQVPISGAAEVRNGCRSMLSTPAAASILNPDRHTAMRWHAGCEQ 126 Query: 140 LGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPE- 198 + + + + A + + +R + + + AA ++ L E Sbjct: 127 ILLQIETGFLQEVATRMAGV--TVGQVRFEPEFNLLSRDGAAWARRLRGVLGAVEEGRVF 184 Query: 199 NLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVT 258 + ++ L + L+ + + + +S +L RA + + E ++ ++ Sbjct: 185 HGTGSPEQRHLEEALVGTLLEFQPNTVSPLLERQETGKS-PAILKRAVKLIGERFADDIS 243 Query: 259 VLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQW 318 +LD+ S R LQ F G P +L+ +RL+ R L+S +S+ V + A + Sbjct: 244 LLDISTHAQTSPRNLQLQFRQEFGCSPLQYLQNVRLSYARHLLLS-EGRSLPVAEVAYRS 302 Query: 319 GFWHLGQFATDYQQLFSEKPSLTLHQRM 346 G HLG+F+ Y++ F E P T Sbjct: 303 GHRHLGRFSVAYRERFGETPGATGRAHR 330 >UniRef50_A1R1F9 Transcriptional regulator, AraC family n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R1F9_ARTAT Length = 307 Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 107/281 (38%), Gaps = 10/281 (3%) Query: 66 FTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLG--SAEIATR 123 + D+ + G +R + IP +G++ + Sbjct: 35 LRSLHRGDVGIEFLDYGADVRIEPEGLQDFHLVQIPLAGHASMQVGARTVESNPRMATVP 94 Query: 124 PGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALW 183 P F +S L V + + R A L+ D + +++ A Sbjct: 95 PIDRPFSMSWDGGSPHLIVYVRRSAVERVAGQLYGNDA----VDLGYGMDLSGAAGRAFL 150 Query: 184 GFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLS 243 V + P+ V+ +L D+ M + L A E+ + ++ RL+ Sbjct: 151 RAVVELHDDMISRPQFAAPAFVQGLLADS----MVSRLLMAMQPPAGEARNAEAEGRLVR 206 Query: 244 RAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELIS 303 RE + + E +TV D+ L VS RTLQ A A G P+ L+ IRL+ R L+ Sbjct: 207 ECRELLERHAFEELTVPDIAECLGVSVRTLQTALRAETGATPSELLRSIRLDRAREMLLE 266 Query: 304 PWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 + +V A Q GF H G+F+ Y + F E PS +L + Sbjct: 267 ANPREQSVTAVAEQCGFTHQGRFSALYVKAFGELPSESLRR 307 >UniRef50_Q0SDR9 Transcriptional regulator, AraC family protein n=7 Tax=Corynebacterineae RepID=Q0SDR9_RHOSR Length = 315 Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats. Identities = 51/286 (17%), Positives = 101/286 (35%), Gaps = 14/286 (4%) Query: 63 HGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLG--SAEI 120 + ++ R G + ++ IP G + Sbjct: 39 RSSLESSQMGASRLARIGFGAPVSIESDHP-GAYGINIPLAGRIVSVTGGTEVTSTPGLA 97 Query: 121 ATRPGGTEFELS-TPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHK 179 P T ++ I+G + D + R+ + + L+++ Sbjct: 98 TICPPDTRTVITNWSSSCEIIGFKVDRDYLQREMDRVLARPGQELP----RQLDLRTGAG 153 Query: 180 AALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYR 239 A FV+ + LH V + L L A+ M ++ + Sbjct: 154 ADWLRFVRSVADQALRDSVLLHSDQVSQQLCGALTTALVLT-----AMPDDDTGAAGIRP 208 Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 R++ R + + ++ + P + ++ + VS R +Q F +G+ P +L +RL V Sbjct: 209 RIVKRVIDAIQQDPAHPWSAGEMAELVGVSVRRMQQGFREYVGMTPMEYLVDVRLERVHA 268 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 EL + T+ + A +WG H G+FA Y++ + PS +L R Sbjct: 269 EL-TGSGSCATISEVATRWGIMHTGRFAAAYRRKYGVTPSESLRDR 313 >UniRef50_D1U469 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U469_9DELT Length = 320 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 67/315 (21%), Positives = 119/315 (37%), Gaps = 12/315 (3%) Query: 32 VHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLV 91 V + A + + + QL G E + + + + + Sbjct: 6 VSHSCFDSLCRAADAVPGLRVDFAQLEGGPCGIEVFSVRHAPFRFTQWRVEKSAHHLGVA 65 Query: 92 WPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITR 151 + A + G I PGG+ + + + G+ + E Sbjct: 66 PLGRVGLALHAEPNLTLNSHGELFGDDVIFLTPGGSTIDSVSFAQTNLFGLSVEEGAFAA 125 Query: 152 QANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGD 211 P + +Q + + + AL T A +G Sbjct: 126 MLGATGCP----LAVPSQGQVRLLTPSREALVRLRDTLWRTREAALTGRCSQAEWDSVGA 181 Query: 212 NLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRR 271 +L + + + RR++ ++ Y+ +N++ PV + D+C ++ VS R Sbjct: 182 SLAACLTTL------GDAGRMPRESARRRIVRQSLGYINDNLASPVKLGDICRKVGVSER 235 Query: 272 TLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQ 331 TL AF LG+ P A++ RLN VRRE+ + ++ DAA +WGFWH+GQF+ DY+ Sbjct: 236 TLIYAFKQHLGLTPKAYVNICRLNMVRREM--ECGRVASITDAATRWGFWHMGQFSADYK 293 Query: 332 QLFSEKPSLTLHQRM 346 + F E PS TL + Sbjct: 294 RFFGELPSQTLSRSR 308 >UniRef50_C5CZK1 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZK1_VARPS Length = 341 Score = 177 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 99/317 (31%), Gaps = 9/317 (2%) Query: 34 QRQTTDVYE-HALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVW 92 ++ D E HA + G F L + + G + Sbjct: 17 LFRSHDAEETHARVSRELKPHRSVWGRGDVDAIFCRAELSALSLCILRYGCDVDIEPDAL 76 Query: 93 PNSFWFGIPATRGEQGFIGSQCLG--SAEIATRPGGTEFELSTPDDYTILGVVLSEDVIT 150 N +P G L + A L D L + + + Sbjct: 77 GNFVLVQMPLRGHADVHTGGHTLQIHPGQGAVISAHKPVRLHWHADCEQLILKIELSRLQ 136 Query: 151 RQA--NFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKV 208 A F + + + + V + + P Sbjct: 137 EVARHAFALRGTDDVGEIDFAMPFCLDDAAGTQWCRMVAGLASLLPSGDLGTYDPRWMAH 196 Query: 209 LGDNLLMAMGAMLEEA--QPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQL 266 DNL++ + + Q S ++ R L RA E++ E + +++ D+ Sbjct: 197 CEDNLMLYLLCHRPNSALQRHAAVRRGSEEAGLRQLRRAEEFMRERLDTLLSLEDVAQAT 256 Query: 267 HVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQF 326 V+RR+L F + P L+ +RL+A +L +V + A+ GF HL +F Sbjct: 257 GVTRRSLALLFKRYRDLSPGEVLRNMRLDAAHAQL--ARHDGASVTEVALSCGFSHLSRF 314 Query: 327 ATDYQQLFSEKPSLTLH 343 A Y++ F + P T Sbjct: 315 AACYRERFGQLPRDTSR 331 >UniRef50_B8Y4V1 EthR n=4 Tax=Corynebacterineae RepID=B8Y4V1_9NOCA Length = 331 Score = 176 bits (447), Expect = 9e-43, Method: Composition-based stats. Identities = 46/284 (16%), Positives = 91/284 (32%), Gaps = 4/284 (1%) Query: 62 FHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQ--CLGSAE 119 F G T + I + + N + +P + + Sbjct: 49 FRGILTVQNVGPITIGELDYNSEVSLDFPHITNGYHVNVPVEHSMSSRSRGREVHITPKH 108 Query: 120 IATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHK 179 A + L + V + + + L + L S + ++ Sbjct: 109 GAMYRKEADALLKASRRLHMTAVKFDSAALEQTLSALLGEPVEVD-LELASGINLERGLG 167 Query: 180 AALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYR 239 W + V L +L+ S + Sbjct: 168 KEWWDLLSDVRRQIDGGNTLFSCRMVADPLAQSLMTGFLLASTHQFS-EQLHSGDSVATP 226 Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 L + ++ +SE T ++ ++ +S R +Q F +G P+ +++ RL Sbjct: 227 ESLKLVEDAIMARLSESFTFTEIAQEVGISLRAIQRGFAHHIGTTPSQFVRTERLRRAHV 286 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 +L++ + V D A +WGF HLG+F+ Y++L+ PS TL Sbjct: 287 DLVAGDPSTTRVADVAARWGFTHLGRFSAQYRKLYGVSPSDTLR 330 >UniRef50_A6EXV2 BenABC operon transcriptional activator BenR n=2 Tax=Marinobacter RepID=A6EXV2_9ALTE Length = 318 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 109/283 (38%), Gaps = 11/283 (3%) Query: 63 HGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQC--LGSAEI 120 + + + G +R + + F I + + S + Sbjct: 42 KSSLSFREFAGFGMSQLSYGNHVRVKSPELDSIYHFQIVTRGECVWHQAGERMKVRSGQA 101 Query: 121 ATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKA 180 +L DD L + + E V+ H + ++ +E++ Sbjct: 102 VMVNPYESIDLEYSDDCEKLIIKVPEHVLNNARELAHGRLPENGIRFTRAPVELR--LCP 159 Query: 181 ALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRR 240 AL ++ L+ + ++ P + L + P + S + Sbjct: 160 ALINIMEAVLSELDDAEDDDINPVCAPYRE-----IILKKLLKVFPSNWSSQESGAACTP 214 Query: 241 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE 300 +L + Y+ +N+ + + +L + ++S R++ NAF P ++K+++L +R + Sbjct: 215 MLGKMLRYIEQNVHRNIDIEELSSVSNMSVRSIYNAFSKAFATTPKCYIKQLKLQKLRED 274 Query: 301 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 L+ + V + A+ +GF HLG+F++DY++ F E PS T+ Sbjct: 275 LLQGKCR--NVTEIALDYGFSHLGRFSSDYRKTFGELPSETMR 315 >UniRef50_Q5Z0F0 Putative transcriptional regulator n=1 Tax=Nocardia farcinica RepID=Q5Z0F0_NOCFA Length = 359 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 58/334 (17%), Positives = 111/334 (33%), Gaps = 12/334 (3%) Query: 16 PLPENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGK----FHGEFTEILL 71 P+ E L+ + + + D + + L P + F + Sbjct: 19 PVEEPLQYEDRP-LARHQLTTSGDPDLVRSAVGTAFCDHR-LSPLRRDIALDAHFHGVRW 76 Query: 72 DDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCL--GSAEIATRPGGTEF 129 D V+ G +R + + +P +GS+ + G Sbjct: 77 DTAGVYYLEYGTDVRIDPRDLDDFYLIQVPVEGHAAITVGSRSFVSTPEVASVLEPGDRV 136 Query: 130 ELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQA 189 ++ L + L + + ++ +++ G + Sbjct: 137 SMAWEGANRQLLLRLDRATVHDAVRKKLGREPAAPLV-FDPRMDLTTPANRTWRGLLTLL 195 Query: 190 LATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYV 249 + + L+ + + R ++RA E + Sbjct: 196 VDAIDRAAAPTS--IAVQEFEGLLVSQLILGQPHNYRDELDRT-PQPVVSRPIARAAELI 252 Query: 250 LENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSM 309 + EP+TV D+ + + + RTLQ+ F P A+L+ +RL VR +L+ Sbjct: 253 EAHAHEPLTVDDIADAVGIGTRTLQDGFRRYYNTTPMAFLRDVRLRRVRTDLLQADPTLT 312 Query: 310 TVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 TV D A++WGF H G+F+ Y+ F E PS TL Sbjct: 313 TVTDIAIRWGFLHPGRFSVLYRDRFGESPSRTLR 346 >UniRef50_Q46VL0 Transcriptional regulator, AraC family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46VL0_RALEJ Length = 368 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 66/279 (23%), Positives = 106/279 (37%), Gaps = 6/279 (2%) Query: 69 ILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSA--EIATRPGG 126 + L D + G + N + IP G+Q L S + Sbjct: 79 VKLHDTAINFLSYGADVDIDPGRLGNFYLAQIPVAGHADIQCGAQSLVSDVRTASLLSPD 138 Query: 127 TEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFV 186 T + D + + + + + + L D V L +L + V Sbjct: 139 TPTRMHWHQDCAQVLLWIEKAAMEHRFALLTGRDPV-GSLAFDPSLPQHAGLASPWTQAV 197 Query: 187 QQALATFCENP-ENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRA 245 ++ L PA + D LL + + + A S + R + R Sbjct: 198 LDLARNIDQHGTHWLAFPAAVASMEDYLLRTLLLLQPHTYTYLLARSAE-PARPRHMQRV 256 Query: 246 REYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELI-SP 304 +YV N P+TV DL VS R L+ F L P +L+ +RL+ VR+ LI + Sbjct: 257 IDYVHANAETPLTVADLAQIACVSVRALEEGFRRHLNTTPVGYLRDVRLDGVRQALIAAA 316 Query: 305 WSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 ++ ++ D A ++GF HLG+FA Y+Q F PS TL Sbjct: 317 GAEHASITDIAYRFGFTHLGRFAAYYKQRFGVSPSATLR 355 >UniRef50_Q5YXL4 Putative transcriptional regulator n=1 Tax=Nocardia farcinica RepID=Q5YXL4_NOCFA Length = 312 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 72/319 (22%), Positives = 116/319 (36%), Gaps = 21/319 (6%) Query: 33 HQRQTTDVYEHALTITAWQQIYDQLH------PGKFHGEFTEILLDDIQVFREYTGLALR 86 H T D +E A +Q+Y P + + L + V R G + Sbjct: 6 HITATHD-WELAHAAV--EQVYFPHRLEPLARPDRLGLTMRSLDLGPVTVGRLTWGTEVA 62 Query: 87 QSCLVWPNSFWFGIPATRGEQGFIGSQCL--GSAEIATRPGGTEFEL-STPDDYTILGVV 143 C +P ++ IP T G + + + + + D ++GV Sbjct: 63 IDCE-YPGAYEINIPVTGRLVSTAGDEQIWSEPGQATVFHADRRALIETWSADCRVVGVK 121 Query: 144 LSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQP 203 + D + R+A +H V LR L+ + + V+ A E E L P Sbjct: 122 FAADFLEREAERIHAST-VRGRLRLPHQLDFATPERRSWLRLVRTLSAQLNEPAELLANP 180 Query: 204 AVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLC 263 V L +L A + R + R + + E+ + P T+ ++ Sbjct: 181 LVADGLASSLATAFLLAAMPEENDPVGR-----MRPRTVKRVLDALHEDPARPWTLAEMA 235 Query: 264 NQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHL 323 S R +Q AF LG P A L+ IRL EL + S+ TV D A +WGF Sbjct: 236 ELAGSSVRRVQEAFAEHLGTTPTAALRDIRLARAHAELRTGASR--TVADVAARWGFSSP 293 Query: 324 GQFATDYQQLFSEKPSLTL 342 +FA Y++ + PS Sbjct: 294 SRFAAAYRRRYGVPPSAAR 312 >UniRef50_Q2IVS4 Transcriptional regulator, AraC family n=2 Tax=Rhodopseudomonas palustris RepID=Q2IVS4_RHOP2 Length = 336 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 57/331 (17%), Positives = 108/331 (32%), Gaps = 11/331 (3%) Query: 22 KLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEIL---LDDIQV-F 77 + P + + +T D A + W + L + G F+ L ++ + F Sbjct: 12 QTPPTELLKDFAILRTNDPDT-ARKLV-WSRFGLNLSTPRIEGFFSRANIAELPNVSLYF 69 Query: 78 REYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDY 137 + Q + +G E G L Y Sbjct: 70 CANSTPVALQIPNSKGAHVHLCLRGRGTLIHDRRRIEIGEGEAFVCSPGKPALLDFAAGY 129 Query: 138 TILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENP 197 L + + ++ R L + + + + H A V + Sbjct: 130 EELALHVPVPMLERTFAALTGLG-PHTTIAFEPEIITDDPHYAGFRDLVLLLAGSLDAAF 188 Query: 198 ENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPV 257 + + ++ + + + ++ E + L+ A Y+ Sbjct: 189 SAWPKATIAQLELACVSQLLYCTSHNLRRVLCPEDFG--AVPSLVRIAEHYIESRCESDA 246 Query: 258 TVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQ 317 +V D+ VS TL F G P A++KR +L R+ L S + TV A++ Sbjct: 247 SVDDIARACAVSVSTLTRMFMKYRGYSPAAFIKRAKLARARQLLESRAAS--TVVGVALR 304 Query: 318 WGFWHLGQFATDYQQLFSEKPSLTLHQRMRE 348 GF + +FA DY++ F E P+ TL +R + Sbjct: 305 CGFANPSRFAKDYREAFGESPTETLRRRRPQ 335 >UniRef50_B3QCR7 Transcriptional regulator, AraC family n=2 Tax=Rhodopseudomonas palustris RepID=B3QCR7_RHOPT Length = 335 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 59/326 (18%), Positives = 115/326 (35%), Gaps = 10/326 (3%) Query: 29 VDNVHQRQTTDV----YEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLA 84 + + +T + +E + D G + E + L DI + G Sbjct: 13 LSSFRHVKTGSIELLEHELGRFYPGIRFELDNPD-GALNAEASRCELSDIALTYGRHGTG 71 Query: 85 L-RQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVV 143 + +S F + + + L D+ L + Sbjct: 72 ITIDVPYNNTHSLVFAYAGSAEARTGRLRSDIAGHRAFVASATRPVTLKYAPDFEQLILN 131 Query: 144 LSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQP 203 +S+ +T L + + + ++ LW + + + HQ Sbjct: 132 VSQRSVTTNLEALIGAP-LSQPIIFKPTSNLRRTSARRLWEQLMSLVERLGRHDGGYHQQ 190 Query: 204 AVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLC 263 ++ +L + A P++ +E+ + + + +Y+ +P+TV L Sbjct: 191 ITTELEQAIILSFLTANESNYTPLLMSEAAAAGRRP--VHKVADYLEAYWDQPLTVEMLA 248 Query: 264 NQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHL 323 VS RTL ++F G P +++RIRL R+ L +++V A+ GF +L Sbjct: 249 RVSGVSVRTLFHSFRGQFGYSPMEFVRRIRLERARQMLAGADP-ALSVTSVALSCGFGNL 307 Query: 324 GQFATDYQQLFSEKPSLTLHQRMREW 349 G FA Y++ F E PS TL + Sbjct: 308 GHFAGYYKKAFGEAPSATLSRARSPA 333 >UniRef50_D1BV80 Transcriptional regulator, AraC family n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BV80_XYLCX Length = 322 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 67/327 (20%), Positives = 120/327 (36%), Gaps = 15/327 (4%) Query: 26 KVEVDNVHQRQTTDVYEH----ALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYT 81 + + +TTDV + A ++ + + G F +LD + + Sbjct: 5 TTPLASHGVLRTTDVDDARSSVAASLAPHRLTPLR-DAGAFEALHNVAVLDRLSLHYIDY 63 Query: 82 GLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCL--GSAEIATRPGGTEFELSTPDDYTI 139 G + + IP G+ L A G + Sbjct: 64 GTEVEVTTERL-GFHLVQIPLGGLSTIQAGTSTLAATPRSAAVTASGEVLRMRYSAGNPR 122 Query: 140 LGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPEN 199 L + ++ D++ + V+ +R + +++ + G V LA Sbjct: 123 LMLCIAPDLLRERLEV-AAEVGVVVTIRGGATVDITAGAGRSWRGLVDVVLADLEHEGGL 181 Query: 200 LHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTV 259 P L ++ + A L E + H + R++ RA + E+ +EP+ Sbjct: 182 GRSPLAATTLQLAVVDGLIASLAE----PWTDPGDHSTPERVIRRAARLIEEHCAEPLGT 237 Query: 260 LDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWG 319 D+ + +S R LQ F A L P A+++ RL VR L + +V +AA +WG Sbjct: 238 PDIAEAVGISVRALQAGFKAHLSTTPMAYMRHARLRRVRGSLTDGSAH--SVAEAASRWG 295 Query: 320 FWHLGQFATDYQQLFSEKPSLTLHQRM 346 HLG+F+ DY+ F E PS T + Sbjct: 296 VTHLGRFSADYRAAFGEFPSETFRRAR 322 >UniRef50_B2I0G2 AraC-type DNA-binding domain-containing protein n=13 Tax=Acinetobacter RepID=B2I0G2_ACIBC Length = 328 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 56/294 (19%), Positives = 109/294 (37%), Gaps = 7/294 (2%) Query: 53 IYDQLHPGKFHGEFTEILLDD--IQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFI 110 D ++ + + L + + + G + + ++ +P + I Sbjct: 32 RLDTIYKDNLDFHYDGMRLPNKKMAIGTISYGANVAINISNLK-AYSISLPIQGRQALNI 90 Query: 111 GSQCLGSAE--IATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRN 168 S E + +L D VV+ E + L N ++ N Sbjct: 91 RGAHYQSDENRGLIVSNNDQQDLIIDKDCRKFQVVIPERSMQIVLADLLNKPIETPIIFN 150 Query: 169 QSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMV 228 EQ A W +Q L + + + + ++ A+ E Sbjct: 151 PEMHLDSEQLIGAWWKNIQNFLQLKSQYSNFYGLQMLSEDYENFVIKALLLSQENNYS-E 209 Query: 229 TAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAW 288 +S+SHQ + + R +++E+ E + DL VS+ L + F G P ++ Sbjct: 210 ALKSLSHQDEPAYIRKVRNFIIEHAHEEICAEDLQRLAGVSKSKLYDEFQQYYGTSPMSY 269 Query: 289 LKRIRLNAVRRELISPWSQ-SMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 LK+ RL + + L + + +++ A WGF HL +F+ +Y++ F E PS T Sbjct: 270 LKKYRLQQIYKILSTTGADKKVSISKLAYDWGFNHLSRFSQEYREEFGENPSET 323 >UniRef50_C3MI82 Putative AraC family transcriptional regulatory protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3MI82_RHISN Length = 333 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 101/276 (36%), Gaps = 9/276 (3%) Query: 80 YTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCL--GSAEIATRPGGTEFELSTPDDY 137 + + +P + + + A L+ Sbjct: 62 RYQGSAVFEHESANEKYLIFLPRYGFAAINVNGARVLTSPRQGAIVACQQAKSLTLSGPM 121 Query: 138 TILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENP 197 L VV+ ++ + + V +++ + + + Sbjct: 122 EHLVVVVDRATLSSRLMDMLEVP-VSGGFDFFPEIDLTAGPGLIIAQTAAALHSGLAASA 180 Query: 198 ENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPV 257 + P R + L+ + L S R + RA E++ N+S+P+ Sbjct: 181 ALRNAPVARTSFANALVELLLESLPHRHTSELNRRTSPM--PRHVKRAVEFMRANLSKPL 238 Query: 258 TVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQ 317 T+ ++ R+LQ+ F P+++L+ +RL+AV +EL+ S TV D A + Sbjct: 239 TIQEIALASGSGIRSLQDGFRRFKQTTPSSYLQYLRLDAVHQELLQAK-SSQTVCDIARK 297 Query: 318 WGFWHLGQFATDYQQLFSEKPSLTLHQ---RMREWG 350 WGF H G+FA DY++ F + PS TL R+R G Sbjct: 298 WGFSHSGRFAADYRKRFGQAPSQTLQSSSFRIRPPG 333 >UniRef50_Q07KT1 Transcriptional regulator, AraC family n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07KT1_RHOP5 Length = 328 Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 59/325 (18%), Positives = 109/325 (33%), Gaps = 7/325 (2%) Query: 27 VEVDNVHQRQTTDVYEHALTIT-AWQQIYDQLHPGK-FHGEFTEILLDDIQV-FREYTGL 83 + +T D + + + Q+ G F G I V F Y Sbjct: 8 EPLRRYPVARTRDPEQMRDALLTRYGATSCQISHGPDFFGRANCIEHAATSVSFCSYGSE 67 Query: 84 ALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVV 143 A+ G+ + + Y L + Sbjct: 68 AVVDFPEADFARLQIGLQGFASTTSAGDVTEIHPEVGCISSPNQAATVRFGHGYEQLVLR 127 Query: 144 LSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQP 203 + + + + + R L + L + +L V + ++ L P Sbjct: 128 IQNATLEDRLSRVVGF-RPKGALHFDAVLRCDQPKAESLRQLVLFFASQLQQHAAAL-PP 185 Query: 204 AVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLC 263 V L + ++ + ++ + + A E++ + ++P+T+ L Sbjct: 186 LVVAELEQAITVSFLTATRHNFSGL-LDADAKDGAPDHVRIAEEFIEAHWNQPITIEKLT 244 Query: 264 NQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHL 323 ++ VS RTL AF G P+A++K+ RLN ++ L +V A GF + Sbjct: 245 DETTVSSRTLLRAFLKHRGYSPHAFVKQTRLNRSKQILERGDP-VTSVTSVAYACGFGNP 303 Query: 324 GQFATDYQQLFSEKPSLTLHQRMRE 348 G FA DY++ F E PS TL + R Sbjct: 304 GHFAKDYREAFGELPSDTLARAKRR 328 >UniRef50_C6B5E0 Transcriptional regulator, AraC family n=7 Tax=Rhizobium RepID=C6B5E0_RHILS Length = 343 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 68/339 (20%), Positives = 116/339 (34%), Gaps = 14/339 (4%) Query: 19 ENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIY-----DQLHPGK-FHGEFTEILLD 72 EN P+ E Q + + A+ Y L + F + Sbjct: 7 ENTARAPEPEASEFAPTQEG--TDFESMVRAYSAGYGVFGAKPLSNDRAFAWAADLRTSE 64 Query: 73 DIQVFREYTGLA-LRQSCLVWPNSFWFGIPATRGEQGFIGSQCL--GSAEIATRPGGTEF 129 V + ++ P F IP + + IG + G + Sbjct: 65 AFTVLHSVYQSSWTSRTLDETPQHLAFYIPHSGSFRLSIGKTVVESGPGRLLMANNHEAG 124 Query: 130 E-LSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQ 188 + L + + L V+ R L +L L + +++ + VQ Sbjct: 125 DRLILGGPHCSDALFLDWKVVRRMLVSLVEMP-ILDSLDLEPVVDLATPSGQLIGSLVQT 183 Query: 189 ALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREY 248 + L P + + L + + + RA +Y Sbjct: 184 IVQGMRNGGPLLSSPLALAAMSETLANLVIRFGRHRLSDHLEKQKVCLIAPWHVRRAIDY 243 Query: 249 VLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQS 308 + N++EP+T+ + + + VS R LQ F A G P +L+ IRL A R +L P +Q Sbjct: 244 MHANIAEPLTMTMVADGVGVSLRALQTGFRAFRGTSPGGYLRTIRLQAARDQLRDPMNQ- 302 Query: 309 MTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 +V++ WGF H G+F+ Y+ F E P T Q R Sbjct: 303 RSVREICATWGFSHAGRFSIVYRSAFGESPRDTRLQAER 341 >UniRef50_B7RQR5 Transcriptional regulator, AraC family n=1 Tax=Roseobacter sp. GAI101 RepID=B7RQR5_9RHOB Length = 341 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 93/286 (32%), Gaps = 4/286 (1%) Query: 61 KFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAE- 119 + ++ V G + + + + F +P + + + Sbjct: 53 PLSVSHNAVRGRNLSVNYLSYGAEVSVDPGQFNSFYMFQMPLSGKAHVKHRGSEMTADAD 112 Query: 120 -IATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQH 178 L D L + + A L + +R ++ + Sbjct: 113 TGTLLNPDRTARLRWGADCRKLLFQIDRTHLENVAQSLTGTP-LPGPVRFDMRVDFTSTN 171 Query: 179 KAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSY 238 L Q + ++ + L+ L+ + + Sbjct: 172 GRKLQRAFAACAMAIERGSLFQPQYSATELRIETDLVVALLTLQNSNVSHIISRAEGGAA 231 Query: 239 RRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVR 298 R + RA +Y+ N+SEP+T+LD+ ++ RTLQ AF P L+ RL+A Sbjct: 232 PRDMRRALDYMHANLSEPITILDIAKAAEMNVRTLQKAFQRSFAKTPMQVLRDARLDAAH 291 Query: 299 RELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 L + + V + A GF HLG+F++ Y+ F P Q Sbjct: 292 YLLSD-RNDAPNVSETAYSCGFSHLGRFSSYYRSRFGHSPRDVRAQ 336 >UniRef50_C9PH24 Ethanolamine operon regulatory protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PH24_VIBFU Length = 277 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 5/258 (1%) Query: 93 PNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQ 152 PN+ W G + + + ++ RP FEL+TP D+ I G+V+ +++ Sbjct: 3 PNAVWIGFSMNSQ-RPKVNGLQAETHQLMIRPAQESFELATPQDFHIFGIVIDRELLLNG 61 Query: 153 ANFLHNPDRVLHMLRNQSALE--VKEQHKAALWGFVQQALATFCENPE-NLHQPAVRKVL 209 F + +E V + +L ++ AL+ + L + + L Sbjct: 62 MQFGSQEQWENTQWETATLVENNVPQHGCWSLVDLIRDALSPQSILGQKLLEESVAQAHL 121 Query: 210 GDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVS 269 L A+ L Q E S+ + R+ L R +Y+ +N P+++ D+C VS Sbjct: 122 HAMLRTAVMDRLSAFQISTEREPRSYHTRRQALRRLYQYIEQNGDYPLSISDMCAIACVS 181 Query: 270 RRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATD 329 +RTLQN F LG+ P +L+ RLNAVRR L+ SQ + D A+ +GF+H+G F Sbjct: 182 QRTLQNCFEQELGVSPATFLRECRLNAVRRVLLD-QSQQRAICDVALDFGFYHIGTFNHY 240 Query: 330 YQQLFSEKPSLTLHQRMR 347 Y+ LF E PS T + +R Sbjct: 241 YKLLFGETPSQTRDRALR 258 >UniRef50_C3KLQ8 Probable transcriptional regulator protein, AraC family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KLQ8_RHISN Length = 341 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 107/285 (37%), Gaps = 5/285 (1%) Query: 67 TEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCL--GSAEIATRP 124 ++ ++ + ++F +P + + +G + L Sbjct: 47 RHYSAGPFSIWAGMCHSGMKVTFSQPSDAFVLYLPHSSVMEIDVGRKRLLSTPGTAMVGN 106 Query: 125 GGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWG 184 L+ ++ +G+ + + Q + L + VL + + +E + L Sbjct: 107 MAHFERLTIHENRGHIGIAFDKSAMVGQLSQLLDAP-VLGDIGLCATVETDSAIGSRLAA 165 Query: 185 FVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSR 244 F N L ++ + L + +S R L R Sbjct: 166 LGSLLWDCFDGPGGNRVSTTATTHLFQAAMVMILETLPHNYSARLHKPMSPAM-PRNLKR 224 Query: 245 AREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISP 304 A EY++ N++EP++V D+ + S R LQ AF P +L+++RL VR+ L Sbjct: 225 AIEYMVANIAEPMSVADIAREAGTSVRALQTAFQQFKDTTPLNYLRQMRLEGVRKTLCD- 283 Query: 305 WSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREW 349 + ++++ A WGF H+G+F+ Y F + PS TL R Sbjct: 284 DANTLSIAQVARAWGFTHMGRFSAVYHDAFGQTPSETLKLHSRRG 328 >UniRef50_Q987P8 Transcriptional regulator n=1 Tax=Mesorhizobium loti RepID=Q987P8_RHILO Length = 299 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 65/313 (20%), Positives = 103/313 (32%), Gaps = 17/313 (5%) Query: 32 VHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLV 91 + D E ++ W+Q Y Q+ G + G ILL +++ RE + Q Sbjct: 2 FFETTFHDATEQEASLPGWRQEYRQVSTGGYDGRTMAILLPGVEILRETISVGTEQMFSA 61 Query: 92 WPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITR 151 S F R + + D +L +VL D + Sbjct: 62 PEGSMIFYYYPKRDRSELVRGEKATGVSGFALNWTNRIGF-MDADSDLLMLVLRRDAVAD 120 Query: 152 QANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGD 211 + + + V L N F+ L + P Sbjct: 121 E-DRSRIAELVEPPLENA--------------AFLADWLLSLLGGARQQSHPCAWGKFDG 165 Query: 212 NLLMAMGAMLEEAQPMVTAESISH-QSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSR 270 L + E H ++ + R+ + + P +V L L VS Sbjct: 166 VLADVITDRFELLFQKSLVRQTPHIAQTEQIYRKIRDRIFDAPDMPHSVKSLSRDLGVSA 225 Query: 271 RTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDY 330 L+ + + I + L +RLN RR+L+ V D AM WGF+H +FA Y Sbjct: 226 FNLRASCQSFTQIPLDRILMMLRLNGARRDLLHARCSPRKVSDIAMDWGFFHWSRFALRY 285 Query: 331 QQLFSEKPSLTLH 343 + LF E PS TL Sbjct: 286 KSLFGETPSQTLK 298 >UniRef50_Q47CB9 Transcriptional regulator, AraC family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47CB9_DECAR Length = 321 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 97/287 (33%), Gaps = 12/287 (4%) Query: 64 GEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFI--GSQCLGSAEIA 121 + + R G R P+ + + + S L + + Sbjct: 44 ASLNHRKAGSLDLCRLSYGAQARIVSEGLPDIYHVQFILRGHCRYELYRESLSLSAGHVL 103 Query: 122 TRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAA 181 +L+ +D V + + + H+ + ++ Sbjct: 104 LINPEEPIDLTYSEDCEKFIVRIPSSLFSEACIE-HSWFKPNECIKFNQV----PYKFEE 158 Query: 182 LWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRL 241 L +Q E ++ P + + + + ML+ + S Sbjct: 159 LDSLIQLLGLLCQEAESSMATPQMLQHYNRVVTGKLMTMLKHNVSLTPPSLQSVSFD--- 215 Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 R +Y+ N+ +T +L H+S R+L F P ++++ +L V L Sbjct: 216 --RLVKYIENNIKRDITAEELAQYSHLSLRSLYLLFEKNAKTTPKNFIRQKKLEQVYSTL 273 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMRE 348 I+P S V A+++GF HLG+F+ Y+ F PS T+ R ++ Sbjct: 274 INPTSHVANVTAVALEYGFTHLGRFSELYKSNFGVLPSETIRSRQKQ 320 >UniRef50_UPI0001C38021 transcriptional regulator, AraC family protein n=1 Tax=Arthrospira platensis str. Paraca RepID=UPI0001C38021 Length = 352 Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 73/323 (22%), Positives = 124/323 (38%), Gaps = 7/323 (2%) Query: 26 KVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLAL 85 K R+ V + + AW L G F E E+ I++ +T Sbjct: 29 KPMCAEYKARRALAVDSQSEVLPAW-IEGFHLGEGVFRLEHREVAFPGIEIAHFFTENLF 87 Query: 86 RQSCLVWPN--SFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVV 143 ++ F G+ ++G IA E+ S P + + + Sbjct: 88 SDHHVIPEGETHFSLGLYPHHPLLSWMGYTDPIGNAIAVHRSQIEYTSSLPPGWHGVYIC 147 Query: 144 LSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQAL-ATFCENPENLHQ 202 +++++ + L NQ+ L V A F+QQ C L Sbjct: 148 FNDELLA-NLDLLPEKFWENSQDPNQAVLTVHPIRFANFTRFMQQWFPRAECLYRRGLLT 206 Query: 203 PAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLL-SRAREYVLENMSEPVTVLD 261 P +L + L +L+ I S R + + + N+ + +T + Sbjct: 207 PQEAALLREKFLCQFRELLDYTFEQRGDRQIFKPSRRYWIFETVQAIIDNNLRQNLTNEE 266 Query: 262 LCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFW 321 LC QL +S R+LQ AF I G+G +++ +LNAVR EL + T+ A +GF Sbjct: 267 LCQQLGISLRSLQYAFKEITGVGVQQYIRARKLNAVREELCGRSANPTTIYAIATAYGFS 326 Query: 322 HLGQFATDYQQLFSEKPSLTLHQ 344 H+G+F+ + + F E PS TL + Sbjct: 327 HMGRFSEQFHRYFGEYPS-TLKK 348 >UniRef50_Q89FI3 Transcriptional regulatory protein n=3 Tax=Bradyrhizobium RepID=Q89FI3_BRAJA Length = 341 Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 61/330 (18%), Positives = 108/330 (32%), Gaps = 13/330 (3%) Query: 26 KVEVDNVHQRQTTDVYEHALTITAWQQIYD----QLHPGKFHGEFTEILLDDIQVFREYT 81 + + + T DV E A I +D Q F D + Sbjct: 15 AERLADFARVATDDVDEAAEQIGRIFCPHDLKPAQARAAGFSARHNCAAFDGFSINYVTY 74 Query: 82 GLALRQSCLVWPNSFWFGIPATRGEQGFIGS---QCLGSAEIATRPGGTEFELSTPDDYT 138 G ++ F +P T + G+ + + + D Sbjct: 75 GGSVSIDPGCLERFFLLQVPLTGTARIRAGAGDFDAVPDRTASLLSPTIPTRMMWS-DCA 133 Query: 139 ILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCE-NP 197 + ++L ++ ++A L RV + +++ AL + + P Sbjct: 134 QVILLLDRRMVEQRAAALSG--RVAGTVEFDPVIDLDAPSGRALRTSLGGLMTLAERLGP 191 Query: 198 ENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAE-SISHQSYRRLLSRAREYVLENMSEP 256 P + LL + S + R L AR+ + +N EP Sbjct: 192 SGRLSPVATADWREALLDHLLNGQRHGLSDAIRTFSGQAERLPRALRVARDRLADNAGEP 251 Query: 257 VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAM 316 + + L + R LQ F G+ + L +RL + L + ++ + A Sbjct: 252 LDLAQLACAAGIGIRALQLGFRRHFGVSISEMLLDMRLAGLHARLAQARPDA-SITEIAF 310 Query: 317 QWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 GF HLG+ A Y++ F E PS TL +RM Sbjct: 311 DLGFTHLGRMAGAYREKFGETPSATLRRRM 340 >UniRef50_B3QH76 Transcriptional regulator, AraC family n=3 Tax=Rhodopseudomonas palustris RepID=B3QH76_RHOPT Length = 340 Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 113/327 (34%), Gaps = 6/327 (1%) Query: 26 KVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLAL 85 + + + ++ D E + + +P F L I ++ ++ A Sbjct: 12 RELLQDFPLVRSQDPIEARDILRRYGVDMIVSNPSDFFMRTNLAELPHIGLYFVHSSGAT 71 Query: 86 RQSCLVWPNSFWFGIPATRGEQGFIGSQCLG--SAEIATRPGGTEFELSTPDDYTILGVV 143 R + + G++ + G +L + L + Sbjct: 72 RLVIPERETAL-VHLSLQGDALLSSGTRRVELSQGSACICSPGVSAQLEFGQNSRQLLLR 130 Query: 144 LSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQP 203 + + V+ R L + + + A+ E + + + Sbjct: 131 MPQRVLERAIAALVGF-KPRQPILFEPAICNDEPRYLGFRELTTLLASRLDSSYSVWPKN 189 Query: 204 AVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLC 263 + + + + ++ + + R + A YV + E +++ D+ Sbjct: 190 VLLHLEQSCITALLYCSRHNLGHLLENANAVNDDVPRYVRTAEHYVESHRDEDISIEDVA 249 Query: 264 NQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHL 323 VS TL AF G P+A++KR++LN +R L + + T+ A++ GF + Sbjct: 250 RIAGVSISTLTRAFLKHRGCSPSAYVKRVKLNHAKRLLETGAA--TTLIGVALRCGFANP 307 Query: 324 GQFATDYQQLFSEKPSLTLHQRMREWG 350 +F+ DY++ F E P+ TL + G Sbjct: 308 SRFSQDYREAFGESPTETLRRCRPNRG 334 >UniRef50_A2SM26 Transcriptional regulator, AraC family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SM26_METPP Length = 324 Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats. Identities = 61/340 (17%), Positives = 119/340 (35%), Gaps = 37/340 (10%) Query: 17 LPENLKLTPKVEVDNVHQRQTTDVYEHA--LTITAWQQIYDQLHPGKFHGEFTEILLDDI 74 +P +L P +V TD +E A W Q+ D++ P +F+ + + Sbjct: 9 VPASLPEPPWWSTTDVALADRTDAWEAALSDNFRRW-QVPDRVAP-EFNARLRHRDVAGL 66 Query: 75 QVFR--------EYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQ--CLGSAEIATRP 124 +V + Q + I + E G + +G ++ Sbjct: 67 RVVECICDPCGGRRLPRHVSQEGAAY---IGVQITRSGRESLRAGDERVAVGPGDLVIWT 123 Query: 125 GGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWG 184 E + + + ++L D + + + L+ + A L+ Sbjct: 124 SDQPMEFTVTERLHKVSLILPWDDVKERLPRTGR--------FRGTVLDSRSGIGAVLYS 175 Query: 185 FVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSR 244 ++ + + E AVR+ + L AM L E + L R Sbjct: 176 HIESLASQLED-LEAGELSAVRRATVELLTAAMSCRL---------EPAPRGLSLQQLKR 225 Query: 245 AREYVLENM-SEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELIS 303 ++Y+L+++ E +T + H+S R L F G +A++++ RL L + Sbjct: 226 VQDYILDHLQDETLTPGSIAQAHHISPRYLHLLFGK-TGQSVSAYIRQQRLERCGEALSN 284 Query: 304 PWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 P + +V + A QWGF F+ ++Q F P Sbjct: 285 PSYREHSVAEIAYQWGFTDPAHFSRVFKQHFGHPPGHCRR 324 >UniRef50_Q3JJW1 AndR n=53 Tax=Burkholderia RepID=Q3JJW1_BURP1 Length = 405 Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats. Identities = 59/331 (17%), Positives = 110/331 (33%), Gaps = 21/331 (6%) Query: 24 TPKV----EVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHG--EFTEILLDDIQVF 77 P + ++ D+ E I+ Q + L G HG + L + + Sbjct: 86 PPTPFDPLALREHRLFESRDLDETRERISRVMQPHALLPDGSRHGPSHMDYVRLGGLGIG 145 Query: 78 REYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQC--LGSAEIATRPGGTEFELSTPD 135 G A+R T Q + + + G F+ Sbjct: 146 TIAFGDAMRVHLDAVDGYHLLMFCLTGSAQVRTMGRAFDVDAHTGVLCAPGEPFDAHLSR 205 Query: 136 DYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCE 195 D + + + + + + +A Q L Sbjct: 206 DCEQFVLRIDAATLAAH--------AGDAAAALDPVIGIDDSALSAWM----QQLQLVAR 253 Query: 196 NPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSE 255 +PE L + + L + +L + P + + RA+E++ +++ Sbjct: 254 SPELLASASANPRVATRLEQLLLDLLIDGHPPAAPPARRADPAPGFVRRAQEFIGAQLAQ 313 Query: 256 PVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAA 315 P+ + D+ V RTL++ F G P +L++ RL R L + + + + A Sbjct: 314 PLQLADIAQAAGVPERTLRDGFLQFRGTSPMQYLRQRRLERARELLRTAAPERR-IAEIA 372 Query: 316 MQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 + GF H G+FA Y++ F E PS TL R Sbjct: 373 LDCGFAHFGRFAIAYRERFGELPSATLADRR 403 >UniRef50_A5VE15 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VE15_SPHWW Length = 336 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 61/303 (20%), Positives = 107/303 (35%), Gaps = 16/303 (5%) Query: 48 TAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQ 107 ++ + +L G+ +D +VF + Q C P + IP T + Sbjct: 48 PGFRLDHKRLDVGRIK--IDFARIDCGKVFE------VIQVC--DPGYYSCRIPITGSCE 97 Query: 108 GFIGSQ--CLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHM 165 + + LG +I YT + + + ++ Sbjct: 98 YRLHNAKWTLGPGQILAGNPFDSIPKRFVAPYTQAILSIEVGALNEVLAAELG-HPIVDP 156 Query: 166 LRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQ 225 LR + A L + + + V + L LL+ + Sbjct: 157 LRFEPIPSAGPA--ARLLSTMVEFNWMTFDTGTAATHWRVARQLERALLVGLLRAAPHNY 214 Query: 226 PMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGP 285 + E S + + RA Y+ NM+ + + D+ + VS RTL F P Sbjct: 215 SVEM-ELQSREIAPHYVRRAEAYIRANMARDLKMEDIVEESGVSSRTLFYGFRRWRQTTP 273 Query: 286 NAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 A+LK RL+ R L +V D A+ G+ +L +F++DY+ F E+PS TL Sbjct: 274 MAYLKAARLDCARMALTGASVAGGSVTDVALGVGYQYLSRFSSDYRARFGERPSDTLLSV 333 Query: 346 MRE 348 R+ Sbjct: 334 TRQ 336 >UniRef50_B9JM27 Transcriptional regulator protein, AraC family n=4 Tax=Rhizobium/Agrobacterium group RepID=B9JM27_AGRRK Length = 344 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 98/257 (38%), Gaps = 6/257 (2%) Query: 94 NSFWFGIPATRGEQGFIGSQCLG--SAEIATRPGGTEFELST-PDDYTILGVVLSEDVIT 150 +P T G + ++ S + + + L+ + Sbjct: 76 EWLSILLPLTGAIDVARGRNVIEGVPGQMLLVNNREAERFSVRGEPHRSQVLRLNWTAMA 135 Query: 151 RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLG 210 ++ + + L +++ + G Q + + H P L Sbjct: 136 QKVADILEIP-LSGALDLSPVVDLSTSSGQVIGGLGQVIILGIRDAGPLCHSPIAISNLT 194 Query: 211 DNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSR 270 + L + + + I H R + A E++ N+ P T+ + VS Sbjct: 195 ETLADMIVRSIPHRLSHHLDKKI-HMIAPRHVHSAIEFMRANIDRPFTMQKVAEVAGVSI 253 Query: 271 RTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDY 330 R+L+ F G P A+L+ +RL AVR +L+ ++ +V+D ++WGF+H G+F+T Y Sbjct: 254 RSLEEGFRTFKGTTPAAFLRTMRLRAVREDLLDHSNR-RSVQDICLKWGFFHFGRFSTVY 312 Query: 331 QQLFSEKPSLTLHQRMR 347 + + E PS T + R Sbjct: 313 RMTYGENPSDTRKRISR 329 >UniRef50_Q0K9L2 Transcriptional regulator, AraC-family n=2 Tax=Cupriavidus RepID=Q0K9L2_RALEH Length = 318 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 65/303 (21%), Positives = 117/303 (38%), Gaps = 4/303 (1%) Query: 41 YEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGI 100 E ++ Y + + L+ + + G A S P F + Sbjct: 10 DEFEASLYGVNGRYMLRSAQRRDWRLRVLELNGVALMAGQEGAATIYSGAGMPGCFNLFL 69 Query: 101 PATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPD 160 P + E + + I F + + + + + +++ R + Sbjct: 70 PLSGHECTVVDGRRFDRHAIGWMAPDRMFHIDASRPASWMTISMPCELVCRWMATYADNA 129 Query: 161 RVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAM 220 + + R + + AL Q+ L P LH PA + LL Sbjct: 130 DLSLLAR--NLVLTGGPSLGALLALTQRLLFIDDRQPAQLHHPAGEQTARSELLRLAFNT 187 Query: 221 LEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAI 280 L + ++ HQ++RR+LS+A + + P+ + DLC S RT++N F+ Sbjct: 188 LL-PLAARSTDTARHQNHRRILSQAMDLLAAARHTPILLEDLCAATSASERTIRNVFNRY 246 Query: 281 LGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSL 340 +GI P+ +L RL+ R+ L + TV M++G W +G+FA Y++LF PS Sbjct: 247 VGISPHRYLVLHRLHHARQALKHAKAGE-TVTSICMRFGVWDIGRFAMQYRRLFGVLPSQ 305 Query: 341 TLH 343 TL Sbjct: 306 TLR 308 >UniRef50_Q89CX9 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89CX9_BRAJA Length = 337 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 105/295 (35%), Gaps = 14/295 (4%) Query: 59 PGKFHGEFTEILLDDIQV-FREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQ---C 114 P F G +LL I + F Y + + + I +GS Sbjct: 49 PADFEGVANYLLLSKIGLGFCGYGAKTVVEFPEG--DFARLQIGLKGKAGVILGSTATIP 106 Query: 115 LGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEV 174 + + P G + + L + + + L R + Sbjct: 107 VNEQQPGITPPGQPTTIVFEPGFEQLILRIKTGALENALTTLLGAKP-----RGSLVFDP 161 Query: 175 KEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPM--VTAES 232 K +++ + ++ + +L + + + L + ES Sbjct: 162 TAPPKPPTAQLLRELIMFLANQLNSMAAQLPKSMLQELEQALIVSFLSAHRHNFTELLES 221 Query: 233 ISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRI 292 + + ++ A EYV N + +T+ +L +Q + S R+L AF G P + K + Sbjct: 222 SATEPAPLVVRLAEEYVEANWARAITIEELASQTNTSIRSLYAAFKKYRGYSPMRFAKTV 281 Query: 293 RLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 RL R+ L+ + +V A + GF +LG FA D++Q+F E PS + R Sbjct: 282 RLRRARQMLLEGNPK-TSVSQIAFKCGFGNLGHFAGDFRQMFGELPSEVFARAQR 335 >UniRef50_C5CKJ0 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CKJ0_VARPS Length = 329 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 56/327 (17%), Positives = 105/327 (32%), Gaps = 9/327 (2%) Query: 22 KLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYD-QLHPGKFHGEFTEILLDDIQVFREY 80 + ++T+ E W ++ ++ G+ + L + + Sbjct: 5 PGVDASPLYRRRVFRSTNPQEARAVHGRWIADHELRIGQGEVDASLCALPLRSVHMLLIR 64 Query: 81 TGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCL--GSAEIATRPGGTEFELSTPDDYT 138 G + + IP + Q L S + A + Sbjct: 65 YGPEAEILSPAFDDFSLIQIPLSGSADIVCDGQALSLDSGQSALLSPRRALRVRWSPGSE 124 Query: 139 ILGVVLSEDVITRQANFLHNPDRVL--HMLRNQSALEVKEQHKAALWGFVQQALATFCEN 196 L + + ++ A+ + A VQ +A Sbjct: 125 QLLLRVPHALLRATASDTGLGPDAASGAPPWPAPLAIIDRVAGARWRPIVQSLIALGPST 184 Query: 197 PENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEP 256 + + + L L Q + + +L A Y+ N++ P Sbjct: 185 EDARGAHPAWERHCETGLALFLLTLASEQAGAGLAA--PCGHSGVLKAAGRYIQANLASP 242 Query: 257 VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAM 316 + + D+ VS RTL G+ P AWL+ RL+A R +L + ++ + A+ Sbjct: 243 IALGDVAQAAGVSERTLHTHVTRAFGVRPMAWLRLQRLDAARAQLRRGEAP--SIAEVAL 300 Query: 317 QWGFWHLGQFATDYQQLFSEKPSLTLH 343 + GF HLG+FA Y++ F E PS T Sbjct: 301 RCGFAHLGRFAAYYRERFGELPSETQA 327 >UniRef50_C3UVB3 Putative AraC family transcriptional regulator n=1 Tax=Burkholderia sp. JS667 RepID=C3UVB3_9BURK Length = 323 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 68/335 (20%), Positives = 112/335 (33%), Gaps = 21/335 (6%) Query: 19 ENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYD---QLHPGKFHGEFTEILLDDIQ 75 E LKL P + + DV E I+ Q + G F + LD I Sbjct: 3 EVLKLNPTPVLRTHRLFDSADVDETRERISGIMQPHRLTPAWQAGPFRAHMDFVRLDRIG 62 Query: 76 VFREYTGL-ALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTP 134 G + L + F + G + G + Sbjct: 63 FGTIGFGAMEVETQSLADYHLLIFCLRGRAQAVLPRGEVAIEQTRGVALNPGDRLLVRFS 122 Query: 135 DDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFC 194 +D V + ++ R +SA++V + VQ LA Sbjct: 123 EDSEQFVVRIDRRLL----------HPGKGGYRLRSAIDVGRPEMGPFFRQVQSLLADPD 172 Query: 195 ENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMS 254 P + L+ + + S + + A Y+ ++ Sbjct: 173 MVALARSDPRLALDCERFLVSLL------TRGQGDVASRAPSLAPGAVRLAESYIEAHLH 226 Query: 255 EPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDA 314 E +T+ D+ + V RTLQ +F G P L+ RL+AVR+ ++S + + Sbjct: 227 ESITLDDIAKSVGVPVRTLQESFRRFRGSSPTQALREFRLDAVRKGILSGEGERG-ISMV 285 Query: 315 AMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREW 349 AM GF HLG+FA + F E+PS T R + + Sbjct: 286 AMDCGFNHLGRFAAASRARFLERPSETAACRPKNF 320 >UniRef50_C5CKL4 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CKL4_VARPS Length = 320 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 57/331 (17%), Positives = 112/331 (33%), Gaps = 36/331 (10%) Query: 37 TTDVYEHALTITAWQ----QIYDQLHP--------GKFHGEFTEILLD--DIQVFREYTG 82 +TD + W +Y QL G F G + L D+ V R Sbjct: 6 STDAVPRGQRLAYWTDMICNVYVQLGCDPVREGDSGNFEGSIRQHTLPSLDVSVVRSGPQ 65 Query: 83 LALRQSC---LVWPNSFWFGIPATRGEQGFIGSQ--CLGSAEIATRPGGTEFELSTPDDY 137 +R + F I A + L + + A ++L D + Sbjct: 66 KVMRTPGHISRSGDDCFLVSIQARGQGVVRQDGRDAVLAAGDFALYDSTRPYQLLFDDSF 125 Query: 138 TILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENP 197 + + L + + + ++ + + + T E+ Sbjct: 126 EQIVLKLPGERLR------------SELHHTEALTATTVSGREGAGHLLLGMIRTLREDI 173 Query: 198 ENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEP- 256 + L QPA + + + + A L+ + S + L+R + + E +++P Sbjct: 174 DTL-QPASALAVANGVQSILVAGLQTLPAARSPGLSSLTA--YHLARVKRRIDEQLADPS 230 Query: 257 VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAM 316 ++V L QL VS + F + + P+ ++ RL A R+L+ V + A Sbjct: 231 LSVGSLAAQLGVSASHIHRVFKSEP-LTPSQYIWERRLEACSRDLLEARLAGRPVAEIAY 289 Query: 317 QWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 GF F+ +++ F P QR++ Sbjct: 290 GRGFNDAAHFSRAFRERFGCSPREWRQQRVQ 320 >UniRef50_B2T964 Transcriptional regulator, AraC family n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2T964_BURPP Length = 324 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 64/308 (20%), Positives = 117/308 (37%), Gaps = 14/308 (4%) Query: 51 QQIYDQLHPGKFHGEF----------TEILLDDIQVFREYTGLALRQSCLVWPNSFWFGI 100 Q +D ++ G F + LD+I++ + + PNS G Sbjct: 18 SQAFDIVYGGSFEHRLLSSKRANMTHQRLTLDEIRLETGCYDFPVIAQGSMPPNSMCIGF 77 Query: 101 PATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPD 160 A + + +G +I P G E + + E+ + A Sbjct: 78 MADGSDVTRYNTVAIGQEDIQIYPAGVELLYHAVGASRWVNFTVPEERLQETALARTGR- 136 Query: 161 RVLHMLRNQSALEVKEQHKAALWGFVQQALATFCE-NPENLHQPAVRKVLGDNLLMAMGA 219 + +++ ++ +AAL A+ P P + +L+ Sbjct: 137 LLELPGFAATSVRLRPGGRAALTCLADDAMGIAKSLEPTGGMAPEFATEVSRSLVAGYVD 196 Query: 220 MLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSE-PVTVLDLCNQLHVSRRTLQNAFH 278 L A P +ES S + L A E ++ + E + + ++ + S R+L+ F Sbjct: 197 ELANATPGGQSESSSGERRHHHLILACERLVVSGEEADIALAEIARRSGYSLRSLELIFR 256 Query: 279 AILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKP 338 +G+ P W +RLN R+L+ + TV D A +WGF H+ +F+ Y++ F E P Sbjct: 257 RSVGMTPGRWFMNVRLNGALRDLLGAGP-TCTVADVASRWGFRHMSRFSEQYRKAFGELP 315 Query: 339 SLTLHQRM 346 S TL + Sbjct: 316 SRTLSRSR 323 >UniRef50_B5W7W7 Transcriptional regulator, AraC family n=1 Tax=Arthrospira maxima CS-328 RepID=B5W7W7_SPIMA Length = 342 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 66/308 (21%), Positives = 117/308 (37%), Gaps = 7/308 (2%) Query: 41 YEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGI 100 + + W L G F E E+ I++ +T ++ F + Sbjct: 24 DSQSEVLPTW-IEGFHLGEGVFRIEHREVAFPGIEIAHFFTENLFSDRHVIPEGETHFSL 82 Query: 101 PATRGEQG--FIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHN 158 ++G IA E+ P + L + +++++ + L Sbjct: 83 SLYPHHPILSWMGYTDPIGNAIAVHRSQIEYTSGLPPGWHGLYICFNDELLA-NLDLLPE 141 Query: 159 PDRVLHMLRNQSALEVKEQHKAALWGFVQQAL-ATFCENPENLHQPAVRKVLGDNLLMAM 217 NQ+ L V A F+QQ C L P +L + L Sbjct: 142 KFWENSQDPNQAVLTVHPIRFANFTRFMQQWFPTAECLYRRGLLTPQEAALLREKFLCQF 201 Query: 218 GAMLEEAQPMVTAESISHQSYRRLL-SRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNA 276 +L+ I + R + + + + N+++ T +LC Q +S R +Q A Sbjct: 202 RELLDHTFEQRGDRQIFKPTRRYWIFATVQAMIDSNLAKNFTNEELCQQCCISPRAMQYA 261 Query: 277 FHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSE 336 F I G+G +++ +LNAVR EL P + T+ A +GF H+G+F+ + + F E Sbjct: 262 FKEITGVGVQQYIRARKLNAVREELCGPSADPSTIYAIASAYGFSHMGRFSEQFYRCFGE 321 Query: 337 KPSLTLHQ 344 PS TL + Sbjct: 322 YPS-TLKK 328 >UniRef50_A3YW71 Transcriptional regulator, AraC family protein n=3 Tax=Chroococcales RepID=A3YW71_9SYNE Length = 337 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 67/311 (21%), Positives = 122/311 (39%), Gaps = 11/311 (3%) Query: 48 TAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQ 107 QL G+ G +LL +++ R ++ + S + R Sbjct: 20 LGLSLKITQLAGGELSGTLLPLLLGPLRLLRIRVDRSVHCAGPKPRGSQIVAMDLDRDLD 79 Query: 108 G--------FIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNP 159 G Q L + E L+T + +++ + +A+ L Sbjct: 80 GDVTSPALMRSHGQPLLPRALFGLSCAGEVHLTTFGPCDMALLLIHREEFLHRADRLGCS 139 Query: 160 DRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGA 219 VL + ++ L + A L ++ Q +T +P +++ ++L+ M Sbjct: 140 --VLEQVLPRNWLTLDPGRFARLRRYLHQLFSTLETDPTLQQVAGFDELVSNDLIPLMLE 197 Query: 220 MLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHA 279 L S L+ A+ ++ + +P+ + LC ++H SRR+L F Sbjct: 198 ALIHG-GHAGDSLPRAPSRIELVKAAQRWMEAHPRQPIHLEGLCREVHTSRRSLIQGFRE 256 Query: 280 ILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 LG+GP +L+ RL+ +R+EL+ MT+ A WGF + G FA Y LF E+PS Sbjct: 257 HLGMGPMTYLRLHRLHGIRQELLGADPSQMTIGSRAAAWGFLNPGHFARQYANLFGEQPS 316 Query: 340 LTLHQRMREWG 350 T+ + G Sbjct: 317 ETVGRLRSLPG 327 >UniRef50_A5V6I0 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V6I0_SPHWW Length = 330 Score = 167 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 107/307 (34%), Gaps = 18/307 (5%) Query: 55 DQLHP-------GKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQ 107 DQL P G F F I + + G + + + ++ + Sbjct: 25 DQLAPHRLRAGVGPFDARFRSIHIGSAVLLDIAYGTDVEIEAEAYKDLYFVHAATSGRGV 84 Query: 108 GFIGS--QCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHM 165 GS + A + G + + + + + DVI + L N + + Sbjct: 85 AEAGSKSYEIRPANLLISDPGQQARVRWDRESRHRTLRIKRDVIEDRLRELLNKN-LHDP 143 Query: 166 LRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQ 225 + + + A + + PE + ++ + L+ + E Sbjct: 144 ITFEPNVSDDLPLTAMWRSTISYVYQQVVDFPELSSAAHMGRMYLNILVDMLLLNQEHNY 203 Query: 226 PMVTAESISHQSYRRLLSRAREYVLENM------SEPVTVLDLCNQLHVSRRTLQNAFHA 279 + ++ + + +A++Y+ + + E + + + +S RTLQ +F Sbjct: 204 SDDIRD-LTGAVHPWHVRKAKQYIDQLIEAGSFDDEELRIEAIAEYTGISTRTLQASFAR 262 Query: 280 ILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 +G P +++ ++ + L + S V D G + G+++ Y++ + PS Sbjct: 263 FVGDTPLKYIRHRKIERLHLALQNA-PTSKRVTDVMTDLGINNFGRYSGYYKRRYGTSPS 321 Query: 340 LTLHQRM 346 TL R+ Sbjct: 322 STLRDRL 328 >UniRef50_A5V4Y1 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V4Y1_SPHWW Length = 316 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 57/321 (17%), Positives = 111/321 (34%), Gaps = 18/321 (5%) Query: 32 VHQRQTTDVYEHALTITAWQQIYD---QLHPGKFHGEFTEILLDDIQVFREYTGLALRQS 88 + D++E I +D L + + G + Sbjct: 4 FAAFASEDIFEVREHIAQTYCPHDLAVARRGDALDAWLNHRRLAKLGIGAMAYGAEVAIE 63 Query: 89 CLVWPNSFWFGIPATRGEQGFIGSQCLGSAE--IATRPGGTEFELSTPDDYTILGVVLSE 146 + + P + ++ + S + G + +D V +S Sbjct: 64 RIEDQDMLLLMHPTAGAAEIGTAAETIDSHARRASVVDTGELRRMRWSEDCVQRVVQISN 123 Query: 147 DVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVR 206 V+ A + + LR + + A W + + Sbjct: 124 AVLDHHATMMMGRP-LSRKLRFAAEMP-TGAEGAGWWHYASLLCLEVSAEAQG------- 174 Query: 207 KVLGDNLLMAMGAMLEEAQPMVTAESISHQS---YRRLLSRAREYVLENMSEPVTVLDLC 263 + + D+L + L E+ P ++ + Q + + + +Y++ + P+T+ L Sbjct: 175 QAVIDSLETLLILKLLESHPSNYSDQLRPQRCKIAPQHVRKVEQYIIAHADRPITLEQLV 234 Query: 264 NQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHL 323 VS R L + F G P +LK +RL R +L + +V + A +WGF+ Sbjct: 235 EVSGVSARALFDGFRRFRGTSPMVFLKSVRLERARDDLRNALPGE-SVTEIACRWGFYQF 293 Query: 324 GQFATDYQQLFSEKPSLTLHQ 344 G+FA Y++LF E PS TL + Sbjct: 294 GRFAAHYRRLFGELPSETLRK 314 >UniRef50_C4KBC2 Transcriptional regulator, AraC family n=1 Tax=Thauera sp. MZ1T RepID=C4KBC2_THASP Length = 323 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 42/290 (14%), Positives = 95/290 (32%), Gaps = 12/290 (4%) Query: 63 HGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLG--SAEI 120 + + + R G R + + + ++ L + + Sbjct: 43 SASLSHRRAGTLDLCRLSYGAQARVLSESLGDIYHAQFILQGYCSYTLANRTLDLPAGHV 102 Query: 121 ATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKA 180 +L+ D+ V + ++ H + ++ + Q Sbjct: 103 LVLNPDEPVDLTYSDNCEKFIVRIPSAMLDDACTE-HRWFKPNERIKFSP----EPQRFE 157 Query: 181 ALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRR 240 + + E L P + + + + ML+ M ++ + Sbjct: 158 DIDSLLLLLRLLCEEAESELATPQMLQHYCRVVTTKLMVMLKHNVSM-----VAPTRHAP 212 Query: 241 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE 300 R Y+ N+ ++ DL + +S R+L F + P ++++ +L V Sbjct: 213 SFERLVNYIERNIKLDLSAEDLAHYAGLSLRSLYLLFEKNVKTTPKNFVRQKKLEKVHSI 272 Query: 301 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 L P V A+++GF HLG+F+ Y+ + PS ++ R + G Sbjct: 273 LSDPGQACPNVTAVALEYGFSHLGRFSELYKSTYGVLPSQSIRCRQPQAG 322 >UniRef50_B9JL66 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JL66_AGRRK Length = 328 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 110/279 (39%), Gaps = 5/279 (1%) Query: 67 TEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCL--GSAEIATRP 124 + V+ ++ + P+++ +P++ + +GS+ L Sbjct: 46 RHFSVGRYSVWNGRCQSGMQVTLSRAPDAYALYLPSSGVMEIDVGSKRLISKPTTALLGD 105 Query: 125 GGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWG 184 L+ + + +GV + + +Q + L + + + +++ A + Sbjct: 106 MSCFERLTLHEGRSHMGVAFEKSAMIQQLSELLDAPVI-GGIDFADTIDLATAKGARVAA 164 Query: 185 FVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSR 244 + A + L +++A+ + + IS + L R Sbjct: 165 LSHLVWRCLNVEETDRPSSAFVERLLQAMMIALLETVPNNYSARLTKPISPAI-PKRLKR 223 Query: 245 AREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISP 304 A EY+ N+S P+ V D+ + S R LQ AF P +L+ IRL+ R+ L P Sbjct: 224 AIEYMHSNISSPMGVADIAREAGTSVRALQAAFQQFKDTTPLNYLRTIRLDGARKTLTDP 283 Query: 305 WSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 S++V + A WGF H+G+FA Y Q F E PS T Sbjct: 284 AI-SLSVAEVARNWGFSHMGRFAALYHQSFGEMPSSTAK 321 >UniRef50_UPI00016A2E59 transcriptional regulator, AraC family protein n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A2E59 Length = 337 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 73/337 (21%), Positives = 117/337 (34%), Gaps = 14/337 (4%) Query: 14 HEPLPENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHG---EFTEIL 70 H P L P ++ +D EHA T + G+ ++ Sbjct: 10 HPPTRHFPPLLPGSDIPRGALLFQSDDLEHARTRIGRIYRPYRFTAGERRTMPVTMFKLD 69 Query: 71 LDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIG--SQCLGSAEIATRPGGTE 128 + + + G + + N + G Q G+ Sbjct: 70 GNGMALTWFAYGTDISIQPEISGNFALVLTTLAGHSEARSGRVEQVGGTGSTVLVASNAR 129 Query: 129 FELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQ 188 D LGV + I + + + + A V+Q Sbjct: 130 SAFRYSADNVQLGVRIDAGRIADIWRSIAGREPPAALPLPAPFDAPRRDRWLASVQLVRQ 189 Query: 189 ALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREY 248 L + P L + + L+ +G L +A P + RA + Sbjct: 190 LLDP--DTPAALRAMQLPRAEEILLMSLVGEQLTDALPAE------GGIASACVRRAVAF 241 Query: 249 VLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQS 308 + E+ P+T+ D+ H S RTL AF +G LK +RL VR L P + Sbjct: 242 IEEHAERPLTLTDIAAASHCSVRTLHRAFQQWRDVGVMRHLKDVRLRRVRMALQDPDETA 301 Query: 309 MTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 ++ + A +WGF HLGQFATDY++ F+E+PS T QR Sbjct: 302 -SITEIATRWGFAHLGQFATDYRKAFNERPSDTRAQR 337 >UniRef50_A5V7Y2 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V7Y2_SPHWW Length = 326 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 100/326 (30%), Gaps = 21/326 (6%) Query: 27 VEVDNVHQRQTTDVYEHALTITAW----QQIYDQLHPGKFHGEFTEILLDDIQVFREYTG 82 ++ + DV E I+A + + +H I V Sbjct: 7 PALEGHRVFASRDVEETEAQISALLQPHRLRPTTISAD-YHANMDFFRFSSIGVGSIAYS 65 Query: 83 LALRQSCLVWPNSFWFGIPATRGEQGFIGS--QCLGSAEIATRPGGTEFELSTPDDYTIL 140 + + + + + +G G DD + Sbjct: 66 RPMSLQLEEIADYYLLMFCRRGSARLIRNGGEEWVGRRHGVCIAPGEPLHAEFTDDCEQI 125 Query: 141 GVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENL 200 + + R A + +++ + A FV+ L+ Sbjct: 126 VFKVDARTLCRHAGR--------KAPLMRQRIDLADTLFAPWRTFVRGMLSDPATVDFAT 177 Query: 201 HQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVL 260 V L + +V + RA Y+ ++ ++P+T+ Sbjct: 178 SNTRVAAEYESLFLSTLL-----QGGLVDNGRADSGIAPISVKRAEAYIDDHFADPITLD 232 Query: 261 DLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGF 320 D+ V RTL N F P L+ RL A L++ S ++ D A+ GF Sbjct: 233 DIAAAAGVPARTLLNGFRRFRDTSPIRALRERRLTAAHERLLAAESDQ-SILDIALDVGF 291 Query: 321 WHLGQFATDYQQLFSEKPSLTLHQRM 346 H G+FA Y + F EKPS TL +R Sbjct: 292 GHPGRFALAYTERFGEKPSTTLRRRR 317 >UniRef50_B8H6K6 Transcriptional regulator, AraC family n=2 Tax=Actinomycetales RepID=B8H6K6_ARTCA Length = 321 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 58/327 (17%), Positives = 119/327 (36%), Gaps = 25/327 (7%) Query: 25 PKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREY-TGL 83 P + + D ++H + + + G FHG+ +LD + + T Sbjct: 10 PASQSLTTSTASSFDHWKHLVAESFVPLAAETADAGNFHGQLRSRVLDRMSIVEVTATSH 69 Query: 84 ALRQS----CLVWPNSFWFGIPATRGEQGFIGSQ--CLGSAEIATRPGGTEFELSTPDDY 137 + ++ F + ++ L ++A + L+ D Sbjct: 70 EVHRTPALIARAHERYFKLNLQLEGTGLLIQDNREAVLRPGDLAIYDTSRPYTLAFEDTT 129 Query: 138 TILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENP 197 I+ V+ D +T +++ V+ + L G V Q + N Sbjct: 130 RIMVVMFPCDTLTLPTDYVGQLA------------AVRMAGDSGLSGIVGQFIRQLSGNL 177 Query: 198 ENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPV 257 + L+ P+ ++ + L + + + A+ ++ + + Q+ + REY+ N+S+P+ Sbjct: 178 DVLNGPSGSRLAANAL--DLVSTMLHAEMDISPDRMKPQALLAV--AVREYIDANLSDPL 233 Query: 258 -TVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAM 316 + + +S R L N FH G W++ RL R+L P + V A Sbjct: 234 LSPASIAAAHFISTRHLHNVFHES-GTTVAGWIRTQRLEGAGRDLRDPLHAGLPVGAVAA 292 Query: 317 QWGFWHLGQFATDYQQLFSEKPSLTLH 343 +WGF F+ ++ F PS Sbjct: 293 RWGFLDAAHFSRTFRDAFGVPPSDWRR 319 >UniRef50_Q0SCS8 Transcriptional regulator, AraC family protein n=2 Tax=Rhodococcus RepID=Q0SCS8_RHOSR Length = 342 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 47/296 (15%), Positives = 100/296 (33%), Gaps = 29/296 (9%) Query: 58 HPGKFHGEFTEILLDDIQVFREYTGLALRQSC------LVWPNSFWFGIPATRGEQGFIG 111 PG+F G L +Q+ E G A+ P G+ + Sbjct: 37 GPGRFTGTLRTTALGGLQLS-EVGGHAVDVRRTRTSIKRSDPGLVKVGLQLSGSGVIVQD 95 Query: 112 SQ--CLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQ 169 + LG + A ++L D+++ ++ +++ + L Sbjct: 96 DREAVLGPGDFAVYDTSKPYDLHFAGDFSMFVLMFPRELLRIASRELG------------ 143 Query: 170 SALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVT 229 + + + + V L + P ++ D +L +GA ++ P Sbjct: 144 TVSARRIRGSTGMGALVSPFLTNLHHSVVTGTMPT-TPLVEDAVLDLLGAAVQSEAPADA 202 Query: 230 AESISHQSYRRLLSRAREYVLENMSEP-VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAW 288 + LL + ++ ++ +P + + HVS R LQ F A G W Sbjct: 203 TAPGAS-----LLLAVKSFIDAHLHDPTLDTAAVAAHHHVSTRHLQKMFEAD-GHTVAGW 256 Query: 289 LKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 ++ RL RR+L + ++ ++G + F+ +++ + P Q Sbjct: 257 IRHRRLEKCRRDLKDIRFRGDSIGTICARYGLVNSSHFSRLFKETYGVSPRAFREQ 312 >UniRef50_B3QGC9 Transcriptional regulator, AraC family n=5 Tax=Rhodopseudomonas palustris RepID=B3QGC9_RHOPT Length = 334 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 60/286 (20%), Positives = 108/286 (37%), Gaps = 5/286 (1%) Query: 62 FHGEFTEILLDDIQV-FREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEI 120 F G + + LD + F Y A+ + + + S + Sbjct: 53 FEGFGSYVALDGTGLGFCAYAAPAVAEFDETDFARVQIALRGSSRTSSGPSSVEVDPEHW 112 Query: 121 ATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKA 180 GT L DY + + ++ +T L + L S L ++ + Sbjct: 113 CVSSAGTPSRLEFGPDYQQMILRITSATLTTTLEALLGV-KPRGKLTFTSHLSCDDRGAS 171 Query: 181 ALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRR 240 AL +A + + P + + + L+++ ++ + + Sbjct: 172 ALRDLALY-VARHVDPAAPVMPPFMLREMQQALVVSFLSVTRHNYSSQLDRD-ARDTAPD 229 Query: 241 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE 300 + A E++ + + +T++DL +V R+L AF G P A+ K +RLN R Sbjct: 230 YVRVAEEFIEASWNRAITIVDLAAVTNVGVRSLFKAFQKHRGYSPMAFAKAVRLNKAREM 289 Query: 301 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 L+S S +V A GF +LG FA DY++ E PS TL +R Sbjct: 290 LLSGDP-SRSVTSVAFACGFTNLGHFANDYRRRHGELPSETLARRR 334 >UniRef50_Q9AJR3 Transcriptional activator n=2 Tax=Proteobacteria RepID=Q9AJR3_BURST Length = 321 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 66/327 (20%), Positives = 116/327 (35%), Gaps = 22/327 (6%) Query: 26 KVEVDNVHQRQTTDVYEHALTITAWQQIYDQL-HPGKFHGEFTEILLDDIQVFREYTGLA 84 + DV + + QL H DI + G Sbjct: 11 STKSSIFDSADPRDVSAYVNAFVG--RHSIQLTSATTAHARLLFRKFSDIGLCDISYGNQ 68 Query: 85 LRQSCLVWPNSFWFGIPATRGEQ--GFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGV 142 + + +S+ + G E + +D L V Sbjct: 69 VDITTEALVDSYQLQVLLRGTFAWTGAESRHQFKPGEFLLVNPSDPIRVRYSNDCEKLIV 128 Query: 143 VLSEDVIT--RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENL 200 L +V+ R P + LR AL + + L+ CE E+ Sbjct: 129 TLPVEVLEAMRFEERQSWPHDGIRFLRPVHALSSVDG--------LAGLLSLMCEEAEST 180 Query: 201 H-QPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTV 259 PA+++ LL + + LE + S ++ S+ ++Y+L N+ E +T+ Sbjct: 181 TCTPAIQQHYAQILLRKLLSQLETNTVDARSPGDS-----QVFSKIKDYILANLQENITL 235 Query: 260 LDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWG 319 ++ + +VS R L F+ P +++ ++L VR +L V D AM++G Sbjct: 236 EEIASLANVSLRKLYVLFNIHAQESPRDFIQSLKLGRVRADLQRARPSD-NVTDIAMRYG 294 Query: 320 FWHLGQFATDYQQLFSEKPSLTLHQRM 346 F HLG+F+ Y+ F E PS TL + Sbjct: 295 FSHLGRFSAVYKARFGELPSQTLGRSR 321 >UniRef50_A1K4I0 Putative AraC-family transcriptional regulator n=3 Tax=Proteobacteria RepID=A1K4I0_AZOSB Length = 346 Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 55/324 (16%), Positives = 105/324 (32%), Gaps = 20/324 (6%) Query: 40 VYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFG 99 V HA + + G ++ + + G + + + Sbjct: 24 VTSHAQLSRELSEHDLEWRRGSVDTALFRADVNRMSLLALRYGAEVEVRPEPFKDFALVQ 83 Query: 100 IPATRGEQGFIGSQ--CLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLH 157 +P + + E A + L L + + +++ + + Sbjct: 84 MPLRGAAEIECDGVRLTVAQGEAAVVAPRRQIRLVWQPGCEQLLLKVPFELLRQVSCHTC 143 Query: 158 NPDRVLHMLRN-----QSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDN 212 R + + A ++ VQQ L E P Sbjct: 144 IRSRCPDDASDCGVGLEPAFVIERGFNLQWRALVQQLLNLLPAPGEAGLHPGWLNQFEQT 203 Query: 213 LLMAMGAMLEEAQPMVTAE-----------SISHQSYRRLLSRAREYVLENMSEPVTVLD 261 + + + A A + + S + R L +Y+ + P+++ D Sbjct: 204 VALFLLAHQPAAVGRDLDDDAGPAEAVIELTASSRLAERKLDAVEDYMRSRLFAPISLAD 263 Query: 262 LCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFW 321 L VS RTL H G+ P L+ +RL+A R L+ +V + A+++GF Sbjct: 264 LAKAAGVSARTLNILCHRYRGVAPMVLLRHVRLDAARARLL--ADPFASVTEVALEYGFG 321 Query: 322 HLGQFATDYQQLFSEKPSLTLHQR 345 HLG+F+ Y++ F E P T R Sbjct: 322 HLGRFSAYYRERFGELPRDTGAAR 345 >UniRef50_A0K0Q9 Transcriptional regulator, AraC family n=2 Tax=Arthrobacter RepID=A0K0Q9_ARTS2 Length = 319 Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 107/294 (36%), Gaps = 25/294 (8%) Query: 58 HPGKFHGEFTEILLDDIQVFREYTG-----LALRQSCLVWPNSFWFGIPATRGEQGFIGS 112 HP F G +LD + + F + + Sbjct: 41 HPDTFRGRMRSRVLDRLCIVEVSASGHSVHRTPALVARPGQRYFKLNLQLEGTGLLIQDN 100 Query: 113 Q--CLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQS 170 + L ++A + L+ + ++ V+ D ++ +++ Sbjct: 101 REAVLRPGDLAIYDTNRPYTLAFEEQARVMVVMFPHDSLSLPPDYVGQ------------ 148 Query: 171 ALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTA 230 V+ L G V +A EN E L P+ ++ + L + + + ++ + Sbjct: 149 LSAVRLAGGHGLTGIVGPFIAQLAENLEALSGPSGSRLAANAL--DLVSTMLHSELDMAR 206 Query: 231 ESISHQSYRRLLSRAREYVLENMSEP-VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWL 289 +S+ Q L + REY+ N+++P ++ + +S R L N FH G +W+ Sbjct: 207 DSMKPQVL--LATSVREYIEANLADPQLSPASIAAAHFISTRHLHNIFHE-TGTTVASWI 263 Query: 290 KRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 + RL +RR+L P +V A +WGF F+ ++ + E PS Sbjct: 264 RSQRLERIRRDLRDPLLNGTSVGAVAARWGFLDAAHFSRTFRDAYGESPSDWRR 317 >UniRef50_Q0RUS5 Possible transcriptional regulator, AraC family n=2 Tax=Rhodococcus RepID=Q0RUS5_RHOSR Length = 352 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 108/291 (37%), Gaps = 9/291 (3%) Query: 63 HGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLG--SAEI 120 E + + L+ + + R G R ++ +P GSQ + Sbjct: 64 SAELSAVRLNYLTIGRARFGSEARVDP-GDLGTYHVNVPLEGSVVSVCGSQQMTATPQHA 122 Query: 121 ATRPGGTEFEL-STPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHK 179 A L D T + + + + + L + +R AL++ Sbjct: 123 AVFSPNEHTILPRWDADATQICIKIDRAGLQGELAQLLGRP-IDQRIRFDLALDLTTPAG 181 Query: 180 AALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQS-- 237 A L + ++P + P + + + +L ++AE + Q Sbjct: 182 ARWLSL-LNLLLSTLDDPGLVPTPGLAAHVNYLERALIAGLLVHHTHSMSAELNAPQPVR 240 Query: 238 YRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAV 297 + + + T+ DL + R LQ F G+ P+ +L+ +RL+ V Sbjct: 241 SPHAVQKVLDQFESVPGAQYTIGDLAAIAGIGARQLQKLFQDQFGMPPSVYLRHLRLDGV 300 Query: 298 RRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMRE 348 R +L+ ++ TV A +WGF HLG+FA Y+ F E PS TL +R+ Sbjct: 301 RHDLLLGD-ENTTVGHTAFKWGFNHLGRFANSYEDKFGESPSHTLRAAIRK 350 >UniRef50_Q05X95 Transcriptional regulator, AraC family protein n=1 Tax=Synechococcus sp. RS9916 RepID=Q05X95_9SYNE Length = 342 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 70/339 (20%), Positives = 111/339 (32%), Gaps = 25/339 (7%) Query: 17 LPENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYD--QLHPGKFHGEFTEILLDDI 74 LPE L P + E A + + QL PG G F+ + L ++ Sbjct: 20 LPERLTSCPNWDTS------FFSACELAQCFAKIGKAFTAVQLSPGPLAGRFSMVHLGNL 73 Query: 75 QVFREYTGLALRQSCLVWPNSFWFGIPATRGE-QGFIGSQCLGSAEIATRPGG-TEFELS 132 V T L + + F + T + Q + E Sbjct: 74 SVLMISTNQVLLLNGERGHHCIGFSLEVTGNTTDQRVQCQTFHPHALYGFNQNLQECHFQ 133 Query: 133 TPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALAT 192 + V + D P + L + L + + L + + L Sbjct: 134 LSAGSISIITVTTSDFFNAFLTRTGYPHLI-EPLLTSNCLNLDQATHRRLANQLGEVLR- 191 Query: 193 FCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQ-PMVTAESISHQSYRRLLSRAREYVLE 251 H P ++ + + L+ Q P E S ++L+ + + Sbjct: 192 --------HPPTSQRACRQRTQELLTSFLDCLQSPTGELEPFDLTSRQQLVQEFVRWGIS 243 Query: 252 NMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSM-- 309 N +T+ ++C QL+ SRRTL GP L+ IRL V L SP + Sbjct: 244 NAKTSLTLDEICQQLYTSRRTLILGTKENFHCGPMELLRTIRLQQVHALLRSPAERDREG 303 Query: 310 --TVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 V + A GF G FA YQ+ F+E P TL + Sbjct: 304 LSQVSEVAAFCGFRSRGHFAKAYQEHFAESPRTTLLRSA 342 >UniRef50_A9EZ15 Transcriptional regulator, AraC family protein n=2 Tax=Phaeobacter gallaeciensis RepID=A9EZ15_9RHOB Length = 335 Score = 164 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 99/282 (35%), Gaps = 6/282 (2%) Query: 65 EFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCL--GSAEIAT 122 + + + G + + + + IP + + ++ Sbjct: 52 RHNHVAGRHSSINYLHYGADVTIDPGMLDSFYLLQIPLSGQASVRHRGSDIIASASTATL 111 Query: 123 RPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAAL 182 + + D L + + + A + + + +R S +++ + L Sbjct: 112 LNPDRDTTMQWGADCRKLLLQIDRGYLETVARQIIRAE-LPGPIRFASRIDLHSEGGRRL 170 Query: 183 WGFVQQALATFCENPENLHQPAVRKV-LGDNLLMAMGAMLEEAQPMVTAESISHQSYRRL 241 V + + + + ++L A+ L E H S Sbjct: 171 RQMVCACVQAAEAGVLFQGALSGSDLRVEEDLARALLTRLPSNISH-IVERADHGSLPPG 229 Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 + A EY+ N+S P+ + D+ + ++ RTLQN F G P L+ RL+A L Sbjct: 230 IRAAVEYIHANLSNPIQLSDIAAHVDLNIRTLQNGFRRAFGQSPMRVLRNARLDAAHYHL 289 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 + + + V AA GF HLG+FA DY+ F PS T Sbjct: 290 M-AQTDTPDVTTAAFSNGFSHLGRFARDYKARFGHSPSHTAR 330 >UniRef50_Q1Q9Q6 Transcriptional regulator, AraC family n=2 Tax=Gammaproteobacteria RepID=Q1Q9Q6_PSYCK Length = 284 Score = 163 bits (414), Expect = 5e-39, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 92/250 (36%), Gaps = 15/250 (6%) Query: 97 WFGIPATRGEQGFIG--SQCLGSAEIATRPGGTEFELST-PDDYTILGVVLSEDVITRQA 153 I + ++G Q ++ + P + +VLS + Sbjct: 45 SICIVLQGEREIYLGKDCQKFDNSSLMFCPVDIPLSMHIKHASSDHPVIVLSMKLNLVMI 104 Query: 154 NFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNL 213 + R +VKE + W + F L P L + Sbjct: 105 QEVLA--------RIPPQQQVKEGYLGIKWQLDDAIMQAFERLVNLLDCPNDTGFLSSLI 156 Query: 214 LMAMGAMLEEAQPMVTAESIS-HQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRT 272 + L AQ + + S+ +++A +++ ++ EPV + DL ++ +S Sbjct: 157 QQEIYYRLLSAQQGNKLRQLVINGSHTHRIAQATDWLKAHLDEPVVIGDLASRCGMSISG 216 Query: 273 LQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQ 332 F I + P + K++RL RR +I+ SQ + AMQ G+ QF+ +Y++ Sbjct: 217 FHQHFKEITQLSPLQYQKKLRLMEARRLIITNDSQ---ISQIAMQVGYESPSQFSREYKR 273 Query: 333 LFSEKPSLTL 342 LF P+ L Sbjct: 274 LFGNSPNSDL 283 >UniRef50_A5INH3 Transcriptional regulator, AraC family n=5 Tax=Thermotogaceae RepID=A5INH3_THEP1 Length = 299 Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 92/279 (32%), Gaps = 15/279 (5%) Query: 69 ILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSA-EIATRPGGT 127 L + V R + L I ++ IG + E Sbjct: 26 RPLPGLTVGRRESPTEPSTYILPPS----ICIAVQGAKRVLIGEEYYVYDVENFLLNS-- 79 Query: 128 EFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQ 187 P ++ + I + + + + + +L Sbjct: 80 ---FDIPVIAQVIEASKEKPYIGITWEIDMEILMEIVVEQKLNTRPIASSRGTSLGKVTY 136 Query: 188 QALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRARE 247 Q L F + L +P L + + L ++ I+ +++ A Sbjct: 137 QLLDAFKRMLDLLDEPEHISALLPVIKKEIIYRLLVSEQGSKLIQIALSGKNDVIA-ALN 195 Query: 248 YVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQ 307 Y+ E+ SEPV + L + +S T F + G+ P + K++RL R+ L++ Sbjct: 196 YLKEHFSEPVNMKKLAEMVGMSVSTFYQNFKTLTGMTPLQYQKKLRLCEARKLLMAGHD- 254 Query: 308 SMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 V AA Q G+ L QF+ +Y++ F PS + Sbjct: 255 ---VTTAAYQVGYESLSQFSREYKRFFGVSPSQDAKRLR 290 >UniRef50_D2M666 Transcriptional regulator, AraC family n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2M666_RHOPA Length = 328 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 52/329 (15%), Positives = 119/329 (36%), Gaps = 15/329 (4%) Query: 29 VDNVHQRQTTDVYEHALTIT----AWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLA 84 + + ++D+ E A ++ + +++ F + L + + T Sbjct: 3 LGRFPEIVSSDIDELAASLIANAGGRRFDFEK-SDELFVFRVNAVRLTQVGLIWIATNNK 61 Query: 85 LRQSCLVWP-NSFWFGIPATRG---EQGFIGSQCLGSAEIATRPGGTEFELSTP-DDYTI 139 + + F + + + I L + P ++ + + Sbjct: 62 VTVNFGATEYARRVFQLRNSAQVQIGRQRIDCTPLDAG-FIVPPDCEDWSVEYGKGGFEC 120 Query: 140 LGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPEN 199 L + + + ++R+ L D + +Q + A L V Q E ++ Sbjct: 121 LSLRVDGEALSRKLQTLTGLDSTPTVTLSQPN-RNDVRRDALLRQAVCQFAIELDEFGDH 179 Query: 200 LHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTV 259 P L+ Q + + + S + ++R +Y+ N + + + Sbjct: 180 F-TPHAIAEFEHELIFRFLLHTNHNQNHLLERTPTLGSAGQ-MARIEDYIYANWDKQLDI 237 Query: 260 LDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWG 319 L + VS RT+ F A P+ +++++RL+ R+ L+ + +T+ A + G Sbjct: 238 DQLAHVASVSGRTIFRMFRARHSCSPHHFIQQVRLHRARQLLLEA-ADGLTISGVAFRCG 296 Query: 320 FWHLGQFATDYQQLFSEKPSLTLHQRMRE 348 F + G FA Y+ +F E PS T+ + Sbjct: 297 FTNPGYFARSYRDIFGELPSDTVKRPRSR 325 >UniRef50_UPI0001B566E3 AraC family transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B566E3 Length = 308 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 50/284 (17%), Positives = 83/284 (29%), Gaps = 4/284 (1%) Query: 62 FHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLG--SAE 119 L DI + G + F IP G + Sbjct: 26 LDAWMRTKKLRDIGMVLVGYGSEVVIEPRPLKEFFVVMIPLAGHALVRSGDNEIESHPGL 85 Query: 120 IATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHK 179 + D L V + + + ++V + Sbjct: 86 ATIPDPDQPLSMRWSADCVKLIVRIERSALEEFLREHAGHLLDDGPVTFHPGMDVATGYG 145 Query: 180 AALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYR 239 A + + + +L++ + + + SH + R Sbjct: 146 AGWADIARTMARDLDGTSSLFSDSFLARTWEQSLMLGLFRTQSPSY-DSRSPEPSHIASR 204 Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 R ++ A + + + EP T+ L L + +RTLQ AFH G L RL R Sbjct: 205 RHVNAALAAIRQRVDEPWTIDSLAGDLGIGKRTLQAAFHEA-GSTFTGELLEARLRKARS 263 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 L S+ V + G H G+ + Y+QLF E P TL Sbjct: 264 ILRDAAPGSLKVTGVFARCGLHHHGRASGQYRQLFGESPKETLR 307 >UniRef50_A6VRG8 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VRG8_MARMS Length = 319 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 117/293 (39%), Gaps = 12/293 (4%) Query: 53 IYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRG--EQGFI 110 + Q P + + + G+A S N+++ + EQ Sbjct: 33 HFTQSMPQERLTTLKFKEFGPLSILEYAVGIATHVSSSNVENAYFLHVILAGHSVEQHQN 92 Query: 111 GSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQS 170 G + L + + FE + D L V + D + + A + +R +S Sbjct: 93 GRRILKAGDSIFIMPKNRFEANDSADCRKLIVKIPTDFLHQTAREFGYLFPL-DPIRFES 151 Query: 171 ALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTA 230 + L+ + L + + L + +L V Sbjct: 152 KVSQFPLTG-PLFNLLNDILQQDKDE-------LYERALIYYCRLLNSGILNMFDSNVGP 203 Query: 231 ESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLK 290 ++ +S R + R R YVL+N++ + + +L + +SR++L N F G+ P+A+++ Sbjct: 204 STLPKKSLHRHIERIRNYVLDNITTDIAIDELAHLCQISRKSLYNLFERETGLTPSAYIR 263 Query: 291 RIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 R++L ++ EL + + V A+++GF +LG+F+ Y++ E PS TL Sbjct: 264 RLKLESIHSELKNNE-RIKNVTQVALKYGFTNLGRFSAQYREQIGELPSQTLR 315 >UniRef50_C6WK40 Transcriptional regulator, AraC family n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WK40_ACTMD Length = 434 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 59/324 (18%), Positives = 100/324 (30%), Gaps = 13/324 (4%) Query: 25 PKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHG-EFTEILLDDIQVFREYTGL 83 P+ H D ++A G G L +++ F E Sbjct: 119 PEERSPVEHVVDVPDDEAAEELLSAVYTRLTLRSSGPQRGLRLASAALGEVR-FDEVELR 177 Query: 84 ALRQSCLVWPNSFWFGIPATRGEQGFI--GSQCLGSAE-IATRPGGTEFELSTPDDYTIL 140 + ++ + + FG+ + G + G + Sbjct: 178 STVEAEVDPLDCHLFGLVRSGRVDTRSADGPRAHGPGDAFLVARPEDPHRARVAHGG-FA 236 Query: 141 GVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENL 200 VL ++ + A +R V + A PE L Sbjct: 237 MTVLPTSLVQQVA-------PGPEPVRFTGYAPVGPEAARGWTATRDHLRAELLTTPELL 289 Query: 201 HQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVL 260 P V L + A + ++ L RA ++ N + Sbjct: 290 TNPLVVGHASRLLAATLLAAFPNSTTADPVVEDRRDAHPDALRRALAFIDANPDRDLATS 349 Query: 261 DLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGF 320 D+ VS R +Q AF LG P A+L+++RL+ R +L S + TV A +WG+ Sbjct: 350 DVAAAARVSTRAVQLAFRRHLGTTPMAYLRQVRLDHARADLTSATTGQDTVTRIAAKWGY 409 Query: 321 WHLGQFATDYQQLFSEKPSLTLHQ 344 FA Y+ + PS TL + Sbjct: 410 GRASVFAARYRAAYGVSPSQTLRE 433 >UniRef50_B9K3F5 Transcriptional regulator AraC family n=1 Tax=Agrobacterium vitis S4 RepID=B9K3F5_AGRVS Length = 323 Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 106/318 (33%), Gaps = 14/318 (4%) Query: 31 NVHQRQTTDVYE-HALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSC 89 D + ++ + L +F + D V++ + Sbjct: 16 RFDLLTHDDNDRLQSDSLC--PVGFTSLGREPVRLKFGGTKIRDFCVWKTESATGFEARP 73 Query: 90 LVWPNSFWFGIPATRGEQGFIGSQC---LGSAEIATRPGGTEFELSTPDDYTILGVVLSE 146 V + P + + + + P T +++ ++ Sbjct: 74 RVVSDLVTIRFPISG-GLARKDGREEVNIDRGQGVIIPFRDMEYERTSRSASMISCTIAS 132 Query: 147 DVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVR 206 I ++ L+ +R ++V + + ++ + H P Sbjct: 133 VSIFQKMQALYGEER-STFASFVPVVDVNIPQIRIFRTALLRLHDNLQQHGD--HNPLSF 189 Query: 207 KVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQL 266 ++ + L+ + L + Q R+L A +Y+ N++ P+TV ++ Sbjct: 190 PIVEELLVFHL---LSCWPTTAAVRPTADQVNNRVLRNALDYIEANLASPITVSEIAFAA 246 Query: 267 HVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQF 326 VS R+LQ AF GI P ++ RL+ V L ++ + A WGF H F Sbjct: 247 GVSVRSLQIAFRESKGITPVQYIIECRLDRVHDALKRGFAPGY-ISQIANAWGFQHHADF 305 Query: 327 ATDYQQLFSEKPSLTLHQ 344 + Y++ F E P T + Sbjct: 306 SRRYRKRFGETPKQTRTR 323 >UniRef50_A7ICV7 Helix-turn-helix-domain containing protein AraC type n=2 Tax=Rhizobiales RepID=A7ICV7_XANP2 Length = 326 Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 57/322 (17%), Positives = 111/322 (34%), Gaps = 8/322 (2%) Query: 29 VDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQS 88 + + + + + QL I+ + S Sbjct: 6 ASQWSVLRLSGIENLSEAVHGAGLNAVQLSATPVTASLAFTERRSIRFTTGIIDNQVSLS 65 Query: 89 CLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDV 148 + + G+ + S + G E + + LS DV Sbjct: 66 GPLSEDMITLGLGIDLPPGTRHWLNDVTSGNVGVFMPGDEHDALYAPGSLYAVLSLSGDV 125 Query: 149 ITRQANFLHNPDRVLHMLRNQ-SALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRK 207 + +A + + + A + Q A + + PA Sbjct: 126 LEEEAAQRELVLTPKELGGSGIHGQRLAASQLALIKNLFQSIHAPLGDGAVSRMDPAA-- 183 Query: 208 VLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLH 267 L A+ + P + + + + R++ RAR ++ EN+ P++V + Sbjct: 184 ----YFLNALVEHV-GRPPRASIGVLDPRGHERIVRRARAFIHENLGSPLSVERIATAAA 238 Query: 268 VSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFA 327 S RTL AF +L P +++ ++RL+ +R ++IS ++ T+ A WG LG+ + Sbjct: 239 TSPRTLHRAFQMLLDETPYSYVLKLRLHRIRYDVISDTERTTTLATIANHWGISELGRLS 298 Query: 328 TDYQQLFSEKPSLTLHQRMREW 349 Y++LF E PS T + RE Sbjct: 299 GWYRELFGELPSQTRRRLAREG 320 >UniRef50_C3X9E6 Transcriptional regulator n=2 Tax=Proteobacteria RepID=C3X9E6_OXAFO Length = 304 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 50/290 (17%), Positives = 110/290 (37%), Gaps = 31/290 (10%) Query: 68 EILLDDIQVFREYTGLALRQSCLVWPNSFW---FGIPATRGEQGFIGSQCLGSAEIATRP 124 + ++ +FR + C N F+ G+ + +IGS+ E Sbjct: 31 QTPVNGFFLFR-------KNECECPENCFYEPAVGVIIQGQKHSYIGSREYRYGEGYCLV 83 Query: 125 GGTEF-------ELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQ 177 G + + + + + +G+ L + + T+ A + P + + + Sbjct: 84 NGIDLPAKNTILDATPDNPFLGMGIRLDKSLTTQLAAEIPPPPKTGN----------EPD 133 Query: 178 HKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESI-SHQ 236 +L L F + L +P V+ +L + L ++ + Sbjct: 134 CGLSLTRTDPDILDAFARLLDLLEKPEQIPVMAPMILREIHYRLLIGPQGSFLRTVNTFG 193 Query: 237 SYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNA 296 + +++A ++ N EPV V +L +++++ T F + + P + KR+RL Sbjct: 194 TQGNQVAQAISWLRNNYKEPVQVDELAKKVNMATSTFHRHFKQLTSLSPLQFQKRLRLYE 253 Query: 297 VRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 +R ++ + A M G+ QF +Y++LF E PS +++ Sbjct: 254 AQRLMLVENEYAAN---ACMAVGYESPTQFNREYKRLFGEPPSRNINKVR 300 >UniRef50_A6EWL3 Helix-turn-helix, AraC type:Arac protein, arabinose-binding/dimerization n=1 Tax=Marinobacter algicola DG893 RepID=A6EWL3_9ALTE Length = 341 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 96/281 (34%), Gaps = 12/281 (4%) Query: 65 EFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCL--GSAEIAT 122 + + + + G ++ ++F I + + + + Sbjct: 47 RLSFTEISGLGLSSISYGGEVKIKSPELEDAFHLQIITEGECKITFKDEKVLLKKGDAII 106 Query: 123 RPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAAL 182 L D L + + E + + + L V +L Sbjct: 107 LNPHELIILDYSHDCEKLIINVPESEFQS--AVIGDLGHIPKSGIRFKRLPVSLFCFPSL 164 Query: 183 WGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLL 242 + +L V + ++ + + + +H + Sbjct: 165 VKLFESVFLEVENFDSDLF--CVFDPYKEIMVKKILRTFQGNFNIYEKSVNAHPC----M 218 Query: 243 SRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELI 302 + +Y+ N+ +++ +LC VS R++ N F A P +++K +L VR EL+ Sbjct: 219 EKITQYIDNNLKNDISLDELCFISKVSVRSIYNMFSASFSTTPRSYIKNRKLQKVREELL 278 Query: 303 SPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 ++ V + A +GF HLG+ + DY++LF E PS T Sbjct: 279 --GGRAKNVTEVAFDYGFMHLGRLSCDYKKLFGELPSETRR 317 >UniRef50_Q8RL38 Putative uncharacterized protein n=2 Tax=Burkholderiales RepID=Q8RL38_DELAC Length = 343 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 58/318 (18%), Positives = 100/318 (31%), Gaps = 31/318 (9%) Query: 40 VYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFG 99 +E A W+ G ++ + +++F + G + V Sbjct: 36 AHELADHDLRWR-------RGAVDTGMYKVGVHALEMFMLHYGAEVEVRPRVPEGFALVH 88 Query: 100 IPATRGEQGFIGSQ--CLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLH 157 + Q + E+A F + L + + + ++ Sbjct: 89 LSLKGAIDIISDEQRITVSPGEVAYLAPRKNFRMLWQRGAQQLILKVPDTLLRSIVAEAG 148 Query: 158 NPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAM 217 L S + + F+Q L E N+ + Sbjct: 149 ------ACLDLPSTMRLTPAAARQWHLFMQSLLNIGTAPNELRLDEGWVDHFEKNIAFFL 202 Query: 218 GAMLEEAQPMVTAESISHQS--------------YRRLLSRAREYVLENMSEPVTVLDLC 263 + Q + + L Y+ ++ PV V+DL Sbjct: 203 LSQRPSQQRPRDGVATASPPVLIRSSSCTGGTSSALERLEAMERYIRRHLCAPVGVIDLA 262 Query: 264 NQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHL 323 VS RTL P L+ IRL+A R L+ +QS++V AA +GF HL Sbjct: 263 RAAGVSVRTLNIICREYRRETPMQVLRNIRLDAARSALL--LNQSVSVTQAAFDYGFGHL 320 Query: 324 GQFATDYQQLFSEKPSLT 341 G+F+ Y++ F E PSLT Sbjct: 321 GRFSAYYKERFGELPSLT 338 >UniRef50_D0I5P8 Transcriptional regulator AraC family n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I5P8_VIBHO Length = 293 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 33/281 (11%), Positives = 96/281 (34%), Gaps = 20/281 (7%) Query: 68 EILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGT 127 + + ++++ + + +V S F + A + + + Sbjct: 20 QTDIPGLKLYASQS--PIVLMPIVLQPSICFVLQAKKRVATGQQAYVYSADSYLINSVTR 77 Query: 128 EFELST-----PDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAAL 182 E S Y + + + ++ + + + ++ QS + Sbjct: 78 PVEASLLDVTDSHPYVGFSLNIDQQMVGQLMMEMTRWQKEMYSAP-QSGFTQSAPITPEI 136 Query: 183 WGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAES-ISHQSYRRL 241 + L + + +++L ++ + + + + +S+ + Sbjct: 137 SNIASRLLGLLNDEMD-------KEILAPSICRELYYAVLKGPGGGLLRNCVSNHTGANR 189 Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 ++ Y+ +N +T+ ++ + +S TL + F + + P ++K +RL+ R L Sbjct: 190 IAPVVHYIEQNFERNLTIEEIASVAGMSASTLHDHFKQVTTVSPMQYVKSLRLHKARSML 249 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 S V + G+ QF+ ++++ F PS Sbjct: 250 ----SVGYQVAEVCYGVGYSSPSQFSREFKRYFGVTPSEAR 286 >UniRef50_B5ZVG3 Transcriptional regulator, AraC family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B5ZVG3_RHILW Length = 322 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 93/264 (35%), Gaps = 5/264 (1%) Query: 83 LALRQSCLVWPNSFWFGIPATRGEQGFIG-SQCLGSAEIATRPGGTEFELSTPDDYTILG 141 Q L + +F S +G + L G Sbjct: 62 HRSLQVGLEIDDYLFFTDHGNGHSIATGSISFDVGHSRGLLTSADRYSGLEIGAGSIAEG 121 Query: 142 VVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLH 201 + +D++ R + ++ L ++ C + + Sbjct: 122 FSVPKDLVHRAVADSLECFVPSG-FEFCPSFDLATGPAVQLMNLMRFFRTEIC--GQLVV 178 Query: 202 QPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLD 261 P + M ++ + + + L RA E+ N + P+T+ D Sbjct: 179 SPIALAGFQEMFCSLMAQNMQHSLSQKLVSARVNSITPGQLRRAMEFARANAALPITIAD 238 Query: 262 LCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFW 321 + + VS RTLQ F + L P ++L+++R RR+LI + TV A QWGF Sbjct: 239 MASVAGVSVRTLQANFRSFLNTTPTSFLRQLRFEGARRDLIHAAPTA-TVTHIARQWGFV 297 Query: 322 HLGQFATDYQQLFSEKPSLTLHQR 345 H+G+F+ +Y+ F PS L +R Sbjct: 298 HMGRFSAEYRSHFGVSPSADLGRR 321 >UniRef50_B2HDE9 Transcriptional regulatory protein n=1 Tax=Mycobacterium marinum M RepID=B2HDE9_MYCMM Length = 356 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 98/336 (29%), Gaps = 29/336 (8%) Query: 23 LTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQL-----HPGKFHGEFTEILLDDIQVF 77 + P A Q + L G F G+ L +Q+ Sbjct: 23 VNPSRPGQRCAATSARRNERFEAFQHAISQTFVPLALCVDDVGTFRGQVRSASLGTVQLS 82 Query: 78 REYTGLALRQSCLVW------PNSFWFGIPATRGEQGFIGSQ--CLGSAEIATRPGGTEF 129 G + P+ +P L + A + Sbjct: 83 DVRVGNDVLVRRTAKLINHSAPDYLKVAMPLNGKCVVTQDGHEETLAPRDFAVYDTTRPY 142 Query: 130 ELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQA 189 L+ Y L ++ D + + L L ++ A + F+ + Sbjct: 143 SLAFSGAYRALVIMFPRDQVRLSSAELTR--------LTARRLNGRDGLGAPVSAFLAEM 194 Query: 190 LATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYV 249 + A L D +L + A T + + + L R R ++ Sbjct: 195 GNRLDDA-----NTAGTLYLADAVLDMLAASFAAQLSDETGGNAARGTRGLAL-RIRAFI 248 Query: 250 LENMSEP-VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQS 308 + +P + V + HVS R LQ F + G W++ R+ RR+L Sbjct: 249 ESRLGDPGLDVSTIAAAHHVSVRYLQKLFESQ-GQTVTGWIRDRRIEHCRRDLEDHRLAE 307 Query: 309 MTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 + V A +WG + F+ ++ + P+ Q Sbjct: 308 VPVSSIAARWGLVNASHFSRLFKAVHGSSPAEYRAQ 343 >UniRef50_A9I2R8 AraC-type transcriptional regulator n=3 Tax=Burkholderiales RepID=A9I2R8_BORPD Length = 336 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 48/294 (16%), Positives = 98/294 (33%), Gaps = 11/294 (3%) Query: 56 QLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFI--GSQ 113 Q+ F E +L V R G + + + + + + Sbjct: 48 QIAGSSFDFEHRCAILPHFSVHRIRYGAPVLMDIPGLRDKYILQVLLSGRSDTIYKNSNV 107 Query: 114 CLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALE 173 + S + G F D L + + A + Sbjct: 108 VMESGMVTALNVGEPFTKVLSQDAEQLLFCFNACQVNAIAASTLSDFAGNLRFFPSP--- 164 Query: 174 VKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESI 233 ++ L+ + + L + + D ++ M L ++ Sbjct: 165 LRIDKAPMLFDLINAVCTAIESHDPVLASSRTSERMADLMVDLMIRYLPAESGRRCLGAV 224 Query: 234 SHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIR 293 + +A ++ EN E +T+ ++ + V++R L F P A+L+ R Sbjct: 225 -----PFHVQKAEAFMRENFREAITLAEVASAAGVTKRCLCINFRRFRNTSPMAYLRLHR 279 Query: 294 LNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 L R+ L S +++ +V + A + HLG+F+ +Y+ F E PS T+ + R Sbjct: 280 LTQARKMLESTQARA-SVTEVAGECALHHLGRFSQEYRLEFGELPSQTIERVNR 332 >UniRef50_Q0KJU2 Positive transcriptional regulator for anthranilate dioxygenase genes n=1 Tax=Sphingomonas sp. KA1 RepID=Q0KJU2_9SPHN Length = 318 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 102/313 (32%), Gaps = 21/313 (6%) Query: 32 VHQRQTTDVYEHALTITAWQQ--IYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSC 89 +++DV E I+ Q L+ GK G + L I + G Sbjct: 10 WRLFESSDVDETREKISRVLQPHRLAPLNRGKHQGSMNYVSLGSIGIGTIRFGEMAIDLD 69 Query: 90 LVWPNSFWFGIPATRGEQGFIGSQCLGSA--EIATRPGGTEFELSTPDDYTILGVVLSED 147 V F + + I + + ++ + GT D L + + + Sbjct: 70 EV-EGYHLFIFCLSGKAELNIHRETMDASGTQGVYVAPGTPLRGRFSHDCEQLVLRVDKR 128 Query: 148 VITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRK 207 +T ++ ++ +++K + + + + + Sbjct: 129 ALT--------AANEGNLPHFRTRIDMKAPLSSPWASILNSLIGDDSAIGMVQGDERIAR 180 Query: 208 VLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLH 267 + + +A ++ E+ + P+T+ D+ Sbjct: 181 NYERL------LLSLLLAGEQDGAPARASIAPAAVRKAEAFMREHFALPITLGDIATAAG 234 Query: 268 VSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFA 327 V RTL + F P L+R R++ R L + +V DAA+ G HLG+F+ Sbjct: 235 VPARTLLDNFRKFRDESPMKALRRYRMDHARMLLETGECS--SVTDAALASGVSHLGRFS 292 Query: 328 TDYQQLFSEKPSL 340 D+++ F PS Sbjct: 293 RDFREQFGRLPSE 305 >UniRef50_UPI0001B5656E AraC family transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B5656E Length = 326 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 44/325 (13%), Positives = 95/325 (29%), Gaps = 7/325 (2%) Query: 25 PKVEVDNVHQRQTTDVYEHALTITAWQQIYDQL---HPGKFHGEFTEILLDDIQVFREYT 81 P + ++ D+ + + ++ + + + L ++ V Sbjct: 4 PFTLLRRHEVFRSGDLDQVREQVARLFCPHELVLYGRGARLNAFVRSKRLRNVAVNVIAY 63 Query: 82 GLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLG--SAEIATRPGGTEFELSTPDDYTI 139 G + + F +P + G++ + + D Sbjct: 64 GGEVLIDPGRLDDFFVVMMPLSGKAHIRSGTEEIDSYPGLATIPHPDRPLRMRWTADCAQ 123 Query: 140 LGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPEN 199 L + + + + L + +++ A+ Sbjct: 124 LIIRIDRVALEARLRDGLGYPLNDGSLSFRLGMDLTAGLTASWRRMSLMFARELDHEENL 183 Query: 200 LHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTV 259 + + + D L+ ++ + + ++ A + ++ E +V Sbjct: 184 VDRADLVGSWEDALMASLLQAQQHNYSPAMCTKALPAARPE-VNSAIRLIKDSPEEDWSV 242 Query: 260 LDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWG 319 L L + R LQ I G L+ RL V L + + TV Q G Sbjct: 243 TRLARVLDIGPRKLQQGLQEI-GTTFTQELRMARLQRVHDALHAAAPGTTTVSKVFAQNG 301 Query: 320 FWHLGQFATDYQQLFSEKPSLTLHQ 344 H G A Y+ LF E+PS TL + Sbjct: 302 IKHHGHGAGQYRDLFGERPSDTLRR 326 >UniRef50_B4EDN0 AraC family regulatory protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4EDN0_BURCJ Length = 363 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 46/283 (16%), Positives = 84/283 (29%), Gaps = 6/283 (2%) Query: 66 FTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLG--SAEIATR 123 I + G + G G Sbjct: 79 LHGAACGAIAISTLTFGRDIEIEPDDLGACLLVTTTTNGRAGITAGHAHYGGGPGTTVLS 138 Query: 124 PGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALW 183 +L V L ++ + LR +A+ W Sbjct: 139 VASDRPRFHYDPATEVLKVQLDHRRVSAACWRMM-RHPGRAPLRFDAAMRDSHALTR--W 195 Query: 184 GFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLS 243 + + T + + + + + L + + S + L Sbjct: 196 FMLLDFVMTTLNESDAALREYLAPSIEEMLTVTLLDTQPHNY-TAELHRSSGVIAPKQLR 254 Query: 244 RAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELIS 303 RA E++ + + +T+ ++ S R+L AF A P L +RL VR EL+S Sbjct: 255 RAVEFMEARLGQALTLAEIAEAADCSIRSLSRAFSAFRQTTPMQHLNHLRLEKVRSELLS 314 Query: 304 PWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 + T+ A+++GF HL F Y++ + E PS T + Sbjct: 315 DADAATTISTIALRYGFGHLSAFNQQYRRRYGETPSQTRKRAR 357 >UniRef50_Q2SF73 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF73_HAHCH Length = 320 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 104/305 (34%), Gaps = 21/305 (6%) Query: 39 DVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWF 98 D + L + Q Q+ L ++ FR + +V+ + Sbjct: 25 DAHNKGLFVDLLNQHAKQVG-------VNHTPLPEVTTFRVVKPSP--RQPVVYEPA--I 73 Query: 99 GIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVI--TRQANFL 156 I G++G++G Q + P + I ++ + L Sbjct: 74 VIVGQGGKRGYVGEQTYTYDAYNYL----VLSVPLPFECEIYEASPESPLLGLRILVDTL 129 Query: 157 HNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMA 216 D ++ M S + + L PA K+LG +L Sbjct: 130 ALNDLLIDMGDPPSRTSGDIPKSIYSTPLNDTLIEACIRLVKVLSDPAEAKILGPQILRE 189 Query: 217 MGAMLEEAQPMVTAESIS-HQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQN 275 + + T + + H S +++ + + + +P+ + + ++S TL + Sbjct: 190 IYYRVLCGDRGETLRAAANHNSRVAQIAKVLKMIHQQYDQPLDIDTMARAANMSHSTLHH 249 Query: 276 AFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFS 335 F A+ P +LK IRL+ R L + AAM+ G+ QF+ ++++LF Sbjct: 250 NFKAVTDCSPLQYLKSIRLHQARNLLAR---GGINASTAAMKVGYVSPSQFSREFKRLFG 306 Query: 336 EKPSL 340 P Sbjct: 307 APPRD 311 >UniRef50_A5EL73 Transcriptional regulator, AraC family n=2 Tax=Bradyrhizobium RepID=A5EL73_BRASB Length = 349 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 63/334 (18%), Positives = 110/334 (32%), Gaps = 8/334 (2%) Query: 16 PLPENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQ 75 P P L P + + + + D +F I LD I Sbjct: 21 PAPGTFGLEPLHRHALIRTSNAELLRDLGSRLLGAD-RIDFRSANRFEAVVNLIELDSIG 79 Query: 76 VFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQC--LGSAEIATRPGGTEFELST 133 + T + + I T + + +IA P G ++++ Sbjct: 80 LAFGATSCDMVSDHRA-ADFIRVQIAMTGRAVSCARGEATDVTDQQIAVAPAGVPWQMAC 138 Query: 134 PDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATF 193 + L + L + ++ L + ++ L + L T Sbjct: 139 QGGHRRLTLRLEPQALRQRLAALVGVQPRADYAIGSAIPANDPHARSLLR--LLDFLGTQ 196 Query: 194 CENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENM 253 + AV + L + + +A + L+ R +Y+ N Sbjct: 197 LNEQDAAFPAAVYRELEEAVQVAFLCASRHRFRDALIDPAPMP-DFGLVKRLEDYIEANW 255 Query: 254 SEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKD 313 EP+T+ L + VS R++ F + G P A+ K +RL L S S+TV Sbjct: 256 REPITIERLVREAGVSARSIFRVFERVRGYSPIAFAKSVRLRRAHEMLRSGDP-SVTVAA 314 Query: 314 AAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 AA F + G FA Y+ F E PS+T+ + R Sbjct: 315 AAAACNFANPGHFARYYRATFGELPSVTMARAER 348 >UniRef50_Q1QJ52 Transcriptional regulator, AraC family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QJ52_NITHX Length = 367 Score = 157 bits (396), Expect = 7e-37, Method: Composition-based stats. Identities = 68/306 (22%), Positives = 112/306 (36%), Gaps = 7/306 (2%) Query: 45 LTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATR 104 + QL GK G + + + + + L +R G+ + Sbjct: 20 QAVQGSHIDVMQLGHGKMRGTLSHVGIGEFSLSVGSFNLGVRTQRTSSDEKLIVGMLLSA 79 Query: 105 GEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLS-EDVITRQANFLHNPDRVL 163 ++ + + A++ P E + + + DV++ A D Sbjct: 80 KDRVTHFAFDMRPADVLVIPPAIEHDGIFHGASSYAALRFDLSDVVSMFAGEARLSDPAT 139 Query: 164 HMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEE 223 +N+ Q A + LA + ++ + D + Sbjct: 140 WYEKNRYRANQSAQTATARLPQIVSRLAQHQDALTEASADFWKRAIVDCFTATIF----- 194 Query: 224 AQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGI 283 Q + E+ + S RL+ +Y+ + PV V +LC VSRR L AFH + G+ Sbjct: 195 -QSLPPDETRTLPSALRLVHNVEDYLAAADARPVHVSELCAAFRVSRRGLHRAFHDVFGV 253 Query: 284 GPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 GP +L+ RL A+ LI TV A+Q GF LG+F+ Y LF E PS TL Sbjct: 254 GPVTFLRHKRLCAIHSALIDSSPGDTTVAKVALQQGFVELGRFSHYYHALFGEYPSETLE 313 Query: 344 QRMREW 349 R E Sbjct: 314 LRGAES 319 >UniRef50_B4E7T1 AraC family regulatory protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4E7T1_BURCJ Length = 317 Score = 157 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 53/298 (17%), Positives = 110/298 (36%), Gaps = 30/298 (10%) Query: 58 HPGKFHGEFTEILLDDIQVFR--------EYTGLALRQSCLVWPNSFWFGIPATRGEQGF 109 F G + L + V T +RQ + F + + Sbjct: 38 SGRPFTGHIDQGSLAYVDVAVVNSRAQEVHRTSRLVRQE---DADLFLISVQVAGRGELE 94 Query: 110 IGSQ--CLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLR 167 + L + + + + LS DD+ L + + D + + + Sbjct: 95 QDGRQAVLSAGDCSLYDTTRPYHLSFRDDFEQLVLSIPRDRLR------------IRIPA 142 Query: 168 NQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPM 227 + + L + + N E++ VR+ + +++L + L Sbjct: 143 ADRLTAIPIRGVNGLGSLFFDLVTSIPRNLESM-TAQVRESVSNSVLDLVATALAGLPSP 201 Query: 228 VTAESISHQSYRRLLSRAREYVLENMSE-PVTVLDLCNQLHVSRRTLQNAFHAILGIGPN 286 + A + + + L+R + YV+EN+S+ + + + L +S +L AF A G + Sbjct: 202 IPAPASN--LKQFHLNRIKSYVIENLSDAELDIARIAQTLGMSVSSLYRAF-ASEGCPLS 258 Query: 287 AWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 W+ RL+A R+ L+ +++ K AM WGF F+ +++ F E P+ + Sbjct: 259 QWIWDQRLHACRKALLDESCANLSAKQIAMSWGFNDPAHFSRAFRRKFGESPNALRTR 316 >UniRef50_Q0S6X8 Transcriptional regulator, AraC family protein n=3 Tax=Rhodococcus RepID=Q0S6X8_RHOSR Length = 335 Score = 157 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 52/286 (18%), Positives = 101/286 (35%), Gaps = 10/286 (3%) Query: 63 HGEFTEILLDDIQVFREYTGLALRQ-SCLVWPNSFWFGIPATRGEQGFIGSQCLG---SA 118 + DI V R G+ + + + + + Sbjct: 49 RSSMYSTKIGDITVTRFSYGIPVSVGDFSSDAGNALVLTTIRGNARHHLDHDATADTPAG 108 Query: 119 EIATRPGGT-EFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQ 177 + ++ + D+ L + + ++ A D + + + + Sbjct: 109 DTFVADCSRVDYLVEFSPDHVQLNLTVPHTLLADTAVRWWGFDPGGLLWQRKCVIG---G 165 Query: 178 HKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQS 237 + + A+ T E P + + + L + L+ + A+ V + + + Sbjct: 166 GGSGWQALLGYAMRTTGELPGHATEGRIGLNLQELLVGHLLTE-WAARAGVDPDRSTGPA 224 Query: 238 YRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAV 297 + A +Y+ E E T D+ + + VS RTL AF L P +++ RL + Sbjct: 225 APGYVRHAVQYIREYARELPTASDIADAVGVSVRTLSGAFRKYLDTTPAEYVREQRLQGI 284 Query: 298 RRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 R EL++ TV A WG+ +LG FA Y++ F E PS T Sbjct: 285 REELLTASPGE-TVASIAGAWGYVNLGLFAAAYRRRFGENPSQTRA 329 >UniRef50_A5V5G7 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V5G7_SPHWW Length = 334 Score = 157 bits (396), Expect = 9e-37, Method: Composition-based stats. Identities = 66/335 (19%), Positives = 110/335 (32%), Gaps = 21/335 (6%) Query: 14 HEPLPENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGE---FTEIL 70 H PL P N ++ DV I+ Q + G++ G Sbjct: 18 HHPLA---GFAPTTLRSN-RVFESNDVEYTRDQISIILQPHLLSPKGRWQGTQCYVDHFP 73 Query: 71 LDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFE 130 + + + + G + + + +G + G E Sbjct: 74 IGRVGLGTIHFGNMQVHVPSYAHYLVALCLRGSATIRADRKEYSIGGSSAHIMIPGEEML 133 Query: 131 LSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQAL 190 + D V +S + + F H L Q L++ V Sbjct: 134 GTFSSDCEQFFVRISTEAVRAHTGFRH--------LVFQKELDLTSPAVMPWLQQV---- 181 Query: 191 ATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVL 250 A NP + +L + + +L Q Q + RA Y+ Sbjct: 182 ALIAANPRMAQMISNHPLLSSDYERLLLNLLLAGQSHCERNDAPGQIAPASVRRAEAYIH 241 Query: 251 ENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMT 310 N P+++ D+ V RTL ++F P +LK +RL+ R L + T Sbjct: 242 ANAGAPISLSDIAVAAGVPARTLLDSFKHFRQTSPIRYLKDVRLDNARERLRHRGAD--T 299 Query: 311 VKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 + + A++ GF HLG+FA DY + F E PS T R Sbjct: 300 IAEVALEAGFAHLGRFAADYFKRFGELPSDTQRSR 334 >UniRef50_Q0IBZ7 Possible AraC-type regulatory protein, putative n=1 Tax=Synechococcus sp. CC9311 RepID=Q0IBZ7_SYNS3 Length = 338 Score = 157 bits (396), Expect = 9e-37, Method: Composition-based stats. Identities = 61/335 (18%), Positives = 109/335 (32%), Gaps = 23/335 (6%) Query: 25 PKVEVDNVH-QRQTTDVYEHALTITAWQQIYD--QLHPGKFHGEFTEILLDDIQVFREYT 81 P V E A + +++D QL G G F+ + L D+ + T Sbjct: 15 PSATSARVSWSTNFNSASELAAALLRLGKVFDVLQLSSGPLEGHFSVVHLKDLSILSIQT 74 Query: 82 GLALRQSCLVWPNSFWFGIPATRG-EQGFIGSQCLGSAEIATRPGG-TEFELSTPDDYTI 139 L + + F + + + I Q + + TE T Sbjct: 75 NQLLLLNGERGNDCICFSLEISGNFDDHRIFCQAIEPFSLHGFKPDLTESHFQLTAGSTS 134 Query: 140 LGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPEN 199 L + S + + +L L ++L++ + Sbjct: 135 LIAIASAKKFSGFLAHCGQLE-LLETLYTSNSLKLPPNLYTKIVQQFAWHF--------- 184 Query: 200 LHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISH---QSYRRLLSRAREYVLENMSEP 256 P + L + ++ E ++ ++L+ + EN ++P Sbjct: 185 -KNPLINLELRSLHTCHIFTLMLEVFKGTKSQCFKLFEIAPRQQLIHEFINWGFENSTKP 243 Query: 257 VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSM----TVK 312 + + D+ + L SRRTL +GP L+ IRL V L S ++ V Sbjct: 244 LKLDDVSDILFSSRRTLIQGCKENFKMGPMEILRLIRLEQVNCVLRSIELRNSLELNKVG 303 Query: 313 DAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 D A +GF G F+ YQ + E P TL + Sbjct: 304 DVANHFGFTSRGHFSAAYQNQYGETPRQTLLNANQ 338 >UniRef50_C6RKI0 Transcriptional regulator, AraC family n=2 Tax=Acinetobacter radioresistens RepID=C6RKI0_ACIRA Length = 337 Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats. Identities = 41/286 (14%), Positives = 96/286 (33%), Gaps = 8/286 (2%) Query: 62 FHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCL--GSAE 119 + ++ + + + F + + ++ + + Sbjct: 48 LNTRLNGFSFGTSALYDLKYSAPVAITIDESSAHYLFRVTLEGECKIEHDARLIIQSAGI 107 Query: 120 IATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHK 179 + ++ + T + + LS + Q + V L + + Sbjct: 108 MTVSHPHSKNRIITSQHCRNIILKLSRQEVDTQLYKMLG-HMVAEPLLFDCGISCTTEGV 166 Query: 180 AALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYR 239 A+ + + H + + G L+ + + + Sbjct: 167 EAIIETLNYLCHA---HYNIQHWDTISESFGRYLIELILLKVPNNY-TAQLQQRGKVILP 222 Query: 240 RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRR 299 +++AR+Y+ ++ + + +L Q VS RTLQ F+ P +++ +R+ + Sbjct: 223 GYMNKARQYIARHIRNNIVLAELGKQCGVSVRTLQKGFNQYFHQTPIDYIRDLRIKLIHH 282 Query: 300 ELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 EL + TV D ++ G LG F+T Y++ + PS TL Q Sbjct: 283 ELQHSQAHE-TVTDILLRNGINSLGHFSTLYKKRYGCLPSQTLRQA 327 >UniRef50_C3JZK1 AraC family regulatory protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3JZK1_PSEFS Length = 332 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 43/296 (14%), Positives = 96/296 (32%), Gaps = 29/296 (9%) Query: 55 DQLHPGKFHGEFTEILLDDIQVFR-----EYTGLALRQSCLV--WPNSFWFGIPATRGEQ 107 D LH G F G L ++ R L ++ V P + + Sbjct: 45 DPLHNGNFQGRLEYGDLGQLRFCRMTASAHRYSRHLSKALDVVDTPRMLILQVAGVSHFE 104 Query: 108 GFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLR 167 S + ++ G F +++ + + A L Sbjct: 105 QGQQSSTVAPDDMLLVDCGKPFSVTSTQGCEHFIL-----LFQGAAGQLTQTG------- 152 Query: 168 NQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPM 227 ++ + L + ++ L+ + ++GD++ + L+ Q Sbjct: 153 -----DMHLSGRNGLGRMLMHLISDAYHQYPLLNSQS-AGLIGDSIAGLLNNALKNKQDE 206 Query: 228 VTAESISHQSYRRLLSRAREYVLENM-SEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPN 286 + H +R + Y+ ++ +++ + N S R+L AF LG + Sbjct: 207 K---QLDHDFRFFKQNRLKAYIERHLADRDLSIERIANAEQCSVRSLHRAFQDELGCSVS 263 Query: 287 AWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 ++ + RL+ +L + ++ + A WG+ F+ ++ F P L Sbjct: 264 EYIWQRRLSRCAEDLRNREQTHRSLTEIAYAWGYGSSSHFSRHFKSTFGMSPRLFR 319 >UniRef50_Q0C048 Transcriptional regulator, AraC family n=5 Tax=Alphaproteobacteria RepID=Q0C048_HYPNA Length = 307 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 39/282 (13%), Positives = 91/282 (32%), Gaps = 13/282 (4%) Query: 69 ILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTE 128 ++ + + R + + I ++ G + G Sbjct: 25 TQIESVHIVRSFEARMPMRQVYRPS----LCIALQGAKEILFGDDVFRYGAMECLAVG-- 78 Query: 129 FELSTPDDYTILGVVLSEDVITRQANF-LHNPDRVLHMLRNQSALEVKEQHKAALWGFVQ 187 L P ++ I + + VL L + Q Sbjct: 79 --LDLPASGRVVEASSDVPYIGITLDLDMAILRDVLGYLETLPVPASGSGPCLFVATADQ 136 Query: 188 QALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESIS-HQSYRRLLSRAR 246 L P +L ++ + L + +++ ++ ++R Sbjct: 137 TLADCLQRLIRLLQTPEAIPILYPAIMREICYWLLTSPNGGELRNLALPETNSDRVARVI 196 Query: 247 EYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWS 306 + N ++ + V L +S + + F A+ + P + K++RL RR +++ Sbjct: 197 HLLHANFAQTLRVEQLAETARMSASSFHHHFKALTSMTPLQYQKQLRLLEARRVMVT--- 253 Query: 307 QSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMRE 348 ++ +V +AA Q G+ QF+ +Y ++F P + R+ Sbjct: 254 EAASVAEAAYQVGYESPSQFSREYSRMFGVAPKQDVLNLQRQ 295 >UniRef50_UPI0001AF5566 helix-turn-helix domain-containing protein n=2 Tax=Actinomycetales RepID=UPI0001AF5566 Length = 338 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 60/327 (18%), Positives = 104/327 (31%), Gaps = 10/327 (3%) Query: 23 LTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKF-HGEFTEILLDDIQVFREYT 81 + ++D+ E + G+ L + + Sbjct: 15 EPARESAPRELDFDSSDLAETEDFLVRTYTKMRISGEGRMCRARIQRRCLGSLSIDELSF 74 Query: 82 GLALRQSCLVWPNSFWFGIPATRGEQGFIGS---QCLGSAEIATR-PGGTEFELSTPDDY 137 + + L + E+A P Sbjct: 75 SYDMGYDAN-PLGKILLCRVRRGRIEENFIGEPQHVLAAGELAMIGPPELPHSGRVRHAG 133 Query: 138 TILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENP 197 L + ++ R A + PDR +R V L + +P Sbjct: 134 YQL-IGFDPALLDRVAP--NAPDRAHEPVRLTGHRPVSVAAGNRLTALIDYLRDHILADP 190 Query: 198 ENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSY-RRLLSRAREYVLENMSEP 256 P V +L +A + + + S LL RA ++ EN + Sbjct: 191 SAASAPLVIDTAAAHLAVATLNAFPHSALLDPTPTDRRDSAQPVLLRRAMAFIEENAHQD 250 Query: 257 VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAM 316 + + D+ ++V+ R LQ F L P +L+R+RL+ REL+ S TVK A Sbjct: 251 IALADIAAHVYVTPRALQYMFRQRLDCTPMQYLRRVRLDRAHRELLDSSRASATVKQIAN 310 Query: 317 QWGFWHLGQFATDYQQLFSEKPSLTLH 343 +WGF H+G+FA Y++ + P TL Sbjct: 311 RWGFIHIGRFAIYYRETYGRSPHATLR 337 >UniRef50_Q46855 Uncharacterized HTH-type transcriptional regulator yqhC n=112 Tax=Bacteria RepID=YQHC_ECOLI Length = 318 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 89/256 (34%), Gaps = 11/256 (4%) Query: 98 FGIPATRGEQGFIGSQCLGSA--EIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANF 155 I + + G+I + E FE T + + + Sbjct: 70 IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSE-----VPLAGLRLNVDI 124 Query: 156 LHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLM 215 L + ++ + ++ ++ L + + +P ++LG ++ Sbjct: 125 LQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIR 184 Query: 216 AMGAMLEEAQ-PMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQ 274 + + +S Q++ L+SR + + +E ++V L + ++S Sbjct: 185 EILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFH 244 Query: 275 NAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLF 334 + F ++ P +LK RL+ R +I M AAM+ G+ QF+ ++++ F Sbjct: 245 HNFKSVTSTSPLQYLKNYRLHKARMMIIH---DGMKASAAAMRVGYESASQFSREFKRYF 301 Query: 335 SEKPSLTLHQRMREWG 350 P + G Sbjct: 302 GVTPGEDAARMRAMQG 317 >UniRef50_A2SEG7 Transcriptional regulator, AraC family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SEG7_METPP Length = 318 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 54/321 (16%), Positives = 97/321 (30%), Gaps = 34/321 (10%) Query: 42 EHALTITAWQQ----IYDQLHPG------KFHGEFTEILLDDIQVFREYTG-LALRQS-- 88 E A + W Y QL +F GE L + + R +R++ Sbjct: 11 EPAQRLAYWTDGVCDTYVQLDCDAIGDASRFEGEIAADALSTLTLSRVTASAQRVRRTPA 70 Query: 89 --CLVWPNSFWFGIPATRGEQGFIGSQ--CLGSAEIATRPGGTEFELSTPDDYTILGVVL 144 + F I + L + A +EL + ++L Sbjct: 71 KIARASEDYFLVSIQTQGCGAVVQDGRVAHLSPGDFALYDSTRPYELRFDAAFQQYVLML 130 Query: 145 SEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPA 204 + S + + + T L P Sbjct: 131 PGPTLRTALT------------DTPSLTACAVSGRRGAGHLMIGMIETLSAEIATL-APE 177 Query: 205 VRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEP-VTVLDLC 263 + D++ + A L + R + + V E + +P +TV+ + Sbjct: 178 SAAAVADSVTQILIAGLSTLPGARPPPVSRLVALHR--QQVKALVRERLRDPDLTVVRIA 235 Query: 264 NQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHL 323 +L VS TL A+ A W++ RL A RR+L + + V + A WGF Sbjct: 236 ERLGVSPSTLHRAW-AGEACSLADWIQTERLEAARRDLCAAQQRLRRVSELAYSWGFKDA 294 Query: 324 GQFATDYQQLFSEKPSLTLHQ 344 F+ +++ F P + Sbjct: 295 AHFSRAFRRRFGCSPRELRAR 315 >UniRef50_B2I1B8 AraC-type DNA-binding domain-containing protein n=5 Tax=Acinetobacter RepID=B2I1B8_ACIBC Length = 294 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 107/313 (34%), Gaps = 41/313 (13%) Query: 42 EHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSF---WF 98 E A + W + G F T + ++R T +S Sbjct: 10 ELAQLVDQWTRE-----KGTFETAIT-----GLTLYRAETLT-------KPSSSMMDASL 52 Query: 99 GIPATRGEQGFIGSQCLGSAEIATRPGG-------TEFELSTPDDYTILGVVLSEDVITR 151 + A +Q + + E S Y + + L ++ + Sbjct: 53 CMIAQGKKQVILSEETYTYDSNHFLFTAIDLPVIAQVLEASVEQPYLSIVLRLDPYLLAQ 112 Query: 152 QANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGD 211 H P + ++ + A+ V F + L P +L Sbjct: 113 IMLEAHIPFKDVNTEKKGMAVGVVNSELN----------DAFIRLIKLLDTPQDIPILSP 162 Query: 212 NLLMAMG-AMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSR 270 ++ + +L Q ++ + + +A E++ N ++P ++ +L + + +S Sbjct: 163 LIIKEIFYRLLMSPQGDRLKRIVAAGTTGHRIVKAIEWLKTNFAKPFSIEELASTMGMSA 222 Query: 271 RTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDY 330 + F I + P + KR+RL RR L++ + +MQ G+ L QF+ +Y Sbjct: 223 SSFHQHFRDITSMSPLQYQKRMRLTEARRLLMTEEYD---ISSTSMQVGYESLSQFSREY 279 Query: 331 QQLFSEKPSLTLH 343 ++ F PS+ + Sbjct: 280 KRFFGVSPSVDIK 292 >UniRef50_C0VLQ6 AraC-type DNA-binding domain-containing protein n=2 Tax=Acinetobacter RepID=C0VLQ6_9GAMM Length = 291 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 94/279 (33%), Gaps = 21/279 (7%) Query: 68 EILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGT 127 +D I + R ++ + F + ++ + E Sbjct: 22 ATAIDGITLMRVDHNTPPL--AVLQEPTLVFVLQGSKRGYIGTETYAFQQGECLIVSVSM 79 Query: 128 EFELSTPDDYTI----LGVVLSEDVI-TRQANFLHNPDRVLHMLRNQSALEVKEQHKAAL 182 F+ T + + + L D + A D+ + S ++ E L Sbjct: 80 PFDCDTVASPELPMIAMIMKLEADTVNELLAKTYLENDKFKPLTTGMSVIQYDETISNVL 139 Query: 183 WGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLL 242 ++ +LG+ + + + + + Q R + Sbjct: 140 IRLLKTL-----------SSEQDSLILGEQIKRELLYRVIQHSGADALTGLVVQGNLRQI 188 Query: 243 SRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELI 302 + EY+ + +E +TV L Q ++S AF + P +LK RL+ ++ L Sbjct: 189 YKICEYIQHHFTEKLTVEMLAEQANMSISAFHKAFKQVTLHSPLQYLKVTRLHKAKQMLQ 248 Query: 303 SPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 + ++ +V AA G+ QF+ ++++ F P+ T Sbjct: 249 N---ENQSVAQAAYAVGYQSSSQFSREFKKQFGFSPNQT 284 >UniRef50_Q4C4B2 Helix-turn-helix, AraC type n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C4B2_CROWT Length = 241 Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 54/229 (23%), Positives = 101/229 (44%), Gaps = 3/229 (1%) Query: 113 QCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSAL 172 + TE P + +V+ + A+ L D + R+++ + Sbjct: 13 HPVKPQSNVFGFNNTEAHEIFPQGGALTQIVIPIETFDTYADQLQRHD-IDDDFRSKNHV 71 Query: 173 EVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAES 232 + + +++Q LA NP L QP + +++ D+ + + + + + Sbjct: 72 NLLPTGMKEIKDYLKQILALAIYNPTWLQQPHIEQLISDDFVPLLISQIPIKL--NSKSF 129 Query: 233 ISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRI 292 + +L+ +A + +L ++ +P+T+ L L S L F + G+ P ++K Sbjct: 130 VKPSRRAKLIIQAEKQILNSLEKPLTLKQLAENLGSSSSALSYGFKDLFGMSPMRYIKVR 189 Query: 293 RLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 RLNAVR+ L + +T+ A Q+GFW LG F DYQ +F E PS T Sbjct: 190 RLNAVRQHLKVRDRKRITIARVANQFGFWSLGHFIRDYQAMFGELPSQT 238 >UniRef50_A9U6Q0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6Q0_PHYPA Length = 263 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 85/252 (33%), Gaps = 13/252 (5%) Query: 97 WFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFL 156 I A + +G++ +S + + S + Sbjct: 11 SLCIVAQGEKIIILGNESYKYG------VSDYLAVSLDVPISGQVIKPSPEAPFLSIRLD 64 Query: 157 HNPDRVLHMLRNQSALEVKEQHKAA---LWGFVQQALATFCENPENLHQPAVRKVLGDNL 213 + + +++ +H + L L P L + Sbjct: 65 LDAGEIFEIMKETHLFPESIEHYPKSLFVGKMNINLLDAVIRLVRLLDTPKDILALAPLI 124 Query: 214 LMAMG-AMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRT 272 + + +L E + V + + S+ ++ E + N +P+ + +L ++S + Sbjct: 125 IKEIIYRLLTEKEGDVFKQIATSGSHFATIAEVVERIKTNFDKPLRINELAQIANMSTSS 184 Query: 273 LQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQ 332 L F + + P + K++RL RR LI+ V D A G+ QF+ +Y + Sbjct: 185 LYRHFKQVTAMTPVQYQKQLRLQEGRRLLIT---DKYNVADVAFHVGYESPSQFSREYAR 241 Query: 333 LFSEKPSLTLHQ 344 LF P+ + + Sbjct: 242 LFGCPPTTDILR 253 >UniRef50_B1Z4N2 Transcriptional regulator, AraC family n=6 Tax=Burkholderia cepacia complex RepID=B1Z4N2_BURA4 Length = 352 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 39/297 (13%), Positives = 95/297 (31%), Gaps = 25/297 (8%) Query: 62 FHGEFTE-----ILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGS--QC 114 F G + + + DI + Q+ + + ++ + + Sbjct: 72 FFGRVRQRKCDKLRISDIHASEQAVTRRFHQARSEYEDKYFAVLMLEGSQSVEQDGKIVT 131 Query: 115 LGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEV 174 L + A L + + V + + + + + Sbjct: 132 LRPGDFAVYDATRPHHLQFGQSWREIVVSIPRTTLNQLVVGM------------EHRTAC 179 Query: 175 KEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESIS 234 + ++ L ++ + + + L D + + + Q A+S Sbjct: 180 PMPTGQGVGCVMRGFLEQMSSQIRHVSEDEMLQ-LSDTAISLIAMTIGSLQRNDVAQSRM 238 Query: 235 HQSYRRLLSRAREYVLENMSEP-VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIR 293 L+R + ++LE++ +P + + +S R + F A ++ +R Sbjct: 239 KALT---LTRVKRHLLEHLRDPELNPTMVEQATGISSRYINKLFEAE-NTSLMRYIWNLR 294 Query: 294 LNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 L +L +P + V D A++WGF + F+ +++ F+ P Q E Sbjct: 295 LERCAEDLANPQCGVLRVSDIALRWGFNDMSHFSRAFRERFAVAPRAWRRQGGAEAA 351 >UniRef50_A4XVM8 Transcriptional regulator, AraC family n=15 Tax=Proteobacteria RepID=A4XVM8_PSEMY Length = 315 Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 50/292 (17%), Positives = 102/292 (34%), Gaps = 25/292 (8%) Query: 66 FTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSA------- 118 + +++ R + Q+ I A ++ +G + Sbjct: 35 LHLTAIPGLKLARATSPSLPMQTVYDP----CLCIIAQGRKEIRLGDELYVYDPLNYLVA 90 Query: 119 EIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQH 178 + G E S Y L + + +I+ + A + Q Sbjct: 91 SVMLPVTGRVIEASPEAPYLSLALEIDPALISSLLTEMPPI----------PAPDAASQR 140 Query: 179 KAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMG-AMLEEAQPMVTAESISHQS 237 L + L L P +L L + ML Q E + S Sbjct: 141 ALFLDRLDPRLLDAVIRLLRLLETPRDIAMLAPLALREIFYRMLLSPQGHRLHEVVVADS 200 Query: 238 YRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAV 297 + +SRA E++ +N +P+ + +L ++++S TL + F A+ P + K++RL Sbjct: 201 QSQRISRAIEWLRKNFDQPLRIEELAREVNLSPSTLHHRFKAVTAFSPLQYQKQLRLQEA 260 Query: 298 RRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREW 349 RR ++ ++ A+ + G+ QF+ +Y +LF P + + + Sbjct: 261 RRLML---CDNLEAAAASYRVGYESPSQFSREYSRLFGAPPQRDIARLRQAA 309 >UniRef50_A6W3U9 AraC-type transcriptional regulator domain protein n=4 Tax=Proteobacteria RepID=A6W3U9_MARMS Length = 336 Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 93/292 (31%), Gaps = 27/292 (9%) Query: 66 FTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSA------- 118 T+ + + + R L + ++ IG Q + Sbjct: 48 LTQTQIPRLDILRVCQPTELFPEIYQP----LISLILQGSKRIVIGDQVVDYRAGQSFIT 103 Query: 119 EIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQH 178 + G E S Y L + L ++T + +P + +V E Sbjct: 104 SVELPVIGEVVESSPASPYLALRLSLDRALVTEILCEMDSPLSLSETRGFC-IDQVSEDL 162 Query: 179 KAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISH-QS 237 A + ++ P ++ + + + I+ Sbjct: 163 ADAWYRMIR-----------LTDHPEDIDLIAPLIEREILYRMLRGPQGAVLRQIAGIDD 211 Query: 238 YRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAV 297 + A ++ ++ + V +L +++S F A +G+ P + K+IRL Sbjct: 212 RFFQIRNAITWIRKHYATAFRVEELAATVNMSPSAFHRRFKATVGLSPLQYQKQIRLYEA 271 Query: 298 RRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREW 349 RR L + V A+ G+ L QF+ +Y +LF P+ + R+ Sbjct: 272 RRMLFTELGG---VTTVALSVGYESLSQFSREYSRLFGAPPARDIRTLRRDA 320 >UniRef50_A4THW4 Transcriptional regulator, AraC family n=17 Tax=Gammaproteobacteria RepID=A4THW4_YERPP Length = 297 Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats. Identities = 32/257 (12%), Positives = 90/257 (35%), Gaps = 19/257 (7%) Query: 97 WFGIPATRGEQGFIGSQCLGSA--EIATRPGGTEFELSTPDDYTI----LGVVLSEDVIT 150 I + G++GS+ FE T I + + + ++ Sbjct: 51 SVVIIFQGHKVGYLGSKVFQYDPKNYLILSVPLPFECETFASPEIPLAGISIQVDSQMLQ 110 Query: 151 RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLG 210 + + + ++ L + + +VLG Sbjct: 111 DLMMTMGDDELEKPPGNTSGVNSAP---------LTEEMLCATERLLDVMSIARDARVLG 161 Query: 211 DNLLMAMGAMLEEAQPMVTAESI-SHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVS 269 ++ + + +++ + + +++ + + ++ ++V L ++++S Sbjct: 162 PQIVREILYYVLCGSCGGALQALVNRHGHFNQITKTLRRIENHFADNLSVEQLAAEVNMS 221 Query: 270 RRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATD 329 + F A+ P +LK RL+ R ++ ++ T AA++ G+ QF+ + Sbjct: 222 VSAFHHNFKAVTNTSPLQYLKSYRLHRARMMMLHDGLKAST---AAIKVGYESASQFSRE 278 Query: 330 YQQLFSEKPSLTLHQRM 346 +++ F PS + ++ Sbjct: 279 FKRYFGHTPSEGVAKQR 295 >UniRef50_A8KCK0 HTH AraC-type regulator n=1 Tax=[Polyangium] brachysporum RepID=A8KCK0_9BURK Length = 322 Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 88/278 (31%), Gaps = 16/278 (5%) Query: 68 EILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGT 127 + + V + T L P I A ++ + E+ Sbjct: 46 ATAIPRLSVIKLSTPSDELVHALHEP---AVCIIAQGAKRVML------RDEVYCYDTSR 96 Query: 128 EFELST--PDDYTILGVVLSEDVITRQANFLH-NPDRVLHMLRNQSALEVKEQHKAALWG 184 ST P + + + + ++ L A L Sbjct: 97 FLVFSTDLPISAQVTDATFERPYLCFRLDLDPKEVSELVLQLGAPPATRNATSRGLFLSA 156 Query: 185 FVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYR-RLLS 243 L L P L + L +++ ++ ++ Sbjct: 157 ATDAMLDAAVRLLRLLDTPEDVPALAPLATRELVYRLLKSEQGERLAQVARADSPGHRVT 216 Query: 244 RAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELIS 303 RA ++ N +EP+ V +L +S +L + F + + P + K++RL RR ++S Sbjct: 217 RAIAWLKANYAEPLKVDELARCCCMSTSSLHHHFRVLTSMSPLQYQKQLRLQEARRLMLS 276 Query: 304 PWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 + + V AA G+ QF+ +Y +L+ PS Sbjct: 277 ---EGIEVSKAAYTVGYESASQFSREYSRLYGIAPSKD 311 >UniRef50_UPI0001909603 transcriptional regulator, AraC family protein n=2 Tax=Rhizobium etli RepID=UPI0001909603 Length = 330 Score = 153 bits (388), Expect = 7e-36, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 97/264 (36%), Gaps = 11/264 (4%) Query: 87 QSCLVWPNSFWFGIPATRGEQGFIGSQCL--GSAEIATRPG-GTEFELSTPDDYTILGVV 143 ++ P + +P T G + + +++ + + Sbjct: 69 RTAHGTPETLAIVVPRTGALNVGFGRTVVEATPGRLLLMNNLESDWVSIGAAPHRSDTLS 128 Query: 144 LSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQP 203 L+ ++ + + + + ++ VQ + N LH P Sbjct: 129 LNWTILAQAVAAIFERPLI-GAMELLPVIDFSTAAGQLFGNLVQTIILGMRNNGPLLHSP 187 Query: 204 AVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLC 263 L L + ++ + I H R + RA +++ N+++P+T+ + Sbjct: 188 IAMSNLTQALADLVVRLIPNRLSHLLDNKI-HLIAPRHVRRAIDFMYANIAQPLTMQSVA 246 Query: 264 NQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQ---SMTVKDAAMQWGF 320 VS R+L+ F G P A+L+ +RL+A R +L P ++ + + + + Sbjct: 247 EAAGVSIRSLEVGFRDFKGTTPAAYLRSLRLHAAREDLRDPLNRQPFARHLPEVGNSF-- 304 Query: 321 WHLGQFATDYQQLFSEKPSLTLHQ 344 LG+F+ Y+ + E PS T + Sbjct: 305 -TLGRFSALYRAAYGENPSDTRRR 327 >UniRef50_C8Q8U1 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8Q8U1_9ENTR Length = 311 Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats. Identities = 65/326 (19%), Positives = 115/326 (35%), Gaps = 32/326 (9%) Query: 28 EVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALR- 86 DN+ R D + A+ Q H G+F G F +L + + + AL Sbjct: 6 TTDNLENRHRFDAWRDAVCSRLINAEARQTHAGEFSGSFGYSMLGHVDIANHISRTALVW 65 Query: 87 ---QSC--LVWPNSFWFGIPATRGEQGFIGSQ--CLGSAEIATRPGGTEFELSTPDDYTI 139 Q C + F+ G C+ + ++ T F+ + ++ I Sbjct: 66 QRTQECIRRHPNHDFYLGYICAGSGTLSQNDNHSCVSAGDVVIYDAATPFDFAM-ENVAI 124 Query: 140 LGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPEN 199 V L +I ++A + L++ +L + +A A E Sbjct: 125 NIVHLPRQMIEKEAPSIARLA--------GKTLDLSRPGMTSLKQMLTEAFAFNAE---- 172 Query: 200 LHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSE-PVT 258 + + + LL + L + L SR Y+ N+ E ++ Sbjct: 173 RENAFLTEQFANTLLNMIAVSL-------NLQKSDAALKPDLYSRVVSYLRLNLHEHDLS 225 Query: 259 VLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQW 318 V + N HVS RT+ F A G P ++ + RL A + L ++ V AM Sbjct: 226 VAQIANAHHVSPRTVSRVFAAH-GTTPMNFVWQERLLASHKVL--AEGKARNVTQVAMDH 282 Query: 319 GFWHLGQFATDYQQLFSEKPSLTLHQ 344 GF + F+ +++ F PS + Q Sbjct: 283 GFSDMSHFSLAFRKAFGYTPSSLIRQ 308 >UniRef50_A4CW16 Transcriptional regulator, AraC family protein n=2 Tax=Synechococcus RepID=A4CW16_SYNPV Length = 339 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 62/319 (19%), Positives = 115/319 (36%), Gaps = 16/319 (5%) Query: 34 QRQTTDVYEHALTITAWQQIYD--QLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLV 91 E A + + Y+ QL G+ G FT + I + + L + Sbjct: 26 SASFGSASELAYYLKRLGKPYEAIQLSQGRLAGRFTCANFNSITILEISSNQCLLLNGDR 85 Query: 92 WPNSFWFGIPATR-GEQGFIGSQCLGSAEIATRPGG-TEFELSTPDDYTILGVVLSEDVI 149 P+ F + ++ + + + I E + T + S + I Sbjct: 86 GPDFMSFCLESSGVADDHKTHTLAVPKYSINGFKSNLKESHFQLTANSTTYFAITSANRI 145 Query: 150 TRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVL 209 +++ ++ ++ L +QQ++ + N R+ + Sbjct: 146 NSILKH-CKAEQLKEKFLTCNSAQITPSQHNKLKTLLQQSINNTASSLSN------RQQI 198 Query: 210 GDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVS 269 G++++ L Q + + + L+ + + +E +T+ D+ QL S Sbjct: 199 GNSIISHFIDSLMSTQDINY-HPLELTQRQLLVKNFIQLGFDRGNEDLTLDDISKQLFCS 257 Query: 270 RRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQS----MTVKDAAMQWGFWHLGQ 325 RRTL +GP LK IRL V L + +++ V D A + F+ G Sbjct: 258 RRTLIQGTKDTFEMGPMELLKTIRLEQVNWMLRNKDARAEAALQNVSDIAKHFNFYSRGH 317 Query: 326 FATDYQQLFSEKPSLTLHQ 344 FA YQ LF E PS TL + Sbjct: 318 FARAYQNLFHENPSQTLQE 336 >UniRef50_C0N265 AraC-type transcriptional regulator N-terminus domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N265_9GAMM Length = 302 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 94/278 (33%), Gaps = 16/278 (5%) Query: 72 DDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAE--IATRPGGTEF 129 ++V RE + A + P I A ++ +G+ + Sbjct: 37 PGVRVLRESSQDAKPARNISQPG---MCIVAQGAKRVVLGNDIFEYDNSRMVVYSTEVPI 93 Query: 130 ELSTPDDYTILGVVLSEDVITRQANFLHNP-DRVLHMLRNQSALEVKEQHKAALWGFVQQ 188 I+ + E + + + V E + + Sbjct: 94 SA------NIIRASIDEPYLCLIIDITPQKLAELTAKAFPHGLPRVPESRAIHIGPTNPK 147 Query: 189 ALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESIS-HQSYRRLLSRARE 247 + E +P +L +L + L + I S + +S+ Sbjct: 148 IVDAGIRLLELFSEPDDVDLLIPLVLDEIFIRLLRSHIGALVAQIGITDSNLQKVSKGIS 207 Query: 248 YVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQ 307 +V E+ ++P+ V L +++S F A+ + P + K +RL+ + ++S + Sbjct: 208 WVREHYAQPMKVDQLAAHVNMSVSAFHQHFKAVTTMSPLQFQKELRLHEAKNLMLS---K 264 Query: 308 SMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 M V A++Q G+ + QF+ +Y +LF PS Sbjct: 265 MMDVSSASLQVGYASVSQFSREYSRLFGVSPSKDTRSA 302 >UniRef50_C0GAC0 AraC-family transcriptional regulator n=4 Tax=Brucella RepID=C0GAC0_9RHIZ Length = 332 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 41/299 (13%), Positives = 85/299 (28%), Gaps = 25/299 (8%) Query: 59 PGKFHGEFTEILLDDIQVFREYTG-----LALRQSCLVWPNSFWFGIPATRGEQGFIGSQ 113 +F G+ T ++ + R + F +P + Sbjct: 49 ADRFSGDLTTWEFGNVSISRLTSDALQYLRLPHHFGSSREEEFLVTVPVKAEVYFSQCGR 108 Query: 114 CLG--SAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSA 171 + + S + + + + D + + Sbjct: 109 EVRCRPGGFFLERSSEPYHFSHAEAADMWVLKVEGDALCGRMRA------------PDRF 156 Query: 172 LEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAE 231 ++ G L + + + Q R +G L+ + ++ ++T+ Sbjct: 157 CTLQFGANNGAGGLFTDMLQLLPDRFDGMTQ-EARITVGRQLVDLLVLAIKADDRVLTSG 215 Query: 232 SISHQSYRRLLSRAREYVLENMSE-PVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLK 290 + L+R Y+ N+ + + + +S R L F G W++ Sbjct: 216 --NSTVRSAHLARIEAYIRTNLQDFRLDPDRIARACGISTRYLHELFKD-TGQTVRHWIR 272 Query: 291 RIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREW 349 RL A R L P + T + A WGF QF+ ++ F P W Sbjct: 273 EQRLAACREALEDPDN-IQTAAEIAYSWGFNDQTQFSRAFKAQFGLPPGEHRENARARW 330 >UniRef50_B8HJE0 Transcriptional regulator, AraC family n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HJE0_ARTCA Length = 333 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 105/312 (33%), Gaps = 25/312 (8%) Query: 43 HALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCL-----VWPNSFW 97 + ++ +++ ++ PG F G + I+ TG L + Sbjct: 33 LSRSLMSFEVELER--PGAFQGYLRNRKVAGIEFIEMSTGKHLAHRGAESISSTDRPDYL 90 Query: 98 FGIPATRGEQGFIGSQC--LGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANF 155 + + ++ L ++ + + DY L + + +I Sbjct: 91 LCLQIAGVGEFSQDNRTAVLQPGDLTLFDTTRPTTVVSSTDYRNLCMKFPQRLINLPPEQ 150 Query: 156 LHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLM 215 L + + L T + + K+L + Sbjct: 151 LGQ------------LTATRTGARDGFAPAAGTLLITMNQLMDT--SSGRSKILAAQGAL 196 Query: 216 AMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEP-VTVLDLCNQLHVSRRTLQ 274 + + + Q ++ S + LL + R Y+ EN+S+P + + ++S R L Sbjct: 197 DIITTMFQRQLDISTPSYPQATSPALLEQIRSYIDENLSDPGLGPRTIAAAHYISLRQLH 256 Query: 275 NAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLF 334 F A G+ +W++ RL RR+L P +++ ++WGF F +++ F Sbjct: 257 GIFQAQ-GLTVASWVRHQRLQRCRRDLSDPALHAVSAASIGLRWGFKTASHFGMSFRKTF 315 Query: 335 SEKPSLTLHQRM 346 P+ + + Sbjct: 316 GLTPAEFRQEAL 327 >UniRef50_B8FM47 Transcriptional regulator, AraC family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FM47_DESAA Length = 277 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 39/277 (14%), Positives = 91/277 (32%), Gaps = 29/277 (10%) Query: 70 LLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGS--QCLGSAEIATRPGGT 127 + + V E + + F GI +G ++ G Sbjct: 22 AVHGLHVTNE-FSRHV-------HDGFSIGIVLEGKRVIDQKGASVVIGPKDVFLINPGE 73 Query: 128 EFELSTPDD-YTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFV 186 + D +T + + + + A+ + + L + Sbjct: 74 PHACKSEDGKHTYFTICVEPEALKSFASQ------ISEKAQETPYFSCLAAKDEELNSLI 127 Query: 187 QQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAR 246 ++ + ++ + + +L+ + + E + + ++RAR Sbjct: 128 REFMTLVQKSGSTMEK-------EASLISILSTAILR-YGDNPPEIRRISPHVQAVNRAR 179 Query: 247 EYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWS 306 EY+ + +E +T+ +L +S Q F +GI P+ +L + R+ R L Sbjct: 180 EYIKTHYAENLTLKELAGVACLSPFYFQRLFLENVGISPHDFLIQYRIKKAREML----D 235 Query: 307 QSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 Q ++ DAA+ GF F ++++ P + Sbjct: 236 QGSSLADAALDVGFTDQSHFTRAFKRVTGISPGRYIR 272 >UniRef50_C1BBD9 Putative AraC family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1BBD9_RHOOB Length = 336 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 63/329 (19%), Positives = 113/329 (34%), Gaps = 19/329 (5%) Query: 22 KLTPKVEVDNVHQRQTTDVYEHALTITAWQQI----YDQLHPGKF---HGEFTEILLDDI 74 L P +V ++D E I AW Y G+ + DI Sbjct: 7 SLDPLSDVAVPSAASSSDWDE----IRAWSDQVYMPYRVRASGRLLQPQSSMFSASIGDI 62 Query: 75 QVFREYTG-LALRQSCLVWPNSFWFGIPATRGEQGFIG--SQCLGSAEIATRPGGT-EFE 130 + R G + + +G +GS E Sbjct: 63 TLTRFRYGIPVTVDDISADAGNILVLTTIRGCARHRVGAAEVEVGSGGTFLVDCSRIEHY 122 Query: 131 LSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQAL 190 + L + + ++ A+ + +++ + + ++A + A+ Sbjct: 123 IEFDQSDLQLNLTVPHRLVADAADRWFGYRPDDRLWQHKCVI--GDGQQSAWNALLAYAV 180 Query: 191 ATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVL 250 + +P+ + L + LL + A A V + + RA Y+ Sbjct: 181 RSIAADPDRIAHGRPGIHLQEMLLGHLLAE-WAAAAGVALDGGRSDVAPEYVGRAEHYMR 239 Query: 251 ENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMT 310 E+ +E TV ++ + VS R L AF PN +L +RL + ELI+ + T Sbjct: 240 EHAAELPTVSEVAAAVGVSVRALSGAFRRYRETTPNRFLTEVRLQRIHDELIAATHE-CT 298 Query: 311 VKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 V A +WG+ ++G FA Y+ F E PS Sbjct: 299 VSSVAARWGYVNMGVFAAAYRGRFGENPS 327 >UniRef50_UPI00019090B3 AraC family transcriptional regulator n=1 Tax=Rhizobium etli CIAT 894 RepID=UPI00019090B3 Length = 181 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 3/179 (1%) Query: 172 LEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAE 231 + Q AA + ++ + +L P V L LL+A + + Sbjct: 4 IAPDSQASAAQFRLLEFVIGELDREDASL-PPLVLAELEQALLVAFLCSNHHNYSHLLNK 62 Query: 232 SISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKR 291 S + R EY+ +N +P+T+ L + S R+L AF G+ P ++K+ Sbjct: 63 Q-PLASAPWQVRRVEEYIRQNWDQPLTIEALALVANASVRSLFYAFKKGRGVSPMTFVKQ 121 Query: 292 IRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 +R+ + L SP + +V A GF +LG FA Y F E PS TL + R+ G Sbjct: 122 VRMRNAKAMLASPS-SATSVTSVAYACGFSNLGHFARYYYSTFGEHPSDTLRKAFRDSG 179 >UniRef50_C3PKW7 Transcription regulator, AraC family n=2 Tax=Corynebacterium RepID=C3PKW7_CORA7 Length = 306 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 95/301 (31%), Gaps = 26/301 (8%) Query: 51 QQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFG---IPATRGEQ 107 Q D P FH + DI +F T + + F + T Sbjct: 24 QLDVDAEDPSSFHATLRSTKVGDISLFDMCTSPHTVNRSKIATDETPFCKLSLQITGSST 83 Query: 108 GFIGSQC--LGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHM 165 + L ++A + L P++ L V + + + Sbjct: 84 MSQDGRTCELRPGDLALYVTQRPYTLHYPEEQNTLIVHFPQSFLDISPAQI--------- 134 Query: 166 LRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQ 225 Q L EN + L P ++ L M + + + Sbjct: 135 ---QRLTANPISRSHGLGAVAVPLFEQLAENLDLLKGPHATALVRSALTMLVSVLASDVA 191 Query: 226 PMVTAESISHQSYRRLLSRAREYVLENMSE-PVTVLDLCNQLHVSRRTLQNAFHAILGIG 284 +A ++ L ++A Y+ +++ + + + L VS R L F G+ Sbjct: 192 DEPSAGTL-------LFNQATAYIEQHLGDSDLGPSTIAQALFVSVRHLHAKFSEQ-GLS 243 Query: 285 PNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 ++++ RL +RREL+ P ++ + ++G + ++ F + PS Sbjct: 244 VGSYIRTRRLEHIRRELVDPRHSEESISHISARYGLHDPSHLSRIFKAEFHKPPSAYRAA 303 Query: 345 R 345 Sbjct: 304 A 304 >UniRef50_Q3JGA1 AraC family regulatory protein n=57 Tax=Bacteria RepID=Q3JGA1_BURP1 Length = 390 Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 51/286 (17%), Positives = 97/286 (33%), Gaps = 21/286 (7%) Query: 70 LLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEF 129 + + FR + C V +F F A ++ + Q + Sbjct: 115 AIPALSFFR--CSSPVDLGCSVTRAAFVFA--AQGAKRVTVAGQAYEYDHQQCLVTSVDL 170 Query: 130 EL-----STPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWG 184 + L V + A + + +R V + Sbjct: 171 PMLSQVTRASAGAPYLCVKI--------ALDVQRIAELSAEMRMPPPEAVPTGEGIVVGA 222 Query: 185 FVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESIS-HQSYRRLLS 243 + L PA +L + + L + I+ S ++ Sbjct: 223 LSEPLFDAALRLVRLLDTPADIPILAPLIEKELLYRLLTSGLGARLRHIAVAGSQTYRIA 282 Query: 244 RAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELIS 303 RA E++ + +EP+ V L Q+++S +L + F + + P + K++RL+ RR L+ Sbjct: 283 RAIEWLRHHYTEPLRVETLAQQVNMSVSSLHHHFKHVTTLSPLQYQKQLRLHEARRLLL- 341 Query: 304 PWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREW 349 Q V A++ G+ QF+ +Y +LF P + QR R Sbjct: 342 --GQHGDVGSVALRVGYDSPSQFSREYSRLFGAPPLRDVVQRRRNG 385 >UniRef50_C6CSL0 Transcriptional regulator, AraC family n=2 Tax=Paenibacillus sp. JDR-2 RepID=C6CSL0_PAESJ Length = 301 Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 46/294 (15%), Positives = 104/294 (35%), Gaps = 20/294 (6%) Query: 60 GKFHGE---FTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLG 116 +F G+ E + + +FR+ S V S F + Sbjct: 17 DRFAGQQNGVHETPISSLFLFRQ--NQPTEPSHGVHSRSICFVFQGKKEVSLAEERFPYS 74 Query: 117 SAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRN---QSALE 173 E + P IL + + F +P+++L +++ Q + Sbjct: 75 PDEYLVAS------VELPVISRILEASSERPYLALKLEF--SPEQILGVMKESGIQPRPQ 126 Query: 174 VKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESI 233 + + + + L QP +L L+ + + +++ V+ E + Sbjct: 127 EHARRGLFIGQMERSLTDAIHRLVQLLEQPDDIPLLAPLLIKEILYRILQSKHGVSLEQL 186 Query: 234 SHQSYRR-LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRI 292 + + + +++ +N + + +L ++S TL F + + P + K + Sbjct: 187 ALEGGGAFRIKEVIDHIKKNYEKSIRSDELAAIANMSVPTLYRHFKEVTAMSPIQFQKHL 246 Query: 293 RLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 RL A R L+S + + D A + G+ QF+ +Y ++F P + + Sbjct: 247 RLQAARSLLLS---EPVNAADVAFRVGYESPSQFSREYARMFGLSPIQDIKRLR 297 >UniRef50_D0KFC4 Transcriptional regulator, AraC family n=2 Tax=Pectobacterium RepID=D0KFC4_PECWW Length = 346 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 29/264 (10%), Positives = 91/264 (34%), Gaps = 30/264 (11%) Query: 98 FGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTI------------LGVVLS 145 I + G++G + ++ P + + + + Sbjct: 93 IVIILQGKKIGYLGGKTF------LYDPENYLLMTVPLPFECETIASVENPLVGIAISID 146 Query: 146 EDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAV 205 ++ + + D + + + L + ++ P Sbjct: 147 IPMLQDLLIDIGDDDSAIRPCSCTCGVNSAP--------LNDEILCAVERLLDTMNNPRD 198 Query: 206 RKVLGDNLLMAMGAMLEEAQPMVTAESI-SHQSYRRLLSRAREYVLENMSEPVTVLDLCN 264 +VLG ++ + + + +++ + ++ +++A + + ++ + V L Sbjct: 199 ARVLGPTIVREIIYHMLCGERGAALQALVNRHTHFSQITKALRRIKNHYADSLNVEQLAA 258 Query: 265 QLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLG 324 ++++S + F A+ P +LK RL+ R +++ ++ AA + G+ Sbjct: 259 EVNMSVSAFHHNFKAVTNTSPLQYLKSYRLHKARVMMLNDGLRA---GVAAARVGYESAS 315 Query: 325 QFATDYQQLFSEKPSLTLHQRMRE 348 QF+ ++++ F P + + Sbjct: 316 QFSREFKRYFGATPGDEVTRLKAN 339 >UniRef50_C6DIU8 Transcriptional regulator, AraC family n=3 Tax=Pectobacterium carotovorum RepID=C6DIU8_PECCP Length = 329 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 34/252 (13%), Positives = 94/252 (37%), Gaps = 14/252 (5%) Query: 98 FGIPATRGEQGFIGSQCLGSAE----IATRPGGTEFELSTPDDYTILGVVLSEDVITRQA 153 I + G++G + + T P E E ++ ++G+ + R Sbjct: 76 IVIIFQGQKIGYVGGKTFQYDPENYLLMTVPLPFECETIASAEHPLVGMAI------RID 129 Query: 154 NFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNL 213 + + + + + L + + P +VLG + Sbjct: 130 IQMLQDLLIDIGDDDSAVRPCSCTCGVNSAPLTDEILCAVERLLDAMDNPRDARVLGPTI 189 Query: 214 LMAMGAMLEEAQPMVTAESI-SHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRT 272 + + + + +++ + ++ ++++ + + ++ + V L ++++S Sbjct: 190 VREIIYHMLCGERGAALQALVNRHTHFSQIAKSLRRIENHYADNLNVEQLAAEVNMSISA 249 Query: 273 LQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQ 332 + F A+ P +LK RL+ R +I+ + + AA + G+ + QF+ ++++ Sbjct: 250 FHHNFKAVTNTSPLQYLKSYRLHKARVMMIN---EGLRAGVAAARVGYESVSQFSREFKR 306 Query: 333 LFSEKPSLTLHQ 344 F PS + Sbjct: 307 YFGATPSDEAAR 318 >UniRef50_A5VE01 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VE01_SPHWW Length = 329 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 46/283 (16%), Positives = 92/283 (32%), Gaps = 17/283 (6%) Query: 66 FTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGS--AEIATR 123 LD I R ++ + N I + G+ + ++ Sbjct: 55 IEHRDLDQISFNRVIYDERIKVESPQFRNFNTLMIIRSGEVSARHGAASFSAKAGDVVLF 114 Query: 124 PGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALW 183 G ++ + + + +I A + + + L Sbjct: 115 SGKARSIFEFSAEFEQMTLKIPTSIIDAVAGNHNFSAHLRPGVLRCDT--------NPLL 166 Query: 184 GFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLS 243 ++ A+ + + VRK + + A + + L Sbjct: 167 QAIESIYASIGQPNDIYRSRVVRKEAERLIAAMVIAA-----CGDAGQPAEASDFPPSLV 221 Query: 244 RAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELIS 303 RA ++ N+ V++ DLC +S L F LG P +L RL A ++ Sbjct: 222 RACAFIERNLGGEVSIEDLCRVASISASGLNYIFKRYLGFSPLRYLALCRLEAANEMILR 281 Query: 304 PWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 ++ + + A+ GF HL +F+ Y + F E PS T ++ + Sbjct: 282 YPARQ--ITEIALDCGFLHLSRFSGLYAKRFGELPSQTRNRAL 322 >UniRef50_A1T1B9 Transcriptional regulator, AraC family n=2 Tax=Mycobacterium RepID=A1T1B9_MYCVP Length = 331 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 90/286 (31%), Gaps = 7/286 (2%) Query: 61 KFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQC---LGS 117 + L + + + + Sbjct: 49 RASALIDRRWLGPVSYDELRLDFHMSYDA-APLGRICLCRVHEGCIEEDFIGEPQDVFVP 107 Query: 118 AEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQ 177 ++A + + + ++ R A + R +R V + Sbjct: 108 GDVALLSPPELPYSGRVCEASYDLTMFDTALLDRVA--TPDRGRSAGSVRLLGHRPVSPE 165 Query: 178 HKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQS 237 + L + + + T + V + + + + Sbjct: 166 AQLQLNSAI-ECVRTVVHSDGPAPTRLVASTTASMIAAVVLSAFPTNAASEPTALDRIDA 224 Query: 238 YRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAV 297 LL RA Y+ N + + D+ +HV+ R LQ F L + P +L+R+R++ Sbjct: 225 KPPLLRRATAYIEGNADADIALADIAGSVHVTPRALQYMFRKYLDMTPMEYLRRVRMDHA 284 Query: 298 RRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 RELI + TV+ A +WGF H G+FA Y++ + PS TL Sbjct: 285 HRELIKADAGQTTVQIVAARWGFAHTGRFAAMYREAYGRNPSDTLR 330 >UniRef50_Q140Z5 Transcriptional regulator, AraC family n=2 Tax=Burkholderiales RepID=Q140Z5_BURXL Length = 336 Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats. Identities = 49/326 (15%), Positives = 110/326 (33%), Gaps = 26/326 (7%) Query: 26 KVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLAL 85 + +V TD +E L+ + + P F+ + ++ + Sbjct: 18 EWSTSDVPLGDRTDAWESVLSTSYREWQVPHRLPATFYAHVKQHDFAGAEIVETVCDPCM 77 Query: 86 RQS--CLVWPN---SFWFGIPATRGEQGFIG--SQCLGSAEIATRPGGTEFELSTPDDYT 138 Q V + + E+ IG + S ++ G E + Sbjct: 78 GQRTAGHVRHDDELYVGVQLTTAGRERFRIGDAGVEVASGDVVVWTTGQAVEFEVLERLH 137 Query: 139 ILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPE 198 + +++ V+ + R Q K + + + + L Sbjct: 138 KVTLMIPWSVMRERL-----------PERKQPPTGGKIESRMGVGSLLAVHLLALSNEIA 186 Query: 199 NLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEP-V 257 L + +V+ + + L +G L QP T ++ +L R ++++L+++ E + Sbjct: 187 TLDE-SVQGSVNRSTLELLGIALSGQQPCATFDASV-----AMLRRVQDFILQHLHEDDL 240 Query: 258 TVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQ 317 + H+S R L F + + W+ RL+A ++ L+ P + + A + Sbjct: 241 NPTRIAEANHISLRYLHMLFQRS-DMTVSGWILDRRLHACKQALMDPAYNRQRISEIAFR 299 Query: 318 WGFWHLGQFATDYQQLFSEKPSLTLH 343 WGF F +++ + P Sbjct: 300 WGFNSTSHFCRAFREKYGASPGDVRR 325 >UniRef50_A6X646 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X646_OCHA4 Length = 318 Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 101/293 (34%), Gaps = 12/293 (4%) Query: 58 HPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGF-IGSQCLG 116 + E + + + G R + +P L Sbjct: 34 SSRTYRTEVSHGRMRPFGLTAIRIGGHARIEVEAHNDMTLLQVPLQGIFVSRDRRGDELL 93 Query: 117 SAEIA---TRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALE 173 + +L +L L+ Q + L + + N+ + Sbjct: 94 YQSGMNAQLVDAHSAIDLEFHPSTRMLIFSLN----DTQIDILGGKEFIEQFTHNKRVVS 149 Query: 174 VKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESI 233 A + + ++ E + + L D+L+ ++ A L+ S Sbjct: 150 FDTLVGHAFYQLAHFVINEIEKDKEAFFHGGLSERLEDSLMASLAAALDTQPRARPLTSA 209 Query: 234 SHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIR 293 + RA +++L+N+ + +T+ +L + S RTL F ++ G P K +R Sbjct: 210 V----PSYVQRAEKFMLDNLDKQLTLQELVDATGTSARTLHRTFRSVRGNTPLGVFKNMR 265 Query: 294 LNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 L+ V EL+ + + AM W F H+G F+ DY+Q F PS T+ + Sbjct: 266 LDKVHAELVRGHAGPGDITRIAMAWAFNHMGLFSADYRQRFGYLPSETVRRAQ 318 >UniRef50_B5S3I4 Probable transcription regulator sugar transport system, abc transporter permease protein n=1 Tax=Ralstonia solanacearum RepID=B5S3I4_RALSO Length = 335 Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats. Identities = 42/298 (14%), Positives = 90/298 (30%), Gaps = 20/298 (6%) Query: 61 KFHGEFTEILLDDIQV--FREYTGLALRQSCLV---WPNSFWFGIPATRGEQGFIGSQCL 115 F G L + + FR +R + ++F + T + + Sbjct: 39 PFSGRLAVERLGAVLLCHFRSTPVRYVRGQREIDRDPGDAFGASLTLTGRAIIAQDGKEV 98 Query: 116 --GSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALE 173 +I F+ P + + + ++ + L Sbjct: 99 VQHPGDIVLFDTTRPFDYVLPSGDDQIVLDIPRALLQSCL--------PNADAFLCTVLS 150 Query: 174 VKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESI 233 + + ++ A ++ + A E + Sbjct: 151 GGSKLGGLVGQMLRDVGTDGPRAGGAGGADAAVAARLGTTVVHLLATAFEVESDSGKSVP 210 Query: 234 SHQSYRRLLSRAREYVLENMSEP-VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRI 292 + R L + + ++ + +S+P + + + HVS R L F A G WL + Sbjct: 211 LPPAGPRTLEKVKAFMRDCLSDPGLDIAAIARDNHVSVRALHRLFAAE-GTTAMRWLWQQ 269 Query: 293 RLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH-QRMREW 349 RL A + L + V + A+ GF + F+ +++ F P+ L + R Sbjct: 270 RLLAGYQSL--AAGRGHRVSEVALMCGFTNFSHFSRAFRRAFGMPPTDLLRPRAQRRA 325 >UniRef50_C6BWP6 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWP6_DESAD Length = 302 Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 104/297 (35%), Gaps = 13/297 (4%) Query: 57 LHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLG 116 L G E L+++ + R +S L++ F + + + G Sbjct: 16 LDDGAVREGINETFLEEVTLVRVSEHKP--KSPLIYEQCFCIAVYGHKICHLSDATFTYG 73 Query: 117 SAEIATRPGGTEFELST--PDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEV 174 E P ++ D +L + + D + + ++ Q+ ++ Sbjct: 74 EDEFLVVPAIVPLDIEVVPDVDNPLLSITVPLDF-----EVIQDLVEFINKYDKQALEKI 128 Query: 175 KEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAM-LEEAQPMVTAESI 233 + + + L + G ++ + L + A + Sbjct: 129 SSSSGIYFEPLTNNVMESTIRLLKVLKSRKEANIFGKQIIREIYYHILMGKHGHLLASAA 188 Query: 234 SHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIR 293 +S L++++ ++ +N + + + L ++S R+ N F A+ + P +LKRIR Sbjct: 189 FGESDYALIAKSLRFLHDNYDKGIDIDHLAKSANMSVRSFYNHFKAVTALTPVQYLKRIR 248 Query: 294 LNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 L R+ ++ Q+ AA G+ QF+ ++++ F P + G Sbjct: 249 LEKARQFMVVQGEQA---SSAAHMVGYESPSQFSREFKRHFGYTPREAVRNSQGMAG 302 >UniRef50_B1G4X3 Transcriptional regulator, AraC family n=1 Tax=Burkholderia graminis C4D1M RepID=B1G4X3_9BURK Length = 312 Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats. Identities = 52/298 (17%), Positives = 99/298 (33%), Gaps = 29/298 (9%) Query: 57 LHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLV-----WPNSFWFGIPATRGEQGFIG 111 L +F G L + + Q +SFW G+ + Sbjct: 35 LSGNQFDGSLRVRTLGTLIISELIAPQHRWQRDGAHIRTGPNDSFWVGLMMKGEGRLAQS 94 Query: 112 SQCL--GSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQ 169 + + ++ FE I V + V+ Sbjct: 95 GRTVVQREGDMVLYDAARPFEFELAAGT-ICIVEVPRKVLD------------FRFPLAD 141 Query: 170 SALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVT 229 + + + Q + + +Q + ++G ++ + A LE + Sbjct: 142 TLTATCIGADMPIGHLLAQMIRESAARDLSGNQGSSGSLVGSAIVDMLAATLE----IQA 197 Query: 230 AESISHQSYRRLLSRAREYVLENMS-EPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAW 288 ++ L+ R + Y+ ++ + V L VS RTL AF G P +W Sbjct: 198 GRPAHVSAHEALVERTKAYIDRHLDVASLDVEQLAAAQSVSSRTLTRAFAQQ-GSTPMSW 256 Query: 289 LKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 L R RL A L ++ V +AA+++GF L F+ +++++ P LTL + Sbjct: 257 LWRRRLEASYCALKEGHAR--NVTEAALRFGFSDLSHFSRAFRKVYGMSP-LTLKKLR 311 >UniRef50_B1YXB0 Transcriptional regulator, AraC family n=2 Tax=Burkholderia ambifaria RepID=B1YXB0_BURA4 Length = 339 Score = 150 bits (378), Expect = 9e-35, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 102/331 (30%), Gaps = 30/331 (9%) Query: 32 VHQRQTTDVYEH-----ALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALR 86 TD ++H A W+Q F G+ + + V+ G + Sbjct: 19 FRSGLRTDAHDHVSMELAEHALRWKQGVP--DAALFKGQLNQ-----LTVYALQYGAEVE 71 Query: 87 QSCLVWPNSFWFGIPATRGEQGFIGSQCLG--SAEIATRPGGTEFELSTPDDYTILGVVL 144 + + G + +G + A + L L V + Sbjct: 72 VAPRPFDGFSLVHTSLAGGAEIECDGHVMGVSAGRTAVLAPTSRIRLRWRSGTRQLIVKV 131 Query: 145 SEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPA 204 + ++ + + + + Q L + + Sbjct: 132 PDSLM----RAVGDRPPDDAAPGLAPGFLLPTALASQWDLIAQSLLNVLAVADDGSIRTE 187 Query: 205 VRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYR----------RLLSRAREYVLENMS 254 R +L + + + A R + E++ + Sbjct: 188 WRDHFERSLALFLLVHCPPSPAAAQANGAPSARGAPAESGSRGGIRQMDALHEFIHARLC 247 Query: 255 EPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDA 314 P+++ DL VS R+L G P L+ IRL+A R +L++ Q+ ++ D Sbjct: 248 APISLEDLAKAAGVSLRSLNVLCRRYHGATPMELLRNIRLDAARAQLLT--DQTASITDT 305 Query: 315 AMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 A+ +GF HLG+F+ Y F E P T R Sbjct: 306 ALTFGFGHLGRFSAYYFARFKELPRDTQKAR 336 >UniRef50_C1AVG9 Putative AraC family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1AVG9_RHOOB Length = 326 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 44/294 (14%), Positives = 91/294 (30%), Gaps = 26/294 (8%) Query: 59 PGKFHGEFTEILLDDIQVFREYTGLALRQS-----CLVWPNSFWFGIPATRGEQGFIGSQ 113 G+F + D+ + ++ + + Sbjct: 51 SGRFEARLSTRQFGDLSLSTVRAHAHSVLRTPAMIGDTDSEDYFLCAVTGGPGRIEQHDR 110 Query: 114 CL--GSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSA 171 + A G F P + + V + ++ + + + Sbjct: 111 SIWLDKGSFAVIDAGQPFRFDFPQRFEQIVVRVPRPLLLGRMSERDVDRVMAQP------ 164 Query: 172 LEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAE 231 + + F+QQ A P+ L + L + V+ Sbjct: 165 VSAASGAGVVVSRFLQQLAALDAAVPDAPAAALSASA-----LDMIVTALADTGGTVSPT 219 Query: 232 SISHQSYRRLLSRAREYVLENMS-EPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLK 290 +H + L RA+ + + E +++ + +L +S R LQ F + G P+ WL Sbjct: 220 QQAHTAD---LHRAQNLLKTRLHDENLSITEAAAELGISLRYLQKIFQS-TGSTPSEWLL 275 Query: 291 RIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 RL R L+S +T+ D A + GF + F+ ++ L+ P + Sbjct: 276 HARLERARMILLSTD---ITIGDLASRVGFKDISHFSRSFRTLYGISPGQYRRR 326 >UniRef50_UPI00016AB122 ethanolamine operon transcriptional activator EutR n=1 Tax=Burkholderia pseudomallei 14 RepID=UPI00016AB122 Length = 237 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 83/239 (34%), Positives = 121/239 (50%), Gaps = 5/239 (2%) Query: 109 FIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRN 168 I ++ + + +A RPG EFEL TP ++I GVV+ V+ R A + + L Sbjct: 1 RIDARPIAADALAFRPGNVEFELLTPAQFSIYGVVVRGAVLRRYAQEVERCG-LDERLPL 59 Query: 169 QSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMV 228 + V E L + Q L + +P D + A+ + Sbjct: 60 VPVVRVGEARLTRLCALLAQRLDD-ADAMSAAGEPLSDCARNDLQAEVLAALFDLCASPA 118 Query: 229 TAESISHQSYRR-LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNA 287 S+ H S RR +++ AR+YVL + S PV V +LC QLHVSRRTLQ F +LG+ P Sbjct: 119 ADASVEHSSRRRKIVAAARDYVLAHRSRPVGVPELCEQLHVSRRTLQYCFQDVLGMAPAT 178 Query: 288 WLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 +L+ +RLN VRR+L + S+ WGFWHL QFATDY+++F +PS TL + Sbjct: 179 YLRALRLNGVRRDLRGRAAASVQDAA--AAWGFWHLSQFATDYRRMFGARPSETLRDAL 235 >UniRef50_B9JBG2 Transcriptional regulator protein n=2 Tax=Proteobacteria RepID=B9JBG2_AGRRK Length = 333 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 89/280 (31%), Gaps = 13/280 (4%) Query: 69 ILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTE 128 +D V R + + +Q + + + AE+ Sbjct: 61 TGIDGFCVMRSSEPKMPHKMIYRP----ALCVIVQGAKQLMLHDRVIDYAEMQALI---- 112 Query: 129 FELSTPDDYTILGVVLSEDVITRQANFLHNPDR-VLHMLRNQSALEVKEQHKAALWGFVQ 187 + P ++ + I F R V+ L + Q Sbjct: 113 ISIELPAAGRVIEASPEKPYIAISLEFDVGMMREVMEQLDVPPKPTGGAGLGIFVEDLSQ 172 Query: 188 QALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQ-PMVTAESISHQSYRRLLSRAR 246 L P VL ++ + L + + S R ++ A Sbjct: 173 PLADCLVRLTGLLATPRAIPVLHPAIMREICFWLLTGPNGGEVCKLVLPDSQTRRIADAI 232 Query: 247 EYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWS 306 + +N +EPV + L +S + F + + P + K++RL RR ++ + Sbjct: 233 RLLRDNFAEPVRIEQLAAAARMSPSSFHQHFKTLTSMTPLQYQKQMRLLEARRLMV---A 289 Query: 307 QSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 S V++AA + G+ QF+ +Y ++F P + + Sbjct: 290 GSANVENAAYRVGYESASQFSREYTRMFGAPPKRDVTELR 329 >UniRef50_Q1MZH6 Putative transcriptional regulator n=1 Tax=Bermanella marisrubri RepID=Q1MZH6_9GAMM Length = 320 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 59/332 (17%), Positives = 110/332 (33%), Gaps = 33/332 (9%) Query: 25 PKVEVDNVHQRQTT---DVYEHALTITAWQQIYD------QLHPGKFHGEFTEILLDDIQ 75 P E + DV I + D Q+ G +I +D+Q Sbjct: 4 PTQEAYPMALFSHHLGKDVDLLRKAIDDYIVNVDVTSLDTQVS---LDGYLADISSEDMQ 60 Query: 76 VFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFI--GSQCLGSAEIATRPGGTEFELST 133 V G+ + +C + + +P + I + L + P +++ Sbjct: 61 VSYVRFGMNVNVACFH-DDVYCLVVPLAGEARIQIPLWQRPLDKQKAFFLPPHVTLDMNY 119 Query: 134 PDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATF 193 D + + +Q L+ V A+ F Sbjct: 120 SADCGHVVLRFPTSDFYQQV--------------FAPVLDAGALLSDQQVRNVVHAVHYF 165 Query: 194 CENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENM 253 L A L + L + + ++ ++ H L A ++++ + Sbjct: 166 VNACTFLKDMASIDALTNELKQDIVDAIHNESFVLENRTLVH---NEKLKSAVDFIIHHP 222 Query: 254 SEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKD 313 + +L +V RTL +F LGI P + RL VR +++ + MT+ Sbjct: 223 EWDYKIEELVAVTNVPIRTLYWSFKHYLGITPYRFFVVNRLKRVRLDILKHGKR-MTITQ 281 Query: 314 AAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 A+ GF HL +F+ Y+ LF E P T ++ Sbjct: 282 IALAHGFVHLSRFSNQYKGLFGELPIETQNKY 313 >UniRef50_B9JGH7 Transcriptional regulator protein n=14 Tax=Proteobacteria RepID=B9JGH7_AGRRK Length = 335 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 40/275 (14%), Positives = 96/275 (34%), Gaps = 14/275 (5%) Query: 67 TEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGG 126 ++ + ++R+ + Q P F I + +G+ Sbjct: 58 HHTPIEGLNLYRQSAAT-VWQHGAYRP---CFAIVVQGHKTLTVGADTYHYG----VGEY 109 Query: 127 TEFELSTPDDYTILGVVLSEDVIT--RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWG 184 L P + V + + + + + + A+ + A+ Sbjct: 110 ILTALDLPVSTQVTNVGSETPYLCFGMALDSERLKELLSRVGIPREAVTAEPVRGLAVNP 169 Query: 185 FVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESIS-HQSYRRLLS 243 + L L +P + + + L ++ +S ++ Sbjct: 170 ASPELLDASLRLLRLLDRPEDIPAMAPLIEQEILYRLLTGPNGPRLLQVAMAESQSNRVA 229 Query: 244 RAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELIS 303 RA ++ N ++P+ + +L + +S +L + F A+ + P + K++RL+ RR +I Sbjct: 230 RAIAWIRGNFTQPLRIEELAERAGMSVSSLHHHFKAVTAMTPIQYQKQLRLHEARRLMI- 288 Query: 304 PWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKP 338 + + V A + G+ QF+ +Y +L+ P Sbjct: 289 --VEQLDVGSAGHRVGYQSPSQFSREYSRLYGLSP 321 >UniRef50_Q38ZW3 Transcriptional regulator, AraC family n=2 Tax=Burkholderia cepacia complex RepID=Q38ZW3_BURS3 Length = 324 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 56/343 (16%), Positives = 113/343 (32%), Gaps = 30/343 (8%) Query: 17 LPENLKLTPKVEVDNVHQRQTTD--VYEHALTITAWQQIYDQLHPGKFHGEFTEILLD-- 72 +P+ + V + D V A T+ + + L Sbjct: 1 MPDTSTEIATISTRAVRGHERVDFWVDHVARTLVRIECSGK--SSEGIDASLRKRDLGLF 58 Query: 73 ---DIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCL--GSAEIATRPGGT 127 DI R ++ + + F C+ G ++ Sbjct: 59 GACDIVANRHAVVRTSHNIHADQRDAVFICLMHAGQGYTFQDVDCMQHGPGDLVLYDTSM 118 Query: 128 EFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQ 187 + P D + + + DV + + R +S +++ A W V+ Sbjct: 119 PYGHGFPADMAMTVLDVPRDVFEAR----------VGPWRYRSLVKIDRDDGVASWA-VR 167 Query: 188 QALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRARE 247 Q A PE R+ A+ +++ + ++ +S LSRA+ Sbjct: 168 QVYALLAAPPEPTSDARERRA------AAILDLVQSMLRLRDGDASPTKSTVHTLSRAKA 221 Query: 248 YVLENM-SEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWS 306 ++ ++ + + + +++S R L F I G+ ++ RL R +L Sbjct: 222 FIDSHLADDDLDSQSVSRAINLSPRQLARVF-EIEGMPLTRYILARRLERCRADLRDRSL 280 Query: 307 QSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREW 349 + +TV + A +WGF + F+ Y+ F E PS T + Sbjct: 281 KHLTVSEIAFRWGFNNSAHFSRSYRARFGETPSDTRAPAPADA 323 >UniRef50_B8KQ27 Transcriptional regulator, AraC family n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KQ27_9GAMM Length = 325 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 60/325 (18%), Positives = 113/325 (34%), Gaps = 18/325 (5%) Query: 26 KVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHG-EFTEILLDDIQVFREYTGLA 84 ++D V + +H+ T+ Q + G+ + +T QV R + + Sbjct: 15 SSDLDEVREFVAIRAGDHSRTLQNKTQFNWSVEAGRTNTLGYTASTATGAQVIRATSSCS 74 Query: 85 LRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVL 144 S I + + + ++ P + LS + + L Sbjct: 75 TV--------SLHLPINHSSNYRIGCQTLATSPDQLLVLPPNHTYTLSNLGGTG-VSITL 125 Query: 145 SEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPA 204 D++ R+ + + P R H + + L L T ++ + + Sbjct: 126 DADLLLREIDEI-WPGRRGHSGLVACEIRLSRSEVNKLLSIRNVLLGTVADSAD-----S 179 Query: 205 VRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCN 264 R+V L + A L A R ++ ++ ++S+ + + L Sbjct: 180 QRRVAAKTLEQDITAWLAAAIVRQAGVKPLSPRRRSRVTSLENWIDNHLSQTIDLEALTA 239 Query: 265 QLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLG 324 V L A A G+ P + RL + L + +V A GF HLG Sbjct: 240 VSGVGAHALAKATSAARGMSPMRLVLTRRLEMAHKLLRESREE--SVTAIAHSCGFNHLG 297 Query: 325 QFATDYQQLFSEKPSLTLHQRMREW 349 +FA +YQ + EKPS TL ++ R+ Sbjct: 298 RFANEYQAAYGEKPSQTLAKKSRKG 322 >UniRef50_B4EQD3 AraC family regulatory protein n=13 Tax=Proteobacteria RepID=B4EQD3_BURCJ Length = 338 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 52/307 (16%), Positives = 95/307 (30%), Gaps = 26/307 (8%) Query: 43 HALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPA 102 A + W + D L + ++ R C+V P FG+ Sbjct: 42 LAERVARWTEGVDHLD----------TAIPNLSFHR-REAPTQPMECMVEP---SFGLVV 87 Query: 103 TRGEQGFIGSQCLGSAEIATRPGGTEF--ELSTPDDYTILGVVLSEDVITRQANFLHNPD 160 + + + S + L P I+ + + Sbjct: 88 QGAK------RVMQSGDAYIYDADRFLITSLDLPGSTQIIEASPDKPFLGLGLKLDFRVM 141 Query: 161 RVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAM 220 L M + + + L P VLG + + Sbjct: 142 AELMMQVAPDHDDAPAGRGLVVGDMTEPLYDALNRLLALLDDPHAIAVLGPYIEREIYYR 201 Query: 221 LEEAQPMVTAESISHQSYR-RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHA 279 L + I+ + +SRA ++ + E + V DL Q+ +S T + F Sbjct: 202 LLTSDQGGRLRQIASTGSQCNRVSRAIRWLRAHYDESLRVDDLAAQVQMSSSTFHHHFRQ 261 Query: 280 ILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPS 339 + G+ P + K IRLN RR +++ + + AA + G+ QF +Y +LF P Sbjct: 262 LTGMSPLQYQKWIRLNEARRLMLAERLDAAS---AAFRVGYASPTQFNREYSRLFGNSPR 318 Query: 340 LTLHQRM 346 + Sbjct: 319 RDIDSLR 325 >UniRef50_A5V4Y7 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V4Y7_SPHWW Length = 329 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 87/299 (29%), Gaps = 25/299 (8%) Query: 59 PGKFHGEFTEILLDDIQV-FREYTGLALRQSCLVW----PNSFWFGIPATRGEQGFIGSQ 113 F GE I IQ+ E +R++ + F + S+ Sbjct: 47 SDSFSGELRNIAFGAIQISMVESVAQRVRRTRSRIAGSTRDHFLLSLQLRGTGAICQDSR 106 Query: 114 C--LGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSA 171 L + A +EL D ++ + + L + +T L + Sbjct: 107 VAKLSPGDFALYDSTRPYELRFDDSFSQVVLRLPRETVT-------------GRLIDSHM 153 Query: 172 LEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAE 231 L + G + + L N + M L E Sbjct: 154 LTARRIDGQRGVGLLASSFIRQLHEQRADIDDLSLGRLQANAVDLMATALAEQTGGQART 213 Query: 232 SISHQSYRRLLSRAREYVLENMSE-PVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLK 290 + R+ R ++ N+ + +T + + +S+R L+ F + + W+ Sbjct: 214 NEGQAIIRQ---RVCAFIDRNLGDHRLTCEGIASAHGISQRYLRKIFESS-STTVSDWIW 269 Query: 291 RIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREW 349 RL + +L P ++V GF F+ ++ F P + Sbjct: 270 SRRLEQAKADLSDPLLAHVSVTAIGFDVGFKDAAHFSRAFRSRFGMSPREWRNSAGSRH 328 >UniRef50_B8IWN2 Transcriptional regulator, AraC family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IWN2_METNO Length = 330 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 42/298 (14%), Positives = 88/298 (29%), Gaps = 25/298 (8%) Query: 61 KFHGEFTEILLDDIQVFREYTGLALRQS-----CLVWPNSFWFGIPATRGEQGFIGSQCL 115 F G + + +G + ++ F I + + + Sbjct: 46 AFAGTLRIRSFERGTLADIASGGQVLTRTADRIRRAKSDAVLFNIILSGHCRLEQDGRQA 105 Query: 116 --GSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALE 173 + + + + T D+ + V++ + R L A+ Sbjct: 106 VPTAGSLFLYESARPYHIETSPDFRTIVVMIDRGRLERSLGNL--------RFYTGRAMC 157 Query: 174 VKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESI 233 + F Q + P+ + + ++ + M + Sbjct: 158 SVDTVARIAGSFWQTLSSQLDGVPDAAANTL--------IEAGIDVVIPALRSMAGDRAE 209 Query: 234 SHQSYRRLLSRAREYVLENMS-EPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRI 292 ++ + RA ++ E +TV D+ VS R LQ F G+ P L++ Sbjct: 210 GSEACELTVMRATAFIASAFHRESLTVDDIAAAAGVSTRRLQECFKE-KGLTPMEQLRKH 268 Query: 293 RLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 RL L Q+++V Q GF F+ +++ + PS R Sbjct: 269 RLKHAHDRLNDGHCQNLSVLSIMSQSGFSDPAHFSRAFRKEYGISPSAARSASQRRPA 326 >UniRef50_A3WIM7 Probable transcriptional regulator n=1 Tax=Idiomarina baltica OS145 RepID=A3WIM7_9GAMM Length = 309 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 51/285 (17%), Positives = 104/285 (36%), Gaps = 23/285 (8%) Query: 65 EFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEI---- 120 T+ +DDI + +R ++ +G+ + ++ Sbjct: 25 SLTQTAIDDISLMHLSNPSQVRPIIYRP----AVCFMLQGAKELLVGNTKVTYEQMNYLL 80 Query: 121 --ATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQH 178 P D +G+ + D + L DR+ +++QS+L V Sbjct: 81 IPVVFPVSGRVS-QASPDNPYVGLSFNFDTAELRELILLLGDRIPATVKSQSSLCV---- 135 Query: 179 KAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISH-QS 237 + + E L +P KVL + + L + + + Sbjct: 136 ----GKVDSEMMQLLERATELLEKPDDAKVLFPLIRRELMYRLLLGELGGLLRDFNLIDT 191 Query: 238 YRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAV 297 +++A + + + EP+ V DL + +H+S AF ++ + P + K++RL+ Sbjct: 192 QASRIAQAIDIIKRRLHEPLRVKDLASAVHLSESAFYQAFKSVTAMSPIQFQKKLRLDEA 251 Query: 298 RRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 RR ++ S V A Q G+ QF+ +Y +LF + P + Sbjct: 252 RRIMLFEGSD---VSTACYQVGYESPSQFSREYSRLFGQSPKADI 293 >UniRef50_A1SHQ2 Transcriptional regulator, AraC family n=1 Tax=Nocardioides sp. JS614 RepID=A1SHQ2_NOCSJ Length = 344 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 59/312 (18%), Positives = 104/312 (33%), Gaps = 10/312 (3%) Query: 39 DVYEHALTITAWQQIYD---QLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNS 95 D A I+ Q F + +L+ + + R + Sbjct: 34 DPDLAAELISEAYLPVRVRPQHAGTDFQMQMAVLLVGTMTAGVLTVAASSRITAEETE-Q 92 Query: 96 FWFGIPATRGEQGFIGSQ---CLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQ 152 F + + G + ++ DD + L +++ + + + Sbjct: 93 FHLNVTLRGHAVSRRRGAGRIVTDAGGGVLFDPGQDADILWSDDCSQLCLMIPRETLESE 152 Query: 153 ANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDN 212 L V L L + L VQ ++ P+V + L Sbjct: 153 IAALLGRT-VSKPLAFTPHLRLDSLAGRLLAPLVQVLVSELHGPSAVQRFPSVGRHLEGL 211 Query: 213 LLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRT 272 +L A+ + S + A E + P T + L ++H+S R Sbjct: 212 VLDALLLGQRHNYTDLLDRPSSAARTP--IQHAVELIHSRPEHPWTTVGLAQEVHLSVRA 269 Query: 273 LQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQ 332 LQ F + P A+L+ +RL R L+ + V+D A GF H G+F+T Y++ Sbjct: 270 LQEGFRRHHDLPPMAYLREVRLLRAHRLLLGADPDGLQVQDVAAGLGFKHHGRFSTLYRE 329 Query: 333 LFSEKPSLTLHQ 344 F E PS TL + Sbjct: 330 RFGEPPSATLSR 341 >UniRef50_D1UN50 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria RepID=D1UN50_9BURK Length = 379 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 114/326 (34%), Gaps = 24/326 (7%) Query: 26 KVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLAL 85 HA +++D L P + T L+ + + R + Sbjct: 52 SPHSPQSSLSSAPSADAHAAQ-QRLTEVFDMLAPKQ---GMTRSSLEGVNLMR--ANTPM 105 Query: 86 RQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSA--EIATRPGGTEFELST--PDDYTILG 141 + +++ S I ++G++G Q + FE T LG Sbjct: 106 PRMPVMYEPS--IVIVCQGRKRGYLGDQVFQYDAQQYLVLSVPLPFECETEASPGEPFLG 163 Query: 142 VVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLH 201 + + D +T A L + RN+ AL VQ+ L E L Sbjct: 164 ISIRVD-LTMVAELLMALNETQGTARNEPLGIYSTPLDPALSSAVQRLL-------EALM 215 Query: 202 QPAVRKVLGDNLLMAMG-AMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVL 260 P ++L ++ + +L Q +++HQ++ +++A + + + V Sbjct: 216 SPLDARILAPGIVREICYRVLTGEQGDAIRAALTHQNHFGRIAKALRRIHADYHGALDVD 275 Query: 261 DLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGF 320 L + +S F A+ P ++K RL+ R ++ + AA + G+ Sbjct: 276 TLAAEAGMSLAVFHAQFKAVTATSPMQYVKTTRLHHARLLMVQ---DGLNAGAAAARVGY 332 Query: 321 WHLGQFATDYQQLFSEKPSLTLHQRM 346 QF+ ++++LF P + + Sbjct: 333 ESASQFSREFKRLFGLSPVDEVKRMR 358 >UniRef50_A6GGU5 Transcriptional regulator, AraC family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GGU5_9DELT Length = 301 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 40/284 (14%), Positives = 102/284 (35%), Gaps = 17/284 (5%) Query: 67 TEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQC--LGSAEIATRP 124 TE + ++VFR + + + +G+Q + Sbjct: 27 TETAVPGLRVFRATEPVGPFAVEYQP----CLCVVGQGRKAATVGAQTCEYDPDQYLVVA 82 Query: 125 GGTEFELSTPDDYTILGVVLSEDVITRQAN-FLHNPDRVLHMLRNQSALEVKEQHKAALW 183 L P I+ + ++ + ++L + ++ E + Sbjct: 83 ------LPLPVSARIIEASREQPFLSMVLAIDVAELGQLLMAMPDEPEPERAPSTAMWVS 136 Query: 184 GFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQ-SYRRLL 242 + + P +VLG ++ + + S++ + + + + Sbjct: 137 SIEPRLRDAVLRLLQAAEDPTEARVLGPGIVREILFHVLGGDQGALLRSLALRNGHGQRV 196 Query: 243 SRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELI 302 RA ++ ++ + + V + + VS LQ+ F + G+ P +LKR+RL+ ++ Sbjct: 197 VRAIRFMQDHYEQALDVATIAKSVGVSASRLQHVFKDVTGLSPIQYLKRVRLHRAHVMIL 256 Query: 303 SPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 + + +AA + G+ QF+ ++++ F PS + ++ Sbjct: 257 TEGLGA---GEAAFRVGYGSPSQFSREFKRQFGLSPSHAVREQQ 297 >UniRef50_UPI0001B55AC3 AraC family transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B55AC3 Length = 329 Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 61/289 (21%), Positives = 103/289 (35%), Gaps = 15/289 (5%) Query: 59 PGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWP-NSFWFGIPATRGEQGFIG--SQCL 115 + + + V R G A+R S L + F +P + G S L Sbjct: 44 RDRLSARLDHLAAGSVSVNRLRYGAAVRISELAPEQDEFLLSLPVAGRARFAYGTASAVL 103 Query: 116 GSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVK 175 + F+L D++ + + L ++ R A L + + + A V Sbjct: 104 RPGTASVVSPYRAFQLDFDDEFEQVVLRLDRPLVERTAALLAGRPGPVAVQFDLRADTVS 163 Query: 176 EQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISH 235 A E +L R + LL + T + Sbjct: 164 PGVLA------------LVEAAIHLSAEGARPGHLEALLAETLLLGHPNTLSETLAADGK 211 Query: 236 QSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLN 295 + RA +Y+ +++E ++ ++ VS R+LQ F G + WL+ RL+ Sbjct: 212 PPSSARVRRAMDYLRAHLAESFSMAEVARHCGVSLRSLQIGFRRETGRTLSEWLREQRLD 271 Query: 296 AVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 R L + S TV A+ GF HLG FA +++ F E PS L + Sbjct: 272 RARALLAAADPASTTVTATAIACGFVHLGDFAAQFKRRFGESPSAVLRE 320 >UniRef50_A6B9E2 Transcriptional regulator, AraC family n=5 Tax=Gammaproteobacteria RepID=A6B9E2_VIBPA Length = 307 Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 107/314 (34%), Gaps = 31/314 (9%) Query: 43 HALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPA 102 A I W +Q + ++ R T + A Sbjct: 19 LAKLIDRWTGDANQYD----------TPISGLRFSRWTTPTPPTSYTHNPS----ICLIA 64 Query: 103 TRGEQGFIGSQCLGSAEIATRPGGTEF-----ELSTPDDYTILGVVLSEDVITRQANFLH 157 ++ +G + + + ++ LG+++ D+ + Sbjct: 65 QGRKRVLLGEESFIYDANHFLISSIDLPIIANIIEASEEQPYLGLIMELDLTEISQLIVD 124 Query: 158 NPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAM 217 + Q + V E + L F E L++ K+L + + Sbjct: 125 GELAFIQSKEAQKGIAVGE--------LSESLLDAFVRLAELLNEGQNIKILAPIIKREI 176 Query: 218 GAMLEEAQPMVTAES-ISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNA 276 L ++ ++ S+ +++A +++ N +P++V DL + +S+ + Sbjct: 177 FYRLLMSEQGTRLHQIVTAGSHSHQIAKAIDWLKNNFVKPLSVGDLASYTGMSKSSFYTH 236 Query: 277 FHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSE 336 F ++ + P + K++RL+ RR +++ +M + G+ QF+ +Y +LF Sbjct: 237 FRSMTSMTPLQFQKKLRLSEARRLMLTENLDAMAAT---FKVGYESPSQFSREYSRLFGA 293 Query: 337 KPSLTLHQRMREWG 350 PS + G Sbjct: 294 PPSKDIKSLRENLG 307 >UniRef50_Q0FPK9 Transcriptional regulator, AraC family protein n=3 Tax=Rhodobacteraceae RepID=Q0FPK9_9RHOB Length = 348 Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 90/280 (32%), Gaps = 13/280 (4%) Query: 65 EFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIG--SQCLGSAEIAT 122 I + L N +P + + + + + Sbjct: 58 RVNSATFPLIGTSLLSVASSGHDIDLADANFLTIMLPTRGVTRVRMDRTERVITEGGVLA 117 Query: 123 RPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAAL 182 + P +++ + R +V + + + Sbjct: 118 LGPSERWTQVDPRGNRDFRANVAKIDLKRV-----GQGKVFPGVATDPLVPISTSALEGF 172 Query: 183 WGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLL 242 G ++ + L + +L + +L + S L+ Sbjct: 173 RGLMRYLFSDLSSPAPTLVHQPASDLFAALVLEHLRHLLASDGADPALD----GSQDDLV 228 Query: 243 SRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELI 302 RA +Y+ + +P+TV + + + VS R LQ+AF G P L IRL R L+ Sbjct: 229 RRALDYMSAYVGDPLTVRTIADAVGVSTRRLQDAFRLKTGRTPWEHLTGIRLENARTRLL 288 Query: 303 SPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTL 342 + +V A GF HLG+F+ Y+ + E PS+TL Sbjct: 289 AAAGP--SVTAIAFDCGFSHLGRFSQTYRNTYGEAPSVTL 326 >UniRef50_Q6W1W1 Probable AraC family transcriptional regulatory protein n=2 Tax=Rhizobium RepID=Q6W1W1_RHISN Length = 343 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 96/254 (37%), Gaps = 6/254 (2%) Query: 94 NSFWFGIPATRGEQGFIGSQCLGSAE--IATRPGGTEFELSTPDDYTIL-GVVLSEDVIT 150 +P + G G + + + + + + ++ ++++ V+ Sbjct: 78 EYLSIVVPRSGGMGVTYGPRTAEAGQGELLLYNNFEPNSVIMRGEENVVDELLINWSVVL 137 Query: 151 RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLG 210 + L + + + + + + L P + Sbjct: 138 QTLGQTFEAP-FDGSLDLVPQVSLATPAGQLIGNLTETIMGGIRNDGPLLQSPIAMAHVT 196 Query: 211 DNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSR 270 L + ++ + + R + RA E++ N+S P+T+ + VS Sbjct: 197 QALADVVVRLVPHRLSHLLDKKPCL-IAPRHVRRAIEFMQANISRPITMPMVAEAAGVSV 255 Query: 271 RTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDY 330 R L+ F A P A+L R+RL A R++L+ P + + ++ ++WGF+H G+F+ Y Sbjct: 256 RALETGFRAFRDTTPAAYLLRLRLRAARQDLLDPDN-NQPMRKICLKWGFFHFGRFSAVY 314 Query: 331 QQLFSEKPSLTLHQ 344 + + E PS T + Sbjct: 315 RSTYGENPSDTRRR 328 >UniRef50_C4RJP1 AraC family transcriptional regulator n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RJP1_9ACTO Length = 359 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 62/323 (19%), Positives = 103/323 (31%), Gaps = 10/323 (3%) Query: 28 EVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGK---FHGEFTEILLDDIQVFREYTGLA 84 + + T D E + A + G+ F T + R + Sbjct: 41 DSPPWARLATDDPDEAHRWLLAAYPDHRIRAFGRTGEFTFRATHARFGAASLARVRYAMN 100 Query: 85 LRQSCLVWPNSFWFGIPATRG--EQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGV 142 + + + + G G G+ ++ P D ++ + Sbjct: 101 -ADNDVFAQDVVGVAEVLSGGWGLDAGAGEVMAGAGDLLLVPP-RRTRTVLHRDMEVVAL 158 Query: 143 VLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQ 202 L + R A V LR Q L V + + Sbjct: 159 ELPLAEVRRVAQERCGIAPVN--LRFQGLLPVSPAAAGLWRDTRRYLTRVVLPDTAFGAN 216 Query: 203 PAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDL 262 V+ L + + RA Y+ E+ + +TV D+ Sbjct: 217 ALVQAEALRLLAAVALSTFPNTTMTEAPTRGDGAIAPAAVRRAVAYIEEHADQALTVTDV 276 Query: 263 CNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQ-SMTVKDAAMQWGFW 321 + R LQ AF L P +L+R+RL V R+L + +TV A +WGF Sbjct: 277 AIAARLGARALQQAFRRYLDTTPTLYLRRVRLERVHRDLQAAEPGAGLTVAAVAARWGFV 336 Query: 322 HLGQFATDYQQLFSEKPSLTLHQ 344 HLG+FAT Y++ + PS TL + Sbjct: 337 HLGRFATQYRRAYGRSPSQTLRE 359 >UniRef50_A5V473 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V473_SPHWW Length = 358 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 55/339 (16%), Positives = 115/339 (33%), Gaps = 20/339 (5%) Query: 20 NLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLH------PGKFHGEFTEILLDD 73 L +++VH+ + A + + +++ L D Sbjct: 17 FLANAAAPALESVHRHSFASL-RPADALDSVTRVFFPHEVVVRSNDKHLDFNHCSASLGD 75 Query: 74 IQVFREYTGLALRQSCL-VWPNSFWFGIPATRGEQGFIGSQ--CLGSAEIATRPGGTEFE 130 I + + G + + F F + T Q S + + Sbjct: 76 ISLNQIAYGADVDVLITQLQRTHFVFVVALTGEAVVEFNQQSWAFRSGDSVLLSPSVRYN 135 Query: 131 LSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQAL 190 D+T L + + + V+ + A+L GF++ Sbjct: 136 FQMGQDHTHLAIGIPCSRLIGSGRPYEAVHNVVERAADAP-----NGGAASLMGFIEYLC 190 Query: 191 ATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVL 250 V ++ L + A L + + V ++ + RA +++ Sbjct: 191 TELHRGSPIFGMQDVVAANENSFLAMIRAALFDREMPVRQAAV----LPVFVRRAEQFIA 246 Query: 251 ENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMT 310 ++ + + + D+ V RTL + F +G P WL+ RL + R ++I+ + ++ Sbjct: 247 RHLKDDIQLSDIVEAAGVPARTLYHGFERFMGHSPMRWLRLRRLESARADIIASDGE-IS 305 Query: 311 VKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREW 349 V A Q+ H G+FA Y++++ E PS TL + Sbjct: 306 VTALANQYWIGHGGRFANMYREIYGEPPSATLGRARATA 344 >UniRef50_A1WI21 Transcriptional regulator, AraC family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WI21_VEREI Length = 317 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 91/301 (30%), Gaps = 26/301 (8%) Query: 56 QLHPG---KFHGEFTEILLDDIQVFREYTG----LALRQSCLVWPNSFWFGIPATRGEQG 108 QL G +F G+ L +++ + LRQ C +P + Sbjct: 27 QLSFGDEHRFDGQIDIWDLGTVELSLLQSSALAYRRLRQHCRAQERQMLVTMPFQSQVEF 86 Query: 109 FIGSQ--CLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHML 166 + + ++ D + + L + R+ Sbjct: 87 TQLGRSTRCAPGQFLLESSEEPYDFGHGQDNAMWVLKLPVAAL---------KARIGEPS 137 Query: 167 RNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQP 226 R + L L + H VR ++ L+ + L+ Q Sbjct: 138 RFCARQY---DSLQGLGRLFHDYLQLVARHCRADHGSHVRSLMASQLIDLLALSLQ--QH 192 Query: 227 MVTAESISHQSYRRLLSRAREYVLENMSEP-VTVLDLCNQLHVSRRTLQNAFHAILGIGP 285 +S L+R +V ++S+P ++ + +S R L F G Sbjct: 193 PDALQSSHSAVRDAHLARIEAHVHRHLSDPALSPQSIAQASGISLRYLHQLFED-TGQSV 251 Query: 286 NAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 W++ +RL + L Q TV A GF QF+ +++ F PS L Sbjct: 252 AQWIRELRLQSAHEALSRANGQ-TTVAQIAYGAGFGDQAQFSHAFRKKFGHAPSEMLRSS 310 Query: 346 M 346 Sbjct: 311 R 311 >UniRef50_Q3A5L7 Transcriptional regulator, AraC family n=12 Tax=Proteobacteria RepID=Q3A5L7_PELCD Length = 307 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 46/290 (15%), Positives = 97/290 (33%), Gaps = 13/290 (4%) Query: 63 HGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIAT 122 GE + + +FR + A ++ +G + L Sbjct: 25 QGELHTTAIPGLSLFRRTEPTEPVTGMYQPS----ICLIAQGAKRVKLGDESLVYDAQHY 80 Query: 123 RPGGTEFELSTPDDYTILGVVLSEDVITRQAN-FLHNPDRVLHMLRNQSALEVKEQHKAA 181 + P I + + + L +++ + + A Sbjct: 81 LITS----VHLPTVVQITEASPEKPYLGLRLTFDLREVSQLMADSQLPPPRTRESSRGMA 136 Query: 182 LWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESIS-HQSYRR 240 + L F + L++ +L + + L I+ S + Sbjct: 137 TGEVTRPLLNAFQRLIDLLNEDEDIPILAPVIQREIIYRLLVGDQGARLRQIATAGSQSQ 196 Query: 241 LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE 300 ++RA E++ N ++P+ + DL Q +S T + F ++ + P + K++RL RR Sbjct: 197 QIARAIEWLKGNFTQPLRIDDLAEQASMSTSTFHHHFRSMTALSPLQYQKQLRLREARRL 256 Query: 301 LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 ++ + T A Q G+ QF+ +Y +LF P + + G Sbjct: 257 MLMERLDAAT---AGFQVGYESPSQFSREYSRLFGAPPLRDITNLRQVAG 303 >UniRef50_C9YUR8 Putative transcriptional regulator n=1 Tax=Streptomyces scabiei 87.22 RepID=C9YUR8_STRSW Length = 299 Score = 147 bits (370), Expect = 7e-34, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 88/267 (32%), Gaps = 19/267 (7%) Query: 86 RQSCLVWPNSFWFGIPATRG-EQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVL 144 R + G+ T G I L +I G P + ++ Sbjct: 48 RLTGRTGGTYLLVGVGGTGAPLAGRIPDVHLRPGDICFYDAGHPPSPDLPAHCRLKVFLV 107 Query: 145 SEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPA 204 S + + + L + + + L + L+ + P Sbjct: 108 SREELGLEDGDL------------RRVVAAPVARTSRLGTLLSPFLSELADTVSA--DPP 153 Query: 205 VRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSE-PVTVLDLC 263 V ++L N + + + + E+ + +++R ++ E++S+ ++ + Sbjct: 154 VAEMLARNAVNLLATL--ATERSGQDEAQTPGVRSPMVARVVRFIDEHLSDADLSPEVIA 211 Query: 264 NQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHL 323 H+S R L F G W++R RL RR+L+ T+ A +WGF Sbjct: 212 GAHHISVRYLHKLFRDE-GTTVGRWIQRRRLEECRRDLVHGLRNRRTIASVAGRWGFLSA 270 Query: 324 GQFATDYQQLFSEKPSLTLHQRMREWG 350 F+ ++ + PS G Sbjct: 271 THFSRVFRAAYGMSPSEWRDTAGHSGG 297 >UniRef50_A0QJX7 Transcriptional regulator, AraC family protein n=2 Tax=Mycobacterium avium RepID=A0QJX7_MYCA1 Length = 358 Score = 147 bits (370), Expect = 8e-34, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 95/256 (37%), Gaps = 6/256 (2%) Query: 90 LVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVI 149 + I G G G L V ++ +V+ Sbjct: 106 EIPAGDTVVVIQPRAGALNVAGGPLATPDFPLLVAHGMACVLHCHGA-RFDVVTIAAEVL 164 Query: 150 TRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVL 209 + A H + + + A + A+ T P+ QP + + Sbjct: 165 QKVAAEWH--TALSQQTQFLNWRPRSRAAVRAWHRALDYAMLTLAS-PDTARQPLIAAGM 221 Query: 210 GDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVS 269 L A+ + +S + L A ++ + +E + + D+ +H++ Sbjct: 222 AGLLAGALLECYPSNL--TEQDPVSDLALPETLKEAVSFIHRHAAEDIGINDVAAAVHLT 279 Query: 270 RRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATD 329 R +Q F L P +++R+RL+ +EL++ + S TV + A +WGF H G+FA Sbjct: 280 PRAVQYLFRRQLDTTPTEYMRRVRLSRAHQELVAATTASSTVTEIAQRWGFAHTGRFAVL 339 Query: 330 YQQLFSEKPSLTLHQR 345 Y+Q + + P TL Q+ Sbjct: 340 YRQTYGQSPHTTLRQQ 355 >UniRef50_C9N369 Transcriptional regulator, AraC family n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9N369_9ACTO Length = 315 Score = 147 bits (370), Expect = 8e-34, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 81/255 (31%), Gaps = 8/255 (3%) Query: 94 NSFWFGIPATRGEQGFIGSQ--CLGSAE-IATRPGGTEFELSTPDDYTILGVVLSEDVIT 150 ++ + G E P + + + ++ Sbjct: 65 DAICLITVHKGSMVDTTDGRNDVYGPGETFLIAPPDRPYTGALHSA-RYTITMFDPALLD 123 Query: 151 RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLG 210 R A N D +R V L V P + V + Sbjct: 124 RVAAAGANSD---GPVRLTGQRPVDAAANRRLGSTVAFLRDQVLTGP-AVEGLVVATAVQ 179 Query: 211 DNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSR 270 + + A+ + S ++ L RA+ ++ EN + + D+ V+ Sbjct: 180 HLAAVTLSALPSITAQEEDHRTDSRDAHTETLRRAKAFIEENAHRTIGLADIAAAAFVTP 239 Query: 271 RTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDY 330 R +Q AF P L+ +RL +L+ +V A WGF H+G+FA Y Sbjct: 240 RAVQYAFSRHTDTTPLGHLRHVRLTRAHVDLVKADPHVSSVTRIAAAWGFPHVGRFAAAY 299 Query: 331 QQLFSEKPSLTLHQR 345 ++ + P++TL Sbjct: 300 RRHYGVTPAVTLRAH 314 >UniRef50_A0NVI5 Transcriptional Regulator, AraC family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NVI5_9RHOB Length = 298 Score = 146 bits (369), Expect = 9e-34, Method: Composition-based stats. Identities = 48/283 (16%), Positives = 94/283 (33%), Gaps = 12/283 (4%) Query: 69 ILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTE 128 + + + R+ + F + +Q ++GSQ + + + G Sbjct: 26 VGAGSMTLVRQRQPTLIYPVVYRP----IFCLVLQGEKQTYLGSQTVRFGAMQSLIVG-- 79 Query: 129 FELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQ 188 L P ++ +E + R L + ++ A Sbjct: 80 --LDLPAQARVVSASRTEPYVALALPLDMALIRELALEIDRPGKSSPASGAVASGRADAA 137 Query: 189 ALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESIS-HQSYRRLLSRARE 247 + E P KVL LL + L A+ ++ S+ ++R Sbjct: 138 IVDAMRRLFELSQMPEAGKVLLPLLLREIHYWLLTAKHGAILRQVAEQDSHAARIARVIA 197 Query: 248 YVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQ 307 + +++ + V DL +S F + G P + K++RL RR L ++ Sbjct: 198 GIRRDIAASLRVDDLAGDAGMSVSAFHAHFKELTGTSPLQFQKQLRLMEARRLL---QAE 254 Query: 308 SMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG 350 ++V AA Q G+ QF+ +Y + F P Q + Sbjct: 255 KLSVSRAAFQVGYESPTQFSREYSRHFGLPPRADKAQGPSQAA 297 >UniRef50_C6WIT0 Transcriptional regulator, AraC family n=2 Tax=Actinomycetales RepID=C6WIT0_ACTMD Length = 331 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 49/233 (21%), Positives = 89/233 (38%), Gaps = 9/233 (3%) Query: 114 CLGSAEIA-TRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSAL 172 G ++ ++ +L ++ + + H Sbjct: 107 TFGPGDLFSFAQPDRPYQGR-ARQARYSITMLDPALLNQVVGGEEQVRLLDHR------- 158 Query: 173 EVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAES 232 V A L + P P + L A+ A P+ + + Sbjct: 159 PVDAVTAATLRRVIDHVRDDVLAAPGATASPLLVGAATRYLAAAVLAAFPTTAPVGPSAA 218 Query: 233 ISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRI 292 S ++ R + RA ++ N ++ ++ HV+ R +Q AF LG P A+L+R+ Sbjct: 219 DSRDAHPRTVRRAVAFIEANAGRDLSAAEIAAAAHVTPRAIQLAFRRHLGTTPTAYLRRV 278 Query: 293 RLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQR 345 RL+ R +L++ S TV + A++WG+ G F+T Y++ E PS TL R Sbjct: 279 RLDGARAQLLAAEPGSTTVTEVALRWGYSRPGVFSTHYREAHGEPPSRTLRGR 331 >UniRef50_B2IIE7 Transcriptional regulator, AraC family n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IIE7_BEII9 Length = 316 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 50/328 (15%), Positives = 112/328 (34%), Gaps = 28/328 (8%) Query: 26 KVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLAL 85 ++ V + + +E AL + + + + + D +++ + T Sbjct: 7 SLDSSLVPHSHSINYWEEALAALCGRLQVEIVGDDRIDAFANYVDFDGLRLCQIKTSGHR 66 Query: 86 RQSCLVW-----PNSFWFGIPATRGEQGFIGSQCL--GSAEIATRPGGTEFELSTPDDYT 138 W G + + +S+ + Sbjct: 67 VALPRSWLGQSEHPVVKVHFQTKGTSIFEQGQTRIVLSPGDCLAYDVAQPHLISSLEYTE 126 Query: 139 ILGVVLSE-DVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENP 197 ++ + ++ R+ R A+ + +H FV+ L + Sbjct: 127 HEVAIIPKKSLMERRIAA-----------RQFPAVHMSTEHGDI--RFVRNFLLSALRQA 173 Query: 198 ENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSE-P 256 L ++ K + D LL + L E +P + +S L RA++Y+ +N+ + Sbjct: 174 STLSNKSI-KPIADALLDVLIIPLSEGRP----QGVSSDRRETLRIRAQDYIRQNLGDTD 228 Query: 257 VTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAM 316 +T+ + L S+R L F GI + ++ RL+ +L + T+ + A+ Sbjct: 229 LTIDRIARALGCSKRYLHMIFMDE-GITVSRFIWNERLDRCFYDLKDAHQSNKTITEVAI 287 Query: 317 QWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 +WGF F+ ++ + PS L + Sbjct: 288 EWGFSSPSHFSRSFKDRYGFTPSTALKR 315 >UniRef50_B9QYF5 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QYF5_9RHOB Length = 301 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 106/298 (35%), Gaps = 2/298 (0%) Query: 50 WQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGF 109 + QL PGK ++ + + R T + L P+ P + + Sbjct: 4 LHERVVQLEPGKDALKYILATGRESVIIRISTLPLVTAERLTSPDWITIIYPLSWAREYL 63 Query: 110 IGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQ 169 + + + G F +S+ + + L + L D L + Sbjct: 64 LNGHECETGHLYLFQGPNGF-ISSARQRDSITIGLRRQRLIATCASLLGVDTEDIALDDA 122 Query: 170 SALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVT 229 +++ + + L+T Q + L +L + +L Sbjct: 123 -VVKLPAAIDQFFRQSLCKVLSTPDYTTRQYGQVTMPAALEADLYAMIAGVLAPCVFPEL 181 Query: 230 AESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWL 289 + +S + L E++ N ++ DLC + L F +LG P +L Sbjct: 182 KGRMGQRSSLKSLRCVSEFIDLNGCANLSTADLCRVAKLEYSRLHAVFDEVLGTSPYKYL 241 Query: 290 KRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 + RL+ RR L+ + ++KD A+ G+ G+FA Y+ +F E PS T+ + + Sbjct: 242 QSARLSEARRLLLDDRNPPKSIKDVALSLGYMKSGRFAEQYRDMFDELPSETMARANQ 299 >UniRef50_B0T4V7 Transcriptional regulator, AraC family n=2 Tax=Caulobacter RepID=B0T4V7_CAUSK Length = 303 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 81/261 (31%), Gaps = 20/261 (7%) Query: 98 FGIPATRGEQGFIGSQCLGSAEIATRPG-------GTEFELSTPDDYTILGVVLSEDVIT 150 + A ++ G L + G + S + Y + L VI Sbjct: 48 VCVVAQGRKKVLAGGSVLVYDAMHYLVASVDLPVIGQVVDASPEEPYLCFRMTLDPAVIG 107 Query: 151 RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQ-ALATFCENPENLHQPAVRKVL 209 L + + A V L + P +L Sbjct: 108 DLLLQLGGEPALAQ--------DAGPLVGAMAVSQVNPPLLDAVMRMVRLIDTPRDAAIL 159 Query: 210 GDNLLMAMG-AMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHV 268 + + ML Q A+ R + RA ++ +N +P ++ DL + + Sbjct: 160 APLIEREILYRMLLGDQGPRLAQIARADGRMRQVKRAIGWIQQNFDQPFSIEDLAAEARM 219 Query: 269 SRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFAT 328 S L F A+ + P + K+IRL R+ ++ + + A G+ QF+ Sbjct: 220 SPSALHRHFKAVTALSPLQYQKQIRLQEARKLILVQRLDAGS---AGHAVGYDSASQFSR 276 Query: 329 DYQQLFSEKPSLTLHQRMREW 349 +Y +LF P + Sbjct: 277 EYARLFGAPPLRDAARLRSRP 297 >UniRef50_C3X2I3 Transcriptional regulator n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X2I3_OXAFO Length = 304 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 102/290 (35%), Gaps = 31/290 (10%) Query: 68 EILLDDIQVFREYTGLALRQSCLVWPNSFW---FGIPATRGEQGFIGSQCLGS------- 117 + ++ +FR R C V + F+ G+ ++ +GSQ Sbjct: 31 QTPIEGFSLFR-------RDDCDVCDSCFYEPAVGVVIQGKKRSVVGSQEYHYRENDSLL 83 Query: 118 AEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQ 177 + + + LG+ + + ++ + + L P + L V Sbjct: 84 NSVDLPSKNYILDAGPEKPFLGLGLKIDKYMVGQLISEL--PHLSQNSDEPVRGLSVTPI 141 Query: 178 HKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESI-SHQ 236 L F E L P VL ++ + L +I + Sbjct: 142 E--------ADLLDAFLRLTELLDNPEQIPVLAPMIVREIHYRLLVGPRGRFLRAINTAG 193 Query: 237 SYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNA 296 S +++ ++ N EP+ V +L + +++ T F I + P + KR+RL Sbjct: 194 SQGNRIAQVISWLRNNYKEPLQVDELARKANMATSTFHRHFKQITTLSPLQYQKRLRLYE 253 Query: 297 VRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 +R ++ + A + G+ QF +Y++LF E PS +H+ Sbjct: 254 AQRLMLVENEYAAN---ACLAVGYESPTQFNREYKRLFGEPPSRNIHKVR 300 >UniRef50_A6GLD5 Transcriptional regulator, AraC family protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GLD5_9BURK Length = 290 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 94/275 (34%), Gaps = 14/275 (5%) Query: 66 FTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPG 125 ++E L + R AL + ++ S I T+ + Sbjct: 14 YSESALSGVTFMR--CNGALARMPALYEPSIVIVIQGTKHGFHDGNIYTYDANHYLVVSV 71 Query: 126 GTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGF 185 F++ T + ++ L + +S ++ E Sbjct: 72 PLPFDVETQA-------TAEKPLLGLIIRVDFEMAAELLLDLKESVVDQGEAVPPLFASR 124 Query: 186 VQQAL-ATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAE-SISHQSYRRLLS 243 + L + E L P +VLG +++ + + + + + S SY ++ Sbjct: 125 MDAKLGDSVFRLLEILQSPTESRVLGSSVIKEITYRVLTGEQGRSLRLAFSSDSYLSRVA 184 Query: 244 RAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELIS 303 + + + N + V L + ++S T F ++ P ++K IRL+ R +I Sbjct: 185 KVLKLIHSNYHCALDVATLAQEANMSVPTFHAHFKSVTSSTPIQYIKAIRLHQARLMMIR 244 Query: 304 PWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKP 338 + ++ + G+ QF+ ++++ F P Sbjct: 245 ---KGISAAQVSAMVGYESPSQFSREFKRYFGRTP 276 >UniRef50_B2J894 Transcriptional regulator, AraC family n=6 Tax=Bacteria RepID=B2J894_NOSP7 Length = 326 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 42/281 (14%), Positives = 94/281 (33%), Gaps = 12/281 (4%) Query: 70 LLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEF 129 L + R + S + F A ++ +GS+ + E Sbjct: 50 PLKGLHFNRSSSPSECVHSVSIP----AFCAIAQGSKEVLLGSERYQYDPMHYLLATVEL 105 Query: 130 ELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQA 189 P IL ++ ++ + + + + + + + Sbjct: 106 ----PIVSQILEASKAQPYLSLRLDLDPTLVGSVMVEAGYPSRRRADVKAIDVSPLNANL 161 Query: 190 LATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESIS-HQSYRRLLSRAREY 248 L L PA VL + + L + I+ Y ++RA E Sbjct: 162 LDAVVRLVRLLDSPAEAHVLAPLIKREIIYRLLMGEQGNRLRHIAVLGGYTYHIARAVER 221 Query: 249 VLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQS 308 + ++ +EP+ + + +L +S + F ++ + P + K++RL RR ++ + Sbjct: 222 LRKDFNEPIKIESIARELGMSVSGFHHHFKSVTAMSPLQYQKQLRLQEARRLML---GEK 278 Query: 309 MTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREW 349 + AA + G+ F +Y++LF P + + Sbjct: 279 LDATSAAYRVGYDDASHFNREYKRLFGAPPMRDVERLREAA 319 >UniRef50_A6F2M7 Transcriptional regulator, AraC family protein n=1 Tax=Marinobacter algicola DG893 RepID=A6F2M7_9ALTE Length = 310 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 46/275 (16%), Positives = 89/275 (32%), Gaps = 13/275 (4%) Query: 68 EILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGT 127 E +D ++V R ++ F I + +G + Sbjct: 34 ESAIDGLRVTRALEPSGTIRALY----QTSFCIVLQGAKVTAVGESAFHYRQGECLLAS- 88 Query: 128 EFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQ 187 ++ P + I+ + + + L + + A +Q + G Sbjct: 89 ---VNVPVNSRIVQATSDKPYLALSLSIDPAMISELLVTHPEMAYRCPKQPALSTAGMPD 145 Query: 188 QALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESIS-HQSYRRLLSRAR 246 + L QP R+VL + + + + + + S + R Sbjct: 146 ELYDPVIRLLRLLDQPDDREVLEPLVRREICWRVLRSPLGPALQQVGLKDSDTARIGRVT 205 Query: 247 EYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWS 306 ++ N +P V +L +S T F +I + P + K +RL RR L+S Sbjct: 206 AWMQANYQQPFRVAELAAMASMSPATFHRHFKSITRLTPVQFQKLVRLQEARRLLLSDQE 265 Query: 307 QSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLT 341 V + G+ QF+ DY++LF P Sbjct: 266 ----VASIGYRVGYESPSQFSRDYRKLFGAPPGRD 296 >UniRef50_B9BG93 Transcriptional activator FeaR n=1 Tax=Burkholderia multivorans CGD1 RepID=B9BG93_9BURK Length = 330 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 39/306 (12%), Positives = 96/306 (31%), Gaps = 25/306 (8%) Query: 51 QQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQ-SCLVWPNSFWFGIPATRGEQGF 109 ++ + F G T + + R ++ + + + + Sbjct: 38 SCEFEPIGTTPFSGSITCGAVGAARFARVAATPSVYRGQPRLGSDIAPLFVALQTHGDSL 97 Query: 110 IGS--QCLG--SAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHM 165 +G + + E F +S+ ++ V + P + Sbjct: 98 LGDGVRQIRLLPGEWTVFDARCPFTISSQHCMELIFVNVPG----------LIPAQPPRQ 147 Query: 166 LRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQ 225 E +A + + EN+ + +LL + + Q Sbjct: 148 PLIYPTFEPSGTSGSA--RMFSDLVVSLFRELENVDSNIAISSV--DLLRNLFSDAFRIQ 203 Query: 226 PMVTAESISHQSYRRLLSRAREYVLENMSEP-VTVLDLCNQLHVSRRTLQNAFHAILGIG 284 A+ + Q +++ E++S+P ++ + + L +S R + F Sbjct: 204 CPWPAQPLETQR-----RAVLQFIEEHLSDPELSPPSIASALGMSIRQVHRLFKRAGSQT 258 Query: 285 PNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQ 344 ++ + R+ EL S + +++V A +WGF F+ +++ PS Sbjct: 259 VGEYIWKRRIQRCSEELRSGANAALSVTTIAFRWGFSSSPHFSRAFKKEMGMTPSEYRRN 318 Query: 345 RMREWG 350 + + G Sbjct: 319 FLTDPG 324 >UniRef50_B8DKQ8 Transcriptional regulator, AraC family n=2 Tax=Desulfovibrio RepID=B8DKQ8_DESVM Length = 292 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 48/282 (17%), Positives = 101/282 (35%), Gaps = 22/282 (7%) Query: 67 TEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGG 126 TE L + ++R T ++ ++ L++ + G + + Sbjct: 18 TETGLPGVGLYR--TSGSIHRTPLLYQQGLIIL--GQGAKLVHFGGRVYQYDQDHYLALS 73 Query: 127 TEFELSTPD------DYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEV-KEQHK 179 L V + V+ + + + + + + + + Sbjct: 74 VPIAAECEAVATPEKPLLSLVVDIDLGVLNQLIGQIEDRIDYRSLTQGCTHQGLFLAKAD 133 Query: 180 AALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYR 239 AA VQ+ L P +VLG L+ + + + +++ ++ Sbjct: 134 AAFRNTVQRLLLAL-------SCPLEAQVLGPGLVRELLFRVLCGENAAALHALATKNTN 186 Query: 240 -RLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVR 298 + +A + + N SEP V L +++S T AF + P +LKR+RLN R Sbjct: 187 MSRIEKALKQIHGNFSEPFNVDQLAGFVNMSPSTFHRAFKDVTAFSPIQYLKRVRLNKAR 246 Query: 299 RELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSL 340 L ++ +AA G+ + QF+ ++++ F PS Sbjct: 247 SLLREDGVRA---SEAARMVGYESVSQFSREFRRYFGISPSH 285 >UniRef50_A1B7B0 Transcriptional regulator, AraC family n=9 Tax=Alphaproteobacteria RepID=A1B7B0_PARDP Length = 317 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 38/286 (13%), Positives = 80/286 (27%), Gaps = 13/286 (4%) Query: 63 HGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIAT 122 E ++ + + + + A + +G + Sbjct: 36 QAHGRETPIEGLVLTSVTAPTGPIHAVYRPS----LCVVAQGAKTSMLGERAYRYDAGKC 91 Query: 123 RPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAAL 182 + P I + L +L + A+ Sbjct: 92 LIAS----MEVPIRAEITRATPDRPYLAFSLA-LDPATISDLLLERDGTDDAPAGAALAV 146 Query: 183 WGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYR-RL 241 F + C +P +L + + +L I Sbjct: 147 HAFGPELADPLCRLLALCDRPRDIAILAPLVRREITWLLLNGPMGPALRQIGLAGSPMAR 206 Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 ++RA + E ++ + + L + +S T F A+ + P + K++RL RR L Sbjct: 207 IARAIACIREGFADKLNIRQLADVAGMSPATFHRHFKAVTAMTPVQYQKQLRLQEARRLL 266 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 + + V G+ QF+ +Y++LF P + R Sbjct: 267 LFDNAD---VARIGYAIGYESPSQFSREYRRLFGSPPGRDGQEIRR 309 >UniRef50_Q880S7 Transcriptional regulator, AraC family n=2 Tax=Pseudomonas syringae pv. tomato RepID=Q880S7_PSESM Length = 313 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 85/262 (32%), Gaps = 22/262 (8%) Query: 97 WFGIPATRGEQGFIGSQC--LGSAEIATRPGGTEFELSTPDDYTI-----LGVVLSEDVI 149 I ++ G Q + + L ++ Sbjct: 62 CVAIILQGAKEITFGEQACEFAQGSFFVTSVDIPTLARVTAASEQTPYLSIVLKLDLSML 121 Query: 150 TRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVL 209 + E A + L F QP ++ Sbjct: 122 NDVIQTQAPLKQE----------ATPEARGFASGMASSEMLDAFARLSALTGQPLEAGLM 171 Query: 210 GDNLLMAMGAMLEEAQPMVTAESISHQSYRRL-LSRAREYVLENMSEPVTVLDLCNQLHV 268 D + + L + S++ YR + RA E++ + EP+ V L + Sbjct: 172 SDLIKREICVRLLLSCAGQWLRSVTRDGYRDKGIVRAIEWLKLHYDEPLHVAQLAQLSGM 231 Query: 269 SRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFAT 328 + TL + F + G P + K +RL A R +++ + + V AA++ G+ + QF+ Sbjct: 232 ASSTLHHNFRKLTGTSPVQYQKSLRLQAARSLMLT---ERVDVNTAALRVGYESVAQFSR 288 Query: 329 DYQQLFSEKPSLTLHQRMREWG 350 +Y + F PS + + RE G Sbjct: 289 EYARRFGAPPSRDI-KYAREAG 309 >UniRef50_B1Q2A8 Transcriptional activator for nphA1A2 n=4 Tax=Nocardiaceae RepID=B1Q2A8_9NOCA Length = 335 Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 100/295 (33%), Gaps = 26/295 (8%) Query: 61 KFHGEFTEILLDDIQV--FREYTGLALRQSCLVWPNS---FWFGIPATRGEQGFIGSQC- 114 F E+ D+ V R +R ++ +S + + + + Sbjct: 56 HFDAEWGGRPFGDLHVSTIRADAHTVVRSPAMIQSDSGEGYLVCLVTDGSVEVRQSGRAT 115 Query: 115 -LGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALE 173 + A F +P + + V +V+T + P R++ + Sbjct: 116 VVEPGSFALLDCAAPFVFHSPAPFRQVVVRSPREVLTSRL-----PGRIV-----EHGTA 165 Query: 174 VKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESI 233 G V + + + Q A + + + L E +A + Sbjct: 166 RSIHGDTGAGGLVGRLFVDIADMDAPMSQGAAVS-FASSAVDMLATALTEGLLATSAADL 224 Query: 234 SHQSYRRLLSRAREYVLENMSE-PVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRI 292 + R + +N+ + +T+ D+ +S RT+ F+A G AWL + Sbjct: 225 HRTEDLTRVQRV---IEQNLHDADITLSDIAAAAGMSLRTVHKLFNAE-GTTTRAWLYQA 280 Query: 293 RLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMR 347 RL A RR L++ ++V D + GF + F+ ++ F P L + R Sbjct: 281 RLEAARRYLLTTD---LSVADVSECAGFRDVSHFSRLFRSTFGSSPGLYRKEHAR 332 >UniRef50_A4Q9T5 Putative uncharacterized protein n=1 Tax=Corynebacterium glutamicum R RepID=A4Q9T5_CORGB Length = 308 Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 103/318 (32%), Gaps = 33/318 (10%) Query: 43 HALTITAWQQ-------IYDQLHPGK-FHGEFTEILLDDIQVFREYTGLALRQS----CL 90 A T W+Q P F + DI++F T Sbjct: 5 QAYNFTQWRQIVASSFHNVRAAAPAPNFRATAHHKHVGDIELFDMITDPHTVIHTEGDGS 64 Query: 91 VWPNSFW-FGIPATRGEQGFIGSQ--CLGSAEIATRPGGTEFELSTPDDYTILGVVLSED 147 ++ F + + + ++A G + L + L V Sbjct: 65 FPLSTMCKFSLQLEGVATLVQDGRSCTMSPGDLALYTGKRPYHLVFDEPQRSLVVYFPRS 124 Query: 148 VITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRK 207 ++ + + + L + F N ++L + Sbjct: 125 LLQLRDDQI------------DMITATPISRDEGLGKIIIPLFEQFARNLDDLQGLHAQS 172 Query: 208 VLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSE-PVTVLDLCNQL 266 ++ +L + + E + M + +L RA Y+ EN+ + + + + L Sbjct: 173 LIRASLDLLVTVFAEHTERMNG----ELEDSSQLFRRATSYIDENLHDLDLAPGTIADAL 228 Query: 267 HVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQF 326 +VS R L F + G+ +A+++ RLNA+ +L +P + T++ + + G Sbjct: 229 YVSVRNLHAHFSSQ-GLTVSAYIRARRLNAIHADLGNPQMRDFTIQSISARHGLVDASYV 287 Query: 327 ATDYQQLFSEKPSLTLHQ 344 + ++ + E P + Sbjct: 288 SKAFRAEYGESPRTYRTR 305 >UniRef50_B4WDX1 AraC-type transcriptional regulator N-terminus domain protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WDX1_9CAUL Length = 302 Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 87/285 (30%), Gaps = 21/285 (7%) Query: 66 FTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCL--GSAEIATR 123 + + ++++ + + + G+Q +G + + Sbjct: 21 LSRSAVPGLRLYGSDAPTRMVSVGYEP----MLCLVVSGGKQTILGETVYSYRAGDCLVV 76 Query: 124 PGGTEFELST-PDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAAL 182 S Y L L+ I + P + + Sbjct: 77 SAELPVCGSIIEAPYRALSFDLNPATIAGLMVEIGAPAAS----------DPSPPSGIHV 126 Query: 183 WGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESI-SHQSYRRL 241 + L L +P V+ + + L ++ T I S +S Sbjct: 127 TQLEDELLEPMARLLRLLDRPHEIAVMTPMIERELVWRLLHSRHAATVRQIGSAESRLSG 186 Query: 242 LSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRREL 301 +SRA ++ + +EP+ + L + +S T F + + P + K++RL R L Sbjct: 187 VSRAINWIRAHYAEPMRLEALSDLAGMSLSTFHRHFRTVTTMSPLQFQKQVRLQQARARL 246 Query: 302 ISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 +S + + G+ QF+ +Y + F P + Sbjct: 247 LSGADGA---AETGFAVGYDSPSQFSREYARQFGMPPGRDAARMR 288 >UniRef50_A6UG08 AraC-type transcriptional regulator domain protein n=2 Tax=Sinorhizobium RepID=A6UG08_SINMW Length = 318 Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 45/294 (15%), Positives = 96/294 (32%), Gaps = 13/294 (4%) Query: 52 QIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIG 111 QI D+L + G E + + ++R V+ S F I ++ + Sbjct: 21 QILDRLSKLPWDGLSFEHPIPGLSLYRII--QPAGPFSSVYEPSLSFIIKGSKNVRVGNE 78 Query: 112 SQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANF-LHNPDRVLHMLRNQS 170 + G P I E + + R++ Sbjct: 79 TMVYDEGCFFLTAIG------LPVTGQICAASEREPYVAAALRLDMEKVRRIIADHDIHP 132 Query: 171 ALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTA 230 + A+ + PA L ++ + L + Sbjct: 133 TDLPERDLGVAVGTATCELFDALFRLISLAGAPADIPFLAGHIQNEIIYRLLTGEQGARL 192 Query: 231 ESIS-HQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWL 289 + + +++A ++ EN ++ + V +L ++ TL + F A+ + P + Sbjct: 193 RRFALAGTNSNRVAKAVAWLKENYTKQLRVEELAEIANMGVSTLHHHFRAMTAMSPLQFQ 252 Query: 290 KRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLH 343 K +RL+ R ++S + T AA++ G+ QF +Y++ F P + Sbjct: 253 KHLRLHHARELMLSQSLDAAT---AALRVGYESPTQFNREYRRAFGHPPLRDIR 303 >UniRef50_Q5YXZ9 Putative transcriptional regulator n=1 Tax=Nocardia farcinica RepID=Q5YXZ9_NOCFA Length = 334 Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 49/302 (16%), Positives = 97/302 (32%), Gaps = 26/302 (8%) Query: 55 DQLHPGKFHGEFTEILLDDIQVFRE-----YTGLALRQSCLVWPNSFWFGIPATRGEQGF 109 L F G + + +Q+ R P G+ Sbjct: 33 TPLTAAGFDGTLSCHEVGSLQLNEVGGGPVRVERDPRAIRRADPGYIKLGLQTRGRGAVV 92 Query: 110 IGSQC--LGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLR 167 + LG ++A G + L + ++ + + +A L Sbjct: 93 QDGRTAVLGPGDLAVYDTGRPYTLHFDQPFQMIVAMFPRESWQIRAAELTEI-------- 144 Query: 168 NQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPM 227 + + A L F++ AT + + D +L + A + E + Sbjct: 145 TARRIGGRGGVGALLAPFLRAIPATLACGDLSRDI-----HIADAVLDLLTAAVTEFGGV 199 Query: 228 VTAESISHQSYRRLLSRAREYVLENMSEP-VTVLDLCNQLHVSRRTLQNAFHAILGIGPN 286 + LL + + ++ ++++P ++V D+ H+S R LQ F G Sbjct: 200 EERARSAGAG---LLVQVKAFIDAHLADPMLSVPDIAAAHHISVRYLQRLFETE-GTTVT 255 Query: 287 AWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRM 346 W+++ RL +RR+L P T A +WG F+ ++ + P Sbjct: 256 TWIRQRRLERIRRDLADPRIDRST-SAVAARWGLADASHFSKLFKAAYGMTPRQYRLAAS 314 Query: 347 RE 348 R Sbjct: 315 RP 316 >UniRef50_Q08YF3 Transcriptional regulator, AraC family n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08YF3_STIAU Length = 336 Score = 144 bits (364), Expect = 3e-33, Method: Composition-based stats. Identities = 53/314 (16%), Positives = 110/314 (35%), Gaps = 22/314 (7%) Query: 38 TDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFW 97 +D + + + P GE T I + + + R G + Q ++ P Sbjct: 31 SDADTQ-ELLARLTAQFLRRTPS--DGETTTI-VPGLTLMRLS-GPTVVQRGMLKP---S 82 Query: 98 FGIPATRGEQGFIGSQCLGSAEIATRPGGTEF--ELSTPDDYTILGVVLSEDVITRQANF 155 F + A + G G+ G ++ P +L + + Sbjct: 83 FCVVAQGEKIG-----QAGADTTIRYSAGQFLASSINMPVAGQVLHASKARPYLAAVF-E 136 Query: 156 LHNPDRVLHMLRNQSALEVKEQ--HKAALWGFVQQALATFCENPENLHQPAVRKVLGDNL 213 L D + + + ++ + + L + +L + L Sbjct: 137 LCPADVLSVLADAKIQVDATAPCCPATFVGTADARLLDVVLRSVSSLDDEREARFFAPLL 196 Query: 214 LMAMGAMLEEAQPMVTAESISHQSYRR-LLSRAREYVLENMSEPVTVLDLCNQLHVSRRT 272 + L + QS + RA E++ + ++P+ + +L +++S + Sbjct: 197 RRELIYRLVTGPSAFAVAQSALQSRPDDGVGRAVEWIKTHFAQPLVIDELAKHVNMSTSS 256 Query: 273 LQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQ 332 L + F A + +GP + KR+RL RR L+S + + AA G+ QF +Y++ Sbjct: 257 LHHKFKATVMMGPLQYQKRLRLEEARRLLLSGLADA---TRAAFDVGYESPSQFIREYRR 313 Query: 333 LFSEKPSLTLHQRM 346 LF P + + Sbjct: 314 LFGTSPMRDVKRMR 327 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.144 0.400 Lambda K H 0.267 0.0444 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,229,858,447 Number of Sequences: 3077464 Number of extensions: 119224049 Number of successful extensions: 414929 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 13934 Number of HSP's successfully gapped in prelim test: 3884 Number of HSP's that attempted gapping in prelim test: 364464 Number of HSP's gapped (non-prelim): 25512 length of query: 350 length of database: 1,040,396,356 effective HSP length: 129 effective length of query: 221 effective length of database: 643,403,500 effective search space: 142192173500 effective search space used: 142192173500 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 94 (40.7 bits)