BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (312 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P52662 HTH-type transcriptional regulator pecT n=151 Ta... 410 e-113 UniRef50_C5BE75 HTH-type transcriptional regulator PecT n=26 Tax... 300 6e-80 UniRef50_D0ZAY7 Transcriptional regulator, LysR family n=3 Tax=E... 298 1e-79 UniRef50_C1DFD4 Transcriptional regulator, LysR family n=4 Tax=P... 254 3e-66 UniRef50_C6BGY1 Transcriptional regulator, LysR family n=2 Tax=R... 240 4e-62 UniRef50_A1WQD6 Transcriptional regulator, LysR family n=12 Tax=... 233 7e-60 UniRef50_Q0K9T5 Transcriptional regulator, LysR family n=2 Tax=B... 218 2e-55 UniRef50_Q7WCR5 Probable LysR-family transcriptional regulator n... 211 2e-53 UniRef50_A3JCT6 Transcriptional regulator, LysR family protein n... 209 1e-52 UniRef50_A6W298 Transcriptional regulator, LysR family n=2 Tax=P... 184 4e-45 UniRef50_Q390C5 Transcriptional regulator, LysR family n=7 Tax=B... 172 2e-41 UniRef50_C7C7Z1 Transcriptional regulator, LysR family n=4 Tax=A... 166 9e-40 UniRef50_Q0FXE0 Probable transcriptional regulator n=1 Tax=Fulvi... 164 4e-39 UniRef50_A4SIM7 Transcriptional regulator, LysR family n=3 Tax=G... 162 1e-38 UniRef50_B1LS77 Transcriptional regulator, LysR family n=2 Tax=P... 161 2e-38 UniRef50_Q4K8T2 Transcriptional regulator, LysR family n=16 Tax=... 160 4e-38 UniRef50_B2IEY6 Transcriptional regulator, LysR family n=1 Tax=B... 159 1e-37 UniRef50_B9K1U5 Transcriptional regulator LysR family n=59 Tax=A... 158 2e-37 UniRef50_A6FDC4 Putative uncharacterized protein n=1 Tax=Moritel... 158 3e-37 UniRef50_B7L193 Transcriptional regulator, LysR family n=3 Tax=R... 157 5e-37 UniRef50_C5A914 Regulatory protein n=2 Tax=Burkholderia RepID=C5... 156 9e-37 UniRef50_Q4ZQB6 Regulatory protein, LysR:LysR, substrate-binding... 155 1e-36 UniRef50_C8X2B4 Transcriptional regulator, LysR family n=1 Tax=D... 155 2e-36 UniRef50_A0NUY3 Transcriptional regulator n=1 Tax=Labrenzia aggr... 154 3e-36 UniRef50_C0QAW4 HTH-type transcriptional regulator (LysR family ... 154 5e-36 UniRef50_B9JGF1 Transcriptional regulator protein n=57 Tax=Rhizo... 154 5e-36 UniRef50_A3YDA6 Transcriptional regulatory protein n=1 Tax=Marin... 152 1e-35 UniRef50_Q07MM7 Transcriptional regulator, LysR family n=1 Tax=R... 152 2e-35 UniRef50_A9IU06 Transcriptional regulator, LysR-family n=23 Tax=... 152 2e-35 UniRef50_A8ILZ3 Transcriptional regulator n=2 Tax=Xanthobacterac... 151 3e-35 UniRef50_B1LTB4 Transcriptional regulator, LysR family n=4 Tax=A... 150 5e-35 UniRef50_C4X8P7 NADH dehydrogenase transcriptional regulator n=9... 150 5e-35 UniRef50_Q1R159 Transcriptional regulator, LysR family n=3 Tax=P... 150 7e-35 UniRef50_Q1ZUY1 Transcriptional regulator n=3 Tax=Vibrionaceae R... 149 1e-34 UniRef50_A8TVM4 Transcriptional regulator, LysR family protein n... 148 2e-34 UniRef50_A5ED63 Transcriptional regulator, LysR family n=1 Tax=B... 147 3e-34 UniRef50_Q2SFI4 Transcriptional regulator n=1 Tax=Hahella chejue... 147 3e-34 UniRef50_Q13P59 Transcriptional regulator, LysR family n=8 Tax=P... 146 1e-33 UniRef50_A5V9A5 Transcriptional regulator, LysR family n=3 Tax=A... 145 2e-33 UniRef50_Q1YP17 Transcriptional regulator, LysR family protein n... 145 3e-33 UniRef50_A9BYU9 Transcriptional regulator, LysR family n=22 Tax=... 144 3e-33 UniRef50_B6R8G3 Transcriptional regulator n=2 Tax=Rhodobacterace... 144 3e-33 UniRef50_A0NRR7 Transcriptional regulator, LysR family protein n... 144 3e-33 UniRef50_A4TW42 LysR-family transcriptional regulator n=1 Tax=Ma... 144 4e-33 UniRef50_C5B683 Transcriptional regulator, LysR family n=6 Tax=M... 144 4e-33 UniRef50_B3QIV6 Transcriptional regulator, LysR family n=4 Tax=R... 144 5e-33 UniRef50_Q98HR2 Transcriptional regulator n=1 Tax=Mesorhizobium ... 143 7e-33 UniRef50_D0IY48 Transcriptional regulator, LysR family n=22 Tax=... 143 8e-33 UniRef50_D0RZH8 Transcriptional regulator n=1 Tax=Acinetobacter ... 143 8e-33 UniRef50_Q07TP5 Transcriptional regulator, LysR family n=10 Tax=... 142 1e-32 UniRef50_A8LQJ4 HTH-type transcriptional regulator n=5 Tax=Rhodo... 142 1e-32 UniRef50_A6UAC5 Transcriptional regulator, LysR family n=5 Tax=R... 142 1e-32 UniRef50_B4E965 LysR family regulatory protein n=19 Tax=Proteoba... 142 2e-32 UniRef50_Q317K8 Transcriptional regulator, LysR family n=1 Tax=D... 139 1e-31 UniRef50_Q141J0 Transcriptional regulator, LysR family n=7 Tax=B... 139 2e-31 UniRef50_A3YH31 Transcriptional regulator, LysR family protein n... 138 2e-31 UniRef50_A5IA94 Transcriptional regulator, LysR family n=6 Tax=B... 138 3e-31 UniRef50_A9DC03 Transcriptional regulator, LysR family protein n... 138 3e-31 UniRef50_B1J9W8 Transcriptional regulator, LysR family n=38 Tax=... 137 3e-31 UniRef50_B8H5P5 Transcriptional regulator, LysR family protein n... 137 5e-31 UniRef50_B0FL86 Putative LysR family transcriptional regulator n... 136 9e-31 UniRef50_C3KKD9 Putative LysR family transcriptional regulator n... 136 9e-31 UniRef50_P16931 HTH-type transcriptional regulator dgdR n=16 Tax... 136 9e-31 UniRef50_C5BWR0 Transcriptional regulator, LysR family n=1 Tax=B... 136 9e-31 UniRef50_Q2SMF3 Transcriptional regulator n=1 Tax=Hahella chejue... 136 1e-30 UniRef50_B1KPF3 Transcriptional regulator, LysR family n=2 Tax=G... 135 1e-30 UniRef50_Q11NC7 Transcriptional regulator, LysR family n=3 Tax=P... 135 2e-30 UniRef50_Q5FRD9 Transcriptional regulator, LysR family n=1 Tax=G... 135 2e-30 UniRef50_A4XSC8 Transcriptional regulator, LysR family n=7 Tax=P... 134 3e-30 UniRef50_Q1QUX8 Transcriptional regulator, LysR family n=1 Tax=C... 134 4e-30 UniRef50_A0KR40 Transcriptional regulator n=5 Tax=Gammaproteobac... 134 4e-30 UniRef50_A1WMH7 Transcriptional regulator, LysR family n=1 Tax=V... 134 5e-30 UniRef50_A1B7H3 Transcriptional regulator, LysR family n=1 Tax=P... 134 6e-30 UniRef50_C1SL97 Transcriptional regulator, COG0583 n=1 Tax=Denit... 133 8e-30 UniRef50_A8G7X5 Transcriptional regulator, LysR family n=1 Tax=S... 133 8e-30 UniRef50_Q7W0I5 Probable LysR-family transcriptional regulator n... 132 1e-29 UniRef50_B5ZG57 Transcriptional regulator, LysR family n=2 Tax=G... 132 1e-29 UniRef50_B1YYS6 Transcriptional regulator, LysR family n=41 Tax=... 132 1e-29 UniRef50_B4EPV1 LysR family regulatory protein n=7 Tax=Burkholde... 132 2e-29 UniRef50_A1S908 Putative LysR-family transcriptional regulator n... 131 3e-29 UniRef50_C5CP23 Transcriptional regulator, LysR family n=4 Tax=P... 130 6e-29 UniRef50_C6AY75 Transcriptional regulator, LysR family n=3 Tax=P... 130 8e-29 UniRef50_Q0BQ99 Transcriptional regulators, LysR family n=1 Tax=... 130 8e-29 UniRef50_B9R5T3 LysR substrate binding domain protein n=1 Tax=La... 130 9e-29 UniRef50_A3Y8R3 Putative uncharacterized protein n=1 Tax=Marinom... 129 1e-28 UniRef50_UPI0001B5968A HTH-type transcriptional regulator pecT n... 128 2e-28 UniRef50_Q48I21 Transcriptional regulator, LysR family n=4 Tax=P... 128 2e-28 UniRef50_B9JX79 Transcriptional regulator LysR family n=1 Tax=Ag... 127 4e-28 UniRef50_B0UBR3 Transcriptional regulator, LysR family n=1 Tax=M... 127 4e-28 UniRef50_B9JHY5 Transcriptional regulator protein n=2 Tax=Agroba... 127 4e-28 UniRef50_A4YNE0 Putative transriptional regulatory protein, LysR... 127 5e-28 UniRef50_Q3JTX1 Transcriptional regulator, LysR family n=37 Tax=... 127 6e-28 UniRef50_A3VR51 Probable transcriptional regulator n=1 Tax=Parvu... 126 8e-28 UniRef50_Q28WA0 Transcriptional regulator, LysR family n=1 Tax=J... 126 9e-28 UniRef50_A1B0T7 Transcriptional regulator, LysR family n=1 Tax=P... 126 9e-28 UniRef50_Q4KF30 Transcriptional regulator, LysR family n=5 Tax=P... 126 9e-28 UniRef50_UPI000197C29B LysR family transcriptional regulator n=1... 126 1e-27 UniRef50_D1RXQ6 Transcriptional regulatory protein n=1 Tax=Serra... 126 1e-27 UniRef50_Q0B2N7 Transcriptional regulator, LysR family n=9 Tax=B... 126 1e-27 UniRef50_A3XB80 Transcriptional regulatory protein, LysR family ... 125 1e-27 UniRef50_UPI0001907537 probable transcriptional regulator protei... 125 1e-27 UniRef50_A0NXC5 Transcriptional regulator, LysR family protein n... 125 2e-27 UniRef50_C6BUP0 Transcriptional regulator, LysR family n=1 Tax=D... 124 4e-27 UniRef50_B2IKY9 Transcriptional regulator, LysR family n=1 Tax=B... 124 4e-27 UniRef50_Q0G3C9 Transcriptional regulator, LysR family protein n... 124 5e-27 UniRef50_A6UCU7 Transcriptional regulator, LysR family n=12 Tax=... 124 5e-27 UniRef50_B9Z2V3 Transcriptional regulator, LysR family n=1 Tax=L... 124 6e-27 UniRef50_C7HXZ5 Transcriptional regulator, LysR family n=1 Tax=T... 123 1e-26 UniRef50_Q2BIB7 Probable transcription regulator protein n=1 Tax... 123 1e-26 UniRef50_UPI0001AEBA54 LysR family transcriptional regulator n=1... 122 1e-26 UniRef50_A6VSC2 Transcriptional regulator, LysR family n=1 Tax=M... 122 1e-26 UniRef50_A9WT18 Transcriptional regulator, LysR family n=8 Tax=A... 122 2e-26 UniRef50_A6UJN8 Transcriptional regulator, LysR family n=5 Tax=A... 122 2e-26 UniRef50_Q1LFN3 Transcriptional regulator, LysR family n=15 Tax=... 122 2e-26 UniRef50_A6VRV6 Transcriptional regulator, LysR family n=1 Tax=M... 122 2e-26 UniRef50_Q2C715 Transcriptional regulator n=2 Tax=Photobacterium... 121 3e-26 UniRef50_Q7W0V6 Putative lysR-family transcriptional regulator n... 121 4e-26 UniRef50_Q7WAP6 Putative lysR-family transcriptional regulator n... 120 5e-26 UniRef50_A8KXK4 Transcriptional regulator, LysR family n=4 Tax=A... 120 5e-26 UniRef50_Q13GF3 Transcriptional regulator, LysR family n=1 Tax=B... 120 6e-26 UniRef50_B5WKB1 Transcriptional regulator, LysR family n=4 Tax=P... 120 7e-26 UniRef50_B2Q7A1 Putative uncharacterized protein n=1 Tax=Provide... 120 8e-26 UniRef50_A4WYH8 Transcriptional regulator n=11 Tax=Alphaproteoba... 120 9e-26 UniRef50_Q13GY4 Transcriptional regulator, LysR family n=1 Tax=B... 119 9e-26 UniRef50_A8L701 Transcriptional regulator, LysR family n=3 Tax=A... 119 1e-25 UniRef50_Q393B8 Transcriptional regulator, LysR family n=2 Tax=P... 119 2e-25 UniRef50_B8IHA3 Transcriptional regulator, LysR family n=2 Tax=M... 118 2e-25 UniRef50_Q167A0 Transcriptional regulator, LysR family, putative... 118 3e-25 UniRef50_A3JDH1 Probable transcriptional regulator n=1 Tax=Marin... 118 3e-25 UniRef50_Q7MCP0 Transcriptional regulator n=17 Tax=Vibrionales R... 118 3e-25 UniRef50_A2SCP1 Transcriptional regulator, LysR family n=1 Tax=M... 118 3e-25 UniRef50_C8Q3I4 Transcriptional regulator, LysR family n=1 Tax=P... 116 8e-25 UniRef50_A3YHF1 Putative uncharacterized protein n=1 Tax=Marinom... 116 1e-24 UniRef50_A3YEV8 Putative uncharacterized protein n=1 Tax=Marinom... 116 1e-24 UniRef50_Q13JW6 Transcriptional regulator, LysR family n=5 Tax=P... 115 1e-24 UniRef50_D1RYM9 Transcriptional regulatory protein n=1 Tax=Serra... 115 2e-24 UniRef50_A9GYT7 Transcriptional regulator n=4 Tax=Rhodobacterace... 115 2e-24 UniRef50_B2JVD1 Transcriptional regulator, LysR family n=1 Tax=B... 115 2e-24 UniRef50_Q1ZA42 Putative uncharacterized protein n=2 Tax=Bacteri... 115 2e-24 UniRef50_A0B0Y3 Transcriptional regulator, LysR family n=4 Tax=B... 115 3e-24 UniRef50_A0QVE3 Transcriptional regulator, LysR family protein n... 114 3e-24 UniRef50_A9CFW9 Transcriptional regulator, LysR family n=5 Tax=P... 114 5e-24 UniRef50_A6WG79 Transcriptional regulator, LysR family n=2 Tax=A... 112 2e-23 UniRef50_B2IL42 Transcriptional regulator, LysR family n=1 Tax=B... 112 2e-23 UniRef50_D1XET8 Transcriptional regulator, LysR family n=1 Tax=S... 111 4e-23 UniRef50_A5VE27 Transcriptional regulator, LysR family n=1 Tax=S... 110 5e-23 UniRef50_C1DJQ4 LysR family transcriptional regulator protein n=... 110 5e-23 UniRef50_B9YZG6 Transcriptional regulator, LysR family n=1 Tax=L... 110 9e-23 UniRef50_UPI0001904674 transcriptional regulator, LysR family pr... 109 1e-22 UniRef50_D1VDU1 Transcriptional regulator, LysR family n=2 Tax=A... 109 1e-22 UniRef50_B4EHW5 LysR family regulatory protein n=20 Tax=Proteoba... 109 2e-22 UniRef50_Q399U1 Transcriptional regulator, LysR family n=8 Tax=B... 108 2e-22 UniRef50_Q1LIS5 Transcriptional regulator, LysR family n=35 Tax=... 108 2e-22 UniRef50_C8Q8U4 Transcriptional regulator, LysR family n=1 Tax=P... 108 2e-22 UniRef50_B4E8W5 LysR family regulatory protein n=25 Tax=Burkhold... 108 3e-22 UniRef50_A0NS29 Transcriptional regulator, LysR family protein n... 107 5e-22 UniRef50_Q5QVA7 Transcriptional regulator, LysR family n=2 Tax=I... 107 5e-22 UniRef50_B7KTE5 Transcriptional regulator, LysR family n=8 Tax=R... 107 5e-22 UniRef50_C5CZ98 Transcriptional regulator, LysR family n=6 Tax=P... 107 7e-22 UniRef50_Q1LFM9 Transcriptional regulator, LysR family n=23 Tax=... 106 9e-22 UniRef50_A9BWM0 Transcriptional regulator, LysR family n=6 Tax=P... 105 1e-21 UniRef50_Q3J596 Transcriptional regulator, LysR family n=37 Tax=... 105 1e-21 UniRef50_D2LGY9 Transcriptional regulator, LysR family n=1 Tax=R... 105 2e-21 UniRef50_B6R8G5 Transcriptional regulator, LysR family n=1 Tax=P... 105 3e-21 UniRef50_B1MM13 Putative LysR-family transcriptional regulator n... 105 3e-21 UniRef50_Q1QTI0 Transcriptional regulator, LysR family n=3 Tax=P... 104 3e-21 UniRef50_Q15PU3 Transcriptional regulator, LysR family n=4 Tax=A... 104 3e-21 UniRef50_B7KZZ4 Transcriptional regulator, LysR family n=11 Tax=... 104 4e-21 UniRef50_D2L1M2 Transcriptional regulator, LysR family n=1 Tax=D... 103 6e-21 UniRef50_Q4ZVH5 Regulatory protein, LysR:LysR, substrate-binding... 102 2e-20 UniRef50_B2II45 Transcriptional regulator, LysR family n=1 Tax=B... 102 2e-20 UniRef50_C5CN69 Transcriptional regulator, LysR family n=1 Tax=V... 101 3e-20 UniRef50_A6V8U6 Probable transcriptional regulator n=6 Tax=Pseud... 100 1e-19 UniRef50_C6WIS4 Transcriptional regulator, LysR family n=1 Tax=A... 100 1e-19 UniRef50_D2B3J0 Transcriptional activator n=4 Tax=Actinomycetale... 100 1e-19 UniRef50_UPI0001905405 transcriptional regulator, LysR family pr... 99 1e-19 UniRef50_A1B0X3 Transcriptional regulator, LysR family n=11 Tax=... 99 1e-19 UniRef50_Q3IFV7 Putative bacterial regulatory protein LysR Famil... 99 2e-19 UniRef50_B7WU46 Transcriptional regulator, LysR family n=1 Tax=C... 99 2e-19 UniRef50_A9CFQ8 Transcriptional regulator, LysR family n=1 Tax=A... 99 2e-19 UniRef50_C2AP68 Transcriptional regulator, COG0583 n=1 Tax=Tsuka... 99 2e-19 UniRef50_UPI0001A44853 LysR, substrate-binding protein n=2 Tax=P... 99 2e-19 UniRef50_C0Z518 Transcriptional regulator n=3 Tax=Paenibacillace... 98 3e-19 UniRef50_B4R9P2 Transcriptional regulator, LysR family n=1 Tax=P... 97 5e-19 UniRef50_A6UC84 Transcriptional regulator, LysR family n=5 Tax=A... 97 7e-19 UniRef50_A5E9P8 Putative transcriptional regulator, LysR family ... 97 1e-18 UniRef50_B7KYH3 Transcriptional regulator, LysR family n=4 Tax=R... 96 1e-18 UniRef50_Q130S5 Transcriptional regulator, LysR family n=1 Tax=R... 96 2e-18 UniRef50_C1DEY3 Bacterial regulatory protein, LysR family n=1 Ta... 93 1e-17 UniRef50_A3JF22 Putative LysR-family transcriptional regulator n... 93 1e-17 UniRef50_A1UYL4 Transcriptional regulator, LysR family n=34 Tax=... 92 2e-17 UniRef50_B8CHE2 Regulatory protein, LysR:LysR, substrate-binding... 91 4e-17 UniRef50_Q01Z84 Transcriptional regulator, LysR family n=1 Tax=C... 91 5e-17 UniRef50_A5FXI2 Transcriptional regulator, LysR family n=22 Tax=... 91 6e-17 UniRef50_A6VRE8 Transcriptional regulator, LysR family n=1 Tax=M... 90 1e-16 UniRef50_C1F703 Transcriptional regulator, LysR family n=1 Tax=A... 90 1e-16 UniRef50_D2C3C2 Transcriptional regulator, LysR family n=1 Tax=D... 89 2e-16 UniRef50_A0LNI4 Transcriptional regulator, LysR family n=4 Tax=D... 89 3e-16 UniRef50_A0QZC3 Transcriptional regulator, LysR family protein n... 89 3e-16 UniRef50_A9KNS0 Transcriptional regulator, LysR family n=2 Tax=C... 88 3e-16 UniRef50_UPI000178A79D transcriptional regulator, LysR family n=... 88 4e-16 UniRef50_Q7P1J5 Probable transcriptional activator n=1 Tax=Chrom... 88 4e-16 UniRef50_C6Q178 Transcriptional regulator, LysR family n=1 Tax=C... 88 4e-16 UniRef50_A6F6T8 Probable transcription regulator protein n=1 Tax... 88 5e-16 UniRef50_A8LUJ1 Transcriptional regulator, LysR family n=3 Tax=R... 87 7e-16 UniRef50_P73123 Probable RuBisCO transcriptional regulator n=81 ... 86 1e-15 UniRef50_Q8Y2W8 Probable transcription regulator protein n=1 Tax... 86 2e-15 UniRef50_A6LQS5 Transcriptional regulator, LysR family n=5 Tax=C... 85 3e-15 UniRef50_B5JAQ2 LysR substrate binding domain protein n=1 Tax=Oc... 84 4e-15 UniRef50_D1REM2 Putative LysR family transcriptional regulator n... 84 6e-15 UniRef50_UPI000190E923 NADH dehydrogenase operon transcriptional... 84 6e-15 UniRef50_D0J686 Transcriptional regulator, LysR family n=1 Tax=C... 84 7e-15 UniRef50_UPI00016C47B2 transcriptional regulator, LysR family pr... 83 1e-14 UniRef50_A5N491 Transcriptional regulator n=2 Tax=Clostridium kl... 83 1e-14 UniRef50_B9Z0M9 Transcriptional regulator, LysR family n=2 Tax=B... 83 1e-14 UniRef50_C3BJ72 YwqM (Probable transcriptional regulator YwqM) n... 83 1e-14 UniRef50_A8I530 Transcriptional regulator n=1 Tax=Azorhizobium c... 82 2e-14 UniRef50_A9KJB0 Transcriptional regulator, LysR family n=4 Tax=C... 82 3e-14 UniRef50_Q1IMI0 Transcriptional regulator, LysR family n=1 Tax=C... 82 3e-14 UniRef50_A0KPQ5 Transcriptional regulator n=1 Tax=Aeromonas hydr... 82 3e-14 UniRef50_Q46QV9 Transcriptional regulator, LysR family n=4 Tax=B... 82 4e-14 UniRef50_A9ILC7 Transcriptional regulator, LysR-family n=3 Tax=B... 81 4e-14 UniRef50_B1M8N3 Transcriptional regulator, LysR family n=35 Tax=... 81 4e-14 UniRef50_Q28P74 Transcriptional regulator, LysR family n=6 Tax=R... 81 5e-14 UniRef50_B6FPK4 Putative uncharacterized protein n=1 Tax=Clostri... 81 5e-14 UniRef50_Q0FKK2 Transcriptional regulatory protein n=1 Tax=Roseo... 81 5e-14 UniRef50_A8GAF5 Transcriptional regulator, LysR family n=2 Tax=S... 81 6e-14 UniRef50_Q1IRZ3 Transcriptional regulator, LysR family n=1 Tax=C... 80 7e-14 UniRef50_C1XNG0 Transcriptional regulator, COG0583 n=2 Tax=Meiot... 80 8e-14 UniRef50_C7H9N7 Transcriptional regulator, LysR family n=2 Tax=F... 80 1e-13 UniRef50_Q218F8 Transcriptional regulator, LysR family n=12 Tax=... 80 1e-13 UniRef50_C6RKS4 Transcriptional regulator, LysR family n=2 Tax=A... 80 1e-13 UniRef50_C0CUF5 Putative uncharacterized protein n=1 Tax=Clostri... 80 1e-13 UniRef50_A8GI04 Transcriptional regulator, LysR family n=2 Tax=S... 80 1e-13 UniRef50_A3X5F2 Probable transcriptional regulator n=1 Tax=Roseo... 79 1e-13 UniRef50_B2JRL2 Transcriptional regulator, LysR family n=2 Tax=c... 79 2e-13 UniRef50_B2T513 Transcriptional regulator, LysR family n=65 Tax=... 79 2e-13 UniRef50_B1KU62 Transcriptional regulator, LysR family n=10 Tax=... 79 2e-13 UniRef50_B4UJ91 Transcriptional regulator, LysR family n=3 Tax=A... 79 3e-13 UniRef50_B8DKE3 Transcriptional regulator, LysR family n=1 Tax=D... 79 3e-13 UniRef50_B8HGN1 Transcriptional regulator, LysR family n=4 Tax=M... 78 3e-13 UniRef50_C6D4H5 Transcriptional regulator, LysR family n=4 Tax=B... 78 3e-13 UniRef50_C9RA29 Transcriptional regulator, LysR family n=1 Tax=A... 78 4e-13 UniRef50_A8LLX5 Transcriptional regulator n=4 Tax=Rhodobacterace... 78 4e-13 UniRef50_Q47V29 Substrate-binding transcriptional regulator, Lys... 78 4e-13 UniRef50_Q75NE2 Regulatory protein n=1 Tax=Pseudomonas sp. BS Re... 78 5e-13 UniRef50_A2WDL9 Transcriptional regulator n=2 Tax=Burkholderia R... 77 5e-13 UniRef50_Q1IRM1 Transcriptional regulator, LysR family n=1 Tax=C... 77 6e-13 UniRef50_Q1J2L5 Transcriptional regulator, LysR family n=2 Tax=D... 77 6e-13 UniRef50_C1A9Z7 LysR family transcriptional regulator n=1 Tax=Ge... 77 6e-13 >UniRef50_P52662 HTH-type transcriptional regulator pecT n=151 Tax=Enterobacteriaceae RepID=PECT_DICD3 Length = 316 Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust. Identities = 193/286 (67%), Positives = 236/286 (82%) Query: 1 MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR 60 M + +RP++NLDLDLLRTFVAVADLNTFAAAA AVCRTQSAVSQQMQRLEQL+GKELFAR Sbjct: 1 MTNTSRPVLNLDLDLLRTFVAVADLNTFAAAAVAVCRTQSAVSQQMQRLEQLIGKELFAR 60 Query: 61 HGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNR 120 HGRNKLLTEHGIQ LGYARKIL+FNDEAC+SLM+S++QG LTIGASD++ADTILPF+L R Sbjct: 61 HGRNKLLTEHGIQFLGYARKILQFNDEACASLMYSDIQGTLTIGASDDTADTILPFILQR 120 Query: 121 VSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYI 180 V++V+PKL++ V +KR+A M +ML+ ++DL++TT + LRTSPT WYC+A+Y Sbjct: 121 VTNVFPKLSIAVSIKRSAEMTDMLQQGKIDLVITTSNNDDLPHVLLRTSPTLWYCSADYQ 180 Query: 181 LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 Q GE + LV+LD+PSPFR + L L A IPW+++YVASTL AVRAAVKAGLG+T R V Sbjct: 181 YQPGETVSLVVLDEPSPFRALALDQLTAAGIPWKISYVASTLSAVRAAVKAGLGITVRSV 240 Query: 241 EMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 EMMSP+LRVL +GLP LPDT Y LC +P +NEL I+ A+ES Sbjct: 241 EMMSPELRVLGEEEGLPKLPDTRYYLCRNPDHDNELTNAIFSAIES 286 >UniRef50_C5BE75 HTH-type transcriptional regulator PecT n=26 Tax=Enterobacteriaceae RepID=C5BE75_EDWI9 Length = 333 Score = 300 bits (767), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 142/284 (50%), Positives = 202/284 (71%) Query: 1 MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR 60 MI RPI NL+LDLLRTF+AV + N+FAAAA +V RTQSA+SQQMQRLE L+GKELF R Sbjct: 28 MIQIQRPIPNLELDLLRTFIAVVEGNSFAAAAESVHRTQSAISQQMQRLESLIGKELFVR 87 Query: 61 HGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNR 120 GR K LTEHG+++LGYAR+IL NDEAC SLM+ ++ GVL IG+ D++A+TILP LL R Sbjct: 88 SGRGKSLTEHGVKMLGYARRILNLNDEACLSLMYDDVDGVLRIGSPDDTANTILPELLAR 147 Query: 121 VSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYI 180 S YP+L +++ VKR+ ++ E L++ E+D+ ++T + + LR+SP+ W+C Y Sbjct: 148 FSKAYPRLIIEIVVKRSPFLMEALKNDEIDMAISTTECTDYSGFILRSSPSLWFCGLNYK 207 Query: 181 LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 P+PLV LD+PS +R+M + L + IPWR+AY A+TL RAAV AGLGV AR + Sbjct: 208 FDADTPLPLVSLDEPSTYRNMAINHLERFGIPWRIAYTATTLSGARAAVAAGLGVMARSI 267 Query: 241 EMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 E+ DL +L +GLP LP+ ++ L ++ + A+V+++++ Sbjct: 268 ELFGDDLCILGESEGLPKLPNIKFNLYIRRNNPPKAAKVLFESL 311 >UniRef50_D0ZAY7 Transcriptional regulator, LysR family n=3 Tax=Enterobacteriaceae RepID=D0ZAY7_EDWTE Length = 257 Score = 298 bits (764), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 147/239 (61%), Positives = 180/239 (75%) Query: 46 MQRLEQLVGKELFARHGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGA 105 MQRLEQLVGKELFAR GRNK LT+HG+QLL YARKILRFNDEAC SL+ +LQG L +GA Sbjct: 1 MQRLEQLVGKELFARQGRNKYLTDHGVQLLNYARKILRFNDEACHSLINDHLQGTLVVGA 60 Query: 106 SDESADTILPFLLNRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALN 165 +D+SAD+ILP LL R +++YPKLA+DVR++RNA + ML EVDL V+T + + Sbjct: 61 TDDSADSILPQLLGRFTALYPKLAIDVRMQRNADIQLMLLDNEVDLAVSTGCEPSLPSTL 120 Query: 166 LRTSPTHWYCAAEYILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAV 225 LR SPT W+CA +Y G PI LV+LD+PS FR + A L+ A +PWRLAYVASTLPA+ Sbjct: 121 LRRSPTVWFCATDYDFTPGVPIELVVLDEPSAFRSLATAALDAAGLPWRLAYVASTLPAL 180 Query: 226 RAAVKAGLGVTARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 RAA+KAGLG++ARP+EMMS LRVL DGLP L DTEY LC P N LA ++ A+ Sbjct: 181 RAALKAGLGISARPIEMMSSSLRVLGEADGLPRLADTEYSLCLAPQCRNPLAVTLFDAL 239 >UniRef50_C1DFD4 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=C1DFD4_AZOVD Length = 317 Score = 254 bits (649), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 131/293 (44%), Positives = 187/293 (63%), Gaps = 4/293 (1%) Query: 1 MISANR----PIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKE 56 M++A R P LDL+LLRTF+AVAD +FA A + RTQS+V+QQMQRLEQ VG Sbjct: 8 MMNAERKAPMPSPTLDLELLRTFIAVADSQSFAEAGQRLARTQSSVTQQMQRLEQSVGVA 67 Query: 57 LFARHGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPF 116 LF + GR K LT+ G QLL AR++L ND+A +SL L GVL IG+ + ADTILP Sbjct: 68 LFQKQGRQKQLTDAGRQLLRRAREMLALNDDALNSLREEGLSGVLRIGSPHDVADTILPP 127 Query: 117 LLNRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCA 176 +L+ ++ P+L L++ V R+ ++ E L VD++++T + LRTSP W C+ Sbjct: 128 ILSHIARAAPRLRLEIDVGRSPFLMEDLHRGRVDMIISTREDPNLEGFPLRTSPVWWICS 187 Query: 177 AEYILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 A+Y+ P+PL+L+D+ S + L L + IPWR AY AS L V+AA++AGLG+T Sbjct: 188 AQYLHMPHAPLPLILIDESSIYHRYALEALEQHRIPWRQAYQASNLIGVKAAIRAGLGIT 247 Query: 237 ARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 AR +E++ PD+RVL +GLP LPD Y L P+++N + + Y + S+H Sbjct: 248 ARSMELLGPDMRVLGEKEGLPRLPDVTYHLWIRPNTHNPMVRKAYDLIRSHHE 300 >UniRef50_C6BGY1 Transcriptional regulator, LysR family n=2 Tax=Ralstonia pickettii RepID=C6BGY1_RALP1 Length = 289 Score = 240 bits (613), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 118/276 (42%), Positives = 180/276 (65%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 NLD+DLLRTFVA+A TFAAAAA V RTQSAV+QQMQRLE+ +G LF + GR+K +T Sbjct: 3 NLDIDLLRTFVAIAHHETFAAAAARVGRTQSAVTQQMQRLEEEMGCALFEKRGRHKTMTP 62 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G++L+ YA KIL ND+A + + IG+ + AD+ILP LL R+S + P+L Sbjct: 63 DGVRLVAYAHKILALNDQAVQVIQTGGPIEKIRIGSPHDVADSILPNLLRRLSKLSPELQ 122 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 +++ V R+ ++ + L + +DL ++T +AF + LRTSP W CA ++I P+PL Sbjct: 123 MEINVGRSPFLMDALRDKTLDLAISTRYDNAFPGIKLRTSPMVWICAEDFIFNPAAPVPL 182 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 V+ D+ S FR + + L+ IPWR +Y++ TL ++AA+ AGLGVTAR E++ ++RV Sbjct: 183 VMADELSLFRQLSIECLDAHHIPWRTSYLSPTLTGIKAAISAGLGVTARTTELLDANMRV 242 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 L+ DGLP LP+ + L P+ + + + ++ + + Sbjct: 243 LTEADGLPRLPEVAFYLYVQPTCTSPVLRDLFDSTD 278 >UniRef50_A1WQD6 Transcriptional regulator, LysR family n=12 Tax=cellular organisms RepID=A1WQD6_VEREI Length = 292 Score = 233 bits (594), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 121/280 (43%), Positives = 174/280 (62%), Gaps = 2/280 (0%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 LDL+LLR+F AV ++FAAAA + RTQSA++QQMQRL++ +G LF + GR K LTE Sbjct: 3 TLDLELLRSFAAVVSHHSFAAAAVHLGRTQSAITQQMQRLQEQIGHPLFVKQGRQKRLTE 62 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL YAR +L NDEA +L +G L IGA + A+T+LP LL V+ P L Sbjct: 63 RGERLLNYARHMLALNDEALRNLRQGRFEGNLRIGAPHDVAETLLPSLLAEVARTAPLLQ 122 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHR--PSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 LD+ + R+ Y+ LES EVD++++ S F+ + LR SPT W CAA Y+ +P+ Sbjct: 123 LDIHIGRSPYLMTSLESGEVDMIISNRADPQSQFEGVVLRNSPTVWLCAASYVHDPAKPV 182 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL++ D PS FR + L+ A + W Y++S L ++AA++AGLGVTAR VE + L Sbjct: 183 PLIMADGPSIFRRIGHEALDAAGVAWTPRYMSSGLVGIKAALRAGLGVTARGVEQLDAGL 242 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 RVL DG+P LPD Y L N + + +++ ++ + Sbjct: 243 RVLDASDGMPRLPDLTYYLYVRSRVVNPVTRQVFETLKQH 282 >UniRef50_Q0K9T5 Transcriptional regulator, LysR family n=2 Tax=Burkholderiales RepID=Q0K9T5_RALEH Length = 284 Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 117/260 (45%), Positives = 162/260 (62%), Gaps = 4/260 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 NLD+ LLRTFVAVA+ FA AA V RTQ+AVSQQMQ+LE + LF R GR+K LT Sbjct: 5 NLDIGLLRTFVAVAEKENFAVAAEQVFRTQAAVSQQMQKLETALDCVLFERVGRSKRLTT 64 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL YAR+I+ NDEA ++ + +GA ++ D+++P L + V+P L Sbjct: 65 AGTRLLDYARRIVGLNDEAYRAMTQRAFDEPVKVGACADAVDSLIPEYLKMCAEVFPGLR 124 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVT---THRPSAFKALNLRTSPTHWYCAAEYILQKGEP 186 +D++V R ++ L E+DL+V P F + LRTSP W A Y Q G P Sbjct: 125 VDIQVGRRRWLTSSLRRGEIDLVVMLDPVPNPE-FDQVVLRTSPVTWIAGARYHHQPGAP 183 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +PLVL++ PF M + +L+ A+IPWR+A+ STL +RAA++AG+GVT R VEM++PD Sbjct: 184 VPLVLIEGACPFHSMAIKSLSDANIPWRVAFQTSTLAGIRAALRAGMGVTPRTVEMLAPD 243 Query: 247 LRVLSGVDGLPPLPDTEYLL 266 L+VL G+P LP Y L Sbjct: 244 LKVLDPHAGMPALPTISYRL 263 >UniRef50_Q7WCR5 Probable LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7WCR5_BORBR Length = 307 Score = 211 bits (537), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 105/287 (36%), Positives = 172/287 (59%), Gaps = 4/287 (1%) Query: 6 RPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNK 65 R + +LD+ LRT V +A +F+A A + +TQ A++ QM +LE +G LF + GR++ Sbjct: 10 RSVRHLDMQQLRTLVTIAQTGSFSATAEKLFKTQPAITHQMHQLEATLGTALFEKQGRSR 69 Query: 66 LLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVY 125 +LTE G ++L YA ++L NDE LQG L IG+ ++ +T+LP +L + S Sbjct: 70 VLTEDGQKMLKYASQVLALNDEVFRVFQ-ERLQGTLRIGSPHDAVETLLPSILRQASQAL 128 Query: 126 PKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGE 185 P+L +DV + R + E+L+ E+D+ ++ F+ L L+ SP W CAA+Y+ + + Sbjct: 129 PQLNIDVCIDRAPRLFELLQRGEIDMAISARFHQEFEGLILKRSPVVWLCAADYVHRPDK 188 Query: 186 PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSP 245 +PL+L D S +R+M LA L + I W + + L ++AA++AGLGVT R +++++P Sbjct: 189 ALPLILADGSSIYREMALAALEQHHIRWTVTRIVPDLVGIKAAIRAGLGVTPRSIDLLAP 248 Query: 246 DLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQ 292 D+R+L DGLPPLP+ Y L P +++ A+ QA E W+ Sbjct: 249 DMRMLDEADGLPPLPEMTYHLWIRPHADDSPAR---QAYEMLRQAWE 292 >UniRef50_A3JCT6 Transcriptional regulator, LysR family protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JCT6_9ALTE Length = 291 Score = 209 bits (531), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 114/277 (41%), Positives = 170/277 (61%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +LDL LLRTFVA+ D FA AA V ++Q A+SQQM RLE + LF + GR K LT Sbjct: 3 HLDLSLLRTFVAICDEENFAKAALKVHKSQPAISQQMGRLENELQVSLFIKCGRRKKLTA 62 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G++L YAR++L +DE ++L L G + IGA + ADT+LP +L + P+L+ Sbjct: 63 AGVRLSEYARRLLALHDELWTTLDDQELIGPVRIGAPADIADTVLPSILQSFARANPRLS 122 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 + + V R+ + +ML + E+DL ++T + + L LR+SP W A++Y L EP+ L Sbjct: 123 MAIHVGRSPDLMDMLFAGELDLTISTRKADGYPNLVLRSSPVVWIAASDYQLVSDEPLSL 182 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 VL D+PS FR + L L + ++ +Y+A L ++AAV+AGLG+TAR +EM++P+ RV Sbjct: 183 VLADEPSIFRAIALEALTREQWDYKESYIAPNLAGIKAAVRAGLGITARSIEMVTPEFRV 242 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 L GLP LP + L S +E A+ +YQ + S Sbjct: 243 LGKHQGLPSLPIINFHLYLRNDSPSEAARKLYQLLAS 279 >UniRef50_A6W298 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=A6W298_MARMS Length = 283 Score = 184 bits (467), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 98/255 (38%), Positives = 158/255 (61%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 NL + L+T +A+ + +F+AA+ V RTQSAV+ QMQ LEQ++G LFA +GRN+ LT Sbjct: 4 NLQISHLKTLIAINEEGSFSAASERVGRTQSAVTHQMQNLEQIIGTPLFAMNGRNRELTN 63 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G+ LL +A +I+ ++A S+ + G + +G E A+ + P +L + +P Sbjct: 64 AGLTLLRHAYEIIALCNQAVSAAEKNFNIGTIRVGTPLEIAEDLWPQVLRVFNEAWPNTR 123 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 + + V+R+ + ++LES E+DL ++T R A K L + +W AA++ EP+PL Sbjct: 124 VILHVERSPLLMQLLESGELDLAISTRRLGAHKGKPLTSLAVNWIAAADWEYIPREPLPL 183 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 +L D+PS FR M L+ L+ + +P+ +V+S++ VR+AV AGLGVTAR + P++++ Sbjct: 184 ILTDEPSMFRRMALSALDISGLPYYEKFVSSSMLGVRSAVIAGLGVTARTISGFPPEIQL 243 Query: 250 LSGVDGLPPLPDTEY 264 L GLPPLPD Y Sbjct: 244 LDSKIGLPPLPDISY 258 >UniRef50_Q390C5 Transcriptional regulator, LysR family n=7 Tax=Burkholderia RepID=Q390C5_BURS3 Length = 323 Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 97/259 (37%), Positives = 143/259 (55%), Gaps = 2/259 (0%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 NLD+D LRT +A L + AA + R+QSAVSQQM++LE +G+ LF R GR + TE Sbjct: 27 NLDMDALRTLIAADRLGSLNRAADRIGRSQSAVSQQMRKLETQIGQPLFRRQGRGLVPTE 86 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +L YAR+IL NDEA ++ + ++G + G + A++ LP L + +P + Sbjct: 87 AGELMLSYARRILELNDEAVGAIRGAAIEGAVRFGLPGDFAESWLPVALGQFKRTHPGVR 146 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYC--AAEYILQKGEPI 187 +D+ V N + + L+ E+D+++ R A +L T P W + + G P+ Sbjct: 147 VDIVVDGNGALLDRLDGGELDIVLAMGRGHRADAEHLVTLPMAWIGPQGIDVRPRAGVPL 206 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 L L P FR L+KA IPWRLAY +L ++ A V GLG++AR + + P L Sbjct: 207 DLALYKPPCLFRKAGTDALDKAGIPWRLAYTTGSLQSLWAGVAGGLGISARTMVGVPPAL 266 Query: 248 RVLSGVDGLPPLPDTEYLL 266 R L DGLPPLP + L Sbjct: 267 RQLGERDGLPPLPSVDVCL 285 >UniRef50_C7C7Z1 Transcriptional regulator, LysR family n=4 Tax=Alphaproteobacteria RepID=C7C7Z1_METED Length = 322 Score = 166 bits (420), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 100/281 (35%), Positives = 149/281 (53%), Gaps = 6/281 (2%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD DLLR F+ + + +F AA + RTQS VS Q++RLE +G+ +F R GR+ LT Sbjct: 25 LDFDLLRAFLHIVESGSFTRAAERIGRTQSTVSLQIKRLEDGLGRRVFDRDGRDLQLTPE 84 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LLGYAR+IL +E C+ +M + GV+ +G ++ A LP +L R + +P+++L Sbjct: 85 GEILLGYARQILSLGNEVCARIMEPEVDGVVRLGTPEDFATAHLPDVLARFARAHPRVSL 144 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSA-FKALNLRTSPTHWYCAAEYILQKGEPIPL 189 +V ++ + DL++ P + + W + L G PIPL Sbjct: 145 EVHCDFTVHLLDGFSRGLYDLVLLKREPQGPGGGVGIWCEVLEWVASPGLALGSG-PIPL 203 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 VL P +R L L A +PWR+ Y + +L ++AAV AGLGVT P M+ L Sbjct: 204 VLAPAPDVYRKRALQALEAARLPWRIVYTSQSLLGLQAAVSAGLGVTVLPKGMIQSGLIR 263 Query: 250 LSGVDGLPPLPDTEYLLCYDPSS----NNELAQVIYQAMES 286 +SG G P LP TE +L P S + LA+ I A+E+ Sbjct: 264 VSGTYGFPALPATEVVLYRAPGSLPRAADLLAEHIMHALEA 304 >UniRef50_Q0FXE0 Probable transcriptional regulator n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FXE0_9RHIZ Length = 302 Score = 164 bits (415), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 98/281 (34%), Positives = 148/281 (52%), Gaps = 6/281 (2%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD+DLLRTFVA+ D +FAAAA V R+ SA+S Q++RLE G EL R R+ LT Sbjct: 16 LDIDLLRTFVAIIDEGSFAAAANKVGRSPSAISMQVKRLEDTTGTELLRRDARSVRLTAE 75 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LLG+AR+ + N A +L L+G L +G D+ +T+LP +L R S YP + + Sbjct: 76 GETLLGFARQFMDLNRRAIGALGRPELEGQLHLGLPDDYGETVLPSMLRRFSESYPSVVV 135 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALN---LRTSPTHWYCAAEYILQKGEPI 187 DV ++ + + ++D+ V + A+ L T W A +P+ Sbjct: 136 DVTMQNTRETLALFDRGKLDVAVFSFDEDGGNAVGAECLFTDALVWVGAPGGTAHLHDPL 195 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL + D+ +R LA L + + PWR+AY + P RAAV+AG+ + D+ Sbjct: 196 PLAMWDESCVWRRSALAALERVERPWRVAYTCAHTPGQRAAVRAGIAIAPVSRIFAGDDV 255 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSN-NELAQVIYQAMESY 287 R+L DGLPP+ D Y + N +E A+VI + ++ Sbjct: 256 RILGEADGLPPMND--YSIGMKLRENPSEQAKVIAHHLRTF 294 >UniRef50_A4SIM7 Transcriptional regulator, LysR family n=3 Tax=Gammaproteobacteria RepID=A4SIM7_AERS4 Length = 297 Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 98/287 (34%), Positives = 154/287 (53%), Gaps = 7/287 (2%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +NLDLD LR++V D +FA AA +CR+ SAVS Q+++LEQ G EL + GR+ + T Sbjct: 6 LNLDLDALRSYVLGLDCGSFALAAQRLCRSTSAVSAQLKKLEQQCGTELVMKRGRHLVPT 65 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G +LLGYA+++L NDEA +L LQG + +G ++ +++LP +L + +P L Sbjct: 66 ASGERLLGYAKRLLELNDEAVLALKGELLQGEIRLGVQEDFGESLLPAVLGPLCRQHPTL 125 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSA-FKALNLRTSPTHWYCAAEY----ILQK 183 + R+ RNA + + + +D+ + P A + W + + +L + Sbjct: 126 RMTTRIDRNAQLMKGIREGTLDMALAWQHPEERIDAHLIDLVSLQWIAHSNWDPAPLLAR 185 Query: 184 GEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMM 243 GEP+PLVL D P R L L+ A IPWR+A+ + +L + AA++AGLG+T R M Sbjct: 186 GEPLPLVLFDAPCLMRSRALKALDDAGIPWRIAFTSQSLGGIWAALQAGLGITVRSAIDM 245 Query: 244 SPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNE--LAQVIYQAMESYH 288 L L+ V P L + S E L ++ QA++ H Sbjct: 246 PTSLSPLAYVLPSPGTLGVVLLGAGNGSGEAERQLQSLLTQAVQRAH 292 >UniRef50_B1LS77 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=B1LS77_METRJ Length = 294 Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 95/262 (36%), Positives = 144/262 (54%), Gaps = 5/262 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 NLD+D+LRTFV +L +FA AA + R+QSAVS Q+++LE+ VG+ L + GR LT Sbjct: 6 NLDMDVLRTFVTGFELGSFARAAERLGRSQSAVSTQLRKLEEQVGQPLVQKAGRGLALTA 65 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LGYA+++L NDEA L + L+G +G + + A++ LP +L R S YP++ Sbjct: 66 AGESMLGYAKRLLELNDEAVDRLRGTELEGWARLGLAQDFAESWLPAVLKRFSRAYPRVR 125 Query: 130 LDVRVKRNAYMAEMLESQEVDL-MVTTHRPSAFKALNLRTSPTHWYCAAEYILQKG---E 185 ++V+V A + E E+D+ +V A A + P W ++ G E Sbjct: 126 IEVQVGLGAQLIEKALKDELDVALVWGDGGGAPHAQRVADVPIRWIGPPDWPGLAGLGRE 185 Query: 186 PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSP 245 P+PL P FR ++ L+ +PWRL + + +L + AA + GLG+TAR + Sbjct: 186 PVPLAAFAPPCTFRSAAVSALDARGLPWRLVFTSPSLSGLWAAAEGGLGITARTAVGLPK 245 Query: 246 DLRVLS-GVDGLPPLPDTEYLL 266 L VL GLPPLP+ L Sbjct: 246 TLSVLDPAATGLPPLPNAALTL 267 >UniRef50_Q4K8T2 Transcriptional regulator, LysR family n=16 Tax=Pseudomonas RepID=Q4K8T2_PSEF5 Length = 284 Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 148/258 (57%), Gaps = 4/258 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQ-LVGKELFARHGRNKLLT 68 ++D ++LRTFVA+AD F A V RTQSAVS QM+RLE+ ++ ++LF R GR LT Sbjct: 6 SIDTEVLRTFVAIADEGGFTRAGERVNRTQSAVSMQMKRLEEDVLQRQLFQRDGRQVKLT 65 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LLGYAR+IL+ + E ++L ++ G++ IG D+ LP +L+R + YP + Sbjct: 66 AEGQVLLGYARRILKLHSEVFNTLREPHMVGLVRIGTPDDYVMRFLPGILSRFAQSYPLI 125 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 ++V + + ++L+ Q++DL + T P LR W A + + P+P Sbjct: 126 QIEVHCESSK---QLLQRQDLDLTIVTREPGNEIGQLLRKERFVWAVAQCFTPHEQTPLP 182 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L + + R L+ + +R+AY +S+L A+ A V AGL +TA+ +++PDLR Sbjct: 183 LAMFNSDCFCRLWACNALDAIGLDYRIAYNSSSLSAIMAVVSAGLAITAQLESLITPDLR 242 Query: 249 VLSGVDGLPPLPDTEYLL 266 +L +GLP LP+ +L Sbjct: 243 ILGENEGLPELPEASIML 260 >UniRef50_B2IEY6 Transcriptional regulator, LysR family n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IEY6_BEII9 Length = 316 Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 96/286 (33%), Positives = 149/286 (52%), Gaps = 10/286 (3%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + NLD+DLLRT ++L AA + R+ SA+S QM +LE+ VGK LF + GR L Sbjct: 3 LTNLDMDLLRTLSVASELGGLGRAAERLGRSPSAISLQMHKLEEQVGKTLFRKQGRGISL 62 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T+ G LLGYAR+IL NDEA ++ ++G++ +G + LP +L R S YP+ Sbjct: 63 TDAGDLLLGYARRILALNDEALAATRGVGVEGIVRLGVPFDLTSEWLPKVLARFSEAYPR 122 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVT---THRPSAFKALNLRTSPTHWYCAAEYILQKG 184 + +++R R+ + ++ +DL + RP A + P W + + L K Sbjct: 123 VHIELRTDRSVELLQLYNQDLLDLTLAFGPVERPGASFVAEV---PVRWIGSTGFRLDKN 179 Query: 185 EPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMS 244 + +PL+LLD P FR + L++ WRLA+ + +L + AA +AGLG+T R M Sbjct: 180 QDVPLILLDPPCWFRQTGIDALDRHQTAWRLAFTSPSLAGLWAATEAGLGITVRTPLGMP 239 Query: 245 PDLRVLSGVDGLPPLPDTEYLLCYD----PSSNNELAQVIYQAMES 286 L L GLP LP +L P + L ++ + +ES Sbjct: 240 RSLSALDPDHGLPDLPRVSIVLYNSARRYPHLTSFLETILVETLES 285 >UniRef50_B9K1U5 Transcriptional regulator LysR family n=59 Tax=Alphaproteobacteria RepID=B9K1U5_AGRVS Length = 332 Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 92/270 (34%), Positives = 152/270 (56%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD D L+TF+A+ D +F AA V +TQSAVS QM+RLE+ +GK+LF + GR LT Sbjct: 20 LDTDQLQTFIAIVDTGSFTKAAGRVFKTQSAVSMQMRRLEERIGKQLFIKDGRGNRLTAE 79 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LL YAR+I+R N EA ++ + L+G L IG D+ AD +P ++ R + +P + L Sbjct: 80 GEKLLNYARRIVRLNSEAIAAFDDNRLEGTLRIGTPDDYADRYMPEIIGRFAKTHPNVEL 139 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 + + ++ +AE + E+D+ + TH P+ ++ +RT P W +A + L+ P+PL Sbjct: 140 YIVCEPSSDLAEKMARGELDIALVTHNPATRQSDVMRTEPLCWVASANHPLRDDAPVPLA 199 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 + +R + + L+ +++ + + + V AAV AGL V+ P + ++VL Sbjct: 200 VGRRDCNWRQLACSALDADGRDYQILFTSWSSTVVAAAVLAGLAVSVLPESALRTGMKVL 259 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVI 280 +DG PPLP + + P + L I Sbjct: 260 GQLDGFPPLPPVQIGIMKRPGMSPSLMNAI 289 >UniRef50_A6FDC4 Putative uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6FDC4_9GAMM Length = 293 Score = 158 bits (399), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 91/279 (32%), Positives = 145/279 (51%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +N D LR+FV VA+L +F+ ++ +CR QSA+SQQ+Q+LE+ V LF R+ LT Sbjct: 1 MNFDTSQLRSFVTVAELKSFSKSSERLCRVQSAISQQIQKLEKQVNAVLFIRNRNGVTLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G +LL YA K+L NDEA S+L + +G L +G SD A L +L S YP L Sbjct: 61 AQGERLLPYAVKMLSINDEAVSALCENQPKGWLRVGTSDTYATCFLKDILMSCSERYPGL 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 ++V + + M E ++D+++T PS + L P W C+ + K P+P Sbjct: 121 QIEVHCGYSESIWTMYEKGQLDIVLTQCCPSNINSETLHVEPLLWMCSRTSDVYKKTPVP 180 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L L R++ L L + + + + +S+ + AAV +G V+A + D + Sbjct: 181 LALFSKGCADREIALNGLVQVGKDYTMGFHSSSHAGILAAVSSGYYVSAILASTSNQDFK 240 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 VL+ DG PPL + E + Y+ ++N Q+ + Y Sbjct: 241 VLTETDGFPPLGNLEISMAYNDHADNSPTQMFACVVREY 279 >UniRef50_B7L193 Transcriptional regulator, LysR family n=3 Tax=Rhizobiales RepID=B7L193_METC4 Length = 293 Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 93/269 (34%), Positives = 143/269 (53%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +LDL LLRTFVA+ D +A AV RTQSAV+ Q+ RLE +G+ +F R LT Sbjct: 3 DLDLALLRTFVAIVDTGGVTSAGRAVGRTQSAVTHQIGRLEAQLGRPVFGPDRRRITLTA 62 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LL YAR +LR ++EA + + G +T+G D A +LP +L R S YP++ Sbjct: 63 DGEILLEYARAMLRLSEEARARFAVPGVAGRVTLGTPDLYAAYLLPEVLGRFSRAYPEIE 122 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 + + +R+ Y+ L ++D+ + T +P + +RT P W + +PIPL Sbjct: 123 IQLHCRRSVYLHAELMRDKLDIAILTEQPDLHRGEAVRTEPLSWVAGRGGRPETDDPIPL 182 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 +L S +R L L A W + V+ T+ ++AAV A L V+ P MS +R Sbjct: 183 AVLPAGSVYRQRALEALGAAGRRWTIRSVSDTIAGLQAAVFARLAVSVFPHCAMSGGMRR 242 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQ 278 L DG+P LP+ + +L P+ ++ A+ Sbjct: 243 LGEEDGMPRLPNIDLVLVRRPTGISDAAE 271 >UniRef50_C5A914 Regulatory protein n=2 Tax=Burkholderia RepID=C5A914_BURGB Length = 301 Score = 156 bits (394), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 95/263 (36%), Positives = 141/263 (53%), Gaps = 5/263 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 NLD+D+LRTFV +L +FA AA + R+QSAVS Q++RLE+ VG+ L + GR LT Sbjct: 6 NLDMDVLRTFVTGFELGSFARAAERLGRSQSAVSTQLRRLEEQVGQPLVRKSGRGLALTT 65 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LLGYA+++L NDEA SL +++ G +G + A+ LP LL R + +PK+ Sbjct: 66 AGESLLGYAKRLLALNDEAVESLRGADVAGWARLGLPQDFAEGWLPALLQRFARAHPKVR 125 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAF-KALNLRTSPTHWYCAAEY--ILQKG-E 185 ++V+V R + E E+D+ + + + + P W A + + G E Sbjct: 126 VEVQVDRAVPLVERTLRGELDIALVWGDAAGMPRGEKVADVPLQWIGAPGWPGVASLGPE 185 Query: 186 PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSP 245 P+P P FR + L+ A +PWRL + + +L + AA + GLG+TAR + Sbjct: 186 PLPFAAFAPPCGFRSAAVGALDAAGLPWRLVFTSPSLSGLWAAAEGGLGITARTAIHLPK 245 Query: 246 DLRVLS-GVDGLPPLPDTEYLLC 267 L VL GLP L LLC Sbjct: 246 TLAVLDPAATGLPRLASIPLLLC 268 >UniRef50_Q4ZQB6 Regulatory protein, LysR:LysR, substrate-binding n=5 Tax=Pseudomonas syringae group RepID=Q4ZQB6_PSEU2 Length = 296 Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 94/272 (34%), Positives = 148/272 (54%), Gaps = 4/272 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQ-LVGKELFARHGRNKLLT 68 ++D +LLRTFVA+AD F A AV RTQSAVS QM+RLE+ +V + LF R GR LT Sbjct: 18 SIDTELLRTFVAIADHGGFTRAGEAVNRTQSAVSMQMKRLEEDVVQRPLFQREGRVLNLT 77 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LLGYAR+IL+ + E ++L ++ GV+ IG+ D+ LP +L + + YP + Sbjct: 78 AEGQVLLGYARRILKLHSEVFNTLREPHMIGVVKIGSPDDYVMRFLPGILAQFAQAYPLV 137 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 ++V + + + L+ ++DL + T +P LR W A + + PIP Sbjct: 138 QVEVHCEPSDLL---LQRHDLDLTIVTRKPGTEIGTLLRQERLMWMEAVGFAPHEQTPIP 194 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L + + RD L+ +R+AY +S++ A+ A V AGL VTA+ + + DLR Sbjct: 195 LAMFNTHCFCRDWACNALDGMGRDYRIAYSSSSMAAITAVVSAGLAVTAQFQSLATADLR 254 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVI 280 +L + P LP +L P + + + + + Sbjct: 255 ILGEAEQFPQLPTASIVLLRKPENPSPITECM 286 >UniRef50_C8X2B4 Transcriptional regulator, LysR family n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X2B4_DESRD Length = 309 Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 93/272 (34%), Positives = 139/272 (51%), Gaps = 1/272 (0%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 ++D LLR FV VA+L +F AA + RTQSAVS Q++RLEQ +GK+L AR R LT Sbjct: 5 DIDSQLLRAFVTVAELGSFTRAATKLYRTQSAVSMQVRRLEQQLGKKLLARSSRQVTLTS 64 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +L YAR+ILR + + + + G + +G D+ A LP +L+ +YP + Sbjct: 65 LGEMVLPYARRILRIQEAMLNEVGQEQISGKVRLGMPDDYAAYFLPQVLSHFGLLYPNIQ 124 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 +++ + + + M+ S E+DL V T P +R W A+ + +P+PL Sbjct: 125 MEIFCELSRNLEPMVHSGEIDLAVVTRHPENASGRFVRREQLVWVEDAQAFAHEQQPLPL 184 Query: 190 VLLDDP-SPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L + FR L L A PWR+ + L +RA V AGL VT +SP +R Sbjct: 185 ALFPEGYCAFRLQALKALENAGTPWRIICESRGLAGIRATVSAGLAVTVVTRNTLSPTMR 244 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVI 280 ++ GLP LP+ E L +E V+ Sbjct: 245 IIGPEQGLPDLPEIEIGLLTPGWGEDEATDVL 276 >UniRef50_A0NUY3 Transcriptional regulator n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NUY3_9RHOB Length = 296 Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 84/251 (33%), Positives = 144/251 (57%), Gaps = 1/251 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD+D LRTF+A+A+L +F A AV +TQSAVS QM+RLE+ VG+ +F + GR LTE+ Sbjct: 5 LDIDQLRTFLAIAELGSFTKAGEAVHKTQSAVSMQMRRLEERVGQPIFIKDGRQSRLTEN 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G++L+ +AR+++ NDE S+ G + +G D+ AD +LP +L + + P + + Sbjct: 65 GLRLVEFARRMIMLNDETLSAFNGQKEVGHVKLGVPDDYADRLLPQVLAAFNRLNPSIEV 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSA-FKALNLRTSPTHWYCAAEYILQKGEPIPL 189 V + + E + +D+ +TT + + + +R P +W A+++ + + L Sbjct: 125 QVECISSHRLTEAIREGTLDVAITTSQDTMDLRGEIIRREPLYWVTASQHSAHTQDVVRL 184 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 L +R + + L++A P+R++Y +S+ A+ AV+AGL VT P + +R+ Sbjct: 185 ALGPVTCGWRRLSMDALDRAGRPYRVSYTSSSAAALVGAVQAGLAVTVFPESAIRDGMRI 244 Query: 250 LSGVDGLPPLP 260 L DG P LP Sbjct: 245 LDEKDGFPTLP 255 >UniRef50_C0QAW4 HTH-type transcriptional regulator (LysR family protein) n=2 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QAW4_DESAH Length = 282 Score = 154 bits (388), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 83/270 (30%), Positives = 153/270 (56%), Gaps = 2/270 (0%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +NL +D LRTFV++A+ F + R+QSAVS Q++RLE+ +GK+LF R G++ LT Sbjct: 1 MNLPIDYLRTFVSLAETKGFTRTGIQLNRSQSAVSMQIKRLEEEIGKKLFERIGKSVKLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L+ YA +I++ +D+A +L +L+G + G+ + +LP LL R +S YP + Sbjct: 61 PEGNILIKYAMRIIKEHDDAVRALSKPDLEGFIRFGSPEHYTTGVLPKLLARFASAYPDV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 +++R + + + E ++ E+D+ + T + ++ P W A E+I+QK + +P Sbjct: 121 LVEMRCENSDKIKEAVDRGEIDIGICTQISDGGQIIS--HDPVVWVAAPEFIMQKHKTLP 178 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 + + ++ FR + L K+ I +R+AYV+ ++ + AVKAG+ V + + +L+ Sbjct: 179 IAVFEEDCIFRSWAIEALEKSGIRYRIAYVSRSISGLLDAVKAGIAVAPIILSNVPAELK 238 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQ 278 + GLP LP + +L +E+ + Sbjct: 239 TVDLEHGLPVLPVSNIVLHKTKKKTSEIIE 268 >UniRef50_B9JGF1 Transcriptional regulator protein n=57 Tax=Rhizobiales RepID=B9JGF1_AGRRK Length = 348 Score = 154 bits (388), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 92/257 (35%), Positives = 143/257 (55%), Gaps = 2/257 (0%) Query: 5 NRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRN 64 RPI LD ++LRTFVA+A+ F+ AA AV RT SAVS Q+++LE+ +G LF R R+ Sbjct: 55 RRPIPLLDNEVLRTFVAIAETGNFSTAADAVFRTPSAVSMQIKKLEEQLGVTLFLRDARS 114 Query: 65 KLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSV 124 LT+HG LL YAR IL ++EA S + L GV+ +GA D+ + +LP +L S Sbjct: 115 VSLTQHGEMLLSYARNILALSNEAVSRFIMPELSGVVRLGAPDDIGERLLPSILKSFSES 174 Query: 125 YPKLALDVRVKRNAYMAEMLESQEVDLMV--TTHRPSAFKALNLRTSPTHWYCAAEYILQ 182 YP + +DV V + + + +E Q +DL + RP + + T W A Sbjct: 175 YPSIMVDVVVDMSIQLKKRIEEQRLDLALINCATRPFPTEGEVIYTERLVWAGAKCGTAY 234 Query: 183 KGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEM 242 + +P+P+ + +D +R LA L + P+R++Y+++ A RAA+ + L V P Sbjct: 235 RRDPLPISIWEDGCIWRSEALAQLERHKRPYRVSYLSAHTMAQRAAIVSDLAVAPFPRSY 294 Query: 243 MSPDLRVLSGVDGLPPL 259 + D+ +L +GLP L Sbjct: 295 IGEDMEILGPNEGLPEL 311 >UniRef50_A3YDA6 Transcriptional regulatory protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YDA6_9GAMM Length = 283 Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 92/267 (34%), Positives = 146/267 (54%), Gaps = 4/267 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L+LLRTF+AVA+ +F AA TQS VS Q++RLE+ +G+ LF R R+ LT+H Sbjct: 1 MNLELLRTFLAVAEGKSFTAATQKRFMTQSTVSHQIKRLEESLGQVLFVRTTRSCKLTDH 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPF--LLNRVSSVYPKL 128 G L YARKI+ DE LQG +++ A ++ LPF +L R + + P + Sbjct: 61 GEILFTYARKIINLCDELDDKFSEKPLQGHVSLAAPEDYLS--LPFSKILARFTRIQPDV 118 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 LD+RV + + S E+DL V P + L W + ++ L + +P Sbjct: 119 ELDIRVGLSETFRAQVTSGEIDLAVLAQIPPTGEGQPLYRDKLVWLASEDFHLGTHKSVP 178 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L L+ P +R +A L+K ++PW+LA + A+++AV +GL VT + + P ++ Sbjct: 179 LALVPSPCLYRKTAIAALDKQNMPWQLALNCHSHEAIKSAVISGLAVTVLTEKDLRPGMK 238 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNE 275 VL+ DG P L ++E L + P +NE Sbjct: 239 VLTQKDGFPDLGESELSLHHAPHLSNE 265 >UniRef50_Q07MM7 Transcriptional regulator, LysR family n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07MM7_RHOP5 Length = 287 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 94/269 (34%), Positives = 142/269 (52%), Gaps = 2/269 (0%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 ++LDL+L+RTF+AV D F A + +TQS +S ++RLE++VG+ LF R GR+ +LT Sbjct: 1 MDLDLELVRTFLAVIDHGGFTRAGGRLHKTQSTISLHIRRLEEIVGRPLFDRQGRHAVLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 E G L YA ++ NDEA L + G++ +G ++ A LP L R ++ +P + Sbjct: 61 EQGEILRTYAEALVGLNDEALLKLRRPPVTGIVRLGLPEDFATRHLPLALRRFTATHPAI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 L+VR A + L + ++D ++ A + L P W A L +P+P Sbjct: 121 RLEVRSSLTAELMRDLGNGDLDFVLARRELDATEGQLLWREPLIW-VGARGRLFSADPLP 179 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 LV+ +R VL + W + Y +S+L V+AAV AGLGVTA + PD Sbjct: 180 LVMFPHGCVYRPEVLRRMRSCPRAWEIVYTSSSLAGVQAAVSAGLGVTALAESTVLPDFA 239 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELA 277 VL +GLP LP T+ L + NE A Sbjct: 240 VLGAREGLPELPQTDIAL-FTGVGRNEAA 267 >UniRef50_A9IU06 Transcriptional regulator, LysR-family n=23 Tax=Proteobacteria RepID=A9IU06_BORPD Length = 307 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 94/255 (36%), Positives = 132/255 (51%), Gaps = 1/255 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD LLRTF+ + D +FA AA + T SAVS M+RLEQLVG L AR R LT+ Sbjct: 20 LDTVLLRTFLEIVDSGSFATAAERLALTPSAVSGHMRRLEQLVGASLLARTTRRLELTQA 79 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L Y R IL EA + L + L+G L IGAS++ A LP +L R +P + Sbjct: 80 GDTLYAYGRNILDLEREARAKLRGTPLRGRLRIGASEDFAGAWLPQVLQRFRQSHPAATV 139 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALN-LRTSPTHWYCAAEYILQKGEPIPL 189 +++V A + E +DL+ ++ L P W AA+ +L GEP+PL Sbjct: 140 ELKVGITADLLRQQERGHLDLVFGKQCSRVERSGTLLWNEPLVWAYAADRLLVAGEPLPL 199 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 + +P +R+ +A L + D WR+ + +S++ AA +AG VT LRV Sbjct: 200 AVFPEPCVYRESAVAALGRTDRAWRIVFESSSMAGCLAAARAGFAVTVVADSQRGAGLRV 259 Query: 250 LSGVDGLPPLPDTEY 264 L G DGLP LP + Sbjct: 260 LDGEDGLPELPAARF 274 >UniRef50_A8ILZ3 Transcriptional regulator n=2 Tax=Xanthobacteraceae RepID=A8ILZ3_AZOC5 Length = 305 Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 101/282 (35%), Positives = 143/282 (50%), Gaps = 7/282 (2%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 I NLDLDLLR+F AVA+L + +AAA + RTQSAVS QM RL + +G + R GR L Sbjct: 16 IKNLDLDLLRSFAAVAELGSISAAAQRIGRTQSAVSLQMDRLAEQLGFPVVERKGRGVAL 75 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G L AR++L ND + S L +G + A++ L +L R+ S++P Sbjct: 76 TPRGAAFLDDARRLLDLNDRVLGHHLRSGFSEPLRLGFVQDVAESALQRILARLGSLFPG 135 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + VRV M E L E+DL + + W A L EP+ Sbjct: 136 APITVRVCSTNTMIEKLRIGELDLAAGYRVETDVPTRLIMREQMCWIGARSLRLNPEEPV 195 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL++ + P FR ++ L A +R+A + +LP V AAV AGLG+T R + PDL Sbjct: 196 PLLMFESPCIFRSAAISALTAAGRSFRIALTSPSLPGVMAAVGAGLGITLRSARSLRPDL 255 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSN-----NELAQVIYQAM 284 + G G PLP EY L Y + N +++ QVI + + Sbjct: 256 MTI-GDLGTQPLPHFEYAL-YSRAENRLPALDQIEQVIEEEL 295 >UniRef50_B1LTB4 Transcriptional regulator, LysR family n=4 Tax=Alphaproteobacteria RepID=B1LTB4_METRJ Length = 298 Score = 150 bits (380), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 94/275 (34%), Positives = 142/275 (51%), Gaps = 1/275 (0%) Query: 7 PIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKL 66 P + DLDLLRTFVA+ D +F AA+ + TQS VS Q++RLE + + LF R GR Sbjct: 4 PSLPFDLDLLRTFVAIVDNGSFTRAASRLGLTQSTVSLQIKRLEDGLTRRLFDRDGRELK 63 Query: 67 LTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYP 126 LT G LL YAR+IL+ E S ++ L GV+ +G ++ A T L +L + +P Sbjct: 64 LTSEGEVLLTYARQILKLGGEVLSKIVTPELTGVVRLGTPEDFATTHLSEVLACFARAHP 123 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSA-FKALNLRTSPTHWYCAAEYILQKGE 185 ++AL+V + + D+++ P + W + + + Sbjct: 124 QVALEVNCDFTVNLLDDFSKGRYDMILFKREPQGPSGGTKVWREVLDWVASPRLVAEGNG 183 Query: 186 PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSP 245 PIPLVL P +R L+ L+ A WR+ Y + +L ++AAV+AGLGVT P EM+ Sbjct: 184 PIPLVLSPAPDVYRKRALSALDAAGRDWRIVYTSPSLAGLQAAVQAGLGVTVLPTEMVPE 243 Query: 246 DLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVI 280 D+ +S LP L DTE +L P + Q++ Sbjct: 244 DMVSVSARLRLPKLSDTEIVLYQAPGHVSPAVQLL 278 >UniRef50_C4X8P7 NADH dehydrogenase transcriptional regulator n=9 Tax=Enterobacteriaceae RepID=C4X8P7_KLEPN Length = 341 Score = 150 bits (379), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 88/257 (34%), Positives = 138/257 (53%), Gaps = 9/257 (3%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 LDLD LR+FV + +FA AA + R+ SAVS Q+++LE G L + GR+ +LT Sbjct: 55 GLDLDALRSFVTGMECGSFAQAALRLSRSTSAVSAQLKKLESQCGTALVTKQGRHLVLTA 114 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL YAR++L NDE +L L G + +G ++ ++++P +L + +P++ Sbjct: 115 EGEKLLSYARRLLALNDETLRALQGERLTGEIHLGMQEDFGESLMPGILGQFKRHHPQVR 174 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEY----ILQKGE 185 + RV RN + + L + +DL + L L P W + +L GE Sbjct: 175 IVARVDRNGPLRQALAEEALDLALLWQTEDQGPGLGL--CPLAWIAHPDLDIRALLVSGE 232 Query: 186 PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSP 245 P+PLV+ D P R +A L+ A IPW++ +V+ +L + AAV+AGLG+T R M Sbjct: 233 PLPLVMFDSPCLMRSRAIACLDAAGIPWQVVFVSHSLSGIWAAVQAGLGLTIRTRIGMPG 292 Query: 246 DLRVLSGVDGLPPLPDT 262 +LR GL P P + Sbjct: 293 NLRP---AGGLLPAPGS 306 >UniRef50_Q1R159 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=Q1R159_CHRSD Length = 299 Score = 150 bits (378), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 97/278 (34%), Positives = 146/278 (52%), Gaps = 2/278 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDL +L TFV V D F AAA A+ QS VS M+RLE G+ L R + + + Sbjct: 7 LDLVVLNTFVTVVDKGGFTAAADALYLAQSTVSAHMKRLEDTFGQPLLQRGRKTPVPSPA 66 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LL +AR++LR N A + L GV+ +G D+ LP L+ + YP + L Sbjct: 67 GERLLSHARQMLRQNALAWQDVSEQRLDGVVRLGIPDDYV-VYLPEALSEFEAQYPGVEL 125 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL- 189 V + + + + + +DL +TT +P + L PT W AA + Q+ P+PL Sbjct: 126 QVDCGLSVDLVQSVRAGSLDLAITTRQPKSPGGEVLCREPTVWAGAAGHDTQRRTPLPLA 185 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 V D FR+ LA L+ IPWR+AY +++L + AAV+AGL +T M+ LRV Sbjct: 186 VSKDGVCIFRERALAALDAMGIPWRIAYTSASLSGLTAAVRAGLAITVLTPSMLGAGLRV 245 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 + +GLP LP TE L P NE + + +++++ Sbjct: 246 IGSGEGLPELPMTEIALHRSPGRPNEATRQLALSLQTH 283 >UniRef50_Q1ZUY1 Transcriptional regulator n=3 Tax=Vibrionaceae RepID=Q1ZUY1_PHOAS Length = 289 Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 96/266 (36%), Positives = 147/266 (55%), Gaps = 12/266 (4%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +LDLD LR FV +L +FAAAA + R+ SA S Q+++LEQ L + GR+ TE Sbjct: 3 SLDLDALRCFVLGIELGSFAAAAERLNRSPSAASAQLKKLEQQCNTSLVTKIGRHLEPTE 62 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +L YAR++L+ NDEA + L+ ++L G + G ++ +D +LP LL S +P L Sbjct: 63 AGEIILAYARRMLQLNDEALNQLVENSLTGKVVFGLQEDFSDVLLPQLLGVFSRSHPNLQ 122 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVT--THRPSAFKALNLRTSPTHWYCAAEYILQK---- 183 L V R+ + + ++S E+D + + + + L L P +WY A L++ Sbjct: 123 LQSIVGRHQELMDGIQSGELDFSLGWRGEKSAPYSEL-LAELPLYWYGPANKYLKESINI 181 Query: 184 GEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMM 243 +P+PLV+LD R +A L++ IPW++ +V +L + +AV AGLGVT R Sbjct: 182 SKPVPLVMLDGSCIIRQQAIAALDRKGIPWKITFVGRSLSNLWSAVDAGLGVTVRS-SFS 240 Query: 244 SPDLRVLSGVDGLPPLPDTEYLLCYD 269 PD +S +DGLP L LC D Sbjct: 241 HPD--TISKLDGLPVLGKLR--LCLD 262 >UniRef50_A8TVM4 Transcriptional regulator, LysR family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TVM4_9PROT Length = 285 Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 98/283 (34%), Positives = 148/283 (52%), Gaps = 4/283 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 ++LD +LLRT +A+ D AAA V R+ SAVS Q++RLE +G +LF R GR + T Sbjct: 1 MDLDTNLLRTVLALVDGGGLDAAAQHVGRSPSAVSLQIKRLEDRLGAQLFDRSGRRLVPT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G+ L+ YAR+ILR ND+A + + +L + + A+T LP L S +P++ Sbjct: 61 RRGLLLVDYARRILRLNDDAVRDIAEPAVSQILRVALPQDYAETWLPGFLQTFSVNHPEI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 L V V E L EVD+ + P A+ + P W A+ + GE +P Sbjct: 121 DLRVSVGGGVDALEALARDEVDVAMALGLPLTEGAIPVAEVPLLW-LGADSAVSSGEVVP 179 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 +V P FR+ + L++A PW++ + + +L VRAAV+AGLGVT R E + D R Sbjct: 180 IVAFPPPCRFRERGIEALDRAGRPWKIVFTSPSLGGVRAAVRAGLGVTVRTPEGLG-DGR 238 Query: 249 V-LSGVDGLPPLPDTEYLLCYDPSSNNELA-QVIYQAMESYHN 289 V + G LPPL + PS+ + A Q + A++ Sbjct: 239 VDVGGAWALPPLGTVTLAVYPGPSARSGPAGQFVDSAVDGLRQ 281 >UniRef50_A5ED63 Transcriptional regulator, LysR family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5ED63_BRASB Length = 290 Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 84/273 (30%), Positives = 140/273 (51%) Query: 15 LLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQL 74 +LR+ ++V + + A + RTQ A++ Q+QRLE+L GK+LF GR LTE G + Sbjct: 1 MLRSLISVVETGSITETARRLGRTQPAITLQLQRLEELTGKQLFVHGGRRLALTEDGGIV 60 Query: 75 LGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVRV 134 L YAR ILR +DE S L ++G + +G D A ILP +L+ +P++ +++ Sbjct: 61 LTYARSILRLHDELISQLASQEIEGQVVLGTPDLYAAFILPSILSVFRKSFPRIQVELNC 120 Query: 135 KRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLVLLDD 194 + + E+++ EVD+ + T +R W + + PIPL LL Sbjct: 121 ALSTPLVELVKRSEVDIALVTRMNDFTGGQVVRREQLVWMTGEQSAAHQERPIPLALLPQ 180 Query: 195 PSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGVD 254 + +RD +A L A++ WR+A + ++ ++AA AG+ VT + +R L D Sbjct: 181 GNIYRDHAIAALEAANLRWRIACQSESVGGLQAAAFAGMAVTVLGRSALVAGMRELGPAD 240 Query: 255 GLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 GLP LP E LL + ++ A ++ + Y Sbjct: 241 GLPALPQVELLLYKSSGATSKAATALHDYLAHY 273 >UniRef50_Q2SFI4 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFI4_HAHCH Length = 296 Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 94/267 (35%), Positives = 137/267 (51%), Gaps = 16/267 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 L DLL+TFVAVAD F A A+ R+Q A+S Q++RLE+LVG L R+ + T Sbjct: 4 LPTDLLQTFVAVADYGGFTQAGDALGRSQPAISLQIRRLEELVGATLLLRNNKALAPTPE 63 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G+ LL YAR IL N EA L L G L +G +E A + LP +L + S +P + L Sbjct: 64 GLILLQYARDILALNKEAMIKLSQPELAGCLRLGIPNEFASS-LPEVLGKFSQAHPNVTL 122 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRT-SPTH-------WYCAAEYILQ 182 +V ++ + E S+E+DL+ H +LRT SP W + + Sbjct: 123 EVTCDLSSNLVERYRSKELDLVFALHT-------SLRTISPEEGWMEDLVWATSIHHTCH 175 Query: 183 KGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEM 242 P+PL++ +R ++ L+ IPWR+ Y ++ +RA V AGLGVT + Sbjct: 176 TRHPVPLIVAPRGCVYRHRIIEALDSMSIPWRIVYTCASFSGIRAGVLAGLGVTVLGKSI 235 Query: 243 MSPDLRVLSGVDGLPPLPDTEYLLCYD 269 + LRV+ D LP LP + L Y+ Sbjct: 236 VPEGLRVVESSDYLPALPGVQMRLLYN 262 >UniRef50_Q13P59 Transcriptional regulator, LysR family n=8 Tax=Proteobacteria RepID=Q13P59_BURXL Length = 296 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 90/266 (33%), Positives = 148/266 (55%), Gaps = 2/266 (0%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 D+DLLRTFVAV + +F A+A V R+Q+AVS Q++RLE ++G LFAR+ RN LT Sbjct: 4 EFDVDLLRTFVAVVETGSFTKASATVHRSQAAVSMQIKRLETMLGTTLFARNTRNLSLTR 63 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LL YAR++L ++EA S+++ + G + +GA D+ ++L +L R S++YP + Sbjct: 64 PGNTLLEYARRVLALHEEAWSAIVRPEVTGRVVLGAPDDYVSSLLSPVLRRFSNLYPHVE 123 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAA-EYILQKGEPIP 188 +++ ++ +A ML ++DL T R + +R+ P W A+ + + P+P Sbjct: 124 IEIVCAQSTSLAPMLADNKIDLAFVT-RDRKLRGEFVRSEPMVWVGASLDTPVLAASPLP 182 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 + L + R LA L+ A I +R A+ +++L + A V AGL V A + P L Sbjct: 183 VGLYEPGCVARQHTLAALDGARIRYRAAFSSASLMGLVATVDAGLSVIALTRCSVPPRLT 242 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNN 274 +L GLP + E ++ S+ Sbjct: 243 ILGEAQGLPKIAPLEIVVARSAKSDR 268 >UniRef50_A5V9A5 Transcriptional regulator, LysR family n=3 Tax=Alphaproteobacteria RepID=A5V9A5_SPHWW Length = 278 Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 96/254 (37%), Positives = 144/254 (56%), Gaps = 6/254 (2%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +NL ++LR+FVA+ D + AA V TQSA+S Q++RLE+LV K LF R GR LT Sbjct: 3 VNLPTNMLRSFVAIVDAGSMLNAAERVFVTQSALSLQIKRLEELVQKPLFHREGRRLALT 62 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LLGYAR++L +DEA +++ G + +G + AD +L LL R S ++ Sbjct: 63 AAGELLLGYARRVLALHDEALAAVTAGQFAGPVRVGMVQDFADLLLSGLLARFSELHADA 122 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 + RV A + EML ++DL++ P A +RT+P+ W+ + + K E +P Sbjct: 123 QIFARVAGTAELQEMLARGQLDLLIGYAAPG--DAHAVRTAPSIWF-GDDALTLKAE-LP 178 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L +L+ P FR+ +A L+ A PWR+A L +RAA+ +GLGV++R + Sbjct: 179 LAVLEKPCRFREAAIAALDAAGRPWRIAVETPNLSTLRAAIASGLGVSSRTGLFLRDLPA 238 Query: 249 VLSGVDGLPPLPDT 262 V G+ LPPLPD Sbjct: 239 VTPGL--LPPLPDV 250 >UniRef50_Q1YP17 Transcriptional regulator, LysR family protein n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=Q1YP17_9GAMM Length = 284 Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 89/277 (32%), Positives = 149/277 (53%), Gaps = 3/277 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 NL +DLLR FV+VA L++F A + R+Q A+S QMQRLE+LV ++L R+GRN LTE Sbjct: 3 NLPMDLLRAFVSVAQLSSFTKAGELLGRSQPAISLQMQRLEELVDEQLLQRNGRNLELTE 62 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G L GYA +IL ND A S L S ++G + +G E A ++P +++R + YP + Sbjct: 63 AGENLYGYANQILSLNDLAISQLSKSTVEGKIRLGIPSEFATVLMPRIVSRFAKAYPNVT 122 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTH-RPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 L+V + + + DL++ PS+ + ++T W +A+ L K + +P Sbjct: 123 LEVNCELSKSLLSKSGKASHDLILALEDNPSSTNSNLVKTDELVWVSSADKPLLKTDVVP 182 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L++ +R+ + TL++A+ W++ Y L ++ A++ GLGVT + +L+ Sbjct: 183 LIVAAQGCIYRNRAIRTLDQANQSWQVVYTIPDLTGIQYAIQEGLGVTVLAKSTVPENLK 242 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 +L P L + L S+ N Q ++ +E Sbjct: 243 ILPPSARFPALGEVGISLI--SSARNRKNQAVHLLIE 277 >UniRef50_A9BYU9 Transcriptional regulator, LysR family n=22 Tax=Proteobacteria RepID=A9BYU9_DELAS Length = 306 Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 88/257 (34%), Positives = 140/257 (54%), Gaps = 1/257 (0%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 ++D LLR+F AVA+ +F AA V TQS VSQQ++RLE+ +G L R GR+ T Sbjct: 19 SIDPTLLRSFCAVAETGSFTRAAQGVHLTQSTVSQQIRRLEEQMGCTLLDRSGRHVECTL 78 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL YA++IL DEA L + + VL IG ++ A L L ++ P+L Sbjct: 79 EGERLLAYAQRILALMDEAVEQLAGAT-EAVLRIGVPEDFAGHALMPALGALARSQPQLR 137 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 L++ + + + L++ E+DL + R + + P W +A + +P+PL Sbjct: 138 LELTSGLSQAIWQQLQAGELDLAIVKQRSGSTPGMARWPEPLAWIDSARHPCHGMDPLPL 197 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 V+ +R + L+ A WRLAYV+++L ++ AAV+ GLG++ P ++ P R+ Sbjct: 198 VVFPQGGLYRSEMTHALDAAGRRWRLAYVSASLASLEAAVEQGLGISLLPRRLVGPGHRL 257 Query: 250 LSGVDGLPPLPDTEYLL 266 L G+ G P+PD E L Sbjct: 258 LDGMAGFAPVPDVEVAL 274 >UniRef50_B6R8G3 Transcriptional regulator n=2 Tax=Rhodobacteraceae RepID=B6R8G3_9RHOB Length = 299 Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 83/252 (32%), Positives = 144/252 (57%), Gaps = 1/252 (0%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 ++D+D LRTF+AVA+L +F A AV +TQSAVS QM++LE+ +G+ +F + GRN +TE Sbjct: 4 SIDVDQLRTFLAVAELGSFTKAGDAVHKTQSAVSMQMKKLEERIGQPIFVKDGRNSRITE 63 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 HG +L+ YAR+++ NDE S+ + G + +G D+ A+ +LP +L + + P + Sbjct: 64 HGRRLVEYARRMVALNDETLSAFHEPEIAGRIRLGLPDDYAERLLPQVLAAFNRLNPCIN 123 Query: 130 LDVRVKRNAYMAEMLESQEVDL-MVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 LDV + + ++ E+D+ +VT+ ++ +R P W + E+I+ P+ Sbjct: 124 LDVECSSSNEIGRRIQKGELDVGIVTSGDCTSVPGQIVRREPLQWVGSREHIVYDQRPLR 183 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L + +R +A L+ +I ++ Y +++ A+ AV AGL + P + R Sbjct: 184 LAVGPTTCSWRQAGVAALDHLNIQHQVVYTSASAAALAGAVNAGLAIAILPASALRQGQR 243 Query: 249 VLSGVDGLPPLP 260 +L +GLPPLP Sbjct: 244 ILGEKEGLPPLP 255 >UniRef50_A0NRR7 Transcriptional regulator, LysR family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NRR7_9RHOB Length = 280 Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 89/276 (32%), Positives = 148/276 (53%), Gaps = 1/276 (0%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 + LD LLRTF+A D +F+ AA V ++ + VS Q+QRLE +GK LF R RN LT Sbjct: 1 MQLDHALLRTFLACVDAMSFSRAATRVHKSPATVSMQIQRLEDRIGKPLFVRDTRNLALT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G +L GYAR+ILR +DEA + ++G +TIGA D+ +LP +L R +S++P++ Sbjct: 61 RTGEELEGYARRILRLHDEAVEAFRQPEMEGTVTIGAPDDYIAAMLPDVLRRFASLFPRV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 L+V ++ + +E +DL + T R + +R P W + + + +P+P Sbjct: 121 ELNVVCAQSTALLPQVEDGRIDLAIVT-RTGGTEGRLIRREPMVWISSRDGQAMERDPLP 179 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 + L + S R + LA L ++ + +R AY + + A+ V+AGL V A + P + Sbjct: 180 VALYEPGSQARTVALAALGRSGLRYRSAYSSFSHSALVTLVEAGLAVAAVVQMAVPPTVE 239 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 + GLPPL + +L + + + + A+ Sbjct: 240 RVDHDSGLPPLDPLDIILVRSKHTRSSACEALADAL 275 >UniRef50_A4TW42 LysR-family transcriptional regulator n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TW42_9PROT Length = 300 Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 97/284 (34%), Positives = 151/284 (53%), Gaps = 3/284 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +LDLDLLRTFV + D F A + RTQS +SQQ++RLE +G+ L R GR +TE Sbjct: 13 SLDLDLLRTFVGIVDSGGFTRAGQRLHRTQSTISQQIKRLEDQIGQPLLLRQGRQVQVTE 72 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LLGYAR++L +DEA ++L+ + ++ +G S++ A LP +L S P++ Sbjct: 73 AGETLLGYARRLLALDDEARATLVRREVGEIIRLGVSEDFASRHLPRVLTAFSRANPQVR 132 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 LD+R + + + E+D+ + A+ + P W +A L P+PL Sbjct: 133 LDIRADLSVKLRADFDLGELDVALFKGEQPMDSAVGVWPEPVFWTASAHESLPPLHPLPL 192 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 L FR V+ L+++ PWRLAYV+ +L ++AAV +G+ + + PDLRV Sbjct: 193 ALFPQGCLFRRQVVDRLDQSRRPWRLAYVSPSLAGIQAAVASGMALAPLGQTGLHPDLRV 252 Query: 250 LSGVD-GLPPLPDTEYLLCYDP--SSNNELAQVIYQAMESYHNP 290 L + GLP L + L P +S + LA I + + + P Sbjct: 253 LEAAEMGLPDLSPVWFSLVVRPGGASRHHLAADIARVVGALDLP 296 >UniRef50_C5B683 Transcriptional regulator, LysR family n=6 Tax=Methylobacterium RepID=C5B683_METEA Length = 300 Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 88/254 (34%), Positives = 137/254 (53%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +L+LDLLR FVAVA+ +F AAA V R+QSAVSQ++ RLE+++G+ +F R R LT Sbjct: 13 DLELDLLRAFVAVAETGSFTAAADVVHRSQSAVSQKVLRLEEILGRRVFDRTSRTLGLTP 72 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL AR++L FND + G L +G S++ LP LL R +YP + Sbjct: 73 DGERLLVAARQMLEFNDRVMRAWREPPTSGTLRLGVSEDFIPGQLPKLLARFGRLYPDVH 132 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 +D+ + + E ++ +D ++ S + + P W +++Y L P L Sbjct: 133 IDLMTGLSCNLLEAYDADRLDAVIAKRSGSNLRGRVIWREPLVWLASSDYELDFTRPARL 192 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 V+L P +R++++A L+ W A AS+L V+AAV GLGVT + +++ Sbjct: 193 VMLAPPCSYRELMIAALDSVRREWVAACTASSLMGVQAAVAGGLGVTLLGRSFVQEGMQI 252 Query: 250 LSGVDGLPPLPDTE 263 L + P LP TE Sbjct: 253 LRAPELWPALPMTE 266 >UniRef50_B3QIV6 Transcriptional regulator, LysR family n=4 Tax=Rhodopseudomonas palustris RepID=B3QIV6_RHOPT Length = 304 Score = 144 bits (362), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 88/271 (32%), Positives = 140/271 (51%), Gaps = 2/271 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDL LL+TF+ + +F+ + + RTQ AVS Q+ RLE+ G LF + GR +LT H Sbjct: 5 LDLRLLQTFIVLVQTGSFSETSRRLGRTQPAVSLQLNRLEEATGAPLFTKVGRKLVLTNH 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LGYAR I+ DE + L L GV+ +G D A +LP +L S YP + + Sbjct: 65 GELVLGYARTIMGLQDELRARLAAPKLDGVVVLGMPDLYAAYLLPGILADFRSAYPNVDV 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTH-WYCAAEYILQKGEPIPL 189 +++ ++ + +E E+DL + T P AFK L W + + P+PL Sbjct: 125 ELKCALSSKLMASVERAEIDLAIVTGMP-AFKVGELVAQEELVWVASERSSVHLENPVPL 183 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 +L + FRD LA L WRL+ ++ ++ ++AAV +G+ V+ + P +R+ Sbjct: 184 AMLPPGNIFRDFGLAALESIGRIWRLSCISESISGIQAAVFSGIAVSVVGKSSVLPGMRI 243 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVI 280 L D P LP + +L S+N A+ + Sbjct: 244 LGRGDTFPALPKVDLVLYRSARSSNPAAEAL 274 >UniRef50_Q98HR2 Transcriptional regulator n=1 Tax=Mesorhizobium loti RepID=Q98HR2_RHILO Length = 285 Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 88/265 (33%), Positives = 147/265 (55%), Gaps = 3/265 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDL+LL+TFVAV + + + AA V R+QSAVS QMQRLE++VG +L R R Sbjct: 5 LDLNLLKTFVAVVESGSLSNAAPRVGRSQSAVSMQMQRLEEMVGNQLLVRGPRTVTPNAI 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L YAR++L+ +DEA +S+ G + +G D+ A +LP +L+R + +P + + Sbjct: 65 GEDFLIYARRLLKLSDEAWASVTRPKETGSVRLGVPDDYAAFLLPPVLSRFAEDHPLVTV 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALN-LRTSPTHWYCAAEYILQKGEPIPL 189 ++ +++ + + L +DL + T P + L+ +R W + ++ + +P+P+ Sbjct: 125 ELICEQSTALVKTLAEGRLDLAIVTRLPD--QPLDVIRLERFVWVASPNHVAWQTDPLPV 182 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 L + R VL L +AD +R Y +++L + A V+AGL V + P LR+ Sbjct: 183 ALFEPGCAARMNVLQALGEADRSYRCTYSSASLLGLIAVVQAGLAVAGLAQRSVPPSLRI 242 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNN 274 + G +GLP LPD E + +P S+ Sbjct: 243 IGGNEGLPVLPDLEIGILRNPLSST 267 >UniRef50_D0IY48 Transcriptional regulator, LysR family n=22 Tax=Proteobacteria RepID=D0IY48_COMTE Length = 333 Score = 143 bits (361), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 94/298 (31%), Positives = 161/298 (54%), Gaps = 20/298 (6%) Query: 12 DLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHG 71 DLD+LR+F L +FA AA + R+ SA+S Q+++LE G L + GR LTE G Sbjct: 7 DLDVLRSFSTGVALGSFARAADKLGRSTSAISAQLKKLEAQCGTPLLRKAGRGLELTEAG 66 Query: 72 IQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALD 131 LL YA ++L NDEA +++ S L+G++ +G ++ + +LP +L R + +P++ ++ Sbjct: 67 ETLLAYAHRLLELNDEAVAAVSGSQLRGLVRLGLQEDLGEALLPAVLGRFARAHPQVRIE 126 Query: 132 VRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTS---PTHWYC-AAEYIL------ 181 V R+ + E ++DL + + ++ T P HW AA +L Sbjct: 127 ACVGRSDELRERFAQGQLDLAMLWDVGADLSGIHAETVMRLPLHWIGPAAPEVLDSLGCL 186 Query: 182 ---QKG--EPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 Q+G + + LV+L++P P R++V A L +A I WR A+ +++L + AA AGLG++ Sbjct: 187 QPDQEGKLKTLALVMLEEPCPLRELVTAVLERAGIAWRHAFSSASLGPIWAATSAGLGLS 246 Query: 237 ARPVEMMSPDLRVLSGVD-GLPPLPDTEYLLCYDPS----SNNELAQVIYQAMESYHN 289 R + P +R + + GLP LP + +L S S LA ++ +A+ ++ N Sbjct: 247 VRTPFGLPPHVRSYAPEEIGLPHLPTMDLVLGRSHSLLEPSAERLATLLVEAVRAHTN 304 >UniRef50_D0RZH8 Transcriptional regulator n=1 Tax=Acinetobacter calcoaceticus RUH2202 RepID=D0RZH8_ACICA Length = 294 Score = 143 bits (360), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 87/278 (31%), Positives = 148/278 (53%), Gaps = 8/278 (2%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 NLDLD LR FV +L +F AA +CR+ +A+S Q+++LEQ G +L ++GR LT Sbjct: 10 NLDLDALRAFVKGIELGSFYLAAQNLCRSPAAISAQLKKLEQQTGCQLLRKNGRLLELTP 69 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G L +A+ +L ND+ L + GV+ G ++ A+ L L+ + YPK+ Sbjct: 70 SGELLFSHAKSVLAMNDKVLLQLHQTQATGVIRFGLQEDFAEGTLQQLIAQFMLQYPKVQ 129 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKAL-NLRTSPTHW-YCA---AEYILQKG 184 ++V RN + E ++ QE+DL + + A + L+ T W +C+ + I++ G Sbjct: 130 FQIQVDRNLNLLEKVQKQELDLALIWQQDEARENFYELQNVETEWLFCSHPHIQQIIETG 189 Query: 185 EPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMS 244 IPLV+L P R M + L + + W +AY +++ A+ AV+AG+G++ R + + Sbjct: 190 TSIPLVVLQQPCILRQMAIQALEEKGLEWHIAYECNSVQALWPAVRAGIGISLRSLFQIP 249 Query: 245 PDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQ 282 D+++L + LP L + L SS E ++ Q Sbjct: 250 SDIKILKSAE-LPQLRSLSFGLY--SSSKLESGHIVQQ 284 >UniRef50_Q07TP5 Transcriptional regulator, LysR family n=10 Tax=Rhizobiales RepID=Q07TP5_RHOP5 Length = 305 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 88/264 (33%), Positives = 135/264 (51%), Gaps = 1/264 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDLDLLR+FV+V D F A V RTQS VSQQ++RLE +G++L R G+ TE Sbjct: 20 LDLDLLRSFVSVVDSGGFTRAGERVHRTQSTVSQQIKRLEDDLGQQLLNRDGKTVTPTEA 79 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LL YAR++L +EA + + G + +G ++ A L LL R S P L L Sbjct: 80 GERLLSYARRLLSLAEEARDVVARPHQDGAVRLGIPEDFAAYRLTRLLARFSRARPGLRL 139 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQ-KGEPIPL 189 DVR ++ + +E ++DL + A+ + HW + + K + +PL Sbjct: 140 DVRADQSLNLTRDIERGDLDLALLKREAGGRSAIAVWPERVHWVNSRNHPCNAKADSVPL 199 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 + +R + + A W LAY +S+L ++AAV AGLG++ + D Sbjct: 200 IFFPSGCLYRSRAIHAIEAAGRRWHLAYSSSSLAGIQAAVAAGLGLSILSDMSIGTDHHK 259 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSN 273 L+ DG PP+ +TE L P ++ Sbjct: 260 LTARDGFPPIDNTELALVAAPEAS 283 >UniRef50_A8LQJ4 HTH-type transcriptional regulator n=5 Tax=Rhodobacteraceae RepID=A8LQJ4_DINSH Length = 298 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 84/265 (31%), Positives = 141/265 (53%), Gaps = 3/265 (1%) Query: 6 RPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNK 65 R NL DLLRTFV V DL + + RTQ A+S Q++RLE++ GK+L A+ G+ Sbjct: 3 RKFTNLQTDLLRTFVTVVDLRNYTETGRILGRTQPAISLQIKRLEEITGKKLLAQQGKQV 62 Query: 66 LLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVY 125 LT G LLGYAR++LR ND A ++L +++ G L +G + A ++ R + Sbjct: 63 ELTPDGQTLLGYAREMLRLNDRAVANLQQASILGTLRVGLPVDYAIEYFQSIITRFAREN 122 Query: 126 PKLALDVRVKRNAYMAEMLESQEVDLM--VTTHRPSAFKALNLRTSPTHWYCAAEYILQK 183 P + LD+R R+ + L ++D+ +T P+ ++ P W CA ++ + Sbjct: 123 PAVQLDIRCNRSPDLLSALHVDDLDMTIAITDSMPAPHVSVYWSEHPV-WVCARDHRIDP 181 Query: 184 GEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMM 243 +P+ +V + +R ++ LN WR+++ + + A++ AV G+GVTA + + Sbjct: 182 DQPLKVVAHPNGCFYRKRMIDALNTEGRDWRISFESLGVSALQKAVLDGMGVTALTKKTL 241 Query: 244 SPDLRVLSGVDGLPPLPDTEYLLCY 268 P +R+LS +G P L + L Y Sbjct: 242 LPGMRLLSPGEGFPNLANIHVGLFY 266 >UniRef50_A6UAC5 Transcriptional regulator, LysR family n=5 Tax=Rhizobiales RepID=A6UAC5_SINMW Length = 293 Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 90/290 (31%), Positives = 149/290 (51%), Gaps = 3/290 (1%) Query: 6 RPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNK 65 RPI D DLLRTF+A A+ + A AA V RT SAV+ QMQRLE L+G+ + A GR + Sbjct: 2 RPI---DPDLLRTFLAFAEGGSLARAAIVVNRTPSAVTAQMQRLEALIGERILAPAGRGR 58 Query: 66 LLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVY 125 +LT G +L +AR+IL + +A SL + G + +G++ + ADT+LP LL + + Sbjct: 59 VLTPIGEELAAHARRILDAHRDAWLSLRGARADGRIVLGSTQDFADTMLPGLLRLFARSH 118 Query: 126 PKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGE 185 P++ LD+R+ R+ + + ++D+++ + +A L + W C+ ++ + Sbjct: 119 PRIRLDLRIGRSKELTIAFDQGQIDILLAMRQSAAADELIVLREQMLWLCSDRGLVTDTD 178 Query: 186 PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSP 245 +PL +LD P FR ++ L +R+A + +L +RAAV + + VT R +S Sbjct: 179 EVPLAVLDAPCGFRTAAISVLEATGRRFRIAATSPSLSGLRAAVLSSIAVTTRTELFLSA 238 Query: 246 DLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSP 295 + LP LP E+ L + A + + W P Sbjct: 239 GIGRAPEHLALPSLPPAEFSLRLRTRAEEPAADLAALLADELRQDWAQRP 288 >UniRef50_B4E965 LysR family regulatory protein n=19 Tax=Proteobacteria RepID=B4E965_BURCJ Length = 353 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 102/316 (32%), Positives = 156/316 (49%), Gaps = 40/316 (12%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 N D+ LR+ VA DL +FA AA V R+ SAVS Q+++LE+ G LF + GR LT+ Sbjct: 28 NFDVAALRSLVAGVDLGSFAKAADRVARSSSAVSAQIRKLEEQAGTPLFVKAGRGLALTD 87 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +L YAR+++ NDEA +++ NL G + +G ++ + ILP +L R + +PK+ Sbjct: 88 AGNAMLHYARRMIELNDEAAAAVRGVNLDGWVRVGLQEDFGEAILPDVLGRFARAHPKVK 147 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTS---------PTHWY------ 174 ++ RV RNA + + L++ ++DL + P A AL R P W Sbjct: 148 IEARVARNADLLDRLDANQLDLALVWGDP-ASAALVSRAGIDSEAIAQVPMQWIGAAAGG 206 Query: 175 -------------------CAAEYILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRL 215 + GEP+PLV+ D P F L++A +PWR+ Sbjct: 207 GAGVPDGGGDAGVTGRVDETGGRAVHATGEPLPLVVFDRPCRFFGAATDALDRAGVPWRV 266 Query: 216 AYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGVD-GLPPLPDTEYLLCYDPSSN- 273 A+ +L + AA AGLG+T R + +RVL GLP LP +L SS Sbjct: 267 AFTTPSLAGLWAAAAAGLGLTVRSHYGLPASVRVLDAASCGLPALPGLPLILLRRTSSAT 326 Query: 274 ---NELAQVIYQAMES 286 + LA+++ QA+ Sbjct: 327 PTVDRLARIVTQAVRG 342 >UniRef50_Q317K8 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q317K8_DESDG Length = 301 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 87/268 (32%), Positives = 141/268 (52%), Gaps = 16/268 (5%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 + L++DLLR F AVA+ F AA + + TQSAVSQ+++RLE +G+ L R R L+ Sbjct: 1 MELEIDLLRCFAAVAEEGGFTAAGSRIGLTQSAVSQRIRRLEDRLGRRLLVRTTRTLSLS 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LL YA+++L +DEA + L S+++G L IG D +P + + +P + Sbjct: 61 TEGEMLLHYAQRMLALHDEALARLRASSIKGALRIGFVDYFGPDAMPETIRQFIRSFPDI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVT----THRPSAFKALNLR-TSPTHWYCAA---EYI 180 L++ + ++ + ++D++V H + L T + CAA ++ Sbjct: 121 HLELHAGLGMELRQLFDHGKLDVLVAGDDGQHTGTCIARDTLVWACHTAYNCAAARPAFM 180 Query: 181 LQK--------GEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAG 232 L G P+PLV L P FR +A L PW + + A+ + +V AAV+AG Sbjct: 181 LDHLAAEPAATGAPVPLVALPLPCVFRSAAIAALESLQRPWEVVFTATGMASVLAAVRAG 240 Query: 233 LGVTARPVEMMSPDLRVLSGVDGLPPLP 260 LG+T P ++PDL++ + +G PPLP Sbjct: 241 LGITVLPRSALTPDLKIPAPEEGFPPLP 268 >UniRef50_Q141J0 Transcriptional regulator, LysR family n=7 Tax=Burkholderia RepID=Q141J0_BURXL Length = 311 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 95/267 (35%), Positives = 143/267 (53%), Gaps = 7/267 (2%) Query: 5 NRPIINLDLD--LLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHG 62 +R +++ DLD LLRTFV VA+ AA + RTQ+AVS Q++RLE +G+ L R Sbjct: 4 SRTLMSRDLDSSLLRTFVTVAETGAMGVAATRLARTQAAVSMQLRRLEDELGQRLLDRSP 63 Query: 63 RNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVS 122 R LTE G LL YA IL +A +L + G + +G ++ A LP L R S Sbjct: 64 RGVQLTEAGHLLLPYAHAILGAGADARRALSAGQVSGTVRLGMLEDIAVGRLPRALRRFS 123 Query: 123 SVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRT--SPTHWYCAAEYI 180 YP++AL++ V + ++ L +D++V P+ A L T P W A + Sbjct: 124 IAYPQVALEIVVDSSVALSNRLADSSLDVVVGD--PALVDAAPLLTWRQPLFWVGARGFG 181 Query: 181 LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA-RP 239 + P+P+V ++ VLA L +A I WR+ +++LPAV++AV+AGLGV+ Sbjct: 182 REVEAPLPVVAFGGACLWQQQVLAALRRAGIAWRIVCTSTSLPAVQSAVEAGLGVSVLLD 241 Query: 240 VEMMSPDLRVLSGVDGLPPLPDTEYLL 266 + S +RVL DGLP P ++ L Sbjct: 242 GNIRSESMRVLGQADGLPDAPTADFGL 268 >UniRef50_A3YH31 Transcriptional regulator, LysR family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YH31_9GAMM Length = 287 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 79/275 (28%), Positives = 136/275 (49%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 N+D DLLRTFVAV + N F++A+ + +TQS +SQ++ +LE ++G L R RN LT Sbjct: 3 NIDSDLLRTFVAVYECNGFSSASECLNKTQSTISQRLLKLEDMIGCSLMQRTSRNVKLTP 62 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G L YAR+IL+ + EA + L +G D+ A L +L YP L Sbjct: 63 AGKDFLVYARQILKLHAEAIDVAKLAQKNTTLKVGVPDDYAQRFLTPVLRFFRETYPDLI 122 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 +V + + + E E+D+ ++ + + P W + +Y++Q E IPL Sbjct: 123 PEVVCETSVRLIEKTMHGELDMALSIKHDNTIPGEFVCNEPLIWAASPDYLVQGREVIPL 182 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 + + FR + L K +PWR+A+ + + + +V +G VT ++ + RV Sbjct: 183 SVYPEGCIFRSNGIGALAKHSLPWRVAFTSQSPSGISVSVNSGDSVTITSKRLLPDNWRV 242 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 L+ +G P + E +L + P +N + + + Sbjct: 243 LTEEEGFPKIKSAELMLYHSPVFDNPFSSCFEEKL 277 >UniRef50_A5IA94 Transcriptional regulator, LysR family n=6 Tax=Bacteria RepID=A5IA94_LEGPC Length = 283 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 95/270 (35%), Positives = 139/270 (51%), Gaps = 6/270 (2%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +++D L+ F+AVA+ +F AA V RTQSA+SQQ+ +LE L+ K L R GR LT Sbjct: 1 MSIDTITLQCFLAVAETQSFTKAAQRVGRTQSAISQQIAKLENLIEKPLINR-GRELSLT 59 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LGYA++I + E+ LQG + G ++ A IL +L S ++P++ Sbjct: 60 TDGEIFLGYAKRIYELHRESLDRFKAPELQGEIRFGLPEDFASIILSDVLVEFSRLHPRV 119 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMV--TTHRPSAFKALNLRTSPTHWYCAAEYI--LQKG 184 L+V + E + DL++ TT + +++++ T P W E + L K Sbjct: 120 LLNVECDLTLNLIERFNEGKFDLILIKTTQQQVGSESIHVCTEPVEWIGKKELLPLLDKP 179 Query: 185 EPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMS 244 PIPLVL P +R V+ TL+K I WRL Y +++ AAV+AGLG+TA M+ Sbjct: 180 GPIPLVLSPTPCVYRGNVIDTLDKNHIDWRLVYSSASYAGKMAAVRAGLGITAIQRSMIP 239 Query: 245 PDLRVLSGVDGLPPLPDTEYLLCYDPSSNN 274 L L D LP L D L SN Sbjct: 240 NYLERLD-YDFLPVLNDVHVSLLKKSDSNK 268 >UniRef50_A9DC03 Transcriptional regulator, LysR family protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DC03_9RHIZ Length = 301 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 87/255 (34%), Positives = 143/255 (56%), Gaps = 2/255 (0%) Query: 5 NRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRN 64 N P+I LD D+LR+FVA+A+ +F AAAA + RT SAVS Q++RLE+ +G +F R RN Sbjct: 6 NHPLIMLDPDVLRSFVAIAETGSFTAAAARIYRTPSAVSMQIKRLEEQLGVSVFLRDARN 65 Query: 65 KLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSV 124 LT G LLGYAR+++ N E S + S + GV+ IG+ + + +LP +L R + Sbjct: 66 VALTHDGEVLLGYARRLIALNRETISRFVTSEVSGVVRIGSPSDYGEAVLPGVLKRFAKS 125 Query: 125 YPKLALDVRVKRNAYMAEMLESQEVDL-MVTTHRPSAFKALN-LRTSPTHWYCAAEYILQ 182 +P + +DV + +++ + + S +D+ +V+ R S A + T W A Sbjct: 126 HPSVVVDVVIDQSSSLLKRFGSGHLDIALVSCMRGSTSDAGEVVMTDDIVWAGAKGGQAC 185 Query: 183 KGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEM 242 +P+P+ + D+ +R+ LA L K +R+A++ S + RAA+ A L + Sbjct: 186 LMDPLPVSMWDEGCVWRESALAALEKVGRSYRVAFMTSHMAGQRAAILADLAIAPMGRHF 245 Query: 243 MSPDLRVLSGVDGLP 257 + PD+++L GLP Sbjct: 246 VGPDIQILDENCGLP 260 >UniRef50_B1J9W8 Transcriptional regulator, LysR family n=38 Tax=Bacteria RepID=B1J9W8_PSEPW Length = 307 Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 85/288 (29%), Positives = 153/288 (53%), Gaps = 5/288 (1%) Query: 2 ISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARH 61 + +NR + DLDLLR V VAD +F AAA + TQS +SQ+++RLE +VG L R Sbjct: 19 VKSNRAL--FDLDLLRAIVVVADCGSFTTAAARLHSTQSTISQKVRRLEDMVGHRLLVRG 76 Query: 62 GRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRV 121 R+ L T+ G LLGYAR +L ND+ +L + + + +G ++ L+ Sbjct: 77 NRDVLPTDAGQTLLGYARHMLALNDQMLEALAGAMVGVTVRLGVPEDFVGGRTTNALSAF 136 Query: 122 SSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYIL 181 S ++P++ L+V +++ ++ E+DL++ R ++ + + W +A Sbjct: 137 SRLHPQVKLEVTSGLCRDLSQAYDNGELDLVLLKQRRNSREGVACWPERLQWIDSARMPS 196 Query: 182 QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVE 241 + +PIPLV +RD ++ + WR+++ +S+L ++AAV G+G++ P Sbjct: 197 FELDPIPLVTFPPRGLYRDDMITAIEGMGRRWRISFTSSSLSGIQAAVADGMGISLLPPR 256 Query: 242 MMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSN---NELAQVIYQAMES 286 +P+ RVL GLP + E ++ + P+++ LA+V+ Q +E Sbjct: 257 AATPEHRVLGRQHGLPEVDSYEIVIVHRPTADVMVTALAKVMSQVLEG 304 >UniRef50_B8H5P5 Transcriptional regulator, LysR family protein n=4 Tax=Alphaproteobacteria RepID=B8H5P5_CAUCN Length = 301 Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 93/286 (32%), Positives = 143/286 (50%), Gaps = 9/286 (3%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 NLDLDL+R F+ V + +F A + R+QSAVS Q++RLE+ +G+ L +R R+ TE Sbjct: 6 NLDLDLVRAFLVVCEQRSFTRAGERLGRSQSAVSLQVRRLEEQLGQPLLSRDPRHVAPTE 65 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G L AR++LR NDE + L +++G + +GA ++ A LP +L + +P++A Sbjct: 66 QGAAFLPQARRLLRLNDEILAGLGADDIEGEVRLGAPEDFATQHLPAVLGSFARSHPRIA 125 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRT--SPTHWYCAAEYILQKGEPI 187 L V + + L +DL + P L +R P W + ++ P+ Sbjct: 126 LTVTCDLTLNLLDRLSEGALDLALVKREPLG-PDLGVRVWREPLVWVALDPELARRDGPV 184 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PLV P +R +A L A WR Y + +L AA++ GLG++ P EM DL Sbjct: 185 PLVAAPAPCVYRKRAVAALEAAGRGWRATYTSPSLAGQLAALRGGLGLSVLPREMAPDDL 244 Query: 248 RVLSGVDGLPPLPDTEYLLCY----DPSSNNELAQVIYQAMESYHN 289 +LS D LP L D E L P + LA I A++ + Sbjct: 245 TILS--DDLPRLEDAEIALLKARGTPPPAAERLADHILSALDRQRS 288 >UniRef50_B0FL86 Putative LysR family transcriptional regulator n=1 Tax=Mesorhizobium sp. F28 RepID=B0FL86_9RHIZ Length = 361 Score = 136 bits (343), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 93/289 (32%), Positives = 142/289 (49%), Gaps = 4/289 (1%) Query: 14 DLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQ 73 DLLRTFV VA+ F+ AA + TQS VS Q++RLE + R R+ LTE G Sbjct: 61 DLLRTFVMVAECGGFSRAAERLNSTQSTVSHQIKRLESQAARTFLNRTTRSLSLTEDGEV 120 Query: 74 LLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVR 133 L+ YARK LR D+A L+G + + ASD+ A LP +L R V+P++ L V Sbjct: 121 LIDYARKFLRLADDAKQHFNSPRLKGHVRLAASDDFATYSLPEILGRFKRVHPEVRLTVD 180 Query: 134 VKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLVLLD 193 V + + L+ E DL++ + W A + ++ +P+PL + Sbjct: 181 VGLSGNLVSRLDEGEFDLVLGKRSLGETDGELVSREKLVWVAAPDIVINPHQPLPLAVYP 240 Query: 194 DPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGV 253 P +R + LN A W + Y + +L +RAA AG+ VT ++PDL L Sbjct: 241 KPCLYRSTAIEVLNAAGRSWNVVYTSPSLSGIRAAAIAGIAVTPLAANFVTPDLMCLDPD 300 Query: 254 DGLPPLPDTEYLL----CYDPSSNNELAQVIYQAMESYHNPWQYSPMSA 298 + LP LPD E+ L + + ELA+++ +A PW + P++ Sbjct: 301 EDLPELPDVEFALFRTRSVETPAARELAELLLRARPLGIFPWHHKPLTG 349 >UniRef50_C3KKD9 Putative LysR family transcriptional regulator n=1 Tax=Rhizobium sp. NGR234 RepID=C3KKD9_RHISN Length = 284 Score = 136 bits (343), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 87/273 (31%), Positives = 148/273 (54%), Gaps = 3/273 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHG-RNKLLT 68 +LD+DLLR F V F+ AA + R+Q A+S Q++RLE+ VG ++F R R LT Sbjct: 4 DLDIDLLRAFATVHQSGGFSQAAEILGRSQPAISLQIKRLEERVGGQVFERSAARGVPLT 63 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G+ L+ YAR+I+ +DEA + + +++ + +G +E + LP +L+ S V+P+ Sbjct: 64 PVGMTLMEYARQIIALHDEALARVTLPSIKTFVRLGILEELGNYRLPAVLHSFSKVFPEA 123 Query: 129 ALDVRVK-RNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 L V+VK N+ M EML+ + +D++V ++ L + W + +P+ Sbjct: 124 NLQVQVKLSNSLMIEMLQGR-LDIIVIAAEAEVPNSIPLWSEQLVWVASNAVPSPMRQPM 182 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PLV L DP +R + L+ A+ P+ +ST+ +RA+V AG+GVT ++ L Sbjct: 183 PLVTLPDPCFYRKAAIRALSAAEQPYTTVCNSSTMAGIRASVIAGIGVTVMGKTEVTEGL 242 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVI 280 RVL GLP L D + ++ + +A+ + Sbjct: 243 RVLGSDAGLPRLSDADVVIYFRDKGFESVAKAL 275 >UniRef50_P16931 HTH-type transcriptional regulator dgdR n=16 Tax=Proteobacteria RepID=DGDR_BURCE Length = 294 Score = 136 bits (343), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 89/267 (33%), Positives = 141/267 (52%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +L++DLLR+FV +A++ + AAA V RTQSA+SQQM+RLE +V + LF R GR +LT Sbjct: 13 SLEIDLLRSFVVIAEVRALSRAAARVGRTQSALSQQMKRLEDIVDQPLFQRTGRGVVLTH 72 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL +A++ILR +DEA + L + L G + G D+ A+ LP LL + SS +P+ Sbjct: 73 PGERLLVHAQRILRQHDEAMADLCGTGLTGTIRFGCPDDYAEVFLPPLLRQFSSQHPQAI 132 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 +++ + E LE + VDL + + +R W +P+PL Sbjct: 133 VEIVCGPTPRLLEQLEKRAVDLAMISLPDDGANDDIIRREQLVWIGYPGLEPAHFDPLPL 192 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 L D + L++A +R+AY +S+L + A V++G + DL + Sbjct: 193 ALSDPDTLDHIAACDALHRAGRDYRVAYASSSLAGLIALVRSGQAFAVMTQTAVPADLAI 252 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNEL 276 ++G LPPLP L +D + L Sbjct: 253 VNGDPRLPPLPAVGITLKFDRKRPSHL 279 >UniRef50_C5BWR0 Transcriptional regulator, LysR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BWR0_BEUC1 Length = 295 Score = 136 bits (342), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 91/288 (31%), Positives = 144/288 (50%), Gaps = 3/288 (1%) Query: 16 LRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQLL 75 LRTF+AVA +F AAA + +Q +VSQ ++RLE+ G++L R R LT++G + Sbjct: 7 LRTFLAVARTLSFTQAAAQLGISQPSVSQHVRRLEEAAGRQLLVRDTRAVSLTDNGEAMA 66 Query: 76 GYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVRVK 135 G+AR IL +DEA S + ++G L GA+D+ A LP +L +P++ L++ V Sbjct: 67 GFARSILAAHDEAASYFTGTAMRGRLRFGAADDLAIAQLPGVLRTFRQRHPQINLELTVT 126 Query: 136 RNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLVLLDDP 195 + A + L + ++DL+ P +R W L P+PL+ P Sbjct: 127 QTAALQRRLAANQLDLVFVKEPPGETSGRVVRRDRLVWIGLPGTRLPDDAPLPLITYAAP 186 Query: 196 SPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGVDG 255 S + + L +A WR+ + V AAV+AG+G+ P ++ D++VL G G Sbjct: 187 SLSKTTAVRALAEAGRTWRITCKTLEVNGVLAAVRAGIGIAVYPASLVPDDVQVLPGTLG 246 Query: 256 LPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPEGDD 303 LP L D + L +P S E + + A+ P S +AP DD Sbjct: 247 LPELGDIDITLVANPRSPKEPIEALTAAILRQPFP---STTAAPSDDD 291 >UniRef50_Q2SMF3 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SMF3_HAHCH Length = 285 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 86/253 (33%), Positives = 129/253 (50%), Gaps = 2/253 (0%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 ++ +LL+TFV V D A+ + +TQS VS Q+ RLE+ +G LF GR K LT Sbjct: 5 DISTELLQTFVTVVDSGGVLRASERLFKTQSTVSMQLSRLEERLGVALFKTVGRRKELTP 64 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +L YARKIL +EA ++ +G LTIG S D L L++ + YP + Sbjct: 65 EGETMLIYARKILDLQNEALKAIQGVQFEGELTIGISRSLVDGDLTNELSKFAMQYPLIK 124 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVT-THRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 L+VR + ++ E +E D ++ T PSA L L + W + ++ G P+ Sbjct: 125 LNVRSASSMHLHNAFEQEEFDCIIRLTQDPSA-DELVLSKAKMVWVASDKFQFDPGIPLR 183 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 + P FR + L A I W+ AY + L A+ +AV+ L V+AR + P R Sbjct: 184 MANFTTPCQFRSISEKALKAAGIVWQEAYTTNNLNALMSAVRGNLAVSARTQHALQPGTR 243 Query: 249 VLSGVDGLPPLPD 261 V+ +GLP LP+ Sbjct: 244 VVGPEEGLPELPE 256 >UniRef50_B1KPF3 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=B1KPF3_SHEWM Length = 281 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 85/274 (31%), Positives = 141/274 (51%), Gaps = 1/274 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D+D LR+F+A + +F AA +TQSAVS QM+RLE +GK LF + GRN +L+ Sbjct: 1 MDIDALRSFIAFVETGSFTRAAKQTHKTQSAVSMQMKRLEGELGKGLFEKEGRNLVLSVQ 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +L YA+ +L+ +DE ++L +++ L +G D+ AD+ILP ++ + PKL L Sbjct: 61 GRRLALYAKPLLQLHDETVATLKSPDVRPRLHLGCPDDYADSILPSIVKLLHRYLPKLEL 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 + + + ML+S E+D + T P + + L T W + E + P+P+V Sbjct: 121 QITCASSYLIRVMLDSGELDAAIVTRLPDSEEGYLLTTDVGVWIGSEEMDITAQNPLPIV 180 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 L F + L K +RL +S+ A++ VK G+G+ A D V+ Sbjct: 181 LFQKDCKFHLAAIDGLMKQGREYRLMASSSSATAIKGMVKQGIGLGAMAKLSAGQDCFVI 240 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 + LPPLP L +++ L+ + Q + Sbjct: 241 ES-ESLPPLPSIGIALVISSRAHSPLSAELAQQL 273 >UniRef50_Q11NC7 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=Q11NC7_MESSB Length = 303 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 93/260 (35%), Positives = 143/260 (55%), Gaps = 5/260 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 N+ DL+R+FV+ D +F AA V RTQSAVS Q++RLE++VG +LF R + LT Sbjct: 12 NIPTDLMRSFVSAIDGGSFTRAAEMVGRTQSAVSLQIKRLEEVVGTQLFQRDAHSLQLTG 71 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G YAR++L NDE + + + G + +GA E ++LP LL R + +P + Sbjct: 72 QGRTFAQYARRMLALNDEVLALMQSPAVSGRVRLGAPSEYTASMLPHLLGRFAQAHPNVM 131 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTH---RPSAFKALNLRTSPTHWYCAAEYILQKGEP 186 L+V + + ++ E DL+V H R + K ++ T P W+ +A++ P Sbjct: 132 LEVTSDLSENLLTRQQNGEFDLVVALHDNQRAGSGKLIH--TEPLVWFTSADHFGHMRSP 189 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +PLVL P +R ++L LN+ R++Y++S+ A AAV+AGLGVTA + D Sbjct: 190 LPLVLAPPPCIYRKLMLYQLNREAKLCRISYLSSSYTAAIAAVRAGLGVTAMVQSTLPGD 249 Query: 247 LRVLSGVDGLPPLPDTEYLL 266 +R+L DGL L E L Sbjct: 250 VRLLGSPDGLNSLGHLEVRL 269 >UniRef50_Q5FRD9 Transcriptional regulator, LysR family n=1 Tax=Gluconobacter oxydans RepID=Q5FRD9_GLUOX Length = 290 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 85/270 (31%), Positives = 141/270 (52%), Gaps = 4/270 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 ++LD L++F+AVA+ F +AA + +QS +SQ + RLE+ +G L AR ++ LT Sbjct: 1 MHLDPFHLQSFLAVAETLHFTSAAQSQGVSQSTISQHVSRLEEQLGTRLLARSTKSVRLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 E G L+G AR++L+ D S +G + +G +++ T P +L + +P L Sbjct: 61 EDGTALIGLARQLLQCEDSILSRFRQETPRGTIRLGVTEDLLLTRFPEILGTFRASHPSL 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 + + V +AY+A +L+ E+D+ R + + L T WY A + IP Sbjct: 121 QITMTVGLSAYLAPLLDQGELDVWCGMRRTTETRGQKLWTEDMRWYAPAGTEFPAEQSIP 180 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 LV D S R + + TLNKA W LA+ + +L A+ AAV+AG GVT +P + + + Sbjct: 181 LVTFPDGSVTRRLAIETLNKAGRAWHLAFTSGSLGALLAAVRAGYGVTPQPAFLRNVEHL 240 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQ 278 LP +P E++ S+ ++ AQ Sbjct: 241 SHCAPGLLPEMPQVEFI----ASTRHQTAQ 266 >UniRef50_A4XSC8 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=A4XSC8_PSEMY Length = 294 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 82/280 (29%), Positives = 142/280 (50%), Gaps = 3/280 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 L+ D+LRTFVA+AD +F AA V R+ +AVS Q++RLE+ +G+ LF R R LT Sbjct: 12 LESDVLRTFVAIADSGSFTRTAAQVFRSTAAVSLQIKRLEETLGQRLFIREARQVRLTAE 71 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LLGYAR++L+ N+EA ++ + L G + +G ++ + +LP +L + +P + + Sbjct: 72 GEVLLGYARRLLKLNEEAVANFLKPALSGRVCLGIPNDLSTRVLPGVLTTFARSHPAVQV 131 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAF---KALNLRTSPTHWYCAAEYILQKGEPI 187 DV V R+ + +++ E+DL + + + + W + + P+ Sbjct: 132 DVCVGRSVELVAKVDAGELDLTLINAGNDGLDDARGEVIYSEELVWAGRDGGLAIQRSPL 191 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL L + +R L L++ + +R+AY AA+ A L + P ++ P L Sbjct: 192 PLALANPGCAWRRTALDALDRQGVAYRIAYSCEQCAGQEAAMTADLAIAPFPRSLVKPPL 251 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 R L GLPPL + L N + + Q ++++ Sbjct: 252 RRLGAEQGLPPLGEYHIKLIRGHQRNEAVEALATQMIQAF 291 >UniRef50_Q1QUX8 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QUX8_CHRSD Length = 294 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 89/267 (33%), Positives = 139/267 (52%), Gaps = 4/267 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D DLLR FV VA+ F+AA + RTQSAVS Q++RLE +G+ LF R R+ +LT Sbjct: 1 MDTDLLRAFVTVAECEGFSAAGKVLHRTQSAVSLQIKRLEDQMGESLFERTSRSVVLTPP 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQG-VLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL YAR IL+ DEA +M + QG ++ +G S+E A T LP LL R ++ +P++ Sbjct: 61 GGRLLPYARHILKLQDEA-RRVMGVDRQGELIRLGTSEEQASTYLPELLPRFAARFPEVR 119 Query: 130 LDVRVKRNAYMAEMLESQEVDL-MVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 L+V + + + +D+ +V H P+ L L P W A + + E +P Sbjct: 120 LEVSCSISGSLVHDFQEGLLDVALVVRHGPTQTGRL-LGREPMVWVVAEDRAIDDWEILP 178 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L L + FR A L + W + Y + + + V+AGL T + + R Sbjct: 179 LALNPEGCIFRAHAFAALGPTERRWDVRYSSRSPTGINLPVQAGLAATVKTPRSVPEGCR 238 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNE 275 ++ +GLPPL E + P +++ Sbjct: 239 IVGEEEGLPPLGHVEIEMHRTPGHSSD 265 >UniRef50_A0KR40 Transcriptional regulator n=5 Tax=Gammaproteobacteria RepID=A0KR40_SHESA Length = 282 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 90/283 (31%), Positives = 148/283 (52%), Gaps = 9/283 (3%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++++ LR+FVA D +F AA +TQSAVS QM+RLEQ +GK LF + GRN +L+ Sbjct: 1 MEIEALRSFVAFVDTGSFTRAAMQTYKTQSAVSMQMKRLEQELGKTLFVKEGRNLVLSTE 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G + YA+++L+ +DE +++ + + L +G D+ A+++LP ++ + +L L Sbjct: 61 GQRFGLYAKQLLQLHDETVTTIKQTQVGAQLHLGCPDDYAESVLPRIVALLHGHIKQLDL 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 + + + ML+S ++D + T P + + L+TS W A+ L +P+P+ Sbjct: 121 QITCASSQKLRIMLDSGQLDAAIVTRLPESDEGYLLQTSKGVWVSASGSNLSDADPLPIA 180 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 L F L L K D ++L +S+ A+ A V L ++A +S L ++ Sbjct: 181 LFQKDCKFHIAALDGLMKQDRHYQLLACSSSAAALNAIVAKNLAISAMAECSVSAPLNII 240 Query: 251 -SGVDGLPPLPDTEYLL-----CYDPSSNNELAQVIYQAMESY 287 SG LPPLP L Y P N ELA+ I QA + Y Sbjct: 241 DSGT--LPPLPVVAVALVISAKAYSP-INAELAKQIAQAYQGY 280 >UniRef50_A1WMH7 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WMH7_VEREI Length = 306 Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 92/281 (32%), Positives = 135/281 (48%), Gaps = 3/281 (1%) Query: 14 DLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQ 73 +LLR FVAV + N + AA + RTQ+AVSQQ+ RLE +G +LF + R L+ G Sbjct: 10 ELLRAFVAVVECNGYTPAAHYLHRTQAAVSQQISRLEDCIGADLFEKPTRQLKLSGQGKV 69 Query: 74 LLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVR 133 LLGYAR++L N+EA L + G + +GA++ A T+LP LL S +YP + +D+ Sbjct: 70 LLGYARRLLALNNEAMEKLRPGIVSGAVRMGATNCYATTVLPLLLAEFSELYPAIHIDLE 129 Query: 134 VKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLVLLD 193 V M L DL + + + LR P W + PIPL +L Sbjct: 130 VGVAEEMQRKL-GPAFDLTINAFQGGEGNGVLLRKDPVVWAMSHRARPHLKTPIPLAVLP 188 Query: 194 DPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMM--SPDLRVLS 251 S R L A W + +S++ ++A V AGL V + +P LR+L Sbjct: 189 QGSLLRRWAQEALTAAGRRWVVVQESSSVEVLKACVLAGLAVGGFQDSTVRAAPGLRLLL 248 Query: 252 GVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQ 292 +G P LP TE L A+ +Y+ + PW+ Sbjct: 249 PEEGFPTLPSTEMWLERADRELPRAAKCLYEFLLEQLPPWE 289 >UniRef50_A1B7H3 Transcriptional regulator, LysR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B7H3_PARDP Length = 290 Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 88/278 (31%), Positives = 139/278 (50%), Gaps = 1/278 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 L+ DLL+TFV +++ F AA V RT SAVS Q++RLE +G+ LF RH R+ LT Sbjct: 9 LETDLLKTFVTISETGNFTVAAKRVFRTPSAVSMQIRRLEDQLGRALFVRHPRHVTLTAD 68 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L +A+ ILR NDEA S L+G + GA D+ LP +L+R ++ +P + + Sbjct: 69 GEAFLVHAKDILRINDEALSRFRVPQLEGRVRFGAPDDFGVRYLPAILSRFAATHPLVEV 128 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPS-AFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 +V + + +A E+ E+D+++T S + + P W A + + P+PL Sbjct: 129 EVFLSTSVILARRFEAAEIDMILTVSAQSDPAPGQVIHSEPLVWVGARDGMAFSRTPVPL 188 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 L P+R LA L+KA +R+AY + AAV A L + PV ++ R Sbjct: 189 ALSSHGCPWRAAALAALDKASRRYRIAYTSEAAAGQLAAVMADLAIAPLPVSLVDEQHRR 248 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 L+ +G + + L +P + ES+ Sbjct: 249 LTEKEGFGAIGSYQLRLQKNPDIGSAAQAFADHVRESF 286 >UniRef50_C1SL97 Transcriptional regulator, COG0583 n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SL97_9BACT Length = 281 Score = 133 bits (335), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 87/279 (31%), Positives = 145/279 (51%), Gaps = 4/279 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 ++L ++LL+TF+ V + F AA + +TQSAVS QM+RL + VG+ LF R G+ LT Sbjct: 1 MDLSIELLKTFIVVVEEMNFTRAAERLYKTQSAVSLQMKRLSEEVGEPLFCRKGKTLALT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 E G +L YA +IL+ ++EAC L S + G +T+G SDE I +L + YP + Sbjct: 61 EKGEKLRMYAVRILKSHEEACIGLSGSGVAGNITLGISDEYTPIIFTKILAGFAERYPNV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 ++ V K + + + ++ +D+ + S+ L LR P W + Y G + Sbjct: 121 SVGVVCKPSPELKKRVDENLLDIAILAEYESS--GLLLRYEPMMWMASRTYAYDGG-VVQ 177 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD-L 247 L + D R+ + L KA +P+R+AY + +R+AVK+G+ V+ + D Sbjct: 178 LAVYPDYCIARNTGIEYLAKAGVPYRIAYETESSRLLRSAVKSGMAVSPVLSRVYRDDHY 237 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 R L +G P LP L N+E+A+ + + ++ Sbjct: 238 RQLGSEEGFPELPHIPVTLHRSKDRNDEVAEYLLEHIKK 276 >UniRef50_A8G7X5 Transcriptional regulator, LysR family n=1 Tax=Serratia proteamaculans 568 RepID=A8G7X5_SERP5 Length = 284 Score = 133 bits (334), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 94/254 (37%), Positives = 134/254 (52%), Gaps = 2/254 (0%) Query: 15 LLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQL 74 LL +FVAV D N+F AA V +QS VSQQ++RLE+++GK LF R LLTE G++L Sbjct: 11 LLLSFVAVCDSNSFTRAAERVFLSQSTVSQQVRRLEEMLGKPLFERSSHQVLLTEEGVKL 70 Query: 75 LGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVRV 134 L YAR+I+ N+EA +L GVL +G ++ A LL S +P L LDV Sbjct: 71 LSYARRIIALNEEAHDALTGIWRDGVLRLGMPEDFAAPTTE-LLAEFSRAHPHLRLDVTS 129 Query: 135 KRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLVLLDD 194 +A + +E+DL++ R S R P W + + + P+PL + Sbjct: 130 GLSADLHSAYAREELDLILVKQRRSQ-PPRAARPEPLLWLDSLAFPAIEQSPVPLAVFPL 188 Query: 195 PSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGVD 254 +RD + L+ WR+ Y +++L A+ AA AGLGVT P P RVL + Sbjct: 189 NGLYRDDLCQALDNLGKRWRIGYSSASLAALTAASAAGLGVTLLPAGCRLPSHRVLGSAE 248 Query: 255 GLPPLPDTEYLLCY 268 GLPP+ + E L Y Sbjct: 249 GLPPIDNIELALYY 262 >UniRef50_Q7W0I5 Probable LysR-family transcriptional regulator n=4 Tax=Proteobacteria RepID=Q7W0I5_BORPE Length = 306 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 91/274 (33%), Positives = 138/274 (50%), Gaps = 7/274 (2%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +DLDLL +FV+V D F A V RTQS VSQQ+++LE +G LF R GR LTE Sbjct: 23 VDLDLLHSFVSVVDAGGFTRAGERVHRTQSTVSQQIRKLEDALGCALFIREGRGVRLTED 82 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LLGYAR++L ++E + V+ +G D+ A T L ++ + +P++ L Sbjct: 83 GERLLGYARRMLALSNEIREVVSGERRLEVVRLGLPDDLAVTRLTHMVADFARRHPQVRL 142 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 +R +A + E+DL++ P A + HW CAA +PI LV Sbjct: 143 SMRCDLSANLHRAQARGELDLVLLKREPGAGPSRAAWPERLHWLCAAGGPATLPDPIALV 202 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 +R+ + L A WR+AY + L ++AAV+ GLGV +P + Sbjct: 203 AFPQGCQYRNRAIHALESAGRRWRIAYESPNLSGLQAAVEGGLGVALLEQRCQTP---AM 259 Query: 251 SGVDGLPPLPD-TEYLLCYDPSSN---NELAQVI 280 + D L P P +E LC + + +ELA++I Sbjct: 260 ARCDALLPRPAPSELALCMSDTGSRAVHELARLI 293 >UniRef50_B5ZG57 Transcriptional regulator, LysR family n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZG57_GLUDA Length = 291 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 85/257 (33%), Positives = 134/257 (52%), Gaps = 5/257 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +LD LR+F+AVA+ F +AA + QS VSQ + RLEQ V + L R + LT+ Sbjct: 6 DLDPQQLRSFLAVAETLHFTSAARRLGIVQSTVSQHVSRLEQAVNRTLLVRSTKQVTLTQ 65 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G ++ AR IL D A + S ++G + +G S++ T LP +L YPK+ Sbjct: 66 DGHMMIALARDILSAQDRALTWFDRSVIRGYIRLGISEDLTMTRLPEILGIFREKYPKVD 125 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 + +RV + + L++ VDL+ T R + + P W+ E G +PL Sbjct: 126 VHLRVGLSGSLQNDLDTGSVDLLCTKRRIGDARGTTIWREPLTWFGNWE----PGTALPL 181 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 V+ +P+ R + L LN A+IPW +A+ + L A+ AAV+AG GVTA+ + D R Sbjct: 182 VVFPEPAITRQLALECLNAAEIPWYVAFTSENLTALLAAVRAGYGVTAQSSFLRQYD-RS 240 Query: 250 LSGVDGLPPLPDTEYLL 266 L + LP D ++++ Sbjct: 241 LPVTENLPETADVDFIV 257 >UniRef50_B1YYS6 Transcriptional regulator, LysR family n=41 Tax=Burkholderiaceae RepID=B1YYS6_BURA4 Length = 291 Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 87/265 (32%), Positives = 140/265 (52%), Gaps = 2/265 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD D+L T VAVA+ AA AV R+QSAVS Q++ LE +G+ LF R R+ +LT Sbjct: 4 LDHDVLATVVAVAETGNMTRAAEAVNRSQSAVSMQIKSLEDAIGRPLFVRKPRSIVLTRE 63 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LLG+AR++L DEA ++++ + G + IG D+ A ++LP +L + S+ YPK+ + Sbjct: 64 GEVLLGFARRMLALRDEAWAAVVRPEVTGKVVIGVPDDYASSLLPSVLKKFSATYPKVEI 123 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEY-ILQKGEPIPL 189 V ++ +A +L+ VDL+ T R +R P W + + P+P+ Sbjct: 124 QVIGLPSSALAPLLKEGTVDLVCGT-RIKGLSGDFIRHEPMAWAAMTNGPRVWEERPLPI 182 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 + S R+ + +L +A +P+R +Y + +L + + V+AGL V + L + Sbjct: 183 AVFMPGSVARENAIRSLERAKLPFRTSYESPSLLGLLSMVEAGLAVAPLARCAIPAQLSM 242 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNN 274 L GLP LP E +L S Sbjct: 243 LGRSHGLPDLPPLELILARSTKSKR 267 >UniRef50_B4EPV1 LysR family regulatory protein n=7 Tax=Burkholderia RepID=B4EPV1_BURCJ Length = 293 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 89/260 (34%), Positives = 132/260 (50%), Gaps = 2/260 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD LL TFVAVAD+ +F A + +QSAVS Q+ RLEQ V + L R+ R+ LT H Sbjct: 6 LDTALLHTFVAVADVRSFTGAGRRLNLSQSAVSAQIVRLEQQVDQTLLVRNTRSVTLTPH 65 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGV-LTIGASDESADTILPFLLNRVSSVYPKLA 129 G LLGYAR +L + EA + L N V L IG S++ A LP L+ R + L Sbjct: 66 GETLLGYARAMLNLSAEARARLGTGNAVDVKLRIGVSEDFAGGWLPDLMRRHGAARRGLR 125 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 L++ V + E DL++ + + L P W A L +G+ +PL Sbjct: 126 LELVVDIGDSLFRRHADGEFDLVIGSRCSHSGHGATLWQEPLVWAFARHEPLPEGD-VPL 184 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 DP P+R + L A + +R+A + ++ +R +AG+ + P + LR Sbjct: 185 ACFPDPCPYRGAAITALALAGMRYRIACESPSVTGIRTFARAGIAIAPVPRSAIDDTLRE 244 Query: 250 LSGVDGLPPLPDTEYLLCYD 269 L DGLP LP+ E+++ +D Sbjct: 245 LGLPDGLPALPEMEFVMMHD 264 >UniRef50_A1S908 Putative LysR-family transcriptional regulator n=1 Tax=Shewanella amazonensis SB2B RepID=A1S908_SHEAM Length = 307 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 84/230 (36%), Positives = 127/230 (55%), Gaps = 4/230 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD LLR FVAVAD +F AAAA TQS VSQQ++RLEQ +G EL +R GR + T Sbjct: 18 LDPVLLRAFVAVADSGSFTRAAAATHLTQSTVSQQLKRLEQQLGCELLSRKGRYAMPTAD 77 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LLGYAR+IL EA M +L + +++ A T L +L ++ + +P + L Sbjct: 78 GERLLGYARQILALMAEAG---MTPAQPPLLRLAVAEDFAGTALMPILKKLITRFPSVKL 134 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEY-ILQKGEPIPL 189 +V+ + + + + V+L + R A W AA++ ++ GEP+PL Sbjct: 135 EVQSGLSKPLYQAFQEGVVELALIKQRQGEHPAKACWPEALSWLAAADWQAVKAGEPVPL 194 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARP 239 + +R+ + L++A IPWRL Y +++L V AV AG+GV+ P Sbjct: 195 IAFPAGGLYRNEMAQLLDEAGIPWRLVYSSNSLEGVLCAVAAGMGVSLLP 244 >UniRef50_C5CP23 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=C5CP23_VARPS Length = 301 Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 92/294 (31%), Positives = 135/294 (45%), Gaps = 7/294 (2%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +N D LL+ F AV N F AA + TQSAVS Q++RLE+LVG+ LF R R LT Sbjct: 1 MNFDTGLLQAFTAVHRANGFTRAAEQLHLTQSAVSHQIRRLEELVGRPLFHRTTRRLRLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L +A +IL+ D S ++G + G + LP LL + + P + Sbjct: 61 ADGEDFLRHAERILQAQDALARHFRCSPIEGTVRFGVPESFMSEGLPQLLQQFARSCPNV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 L+V V +A M+ +E+DL V + LR P W A + G +P Sbjct: 121 RLEVSVGLTLDLATMVRERELDLAVVVSVSGEVEGTLLRRLPMVWAAAEGFERTDGASLP 180 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L P R + + LN+A IPW A+ + +L +R A +GL V + + P + Sbjct: 181 LAYSPPPCVCRQVSIDALNQAGIPWHGAFSSHSLQDLRTAALSGLAVATFTRDNLRPGMA 240 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNN-------ELAQVIYQAMESYHNPWQYSP 295 VL GLP LP ++ L Y EL ++I QA ++ + P Sbjct: 241 VLDERHGLPALPMLDFTLAYGEGDAGERSPAVAELGRLIEQAEWAHRDKAARRP 294 >UniRef50_C6AY75 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=C6AY75_RHILS Length = 285 Score = 130 bits (326), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 72/228 (31%), Positives = 133/228 (58%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 +++LD LLR F+ VA++ T AA + RTQ+AVS Q+++LE+LVG LF+R + L Sbjct: 1 MLDLDSYLLRAFLTVAEIGTVNGAAVKLNRTQAAVSMQIRKLEELVGVTLFSRSSKGLEL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T HG +L YAR+++ +DE L ++ + +G ++ A L +L+ + PK Sbjct: 61 TSHGQIMLAYAREMVALSDEVGKRLTGKMIEDRIRLGVVEDFAAGHLIDILSAFRAQNPK 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + +D+ V+ N +A + E +++DL+V + K + T W ++++ +P+ Sbjct: 121 VEIDIIVEPNRRLASLFEDRKLDLVVCDITCLSRKPTLIWTEYLMWTVRSDFVADTEKPL 180 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGV 235 P+++ ++ P+ +A L++ +I W+ A VASTL A+ AV+ G+G+ Sbjct: 181 PIIMFEEECPWTLPTIAALSQRNIKWKTACVASTLVAMATAVRVGIGI 228 >UniRef50_Q0BQ99 Transcriptional regulators, LysR family n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BQ99_GRABC Length = 300 Score = 130 bits (326), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 93/286 (32%), Positives = 145/286 (50%), Gaps = 14/286 (4%) Query: 1 MISANRPIIN---LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKEL 57 M+ +P +N LDLDLLR F VA F AA + TQSA+S +++RLE L+ + + Sbjct: 1 MLPQEQPEVNYPDLDLDLLRCFACVAAERGFTAAGQVMGLTQSAISLKIKRLEDLINRRV 60 Query: 58 FARHGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFL 117 F R R+ LT G LL YA ++L NDEA L+ S ++G L +G +D L + Sbjct: 61 FDRSSRHLALTPDGDILLAYAHRLLSLNDEAVRRLVASPIKGHLRLGVADHFLPHHLAQI 120 Query: 118 LNRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAA 177 + R YP + L++ V R A + + DL++ R + + T W A Sbjct: 121 VGRFQRTYPAVRLEIEVGRCAELRTACDEGRFDLVIGRRRAGDTMGMPIWTETMVWVAAN 180 Query: 178 EYIL-QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 ++ + ++ +P+PL L FR+ L L++A IP L Y +++L + A + GL + Sbjct: 181 DFRMPERDKPLPLATLSTGCMFRERALDVLSRARIPHELRYTSTSLLGIIAFAQEGLCII 240 Query: 237 ARPVEMMSPDLRVLSG---VDGLPPLPDTEYLLCYDPSSNN-ELAQ 278 P+ + V SG +D LP L ++E + D S N ELAQ Sbjct: 241 --PIGRSN----VPSGLKEIDSLPVLGNSEIAVFGDISDENLELAQ 280 >UniRef50_B9R5T3 LysR substrate binding domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R5T3_9RHOB Length = 303 Score = 130 bits (326), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 83/267 (31%), Positives = 141/267 (52%), Gaps = 3/267 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D+DL RTF+ +A+ ++F+ A+ + RT SAVS Q+++LE ++G +FAR GR LT Sbjct: 12 IDMDLYRTFLVIAETSSFSKASDLIGRTPSAVSMQIKKLETILGVAVFAREGRAVRLTPE 71 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LLGYAR+IL N+EA S + +++G + GA + LP L+R + +P + + Sbjct: 72 GEALLGYARRILMLNEEAVSLFVSPSVEGEVRFGAPADFGTRFLPNFLSRFARSHPGVNV 131 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALN---LRTSPTHWYCAAEYILQKGEPI 187 DV + ++ + + + E+DL+++T RP + + P W I +P+ Sbjct: 132 DVHLDGSSALDDKIRKGELDLVLSTVRPGVPMPTGTDVVFSEPLVWVGLEGGIAYDRDPL 191 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL + P+R L+ A P+R++Y + AA+ A L V P ++ P L Sbjct: 192 PLAVSTPGCPWRRAARIALDGAQKPYRISYTSFHSAGQEAALLADLAVAPFPASVVEPPL 251 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNN 274 +VL GLP + D ++ P + Sbjct: 252 QVLDDRHGLPKIGDYHIVMKQRPRAGR 278 >UniRef50_A3Y8R3 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y8R3_9GAMM Length = 288 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 79/280 (28%), Positives = 137/280 (48%), Gaps = 1/280 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD++ L TFV + D AA A+ RTQ+AVS Q+++LE++ GK L R LT Sbjct: 4 LDINQLATFVTIVDAGNITKAAIALHRTQAAVSIQLKKLEEVAGKSLLNRGYNQFTLTRE 63 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LL YARKIL ++EA + + +L+GV+ G D A + L + +PK+ + Sbjct: 64 GEVLLSYARKILSLSEEALNLINDDDLEGVVRFGIPDGYARAFIQRPLRQFIDRFPKVKI 123 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 ++ + + + L + E+DL++ TH P A +R W A + L +P+PL Sbjct: 124 QIKNDNSHNLYKSLHAGELDLILVTHDPLASGGDLIRREKICWVKAKDLTLDMNKPLPLA 183 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 L + +R ++ LN ++ W +++ + A+ GL ++A ++ + ++ Sbjct: 184 LYEQGCSYRKGIIDALNHVELDWFVSFECQGVTGFDIAISNGLAISALAESLVKDEWSII 243 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM-ESYHN 289 LP L + E L P ++ + Q + ES N Sbjct: 244 KPASNLPDLGEVEIALHTRPGEIDDAIRCFSQVLVESISN 283 >UniRef50_UPI0001B5968A HTH-type transcriptional regulator pecT n=1 Tax=Brucella neotomae 5K33 RepID=UPI0001B5968A Length = 317 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 71/217 (32%), Positives = 127/217 (58%), Gaps = 3/217 (1%) Query: 7 PIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKL 66 P+ LD+D+LRTFVA+AD +F++AA AV RT SAVS Q+++LE+ +G +F R R+ Sbjct: 18 PLPMLDIDVLRTFVAIADTGSFSSAANAVFRTPSAVSMQIKKLEEQLGVAVFDRDARSVT 77 Query: 67 LTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYP 126 LT G LLGYAR++L N EA S + + G++ +G+ D+ + +LP +L R + +P Sbjct: 78 LTGDGEILLGYARRLLALNREAVSKFVAPTVTGIVRLGSPDDIGECVLPLVLKRFAETHP 137 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLM---VTTHRPSAFKALNLRTSPTHWYCAAEYILQK 183 + +DV + +++ + + L+ + +D+ ++ P+ + W A + Sbjct: 138 GVTVDVVIDQSSNLRKRLDERRLDVTLVNISQAVPTRDDVEIMLDEELVWARAKCGTAYR 197 Query: 184 GEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVAS 220 +P+PL + ++ +R L L K+ P+R+AY++S Sbjct: 198 RDPLPLSIWEEGCAWRANALQALEKSGRPYRVAYMSS 234 >UniRef50_Q48I21 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=Q48I21_PSE14 Length = 297 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 78/254 (30%), Positives = 126/254 (49%), Gaps = 1/254 (0%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +LD D L FVAV D F A + +TQ+AVS + RLE VG++L R R LTE Sbjct: 3 HLDTDCLAAFVAVIDCGGFTTAGERIGKTQAAVSLMLGRLESRVGRKLLERSRRGVTLTE 62 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 HG +L+GYAR+I DEA ++L + IG D+ +++ L+ + +P L Sbjct: 63 HGERLIGYARRIQMLEDEALAALDCGQEATRVRIGMPDDYLESLGCELMQAFTLRHPHLQ 122 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 +++ ++ + M+ +DL + T + + LR P W A + ++ + +PL Sbjct: 123 VEIICDFSSRLESMITEGSIDLAIITRSGTKVQGELLRCEPMLWCAAPGHFPEQQKVLPL 182 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 L + R ++ L+ PWR+ +S LP V +V+ G VT P ++ R+ Sbjct: 183 SLFTESCRARPQIIEALDMLGTPWRVVSSSSHLPGVMHSVRLGTSVTVLPASVVPSGWRI 242 Query: 250 LSGVDGLPPLPDTE 263 L + LP LP E Sbjct: 243 LKS-EQLPRLPSIE 255 >UniRef50_B9JX79 Transcriptional regulator LysR family n=1 Tax=Agrobacterium vitis S4 RepID=B9JX79_AGRVS Length = 324 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 83/272 (30%), Positives = 141/272 (51%), Gaps = 18/272 (6%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD D+LRTFVA++++ +F AAA V RT SAVS Q+++LE +G LF R R+ LT H Sbjct: 34 LDNDVLRTFVAISEVGSFTAAADMVFRTPSAVSMQIKKLEDQLGVSLFRRDARSVTLTPH 93 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LL YA++IL N+EA + + + GV+ +G+ D+ + +LP +L ++ +P LA+ Sbjct: 94 GALLLSYAKRILALNNEAVARFLAPEMNGVVRLGSPDDIGELVLPGILTHLARTWPHLAI 153 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGE----- 185 +V + + + + + + +D+ + F LN + +E ++ G+ Sbjct: 154 EVTIAGSVELRKAVNEKRLDVTL-------FNFLNGIAADPTMTVMSEKLVWAGKKHGQA 206 Query: 186 ----PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVE 241 P+PL + D+ +R + L + +R+AY AA++A + V Sbjct: 207 HLKTPLPLSVWDESCVWRKRAMTELTRRGKEFRIAYFCGHHVGQYAAIRADIAVAPLARF 266 Query: 242 MMSPDLRVLSGVDGLPPLPDTEYLL--CYDPS 271 ++ D+ L+ DGLP L E L C D S Sbjct: 267 LLQEDMVELTERDGLPDLGSYEVGLAVCEDAS 298 >UniRef50_B0UBR3 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UBR3_METS4 Length = 296 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 83/254 (32%), Positives = 127/254 (50%), Gaps = 2/254 (0%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR-HGRNKL 66 ++N+D+DLLRT +AVAD F A + RTQSAVS Q++RLEQ+VG+ L R GR Sbjct: 3 LVNVDIDLLRTLLAVADAKNFTLAGERLLRTQSAVSLQVKRLEQVVGQRLVERGSGREIR 62 Query: 67 LTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYP 126 LTE G + YA +IL+ ND + VL +G D+ A ILP ++ +S Sbjct: 63 LTEAGEMVRRYAIEILKLNDALVREVAHRPETNVLRVGTPDDYAQLILPEIIGTLSRENR 122 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEP 186 + V + ++ M++S ++DL + T S + + L P W A + Sbjct: 123 HVEFHVVSDLSVNLSRMVDSGDLDLALVTW-ASGIQGIRLAEEPLAWVAAPHSAAASLDT 181 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +PL L RDM + L++ WR+A+ A+ +R A+ G + P+ + D Sbjct: 182 LPLALFPQGCRVRDMAVEALDRIGRRWRVAFSANQFTPLRTAITHGEAIGVLPLRAVPKD 241 Query: 247 LRVLSGVDGLPPLP 260 L + GLP LP Sbjct: 242 LVQVGPEHGLPELP 255 >UniRef50_B9JHY5 Transcriptional regulator protein n=2 Tax=Agrobacterium RepID=B9JHY5_AGRRK Length = 298 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 83/251 (33%), Positives = 130/251 (51%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 NLD D L +FVAVA+ +F AAA + RTQ+AVS + + E+ + LF R R LT Sbjct: 3 NLDSDALASFVAVAETGSFTAAAERLGRTQAAVSMAIGKWEERLDLRLFDRGHRRVTLTP 62 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LLGYAR+I DEA ++L+ + + +G D+ L+ R PK++ Sbjct: 63 IGERLLGYARRIRAIEDEALATLLEGRNESRVRLGMPDDYLTLFGTALMQRFVPQCPKVS 122 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 LD++ + + M+ES+E+D+ + T K +R W AA+ ++ I L Sbjct: 123 LDLQYDFSHRLEYMVESRELDIAIITQNAVEPKGEIIRLEKQVWCAAADRYPERENCIQL 182 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 L + R VL+ L++AD WR+ Y +S + ++ AV +G +T P + R Sbjct: 183 ALFPEGCRARPQVLSALDRADRRWRIVYSSSDIAGIQLAVHSGDLLTVLPESAVPASWRK 242 Query: 250 LSGVDGLPPLP 260 L DG+P LP Sbjct: 243 LGPEDGMPELP 253 >UniRef50_A4YNE0 Putative transriptional regulatory protein, LysR family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YNE0_BRASO Length = 286 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 85/267 (31%), Positives = 129/267 (48%), Gaps = 4/267 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARH-GRNKLL 67 +N D+D LR+F+ +AD +F+ AA V R+QS +SQQM +LE VGK L R GR L Sbjct: 1 MNFDIDCLRSFLVIADTMSFSRAAETVGRSQSTISQQMTKLEMQVGKPLLTRRKGRVLEL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G + + YAR+IL+ NDEA +S+ L G + +G + L R P Sbjct: 61 TPEGDRFVQYARRILQLNDEAYASMRDDVLVGFVRLGVPLDFFGRDFTTWLARFKRKNPM 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + ++V ++ + + E DL A ++ T W Y I Sbjct: 121 VGIEVEANQSENLMKRSARGEFDLAFFKQDVGARAGTSMLTEQLVWVSGPNYSPDDAS-I 179 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PLVL + +R L++L + D W L++V+ + ++AA GLG+T ++ P L Sbjct: 180 PLVLFPEGCAYRRFALSSLKQHDRRWHLSFVSPSFECLKAATLEGLGITVLARALVQPPL 239 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNN 274 R++ GLP LP E L Y N Sbjct: 240 RIIRQDLGLPRLPPVE--LAYARGRTN 264 >UniRef50_Q3JTX1 Transcriptional regulator, LysR family n=37 Tax=Burkholderia RepID=Q3JTX1_BURP1 Length = 367 Score = 127 bits (319), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 87/254 (34%), Positives = 134/254 (52%), Gaps = 3/254 (1%) Query: 14 DLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQ 73 +LLR+FVAVA +F AA+ V +QS VSQ ++RLE+L+ + LF R RN L G Sbjct: 92 ELLRSFVAVAQTGSFTAASERVSLSQSTVSQHIRRLEELLDRPLFERDTRNVRLAPSGEA 151 Query: 74 LLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVR 133 L YA +IL DEA +S+ L G + +G S++ A T L L P++ L++ Sbjct: 152 LFRYAVRILALMDEAVASVCGPPLSGKVRLGLSEDFALTHLTAALASFVQRNPEVELEIA 211 Query: 134 VKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI-PLVLL 192 + + + L++ DL+ + + +RT P +W L EP+ PL L Sbjct: 212 TGLSGDLFDALDAGRHDLVFAKRIAGSRRGRVIRTEPLYWCAGPASPLTGREPVLPLALH 271 Query: 193 DDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSG 252 PS R VL TL+ P+R+A ++++ +RAA AGLG++A ++ L L Sbjct: 272 PQPSVSRQRVLETLDAIGRPYRIAVASTSIAVLRAAASAGLGISAFAGYVIPHGLAKLEA 331 Query: 253 VDGLPPLPDTEYLL 266 GLPPL + EY++ Sbjct: 332 --GLPPLGELEYVI 343 >UniRef50_A3VR51 Probable transcriptional regulator n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VR51_9PROT Length = 307 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 95/298 (31%), Positives = 145/298 (48%), Gaps = 5/298 (1%) Query: 2 ISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARH 61 ++ N PI +LD LLR FV++ D TFA AAA + RTQSA+S Q++RLE +V LF R+ Sbjct: 1 MNRNAPIRDLDPSLLRAFVSIVDAGTFARAAARLNRTQSALSMQVKRLEDVVDATLFDRN 60 Query: 62 GRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRV 121 R LT G +LL YAR+I+ ND A SL L G + +G ++ A LP +L++ Sbjct: 61 NRPPTLTIAGEKLLAYAREIVAVNDAALESLRSDKLSGRVRLGLMEDFATFHLPPMLSKF 120 Query: 122 SSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYIL 181 ++P + ++V + + EM+ ++ ++V T R P W A Sbjct: 121 RRLFPDVLIEVETGLTSELKEMVGARFDAVIVMTPENGTEGEFLYRGKPL-WGGAPGVDP 179 Query: 182 QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVE 241 E +PL L FR L++A+ W +A+++ AV A V+ G V+ Sbjct: 180 VTHEVLPLALYWPGCFFRKWATEALDRAERRWHAQLIANSIGAVAAEVREGGCVSVFKDL 239 Query: 242 MMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSN----NELAQVIYQAMESYHNPWQYSP 295 L L DGLP LP+ E L PS++ A + + + S H+ P Sbjct: 240 TWPEGLCRLGCADGLPDLPNYELRLLRAPSADRGAAKAFADFLGEEVRSLHSDLDQRP 297 >UniRef50_Q28WA0 Transcriptional regulator, LysR family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28WA0_JANSC Length = 291 Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 80/264 (30%), Positives = 131/264 (49%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD DL+R F+AV + + A + RTQSA+S Q+++LE +G+ +F R R LTE Sbjct: 5 LDSDLMRGFLAVVETGSLTRAGHRLGRTQSAISMQIRKLEDSLGQSVFVREPRGVRLTER 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G QLL YA++++ DEA +L L G + +G DE +LP +L+ S +P+ + Sbjct: 65 GKQLLPYAQRVVGLLDEAAIALREKPLSGPVRVGVPDEYIQGVLPAVLSAFSQRHPETQV 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 +R +A E L S ++DL V S + L PT W + + P+P+ Sbjct: 125 TLRCDFSAPQLEALNSDKIDLAVIYEGYSTDEVEVLAVDPTVWVTSISHAQHLHRPLPIS 184 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 + RD L +L + IP+ A+ T +R+AV G+ V + P R L Sbjct: 185 IYFSSDWCRDFALHSLEQIGIPYFAAFECDTSGGMRSAVSNGIAVAPLARSSIPPGCREL 244 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNN 274 + DG + + +L +P+ ++ Sbjct: 245 TAEDGFMGVDNARVVLRRNPAGSS 268 >UniRef50_A1B0T7 Transcriptional regulator, LysR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B0T7_PARDP Length = 297 Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 86/262 (32%), Positives = 132/262 (50%), Gaps = 1/262 (0%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 I NL DLLRTF+ V +L + A AA+ R+Q A+S Q++RLE+LV L + GR L Sbjct: 4 ITNLPTDLLRTFITVVELGGHSRAGAALGRSQPAISLQIRRLEELVRAPLLTQEGRAILP 63 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G LL YAR+++R NDEA S S+ GVL IG + A L L R + + Sbjct: 64 TLAGEALLSYAREMVRINDEAVSYFHRSDKTGVLRIGLPTDYAVAFLQGTLTRYIRGHAE 123 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALN-LRTSPTHWYCAAEYILQKGEP 186 + L+V + + + L S ++D++V + L+ + T W A ++ L P Sbjct: 124 VELEVHCDLSRELHQHLRSDDLDIIVAVMPTARMPYLSRMWTEQPIWAAAEDFQLPAHAP 183 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +PL + +R ++ L+ + WR+ Y + ++ AV+ GL VTA M Sbjct: 184 VPLGAHPEGCDYRARMIQALDAVERRWRIVYTGPGISGLQNAVRNGLCVTALTRATMLSG 243 Query: 247 LRVLSGVDGLPPLPDTEYLLCY 268 +R+L+ DG P L L Y Sbjct: 244 MRMLTEADGFPALEPLRVGLFY 265 >UniRef50_Q4KF30 Transcriptional regulator, LysR family n=5 Tax=Proteobacteria RepID=Q4KF30_PSEF5 Length = 286 Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 93/277 (33%), Positives = 136/277 (49%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 D LLRTFVAV D F+ AA + TQSAVS ++RLEQ VGK L R R++ LT Sbjct: 2 FDALLLRTFVAVVDEQGFSRAALKLHLTQSAVSGHLRRLEQQVGKPLLQRTTRSQQLTAD 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +L+ YAR IL N +A + L G + +G S++ AD L L + YP + L Sbjct: 62 GERLMAYARAILALNRDAWTELTRVPFHGRVGVGLSEDFADPRLLRALQDFAGRYPGIRL 121 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 DV+V + ++L + L+V + +A L + P W + +P+PL Sbjct: 122 DVQVGIPGTLLDLLAQGNLQLVVGSLCETAEPGRLLWSEPLVWAGLVQPAGLLPDPLPLA 181 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 L +P P+R L L +A I R + S+ A+RAAV +G + + L L Sbjct: 182 LFPEPCPYRAAALGRLAQAGIAQRTVMLCSSNWALRAAVLSGFAIAPMAASQLGAGLCTL 241 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 GLPPLPD +Y L P ++ + + + Y Sbjct: 242 GEEYGLPPLPDAQYRLFTAPEADQTVLAALSEVFVEY 278 >UniRef50_UPI000197C29B LysR family transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C29B Length = 291 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 76/269 (28%), Positives = 134/269 (49%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 L+L LL+TFV VA+ F A+ + TQS +SQQ+QRLE LV + LF R R LTE Sbjct: 11 LNLVLLKTFVTVAETGNFTVASQHLNSTQSTLSQQIQRLEALVSQPLFVRGHRILTLTET 70 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LL YA+ IL ND + + + + +G ++ A + L P + L Sbjct: 71 GEVLLSYAKNILALNDTFFMKITGNAVIQTIRLGFPEDLASGQVTPTLAAFMQANPNVRL 130 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 +V + + + + E+DL++ + FK+ P W + +Y + +PLV Sbjct: 131 EVTSGLSRQLHQRYQHGELDLIIVKQKKGEFKSDYHWPEPLCWLTSNQYKRLSNDSVPLV 190 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 + + +R+ + L+ PW + Y S+L +++A+ GLGV+ P+ P R+L Sbjct: 191 VFPENGLYRNDMFKLLDSEQRPWHITYTCSSLAGIQSAIADGLGVSLLPLRAKLPQHRIL 250 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQV 279 + +G P + E + + ++++ + Q+ Sbjct: 251 TEEEGFPAAQEMEIAMHFHANTSDIITQL 279 >UniRef50_D1RXQ6 Transcriptional regulatory protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RXQ6_SEROD Length = 330 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 93/259 (35%), Positives = 134/259 (51%), Gaps = 2/259 (0%) Query: 14 DLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQ 73 LL +FVAV D +F AA V +QS VSQQ++RLE+++GK LF R LLTE G++ Sbjct: 56 QLLLSFVAVCDSGSFTRAADRVFLSQSTVSQQVRRLEEMLGKPLFERSSHQVLLTEEGVK 115 Query: 74 LLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVR 133 LL YAR+I+ N+EA +L GVL +G ++ A LL S +P L LDV Sbjct: 116 LLSYARRIIALNEEAHDALTGIWRDGVLRLGMPEDFAAPTTE-LLAEFSRAHPHLRLDVA 174 Query: 134 VKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLVLLD 193 +A + +E+DL++ R S R P W + + + P+PL + Sbjct: 175 SGLSADLHSAYAREELDLILVKQRRSQ-PPRAARPEPLLWLDSLAFPAIEQSPVPLAVFP 233 Query: 194 DPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGV 253 +R+ + L+ WR+ Y +++L A+ AA AGLGVT P P RVL Sbjct: 234 LNGLYREELCQALDNLGKRWRIGYSSASLAALTAASAAGLGVTLLPAGCRLPSHRVLGIA 293 Query: 254 DGLPPLPDTEYLLCYDPSS 272 +GLPP+ E L Y S+ Sbjct: 294 EGLPPVGSFELALYYRDSA 312 >UniRef50_Q0B2N7 Transcriptional regulator, LysR family n=9 Tax=Burkholderiaceae RepID=Q0B2N7_BURCM Length = 302 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 94/299 (31%), Positives = 137/299 (45%), Gaps = 9/299 (3%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR-HGRNKLLT 68 NLD LLRTFV V+ +T AAA A+ TQ A+SQQ++RLE+ G+ LF R GR K LT Sbjct: 4 NLDTSLLRTFVTVSRRSTMTAAAHALHLTQGAISQQIKRLEECFGQRLFDRSQGRLK-LT 62 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G +LL A +++R ND + GVL +GA + T L + + YP + Sbjct: 63 AAGERLLERAEQLVRLNDRIWDDMSEPVFAGVLRVGAPSDLVGTYLAGVFKAFAQHYPHV 122 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 + + + ++ L VD+ V S LRT P W A P+ Sbjct: 123 EIVLVNLASVELSAALLDGRVDIAVIEQPASEPGGERLRTEPLAWVGAVGGNAHLKRPLA 182 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 + ++ D FR + L + +I WR + + A +A V+ + VTA + DL+ Sbjct: 183 VSIVSDACVFRPALFDALTQHEIAWRTVFENGDIEATKATVRMDMAVTAWLASTVPSDLQ 242 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPEGDDSLLI 307 +L GLP LPD L PS L +E N + + AP G D L+ Sbjct: 243 MLRPAQGLPTLPDFAVTLHLPPSGTTPL-------VEEMANFIRNGFLHAPSGGDGRLL 294 >UniRef50_A3XB80 Transcriptional regulatory protein, LysR family protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XB80_9RHOB Length = 305 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 94/289 (32%), Positives = 147/289 (50%), Gaps = 7/289 (2%) Query: 3 SANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHG 62 +ANR L+LD LR+FVA+ + +F AAA V ++ SAVS Q+ +LE+L+G L R Sbjct: 16 TANR---TLNLDALRSFVAICETGSFRRAAARVHKSPSAVSLQIGKLEELLGVRLLDRDA 72 Query: 63 RNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVS 122 R+ LT+ G LLG AR+IL NDE + S L G L + A + +++P LL R++ Sbjct: 73 RHVALTDQGGTLLGQARRILGMNDETLALFRRSALVGRLCLSAPHDLGVSLVPGLLRRLA 132 Query: 123 SVYPKLALDVRVKRNAYMAEMLESQEVDL-MVTTHRPSAFKALNLRTSPTHWYCAAEYIL 181 V+P + +DVR+ + + + + +L + SA +A +L + P W Sbjct: 133 EVHPGVHVDVRLGTSDAVQKGITDGSANLALFNDVGASAIQAHDLFSEPLKWLVLDGGQA 192 Query: 182 QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVE 241 + +P+PL + D +RD L L +R+AY + T AA++A L V A P+ Sbjct: 193 VQQDPLPLAVADVGCAWRDAALNALQTVGRAYRIAYSSDTSMGQVAALRADLAVAALPLS 252 Query: 242 MMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNP 290 + DL LP LP T + D S ELA+ + + + P Sbjct: 253 LADRDLIEAPSHYDLPQLPLTHIRVADDGS---ELARAFVELVAADMRP 298 >UniRef50_UPI0001907537 probable transcriptional regulator protein, LysR family n=1 Tax=Rhizobium etli GR56 RepID=UPI0001907537 Length = 330 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 62/148 (41%), Positives = 96/148 (64%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDLD L+TF+A+ D +F AA V +TQSAVS QM+RLE+ +GK+LF + GR LT Sbjct: 5 LDLDQLQTFIAIVDSGSFTKAADKVYKTQSAVSMQMRRLEERIGKQLFIKDGRGNRLTVE 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LL YAR+I+R N+EA ++ + L+G+L IG D+ AD +P ++ R + +P + L Sbjct: 65 GEKLLNYARRIIRLNNEAIAAFDDNRLEGMLRIGTPDDYADRYMPEIIGRFAKTHPNVEL 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRP 158 + + + +AE + E+D+ + TH P Sbjct: 125 YIVCEPSMDLAERMHKGELDIALVTHNP 152 >UniRef50_A0NXC5 Transcriptional regulator, LysR family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NXC5_9RHOB Length = 302 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 77/256 (30%), Positives = 127/256 (49%), Gaps = 2/256 (0%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 I +++LL FVAVA+ A + + RTQ VS Q++RLE+ VGK L R R L Sbjct: 3 IGRFNIELLEAFVAVAEAGNVTHAGSRLNRTQPCVSTQLRRLEERVGKPLIERSARTMNL 62 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G L +A +ILR ++EA L L G + +G + A L + ++P Sbjct: 63 TPAGRILYQHATEILRSHEEARLRLSAPELTGTVHVGLPEWYATGQLQSIFCNFVRIHPN 122 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + L++ V +A + EML + E++L + + K + + P HW L +P+ Sbjct: 123 VKLEMTVADSATLHEMLSNNEINLAIALVSQTKQKPVEIFEEPLHWAVGDNCPLT--DPL 180 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL++ +P PFR++ +L +A W +++ A + AV +G G+ P + Sbjct: 181 PLIMFPEPCPFREISFGSLARAGRQWYERITTTSVAAAQVAVLSGAGLCCLPSGAILEGF 240 Query: 248 RVLSGVDGLPPLPDTE 263 ++L DG P LP T+ Sbjct: 241 KILKEQDGFPKLPATQ 256 >UniRef50_C6BUP0 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BUP0_DESAD Length = 296 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 82/267 (30%), Positives = 135/267 (50%), Gaps = 3/267 (1%) Query: 14 DLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQ 73 DLLR+FV AD +F A V +TQ+AVS Q+++LE+ + LF R GR LT G Sbjct: 21 DLLRSFVVAADTGSFTRTAGLVHKTQAAVSMQIKKLEEDLQCLLFKRDGRGVTLTVEGEI 80 Query: 74 LLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVR 133 L Y+ KIL+ +DEA +++ L G + +GA D+ A LP +L + +P++ +DV Sbjct: 81 LYRYSSKILKLHDEALTAVSAPTLHGKIRLGAPDDYAMKHLPGILREFAVNHPQVQIDVF 140 Query: 134 VKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLVLLD 193 +++ML++ ++DL++ T + + L + W + E +PL L Sbjct: 141 CDDTPTLSKMLKNGQLDLVIATDKVKTKYSAPLELT---WILPQRMDPSEVEELPLALFH 197 Query: 194 DPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGV 253 +R+ L LNK +R+AY + +L + AAV+ GL + + + R Sbjct: 198 PVCCYRENGLKALNKIGRKYRIAYGSPSLAGLLAAVQGGLAIAVVTKDTTANGCRHAIPS 257 Query: 254 DGLPPLPDTEYLLCYDPSSNNELAQVI 280 DGLPP+ L + P +E+ V Sbjct: 258 DGLPPIESIYIDLRFQPGIRSEVISVF 284 >UniRef50_B2IKY9 Transcriptional regulator, LysR family n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IKY9_BEII9 Length = 291 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 88/287 (30%), Positives = 138/287 (48%), Gaps = 3/287 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD DLLR +V+V + + AA R QSA+S QM+RLE L+GK L R GR + T Sbjct: 6 LDPDLLRAYVSVCRHGSLSRAAEQAGRAQSALSMQMRRLEDLLGKRLLRRTGRGVIPTTE 65 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LGYA +IL +E + L + + IG ++E A +LP L ++ +P L L Sbjct: 66 GELFLGYATRILSLGEEVVARLGEQSTSDPIRIGLAEEIAIIVLPEALGQLRRAWPDLHL 125 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 D+ V + +++ E+DL V T A A+ W + P+ ++ Sbjct: 126 DIVVDHSIAISDRWREGELDLAVATCLAFAGDAVRSWDVELLWIGGIDCEPDPAHPLDII 185 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD-LRV 249 + +P +R +L L + RL + ++ A+RA V++GLGV E + P+ +RV Sbjct: 186 VYAEPCIWRRRMLEALTEIGRDHRLTLTSQSISAIRAGVESGLGVALMTAECVRPEKMRV 245 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM-ESYHNPWQYSP 295 L G+PP +Y L Y P N + + + + S W P Sbjct: 246 LPTSAGVPPPLIVQYGL-YAPDRPNVVTKAAIELLARSLQARWSNFP 291 >UniRef50_Q0G3C9 Transcriptional regulator, LysR family protein n=2 Tax=Aurantimonadaceae RepID=Q0G3C9_9RHIZ Length = 323 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 77/253 (30%), Positives = 136/253 (53%), Gaps = 1/253 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +DL+ LRTFVA+ D +F AA V +TQSAVS Q++RLE+ +G LF R+GR +T+ Sbjct: 5 VDLEQLRTFVAIVDAGSFTKAAEDVFKTQSAVSMQIRRLEERLGTRLFERNGRAIEVTDS 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LL YAR++L + E S+ + +QG + IG D+ A+ LP +L R S P + L Sbjct: 65 GQRLLSYARRMLTLSQETLSAFDENAMQGAVRIGLPDDYAERFLPEILARFSRSNPLVEL 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNL-RTSPTHWYCAAEYILQKGEPIPL 189 + + ++ +A+ + +D+ + + + L++ R P H+ ++ + + +PL Sbjct: 125 SIACEPSSNLADAIAKGRLDVALVSDCGTDGAKLDIVRHEPLHFVASSAHEAHLKDIVPL 184 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 + +R + L +A + + + + + + +AV AGL + P + P +R+ Sbjct: 185 AVGRADCKWRREGIEALERAGRRYNVLFSSWSAQVLISAVLAGLAIGVLPECALRPGMRI 244 Query: 250 LSGVDGLPPLPDT 262 L DG P L T Sbjct: 245 LGERDGFPKLNHT 257 >UniRef50_A6UCU7 Transcriptional regulator, LysR family n=12 Tax=Rhizobiales RepID=A6UCU7_SINMW Length = 326 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 79/248 (31%), Positives = 129/248 (52%), Gaps = 2/248 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD DLLRTF+AVAD AA V RTQSAVS Q+++LE+L+G LF RH R +LT+ Sbjct: 16 LDSDLLRTFLAVADTGNVTRAADIVRRTQSAVSMQIRKLEELIGSALFERHSRGVILTDE 75 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +L+ AR+I+ D+ +++ L G + IG S+E ++ LP L ++++P + + Sbjct: 76 GRRLVDNARRIVTLLDDTAAAMRSPALDGSVRIGISEEYINSTLPKALGAFAAIHPGVEV 135 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 VR + L + E+D+ V ++ L +PT W ++ + +P+P+ Sbjct: 136 TVRQDTSMSNTAALAAGEIDIAVVFEPGGRTRSEVLMVNPTVWVTCDQHGAHQRQPLPIA 195 Query: 191 LLD--DPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 + D+ L +L + R+AYV+ T + AAV +GL + + R Sbjct: 196 TYTYAEGGWCDDLALRSLKARGLECRIAYVSRTSGGLIAAVLSGLAIAPLSRSSIPAGCR 255 Query: 249 VLSGVDGL 256 L+ DG Sbjct: 256 ELTEEDGF 263 >UniRef50_B9Z2V3 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z2V3_9NEIS Length = 295 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 90/265 (33%), Positives = 137/265 (51%), Gaps = 22/265 (8%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 ++LD LLR FV+V + AA+ + RTQ AVSQQ+++LEQ +G+ L R R LT Sbjct: 3 MDLDTALLRAFVSVVRSGSINRAASRLQRTQPAVSQQIRKLEQQLGQPLLERSPRGISLT 62 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLT------IGASDESADTILPFLLNRVS 122 G LL YA ++L D+ + L + T IG ++ T LP +L + Sbjct: 63 GAGESLLPYAERLLMLTDQ-----LLPGLGSLPTSAQHRRIGIMEDFVGTRLPRVLADFA 117 Query: 123 SVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQ 182 SV+P L L V V + + + E+D+MV++ + L + C + Sbjct: 118 SVHPGLRLSVTVGLKVELFAAMNAGELDVMVSSPLGDSGPLLKPE---AQFLCPLAWFAA 174 Query: 183 KGEP-----IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA 237 +G+P +PLV+ P +R+ LATLN+A PW + + + +LPA++AAV+AGLGV A Sbjct: 175 RGKPLATTSLPLVIFSAPCSWREQTLATLNRAGQPWHIVFESFSLPAIQAAVEAGLGVAA 234 Query: 238 RPVEMMSPDLRVLSGVDG-LPPLPD 261 + +P DG LPPLP Sbjct: 235 MLAD--TPPANSYCINDGSLPPLPG 257 >UniRef50_C7HXZ5 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7HXZ5_THIIN Length = 312 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 82/272 (30%), Positives = 144/272 (52%), Gaps = 20/272 (7%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 D+ LL+ +AVAD + AAA +CR+QSAVS+Q+++LE+ G LF R + LT Sbjct: 7 FDITLLQALIAVADAGSLTAAAPRLCRSQSAVSEQIRKLEEHCGALLFHRGKKGISLTPA 66 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LLG+AR+++ ++ + L G L + +D T++ LL +V YP L L Sbjct: 67 GQRLLGHARQLVAQHECVYQEMRGMQLAGDLRLAITDYFRPTVIAQLLRQVRMRYPHLRL 126 Query: 131 DVRVKRNAYMAEMLESQEVDL---------MVTTH-----RPSAFKALNLRTSPTHWYCA 176 V ++++ E++ES + D ++ +H + S K L++ P W Sbjct: 127 HVSIRKS----EIIESGQADTDFDIGLSMRILDSHAARRSQTSKAKRLHVLREPLAWIAE 182 Query: 177 AEYILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 ++ + G+P+PLV+L D + ++ TL+ +P+ +A+ AS + ++ A+ AGLG++ Sbjct: 183 PSWVHEGGKPLPLVVLPDTCALQQFIVRTLHANRMPYFIAHSASGVLGLQLALAAGLGIS 242 Query: 237 ARPVEMMSPDLRVL--SGVDGLPPLPDTEYLL 266 + +R + S LP LPD E+ L Sbjct: 243 CLNASAIPAGMRRMDPSADCPLPDLPDVEFSL 274 >UniRef50_Q2BIB7 Probable transcription regulator protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIB7_9GAMM Length = 289 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 74/251 (29%), Positives = 128/251 (50%), Gaps = 1/251 (0%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +L D L++FVA D + + A VCR+Q A+S Q+Q+LE +G + R R LT Sbjct: 5 DLQFDWLKSFVATVDAGSISGATRVVCRSQGAISLQIQKLESAIGAPVLIRDSRRISLTP 64 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LL YAR+IL+ + EA + ++G++ IGA ++ A L ++ + YP + Sbjct: 65 IGNDLLIYARQILKLHSEALEITRGTEVRGIIRIGAPEDYAQAYLSPVIRAFAQRYPNVE 124 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 + + + +A + + +ES +DL +TT + L HW + Y +P+P+ Sbjct: 125 IMLTCEPSAALIDQVESGVLDLAITTVH-GLDRGTFLFNEEVHWVASESYGTWNKDPLPI 183 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 D+ S R +VL L++ + + + Y + + A +G+GV ++P+L V Sbjct: 184 AAHDEGSHIRKVVLEKLDQCNKRYNIVYQSPSTAGQIIAATSGIGVAVLTQCSLAPELIV 243 Query: 250 LSGVDGLPPLP 260 L +GLP LP Sbjct: 244 LGEDEGLPSLP 254 >UniRef50_UPI0001AEBA54 LysR family transcriptional regulator n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEBA54 Length = 285 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/252 (28%), Positives = 131/252 (51%), Gaps = 3/252 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 NL +D LR+FV +A ++ A + RTQ A+S Q+++LE+++G++LF+R LT Sbjct: 3 NLSIDFLRSFVLIAQTGSYTQCAEQLQRTQPAISLQIKKLEEMIGEKLFSRDKNRLALTG 62 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL Y KI+ ND+A + + G + +G E + T++P ++ R + YP+++ Sbjct: 63 AGSRLLSYGEKIVALNDQAMAEFGKPQVTGNIRLGIPSEFSTTLMPKIIRRFTQTYPEIS 122 Query: 130 LDVRVKRNA-YMAEMLESQEVDLMVTTHR-PSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 L+V + ++E L+SQ DL+++ P + + + W + ++ + Sbjct: 123 LEVHCALSKDLISEPLKSQ-FDLILSLQETPDPQQDGYIISDQLVWVGSQRFVNSVPAKL 181 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 P++ P +R L+ PW++ Y + L ++ A+ GLG+T + P L Sbjct: 182 PIIAAPSPCIYRKRATNLLSAIKKPWQVVYTIADLNGIQTAINEGLGITVLAKSSVPPGL 241 Query: 248 RVLSGVDGLPPL 259 VLS + LP L Sbjct: 242 HVLSNSESLPEL 253 >UniRef50_A6VSC2 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VSC2_MARMS Length = 302 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 75/255 (29%), Positives = 130/255 (50%), Gaps = 1/255 (0%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 I LD +LL+T VA+ D +F AA RT SA+S QM+RLE+ VG +LF + GR+++LT Sbjct: 16 IVLDTELLKTLVAIVDHGSFQRAAMQTFRTPSAISMQMKRLEEQVGTDLFCKQGRDQVLT 75 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 E G QL+ YAR+IL+ + A S+ +L +G ++ +L +++ + S+ P + Sbjct: 76 EDGQQLVHYARQILQLQESALQSIKGPQQGVLLNLGCPNDYVANLLVVIMSVMESMLPNI 135 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 +R ++ + E+++ EVDL + T P + + L L W + P+ Sbjct: 136 RFRIRTGTSSELRELMDKGEVDLALVTRTPDSDEGLTLFQDKGVWVAKKGFDWTTLNPLS 195 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L L + F + L K ++L V + L + + + A ++A ++ L Sbjct: 196 LALYESSCKFHSSAVDGLQKKGTDYQLYCVTANLTLIESLLMAEKAISAIASISVNDSLE 255 Query: 249 VLSGVDGLPPLPDTE 263 +++ D LP LP E Sbjct: 256 IIAS-DLLPSLPAVE 269 >UniRef50_A9WT18 Transcriptional regulator, LysR family n=8 Tax=Actinobacteria (class) RepID=A9WT18_RENSM Length = 290 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 79/281 (28%), Positives = 138/281 (49%), Gaps = 1/281 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 D D LR+F+AVA+ F AA + +Q +SQ +++LE G++L R R LT++ Sbjct: 7 FDNDQLRSFLAVAETLNFTRAAERLGLSQPTISQHIRKLEDAAGRQLVLRDTREVRLTDN 66 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G + +AR IL D+A + ++G L G +D+ A T LP +L +YP++ L Sbjct: 67 GDAMAWFARNILAAQDDAARYFSGAAMRGRLRFGTADDLAYTRLPTILRDFRQLYPQINL 126 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 D+ V ++ + +++ ++DL+ A + +R W L G P+PL+ Sbjct: 127 DLTVSQSDQLYRRVKAGQLDLVFVKLVSGAQEGTVVRPDHFSWVGLEGTQLIPGAPVPLI 186 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 PS R + + L WR+ + V AAV+A +G+T P ++ DL + Sbjct: 187 TYPTPSLSRSLAIDALESTGRTWRITCNTKEINGVIAAVRARIGITVMPSTLIPDDLVSI 246 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQA-MESYHNP 290 + LPP+ + ++ L +P + ++ + QA M NP Sbjct: 247 TRRFDLPPVGEVDFTLVRNPLARTDVVDALEQAIMGRKLNP 287 >UniRef50_A6UJN8 Transcriptional regulator, LysR family n=5 Tax=Alphaproteobacteria RepID=A6UJN8_SINMW Length = 285 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 84/263 (31%), Positives = 133/263 (50%), Gaps = 7/263 (2%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDL LL TFV A + +A A V RTQSAV+ QMQRLE+++G L R G LT Sbjct: 5 LDLRLLITFVHAAHSGSLSATAVQVGRTQSAVTMQMQRLEEMLGHSLLHRSGSGVRLTGS 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G + L YA +IL+ +DEA S+ L G + G+ ++ + P LL S YP + + Sbjct: 65 GERFLVYAERILKMHDEAVSAFSDKGLHGSMVFGSPEDYLISFFPMLLRSFGSKYPDVEI 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNL-RTSPTHWYCAAEYILQK--GEPI 187 V + +L+S++VDL + + P+ N+ RT P W + + G+ + Sbjct: 125 KVVSAPTVELRTLLQSRKVDLALVS-TPNLNDVENIVRTEPLVWVGSKPTLELHDFGDAV 183 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL L + L + A + +++AY +++L + ++GL ++ E + PDL Sbjct: 184 PLALPASNAMDHRAALQAMGGAGLRYKIAYASNSLAGLIGLARSGLAISVMTQEAVPPDL 243 Query: 248 RVLSGVDGLPPLPDTEYLL-CYD 269 VL+ LP LP ++ C D Sbjct: 244 HVLNAP--LPQLPHLGIMIACAD 264 >UniRef50_Q1LFN3 Transcriptional regulator, LysR family n=15 Tax=Burkholderiales RepID=Q1LFN3_RALME Length = 298 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 77/250 (30%), Positives = 124/250 (49%) Query: 16 LRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQLL 75 ++TF VA +F A + +QS+VS ++RLE V + LF R + LT G LL Sbjct: 20 IQTFATVATARSFTDAGRQLGLSQSSVSDHIRRLEGSVSRRLFVRDTHSLALTPDGEALL 79 Query: 76 GYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVRVK 135 +AR IL A S LQG + +G S++ A LP +L + +P + L++ + Sbjct: 80 VHARLILESLARAESQFSGPRLQGRVRLGTSEDLAQGPLPNVLAAFRATHPDVELEITIG 139 Query: 136 RNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLVLLDDP 195 + + E +E+ +DL+V R + + L W ++ +P+PL+L+++P Sbjct: 140 MTSKLYEWMEAGTLDLIVGKRREGERRGVPLFRGRLEWLARPGTVVDVRQPLPLILVNEP 199 Query: 196 SPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGVDG 255 S R +VL TL K WR+ +S+ AA + GLG+T R + L D Sbjct: 200 SVTRSVVLDTLAKNGWRWRVVCTSSSHSGCIAAARGGLGITVRAENLTGGGLVPPVNFDA 259 Query: 256 LPPLPDTEYL 265 LP LPD E++ Sbjct: 260 LPALPDVEFI 269 >UniRef50_A6VRV6 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VRV6_MARMS Length = 289 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 80/266 (30%), Positives = 130/266 (48%), Gaps = 6/266 (2%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +L ++LLRTF+ VA+ AA + + S VS Q+ RLE L+ L R LT Sbjct: 3 DLPINLLRTFMVVAETLNLTEAAKQLHKAPSTVSMQLNRLEGLITNPLMERGQHGVRLTA 62 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESAD-TILPFLLNRVSSVYPKL 128 G+QL +A+++L +D+ S + GV+ +G D+ A T+ P L + + S YP+ Sbjct: 63 AGVQLRAHAQQLLNLHDQIVGSFQNIEISGVVRLGTHDQYASRTLAPILQDFILS-YPEA 121 Query: 129 ALDVRVK-RNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 L+ R Y+ ++LE ++D+ + + LR W + ++ + + Sbjct: 122 ELEAFCDYRPDYLVDLLEKGKLDIALVEMLADTEGGIRLRRDELVWVGSKDHFVHTQAVL 181 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PLV+ + R L KA IP+R+A+ + + V AAV+AG+GV P + DL Sbjct: 182 PLVVFAEGCKHRQFACEALTKAKIPYRIAFTSQSRSGVIAAVRAGIGVAIIPYHTLEEDL 241 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSN 273 + D LP LPD E L +N Sbjct: 242 VIY---DNLPNLPDMEVTLFTSEKAN 264 >UniRef50_Q2C715 Transcriptional regulator n=2 Tax=Photobacterium RepID=Q2C715_9GAMM Length = 287 Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 75/274 (27%), Positives = 142/274 (51%), Gaps = 9/274 (3%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D++ LR+F+A + +F AA R+QSA+S QM++LE + +LF + GR +LTE Sbjct: 1 MDIEALRSFLAFVETGSFTRAAKQSFRSQSAISMQMKKLEDELNTQLFTKDGRMLVLTED 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +L +A +I+ +D+A L Q + +G D+ A++ILP+++ + +P ++L Sbjct: 61 GQRLATHATQIIATHDDALLELKNKLPQQTIHLGCPDDYAESILPYIVALLREEHPHISL 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 + + ++ +L+S +DL + T P++ + L+T W + + + +P+P+V Sbjct: 121 QITCAPSVHLKGLLDSNRLDLAIVTRSPTSQEGYFLQTDKGIWVGSPHHDIVNQQPLPIV 180 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARP--------VEM 242 L F + L K + ++L + A + V+ GL ++A +E+ Sbjct: 181 LFQRDCKFHSAAIEGLIKRNRHYQLVSCCISATANKGLVRQGLAISAMAKCSMPNDLIEL 240 Query: 243 MSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNEL 276 ++P L L VD + LP +LL P S N + Sbjct: 241 IAPHLPSLPVVDIVLSLPSKPHLL-LSPESINRM 273 >UniRef50_Q7W0V6 Putative lysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7W0V6_BORPA Length = 293 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 91/257 (35%), Positives = 126/257 (49%), Gaps = 19/257 (7%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD LLR+FV V D F A+ + TQS VSQ + RLE+ +G L R R+ L TE Sbjct: 6 LDPVLLRSFVTVVDTGNFTRASEHLHLTQSTVSQHVIRLEENLGCRLLDRGQRHVLPTEE 65 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LLGYAR ILR DEA S+ + VL +GA ++ L +L + + YP L L Sbjct: 66 GERLLGYARSILRLADEARESVAAAQGNAVLRLGAPEDFMGAALMPVLAPLLARYPLLRL 125 Query: 131 D---------VRVKRNAYMAEMLESQ-EVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYI 180 + +R R+ + +L Q EVD H P + R PT Sbjct: 126 EFDSGLSHQLLRRYRDGELDLLLVKQWEVDADCQAHWPEPLCWVAARDGPT--------- 176 Query: 181 LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 L GE +PL + + +R + TL + PW + Y +++L + AAV AGLGV+ P Sbjct: 177 LPAGEAVPLAVFPAGALYRQEMTRTLEASGRPWHIRYASTSLAGLVAAVGAGLGVSLLPA 236 Query: 241 EMMSPDLRVLSGVDGLP 257 +LRVL DG P Sbjct: 237 ASAGGELRVLRKRDGFP 253 >UniRef50_Q7WAP6 Putative lysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7WAP6_BORPA Length = 294 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 91/281 (32%), Positives = 133/281 (47%), Gaps = 5/281 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 N+D LLR F+AV D + AAAA + TQ AVSQQ+QRLE L G+ L R LT Sbjct: 4 NIDTALLRAFLAVHDTGSLTAAAALLHLTQGAVSQQLQRLEALFGRTLLERRRSGAALTG 63 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LLG AR+++R NDE + ++ G + +G + T LP LL S YP + Sbjct: 64 DGARLLGRAREMVRINDELMQHMTGADCVGAVRLGVPHDLIGTHLPGLLRAYSLRYPDVD 123 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHR-PSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 + + + + E + +++DL + +A L W A + P+P Sbjct: 124 ISLISATSPELLEQVRRRKLDLTLAEEPIGAAAGGERLAVDRVVWLAAPGGQAWRKNPLP 183 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 + L+ D FR ++ L+ IPWR + A V+ L VTA + + DL+ Sbjct: 184 VSLVSDACAFRPVLADALDGGRIPWRSVFENGNADATLTTVRLDLAVTASLLSVAPADLQ 243 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNN----ELAQVIYQAME 285 VL GLP LPD L P + E+A I QA + Sbjct: 244 VLDAASGLPALPDYAINLYIAPGERSQAVEEMAHHIRQAYQ 284 >UniRef50_A8KXK4 Transcriptional regulator, LysR family n=4 Tax=Actinomycetales RepID=A8KXK4_FRASN Length = 293 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 82/234 (35%), Positives = 125/234 (53%), Gaps = 13/234 (5%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 LDL LR+ VA+AD F AA A+C +QSAVSQ ++RLE++VG+ L GR T Sbjct: 7 TLDLTALRSLVAIADCGGFRRAAEALCISQSAVSQHVRRLEKVVGRPLVELVGRGSRFTP 66 Query: 70 HGIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 G LL R+IL +D+A L S LQ ++T+G+++ +AD ++P ++ ++ +P Sbjct: 67 DGELLLSAGRRILATHDDALELLGVGASVLQRLITVGSTEHAADHLIPRVMAVLTEQFPD 126 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMV---TTHRPSAFKALNLRTSPTHWYCAAEYILQKG 184 + + R+ R A +A L+ +D+ V T P+ A L P WY A +++ Sbjct: 127 VEVRFRLDRGARLAHALDRGTLDVAVLVGTGGSPAGRPAGLL---PLAWYSAPGWLVPPP 183 Query: 185 E-PIPLVLLDDPSPFRDMVLATLNK----ADIPWRLAYVASTLPAVRAAVKAGL 233 + P+PLV +DDP R L TL + A + Y+A L A RA V L Sbjct: 184 DRPLPLVAVDDPCTIRTQALTTLARAGRVASVVGESGYLAGVLHAARAGVGVAL 237 >UniRef50_Q13GF3 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13GF3_BURXL Length = 289 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 80/282 (28%), Positives = 146/282 (51%), Gaps = 3/282 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 L L+LL+ F++VA+ ++F A + + RTQSA+S +++RLE+++G +F R G++ LT+ Sbjct: 2 LHLNLLQVFISVAENSSFTLAGSEMHRTQSAISMKIKRLEEILGVPVFERSGKSIELTKE 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L ++R+IL+ DEA S++ V+ +G ++ A +P +L +P + + Sbjct: 62 GAIFLTHSRRILQLVDEAMSAVGAVRKSNVVRLGCVEDYAVRTIPKILVDFWVEHPDVHI 121 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 ++ +A + + L + D+++ H ++ + + T W +A + EPIP+ Sbjct: 122 EMGTGDSASLLDRL-GDDFDVVLAEHPLNSGEGEVVCTDSLVWGASANHSPHLQEPIPVA 180 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 + R + LN A PWRLA +++ + ++ AV AGL V ++ L L Sbjct: 181 FRSQGALERQWACSALNAAGRPWRLACLSAGIGTLQTAVDAGLAVGVFKASTLAGALNRL 240 Query: 251 SGVDGLPPLPDTEYLL--CYDPSSNNELAQVIYQAMESYHNP 290 + D P LPD E L D S + Q++ + ES P Sbjct: 241 TPADNFPQLPDVEMALHVMNDGFSQPSIMQLVKKLRESLQRP 282 >UniRef50_B5WKB1 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=B5WKB1_9BURK Length = 306 Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 81/252 (32%), Positives = 126/252 (50%), Gaps = 2/252 (0%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 NLDLDL+RTFVAVAD + AA + TQ AVSQQ++RLE ++ LF R R L+ Sbjct: 14 NLDLDLVRTFVAVADSGSMTVAANLLHMTQGAVSQQVKRLEDVLDCLLFVRKTRRLELSR 73 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G L AR++LR NDE + + L+G L +G + + P + + P + Sbjct: 74 QGELFLVKARQLLRLNDEIWADMNVQPLRGALRVGVPYDLVTRLAP-AMKTFAEANPHVD 132 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 + + + +++ + S +D+ + + S + + P W + P+PL Sbjct: 133 ISLVCGTSPELSDAVNSGRLDVSLVEYVASEAQGEVVCIEPLVWVKGRGSDAWQKRPLPL 192 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 ++D+ FR +VL L I WR + + + A A V+AGL +TA V + DL Sbjct: 193 SMVDERCAFRPVVLGVLADEGIAWRTVFESGNIEATAATVRAGLAITAWLVSTVPADLET 252 Query: 250 LS-GVDGLPPLP 260 L+ V GLP LP Sbjct: 253 LTPRVAGLPALP 264 >UniRef50_B2Q7A1 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q7A1_PROST Length = 289 Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 73/263 (27%), Positives = 127/263 (48%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 L+ LL+TF+ VA+ F A+ + TQS +SQQ+QRLE LVG+ LF R R LTE Sbjct: 11 LNFILLKTFITVAETGNFTVASQHLNSTQSTLSQQIQRLEALVGQPLFIRGHRMLTLTET 70 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L YA+KI+ ND + + + L +G ++ A + L +P + L Sbjct: 71 GEVLFSYAKKIIALNDMFFMKITGNAVIQTLRLGFPEDFASGQVTPTLAAFMHEHPNIRL 130 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 +V + + + + +DL++ R FK+ P W + + +PL+ Sbjct: 131 EVTSGLSRQLYQHYQQGALDLIIVKQRKGEFKSDYRWPEPLCWLTSTNNEYLNADSLPLI 190 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 + + +R+ + L+ PW + Y S+L +++A+ GLG++ P+ P R+L Sbjct: 191 VFPENGLYRNDMFRLLDIEQRPWHITYTCSSLAGIQSAIADGLGISLLPLRAKLPQHRIL 250 Query: 251 SGVDGLPPLPDTEYLLCYDPSSN 273 + +G P + E + SS+ Sbjct: 251 TEQEGFPAAEEMEIAMHVHDSSD 273 >UniRef50_A4WYH8 Transcriptional regulator n=11 Tax=Alphaproteobacteria RepID=A4WYH8_RHOS5 Length = 288 Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 82/266 (30%), Positives = 131/266 (49%), Gaps = 1/266 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDL LR+F+AV D +F+ AA + QS VSQ ++RLE +G+ LF R T Sbjct: 2 LDLGQLRSFLAVHDTASFSLAATRLGLAQSTVSQHVRRLEDHLGRRLFDRDTHRVAPTAA 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LL AR +L +D + + S L+G L G S++ + LP +L S+ P + L Sbjct: 62 GEMLLAEARALLEISDRLEAQFLQSRLRGRLRFGLSEDMVNGPLPSILRGFSAANPSVDL 121 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 ++ V +A + E +DL++ R + + P W ++ + P+PL+ Sbjct: 122 ELTVALSAALFAEQEMGRIDLVLAKRRLGDDRGHVVAREPLVWLARDPDLVARWRPLPLI 181 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 PS R L L +A +PW ++ S+L + AA +AG+GV +P + LR + Sbjct: 182 SFPAPSITRAAALDALEQAQLPWLISCTCSSLSGLTAAARAGMGVFVQPRGLTPEGLREV 241 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNEL 276 D LPPL E++L ++ L Sbjct: 242 PA-DMLPPLETVEFVLVERRGADRAL 266 >UniRef50_Q13GY4 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13GY4_BURXL Length = 294 Score = 119 bits (299), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 82/265 (30%), Positives = 131/265 (49%), Gaps = 11/265 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 DL+LL T VAD + +AAA + R+QSAVS+Q+++LE+ G LF R + LT Sbjct: 5 FDLELLNTLSVVADAGSLSAAAVQLHRSQSAVSEQIRKLEESCGLALFLRGKKGASLTPA 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LL +ARK+L ND A + +L G L + +D T + +L ++ YP L L Sbjct: 65 GARLLDHARKLLLLNDVAYRDMQGLSLAGDLRLAITDYFRPTDIAKVLKQLGDQYPSLRL 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTH-----------RPSAFKALNLRTSPTHWYCAAEY 179 V V ++A + S D+ V+ + ++ +R P W A + Sbjct: 125 HVSVYKSALIRRDAGSGNFDIGVSMRVADPAGNESPVEKNGLASIMIRREPLQWVAAPSF 184 Query: 180 ILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARP 239 P+PLV L D + +LA LN+A + +A+ AS + +++A+ AGLG + Sbjct: 185 ERVPHGPLPLVALPDTCSLQRYMLARLNEAGADYFIAHSASGVAGLQSALSAGLGFSCLN 244 Query: 240 VEMMSPDLRVLSGVDGLPPLPDTEY 264 + D+ L + LP LP E+ Sbjct: 245 ASAIPDDVVPLRSIKTLPKLPHVEF 269 >UniRef50_A8L701 Transcriptional regulator, LysR family n=3 Tax=Actinomycetales RepID=A8L701_FRASN Length = 312 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 78/227 (34%), Positives = 111/227 (48%), Gaps = 1/227 (0%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 LD+ LR+FVAVAD F AA A+ +Q+AVSQ ++RLE G+ L R GR LT Sbjct: 16 TLDIAPLRSFVAVADCGGFQRAATALHLSQAAVSQHVRRLESATGRVLVERQGRGSQLTR 75 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G QLLG AR+IL +DE ++ + IG+++ A +LP L + P Sbjct: 76 DGEQLLGQARRILSLHDETLHGFGLEEIEETVLIGSTEHGAAQLLPVLATVLGQSLPHHR 135 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYIL-QKGEPIP 188 + R+ R + E LE+ +DL + +A + WY A + +PI Sbjct: 136 VRFRIDRGTTLREGLEAGRMDLALLLGPADDPRAQPVGELELTWYSAPAWRRPSAAQPIS 195 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGV 235 +V D P R L TL+ I + A L V+AAV AGLG+ Sbjct: 196 VVAFDQPCALRSRALETLSLHAIETVIGAEAMQLAGVQAAVGAGLGI 242 >UniRef50_Q393B8 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=Q393B8_BURS3 Length = 296 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 82/266 (30%), Positives = 130/266 (48%), Gaps = 3/266 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDLDLL FVAVA+ +F AAA V R+QSAVSQ++ RLE +G +F R R+ LT+ Sbjct: 2 LDLDLLHAFVAVAETGSFTAAADVVGRSQSAVSQKVLRLEDALGVRVFERTSRSLRLTQE 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G ++L R++L D L L +G S+ LP +L R +P + L Sbjct: 62 GERVLAGGRRLLAQYDAFMHELREPPQVERLRLGVSENLVHAQLPRILARFGERFPAVQL 121 Query: 131 DVRVKRNAYMAEMLESQEVDLMVT--THRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 ++ + + + + +D+ H + + + P W A Y G P Sbjct: 122 ELVTGSSPELVDAHRAGLLDVFFARQKHDGAPVRGRVIWREPLVWLAAKNYRNDPGRPAR 181 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 LV++ P +R+++ +L+ A W + AS L V+AAV GLGVTA + ++ Sbjct: 182 LVMMPPPCAYREVMTESLDAARREWSVGCTASNLVGVQAAVAGGLGVTALGKSFLQAGMK 241 Query: 249 VLSGVDGLPPLPDTEY-LLCYDPSSN 273 +L P LP +E ++ DP++ Sbjct: 242 ILPTSAQWPALPASEVAVIGEDPATQ 267 >UniRef50_B8IHA3 Transcriptional regulator, LysR family n=2 Tax=Methylobacterium RepID=B8IHA3_METNO Length = 283 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 77/257 (29%), Positives = 128/257 (49%), Gaps = 1/257 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D LLRT AV +F+ AA + QS VSQ +QRLE +G+ L AR + T Sbjct: 5 IDPILLRTLTAVVRSRSFSRAAEQLSLRQSTVSQHVQRLEAQLGRRLIARDTHSVAPTPE 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LG+AR +L ++ +L +QG L GAS++ T L + YP + Sbjct: 65 GEAVLGFARTVLDAHERLERTLAGGAVQGRLRFGASEDFVQTRFAEALRDFRASYPSVDF 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 ++ V + E +E ++DL + R + L +R W + ++ EP+ ++ Sbjct: 125 ELSVSFTQLLGEAVERGDLDLFLGKRRVGEAQGLLVRRDRLVWVGLPSALPERDEPVSIL 184 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 PS R + L L + WR++ ++L +RAA AGLG+ + +++ L+ L Sbjct: 185 TFPAPSITRAIALEALARESRAWRISCTCASLSGLRAAALAGLGLMVQARSLIADGLQEL 244 Query: 251 SGVDGLPPLPDTEYLLC 267 +G D LP LP+ E++L Sbjct: 245 AGTD-LPRLPEVEFILA 260 >UniRef50_Q167A0 Transcriptional regulator, LysR family, putative n=4 Tax=Rhodobacterales RepID=Q167A0_ROSDO Length = 297 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 80/254 (31%), Positives = 125/254 (49%), Gaps = 3/254 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 INL +LLR F+ V ++ +F AA + RTQ A+S Q++RLE+ VG L R G+ LT Sbjct: 7 INLPTELLRAFITVVEVASFTRAAEILGRTQPAISLQVKRLEESVGCTLIERKGKEISLT 66 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 E G L +AR+ILR ND A + N L +G + A L L V Y + Sbjct: 67 ERGEALAIHARQILRLNDLAMAQFERPNPLAKLRVGLPVDYAVNTLQSCLTDVVKQYSDI 126 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRP--SAFKALNLRTSPTHWYCAAEYILQKGEP 186 +++R + ++ + S ++D+ V F N + PT W A ++ + Sbjct: 127 QIEIRCDLSKHLLSAMRSNDIDIAVALFDGDDQQFLFRNWKEQPT-WVGATDFEICDQAD 185 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 IPLV+ +RD + L A WR+AY + + ++ AV+ GLG++ + Sbjct: 186 IPLVVHPYGCVYRDRMATALKLAGKSWRIAYSSPGIGGLQRAVQDGLGLSCLTAPTVQSG 245 Query: 247 LRVLSGVDGLPPLP 260 +R + DGLP LP Sbjct: 246 MRKFTEQDGLPVLP 259 >UniRef50_A3JDH1 Probable transcriptional regulator n=1 Tax=Marinobacter sp. ELB17 RepID=A3JDH1_9ALTE Length = 287 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 86/257 (33%), Positives = 130/257 (50%), Gaps = 2/257 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDL++LRT VA+AD + AAA + TQSAVS Q++RLE + L GR LT Sbjct: 6 LDLNMLRTLVAIADAGSVTAAAERLAYTQSAVSMQLRRLEASLDVALHEPEGRKIRLTAE 65 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +L+GYARK+L N EA + + G L++G ++ A +L +L+ S YP + L Sbjct: 66 GQKLVGYARKMLALNSEAVDDVQRRQVSGELSLGIPEDYA-FLLTSVLSHFSQRYPAIQL 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 V + + + + ++ +D+ V T + + +R P W A +PIPL Sbjct: 125 QVICRSSVDLVKQVQDGGLDMAVVTRQVRSPGGEVIRREPLVWAVGATAQPSLADPIPLA 184 Query: 191 LLD-DPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 L FRD+ A+L A WR+AY + ++ + V AGL V M++ LRV Sbjct: 185 LYSPGADVFRDVAEASLAAAGRSWRMAYSSQSMTGLLPVVVAGLAVVVVTRNMLTDQLRV 244 Query: 250 LSGVDGLPPLPDTEYLL 266 + G+P L E L Sbjct: 245 IDERSGMPALQSVEIAL 261 >UniRef50_Q7MCP0 Transcriptional regulator n=17 Tax=Vibrionales RepID=Q7MCP0_VIBVY Length = 304 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 73/277 (26%), Positives = 139/277 (50%), Gaps = 3/277 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +N+D++ LR+F+A + +F AA + RTQSA S QM++LE+ +G ELF + GR +L+ Sbjct: 20 LNMDIEALRSFLAFVETGSFTRAAKQISRTQSAFSAQMRKLEEEIGAELFIKEGRYLVLS 79 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 + GI+L +AR+++ +D+ S L + L +G ++ + +LP L+ + P Sbjct: 80 DAGIRLTSHARQLVSQHDQTLSELKHFQDKRPLRLGCPEDYNEKVLPSLIALLHQAQPTC 139 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 ++ V + + + L++ ++D + T P++ + L + W + + ++ +P Sbjct: 140 SIQVFSEPSIELRRKLDAGDLDCAILTRAPNSEEGYWLTSDQGVWIASQTFCVEAHSALP 199 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L L + + L K ++L +T A RA V+ GL + A M +R Sbjct: 200 LALFQADCKYHAAAIDGLTKRGQAFQLLACCNTASAQRALVEQGLAIGAMGKLSMGDKVR 259 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 +L PPLP + +L S+ L+Q + +E Sbjct: 260 LLK---DFPPLPKVDIVLAVSAKSHPLLSQTWLKQLE 293 >UniRef50_A2SCP1 Transcriptional regulator, LysR family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SCP1_METPP Length = 285 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 81/276 (29%), Positives = 136/276 (49%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD+D LRT VA AD + AA V +T SAVS + +L + + L R GR +LT Sbjct: 3 LDIDQLRTLVAFADAGSCKGAAHLVHKTPSAVSVHLAKLAASLERPLLERQGRRLVLTHD 62 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +L+ YAR++L EA + G L +G D+ ++ LL ++ + P+ + Sbjct: 63 GTELVRYARRMLALQSEALAHFRAPEFGGTLRVGLPDDYIPVLMAPLLAALARLAPRAHV 122 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 +V+ +A + +L ++DL + + + + LRT W +A++ + + +PL Sbjct: 123 EVQCAPSAELRPLLADGQLDLAILSAETDTQEGVVLRTERVVWTASAQHDVAHADCLPLA 182 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 L + FR LA L K R+ + ++ AV+AAV+ G V+ + PD VL Sbjct: 183 LFPEGCIFRKWALAQLRKRRREHRIVCTSRSMAAVQAAVRTGFAVSVVAESCVPPDAVVL 242 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 + G P LP +L P+++ LAQ + + M Sbjct: 243 TPQQGFPALPAVTIILAASPATDAALAQRLGEQMRG 278 >UniRef50_C8Q3I4 Transcriptional regulator, LysR family n=1 Tax=Pantoea sp. At-9b RepID=C8Q3I4_9ENTR Length = 286 Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 88/259 (33%), Positives = 135/259 (52%), Gaps = 3/259 (1%) Query: 16 LRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQLL 75 L +FVAV + +F AA V +QS VSQQ++RLE++VGK L R +TE G +LL Sbjct: 12 LLSFVAVCETASFTRAADRVHLSQSTVSQQVRRLEEMVGKALLQRTSHQVAVTEEGEKLL 71 Query: 76 GYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVRVK 135 GYAR+I+ N EA L GV+ +G ++ A L + S +P+L LDV Sbjct: 72 GYARRIIALNGEAHDVLSDKWRDGVMRLGVPEDFAAPTAGLLAD-FSRQHPQLRLDVMSG 130 Query: 136 RNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLVLLDDP 195 + + +E+D+M+ +P + L R P W +AE+ P+PLV+ Sbjct: 131 MYVDLHAAWQREELDIMLIK-QPGGERPLAARPEPLLWLDSAEHPCFGQTPLPLVVFPQL 189 Query: 196 SPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGVDG 255 +R+ + TL+ WR++Y +++L A+ +A AGLG+T P P+ RVL +G Sbjct: 190 GLYREEMCQTLDSLGRSWRISYSSTSLVALASAAAAGLGLTLLPASCRLPEHRVLGDAEG 249 Query: 256 LPPLPDTEY-LLCYDPSSN 273 LP + E L C P + Sbjct: 250 LPVISHFELALFCRQPQDH 268 >UniRef50_A3YHF1 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YHF1_9GAMM Length = 288 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 76/276 (27%), Positives = 137/276 (49%), Gaps = 5/276 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDLDLLRTFVA+ AA V R+Q AVS Q++RLE++ GK+L R ++ LT+ Sbjct: 5 LDLDLLRTFVAIVKTGQLKLAAETVSRSQGAVSMQLKRLEEVTGKQLLIRSNQDLKLTQA 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 GI+LL Y+ ++L N +A +L + LT G + A + + + S P L Sbjct: 65 GIKLLSYSEQLLSLNYQAVKALTVKEEKSHLTFGIPSDYAQDFIRHFMPLLKSELPLLDA 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 V + + + + S+E+D+ + T + A +L P W + L+ E IPL Sbjct: 125 KVICDSSRNLRKRVNSEEIDIAIVTGEGAKTSASSLWIEPLIWAAPHGFDLKADEEIPLA 184 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 + +D+ ++ ++ ++ ++ + L + AA +AGLG+ PV +++ + Sbjct: 185 SFEQDCMIKDIAKQSMKESKRVFKTSFESPVLENLVAAAEAGLGIALLPVSLVNEN---- 240 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 + L L T+ ++ + + LA + Q++ S Sbjct: 241 -RLQSLETLSLTQKVISTEIIHSTNLASELVQSISS 275 >UniRef50_A3YEV8 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YEV8_9GAMM Length = 297 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 72/250 (28%), Positives = 126/250 (50%), Gaps = 1/250 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD DLLRTFVA+A+ AA + RTQSA+S Q+++LE +LF R R LLTE Sbjct: 15 LDSDLLRTFVAIAETGNLTQAANYLNRTQSAISVQIKKLEASFSTQLFYRQPRGMLLTED 74 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LL ARK++ + + L + L G + +G D+ IL L + P + + Sbjct: 75 GHRLLPEARKLIAEVNR-IAGLFTNKLSGRVALGVPDDCGLVILESGLRHFLANNPDVEV 133 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 VR ++ + +++ E+DL + P L + W L + +PL Sbjct: 134 SVRCSLSSQFPQAIQAGELDLALYLASPEEDFDTILWQEESVWVAHESLQLMPDQVVPLA 193 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 + D +R++ + L + + P+++ + + ++ ++ AV AG+ V + + P +++L Sbjct: 194 VYDRDCWWREVAIDALEEVNRPYQMTFSSESIAGIKTAVNAGVAVAMLSINSVEPHMKIL 253 Query: 251 SGVDGLPPLP 260 + DG P LP Sbjct: 254 TKADGFPSLP 263 >UniRef50_Q13JW6 Transcriptional regulator, LysR family n=5 Tax=Proteobacteria RepID=Q13JW6_BURXL Length = 283 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 84/271 (30%), Positives = 129/271 (47%), Gaps = 8/271 (2%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARH--GRNKLLT 68 LDL+LL T + V D +F A V RTQS VSQQ+++LE+LVG+ L R G T Sbjct: 2 LDLELLNTLICVVDEGSFTRAGERVHRTQSTVSQQVRKLEELVGRTLLLRDRTGNQVTAT 61 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 EHG L YAR++L EA +L+ + IG ++ + +L+ P + Sbjct: 62 EHGELLAQYARRLLALAQEAQDALVSDVELTPVRIGVPEDFDARRMSAMLSGFVKAKPGV 121 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYIL---QKGE 185 L+ + + L + E+++ + P + + L W L E Sbjct: 122 RLETVAGMSVDLQRKLAAGEIEIALVKREPGSGECLASWPESLVWVRGGNVELPEESADE 181 Query: 186 PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSP 245 PIPL L +R + +L+KA WR+A+ + +L ++AAV +GLGV+ P + P Sbjct: 182 PIPLALFPHGCVYRQRAIRSLDKALRRWRIAFGSQSLTGIQAAVSSGLGVSVLPTSAVLP 241 Query: 246 DLRVLSGVDGLPPLPDTEYLLCYDPSSNNEL 276 + R+ + GLP LP TE L N L Sbjct: 242 EHRLCA---GLPQLPPTELALVTSGGVLNAL 269 >UniRef50_D1RYM9 Transcriptional regulatory protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RYM9_SEROD Length = 293 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 77/278 (27%), Positives = 140/278 (50%), Gaps = 10/278 (3%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD+ + F+ VA+L++F AA ++C TQ+ V+ ++QRLE+++G+ LF R RN L++ Sbjct: 5 LDIHTVEAFLKVAELSSFTLAAESLCITQAGVTIKIQRLEKILGQPLFHRTPRNVYLSQE 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L AR +L + A S+ +N + IG SD D F+L ++ Y + + Sbjct: 65 GKSFLPKARALLDAHFIAIRSINMANENKEINIGISDHVIDHQFMFILTQLRQRYSDILI 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 V V ++ + + E++++D+ + T LR WY A ++ + + +PL+ Sbjct: 125 KVIVDGSSSILQQFENKKIDIAIITQDGDKKGGEYLRQESYGWYGAIN-MMAEIKKLPLI 183 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 L + R +++ L + W ++ L A+ AA K GLG+ P+ ++SP R L Sbjct: 184 TLKESCRLRKLIIDLLLEHGKDWYDSFQGGGLNAILAATKMGLGIAPLPLGLLSPVDR-L 242 Query: 251 SGVD-----GLPPLPDTEYLL---CYDPSSNNELAQVI 280 +D LP +P ++ C D S L +++ Sbjct: 243 ELIDVTERFNLPKIPSASVVVYDNCLDLCSRELLRELV 280 >UniRef50_A9GYT7 Transcriptional regulator n=4 Tax=Rhodobacteraceae RepID=A9GYT7_9RHOB Length = 299 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 78/277 (28%), Positives = 132/277 (47%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 NLD DLLRTF+AVA + AA + R+QSA S Q++RLE ++G+ +F RHGR +L+E Sbjct: 3 NLDSDLLRTFLAVAQAGSVTDGAARIHRSQSATSIQVKRLEAILGRSVFDRHGRGVVLSE 62 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL A+ + D + + G L +G D+ L +++ + +P + Sbjct: 63 TGRRLLPVAQDVTARLDVTLREISQCAVSGQLHVGIPDDHGRAKLVEIISAFTRHHPGVE 122 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 L V + LE +DL + + L PT W + GE +P+ Sbjct: 123 LVVTCALSTEFPNALEKGALDLAIYEVEHPKPQEEVLFEDPTCWMTSTHRDFPTGESLPV 182 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 L D +RD+ +A+L P+R+AY + ++ V AAV+AG+ V + L Sbjct: 183 ALFDHACWWRDVAIASLEARGKPYRIAYSSQSVSGVIAAVEAGIAVGLLGRSSLHSGLAA 242 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 + G P ++ ++ + +L + +A+ S Sbjct: 243 VDENLGFGSTPASKLVMAARGAKETQLQAAMKEAVRS 279 >UniRef50_B2JVD1 Transcriptional regulator, LysR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JVD1_BURP8 Length = 282 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 80/260 (30%), Positives = 126/260 (48%), Gaps = 7/260 (2%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARH--GRNKLLT 68 LDL+LL+T V V D +F A V RTQS VSQQ++RLE+ VG+ L R G T Sbjct: 2 LDLELLKTLVCVVDEGSFTRAGDRVHRTQSTVSQQVRRLEERVGRTLLMRDRTGNQVTAT 61 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 EHG L YAR+++ + EA +L + + IG ++ + +L+ P Sbjct: 62 EHGELLTHYARRLIALSQEAQDALASDVSRVPIRIGVPEDFCAKRMASILSGFVKARPDA 121 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCA--AEYILQKGEP 186 L+ + + L E+D+ + P + +L W E ++GEP Sbjct: 122 RLETVTGMSGDLQRKLSGGEIDIALVKREPGSGPSLAAWPESLVWVRGRQVEVPSEEGEP 181 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +PL L +R + TL+++ WR+A+ + +L ++AAV +GLG+T P + P+ Sbjct: 182 VPLALFPQGCVYRKRAIRTLDQSKRSWRVAFGSHSLTGIQAAVASGLGITVLPTTAVLPE 241 Query: 247 LRVLSGVDGLPPLPDTEYLL 266 + LP LP TE L Sbjct: 242 HSLCF---DLPRLPPTELAL 258 >UniRef50_Q1ZA42 Putative uncharacterized protein n=2 Tax=Bacteria RepID=Q1ZA42_PHOPR Length = 345 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 70/227 (30%), Positives = 112/227 (49%) Query: 17 RTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQLLG 76 RTFV VA AA A+ R+Q+AVS QM+RLE+LVG L R R LT+ G LLG Sbjct: 64 RTFVMVAKTGELKKAAEAIFRSQAAVSMQMKRLEELVGCTLMERSNRGIQLTDAGETLLG 123 Query: 77 YARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVRVKR 136 Y+ + L+ N+ S+L +L G G + A L + + ++ P L + R Sbjct: 124 YSEQFLKLNNATFSALNERDLSGQFNFGVPTDYAQDFLNYFMPVLTREIPNLEARIVCDR 183 Query: 137 NAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLVLLDDPS 196 + + E LE+ E+D+ + L L + W + L++ + +P+ + DD Sbjct: 184 SRNLREKLEAGELDIAIVAGEADYTDDLLLWSERLIWSASTHINLKELKEVPVAIYDDNC 243 Query: 197 PFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMM 243 D+ ++ L KA+I +R + +S L V AV +G ++ P M Sbjct: 244 IVSDLCISGLKKANISYRQVFSSSILENVATAVHSGFAISLLPESMF 290 >UniRef50_A0B0Y3 Transcriptional regulator, LysR family n=4 Tax=Burkholderia cenocepacia RepID=A0B0Y3_BURCH Length = 291 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 82/252 (32%), Positives = 122/252 (48%), Gaps = 1/252 (0%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 NLDL LLR FV+VAD + AA A+ TQ A+SQQ+ RLE L G LF R RN LLT Sbjct: 7 NLDLALLRAFVSVADHRSMTAAGHALHLTQGAISQQVARLEMLSGP-LFVREHRNLLLTA 65 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL AR++L +D + L ++G + +GA + T L +L + +P++A Sbjct: 66 AGERLLEQARRLLAAHDALLAELTAGAVEGTVRVGAPQDLVGTCLAPILKSYTHAHPRVA 125 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 L + + + L +D+ + + + + W A + P+P+ Sbjct: 126 LTLVCAASPELRRGLTHGNLDVALIEAPVGSSRGECIAVDRLVWVGAKGGTAHRHSPLPV 185 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 ++ FR VL L D PWR + + A A V+A L VT + PDL + Sbjct: 186 SMVAQTCAFRPTVLDALRGCDRPWRTVFENGSFDATAATVRADLAVTVWLASTVPPDLEI 245 Query: 250 LSGVDGLPPLPD 261 L GLP LP+ Sbjct: 246 LPAGGGLPALPN 257 >UniRef50_A0QVE3 Transcriptional regulator, LysR family protein n=4 Tax=Mycobacterium RepID=A0QVE3_MYCS2 Length = 297 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 79/236 (33%), Positives = 125/236 (52%), Gaps = 2/236 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD+ LR+ VAVAD F AAA + TQSAVSQ ++RLE +VG + R GR TE Sbjct: 5 LDIAPLRSLVAVADCGGFHRAAAVLHLTQSAVSQHVRRLEGVVGGPIVQRSGRGMAFTEL 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +++ +AR+IL +D A + L + + L IGA++ AD +LP L + ++ P + Sbjct: 65 GHRVVAHARRILAAHDAALADLGAAE-EKTLLIGATEHGADVMLPGLNDALAECLPDWRV 123 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 R+ RN +A+ +E VD+ V + P W A + GEP+P+V Sbjct: 124 RFRLDRNVALADAIEHGTVDVAVMLDGSGWDRVNASGMVPLKWISARNFGCD-GEPLPVV 182 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 + +P R+ A L K ++ +++ + L + AAV++GLG+ P+ PD Sbjct: 183 VYSEPCTLREPAFAALEKLEVDYQIVAECADLSGLIAAVRSGLGIALLPMIGRLPD 238 >UniRef50_A9CFW9 Transcriptional regulator, LysR family n=5 Tax=Proteobacteria RepID=A9CFW9_AGRT5 Length = 293 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 81/288 (28%), Positives = 134/288 (46%), Gaps = 5/288 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 LD++ + FV +ADL +F AA + TQ A+S +++RLE +G+ L R R+ L+ Sbjct: 6 TLDVEAVEAFVTIADLQSFTRAAETLGTTQGAISVKLKRLEDRLGQRLLERTPRSVRLSA 65 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G L AR+ L +D A + L S+ + +G + A +P LL R++ P L Sbjct: 66 QGAVFLAPAREFLAAHDRALAGL--SSPRRRFGLGIAAHVAGPEVPTLLARLNDHDPGLT 123 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 ++VR+ + + + + E+D + L WY ++ ++GEP+ L Sbjct: 124 IEVRMDHSRSLLDAFDRGEIDAAIIRREDDRRDGEVLGPEHFGWYATPQFEHRQGEPLRL 183 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 L R++ L+ A I W ++ T V AAV AGL ++A + P Sbjct: 184 AALSPACGVRNIATHALDAAAIAWTEVFLGGTSSMVTAAVSAGLAISAFSCRLAPPGTVE 243 Query: 250 LSGVDGLPPLPDTEYLL--CYDPSSNNELAQVIYQAMESYHNPWQYSP 295 +S GLPPLP +E ++ S + E + + A H P SP Sbjct: 244 VSQRFGLPPLPSSEIIMFSTLTDSRSREALRTLAAAFRE-HRPGPISP 290 >UniRef50_A6WG79 Transcriptional regulator, LysR family n=2 Tax=Actinomycetales RepID=A6WG79_KINRD Length = 297 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 81/295 (27%), Positives = 138/295 (46%) Query: 1 MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR 60 M + P + LRTF+AVA ++F AAA + QS VSQ +++LE VG++L R Sbjct: 1 MTTGQGPTTTFEPVQLRTFLAVAQTHSFTQAAARLGVRQSTVSQHVRKLEDAVGRQLVHR 60 Query: 61 HGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNR 120 + LT G ++G+AR IL +++A + + G L IG SD+ A T LP +L Sbjct: 61 DTHSVTLTPDGEAMIGFARSILASHEQAAAYFTGARPVGRLRIGMSDDLALTRLPAILRD 120 Query: 121 VSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYI 180 P++ L++ V ++ + LE+ +D+ + P + + +R W + Sbjct: 121 FRGENPRVDLELTVDQSGTLHRRLENDRLDIFIGKRPPRSGEGKLVRRERLVWVGNSSTR 180 Query: 181 LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 L +P+PL + PS + L++ I +R A V + + AAV +G+GV+ Sbjct: 181 LDLSQPVPLAVYPSPSISGAAMHEALDRVGIGYRSACVCRGVNGLIAAVASGIGVSCLAS 240 Query: 241 EMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSP 295 ++ L L LP L + +L +P + + A A P +P Sbjct: 241 SLVPVQLVALGPQHKLPELGQIDLVLLTNPRTRDRPASRALAAAVLSSGPSSLAP 295 >UniRef50_B2IL42 Transcriptional regulator, LysR family n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IL42_BEII9 Length = 281 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 82/254 (32%), Positives = 127/254 (50%), Gaps = 16/254 (6%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 I +L LLR+FVAV D + A AA V R++SA+S QM RLE +VG+ LF R GR + Sbjct: 2 IPDLPSPLLRSFVAVVDCGSLATAAVRVGRSESALSLQMSRLENIVGQPLFDRDGRALKV 61 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 + G LLG+AR ILR D A + L + ++ +G + +L L + + P Sbjct: 62 NQVGSHLLGHARAILRRIDAARAELGPAATP-LIRVGVVQDFVVPVLRPTLIDLRATNPN 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 ++ + A + + + +D + P KA+ + P W+ + + + E + Sbjct: 121 TTFEIVIGSTAELLQAMGEDRIDTALCADDPGRGKAVT--SFPMEWFGKPDLLAE--EVL 176 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PLV + P PF L+ WR+A V +L +R AV+AGLG+ +R E+ Sbjct: 177 PLVSITPPCPFLKAAQQALDAIGWSWRIALVTPSLDGLRTAVEAGLGIASR-TEV----- 230 Query: 248 RVLSGVDGLPPLPD 261 G+ GLPPL D Sbjct: 231 ----GI-GLPPLSD 239 >UniRef50_D1XET8 Transcriptional regulator, LysR family n=1 Tax=Streptomyces sp. ACTE RepID=D1XET8_9ACTO Length = 307 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 76/230 (33%), Positives = 123/230 (53%), Gaps = 6/230 (2%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +L ++ LR VAV + F AA + TQ AVSQQ+++L L+ + +FA GR+ L+ Sbjct: 4 DLQINRLRALVAVVEHGGFRRAAEVLHITQPAVSQQIRQLSGLIKRPVFASTGRDMRLSP 63 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL YAR+++ NDEA + + Q +L++G + + A+ +LP L R++ P++ Sbjct: 64 QGEELLEYARRMVALNDEAVARFVPEVGQVLLSVGVTSQLAE-VLPEFLRRINRELPQVQ 122 Query: 130 LDVRVKRNAYMAEMLESQEVD--LMVTTHRPS-AFKALNLRTSPTHWYCAAEYILQKGEP 186 L VR + +AE L + ++D L++ T P L L W+ + + Sbjct: 123 LRVRTGASEALAEQLRTGQLDAALLLQTGPPDPGPDGLELGRMRMAWF--GRPATGEHDA 180 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 +PL L P R V L++A I R+AY L +R+A KAGLG+T Sbjct: 181 LPLALFPAPCTLRKEVGEVLDRAGIRRRIAYEGPELIGLRSAAKAGLGMT 230 >UniRef50_A5VE27 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VE27_SPHWW Length = 288 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 84/276 (30%), Positives = 137/276 (49%), Gaps = 1/276 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD L++F AVA F A A++ QS VS+ +++LE G LF R + LT Sbjct: 2 LDPSWLKSFAAVARTLNFTLAGASLNLRQSTVSEHVRKLEAAAGTRLFVRDTHSVRLTVD 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LG+AR IL ND A ++L+G + +G +++ LP LL + ++ +P +AL Sbjct: 62 GEAMLGFARSILEANDRALRHFARTDLRGSVRLGVTEDVVLAGLPELLRQFTAEHPHVAL 121 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 ++ V + + E LE +DL R S + + P W A ++IL P+PL+ Sbjct: 122 ELVVGLSEDVREKLELGMLDLAFIKRRASDKQGERVWREPLVWIAAPDFILDAKAPVPLI 181 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 +L P+ R L L W + + T + AAV AGLGV ++ P L + Sbjct: 182 VLAPPAITRTAALTALETIGGHWHIVCTSGTQSGIHAAVAAGLGVAPHARSLVPPGLDEV 241 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 S + LPPL D E+++ + A+ + +A++ Sbjct: 242 SSPE-LPPLGDVEFVVLAGRQGHRGPARALAEAIKK 276 >UniRef50_C1DJQ4 LysR family transcriptional regulator protein n=2 Tax=Bacteria RepID=C1DJQ4_AZOVD Length = 317 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 76/229 (33%), Positives = 113/229 (49%), Gaps = 3/229 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 LD+ LLRTF+ V D FA AA + T SAVS ++RLE G L AR R LT+ Sbjct: 27 TLDIVLLRTFLEVVDSGGFALAAERLALTPSAVSGHIKRLELAAGDTLLARTTRRLDLTQ 86 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G L YAR I+ EA + L S +QG L +GAS++ A T LP +L +P+ + Sbjct: 87 AGETLYAYARNIVDLEREARARLRGSTIQGRLRVGASEDFAGTWLPQVLQGFHRWHPQAS 146 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTH--RPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 ++++V A + E +D++ R + L R P W A+ E + Sbjct: 147 IELKVGITADLLRQQERGHLDVVFGKRCSRTNGEGELLWR-EPLVWAYASACAADLAEAL 205 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 PL + +P +R+ LA L PWR+ + + ++ +A AG VT Sbjct: 206 PLAVFPEPCIYREAALAALGSVARPWRVVFESGSMAGCLSAALAGFAVT 254 >UniRef50_B9YZG6 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YZG6_9NEIS Length = 290 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 83/277 (29%), Positives = 132/277 (47%), Gaps = 4/277 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 ++ + L+RTFV VAD AA+ + R S +S Q+ RLE LV L R LT Sbjct: 3 DIPIPLMRTFVVVADTLNLTTAASRLHRAPSTISMQLNRLEALVTAPLLERGQYGVRLTA 62 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G QL +A ++L +D S +N+ G + +G D A L LL YP+ Sbjct: 63 AGEQLRTHAHQLLSLHDRILGSFQNANITGKVRLGTHDLYATRALTPLLEAYMLSYPEAW 122 Query: 130 LDVRV-KRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 L+V R Y+A ++ ++DL + + L L W A + + + P+P Sbjct: 123 LEVTCDHRPHYLASLVNEGQLDLALVEMPALSDGGLRLCRDQLIWVRAETHPVHQRTPLP 182 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 LVL + +R+ L +D P+R+A+ + + V AAVKAG+GV P + L Sbjct: 183 LVLFPEGCYYRETATRALQLSDRPYRVAFTSHSRGGVLAAVKAGIGVGITPRTTVEEGLV 242 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 ++ G LP LP T+ L + + NE ++ Q ++ Sbjct: 243 IIEG--ELPSLPQTDTTL-FIADNVNEATTLLAQTIK 276 >UniRef50_UPI0001904674 transcriptional regulator, LysR family protein n=1 Tax=Rhizobium etli IE4771 RepID=UPI0001904674 Length = 216 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 64/181 (35%), Positives = 102/181 (56%), Gaps = 1/181 (0%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 N++ LLRTFV +A+ +F +A + RTQSA++ QMQ+LE+++G +L R GR+ LT+ Sbjct: 13 NIETSLLRTFVTIANTGSFTRSAQILFRTQSAITMQMQKLEEILGCKLTYRSGRSLSLTD 72 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LL YA +ILR NDE S L + + +G SD+ A +LP +LN S+ +P + Sbjct: 73 EGDALLPYAVEILRLNDELQSDLKSMKQREEIRVGTSDDYAVILLPEILNEFSAAHPNVT 132 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVT-THRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 + V E L+ E+D+++T +H ++ RT W ++E + EP Sbjct: 133 MTVNCSNRDQNLEKLKKGEIDILLTPSHGRTSKWEKRSRTERLLWVGSSETEISDSEPSS 192 Query: 189 L 189 L Sbjct: 193 L 193 >UniRef50_D1VDU1 Transcriptional regulator, LysR family n=2 Tax=Actinomycetales RepID=D1VDU1_9ACTO Length = 291 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/227 (31%), Positives = 111/227 (48%), Gaps = 1/227 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD+ LR+ ++AD F AA ++ +QSAVSQ ++RLEQ+ G+ L R G T Sbjct: 5 LDIVALRSLTSIADSGGFRRAADSLHLSQSAVSQHIRRLEQVCGRPLVRRGGNRAQFTPE 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L+ ARKIL +D+A L ++ L IGA++ +AD +LP + R+ + +P ++ Sbjct: 65 GELLVAEARKILAAHDDALGRLQAADSGRTLVIGATEHAADLLLPSITARLRTSFPDCSV 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEP-IPL 189 R+ R + + L+ +D + P WY A + L +G IPL Sbjct: 125 RFRIDRGKQLNDRLDEGALDASLFMGDVRGRDVSPAGALPLAWYAAPGWHLPEGRGDIPL 184 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 V +D+P R L L + + A L V A +AGLGV Sbjct: 185 VAIDEPCTIRRRALKVLGDSGQAGSVVCEAGHLAGVLHAARAGLGVA 231 >UniRef50_B4EHW5 LysR family regulatory protein n=20 Tax=Proteobacteria RepID=B4EHW5_BURCJ Length = 285 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 80/259 (30%), Positives = 126/259 (48%), Gaps = 5/259 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 LD++ ++ FV ADL +F AA + TQSAVS +++RLE +G+ L R R L+ Sbjct: 3 TLDIEAVQAFVLTADLKSFTRAAEVLDTTQSAVSLKIKRLEDGLGRRLLERTPRQVRLSA 62 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G L AR+++ + A S+ F Q L IG S LP LL R+S P L Sbjct: 63 DGTAFLEPARELVAAHHGAISA--FGTSQRRLVIGVSHHVVGADLPMLLRRMSEAEPALV 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVT-THRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 L++RV + + + + ++D V H + + W AA++ + +P+ Sbjct: 121 LEIRVAASRDVLDAFDRGQLDAAVALQHDSRRLDGETILSESFGWMAAADFEYRPPQPLR 180 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L +P R M + L++A + W +V + + AAV AGL V A ++P Sbjct: 181 LATQAEPCSVRRMAVDALDQAGVAWTEVFVGGGVATIGAAVSAGLAVAALG-HRVAPAGT 239 Query: 249 VLSGVD-GLPPLPDTEYLL 266 V G+ GLPPLP + +L Sbjct: 240 VDVGMRYGLPPLPTRDVVL 258 >UniRef50_Q399U1 Transcriptional regulator, LysR family n=8 Tax=Burkholderia cepacia complex RepID=Q399U1_BURS3 Length = 284 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 85/270 (31%), Positives = 130/270 (48%), Gaps = 6/270 (2%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 LD+DLLRTF AVA L F AAA V R+ S+V+ Q+Q+LE++V + LF R+ + LT+ Sbjct: 4 TLDVDLLRTFHAVAKLGRFKDAAAHVNRSPSSVTAQIQKLEEMVAQRLFTRNNQAVELTQ 63 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 +G +LL + L +D SL L G L +G D A + L R ++ P L Sbjct: 64 YGHKLLSDTTEFLLSHDRLVESLSPQILTGKLRLGIPDSYAAHFMAEFLPRFAADRPLLE 123 Query: 130 LDVRVKRNAYMAEMLESQEVDLMV-TTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 L V + + + + ++D+ + + L +T P W A + P+P Sbjct: 124 LTVEARSSEELQSLFSRGQLDITIAVVQKVPPHGELLSKTHPV-WVAARTFKFNPDAPLP 182 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 + + P+RD L L KA I R+ +++ PAV A + GL V + +S +L Sbjct: 183 IAVQLQGCPYRDTALNALKKAKISHRMLLESASSPAVEACIANGLAVGLIEHDRVSGNLT 242 Query: 249 VLSGVDG--LPPLPDTEYLLCYDPSSNNEL 276 S V G LP LP + D S+ L Sbjct: 243 --SHVAGIVLPDLPPHLITILTDDSNRAAL 270 >UniRef50_Q1LIS5 Transcriptional regulator, LysR family n=35 Tax=cellular organisms RepID=Q1LIS5_RALME Length = 345 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 86/289 (29%), Positives = 130/289 (44%), Gaps = 14/289 (4%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 + D LRTFVAVAD + +AAA + +QS+VS+Q+++LE+ G L R + +T Sbjct: 52 GFETDQLRTFVAVADSGSLSAAAPRLFLSQSSVSEQLRKLEERAGVPLLTRGKKGAAVTP 111 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL YAR+IL N+ A L +L G L + +D + +L R+ YP L Sbjct: 112 AGARLLEYARRILSLNELAMQELRGQSLDGELRLAVTDYFRPGEIAGMLRRLRDRYPYLK 171 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTH--RPSAFKA--------LNLRTSPTHWYCAAEY 179 L V V ++A + E E D+ ++ R A + LR W A E Sbjct: 172 LHVTVMKSAAIEAAAEMDEFDIGLSMRLIRSGGDAAPHERRKSGVVLRREALAWVAAPEI 231 Query: 180 ILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARP 239 +PLVLL D V+ L + + + + AS + + A+ AGLGV+ Sbjct: 232 AESPQATLPLVLLPDTCSMHQFVVQLLKRRRRAFDIGHSASGVAGLHLALAAGLGVSCLN 291 Query: 240 VEMMSPDLRVLSGVD----GLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 + P + L LPPLP E+ L +E QA+ Sbjct: 292 ASAIGPGVAPLDAAATAGWKLPPLPSAEFYLLGARRGESEFIGQARQAL 340 >UniRef50_C8Q8U4 Transcriptional regulator, LysR family n=1 Tax=Pantoea sp. At-9b RepID=C8Q8U4_9ENTR Length = 290 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 79/276 (28%), Positives = 127/276 (46%), Gaps = 8/276 (2%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 D++ LR+FV D + AAA C +QSA+S+Q+++LEQ + L R T Sbjct: 3 TFDMEQLRSFVTAVDAGSLTAAAPQRCLSQSALSEQLRKLEQRANQTLLVRSKSGVTPTA 62 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL +AR +L D A L L G + +G +D + LL R + YP+L Sbjct: 63 AGEKLLHHARHLLALADVAWRDLQGVTLSGEIRLGITDYCRPDAIVALLARYARDYPQLR 122 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPS------AFKALNLRTSPTHWYCAAEYILQK 183 L + ++A + + ++DL V P A L P W A+ L Sbjct: 123 LRTTMGKSAEIDAAWQRGDLDLAVVMRVPGLSRVGEAKAETRLFCEPLLWVSASA--LSW 180 Query: 184 GEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMM 243 +P+PLVLL + L++ PW + +++S + ++ AV AGLG+ M Sbjct: 181 VQPLPLVLLPEGCMLHRAACQALSREHHPWFVRHISSGVRGLQDAVAAGLGIACLNRSAM 240 Query: 244 SPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQV 279 + V+ LP LP+ E++L P+ +E Q Sbjct: 241 PREGVVVVQQPSLPRLPEAEFVLLSRPADQSEFGQT 276 >UniRef50_B4E8W5 LysR family regulatory protein n=25 Tax=Burkholderia RepID=B4E8W5_BURCJ Length = 310 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 85/256 (33%), Positives = 121/256 (47%), Gaps = 3/256 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD+ LLRTF+ V D FA AA + T SAVS ++RLEQ G L AR R LT Sbjct: 24 LDIALLRTFLEVVDRRGFAPAAERLALTPSAVSGHIKRLEQAAGTVLLARTTRRIALTPA 83 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L YAR I+ E + L + G L +GAS++ A LP +L +P ++ Sbjct: 84 GDTLYAYARNIVDMEREVRARLRGAPAHGPLRVGASEDFAGAWLPHVLRTFRDRHPHTSI 143 Query: 131 DVRVKRNAYM--AEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 +++V A + +ML +V + A L L P W AA+ L G +P Sbjct: 144 ELKVGITASLLREQMLGRLDVVFGKQCRQVDAPGEL-LWEEPLVWAFAADRPLDAGGEVP 202 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L L P +R+ +A L A P+R+ + + ++ +A AG VTA + LR Sbjct: 203 LALFPQPCVYREAAVAALAAALRPFRVLFESGSMAGCVSAALAGFAVTALARSQLRDGLR 262 Query: 249 VLSGVDGLPPLPDTEY 264 DGLP LP + Sbjct: 263 ECGPQDGLPALPAARF 278 >UniRef50_A0NS29 Transcriptional regulator, LysR family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NS29_9RHOB Length = 278 Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 85/291 (29%), Positives = 140/291 (48%), Gaps = 25/291 (8%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + +LD+DLLR FV V++ +F A +QSAVS ++++LE +G L +R R+ L Sbjct: 1 MTDLDMDLLRAFVRVSETGSFTRAGQMTGASQSAVSVKIKKLEDRLGNTLLSRSPRSVRL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G + L AR ++ +D + + ++Q L G SD +A LP ++ +S P+ Sbjct: 61 TSFGARFLNDARSLIDLHDSVTARISGPSVQKRLRCGISDHAAGGNLPAIIAALSKALPE 120 Query: 128 LALDVRV----------KRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAA 177 L V V K + A M+ S++V+ T R AF+ NL W + Sbjct: 121 HRLHVAVGYSDTLYTDFKAGLFSAVMVRSEDVE---GTGRV-AFEE-NL-----VWTASR 170 Query: 178 EYILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA 237 E+ + G +PLV L + R + TL A I + A+ + + A++AAV AGLG+ Sbjct: 171 EFAWKAGAALPLVALSETCALRRLAEGTLKDAGISYEDAFTGTGVGAIQAAVSAGLGIAC 230 Query: 238 RPVEMMSPDLRVLSGVDGLPPLPDTEY-LLCYDPSSNNELAQVIYQAMESY 287 + R + + LP LP T+ L C + +++A I A + Sbjct: 231 LDRRNIPAGCREVGDLFQLPVLPKTKMTLFCRE----DDIASAILGAFRDH 277 >UniRef50_Q5QVA7 Transcriptional regulator, LysR family n=2 Tax=Idiomarina RepID=Q5QVA7_IDILO Length = 280 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 70/254 (27%), Positives = 127/254 (50%), Gaps = 7/254 (2%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +L L+ LR+F AV +L + A + R+Q A+S Q+++LEQ +G EL R G LT Sbjct: 3 HLSLEALRSFSAVIELGSMTLAGERMGRSQPAISLQLKKLEQQLGVELLTRQGSGFALTA 62 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G L YA+++L ND+A + + G + +G + E A ++LP +L + + VYP++ Sbjct: 63 DGDVLFDYAQRMLALNDQAWAQFEPQQVSGKVRLGITSEFASSLLPKVLGQFAQVYPQVT 122 Query: 130 LDVRVKRNAYMAEMLE--SQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 L V +A ++L Q+ D+++ + + ++ W + Q G Sbjct: 123 LQV---TSALSKDLLSGLGQQFDIILALREQTNKSDVLIQREELVWVGLPGLLEQPG--W 177 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 P+V+ + +R +L +A P+R+ Y + + AA+ +GLG+T + D+ Sbjct: 178 PMVVAPEGCIYRRRAEQSLQRAHQPYRITYTNTDFSGLTAALNSGLGITVLAKSTVPKDI 237 Query: 248 RVLSGVDGLPPLPD 261 +L PLP+ Sbjct: 238 PILESFSDNKPLPN 251 >UniRef50_B7KTE5 Transcriptional regulator, LysR family n=8 Tax=Rhizobiales RepID=B7KTE5_METC4 Length = 295 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 80/237 (33%), Positives = 125/237 (52%), Gaps = 1/237 (0%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 NLDLDL+RTFV + + TFA AA V RT SA+S Q++RLE+ +G+ LF R R + T Sbjct: 8 NLDLDLIRTFVTICEAGTFARAAERVGRTPSAISLQVKRLEERLGRALFLRQPRAVVPTA 67 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LLG R++L NDE + ++G + GA +S LP +L R ++ +P++ Sbjct: 68 DGEALLGLGRRLLALNDEVVTFFDAPPMEGRVRFGAPHDSGLFALPAMLRRFAATHPQVE 127 Query: 130 LDVRVKRNAYMAEMLESQEVDLMV-TTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 +DVR+ + + E + +DL++ H PS A + + W + + P+P Sbjct: 128 VDVRLDASRLLVEAIADGALDLVLFAGHLPSDRAAQVVHSEDLVWVGLRGGLAEARRPLP 187 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSP 245 L L +R L L++A I +R+AY + AAV+A L V P+ + P Sbjct: 188 LALCQSGCTWRAAALDALDQAGIAYRVAYTSEHCQGQIAAVEADLAVAPLPLSVARP 244 >UniRef50_C5CZ98 Transcriptional regulator, LysR family n=6 Tax=Proteobacteria RepID=C5CZ98_VARPS Length = 289 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 77/255 (30%), Positives = 132/255 (51%), Gaps = 8/255 (3%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 + +D LR VAV D + +AAA V R+QSAVS Q+++LE +G+ + R R+ +T Sbjct: 5 DFQIDWLRALVAVVDAGSLSAAAPLVHRSQSAVSMQIKKLENALGQAVLLRGPRHLEVTP 64 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G QLLGYAR++L E +++ L G + +G D+ A T L +L + Y + Sbjct: 65 AGAQLLGYARRMLELQSETQNAMFGPELAGRVRLGVPDDYASTYLTPVLRSFAGRYKGVE 124 Query: 130 LDVRVKRNAYMAEMLESQEVDL-MVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 +++ +++ + + E+DL +V+ +P + L P W A++ + P+P Sbjct: 125 IELTCEQSTSLIPKIARGELDLALVSRDKPQ--RGQLLFQEPLVWVGTAQHEAWRRNPLP 182 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 + + + S R L++L +R+ Y +S+L AAV++GL V + P L+ Sbjct: 183 IAVYEAGSMARTAALSSLAARRRAYRIVYHSSSLAGQLAAVESGLAVAVFTRCSVPPHLQ 242 Query: 249 VL----SGVDGLPPL 259 +L SG D LP L Sbjct: 243 ILQNLPSGFD-LPRL 256 >UniRef50_Q1LFM9 Transcriptional regulator, LysR family n=23 Tax=Proteobacteria RepID=Q1LFM9_RALME Length = 288 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 108/203 (53%), Gaps = 2/203 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDLD ++ FV +ADL +F AA A+ TQ+AVS ++QRLEQ + L R R L+ Sbjct: 6 LDLDAVQAFVRIADLGSFTRAAEAMRTTQAAVSLKLQRLEQRLDCRLVERTPRYVALSAQ 65 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G+ L +AR++L ++ A + + + + L IG SD A LP L+ R+++ P+L + Sbjct: 66 GVAFLEHARELLEVHERALAGM--TGRRQRLVIGISDHVAGPELPALIARMNAQNPQLLI 123 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 ++R+ + + + + +E+D ++ L W+ A + + G+P+PL Sbjct: 124 EIRIGSSGDLLQSFDRRELDTVIVRLHVGRSDGEFLTDEKFGWFAAPSWKHRAGDPLPLA 183 Query: 191 LLDDPSPFRDMVLATLNKADIPW 213 L +P R M L+ A +PW Sbjct: 184 TLAEPCGVRAMAGQFLDAAGVPW 206 >UniRef50_A9BWM0 Transcriptional regulator, LysR family n=6 Tax=Proteobacteria RepID=A9BWM0_DELAS Length = 300 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 79/265 (29%), Positives = 137/265 (51%), Gaps = 8/265 (3%) Query: 3 SANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHG 62 + N P +L +D LR VAV D + +AAA + R+Q+AVS Q+++LE +G+ + R Sbjct: 4 AVNHP--DLQIDWLRALVAVVDAGSLSAAAPLLHRSQAAVSMQIKKLETALGQPVLLRGP 61 Query: 63 RNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVS 122 R+ LT G +LLGYAR++L +A ++L +L G + +G D+ A T L +L + Sbjct: 62 RHLQLTPAGAELLGYARRMLELQAQAQAALFGPDLSGRVRLGVPDDYASTYLTPVLRSFA 121 Query: 123 SVYPKLALDVRVKRNAYMAEMLESQEVDL-MVTTHRPSAFKALNLRTSPTHWYCAAEYIL 181 Y + +++ +++ + + +DL +V+ RP + L P W A ++ + Sbjct: 122 GRYQGVEIELTCEQSTALIPQVVRGTLDLALVSRDRPQ--RGRLLFHEPLVWVGAPQHEV 179 Query: 182 QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVE 241 + P+P+ + + S R L++L R+ Y +S+L AAV++GL V Sbjct: 180 WRKNPLPIAVYEAASLARTAALSSLAAQRRAHRVVYHSSSLAGQLAAVESGLAVAVFTRC 239 Query: 242 MMSPDLRVLSGVDG---LPPLPDTE 263 + P L+VL + LPPL E Sbjct: 240 SVPPHLQVLQNLPAGFELPPLVSME 264 >UniRef50_Q3J596 Transcriptional regulator, LysR family n=37 Tax=Rhodobacterales RepID=Q3J596_RHOS4 Length = 322 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 81/255 (31%), Positives = 119/255 (46%), Gaps = 6/255 (2%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 NLDL LR+FVAVAD AA + TQSAVS Q++RLE+ + L R R LT Sbjct: 15 NLDLTALRSFVAVADAGGVTRAAGFLNLTQSAVSMQIKRLEETLDLALLDRSARRVALTA 74 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G QLLGYAR +L NDE L + +G + +G + +P +L R S+ +P++ Sbjct: 75 AGEQLLGYARWMLALNDEVFGRLTHDDFEGEVVLGVPHDIVYPAIPQVLQRFSAEFPRMR 134 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 + + + E D+++TT L P W A K P+ L Sbjct: 135 VTLLSSYTRKLKSQFARGECDVIMTTEDTVEPGGETLVELPLVWVGAPGGQAWKQRPLRL 194 Query: 190 VLLDDPSP-FRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 +P+ FR V + L+ A IPW +A + + + A+V A L V V + + R Sbjct: 195 AF--EPNCIFRMGVQSALDAAGIPWTMAVESDSSRTIEASVSADLAVH---VSLAGAEPR 249 Query: 249 VLSGVDGLPPLPDTE 263 + + LPD E Sbjct: 250 YMERIPHGGTLPDLE 264 >UniRef50_D2LGY9 Transcriptional regulator, LysR family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LGY9_RHOVA Length = 311 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/263 (28%), Positives = 128/263 (48%), Gaps = 7/263 (2%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR-HGRNKLLTE 69 + L+ LR FV VA+ +FA A+ + RTQSAV+Q +++LEQ++ L R G LT Sbjct: 16 ITLEQLRAFVMVAEGGSFAGASLDLGRTQSAVTQSLKKLEQILDCVLLERRQGHFAGLTI 75 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G + L A++IL +A S L G + +G D+ + +L+R + P+L Sbjct: 76 EGARFLPMAKEILARLSDAVGSFQRPPLAGRIRLGVPDDFDVLDIHGVLSRCLDMNPELR 135 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTT----HRPSAFKALN--LRTSPTHWYCAAEYILQK 183 ++V + + +M + E+D+ + P+ A LR+ P W + L + Sbjct: 136 IEVTSAMSGTIVDMFNAGEIDVALLNRARGESPNVGGAPRKVLRSEPLFWVGREKSALGQ 195 Query: 184 GEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMM 243 +PLV +R +L + + P LAY +S+ +R AV AGLG+ P + Sbjct: 196 FSTVPLVGFPGGCTYRKTMLLAMQRVGKPSYLAYTSSSYENIRKAVSAGLGIAVLPRGSV 255 Query: 244 SPDLRVLSGVDGLPPLPDTEYLL 266 D +L + PPLP+ E ++ Sbjct: 256 GRDHVILGAEEDFPPLPEAELVM 278 >UniRef50_B6R8G5 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R8G5_9RHOB Length = 292 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 77/257 (29%), Positives = 128/257 (49%), Gaps = 9/257 (3%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDLD LRT V +AD +F AA + +TQSA+S QM+R+E + + +F R GR+ LTE Sbjct: 5 LDLDSLRTLVMIADTGSFTRAAEELDKTQSAISMQMRRMEDKLERTIFRREGRHSKLTED 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LL +AR++LR NDE + + G + +G ++ +T ++ S PK Sbjct: 65 GELLLRHARQMLRLNDETLAMFSEREVTGKVRLGLAEGIDETRTAKIIFEFSKNNPKAEA 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALN-----LRTSPTHWYCAAEYILQKGE 185 + A + + LE+ E+DL + A +A N L + W + + L + Sbjct: 125 SIVCAPAADLRKALEAGELDLAIIG--SLADEAENAEGSVLSSERLVWAAGSNFKLASEK 182 Query: 186 PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARP-VEMMS 244 +PL + + R + L D +R+ Y +S V +G+ +T +P ++S Sbjct: 183 ELPLAVGLEQCRIRKAAVEALEDDDRAFRIQYSSSNPGLVEMTAASGMAITIQPRSSLVS 242 Query: 245 PDLRVLSGVDGLPPLPD 261 D +L ++GLP LP+ Sbjct: 243 SDAGLLE-LEGLPKLPN 258 >UniRef50_B1MM13 Putative LysR-family transcriptional regulator n=2 Tax=Corynebacterineae RepID=B1MM13_MYCA9 Length = 294 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 89/282 (31%), Positives = 132/282 (46%), Gaps = 18/282 (6%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD +LLRTF+ V F AA + QS VS + RLEQ VG+ELF R RN T Sbjct: 2 LDPELLRTFLTVERAGGFTAAGRILGLRQSTVSGHIARLEQSVGRELFRRDTRNLAPTAD 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G ++G+AR IL +A S L G++ +GASD+ LP +L + +P + L Sbjct: 62 GAAMVGFARSILDAQAQADRFFASSELTGLIRLGASDDLVARELPDVLVEFQNSHPGVDL 121 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 ++ V + Y+ + + E+DLMV P L W + ++ G P Sbjct: 122 ELVVGLSEYLKTRMTAGELDLMVAKRLPGETHGELL------WR---DKLVWAGRPNTHH 172 Query: 191 LLD--------DPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEM 242 + D PS R L L + WR+A V+ + +RAA AG+GV A + Sbjct: 173 VRDPVPVVTYPPPSLTRHAALRALEREGRTWRIACVSDSQLGLRAAALAGMGVIAHAESL 232 Query: 243 MSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 + L +S D LP L + E++L S +E Q + A+ Sbjct: 233 LPSGLVKVSD-DSLPDLGELEFVLLRRRSVLSEPEQALCDAI 273 >UniRef50_Q1QTI0 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=Q1QTI0_CHRSD Length = 315 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 72/242 (29%), Positives = 110/242 (45%), Gaps = 1/242 (0%) Query: 19 FVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQLLGYA 78 FV VAD F AAA + +TQS +S ++ LE +G L R R LT G L YA Sbjct: 40 FVTVADSGGFTAAARYLHKTQSTISLRISTLESRLGTLLIERGSRRLTLTGDGETFLVYA 99 Query: 79 RKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVRVKRNA 138 R++L+ EA ++L S L G ++ ADT LP LL R + +P + + + + + Sbjct: 100 RRLLQLQREAIAALGRSQ-PVTLRFGIPEDYADTWLPALLERFGARHPDVHVHIHCRMST 158 Query: 139 YMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLVLLDDPSPF 198 + E LE +D+++ + + T W + L G PIPL L + + Sbjct: 159 ELLEQLEKGSLDIVLAVQHAADSGGRPVATEDVVWAAHRRFALDPGRPIPLALFPEQCIY 218 Query: 199 RDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGVDGLPP 258 R LA L W+L + + +R V G +T + D + L +GLP Sbjct: 219 RRRALAALAGIGRDWQLDSTSQSPSGLRVIVNQGQTLTVTDRRSLPEDWQALGEEEGLPS 278 Query: 259 LP 260 LP Sbjct: 279 LP 280 >UniRef50_Q15PU3 Transcriptional regulator, LysR family n=4 Tax=Alteromonadales RepID=Q15PU3_PSEA6 Length = 283 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 69/228 (30%), Positives = 108/228 (47%), Gaps = 2/228 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 L LD LRTFV V DL +A A + R+Q A+S Q++RLE + K LF++ G+ + Sbjct: 4 LSLDNLRTFVTVIDLGGYAKAGEYLGRSQPAISLQIKRLESQLNKRLFSKAGQRHEVNHD 63 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G+ L A+ +L NDE ++++G L +G E A T+LP ++ S +YP ++L Sbjct: 64 GLNLYHQAKNMLAINDEIFRQFEPASIRGRLRLGIPSEFATTLLPSIVGEFSKLYPDVSL 123 Query: 131 DVRVKRNAYMAEMLESQEVDL-MVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 +V + + + Q+ DL M L W + L Sbjct: 124 EVTSALSKSLLSENQRQDFDLIMALLPHNQTVDGELLLDDDLVWVGNRNQNF-TNNTLSL 182 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA 237 VL D +R V+ L + WR+ Y + L + AA+ GLG+TA Sbjct: 183 VLAPDGCMYRSRVIQALKQQTTQWRITYTNADLAGITAAINQGLGITA 230 >UniRef50_B7KZZ4 Transcriptional regulator, LysR family n=11 Tax=Bacteria RepID=B7KZZ4_METC4 Length = 289 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 18/266 (6%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 NL++D +R+F+AV + +F AAA + QS VS + RLEQ +G+ L R LT Sbjct: 3 NLNVDQIRSFLAVLESGSFTAAAQTLGLQQSTVSGHIARLEQALGRSLLMRDTHRVALTP 62 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G ++G+AR +L +D + L+G + +G S++ + L +L R + +P + Sbjct: 63 DGQAMIGFARDVLEAHDRLRAFFSPGGLRGRIRLGVSEDYTLSALAQVLARFADGHPSVD 122 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEP--- 186 L + V + + + ++ E+D++ R R P AE ++ G P Sbjct: 123 LQLTVGLSRALYQGYDAGELDVIFCKRR---------RGDPRGELAWAEELIWVGRPGFA 173 Query: 187 ------IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 +PLVL PS R + L L A WR+A + +L +RAAV+AGLG+ Sbjct: 174 PDPALPLPLVLYPPPSITRTLALDALEAAGRSWRIACTSGSLMGLRAAVEAGLGIAPHSA 233 Query: 241 EMMSPDLRVLSGVDGLPPLPDTEYLL 266 ++ P L + GLPP+ + E+++ Sbjct: 234 QVTPPGLAPIPETAGLPPIGEVEFVV 259 >UniRef50_D2L1M2 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L1M2_9DELT Length = 297 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 84/261 (32%), Positives = 119/261 (45%), Gaps = 1/261 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 D LR AV D F AAAA +C+TQ+AVS + LE+ G L R + T Sbjct: 6 FDTQALRPLAAVVDAGGFTAAAAGLCKTQAAVSAAIAGLERAAGCRLLQRSRQGCRPTPA 65 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G ++GYAR+IL DEA +L + G L +G DE ++ ++ ++ P+ + Sbjct: 66 GEMVVGYARRILSLLDEAAVALETAKPAGTLRLGVPDEGVAGLVASVVEGLARDCPQGLV 125 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 D+R +A + L + E+D +V P + + + W P+P+ Sbjct: 126 DLRCDLSAGLEAALMAGELDAVVVVREPGSARGELVFRDRLVWCVPPGREPHLSRPLPVA 185 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 L + R MVLA L A I WR AS + + A GL VTA + RVL Sbjct: 186 LFAEGCRTRPMVLAALASAGIAWREVCRASHIAGLTAMAGRGLAVTALARRTVPQGWRVL 245 Query: 251 -SGVDGLPPLPDTEYLLCYDP 270 SG GLP LPD E L P Sbjct: 246 SSGEGGLPVLPDYEAALILPP 266 >UniRef50_Q4ZVH5 Regulatory protein, LysR:LysR, substrate-binding n=5 Tax=Pseudomonas syringae group RepID=Q4ZVH5_PSEU2 Length = 284 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 79/281 (28%), Positives = 145/281 (51%), Gaps = 8/281 (2%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD++L+RTF AVA + F+AAA + ++ +AVS +QRLE + G L R + LT Sbjct: 5 LDIELVRTFHAVARIGKFSAAAEQLHKSPAAVSVHIQRLEAVAGGRLLNRDNQAVSLTAL 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LL ++L +D + L ++L G +T+G DE A ++ +L ++ +P + L Sbjct: 65 GKRLLLSTTELLSTHDRVLADLQGTHLAGRITLGVPDEYAVHVIRDILPVFAAAWPNVVL 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTH---RPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 +++ + + E + ++ V + SA + T P W A L +P+ Sbjct: 125 EMKSAPSYALREQVARGKLQTAVIAQPKGQLSADAQFLVSTKPV-WVGPASVALASADPV 183 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL + P+R+ +LA+L R+ + + A++A V+AGL ++ ++ + Sbjct: 184 PLAVHAAQCPYREAMLASLKDNGRKIRVVLESPSNQAIKACVEAGLAISLIDRSGVTQAM 243 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSS-NNELAQVIYQAMESY 287 ++L D LP +P+ E + PSS N+E ++ QA++ Y Sbjct: 244 QIL---DDLPEIPEHEIVFLRSPSSQNDEAVSLLAQALQKY 281 >UniRef50_B2II45 Transcriptional regulator, LysR family n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2II45_BEII9 Length = 287 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 71/269 (26%), Positives = 131/269 (48%), Gaps = 4/269 (1%) Query: 16 LRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQLL 75 L+TF+ +A+ ++F+ + QS VS +++LE+++G +LF R + LT G L+ Sbjct: 7 LQTFLHIAEGHSFSETGRRLGIRQSTVSDHVRKLEEILGHQLFVRDTHHVTLTLEGEALV 66 Query: 76 GYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVRVK 135 +A IL D A + L+G L +G +++ + LP +LN +P++ L + Sbjct: 67 AFATGILAAQDRALRHFAGTKLRGRLRLGVTEDLILSWLPQILNDFVQKHPQIDLSFTIA 126 Query: 136 RNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLVLLDDP 195 + + + ++ E+DL++ + L W A + + L+L P Sbjct: 127 LSNVLIQRFDAGELDLVLCKRWAGEERGELLWRDQVVWVGANPAPISANGQLLLILYPAP 186 Query: 196 SPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGVDG 255 S R M L+ L A I W +A + +L V AA +AG+G+ A ++ L ++ G Sbjct: 187 SLTRFMALSALESAGISWHIACTSDSLSGVVAAARAGMGIFAHSRSLIPSGLVEITSSHG 246 Query: 256 LPPLPDTEY-LLCYDP---SSNNELAQVI 280 LP L + ++ +L +P +S EL + I Sbjct: 247 LPKLNELDFVMLSANPRYHASIGELTEAI 275 >UniRef50_C5CN69 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CN69_VARPS Length = 300 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 83/258 (32%), Positives = 123/258 (47%), Gaps = 2/258 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD LR FV+VAD + AA A+ TQSAVS Q++RLE+ +G +F R R+ LT Sbjct: 2 LDSQQLRAFVSVADHGSVTRAADAMHLTQSAVSAQIRRLEEQLGCRVFDRTTRSLQLTAQ 61 Query: 71 GIQLLGYARKILRFNDEACSSLMF-SNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LL YAR IL+ +A S L + L +G S+ L L P + Sbjct: 62 GSVLLSYARSILKLQQQAVSRLAAPRHAPATLRLGCSEGFPSEWLFGALAGFRERRPDVH 121 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 +++ + +A+ + +DLMV T + L P W +A+ +L P+PL Sbjct: 122 VEISCGISTMLAKQVRQHSLDLMVGTVCDAGSDTETLWMEPLVWAFSAKALLDPEAPVPL 181 Query: 190 VLLDDPSPFRDMVLATL-NKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L +P PFR+ LA+L W++ A + A+ AA AGL +T M LR Sbjct: 182 AFLSEPCPFREAALASLAGHGTTHWQIVLTAQSSGALVAAAAAGLAITVLTPSGMPSGLR 241 Query: 249 VLSGVDGLPPLPDTEYLL 266 + LP LP +++ Sbjct: 242 SIPPGSFLPVLPAARFVI 259 >UniRef50_A6V8U6 Probable transcriptional regulator n=6 Tax=Pseudomonas aeruginosa RepID=A6V8U6_PSEA7 Length = 294 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 74/269 (27%), Positives = 118/269 (43%), Gaps = 4/269 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 LD++LLRTF A+ F AAA+ + R+ SAVS ++RLE+L G LF R ++ LT Sbjct: 10 TLDIELLRTFHAILRFGRFLAAASHLNRSPSAVSTHVRRLEELAGGRLFERDNQSVRLTP 69 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G + ++L +D + L + G S+E A +L LL R+ + P L Sbjct: 70 LGQRFQRQTAELLETHDRVLAGLRRREEPLRVRFGISEEYAGKLLARLLPRLGAELPALE 129 Query: 130 LDVRVKRNAYMAEMLESQEVD--LMVTTHRPSAFKALNLRTSPTH--WYCAAEYILQKGE 185 L+V + +A L ++D L+V + + + T W + Sbjct: 130 LEVLTDASGRLAGRLRRGQLDLALLVQAQDETPYDGHSREIGGTQPVWVAGHGLRIDPQR 189 Query: 186 PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSP 245 P+PL L P+R +L L A WR + A+ AA++ GL + + Sbjct: 190 PLPLALHGHGCPYRQALLEALGAAGRRWRTVVSSPGAAALEAAIEGGLAIGVIDRARVGT 249 Query: 246 DLRVLSGVDGLPPLPDTEYLLCYDPSSNN 274 +RVL +G LP L + P + Sbjct: 250 TMRVLGPAEGFAELPAHRIRLAFAPGDRS 278 >UniRef50_C6WIS4 Transcriptional regulator, LysR family n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WIS4_ACTMD Length = 298 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 66/231 (28%), Positives = 112/231 (48%), Gaps = 2/231 (0%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +LDL+ LRT VA+A+ F AAA +Q A+SQ ++ LE+ + ++LF R GRN T Sbjct: 4 SLDLEHLRTLVAIAECGGFGKAAAVRHISQPALSQHVRLLERGLKRKLFERDGRNMRFTH 63 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G ++L AR+I+ +D + L + + + +G+++ SA +LP ++ + +P + Sbjct: 64 EGERVLAEARRIIEVHDASLRRLE-ARPERTIVVGSTEHSAGQVLPEMIRALREAFPDCS 122 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI-P 188 + R+ +AE + VD + P WY A + P Sbjct: 123 TRFEIGRSTQLAESVHKGAVDFAFVLDPGGQGPGHLVGRLPLVWYAARGWQPDGASGTWP 182 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARP 239 LV ++P R+ L+ L ++ ++TL V A V+AGLGV P Sbjct: 183 LVAFEEPCGLRERALSVLTGEGHQVQVTAQSTTLEGVLAGVRAGLGVALLP 233 >UniRef50_D2B3J0 Transcriptional activator n=4 Tax=Actinomycetales RepID=D2B3J0_STRRD Length = 282 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 79/266 (29%), Positives = 127/266 (47%), Gaps = 3/266 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +L+ LLR+FV + + AA A+ TQ A+SQQ+++LE+ VG L R T Sbjct: 6 DLETALLRSFVTAVRAGSISRAAVALGHTQPALSQQLRKLERAVGSPLLHRAPSGVSPTR 65 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL YA +IL + +A + L G +G ++ A + LP L ++ ++P Sbjct: 66 AGEELLPYAERILALSAQALAE-TGRALTGRCGVGLLEDLAVSRLPQALADLARLHPDAT 124 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 L+V N M E ++ V L++ + P W + + +P+P+ Sbjct: 125 LEVLSLSNGAMREAYDTGRVQLVLDEVPDLPWPPRWTVRLPLVW-AVGQGVAVDADPLPV 183 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 VL + +R VL TL A WR+A+ +++L V AA++AGLGV A + P + Sbjct: 184 VLFSNTCAWRTSVLETLEGAGRRWRVAFESNSLAGVLAALRAGLGVAALMPANLEPAM-A 242 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNE 275 LP LPD E L P + + Sbjct: 243 CHDAAALPALPDVELGLARHPGTEGD 268 >UniRef50_UPI0001905405 transcriptional regulator, LysR family protein n=2 Tax=Rhizobium etli RepID=UPI0001905405 Length = 200 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/171 (35%), Positives = 96/171 (56%), Gaps = 9/171 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++ DLLRTF+ VA+ + F+AAA + RTQSAVS Q++RLE +G+ LF R R LLT Sbjct: 5 IESDLLRTFLVVAETSNFSAAAQRIGRTQSAVSTQIKRLEAAIGENLFERGARGVLLTRQ 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 GIQL+ YAR+++ +EA +++ L G + IG +E + T+LP L + +P + + Sbjct: 65 GIQLVPYARRVIDLLNEAAATIRSKPLDGPVRIGIPEEYSQTVLPAALAAFAVRHPAVEV 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTH------RPSAFKALNLRTSPTHWYC 175 V Y L + E D +++ R A + ++R S + +C Sbjct: 125 TVSCD---YTVRNLAALERDELISPSFSTGAIRTRAKFSASIRPSGSRRWC 172 >UniRef50_A1B0X3 Transcriptional regulator, LysR family n=11 Tax=Proteobacteria RepID=A1B0X3_PARDP Length = 288 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 72/234 (30%), Positives = 115/234 (49%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD LLR FVA+ D +F AA + TQS +SQQ+ RLE G L R R L T Sbjct: 2 LDPRLLRAFVAIVDSGSFTRAAERLHMTQSTISQQLARLEDAAGHALIDRAARPVLPTPQ 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LLGYAR+IL EA ++L + + +G ++ + + + + +P++ L Sbjct: 62 GERLLGYARRILALQQEAAAALGDPSGTSSIRLGLPEDIFNPEMCGIFRDFTRQFPQIRL 121 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 DV V + + + E+D++V T W+ +A +P+PLV Sbjct: 122 DVTVGLSRELMRRYRAAELDIVVVKEPAPDSDCRAHFTEAMAWFESALLPRDWQDPVPLV 181 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMS 244 + +RD + A + + W +A+ S+LP+V V+ GLG+T PV +S Sbjct: 182 VFPPGGLYRDAMFARIERERRRWYVAFSGSSLPSVILGVEGGLGITLLPVAAVS 235 >UniRef50_Q3IFV7 Putative bacterial regulatory protein LysR Family n=3 Tax=Alteromonadales RepID=Q3IFV7_PSEHT Length = 281 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 66/253 (26%), Positives = 127/253 (50%), Gaps = 3/253 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 N+ D LRTFV V + + FA A + +Q AVS Q++RLE L+G +LF + G+ ++L + Sbjct: 3 NISTDSLRTFVMVVEASGFAKAGDLLGLSQPAVSLQIKRLEDLLGYKLFKKQGQRQVLNQ 62 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 +G LL A+++++ ND ++ G + +G E A ILP ++ ++YP+++ Sbjct: 63 YGELLLPMAKQMMQHNDAILQLFTSESITGRVRLGIPSEFAARILPSIIGDFVALYPEVS 122 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNL-RTSPTHWYCAAEYILQKGEPIP 188 L+V+ + + ++ + DL++ + + + + W + L + + + Sbjct: 123 LEVKSRLSKHLLSQERQDQFDLVLALNEQLDSEQFPIFKQDQLVW--VGDLSLAQNDTVT 180 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 LV + +R + L ++ I +R+ Y + L + AA+K GLG+T + +L Sbjct: 181 LVTAPEGCIYRRRAIEALERSGIKYRIVYSNADLTGLIAALKEGLGITVLAKSTVPNELN 240 Query: 249 VLSGVDGLPPLPD 261 LP L D Sbjct: 241 YQLKTKFLPSLGD 253 >UniRef50_B7WU46 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WU46_COMTE Length = 283 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 74/267 (27%), Positives = 134/267 (50%), Gaps = 4/267 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +L++ LRT +AV++ + AAA + +QSAVS+Q+++LE VG++L R T Sbjct: 3 SLEISQLRTLIAVSEAGSLTAAAPRLFLSQSAVSEQIRKLEDCVGQQLLLRGKAGVTPTG 62 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G+QLL +AR+I DEA L +L+G + + +D +L +L +++ ++P + Sbjct: 63 SGLQLLEHARRITAMADEALLDLRGESLRGRIRLAVTDYFKPGLLARMLKQLAHIHPGVR 122 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 ++V V R+ + + S DL + A L A+ Q+ P+PL Sbjct: 123 MEVSVLRSVEVHAAVSSGRSDLGLVMSLDGAQSQLQPMGCSEALVWASAPGWQQAGPLPL 182 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD-LR 248 ++L + + L K I + +A+ AS + +++A+ AGLGV + ++ Sbjct: 183 LVLPQSCALHQLAIRELEKRAIAYEIAHQASGVAGLQSAIAAGLGVACINASAQAEGVVQ 242 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNE 275 V +G++ LP LP + L P+ E Sbjct: 243 VPAGLN-LPGLPRVWFGLL--PAKGEE 266 >UniRef50_A9CFQ8 Transcriptional regulator, LysR family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=A9CFQ8_AGRT5 Length = 283 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 71/227 (31%), Positives = 110/227 (48%), Gaps = 3/227 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +LD + + F+ VA+L +F A + +Q+A+S +++RLE ++G L R R LT Sbjct: 6 SLDPEAVEAFLLVAELQSFTQVAGVMNTSQAAISLRLRRLEDMLGHRLVERTPRRVRLTA 65 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G + L AR + A +F L IG + LP +L VS + Sbjct: 66 AGERFLEPARAYVAAGRRALD--VFGQEPTRLAIGVTHHLIGADLPRILRVVSERVTSVT 123 Query: 130 LDVRVKRNAYMAEMLESQEVD-LMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 L +R + E+ ++ E+D ++V H L WY +A++ L+ P+P Sbjct: 124 LHLRTAGTRTLLELYDAGELDAIVVLRHDDIRRDGEPLFQESFGWYGSADFDLRSDVPVP 183 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGV 235 LVL +P R M L L ADI WR +V + AV AAV+AG+GV Sbjct: 184 LVLQPEPCNLRAMALRALESADIAWREVFVGTGATAVGAAVEAGIGV 230 >UniRef50_C2AP68 Transcriptional regulator, COG0583 n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AP68_TSUPA Length = 278 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 77/252 (30%), Positives = 122/252 (48%), Gaps = 10/252 (3%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD+ LR+ VAVA AA A+ TQS VS ++RLE+ G + + GR T+H Sbjct: 6 LDIVPLRSVVAVARCGGVHRAAQALHLTQSTVSAHLRRLERTSGAAIVEKTGRGVRFTDH 65 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LL +A+ IL +D A L S VLTI A++ AD ++P L + + Sbjct: 66 GTRLLRHAQAILEAHDAAIVELA-SPAPRVLTIAATEHGADLLIPALSAGLRDLPGGWTA 124 Query: 131 DVRVKRNAYMAEMLESQEVD---LMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 R R++ +A +E D + T P A A+ L HWY A ++ E + Sbjct: 125 QFRFDRSSQVAGAVEHGLADAAIFLAPTAHPDAVGAIAL-----HWYAARDWT-PPAEDV 178 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 P++L D+P R + L++ + +A A+ L + +A + GLG T P + L Sbjct: 179 PVLLFDEPCVLRAPAVEALHRHHVSHVVAAEAANLAGLYSATRGGLGATLLPEIDATDGL 238 Query: 248 RVLSGVDGLPPL 259 V++ + PP+ Sbjct: 239 AVVNSLPSPPPI 250 >UniRef50_UPI0001A44853 LysR, substrate-binding protein n=2 Tax=Pectobacterium carotovorum RepID=UPI0001A44853 Length = 295 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 72/262 (27%), Positives = 121/262 (46%), Gaps = 5/262 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKL-LT 68 + L+ LR FV++A+ F A + RTQS +S ++RLE+ VG L R + L LT Sbjct: 12 GITLEQLRIFVSIAECGGFGRAGEELGRTQSTLSAGLKRLEEDVGCRLIERRQGHILGLT 71 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 E G QLL AR IL A +L S + G + +G D+ L +++ P L Sbjct: 72 EEGRQLLPAARDILLRTHRAIGALQKSPMTGRVALGVPDDFEVKNLHDIISLCLEENPGL 131 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVT---THRPSAFKALN-LRTSPTHWYCAAEYILQKG 184 +++ + ++ M+ Q +D+++ +P + LR HW + + Sbjct: 132 KVEITAASSTVLSSMVAQQRLDVVILKGLAGQPLISETERILRVESLHWVSSGAVNFSEM 191 Query: 185 EPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMS 244 + +PLV D R ++ L P+ +YV+ + +R+A GLG+ +S Sbjct: 192 DEVPLVTFPDGCVIRKCAVSALEHVGRPYYFSYVSGSFDNIRSAAAKGLGIGLLSKSALS 251 Query: 245 PDLRVLSGVDGLPPLPDTEYLL 266 L VL DG P +P + +L Sbjct: 252 DALYVLGPEDGAPSVPAIQLVL 273 >UniRef50_C0Z518 Transcriptional regulator n=3 Tax=Paenibacillaceae RepID=C0Z518_BREBN Length = 295 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 75/250 (30%), Positives = 114/250 (45%), Gaps = 16/250 (6%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L TF VA +F AA + Q V+ QMQ+LEQ G LF R+GR LT+ Sbjct: 1 MELVYLHTFREVARYGSFTRAAEELGYAQPTVTAQMQKLEQSYGAPLFERYGRKLRLTQA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LL YAR+++R E+ ++ G + IG D A LP L YP++ L Sbjct: 61 GEALLPYARELIRLYGES-KEVIKHQTTGPIAIGTIDTLAAFFLPPYLQAFCQQYPQVDL 119 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSA----------FKALNLRTSPTHWYCAAEYI 180 +R A + + + +D + RP + L + P H + A + Sbjct: 120 VLRTAGEAEIVQQIRDGYLDFGIIFDRPCTDPELVTHVIREEELVVVMPPAHRFTTATAL 179 Query: 181 LQK---GEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA 237 GE PLVL ++ +R M+L +A + R+A S A++ V+ GLGV Sbjct: 180 TVHDLGGE--PLVLTEEGCTYRGMLLEAFGEAGMTQRIACQFSNPEAIKQCVRCGLGVAL 237 Query: 238 RPVEMMSPDL 247 PV + +L Sbjct: 238 LPVMAVQREL 247 >UniRef50_B4R9P2 Transcriptional regulator, LysR family n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4R9P2_PHEZH Length = 300 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 129/256 (50%), Gaps = 11/256 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 D DLLRTFV + D +FAAAA AV RT SAVS Q++RLE+ G+ L R + LT Sbjct: 2 FDQDLLRTFVTIVDAGSFAAAADAVGRTPSAVSMQIKRLEEQAGRRLLVRGAQGVRLTGD 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LL +AR+ILR ++ A ++M LT+G D T+L +L+ + + +P L Sbjct: 62 GEMLLVHAREILRAHEIAFDAMMNERSARSLTLGLPDTYVATLLTEVLDELVAGFPDTNL 121 Query: 131 DVRVKRNAYMAEMLESQEVDL-MVTTHRPSAFKALNLRTSPTH-----WYCAAEYILQKG 184 V V + + LE +DL +VT ++ + R H W CA + Sbjct: 122 RVVVDGSGALMRRLEEAALDLALVTEYQLGG----DERGELVHLERGLWACAEDCPALAL 177 Query: 185 EPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMS 244 P+P+ L+ + S FR + L P+R+A ++ +RAAV +G V P M+ Sbjct: 178 TPLPVALMFEGSVFRRLAQEMLRAVARPYRIAVTSNAETVIRAAVASGAVVAPLPESRMA 237 Query: 245 PDLRVLSGVDGLPPLP 260 LR L+ +G P P Sbjct: 238 -GLRELTPEEGFPRFP 252 >UniRef50_A6UC84 Transcriptional regulator, LysR family n=5 Tax=Alphaproteobacteria RepID=A6UC84_SINMW Length = 296 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 70/260 (26%), Positives = 125/260 (48%), Gaps = 6/260 (2%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 L++D LR A+ AA A+ +QSAVS +++RLE + +L +R + T Sbjct: 8 RLEIDALRALWAIRHHGGITRAAEALGLSQSAVSHKIKRLETSLDCDLLSRRSGGPVFTS 67 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LL YA +IL +DEA SL + L G + +G ++++ T L +L R ++P ++ Sbjct: 68 AGEDLLDYAGRILGLHDEALLSLSKTQLAGRIALGLTEDTTCTDLARILGRFRRLHPHVS 127 Query: 130 LDVRVKRNAYMAEMLESQEVD---LMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEP 186 + ++V+ + + MLE E+D + V +H + R + HW + L + P Sbjct: 128 VRIKVRMSLVLRAMLERGELDAAIVQVFSHEVRPTDVVLFREN-LHWVKHPDLCLPQNGP 186 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 IP + DD +R L + ++ + AAVK+ LGV + + Sbjct: 187 IPFLSFDDECFYRKWALDVGQDGGTILETVFECASAAGIVAAVKSALGVALLSERHLRAE 246 Query: 247 LRVLSGVDGLPPLPDTEYLL 266 +++++ D LP P Y++ Sbjct: 247 MQIVT--DRLPAPPALVYVV 264 >UniRef50_A5E9P8 Putative transcriptional regulator, LysR family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5E9P8_BRASB Length = 299 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 110/209 (52%), Gaps = 9/209 (4%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +LD + + FV A+L +F AA ++ TQ+AVS +++RLE+ +G+ L R R L+ Sbjct: 15 SLDPESVEAFVLTAELRSFTLAAQSLNTTQAAVSLRIKRLEERLGQRLLDRTPRKVSLSR 74 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G + L AR+++ A ++L ++ LT+G + LP L RV P L Sbjct: 75 EGERFLDPARELVNAYKRALAALSPRTIR--LTLGITHHLVGPGLPVALERVGGNDPNLV 132 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVT----THRPSAFKALNLRTSPTHWYCAAEYILQKGE 185 LD+R+ + E+L+S +VD + +R S + N R S W+ + + + + E Sbjct: 133 LDLRIGDTRGLLELLDSGKVDAAIILRHGENRRSGERLFNERFS---WFGSPDLKVGRSE 189 Query: 186 PIPLVLLDDPSPFRDMVLATLNKADIPWR 214 P+P+ + +P R++ + L +ADI WR Sbjct: 190 PLPIAIQPEPCQVRELTVRALTRADIRWR 218 >UniRef50_B7KYH3 Transcriptional regulator, LysR family n=4 Tax=Rhizobiales RepID=B7KYH3_METC4 Length = 282 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 10/266 (3%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDL +R F+ + AA A Q VS +++ LE +G++L R R TE Sbjct: 2 LDLASVRLFILAVEFGNLTRAAEAAGTVQPVVSTRLKALEAALGRKLLERTPRFVRPTED 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYP-KLA 129 G+ L AR ++ +D+A ++ IGASD + T L ++ V + P + A Sbjct: 62 GLAFLAKARALMAAHDKAACFDDEPTMR--FAIGASDHALGTGLEHVIRHVRAALPSRSA 119 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 L++R + + + E+D ++ L T P W + + P+PL Sbjct: 120 LELRSGTSQQVRASFDDGELDAVIIRREAGGADGEVLGTDPLGWRSMEDNVTAPDLPVPL 179 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 V L P R + + L+ A PWR A+V + A+ AAV+AGLG+ P+ ++ Sbjct: 180 VTLGPPCGVRAVAIRRLDAAKTPWREAFVGGSCSALLAAVRAGLGIA--PMGAVASGR-- 235 Query: 250 LSGVD---GLPPLPDTEYLLCYDPSS 272 +S V GLP LP +E ++ SS Sbjct: 236 MSDVGPRFGLPDLPPSEIVMFARTSS 261 >UniRef50_Q130S5 Transcriptional regulator, LysR family n=1 Tax=Rhodopseudomonas palustris BisB5 RepID=Q130S5_RHOPS Length = 319 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 76/258 (29%), Positives = 125/258 (48%), Gaps = 7/258 (2%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR-HGRNKLLT 68 + L+ LR FV+VA+ F A + R+QSA++Q ++RLE+++ L R G LT Sbjct: 13 RITLEHLRAFVSVAEGGGFQQAGLELHRSQSAITQSLKRLEEIIECRLVERCQGHIVGLT 72 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G + L A +IL +EA S+++ + G +T+G D+ L ++R +++ L Sbjct: 73 SDGRRFLPSAVEILARTNEAVSAMVQPQISGRITLGVPDDFRIMDLHGAISRCAALNRGL 132 Query: 129 ALDVRVKRNAYMAEMLESQEVDL----MVTTHRPS--AFKALNLRTSPTHWYCAAEYILQ 182 ++ ++ + ++ ++DL + RP+ +L LRT P W A Sbjct: 133 RIETVSALSSTLVSGVQKGDLDLAIFKQIDGQRPATAGRSSLLLRTEPLMWVANARSRFD 192 Query: 183 KGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEM 242 +PLV+ +R+ L L P AYV+++ VRAA+ AGLGV P Sbjct: 193 SIAELPLVVFPPGCCYREAALVALAAKAKPSYPAYVSASYENVRAAISAGLGVGILPDSA 252 Query: 243 MSPDLRVLSGVDGLPPLP 260 + D VL DG P LP Sbjct: 253 VGADHIVLREADGFPRLP 270 >UniRef50_C1DEY3 Bacterial regulatory protein, LysR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DEY3_AZOVD Length = 311 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 69/282 (24%), Positives = 138/282 (48%), Gaps = 6/282 (2%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD++ + F+ V +LN+F AA A+C TQ+ V+ ++Q+LE+++G LF R R L+ Sbjct: 5 LDVNSVEAFIKVEELNSFTLAAEALCLTQAGVTLKIQKLERMLGFLLFHRTPRRIYLSAE 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L A+ +L +D A L L+ +++G SD D + R+ +P L L Sbjct: 65 GELFLPRAKALLAAHDSALMPLDNFMLKREVSLGVSDFIVDVHFVEAIARIRKKHPDLIL 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 ++V ++ + E + +DL + T + L WY A+ I + +PLV Sbjct: 125 KLQVDASSIIFNEYEKKNLDLAILTQDCDKKYSCFLWKEAYGWYGKAD-IKYNRDLVPLV 183 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMM----SPD 246 L + R + + I W +++ +++ A++ GLG++ P ++ + + Sbjct: 184 TLRESCRLRKTAIDSFKINTINWYDSFIGNSITENLNAIQYGLGISPMPHRIIKSTDNHE 243 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYH 288 L +S LP LP ++ + ++ + +++++ ES++ Sbjct: 244 LVEVSKKLNLPALPSANVVM-QNNKFDSYVREIMHELTESFN 284 >UniRef50_A3JF22 Putative LysR-family transcriptional regulator n=1 Tax=Marinobacter sp. ELB17 RepID=A3JF22_9ALTE Length = 294 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 72/254 (28%), Positives = 125/254 (49%), Gaps = 25/254 (9%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +++ L TF ++ L +F AAA + +Q A+S ++ LE +G ELF R GRN +LT Sbjct: 1 MNIKALETFFWISKLGSFRAAAKKLYASQPAISARISGLEDELGIELFDRSGRNVVLTSK 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSN-LQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G Q L Y KIL+ + E ++ S+ ++G + +GA++ A T LP L+ R++ YP + Sbjct: 61 GRQALFYTEKILQLHAELLEAVASSDTIKGSIRLGAAETIAYTWLPELIERINETYPAIN 120 Query: 130 LDVRVKRNAYMAEMLESQEVDL--MVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 L++ + + +AE L +E+D+ ++ + F P W + + L P Sbjct: 121 LELDIDISVNLAEKLIKREIDIAFLIGEVKQEGFFCTPFYNYPLIWVVSPKLTLP---PE 177 Query: 188 PLVLLD-------------DPS-PFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGL 233 P+ L D +P R +V N A I + +S+L + G+ Sbjct: 178 PVSLFDLAKLPIITYPRMSEPHVNIRALVNEMSNSAQI-----HSSSSLSTIIRMALDGI 232 Query: 234 GVTARPVEMMSPDL 247 GV+A P E++ +L Sbjct: 233 GVSALPKEIIKREL 246 >UniRef50_A1UYL4 Transcriptional regulator, LysR family n=34 Tax=Burkholderia RepID=A1UYL4_BURMS Length = 305 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 73/208 (35%), Positives = 105/208 (50%), Gaps = 6/208 (2%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDLD +R FV VA+L +F AA A+ TQSAVS +++RLE +GK L R R L Sbjct: 18 LDLDAVRAFVLVAELASFTRAADALGTTQSAVSLKLKRLEAQLGKPLLERTPRRVTLAAV 77 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L AR++L ++ A ++L S+ Q L IG S+ A LP +L ++ P LAL Sbjct: 78 GAAFLPAARELLDAHERALAAL--SSAQRRLVIGVSEHVAVPDLPAVLTGLNRHDPGLAL 135 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSA----FKALNLRTSPTHWYCAAEYILQKGEP 186 ++ V +A + + + +D H P A L T P W A + + EP Sbjct: 136 EMHVGMSAGLLAQYDERRLDAAFVRHEPGEDPPRDDATLLFTEPLAWLAAPGWTPRADEP 195 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWR 214 +PL +L P R L L +A + WR Sbjct: 196 LPLAVLAGPCGVRAAALRALERAGVRWR 223 >UniRef50_B8CHE2 Regulatory protein, LysR:LysR, substrate-binding n=11 Tax=Shewanella RepID=B8CHE2_SHEPW Length = 299 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 73/270 (27%), Positives = 126/270 (46%), Gaps = 7/270 (2%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 L ++LL +F+AV + + AA +CRTQS +S Q+++LE+ VG+ L R + LTE Sbjct: 2 LKIELLESFIAVVECGNLSKAADKLCRTQSTISLQIKKLEESVGQPLLLRDNKGVSLTES 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYP--KL 128 G LL YA K+++ + +A L + V+ +G + L L + +L Sbjct: 62 GKTLLNYAYKMMQLSSQALDELKECQNREVIRLGVPTDYITRYLGSCLLEFIREFTCIEL 121 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTH--RPSAFKALNLRTSPTHWYCAAEYILQKGEP 186 +D V N Y + L + E D++V TH P+A L HW A K E Sbjct: 122 VIDTDVSGNLY--KRLHNGEFDVIVATHWQAPAAGHGELLFERRFHWVAAKGGTAHKRET 179 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +P+ L + P R V A + P + + A+ AV+ + ++ ++ + Sbjct: 180 VPVALYPENCPIRAQVFANHQISMRPMSVLLSTPSPAAMCLAVENDIVISPIAEFRINDN 239 Query: 247 LRVLSGVD-GLPPLPDTEYLLCYDPSSNNE 275 +++L V+ +PPLP L +P + + Sbjct: 240 MQILDPVEHNIPPLPVFNESLYLNPETQTD 269 >UniRef50_Q01Z84 Transcriptional regulator, LysR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01Z84_SOLUE Length = 297 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 71/247 (28%), Positives = 123/247 (49%), Gaps = 13/247 (5%) Query: 5 NRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRN 64 +R N++L L+ F AVA +F+ AA + RTQ AVS +QRLEQ +G++L R G++ Sbjct: 3 SRLAFNMELHSLQVFHAVATEKSFSRAAEKLLRTQPAVSLALQRLEQELGEKLIDRSGKD 62 Query: 65 KLLTEHGIQLLGYARKILRFNDEACSSL--MFSNLQGVLTIGASDESADTILPFLLNRVS 122 +LT+ G +L YAR+ E +S+ + N G LTIGA +ES L + + Sbjct: 63 LILTDAGRTVLDYARRFQSLQLEMENSIAELRDNSAGKLTIGA-NESTTLYLLKHIEKYR 121 Query: 123 SVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPS--AFKALNLRTSPTHWYCAAEYI 180 +YPK+ + VR ++ + L ++L V ++ P+ K+ + T + + ++ Sbjct: 122 ELYPKVKVQVRRSLSSMLPNELLDGNLELGVISYDPADERIKSKVIFTDALAFVVSPKHR 181 Query: 181 LQKGEPIPLVLLDDP--------SPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAG 232 L + +P+ L SP+R +V+ +P + T+ +R V++ Sbjct: 182 LANRKTVPITELGSENFIAHNVLSPYRAVVIREFQTHKVPLHMDVEMPTIETIRKLVQSN 241 Query: 233 LGVTARP 239 LGV P Sbjct: 242 LGVAFLP 248 >UniRef50_A5FXI2 Transcriptional regulator, LysR family n=22 Tax=Bacteria RepID=A5FXI2_ACICJ Length = 304 Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 80/252 (31%), Positives = 127/252 (50%) Query: 15 LLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQL 74 LLR+F+AV + +F AA + QS VSQ + RLE L G+ L AR T G L Sbjct: 20 LLRSFIAVVEARSFTRAARHLGLRQSTVSQHVARLEALAGRRLIARDTHRVSPTPDGDAL 79 Query: 75 LGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVRV 134 L +AR++L + S L+G + IGAS++ + LP +L + +P++ L++ V Sbjct: 80 LDFARRLLEAEARIDAYFAASALRGRIRIGASEDFVFSALPEVLADFAGRHPEVDLELTV 139 Query: 135 KRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLVLLDD 194 + + ++ E+DL+ R + W G+P+PLVL Sbjct: 140 GLSQTLYAGFDAGELDLIFAKRRAGDRRGRVAWAEELVWIARPGKRPVAGQPVPLVLYPP 199 Query: 195 PSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGVD 254 PS R+ L +++A +PWR+A + +L +RAA AGLG A ++ P L + Sbjct: 200 PSVTRERALEAMDRAHLPWRIACSSGSLSGLRAAALAGLGFAAHAARLIPPGLAPVPPDA 259 Query: 255 GLPPLPDTEYLL 266 GLPPL TE+++ Sbjct: 260 GLPPLGLTEFVV 271 >UniRef50_A6VRE8 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VRE8_MARMS Length = 288 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 69/255 (27%), Positives = 117/255 (45%), Gaps = 2/255 (0%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 ++ LD+D +R FVA+ADL +F AA + TQ+A+S +++RLE+ V + L R R L Sbjct: 1 MLTLDVDSVRAFVAIADLKSFTQAANLLGTTQAALSLRLKRLEERVKRRLIERTPRQVRL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 + +G + AR L ++ A SL+ + + L IG ++ L +L +V+ P Sbjct: 61 SSYGELFIASARDFLEAHERAVESLLLAKKRLKLGIGCHLIGSE--LQSMLAKVNEFAPD 118 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 L L++ + + E + E+D ++ + L WY + + EP+ Sbjct: 119 LVLEISTDTSFQVKEAYLNGELDAVILRSEDERKEGFILCIEHYSWYASPSFQYSPNEPL 178 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 L LD+ RD L +A + VA + AA+ AG+ V M D Sbjct: 179 KLATLDEKCGVRDQAPMLLKRAGLKSHNVLVAGNTDVINAAISAGMAVGVFSQRMAPKDS 238 Query: 248 RVLSGVDGLPPLPDT 262 + + LP LP + Sbjct: 239 IDVGELFNLPTLPTS 253 >UniRef50_C1F703 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F703_ACIC5 Length = 306 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 72/250 (28%), Positives = 123/250 (49%), Gaps = 13/250 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +DL L TF+AV + F+ AA + RTQ AVSQ +++LE+ +G++LF R R LT Sbjct: 1 MDLWQLETFLAVVEERGFSRAATRLHRTQPAVSQTIRKLEEELGEQLFERTSREGTLTSA 60 Query: 71 GIQLLGYARKILRFNDEACSSL--MFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L YA ++LR EA ++ + S +G L I A++ + +LP +L+ V P++ Sbjct: 61 GELLRSYAERLLRLRAEAQIAIEELQSLERGRLVIAANEYTCLYLLP-VLDEFRRVCPQI 119 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRP--SAFKALNLRTSPTHWYCAAEYILQKGEP 186 + V+ + + E L + V+ + T RP + F+A + + + + E+ L + Sbjct: 120 GVTVQRSLASRIPEHLLERSVEFGIITFRPDRAQFQATAVYSDGAAFVMSPEHPLARLSE 179 Query: 187 IPL--------VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 +P+ V + SP R ++ P + +L AV+ V G GV Sbjct: 180 VPIRELGAENFVAHNVASPLRQRIIEVFAVHQTPLNIGVELPSLEAVKRYVGLGNGVALV 239 Query: 239 PVEMMSPDLR 248 P + P+LR Sbjct: 240 PTLTVEPELR 249 >UniRef50_D2C3C2 Transcriptional regulator, LysR family n=1 Tax=Dickeya dadantii Ech586 RepID=D2C3C2_DICD5 Length = 283 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 64/253 (25%), Positives = 125/253 (49%), Gaps = 6/253 (2%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +L++ LRTF+ V + AA +CR+QSA+S +++LE ++ LF+R + LT Sbjct: 5 DLEIQWLRTFLTVVKKGSMTVAAEQLCRSQSAISMHIRKLEDVLAVRLFSRDSKKLSLTT 64 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL YA K+L + + S++ S L G ++ G D+ A L +L S YP + Sbjct: 65 AGYELLSYAEKLLLLHSQTKSAIRRSELCGKVSFGIPDDYASAYLSEILTFFSQHYPAVE 124 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHW--YCAAEYILQKGEPI 187 L++ + ++ + +++ +D+ + T R + L P W Y + I P+ Sbjct: 125 LNLLCEPSSLLLPKIDAGTLDVAIIT-RDVPDRGHFLSHEPLVWVGYFPEDAI--DDAPL 181 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 P+ + + S R ++++L + R+ Y + + A K+GL + + + Sbjct: 182 PVAMYEFGSEARKKIISSLEQVTQGCRIMYNSPYIAGQIAVAKSGLALAILTQCSVPEGM 241 Query: 248 RVLSGVDGLPPLP 260 ++++ + LP LP Sbjct: 242 KIINS-EKLPKLP 253 >UniRef50_A0LNI4 Transcriptional regulator, LysR family n=4 Tax=Deltaproteobacteria RepID=A0LNI4_SYNFM Length = 302 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 76/253 (30%), Positives = 115/253 (45%), Gaps = 15/253 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D+ L F V ++ +F AA AVC TQ VS+ ++ LE+ +G++L R GR L T Sbjct: 1 MDIHRLVVFCRVLEMGSFTKAAEAVCLTQPTVSEHVRALEETLGEKLIDRLGREVLPTPA 60 Query: 71 GIQLLGYARKILRFNDEACSSL--MFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L YAR I++ DEA +L NL G L IGAS +LP L+ YP + Sbjct: 61 GKILYQYARDIIQLRDEAVQALEKFKGNLSGALLIGASTIPGTYVLPELIGSFKKSYPAI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHR--------PSAFK-ALNLRTSPTH-WYCAAE 178 + +R+ +A + V+ V R AF L L H W Sbjct: 121 QITLRITDSAEVVARTIDGGVEFGVIGARLEDRRIVLEEAFSDELVLAVFRDHPWAVRKS 180 Query: 179 YILQKGEPIPLVLLDDPSPFRDMVLATLNKADI-PWRLAYVA--STLPAVRAAVKAGLGV 235 L++ P +L + S R ++ L P +L VA + A+R +KAG+G+ Sbjct: 181 VSLEELAGEPFILRERGSGTRIVMNQALEAHGFSPTKLNIVAEMGSTEAIRQGIKAGIGI 240 Query: 236 TARPVEMMSPDLR 248 + ++ DLR Sbjct: 241 SILSHRAVAEDLR 253 >UniRef50_A0QZC3 Transcriptional regulator, LysR family protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QZC3_MYCS2 Length = 272 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 70/251 (27%), Positives = 122/251 (48%), Gaps = 10/251 (3%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + LD+ +LRTFVAV AA A+ + +AVS ++RLE+ +G L GR L Sbjct: 2 MTTLDITVLRTFVAVTAFGGVRRAAQALHLSPAAVSSHVRRLERELGCRLVTAQGRGIGL 61 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G +L AR IL+ +D+ +L L + AS+ +A++++P +++ +S YP Sbjct: 62 TIDGEELASRARMILQEHDDTVYALQRPR-DDQLVVAASEHAAESLVPTVVSTLSEAYPD 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + +R+ R+ + ++ + D+ + R S + + P W+ + Sbjct: 121 HEITLRLNRSERVRQLADDARADVGIMLTR-SGHAGVKVAALPLQWFGT-----ETARRD 174 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD- 246 +VL P RD A+L +P+R+ A L + AV+ G GVT P P+ Sbjct: 175 RIVLFARPCAIRDPATASLT--GLPYRIVKEAVDLTCLLTAVRQGYGVTPLPRTGPLPEG 232 Query: 247 LRVLSGVDGLP 257 LR ++ + G+P Sbjct: 233 LRHITDLPGIP 243 >UniRef50_A9KNS0 Transcriptional regulator, LysR family n=2 Tax=Clostridium RepID=A9KNS0_CLOPH Length = 294 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 63/242 (26%), Positives = 118/242 (48%), Gaps = 12/242 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D+ L+ FV VA L+ F AA + QS+++ Q+Q LE+ +G +LF R G+ LT Sbjct: 1 MDIRLIIAFVTVATLHNFTKAADQLGYAQSSITSQIQLLEKELGVKLFDRLGKKVCLTPE 60 Query: 71 GIQLLGYARKILRFNDEACSSL-MFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G Q L AR++L ++A SL + + G+LTIG ++ LP LL+ YP++ Sbjct: 61 GEQFLVDARQLLFSWEKAKGSLSLLKSPHGILTIGVNESVCSVKLPKLLDEYRKRYPEVE 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAF----------KALNLRTSPTHWYCAAEY 179 +++ + + L+ +D+ V +P ++L L SP H Sbjct: 121 FHIKIGSSDELELWLKENLIDVAVLLDKPWHVPELTVKIYQEESLGLFVSPNHPLDGVGN 180 Query: 180 IL-QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 IL P++L+ S ++++ A + +A+ +R+ +++ ++ G G+ Sbjct: 181 ILPHDVSSHPMLLISHSSCWKNIFQAVMEEANESFRIMLETASISDLKQFAVLGFGIAVL 240 Query: 239 PV 240 P+ Sbjct: 241 PL 242 >UniRef50_UPI000178A79D transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A79D Length = 291 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 63/240 (26%), Positives = 117/240 (48%), Gaps = 12/240 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L+TF VA +F AA + QS+V+ Q+Q+LE+ G +LF R+GR LT+ Sbjct: 1 MELIYLQTFREVAVRKSFTKAADELGYAQSSVTTQIQKLEKEYGVKLFERYGRGLRLTKS 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +L YA ++L ++ L G+L+IG D A LP +L+R+ + LA+ Sbjct: 61 GEELFKYAVQMLDLFQQSKEKLTKQG-GGILSIGTIDSLAAYFLPSVLHRLRQEHEDLAI 119 Query: 131 DVRVKRNAYMAEMLESQEVDL-MVTTHRP--SAFKALNLRTSPTHWYCAAEYILQKGEPI 187 ++ R + + E DL ++ ++P ++ +++R P H ++ L + I Sbjct: 120 RLQTDREDSIVSKVREGEYDLGLILENKPEDTSLNWISIREEPLHLIAHPDHPLHRLPVI 179 Query: 188 PL--------VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARP 239 L ++ +D +R M+ L + P R+ A++ + +G G++ P Sbjct: 180 ELEHLADYEWIMTEDTCNYRIMLEKVLRASGAPVRIGLELGNPEAIKRYIMSGTGISLLP 239 >UniRef50_Q7P1J5 Probable transcriptional activator n=1 Tax=Chromobacterium violaceum RepID=Q7P1J5_CHRVO Length = 287 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 78/264 (29%), Positives = 126/264 (47%), Gaps = 16/264 (6%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 ++D LLR AVA + AAA + +Q A+S Q+++LE+ G+ L R R LT Sbjct: 4 DIDTGLLRALAAVARHGSINRAAAELGHSQPALSLQLRKLERHCGQTLLQRSTRGVTLTP 63 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LL YA +I+ ++ + + +G ++ LP +L ++ P L Sbjct: 64 AGQALLPYAERIVCLAEQMLPGAPAAAARSC-RVGLIEDVVSRHLPRVLADFAAARPGLK 122 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWY--CAAEYILQKG--- 184 L+ RV ++ E+DL++ R L +P W CA ++ G Sbjct: 123 LEARVAPGRELSAAYRRGELDLLIANPR-----LCGLEQAPA-WSMECALPWLAAGGVCP 176 Query: 185 --EPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEM 242 + +PLVL P +RD +L L A R+ + +S+L AV+AA++AGLGV A ++ Sbjct: 177 DEDELPLVLFAAPCSWRDAMLQALQLAGRRHRVVFESSSLLAVQAALEAGLGVGALLPDV 236 Query: 243 MSPDLRVL--SGVDGLPPLPDTEY 264 + LR L + LPP+P Y Sbjct: 237 ANDALRPLPPGCLPALPPVPLALY 260 >UniRef50_C6Q178 Transcriptional regulator, LysR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q178_9CLOT Length = 303 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 80/298 (26%), Positives = 136/298 (45%), Gaps = 34/298 (11%) Query: 16 LRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQLL 75 L+TF+ VA L F AAA + +QS VS ++ LEQ + +LF R GR L E G +L+ Sbjct: 6 LQTFLVVARLLNFRAAAEELNYSQSTVSDHIRNLEQELDVKLFERFGRKVFLNEQGEKLI 65 Query: 76 GYARKILRFNDEACSSLMFSN---LQGVLTIGASDESADTILPFLLNRVSSVYPKLALDV 132 A+K+++ +E +F N ++G L IG+++ LP LL S +YP + + + Sbjct: 66 SPAKKMIKDAEEIHK--LFDNDEKIKGTLKIGSAETLCVFWLPPLLKEYSKIYPDVQIIL 123 Query: 133 RVKRNAYMAEMLESQEVDLMVTTHRPSAFKALN----------LRTSPTHWYCAAEYILQ 182 ++ + EMLE +D + H SA + L+ +P H + + I Sbjct: 124 KMADCLELPEMLEKNIIDAAFSLHDESAQQQLSQIDLFQDSTIFVAAPNHPLTSVKKITA 183 Query: 183 -KGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVE 241 + E +L + + + L +I S+L A++ VK GLG+T P Sbjct: 184 YELENQAFILTESKRGYSFELKKLLENLNIKTNTIMELSSLEAIKQCVKNGLGITLLPRI 243 Query: 242 MMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYH-NPWQYSPMSA 298 ++ +L+ +G + P+ E+ Q++ QA YH W P+ A Sbjct: 244 VVDKELQ--NGELVILPV---------------EINQILIQAKMIYHREKWMSPPLLA 284 >UniRef50_A6F6T8 Probable transcription regulator protein n=1 Tax=Moritella sp. PE36 RepID=A6F6T8_9GAMM Length = 173 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 94/170 (55%), Gaps = 1/170 (0%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 + +D L++FVA+ D + + A +V R+QSAVS Q+++LE G +L R R+ LT Sbjct: 5 DFQIDWLKSFVAIVDTGSLSNATMSVHRSQSAVSMQLKKLENAAGCKLLVRGSRHSELTS 64 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G + LGYAR+IL + EA ++ L G + +G D+ A L +L + + + Sbjct: 65 EGQKFLGYARRILDLHSEAQAAFHGEELVGQVKLGVPDDYAAKYLTPVLKNFAPRFGGVE 124 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEY 179 +++ +++ + +ES ++DL++ + R +A + L P W A+++ Sbjct: 125 IELYCEQSTSLIPRIESNDLDLVLVS-RDNANRGTLLFHEPMVWVGASQF 173 >UniRef50_A8LUJ1 Transcriptional regulator, LysR family n=3 Tax=Rhodobacteraceae RepID=A8LUJ1_DINSH Length = 303 Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 72/239 (30%), Positives = 113/239 (47%), Gaps = 13/239 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +DL L+T VAVAD +FAAAA V T SA+SQQ+Q LE +G +LF R R + L Sbjct: 1 MDLRQLQTLVAVADTGSFAAAAGVVNLTPSAISQQIQSLEAEIGAQLFDRKKRPRQLNAQ 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +L+ AR +++ EA ++ GVL +GA + ++P L + YP L Sbjct: 61 GEELVRAARSVVQTLTEARMTIAGGRTAGVLKLGAIRTVSMRLVPEALRGMRGRYPDLGF 120 Query: 131 DVRVKRNAYMAEMLESQEVD-LMVTTH---------RPSAFKALNLRTSPTHWYCAAEYI 180 ++ V + + + + +D +V H P + L + P + + + Sbjct: 121 EMTVGMSERLMADVAAGRLDAALVAEHVGVPATLSWSPVLNEPLVIIAPPQEAWRSEVSL 180 Query: 181 LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARP 239 L+ +P + P + L+ I R VA+T+PAV V+AGLGV P Sbjct: 181 LRD---LPFIRYATDVPLARQIETELSGLSIVPREVAVANTMPAVVGLVQAGLGVAVVP 236 >UniRef50_P73123 Probable RuBisCO transcriptional regulator n=81 Tax=cellular organisms RepID=RBCR_SYNY3 Length = 345 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 74/245 (30%), Positives = 114/245 (46%), Gaps = 20/245 (8%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 I LD LR A+A +F AA + +Q AVS Q+Q LE+ + LF R GR LT Sbjct: 4 IPFTLDQLRILKAIASEGSFKRAADTLYVSQPAVSLQVQNLEKQLSVPLFDRGGRKAQLT 63 Query: 69 EHGIQLLGYARKILRFNDEACSSLM-FSNLQ-GVLTIGASDESADTILPFLLNRVSSVYP 126 E G LL Y KI+ E C ++ NLQ G L +GAS + +LP ++ YP Sbjct: 64 EAGHLLLNYGEKIITLCQETCRAIEDLQNLQGGTLIVGASQTTGTYLLPRMIGMFRQQYP 123 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLMVT------------THRPSAFKALNLRTSPTHWY 174 + + ++V A + + +VDL + T P A L L H Sbjct: 124 DVTVQLQVHSTRRTAWGVANGQVDLAIIGGEVPAELQETLTVLPYAEDELALILPVLHPL 183 Query: 175 CAAEYILQKGE--PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVA---STLPAVRAAV 229 AE I QK + + + LD S R ++ L++ +I + + +++ A++ AV Sbjct: 184 AQAETI-QKEDLYKLKFISLDSQSTIRKVIDKVLSQGEIDTKRLKIEMELNSIEAIKNAV 242 Query: 230 KAGLG 234 ++GLG Sbjct: 243 QSGLG 247 >UniRef50_Q8Y2W8 Probable transcription regulator protein n=1 Tax=Ralstonia solanacearum RepID=Q8Y2W8_RALSO Length = 288 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/141 (34%), Positives = 83/141 (58%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 LDL+ L F +VADL + AA + R QS V+ +++ LE+ +G +LF RHG L+ Sbjct: 3 KLDLESLLFFKSVADLGSITQAARQLNRVQSNVTTRVKNLEERLGVKLFLRHGNRLTLSA 62 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +L GYA ++LR + EA S+++ QG L +G + +A LP +L++ YP + Sbjct: 63 DGERLRGYAERLLRLSAEAESAMLVRAPQGTLKLGTLESTAAARLPPVLSQFHRRYPDVL 122 Query: 130 LDVRVKRNAYMAEMLESQEVD 150 +++ +A + +M++ EVD Sbjct: 123 IELVTGSSAKLLDMVQRYEVD 143 >UniRef50_A6LQS5 Transcriptional regulator, LysR family n=5 Tax=Clostridium RepID=A6LQS5_CLOB8 Length = 324 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 62/241 (25%), Positives = 114/241 (47%), Gaps = 12/241 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D L F+ ++ L +F AA + QS+++ Q++ LE +G +LF R G+N LT Sbjct: 27 MDFKQLNAFLTISKLQSFTKAADNLGYAQSSITTQIKLLESELGVKLFERIGKNITLTHE 86 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNL-QGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL YA++IL+ + ++++ +++ G LTIGA++ LP +L +YP++ Sbjct: 87 GKKLLPYAKQILKLSSAVKNAVLNTDVPSGTLTIGAAESLCVLRLPEILKEYKKLYPEVD 146 Query: 130 LDVRVKRNAYMAEMLESQEVD----LMVTTHRPSAFKALN------LRTSPTHWYCAAEY 179 + ++ A L +D L V + + L P H + Sbjct: 147 ISLKFGNCAEFKYFLNDNIIDVAFSLGVKINSAEFISEIEIPEPMLLLAYPGHPLINKKE 206 Query: 180 ILQKG-EPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + K E PL+L + +R + LN +I +A ++ A++ +GLG+T Sbjct: 207 VFPKDIESEPLILTEMGCSYRATLENILNSCNIKPNVAIETGSVQAIKQFTMSGLGITLL 266 Query: 239 P 239 P Sbjct: 267 P 267 >UniRef50_B5JAQ2 LysR substrate binding domain protein n=1 Tax=Octadecabacter antarcticus 307 RepID=B5JAQ2_9RHOB Length = 304 Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 69/240 (28%), Positives = 115/240 (47%), Gaps = 9/240 (3%) Query: 8 IINLD----LDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGR 63 IIN+D D +RTF+ VA L F AA + +Q A+S ++ LEQ + +LF R Sbjct: 6 IINIDTPMTFDQIRTFLWVARLGGFRKAAQRLHLSQPAISTRISNLEQELRVQLFERGPG 65 Query: 64 NKLLTEHGIQLLGYARKILRFNDEACSSLMF-SNLQGVLTIGASDESADTILPFLLNRVS 122 +LT+HG LL YA ++L +E + S +G+ +GA++ A LP + S Sbjct: 66 ELILTKHGTLLLSYAEQMLFVEEEIKQRVANPSEAEGLFRVGAAETIAQAWLPEFMTAFS 125 Query: 123 SVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALN--LRTSPTHWYCAAEYI 180 YP++ +D+ V + + L + +DL S F N L HWY +A Sbjct: 126 EQYPRVNMDLTVDISMNLRAALLERRLDLAFLMGPVSEFTVENVELPAFDLHWYRSATNP 185 Query: 181 LQKGEPIPLVLLDDPS-PFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARP 239 IP++ + P+R++ ++ L++ P Y +++L A + AG+ V P Sbjct: 186 QTDLTAIPIISYSSKTRPYREL-MSELSRRVGPQLRVYASASLSASLKMIAAGIAVGPYP 244 >UniRef50_D1REM2 Putative LysR family transcriptional regulator n=1 Tax=Legionella longbeachae D-4968 RepID=D1REM2_LEGLO Length = 297 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 124/256 (48%), Gaps = 17/256 (6%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D+ +++F+AV + +F AA V TQSA+S+++Q++E +G LF G LTE Sbjct: 1 MDIVEIKSFLAVIEFRSFTLAAKRVHITQSAMSKRIQKMENELGVRLFIVEGSKITLTEA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSN----LQGVLTIGASDESADTILPFLLNRVSSVYP 126 + YAR++L + A S F + LQ + +GA+ + ILP L+ ++++ Sbjct: 61 ASHFVPYARQMLAAYNSAIKS--FKDDAQMLQHHIVVGATVFVSHYILPSFLSYLNTIDS 118 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLMVTTHR--PSAFKALNLRTSPTHWYCAAEYILQKG 184 L + +R + + L VDL+++ R PS A L ++ ++ L + Sbjct: 119 SLIIHIRTMAEHDIEDYLNRGTVDLVISPERDLPSKIIATQLWQEKYYYVANKKHELSQI 178 Query: 185 EPI---------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGV 235 + P + RD V N+ ++ ++ STL A+++ V+ LG Sbjct: 179 NRVLSLADFVNYPSIFTQKSGVIRDKVENAFNEKELNLNVSLEISTLDAIKSLVEFNLGW 238 Query: 236 TARPVEMMSPDLRVLS 251 + P +++S L++L+ Sbjct: 239 SVLPSKLISNQLKILN 254 >UniRef50_UPI000190E923 NADH dehydrogenase operon transcriptional regulator n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. E98-0664 RepID=UPI000190E923 Length = 60 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 38/60 (63%), Positives = 44/60 (73%) Query: 253 VDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPEGDDSLLIERDIE 312 DGLPPL DTEY+LC DP+S NELA VI+ AMESY NPW Y+ SA GDD L++E E Sbjct: 1 ADGLPPLLDTEYMLCRDPNSQNELAMVIFHAMESYQNPWHYNQFSAEGGDDPLMVEGGFE 60 >UniRef50_D0J686 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J686_COMTE Length = 292 Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 78/141 (55%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +DL+ L F +V D + AA + R QS V+ +++ LE+ +G +LF RHG L+ Sbjct: 3 KIDLESLAFFKSVVDTGSVTQAARQMNRVQSNVTTRIRNLEERLGVQLFLRHGNRLKLST 62 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G L GYA +ILR + EA S+++ QG L +G + +A LP L+R YP + Sbjct: 63 EGEVLRGYAERILRLSSEAESAMLLRAPQGTLRLGTLESTAAARLPPFLSRFHERYPDVL 122 Query: 130 LDVRVKRNAYMAEMLESQEVD 150 +++ + + +M++ EVD Sbjct: 123 IELVTGSTSRLLDMVQRYEVD 143 >UniRef50_UPI00016C47B2 transcriptional regulator, LysR family protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C47B2 Length = 291 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 74/242 (30%), Positives = 113/242 (46%), Gaps = 13/242 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLE---QLVGKELFARHGRNKLL 67 ++L LR FVAVA+ +F AA TQ +S+Q+ RLE VG+ LF R GR +L Sbjct: 1 MELHQLRYFVAVAETGSFTRAAEREDVTQPTLSEQIMRLESKPHGVGRRLFDRLGRKVVL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T+ G +LLG+A+ IL EA ++ S G L +GA A +LP + R +P Sbjct: 61 TDAGRELLGHAQGILAAVKEAERAVRDSAEGGSLRVGAIPTIAPFLLPGTVTRFRKDHPN 120 Query: 128 LALDVRVK-RNAYMAEMLESQ-EVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGE 185 + L ++ +A++L + +V LM R L P A++ L Sbjct: 121 VQLQLKEDLTERLLADLLAGELDVALMAMPVRDDRLHVEKLFAEPLVMALPAKHELASKT 180 Query: 186 PI--------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA 237 + P +LLDD F D VL+ ++ + R+ + + A V AG GV+ Sbjct: 181 EVKLADVLEEPFILLDDMHCFGDQVLSLCHRGGLEPRVVCRGEQIVTLLAMVAAGQGVSI 240 Query: 238 RP 239 P Sbjct: 241 VP 242 >UniRef50_A5N491 Transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N491_CLOK5 Length = 301 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 65/242 (26%), Positives = 117/242 (48%), Gaps = 14/242 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D+ L+TF+ VA L F A + +QS+VS ++ LE+ +G +LF R GR L E+ Sbjct: 1 MDIKQLQTFITVAKLLNFREAGEELNYSQSSVSDHIRSLEKELGTKLFERLGRKVFLNEN 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSN--LQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G +L+ A KI++ +++ L N + G+L IGA++ + LP +L +YP + Sbjct: 61 GKKLISLAEKIIQ-DEKEIQGLFNKNEKISGLLRIGAAETLSVFWLPPILKEYRIIYPDV 119 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFK---ALNLRTSPTHWYCAAEYILQKGE 185 + +R+ +ML +D+ + H S + +N+ T + A ++ L Sbjct: 120 KVTLRMDDCVEFPKMLSHNMIDVAFSLHDQSQHEYISQINILKDSTVFVAAPDHPLVNLN 179 Query: 186 PIPLVLLDDPS--------PFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA 237 I + L++ S +R + L + I S+L A++ VK GLG++ Sbjct: 180 RIKIHELENQSFILPEAECCYRVELEELLKENGIKIDTIMELSSLEAIKQCVKIGLGISL 239 Query: 238 RP 239 P Sbjct: 240 LP 241 >UniRef50_B9Z0M9 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=B9Z0M9_9NEIS Length = 316 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 74/250 (29%), Positives = 115/250 (46%), Gaps = 14/250 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D+ LR +AVA+ + AA + Q AVS+Q++ LE+ +G LF R LTE Sbjct: 1 MDIKQLRALIAVAETGSVTRAAEMLHVVQPAVSRQLRLLEEDIGAALFERGRYGMELTEQ 60 Query: 71 GIQLLGYARKILRFNDEACSSLM--FSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L Y R+ LR D A + + + +QG++TIG +AD + LL VSS+YP + Sbjct: 61 GEILAEYTRRALRELDRARAEIQPTSATIQGIVTIGLLPSTADLLASPLLTTVSSLYPGV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLR---------TSPTHWYCAAEY 179 L + + ++ LES EVD + + P LN+ P AAE Sbjct: 121 RLRISIGFAGHLQNWLESGEVDAAL-LYDPKPSPMLNVSPLLEENLWVVGPASSNFAAER 179 Query: 180 ILQKGE--PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA 237 + E +PL+L P R +V A ++ + + R V AG G+T Sbjct: 180 PVSLAELAGVPLILPSAPHALRTLVEHAFALAKQEVKVVVETNAMSVQRNLVLAGHGLTI 239 Query: 238 RPVEMMSPDL 247 P ++ D+ Sbjct: 240 LPSIAVADDI 249 >UniRef50_C3BJ72 YwqM (Probable transcriptional regulator YwqM) n=4 Tax=Bacillus RepID=C3BJ72_9BACI Length = 298 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 63/241 (26%), Positives = 112/241 (46%), Gaps = 14/241 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L+TF+ VA+ F A + TQS ++ ++ LE+ +G LF R G+ +LT+ Sbjct: 1 MELRHLKTFIIVAESGGFTRAGEQLGYTQSTITNHIRSLEEEIGNPLFDRLGKKVILTDV 60 Query: 71 GIQLLGYARKILRFNDEAC-SSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +L YA KIL ++EA SS M G + IGA++ LP +L YP++ Sbjct: 61 GEHMLSYAHKILELSNEALESSQMNGKFSGTIRIGANESLMIYRLPAVLYEFKRKYPQVH 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAF-----------KALNLRTSPTHWYCAAE 178 + ++ + + L+S + D + TH P + + L P H Sbjct: 121 IILQPSESQELHNELKSGKFDFALFTH-PEQLGTDIVTHSLVQEKIVLIAPPKHPLTKKV 179 Query: 179 YILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + ++LL +P +RD++ + + I + S + A++ V GLG++ Sbjct: 180 SVSPADLEGEMLLLTEPGSYRDLLERRIKEDGINCSHIHFWS-IEAIKQTVMCGLGISYL 238 Query: 239 P 239 P Sbjct: 239 P 239 >UniRef50_A8I530 Transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I530_AZOC5 Length = 320 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 73/248 (29%), Positives = 124/248 (50%), Gaps = 18/248 (7%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +++ L TFV VA L +F++AA +C TQ+AVS ++ LE+ +G LF R RN LT Sbjct: 1 MNIRFLETFVWVARLRSFSSAADKLCTTQAAVSNRIATLERDLGVRLFERDLRNVSLTPQ 60 Query: 71 GIQLLGYARKILRFNDEACSSLM-FSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G + L A I+R +E + S+L+G + IG D LP L+ V + YP + Sbjct: 61 GERALAQAETIVRLTEELRLGVSEASSLRGRIAIGTIDSIVYAWLPKLIEAVKATYPDVD 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALN--LRTSPTHWYCAAEYILQKGEPI 187 +D+ V + ++ +L ++V+L + A + N L T HW+ AA ++ G + Sbjct: 121 IDLTVDNSLTVSRLLLDRQVNLALIAGPVLAAECSNIDLCTYQCHWF-AAPHLGLHGRRL 179 Query: 188 PLV-LLDDP--------SPFRDMVLATLNKADIPWRLAYV----ASTLPAVRAAVKAGLG 234 LV ++ +P P ++ VL + A + L V +++L + + G+G Sbjct: 180 SLVDIVANPIFAFSKGSQPHQN-VLRLMESAGLDANLNLVRILNSNSLATITRLARDGMG 238 Query: 235 VTARPVEM 242 V P E+ Sbjct: 239 VAVLPTEV 246 >UniRef50_A9KJB0 Transcriptional regulator, LysR family n=4 Tax=Clostridiales RepID=A9KJB0_CLOPH Length = 300 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 63/249 (25%), Positives = 121/249 (48%), Gaps = 12/249 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +++ ++TF+ VA F+ AA + +QS ++ Q+Q+LE+ +G +LF R G+ LTE Sbjct: 1 MEIRNIKTFIKVAATQNFSKAAEQLGYSQSTITIQIQQLEKELGTQLFERIGKQVSLTEQ 60 Query: 71 GIQLLGYARKILRFNDEACS-SLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G L +A +I+R +EA + S +G L IG+ + A ILP LL R + PK+ Sbjct: 61 GEVFLNHANEIMRVTNEAAVFARETSTPEGTLRIGSVESLATAILPELLLRFHNACPKVE 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVT----THRPSAFKALN------LRTSPTHWYCAAEY 179 ++ + + M+ + E+DL +T + +A+ TS H + E Sbjct: 121 TIIKTDMSDGLINMVRNNEIDLFLTLDQKIYGSEWVRAVQQEEDIIFVTSSKHSFSGKEK 180 Query: 180 I-LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 I ++ + P +L + +R + L++ +I + + ++ G+GV+ Sbjct: 181 INIETLQNEPFLLTEKGVSYRYELERILSEKEIVIKPVLEIGNTETIIHLLEHGMGVSFL 240 Query: 239 PVEMMSPDL 247 P+ +S + Sbjct: 241 PMFSVSKSI 249 >UniRef50_Q1IMI0 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IMI0_ACIBL Length = 305 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 69/242 (28%), Positives = 124/242 (51%), Gaps = 15/242 (6%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +DL L TF+ VA +F+ AA + RTQ A+SQ +++LE+ +G+ LF R R +LT+ Sbjct: 1 MDLFQLETFLTVAREGSFSKAAKKLYRTQPAISQTIRKLEEEIGEGLFDRSSREGILTDA 60 Query: 71 GIQLLGYARKILRFNDEACSSL--MFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L YA+K+L EA S++ + +G L+IGA++ + +LP +L++ P + Sbjct: 61 GKVLEEYAQKLLNLRTEALSAVGELRQLERGRLSIGANEVTCLYLLP-MLDKYRDRCPMV 119 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHR---PSAFKALNLR------TSPTHWYCAAEY 179 ++ V+ + + E L ++ ++L + T++ P + R P+H +A Sbjct: 120 SIAVQRTMASLVPEELLNRSIELGLVTYKIDQPELKSVVIYRDELIFVMHPSHPLASAGM 179 Query: 180 --ILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA 237 I Q G + V + PSP+R V+ T ++P + T+ A++ V G+ Sbjct: 180 LNINQLGAEV-FVAHNVPSPYRAKVIDTFKHKNVPLHMHVELPTVEAIKKFVARERGLAL 238 Query: 238 RP 239 P Sbjct: 239 LP 240 >UniRef50_A0KPQ5 Transcriptional regulator n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KPQ5_AERHH Length = 307 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 73/244 (29%), Positives = 112/244 (45%), Gaps = 13/244 (5%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +N +R FVAVAD + + AAA + +QSAV+ ++ LE +G LF R+ R LT Sbjct: 1 MNFTFRQIRYFVAVADSFSVSRAAAELHISQSAVTSAIRELETELGAALFERNPRGVSLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSL--MFSNLQGVLTIGASDESADTILPFLLNRVSSVYP 126 G Q L +AR+IL EA SL + QG LTIG + A L L R +P Sbjct: 61 TQGHQFLLHARRILGAMTEAGQSLKAVAQQDQGRLTIGVTTLVAGYYLSEALGRFRRAFP 120 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLMV----TTHRPSAFKALNLRTSPTHWYCAAEYILQ 182 + ++V+ Y+ + + EVD+ + T R AF L SP + AA + L Sbjct: 121 AVQIEVKEDEQPYLEHQIVNGEVDVGILMTNRTIRQEAFDTELLTRSPLRVWLAANHPLC 180 Query: 183 KGEPIPLVLLDD-------PSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGV 235 + L L + ++ L + I R+ +++ AVR+ V + LG+ Sbjct: 181 AESTLSLKALGEEPMISLTADQLDQIIGGGLRRYGIAPRIVLRTASVEAVRSLVASQLGL 240 Query: 236 TARP 239 P Sbjct: 241 ALLP 244 >UniRef50_Q46QV9 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=Q46QV9_RALEJ Length = 295 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 79/146 (54%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L F AVA + AA A+ R QS V+ ++++LE+ +G LF R R +LT Sbjct: 1 MELAELEIFRAVAREQSITRAAKALARVQSNVTTRVKQLEESLGVTLFQRDSRKMILTPE 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LLGYA ++L +EA S+ S G L +G+ + SA T+LP L + + +P++ L Sbjct: 61 GQRLLGYAEQMLTLAEEARQSMRLSAPSGTLRLGSMESSAATLLPKPLAQFHAAWPEVEL 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTH 156 + ++ + + +D V H Sbjct: 121 KLTTGTTGFLVDAVLGHRLDCAVVAH 146 >UniRef50_A9ILC7 Transcriptional regulator, LysR-family n=3 Tax=Bordetella RepID=A9ILC7_BORPD Length = 306 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 78/288 (27%), Positives = 133/288 (46%), Gaps = 19/288 (6%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +DL + TF V+ L +F AA+ + TQ AVSQ++ LE+ +G LF R R LT Sbjct: 5 IDLRNIETFFWVSTLGSFRAASEKLNTTQPAVSQRIASLERDLGVRLFERDARGVTLTGK 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSN-LQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL +A ++L+ + + N ++G L IG ++ T LP L+ + + YP L Sbjct: 65 GHELLSHAERMLQLRRDMLQAAREQNVMRGPLRIGVAETIVQTWLPALVEYLHAAYPALV 124 Query: 130 LDVRVKRNAYMAEMLESQEVDL--MVTTHRPSAFKALNLRTSPTHWYCAAE-------YI 180 L + V + L ++++DL ++ + F+ L L P W + Sbjct: 125 LQIEVDTTPVLRSHLTARQIDLAFLMGPVVEARFENLPLCAYPLAWVASPRLALGPEPLT 184 Query: 181 LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA-RP 239 LQ+ +P++ S V L +A + Y +++L V +G + P Sbjct: 185 LQRIGTLPVITYPSSSSPYQFVRDMLTRAGVQAPRMYGSASLSMVVRMTLDCIGTSVIAP 244 Query: 240 V----EMMSPDLRVLS-GVDGLPPLPDTEYLLCYDPSSNNELAQVIYQ 282 V E+ S +LR+L D PLPD + + ++ +A+VI Q Sbjct: 245 VFLDKELASGELRLLDVQAD---PLPDLAFTATWVQGPDSHVARVIAQ 289 >UniRef50_B1M8N3 Transcriptional regulator, LysR family n=35 Tax=Proteobacteria RepID=B1M8N3_METRJ Length = 332 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 65/248 (26%), Positives = 121/248 (48%), Gaps = 21/248 (8%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 I +D+ LRT + VA+L + + AA + Q A+S+Q+++LEQ +G +LF RHGR ++T Sbjct: 10 IAMDIAQLRTLIHVAELGSVSKAADRLNIAQPALSRQIRQLEQELGTDLFERHGRGMVIT 69 Query: 69 EHGIQLLGYARKIL----RFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSV 124 E G +L +A +++ D S ++ +G +++G + A+ + L+ + Sbjct: 70 ETGRAVLVHASRVMAEMEAIRDTVASG--RTSFRGTVSVGTTPTVAEIVTVPLVTALRRT 127 Query: 125 YPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSP----THWYCAAEYI 180 +P LA+ + + ++ + L+ ++D+ V ++ P LR P T Sbjct: 128 HPDLAVRLSAAYSGHILDWLQRGQIDVAV-SYNPRRLH--TLRIVPIMIETLLLVGPGGR 184 Query: 181 LQKGEPIPLVLLDD-----PSP---FRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAG 232 + G P+P L PSP RD+ +A I R+ A + ++ V+AG Sbjct: 185 EEPGAPVPFAGLAGMDLVLPSPGHMLRDIAHDCARRAGIELRVVVEADSFQSLINLVRAG 244 Query: 233 LGVTARPV 240 +G T P+ Sbjct: 245 IGATVLPL 252 >UniRef50_Q28P74 Transcriptional regulator, LysR family n=6 Tax=Rhodobacterales RepID=Q28P74_JANSC Length = 292 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 76/255 (29%), Positives = 122/255 (47%), Gaps = 7/255 (2%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + + +RTF+ VA L F A+ + +Q AVS ++ LE + LF R +LT+H Sbjct: 1 MTFEQIRTFLWVARLGGFRKASDRLNLSQPAVSTRISNLEGELQVPLFERGPGQLILTKH 60 Query: 71 GIQLLGYARKILRFNDEACSSLM-FSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G QLL YA ++L +E + + S +G+ IGAS+ A LP L VS YP++ Sbjct: 61 GQQLLAYAEQMLFVEEEIKNRVGNASETEGLFRIGASETIAQAWLPEFLEAVSEAYPRVN 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALN--LRTSPTHWYCAAE-YILQKGEP 186 +D+ V + + + L + +DL+ S F N L HWY AA + + GE Sbjct: 121 VDLTVDISGSLRDALVERRLDLVFLMGPISEFSVKNTALPQFDLHWYRAAHLHDVNLGE- 179 Query: 187 IPLVLLDDPS-PFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSP 245 IP++ + P R++ + R+ AS ++R + AG+ V P + +P Sbjct: 180 IPVISYSSKTRPHRELTSQLAARVGPKMRVFSSASLSASLR-MIAAGIAVGPYPRVLATP 238 Query: 246 DLRVLSGVDGLPPLP 260 L V+ P LP Sbjct: 239 FLEAGQVVEFDPDLP 253 >UniRef50_B6FPK4 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPK4_9CLOT Length = 301 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 10/242 (4%) Query: 16 LRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQLL 75 LRTFV V + A+ + +Q +VS +Q LE LF R G+ +TE G L Sbjct: 6 LRTFVIVFQKESITKASEILHVSQPSVSLAIQELENYYHIRLFDRIGKRLSITEQGKWLY 65 Query: 76 GYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVRVK 135 YA I+ DE + + N +G L IG+S + ILP L+ Y ++ + V V Sbjct: 66 DYALHIVSMFDEMETEVKTWNNKGTLRIGSSITIGNFILPQLIEEFQKRYREVEIKVSVC 125 Query: 136 RNAYMAEMLESQEVDLMVTTHRP--SAFKALNLRTSPTHWYCAAEYILQKGEPI------ 187 + + + + EVDL + + + +L P CAA L K E I Sbjct: 126 NTKTIEQYILNNEVDLALIEGKTEYEQIQMEHLMEDPLCLICAANSELVKQEKISLIDLE 185 Query: 188 --PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSP 245 P++L + S R+M+ +L I R+ + + + A+ AV LG++ P ++ Sbjct: 186 RYPMILRERGSAVREMIEESLGYHQIHHRVIWESVSTQAIIRAVAKKLGISILPYLLVRD 245 Query: 246 DL 247 +L Sbjct: 246 EL 247 >UniRef50_Q0FKK2 Transcriptional regulatory protein n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FKK2_9RHOB Length = 293 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 70/296 (23%), Positives = 133/296 (44%), Gaps = 39/296 (13%) Query: 12 DLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHG 71 D++++R+ V F AAA A QSA+S++++ LE +G +F R GR L+ G Sbjct: 6 DIEIIRS---VVRHGGFRAAADATGLAQSAISRRIRHLEDRMGITIFERAGRGVRLSATG 62 Query: 72 IQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALD 131 +L A ++ D L + GV+ +G ++ T+LP +L + + +P L + Sbjct: 63 RRLCDEAEMLIAQRDRILEELTQGVMAGVVRLGVAETMTHTLLPRMLTTLRARHPMLRFE 122 Query: 132 VRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSP---THWYCAAEYILQKGEPIP 188 + V + M + L +D+++ R A + + L P W+ + E+ Sbjct: 123 ISVDTSEQMGQALRDDALDVVIML-RDQAPRGIALTPLPPVRMGWFVSPEHF-------- 173 Query: 189 LVLLDDPSPFRDMV---LATLNKADIPWR--------------LAYVASTLPAVRAAVKA 231 L P+ D+ + + K IP R + +++L + V+ Sbjct: 174 --TLPSPAGIDDLAALPIVSFPKTTIPHRQVLEVMTAGRRKPATVHGSASLATMVNLVQQ 231 Query: 232 GLGVTARPVEMMS--PDLRVLSGVDGLPP--LPDTEYLLCYDPSSNNELAQVIYQA 283 G G+ P +++ P +L +D LP LP E+++C+DP N E+ + + +A Sbjct: 232 GFGIGTIPHDIVEAWPQT-MLQEIDVLPEANLPRLEFVICHDPERNEEIGREVTRA 286 >UniRef50_A8GAF5 Transcriptional regulator, LysR family n=2 Tax=Serratia RepID=A8GAF5_SERP5 Length = 302 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 65/258 (25%), Positives = 124/258 (48%), Gaps = 2/258 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 L +D LR +V D + AA + +QSAVS +++RLE+ +G+ L R G T Sbjct: 17 LSIDALRALQSVIDTGSMTRAAQQLNLSQSAVSWKIKRLEEQLGRTLVNRQGMTLTATAD 76 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LL + R+IL+ +D A + S LQG + GA+++ + L LL + +P++ + Sbjct: 77 GEALLSHGRQILQAHDRALAHFSPSLLQGKVRFGATEQMSLPQLAALLAAFTHQHPQVDV 136 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALN--LRTSPTHWYCAAEYILQKGEPIP 188 + ++++ + LE +DL++ A + L T HW + Q G+ + Sbjct: 137 QLVIEQSQVLRNALEQGALDLVLHQQFCDTLSAEDVVLATERIHWCVPPGWRYQPGDRVK 196 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 LV +R + L+ A I +++ ++ + AA+ AG+G+ + + ++ Sbjct: 197 LVSYGPDCFYRRLAQERLSAAGIACQVSVECPSVAGMLAAISAGMGIGLLNQQSVDQRVQ 256 Query: 249 VLSGVDGLPPLPDTEYLL 266 + + + PLP + L Sbjct: 257 IEANFERSLPLPPVAHAL 274 >UniRef50_Q1IRZ3 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRZ3_ACIBL Length = 296 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 111/247 (44%), Gaps = 12/247 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +++ LR F AVA TF A+ Q ++SQQ+ +LE +G LF R R+ LT Sbjct: 1 MEVHQLRYFCAVARHGTFTRASEVEHVAQPSLSQQILKLEAELGARLFDRLPRSAKLTVF 60 Query: 71 GIQLLGYARKILRFNDEACSSL--MFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L A +ILR DEA + L M SN +G +T+G A +LP LLN +S +P + Sbjct: 61 GKAFLPNAERILRQLDEAKTELLEMTSNEKGEVTVGIIPTIAAYLLPKLLNGLSVRHPDV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCA----------AE 178 + + + + L +D+ + + + +Y A Sbjct: 121 TVKISEDITPVLLQRLHDGSIDMAIAALPIPGTELASEELFEEKFYAVLPEKHRRASRAS 180 Query: 179 YILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 L P +LL + FRD V+A N+A + + + + + A V AG+GV+A Sbjct: 181 ISLADLNREPFLLLKEGHCFRDSVIAACNQAAMSPSVVFESGQFATILAMVSAGMGVSAV 240 Query: 239 PVEMMSP 245 P + P Sbjct: 241 PAMAVQP 247 >UniRef50_C1XNG0 Transcriptional regulator, COG0583 n=2 Tax=Meiothermus RepID=C1XNG0_MEIRU Length = 312 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 67/249 (26%), Positives = 114/249 (45%), Gaps = 13/249 (5%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 + + L L F+AVA+ + + A ++ TQS V++ +++LE+ +G ELF RH R +LT Sbjct: 1 MQISLKQLVYFIAVAESGSISKALTSLNVTQSVVTEAIKKLEETLGAELFTRHARGMILT 60 Query: 69 EHGIQLLGYARKILRF--NDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYP 126 G Q L +A ++L N E G L +G + LP+LL+R V+P Sbjct: 61 HAGHQFLRHAHEVLAALRNAEQAIRERPDATTGQLNLGVTSLVTAYYLPYLLDRFERVFP 120 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRT---SPTHWYCAAEYILQK 183 + + V R Y+ +L + E+D+ V +AL RT +P + + L + Sbjct: 121 GVQVAVVEDRRGYIEHLLINGELDVAVMNVSMVDKQALETRTLLRAPWRVWLPTNHPLVQ 180 Query: 184 GEPIPLVLLDDP-------SPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 E + L L + ++ + P R+A ++ A+R+ V G+GV Sbjct: 181 QEAVSLENLREERFLYLKNDELEEVTQQIYRLSGFP-RVAVRTDSIEAMRSLVALGIGVA 239 Query: 237 ARPVEMMSP 245 P M P Sbjct: 240 VLPNLMYRP 248 >UniRef50_C7H9N7 Transcriptional regulator, LysR family n=2 Tax=Faecalibacterium prausnitzii RepID=C7H9N7_9FIRM Length = 291 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 50/149 (33%), Positives = 84/149 (56%), Gaps = 1/149 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L + TF+ +A+L++F+ AA + +QSAVS Q+ +LE + LF R G+ LT+ Sbjct: 1 MELRTINTFLHIAELHSFSRAARELGYSQSAVSAQVAQLEAELETPLFDRVGKTVRLTDA 60 Query: 71 GIQLLGYARKILRFNDEACSSLM-FSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G L YAR +L ++A ++L + G L + +D T LP LL R ++ P++ Sbjct: 61 GQTFLTYARSLLATAEQAKAALQPARQVSGTLRVALADSVCSTFLPDLLQRYHALCPQVE 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRP 158 L +R + M +ML S ++DL T +P Sbjct: 121 LVLRTATDDEMLQMLGSNQIDLAYTLDKP 149 >UniRef50_Q218F8 Transcriptional regulator, LysR family n=12 Tax=Rhizobiales RepID=Q218F8_RHOPB Length = 321 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 66/247 (26%), Positives = 117/247 (47%), Gaps = 12/247 (4%) Query: 12 DLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHG 71 D + TF+ V L +F AA + TQ A+SQ++ +LE+ +G +L R R+ T G Sbjct: 3 DFKAIETFLWVVTLGSFRGAAQKLNTTQPAISQRIAQLERELGVKLLQRDHRSASPTPSG 62 Query: 72 IQLLGYARKILRFNDEACSSLM-FSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 Q++ YA K++ E + + S ++GVL +G ++ T LP L+ V+ YP L+L Sbjct: 63 RQMMVYAEKLIGLRSEMLAVVGDRSAMRGVLRLGVAETIVHTWLPQLIKSVNRAYPNLSL 122 Query: 131 DVRVKRNAYMAEMLESQEVDLM---------VTTHRPSAFKALNLRTSPTHWYCAAEYIL 181 ++ V+ + L +QE+DL +R + SP+ A L Sbjct: 123 EIEVEITPDLRARLMAQEIDLAFLLGPLPDPTVRNRLLCEYPVGFLASPSLGLGDATLTL 182 Query: 182 QKGEPIPLVLLDDPSPFRDMVLATLNKADI-PWRLAYVASTLPAVRAAVKAGLGVTARPV 240 + P++ S + + + N+ ++ P RL AS + AV+ GLG+ P Sbjct: 183 RDLAKHPIITFPRKSQPYETIRSLFNRPELPPIRLHASASLATVIHMAVE-GLGIAVIPT 241 Query: 241 EMMSPDL 247 +++ +L Sbjct: 242 DIVEAEL 248 >UniRef50_C6RKS4 Transcriptional regulator, LysR family n=2 Tax=Acinetobacter radioresistens RepID=C6RKS4_ACIRA Length = 311 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 123/266 (46%), Gaps = 14/266 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D+ LRTFV + ++ AAA + Q AVS+Q+Q LE+ +G +LF R LTE Sbjct: 1 MDIKQLRTFVTILEVENLTKAAAMLNIVQPAVSRQIQMLEEELGVKLFNRSRHGMALTED 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSN--LQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L YAR+IL + A L + ++G + IG ++ + ++ + YP++ Sbjct: 61 GKLLEPYARRILEEVETAKLELTANKGMIRGKVHIGVLSSISELLSALIMKLIKEKYPEV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDL-MVTTHRPSAFKALN-LRTSPTHWYCAAEYILQ---- 182 + + V + ++ E LE+ ++DL ++ PS L L P +A+ LQ Sbjct: 121 QVKISVGYSGHLKEWLEAGDIDLALMYDTTPSKLIDLTPLVKEPLFLIGSAQSTLQQNEV 180 Query: 183 ----KGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 K EP PL+L P R ++ + + ++ + L + V G T Sbjct: 181 LELKKIEPFPLILPFHPHRLRSLIEQAYKQNEANLKIYAETNDLNIQKQLVIQDFGYTIL 240 Query: 239 PVEMMSPDLRVLSGVDGLPPLPDTEY 264 P+ + + R +G+ + P+ D + Sbjct: 241 PLVSVINEYR--AGLIKVTPILDPSF 264 >UniRef50_C0CUF5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUF5_9CLOT Length = 302 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 63/246 (25%), Positives = 118/246 (47%), Gaps = 14/246 (5%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +++ L LR F+ V + + AA + Q +VS ++ +E+ G +LF R + LT Sbjct: 1 MDVTLRHLRIFLTVCEAGSMTGAANRLFTAQPSVSLAIREMEEYYGVKLFDRISKKLFLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 E G Q+L YAR I+ DE + ++ G L +GAS +LP + ++ +YP+L Sbjct: 61 EAGHQVLEYARHIIALFDEMEQEVRNPDMSGTLRVGASITVGTFLLPGYVKELTRLYPEL 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTH-------RPSAFKA--LNLRTSPTHWYCAAEY 179 ++ R++ + + + + S E+DL V +F L P H + + Sbjct: 121 RVEARIENSNNIEKCVLSNEIDLGVIEGIAHSRYISSESFHGDRLAFVCPPGHRFAGKQD 180 Query: 180 I-LQKGEPIPLVLLDDPSPFRDMV--LATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 + L + +L + S R++ LA ++ DI R+A+ +++ A+ V AG G++ Sbjct: 181 VKLGDLQSESFILREKGSAGREIFDGLAAAHELDI--RIAWQSTSNQAIIHGVAAGFGLS 238 Query: 237 ARPVEM 242 P + Sbjct: 239 VLPASL 244 >UniRef50_A8GI04 Transcriptional regulator, LysR family n=2 Tax=Serratia RepID=A8GI04_SERP5 Length = 307 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 75/245 (30%), Positives = 112/245 (45%), Gaps = 19/245 (7%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + L +R F+AVA+ + +AAA AV +QS+++ +Q+LE +G LF RH + LT Sbjct: 2 MTLRQIRHFIAVAETGSISAAAQAVFVSQSSLTLAIQQLETDIGVRLFDRHAKGMNLTHQ 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFS--NLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G Q L + IL D A SL +L G LTIG + A L LL R S YP + Sbjct: 62 GHQFLRQSYLILATVDNAKRSLQLGTESLTGKLTIGVTSLVAGYFLVELLKRFKSAYPNV 121 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMV----TTHRPSAFKALNLRTSPTHWYCAAEYILQKG 184 + + Y+ +L S E+D+ V A + L SP + + L Sbjct: 122 TIQMIEDERPYIEHLLVSGEIDIGVLILSNIEDRDALQTEVLMHSPYRLWLPPLHPLLDH 181 Query: 185 EPI--------PLVLL--DDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLG 234 E I PL+ L D+ + A +A + +A + AVR+ V AG+G Sbjct: 182 ESIGLADVAKLPLIQLNADEMDVHARRIWA---RAGVKPEIAMKTGSTEAVRSLVAAGMG 238 Query: 235 VTARP 239 V+ P Sbjct: 239 VSILP 243 >UniRef50_A3X5F2 Probable transcriptional regulator n=1 Tax=Roseobacter sp. MED193 RepID=A3X5F2_9RHOB Length = 299 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 85/270 (31%), Positives = 125/270 (46%), Gaps = 32/270 (11%) Query: 12 DLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHG 71 DL+LLR FV VAD +F+A A + T SAVS+Q+ RLE+ + L R R + LTE G Sbjct: 3 DLNLLRLFVLVADQGSFSAVARSTRATPSAVSRQISRLEENLNTRLLQRTTRRQELTEAG 62 Query: 72 IQLLGYARKILRFNDEACSSL-MFSNL-QGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 L +AR+I+ D A ++ SN GVL I A + A T+L +L YP Sbjct: 63 QVYLSHARQIIEDVDTARQAVSRLSNAPSGVLRITAEADLALTLLSPVLPEFLERYP--- 119 Query: 130 LDVRVK-RNAYMAEMLESQEVDLMVTTHR--PSAFKALNLRTSPTHWYCAAEYILQKGEP 186 D+RV+ + E L S+ +D+ + S+ A L S + + EY+ Q P Sbjct: 120 -DLRVQLHTSSTMEDLVSRGIDVAIRVGHLSDSSLIAKRLTMSRSLLVASPEYLEQDIPP 178 Query: 187 IPLVLLDDPSPFRDMVLATLNKAD---IPWRLA-------------YVASTLPAVRAAVK 230 P R+ + K D + WR AS+L ++ A K Sbjct: 179 ------QQPEDLRNHSCLSF-KVDTDLVTWRFKSGEEVTNVPVTGPIQASSLVLLKEAAK 231 Query: 231 AGLGVTARPVEMMSPDLRVLSGVDGLPPLP 260 +GLG+ PV M+ +L+ + V LP P Sbjct: 232 SGLGIAMLPVWMLRAELKSGTLVPVLPGFP 261 >UniRef50_B2JRL2 Transcriptional regulator, LysR family n=2 Tax=cellular organisms RepID=B2JRL2_BURP8 Length = 304 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 14/232 (6%) Query: 16 LRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARH-GRNKL-LTEHGIQ 73 L+ F+ VA + AA + SA+S+Q+Q LE+ + ELF RH G+ L LT G Sbjct: 7 LKYFIGVARSGSIRRAAEQLHVAASAISRQIQMLEEELNAELFERHRGQKSLRLTAAGEL 66 Query: 74 LLGYARKILRFNDEACSSL-MFSNLQ-GVLTIGASDESADTILPFLLNRVSSVYPKLALD 131 LL Y R I D+ + + LQ G + +GAS+ + LP L+R S YP + + Sbjct: 67 LLNYTRLIENELDQVRADIRAIDTLQKGTVRLGASESFSREFLPSFLHRFHSQYPGITFN 126 Query: 132 VRVKRNAYMAEMLESQEVDLMVTTHRPSAFKAL---------NLRTSPTHWYCAAEYI-L 181 V V + E+L E+D+ + P AF L S TH + + + Sbjct: 127 VIVGGGGKLVELLAKDEIDVALAYRAPDAFDVQVIAETHVTPCLLVSATHPFANRRSVDI 186 Query: 182 QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGL 233 ++ I + L D+ R+ + +KA I R V ++ +RAA +GL Sbjct: 187 EECGEIEIALPDESLTIRESYVRMFSKARIRPRTILVTNSFELMRAAAVSGL 238 >UniRef50_B2T513 Transcriptional regulator, LysR family n=65 Tax=Proteobacteria RepID=B2T513_BURPP Length = 305 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 107/247 (43%), Gaps = 25/247 (10%) Query: 14 DLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQ 73 D L TF AVA+ + AA A+ +Q AVS Q+++L+ G+ L+ R GR LT G Q Sbjct: 4 DQLITFAAVAEHRNISRAAVALHLSQPAVSGQLRQLQDEFGEPLYQRDGRGVRLTPAGEQ 63 Query: 74 LLGYARKILRF--NDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALD 131 L YA ++ A + QG L IGAS A +LP+L+ YP + L Sbjct: 64 LASYATRLRDTWRQAHAYRDALRGLEQGTLRIGASTTPASYLLPYLIADFHRRYPDVTLH 123 Query: 132 VRVKRNAYMAEMLESQEV-------------DLMVTTHRPSAFKALNLRTSPTHWYCAAE 178 + L+S ++ D V + R A+ RT P + Sbjct: 124 TADGNTTEIVGALDSVDIAMIEGPVGVDLPPDTAVHSWREDEIVAIMPRTHPLAELALSA 183 Query: 179 YILQKGE----------PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAA 228 + G+ PLVL + S R +V +A +P R+A + + V+ A Sbjct: 184 QSAEVGQGGQAGLAAFGEYPLVLREAGSGVRQIVERAFARAGVPMRVALEIAGVEGVKEA 243 Query: 229 VKAGLGV 235 V+AG+G+ Sbjct: 244 VRAGMGI 250 >UniRef50_B1KU62 Transcriptional regulator, LysR family n=10 Tax=Clostridium RepID=B1KU62_CLOBM Length = 293 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 12/234 (5%) Query: 16 LRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQLL 75 LR F VA+ A + +Q AVSQ + LE +G +LF R R LT G L Sbjct: 6 LRIFYEVAEKLNMTEVAEKLYISQPAVSQTILELESELGVKLFDRINRRLYLTNEGELFL 65 Query: 76 GYARKILRFNDEACSSLMFSN--LQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVR 133 Y R+IL D+A SL N G L IGAS ILP ++ + + Y + + Sbjct: 66 NYVRRILNMYDDAIRSLKDINSLKTGKLKIGASTTIGIYILPDIIGKFTKQYKGIDTSIA 125 Query: 134 VKRNAYMAEMLESQEVDLMVT---THRPSAFK------ALNLRTSPTH-WYCAAEYILQK 183 ++ +++M+ +D + K L TSP H W E + + Sbjct: 126 IENTKLISDMILDNSIDFAFVEGPVYNEEIIKENFCDDELVFITSPEHPWSNKDEISITE 185 Query: 184 GEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA 237 + +++ + S R++ + + ++ + +A+ A++ AV+AGLGV+ Sbjct: 186 VDKEKIIMREIGSGTREVFESYMTANNVNYNIAFELGNTEAIKKAVEAGLGVSC 239 >UniRef50_B4UJ91 Transcriptional regulator, LysR family n=3 Tax=Anaeromyxobacter RepID=B4UJ91_ANASK Length = 311 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 71/251 (28%), Positives = 117/251 (46%), Gaps = 13/251 (5%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 + +DL L AVA+ +F AA + RTQ AVSQ ++RLE+ VG L R R+ LT Sbjct: 10 VRMDLAQLELLAAVAEERSFTRAAERLRRTQPAVSQALRRLEEEVGATLVDRSSRDASLT 69 Query: 69 EHGIQLLGYARKILRFNDEACSSL-MFSNLQ-GVLTIGASDESADTILPFLLNRVSSVYP 126 G L YAR++L+ +A +L +LQ G + + A++ +A +LP L +P Sbjct: 70 AEGEVLHDYARRMLKLRRDAGEALEALRDLQRGTVAVAANEYTATHLLPVLAE-FRRRHP 128 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLMVTTHRPS--AFKALNLRTSPTHWYCAAEYILQKG 184 +L ++V + + ++V+L V T+RP+ A + T E+ L + Sbjct: 129 RLRVEVHRALARDIPTAVLGRDVELGVVTYRPTQPGLVAQQIATDDLVLLVPPEHPLARR 188 Query: 185 EPIPLVLLDDP--------SPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 + + L SP R+ V+ + + P + TL AV+ V +GV Sbjct: 189 GTVSIRQLGGESFLAHHVRSPNRERVVKSFARHRTPLDIVMELPTLDAVKRLVVERVGVA 248 Query: 237 ARPVEMMSPDL 247 P + P+L Sbjct: 249 LMPARVAGPEL 259 >UniRef50_B8DKE3 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DKE3_DESVM Length = 307 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 74/244 (30%), Positives = 108/244 (44%), Gaps = 17/244 (6%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D+ L+TF+AVA +F AA ++ S V+ Q++ LE+ +G LF R GR LLT+H Sbjct: 1 MDIRHLKTFLAVAAGLSFRKAAESLHYAPSTVTAQIRALEEDLGAPLFERTGRRVLLTDH 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LL AR+I D+A ++ G L++ S LP L R +P + Sbjct: 61 GRRLLPRARRIAEMADDARRAVTHDADSGELSVRMSQSLGMLCLPEALRRFRVRFPATRV 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI--- 187 V +A L EVDL + RP A +++ T H A I G P+ Sbjct: 121 HVATASRHGLAADLRHGEVDLALLLGRPFAADGVDMETL-RHEPLAC--IAAPGSPLAGH 177 Query: 188 -----------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 PLVL R + TL A + S++ V+ V AGLGV Sbjct: 178 GRVTPADLAGQPLVLTRHVWSLRPAIEQTLAAAHVQPGSVLECSSIVIVKRCVAAGLGVA 237 Query: 237 ARPV 240 P+ Sbjct: 238 VVPL 241 >UniRef50_B8HGN1 Transcriptional regulator, LysR family n=4 Tax=Micrococcineae RepID=B8HGN1_ARTCA Length = 312 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 76/266 (28%), Positives = 125/266 (46%), Gaps = 19/266 (7%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 D+ L + V + + AAA + + SAVSQQ+++LEQ VG+ L R R + TE Sbjct: 10 FDMRRLAVLLEVVEQGSITAAADLMMYSPSAVSQQLRKLEQEVGQPLLTRRSRGVVPTEA 69 Query: 71 GIQLLGYARKILRFNDEACSSL-MFSNLQ-GVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L G+AR+ILR A S L + L+ G LT+G A + LP ++ YP + Sbjct: 70 GQVLAGHARQILRQMKAAQSDLDQIAGLKRGALTVGTFPTLAGSFLPIVIRAFKKRYPAI 129 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRP-SAFKALNLRTS-----PTHWYCAAEYILQ 182 +L +R R + L+S L + P + F+ ++R + T AA + L Sbjct: 130 SLSLRSARFDELVADLQSGVTGLCLLWDYPWNRFQNDSIRVTEVFRESTVILVAASHPLA 189 Query: 183 KGEPIPLVLLDDPS--------PFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLG 234 + + + + L + S P +++ + + A + ++A+ +A V G+G Sbjct: 190 EQDQVGMEDLRNESWIVRAEAHPVVEVLQRSAHDAGFEPTIGFLANDYQEAQAMVSVGMG 249 Query: 235 VTARP---VEMMSPDLRVLSGVDGLP 257 V P V + PD+RVLS D P Sbjct: 250 VAMVPKTAVALQHPDVRVLSLGDEAP 275 >UniRef50_C6D4H5 Transcriptional regulator, LysR family n=4 Tax=Bacillales RepID=C6D4H5_PAESJ Length = 303 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 78/270 (28%), Positives = 128/270 (47%), Gaps = 19/270 (7%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 L+ L F VA+ +F+AAA ++ TQ AV+ Q+Q LE G +L R + LTE Sbjct: 3 LNFHQLHIFYTVAERGSFSAAAQSLHMTQPAVTMQVQSLEDYFGTKLLQRSTKRIDLTEA 62 Query: 71 GIQLLGYARK---ILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 G L+ YAR+ ++R D+A S+ L+G L +GAS + ILP LL +P+ Sbjct: 63 GKALMPYARRSIELIRDTDQAMSAFT-KQLKGRLQLGASLTIGEYILPRLLGPFGQTFPE 121 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMV----TTHRPSAFKA-----LNLRTSPTHWYCAAE 178 +++ ++V A + E + + ++ + H +A L L H + Sbjct: 122 ISISMKVMNTAQIIEEIINHQLTFGLIEAPVNHPDMQMEAVMSDELKLIVPKDHPLSKRQ 181 Query: 179 YI-LQKGEPIPLVLLDDPSPFRDMVLATLNKADI-PWRLAYVA--STLPAVRAAVKAGLG 234 + L + P V+ + S R ++ L + I P L V + AV++AV+AGLG Sbjct: 182 KVLLDEVADYPFVVREQGSGTRLVMEEQLKRKKIDPADLKIVMELGSTGAVKSAVEAGLG 241 Query: 235 VTARPVEMMSPDLRVLSGVDGLPPLPDTEY 264 V+ V S V G+ + P+ DT + Sbjct: 242 VSF--VSESSVKHEVALGLLHVIPIEDTRF 269 >UniRef50_C9RA29 Transcriptional regulator, LysR family n=1 Tax=Ammonifex degensii KC4 RepID=C9RA29_AMMDK Length = 295 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 79/239 (33%), Positives = 119/239 (49%), Gaps = 15/239 (6%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + L L+TFV +AD +F+ AA + TQ AVS+ + LE +G +L R R LTE Sbjct: 1 MKLSWLKTFVLIADKGSFSLAAKELDLTQPAVSKHIALLEAHLGVKLIDRDQRQVTLTEA 60 Query: 71 GIQLLGYARKILRFNDEACSSL--MFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LL YAR I++ +EA ++ + ++++G L IGAS +LP L+ R YP++ Sbjct: 61 GQALLPYARTIIKTLEEAEQAVRNLSASVRGTLNIGASTIPGHYVLPQLIRRFRERYPQV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPS--AFKALNLRTS------PT-HWYCAAEY 179 +++ + + + + ++ L PS A +A+ T PT H E Sbjct: 121 QVNLEIADTEKVWQQVLEHKICLGAVGAPPSSPALEAVPFATDEIVLVLPTPHPLAGKEV 180 Query: 180 I-LQKGEPIPLVLLDDPSPFRDMVLATLNKADI-PWRLAYVA--STLPAVRAAVKAGLG 234 I L+ + LV + S R V L + P RL VA ST AV AAV+AGLG Sbjct: 181 IPLELLPQLELVGREKGSGTRQTVEERLRQKGFPPERLRVVAEFSTTEAVLAAVEAGLG 239 >UniRef50_A8LLX5 Transcriptional regulator n=4 Tax=Rhodobacteraceae RepID=A8LLX5_DINSH Length = 302 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 17/256 (6%) Query: 5 NRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRN 64 P+ ++ +RTF+AV L + AAAA TQ AV+ +++ LE + LF R Sbjct: 2 TEPMARFTIEQIRTFLAVVRLGSLHRAAAAAGLTQPAVTARIKNLEHALSCALFERTSGG 61 Query: 65 KLLTEHGIQLLGYARKILRFNDEACSSLMF-SNLQGVLTIGASDESADTILPFLLNRVSS 123 LT+ G L+ +A K + ++ + L+G L IGAS+ A LP L++R+ Sbjct: 62 LKLTKRGELLVAHAEKFEHLVELVQRDVVDPAGLEGRLRIGASETVAACWLPELVSRLHG 121 Query: 124 VYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALN--LRTSPTHWYCAA---- 177 YPKL ++++V ++ + E L ++E+DL + S + N L WY AA Sbjct: 122 AYPKLEIELKVDVSSDLREALINREIDLAILLGPISEYSVDNILLPGFDLAWYTAASGRR 181 Query: 178 -----EYILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAG 232 Y+++ P+ L + P+R++ + P + +S+L A V A Sbjct: 182 VADETSYLMR---PV-LTYARNTRPYRELKAQLFERVG-PDASLFPSSSLSACFRLVAAD 236 Query: 233 LGVTARPVEMMSPDLR 248 +GV A P + +R Sbjct: 237 MGVAALPRSLGETHVR 252 >UniRef50_Q47V29 Substrate-binding transcriptional regulator, LysR family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47V29_COLP3 Length = 296 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 66/241 (27%), Positives = 116/241 (48%), Gaps = 19/241 (7%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +++ + L+ F A A L AA+ + +QSA SQ ++ LEQ +G LF R GR+ L+T Sbjct: 1 MSISIKKLQLFEATARLGKLTKAASELSLSQSAASQALKELEQSLGYPLFERTGRDLLIT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQ---GVLTIGASDESADTILPFLLNRVSSVY 125 E+G++ L R+I D SL +NL GVL + AS A +LP L+ + +Y Sbjct: 61 ENGLKSLPKVRQISDLLD----SLKLANLNTMSGVLRVVASATIATYLLPQLIAKFVKIY 116 Query: 126 PKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNL---RTSPTHWYCAAEYILQ 182 P++ ++ + + + L+ + + + P+ + L + + +CA E+ L Sbjct: 117 PEVIPEIHIGNTQMVIDYLDKGKASIGL-IEGPAVHRHLQITPWQVDKLQIFCAPEHSLA 175 Query: 183 KGEPIPL--------VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLG 234 + I L VL + S R + A + + L + A++ +VKAGLG Sbjct: 176 EKATINLEQLQQYSWVLREHGSGTRAIFDAAIEQMGAQISLGIELTRQSAIKESVKAGLG 235 Query: 235 V 235 + Sbjct: 236 L 236 >UniRef50_Q75NE2 Regulatory protein n=1 Tax=Pseudomonas sp. BS RepID=Q75NE2_9PSED Length = 283 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 72/287 (25%), Positives = 127/287 (44%), Gaps = 13/287 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D LLR+F VA + +F+ AA + +QS +S + +LE + +LF R R+ LT Sbjct: 1 MDTVLLRSFYKVASVGSFSEAARLLNASQSTISGHIAKLEDYLQTQLFRRTTRSCQLTTA 60 Query: 71 G----IQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDE-SADTILPFLLNRVSSVY 125 G + + I R +E C + M G + +G DE + L +L R ++ Sbjct: 61 GDLLLTHVTTLLQVIDRIEEEFCPARM----GGTIKLGLPDEYHLFSRLAPVLQRFMAMR 116 Query: 126 PKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGE 185 P + + V + + L +D + + + +L S W ++ L K E Sbjct: 117 PNVTIKVTSGLSFEHSRALADGFLDAALLREPLKSGQIADLCPSQLVWIGLPDFDLDKIE 176 Query: 186 PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSP 245 +PL + + L++A +PWR Y +TL +R AV++GL + A P E Sbjct: 177 VLPLAHISGHCLYFREAFTALDQAGVPWRSVYDCNTLEGIRTAVRSGLAIAAIPEEDCPD 236 Query: 246 DLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQ 292 DL L P LP + ++++E +++Q + + N Q Sbjct: 237 DLLKLQH----PRLPQLPRVHGRFETAHSEPPVIVHQLLTTLRNALQ 279 >UniRef50_A2WDL9 Transcriptional regulator n=2 Tax=Burkholderia RepID=A2WDL9_9BURK Length = 274 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 79/149 (53%), Gaps = 2/149 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDLD +R FV VADL +F AA A+ TQSAVS +++RLE VGK L AR R L Sbjct: 4 LDLDAVRAFVLVADLASFTRAADALGITQSAVSLKLKRLEAHVGKPLLARTPRVVKLAAD 63 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L AR +L +D A ++ + L++G S+ A LP LL + P L+L Sbjct: 64 GENFLPAARALLDAHDAALGAISAGTHR--LSLGVSEHVAVPDLPALLTSLHRQDPGLSL 121 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPS 159 ++ + +A + + + +D + H P Sbjct: 122 EMHLGMSANLLAQYDERRLDAAIVRHEPG 150 >UniRef50_Q1IRM1 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRM1_ACIBL Length = 302 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 47/147 (31%), Positives = 82/147 (55%), Gaps = 2/147 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D D L TF+ VA L F+ A V R+QSAVS Q+++LEQ G+ LF R G+ L+ Sbjct: 1 MDFDQLLTFLEVAKLGNFSRAGEKVYRSQSAVSAQIRQLEQEYGERLFDRSGKIVRLSPA 60 Query: 71 GIQLLGYARKILRFNDEACSSL--MFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LL YA++++ +E+ ++ +GVL+IGA++ + +LP + +P++ Sbjct: 61 GEVLLEYAQRMVALRNESLRAVADQGETPRGVLSIGANEATCLYVLPDIFTEYCQQFPQV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTT 155 + V + + + +E +DL + T Sbjct: 121 QITVYRNFSRKILQAVEDGVIDLGIAT 147 >UniRef50_Q1J2L5 Transcriptional regulator, LysR family n=2 Tax=Deinococci RepID=Q1J2L5_DEIGD Length = 299 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 77/242 (31%), Positives = 110/242 (45%), Gaps = 15/242 (6%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 L+ + L TF VA L + +AAA + TQ AVS Q++ L VG+ LF RH LT Sbjct: 2 LNPEHLLTFARVARLGSLSAAAEELYLTQPAVSHQLKLLTHAVGEPLFRRHRTGVHLTAA 61 Query: 71 GIQLLGYARKILRFNDEACSSLM-FSNLQ-GVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LL +A+ + R + A + L+ GVL++ AS A +LP +L S YP++ Sbjct: 62 GEGLLPHAQALARALEGAQHYVQELRGLERGVLSVAASSTIAAALLPRVLTAFHSQYPEV 121 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPS---------AFK--ALNLRTSPTHWYCAA 177 VR + + L+S +V+L + P AF L L +PTH A Sbjct: 122 TFQVRQGNTREVLDALQSGQVELALIEGPPGPLGPHLQARAFGEDELILVIAPTHPLAQA 181 Query: 178 EYILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA 237 LQ +PLV + S R++ L A + R AV+ AV GLG Sbjct: 182 G--LQGVATLPLVWREHGSGTREVAEQALAGAGLQTRTVLELPGTEAVKEAVMGGLGAAF 239 Query: 238 RP 239 P Sbjct: 240 LP 241 >UniRef50_C1A9Z7 LysR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9Z7_GEMAT Length = 296 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 4/146 (2%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D+ LLR F+ VAD F+ AA + Q ++S Q+QRLEQ +G LF RHGR LT+ Sbjct: 1 MDITLLRAFLEVADAGAFSRAARRIGIAQPSLSLQIQRLEQQLGTTLFERHGRGVALTDV 60 Query: 71 GIQLLGYARKI---LRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 G L AR+I +R +EA + G +T+GA A +LP L R+ +P Sbjct: 61 GKGLYPRARRIVDDVRAAEEAVRREVAEGF-GSITVGAIPTIAPYVLPAALERLQHRHPG 119 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMV 153 + +R +A + ++L +D+ + Sbjct: 120 ARVVLREDYSAVLVDLLREGAIDVAI 145 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P52662 HTH-type transcriptional regulator pecT n=151 Ta... 346 5e-94 UniRef50_C5BE75 HTH-type transcriptional regulator PecT n=26 Tax... 333 7e-90 UniRef50_C1DFD4 Transcriptional regulator, LysR family n=4 Tax=P... 311 2e-83 UniRef50_C0QAW4 HTH-type transcriptional regulator (LysR family ... 310 4e-83 UniRef50_C8X2B4 Transcriptional regulator, LysR family n=1 Tax=D... 298 2e-79 UniRef50_Q4K8T2 Transcriptional regulator, LysR family n=16 Tax=... 297 4e-79 UniRef50_B9K1U5 Transcriptional regulator LysR family n=59 Tax=A... 295 1e-78 UniRef50_C6BGY1 Transcriptional regulator, LysR family n=2 Tax=R... 295 1e-78 UniRef50_C7C7Z1 Transcriptional regulator, LysR family n=4 Tax=A... 293 6e-78 UniRef50_B1LTB4 Transcriptional regulator, LysR family n=4 Tax=A... 292 1e-77 UniRef50_A6FDC4 Putative uncharacterized protein n=1 Tax=Moritel... 291 1e-77 UniRef50_A3JCT6 Transcriptional regulator, LysR family protein n... 290 5e-77 UniRef50_Q4ZQB6 Regulatory protein, LysR:LysR, substrate-binding... 288 1e-76 UniRef50_Q07TP5 Transcriptional regulator, LysR family n=10 Tax=... 288 2e-76 UniRef50_A0NUY3 Transcriptional regulator n=1 Tax=Labrenzia aggr... 287 3e-76 UniRef50_Q1R159 Transcriptional regulator, LysR family n=3 Tax=P... 287 3e-76 UniRef50_B0FL86 Putative LysR family transcriptional regulator n... 284 2e-75 UniRef50_A1WQD6 Transcriptional regulator, LysR family n=12 Tax=... 283 6e-75 UniRef50_Q390C5 Transcriptional regulator, LysR family n=7 Tax=B... 282 8e-75 UniRef50_B7L193 Transcriptional regulator, LysR family n=3 Tax=R... 280 3e-74 UniRef50_Q7WCR5 Probable LysR-family transcriptional regulator n... 280 4e-74 UniRef50_A9BYU9 Transcriptional regulator, LysR family n=22 Tax=... 279 7e-74 UniRef50_Q07MM7 Transcriptional regulator, LysR family n=1 Tax=R... 279 9e-74 UniRef50_B9JGF1 Transcriptional regulator protein n=57 Tax=Rhizo... 278 1e-73 UniRef50_Q2SFI4 Transcriptional regulator n=1 Tax=Hahella chejue... 278 1e-73 UniRef50_A3YDA6 Transcriptional regulatory protein n=1 Tax=Marin... 277 3e-73 UniRef50_Q0G3C9 Transcriptional regulator, LysR family protein n... 277 4e-73 UniRef50_Q0FXE0 Probable transcriptional regulator n=1 Tax=Fulvi... 276 6e-73 UniRef50_A3YH31 Transcriptional regulator, LysR family protein n... 276 6e-73 UniRef50_Q98HR2 Transcriptional regulator n=1 Tax=Mesorhizobium ... 276 7e-73 UniRef50_B1J9W8 Transcriptional regulator, LysR family n=38 Tax=... 275 1e-72 UniRef50_B3QIV6 Transcriptional regulator, LysR family n=4 Tax=R... 275 2e-72 UniRef50_C5BWR0 Transcriptional regulator, LysR family n=1 Tax=B... 275 2e-72 UniRef50_Q0K9T5 Transcriptional regulator, LysR family n=2 Tax=B... 274 3e-72 UniRef50_C5B683 Transcriptional regulator, LysR family n=6 Tax=M... 273 7e-72 UniRef50_Q7W0I5 Probable LysR-family transcriptional regulator n... 273 7e-72 UniRef50_B6R8G3 Transcriptional regulator n=2 Tax=Rhodobacterace... 272 9e-72 UniRef50_A3Y8R3 Putative uncharacterized protein n=1 Tax=Marinom... 272 1e-71 UniRef50_C6BUP0 Transcriptional regulator, LysR family n=1 Tax=D... 271 2e-71 UniRef50_A9WT18 Transcriptional regulator, LysR family n=8 Tax=A... 271 2e-71 UniRef50_B2IEY6 Transcriptional regulator, LysR family n=1 Tax=B... 271 3e-71 UniRef50_P16931 HTH-type transcriptional regulator dgdR n=16 Tax... 271 3e-71 UniRef50_B8H5P5 Transcriptional regulator, LysR family protein n... 269 7e-71 UniRef50_A6WG79 Transcriptional regulator, LysR family n=2 Tax=A... 267 3e-70 UniRef50_Q28WA0 Transcriptional regulator, LysR family n=1 Tax=J... 267 3e-70 UniRef50_A9IU06 Transcriptional regulator, LysR-family n=23 Tax=... 267 4e-70 UniRef50_Q1QUX8 Transcriptional regulator, LysR family n=1 Tax=C... 266 5e-70 UniRef50_UPI000197C29B LysR family transcriptional regulator n=1... 266 5e-70 UniRef50_C1SL97 Transcriptional regulator, COG0583 n=1 Tax=Denit... 266 1e-69 UniRef50_A3VR51 Probable transcriptional regulator n=1 Tax=Parvu... 265 1e-69 UniRef50_C3KKD9 Putative LysR family transcriptional regulator n... 265 1e-69 UniRef50_Q13P59 Transcriptional regulator, LysR family n=8 Tax=P... 265 1e-69 UniRef50_Q1YP17 Transcriptional regulator, LysR family protein n... 265 2e-69 UniRef50_A5ED63 Transcriptional regulator, LysR family n=1 Tax=B... 264 3e-69 UniRef50_B1YYS6 Transcriptional regulator, LysR family n=41 Tax=... 263 6e-69 UniRef50_B2Q7A1 Putative uncharacterized protein n=1 Tax=Provide... 263 7e-69 UniRef50_A6UCU7 Transcriptional regulator, LysR family n=12 Tax=... 262 9e-69 UniRef50_UPI0001AEBA54 LysR family transcriptional regulator n=1... 262 1e-68 UniRef50_A4XSC8 Transcriptional regulator, LysR family n=7 Tax=P... 262 1e-68 UniRef50_A1B7H3 Transcriptional regulator, LysR family n=1 Tax=P... 262 1e-68 UniRef50_A5IA94 Transcriptional regulator, LysR family n=6 Tax=B... 262 1e-68 UniRef50_Q0B2N7 Transcriptional regulator, LysR family n=9 Tax=B... 261 2e-68 UniRef50_A8LQJ4 HTH-type transcriptional regulator n=5 Tax=Rhodo... 261 2e-68 UniRef50_A6W298 Transcriptional regulator, LysR family n=2 Tax=P... 261 2e-68 UniRef50_A3YEV8 Putative uncharacterized protein n=1 Tax=Marinom... 261 2e-68 UniRef50_Q2C715 Transcriptional regulator n=2 Tax=Photobacterium... 261 3e-68 UniRef50_C5CP23 Transcriptional regulator, LysR family n=4 Tax=P... 261 3e-68 UniRef50_A4YNE0 Putative transriptional regulatory protein, LysR... 259 6e-68 UniRef50_B1KPF3 Transcriptional regulator, LysR family n=2 Tax=G... 259 1e-67 UniRef50_C5A914 Regulatory protein n=2 Tax=Burkholderia RepID=C5... 259 1e-67 UniRef50_B2JVD1 Transcriptional regulator, LysR family n=1 Tax=B... 258 1e-67 UniRef50_B1LS77 Transcriptional regulator, LysR family n=2 Tax=P... 258 1e-67 UniRef50_A9DC03 Transcriptional regulator, LysR family protein n... 258 2e-67 UniRef50_A8TVM4 Transcriptional regulator, LysR family protein n... 257 3e-67 UniRef50_A0NXC5 Transcriptional regulator, LysR family protein n... 257 5e-67 UniRef50_Q2BIB7 Probable transcription regulator protein n=1 Tax... 256 5e-67 UniRef50_A4TW42 LysR-family transcriptional regulator n=1 Tax=Ma... 256 7e-67 UniRef50_A0NRR7 Transcriptional regulator, LysR family protein n... 256 8e-67 UniRef50_B4EPV1 LysR family regulatory protein n=7 Tax=Burkholde... 255 1e-66 UniRef50_Q5FRD9 Transcriptional regulator, LysR family n=1 Tax=G... 255 1e-66 UniRef50_Q7W0V6 Putative lysR-family transcriptional regulator n... 255 2e-66 UniRef50_C5CZ98 Transcriptional regulator, LysR family n=6 Tax=P... 254 2e-66 UniRef50_Q317K8 Transcriptional regulator, LysR family n=1 Tax=D... 254 2e-66 UniRef50_A6VRV6 Transcriptional regulator, LysR family n=1 Tax=M... 254 2e-66 UniRef50_B9JX79 Transcriptional regulator LysR family n=1 Tax=Ag... 254 3e-66 UniRef50_Q167A0 Transcriptional regulator, LysR family, putative... 254 3e-66 UniRef50_B9JHY5 Transcriptional regulator protein n=2 Tax=Agroba... 254 4e-66 UniRef50_A9GYT7 Transcriptional regulator n=4 Tax=Rhodobacterace... 253 5e-66 UniRef50_D0ZAY7 Transcriptional regulator, LysR family n=3 Tax=E... 253 8e-66 UniRef50_B9R5T3 LysR substrate binding domain protein n=1 Tax=La... 253 8e-66 UniRef50_Q393B8 Transcriptional regulator, LysR family n=2 Tax=P... 252 1e-65 UniRef50_A8ILZ3 Transcriptional regulator n=2 Tax=Xanthobacterac... 252 2e-65 UniRef50_Q13JW6 Transcriptional regulator, LysR family n=5 Tax=P... 251 2e-65 UniRef50_C4X8P7 NADH dehydrogenase transcriptional regulator n=9... 251 2e-65 UniRef50_Q141J0 Transcriptional regulator, LysR family n=7 Tax=B... 251 2e-65 UniRef50_Q3JTX1 Transcriptional regulator, LysR family n=37 Tax=... 251 2e-65 UniRef50_C1DJQ4 LysR family transcriptional regulator protein n=... 250 4e-65 UniRef50_A9BWM0 Transcriptional regulator, LysR family n=6 Tax=P... 250 5e-65 UniRef50_Q0BQ99 Transcriptional regulators, LysR family n=1 Tax=... 249 1e-64 UniRef50_Q1ZUY1 Transcriptional regulator n=3 Tax=Vibrionaceae R... 248 1e-64 UniRef50_B5ZG57 Transcriptional regulator, LysR family n=2 Tax=G... 248 2e-64 UniRef50_B2IKY9 Transcriptional regulator, LysR family n=1 Tax=B... 248 2e-64 UniRef50_A1WMH7 Transcriptional regulator, LysR family n=1 Tax=V... 248 2e-64 UniRef50_B5WKB1 Transcriptional regulator, LysR family n=4 Tax=P... 248 3e-64 UniRef50_B2II45 Transcriptional regulator, LysR family n=1 Tax=B... 246 5e-64 UniRef50_Q13GF3 Transcriptional regulator, LysR family n=1 Tax=B... 246 5e-64 UniRef50_Q5QVA7 Transcriptional regulator, LysR family n=2 Tax=I... 246 7e-64 UniRef50_A0KR40 Transcriptional regulator n=5 Tax=Gammaproteobac... 246 1e-63 UniRef50_C0Z518 Transcriptional regulator n=3 Tax=Paenibacillace... 245 1e-63 UniRef50_Q1LFN3 Transcriptional regulator, LysR family n=15 Tax=... 244 2e-63 UniRef50_A4WYH8 Transcriptional regulator n=11 Tax=Alphaproteoba... 244 2e-63 UniRef50_B0UBR3 Transcriptional regulator, LysR family n=1 Tax=M... 244 2e-63 UniRef50_A1B0T7 Transcriptional regulator, LysR family n=1 Tax=P... 244 3e-63 UniRef50_Q11NC7 Transcriptional regulator, LysR family n=3 Tax=P... 244 3e-63 UniRef50_Q7MCP0 Transcriptional regulator n=17 Tax=Vibrionales R... 244 3e-63 UniRef50_Q2SMF3 Transcriptional regulator n=1 Tax=Hahella chejue... 243 5e-63 UniRef50_A2SCP1 Transcriptional regulator, LysR family n=1 Tax=M... 243 5e-63 UniRef50_B9Z2V3 Transcriptional regulator, LysR family n=1 Tax=L... 243 5e-63 UniRef50_Q1QTI0 Transcriptional regulator, LysR family n=3 Tax=P... 243 6e-63 UniRef50_A1S908 Putative LysR-family transcriptional regulator n... 243 8e-63 UniRef50_B4E8W5 LysR family regulatory protein n=25 Tax=Burkhold... 242 1e-62 UniRef50_UPI0001B5968A HTH-type transcriptional regulator pecT n... 242 1e-62 UniRef50_Q3IFV7 Putative bacterial regulatory protein LysR Famil... 242 1e-62 UniRef50_B7KZZ4 Transcriptional regulator, LysR family n=11 Tax=... 241 2e-62 UniRef50_Q48I21 Transcriptional regulator, LysR family n=4 Tax=P... 241 2e-62 UniRef50_D0RZH8 Transcriptional regulator n=1 Tax=Acinetobacter ... 241 3e-62 UniRef50_A3XB80 Transcriptional regulatory protein, LysR family ... 241 3e-62 UniRef50_D0IY48 Transcriptional regulator, LysR family n=22 Tax=... 241 3e-62 UniRef50_B9YZG6 Transcriptional regulator, LysR family n=1 Tax=L... 240 4e-62 UniRef50_A4SIM7 Transcriptional regulator, LysR family n=3 Tax=G... 240 4e-62 UniRef50_A3JDH1 Probable transcriptional regulator n=1 Tax=Marin... 240 5e-62 UniRef50_Q3J596 Transcriptional regulator, LysR family n=37 Tax=... 239 6e-62 UniRef50_C6AY75 Transcriptional regulator, LysR family n=3 Tax=P... 239 8e-62 UniRef50_A6UJN8 Transcriptional regulator, LysR family n=5 Tax=A... 239 8e-62 UniRef50_D1RXQ6 Transcriptional regulatory protein n=1 Tax=Serra... 239 1e-61 UniRef50_C5CN69 Transcriptional regulator, LysR family n=1 Tax=V... 238 2e-61 UniRef50_D2C3C2 Transcriptional regulator, LysR family n=1 Tax=D... 238 2e-61 UniRef50_A6LQS5 Transcriptional regulator, LysR family n=5 Tax=C... 238 2e-61 UniRef50_A5N491 Transcriptional regulator n=2 Tax=Clostridium kl... 238 3e-61 UniRef50_A8G7X5 Transcriptional regulator, LysR family n=1 Tax=S... 236 7e-61 UniRef50_A0NS29 Transcriptional regulator, LysR family protein n... 234 2e-60 UniRef50_A5VE27 Transcriptional regulator, LysR family n=1 Tax=S... 234 4e-60 UniRef50_B8CHE2 Regulatory protein, LysR:LysR, substrate-binding... 233 6e-60 UniRef50_Q4KF30 Transcriptional regulator, LysR family n=5 Tax=P... 233 9e-60 UniRef50_A1WVW1 Transcriptional regulator, LysR family n=11 Tax=... 233 9e-60 UniRef50_C8Q8U4 Transcriptional regulator, LysR family n=1 Tax=P... 232 1e-59 UniRef50_C3BJ72 YwqM (Probable transcriptional regulator YwqM) n... 231 2e-59 UniRef50_A6VSC2 Transcriptional regulator, LysR family n=1 Tax=M... 231 3e-59 UniRef50_A0B0Y3 Transcriptional regulator, LysR family n=4 Tax=B... 231 3e-59 UniRef50_Q1LIS5 Transcriptional regulator, LysR family n=35 Tax=... 230 4e-59 UniRef50_B8IHA3 Transcriptional regulator, LysR family n=2 Tax=M... 230 5e-59 UniRef50_B6FPK4 Putative uncharacterized protein n=1 Tax=Clostri... 230 6e-59 UniRef50_B9Y467 Putative uncharacterized protein n=1 Tax=Holdema... 229 7e-59 UniRef50_C6Q178 Transcriptional regulator, LysR family n=1 Tax=C... 229 8e-59 UniRef50_A6UAC5 Transcriptional regulator, LysR family n=5 Tax=R... 229 9e-59 UniRef50_Q2RHB2 Transcriptional regulator, LysR family n=1 Tax=M... 229 1e-58 UniRef50_C7HXZ5 Transcriptional regulator, LysR family n=1 Tax=T... 229 1e-58 UniRef50_UPI00016C47B2 transcriptional regulator, LysR family pr... 229 1e-58 UniRef50_C6IVL6 Transcriptional regulator YwqM n=1 Tax=Paenibaci... 228 2e-58 UniRef50_C0CUF5 Putative uncharacterized protein n=1 Tax=Clostri... 228 3e-58 UniRef50_Q13GY4 Transcriptional regulator, LysR family n=1 Tax=B... 228 3e-58 UniRef50_B7GI02 Transcriptional regulator, LysR family n=2 Tax=B... 227 4e-58 UniRef50_A9CFW9 Transcriptional regulator, LysR family n=5 Tax=P... 227 4e-58 UniRef50_A5MZU7 Predicted transcriptional regulator n=3 Tax=Clos... 227 4e-58 UniRef50_Q1ZA42 Putative uncharacterized protein n=2 Tax=Bacteri... 227 4e-58 UniRef50_B1KU62 Transcriptional regulator, LysR family n=10 Tax=... 227 5e-58 UniRef50_D2LGY9 Transcriptional regulator, LysR family n=1 Tax=R... 226 5e-58 UniRef50_A4J1K6 Transcriptional regulator, LysR family n=1 Tax=D... 226 6e-58 UniRef50_Q1IRZ3 Transcriptional regulator, LysR family n=1 Tax=C... 226 7e-58 UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax... 226 8e-58 UniRef50_P96725 Uncharacterized HTH-type transcriptional regulat... 226 1e-57 UniRef50_UPI0001745DD5 transcriptional regulator, LysR family pr... 225 1e-57 UniRef50_B6R8G5 Transcriptional regulator, LysR family n=1 Tax=P... 225 1e-57 UniRef50_C0F0J2 Putative uncharacterized protein n=1 Tax=Eubacte... 225 2e-57 UniRef50_B8DKN9 Transcriptional regulator, LysR family n=4 Tax=P... 225 2e-57 UniRef50_B1MM13 Putative LysR-family transcriptional regulator n... 224 2e-57 UniRef50_A5N2N1 Predicted transcriptional regulator n=3 Tax=Clos... 224 2e-57 UniRef50_D1RYM9 Transcriptional regulatory protein n=1 Tax=Serra... 224 4e-57 UniRef50_Q15PU3 Transcriptional regulator, LysR family n=4 Tax=A... 223 5e-57 UniRef50_B7WU46 Transcriptional regulator, LysR family n=1 Tax=C... 223 9e-57 UniRef50_A8RPQ8 Putative uncharacterized protein n=2 Tax=Clostri... 223 9e-57 UniRef50_P20668 HTH-type transcriptional regulator gltC n=17 Tax... 222 1e-56 UniRef50_B0N992 Putative uncharacterized protein n=2 Tax=Clostri... 222 1e-56 UniRef50_UPI0001A44853 LysR, substrate-binding protein n=2 Tax=P... 222 2e-56 UniRef50_Q21IY2 Transcriptional regulator, LysR family n=2 Tax=G... 222 2e-56 UniRef50_B5YJV7 Transcriptional regulator n=1 Tax=Thermodesulfov... 221 2e-56 UniRef50_A1B0X3 Transcriptional regulator, LysR family n=11 Tax=... 221 2e-56 UniRef50_A9WIA6 LysR substrate-binding n=4 Tax=Chloroflexaceae R... 221 2e-56 UniRef50_Q5X4A2 Hydrogen peroxide-inducible genes activator n=4 ... 221 2e-56 UniRef50_A5V9A5 Transcriptional regulator, LysR family n=3 Tax=A... 221 2e-56 UniRef50_A9KJB0 Transcriptional regulator, LysR family n=4 Tax=C... 221 4e-56 UniRef50_C8Q3I4 Transcriptional regulator, LysR family n=1 Tax=P... 220 4e-56 UniRef50_C9LCS7 Putative transcriptional regulator n=1 Tax=Blaut... 220 5e-56 UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=... 220 6e-56 UniRef50_A8GAF5 Transcriptional regulator, LysR family n=2 Tax=S... 219 8e-56 UniRef50_B4E965 LysR family regulatory protein n=19 Tax=Proteoba... 219 1e-55 UniRef50_A4A328 Transcriptional regulator, lysr family protein n... 219 1e-55 UniRef50_UPI000178A79D transcriptional regulator, LysR family n=... 219 1e-55 UniRef50_O32186 Uncharacterized HTH-type transcriptional regulat... 219 1e-55 UniRef50_A6UC84 Transcriptional regulator, LysR family n=5 Tax=A... 219 1e-55 UniRef50_C1F961 Transcriptional regulator, LysR family n=1 Tax=A... 218 1e-55 UniRef50_C7I0K1 Transcriptional regulator, LysR family n=1 Tax=T... 218 2e-55 UniRef50_C0Z9T7 Transcriptional regulator n=1 Tax=Brevibacillus ... 218 2e-55 UniRef50_B1Y5W5 Transcriptional regulator, LysR family n=2 Tax=B... 218 2e-55 UniRef50_B2JU37 Transcriptional regulator, LysR family n=1 Tax=B... 217 4e-55 UniRef50_P0ACQ6 Hydrogen peroxide-inducible genes activator n=27... 217 4e-55 UniRef50_Q130S5 Transcriptional regulator, LysR family n=1 Tax=R... 216 6e-55 UniRef50_C6D4H5 Transcriptional regulator, LysR family n=4 Tax=B... 216 6e-55 UniRef50_Q4ZVH5 Regulatory protein, LysR:LysR, substrate-binding... 216 6e-55 UniRef50_B4EHW5 LysR family regulatory protein n=20 Tax=Proteoba... 216 7e-55 UniRef50_A4G228 Transcriptional regulatory protein, LysR family ... 216 1e-54 UniRef50_Q67PU0 LysR family transcriptional regulator n=1 Tax=Sy... 215 2e-54 UniRef50_A0LNI4 Transcriptional regulator, LysR family n=4 Tax=D... 215 2e-54 UniRef50_C6WIS4 Transcriptional regulator, LysR family n=1 Tax=A... 215 2e-54 UniRef50_C8W3M6 Transcriptional regulator, LysR family n=1 Tax=D... 214 2e-54 UniRef50_Q7P1J5 Probable transcriptional activator n=1 Tax=Chrom... 214 2e-54 UniRef50_B7KTE5 Transcriptional regulator, LysR family n=8 Tax=R... 214 3e-54 UniRef50_A6DK62 Hydrogen peroxide-inducible genes activator n=1 ... 213 5e-54 UniRef50_A0KPQ5 Transcriptional regulator n=1 Tax=Aeromonas hydr... 213 5e-54 UniRef50_A3YHF1 Putative uncharacterized protein n=1 Tax=Marinom... 213 5e-54 UniRef50_D1VDU1 Transcriptional regulator, LysR family n=2 Tax=A... 213 6e-54 UniRef50_A0LJJ0 Transcriptional regulator, LysR family n=2 Tax=B... 213 6e-54 UniRef50_D2B3J0 Transcriptional activator n=4 Tax=Actinomycetale... 213 8e-54 UniRef50_A5D2L1 Transcriptional regulator n=1 Tax=Pelotomaculum ... 213 9e-54 UniRef50_Q7W6A4 Putative LysR-family transcriptional regulator n... 212 1e-53 UniRef50_Q1IRM1 Transcriptional regulator, LysR family n=1 Tax=C... 211 2e-53 UniRef50_A5FXI2 Transcriptional regulator, LysR family n=22 Tax=... 211 3e-53 UniRef50_A3JF22 Putative LysR-family transcriptional regulator n... 210 4e-53 UniRef50_A2SKW7 Transcriptional regulator, LysR family n=24 Tax=... 210 5e-53 UniRef50_Q1LN85 Transcriptional regulator, LysR family n=1 Tax=C... 209 8e-53 Sequences not found previously or not previously below threshold: UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=C... 227 5e-58 UniRef50_C6P9X7 Transcriptional regulator, LysR family n=1 Tax=T... 223 1e-56 UniRef50_C3AM26 YwqM (Probable transcriptional regulator YwqM) n... 222 1e-56 UniRef50_A0RKW5 Transcriptional regulator, LysR family n=81 Tax=... 220 4e-56 UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=P... 220 5e-56 UniRef50_C6CWT6 Transcriptional regulator, LysR family n=5 Tax=B... 220 6e-56 UniRef50_C0ZGB6 Transcriptional regulator n=1 Tax=Brevibacillus ... 219 1e-55 UniRef50_Q65FY0 Probable transcriptional regulator YwqM n=1 Tax=... 218 2e-55 UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepI... 218 2e-55 UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Sy... 218 2e-55 UniRef50_A0L4T1 Transcriptional regulator, LysR family n=2 Tax=P... 217 3e-55 UniRef50_A6VV39 Transcriptional regulator, LysR family n=6 Tax=G... 216 6e-55 UniRef50_B8G0Z2 Transcriptional regulator, LysR family n=4 Tax=F... 216 1e-54 UniRef50_C3BMM7 Putative uncharacterized protein n=3 Tax=Bacillu... 215 2e-54 UniRef50_Q1K251 Transcriptional regulator, LysR family n=1 Tax=D... 215 2e-54 UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=G... 215 2e-54 UniRef50_A1VNR0 Transcriptional regulator, LysR family n=2 Tax=C... 213 1e-53 UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Ba... 211 3e-53 UniRef50_C7QKA9 Transcriptional regulator, LysR family n=1 Tax=C... 209 7e-53 UniRef50_Q1N6N4 Transcriptional regulator, LysR family protein n... 209 8e-53 >UniRef50_P52662 HTH-type transcriptional regulator pecT n=151 Tax=Enterobacteriaceae RepID=PECT_DICD3 Length = 316 Score = 346 bits (889), Expect = 5e-94, Method: Composition-based stats. Identities = 193/286 (67%), Positives = 236/286 (82%) Query: 1 MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR 60 M + +RP++NLDLDLLRTFVAVADLNTFAAAA AVCRTQSAVSQQMQRLEQL+GKELFAR Sbjct: 1 MTNTSRPVLNLDLDLLRTFVAVADLNTFAAAAVAVCRTQSAVSQQMQRLEQLIGKELFAR 60 Query: 61 HGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNR 120 HGRNKLLTEHGIQ LGYARKIL+FNDEAC+SLM+S++QG LTIGASD++ADTILPF+L R Sbjct: 61 HGRNKLLTEHGIQFLGYARKILQFNDEACASLMYSDIQGTLTIGASDDTADTILPFILQR 120 Query: 121 VSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYI 180 V++V+PKL++ V +KR+A M +ML+ ++DL++TT + LRTSPT WYC+A+Y Sbjct: 121 VTNVFPKLSIAVSIKRSAEMTDMLQQGKIDLVITTSNNDDLPHVLLRTSPTLWYCSADYQ 180 Query: 181 LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 Q GE + LV+LD+PSPFR + L L A IPW+++YVASTL AVRAAVKAGLG+T R V Sbjct: 181 YQPGETVSLVVLDEPSPFRALALDQLTAAGIPWKISYVASTLSAVRAAVKAGLGITVRSV 240 Query: 241 EMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 EMMSP+LRVL +GLP LPDT Y LC +P +NEL I+ A+ES Sbjct: 241 EMMSPELRVLGEEEGLPKLPDTRYYLCRNPDHDNELTNAIFSAIES 286 >UniRef50_C5BE75 HTH-type transcriptional regulator PecT n=26 Tax=Enterobacteriaceae RepID=C5BE75_EDWI9 Length = 333 Score = 333 bits (854), Expect = 7e-90, Method: Composition-based stats. Identities = 142/284 (50%), Positives = 202/284 (71%) Query: 1 MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR 60 MI RPI NL+LDLLRTF+AV + N+FAAAA +V RTQSA+SQQMQRLE L+GKELF R Sbjct: 28 MIQIQRPIPNLELDLLRTFIAVVEGNSFAAAAESVHRTQSAISQQMQRLESLIGKELFVR 87 Query: 61 HGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNR 120 GR K LTEHG+++LGYAR+IL NDEAC SLM+ ++ GVL IG+ D++A+TILP LL R Sbjct: 88 SGRGKSLTEHGVKMLGYARRILNLNDEACLSLMYDDVDGVLRIGSPDDTANTILPELLAR 147 Query: 121 VSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYI 180 S YP+L +++ VKR+ ++ E L++ E+D+ ++T + + LR+SP+ W+C Y Sbjct: 148 FSKAYPRLIIEIVVKRSPFLMEALKNDEIDMAISTTECTDYSGFILRSSPSLWFCGLNYK 207 Query: 181 LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 P+PLV LD+PS +R+M + L + IPWR+AY A+TL RAAV AGLGV AR + Sbjct: 208 FDADTPLPLVSLDEPSTYRNMAINHLERFGIPWRIAYTATTLSGARAAVAAGLGVMARSI 267 Query: 241 EMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 E+ DL +L +GLP LP+ ++ L ++ + A+V+++++ Sbjct: 268 ELFGDDLCILGESEGLPKLPNIKFNLYIRRNNPPKAAKVLFESL 311 >UniRef50_C1DFD4 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=C1DFD4_AZOVD Length = 317 Score = 311 bits (798), Expect = 2e-83, Method: Composition-based stats. Identities = 131/294 (44%), Positives = 187/294 (63%), Gaps = 4/294 (1%) Query: 1 MISANR----PIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKE 56 M++A R P LDL+LLRTF+AVAD +FA A + RTQS+V+QQMQRLEQ VG Sbjct: 8 MMNAERKAPMPSPTLDLELLRTFIAVADSQSFAEAGQRLARTQSSVTQQMQRLEQSVGVA 67 Query: 57 LFARHGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPF 116 LF + GR K LT+ G QLL AR++L ND+A +SL L GVL IG+ + ADTILP Sbjct: 68 LFQKQGRQKQLTDAGRQLLRRAREMLALNDDALNSLREEGLSGVLRIGSPHDVADTILPP 127 Query: 117 LLNRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCA 176 +L+ ++ P+L L++ V R+ ++ E L VD++++T + LRTSP W C+ Sbjct: 128 ILSHIARAAPRLRLEIDVGRSPFLMEDLHRGRVDMIISTREDPNLEGFPLRTSPVWWICS 187 Query: 177 AEYILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 A+Y+ P+PL+L+D+ S + L L + IPWR AY AS L V+AA++AGLG+T Sbjct: 188 AQYLHMPHAPLPLILIDESSIYHRYALEALEQHRIPWRQAYQASNLIGVKAAIRAGLGIT 247 Query: 237 ARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNP 290 AR +E++ PD+RVL +GLP LPD Y L P+++N + + Y + S+H Sbjct: 248 ARSMELLGPDMRVLGEKEGLPRLPDVTYHLWIRPNTHNPMVRKAYDLIRSHHEA 301 >UniRef50_C0QAW4 HTH-type transcriptional regulator (LysR family protein) n=2 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QAW4_DESAH Length = 282 Score = 310 bits (795), Expect = 4e-83, Method: Composition-based stats. Identities = 83/279 (29%), Positives = 154/279 (55%), Gaps = 2/279 (0%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +NL +D LRTFV++A+ F + R+QSAVS Q++RLE+ +GK+LF R G++ LT Sbjct: 1 MNLPIDYLRTFVSLAETKGFTRTGIQLNRSQSAVSMQIKRLEEEIGKKLFERIGKSVKLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L+ YA +I++ +D+A +L +L+G + G+ + +LP LL R +S YP + Sbjct: 61 PEGNILIKYAMRIIKEHDDAVRALSKPDLEGFIRFGSPEHYTTGVLPKLLARFASAYPDV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 +++R + + + E ++ E+D+ + T + P W A E+I+QK + +P Sbjct: 121 LVEMRCENSDKIKEAVDRGEIDIGICTQISDG--GQIISHDPVVWVAAPEFIMQKHKTLP 178 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 + + ++ FR + L K+ I +R+AYV+ ++ + AVKAG+ V + + +L+ Sbjct: 179 IAVFEEDCIFRSWAIEALEKSGIRYRIAYVSRSISGLLDAVKAGIAVAPIILSNVPAELK 238 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 + GLP LP + +L +E+ + + + + Sbjct: 239 TVDLEHGLPVLPVSNIVLHKTKKKTSEIIECFSEHIIRF 277 >UniRef50_C8X2B4 Transcriptional regulator, LysR family n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X2B4_DESRD Length = 309 Score = 298 bits (763), Expect = 2e-79, Method: Composition-based stats. Identities = 95/300 (31%), Positives = 145/300 (48%), Gaps = 4/300 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 ++D LLR FV VA+L +F AA + RTQSAVS Q++RLEQ +GK+L AR R LT Sbjct: 5 DIDSQLLRAFVTVAELGSFTRAATKLYRTQSAVSMQVRRLEQQLGKKLLARSSRQVTLTS 64 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +L YAR+ILR + + + + G + +G D+ A LP +L+ +YP + Sbjct: 65 LGEMVLPYARRILRIQEAMLNEVGQEQISGKVRLGMPDDYAAYFLPQVLSHFGLLYPNIQ 124 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 +++ + + + M+ S E+DL V T P +R W A+ + +P+PL Sbjct: 125 MEIFCELSRNLEPMVHSGEIDLAVVTRHPENASGRFVRREQLVWVEDAQAFAHEQQPLPL 184 Query: 190 VLLDDP-SPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L + FR L L A PWR+ + L +RA V AGL VT +SP +R Sbjct: 185 ALFPEGYCAFRLQALKALENAGTPWRIICESRGLAGIRATVSAGLAVTVVTRNTLSPTMR 244 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNP---WQYSPMSAPEGDDSL 305 ++ GLP LP+ E L +E V+ + +P P ++ Sbjct: 245 IIGPEQGLPDLPEIEIGLLTPGWGEDEATDVLASHILESLRHEGNGTATPEVEPLSNEPS 304 >UniRef50_Q4K8T2 Transcriptional regulator, LysR family n=16 Tax=Pseudomonas RepID=Q4K8T2_PSEF5 Length = 284 Score = 297 bits (761), Expect = 4e-79, Method: Composition-based stats. Identities = 92/278 (33%), Positives = 154/278 (55%), Gaps = 4/278 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQL-VGKELFARHGRNKLLT 68 ++D ++LRTFVA+AD F A V RTQSAVS QM+RLE+ + ++LF R GR LT Sbjct: 6 SIDTEVLRTFVAIADEGGFTRAGERVNRTQSAVSMQMKRLEEDVLQRQLFQRDGRQVKLT 65 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LLGYAR+IL+ + E ++L ++ G++ IG D+ LP +L+R + YP + Sbjct: 66 AEGQVLLGYARRILKLHSEVFNTLREPHMVGLVRIGTPDDYVMRFLPGILSRFAQSYPLI 125 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 ++V + + + L+ Q++DL + T P LR W A + + P+P Sbjct: 126 QIEVHCESSKQL---LQRQDLDLTIVTREPGNEIGQLLRKERFVWAVAQCFTPHEQTPLP 182 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L + + R L+ + +R+AY +S+L A+ A V AGL +TA+ +++PDLR Sbjct: 183 LAMFNSDCFCRLWACNALDAIGLDYRIAYNSSSLSAIMAVVSAGLAITAQLESLITPDLR 242 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 +L +GLP LP+ +L + + + + + + + + Sbjct: 243 ILGENEGLPELPEASIMLLRNLNQPSPITECLAEHIVE 280 >UniRef50_B9K1U5 Transcriptional regulator LysR family n=59 Tax=Alphaproteobacteria RepID=B9K1U5_AGRVS Length = 332 Score = 295 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 94/284 (33%), Positives = 157/284 (55%), Gaps = 3/284 (1%) Query: 1 MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR 60 M + + P LD D L+TF+A+ D +F AA V +TQSAVS QM+RLE+ +GK+LF + Sbjct: 13 MSAMSAP---LDTDQLQTFIAIVDTGSFTKAAGRVFKTQSAVSMQMRRLEERIGKQLFIK 69 Query: 61 HGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNR 120 GR LT G +LL YAR+I+R N EA ++ + L+G L IG D+ AD +P ++ R Sbjct: 70 DGRGNRLTAEGEKLLNYARRIVRLNSEAIAAFDDNRLEGTLRIGTPDDYADRYMPEIIGR 129 Query: 121 VSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYI 180 + +P + L + + ++ +AE + E+D+ + TH P+ ++ +RT P W +A + Sbjct: 130 FAKTHPNVELYIVCEPSSDLAEKMARGELDIALVTHNPATRQSDVMRTEPLCWVASANHP 189 Query: 181 LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 L+ P+PL + +R + + L+ +++ + + + V AAV AGL V+ P Sbjct: 190 LRDDAPVPLAVGRRDCNWRQLACSALDADGRDYQILFTSWSSTVVAAAVLAGLAVSVLPE 249 Query: 241 EMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 + ++VL +DG PPLP + + P + L I + Sbjct: 250 SALRTGMKVLGQLDGFPPLPPVQIGIMKRPGMSPSLMNAITDHI 293 >UniRef50_C6BGY1 Transcriptional regulator, LysR family n=2 Tax=Ralstonia pickettii RepID=C6BGY1_RALP1 Length = 289 Score = 295 bits (756), Expect = 1e-78, Method: Composition-based stats. Identities = 119/289 (41%), Positives = 183/289 (63%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + NLD+DLLRTFVA+A TFAAAAA V RTQSAV+QQMQRLE+ +G LF + GR+K + Sbjct: 1 MRNLDIDLLRTFVAIAHHETFAAAAARVGRTQSAVTQQMQRLEEEMGCALFEKRGRHKTM 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G++L+ YA KIL ND+A + + IG+ + AD+ILP LL R+S + P+ Sbjct: 61 TPDGVRLVAYAHKILALNDQAVQVIQTGGPIEKIRIGSPHDVADSILPNLLRRLSKLSPE 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 L +++ V R+ ++ + L + +DL ++T +AF + LRTSP W CA ++I P+ Sbjct: 121 LQMEINVGRSPFLMDALRDKTLDLAISTRYDNAFPGIKLRTSPMVWICAEDFIFNPAAPV 180 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PLV+ D+ S FR + + L+ IPWR +Y++ TL ++AA+ AGLGVTAR E++ ++ Sbjct: 181 PLVMADELSLFRQLSIECLDAHHIPWRTSYLSPTLTGIKAAISAGLGVTARTTELLDANM 240 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPM 296 RVL+ DGLP LP+ + L P+ + + + ++ + + + M Sbjct: 241 RVLTEADGLPRLPEVAFYLYVQPTCTSPVLRDLFDSTDRIATRFGPPFM 289 >UniRef50_C7C7Z1 Transcriptional regulator, LysR family n=4 Tax=Alphaproteobacteria RepID=C7C7Z1_METED Length = 322 Score = 293 bits (751), Expect = 6e-78, Method: Composition-based stats. Identities = 96/276 (34%), Positives = 145/276 (52%), Gaps = 2/276 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD DLLR F+ + + +F AA + RTQS VS Q++RLE +G+ +F R GR+ LT Sbjct: 25 LDFDLLRAFLHIVESGSFTRAAERIGRTQSTVSLQIKRLEDGLGRRVFDRDGRDLQLTPE 84 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LLGYAR+IL +E C+ +M + GV+ +G ++ A LP +L R + +P+++L Sbjct: 85 GEILLGYARQILSLGNEVCARIMEPEVDGVVRLGTPEDFATAHLPDVLARFARAHPRVSL 144 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAF-KALNLRTSPTHWYCAAEYILQKGEPIPL 189 +V ++ + DL++ P + + W + L G PIPL Sbjct: 145 EVHCDFTVHLLDGFSRGLYDLVLLKREPQGPGGGVGIWCEVLEWVASPGLALGSG-PIPL 203 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 VL P +R L L A +PWR+ Y + +L ++AAV AGLGVT P M+ L Sbjct: 204 VLAPAPDVYRKRALQALEAARLPWRIVYTSQSLLGLQAAVSAGLGVTVLPKGMIQSGLIR 263 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 +SG G P LP TE +L P S A ++ + + Sbjct: 264 VSGTYGFPALPATEVVLYRAPGSLPRAADLLAEHIM 299 >UniRef50_B1LTB4 Transcriptional regulator, LysR family n=4 Tax=Alphaproteobacteria RepID=B1LTB4_METRJ Length = 298 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 146/292 (50%), Gaps = 1/292 (0%) Query: 7 PIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKL 66 P + DLDLLRTFVA+ D +F AA+ + TQS VS Q++RLE + + LF R GR Sbjct: 4 PSLPFDLDLLRTFVAIVDNGSFTRAASRLGLTQSTVSLQIKRLEDGLTRRLFDRDGRELK 63 Query: 67 LTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYP 126 LT G LL YAR+IL+ E S ++ L GV+ +G ++ A T L +L + +P Sbjct: 64 LTSEGEVLLTYARQILKLGGEVLSKIVTPELTGVVRLGTPEDFATTHLSEVLACFARAHP 123 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFK-ALNLRTSPTHWYCAAEYILQKGE 185 ++AL+V + + D+++ P + W + + + Sbjct: 124 QVALEVNCDFTVNLLDDFSKGRYDMILFKREPQGPSGGTKVWREVLDWVASPRLVAEGNG 183 Query: 186 PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSP 245 PIPLVL P +R L+ L+ A WR+ Y + +L ++AAV+AGLGVT P EM+ Sbjct: 184 PIPLVLSPAPDVYRKRALSALDAAGRDWRIVYTSPSLAGLQAAVQAGLGVTVLPTEMVPE 243 Query: 246 DLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMS 297 D+ +S LP L DTE +L P + Q++ + + P + Sbjct: 244 DMVSVSARLRLPKLSDTEIVLYQAPGHVSPAVQLLSTTIVAALERRVAVPAT 295 >UniRef50_A6FDC4 Putative uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6FDC4_9GAMM Length = 293 Score = 291 bits (747), Expect = 1e-77, Method: Composition-based stats. Identities = 93/286 (32%), Positives = 147/286 (51%), Gaps = 1/286 (0%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +N D LR+FV VA+L +F+ ++ +CR QSA+SQQ+Q+LE+ V LF R+ LT Sbjct: 1 MNFDTSQLRSFVTVAELKSFSKSSERLCRVQSAISQQIQKLEKQVNAVLFIRNRNGVTLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G +LL YA K+L NDEA S+L + +G L +G SD A L +L S YP L Sbjct: 61 AQGERLLPYAVKMLSINDEAVSALCENQPKGWLRVGTSDTYATCFLKDILMSCSERYPGL 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 ++V + + M E ++D+++T PS + L P W C+ + K P+P Sbjct: 121 QIEVHCGYSESIWTMYEKGQLDIVLTQCCPSNINSETLHVEPLLWMCSRTSDVYKKTPVP 180 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L L R++ L L + + + + +S+ + AAV +G V+A + D + Sbjct: 181 LALFSKGCADREIALNGLVQVGKDYTMGFHSSSHAGILAAVSSGYYVSAILASTSNQDFK 240 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYS 294 VL+ DG PPL + E + Y+ ++N Q+ + Y W S Sbjct: 241 VLTETDGFPPLGNLEISMAYNDHADNSPTQMFACVVREYFR-WSRS 285 >UniRef50_A3JCT6 Transcriptional regulator, LysR family protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JCT6_9ALTE Length = 291 Score = 290 bits (743), Expect = 5e-77, Method: Composition-based stats. Identities = 114/280 (40%), Positives = 171/280 (61%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + +LDL LLRTFVA+ D FA AA V ++Q A+SQQM RLE + LF + GR K L Sbjct: 1 MRHLDLSLLRTFVAICDEENFAKAALKVHKSQPAISQQMGRLENELQVSLFIKCGRRKKL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G++L YAR++L +DE ++L L G + IGA + ADT+LP +L + P+ Sbjct: 61 TAAGVRLSEYARRLLALHDELWTTLDDQELIGPVRIGAPADIADTVLPSILQSFARANPR 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 L++ + V R+ + +ML + E+DL ++T + + L LR+SP W A++Y L EP+ Sbjct: 121 LSMAIHVGRSPDLMDMLFAGELDLTISTRKADGYPNLVLRSSPVVWIAASDYQLVSDEPL 180 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 LVL D+PS FR + L L + ++ +Y+A L ++AAV+AGLG+TAR +EM++P+ Sbjct: 181 SLVLADEPSIFRAIALEALTREQWDYKESYIAPNLAGIKAAVRAGLGITARSIEMVTPEF 240 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 RVL GLP LP + L S +E A+ +YQ + S Sbjct: 241 RVLGKHQGLPSLPIINFHLYLRNDSPSEAARKLYQLLASQ 280 >UniRef50_Q4ZQB6 Regulatory protein, LysR:LysR, substrate-binding n=5 Tax=Pseudomonas syringae group RepID=Q4ZQB6_PSEU2 Length = 296 Score = 288 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 95/282 (33%), Positives = 150/282 (53%), Gaps = 4/282 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLV-GKELFARHGRNKLLT 68 ++D +LLRTFVA+AD F A AV RTQSAVS QM+RLE+ V + LF R GR LT Sbjct: 18 SIDTELLRTFVAIADHGGFTRAGEAVNRTQSAVSMQMKRLEEDVVQRPLFQREGRVLNLT 77 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LLGYAR+IL+ + E ++L ++ GV+ IG+ D+ LP +L + + YP + Sbjct: 78 AEGQVLLGYARRILKLHSEVFNTLREPHMIGVVKIGSPDDYVMRFLPGILAQFAQAYPLV 137 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 ++V + + + L+ ++DL + T +P LR W A + + PIP Sbjct: 138 QVEVHCEPSDLL---LQRHDLDLTIVTRKPGTEIGTLLRQERLMWMEAVGFAPHEQTPIP 194 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L + + RD L+ +R+AY +S++ A+ A V AGL VTA+ + + DLR Sbjct: 195 LAMFNTHCFCRDWACNALDGMGRDYRIAYSSSSMAAITAVVSAGLAVTAQFQSLATADLR 254 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNP 290 +L + P LP +L P + + + + + + + P Sbjct: 255 ILGEAEQFPQLPTASIVLLRKPENPSPITECMADYIIAGFKP 296 >UniRef50_Q07TP5 Transcriptional regulator, LysR family n=10 Tax=Rhizobiales RepID=Q07TP5_RHOP5 Length = 305 Score = 288 bits (737), Expect = 2e-76, Method: Composition-based stats. Identities = 89/276 (32%), Positives = 139/276 (50%), Gaps = 1/276 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDLDLLR+FV+V D F A V RTQS VSQQ++RLE +G++L R G+ TE Sbjct: 20 LDLDLLRSFVSVVDSGGFTRAGERVHRTQSTVSQQIKRLEDDLGQQLLNRDGKTVTPTEA 79 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LL YAR++L +EA + + G + +G ++ A L LL R S P L L Sbjct: 80 GERLLSYARRLLSLAEEARDVVARPHQDGAVRLGIPEDFAAYRLTRLLARFSRARPGLRL 139 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYIL-QKGEPIPL 189 DVR ++ + +E ++DL + A+ + HW + + K + +PL Sbjct: 140 DVRADQSLNLTRDIERGDLDLALLKREAGGRSAIAVWPERVHWVNSRNHPCNAKADSVPL 199 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 + +R + + A W LAY +S+L ++AAV AGLG++ + D Sbjct: 200 IFFPSGCLYRSRAIHAIEAAGRRWHLAYSSSSLAGIQAAVAAGLGLSILSDMSIGTDHHK 259 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 L+ DG PP+ +TE L P ++ ++ + E Sbjct: 260 LTARDGFPPIDNTELALVAAPEASPATLRLADKLAE 295 >UniRef50_A0NUY3 Transcriptional regulator n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NUY3_9RHOB Length = 296 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 85/275 (30%), Positives = 151/275 (54%), Gaps = 1/275 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD+D LRTF+A+A+L +F A AV +TQSAVS QM+RLE+ VG+ +F + GR LTE+ Sbjct: 5 LDIDQLRTFLAIAELGSFTKAGEAVHKTQSAVSMQMRRLEERVGQPIFIKDGRQSRLTEN 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G++L+ +AR+++ NDE S+ G + +G D+ AD +LP +L + + P + + Sbjct: 65 GLRLVEFARRMIMLNDETLSAFNGQKEVGHVKLGVPDDYADRLLPQVLAAFNRLNPSIEV 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPS-AFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 V + + E + +D+ +TT + + + +R P +W A+++ + + L Sbjct: 125 QVECISSHRLTEAIREGTLDVAITTSQDTMDLRGEIIRREPLYWVTASQHSAHTQDVVRL 184 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 L +R + + L++A P+R++Y +S+ A+ AV+AGL VT P + +R+ Sbjct: 185 ALGPVTCGWRRLSMDALDRAGRPYRVSYTSSSAAALVGAVQAGLAVTVFPESAIRDGMRI 244 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 L DG P LP + L ++ + + + Sbjct: 245 LDEKDGFPTLPYCDIALLRSDTAREAMHDTLCNHL 279 >UniRef50_Q1R159 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=Q1R159_CHRSD Length = 299 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 151/291 (51%), Gaps = 3/291 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDL +L TFV V D F AAA A+ QS VS M+RLE G+ L R + + + Sbjct: 7 LDLVVLNTFVTVVDKGGFTAAADALYLAQSTVSAHMKRLEDTFGQPLLQRGRKTPVPSPA 66 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LL +AR++LR N A + L GV+ +G D+ LP L+ + YP + L Sbjct: 67 GERLLSHARQMLRQNALAWQDVSEQRLDGVVRLGIPDDYVVY-LPEALSEFEAQYPGVEL 125 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 V + + + + + +DL +TT +P + L PT W AA + Q+ P+PL Sbjct: 126 QVDCGLSVDLVQSVRAGSLDLAITTRQPKSPGGEVLCREPTVWAGAAGHDTQRRTPLPLA 185 Query: 191 LLDDP-SPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 + D FR+ LA L+ IPWR+AY +++L + AAV+AGL +T M+ LRV Sbjct: 186 VSKDGVCIFRERALAALDAMGIPWRIAYTSASLSGLTAAVRAGLAITVLTPSMLGAGLRV 245 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYS-PMSAP 299 + +GLP LP TE L P NE + + +++++ + P++A Sbjct: 246 IGSGEGLPELPMTEIALHRSPGRPNEATRQLALSLQTHIQARSATLPVTAA 296 >UniRef50_B0FL86 Putative LysR family transcriptional regulator n=1 Tax=Mesorhizobium sp. F28 RepID=B0FL86_9RHIZ Length = 361 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 91/299 (30%), Positives = 139/299 (46%), Gaps = 4/299 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + DLLRTFV VA+ F+ AA + TQS VS Q++RLE + R R+ LTE Sbjct: 58 FEPDLLRTFVMVAECGGFSRAAERLNSTQSTVSHQIKRLESQAARTFLNRTTRSLSLTED 117 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L+ YARK LR D+A L+G + + ASD+ A LP +L R V+P++ L Sbjct: 118 GEVLIDYARKFLRLADDAKQHFNSPRLKGHVRLAASDDFATYSLPEILGRFKRVHPEVRL 177 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 V V + + L+ E DL++ + W A + ++ +P+PL Sbjct: 178 TVDVGLSGNLVSRLDEGEFDLVLGKRSLGETDGELVSREKLVWVAAPDIVINPHQPLPLA 237 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 + P +R + LN A W + Y + +L +RAA AG+ VT ++PDL L Sbjct: 238 VYPKPCLYRSTAIEVLNAAGRSWNVVYTSPSLSGIRAAAIAGIAVTPLAANFVTPDLMCL 297 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYH----NPWQYSPMSAPEGDDSL 305 + LP LPD E+ L S A+ + + + PW + P++ Sbjct: 298 DPDEDLPELPDVEFALFRTRSVETPAARELAELLLRARPLGIFPWHHKPLTGEANSLPS 356 >UniRef50_A1WQD6 Transcriptional regulator, LysR family n=12 Tax=cellular organisms RepID=A1WQD6_VEREI Length = 292 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 121/284 (42%), Positives = 175/284 (61%), Gaps = 2/284 (0%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + LDL+LLR+F AV ++FAAAA + RTQSA++QQMQRL++ +G LF + GR K L Sbjct: 1 MPTLDLELLRSFAAVVSHHSFAAAAVHLGRTQSAITQQMQRLQEQIGHPLFVKQGRQKRL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 TE G +LL YAR +L NDEA +L +G L IGA + A+T+LP LL V+ P Sbjct: 61 TERGERLLNYARHMLALNDEALRNLRQGRFEGNLRIGAPHDVAETLLPSLLAEVARTAPL 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTH--RPSAFKALNLRTSPTHWYCAAEYILQKGE 185 L LD+ + R+ Y+ LES EVD++++ S F+ + LR SPT W CAA Y+ + Sbjct: 121 LQLDIHIGRSPYLMTSLESGEVDMIISNRADPQSQFEGVVLRNSPTVWLCAASYVHDPAK 180 Query: 186 PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSP 245 P+PL++ D PS FR + L+ A + W Y++S L ++AA++AGLGVTAR VE + Sbjct: 181 PVPLIMADGPSIFRRIGHEALDAAGVAWTPRYMSSGLVGIKAALRAGLGVTARGVEQLDA 240 Query: 246 DLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 LRVL DG+P LPD Y L N + + +++ ++ + Sbjct: 241 GLRVLDASDGMPRLPDLTYYLYVRSRVVNPVTRQVFETLKQHLR 284 >UniRef50_Q390C5 Transcriptional regulator, LysR family n=7 Tax=Burkholderia RepID=Q390C5_BURS3 Length = 323 Score = 282 bits (723), Expect = 8e-75, Method: Composition-based stats. Identities = 98/286 (34%), Positives = 148/286 (51%), Gaps = 4/286 (1%) Query: 3 SANRPII--NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR 60 NR + NLD+D LRT +A L + AA + R+QSAVSQQM++LE +G+ LF R Sbjct: 18 KKNRIMTLPNLDMDALRTLIAADRLGSLNRAADRIGRSQSAVSQQMRKLETQIGQPLFRR 77 Query: 61 HGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNR 120 GR + TE G +L YAR+IL NDEA ++ + ++G + G + A++ LP L + Sbjct: 78 QGRGLVPTEAGELMLSYARRILELNDEAVGAIRGAAIEGAVRFGLPGDFAESWLPVALGQ 137 Query: 121 VSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYI 180 +P + +D+ V N + + L+ E+D+++ R A +L T P W Sbjct: 138 FKRTHPGVRVDIVVDGNGALLDRLDGGELDIVLAMGRGHRADAEHLVTLPMAWIGPQGID 197 Query: 181 LQKGEPIP--LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 ++ +P L L P FR L+KA IPWRLAY +L ++ A V GLG++AR Sbjct: 198 VRPRAGVPLDLALYKPPCLFRKAGTDALDKAGIPWRLAYTTGSLQSLWAGVAGGLGISAR 257 Query: 239 PVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 + + P LR L DGLPPLP + L + + + Sbjct: 258 TMVGVPPALRQLGERDGLPPLPSVDVCLHAGEGDAPSALANLKRVV 303 >UniRef50_B7L193 Transcriptional regulator, LysR family n=3 Tax=Rhizobiales RepID=B7L193_METC4 Length = 293 Score = 280 bits (718), Expect = 3e-74, Method: Composition-based stats. Identities = 95/290 (32%), Positives = 150/290 (51%), Gaps = 1/290 (0%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + +LDL LLRTFVA+ D +A AV RTQSAV+ Q+ RLE +G+ +F R L Sbjct: 1 MSDLDLALLRTFVAIVDTGGVTSAGRAVGRTQSAVTHQIGRLEAQLGRPVFGPDRRRITL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G LL YAR +LR ++EA + + G +T+G D A +LP +L R S YP+ Sbjct: 61 TADGEILLEYARAMLRLSEEARARFAVPGVAGRVTLGTPDLYAAYLLPEVLGRFSRAYPE 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + + + +R+ Y+ L ++D+ + T +P + +RT P W + +PI Sbjct: 121 IEIQLHCRRSVYLHAELMRDKLDIAILTEQPDLHRGEAVRTEPLSWVAGRGGRPETDDPI 180 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL +L S +R L L A W + V+ T+ ++AAV A L V+ P MS + Sbjct: 181 PLAVLPAGSVYRQRALEALGAAGRRWTIRSVSDTIAGLQAAVFARLAVSVFPHCAMSGGM 240 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM-ESYHNPWQYSPM 296 R L DG+P LP+ + +L P+ ++ A+ + + N + P+ Sbjct: 241 RRLGEEDGMPRLPNIDLVLVRRPTGISDAAEHLAHYISRELRNAAAFRPV 290 >UniRef50_Q7WCR5 Probable LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7WCR5_BORBR Length = 307 Score = 280 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 105/287 (36%), Positives = 172/287 (59%), Gaps = 4/287 (1%) Query: 6 RPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNK 65 R + +LD+ LRT V +A +F+A A + +TQ A++ QM +LE +G LF + GR++ Sbjct: 10 RSVRHLDMQQLRTLVTIAQTGSFSATAEKLFKTQPAITHQMHQLEATLGTALFEKQGRSR 69 Query: 66 LLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVY 125 +LTE G ++L YA ++L NDE LQG L IG+ ++ +T+LP +L + S Sbjct: 70 VLTEDGQKMLKYASQVLALNDEVFRVFQER-LQGTLRIGSPHDAVETLLPSILRQASQAL 128 Query: 126 PKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGE 185 P+L +DV + R + E+L+ E+D+ ++ F+ L L+ SP W CAA+Y+ + + Sbjct: 129 PQLNIDVCIDRAPRLFELLQRGEIDMAISARFHQEFEGLILKRSPVVWLCAADYVHRPDK 188 Query: 186 PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSP 245 +PL+L D S +R+M LA L + I W + + L ++AA++AGLGVT R +++++P Sbjct: 189 ALPLILADGSSIYREMALAALEQHHIRWTVTRIVPDLVGIKAAIRAGLGVTPRSIDLLAP 248 Query: 246 DLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQ 292 D+R+L DGLPPLP+ Y L P +++ A+ QA E W+ Sbjct: 249 DMRMLDEADGLPPLPEMTYHLWIRPHADDSPAR---QAYEMLRQAWE 292 >UniRef50_A9BYU9 Transcriptional regulator, LysR family n=22 Tax=Proteobacteria RepID=A9BYU9_DELAS Length = 306 Score = 279 bits (715), Expect = 7e-74, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 152/292 (52%), Gaps = 6/292 (2%) Query: 6 RPII--NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGR 63 RP+ ++D LLR+F AVA+ +F AA V TQS VSQQ++RLE+ +G L R GR Sbjct: 13 RPMQPSSIDPTLLRSFCAVAETGSFTRAAQGVHLTQSTVSQQIRRLEEQMGCTLLDRSGR 72 Query: 64 NKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSS 123 + T G +LL YA++IL DEA L + VL IG ++ A L L ++ Sbjct: 73 HVECTLEGERLLAYAQRILALMDEAVEQLAGATEA-VLRIGVPEDFAGHALMPALGALAR 131 Query: 124 VYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQK 183 P+L L++ + + + L++ E+DL + R + + P W +A + Sbjct: 132 SQPQLRLELTSGLSQAIWQQLQAGELDLAIVKQRSGSTPGMARWPEPLAWIDSARHPCHG 191 Query: 184 GEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMM 243 +P+PLV+ +R + L+ A WRLAYV+++L ++ AAV+ GLG++ P ++ Sbjct: 192 MDPLPLVVFPQGGLYRSEMTHALDAAGRRWRLAYVSASLASLEAAVEQGLGISLLPRRLV 251 Query: 244 SPDLRVLSGVDGLPPLPDTEYLLCYD---PSSNNELAQVIYQAMESYHNPWQ 292 P R+L G+ G P+PD E L + LA+ + + E+ +P Sbjct: 252 GPGHRLLDGMAGFAPVPDVEVALHVRAPLSAPGRRLAERLSEVCEALLSPAA 303 >UniRef50_Q07MM7 Transcriptional regulator, LysR family n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07MM7_RHOP5 Length = 287 Score = 279 bits (714), Expect = 9e-74, Method: Composition-based stats. Identities = 93/282 (32%), Positives = 146/282 (51%), Gaps = 4/282 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 ++LDL+L+RTF+AV D F A + +TQS +S ++RLE++VG+ LF R GR+ +LT Sbjct: 1 MDLDLELVRTFLAVIDHGGFTRAGGRLHKTQSTISLHIRRLEEIVGRPLFDRQGRHAVLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 E G L YA ++ NDEA L + G++ +G ++ A LP L R ++ +P + Sbjct: 61 EQGEILRTYAEALVGLNDEALLKLRRPPVTGIVRLGLPEDFATRHLPLALRRFTATHPAI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 L+VR A + L + ++D ++ A + L P W A + +P+P Sbjct: 121 RLEVRSSLTAELMRDLGNGDLDFVLARRELDATEGQLLWREPLIWVGARGRLFSA-DPLP 179 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 LV+ +R VL + W + Y +S+L V+AAV AGLGVTA + PD Sbjct: 180 LVMFPHGCVYRPEVLRRMRSCPRAWEIVYTSSSLAGVQAAVSAGLGVTALAESTVLPDFA 239 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELA---QVIYQAMESY 287 VL +GLP LP T+ L N A + + +++ S Sbjct: 240 VLGAREGLPELPQTDIALFTGVGRNEAAAYLGEYLAESVRSL 281 >UniRef50_B9JGF1 Transcriptional regulator protein n=57 Tax=Rhizobiales RepID=B9JGF1_AGRRK Length = 348 Score = 278 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 94/287 (32%), Positives = 151/287 (52%), Gaps = 3/287 (1%) Query: 2 ISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARH 61 + RPI LD ++LRTFVA+A+ F+ AA AV RT SAVS Q+++LE+ +G LF R Sbjct: 52 VPFRRPIPLLDNEVLRTFVAIAETGNFSTAADAVFRTPSAVSMQIKKLEEQLGVTLFLRD 111 Query: 62 GRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRV 121 R+ LT+HG LL YAR IL ++EA S + L GV+ +GA D+ + +LP +L Sbjct: 112 ARSVSLTQHGEMLLSYARNILALSNEAVSRFIMPELSGVVRLGAPDDIGERLLPSILKSF 171 Query: 122 SSVYPKLALDVRVKRNAYMAEMLESQEVDLMVT--THRPSAFKALNLRTSPTHWYCAAEY 179 S YP + +DV V + + + +E Q +DL + RP + + T W A Sbjct: 172 SESYPSIMVDVVVDMSIQLKKRIEEQRLDLALINCATRPFPTEGEVIYTERLVWAGAKCG 231 Query: 180 ILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARP 239 + +P+P+ + +D +R LA L + P+R++Y+++ A RAA+ + L V P Sbjct: 232 TAYRRDPLPISIWEDGCIWRSEALAQLERHKRPYRVSYLSAHTMAQRAAIVSDLAVAPFP 291 Query: 240 VEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 + D+ +L +GLP L + L S + + ++ Sbjct: 292 RSYIGEDMEILGPNEGLPELTSFDIRLLTA-SQMTGPMKAVADSIRE 337 >UniRef50_Q2SFI4 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFI4_HAHCH Length = 296 Score = 278 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 94/300 (31%), Positives = 141/300 (47%), Gaps = 12/300 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 L DLL+TFVAVAD F A A+ R+Q A+S Q++RLE+LVG L R+ + T Sbjct: 4 LPTDLLQTFVAVADYGGFTQAGDALGRSQPAISLQIRRLEELVGATLLLRNNKALAPTPE 63 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G+ LL YAR IL N EA L L G L +G +E A + LP +L + S +P + L Sbjct: 64 GLILLQYARDILALNKEAMIKLSQPELAGCLRLGIPNEFASS-LPEVLGKFSQAHPNVTL 122 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSA-FKALNLRTSPTHWYCAAEYILQKGEPIPL 189 +V ++ + E S+E+DL+ H W + + P+PL Sbjct: 123 EVTCDLSSNLVERYRSKELDLVFALHTSLRTISPEEGWMEDLVWATSIHHTCHTRHPVPL 182 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 ++ +R ++ L+ IPWR+ Y ++ +RA V AGLGVT ++ LRV Sbjct: 183 IVAPRGCVYRHRIIEALDSMSIPWRIVYTCASFSGIRAGVLAGLGVTVLGKSIVPEGLRV 242 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPEGDDSLLIER 309 + D LP LP + L Y+ + Q + +AP D L ++ Sbjct: 243 VESSDYLPALPGVQMRLLYNREQTSPAVAGFVQFISR----------TAPVAGDGLSLDG 292 >UniRef50_A3YDA6 Transcriptional regulatory protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YDA6_9GAMM Length = 283 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 89/265 (33%), Positives = 143/265 (53%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L+LLRTF+AVA+ +F AA TQS VS Q++RLE+ +G+ LF R R+ LT+H Sbjct: 1 MNLELLRTFLAVAEGKSFTAATQKRFMTQSTVSHQIKRLEESLGQVLFVRTTRSCKLTDH 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L YARKI+ DE LQG +++ A ++ +L R + + P + L Sbjct: 61 GEILFTYARKIINLCDELDDKFSEKPLQGHVSLAAPEDYLSLPFSKILARFTRIQPDVEL 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 D+RV + + S E+DL V P + L W + ++ L + +PL Sbjct: 121 DIRVGLSETFRAQVTSGEIDLAVLAQIPPTGEGQPLYRDKLVWLASEDFHLGTHKSVPLA 180 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 L+ P +R +A L+K ++PW+LA + A+++AV +GL VT + + P ++VL Sbjct: 181 LVPSPCLYRKTAIAALDKQNMPWQLALNCHSHEAIKSAVISGLAVTVLTEKDLRPGMKVL 240 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNE 275 + DG P L ++E L + P +NE Sbjct: 241 TQKDGFPDLGESELSLHHAPHLSNE 265 >UniRef50_Q0G3C9 Transcriptional regulator, LysR family protein n=2 Tax=Aurantimonadaceae RepID=Q0G3C9_9RHIZ Length = 323 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 80/292 (27%), Positives = 146/292 (50%), Gaps = 3/292 (1%) Query: 12 DLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHG 71 DL+ LRTFVA+ D +F AA V +TQSAVS Q++RLE+ +G LF R+GR +T+ G Sbjct: 6 DLEQLRTFVAIVDAGSFTKAAEDVFKTQSAVSMQIRRLEERLGTRLFERNGRAIEVTDSG 65 Query: 72 IQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALD 131 +LL YAR++L + E S+ + +QG + IG D+ A+ LP +L R S P + L Sbjct: 66 QRLLSYARRMLTLSQETLSAFDENAMQGAVRIGLPDDYAERFLPEILARFSRSNPLVELS 125 Query: 132 VRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNL-RTSPTHWYCAAEYILQKGEPIPLV 190 + + ++ +A+ + +D+ + + + L++ R P H+ ++ + + +PL Sbjct: 126 IACEPSSNLADAIAKGRLDVALVSDCGTDGAKLDIVRHEPLHFVASSAHEAHLKDIVPLA 185 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 + +R + L +A + + + + + + +AV AGL + P + P +R+L Sbjct: 186 VGRADCKWRREGIEALERAGRRYNVLFSSWSAQVLISAVLAGLAIGVLPECALRPGMRIL 245 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPEGD 302 DG P L T + +++ + + + P +AP Sbjct: 246 GERDGFPKLNHTAIGVLRSANASGAIVTALVDHIRDSLA--NLVPANAPAAQ 295 >UniRef50_Q0FXE0 Probable transcriptional regulator n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FXE0_9RHIZ Length = 302 Score = 276 bits (708), Expect = 6e-73, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 151/290 (52%), Gaps = 4/290 (1%) Query: 3 SANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHG 62 ++ + LD+DLLRTFVA+ D +FAAAA V R+ SA+S Q++RLE G EL R Sbjct: 8 QSSAVMPLLDIDLLRTFVAIIDEGSFAAAANKVGRSPSAISMQVKRLEDTTGTELLRRDA 67 Query: 63 RNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVS 122 R+ LT G LLG+AR+ + N A +L L+G L +G D+ +T+LP +L R S Sbjct: 68 RSVRLTAEGETLLGFARQFMDLNRRAIGALGRPELEGQLHLGLPDDYGETVLPSMLRRFS 127 Query: 123 SVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPS---AFKALNLRTSPTHWYCAAEY 179 YP + +DV ++ + + ++D+ V + A A L T W A Sbjct: 128 ESYPSVVVDVTMQNTRETLALFDRGKLDVAVFSFDEDGGNAVGAECLFTDALVWVGAPGG 187 Query: 180 ILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARP 239 +P+PL + D+ +R LA L + + PWR+AY + P RAAV+AG+ + Sbjct: 188 TAHLHDPLPLAMWDESCVWRRSALAALERVERPWRVAYTCAHTPGQRAAVRAGIAIAPVS 247 Query: 240 VEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 D+R+L DGLPP+ D + + +E A+VI + ++ + Sbjct: 248 RIFAGDDVRILGEADGLPPMNDYSIGMKLRENP-SEQAKVIAHHLRTFFS 296 >UniRef50_A3YH31 Transcriptional regulator, LysR family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YH31_9GAMM Length = 287 Score = 276 bits (707), Expect = 6e-73, Method: Composition-based stats. Identities = 79/277 (28%), Positives = 137/277 (49%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + N+D DLLRTFVAV + N F++A+ + +TQS +SQ++ +LE ++G L R RN L Sbjct: 1 MKNIDSDLLRTFVAVYECNGFSSASECLNKTQSTISQRLLKLEDMIGCSLMQRTSRNVKL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G L YAR+IL+ + EA + L +G D+ A L +L YP Sbjct: 61 TPAGKDFLVYARQILKLHAEAIDVAKLAQKNTTLKVGVPDDYAQRFLTPVLRFFRETYPD 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 L +V + + + E E+D+ ++ + + P W + +Y++Q E I Sbjct: 121 LIPEVVCETSVRLIEKTMHGELDMALSIKHDNTIPGEFVCNEPLIWAASPDYLVQGREVI 180 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL + + FR + L K +PWR+A+ + + + +V +G VT ++ + Sbjct: 181 PLSVYPEGCIFRSNGIGALAKHSLPWRVAFTSQSPSGISVSVNSGDSVTITSKRLLPDNW 240 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 RVL+ +G P + E +L + P +N + + + Sbjct: 241 RVLTEEEGFPKIKSAELMLYHSPVFDNPFSSCFEEKL 277 >UniRef50_Q98HR2 Transcriptional regulator n=1 Tax=Mesorhizobium loti RepID=Q98HR2_RHILO Length = 285 Score = 276 bits (707), Expect = 7e-73, Method: Composition-based stats. Identities = 87/276 (31%), Positives = 147/276 (53%), Gaps = 1/276 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDL+LL+TFVAV + + + AA V R+QSAVS QMQRLE++VG +L R R Sbjct: 5 LDLNLLKTFVAVVESGSLSNAAPRVGRSQSAVSMQMQRLEEMVGNQLLVRGPRTVTPNAI 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L YAR++L+ +DEA +S+ G + +G D+ A +LP +L+R + +P + + Sbjct: 65 GEDFLIYARRLLKLSDEAWASVTRPKETGSVRLGVPDDYAAFLLPPVLSRFAEDHPLVTV 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 ++ +++ + + L +DL + T P +R W + ++ + +P+P+ Sbjct: 125 ELICEQSTALVKTLAEGRLDLAIVTRLPDQ-PLDVIRLERFVWVASPNHVAWQTDPLPVA 183 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 L + R VL L +AD +R Y +++L + A V+AGL V + P LR++ Sbjct: 184 LFEPGCAARMNVLQALGEADRSYRCTYSSASLLGLIAVVQAGLAVAGLAQRSVPPSLRII 243 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 G +GLP LPD E + +P S+ ++ + Sbjct: 244 GGNEGLPVLPDLEIGILRNPLSSTPAVDRLHDFLRR 279 >UniRef50_B1J9W8 Transcriptional regulator, LysR family n=38 Tax=Bacteria RepID=B1J9W8_PSEPW Length = 307 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 85/288 (29%), Positives = 153/288 (53%), Gaps = 5/288 (1%) Query: 2 ISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARH 61 + +NR + DLDLLR V VAD +F AAA + TQS +SQ+++RLE +VG L R Sbjct: 19 VKSNRAL--FDLDLLRAIVVVADCGSFTTAAARLHSTQSTISQKVRRLEDMVGHRLLVRG 76 Query: 62 GRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRV 121 R+ L T+ G LLGYAR +L ND+ +L + + + +G ++ L+ Sbjct: 77 NRDVLPTDAGQTLLGYARHMLALNDQMLEALAGAMVGVTVRLGVPEDFVGGRTTNALSAF 136 Query: 122 SSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYIL 181 S ++P++ L+V +++ ++ E+DL++ R ++ + + W +A Sbjct: 137 SRLHPQVKLEVTSGLCRDLSQAYDNGELDLVLLKQRRNSREGVACWPERLQWIDSARMPS 196 Query: 182 QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVE 241 + +PIPLV +RD ++ + WR+++ +S+L ++AAV G+G++ P Sbjct: 197 FELDPIPLVTFPPRGLYRDDMITAIEGMGRRWRISFTSSSLSGIQAAVADGMGISLLPPR 256 Query: 242 MMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSN---NELAQVIYQAMES 286 +P+ RVL GLP + E ++ + P+++ LA+V+ Q +E Sbjct: 257 AATPEHRVLGRQHGLPEVDSYEIVIVHRPTADVMVTALAKVMSQVLEG 304 >UniRef50_B3QIV6 Transcriptional regulator, LysR family n=4 Tax=Rhodopseudomonas palustris RepID=B3QIV6_RHOPT Length = 304 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 85/285 (29%), Positives = 142/285 (49%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDL LL+TF+ + +F+ + + RTQ AVS Q+ RLE+ G LF + GR +LT H Sbjct: 5 LDLRLLQTFIVLVQTGSFSETSRRLGRTQPAVSLQLNRLEEATGAPLFTKVGRKLVLTNH 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LGYAR I+ DE + L L GV+ +G D A +LP +L S YP + + Sbjct: 65 GELVLGYARTIMGLQDELRARLAAPKLDGVVVLGMPDLYAAYLLPGILADFRSAYPNVDV 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 +++ ++ + +E E+DL + T P+ + W + + P+PL Sbjct: 125 ELKCALSSKLMASVERAEIDLAIVTGMPAFKVGELVAQEELVWVASERSSVHLENPVPLA 184 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 +L + FRD LA L WRL+ ++ ++ ++AAV +G+ V+ + P +R+L Sbjct: 185 MLPPGNIFRDFGLAALESIGRIWRLSCISESISGIQAAVFSGIAVSVVGKSSVLPGMRIL 244 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSP 295 D P LP + +L S+N A+ + + + +P Sbjct: 245 GRGDTFPALPKVDLVLYRSARSSNPAAEALASVIVRHFANSALAP 289 >UniRef50_C5BWR0 Transcriptional regulator, LysR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BWR0_BEUC1 Length = 295 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 92/293 (31%), Positives = 145/293 (49%), Gaps = 3/293 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 D LRTF+AVA +F AAA + +Q +VSQ ++RLE+ G++L R R LT++ Sbjct: 2 FDPTHLRTFLAVARTLSFTQAAAQLGISQPSVSQHVRRLEEAAGRQLLVRDTRAVSLTDN 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G + G+AR IL +DEA S + ++G L GA+D+ A LP +L +P++ L Sbjct: 62 GEAMAGFARSILAAHDEAASYFTGTAMRGRLRFGAADDLAIAQLPGVLRTFRQRHPQINL 121 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 ++ V + A + L + ++DL+ P +R W L P+PL+ Sbjct: 122 ELTVTQTAALQRRLAANQLDLVFVKEPPGETSGRVVRRDRLVWIGLPGTRLPDDAPLPLI 181 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 PS + + L +A WR+ + V AAV+AG+G+ P ++ D++VL Sbjct: 182 TYAAPSLSKTTAVRALAEAGRTWRITCKTLEVNGVLAAVRAGIGIAVYPASLVPDDVQVL 241 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPEGDD 303 G GLP L D + L +P S E + + A+ P S +AP DD Sbjct: 242 PGTLGLPELGDIDITLVANPRSPKEPIEALTAAILRQPFP---STTAAPSDDD 291 >UniRef50_Q0K9T5 Transcriptional regulator, LysR family n=2 Tax=Burkholderiales RepID=Q0K9T5_RALEH Length = 284 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 119/278 (42%), Positives = 167/278 (60%), Gaps = 2/278 (0%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 NLD+ LLRTFVAVA+ FA AA V RTQ+AVSQQMQ+LE + LF R GR+K LT Sbjct: 5 NLDIGLLRTFVAVAEKENFAVAAEQVFRTQAAVSQQMQKLETALDCVLFERVGRSKRLTT 64 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL YAR+I+ NDEA ++ + +GA ++ D+++P L + V+P L Sbjct: 65 AGTRLLDYARRIVGLNDEAYRAMTQRAFDEPVKVGACADAVDSLIPEYLKMCAEVFPGLR 124 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRP--SAFKALNLRTSPTHWYCAAEYILQKGEPI 187 +D++V R ++ L E+DL+V F + LRTSP W A Y Q G P+ Sbjct: 125 VDIQVGRRRWLTSSLRRGEIDLVVMLDPVPNPEFDQVVLRTSPVTWIAGARYHHQPGAPV 184 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PLVL++ PF M + +L+ A+IPWR+A+ STL +RAA++AG+GVT R VEM++PDL Sbjct: 185 PLVLIEGACPFHSMAIKSLSDANIPWRVAFQTSTLAGIRAALRAGMGVTPRTVEMLAPDL 244 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 +VL G+P LP Y L +E A I + + Sbjct: 245 KVLDPHAGMPALPTISYRLYARTDKLSESALGISRLIS 282 >UniRef50_C5B683 Transcriptional regulator, LysR family n=6 Tax=Methylobacterium RepID=C5B683_METEA Length = 300 Score = 273 bits (698), Expect = 7e-72, Method: Composition-based stats. Identities = 91/281 (32%), Positives = 145/281 (51%), Gaps = 3/281 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +L+LDLLR FVAVA+ +F AAA V R+QSAVSQ++ RLE+++G+ +F R R LT Sbjct: 13 DLELDLLRAFVAVAETGSFTAAADVVHRSQSAVSQKVLRLEEILGRRVFDRTSRTLGLTP 72 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL AR++L FND + G L +G S++ LP LL R +YP + Sbjct: 73 DGERLLVAARQMLEFNDRVMRAWREPPTSGTLRLGVSEDFIPGQLPKLLARFGRLYPDVH 132 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 +D+ + + E ++ +D ++ S + + P W +++Y L P L Sbjct: 133 IDLMTGLSCNLLEAYDADRLDAVIAKRSGSNLRGRVIWREPLVWLASSDYELDFTRPARL 192 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 V+L P +R++++A L+ W A AS+L V+AAV GLGVT + +++ Sbjct: 193 VMLAPPCSYRELMIAALDSVRREWVAACTASSLMGVQAAVAGGLGVTLLGRSFVQEGMQI 252 Query: 250 LSGVDGLPPLPDTEYLLC---YDPSSNNELAQVIYQAMESY 287 L + P LP TE + P L + Q++ + Sbjct: 253 LRAPELWPALPMTEVTVLGEDRAPDLVEPLIAFLSQSLAGH 293 >UniRef50_Q7W0I5 Probable LysR-family transcriptional regulator n=4 Tax=Proteobacteria RepID=Q7W0I5_BORPE Length = 306 Score = 273 bits (698), Expect = 7e-72, Method: Composition-based stats. Identities = 89/274 (32%), Positives = 134/274 (48%), Gaps = 5/274 (1%) Query: 12 DLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHG 71 DLDLL +FV+V D F A V RTQS VSQQ+++LE +G LF R GR LTE G Sbjct: 24 DLDLLHSFVSVVDAGGFTRAGERVHRTQSTVSQQIRKLEDALGCALFIREGRGVRLTEDG 83 Query: 72 IQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALD 131 +LLGYAR++L ++E + V+ +G D+ A T L ++ + +P++ L Sbjct: 84 ERLLGYARRMLALSNEIREVVSGERRLEVVRLGLPDDLAVTRLTHMVADFARRHPQVRLS 143 Query: 132 VRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLVL 191 +R +A + E+DL++ P A + HW CAA +PI LV Sbjct: 144 MRCDLSANLHRAQARGELDLVLLKREPGAGPSRAAWPERLHWLCAAGGPATLPDPIALVA 203 Query: 192 LDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLS 251 +R+ + L A WR+AY + L ++AAV+ GLGV +P + Sbjct: 204 FPQGCQYRNRAIHALESAGRRWRIAYESPNLSGLQAAVEGGLGVALLEQRCQTPAMARCD 263 Query: 252 GVDGLPPLPDTEYLLCYDP---SSNNELAQVIYQ 282 + LP +E LC + +ELA++I Sbjct: 264 AL--LPRPAPSELALCMSDTGSRAVHELARLIMD 295 >UniRef50_B6R8G3 Transcriptional regulator n=2 Tax=Rhodobacteraceae RepID=B6R8G3_9RHOB Length = 299 Score = 272 bits (697), Expect = 9e-72, Method: Composition-based stats. Identities = 82/276 (29%), Positives = 148/276 (53%), Gaps = 1/276 (0%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 ++D+D LRTF+AVA+L +F A AV +TQSAVS QM++LE+ +G+ +F + GRN +TE Sbjct: 4 SIDVDQLRTFLAVAELGSFTKAGDAVHKTQSAVSMQMKKLEERIGQPIFVKDGRNSRITE 63 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 HG +L+ YAR+++ NDE S+ + G + +G D+ A+ +LP +L + + P + Sbjct: 64 HGRRLVEYARRMVALNDETLSAFHEPEIAGRIRLGLPDDYAERLLPQVLAAFNRLNPCIN 123 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTT-HRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 LDV + + ++ E+D+ + T ++ +R P W + E+I+ P+ Sbjct: 124 LDVECSSSNEIGRRIQKGELDVGIVTSGDCTSVPGQIVRREPLQWVGSREHIVYDQRPLR 183 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L + +R +A L+ +I ++ Y +++ A+ AV AGL + P + R Sbjct: 184 LAVGPTTCSWRQAGVAALDHLNIQHQVVYTSASAAALAGAVNAGLAIAILPASALRQGQR 243 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 +L +GLPPLP + + + + + + Sbjct: 244 ILGEKEGLPPLPPCDITIIRSQMAIEPVHDALCHHI 279 >UniRef50_A3Y8R3 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y8R3_9GAMM Length = 288 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 76/279 (27%), Positives = 135/279 (48%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + LD++ L TFV + D AA A+ RTQ+AVS Q+++LE++ GK L R L Sbjct: 1 MKRLDINQLATFVTIVDAGNITKAAIALHRTQAAVSIQLKKLEEVAGKSLLNRGYNQFTL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G LL YARKIL ++EA + + +L+GV+ G D A + L + +PK Sbjct: 61 TREGEVLLSYARKILSLSEEALNLINDDDLEGVVRFGIPDGYARAFIQRPLRQFIDRFPK 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + + ++ + + + L + E+DL++ TH P A +R W A + L +P+ Sbjct: 121 VKIQIKNDNSHNLYKSLHAGELDLILVTHDPLASGGDLIRREKICWVKAKDLTLDMNKPL 180 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL L + +R ++ LN ++ W +++ + A+ GL ++A ++ + Sbjct: 181 PLALYEQGCSYRKGIIDALNHVELDWFVSFECQGVTGFDIAISNGLAISALAESLVKDEW 240 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 ++ LP L + E L P ++ + Q + Sbjct: 241 SIIKPASNLPDLGEVEIALHTRPGEIDDAIRCFSQVLVE 279 >UniRef50_C6BUP0 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BUP0_DESAD Length = 296 Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 83/270 (30%), Positives = 135/270 (50%), Gaps = 3/270 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 L DLLR+FV AD +F A V +TQ+AVS Q+++LE+ + LF R GR LT Sbjct: 18 LTPDLLRSFVVAADTGSFTRTAGLVHKTQAAVSMQIKKLEEDLQCLLFKRDGRGVTLTVE 77 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L Y+ KIL+ +DEA +++ L G + +GA D+ A LP +L + +P++ + Sbjct: 78 GEILYRYSSKILKLHDEALTAVSAPTLHGKIRLGAPDDYAMKHLPGILREFAVNHPQVQI 137 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 DV +++ML++ ++DL++ T + + L W + E +PL Sbjct: 138 DVFCDDTPTLSKMLKNGQLDLVIATDKVKTKYSAPL---ELTWILPQRMDPSEVEELPLA 194 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 L +R+ L LNK +R+AY + +L + AAV+ GL + + + R Sbjct: 195 LFHPVCCYRENGLKALNKIGRKYRIAYGSPSLAGLLAAVQGGLAIAVVTKDTTANGCRHA 254 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVI 280 DGLPP+ L + P +E+ V Sbjct: 255 IPSDGLPPIESIYIDLRFQPGIRSEVISVF 284 >UniRef50_A9WT18 Transcriptional regulator, LysR family n=8 Tax=Actinobacteria (class) RepID=A9WT18_RENSM Length = 290 Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 136/276 (49%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 D D LR+F+AVA+ F AA + +Q +SQ +++LE G++L R R LT++ Sbjct: 7 FDNDQLRSFLAVAETLNFTRAAERLGLSQPTISQHIRKLEDAAGRQLVLRDTREVRLTDN 66 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G + +AR IL D+A + ++G L G +D+ A T LP +L +YP++ L Sbjct: 67 GDAMAWFARNILAAQDDAARYFSGAAMRGRLRFGTADDLAYTRLPTILRDFRQLYPQINL 126 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 D+ V ++ + +++ ++DL+ A + +R W L G P+PL+ Sbjct: 127 DLTVSQSDQLYRRVKAGQLDLVFVKLVSGAQEGTVVRPDHFSWVGLEGTQLIPGAPVPLI 186 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 PS R + + L WR+ + V AAV+A +G+T P ++ DL + Sbjct: 187 TYPTPSLSRSLAIDALESTGRTWRITCNTKEINGVIAAVRARIGITVMPSTLIPDDLVSI 246 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 + LPP+ + ++ L +P + ++ + QA+ Sbjct: 247 TRRFDLPPVGEVDFTLVRNPLARTDVVDALEQAIMG 282 >UniRef50_B2IEY6 Transcriptional regulator, LysR family n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IEY6_BEII9 Length = 316 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 91/274 (33%), Positives = 140/274 (51%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + NLD+DLLRT ++L AA + R+ SA+S QM +LE+ VGK LF + GR L Sbjct: 3 LTNLDMDLLRTLSVASELGGLGRAAERLGRSPSAISLQMHKLEEQVGKTLFRKQGRGISL 62 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T+ G LLGYAR+IL NDEA ++ ++G++ +G + LP +L R S YP+ Sbjct: 63 TDAGDLLLGYARRILALNDEALAATRGVGVEGIVRLGVPFDLTSEWLPKVLARFSEAYPR 122 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + +++R R+ + ++ +DL + A + P W + + L K + + Sbjct: 123 VHIELRTDRSVELLQLYNQDLLDLTLAFGPVERPGASFVAEVPVRWIGSTGFRLDKNQDV 182 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL+LLD P FR + L++ WRLA+ + +L + AA +AGLG+T R M L Sbjct: 183 PLILLDPPCWFRQTGIDALDRHQTAWRLAFTSPSLAGLWAATEAGLGITVRTPLGMPRSL 242 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIY 281 L GLP LP +L L + Sbjct: 243 SALDPDHGLPDLPRVSIVLYNSARRYPHLTSFLE 276 >UniRef50_P16931 HTH-type transcriptional regulator dgdR n=16 Tax=Proteobacteria RepID=DGDR_BURCE Length = 294 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 91/283 (32%), Positives = 146/283 (51%) Query: 4 ANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGR 63 AN +L++DLLR+FV +A++ + AAA V RTQSA+SQQM+RLE +V + LF R GR Sbjct: 7 ANTLGRSLEIDLLRSFVVIAEVRALSRAAARVGRTQSALSQQMKRLEDIVDQPLFQRTGR 66 Query: 64 NKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSS 123 +LT G +LL +A++ILR +DEA + L + L G + G D+ A+ LP LL + SS Sbjct: 67 GVVLTHPGERLLVHAQRILRQHDEAMADLCGTGLTGTIRFGCPDDYAEVFLPPLLRQFSS 126 Query: 124 VYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQK 183 +P+ +++ + E LE + VDL + + +R W Sbjct: 127 QHPQAIVEIVCGPTPRLLEQLEKRAVDLAMISLPDDGANDDIIRREQLVWIGYPGLEPAH 186 Query: 184 GEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMM 243 +P+PL L D + L++A +R+AY +S+L + A V++G + Sbjct: 187 FDPLPLALSDPDTLDHIAACDALHRAGRDYRVAYASSSLAGLIALVRSGQAFAVMTQTAV 246 Query: 244 SPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 DL +++G LPPLP L +D + L + + + Sbjct: 247 PADLAIVNGDPRLPPLPAVGITLKFDRKRPSHLTAAFAEHIRA 289 >UniRef50_B8H5P5 Transcriptional regulator, LysR family protein n=4 Tax=Alphaproteobacteria RepID=B8H5P5_CAUCN Length = 301 Score = 269 bits (689), Expect = 7e-71, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 140/283 (49%), Gaps = 3/283 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 NLDLDL+R F+ V + +F A + R+QSAVS Q++RLE+ +G+ L +R R+ T Sbjct: 5 TNLDLDLVRAFLVVCEQRSFTRAGERLGRSQSAVSLQVRRLEEQLGQPLLSRDPRHVAPT 64 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 E G L AR++LR NDE + L +++G + +GA ++ A LP +L + +P++ Sbjct: 65 EQGAAFLPQARRLLRLNDEILAGLGADDIEGEVRLGAPEDFATQHLPAVLGSFARSHPRI 124 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFK-ALNLRTSPTHWYCAAEYILQKGEPI 187 AL V + + L +DL + P + + P W + ++ P+ Sbjct: 125 ALTVTCDLTLNLLDRLSEGALDLALVKREPLGPDLGVRVWREPLVWVALDPELARRDGPV 184 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PLV P +R +A L A WR Y + +L AA++ GLG++ P EM DL Sbjct: 185 PLVAAPAPCVYRKRAVAALEAAGRGWRATYTSPSLAGQLAALRGGLGLSVLPREMAPDDL 244 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNP 290 +LS D LP L D E L + A+ + + S + Sbjct: 245 TILS--DDLPRLEDAEIALLKARGTPPPAAERLADHILSALDR 285 >UniRef50_A6WG79 Transcriptional regulator, LysR family n=2 Tax=Actinomycetales RepID=A6WG79_KINRD Length = 297 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 81/295 (27%), Positives = 138/295 (46%) Query: 1 MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR 60 M + P + LRTF+AVA ++F AAA + QS VSQ +++LE VG++L R Sbjct: 1 MTTGQGPTTTFEPVQLRTFLAVAQTHSFTQAAARLGVRQSTVSQHVRKLEDAVGRQLVHR 60 Query: 61 HGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNR 120 + LT G ++G+AR IL +++A + + G L IG SD+ A T LP +L Sbjct: 61 DTHSVTLTPDGEAMIGFARSILASHEQAAAYFTGARPVGRLRIGMSDDLALTRLPAILRD 120 Query: 121 VSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYI 180 P++ L++ V ++ + LE+ +D+ + P + + +R W + Sbjct: 121 FRGENPRVDLELTVDQSGTLHRRLENDRLDIFIGKRPPRSGEGKLVRRERLVWVGNSSTR 180 Query: 181 LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 L +P+PL + PS + L++ I +R A V + + AAV +G+GV+ Sbjct: 181 LDLSQPVPLAVYPSPSISGAAMHEALDRVGIGYRSACVCRGVNGLIAAVASGIGVSCLAS 240 Query: 241 EMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSP 295 ++ L L LP L + +L +P + + A A P +P Sbjct: 241 SLVPVQLVALGPQHKLPELGQIDLVLLTNPRTRDRPASRALAAAVLSSGPSSLAP 295 >UniRef50_Q28WA0 Transcriptional regulator, LysR family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28WA0_JANSC Length = 291 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 81/281 (28%), Positives = 135/281 (48%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD DL+R F+AV + + A + RTQSA+S Q+++LE +G+ +F R R LTE Sbjct: 5 LDSDLMRGFLAVVETGSLTRAGHRLGRTQSAISMQIRKLEDSLGQSVFVREPRGVRLTER 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G QLL YA++++ DEA +L L G + +G DE +LP +L+ S +P+ + Sbjct: 65 GKQLLPYAQRVVGLLDEAAIALREKPLSGPVRVGVPDEYIQGVLPAVLSAFSQRHPETQV 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 +R +A E L S ++DL V S + L PT W + + P+P+ Sbjct: 125 TLRCDFSAPQLEALNSDKIDLAVIYEGYSTDEVEVLAVDPTVWVTSISHAQHLHRPLPIS 184 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 + RD L +L + IP+ A+ T +R+AV G+ V + P R L Sbjct: 185 IYFSSDWCRDFALHSLEQIGIPYFAAFECDTSGGMRSAVSNGIAVAPLARSSIPPGCREL 244 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPW 291 + DG + + +L +P+ ++ + + + P Sbjct: 245 TAEDGFMGVDNARVVLRRNPAGSSTAIEAMVATLREAFWPL 285 >UniRef50_A9IU06 Transcriptional regulator, LysR-family n=23 Tax=Proteobacteria RepID=A9IU06_BORPD Length = 307 Score = 267 bits (684), Expect = 4e-70, Method: Composition-based stats. Identities = 96/277 (34%), Positives = 138/277 (49%), Gaps = 3/277 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD LLRTF+ + D +FA AA + T SAVS M+RLEQLVG L AR R LT+ Sbjct: 20 LDTVLLRTFLEIVDSGSFATAAERLALTPSAVSGHMRRLEQLVGASLLARTTRRLELTQA 79 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L Y R IL EA + L + L+G L IGAS++ A LP +L R +P + Sbjct: 80 GDTLYAYGRNILDLEREARAKLRGTPLRGRLRIGASEDFAGAWLPQVLQRFRQSHPAATV 139 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFK-ALNLRTSPTHWYCAAEYILQKGEPIPL 189 +++V A + E +DL+ + L P W AA+ +L GEP+PL Sbjct: 140 ELKVGITADLLRQQERGHLDLVFGKQCSRVERSGTLLWNEPLVWAYAADRLLVAGEPLPL 199 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 + +P +R+ +A L + D WR+ + +S++ AA +AG VT LRV Sbjct: 200 AVFPEPCVYRESAVAALGRTDRAWRIVFESSSMAGCLAAARAGFAVTVVADSQRGAGLRV 259 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 L G DGLP LP + + N ++ + +A Sbjct: 260 LDGEDGLPELPAARFYAF--AGNENPVSAALIEAARR 294 >UniRef50_Q1QUX8 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QUX8_CHRSD Length = 294 Score = 266 bits (682), Expect = 5e-70, Method: Composition-based stats. Identities = 83/275 (30%), Positives = 132/275 (48%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D DLLR FV VA+ F+AA + RTQSAVS Q++RLE +G+ LF R R+ +LT Sbjct: 1 MDTDLLRAFVTVAECEGFSAAGKVLHRTQSAVSLQIKRLEDQMGESLFERTSRSVVLTPP 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LL YAR IL+ DEA + ++ +G S+E A T LP LL R ++ +P++ L Sbjct: 61 GGRLLPYARHILKLQDEARRVMGVDRQGELIRLGTSEEQASTYLPELLPRFAARFPEVRL 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 +V + + + +D+ + L P W A + + E +PL Sbjct: 121 EVSCSISGSLVHDFQEGLLDVALVVRHGPTQTGRLLGREPMVWVVAEDRAIDDWEILPLA 180 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 L + FR A L + W + Y + + + V+AGL T + + R++ Sbjct: 181 LNPEGCIFRAHAFAALGPTERRWDVRYSSRSPTGINLPVQAGLAATVKTPRSVPEGCRIV 240 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 +GLPPL E + P +++ +E Sbjct: 241 GEEEGLPPLGHVEIEMHRTPGHSSDAFVAFCDELE 275 >UniRef50_UPI000197C29B LysR family transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C29B Length = 291 Score = 266 bits (682), Expect = 5e-70, Method: Composition-based stats. Identities = 76/277 (27%), Positives = 136/277 (49%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 L+L LL+TFV VA+ F A+ + TQS +SQQ+QRLE LV + LF R R LTE Sbjct: 11 LNLVLLKTFVTVAETGNFTVASQHLNSTQSTLSQQIQRLEALVSQPLFVRGHRILTLTET 70 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LL YA+ IL ND + + + + +G ++ A + L P + L Sbjct: 71 GEVLLSYAKNILALNDTFFMKITGNAVIQTIRLGFPEDLASGQVTPTLAAFMQANPNVRL 130 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 +V + + + + E+DL++ + FK+ P W + +Y + +PLV Sbjct: 131 EVTSGLSRQLHQRYQHGELDLIIVKQKKGEFKSDYHWPEPLCWLTSNQYKRLSNDSVPLV 190 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 + + +R+ + L+ PW + Y S+L +++A+ GLGV+ P+ P R+L Sbjct: 191 VFPENGLYRNDMFKLLDSEQRPWHITYTCSSLAGIQSAIADGLGVSLLPLRAKLPQHRIL 250 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 + +G P + E + + ++++ + Q+ + + Sbjct: 251 TEEEGFPAAQEMEIAMHFHANTSDIITQLAEKLAQQL 287 >UniRef50_C1SL97 Transcriptional regulator, COG0583 n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SL97_9BACT Length = 281 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 87/279 (31%), Positives = 145/279 (51%), Gaps = 4/279 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 ++L ++LL+TF+ V + F AA + +TQSAVS QM+RL + VG+ LF R G+ LT Sbjct: 1 MDLSIELLKTFIVVVEEMNFTRAAERLYKTQSAVSLQMKRLSEEVGEPLFCRKGKTLALT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 E G +L YA +IL+ ++EAC L S + G +T+G SDE I +L + YP + Sbjct: 61 EKGEKLRMYAVRILKSHEEACIGLSGSGVAGNITLGISDEYTPIIFTKILAGFAERYPNV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 ++ V K + + + ++ +D+ + S+ L LR P W + Y G + Sbjct: 121 SVGVVCKPSPELKKRVDENLLDIAILAEYESS--GLLLRYEPMMWMASRTY-AYDGGVVQ 177 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL- 247 L + D R+ + L KA +P+R+AY + +R+AVK+G+ V+ + D Sbjct: 178 LAVYPDYCIARNTGIEYLAKAGVPYRIAYETESSRLLRSAVKSGMAVSPVLSRVYRDDHY 237 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 R L +G P LP L N+E+A+ + + ++ Sbjct: 238 RQLGSEEGFPELPHIPVTLHRSKDRNDEVAEYLLEHIKK 276 >UniRef50_A3VR51 Probable transcriptional regulator n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VR51_9PROT Length = 307 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 93/301 (30%), Positives = 145/301 (48%), Gaps = 5/301 (1%) Query: 2 ISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARH 61 ++ N PI +LD LLR FV++ D TFA AAA + RTQSA+S Q++RLE +V LF R+ Sbjct: 1 MNRNAPIRDLDPSLLRAFVSIVDAGTFARAAARLNRTQSALSMQVKRLEDVVDATLFDRN 60 Query: 62 GRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRV 121 R LT G +LL YAR+I+ ND A SL L G + +G ++ A LP +L++ Sbjct: 61 NRPPTLTIAGEKLLAYAREIVAVNDAALESLRSDKLSGRVRLGLMEDFATFHLPPMLSKF 120 Query: 122 SSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYIL 181 ++P + ++V + + EM+ ++ D ++ + + L W A Sbjct: 121 RRLFPDVLIEVETGLTSELKEMVGAR-FDAVIVMTPENGTEGEFLYRGKPLWGGAPGVDP 179 Query: 182 QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVE 241 E +PL L FR L++A+ W +A+++ AV A V+ G V+ Sbjct: 180 VTHEVLPLALYWPGCFFRKWATEALDRAERRWHAQLIANSIGAVAAEVREGGCVSVFKDL 239 Query: 242 MMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIY----QAMESYHNPWQYSPMS 297 L L DGLP LP+ E L PS++ A+ + + S H+ P Sbjct: 240 TWPEGLCRLGCADGLPDLPNYELRLLRAPSADRGAAKAFADFLGEEVRSLHSDLDQRPAL 299 Query: 298 A 298 Sbjct: 300 T 300 >UniRef50_C3KKD9 Putative LysR family transcriptional regulator n=1 Tax=Rhizobium sp. NGR234 RepID=C3KKD9_RHISN Length = 284 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 82/278 (29%), Positives = 144/278 (51%), Gaps = 1/278 (0%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHG-RNKLLT 68 +LD+DLLR F V F+ AA + R+Q A+S Q++RLE+ VG ++F R R LT Sbjct: 4 DLDIDLLRAFATVHQSGGFSQAAEILGRSQPAISLQIKRLEERVGGQVFERSAARGVPLT 63 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G+ L+ YAR+I+ +DEA + + +++ + +G +E + LP +L+ S V+P+ Sbjct: 64 PVGMTLMEYARQIIALHDEALARVTLPSIKTFVRLGILEELGNYRLPAVLHSFSKVFPEA 123 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 L V+VK + + + +D++V ++ L + W + +P+P Sbjct: 124 NLQVQVKLSNSLMIEMLQGRLDIIVIAAEAEVPNSIPLWSEQLVWVASNAVPSPMRQPMP 183 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 LV L DP +R + L+ A+ P+ +ST+ +RA+V AG+GVT ++ LR Sbjct: 184 LVTLPDPCFYRKAAIRALSAAEQPYTTVCNSSTMAGIRASVIAGIGVTVMGKTEVTEGLR 243 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 VL GLP L D + ++ + +A+ + + Sbjct: 244 VLGSDAGLPRLSDADVVIYFRDKGFESVAKALAAHVRK 281 >UniRef50_Q13P59 Transcriptional regulator, LysR family n=8 Tax=Proteobacteria RepID=Q13P59_BURXL Length = 296 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 91/276 (32%), Positives = 150/276 (54%), Gaps = 2/276 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 D+DLLRTFVAV + +F A+A V R+Q+AVS Q++RLE ++G LFAR+ RN LT Sbjct: 5 FDVDLLRTFVAVVETGSFTKASATVHRSQAAVSMQIKRLETMLGTTLFARNTRNLSLTRP 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LL YAR++L ++EA S+++ + G + +GA D+ ++L +L R S++YP + + Sbjct: 65 GNTLLEYARRVLALHEEAWSAIVRPEVTGRVVLGAPDDYVSSLLSPVLRRFSNLYPHVEI 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAA-EYILQKGEPIPL 189 ++ ++ +A ML ++DL T R + +R+ P W A+ + + P+P+ Sbjct: 125 EIVCAQSTSLAPMLADNKIDLAFVT-RDRKLRGEFVRSEPMVWVGASLDTPVLAASPLPV 183 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 L + R LA L+ A I +R A+ +++L + A V AGL V A + P L + Sbjct: 184 GLYEPGCVARQHTLAALDGARIRYRAAFSSASLMGLVATVDAGLSVIALTRCSVPPRLTI 243 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 L GLP + E ++ S+ + M Sbjct: 244 LGEAQGLPKIAPLEIVVARSAKSDRPTCDYLAAQMM 279 >UniRef50_Q1YP17 Transcriptional regulator, LysR family protein n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=Q1YP17_9GAMM Length = 284 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 86/281 (30%), Positives = 151/281 (53%), Gaps = 2/281 (0%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + NL +DLLR FV+VA L++F A + R+Q A+S QMQRLE+LV ++L R+GRN L Sbjct: 1 MKNLPMDLLRAFVSVAQLSSFTKAGELLGRSQPAISLQMQRLEELVDEQLLQRNGRNLEL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 TE G L GYA +IL ND A S L S ++G + +G E A ++P +++R + YP Sbjct: 61 TEAGENLYGYANQILSLNDLAISQLSKSTVEGKIRLGIPSEFATVLMPRIVSRFAKAYPN 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHR-PSAFKALNLRTSPTHWYCAAEYILQKGEP 186 + L+V + + + DL++ PS+ + ++T W +A+ L K + Sbjct: 121 VTLEVNCELSKSLLSKSGKASHDLILALEDNPSSTNSNLVKTDELVWVSSADKPLLKTDV 180 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +PL++ +R+ + TL++A+ W++ Y L ++ A++ GLGVT + + Sbjct: 181 VPLIVAAQGCIYRNRAIRTLDQANQSWQVVYTIPDLTGIQYAIQEGLGVTVLAKSTVPEN 240 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSN-NELAQVIYQAMES 286 L++L P L + L + N+ ++ + +++ Sbjct: 241 LKILPPSARFPALGEVGISLISSARNRKNQAVHLLIEFLQT 281 >UniRef50_A5ED63 Transcriptional regulator, LysR family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5ED63_BRASB Length = 290 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 84/274 (30%), Positives = 139/274 (50%) Query: 16 LRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQLL 75 LR+ ++V + + A + RTQ A++ Q+QRLE+L GK+LF GR LTE G +L Sbjct: 2 LRSLISVVETGSITETARRLGRTQPAITLQLQRLEELTGKQLFVHGGRRLALTEDGGIVL 61 Query: 76 GYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVRVK 135 YAR ILR +DE S L ++G + +G D A ILP +L+ +P++ +++ Sbjct: 62 TYARSILRLHDELISQLASQEIEGQVVLGTPDLYAAFILPSILSVFRKSFPRIQVELNCA 121 Query: 136 RNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLVLLDDP 195 + + E+++ EVD+ + T +R W + + PIPL LL Sbjct: 122 LSTPLVELVKRSEVDIALVTRMNDFTGGQVVRREQLVWMTGEQSAAHQERPIPLALLPQG 181 Query: 196 SPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGVDG 255 + +RD +A L A++ WR+A + ++ ++AA AG+ VT + +R L DG Sbjct: 182 NIYRDHAIAALEAANLRWRIACQSESVGGLQAAAFAGMAVTVLGRSALVAGMRELGPADG 241 Query: 256 LPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 LP LP E LL + ++ A ++ + Y Sbjct: 242 LPALPQVELLLYKSSGATSKAATALHDYLAHYLR 275 >UniRef50_B1YYS6 Transcriptional regulator, LysR family n=41 Tax=Burkholderiaceae RepID=B1YYS6_BURA4 Length = 291 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 87/280 (31%), Positives = 143/280 (51%), Gaps = 2/280 (0%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + LD D+L T VAVA+ AA AV R+QSAVS Q++ LE +G+ LF R R+ +L Sbjct: 1 MKMLDHDVLATVVAVAETGNMTRAAEAVNRSQSAVSMQIKSLEDAIGRPLFVRKPRSIVL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G LLG+AR++L DEA ++++ + G + IG D+ A ++LP +L + S+ YPK Sbjct: 61 TREGEVLLGFARRMLALRDEAWAAVVRPEVTGKVVIGVPDDYASSLLPSVLKKFSATYPK 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYI-LQKGEP 186 + + V ++ +A +L+ VDL+ T R +R P W + + P Sbjct: 121 VEIQVIGLPSSALAPLLKEGTVDLVCGT-RIKGLSGDFIRHEPMAWAAMTNGPRVWEERP 179 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +P+ + S R+ + +L +A +P+R +Y + +L + + V+AGL V + Sbjct: 180 LPIAVFMPGSVARENAIRSLERAKLPFRTSYESPSLLGLLSMVEAGLAVAPLARCAIPAQ 239 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 L +L GLP LP E +L S + + Sbjct: 240 LSMLGRSHGLPDLPPLELILARSTKSKRPPCDFLADQLME 279 >UniRef50_B2Q7A1 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q7A1_PROST Length = 289 Score = 263 bits (672), Expect = 7e-69, Method: Composition-based stats. Identities = 76/279 (27%), Positives = 132/279 (47%), Gaps = 6/279 (2%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 L+ LL+TF+ VA+ F A+ + TQS +SQQ+QRLE LVG+ LF R R LTE Sbjct: 11 LNFILLKTFITVAETGNFTVASQHLNSTQSTLSQQIQRLEALVGQPLFIRGHRMLTLTET 70 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L YA+KI+ ND + + + L +G ++ A + L +P + L Sbjct: 71 GEVLFSYAKKIIALNDMFFMKITGNAVIQTLRLGFPEDFASGQVTPTLAAFMHEHPNIRL 130 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 +V + + + + +DL++ R FK+ P W + + +PL+ Sbjct: 131 EVTSGLSRQLYQHYQQGALDLIIVKQRKGEFKSDYRWPEPLCWLTSTNNEYLNADSLPLI 190 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 + + +R+ + L+ PW + Y S+L +++A+ GLG++ P+ P R+L Sbjct: 191 VFPENGLYRNDMFRLLDIEQRPWHITYTCSSLAGIQSAIADGLGISLLPLRAKLPQHRIL 250 Query: 251 SGVDGLPPLPDTEYLLCYDPSSN------NELAQVIYQA 283 + +G P + E + SS+ LA+ + Q Sbjct: 251 TEQEGFPAAEEMEIAMHVHDSSDAIKVLAERLARQLEQL 289 >UniRef50_A6UCU7 Transcriptional regulator, LysR family n=12 Tax=Rhizobiales RepID=A6UCU7_SINMW Length = 326 Score = 262 bits (671), Expect = 9e-69, Method: Composition-based stats. Identities = 81/282 (28%), Positives = 138/282 (48%), Gaps = 2/282 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD DLLRTF+AVAD AA V RTQSAVS Q+++LE+L+G LF RH R +LT+ Sbjct: 16 LDSDLLRTFLAVADTGNVTRAADIVRRTQSAVSMQIRKLEELIGSALFERHSRGVILTDE 75 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +L+ AR+I+ D+ +++ L G + IG S+E ++ LP L ++++P + + Sbjct: 76 GRRLVDNARRIVTLLDDTAAAMRSPALDGSVRIGISEEYINSTLPKALGAFAAIHPGVEV 135 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 VR + L + E+D+ V ++ L +PT W ++ + +P+P+ Sbjct: 136 TVRQDTSMSNTAALAAGEIDIAVVFEPGGRTRSEVLMVNPTVWVTCDQHGAHQRQPLPIA 195 Query: 191 --LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 + D+ L +L + R+AYV+ T + AAV +GL + + R Sbjct: 196 TYTYAEGGWCDDLALRSLKARGLECRIAYVSRTSGGLIAAVLSGLAIAPLSRSSIPAGCR 255 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNP 290 L+ DG + + +L + + + A+ Sbjct: 256 ELTEEDGFGIIDMSNVVLRTRRENRSPTVNAMADAIRRAFRA 297 >UniRef50_UPI0001AEBA54 LysR family transcriptional regulator n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEBA54 Length = 285 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 135/278 (48%), Gaps = 1/278 (0%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + NL +D LR+FV +A ++ A + RTQ A+S Q+++LE+++G++LF+R L Sbjct: 1 MKNLSIDFLRSFVLIAQTGSYTQCAEQLQRTQPAISLQIKKLEEMIGEKLFSRDKNRLAL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G +LL Y KI+ ND+A + + G + +G E + T++P ++ R + YP+ Sbjct: 61 TGAGSRLLSYGEKIVALNDQAMAEFGKPQVTGNIRLGIPSEFSTTLMPKIIRRFTQTYPE 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHR-PSAFKALNLRTSPTHWYCAAEYILQKGEP 186 ++L+V + + + DL+++ P + + + W + ++ Sbjct: 121 ISLEVHCALSKDLISEPLKSQFDLILSLQETPDPQQDGYIISDQLVWVGSQRFVNSVPAK 180 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +P++ P +R L+ PW++ Y + L ++ A+ GLG+T + P Sbjct: 181 LPIIAAPSPCIYRKRATNLLSAIKKPWQVVYTIADLNGIQTAINEGLGITVLAKSSVPPG 240 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 L VLS + LP L L +++ ++ + + Sbjct: 241 LHVLSNSESLPELGHVGVCLVNPQKVSSKAISLLTETI 278 >UniRef50_A4XSC8 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=A4XSC8_PSEMY Length = 294 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 82/282 (29%), Positives = 141/282 (50%), Gaps = 3/282 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 L+ D+LRTFVA+AD +F AA V R+ +AVS Q++RLE+ +G+ LF R R LT Sbjct: 12 LESDVLRTFVAIADSGSFTRTAAQVFRSTAAVSLQIKRLEETLGQRLFIREARQVRLTAE 71 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LLGYAR++L+ N+EA ++ + L G + +G ++ + +LP +L + +P + + Sbjct: 72 GEVLLGYARRLLKLNEEAVANFLKPALSGRVCLGIPNDLSTRVLPGVLTTFARSHPAVQV 131 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFK---ALNLRTSPTHWYCAAEYILQKGEPI 187 DV V R+ + +++ E+DL + + + W + + P+ Sbjct: 132 DVCVGRSVELVAKVDAGELDLTLINAGNDGLDDARGEVIYSEELVWAGRDGGLAIQRSPL 191 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL L + +R L L++ + +R+AY AA+ A L + P ++ P L Sbjct: 192 PLALANPGCAWRRTALDALDRQGVAYRIAYSCEQCAGQEAAMTADLAIAPFPRSLVKPPL 251 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 R L GLPPL + L N + + Q ++++ Sbjct: 252 RRLGAEQGLPPLGEYHIKLIRGHQRNEAVEALATQMIQAFAQ 293 >UniRef50_A1B7H3 Transcriptional regulator, LysR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B7H3_PARDP Length = 290 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 86/278 (30%), Positives = 139/278 (50%), Gaps = 1/278 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 L+ DLL+TFV +++ F AA V RT SAVS Q++RLE +G+ LF RH R+ LT Sbjct: 9 LETDLLKTFVTISETGNFTVAAKRVFRTPSAVSMQIRRLEDQLGRALFVRHPRHVTLTAD 68 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L +A+ ILR NDEA S L+G + GA D+ LP +L+R ++ +P + + Sbjct: 69 GEAFLVHAKDILRINDEALSRFRVPQLEGRVRFGAPDDFGVRYLPAILSRFAATHPLVEV 128 Query: 131 DVRVKRNAYMAEMLESQEVDLMV-TTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 +V + + +A E+ E+D+++ + + + + P W A + + P+PL Sbjct: 129 EVFLSTSVILARRFEAAEIDMILTVSAQSDPAPGQVIHSEPLVWVGARDGMAFSRTPVPL 188 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 L P+R LA L+KA +R+AY + AAV A L + PV ++ R Sbjct: 189 ALSSHGCPWRAAALAALDKASRRYRIAYTSEAAAGQLAAVMADLAIAPLPVSLVDEQHRR 248 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 L+ +G + + L +P + ES+ Sbjct: 249 LTEKEGFGAIGSYQLRLQKNPDIGSAAQAFADHVRESF 286 >UniRef50_A5IA94 Transcriptional regulator, LysR family n=6 Tax=Bacteria RepID=A5IA94_LEGPC Length = 283 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 94/275 (34%), Positives = 140/275 (50%), Gaps = 6/275 (2%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +++D L+ F+AVA+ +F AA V RTQSA+SQQ+ +LE L+ K L R GR LT Sbjct: 1 MSIDTITLQCFLAVAETQSFTKAAQRVGRTQSAISQQIAKLENLIEKPLINR-GRELSLT 59 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LGYA++I + E+ LQG + G ++ A IL +L S ++P++ Sbjct: 60 TDGEIFLGYAKRIYELHRESLDRFKAPELQGEIRFGLPEDFASIILSDVLVEFSRLHPRV 119 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVT--THRPSAFKALNLRTSPTHWYCAAEY--ILQKG 184 L+V + E + DL++ T + +++++ T P W E +L K Sbjct: 120 LLNVECDLTLNLIERFNEGKFDLILIKTTQQQVGSESIHVCTEPVEWIGKKELLPLLDKP 179 Query: 185 EPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMS 244 PIPLVL P +R V+ TL+K I WRL Y +++ AAV+AGLG+TA M+ Sbjct: 180 GPIPLVLSPTPCVYRGNVIDTLDKNHIDWRLVYSSASYAGKMAAVRAGLGITAIQRSMIP 239 Query: 245 PDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQV 279 L L D LP L D L SN + + Sbjct: 240 NYLERLD-YDFLPVLNDVHVSLLKKSDSNKAIESL 273 >UniRef50_Q0B2N7 Transcriptional regulator, LysR family n=9 Tax=Burkholderiaceae RepID=Q0B2N7_BURCM Length = 302 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 91/300 (30%), Positives = 134/300 (44%), Gaps = 7/300 (2%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 NLD LLRTFV V+ +T AAA A+ TQ A+SQQ++RLE+ G+ LF R LT Sbjct: 4 NLDTSLLRTFVTVSRRSTMTAAAHALHLTQGAISQQIKRLEECFGQRLFDRSQGRLKLTA 63 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL A +++R ND + GVL +GA + T L + + YP + Sbjct: 64 AGERLLERAEQLVRLNDRIWDDMSEPVFAGVLRVGAPSDLVGTYLAGVFKAFAQHYPHVE 123 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 + + + ++ L VD+ V S LRT P W A P+ + Sbjct: 124 IVLVNLASVELSAALLDGRVDIAVIEQPASEPGGERLRTEPLAWVGAVGGNAHLKRPLAV 183 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 ++ D FR + L + +I WR + + A +A V+ + VTA + DL++ Sbjct: 184 SIVSDACVFRPALFDALTQHEIAWRTVFENGDIEATKATVRMDMAVTAWLASTVPSDLQM 243 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPEGDDSLLIER 309 L GLP LPD L PS L +E N + + AP G D L+ Sbjct: 244 LRPAQGLPTLPDFAVTLHLPPSGTTPL-------VEEMANFIRNGFLHAPSGGDGRLLSG 296 >UniRef50_A8LQJ4 HTH-type transcriptional regulator n=5 Tax=Rhodobacteraceae RepID=A8LQJ4_DINSH Length = 298 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 85/283 (30%), Positives = 147/283 (51%), Gaps = 3/283 (1%) Query: 6 RPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNK 65 R NL DLLRTFV V DL + + RTQ A+S Q++RLE++ GK+L A+ G+ Sbjct: 3 RKFTNLQTDLLRTFVTVVDLRNYTETGRILGRTQPAISLQIKRLEEITGKKLLAQQGKQV 62 Query: 66 LLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVY 125 LT G LLGYAR++LR ND A ++L +++ G L +G + A ++ R + Sbjct: 63 ELTPDGQTLLGYAREMLRLNDRAVANLQQASILGTLRVGLPVDYAIEYFQSIITRFAREN 122 Query: 126 PKLALDVRVKRNAYMAEMLESQEVD--LMVTTHRPSAFKALNLRTSPTHWYCAAEYILQK 183 P + LD+R R+ + L ++D + +T P+ ++ P W CA ++ + Sbjct: 123 PAVQLDIRCNRSPDLLSALHVDDLDMTIAITDSMPAPHVSVYWSEHP-VWVCARDHRIDP 181 Query: 184 GEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMM 243 +P+ +V + +R ++ LN WR+++ + + A++ AV G+GVTA + + Sbjct: 182 DQPLKVVAHPNGCFYRKRMIDALNTEGRDWRISFESLGVSALQKAVLDGMGVTALTKKTL 241 Query: 244 SPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 P +R+LS +G P L + L Y ++ A + + + Sbjct: 242 LPGMRLLSPGEGFPNLANIHVGLFYKHVKMSDAALKLIEKITE 284 >UniRef50_A6W298 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=A6W298_MARMS Length = 283 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 99/278 (35%), Positives = 165/278 (59%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 NL + L+T +A+ + +F+AA+ V RTQSAV+ QMQ LEQ++G LFA +GRN+ LT Sbjct: 4 NLQISHLKTLIAINEEGSFSAASERVGRTQSAVTHQMQNLEQIIGTPLFAMNGRNRELTN 63 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G+ LL +A +I+ ++A S+ + G + +G E A+ + P +L + +P Sbjct: 64 AGLTLLRHAYEIIALCNQAVSAAEKNFNIGTIRVGTPLEIAEDLWPQVLRVFNEAWPNTR 123 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 + + V+R+ + ++LES E+DL ++T R A K L + +W AA++ EP+PL Sbjct: 124 VILHVERSPLLMQLLESGELDLAISTRRLGAHKGKPLTSLAVNWIAAADWEYIPREPLPL 183 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 +L D+PS FR M L+ L+ + +P+ +V+S++ VR+AV AGLGVTAR + P++++ Sbjct: 184 ILTDEPSMFRRMALSALDISGLPYYEKFVSSSMLGVRSAVIAGLGVTARTISGFPPEIQL 243 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 L GLPPLPD Y + + + + + + Y Sbjct: 244 LDSKIGLPPLPDISYYVHQSDQRMTKECEALLEIILQY 281 >UniRef50_A3YEV8 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YEV8_9GAMM Length = 297 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 78/285 (27%), Positives = 138/285 (48%), Gaps = 4/285 (1%) Query: 1 MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR 60 M + R LD DLLRTFVA+A+ AA + RTQSA+S Q+++LE +LF R Sbjct: 7 MKNIERS--QLDSDLLRTFVAIAETGNLTQAANYLNRTQSAISVQIKKLEASFSTQLFYR 64 Query: 61 HGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNR 120 R LLTE G +LL ARK++ + + L + L G + +G D+ IL L Sbjct: 65 QPRGMLLTEDGHRLLPEARKLIAEVNR-IAGLFTNKLSGRVALGVPDDCGLVILESGLRH 123 Query: 121 VSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYI 180 + P + + VR ++ + +++ E+DL + P L + W Sbjct: 124 FLANNPDVEVSVRCSLSSQFPQAIQAGELDLALYLASPEEDFDTILWQEESVWVAHESLQ 183 Query: 181 LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 L + +PL + D +R++ + L + + P+++ + + ++ ++ AV AG+ V + Sbjct: 184 LMPDQVVPLAVYDRDCWWREVAIDALEEVNRPYQMTFSSESIAGIKTAVNAGVAVAMLSI 243 Query: 241 EMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 + P +++L+ DG P LP + L S +EL + ++ Sbjct: 244 NSVEPHMKILTKADGFPSLPPSSMALL-RHSQQSELCNAMEDSIR 287 >UniRef50_Q2C715 Transcriptional regulator n=2 Tax=Photobacterium RepID=Q2C715_9GAMM Length = 287 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 75/279 (26%), Positives = 143/279 (51%), Gaps = 2/279 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D++ LR+F+A + +F AA R+QSA+S QM++LE + +LF + GR +LTE Sbjct: 1 MDIEALRSFLAFVETGSFTRAAKQSFRSQSAISMQMKKLEDELNTQLFTKDGRMLVLTED 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +L +A +I+ +D+A L Q + +G D+ A++ILP+++ + +P ++L Sbjct: 61 GQRLATHATQIIATHDDALLELKNKLPQQTIHLGCPDDYAESILPYIVALLREEHPHISL 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 + + ++ +L+S +DL + T P++ + L+T W + + + +P+P+V Sbjct: 121 QITCAPSVHLKGLLDSNRLDLAIVTRSPTSQEGYFLQTDKGIWVGSPHHDIVNQQPLPIV 180 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 L F + L K + ++L + A + V+ GL ++A M DL L Sbjct: 181 LFQRDCKFHSAAIEGLIKRNRHYQLVSCCISATANKGLVRQGLAISAMAKCSMPNDLIEL 240 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELA-QVIYQAMESYH 288 LP LP + +L + L+ + I + ++ YH Sbjct: 241 IAPH-LPSLPVVDIVLSLPSKPHLLLSPESINRMIDRYH 278 >UniRef50_C5CP23 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=C5CP23_VARPS Length = 301 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 92/294 (31%), Positives = 136/294 (46%), Gaps = 7/294 (2%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +N D LL+ F AV N F AA + TQSAVS Q++RLE+LVG+ LF R R LT Sbjct: 1 MNFDTGLLQAFTAVHRANGFTRAAEQLHLTQSAVSHQIRRLEELVGRPLFHRTTRRLRLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L +A +IL+ D S ++G + G + LP LL + + P + Sbjct: 61 ADGEDFLRHAERILQAQDALARHFRCSPIEGTVRFGVPESFMSEGLPQLLQQFARSCPNV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 L+V V +A M+ +E+DL V + LR P W A + G +P Sbjct: 121 RLEVSVGLTLDLATMVRERELDLAVVVSVSGEVEGTLLRRLPMVWAAAEGFERTDGASLP 180 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L P R + + LN+A IPW A+ + +L +R A +GL V + + P + Sbjct: 181 LAYSPPPCVCRQVSIDALNQAGIPWHGAFSSHSLQDLRTAALSGLAVATFTRDNLRPGMA 240 Query: 249 VLSGVDGLPPLPDTEYLLCY-------DPSSNNELAQVIYQAMESYHNPWQYSP 295 VL GLP LP ++ L Y + EL ++I QA ++ + P Sbjct: 241 VLDERHGLPALPMLDFTLAYGEGDAGERSPAVAELGRLIEQAEWAHRDKAARRP 294 >UniRef50_A4YNE0 Putative transriptional regulatory protein, LysR family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YNE0_BRASO Length = 286 Score = 259 bits (664), Expect = 6e-68, Method: Composition-based stats. Identities = 85/286 (29%), Positives = 133/286 (46%), Gaps = 5/286 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARH-GRNKLL 67 +N D+D LR+F+ +AD +F+ AA V R+QS +SQQM +LE VGK L R GR L Sbjct: 1 MNFDIDCLRSFLVIADTMSFSRAAETVGRSQSTISQQMTKLEMQVGKPLLTRRKGRVLEL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G + + YAR+IL+ NDEA +S+ L G + +G + L R P Sbjct: 61 TPEGDRFVQYARRILQLNDEAYASMRDDVLVGFVRLGVPLDFFGRDFTTWLARFKRKNPM 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + ++V ++ + + E DL A ++ T W Y I Sbjct: 121 VGIEVEANQSENLMKRSARGEFDLAFFKQDVGARAGTSMLTEQLVWVSGPNYS-PDDASI 179 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PLVL + +R L++L + D W L++V+ + ++AA GLG+T ++ P L Sbjct: 180 PLVLFPEGCAYRRFALSSLKQHDRRWHLSFVSPSFECLKAATLEGLGITVLARALVQPPL 239 Query: 248 RVLSGVDGLPPLPDTEYLLCY---DPSSNNELAQVIYQAMESYHNP 290 R++ GLP LP E + + EL + + P Sbjct: 240 RIIRQDLGLPRLPPVELAYARGRTNSRTVGELTTFLADRLAGAGLP 285 >UniRef50_B1KPF3 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=B1KPF3_SHEWM Length = 281 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 85/274 (31%), Positives = 141/274 (51%), Gaps = 1/274 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D+D LR+F+A + +F AA +TQSAVS QM+RLE +GK LF + GRN +L+ Sbjct: 1 MDIDALRSFIAFVETGSFTRAAKQTHKTQSAVSMQMKRLEGELGKGLFEKEGRNLVLSVQ 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +L YA+ +L+ +DE ++L +++ L +G D+ AD+ILP ++ + PKL L Sbjct: 61 GRRLALYAKPLLQLHDETVATLKSPDVRPRLHLGCPDDYADSILPSIVKLLHRYLPKLEL 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 + + + ML+S E+D + T P + + L T W + E + P+P+V Sbjct: 121 QITCASSYLIRVMLDSGELDAAIVTRLPDSEEGYLLTTDVGVWIGSEEMDITAQNPLPIV 180 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 L F + L K +RL +S+ A++ VK G+G+ A D V+ Sbjct: 181 LFQKDCKFHLAAIDGLMKQGREYRLMASSSSATAIKGMVKQGIGLGAMAKLSAGQDCFVI 240 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 + LPPLP L +++ L+ + Q + Sbjct: 241 -ESESLPPLPSIGIALVISSRAHSPLSAELAQQL 273 >UniRef50_C5A914 Regulatory protein n=2 Tax=Burkholderia RepID=C5A914_BURGB Length = 301 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 94/280 (33%), Positives = 143/280 (51%), Gaps = 5/280 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 NLD+D+LRTFV +L +FA AA + R+QSAVS Q++RLE+ VG+ L + GR LT Sbjct: 6 NLDMDVLRTFVTGFELGSFARAAERLGRSQSAVSTQLRRLEEQVGQPLVRKSGRGLALTT 65 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LLGYA+++L NDEA SL +++ G +G + A+ LP LL R + +PK+ Sbjct: 66 AGESLLGYAKRLLALNDEAVESLRGADVAGWARLGLPQDFAEGWLPALLQRFARAHPKVR 125 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSA-FKALNLRTSPTHWYCAAEYILQKG---E 185 ++V+V R + E E+D+ + + + + P W A + E Sbjct: 126 VEVQVDRAVPLVERTLRGELDIALVWGDAAGMPRGEKVADVPLQWIGAPGWPGVASLGPE 185 Query: 186 PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSP 245 P+P P FR + L+ A +PWRL + + +L + AA + GLG+TAR + Sbjct: 186 PLPFAAFAPPCGFRSAAVGALDAAGLPWRLVFTSPSLSGLWAAAEGGLGITARTAIHLPK 245 Query: 246 DLRVLSGVD-GLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 L VL GLP L LLC + + + + Sbjct: 246 TLAVLDPAATGLPRLASIPLLLCRAEADPPPAVERLTAIL 285 >UniRef50_B2JVD1 Transcriptional regulator, LysR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JVD1_BURP8 Length = 282 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 82/280 (29%), Positives = 131/280 (46%), Gaps = 7/280 (2%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELF--ARHGRNKLLT 68 LDL+LL+T V V D +F A V RTQS VSQQ++RLE+ VG+ L R G T Sbjct: 2 LDLELLKTLVCVVDEGSFTRAGDRVHRTQSTVSQQVRRLEERVGRTLLMRDRTGNQVTAT 61 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 EHG L YAR+++ + EA +L + + IG ++ + +L+ P Sbjct: 62 EHGELLTHYARRLIALSQEAQDALASDVSRVPIRIGVPEDFCAKRMASILSGFVKARPDA 121 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAA--EYILQKGEP 186 L+ + + L E+D+ + P + +L W E ++GEP Sbjct: 122 RLETVTGMSGDLQRKLSGGEIDIALVKREPGSGPSLAAWPESLVWVRGRQVEVPSEEGEP 181 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +PL L +R + TL+++ WR+A+ + +L ++AAV +GLG+T P + P+ Sbjct: 182 VPLALFPQGCVYRKRAIRTLDQSKRSWRVAFGSHSLTGIQAAVASGLGITVLPTTAVLPE 241 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 S LP LP TE L + N + + + Sbjct: 242 H---SLCFDLPRLPPTELALVGAGGALNAVQSALVDFLRE 278 >UniRef50_B1LS77 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=B1LS77_METRJ Length = 294 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 94/281 (33%), Positives = 147/281 (52%), Gaps = 5/281 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 NLD+D+LRTFV +L +FA AA + R+QSAVS Q+++LE+ VG+ L + GR LT Sbjct: 5 TNLDMDVLRTFVTGFELGSFARAAERLGRSQSAVSTQLRKLEEQVGQPLVQKAGRGLALT 64 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G +LGYA+++L NDEA L + L+G +G + + A++ LP +L R S YP++ Sbjct: 65 AAGESMLGYAKRLLELNDEAVDRLRGTELEGWARLGLAQDFAESWLPAVLKRFSRAYPRV 124 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHR-PSAFKALNLRTSPTHWYCAAEYILQKG--- 184 ++V+V A + E E+D+ + A A + P W ++ G Sbjct: 125 RIEVQVGLGAQLIEKALKDELDVALVWGDGGGAPHAQRVADVPIRWIGPPDWPGLAGLGR 184 Query: 185 EPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMS 244 EP+PL P FR ++ L+ +PWRL + + +L + AA + GLG+TAR + Sbjct: 185 EPVPLAAFAPPCTFRSAAVSALDARGLPWRLVFTSPSLSGLWAAAEGGLGITARTAVGLP 244 Query: 245 PDLRVLSGVD-GLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 L VL GLPPLP+ L + + + + Sbjct: 245 KTLSVLDPAATGLPPLPNAALTLHQAEAELSPAVARLTDIL 285 >UniRef50_A9DC03 Transcriptional regulator, LysR family protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DC03_9RHIZ Length = 301 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 85/286 (29%), Positives = 146/286 (51%), Gaps = 3/286 (1%) Query: 3 SANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHG 62 N P+I LD D+LR+FVA+A+ +F AAAA + RT SAVS Q++RLE+ +G +F R Sbjct: 4 PVNHPLIMLDPDVLRSFVAIAETGSFTAAAARIYRTPSAVSMQIKRLEEQLGVSVFLRDA 63 Query: 63 RNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVS 122 RN LT G LLGYAR+++ N E S + S + GV+ IG+ + + +LP +L R + Sbjct: 64 RNVALTHDGEVLLGYARRLIALNRETISRFVTSEVSGVVRIGSPSDYGEAVLPGVLKRFA 123 Query: 123 SVYPKLALDVRVKRNAYMAEMLESQEVDLMVT--THRPSAFKALNLRTSPTHWYCAAEYI 180 +P + +DV + +++ + + S +D+ + ++ + T W A Sbjct: 124 KSHPSVVVDVVIDQSSSLLKRFGSGHLDIALVSCMRGSTSDAGEVVMTDDIVWAGAKGGQ 183 Query: 181 LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 +P+P+ + D+ +R+ LA L K +R+A++ S + RAA+ A L + Sbjct: 184 ACLMDPLPVSMWDEGCVWRESALAALEKVGRSYRVAFMTSHMAGQRAAILADLAIAPMGR 243 Query: 241 EMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 + PD+++L GLP + L S + + + Sbjct: 244 HFVGPDIQILDENCGLPAPGQYQLQL-KVGSDPSPQVSALSDHFRA 288 >UniRef50_A8TVM4 Transcriptional regulator, LysR family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TVM4_9PROT Length = 285 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 95/282 (33%), Positives = 145/282 (51%), Gaps = 2/282 (0%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 ++LD +LLRT +A+ D AAA V R+ SAVS Q++RLE +G +LF R GR + T Sbjct: 1 MDLDTNLLRTVLALVDGGGLDAAAQHVGRSPSAVSLQIKRLEDRLGAQLFDRSGRRLVPT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G+ L+ YAR+ILR ND+A + + +L + + A+T LP L S +P++ Sbjct: 61 RRGLLLVDYARRILRLNDDAVRDIAEPAVSQILRVALPQDYAETWLPGFLQTFSVNHPEI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 L V V E L EVD+ + P A+ + P W A + + GE +P Sbjct: 121 DLRVSVGGGVDALEALARDEVDVAMALGLPLTEGAIPVAEVPLLWLGA-DSAVSSGEVVP 179 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 +V P FR+ + L++A PW++ + + +L VRAAV+AGLGVT R E + Sbjct: 180 IVAFPPPCRFRERGIEALDRAGRPWKIVFTSPSLGGVRAAVRAGLGVTVRTPEGLGDGRV 239 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELA-QVIYQAMESYHN 289 + G LPPL + PS+ + A Q + A++ Sbjct: 240 DVGGAWALPPLGTVTLAVYPGPSARSGPAGQFVDSAVDGLRQ 281 >UniRef50_A0NXC5 Transcriptional regulator, LysR family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NXC5_9RHOB Length = 302 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 80/292 (27%), Positives = 139/292 (47%), Gaps = 3/292 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +++LL FVAVA+ A + + RTQ VS Q++RLE+ VGK L R R LT Sbjct: 5 RFNIELLEAFVAVAEAGNVTHAGSRLNRTQPCVSTQLRRLEERVGKPLIERSARTMNLTP 64 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G L +A +ILR ++EA L L G + +G + A L + ++P + Sbjct: 65 AGRILYQHATEILRSHEEARLRLSAPELTGTVHVGLPEWYATGQLQSIFCNFVRIHPNVK 124 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 L++ V +A + EML + E++L + + K + + P HW L +P+PL Sbjct: 125 LEMTVADSATLHEMLSNNEINLAIALVSQTKQKPVEIFEEPLHWAVGDNCPLT--DPLPL 182 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 ++ +P PFR++ +L +A W +++ A + AV +G G+ P + ++ Sbjct: 183 IMFPEPCPFREISFGSLARAGRQWYERITTTSVAAAQVAVLSGAGLCCLPSGAILEGFKI 242 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPEG 301 L DG P LP T+ + ++ + + + + + +P SA G Sbjct: 243 LKEQDGFPKLPATQLAIYTQSTTQSPIVDYLEEHLNDLLQ-NAIAPRSALAG 293 >UniRef50_Q2BIB7 Probable transcription regulator protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIB7_9GAMM Length = 289 Score = 256 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 75/265 (28%), Positives = 131/265 (49%), Gaps = 1/265 (0%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +L D L++FVA D + + A VCR+Q A+S Q+Q+LE +G + R R LT Sbjct: 5 DLQFDWLKSFVATVDAGSISGATRVVCRSQGAISLQIQKLESAIGAPVLIRDSRRISLTP 64 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LL YAR+IL+ + EA + ++G++ IGA ++ A L ++ + YP + Sbjct: 65 IGNDLLIYARQILKLHSEALEITRGTEVRGIIRIGAPEDYAQAYLSPVIRAFAQRYPNVE 124 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 + + + +A + + +ES +DL +TT + L HW + Y +P+P+ Sbjct: 125 IMLTCEPSAALIDQVESGVLDLAITTVH-GLDRGTFLFNEEVHWVASESYGTWNKDPLPI 183 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 D+ S R +VL L++ + + + Y + + A +G+GV ++P+L V Sbjct: 184 AAHDEGSHIRKVVLEKLDQCNKRYNIVYQSPSTAGQIIAATSGIGVAVLTQCSLAPELIV 243 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNN 274 L +GLP LP L + + Sbjct: 244 LGEDEGLPSLPSMRVELIRRKGTQD 268 >UniRef50_A4TW42 LysR-family transcriptional regulator n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TW42_9PROT Length = 300 Score = 256 bits (655), Expect = 7e-67, Method: Composition-based stats. Identities = 97/284 (34%), Positives = 150/284 (52%), Gaps = 3/284 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +LDLDLLRTFV + D F A + RTQS +SQQ++RLE +G+ L R GR +TE Sbjct: 13 SLDLDLLRTFVGIVDSGGFTRAGQRLHRTQSTISQQIKRLEDQIGQPLLLRQGRQVQVTE 72 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LLGYAR++L +DEA ++L+ + ++ +G S++ A LP +L S P++ Sbjct: 73 AGETLLGYARRLLALDDEARATLVRREVGEIIRLGVSEDFASRHLPRVLTAFSRANPQVR 132 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 LD+R + + + E+D+ + A+ + P W +A L P+PL Sbjct: 133 LDIRADLSVKLRADFDLGELDVALFKGEQPMDSAVGVWPEPVFWTASAHESLPPLHPLPL 192 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 L FR V+ L+++ PWRLAYV+ +L ++AAV +G+ + + PDLRV Sbjct: 193 ALFPQGCLFRRQVVDRLDQSRRPWRLAYVSPSLAGIQAAVASGMALAPLGQTGLHPDLRV 252 Query: 250 LSGVD-GLPPLPDTEYLLCYDPS--SNNELAQVIYQAMESYHNP 290 L + GLP L + L P S + LA I + + + P Sbjct: 253 LEAAEMGLPDLSPVWFSLVVRPGGASRHHLAADIARVVGALDLP 296 >UniRef50_A0NRR7 Transcriptional regulator, LysR family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NRR7_9RHOB Length = 280 Score = 256 bits (654), Expect = 8e-67, Method: Composition-based stats. Identities = 89/276 (32%), Positives = 148/276 (53%), Gaps = 1/276 (0%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 + LD LLRTF+A D +F+ AA V ++ + VS Q+QRLE +GK LF R RN LT Sbjct: 1 MQLDHALLRTFLACVDAMSFSRAATRVHKSPATVSMQIQRLEDRIGKPLFVRDTRNLALT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G +L GYAR+ILR +DEA + ++G +TIGA D+ +LP +L R +S++P++ Sbjct: 61 RTGEELEGYARRILRLHDEAVEAFRQPEMEGTVTIGAPDDYIAAMLPDVLRRFASLFPRV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 L+V ++ + +E +DL + T R + +R P W + + + +P+P Sbjct: 121 ELNVVCAQSTALLPQVEDGRIDLAIVT-RTGGTEGRLIRREPMVWISSRDGQAMERDPLP 179 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 + L + S R + LA L ++ + +R AY + + A+ V+AGL V A + P + Sbjct: 180 VALYEPGSQARTVALAALGRSGLRYRSAYSSFSHSALVTLVEAGLAVAAVVQMAVPPTVE 239 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 + GLPPL + +L + + + + A+ Sbjct: 240 RVDHDSGLPPLDPLDIILVRSKHTRSSACEALADAL 275 >UniRef50_B4EPV1 LysR family regulatory protein n=7 Tax=Burkholderia RepID=B4EPV1_BURCJ Length = 293 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 88/267 (32%), Positives = 133/267 (49%), Gaps = 2/267 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD LL TFVAVAD+ +F A + +QSAVS Q+ RLEQ V + L R+ R+ LT H Sbjct: 6 LDTALLHTFVAVADVRSFTGAGRRLNLSQSAVSAQIVRLEQQVDQTLLVRNTRSVTLTPH 65 Query: 71 GIQLLGYARKILRFNDEACSSLMFSN-LQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LLGYAR +L + EA + L N + L IG S++ A LP L+ R + L Sbjct: 66 GETLLGYARAMLNLSAEARARLGTGNAVDVKLRIGVSEDFAGGWLPDLMRRHGAARRGLR 125 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 L++ V + E DL++ + + L P W A L +G+ +PL Sbjct: 126 LELVVDIGDSLFRRHADGEFDLVIGSRCSHSGHGATLWQEPLVWAFARHEPLPEGD-VPL 184 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 DP P+R + L A + +R+A + ++ +R +AG+ + P + LR Sbjct: 185 ACFPDPCPYRGAAITALALAGMRYRIACESPSVTGIRTFARAGIAIAPVPRSAIDDTLRE 244 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNEL 276 L DGLP LP+ E+++ +D + Sbjct: 245 LGLPDGLPALPEMEFVMMHDARMPAAV 271 >UniRef50_Q5FRD9 Transcriptional regulator, LysR family n=1 Tax=Gluconobacter oxydans RepID=Q5FRD9_GLUOX Length = 290 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 83/288 (28%), Positives = 145/288 (50%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 ++LD L++F+AVA+ F +AA + +QS +SQ + RLE+ +G L AR ++ LT Sbjct: 1 MHLDPFHLQSFLAVAETLHFTSAAQSQGVSQSTISQHVSRLEEQLGTRLLARSTKSVRLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 E G L+G AR++L+ D S +G + +G +++ T P +L + +P L Sbjct: 61 EDGTALIGLARQLLQCEDSILSRFRQETPRGTIRLGVTEDLLLTRFPEILGTFRASHPSL 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 + + V +AY+A +L+ E+D+ R + + L T WY A + IP Sbjct: 121 QITMTVGLSAYLAPLLDQGELDVWCGMRRTTETRGQKLWTEDMRWYAPAGTEFPAEQSIP 180 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 LV D S R + + TLNKA W LA+ + +L A+ AAV+AG GVT +P + + + Sbjct: 181 LVTFPDGSVTRRLAIETLNKAGRAWHLAFTSGSLGALLAAVRAGYGVTPQPAFLRNVEHL 240 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPM 296 LP +P E++ + +++ + + ++ Q + Sbjct: 241 SHCAPGLLPEMPQVEFIASTRHQTAQGPEELLIRTLCAHIPRLQPDLL 288 >UniRef50_Q7W0V6 Putative lysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7W0V6_BORPA Length = 293 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 87/278 (31%), Positives = 130/278 (46%), Gaps = 2/278 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD LLR+FV V D F A+ + TQS VSQ + RLE+ +G L R R+ L TE Sbjct: 6 LDPVLLRSFVTVVDTGNFTRASEHLHLTQSTVSQHVIRLEENLGCRLLDRGQRHVLPTEE 65 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LLGYAR ILR DEA S+ + VL +GA ++ L +L + + YP L L Sbjct: 66 GERLLGYARSILRLADEARESVAAAQGNAVLRLGAPEDFMGAALMPVLAPLLARYPLLRL 125 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYI-LQKGEPIPL 189 + + + E+DL++ P W A + L GE +PL Sbjct: 126 EFDSGLSHQLLRRYRDGELDLLLVKQWEVDADCQAHWPEPLCWVAARDGPTLPAGEAVPL 185 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 + + +R + TL + PW + Y +++L + AAV AGLGV+ P +LRV Sbjct: 186 AVFPAGALYRQEMTRTLEASGRPWHIRYASTSLAGLVAAVGAGLGVSLLPAASAGGELRV 245 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 L DG P + + L + + A+ ++ Sbjct: 246 LRKRDGFPAVDGLQLGLYARARLG-AAGRDLRDALAAH 282 >UniRef50_C5CZ98 Transcriptional regulator, LysR family n=6 Tax=Proteobacteria RepID=C5CZ98_VARPS Length = 289 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 77/285 (27%), Positives = 136/285 (47%), Gaps = 5/285 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 + +D LR VAV D + +AAA V R+QSAVS Q+++LE +G+ + R R+ +T Sbjct: 5 DFQIDWLRALVAVVDAGSLSAAAPLVHRSQSAVSMQIKKLENALGQAVLLRGPRHLEVTP 64 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G QLLGYAR++L E +++ L G + +G D+ A T L +L + Y + Sbjct: 65 AGAQLLGYARRMLELQSETQNAMFGPELAGRVRLGVPDDYASTYLTPVLRSFAGRYKGVE 124 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 +++ +++ + + E+DL + + R + L P W A++ + P+P+ Sbjct: 125 IELTCEQSTSLIPKIARGELDLALVS-RDKPQRGQLLFQEPLVWVGTAQHEAWRRNPLPI 183 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 + + S R L++L +R+ Y +S+L AAV++GL V + P L++ Sbjct: 184 AVYEAGSMARTAALSSLAARRRAYRIVYHSSSLAGQLAAVESGLAVAVFTRCSVPPHLQI 243 Query: 250 ---LSGVDGLPPLPDTEYLLCYDP-SSNNELAQVIYQAMESYHNP 290 L LP L + S + +Y+ M +P Sbjct: 244 LQNLPSGFDLPRLKSMDVTALRSKVSLRSPAVDAMYEQMVRTLSP 288 >UniRef50_Q317K8 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q317K8_DESDG Length = 301 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 83/296 (28%), Positives = 142/296 (47%), Gaps = 18/296 (6%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 + L++DLLR F AVA+ F AA + + TQSAVSQ+++RLE +G+ L R R L+ Sbjct: 1 MELEIDLLRCFAAVAEEGGFTAAGSRIGLTQSAVSQRIRRLEDRLGRRLLVRTTRTLSLS 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LL YA+++L +DEA + L S+++G L IG D +P + + +P + Sbjct: 61 TEGEMLLHYAQRMLALHDEALARLRASSIKGALRIGFVDYFGPDAMPETIRQFIRSFPDI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEY--------- 179 L++ + ++ + ++D+ + + W C Y Sbjct: 121 HLELHAGLGMELRQLFDHGKLDV-LVAGDDGQHTGTCIARDTLVWACHTAYNCAAARPAF 179 Query: 180 --------ILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKA 231 G P+PLV L P FR +A L PW + + A+ + +V AAV+A Sbjct: 180 MLDHLAAEPAATGAPVPLVALPLPCVFRSAAIAALESLQRPWEVVFTATGMASVLAAVRA 239 Query: 232 GLGVTARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 GLG+T P ++PDL++ + +G PPLP + + + N + + + + + Sbjct: 240 GLGITVLPRSALTPDLKIPAPEEGFPPLPAFSTCIYANDNVNLQALEALTRHLRQQ 295 >UniRef50_A6VRV6 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VRV6_MARMS Length = 289 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 80/279 (28%), Positives = 132/279 (47%), Gaps = 7/279 (2%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + +L ++LLRTF+ VA+ AA + + S VS Q+ RLE L+ L R L Sbjct: 1 MRDLPINLLRTFMVVAETLNLTEAAKQLHKAPSTVSMQLNRLEGLITNPLMERGQHGVRL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G+QL +A+++L +D+ S + GV+ +G D+ A L +L YP+ Sbjct: 61 TAAGVQLRAHAQQLLNLHDQIVGSFQNIEISGVVRLGTHDQYASRTLAPILQDFILSYPE 120 Query: 128 LALDVRVK-RNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEP 186 L+ R Y+ ++LE ++D+ + + LR W + ++ + Sbjct: 121 AELEAFCDYRPDYLVDLLEKGKLDIALVEMLADTEGGIRLRRDELVWVGSKDHFVHTQAV 180 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +PLV+ + R L KA IP+R+A+ + + V AAV+AG+GV P + D Sbjct: 181 LPLVVFAEGCKHRQFACEALTKAKIPYRIAFTSQSRSGVIAAVRAGIGVAIIPYHTLEED 240 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSNN---ELAQVIYQ 282 L + D LP LPD E L +N L ++I + Sbjct: 241 LVI---YDNLPNLPDMEVTLFTSEKANEATLRLEKIIVE 276 >UniRef50_B9JX79 Transcriptional regulator LysR family n=1 Tax=Agrobacterium vitis S4 RepID=B9JX79_AGRVS Length = 324 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 77/277 (27%), Positives = 138/277 (49%), Gaps = 3/277 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD D+LRTFVA++++ +F AAA V RT SAVS Q+++LE +G LF R R+ LT H Sbjct: 34 LDNDVLRTFVAISEVGSFTAAADMVFRTPSAVSMQIKKLEDQLGVSLFRRDARSVTLTPH 93 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LL YA++IL N+EA + + + GV+ +G+ D+ + +LP +L ++ +P LA+ Sbjct: 94 GALLLSYAKRILALNNEAVARFLAPEMNGVVRLGSPDDIGELVLPGILTHLARTWPHLAI 153 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPS--AFKALNLRTSPTHWYCAAEYILQKGEPIP 188 +V + + + + + + +D+ + A + + + W P+P Sbjct: 154 EVTIAGSVELRKAVNEKRLDVTLFNFLNGIAADPTMTVMSEKLVWAGKKHGQAHLKTPLP 213 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L + D+ +R + L + +R+AY AA++A + V ++ D+ Sbjct: 214 LSVWDESCVWRKRAMTELTRRGKEFRIAYFCGHHVGQYAAIRADIAVAPLARFLLQEDMV 273 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 L+ DGLP L E L + + + + + Sbjct: 274 ELTERDGLPDLGSYEVGLAVCEDA-SPPVKAVADYVR 309 >UniRef50_Q167A0 Transcriptional regulator, LysR family, putative n=4 Tax=Rhodobacterales RepID=Q167A0_ROSDO Length = 297 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 78/262 (29%), Positives = 123/262 (46%), Gaps = 1/262 (0%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 INL +LLR F+ V ++ +F AA + RTQ A+S Q++RLE+ VG L R G+ LT Sbjct: 7 INLPTELLRAFITVVEVASFTRAAEILGRTQPAISLQVKRLEESVGCTLIERKGKEISLT 66 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 E G L +AR+ILR ND A + N L +G + A L L V Y + Sbjct: 67 ERGEALAIHARQILRLNDLAMAQFERPNPLAKLRVGLPVDYAVNTLQSCLTDVVKQYSDI 126 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNL-RTSPTHWYCAAEYILQKGEPI 187 +++R + ++ + S ++D+ V + L W A ++ + I Sbjct: 127 QIEIRCDLSKHLLSAMRSNDIDIAVALFDGDDQQFLFRNWKEQPTWVGATDFEICDQADI 186 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PLV+ +RD + L A WR+AY + + ++ AV+ GLG++ + + Sbjct: 187 PLVVHPYGCVYRDRMATALKLAGKSWRIAYSSPGIGGLQRAVQDGLGLSCLTAPTVQSGM 246 Query: 248 RVLSGVDGLPPLPDTEYLLCYD 269 R + DGLP LP L Sbjct: 247 RKFTEQDGLPVLPPLHIGLFAR 268 >UniRef50_B9JHY5 Transcriptional regulator protein n=2 Tax=Agrobacterium RepID=B9JHY5_AGRRK Length = 298 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 85/288 (29%), Positives = 138/288 (47%), Gaps = 1/288 (0%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + NLD D L +FVAVA+ +F AAA + RTQ+AVS + + E+ + LF R R L Sbjct: 1 MRNLDSDALASFVAVAETGSFTAAAERLGRTQAAVSMAIGKWEERLDLRLFDRGHRRVTL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G +LLGYAR+I DEA ++L+ + + +G D+ L+ R PK Sbjct: 61 TPIGERLLGYARRIRAIEDEALATLLEGRNESRVRLGMPDDYLTLFGTALMQRFVPQCPK 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 ++LD++ + + M+ES+E+D+ + T K +R W AA+ ++ I Sbjct: 121 VSLDLQYDFSHRLEYMVESRELDIAIITQNAVEPKGEIIRLEKQVWCAAADRYPERENCI 180 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 L L + R VL+ L++AD WR+ Y +S + ++ AV +G +T P + Sbjct: 181 QLALFPEGCRARPQVLSALDRADRRWRIVYSSSDIAGIQLAVHSGDLLTVLPESAVPASW 240 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSP 295 R L DG+P LP + P + + + + P Sbjct: 241 RKLGPEDGMPELPTLRLAMVL-PQQPRLPVRQLATFLRAEFQRSLVEP 287 >UniRef50_A9GYT7 Transcriptional regulator n=4 Tax=Rhodobacteraceae RepID=A9GYT7_9RHOB Length = 299 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 78/282 (27%), Positives = 133/282 (47%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + NLD DLLRTF+AVA + AA + R+QSA S Q++RLE ++G+ +F RHGR +L Sbjct: 1 MENLDSDLLRTFLAVAQAGSVTDGAARIHRSQSATSIQVKRLEAILGRSVFDRHGRGVVL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 +E G +LL A+ + D + + G L +G D+ L +++ + +P Sbjct: 61 SETGRRLLPVAQDVTARLDVTLREISQCAVSGQLHVGIPDDHGRAKLVEIISAFTRHHPG 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + L V + LE +DL + + L PT W + GE + Sbjct: 121 VELVVTCALSTEFPNALEKGALDLAIYEVEHPKPQEEVLFEDPTCWMTSTHRDFPTGESL 180 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 P+ L D +RD+ +A+L P+R+AY + ++ V AAV+AG+ V + L Sbjct: 181 PVALFDHACWWRDVAIASLEARGKPYRIAYSSQSVSGVIAAVEAGIAVGLLGRSSLHSGL 240 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 + G P ++ ++ + +L + +A+ S Sbjct: 241 AAVDENLGFGSTPASKLVMAARGAKETQLQAAMKEAVRSAFQ 282 >UniRef50_D0ZAY7 Transcriptional regulator, LysR family n=3 Tax=Enterobacteriaceae RepID=D0ZAY7_EDWTE Length = 257 Score = 253 bits (646), Expect = 8e-66, Method: Composition-based stats. Identities = 147/241 (60%), Positives = 180/241 (74%) Query: 46 MQRLEQLVGKELFARHGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGA 105 MQRLEQLVGKELFAR GRNK LT+HG+QLL YARKILRFNDEAC SL+ +LQG L +GA Sbjct: 1 MQRLEQLVGKELFARQGRNKYLTDHGVQLLNYARKILRFNDEACHSLINDHLQGTLVVGA 60 Query: 106 SDESADTILPFLLNRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALN 165 +D+SAD+ILP LL R +++YPKLA+DVR++RNA + ML EVDL V+T + + Sbjct: 61 TDDSADSILPQLLGRFTALYPKLAIDVRMQRNADIQLMLLDNEVDLAVSTGCEPSLPSTL 120 Query: 166 LRTSPTHWYCAAEYILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAV 225 LR SPT W+CA +Y G PI LV+LD+PS FR + A L+ A +PWRLAYVASTLPA+ Sbjct: 121 LRRSPTVWFCATDYDFTPGVPIELVVLDEPSAFRSLATAALDAAGLPWRLAYVASTLPAL 180 Query: 226 RAAVKAGLGVTARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 RAA+KAGLG++ARP+EMMS LRVL DGLP L DTEY LC P N LA ++ A+ Sbjct: 181 RAALKAGLGISARPIEMMSSSLRVLGEADGLPRLADTEYSLCLAPQCRNPLAVTLFDALR 240 Query: 286 S 286 Sbjct: 241 E 241 >UniRef50_B9R5T3 LysR substrate binding domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R5T3_9RHOB Length = 303 Score = 253 bits (646), Expect = 8e-66, Method: Composition-based stats. Identities = 84/279 (30%), Positives = 144/279 (51%), Gaps = 4/279 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D+DL RTF+ +A+ ++F+ A+ + RT SAVS Q+++LE ++G +FAR GR LT Sbjct: 12 IDMDLYRTFLVIAETSSFSKASDLIGRTPSAVSMQIKKLETILGVAVFAREGRAVRLTPE 71 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LLGYAR+IL N+EA S + +++G + GA + LP L+R + +P + + Sbjct: 72 GEALLGYARRILMLNEEAVSLFVSPSVEGEVRFGAPADFGTRFLPNFLSRFARSHPGVNV 131 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKAL---NLRTSPTHWYCAAEYILQKGEPI 187 DV + ++ + + + E+DL+++T RP + + P W I +P+ Sbjct: 132 DVHLDGSSALDDKIRKGELDLVLSTVRPGVPMPTGTDVVFSEPLVWVGLEGGIAYDRDPL 191 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL + P+R L+ A P+R++Y + AA+ A L V P ++ P L Sbjct: 192 PLAVSTPGCPWRRAARIALDGAQKPYRISYTSFHSAGQEAALLADLAVAPFPASVVEPPL 251 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 +VL GLP + D ++ P + + +E Sbjct: 252 QVLDDRHGLPKIGDYHIVMKQRPRAG-RATHAFAEHVEE 289 >UniRef50_Q393B8 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=Q393B8_BURS3 Length = 296 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 80/273 (29%), Positives = 130/273 (47%), Gaps = 2/273 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDLDLL FVAVA+ +F AAA V R+QSAVSQ++ RLE +G +F R R+ LT+ Sbjct: 2 LDLDLLHAFVAVAETGSFTAAADVVGRSQSAVSQKVLRLEDALGVRVFERTSRSLRLTQE 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G ++L R++L D L L +G S+ LP +L R +P + L Sbjct: 62 GERVLAGGRRLLAQYDAFMHELREPPQVERLRLGVSENLVHAQLPRILARFGERFPAVQL 121 Query: 131 DVRVKRNAYMAEMLESQEVDLMVT--THRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 ++ + + + + +D+ H + + + P W A Y G P Sbjct: 122 ELVTGSSPELVDAHRAGLLDVFFARQKHDGAPVRGRVIWREPLVWLAAKNYRNDPGRPAR 181 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 LV++ P +R+++ +L+ A W + AS L V+AAV GLGVTA + ++ Sbjct: 182 LVMMPPPCAYREVMTESLDAARREWSVGCTASNLVGVQAAVAGGLGVTALGKSFLQAGMK 241 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIY 281 +L P LP +E + + + + + + Sbjct: 242 ILPTSAQWPALPASEVAVIGEDPATQPVVEPLV 274 >UniRef50_A8ILZ3 Transcriptional regulator n=2 Tax=Xanthobacteraceae RepID=A8ILZ3_AZOC5 Length = 305 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 99/294 (33%), Positives = 140/294 (47%), Gaps = 1/294 (0%) Query: 5 NRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRN 64 + I NLDLDLLR+F AVA+L + +AAA + RTQSAVS QM RL + +G + R GR Sbjct: 13 SMSIKNLDLDLLRSFAAVAELGSISAAAQRIGRTQSAVSLQMDRLAEQLGFPVVERKGRG 72 Query: 65 KLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSV 124 LT G L AR++L ND + S L +G + A++ L +L R+ S+ Sbjct: 73 VALTPRGAAFLDDARRLLDLNDRVLGHHLRSGFSEPLRLGFVQDVAESALQRILARLGSL 132 Query: 125 YPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKG 184 +P + VRV M E L E+DL + + W A L Sbjct: 133 FPGAPITVRVCSTNTMIEKLRIGELDLAAGYRVETDVPTRLIMREQMCWIGARSLRLNPE 192 Query: 185 EPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMS 244 EP+PL++ + P FR ++ L A +R+A + +LP V AAV AGLG+T R + Sbjct: 193 EPVPLLMFESPCIFRSAAISALTAAGRSFRIALTSPSLPGVMAAVGAGLGITLRSARSLR 252 Query: 245 PDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSA 298 PDL + + G PLP EY L + I Q +E + A Sbjct: 253 PDLMTIGDL-GTQPLPHFEYALYSRAENRLPALDQIEQVIEEELRRERPLFAVA 305 >UniRef50_Q13JW6 Transcriptional regulator, LysR family n=5 Tax=Proteobacteria RepID=Q13JW6_BURXL Length = 283 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 84/281 (29%), Positives = 133/281 (47%), Gaps = 8/281 (2%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELF--ARHGRNKLLT 68 LDL+LL T + V D +F A V RTQS VSQQ+++LE+LVG+ L R G T Sbjct: 2 LDLELLNTLICVVDEGSFTRAGERVHRTQSTVSQQVRKLEELVGRTLLLRDRTGNQVTAT 61 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 EHG L YAR++L EA +L+ + IG ++ + +L+ P + Sbjct: 62 EHGELLAQYARRLLALAQEAQDALVSDVELTPVRIGVPEDFDARRMSAMLSGFVKAKPGV 121 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQK---GE 185 L+ + + L + E+++ + P + + L W L + E Sbjct: 122 RLETVAGMSVDLQRKLAAGEIEIALVKREPGSGECLASWPESLVWVRGGNVELPEESADE 181 Query: 186 PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSP 245 PIPL L +R + +L+KA WR+A+ + +L ++AAV +GLGV+ P + P Sbjct: 182 PIPLALFPHGCVYRQRAIRSLDKALRRWRIAFGSQSLTGIQAAVSSGLGVSVLPTSAVLP 241 Query: 246 DLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 + R+ GLP LP TE L N L + + + + Sbjct: 242 EHRL---CAGLPQLPPTELALVTSGGVLNALQLALVEFLRA 279 >UniRef50_C4X8P7 NADH dehydrogenase transcriptional regulator n=9 Tax=Enterobacteriaceae RepID=C4X8P7_KLEPN Length = 341 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 89/294 (30%), Positives = 146/294 (49%), Gaps = 6/294 (2%) Query: 5 NRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRN 64 + + LDLD LR+FV + +FA AA + R+ SAVS Q+++LE G L + GR+ Sbjct: 50 EKRLPGLDLDALRSFVTGMECGSFAQAALRLSRSTSAVSAQLKKLESQCGTALVTKQGRH 109 Query: 65 KLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSV 124 +LT G +LL YAR++L NDE +L L G + +G ++ ++++P +L + Sbjct: 110 LVLTAEGEKLLSYARRLLALNDETLRALQGERLTGEIHLGMQEDFGESLMPGILGQFKRH 169 Query: 125 YPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEY----I 180 +P++ + RV RN + + L + +DL + L L P W + + Sbjct: 170 HPQVRIVARVDRNGPLRQALAEEALDLALLWQTEDQGPGLGLC--PLAWIAHPDLDIRAL 227 Query: 181 LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 L GEP+PLV+ D P R +A L+ A IPW++ +V+ +L + AAV+AGLG+T R Sbjct: 228 LVSGEPLPLVMFDSPCLMRSRAIACLDAAGIPWQVVFVSHSLSGIWAAVQAGLGLTIRTR 287 Query: 241 EMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYS 294 M +LR G+ P S++ ++ + M W Sbjct: 288 IGMPGNLRPAGGLLPAPGSLAVSLRQTPREESHSAAVALLGELMTEALQGWLDR 341 >UniRef50_Q141J0 Transcriptional regulator, LysR family n=7 Tax=Burkholderia RepID=Q141J0_BURXL Length = 311 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 92/281 (32%), Positives = 142/281 (50%), Gaps = 3/281 (1%) Query: 2 ISANRPII--NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFA 59 + +R ++ +LD LLRTFV VA+ AA + RTQ+AVS Q++RLE +G+ L Sbjct: 1 MPTSRTLMSRDLDSSLLRTFVTVAETGAMGVAATRLARTQAAVSMQLRRLEDELGQRLLD 60 Query: 60 RHGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLN 119 R R LTE G LL YA IL +A +L + G + +G ++ A LP L Sbjct: 61 RSPRGVQLTEAGHLLLPYAHAILGAGADARRALSAGQVSGTVRLGMLEDIAVGRLPRALR 120 Query: 120 RVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEY 179 R S YP++AL++ V + ++ L +D++V L P W A + Sbjct: 121 RFSIAYPQVALEIVVDSSVALSNRLADSSLDVVVGDPALVDAAPLLTWRQPLFWVGARGF 180 Query: 180 ILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARP 239 + P+P+V ++ VLA L +A I WR+ +++LPAV++AV+AGLGV+ Sbjct: 181 GREVEAPLPVVAFGGACLWQQQVLAALRRAGIAWRIVCTSTSLPAVQSAVEAGLGVSVLL 240 Query: 240 VEMMSPD-LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQV 279 + + +RVL DGLP P ++ L + A V Sbjct: 241 DGNIRSESMRVLGQADGLPDAPTADFGLFTREVPGAQAAAV 281 >UniRef50_Q3JTX1 Transcriptional regulator, LysR family n=37 Tax=Burkholderia RepID=Q3JTX1_BURP1 Length = 367 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 90/278 (32%), Positives = 143/278 (51%), Gaps = 4/278 (1%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + L +LLR+FVAVA +F AA+ V +QS VSQ ++RLE+L+ + LF R RN L Sbjct: 86 MRPLPPELLRSFVAVAQTGSFTAASERVSLSQSTVSQHIRRLEELLDRPLFERDTRNVRL 145 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 G L YA +IL DEA +S+ L G + +G S++ A T L L P+ Sbjct: 146 APSGEALFRYAVRILALMDEAVASVCGPPLSGKVRLGLSEDFALTHLTAALASFVQRNPE 205 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEP- 186 + L++ + + + L++ DL+ + + +RT P +W L EP Sbjct: 206 VELEIATGLSGDLFDALDAGRHDLVFAKRIAGSRRGRVIRTEPLYWCAGPASPLTGREPV 265 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +PL L PS R VL TL+ P+R+A ++++ +RAA AGLG++A ++ Sbjct: 266 LPLALHPQPSVSRQRVLETLDAIGRPYRIAVASTSIAVLRAAASAGLGISAFAGYVIPHG 325 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 L L GLPPL + EY++ P++ + A + + Sbjct: 326 LAKLEA--GLPPLGELEYVI-DRPANASRPALALEATL 360 >UniRef50_C1DJQ4 LysR family transcriptional regulator protein n=2 Tax=Bacteria RepID=C1DJQ4_AZOVD Length = 317 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 85/278 (30%), Positives = 130/278 (46%), Gaps = 3/278 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 LD+ LLRTF+ V D FA AA + T SAVS ++RLE G L AR R LT+ Sbjct: 27 TLDIVLLRTFLEVVDSGGFALAAERLALTPSAVSGHIKRLELAAGDTLLARTTRRLDLTQ 86 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G L YAR I+ EA + L S +QG L +GAS++ A T LP +L +P+ + Sbjct: 87 AGETLYAYARNIVDLEREARARLRGSTIQGRLRVGASEDFAGTWLPQVLQGFHRWHPQAS 146 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRP-SAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 ++++V A + E +D++ + + L P W A+ E +P Sbjct: 147 IELKVGITADLLRQQERGHLDVVFGKRCSRTNGEGELLWREPLVWAYASACAADLAEALP 206 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L + +P +R+ LA L PWR+ + + ++ +A AG VT + LR Sbjct: 207 LAVFPEPCIYREAALAALGSVARPWRVVFESGSMAGCLSAALAGFAVTVVARSQLREGLR 266 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 L + LP LP + N A+ + +A+ S Sbjct: 267 ELGEEERLPALPAACFYAF--SPRTNPAARALIEAVRS 302 >UniRef50_A9BWM0 Transcriptional regulator, LysR family n=6 Tax=Proteobacteria RepID=A9BWM0_DELAS Length = 300 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 77/271 (28%), Positives = 134/271 (49%), Gaps = 4/271 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +L +D LR VAV D + +AAA + R+Q+AVS Q+++LE +G+ + R R+ LT Sbjct: 9 DLQIDWLRALVAVVDAGSLSAAAPLLHRSQAAVSMQIKKLETALGQPVLLRGPRHLQLTP 68 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LLGYAR++L +A ++L +L G + +G D+ A T L +L + Y + Sbjct: 69 AGAELLGYARRMLELQAQAQAALFGPDLSGRVRLGVPDDYASTYLTPVLRSFAGRYQGVE 128 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 +++ +++ + + +DL + + R + L P W A ++ + + P+P+ Sbjct: 129 IELTCEQSTALIPQVVRGTLDLALVS-RDRPQRGRLLFHEPLVWVGAPQHEVWRKNPLPI 187 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 + + S R L++L R+ Y +S+L AAV++GL V + P L+V Sbjct: 188 AVYEAASLARTAALSSLAAQRRAHRVVYHSSSLAGQLAAVESGLAVAVFTRCSVPPHLQV 247 Query: 250 ---LSGVDGLPPLPDTEYLLCYDPSSNNELA 277 L LPPL E +S A Sbjct: 248 LQNLPAGFELPPLVSMEVSALRSKASQGSAA 278 >UniRef50_Q0BQ99 Transcriptional regulators, LysR family n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BQ99_GRABC Length = 300 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 142/290 (48%), Gaps = 8/290 (2%) Query: 1 MISANRPIIN---LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKEL 57 M+ +P +N LDLDLLR F VA F AA + TQSA+S +++RLE L+ + + Sbjct: 1 MLPQEQPEVNYPDLDLDLLRCFACVAAERGFTAAGQVMGLTQSAISLKIKRLEDLINRRV 60 Query: 58 FARHGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFL 117 F R R+ LT G LL YA ++L NDEA L+ S ++G L +G +D L + Sbjct: 61 FDRSSRHLALTPDGDILLAYAHRLLSLNDEAVRRLVASPIKGHLRLGVADHFLPHHLAQI 120 Query: 118 LNRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAA 177 + R YP + L++ V R A + + DL++ R + + T W A Sbjct: 121 VGRFQRTYPAVRLEIEVGRCAELRTACDEGRFDLVIGRRRAGDTMGMPIWTETMVWVAAN 180 Query: 178 EYILQKGE-PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 ++ + + + P+PL L FR+ L L++A IP L Y +++L + A + GL + Sbjct: 181 DFRMPERDKPLPLATLSTGCMFRERALDVLSRARIPHELRYTSTSLLGIIAFAQEGLCII 240 Query: 237 ARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNN-ELAQVIYQAME 285 + L+ + D LP L ++E + D S N ELAQ + Sbjct: 241 PIGRSNVPSGLKEI---DSLPVLGNSEIAVFGDISDENLELAQPLIDLFR 287 >UniRef50_Q1ZUY1 Transcriptional regulator n=3 Tax=Vibrionaceae RepID=Q1ZUY1_PHOAS Length = 289 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 94/285 (32%), Positives = 150/285 (52%), Gaps = 8/285 (2%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + +LDLD LR FV +L +FAAAA + R+ SA S Q+++LEQ L + GR+ Sbjct: 1 MRSLDLDALRCFVLGIELGSFAAAAERLNRSPSAASAQLKKLEQQCNTSLVTKIGRHLEP 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 TE G +L YAR++L+ NDEA + L+ ++L G + G ++ +D +LP LL S +P Sbjct: 61 TEAGEIILAYARRMLQLNDEALNQLVENSLTGKVVFGLQEDFSDVLLPQLLGVFSRSHPN 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTH-RPSAFKALNLRTSPTHWYCAAEYILQK--- 183 L L V R+ + + ++S E+D + SA + L P +WY A L++ Sbjct: 121 LQLQSIVGRHQELMDGIQSGELDFSLGWRGEKSAPYSELLAELPLYWYGPANKYLKESIN 180 Query: 184 -GEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEM 242 +P+PLV+LD R +A L++ IPW++ +V +L + +AV AGLGVT R Sbjct: 181 ISKPVPLVMLDGSCIIRQQAIAALDRKGIPWKITFVGRSLSNLWSAVDAGLGVTVRSSFS 240 Query: 243 MSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 + L DGLP L L + ++ + +Y ++ Sbjct: 241 HPDTISKL---DGLPVLGKLRLCLDRNQYKLEKVQEQLYDELKQQ 282 >UniRef50_B5ZG57 Transcriptional regulator, LysR family n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZG57_GLUDA Length = 291 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 84/287 (29%), Positives = 140/287 (48%), Gaps = 5/287 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +LD LR+F+AVA+ F +AA + QS VSQ + RLEQ V + L R + LT+ Sbjct: 6 DLDPQQLRSFLAVAETLHFTSAARRLGIVQSTVSQHVSRLEQAVNRTLLVRSTKQVTLTQ 65 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G ++ AR IL D A + S ++G + +G S++ T LP +L YPK+ Sbjct: 66 DGHMMIALARDILSAQDRALTWFDRSVIRGYIRLGISEDLTMTRLPEILGIFREKYPKVD 125 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 + +RV + + L++ VDL+ T R + + P W+ + G +PL Sbjct: 126 VHLRVGLSGSLQNDLDTGSVDLLCTKRRIGDARGTTIWREPLTWFG----NWEPGTALPL 181 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 V+ +P+ R + L LN A+IPW +A+ + L A+ AAV+AG GVTA+ + D R Sbjct: 182 VVFPEPAITRQLALECLNAAEIPWYVAFTSENLTALLAAVRAGYGVTAQSSFLRQYD-RS 240 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPM 296 L + LP D ++++ + + + + ++ Sbjct: 241 LPVTENLPETADVDFIVIGKTEALEGPVKALADTIAAHSRQITPRTT 287 >UniRef50_B2IKY9 Transcriptional regulator, LysR family n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IKY9_BEII9 Length = 291 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 88/287 (30%), Positives = 138/287 (48%), Gaps = 3/287 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD DLLR +V+V + + AA R QSA+S QM+RLE L+GK L R GR + T Sbjct: 6 LDPDLLRAYVSVCRHGSLSRAAEQAGRAQSALSMQMRRLEDLLGKRLLRRTGRGVIPTTE 65 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LGYA +IL +E + L + + IG ++E A +LP L ++ +P L L Sbjct: 66 GELFLGYATRILSLGEEVVARLGEQSTSDPIRIGLAEEIAIIVLPEALGQLRRAWPDLHL 125 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 D+ V + +++ E+DL V T A A+ W + P+ ++ Sbjct: 126 DIVVDHSIAISDRWREGELDLAVATCLAFAGDAVRSWDVELLWIGGIDCEPDPAHPLDII 185 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD-LRV 249 + +P +R +L L + RL + ++ A+RA V++GLGV E + P+ +RV Sbjct: 186 VYAEPCIWRRRMLEALTEIGRDHRLTLTSQSISAIRAGVESGLGVALMTAECVRPEKMRV 245 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM-ESYHNPWQYSP 295 L G+PP +Y L Y P N + + + + S W P Sbjct: 246 LPTSAGVPPPLIVQYGL-YAPDRPNVVTKAAIELLARSLQARWSNFP 291 >UniRef50_A1WMH7 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WMH7_VEREI Length = 306 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 92/298 (30%), Positives = 137/298 (45%), Gaps = 3/298 (1%) Query: 14 DLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQ 73 +LLR FVAV + N + AA + RTQ+AVSQQ+ RLE +G +LF + R L+ G Sbjct: 10 ELLRAFVAVVECNGYTPAAHYLHRTQAAVSQQISRLEDCIGADLFEKPTRQLKLSGQGKV 69 Query: 74 LLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVR 133 LLGYAR++L N+EA L + G + +GA++ A T+LP LL S +YP + +D+ Sbjct: 70 LLGYARRLLALNNEAMEKLRPGIVSGAVRMGATNCYATTVLPLLLAEFSELYPAIHIDLE 129 Query: 134 VKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLVLLD 193 V M L DL + + + LR P W + PIPL +L Sbjct: 130 VGVAEEMQRKL-GPAFDLTINAFQGGEGNGVLLRKDPVVWAMSHRARPHLKTPIPLAVLP 188 Query: 194 DPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMS--PDLRVLS 251 S R L A W + +S++ ++A V AGL V + P LR+L Sbjct: 189 QGSLLRRWAQEALTAAGRRWVVVQESSSVEVLKACVLAGLAVGGFQDSTVRAAPGLRLLL 248 Query: 252 GVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPEGDDSLLIER 309 +G P LP TE L A+ +Y+ + PW+ + + + Sbjct: 249 PEEGFPTLPSTEMWLERADRELPRAAKCLYEFLLEQLPPWEVQESALASDSAGEIAQG 306 >UniRef50_B5WKB1 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=B5WKB1_9BURK Length = 306 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 85/281 (30%), Positives = 134/281 (47%), Gaps = 3/281 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 NLDLDL+RTFVAVAD + AA + TQ AVSQQ++RLE ++ LF R R L+ Sbjct: 14 NLDLDLVRTFVAVADSGSMTVAANLLHMTQGAVSQQVKRLEDVLDCLLFVRKTRRLELSR 73 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G L AR++LR NDE + + L+G L +G + T L + + P + Sbjct: 74 QGELFLVKARQLLRLNDEIWADMNVQPLRGALRVGVPYDLV-TRLAPAMKTFAEANPHVD 132 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 + + + +++ + S +D+ + + S + + P W + P+PL Sbjct: 133 ISLVCGTSPELSDAVNSGRLDVSLVEYVASEAQGEVVCIEPLVWVKGRGSDAWQKRPLPL 192 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 ++D+ FR +VL L I WR + + + A A V+AGL +TA V + DL Sbjct: 193 SMVDERCAFRPVVLGVLADEGIAWRTVFESGNIEATAATVRAGLAITAWLVSTVPADLET 252 Query: 250 LSGV-DGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 L+ GLP LP L P++ AQ + + + Sbjct: 253 LTPRVAGLPALPPFAICLRL-PATVQPAAQEFARHVRDSMS 292 >UniRef50_B2II45 Transcriptional regulator, LysR family n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2II45_BEII9 Length = 287 Score = 246 bits (630), Expect = 5e-64, Method: Composition-based stats. Identities = 68/277 (24%), Positives = 131/277 (47%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD L+TF+ +A+ ++F+ + QS VS +++LE+++G +LF R + LT Sbjct: 2 LDPLHLQTFLHIAEGHSFSETGRRLGIRQSTVSDHVRKLEEILGHQLFVRDTHHVTLTLE 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L+ +A IL D A + L+G L +G +++ + LP +LN +P++ L Sbjct: 62 GEALVAFATGILAAQDRALRHFAGTKLRGRLRLGVTEDLILSWLPQILNDFVQKHPQIDL 121 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 + + + + ++ E+DL++ + L W A + + L+ Sbjct: 122 SFTIALSNVLIQRFDAGELDLVLCKRWAGEERGELLWRDQVVWVGANPAPISANGQLLLI 181 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 L PS R M L+ L A I W +A + +L V AA +AG+G+ A ++ L + Sbjct: 182 LYPAPSLTRFMALSALESAGISWHIACTSDSLSGVVAAARAGMGIFAHSRSLIPSGLVEI 241 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 + GLP L + ++++ + + +A+ + Sbjct: 242 TSSHGLPKLNELDFVMLSANPRYHASIGELTEAIRLH 278 >UniRef50_Q13GF3 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13GF3_BURXL Length = 289 Score = 246 bits (630), Expect = 5e-64, Method: Composition-based stats. Identities = 80/282 (28%), Positives = 146/282 (51%), Gaps = 3/282 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 L L+LL+ F++VA+ ++F A + + RTQSA+S +++RLE+++G +F R G++ LT+ Sbjct: 2 LHLNLLQVFISVAENSSFTLAGSEMHRTQSAISMKIKRLEEILGVPVFERSGKSIELTKE 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L ++R+IL+ DEA S++ V+ +G ++ A +P +L +P + + Sbjct: 62 GAIFLTHSRRILQLVDEAMSAVGAVRKSNVVRLGCVEDYAVRTIPKILVDFWVEHPDVHI 121 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 ++ +A + + L + D+++ H ++ + + T W +A + EPIP+ Sbjct: 122 EMGTGDSASLLDRLGD-DFDVVLAEHPLNSGEGEVVCTDSLVWGASANHSPHLQEPIPVA 180 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 + R + LN A PWRLA +++ + ++ AV AGL V ++ L L Sbjct: 181 FRSQGALERQWACSALNAAGRPWRLACLSAGIGTLQTAVDAGLAVGVFKASTLAGALNRL 240 Query: 251 SGVDGLPPLPDTEYLLCY--DPSSNNELAQVIYQAMESYHNP 290 + D P LPD E L D S + Q++ + ES P Sbjct: 241 TPADNFPQLPDVEMALHVMNDGFSQPSIMQLVKKLRESLQRP 282 >UniRef50_Q5QVA7 Transcriptional regulator, LysR family n=2 Tax=Idiomarina RepID=Q5QVA7_IDILO Length = 280 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 70/275 (25%), Positives = 134/275 (48%), Gaps = 6/275 (2%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + +L L+ LR+F AV +L + A + R+Q A+S Q+++LEQ +G EL R G L Sbjct: 1 MKHLSLEALRSFSAVIELGSMTLAGERMGRSQPAISLQLKKLEQQLGVELLTRQGSGFAL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G L YA+++L ND+A + + G + +G + E A ++LP +L + + VYP+ Sbjct: 61 TADGDVLFDYAQRMLALNDQAWAQFEPQQVSGKVRLGITSEFASSLLPKVLGQFAQVYPQ 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + L V + + L Q+ D+++ + + ++ W + Q G Sbjct: 121 VTLQVTSALSKDLLSGL-GQQFDIILALREQTNKSDVLIQREELVWVGLPGLLEQPG--W 177 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 P+V+ + +R +L +A P+R+ Y + + AA+ +GLG+T + D+ Sbjct: 178 PMVVAPEGCIYRRRAEQSLQRAHQPYRITYTNTDFSGLTAALNSGLGITVLAKSTVPKDI 237 Query: 248 RVLSGVDGLPPLPD---TEYLLCYDPSSNNELAQV 279 +L PLP+ ++ +++ +Q+ Sbjct: 238 PILESFSDNKPLPNPGSVNVIMRLAGGASSAASQL 272 >UniRef50_A0KR40 Transcriptional regulator n=5 Tax=Gammaproteobacteria RepID=A0KR40_SHESA Length = 282 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 86/283 (30%), Positives = 145/283 (51%), Gaps = 5/283 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++++ LR+FVA D +F AA +TQSAVS QM+RLEQ +GK LF + GRN +L+ Sbjct: 1 MEIEALRSFVAFVDTGSFTRAAMQTYKTQSAVSMQMKRLEQELGKTLFVKEGRNLVLSTE 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G + YA+++L+ +DE +++ + + L +G D+ A+++LP ++ + +L L Sbjct: 61 GQRFGLYAKQLLQLHDETVTTIKQTQVGAQLHLGCPDDYAESVLPRIVALLHGHIKQLDL 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 + + + ML+S ++D + T P + + L+TS W A+ L +P+P+ Sbjct: 121 QITCASSQKLRIMLDSGQLDAAIVTRLPESDEGYLLQTSKGVWVSASGSNLSDADPLPIA 180 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 L F L L K D ++L +S+ A+ A V L ++A +S L ++ Sbjct: 181 LFQKDCKFHIAALDGLMKQDRHYQLLACSSSAAALNAIVAKNLAISAMAECSVSAPLNII 240 Query: 251 SGVDGLPPLPDTEYLLCYDPSS----NNELAQVIYQAMESYHN 289 LPPLP L + N ELA+ I QA + Y Sbjct: 241 DSG-TLPPLPVVAVALVISAKAYSPINAELAKQIAQAYQGYLE 282 >UniRef50_C0Z518 Transcriptional regulator n=3 Tax=Paenibacillaceae RepID=C0Z518_BREBN Length = 295 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 76/275 (27%), Positives = 115/275 (41%), Gaps = 14/275 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L TF VA +F AA + Q V+ QMQ+LEQ G LF R+GR LT+ Sbjct: 1 MELVYLHTFREVARYGSFTRAAEELGYAQPTVTAQMQKLEQSYGAPLFERYGRKLRLTQA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LL YAR+++R E+ + G + IG D A LP L YP++ L Sbjct: 61 GEALLPYARELIRLYGESKEVIKHQT-TGPIAIGTIDTLAAFFLPPYLQAFCQQYPQVDL 119 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKAL---NLRTSPTHWYCAAEY-------- 179 +R A + + + +D + RP L +R + Sbjct: 120 VLRTAGEAEIVQQIRDGYLDFGIIFDRPCTDPELVTHVIREEELVVVMPPAHRFTTATAL 179 Query: 180 ILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARP 239 + PLVL ++ +R M+L +A + R+A S A++ V+ GLGV P Sbjct: 180 TVHDLGGEPLVLTEEGCTYRGMLLEAFGEAGMTQRIACQFSNPEAIKQCVRCGLGVALLP 239 Query: 240 VEMMSPDLR--VLSGVDGLPPLPDTEYLLCYDPSS 272 V + +L VL+ + P L Y Sbjct: 240 VMAVQRELAEGVLTAIPFQSDKPPFSIQLVYHKKK 274 >UniRef50_Q1LFN3 Transcriptional regulator, LysR family n=15 Tax=Burkholderiales RepID=Q1LFN3_RALME Length = 298 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 81/276 (29%), Positives = 131/276 (47%), Gaps = 1/276 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 L+ ++TF VA +F A + +QS+VS ++RLE V + LF R + LT Sbjct: 15 LNPVWIQTFATVATARSFTDAGRQLGLSQSSVSDHIRRLEGSVSRRLFVRDTHSLALTPD 74 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LL +AR IL A S LQG + +G S++ A LP +L + +P + L Sbjct: 75 GEALLVHARLILESLARAESQFSGPRLQGRVRLGTSEDLAQGPLPNVLAAFRATHPDVEL 134 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 ++ + + + E +E+ +DL+V R + + L W ++ +P+PL+ Sbjct: 135 EITIGMTSKLYEWMEAGTLDLIVGKRREGERRGVPLFRGRLEWLARPGTVVDVRQPLPLI 194 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 L+++PS R +VL TL K WR+ +S+ AA + GLG+T R + L Sbjct: 195 LVNEPSVTRSVVLDTLAKNGWRWRVVCTSSSHSGCIAAARGGLGITVRAENLTGGGLVPP 254 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 D LP LPD E+ + E A + Q + Sbjct: 255 VNFDALPALPDVEF-ITLAARRLTEPADTLLQLIRK 289 >UniRef50_A4WYH8 Transcriptional regulator n=11 Tax=Alphaproteobacteria RepID=A4WYH8_RHOS5 Length = 288 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 83/285 (29%), Positives = 136/285 (47%), Gaps = 1/285 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDL LR+F+AV D +F+ AA + QS VSQ ++RLE +G+ LF R T Sbjct: 2 LDLGQLRSFLAVHDTASFSLAATRLGLAQSTVSQHVRRLEDHLGRRLFDRDTHRVAPTAA 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LL AR +L +D + + S L+G L G S++ + LP +L S+ P + L Sbjct: 62 GEMLLAEARALLEISDRLEAQFLQSRLRGRLRFGLSEDMVNGPLPSILRGFSAANPSVDL 121 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 ++ V +A + E +DL++ R + + P W ++ + P+PL+ Sbjct: 122 ELTVALSAALFAEQEMGRIDLVLAKRRLGDDRGHVVAREPLVWLARDPDLVARWRPLPLI 181 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 PS R L L +A +PW ++ S+L + AA +AG+GV +P + LR + Sbjct: 182 SFPAPSITRAAALDALEQAQLPWLISCTCSSLSGLTAAARAGMGVFVQPRGLTPEGLREV 241 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSP 295 D LPPL E++L ++ L + + + +P Sbjct: 242 PA-DMLPPLETVEFVLVERRGADRALMAALTREILRQTGRQPPAP 285 >UniRef50_B0UBR3 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UBR3_METS4 Length = 296 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 86/296 (29%), Positives = 142/296 (47%), Gaps = 6/296 (2%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR-HGRNKL 66 ++N+D+DLLRT +AVAD F A + RTQSAVS Q++RLEQ+VG+ L R GR Sbjct: 3 LVNVDIDLLRTLLAVADAKNFTLAGERLLRTQSAVSLQVKRLEQVVGQRLVERGSGREIR 62 Query: 67 LTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYP 126 LTE G + YA +IL+ ND + VL +G D+ A ILP ++ +S Sbjct: 63 LTEAGEMVRRYAIEILKLNDALVREVAHRPETNVLRVGTPDDYAQLILPEIIGTLSRENR 122 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEP 186 + V + ++ M++S ++DL + T S + + L P W A + Sbjct: 123 HVEFHVVSDLSVNLSRMVDSGDLDLALVT-WASGIQGIRLAEEPLAWVAAPHSAAASLDT 181 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +PL L RDM + L++ WR+A+ A+ +R A+ G + P+ + D Sbjct: 182 LPLALFPQGCRVRDMAVEALDRIGRRWRVAFSANQFTPLRTAITHGEAIGVLPLRAVPKD 241 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPEGD 302 L + GLP LP ++ ++++ +Q + +Q P+++ Sbjct: 242 LVQVGPEHGLPELPCAPLIIKIGRAADDSA----HQLAGAIAYAFQPRPLASAATG 293 >UniRef50_A1B0T7 Transcriptional regulator, LysR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B0T7_PARDP Length = 297 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 86/270 (31%), Positives = 133/270 (49%), Gaps = 1/270 (0%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 I NL DLLRTF+ V +L + A AA+ R+Q A+S Q++RLE+LV L + GR L Sbjct: 4 ITNLPTDLLRTFITVVELGGHSRAGAALGRSQPAISLQIRRLEELVRAPLLTQEGRAILP 63 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G LL YAR+++R NDEA S S+ GVL IG + A L L R + + Sbjct: 64 TLAGEALLSYAREMVRINDEAVSYFHRSDKTGVLRIGLPTDYAVAFLQGTLTRYIRGHAE 123 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALN-LRTSPTHWYCAAEYILQKGEP 186 + L+V + + + L S ++D++V + L+ + T W A ++ L P Sbjct: 124 VELEVHCDLSRELHQHLRSDDLDIIVAVMPTARMPYLSRMWTEQPIWAAAEDFQLPAHAP 183 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +PL + +R ++ L+ + WR+ Y + ++ AV+ GL VTA M Sbjct: 184 VPLGAHPEGCDYRARMIQALDAVERRWRIVYTGPGISGLQNAVRNGLCVTALTRATMLSG 243 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSNNEL 276 +R+L+ DG P L L Y + Sbjct: 244 MRMLTEADGFPALEPLRVGLFYKHPRLSAA 273 >UniRef50_Q11NC7 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=Q11NC7_MESSB Length = 303 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 95/293 (32%), Positives = 149/293 (50%), Gaps = 6/293 (2%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + N+ DL+R+FV+ D +F AA V RTQSAVS Q++RLE++VG +LF R + L Sbjct: 10 VPNIPTDLMRSFVSAIDGGSFTRAAEMVGRTQSAVSLQIKRLEEVVGTQLFQRDAHSLQL 69 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G YAR++L NDE + + + G + +GA E ++LP LL R + +P Sbjct: 70 TGQGRTFAQYARRMLALNDEVLALMQSPAVSGRVRLGAPSEYTASMLPHLLGRFAQAHPN 129 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHR-PSAFKALNLRTSPTHWYCAAEYILQKGEP 186 + L+V + + ++ E DL+V H A + T P W+ +A++ P Sbjct: 130 VMLEVTSDLSENLLTRQQNGEFDLVVALHDNQRAGSGKLIHTEPLVWFTSADHFGHMRSP 189 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +PLVL P +R ++L LN+ R++Y++S+ A AAV+AGLGVTA + D Sbjct: 190 LPLVLAPPPCIYRKLMLYQLNREAKLCRISYLSSSYTAAIAAVRAGLGVTAMVQSTLPGD 249 Query: 247 LRVLSGVDGLPPLPDTEYLLCY-----DPSSNNELAQVIYQAMESYHNPWQYS 294 +R+L DGL L E L + + L I + + P + Sbjct: 250 VRLLGSPDGLNSLGHLEVRLHRLLAVESAEAIHCLETYIAEHLSQAERPGDRT 302 >UniRef50_Q7MCP0 Transcriptional regulator n=17 Tax=Vibrionales RepID=Q7MCP0_VIBVY Length = 304 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 73/289 (25%), Positives = 141/289 (48%), Gaps = 3/289 (1%) Query: 2 ISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARH 61 + +N+D++ LR+F+A + +F AA + RTQSA S QM++LE+ +G ELF + Sbjct: 13 LKIRWIRLNMDIEALRSFLAFVETGSFTRAAKQISRTQSAFSAQMRKLEEEIGAELFIKE 72 Query: 62 GRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRV 121 GR +L++ GI+L +AR+++ +D+ S L + L +G ++ + +LP L+ + Sbjct: 73 GRYLVLSDAGIRLTSHARQLVSQHDQTLSELKHFQDKRPLRLGCPEDYNEKVLPSLIALL 132 Query: 122 SSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYIL 181 P ++ V + + + L++ ++D + T P++ + L + W + + + Sbjct: 133 HQAQPTCSIQVFSEPSIELRRKLDAGDLDCAILTRAPNSEEGYWLTSDQGVWIASQTFCV 192 Query: 182 QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVE 241 + +PL L + + L K ++L +T A RA V+ GL + A Sbjct: 193 EAHSALPLALFQADCKYHAAAIDGLTKRGQAFQLLACCNTASAQRALVEQGLAIGAMGKL 252 Query: 242 MMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNP 290 M +R+L PPLP + +L S+ L+Q + +E + Sbjct: 253 SMGDKVRLLKD---FPPLPKVDIVLAVSAKSHPLLSQTWLKQLEQQFSD 298 >UniRef50_Q2SMF3 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SMF3_HAHCH Length = 285 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 85/273 (31%), Positives = 134/273 (49%), Gaps = 2/273 (0%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + ++ +LL+TFV V D A+ + +TQS VS Q+ RLE+ +G LF GR K L Sbjct: 3 LPDISTELLQTFVTVVDSGGVLRASERLFKTQSTVSMQLSRLEERLGVALFKTVGRRKEL 62 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G +L YARKIL +EA ++ +G LTIG S D L L++ + YP Sbjct: 63 TPEGETMLIYARKILDLQNEALKAIQGVQFEGELTIGISRSLVDGDLTNELSKFAMQYPL 122 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + L+VR + ++ E +E D ++ + + L L + W + ++ G P+ Sbjct: 123 IKLNVRSASSMHLHNAFEQEEFDCIIRLTQDPSADELVLSKAKMVWVASDKFQFDPGIPL 182 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 + P FR + L A I W+ AY + L A+ +AV+ L V+AR + P Sbjct: 183 RMANFTTPCQFRSISEKALKAAGIVWQEAYTTNNLNALMSAVRGNLAVSARTQHALQPGT 242 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVI 280 RV+ +GLP LP E + ++ LA+ Sbjct: 243 RVVGPEEGLPELP--EIFVVAQTRGSSRLAEFF 273 >UniRef50_A2SCP1 Transcriptional regulator, LysR family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SCP1_METPP Length = 285 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 81/278 (29%), Positives = 137/278 (49%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 + LD+D LRT VA AD + AA V +T SAVS + +L + + L R GR +LT Sbjct: 1 MLLDIDQLRTLVAFADAGSCKGAAHLVHKTPSAVSVHLAKLAASLERPLLERQGRRLVLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G +L+ YAR++L EA + G L +G D+ ++ LL ++ + P+ Sbjct: 61 HDGTELVRYARRMLALQSEALAHFRAPEFGGTLRVGLPDDYIPVLMAPLLAALARLAPRA 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 ++V+ +A + +L ++DL + + + + LRT W +A++ + + +P Sbjct: 121 HVEVQCAPSAELRPLLADGQLDLAILSAETDTQEGVVLRTERVVWTASAQHDVAHADCLP 180 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L L + FR LA L K R+ + ++ AV+AAV+ G V+ + PD Sbjct: 181 LALFPEGCIFRKWALAQLRKRRREHRIVCTSRSMAAVQAAVRTGFAVSVVAESCVPPDAV 240 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 VL+ G P LP +L P+++ LAQ + + M Sbjct: 241 VLTPQQGFPALPAVTIILAASPATDAALAQRLGEQMRG 278 >UniRef50_B9Z2V3 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z2V3_9NEIS Length = 295 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 92/297 (30%), Positives = 139/297 (46%), Gaps = 11/297 (3%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 ++LD LLR FV+V + AA+ + RTQ AVSQQ+++LEQ +G+ L R R LT Sbjct: 3 MDLDTALLRAFVSVVRSGSINRAASRLQRTQPAVSQQIRKLEQQLGQPLLERSPRGISLT 62 Query: 69 EHGIQLLGYARKILRFNDEACSSL-MFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 G LL YA ++L D+ L IG ++ T LP +L +SV+P Sbjct: 63 GAGESLLPYAERLLMLTDQLLPGLGSLPTSAQHRRIGIMEDFVGTRLPRVLADFASVHPG 122 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTS-----PTHWYCAAEYILQ 182 L L V V + + + E+D+MV++ P L+ P W+ A L Sbjct: 123 LRLSVTVGLKVELFAAMNAGELDVMVSS--PLGDSGPLLKPEAQFLCPLAWFAARGKPLA 180 Query: 183 KGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEM 242 +PLV+ P +R+ LATLN+A PW + + + +LPA++AAV+AGLGV A + Sbjct: 181 T-TSLPLVIFSAPCSWREQTLATLNRAGQPWHIVFESFSLPAIQAAVEAGLGVAAMLADT 239 Query: 243 MSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM-ESYHNPWQYSPMSA 298 P LPPLP + ++ L+ + P +A Sbjct: 240 -PPANSYCINDGSLPPLPGMPVGVYRQSGDSDPLSGQLAALFCRELGEPVALPATTA 295 >UniRef50_Q1QTI0 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=Q1QTI0_CHRSD Length = 315 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 74/268 (27%), Positives = 116/268 (43%), Gaps = 1/268 (0%) Query: 19 FVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQLLGYA 78 FV VAD F AAA + +TQS +S ++ LE +G L R R LT G L YA Sbjct: 40 FVTVADSGGFTAAARYLHKTQSTISLRISTLESRLGTLLIERGSRRLTLTGDGETFLVYA 99 Query: 79 RKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVRVKRNA 138 R++L+ EA ++L S L G ++ ADT LP LL R + +P + + + + + Sbjct: 100 RRLLQLQREAIAALGRSQPV-TLRFGIPEDYADTWLPALLERFGARHPDVHVHIHCRMST 158 Query: 139 YMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLVLLDDPSPF 198 + E LE +D+++ + + T W + L G PIPL L + + Sbjct: 159 ELLEQLEKGSLDIVLAVQHAADSGGRPVATEDVVWAAHRRFALDPGRPIPLALFPEQCIY 218 Query: 199 RDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGVDGLPP 258 R LA L W+L + + +R V G +T + D + L +GLP Sbjct: 219 RRRALAALAGIGRDWQLDSTSQSPSGLRVIVNQGQTLTVTDRRSLPEDWQALGEEEGLPS 278 Query: 259 LPDTEYLLCYDPSSNNELAQVIYQAMES 286 LP + PS + ++ Sbjct: 279 LPPAVIEVHRSPSLTHPAFDDFVALIDE 306 >UniRef50_A1S908 Putative LysR-family transcriptional regulator n=1 Tax=Shewanella amazonensis SB2B RepID=A1S908_SHEAM Length = 307 Score = 243 bits (620), Expect = 8e-63, Method: Composition-based stats. Identities = 92/267 (34%), Positives = 135/267 (50%), Gaps = 6/267 (2%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD LLR FVAVAD +F AAAA TQS VSQQ++RLEQ +G EL +R GR + T Sbjct: 18 LDPVLLRAFVAVADSGSFTRAAAATHLTQSTVSQQLKRLEQQLGCELLSRKGRYAMPTAD 77 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LLGYAR+IL EA + L L + +++ A T L +L ++ + +P + L Sbjct: 78 GERLLGYARQILALMAEAGMTPAQPPL---LRLAVAEDFAGTALMPILKKLITRFPSVKL 134 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQ-KGEPIPL 189 +V+ + + + + V+L + R A W AA++ GEP+PL Sbjct: 135 EVQSGLSKPLYQAFQEGVVELALIKQRQGEHPAKACWPEALSWLAAADWQAVKAGEPVPL 194 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 + +R+ + L++A IPWRL Y +++L V AV AG+GV+ P + R Sbjct: 195 IAFPAGGLYRNEMAQLLDEAGIPWRLVYSSNSLEGVLCAVAAGMGVSLLPSRFIRA--RE 252 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNEL 276 + LP E L S EL Sbjct: 253 HREITALPRATAMELALHLASSPGAEL 279 >UniRef50_B4E8W5 LysR family regulatory protein n=25 Tax=Burkholderia RepID=B4E8W5_BURCJ Length = 310 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 83/276 (30%), Positives = 124/276 (44%), Gaps = 3/276 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD+ LLRTF+ V D FA AA + T SAVS ++RLEQ G L AR R LT Sbjct: 24 LDIALLRTFLEVVDRRGFAPAAERLALTPSAVSGHIKRLEQAAGTVLLARTTRRIALTPA 83 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L YAR I+ E + L + G L +GAS++ A LP +L +P ++ Sbjct: 84 GDTLYAYARNIVDMEREVRARLRGAPAHGPLRVGASEDFAGAWLPHVLRTFRDRHPHTSI 143 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTH-RPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 +++V A + +D++ R L P W AA+ L G +PL Sbjct: 144 ELKVGITASLLREQMLGRLDVVFGKQCRQVDAPGELLWEEPLVWAFAADRPLDAGGEVPL 203 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 L P +R+ +A L A P+R+ + + ++ +A AG VTA + LR Sbjct: 204 ALFPQPCVYREAAVAALAAALRPFRVLFESGSMAGCVSAALAGFAVTALARSQLRDGLRE 263 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 DGLP LP + + + + +A+ Sbjct: 264 CGPQDGLPALPAARFHAF--AAKPDGPGAALIEAVR 297 >UniRef50_UPI0001B5968A HTH-type transcriptional regulator pecT n=1 Tax=Brucella neotomae 5K33 RepID=UPI0001B5968A Length = 317 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 128/227 (56%), Gaps = 3/227 (1%) Query: 3 SANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHG 62 P+ LD+D+LRTFVA+AD +F++AA AV RT SAVS Q+++LE+ +G +F R Sbjct: 14 PVQHPLPMLDIDVLRTFVAIADTGSFSSAANAVFRTPSAVSMQIKKLEEQLGVAVFDRDA 73 Query: 63 RNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVS 122 R+ LT G LLGYAR++L N EA S + + G++ +G+ D+ + +LP +L R + Sbjct: 74 RSVTLTGDGEILLGYARRLLALNREAVSKFVAPTVTGIVRLGSPDDIGECVLPLVLKRFA 133 Query: 123 SVYPKLALDVRVKRNAYMAEMLESQEVDLM---VTTHRPSAFKALNLRTSPTHWYCAAEY 179 +P + +DV + +++ + + L+ + +D+ ++ P+ + W A Sbjct: 134 ETHPGVTVDVVIDQSSNLRKRLDERRLDVTLVNISQAVPTRDDVEIMLDEELVWARAKCG 193 Query: 180 ILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVR 226 + +P+PL + ++ +R L L K+ P+R+AY++S R Sbjct: 194 TAYRRDPLPLSIWEEGCAWRANALQALEKSGRPYRVAYMSSHSTGQR 240 >UniRef50_Q3IFV7 Putative bacterial regulatory protein LysR Family n=3 Tax=Alteromonadales RepID=Q3IFV7_PSEHT Length = 281 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 68/279 (24%), Positives = 133/279 (47%), Gaps = 3/279 (1%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + N+ D LRTFV V + + FA A + +Q AVS Q++RLE L+G +LF + G+ ++L Sbjct: 1 MKNISTDSLRTFVMVVEASGFAKAGDLLGLSQPAVSLQIKRLEDLLGYKLFKKQGQRQVL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 ++G LL A+++++ ND ++ G + +G E A ILP ++ ++YP+ Sbjct: 61 NQYGELLLPMAKQMMQHNDAILQLFTSESITGRVRLGIPSEFAARILPSIIGDFVALYPE 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLR-TSPTHWYCAAEYILQKGEP 186 ++L+V+ + + ++ + DL++ + + + W + L + + Sbjct: 121 VSLEVKSRLSKHLLSQERQDQFDLVLALNEQLDSEQFPIFKQDQLVWVG--DLSLAQNDT 178 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 + LV + +R + L ++ I +R+ Y + L + AA+K GLG+T + + Sbjct: 179 VTLVTAPEGCIYRRRAIEALERSGIKYRIVYSNADLTGLIAALKEGLGITVLAKSTVPNE 238 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 L LP L D L S + + ++ Sbjct: 239 LNYQLKTKFLPSLGDIGISLVKTASEPENAVFKLAEFIK 277 >UniRef50_B7KZZ4 Transcriptional regulator, LysR family n=11 Tax=Bacteria RepID=B7KZZ4_METC4 Length = 289 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 78/288 (27%), Positives = 137/288 (47%), Gaps = 1/288 (0%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + NL++D +R+F+AV + +F AAA + QS VS + RLEQ +G+ L R L Sbjct: 1 MSNLNVDQIRSFLAVLESGSFTAAAQTLGLQQSTVSGHIARLEQALGRSLLMRDTHRVAL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G ++G+AR +L +D + L+G + +G S++ + L +L R + +P Sbjct: 61 TPDGQAMIGFARDVLEAHDRLRAFFSPGGLRGRIRLGVSEDYTLSALAQVLARFADGHPS 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + L + V + + + ++ E+D++ R + W + P+ Sbjct: 121 VDLQLTVGLSRALYQGYDAGELDVIFCKRRRGDPRGELAWAEELIWVGRPGFAPDPALPL 180 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PLVL PS R + L L A WR+A + +L +RAAV+AGLG+ ++ P L Sbjct: 181 PLVLYPPPSITRTLALDALEAAGRSWRIACTSGSLMGLRAAVEAGLGIAPHSAQVTPPGL 240 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSP 295 + GLPP+ + E+++ + A + A+ + Q P Sbjct: 241 APIPETAGLPPIGEVEFVVLGS-GRQHPAATALQDAILASTAELQAVP 287 >UniRef50_Q48I21 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=Q48I21_PSE14 Length = 297 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 81/282 (28%), Positives = 134/282 (47%), Gaps = 4/282 (1%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + +LD D L FVAV D F A + +TQ+AVS + RLE VG++L R R L Sbjct: 1 MRHLDTDCLAAFVAVIDCGGFTTAGERIGKTQAAVSLMLGRLESRVGRKLLERSRRGVTL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 TEHG +L+GYAR+I DEA ++L + IG D+ +++ L+ + +P Sbjct: 61 TEHGERLIGYARRIQMLEDEALAALDCGQEATRVRIGMPDDYLESLGCELMQAFTLRHPH 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 L +++ ++ + M+ +DL + T + + LR P W A + ++ + + Sbjct: 121 LQVEIICDFSSRLESMITEGSIDLAIITRSGTKVQGELLRCEPMLWCAAPGHFPEQQKVL 180 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL L + R ++ L+ PWR+ +S LP V +V+ G VT P ++ Sbjct: 181 PLSLFTESCRARPQIIEALDMLGTPWRVVSSSSHLPGVMHSVRLGTSVTVLPASVVPSGW 240 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSS---NNELAQVIYQAMES 286 R+L + LP LP E L + LA + ++ Sbjct: 241 RILKS-EQLPRLPSIELELLVPEHALLNTRRLAHFVRDCFQA 281 >UniRef50_D0RZH8 Transcriptional regulator n=1 Tax=Acinetobacter calcoaceticus RUH2202 RepID=D0RZH8_ACICA Length = 294 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 85/287 (29%), Positives = 149/287 (51%), Gaps = 7/287 (2%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 NLDLD LR FV +L +F AA +CR+ +A+S Q+++LEQ G +L ++GR LT Sbjct: 9 TNLDLDALRAFVKGIELGSFYLAAQNLCRSPAAISAQLKKLEQQTGCQLLRKNGRLLELT 68 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L +A+ +L ND+ L + GV+ G ++ A+ L L+ + YPK+ Sbjct: 69 PSGELLFSHAKSVLAMNDKVLLQLHQTQATGVIRFGLQEDFAEGTLQQLIAQFMLQYPKV 128 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKAL-NLRTSPTHW-YCAAEY---ILQK 183 ++V RN + E ++ QE+DL + + A + L+ T W +C+ + I++ Sbjct: 129 QFQIQVDRNLNLLEKVQKQELDLALIWQQDEARENFYELQNVETEWLFCSHPHIQQIIET 188 Query: 184 GEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMM 243 G IPLV+L P R M + L + + W +AY +++ A+ AV+AG+G++ R + + Sbjct: 189 GTSIPLVVLQQPCILRQMAIQALEEKGLEWHIAYECNSVQALWPAVRAGIGISLRSLFQI 248 Query: 244 SPDLRVLSGVDGLPPLPDTEYLLCYDPSSNN-ELAQVIYQAMESYHN 289 D+++L + LP L + L + + Q + +E + Sbjct: 249 PSDIKILKSAE-LPQLRSLSFGLYSSSKLESGHIVQQFQKYIEQHLQ 294 >UniRef50_A3XB80 Transcriptional regulatory protein, LysR family protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XB80_9RHOB Length = 305 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 89/282 (31%), Positives = 142/282 (50%), Gaps = 4/282 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 L+LD LR+FVA+ + +F AAA V ++ SAVS Q+ +LE+L+G L R R+ LT+ Sbjct: 20 TLNLDALRSFVAICETGSFRRAAARVHKSPSAVSLQIGKLEELLGVRLLDRDARHVALTD 79 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LLG AR+IL NDE + S L G L + A + +++P LL R++ V+P + Sbjct: 80 QGGTLLGQARRILGMNDETLALFRRSALVGRLCLSAPHDLGVSLVPGLLRRLAEVHPGVH 139 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHR-PSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 +DVR+ + + + + +L + SA +A +L + P W + +P+P Sbjct: 140 VDVRLGTSDAVQKGITDGSANLALFNDVGASAIQAHDLFSEPLKWLVLDGGQAVQQDPLP 199 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L + D +RD L L +R+AY + T AA++A L V A P+ + DL Sbjct: 200 LAVADVGCAWRDAALNALQTVGRAYRIAYSSDTSMGQVAALRADLAVAALPLSLADRDLI 259 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNP 290 LP LP T + +ELA+ + + + P Sbjct: 260 EAPSHYDLPQLPLTHIRVA---DDGSELARAFVELVAADMRP 298 >UniRef50_D0IY48 Transcriptional regulator, LysR family n=22 Tax=Proteobacteria RepID=D0IY48_COMTE Length = 333 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 91/298 (30%), Positives = 155/298 (52%), Gaps = 20/298 (6%) Query: 12 DLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHG 71 DLD+LR+F L +FA AA + R+ SA+S Q+++LE G L + GR LTE G Sbjct: 7 DLDVLRSFSTGVALGSFARAADKLGRSTSAISAQLKKLEAQCGTPLLRKAGRGLELTEAG 66 Query: 72 IQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALD 131 LL YA ++L NDEA +++ S L+G++ +G ++ + +LP +L R + +P++ ++ Sbjct: 67 ETLLAYAHRLLELNDEAVAAVSGSQLRGLVRLGLQEDLGEALLPAVLGRFARAHPQVRIE 126 Query: 132 VRVKRNAYMAEMLESQEVDLMVTTHRP---SAFKALNLRTSPTHWYCAAEYILQK----- 183 V R+ + E ++DL + S A + P HW A + Sbjct: 127 ACVGRSDELRERFAQGQLDLAMLWDVGADLSGIHAETVMRLPLHWIGPAAPEVLDSLGCL 186 Query: 184 -------GEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 + + LV+L++P P R++V A L +A I WR A+ +++L + AA AGLG++ Sbjct: 187 QPDQEGKLKTLALVMLEEPCPLRELVTAVLERAGIAWRHAFSSASLGPIWAATSAGLGLS 246 Query: 237 ARPVEMMSPDLRVLSGVD-GLPPLPDTEYLLCYDPS----SNNELAQVIYQAMESYHN 289 R + P +R + + GLP LP + +L S S LA ++ +A+ ++ N Sbjct: 247 VRTPFGLPPHVRSYAPEEIGLPHLPTMDLVLGRSHSLLEPSAERLATLLVEAVRAHTN 304 >UniRef50_B9YZG6 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YZG6_9NEIS Length = 290 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 83/292 (28%), Positives = 134/292 (45%), Gaps = 7/292 (2%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + ++ + L+RTFV VAD AA+ + R S +S Q+ RLE LV L R L Sbjct: 1 MADIPIPLMRTFVVVADTLNLTTAASRLHRAPSTISMQLNRLEALVTAPLLERGQYGVRL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G QL +A ++L +D S +N+ G + +G D A L LL YP+ Sbjct: 61 TAAGEQLRTHAHQLLSLHDRILGSFQNANITGKVRLGTHDLYATRALTPLLEAYMLSYPE 120 Query: 128 LALDVRVKRN-AYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEP 186 L+V Y+A ++ ++DL + + L L W A + + + P Sbjct: 121 AWLEVTCDHRPHYLASLVNEGQLDLALVEMPALSDGGLRLCRDQLIWVRAETHPVHQRTP 180 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +PLVL + +R+ L +D P+R+A+ + + V AAVKAG+GV P + Sbjct: 181 LPLVLFPEGCYYRETATRALQLSDRPYRVAFTSHSRGGVLAAVKAGIGVGITPRTTVEEG 240 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES---YHNPWQYSP 295 L ++ G LP LP T+ L + NE ++ Q ++ + + P Sbjct: 241 LVIIEGE--LPSLPQTDTTLFIADN-VNEATTLLAQTIKRSPLFQRDSRNGP 289 >UniRef50_A4SIM7 Transcriptional regulator, LysR family n=3 Tax=Gammaproteobacteria RepID=A4SIM7_AERS4 Length = 297 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 96/290 (33%), Positives = 154/290 (53%), Gaps = 11/290 (3%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +NLDLD LR++V D +FA AA +CR+ SAVS Q+++LEQ G EL + GR+ + T Sbjct: 6 LNLDLDALRSYVLGLDCGSFALAAQRLCRSTSAVSAQLKKLEQQCGTELVMKRGRHLVPT 65 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G +LLGYA+++L NDEA +L LQG + +G ++ +++LP +L + +P L Sbjct: 66 ASGERLLGYAKRLLELNDEAVLALKGELLQGEIRLGVQEDFGESLLPAVLGPLCRQHPTL 125 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSA-FKALNLRTSPTHWYCAAEY----ILQK 183 + R+ RNA + + + +D+ + P A + W + + +L + Sbjct: 126 RMTTRIDRNAQLMKGIREGTLDMALAWQHPEERIDAHLIDLVSLQWIAHSNWDPAPLLAR 185 Query: 184 GEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMM 243 GEP+PLVL D P R L L+ A IPWR+A+ + +L + AA++AGLG+T R M Sbjct: 186 GEPLPLVLFDAPCLMRSRALKALDDAGIPWRIAFTSQSLGGIWAALQAGLGITVRSAIDM 245 Query: 244 SPDLRVLSGVDGLPPLPDTEYLLC----YDPSSNNELAQVIYQAMESYHN 289 L L+ LP +L + +L ++ QA++ H Sbjct: 246 PTSLSPLA--YVLPSPGTLGVVLLGAGNGSGEAERQLQSLLTQAVQRAHA 293 >UniRef50_A3JDH1 Probable transcriptional regulator n=1 Tax=Marinobacter sp. ELB17 RepID=A3JDH1_9ALTE Length = 287 Score = 240 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 88/278 (31%), Positives = 139/278 (50%), Gaps = 2/278 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDL++LRT VA+AD + AAA + TQSAVS Q++RLE + L GR LT Sbjct: 6 LDLNMLRTLVAIADAGSVTAAAERLAYTQSAVSMQLRRLEASLDVALHEPEGRKIRLTAE 65 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +L+GYARK+L N EA + + G L++G ++ A +L +L+ S YP + L Sbjct: 66 GQKLVGYARKMLALNSEAVDDVQRRQVSGELSLGIPEDYA-FLLTSVLSHFSQRYPAIQL 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 V + + + + ++ +D+ V T + + +R P W A +PIPL Sbjct: 125 QVICRSSVDLVKQVQDGGLDMAVVTRQVRSPGGEVIRREPLVWAVGATAQPSLADPIPLA 184 Query: 191 LLDDPS-PFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 L + FRD+ A+L A WR+AY + ++ + V AGL V M++ LRV Sbjct: 185 LYSPGADVFRDVAEASLAAAGRSWRMAYSSQSMTGLLPVVVAGLAVVVVTRNMLTDQLRV 244 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 + G+P L E L +E A+ + + ++ Sbjct: 245 IDERSGMPALQSVEIALHRSIGRPSEPARQLADLIRTH 282 >UniRef50_Q3J596 Transcriptional regulator, LysR family n=37 Tax=Rhodobacterales RepID=Q3J596_RHOS4 Length = 322 Score = 239 bits (612), Expect = 6e-62, Method: Composition-based stats. Identities = 79/282 (28%), Positives = 124/282 (43%), Gaps = 2/282 (0%) Query: 4 ANRPII-NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHG 62 +R + NLDL LR+FVAVAD AA + TQSAVS Q++RLE+ + L R Sbjct: 8 RSRDMPRNLDLTALRSFVAVADAGGVTRAAGFLNLTQSAVSMQIKRLEETLDLALLDRSA 67 Query: 63 RNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVS 122 R LT G QLLGYAR +L NDE L + +G + +G + +P +L R S Sbjct: 68 RRVALTAAGEQLLGYARWMLALNDEVFGRLTHDDFEGEVVLGVPHDIVYPAIPQVLQRFS 127 Query: 123 SVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQ 182 + +P++ + + + E D+++TT L P W A Sbjct: 128 AEFPRMRVTLLSSYTRKLKSQFARGECDVIMTTEDTVEPGGETLVELPLVWVGAPGGQAW 187 Query: 183 KGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEM 242 K P+ L + FR V + L+ A IPW +A + + + A+V A L V Sbjct: 188 KQRPLRLA-FEPNCIFRMGVQSALDAAGIPWTMAVESDSSRTIEASVSADLAVHVSLAGA 246 Query: 243 MSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 + + LP L ++ L ++ + + + + Sbjct: 247 EPRYMERIPHGGTLPDLETSKVNLYVADPVHSPAVEGMAELI 288 >UniRef50_C6AY75 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=C6AY75_RHILS Length = 285 Score = 239 bits (612), Expect = 8e-62, Method: Composition-based stats. Identities = 82/280 (29%), Positives = 149/280 (53%), Gaps = 1/280 (0%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 +++LD LLR F+ VA++ T AA + RTQ+AVS Q+++LE+LVG LF+R + L Sbjct: 1 MLDLDSYLLRAFLTVAEIGTVNGAAVKLNRTQAAVSMQIRKLEELVGVTLFSRSSKGLEL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T HG +L YAR+++ +DE L ++ + +G ++ A L +L+ + PK Sbjct: 61 TSHGQIMLAYAREMVALSDEVGKRLTGKMIEDRIRLGVVEDFAAGHLIDILSAFRAQNPK 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + +D+ V+ N +A + E +++DL+V + K + T W ++++ +P+ Sbjct: 121 VEIDIIVEPNRRLASLFEDRKLDLVVCDITCLSRKPTLIWTEYLMWTVRSDFVADTEKPL 180 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 P+++ ++ P+ +A L++ +I W+ A VASTL A+ AV+ G+G+ + Sbjct: 181 PIIMFEEECPWTLPTIAALSQRNIKWKTACVASTLVAMATAVRVGIGIAPMMLTTKPEGC 240 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 R L LP E L Y S + E A+ + + + Sbjct: 241 RTLDRSADLPGPVRIEIGL-YAQSESAEGARYLVDFISRH 279 >UniRef50_A6UJN8 Transcriptional regulator, LysR family n=5 Tax=Alphaproteobacteria RepID=A6UJN8_SINMW Length = 285 Score = 239 bits (612), Expect = 8e-62, Method: Composition-based stats. Identities = 82/278 (29%), Positives = 132/278 (47%), Gaps = 4/278 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDL LL TFV A + +A A V RTQSAV+ QMQRLE+++G L R G LT Sbjct: 5 LDLRLLITFVHAAHSGSLSATAVQVGRTQSAVTMQMQRLEEMLGHSLLHRSGSGVRLTGS 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G + L YA +IL+ +DEA S+ L G + G+ ++ + P LL S YP + + Sbjct: 65 GERFLVYAERILKMHDEAVSAFSDKGLHGSMVFGSPEDYLISFFPMLLRSFGSKYPDVEI 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCA-AEYILQK-GEPIP 188 V + +L+S++VDL + + +RT P W + L G+ +P Sbjct: 125 KVVSAPTVELRTLLQSRKVDLALVSTPNLNDVENIVRTEPLVWVGSKPTLELHDFGDAVP 184 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L L + L + A + +++AY +++L + ++GL ++ E + PDL Sbjct: 185 LALPASNAMDHRAALQAMGGAGLRYKIAYASNSLAGLIGLARSGLAISVMTQEAVPPDLH 244 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 VL+ LP LP ++ + + + S Sbjct: 245 VLNAP--LPQLPHLGIMIACADADQSPAVAAFADHIRS 280 >UniRef50_D1RXQ6 Transcriptional regulatory protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RXQ6_SEROD Length = 330 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 92/277 (33%), Positives = 140/277 (50%), Gaps = 3/277 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + LL +FVAV D +F AA V +QS VSQQ++RLE+++GK LF R LLTE Sbjct: 53 FNPQLLLSFVAVCDSGSFTRAADRVFLSQSTVSQQVRRLEEMLGKPLFERSSHQVLLTEE 112 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G++LL YAR+I+ N+EA +L GVL +G ++ A LL S +P L L Sbjct: 113 GVKLLSYARRIIALNEEAHDALTGIWRDGVLRLGMPEDFAAPT-TELLAEFSRAHPHLRL 171 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 DV +A + +E+DL++ R + R P W + + + P+PL Sbjct: 172 DVASGLSADLHSAYAREELDLILVKQR-RSQPPRAARPEPLLWLDSLAFPAIEQSPVPLA 230 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 + +R+ + L+ WR+ Y +++L A+ AA AGLGVT P P RVL Sbjct: 231 VFPLNGLYREELCQALDNLGKRWRIGYSSASLAALTAASAAGLGVTLLPAGCRLPSHRVL 290 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 +GLPP+ E L Y S+ + + + ++ Sbjct: 291 GIAEGLPPVGSFELALYYRDSA-PAATPALAERLRAF 326 >UniRef50_C5CN69 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CN69_VARPS Length = 300 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 85/285 (29%), Positives = 130/285 (45%), Gaps = 3/285 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD LR FV+VAD + AA A+ TQSAVS Q++RLE+ +G +F R R+ LT Sbjct: 2 LDSQQLRAFVSVADHGSVTRAADAMHLTQSAVSAQIRRLEEQLGCRVFDRTTRSLQLTAQ 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQ-GVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LL YAR IL+ +A S L L +G S+ L L P + Sbjct: 62 GSVLLSYARSILKLQQQAVSRLAAPRHAPATLRLGCSEGFPSEWLFGALAGFRERRPDVH 121 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 +++ + +A+ + +DLMV T + L P W +A+ +L P+PL Sbjct: 122 VEISCGISTMLAKQVRQHSLDLMVGTVCDAGSDTETLWMEPLVWAFSAKALLDPEAPVPL 181 Query: 190 VLLDDPSPFRDMVLATLNKADIP-WRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L +P PFR+ LA+L W++ A + A+ AA AGL +T M LR Sbjct: 182 AFLSEPCPFREAALASLAGHGTTHWQIVLTAQSSGALVAAAAAGLAITVLTPSGMPSGLR 241 Query: 249 VLSGVDGLPPLPDTEYLL-CYDPSSNNELAQVIYQAMESYHNPWQ 292 + LP LP +++ + + +E + + W+ Sbjct: 242 SIPPGSFLPVLPAARFVIQHWKSGTPSEALSALADDVREACFRWR 286 >UniRef50_D2C3C2 Transcriptional regulator, LysR family n=1 Tax=Dickeya dadantii Ech586 RepID=D2C3C2_DICD5 Length = 283 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 66/281 (23%), Positives = 130/281 (46%), Gaps = 7/281 (2%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +L++ LRTF+ V + AA +CR+QSA+S +++LE ++ LF+R + LT Sbjct: 5 DLEIQWLRTFLTVVKKGSMTVAAEQLCRSQSAISMHIRKLEDVLAVRLFSRDSKKLSLTT 64 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL YA K+L + + S++ S L G ++ G D+ A L +L S YP + Sbjct: 65 AGYELLSYAEKLLLLHSQTKSAIRRSELCGKVSFGIPDDYASAYLSEILTFFSQHYPAVE 124 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 L++ + ++ + +++ +D+ + T R + L P W P+P+ Sbjct: 125 LNLLCEPSSLLLPKIDAGTLDVAIIT-RDVPDRGHFLSHEPLVWVGYFPEDAIDDAPLPV 183 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 + + S R ++++L + R+ Y + + A K+GL + + +++ Sbjct: 184 AMYEFGSEARKKIISSLEQVTQGCRIMYNSPYIAGQIAVAKSGLALAILTQCSVPEGMKI 243 Query: 250 LSGVDGLPPLPDTEYLL-----CYDPSSNNELAQVIYQAME 285 ++ + LP LP + + C D + L V+ Sbjct: 244 INS-EKLPKLPVLDVAIVKGHHCLDDHPASRLTDVVIDMFR 283 >UniRef50_A6LQS5 Transcriptional regulator, LysR family n=5 Tax=Clostridium RepID=A6LQS5_CLOB8 Length = 324 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 127/294 (43%), Gaps = 15/294 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D L F+ ++ L +F AA + QS+++ Q++ LE +G +LF R G+N LT Sbjct: 27 MDFKQLNAFLTISKLQSFTKAADNLGYAQSSITTQIKLLESELGVKLFERIGKNITLTHE 86 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNL-QGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL YA++IL+ + ++++ +++ G LTIGA++ LP +L +YP++ Sbjct: 87 GKKLLPYAKQILKLSSAVKNAVLNTDVPSGTLTIGAAESLCVLRLPEILKEYKKLYPEVD 146 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTH---RPSAFKALNLRTSPTHWYCAAEYIL----- 181 + ++ A L +D+ + + F + P + L Sbjct: 147 ISLKFGNCAEFKYFLNDNIIDVAFSLGVKINSAEFISEIEIPEPMLLLAYPGHPLINKKE 206 Query: 182 ---QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + E PL+L + +R + LN +I +A ++ A++ +GLG+T Sbjct: 207 VFPKDIESEPLILTEMGCSYRATLENILNSCNIKPNVAIETGSVQAIKQFTMSGLGITLL 266 Query: 239 PVEMMSPDL---RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 P + ++ +++ P +L + + + S+ Sbjct: 267 PKVAVDDEINSGKLVPLNWKGPDFGIISQVLYHKNKWISPALKEFLNLSRSFME 320 >UniRef50_A5N491 Transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N491_CLOK5 Length = 301 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 71/300 (23%), Positives = 133/300 (44%), Gaps = 28/300 (9%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D+ L+TF+ VA L F A + +QS+VS ++ LE+ +G +LF R GR L E+ Sbjct: 1 MDIKQLQTFITVAKLLNFREAGEELNYSQSSVSDHIRSLEKELGTKLFERLGRKVFLNEN 60 Query: 71 GIQLLGYARKILRFNDEACSSL-MFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +L+ A KI++ E + G+L IGA++ + LP +L +YP + Sbjct: 61 GKKLISLAEKIIQDEKEIQGLFNKNEKISGLLRIGAAETLSVFWLPPILKEYRIIYPDVK 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFK---ALNLRTSPTHWYCAAEYIL----- 181 + +R+ +ML +D+ + H S + +N+ T + A ++ L Sbjct: 121 VTLRMDDCVEFPKMLSHNMIDVAFSLHDQSQHEYISQINILKDSTVFVAAPDHPLVNLNR 180 Query: 182 ---QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + E +L + +R + L + I S+L A++ VK GLG++ Sbjct: 181 IKIHELENQSFILPEAECCYRVELEELLKENGIKIDTIMELSSLEAIKQCVKIGLGISLL 240 Query: 239 PVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSA 298 P + ++ G + + + + +C A++IY + W P++A Sbjct: 241 PKIAVQREIN--KGELAILTIENCDISIC---------AKMIY-----HKQKWISPPLNA 284 >UniRef50_A8G7X5 Transcriptional regulator, LysR family n=1 Tax=Serratia proteamaculans 568 RepID=A8G7X5_SERP5 Length = 284 Score = 236 bits (603), Expect = 7e-61, Method: Composition-based stats. Identities = 93/277 (33%), Positives = 142/277 (51%), Gaps = 3/277 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + LL +FVAV D N+F AA V +QS VSQQ++RLE+++GK LF R LLTE Sbjct: 7 FNPQLLLSFVAVCDSNSFTRAAERVFLSQSTVSQQVRRLEEMLGKPLFERSSHQVLLTEE 66 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G++LL YAR+I+ N+EA +L GVL +G ++ A LL S +P L L Sbjct: 67 GVKLLSYARRIIALNEEAHDALTGIWRDGVLRLGMPEDFAAPT-TELLAEFSRAHPHLRL 125 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 DV +A + +E+DL++ R + R P W + + + P+PL Sbjct: 126 DVTSGLSADLHSAYAREELDLILVKQR-RSQPPRAARPEPLLWLDSLAFPAIEQSPVPLA 184 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 + +RD + L+ WR+ Y +++L A+ AA AGLGVT P P RVL Sbjct: 185 VFPLNGLYRDDLCQALDNLGKRWRIGYSSASLAALTAASAAGLGVTLLPAGCRLPSHRVL 244 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 +GLPP+ + E L Y + + + ++++ Sbjct: 245 GSAEGLPPIDNIELALYYRDGA-PAATPALAERLKAF 280 >UniRef50_A0NS29 Transcriptional regulator, LysR family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NS29_9RHOB Length = 278 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 73/280 (26%), Positives = 127/280 (45%), Gaps = 3/280 (1%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + +LD+DLLR FV V++ +F A +QSAVS ++++LE +G L +R R+ L Sbjct: 1 MTDLDMDLLRAFVRVSETGSFTRAGQMTGASQSAVSVKIKKLEDRLGNTLLSRSPRSVRL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G + L AR ++ +D + + ++Q L G SD +A LP ++ +S P+ Sbjct: 61 TSFGARFLNDARSLIDLHDSVTARISGPSVQKRLRCGISDHAAGGNLPAIIAALSKALPE 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 L V V + + ++ ++ W + E+ + G + Sbjct: 121 HRLHVAVGYSDTLYTDFKAGLFSAVMVRSEDVEGTGRVAFEENLVWTASREFAWKAGAAL 180 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PLV L + R + TL A I + A+ + + A++AAV AGLG+ + Sbjct: 181 PLVALSETCALRRLAEGTLKDAGISYEDAFTGTGVGAIQAAVSAGLGIACLDRRNIPAGC 240 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 R + + LP LP T+ L +++A I A + Sbjct: 241 REVGDLFQLPVLPKTKMTLFCRE---DDIASAILGAFRDH 277 >UniRef50_A5VE27 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VE27_SPHWW Length = 288 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 84/276 (30%), Positives = 137/276 (49%), Gaps = 1/276 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD L++F AVA F A A++ QS VS+ +++LE G LF R + LT Sbjct: 2 LDPSWLKSFAAVARTLNFTLAGASLNLRQSTVSEHVRKLEAAAGTRLFVRDTHSVRLTVD 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LG+AR IL ND A ++L+G + +G +++ LP LL + ++ +P +AL Sbjct: 62 GEAMLGFARSILEANDRALRHFARTDLRGSVRLGVTEDVVLAGLPELLRQFTAEHPHVAL 121 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 ++ V + + E LE +DL R S + + P W A ++IL P+PL+ Sbjct: 122 ELVVGLSEDVREKLELGMLDLAFIKRRASDKQGERVWREPLVWIAAPDFILDAKAPVPLI 181 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 +L P+ R L L W + + T + AAV AGLGV ++ P L + Sbjct: 182 VLAPPAITRTAALTALETIGGHWHIVCTSGTQSGIHAAVAAGLGVAPHARSLVPPGLDEV 241 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 S + LPPL D E+++ + A+ + +A++ Sbjct: 242 SSPE-LPPLGDVEFVVLAGRQGHRGPARALAEAIKK 276 >UniRef50_B8CHE2 Regulatory protein, LysR:LysR, substrate-binding n=11 Tax=Shewanella RepID=B8CHE2_SHEPW Length = 299 Score = 233 bits (596), Expect = 6e-60, Method: Composition-based stats. Identities = 69/279 (24%), Positives = 128/279 (45%), Gaps = 3/279 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 L ++LL +F+AV + + AA +CRTQS +S Q+++LE+ VG+ L R + LTE Sbjct: 2 LKIELLESFIAVVECGNLSKAADKLCRTQSTISLQIKKLEESVGQPLLLRDNKGVSLTES 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LL YA K+++ + +A L + V+ +G + L L + + L Sbjct: 62 GKTLLNYAYKMMQLSSQALDELKECQNREVIRLGVPTDYITRYLGSCLLEFIREFTCIEL 121 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHR--PSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 + + + + L + E D++V TH P+A L HW A K E +P Sbjct: 122 VIDTDVSGNLYKRLHNGEFDVIVATHWQAPAAGHGELLFERRFHWVAAKGGTAHKRETVP 181 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 + L + P R V A + P + + A+ AV+ + ++ ++ +++ Sbjct: 182 VALYPENCPIRAQVFANHQISMRPMSVLLSTPSPAAMCLAVENDIVISPIAEFRINDNMQ 241 Query: 249 VLSGVDG-LPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 +L V+ +PPLP L +P + + + +++ Sbjct: 242 ILDPVEHNIPPLPVFNESLYLNPETQTDATYQLIDLIKA 280 >UniRef50_Q4KF30 Transcriptional regulator, LysR family n=5 Tax=Proteobacteria RepID=Q4KF30_PSEF5 Length = 286 Score = 233 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 93/277 (33%), Positives = 136/277 (49%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 D LLRTFVAV D F+ AA + TQSAVS ++RLEQ VGK L R R++ LT Sbjct: 2 FDALLLRTFVAVVDEQGFSRAALKLHLTQSAVSGHLRRLEQQVGKPLLQRTTRSQQLTAD 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +L+ YAR IL N +A + L G + +G S++ AD L L + YP + L Sbjct: 62 GERLMAYARAILALNRDAWTELTRVPFHGRVGVGLSEDFADPRLLRALQDFAGRYPGIRL 121 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 DV+V + ++L + L+V + +A L + P W + +P+PL Sbjct: 122 DVQVGIPGTLLDLLAQGNLQLVVGSLCETAEPGRLLWSEPLVWAGLVQPAGLLPDPLPLA 181 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 L +P P+R L L +A I R + S+ A+RAAV +G + + L L Sbjct: 182 LFPEPCPYRAAALGRLAQAGIAQRTVMLCSSNWALRAAVLSGFAIAPMAASQLGAGLCTL 241 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 GLPPLPD +Y L P ++ + + + Y Sbjct: 242 GEEYGLPPLPDAQYRLFTAPEADQTVLAALSEVFVEY 278 >UniRef50_A1WVW1 Transcriptional regulator, LysR family n=11 Tax=Proteobacteria RepID=A1WVW1_HALHL Length = 318 Score = 233 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 84/317 (26%), Positives = 134/317 (42%), Gaps = 23/317 (7%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +N+ L L+ F +VA +F AA + TQ AVS Q+++LEQ VG LF + G+ LT Sbjct: 1 MNITLRQLQVFESVARHLSFTRAAEELYLTQPAVSMQIKQLEQQVGLPLFEQIGKRIYLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSL--MFSNLQGVLTIGASDESADTILPFLLNRVSSVYP 126 E G ++ YA++I E L + G L + + A+ LL + P Sbjct: 61 EAGEEVRRYAQRISAELRELADGLEALRGLNSGRLRLTVAST-ANYFATDLLAAFTRRQP 119 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFK--ALNLRTSPTHWYCAAEYILQKG 184 + + V + ++ E+DL V P A +P A ++ L G Sbjct: 120 GVTFQLEVTNREGVIRRIQDNEMDLAVMGRPPEGLDVAAEAFMPNPLVIIAAPDHPLADG 179 Query: 185 EPIPL--------VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 PIPL VL + S R+ V L + + R S+ A++ +V+AGLG+ Sbjct: 180 SPIPLERLQDELFVLREQGSGTRNAVQRVLEERGMNLRGGLEMSSNEAIKQSVQAGLGLG 239 Query: 237 ARPVEMMSPD-----LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQ-AMESYHNP 290 + ++ + LRVL+ PL YL+ + A+ Q ++ H Sbjct: 240 VVSIHTVALELELGRLRVLNVEGF--PLERQWYLVHRSGKRLSPAAEAFRQFILDEAHRH 297 Query: 291 WQYS--PMSAPEGDDSL 305 WQ P AP + L Sbjct: 298 WQVPETPGVAPPQEPPL 314 >UniRef50_C8Q8U4 Transcriptional regulator, LysR family n=1 Tax=Pantoea sp. At-9b RepID=C8Q8U4_9ENTR Length = 290 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 80/292 (27%), Positives = 129/292 (44%), Gaps = 8/292 (2%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + D++ LR+FV D + AAA C +QSA+S+Q+++LEQ + L R Sbjct: 1 MNTFDMEQLRSFVTAVDAGSLTAAAPQRCLSQSALSEQLRKLEQRANQTLLVRSKSGVTP 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G +LL +AR +L D A L L G + +G +D + LL R + YP+ Sbjct: 61 TAAGEKLLHHARHLLALADVAWRDLQGVTLSGEIRLGITDYCRPDAIVALLARYARDYPQ 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRP------SAFKALNLRTSPTHWYCAAEYIL 181 L L + ++A + + ++DL V P A L P W A+ Sbjct: 121 LRLRTTMGKSAEIDAAWQRGDLDLAVVMRVPGLSRVGEAKAETRLFCEPLLWVSASALSW 180 Query: 182 QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVE 241 + P+PLVLL + L++ PW + +++S + ++ AV AGLG+ Sbjct: 181 VQ--PLPLVLLPEGCMLHRAACQALSREHHPWFVRHISSGVRGLQDAVAAGLGIACLNRS 238 Query: 242 MMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQY 293 M + V+ LP LP+ E++L P+ +E Q E Y Sbjct: 239 AMPREGVVVVQQPSLPRLPEAEFVLLSRPADQSEFGQTCAAFAEILQQTLAY 290 >UniRef50_C3BJ72 YwqM (Probable transcriptional regulator YwqM) n=4 Tax=Bacillus RepID=C3BJ72_9BACI Length = 298 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 65/297 (21%), Positives = 130/297 (43%), Gaps = 19/297 (6%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L+TF+ VA+ F A + TQS ++ ++ LE+ +G LF R G+ +LT+ Sbjct: 1 MELRHLKTFIIVAESGGFTRAGEQLGYTQSTITNHIRSLEEEIGNPLFDRLGKKVILTDV 60 Query: 71 GIQLLGYARKILRFNDEAC-SSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +L YA KIL ++EA SS M G + IGA++ LP +L YP++ Sbjct: 61 GEHMLSYAHKILELSNEALESSQMNGKFSGTIRIGANESLMIYRLPAVLYEFKRKYPQVH 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALN---LRTSPTHWYCAAEYILQKGEP 186 + ++ + + L+S + D + TH + L ++ L K Sbjct: 121 IILQPSESQELHNELKSGKFDFALFTHPEQLGTDIVTHSLVQEKIVLIAPPKHPLTKKVS 180 Query: 187 IP-------LVLLDDPSPFRDMVLATLNKADIPW-RLAYVASTLPAVRAAVKAGLGVTAR 238 + ++LL +P +RD++ + + I + + ++ A++ V GLG++ Sbjct: 181 VSPADLEGEMLLLTEPGSYRDLLERRIKEDGINCSHIHF--WSIEAIKQTVMCGLGISYL 238 Query: 239 PVEMMSPDLRVLSGVDGLPPLPDTEYL----LCYDPSSNNELAQVIYQAMESYHNPW 291 P + ++ + LP +++ + + + + +E + W Sbjct: 239 PFITVKEEIEQ-GKLSVLPWTYSKDFVTTELAYHKSKWLTPAMKKLIEMIEKHAEKW 294 >UniRef50_A6VSC2 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VSC2_MARMS Length = 302 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 76/274 (27%), Positives = 134/274 (48%), Gaps = 1/274 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD +LL+T VA+ D +F AA RT SA+S QM+RLE+ VG +LF + GR+++LTE Sbjct: 18 LDTELLKTLVAIVDHGSFQRAAMQTFRTPSAISMQMKRLEEQVGTDLFCKQGRDQVLTED 77 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G QL+ YAR+IL+ + A S+ +L +G ++ +L +++ + S+ P + Sbjct: 78 GQQLVHYARQILQLQESALQSIKGPQQGVLLNLGCPNDYVANLLVVIMSVMESMLPNIRF 137 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 +R ++ + E+++ EVDL + T P + + L L W + P+ L Sbjct: 138 RIRTGTSSELRELMDKGEVDLALVTRTPDSDEGLTLFQDKGVWVAKKGFDWTTLNPLSLA 197 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 L + F + L K ++L V + L + + + A ++A ++ L ++ Sbjct: 198 LYESSCKFHSSAVDGLQKKGTDYQLYCVTANLTLIESLLMAEKAISAIASISVNDSLEII 257 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 D LP LP E S+ + L + + Sbjct: 258 -ASDLLPSLPAVEIAFSRSASAPDWLTVAWIEEV 290 >UniRef50_A0B0Y3 Transcriptional regulator, LysR family n=4 Tax=Burkholderia cenocepacia RepID=A0B0Y3_BURCH Length = 291 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 85/280 (30%), Positives = 129/280 (46%), Gaps = 1/280 (0%) Query: 6 RPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNK 65 R NLDL LLR FV+VAD + AA A+ TQ A+SQQ+ RLE L G LF R RN Sbjct: 3 RMTRNLDLALLRAFVSVADHRSMTAAGHALHLTQGAISQQVARLEMLSG-PLFVREHRNL 61 Query: 66 LLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVY 125 LLT G +LL AR++L +D + L ++G + +GA + T L +L + + Sbjct: 62 LLTAAGERLLEQARRLLAAHDALLAELTAGAVEGTVRVGAPQDLVGTCLAPILKSYTHAH 121 Query: 126 PKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGE 185 P++AL + + + L +D+ + + + + W A + Sbjct: 122 PRVALTLVCAASPELRRGLTHGNLDVALIEAPVGSSRGECIAVDRLVWVGAKGGTAHRHS 181 Query: 186 PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSP 245 P+P+ ++ FR VL L D PWR + + A A V+A L VT + P Sbjct: 182 PLPVSMVAQTCAFRPTVLDALRGCDRPWRTVFENGSFDATAATVRADLAVTVWLASTVPP 241 Query: 246 DLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 DL +L GLP LP+ L + A + + + Sbjct: 242 DLEILPAGGGLPALPNFSINLHVPRGQHTPAATELARYLR 281 >UniRef50_Q1LIS5 Transcriptional regulator, LysR family n=35 Tax=cellular organisms RepID=Q1LIS5_RALME Length = 345 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 84/294 (28%), Positives = 129/294 (43%), Gaps = 14/294 (4%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + + D LRTFVAVAD + +AAA + +QS+VS+Q+++LE+ G L R + + Sbjct: 50 MRGFETDQLRTFVAVADSGSLSAAAPRLFLSQSSVSEQLRKLEERAGVPLLTRGKKGAAV 109 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G +LL YAR+IL N+ A L +L G L + +D + +L R+ YP Sbjct: 110 TPAGARLLEYARRILSLNELAMQELRGQSLDGELRLAVTDYFRPGEIAGMLRRLRDRYPY 169 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTH----------RPSAFKALNLRTSPTHWYCAA 177 L L V V ++A + E E D+ ++ + LR W A Sbjct: 170 LKLHVTVMKSAAIEAAAEMDEFDIGLSMRLIRSGGDAAPHERRKSGVVLRREALAWVAAP 229 Query: 178 EYILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA 237 E +PLVLL D V+ L + + + + AS + + A+ AGLGV+ Sbjct: 230 EIAESPQATLPLVLLPDTCSMHQFVVQLLKRRRRAFDIGHSASGVAGLHLALAAGLGVSC 289 Query: 238 RPVEMMSPDLRVLSGV----DGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 + P + L LPPLP E+ L +E QA+ Sbjct: 290 LNASAIGPGVAPLDAAATAGWKLPPLPSAEFYLLGARRGESEFIGQARQALAEQ 343 >UniRef50_B8IHA3 Transcriptional regulator, LysR family n=2 Tax=Methylobacterium RepID=B8IHA3_METNO Length = 283 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 79/272 (29%), Positives = 133/272 (48%), Gaps = 2/272 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D LLRT AV +F+ AA + QS VSQ +QRLE +G+ L AR + T Sbjct: 5 IDPILLRTLTAVVRSRSFSRAAEQLSLRQSTVSQHVQRLEAQLGRRLIARDTHSVAPTPE 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LG+AR +L ++ +L +QG L GAS++ T L + YP + Sbjct: 65 GEAVLGFARTVLDAHERLERTLAGGAVQGRLRFGASEDFVQTRFAEALRDFRASYPSVDF 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 ++ V + E +E ++DL + R + L +R W + ++ EP+ ++ Sbjct: 125 ELSVSFTQLLGEAVERGDLDLFLGKRRVGEAQGLLVRRDRLVWVGLPSALPERDEPVSIL 184 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 PS R + L L + WR++ ++L +RAA AGLG+ + +++ L+ L Sbjct: 185 TFPAPSITRAIALEALARESRAWRISCTCASLSGLRAAALAGLGLMVQARSLIADGLQEL 244 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQ 282 +G D LP LP+ E++L P E ++ + Sbjct: 245 AGTD-LPRLPEVEFILA-GPGLQREPSRTLAH 274 >UniRef50_B6FPK4 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPK4_9CLOT Length = 301 Score = 230 bits (587), Expect = 6e-59, Method: Composition-based stats. Identities = 67/247 (27%), Positives = 111/247 (44%), Gaps = 10/247 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + + LRTFV V + A+ + +Q +VS +Q LE LF R G+ +TE Sbjct: 1 MTIRHLRTFVIVFQKESITKASEILHVSQPSVSLAIQELENYYHIRLFDRIGKRLSITEQ 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L YA I+ DE + + N +G L IG+S + ILP L+ Y ++ + Sbjct: 61 GKWLYDYALHIVSMFDEMETEVKTWNNKGTLRIGSSITIGNFILPQLIEEFQKRYREVEI 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRP--SAFKALNLRTSPTHWYCAAEYILQKGEPI- 187 V V + + + + EVDL + + + +L P CAA L K E I Sbjct: 121 KVSVCNTKTIEQYILNNEVDLALIEGKTEYEQIQMEHLMEDPLCLICAANSELVKQEKIS 180 Query: 188 -------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 P++L + S R+M+ +L I R+ + + + A+ AV LG++ P Sbjct: 181 LIDLERYPMILRERGSAVREMIEESLGYHQIHHRVIWESVSTQAIIRAVAKKLGISILPY 240 Query: 241 EMMSPDL 247 ++ +L Sbjct: 241 LLVRDEL 247 >UniRef50_B9Y467 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y467_9FIRM Length = 309 Score = 229 bits (586), Expect = 7e-59, Method: Composition-based stats. Identities = 72/308 (23%), Positives = 137/308 (44%), Gaps = 15/308 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + L LR FV V + AA ++ +Q AVS +++LE G LF R + LTE Sbjct: 1 MTLRHLRIFVEVCRTGSITKAAESLHLSQPAVSLAIRQLEDYYGILLFDRISKKLYLTES 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G ++L YA I+ D+ + L + G L IG+S + +LP L+ R + +P++ Sbjct: 61 GNKMLSYASHIIESFDDMETQLKNWDSAGTLRIGSSISTGTQMLPQLVRRFNLRFPQIRT 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFK--ALNLRTSPTHWYCAAEYILQK----- 183 V + + + + + + ++DL + + + T A ++ L + Sbjct: 121 QVLIDNSRIIEDKVLTNQLDLALVESLSYSPDIVCVPFYTDRLIVITAPKHPLTQNPECT 180 Query: 184 ---GEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 P++L + S R++V A L A++ + +++ ++ AVK +G++ P Sbjct: 181 VKALADYPVLLREPGSGTREVVDALLVTAEVQITPLWESTSTRSIINAVKENIGISILPY 240 Query: 241 EMMSPDLRVLSGVDGLP---PLPDTE-YLLCYDPSSNNELAQVIYQAMESYHNPWQYSPM 296 E++ +++ V GLP PLP+ ++ + AQ + + Y N S Sbjct: 241 ELVKNEIQS-GAVAGLPLASPLPNRTCSIIHHRNKYLTPSAQAFIEVCQEYSNLSTESFQ 299 Query: 297 SAPEGDDS 304 + E S Sbjct: 300 TEEERQSS 307 >UniRef50_C6Q178 Transcriptional regulator, LysR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q178_9CLOT Length = 303 Score = 229 bits (585), Expect = 8e-59, Method: Composition-based stats. Identities = 80/301 (26%), Positives = 133/301 (44%), Gaps = 30/301 (9%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + + L+TF+ VA L F AAA + +QS VS ++ LEQ + +LF R GR L E Sbjct: 1 MYIRQLQTFLVVARLLNFRAAAEELNYSQSTVSDHIRNLEQELDVKLFERFGRKVFLNEQ 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSN-LQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +L+ A+K+++ +E ++G L IG+++ LP LL S +YP + Sbjct: 61 GEKLISPAKKMIKDAEEIHKLFDNDEKIKGTLKIGSAETLCVFWLPPLLKEYSKIYPDVQ 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALN---LRTSPTHWYCAAEYILQ---- 182 + +++ + EMLE +D + H SA + L+ L T + A + L Sbjct: 121 IILKMADCLELPEMLEKNIIDAAFSLHDESAQQQLSQIDLFQDSTIFVAAPNHPLTSVKK 180 Query: 183 ----KGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + E +L + + + L +I S+L A++ VK GLG+T Sbjct: 181 ITAYELENQAFILTESKRGYSFELKKLLENLNIKTNTIMELSSLEAIKQCVKNGLGITLL 240 Query: 239 PVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN-PWQYSPMS 297 P ++ +L+ L LP E+ Q++ QA YH W P+ Sbjct: 241 PRIVVDKELQ----NGELVILPV-------------EINQILIQAKMIYHREKWMSPPLL 283 Query: 298 A 298 A Sbjct: 284 A 284 >UniRef50_A6UAC5 Transcriptional regulator, LysR family n=5 Tax=Rhizobiales RepID=A6UAC5_SINMW Length = 293 Score = 229 bits (585), Expect = 9e-59, Method: Composition-based stats. Identities = 87/288 (30%), Positives = 148/288 (51%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + +D DLLRTF+A A+ + A AA V RT SAV+ QMQRLE L+G+ + A GR ++L Sbjct: 1 MRPIDPDLLRTFLAFAEGGSLARAAIVVNRTPSAVTAQMQRLEALIGERILAPAGRGRVL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G +L +AR+IL + +A SL + G + +G++ + ADT+LP LL + +P+ Sbjct: 61 TPIGEELAAHARRILDAHRDAWLSLRGARADGRIVLGSTQDFADTMLPGLLRLFARSHPR 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + LD+R+ R+ + + ++D+++ + +A L + W C+ ++ + + Sbjct: 121 IRLDLRIGRSKELTIAFDQGQIDILLAMRQSAAADELIVLREQMLWLCSDRGLVTDTDEV 180 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL +LD P FR ++ L +R+A + +L +RAAV + + VT R +S + Sbjct: 181 PLAVLDAPCGFRTAAISVLEATGRRFRIAATSPSLSGLRAAVLSSIAVTTRTELFLSAGI 240 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSP 295 LP LP E+ L + A + + W P Sbjct: 241 GRAPEHLALPSLPPAEFSLRLRTRAEEPAADLAALLADELRQDWAQRP 288 >UniRef50_Q2RHB2 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RHB2_MOOTA Length = 297 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 67/250 (26%), Positives = 108/250 (43%), Gaps = 15/250 (6%) Query: 14 DLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQ 73 + L TF AVA+ +F+ AA + TQ A+S +Q LE+ G L R+ R LTE G Sbjct: 4 NQLLTFKAVAEQKSFSRAARVLHLTQPAISLHIQSLEEYFGTRLLDRNNRQVTLTEAGRV 63 Query: 74 LLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALD 131 L YA ++ R DE +L ++G L +GA+ + LP + YP + + Sbjct: 64 LYNYALELSRLYDEVKKALADISGKVKGNLVVGATLTIGEYFLPSIAGEFKRQYPDVEIT 123 Query: 132 VRVKRNAYMAEMLESQEVDLMVTT---------HRPSAFKALNLRTSPTH-WYCAAEYIL 181 +R+ + E+DL + L L P H W E Sbjct: 124 LRIANTQEIICRTLDGELDLALIEGQAKHPNLIQEDLFQDELVLIIHPEHRWAGRREITP 183 Query: 182 QKGEPIPLVLLDDPSPFRDMVLATLNKADIP---WRLAYVASTLPAVRAAVKAGLGVTAR 238 ++ PL+L ++ S R + A L KA + ++ + A++ AV+AGLGV Sbjct: 184 EELREEPLILREEGSGTRQITEAGLRKAGLELSTLKVVMELGSTQAIKEAVEAGLGVAII 243 Query: 239 PVEMMSPDLR 248 + ++R Sbjct: 244 SRLAIKKEIR 253 >UniRef50_C7HXZ5 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7HXZ5_THIIN Length = 312 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 77/280 (27%), Positives = 140/280 (50%), Gaps = 12/280 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 D+ LL+ +AVAD + AAA +CR+QSAVS+Q+++LE+ G LF R + LT Sbjct: 7 FDITLLQALIAVADAGSLTAAAPRLCRSQSAVSEQIRKLEEHCGALLFHRGKKGISLTPA 66 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LLG+AR+++ ++ + L G L + +D T++ LL +V YP L L Sbjct: 67 GQRLLGHARQLVAQHECVYQEMRGMQLAGDLRLAITDYFRPTVIAQLLRQVRMRYPHLRL 126 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKA----------LNLRTSPTHWYCAAEYI 180 V ++++ + + D+ ++ + A L++ P W ++ Sbjct: 127 HVSIRKSEIIESGQADTDFDIGLSMRILDSHAARRSQTSKAKRLHVLREPLAWIAEPSWV 186 Query: 181 LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 + G+P+PLV+L D + ++ TL+ +P+ +A+ AS + ++ A+ AGLG++ Sbjct: 187 HEGGKPLPLVVLPDTCALQQFIVRTLHANRMPYFIAHSASGVLGLQLALAAGLGISCLNA 246 Query: 241 EMMSPDLRVLSG--VDGLPPLPDTEYLLCYDPSSNNELAQ 278 + +R + LP LPD E+ L + L + Sbjct: 247 SAIPAGMRRMDPSADCPLPDLPDVEFSLRVPHEKADALVE 286 >UniRef50_UPI00016C47B2 transcriptional regulator, LysR family protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C47B2 Length = 291 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 73/249 (29%), Positives = 113/249 (45%), Gaps = 13/249 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQL---VGKELFARHGRNKLL 67 ++L LR FVAVA+ +F AA TQ +S+Q+ RLE VG+ LF R GR +L Sbjct: 1 MELHQLRYFVAVAETGSFTRAAEREDVTQPTLSEQIMRLESKPHGVGRRLFDRLGRKVVL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T+ G +LLG+A+ IL EA ++ S G L +GA A +LP + R +P Sbjct: 61 TDAGRELLGHAQGILAAVKEAERAVRDSAEGGSLRVGAIPTIAPFLLPGTVTRFRKDHPN 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTH--RPSAFKALNLRTSPTHWYCAAEYILQKGE 185 + L ++ + L + E+D+ + R L P A++ L Sbjct: 121 VQLQLKEDLTERLLADLLAGELDVALMAMPVRDDRLHVEKLFAEPLVMALPAKHELASKT 180 Query: 186 PI--------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA 237 + P +LLDD F D VL+ ++ + R+ + + A V AG GV+ Sbjct: 181 EVKLADVLEEPFILLDDMHCFGDQVLSLCHRGGLEPRVVCRGEQIVTLLAMVAAGQGVSI 240 Query: 238 RPVEMMSPD 246 P + D Sbjct: 241 VPEMAATAD 249 >UniRef50_C6IVL6 Transcriptional regulator YwqM n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVL6_9BACL Length = 302 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 62/297 (20%), Positives = 126/297 (42%), Gaps = 15/297 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++ L TF+ V + +F AA + QS+V+ Q+Q LE +G LF R GR +LT+ Sbjct: 1 MESRHLFTFLVVVEAGSFTRAAQQLDYAQSSVTAQIQALEAEIGLPLFDRIGRKIVLTDA 60 Query: 71 GIQLLGYARKILRFNDEACSSLM-FSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL YA++I + ++ A ++L + + G L IGA + A LP ++ YP + Sbjct: 61 GRRLLPYAQEIAKIHEMAKNALHPAAEMAGSLKIGAPESLAAFRLPEVIRHYRQRYPLVQ 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHR---PSAFKALNLRTSPTHWYCAAEYIL-QKGE 185 + ++ + + +++ S E+D+ + L P A++ L + E Sbjct: 121 IVLKPGQCWELRDLVRSGELDVAFLLQPEVEDRDLQIETLVHEPMALVAPADHPLRHEAE 180 Query: 186 PIP-------LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 +P ++ + +R + LN + ++ A++ V +GLGV+ Sbjct: 181 VVPDQLKDQTILHTESGCSYRTLFERYLNSHGVFPDPNLEFWSIEAIKQCVMSGLGVSFL 240 Query: 239 PVEMMSPDL---RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQ 292 P+ + +L +++ L + + + + W+ Sbjct: 241 PLVTVRSELAEGKLVKLNWNDESQRVATQLALHRKKWRSPALEQFVLMIREQAERWR 297 >UniRef50_C0CUF5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUF5_9CLOT Length = 302 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 63/301 (20%), Positives = 126/301 (41%), Gaps = 10/301 (3%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +++ L LR F+ V + + AA + Q +VS ++ +E+ G +LF R + LT Sbjct: 1 MDVTLRHLRIFLTVCEAGSMTGAANRLFTAQPSVSLAIREMEEYYGVKLFDRISKKLFLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 E G Q+L YAR I+ DE + ++ G L +GAS +LP + ++ +YP+L Sbjct: 61 EAGHQVLEYARHIIALFDEMEQEVRNPDMSGTLRVGASITVGTFLLPGYVKELTRLYPEL 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTH--RPSAFKALNLRTSPTHWYCAAEYI------ 180 ++ R++ + + + + S E+DL V + + + C + Sbjct: 121 RVEARIENSNNIEKCVLSNEIDLGVIEGIAHSRYISSESFHGDRLAFVCPPGHRFAGKQD 180 Query: 181 --LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 L + +L + S R++ ++ R+A+ +++ A+ V AG G++ Sbjct: 181 VKLGDLQSESFILREKGSAGREIFDGLAAAHELDIRIAWQSTSNQAIIHGVAAGFGLSVL 240 Query: 239 PVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSA 298 P + + + S + E C N LA+ + + + + Sbjct: 241 PASLAAEGVERGSIAEFSVEGLSMERKFCVIYHKNKFLARGARELIRLFKEGGERKLPLP 300 Query: 299 P 299 P Sbjct: 301 P 301 >UniRef50_Q13GY4 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13GY4_BURXL Length = 294 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 86/288 (29%), Positives = 139/288 (48%), Gaps = 11/288 (3%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + DL+LL T VAD + +AAA + R+QSAVS+Q+++LE+ G LF R + L Sbjct: 2 MRRFDLELLNTLSVVADAGSLSAAAVQLHRSQSAVSEQIRKLEESCGLALFLRGKKGASL 61 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G +LL +ARK+L ND A + +L G L + +D T + +L ++ YP Sbjct: 62 TPAGARLLDHARKLLLLNDVAYRDMQGLSLAGDLRLAITDYFRPTDIAKVLKQLGDQYPS 121 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPS-----------AFKALNLRTSPTHWYCA 176 L L V V ++A + S D+ V+ ++ +R P W A Sbjct: 122 LRLHVSVYKSALIRRDAGSGNFDIGVSMRVADPAGNESPVEKNGLASIMIRREPLQWVAA 181 Query: 177 AEYILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 + P+PLV L D + +LA LN+A + +A+ AS + +++A+ AGLG + Sbjct: 182 PSFERVPHGPLPLVALPDTCSLQRYMLARLNEAGADYFIAHSASGVAGLQSALSAGLGFS 241 Query: 237 ARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 + D+ L + LP LP E+ L ++ LA I + + Sbjct: 242 CLNASAIPDDVVPLRSIKTLPKLPHVEFNLIIPDVASQLLAGEIAKLL 289 >UniRef50_B7GI02 Transcriptional regulator, LysR family n=2 Tax=Bacillaceae RepID=B7GI02_ANOFW Length = 304 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 65/281 (23%), Positives = 120/281 (42%), Gaps = 17/281 (6%) Query: 1 MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR 60 M+ + R ++L L TF VA N+F A+ + QS+V+ Q+++LE+ LF R Sbjct: 1 MMGSGR---RMNLHYLHTFREVAKWNSFTKASEMLGYAQSSVTTQIKKLEEEFDVVLFER 57 Query: 61 HGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFS-NLQGVLTIGASDESADTILPFLLN 119 G LT+ G +LL YA KI+ DEA +L L G L+IG + A LP L Sbjct: 58 WGGKIKLTDAGAELLEYANKIISLIDEAKQNLSEQTELAGSLSIGTIESVAGFYLPPYLQ 117 Query: 120 RVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVT---THRPSAFKALNLRTSPTHWYCA 176 + K+ L ++ + + ++ + DL + + ++ P Sbjct: 118 AFKQKHSKVNLLLQQNICNRLVKGVKEGKYDLAIILDEKREDPDLNVIVIKQEPLVLVAK 177 Query: 177 AEYILQKGEPI--------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAA 228 ++ L + + I L++ + +R+++ +I + ++ A++ Sbjct: 178 PDHRLTRLDKIDIHALGDEKLIVTEQGCSYREVIGNLYRNYNIRFEYTIELGSIEAIKRC 237 Query: 229 VKAGLGVTARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYD 269 V GLG+ P+ + +L G P+P+ E L Sbjct: 238 VAYGLGIAFLPLMAVEAELE--KGRLVRVPIPEAEIHLFLQ 276 >UniRef50_A9CFW9 Transcriptional regulator, LysR family n=5 Tax=Proteobacteria RepID=A9CFW9_AGRT5 Length = 293 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 81/290 (27%), Positives = 135/290 (46%), Gaps = 5/290 (1%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + LD++ + FV +ADL +F AA + TQ A+S +++RLE +G+ L R R+ L Sbjct: 4 MSTLDVEAVEAFVTIADLQSFTRAAETLGTTQGAISVKLKRLEDRLGQRLLERTPRSVRL 63 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 + G L AR+ L +D A + L S+ + +G + A +P LL R++ P Sbjct: 64 SAQGAVFLAPAREFLAAHDRALAGL--SSPRRRFGLGIAAHVAGPEVPTLLARLNDHDPG 121 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 L ++VR+ + + + + E+D + L WY ++ ++GEP+ Sbjct: 122 LTIEVRMDHSRSLLDAFDRGEIDAAIIRREDDRRDGEVLGPEHFGWYATPQFEHRQGEPL 181 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 L L R++ L+ A I W ++ T V AAV AGL ++A + P Sbjct: 182 RLAALSPACGVRNIATHALDAAAIAWTEVFLGGTSSMVTAAVSAGLAISAFSCRLAPPGT 241 Query: 248 RVLSGVDGLPPLPDTEYLLC--YDPSSNNELAQVIYQAMESYHNPWQYSP 295 +S GLPPLP +E ++ S + E + + A H P SP Sbjct: 242 VEVSQRFGLPPLPSSEIIMFSTLTDSRSREALRTLAAAFRE-HRPGPISP 290 >UniRef50_A5MZU7 Predicted transcriptional regulator n=3 Tax=Clostridium RepID=A5MZU7_CLOK5 Length = 289 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 59/257 (22%), Positives = 108/257 (42%), Gaps = 11/257 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + L FV V D AA + +QSAVSQ + LE G LF R R +T+ Sbjct: 1 MTLRHFNIFVVVCDKMNMTKAAEQLFISQSAVSQVISELEGHYGVRLFERLSRKLYITQA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LL YAR I++ N E + + G + IGAS +LP L+++ V + + Sbjct: 61 GEKLLSYARYIIKLNMELENDMKTLGENGSIRIGASVTIGAYVLPKLISQFQKVNSETDI 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNL--RTSPTHWYCAAEYILQ------ 182 V + + +ML E+D+ + + +N+ C + + Sbjct: 121 KVYEENTEKVEKMLLQDEIDIALVEGETTHTDIINVPFMEDELVLICGSGHRFAKLTCIE 180 Query: 183 --KGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 + E ++ + S R + + + W++++ + ++ AV GLG++ Sbjct: 181 PYELEKEKFIIRERGSGTRRTFEDKMKENHLKWQISWTCNNTDTIKIAVSEGLGISVISR 240 Query: 241 EMMSPDLRVLSGVDGLP 257 + +L VL + +P Sbjct: 241 CSVINEL-VLGTLCEIP 256 >UniRef50_Q1ZA42 Putative uncharacterized protein n=2 Tax=Bacteria RepID=Q1ZA42_PHOPR Length = 345 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 70/226 (30%), Positives = 112/226 (49%) Query: 17 RTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQLLG 76 RTFV VA AA A+ R+Q+AVS QM+RLE+LVG L R R LT+ G LLG Sbjct: 64 RTFVMVAKTGELKKAAEAIFRSQAAVSMQMKRLEELVGCTLMERSNRGIQLTDAGETLLG 123 Query: 77 YARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVRVKR 136 Y+ + L+ N+ S+L +L G G + A L + + ++ P L + R Sbjct: 124 YSEQFLKLNNATFSALNERDLSGQFNFGVPTDYAQDFLNYFMPVLTREIPNLEARIVCDR 183 Query: 137 NAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLVLLDDPS 196 + + E LE+ E+D+ + L L + W + L++ + +P+ + DD Sbjct: 184 SRNLREKLEAGELDIAIVAGEADYTDDLLLWSERLIWSASTHINLKELKEVPVAIYDDNC 243 Query: 197 PFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEM 242 D+ ++ L KA+I +R + +S L V AV +G ++ P M Sbjct: 244 IVSDLCISGLKKANISYRQVFSSSILENVATAVHSGFAISLLPESM 289 >UniRef50_B1KU62 Transcriptional regulator, LysR family n=10 Tax=Clostridium RepID=B1KU62_CLOBM Length = 293 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 57/249 (22%), Positives = 106/249 (42%), Gaps = 12/249 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++ LR F VA+ A + +Q AVSQ + LE +G +LF R R LT Sbjct: 1 MNERKLRIFYEVAEKLNMTEVAEKLYISQPAVSQTILELESELGVKLFDRINRRLYLTNE 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L Y R+IL D+A SL S G L IGAS ILP ++ + + Y + Sbjct: 61 GELFLNYVRRILNMYDDAIRSLKDINSLKTGKLKIGASTTIGIYILPDIIGKFTKQYKGI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKAL--NLRTSPTHWYCAAEYILQKGEP 186 + ++ +++M+ +D + + N + + E+ + Sbjct: 121 DTSIAIENTKLISDMILDNSIDFAFVEGPVYNEEIIKENFCDDELVFITSPEHPWSNKDE 180 Query: 187 IP--------LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 I +++ + S R++ + + ++ + +A+ A++ AV+AGLGV+ Sbjct: 181 ISITEVDKEKIIMREIGSGTREVFESYMTANNVNYNIAFELGNTEAIKKAVEAGLGVSCI 240 Query: 239 PVEMMSPDL 247 + ++ Sbjct: 241 SKRCIKNEI 249 >UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AG49_CARHZ Length = 297 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 61/298 (20%), Positives = 117/298 (39%), Gaps = 24/298 (8%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++ + L F VA+ +F+ AA + +Q A+S +Q LE+ G +L R + LT Sbjct: 1 MNRNQLEIFRVVAEKKSFSEAARLLHISQPAISMHIQALEEYYGTKLLDRTTKRVTLTPA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSN--LQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L Y +L D+A + + ++G L +GAS +LP LL+ YP + Sbjct: 61 GEILYKYTLHLLSLMDKAQRDISQAAGIIKGKLILGASLTIGGHVLPPLLSSFYRKYPDV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRP--SAFKALNLRTSPTHWYCAAEYIL----- 181 + + + + E + +DL L AA + L Sbjct: 121 NITMEIMNTEKVLERVSDLTLDLGFVEGEVTTGELHVEALARDELVVVVAANHPLAGRGR 180 Query: 182 ---QKGEPIPLVLLDDPSPFRDMVLATLNKADI---PWRLAYVASTLPAVRAAVKAGLGV 235 ++ +PLV+ + S R ++ L A ++ + A++ AV+AGLG Sbjct: 181 ISWEELATLPLVMREPGSGTRKVIEERLQAAGFKLPELKIVMELGSTEAIKGAVEAGLGA 240 Query: 236 TARPVEMMSPDL------RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 + ++ ++L P+ Y++ + ++ Q + Q + Sbjct: 241 AILSKWTVRREINWGIFKQLLIENL---PIYREFYVVLNNNKFHSPATQALIQFCREH 295 >UniRef50_D2LGY9 Transcriptional regulator, LysR family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LGY9_RHOVA Length = 311 Score = 226 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 77/284 (27%), Positives = 134/284 (47%), Gaps = 9/284 (3%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR-HGRNKLLT 68 + L+ LR FV VA+ +FA A+ + RTQSAV+Q +++LEQ++ L R G LT Sbjct: 15 RITLEQLRAFVMVAEGGSFAGASLDLGRTQSAVTQSLKKLEQILDCVLLERRQGHFAGLT 74 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G + L A++IL +A S L G + +G D+ + +L+R + P+L Sbjct: 75 IEGARFLPMAKEILARLSDAVGSFQRPPLAGRIRLGVPDDFDVLDIHGVLSRCLDMNPEL 134 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTH------RPSAFKALNLRTSPTHWYCAAEYILQ 182 ++V + + +M + E+D+ + LR+ P W + L Sbjct: 135 RIEVTSAMSGTIVDMFNAGEIDVALLNRARGESPNVGGAPRKVLRSEPLFWVGREKSALG 194 Query: 183 KGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEM 242 + +PLV +R +L + + P LAY +S+ +R AV AGLG+ P Sbjct: 195 QFSTVPLVGFPGGCTYRKTMLLAMQRVGKPSYLAYTSSSYENIRKAVSAGLGIAVLPRGS 254 Query: 243 MSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 + D +L + PPLP+ E ++ + + ++L + +ES Sbjct: 255 VGRDHVILGAEEDFPPLPEAELVMVAN--ARDDLYRKFAAFLES 296 >UniRef50_A4J1K6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J1K6_DESRM Length = 308 Score = 226 bits (578), Expect = 6e-58, Method: Composition-based stats. Identities = 64/256 (25%), Positives = 117/256 (45%), Gaps = 15/256 (5%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 + L L F VAD +F+ AA A+ +Q AVS ++ LE +LF R+ + +T Sbjct: 1 MLLSLYQFHIFKTVADKKSFSGAAQALYISQPAVSMHIKALEDHFRTKLFDRNTQQVTIT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYP 126 E G L YA KIL D+A + + N++G L+IGAS + ++P +L + +P Sbjct: 61 EAGRILYKYADKILNLIDQAENDISRFTGNIEGPLSIGASFTVGEYVIPKILGTFNKEHP 120 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFK--ALNLRTSPTHWYCAAEYILQKG 184 ++ ++V + ++ QE+DL + ++ + + A +Y L + Sbjct: 121 QVRALLQVTNTEQIVNLVLKQEIDLGLIENQVNKTELVAKPFLQDELIIVIPPDYPLSEH 180 Query: 185 E--------PIPLVLLDDPSPFRDMVLATLNKADIP---WRLAYVASTLPAVRAAVKAGL 233 + +PLV+ + S R + A L + + + + AV+ AV+AG Sbjct: 181 QFISMEDLVALPLVMREQGSGTRKITEARLIEEGVDLNTLNIVMELGSTEAVKEAVEAGF 240 Query: 234 GVTARPVEMMSPDLRV 249 G T + +L++ Sbjct: 241 GTTIISKWAVQKELKL 256 >UniRef50_Q1IRZ3 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRZ3_ACIBL Length = 296 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 69/247 (27%), Positives = 112/247 (45%), Gaps = 12/247 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +++ LR F AVA TF A+ Q ++SQQ+ +LE +G LF R R+ LT Sbjct: 1 MEVHQLRYFCAVARHGTFTRASEVEHVAQPSLSQQILKLEAELGARLFDRLPRSAKLTVF 60 Query: 71 GIQLLGYARKILRFNDEACSSL--MFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L A +ILR DEA + L M SN +G +T+G A +LP LLN +S +P + Sbjct: 61 GKAFLPNAERILRQLDEAKTELLEMTSNEKGEVTVGIIPTIAAYLLPKLLNGLSVRHPDV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTH--RPSAFKALNLRTSPTHWYCAAEYI------ 180 + + + + L +D+ + + + L + ++ Sbjct: 121 TVKISEDITPVLLQRLHDGSIDMAIAALPIPGTELASEELFEEKFYAVLPEKHRRASRAS 180 Query: 181 --LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 L P +LL + FRD V+A N+A + + + + + A V AG+GV+A Sbjct: 181 ISLADLNREPFLLLKEGHCFRDSVIAACNQAAMSPSVVFESGQFATILAMVSAGMGVSAV 240 Query: 239 PVEMMSP 245 P + P Sbjct: 241 PAMAVQP 247 >UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KYF2_THERP Length = 299 Score = 226 bits (577), Expect = 8e-58, Method: Composition-based stats. Identities = 70/286 (24%), Positives = 124/286 (43%), Gaps = 18/286 (6%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +++ L L+ F +VA +F+ AA + +Q AVS Q++ LEQ++G LF R GR LT Sbjct: 1 MDVSLRQLQVFRSVARHRSFSRAAEDLVISQPAVSAQIKSLEQVLGVPLFQRTGRGVELT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSL--MFSNLQGVLTIGASDESADTILPFLLNRVSSVYP 126 E G QLL YA ++L DEA +++ + +G + + AS + ++P L YP Sbjct: 61 EAGRQLLPYAERLLNLLDEALAAVHELRCAQRGQVRVAASTTAGIYVVPKALGAFHRAYP 120 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLMVT--THRPSAFKALNLRTSPTHWYCAAEYILQKG 184 + L + V + + L + + D+ + P + + + + L + Sbjct: 121 GVELSLDVLNRFAVHQRLLAGDADVAIMGLIEDPQDLEIEQFLPNELVVIASPRHHLARR 180 Query: 185 EPIPL--------VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 IPL ++ + S R + +A + R+A + A++ AV A LGV Sbjct: 181 HQIPLDEIAREPFLVREIGSGTRADMERIFAEAGLSPRVAMELRSNGAIKQAVAADLGVA 240 Query: 237 ARPVEMMSPDLR----VLSGVDGLPPLPDTEYLLCYDPSSNNELAQ 278 P + + +L ++ V G P + L A Sbjct: 241 VMPRDAIGLELETGRLIVLDVQGFPV--RRWWSLVRRAGRQPSAAA 284 >UniRef50_P96725 Uncharacterized HTH-type transcriptional regulator ywqM n=3 Tax=Bacillus RepID=YWQM_BACSU Length = 293 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 59/250 (23%), Positives = 105/250 (42%), Gaps = 14/250 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L TF+ A+ F A + QS+V+ Q++ LE+ +G LF R G+ +LTE Sbjct: 1 MELKQLITFITAAEHVNFTLTAKMLNYAQSSVTSQIKSLEEEIGTPLFERLGKRLILTEA 60 Query: 71 GIQLLGYARKILRFNDEACSSL-MFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G YA+KI+ +EA + G L IGA++ LP ++ +P++ Sbjct: 61 GKTFKSYAQKIIALTEEAKMATNQVRETTGTLKIGATESQCTYRLPPIIKEFKQAFPQVK 120 Query: 130 LDVRVKRNAYMA-EMLESQEVDLMVTT---HRPSAFKALNLRTSPTHWYCAAEYILQKGE 185 L + + A E L ++D+ A +L A ++ Sbjct: 121 LIFKPYISNEQAKEQLLQGQLDITFILDVNRMEDALHVESLIQDEIKMVAANDHPFPADL 180 Query: 186 PI--------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA 237 P+ L+L +D +R + L+ + I ++ A++ V AGLG+ Sbjct: 181 PVTLKDLQNETLLLTEDGCSYRTLFENNLHDSGIYPN-KLEFVSIEAIKQCVMAGLGIGI 239 Query: 238 RPVEMMSPDL 247 P + D+ Sbjct: 240 LPEMTVKDDI 249 >UniRef50_UPI0001745DD5 transcriptional regulator, LysR family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745DD5 Length = 290 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 72/290 (24%), Positives = 123/290 (42%), Gaps = 14/290 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L LR VAVA F+ AA +Q ++SQQ+Q+LE +G+ LF R R+ LT+ Sbjct: 1 MELHQLRYMVAVARTGNFSRAAQTCHVSQPSLSQQIQKLEDELGERLFDRLRRHAKLTQA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSN--LQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G + L A +IL D A +N QG +T+G A +LP L+ S+ YP + Sbjct: 61 GERFLPRAVRILEEMDAATREARAANDLDQGRITVGVLPTIAPYLLPKLIAAFSAKYPGV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHR--PSAFKALNLRTSPTHWYCAAEYILQKGEP 186 + V A + E+ + EVD+ + + F+ L + L + Sbjct: 121 QVVVHEDTTARLRELTAACEVDIAIASLPLQDERFEVRELFDEELLLALPNNHRLVDQKK 180 Query: 187 I--------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 I +L+ + D VL ++ D +++ ++ + V++ V++G+G+T Sbjct: 181 IIPEDLLEEKFILMKEGHCLGDQVLHFCHRQDFHPQVSCRSAQMETVQSLVQSGMGITLV 240 Query: 239 PVEMMSPDLRVLSGVDGL--PPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 P + D V L P T + A + ME Sbjct: 241 PRMALQEDRSVKPVYRSLSDPSPKRTIVAFWPRQRPLGKAAAAWLKLMEE 290 >UniRef50_B6R8G5 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R8G5_9RHOB Length = 292 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 75/283 (26%), Positives = 128/283 (45%), Gaps = 3/283 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDLD LRT V +AD +F AA + +TQSA+S QM+R+E + + +F R GR+ LTE Sbjct: 5 LDLDSLRTLVMIADTGSFTRAAEELDKTQSAISMQMRRMEDKLERTIFRREGRHSKLTED 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LL +AR++LR NDE + + G + +G ++ +T ++ S PK Sbjct: 65 GELLLRHARQMLRLNDETLAMFSEREVTGKVRLGLAEGIDETRTAKIIFEFSKNNPKAEA 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVT---THRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + A + + LE+ E+DL + + L + W + + L + + Sbjct: 125 SIVCAPAADLRKALEAGELDLAIIGSLADEAENAEGSVLSSERLVWAAGSNFKLASEKEL 184 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL + + R + L D +R+ Y +S V +G+ +T +P + Sbjct: 185 PLAVGLEQCRIRKAAVEALEDDDRAFRIQYSSSNPGLVEMTAASGMAITIQPRSSLVSSD 244 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNP 290 L ++GLP LP+ L S+ + A + + Sbjct: 245 AGLLELEGLPKLPNYVVKLVRGKESHFKAANALSDHLAKSFEK 287 >UniRef50_C0F0J2 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0F0J2_9FIRM Length = 297 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 15/251 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + + R F+AVA+ AA + TQ VS ++ +E+ G F R + +TE Sbjct: 1 MSIRHFRIFIAVAEEENITKAAKKLYLTQPTVSVAIKEIEEHYGARFFERINQRLHITEE 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G + L YA+ + DE + ++ G L +GAS +P L+ YP + + Sbjct: 61 GKRFLDYAKHFIAMYDEMEIAFKNTDFTGRLRVGASVNIGTYYIPRLIREFRDRYPGINV 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPT------------HWYCAAE 178 V++ A + + L ++DL + ++ ++ P H Sbjct: 121 QVKINTTAVVEKELLDGKLDLALVG---GTIQSEHIVAEPLFYEKYTAICAPEHPMAGKT 177 Query: 179 YILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 L++ PL+ + S ++ + +N+ + + +++ + AV GLGVT Sbjct: 178 VPLEEFMKEPLLSREKSSGAYEVFQSAVNQTGLTVTPVWESTSQTTLMEAVHYGLGVTIV 237 Query: 239 PVEMMSPDLRV 249 P +M+ ++R Sbjct: 238 PEQMIKREVRE 248 >UniRef50_B8DKN9 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=B8DKN9_DESVM Length = 699 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 70/250 (28%), Positives = 108/250 (43%), Gaps = 12/250 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L LRTF AVA L +F AAA + QS VS ++ LE +G LF R GR LTE Sbjct: 1 MELRDLRTFAAVARLLSFHRAAAELNAAQSTVSARIAALETELGVRLFERLGRRVALTEA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF-SNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +L+ YA K++ DEA + + S L+G+LT+ + LP ++ +P++A Sbjct: 61 GERLVQYAAKLIDVEDEARAWVTGESRLRGLLTVRVPESLCAYRLPPVIAAFRRRHPEVA 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTH---RPSAFKALNLRTSPTHWYCAAEYILQKGEP 186 L + + + L DL R L P A + L + Sbjct: 121 LHLTACTLNGLEKDLRQGITDLAFVMADSVRGGDLNVEALGVEPLVLVAAPHHPLAARDR 180 Query: 187 I--------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + LVL +R ++ L I S+ A+R V +G+G+T Sbjct: 181 VVARDLHGITLVLSTTDCAYRTVIEEALAAEGIQPAAGLEFSSASALRGCVASGVGITLL 240 Query: 239 PVEMMSPDLR 248 P + +LR Sbjct: 241 PEAAVRDELR 250 >UniRef50_B1MM13 Putative LysR-family transcriptional regulator n=2 Tax=Corynebacterineae RepID=B1MM13_MYCA9 Length = 294 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 89/294 (30%), Positives = 134/294 (45%), Gaps = 4/294 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD +LLRTF+ V F AA + QS VS + RLEQ VG+ELF R RN T Sbjct: 2 LDPELLRTFLTVERAGGFTAAGRILGLRQSTVSGHIARLEQSVGRELFRRDTRNLAPTAD 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G ++G+AR IL +A S L G++ +GASD+ LP +L + +P + L Sbjct: 62 GAAMVGFARSILDAQAQADRFFASSELTGLIRLGASDDLVARELPDVLVEFQNSHPGVDL 121 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 ++ V + Y+ + + E+DLMV P L W +P+P+V Sbjct: 122 ELVVGLSEYLKTRMTAGELDLMVAKRLPGETHGELLWRDKLVWAGRPN-THHVRDPVPVV 180 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 PS R L L + WR+A V+ + +RAA AG+GV A ++ L + Sbjct: 181 TYPPPSLTRHAALRALEREGRTWRIACVSDSQLGLRAAALAGMGVIAHAESLLPSGLVKV 240 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM--ESYHNPWQYSPMSAPEGD 302 S D LP L + E++L S +E Q + A+ ++ + Sbjct: 241 SD-DSLPDLGELEFVLLRRRSVLSEPEQALCDAIVASTHRLHGDFGFTKGAGAG 293 >UniRef50_A5N2N1 Predicted transcriptional regulator n=3 Tax=Clostridium RepID=A5N2N1_CLOK5 Length = 298 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 58/249 (23%), Positives = 111/249 (44%), Gaps = 12/249 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L TF + L +++ AA + QS ++ Q+Q LEQ + +LF R GR+ LT Sbjct: 1 MELRNLITFCKITHLKSYSKAAKELGYAQSTITTQIQLLEQELNIKLFERIGRSIKLTSK 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNL-QGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G+ L YA+ I+ EA ++ +++ G L IG + LP LL YP + Sbjct: 61 GLIFLKYAQNIVNLAHEAKEAINDTDIPTGTLRIGTVESLCTMKLPELLRNYHKKYPDVE 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRT---SPTHWYCAA--------E 178 + +++ + + +ML++ VDL+ P L P + Sbjct: 121 IIIKLGICSDLRDMLKNNIVDLIFILDDPVMDSDLISCMSYNEPMAVLASPLNKLAYKNN 180 Query: 179 YILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 ++ + PL+L + +R+ +++ + L+ + A++ + LG+T Sbjct: 181 LTIEDIKDEPLILTESGCSYRNAFEKIFHESGLSPHLSLEVGNVEAIKNFTMSNLGITLL 240 Query: 239 PVEMMSPDL 247 PV + +L Sbjct: 241 PVMTVKKEL 249 >UniRef50_D1RYM9 Transcriptional regulatory protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RYM9_SEROD Length = 293 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 73/281 (25%), Positives = 141/281 (50%), Gaps = 7/281 (2%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD+ + F+ VA+L++F AA ++C TQ+ V+ ++QRLE+++G+ LF R RN L++ Sbjct: 5 LDIHTVEAFLKVAELSSFTLAAESLCITQAGVTIKIQRLEKILGQPLFHRTPRNVYLSQE 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L AR +L + A S+ +N + IG SD D F+L ++ Y + + Sbjct: 65 GKSFLPKARALLDAHFIAIRSINMANENKEINIGISDHVIDHQFMFILTQLRQRYSDILI 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 V V ++ + + E++++D+ + T LR WY A ++ + + +PL+ Sbjct: 125 KVIVDGSSSILQQFENKKIDIAIITQDGDKKGGEYLRQESYGWYGAIN-MMAEIKKLPLI 183 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSP----D 246 L + R +++ L + W ++ L A+ AA K GLG+ P+ ++SP + Sbjct: 184 TLKESCRLRKLIIDLLLEHGKDWYDSFQGGGLNAILAATKMGLGIAPLPLGLLSPVDRLE 243 Query: 247 LRVLSGVDGLPPLPDTEYLLCYD--PSSNNELAQVIYQAME 285 L ++ LP +P ++ + + EL + + ++ Sbjct: 244 LIDVTERFNLPKIPSASVVVYDNCLDLCSRELLRELVSLIK 284 >UniRef50_Q15PU3 Transcriptional regulator, LysR family n=4 Tax=Alteromonadales RepID=Q15PU3_PSEA6 Length = 283 Score = 223 bits (570), Expect = 5e-57, Method: Composition-based stats. Identities = 74/280 (26%), Positives = 128/280 (45%), Gaps = 3/280 (1%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + L LD LRTFV V DL +A A + R+Q A+S Q++RLE + K LF++ G+ + Sbjct: 1 MKQLSLDNLRTFVTVIDLGGYAKAGEYLGRSQPAISLQIKRLESQLNKRLFSKAGQRHEV 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 G+ L A+ +L NDE ++++G L +G E A T+LP ++ S +YP Sbjct: 61 NHDGLNLYHQAKNMLAINDEIFRQFEPASIRGRLRLGIPSEFATTLLPSIVGEFSKLYPD 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSA-FKALNLRTSPTHWYCAAEYILQKGEP 186 ++L+V + + + Q+ DL++ + L W Sbjct: 121 VSLEVTSALSKSLLSENQRQDFDLIMALLPHNQTVDGELLLDDDLVWVGNRNQNF-TNNT 179 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 + LVL D +R V+ L + WR+ Y + L + AA+ GLG+TA + + Sbjct: 180 LSLVLAPDGCMYRSRVIQALKQQTTQWRITYTNADLAGITAAINQGLGITALARSSVPKE 239 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 L ++ + LP L L + + + + ++S Sbjct: 240 LNII-RHEMLPDLGKIRIALFNQAQRYWQASDKLAEFIKS 278 >UniRef50_B7WU46 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WU46_COMTE Length = 283 Score = 223 bits (568), Expect = 9e-57, Method: Composition-based stats. Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 4/279 (1%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + +L++ LRT +AV++ + AAA + +QSAVS+Q+++LE VG++L R Sbjct: 1 MASLEISQLRTLIAVSEAGSLTAAAPRLFLSQSAVSEQIRKLEDCVGQQLLLRGKAGVTP 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G+QLL +AR+I DEA L +L+G + + +D +L +L +++ ++P Sbjct: 61 TGSGLQLLEHARRITAMADEALLDLRGESLRGRIRLAVTDYFKPGLLARMLKQLAHIHPG 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNL--RTSPTHWYCAAEYILQKGE 185 + ++V V R+ + + S DL + A L + W A + Q+ Sbjct: 121 VRMEVSVLRSVEVHAAVSSGRSDLGLVMSLDGAQSQLQPMGCSEALVWASAPGW--QQAG 178 Query: 186 PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSP 245 P+PL++L + + L K I + +A+ AS + +++A+ AGLGV + Sbjct: 179 PLPLLVLPQSCALHQLAIRELEKRAIAYEIAHQASGVAGLQSAIAAGLGVACINASAQAE 238 Query: 246 DLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 + + LP LP + L EL + + Sbjct: 239 GVVQVPAGLNLPGLPRVWFGLLPAKGEEPELLGQVRALL 277 >UniRef50_A8RPQ8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RPQ8_9CLOT Length = 296 Score = 223 bits (568), Expect = 9e-57, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 109/249 (43%), Gaps = 10/249 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + L+ FV V + + AAA+ + Q ++S + +E G +LF R R LTE+ Sbjct: 1 MTFRHLKIFVTVCETGSMTAAASQLFIAQPSISLAISEMEDYYGVKLFDRISRKLYLTEN 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G + L YAR I+ DE + + G L +G S +LP + ++ YP L + Sbjct: 61 GRRALQYARHIIDLLDEMEQGVRDVDAMGRLKVGTSITIGTYLLPGYIKKLKQQYPALKV 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFK--ALNLRTSPTHWYCAAEY-----ILQK 183 + + + + + + ++D+ + + + + + C A + L++ Sbjct: 121 EASIANSGTIEQQILDNDIDVGIIEGVAHSPFILSESFAGDRLVFICPAGHEFAGKTLEE 180 Query: 184 GEPIP---LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 + +L + S R++ L ++ R + +++ + VKAGLG++ P Sbjct: 181 LSEVRNQDFILREKGSAGREIFDGILAAQELNVRPIWQSASNQVILQGVKAGLGISILPY 240 Query: 241 EMMSPDLRV 249 ++ D+R Sbjct: 241 FLVRQDIRE 249 >UniRef50_C6P9X7 Transcriptional regulator, LysR family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P9X7_CLOTS Length = 297 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 112/252 (44%), Gaps = 12/252 (4%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 ++++ L F++V +L + + AA + TQ A+SQ + LE +LF R G+ +LT Sbjct: 1 MDMNFRELNIFLSVCELGSMSEAARHLYMTQPAISQAISELEGEYNIKLFDRIGKKLVLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYP 126 G L Y +KI +EA ++L G L +GAS +LP L+ +Y Sbjct: 61 HAGEILRDYGKKINLLLNEAENTLRDISDMKMGKLKLGASRTVGTYLLPQLIGEFLKIYK 120 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLMVTTHR--PSAFKALNLRTSPTHWYCAAEYILQK- 183 + L + + + +M+ E+DL + + + C+ ++ K Sbjct: 121 NIELPFYIDNTSEIVKMIHENEIDLGIVEGPIHSDNIEVKYFLDDELYLICSKDHNWAKK 180 Query: 184 ----GEPIPL---VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 + + L ++ + S R++ TL +I + + ++ A++ AV+A LGV+ Sbjct: 181 KIINKDDLSLENIIIREVGSGTREVFENTLKAHNIEYNIKLELNSTEAIKRAVEANLGVS 240 Query: 237 ARPVEMMSPDLR 248 + +L+ Sbjct: 241 VISKLAIKEELK 252 >UniRef50_P20668 HTH-type transcriptional regulator gltC n=17 Tax=Bacillales RepID=GLTC_BACSU Length = 300 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 13/248 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L LR F+ VA+ + AA + QSA+S+Q+ LE+ + LF R GRN LT Sbjct: 1 MELRQLRYFMEVAEREHVSEAADHLHVAQSAISRQIANLEEELNVTLFEREGRNIKLTPI 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G + L + + ++ D A + +G + IG A +LP +++ YP + Sbjct: 61 GKEFLIHVKTAMKAIDYAKEQIDEYLDPHRGTVKIGFPTSLASQLLPTVISAFKEEYPHV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALN---LRTSPTHWYCAAEYILQKGE 185 +R ++ E + ++++DL + P+ F + L T + + L K + Sbjct: 121 EFLLRQGSYKFLIEAVRNRDIDLALLGPVPTNFSDITGKILFTEKIYALVPLNHPLAKQK 180 Query: 186 PIPL--------VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA 237 + L VL + R+M + T +A ++ L A++ V AG+GVT Sbjct: 181 TVHLIDLRNDQFVLFPEGFVLREMAIDTCKQAGFAPLVSTEGEDLDAIKGLVSAGMGVTL 240 Query: 238 RPVEMMSP 245 P + Sbjct: 241 LPESTFAE 248 >UniRef50_C3AM26 YwqM (Probable transcriptional regulator YwqM) n=3 Tax=Bacillus RepID=C3AM26_BACMY Length = 304 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 105/248 (42%), Gaps = 12/248 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +++ L+TF + +L + AA + QS V+ +Q +EQ +G+ LF R G+ +LT+ Sbjct: 1 MEIRHLKTFKTIVELGGYTRAADYLGYAQSTVTGHIQAIEQEMGQPLFNRLGKKMVLTDV 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSN-LQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LL YA +++ +++A N + G + IGA + LP +L+ YPK+ Sbjct: 61 GKHLLPYANEMIALSEKAKQIPSVDNEITGKIVIGAPESLTIYRLPSILHEYKKKYPKVK 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMV---TTHRPSAFKALNLRTSPTHWYCAAEYILQK--- 183 + ++ + L+S +D+ T L + +Y + + Sbjct: 121 ITLKASTCRELRNDLKSGNIDIAFLLDTERHEEDLHIEQLVMEQMAFVFPKDYTVTQTDS 180 Query: 184 -----GEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + + + +R L + I + ++ A++ V GLG++ Sbjct: 181 QDVQFSQEETFLYTERGCSYRAFFEHYLQRQGIQHESTFEFWSIEAIKQCVMCGLGISLL 240 Query: 239 PVEMMSPD 246 P+ + + Sbjct: 241 PIITVGQE 248 >UniRef50_B0N992 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B0N992_EUBSP Length = 335 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 61/249 (24%), Positives = 108/249 (43%), Gaps = 10/249 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + L L FV+V + N+ AA A+ Q +VS ++ LE+ G +LF R GR TE Sbjct: 1 MTLRHLNIFVSVYEYNSITKAADALHIAQPSVSLVIKELEEYYGIQLFDRIGRGITPTEA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +L YA I+ +E + + G L IGAS ILP L+ +P L + Sbjct: 61 GKELYSYAIHIVSLFNEMAQRIKNWDNVGTLRIGASITIGTHILPGLIKEYQKDFPYLRI 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKAL--NLRTSPTHWYCAAEYI-------- 180 V V ++A + + + ++D+ + ++P + L E Sbjct: 121 KVTVNKSATIEQHILDNKIDIGLIENQPDHPEILSQPFMKDNLCAIVPNEDPLSSKAYIT 180 Query: 181 LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 L++ P ++ + S R+++ A + +I + +S+ A+ V LGV P Sbjct: 181 LEELASRPFLMREKGSAGREILDACFSLKNIHVNPLWESSSTQAIVKGVSMNLGVAVLPY 240 Query: 241 EMMSPDLRV 249 ++ D+ Sbjct: 241 LLIKRDIEE 249 >UniRef50_UPI0001A44853 LysR, substrate-binding protein n=2 Tax=Pectobacterium carotovorum RepID=UPI0001A44853 Length = 295 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 5/261 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR-HGRNKLLTE 69 + L+ LR FV++A+ F A + RTQS +S ++RLE+ VG L R G LTE Sbjct: 13 ITLEQLRIFVSIAECGGFGRAGEELGRTQSTLSAGLKRLEEDVGCRLIERRQGHILGLTE 72 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G QLL AR IL A +L S + G + +G D+ L +++ P L Sbjct: 73 EGRQLLPAARDILLRTHRAIGALQKSPMTGRVALGVPDDFEVKNLHDIISLCLEENPGLK 132 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAF----KALNLRTSPTHWYCAAEYILQKGE 185 +++ + ++ M+ Q +D+++ LR HW + + + Sbjct: 133 VEITAASSTVLSSMVAQQRLDVVILKGLAGQPLISETERILRVESLHWVSSGAVNFSEMD 192 Query: 186 PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSP 245 +PLV D R ++ L P+ +YV+ + +R+A GLG+ +S Sbjct: 193 EVPLVTFPDGCVIRKCAVSALEHVGRPYYFSYVSGSFDNIRSAAAKGLGIGLLSKSALSD 252 Query: 246 DLRVLSGVDGLPPLPDTEYLL 266 L VL DG P +P + +L Sbjct: 253 ALYVLGPEDGAPSVPAIQLVL 273 >UniRef50_Q21IY2 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=Q21IY2_SACD2 Length = 299 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 70/292 (23%), Positives = 124/292 (42%), Gaps = 15/292 (5%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 I ++D D L+ F+AVA+ ++F+ AA + TQ AVS+++ LEQ + LF R GR+ L Sbjct: 2 ITSMDTDGLKAFLAVAEHHSFSVAAQHLFITQPAVSKRIAALEQELNHILFDRLGRDVAL 61 Query: 68 TEHGIQLLGYARKILRFNDEACSSLM--FSNLQGVLTIGASDESADTILPFLLNRVSSVY 125 TE G LL A+ IL EA ++ + G L + S LP +L ++ + Sbjct: 62 TEAGQALLPRAQAILNSMHEAQRTIREFSGEIVGTLRVATSHHIGLHHLPPILREFAANH 121 Query: 126 PKLALDVRVKRNAYMAEMLESQEVDLMVTTHRP---SAFKALNLRTSPTHWYCAAEYILQ 182 ++ L + E + + DL V T P +A L P + A + L Sbjct: 122 KQVNLQFDFLDSEQAHEKVLRGDCDLAVVTLAPTLEENLEASVLWPDPLCFIVGANHPLA 181 Query: 183 KGEPIPL--------VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLG 234 + I L +L D + +V + + L + L ++ V GLG Sbjct: 182 TSKNISLEELSRTPAILPDLNTYTGRLVKHFFDTQGLALNLNMATNYLETIKMMVTVGLG 241 Query: 235 VTARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 + P M+ L++L + L ++ + + A+ ++ + + Sbjct: 242 WSVLPKTMVDSSLKILPIKN--IQLERQLGVVIHKKRTLGNAARAFFEVLSA 291 >UniRef50_B5YJV7 Transcriptional regulator n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJV7_THEYD Length = 302 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 61/265 (23%), Positives = 119/265 (44%), Gaps = 20/265 (7%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++ L+ F VA+ +F+ + + TQ AVS Q+Q LE+L +LF R + LT Sbjct: 1 MEDHKLKVFCTVAETKSFSKTSEIIHLTQPAVSLQIQALEELYETKLFDRSSGSITLTPA 60 Query: 71 GIQLLGYARKILRFNDEACSSLM--FSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L YA++IL EA + ++G + IGA + ILP + +PK+ Sbjct: 61 GEILYKYAKQILTMYAEAAKEISKITGLIKGCVKIGAGTTVGNYILPAVAVDFKKRHPKI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALN--LRTSPTHWYCAAEYILQKGEP 186 + V + + EML S +D + + P K + + + C+A++ L + Sbjct: 121 RVSVSIGNAKKILEMLNSSMIDFGIISEMPGKSKFIVDSIISDELCVICSADHPLNNQKS 180 Query: 187 I--------PLVLLDDPSPFRDMVLATLNKADIP---WRLAYVASTLPAVRAAVKAGLGV 235 + P V+ ++ S R ++ L + + ++ + + +++ AV+ G+G+ Sbjct: 181 VSLYDVVKEPFVIREEGSSTRVIIEKFLAEHGLSVSDLHISLILGSTGSIKEAVERGIGL 240 Query: 236 TARPVEMMSPD-----LRVLSGVDG 255 + + + LR+L +G Sbjct: 241 SIVSKWAIRKEVSCGNLRILKLKEG 265 >UniRef50_A1B0X3 Transcriptional regulator, LysR family n=11 Tax=Proteobacteria RepID=A1B0X3_PARDP Length = 288 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 79/280 (28%), Positives = 128/280 (45%), Gaps = 1/280 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD LLR FVA+ D +F AA + TQS +SQQ+ RLE G L R R L T Sbjct: 2 LDPRLLRAFVAIVDSGSFTRAAERLHMTQSTISQQLARLEDAAGHALIDRAARPVLPTPQ 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LLGYAR+IL EA ++L + + +G ++ + + + + +P++ L Sbjct: 62 GERLLGYARRILALQQEAAAALGDPSGTSSIRLGLPEDIFNPEMCGIFRDFTRQFPQIRL 121 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 DV V + + + E+D++V T W+ +A +P+PLV Sbjct: 122 DVTVGLSRELMRRYRAAELDIVVVKEPAPDSDCRAHFTEAMAWFESALLPRDWQDPVPLV 181 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD-LRV 249 + +RD + A + + W +A+ S+LP+V V+ GLG+T PV +S LR Sbjct: 182 VFPPGGLYRDAMFARIERERRRWYVAFSGSSLPSVILGVEGGLGITLLPVAAVSGARLRR 241 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 G P + + Y S + ++ E + Sbjct: 242 CDSFGGEPAMVVSIYSWESAGSIGRLIGEMTGLLSERHRR 281 >UniRef50_A9WIA6 LysR substrate-binding n=4 Tax=Chloroflexaceae RepID=A9WIA6_CHLAA Length = 307 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 15/253 (5%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 + L+L LLR +VAV + +F AA + +QSAVS+ +Q LE+ +G L R R T Sbjct: 15 VTLNLHLLRIYVAVLEQGSFTKAAEVLTMSQSAVSRAVQELERQLGTTLLERRARGVAPT 74 Query: 69 EHGIQLLGYARKIL---RFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVY 125 G L +AR+I R EA + L +G L IGAS +LP LL Y Sbjct: 75 MAGTILGEHARRIFTHERLAIEALNELRGLQ-RGRLAIGASSTIGIYLLPPLLGNYHRRY 133 Query: 126 PKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNL---RTSPTHWYCAAEYILQ 182 P + L + + + E L S ++D+ +A + L + R+ + ++ L Sbjct: 134 PGIELFLDIGNTQQIIERLLSYQIDVAYVEGPVAANEDLQVVPWRSDEMVVIASPDHPLT 193 Query: 183 KGEPI--------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLG 234 + + P ++ + S R ++ L ++ R + AV+ AV AGLG Sbjct: 194 RRVTLDCSDLQDAPFIMREPGSGTRKVMEQALAAHNVTVRPVMELGSTEAVKQAVSAGLG 253 Query: 235 VTARPVEMMSPDL 247 ++ + +L Sbjct: 254 LSMVSRFTIQSEL 266 >UniRef50_Q5X4A2 Hydrogen peroxide-inducible genes activator n=4 Tax=Legionella pneumophila RepID=Q5X4A2_LEGPA Length = 296 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 71/293 (24%), Positives = 130/293 (44%), Gaps = 17/293 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L FV +AD+ F AA +Q +S Q+++LE+ +G LF R + LLT+ Sbjct: 1 MNLRDLHYFVILADVKHFGEAAKRCFVSQPTLSMQIKKLEEELGVVLFERTNKQVLLTDQ 60 Query: 71 GIQLLGYARKILRFNDEA--CSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G +LL RKIL DE + G L +G + +LP ++ + + YP+L Sbjct: 61 GSKLLDRTRKILILIDEMKELARQSEDPFTGELRLGVIPTVSPYMLPLVMPELKNEYPRL 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHR-PSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + + + + LE E+D+ + F L ++ CA + L + + + Sbjct: 121 KVWLIEDKTHRLITKLEQGELDVAIMALPIDKRFSCQILYEEKFYFACANTHPLAQAKSV 180 Query: 188 --------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARP 239 P++LL++ R+ +A A + A++L +R V+AG+GVT P Sbjct: 181 NINDLKNQPIMLLEEGHCLREQAMAVCQLAKADDIADFTATSLETLRLMVQAGMGVTLLP 240 Query: 240 V-EMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSN-----NELAQVIYQAMES 286 ++ L + P P L + + N +A++I + ++S Sbjct: 241 ALSTLTASTNHLKCIPFSEPAPSRILGLFWRAGTPRQVCFNAVAELITKNVQS 293 >UniRef50_A5V9A5 Transcriptional regulator, LysR family n=3 Tax=Alphaproteobacteria RepID=A5V9A5_SPHWW Length = 278 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 97/277 (35%), Positives = 148/277 (53%), Gaps = 6/277 (2%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +NL ++LR+FVA+ D + AA V TQSA+S Q++RLE+LV K LF R GR LT Sbjct: 3 VNLPTNMLRSFVAIVDAGSMLNAAERVFVTQSALSLQIKRLEELVQKPLFHREGRRLALT 62 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LLGYAR++L +DEA +++ G + +G + AD +L LL R S ++ Sbjct: 63 AAGELLLGYARRVLALHDEALAAVTAGQFAGPVRVGMVQDFADLLLSGLLARFSELHADA 122 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 + RV A + EML ++DL++ P A +RT+P+ W+ + L +P Sbjct: 123 QIFARVAGTAELQEMLARGQLDLLIGYAAPG--DAHAVRTAPSIWFG--DDALTLKAELP 178 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L +L+ P FR+ +A L+ A PWR+A L +RAA+ +GLGV++R + Sbjct: 179 LAVLEKPCRFREAAIAALDAAGRPWRIAVETPNLSTLRAAIASGLGVSSRTGLFLRDLPA 238 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 V G+ LPPLPD ++ + A+E Sbjct: 239 VTPGL--LPPLPDVACIVARAQPDRAAAGHLHELAVE 273 >UniRef50_A9KJB0 Transcriptional regulator, LysR family n=4 Tax=Clostridiales RepID=A9KJB0_CLOPH Length = 300 Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 62/251 (24%), Positives = 120/251 (47%), Gaps = 12/251 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +++ ++TF+ VA F+ AA + +QS ++ Q+Q+LE+ +G +LF R G+ LTE Sbjct: 1 MEIRNIKTFIKVAATQNFSKAAEQLGYSQSTITIQIQQLEKELGTQLFERIGKQVSLTEQ 60 Query: 71 GIQLLGYARKILR-FNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G L +A +I+R N+ A + S +G L IG+ + A ILP LL R + PK+ Sbjct: 61 GEVFLNHANEIMRVTNEAAVFARETSTPEGTLRIGSVESLATAILPELLLRFHNACPKVE 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHR----------PSAFKALNLRTSPTHWYCAAEY 179 ++ + + M+ + E+DL +T + + + TS H + E Sbjct: 121 TIIKTDMSDGLINMVRNNEIDLFLTLDQKIYGSEWVRAVQQEEDIIFVTSSKHSFSGKEK 180 Query: 180 I-LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 I ++ + P +L + +R + L++ +I + + ++ G+GV+ Sbjct: 181 INIETLQNEPFLLTEKGVSYRYELERILSEKEIVIKPVLEIGNTETIIHLLEHGMGVSFL 240 Query: 239 PVEMMSPDLRV 249 P+ +S + Sbjct: 241 PMFSVSKSIER 251 >UniRef50_C8Q3I4 Transcriptional regulator, LysR family n=1 Tax=Pantoea sp. At-9b RepID=C8Q3I4_9ENTR Length = 286 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 87/264 (32%), Positives = 133/264 (50%), Gaps = 2/264 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 L +FVAV + +F AA V +QS VSQQ++RLE++VGK L R +TE Sbjct: 7 FTPQQLLSFVAVCETASFTRAADRVHLSQSTVSQQVRRLEEMVGKALLQRTSHQVAVTEE 66 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LLGYAR+I+ N EA L GV+ +G ++ A LL S +P+L L Sbjct: 67 GEKLLGYARRIIALNGEAHDVLSDKWRDGVMRLGVPEDFAAPT-AGLLADFSRQHPQLRL 125 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 DV + + +E+D+M+ P + L R P W +AE+ P+PLV Sbjct: 126 DVMSGMYVDLHAAWQREELDIMLIKQ-PGGERPLAARPEPLLWLDSAEHPCFGQTPLPLV 184 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 + +R+ + TL+ WR++Y +++L A+ +A AGLG+T P P+ RVL Sbjct: 185 VFPQLGLYREEMCQTLDSLGRSWRISYSSTSLVALASAAAAGLGLTLLPASCRLPEHRVL 244 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNN 274 +GLP + E L ++ Sbjct: 245 GDAEGLPVISHFELALFCRQPQDH 268 >UniRef50_A0RKW5 Transcriptional regulator, LysR family n=81 Tax=Bacillus RepID=A0RKW5_BACAH Length = 306 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 107/249 (42%), Gaps = 12/249 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +++D+L+ FV V + F+ AA + +Q VS ++ LE G L R ++ +TE Sbjct: 10 MNVDILKIFVTVVEQKHFSRAAELLNLSQPGVSMHIRNLENEFGTTLIQRSPKHVQVTEA 69 Query: 71 GIQLLGYARKILRFNDEACSSL--MFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L +A+++L ++A + + + + G L IGAS + +LP +L ++ P + Sbjct: 70 GNILYIHAKQMLSLYEDAKQKINELHNVVTGTLRIGASFTIGEYLLPKILANYANENPHV 129 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRP--SAFKALNLRTSPTHWYCAAEYILQK--- 183 + + + + L S ++D+ + + + + L + Sbjct: 130 EVHTFISNTEDVLQSLRSNQIDIGLVEGQVVYADVDVETFMQDEMKLVVPPNHPLLRTNE 189 Query: 184 -----GEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + VL + S R +++ + + + S++ +V+ AV AGLG+ Sbjct: 190 MNESTLQDQVWVLRESGSGTRAYSDRFIHQHHLKMKRFFTFSSIQSVKEAVSAGLGIAIL 249 Query: 239 PVEMMSPDL 247 + +L Sbjct: 250 SDWTVRKEL 258 >UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CY97_PAESJ Length = 305 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 55/246 (22%), Positives = 96/246 (39%), Gaps = 13/246 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L FV VA AA + QSAVS+Q+ +LE+ +G +LF + GRN LT Sbjct: 1 MELRQLYYFVKVAKKEHVTQAAEELHVAQSAVSRQIHQLEEELGVKLFLQKGRNLQLTPV 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L A IL + A + +G + +G +++P ++ ++P + Sbjct: 61 GQLFLKRAEVILDDLERAVVEIHEFMDPEKGEIRLGFPHSLGVSVVPQVVAAFRKLHPNV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFK---ALNLRTSPTHWYCAAEYILQKGE 185 R + + E+DL + P + L T + L + Sbjct: 121 KFRFRQGMYPSLIRDMVKGEIDLAFISPFPDEHEQVCGEVLLTEELFAILPPSHPLAGEQ 180 Query: 186 PIPL--------VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA 237 I L V+ + R +V +A ++ + +R V AG+GV+ Sbjct: 181 EIDLIQLKEDTFVMFSEGYSLRPIVWEACQEAGFTPKIGFEGEETETIRGLVAAGMGVSL 240 Query: 238 RPVEMM 243 P + Sbjct: 241 LPEMAL 246 >UniRef50_C9LCS7 Putative transcriptional regulator n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LCS7_RUMHA Length = 289 Score = 220 bits (561), Expect = 5e-56, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 8/246 (3%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + L L+ F AV L + AA + Q AVS ++ LE +LF R R +TE Sbjct: 1 MTLRHLKIFSAVCRLESITLAAEEMNMAQPAVSYAIRELEGYYETKLFERMNRRLYITEA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G QLL YA IL DEA L + +G + + LP L+ Y ++ + Sbjct: 61 GEQLLIYADSILAQFDEARDVLRDIQTVTKVRVGTNASYGISYLPQLIAGFKEEYGQIPI 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHR--PSAFKALNLRTSPTHWYCAAEYILQ------ 182 V + + E L ++D +T + P F+++ + T C+++Y Q Sbjct: 121 YTLVDNSRQIEEKLIRNDLDFGITDYPSNPQFFRSVPVGTDKMIAVCSSDYSWQGSAKME 180 Query: 183 KGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEM 242 + +PL+L + S R MV A L+K + + ++ ++ A G+GV + Sbjct: 181 ELIEMPLLLRELGSGSRSMVEALLSKYKKKPEIVMESISIRSLIEACAKGMGVLLLTKSV 240 Query: 243 MSPDLR 248 + P ++ Sbjct: 241 LEPYMK 246 >UniRef50_C6CWT6 Transcriptional regulator, LysR family n=5 Tax=Bacillales RepID=C6CWT6_PAESJ Length = 302 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 69/292 (23%), Positives = 114/292 (39%), Gaps = 19/292 (6%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L TF VA F AA A+ S V+ Q++ LE+ +G LF R G+ LT Sbjct: 1 MELRQLNTFCTVATTLNFTRAAEALSYVPSNVTMQIKALEEELGVRLFDRLGKQLALTTA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF-SNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G + L +A+ +L DEA S + + L G LTI A++ LP + R S +P + Sbjct: 61 GKRFLTHAQGVLEKLDEARSVVHDNAQLSGTLTISANEVICSYRLPPVFQRFRSQHPGVR 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRP---SAFKALNLRTSPTHWYCAAEYILQKGEP 186 L R N + + L D++ P S L A ++ L K Sbjct: 121 LIFRSVPNQELKQTLFEGTTDIVYMLDEPICSSGLVVEPLVEENFRLLAAPDHPLAKRTV 180 Query: 187 IPLVLLDD--------PSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + L + P+R M + K I + A++ +G+G+ Sbjct: 181 LKLEDFHEEVFLTNEKGCPYRTMFDRSFEKEGIDSITYLEFQSAEAIKKCAISGIGIAFL 240 Query: 239 PVEMM-----SPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 P ++ +L VL +P L +L + + + +A Sbjct: 241 PEIVVEAEVERGELVVLP--WQIPDLQVYTQMLRHKDKWLSPIMLSFIEATR 290 >UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=Bacillales RepID=A9VF88_BACWK Length = 305 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 65/281 (23%), Positives = 121/281 (43%), Gaps = 19/281 (6%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 +I+++L L F+AV+ F AA + +Q ++SQQ++ LE VG LF R G+ L Sbjct: 6 VISIELRQLEYFLAVSKELHFTRAAEKLNISQPSLSQQIRALEHEVGMPLFDRIGKKISL 65 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVY 125 TE G LL +++ I ++A S++ G LTIG+ + +LP + + Y Sbjct: 66 TEAGRVLLSHSKTIFHEVEQARSAIQDLNGLHHGSLTIGSLLTVVNYLLPPAILDFNKQY 125 Query: 126 PKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFK--ALNLRTSPTHWYCAAEYIL-- 181 P + L V R + E L E+D+ +T + ++ L S + L Sbjct: 126 PNIELSVLGLRTGEIREKLLQNELDIGITFLPVQDKEIVSIPLYKSELTLVVPTSHSLTE 185 Query: 182 ------QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGV 235 ++ + PL+LL +++ + + + ST+ ++ V G+G+ Sbjct: 186 RKYVSIEELQDYPLILLPKNFYLTELITSHCQNFNFKPKPILEISTMESLIQMVAQGMGI 245 Query: 236 TARPV----EMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSS 272 T P + + ++ + + P P + L Y Sbjct: 246 TVLPKPYIDFLQNEHIQAIKIEN---PTPTIDIGLIYRRDK 283 >UniRef50_A8GAF5 Transcriptional regulator, LysR family n=2 Tax=Serratia RepID=A8GAF5_SERP5 Length = 302 Score = 219 bits (560), Expect = 8e-56, Method: Composition-based stats. Identities = 65/269 (24%), Positives = 126/269 (46%), Gaps = 2/269 (0%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 L +D LR +V D + AA + +QSAVS +++RLE+ +G+ L R G T Sbjct: 16 RLSIDALRALQSVIDTGSMTRAAQQLNLSQSAVSWKIKRLEEQLGRTLVNRQGMTLTATA 75 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LL + R+IL+ +D A + S LQG + GA+++ + L LL + +P++ Sbjct: 76 DGEALLSHGRQILQAHDRALAHFSPSLLQGKVRFGATEQMSLPQLAALLAAFTHQHPQVD 135 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKAL--NLRTSPTHWYCAAEYILQKGEPI 187 + + ++++ + LE +DL++ A L T HW + Q G+ + Sbjct: 136 VQLVIEQSQVLRNALEQGALDLVLHQQFCDTLSAEDVVLATERIHWCVPPGWRYQPGDRV 195 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 LV +R + L+ A I +++ ++ + AA+ AG+G+ + + + Sbjct: 196 KLVSYGPDCFYRRLAQERLSAAGIACQVSVECPSVAGMLAAISAGMGIGLLNQQSVDQRV 255 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNEL 276 ++ + + PLP + L ++ + Sbjct: 256 QIEANFERSLPLPPVAHALRLGARRHHPI 284 >UniRef50_B4E965 LysR family regulatory protein n=19 Tax=Proteobacteria RepID=B4E965_BURCJ Length = 353 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 100/315 (31%), Positives = 157/315 (49%), Gaps = 38/315 (12%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 N D+ LR+ VA DL +FA AA V R+ SAVS Q+++LE+ G LF + GR LT+ Sbjct: 28 NFDVAALRSLVAGVDLGSFAKAADRVARSSSAVSAQIRKLEEQAGTPLFVKAGRGLALTD 87 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +L YAR+++ NDEA +++ NL G + +G ++ + ILP +L R + +PK+ Sbjct: 88 AGNAMLHYARRMIELNDEAAAAVRGVNLDGWVRVGLQEDFGEAILPDVLGRFARAHPKVK 147 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRP--------SAFKALNLRTSPTHWYCAA---- 177 ++ RV RNA + + L++ ++DL + P + + + P W AA Sbjct: 148 IEARVARNADLLDRLDANQLDLALVWGDPASAALVSRAGIDSEAIAQVPMQWIGAAAGGG 207 Query: 178 ---------------------EYILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLA 216 + GEP+PLV+ D P F L++A +PWR+A Sbjct: 208 AGVPDGGGDAGVTGRVDETGGRAVHATGEPLPLVVFDRPCRFFGAATDALDRAGVPWRVA 267 Query: 217 YVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLS-GVDGLPPLPDTEYLLCYDPSSN-- 273 + +L + AA AGLG+T R + +RVL GLP LP +L SS Sbjct: 268 FTTPSLAGLWAAAAAGLGLTVRSHYGLPASVRVLDAASCGLPALPGLPLILLRRTSSATP 327 Query: 274 --NELAQVIYQAMES 286 + LA+++ QA+ Sbjct: 328 TVDRLARIVTQAVRG 342 >UniRef50_A4A328 Transcriptional regulator, lysr family protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A328_9PLAN Length = 301 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 70/299 (23%), Positives = 124/299 (41%), Gaps = 17/299 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L TF A A +F AAA+ QS+V+ Q+Q+LE+ +G LF R G LTE Sbjct: 1 MELKTLATFRAAAATLSFTQTAAALGYVQSSVTAQVQQLERELGVPLFDRIGNRLALTEA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +L+GYA ++L DEA +++ + G L+I + +LP +L + +P + + Sbjct: 61 GQRLVGYADRLLALADEARAAVSTTAPVGTLSISGPETIVSYLLPSILAKFRQQHPAVWV 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKAL---NLRTSPTHWYCAAEYIL------ 181 + + ++D P +L LR P A + L Sbjct: 121 RCVPSPIGELKRRVLDGQLDAAFVLEEPVVPGSLNVAPLRPEPLALIAAPSHPLVKKRRV 180 Query: 182 --QKGEPIPLVLLDDPSPFRDMVLATLNKADIPW-RLAYVASTLPAVRAAVKAGLGVTAR 238 + P++ + +R+ L+ A + A S++ A++ V AGLG+ A Sbjct: 181 QARDLAGEPILFTETGCTYRNKFEQALHAAHAHPGQKAQEFSSVEAIKRYVAAGLGIAAL 240 Query: 239 PVEMMSPDLRVLS---GVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYS 294 P + + + + P L L+ + + + + PWQ S Sbjct: 241 PSVAVEAERKSRTLAVLAWDGPQLTVHTQLVWSATRWTSPALSAFVETVMA--CPWQAS 297 >UniRef50_C0ZGB6 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZGB6_BREBN Length = 298 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 57/244 (23%), Positives = 102/244 (41%), Gaps = 12/244 (4%) Query: 17 RTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQLLG 76 +TF VA +F AA + QS+V+ Q+Q LE G LF R G+ LT G LLG Sbjct: 2 QTFREVAKCQSFTRAAEVLGYAQSSVTTQIQNLESEFGVSLFERWGKKIRLTHAGEVLLG 61 Query: 77 YARKILRFNDEACSSLMF-SNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVRVK 135 Y+ ++ DEA ++L + L G L IG + A LP L + P++ + + Sbjct: 62 YSEQLQAVLDEAKANLSEQAQLAGTLRIGTVESLAAFYLPPYLQKFRLEQPRMRIMLAPG 121 Query: 136 RNAYMAEMLESQEVDLMVT---THRPSAFKALNLRTSPTHWYCAAEYILQKGEPI----- 187 + + ++ + D S + + L A + L K E + Sbjct: 122 ICQDLRQGVKEGKFDFAFVLDWLQDQSELENVVLGEEKLVVVAAPTHPLVKKEKVETHDF 181 Query: 188 ---PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMS 244 + + +R M+ + L +A ++ +L A++ V LG+ P ++ Sbjct: 182 TGETWIFTEKGCSYRGMMESVLREAGATVESSFEFGSLEAIKQCVAYDLGIALLPKIVVQ 241 Query: 245 PDLR 248 +++ Sbjct: 242 EEVK 245 >UniRef50_UPI000178A79D transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A79D Length = 291 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 64/258 (24%), Positives = 120/258 (46%), Gaps = 13/258 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L+TF VA +F AA + QS+V+ Q+Q+LE+ G +LF R+GR LT+ Sbjct: 1 MELIYLQTFREVAVRKSFTKAADELGYAQSSVTTQIQKLEKEYGVKLFERYGRGLRLTKS 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +L YA ++L ++ L G+L+IG D A LP +L+R+ + LA+ Sbjct: 61 GEELFKYAVQMLDLFQQSKEKLTKQG-GGILSIGTIDSLAAYFLPSVLHRLRQEHEDLAI 119 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTH---RPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 ++ R + + E DL + ++ +++R P H ++ L + I Sbjct: 120 RLQTDREDSIVSKVREGEYDLGLILENKPEDTSLNWISIREEPLHLIAHPDHPLHRLPVI 179 Query: 188 PL--------VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARP 239 L ++ +D +R M+ L + P R+ A++ + +G G++ P Sbjct: 180 ELEHLADYEWIMTEDTCNYRIMLEKVLRASGAPVRIGLELGNPEAIKRYIMSGTGISLLP 239 Query: 240 VEMMSPDLRVLSGVDGLP 257 + +++ + LP Sbjct: 240 RMVAEEEIKR-GELAILP 256 >UniRef50_O32186 Uncharacterized HTH-type transcriptional regulator yusT n=3 Tax=Bacillales RepID=YUST_BACSU Length = 295 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 76/307 (24%), Positives = 127/307 (41%), Gaps = 22/307 (7%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++ LR F VA T AA + QS V+ ++Q+LE +G LF RH R L+ Sbjct: 1 MESGDLRVFQMVAREGTITKAALQLGYVQSNVTARIQQLEAELGTTLFLRHNRGMTLSAS 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFS-NLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LL YA KI+ DEA +L S G L IG + +A LP LL +P + Sbjct: 61 GKLLLDYANKIIGLLDEASKALSSSAEPSGPLMIGCTQTTAAVRLPKLLASYYEEHPNVQ 120 Query: 130 LDVRVKRNAYMAEMLESQEVD---LMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEP 186 L + ++ + + E+D + H P P A+ +++ Sbjct: 121 LSLTTGHTQFLLDKVLRYELDGAFIGCECHHPELESYPAFEEEPVVVSAASVPDVEEAIT 180 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 P+++ +R+ + L + + TL A+ V AGLG++ P ++ Sbjct: 181 KPILVYSTGCSYRETLEKWLRSVGVTQPVIMEFGTLEAIIGGVTAGLGISLLPRTVVQK- 239 Query: 247 LRVLSGVDGLPPLPD------TEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPE 300 G L PLP+ TE+++ D I A+ ++ + ++P+ E Sbjct: 240 -HEAEGSIRLYPLPEALSQMKTEFIVRKD--------SFISSALRTFMD--SFTPVKTAE 288 Query: 301 GDDSLLI 307 S L+ Sbjct: 289 SQKSSLL 295 >UniRef50_A6UC84 Transcriptional regulator, LysR family n=5 Tax=Alphaproteobacteria RepID=A6UC84_SINMW Length = 296 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 69/278 (24%), Positives = 125/278 (44%), Gaps = 4/278 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 L++D LR A+ AA A+ +QSAVS +++RLE + +L +R + T Sbjct: 8 RLEIDALRALWAIRHHGGITRAAEALGLSQSAVSHKIKRLETSLDCDLLSRRSGGPVFTS 67 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LL YA +IL +DEA SL + L G + +G ++++ T L +L R ++P ++ Sbjct: 68 AGEDLLDYAGRILGLHDEALLSLSKTQLAGRIALGLTEDTTCTDLARILGRFRRLHPHVS 127 Query: 130 LDVRVKRNAYMAEMLESQEVDLMV--TTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + ++V+ + + MLE E+D + + L HW + L + PI Sbjct: 128 VRIKVRMSLVLRAMLERGELDAAIVQVFSHEVRPTDVVLFRENLHWVKHPDLCLPQNGPI 187 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 P + DD +R L + ++ + AAVK+ LGV + ++ Sbjct: 188 PFLSFDDECFYRKWALDVGQDGGTILETVFECASAAGIVAAVKSALGVALLSERHLRAEM 247 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 ++++ D LP P Y++ + + +E Sbjct: 248 QIVT--DRLPAPPALVYVVRRARKARIPALDTLIAEIE 283 >UniRef50_C1F961 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F961_ACIC5 Length = 288 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 64/246 (26%), Positives = 113/246 (45%), Gaps = 12/246 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++ LR A+A+ F+ AA Q ++SQQ+ +LE+ +G +LF R GR+ +TE Sbjct: 1 MEFHQLRYVCAIAETGNFSRAAERCQVAQPSLSQQVLKLEEDLGVKLFDRLGRSLRITEA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L +AR IL + A +S+ +++G + +G A ++P + YP+ Sbjct: 61 GRAFLPHARSILHQMEAARASVAGKSKDVRGSVAVGVIPTIAPYLMPRYTAAFARKYPEA 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMV--TTHRPSAFKALNLRTSPTHWYCAAEYILQKGEP 186 L + + + E L + +DL V R + + L T P ++ + Sbjct: 121 RLRIVEETTPVLVESLRNLSIDLAVLALPLRHKDLECIPLLTEPMFAVLPKDHPRASAQT 180 Query: 187 IPL--------VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + L V+L D FRD+ LA + A + R+A+ + ++ V AG+GV+ Sbjct: 181 LSLKDLRGETFVMLRDGHCFRDLSLAACSHARVTPRIAFESGQFRSLFGMVAAGMGVSLV 240 Query: 239 PVEMMS 244 P M Sbjct: 241 PQMAMD 246 >UniRef50_C7I0K1 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I0K1_THIIN Length = 319 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 74/294 (25%), Positives = 123/294 (41%), Gaps = 19/294 (6%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + N + LR F A A F AA + T AVS Q++ LE VG LF R G++ L Sbjct: 1 MKNATIRQLRVFSAAARHLHFGKAAQEMHLTPPAVSMQIRELESQVGLPLFERQGKSVSL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLM--FSNLQGVLTIGASDESADTILPFLLNRVSSVY 125 T G L+ YARK+L +A ++ G LTIG A +P LL R + Y Sbjct: 61 TLTGEYLVVYARKVLATLKDAEDAMARLRGIKAGRLTIGMVST-AQYFVPRLLARFHAEY 119 Query: 126 PKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPS--AFKALNLRTSPTHWYCAAEYILQK 183 P + + + V + L++ E+DL + P A +A P ++ L Sbjct: 120 PHVEVRLSVGNREQLVSHLQNSELDLAIMGRPPRDVATRAEPFAAHPMGIIAPPQHPLST 179 Query: 184 GEPIP--------LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGV 235 G P ++ + S R L++ + L + ++ AV A +G+ Sbjct: 180 GGPHSATLLTQFNFIIREPGSGTRATFEEYLHQHQMELPLFTEMQSNETIKQAVMANMGI 239 Query: 236 TARPVEMMSPDLRVLSGVDGLPPLPDTEYL-LCYDPSSNNELAQVIYQAMESYH 288 + + + +LR + L +P E + L + N LA+++ E++ Sbjct: 240 SFLSLHTIDLELR-----NNLLTVPSIEGMPLLRRWYAVNSLAKLLSPGAEAFR 288 >UniRef50_Q65FY0 Probable transcriptional regulator YwqM n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65FY0_BACLD Length = 297 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 61/298 (20%), Positives = 119/298 (39%), Gaps = 15/298 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +++ L+TF + D+ F AA + QS V+ +Q +EQ + K LF R G+ +LTE Sbjct: 1 MEIRHLKTFKTIVDIGGFTRAADYLGYAQSTVTSHVQAIEQELRKPLFYRLGKKMMLTEA 60 Query: 71 GIQLLGYARKILRFNDEACS-SLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LL YA +++ ++A G L IGAS+ LP +L+ +S YP++ Sbjct: 61 GKHLLPYAAEMVELYEKARHIPENDQEPSGNLIIGASESLTVYRLPAILHEFTSKYPQVT 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTT---HRPSAFKALNLRTSPTHWYCAAEYILQK--- 183 + ++ + + L+ ++D+ + + L P + E+ + Sbjct: 121 VTLKSSTCWQLRDELKQGKIDVAFLLDNDRKENDLHVEKLVNEPMVFIFPKEHPAGQKAL 180 Query: 184 -----GEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + + +RD L + + ++ A++ V GLGV+ Sbjct: 181 DDLTFNANETFLYTEHGCSYRDFFEEYLRQRGVIADHTMEFWSVEAIKQCVMCGLGVSLL 240 Query: 239 PVEMMSPDLRV--LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYS 294 P+ D+ L G L T+ + + + +A + W+ + Sbjct: 241 PLITTRTDIEEGKLQGTLVRDALFSTQMVYHKNKWLSPAMA-AFTDIVRRKAREWEQT 297 >UniRef50_C0Z9T7 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z9T7_BREBN Length = 290 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 111/242 (45%), Gaps = 7/242 (2%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +++ +TF AV D N+F AA A+ +Q+ ++ +Q+LE+ +G LF R G+ LT + Sbjct: 1 MEIRQFQTFKAVVDFNSFTKAAQALQYSQATITSHIQQLEEEMGVPLFDRLGKKIQLTAY 60 Query: 71 GIQLLGYARKILRFNDEACS-SLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +L Y ++L + S +LQG L IGAS+ L +L++ + YP + Sbjct: 61 GRELYTYVEELLVSYAKIKDISANEQSLQGELRIGASETITIYRLGDILSKYRASYPGVN 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNL---RTSPTHWYCAAEYILQKGEP 186 + + + + E L +D+++T L + T + ++ +K E Sbjct: 121 ISFVMDDCSRLREKLHDGLLDIVITLEPKLDDPNLVVELFSTERLVFIGGRDHSFEKIED 180 Query: 187 IP---LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMM 243 ++ + R L L K +I + S++ A++ +V GLGV+ P + Sbjct: 181 AGEECMIFSGEHCALRRFFLRFLEKREIKPKHHLEFSSMEAIKQSVANGLGVSLMPYISV 240 Query: 244 SP 245 Sbjct: 241 EA 242 >UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepID=A9W9P6_CHLAA Length = 301 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 70/286 (24%), Positives = 114/286 (39%), Gaps = 12/286 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L LR F AVA + AAA + Q A+S+Q+ +LE+ +G LF R GR+ LTE Sbjct: 1 MELRHLRYFEAVARHSHVTRAAAELHIAQPALSKQISQLERELGITLFDRVGRSLRLTEA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LL YAR IL +EA +++ G +TIGA +LP LL YP + Sbjct: 61 GEALLPYARAILAQVEEARAAMAERIGLKAGRVTIGAPPTVGAHLLPPLLTIFHQRYPGI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHR--PSAFKALNLRTSPTHWYCAAEYILQKGEP 186 L + + ++LE+ DL V L P + + L + Sbjct: 121 TLRLHEAGIQSLLDLLEAGITDLAVVALPVTDEQLTVTPLLNEPLVLIVSTTHPLARRSE 180 Query: 187 I--------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + +L R+ L +A + + V AGLGV+ Sbjct: 181 VMMTELRHERWILSPSSYELREATLKACREAGFTPQTVLEGGETETLVRFVAAGLGVSLV 240 Query: 239 PVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 P ++ V+ L + L+ + + A+ + + + Sbjct: 241 PALAVAGCTDVVRLTVSDQHLTRSLGLVWRSDRTASPAARALREFL 286 >UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67NJ1_SYMTH Length = 311 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 67/301 (22%), Positives = 112/301 (37%), Gaps = 16/301 (5%) Query: 1 MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR 60 M R ++ L L TF V + +F AA + TQ +V++Q+ LE + +LF R Sbjct: 1 MRGPTRRGSSMLLQHLTTFCRVVEEGSFTRAAQVLNLTQPSVTKQVGALEDYLQVQLFTR 60 Query: 61 HGRNKLLTEHGIQLLGYARKILRFNDEACSSLM--FSNLQGVLTIGASDESADTILPFLL 118 G+ LT G + YAR+++ ++ S G +T+G LP LL Sbjct: 61 QGKRVHLTPVGELVYDYARQVIHLVQRCEEAVREYRSPGSGSVTVGCVHTIGLFTLPELL 120 Query: 119 NRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRP--SAFKALNLRTSPTHWYCA 176 +P++ ++V+ N ML EVD+ + T + + L P Sbjct: 121 AAYVREHPRVKINVKTGNNRETVTMLLHGEVDVGLVTTPQVHERIEVVPLFEDPLVVVAG 180 Query: 177 AEYILQ--------KGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAA 228 + +P + + FR L + I + A++ Sbjct: 181 PSFAADLPPVVSNADLAQLPFIGYVRGARFRMTTDQVLEEMGIQPQFVMEFDNHEAIKTM 240 Query: 229 VKAGLGVTARPVEMMSPDLR----VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 V G G+ PV + +L V V GLP L T L+ +E + + Sbjct: 241 VALGFGIALEPVSAVQRELISGQLVRLNVPGLPRLSRTTSLILRRGERRSEAVRAFLSLL 300 Query: 285 E 285 E Sbjct: 301 E 301 >UniRef50_B1Y5W5 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=B1Y5W5_LEPCP Length = 316 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 69/308 (22%), Positives = 122/308 (39%), Gaps = 25/308 (8%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + + LR F VA +F AA A+ T AV+ Q++ LE + LF R GR L Sbjct: 1 MKTVTFRQLRVFTEVARHLSFVRAAEALHLTPPAVTMQVKELESAIELPLFDREGRKVSL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLM--FSNLQGVLTIGASDESADTILPFLLNRVSSVY 125 T G L YA+++L EA ++ GVL++G A +P LL R + Sbjct: 61 TTAGEYFLVYAKRLLSTLKEADDAMARFRKVESGVLSVGMVGT-AKYFVPQLLARFRIEH 119 Query: 126 PKLALDVRVK-RNAYMAEMLESQEVDLMVTTHRPS--AFKALNLRTSPTHWYCAAEYI-- 180 P + L ++V + +L+ EVDL + P A +A P + + Sbjct: 120 PGIELKLQVGANREQLVALLQQGEVDLAIMGRPPREMATRAEPFAAHPHVFIAPPGHPVL 179 Query: 181 ------LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLG 234 L + PL+ + S R ++ + + R+A + ++ AV AG+G Sbjct: 180 AQGRTTLSELASYPLIAREPASGTRALMDRFFQEHRVELRIAMEMPSNETIKQAVMAGMG 239 Query: 235 VTARPVEMMSPDLR---VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIY--------QA 283 ++ + + +LR + P+ T ++ + A+ + Sbjct: 240 LSFLSLHTIGLELRCGLLELVHVENAPIVRTWNIVHMQSRLLSPAAEALRYFMLEHGEAH 299 Query: 284 MESYHNPW 291 + + PW Sbjct: 300 LAEHDRPW 307 >UniRef50_A0L4T1 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=A0L4T1_MAGSM Length = 307 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 15/256 (5%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 ++ LR F AVA +F AA + TQ AV+ Q+++LE+ LF RH LT Sbjct: 1 MSFSDTRLRVFYAVAKHLSFTRAAEELYLTQPAVTFQIRQLEEHFDTRLFDRHHNRISLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYP 126 E G+++ YA +IL E ++ +GV+ +GAS + +LP +L+ + Sbjct: 61 EAGLEVYSYAERILDLYRETEKAVSELTGVTRGVVKVGASTTIGEYLLPRILSDYRDQFN 120 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSA---------FKALNLRTSPTHWYC-A 176 + + + + + LE +D+ + L + P H C Sbjct: 121 DVQIRLSIDNTRTVVRKLEDATIDVGMIEGPVKNKNIARDGCLDDELVVILPPNHPLCDL 180 Query: 177 AEYILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPW---RLAYVASTLPAVRAAVKAGL 233 E +++ + P V ++ S R +V L A +P+ + + AV+ +V+ G+ Sbjct: 181 DEIPVKELKAYPFVSREEGSGTRQVVHDHLLHAGLPYDQLDIVLELGSTEAVKGSVEGGI 240 Query: 234 GVTARPVEMMSPDLRV 249 G+ + +L++ Sbjct: 241 GIGIVSSASLIKELKL 256 >UniRef50_B2JU37 Transcriptional regulator, LysR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JU37_BURP8 Length = 314 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 69/308 (22%), Positives = 129/308 (41%), Gaps = 12/308 (3%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L LR F AVA+ +F AAA + QS V+ +++ LE + ++LF R +LT Sbjct: 1 MELRHLRMFCAVAEFGSFTAAAEKIHNVQSNVTMRIKELEGELNQQLFIRQKNGVMLTSA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF-SNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LGYA++IL+ DE+ ++L+ ++ +G+L +G+ + +A LP +L + + YP++ Sbjct: 61 GQIFLGYAQRILQLTDESRNALLDNASPRGLLRLGSMETTAAIRLPKVLAKYHARYPQVQ 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTT--HRPSAFKALNLRTSPTHWYC-----AAEYILQ 182 L + A + + +E +D H+ ++ + + + + Sbjct: 121 LSLMTGTTAELIKAVECHRLDGAFVGGFHQNASLHQEEVFQEELVLVSGIEFESVDALAS 180 Query: 183 KGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEM 242 + ++ +R + +A I TL + + V AG+GVT P + Sbjct: 181 RMSAQTVLAFRTGCFYRSTLEHWFFQAGIIPGQVMELGTLDGIMSCVAAGMGVTLLPRSV 240 Query: 243 MSP-DLRVLSGVDGLPP-LPDTEYLLCYDPSS--NNELAQVIYQAMESYHNPWQYSPMSA 298 + R LPP +L + S A + A + P A Sbjct: 241 VEGHGTRQAVHCHALPPEFSHVTTVLIRNKDSIVTPAFAALTDLAHAQFAIDADIRPARA 300 Query: 299 PEGDDSLL 306 S L Sbjct: 301 ENMLASRL 308 >UniRef50_P0ACQ6 Hydrogen peroxide-inducible genes activator n=273 Tax=cellular organisms RepID=OXYR_ECO57 Length = 305 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 74/300 (24%), Positives = 127/300 (42%), Gaps = 21/300 (7%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +++ L VA+A+ F AA + +Q +S Q+++LE +G L R R L T+ Sbjct: 1 MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQA 60 Query: 71 GIQLLGYARKILRFNDEA--CSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G+ L+ AR +LR +S + G L IG +LP ++ + +PKL Sbjct: 61 GMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKL 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMV--TTHRPSAFKALNLRTSPTHWYCAAEYILQKGEP 186 + + + + L+S ++D ++ AF + L P ++ E Sbjct: 121 EMYLHEAQTHQLLAQLDSGKLDCVILALVKESEAFIEVPLFDEPMLLAIYEDHPWANREC 180 Query: 187 IP--------LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 +P L++L+D RD + +A + A++L +R V AG G+T Sbjct: 181 VPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGITLL 240 Query: 239 PVEMMSPDLRVLSGVDGLP---PLPDTEYLLCYDPSSN-----NELAQVIYQAMESYHNP 290 P + P+ R GV LP P P L Y P S +LA+ I M+ + + Sbjct: 241 PALAVPPE-RKRDGVVYLPCIKPEPRRTIGLVYRPGSPLRSRYEQLAEAIRARMDGHFDK 299 >UniRef50_Q130S5 Transcriptional regulator, LysR family n=1 Tax=Rhodopseudomonas palustris BisB5 RepID=Q130S5_RHOPS Length = 319 Score = 216 bits (552), Expect = 6e-55, Method: Composition-based stats. Identities = 79/296 (26%), Positives = 133/296 (44%), Gaps = 12/296 (4%) Query: 1 MISANRPII---NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKEL 57 M RP + + L+ LR FV+VA+ F A + R+QSA++Q ++RLE+++ L Sbjct: 1 MGRERRPALGDRRITLEHLRAFVSVAEGGGFQQAGLELHRSQSAITQSLKRLEEIIECRL 60 Query: 58 FAR-HGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPF 116 R G LT G + L A +IL +EA S+++ + G +T+G D+ L Sbjct: 61 VERCQGHIVGLTSDGRRFLPSAVEILARTNEAVSAMVQPQISGRITLGVPDDFRIMDLHG 120 Query: 117 LLNRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKA------LNLRTSP 170 ++R +++ L ++ ++ + ++ ++DL + A L LRT P Sbjct: 121 AISRCAALNRGLRIETVSALSSTLVSGVQKGDLDLAIFKQIDGQRPATAGRSSLLLRTEP 180 Query: 171 THWYCAAEYILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVK 230 W A +PLV+ +R+ L L P AYV+++ VRAA+ Sbjct: 181 LMWVANARSRFDSIAELPLVVFPPGCCYREAALVALAAKAKPSYPAYVSASYENVRAAIS 240 Query: 231 AGLGVTARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 AGLGV P + D VL DG P LP + +S + + + + Sbjct: 241 AGLGVGILPDSAVGADHIVLREADGFPRLPRVNLTMI--EASGRKAVRQFRDFLRA 294 >UniRef50_C6D4H5 Transcriptional regulator, LysR family n=4 Tax=Bacillales RepID=C6D4H5_PAESJ Length = 303 Score = 216 bits (552), Expect = 6e-55, Method: Composition-based stats. Identities = 68/272 (25%), Positives = 129/272 (47%), Gaps = 19/272 (6%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 + L+ L F VA+ +F+AAA ++ TQ AV+ Q+Q LE G +L R + LT Sbjct: 1 MALNFHQLHIFYTVAERGSFSAAAQSLHMTQPAVTMQVQSLEDYFGTKLLQRSTKRIDLT 60 Query: 69 EHGIQLLGYARK---ILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVY 125 E G L+ YAR+ ++R D+A S+ L+G L +GAS + ILP LL + Sbjct: 61 EAGKALMPYARRSIELIRDTDQAMSAFT-KQLKGRLQLGASLTIGEYILPRLLGPFGQTF 119 Query: 126 PKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPS--AFKALNLRTSPTHWYCAAEYILQK 183 P++++ ++V A + E + + ++ + + + + + ++ L K Sbjct: 120 PEISISMKVMNTAQIIEEIINHQLTFGLIEAPVNHPDMQMEAVMSDELKLIVPKDHPLSK 179 Query: 184 GEPI--------PLVLLDDPSPFRDMVLATLNKADIPW---RLAYVASTLPAVRAAVKAG 232 + + P V+ + S R ++ L + I ++ + AV++AV+AG Sbjct: 180 RQKVLLDEVADYPFVVREQGSGTRLVMEEQLKRKKIDPADLKIVMELGSTGAVKSAVEAG 239 Query: 233 LGVTARPVEMMSPDLRVLSGVDGLPPLPDTEY 264 LGV+ + ++ + G+ + P+ DT + Sbjct: 240 LGVSFVSESSVKHEVAL--GLLHVIPIEDTRF 269 >UniRef50_Q4ZVH5 Regulatory protein, LysR:LysR, substrate-binding n=5 Tax=Pseudomonas syringae group RepID=Q4ZVH5_PSEU2 Length = 284 Score = 216 bits (552), Expect = 6e-55, Method: Composition-based stats. Identities = 77/282 (27%), Positives = 143/282 (50%), Gaps = 6/282 (2%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD++L+RTF AVA + F+AAA + ++ +AVS +QRLE + G L R + LT Sbjct: 5 LDIELVRTFHAVARIGKFSAAAEQLHKSPAAVSVHIQRLEAVAGGRLLNRDNQAVSLTAL 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LL ++L +D + L ++L G +T+G DE A ++ +L ++ +P + L Sbjct: 65 GKRLLLSTTELLSTHDRVLADLQGTHLAGRITLGVPDEYAVHVIRDILPVFAAAWPNVVL 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAF--KALNLRTSPTHWYCAAEYILQKGEPIP 188 +++ + + E + ++ V A L ++ W A L +P+P Sbjct: 125 EMKSAPSYALREQVARGKLQTAVIAQPKGQLSADAQFLVSTKPVWVGPASVALASADPVP 184 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L + P+R+ +LA+L R+ + + A++A V+AGL ++ ++ ++ Sbjct: 185 LAVHAAQCPYREAMLASLKDNGRKIRVVLESPSNQAIKACVEAGLAISLIDRSGVTQAMQ 244 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSS-NNELAQVIYQAMESYHN 289 +L D LP +P+ E + PSS N+E ++ QA++ Y Sbjct: 245 IL---DDLPEIPEHEIVFLRSPSSQNDEAVSLLAQALQKYFR 283 >UniRef50_A6VV39 Transcriptional regulator, LysR family n=6 Tax=Gammaproteobacteria RepID=A6VV39_MARMS Length = 295 Score = 216 bits (552), Expect = 6e-55, Method: Composition-based stats. Identities = 62/289 (21%), Positives = 118/289 (40%), Gaps = 13/289 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D+ LR F+A+A +F AA + Q AVS +++LE +G L R RN LT+ Sbjct: 1 MDIKPLRYFIAIAKTESFTKAAQQLGVAQPAVSMAIKKLEADLGLTLIHRADRNIGLTDE 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G +LL +A KI++ D+A + QG + +G P +L YP + Sbjct: 61 GKKLLIHAEKIIQATDDALLEMSELKGLSQGEVRVGIPSMLGSYYFPPILMAFRHKYPTI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHR--PSAFKALNLRTSPTHWYCAAEYILQKGEP 186 L V + +MLE+ E+DL V P + L A ++ + E Sbjct: 121 TLKVIEGGTWQLQKMLENGELDLSVIVAETLPDGLETQALIREEMLVTIATDHPFSQLEK 180 Query: 187 IP--------LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 I LV+ + R +V ++ + + +P +++ + G G++ Sbjct: 181 ISPEAFFDEELVMFKEGYFHRRIVDKLAKACKKTPKIGFETNLIPLIKSITQQGFGISTL 240 Query: 239 PVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 ++ D +++ PP+ + S ++ + + + + Sbjct: 241 LAMVIEEDDDLITRSFD-PPIWLDLGIAWRKDSYLSKANRAFLEFVNEH 288 >UniRef50_B4EHW5 LysR family regulatory protein n=20 Tax=Proteobacteria RepID=B4EHW5_BURCJ Length = 285 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 79/282 (28%), Positives = 130/282 (46%), Gaps = 5/282 (1%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + LD++ ++ FV ADL +F AA + TQSAVS +++RLE +G+ L R R L Sbjct: 1 MKTLDIEAVQAFVLTADLKSFTRAAEVLDTTQSAVSLKIKRLEDGLGRRLLERTPRQVRL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 + G L AR+++ + A S+ S Q L IG S LP LL R+S P Sbjct: 61 SADGTAFLEPARELVAAHHGAISAFGTS--QRRLVIGVSHHVVGADLPMLLRRMSEAEPA 118 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPS-AFKALNLRTSPTHWYCAAEYILQKGEP 186 L L++RV + + + + ++D V S + + W AA++ + +P Sbjct: 119 LVLEIRVAASRDVLDAFDRGQLDAAVALQHDSRRLDGETILSESFGWMAAADFEYRPPQP 178 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 + L +P R M + L++A + W +V + + AAV AGL V A + Sbjct: 179 LRLATQAEPCSVRRMAVDALDQAGVAWTEVFVGGGVATIGAAVSAGLAVAALGHRVAPAG 238 Query: 247 LRVLSGVDGLPPLPDTEYLLCYD--PSSNNELAQVIYQAMES 286 + GLPPLP + +L + + + + A+ S Sbjct: 239 TVDVGMRYGLPPLPTRDVVLYSSLTDARARQALRTLGAALRS 280 >UniRef50_B8G0Z2 Transcriptional regulator, LysR family n=4 Tax=Firmicutes RepID=B8G0Z2_DESHD Length = 303 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 67/275 (24%), Positives = 119/275 (43%), Gaps = 18/275 (6%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + ++ L F VA+ +F+ AA + +Q AVS ++ LE G +L R ++ LT Sbjct: 1 MIIETLEIFRKVAEEKSFSKAAEDLFLSQPAVSSHIRNLENEFGTKLIYRSSKHVDLTPA 60 Query: 71 GIQLLGYARKILRFNDEACSSLM--FSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L A +I+ EA + S + G L IGAS + ILP L+++ + YP L Sbjct: 61 GEILYEQACRIINQYQEAKEKINQIQSIVSGNLRIGASFTIGEYILPELVSQTARRYPNL 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTH---------RPSAFKALNLRTSPTHWYCA-AE 178 ++V + +A+ L +D+ + P + L P+H Sbjct: 121 NINVTIGNTEEIAQGLRQNRLDVALVEGKITGKEFILEPFMVDEMVLIALPSHPLAKIKG 180 Query: 179 YILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 Q E +L + S R+ + IP + +Y S+ V+AAV +GLG+ Sbjct: 181 VTAQDLEDQVWILRETGSGTREFSDRFIETLKIPVKHSYGFSSNTGVKAAVLSGLGIALV 240 Query: 239 PVEMMSPDLR-----VLSGVDGLPPLPDTEYLLCY 268 ++ +++ ++ + LP L E+L+ Sbjct: 241 SKLIIQKEIKAGEIAIIPLEENLPRL-SREFLIAR 274 >UniRef50_A4G228 Transcriptional regulatory protein, LysR family n=18 Tax=Betaproteobacteria RepID=A4G228_HERAR Length = 367 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 65/292 (22%), Positives = 116/292 (39%), Gaps = 18/292 (6%) Query: 6 RPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNK 65 + N L L+ F VA L +F+ AA + TQ AVS Q+++LE G LF + G+ Sbjct: 43 HTVKNATLRQLKVFETVARLLSFSRAAEELHLTQPAVSTQVKKLEDHAGLALFEQLGKKI 102 Query: 66 LLTEHGIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSS 123 LT G +LL Y+R I++ EA ++ G L + + D P LL + Sbjct: 103 YLTPGGTELLHYSRTIIQQFQEAEDAMTQFKGITGGKLNVAVI-SAGDYFFPRLLVEFAR 161 Query: 124 VYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKAL--NLRTSPTHWYCAAEYIL 181 + + L++ V + L + DL + P+ + P A ++ L Sbjct: 162 SHQGVTLNLSVHNREGLLNQLANNLTDLAIMVRPPTDMDTINEPFAPHPYVIVAAPDHHL 221 Query: 182 QKGEPI--------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGL 233 + I P V+ + S + +A + ++ AV AG+ Sbjct: 222 VSKKNIPMSTLIHEPFVVREKGSDTWHSMEDGFGSRIDDLNIAMEIKSTETIKQAVIAGM 281 Query: 234 GVTARPVEMMSPDLRV----LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIY 281 G++ +S +L+ + V+G P + + Y++ +AQ Sbjct: 282 GISFLSAHTISMELQAGSLTVLDVEGFPVMLN-WYVVHRKNKRLPPVAQAFR 332 >UniRef50_C3BMM7 Putative uncharacterized protein n=3 Tax=Bacillus RepID=C3BMM7_9BACI Length = 298 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 67/291 (23%), Positives = 116/291 (39%), Gaps = 19/291 (6%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 + L++ L TF A+ F A + QS+V+ Q++ LE +G LF R G+ LT Sbjct: 1 MILEIKQLITFKTAAENLNFTQTAKKLNFAQSSVTAQIKALETELGTPLFERLGKRLFLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFS-NLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 E G + YA K++ + EA +L + G L IGA + LP +L + +P+ Sbjct: 61 EAGRKFQLYADKMIALSHEAKMALKGDEEISGTLVIGAQESQCTYRLPSILKEFKTQFPQ 120 Query: 128 LALDVRVKRN-AYMAEMLESQEVDLMVTTHRPSAFKALN---LRTSPTHWYCAAEYILQK 183 + L + + + E L ++DL A AL+ L + L + Sbjct: 121 IKLIFKPAHSNEDVKEKLMEGKLDLAFILDECKAEDALHVESLVREKLKIVVFPNHPLLE 180 Query: 184 G--------EPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGV 235 E L+L + +R + D+ ++ A++ V AGLG+ Sbjct: 181 KSIISTKDFESETLLLTELGCSYRTIFEELFRAEDVYPVNKIEFVSVEAIKQCVIAGLGI 240 Query: 236 TARPVEMMSPD-----LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIY 281 P ++ D ++ L + + P+ T+ D L Q I Sbjct: 241 AILPAMVVEKDIQQGTMKELVLENTISPI-FTQIAWHKDKWITAPLQQFIE 290 >UniRef50_Q1K251 Transcriptional regulator, LysR family n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K251_DESAC Length = 283 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 124/283 (43%), Gaps = 12/283 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++++ L+ F+AVA + + AA + QS V+ ++++LE+ G+ LF R + LT Sbjct: 1 MEINELKIFLAVARQGSISRAAEELNYVQSNVTTRIKQLEERFGRPLFHRKSKGVCLTAS 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNL-QGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G+ L YA++I++ EA +L + + QG L I + + +A LP LL YP++A Sbjct: 61 GLILCDYAQRIIQLTGEAHDALSENAVPQGPLAISSMETTAAVRLPSLLADYHRRYPQVA 120 Query: 130 LDVRVKRNAYMAEMLESQEVD--LMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 L++ +A + L +VD + P A ++ + + E + Sbjct: 121 LNLVSAPSAESLKKLLDYQVDGAFIAGEVDPQAIESCEVFEEELVLVAPLDIDPLTMESL 180 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 +++ +R + L + + ++ + A V AG+G++ P ++ Sbjct: 181 KILVFRPGCSYRARLENWLRQNGRLGYHSVELGSIEGILACVAAGMGISILPRSVVERPH 240 Query: 248 RVLSGVDGLPPLPD------TEYLLCYDPSSNNELAQVIYQAM 284 L L LP+ T ++ + L QV + + Sbjct: 241 --LMQNCALHELPEPVRRMTTRFVWRRHEKPSTAL-QVFRELL 280 >UniRef50_Q67PU0 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67PU0_SYMTH Length = 299 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 71/296 (23%), Positives = 120/296 (40%), Gaps = 17/296 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + L L TF V + FA A A V +Q AV++Q+ LE +G L R GR LT Sbjct: 1 MLLQHLITFCRVVETGGFARAGALVGLSQPAVTRQVAALEAELGTPLLDRSGRQIHLTPA 60 Query: 71 GIQLLGYARKILRFNDEACSSLM--FSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G + AR+I+ + + +G + IGA +LP +L +P + Sbjct: 61 GRLVYERARRIITAVNTLKEEVADLAHPERGRIAIGAVTTVGLRLLPPILAAFKREHPGI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPS--AFKALNLRTSPTHWYCAAEYILQKGEP 186 + V+ R + L E++L + + +++ L P CA + +P Sbjct: 121 RVHVKADRTQETIQRLLEGEIELAILPTPVTHPRLRSVPLVEDPVVLVCAPGRRSELPDP 180 Query: 187 IP--------LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 +P L+ PS FR V A L +A + + + AV V+AG G Sbjct: 181 LPLAKLGEIDLISFQAPSRFRTFVDAMLEQAGVYPNVTMEFDSHEAVTLMVEAGFGCALV 240 Query: 239 PVEMMSPDL----RVLSGVDGLPPLPDTEYLLCYDPSSN-NELAQVIYQAMESYHN 289 P + +L V V+G+P + T L P+ + + ++Q + + Sbjct: 241 PASAVERELALGTVVRVEVEGMPRMARTTSLAFRHPNPGWSPATERLFQMIVDFFR 296 >UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=Geobacter RepID=B5EGJ2_GEOBB Length = 300 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 61/290 (21%), Positives = 114/290 (39%), Gaps = 15/290 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D+ LR F+ VA + F AA A+ Q AVS +++LEQ + LF R + LT Sbjct: 1 MDVRQLRYFIEVAKVKNFTKAAEALHIAQPAVSMAVKKLEQELELSLFNRQDKKVSLTAE 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L +A++IL A + +G + +G + P ++ YP+L Sbjct: 61 GEIFLPHAKRILDDLRAAELEMAELKGLSKGEVRLGIPPMISAYFFPDIIRDFKKSYPQL 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHR--PSAFKALNLRTSPTHWYCAAEYILQKGEP 186 L V + + +M+ E+D+ V P + ++ + + Sbjct: 121 HLSVLGEGAWRIQKMIGQGELDMGVVAGGNFPETLEVRRFLREEIVICVPPDHPFAQRKS 180 Query: 187 I--------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + PLV + R+ L L A + + + V++ V+ G G++ Sbjct: 181 VSLVEFIREPLVFYKEGYYIREFFLEVLKGAGSAPNIVFETNLFSLVKSLVRNGTGISIF 240 Query: 239 PVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELA-QVIYQAMESY 287 +++ D L V PPL + L+ + + LA + + + Sbjct: 241 LRMVVAADT-DLVAVPFDPPL-HLDLLIAWKKDTYLSLANRAFVDFLLQH 288 >UniRef50_A0LNI4 Transcriptional regulator, LysR family n=4 Tax=Deltaproteobacteria RepID=A0LNI4_SYNFM Length = 302 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 70/253 (27%), Positives = 109/253 (43%), Gaps = 15/253 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D+ L F V ++ +F AA AVC TQ VS+ ++ LE+ +G++L R GR L T Sbjct: 1 MDIHRLVVFCRVLEMGSFTKAAEAVCLTQPTVSEHVRALEETLGEKLIDRLGREVLPTPA 60 Query: 71 GIQLLGYARKILRFNDEACSSLM--FSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L YAR I++ DEA +L NL G L IGAS +LP L+ YP + Sbjct: 61 GKILYQYARDIIQLRDEAVQALEKFKGNLSGALLIGASTIPGTYVLPELIGSFKKSYPAI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAF---------KALNLRTSPTH-WYCAAE 178 + +R+ +A + V+ V R L L H W Sbjct: 121 QITLRITDSAEVVARTIDGGVEFGVIGARLEDRRIVLEEAFSDELVLAVFRDHPWAVRKS 180 Query: 179 YILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPW---RLAYVASTLPAVRAAVKAGLGV 235 L++ P +L + S R ++ L + + A+R +KAG+G+ Sbjct: 181 VSLEELAGEPFILRERGSGTRIVMNQALEAHGFSPTKLNIVAEMGSTEAIRQGIKAGIGI 240 Query: 236 TARPVEMMSPDLR 248 + ++ DLR Sbjct: 241 SILSHRAVAEDLR 253 >UniRef50_C6WIS4 Transcriptional regulator, LysR family n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WIS4_ACTMD Length = 298 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 75/297 (25%), Positives = 127/297 (42%), Gaps = 7/297 (2%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +LDL+ LRT VA+A+ F AAA +Q A+SQ ++ LE+ + ++LF R GRN T Sbjct: 4 SLDLEHLRTLVAIAECGGFGKAAAVRHISQPALSQHVRLLERGLKRKLFERDGRNMRFTH 63 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G ++L AR+I+ +D + L + + +G+++ SA +LP ++ + +P + Sbjct: 64 EGERVLAEARRIIEVHDASLRRLEARPER-TIVVGSTEHSAGQVLPEMIRALREAFPDCS 122 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGE-PIP 188 + R+ +AE + VD + P WY A + P Sbjct: 123 TRFEIGRSTQLAESVHKGAVDFAFVLDPGGQGPGHLVGRLPLVWYAARGWQPDGASGTWP 182 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 LV ++P R+ L+ L ++ ++TL V A V+AGLGV P P + Sbjct: 183 LVAFEEPCGLRERALSVLTGEGHQVQVTAQSTTLEGVLAGVRAGLGVALLPNAGSRP--Q 240 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQA---MESYHNPWQYSPMSAPEGD 302 L LP T + + + + A + Q P +A Sbjct: 241 GLVVCSDLPEAGTTHLRMVSRRGLDAGVERAALSAGVEFFAQRPHLQLVPGAAAAQG 297 >UniRef50_C8W3M6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W3M6_DESAS Length = 293 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 64/249 (25%), Positives = 109/249 (43%), Gaps = 14/249 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +++ L+ FV VA ++F AA + QS+++ Q+ LE + +LF R GR LT++ Sbjct: 1 MEIRQLKAFVTVAKQHSFTRAAELLDYAQSSITAQVSALENKLNTKLFERLGRQVTLTQN 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNL-QGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL YA KIL+ N EA + S + +G L++GA + S LP LL ++P + Sbjct: 61 GEKLLPYAEKILKLNSEAIELVSSSPVPRGSLSVGAMETSCIYRLPKLLQEYRKLFPNVD 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRP---SAFKALNLRTSPTHWYCAAEYILQKGEP 186 L + + L+ ++D+ T + + L P AA + L K P Sbjct: 121 LTLVNGYPEELIHSLKENKIDVAFFTGQEITNPDLVSETLLDEPIVLVSAAGHPLSKKAP 180 Query: 187 IPLVLLDD--------PSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + + LD +R + I + + + V GLG+T Sbjct: 181 V--ITLDLQGETIVLCSCCYRATLRKIFENKGIQVGSILKFANIEVRKRCVINGLGITIL 238 Query: 239 PVEMMSPDL 247 P + +L Sbjct: 239 PRVTVEAEL 247 >UniRef50_Q7P1J5 Probable transcriptional activator n=1 Tax=Chromobacterium violaceum RepID=Q7P1J5_CHRVO Length = 287 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 74/265 (27%), Positives = 122/265 (46%), Gaps = 3/265 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 ++D LLR AVA + AAA + +Q A+S Q+++LE+ G+ L R R LT Sbjct: 4 DIDTGLLRALAAVARHGSINRAAAELGHSQPALSLQLRKLERHCGQTLLQRSTRGVTLTP 63 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LL YA +I+ ++ + + +G ++ LP +L ++ P L Sbjct: 64 AGQALLPYAERIVCLAEQMLPGAPAAAAR-SCRVGLIEDVVSRHLPRVLADFAAARPGLK 122 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSP-THWYCAAEYILQKGEPIP 188 L+ RV ++ E+DL++ R + + + AA + + +P Sbjct: 123 LEARVAPGRELSAAYRRGELDLLIANPRLCGLEQAPAWSMECALPWLAAGGVCPDEDELP 182 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 LVL P +RD +L L A R+ + +S+L AV+AA++AGLGV A ++ + LR Sbjct: 183 LVLFAAPCSWRDAMLQALQLAGRRHRVVFESSSLLAVQAALEAGLGVGALLPDVANDALR 242 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSN 273 L LP LP L + Sbjct: 243 PLPPGC-LPALPPVPLALYRHAGRD 266 >UniRef50_B7KTE5 Transcriptional regulator, LysR family n=8 Tax=Rhizobiales RepID=B7KTE5_METC4 Length = 295 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 85/281 (30%), Positives = 140/281 (49%), Gaps = 4/281 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 NLDLDL+RTFV + + TFA AA V RT SA+S Q++RLE+ +G+ LF R R + T Sbjct: 8 NLDLDLIRTFVTICEAGTFARAAERVGRTPSAISLQVKRLEERLGRALFLRQPRAVVPTA 67 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LLG R++L NDE + ++G + GA +S LP +L R ++ +P++ Sbjct: 68 DGEALLGLGRRLLALNDEVVTFFDAPPMEGRVRFGAPHDSGLFALPAMLRRFAATHPQVE 127 Query: 130 LDVRVKRNAYMAEMLESQEVDLMV-TTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 +DVR+ + + E + +DL++ H PS A + + W + + P+P Sbjct: 128 VDVRLDASRLLVEAIADGALDLVLFAGHLPSDRAAQVVHSEDLVWVGLRGGLAEARRPLP 187 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L L +R L L++A I +R+AY + AAV+A L V P+ + P + Sbjct: 188 LALCQSGCTWRAAALDALDQAGIAYRVAYTSEHCQGQIAAVEADLAVAPLPLSVARPPFQ 247 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 ++ LP L + L+ + + +S+ + Sbjct: 248 RIA---ALPWLGSYDVLMRLRDGAGPAARALAGHVADSFRD 285 >UniRef50_A6DK62 Hydrogen peroxide-inducible genes activator n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DK62_9BACT Length = 293 Score = 213 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 69/291 (23%), Positives = 122/291 (41%), Gaps = 15/291 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + L F +A F A+ +Q A+S Q++++E +G LF R R +L+ Sbjct: 1 MTFKDLEYFAILAKEKHFGQASVQAGVSQPALSIQIKKMEAELGVCLFERSNRQVVLSPE 60 Query: 71 GIQLLGYARKILRFND--EACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LL A+KILR + + C+ QG L +GA A + P +++ + YP++ Sbjct: 61 GEVLLERAQKILRQVEDFQTCARQFKDPYQGQLILGAFPTLAPYLFPQIIDELHQSYPEM 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVT--THRPSAFKALNLRTSPTHWYCAAEYI------ 180 ++ ++ + +ML+ +VD H S + + + + A Y Sbjct: 121 KFFIKEEKTETLLKMLKEGKVDAAFIALPHEDSTLDSEFIFSEEFLFATPANYPEDFPNE 180 Query: 181 --LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 LQ + L+LLD+ FRD L + + AS+L +R V AGLGVT Sbjct: 181 LSLQSLKGRELMLLDEGHCFRDQALELCSVNQARENFDFRASSLETLRHMVAAGLGVTLI 240 Query: 239 PVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 P ++ + P P E L + + A++ + + + Sbjct: 241 PKCAQDESAKI-KYMKFSDPSPKREIALFWR--KTSPKAEIFREIADDLRD 288 >UniRef50_A0KPQ5 Transcriptional regulator n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KPQ5_AERHH Length = 307 Score = 213 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 84/306 (27%), Positives = 131/306 (42%), Gaps = 17/306 (5%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +N +R FVAVAD + + AAA + +QSAV+ ++ LE +G LF R+ R LT Sbjct: 1 MNFTFRQIRYFVAVADSFSVSRAAAELHISQSAVTSAIRELETELGAALFERNPRGVSLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLM--FSNLQGVLTIGASDESADTILPFLLNRVSSVYP 126 G Q L +AR+IL EA SL QG LTIG + A L L R +P Sbjct: 61 TQGHQFLLHARRILGAMTEAGQSLKAVAQQDQGRLTIGVTTLVAGYYLSEALGRFRRAFP 120 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLMVT----THRPSAFKALNLRTSPTHWYCAAEYILQ 182 + ++V+ Y+ + + EVD+ + T R AF L SP + AA + L Sbjct: 121 AVQIEVKEDEQPYLEHQIVNGEVDVGILMTNRTIRQEAFDTELLTRSPLRVWLAANHPLC 180 Query: 183 KGEPIPL-VLLDDP--SPFRDMVLAT----LNKADIPWRLAYVASTLPAVRAAVKAGLGV 235 + L L ++P S D + L + I R+ +++ AVR+ V + LG+ Sbjct: 181 AESTLSLKALGEEPMISLTADQLDQIIGGGLRRYGIAPRIVLRTASVEAVRSLVASQLGL 240 Query: 236 TARPVEMMSP---DLRVLSGVDGLPPLPDTEYLLCYDPSSNNE-LAQVIYQAMESYHNPW 291 P P + + P+P + L + S E A+ + Sbjct: 241 ALLPDFAYRPWSLEQERVEARAIKEPIPAIDIGLVWRRGSRLEWTAREFIDIVRDQSRLR 300 Query: 292 QYSPMS 297 P++ Sbjct: 301 ARQPLA 306 >UniRef50_A3YHF1 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YHF1_9GAMM Length = 288 Score = 213 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 137/276 (49%), Gaps = 5/276 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDLDLLRTFVA+ AA V R+Q AVS Q++RLE++ GK+L R ++ LT+ Sbjct: 5 LDLDLLRTFVAIVKTGQLKLAAETVSRSQGAVSMQLKRLEEVTGKQLLIRSNQDLKLTQA 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 GI+LL Y+ ++L N +A +L + LT G + A + + + S P L Sbjct: 65 GIKLLSYSEQLLSLNYQAVKALTVKEEKSHLTFGIPSDYAQDFIRHFMPLLKSELPLLDA 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 V + + + + S+E+D+ + T + A +L P W + L+ E IPL Sbjct: 125 KVICDSSRNLRKRVNSEEIDIAIVTGEGAKTSASSLWIEPLIWAAPHGFDLKADEEIPLA 184 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 + +D+ ++ ++ ++ ++ + L + AA +AGLG+ PV +++ + Sbjct: 185 SFEQDCMIKDIAKQSMKESKRVFKTSFESPVLENLVAAAEAGLGIALLPVSLVNEN---- 240 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 + L L T+ ++ + + LA + Q++ S Sbjct: 241 -RLQSLETLSLTQKVISTEIIHSTNLASELVQSISS 275 >UniRef50_D1VDU1 Transcriptional regulator, LysR family n=2 Tax=Actinomycetales RepID=D1VDU1_9ACTO Length = 291 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 79/278 (28%), Positives = 125/278 (44%), Gaps = 3/278 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD+ LR+ ++AD F AA ++ +QSAVSQ ++RLEQ+ G+ L R G T Sbjct: 5 LDIVALRSLTSIADSGGFRRAADSLHLSQSAVSQHIRRLEQVCGRPLVRRGGNRAQFTPE 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L+ ARKIL +D+A L ++ L IGA++ +AD +LP + R+ + +P ++ Sbjct: 65 GELLVAEARKILAAHDDALGRLQAADSGRTLVIGATEHAADLLLPSITARLRTSFPDCSV 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGE-PIPL 189 R+ R + + L+ +D + P WY A + L +G IPL Sbjct: 125 RFRIDRGKQLNDRLDEGALDASLFMGDVRGRDVSPAGALPLAWYAAPGWHLPEGRGDIPL 184 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 V +D+P R L L + + A L V A +AGLGV +P+ Sbjct: 185 VAIDEPCTIRRRALKVLGDSGQAGSVVCEAGHLAGVLHAARAGLGVALLAHLGTAPE--G 242 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 L LPP+ + + L + +A Sbjct: 243 LEQRHDLPPVEPEPLHVRGRRGAPAALVTAVAEAASGL 280 >UniRef50_A0LJJ0 Transcriptional regulator, LysR family n=2 Tax=Bacteria RepID=A0LJJ0_SYNFM Length = 308 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 68/303 (22%), Positives = 123/303 (40%), Gaps = 15/303 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L+TF VA+L +F AA + QS++S Q+Q LE+ +G +LF R G+ LTE Sbjct: 1 MELRQLKTFRVVANLLSFNKAAGQLHYAQSSISAQIQILEEELGVQLFDRLGKRVQLTEA 60 Query: 71 GIQLLGYARKILRFNDEACSSL-MFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G++LL YA KIL DE S + + G LTI + LP +L S +P++ Sbjct: 61 GVRLLQYANKILDLVDETNSMVNRVNEPTGSLTIRIPETLGVRRLPAVLREFHSRFPRVR 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHR---PSAFKALNLRTSPTHWYCAAEYILQKGEP 186 L+ + + L DL + L P A ++ L Sbjct: 121 LNFITCALEGLDKDLRKGITDLAFLLAESINAADLDMATLGFEPVVLVAAPDHPLAAKRK 180 Query: 187 I--------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + ++L +R ++ L + ++ + S++ ++ V AG+G++ Sbjct: 181 VHTRDLTGSTILLSRVDCSYRKVLEQILEQEEVTRFNRFEFSSVEVIKHCVMAGVGISVL 240 Query: 239 PVEMMSPDL---RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSP 295 P ++ D+ R++ + ++ Y + Q + P Sbjct: 241 PSIAVAEDVARKRMVVLPWSEGGIQVAVLMVWYRERWISPTLQAFMDVTKKVFAQAAEKP 300 Query: 296 MSA 298 A Sbjct: 301 SRA 303 >UniRef50_D2B3J0 Transcriptional activator n=4 Tax=Actinomycetales RepID=D2B3J0_STRRD Length = 282 Score = 213 bits (542), Expect = 8e-54, Method: Composition-based stats. Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 4/279 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +L+ LLR+FV + + AA A+ TQ A+SQQ+++LE+ VG L R T Sbjct: 6 DLETALLRSFVTAVRAGSISRAAVALGHTQPALSQQLRKLERAVGSPLLHRAPSGVSPTR 65 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL YA +IL + +A + L G +G ++ A + LP L ++ ++P Sbjct: 66 AGEELLPYAERILALSAQALAE-TGRALTGRCGVGLLEDLAVSRLPQALADLARLHPDAT 124 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 L+V N M E ++ V L++ + P W + + +P+P+ Sbjct: 125 LEVLSLSNGAMREAYDTGRVQLVLDEVPDLPWPPRWTVRLPLVWAVG-QGVAVDADPLPV 183 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 VL + +R VL TL A WR+A+ +++L V AA++AGLGV A + P + Sbjct: 184 VLFSNTCAWRTSVLETLEGAGRRWRVAFESNSLAGVLAALRAGLGVAALMPANLEPAM-A 242 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSN-NELAQVIYQAMESY 287 LP LPD E L P + + L + A+ Sbjct: 243 CHDAAALPALPDVELGLARHPGTEGDALVDAVETALRRM 281 >UniRef50_A5D2L1 Transcriptional regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D2L1_PELTS Length = 303 Score = 213 bits (542), Expect = 9e-54, Method: Composition-based stats. Identities = 62/254 (24%), Positives = 117/254 (46%), Gaps = 15/254 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L F+ VA+L +F AA + +Q AVS Q++ LE+ + LF R + +LTE Sbjct: 1 MNLKQLEAFLLVAELQSFTKAARQLYMSQPAVSFQIKALEEDLQVALFQRGDKKVILTEA 60 Query: 71 GIQLLGYARKILRFNDEACSSL--MFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L A+++L+ + L + +G L +GAS + +LP L+ + YP + Sbjct: 61 GRLLYPEAKQMLKHYQKIKVGLDDLRDLKKGHLVVGASTIPGEYLLPLLIGKFKEKYPGI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTH---------RPSAFKALNLRTSPTHWYCAAEY 179 + ++V + + + + +E+DL +T RP L L +P+H + + Sbjct: 121 KITLKVSGSGQVGQWVREREIDLGITGAFIEGESLECRPWIDDQLVLIVNPSHRWASLGA 180 Query: 180 I-LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWR---LAYVASTLPAVRAAVKAGLGV 235 + + + P+++ + S R + L + ++ + AV AV+AGLGV Sbjct: 181 VQASELKNEPMIMREHDSGTRRTIEKKLKECNLSLEKIPQGMELGSTRAVITAVEAGLGV 240 Query: 236 TARPVEMMSPDLRV 249 + L + Sbjct: 241 SIVSRYAAREALEL 254 >UniRef50_A1VNR0 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=A1VNR0_POLNA Length = 305 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 67/292 (22%), Positives = 114/292 (39%), Gaps = 18/292 (6%) Query: 12 DLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHG 71 L ++TFV VA + + AA + TQ AVS Q+++LE G L GRN LT G Sbjct: 7 TLKQMQTFVEVARQRSVSKAAERLFVTQPAVSMQIRQLEDAFGLPLIEPLGRNIQLTHAG 66 Query: 72 IQLLGYARKILRFND--EACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 LG+A L EA + +G + + A +P LL R ++P + Sbjct: 67 EAFLGHAIAALGQFKDLEALMAEHVGMKKGRIDLAVVST-AKYFVPMLLVRFRKLHPGID 125 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAF--KALNLRTSPTHWYCAAEYILQKGEPI 187 + +R+ + M+ E DL+V P +A T+P A ++ L + + + Sbjct: 126 IQLRIDNRENILGMMARYEADLVVMGRAPGNLDCEATPFATNPLSIVAAPDHALVRRKTL 185 Query: 188 P--------LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARP 239 P V+ + S R + P + + ++ AV AG+G++ Sbjct: 186 PFSALGEHGFVVREQGSGTRAAMERLFADQKTPLNVVMEMPSNETIKQAVMAGMGLSFLS 245 Query: 240 VEMMSPDLR----VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 M +L L ++G P L Y+ + A + + Sbjct: 246 RRTMRHELAHGYIALVDIEGTP-LVGNWYITHLSQKKLSPAALAFKEFLVEQ 296 >UniRef50_Q7W6A4 Putative LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W6A4_BORPA Length = 310 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 72/308 (23%), Positives = 137/308 (44%), Gaps = 12/308 (3%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +++ L TF+ VA L +F AAA + TQ+A+S ++ LE +G+ LF R R+ LT Sbjct: 1 MNIRFLETFIWVAQLRSFKAAAGKLHLTQAAISGRIAALENDLGELLFERGSRDTRLTPA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSN-LQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LL YA+++L + +L S L+G + +G + T + R+S +P+L Sbjct: 61 GRTLLDYAQRMLDTDHAMRQALRGSGTLRGRVRLGVVESIVHTWFTPFIRRLSQTHPELE 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHR--PSAFKALNLRTSPTHWYCAA------EYIL 181 +++ + + ++L+ +D+ + T + ++ W C+ + + Sbjct: 121 IELTAESTRRLQDLLKHGSIDVALQTDPIVGDDVRNRDMGMLKMGWICSPAAGIPAQASV 180 Query: 182 QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVE 241 + PLV S +L L+ A + + S++ A ++AGLG P+ Sbjct: 181 AELATHPLVTFPRHSQPHLQLLDVLDAAGVQAGRIHFVSSIAACTQFIEAGLGAATLPLA 240 Query: 242 MMSPDLR--VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQ-AMESYHNPWQYSPMSA 298 + P L V P LP + + P LA+ + + A++ Q++ + Sbjct: 241 AVRPGLAAGRYRQVCCTPDLPHLRLVASWRPDRVAGLAEAVVRLALDEMRLYAQHNDDAL 300 Query: 299 PEGDDSLL 306 P D +L Sbjct: 301 PPLDSGVL 308 >UniRef50_Q1IRM1 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRM1_ACIBL Length = 302 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 126/296 (42%), Gaps = 20/296 (6%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D D L TF+ VA L F+ A V R+QSAVS Q+++LEQ G+ LF R G+ L+ Sbjct: 1 MDFDQLLTFLEVAKLGNFSRAGEKVYRSQSAVSAQIRQLEQEYGERLFDRSGKIVRLSPA 60 Query: 71 GIQLLGYARKILRFNDEACSSL--MFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LL YA++++ +E+ ++ +GVL+IGA++ + +LP + +P++ Sbjct: 61 GEVLLEYAQRMVALRNESLRAVADQGETPRGVLSIGANEATCLYVLPDIFTEYCQQFPQV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRP--SAFKALNLRTSPTHWYCAAEYILQKGEP 186 + V + + + +E +DL + T + K + + L E Sbjct: 121 QITVYRNFSRKILQAVEDGVIDLGIATLPVKSPSLKVHPIFRDRLELMVPVRHPLAAKES 180 Query: 187 IPLV-------LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARP 239 + + + R + + R+A ++ +++ V +G+GVT Sbjct: 181 VTIEEIAEYPQIFPKTGYTRQQLDKLFRPYNSKLRVAMEIPSVGLIKSFVVSGVGVTLLS 240 Query: 240 VEMMSPDLRVLSGVDGLPPLPDTEY-----LLCYDPSSNNELAQVIYQAMESYHNP 290 ++R +G + P+ + L+ + + A M H P Sbjct: 241 STFAQDEVR--AGKAKMLPIAGVDMWRELGLIYRNDRTLPRSATAFIDLMR--HRP 292 >UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Bacillales RepID=C6IV95_9BACL Length = 305 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 96/246 (39%), Gaps = 13/246 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L+ FV VA AA + QSAVS+Q+ +LEQ +G LF + GRN LT Sbjct: 1 MELRQLQYFVKVARKEHVTQAAEELHVAQSAVSRQIHQLEQELGVNLFMQKGRNLHLTAV 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G IL+ D A S + QG + +G + ++P ++ +YP + Sbjct: 61 GQLFCSRVEMILKDLDRAVSEVHEFLDPEQGEIRLGFPNSLGIHMIPSVVAEFRKLYPNV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKAL---NLRTSPTHWYCAAEYILQ--- 182 R + + S EVDL + P + + T + L Sbjct: 121 KFRFRQGTYPTLIRDVVSGEVDLAFISPFPENHDQVTGNVVLTEDLVAILPPGHPLAGEQ 180 Query: 183 -----KGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA 237 + + +L R +V +A ++A+ +R V AG+GV+ Sbjct: 181 SIKLSQLKDEKFILFSKGYSLRPIVWHACLEAGFTPKIAFEGEETDTIRGLVAAGMGVSL 240 Query: 238 RPVEMM 243 P + Sbjct: 241 LPEMAL 246 >UniRef50_A5FXI2 Transcriptional regulator, LysR family n=22 Tax=Bacteria RepID=A5FXI2_ACICJ Length = 304 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 80/265 (30%), Positives = 129/265 (48%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 + LLR+F+AV + +F AA + QS VSQ + RLE L G+ L AR T Sbjct: 15 RFEPVLLRSFIAVVEARSFTRAARHLGLRQSTVSQHVARLEALAGRRLIARDTHRVSPTP 74 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LL +AR++L + S L+G + IGAS++ + LP +L + +P++ Sbjct: 75 DGDALLDFARRLLEAEARIDAYFAASALRGRIRIGASEDFVFSALPEVLADFAGRHPEVD 134 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 L++ V + + ++ E+DL+ R + W G+P+PL Sbjct: 135 LELTVGLSQTLYAGFDAGELDLIFAKRRAGDRRGRVAWAEELVWIARPGKRPVAGQPVPL 194 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 VL PS R+ L +++A +PWR+A + +L +RAA AGLG A ++ P L Sbjct: 195 VLYPPPSVTRERALEAMDRAHLPWRIACSSGSLSGLRAAALAGLGFAAHAARLIPPGLAP 254 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNN 274 + GLPPL TE+++ + Sbjct: 255 VPPDAGLPPLGLTEFVVIGPEGRHP 279 >UniRef50_A3JF22 Putative LysR-family transcriptional regulator n=1 Tax=Marinobacter sp. ELB17 RepID=A3JF22_9ALTE Length = 294 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 72/289 (24%), Positives = 132/289 (45%), Gaps = 21/289 (7%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +++ L TF ++ L +F AAA + +Q A+S ++ LE +G ELF R GRN +LT Sbjct: 1 MNIKALETFFWISKLGSFRAAAKKLYASQPAISARISGLEDELGIELFDRSGRNVVLTSK 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSN-LQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G Q L Y KIL+ + E ++ S+ ++G + +GA++ A T LP L+ R++ YP + Sbjct: 61 GRQALFYTEKILQLHAELLEAVASSDTIKGSIRLGAAETIAYTWLPELIERINETYPAIN 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHR--PSAFKALNLRTSPTHWYCAAEYILQK---- 183 L++ + + +AE L +E+D+ F P W + + L Sbjct: 121 LELDIDISVNLAEKLIKREIDIAFLIGEVKQEGFFCTPFYNYPLIWVVSPKLTLPPEPVS 180 Query: 184 ---GEPIPLVLLD---DPSP-FRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 +P++ +P R +V N A I + +S+L + G+GV+ Sbjct: 181 LFDLAKLPIITYPRMSEPHVNIRALVNEMSNSAQI-----HSSSSLSTIIRMALDGIGVS 235 Query: 237 ARPVEMMSPDLRV--LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQA 283 A P E++ +L L +P+ + + Y + + + + Sbjct: 236 ALPKEIIKRELASGQLREFQVEASIPNLIFNMAYCAAPGANVVRAVADL 284 >UniRef50_A2SKW7 Transcriptional regulator, LysR family n=24 Tax=Burkholderiales RepID=A2SKW7_METPP Length = 342 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 74/304 (24%), Positives = 122/304 (40%), Gaps = 20/304 (6%) Query: 5 NRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRN 64 + P+ N L F AVA L + + AA + TQ AVS Q+ LE G L R R Sbjct: 2 SNPLRNATFRQLAAFNAVARLGSVSRAADEMHLTQPAVSIQLGILEDAAGTPLLRRSARG 61 Query: 65 KLLTEHGIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVS 122 LTE G L GYA +IL EA ++ ++ G+L IGA A+ +LP LL Sbjct: 62 VKLTEAGELLAGYASRILDLWGEAGDAMAAHCGDIAGLLRIGAVTT-AEYLLPPLLLEFV 120 Query: 123 SVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKAL--NLRTSPTHWYCAAEYI 180 +P++ + +++ A + L Q++DL + P+ K + P + A + Sbjct: 121 REHPQVKVKLQIGNRADVVNQLAGQDIDLAIMGRPPAELKTISAAFAKHPMAFVAAPSHP 180 Query: 181 --------LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAG 232 L L++ + S R V A + + S+ A++ AG Sbjct: 181 LMTTPKPGLAALNQANLLVRERGSGTRTTVEQLFKDAGVSLTIGSEMSSNEAIKQMCAAG 240 Query: 233 LGVTARPVEMMSPDLRVLSGVDGLPPLPDT-----EYLLCYDPSSNNELAQVIYQAMESY 287 GV + +L +G+ + P+PD +++ A Q + + Sbjct: 241 FGVAFLSLHSCVLELE--TGMLAILPMPDCPIERDWHVMHLAGRPVPAAAAAFEQFLRVH 298 Query: 288 HNPW 291 W Sbjct: 299 GQAW 302 >UniRef50_C7QKA9 Transcriptional regulator, LysR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QKA9_CATAD Length = 299 Score = 209 bits (534), Expect = 7e-53, Method: Composition-based stats. Identities = 68/287 (23%), Positives = 115/287 (40%), Gaps = 13/287 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++ L TF VA + +F AAA + QS+V+ Q++ LE + ELF R G LT+ Sbjct: 1 MEFQQLVTFQRVATVLSFTRAAADLNYAQSSVTNQIRNLEASLQTELFDRLGSKIQLTDA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFS-NLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL +A ++L DEA + + G LTIG + LP LL YP + Sbjct: 61 GQRLLLHAERLLALADEARADVAGPAEPSGTLTIGTMESITSYRLPPLLELFHYRYPAVH 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKAL---NLRTSPTHWYCAAEYIL----- 181 L +R A L D+ + L L A + L Sbjct: 121 LALRPSLCADTCRALRQGTFDVGFLMEPDTGHAGLDSVVLSKERLVLVAAPSFPLASAPT 180 Query: 182 ---QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + +P++ + +RD+ L + T+ A++ V AGLGV+ Sbjct: 181 VTIEALRKVPVLATESGCSYRDLFEIELTAEQLTPASFLEFGTIEAIKRGVIAGLGVSLL 240 Query: 239 PVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 P ++ ++ + LP P E ++ L++ + ++ Sbjct: 241 PEITVADEIAS-GSLTVLPWTPPFEVVIQLAWRRGKRLSRELQLFID 286 >UniRef50_Q1LN85 Transcriptional regulator, LysR family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LN85_RALME Length = 307 Score = 209 bits (534), Expect = 8e-53, Method: Composition-based stats. Identities = 69/295 (23%), Positives = 122/295 (41%), Gaps = 18/295 (6%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 + + LR VA ++ AA A+ T AVS Q++ E+ VG LF R GR LT Sbjct: 1 MQITFRQLRVVSEVARYSSVIRAAEALHLTAPAVSLQIKEAERQVGLTLFDRAGRRMTLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYP 126 G L YAR++L +A + G LTIG +A LP LL + + +P Sbjct: 61 TTGEYFLVYARRLLATLKDAEDMMARFKRLESGRLTIGMV-GAASYFLPQLLAKFHAEHP 119 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAF--KALNLRTSPTHWYCAAEYILQKG 184 + + +R+ + M++ +VDL + P +A + P + ++ + Sbjct: 120 AVDVRLRLASREKLGVMMQGNDVDLCIMGRPPQDPPTRAEPFASHPHVLVVSPQHRFARA 179 Query: 185 EPI--------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 E + P ++ + S R+ + L+ I + A++ AV AG+GV+ Sbjct: 180 EAVPAVALANEPFIVREPDSGTREALQKYLDAHRIQPTFVMEMPSNEAIKQAVMAGMGVS 239 Query: 237 ARPVEMM----SPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 + + S L + V+GLP L ++ + A+ + + Sbjct: 240 LLSLHTIALEWSNGLIAVPHVEGLP-LERRWNVVNIAAKQLSPAAEAFRYFVLEH 293 >UniRef50_Q1N6N4 Transcriptional regulator, LysR family protein n=1 Tax=Bermanella marisrubri RepID=Q1N6N4_9GAMM Length = 300 Score = 209 bits (534), Expect = 8e-53, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 23/258 (8%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D L+ F+AVA+ +F+ AA + TQ AVS+++ LE + +LF R R LT Sbjct: 1 MDTQSLQAFIAVAETESFSQAAHRLHLTQPAVSKRIAMLEDTLDCQLFDRLPRKATLTPA 60 Query: 71 GIQLLGYARKILRFNDEACSSLM--FSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L+ A+ I+ E + L ++ G L IG S LP +L + S YP++ Sbjct: 61 GEALMPKAKHIVSELLEIKTELASLSGDVSGTLRIGTSHHIGLHHLPHILRKFHSTYPQV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTT---HRPSAFKALNLRTSPTHWYCAAEYILQKGE 185 L ++ + E L + E+D+ T + + P + C+ + L K + Sbjct: 121 KLAMQFLGSEAACEALANGELDIAFATLPLEQDPKLDMQAIWRDPLTFVCSHTHPLSKQK 180 Query: 186 PIPL--------VLLDDPSPFRDMVLATLNKADIPWR----------LAYVASTLPAVRA 227 I L +L + + +++ A K + + ++ ++S + ++ Sbjct: 181 NIHLKDLTQHEAILPEPNTVTFEIIEAAFKKEKLSLQAALPSRYRETISMMSSYMETIKM 240 Query: 228 AVKAGLGVTARPVEMMSP 245 GLG P M Sbjct: 241 MASVGLGWAVLPDHMAQD 258 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C5BE75 HTH-type transcriptional regulator PecT n=26 Tax... 317 4e-85 UniRef50_C0QAW4 HTH-type transcriptional regulator (LysR family ... 313 4e-84 UniRef50_P52662 HTH-type transcriptional regulator pecT n=151 Ta... 310 4e-83 UniRef50_B9K1U5 Transcriptional regulator LysR family n=59 Tax=A... 303 6e-81 UniRef50_Q07TP5 Transcriptional regulator, LysR family n=10 Tax=... 302 1e-80 UniRef50_C8X2B4 Transcriptional regulator, LysR family n=1 Tax=D... 301 2e-80 UniRef50_Q4K8T2 Transcriptional regulator, LysR family n=16 Tax=... 300 5e-80 UniRef50_C1DFD4 Transcriptional regulator, LysR family n=4 Tax=P... 297 4e-79 UniRef50_A6FDC4 Putative uncharacterized protein n=1 Tax=Moritel... 297 4e-79 UniRef50_C7C7Z1 Transcriptional regulator, LysR family n=4 Tax=A... 295 2e-78 UniRef50_B1LTB4 Transcriptional regulator, LysR family n=4 Tax=A... 294 4e-78 UniRef50_A0NUY3 Transcriptional regulator n=1 Tax=Labrenzia aggr... 292 1e-77 UniRef50_B0FL86 Putative LysR family transcriptional regulator n... 291 2e-77 UniRef50_Q1R159 Transcriptional regulator, LysR family n=3 Tax=P... 290 5e-77 UniRef50_Q2SFI4 Transcriptional regulator n=1 Tax=Hahella chejue... 289 1e-76 UniRef50_Q4ZQB6 Regulatory protein, LysR:LysR, substrate-binding... 288 1e-76 UniRef50_Q0G3C9 Transcriptional regulator, LysR family protein n... 287 2e-76 UniRef50_A3JCT6 Transcriptional regulator, LysR family protein n... 285 1e-75 UniRef50_Q390C5 Transcriptional regulator, LysR family n=7 Tax=B... 284 3e-75 UniRef50_Q07MM7 Transcriptional regulator, LysR family n=1 Tax=R... 283 4e-75 UniRef50_C6BGY1 Transcriptional regulator, LysR family n=2 Tax=R... 282 8e-75 UniRef50_B9JGF1 Transcriptional regulator protein n=57 Tax=Rhizo... 282 1e-74 UniRef50_A9BYU9 Transcriptional regulator, LysR family n=22 Tax=... 282 1e-74 UniRef50_B6R8G3 Transcriptional regulator n=2 Tax=Rhodobacterace... 282 1e-74 UniRef50_Q98HR2 Transcriptional regulator n=1 Tax=Mesorhizobium ... 282 1e-74 UniRef50_A3YDA6 Transcriptional regulatory protein n=1 Tax=Marin... 281 2e-74 UniRef50_B3QIV6 Transcriptional regulator, LysR family n=4 Tax=R... 281 3e-74 UniRef50_A3YH31 Transcriptional regulator, LysR family protein n... 280 4e-74 UniRef50_B7L193 Transcriptional regulator, LysR family n=3 Tax=R... 279 7e-74 UniRef50_A3Y8R3 Putative uncharacterized protein n=1 Tax=Marinom... 279 9e-74 UniRef50_Q7W0I5 Probable LysR-family transcriptional regulator n... 279 1e-73 UniRef50_P16931 HTH-type transcriptional regulator dgdR n=16 Tax... 278 1e-73 UniRef50_C6BUP0 Transcriptional regulator, LysR family n=1 Tax=D... 277 3e-73 UniRef50_A9WT18 Transcriptional regulator, LysR family n=8 Tax=A... 276 5e-73 UniRef50_C5BWR0 Transcriptional regulator, LysR family n=1 Tax=B... 276 9e-73 UniRef50_C5B683 Transcriptional regulator, LysR family n=6 Tax=M... 275 1e-72 UniRef50_B1J9W8 Transcriptional regulator, LysR family n=38 Tax=... 275 2e-72 UniRef50_Q1QUX8 Transcriptional regulator, LysR family n=1 Tax=C... 274 4e-72 UniRef50_B2IEY6 Transcriptional regulator, LysR family n=1 Tax=B... 274 4e-72 UniRef50_Q1YP17 Transcriptional regulator, LysR family protein n... 273 5e-72 UniRef50_B1YYS6 Transcriptional regulator, LysR family n=41 Tax=... 273 6e-72 UniRef50_B8H5P5 Transcriptional regulator, LysR family protein n... 273 7e-72 UniRef50_A3VR51 Probable transcriptional regulator n=1 Tax=Parvu... 273 7e-72 UniRef50_UPI000197C29B LysR family transcriptional regulator n=1... 272 7e-72 UniRef50_C0Z518 Transcriptional regulator n=3 Tax=Paenibacillace... 272 1e-71 UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=C... 271 2e-71 UniRef50_Q0FXE0 Probable transcriptional regulator n=1 Tax=Fulvi... 271 2e-71 UniRef50_Q13P59 Transcriptional regulator, LysR family n=8 Tax=P... 271 2e-71 UniRef50_B2Q7A1 Putative uncharacterized protein n=1 Tax=Provide... 271 2e-71 UniRef50_A6UCU7 Transcriptional regulator, LysR family n=12 Tax=... 271 2e-71 UniRef50_C1SL97 Transcriptional regulator, COG0583 n=1 Tax=Denit... 270 5e-71 UniRef50_UPI0001AEBA54 LysR family transcriptional regulator n=1... 270 6e-71 UniRef50_A1WQD6 Transcriptional regulator, LysR family n=12 Tax=... 269 9e-71 UniRef50_Q28WA0 Transcriptional regulator, LysR family n=1 Tax=J... 268 2e-70 UniRef50_A6WG79 Transcriptional regulator, LysR family n=2 Tax=A... 267 3e-70 UniRef50_C6IVL6 Transcriptional regulator YwqM n=1 Tax=Paenibaci... 267 3e-70 UniRef50_A8LQJ4 HTH-type transcriptional regulator n=5 Tax=Rhodo... 267 4e-70 UniRef50_A3YEV8 Putative uncharacterized protein n=1 Tax=Marinom... 267 5e-70 UniRef50_C3BJ72 YwqM (Probable transcriptional regulator YwqM) n... 266 7e-70 UniRef50_Q7WCR5 Probable LysR-family transcriptional regulator n... 266 8e-70 UniRef50_C3KKD9 Putative LysR family transcriptional regulator n... 266 8e-70 UniRef50_C5A914 Regulatory protein n=2 Tax=Burkholderia RepID=C5... 265 1e-69 UniRef50_A9DC03 Transcriptional regulator, LysR family protein n... 265 1e-69 UniRef50_B2JVD1 Transcriptional regulator, LysR family n=1 Tax=B... 265 2e-69 UniRef50_B1LS77 Transcriptional regulator, LysR family n=2 Tax=P... 264 2e-69 UniRef50_A5ED63 Transcriptional regulator, LysR family n=1 Tax=B... 264 3e-69 UniRef50_A0NRR7 Transcriptional regulator, LysR family protein n... 263 4e-69 UniRef50_A1B7H3 Transcriptional regulator, LysR family n=1 Tax=P... 263 4e-69 UniRef50_A9IU06 Transcriptional regulator, LysR-family n=23 Tax=... 263 5e-69 UniRef50_A4XSC8 Transcriptional regulator, LysR family n=7 Tax=P... 263 6e-69 UniRef50_A1WVW1 Transcriptional regulator, LysR family n=11 Tax=... 263 6e-69 UniRef50_Q2C715 Transcriptional regulator n=2 Tax=Photobacterium... 262 8e-69 UniRef50_B1KPF3 Transcriptional regulator, LysR family n=2 Tax=G... 262 8e-69 UniRef50_B9Y467 Putative uncharacterized protein n=1 Tax=Holdema... 262 9e-69 UniRef50_B9JHY5 Transcriptional regulator protein n=2 Tax=Agroba... 262 1e-68 UniRef50_A0NXC5 Transcriptional regulator, LysR family protein n... 262 1e-68 UniRef50_C5CZ98 Transcriptional regulator, LysR family n=6 Tax=P... 262 1e-68 UniRef50_Q65FY0 Probable transcriptional regulator YwqM n=1 Tax=... 262 1e-68 UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepI... 262 1e-68 UniRef50_Q7W0V6 Putative lysR-family transcriptional regulator n... 262 1e-68 UniRef50_B7GI02 Transcriptional regulator, LysR family n=2 Tax=B... 261 2e-68 UniRef50_Q0B2N7 Transcriptional regulator, LysR family n=9 Tax=B... 261 2e-68 UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=P... 261 2e-68 UniRef50_A4YNE0 Putative transriptional regulatory protein, LysR... 261 3e-68 UniRef50_Q317K8 Transcriptional regulator, LysR family n=1 Tax=D... 261 3e-68 UniRef50_UPI00016C47B2 transcriptional regulator, LysR family pr... 261 3e-68 UniRef50_A4J1K6 Transcriptional regulator, LysR family n=1 Tax=D... 261 3e-68 UniRef50_Q2BIB7 Probable transcription regulator protein n=1 Tax... 261 3e-68 UniRef50_A6LQS5 Transcriptional regulator, LysR family n=5 Tax=C... 260 5e-68 UniRef50_P96725 Uncharacterized HTH-type transcriptional regulat... 259 1e-67 UniRef50_A6W298 Transcriptional regulator, LysR family n=2 Tax=P... 259 1e-67 UniRef50_Q0K9T5 Transcriptional regulator, LysR family n=2 Tax=B... 259 1e-67 UniRef50_C3AM26 YwqM (Probable transcriptional regulator YwqM) n... 258 2e-67 UniRef50_Q13JW6 Transcriptional regulator, LysR family n=5 Tax=P... 258 2e-67 UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Ba... 258 2e-67 UniRef50_B5WKB1 Transcriptional regulator, LysR family n=4 Tax=P... 257 3e-67 UniRef50_B8DKN9 Transcriptional regulator, LysR family n=4 Tax=P... 257 3e-67 UniRef50_C3BMM7 Putative uncharacterized protein n=3 Tax=Bacillu... 257 3e-67 UniRef50_Q3JTX1 Transcriptional regulator, LysR family n=37 Tax=... 257 5e-67 UniRef50_UPI0001745DD5 transcriptional regulator, LysR family pr... 257 5e-67 UniRef50_A9GYT7 Transcriptional regulator n=4 Tax=Rhodobacterace... 257 5e-67 UniRef50_Q167A0 Transcriptional regulator, LysR family, putative... 256 6e-67 UniRef50_Q5QVA7 Transcriptional regulator, LysR family n=2 Tax=I... 256 7e-67 UniRef50_A5IA94 Transcriptional regulator, LysR family n=6 Tax=B... 256 8e-67 UniRef50_B2II45 Transcriptional regulator, LysR family n=1 Tax=B... 256 1e-66 UniRef50_C5CP23 Transcriptional regulator, LysR family n=4 Tax=P... 256 1e-66 UniRef50_A6VRV6 Transcriptional regulator, LysR family n=1 Tax=M... 256 1e-66 UniRef50_B4EPV1 LysR family regulatory protein n=7 Tax=Burkholde... 255 1e-66 UniRef50_C1DJQ4 LysR family transcriptional regulator protein n=... 255 1e-66 UniRef50_A1WMH7 Transcriptional regulator, LysR family n=1 Tax=V... 255 1e-66 UniRef50_A8ILZ3 Transcriptional regulator n=2 Tax=Xanthobacterac... 255 1e-66 UniRef50_A0RKW5 Transcriptional regulator, LysR family n=81 Tax=... 255 1e-66 UniRef50_Q3IFV7 Putative bacterial regulatory protein LysR Famil... 255 1e-66 UniRef50_B2JU37 Transcriptional regulator, LysR family n=1 Tax=B... 255 1e-66 UniRef50_Q393B8 Transcriptional regulator, LysR family n=2 Tax=P... 255 2e-66 UniRef50_Q2RHB2 Transcriptional regulator, LysR family n=1 Tax=M... 255 2e-66 UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax... 255 2e-66 UniRef50_C6CWT6 Transcriptional regulator, LysR family n=5 Tax=B... 254 2e-66 UniRef50_B5ZG57 Transcriptional regulator, LysR family n=2 Tax=G... 254 2e-66 UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Sy... 254 2e-66 UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=G... 254 2e-66 UniRef50_Q5FRD9 Transcriptional regulator, LysR family n=1 Tax=G... 254 3e-66 UniRef50_C7I0K1 Transcriptional regulator, LysR family n=1 Tax=T... 254 3e-66 UniRef50_C0ZGB6 Transcriptional regulator n=1 Tax=Brevibacillus ... 254 4e-66 UniRef50_B9JX79 Transcriptional regulator LysR family n=1 Tax=Ag... 254 4e-66 UniRef50_A4TW42 LysR-family transcriptional regulator n=1 Tax=Ma... 253 5e-66 UniRef50_Q1ZUY1 Transcriptional regulator n=3 Tax=Vibrionaceae R... 253 5e-66 UniRef50_Q13GF3 Transcriptional regulator, LysR family n=1 Tax=B... 253 6e-66 UniRef50_Q1QTI0 Transcriptional regulator, LysR family n=3 Tax=P... 253 6e-66 UniRef50_A9BWM0 Transcriptional regulator, LysR family n=6 Tax=P... 252 9e-66 UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=... 252 1e-65 UniRef50_A9WIA6 LysR substrate-binding n=4 Tax=Chloroflexaceae R... 251 2e-65 UniRef50_A4G228 Transcriptional regulatory protein, LysR family ... 251 2e-65 UniRef50_C4X8P7 NADH dehydrogenase transcriptional regulator n=9... 251 2e-65 UniRef50_Q141J0 Transcriptional regulator, LysR family n=7 Tax=B... 251 2e-65 UniRef50_A0L4T1 Transcriptional regulator, LysR family n=2 Tax=P... 251 2e-65 UniRef50_Q1IRZ3 Transcriptional regulator, LysR family n=1 Tax=C... 251 3e-65 UniRef50_B1Y5W5 Transcriptional regulator, LysR family n=2 Tax=B... 251 3e-65 UniRef50_D2C3C2 Transcriptional regulator, LysR family n=1 Tax=D... 251 3e-65 UniRef50_B9R5T3 LysR substrate binding domain protein n=1 Tax=La... 251 3e-65 UniRef50_A8TVM4 Transcriptional regulator, LysR family protein n... 251 3e-65 UniRef50_P20668 HTH-type transcriptional regulator gltC n=17 Tax... 251 3e-65 UniRef50_B7KZZ4 Transcriptional regulator, LysR family n=11 Tax=... 251 4e-65 UniRef50_B9Z2V3 Transcriptional regulator, LysR family n=1 Tax=L... 250 4e-65 UniRef50_B8G0Z2 Transcriptional regulator, LysR family n=4 Tax=F... 250 4e-65 UniRef50_A6UJN8 Transcriptional regulator, LysR family n=5 Tax=A... 250 5e-65 UniRef50_Q3J596 Transcriptional regulator, LysR family n=37 Tax=... 250 5e-65 UniRef50_A9WGB3 LysR substrate-binding n=2 Tax=Chloroflexus RepI... 250 5e-65 UniRef50_Q5X4A2 Hydrogen peroxide-inducible genes activator n=4 ... 249 6e-65 UniRef50_Q0BQ99 Transcriptional regulators, LysR family n=1 Tax=... 249 9e-65 UniRef50_A4WYH8 Transcriptional regulator n=11 Tax=Alphaproteoba... 249 1e-64 UniRef50_C0CUF5 Putative uncharacterized protein n=1 Tax=Clostri... 249 1e-64 UniRef50_Q48I21 Transcriptional regulator, LysR family n=4 Tax=P... 249 1e-64 UniRef50_A6VV39 Transcriptional regulator, LysR family n=6 Tax=G... 249 1e-64 UniRef50_C8W3M6 Transcriptional regulator, LysR family n=1 Tax=D... 249 1e-64 UniRef50_A1VNR0 Transcriptional regulator, LysR family n=2 Tax=C... 248 2e-64 UniRef50_C6D4H5 Transcriptional regulator, LysR family n=4 Tax=B... 248 2e-64 UniRef50_B9ITM1 Transcriptional regulator, LysR family n=71 Tax=... 248 2e-64 UniRef50_A3JDH1 Probable transcriptional regulator n=1 Tax=Marin... 248 2e-64 UniRef50_Q1K251 Transcriptional regulator, LysR family n=1 Tax=D... 248 2e-64 UniRef50_Q67SW7 LysR family transcriptional regulator n=1 Tax=Sy... 247 3e-64 UniRef50_A0LJJ0 Transcriptional regulator, LysR family n=2 Tax=B... 247 3e-64 UniRef50_D1RXQ6 Transcriptional regulatory protein n=1 Tax=Serra... 247 3e-64 UniRef50_B0UBR3 Transcriptional regulator, LysR family n=1 Tax=M... 247 4e-64 UniRef50_A4A328 Transcriptional regulator, lysr family protein n... 247 4e-64 UniRef50_C5CN69 Transcriptional regulator, LysR family n=1 Tax=V... 247 5e-64 UniRef50_A8RPQ8 Putative uncharacterized protein n=2 Tax=Clostri... 247 5e-64 UniRef50_UPI0001B5968A HTH-type transcriptional regulator pecT n... 246 6e-64 UniRef50_A1B0T7 Transcriptional regulator, LysR family n=1 Tax=P... 246 6e-64 UniRef50_Q11NC7 Transcriptional regulator, LysR family n=3 Tax=P... 246 7e-64 UniRef50_Q1LFN3 Transcriptional regulator, LysR family n=15 Tax=... 246 8e-64 UniRef50_A1S908 Putative LysR-family transcriptional regulator n... 245 1e-63 UniRef50_D0KYG7 Transcriptional regulator, LysR family n=3 Tax=G... 245 1e-63 UniRef50_P42722 HTH-type transcriptional regulator cfxR n=9 Tax=... 244 3e-63 UniRef50_A4XTW7 Transcriptional regulator, LysR family n=1 Tax=P... 244 3e-63 UniRef50_B4E8W5 LysR family regulatory protein n=25 Tax=Burkhold... 244 3e-63 UniRef50_A0KR40 Transcriptional regulator n=5 Tax=Gammaproteobac... 244 4e-63 UniRef50_C0ZCK2 Transcriptional regulator n=1 Tax=Brevibacillus ... 243 5e-63 UniRef50_C1F961 Transcriptional regulator, LysR family n=1 Tax=A... 243 5e-63 UniRef50_A8G7X5 Transcriptional regulator, LysR family n=1 Tax=S... 243 6e-63 UniRef50_Q2J7C4 Transcriptional regulator, LysR family n=22 Tax=... 243 7e-63 UniRef50_D0IY48 Transcriptional regulator, LysR family n=22 Tax=... 243 7e-63 UniRef50_Q1IRM1 Transcriptional regulator, LysR family n=1 Tax=C... 242 8e-63 UniRef50_B2IKY9 Transcriptional regulator, LysR family n=1 Tax=B... 242 9e-63 UniRef50_P25544 RuBisCO operon transcriptional regulator n=13 Ta... 242 9e-63 UniRef50_B5JQV8 LysR substrate binding domain protein n=1 Tax=Ve... 242 1e-62 UniRef50_C7QKA9 Transcriptional regulator, LysR family n=1 Tax=C... 242 1e-62 UniRef50_B5WR38 Transcriptional regulator, LysR family n=2 Tax=B... 242 1e-62 UniRef50_Q2SMF3 Transcriptional regulator n=1 Tax=Hahella chejue... 242 1e-62 UniRef50_UPI000178A79D transcriptional regulator, LysR family n=... 242 1e-62 UniRef50_B9YZG6 Transcriptional regulator, LysR family n=1 Tax=L... 242 1e-62 UniRef50_A0B0Y3 Transcriptional regulator, LysR family n=4 Tax=B... 242 2e-62 UniRef50_D1VD43 Transcriptional regulator, LysR family n=1 Tax=F... 242 2e-62 UniRef50_Q46MA3 Transcriptional regulator, LysR family n=1 Tax=R... 241 2e-62 UniRef50_A3XB80 Transcriptional regulatory protein, LysR family ... 241 2e-62 UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=... 241 2e-62 UniRef50_Q7MCP0 Transcriptional regulator n=17 Tax=Vibrionales R... 241 2e-62 UniRef50_B2T513 Transcriptional regulator, LysR family n=65 Tax=... 241 2e-62 UniRef50_Q21IY2 Transcriptional regulator, LysR family n=2 Tax=G... 240 3e-62 UniRef50_A9B3V4 Transcriptional regulator, LysR family n=1 Tax=H... 240 4e-62 UniRef50_O32186 Uncharacterized HTH-type transcriptional regulat... 240 4e-62 UniRef50_A0NS29 Transcriptional regulator, LysR family protein n... 240 5e-62 UniRef50_A6F002 Transcriptional regulator, LysR family protein n... 240 5e-62 UniRef50_B5WW96 Transcriptional regulator, LysR family n=2 Tax=B... 240 6e-62 UniRef50_B5HHH0 YwqM n=1 Tax=Streptomyces pristinaespiralis ATCC... 240 6e-62 UniRef50_C7QF45 Transcriptional regulator, LysR family n=1 Tax=C... 239 9e-62 UniRef50_A5VE27 Transcriptional regulator, LysR family n=1 Tax=S... 239 9e-62 UniRef50_C6AY75 Transcriptional regulator, LysR family n=3 Tax=P... 239 1e-61 UniRef50_Q1LN85 Transcriptional regulator, LysR family n=1 Tax=C... 238 1e-61 UniRef50_Q15PU3 Transcriptional regulator, LysR family n=4 Tax=A... 238 2e-61 UniRef50_A4FE82 LysR-family transcriptional regulator n=5 Tax=Ac... 237 3e-61 UniRef50_B1I114 Transcriptional regulator, LysR family n=1 Tax=C... 237 3e-61 UniRef50_Q67PU0 LysR family transcriptional regulator n=1 Tax=Sy... 237 3e-61 UniRef50_B6R8G5 Transcriptional regulator, LysR family n=1 Tax=P... 237 3e-61 UniRef50_Q8Y2W8 Probable transcription regulator protein n=1 Tax... 237 4e-61 UniRef50_C6HY10 Transcriptional regulator, LysR family n=1 Tax=L... 237 4e-61 UniRef50_C4ZKW2 Transcriptional regulator, LysR family n=1 Tax=T... 237 4e-61 UniRef50_Q2RHG4 Transcriptional regulator, LysR family n=1 Tax=M... 237 4e-61 UniRef50_D0J686 Transcriptional regulator, LysR family n=1 Tax=C... 237 4e-61 UniRef50_A3ZYQ6 Transcriptional regulator, LysR family protein n... 236 6e-61 UniRef50_Q3A8F8 Transcriptional regulator, LysR family n=1 Tax=P... 236 8e-61 UniRef50_UPI000178953B transcriptional regulator, LysR family n=... 236 9e-61 UniRef50_C7I3E5 Transcriptional regulator, LysR family n=1 Tax=T... 236 9e-61 UniRef50_B9ZSB8 Transcriptional regulator, LysR family n=4 Tax=B... 235 1e-60 UniRef50_A3EQ05 Putative transcriptional regulator, LysR family ... 235 1e-60 UniRef50_P0ACQ6 Hydrogen peroxide-inducible genes activator n=27... 235 1e-60 UniRef50_A0LNI4 Transcriptional regulator, LysR family n=4 Tax=D... 235 1e-60 UniRef50_C1DAF5 LysR-family transcriptional regulator n=1 Tax=La... 235 1e-60 UniRef50_A2SKW7 Transcriptional regulator, LysR family n=24 Tax=... 235 1e-60 UniRef50_C7I2X4 Transcriptional regulator, LysR family n=1 Tax=T... 235 1e-60 UniRef50_Q4ZRN4 Regulatory protein, LysR:LysR, substrate-binding... 235 2e-60 UniRef50_B9Z5R7 Transcriptional regulator, LysR family n=1 Tax=L... 234 4e-60 UniRef50_C6J455 LysR family transcriptional regulator n=2 Tax=Ba... 234 4e-60 UniRef50_C8WV81 Transcriptional regulator, LysR family n=2 Tax=A... 234 4e-60 UniRef50_C7RPQ0 Transcriptional regulator, LysR family n=1 Tax=C... 234 4e-60 UniRef50_C1ZI46 Transcriptional regulator, COG0583 n=1 Tax=Planc... 234 4e-60 UniRef50_Q4ZQQ6 Regulatory protein, LysR:LysR, substrate-binding... 233 5e-60 UniRef50_A9VZZ7 LysR substrate-binding n=2 Tax=Rhizobiales RepID... 233 7e-60 UniRef50_C8WUA0 Transcriptional regulator, LysR family n=1 Tax=A... 233 7e-60 UniRef50_A4SIM7 Transcriptional regulator, LysR family n=3 Tax=G... 233 8e-60 UniRef50_C7JCS7 Transcriptional regulator LysR n=11 Tax=Proteoba... 232 9e-60 UniRef50_D2LGY9 Transcriptional regulator, LysR family n=1 Tax=R... 232 1e-59 UniRef50_C9RA29 Transcriptional regulator, LysR family n=1 Tax=A... 232 1e-59 UniRef50_A6UC84 Transcriptional regulator, LysR family n=5 Tax=A... 232 2e-59 UniRef50_Q1AUB8 Transcriptional regulator, LysR family n=2 Tax=B... 232 2e-59 UniRef50_A7IBY1 Transcriptional regulator, LysR family n=15 Tax=... 232 2e-59 UniRef50_Q4KF30 Transcriptional regulator, LysR family n=5 Tax=P... 232 2e-59 Sequences not found previously or not previously below threshold: UniRef50_Q31FC6 Transcriptional regulator, LysR family n=7 Tax=P... 254 4e-66 UniRef50_C7RSN5 Transcriptional regulator, LysR family n=1 Tax=C... 234 4e-60 UniRef50_B9XBB1 Transcriptional regulator, LysR family n=2 Tax=V... 234 4e-60 >UniRef50_C5BE75 HTH-type transcriptional regulator PecT n=26 Tax=Enterobacteriaceae RepID=C5BE75_EDWI9 Length = 333 Score = 317 bits (813), Expect = 4e-85, Method: Composition-based stats. Identities = 143/294 (48%), Positives = 206/294 (70%), Gaps = 1/294 (0%) Query: 1 MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR 60 MI RPI NL+LDLLRTF+AV + N+FAAAA +V RTQSA+SQQMQRLE L+GKELF R Sbjct: 28 MIQIQRPIPNLELDLLRTFIAVVEGNSFAAAAESVHRTQSAISQQMQRLESLIGKELFVR 87 Query: 61 HGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNR 120 GR K LTEHG+++LGYAR+IL NDEAC SLM+ ++ GVL IG+ D++A+TILP LL R Sbjct: 88 SGRGKSLTEHGVKMLGYARRILNLNDEACLSLMYDDVDGVLRIGSPDDTANTILPELLAR 147 Query: 121 VSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYI 180 S YP+L +++ VKR+ ++ E L++ E+D+ ++T + + LR+SP+ W+C Y Sbjct: 148 FSKAYPRLIIEIVVKRSPFLMEALKNDEIDMAISTTECTDYSGFILRSSPSLWFCGLNYK 207 Query: 181 LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 P+PLV LD+PS +R+M + L + IPWR+AY A+TL RAAV AGLGV AR + Sbjct: 208 FDADTPLPLVSLDEPSTYRNMAINHLERFGIPWRIAYTATTLSGARAAVAAGLGVMARSI 267 Query: 241 EMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM-ESYHNPWQY 293 E+ DL +L +GLP LP+ ++ L ++ + A+V+++++ + +P + Sbjct: 268 ELFGDDLCILGESEGLPKLPNIKFNLYIRRNNPPKAAKVLFESLYQENFSPERP 321 >UniRef50_C0QAW4 HTH-type transcriptional regulator (LysR family protein) n=2 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QAW4_DESAH Length = 282 Score = 313 bits (804), Expect = 4e-84, Method: Composition-based stats. Identities = 83/280 (29%), Positives = 154/280 (55%), Gaps = 2/280 (0%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +NL +D LRTFV++A+ F + R+QSAVS Q++RLE+ +GK+LF R G++ LT Sbjct: 1 MNLPIDYLRTFVSLAETKGFTRTGIQLNRSQSAVSMQIKRLEEEIGKKLFERIGKSVKLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L+ YA +I++ +D+A +L +L+G + G+ + +LP LL R +S YP + Sbjct: 61 PEGNILIKYAMRIIKEHDDAVRALSKPDLEGFIRFGSPEHYTTGVLPKLLARFASAYPDV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 +++R + + + E ++ E+D+ + T + P W A E+I+QK + +P Sbjct: 121 LVEMRCENSDKIKEAVDRGEIDIGICTQISDG--GQIISHDPVVWVAAPEFIMQKHKTLP 178 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 + + ++ FR + L K+ I +R+AYV+ ++ + AVKAG+ V + + +L+ Sbjct: 179 IAVFEEDCIFRSWAIEALEKSGIRYRIAYVSRSISGLLDAVKAGIAVAPIILSNVPAELK 238 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYH 288 + GLP LP + +L +E+ + + + + Sbjct: 239 TVDLEHGLPVLPVSNIVLHKTKKKTSEIIECFSEHIIRFF 278 >UniRef50_P52662 HTH-type transcriptional regulator pecT n=151 Tax=Enterobacteriaceae RepID=PECT_DICD3 Length = 316 Score = 310 bits (796), Expect = 4e-83, Method: Composition-based stats. Identities = 193/289 (66%), Positives = 236/289 (81%) Query: 1 MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR 60 M + +RP++NLDLDLLRTFVAVADLNTFAAAA AVCRTQSAVSQQMQRLEQL+GKELFAR Sbjct: 1 MTNTSRPVLNLDLDLLRTFVAVADLNTFAAAAVAVCRTQSAVSQQMQRLEQLIGKELFAR 60 Query: 61 HGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNR 120 HGRNKLLTEHGIQ LGYARKIL+FNDEAC+SLM+S++QG LTIGASD++ADTILPF+L R Sbjct: 61 HGRNKLLTEHGIQFLGYARKILQFNDEACASLMYSDIQGTLTIGASDDTADTILPFILQR 120 Query: 121 VSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYI 180 V++V+PKL++ V +KR+A M +ML+ ++DL++TT + LRTSPT WYC+A+Y Sbjct: 121 VTNVFPKLSIAVSIKRSAEMTDMLQQGKIDLVITTSNNDDLPHVLLRTSPTLWYCSADYQ 180 Query: 181 LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 Q GE + LV+LD+PSPFR + L L A IPW+++YVASTL AVRAAVKAGLG+T R V Sbjct: 181 YQPGETVSLVVLDEPSPFRALALDQLTAAGIPWKISYVASTLSAVRAAVKAGLGITVRSV 240 Query: 241 EMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 EMMSP+LRVL +GLP LPDT Y LC +P +NEL I+ A+ES Sbjct: 241 EMMSPELRVLGEEEGLPKLPDTRYYLCRNPDHDNELTNAIFSAIESGTR 289 >UniRef50_B9K1U5 Transcriptional regulator LysR family n=59 Tax=Alphaproteobacteria RepID=B9K1U5_AGRVS Length = 332 Score = 303 bits (776), Expect = 6e-81, Method: Composition-based stats. Identities = 94/286 (32%), Positives = 158/286 (55%), Gaps = 3/286 (1%) Query: 1 MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR 60 M + + P LD D L+TF+A+ D +F AA V +TQSAVS QM+RLE+ +GK+LF + Sbjct: 13 MSAMSAP---LDTDQLQTFIAIVDTGSFTKAAGRVFKTQSAVSMQMRRLEERIGKQLFIK 69 Query: 61 HGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNR 120 GR LT G +LL YAR+I+R N EA ++ + L+G L IG D+ AD +P ++ R Sbjct: 70 DGRGNRLTAEGEKLLNYARRIVRLNSEAIAAFDDNRLEGTLRIGTPDDYADRYMPEIIGR 129 Query: 121 VSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYI 180 + +P + L + + ++ +AE + E+D+ + TH P+ ++ +RT P W +A + Sbjct: 130 FAKTHPNVELYIVCEPSSDLAEKMARGELDIALVTHNPATRQSDVMRTEPLCWVASANHP 189 Query: 181 LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 L+ P+PL + +R + + L+ +++ + + + V AAV AGL V+ P Sbjct: 190 LRDDAPVPLAVGRRDCNWRQLACSALDADGRDYQILFTSWSSTVVAAAVLAGLAVSVLPE 249 Query: 241 EMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 + ++VL +DG PPLP + + P + L I + + Sbjct: 250 SALRTGMKVLGQLDGFPPLPPVQIGIMKRPGMSPSLMNAITDHIAA 295 >UniRef50_Q07TP5 Transcriptional regulator, LysR family n=10 Tax=Rhizobiales RepID=Q07TP5_RHOP5 Length = 305 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 88/280 (31%), Positives = 139/280 (49%), Gaps = 2/280 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDLDLLR+FV+V D F A V RTQS VSQQ++RLE +G++L R G+ TE Sbjct: 20 LDLDLLRSFVSVVDSGGFTRAGERVHRTQSTVSQQIKRLEDDLGQQLLNRDGKTVTPTEA 79 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LL YAR++L +EA + + G + +G ++ A L LL R S P L L Sbjct: 80 GERLLSYARRLLSLAEEARDVVARPHQDGAVRLGIPEDFAAYRLTRLLARFSRARPGLRL 139 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYIL-QKGEPIPL 189 DVR ++ + +E ++DL + A+ + HW + + K + +PL Sbjct: 140 DVRADQSLNLTRDIERGDLDLALLKREAGGRSAIAVWPERVHWVNSRNHPCNAKADSVPL 199 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 + +R + + A W LAY +S+L ++AAV AGLG++ + D Sbjct: 200 IFFPSGCLYRSRAIHAIEAAGRRWHLAYSSSSLAGIQAAVAAGLGLSILSDMSIGTDHHK 259 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 L+ DG PP+ +TE L P + + + + + + Sbjct: 260 LTARDGFPPIDNTELALVAAPEA-SPATLRLADKLAEFCD 298 >UniRef50_C8X2B4 Transcriptional regulator, LysR family n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X2B4_DESRD Length = 309 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 95/305 (31%), Positives = 145/305 (47%), Gaps = 4/305 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 ++D LLR FV VA+L +F AA + RTQSAVS Q++RLEQ +GK+L AR R LT Sbjct: 4 KDIDSQLLRAFVTVAELGSFTRAATKLYRTQSAVSMQVRRLEQQLGKKLLARSSRQVTLT 63 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G +L YAR+ILR + + + + G + +G D+ A LP +L+ +YP + Sbjct: 64 SLGEMVLPYARRILRIQEAMLNEVGQEQISGKVRLGMPDDYAAYFLPQVLSHFGLLYPNI 123 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 +++ + + + M+ S E+DL V T P +R W A+ + +P+P Sbjct: 124 QMEIFCELSRNLEPMVHSGEIDLAVVTRHPENASGRFVRREQLVWVEDAQAFAHEQQPLP 183 Query: 189 LVLLDDP-SPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 L L + FR L L A PWR+ + L +RA V AGL VT +SP + Sbjct: 184 LALFPEGYCAFRLQALKALENAGTPWRIICESRGLAGIRATVSAGLAVTVVTRNTLSPTM 243 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNP---WQYSPMSAPEGDDS 304 R++ GLP LP+ E L +E V+ + +P P ++ Sbjct: 244 RIIGPEQGLPDLPEIEIGLLTPGWGEDEATDVLASHILESLRHEGNGTATPEVEPLSNEP 303 Query: 305 LLIER 309 Sbjct: 304 SAPRG 308 >UniRef50_Q4K8T2 Transcriptional regulator, LysR family n=16 Tax=Pseudomonas RepID=Q4K8T2_PSEF5 Length = 284 Score = 300 bits (769), Expect = 5e-80, Method: Composition-based stats. Identities = 92/281 (32%), Positives = 154/281 (54%), Gaps = 4/281 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQL-VGKELFARHGRNKLL 67 ++D ++LRTFVA+AD F A V RTQSAVS QM+RLE+ + ++LF R GR L Sbjct: 5 PSIDTEVLRTFVAIADEGGFTRAGERVNRTQSAVSMQMKRLEEDVLQRQLFQRDGRQVKL 64 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G LLGYAR+IL+ + E ++L ++ G++ IG D+ LP +L+R + YP Sbjct: 65 TAEGQVLLGYARRILKLHSEVFNTLREPHMVGLVRIGTPDDYVMRFLPGILSRFAQSYPL 124 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + ++V + + + L+ Q++DL + T P LR W A + + P+ Sbjct: 125 IQIEVHCESSKQL---LQRQDLDLTIVTREPGNEIGQLLRKERFVWAVAQCFTPHEQTPL 181 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL + + R L+ + +R+AY +S+L A+ A V AGL +TA+ +++PDL Sbjct: 182 PLAMFNSDCFCRLWACNALDAIGLDYRIAYNSSSLSAIMAVVSAGLAITAQLESLITPDL 241 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYH 288 R+L +GLP LP+ +L + + + + + + + + Sbjct: 242 RILGENEGLPELPEASIMLLRNLNQPSPITECLAEHIVEGF 282 >UniRef50_C1DFD4 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=C1DFD4_AZOVD Length = 317 Score = 297 bits (761), Expect = 4e-79, Method: Composition-based stats. Identities = 131/295 (44%), Positives = 187/295 (63%), Gaps = 4/295 (1%) Query: 1 MISANR----PIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKE 56 M++A R P LDL+LLRTF+AVAD +FA A + RTQS+V+QQMQRLEQ VG Sbjct: 8 MMNAERKAPMPSPTLDLELLRTFIAVADSQSFAEAGQRLARTQSSVTQQMQRLEQSVGVA 67 Query: 57 LFARHGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPF 116 LF + GR K LT+ G QLL AR++L ND+A +SL L GVL IG+ + ADTILP Sbjct: 68 LFQKQGRQKQLTDAGRQLLRRAREMLALNDDALNSLREEGLSGVLRIGSPHDVADTILPP 127 Query: 117 LLNRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCA 176 +L+ ++ P+L L++ V R+ ++ E L VD++++T + LRTSP W C+ Sbjct: 128 ILSHIARAAPRLRLEIDVGRSPFLMEDLHRGRVDMIISTREDPNLEGFPLRTSPVWWICS 187 Query: 177 AEYILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 A+Y+ P+PL+L+D+ S + L L + IPWR AY AS L V+AA++AGLG+T Sbjct: 188 AQYLHMPHAPLPLILIDESSIYHRYALEALEQHRIPWRQAYQASNLIGVKAAIRAGLGIT 247 Query: 237 ARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPW 291 AR +E++ PD+RVL +GLP LPD Y L P+++N + + Y + S+H Sbjct: 248 ARSMELLGPDMRVLGEKEGLPRLPDVTYHLWIRPNTHNPMVRKAYDLIRSHHEAA 302 >UniRef50_A6FDC4 Putative uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6FDC4_9GAMM Length = 293 Score = 297 bits (761), Expect = 4e-79, Method: Composition-based stats. Identities = 93/286 (32%), Positives = 147/286 (51%), Gaps = 1/286 (0%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +N D LR+FV VA+L +F+ ++ +CR QSA+SQQ+Q+LE+ V LF R+ LT Sbjct: 1 MNFDTSQLRSFVTVAELKSFSKSSERLCRVQSAISQQIQKLEKQVNAVLFIRNRNGVTLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G +LL YA K+L NDEA S+L + +G L +G SD A L +L S YP L Sbjct: 61 AQGERLLPYAVKMLSINDEAVSALCENQPKGWLRVGTSDTYATCFLKDILMSCSERYPGL 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 ++V + + M E ++D+++T PS + L P W C+ + K P+P Sbjct: 121 QIEVHCGYSESIWTMYEKGQLDIVLTQCCPSNINSETLHVEPLLWMCSRTSDVYKKTPVP 180 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L L R++ L L + + + + +S+ + AAV +G V+A + D + Sbjct: 181 LALFSKGCADREIALNGLVQVGKDYTMGFHSSSHAGILAAVSSGYYVSAILASTSNQDFK 240 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYS 294 VL+ DG PPL + E + Y+ ++N Q+ + Y W S Sbjct: 241 VLTETDGFPPLGNLEISMAYNDHADNSPTQMFACVVREYFR-WSRS 285 >UniRef50_C7C7Z1 Transcriptional regulator, LysR family n=4 Tax=Alphaproteobacteria RepID=C7C7Z1_METED Length = 322 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 147/291 (50%), Gaps = 4/291 (1%) Query: 3 SANRPIIN--LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR 60 + + LD DLLR F+ + + +F AA + RTQS VS Q++RLE +G+ +F R Sbjct: 15 PTEYRMPDSPLDFDLLRAFLHIVESGSFTRAAERIGRTQSTVSLQIKRLEDGLGRRVFDR 74 Query: 61 HGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNR 120 GR+ LT G LLGYAR+IL +E C+ +M + GV+ +G ++ A LP +L R Sbjct: 75 DGRDLQLTPEGEILLGYARQILSLGNEVCARIMEPEVDGVVRLGTPEDFATAHLPDVLAR 134 Query: 121 VSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAF-KALNLRTSPTHWYCAAEY 179 + +P+++L+V ++ + DL++ P + + W + Sbjct: 135 FARAHPRVSLEVHCDFTVHLLDGFSRGLYDLVLLKREPQGPGGGVGIWCEVLEWVASPGL 194 Query: 180 ILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARP 239 L G PIPLVL P +R L L A +PWR+ Y + +L ++AAV AGLGVT P Sbjct: 195 ALGSG-PIPLVLAPAPDVYRKRALQALEAARLPWRIVYTSQSLLGLQAAVSAGLGVTVLP 253 Query: 240 VEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNP 290 M+ L +SG G P LP TE +L P S A ++ + + Sbjct: 254 KGMIQSGLIRVSGTYGFPALPATEVVLYRAPGSLPRAADLLAEHIMHALEA 304 >UniRef50_B1LTB4 Transcriptional regulator, LysR family n=4 Tax=Alphaproteobacteria RepID=B1LTB4_METRJ Length = 298 Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 146/292 (50%), Gaps = 1/292 (0%) Query: 7 PIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKL 66 P + DLDLLRTFVA+ D +F AA+ + TQS VS Q++RLE + + LF R GR Sbjct: 4 PSLPFDLDLLRTFVAIVDNGSFTRAASRLGLTQSTVSLQIKRLEDGLTRRLFDRDGRELK 63 Query: 67 LTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYP 126 LT G LL YAR+IL+ E S ++ L GV+ +G ++ A T L +L + +P Sbjct: 64 LTSEGEVLLTYARQILKLGGEVLSKIVTPELTGVVRLGTPEDFATTHLSEVLACFARAHP 123 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFK-ALNLRTSPTHWYCAAEYILQKGE 185 ++AL+V + + D+++ P + W + + + Sbjct: 124 QVALEVNCDFTVNLLDDFSKGRYDMILFKREPQGPSGGTKVWREVLDWVASPRLVAEGNG 183 Query: 186 PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSP 245 PIPLVL P +R L+ L+ A WR+ Y + +L ++AAV+AGLGVT P EM+ Sbjct: 184 PIPLVLSPAPDVYRKRALSALDAAGRDWRIVYTSPSLAGLQAAVQAGLGVTVLPTEMVPE 243 Query: 246 DLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMS 297 D+ +S LP L DTE +L P + Q++ + + P + Sbjct: 244 DMVSVSARLRLPKLSDTEIVLYQAPGHVSPAVQLLSTTIVAALERRVAVPAT 295 >UniRef50_A0NUY3 Transcriptional regulator n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NUY3_9RHOB Length = 296 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 85/278 (30%), Positives = 152/278 (54%), Gaps = 1/278 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD+D LRTF+A+A+L +F A AV +TQSAVS QM+RLE+ VG+ +F + GR LTE+ Sbjct: 5 LDIDQLRTFLAIAELGSFTKAGEAVHKTQSAVSMQMRRLEERVGQPIFIKDGRQSRLTEN 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G++L+ +AR+++ NDE S+ G + +G D+ AD +LP +L + + P + + Sbjct: 65 GLRLVEFARRMIMLNDETLSAFNGQKEVGHVKLGVPDDYADRLLPQVLAAFNRLNPSIEV 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPS-AFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 V + + E + +D+ +TT + + + +R P +W A+++ + + L Sbjct: 125 QVECISSHRLTEAIREGTLDVAITTSQDTMDLRGEIIRREPLYWVTASQHSAHTQDVVRL 184 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 L +R + + L++A P+R++Y +S+ A+ AV+AGL VT P + +R+ Sbjct: 185 ALGPVTCGWRRLSMDALDRAGRPYRVSYTSSSAAALVGAVQAGLAVTVFPESAIRDGMRI 244 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 L DG P LP + L ++ + + + + Sbjct: 245 LDEKDGFPTLPYCDIALLRSDTAREAMHDTLCNHLVAA 282 >UniRef50_B0FL86 Putative LysR family transcriptional regulator n=1 Tax=Mesorhizobium sp. F28 RepID=B0FL86_9RHIZ Length = 361 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 91/299 (30%), Positives = 139/299 (46%), Gaps = 4/299 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + DLLRTFV VA+ F+ AA + TQS VS Q++RLE + R R+ LTE Sbjct: 58 FEPDLLRTFVMVAECGGFSRAAERLNSTQSTVSHQIKRLESQAARTFLNRTTRSLSLTED 117 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L+ YARK LR D+A L+G + + ASD+ A LP +L R V+P++ L Sbjct: 118 GEVLIDYARKFLRLADDAKQHFNSPRLKGHVRLAASDDFATYSLPEILGRFKRVHPEVRL 177 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 V V + + L+ E DL++ + W A + ++ +P+PL Sbjct: 178 TVDVGLSGNLVSRLDEGEFDLVLGKRSLGETDGELVSREKLVWVAAPDIVINPHQPLPLA 237 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 + P +R + LN A W + Y + +L +RAA AG+ VT ++PDL L Sbjct: 238 VYPKPCLYRSTAIEVLNAAGRSWNVVYTSPSLSGIRAAAIAGIAVTPLAANFVTPDLMCL 297 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN----PWQYSPMSAPEGDDSL 305 + LP LPD E+ L S A+ + + + PW + P++ Sbjct: 298 DPDEDLPELPDVEFALFRTRSVETPAARELAELLLRARPLGIFPWHHKPLTGEANSLPS 356 >UniRef50_Q1R159 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=Q1R159_CHRSD Length = 299 Score = 290 bits (743), Expect = 5e-77, Method: Composition-based stats. Identities = 98/296 (33%), Positives = 150/296 (50%), Gaps = 3/296 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 LDL +L TFV V D F AAA A+ QS VS M+RLE G+ L R + + + Sbjct: 5 RPLDLVVLNTFVTVVDKGGFTAAADALYLAQSTVSAHMKRLEDTFGQPLLQRGRKTPVPS 64 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G +LL +AR++LR N A + L GV+ +G D+ LP L+ + YP + Sbjct: 65 PAGERLLSHARQMLRQNALAWQDVSEQRLDGVVRLGIPDDYVVY-LPEALSEFEAQYPGV 123 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 L V + + + + + +DL +TT +P + L PT W AA + Q+ P+P Sbjct: 124 ELQVDCGLSVDLVQSVRAGSLDLAITTRQPKSPGGEVLCREPTVWAGAAGHDTQRRTPLP 183 Query: 189 LVLLDDP-SPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 L + D FR+ LA L+ IPWR+AY +++L + AAV+AGL +T M+ L Sbjct: 184 LAVSKDGVCIFRERALAALDAMGIPWRIAYTSASLSGLTAAVRAGLAITVLTPSMLGAGL 243 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY-HNPWQYSPMSAPEGD 302 RV+ +GLP LP TE L P NE + + +++++ P++A Sbjct: 244 RVIGSGEGLPELPMTEIALHRSPGRPNEATRQLALSLQTHIQARSATLPVTAAPMS 299 >UniRef50_Q2SFI4 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFI4_HAHCH Length = 296 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 94/303 (31%), Positives = 142/303 (46%), Gaps = 12/303 (3%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + L DLL+TFVAVAD F A A+ R+Q A+S Q++RLE+LVG L R+ + Sbjct: 1 MNYLPTDLLQTFVAVADYGGFTQAGDALGRSQPAISLQIRRLEELVGATLLLRNNKALAP 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G+ LL YAR IL N EA L L G L +G +E A + LP +L + S +P Sbjct: 61 TPEGLILLQYARDILALNKEAMIKLSQPELAGCLRLGIPNEFASS-LPEVLGKFSQAHPN 119 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSA-FKALNLRTSPTHWYCAAEYILQKGEP 186 + L+V ++ + E S+E+DL+ H W + + P Sbjct: 120 VTLEVTCDLSSNLVERYRSKELDLVFALHTSLRTISPEEGWMEDLVWATSIHHTCHTRHP 179 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +PL++ +R ++ L+ IPWR+ Y ++ +RA V AGLGVT ++ Sbjct: 180 VPLIVAPRGCVYRHRIIEALDSMSIPWRIVYTCASFSGIRAGVLAGLGVTVLGKSIVPEG 239 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPEGDDSLL 306 LRV+ D LP LP + L Y+ + Q + +AP D L Sbjct: 240 LRVVESSDYLPALPGVQMRLLYNREQTSPAVAGFVQFISR----------TAPVAGDGLS 289 Query: 307 IER 309 ++ Sbjct: 290 LDG 292 >UniRef50_Q4ZQB6 Regulatory protein, LysR:LysR, substrate-binding n=5 Tax=Pseudomonas syringae group RepID=Q4ZQB6_PSEU2 Length = 296 Score = 288 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 95/283 (33%), Positives = 150/283 (53%), Gaps = 4/283 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLV-GKELFARHGRNKLL 67 ++D +LLRTFVA+AD F A AV RTQSAVS QM+RLE+ V + LF R GR L Sbjct: 17 PSIDTELLRTFVAIADHGGFTRAGEAVNRTQSAVSMQMKRLEEDVVQRPLFQREGRVLNL 76 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G LLGYAR+IL+ + E ++L ++ GV+ IG+ D+ LP +L + + YP Sbjct: 77 TAEGQVLLGYARRILKLHSEVFNTLREPHMIGVVKIGSPDDYVMRFLPGILAQFAQAYPL 136 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + ++V + + + L+ ++DL + T +P LR W A + + PI Sbjct: 137 VQVEVHCEPSDLL---LQRHDLDLTIVTRKPGTEIGTLLRQERLMWMEAVGFAPHEQTPI 193 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL + + RD L+ +R+AY +S++ A+ A V AGL VTA+ + + DL Sbjct: 194 PLAMFNTHCFCRDWACNALDGMGRDYRIAYSSSSMAAITAVVSAGLAVTAQFQSLATADL 253 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNP 290 R+L + P LP +L P + + + + + + + P Sbjct: 254 RILGEAEQFPQLPTASIVLLRKPENPSPITECMADYIIAGFKP 296 >UniRef50_Q0G3C9 Transcriptional regulator, LysR family protein n=2 Tax=Aurantimonadaceae RepID=Q0G3C9_9RHIZ Length = 323 Score = 287 bits (737), Expect = 2e-76, Method: Composition-based stats. Identities = 80/293 (27%), Positives = 145/293 (49%), Gaps = 3/293 (1%) Query: 12 DLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHG 71 DL+ LRTFVA+ D +F AA V +TQSAVS Q++RLE+ +G LF R+GR +T+ G Sbjct: 6 DLEQLRTFVAIVDAGSFTKAAEDVFKTQSAVSMQIRRLEERLGTRLFERNGRAIEVTDSG 65 Query: 72 IQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALD 131 +LL YAR++L + E S+ + +QG + IG D+ A+ LP +L R S P + L Sbjct: 66 QRLLSYARRMLTLSQETLSAFDENAMQGAVRIGLPDDYAERFLPEILARFSRSNPLVELS 125 Query: 132 VRVKRNAYMAEMLESQEVDLMVTTHRPSAFKAL-NLRTSPTHWYCAAEYILQKGEPIPLV 190 + + ++ +A+ + +D+ + + + L +R P H+ ++ + + +PL Sbjct: 126 IACEPSSNLADAIAKGRLDVALVSDCGTDGAKLDIVRHEPLHFVASSAHEAHLKDIVPLA 185 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 + +R + L +A + + + + + + +AV AGL + P + P +R+L Sbjct: 186 VGRADCKWRREGIEALERAGRRYNVLFSSWSAQVLISAVLAGLAIGVLPECALRPGMRIL 245 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPEGDD 303 DG P L T + +++ + + + P +AP Sbjct: 246 GERDGFPKLNHTAIGVLRSANASGAIVTALVDHIRDSLA--NLVPANAPAAQP 296 >UniRef50_A3JCT6 Transcriptional regulator, LysR family protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JCT6_9ALTE Length = 291 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 115/287 (40%), Positives = 172/287 (59%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + +LDL LLRTFVA+ D FA AA V ++Q A+SQQM RLE + LF + GR K L Sbjct: 1 MRHLDLSLLRTFVAICDEENFAKAALKVHKSQPAISQQMGRLENELQVSLFIKCGRRKKL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G++L YAR++L +DE ++L L G + IGA + ADT+LP +L + P+ Sbjct: 61 TAAGVRLSEYARRLLALHDELWTTLDDQELIGPVRIGAPADIADTVLPSILQSFARANPR 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 L++ + V R+ + +ML + E+DL ++T + + L LR+SP W A++Y L EP+ Sbjct: 121 LSMAIHVGRSPDLMDMLFAGELDLTISTRKADGYPNLVLRSSPVVWIAASDYQLVSDEPL 180 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 LVL D+PS FR + L L + ++ +Y+A L ++AAV+AGLG+TAR +EM++P+ Sbjct: 181 SLVLADEPSIFRAIALEALTREQWDYKESYIAPNLAGIKAAVRAGLGITARSIEMVTPEF 240 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYS 294 RVL GLP LP + L S +E A+ +YQ + S S Sbjct: 241 RVLGKHQGLPSLPIINFHLYLRNDSPSEAARKLYQLLASQVGGASPS 287 >UniRef50_Q390C5 Transcriptional regulator, LysR family n=7 Tax=Burkholderia RepID=Q390C5_BURS3 Length = 323 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 98/286 (34%), Positives = 148/286 (51%), Gaps = 4/286 (1%) Query: 3 SANRPII--NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR 60 NR + NLD+D LRT +A L + AA + R+QSAVSQQM++LE +G+ LF R Sbjct: 18 KKNRIMTLPNLDMDALRTLIAADRLGSLNRAADRIGRSQSAVSQQMRKLETQIGQPLFRR 77 Query: 61 HGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNR 120 GR + TE G +L YAR+IL NDEA ++ + ++G + G + A++ LP L + Sbjct: 78 QGRGLVPTEAGELMLSYARRILELNDEAVGAIRGAAIEGAVRFGLPGDFAESWLPVALGQ 137 Query: 121 VSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYI 180 +P + +D+ V N + + L+ E+D+++ R A +L T P W Sbjct: 138 FKRTHPGVRVDIVVDGNGALLDRLDGGELDIVLAMGRGHRADAEHLVTLPMAWIGPQGID 197 Query: 181 LQKGEPIP--LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 ++ +P L L P FR L+KA IPWRLAY +L ++ A V GLG++AR Sbjct: 198 VRPRAGVPLDLALYKPPCLFRKAGTDALDKAGIPWRLAYTTGSLQSLWAGVAGGLGISAR 257 Query: 239 PVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 + + P LR L DGLPPLP + L + + + Sbjct: 258 TMVGVPPALRQLGERDGLPPLPSVDVCLHAGEGDAPSALANLKRVV 303 >UniRef50_Q07MM7 Transcriptional regulator, LysR family n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07MM7_RHOP5 Length = 287 Score = 283 bits (726), Expect = 4e-75, Method: Composition-based stats. Identities = 94/282 (33%), Positives = 146/282 (51%), Gaps = 4/282 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 ++LDL+L+RTF+AV D F A + +TQS +S ++RLE++VG+ LF R GR+ +LT Sbjct: 1 MDLDLELVRTFLAVIDHGGFTRAGGRLHKTQSTISLHIRRLEEIVGRPLFDRQGRHAVLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 E G L YA ++ NDEA L + G++ +G ++ A LP L R ++ +P + Sbjct: 61 EQGEILRTYAEALVGLNDEALLKLRRPPVTGIVRLGLPEDFATRHLPLALRRFTATHPAI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 L+VR A + L + ++D ++ A + L P W A L +P+P Sbjct: 121 RLEVRSSLTAELMRDLGNGDLDFVLARRELDATEGQLLWREPLIWVGARG-RLFSADPLP 179 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 LV+ +R VL + W + Y +S+L V+AAV AGLGVTA + PD Sbjct: 180 LVMFPHGCVYRPEVLRRMRSCPRAWEIVYTSSSLAGVQAAVSAGLGVTALAESTVLPDFA 239 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELA---QVIYQAMESY 287 VL +GLP LP T+ L N A + + +++ S Sbjct: 240 VLGAREGLPELPQTDIALFTGVGRNEAAAYLGEYLAESVRSL 281 >UniRef50_C6BGY1 Transcriptional regulator, LysR family n=2 Tax=Ralstonia pickettii RepID=C6BGY1_RALP1 Length = 289 Score = 282 bits (724), Expect = 8e-75, Method: Composition-based stats. Identities = 119/289 (41%), Positives = 183/289 (63%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + NLD+DLLRTFVA+A TFAAAAA V RTQSAV+QQMQRLE+ +G LF + GR+K + Sbjct: 1 MRNLDIDLLRTFVAIAHHETFAAAAARVGRTQSAVTQQMQRLEEEMGCALFEKRGRHKTM 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G++L+ YA KIL ND+A + + IG+ + AD+ILP LL R+S + P+ Sbjct: 61 TPDGVRLVAYAHKILALNDQAVQVIQTGGPIEKIRIGSPHDVADSILPNLLRRLSKLSPE 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 L +++ V R+ ++ + L + +DL ++T +AF + LRTSP W CA ++I P+ Sbjct: 121 LQMEINVGRSPFLMDALRDKTLDLAISTRYDNAFPGIKLRTSPMVWICAEDFIFNPAAPV 180 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PLV+ D+ S FR + + L+ IPWR +Y++ TL ++AA+ AGLGVTAR E++ ++ Sbjct: 181 PLVMADELSLFRQLSIECLDAHHIPWRTSYLSPTLTGIKAAISAGLGVTARTTELLDANM 240 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPM 296 RVL+ DGLP LP+ + L P+ + + + ++ + + + M Sbjct: 241 RVLTEADGLPRLPEVAFYLYVQPTCTSPVLRDLFDSTDRIATRFGPPFM 289 >UniRef50_B9JGF1 Transcriptional regulator protein n=57 Tax=Rhizobiales RepID=B9JGF1_AGRRK Length = 348 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 151/289 (52%), Gaps = 3/289 (1%) Query: 2 ISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARH 61 + RPI LD ++LRTFVA+A+ F+ AA AV RT SAVS Q+++LE+ +G LF R Sbjct: 52 VPFRRPIPLLDNEVLRTFVAIAETGNFSTAADAVFRTPSAVSMQIKKLEEQLGVTLFLRD 111 Query: 62 GRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRV 121 R+ LT+HG LL YAR IL ++EA S + L GV+ +GA D+ + +LP +L Sbjct: 112 ARSVSLTQHGEMLLSYARNILALSNEAVSRFIMPELSGVVRLGAPDDIGERLLPSILKSF 171 Query: 122 SSVYPKLALDVRVKRNAYMAEMLESQEVDLMVT--THRPSAFKALNLRTSPTHWYCAAEY 179 S YP + +DV V + + + +E Q +DL + RP + + T W A Sbjct: 172 SESYPSIMVDVVVDMSIQLKKRIEEQRLDLALINCATRPFPTEGEVIYTERLVWAGAKCG 231 Query: 180 ILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARP 239 + +P+P+ + +D +R LA L + P+R++Y+++ A RAA+ + L V P Sbjct: 232 TAYRRDPLPISIWEDGCIWRSEALAQLERHKRPYRVSYLSAHTMAQRAAIVSDLAVAPFP 291 Query: 240 VEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYH 288 + D+ +L +GLP L + L S + + ++ Sbjct: 292 RSYIGEDMEILGPNEGLPELTSFDIRLLTA-SQMTGPMKAVADSIREAF 339 >UniRef50_A9BYU9 Transcriptional regulator, LysR family n=22 Tax=Proteobacteria RepID=A9BYU9_DELAS Length = 306 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 152/292 (52%), Gaps = 6/292 (2%) Query: 6 RPI--INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGR 63 RP+ ++D LLR+F AVA+ +F AA V TQS VSQQ++RLE+ +G L R GR Sbjct: 13 RPMQPSSIDPTLLRSFCAVAETGSFTRAAQGVHLTQSTVSQQIRRLEEQMGCTLLDRSGR 72 Query: 64 NKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSS 123 + T G +LL YA++IL DEA L + VL IG ++ A L L ++ Sbjct: 73 HVECTLEGERLLAYAQRILALMDEAVEQLAGATEA-VLRIGVPEDFAGHALMPALGALAR 131 Query: 124 VYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQK 183 P+L L++ + + + L++ E+DL + R + + P W +A + Sbjct: 132 SQPQLRLELTSGLSQAIWQQLQAGELDLAIVKQRSGSTPGMARWPEPLAWIDSARHPCHG 191 Query: 184 GEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMM 243 +P+PLV+ +R + L+ A WRLAYV+++L ++ AAV+ GLG++ P ++ Sbjct: 192 MDPLPLVVFPQGGLYRSEMTHALDAAGRRWRLAYVSASLASLEAAVEQGLGISLLPRRLV 251 Query: 244 SPDLRVLSGVDGLPPLPDTEYLLCYDP---SSNNELAQVIYQAMESYHNPWQ 292 P R+L G+ G P+PD E L + LA+ + + E+ +P Sbjct: 252 GPGHRLLDGMAGFAPVPDVEVALHVRAPLSAPGRRLAERLSEVCEALLSPAA 303 >UniRef50_B6R8G3 Transcriptional regulator n=2 Tax=Rhodobacteraceae RepID=B6R8G3_9RHOB Length = 299 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 82/278 (29%), Positives = 149/278 (53%), Gaps = 1/278 (0%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 ++D+D LRTF+AVA+L +F A AV +TQSAVS QM++LE+ +G+ +F + GRN +TE Sbjct: 4 SIDVDQLRTFLAVAELGSFTKAGDAVHKTQSAVSMQMKKLEERIGQPIFVKDGRNSRITE 63 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 HG +L+ YAR+++ NDE S+ + G + +G D+ A+ +LP +L + + P + Sbjct: 64 HGRRLVEYARRMVALNDETLSAFHEPEIAGRIRLGLPDDYAERLLPQVLAAFNRLNPCIN 123 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTT-HRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 LDV + + ++ E+D+ + T ++ +R P W + E+I+ P+ Sbjct: 124 LDVECSSSNEIGRRIQKGELDVGIVTSGDCTSVPGQIVRREPLQWVGSREHIVYDQRPLR 183 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L + +R +A L+ +I ++ Y +++ A+ AV AGL + P + R Sbjct: 184 LAVGPTTCSWRQAGVAALDHLNIQHQVVYTSASAAALAGAVNAGLAIAILPASALRQGQR 243 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 +L +GLPPLP + + + + + + + Sbjct: 244 ILGEKEGLPPLPPCDITIIRSQMAIEPVHDALCHHIVA 281 >UniRef50_Q98HR2 Transcriptional regulator n=1 Tax=Mesorhizobium loti RepID=Q98HR2_RHILO Length = 285 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 87/282 (30%), Positives = 147/282 (52%), Gaps = 1/282 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDL+LL+TFVAV + + + AA V R+QSAVS QMQRLE++VG +L R R Sbjct: 5 LDLNLLKTFVAVVESGSLSNAAPRVGRSQSAVSMQMQRLEEMVGNQLLVRGPRTVTPNAI 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L YAR++L+ +DEA +S+ G + +G D+ A +LP +L+R + +P + + Sbjct: 65 GEDFLIYARRLLKLSDEAWASVTRPKETGSVRLGVPDDYAAFLLPPVLSRFAEDHPLVTV 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 ++ +++ + + L +DL + T P +R W + ++ + +P+P+ Sbjct: 125 ELICEQSTALVKTLAEGRLDLAIVTRLPDQP-LDVIRLERFVWVASPNHVAWQTDPLPVA 183 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 L + R VL L +AD +R Y +++L + A V+AGL V + P LR++ Sbjct: 184 LFEPGCAARMNVLQALGEADRSYRCTYSSASLLGLIAVVQAGLAVAGLAQRSVPPSLRII 243 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQ 292 G +GLP LPD E + +P S+ ++ + Sbjct: 244 GGNEGLPVLPDLEIGILRNPLSSTPAVDRLHDFLRRDLAQQA 285 >UniRef50_A3YDA6 Transcriptional regulatory protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YDA6_9GAMM Length = 283 Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 89/265 (33%), Positives = 143/265 (53%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L+LLRTF+AVA+ +F AA TQS VS Q++RLE+ +G+ LF R R+ LT+H Sbjct: 1 MNLELLRTFLAVAEGKSFTAATQKRFMTQSTVSHQIKRLEESLGQVLFVRTTRSCKLTDH 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L YARKI+ DE LQG +++ A ++ +L R + + P + L Sbjct: 61 GEILFTYARKIINLCDELDDKFSEKPLQGHVSLAAPEDYLSLPFSKILARFTRIQPDVEL 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 D+RV + + S E+DL V P + L W + ++ L + +PL Sbjct: 121 DIRVGLSETFRAQVTSGEIDLAVLAQIPPTGEGQPLYRDKLVWLASEDFHLGTHKSVPLA 180 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 L+ P +R +A L+K ++PW+LA + A+++AV +GL VT + + P ++VL Sbjct: 181 LVPSPCLYRKTAIAALDKQNMPWQLALNCHSHEAIKSAVISGLAVTVLTEKDLRPGMKVL 240 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNE 275 + DG P L ++E L + P +NE Sbjct: 241 TQKDGFPDLGESELSLHHAPHLSNE 265 >UniRef50_B3QIV6 Transcriptional regulator, LysR family n=4 Tax=Rhodopseudomonas palustris RepID=B3QIV6_RHOPT Length = 304 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 85/287 (29%), Positives = 143/287 (49%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDL LL+TF+ + +F+ + + RTQ AVS Q+ RLE+ G LF + GR +LT H Sbjct: 5 LDLRLLQTFIVLVQTGSFSETSRRLGRTQPAVSLQLNRLEEATGAPLFTKVGRKLVLTNH 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LGYAR I+ DE + L L GV+ +G D A +LP +L S YP + + Sbjct: 65 GELVLGYARTIMGLQDELRARLAAPKLDGVVVLGMPDLYAAYLLPGILADFRSAYPNVDV 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 +++ ++ + +E E+DL + T P+ + W + + P+PL Sbjct: 125 ELKCALSSKLMASVERAEIDLAIVTGMPAFKVGELVAQEELVWVASERSSVHLENPVPLA 184 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 +L + FRD LA L WRL+ ++ ++ ++AAV +G+ V+ + P +R+L Sbjct: 185 MLPPGNIFRDFGLAALESIGRIWRLSCISESISGIQAAVFSGIAVSVVGKSSVLPGMRIL 244 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMS 297 D P LP + +L S+N A+ + + + +P + Sbjct: 245 GRGDTFPALPKVDLVLYRSARSSNPAAEALASVIVRHFANSALAPAA 291 >UniRef50_A3YH31 Transcriptional regulator, LysR family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YH31_9GAMM Length = 287 Score = 280 bits (717), Expect = 4e-74, Method: Composition-based stats. Identities = 79/279 (28%), Positives = 137/279 (49%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + N+D DLLRTFVAV + N F++A+ + +TQS +SQ++ +LE ++G L R RN L Sbjct: 1 MKNIDSDLLRTFVAVYECNGFSSASECLNKTQSTISQRLLKLEDMIGCSLMQRTSRNVKL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G L YAR+IL+ + EA + L +G D+ A L +L YP Sbjct: 61 TPAGKDFLVYARQILKLHAEAIDVAKLAQKNTTLKVGVPDDYAQRFLTPVLRFFRETYPD 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 L +V + + + E E+D+ ++ + + P W + +Y++Q E I Sbjct: 121 LIPEVVCETSVRLIEKTMHGELDMALSIKHDNTIPGEFVCNEPLIWAASPDYLVQGREVI 180 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL + + FR + L K +PWR+A+ + + + +V +G VT ++ + Sbjct: 181 PLSVYPEGCIFRSNGIGALAKHSLPWRVAFTSQSPSGISVSVNSGDSVTITSKRLLPDNW 240 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 RVL+ +G P + E +L + P +N + + + Sbjct: 241 RVLTEEEGFPKIKSAELMLYHSPVFDNPFSSCFEEKLLE 279 >UniRef50_B7L193 Transcriptional regulator, LysR family n=3 Tax=Rhizobiales RepID=B7L193_METC4 Length = 293 Score = 279 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 95/291 (32%), Positives = 150/291 (51%), Gaps = 1/291 (0%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + +LDL LLRTFVA+ D +A AV RTQSAV+ Q+ RLE +G+ +F R L Sbjct: 1 MSDLDLALLRTFVAIVDTGGVTSAGRAVGRTQSAVTHQIGRLEAQLGRPVFGPDRRRITL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G LL YAR +LR ++EA + + G +T+G D A +LP +L R S YP+ Sbjct: 61 TADGEILLEYARAMLRLSEEARARFAVPGVAGRVTLGTPDLYAAYLLPEVLGRFSRAYPE 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + + + +R+ Y+ L ++D+ + T +P + +RT P W + +PI Sbjct: 121 IEIQLHCRRSVYLHAELMRDKLDIAILTEQPDLHRGEAVRTEPLSWVAGRGGRPETDDPI 180 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL +L S +R L L A W + V+ T+ ++AAV A L V+ P MS + Sbjct: 181 PLAVLPAGSVYRQRALEALGAAGRRWTIRSVSDTIAGLQAAVFARLAVSVFPHCAMSGGM 240 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM-ESYHNPWQYSPMS 297 R L DG+P LP+ + +L P+ ++ A+ + + N + P+ Sbjct: 241 RRLGEEDGMPRLPNIDLVLVRRPTGISDAAEHLAHYISRELRNAAAFRPVR 291 >UniRef50_A3Y8R3 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y8R3_9GAMM Length = 288 Score = 279 bits (715), Expect = 9e-74, Method: Composition-based stats. Identities = 76/279 (27%), Positives = 135/279 (48%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + LD++ L TFV + D AA A+ RTQ+AVS Q+++LE++ GK L R L Sbjct: 1 MKRLDINQLATFVTIVDAGNITKAAIALHRTQAAVSIQLKKLEEVAGKSLLNRGYNQFTL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G LL YARKIL ++EA + + +L+GV+ G D A + L + +PK Sbjct: 61 TREGEVLLSYARKILSLSEEALNLINDDDLEGVVRFGIPDGYARAFIQRPLRQFIDRFPK 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + + ++ + + + L + E+DL++ TH P A +R W A + L +P+ Sbjct: 121 VKIQIKNDNSHNLYKSLHAGELDLILVTHDPLASGGDLIRREKICWVKAKDLTLDMNKPL 180 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL L + +R ++ LN ++ W +++ + A+ GL ++A ++ + Sbjct: 181 PLALYEQGCSYRKGIIDALNHVELDWFVSFECQGVTGFDIAISNGLAISALAESLVKDEW 240 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 ++ LP L + E L P ++ + Q + Sbjct: 241 SIIKPASNLPDLGEVEIALHTRPGEIDDAIRCFSQVLVE 279 >UniRef50_Q7W0I5 Probable LysR-family transcriptional regulator n=4 Tax=Proteobacteria RepID=Q7W0I5_BORPE Length = 306 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 85/286 (29%), Positives = 134/286 (46%), Gaps = 3/286 (1%) Query: 12 DLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHG 71 DLDLL +FV+V D F A V RTQS VSQQ+++LE +G LF R GR LTE G Sbjct: 24 DLDLLHSFVSVVDAGGFTRAGERVHRTQSTVSQQIRKLEDALGCALFIREGRGVRLTEDG 83 Query: 72 IQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALD 131 +LLGYAR++L ++E + V+ +G D+ A T L ++ + +P++ L Sbjct: 84 ERLLGYARRMLALSNEIREVVSGERRLEVVRLGLPDDLAVTRLTHMVADFARRHPQVRLS 143 Query: 132 VRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLVL 191 +R +A + E+DL++ P A + HW CAA +PI LV Sbjct: 144 MRCDLSANLHRAQARGELDLVLLKREPGAGPSRAAWPERLHWLCAAGGPATLPDPIALVA 203 Query: 192 LDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLS 251 +R+ + L A WR+AY + L ++AAV+ GLGV +P + Sbjct: 204 FPQGCQYRNRAIHALESAGRRWRIAYESPNLSGLQAAVEGGLGVALLEQRCQTPAMARCD 263 Query: 252 GVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMS 297 + LP +E LC + + + + + + + + Sbjct: 264 AL--LPRPAPSELALCMSD-TGSRAVHELARLIMDFCGDDKLRQAA 306 >UniRef50_P16931 HTH-type transcriptional regulator dgdR n=16 Tax=Proteobacteria RepID=DGDR_BURCE Length = 294 Score = 278 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 91/286 (31%), Positives = 146/286 (51%) Query: 3 SANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHG 62 AN +L++DLLR+FV +A++ + AAA V RTQSA+SQQM+RLE +V + LF R G Sbjct: 6 GANTLGRSLEIDLLRSFVVIAEVRALSRAAARVGRTQSALSQQMKRLEDIVDQPLFQRTG 65 Query: 63 RNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVS 122 R +LT G +LL +A++ILR +DEA + L + L G + G D+ A+ LP LL + S Sbjct: 66 RGVVLTHPGERLLVHAQRILRQHDEAMADLCGTGLTGTIRFGCPDDYAEVFLPPLLRQFS 125 Query: 123 SVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQ 182 S +P+ +++ + E LE + VDL + + +R W Sbjct: 126 SQHPQAIVEIVCGPTPRLLEQLEKRAVDLAMISLPDDGANDDIIRREQLVWIGYPGLEPA 185 Query: 183 KGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEM 242 +P+PL L D + L++A +R+AY +S+L + A V++G Sbjct: 186 HFDPLPLALSDPDTLDHIAACDALHRAGRDYRVAYASSSLAGLIALVRSGQAFAVMTQTA 245 Query: 243 MSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYH 288 + DL +++G LPPLP L +D + L + + + Sbjct: 246 VPADLAIVNGDPRLPPLPAVGITLKFDRKRPSHLTAAFAEHIRAVL 291 >UniRef50_C6BUP0 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BUP0_DESAD Length = 296 Score = 277 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 83/274 (30%), Positives = 136/274 (49%), Gaps = 3/274 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 L DLLR+FV AD +F A V +TQ+AVS Q+++LE+ + LF R GR LT Sbjct: 18 LTPDLLRSFVVAADTGSFTRTAGLVHKTQAAVSMQIKKLEEDLQCLLFKRDGRGVTLTVE 77 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L Y+ KIL+ +DEA +++ L G + +GA D+ A LP +L + +P++ + Sbjct: 78 GEILYRYSSKILKLHDEALTAVSAPTLHGKIRLGAPDDYAMKHLPGILREFAVNHPQVQI 137 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 DV +++ML++ ++DL++ T + + L W + E +PL Sbjct: 138 DVFCDDTPTLSKMLKNGQLDLVIATDKVKTKYSAPL---ELTWILPQRMDPSEVEELPLA 194 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 L +R+ L LNK +R+AY + +L + AAV+ GL + + + R Sbjct: 195 LFHPVCCYRENGLKALNKIGRKYRIAYGSPSLAGLLAAVQGGLAIAVVTKDTTANGCRHA 254 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 DGLPP+ L + P +E+ V + Sbjct: 255 IPSDGLPPIESIYIDLRFQPGIRSEVISVFGGFI 288 >UniRef50_A9WT18 Transcriptional regulator, LysR family n=8 Tax=Actinobacteria (class) RepID=A9WT18_RENSM Length = 290 Score = 276 bits (708), Expect = 5e-73, Method: Composition-based stats. Identities = 76/275 (27%), Positives = 136/275 (49%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 D D LR+F+AVA+ F AA + +Q +SQ +++LE G++L R R LT++ Sbjct: 7 FDNDQLRSFLAVAETLNFTRAAERLGLSQPTISQHIRKLEDAAGRQLVLRDTREVRLTDN 66 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G + +AR IL D+A + ++G L G +D+ A T LP +L +YP++ L Sbjct: 67 GDAMAWFARNILAAQDDAARYFSGAAMRGRLRFGTADDLAYTRLPTILRDFRQLYPQINL 126 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 D+ V ++ + +++ ++DL+ A + +R W L G P+PL+ Sbjct: 127 DLTVSQSDQLYRRVKAGQLDLVFVKLVSGAQEGTVVRPDHFSWVGLEGTQLIPGAPVPLI 186 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 PS R + + L WR+ + V AAV+A +G+T P ++ DL + Sbjct: 187 TYPTPSLSRSLAIDALESTGRTWRITCNTKEINGVIAAVRARIGITVMPSTLIPDDLVSI 246 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 + LPP+ + ++ L +P + ++ + QA+ Sbjct: 247 TRRFDLPPVGEVDFTLVRNPLARTDVVDALEQAIM 281 >UniRef50_C5BWR0 Transcriptional regulator, LysR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BWR0_BEUC1 Length = 295 Score = 276 bits (706), Expect = 9e-73, Method: Composition-based stats. Identities = 92/293 (31%), Positives = 145/293 (49%), Gaps = 3/293 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 D LRTF+AVA +F AAA + +Q +VSQ ++RLE+ G++L R R LT++ Sbjct: 2 FDPTHLRTFLAVARTLSFTQAAAQLGISQPSVSQHVRRLEEAAGRQLLVRDTRAVSLTDN 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G + G+AR IL +DEA S + ++G L GA+D+ A LP +L +P++ L Sbjct: 62 GEAMAGFARSILAAHDEAASYFTGTAMRGRLRFGAADDLAIAQLPGVLRTFRQRHPQINL 121 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 ++ V + A + L + ++DL+ P +R W L P+PL+ Sbjct: 122 ELTVTQTAALQRRLAANQLDLVFVKEPPGETSGRVVRRDRLVWIGLPGTRLPDDAPLPLI 181 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 PS + + L +A WR+ + V AAV+AG+G+ P ++ D++VL Sbjct: 182 TYAAPSLSKTTAVRALAEAGRTWRITCKTLEVNGVLAAVRAGIGIAVYPASLVPDDVQVL 241 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPEGDD 303 G GLP L D + L +P S E + + A+ P S +AP DD Sbjct: 242 PGTLGLPELGDIDITLVANPRSPKEPIEALTAAILRQPFP---STTAAPSDDD 291 >UniRef50_C5B683 Transcriptional regulator, LysR family n=6 Tax=Methylobacterium RepID=C5B683_METEA Length = 300 Score = 275 bits (704), Expect = 1e-72, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 148/290 (51%), Gaps = 1/290 (0%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +L+LDLLR FVAVA+ +F AAA V R+QSAVSQ++ RLE+++G+ +F R R LT Sbjct: 12 PDLELDLLRAFVAVAETGSFTAAADVVHRSQSAVSQKVLRLEEILGRRVFDRTSRTLGLT 71 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G +LL AR++L FND + G L +G S++ LP LL R +YP + Sbjct: 72 PDGERLLVAARQMLEFNDRVMRAWREPPTSGTLRLGVSEDFIPGQLPKLLARFGRLYPDV 131 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 +D+ + + E ++ +D ++ S + + P W +++Y L P Sbjct: 132 HIDLMTGLSCNLLEAYDADRLDAVIAKRSGSNLRGRVIWREPLVWLASSDYELDFTRPAR 191 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 LV+L P +R++++A L+ W A AS+L V+AAV GLGVT + ++ Sbjct: 192 LVMLAPPCSYRELMIAALDSVRREWVAACTASSLMGVQAAVAGGLGVTLLGRSFVQEGMQ 251 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSA 298 +L + P LP TE + + + + L + + + ++A Sbjct: 252 ILRAPELWPALPMTEVTVLGEDRAPD-LVEPLIAFLSQSLAGHDALAIAA 300 >UniRef50_B1J9W8 Transcriptional regulator, LysR family n=38 Tax=Bacteria RepID=B1J9W8_PSEPW Length = 307 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 83/278 (29%), Positives = 148/278 (53%), Gaps = 3/278 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 DLDLLR V VAD +F AAA + TQS +SQ+++RLE +VG L R R+ L T+ Sbjct: 26 FDLDLLRAIVVVADCGSFTTAAARLHSTQSTISQKVRRLEDMVGHRLLVRGNRDVLPTDA 85 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LLGYAR +L ND+ +L + + + +G ++ L+ S ++P++ L Sbjct: 86 GQTLLGYARHMLALNDQMLEALAGAMVGVTVRLGVPEDFVGGRTTNALSAFSRLHPQVKL 145 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 +V +++ ++ E+DL++ R ++ + + W +A + +PIPLV Sbjct: 146 EVTSGLCRDLSQAYDNGELDLVLLKQRRNSREGVACWPERLQWIDSARMPSFELDPIPLV 205 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 +RD ++ + WR+++ +S+L ++AAV G+G++ P +P+ RVL Sbjct: 206 TFPPRGLYRDDMITAIEGMGRRWRISFTSSSLSGIQAAVADGMGISLLPPRAATPEHRVL 265 Query: 251 SGVDGLPPLPDTEYLLCYDPSSN---NELAQVIYQAME 285 GLP + E ++ + P+++ LA+V+ Q +E Sbjct: 266 GRQHGLPEVDSYEIVIVHRPTADVMVTALAKVMSQVLE 303 >UniRef50_Q1QUX8 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QUX8_CHRSD Length = 294 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 83/275 (30%), Positives = 132/275 (48%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D DLLR FV VA+ F+AA + RTQSAVS Q++RLE +G+ LF R R+ +LT Sbjct: 1 MDTDLLRAFVTVAECEGFSAAGKVLHRTQSAVSLQIKRLEDQMGESLFERTSRSVVLTPP 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LL YAR IL+ DEA + ++ +G S+E A T LP LL R ++ +P++ L Sbjct: 61 GGRLLPYARHILKLQDEARRVMGVDRQGELIRLGTSEEQASTYLPELLPRFAARFPEVRL 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 +V + + + +D+ + L P W A + + E +PL Sbjct: 121 EVSCSISGSLVHDFQEGLLDVALVVRHGPTQTGRLLGREPMVWVVAEDRAIDDWEILPLA 180 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 L + FR A L + W + Y + + + V+AGL T + + R++ Sbjct: 181 LNPEGCIFRAHAFAALGPTERRWDVRYSSRSPTGINLPVQAGLAATVKTPRSVPEGCRIV 240 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 +GLPPL E + P +++ +E Sbjct: 241 GEEEGLPPLGHVEIEMHRTPGHSSDAFVAFCDELE 275 >UniRef50_B2IEY6 Transcriptional regulator, LysR family n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IEY6_BEII9 Length = 316 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 92/288 (31%), Positives = 142/288 (49%) Query: 7 PIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKL 66 + NLD+DLLRT ++L AA + R+ SA+S QM +LE+ VGK LF + GR Sbjct: 2 RLTNLDMDLLRTLSVASELGGLGRAAERLGRSPSAISLQMHKLEEQVGKTLFRKQGRGIS 61 Query: 67 LTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYP 126 LT+ G LLGYAR+IL NDEA ++ ++G++ +G + LP +L R S YP Sbjct: 62 LTDAGDLLLGYARRILALNDEALAATRGVGVEGIVRLGVPFDLTSEWLPKVLARFSEAYP 121 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEP 186 ++ +++R R+ + ++ +DL + A + P W + + L K + Sbjct: 122 RVHIELRTDRSVELLQLYNQDLLDLTLAFGPVERPGASFVAEVPVRWIGSTGFRLDKNQD 181 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +PL+LLD P FR + L++ WRLA+ + +L + AA +AGLG+T R M Sbjct: 182 VPLILLDPPCWFRQTGIDALDRHQTAWRLAFTSPSLAGLWAATEAGLGITVRTPLGMPRS 241 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYS 294 L L GLP LP +L L + + S Sbjct: 242 LSALDPDHGLPDLPRVSIVLYNSARRYPHLTSFLETILVETLESALPS 289 >UniRef50_Q1YP17 Transcriptional regulator, LysR family protein n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=Q1YP17_9GAMM Length = 284 Score = 273 bits (700), Expect = 5e-72, Method: Composition-based stats. Identities = 86/284 (30%), Positives = 150/284 (52%), Gaps = 2/284 (0%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + NL +DLLR FV+VA L++F A + R+Q A+S QMQRLE+LV ++L R+GRN L Sbjct: 1 MKNLPMDLLRAFVSVAQLSSFTKAGELLGRSQPAISLQMQRLEELVDEQLLQRNGRNLEL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 TE G L GYA +IL ND A S L S ++G + +G E A ++P +++R + YP Sbjct: 61 TEAGENLYGYANQILSLNDLAISQLSKSTVEGKIRLGIPSEFATVLMPRIVSRFAKAYPN 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHR-PSAFKALNLRTSPTHWYCAAEYILQKGEP 186 + L+V + + + DL++ PS+ + ++T W +A+ L K + Sbjct: 121 VTLEVNCELSKSLLSKSGKASHDLILALEDNPSSTNSNLVKTDELVWVSSADKPLLKTDV 180 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +PL++ +R+ + TL++A+ W++ Y L ++ A++ GLGVT + + Sbjct: 181 VPLIVAAQGCIYRNRAIRTLDQANQSWQVVYTIPDLTGIQYAIQEGLGVTVLAKSTVPEN 240 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPS-SNNELAQVIYQAMESYHN 289 L++L P L + L N+ ++ + +++ Sbjct: 241 LKILPPSARFPALGEVGISLISSARNRKNQAVHLLIEFLQTSLA 284 >UniRef50_B1YYS6 Transcriptional regulator, LysR family n=41 Tax=Burkholderiaceae RepID=B1YYS6_BURA4 Length = 291 Score = 273 bits (699), Expect = 6e-72, Method: Composition-based stats. Identities = 87/292 (29%), Positives = 143/292 (48%), Gaps = 2/292 (0%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + LD D+L T VAVA+ AA AV R+QSAVS Q++ LE +G+ LF R R+ +L Sbjct: 1 MKMLDHDVLATVVAVAETGNMTRAAEAVNRSQSAVSMQIKSLEDAIGRPLFVRKPRSIVL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G LLG+AR++L DEA ++++ + G + IG D+ A ++LP +L + S+ YPK Sbjct: 61 TREGEVLLGFARRMLALRDEAWAAVVRPEVTGKVVIGVPDDYASSLLPSVLKKFSATYPK 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYI-LQKGEP 186 + + V ++ +A +L+ VDL+ T +R P W + + P Sbjct: 121 VEIQVIGLPSSALAPLLKEGTVDLVCGTR-IKGLSGDFIRHEPMAWAAMTNGPRVWEERP 179 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +P+ + S R+ + +L +A +P+R +Y + +L + + V+AGL V + Sbjct: 180 LPIAVFMPGSVARENAIRSLERAKLPFRTSYESPSLLGLLSMVEAGLAVAPLARCAIPAQ 239 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSA 298 L +L GLP LP E +L S + + A Sbjct: 240 LSMLGRSHGLPDLPPLELILARSTKSKRPPCDFLADQLMEDLQRQTGQAGDA 291 >UniRef50_B8H5P5 Transcriptional regulator, LysR family protein n=4 Tax=Alphaproteobacteria RepID=B8H5P5_CAUCN Length = 301 Score = 273 bits (699), Expect = 7e-72, Method: Composition-based stats. Identities = 88/296 (29%), Positives = 141/296 (47%), Gaps = 3/296 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 NLDLDL+R F+ V + +F A + R+QSAVS Q++RLE+ +G+ L +R R+ T Sbjct: 5 TNLDLDLVRAFLVVCEQRSFTRAGERLGRSQSAVSLQVRRLEEQLGQPLLSRDPRHVAPT 64 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 E G L AR++LR NDE + L +++G + +GA ++ A LP +L + +P++ Sbjct: 65 EQGAAFLPQARRLLRLNDEILAGLGADDIEGEVRLGAPEDFATQHLPAVLGSFARSHPRI 124 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFK-ALNLRTSPTHWYCAAEYILQKGEPI 187 AL V + + L +DL + P + + P W + ++ P+ Sbjct: 125 ALTVTCDLTLNLLDRLSEGALDLALVKREPLGPDLGVRVWREPLVWVALDPELARRDGPV 184 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PLV P +R +A L A WR Y + +L AA++ GLG++ P EM DL Sbjct: 185 PLVAAPAPCVYRKRAVAALEAAGRGWRATYTSPSLAGQLAALRGGLGLSVLPREMAPDDL 244 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPEGDD 303 +L D LP L D E L + A+ + + S + + A Sbjct: 245 TIL--SDDLPRLEDAEIALLKARGTPPPAAERLADHILSALDRQRSQAGGASPSKA 298 >UniRef50_A3VR51 Probable transcriptional regulator n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VR51_9PROT Length = 307 Score = 273 bits (699), Expect = 7e-72, Method: Composition-based stats. Identities = 93/301 (30%), Positives = 143/301 (47%), Gaps = 5/301 (1%) Query: 2 ISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARH 61 ++ N PI +LD LLR FV++ D TFA AAA + RTQSA+S Q++RLE +V LF R+ Sbjct: 1 MNRNAPIRDLDPSLLRAFVSIVDAGTFARAAARLNRTQSALSMQVKRLEDVVDATLFDRN 60 Query: 62 GRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRV 121 R LT G +LL YAR+I+ ND A SL L G + +G ++ A LP +L++ Sbjct: 61 NRPPTLTIAGEKLLAYAREIVAVNDAALESLRSDKLSGRVRLGLMEDFATFHLPPMLSKF 120 Query: 122 SSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYIL 181 ++P + ++V + + EM+ + D ++ + + L W A Sbjct: 121 RRLFPDVLIEVETGLTSELKEMVGA-RFDAVIVMTPENGTEGEFLYRGKPLWGGAPGVDP 179 Query: 182 QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVE 241 E +PL L FR L++A+ W +A+++ AV A V+ G V+ Sbjct: 180 VTHEVLPLALYWPGCFFRKWATEALDRAERRWHAQLIANSIGAVAAEVREGGCVSVFKDL 239 Query: 242 MMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM----ESYHNPWQYSPMS 297 L L DGLP LP+ E L PS++ A+ + S H+ P Sbjct: 240 TWPEGLCRLGCADGLPDLPNYELRLLRAPSADRGAAKAFADFLGEEVRSLHSDLDQRPAL 299 Query: 298 A 298 Sbjct: 300 T 300 >UniRef50_UPI000197C29B LysR family transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C29B Length = 291 Score = 272 bits (698), Expect = 7e-72, Method: Composition-based stats. Identities = 80/289 (27%), Positives = 140/289 (48%), Gaps = 3/289 (1%) Query: 1 MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR 60 MI + L+L LL+TFV VA+ F A+ + TQS +SQQ+QRLE LV + LF R Sbjct: 1 MIGIYKMNPLLNLVLLKTFVTVAETGNFTVASQHLNSTQSTLSQQIQRLEALVSQPLFVR 60 Query: 61 HGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNR 120 R LTE G LL YA+ IL ND + + + + +G ++ A + L Sbjct: 61 GHRILTLTETGEVLLSYAKNILALNDTFFMKITGNAVIQTIRLGFPEDLASGQVTPTLAA 120 Query: 121 VSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYI 180 P + L+V + + + + E+DL++ + FK+ P W + +Y Sbjct: 121 FMQANPNVRLEVTSGLSRQLHQRYQHGELDLIIVKQKKGEFKSDYHWPEPLCWLTSNQYK 180 Query: 181 LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 + +PLV+ + +R+ + L+ PW + Y S+L +++A+ GLGV+ P+ Sbjct: 181 RLSNDSVPLVVFPENGLYRNDMFKLLDSEQRPWHITYTCSSLAGIQSAIADGLGVSLLPL 240 Query: 241 EMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSN---NELAQVIYQAMES 286 P R+L+ +G P + E + + +++ +LA+ + Q + Sbjct: 241 RAKLPQHRILTEEEGFPAAQEMEIAMHFHANTSDIITQLAEKLAQQLGE 289 >UniRef50_C0Z518 Transcriptional regulator n=3 Tax=Paenibacillaceae RepID=C0Z518_BREBN Length = 295 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 74/293 (25%), Positives = 117/293 (39%), Gaps = 15/293 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L TF VA +F AA + Q V+ QMQ+LEQ G LF R+GR LT+ Sbjct: 1 MELVYLHTFREVARYGSFTRAAEELGYAQPTVTAQMQKLEQSYGAPLFERYGRKLRLTQA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LL YAR+++R E+ + G + IG D A LP L YP++ L Sbjct: 61 GEALLPYARELIRLYGESKEVIKH-QTTGPIAIGTIDTLAAFFLPPYLQAFCQQYPQVDL 119 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRP---SAFKALNLRTSPTHWYCAAEYIL------ 181 +R A + + + +D + RP +R + Sbjct: 120 VLRTAGEAEIVQQIRDGYLDFGIIFDRPCTDPELVTHVIREEELVVVMPPAHRFTTATAL 179 Query: 182 --QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARP 239 PLVL ++ +R M+L +A + R+A S A++ V+ GLGV P Sbjct: 180 TVHDLGGEPLVLTEEGCTYRGMLLEAFGEAGMTQRIACQFSNPEAIKQCVRCGLGVALLP 239 Query: 240 VEMMSPDLR--VLSGVDGLPPLPDTEY-LLCYDPSSNNELAQVIYQAMESYHN 289 V + +L VL+ + P L+ + + + + Sbjct: 240 VMAVQRELAEGVLTAIPFQSDKPPFSIQLVYHKKKWLSPSMVTLVDTITRSQR 292 >UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AG49_CARHZ Length = 297 Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 114/297 (38%), Gaps = 18/297 (6%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++ + L F VA+ +F+ AA + +Q A+S +Q LE+ G +L R + LT Sbjct: 1 MNRNQLEIFRVVAEKKSFSEAARLLHISQPAISMHIQALEEYYGTKLLDRTTKRVTLTPA 60 Query: 71 GIQLLGYARKILRFNDEACSSL--MFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L Y +L D+A + ++G L +GAS +LP LL+ YP + Sbjct: 61 GEILYKYTLHLLSLMDKAQRDISQAAGIIKGKLILGASLTIGGHVLPPLLSSFYRKYPDV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRP--SAFKALNLRTSPTHWYCAAEYILQ---- 182 + + + + E + +DL L AA + L Sbjct: 121 NITMEIMNTEKVLERVSDLTLDLGFVEGEVTTGELHVEALARDELVVVVAANHPLAGRGR 180 Query: 183 ----KGEPIPLVLLDDPSPFRDMVLATLNKADI---PWRLAYVASTLPAVRAAVKAGLGV 235 + +PLV+ + S R ++ L A ++ + A++ AV+AGLG Sbjct: 181 ISWEELATLPLVMREPGSGTRKVIEERLQAAGFKLPELKIVMELGSTEAIKGAVEAGLGA 240 Query: 236 TARPVEMMSPDLRVLSGVDGL---PPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 + ++ L P+ Y++ + ++ Q + Q + + Sbjct: 241 AILSKWTVRREINWGIFKQLLIENLPIYREFYVVLNNNKFHSPATQALIQFCREHLS 297 >UniRef50_Q0FXE0 Probable transcriptional regulator n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FXE0_9RHIZ Length = 302 Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 96/293 (32%), Positives = 151/293 (51%), Gaps = 4/293 (1%) Query: 3 SANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHG 62 ++ + LD+DLLRTFVA+ D +FAAAA V R+ SA+S Q++RLE G EL R Sbjct: 8 QSSAVMPLLDIDLLRTFVAIIDEGSFAAAANKVGRSPSAISMQVKRLEDTTGTELLRRDA 67 Query: 63 RNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVS 122 R+ LT G LLG+AR+ + N A +L L+G L +G D+ +T+LP +L R S Sbjct: 68 RSVRLTAEGETLLGFARQFMDLNRRAIGALGRPELEGQLHLGLPDDYGETVLPSMLRRFS 127 Query: 123 SVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSA---FKALNLRTSPTHWYCAAEY 179 YP + +DV ++ + + ++D+ V + A L T W A Sbjct: 128 ESYPSVVVDVTMQNTRETLALFDRGKLDVAVFSFDEDGGNAVGAECLFTDALVWVGAPGG 187 Query: 180 ILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARP 239 +P+PL + D+ +R LA L + + PWR+AY + P RAAV+AG+ + Sbjct: 188 TAHLHDPLPLAMWDESCVWRRSALAALERVERPWRVAYTCAHTPGQRAAVRAGIAIAPVS 247 Query: 240 VEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQ 292 D+R+L DGLPP+ D + + +E A+VI + ++ + + Sbjct: 248 RIFAGDDVRILGEADGLPPMNDYSIGMKLREN-PSEQAKVIAHHLRTFFSTLR 299 >UniRef50_Q13P59 Transcriptional regulator, LysR family n=8 Tax=Proteobacteria RepID=Q13P59_BURXL Length = 296 Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 90/277 (32%), Positives = 149/277 (53%), Gaps = 2/277 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 D+DLLRTFVAV + +F A+A V R+Q+AVS Q++RLE ++G LFAR+ RN LT Sbjct: 5 FDVDLLRTFVAVVETGSFTKASATVHRSQAAVSMQIKRLETMLGTTLFARNTRNLSLTRP 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LL YAR++L ++EA S+++ + G + +GA D+ ++L +L R S++YP + + Sbjct: 65 GNTLLEYARRVLALHEEAWSAIVRPEVTGRVVLGAPDDYVSSLLSPVLRRFSNLYPHVEI 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAA-EYILQKGEPIPL 189 ++ ++ +A ML ++DL T + +R+ P W A+ + + P+P+ Sbjct: 125 EIVCAQSTSLAPMLADNKIDLAFVTR-DRKLRGEFVRSEPMVWVGASLDTPVLAASPLPV 183 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 L + R LA L+ A I +R A+ +++L + A V AGL V A + P L + Sbjct: 184 GLYEPGCVARQHTLAALDGARIRYRAAFSSASLMGLVATVDAGLSVIALTRCSVPPRLTI 243 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 L GLP + E ++ S+ + M Sbjct: 244 LGEAQGLPKIAPLEIVVARSAKSDRPTCDYLAAQMMQ 280 >UniRef50_B2Q7A1 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q7A1_PROST Length = 289 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 74/291 (25%), Positives = 134/291 (46%), Gaps = 2/291 (0%) Query: 1 MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR 60 M + L+ LL+TF+ VA+ F A+ + TQS +SQQ+QRLE LVG+ LF R Sbjct: 1 MSGIYKMNTLLNFILLKTFITVAETGNFTVASQHLNSTQSTLSQQIQRLEALVGQPLFIR 60 Query: 61 HGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNR 120 R LTE G L YA+KI+ ND + + + L +G ++ A + L Sbjct: 61 GHRMLTLTETGEVLFSYAKKIIALNDMFFMKITGNAVIQTLRLGFPEDFASGQVTPTLAA 120 Query: 121 VSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYI 180 +P + L+V + + + + +DL++ R FK+ P W + Sbjct: 121 FMHEHPNIRLEVTSGLSRQLYQHYQQGALDLIIVKQRKGEFKSDYRWPEPLCWLTSTNNE 180 Query: 181 LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 + +PL++ + +R+ + L+ PW + Y S+L +++A+ GLG++ P+ Sbjct: 181 YLNADSLPLIVFPENGLYRNDMFRLLDIEQRPWHITYTCSSLAGIQSAIADGLGISLLPL 240 Query: 241 EMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPW 291 P R+L+ +G P + E + S ++ +V+ + + Sbjct: 241 RAKLPQHRILTEQEGFPAAEEMEIAMHVHDS--SDAIKVLAERLARQLEQL 289 >UniRef50_A6UCU7 Transcriptional regulator, LysR family n=12 Tax=Rhizobiales RepID=A6UCU7_SINMW Length = 326 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 83/302 (27%), Positives = 144/302 (47%), Gaps = 2/302 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD DLLRTF+AVAD AA V RTQSAVS Q+++LE+L+G LF RH R +LT+ Sbjct: 16 LDSDLLRTFLAVADTGNVTRAADIVRRTQSAVSMQIRKLEELIGSALFERHSRGVILTDE 75 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +L+ AR+I+ D+ +++ L G + IG S+E ++ LP L ++++P + + Sbjct: 76 GRRLVDNARRIVTLLDDTAAAMRSPALDGSVRIGISEEYINSTLPKALGAFAAIHPGVEV 135 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 VR + L + E+D+ V ++ L +PT W ++ + +P+P+ Sbjct: 136 TVRQDTSMSNTAALAAGEIDIAVVFEPGGRTRSEVLMVNPTVWVTCDQHGAHQRQPLPIA 195 Query: 191 --LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 + D+ L +L + R+AYV+ T + AAV +GL + + R Sbjct: 196 TYTYAEGGWCDDLALRSLKARGLECRIAYVSRTSGGLIAAVLSGLAIAPLSRSSIPAGCR 255 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPEGDDSLLIE 308 L+ DG + + +L + + + A+ + E +++ Sbjct: 256 ELTEEDGFGIIDMSNVVLRTRRENRSPTVNAMADAIRRAFRAPARLEGAEQEKEEARSTT 315 Query: 309 RD 310 D Sbjct: 316 TD 317 >UniRef50_C1SL97 Transcriptional regulator, COG0583 n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SL97_9BACT Length = 281 Score = 270 bits (691), Expect = 5e-71, Method: Composition-based stats. Identities = 87/282 (30%), Positives = 145/282 (51%), Gaps = 4/282 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 ++L ++LL+TF+ V + F AA + +TQSAVS QM+RL + VG+ LF R G+ LT Sbjct: 1 MDLSIELLKTFIVVVEEMNFTRAAERLYKTQSAVSLQMKRLSEEVGEPLFCRKGKTLALT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 E G +L YA +IL+ ++EAC L S + G +T+G SDE I +L + YP + Sbjct: 61 EKGEKLRMYAVRILKSHEEACIGLSGSGVAGNITLGISDEYTPIIFTKILAGFAERYPNV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 ++ V K + + + ++ +D+ + S+ L LR P W + Y G + Sbjct: 121 SVGVVCKPSPELKKRVDENLLDIAILAEYESS--GLLLRYEPMMWMASRTY-AYDGGVVQ 177 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL- 247 L + D R+ + L KA +P+R+AY + +R+AVK+G+ V+ + D Sbjct: 178 LAVYPDYCIARNTGIEYLAKAGVPYRIAYETESSRLLRSAVKSGMAVSPVLSRVYRDDHY 237 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 R L +G P LP L N+E+A+ + + ++ Sbjct: 238 RQLGSEEGFPELPHIPVTLHRSKDRNDEVAEYLLEHIKKVFR 279 >UniRef50_UPI0001AEBA54 LysR family transcriptional regulator n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEBA54 Length = 285 Score = 270 bits (691), Expect = 6e-71, Method: Composition-based stats. Identities = 67/278 (24%), Positives = 134/278 (48%), Gaps = 1/278 (0%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + NL +D LR+FV +A ++ A + RTQ A+S Q+++LE+++G++LF+R L Sbjct: 1 MKNLSIDFLRSFVLIAQTGSYTQCAEQLQRTQPAISLQIKKLEEMIGEKLFSRDKNRLAL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G +LL Y KI+ ND+A + + G + +G E + T++P ++ R + YP+ Sbjct: 61 TGAGSRLLSYGEKIVALNDQAMAEFGKPQVTGNIRLGIPSEFSTTLMPKIIRRFTQTYPE 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKAL-NLRTSPTHWYCAAEYILQKGEP 186 ++L+V + + + DL+++ + + + W + ++ Sbjct: 121 ISLEVHCALSKDLISEPLKSQFDLILSLQETPDPQQDGYIISDQLVWVGSQRFVNSVPAK 180 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +P++ P +R L+ PW++ Y + L ++ A+ GLG+T + P Sbjct: 181 LPIIAAPSPCIYRKRATNLLSAIKKPWQVVYTIADLNGIQTAINEGLGITVLAKSSVPPG 240 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 L VLS + LP L L +++ ++ + + Sbjct: 241 LHVLSNSESLPELGHVGVCLVNPQKVSSKAISLLTETI 278 >UniRef50_A1WQD6 Transcriptional regulator, LysR family n=12 Tax=cellular organisms RepID=A1WQD6_VEREI Length = 292 Score = 269 bits (689), Expect = 9e-71, Method: Composition-based stats. Identities = 121/284 (42%), Positives = 175/284 (61%), Gaps = 2/284 (0%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + LDL+LLR+F AV ++FAAAA + RTQSA++QQMQRL++ +G LF + GR K L Sbjct: 1 MPTLDLELLRSFAAVVSHHSFAAAAVHLGRTQSAITQQMQRLQEQIGHPLFVKQGRQKRL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 TE G +LL YAR +L NDEA +L +G L IGA + A+T+LP LL V+ P Sbjct: 61 TERGERLLNYARHMLALNDEALRNLRQGRFEGNLRIGAPHDVAETLLPSLLAEVARTAPL 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVT--THRPSAFKALNLRTSPTHWYCAAEYILQKGE 185 L LD+ + R+ Y+ LES EVD++++ S F+ + LR SPT W CAA Y+ + Sbjct: 121 LQLDIHIGRSPYLMTSLESGEVDMIISNRADPQSQFEGVVLRNSPTVWLCAASYVHDPAK 180 Query: 186 PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSP 245 P+PL++ D PS FR + L+ A + W Y++S L ++AA++AGLGVTAR VE + Sbjct: 181 PVPLIMADGPSIFRRIGHEALDAAGVAWTPRYMSSGLVGIKAALRAGLGVTARGVEQLDA 240 Query: 246 DLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 LRVL DG+P LPD Y L N + + +++ ++ + Sbjct: 241 GLRVLDASDGMPRLPDLTYYLYVRSRVVNPVTRQVFETLKQHLR 284 >UniRef50_Q28WA0 Transcriptional regulator, LysR family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28WA0_JANSC Length = 291 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 81/284 (28%), Positives = 136/284 (47%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + LD DL+R F+AV + + A + RTQSA+S Q+++LE +G+ +F R R L Sbjct: 2 LPPLDSDLMRGFLAVVETGSLTRAGHRLGRTQSAISMQIRKLEDSLGQSVFVREPRGVRL 61 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 TE G QLL YA++++ DEA +L L G + +G DE +LP +L+ S +P+ Sbjct: 62 TERGKQLLPYAQRVVGLLDEAAIALREKPLSGPVRVGVPDEYIQGVLPAVLSAFSQRHPE 121 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + +R +A E L S ++DL V S + L PT W + + P+ Sbjct: 122 TQVTLRCDFSAPQLEALNSDKIDLAVIYEGYSTDEVEVLAVDPTVWVTSISHAQHLHRPL 181 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 P+ + RD L +L + IP+ A+ T +R+AV G+ V + P Sbjct: 182 PISIYFSSDWCRDFALHSLEQIGIPYFAAFECDTSGGMRSAVSNGIAVAPLARSSIPPGC 241 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPW 291 R L+ DG + + +L +P+ ++ + + + P Sbjct: 242 RELTAEDGFMGVDNARVVLRRNPAGSSTAIEAMVATLREAFWPL 285 >UniRef50_A6WG79 Transcriptional regulator, LysR family n=2 Tax=Actinomycetales RepID=A6WG79_KINRD Length = 297 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 81/297 (27%), Positives = 139/297 (46%) Query: 1 MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR 60 M + P + LRTF+AVA ++F AAA + QS VSQ +++LE VG++L R Sbjct: 1 MTTGQGPTTTFEPVQLRTFLAVAQTHSFTQAAARLGVRQSTVSQHVRKLEDAVGRQLVHR 60 Query: 61 HGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNR 120 + LT G ++G+AR IL +++A + + G L IG SD+ A T LP +L Sbjct: 61 DTHSVTLTPDGEAMIGFARSILASHEQAAAYFTGARPVGRLRIGMSDDLALTRLPAILRD 120 Query: 121 VSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYI 180 P++ L++ V ++ + LE+ +D+ + P + + +R W + Sbjct: 121 FRGENPRVDLELTVDQSGTLHRRLENDRLDIFIGKRPPRSGEGKLVRRERLVWVGNSSTR 180 Query: 181 LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 L +P+PL + PS + L++ I +R A V + + AAV +G+GV+ Sbjct: 181 LDLSQPVPLAVYPSPSISGAAMHEALDRVGIGYRSACVCRGVNGLIAAVASGIGVSCLAS 240 Query: 241 EMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMS 297 ++ L L LP L + +L +P + + A A P +P + Sbjct: 241 SLVPVQLVALGPQHKLPELGQIDLVLLTNPRTRDRPASRALAAAVLSSGPSSLAPSA 297 >UniRef50_C6IVL6 Transcriptional regulator YwqM n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVL6_9BACL Length = 302 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 60/298 (20%), Positives = 124/298 (41%), Gaps = 15/298 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++ L TF+ V + +F AA + QS+V+ Q+Q LE +G LF R GR +LT+ Sbjct: 1 MESRHLFTFLVVVEAGSFTRAAQQLDYAQSSVTAQIQALEAEIGLPLFDRIGRKIVLTDA 60 Query: 71 GIQLLGYARKILRFNDEACSSLM-FSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL YA++I + ++ A ++L + + G L IGA + A LP ++ YP + Sbjct: 61 GRRLLPYAQEIAKIHEMAKNALHPAAEMAGSLKIGAPESLAAFRLPEVIRHYRQRYPLVQ 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHR---PSAFKALNLRTSPTHWYCAAEYIL----- 181 + ++ + + +++ S E+D+ + L P A++ L Sbjct: 121 IVLKPGQCWELRDLVRSGELDVAFLLQPEVEDRDLQIETLVHEPMALVAPADHPLRHEAE 180 Query: 182 ---QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + + ++ + +R + LN + ++ A++ V +GLGV+ Sbjct: 181 VVPDQLKDQTILHTESGCSYRTLFERYLNSHGVFPDPNLEFWSIEAIKQCVMSGLGVSFL 240 Query: 239 PVEMMSPDL---RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQY 293 P+ + +L +++ L + + + + W+ Sbjct: 241 PLVTVRSELAEGKLVKLNWNDESQRVATQLALHRKKWRSPALEQFVLMIREQAERWRE 298 >UniRef50_A8LQJ4 HTH-type transcriptional regulator n=5 Tax=Rhodobacteraceae RepID=A8LQJ4_DINSH Length = 298 Score = 267 bits (684), Expect = 4e-70, Method: Composition-based stats. Identities = 84/282 (29%), Positives = 144/282 (51%), Gaps = 1/282 (0%) Query: 6 RPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNK 65 R NL DLLRTFV V DL + + RTQ A+S Q++RLE++ GK+L A+ G+ Sbjct: 3 RKFTNLQTDLLRTFVTVVDLRNYTETGRILGRTQPAISLQIKRLEEITGKKLLAQQGKQV 62 Query: 66 LLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVY 125 LT G LLGYAR++LR ND A ++L +++ G L +G + A ++ R + Sbjct: 63 ELTPDGQTLLGYAREMLRLNDRAVANLQQASILGTLRVGLPVDYAIEYFQSIITRFAREN 122 Query: 126 PKLALDVRVKRNAYMAEMLESQEVDLMV-TTHRPSAFKALNLRTSPTHWYCAAEYILQKG 184 P + LD+R R+ + L ++D+ + T A + W CA ++ + Sbjct: 123 PAVQLDIRCNRSPDLLSALHVDDLDMTIAITDSMPAPHVSVYWSEHPVWVCARDHRIDPD 182 Query: 185 EPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMS 244 +P+ +V + +R ++ LN WR+++ + + A++ AV G+GVTA + + Sbjct: 183 QPLKVVAHPNGCFYRKRMIDALNTEGRDWRISFESLGVSALQKAVLDGMGVTALTKKTLL 242 Query: 245 PDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 P +R+LS +G P L + L Y ++ A + + + Sbjct: 243 PGMRLLSPGEGFPNLANIHVGLFYKHVKMSDAALKLIEKITE 284 >UniRef50_A3YEV8 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YEV8_9GAMM Length = 297 Score = 267 bits (683), Expect = 5e-70, Method: Composition-based stats. Identities = 78/285 (27%), Positives = 138/285 (48%), Gaps = 4/285 (1%) Query: 1 MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR 60 M + R LD DLLRTFVA+A+ AA + RTQSA+S Q+++LE +LF R Sbjct: 7 MKNIERS--QLDSDLLRTFVAIAETGNLTQAANYLNRTQSAISVQIKKLEASFSTQLFYR 64 Query: 61 HGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNR 120 R LLTE G +LL ARK++ + + L + L G + +G D+ IL L Sbjct: 65 QPRGMLLTEDGHRLLPEARKLIAEVNRI-AGLFTNKLSGRVALGVPDDCGLVILESGLRH 123 Query: 121 VSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYI 180 + P + + VR ++ + +++ E+DL + P L + W Sbjct: 124 FLANNPDVEVSVRCSLSSQFPQAIQAGELDLALYLASPEEDFDTILWQEESVWVAHESLQ 183 Query: 181 LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 L + +PL + D +R++ + L + + P+++ + + ++ ++ AV AG+ V + Sbjct: 184 LMPDQVVPLAVYDRDCWWREVAIDALEEVNRPYQMTFSSESIAGIKTAVNAGVAVAMLSI 243 Query: 241 EMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 + P +++L+ DG P LP + L S +EL + ++ Sbjct: 244 NSVEPHMKILTKADGFPSLPPSSMALLRH-SQQSELCNAMEDSIR 287 >UniRef50_C3BJ72 YwqM (Probable transcriptional regulator YwqM) n=4 Tax=Bacillus RepID=C3BJ72_9BACI Length = 298 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 126/297 (42%), Gaps = 19/297 (6%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L+TF+ VA+ F A + TQS ++ ++ LE+ +G LF R G+ +LT+ Sbjct: 1 MELRHLKTFIIVAESGGFTRAGEQLGYTQSTITNHIRSLEEEIGNPLFDRLGKKVILTDV 60 Query: 71 GIQLLGYARKILRFNDEACSSLM-FSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +L YA KIL ++EA S G + IGA++ LP +L YP++ Sbjct: 61 GEHMLSYAHKILELSNEALESSQMNGKFSGTIRIGANESLMIYRLPAVLYEFKRKYPQVH 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRP---SAFKALNLRTSPTHWYCAAEYIL----- 181 + ++ + + L+S + D + TH + +L ++ L Sbjct: 121 IILQPSESQELHNELKSGKFDFALFTHPEQLGTDIVTHSLVQEKIVLIAPPKHPLTKKVS 180 Query: 182 ---QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 E L+L + S +RD++ + + I + ++ A++ V GLG++ Sbjct: 181 VSPADLEGEMLLLTEPGS-YRDLLERRIKEDGINCSHIH-FWSIEAIKQTVMCGLGISYL 238 Query: 239 PVEMMSPDLRVLSGVDGLPPLPDTEYL----LCYDPSSNNELAQVIYQAMESYHNPW 291 P + ++ + LP +++ + + + + +E + W Sbjct: 239 PFITVKEEIEQ-GKLSVLPWTYSKDFVTTELAYHKSKWLTPAMKKLIEMIEKHAEKW 294 >UniRef50_Q7WCR5 Probable LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7WCR5_BORBR Length = 307 Score = 266 bits (681), Expect = 8e-70, Method: Composition-based stats. Identities = 102/282 (36%), Positives = 170/282 (60%), Gaps = 1/282 (0%) Query: 6 RPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNK 65 R + +LD+ LRT V +A +F+A A + +TQ A++ QM +LE +G LF + GR++ Sbjct: 10 RSVRHLDMQQLRTLVTIAQTGSFSATAEKLFKTQPAITHQMHQLEATLGTALFEKQGRSR 69 Query: 66 LLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVY 125 +LTE G ++L YA ++L NDE LQG L IG+ ++ +T+LP +L + S Sbjct: 70 VLTEDGQKMLKYASQVLALNDEVFRVFQER-LQGTLRIGSPHDAVETLLPSILRQASQAL 128 Query: 126 PKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGE 185 P+L +DV + R + E+L+ E+D+ ++ F+ L L+ SP W CAA+Y+ + + Sbjct: 129 PQLNIDVCIDRAPRLFELLQRGEIDMAISARFHQEFEGLILKRSPVVWLCAADYVHRPDK 188 Query: 186 PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSP 245 +PL+L D S +R+M LA L + I W + + L ++AA++AGLGVT R +++++P Sbjct: 189 ALPLILADGSSIYREMALAALEQHHIRWTVTRIVPDLVGIKAAIRAGLGVTPRSIDLLAP 248 Query: 246 DLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 D+R+L DGLPPLP+ Y L P +++ A+ Y+ + Sbjct: 249 DMRMLDEADGLPPLPEMTYHLWIRPHADDSPARQAYEMLRQA 290 >UniRef50_C3KKD9 Putative LysR family transcriptional regulator n=1 Tax=Rhizobium sp. NGR234 RepID=C3KKD9_RHISN Length = 284 Score = 266 bits (681), Expect = 8e-70, Method: Composition-based stats. Identities = 82/277 (29%), Positives = 144/277 (51%), Gaps = 1/277 (0%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHG-RNKLLT 68 +LD+DLLR F V F+ AA + R+Q A+S Q++RLE+ VG ++F R R LT Sbjct: 4 DLDIDLLRAFATVHQSGGFSQAAEILGRSQPAISLQIKRLEERVGGQVFERSAARGVPLT 63 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G+ L+ YAR+I+ +DEA + + +++ + +G +E + LP +L+ S V+P+ Sbjct: 64 PVGMTLMEYARQIIALHDEALARVTLPSIKTFVRLGILEELGNYRLPAVLHSFSKVFPEA 123 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 L V+VK + + + +D++V ++ L + W + +P+P Sbjct: 124 NLQVQVKLSNSLMIEMLQGRLDIIVIAAEAEVPNSIPLWSEQLVWVASNAVPSPMRQPMP 183 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 LV L DP +R + L+ A+ P+ +ST+ +RA+V AG+GVT ++ LR Sbjct: 184 LVTLPDPCFYRKAAIRALSAAEQPYTTVCNSSTMAGIRASVIAGIGVTVMGKTEVTEGLR 243 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 VL GLP L D + ++ + +A+ + + Sbjct: 244 VLGSDAGLPRLSDADVVIYFRDKGFESVAKALAAHVR 280 >UniRef50_C5A914 Regulatory protein n=2 Tax=Burkholderia RepID=C5A914_BURGB Length = 301 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 94/284 (33%), Positives = 143/284 (50%), Gaps = 5/284 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 NLD+D+LRTFV +L +FA AA + R+QSAVS Q++RLE+ VG+ L + GR LT Sbjct: 5 KNLDMDVLRTFVTGFELGSFARAAERLGRSQSAVSTQLRRLEEQVGQPLVRKSGRGLALT 64 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LLGYA+++L NDEA SL +++ G +G + A+ LP LL R + +PK+ Sbjct: 65 TAGESLLGYAKRLLALNDEAVESLRGADVAGWARLGLPQDFAEGWLPALLQRFARAHPKV 124 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSA-FKALNLRTSPTHWYCAAEYILQKG--- 184 ++V+V R + E E+D+ + + + + P W A + Sbjct: 125 RVEVQVDRAVPLVERTLRGELDIALVWGDAAGMPRGEKVADVPLQWIGAPGWPGVASLGP 184 Query: 185 EPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMS 244 EP+P P FR + L+ A +PWRL + + +L + AA + GLG+TAR + Sbjct: 185 EPLPFAAFAPPCGFRSAAVGALDAAGLPWRLVFTSPSLSGLWAAAEGGLGITARTAIHLP 244 Query: 245 PDLRVLSGVD-GLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 L VL GLP L LLC + + + + Sbjct: 245 KTLAVLDPAATGLPRLASIPLLLCRAEADPPPAVERLTAILLEM 288 >UniRef50_A9DC03 Transcriptional regulator, LysR family protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DC03_9RHIZ Length = 301 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 85/290 (29%), Positives = 146/290 (50%), Gaps = 3/290 (1%) Query: 3 SANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHG 62 N P+I LD D+LR+FVA+A+ +F AAAA + RT SAVS Q++RLE+ +G +F R Sbjct: 4 PVNHPLIMLDPDVLRSFVAIAETGSFTAAAARIYRTPSAVSMQIKRLEEQLGVSVFLRDA 63 Query: 63 RNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVS 122 RN LT G LLGYAR+++ N E S + S + GV+ IG+ + + +LP +L R + Sbjct: 64 RNVALTHDGEVLLGYARRLIALNRETISRFVTSEVSGVVRIGSPSDYGEAVLPGVLKRFA 123 Query: 123 SVYPKLALDVRVKRNAYMAEMLESQEVDLMVT--THRPSAFKALNLRTSPTHWYCAAEYI 180 +P + +DV + +++ + + S +D+ + ++ + T W A Sbjct: 124 KSHPSVVVDVVIDQSSSLLKRFGSGHLDIALVSCMRGSTSDAGEVVMTDDIVWAGAKGGQ 183 Query: 181 LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 +P+P+ + D+ +R+ LA L K +R+A++ S + RAA+ A L + Sbjct: 184 ACLMDPLPVSMWDEGCVWRESALAALEKVGRSYRVAFMTSHMAGQRAAILADLAIAPMGR 243 Query: 241 EMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNP 290 + PD+++L GLP + L S + + + Sbjct: 244 HFVGPDIQILDENCGLPAPGQYQLQLKV-GSDPSPQVSALSDHFRAGFER 292 >UniRef50_B2JVD1 Transcriptional regulator, LysR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JVD1_BURP8 Length = 282 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 81/281 (28%), Positives = 131/281 (46%), Gaps = 7/281 (2%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELF--ARHGRNKLLT 68 LDL+LL+T V V D +F A V RTQS VSQQ++RLE+ VG+ L R G T Sbjct: 2 LDLELLKTLVCVVDEGSFTRAGDRVHRTQSTVSQQVRRLEERVGRTLLMRDRTGNQVTAT 61 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 EHG L YAR+++ + EA +L + + IG ++ + +L+ P Sbjct: 62 EHGELLTHYARRLIALSQEAQDALASDVSRVPIRIGVPEDFCAKRMASILSGFVKARPDA 121 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAA--EYILQKGEP 186 L+ + + L E+D+ + P + +L W E ++GEP Sbjct: 122 RLETVTGMSGDLQRKLSGGEIDIALVKREPGSGPSLAAWPESLVWVRGRQVEVPSEEGEP 181 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +PL L +R + TL+++ WR+A+ + +L ++AAV +GLG+T P + P+ Sbjct: 182 VPLALFPQGCVYRKRAIRTLDQSKRSWRVAFGSHSLTGIQAAVASGLGITVLPTTAVLPE 241 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 + LP LP TE L + N + + + Sbjct: 242 HSLC---FDLPRLPPTELALVGAGGALNAVQSALVDFLREA 279 >UniRef50_B1LS77 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=B1LS77_METRJ Length = 294 Score = 264 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 93/283 (32%), Positives = 146/283 (51%), Gaps = 5/283 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 NLD+D+LRTFV +L +FA AA + R+QSAVS Q+++LE+ VG+ L + GR LT Sbjct: 5 TNLDMDVLRTFVTGFELGSFARAAERLGRSQSAVSTQLRKLEEQVGQPLVQKAGRGLALT 64 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G +LGYA+++L NDEA L + L+G +G + + A++ LP +L R S YP++ Sbjct: 65 AAGESMLGYAKRLLELNDEAVDRLRGTELEGWARLGLAQDFAESWLPAVLKRFSRAYPRV 124 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSA-FKALNLRTSPTHWYCAAEYI-LQKG-- 184 ++V+V A + E E+D+ + A + P W ++ L Sbjct: 125 RIEVQVGLGAQLIEKALKDELDVALVWGDGGGAPHAQRVADVPIRWIGPPDWPGLAGLGR 184 Query: 185 EPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMS 244 EP+PL P FR ++ L+ +PWRL + + +L + AA + GLG+TAR + Sbjct: 185 EPVPLAAFAPPCTFRSAAVSALDARGLPWRLVFTSPSLSGLWAAAEGGLGITARTAVGLP 244 Query: 245 PDLRVLSGVD-GLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 L VL GLPPLP+ L + + + + Sbjct: 245 KTLSVLDPAATGLPPLPNAALTLHQAEAELSPAVARLTDILLE 287 >UniRef50_A5ED63 Transcriptional regulator, LysR family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5ED63_BRASB Length = 290 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 84/274 (30%), Positives = 139/274 (50%) Query: 16 LRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQLL 75 LR+ ++V + + A + RTQ A++ Q+QRLE+L GK+LF GR LTE G +L Sbjct: 2 LRSLISVVETGSITETARRLGRTQPAITLQLQRLEELTGKQLFVHGGRRLALTEDGGIVL 61 Query: 76 GYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVRVK 135 YAR ILR +DE S L ++G + +G D A ILP +L+ +P++ +++ Sbjct: 62 TYARSILRLHDELISQLASQEIEGQVVLGTPDLYAAFILPSILSVFRKSFPRIQVELNCA 121 Query: 136 RNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLVLLDDP 195 + + E+++ EVD+ + T +R W + + PIPL LL Sbjct: 122 LSTPLVELVKRSEVDIALVTRMNDFTGGQVVRREQLVWMTGEQSAAHQERPIPLALLPQG 181 Query: 196 SPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGVDG 255 + +RD +A L A++ WR+A + ++ ++AA AG+ VT + +R L DG Sbjct: 182 NIYRDHAIAALEAANLRWRIACQSESVGGLQAAAFAGMAVTVLGRSALVAGMRELGPADG 241 Query: 256 LPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 LP LP E LL + ++ A ++ + Y Sbjct: 242 LPALPQVELLLYKSSGATSKAATALHDYLAHYLR 275 >UniRef50_A0NRR7 Transcriptional regulator, LysR family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NRR7_9RHOB Length = 280 Score = 263 bits (674), Expect = 4e-69, Method: Composition-based stats. Identities = 88/278 (31%), Positives = 147/278 (52%), Gaps = 1/278 (0%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 + LD LLRTF+A D +F+ AA V ++ + VS Q+QRLE +GK LF R RN LT Sbjct: 1 MQLDHALLRTFLACVDAMSFSRAATRVHKSPATVSMQIQRLEDRIGKPLFVRDTRNLALT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G +L GYAR+ILR +DEA + ++G +TIGA D+ +LP +L R +S++P++ Sbjct: 61 RTGEELEGYARRILRLHDEAVEAFRQPEMEGTVTIGAPDDYIAAMLPDVLRRFASLFPRV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 L+V ++ + +E +DL + T + +R P W + + + +P+P Sbjct: 121 ELNVVCAQSTALLPQVEDGRIDLAIVTR-TGGTEGRLIRREPMVWISSRDGQAMERDPLP 179 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 + L + S R + LA L ++ + +R AY + + A+ V+AGL V A + P + Sbjct: 180 VALYEPGSQARTVALAALGRSGLRYRSAYSSFSHSALVTLVEAGLAVAAVVQMAVPPTVE 239 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 + GLPPL + +L + + + + A+ Sbjct: 240 RVDHDSGLPPLDPLDIILVRSKHTRSSACEALADALLE 277 >UniRef50_A1B7H3 Transcriptional regulator, LysR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B7H3_PARDP Length = 290 Score = 263 bits (674), Expect = 4e-69, Method: Composition-based stats. Identities = 86/283 (30%), Positives = 140/283 (49%), Gaps = 2/283 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 L+ DLL+TFV +++ F AA V RT SAVS Q++RLE +G+ LF RH R+ LT Sbjct: 9 LETDLLKTFVTISETGNFTVAAKRVFRTPSAVSMQIRRLEDQLGRALFVRHPRHVTLTAD 68 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L +A+ ILR NDEA S L+G + GA D+ LP +L+R ++ +P + + Sbjct: 69 GEAFLVHAKDILRINDEALSRFRVPQLEGRVRFGAPDDFGVRYLPAILSRFAATHPLVEV 128 Query: 131 DVRVKRNAYMAEMLESQEVDLMV-TTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 +V + + +A E+ E+D+++ + + + + P W A + + P+PL Sbjct: 129 EVFLSTSVILARRFEAAEIDMILTVSAQSDPAPGQVIHSEPLVWVGARDGMAFSRTPVPL 188 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 L P+R LA L+KA +R+AY + AAV A L + PV ++ R Sbjct: 189 ALSSHGCPWRAAALAALDKASRRYRIAYTSEAAAGQLAAVMADLAIAPLPVSLVDEQHRR 248 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQ 292 L+ +G + + L +P + AQ + + Sbjct: 249 LTEKEGFGAIGSYQLRLQKNPDIGS-AAQAFADHVRESFGRQE 290 >UniRef50_A9IU06 Transcriptional regulator, LysR-family n=23 Tax=Proteobacteria RepID=A9IU06_BORPD Length = 307 Score = 263 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 96/280 (34%), Positives = 137/280 (48%), Gaps = 3/280 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD LLRTF+ + D +FA AA + T SAVS M+RLEQLVG L AR R LT+ Sbjct: 20 LDTVLLRTFLEIVDSGSFATAAERLALTPSAVSGHMRRLEQLVGASLLARTTRRLELTQA 79 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L Y R IL EA + L + L+G L IGAS++ A LP +L R +P + Sbjct: 80 GDTLYAYGRNILDLEREARAKLRGTPLRGRLRIGASEDFAGAWLPQVLQRFRQSHPAATV 139 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPS-AFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 +++V A + E +DL+ L P W AA+ +L GEP+PL Sbjct: 140 ELKVGITADLLRQQERGHLDLVFGKQCSRVERSGTLLWNEPLVWAYAADRLLVAGEPLPL 199 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 + +P +R+ +A L + D WR+ + +S++ AA +AG VT LRV Sbjct: 200 AVFPEPCVYRESAVAALGRTDRAWRIVFESSSMAGCLAAARAGFAVTVVADSQRGAGLRV 259 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 L G DGLP LP + + N ++ + +A Sbjct: 260 LDGEDGLPELPAARFYAF--AGNENPVSAALIEAARRAGQ 297 >UniRef50_A4XSC8 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=A4XSC8_PSEMY Length = 294 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 83/283 (29%), Positives = 142/283 (50%), Gaps = 5/283 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 L+ D+LRTFVA+AD +F AA V R+ +AVS Q++RLE+ +G+ LF R R LT Sbjct: 12 LESDVLRTFVAIADSGSFTRTAAQVFRSTAAVSLQIKRLEETLGQRLFIREARQVRLTAE 71 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LLGYAR++L+ N+EA ++ + L G + +G ++ + +LP +L + +P + + Sbjct: 72 GEVLLGYARRLLKLNEEAVANFLKPALSGRVCLGIPNDLSTRVLPGVLTTFARSHPAVQV 131 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFK---ALNLRTSPTHWYCAAEYILQKGEPI 187 DV V R+ + +++ E+DL + + + W + + P+ Sbjct: 132 DVCVGRSVELVAKVDAGELDLTLINAGNDGLDDARGEVIYSEELVWAGRDGGLAIQRSPL 191 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL L + +R L L++ + +R+AY AA+ A L + P ++ P L Sbjct: 192 PLALANPGCAWRRTALDALDRQGVAYRIAYSCEQCAGQEAAMTADLAIAPFPRSLVKPPL 251 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIY-QAMESYHN 289 R L GLPPL + L NE + + Q ++++ Sbjct: 252 RRLGAEQGLPPLGEYHIKLI-RGHQRNEAVEALATQMIQAFAQ 293 >UniRef50_A1WVW1 Transcriptional regulator, LysR family n=11 Tax=Proteobacteria RepID=A1WVW1_HALHL Length = 318 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 82/316 (25%), Positives = 133/316 (42%), Gaps = 21/316 (6%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +N+ L L+ F +VA +F AA + TQ AVS Q+++LEQ VG LF + G+ LT Sbjct: 1 MNITLRQLQVFESVARHLSFTRAAEELYLTQPAVSMQIKQLEQQVGLPLFEQIGKRIYLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSL--MFSNLQGVLTIGASDESADTILPFLLNRVSSVYP 126 E G ++ YA++I E L + G L + +A+ LL + P Sbjct: 61 EAGEEVRRYAQRISAELRELADGLEALRGLNSGRLRL-TVASTANYFATDLLAAFTRRQP 119 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFK--ALNLRTSPTHWYCAAEYILQKG 184 + + V + ++ E+DL V P A +P A ++ L G Sbjct: 120 GVTFQLEVTNREGVIRRIQDNEMDLAVMGRPPEGLDVAAEAFMPNPLVIIAAPDHPLADG 179 Query: 185 EPIPL--------VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 PIPL VL + S R+ V L + + R S+ A++ +V+AGLG+ Sbjct: 180 SPIPLERLQDELFVLREQGSGTRNAVQRVLEERGMNLRGGLEMSSNEAIKQSVQAGLGLG 239 Query: 237 ARPVEMMSPDLRVLSGV----DGLPPLPDTEYLLCYDPSSNNELAQVIYQA-MESYHNPW 291 + ++ +L + +G P L YL+ + A+ Q ++ H W Sbjct: 240 VVSIHTVALELELGRLRVLNVEGFP-LERQWYLVHRSGKRLSPAAEAFRQFILDEAHRHW 298 Query: 292 QYS--PMSAPEGDDSL 305 Q P AP + L Sbjct: 299 QVPETPGVAPPQEPPL 314 >UniRef50_Q2C715 Transcriptional regulator n=2 Tax=Photobacterium RepID=Q2C715_9GAMM Length = 287 Score = 262 bits (672), Expect = 8e-69, Method: Composition-based stats. Identities = 71/263 (26%), Positives = 134/263 (50%), Gaps = 1/263 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D++ LR+F+A + +F AA R+QSA+S QM++LE + +LF + GR +LTE Sbjct: 1 MDIEALRSFLAFVETGSFTRAAKQSFRSQSAISMQMKKLEDELNTQLFTKDGRMLVLTED 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +L +A +I+ +D+A L Q + +G D+ A++ILP+++ + +P ++L Sbjct: 61 GQRLATHATQIIATHDDALLELKNKLPQQTIHLGCPDDYAESILPYIVALLREEHPHISL 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 + + ++ +L+S +DL + T P++ + L+T W + + + +P+P+V Sbjct: 121 QITCAPSVHLKGLLDSNRLDLAIVTRSPTSQEGYFLQTDKGIWVGSPHHDIVNQQPLPIV 180 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 L F + L K + ++L + A + V+ GL ++A M DL L Sbjct: 181 LFQRDCKFHSAAIEGLIKRNRHYQLVSCCISATANKGLVRQGLAISAMAKCSMPNDLIEL 240 Query: 251 SGVDGLPPLPDTEYLLCYDPSSN 273 LP LP + +L + Sbjct: 241 IAPH-LPSLPVVDIVLSLPSKPH 262 >UniRef50_B1KPF3 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=B1KPF3_SHEWM Length = 281 Score = 262 bits (672), Expect = 8e-69, Method: Composition-based stats. Identities = 85/274 (31%), Positives = 141/274 (51%), Gaps = 1/274 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D+D LR+F+A + +F AA +TQSAVS QM+RLE +GK LF + GRN +L+ Sbjct: 1 MDIDALRSFIAFVETGSFTRAAKQTHKTQSAVSMQMKRLEGELGKGLFEKEGRNLVLSVQ 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +L YA+ +L+ +DE ++L +++ L +G D+ AD+ILP ++ + PKL L Sbjct: 61 GRRLALYAKPLLQLHDETVATLKSPDVRPRLHLGCPDDYADSILPSIVKLLHRYLPKLEL 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 + + + ML+S E+D + T P + + L T W + E + P+P+V Sbjct: 121 QITCASSYLIRVMLDSGELDAAIVTRLPDSEEGYLLTTDVGVWIGSEEMDITAQNPLPIV 180 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 L F + L K +RL +S+ A++ VK G+G+ A D V+ Sbjct: 181 LFQKDCKFHLAAIDGLMKQGREYRLMASSSSATAIKGMVKQGIGLGAMAKLSAGQDCFVI 240 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 + LPPLP L +++ L+ + Q + Sbjct: 241 -ESESLPPLPSIGIALVISSRAHSPLSAELAQQL 273 >UniRef50_B9Y467 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y467_9FIRM Length = 309 Score = 262 bits (672), Expect = 9e-69, Method: Composition-based stats. Identities = 72/309 (23%), Positives = 137/309 (44%), Gaps = 15/309 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + L LR FV V + AA ++ +Q AVS +++LE G LF R + LTE Sbjct: 1 MTLRHLRIFVEVCRTGSITKAAESLHLSQPAVSLAIRQLEDYYGILLFDRISKKLYLTES 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G ++L YA I+ D+ + L + G L IG+S + +LP L+ R + +P++ Sbjct: 61 GNKMLSYASHIIESFDDMETQLKNWDSAGTLRIGSSISTGTQMLPQLVRRFNLRFPQIRT 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFK--ALNLRTSPTHWYCAAEYILQK----- 183 V + + + + + + ++DL + + + T A ++ L + Sbjct: 121 QVLIDNSRIIEDKVLTNQLDLALVESLSYSPDIVCVPFYTDRLIVITAPKHPLTQNPECT 180 Query: 184 ---GEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 P++L + S R++V A L A++ + +++ ++ AVK +G++ P Sbjct: 181 VKALADYPVLLREPGSGTREVVDALLVTAEVQITPLWESTSTRSIINAVKENIGISILPY 240 Query: 241 EMMSPDLRVLSGVDGLP---PLPDTEY-LLCYDPSSNNELAQVIYQAMESYHNPWQYSPM 296 E++ +++ V GLP PLP+ ++ + AQ + + Y N S Sbjct: 241 ELVKNEIQS-GAVAGLPLASPLPNRTCSIIHHRNKYLTPSAQAFIEVCQEYSNLSTESFQ 299 Query: 297 SAPEGDDSL 305 + E S Sbjct: 300 TEEERQSST 308 >UniRef50_B9JHY5 Transcriptional regulator protein n=2 Tax=Agrobacterium RepID=B9JHY5_AGRRK Length = 298 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 85/288 (29%), Positives = 138/288 (47%), Gaps = 1/288 (0%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + NLD D L +FVAVA+ +F AAA + RTQ+AVS + + E+ + LF R R L Sbjct: 1 MRNLDSDALASFVAVAETGSFTAAAERLGRTQAAVSMAIGKWEERLDLRLFDRGHRRVTL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G +LLGYAR+I DEA ++L+ + + +G D+ L+ R PK Sbjct: 61 TPIGERLLGYARRIRAIEDEALATLLEGRNESRVRLGMPDDYLTLFGTALMQRFVPQCPK 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 ++LD++ + + M+ES+E+D+ + T K +R W AA+ ++ I Sbjct: 121 VSLDLQYDFSHRLEYMVESRELDIAIITQNAVEPKGEIIRLEKQVWCAAADRYPERENCI 180 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 L L + R VL+ L++AD WR+ Y +S + ++ AV +G +T P + Sbjct: 181 QLALFPEGCRARPQVLSALDRADRRWRIVYSSSDIAGIQLAVHSGDLLTVLPESAVPASW 240 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSP 295 R L DG+P LP + P + + + + P Sbjct: 241 RKLGPEDGMPELPTLRLAMVL-PQQPRLPVRQLATFLRAEFQRSLVEP 287 >UniRef50_A0NXC5 Transcriptional regulator, LysR family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NXC5_9RHOB Length = 302 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 80/292 (27%), Positives = 138/292 (47%), Gaps = 3/292 (1%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +++LL FVAVA+ A + + RTQ VS Q++RLE+ VGK L R R LT Sbjct: 5 RFNIELLEAFVAVAEAGNVTHAGSRLNRTQPCVSTQLRRLEERVGKPLIERSARTMNLTP 64 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G L +A +ILR ++EA L L G + +G + A L + ++P + Sbjct: 65 AGRILYQHATEILRSHEEARLRLSAPELTGTVHVGLPEWYATGQLQSIFCNFVRIHPNVK 124 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 L++ V +A + EML + E++L + + K + + P HW L P+PL Sbjct: 125 LEMTVADSATLHEMLSNNEINLAIALVSQTKQKPVEIFEEPLHWAVGDNCPLTD--PLPL 182 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 ++ +P PFR++ +L +A W +++ A + AV +G G+ P + ++ Sbjct: 183 IMFPEPCPFREISFGSLARAGRQWYERITTTSVAAAQVAVLSGAGLCCLPSGAILEGFKI 242 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPEG 301 L DG P LP T+ + ++ + + + + + +P SA G Sbjct: 243 LKEQDGFPKLPATQLAIYTQSTTQSPIVDYLEEHLNDLLQ-NAIAPRSALAG 293 >UniRef50_C5CZ98 Transcriptional regulator, LysR family n=6 Tax=Proteobacteria RepID=C5CZ98_VARPS Length = 289 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 76/287 (26%), Positives = 135/287 (47%), Gaps = 5/287 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 + +D LR VAV D + +AAA V R+QSAVS Q+++LE +G+ + R R+ +T Sbjct: 4 PDFQIDWLRALVAVVDAGSLSAAAPLVHRSQSAVSMQIKKLENALGQAVLLRGPRHLEVT 63 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G QLLGYAR++L E +++ L G + +G D+ A T L +L + Y + Sbjct: 64 PAGAQLLGYARRMLELQSETQNAMFGPELAGRVRLGVPDDYASTYLTPVLRSFAGRYKGV 123 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 +++ +++ + + E+DL + + + L P W A++ + P+P Sbjct: 124 EIELTCEQSTSLIPKIARGELDLALVSRDKPQ-RGQLLFQEPLVWVGTAQHEAWRRNPLP 182 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 + + + S R L++L +R+ Y +S+L AAV++GL V + P L+ Sbjct: 183 IAVYEAGSMARTAALSSLAARRRAYRIVYHSSSLAGQLAAVESGLAVAVFTRCSVPPHLQ 242 Query: 249 V---LSGVDGLPPLPDTEYLLCYDP-SSNNELAQVIYQAMESYHNPW 291 + L LP L + S + +Y+ M +P Sbjct: 243 ILQNLPSGFDLPRLKSMDVTALRSKVSLRSPAVDAMYEQMVRTLSPA 289 >UniRef50_Q65FY0 Probable transcriptional regulator YwqM n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65FY0_BACLD Length = 297 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 60/298 (20%), Positives = 116/298 (38%), Gaps = 15/298 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +++ L+TF + D+ F AA + QS V+ +Q +EQ + K LF R G+ +LTE Sbjct: 1 MEIRHLKTFKTIVDIGGFTRAADYLGYAQSTVTSHVQAIEQELRKPLFYRLGKKMMLTEA 60 Query: 71 GIQLLGYARKILRFNDEACSS-LMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LL YA +++ ++A G L IGAS+ LP +L+ +S YP++ Sbjct: 61 GKHLLPYAAEMVELYEKARHIPENDQEPSGNLIIGASESLTVYRLPAILHEFTSKYPQVT 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRP---SAFKALNLRTSPTHWYCAAEYILQKG-- 184 + ++ + + L+ ++D+ + L P + E+ + Sbjct: 121 VTLKSSTCWQLRDELKQGKIDVAFLLDNDRKENDLHVEKLVNEPMVFIFPKEHPAGQKAL 180 Query: 185 ------EPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + + +RD L + + ++ A++ V GLGV+ Sbjct: 181 DDLTFNANETFLYTEHGCSYRDFFEEYLRQRGVIADHTMEFWSVEAIKQCVMCGLGVSLL 240 Query: 239 PVEMMSPDLRV--LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYS 294 P+ D+ L G L T+ + + + + W+ + Sbjct: 241 PLITTRTDIEEGKLQGTLVRDALFSTQM-VYHKNKWLSPAMAAFTDIVRRKAREWEQT 297 >UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepID=A9W9P6_CHLAA Length = 301 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 71/301 (23%), Positives = 116/301 (38%), Gaps = 12/301 (3%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L LR F AVA + AAA + Q A+S+Q+ +LE+ +G LF R GR+ LTE Sbjct: 1 MELRHLRYFEAVARHSHVTRAAAELHIAQPALSKQISQLERELGITLFDRVGRSLRLTEA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LL YAR IL +EA +++ G +TIGA +LP LL YP + Sbjct: 61 GEALLPYARAILAQVEEARAAMAERIGLKAGRVTIGAPPTVGAHLLPPLLTIFHQRYPGI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHR--PSAFKALNLRTSPTHWYCAAEYILQKGEP 186 L + + ++LE+ DL V L P + + L + Sbjct: 121 TLRLHEAGIQSLLDLLEAGITDLAVVALPVTDEQLTVTPLLNEPLVLIVSTTHPLARRSE 180 Query: 187 I--------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + +L R+ L +A + + V AGLGV+ Sbjct: 181 VMMTELRHERWILSPSSYELREATLKACREAGFTPQTVLEGGETETLVRFVAAGLGVSLV 240 Query: 239 PVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSA 298 P ++ V+ L + L+ + + A+ + + + + Sbjct: 241 PALAVAGCTDVVRLTVSDQHLTRSLGLVWRSDRTASPAARALREFLVNEVRQRPIETFIR 300 Query: 299 P 299 P Sbjct: 301 P 301 >UniRef50_Q7W0V6 Putative lysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7W0V6_BORPA Length = 293 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 87/285 (30%), Positives = 131/285 (45%), Gaps = 2/285 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD LLR+FV V D F A+ + TQS VSQ + RLE+ +G L R R+ L TE Sbjct: 6 LDPVLLRSFVTVVDTGNFTRASEHLHLTQSTVSQHVIRLEENLGCRLLDRGQRHVLPTEE 65 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LLGYAR ILR DEA S+ + VL +GA ++ L +L + + YP L L Sbjct: 66 GERLLGYARSILRLADEARESVAAAQGNAVLRLGAPEDFMGAALMPVLAPLLARYPLLRL 125 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYI-LQKGEPIPL 189 + + + E+DL++ P W A + L GE +PL Sbjct: 126 EFDSGLSHQLLRRYRDGELDLLLVKQWEVDADCQAHWPEPLCWVAARDGPTLPAGEAVPL 185 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 + + +R + TL + PW + Y +++L + AAV AGLGV+ P +LRV Sbjct: 186 AVFPAGALYRQEMTRTLEASGRPWHIRYASTSLAGLVAAVGAGLGVSLLPAASAGGELRV 245 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYS 294 L DG P + + L + + A+ ++ + Sbjct: 246 LRKRDGFPAVDGLQLGLYARAR-LGAAGRDLRDALAAHCGRRAAA 289 >UniRef50_B7GI02 Transcriptional regulator, LysR family n=2 Tax=Bacillaceae RepID=B7GI02_ANOFW Length = 304 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 64/308 (20%), Positives = 124/308 (40%), Gaps = 24/308 (7%) Query: 1 MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR 60 M+ + R ++L L TF VA N+F A+ + QS+V+ Q+++LE+ LF R Sbjct: 1 MMGSGR---RMNLHYLHTFREVAKWNSFTKASEMLGYAQSSVTTQIKKLEEEFDVVLFER 57 Query: 61 HGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFS-NLQGVLTIGASDESADTILPFLLN 119 G LT+ G +LL YA KI+ DEA +L L G L+IG + A LP L Sbjct: 58 WGGKIKLTDAGAELLEYANKIISLIDEAKQNLSEQTELAGSLSIGTIESVAGFYLPPYLQ 117 Query: 120 RVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVT---THRPSAFKALNLRTSPTHWYCA 176 + K+ L ++ + + ++ + DL + + ++ P Sbjct: 118 AFKQKHSKVNLLLQQNICNRLVKGVKEGKYDLAIILDEKREDPDLNVIVIKQEPLVLVAK 177 Query: 177 AEYIL--------QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAA 228 ++ L L++ + +R+++ +I + ++ A++ Sbjct: 178 PDHRLTRLDKIDIHALGDEKLIVTEQGCSYREVIGNLYRNYNIRFEYTIELGSIEAIKRC 237 Query: 229 VKAGLGVTARPVEMMSPDLRVLSGVDGLPPLPDTEYLL-----CYDPSSNNELAQVIYQA 283 V GLG+ P+ + +L G P+P+ E L + ++ + + Sbjct: 238 VAYGLGIAFLPLMAVEAELE--KGRLVRVPIPEAEIHLFLQLVYHRKKWLSQSLKQLINL 295 Query: 284 M--ESYHN 289 + + Sbjct: 296 LVDREHKR 303 >UniRef50_Q0B2N7 Transcriptional regulator, LysR family n=9 Tax=Burkholderiaceae RepID=Q0B2N7_BURCM Length = 302 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 89/301 (29%), Positives = 133/301 (44%), Gaps = 7/301 (2%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 NLD LLRTFV V+ +T AAA A+ TQ A+SQQ++RLE+ G+ LF R LT Sbjct: 3 RNLDTSLLRTFVTVSRRSTMTAAAHALHLTQGAISQQIKRLEECFGQRLFDRSQGRLKLT 62 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G +LL A +++R ND + GVL +GA + T L + + YP + Sbjct: 63 AAGERLLERAEQLVRLNDRIWDDMSEPVFAGVLRVGAPSDLVGTYLAGVFKAFAQHYPHV 122 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 + + + ++ L VD+ V S LRT P W A P+ Sbjct: 123 EIVLVNLASVELSAALLDGRVDIAVIEQPASEPGGERLRTEPLAWVGAVGGNAHLKRPLA 182 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 + ++ D FR + L + +I WR + + A +A V+ + VTA + DL+ Sbjct: 183 VSIVSDACVFRPALFDALTQHEIAWRTVFENGDIEATKATVRMDMAVTAWLASTVPSDLQ 242 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPEGDDSLLIE 308 +L GLP LPD L PS L + + + + AP G D L+ Sbjct: 243 MLRPAQGLPTLPDFAVTLHLPPSGTTPLVEEMANFIR-------NGFLHAPSGGDGRLLS 295 Query: 309 R 309 Sbjct: 296 G 296 >UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CY97_PAESJ Length = 305 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 60/297 (20%), Positives = 111/297 (37%), Gaps = 15/297 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L FV VA AA + QSAVS+Q+ +LE+ +G +LF + GRN LT Sbjct: 1 MELRQLYYFVKVAKKEHVTQAAEELHVAQSAVSRQIHQLEEELGVKLFLQKGRNLQLTPV 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L A IL + A + +G + +G +++P ++ ++P + Sbjct: 61 GQLFLKRAEVILDDLERAVVEIHEFMDPEKGEIRLGFPHSLGVSVVPQVVAAFRKLHPNV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFK---ALNLRTSPTHWYCAAEYILQKGE 185 R + + E+DL + P + L T + L + Sbjct: 121 KFRFRQGMYPSLIRDMVKGEIDLAFISPFPDEHEQVCGEVLLTEELFAILPPSHPLAGEQ 180 Query: 186 PI--------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA 237 I V+ + R +V +A ++ + +R V AG+GV+ Sbjct: 181 EIDLIQLKEDTFVMFSEGYSLRPIVWEACQEAGFTPKIGFEGEETETIRGLVAAGMGVSL 240 Query: 238 RPVEMM--SPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQ 292 P + + L+ P + ++ +A+V + + Y N + Sbjct: 241 LPEMALYHAGVLQSAKVRVRTPNVTRNIGIIHRSNEKMPLVAKVFHGFLLRYFNELE 297 >UniRef50_A4YNE0 Putative transriptional regulatory protein, LysR family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YNE0_BRASO Length = 286 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 83/287 (28%), Positives = 131/287 (45%), Gaps = 3/287 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELF-ARHGRNKLL 67 +N D+D LR+F+ +AD +F+ AA V R+QS +SQQM +LE VGK L R GR L Sbjct: 1 MNFDIDCLRSFLVIADTMSFSRAAETVGRSQSTISQQMTKLEMQVGKPLLTRRKGRVLEL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G + + YAR+IL+ NDEA +S+ L G + +G + L R P Sbjct: 61 TPEGDRFVQYARRILQLNDEAYASMRDDVLVGFVRLGVPLDFFGRDFTTWLARFKRKNPM 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + ++V ++ + + E DL A ++ T W Y I Sbjct: 121 VGIEVEANQSENLMKRSARGEFDLAFFKQDVGARAGTSMLTEQLVWVSGPNYSPDD-ASI 179 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PLVL + +R L++L + D W L++V+ + ++AA GLG+T ++ P L Sbjct: 180 PLVLFPEGCAYRRFALSSLKQHDRRWHLSFVSPSFECLKAATLEGLGITVLARALVQPPL 239 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYS 294 R++ GLP LP E +N+ + + Sbjct: 240 RIIRQDLGLPRLPPVELA-YARGRTNSRTVGELTTFLADRLAGAGLP 285 >UniRef50_Q317K8 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q317K8_DESDG Length = 301 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 83/297 (27%), Positives = 142/297 (47%), Gaps = 18/297 (6%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 + L++DLLR F AVA+ F AA + + TQSAVSQ+++RLE +G+ L R R L+ Sbjct: 1 MELEIDLLRCFAAVAEEGGFTAAGSRIGLTQSAVSQRIRRLEDRLGRRLLVRTTRTLSLS 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LL YA+++L +DEA + L S+++G L IG D +P + + +P + Sbjct: 61 TEGEMLLHYAQRMLALHDEALARLRASSIKGALRIGFVDYFGPDAMPETIRQFIRSFPDI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEY--------- 179 L++ + ++ + ++D+ + + W C Y Sbjct: 121 HLELHAGLGMELRQLFDHGKLDV-LVAGDDGQHTGTCIARDTLVWACHTAYNCAAARPAF 179 Query: 180 --------ILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKA 231 G P+PLV L P FR +A L PW + + A+ + +V AAV+A Sbjct: 180 MLDHLAAEPAATGAPVPLVALPLPCVFRSAAIAALESLQRPWEVVFTATGMASVLAAVRA 239 Query: 232 GLGVTARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYH 288 GLG+T P ++PDL++ + +G PPLP + + + N + + + + + Sbjct: 240 GLGITVLPRSALTPDLKIPAPEEGFPPLPAFSTCIYANDNVNLQALEALTRHLRQQL 296 >UniRef50_UPI00016C47B2 transcriptional regulator, LysR family protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C47B2 Length = 291 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 75/291 (25%), Positives = 120/291 (41%), Gaps = 15/291 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQL---VGKELFARHGRNKLL 67 ++L LR FVAVA+ +F AA TQ +S+Q+ RLE VG+ LF R GR +L Sbjct: 1 MELHQLRYFVAVAETGSFTRAAEREDVTQPTLSEQIMRLESKPHGVGRRLFDRLGRKVVL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T+ G +LLG+A+ IL EA ++ S G L +GA A +LP + R +P Sbjct: 61 TDAGRELLGHAQGILAAVKEAERAVRDSAEGGSLRVGAIPTIAPFLLPGTVTRFRKDHPN 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHR--PSAFKALNLRTSPTHWYCAAEYILQKGE 185 + L ++ + L + E+D+ + L P A++ L Sbjct: 121 VQLQLKEDLTERLLADLLAGELDVALMAMPVRDDRLHVEKLFAEPLVMALPAKHELASKT 180 Query: 186 PI--------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA 237 + P +LLDD F D VL+ ++ + R+ + + A V AG GV+ Sbjct: 181 EVKLADVLEEPFILLDDMHCFGDQVLSLCHRGGLEPRVVCRGEQIVTLLAMVAAGQGVSI 240 Query: 238 RPVEMMSPDLRVLSG--VDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 P + D G P T + + + + + Sbjct: 241 VPEMAATADTSKQCAYRPLGKPTPVRTLCAVWHKQRFRPPSLRALVDMAKR 291 >UniRef50_A4J1K6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J1K6_DESRM Length = 308 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 68/299 (22%), Positives = 128/299 (42%), Gaps = 18/299 (6%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 + L L F VAD +F+ AA A+ +Q AVS ++ LE +LF R+ + +T Sbjct: 1 MLLSLYQFHIFKTVADKKSFSGAAQALYISQPAVSMHIKALEDHFRTKLFDRNTQQVTIT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYP 126 E G L YA KIL D+A + + N++G L+IGAS + ++P +L + +P Sbjct: 61 EAGRILYKYADKILNLIDQAENDISRFTGNIEGPLSIGASFTVGEYVIPKILGTFNKEHP 120 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLMVTTHRP--SAFKALNLRTSPTHWYCAAEYILQKG 184 ++ ++V + ++ QE+DL + ++ + A +Y L + Sbjct: 121 QVRALLQVTNTEQIVNLVLKQEIDLGLIENQVNKTELVAKPFLQDELIIVIPPDYPLSEH 180 Query: 185 E--------PIPLVLLDDPSPFRDMVLATLNKADI---PWRLAYVASTLPAVRAAVKAGL 233 + +PLV+ + S R + A L + + + + AV+ AV+AG Sbjct: 181 QFISMEDLVALPLVMREQGSGTRKITEARLIEEGVDLNTLNIVMELGSTEAVKEAVEAGF 240 Query: 234 GVTARPVEMMSPDLR---VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 G T + +L+ ++ L YL+ + + + + S+ + Sbjct: 241 GTTIISKWAVQKELKLGTLVPVRFKDISLFRKFYLIYHRDKFQTTVVEEFITFLISFCS 299 >UniRef50_Q2BIB7 Probable transcription regulator protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIB7_9GAMM Length = 289 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 2/285 (0%) Query: 7 PIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKL 66 +L D L++FVA D + + A VCR+Q A+S Q+Q+LE +G + R R Sbjct: 2 RAKDLQFDWLKSFVATVDAGSISGATRVVCRSQGAISLQIQKLESAIGAPVLIRDSRRIS 61 Query: 67 LTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYP 126 LT G LL YAR+IL+ + EA + ++G++ IGA ++ A L ++ + YP Sbjct: 62 LTPIGNDLLIYARQILKLHSEALEITRGTEVRGIIRIGAPEDYAQAYLSPVIRAFAQRYP 121 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEP 186 + + + + +A + + +ES +DL +TT + L HW + Y +P Sbjct: 122 NVEIMLTCEPSAALIDQVESGVLDLAITTVHGLD-RGTFLFNEEVHWVASESYGTWNKDP 180 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +P+ D+ S R +VL L++ + + + Y + + A +G+GV ++P+ Sbjct: 181 LPIAAHDEGSHIRKVVLEKLDQCNKRYNIVYQSPSTAGQIIAATSGIGVAVLTQCSLAPE 240 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSNN-ELAQVIYQAMESYHNP 290 L VL +GLP LP L + + + ++ + S Sbjct: 241 LIVLGEDEGLPSLPSMRVELIRRKGTQDITSIEAMHDEIISALQR 285 >UniRef50_A6LQS5 Transcriptional regulator, LysR family n=5 Tax=Clostridium RepID=A6LQS5_CLOB8 Length = 324 Score = 260 bits (665), Expect = 5e-68, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 126/294 (42%), Gaps = 15/294 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D L F+ ++ L +F AA + QS+++ Q++ LE +G +LF R G+N LT Sbjct: 27 MDFKQLNAFLTISKLQSFTKAADNLGYAQSSITTQIKLLESELGVKLFERIGKNITLTHE 86 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNL-QGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL YA++IL+ + ++++ +++ G LTIGA++ LP +L +YP++ Sbjct: 87 GKKLLPYAKQILKLSSAVKNAVLNTDVPSGTLTIGAAESLCVLRLPEILKEYKKLYPEVD 146 Query: 130 LDVRVKRNAYMAEMLESQEVDLMV---TTHRPSAFKALNLRTSPTHWYCAAEYIL----- 181 + ++ A L +D+ + F + P + L Sbjct: 147 ISLKFGNCAEFKYFLNDNIIDVAFSLGVKINSAEFISEIEIPEPMLLLAYPGHPLINKKE 206 Query: 182 ---QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + E PL+L + +R + LN +I +A ++ A++ +GLG+T Sbjct: 207 VFPKDIESEPLILTEMGCSYRATLENILNSCNIKPNVAIETGSVQAIKQFTMSGLGITLL 266 Query: 239 PVEMMSPDL---RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 P + ++ +++ P +L + + + S+ Sbjct: 267 PKVAVDDEINSGKLVPLNWKGPDFGIISQVLYHKNKWISPALKEFLNLSRSFME 320 >UniRef50_P96725 Uncharacterized HTH-type transcriptional regulator ywqM n=3 Tax=Bacillus RepID=YWQM_BACSU Length = 293 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 61/293 (20%), Positives = 112/293 (38%), Gaps = 16/293 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L TF+ A+ F A + QS+V+ Q++ LE+ +G LF R G+ +LTE Sbjct: 1 MELKQLITFITAAEHVNFTLTAKMLNYAQSSVTSQIKSLEEEIGTPLFERLGKRLILTEA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF-SNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G YA+KI+ +EA + G L IGA++ LP ++ +P++ Sbjct: 61 GKTFKSYAQKIIALTEEAKMATNQVRETTGTLKIGATESQCTYRLPPIIKEFKQAFPQVK 120 Query: 130 LDVRVKRNAYMA-EMLESQEVDLMVTT---HRPSAFKALNLRTSPTHWYCAAEYI----- 180 L + + A E L ++D+ A +L A ++ Sbjct: 121 LIFKPYISNEQAKEQLLQGQLDITFILDVNRMEDALHVESLIQDEIKMVAANDHPFPADL 180 Query: 181 ---LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA 237 L+ + L+L +D +R + L+ + I ++ A++ V AGLG+ Sbjct: 181 PVTLKDLQNETLLLTEDGCSYRTLFENNLHDSGIYPN-KLEFVSIEAIKQCVMAGLGIGI 239 Query: 238 RPVEMMSPDLRVLSGVDG--LPPLPDTEYLLCYDPSSNNELAQVIYQAMESYH 288 P + D+ + P L + + + Sbjct: 240 LPEMTVKDDIAAGRMKELNWQSDCPVFTQLAWHKDKWMSAPLKAFIDLTRKTF 292 >UniRef50_A6W298 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=A6W298_MARMS Length = 283 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 99/278 (35%), Positives = 165/278 (59%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 NL + L+T +A+ + +F+AA+ V RTQSAV+ QMQ LEQ++G LFA +GRN+ LT Sbjct: 4 NLQISHLKTLIAINEEGSFSAASERVGRTQSAVTHQMQNLEQIIGTPLFAMNGRNRELTN 63 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G+ LL +A +I+ ++A S+ + G + +G E A+ + P +L + +P Sbjct: 64 AGLTLLRHAYEIIALCNQAVSAAEKNFNIGTIRVGTPLEIAEDLWPQVLRVFNEAWPNTR 123 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 + + V+R+ + ++LES E+DL ++T R A K L + +W AA++ EP+PL Sbjct: 124 VILHVERSPLLMQLLESGELDLAISTRRLGAHKGKPLTSLAVNWIAAADWEYIPREPLPL 183 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 +L D+PS FR M L+ L+ + +P+ +V+S++ VR+AV AGLGVTAR + P++++ Sbjct: 184 ILTDEPSMFRRMALSALDISGLPYYEKFVSSSMLGVRSAVIAGLGVTARTISGFPPEIQL 243 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 L GLPPLPD Y + + + + + + Y Sbjct: 244 LDSKIGLPPLPDISYYVHQSDQRMTKECEALLEIILQY 281 >UniRef50_Q0K9T5 Transcriptional regulator, LysR family n=2 Tax=Burkholderiales RepID=Q0K9T5_RALEH Length = 284 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 119/278 (42%), Positives = 167/278 (60%), Gaps = 2/278 (0%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 NLD+ LLRTFVAVA+ FA AA V RTQ+AVSQQMQ+LE + LF R GR+K LT Sbjct: 4 RNLDIGLLRTFVAVAEKENFAVAAEQVFRTQAAVSQQMQKLETALDCVLFERVGRSKRLT 63 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G +LL YAR+I+ NDEA ++ + +GA ++ D+++P L + V+P L Sbjct: 64 TAGTRLLDYARRIVGLNDEAYRAMTQRAFDEPVKVGACADAVDSLIPEYLKMCAEVFPGL 123 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRP--SAFKALNLRTSPTHWYCAAEYILQKGEP 186 +D++V R ++ L E+DL+V F + LRTSP W A Y Q G P Sbjct: 124 RVDIQVGRRRWLTSSLRRGEIDLVVMLDPVPNPEFDQVVLRTSPVTWIAGARYHHQPGAP 183 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +PLVL++ PF M + +L+ A+IPWR+A+ STL +RAA++AG+GVT R VEM++PD Sbjct: 184 VPLVLIEGACPFHSMAIKSLSDANIPWRVAFQTSTLAGIRAALRAGMGVTPRTVEMLAPD 243 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 L+VL G+P LP Y L +E A I + + Sbjct: 244 LKVLDPHAGMPALPTISYRLYARTDKLSESALGISRLI 281 >UniRef50_C3AM26 YwqM (Probable transcriptional regulator YwqM) n=3 Tax=Bacillus RepID=C3AM26_BACMY Length = 304 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 52/300 (17%), Positives = 115/300 (38%), Gaps = 13/300 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +++ L+TF + +L + AA + QS V+ +Q +EQ +G+ LF R G+ +LT+ Sbjct: 1 MEIRHLKTFKTIVELGGYTRAADYLGYAQSTVTGHIQAIEQEMGQPLFNRLGKKMVLTDV 60 Query: 71 GIQLLGYARKILRFNDEACSSLM-FSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LL YA +++ +++A + + G + IGA + LP +L+ YPK+ Sbjct: 61 GKHLLPYANEMIALSEKAKQIPSVDNEITGKIVIGAPESLTIYRLPSILHEYKKKYPKVK 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVT---THRPSAFKALNLRTSPTHWYCAAEYILQKGE- 185 + ++ + L+S +D+ L + +Y + + + Sbjct: 121 ITLKASTCRELRNDLKSGNIDIAFLLDTERHEEDLHIEQLVMEQMAFVFPKDYTVTQTDS 180 Query: 186 -------PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + + +R L + I + ++ A++ V GLG++ Sbjct: 181 QDVQFSQEETFLYTERGCSYRAFFEHYLQRQGIQHESTFEFWSIEAIKQCVMCGLGISLL 240 Query: 239 PVEMMSPDLRVLSGVDG-LPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMS 297 P+ + + + L L+ + + + + W+ + Sbjct: 241 PIITVGQEQKDKKLQAVILNEAKFATQLVYHKNKWFSPALHEFLMIIRKHAKGWREVEST 300 >UniRef50_Q13JW6 Transcriptional regulator, LysR family n=5 Tax=Proteobacteria RepID=Q13JW6_BURXL Length = 283 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 84/281 (29%), Positives = 133/281 (47%), Gaps = 8/281 (2%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELF--ARHGRNKLLT 68 LDL+LL T + V D +F A V RTQS VSQQ+++LE+LVG+ L R G T Sbjct: 2 LDLELLNTLICVVDEGSFTRAGERVHRTQSTVSQQVRKLEELVGRTLLLRDRTGNQVTAT 61 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 EHG L YAR++L EA +L+ + IG ++ + +L+ P + Sbjct: 62 EHGELLAQYARRLLALAQEAQDALVSDVELTPVRIGVPEDFDARRMSAMLSGFVKAKPGV 121 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQK---GE 185 L+ + + L + E+++ + P + + L W L + E Sbjct: 122 RLETVAGMSVDLQRKLAAGEIEIALVKREPGSGECLASWPESLVWVRGGNVELPEESADE 181 Query: 186 PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSP 245 PIPL L +R + +L+KA WR+A+ + +L ++AAV +GLGV+ P + P Sbjct: 182 PIPLALFPHGCVYRQRAIRSLDKALRRWRIAFGSQSLTGIQAAVSSGLGVSVLPTSAVLP 241 Query: 246 DLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 + R+ GLP LP TE L N L + + + + Sbjct: 242 EHRLC---AGLPQLPPTELALVTSGGVLNALQLALVEFLRA 279 >UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Bacillales RepID=C6IV95_9BACL Length = 305 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 66/300 (22%), Positives = 111/300 (37%), Gaps = 15/300 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L+ FV VA AA + QSAVS+Q+ +LEQ +G LF + GRN LT Sbjct: 1 MELRQLQYFVKVARKEHVTQAAEELHVAQSAVSRQIHQLEQELGVNLFMQKGRNLHLTAV 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G IL+ D A S + QG + +G + ++P ++ +YP + Sbjct: 61 GQLFCSRVEMILKDLDRAVSEVHEFLDPEQGEIRLGFPNSLGIHMIPSVVAEFRKLYPNV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKAL---NLRTSPTHWYCAAEYILQ--- 182 R + + S EVDL + P + + T + L Sbjct: 121 KFRFRQGTYPTLIRDVVSGEVDLAFISPFPENHDQVTGNVVLTEDLVAILPPGHPLAGEQ 180 Query: 183 -----KGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA 237 + + +L R +V +A ++A+ +R V AG+GV+ Sbjct: 181 SIKLSQLKDEKFILFSKGYSLRPIVWHACLEAGFTPKIAFEGEETDTIRGLVAAGMGVSL 240 Query: 238 RPVEMMSPD--LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSP 295 P + L+ + P + T L+ +AQ + Y +P Sbjct: 241 LPEMALFQSFTLQPIRVRISEPKVTRTIGLIHRVDEKLPLVAQSFRMFLLEYFGLQVDTP 300 >UniRef50_B5WKB1 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=B5WKB1_9BURK Length = 306 Score = 257 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 85/282 (30%), Positives = 134/282 (47%), Gaps = 3/282 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 NLDLDL+RTFVAVAD + AA + TQ AVSQQ++RLE ++ LF R R L+ Sbjct: 13 RNLDLDLVRTFVAVADSGSMTVAANLLHMTQGAVSQQVKRLEDVLDCLLFVRKTRRLELS 72 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L AR++LR NDE + + L+G L +G + T L + + P + Sbjct: 73 RQGELFLVKARQLLRLNDEIWADMNVQPLRGALRVGVPYDLV-TRLAPAMKTFAEANPHV 131 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 + + + +++ + S +D+ + + S + + P W + P+P Sbjct: 132 DISLVCGTSPELSDAVNSGRLDVSLVEYVASEAQGEVVCIEPLVWVKGRGSDAWQKRPLP 191 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L ++D+ FR +VL L I WR + + + A A V+AGL +TA V + DL Sbjct: 192 LSMVDERCAFRPVVLGVLADEGIAWRTVFESGNIEATAATVRAGLAITAWLVSTVPADLE 251 Query: 249 VLSGV-DGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 L+ GLP LP L P++ AQ + + + Sbjct: 252 TLTPRVAGLPALPPFAICL-RLPATVQPAAQEFARHVRDSMS 292 >UniRef50_B8DKN9 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=B8DKN9_DESVM Length = 699 Score = 257 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 71/290 (24%), Positives = 115/290 (39%), Gaps = 15/290 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L LRTF AVA L +F AAA + QS VS ++ LE +G LF R GR LTE Sbjct: 1 MELRDLRTFAAVARLLSFHRAAAELNAAQSTVSARIAALETELGVRLFERLGRRVALTEA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF-SNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +L+ YA K++ DEA + + S L+G+LT+ + LP ++ +P++A Sbjct: 61 GERLVQYAAKLIDVEDEARAWVTGESRLRGLLTVRVPESLCAYRLPPVIAAFRRRHPEVA 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTH---RPSAFKALNLRTSPTHWYCAAEYILQKGEP 186 L + + + L DL R L P A + L + Sbjct: 121 LHLTACTLNGLEKDLRQGITDLAFVMADSVRGGDLNVEALGVEPLVLVAAPHHPLAARDR 180 Query: 187 I--------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + LVL +R ++ L I S+ A+R V +G+G+T Sbjct: 181 VVARDLHGITLVLSTTDCAYRTVIEEALAAEGIQPAAGLEFSSASALRGCVASGVGITLL 240 Query: 239 PVEMMSPDLRVLSGV---DGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 P + +LR + P ++ + + + Sbjct: 241 PEAAVRDELRAGTLRALAWADQPFETAVLMVRHRGKWVSPYMDTFMELCR 290 >UniRef50_C3BMM7 Putative uncharacterized protein n=3 Tax=Bacillus RepID=C3BMM7_9BACI Length = 298 Score = 257 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 111/293 (37%), Gaps = 16/293 (5%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 + L++ L TF A+ F A + QS+V+ Q++ LE +G LF R G+ LT Sbjct: 1 MILEIKQLITFKTAAENLNFTQTAKKLNFAQSSVTAQIKALETELGTPLFERLGKRLFLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFS-NLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 E G + YA K++ + EA +L + G L IGA + LP +L + +P+ Sbjct: 61 EAGRKFQLYADKMIALSHEAKMALKGDEEISGTLVIGAQESQCTYRLPSILKEFKTQFPQ 120 Query: 128 LALDVRVKRN-AYMAEMLESQEVDLMVTTHR---PSAFKALNLRTSPTHWYCAAEYILQK 183 + L + + + E L ++DL A +L + L + Sbjct: 121 IKLIFKPAHSNEDVKEKLMEGKLDLAFILDECKAEDALHVESLVREKLKIVVFPNHPLLE 180 Query: 184 G--------EPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGV 235 E L+L + +R + D+ ++ A++ V AGLG+ Sbjct: 181 KSIISTKDFESETLLLTELGCSYRTIFEELFRAEDVYPVNKIEFVSVEAIKQCVIAGLGI 240 Query: 236 TARPVEMMSPDLRVLSGVDGLPP---LPDTEYLLCYDPSSNNELAQVIYQAME 285 P ++ D++ + + + P + + Q + Sbjct: 241 AILPAMVVEKDIQQGTMKELVLENTISPIFTQIAWHKDKWITAPLQQFIEVTR 293 >UniRef50_Q3JTX1 Transcriptional regulator, LysR family n=37 Tax=Burkholderia RepID=Q3JTX1_BURP1 Length = 367 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 89/283 (31%), Positives = 143/283 (50%), Gaps = 3/283 (1%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + L +LLR+FVAVA +F AA+ V +QS VSQ ++RLE+L+ + LF R RN L Sbjct: 86 MRPLPPELLRSFVAVAQTGSFTAASERVSLSQSTVSQHIRRLEELLDRPLFERDTRNVRL 145 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 G L YA +IL DEA +S+ L G + +G S++ A T L L P+ Sbjct: 146 APSGEALFRYAVRILALMDEAVASVCGPPLSGKVRLGLSEDFALTHLTAALASFVQRNPE 205 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + L++ + + + L++ DL+ + + +RT P +W L EP+ Sbjct: 206 VELEIATGLSGDLFDALDAGRHDLVFAKRIAGSRRGRVIRTEPLYWCAGPASPLTGREPV 265 Query: 188 -PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 PL L PS R VL TL+ P+R+A ++++ +RAA AGLG++A ++ Sbjct: 266 LPLALHPQPSVSRQRVLETLDAIGRPYRIAVASTSIAVLRAAASAGLGISAFAGYVIPHG 325 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 L L GLPPL + EY++ +++ + + + H Sbjct: 326 LAKL--EAGLPPLGELEYVIDRPANASRPALALEATLVAAAHE 366 >UniRef50_UPI0001745DD5 transcriptional regulator, LysR family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745DD5 Length = 290 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 68/290 (23%), Positives = 122/290 (42%), Gaps = 14/290 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L LR VAVA F+ AA +Q ++SQQ+Q+LE +G+ LF R R+ LT+ Sbjct: 1 MELHQLRYMVAVARTGNFSRAAQTCHVSQPSLSQQIQKLEDELGERLFDRLRRHAKLTQA 60 Query: 71 GIQLLGYARKILRFNDEA--CSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G + L A +IL D A + QG +T+G A +LP L+ S+ YP + Sbjct: 61 GERFLPRAVRILEEMDAATREARAANDLDQGRITVGVLPTIAPYLLPKLIAAFSAKYPGV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHR--PSAFKALNLRTSPTHWYCAAEYILQKGE- 185 + V A + E+ + EVD+ + + F+ L + L + Sbjct: 121 QVVVHEDTTARLRELTAACEVDIAIASLPLQDERFEVRELFDEELLLALPNNHRLVDQKK 180 Query: 186 -------PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 +L+ + D VL ++ D +++ ++ + V++ V++G+G+T Sbjct: 181 IIPEDLLEEKFILMKEGHCLGDQVLHFCHRQDFHPQVSCRSAQMETVQSLVQSGMGITLV 240 Query: 239 PVEMMSPD--LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 P + D ++ + P T + A + ME Sbjct: 241 PRMALQEDRSVKPVYRSLSDPSPKRTIVAFWPRQRPLGKAAAAWLKLMEE 290 >UniRef50_A9GYT7 Transcriptional regulator n=4 Tax=Rhodobacteraceae RepID=A9GYT7_9RHOB Length = 299 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 79/291 (27%), Positives = 135/291 (46%), Gaps = 2/291 (0%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + NLD DLLRTF+AVA + AA + R+QSA S Q++RLE ++G+ +F RHGR +L Sbjct: 1 MENLDSDLLRTFLAVAQAGSVTDGAARIHRSQSATSIQVKRLEAILGRSVFDRHGRGVVL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 +E G +LL A+ + D + + G L +G D+ L +++ + +P Sbjct: 61 SETGRRLLPVAQDVTARLDVTLREISQCAVSGQLHVGIPDDHGRAKLVEIISAFTRHHPG 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + L V + LE +DL + + L PT W + GE + Sbjct: 121 VELVVTCALSTEFPNALEKGALDLAIYEVEHPKPQEEVLFEDPTCWMTSTHRDFPTGESL 180 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 P+ L D +RD+ +A+L P+R+AY + ++ V AAV+AG+ V + L Sbjct: 181 PVALFDHACWWRDVAIASLEARGKPYRIAYSSQSVSGVIAAVEAGIAVGLLGRSSLHSGL 240 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN--PWQYSPM 296 + G P ++ ++ + +L + +A+ S + P Sbjct: 241 AAVDENLGFGSTPASKLVMAARGAKETQLQAAMKEAVRSAFQTTALESRPG 291 >UniRef50_Q167A0 Transcriptional regulator, LysR family, putative n=4 Tax=Rhodobacterales RepID=Q167A0_ROSDO Length = 297 Score = 256 bits (656), Expect = 6e-67, Method: Composition-based stats. Identities = 79/286 (27%), Positives = 130/286 (45%), Gaps = 5/286 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 INL +LLR F+ V ++ +F AA + RTQ A+S Q++RLE+ VG L R G+ LT Sbjct: 7 INLPTELLRAFITVVEVASFTRAAEILGRTQPAISLQVKRLEESVGCTLIERKGKEISLT 66 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 E G L +AR+ILR ND A + N L +G + A L L V Y + Sbjct: 67 ERGEALAIHARQILRLNDLAMAQFERPNPLAKLRVGLPVDYAVNTLQSCLTDVVKQYSDI 126 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNL-RTSPTHWYCAAEYILQKGEPI 187 +++R + ++ + S ++D+ V + L W A ++ + I Sbjct: 127 QIEIRCDLSKHLLSAMRSNDIDIAVALFDGDDQQFLFRNWKEQPTWVGATDFEICDQADI 186 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PLV+ +RD + L A WR+AY + + ++ AV+ GLG++ + + Sbjct: 187 PLVVHPYGCVYRDRMATALKLAGKSWRIAYSSPGIGGLQRAVQDGLGLSCLTAPTVQSGM 246 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNN----ELAQVIYQAMESYHN 289 R + DGLP LP L + + +E++ + Sbjct: 247 RKFTEQDGLPVLPPLHIGLFARQTQLGAGGYAAIDAMVTTLEAHAS 292 >UniRef50_Q5QVA7 Transcriptional regulator, LysR family n=2 Tax=Idiomarina RepID=Q5QVA7_IDILO Length = 280 Score = 256 bits (656), Expect = 7e-67, Method: Composition-based stats. Identities = 68/281 (24%), Positives = 133/281 (47%), Gaps = 5/281 (1%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + +L L+ LR+F AV +L + A + R+Q A+S Q+++LEQ +G EL R G L Sbjct: 1 MKHLSLEALRSFSAVIELGSMTLAGERMGRSQPAISLQLKKLEQQLGVELLTRQGSGFAL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G L YA+++L ND+A + + G + +G + E A ++LP +L + + VYP+ Sbjct: 61 TADGDVLFDYAQRMLALNDQAWAQFEPQQVSGKVRLGITSEFASSLLPKVLGQFAQVYPQ 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + L V + + L + D+++ + + ++ W L + Sbjct: 121 VTLQVTSALSKDLLSGLGQ-QFDIILALREQTNKSDVLIQREELVWVGLPG--LLEQPGW 177 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 P+V+ + +R +L +A P+R+ Y + + AA+ +GLG+T + D+ Sbjct: 178 PMVVAPEGCIYRRRAEQSLQRAHQPYRITYTNTDFSGLTAALNSGLGITVLAKSTVPKDI 237 Query: 248 RVLSGVDGLPPLPD--TEYLLCYDPSSNNELAQVIYQAMES 286 +L PLP+ + ++ + A + +++ Sbjct: 238 PILESFSDNKPLPNPGSVNVIMRLAGGASSAASQLADYLKA 278 >UniRef50_A5IA94 Transcriptional regulator, LysR family n=6 Tax=Bacteria RepID=A5IA94_LEGPC Length = 283 Score = 256 bits (655), Expect = 8e-67, Method: Composition-based stats. Identities = 93/268 (34%), Positives = 137/268 (51%), Gaps = 6/268 (2%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +++D L+ F+AVA+ +F AA V RTQSA+SQQ+ +LE L+ K L R GR LT Sbjct: 1 MSIDTITLQCFLAVAETQSFTKAAQRVGRTQSAISQQIAKLENLIEKPLINR-GRELSLT 59 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LGYA++I + E+ LQG + G ++ A IL +L S ++P++ Sbjct: 60 TDGEIFLGYAKRIYELHRESLDRFKAPELQGEIRFGLPEDFASIILSDVLVEFSRLHPRV 119 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVT--THRPSAFKALNLRTSPTHWYCAAEY--ILQKG 184 L+V + E + DL++ T + +++++ T P W E +L K Sbjct: 120 LLNVECDLTLNLIERFNEGKFDLILIKTTQQQVGSESIHVCTEPVEWIGKKELLPLLDKP 179 Query: 185 EPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMS 244 PIPLVL P +R V+ TL+K I WRL Y +++ AAV+AGLG+TA M+ Sbjct: 180 GPIPLVLSPTPCVYRGNVIDTLDKNHIDWRLVYSSASYAGKMAAVRAGLGITAIQRSMIP 239 Query: 245 PDLRVLSGVDGLPPLPDTEYLLCYDPSS 272 L L D LP L D L S Sbjct: 240 NYLERLDY-DFLPVLNDVHVSLLKKSDS 266 >UniRef50_B2II45 Transcriptional regulator, LysR family n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2II45_BEII9 Length = 287 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 68/280 (24%), Positives = 132/280 (47%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD L+TF+ +A+ ++F+ + QS VS +++LE+++G +LF R + LT Sbjct: 2 LDPLHLQTFLHIAEGHSFSETGRRLGIRQSTVSDHVRKLEEILGHQLFVRDTHHVTLTLE 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L+ +A IL D A + L+G L +G +++ + LP +LN +P++ L Sbjct: 62 GEALVAFATGILAAQDRALRHFAGTKLRGRLRLGVTEDLILSWLPQILNDFVQKHPQIDL 121 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 + + + + ++ E+DL++ + L W A + + L+ Sbjct: 122 SFTIALSNVLIQRFDAGELDLVLCKRWAGEERGELLWRDQVVWVGANPAPISANGQLLLI 181 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 L PS R M L+ L A I W +A + +L V AA +AG+G+ A ++ L + Sbjct: 182 LYPAPSLTRFMALSALESAGISWHIACTSDSLSGVVAAARAGMGIFAHSRSLIPSGLVEI 241 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNP 290 + GLP L + ++++ + + +A+ + + Sbjct: 242 TSSHGLPKLNELDFVMLSANPRYHASIGELTEAIRLHVSR 281 >UniRef50_C5CP23 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=C5CP23_VARPS Length = 301 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 89/294 (30%), Positives = 134/294 (45%), Gaps = 7/294 (2%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +N D LL+ F AV N F AA + TQSAVS Q++RLE+LVG+ LF R R LT Sbjct: 1 MNFDTGLLQAFTAVHRANGFTRAAEQLHLTQSAVSHQIRRLEELVGRPLFHRTTRRLRLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L +A +IL+ D S ++G + G + LP LL + + P + Sbjct: 61 ADGEDFLRHAERILQAQDALARHFRCSPIEGTVRFGVPESFMSEGLPQLLQQFARSCPNV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 L+V V +A M+ +E+DL V + LR P W A + G +P Sbjct: 121 RLEVSVGLTLDLATMVRERELDLAVVVSVSGEVEGTLLRRLPMVWAAAEGFERTDGASLP 180 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L P R + + LN+A IPW A+ + +L +R A +GL V + + P + Sbjct: 181 LAYSPPPCVCRQVSIDALNQAGIPWHGAFSSHSLQDLRTAALSGLAVATFTRDNLRPGMA 240 Query: 249 VLSGVDGLPPLPDTEYLLCY---DPSSNNELAQVIYQAME----SYHNPWQYSP 295 VL GLP LP ++ L Y D + + + +E ++ + P Sbjct: 241 VLDERHGLPALPMLDFTLAYGEGDAGERSPAVAELGRLIEQAEWAHRDKAARRP 294 >UniRef50_A6VRV6 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VRV6_MARMS Length = 289 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 76/273 (27%), Positives = 127/273 (46%), Gaps = 4/273 (1%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + +L ++LLRTF+ VA+ AA + + S VS Q+ RLE L+ L R L Sbjct: 1 MRDLPINLLRTFMVVAETLNLTEAAKQLHKAPSTVSMQLNRLEGLITNPLMERGQHGVRL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G+QL +A+++L +D+ S + GV+ +G D+ A L +L YP+ Sbjct: 61 TAAGVQLRAHAQQLLNLHDQIVGSFQNIEISGVVRLGTHDQYASRTLAPILQDFILSYPE 120 Query: 128 LALDVRVKRNAY-MAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEP 186 L+ + ++LE ++D+ + + LR W + ++ + Sbjct: 121 AELEAFCDYRPDYLVDLLEKGKLDIALVEMLADTEGGIRLRRDELVWVGSKDHFVHTQAV 180 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +PLV+ + R L KA IP+R+A+ + + V AAV+AG+GV P + D Sbjct: 181 LPLVVFAEGCKHRQFACEALTKAKIPYRIAFTSQSRSGVIAAVRAGIGVAIIPYHTLEED 240 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQV 279 L + D LP LPD E L +N ++ Sbjct: 241 LVI---YDNLPNLPDMEVTLFTSEKANEATLRL 270 >UniRef50_B4EPV1 LysR family regulatory protein n=7 Tax=Burkholderia RepID=B4EPV1_BURCJ Length = 293 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 88/281 (31%), Positives = 134/281 (47%), Gaps = 4/281 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD LL TFVAVAD+ +F A + +QSAVS Q+ RLEQ V + L R+ R+ LT H Sbjct: 6 LDTALLHTFVAVADVRSFTGAGRRLNLSQSAVSAQIVRLEQQVDQTLLVRNTRSVTLTPH 65 Query: 71 GIQLLGYARKILRFNDEACSSL-MFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LLGYAR +L + EA + L + + L IG S++ A LP L+ R + L Sbjct: 66 GETLLGYARAMLNLSAEARARLGTGNAVDVKLRIGVSEDFAGGWLPDLMRRHGAARRGLR 125 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 L++ V + E DL++ + + L P W A L +G+ +PL Sbjct: 126 LELVVDIGDSLFRRHADGEFDLVIGSRCSHSGHGATLWQEPLVWAFARHEPLPEGD-VPL 184 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 DP P+R + L A + +R+A + ++ +R +AG+ + P + LR Sbjct: 185 ACFPDPCPYRGAAITALALAGMRYRIACESPSVTGIRTFARAGIAIAPVPRSAIDDTLRE 244 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNP 290 L DGLP LP+ E+++ +D A + Sbjct: 245 LGLPDGLPALPEMEFVMMHDARM--PAAVEFAAMILDETAA 283 >UniRef50_C1DJQ4 LysR family transcriptional regulator protein n=2 Tax=Bacteria RepID=C1DJQ4_AZOVD Length = 317 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 86/294 (29%), Positives = 133/294 (45%), Gaps = 3/294 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 LD+ LLRTF+ V D FA AA + T SAVS ++RLE G L AR R LT Sbjct: 26 PTLDIVLLRTFLEVVDSGGFALAAERLALTPSAVSGHIKRLELAAGDTLLARTTRRLDLT 85 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 + G L YAR I+ EA + L S +QG L +GAS++ A T LP +L +P+ Sbjct: 86 QAGETLYAYARNIVDLEREARARLRGSTIQGRLRVGASEDFAGTWLPQVLQGFHRWHPQA 145 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRP-SAFKALNLRTSPTHWYCAAEYILQKGEPI 187 +++++V A + E +D++ + + L P W A+ E + Sbjct: 146 SIELKVGITADLLRQQERGHLDVVFGKRCSRTNGEGELLWREPLVWAYASACAADLAEAL 205 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL + +P +R+ LA L PWR+ + + ++ +A AG VT + L Sbjct: 206 PLAVFPEPCIYREAALAALGSVARPWRVVFESGSMAGCLSAALAGFAVTVVARSQLREGL 265 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPEG 301 R L + LP LP + N A+ + +A+ S ++ G Sbjct: 266 RELGEEERLPALPAACFYAF--SPRTNPAARALIEAVRSIGQRSRFMAARLHGG 317 >UniRef50_A1WMH7 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WMH7_VEREI Length = 306 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 92/299 (30%), Positives = 137/299 (45%), Gaps = 3/299 (1%) Query: 13 LDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGI 72 +LLR FVAV + N + AA + RTQ+AVSQQ+ RLE +G +LF + R L+ G Sbjct: 9 PELLRAFVAVVECNGYTPAAHYLHRTQAAVSQQISRLEDCIGADLFEKPTRQLKLSGQGK 68 Query: 73 QLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDV 132 LLGYAR++L N+EA L + G + +GA++ A T+LP LL S +YP + +D+ Sbjct: 69 VLLGYARRLLALNNEAMEKLRPGIVSGAVRMGATNCYATTVLPLLLAEFSELYPAIHIDL 128 Query: 133 RVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLVLL 192 V M L DL + + + LR P W + PIPL +L Sbjct: 129 EVGVAEEMQRKLGP-AFDLTINAFQGGEGNGVLLRKDPVVWAMSHRARPHLKTPIPLAVL 187 Query: 193 DDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMS--PDLRVL 250 S R L A W + +S++ ++A V AGL V + P LR+L Sbjct: 188 PQGSLLRRWAQEALTAAGRRWVVVQESSSVEVLKACVLAGLAVGGFQDSTVRAAPGLRLL 247 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPEGDDSLLIER 309 +G P LP TE L A+ +Y+ + PW+ + + + Sbjct: 248 LPEEGFPTLPSTEMWLERADRELPRAAKCLYEFLLEQLPPWEVQESALASDSAGEIAQG 306 >UniRef50_A8ILZ3 Transcriptional regulator n=2 Tax=Xanthobacteraceae RepID=A8ILZ3_AZOC5 Length = 305 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 99/294 (33%), Positives = 140/294 (47%), Gaps = 1/294 (0%) Query: 5 NRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRN 64 + I NLDLDLLR+F AVA+L + +AAA + RTQSAVS QM RL + +G + R GR Sbjct: 13 SMSIKNLDLDLLRSFAAVAELGSISAAAQRIGRTQSAVSLQMDRLAEQLGFPVVERKGRG 72 Query: 65 KLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSV 124 LT G L AR++L ND + S L +G + A++ L +L R+ S+ Sbjct: 73 VALTPRGAAFLDDARRLLDLNDRVLGHHLRSGFSEPLRLGFVQDVAESALQRILARLGSL 132 Query: 125 YPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKG 184 +P + VRV M E L E+DL + + W A L Sbjct: 133 FPGAPITVRVCSTNTMIEKLRIGELDLAAGYRVETDVPTRLIMREQMCWIGARSLRLNPE 192 Query: 185 EPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMS 244 EP+PL++ + P FR ++ L A +R+A + +LP V AAV AGLG+T R + Sbjct: 193 EPVPLLMFESPCIFRSAAISALTAAGRSFRIALTSPSLPGVMAAVGAGLGITLRSARSLR 252 Query: 245 PDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSA 298 PDL + + G PLP EY L + I Q +E + A Sbjct: 253 PDLMTIGDL-GTQPLPHFEYALYSRAENRLPALDQIEQVIEEELRRERPLFAVA 305 >UniRef50_A0RKW5 Transcriptional regulator, LysR family n=81 Tax=Bacillus RepID=A0RKW5_BACAH Length = 306 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 118/295 (40%), Gaps = 15/295 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +++D+L+ FV V + F+ AA + +Q VS ++ LE G L R ++ +TE Sbjct: 10 MNVDILKIFVTVVEQKHFSRAAELLNLSQPGVSMHIRNLENEFGTTLIQRSPKHVQVTEA 69 Query: 71 GIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L +A+++L ++A + + + G L IGAS + +LP +L ++ P + Sbjct: 70 GNILYIHAKQMLSLYEDAKQKINELHNVVTGTLRIGASFTIGEYLLPKILANYANENPHV 129 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRP--SAFKALNLRTSPTHWYCAAEYIL----- 181 + + + + L S ++D+ + + + + L Sbjct: 130 EVHTFISNTEDVLQSLRSNQIDIGLVEGQVVYADVDVETFMQDEMKLVVPPNHPLLRTNE 189 Query: 182 ---QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + VL + S R +++ + + + S++ +V+ AV AGLG+ Sbjct: 190 MNESTLQDQVWVLRESGSGTRAYSDRFIHQHHLKMKRFFTFSSIQSVKEAVSAGLGIAIL 249 Query: 239 PVEMMSPDL--RVLSGVDGLPPLPDTEYLLCYDPSS-NNELAQVIYQAMESYHNP 290 + +L + L V+ + + ++ QV + S+ Sbjct: 250 SDWTVRKELLAKELFHVEVPNEQLIRPFSIVRGKYFIPSKAIQVFLNHVNSFAKK 304 >UniRef50_Q3IFV7 Putative bacterial regulatory protein LysR Family n=3 Tax=Alteromonadales RepID=Q3IFV7_PSEHT Length = 281 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 68/279 (24%), Positives = 133/279 (47%), Gaps = 3/279 (1%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + N+ D LRTFV V + + FA A + +Q AVS Q++RLE L+G +LF + G+ ++L Sbjct: 1 MKNISTDSLRTFVMVVEASGFAKAGDLLGLSQPAVSLQIKRLEDLLGYKLFKKQGQRQVL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 ++G LL A+++++ ND ++ G + +G E A ILP ++ ++YP+ Sbjct: 61 NQYGELLLPMAKQMMQHNDAILQLFTSESITGRVRLGIPSEFAARILPSIIGDFVALYPE 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLR-TSPTHWYCAAEYILQKGEP 186 ++L+V+ + + ++ + DL++ + + + W + L + + Sbjct: 121 VSLEVKSRLSKHLLSQERQDQFDLVLALNEQLDSEQFPIFKQDQLVWVG--DLSLAQNDT 178 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 + LV + +R + L ++ I +R+ Y + L + AA+K GLG+T + + Sbjct: 179 VTLVTAPEGCIYRRRAIEALERSGIKYRIVYSNADLTGLIAALKEGLGITVLAKSTVPNE 238 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 L LP L D L S + + ++ Sbjct: 239 LNYQLKTKFLPSLGDIGISLVKTASEPENAVFKLAEFIK 277 >UniRef50_B2JU37 Transcriptional regulator, LysR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JU37_BURP8 Length = 314 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 67/309 (21%), Positives = 127/309 (41%), Gaps = 12/309 (3%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L LR F AVA+ +F AAA + QS V+ +++ LE + ++LF R +LT Sbjct: 1 MELRHLRMFCAVAEFGSFTAAAEKIHNVQSNVTMRIKELEGELNQQLFIRQKNGVMLTSA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF-SNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LGYA++IL+ DE+ ++L+ ++ +G+L +G+ + +A LP +L + + YP++ Sbjct: 61 GQIFLGYAQRILQLTDESRNALLDNASPRGLLRLGSMETTAAIRLPKVLAKYHARYPQVQ 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTT--HRPSAFKALNLRTSPTHWYC-----AAEYILQ 182 L + A + + +E +D H+ ++ + + + + Sbjct: 121 LSLMTGTTAELIKAVECHRLDGAFVGGFHQNASLHQEEVFQEELVLVSGIEFESVDALAS 180 Query: 183 KGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEM 242 + ++ +R + +A I TL + + V AG+GVT P + Sbjct: 181 RMSAQTVLAFRTGCFYRSTLEHWFFQAGIIPGQVMELGTLDGIMSCVAAGMGVTLLPRSV 240 Query: 243 MSP-DLRVLSGVDGLPP-LPDTEYLLCYDPSS-NNELAQVIYQAMESYHN-PWQYSPMSA 298 + R LPP +L + S + + P A Sbjct: 241 VEGHGTRQAVHCHALPPEFSHVTTVLIRNKDSIVTPAFAALTDLAHAQFAIDADIRPARA 300 Query: 299 PEGDDSLLI 307 S L Sbjct: 301 ENMLASRLA 309 >UniRef50_Q393B8 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=Q393B8_BURS3 Length = 296 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 2/291 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDLDLL FVAVA+ +F AAA V R+QSAVSQ++ RLE +G +F R R+ LT+ Sbjct: 2 LDLDLLHAFVAVAETGSFTAAADVVGRSQSAVSQKVLRLEDALGVRVFERTSRSLRLTQE 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G ++L R++L D L L +G S+ LP +L R +P + L Sbjct: 62 GERVLAGGRRLLAQYDAFMHELREPPQVERLRLGVSENLVHAQLPRILARFGERFPAVQL 121 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSA--FKALNLRTSPTHWYCAAEYILQKGEPIP 188 ++ + + + + +D+ + + + P W A Y G P Sbjct: 122 ELVTGSSPELVDAHRAGLLDVFFARQKHDGAPVRGRVIWREPLVWLAAKNYRNDPGRPAR 181 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 LV++ P +R+++ +L+ A W + AS L V+AAV GLGVTA + ++ Sbjct: 182 LVMMPPPCAYREVMTESLDAARREWSVGCTASNLVGVQAAVAGGLGVTALGKSFLQAGMK 241 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAP 299 +L P LP +E + + + + + + + + + Sbjct: 242 ILPTSAQWPALPASEVAVIGEDPATQPVVEPLVGMFVEVLTARSSTSLDSA 292 >UniRef50_Q2RHB2 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RHB2_MOOTA Length = 297 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 63/250 (25%), Positives = 106/250 (42%), Gaps = 15/250 (6%) Query: 14 DLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQ 73 + L TF AVA+ +F+ AA + TQ A+S +Q LE+ G L R+ R LTE G Sbjct: 4 NQLLTFKAVAEQKSFSRAARVLHLTQPAISLHIQSLEEYFGTRLLDRNNRQVTLTEAGRV 63 Query: 74 LLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALD 131 L YA ++ R DE +L ++G L +GA+ + LP + YP + + Sbjct: 64 LYNYALELSRLYDEVKKALADISGKVKGNLVVGATLTIGEYFLPSIAGEFKRQYPDVEIT 123 Query: 132 VRVKRNAYMAEMLESQEVDLMVTTHRP--SAFKALNLRTSPTHWYCAAEYILQ------- 182 +R+ + E+DL + + +L E+ Sbjct: 124 LRIANTQEIICRTLDGELDLALIEGQAKHPNLIQEDLFQDELVLIIHPEHRWAGRREITP 183 Query: 183 -KGEPIPLVLLDDPSPFRDMVLATLNKADI---PWRLAYVASTLPAVRAAVKAGLGVTAR 238 + PL+L ++ S R + A L KA + ++ + A++ AV+AGLGV Sbjct: 184 EELREEPLILREEGSGTRQITEAGLRKAGLELSTLKVVMELGSTQAIKEAVEAGLGVAII 243 Query: 239 PVEMMSPDLR 248 + ++R Sbjct: 244 SRLAIKKEIR 253 >UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KYF2_THERP Length = 299 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 68/299 (22%), Positives = 127/299 (42%), Gaps = 15/299 (5%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +++ L L+ F +VA +F+ AA + +Q AVS Q++ LEQ++G LF R GR LT Sbjct: 1 MDVSLRQLQVFRSVARHRSFSRAAEDLVISQPAVSAQIKSLEQVLGVPLFQRTGRGVELT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLM--FSNLQGVLTIGASDESADTILPFLLNRVSSVYP 126 E G QLL YA ++L DEA +++ +G + + AS + ++P L YP Sbjct: 61 EAGRQLLPYAERLLNLLDEALAAVHELRCAQRGQVRVAASTTAGIYVVPKALGAFHRAYP 120 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLMVTT--HRPSAFKALNLRTSPTHWYCAAEY----- 179 + L + V + + L + + D+ + P + + + + Sbjct: 121 GVELSLDVLNRFAVHQRLLAGDADVAIMGLIEDPQDLEIEQFLPNELVVIASPRHHLARR 180 Query: 180 ---ILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 L + P ++ + S R + +A + R+A + A++ AV A LGV Sbjct: 181 HQIPLDEIAREPFLVREIGSGTRADMERIFAEAGLSPRVAMELRSNGAIKQAVAADLGVA 240 Query: 237 ARPVEMMSPDL---RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQ 292 P + + +L R++ P+ L+ + A ++ + Y + Sbjct: 241 VMPRDAIGLELETGRLIVLDVQGFPVRRWWSLVRRAGRQPSAAADALWNFLLQYRLQAR 299 >UniRef50_C6CWT6 Transcriptional regulator, LysR family n=5 Tax=Bacillales RepID=C6CWT6_PAESJ Length = 302 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 66/290 (22%), Positives = 113/290 (38%), Gaps = 15/290 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L TF VA F AA A+ S V+ Q++ LE+ +G LF R G+ LT Sbjct: 1 MELRQLNTFCTVATTLNFTRAAEALSYVPSNVTMQIKALEEELGVRLFDRLGKQLALTTA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF-SNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G + L +A+ +L DEA S + + L G LTI A++ LP + R S +P + Sbjct: 61 GKRFLTHAQGVLEKLDEARSVVHDNAQLSGTLTISANEVICSYRLPPVFQRFRSQHPGVR 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRP---SAFKALNLRTSPTHWYCAAEYILQKGEP 186 L R N + + L D++ P S L A ++ L K Sbjct: 121 LIFRSVPNQELKQTLFEGTTDIVYMLDEPICSSGLVVEPLVEENFRLLAAPDHPLAKRTV 180 Query: 187 IPLVLL--------DDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + L + P+R M + K I + A++ +G+G+ Sbjct: 181 LKLEDFHEEVFLTNEKGCPYRTMFDRSFEKEGIDSITYLEFQSAEAIKKCAISGIGIAFL 240 Query: 239 PVEMMSPDLRV---LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 P ++ ++ + +P L +L + + + +A Sbjct: 241 PEIVVEAEVERGELVVLPWQIPDLQVYTQMLRHKDKWLSPIMLSFIEATR 290 >UniRef50_B5ZG57 Transcriptional regulator, LysR family n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZG57_GLUDA Length = 291 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 83/286 (29%), Positives = 139/286 (48%), Gaps = 5/286 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +LD LR+F+AVA+ F +AA + QS VSQ + RLEQ V + L R + LT Sbjct: 5 RDLDPQQLRSFLAVAETLHFTSAARRLGIVQSTVSQHVSRLEQAVNRTLLVRSTKQVTLT 64 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 + G ++ AR IL D A + S ++G + +G S++ T LP +L YPK+ Sbjct: 65 QDGHMMIALARDILSAQDRALTWFDRSVIRGYIRLGISEDLTMTRLPEILGIFREKYPKV 124 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 + +RV + + L++ VDL+ T R + + P W+ + G +P Sbjct: 125 DVHLRVGLSGSLQNDLDTGSVDLLCTKRRIGDARGTTIWREPLTWFG----NWEPGTALP 180 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 LV+ +P+ R + L LN A+IPW +A+ + L A+ AAV+AG GVTA+ + R Sbjct: 181 LVVFPEPAITRQLALECLNAAEIPWYVAFTSENLTALLAAVRAGYGVTAQS-SFLRQYDR 239 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYS 294 L + LP D ++++ + + + + ++ Sbjct: 240 SLPVTENLPETADVDFIVIGKTEALEGPVKALADTIAAHSRQITPR 285 >UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67NJ1_SYMTH Length = 311 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 67/302 (22%), Positives = 112/302 (37%), Gaps = 16/302 (5%) Query: 1 MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR 60 M R ++ L L TF V + +F AA + TQ +V++Q+ LE + +LF R Sbjct: 1 MRGPTRRGSSMLLQHLTTFCRVVEEGSFTRAAQVLNLTQPSVTKQVGALEDYLQVQLFTR 60 Query: 61 HGRNKLLTEHGIQLLGYARKILRFNDEACSSLM--FSNLQGVLTIGASDESADTILPFLL 118 G+ LT G + YAR+++ ++ S G +T+G LP LL Sbjct: 61 QGKRVHLTPVGELVYDYARQVIHLVQRCEEAVREYRSPGSGSVTVGCVHTIGLFTLPELL 120 Query: 119 NRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRP--SAFKALNLRTSPTHWYCA 176 +P++ ++V+ N ML EVD+ + T + + L P Sbjct: 121 AAYVREHPRVKINVKTGNNRETVTMLLHGEVDVGLVTTPQVHERIEVVPLFEDPLVVVAG 180 Query: 177 AEYIL--------QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAA 228 + +P + + FR L + I + A++ Sbjct: 181 PSFAADLPPVVSNADLAQLPFIGYVRGARFRMTTDQVLEEMGIQPQFVMEFDNHEAIKTM 240 Query: 229 VKAGLGVTARPVEMMSPDLR----VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 V G G+ PV + +L V V GLP L T L+ +E + + Sbjct: 241 VALGFGIALEPVSAVQRELISGQLVRLNVPGLPRLSRTTSLILRRGERRSEAVRAFLSLL 300 Query: 285 ES 286 E Sbjct: 301 EQ 302 >UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=Geobacter RepID=B5EGJ2_GEOBB Length = 300 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 110/291 (37%), Gaps = 13/291 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D+ LR F+ VA + F AA A+ Q AVS +++LEQ + LF R + LT Sbjct: 1 MDVRQLRYFIEVAKVKNFTKAAEALHIAQPAVSMAVKKLEQELELSLFNRQDKKVSLTAE 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L +A++IL A + +G + +G + P ++ YP+L Sbjct: 61 GEIFLPHAKRILDDLRAAELEMAELKGLSKGEVRLGIPPMISAYFFPDIIRDFKKSYPQL 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHR--PSAFKALNLRTSPTHWYCAAEYILQKGEP 186 L V + + +M+ E+D+ V P + ++ + + Sbjct: 121 HLSVLGEGAWRIQKMIGQGELDMGVVAGGNFPETLEVRRFLREEIVICVPPDHPFAQRKS 180 Query: 187 I--------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + PLV + R+ L L A + + + V++ V+ G G++ Sbjct: 181 VSLVEFIREPLVFYKEGYYIREFFLEVLKGAGSAPNIVFETNLFSLVKSLVRNGTGISIF 240 Query: 239 PVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 +++ D L V PPL + + + + + + Sbjct: 241 LRMVVAADT-DLVAVPFDPPLHLDLLIAWKKDTYLSLANRAFVDFLLQHAA 290 >UniRef50_Q5FRD9 Transcriptional regulator, LysR family n=1 Tax=Gluconobacter oxydans RepID=Q5FRD9_GLUOX Length = 290 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 83/285 (29%), Positives = 144/285 (50%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 ++LD L++F+AVA+ F +AA + +QS +SQ + RLE+ +G L AR ++ LT Sbjct: 1 MHLDPFHLQSFLAVAETLHFTSAAQSQGVSQSTISQHVSRLEEQLGTRLLARSTKSVRLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 E G L+G AR++L+ D S +G + +G +++ T P +L + +P L Sbjct: 61 EDGTALIGLARQLLQCEDSILSRFRQETPRGTIRLGVTEDLLLTRFPEILGTFRASHPSL 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 + + V +AY+A +L+ E+D+ R + + L T WY A + IP Sbjct: 121 QITMTVGLSAYLAPLLDQGELDVWCGMRRTTETRGQKLWTEDMRWYAPAGTEFPAEQSIP 180 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 LV D S R + + TLNKA W LA+ + +L A+ AAV+AG GVT +P + + + Sbjct: 181 LVTFPDGSVTRRLAIETLNKAGRAWHLAFTSGSLGALLAAVRAGYGVTPQPAFLRNVEHL 240 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQY 293 LP +P E++ + +++ + + ++ Q Sbjct: 241 SHCAPGLLPEMPQVEFIASTRHQTAQGPEELLIRTLCAHIPRLQP 285 >UniRef50_C7I0K1 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I0K1_THIIN Length = 319 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 70/296 (23%), Positives = 119/296 (40%), Gaps = 18/296 (6%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + N + LR F A A F AA + T AVS Q++ LE VG LF R G++ L Sbjct: 1 MKNATIRQLRVFSAAARHLHFGKAAQEMHLTPPAVSMQIRELESQVGLPLFERQGKSVSL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLM--FSNLQGVLTIGASDESADTILPFLLNRVSSVY 125 T G L+ YARK+L +A ++ G LTIG A +P LL R + Y Sbjct: 61 TLTGEYLVVYARKVLATLKDAEDAMARLRGIKAGRLTIGMVST-AQYFVPRLLARFHAEY 119 Query: 126 PKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAF--KALNLRTSPTHWYCAAEYILQK 183 P + + + V + L++ E+DL + P +A P ++ L Sbjct: 120 PHVEVRLSVGNREQLVSHLQNSELDLAIMGRPPRDVATRAEPFAAHPMGIIAPPQHPLST 179 Query: 184 GEPIP--------LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGV 235 G P ++ + S R L++ + L + ++ AV A +G+ Sbjct: 180 GGPHSATLLTQFNFIIREPGSGTRATFEEYLHQHQMELPLFTEMQSNETIKQAVMANMGI 239 Query: 236 TARPVEMMSPDLR----VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 + + + +LR + ++G+P L Y + + A+ + + Sbjct: 240 SFLSLHTIDLELRNNLLTVPSIEGMP-LLRRWYAVNSLAKLLSPGAEAFRYFILEH 294 >UniRef50_Q31FC6 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=Q31FC6_THICR Length = 318 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 114/291 (39%), Gaps = 17/291 (5%) Query: 14 DLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQ 73 L+ F VA + +F AA + TQ AV+ Q+++LE+ LF R LT+ G Sbjct: 4 RRLQVFYTVAKVLSFTKAAETLHMTQPAVTFQVKQLEEFFNTRLFDRTHNKITLTDAGKI 63 Query: 74 LLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALD 131 + YA KIL ++ S + + G L IGAS A+ +LP LL + + + Sbjct: 64 VYDYAEKILDHYEKMNSEVRELTGEVTGSLLIGASTTIAEYMLPSLLGAFKKQFEDVNIR 123 Query: 132 VRVKRNAYMAEMLESQEVDLMVTTHRP--SAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 ++V + M+E+ +DL V + R + L + I + Sbjct: 124 LQVGNTDAIVAMVENNMIDLGVVEAPVYNKNLEVEVCRLDEMVLIVPHGHPLSNRDKISI 183 Query: 190 --------VLLDDPSPFRDMVLATLNKADIPW---RLAYVASTLPAVRAAVKAGLGVTAR 238 + ++ S R ++ + + + + + + AV+ AV++ +G+ Sbjct: 184 EDMRKYRYISREEGSGSRSVIDNYIREQGLSYSDLNVVMELGSPEAVKMAVESDVGLAIV 243 Query: 239 PVEMMSPDLRV--LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 +S +L++ L + PPL + + + Y Sbjct: 244 SRTTISKELKLGTLKALPLDPPLNRPFSHVRQKHKFRHRAVGELLDFAVDY 294 >UniRef50_C0ZGB6 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZGB6_BREBN Length = 298 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 112/283 (39%), Gaps = 15/283 (5%) Query: 17 RTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQLLG 76 +TF VA +F AA + QS+V+ Q+Q LE G LF R G+ LT G LLG Sbjct: 2 QTFREVAKCQSFTRAAEVLGYAQSSVTTQIQNLESEFGVSLFERWGKKIRLTHAGEVLLG 61 Query: 77 YARKILRFNDEACSSLMF-SNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVRVK 135 Y+ ++ DEA ++L + L G L IG + A LP L + P++ + + Sbjct: 62 YSEQLQAVLDEAKANLSEQAQLAGTLRIGTVESLAAFYLPPYLQKFRLEQPRMRIMLAPG 121 Query: 136 RNAYMAEMLESQEVDLMVT---THRPSAFKALNLRTSPTHWYCAAEYILQKGEPI----- 187 + + ++ + D S + + L A + L K E + Sbjct: 122 ICQDLRQGVKEGKFDFAFVLDWLQDQSELENVVLGEEKLVVVAAPTHPLVKKEKVETHDF 181 Query: 188 ---PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMS 244 + + +R M+ + L +A ++ +L A++ V LG+ P ++ Sbjct: 182 TGETWIFTEKGCSYRGMMESVLREAGATVESSFEFGSLEAIKQCVAYDLGIALLPKIVVQ 241 Query: 245 PDLRVLSGVDGL---PPLPDTEYLLCYDPSSNNELAQVIYQAM 284 +++ + V P + L+ + + + + Sbjct: 242 EEVKNGTLVILSFSHPDIRVFRQLVYHKKKWMPQALLRFLELL 284 >UniRef50_B9JX79 Transcriptional regulator LysR family n=1 Tax=Agrobacterium vitis S4 RepID=B9JX79_AGRVS Length = 324 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 77/277 (27%), Positives = 138/277 (49%), Gaps = 3/277 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD D+LRTFVA++++ +F AAA V RT SAVS Q+++LE +G LF R R+ LT H Sbjct: 34 LDNDVLRTFVAISEVGSFTAAADMVFRTPSAVSMQIKKLEDQLGVSLFRRDARSVTLTPH 93 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LL YA++IL N+EA + + + GV+ +G+ D+ + +LP +L ++ +P LA+ Sbjct: 94 GALLLSYAKRILALNNEAVARFLAPEMNGVVRLGSPDDIGELVLPGILTHLARTWPHLAI 153 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPS--AFKALNLRTSPTHWYCAAEYILQKGEPIP 188 +V + + + + + + +D+ + A + + + W P+P Sbjct: 154 EVTIAGSVELRKAVNEKRLDVTLFNFLNGIAADPTMTVMSEKLVWAGKKHGQAHLKTPLP 213 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L + D+ +R + L + +R+AY AA++A + V ++ D+ Sbjct: 214 LSVWDESCVWRKRAMTELTRRGKEFRIAYFCGHHVGQYAAIRADIAVAPLARFLLQEDMV 273 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 L+ DGLP L E L + + + + + Sbjct: 274 ELTERDGLPDLGSYEVGLAVCEDA-SPPVKAVADYVR 309 >UniRef50_A4TW42 LysR-family transcriptional regulator n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TW42_9PROT Length = 300 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 97/297 (32%), Positives = 150/297 (50%), Gaps = 3/297 (1%) Query: 1 MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR 60 M +LDLDLLRTFV + D F A + RTQS +SQQ++RLE +G+ L R Sbjct: 4 MNDNAMLPHSLDLDLLRTFVGIVDSGGFTRAGQRLHRTQSTISQQIKRLEDQIGQPLLLR 63 Query: 61 HGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNR 120 GR +TE G LLGYAR++L +DEA ++L+ + ++ +G S++ A LP +L Sbjct: 64 QGRQVQVTEAGETLLGYARRLLALDDEARATLVRREVGEIIRLGVSEDFASRHLPRVLTA 123 Query: 121 VSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYI 180 S P++ LD+R + + + E+D+ + A+ + P W +A Sbjct: 124 FSRANPQVRLDIRADLSVKLRADFDLGELDVALFKGEQPMDSAVGVWPEPVFWTASAHES 183 Query: 181 LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 L P+PL L FR V+ L+++ PWRLAYV+ +L ++AAV +G+ + Sbjct: 184 LPPLHPLPLALFPQGCLFRRQVVDRLDQSRRPWRLAYVSPSLAGIQAAVASGMALAPLGQ 243 Query: 241 EMMSPDLRVLSGVD-GLPPLPDTEYLLCYDPSSNNE--LAQVIYQAMESYHNPWQYS 294 + PDLRVL + GLP L + L P + LA I + + + P Sbjct: 244 TGLHPDLRVLEAAEMGLPDLSPVWFSLVVRPGGASRHHLAADIARVVGALDLPVAAQ 300 >UniRef50_Q1ZUY1 Transcriptional regulator n=3 Tax=Vibrionaceae RepID=Q1ZUY1_PHOAS Length = 289 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 94/286 (32%), Positives = 150/286 (52%), Gaps = 8/286 (2%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + +LDLD LR FV +L +FAAAA + R+ SA S Q+++LEQ L + GR+ Sbjct: 1 MRSLDLDALRCFVLGIELGSFAAAAERLNRSPSAASAQLKKLEQQCNTSLVTKIGRHLEP 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 TE G +L YAR++L+ NDEA + L+ ++L G + G ++ +D +LP LL S +P Sbjct: 61 TEAGEIILAYARRMLQLNDEALNQLVENSLTGKVVFGLQEDFSDVLLPQLLGVFSRSHPN 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVT-THRPSAFKALNLRTSPTHWYCAAEYILQK--- 183 L L V R+ + + ++S E+D + SA + L P +WY A L++ Sbjct: 121 LQLQSIVGRHQELMDGIQSGELDFSLGWRGEKSAPYSELLAELPLYWYGPANKYLKESIN 180 Query: 184 -GEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEM 242 +P+PLV+LD R +A L++ IPW++ +V +L + +AV AGLGVT R Sbjct: 181 ISKPVPLVMLDGSCIIRQQAIAALDRKGIPWKITFVGRSLSNLWSAVDAGLGVTVRSSFS 240 Query: 243 MSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYH 288 + L DGLP L L + ++ + +Y ++ Sbjct: 241 HPDTISKL---DGLPVLGKLRLCLDRNQYKLEKVQEQLYDELKQQL 283 >UniRef50_Q13GF3 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13GF3_BURXL Length = 289 Score = 253 bits (647), Expect = 6e-66, Method: Composition-based stats. Identities = 78/289 (26%), Positives = 147/289 (50%), Gaps = 3/289 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 L L+LL+ F++VA+ ++F A + + RTQSA+S +++RLE+++G +F R G++ LT+ Sbjct: 2 LHLNLLQVFISVAENSSFTLAGSEMHRTQSAISMKIKRLEEILGVPVFERSGKSIELTKE 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L ++R+IL+ DEA S++ V+ +G ++ A +P +L +P + + Sbjct: 62 GAIFLTHSRRILQLVDEAMSAVGAVRKSNVVRLGCVEDYAVRTIPKILVDFWVEHPDVHI 121 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 ++ +A + + L + D+++ H ++ + + T W +A + EPIP+ Sbjct: 122 EMGTGDSASLLDRLGD-DFDVVLAEHPLNSGEGEVVCTDSLVWGASANHSPHLQEPIPVA 180 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 + R + LN A PWRLA +++ + ++ AV AGL V ++ L L Sbjct: 181 FRSQGALERQWACSALNAAGRPWRLACLSAGIGTLQTAVDAGLAVGVFKASTLAGALNRL 240 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAP 299 + D P LPD E L ++ + I Q ++ Q ++A Sbjct: 241 TPADNFPQLPDVEMALHVMNDGFSQPS--IMQLVKKLRESLQRPQLAAA 287 >UniRef50_Q1QTI0 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=Q1QTI0_CHRSD Length = 315 Score = 253 bits (647), Expect = 6e-66, Method: Composition-based stats. Identities = 74/271 (27%), Positives = 116/271 (42%), Gaps = 1/271 (0%) Query: 19 FVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQLLGYA 78 FV VAD F AAA + +TQS +S ++ LE +G L R R LT G L YA Sbjct: 40 FVTVADSGGFTAAARYLHKTQSTISLRISTLESRLGTLLIERGSRRLTLTGDGETFLVYA 99 Query: 79 RKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVRVKRNA 138 R++L+ EA ++L S L G ++ ADT LP LL R + +P + + + + + Sbjct: 100 RRLLQLQREAIAALGRSQPV-TLRFGIPEDYADTWLPALLERFGARHPDVHVHIHCRMST 158 Query: 139 YMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLVLLDDPSPF 198 + E LE +D+++ + + T W + L G PIPL L + + Sbjct: 159 ELLEQLEKGSLDIVLAVQHAADSGGRPVATEDVVWAAHRRFALDPGRPIPLALFPEQCIY 218 Query: 199 RDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGVDGLPP 258 R LA L W+L + + +R V G +T + D + L +GLP Sbjct: 219 RRRALAALAGIGRDWQLDSTSQSPSGLRVIVNQGQTLTVTDRRSLPEDWQALGEEEGLPS 278 Query: 259 LPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 LP + PS + ++ Sbjct: 279 LPPAVIEVHRSPSLTHPAFDDFVALIDEVLE 309 >UniRef50_A9BWM0 Transcriptional regulator, LysR family n=6 Tax=Proteobacteria RepID=A9BWM0_DELAS Length = 300 Score = 252 bits (646), Expect = 9e-66, Method: Composition-based stats. Identities = 79/294 (26%), Positives = 140/294 (47%), Gaps = 5/294 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +L +D LR VAV D + +AAA + R+Q+AVS Q+++LE +G+ + R R+ LT Sbjct: 8 PDLQIDWLRALVAVVDAGSLSAAAPLLHRSQAAVSMQIKKLETALGQPVLLRGPRHLQLT 67 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G +LLGYAR++L +A ++L +L G + +G D+ A T L +L + Y + Sbjct: 68 PAGAELLGYARRMLELQAQAQAALFGPDLSGRVRLGVPDDYASTYLTPVLRSFAGRYQGV 127 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 +++ +++ + + +DL + + + L P W A ++ + + P+P Sbjct: 128 EIELTCEQSTALIPQVVRGTLDLALVSRDRPQ-RGRLLFHEPLVWVGAPQHEVWRKNPLP 186 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 + + + S R L++L R+ Y +S+L AAV++GL V + P L+ Sbjct: 187 IAVYEAASLARTAALSSLAAQRRAHRVVYHSSSLAGQLAAVESGLAVAVFTRCSVPPHLQ 246 Query: 249 VLSGVDG---LPPLPDTEY-LLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSA 298 VL + LPPL E L S + +Y + + Q A Sbjct: 247 VLQNLPAGFELPPLVSMEVSALRSKASQGSAAVDAMYGQLIATLGQAQSKSGVA 300 >UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=Bacillales RepID=A9VF88_BACWK Length = 305 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 66/302 (21%), Positives = 126/302 (41%), Gaps = 22/302 (7%) Query: 1 MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR 60 MI +I+++L L F+AV+ F AA + +Q ++SQQ++ LE VG LF R Sbjct: 1 MIKLE--VISIELRQLEYFLAVSKELHFTRAAEKLNISQPSLSQQIRALEHEVGMPLFDR 58 Query: 61 HGRNKLLTEHGIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLL 118 G+ LTE G LL +++ I ++A S++ G LTIG+ + +LP + Sbjct: 59 IGKKISLTEAGRVLLSHSKTIFHEVEQARSAIQDLNGLHHGSLTIGSLLTVVNYLLPPAI 118 Query: 119 NRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFK--ALNLRTSPTHWYCA 176 + YP + L V R + E L E+D+ +T + ++ L S Sbjct: 119 LDFNKQYPNIELSVLGLRTGEIREKLLQNELDIGITFLPVQDKEIVSIPLYKSELTLVVP 178 Query: 177 AEYIL--------QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAA 228 + L ++ + PL+LL +++ + + + ST+ ++ Sbjct: 179 TSHSLTERKYVSIEELQDYPLILLPKNFYLTELITSHCQNFNFKPKPILEISTMESLIQM 238 Query: 229 VKAGLGVTARPV----EMMSPDLRVLSGVDGLPPLPDTEYLL-CYDPSSNNELAQVIYQA 283 V G+G+T P + + ++ + + P P + L + + Sbjct: 239 VAQGMGITVLPKPYIDFLQNEHIQAIKIEN---PTPTIDIGLIYRRDKYMCAATRKFIEQ 295 Query: 284 ME 285 ++ Sbjct: 296 LK 297 >UniRef50_A9WIA6 LysR substrate-binding n=4 Tax=Chloroflexaceae RepID=A9WIA6_CHLAA Length = 307 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 65/287 (22%), Positives = 112/287 (39%), Gaps = 16/287 (5%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 L+L LLR +VAV + +F AA + +QSAVS+ +Q LE+ +G L R R T Sbjct: 16 TLNLHLLRIYVAVLEQGSFTKAAEVLTMSQSAVSRAVQELERQLGTTLLERRARGVAPTM 75 Query: 70 HGIQLLGYARKILRFNDEACSSL--MFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 G L +AR+I A +L + +G L IGAS +LP LL YP Sbjct: 76 AGTILGEHARRIFTHERLAIEALNELRGLQRGRLAIGASSTIGIYLLPPLLGNYHRRYPG 135 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRP---SAFKALNLRTSPTHWYCAAEYIL--- 181 + L + + + E L S ++D+ + + R+ + ++ L Sbjct: 136 IELFLDIGNTQQIIERLLSYQIDVAYVEGPVAANEDLQVVPWRSDEMVVIASPDHPLTRR 195 Query: 182 -----QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 + P ++ + S R ++ L ++ R + AV+ AV AGLG++ Sbjct: 196 VTLDCSDLQDAPFIMREPGSGTRKVMEQALAAHNVTVRPVMELGSTEAVKQAVSAGLGLS 255 Query: 237 ARPVEMMSPDLRVLSGVDGLPP---LPDTEYLLCYDPSSNNELAQVI 280 + +L P + + + + Sbjct: 256 MVSRFTIQSELIAGKLRVLNIPGLNIQRQLSRVRLHDRPQSLALEAW 302 >UniRef50_A4G228 Transcriptional regulatory protein, LysR family n=18 Tax=Betaproteobacteria RepID=A4G228_HERAR Length = 367 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 65/295 (22%), Positives = 116/295 (39%), Gaps = 18/295 (6%) Query: 6 RPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNK 65 + N L L+ F VA L +F+ AA + TQ AVS Q+++LE G LF + G+ Sbjct: 43 HTVKNATLRQLKVFETVARLLSFSRAAEELHLTQPAVSTQVKKLEDHAGLALFEQLGKKI 102 Query: 66 LLTEHGIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSS 123 LT G +LL Y+R I++ EA ++ G L + + D P LL + Sbjct: 103 YLTPGGTELLHYSRTIIQQFQEAEDAMTQFKGITGGKLNVAVI-SAGDYFFPRLLVEFAR 161 Query: 124 VYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKA--LNLRTSPTHWYCAAEYIL 181 + + L++ V + L + DL + P+ P A ++ L Sbjct: 162 SHQGVTLNLSVHNREGLLNQLANNLTDLAIMVRPPTDMDTINEPFAPHPYVIVAAPDHHL 221 Query: 182 QKGEPI--------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGL 233 + I P V+ + S + +A + ++ AV AG+ Sbjct: 222 VSKKNIPMSTLIHEPFVVREKGSDTWHSMEDGFGSRIDDLNIAMEIKSTETIKQAVIAGM 281 Query: 234 GVTARPVEMMSPDLRV----LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 G++ +S +L+ + V+G P + + Y++ +AQ + Sbjct: 282 GISFLSAHTISMELQAGSLTVLDVEGFPVMLN-WYVVHRKNKRLPPVAQAFRNFL 335 >UniRef50_C4X8P7 NADH dehydrogenase transcriptional regulator n=9 Tax=Enterobacteriaceae RepID=C4X8P7_KLEPN Length = 341 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 6/294 (2%) Query: 5 NRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRN 64 + + LDLD LR+FV + +FA AA + R+ SAVS Q+++LE G L + GR+ Sbjct: 50 EKRLPGLDLDALRSFVTGMECGSFAQAALRLSRSTSAVSAQLKKLESQCGTALVTKQGRH 109 Query: 65 KLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSV 124 +LT G +LL YAR++L NDE +L L G + +G ++ ++++P +L + Sbjct: 110 LVLTAEGEKLLSYARRLLALNDETLRALQGERLTGEIHLGMQEDFGESLMPGILGQFKRH 169 Query: 125 YPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYI---- 180 +P++ + RV RN + + L + +DL + L L P W + Sbjct: 170 HPQVRIVARVDRNGPLRQALAEEALDLALLWQTEDQGPGLGLC--PLAWIAHPDLDIRAL 227 Query: 181 LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 L GEP+PLV+ D P R +A L+ A IPW++ +V+ +L + AAV+AGLG+T R Sbjct: 228 LVSGEPLPLVMFDSPCLMRSRAIACLDAAGIPWQVVFVSHSLSGIWAAVQAGLGLTIRTR 287 Query: 241 EMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYS 294 M +LR G+ P S++ ++ + M W Sbjct: 288 IGMPGNLRPAGGLLPAPGSLAVSLRQTPREESHSAAVALLGELMTEALQGWLDR 341 >UniRef50_Q141J0 Transcriptional regulator, LysR family n=7 Tax=Burkholderia RepID=Q141J0_BURXL Length = 311 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 91/280 (32%), Positives = 141/280 (50%), Gaps = 3/280 (1%) Query: 2 ISANRPII--NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFA 59 + +R ++ +LD LLRTFV VA+ AA + RTQ+AVS Q++RLE +G+ L Sbjct: 1 MPTSRTLMSRDLDSSLLRTFVTVAETGAMGVAATRLARTQAAVSMQLRRLEDELGQRLLD 60 Query: 60 RHGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLN 119 R R LTE G LL YA IL +A +L + G + +G ++ A LP L Sbjct: 61 RSPRGVQLTEAGHLLLPYAHAILGAGADARRALSAGQVSGTVRLGMLEDIAVGRLPRALR 120 Query: 120 RVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEY 179 R S YP++AL++ V + ++ L +D++V L P W A + Sbjct: 121 RFSIAYPQVALEIVVDSSVALSNRLADSSLDVVVGDPALVDAAPLLTWRQPLFWVGARGF 180 Query: 180 ILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARP 239 + P+P+V ++ VLA L +A I WR+ +++LPAV++AV+AGLGV+ Sbjct: 181 GREVEAPLPVVAFGGACLWQQQVLAALRRAGIAWRIVCTSTSLPAVQSAVEAGLGVSVLL 240 Query: 240 VEMMSPD-LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQ 278 + + +RVL DGLP P ++ L + A Sbjct: 241 DGNIRSESMRVLGQADGLPDAPTADFGLFTREVPGAQAAA 280 >UniRef50_A0L4T1 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=A0L4T1_MAGSM Length = 307 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 115/297 (38%), Gaps = 18/297 (6%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 ++ LR F AVA +F AA + TQ AV+ Q+++LE+ LF RH LT Sbjct: 1 MSFSDTRLRVFYAVAKHLSFTRAAEELYLTQPAVTFQIRQLEEHFDTRLFDRHHNRISLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYP 126 E G+++ YA +IL E ++ +GV+ +GAS + +LP +L+ + Sbjct: 61 EAGLEVYSYAERILDLYRETEKAVSELTGVTRGVVKVGASTTIGEYLLPRILSDYRDQFN 120 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLMVTTHRP--SAFKALNLRTSPTHWYCAAEYILQKG 184 + + + + + LE +D+ + + L Sbjct: 121 DVQIRLSIDNTRTVVRKLEDATIDVGMIEGPVKNKNIARDGCLDDELVVILPPNHPLCDL 180 Query: 185 EPI--------PLVLLDDPSPFRDMVLATLNKADIPW---RLAYVASTLPAVRAAVKAGL 233 + I P V ++ S R +V L A +P+ + + AV+ +V+ G+ Sbjct: 181 DEIPVKELKAYPFVSREEGSGTRQVVHDHLLHAGLPYDQLDIVLELGSTEAVKGSVEGGI 240 Query: 234 GVTARPVEMMSPDLR---VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 G+ + +L+ +++ + T + ++ + + + Sbjct: 241 GIGIVSSASLIKELKLGILVAKRVQGMRITRTINFIHQKQKFRSKAVEAFINFAKDH 297 >UniRef50_Q1IRZ3 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRZ3_ACIBL Length = 296 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 69/296 (23%), Positives = 119/296 (40%), Gaps = 12/296 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +++ LR F AVA TF A+ Q ++SQQ+ +LE +G LF R R+ LT Sbjct: 1 MEVHQLRYFCAVARHGTFTRASEVEHVAQPSLSQQILKLEAELGARLFDRLPRSAKLTVF 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L A +ILR DEA + L+ SN +G +T+G A +LP LLN +S +P + Sbjct: 61 GKAFLPNAERILRQLDEAKTELLEMTSNEKGEVTVGIIPTIAAYLLPKLLNGLSVRHPDV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFK--ALNLRTSPTHWYCAAEYI------ 180 + + + + L +D+ + + + L + ++ Sbjct: 121 TVKISEDITPVLLQRLHDGSIDMAIAALPIPGTELASEELFEEKFYAVLPEKHRRASRAS 180 Query: 181 --LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 L P +LL + FRD V+A N+A + + + + + A V AG+GV+A Sbjct: 181 ISLADLNREPFLLLKEGHCFRDSVIAACNQAAMSPSVVFESGQFATILAMVSAGMGVSAV 240 Query: 239 PVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYS 294 P + P ++ +++ + M Sbjct: 241 PAMAVQPHPGCKFIPISGKHSSRKVGIVTSRHHFQGRAQRLLLKQMRDACGKSAKP 296 >UniRef50_B1Y5W5 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=B1Y5W5_LEPCP Length = 316 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 71/309 (22%), Positives = 124/309 (40%), Gaps = 27/309 (8%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + + LR F VA +F AA A+ T AV+ Q++ LE + LF R GR L Sbjct: 1 MKTVTFRQLRVFTEVARHLSFVRAAEALHLTPPAVTMQVKELESAIELPLFDREGRKVSL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLM--FSNLQGVLTIGASDESADTILPFLLNRVSSVY 125 T G L YA+++L EA ++ GVL++G A +P LL R + Sbjct: 61 TTAGEYFLVYAKRLLSTLKEADDAMARFRKVESGVLSVGMVGT-AKYFVPQLLARFRIEH 119 Query: 126 PKLALDVRVK-RNAYMAEMLESQEVDLMVTTHRPS--AFKALNLRTSPTHWYCAAEYI-- 180 P + L ++V + +L+ EVDL + P A +A P + + Sbjct: 120 PGIELKLQVGANREQLVALLQQGEVDLAIMGRPPREMATRAEPFAAHPHVFIAPPGHPVL 179 Query: 181 ------LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLG 234 L + PL+ + S R ++ + + R+A + ++ AV AG+G Sbjct: 180 AQGRTTLSELASYPLIAREPASGTRALMDRFFQEHRVELRIAMEMPSNETIKQAVMAGMG 239 Query: 235 VTARPVEMMSPDLR----VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIY--------Q 282 ++ + + +LR L V+ P + T ++ + A+ + Sbjct: 240 LSFLSLHTIGLELRCGLLELVHVENAP-IVRTWNIVHMQSRLLSPAAEALRYFMLEHGEA 298 Query: 283 AMESYHNPW 291 + + PW Sbjct: 299 HLAEHDRPW 307 >UniRef50_D2C3C2 Transcriptional regulator, LysR family n=1 Tax=Dickeya dadantii Ech586 RepID=D2C3C2_DICD5 Length = 283 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 65/281 (23%), Positives = 128/281 (45%), Gaps = 7/281 (2%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 +L++ LRTF+ V + AA +CR+QSA+S +++LE ++ LF+R + LT Sbjct: 5 DLEIQWLRTFLTVVKKGSMTVAAEQLCRSQSAISMHIRKLEDVLAVRLFSRDSKKLSLTT 64 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL YA K+L + + S++ S L G ++ G D+ A L +L S YP + Sbjct: 65 AGYELLSYAEKLLLLHSQTKSAIRRSELCGKVSFGIPDDYASAYLSEILTFFSQHYPAVE 124 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 L++ + ++ + +++ +D+ + T + L P W P+P+ Sbjct: 125 LNLLCEPSSLLLPKIDAGTLDVAIITRDVPD-RGHFLSHEPLVWVGYFPEDAIDDAPLPV 183 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 + + S R ++++L + R+ Y + + A K+GL + + +++ Sbjct: 184 AMYEFGSEARKKIISSLEQVTQGCRIMYNSPYIAGQIAVAKSGLALAILTQCSVPEGMKI 243 Query: 250 LSGVDGLPPLPDTEYLL-----CYDPSSNNELAQVIYQAME 285 + + LP LP + + C D + L V+ Sbjct: 244 I-NSEKLPKLPVLDVAIVKGHHCLDDHPASRLTDVVIDMFR 283 >UniRef50_B9R5T3 LysR substrate binding domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R5T3_9RHOB Length = 303 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 84/279 (30%), Positives = 144/279 (51%), Gaps = 4/279 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D+DL RTF+ +A+ ++F+ A+ + RT SAVS Q+++LE ++G +FAR GR LT Sbjct: 12 IDMDLYRTFLVIAETSSFSKASDLIGRTPSAVSMQIKKLETILGVAVFAREGRAVRLTPE 71 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LLGYAR+IL N+EA S + +++G + GA + LP L+R + +P + + Sbjct: 72 GEALLGYARRILMLNEEAVSLFVSPSVEGEVRFGAPADFGTRFLPNFLSRFARSHPGVNV 131 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPS---AFKALNLRTSPTHWYCAAEYILQKGEPI 187 DV + ++ + + + E+DL+++T RP + + P W I +P+ Sbjct: 132 DVHLDGSSALDDKIRKGELDLVLSTVRPGVPMPTGTDVVFSEPLVWVGLEGGIAYDRDPL 191 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL + P+R L+ A P+R++Y + AA+ A L V P ++ P L Sbjct: 192 PLAVSTPGCPWRRAARIALDGAQKPYRISYTSFHSAGQEAALLADLAVAPFPASVVEPPL 251 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 +VL GLP + D ++ P + + +E Sbjct: 252 QVLDDRHGLPKIGDYHIVMKQRPRAG-RATHAFAEHVEE 289 >UniRef50_A8TVM4 Transcriptional regulator, LysR family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TVM4_9PROT Length = 285 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 93/281 (33%), Positives = 141/281 (50%), Gaps = 1/281 (0%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 ++LD +LLRT +A+ D AAA V R+ SAVS Q++RLE +G +LF R GR + T Sbjct: 1 MDLDTNLLRTVLALVDGGGLDAAAQHVGRSPSAVSLQIKRLEDRLGAQLFDRSGRRLVPT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G+ L+ YAR+ILR ND+A + + +L + + A+T LP L S +P++ Sbjct: 61 RRGLLLVDYARRILRLNDDAVRDIAEPAVSQILRVALPQDYAETWLPGFLQTFSVNHPEI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 L V V E L EVD+ + P A+ + P W A + + GE +P Sbjct: 121 DLRVSVGGGVDALEALARDEVDVAMALGLPLTEGAIPVAEVPLLWLGA-DSAVSSGEVVP 179 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 +V P FR+ + L++A PW++ + + +L VRAAV+AGLGVT R E + Sbjct: 180 IVAFPPPCRFRERGIEALDRAGRPWKIVFTSPSLGGVRAAVRAGLGVTVRTPEGLGDGRV 239 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 + G LPPL + PS+ + A + Sbjct: 240 DVGGAWALPPLGTVTLAVYPGPSARSGPAGQFVDSAVDGLR 280 >UniRef50_P20668 HTH-type transcriptional regulator gltC n=17 Tax=Bacillales RepID=GLTC_BACSU Length = 300 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 64/298 (21%), Positives = 121/298 (40%), Gaps = 15/298 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L LR F+ VA+ + AA + QSA+S+Q+ LE+ + LF R GRN LT Sbjct: 1 MELRQLRYFMEVAEREHVSEAADHLHVAQSAISRQIANLEEELNVTLFEREGRNIKLTPI 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G + L + + ++ D A + +G + IG A +LP +++ YP + Sbjct: 61 GKEFLIHVKTAMKAIDYAKEQIDEYLDPHRGTVKIGFPTSLASQLLPTVISAFKEEYPHV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRP---SAFKALNLRTSPTHWYCAAEYILQKGE 185 +R ++ E + ++++DL + P S L T + + L K + Sbjct: 121 EFLLRQGSYKFLIEAVRNRDIDLALLGPVPTNFSDITGKILFTEKIYALVPLNHPLAKQK 180 Query: 186 PIPLV--------LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA 237 + L+ L + R+M + T +A ++ L A++ V AG+GVT Sbjct: 181 TVHLIDLRNDQFVLFPEGFVLREMAIDTCKQAGFAPLVSTEGEDLDAIKGLVSAGMGVTL 240 Query: 238 RPVEMMSPDLRV--LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQY 293 P + + P + T ++ A Y+ + + + + Sbjct: 241 LPESTFAETTPRFTVKIPIEFPQVKRTVGIIKPKNRELAPSANDFYEFVIQFFSKLEQ 298 >UniRef50_B7KZZ4 Transcriptional regulator, LysR family n=11 Tax=Bacteria RepID=B7KZZ4_METC4 Length = 289 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 78/288 (27%), Positives = 137/288 (47%), Gaps = 1/288 (0%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + NL++D +R+F+AV + +F AAA + QS VS + RLEQ +G+ L R L Sbjct: 1 MSNLNVDQIRSFLAVLESGSFTAAAQTLGLQQSTVSGHIARLEQALGRSLLMRDTHRVAL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G ++G+AR +L +D + L+G + +G S++ + L +L R + +P Sbjct: 61 TPDGQAMIGFARDVLEAHDRLRAFFSPGGLRGRIRLGVSEDYTLSALAQVLARFADGHPS 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + L + V + + + ++ E+D++ R + W + P+ Sbjct: 121 VDLQLTVGLSRALYQGYDAGELDVIFCKRRRGDPRGELAWAEELIWVGRPGFAPDPALPL 180 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PLVL PS R + L L A WR+A + +L +RAAV+AGLG+ ++ P L Sbjct: 181 PLVLYPPPSITRTLALDALEAAGRSWRIACTSGSLMGLRAAVEAGLGIAPHSAQVTPPGL 240 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSP 295 + GLPP+ + E+++ + A + A+ + Q P Sbjct: 241 APIPETAGLPPIGEVEFVVLGSGRQH-PAATALQDAILASTAELQAVP 287 >UniRef50_B9Z2V3 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z2V3_9NEIS Length = 295 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 92/297 (30%), Positives = 139/297 (46%), Gaps = 11/297 (3%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 ++LD LLR FV+V + AA+ + RTQ AVSQQ+++LEQ +G+ L R R LT Sbjct: 3 MDLDTALLRAFVSVVRSGSINRAASRLQRTQPAVSQQIRKLEQQLGQPLLERSPRGISLT 62 Query: 69 EHGIQLLGYARKILRFNDEACSSLMF-SNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 G LL YA ++L D+ L IG ++ T LP +L +SV+P Sbjct: 63 GAGESLLPYAERLLMLTDQLLPGLGSLPTSAQHRRIGIMEDFVGTRLPRVLADFASVHPG 122 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTT-----HRPSAFKALNLRTSPTHWYCAAEYILQ 182 L L V V + + + E+D+MV++ +A L P W+ A L Sbjct: 123 LRLSVTVGLKVELFAAMNAGELDVMVSSPLGDSGPLLKPEAQFLC--PLAWFAARGKPLA 180 Query: 183 KGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEM 242 +PLV+ P +R+ LATLN+A PW + + + +LPA++AAV+AGLGV A + Sbjct: 181 T-TSLPLVIFSAPCSWREQTLATLNRAGQPWHIVFESFSLPAIQAAVEAGLGVAAMLADT 239 Query: 243 MSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM-ESYHNPWQYSPMSA 298 P LPPLP + ++ L+ + P +A Sbjct: 240 -PPANSYCINDGSLPPLPGMPVGVYRQSGDSDPLSGQLAALFCRELGEPVALPATTA 295 >UniRef50_B8G0Z2 Transcriptional regulator, LysR family n=4 Tax=Firmicutes RepID=B8G0Z2_DESHD Length = 303 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 62/297 (20%), Positives = 122/297 (41%), Gaps = 17/297 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + ++ L F VA+ +F+ AA + +Q AVS ++ LE G +L R ++ LT Sbjct: 1 MIIETLEIFRKVAEEKSFSKAAEDLFLSQPAVSSHIRNLENEFGTKLIYRSSKHVDLTPA 60 Query: 71 GIQLLGYARKILRFNDEACSSLM--FSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L A +I+ EA + S + G L IGAS + ILP L+++ + YP L Sbjct: 61 GEILYEQACRIINQYQEAKEKINQIQSIVSGNLRIGASFTIGEYILPELVSQTARRYPNL 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFK--ALNLRTSPTHWYCAAEYILQKGEP 186 ++V + +A+ L +D+ + + + + + L K + Sbjct: 121 NINVTIGNTEEIAQGLRQNRLDVALVEGKITGKEFILEPFMVDEMVLIALPSHPLAKIKG 180 Query: 187 IP--------LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + +L + S R+ + IP + +Y S+ V+AAV +GLG+ Sbjct: 181 VTAQDLEDQVWILRETGSGTREFSDRFIETLKIPVKHSYGFSSNTGVKAAVLSGLGIALV 240 Query: 239 PVEMMSPDLR-----VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNP 290 ++ +++ ++ + LP L + + + ++ + Y Sbjct: 241 SKLIIQKEIKAGEIAIIPLEENLPRLSREFLIARGQQTYFTKASEAFLMELSHYSQD 297 >UniRef50_A6UJN8 Transcriptional regulator, LysR family n=5 Tax=Alphaproteobacteria RepID=A6UJN8_SINMW Length = 285 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 82/280 (29%), Positives = 132/280 (47%), Gaps = 4/280 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDL LL TFV A + +A A V RTQSAV+ QMQRLE+++G L R G LT Sbjct: 5 LDLRLLITFVHAAHSGSLSATAVQVGRTQSAVTMQMQRLEEMLGHSLLHRSGSGVRLTGS 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G + L YA +IL+ +DEA S+ L G + G+ ++ + P LL S YP + + Sbjct: 65 GERFLVYAERILKMHDEAVSAFSDKGLHGSMVFGSPEDYLISFFPMLLRSFGSKYPDVEI 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCA-AEYILQK-GEPIP 188 V + +L+S++VDL + + +RT P W + L G+ +P Sbjct: 125 KVVSAPTVELRTLLQSRKVDLALVSTPNLNDVENIVRTEPLVWVGSKPTLELHDFGDAVP 184 Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L L + L + A + +++AY +++L + ++GL ++ E + PDL Sbjct: 185 LALPASNAMDHRAALQAMGGAGLRYKIAYASNSLAGLIGLARSGLAISVMTQEAVPPDLH 244 Query: 249 VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYH 288 VL+ LP LP ++ + + + S Sbjct: 245 VLNAP--LPQLPHLGIMIACADADQSPAVAAFADHIRSVL 282 >UniRef50_Q3J596 Transcriptional regulator, LysR family n=37 Tax=Rhodobacterales RepID=Q3J596_RHOS4 Length = 322 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 79/282 (28%), Positives = 124/282 (43%), Gaps = 2/282 (0%) Query: 4 ANRPI-INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHG 62 +R + NLDL LR+FVAVAD AA + TQSAVS Q++RLE+ + L R Sbjct: 8 RSRDMPRNLDLTALRSFVAVADAGGVTRAAGFLNLTQSAVSMQIKRLEETLDLALLDRSA 67 Query: 63 RNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVS 122 R LT G QLLGYAR +L NDE L + +G + +G + +P +L R S Sbjct: 68 RRVALTAAGEQLLGYARWMLALNDEVFGRLTHDDFEGEVVLGVPHDIVYPAIPQVLQRFS 127 Query: 123 SVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQ 182 + +P++ + + + E D+++TT L P W A Sbjct: 128 AEFPRMRVTLLSSYTRKLKSQFARGECDVIMTTEDTVEPGGETLVELPLVWVGAPGGQAW 187 Query: 183 KGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEM 242 K P+ L + FR V + L+ A IPW +A + + + A+V A L V Sbjct: 188 KQRPLRLA-FEPNCIFRMGVQSALDAAGIPWTMAVESDSSRTIEASVSADLAVHVSLAGA 246 Query: 243 MSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 + + LP L ++ L ++ + + + + Sbjct: 247 EPRYMERIPHGGTLPDLETSKVNLYVADPVHSPAVEGMAELI 288 >UniRef50_A9WGB3 LysR substrate-binding n=2 Tax=Chloroflexus RepID=A9WGB3_CHLAA Length = 304 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 64/304 (21%), Positives = 118/304 (38%), Gaps = 12/304 (3%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L LR F+AVA+ AA + +Q A+SQQ++ LE+ +G LF R GR LT Sbjct: 1 MELRQLRYFLAVAEEGHITRAAEKLYISQPALSQQIKLLEEEIGTVLFDRIGRRIRLTAA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L+ +AR+ L+ EA ++ +G+L IG ++P L+ ++ YP + Sbjct: 61 GEILVAHARRALQELSEAQVAIDELNGLQRGMLRIGVVQTVNAYLMPDLVAAFTNAYPAI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPS--AFKALNLRTSPTHWYCAAEYILQKGEP 186 +L + + + L ++ + + P L + + ++ Sbjct: 121 SLQIEELATRDIEQRLADGDLQIGIGFVPPETAGVTGEELFSEDLVVVVSRQHPWADLPQ 180 Query: 187 I--------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + PL+LL R + + A I R+ +T+ ++ AAV+ T Sbjct: 181 LPVQSLHQQPLILLSTTFCTRRLWDRCTHIAGIQPRVQIEMNTIGSILAAVRQLTLATVL 240 Query: 239 PVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSA 298 P ++S ++ P T LL + + + W A Sbjct: 241 PAMVLSGQPDLVGIPLVDPTPRRTVGLLFRHNAYRCAATRAFVAMTRAKLRVWASRQEIA 300 Query: 299 PEGD 302 Sbjct: 301 HSPG 304 >UniRef50_Q5X4A2 Hydrogen peroxide-inducible genes activator n=4 Tax=Legionella pneumophila RepID=Q5X4A2_LEGPA Length = 296 Score = 249 bits (638), Expect = 6e-65, Method: Composition-based stats. Identities = 67/287 (23%), Positives = 125/287 (43%), Gaps = 13/287 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L FV +AD+ F AA +Q +S Q+++LE+ +G LF R + LLT+ Sbjct: 1 MNLRDLHYFVILADVKHFGEAAKRCFVSQPTLSMQIKKLEEELGVVLFERTNKQVLLTDQ 60 Query: 71 GIQLLGYARKILRFNDEA--CSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G +LL RKIL DE + G L +G + +LP ++ + + YP+L Sbjct: 61 GSKLLDRTRKILILIDEMKELARQSEDPFTGELRLGVIPTVSPYMLPLVMPELKNEYPRL 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHR-PSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + + + + LE E+D+ + F L ++ CA + L + + + Sbjct: 121 KVWLIEDKTHRLITKLEQGELDVAIMALPIDKRFSCQILYEEKFYFACANTHPLAQAKSV 180 Query: 188 --------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARP 239 P++LL++ R+ +A A + A++L +R V+AG+GVT P Sbjct: 181 NINDLKNQPIMLLEEGHCLREQAMAVCQLAKADDIADFTATSLETLRLMVQAGMGVTLLP 240 Query: 240 V-EMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELA-QVIYQAM 284 ++ L + P P L + + ++ + + + Sbjct: 241 ALSTLTASTNHLKCIPFSEPAPSRILGLFWRAGTPRQVCFNAVAELI 287 >UniRef50_Q0BQ99 Transcriptional regulators, LysR family n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BQ99_GRABC Length = 300 Score = 249 bits (637), Expect = 9e-65, Method: Composition-based stats. Identities = 90/291 (30%), Positives = 142/291 (48%), Gaps = 8/291 (2%) Query: 1 MISANRPIIN---LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKEL 57 M+ +P +N LDLDLLR F VA F AA + TQSA+S +++RLE L+ + + Sbjct: 1 MLPQEQPEVNYPDLDLDLLRCFACVAAERGFTAAGQVMGLTQSAISLKIKRLEDLINRRV 60 Query: 58 FARHGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFL 117 F R R+ LT G LL YA ++L NDEA L+ S ++G L +G +D L + Sbjct: 61 FDRSSRHLALTPDGDILLAYAHRLLSLNDEAVRRLVASPIKGHLRLGVADHFLPHHLAQI 120 Query: 118 LNRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAA 177 + R YP + L++ V R A + + DL++ R + + T W A Sbjct: 121 VGRFQRTYPAVRLEIEVGRCAELRTACDEGRFDLVIGRRRAGDTMGMPIWTETMVWVAAN 180 Query: 178 EYILQKGE-PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 ++ + + + P+PL L FR+ L L++A IP L Y +++L + A + GL + Sbjct: 181 DFRMPERDKPLPLATLSTGCMFRERALDVLSRARIPHELRYTSTSLLGIIAFAQEGLCII 240 Query: 237 ARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNN-ELAQVIYQAMES 286 + L+ + D LP L ++E + D S N ELAQ + Sbjct: 241 PIGRSNVPSGLKEI---DSLPVLGNSEIAVFGDISDENLELAQPLIDLFRD 288 >UniRef50_A4WYH8 Transcriptional regulator n=11 Tax=Alphaproteobacteria RepID=A4WYH8_RHOS5 Length = 288 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 83/287 (28%), Positives = 137/287 (47%), Gaps = 1/287 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDL LR+F+AV D +F+ AA + QS VSQ ++RLE +G+ LF R T Sbjct: 2 LDLGQLRSFLAVHDTASFSLAATRLGLAQSTVSQHVRRLEDHLGRRLFDRDTHRVAPTAA 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LL AR +L +D + + S L+G L G S++ + LP +L S+ P + L Sbjct: 62 GEMLLAEARALLEISDRLEAQFLQSRLRGRLRFGLSEDMVNGPLPSILRGFSAANPSVDL 121 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 ++ V +A + E +DL++ R + + P W ++ + P+PL+ Sbjct: 122 ELTVALSAALFAEQEMGRIDLVLAKRRLGDDRGHVVAREPLVWLARDPDLVARWRPLPLI 181 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 PS R L L +A +PW ++ S+L + AA +AG+GV +P + LR + Sbjct: 182 SFPAPSITRAAALDALEQAQLPWLISCTCSSLSGLTAAARAGMGVFVQPRGLTPEGLREV 241 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMS 297 D LPPL E++L ++ L + + + +P + Sbjct: 242 P-ADMLPPLETVEFVLVERRGADRALMAALTREILRQTGRQPPAPAA 287 >UniRef50_C0CUF5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUF5_9CLOT Length = 302 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 58/302 (19%), Positives = 125/302 (41%), Gaps = 13/302 (4%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +++ L LR F+ V + + AA + Q +VS ++ +E+ G +LF R + LT Sbjct: 1 MDVTLRHLRIFLTVCEAGSMTGAANRLFTAQPSVSLAIREMEEYYGVKLFDRISKKLFLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 E G Q+L YAR I+ DE + ++ G L +GAS +LP + ++ +YP+L Sbjct: 61 EAGHQVLEYARHIIALFDEMEQEVRNPDMSGTLRVGASITVGTFLLPGYVKELTRLYPEL 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSA--FKALNLRTSPTHWYCAAEYILQ---- 182 ++ R++ + + + + S E+DL V + + + + C + Sbjct: 121 RVEARIENSNNIEKCVLSNEIDLGVIEGIAHSRYISSESFHGDRLAFVCPPGHRFAGKQD 180 Query: 183 ----KGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + +L + S R++ ++ R+A+ +++ A+ V AG G++ Sbjct: 181 VKLGDLQSESFILREKGSAGREIFDGLAAAHELDIRIAWQSTSNQAIIHGVAAGFGLSVL 240 Query: 239 PVEMMSPDLRVLSGVDGLPP---LPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSP 295 P + + + S + + ++ + A+ + + + P Sbjct: 241 PASLAAEGVERGSIAEFSVEGLSMERKFCVIYHKNKFLARGARELIRLFKEGGERKLPLP 300 Query: 296 MS 297 Sbjct: 301 PV 302 >UniRef50_Q48I21 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=Q48I21_PSE14 Length = 297 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 79/283 (27%), Positives = 132/283 (46%), Gaps = 2/283 (0%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + +LD D L FVAV D F A + +TQ+AVS + RLE VG++L R R L Sbjct: 1 MRHLDTDCLAAFVAVIDCGGFTTAGERIGKTQAAVSLMLGRLESRVGRKLLERSRRGVTL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 TEHG +L+GYAR+I DEA ++L + IG D+ +++ L+ + +P Sbjct: 61 TEHGERLIGYARRIQMLEDEALAALDCGQEATRVRIGMPDDYLESLGCELMQAFTLRHPH 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 L +++ ++ + M+ +DL + T + + LR P W A + ++ + + Sbjct: 121 LQVEIICDFSSRLESMITEGSIDLAIITRSGTKVQGELLRCEPMLWCAAPGHFPEQQKVL 180 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL L + R ++ L+ PWR+ +S LP V +V+ G VT P ++ Sbjct: 181 PLSLFTESCRARPQIIEALDMLGTPWRVVSSSSHLPGVMHSVRLGTSVTVLPASVVPSGW 240 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNP 290 R+L + LP LP E L + + + + Sbjct: 241 RILKS-EQLPRLPSIELELLVPEHALLN-TRRLAHFVRDCFQA 281 >UniRef50_A6VV39 Transcriptional regulator, LysR family n=6 Tax=Gammaproteobacteria RepID=A6VV39_MARMS Length = 295 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 63/296 (21%), Positives = 120/296 (40%), Gaps = 13/296 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D+ LR F+A+A +F AA + Q AVS +++LE +G L R RN LT+ Sbjct: 1 MDIKPLRYFIAIAKTESFTKAAQQLGVAQPAVSMAIKKLEADLGLTLIHRADRNIGLTDE 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G +LL +A KI++ D+A + QG + +G P +L YP + Sbjct: 61 GKKLLIHAEKIIQATDDALLEMSELKGLSQGEVRVGIPSMLGSYYFPPILMAFRHKYPTI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHR--PSAFKALNLRTSPTHWYCAAEYILQKGEP 186 L V + +MLE+ E+DL V P + L A ++ + E Sbjct: 121 TLKVIEGGTWQLQKMLENGELDLSVIVAETLPDGLETQALIREEMLVTIATDHPFSQLEK 180 Query: 187 IP--------LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 I LV+ + R +V ++ + + +P +++ + G G++ Sbjct: 181 ISPEAFFDEELVMFKEGYFHRRIVDKLAKACKKTPKIGFETNLIPLIKSITQQGFGISTL 240 Query: 239 PVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYS 294 ++ D +++ PP+ + S ++ + + + + + S Sbjct: 241 LAMVIEEDDDLIT-RSFDPPIWLDLGIAWRKDSYLSKANRAFLEFVNEHGRYKRRS 295 >UniRef50_C8W3M6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W3M6_DESAS Length = 293 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 64/289 (22%), Positives = 117/289 (40%), Gaps = 17/289 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +++ L+ FV VA ++F AA + QS+++ Q+ LE + +LF R GR LT++ Sbjct: 1 MEIRQLKAFVTVAKQHSFTRAAELLDYAQSSITAQVSALENKLNTKLFERLGRQVTLTQN 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNL-QGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL YA KIL+ N EA + S + +G L++GA + S LP LL ++P + Sbjct: 61 GEKLLPYAEKILKLNSEAIELVSSSPVPRGSLSVGAMETSCIYRLPKLLQEYRKLFPNVD 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRP---SAFKALNLRTSPTHWYCAAEYILQKGEP 186 L + + L+ ++D+ T + + L P AA + L K P Sbjct: 121 LTLVNGYPEELIHSLKENKIDVAFFTGQEITNPDLVSETLLDEPIVLVSAAGHPLSKKAP 180 Query: 187 I--------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + +VL +R + I + + + V GLG+T Sbjct: 181 VITLDLQGETIVLCS--CCYRATLRKIFENKGIQVGSILKFANIEVRKRCVINGLGITIL 238 Query: 239 PVEMMSPDLR---VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 P + +L ++ + + + + + + Sbjct: 239 PRVTVEAELNQGTLVDLGWNSSDFNIITQVAYHKDKWVSPVLRSFLELA 287 >UniRef50_A1VNR0 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=A1VNR0_POLNA Length = 305 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 67/303 (22%), Positives = 114/303 (37%), Gaps = 18/303 (5%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + L ++TFV VA + + AA + TQ AVS Q+++LE G L GRN L Sbjct: 3 MRPYTLKQMQTFVEVARQRSVSKAAERLFVTQPAVSMQIRQLEDAFGLPLIEPLGRNIQL 62 Query: 68 TEHGIQLLGYARKILRFND--EACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVY 125 T G LG+A L EA + +G + + A +P LL R ++ Sbjct: 63 THAGEAFLGHAIAALGQFKDLEALMAEHVGMKKGRIDLAVVST-AKYFVPMLLVRFRKLH 121 Query: 126 PKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKAL--NLRTSPTHWYCAAEYILQK 183 P + + +R+ + M+ E DL+V P T+P A ++ L + Sbjct: 122 PGIDIQLRIDNRENILGMMARYEADLVVMGRAPGNLDCEATPFATNPLSIVAAPDHALVR 181 Query: 184 GEPIP--------LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGV 235 + +P V+ + S R + P + + ++ AV AG+G+ Sbjct: 182 RKTLPFSALGEHGFVVREQGSGTRAAMERLFADQKTPLNVVMEMPSNETIKQAVMAGMGL 241 Query: 236 TARPVEMMSPDLR----VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPW 291 + M +L L ++G P L Y+ + A + + Sbjct: 242 SFLSRRTMRHELAHGYIALVDIEGTP-LVGNWYITHLSQKKLSPAALAFKEFLVEQGGAL 300 Query: 292 QYS 294 S Sbjct: 301 MDS 303 >UniRef50_C6D4H5 Transcriptional regulator, LysR family n=4 Tax=Bacillales RepID=C6D4H5_PAESJ Length = 303 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 68/298 (22%), Positives = 128/298 (42%), Gaps = 22/298 (7%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 + L+ L F VA+ +F+AAA ++ TQ AV+ Q+Q LE G +L R + LT Sbjct: 1 MALNFHQLHIFYTVAERGSFSAAAQSLHMTQPAVTMQVQSLEDYFGTKLLQRSTKRIDLT 60 Query: 69 EHGIQLLGYARK---ILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVY 125 E G L+ YAR+ ++R D+A S+ L+G L +GAS + ILP LL + Sbjct: 61 EAGKALMPYARRSIELIRDTDQAMSAFTK-QLKGRLQLGASLTIGEYILPRLLGPFGQTF 119 Query: 126 PKLALDVRVKRNAYMAEMLESQEVDLMVTTHRP--SAFKALNLRTSPTHWYCAAEYILQK 183 P++++ ++V A + E + + ++ + + + + ++ L K Sbjct: 120 PEISISMKVMNTAQIIEEIINHQLTFGLIEAPVNHPDMQMEAVMSDELKLIVPKDHPLSK 179 Query: 184 GEPI--------PLVLLDDPSPFRDMVLATLNKADIPW---RLAYVASTLPAVRAAVKAG 232 + + P V+ + S R ++ L + I ++ + AV++AV+AG Sbjct: 180 RQKVLLDEVADYPFVVREQGSGTRLVMEEQLKRKKIDPADLKIVMELGSTGAVKSAVEAG 239 Query: 233 LGVTARPVEMMSPDLRVLSGVDGLP----PLPDTEYLLCYDPSSNNELAQVIYQAMES 286 LGV+ + ++ L + +P Y + + A + Sbjct: 240 LGVSFVSESSVKHEVA-LGLLHVIPIEDTRFKRQFYSIYLKSTLLPISAVTFLTFLRE 296 >UniRef50_B9ITM1 Transcriptional regulator, LysR family n=71 Tax=Bacillus RepID=B9ITM1_BACCQ Length = 297 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 111/294 (37%), Gaps = 16/294 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +++ L TF AD F A + QS+V+ Q++ LE +G LF R G+ LTE Sbjct: 1 MEIKQLITFKIAADTLNFTQTAKKLNFAQSSVTAQIKTLEAELGTPLFERLGKRLFLTEA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFS-NLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G + YA KI+ ++EA +++ + G LTIGA + LP +L R + +P++ Sbjct: 61 GRKFQLYADKIIVLSNEAKTAVKDDEEIAGTLTIGAQESQCTYRLPSILKRFKAQFPQIK 120 Query: 130 LDVRVKRN-AYMAEMLESQEVDLMVTTHR---PSAFKALNLRTSPTHWYCAAEYILQKGE 185 L + + E L +VDL A L A + L + Sbjct: 121 LIFKPAHSNKDAKEQLMEGKVDLAFILDECKTEDALHVEPLMKEELKVVAAPGHHLLQQT 180 Query: 186 PIPL--------VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA 237 + + +L + +R + D+ ++ A++ V A LG+ Sbjct: 181 SVSIKDLETETLLLTELGCSYRTLFEELFRIQDVYPANKIEFVSVEAIKQCVIADLGIAV 240 Query: 238 RPVEMMSPDLRVLSGVDGLPP---LPDTEYLLCYDPSSNNELAQVIYQAMESYH 288 P ++ D+R + + P + + Q + Sbjct: 241 LPAIVVEKDIREGTIKELHLENTINPIFTQIAWHKDKWMTVPLQQFIDVTREFF 294 >UniRef50_A3JDH1 Probable transcriptional regulator n=1 Tax=Marinobacter sp. ELB17 RepID=A3JDH1_9ALTE Length = 287 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 88/280 (31%), Positives = 139/280 (49%), Gaps = 2/280 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDL++LRT VA+AD + AAA + TQSAVS Q++RLE + L GR LT Sbjct: 6 LDLNMLRTLVAIADAGSVTAAAERLAYTQSAVSMQLRRLEASLDVALHEPEGRKIRLTAE 65 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +L+GYARK+L N EA + + G L++G ++ A +L +L+ S YP + L Sbjct: 66 GQKLVGYARKMLALNSEAVDDVQRRQVSGELSLGIPEDYA-FLLTSVLSHFSQRYPAIQL 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 V + + + + ++ +D+ V T + + +R P W A +PIPL Sbjct: 125 QVICRSSVDLVKQVQDGGLDMAVVTRQVRSPGGEVIRREPLVWAVGATAQPSLADPIPLA 184 Query: 191 LLDDPS-PFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 L + FRD+ A+L A WR+AY + ++ + V AGL V M++ LRV Sbjct: 185 LYSPGADVFRDVAEASLAAAGRSWRMAYSSQSMTGLLPVVVAGLAVVVVTRNMLTDQLRV 244 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 + G+P L E L +E A+ + + ++ Sbjct: 245 IDERSGMPALQSVEIALHRSIGRPSEPARQLADLIRTHLA 284 >UniRef50_Q1K251 Transcriptional regulator, LysR family n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K251_DESAC Length = 283 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 120/280 (42%), Gaps = 6/280 (2%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++++ L+ F+AVA + + AA + QS V+ ++++LE+ G+ LF R + LT Sbjct: 1 MEINELKIFLAVARQGSISRAAEELNYVQSNVTTRIKQLEERFGRPLFHRKSKGVCLTAS 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNL-QGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G+ L YA++I++ EA +L + + QG L I + + +A LP LL YP++A Sbjct: 61 GLILCDYAQRIIQLTGEAHDALSENAVPQGPLAISSMETTAAVRLPSLLADYHRRYPQVA 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHR--PSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 L++ +A + L +VD P A ++ + + E + Sbjct: 121 LNLVSAPSAESLKKLLDYQVDGAFIAGEVDPQAIESCEVFEEELVLVAPLDIDPLTMESL 180 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMM-SPD 246 +++ +R + L + + ++ + A V AG+G++ P ++ P Sbjct: 181 KILVFRPGCSYRARLENWLRQNGRLGYHSVELGSIEGILACVAAGMGISILPRSVVERPH 240 Query: 247 LRVLSGVDGLPPLPDT--EYLLCYDPSSNNELAQVIYQAM 284 L + LP + + QV + + Sbjct: 241 LMQNCALHELPEPVRRMTTRFVWRRHEKPSTALQVFRELL 280 >UniRef50_Q67SW7 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67SW7_SYMTH Length = 305 Score = 247 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 56/296 (18%), Positives = 117/296 (39%), Gaps = 17/296 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D+ L F +A +F AA + TQ +V+ ++Q LE+ +G++LF R R LT+ Sbjct: 1 MDVQGLEAFWWIAKTGSFNRAAERLFLTQPSVTARIQALEKELGQQLFERRPRGVRLTDA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LL +A ++L+ A +++ + G L++G++ ++ +LP +L R YP + Sbjct: 61 GRALLPHAERVLQDIKRARQAVLDLQTASGGTLSVGSALTTSAYLLPDILLRFKRGYPNV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKAL---NLRTSPTHWYCAAEYI----- 180 + V R+ + +++ V + + + + L P ++ Sbjct: 121 EVLVHTGRSHQVQQLVLDDTVQVGLVHAPLPSHAEIVSYPLSEEPILLVVPPDHPVARHS 180 Query: 181 ---LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA 237 L + + D S + +V + ++ A + V GLG+T Sbjct: 181 EVTLDELTQESFITTDRASGYWALVEQWWASQGFVPHITMELDSIEAAKRMVLCGLGLTM 240 Query: 238 RPVEMMSPDLR----VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 P + ++ V + L L+ + A+ + +E Sbjct: 241 LPYSTVKSEIELSQVVAVPLANSATLKRQNILIHRRGKIWSGTAKAFLRVLEEMFQ 296 >UniRef50_A0LJJ0 Transcriptional regulator, LysR family n=2 Tax=Bacteria RepID=A0LJJ0_SYNFM Length = 308 Score = 247 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 68/303 (22%), Positives = 123/303 (40%), Gaps = 15/303 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L+TF VA+L +F AA + QS++S Q+Q LE+ +G +LF R G+ LTE Sbjct: 1 MELRQLKTFRVVANLLSFNKAAGQLHYAQSSISAQIQILEEELGVQLFDRLGKRVQLTEA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF-SNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G++LL YA KIL DE S + + G LTI + LP +L S +P++ Sbjct: 61 GVRLLQYANKILDLVDETNSMVNRVNEPTGSLTIRIPETLGVRRLPAVLREFHSRFPRVR 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHR---PSAFKALNLRTSPTHWYCAAEYILQKGEP 186 L+ + + L DL + L P A ++ L Sbjct: 121 LNFITCALEGLDKDLRKGITDLAFLLAESINAADLDMATLGFEPVVLVAAPDHPLAAKRK 180 Query: 187 I--------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + ++L +R ++ L + ++ + S++ ++ V AG+G++ Sbjct: 181 VHTRDLTGSTILLSRVDCSYRKVLEQILEQEEVTRFNRFEFSSVEVIKHCVMAGVGISVL 240 Query: 239 PVEMMSPDL---RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSP 295 P ++ D+ R++ + ++ Y + Q + P Sbjct: 241 PSIAVAEDVARKRMVVLPWSEGGIQVAVLMVWYRERWISPTLQAFMDVTKKVFAQAAEKP 300 Query: 296 MSA 298 A Sbjct: 301 SRA 303 >UniRef50_D1RXQ6 Transcriptional regulatory protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RXQ6_SEROD Length = 330 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 93/277 (33%), Positives = 140/277 (50%), Gaps = 3/277 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + LL +FVAV D +F AA V +QS VSQQ++RLE+++GK LF R LLTE Sbjct: 53 FNPQLLLSFVAVCDSGSFTRAADRVFLSQSTVSQQVRRLEEMLGKPLFERSSHQVLLTEE 112 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G++LL YAR+I+ N+EA +L GVL +G ++ A LL S +P L L Sbjct: 113 GVKLLSYARRIIALNEEAHDALTGIWRDGVLRLGMPEDFAAPT-TELLAEFSRAHPHLRL 171 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 DV +A + +E+DL++ R S R P W + + + P+PL Sbjct: 172 DVASGLSADLHSAYAREELDLILVKQRRSQPP-RAARPEPLLWLDSLAFPAIEQSPVPLA 230 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 + +R+ + L+ WR+ Y +++L A+ AA AGLGVT P P RVL Sbjct: 231 VFPLNGLYREELCQALDNLGKRWRIGYSSASLAALTAASAAGLGVTLLPAGCRLPSHRVL 290 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 +GLPP+ E L Y S+ + + + ++ Sbjct: 291 GIAEGLPPVGSFELALYYRDSAP-AATPALAERLRAF 326 >UniRef50_B0UBR3 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UBR3_METS4 Length = 296 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 86/296 (29%), Positives = 142/296 (47%), Gaps = 6/296 (2%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR-HGRNKL 66 ++N+D+DLLRT +AVAD F A + RTQSAVS Q++RLEQ+VG+ L R GR Sbjct: 3 LVNVDIDLLRTLLAVADAKNFTLAGERLLRTQSAVSLQVKRLEQVVGQRLVERGSGREIR 62 Query: 67 LTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYP 126 LTE G + YA +IL+ ND + VL +G D+ A ILP ++ +S Sbjct: 63 LTEAGEMVRRYAIEILKLNDALVREVAHRPETNVLRVGTPDDYAQLILPEIIGTLSRENR 122 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEP 186 + V + ++ M++S ++DL + T S + + L P W A + Sbjct: 123 HVEFHVVSDLSVNLSRMVDSGDLDLALVT-WASGIQGIRLAEEPLAWVAAPHSAAASLDT 181 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +PL L RDM + L++ WR+A+ A+ +R A+ G + P+ + D Sbjct: 182 LPLALFPQGCRVRDMAVEALDRIGRRWRVAFSANQFTPLRTAITHGEAIGVLPLRAVPKD 241 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPEGD 302 L + GLP LP ++ ++++ +Q + +Q P+++ Sbjct: 242 LVQVGPEHGLPELPCAPLIIKIGRAADDSA----HQLAGAIAYAFQPRPLASAATG 293 >UniRef50_A4A328 Transcriptional regulator, lysr family protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A328_9PLAN Length = 301 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 69/299 (23%), Positives = 122/299 (40%), Gaps = 17/299 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L TF A A +F AAA+ QS+V+ Q+Q+LE+ +G LF R G LTE Sbjct: 1 MELKTLATFRAAAATLSFTQTAAALGYVQSSVTAQVQQLERELGVPLFDRIGNRLALTEA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +L+GYA ++L DEA +++ + G L+I + +LP +L + +P + + Sbjct: 61 GQRLVGYADRLLALADEARAAVSTTAPVGTLSISGPETIVSYLLPSILAKFRQQHPAVWV 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHR---PSAFKALNLRTSPTHWYCAAEYIL------ 181 + + ++D P + LR P A + L Sbjct: 121 RCVPSPIGELKRRVLDGQLDAAFVLEEPVVPGSLNVAPLRPEPLALIAAPSHPLVKKRRV 180 Query: 182 --QKGEPIPLVLLDDPSPFRDMVLATLNKADIPW-RLAYVASTLPAVRAAVKAGLGVTAR 238 + P++ + +R+ L+ A + A S++ A++ V AGLG+ A Sbjct: 181 QARDLAGEPILFTETGCTYRNKFEQALHAAHAHPGQKAQEFSSVEAIKRYVAAGLGIAAL 240 Query: 239 PVEMMSPDLRVLS---GVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYS 294 P + + + + P L L+ + + + PWQ S Sbjct: 241 PSVAVEAERKSRTLAVLAWDGPQLTVHTQLVWSATRWTSPALSAFVETV--MACPWQAS 297 >UniRef50_C5CN69 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CN69_VARPS Length = 300 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 86/291 (29%), Positives = 132/291 (45%), Gaps = 3/291 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD LR FV+VAD + AA A+ TQSAVS Q++RLE+ +G +F R R+ LT Sbjct: 2 LDSQQLRAFVSVADHGSVTRAADAMHLTQSAVSAQIRRLEEQLGCRVFDRTTRSLQLTAQ 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQ-GVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LL YAR IL+ +A S L L +G S+ L L P + Sbjct: 62 GSVLLSYARSILKLQQQAVSRLAAPRHAPATLRLGCSEGFPSEWLFGALAGFRERRPDVH 121 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 +++ + +A+ + +DLMV T + L P W +A+ +L P+PL Sbjct: 122 VEISCGISTMLAKQVRQHSLDLMVGTVCDAGSDTETLWMEPLVWAFSAKALLDPEAPVPL 181 Query: 190 VLLDDPSPFRDMVLATLNKADIP-WRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248 L +P PFR+ LA+L W++ A + A+ AA AGL +T M LR Sbjct: 182 AFLSEPCPFREAALASLAGHGTTHWQIVLTAQSSGALVAAAAAGLAITVLTPSGMPSGLR 241 Query: 249 VLSGVDGLPPLPDTEYLL-CYDPSSNNELAQVIYQAMESYHNPWQYSPMSA 298 + LP LP +++ + + +E + + W+ + A Sbjct: 242 SIPPGSFLPVLPAARFVIQHWKSGTPSEALSALADDVREACFRWRGAHAGA 292 >UniRef50_A8RPQ8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RPQ8_9CLOT Length = 296 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 55/289 (19%), Positives = 119/289 (41%), Gaps = 13/289 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + L+ FV V + + AAA+ + Q ++S + +E G +LF R R LTE+ Sbjct: 1 MTFRHLKIFVTVCETGSMTAAASQLFIAQPSISLAISEMEDYYGVKLFDRISRKLYLTEN 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G + L YAR I+ DE + + G L +G S +LP + ++ YP L + Sbjct: 61 GRRALQYARHIIDLLDEMEQGVRDVDAMGRLKVGTSITIGTYLLPGYIKKLKQQYPALKV 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFK--ALNLRTSPTHWYCAAEY-----ILQK 183 + + + + + + ++D+ + + + + + C A + L++ Sbjct: 121 EASIANSGTIEQQILDNDIDVGIIEGVAHSPFILSESFAGDRLVFICPAGHEFAGKTLEE 180 Query: 184 GEPIP---LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 + +L + S R++ L ++ R + +++ + VKAGLG++ P Sbjct: 181 LSEVRNQDFILREKGSAGREIFDGILAAQELNVRPIWQSASNQVILQGVKAGLGISILPY 240 Query: 241 EMMSPDLRVLSGVDG---LPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 ++ D+R + L ++ + A+ + + + Sbjct: 241 FLVRQDIREGELAEFRIKDLALNRKYSVIYHKNKFLPRSARTLMELCKE 289 >UniRef50_UPI0001B5968A HTH-type transcriptional regulator pecT n=1 Tax=Brucella neotomae 5K33 RepID=UPI0001B5968A Length = 317 Score = 246 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 127/227 (55%), Gaps = 3/227 (1%) Query: 3 SANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHG 62 P+ LD+D+LRTFVA+AD +F++AA AV RT SAVS Q+++LE+ +G +F R Sbjct: 14 PVQHPLPMLDIDVLRTFVAIADTGSFSSAANAVFRTPSAVSMQIKKLEEQLGVAVFDRDA 73 Query: 63 RNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVS 122 R+ LT G LLGYAR++L N EA S + + G++ +G+ D+ + +LP +L R + Sbjct: 74 RSVTLTGDGEILLGYARRLLALNREAVSKFVAPTVTGIVRLGSPDDIGECVLPLVLKRFA 133 Query: 123 SVYPKLALDVRVKRNAYMAEMLESQEVDLMVT---THRPSAFKALNLRTSPTHWYCAAEY 179 +P + +DV + +++ + + L+ + +D+ + P+ + W A Sbjct: 134 ETHPGVTVDVVIDQSSNLRKRLDERRLDVTLVNISQAVPTRDDVEIMLDEELVWARAKCG 193 Query: 180 ILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVR 226 + +P+PL + ++ +R L L K+ P+R+AY++S R Sbjct: 194 TAYRRDPLPLSIWEEGCAWRANALQALEKSGRPYRVAYMSSHSTGQR 240 >UniRef50_A1B0T7 Transcriptional regulator, LysR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B0T7_PARDP Length = 297 Score = 246 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 86/275 (31%), Positives = 134/275 (48%), Gaps = 1/275 (0%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 I NL DLLRTF+ V +L + A AA+ R+Q A+S Q++RLE+LV L + GR L Sbjct: 4 ITNLPTDLLRTFITVVELGGHSRAGAALGRSQPAISLQIRRLEELVRAPLLTQEGRAILP 63 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G LL YAR+++R NDEA S S+ GVL IG + A L L R + + Sbjct: 64 TLAGEALLSYAREMVRINDEAVSYFHRSDKTGVLRIGLPTDYAVAFLQGTLTRYIRGHAE 123 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALN-LRTSPTHWYCAAEYILQKGEP 186 + L+V + + + L S ++D++V + L+ + T W A ++ L P Sbjct: 124 VELEVHCDLSRELHQHLRSDDLDIIVAVMPTARMPYLSRMWTEQPIWAAAEDFQLPAHAP 183 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +PL + +R ++ L+ + WR+ Y + ++ AV+ GL VTA M Sbjct: 184 VPLGAHPEGCDYRARMIQALDAVERRWRIVYTGPGISGLQNAVRNGLCVTALTRATMLSG 243 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIY 281 +R+L+ DG P L L Y + + Sbjct: 244 MRMLTEADGFPALEPLRVGLFYKHPRLSAAGLQLV 278 >UniRef50_Q11NC7 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=Q11NC7_MESSB Length = 303 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 92/292 (31%), Positives = 148/292 (50%), Gaps = 2/292 (0%) Query: 5 NRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRN 64 + N+ DL+R+FV+ D +F AA V RTQSAVS Q++RLE++VG +LF R + Sbjct: 7 RIVVPNIPTDLMRSFVSAIDGGSFTRAAEMVGRTQSAVSLQIKRLEEVVGTQLFQRDAHS 66 Query: 65 KLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSV 124 LT G YAR++L NDE + + + G + +GA E ++LP LL R + Sbjct: 67 LQLTGQGRTFAQYARRMLALNDEVLALMQSPAVSGRVRLGAPSEYTASMLPHLLGRFAQA 126 Query: 125 YPKLALDVRVKRNAYMAEMLESQEVDLMVTTHR-PSAFKALNLRTSPTHWYCAAEYILQK 183 +P + L+V + + ++ E DL+V H A + T P W+ +A++ Sbjct: 127 HPNVMLEVTSDLSENLLTRQQNGEFDLVVALHDNQRAGSGKLIHTEPLVWFTSADHFGHM 186 Query: 184 GEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMM 243 P+PLVL P +R ++L LN+ R++Y++S+ A AAV+AGLGVTA + Sbjct: 187 RSPLPLVLAPPPCIYRKLMLYQLNREAKLCRISYLSSSYTAAIAAVRAGLGVTAMVQSTL 246 Query: 244 SPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNE-LAQVIYQAMESYHNPWQYS 294 D+R+L DGL L E L + + + + + + + Sbjct: 247 PGDVRLLGSPDGLNSLGHLEVRLHRLLAVESAEAIHCLETYIAEHLSQAERP 298 >UniRef50_Q1LFN3 Transcriptional regulator, LysR family n=15 Tax=Burkholderiales RepID=Q1LFN3_RALME Length = 298 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 81/283 (28%), Positives = 131/283 (46%), Gaps = 1/283 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 L+ ++TF VA +F A + +QS+VS ++RLE V + LF R + LT Sbjct: 15 LNPVWIQTFATVATARSFTDAGRQLGLSQSSVSDHIRRLEGSVSRRLFVRDTHSLALTPD 74 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LL +AR IL A S LQG + +G S++ A LP +L + +P + L Sbjct: 75 GEALLVHARLILESLARAESQFSGPRLQGRVRLGTSEDLAQGPLPNVLAAFRATHPDVEL 134 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 ++ + + + E +E+ +DL+V R + + L W ++ +P+PL+ Sbjct: 135 EITIGMTSKLYEWMEAGTLDLIVGKRREGERRGVPLFRGRLEWLARPGTVVDVRQPLPLI 194 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 L+++PS R +VL TL K WR+ +S+ AA + GLG+T R + L Sbjct: 195 LVNEPSVTRSVVLDTLAKNGWRWRVVCTSSSHSGCIAAARGGLGITVRAENLTGGGLVPP 254 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQY 293 D LP LPD E+ + E A + Q + Sbjct: 255 VNFDALPALPDVEF-ITLAARRLTEPADTLLQLIRKSDLRAAR 296 >UniRef50_A1S908 Putative LysR-family transcriptional regulator n=1 Tax=Shewanella amazonensis SB2B RepID=A1S908_SHEAM Length = 307 Score = 245 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 94/284 (33%), Positives = 141/284 (49%), Gaps = 7/284 (2%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD LLR FVAVAD +F AAAA TQS VSQQ++RLEQ +G EL +R GR + T Sbjct: 18 LDPVLLRAFVAVADSGSFTRAAAATHLTQSTVSQQLKRLEQQLGCELLSRKGRYAMPTAD 77 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LLGYAR+IL EA + L L + +++ A T L +L ++ + +P + L Sbjct: 78 GERLLGYARQILALMAEAGMTPAQPPL---LRLAVAEDFAGTALMPILKKLITRFPSVKL 134 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQ-KGEPIPL 189 +V+ + + + + V+L + R A W AA++ GEP+PL Sbjct: 135 EVQSGLSKPLYQAFQEGVVELALIKQRQGEHPAKACWPEALSWLAAADWQAVKAGEPVPL 194 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 + +R+ + L++A IPWRL Y +++L V AV AG+GV+ P + R Sbjct: 195 IAFPAGGLYRNEMAQLLDEAGIPWRLVYSSNSLEGVLCAVAAGMGVSLLPSRFIRA--RE 252 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQY 293 + LP E L S EL Q + + +Y + Sbjct: 253 HREITALPRATAMELALHLASSPGAEL-QWLADEIGAYCDRLSS 295 >UniRef50_D0KYG7 Transcriptional regulator, LysR family n=3 Tax=Gammaproteobacteria RepID=D0KYG7_HALNC Length = 312 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 117/296 (39%), Gaps = 16/296 (5%) Query: 14 DLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQ 73 L+ F VA L +F AA A+ TQ AV+ Q+++LE+ LF R LT+ G Sbjct: 4 RRLKVFNTVARLLSFTKAAEALHTTQPAVTFQVRQLEEHFDTRLFDRTHNRVTLTDVGHV 63 Query: 74 LLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALD 131 + + ++ DE + + G L IGAS A+ +LP LL + + LA+ Sbjct: 64 VYEISERMFELYDEMDRRVKEMTGEVGGSLNIGASTTIAENMLPALLGKFRLKHRDLAVR 123 Query: 132 VRVKRNAYMAEMLESQEVDLMVTTHRPS--AFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 ++V + M+E VDL + R ++ L E + L Sbjct: 124 LKVGNTEAIVSMVEHNVVDLAIVEGTVGNKNLLVETCRRDELVVILPPDHQLAGLESVSL 183 Query: 190 --------VLLDDPSPFRDMVLATLNKADIP--WRLAYVASTLPAVRAAVKAGLGVTARP 239 + ++ S R+MVL L + W + + A++ AV+AG+G++ Sbjct: 184 DQLMSYDFICREEGSGTREMVLNYLIEHGYSDGWDVCMELGSPEAIKGAVQAGMGLSIMS 243 Query: 240 VEMMSPDLR--VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQY 293 ++ +L+ +L V P L + + + + Y + Sbjct: 244 ASGITKELKLGLLKAVPLSPRLFRDFSFVRQRHKFRLPAMEDLLEFSRDYCSNSSP 299 >UniRef50_P42722 HTH-type transcriptional regulator cfxR n=9 Tax=Betaproteobacteria RepID=CFXR_RALEH Length = 317 Score = 244 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 62/297 (20%), Positives = 110/297 (37%), Gaps = 16/297 (5%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + L L L+ FV VA +F AA + TQ AVS Q+++LE +VG LF R L Sbjct: 5 LRALTLRQLQIFVTVARHASFVRAAEELHLTQPAVSMQVKQLESVVGMALFERVKGQLTL 64 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVY 125 TE G +LL +A +IL +A L QG +TIG + P LL ++++ Sbjct: 65 TEPGDRLLHHASRILGEVKDAEEGLQAVKDVEQGSITIGLIST-SKYFAPKLLAGFTALH 123 Query: 126 PKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKA--LNLRTSPTHWYCAAEYILQK 183 P + L + + +L+ +DL + P A + P + + L Sbjct: 124 PGVDLRIAEGNRETLLRLLQDNAIDLALMGRPPRELDAVSEPIAAHPHVLVASPRHPLHD 183 Query: 184 --------GEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGV 235 +L + S R + + ++ AV AG+G+ Sbjct: 184 AKGFDLQELRHETFLLREPGSGTRTVAEYMFRDHLFTPAKVITLGSNETIKQAVMAGMGI 243 Query: 236 TARPVEMMSPDLRVLSGVDGLP---PLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 + + + +LR P+ ++ + ++ + + Sbjct: 244 SLLSLHTLGLELRTGEIGLLDVAGTPIERIWHVAHMSSKRLSPASESCRAYLLEHTA 300 >UniRef50_A4XTW7 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas mendocina ymp RepID=A4XTW7_PSEMY Length = 309 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 67/300 (22%), Positives = 119/300 (39%), Gaps = 18/300 (6%) Query: 1 MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR 60 M + L TF+AVA+ + AA + Q +VS Q+ +LEQ + ELF + Sbjct: 1 MNKSRFHTRQTTFRQLETFLAVAEHLSVTEAARTLHLAQPSVSTQLAKLEQALQMELFEQ 60 Query: 61 HGRNKLLTEHGIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLL 118 G+ LT+ G ++ AR+I D L G L +GA A ++P LL Sbjct: 61 LGKRLYLTDAGREVQAGAREIFDALDRLEMRLAQLNGLTTGQLRLGAVTT-AKYLVPRLL 119 Query: 119 NRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPS--AFKALNLRTSPTHWYCA 176 YP++ + + + + + LE DL V + P + + L +P Sbjct: 120 GPFCRQYPQVEVQLNIANRSDVIRCLEDNRDDLYVFSQPPDHLDLECVALAENPLVVIAP 179 Query: 177 AEYIL-------QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAV 229 A + L ++ P + + S R + + P++ ++ A++ +V Sbjct: 180 AGHRLSGQRIRWEQLAQEPFLSREPGSGTRLAIEDHFARHGWPYKPHMTIASNEAIKESV 239 Query: 230 KAGLGVTARPVEMM----SPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 AGLG+ + +L L D P+ + YL+ + + + AQ E Sbjct: 240 AAGLGIAILSRHTLIHTAVGNLVELDVEDF--PIANQWYLVRWRRKALSPAAQAFSSFAE 297 >UniRef50_B4E8W5 LysR family regulatory protein n=25 Tax=Burkholderia RepID=B4E8W5_BURCJ Length = 310 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 84/285 (29%), Positives = 126/285 (44%), Gaps = 3/285 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD+ LLRTF+ V D FA AA + T SAVS ++RLEQ G L AR R LT Sbjct: 24 LDIALLRTFLEVVDRRGFAPAAERLALTPSAVSGHIKRLEQAAGTVLLARTTRRIALTPA 83 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L YAR I+ E + L + G L +GAS++ A LP +L +P ++ Sbjct: 84 GDTLYAYARNIVDMEREVRARLRGAPAHGPLRVGASEDFAGAWLPHVLRTFRDRHPHTSI 143 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTH-RPSAFKALNLRTSPTHWYCAAEYILQKGEPIPL 189 +++V A + +D++ R L P W AA+ L G +PL Sbjct: 144 ELKVGITASLLREQMLGRLDVVFGKQCRQVDAPGELLWEEPLVWAFAADRPLDAGGEVPL 203 Query: 190 VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRV 249 L P +R+ +A L A P+R+ + + ++ +A AG VTA + LR Sbjct: 204 ALFPQPCVYREAAVAALAAALRPFRVLFESGSMAGCVSAALAGFAVTALARSQLRDGLRE 263 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYS 294 DGLP LP + A + +A+ +++ Sbjct: 264 CGPQDGLPALPAARFHAFAAKPDGPGAA--LIEAVRDIGRDRRFA 306 >UniRef50_A0KR40 Transcriptional regulator n=5 Tax=Gammaproteobacteria RepID=A0KR40_SHESA Length = 282 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 78/279 (27%), Positives = 141/279 (50%), Gaps = 1/279 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++++ LR+FVA D +F AA +TQSAVS QM+RLEQ +GK LF + GRN +L+ Sbjct: 1 MEIEALRSFVAFVDTGSFTRAAMQTYKTQSAVSMQMKRLEQELGKTLFVKEGRNLVLSTE 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G + YA+++L+ +DE +++ + + L +G D+ A+++LP ++ + +L L Sbjct: 61 GQRFGLYAKQLLQLHDETVTTIKQTQVGAQLHLGCPDDYAESVLPRIVALLHGHIKQLDL 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 + + + ML+S ++D + T P + + L+TS W A+ L +P+P+ Sbjct: 121 QITCASSQKLRIMLDSGQLDAAIVTRLPESDEGYLLQTSKGVWVSASGSNLSDADPLPIA 180 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 L F L L K D ++L +S+ A+ A V L ++A +S L ++ Sbjct: 181 LFQKDCKFHIAALDGLMKQDRHYQLLACSSSAAALNAIVAKNLAISAMAECSVSAPLNII 240 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 LPPLP L + + + + + + + Sbjct: 241 DSG-TLPPLPVVAVALVISAKAYSPINAELAKQIAQAYQ 278 >UniRef50_C0ZCK2 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZCK2_BREBN Length = 295 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 55/291 (18%), Positives = 128/291 (43%), Gaps = 14/291 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L +R +AVA+ +F+ AA + Q ++SQQ+ +LE+++G LF R ++ LT+ Sbjct: 1 MELRQIRYVLAVAEERSFSRAANRLHLAQPSLSQQIAKLEKILGVSLFHRLPQHVELTDA 60 Query: 71 GIQLLGYARKILRFNDEACSSLM--FSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G + + A+ ++ ++ + G L +G+ + +LP +L + +P + Sbjct: 61 GQRFIQVAQTLVDMSEGLEREMRAYAVGESGKLLVGSLPITGAYVLPRVLPTFTKQFPGV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHR--PSAFKALNLRTSPTHWYCAAEYILQKGEP 186 L + + ++++ ++L ++D+ + T + + + A + L K + Sbjct: 121 ELQLMEETSSHLEQLLVRGKIDVSLLTMPISDPSLEIIPAINEEIFLAVPANHPLAKRKE 180 Query: 187 I--------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + P +LL + FR + L +A R+ + +S + ++ V AG+G++ Sbjct: 181 VDLAEVADQPFILLKEGQGFRTISLRLCEQAGFRPRIVFESSNIQTAQSLVAAGMGLSFA 240 Query: 239 PVE-MMSPDLRVLSGVDGLPPLPDTEYLLCYD-PSSNNELAQVIYQAMESY 287 P ++P + P ++ Y + A+ Q + Sbjct: 241 PKMITLAPGTIEPPTYVRIKTKPSRTLVVAYRKDKPLSRPAEAFVQCLIEQ 291 >UniRef50_C1F961 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F961_ACIC5 Length = 288 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 67/287 (23%), Positives = 119/287 (41%), Gaps = 12/287 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++ LR A+A+ F+ AA Q ++SQQ+ +LE+ +G +LF R GR+ +TE Sbjct: 1 MEFHQLRYVCAIAETGNFSRAAERCQVAQPSLSQQVLKLEEDLGVKLFDRLGRSLRITEA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L +AR IL + A +S+ +++G + +G A ++P + YP+ Sbjct: 61 GRAFLPHARSILHQMEAARASVAGKSKDVRGSVAVGVIPTIAPYLMPRYTAAFARKYPEA 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHR--PSAFKALNLRTSPTHWYCAAEYI------ 180 L + + + E L + +DL V + + L T P ++ Sbjct: 121 RLRIVEETTPVLVESLRNLSIDLAVLALPLRHKDLECIPLLTEPMFAVLPKDHPRASAQT 180 Query: 181 --LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 L+ V+L D FRD+ LA + A + R+A+ + ++ V AG+GV+ Sbjct: 181 LSLKDLRGETFVMLRDGHCFRDLSLAACSHARVTPRIAFESGQFRSLFGMVAAGMGVSLV 240 Query: 239 PVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 P M T S N + Q + ++ Sbjct: 241 PQMAMDRSAGCAYVRLSDARAARTVVAATLRGRSFNHMQQAFLRGIQ 287 >UniRef50_A8G7X5 Transcriptional regulator, LysR family n=1 Tax=Serratia proteamaculans 568 RepID=A8G7X5_SERP5 Length = 284 Score = 243 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 94/277 (33%), Positives = 142/277 (51%), Gaps = 3/277 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + LL +FVAV D N+F AA V +QS VSQQ++RLE+++GK LF R LLTE Sbjct: 7 FNPQLLLSFVAVCDSNSFTRAAERVFLSQSTVSQQVRRLEEMLGKPLFERSSHQVLLTEE 66 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G++LL YAR+I+ N+EA +L GVL +G ++ A LL S +P L L Sbjct: 67 GVKLLSYARRIIALNEEAHDALTGIWRDGVLRLGMPEDFAAPT-TELLAEFSRAHPHLRL 125 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 DV +A + +E+DL++ R S R P W + + + P+PL Sbjct: 126 DVTSGLSADLHSAYAREELDLILVKQRRSQPP-RAARPEPLLWLDSLAFPAIEQSPVPLA 184 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 + +RD + L+ WR+ Y +++L A+ AA AGLGVT P P RVL Sbjct: 185 VFPLNGLYRDDLCQALDNLGKRWRIGYSSASLAALTAASAAGLGVTLLPAGCRLPSHRVL 244 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 +GLPP+ + E L Y + + + ++++ Sbjct: 245 GSAEGLPPIDNIELALYYRDGAP-AATPALAERLKAF 280 >UniRef50_Q2J7C4 Transcriptional regulator, LysR family n=22 Tax=Actinomycetales RepID=Q2J7C4_FRASC Length = 316 Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats. Identities = 70/299 (23%), Positives = 104/299 (34%), Gaps = 16/299 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + L L FVAVA+ F AA V Q ++SQQ++ LEQ +G LF R N LT Sbjct: 1 MQLHQLAYFVAVAETRHFTRAAQRVHVAQPSLSQQIRALEQELGTPLFNRARGNISLTPA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LL AR+IL + A + G + +GA+ LP +L YP + Sbjct: 61 GETLLPLARRILTDTETARQRVTELLDLRHGTVRLGATPSLCTGFLPDVLRLFHQRYPGI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHR----PSAFKALNLRTSPTHWYCAAEYIL--- 181 L V + + L + +DL + A L + + Sbjct: 121 RLLVEEGGSRDLVRDLAAGSLDLALIILPLQSSDPALATSPLIRESLVLVSSLDEPPIVA 180 Query: 182 ------QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGV 235 P+V+ R+ + +A A + AV V AGLG Sbjct: 181 GRPLTVADLRNHPMVMFRRGYDLREATVTACREAGFEPIFAIEGGEMDAVLGFVAAGLGS 240 Query: 236 TARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYS 294 P ++ L + LP L T L A + + + Y S Sbjct: 241 AVIP-STVAHRLGMRVTPFVLPGLQRTIGLARRRDVEPTRAAVELQRVLWEYLRDAAAS 298 >UniRef50_D0IY48 Transcriptional regulator, LysR family n=22 Tax=Proteobacteria RepID=D0IY48_COMTE Length = 333 Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats. Identities = 88/308 (28%), Positives = 150/308 (48%), Gaps = 16/308 (5%) Query: 12 DLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHG 71 DLD+LR+F L +FA AA + R+ SA+S Q+++LE G L + GR LTE G Sbjct: 7 DLDVLRSFSTGVALGSFARAADKLGRSTSAISAQLKKLEAQCGTPLLRKAGRGLELTEAG 66 Query: 72 IQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALD 131 LL YA ++L NDEA +++ S L+G++ +G ++ + +LP +L R + +P++ ++ Sbjct: 67 ETLLAYAHRLLELNDEAVAAVSGSQLRGLVRLGLQEDLGEALLPAVLGRFARAHPQVRIE 126 Query: 132 VRVKRNAYMAEMLESQEVDLMV---TTHRPSAFKALNLRTSPTHWYCAAEYILQK----- 183 V R+ + E ++DL + S A + P HW A + Sbjct: 127 ACVGRSDELRERFAQGQLDLAMLWDVGADLSGIHAETVMRLPLHWIGPAAPEVLDSLGCL 186 Query: 184 -------GEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 + + LV+L++P P R++V A L +A I WR A+ +++L + AA AGLG++ Sbjct: 187 QPDQEGKLKTLALVMLEEPCPLRELVTAVLERAGIAWRHAFSSASLGPIWAATSAGLGLS 246 Query: 237 ARPVEMMSPDLRVLSGVD-GLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSP 295 R + P +R + + GLP LP + +L S A+ + + P Sbjct: 247 VRTPFGLPPHVRSYAPEEIGLPHLPTMDLVLGRSHSLLEPSAERLATLLVEAVRAHTNFP 306 Query: 296 MSAPEGDD 303 + Sbjct: 307 ATEAVPSS 314 >UniRef50_Q1IRM1 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRM1_ACIBL Length = 302 Score = 242 bits (620), Expect = 8e-63, Method: Composition-based stats. Identities = 64/290 (22%), Positives = 121/290 (41%), Gaps = 16/290 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D D L TF+ VA L F+ A V R+QSAVS Q+++LEQ G+ LF R G+ L+ Sbjct: 1 MDFDQLLTFLEVAKLGNFSRAGEKVYRSQSAVSAQIRQLEQEYGERLFDRSGKIVRLSPA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSN--LQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LL YA++++ +E+ ++ +GVL+IGA++ + +LP + +P++ Sbjct: 61 GEVLLEYAQRMVALRNESLRAVADQGETPRGVLSIGANEATCLYVLPDIFTEYCQQFPQV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRP--SAFKALNLRTSPTHWYCAAEYILQKGEP 186 + V + + + +E +DL + T + K + + L E Sbjct: 121 QITVYRNFSRKILQAVEDGVIDLGIATLPVKSPSLKVHPIFRDRLELMVPVRHPLAAKES 180 Query: 187 IPLV-------LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARP 239 + + + R + + R+A ++ +++ V +G+GVT Sbjct: 181 VTIEEIAEYPQIFPKTGYTRQQLDKLFRPYNSKLRVAMEIPSVGLIKSFVVSGVGVTLLS 240 Query: 240 VEMMSPDLRVLSGVDGLP----PLPDTEYLLCYDPSSNNELAQVIYQAME 285 ++R LP + L+ + + A M Sbjct: 241 STFAQDEVRA-GKAKMLPIAGVDMWRELGLIYRNDRTLPRSATAFIDLMR 289 >UniRef50_B2IKY9 Transcriptional regulator, LysR family n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IKY9_BEII9 Length = 291 Score = 242 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 87/286 (30%), Positives = 133/286 (46%), Gaps = 1/286 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD DLLR +V+V + + AA R QSA+S QM+RLE L+GK L R GR + T Sbjct: 6 LDPDLLRAYVSVCRHGSLSRAAEQAGRAQSALSMQMRRLEDLLGKRLLRRTGRGVIPTTE 65 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LGYA +IL +E + L + + IG ++E A +LP L ++ +P L L Sbjct: 66 GELFLGYATRILSLGEEVVARLGEQSTSDPIRIGLAEEIAIIVLPEALGQLRRAWPDLHL 125 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 D+ V + +++ E+DL V T A A+ W + P+ ++ Sbjct: 126 DIVVDHSIAISDRWREGELDLAVATCLAFAGDAVRSWDVELLWIGGIDCEPDPAHPLDII 185 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD-LRV 249 + +P +R +L L + RL + ++ A+RA V++GLGV E + P+ +RV Sbjct: 186 VYAEPCIWRRRMLEALTEIGRDHRLTLTSQSISAIRAGVESGLGVALMTAECVRPEKMRV 245 Query: 250 LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSP 295 L G+PP +Y L N I S W P Sbjct: 246 LPTSAGVPPPLIVQYGLYAPDRPNVVTKAAIELLARSLQARWSNFP 291 >UniRef50_P25544 RuBisCO operon transcriptional regulator n=13 Tax=Proteobacteria RepID=RBCR_CHRVI Length = 302 Score = 242 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 70/299 (23%), Positives = 124/299 (41%), Gaps = 20/299 (6%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 +++ L LR F AVA N++ AA + +Q AVS Q+++LE +G LF R G+ +LT Sbjct: 1 MHVSLRQLRVFEAVARHNSYTRAAEELHLSQPAVSMQVRQLEDEIGLSLFERLGKQVVLT 60 Query: 69 EHGIQLLGYARKI---LRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVY 125 E G ++ Y+R I LR +E SL +G L I + + P L+ + Sbjct: 61 EAGREVFHYSRAIGQSLREMEEVLESLK-GVSRGSLRIAVASTV-NYFAPRLMAIFQQRH 118 Query: 126 PKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPS--AFKALNLRTSPTHWYCAAEYI--- 180 + L + V + +ML+S VDL++ P +A +P ++ Sbjct: 119 SGIGLRLDVTNRESLVQMLDSNSVDLVLMGVPPRNVEVEAEAFMDNPLVVIAPPDHPLAG 178 Query: 181 -----LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGV 235 L + V+ ++ S R + ++ R + AV+ AV++GLG+ Sbjct: 179 ERAISLARLAEETFVMREEGSGTRQAMERFFSERGQTIRHGMQMTRNEAVKQAVRSGLGL 238 Query: 236 TARPVEMMSPDLRVLSG----VDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNP 290 + + + +L V+G P YL+ + A + + S Sbjct: 239 SVVSLHTIELELETRRLVTLDVEGFPD-RRQWYLVYRRGKRLSPAAGAFREFVLSEAAR 296 >UniRef50_B5JQV8 LysR substrate binding domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQV8_9BACT Length = 300 Score = 242 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 121/293 (41%), Gaps = 15/293 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L LR F+AVA+ F AA +Q ++S Q+ +LE +G++LF R GR LT Sbjct: 1 MELHQLRYFLAVAEAGNFTRAAEKCFVSQPSLSAQIIKLEGELGQKLFNRLGRRAELTRA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSN--LQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L AR IL + A + + ++G++ +G + ++P ++ YP L Sbjct: 61 GTFLESRARTILMEVENAERQIKENEEDIRGIVKVGVTPSVTPYLIPPVIRMCRERYPNL 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVT--THRPSAFKALNLRTSPTHWYCAAEYILQKG-- 184 ++++ + + ++ +++ ++ T + A + + + L Sbjct: 121 EINIQENLRRRLIDEVQQGHLEVAISSYTGDAANIDAEPILQEDLVLAVSKTHRLATQKS 180 Query: 185 -------EPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA 237 + PLVLL + + D V +K +I ++ + S + +V+ V GLGV Sbjct: 181 KVSIEDFKDEPLVLLGESATLGDKVFDFFDKMNIEPKVVALCSQVRSVKEMVNLGLGVAI 240 Query: 238 RPVEMMSPDL--RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYH 288 P L ++ + + L + + A+V + Sbjct: 241 LPAMAKEEHLPFEIVYRSLVSERMKRLLFALTHSRRYLSPGARVFVDLIREVA 293 >UniRef50_C7QKA9 Transcriptional regulator, LysR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QKA9_CATAD Length = 299 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 67/298 (22%), Positives = 112/298 (37%), Gaps = 14/298 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++ L TF VA + +F AAA + QS+V+ Q++ LE + ELF R G LT+ Sbjct: 1 MEFQQLVTFQRVATVLSFTRAAADLNYAQSSVTNQIRNLEASLQTELFDRLGSKIQLTDA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFS-NLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LL +A ++L DEA + + G LTIG + LP LL YP + Sbjct: 61 GQRLLLHAERLLALADEARADVAGPAEPSGTLTIGTMESITSYRLPPLLELFHYRYPAVH 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRP---SAFKALNLRTSPTHWYCAAEYILQ---- 182 L +R A L D+ + ++ L A + L Sbjct: 121 LALRPSLCADTCRALRQGTFDVGFLMEPDTGHAGLDSVVLSKERLVLVAAPSFPLASAPT 180 Query: 183 ----KGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 +P++ + +RD+ L + T+ A++ V AGLGV+ Sbjct: 181 VTIEALRKVPVLATESGCSYRDLFEIELTAEQLTPASFLEFGTIEAIKRGVIAGLGVSLL 240 Query: 239 PVEMMSPDLR--VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYS 294 P ++ ++ L+ + PP L + Q+ + Sbjct: 241 PEITVADEIASGSLTVLPWTPPFEVVIQLAWRRGKRLSRELQLFIDQTIRLVREESPA 298 >UniRef50_B5WR38 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=B5WR38_9BURK Length = 309 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 65/303 (21%), Positives = 109/303 (35%), Gaps = 17/303 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L LR FV VA+ F AA + Q +S Q+QRLE+ +G LF R R LTE Sbjct: 1 MELRHLRYFVVVAEELHFTRAAERLGIGQPPLSLQIQRLERDIGATLFRRLSRGVELTEA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIG-ASDESADTILPFLLNRVSSVYPK 127 G+ LL AR IL D C+ + G + +G A ++P ++ + +P Sbjct: 61 GVLLLDNARHILALVDRTCTDVQRLSRGEIGHMRVGFAGATYFLPLVPAIIREYRTRHPD 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHR---PSAFKALNLRTSPTHWYCAAEYILQK- 183 + L + + L VD L + L + Sbjct: 121 VVLSPEQSNTPSLVDGLLEGRVDAAFIRPPIVSADELDVELLVKEDMVVVLPHSHPLARA 180 Query: 184 GEPIPL--------VLLDD--PSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGL 233 GEP+PL +L + D + + +A RL A + ++ V AG Sbjct: 181 GEPVPLSALAEETFLLFPRAIGAGLYDAITSACQRAGFLPRLGQEAPQIVSIAPLVGAGF 240 Query: 234 GVTARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQY 293 GV+ P + + P L + + + + ++ W+ Sbjct: 241 GVSIVPRSTTQIQTDEVVYLPIAGNAPKAPISLAWRRHNPSPVVRLFRAVAREMAREWRK 300 Query: 294 SPM 296 + Sbjct: 301 TQG 303 >UniRef50_Q2SMF3 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SMF3_HAHCH Length = 285 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 87/292 (29%), Positives = 137/292 (46%), Gaps = 9/292 (3%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + ++ +LL+TFV V D A+ + +TQS VS Q+ RLE+ +G LF GR K L Sbjct: 3 LPDISTELLQTFVTVVDSGGVLRASERLFKTQSTVSMQLSRLEERLGVALFKTVGRRKEL 62 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G +L YARKIL +EA ++ +G LTIG S D L L++ + YP Sbjct: 63 TPEGETMLIYARKILDLQNEALKAIQGVQFEGELTIGISRSLVDGDLTNELSKFAMQYPL 122 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + L+VR + ++ E +E D ++ + + L L + W + ++ G P+ Sbjct: 123 IKLNVRSASSMHLHNAFEQEEFDCIIRLTQDPSADELVLSKAKMVWVASDKFQFDPGIPL 182 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 + P FR + L A I W+ AY + L A+ +AV+ L V+AR + P Sbjct: 183 RMANFTTPCQFRSISEKALKAAGIVWQEAYTTNNLNALMSAVRGNLAVSARTQHALQPGT 242 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAP 299 RV+ +GLP LP E + ++ LA+ + P A Sbjct: 243 RVVGPEEGLPELP--EIFVVAQTRGSSRLAEFFISWL-------APRPPVAA 285 >UniRef50_UPI000178A79D transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A79D Length = 291 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 64/290 (22%), Positives = 127/290 (43%), Gaps = 15/290 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L+TF VA +F AA + QS+V+ Q+Q+LE+ G +LF R+GR LT+ Sbjct: 1 MELIYLQTFREVAVRKSFTKAADELGYAQSSVTTQIQKLEKEYGVKLFERYGRGLRLTKS 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +L YA ++L ++ L G+L+IG D A LP +L+R+ + LA+ Sbjct: 61 GEELFKYAVQMLDLFQQSKEKLTKQG-GGILSIGTIDSLAAYFLPSVLHRLRQEHEDLAI 119 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTH---RPSAFKALNLRTSPTHWYCAAEYILQK---- 183 ++ R + + E DL + ++ +++R P H ++ L + Sbjct: 120 RLQTDREDSIVSKVREGEYDLGLILENKPEDTSLNWISIREEPLHLIAHPDHPLHRLPVI 179 Query: 184 ----GEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARP 239 ++ +D +R M+ L + P R+ A++ + +G G++ P Sbjct: 180 ELEHLADYEWIMTEDTCNYRIMLEKVLRASGAPVRIGLELGNPEAIKRYIMSGTGISLLP 239 Query: 240 VEMMSPDLRVLSGVDGLPPLPDTEY---LLCYDPSSNNELAQVIYQAMES 286 + +++ PD ++ + + Q + + ++S Sbjct: 240 RMVAEEEIKRGELAILPFQHPDIRLDIQIVVHPKKWLSHSLQDMIEMLKS 289 >UniRef50_B9YZG6 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YZG6_9NEIS Length = 290 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 82/293 (27%), Positives = 134/293 (45%), Gaps = 7/293 (2%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + ++ + L+RTFV VAD AA+ + R S +S Q+ RLE LV L R L Sbjct: 1 MADIPIPLMRTFVVVADTLNLTTAASRLHRAPSTISMQLNRLEALVTAPLLERGQYGVRL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G QL +A ++L +D S +N+ G + +G D A L LL YP+ Sbjct: 61 TAAGEQLRTHAHQLLSLHDRILGSFQNANITGKVRLGTHDLYATRALTPLLEAYMLSYPE 120 Query: 128 LALDVRVKRNAY-MAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEP 186 L+V + +A ++ ++DL + + L L W A + + + P Sbjct: 121 AWLEVTCDHRPHYLASLVNEGQLDLALVEMPALSDGGLRLCRDQLIWVRAETHPVHQRTP 180 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 +PLVL + +R+ L +D P+R+A+ + + V AAVKAG+GV P + Sbjct: 181 LPLVLFPEGCYYRETATRALQLSDRPYRVAFTSHSRGGVLAAVKAGIGVGITPRTTVEEG 240 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES---YHNPWQYSPM 296 L ++ G LP LP T+ L + NE ++ Q ++ + + P Sbjct: 241 LVIIEGE--LPSLPQTDTTLFIADN-VNEATTLLAQTIKRSPLFQRDSRNGPA 290 >UniRef50_A0B0Y3 Transcriptional regulator, LysR family n=4 Tax=Burkholderia cenocepacia RepID=A0B0Y3_BURCH Length = 291 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 85/289 (29%), Positives = 131/289 (45%), Gaps = 1/289 (0%) Query: 5 NRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRN 64 R NLDL LLR FV+VAD + AA A+ TQ A+SQQ+ RLE L G LF R RN Sbjct: 2 RRMTRNLDLALLRAFVSVADHRSMTAAGHALHLTQGAISQQVARLEMLSG-PLFVREHRN 60 Query: 65 KLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSV 124 LLT G +LL AR++L +D + L ++G + +GA + T L +L + Sbjct: 61 LLLTAAGERLLEQARRLLAAHDALLAELTAGAVEGTVRVGAPQDLVGTCLAPILKSYTHA 120 Query: 125 YPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKG 184 +P++AL + + + L +D+ + + + + W A + Sbjct: 121 HPRVALTLVCAASPELRRGLTHGNLDVALIEAPVGSSRGECIAVDRLVWVGAKGGTAHRH 180 Query: 185 EPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMS 244 P+P+ ++ FR VL L D PWR + + A A V+A L VT + Sbjct: 181 SPLPVSMVAQTCAFRPTVLDALRGCDRPWRTVFENGSFDATAATVRADLAVTVWLASTVP 240 Query: 245 PDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQY 293 PDL +L GLP LP+ L + A + + + + + Sbjct: 241 PDLEILPAGGGLPALPNFSINLHVPRGQHTPAATELARYLRNGFARLRA 289 >UniRef50_D1VD43 Transcriptional regulator, LysR family n=1 Tax=Frankia sp. EuI1c RepID=D1VD43_9ACTO Length = 361 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 72/318 (22%), Positives = 107/318 (33%), Gaps = 20/318 (6%) Query: 13 LDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGI 72 L L FVAVA+ F AAA V Q ++S Q++ LE +G LF R N LT G Sbjct: 21 LQQLAYFVAVAETKHFTRAAARVHVAQPSLSAQIRALETELGSPLFNRARGNITLTAAGE 80 Query: 73 QLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 LL ARKIL D A + +G + +GA+ +LP +L YP + L Sbjct: 81 ALLPLARKILADADMARREVQELTDLRRGTVRVGATPSLCTGMLPEVLRLFRQRYPGIQL 140 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHR----PSAFKALNLRTSPTHWYCAAEYIL----- 181 V + + L +DL + A L + + Sbjct: 141 LVEEGGSRDLVGELAVGALDLALIILPLQGSDPALATAPLLREDLVVISSPDGPPPVRTA 200 Query: 182 ----QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA 237 + PLV+ RD + A A + AV V AGLG+ Sbjct: 201 QMAVEDLRDRPLVMFRRGYDLRDFTVGACRAAGFEPTFAIEGGEMDAVCGFVMAGLGIAV 260 Query: 238 RPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIY----QAMESYHNPWQY 293 P M++ + + P L T L A+ + + + Sbjct: 261 IP-SMVAFRQPLRTTPFAAPGLHRTIGLAHRRDVEPPRAARELRATLVDFVANAAAADML 319 Query: 294 SPMSAPEGDDSLLIERDI 311 P P + + Sbjct: 320 PPGVRPAPGVRRGADGHM 337 >UniRef50_Q46MA3 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46MA3_RALEJ Length = 296 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 64/292 (21%), Positives = 108/292 (36%), Gaps = 14/292 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +DL LR F+A+A+ F AA + Q +S Q+++LE+ + L R R+ LTE Sbjct: 5 MDLRHLRYFIAIAEELNFTRAAERLHIAQPPLSMQIRQLEEEMDVTLLNRTRRHVELTEA 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFS--NLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L AR+ILR + A + G LT+G + ++ T+LP +L +P + Sbjct: 65 GRIFLEQARQILRATERAVVQAQRAHRGETGRLTVGFFEHTSYTLLPPILRAYRERFPSV 124 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPS--AFKALNLRTSPTHWYCAAEYILQKGEP 186 + +R AE L + D+ P + P A + L E Sbjct: 125 EILLRWFPVVKQAEALRRGDADISFMRPVPDLEEVTWETILEEPFVLAVPARHPLANAES 184 Query: 187 I--------PLVLL--DDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 I P V+ + F M + A ++ + + V +G G+ Sbjct: 185 ISLKKCAQEPFVMYIPEMAPDFHAMNMRMCASAGFVPKVISEVGQVYTLLGLVSSGAGIG 244 Query: 237 ARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYH 288 P + + P E +L Y + L + +S Sbjct: 245 FVPASVRKVKFDHVVYKPIEGRQPTIEIMLGYSQRTPTPLMTAFIETAKSML 296 >UniRef50_A3XB80 Transcriptional regulatory protein, LysR family protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XB80_9RHOB Length = 305 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 89/286 (31%), Positives = 142/286 (49%), Gaps = 4/286 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 L+LD LR+FVA+ + +F AAA V ++ SAVS Q+ +LE+L+G L R R+ LT Sbjct: 19 RTLNLDALRSFVAICETGSFRRAAARVHKSPSAVSLQIGKLEELLGVRLLDRDARHVALT 78 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 + G LLG AR+IL NDE + S L G L + A + +++P LL R++ V+P + Sbjct: 79 DQGGTLLGQARRILGMNDETLALFRRSALVGRLCLSAPHDLGVSLVPGLLRRLAEVHPGV 138 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHR-PSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 +DVR+ + + + + +L + SA +A +L + P W + +P+ Sbjct: 139 HVDVRLGTSDAVQKGITDGSANLALFNDVGASAIQAHDLFSEPLKWLVLDGGQAVQQDPL 198 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL + D +RD L L +R+AY + T AA++A L V A P+ + DL Sbjct: 199 PLAVADVGCAWRDAALNALQTVGRAYRIAYSSDTSMGQVAALRADLAVAALPLSLADRDL 258 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQY 293 LP LP T + +ELA+ + + + P Sbjct: 259 IEAPSHYDLPQLPLTHIRVA---DDGSELARAFVELVAADMRPRPR 301 >UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=Actinomycetales RepID=C7PVI0_CATAD Length = 297 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 69/292 (23%), Positives = 105/292 (35%), Gaps = 16/292 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + LR F+AVA+ F AA A+ TQ ++SQQ++ LE +G +LF R N LT+ Sbjct: 1 MQFHQLRYFIAVAETRHFTRAAEALHVTQPSLSQQIRALEHELGADLFLRARGNITLTDA 60 Query: 71 GIQLLGYARKILRFNDEACSSLM--FSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LL AR+IL D A + +G + +GA+ +LP +L YP + Sbjct: 61 GEALLPMARRILADADAARREVQELAELRRGHVRLGATPSLCTGLLPDVLRTYHRRYPGI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTH----RPSAFKALNLRTSPTHWYCAAEYIL--- 181 L V+ + + L +DL + A L A Sbjct: 121 QLLVQESGSHDLVRDLARGALDLALVVLPLPSPSPALTTEELLREDLVVVSAPNLPPPGD 180 Query: 182 ------QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGV 235 E L++ RD+ +A A + AV +AGLGV Sbjct: 181 GRQVRIADLEHEQLIMFRHGYDLRDLTVAACRAQGFEPVFAIEGGEMDAVLGFARAGLGV 240 Query: 236 TARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYD-PSSNNELAQVIYQAMES 286 P + L PP L + + AQ + + Sbjct: 241 AIVPSMVAQNVDPSLRVTPIAPPALHRTIALAHRTDVALPRAAQEFRRTLLE 292 >UniRef50_Q7MCP0 Transcriptional regulator n=17 Tax=Vibrionales RepID=Q7MCP0_VIBVY Length = 304 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 73/289 (25%), Positives = 141/289 (48%), Gaps = 3/289 (1%) Query: 2 ISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARH 61 + +N+D++ LR+F+A + +F AA + RTQSA S QM++LE+ +G ELF + Sbjct: 13 LKIRWIRLNMDIEALRSFLAFVETGSFTRAAKQISRTQSAFSAQMRKLEEEIGAELFIKE 72 Query: 62 GRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRV 121 GR +L++ GI+L +AR+++ +D+ S L + L +G ++ + +LP L+ + Sbjct: 73 GRYLVLSDAGIRLTSHARQLVSQHDQTLSELKHFQDKRPLRLGCPEDYNEKVLPSLIALL 132 Query: 122 SSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYIL 181 P ++ V + + + L++ ++D + T P++ + L + W + + + Sbjct: 133 HQAQPTCSIQVFSEPSIELRRKLDAGDLDCAILTRAPNSEEGYWLTSDQGVWIASQTFCV 192 Query: 182 QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVE 241 + +PL L + + L K ++L +T A RA V+ GL + A Sbjct: 193 EAHSALPLALFQADCKYHAAAIDGLTKRGQAFQLLACCNTASAQRALVEQGLAIGAMGKL 252 Query: 242 MMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNP 290 M +R+L PPLP + +L S+ L+Q + +E + Sbjct: 253 SMGDKVRLLK---DFPPLPKVDIVLAVSAKSHPLLSQTWLKQLEQQFSD 298 >UniRef50_B2T513 Transcriptional regulator, LysR family n=65 Tax=Proteobacteria RepID=B2T513_BURPP Length = 305 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 75/301 (24%), Positives = 120/301 (39%), Gaps = 30/301 (9%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + D L TF AVA+ + AA A+ +Q AVS Q+++L+ G+ L+ R GR LT Sbjct: 1 MTPDQLITFAAVAEHRNISRAAVALHLSQPAVSGQLRQLQDEFGEPLYQRDGRGVRLTPA 60 Query: 71 GIQLLGYARKILRFNDEACS--SLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G QL YA ++ +A + + QG L IGAS A +LP+L+ YP + Sbjct: 61 GEQLASYATRLRDTWRQAHAYRDALRGLEQGTLRIGASTTPASYLLPYLIADFHRRYPDV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHR-----PSAFKALNLRTSPTHWYCAAEYILQK 183 L + L+S VD+ + P + R + L + Sbjct: 121 TLHTADGNTTEIVGALDS--VDIAMIEGPVGVDLPPDTAVHSWREDEIVAIMPRTHPLAE 178 Query: 184 GE--------------------PIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLP 223 PLVL + S R +V +A +P R+A + + Sbjct: 179 LALSAQSAEVGQGGQAGLAAFGEYPLVLREAGSGVRQIVERAFARAGVPMRVALEIAGVE 238 Query: 224 AVRAAVKAGLGVTARPVEMMSPDLRVLSGVDGLP-PLPDTEYLLCYDPSSNNELAQVIYQ 282 V+ AV+AG+G+ M + R L + P PL +L S+ + + + Sbjct: 239 GVKEAVRAGMGIGFVSAMSMRHEDRALCLLSLSPEPLTRRLSILVPHASAPSRVVEQFLA 298 Query: 283 A 283 Sbjct: 299 L 299 >UniRef50_Q21IY2 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=Q21IY2_SACD2 Length = 299 Score = 240 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 70/295 (23%), Positives = 124/295 (42%), Gaps = 15/295 (5%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 I ++D D L+ F+AVA+ ++F+ AA + TQ AVS+++ LEQ + LF R GR+ L Sbjct: 2 ITSMDTDGLKAFLAVAEHHSFSVAAQHLFITQPAVSKRIAALEQELNHILFDRLGRDVAL 61 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVY 125 TE G LL A+ IL EA ++ + G L + S LP +L ++ + Sbjct: 62 TEAGQALLPRAQAILNSMHEAQRTIREFSGEIVGTLRVATSHHIGLHHLPPILREFAANH 121 Query: 126 PKLALDVRVKRNAYMAEMLESQEVDLMVTTHRP---SAFKALNLRTSPTHWYCAAEYILQ 182 ++ L + E + + DL V T P +A L P + A + L Sbjct: 122 KQVNLQFDFLDSEQAHEKVLRGDCDLAVVTLAPTLEENLEASVLWPDPLCFIVGANHPLA 181 Query: 183 KGEPIPL--------VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLG 234 + I L +L D + +V + + L + L ++ V GLG Sbjct: 182 TSKNISLEELSRTPAILPDLNTYTGRLVKHFFDTQGLALNLNMATNYLETIKMMVTVGLG 241 Query: 235 VTARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 + P M+ L++L + L ++ + + A+ ++ + + Sbjct: 242 WSVLPKTMVDSSLKILPIKNI--QLERQLGVVIHKKRTLGNAARAFFEVLSANSQ 294 >UniRef50_A9B3V4 Transcriptional regulator, LysR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B3V4_HERA2 Length = 298 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 62/284 (21%), Positives = 116/284 (40%), Gaps = 10/284 (3%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L LR F AVA L AA Q ++S+ ++ LEQ +G LF R GR L++ Sbjct: 1 MELSQLRYFEAVARLGNVTKAAHEQHIAQPSLSKALRALEQELGVHLFDRVGRGVELSDA 60 Query: 71 GIQLLGYARKILRFNDEACSSL--MFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LL YAR++L A +L G +++G + ++P L + Y + Sbjct: 61 GKLLLPYARRVLAELQAARHALQSRADLTVGHVSLGVTPTVGTRLIPQALAAFNRRYRGI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 L++ + + E+L + VDL + + ++ L + P ++ + + I Sbjct: 121 QLELHEAGASELVELLNAGVVDLAIVSALVHGVESTTLMSEPLVVAVGLQHRFAQRQSIA 180 Query: 189 --------LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 +L R+ L +A R+ + V + V AGLGV P Sbjct: 181 ANELRDEGFILFPQGYELRNYTLQLCEQAGFAPRIVLDGGEMDTVVSLVAAGLGVAVVPQ 240 Query: 241 EMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 + + + + + L T L+ + + A +++ + Sbjct: 241 LAIDQRMGLHALMIDAGGLQRTLRLIRHSQRQPSPAAAALHRVL 284 >UniRef50_O32186 Uncharacterized HTH-type transcriptional regulator yusT n=3 Tax=Bacillales RepID=YUST_BACSU Length = 295 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 70/306 (22%), Positives = 117/306 (38%), Gaps = 20/306 (6%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++ LR F VA T AA + QS V+ ++Q+LE +G LF RH R L+ Sbjct: 1 MESGDLRVFQMVAREGTITKAALQLGYVQSNVTARIQQLEAELGTTLFLRHNRGMTLSAS 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFS-NLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G LL YA KI+ DEA +L S G L IG + +A LP LL +P + Sbjct: 61 GKLLLDYANKIIGLLDEASKALSSSAEPSGPLMIGCTQTTAAVRLPKLLASYYEEHPNVQ 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVT--THRPSAFKALNLRTSPTHWYCAAEYI-LQKGEP 186 L + ++ + + E+D ++ AA +++ Sbjct: 121 LSLTTGHTQFLLDKVLRYELDGAFIGCECHHPELESYPAFEEEPVVVSAASVPDVEEAIT 180 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 P+++ +R+ + L + + TL A+ V AGLG++ P ++ Sbjct: 181 KPILVYSTGCSYRETLEKWLRSVGVTQPVIMEFGTLEAIIGGVTAGLGISLLPRTVVQKH 240 Query: 247 LRVLSGVDGLPPLPDTEYLL-----CYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPEG 301 G L PLP+ + S + + ++P+ E Sbjct: 241 --EAEGSIRLYPLPEALSQMKTEFIVRKDSFISSALRTFMD---------SFTPVKTAES 289 Query: 302 DDSLLI 307 S L+ Sbjct: 290 QKSSLL 295 >UniRef50_A0NS29 Transcriptional regulator, LysR family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NS29_9RHOB Length = 278 Score = 240 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 125/278 (44%), Gaps = 1/278 (0%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + +LD+DLLR FV V++ +F A +QSAVS ++++LE +G L +R R+ L Sbjct: 1 MTDLDMDLLRAFVRVSETGSFTRAGQMTGASQSAVSVKIKKLEDRLGNTLLSRSPRSVRL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G + L AR ++ +D + + ++Q L G SD +A LP ++ +S P+ Sbjct: 61 TSFGARFLNDARSLIDLHDSVTARISGPSVQKRLRCGISDHAAGGNLPAIIAALSKALPE 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 L V V + + ++ ++ W + E+ + G + Sbjct: 121 HRLHVAVGYSDTLYTDFKAGLFSAVMVRSEDVEGTGRVAFEENLVWTASREFAWKAGAAL 180 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PLV L + R + TL A I + A+ + + A++AAV AGLG+ + Sbjct: 181 PLVALSETCALRRLAEGTLKDAGISYEDAFTGTGVGAIQAAVSAGLGIACLDRRNIPAGC 240 Query: 248 RVLSGVDGLPPLPDTEYLL-CYDPSSNNELAQVIYQAM 284 R + + LP LP T+ L C + + + + Sbjct: 241 REVGDLFQLPVLPKTKMTLFCREDDIASAILGAFRDHL 278 >UniRef50_A6F002 Transcriptional regulator, LysR family protein n=1 Tax=Marinobacter algicola DG893 RepID=A6F002_9ALTE Length = 299 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 64/293 (21%), Positives = 115/293 (39%), Gaps = 14/293 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L LLRTF +VA+ +F+ AA A+ +Q AVS+ ++ LE+ +G L R G LTE Sbjct: 1 MNLHLLRTFASVAEQRSFSRAAEAIHISQPAVSRAVRELEEQLGMALLERRGGQVRLTEA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G +L +AR I A + L +G LTIGAS LP ++ +P + Sbjct: 61 GAELYQHARAIFALEQSAMADLRGRQGLERGSLTIGASRTIGTYFLPPVIAEFLRQFPAI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLR--TSPTHWYCAAEYIL----- 181 + + + + L + E+D+ + + +++ L Sbjct: 121 DVRIISENTELIQRRLLAYELDIAFIEGSVEDSRVEEVFWHEDELVILAHSDHPLLNRKS 180 Query: 182 ---QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + VL + S R + LA L +A + A+ +V AGLG+ Sbjct: 181 LKASDLDAERWVLREQGSGTRSVTLALLKQAGVKVDRTIEVGGNGALVQSVAAGLGLAMV 240 Query: 239 PVEMMSPDLRV--LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 L V ++ ++ + + + AQ + + + Sbjct: 241 SSVAAREHLSVGKVNVLNFPDRFKRPLHRIRLRNKPESPAAQALVAVADRVAS 293 >UniRef50_B5WW96 Transcriptional regulator, LysR family n=2 Tax=Burkholderia RepID=B5WW96_9BURK Length = 334 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 67/297 (22%), Positives = 114/297 (38%), Gaps = 16/297 (5%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + L L L+ F+ + +FA AA + TQ AVS Q+ +LE+ VG LF R R L Sbjct: 16 VRTLTLRQLQIFIVASRYTSFARAAEELHLTQPAVSMQIHQLEEAVGLRLFERVARKLTL 75 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVY 125 TE G L +A +IL + ++M S G +T+G A P LL S +Y Sbjct: 76 TEAGEVLTHHASRILGEIKDTEDAMMSLKSADSGSITVGIVSS-ATYFAPKLLAMYSHLY 134 Query: 126 PKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFK--ALNLRTSPTHWYCAAEYILQK 183 P++ ++ V + +L+ +DL + P A L + P + L Sbjct: 135 PRVDVNFSVGNRDALLRLLQDNAIDLAIMGRPPPELDTTAEPLASHPQVVIAPLSHPLCG 194 Query: 184 GEPIPL--------VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGV 235 L +L + S R A + + ++ AV AG+GV Sbjct: 195 ARRFDLQELCNDIFLLREPGSGTRMAAEAMFRQHLFTPAKTVTLGSNETIKQAVMAGMGV 254 Query: 236 TARPVEMMSPDLRVLSGVDGLP---PLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 + + + +LR P+ T ++ + + + Q + + Sbjct: 255 SLISLHTLQLELRTGEIALLDVNGTPIERTWQIVHLRSKQLSPTSVMFRQFLLEHAA 311 >UniRef50_B5HHH0 YwqM n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HHH0_STRPR Length = 297 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 71/297 (23%), Positives = 114/297 (38%), Gaps = 14/297 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +++ LL TF VA +F AAA + QS+V+ Q++ LE +G ELF R G LTE Sbjct: 1 MEIRLLVTFEKVAAHLSFTQAAAELKYAQSSVTSQVRSLESSLGTELFDRLGSRIRLTEA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF-SNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +L+ YAR+I+ ++EA +++ G + IG + LP LL YP++ Sbjct: 61 GERLVPYARRIIELSEEARAAVAETDEPAGTINIGTMESLTSYRLPELLELFHHRYPRIK 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRP---SAFKALNLRTSPTHWYCAAEYILQ---- 182 L +R L D+ R + ++ L P A + L Sbjct: 121 LSLRPTLGDETRRALRQGVYDIGFLMERETEHTGLRSEVLAPEPLVLVAAPGHPLAGAGG 180 Query: 183 ----KGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 LV + P+RD+ L + T+ A + V AGLGV Sbjct: 181 LTTPDLADAQLVGTEPGCPYRDLFENELRERTGAPPPFMEFGTIEATKRGVAAGLGVALL 240 Query: 239 PVEMMSPDLR--VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQY 293 P + +L VL + PP + + ++ + Sbjct: 241 PRMTVRAELASGVLVALPWEPPFRLHTQVAWREGKRLPRHVRLFIDETVRLVREQES 297 >UniRef50_C7QF45 Transcriptional regulator, LysR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QF45_CATAD Length = 307 Score = 239 bits (612), Expect = 9e-62, Method: Composition-based stats. Identities = 64/307 (20%), Positives = 117/307 (38%), Gaps = 17/307 (5%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + L+L L F+ V + F+AAA + +Q +VS ++ LEQ + L R G Sbjct: 1 MTQLNLHRLSIFLTVVETGGFSAAAQKLYMSQPSVSNHVRNLEQSLQTTLIDRSGPRIRP 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVY 125 T G L YAR+I +EA +++ G L +G + +LP LL R + Sbjct: 61 TAEGEVLAEYARRIFLLTEEAVAAIREVSGVQSGRLEVGGTTTVGTYLLPRLLARFRERH 120 Query: 126 PKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFK--ALNLRTSPTHWYCAAEYIL-- 181 + D+ V N + + L E+ L + +P+A + + A + L Sbjct: 121 QNIECDIVVGNNGQILKRLLDGELGLAIVAGQPAAPQLKTETVLDERLLLVAAPGHPLTH 180 Query: 182 -------QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLG 234 + +L + S RD+ A L D+ ++ +V AGLG Sbjct: 181 PTPHITAPQLAGERFLLREPGSQTRDLQEAALINWDLDDMPKADMWGPETIKQSVAAGLG 240 Query: 235 VTARPVEMMSPDLR--VLSGVDGLPPLPDTEYLL-CYDPSSNNELAQVIYQAMESYHNPW 291 ++ + +++ L+ ++ PPL ++ + + W Sbjct: 241 ISLISEHAIDTEVKDGRLAVLEVDPPLRSRPVVIAYRRDRLLSPAERAFVALARGL-RTW 299 Query: 292 QYSPMSA 298 S +A Sbjct: 300 PDSEAAA 306 >UniRef50_A5VE27 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VE27_SPHWW Length = 288 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 84/275 (30%), Positives = 137/275 (49%), Gaps = 1/275 (0%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LD L++F AVA F A A++ QS VS+ +++LE G LF R + LT Sbjct: 2 LDPSWLKSFAAVARTLNFTLAGASLNLRQSTVSEHVRKLEAAAGTRLFVRDTHSVRLTVD 61 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LG+AR IL ND A ++L+G + +G +++ LP LL + ++ +P +AL Sbjct: 62 GEAMLGFARSILEANDRALRHFARTDLRGSVRLGVTEDVVLAGLPELLRQFTAEHPHVAL 121 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLV 190 ++ V + + E LE +DL R S + + P W A ++IL P+PL+ Sbjct: 122 ELVVGLSEDVREKLELGMLDLAFIKRRASDKQGERVWREPLVWIAAPDFILDAKAPVPLI 181 Query: 191 LLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL 250 +L P+ R L L W + + T + AAV AGLGV ++ P L + Sbjct: 182 VLAPPAITRTAALTALETIGGHWHIVCTSGTQSGIHAAVAAGLGVAPHARSLVPPGLDEV 241 Query: 251 SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 S + LPPL D E+++ + A+ + +A++ Sbjct: 242 SSPE-LPPLGDVEFVVLAGRQGHRGPARALAEAIK 275 >UniRef50_C6AY75 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=C6AY75_RHILS Length = 285 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 79/282 (28%), Positives = 145/282 (51%), Gaps = 1/282 (0%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 +++LD LLR F+ VA++ T AA + RTQ+AVS Q+++LE+LVG LF+R + L Sbjct: 1 MLDLDSYLLRAFLTVAEIGTVNGAAVKLNRTQAAVSMQIRKLEELVGVTLFSRSSKGLEL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T HG +L YAR+++ +DE L ++ + +G ++ A L +L+ + PK Sbjct: 61 TSHGQIMLAYAREMVALSDEVGKRLTGKMIEDRIRLGVVEDFAAGHLIDILSAFRAQNPK 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + +D+ V+ N +A + E +++DL+V + K + T W ++++ +P+ Sbjct: 121 VEIDIIVEPNRRLASLFEDRKLDLVVCDITCLSRKPTLIWTEYLMWTVRSDFVADTEKPL 180 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 P+++ ++ P+ +A L++ +I W+ A VASTL A+ AV+ G+G+ + Sbjct: 181 PIIMFEEECPWTLPTIAALSQRNIKWKTACVASTLVAMATAVRVGIGIAPMMLTTKPEGC 240 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 R L LP E L S + + + + Sbjct: 241 RTLDRSADLPGPVRIEIGLYAQSESAEGA-RYLVDFISRHTA 281 >UniRef50_Q1LN85 Transcriptional regulator, LysR family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LN85_RALME Length = 307 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 68/295 (23%), Positives = 123/295 (41%), Gaps = 18/295 (6%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 + + LR VA ++ AA A+ T AVS Q++ E+ VG LF R GR LT Sbjct: 1 MQITFRQLRVVSEVARYSSVIRAAEALHLTAPAVSLQIKEAERQVGLTLFDRAGRRMTLT 60 Query: 69 EHGIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYP 126 G L YAR++L +A + G LTIG +A LP LL + + +P Sbjct: 61 TTGEYFLVYARRLLATLKDAEDMMARFKRLESGRLTIGMVG-AASYFLPQLLAKFHAEHP 119 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAF--KALNLRTSPTHWYCAAEYILQKG 184 + + +R+ + M++ +VDL + P +A + P + ++ + Sbjct: 120 AVDVRLRLASREKLGVMMQGNDVDLCIMGRPPQDPPTRAEPFASHPHVLVVSPQHRFARA 179 Query: 185 EPI--------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 E + P ++ + S R+ + L+ I + A++ AV AG+GV+ Sbjct: 180 EAVPAVALANEPFIVREPDSGTREALQKYLDAHRIQPTFVMEMPSNEAIKQAVMAGMGVS 239 Query: 237 ARPVEMMSPD----LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 + ++ + L + V+GLP L ++ + A+ + + Sbjct: 240 LLSLHTIALEWSNGLIAVPHVEGLP-LERRWNVVNIAAKQLSPAAEAFRYFVLEH 293 >UniRef50_Q15PU3 Transcriptional regulator, LysR family n=4 Tax=Alteromonadales RepID=Q15PU3_PSEA6 Length = 283 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 74/280 (26%), Positives = 128/280 (45%), Gaps = 3/280 (1%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + L LD LRTFV V DL +A A + R+Q A+S Q++RLE + K LF++ G+ + Sbjct: 1 MKQLSLDNLRTFVTVIDLGGYAKAGEYLGRSQPAISLQIKRLESQLNKRLFSKAGQRHEV 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 G+ L A+ +L NDE ++++G L +G E A T+LP ++ S +YP Sbjct: 61 NHDGLNLYHQAKNMLAINDEIFRQFEPASIRGRLRLGIPSEFATTLLPSIVGEFSKLYPD 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSA-FKALNLRTSPTHWYCAAEYILQKGEP 186 ++L+V + + + Q+ DL++ + L W Sbjct: 121 VSLEVTSALSKSLLSENQRQDFDLIMALLPHNQTVDGELLLDDDLVWVGNRNQNF-TNNT 179 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 + LVL D +R V+ L + WR+ Y + L + AA+ GLG+TA + + Sbjct: 180 LSLVLAPDGCMYRSRVIQALKQQTTQWRITYTNADLAGITAAINQGLGITALARSSVPKE 239 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 L ++ + LP L L + + + + ++S Sbjct: 240 LNIIR-HEMLPDLGKIRIALFNQAQRYWQASDKLAEFIKS 278 >UniRef50_A4FE82 LysR-family transcriptional regulator n=5 Tax=Actinomycetales RepID=A4FE82_SACEN Length = 294 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 70/293 (23%), Positives = 120/293 (40%), Gaps = 14/293 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L FVAVA+ F AA + QS +S ++ LE+ +G LF R RN LT Sbjct: 1 MELRQLEYFVAVAEECHFTRAAKRLHVAQSGLSASIRSLERELGARLFHRTTRNVTLTAA 60 Query: 71 GIQLLGYARKILRFNDEACSSLM--FSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LL AR+ L D A ++ L+G L+IG LP +L + +P + Sbjct: 61 GHALLHEARRALCAVDSARDAVAAVRGLLRGELSIGTLQCLHVVDLPPVLAGFVTAHPGI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHR---PSAFKALNLRTSPTHWYCAAEYILQKGE 185 + +R + +AE + + +DL P +L T P CA ++ + + + Sbjct: 121 EVRLRQGGSGDLAEQVRAGRLDLAFAVRPARCPDGVLVHSLDTEPLVLACAGDHPMAERD 180 Query: 186 PI--------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTA 237 + P V RD+V L + + R+A + + ++ V GLG+ Sbjct: 181 RVDPRELGEQPFVDFHPDWGTRDVVDRVLAETGVERRVALEVTDVHSLLELVACGLGIAL 240 Query: 238 RPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNP 290 P + + +V P P E + ++ A ++ E+ Sbjct: 241 VPRSFSAKNGQVRFVPLASPA-PTWETVAITSDPTSTAAAALLRDVQEASRRA 292 >UniRef50_B1I114 Transcriptional regulator, LysR family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I114_DESAP Length = 296 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 67/293 (22%), Positives = 122/293 (41%), Gaps = 18/293 (6%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L TFV VA +F+ AA + TQ AVS+ + LE G +L R R LT+ Sbjct: 1 MNLSYLETFVMVAKHKSFSRAAKTLSLTQPAVSKHISLLEAHYGTKLVNRTSRRVELTDA 60 Query: 71 GIQLLGYARKILRFNDEACSSLM--FSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 GI L +A +I+ + A ++ ++G L+IGAS ILP +L+ YP + Sbjct: 61 GIVLYHFAGRIIATMERAKEEIVSFSEEVKGRLSIGASTIPGHYILPRILSDFKKEYPLV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFK--ALNLRTSPTHWYCAAEYIL----- 181 + + V + L+ + + + V + + + ++ L Sbjct: 121 NVSLEVSNTGKVINRLQEEAIQVGVIGAPVDSPEINCTEFSSDEVVLIMPRDHPLVFRKE 180 Query: 182 ---QKGEPIPLVLLDDPSPFRDMVLATLNKADIP---WRLAYVASTLPAVRAAVKAGLGV 235 +V+ ++ S R +V L ADIP ++A + AV AAV+AGLG+ Sbjct: 181 LVTDDLVGEKVVVRENDSGTRRIVEEKLAAADIPLDSLQIAGEFGSTEAVLAAVEAGLGI 240 Query: 236 TARPVEM---MSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 + ++ + R++ + Y++ S + ++ Sbjct: 241 SFVSRWAAEKVALEGRIVMRTLQDLRFSRSLYIIYLRDRSLSRPTHAFLSFIK 293 >UniRef50_Q67PU0 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67PU0_SYMTH Length = 299 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 72/298 (24%), Positives = 117/298 (39%), Gaps = 17/298 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + L L TF V + FA A A V +Q AV++Q+ LE +G L R GR LT Sbjct: 1 MLLQHLITFCRVVETGGFARAGALVGLSQPAVTRQVAALEAELGTPLLDRSGRQIHLTPA 60 Query: 71 GIQLLGYARKILRFNDEACSSLM--FSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G + AR+I+ + + +G + IGA +LP +L +P + Sbjct: 61 GRLVYERARRIITAVNTLKEEVADLAHPERGRIAIGAVTTVGLRLLPPILAAFKREHPGI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRP--SAFKALNLRTSPTHWYCAAE-------- 178 + V+ R + L E++L + +++ L P CA Sbjct: 121 RVHVKADRTQETIQRLLEGEIELAILPTPVTHPRLRSVPLVEDPVVLVCAPGRRSELPDP 180 Query: 179 YILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 L K I L+ PS FR V A L +A + + + AV V+AG G Sbjct: 181 LPLAKLGEIDLISFQAPSRFRTFVDAMLEQAGVYPNVTMEFDSHEAVTLMVEAGFGCALV 240 Query: 239 PVEMMSPDLR----VLSGVDGLPPLPDTEYLLCYDPSSN-NELAQVIYQAMESYHNPW 291 P + +L V V+G+P + T L P+ + + ++Q + + Sbjct: 241 PASAVERELALGTVVRVEVEGMPRMARTTSLAFRHPNPGWSPATERLFQMIVDFFRQG 298 >UniRef50_B6R8G5 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R8G5_9RHOB Length = 292 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 76/287 (26%), Positives = 129/287 (44%), Gaps = 3/287 (1%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 LDLD LRT V +AD +F AA + +TQSA+S QM+R+E + + +F R GR+ LTE Sbjct: 5 LDLDSLRTLVMIADTGSFTRAAEELDKTQSAISMQMRRMEDKLERTIFRREGRHSKLTED 64 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LL +AR++LR NDE + + G + +G ++ +T ++ S PK Sbjct: 65 GELLLRHARQMLRLNDETLAMFSEREVTGKVRLGLAEGIDETRTAKIIFEFSKNNPKAEA 124 Query: 131 DVRVKRNAYMAEMLESQEVDLMVT---THRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 + A + + LE+ E+DL + + L + W + + L + + Sbjct: 125 SIVCAPAADLRKALEAGELDLAIIGSLADEAENAEGSVLSSERLVWAAGSNFKLASEKEL 184 Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247 PL + + R + L D +R+ Y +S V +G+ +T +P + Sbjct: 185 PLAVGLEQCRIRKAAVEALEDDDRAFRIQYSSSNPGLVEMTAASGMAITIQPRSSLVSSD 244 Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYS 294 L ++GLP LP+ L S+ + A + + S Sbjct: 245 AGLLELEGLPKLPNYVVKLVRGKESHFKAANALSDHLAKSFEKTAAS 291 >UniRef50_Q8Y2W8 Probable transcription regulator protein n=1 Tax=Ralstonia solanacearum RepID=Q8Y2W8_RALSO Length = 288 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 66/287 (22%), Positives = 120/287 (41%), Gaps = 8/287 (2%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + LDL+ L F +VADL + AA + R QS V+ +++ LE+ +G +LF RHG L Sbjct: 1 MRKLDLESLLFFKSVADLGSITQAARQLNRVQSNVTTRVKNLEERLGVKLFLRHGNRLTL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 + G +L GYA ++LR + EA S+++ QG L +G + +A LP +L++ YP Sbjct: 61 SADGERLRGYAERLLRLSAEAESAMLVRAPQGTLKLGTLESTAAARLPPVLSQFHRRYPD 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHR--PSAFKALNLRTSPTHWYCA--AEYIL-- 181 + +++ +A + +M++ EVD + + A ++L Sbjct: 121 VLIELVTGSSAKLLDMVQRYEVDAALISEPFHAPGLATQEAFDEVLVLIAPLTATHVLSH 180 Query: 182 QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVE 241 + ++ +R + L I ++ A+ A V AG G+ P Sbjct: 181 DHLQRCTVIAFSAGCSYRRIFEEWLASNGIAPARILELASYHAIVACVAAGTGIGIMPRS 240 Query: 242 MMSPDLRVLSGVDGLPPLPDTEY--LLCYDPSSNNELAQVIYQAMES 286 ++ P E L + P + + Q + Sbjct: 241 VLKAVHAEPQLQLLPLPPRYAEVKTHLVWQPDHDFAAVDALRQHLLE 287 >UniRef50_C6HY10 Transcriptional regulator, LysR family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HY10_9BACT Length = 303 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 68/306 (22%), Positives = 117/306 (38%), Gaps = 26/306 (8%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + D L+ F+ VA+ +F A + TQ AVS Q++ LE+ + LF R G+ LLTE Sbjct: 1 MTNDQLKVFLKVAEYQSFTQAGEVLFLTQPAVSLQVKSLEKDLKVSLFERTGKKILLTEA 60 Query: 71 GIQLLGYARKILRFNDEACSSLM--FSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G +LL AR I++ +EA + QG L IGAS +LP LL + ++ Sbjct: 61 GRKLLPLARSIIQQMEEAREVVRPLEDMPQGHLRIGASMTIGTYLLPPLLAQFLRANSRI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRT-----SPTHWYCAAEYI--- 180 + V + L++ E+DL + P+ + ++L + + Sbjct: 121 TASLAVANTHQILHDLKASEIDLGLIEGEPTRTQGISLDRKFLDHDRLVLIDSLNHPLLP 180 Query: 181 ------LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPW---RLAYVASTLPAVRAAVKA 231 L +P + + S R ++ L + ++P A++ V Sbjct: 181 SSGPVSLDALRKVPFIGREPGSGTRQVIERELLEKNLPPDSFETVMTVDNPEAIKELVAL 240 Query: 232 GLGVTARPVEMMSPD----LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESY 287 G GV + P LR ++ D P + + A + Q + Sbjct: 241 GSGVAFISSLCLRPHESGLLRTVAVEDFSPV---RNLWIFVPQKKTSPPADLFLQLLVKE 297 Query: 288 HNPWQY 293 P Sbjct: 298 RLPKDP 303 >UniRef50_C4ZKW2 Transcriptional regulator, LysR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZKW2_THASP Length = 304 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 61/293 (20%), Positives = 119/293 (40%), Gaps = 9/293 (3%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + + L+ L F VA AAA + R S V+ ++++ E +G +LF R GRN +L Sbjct: 1 MRRISLEDLHIFRCVAVEGGVLRAAARLNRVPSNVTTRIKQFESRLGTQLFRRQGRNVVL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T+ G +LLG+A ++LR DEA L + G L +G+ + +A LP +L+R + +P+ Sbjct: 61 TDAGHRLLGHAERLLRLADEAEEDLCSGVVAGSLRLGSLESAASVRLPPILSRYHAAHPR 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHR--PSAFKALNLRTSPTHWYCAAEYI----L 181 ++++ A + L++ ++D + + A+ + A Sbjct: 121 THVELQTGTTAALLRRLDNHQIDAAFVSEPFDKGSLSAVAVFAEELVLITARGGPRIGGA 180 Query: 182 QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVE 241 Q +V +R +++ A + R + A+ A V AG GV P Sbjct: 181 QDLADQTVVAFPHGCSYRRLLVDWFAAAGVTPRRFLDLGSYHAIVACVAAGTGVAIMPAS 240 Query: 242 MMSPDLRV--LSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQ 292 ++ + + + + L + L + + + Sbjct: 241 VLDNAVMGDSIQRHELPEAMRTNRTNLVWAGEPGGPL-SALLELLRVGAQAGA 292 >UniRef50_Q2RHG4 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RHG4_MOOTA Length = 302 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 68/298 (22%), Positives = 116/298 (38%), Gaps = 18/298 (6%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++++ L TF+ + T +AAA + TQ AVS+Q+Q LE G L R GR LT Sbjct: 1 MNINHLITFITTVEKGTLSAAAEELHLTQPAVSKQLQALEDYFGLRLLERRGREVRLTAA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G +AR I ++ L ++G L +GAS ILP L+ YP++ Sbjct: 61 GEICYRHARIIASHLNQTRRELAELTQLVRGRLLLGASTTPGQYILPRLIGAFRREYPRV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALN---LRTSPTHWYCAAEYILQ--- 182 + + + + + L+ E+DL V K L+ L + L Sbjct: 121 EVILTIADTQEVVQRLQEGEIDLGVVGAAGGRGKNLSYSRLAGDELVLIVPPGHRLAGAT 180 Query: 183 -----KGEPIPLVLLDDPSPFRDMVLATLNKADI---PWRLAYVASTLPAVRAAVKAGLG 234 + + PLV + S R +V L A P ++ + A+ +AV+AGLG Sbjct: 181 AISPGELKEEPLVWRESGSGTRRVVEERLAAAGFTVDPEQIVMELGSTEAIVSAVEAGLG 240 Query: 235 VTARPVEMMSPDLR--VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNP 290 ++ + ++ L+ V + L + A+ + Sbjct: 241 ISLVTSWAVEKSVKLGRLAVVTLQGVDLKRDLYLVRRRQPLSPAAEAFVNFAADHQPR 298 >UniRef50_D0J686 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J686_COMTE Length = 292 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 62/293 (21%), Positives = 116/293 (39%), Gaps = 12/293 (4%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + +DL+ L F +V D + AA + R QS V+ +++ LE+ +G +LF RHG L Sbjct: 1 MRKIDLESLAFFKSVVDTGSVTQAARQMNRVQSNVTTRIRNLEERLGVQLFLRHGNRLKL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 + G L GYA +ILR + EA S+++ QG L +G + +A LP L+R YP Sbjct: 61 STEGEVLRGYAERILRLSSEAESAMLLRAPQGTLRLGTLESTAAARLPPFLSRFHERYPD 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHR--PSAFKALNLRTSPTHWYCAAE----YIL 181 + +++ + + +M++ EVD + + A Sbjct: 121 VLIELVTGSTSRLLDMVQRYEVDAALISEPFTAPGLATQKAFDEELVLIAARSATGVLDS 180 Query: 182 QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVE 241 ++ ++ +R ++ ++ A+ A + AG GV P Sbjct: 181 EQLSRCTVIAFPAGCSYRRILEEWFASIGTAPHRVLEMASYHAIVACIAAGTGVGIMPRS 240 Query: 242 MMSPDLRVLSGVDGLPPLPD----TEYLLCYDPSSNNELAQVIYQAMESYHNP 290 ++ + PLP L + P + + + Q + + Sbjct: 241 ILRAVHAE--PQLQVLPLPRHYAEVTTHLVWLPQQESASTEALRQMLAAERPK 291 >UniRef50_A3ZYQ6 Transcriptional regulator, LysR family protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZYQ6_9PLAN Length = 293 Score = 236 bits (604), Expect = 6e-61, Method: Composition-based stats. Identities = 67/289 (23%), Positives = 119/289 (41%), Gaps = 15/289 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L F VA+ + + A + +Q A S+Q++ E +G++LF R GR LT Sbjct: 1 MNLHHLAIFHEVAETGSVSLGAEQLMISQPAASKQLRDFETALGEKLFDRTGRGLRLTTV 60 Query: 71 GIQLLGYARKILRFNDEACS--SLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L YARKI EA +L+ +G L +GAS A +LP +L R +P++ Sbjct: 61 GKLLNEYARKIFTLEAEAERVVALVRDVRRGELFLGASTTIAGYLLPQVLARFHQQHPEI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTH--RPSAFKALNLRTSPTHWYCAAEYILQKGEP 186 + V V ++ + VDL +T A + AA + L K Sbjct: 121 RVHVSVGNTDFVHRQVLDYRVDLGLTEGFVNEPGLTATSFAEDELVVVAAATHPLVKKRR 180 Query: 187 I--------PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 + VL + S R + ++ + R S+ A++ V AG+G+ Sbjct: 181 VKADDLSGQSFVLRESGSGTRAVQEQAISMCGVEVREVMTLSSTEAIKHVVAAGVGLAIV 240 Query: 239 PVEMMSPDL---RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 + +L + + +P +L+ + A+ ++A+ Sbjct: 241 SRLSVGAELVSGELCAIRLADLQIPRPLHLVQAQDRFASPAARAFHEAL 289 >UniRef50_Q3A8F8 Transcriptional regulator, LysR family n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A8F8_PELCD Length = 292 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 108/290 (37%), Gaps = 7/290 (2%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + ++D + L+ F+AVA+ + + AA + QS V+ ++++LE +G ELF R + L Sbjct: 1 MDDMDSNALKIFLAVAEEGSVSRAAERLHCVQSNVTTRIRKLEADLGAELFHRTRKGMGL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLM-FSNLQGVLTIGASDESADTILPFLLNRVSSVYP 126 + G LL YAR + EA ++L S G L +GA D +A LP LL YP Sbjct: 61 SAAGHLLLPYARSVTHLLHEARAALDPSSAPCGPLRLGAMDTAAVVHLPALLAGYHREYP 120 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFK--ALNLRTSPTHWYCAAEYILQKG 184 + L + + M + + ++ R A + ++ + Sbjct: 121 DVDLQLSTGASGEMVQRVLDYSLEGAFVGGRVEHPDIVAEEVLCEELVMVTSSTEPVVDE 180 Query: 185 EPI-PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMM 243 E + +++ R + L L A+ V AG+G+T P + Sbjct: 181 ESVLSVLVYRRGCSCRRKLEEWLKHTRRTPSRVVEMGALDAILGCVGAGMGITMLPRSFV 240 Query: 244 SPDL--RVLSGVDGLPPLPDTEY-LLCYDPSSNNELAQVIYQAMESYHNP 290 + + ++ PP L+ + Sbjct: 241 TREPFRSLVHIHAVAPPFDRLPIQLIRRRDVQPSSAMHSFLGMARETLAA 290 >UniRef50_UPI000178953B transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178953B Length = 284 Score = 236 bits (603), Expect = 9e-61, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 110/280 (39%), Gaps = 9/280 (3%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++ LR F AVA+ + AA + S V+ ++++LE + LF R R LT Sbjct: 1 MESGDLRIFRAVAEEGSITRAAQRLQYVPSNVTGRIRQLEDSLQTPLFIRSNRGMELTGA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF-SNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +L GY R+IL DEA S+ +G L IGA + +A LP L + +P+++ Sbjct: 61 GERLFGYTRQILNLLDEAEKSVQAEDTPRGPLRIGAIESTAAAYLPGRLADYYARHPEVS 120 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHR--PSAFKALNLRTSPTHWYCAAEYILQKGEPI 187 L + ++ + + + +E+D K + A + E + Sbjct: 121 LSLTTGNSSVLMQQVLDRELDGAFVYGPLTHPMLKQIPSYNEELVLISEAG-AASQQEQL 179 Query: 188 --PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVE-MMS 244 P+++L R V L +A + +L AV V +GLGV P +S Sbjct: 180 QKPMLILSTGCTHRSRVERLLAEAGVQHPQIIEFGSLEAVLGGVASGLGVALLPRSNAVS 239 Query: 245 PDLRVLSGVDGLPPLPD--TEYLLCYDPSSNNELAQVIYQ 282 LP Y + + + + + Sbjct: 240 LSNEKNIAAMTLPESYRDVVVYFIYHRDVPLSSALRAFLE 279 >UniRef50_C7I3E5 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I3E5_THIIN Length = 301 Score = 236 bits (603), Expect = 9e-61, Method: Composition-based stats. Identities = 59/300 (19%), Positives = 100/300 (33%), Gaps = 16/300 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L LR FV +A+ +F+ AA + +Q +S Q++ LE +G L R R LT Sbjct: 1 MELRQLRYFVTIAEQGSFSRAAERLHISQPPLSTQIKALEDEIGARLLERSNRGVTLTAA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNL--QGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G R +L + A + + G L+IG + ILP L + YP++ Sbjct: 61 GAAFFEDIRSVLAQLEHAVERVRQAERGDAGTLSIGFVSIADFGILPPTLKSFRARYPQV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPS--AFKALNLRTSPTHWYCAAEYI------ 180 + + L + E+DL + L P + Sbjct: 121 DVQLHELTTDAQIRELRAAELDLSIGLAPVDEPGLTFTPLLQEPLMLAAPTTHPVLQEGS 180 Query: 181 ----LQKGEPIPLVLLDD--PSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLG 234 L+ P ++ D+ L+ A R+ A + V V G+G Sbjct: 181 GAVDLRALAKEPFIVPPRNIGPGLYDLTLSLCQAAGFAPRITQHARQMQTVIGLVSCGMG 240 Query: 235 VTARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYS 294 V P + + L E + ++N L QA+ Sbjct: 241 VALVPASLRQLKRPGVQYRPLLGQPATIELGILQLSQTSNPLRDNFNQALREAALHLLTR 300 >UniRef50_B9ZSB8 Transcriptional regulator, LysR family n=4 Tax=Bacteria RepID=B9ZSB8_9GAMM Length = 340 Score = 235 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 65/303 (21%), Positives = 114/303 (37%), Gaps = 20/303 (6%) Query: 1 MISANRP---IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKEL 57 M+ + P I + L L+ F A+ L +F AA + TQ VS Q+++L +G L Sbjct: 16 MLKSELPAHLIRHATLRQLQVFEAIVRLGSFTRAAEELHLTQPTVSIQIKKLSTALGLPL 75 Query: 58 FARHGRNKLLTEHGIQLLGYARKILRF--NDEACSSLMFSNLQGVLTIGASDESADTILP 115 F GR TE G+ L R++L N E + M +G L + A P Sbjct: 76 FEYVGRKAFPTEVGLLLYDTCREMLGALTNLEMKLAEMHGLKRGRLRLAVITT-AQYFAP 134 Query: 116 FLLNRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAF---KALNLRTSPTH 172 +L + + YP + L + V + E L + + DL + H P +P Sbjct: 135 SILGQFARRYPDIELSLEVSNFDRVLERLSNNDDDLYIIGHVPERLTDVAVHPFAPNPLV 194 Query: 173 WYCAAEYILQKGEPIPL--------VLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPA 224 + ++ L IPL ++ + S R+ L + I + + A Sbjct: 195 VMASRDHPLVGRRNIPLKELEQETFLMREPGSGIREATLKLFQEHGISPPVRMELGSNEA 254 Query: 225 VRAAVKAGLGVTARPVEMMSPDLRVLSGVDGLP---PLPDTEYLLCYDPSSNNELAQVIY 281 ++ AV GLG+ + +S + P+ +++ + +AQ Sbjct: 255 IKQAVIGGLGIAVLSLHTLSAEGAEGPVALLDVEHFPIHRQWHIVYPKKKVLSVVAQTFL 314 Query: 282 QAM 284 Sbjct: 315 DFA 317 >UniRef50_A3EQ05 Putative transcriptional regulator, LysR family n=2 Tax=Leptospirillum sp. Group II RepID=A3EQ05_9BACT Length = 303 Score = 235 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 68/296 (22%), Positives = 123/296 (41%), Gaps = 25/296 (8%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + D LR F+ VA+L +F A + TQ A+S Q++ LEQ +G LF R GR LLTE Sbjct: 1 MTHDQLRIFLKVAELGSFTQAGETLFLTQPAISLQVKTLEQHLGVPLFERKGRQVLLTEA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G++LL +AR+I+ +A + + S G L IG+S ILP +L S P++ Sbjct: 61 GVRLLPHARRIMEEIADARARVAELSSGALGNLRIGSSTTIGTAILPSILYEFSQKNPQI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKAL-----NLRTSPTHWYCAAEYI--- 180 + + + + L++ E+D+ + +A L + E Sbjct: 121 RTSLSILNSHRIVFDLKTSEIDIGFIEGDLTRTEAQGVRRSFLAQDRLVLVDSREKPFVS 180 Query: 181 -----LQKGEPIPLVLLDDPSPFRDMVLATLNKADIP---WRLAYVASTLPAVRAAVKAG 232 L++ +PL+L + S R ++ +L P + ++ ++ V G Sbjct: 181 GDETSLEEIRRLPLILREAGSGTRQILEDSLLDRGFPIDLFTVSLTVGQTGVIKKMVGKG 240 Query: 233 LGVTARPVEMMSPD----LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 G+ V + + LR + D P + + + ++ + Sbjct: 241 AGIAFMSVLAIEKEDQDLLRTVRVRDFSP---IRDLWIVTPGRRVSSATRLFLDCV 293 >UniRef50_P0ACQ6 Hydrogen peroxide-inducible genes activator n=273 Tax=cellular organisms RepID=OXYR_ECO57 Length = 305 Score = 235 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 71/292 (24%), Positives = 124/292 (42%), Gaps = 17/292 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +++ L VA+A+ F AA + +Q +S Q+++LE +G L R R L T+ Sbjct: 1 MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQA 60 Query: 71 GIQLLGYARKILRFNDEA--CSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G+ L+ AR +LR +S + G L IG +LP ++ + +PKL Sbjct: 61 GMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKL 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTH--RPSAFKALNLRTSPTHWYCAAEYILQKGEP 186 + + + + L+S ++D ++ AF + L P ++ E Sbjct: 121 EMYLHEAQTHQLLAQLDSGKLDCVILALVKESEAFIEVPLFDEPMLLAIYEDHPWANREC 180 Query: 187 IP--------LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTAR 238 +P L++L+D RD + +A + A++L +R V AG G+T Sbjct: 181 VPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGITLL 240 Query: 239 PVEMMSPDLRVLSGVDGLP---PLPDTEYLLCYDPSSNNELA-QVIYQAMES 286 P + P+ R GV LP P P L Y P S + + +A+ + Sbjct: 241 PALAVPPE-RKRDGVVYLPCIKPEPRRTIGLVYRPGSPLRSRYEQLAEAIRA 291 >UniRef50_A0LNI4 Transcriptional regulator, LysR family n=4 Tax=Deltaproteobacteria RepID=A0LNI4_SYNFM Length = 302 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 69/294 (23%), Positives = 118/294 (40%), Gaps = 20/294 (6%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D+ L F V ++ +F AA AVC TQ VS+ ++ LE+ +G++L R GR L T Sbjct: 1 MDIHRLVVFCRVLEMGSFTKAAEAVCLTQPTVSEHVRALEETLGEKLIDRLGREVLPTPA 60 Query: 71 GIQLLGYARKILRFNDEACSSLM--FSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L YAR I++ DEA +L NL G L IGAS +LP L+ YP + Sbjct: 61 GKILYQYARDIIQLRDEAVQALEKFKGNLSGALLIGASTIPGTYVLPELIGSFKKSYPAI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKA--LNLRTSPTHWYCAAEYI------ 180 + +R+ +A + V+ V R + + ++ Sbjct: 121 QITLRITDSAEVVARTIDGGVEFGVIGARLEDRRIVLEEAFSDELVLAVFRDHPWAVRKS 180 Query: 181 --LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPW---RLAYVASTLPAVRAAVKAGLGV 235 L++ P +L + S R ++ L + + A+R +KAG+G+ Sbjct: 181 VSLEELAGEPFILRERGSGTRIVMNQALEAHGFSPTKLNIVAEMGSTEAIRQGIKAGIGI 240 Query: 236 TARPVEMMSPDLRVLSGVDGLP----PLPDTEYLLCYDPSSNNELAQVIYQAME 285 + ++ DLR + +P +L+ + L + Sbjct: 241 SILSHRAVAEDLR-HGSLFAVPLAGIRFSRPFFLVQRKNRQMSPLCSAFLNHLR 293 >UniRef50_C1DAF5 LysR-family transcriptional regulator n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DAF5_LARHH Length = 290 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 105/280 (37%), Gaps = 6/280 (2%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +DL LR F VA+ + AAA +C QS VS ++++LE +G ELF R R +T Sbjct: 1 MDLASLRLFRIVAETGSVTAAAGQLCCVQSNVSARLRQLEDDLGIELFRRDRRRLFITPA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G LLGYAR++ DEA +++ G L +G+ + +A LP +L +P + L Sbjct: 61 GEILLGYARRLQSLADEARAAVRGDEPGGTLRLGSMETTAAIRLPQVLPAFHRRHPAVQL 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRP--SAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 + + +D + + A L + P Sbjct: 121 VLDTLPTRQAVSAVLEYRLDAAFVCGPVTEPGLEGCPVWCEAPCLIAEAGLSLAEATVAP 180 Query: 189 -LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSP-- 245 L+ +RD + I + A+ V AG+G+ P ++ Sbjct: 181 VLLTFGAGCAYRDRLEDWCRVRGIVPATVLEFRSFQAILGCVAAGMGIALLPRSVLDDPA 240 Query: 246 -DLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAM 284 L+ D + L + + + + ++ Sbjct: 241 SAHLGLAVHDLPAEAAPMQTWLVWRRGWQSPALRALCASL 280 >UniRef50_A2SKW7 Transcriptional regulator, LysR family n=24 Tax=Burkholderiales RepID=A2SKW7_METPP Length = 342 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 73/303 (24%), Positives = 119/303 (39%), Gaps = 18/303 (5%) Query: 5 NRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRN 64 + P+ N L F AVA L + + AA + TQ AVS Q+ LE G L R R Sbjct: 2 SNPLRNATFRQLAAFNAVARLGSVSRAADEMHLTQPAVSIQLGILEDAAGTPLLRRSARG 61 Query: 65 KLLTEHGIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVS 122 LTE G L GYA +IL EA ++ ++ G+L IGA A+ +LP LL Sbjct: 62 VKLTEAGELLAGYASRILDLWGEAGDAMAAHCGDIAGLLRIGAVTT-AEYLLPPLLLEFV 120 Query: 123 SVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKAL--NLRTSPTHWYCAAEYI 180 +P++ + +++ A + L Q++DL + P+ K + P + A + Sbjct: 121 REHPQVKVKLQIGNRADVVNQLAGQDIDLAIMGRPPAELKTISAAFAKHPMAFVAAPSHP 180 Query: 181 --------LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAG 232 L L++ + S R V A + + S+ A++ AG Sbjct: 181 LMTTPKPGLAALNQANLLVRERGSGTRTTVEQLFKDAGVSLTIGSEMSSNEAIKQMCAAG 240 Query: 233 LGVTARPVEMMSPDLRVLSGVDGLP----PLPDTEYLLCYDPSSNNELAQVIYQAMESYH 288 GV + +L + LP P+ +++ A Q + + Sbjct: 241 FGVAFLSLHSCVLELET-GMLAILPMPDCPIERDWHVMHLAGRPVPAAAAAFEQFLRVHG 299 Query: 289 NPW 291 W Sbjct: 300 QAW 302 >UniRef50_C7I2X4 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I2X4_THIIN Length = 313 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 72/312 (23%), Positives = 116/312 (37%), Gaps = 17/312 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +DL LR FVAVA+ F AA + +Q +SQQ+Q LE +G LF R T Sbjct: 1 MDLRHLRYFVAVAEERHFTRAAQRLHVSQPPLSQQIQALETELGVPLFTRGRGGVQRTAA 60 Query: 71 GIQLLGYARKILRFNDEACSSLM--FSNLQGVLTIGASDESADT-ILPFLLNRVSSVYPK 127 G LL AR IL + A + G L +G + T ++P LL + +P+ Sbjct: 61 GDALLPLARSILDAVEHAVAQTRQVGRGETGRLAVGFAGSMPFTDVMPRLLRDFRAAWPQ 120 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTT----HRPSAFKALNLRTSPTHWYCAAEYILQK 183 +ALD+R + + + L + +DL L ++ P A++ L Sbjct: 121 VALDLREQPSQSQIDDLLAHRLDLGFIRTTQLMHDPRLSTLVVQREPLLAALHADHPLAA 180 Query: 184 GEPI--------PLVLLDD--PSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGL 233 + P V+ + R LA +A +A +P + + AGL Sbjct: 181 RASLRLNDLRDQPFVIYSASLGAGLRQQTLALCAQAGFNPHIAQEVHEMPTLIGLISAGL 240 Query: 234 GVTARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQY 293 GV M L ++ TE LL + + ++ Sbjct: 241 GVGIVAASMQRAQLPWVAYRPLADVQASTEVLLVWRRDDPQPPLRNFIAQAKALLPQAAS 300 Query: 294 SPMSAPEGDDSL 305 +P + D + Sbjct: 301 APANPDGTDAAS 312 >UniRef50_Q4ZRN4 Regulatory protein, LysR:LysR, substrate-binding n=15 Tax=Proteobacteria RepID=Q4ZRN4_PSEU2 Length = 325 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 61/295 (20%), Positives = 116/295 (39%), Gaps = 13/295 (4%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + L+L+ L TF V +F+AAA + TQ AVS +++LE + +L R G+ Sbjct: 30 MRRLNLNHLHTFSLVIAHGSFSAAAERLHLTQPAVSLHVRQLEDQLKLQLIERVGKRLKP 89 Query: 68 TEHGIQLLGYARKILRFNDEACSSLM--FSNLQGVLTIGASDESADTILPFLLNRVSSVY 125 T G LL + +I ++A +L S + G + IG + +LP +L + + Sbjct: 90 TSAGTVLLEHIARIDAVVEDALQALSSHASGVAGKIAIGTGATACIHLLPPMLQALRRRF 149 Query: 126 PKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPS--AFKALNLRTSPTHWY-------CA 176 P+L + V + + +E +DL + T + + L Sbjct: 150 PELDVRVSTGNTEGILKAVEENLLDLALVTLPAASRSLHITPLLEDAFVAIFASSQRPMP 209 Query: 177 AEYILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 A ++ PLV+ + S R ++ A I + ++ A++ V A LG + Sbjct: 210 AHMTPERLSAQPLVVFEAGSSTRLLIDEWFLHAGIRVKPVMELGSIEAIKEMVAADLGYS 269 Query: 237 ARPVEMMSP--DLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 P ++ R L + L T + ++ + + A++ Sbjct: 270 IVPRMAVAALHHRRGLQMLPLATALSRTLGIALRQDKPVSKALRQVLDALQYLKR 324 >UniRef50_B9Z5R7 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z5R7_9NEIS Length = 293 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 63/291 (21%), Positives = 111/291 (38%), Gaps = 11/291 (3%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +DL L F V + AA + R QS ++ ++++LEQ +G +LF R GR +LT Sbjct: 1 MDLSDLTVFCTVVEAGGVTRAAERLHRVQSNITTRIRKLEQDLGVDLFEREGRQLVLTAD 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G +LLGYAR++L A L L G +G+ + +A T LP L+R YP++ L Sbjct: 61 GERLLGYARQLLGLAAAARDDLAGQRLGGRFRLGSMENTAATRLPLPLSRFHRDYPEVEL 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRPSA-----FKALNLRTSPTHWYCAAEYILQKGE 185 ++ + M + + EVD + + + A ++ + Sbjct: 121 ELSTGPSLPMCQRVLRGEVDAALVAEPVGGALDARLDSRLIGVEELVLVTALDHPPVRDA 180 Query: 186 P----IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVE 241 L+ +R + A + S+ A+ AG+GV P + Sbjct: 181 RDVAHDTLLAFQPGCGYRQRLEDWFAGAGRLPQRQVELSSYHAMLGCAAAGMGVALVPEK 240 Query: 242 MMS--PDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNP 290 ++ L+ P LL + S + + + Sbjct: 241 LLDQYAGQAALARHRLPPGTARAPTLLVWKRSQPRAVIMRFADYLIEDADA 291 >UniRef50_C6J455 LysR family transcriptional regulator n=2 Tax=Bacillales RepID=C6J455_9BACL Length = 307 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 52/302 (17%), Positives = 113/302 (37%), Gaps = 20/302 (6%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L L + +A+ F+ AA + Q ++SQQ+ +LEQ +G +LF R+ LT Sbjct: 1 MELRQLLYTLKIAEEKNFSRAADKLHIAQPSLSQQLSKLEQELGVKLFQRNTSTVELTYA 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G + +A+KI+ + + G + +G+ + +LP++L + YP + Sbjct: 61 GASFIAHAQKIMDAVAQLRQEMDDISQLRAGRVVVGSMPITGSHLLPYVLPAFKASYPNI 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKA--LNLRTSPTHWYCAAEYILQ---- 182 + + + + ++ DL + + + ++ L Sbjct: 121 QVTLLEDTSLNLEKLTAEGGTDLSLLSLPLLEPTLSYEPIGEEIIDLAVPPDHPLTKTPG 180 Query: 183 ---------KGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGL 233 + E P ++L FR M +A + + ++ + V++ V AG+ Sbjct: 181 VLEQGVEMKQLENEPFIVLKKGQGFRKMTADLCREAGFEPNVVFESNNIETVQSLVAAGM 240 Query: 234 GVTARPVEMMSP---DLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNP 290 G+T P + +L P T + ++ A+ + + Sbjct: 241 GITLVPRFIARAKRSELIPAYLPLAAPAPSRTLVIAYRKGRYLSKAAEAFIETFKKTMEE 300 Query: 291 WQ 292 Q Sbjct: 301 RQ 302 >UniRef50_C8WV81 Transcriptional regulator, LysR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WV81_ALIAD Length = 305 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 57/302 (18%), Positives = 118/302 (39%), Gaps = 16/302 (5%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + +DL LR FV V + N+F AA + +Q A+SQ +Q LEQ +G L R R + Sbjct: 1 MKRVDL-QLRVFVTVVEENSFTRAAEKLHISQPAISQHVQTLEQRLGVRLIDRGRRRLQV 59 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVY 125 G + +A++IL + G + +GAS + +LP ++ R Y Sbjct: 60 NPAGRIVYEHAKEILALYRRMERLIADMQEMPAGPVHVGASLTYGEYVLPHVIARFRKAY 119 Query: 126 PKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNL---RTSPTHWYCAAEYILQ 182 P + V + +A + +++D+ + + + L + Sbjct: 120 PAVQPSVSIANTQTIAHAVAVRQLDIGIVEGQDVVEDEVVLTPFAEDEMLVVASPASPWY 179 Query: 183 KGEP-------IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGV 235 P + + S R+M + I R ++ ++ +V AGLG+ Sbjct: 180 AEAPDRSLLERATWFIREPGSGTREMTDRLFTQLGIQPRDLVEYTSSQVIKESVAAGLGL 239 Query: 236 TARPVEMMSPDLR---VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQ 292 +++ +L + + P+ T ++ + + ++++Y + + +P Sbjct: 240 ACLSRWVVARELAWGMLRTLPIPCAPVKRTFSIVTPKSAFETKASKLLYSFLMEHGSPEN 299 Query: 293 YS 294 S Sbjct: 300 PS 301 >UniRef50_C7RSN5 Transcriptional regulator, LysR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RSN5_9PROT Length = 300 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 110/297 (37%), Gaps = 17/297 (5%) Query: 14 DLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQ 73 L+ F AVA +F A A+ TQ AV+ Q+++LE+ LF R G LT+ G Sbjct: 4 RRLQVFHAVAKHLSFTKAGEALHMTQPAVTFQIKQLEERFNTRLFDRGGGRIALTQAGEL 63 Query: 74 LLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALD 131 +L YA +IL + + + + G L +GAS A+ +LP +L + YP++ Sbjct: 64 VLDYAERILGLSADLDLRVAEMTGQMSGSLLVGASTTIAEFMLPPILGEFNVRYPQVRAR 123 Query: 132 VRVKRNAYMAEMLESQEVDLMVTTHRP--SAFKALNLRTSPTHWYCAAEYILQKGEPI-- 187 + V + ++ + + +D+ + + + C + L + + Sbjct: 124 LTVANSEAISNAIAAHTLDIGLVESLVNHPSLQCEVCGDDELQVICTPTHPLAQRTDVDA 183 Query: 188 ------PLVLLDDPSPFRDMVLATLNKADIPW---RLAYVASTLPAVRAAVKAGLGVTAR 238 + + S R++ L + + ++ A++ V GLG + Sbjct: 184 RSLMAHDFIAREPGSGTREVTDDYLRACGVEPAQIKTLMELASPEALKGVVATGLGFSIV 243 Query: 239 PVEMMSPD--LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQY 293 + L L + P L T L+ +++ + Sbjct: 244 SRASFEKERQLGSLVAIPLRPRLKRTLSLVYQKERFRSKVVLTFVDFARNKLRELSA 300 >UniRef50_C7RPQ0 Transcriptional regulator, LysR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RPQ0_9PROT Length = 303 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 64/303 (21%), Positives = 120/303 (39%), Gaps = 18/303 (5%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + N + L+ F A +FA AA + T +A+S Q+++LE + G LF R G+ L Sbjct: 1 MRNATIRQLQIFSVAASHLSFARAAEKLHLTHAAISLQIKQLEDVSGALLFERIGKRVFL 60 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVY 125 TE G LL + R+IL+ EA +L+ G + + + A+ P LL V Sbjct: 61 TEAGEILLDHTRQILQSLKEADEALLALKGLRGGRIAVAVAST-AEYFAPGLLAEFRKVQ 119 Query: 126 PKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNL--RTSPTHWYCAAEYILQ- 182 + + + + + +L EVDL + P+ A + P +A + L Sbjct: 120 ADVRIRLLIDNRDTVTRLLVGNEVDLAIMGRPPAELDATAVAFAPHPLVIVASAAHPLAG 179 Query: 183 -------KGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGV 235 L++ + S R + + I R+ + A++ AV AGLG+ Sbjct: 180 QANVAVEDLAGETLIVRETGSGTRSAMEEFFQERSIKPRIGMEMGSNEAIKQAVVAGLGI 239 Query: 236 TARPVEMMSPDLR----VLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPW 291 + + +L V+ V+G P + +++ + + + + + Sbjct: 240 SFISQHTLGLELSAARLVILKVEGTPVI-RRWHIVRHKNKHLTPALGAFWDFVLEFAPAY 298 Query: 292 QYS 294 Sbjct: 299 LRR 301 >UniRef50_C1ZI46 Transcriptional regulator, COG0583 n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZI46_PLALI Length = 292 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 66/288 (22%), Positives = 111/288 (38%), Gaps = 12/288 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L LR F+ A+L +F AAA +Q ++SQQ+ +LEQ +G+ LF R GR LTE Sbjct: 1 MELHQLRYFLKAAELKSFTLAAAECFISQPSLSQQIIKLEQELGQPLFERSGRGVELTES 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 G L A +I+ D+A + G LTIGA A +LP +++R V P++ L Sbjct: 61 GKLLQSRAGQIVSLVDQARREITDDGETGQLTIGAIPTIAPYLLPQIVSRFREVVPRVTL 120 Query: 131 DVRVKRNAYMAEMLESQEVDLMVTTHRP--SAFKALNLRTSPTHWYCAAEYILQKGEPIP 188 + + +++ E DL + + L + L +P Sbjct: 121 KIHEDVTEQCLKKVQAGEWDLAIAALPVRIEHLEVEPLFDEELWLAVPPGHRLSHLTEVP 180 Query: 189 --------LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV 240 L+LL + + V + D+ + L + V G GV+ P Sbjct: 181 VEEIDRETLLLLGEAHCLTEHVAQYCRRKDMAPLETGRLAQLTTIMELVSRGQGVSFIPN 240 Query: 241 EMMSPDLR-VLSGVDGLPPLPDTEYLLCYDP-SSNNELAQVIYQAMES 286 + D + P L ++ L + + Sbjct: 241 MCKAFDREGRCAYRPLQGDRPQRTIALVWNSYRFQTLLLKRALDVIRR 288 >UniRef50_B9XBB1 Transcriptional regulator, LysR family n=2 Tax=Verrucomicrobiales RepID=B9XBB1_9BACT Length = 299 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 63/299 (21%), Positives = 113/299 (37%), Gaps = 14/299 (4%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 ++L +R FVAVA+ +F AA + Q +S Q++ LE +G +LF R R+ LT Sbjct: 1 MELRHIRYFVAVAEELSFRRAAERLHLAQPPLSAQIKDLEGELGTKLFERTTRSVRLTAS 60 Query: 71 GIQLLGYARKILRFNDEACSSLMFSN--LQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L AR +L ++A + + L G L IG +A + L +L + +P + Sbjct: 61 GRVFLDEARAVLAAAEKAEQRVRKAEHGLVGTLRIGVLAPTATSRLATILRSYRNQFPGV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRP--SAFKALNLRTSPTHWYCAAEYILQKGE- 185 + + + L ++D+ + L SP A + L K Sbjct: 121 QFSLHEMTSVEQLQSLRLDQLDVGLLRPPVAFPELDFHFLEESPMVLAVPAGHRLAKQRL 180 Query: 186 -------PIPLVLLDDP--SPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVT 236 P+V++ + D L KA + A+ + + + AG GV Sbjct: 181 IEWKDFHNEPMVMIHPSLQHGYYDTFLNLCAKAGSTPIVGQYANDVHSKMWLISAGFGVA 240 Query: 237 ARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSP 295 + L + P LP + L+ + ++N+ + + P Sbjct: 241 PTTKTIAEVKRPGLVFRELPPGLPLVQTLIVWKRTNNSPMVGNFIECFSKLDKLTPSKP 299 >UniRef50_Q4ZQQ6 Regulatory protein, LysR:LysR, substrate-binding n=10 Tax=Pseudomonas RepID=Q4ZQQ6_PSEU2 Length = 304 Score = 233 bits (596), Expect = 5e-60, Method: Composition-based stats. Identities = 64/288 (22%), Positives = 116/288 (40%), Gaps = 13/288 (4%) Query: 13 LDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGI 72 L +R +AVAD F AA A+ +Q A+SQQ+++LE +G +LF R R+ + T+ G Sbjct: 15 LRHIRYLLAVADHGNFTRAAEALHVSQPALSQQIRQLESSLGVQLFDRTRRSVVPTDAGR 74 Query: 73 QLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFLLNRVSSVYPKLAL 130 L +AR+ L D +L +G L +G + ++ ++ L++R S++YP +A+ Sbjct: 75 VYLDHARRCLLELDAGKRALNDVSDLSRGQLRLGVTPTFSEYLIAPLIDRFSALYPGVAI 134 Query: 131 DVRVKRNAYMAEMLESQEVDLMV--TTHRPSAFKALNLRTSPTHWYCA-------AEYIL 181 + + E L S +DL + + L A A L Sbjct: 135 ILTELPLEQITEALISDALDLAIGFAGSHAVEIDSQPLFDEQLCLVMAKPASEKQAALTL 194 Query: 182 QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVE 241 + + + LL R ++ A + + A+++ + V G T P Sbjct: 195 EDLQALRFALLAPGFATRQLLDAWCQMQNFKPIIGLEANSIAILLKVVAQGRMATILPDA 254 Query: 242 MMSPDLRVLSGVDGLPPLPDTEYLLCYDP-SSNNELAQVIYQAMESYH 288 ++ L V +P LP L + A+ + + Sbjct: 255 IVRKQ-PGLCEVQTIPALPGRTVALLRRKNGYQSAAAKAFAKLVSDIR 301 >UniRef50_A9VZZ7 LysR substrate-binding n=2 Tax=Rhizobiales RepID=A9VZZ7_METEP Length = 298 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 63/288 (21%), Positives = 111/288 (38%), Gaps = 7/288 (2%) Query: 8 IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67 + +DLD L F V AA + R S V+ ++++ E+ +G LF R GR+ L Sbjct: 5 MRTMDLDDLHIFRCVVREGGVTRAAHQLHRVPSNVTTRIKQFEERLGVALFRREGRSLTL 64 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T+ G LLG+A K+L+ D A L ++GVL +G+ + +A LP +L+ + P Sbjct: 65 TDAGRTLLGHAEKLLQLADLAEQELRSGIVRGVLRLGSLESAAGARLPPILSAFHAQNPN 124 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHR--PSAFKALNLRTSPTHWYCAAEYI----L 181 + ++++ M LE EV+ + ++ A Sbjct: 125 VTIELQTGTTRAMLRQLERFEVEAAFVSEPFERGNLSSMPAFNEELVLITARGVPTVRQA 184 Query: 182 QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVE 241 + +V +R ++ L + + S+ A+ A V AG G P E Sbjct: 185 VELGGRTVVAFPHGCSYRQRLIEWLAEGGASPQRVLEMSSYHAIVACVAAGTGAAIVPAE 244 Query: 242 MMSPD-LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYH 288 ++ L LPP + + Q + + S Sbjct: 245 VLDHAVLSTAVERHALPPHLRINRTHLVWSGAASGPLQALIALLPSAR 292 >UniRef50_C8WUA0 Transcriptional regulator, LysR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WUA0_ALIAD Length = 298 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 102/294 (34%), Gaps = 14/294 (4%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 ++ +L L FVAVA+ F AA + TQ +SQQ+Q+LE +G LF R R LT Sbjct: 1 MDTELRQLEYFVAVAEELHFGRAAKRLGLTQPPLSQQIQKLEDEIGVTLFDRTNRRVQLT 60 Query: 69 EHGIQLLGYARKILRFND--EACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYP 126 G LL ARK+L + + G L++ + LP ++ +P Sbjct: 61 HAGRVLLEEARKVLAHVQTAVKAARDAAAGRVGRLSVAFVGSATYGWLPEVIRAYQERHP 120 Query: 127 KLALDVRVKRNAYMAEMLESQEVDLMVTTHRP--SAFKALNLRTSPTHWYCAAEYILQ-- 182 + L +R E L + E+D+ V + +E+ L Sbjct: 121 DVELVLREMSTPAQMEALTAGELDVGVLRLPAQHPDLHVRLVERDDCVAVVPSEHPLATR 180 Query: 183 ------KGEPIPLVLLDDP--SPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLG 234 + P VL+ D + R+ + + V AGLG Sbjct: 181 SSLFLVELAEEPFVLVSRAIWPGLYDGFITLARALGFEPRVRLEVTEVQTAVGLVAAGLG 240 Query: 235 VTARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYH 288 V+ P R + + P E + + + L ES Sbjct: 241 VSIVPSATERVHRRDVRYLHIDGQSPTVELGVAWRRRDTSPLVAAFLAMAESVR 294 >UniRef50_A4SIM7 Transcriptional regulator, LysR family n=3 Tax=Gammaproteobacteria RepID=A4SIM7_AERS4 Length = 297 Score = 233 bits (595), Expect = 8e-60, Method: Composition-based stats. Identities = 93/290 (32%), Positives = 148/290 (51%), Gaps = 7/290 (2%) Query: 10 NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69 NLDLD LR++V D +FA AA +CR+ SAVS Q+++LEQ G EL + GR+ + T Sbjct: 7 NLDLDALRSYVLGLDCGSFALAAQRLCRSTSAVSAQLKKLEQQCGTELVMKRGRHLVPTA 66 Query: 70 HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129 G +LLGYA+++L NDEA +L LQG + +G ++ +++LP +L + +P L Sbjct: 67 SGERLLGYAKRLLELNDEAVLALKGELLQGEIRLGVQEDFGESLLPAVLGPLCRQHPTLR 126 Query: 130 LDVRVKRNAYMAEMLESQEVDLMVTTHRPSA-FKALNLRTSPTHWYCAAEYI----LQKG 184 + R+ RNA + + + +D+ + P A + W + + L +G Sbjct: 127 MTTRIDRNAQLMKGIREGTLDMALAWQHPEERIDAHLIDLVSLQWIAHSNWDPAPLLARG 186 Query: 185 EPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMS 244 EP+PLVL D P R L L+ A IPWR+A+ + +L + AA++AGLG+T R M Sbjct: 187 EPLPLVLFDAPCLMRSRALKALDDAGIPWRIAFTSQSLGGIWAALQAGLGITVRSAIDMP 246 Query: 245 PDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYS 294 L L LP +L + + E + + + + Sbjct: 247 TSLSPL--AYVLPSPGTLGVVLLGAGNGSGEAERQLQSLLTQAVQRAHAT 294 >UniRef50_C7JCS7 Transcriptional regulator LysR n=11 Tax=Proteobacteria RepID=C7JCS7_ACEP3 Length = 313 Score = 232 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 71/315 (22%), Positives = 115/315 (36%), Gaps = 20/315 (6%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 +D+ LR FV VA+ + AA A+ Q +SQQ+++LE+ +G LF R R LTE Sbjct: 1 MDIRHLRYFVTVAEHGSITHAAEALGIEQPPLSQQIRQLERNLGVTLFERQTRGMKLTEI 60 Query: 71 GIQLLGYARKILRFNDEACSSLMF--SNLQGVLTIGASDESADTILPFL---LNRVSSVY 125 G LL AR IL + S+ +G + +G + A +LP + + R + Sbjct: 61 GEVLLPRARTILDLQAQFLSTAEGLARGERGHIRVGLAG--AVPLLPVIPLTIRRFREMA 118 Query: 126 PKLALDVRVKRNAYMAEMLESQEVDLMVTTHR---PSAFKALNLRTSPTHWYCAAEYILQ 182 P + L + + L VD+ + PS +L PT + L Sbjct: 119 PDVTLSLEESNTPALCAALHEPSVDIAIIRPPFTDPSRLSVFHLLDEPTVIALPRGHRLA 178 Query: 183 KG--------EPIPLVLLDD--PSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAG 232 K PL++ F D +L+ A + + A + V AG Sbjct: 179 KEPIISLDMVADDPLIIFPRELGPGFHDAILSAYQLAGVTPTMGQQAPQIAGTVPLVAAG 238 Query: 233 LGVTARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQ 292 LGV+ P + ++ P P + N L + + W+ Sbjct: 239 LGVSVVPRSLSQIHAGGVTFHAISEPAPRATLAVAIRTGQNMPLVTRFVTVLRTACRKWE 298 Query: 293 YSPMSAPEGDDSLLI 307 DS + Sbjct: 299 QRQHDTAPFADSENL 313 >UniRef50_D2LGY9 Transcriptional regulator, LysR family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LGY9_RHOVA Length = 311 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 77/285 (27%), Positives = 133/285 (46%), Gaps = 9/285 (3%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR-HGRNKLL 67 + L+ LR FV VA+ +FA A+ + RTQSAV+Q +++LEQ++ L R G L Sbjct: 14 RRITLEQLRAFVMVAEGGSFAGASLDLGRTQSAVTQSLKKLEQILDCVLLERRQGHFAGL 73 Query: 68 TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127 T G + L A++IL +A S L G + +G D+ + +L+R + P+ Sbjct: 74 TIEGARFLPMAKEILARLSDAVGSFQRPPLAGRIRLGVPDDFDVLDIHGVLSRCLDMNPE 133 Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTH------RPSAFKALNLRTSPTHWYCAAEYIL 181 L ++V + + +M + E+D+ + LR+ P W + L Sbjct: 134 LRIEVTSAMSGTIVDMFNAGEIDVALLNRARGESPNVGGAPRKVLRSEPLFWVGREKSAL 193 Query: 182 QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVE 241 + +PLV +R +L + + P LAY +S+ +R AV AGLG+ P Sbjct: 194 GQFSTVPLVGFPGGCTYRKTMLLAMQRVGKPSYLAYTSSSYENIRKAVSAGLGIAVLPRG 253 Query: 242 MMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMES 286 + D +L + PPLP+ E ++ + ++L + +ES Sbjct: 254 SVGRDHVILGAEEDFPPLPEAELVMVANAR--DDLYRKFAAFLES 296 >UniRef50_C9RA29 Transcriptional regulator, LysR family n=1 Tax=Ammonifex degensii KC4 RepID=C9RA29_AMMDK Length = 295 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 79/294 (26%), Positives = 124/294 (42%), Gaps = 22/294 (7%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + L L+TFV +AD +F+ AA + TQ AVS+ + LE +G +L R R LTE Sbjct: 1 MKLSWLKTFVLIADKGSFSLAAKELDLTQPAVSKHIALLEAHLGVKLIDRDQRQVTLTEA 60 Query: 71 GIQLLGYARKILRFNDEACSSLM--FSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LL YAR I++ +EA ++ ++++G L IGAS +LP L+ R YP++ Sbjct: 61 GQALLPYARTIIKTLEEAEQAVRNLSASVRGTLNIGASTIPGHYVLPQLIRRFRERYPQV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRP--SAFKALNLRTSPTHWYCAAEYILQKGEP 186 +++ + + + + ++ L P A +A+ T + L E Sbjct: 121 QVNLEIADTEKVWQQVLEHKICLGAVGAPPSSPALEAVPFATDEIVLVLPTPHPLAGKEV 180 Query: 187 I--------PLVLLDDPSPFRDMVLATLNKADIPW---RLAYVASTLPAVRAAVKAGLGV 235 I LV + S R V L + P R+ ST AV AAV+AGLG Sbjct: 181 IPLELLPQLELVGREKGSGTRQTVEERLRQKGFPPERLRVVAEFSTTEAVLAAVEAGLGG 240 Query: 236 TARPVEMMSPDLRVLSGVDGLPPL-----PDTEYLLCYDPSSNNELAQVIYQAM 284 + R G + L YL+ + LA++ Sbjct: 241 AFVSRWA--AESRRHKGNLCICRLEGISFERKLYLVYSRHRTLPHLARLFLNFA 292 >UniRef50_A6UC84 Transcriptional regulator, LysR family n=5 Tax=Alphaproteobacteria RepID=A6UC84_SINMW Length = 296 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 69/279 (24%), Positives = 125/279 (44%), Gaps = 4/279 (1%) Query: 9 INLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT 68 L++D LR A+ AA A+ +QSAVS +++RLE + +L +R + T Sbjct: 7 RRLEIDALRALWAIRHHGGITRAAEALGLSQSAVSHKIKRLETSLDCDLLSRRSGGPVFT 66 Query: 69 EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G LL YA +IL +DEA SL + L G + +G ++++ T L +L R ++P + Sbjct: 67 SAGEDLLDYAGRILGLHDEALLSLSKTQLAGRIALGLTEDTTCTDLARILGRFRRLHPHV 126 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMV--TTHRPSAFKALNLRTSPTHWYCAAEYILQKGEP 186 ++ ++V+ + + MLE E+D + + L HW + L + P Sbjct: 127 SVRIKVRMSLVLRAMLERGELDAAIVQVFSHEVRPTDVVLFRENLHWVKHPDLCLPQNGP 186 Query: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246 IP + DD +R L + ++ + AAVK+ LGV + + Sbjct: 187 IPFLSFDDECFYRKWALDVGQDGGTILETVFECASAAGIVAAVKSALGVALLSERHLRAE 246 Query: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285 +++++ D LP P Y++ + + +E Sbjct: 247 MQIVT--DRLPAPPALVYVVRRARKARIPALDTLIAEIE 283 >UniRef50_Q1AUB8 Transcriptional regulator, LysR family n=2 Tax=Bacteria RepID=Q1AUB8_RUBXD Length = 320 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 70/302 (23%), Positives = 118/302 (39%), Gaps = 15/302 (4%) Query: 14 DLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQ 73 L F+AVA + AA + TQ ++ +++ LE+ +G +LF R R LTE G + Sbjct: 4 RQLECFLAVARTGNLSRAAEEMYLTQPTLTARLKALEEELGDQLFVRTSRGMRLTEAGRE 63 Query: 74 LLGYARKILRFNDEACSSL--MFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALD 131 L YA +++ +E L + G L +GAS LP LL R YPK+ + Sbjct: 64 FLPYAERVVSSFEEGKRRLEELRGASGGKLVVGASPGVGTYALPGLLERFVGAYPKVNVS 123 Query: 132 VRVKRNAYMAEMLESQEVDLMVTTH-RPSAFKALNLRTSPTHWYCAAEYI--------LQ 182 VR + + EM+ +EV L +T R +++ L A E+ L Sbjct: 124 VRTGHSEDILEMVLREEVHLGLTREMRHPEVESVPLYEDELVLVVAPEHRFTQRGSAGLA 183 Query: 183 KGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVE- 241 + L+L D+ S + + A A I + A + V+ LG+ P Sbjct: 184 EIGEEQLILFDNDSSYYEQTQALFTSAGIRELRTLEVDNIEAAKRMVEHRLGIAFLPRSA 243 Query: 242 ---MMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSA 298 +S VL V+ P + + L + + + + + + Sbjct: 244 IVRAVSAGNLVLIRVEDGPEMTRSIVALRRRDAPASGPVRAFLELAYGMAERKEERTKLS 303 Query: 299 PE 300 P Sbjct: 304 PA 305 >UniRef50_A7IBY1 Transcriptional regulator, LysR family n=15 Tax=Alphaproteobacteria RepID=A7IBY1_XANP2 Length = 313 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 71/290 (24%), Positives = 112/290 (38%), Gaps = 16/290 (5%) Query: 11 LDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEH 70 + L+ LR FVAVA+ A + TQSA S + LE +LF R GR +LTE Sbjct: 1 MTLEQLRIFVAVAEREHVTQGARDLNLTQSATSAAIAALEARYATKLFDRVGRRIVLTEA 60 Query: 71 GIQLLGYARKILRFNDEACSSLM--FSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128 G L A+ +L A L +G L I AS A+ LP + R S +P + Sbjct: 61 GRLFLSEAKAVLARVHAAEKVLTDLADLTRGSLVIAASQTIANYWLPPFIKRFRSQFPGV 120 Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHR--PSAFKALNLRTSPTHWYCAAEYIL----- 181 A+ + + +A + DL + + ++ Sbjct: 121 AITLTIDNTDGVARRINEGLADLGLVEGEIDDPSVSVAPFAEDELVLVVPPDHAWAHDPR 180 Query: 182 ---QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWR---LAYVASTLPAVRAAVKAGLGV 235 + P VL + S R + TL++ + R ++ + AVR+AV+AG GV Sbjct: 181 RQPAELGVGPWVLREHGSGTRAIFETTLSQFGLAPRDLAISLELPSNEAVRSAVEAGAGV 240 Query: 236 TARPVEMMSPDLRVLSGVDGLPPLPDTE-YLLCYDPSSNNELAQVIYQAM 284 T ++S L+ S V LP + L + S + + Sbjct: 241 TVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLI 290 >UniRef50_Q4KF30 Transcriptional regulator, LysR family n=5 Tax=Proteobacteria RepID=Q4KF30_PSEF5 Length = 286 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 92/275 (33%), Positives = 136/275 (49%) Query: 15 LLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQL 74 LLRTFVAV D F+ AA + TQSAVS ++RLEQ VGK L R R++ LT G +L Sbjct: 6 LLRTFVAVVDEQGFSRAALKLHLTQSAVSGHLRRLEQQVGKPLLQRTTRSQQLTADGERL 65 Query: 75 LGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVRV 134 + YAR IL N +A + L G + +G S++ AD L L + YP + LDV+V Sbjct: 66 MAYARAILALNRDAWTELTRVPFHGRVGVGLSEDFADPRLLRALQDFAGRYPGIRLDVQV 125 Query: 135 KRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLVLLDD 194 + ++L + L+V + +A L + P W + +P+PL L + Sbjct: 126 GIPGTLLDLLAQGNLQLVVGSLCETAEPGRLLWSEPLVWAGLVQPAGLLPDPLPLALFPE 185 Query: 195 PSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGVD 254 P P+R L L +A I R + S+ A+RAAV +G + + L L Sbjct: 186 PCPYRAAALGRLAQAGIAQRTVMLCSSNWALRAAVLSGFAIAPMAASQLGAGLCTLGEEY 245 Query: 255 GLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHN 289 GLPPLPD +Y L P ++ + + + Y + Sbjct: 246 GLPPLPDAQYRLFTAPEADQTVLAALSEVFVEYCS 280 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.191 0.581 Lambda K H 0.267 0.0586 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,655,678,794 Number of Sequences: 3077464 Number of extensions: 184303011 Number of successful extensions: 604937 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 19002 Number of HSP's successfully gapped in prelim test: 3216 Number of HSP's that attempted gapping in prelim test: 549139 Number of HSP's gapped (non-prelim): 24428 length of query: 312 length of database: 1,040,396,356 effective HSP length: 128 effective length of query: 184 effective length of database: 646,480,964 effective search space: 118952497376 effective search space used: 118952497376 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 94 (40.3 bits)