9 c1uarA_ Probab=100.00  E-value=0  Score=410.39  Aligned_columns=261  Identities=29%

Q ss_pred             CCEECHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCCEEECHHHHHHCCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf             86036999998608996799980377533345663889982479973880778951001676756899899999999658
Q batch____         4 TWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELG   83 (281)
Q Consensus         4 ~~lV~~~~L~~~l~~~~~~iiDvR~~~~~~~~~~~~~~y~~gHIpgAi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg   83 (281)
                      ++||+|+||+++|++++++|||||+         +.++|.+||||||+++|+..+.  ..+..+++++.++|+++++.+|
T Consensus         6 ~~lVs~~~L~~~l~~~~~~iiD~R~---------~~~~y~~gHIpgAi~i~~~~~~--~~~~~~~~~~~~~~~~~~~~lg   74 (275)
T c1uarA_           6 EVLVSTDWVQEHLEDPKVRVLEVDE---------DILLYDTGHIPGAQKIDWQRDF--WDPVVRDFISEEEFAKLXERLG   74 (275)
T ss_dssp             GGEECHHHHHTTTTCTTEEEEEECS---------STTHHHHCBCTTCEEECHHHHH--BCSSSSSBCCHHHHHHHHHHTT
T ss_pred             CCEECHHHHHHHCCCCCEEEEECCC---------CHHHHHHCCCCCCEEECHHHHC--CCCCCCCCCCHHHHHHHHHHCC
T ss_conf             8600799999861899759998388---------6799971779985881734511--3523355678789999998558


Q ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC----HHH
Q ss_conf             9998889998189740059999999983894057613611679976982103665454333111357655589----999
Q batch____        84 VNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVK----VTD  159 (281)
Q Consensus        84 i~~~~~VVvy~~~~~~~a~r~~~~l~~~G~~~v~vL~GG~~aW~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~  159 (281)
                      |+++++|||||++++++|.|+||+|+++||+||++|+||+++|+++|+++.++.+...+..+...........    ..+
T Consensus        75 i~~~~~VVvy~~~~~~~a~r~~~~l~~~G~~~v~vl~GG~~aW~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (275)
T c1uarA_          75 ISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLXNGGRQKWVEEGRPLTTEVPSYPPGRYEVPYRDESIRAYRDDVLE  154 (275)
T ss_dssp             CCTTCEEEEECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCBCCCCCCCCCCCCCCCCCGGGEECHHHHHH
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf             89988799983997533899999999728972588188668999879850004554556666556675432136788999


Q ss_pred             HHHHHCCCCEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCC-CCCCCCHHHHHHHHHHCCCCCCCEEEEEC
Q ss_conf             99950689759996589888322223333221137437660586303356-58548999999998854888888799986
Q batch____       160 VLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVR-EGELKTTDELDAIFFGRGVSYDKPIIVSC  238 (281)
Q Consensus       160 ~~~~~~~~~~~iiD~R~~~e~~g~~~~~~~~~~~GhIpga~~~~~~~~~~-~~~~~~~~~l~~~~~~~~i~~~~~vvvyC  238 (281)
                      .....+..+++|||+|++.||.+...+.   .+.||||+++++++..+.. ++.++|.++|++++.+++++++++||+||
T Consensus       155 ~~~~~~~~~~~iiD~R~~~ey~g~~~~~---~~~ghip~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~gi~~~~~ivvyC  231 (275)
T c1uarA_         155 HIIKVKEGKGALVDVRSPQEYRGELEGA---LRAGHIPGAKNIPWAKAVNPDGTFKSAEELRALYEPLGITKDKDIVVYR  231 (275)
T ss_dssp             HHHHHHTTSEEEEECSCHHHHHTCCCCC---SCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHHGGGTCCTTSEEEECC
T ss_pred             HHHHCCCCCEEEEECCCHHHHCCCCCCC---CCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEC
T ss_conf             9982157986999669877831123432---1124435431002133100126546979999998855888887699982


Q ss_pred             CCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHCCCCCCC
Q ss_conf             9977799999999985899708848988898616789888
Q batch____       239 GSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVE  278 (281)
Q Consensus       239 ~sG~ra~~~~~~L~~~G~~~v~~Y~Gs~~eW~~~~~~P~~  278 (281)
                      ++|.||+.++++|+.+||+||++|+|||.||+++++||||
T Consensus       232 ~~G~ra~~~~~~L~~~G~~nv~~Y~Gs~~eW~~~~~lPv~  271 (275)
T c1uarA_         232 IAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIA  271 (275)
T ss_dssp             CHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCB
T ss_pred             CCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHCCCCCCC
T ss_conf             9988899999999985899808858988899717799732