71 d1in4a2 Probab=99.45   E-value=1.1e-10  Score=90.20  Aligned_columns=210  Identities=17%

Q ss_pred             HHHHCCCCCCEEECCHHHHHHHHHHH---HHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHH
Q ss_conf             33201666751344989999999999---871579969998889986899999998507424797699982328987988
Q batch____       337 QLLSNLGIGDIIYQSQAMEDLLQQVD---IVAKSDSTVLICGETGTGKEVIARAIHQLSPRRDKPLVKINCAAIPASLLE  413 (670)
Q Consensus       337 ~l~~~~~~~~lig~S~~~~~~~~~i~---~~a~~~~pvli~Ge~GtGK~~~A~~iH~~s~~~~~~~~~i~c~~~~~~~~~  413 (670)
                      ++..--+|.|+||++...+.+..-+.   .-.....++||+|++||||+++|+++...-   ..+|+.++|.........
T Consensus         1 ~~~RP~~~~~iiG~~~~~~~l~~~i~~~~~~~~~~~~iLl~GppG~GKT~la~~ia~~l---~~~~~~~~~~~~~~~~~~   77 (223)
T d1in4a2           1 QFLRPKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASEL---QTNIHVTSGPVLVKQGDM   77 (223)
T ss_dssp             CTTSCSSGGGCCSCHHHHHHHHHHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHHHH---TCCEEEEETTTCCSHHHH
T ss_pred             CCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHH---CCCEEEEEECCEEEECCC
T ss_conf             98789988780360999999999999987368757738997589978647999999984---898799841000110000


Q ss_pred             HHHCCCCCCCCCCCCCCCCCHHHHCCCCEEEEECHHHCCHHHHHHHHHHHHCCCEEECCCCCEECCCCEEEEECCCCHHH
Q ss_conf             88728677766675434668477527981898234678899999999997129486758887201581499836999789
Q batch____       414 SELFGHDKGAFTGAINTHRGRFEIADGGTLFLDEIGDLPLELQPKLLRVLQEREIERLGGSRTIPVNVRVIAATNRDLWQ  493 (670)
Q Consensus       414 ~~lfg~~~~~~~~~~~~~~g~~~~a~~Gtl~l~~i~~l~~~~Q~~l~~~l~~~~~~~~~~~~~~~~~~r~i~~s~~~l~~  493 (670)
                      ...                 .......+.+++++++.+..+.+..++..++..        ......+.+|..++.    
T Consensus        78 ~~~-----------------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~i~~~~~----  128 (223)
T d1in4a2          78 AAI-----------------LTSLERGDVLFIDEIHRLNKAVEELLYSAIEDF--------QIDIQPFTLVGATTR----  128 (223)
T ss_dssp             HHH-----------------HHHCCTTCEEEEETGGGCCHHHHHHHHHHHHTS--------CCCCCCCEEEEEESC----
T ss_pred             HHH-----------------HHHHCCCCCEECCCCCCCCHHHHHHHHHHHHCC--------CCCCCCEEEEEECCC----
T ss_conf             123-----------------555303550110000024888999999998401--------002278069996068----


Q ss_pred             HHHCCCCCHHHHHHCCEEEEECCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf             98779840578873070388408712280007999999999999982769987898999998638978807899999999
Q batch____       494 MVEDRQFRSDLFYRLNVFPLELPPLRDRPEDIPLLAKHFTQKMARHMNRAIDAIPTEALRQLMSWDWPGNVRELENVIER  573 (670)
Q Consensus       494 l~~~~~~~~~L~~~l~~~~i~iPpLreR~eDi~~l~~~~l~~~~~~~~~~~~~~s~~a~~~L~~y~WpgNi~eL~~vi~~  573 (670)
                        ........+........+..|...++..        ++...+...+..   ++++++..+..+ +.|+.|...+.++.
T Consensus       129 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------il~~~~~~~~~~---~~~~~l~~i~~~-~~g~~R~~~~~l~~  194 (223)
T d1in4a2         129 --SGLLSSPLRSRFGIILELDFYTVKELKE--------IIKRAASLMDVE---IEDAAAEMIAKR-SRGTPRIAIRLTKR  194 (223)
T ss_dssp             --GGGSCHHHHTTCSEEEECCCCCHHHHHH--------HHHHHHHHTTCC---BCHHHHHHHHHT-STTCHHHHHHHHHH
T ss_pred             --CCCCCCHHHHHHHCCCCCCCCCHHHHHH--------HHHHHHHHCCCC---CCHHHHHHHHHH-CCCCHHHHHHHHHH
T ss_conf             --5323402332100002246999899999--------999999862899---876899999997-19998999999999


Q ss_pred             H---HHHCCCCCCCHHHHHHHH
Q ss_conf             9---996589800666732221
Q batch____       574 A---VLLTRGNSLNLHLNVRQS  592 (670)
Q Consensus       574 ~---~~~~~~~~i~~~~~~~~~  592 (670)
                      +   ......+.|+..+.....
T Consensus       195 ~~~~a~~~~~~~it~~~v~~~l  216 (223)
T d1in4a2         195 VRDMLTVVKADRINTDIVLKTM  216 (223)
T ss_dssp             HHHHHHHHTCSSBCHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCHHHHHHHH
T ss_conf             9999997088987989999999