30 c1in8A_ Probab=99.80   E-value=2.8e-16  Score=128.00  Aligned_columns=257  Identities=19%

Q ss_pred             CCCCEEECCHHHHHHHHHHHHH---HCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCC
Q ss_conf             6675134498999999999987---1579969998889986899999998507424797699982328987988887286
Q batch____       343 GIGDIIYQSQAMEDLLQQVDIV---AKSDSTVLICGETGTGKEVIARAIHQLSPRRDKPLVKINCAAIPASLLESELFGH  419 (670)
Q Consensus       343 ~~~~lig~S~~~~~~~~~i~~~---a~~~~pvli~Ge~GtGK~~~A~~iH~~s~~~~~~~~~i~c~~~~~~~~~~~lfg~  419 (670)
                      +|.|+||+..+++.+...+...   .....+|+|+|++||||+++|++|+...   +.+|+.++|............+  
T Consensus         7 ~~~d~iG~e~~~~~L~~~i~~~~~~~~~~~~ill~GppGtGKT~la~~ia~~l---~~~~~~i~~~~~~~~~~~~~~~--   81 (298)
T c1in8A_           7 SLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASEL---QTNIHVTSGPVLVKQGDMAAIL--   81 (298)
T ss_dssp             SGGGCCSCHHHHHHHHHHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHHHH---TCCEEEEETTTCCSHHHHHHHH--
T ss_pred             CHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHC---CCCEEEEECCCCCCCHHHHHHH--
T ss_conf             97781270999999999999986338888857998698898889999999970---9979999415533201245668--


Q ss_pred             CCCCCCCCCCCCCCHHHHCCCCEEEEECHHHCCHHHHHHHHHHHHCCCEEECCCCCEECCCCEEEEECCCCHHHHHHCCC
Q ss_conf             77766675434668477527981898234678899999999997129486758887201581499836999789987798
Q batch____       420 DKGAFTGAINTHRGRFEIADGGTLFLDEIGDLPLELQPKLLRVLQEREIERLGGSRTIPVNVRVIAATNRDLWQMVEDRQ  499 (670)
Q Consensus       420 ~~~~~~~~~~~~~g~~~~a~~Gtl~l~~i~~l~~~~Q~~l~~~l~~~~~~~~~~~~~~~~~~r~i~~s~~~l~~l~~~~~  499 (670)
                                     .....++.+|+++++.++.+.|+.++..++..       .......+.++.....+.........
T Consensus        82 ---------------~~~~~~~il~~dei~~l~~~~~~~l~~~l~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (298)
T c1in8A_          82 ---------------TSLERGDVLFIDEIHRLNKAVEELLYSAIEDF-------QIDIQPFTLVGATVRSGLLSSPLRSR  139 (298)
T ss_dssp             ---------------HTCCTTCEEEEETGGGCCHHHHHHHHHHHHHS-------CCCCCCCEEEEEESCGGGSCHHHHTT
T ss_pred             ---------------HHHCCCCEEEEEEHHHCCHHHHHHHHHHHHCC-------CCCCCEEEECCCCCCHHHCCCHHHHH
T ss_conf             ---------------85137998999423676989999999997055-------33444066526545856314643323


Q ss_pred             CCHHHHHHCCEEEEECCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf             40578873070388408712280007999999999999982769987898999998638978807899999999999658
Q batch____       500 FRSDLFYRLNVFPLELPPLRDRPEDIPLLAKHFTQKMARHMNRAIDAIPTEALRQLMSWDWPGNVRELENVIERAVLLTR  579 (670)
Q Consensus       500 ~~~~L~~~l~~~~i~iPpLreR~eDi~~l~~~~l~~~~~~~~~~~~~~s~~a~~~L~~y~WpgNi~eL~~vi~~~~~~~~  579 (670)
                      +.       ..+.+..|+..+        ...++...+.+.+..   ++.+++..+..+ |+||+|++.+++++++..+.
T Consensus       140 ~~-------~~~~~~~~~~~~--------~~~~~~~~~~~~~~~---~~~~~~~~i~~~-~~g~~R~~~~ll~~~~~~~~  200 (298)
T c1in8A_         140 FG-------IILELDFYTVKE--------LKEIIKRAASLMDVE---IEDAAAEMIAKR-SRGTPRIAIRLTKRVRDMLT  200 (298)
T ss_dssp             CS-------EEEECCCCCHHH--------HHHHHHHHHHHTTCC---BCHHHHHHHHHT-STTCHHHHHHHHHHHHHHHH
T ss_pred             HH-------HHCCCCCCCHHH--------HHHHHHHHHHHCCCC---CCHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHH
T ss_conf             44-------311367898999--------999999999982985---588999999998-39998999999999999998


Q ss_pred             ---CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHH
Q ss_conf             ---98006667322211344445543433223335666489999999999999999937867637899988489988999
Q batch____       580 ---GNSLNLHLNVRQSRLLPTLNEDSALRSSMAQLLHPTTPENDEEERQRIVQVLRETNGIVAGPRGAATRLGMKRTTLL  656 (670)
Q Consensus       580 ---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Er~~i~~aL~~~~G~~~n~~~aA~~LGisR~tL~  656 (670)
                         ...|+.+++..............                 .+.+++.+...+...+++.......|+.||++.+++.
T Consensus       201 ~~~~~~i~~~~i~~~~~~~~~~~~~~-----------------~~~~~~~~~~l~~~~~~~~~~~~~ia~~l~~~~~~~~  263 (298)
T c1in8A_         201 VVKADRINTDIVLKTMEVLNIDDEGL-----------------DEFDRKILKTIIEIYRGGPVGLNALAASLGVEADTLS  263 (298)
T ss_dssp             HHTCSSBCHHHHHHHHHHHTCCTTCC-----------------CHHHHHHHHHHHHHSTTCCBCHHHHHHHHTSCHHHHH
T ss_pred             HCCCCCCCHHHHHHHHHHHCCCCHHH-----------------HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHH
T ss_conf             52988769899999997512551011-----------------1468999999999817695479999998599989999


Q ss_pred             HHHHHH
Q ss_conf             999981
Q batch____       657 SRMQRL  662 (670)
Q Consensus       657 rklk~~  662 (670)
                      .+++.|
T Consensus       264 ~~~~~~  269 (298)
T c1in8A_         264 EVYEPY  269 (298)
T ss_dssp             HTTHHH
T ss_pred             HHHHHH
T ss_conf             997657