BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (799 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P76129 Heme-regulated cyclic di-GMP, cyclic AMP phospho... 1653 0.0 UniRef50_C1DIM2 Cyclic di-GMP signal transduction protein n=5 Ta... 593 e-168 UniRef50_C6C676 Diguanylate cyclase/phosphodiesterase with PAS/P... 578 e-163 UniRef50_C8KHS7 Putative phosphodiesterase/diguanylate cyclase n... 552 e-155 UniRef50_A7IPE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 416 e-114 UniRef50_B5ZGV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 413 e-113 UniRef50_A5ETK5 Diguanylate cyclase/phosphodiesterase with PAS/P... 402 e-110 UniRef50_Q13IZ7 Putative diguanylate cyclase(GGDEF)/ phosphodies... 400 e-109 UniRef50_Q68YD5 PDEA1 n=5 Tax=Gluconacetobacter RepID=Q68YD5_ACEXY 387 e-106 UniRef50_A9BW89 Diguanylate cyclase/phosphodiesterase with PAS/P... 386 e-105 UniRef50_D2UAD2 Hypothetical c-di-gmp phosphodiesterase or signa... 379 e-103 UniRef50_Q1LL50 Diguanylate cyclase/phosphodiesterase with PAS/P... 367 e-100 UniRef50_B1KCF3 Diguanylate cyclase/phosphodiesterase with PAS/P... 356 3e-96 UniRef50_B2SVB0 C-di-GMP phosphodiesterase A n=11 Tax=Xanthomona... 337 2e-90 UniRef50_C4UW07 Phosphodiesterase n=1 Tax=Yersinia rohdei ATCC 4... 336 2e-90 UniRef50_C4T5P6 Phosphodiesterase n=8 Tax=Yersinia RepID=C4T5P6_... 322 3e-86 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 322 5e-86 UniRef50_B1XYS1 Diguanylate cyclase/phosphodiesterase with PAS/P... 311 5e-83 UniRef50_B5ZF69 Diguanylate cyclase/phosphodiesterase n=2 Tax=Gl... 310 1e-82 UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 310 2e-82 UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuni... 306 2e-81 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 303 3e-80 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 300 2e-79 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 298 4e-79 UniRef50_B8GPC4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 297 1e-78 UniRef50_Q2W3S8 Predicted signal transduction protein containing... 297 1e-78 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 293 1e-77 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 292 4e-77 UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase... 292 4e-77 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 291 1e-76 UniRef50_C8QI00 Diguanylate cyclase/phosphodiesterase with PAS/P... 290 1e-76 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 290 1e-76 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 289 2e-76 UniRef50_Q21WZ6 Response regulator receiver modulated diguanylat... 288 4e-76 UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/P... 288 5e-76 UniRef50_A1SZV0 Response regulator receiver modulated diguanylat... 288 7e-76 UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax... 287 1e-75 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 287 1e-75 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 286 3e-75 UniRef50_C1DPF7 Intracellular signalling protein with diguanylat... 286 3e-75 UniRef50_C6E011 Response regulator receiver modulated diguanylat... 285 4e-75 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 285 5e-75 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 285 6e-75 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 285 6e-75 UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/P... 285 7e-75 UniRef50_C5D6R4 Diguanylate cyclase/phosphodiesterase with PAS/P... 284 9e-75 UniRef50_D2LY77 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ba... 284 9e-75 UniRef50_Q1GXN7 Diguanylate cyclase/phosphodiesterase n=3 Tax=Pr... 283 1e-74 UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 T... 283 2e-74 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 283 2e-74 UniRef50_B8G9I9 Diguanylate cyclase/phosphodiesterase with PAS/P... 283 2e-74 UniRef50_Q1K1R0 Response regulator receiver modulated diguanylat... 283 2e-74 UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 ... 283 2e-74 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 282 3e-74 UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/P... 282 4e-74 UniRef50_Q2B961 Putative uncharacterized protein n=1 Tax=Bacillu... 282 4e-74 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 281 7e-74 UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Maripro... 281 7e-74 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 281 8e-74 UniRef50_Q2BPN3 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 281 8e-74 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 280 1e-73 UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 280 1e-73 UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/P... 280 1e-73 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 280 1e-73 UniRef50_A6CPZ0 Putative uncharacterized protein n=1 Tax=Bacillu... 280 1e-73 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 279 3e-73 UniRef50_C4KCC9 Response regulator receiver modulated diguanylat... 279 3e-73 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 279 3e-73 UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/P... 279 3e-73 UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 279 3e-73 UniRef50_Q7NVN4 Putative uncharacterized protein n=1 Tax=Chromob... 279 4e-73 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 279 4e-73 UniRef50_C1DB08 Predicted signal transduction protein containing... 279 4e-73 UniRef50_C6QP03 Diguanylate cyclase/phosphodiesterase with PAS/P... 278 4e-73 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 278 5e-73 UniRef50_Q2SDR7 Predicted signal transduction protein containing... 278 5e-73 UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 278 8e-73 UniRef50_Q1JXT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 277 1e-72 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 277 1e-72 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 277 1e-72 UniRef50_C7RQ11 Response regulator receiver modulated diguanylat... 277 1e-72 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 277 1e-72 UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n... 277 1e-72 UniRef50_A6W3B3 Diguanylate cyclase/phosphodiesterase with PAS/P... 277 1e-72 UniRef50_A0JVV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 276 2e-72 UniRef50_Q12PF1 Diguanylate cyclase/phosphodiesterase with PAS/P... 276 2e-72 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 276 2e-72 UniRef50_Q2SG37 Predicted signal transduction protein containing... 276 2e-72 UniRef50_D2LYI1 Diguanylate cyclase/phosphodiesterase with extra... 276 2e-72 UniRef50_D0J3T4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Bu... 276 2e-72 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 276 2e-72 UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiat... 276 2e-72 UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 276 3e-72 UniRef50_Q2BL49 Sensory box/GGDEF domain/EAL domain protein n=2 ... 276 3e-72 UniRef50_D0J743 Diguanylate cyclase/phosphodiesterase n=3 Tax=Co... 276 3e-72 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 275 3e-72 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 275 4e-72 UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=... 275 4e-72 UniRef50_A1WT40 Diguanylate cyclase/phosphodiesterase with PAS/P... 275 4e-72 UniRef50_B6BGA2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 275 4e-72 UniRef50_B6R9S7 Response regulator receiver modulated diguanylat... 275 5e-72 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 275 6e-72 UniRef50_Q47FF8 Diguanylate cyclase/phosphodiesterase with PAS/P... 275 6e-72 UniRef50_B6IWY2 Diguanylate cyclase, putative n=1 Tax=Rhodospiri... 275 7e-72 UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 274 8e-72 UniRef50_Q30P04 Diguanylate cyclase/phosphodiesterase n=1 Tax=Su... 274 8e-72 UniRef50_Q31NI4 Response regulator receiver modulated diguanylat... 274 8e-72 UniRef50_Q0AAW8 Diguanylate cyclase/phosphodiesterase with PAS/P... 274 9e-72 UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 274 9e-72 UniRef50_A9BUE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 274 1e-71 UniRef50_Q2RRN9 Sensor protein n=3 Tax=Proteobacteria RepID=Q2RR... 274 1e-71 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 274 1e-71 UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobac... 274 1e-71 UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermane... 274 1e-71 UniRef50_Q9I310 Uncharacterized signaling protein PA1727 n=74 Ta... 273 1e-71 UniRef50_C1I4R6 Diguanylate cyclase/phosphodiesterase domain 2 n... 273 1e-71 UniRef50_C6AS31 Diguanylate cyclase/phosphodiesterase with PAS/P... 273 1e-71 UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/P... 273 2e-71 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 273 2e-71 UniRef50_Q0BFB8 Response regulator receiver modulated diguanylat... 273 2e-71 UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 273 2e-71 UniRef50_B1XXA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 273 2e-71 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 273 2e-71 UniRef50_A1WTF5 Diguanylate cyclase/phosphodiesterase with PAS/P... 273 3e-71 UniRef50_A0KIX5 PAS:GGDEF domain protein n=1 Tax=Aeromonas hydro... 273 3e-71 UniRef50_Q3A254 Periplasmic sensor diguanylate cyclase/phosphodi... 273 3e-71 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 272 3e-71 UniRef50_A1TMD5 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 272 4e-71 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 272 4e-71 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 272 5e-71 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 272 5e-71 UniRef50_Q60A84 Sensory box protein n=1 Tax=Methylococcus capsul... 272 5e-71 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 271 5e-71 UniRef50_A0KIJ4 MorA n=2 Tax=Aeromonas RepID=A0KIJ4_AERHH 271 5e-71 UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsul... 271 5e-71 UniRef50_Q47C60 Diguanylate cyclase/phosphodiesterase with PAS/P... 271 5e-71 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 271 6e-71 UniRef50_A8GYS2 Diguanylate cyclase/phosphodiesterase with PAS/P... 271 6e-71 UniRef50_B1J9N2 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ps... 271 6e-71 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 271 6e-71 UniRef50_A6FEH9 Sensory box protein n=1 Tax=Moritella sp. PE36 R... 271 6e-71 UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuni... 271 6e-71 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 271 7e-71 UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 271 7e-71 UniRef50_Q2S7Q5 Predicted signal transduction protein containing... 271 8e-71 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 271 8e-71 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 271 8e-71 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 271 9e-71 UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 271 9e-71 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 271 9e-71 UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/P... 270 1e-70 UniRef50_Q2BQB2 Sensory box protein n=1 Tax=Neptuniibacter caesa... 270 1e-70 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 270 1e-70 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 270 1e-70 UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/P... 270 1e-70 UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/P... 270 1e-70 UniRef50_A3JAE8 Predicted signal transduction protein containing... 270 1e-70 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 270 1e-70 UniRef50_B3E5T4 Response regulator receiver modulated diguanylat... 270 1e-70 UniRef50_C1D398 Putative diguanylate cyclase with PAS/PAC and GA... 270 1e-70 UniRef50_Q2BMC4 Hybrid signal transduction histidine kinase and ... 270 2e-70 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 270 2e-70 UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 270 2e-70 UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/P... 270 2e-70 UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 269 2e-70 UniRef50_A0YBW6 Predicted signal transduction protein containing... 269 3e-70 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 269 3e-70 UniRef50_C1DCZ4 Predicted signal transduction protein containing... 269 3e-70 UniRef50_C1D1W4 Putative diguanylate-cyclase n=1 Tax=Deinococcus... 269 3e-70 UniRef50_Q1JW15 Diguanylate cyclase/phosphodiesterase with PAS/P... 269 3e-70 UniRef50_A4JTT5 Diguanylate cyclase/phosphodiesterase with PAS/P... 268 4e-70 UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/P... 268 4e-70 UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfuro... 268 5e-70 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 268 5e-70 UniRef50_C5V2W0 Response regulator receiver modulated diguanylat... 268 5e-70 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 268 6e-70 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 268 7e-70 UniRef50_A1SU67 Diguanylate cyclase/phosphodiesterase with PAS/P... 268 7e-70 UniRef50_Q0G5H0 GGDEF family protein n=1 Tax=Fulvimarina pelagi ... 268 8e-70 UniRef50_C5V0J9 Diguanylate cyclase/phosphodiesterase with PAS/P... 268 9e-70 UniRef50_Q2BRK3 Putative uncharacterized protein n=1 Tax=Neptuni... 267 1e-69 UniRef50_A6QAR7 Signal transduction protein n=1 Tax=Sulfurovum s... 267 1e-69 UniRef50_Q15QH2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 267 1e-69 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 267 1e-69 UniRef50_A1TM92 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 267 1e-69 UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/P... 267 1e-69 UniRef50_B1Y5R0 Response regulator receiver modulated diguanylat... 267 1e-69 UniRef50_Q47ZI3 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax... 267 2e-69 UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extra... 267 2e-69 UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (... 266 2e-69 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 266 2e-69 UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 266 2e-69 UniRef50_Q1JW23 Diguanylate cyclase/phosphodiesterase with PAS/P... 266 2e-69 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 266 2e-69 UniRef50_Q47V32 Sensory box/GGDEF family protein n=1 Tax=Colwell... 266 2e-69 UniRef50_Q2SDG6 Predicted signal transduction protein containing... 266 2e-69 UniRef50_C1DD31 Predicted signal transduction protein containing... 266 3e-69 UniRef50_C5SBP4 Diguanylate cyclase/phosphodiesterase with PAS/P... 266 3e-69 UniRef50_Q1AVS2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ru... 266 3e-69 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 266 3e-69 UniRef50_C9YCS0 Uncharacterized signaling protein PA1727 n=1 Tax... 265 4e-69 UniRef50_UPI0001926D08 PREDICTED: hypothetical protein n=1 Tax=H... 265 5e-69 UniRef50_UPI0001C313CD diguanylate cyclase/phosphodiesterase wit... 265 5e-69 UniRef50_A9BVR1 Diguanylate cyclase/phosphodiesterase with PAS/P... 265 5e-69 UniRef50_A4ACX6 Sensory box/GGDEF/EAL family protein n=1 Tax=Con... 265 6e-69 UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 265 6e-69 UniRef50_A1VBK7 Diguanylate cyclase/phosphodiesterase with PAS/P... 265 6e-69 UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/P... 265 6e-69 UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS... 265 6e-69 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 265 7e-69 UniRef50_C7R6X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 265 8e-69 UniRef50_Q3IEZ9 Putative uncharacterized protein n=2 Tax=Pseudoa... 264 8e-69 UniRef50_Q21DZ3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 264 8e-69 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 264 9e-69 UniRef50_D2M2P9 Diguanylate cyclase/phosphodiesterase with PAS/P... 264 9e-69 UniRef50_Q55434 Phytochrome-like protein cph2 n=1 Tax=Synechocys... 264 9e-69 UniRef50_Q7MI32 C-di-GMP phosphodiesterase A-related protein n=4... 264 9e-69 UniRef50_A6QA23 Putative uncharacterized protein n=1 Tax=Sulfuro... 264 1e-68 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 264 1e-68 UniRef50_Q2W7U0 Predicted signal transduction protein containing... 264 1e-68 UniRef50_Q0HUI5 Diguanylate cyclase/phosphodiesterase with PAS/P... 264 1e-68 UniRef50_B0CC56 Diguanylate cyclase/phosphodiesterase with GAF d... 264 1e-68 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 264 1e-68 UniRef50_A6Q5V4 Putative uncharacterized protein n=1 Tax=Nitrati... 264 1e-68 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 263 1e-68 UniRef50_B6BGL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 263 1e-68 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 263 1e-68 UniRef50_Q89WT2 Bll0596 protein n=1 Tax=Bradyrhizobium japonicum... 263 2e-68 UniRef50_B1M8T6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 263 2e-68 UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 263 2e-68 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 263 2e-68 UniRef50_A4WAU1 Diguanylate cyclase/phosphodiesterase n=2 Tax=En... 263 2e-68 UniRef50_Q3A1F4 Response regulator receiver modulated diguanylat... 263 2e-68 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 263 2e-68 UniRef50_Q1K2C5 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 263 2e-68 UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 263 2e-68 UniRef50_B7KI79 Response regulator receiver modulated diguanylat... 263 2e-68 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 263 2e-68 UniRef50_Q21WB0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 263 2e-68 UniRef50_C5SCB7 Diguanylate cyclase/phosphodiesterase with PAS/P... 263 3e-68 UniRef50_Q47HF3 Response regulator receiver modulated diguanylat... 263 3e-68 UniRef50_C6C4P4 Diguanylate cyclase/phosphodiesterase with MHYT ... 263 3e-68 UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 263 3e-68 UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Co... 263 3e-68 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 263 3e-68 UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 263 3e-68 UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Maripro... 263 3e-68 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 262 3e-68 UniRef50_Q21XK7 Response regulator receiver modulated diguanylat... 262 3e-68 UniRef50_A8H0J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 262 3e-68 >UniRef50_P76129 Heme-regulated cyclic di-GMP, cyclic AMP phosphodiesterase, n=48 Tax=Enterobacteriaceae RepID=DOS_ECOLI Length = 799 Score = 1653 bits (4281), Expect = 0.0, Method: Compositional matrix adjust. Identities = 799/799 (100%), Positives = 799/799 (100%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML Sbjct: 1 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA 120 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA Sbjct: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA 120 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ Sbjct: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN Sbjct: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 Query: 241 LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGM 300 LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGM Sbjct: 241 LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGM 300 Query: 301 PIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAA 360 PIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAA Sbjct: 301 PIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAA 360 Query: 361 LALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVDHIQDVIDS 420 LALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVDHIQDVIDS Sbjct: 361 LALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVDHIQDVIDS 420 Query: 421 LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSK 480 LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSK Sbjct: 421 LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSK 480 Query: 481 PIMIDDKPFPLTLSIGISYDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKE 540 PIMIDDKPFPLTLSIGISYDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKE Sbjct: 481 PIMIDDKPFPLTLSIGISYDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKE 540 Query: 541 RLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEE 600 RLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEE Sbjct: 541 RLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEE 600 Query: 601 IGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGID 660 IGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGID Sbjct: 601 IGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGID 660 Query: 661 GHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKID 720 GHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKID Sbjct: 661 GHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKID 720 Query: 721 KSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSR 780 KSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSR Sbjct: 721 KSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSR 780 Query: 781 PLPAEEIPGWMSSVLPLKI 799 PLPAEEIPGWMSSVLPLKI Sbjct: 781 PLPAEEIPGWMSSVLPLKI 799 >UniRef50_C1DIM2 Cyclic di-GMP signal transduction protein n=5 Tax=Proteobacteria RepID=C1DIM2_AZOVD Length = 1196 Score = 593 bits (1530), Expect = e-168, Method: Compositional matrix adjust. Identities = 323/830 (38%), Positives = 484/830 (58%), Gaps = 61/830 (7%) Query: 17 ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHN 76 AL+++ + A LI+E + V+FF+ AAE+LWG R+EV+G + +++ L R + Sbjct: 22 ALDRSALVAALIDERNRVVFFSQAAERLWGLGRDEVLGRDAGLVLSPGLSS------RGD 75 Query: 77 REGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL--ALVRDASVEMAQKEQ 134 A + G + L ++ +DG +I F+ S + +G++++L AL + + Sbjct: 76 TPSSGADLPGSGQTLAVKCRDGRQIGVFFSRSAIEIDGRLFHLLVALSPEGMPDGVMGRA 135 Query: 135 TRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADN 194 RQL++A+DH D+P++V + +R IV NRAFTE FGY + E G++P + P A++ Sbjct: 136 NRQLLMAIDHTDQPMLVFNAQRQIVHVNRAFTESFGYELGEVLGLEPMAVFPSPNVSAED 195 Query: 195 RIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV-YDVLAHLQNL-VMTFSDITEER 252 R + L W R Q E L+ + G W++ S SP D + L V +DITEER Sbjct: 196 LARHRSLPWGRERFQTEMLVRRKNGSDFWVRISSSPFDGDEVDELNGYSVDVLADITEER 255 Query: 253 QIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAE 312 QIR LE +L A+ SS F E+G +CR IE++ S++ + G WA+ E Sbjct: 256 QIRSLEHEVLEALTSSLSFEEVGNCLCRCIEAIAPGVIASVWRIAEGRIRPWAAPQFPPE 315 Query: 313 IQNA-----------------------------------------------QSWSATIRQ 325 A WS +++ Sbjct: 316 CSAAWDGVEIGEGVASCGTTAYRGEPVMVRDIASDALWASYKHLILPYGLRACWSYPVKR 375 Query: 326 RDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLP 385 RDG+ AG G + +ER+A+ S H+ ALA+E+E+ RQ + +L+Q D +TGLP Sbjct: 376 RDGSVAGTFAFYFREGGGPDSHLERIAEASVHLCALAIEREEDRQQMNRLVQLDTLTGLP 435 Query: 386 NRNNLHNYLDDLVDKAV--SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKP 443 NR++L +D+L+ A + +G+D +D+ ++LG+A DQ L+ + NR + L+P Sbjct: 436 NRSHLLRRIDELLVSATWGDIACFNLGLDRFKDINEALGHAEGDQVLVAMANRLQRHLRP 495 Query: 444 DQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DL 501 Q+L R EG FV+V+ + DV + + +A+ L V++ I + L+ S+GIS + Sbjct: 496 GQFLSRSEGDLFVVVAPDCDVRSASLMAERLLQTVAEQIEVGGHALNLSASVGISLYPEG 555 Query: 502 GKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVY 561 G++RD LL+ A +AM +++ GG G+QFF P MN +++RL+L AALK AI+ + L L Y Sbjct: 556 GQDRDALLANAKSAMYRVKRTGGGGYQFFIPEMNRALQDRLLLSAALKRAIAGDGLSLHY 615 Query: 562 QPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAE 621 QPQ+ +GELYG EALARWHD G +PP++FI LAEE G+IE IGRW + EACRQLAE Sbjct: 616 QPQVHTVSGELYGFEALARWHDDEFGDIPPTKFIGLAEETGQIEAIGRWALREACRQLAE 675 Query: 622 WRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIF 681 WR +P +SVNLS ++F S LP V+ + + + G LT+EITES MM E+ Sbjct: 676 WREGGAMVPTVSVNLSPINFHSRDLPEFVAGLLREFALPGASLTIEITESTMMALTPEML 735 Query: 682 KRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAIT 741 + +R +GVGLSVDDFGTGFS LS L++LPVTE+KID+SF+D+CL E R+ +L+ A+ Sbjct: 736 DIVHGIRSLGVGLSVDDFGTGFSSLSNLINLPVTEVKIDRSFIDKCLEENRLQSLVAAVV 795 Query: 742 SIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 IG SL+LTVVAEGVET+EQ ++L + C V+QGY FSRP+ E W+ Sbjct: 796 GIGHSLDLTVVAEGVETREQRDLLGEYRCPVLQGYIFSRPMSPCEAIKWL 845 >UniRef50_C6C676 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Dickeya dadantii Ech703 RepID=C6C676_DICDC Length = 861 Score = 578 bits (1489), Expect = e-163, Method: Compositional matrix adjust. Identities = 315/840 (37%), Positives = 498/840 (59%), Gaps = 71/840 (8%) Query: 13 IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEY 72 + ALEQ+++ VLIN+ V+ FN AAE LWGY+R+E+ G + L+ RPA+ + Sbjct: 12 VLLSALEQSIVAVVLINDAGCVLLFNRAAEILWGYERQEMRGRPVVSLLAPVCRPAYLDA 71 Query: 73 IRHNRE----GGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVE 128 IR N+ G K + E + LE+KDG + W R LSKV G+ Y + + D S++ Sbjct: 72 IRSNQADSTAGAKTKCEWL-----LERKDGGQFWGRLPLSKVEVNGRTYRMLMAWDVSLD 126 Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 + + Q R ++A+D+ +RPV++LD +++ N +F+ ++GY + + G D +++ Sbjct: 127 VEARWQNRLTMLAIDNAERPVVLLDNACRVIRVNYSFSRLYGYALEDIVGNTLDGIMSYS 186 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYD-----VLAHLQNLVM 243 D+ + ++W +R Q E + R G + + + + SP+ D + N++ Sbjct: 187 LDSQDSAGKKMSVMWGRSRVQAEVAIRCRDGREAFGRMASSPLIDDENDEFYGYSINVI- 245 Query: 244 TFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFAL-RNGMPI 302 SDITEE+Q R LE +IL A+ SS F E+G+ IC+ + ++ + S+ + G+ Sbjct: 246 --SDITEEQQFRSLERDILGALVSSLSFAELGDYICQQVSEIVPDVIPSIMTVDHRGILR 303 Query: 303 HWAS--------------------SSHG-----------AEIQNAQSW------------ 319 HW++ S G A+I++ SW Sbjct: 304 HWSAPQLPDAYNQQVSGMAIGDGVGSCGTAAWRGEPVVAADIEHDASWAMFSQIPLAYGL 363 Query: 320 ----SATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQL 375 S IR+RD + AG + + + + F ER+ D H+ +LA+EQE++RQ + QL Sbjct: 364 RACWSYPIRRRDRSVAGTVAFYSRELRQPTLFHERIIDACTHLCSLAIEQEENRQRMVQL 423 Query: 376 IQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYL--IGVDHIQDVIDSLGYAWADQALLEV 433 +Q+DP+TGLPN+ +L YLDD++ + + V L +G+D +D+ ++ G+A D+ L+ V Sbjct: 424 VQYDPLTGLPNQYHLQRYLDDILSQQPTREVTLFSVGLDRFKDINEAFGHAAGDRVLVAV 483 Query: 434 VNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTL 493 +R + L+ ++L R EG +FV+V+ + + + ++LR +S+P+ +D L+ Sbjct: 484 THRLQAFLRAGEWLSRPEGDRFVIVAPDCSAHRASLMTEQLRETISQPVELDGHRLSLSA 543 Query: 494 SIGISYDL--GKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEA 551 S+GIS+ L G NR+ LL A AM Y K G G+QFFS MN ERL+LG ALK A Sbjct: 544 SVGISHYLEGGSNRETLLDNAKVAM-YRAKEAGGGYQFFSADMNVAASERLLLGGALKRA 602 Query: 552 ISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWV 611 I+N +L+L YQPQI ++GELYG+EALARW+DP+ G+VP S+FI LAE+IGEIE + W Sbjct: 603 INNGELELYYQPQIRLDSGELYGMEALARWYDPVFGNVPTSKFIALAEDIGEIEALSYWA 662 Query: 612 IAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITES 671 + EACRQL+ W +P +SVN S L F + LP ++ + ++ + G +LT+EITES Sbjct: 663 LCEACRQLSLWDLAGARVPVVSVNFSPLCFHRD-LPETITTILQSFSLTGERLTIEITES 721 Query: 672 MMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEK 731 M ++ + +R G+G+S+DDFGTGFS LS LV+LPVTE+KID+SF+D+C +E+ Sbjct: 722 AAMALTPDMLAVVHRIRGNGIGVSIDDFGTGFSNLSNLVNLPVTEVKIDRSFIDKCESEE 781 Query: 732 RILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 R+ AL+EA+ IG+SL L VVAEGVET+ Q ++ K+ R+ QGY F+RP+ A ++PGW+ Sbjct: 782 RLQALVEAVVGIGRSLKLEVVAEGVETEGQSALIGKLGGRIAQGYLFARPMKASDVPGWL 841 >UniRef50_C8KHS7 Putative phosphodiesterase/diguanylate cyclase n=1 Tax=Gluconacetobacter intermedius RepID=C8KHS7_9PROT Length = 865 Score = 552 bits (1422), Expect = e-155, Method: Compositional matrix adjust. Identities = 312/838 (37%), Positives = 481/838 (57%), Gaps = 61/838 (7%) Query: 15 FPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIR 74 PALEQ ++G VLI+EN+ V FFN AAE+LW R++VIG N+++L+PR++R H + IR Sbjct: 14 LPALEQTILGVVLIDENNTVTFFNRAAERLWHCARQDVIGRNVNVLVPRNIRSTHDDLIR 73 Query: 75 HNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQ 134 HNRE G ++ G SRE+ +E+ DG+ W +LS+++ +GK+ Y+AL+RD S E+ +E+ Sbjct: 74 HNRETGINKIVGTSREVLVERLDGTSFWANLSLSRIAVDGKIGYMALIRDISQEVDDREK 133 Query: 135 TRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADN 194 R L + V DR V +LDPE I+ NRAF++MFG+ +G +L Sbjct: 134 IRLLSLVVRETDRGVAILDPEFRIIYVNRAFSDMFGFGPERVTGHGLSVILA----GDTT 189 Query: 195 RIRLQQLLWKTARDQDEFLLLTR----TGEKIWIKASISPVYDVLAHLQNLVMTFSDITE 250 I + L + AR+ F L R +G IW+ A+++PV+ ++N+V+ +DITE Sbjct: 190 DIGILNKLHEGARNARGFTLEIRARHASGRDIWVSAAMNPVFSESGEVENIVVVLTDITE 249 Query: 251 ERQIRQLEGNILAAMCSSPPFHEMGEIICRNIES-----------VLNESHV-------- 291 + + L+ + L A+ S HE+ + ICR IE V + H+ Sbjct: 250 QHFLDSLQRDTLEAISSDLSLHEVMDFICRRIEHYIPDVMPAIYLVEKDEHLKCKGRASL 309 Query: 292 --SLFALRNGMPIHWASSSHG-----------AEIQNAQSW----------------SAT 322 SL L + +PI ++ G +I + W + Sbjct: 310 PLSLVKLYDTLPIGDGAACSGIAAATGNVTECPDIAHDPRWQHLREQTLHNGIKAARATP 369 Query: 323 IRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMT 382 I R+ AG+ + + A A ++ S H+ LA+E+ ++++HI +L FD +T Sbjct: 370 IILRNNRIAGVFTCYSRTDALPDAACQKAVATSLHLCTLAIERHEAKEHINRLSDFDLLT 429 Query: 383 GLPNRNNLHNYLDDLVDKAVSPVVYL--IGVDHIQDVIDSLGYAWADQALLEVVNRFREK 440 LPNR L + ++ + V + L +GVD+ + + D G+ D+ + + + RE Sbjct: 430 SLPNRRWLRQNMARMLRRHVRGNLMLLTVGVDNFKHINDVFGHTAGDELIAYIAGQLREV 489 Query: 441 LKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY- 499 L D L R G QF +V+ + + + ++ + V+S P I P L+ S+G++ Sbjct: 490 LTIDDTLVRSGGDQFTIVT-NGEQQHASSLSATILRVLSTPTHIGAVPVSLSASLGVAVH 548 Query: 500 -DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLK 558 + G++ D LL A AM + NGG FFSP MN+ +RL+L AAL++AI++++L+ Sbjct: 549 PENGEDGDTLLKNAETAMFQAKANGGGHCCFFSPRMNQQASDRLILAAALRDAITHDRLR 608 Query: 559 LVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQ 618 L YQPQ+ A +G+LYG+EAL+RW DP G V P+RFI +AEE G+IE IG+W + AC Q Sbjct: 609 LFYQPQVHARSGQLYGVEALSRWIDPSLGFVSPARFITVAEETGQIEAIGKWSLRAACMQ 668 Query: 619 LAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDT 678 +A+W + +P +SVNLS LHFR LP V ++ GI +LT+EITES M+++ Sbjct: 669 MAQWVGDGVDVPVVSVNLSPLHFRDETLPEFVDKLLNETGIPPQRLTIEITESTMIDNYE 728 Query: 679 EIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLE 738 + Q LR+MGVG+S+DDFGTGFS LS L LPV E+KID+SF+ + +++ A++ Sbjct: 729 RTIRVAQKLREMGVGMSMDDFGTGFSSLSNLAGLPVNEVKIDRSFMTGLESIEKVRAVVM 788 Query: 739 AITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLP 796 A+ IGQSL +TVVAEGVE +EQ +L + C V+QGY FS+PLPAEE+ W S+ P Sbjct: 789 AVVRIGQSLGMTVVAEGVEHEEQRRLLADMDCDVLQGYMFSKPLPAEELAAWFSAYQP 846 >UniRef50_A7IPE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IPE4_XANP2 Length = 864 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 272/843 (32%), Positives = 421/843 (49%), Gaps = 80/843 (9%) Query: 26 VLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR--PAHPEYIRHNREGGKAR 83 V ++E + F N AAE LWG ++G N ++ P LR PA +R E Sbjct: 21 VFLDETGVITFVNAAAEHLWGLSAAAMVGRNARVVFPAALRFDPA----LRWTMED---- 72 Query: 84 VEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVD 143 + G ++ + + DGS + L++V GK Y A+V + L + + Sbjct: 73 MVGADWQVVITRPDGSSAFALVRLAQVWHAGKAGYAAVVHAMPDPTGAAKHISILSLVAE 132 Query: 144 HLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLW 203 DR V+V D IV NRAF EM GY EA G + LL + D R+ + Sbjct: 133 KTDRGVVVTDARHRIVYTNRAFQEMLGYVEGEAEGRVLEDLLATGKGATDLAARISSGIQ 192 Query: 204 KTARDQDEFLLLTRTGEKIWIKASISPVYD-VLAHLQNLVMTFSDITEERQIRQLEGNIL 262 + ++ L +G ++W+ A ++PV + V L+++V +DIT R + L+ +L Sbjct: 193 RRMPFPEDVPLRGASGNEVWVSAIVTPVLNQVTGALEHVVAVLADITHARLMEDLQRQVL 252 Query: 263 AAMCSSPPFHEMGEIICRNIE-----------SVLNESHVSLFALRN----------GMP 301 AA+ + P ++ E++CR +E V + +++ A N G+ Sbjct: 253 AALAADAPARDILELLCRKVEELAPGVLCSIMGVTADDRLTVLAAPNLPAAFSAAVEGLA 312 Query: 302 IHWASSSHGAEIQNAQS---------------------------WSATIRQRDGAPAGIL 334 I S G ++ WS R R G A Sbjct: 313 IGPKCGSCGTSAFRGEAVMVEDITTSPLWEDFKDLVLPHGIKGCWSIPARLRGGKVAATF 372 Query: 335 QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYL 394 + ++E V + AL LE+ ++R I L D +TGLPNR L L Sbjct: 373 AFYFPGPPFAAPWLESVVSACADLCALVLERSEARDRIATLASIDALTGLPNRRRLIESL 432 Query: 395 DDLVDKAVS---PV-VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRI 450 DL+ +A P+ V ++ VDH +DV ++LG++ D+ L+E+ R + +L+ + R Sbjct: 433 GDLIAEAAERDEPLAVMMLDVDHFKDVNETLGHSTGDELLVEMARRLQAQLRTGDTVGRT 492 Query: 451 EGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYL 508 G +FV+V + +IA L + +S PI ++ S+GI+ G + + L Sbjct: 493 GGDEFVVVVHDCAAEEAARIARRLIDYLSAPIPAQKLHLTMSASVGIALYPQHGTSAETL 552 Query: 509 LSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAE 568 L A AM + +QFF+ +N+ V++RLVL AL+EA+ N L+LVYQPQ+ Sbjct: 553 LRHADTAMYEAKSKARGRFQFFTEDLNKRVEDRLVLSVALREAVQNQALRLVYQPQVTLA 612 Query: 569 T---------------GELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIA 613 G L+G+EALARW DP+HG VP RFI LAEE G IE+I +W + Sbjct: 613 KVTLSNDTPSNGTLAGGALHGVEALARWSDPVHGEVPAPRFIALAEEYGFIESIDQWAVE 672 Query: 614 EACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMM 673 EACRQ+A WR++ + +P +SVNLS L FRS ++ ++DA+ + L VEITE + Sbjct: 673 EACRQIAVWRAEGVAVPHVSVNLSPLSFRSGEIVGIIADALERHRLAPSDLRVEITERVT 732 Query: 674 MEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRI 733 M+ + F + + +GV +++DDFGTG+S LS L LP+ E+KID+SF+ +K Sbjct: 733 MDQNPHSFATARAIDALGVRIAMDDFGTGYSSLSALSRLPIAELKIDRSFMLSIEQDKNA 792 Query: 734 LALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 LAL A+ IGQSL + VVAEGVET Q ++LR + C +QGY F+RPL A+ + GW+++ Sbjct: 793 LALATAVILIGQSLGMAVVAEGVETAAQADLLRTLGCHAVQGYLFARPLEADAVAGWLAA 852 Query: 794 VLP 796 P Sbjct: 853 NAP 855 >UniRef50_B5ZGV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZGV8_GLUDA Length = 877 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 272/868 (31%), Positives = 428/868 (49%), Gaps = 109/868 (12%) Query: 13 IFFPALEQNMMGAVLINEND-EVMFFNPAAEKLWGYKREEVIGNNIDMLIP-RDLRPAHP 70 + + M G V++ + D ++F N AA +L G + EE ++ +L+P D+ P Sbjct: 10 VVLAGVLDAMPGGVVVTDADGRILFINRAAARLCGGQPEEWASRSLAVLLPDMDMTP--- 66 Query: 71 EYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV-----------YYL 119 +G RE++L +DG+ +W L++ A V + Sbjct: 67 --------------DGTPREVRLAGRDGAALWLEVTLNRGGALPGVGLEVPEETPREIRV 112 Query: 120 ALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 A +RD + E+A++ V+H R V+VLD IV N AFT + Y + G Sbjct: 113 AALRDVTDEVARRTAAHLFSTIVNHAGRGVMVLDDRDRIVYVNPAFTRLLDYRPEDVVGR 172 Query: 180 QPDTLLNIPEFPADNRIRLQQL---LWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 +L+ P+ D+R L + L + +R+G+ IW+ + SPV D Sbjct: 173 DVSVILS-PDV--DDRAALGEFRRDLHGRRTFGRDLHARSRSGQDIWMSTATSPVRDGGV 229 Query: 237 HLQNLVMTFSDITEERQIRQLEGNILAAMCS-----SPPFHEMGEIICRNIESVLNESHV 291 ++ SD T +++ L ++ +A+ + F ++ +IC IE++ Sbjct: 230 LDGGAIVILSDETPATELQHLRLDVTSALAGVTGSRAMDFDDVMTLICARIEAIAPGVMA 289 Query: 292 SLFALR---------------------NGMPIHWASSSHGAEIQNAQ------------- 317 S+ L +G P+ + + GA I + Q Sbjct: 290 SIILLSGDGTAWMAGRAAMPDAIAAACDGFPVGPMAGTCGAAISSGQEVLTSDIETDPNW 349 Query: 318 ---------------SWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALA 362 WS IR R G AG L + + E S + RV D + LA Sbjct: 350 TPAMRDLMRPLGVVACWSVPIRLRGGTVAGSLALYFQTLREPSPWHRRVVDACIQLCTLA 409 Query: 363 LEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVD--HIQDVIDS 420 +EQE++R I L +D +TGLPNR L +L A + L+ VD +++ D+ Sbjct: 410 VEQERARAQIAHLAHYDAVTGLPNRTWLREHLAARQGAANWCGLTLMSVDVNRYREIRDA 469 Query: 421 LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLEND--------------VS 465 LG A AD+ L + R R + D L R +F +L +D V Sbjct: 470 LGGAAADEVLGGIAKRLRAVVGQDDILVRTGEDEFSILTDCGHDGTEPECRDRSGMMAVD 529 Query: 466 NITQIADELRNVVSKPIMIDDKPFPLTLSIGI--SYDLGKNRDYLLSTAHNAMDYIRKNG 523 + +A + ++ P++++ P +SIGI D G+ + LL A+ R+ G Sbjct: 530 RASTLAGAILRALASPVVVNGMPIGSPISIGICAGRDKGRTVETLLRHTQIAVSRAREAG 589 Query: 524 GNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHD 583 G+ ++FFSP MN ++R++L +AL +A+++ +L+LVYQPQ+ + +G LYG+EALARWHD Sbjct: 590 GSLYRFFSPEMNRWAQDRVMLASALGDALADGRLRLVYQPQVRSRSGALYGVEALARWHD 649 Query: 584 PLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRS 643 P G +PP+RFIP+AEE G IE +G W + +ACRQ+A W + + IP +SVNLSA HF Sbjct: 650 PEWGDIPPTRFIPMAEEAGLIEALGEWALRQACRQMAIWMAHGVGIPVVSVNLSARHFSD 709 Query: 644 NQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGF 703 LP + + GI +L VEITES M+ + +R +GVGLS+DDFGTGF Sbjct: 710 PGLPGLIGSILEESGIPPGRLMVEITESTMITDSETTIAAARAIRALGVGLSMDDFGTGF 769 Query: 704 SGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFE 763 S L+ LVSLP++E+KID++FV +++ A+ IGQSL +TVVAEGVET+ Q + Sbjct: 770 SSLANLVSLPLSEVKIDRAFVVGLERAGDTYSIVNAVLRIGQSLGVTVVAEGVETQRQLD 829 Query: 764 MLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 +L + C V+QG+ SRPL A ++P W+ Sbjct: 830 LLDGLDCPVVQGFLMSRPLDAGKVPSWL 857 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 11/121 (9%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A A +F + G +++++ D +++ NPA +L Y+ E+V+G ++ +++ D+ Sbjct: 123 ARRTAAHLFSTIVNHAGRGVMVLDDRDRIVYVNPAFTRLLDYRPEDVVGRDVSVILSPDV 182 Query: 66 --RPAHPEYIR--HNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLAL 121 R A E+ R H R R+L + G IW A S V G + A+ Sbjct: 183 DDRAALGEFRRDLHGR-------RTFGRDLHARSRSGQDIWMSTATSPVRDGGVLDGGAI 235 Query: 122 V 122 V Sbjct: 236 V 236 >UniRef50_A5ETK5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bradyrhizobiaceae RepID=A5ETK5_BRASB Length = 892 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 254/828 (30%), Positives = 417/828 (50%), Gaps = 67/828 (8%) Query: 26 VLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML-IPRDLRPA-------HPEYIRHNR 77 + ++ V N AA L +++IG ++D L +P + A P H Sbjct: 27 LFLDAEGRVHHANQAAVALLRRDLKDLIGADLDRLGLPAEQLRAMTKSEAEAPADAPHAA 86 Query: 78 EGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKVYYLALVRDASVEMAQKEQTR 136 E G A RE+ L DGS+ R + + S ++ L L+RD + ++ +E+ Sbjct: 87 EAGDA-----GREMMLRHADGSRCRVRAIVRDLPSDHAPMHSLLLLRDVTSDVEMRERNA 141 Query: 137 QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRI 196 L D +R VIV D E I+ N AF +FGY +E G Q +TLL P Sbjct: 142 LLTSVADRSNRAVIVTDHELKILYTNAAFCSIFGYSSAEVLGRQVETLLVGPCTDPATVE 201 Query: 197 RLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQ 256 RL+Q + +D+ ++ + G +IW A + + ++ LV SDI E +Q+R Sbjct: 202 RLKQCVEDDRGVEDDLMIYDKAGCEIWTTAHVKAHRNQRGKVKYLVGLLSDIRETKQLRS 261 Query: 257 LEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNG----------MPIHWAS 306 L+ I++++ S + + +CR +E + + S+ + +G +P ++S Sbjct: 262 LQQLIMSSLASDIAIATIADQLCRRVEELAPDVVCSILHVDSGGRIHPLGGPSLPADYSS 321 Query: 307 SSHGAEIQN--------------------------------------AQSWSATIRQRDG 328 G I WS I+ +DG Sbjct: 322 GLDGVAIGPDVGSCGTAAYLCEPVLARDIDSDPRWQPYKAGPLGAGLRACWSTPIQGKDG 381 Query: 329 APAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRN 388 G S + E++ + ALA+E+++ R I Q+ D +TGLPNR Sbjct: 382 RVIGTFAFYFRECRGPSPWHEQIVAACVQLGALAIERQEVRSTISQVAYHDMLTGLPNRA 441 Query: 389 NLHNYLDDLVDKAVSP---VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQ 445 + + + + ++ + + D+ +DV D+LG+A D+ L+ NR R +++P Sbjct: 442 RIPSMIAEAINACPEGSHLAIAFLDADNFKDVNDTLGHAAGDEFLVAFANRLRAQIRPGD 501 Query: 446 YLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGK 503 L R+ G +FV+V D + A + ++ P+ I + P++ S+G+S D Sbjct: 502 MLGRLGGDEFVIVLQNRDALEASLAAARITAALAMPLTIGKRQVPMSASMGLSLYPDNAT 561 Query: 504 NRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQP 563 + + L+ A AM ++ G ++FFS ++++ +ERL+ AL+EAI++ L L YQP Sbjct: 562 DIETLIKQADGAMYKAKRAGRATYRFFSADIDKLAEERLMHSTALREAIASEALTLNYQP 621 Query: 564 QIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWR 623 QI G ++G+EALARWHDP+ G V PS+FIPLAEE G IE IG W I +AC+Q+A WR Sbjct: 622 QICTRNGAIHGVEALARWHDPVLGEVSPSKFIPLAEECGLIEQIGVWSIKQACQQMASWR 681 Query: 624 SQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKR 683 + IP +SVNLS ++F++ L V+ + A + L +EITE +++ + Sbjct: 682 RAGLDIPCISVNLSPINFQNVNLAAVVAQILAANDLPAKMLMLEITEGVILNERATVIAT 741 Query: 684 IQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSI 743 + LR+MGVGLS+DDFGTG+S LSRL LP+ E+KID+SF+ ++ A++ A+ + Sbjct: 742 MSELRNMGVGLSLDDFGTGYSSLSRLAQLPIHELKIDRSFMRDFENDQGTRAIVTAVVRV 801 Query: 744 GQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 GQSL++ VVAEGVET+ Q +L ++ C +QG+ F+RP+ A W+ Sbjct: 802 GQSLDVKVVAEGVETEPQRRLLAELGCDAMQGFLFARPMAAGAFSRWL 849 >UniRef50_Q13IZ7 Putative diguanylate cyclase(GGDEF)/ phosphodiesterase(EAL) with PAS/PAC and GAF sensors n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13IZ7_BURXL Length = 847 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 263/844 (31%), Positives = 405/844 (47%), Gaps = 73/844 (8%) Query: 12 GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPE 71 G L Q VL++E+ + FFNPAAE LWG V+G + ML+PR ++PA Sbjct: 8 GTLVQVLAQIPDAVVLVDEDGAIGFFNPAAEALWGLTAAAVLGADAGMLLPRGIQPAG-- 65 Query: 72 YIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQ 131 H + G V+G LQ+E+ DG + ++ G+ + A +RD + + Q Sbjct: 66 ---HGVQTGN--VDGPGLALQIERNDGVMRRGQMSIHGFEVAGRRFRAAFIRDITDQHRQ 120 Query: 132 KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFP 191 E+ +QL+ V+ D +IV + I N T M GY +E G++ L P Sbjct: 121 CEEWQQLLRVVNGSDNAIIVASLDGSISFINSGVTRMLGYAAAEVQGLR----LVEPFAG 176 Query: 192 ADNRIRLQQLLWKTARD--------QDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVM 243 + + + AR+ + + L+ T+ G +W+ I+ + D NL+ Sbjct: 177 VHTNMAAVERIQSAAREPSTPDHPFRQDLLVYTKGGRPLWVNVGITVITDNAGAPVNLLA 236 Query: 244 TFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNG---- 299 +DIT R +L+ +L AM P E+ I+CR +E + E + + +G Sbjct: 237 VLTDITLTRMREELQQKVLDAMARELPATEVAGILCREVERIAPEVVATFLRVDDGRLFT 296 Query: 300 -----MPIHWASSSHGAEIQN--------------------------------------A 316 +P+ + G I A Sbjct: 297 LAAPRLPVTVTRAMDGESIGPCAGSCGTAAWRGTPVVVTDIASDPLWTGYRDLVLPLGLA 356 Query: 317 QSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLI 376 WS ++ DG+ G AF + + D+ + AL LE+EK+R I QL Sbjct: 357 ACWSYPVKGADGSVLGTFAFYYRENHGPVAFHQSLVDMGLSLCALLLEREKARMRIHQLA 416 Query: 377 QFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLE 432 D +TGLPNRN L++ A + I +DH + V D+ G+A D+ L E Sbjct: 417 FHDTLTGLPNRNMFETQAQQLLNDARRTERELALVFIDLDHFKRVNDTRGHATGDEVLCE 476 Query: 433 VVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLT 492 RF+ L+ L R+ G +FV + V T I + L + P+++ P + Sbjct: 477 TGRRFKSVLRDGDLLGRLAGDEFVAILPHCGVHQATGIVERLLAATAPPVVVAGAPIHAS 536 Query: 493 LSIGIS-YDL-GKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKE 550 SIGI+ Y G++ LL A AM + + G + FF M+ ++E+ +L A L+ Sbjct: 537 ASIGIAMYPADGEHVPTLLRQADIAMYHAKARGRGHFCFFREEMSRNIQEQAMLEADLRV 596 Query: 551 AISNNQLKLVYQPQIFAETGE-LYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGR 609 A+ ++ L L YQPQ A G L G+EAL RW+ G VPP RF+ LAEE G I +G+ Sbjct: 597 ALKHDLLDLWYQPQFDAANGHVLSGVEALLRWNHATLGSVPPVRFVVLAEECGLIGELGK 656 Query: 610 WVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEIT 669 WV ACRQLA+WR++ + IP +S+NLSA FR + L +V+ + A G+ H LT+E+T Sbjct: 657 WVTQRACRQLADWRARGVEIPRVSINLSASDFRDSTLAERVARTLLAHGLQPHDLTLEMT 716 Query: 670 ESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLT 729 ES+M+ + + I L +G+ LS+DDFGTG+S L L LP+ E+K+D+SFV Sbjct: 717 ESVMLGDEPGVLSMIDELHRLGIQLSLDDFGTGYSSLGYLHRLPLDELKLDRSFVRDLDH 776 Query: 730 EKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPG 789 AL + IG+SLN+ VVAEGVET Q + L + C V+QGY +RP+ + Sbjct: 777 SDSARALTSTVLRIGESLNIKVVAEGVETDTQRQFLVEHGCPVLQGYLLARPMAPHLLEE 836 Query: 790 WMSS 793 W+ + Sbjct: 837 WLRA 840 >UniRef50_Q68YD5 PDEA1 n=5 Tax=Gluconacetobacter RepID=Q68YD5_ACEXY Length = 765 Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust. Identities = 231/715 (32%), Positives = 387/715 (54%), Gaps = 64/715 (8%) Query: 135 TRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI------P 188 T L+ A++ +++ E I+ N+A ++G ++ G D L+ Sbjct: 9 TEILLPALEQAIDATVIIGQENEIIFYNQAAESLWGIPRADVIGRNVDCLVPTRLRHEHD 68 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRT-GEKIWIKASISPVY-----DVLAHLQNLV 242 + NR + T+R+ + TR GE I + S+S V L + ++ Sbjct: 69 RYIDRNRETGHNRIVGTSREVE----FTRADGEYICGELSLSKVQIGTGDKRLTYYMGVM 124 Query: 243 MTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPI 302 ++ ++ R+I L+ ++L A+ S ++GE+ICR +E+ + S +L L + P Sbjct: 125 KNVTEESQRRKILILQNDVLQALASDMLIQDIGELICRKVEAFVPNSVAALLVLDDAQP- 183 Query: 303 HW---ASSSHGAEIQNA---------------------------------------QSWS 320 W +S+ I+NA ++ Sbjct: 184 -WRVICTSALPPRIRNALETTVPSPSDVEKLKANASYTGRLVWDNYQSMCRSLGLQSCYA 242 Query: 321 ATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDP 380 A + DG GI + + A+ +R+ ALALEQ ++ H+ QL ++D Sbjct: 243 APVMAGDGRVTGIFALYLREPNQLGAWPQRLVGACLPFCALALEQHATKTHMTQLARYDS 302 Query: 381 MTGLPNRNNLHNYLDDLVDKA--VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFR 438 +TGL NR LH ++D++ + + ++++ +D +D+ D+LG+ +ADQ L+E+ R R Sbjct: 303 LTGLLNRGALHRVMEDIIAQPGNRTLAIFMLDIDRFRDINDALGHVYADQFLVEIAGRIR 362 Query: 439 EKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGIS 498 K D L R G +FV+V + D I I +L + +P+ I ++ SIGIS Sbjct: 363 SIAKEDYVLSRSGGDEFVVVVPDCDGKQIEDIGRQLLETIGRPLQIGQNTLSISCSIGIS 422 Query: 499 Y--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQ 556 G + + LLS A AM +++G ++F + N++ ++RLVLG+AL+++++ Sbjct: 423 TFPANGPDSESLLSHADTAMRKAKEDGRGIFRFANLEKNQVAQDRLVLGSALRDSLAQGM 482 Query: 557 LKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEAC 616 L+L YQPQ+ T EL G+EAL+RWH P G++ PSRFI +AEE G+IE IGRW + EAC Sbjct: 483 LQLHYQPQVRTHTLELSGVEALSRWHHPHLGNIFPSRFIAVAEETGQIEAIGRWSLLEAC 542 Query: 617 RQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEH 676 RQ+ +W +H+P ++VNLSA+HFR+ LP ++ + + +LTVEITES+MM++ Sbjct: 543 RQIVKWDRDGVHVPTVAVNLSAVHFRNRALPEHIAALLKDHNLKPARLTVEITESVMMDN 602 Query: 677 DTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILAL 736 + + +Q +R++G GLS+DDFGTG+S LSRL LP+TEIKID+SF++ + A+ Sbjct: 603 SRDTEEVLQSIRNIGCGLSMDDFGTGYSSLSRLTRLPLTEIKIDRSFINDFEYDTNAQAV 662 Query: 737 LEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 A+ IG L +TVV EGVET++Q ++L K++C V+QGY F++PL +++ W+ Sbjct: 663 TMAVIGIGSRLGMTVVTEGVETEQQRDLLEKLNCDVMQGYLFAKPLAPQDLEAWV 717 Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 51/132 (38%), Positives = 81/132 (61%), Gaps = 8/132 (6%) Query: 13 IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEY 72 I PALEQ + V+I + +E++F+N AAE LWG R +VIG N+D L+P LR H Y Sbjct: 11 ILLPALEQAIDATVIIGQENEIIFYNQAAESLWGIPRADVIGRNVDCLVPTRLRHEHDRY 70 Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV---SAEGKV-YYLALVRDASVE 128 I NRE G R+ G SRE++ + DG I +LSKV + + ++ YY+ ++++ + Sbjct: 71 IDRNRETGHNRIVGTSREVEFTRADGEYICGELSLSKVQIGTGDKRLTYYMGVMKNVT-- 128 Query: 129 MAQKEQTRQLII 140 ++ Q R+++I Sbjct: 129 --EESQRRKILI 138 >UniRef50_A9BW89 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=7 Tax=cellular organisms RepID=A9BW89_DELAS Length = 947 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 284/860 (33%), Positives = 416/860 (48%), Gaps = 87/860 (10%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A A + L++ M A E +M N E + GY G L+ DL Sbjct: 84 AGTAGQQALWSTLDKAMALAEFTPEG-RLMRANANYEAILGYPTSGAEG-----LLHSDL 137 Query: 66 -RPAHPE---YIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKV-YYL 119 AH + Y R + G E +SR + ++DGS W + V +G + + L Sbjct: 138 CTQAHADPDAYGRWRQRWGAG--ETISRVGEHRRRDGSTCWLEATYAPVLDTQGALSHVL 195 Query: 120 ALVRDASVEMA----QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 + D + + ++E R+L + D D V++ D I N FT MFG+ E Sbjct: 196 CIATDITARVQADRRRQEHLRRLSLVADATDAAVVIADGNWTISYVNAGFTRMFGWSSEE 255 Query: 176 ASGMQPDTLL---NIPEFPADNRIRLQ--QLLWKTARDQDEFLLLTRTGEKIWIKASISP 230 G P LL PEF A R L + +++ E +L+ + GE+ W+ A +P Sbjct: 256 VVGRAPIALLVPHASPEFTAAYRAELDAGKPVYR------EEILVGKDGERYWVSAQANP 309 Query: 231 VYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESH 290 V L V +DITE + L+ L AM P E+ +++CR +E + + Sbjct: 310 VMGPDGRLHTTVTVITDITEAKMHEVLQRRALEAMARDQPLTEVLDLVCREVERIAPDIA 369 Query: 291 VSLF---------------------ALRNGMPIHWASSSHGAE----------------- 312 VS+ A +G+PI S GA Sbjct: 370 VSVLEVDDQSRLHPLAAPSLPASYSAALDGVPIGPNVGSCGAAAFHNRPVLVGDIATDPL 429 Query: 313 ----------IQNAQSWSATIRQRDGAPAGILQI--KTSSGAETSAFIERVADISQHMAA 360 + WS I G AG + F +R+ + + A Sbjct: 430 WADFKHLILPLGYTACWSTPICGLQGGVAGTFAFYYRHFDRPGPDPFHQRLVEACTDLCA 489 Query: 361 LALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQD 416 LALE+E++R+ I QL +D +T LPNR+ L + + A V I +D + Sbjct: 490 LALEREQARRRIRQLAFYDGLTTLPNRSLLLAQAEQALSVASHEGHELAVVFIDLDRFKQ 549 Query: 417 VIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRN 476 V DSLG+ D+ L V R + +L+ R+ G +FV+V + ++ + L++ Sbjct: 550 VNDSLGHPAGDRLLCSVAQRIQAELRTGDIAGRLSGDEFVIVLPHCGGAQAAEVIERLQS 609 Query: 477 VVSKPIMIDDKPFPLTLSIGISYDLGKNRDY--LLSTAHNAMDYIRKNGGNG-WQFFSPA 533 + +P MIDD T S GI+ RD LL A AM Y K+GG G + FFSP Sbjct: 610 ALGEPCMIDDVSLASTASCGIAVFPADGRDMETLLHRADMAM-YQAKSGGRGLYSFFSPE 668 Query: 534 MNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSR 593 MN + +ERLVL AL++A+ + L+L YQPQ+ + G LYG+EALARW G + P+R Sbjct: 669 MNRLAQERLVLETALRDALRSGGLRLHYQPQLDLKDGRLYGVEALARWSHAEFGEISPAR 728 Query: 594 FIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDA 653 FIPLAEE G I +G W + EACRQL EWRS+ I +PA+SVNLS F + LP ++D Sbjct: 729 FIPLAEECGLIGELGTWALREACRQLGEWRSRGIDVPAMSVNLSPTSFHNLDLPRMIADT 788 Query: 654 MHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLP 713 + + LT+EITES++++ + + +Q + GV LS+DDFGTG+S LS L LP Sbjct: 789 LEHNALKPQDLTLEITESLLLDTNPGTMRTLQAVHSQGVRLSMDDFGTGYSSLSYLRRLP 848 Query: 714 VTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVI 773 V+E+K+D+SFV ++ AL AI IG+SL+LTVVAEGVET Q +LR+ V Sbjct: 849 VSELKLDRSFVADLENDEAAQALSNAILGIGRSLHLTVVAEGVETAAQNTILREQGYPVA 908 Query: 774 QGYFFSRPLPAEEIPGWMSS 793 QGY FSRPLPA ++ W+ + Sbjct: 909 QGYLFSRPLPAADLERWLQA 928 >UniRef50_D2UAD2 Hypothetical c-di-gmp phosphodiesterase or signal transduction protein n=1 Tax=Xanthomonas albilineans RepID=D2UAD2_XANAL Length = 864 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 242/832 (29%), Positives = 411/832 (49%), Gaps = 64/832 (7%) Query: 17 ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHN 76 ++++ G V+I+ ++ FN AE LW + + +G I LI E IR + Sbjct: 35 SMQRTADGIVVIDAQSRIVAFNHIAETLWNLPQAQALGREIGELID--------EGIRAD 86 Query: 77 REGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTR 136 R +G L L+ + W + S V EG + VRD S E + + R Sbjct: 87 FLASCLR-DGNDYRLLLQSGKDVQRWISISASPVPQEGGPLQVLQVRDISAERERDTKMR 145 Query: 137 QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRI 196 L +A++ D +++ D + HI+ N F+ +FGY E G P +L P Sbjct: 146 LLSLALERSDSAIMLCDKDLHILYVNAGFSRVFGYDTKEILGKLPSGVLPGPGSDMQVVS 205 Query: 197 RLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQ 256 + ++ + Q + L+ + +WI +P+ + +Q+ +++F+DIT + Sbjct: 206 QTRERMRAGFGHQVDLLVYRKDSTPLWITMVANPITEEDGSVQHYMLSFTDITHSKMHEV 265 Query: 257 LEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNA 316 L N+L AM P ++ +ICR E + + S+F++ + +H + E+ Sbjct: 266 LHKNVLDAMVREQPLVDVATLICREFERIAPQLLTSIFSVDSNSNLHLLVAPSMPELLRQ 325 Query: 317 QSWSATIRQRDGAPAGIL-----------------------------------QIKTSSG 341 + + I GA + IK+S G Sbjct: 326 KVGNVPIGPNVGASGSAIWRGKQVMVKDAQRDELFADYRSLTEELHLGTCVATPIKSSGG 385 Query: 342 AETSAFI-------------ERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRN 388 +F R+ ++ H+ ALA+E+E++++ + QL +D +T LPNR Sbjct: 386 RVLGSFALYYREVCEPLPWHMRLIELCVHLCALAMEREQTKERVHQLAFYDALTNLPNRV 445 Query: 389 NLHNYLDDLVDKAV---SPVVYL-IGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPD 444 + + A SPV L + +D + V ++ G+ D L ++ R E++ Sbjct: 446 MFSARAEQALADAEYHGSPVAILFVDIDRFKRVNETQGHHAGDGLLRDIAQRLTEEMGVT 505 Query: 445 QYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLG 502 L R G +FV++ + A+ L +++P+++ + SIG++ + G Sbjct: 506 DLLSRQSGDEFVMMLPQCGAEQAAGTAERLLLALAEPVVVGHVTLHPSASIGVAMFPEDG 565 Query: 503 KNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQ 562 + + LL A AM + GG +++FS MN M +ER+ L AL++A+ N+L+L YQ Sbjct: 566 DDIETLLRHADLAMYRAKDEGGGSFRYFSSDMNRMAQERVALETALRDALHQNELQLHYQ 625 Query: 563 PQIFAETGE-LYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAE 621 PQ+F++ LYG+EAL RW P G++ P+RF+P+AEE G IE +G+W + EACRQ+A+ Sbjct: 626 PQVFSQAPHALYGVEALLRWEHPNLGNISPARFVPMAEECGLIEELGQWALREACRQMAD 685 Query: 622 WRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIF 681 WR + I +P ++VNLSA +F QLP +V + A+G+ L +E+TES+M+ + + Sbjct: 686 WRLRGIPVPRVAVNLSANNFAEPQLPARVEQMLSAYGLVADDLALEMTESVMLSNTAAVL 745 Query: 682 KRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAIT 741 ++ L+ GV LS+DDFGTG+S LS L LP+ E+K+D SFV AL ++ Sbjct: 746 DNLRQLQSSGVLLSLDDFGTGYSSLSHLHQLPINELKLDMSFVRDLEHSPTSRALTTSVL 805 Query: 742 SIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 IG++L + VAEGVET Q +L ++ C V+QG+ FSR LPA + W+ + Sbjct: 806 RIGETLGMHTVAEGVETDAQRSLLAELGCGVLQGFLFSRALPASALEQWLQA 857 >UniRef50_Q1LL50 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LL50_RALME Length = 873 Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust. Identities = 270/851 (31%), Positives = 414/851 (48%), Gaps = 93/851 (10%) Query: 17 ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHN 76 ALEQ + V ++ +++ FN AAE LWG +R V+G +L DLR A N Sbjct: 28 ALEQAIDAVVAVDARNQITLFNAAAEALWGLERTTVLGQCASVLALGDLRVA-------N 80 Query: 77 REGGK----ARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASV----- 127 + G+ AR +G R ++L I+ S A K + L DAS Sbjct: 81 GQSGQNLAIARADGTLRHVRLHIA----IFGTDGDSNPGAPAKQFAAFLHDDASTGNEPG 136 Query: 128 EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ-PDTLLN 186 R L + +DH + PV++ D I N FT + GY +A G + D L+ Sbjct: 137 ATLSPPGLRMLSLCLDHAENPVMITDAHGTICHLNGGFTRLLGYARHQAVGRRWQDLLMP 196 Query: 187 IPEFPADNRIRLQQLLWKTARD---QDEFLLLTRTGEKIWIKASISPVYDVL--AHLQNL 241 I P ++ LL A ++E L+ ++G+ W+ ++SP+ L N Sbjct: 197 INARPE----QIPSLLAPLAAGLPLRNEALVPDKSGQPRWLSVAVSPIMASTQSGGLVNT 252 Query: 242 VMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIE--------SVLNES--HV 291 V +DIT + ++ L A+ P ++ +CR +E +V+ S H+ Sbjct: 253 VWVLTDITATKVRESIQHRTLDALARDLPTAQIMNDLCRRVERMAPGTKAAVMRASNGHL 312 Query: 292 SLFALRNGMP----------IHWASSSHGAEI---------------------------Q 314 L A+ + P I S S GA Sbjct: 313 RLVAMPSATPDLLAAFDSLQIGLQSGSCGAAAFLGHAVAVEDIAQDPRCETLRETALAAG 372 Query: 315 NAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQ 374 A +WS +R DG G + + F E + ++ + ALAL ++++++ I + Sbjct: 373 MAATWSTPVRAADGRVLGTFALCFNEPRLPDGFHENLVGVAADLCALALVRDQTQERIHR 432 Query: 375 LIQFDPMTGLPNRNNLHNYLDDLVDKA---VSPVVYL-IGVDHIQDVIDSLGYAWADQAL 430 L +D +TGLPNR L + DD V +A +P+ L I +++ + V D G+ D+ L Sbjct: 433 LAYYDALTGLPNRQLLLSRADDAVARANAHGTPLALLFINLNNFKRVNDVQGHGAGDRFL 492 Query: 431 LEVVNRFR---EKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDD- 486 +EV +R + + D + R+ G +F ++ + + IADEL + PI + Sbjct: 493 IEVASRLQFATAEHARDATVGRLSGDEFAVLLPGHGHAEALAIADELLRALDPPITVAHG 552 Query: 487 -KPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGG----NGWQFFSPAMNEMVK 539 P P + SIGIS + ++R+ LL A A+ RK G N + + + Sbjct: 553 LSPSP-SASIGISMLTEQTRDRETLLHHADLAVCQARKRSGPDLGNQICVYDTVLARRLG 611 Query: 540 ERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAE 599 +R +L L+EAI + QL++ YQPQI +G L+ +EALARW P G + P+ F+PLAE Sbjct: 612 DRRMLECELREAIGSGQLQMRYQPQIHLASGNLWAVEALARWPHPHRGDIAPTVFVPLAE 671 Query: 600 EIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGI 659 E G I +G W + EAC Q A WR + +PA+SVNLS L R LP+ V+ A+ + Sbjct: 672 ESGLIVALGYWAVREACAQQARWRRRGAAVPAISVNLSPLSIRDPALPDVVAQALRTHAL 731 Query: 660 DGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKI 719 +LT+EITES+ ++H +E I LR +GV LS+DDFGTGFS LSRL+ LPV EIK+ Sbjct: 732 PAGELTIEITESVFLDHTSEAEATIAALRKLGVRLSIDDFGTGFSSLSRLMQLPVDEIKL 791 Query: 720 DKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFS 779 D+SF+ T + L+EA+ IG++ +LTVVAEGV + Q + L C V QG+ F+ Sbjct: 792 DRSFLVDLETSEATRTLVEAVIRIGRARDLTVVAEGVTSALQRQFLLDQGCHVGQGFLFA 851 Query: 780 RPLPAEEIPGW 790 +PLPA I W Sbjct: 852 QPLPAASIERW 862 >UniRef50_B1KCF3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Burkholderia cenocepacia MC0-3 RepID=B1KCF3_BURCC Length = 935 Score = 356 bits (913), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 221/728 (30%), Positives = 364/728 (50%), Gaps = 64/728 (8%) Query: 131 QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP-- 188 ++E+ L +A++H D +V P+ +V N FT+M GY +SE G +P + P Sbjct: 213 RREKLNLLSLALNHTDSAAVVTTPDGRVVYANEGFTQMLGYKMSEILGKRPTDFVVGPYS 272 Query: 189 EFPADNRIRLQ---QLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 +F + IR + L +KT + L+ +++G +WI A+++PV+D +N+V + Sbjct: 273 DFGTVSDIRAKVGAHLSFKT-----KILVYSKSGHPLWILATVNPVFDARGVCKNVVGIW 327 Query: 246 SDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRN------- 298 +DIT + +L+ +L AM P + ++C E + S+ + + Sbjct: 328 TDITSTKIHEELQRKVLGAMAREEPLANVTTLVCHEAERIAPAVTASIRRIDDDGKLWTL 387 Query: 299 ---GMPIHWASSSHGAEIQN--------------------------------------AQ 317 +P+ +A + G I Sbjct: 388 AAPSLPMEYARAIDGLRIAPDFVERIAAGPFGRHIAFPTTSPDEAYASHSALAISFGFTS 447 Query: 318 SWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQ 377 W IR DG G L + SA + + D S ++ ALALE+E S++ I +L Sbjct: 448 CWWHPIRSTDGRTLGTLSFYYRESHQPSALHQELVDASLNLCALALEREGSKERIRRLAF 507 Query: 378 FDPMTGLPNRNNLHNYLDDLVDKAV----SPVVYLIGVDHIQDVIDSLGYAWADQALLEV 433 +D +TGLPNR L + + ++ AV S V + ++ + V D+LG+A D L EV Sbjct: 508 YDGLTGLPNRQLLMSQAESVLAAAVASQHSFAVMFVDLNSFKQVNDTLGHAAGDGLLSEV 567 Query: 434 VNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTL 493 R + L+ + R+ G +FV+V D+ A+ N + +P+ I D Sbjct: 568 AQRLKIDLRDTDIVGRLSGDEFVIVLSPADIELTLDFAERTMNRLRQPVQISDTNLRPAA 627 Query: 494 SIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEA 551 S+GI+ G++ L+ A AM + G + ++ F P + + R LG AL+++ Sbjct: 628 SMGIAIFPQHGESIGALMQHADMAMYEAKFAGHHEYRVFEPELMRAREARRKLGLALRDS 687 Query: 552 ISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWV 611 + +L+L YQPQ+ + LYG+EALARW G+V P FIPL EE G + RWV Sbjct: 688 LVAGELQLHYQPQVRLDDDSLYGVEALARWFHRDFGNVAPDHFIPLVEECGLVAEFNRWV 747 Query: 612 IAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITES 671 + EACRQLA+W + +P +SVN+S FR + VS + + + QLT+E+TE+ Sbjct: 748 LTEACRQLAQWCEAGLDVPRISVNISPTAFRDPAFASLVSSLLGTYKLAPSQLTLEVTEA 807 Query: 672 MMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEK 731 ++++ + IQ + +GV +++DDFGTG+S LS L LPV E+K+DKSF+ + Sbjct: 808 VLLDATDSVMTTIQDVHSLGVNMAIDDFGTGYSSLSYLRRLPVNEVKLDKSFISNVENSE 867 Query: 732 RILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 +L+ ++ I L+LT+VAEGVET Q ++L+ +V QGY FS P+ A E+P W+ Sbjct: 868 NARSLVNSVADICAKLHLTIVAEGVETDVQRQILQARGYQVAQGYLFSPPIEAAELPVWI 927 Query: 792 SSVLPLKI 799 + L +I Sbjct: 928 NVTLSGRI 935 >UniRef50_B2SVB0 C-di-GMP phosphodiesterase A n=11 Tax=Xanthomonas RepID=B2SVB0_XANOP Length = 747 Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 210/721 (29%), Positives = 351/721 (48%), Gaps = 55/721 (7%) Query: 128 EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI 187 E ++ ++R L A+D +++ D + ++ N F MFGY +E G +P +L Sbjct: 25 EQPEQRRSRLLAEALDGSSSAILICDLQSRLLYANDGFQRMFGYTEAELVGQRPSDVLTR 84 Query: 188 PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSD 247 + R++ + E L+ + G +WI + +P+YD + V +D Sbjct: 85 AQSDQSEVARVRDRADALQHTRAELLVYRKDGTPLWISLNFNPIYDADHTPLHYVAVLTD 144 Query: 248 ITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRN--------- 298 IT+ + L+ +L A+ P E+ +IC +E + + ++ + N Sbjct: 145 ITDTKMHEVLQHRVLEALLQERPLIEVMTLICTEVERIAPDVLAAVTSADNQGRLHSLAA 204 Query: 299 -GMPIHWASSSHGAEIQNAQS--------------------------------------W 319 +P +A + +G +I W Sbjct: 205 PSLPPEYADAVNGLKIGPGAGACGTAAWRGRAVMVEDIATDPLFEPCRETMLRWDLHACW 264 Query: 320 SATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFD 379 S IR G + +A+ R+ D+ Q + LALE+E+ RQ + QL +D Sbjct: 265 STPIRSNSARVLGTFALYYRKPQHANAWHMRLTDLCQQLCTLALEREQIRQRVHQLAFYD 324 Query: 380 PMTGLPNRNNLHNYLDDLVDKAV----SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVN 435 +TGLPNR + + +A + I +D + + DS G+A D L ++ Sbjct: 325 TLTGLPNRIMFSARAEQALTQAEYAGEPAALVFINIDRFKLINDSQGHAAGDGLLRDIAL 384 Query: 436 RFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSI 495 R ++L L R+ G +F L + + +A+ + ++ P+ + + SI Sbjct: 385 RINDQLTATAMLARLSGDEFALALPQCSAEQASAVAERVLVSIANPLPVGHMTVHPSASI 444 Query: 496 GISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAIS 553 G++ + G+ + LL A AM+ +K GG ++FFS MN M +ER+ L A L++AI Sbjct: 445 GVAMFPEDGREINILLRHADLAMNRAKKEGGGRFRFFSADMNRMAQERVALEAELRQAIG 504 Query: 554 NNQLKLVYQPQIF-AETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVI 612 +QL+L YQPQI A LYG+EAL RW+ P G V P++F+ +AEE G + I WV+ Sbjct: 505 RDQLQLHYQPQIHSAAPHTLYGVEALLRWNHPQLGAVSPAQFLQVAEEQGMMPQINAWVL 564 Query: 613 AEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESM 672 AC+Q+A+WR + + + +SVNLSA F S ++ + + + G+ LT+E+TES+ Sbjct: 565 RSACQQVADWRQRGVPVARVSVNLSASGFESPRMLSDLLQLIADMGVKPSDLTLELTESV 624 Query: 673 MMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKR 732 M+ + + + +R+ G+ LS+DDFGTG+S LS L LP+ E+K+D SFV + Sbjct: 625 MLSGQPGVLENLHAIREAGISLSLDDFGTGYSSLSHLHRLPIDELKLDMSFVRDIEHSED 684 Query: 733 ILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 AL+ ++ IG+ L VVAEGVE + Q L + C V+QGY FSRPLPA + W+ Sbjct: 685 ARALITSVLRIGEHLRKHVVAEGVENEAQRLFLADLGCEVLQGYLFSRPLPAAALEAWLG 744 Query: 793 S 793 + Sbjct: 745 A 745 >UniRef50_C4UW07 Phosphodiesterase n=1 Tax=Yersinia rohdei ATCC 43380 RepID=C4UW07_YERRO Length = 875 Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 251/819 (30%), Positives = 401/819 (48%), Gaps = 86/819 (10%) Query: 45 WGYKREEVIGNNIDMLIPRDLRPAHPEY--IRHNREGGKARVEGMSRELQLEKKDGSKIW 102 +GY+R+EVIG + M P D + EY I+ G++ +EG L KDGS +W Sbjct: 65 FGYQRDEVIGQHHLMFCPHDYATSD-EYRTIKQCLRAGES-LEGTFERLH---KDGSTVW 119 Query: 103 TRFALSKVSA-EGKVY-YLALVRDASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDPER 156 V +G + + + +D + + Q++ T++ L D D + + + Sbjct: 120 LAAIYQPVPGPDGTLTRVVKIAKDITFLIEQQKATQEWVQLLTQLTDRSDSAMFISANSK 179 Query: 157 H---IVQCNRAFTEMFGYCISEASGMQPDTLLNI--PEFPADNRIRL----QQLLWKTAR 207 V N+ FT++FGY +A G LL PE A L QQLL K Sbjct: 180 QGQQAVYINQGFTKLFGYTPEQALGQNMVDLLQSEHPEQLALMDSTLPDTHQQLLPKE-- 237 Query: 208 DQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCS 267 L ++ + W A I+ + + + +DIT + L+ +L A+ Sbjct: 238 -----LFYSKDRQPHWCSAVINSLANGQGEQSYSIGVLTDITMTKMYEVLQYKVLEALVR 292 Query: 268 SPPFHEMGEIICRNIESVLNESHVS-LFA---------------------LRNGMPIHWA 305 P E+ ++C +E + E S LFA L N +PI + Sbjct: 293 ERPLAEVMSLLCNEVERIAPEVTASILFADGPDTLSHLAAPNLPSIYTDSLIN-VPIGPS 351 Query: 306 SSSHGA--------EIQNAQS-------------------WSATIRQRDGAPAGILQIKT 338 + S G E+Q+ + WS I G Sbjct: 352 AGSCGTAAFRKEPVEVQDIATDPLWAGYRHLVLPHGLLACWSTPIFSSQEKVIGTFAFYY 411 Query: 339 SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV 398 S F ++ + ++ +LA+E+E SR+ I+QL +DP+TGLPNR+ Y + Sbjct: 412 KQVRSPSEFHRQLVKLIANLCSLAMERELSRKQIQQLAFYDPLTGLPNRSQFLVYAQQAI 471 Query: 399 DKAV----SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQ 454 A S V +I +D + V DSLG+A D+ L + R R +L + + R+ G + Sbjct: 472 TLATESGHSLAVLVINLDRFKQVNDSLGHAAGDELLAAIAQRLRHELSKNDLIGRLSGDE 531 Query: 455 FVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTA 512 F++++ + T ++L +++S+P +I + SIGIS + G D L++ A Sbjct: 532 FIILA-PCTMQQATVKVEKLLSLLSQPCIIASVNIIPSASIGISLYPENGVGMDMLMNHA 590 Query: 513 HNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGEL 572 AM +K G + FFS MN + ++R + AL+ A L+L YQPQ+ + G L Sbjct: 591 DIAMHKAKKLGSGHFNFFSVEMNNINQQRQDMEDALRHAFHIGSLQLFYQPQVMLKDGHL 650 Query: 573 YGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPAL 632 YG+EAL+RW P+ G +PP+RFIP+AEE G I + W + AC+QLA+WR + + IP++ Sbjct: 651 YGVEALSRWIHPVLGDIPPNRFIPIAEECGLINELALWALNTACQQLADWRLRGVDIPSV 710 Query: 633 SVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGV 692 SVNLS +F + LP+ +S + + + LT+EITE +++E++ IF IQ + +GV Sbjct: 711 SVNLSPSNFHNPGLPDTISSILQHYNLPPQDLTLEITEDILIENNPAIFATIQKIHRLGV 770 Query: 693 GLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVV 752 LS+DDFGTG+S LS L L + EIK+DKSFV ++ L EA+ IG+SL L+V+ Sbjct: 771 RLSMDDFGTGYSSLSYLRRLDLDEIKLDKSFVHDLEYDETSRTLSEAVIRIGESLQLSVI 830 Query: 753 AEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 EGVE + Q +L + ++ QG+ FS LPA ++ W+ Sbjct: 831 VEGVENEAQRTLLSRQGYQIGQGFLFSEALPAIKLEKWI 869 >UniRef50_C4T5P6 Phosphodiesterase n=8 Tax=Yersinia RepID=C4T5P6_YERIN Length = 865 Score = 322 bits (826), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 234/830 (28%), Positives = 398/830 (47%), Gaps = 79/830 (9%) Query: 31 NDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHN--REGGKARVEGMS 88 N ++ N +GY+R+EVIG + M H +Y + K + G S Sbjct: 39 NSRIIAVNQNYLDYFGYQRDEVIGQHHLMF-------CHQQYANSEEYQTLKKCLLAGKS 91 Query: 89 RELQLEK--KDGSKIWTRFALSKVSA-EGKVYYLA-LVRDASVEMAQKEQTRQLIIAVDH 144 E + E+ K+GS +W V +G V + + +D + + Q++ T++ + + Sbjct: 92 VEGRFERLHKNGSTVWLAAIYQPVPGPDGTVTRMVKIAKDITFLIEQQKATQEWVQLLTQ 151 Query: 145 L-DRP----VIVLDPER--HIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIR 197 L DR I + E+ V N+ FT++FGY +A G ++++ + ++R Sbjct: 152 LTDRSDSAMFIAANSEQGQQAVYINQGFTKLFGYTPEQALG---QNMVDLLQSAHPEQLR 208 Query: 198 LQQLLWKTARDQ--DEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIR 255 L +R Q + L ++ + W A I+ + D + +DIT + Sbjct: 209 LMDSTSPNSRQQLLPKELFYSKDQQPHWCSAIINSLVDEQGKPSYSIGVLTDITLTKMYE 268 Query: 256 QLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLF--------------------- 294 L+ +L A+ P E+ ++C +E + E S+ Sbjct: 269 VLQYKVLEALVKERPLEEVMSLLCHEVERIAPEVTASILQVSGQNHLNHLAAPSLPLIYT 328 Query: 295 ALRNGMPIHWASSSHGA--------EIQNAQS-------------------WSATIRQRD 327 A +PI S S G E+++ + WS+ I Sbjct: 329 AALACVPIGPISGSCGTAAFRKEPVEVRDIATNPLWESYRHLILPYGWLACWSSPIMSSQ 388 Query: 328 GAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNR 387 G G L S F ++ + ++ +LA+E+E+S + I++L +D +TGLPNR Sbjct: 389 GNVLGTLAFYYKEVRGPSEFHIQLVKLIANLCSLAMEREQSHKQIQRLAFYDSLTGLPNR 448 Query: 388 NNLHNYLDDLVDKAV----SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKP 443 Y + A + V +I +D + V DSLG A D+ L + R R ++ Sbjct: 449 TQFLIYAKQALALATETNYTLAVLVINLDRFKQVNDSLGLAAGDELLALIAQRLRSEMSK 508 Query: 444 DQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DL 501 D + R+ G +F+++ + T +++ +++S+P I + S+GIS + Sbjct: 509 DDIIGRLSGDEFIIILAPCTMQQATVKVEKMLSLLSQPCQIASVNIIPSASVGISLYPEN 568 Query: 502 GKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVY 561 G D L++ A AM + G + FFS MN + ++R + AL++A L+L Y Sbjct: 569 GLEMDALMNHADIAMHKAKDMGRGHFNFFSAEMNTLNQQRQDMEDALRQAFHIGSLELFY 628 Query: 562 QPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAE 621 QPQ+ + G +YG+EAL+RW P+ G++PP RFIP+AEE G I + W I AC QLA+ Sbjct: 629 QPQVMLKDGNIYGVEALSRWMHPILGNIPPQRFIPIAEECGLINELALWAIETACHQLAD 688 Query: 622 WRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIF 681 WR + I +P++SVNLS +F + LP+ + + + + LT+EITE +++ ++ IF Sbjct: 689 WRLRGIDVPSISVNLSPTNFNNQGLPDMILHILQHYHLPPQDLTLEITEDILITNNQAIF 748 Query: 682 KRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAIT 741 I+ + +GV LS+DDFGTG+S LS L L + EIK+DKSFV ++ L EA+ Sbjct: 749 AIIEKIHRLGVRLSMDDFGTGYSSLSYLRRLDLDEIKLDKSFVHDLEHDETSRTLSEAVI 808 Query: 742 SIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 IG+SL L+V+ EGVE + Q +L + ++ QG+ FS L A ++ W+ Sbjct: 809 RIGESLQLSVIVEGVENEAQRTLLSRQGYKIGQGFLFSEALSAGKLEQWL 858 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 322 bits (824), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 240/806 (29%), Positives = 397/806 (49%), Gaps = 85/806 (10%) Query: 37 FNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKK 96 +N AE++WGY EE+IG + +L P + P I V SR L K Sbjct: 186 WNKGAERMWGYAAEEIIGQPVTVLPPL-AKQGEPGQILRRVIDEHEVVRFESRGLH---K 241 Query: 97 DGSKIWTRFALSKV-SAEGKVYYL-ALVRDAS----VEMAQKEQTRQLIIAVDHLDRPVI 150 DG +S + AE ++ + A++RD + ++ +E+ + + + + ++ Sbjct: 242 DGRDFPISLTVSPLFDAENRLTGVSAIIRDITEMERLKATLQERLKLVEMVFQYSVSCLV 301 Query: 151 VLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQD 210 VLDP+ + ++ N A+ ++E G L +P+D R ++++ R + Sbjct: 302 VLDPQFNFIRVNPAYARACRRDVAEFEGRNHFEL-----YPSDARFIFEEVV----RTRR 352 Query: 211 EFLLLTR---------TGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER----QIRQL 257 F + R G W ++ PV D ++ L+ + D+T+ + Q+R + Sbjct: 353 PFEAVARPFTFPDQPERGVTYW-DWNLVPVLDGKGEVEYLLFSLVDVTDRQKATAQLRLI 411 Query: 258 EGNIL----AAMCS---------SPPF-----HEMGEIICRNIESVLNESHVSLFALRNG 299 E A + + +P F + GE++ R + + H F R Sbjct: 412 ETAFQHTRDAVLITDARARILRVNPAFETITGYSAGEVVGRTPRMLQSGRHDGAFYRR-- 469 Query: 300 MPIHWASSSHGAEIQNAQSWSATI--RQRDG----APAGILQIKTSSGAETSAFIERVAD 353 W + ++ WS I R RDG A + +K G+ T+ ++ D Sbjct: 470 ---FWRA------LETEGHWSGEIWNRHRDGHIFPAWQSVSAVKGPDGS-TTHYVSIFTD 519 Query: 354 ISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLI 409 IS E +++ I L D +TGLPNR LD L++ A + ++ Sbjct: 520 IS--------EFKRAEAQIRYLSYHDDLTGLPNRAYFQARLDQLIEAAARDRKQIALVVL 571 Query: 410 GVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQ 469 +D + + DSLG++ D+ L +V R ++ ++ R G +FV++ ++D + Sbjct: 572 DLDRFKTINDSLGHSVGDELLCQVAERIQDCTGQGDFVARQGGDEFVVILADSDAVRAAR 631 Query: 470 IADELRNVVSKPIMIDDKPFPLTLSIGIS---YDLGKNRDYLLSTAHNAMDYIRKNGGNG 526 +A+ + + ++KP + + +T S+GIS +D G + + L+ +A AM + + G N Sbjct: 632 VANAMISAIAKPAVAGGRTLIVTPSLGISLYPHDAGDS-ESLIKSADAAMYHAKSLGRNT 690 Query: 527 WQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLH 586 +QFFS M+ + ERL L AL +A+SN + +L YQPQI + L G+EAL RW P Sbjct: 691 YQFFSAEMSAVATERLALENALHQALSNGEFRLYYQPQIEVCSRRLIGLEALIRWRHPEV 750 Query: 587 GHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQL 646 G VPP RFIPLAEE G I IGRWV+ EACRQ EW++ + I ++VNLS L + + Sbjct: 751 GWVPPLRFIPLAEETGIIHRIGRWVLEEACRQQREWQAAGLCIVPVAVNLSPLQLQKDDF 810 Query: 647 PNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGL 706 P QV + + L +E+TE+ +M + ++ L++ G S+DDFGTG+S L Sbjct: 811 PEQVEALLSGCRLAPGLLELELTETAVMRDVGRMSDMLRKLKERGTRFSIDDFGTGYSSL 870 Query: 707 SRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLR 766 L PV ++KID+SF+ + A+ AI ++ + L+L VVAEGVET EQ E L Sbjct: 871 GYLNRFPVDKLKIDQSFIRDVTRREDHAAITRAIIALAKQLHLKVVAEGVETAEQLEFLE 930 Query: 767 KIHCRVIQGYFFSRPLPAEEIPGWMS 792 + C QG++FSRP+PA+EI GW+S Sbjct: 931 RAGCDGAQGFYFSRPVPADEIAGWLS 956 >UniRef50_B1XYS1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XYS1_LEPCP Length = 784 Score = 311 bits (798), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 201/712 (28%), Positives = 334/712 (46%), Gaps = 66/712 (9%) Query: 149 VIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARD 208 +V + I + + + G ++ G +P+ +L P RLQ + R Sbjct: 56 ALVCGADGRITEVSDSCGRWLGLAAADLLGRRPEQVLAGPGATIPGWERLQDQARRHGRA 115 Query: 209 QDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSS 268 E L+ G +W + + ++T +DIT++R + +L+G +L A+ Sbjct: 116 GTEALVHGHGGRPLWCTLVLDALPAAQGEPDTWLLTLADITQQRILTELQGPVLGALVRD 175 Query: 269 PPFHEMGEIICRNIESVLNESHVSLFALRN---------------------GMPIHWASS 307 P E+ ++C ++ + + ++ + + G PI + Sbjct: 176 RPLAEVMALVCTQVQILAPDVVATVLGVDDDGLIRPLAGPSIPAEVSCQFDGAPIGPKAG 235 Query: 308 SHGAEIQNAQ---------------------------SWSATIRQRDGAPAGILQIKTSS 340 S G WS+ I+ +G Sbjct: 236 SCGTAAWRGSPVVVTDIDTDPLWDDYRHVVQPLGLRACWSSPIKNGEGRVLATFAFYFRE 295 Query: 341 GAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDK 400 E++ ++S H+ LALE+E+S HI QL +D +TGLPNR L L + + Sbjct: 296 PRAPHGLHEQLVEMSVHLCTLALERERSHAHIHQLAYYDGLTGLPNRALLQANLARAITQ 355 Query: 401 A----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFV 456 A + + I +D +DV DS G+A D+ L EV R +++ +CR+ G +FV Sbjct: 356 AQQDGTTLALLFIDLDRFKDVNDSHGHAVGDELLREVAQRLAGEVRDRSLVCRLAGDEFV 415 Query: 457 LVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHN 514 +V V A+ ++ +++PI + D +G++ D G + D LL A Sbjct: 416 VVLPHCGVEQARHTAERVQQALARPITVGDLDLTTGACLGVAMYPDDGSDLDRLLRHADA 475 Query: 515 AMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFA------- 567 AM +K+G G F+ MN ++RL L A L+ A+ L+L +QPQ+ Sbjct: 476 AMYQAKKDGRGGLHFYRAEMNRAAEDRLRLAADLRAALHRGGLQLHFQPQVCPPGKTPRS 535 Query: 568 -----ETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEW 622 + L+G+EAL RW P+ G V P RFIP+AEE G ++ + WV+ AC QLA W Sbjct: 536 PAAGPASMSLFGVEALLRWRHPVLGDVSPERFIPVAEEAGLMDELSNWVLEAACAQLAGW 595 Query: 623 RSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFK 682 R+ I +P ++VNLS +F+ LP +V + G+ G QLT+E+TES ++ + Sbjct: 596 RADGIDVPRVAVNLSPRNFQDPGLPARVRQLLDRHGLRGDQLTLELTESAWIDRRADSLD 655 Query: 683 RIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITS 742 +++ L+ +GVGL++DDFG G S LS L LP+ ++K+D+SFV L A+ Sbjct: 656 KLRALQALGVGLAMDDFGNGQSSLSHLHRLPLRQLKLDRSFVHDIEHLAVAQTLAAAMLH 715 Query: 743 IGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 IG+SL L VVAEG+ET Q L + C V+QG +++ + AE+I W++ + Sbjct: 716 IGESLGLIVVAEGIETAAQAAFLIEHGCPVLQGDRYAQSMAAEQIGPWLAGL 767 >UniRef50_B5ZF69 Diguanylate cyclase/phosphodiesterase n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZF69_GLUDA Length = 603 Score = 310 bits (794), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 164/449 (36%), Positives = 260/449 (57%), Gaps = 4/449 (0%) Query: 349 ERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA-VSPVVY 407 E++ + +E ++R+ ++Q+ + D +TGLPNR + + L + + SP Sbjct: 145 EKIVSHCRSSCVAIIEYGRTRRRLDQIDRHDALTGLPNRAAIFDLLQKMTTETPTSPFAL 204 Query: 408 LI-GVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSN 466 +I VD QD D++GY D+ L V RF + D + R+ G F +V + Sbjct: 205 IILDVDLFQDFNDAMGYEQGDRLLQIVACRFSTHCRGDAVIGRLGGDNFAIVIPGEQDTA 264 Query: 467 ITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGG 524 +A +L + PI I + ++ S GI + G + ++ A A+ +K Sbjct: 265 ANDLARDLVATLRSPIRIRGQDIVISCSTGIGTFPENGTEVEQVVHHAQIALREAKKATR 324 Query: 525 NGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDP 584 Q A + V+ R++LG+A+++A+ ++ +L YQPQI E+G +YG+EALARW+ P Sbjct: 325 GSVQNAPAATGDDVEARVLLGSAMRKAVQKSEFRLFYQPQICMESGTIYGVEALARWYHP 384 Query: 585 LHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSN 644 G + PS+FIP+AE+ G+IE I RW + EACRQ+AEW + +P +SVN+SA+ R+ Sbjct: 385 AMGLIQPSQFIPVAEQTGQIEIIDRWSMEEACRQMAEWDRAGMRLPTVSVNVSAVSIRNT 444 Query: 645 QLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFS 704 LP +++ + + ++ +LTVEITES MM+ + + + +G+GL++DDFGTGFS Sbjct: 445 DLPRRIAALLKRYRLEPRRLTVEITESAMMQQSRDTGATLSAMLAIGIGLALDDFGTGFS 504 Query: 705 GLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEM 764 LSRL LP+TEIKID+SFV + + + EA +IG+ L + VV EGVE Q Sbjct: 505 SLSRLTHLPLTEIKIDRSFVTSLERDVGSMIVTEAAITIGKRLGVKVVTEGVEEIAQVRK 564 Query: 765 LRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 LR++ C V+QGY S+PLP+ EIP W+ S Sbjct: 565 LRQLGCDVVQGYLISKPLPSAEIPNWLQS 593 >UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACK6_ALHEH Length = 857 Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 174/459 (37%), Positives = 255/459 (55%), Gaps = 13/459 (2%) Query: 338 TSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDL 397 T+ E + +I +DI+ H AA QHI+ L +D +TGL NR L L+ + Sbjct: 396 TNDNDEVTHYIGIASDITSHKAA--------EQHIDYLAHYDTLTGLGNRRLLEEELERM 447 Query: 398 VDKAVSP---VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQ 454 + A ++ + +D +++ D+LG+ D+ L EV +R R+ P LCRI G + Sbjct: 448 LRNARGGRPFALFFLDLDRFKNINDTLGHESGDRLLEEVADRLRDLAGPQATLCRIGGDE 507 Query: 455 FVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDL--GKNRDYLLSTA 512 F +++ IA +L +S+P I ++P +T S+G++ G R+ L+S A Sbjct: 508 FAILAPGLSHRQTAGIARQLVEGISRPYEITERPLVVTCSVGVAVHPRDGTRREALISAA 567 Query: 513 HNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGEL 572 A+ Y++ +G N +QF P M ERL L L+EA+ + +L YQP + E + Sbjct: 568 DTALHYVKAHGSNHYQFHEPGMTAAAAERLHLENDLREALLRGEFELYYQPVLDTERLTV 627 Query: 573 YGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPAL 632 G EAL RWH P G +PP RFIPLAEE G I IG WV+ EAC Q A WR + + Sbjct: 628 CGAEALLRWHHPEAGLIPPDRFIPLAEETGLIRPIGTWVLREACAQAARWRRLGLTGMTV 687 Query: 633 SVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGV 692 SVN+S F ++LP V A+ A + L +EITES++M R++ L+ MGV Sbjct: 688 SVNVSGEQFWRDELPQAVRQALEAQALAPDALVLEITESVLMHGSANTETRLRELKAMGV 747 Query: 693 GLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVV 752 GLS+DDFGTG+S LS L P+ +KIDKSFV + ++ L + + ++G L L VV Sbjct: 748 GLSLDDFGTGYSSLSYLKRFPIDTLKIDKSFVRDMVRDEHDRTLAQTVIAMGHGLGLQVV 807 Query: 753 AEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 AEGVE+ E +LR+ C +QGY FSRPLPA + W+ Sbjct: 808 AEGVESAEHLPLLRRARCDRVQGYHFSRPLPARALSRWI 846 >UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPG4_9GAMM Length = 862 Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 156/421 (37%), Positives = 260/421 (61%), Gaps = 10/421 (2%) Query: 379 DPMTGLPNRNNLHNYLDDLVDKAV----SPVVYLIGVDHIQDVIDSLGYAWADQALLEVV 434 D +T LPNR + LD ++ + + + I +DH +++ D+LG++ D+ L +V Sbjct: 442 DHLTSLPNRMHSSTQLDLMISHTIKHQATAALLFIDLDHFKEINDTLGHSTGDELLRKVS 501 Query: 435 NRFREKLKPDQYLCRIEGTQFVLVS--LENDVSNITQIADELRNVVSKPIMIDDKPFPLT 492 R R ++ + + R+ G +F +++ LE S+ IA +L N + +P +ID +T Sbjct: 502 QRLRRSVREEDIVARLGGDEFTVITGVLETR-SDAESIAQKLLNELIRPYLIDGNELSVT 560 Query: 493 LSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKE 550 SIG+S+ + G N + LL A +AM ++NG NG++ ++ AM E + ER L L+E Sbjct: 561 ASIGVSFFPEDGDNSEILLRNADSAMYEAKRNGRNGYRLYTSAMTEEISERFALTEELRE 620 Query: 551 AISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRW 610 AIS +L+L +QPQ+ TG + G EAL RW+ P G +PP RFIP+AE G++ IG W Sbjct: 621 AISREELELYFQPQVDIRTGSILGAEALLRWNHPQRGMIPPDRFIPIAESSGQMIKIGAW 680 Query: 611 VIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITE 670 V+ + C ++A W+ + I P ++VN+S + +L Q+++ + + D L +EITE Sbjct: 681 VLEQVCAKVAGWKERGIVAPKIAVNISNQQM-NRELVEQITELLASSKCDPACLELEITE 739 Query: 671 SMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTE 730 S +ME+ ++ + L+ +GVG+++DDFGTG+S LS L LP+ ++K+D+SFV + Sbjct: 740 SCLMENPEQMAHELSSLKALGVGIAIDDFGTGYSSLSYLKQLPINKLKVDRSFVSDLQDD 799 Query: 731 KRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 + LA+ AI ++GQS+NL V+AEG+ET+EQ ++L K+ C QGYF+S+PLP E+ + Sbjct: 800 ENDLAITRAIVAMGQSMNLNVIAEGIETQEQIDLLLKLECFEGQGYFYSKPLPEEQFLAY 859 Query: 791 M 791 + Sbjct: 860 L 860 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 239/833 (28%), Positives = 394/833 (47%), Gaps = 118/833 (14%) Query: 24 GAVLINENDEVMFFNPAAEKLWGYKREEVIGNNI-DMLIPRDLRPAHPEYI-------RH 75 G + + ++ NPAAE+L+GY+ E G ++ D+L R +P H Sbjct: 96 GIISFDGAGRLLSLNPAAEQLFGYQSAEATGRSLGDILAIRSTGKDNPLLTPLVCCGEEH 155 Query: 76 NREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQT 135 +R +A EG+ + DGS+ +LS+V +G ++L +VRD + E+ Sbjct: 156 SRLTCEA--EGI-------RSDGSRFPAALSLSRVQMKGVWHFLGIVRDVTESRETGERL 206 Query: 136 RQLIIAVDHL----DRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFP 191 R+ +D L + ++ +D + NRA E+FG+ E G +P P P Sbjct: 207 RETNEKLDTLIQASPQGIVAVDCGGKVTLWNRAAVEIFGWSAEEVLG-KP-----YPVAP 260 Query: 192 ADNRI---RLQQLLWKTARDQD-EFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSD 247 A+ +L++L+ + R D E + G I + S +P+ D ++ SD Sbjct: 261 AERAAEHRKLRELVLQGKRITDVELRRRRKDGSPIDVSLSAAPICDGSGTPLGVITIISD 320 Query: 248 ITEERQIRQLEGNILAAMCSS--------------------PPF-----HEMGEIICRN- 281 I+ ++ Q + AM SS P F + + E+I +N Sbjct: 321 ISARKRNEQELVLLKRAMESSINGITITDATHPDNPIIYVNPAFERITGYGVDEVIDKNP 380 Query: 282 ---------------IESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQR 326 + E F LRN G+ N + + A +R R Sbjct: 381 RFLRGDDRDQAELKKLVQAFKEEREGCFVLRN-------YRKDGSPFWN-ELFIAPVRDR 432 Query: 327 DGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLI---QFDPMTG 383 DG + +I + DI++H R++ EQL+ DP+TG Sbjct: 433 DGV--------------VTNYIGVMNDITEH-----------RRYEEQLVYQATHDPLTG 467 Query: 384 LPNRNNLHNYLDDLVD----KAVSPV-VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFR 438 LPNRN L + L + + +P+ V + +D+ + V D+LG+ D L V NR + Sbjct: 468 LPNRNLLQDRLGQALALEAFRRRNPICVMFLDLDNFKKVNDTLGHTVGDMLLKAVANRLK 527 Query: 439 EKLKPDQYLCRIEGTQFVLVSLEN--DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIG 496 L+ + R+ G ++++V L N +V ++ +A ++ NV + P+++ +T SIG Sbjct: 528 NCLRGGDTVARLGGDEYIIV-LPNVREVPDVITVAKKMINVFAAPLLLMGNEIYVTASIG 586 Query: 497 ISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISN 554 I+ G+ D LL A AM + ++ G N +QF+S MN V ERL L +L A+ N Sbjct: 587 IALFPTDGETVDALLKNADAAMYHAKEQGKNNYQFYSAEMNIRVFERLSLETSLHRAVKN 646 Query: 555 NQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAE 614 + L YQP++ G + G+EAL RW+ P G V P++FIPLAEE G I +G WV+ Sbjct: 647 QEFLLHYQPRVDLRNGRICGVEALVRWNHPEMGLVSPAKFIPLAEETGLIVPMGEWVLRT 706 Query: 615 ACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMM 674 AC Q W+ + ++VNLSA FR L V + + G+ L +E+TES++M Sbjct: 707 ACAQNKAWQDAGLPPLRMAVNLSARQFRQENLIAMVEEILMETGLAPQWLELELTESLVM 766 Query: 675 EHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRIL 734 + + ++ L D G+ +++DDFGTG+S LS L P+ +KID++F+ + Sbjct: 767 QEAEKSAAILRELTDRGIEVAIDDFGTGYSSLSYLKRFPIANLKIDQAFIRDMTRDPDDA 826 Query: 735 ALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 L++ I ++ L + +AEGVE EQ + L + C +QGY+FSRP+ AEE+ Sbjct: 827 TLVKTIITMAHGLGMKTIAEGVELAEQIDFLCRHQCEEMQGYYFSRPITAEEL 879 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 227/737 (30%), Positives = 361/737 (48%), Gaps = 74/737 (10%) Query: 101 IWTRFALSKVSAEGKVYYLALVRDAS------VEMAQKEQTRQLIIAVDHLDRPVIVLDP 154 +++R + + + + VR AS E KE +L VD + ++V+DP Sbjct: 241 VFSRRPIRETHLAASMLQVFAVRAASELERRQAERVLKETEARLKTIVDSVHTGILVIDP 300 Query: 155 ERH-IVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFL 213 E H IV N G E G + E LQQ L RD Sbjct: 301 ENHRIVDVNELAASSLGRTREEMIGTSCHRFICPNEEGRCPITDLQQELDNEERD----- 355 Query: 214 LLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQ----------------- 256 L+ G ++ + ++S V VL ++L+ +F DI+ +Q+ Sbjct: 356 LIRADGSRLPVIKTVSRV--VLDGREHLLESFVDISRRKQVENSLKESEERYRMLVENQA 413 Query: 257 -------LEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSH 309 + GN+L SP F ++ + E +L ++ + + L P A+++ Sbjct: 414 DLVIKTDMTGNLLFV---SPSF---CKLFGQTEEKLLGKALLPVIML----PEQLATAA- 462 Query: 310 GAEIQNAQSWSATIRQ-----RDGAP--AGILQIKTSSGAETSAFIERVADISQHMAALA 362 G E Q S ++ R+ R+G L+ + + A I DI+ Sbjct: 463 GME-QMICSDTSYYREYLSPTREGKRWIGWALRCIFNQSGQAEAIIGMGRDIT------- 514 Query: 363 LEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA----VSPVVYLIGVDHIQDVI 418 +++ + IEQL DP+TGLPNR LH+ L +++A + + +D + + Sbjct: 515 -DRKTAESTIEQLAYHDPVTGLPNRTLLHDRLQLAINRAERDSQGVAILFLDLDRFKAIN 573 Query: 419 DSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV--SLENDVSNITQIADELRN 476 DSLG+A DQ L V NR + ++ + R+ G +FV++ +L+ND + + + ++ Sbjct: 574 DSLGHAMGDQLLRLVGNRLLDCVRSSDTVARLGGDEFVVLISALDNDHA-VGSVVMKILE 632 Query: 477 VVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAM 534 + +P IDD + SIGIS G++ + LL A AM ++ G N FFSP + Sbjct: 633 QLCEPYQIDDHEVYTSSSIGISLFPRDGRDAEELLKNADMAMYQAKEAGRNTCHFFSPEL 692 Query: 535 NEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRF 594 N ERL+L + ++ A+ + LVYQPQ+ +G + GIEAL RW P G VPP+ F Sbjct: 693 NMRATERLLLESTMRRALEREEFFLVYQPQMELRSGHIAGIEALLRWRHPDLGVVPPNNF 752 Query: 595 IPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAM 654 IP+AEE G I +G WV+AEACRQ W+ + ++VN+SA FR L ++ + Sbjct: 753 IPIAEETGLIVPLGEWVLAEACRQAVRWQQEGQPPLRMAVNVSARQFRQRNLGLRIEKIL 812 Query: 655 HAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPV 714 G+D L +E+TES +ME+ E ++ L+ MG+ LS+DDFGTG+S LS L P+ Sbjct: 813 METGLDPALLELELTESAVMENPEEAILTLRQLKKMGITLSIDDFGTGYSSLSHLKHFPI 872 Query: 715 TEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQ 774 +KID+SFV + + EAI ++ S+ LTVVAEG+E EQ E + + HC +Q Sbjct: 873 DRLKIDRSFVKHVTRDHNDATIAEAIIALAHSMKLTVVAEGIEHSEQMEFMHQRHCDTMQ 932 Query: 775 GYFFSRPLPAEEIPGWM 791 GY+ SRP+ AEE ++ Sbjct: 933 GYYLSRPVTAEEFGTFL 949 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 51/239 (21%), Positives = 108/239 (45%), Gaps = 25/239 (10%) Query: 24 GAVLIN-ENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKA 82 G ++I+ EN ++ N A G REE+IG + I + E G+ Sbjct: 294 GILVIDPENHRIVDVNELAASSLGRTREEMIGTSCHRFICPN-------------EEGRC 340 Query: 83 RVEGMSRELQLEKK-----DGSKIWTRFALSKVSAEGKVY----YLALVRDASVEMAQKE 133 + + +EL E++ DGS++ +S+V +G+ + ++ + R VE + KE Sbjct: 341 PITDLQQELDNEERDLIRADGSRLPVIKTVSRVVLDGREHLLESFVDISRRKQVENSLKE 400 Query: 134 QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPAD 193 + + V++ VI D +++ + +F ++FG + G ++ +PE A Sbjct: 401 SEERYRMLVENQADLVIKTDMTGNLLFVSPSFCKLFGQTEEKLLGKALLPVIMLPEQLA- 459 Query: 194 NRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER 252 ++Q++ E+L TR G++ WI ++ +++ + ++ DIT+ + Sbjct: 460 TAAGMEQMICSDTSYYREYLSPTREGKR-WIGWALRCIFNQSGQAEAIIGMGRDITDRK 517 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 298 bits (764), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 202/616 (32%), Positives = 318/616 (51%), Gaps = 54/616 (8%) Query: 216 TRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMG 275 T GE +W++ ++ +D Q +DIT+++ N L ++ F Sbjct: 485 TAAGEYLWVENHVTTSFDRKGKPQRFTGVMTDITQQK------NNELQLRQAAIVFESTR 538 Query: 276 EIIC-----RNIESVLNESHVSLFA-----LRNGMPIHWASSSHGAEI--QNAQS----- 318 E I RNI V N + + LF L P + S H Q Q+ Sbjct: 539 EGIVITDAERNIIKV-NRALIDLFGYPENELLGQRPRIFHSGKHDGHFYQQMLQALDEHG 597 Query: 319 -WSATI--RQRDGAPAGILQIKTS------SGAETSAFIERVADISQHMAALALEQEKSR 369 W + R+++G +L + TS S E +I DISQ L+ ++R Sbjct: 598 FWRGEMWNRRQNGE---LLPMMTSINPVCDSNGEILYYISIYTDISQ------LKDSEAR 648 Query: 370 QHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV----SPVVYLIGVDHIQDVIDSLGYAW 425 +E + DP+TGLPNR L LD + A+ + ++ +DH ++V DS G+ + Sbjct: 649 --LEHMALHDPLTGLPNRAMLGQKLDSALQHAMLNSTRVALLMLDLDHFKNVNDSFGHHF 706 Query: 426 ADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVS--NITQIADELRNVVSKPIM 483 D+ L +V R +++L+ +CR+ G +F ++ L+N+ S +++ +A+ + + + +P + Sbjct: 707 GDELLHQVSARLKQQLRESDVVCRLGGDEFTVL-LQNNPSPDDVSLLAERIIHALHQPFL 765 Query: 484 IDD-KPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKE 540 + + + + SIGIS + G + L+ A AM + +G +G+++FS + K Sbjct: 766 LSNAREVMIGTSIGISLYPEHGSTAEELMQQADTAMYRAKHDGRDGYRYFSEELFLKAKA 825 Query: 541 RLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEE 600 RL L L AI+ + K+ YQPQI +T ++ G EAL RW DP +G +PPS FI +AEE Sbjct: 826 RLELEQRLHRAITGQEFKVFYQPQISIKTNQIIGAEALLRWDDPEYGLIPPSEFISVAEE 885 Query: 601 IGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGID 660 G I+NIG WV+ E CRQ +W Q++ L+VNLS L + + +H G Sbjct: 886 TGLIQNIGEWVLYETCRQGRDWLDQHLPPINLAVNLSPLQLHHGDVRQLIGTILHNSGFP 945 Query: 661 GHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKID 720 H L +E+TES +ME E K +Q LR G+ +++DDFGTG+S L+ L P+ +KID Sbjct: 946 AHHLELELTESALMEQQEETVKILQGLRQQGIRIAIDDFGTGYSSLAYLKQFPLDVLKID 1005 Query: 721 KSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSR 780 K FV+ E+ + + I ++G SL LTV+AEGVETK Q E L + C QGY +S Sbjct: 1006 KRFVEDIPHERDDMEIAATIVAMGHSLRLTVLAEGVETKAQLEFLEQQGCDYYQGYLYSM 1065 Query: 781 PLPAEEIPGWMSSVLP 796 PLPAEE +S P Sbjct: 1066 PLPAEEFAQLLSQQNP 1081 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 48/211 (22%), Positives = 94/211 (44%), Gaps = 10/211 (4%) Query: 45 WGYKREEVIGNNI---DMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI 101 WGY+ ++ I + D+L P DL+ E I H K + E ++ G + Sbjct: 436 WGYQADDFINGKLTMSDLLHPEDLQRVWAEVIHHIETRHKEYI----LECRVRTAAGEYL 491 Query: 102 WTR-FALSKVSAEGK-VYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIV 159 W + +GK + ++ D + + + Q RQ I + +++ D ER+I+ Sbjct: 492 WVENHVTTSFDRKGKPQRFTGVMTDITQQKNNELQLRQAAIVFESTREGIVITDAERNII 551 Query: 160 QCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTG 219 + NRA ++FGY +E G +P + + + ++ Q L + + E + G Sbjct: 552 KVNRALIDLFGYPENELLGQRP-RIFHSGKHDGHFYQQMLQALDEHGFWRGEMWNRRQNG 610 Query: 220 EKIWIKASISPVYDVLAHLQNLVMTFSDITE 250 E + + SI+PV D + + ++DI++ Sbjct: 611 ELLPMMTSINPVCDSNGEILYYISIYTDISQ 641 >UniRef50_B8GPC4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPC4_THISH Length = 761 Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 165/451 (36%), Positives = 256/451 (56%), Gaps = 17/451 (3%) Query: 355 SQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIG 410 S+ +A E+E++++ + +L D +T LPNR + L ++ A + I Sbjct: 309 SEALAQEVREREQAQERLNELAYSDSLTHLPNRTLFQDRLHQAMEYAKRHERLIALLFID 368 Query: 411 VDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL-----ENDVS 465 +D + V DSLG+A D+ L E+ RF L+ L R+ G +F ++ E+ V+ Sbjct: 369 LDDFKRVNDSLGHAAGDRLLQEIARRFGRVLRETDTLARLGGDEFTVILTDIQRPEDAVT 428 Query: 466 NITQIADELRNVVSKPIMIDDKPFPLTLSIGISY---DLGKNRDYLLSTAHNAMDYIRKN 522 + ++ D LR P M+ ++ ++ SIGI+ D D LL A AM + Sbjct: 429 FVRKLLDTLR----APFMLGEQSITMSASIGITLYPSDDTAEAD-LLKDADTAMYQAKSR 483 Query: 523 GGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWH 582 G N + F++P + + V+ RL + L+ A+ NQ L YQP + + G+EAL RW Sbjct: 484 GKNTFDFYAPELTQSVRARLTMEGDLRAALDTNQFLLHYQPIVSLNGAGVQGLEALVRWQ 543 Query: 583 DPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFR 642 P+ G VPP FIP+AE+ G I IG WVI AC QLA+W ++ + L++NLS + FR Sbjct: 544 HPVRGLVPPDEFIPVAEDSGLIHEIGDWVIDAACAQLAQWDARGLSHLTLAINLSPVQFR 603 Query: 643 SNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTG 702 + L ++++ + I +L +EITES++ME + + + +Q L MG+GL +DDFGTG Sbjct: 604 RDGLVSRIARRLRQHSIASERLHLEITESLLMEQNRHVAETLQTLDAMGIGLCIDDFGTG 663 Query: 703 FSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQF 762 +S L+ L P+ ++K+D+SFV+ L + AL+ AI + +L L VVAEGVE K Q Sbjct: 664 YSALNYLRHFPIRQLKVDRSFVEDMLHAEDTRALVRAIVLMAHALRLEVVAEGVEEKSQL 723 Query: 763 EMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 E+LR++ C +QGY SRPLPA EIPGW+ S Sbjct: 724 ELLREMGCDQVQGYLLSRPLPAAEIPGWIES 754 >UniRef50_Q2W3S8 Predicted signal transduction protein containing a membrane domain n=4 Tax=Bacteria RepID=Q2W3S8_MAGSA Length = 548 Score = 297 bits (760), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 159/421 (37%), Positives = 241/421 (57%), Gaps = 6/421 (1%) Query: 378 FDPMTGLPNRNNLHNYLDDLVDKA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEV 433 +D +TGLPNR+ + + V +A S + +G+D V D+LG+ D+ L+EV Sbjct: 121 YDTLTGLPNRDLFGDRIGQAVLQANRTGASVALMTMGLDRFTLVNDALGHGAGDRLLMEV 180 Query: 434 VNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTL 493 R + ++ R++G +F LV D + +A++ N V +P +D + +T Sbjct: 181 ARRLKMCVRETDTAVRLDGDKFALVMAIADTDDSVIVAEKALNAVKEPFALDGQEVVVTF 240 Query: 494 SIGIS-YDLGKNRDY-LLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEA 551 SIGIS Y L + L+ A NA+ Y + +G N +QFFS MN K RL L ++ A Sbjct: 241 SIGISVYPLDADSSAQLVKHAENALHYAKVSGRNQYQFFSKDMNRKAKSRLELEGRMRRA 300 Query: 552 ISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWV 611 ++N + + YQP++ A+ + G EAL RW DP G VPP FIP+AEE G+IE IG WV Sbjct: 301 LANQEFVVFYQPKVSADRDAIVGAEALIRWMDPERGMVPPGEFIPVAEESGQIEPIGTWV 360 Query: 612 IAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITES 671 + ++C Q W+ + +SVN+SA FRS L V++ + + G+D L +EITES Sbjct: 361 LRQSCIQNRLWQEAGFNPIKVSVNVSARQFRSPSLLQTVTEVLDSTGLDPKWLELEITES 420 Query: 672 MMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEK 731 M+M ++++ LRD+G+GLS+DDFGTG+S LS L P+T +KID++F+ T Sbjct: 421 MLMNDVDTAVRKMKALRDLGIGLSIDDFGTGYSSLSYLGRFPITTLKIDRAFIADVDTNP 480 Query: 732 RILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 + + AI + + LNL VVAEG E E LR C +QG+++SRP+PA+E M Sbjct: 481 KTAEIARAIIGLSRGLNLEVVAEGAEIAEHIMFLRNNGCDTVQGFYYSRPVPADEFERMM 540 Query: 792 S 792 Sbjct: 541 G 541 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 293 bits (751), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 245/839 (29%), Positives = 398/839 (47%), Gaps = 108/839 (12%) Query: 17 ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHN 76 A+EQ+ + V+ N N E+ + NP+ ++ GY R E IG N PR L+ + Sbjct: 600 AVEQSPVAIVITNRNAEIEYVNPSFTRVTGYSRLEAIGQN-----PRILQSGEAPSDTY- 653 Query: 77 REGGKARVEGM--SRELQLEKKDGSKIWTRFALSKVSAE-GKV-YYLALVRDASVEM--- 129 R + +EG + +K+G W + +++ + + G+V +YLA+ D + + Sbjct: 654 RSLWQTLLEGKVWTGLFHNRRKNGELFWEKASIAPIIGDHGEVTHYLAVKEDVTERLRAD 713 Query: 130 ----AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 +E R+L + P+++L + + CNRA E+ GY S+A + D Sbjct: 714 KLLQESEEAFRRLF---EDAKDPLLLLK-DGSFIDCNRATLELLGYG-SKAQLLGRDAAD 768 Query: 186 NIPEFPADN---------------RIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISP 230 P D RI + W R G + ++ +++P Sbjct: 769 ISPARQPDGQASGEKAAALIAAALRIGYHRFEWTHQRAD---------GSPVPVEVTLTP 819 Query: 231 VY---DVLAHLQNLVMTFSDITEER----QIRQL----EGNILAAMCSSPPFH--EMGEI 277 + +V+ H + DI+E R ++R L E + A M S E+ + Sbjct: 820 ITLRGEVILH-----TLWRDISERRVTETRLRLLAAAFEHSAEAIMVSDRDNRILEVNDA 874 Query: 278 ICRNIESVLNESHVSLFALRNGMPIHWASSSHGAE--------IQNAQSWSATI--RQRD 327 CR +E +R P +S AE I + W + R++D Sbjct: 875 FCRLTGYAADE-------VRGSDPRLLSSGRTSAEEYRTMWQAINSTGHWQGEVWDRRKD 927 Query: 328 GAP-AGILQIKTSSGAE--TSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGL 384 G+ L I T GAE T +I DIS+ AA +EK I L FD +T L Sbjct: 928 GSYYPKWLSISTIRGAEGNTEYYIGSFVDISERKAA----EEK----ISHLAHFDTLTDL 979 Query: 385 PNRNNLHNYLDDLVDKAV------SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFR 438 PNR+NL LD + A S V + +D +++ D+LG+ D LLEV R R Sbjct: 980 PNRSNLQGRLDQALASARREGHGRSVAVMFLDLDRFKNINDTLGHHVGDALLLEVAARLR 1039 Query: 439 EKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGIS 498 ++ + R+ G +FV+V D ++A ++ +S+ I+ T SIGI+ Sbjct: 1040 SSVRDSDVVARLGGDEFVVVLTGADALAAERVAGKILKALSRAYQIEGHALHSTSSIGIA 1099 Query: 499 Y--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQ 556 G++ + L+ A AM + + G N QFF+ +MNE +R L L A+ Q Sbjct: 1100 VFPADGESVEVLMQNADAAMYHAKSAGRNNVQFFTASMNEAASDRRQLEEDLHLALQQKQ 1159 Query: 557 LKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEAC 616 L YQPQ+ A+ ++ +EAL RW P HG VPP+RF+PLAE+ G I IG+WV+ AC Sbjct: 1160 FVLHYQPQVDAQR-RVFAVEALLRWQHPHHGLVPPARFVPLAEDTGLIVPIGQWVLETAC 1218 Query: 617 RQLAEW----RSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESM 672 Q+ W R++ + + +VN+SA FR + A+ G + +L +E+TES+ Sbjct: 1219 AQIKAWSVDARTRKLQV---AVNVSARQFRQPDFVELLRQAIDNSGANPARLKLELTESL 1275 Query: 673 MMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKR 732 ++++ + ++ ++ +GV S+DDFGTG+S LS L LP+ ++KID++FV R + Sbjct: 1276 VLDNVADTIDKMNAIKLLGVTFSMDDFGTGYSSLSYLTRLPLDQLKIDRAFVCRLPENRS 1335 Query: 733 ILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 + + I ++G+SL L VVAEGVET+ Q + L C QG+ FSRPL + ++ Sbjct: 1336 DAVIAQTIVTMGRSLGLKVVAEGVETEAQRQFLDSHGCDGYQGFLFSRPLAVDAFEDFL 1394 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 93/226 (41%), Gaps = 21/226 (9%) Query: 34 VMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARV-----EGMS 88 V+ N E+++GY E+IG + + +P + G +A S Sbjct: 495 VVSCNRRLEEIFGYAPGELIGKSSQVF--------YPSIEVFEKIGARAYAVVAENRNFS 546 Query: 89 RELQLEKKDGSKIWTRFALSKVSAE----GKVYYLALVRDASVEMAQKEQTRQLIIAVDH 144 EL L +KDGS W + G ++ A D S +E++R L+ AV+ Sbjct: 547 GELTLRRKDGSLFWGALTGRAIDPSQPHAGSIWVFA---DISERREAEEESRNLLQAVEQ 603 Query: 145 LDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWK 204 +++ + I N +FT + GY EA G P +L E P+D L Q L + Sbjct: 604 SPVAIVITNRNAEIEYVNPSFTRVTGYSRLEAIGQNP-RILQSGEAPSDTYRSLWQTLLE 662 Query: 205 TARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITE 250 F + GE W KASI+P+ + + + D+TE Sbjct: 663 GKVWTGLFHNRRKNGELFWEKASIAPIIGDHGEVTHYLAVKEDVTE 708 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 292 bits (747), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 203/613 (33%), Positives = 315/613 (51%), Gaps = 36/613 (5%) Query: 199 QQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLE 258 QQ L + D + +L+ GE W++ + +D + + T DIT + +Q E Sbjct: 312 QQALLRQPYDIEHRILVN--GEIRWVREKANLDFDAHGNAVYAIGTVRDIT---RYKQEE 366 Query: 259 GNILAAMCSSPPFHEMGEIICRNIESV----LNESHVSLFALRN-----GMPIHWASSSH 309 + A + F GE I E+V +N S V++ R+ P +S H Sbjct: 367 ATLRLA---ARVFDSSGEAILITDENVRVVAVNHSFVAMSGYRSEEVMGKNPRMLSSGRH 423 Query: 310 GAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQH--------MAAL 361 AE A W + G G + K SG ++ A +H +A Sbjct: 424 DAEFYRAM-WDDI--NQHGYWQGEIWDKHKSGRIYPKWMSITAVRDEHGKVVNYISIARD 480 Query: 362 ALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV-----DKAVSPVVYLIGVDHIQD 416 EQ ++ ++I L +D +TGLPNR L + L ++ DK +++L +D + Sbjct: 481 TTEQTEAEKNIHFLAYYDVLTGLPNRTLLRDRLGQMIAVAHRDKHQFSLIFL-DLDRFKY 539 Query: 417 VIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRN 476 + DS+G++ D+ L V R ++ ++ + R+ G +F+++ E S + +A +L Sbjct: 540 INDSMGHSVGDRLLQSVALRIQDCVREGDTVARLGGDEFIVLLREAGESAASVVAQKLLI 599 Query: 477 VVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAM 534 ++ P +D + SIGIS D ++ D L+ A AM ++ G N +QFF P M Sbjct: 600 ALATPYDLDGQVISTQASIGISIYPDQAQDADTLIKNADMAMYRAKEEGRNNFQFFVPEM 659 Query: 535 NEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRF 594 N V + L+ A+ +L L YQPQ +G L G+EAL RW P+ G V P+ F Sbjct: 660 NFRVDLLFSMEKDLRLALERGELFLQYQPQADLASGTLSGVEALIRWDHPVKGQVSPAEF 719 Query: 595 IPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAM 654 IP+AEE G+I IG WV+ AC Q+AEWR +H ++VNLS R L + + Sbjct: 720 IPVAEETGQIVAIGEWVLRTACSQMAEWRKTGMHDLTIAVNLSIRQLRQPDLAELIKSVL 779 Query: 655 HAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPV 714 G+D L +EITE +MM + F+ + ++D+GV LS+DDFGTGFS L+ L +PV Sbjct: 780 LETGLDARHLELEITEGIMMGDNQAAFRFLSEMQDLGVQLSIDDFGTGFSSLNYLKQMPV 839 Query: 715 TEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQ 774 ++KID+SF+ T++ A++ +I S+G LNL V+AEGVET+EQ + LR C IQ Sbjct: 840 NKLKIDQSFIRDIETDEGDAAIIRSIISLGHRLNLRVIAEGVETQEQLDFLRIRGCDEIQ 899 Query: 775 GYFFSRPLPAEEI 787 GYF+SRPL AE+ Sbjct: 900 GYFYSRPLLAEDF 912 >UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase sensor n=1 Tax=Thauera sp. MZ1T RepID=C4KA21_THASP Length = 1093 Score = 292 bits (747), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 173/472 (36%), Positives = 255/472 (54%), Gaps = 12/472 (2%) Query: 327 DGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPN 386 D P LQ + G + R+ +Q + AL ++ I L +FDP+TGL N Sbjct: 619 DSLPMRTLQFRIE-GEHVGGRLRRIRGTAQDVTAL----REAEARIRYLARFDPLTGLLN 673 Query: 387 RNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLK 442 R+ ++ D++ A V + +D + V DSLG+A D+ L +V R ++ Sbjct: 674 RSAWQDHAQDVLRHAARHDDRCAVLFLDLDDFKTVNDSLGHAAGDRLLAQVACRLGGCVR 733 Query: 443 PDQYLCRIEGTQFV-LVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGIS-YD 500 + + RI G +FV L+S ++A+ + + +++P+ ID +P + SIGI+ Y Sbjct: 734 AEDLVARIGGDEFVILLSRLAHAEEPARVAERVLDALARPLQIDSQPLRVGASIGIALYP 793 Query: 501 L-GKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKL 559 G D LL A AM +++G N ++FF P M + V RL A L++AI + L+L Sbjct: 794 ADGGEIDTLLKHADTAMYEAKESGRNAYRFFLPEMTQRVTRRLQTEAELRKAIESGDLRL 853 Query: 560 VYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQL 619 YQPQI A +G +YG EAL RW P G +PP RF+P AE+ G I +G WV+ EAC Q Sbjct: 854 HYQPQIDAASGRVYGCEALVRWQHPERGLLPPDRFVPFAEQSGLIVPLGEWVLREACLQQ 913 Query: 620 AEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTE 679 WR + ++VN+SAL FR V+ + G D ++ +EITES +M+ E Sbjct: 914 VRWRDAGLPPLDVAVNISALQFRRRDFVATVARVLGETGADPARIELEITESALMDATPE 973 Query: 680 IFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEA 739 + L +G+ L++DDFGTG+S LS L LP+ +KID+SFVD A+ A Sbjct: 974 LVASFDQLVALGLTLALDDFGTGYSSLSYLKRLPLRRLKIDRSFVDGLPDNPEDAAITSA 1033 Query: 740 ITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 S+ + L + VVAEGVET++Q L K CR +QGY FSRPL EE W Sbjct: 1034 TLSLARDLGMEVVAEGVETEDQRGYLCKRGCRAMQGYLFSRPLGVEEFGTWF 1085 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 168/436 (38%), Positives = 242/436 (55%), Gaps = 9/436 (2%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV----SPVVYLIGVDHIQDVID 419 E++ + I+ L DP+TGL NR +L LD + A + V + +D + + D Sbjct: 772 ERKLAEAQIKHLAYHDPLTGLSNRFSLQTQLDQTLALARREQRTLAVVFLDLDRFKSIND 831 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVV 478 SLG+A DQ L+EV R R+ ++ + R+ G +FV+V E D + ++AD+L + Sbjct: 832 SLGHALGDQLLVEVARRLRDNVRDSDIVARLGGDEFVVVLTEVGDAAGAARVADKLLGAL 891 Query: 479 SKPIMIDDKPFPLTLSIGIS---YDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMN 535 I T SIGIS +D G + D L+ A AM + + G + QFF+P MN Sbjct: 892 VPRYRIGGHALHTTASIGISLYPHD-GDDADALMKNADTAMYHAKSQGRDNVQFFTPEMN 950 Query: 536 EMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFI 595 + V +RL L+ A+ Q +L YQPQI + +G + +EAL RW P G V P+ FI Sbjct: 951 QSVLKRLQFDHDLRVAVEAGQFELHYQPQINSTSGRVVKVEALVRWQHPREGLVSPAEFI 1010 Query: 596 PLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMH 655 P+AEE G I +G WV+ EACRQL WR I ++VNLSA S L V+ + Sbjct: 1011 PIAEETGLILPLGEWVLNEACRQLRLWRDAGITDLTVAVNLSAHQLHSPALIPMVARTLG 1070 Query: 656 AWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVT 715 G++G L +EITES+ M T ++Q LRD+G+ LS+DDFGTG+S LS L LP+ Sbjct: 1071 NHGLEGADLCLEITESVAMRDTTASIAQLQALRDLGIHLSIDDFGTGYSSLSYLKLLPID 1130 Query: 716 EIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQG 775 +K+D+SFV +A+ A ++ SL L VVAEG+ET+ Q +L C +QG Sbjct: 1131 TLKLDQSFVCEIEFNPSDVAICAATIALAHSLGLEVVAEGIETETQRRLLASHRCDFMQG 1190 Query: 776 YFFSRPLPAEEIPGWM 791 Y FS PLPAE ++ Sbjct: 1191 YLFSAPLPAERALAYI 1206 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 5/140 (3%) Query: 122 VRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 V+D + Q++ R +H +++ D RHI+ N AFT + GY + + G +P Sbjct: 645 VQDITARKKQEDALRLYASIFEHSGEAILIADQARHIIAVNPAFTNLTGYALDDIRGEEP 704 Query: 182 DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNL 241 T+L + ++ L +T Q E + + G ++S V D L + Sbjct: 705 -TILAGGQASEESYRSTWASLEQTGYWQGEIIDRRKDGTLYPKWMAVSVVRDADGVLTHY 763 Query: 242 VMTFSDITE----ERQIRQL 257 V +F+DITE E QI+ L Sbjct: 764 VASFTDITERKLAEAQIKHL 783 >UniRef50_C8QI00 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Enterobacteriaceae RepID=C8QI00_9ENTR Length = 949 Score = 290 bits (743), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 228/801 (28%), Positives = 366/801 (45%), Gaps = 51/801 (6%) Query: 27 LINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEG 86 +++ + V +N A++ GY EE++G + R H I G + Sbjct: 151 MLDLDGNVENWNAGAQRAKGYVAEEIVGQHFSRFYSAQDRLNH---IPEKNLGIAFKTGR 207 Query: 87 MSRELQLEKKDGSKIWTRFALSKVSAE-GK-VYYLALVRDASVEMA----QKEQTRQLII 140 E +KDGS W + + + GK + Y + RD + + A Q+EQ + + Sbjct: 208 FEDEGWRYRKDGSAFWAHVIIDAIRDDTGKLIGYAKITRDCTEQQALLRAQREQEKTFRL 267 Query: 141 AVDHL-DRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQ 199 V + D + +LD + +V N GY E G E + Sbjct: 268 LVTGVRDYAIYMLDVQGRVVNWNAGAQRAKGYRSEEIVGQHFSVFYGAQERQSKAPDANL 327 Query: 200 QLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQ--L 257 + KT R +DE + G W I +++ L D+TE R+ Q L Sbjct: 328 GIALKTGRFEDEGWRYRKDGSAFWAHVVIDAIHNEEGRLIGFAKITRDVTERREHEQQLL 387 Query: 258 EGNILAAMCSSPPFHEMGEII---------CRNIESVL-------NESHVSLFALRNGMP 301 LA S E+ + + C +E + N+ LF + + Sbjct: 388 RARDLAE-AQSAKASELSKFLDTIITHIPSCVIVEDAITREILMVNDKAEQLFGINKLLI 446 Query: 302 IH-WASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAE----TSAFIERVADISQ 356 +H AE+ + + A I R Q+ ++G E T A D+ Q Sbjct: 447 MHKRPHECMSAELSDYFNSLADIALRSEGIHTREQLLLTAGGERILHTRATTIAGKDLRQ 506 Query: 357 HMAALALE----QEKSRQHIEQLIQFDPMTGLPNR----NNLHNYLDDLVDKAVSPVVYL 408 + L +E Q ++ I + D +T LPNR L L Sbjct: 507 NFVMLIVEDVTDQREADARIHHMAHHDNLTSLPNRILFRQKLSEALRADTQGGYITATLC 566 Query: 409 IGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN--DVSN 466 + +D+ ++V D+LG+ D L V R R L+ L RI G +F +V L N + Sbjct: 567 LDLDNFKNVNDALGHQIGDDLLRTVAKRLRNVLRDHDTLARIGGDEFAIV-LPNIRNADE 625 Query: 467 ITQIADELRNVVSKPIMIDDKPFPLTLSIGI--SYDLGKNRDYLLSTAHNAMDYIRKNGG 524 +A L + P+ ++ + LS+GI S +++L A A+ ++NG Sbjct: 626 AAVVAQRLIEAIRPPVNLEGHNLSVGLSVGIALSSQAANTPEHMLRCADMALYEAKRNGR 685 Query: 525 NGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDP 584 N ++ F+ M+++ + R V+ L++AIS QLKL YQP + G EAL RWH P Sbjct: 686 NRYEHFTLEMDDLARSRRVIENDLRDAISGRQLKLYYQPITDGNEKGIIGYEALMRWHHP 745 Query: 585 LHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSN 644 + G + P+ FIP+AEE G I +G + + EACR+ A W + ++SVNLS L F+++ Sbjct: 746 IKGLIMPNDFIPIAEETGLIHLLGAYALYEACREAASWEGEQ----SVSVNLSPLQFKNS 801 Query: 645 QLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFS 704 L + V A+ G+ H+L VEITES++++ + +Q L+ +GV +++DDFGTG+S Sbjct: 802 SLISVVEGALRESGLAPHRLEVEITESVLLDDALGNIRTLQNLKALGVQIALDDFGTGYS 861 Query: 705 GLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEM 764 LS L S P +IKIDKSF++ + LA++ AIT + +SL++ + AEGVE+ EQF Sbjct: 862 SLSYLRSFPFDKIKIDKSFINDMGDSREALAIIRAITGMSRSLDIQITAEGVESSEQFAR 921 Query: 765 LRKIHCRVIQGYFFSRPLPAE 785 LR+ C + QGY F RP P+E Sbjct: 922 LREEGCTLFQGYLFGRPQPSE 942 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 290 bits (742), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 167/467 (35%), Positives = 264/467 (56%), Gaps = 29/467 (6%) Query: 338 TSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDL 397 T+S E +I DI++H + SR IE L D +TGLPNR L+D Sbjct: 329 TNSRGEPEHYIAIFNDITEH--------KNSRAQIEFLAHHDALTGLPNRI----LLNDR 376 Query: 398 VDKAVSPV--------VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCR 449 ++ A++ V + I +D ++V DSLG+ DQ L E R ++ + R Sbjct: 377 LEMAITQVRRQGEKLGILFIDLDRFKNVNDSLGHGVGDQILQEAAKRLTANVRTGDTVSR 436 Query: 450 IEGTQFVL----VSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGK 503 + G +FV+ V E +++++T +LR + P +D +T SIGI+ D G+ Sbjct: 437 LGGDEFVVLFPRVRTEGNLADLTI---KLREQLQLPYTVDGISLHITPSIGIAVYPDDGE 493 Query: 504 NRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQP 563 + + L+ A AM ++ G N +QF++P +N +RL L + L+ AI +L YQP Sbjct: 494 DPNTLIKNADAAMYLAKEKGRNNYQFYTPTLNAKTLDRLKLESDLRSAIDAGDFELHYQP 553 Query: 564 QIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWR 623 QI +G+L+G+EAL RW G + P+ FIPLAEE G I +G WV+ +A +QLAEWR Sbjct: 554 QIIGSSGQLWGLEALIRWRHRERGLISPAEFIPLAEETGLIVGLGDWVLVQAVKQLAEWR 613 Query: 624 SQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKR 683 Q + +SVN+SAL FR ++V + + + +E+TE+M+M+ + Sbjct: 614 RQGHNHLVVSVNISALQFRQGDFLDRVKHILQEAQLVPDAIELELTETMLMQDVQSAIQT 673 Query: 684 IQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSI 743 ++ LR++G +++DDFGTGFS L+ L LP+ +KID+SFV L E LA++E+I ++ Sbjct: 674 LKGLRELGFRIAIDDFGTGFSSLNYLRHLPINVLKIDQSFVREMLQEPESLAIVESIIAL 733 Query: 744 GQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 Q+L +AEGVET+ +F++L+ CR++QGYFF+RP+P W Sbjct: 734 AQALGKETIAEGVETRAEFDVLQARGCRLMQGYFFARPMPPVIFDQW 780 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 289 bits (740), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 167/440 (37%), Positives = 256/440 (58%), Gaps = 13/440 (2%) Query: 369 RQHIEQLIQF----DPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDS 420 R+ E+ +QF DP+T LPNR+ L L+D + + S V + +D + + DS Sbjct: 636 RKQAEERLQFLANHDPLTRLPNRSWLIACLEDRIQQIASSGQQVAVMFLDLDRFKLINDS 695 Query: 421 LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLENDVSNITQIADELRNVVS 479 G+ D+ L E +R + + + R+ G +F +LVS + ++ +A+++ V++ Sbjct: 696 FGHQTGDELLRETASRLEQVVGGRGQIARLGGDEFTLLVSHFASQATLSTLAEDILAVLA 755 Query: 480 KPIMIDDKPFPLTLSIGIS---YDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNE 536 +P+ ++ + +T S+GIS +D G + LL A AM ++ G N +QFF+ MN Sbjct: 756 QPLWLEGQELIVTGSLGISVYPHD-GSDARTLLKNADVAMYRAKEAGKNTYQFFAAEMNA 814 Query: 537 MVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIP 596 ERL L L++A+ + +L +QP + A T L +E L RW P G V P RFIP Sbjct: 815 QAIERLQLERGLRQALERGEFELHFQPIVAAATYRLEALEVLLRWRHPELGLVSPVRFIP 874 Query: 597 LAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHA 656 LAEE G I IG WVI +ACRQLAEW +H+P L++NLSA F L QV+ A+ Sbjct: 875 LAEETGLIRPIGDWVIRQACRQLAEWDCLGLHVPRLAINLSARQFEQQGLIMQVAGALAE 934 Query: 657 WGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTE 716 GI +L +E+TESM+M++ +E + L+ +GV LS+DDFGTG+S LS L P+ Sbjct: 935 AGIAAGRLELEMTESMVMQNPSEAVSLLGELKALGVRLSIDDFGTGYSSLSYLKRFPLDT 994 Query: 717 IKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGY 776 +KID+SF++ + A+ EAI ++ + L+ +VVAEGVET+ Q L C+++QGY Sbjct: 995 LKIDRSFIEGLPGDGDNAAIAEAILAMARKLSFSVVAEGVETEAQAAFLCAKGCQLLQGY 1054 Query: 777 FFSRPLPAEEIPGWMSSVLP 796 FSRPLPA E+P ++ P Sbjct: 1055 LFSRPLPAAELPAFLQQRSP 1074 Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust. Identities = 60/256 (23%), Positives = 111/256 (43%), Gaps = 24/256 (9%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A A+ + +EQ+++G + I +++ + + N ++ GY EE+ G I+ ++ Sbjct: 399 AKQEAENRYHALIEQSLVG-IYILQDECLAYVNDKLAEMLGYPGEELQGERIETVL---- 453 Query: 66 RPAHPEYIRHNREGGKARVEGMS---RELQLEKKDGSKIWTRFALSKVSAEGKVYYLALV 122 AH E R ++ + E +S +L +KDG + G+ + +V Sbjct: 454 --AHEERQRLRQQITQRLSENISIMHFSARLVRKDGQLLDVEIHSRLFEYRGRSAIIGVV 511 Query: 123 RDASVEMAQKEQTRQLIIAV-DHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 D S + Q + ++L V ++ +++ + I+ N+AFT + GY P Sbjct: 512 VDIS-DRVQADANQKLASKVFENAAEGILITGADYRIIAVNQAFTRITGY--------PP 562 Query: 182 DTLLN-IPEFPADNRIRLQQLLWKTARD---QDEFLLLTRTGEKIWIKASISPVYDVLAH 237 + ++ + DN +L AR Q E L R+ E + SIS V D Sbjct: 563 ELVIGRVSRIFRDNTSWSVAMLDGLARHGHWQGEMLDRRRSHEWYPAELSISAVRDDAGA 622 Query: 238 LQNLVMTFSDITEERQ 253 + N V F+DIT +Q Sbjct: 623 ITNYVGVFADITVRKQ 638 >UniRef50_Q21WZ6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=Q21WZ6_RHOFD Length = 1355 Score = 288 bits (738), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 197/569 (34%), Positives = 292/569 (51%), Gaps = 53/569 (9%) Query: 231 VYDVLAHLQNLVMTFSDITEERQIRQLEGN--ILAAMCSSPPFHEMGEIICRNIESVLNE 288 V D H+ + FS+IT Q L N IL + SP F+ ++ + L Sbjct: 541 VTDARGHIIMVNRAFSEITGYTQAEVLGQNPRILKSERQSPEFY-------LDMWTALTT 593 Query: 289 SHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAP----AGILQIKTSSGAET 344 S HWA + W+ R++DG I ++ S G T Sbjct: 594 SG------------HWA----------GEMWN---RKKDGTVYPEWMAISALRDSQGL-T 627 Query: 345 SAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLD---DLVDKA 401 + ++ +D+S AA +SR I+ L QFD +TGLPNR L + +V +A Sbjct: 628 THYVASFSDLSTAKAA------ESR--IQWLSQFDTLTGLPNRTLLQDRTALALSMVQRA 679 Query: 402 VSPV-VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL 460 P+ + L+ +DH V D+LG+ D+ L+E+ R + ++ + R+ G +FVLV Sbjct: 680 REPLTMLLVAIDHFGAVNDTLGHQLGDELLVEMARRLSDSVREQDTVSRMGGKEFVLVLP 739 Query: 461 ENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDY 518 +A EL +S+P + LT SIGI+ D G + D L AM Sbjct: 740 GTPAMGAAHLATELLWKLSRPCSLGMHELTLTASIGIASFPDNGADFDTLFKAVEIAMHR 799 Query: 519 IRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEAL 578 + G + +QF+S M E V L AL++AI +QL+LVYQPQ+ +TG++ G+EAL Sbjct: 800 AQLKGRDTYQFYSDDMYEQVLAHDRLIKALRQAIVLDQLQLVYQPQVDLQTGQICGVEAL 859 Query: 579 ARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSA 638 RW P G V P +FIPLAEE G I IG WV+ AC+ + W I +P +++N S Sbjct: 860 LRWQHPELGAVSPGQFIPLAEESGLIIGIGEWVLRRACQDIRRWLDHGIKVPHVAINASP 919 Query: 639 LHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDD 698 L FR N L QV A+ ID + +E+TES +M+ ++ L+D+G+ LS+DD Sbjct: 920 LQFRDNNLVLQVKAALTESQIDPALIYIEVTESALMDDVPRNEAMLKALKDLGIKLSLDD 979 Query: 699 FGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVET 758 FGTG+S LS L P ++KID+SFV T + L++ I S+ L + V+AEGVET Sbjct: 980 FGTGYSSLSYLKRFPFDQVKIDQSFVRDIATSQSDSLLVKVIVSMAHGLGMKVIAEGVET 1039 Query: 759 KEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 + Q E++R C IQGYFF +P+ A+ I Sbjct: 1040 EAQCEIMRTSICDEIQGYFFCKPISAQAI 1068 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 51/195 (26%), Positives = 82/195 (42%), Gaps = 19/195 (9%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 ADNA+D I+ L+ + +P+ EKL G+ EV+ + + Sbjct: 404 ADNASDVIWTMDLKGRFT------------YVSPSVEKLRGFTSAEVMQQTLAQTLCPSS 451 Query: 66 RPAHPEYIRHNREGGKARVE--GMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLAL 121 P E + + A + G EL+ KDGS +WT + + + E V + + Sbjct: 452 IPVATEALGKSMASMAAGLPFIGFRGELEQPCKDGSTVWTEISTNGMRNEQGDFVGIVGV 511 Query: 122 VRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 R+ + AQ++Q + + V D HI+ NRAF+E+ GY +E G P Sbjct: 512 SRNITERKAQQQQLQLAAQVFAQGREGITVTDARGHIIMVNRAFSEITGYTQAEVLGQNP 571 Query: 182 DTLLN---IPEFPAD 193 L + PEF D Sbjct: 572 RILKSERQSPEFYLD 586 >UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SP12_9RHIZ Length = 894 Score = 288 bits (738), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 214/710 (30%), Positives = 343/710 (48%), Gaps = 73/710 (10%) Query: 151 VLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQL-LWKTAR-- 207 V D E + NRA G + D L+ PE + + R +L + +T + Sbjct: 188 VKDSESRFIVANRALAADSGRETTRDMIGLTDFDLHAPELAS--KFRADELSVLQTGQPM 245 Query: 208 -DQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT---EERQIRQLEGNILA 263 D++EF++ R+G W+ ++ P+ + + LV DIT E +R + IL Sbjct: 246 IDEEEFVV-DRSGAGKWLSSTKVPLRNDRNDVFGLVGIAHDITGRKREDMLRTGQAEILE 304 Query: 264 AMCSSPPFHEMGEIICRNIESVLNESHVSLFAL-RNGMPI-HWASSSHGAEIQNA----- 316 + + P ++ + + R +ES L S+ L + G + H A+ S NA Sbjct: 305 MIATGAPLDDVLDRLMRLMESQLTGILGSVLLLDKEGRHLRHGAAPSLAEGYINAIDGVA 364 Query: 317 ------------------------------------------QSWSATIRQRDGAPAGIL 334 WS I GA G+ Sbjct: 365 IGPKVGSCGTAVFRREPVVVADIMRDPLWDDYRDLAERYGYRSCWSTPIVSHQGAVLGVF 424 Query: 335 QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYL 394 + + + E + R+ + + +A +A+E++K+ I + D +TGLPNR L + L Sbjct: 425 AMYSMTVREPAEAETRLINFTTRIAGIAIERKKAEDQIHFMANHDVLTGLPNRALLQDRL 484 Query: 395 DDLV------DKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLC 448 + D+ VS V I +D+ + + D+LG+ D+ L V R + + Sbjct: 485 SQAILHAQRYDRWVS--VVFIDLDNFKLINDTLGHNAGDRLLKTVAERMVGCISSTDTIV 542 Query: 449 RIEGTQFVLVSLENDVSNITQIAD---ELRNVVSKPIMIDDKPFPLTLSIGISY--DLGK 503 R+ G +FVLV L + N+ IA+ +LR +++P+ + D T SIGI+ GK Sbjct: 543 RLGGDEFVLV-LSDQPKNVDLIAETLQKLRTAIAEPLQLGDHCVRATASIGIATYPKDGK 601 Query: 504 NRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQP 563 + L++ A AM + G + +QF++P N ER +L L+ A++ +Q +L YQP Sbjct: 602 APESLVANADAAMYRAKAVGRDNFQFYAPEFNTRAHERFLLQEELRTALARSQFELFYQP 661 Query: 564 QIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWR 623 QI + ++ +EAL RW+ P HG + P FIP AEE G I IG WV+ EACRQ W+ Sbjct: 662 QIDLRSVQIVAVEALIRWNHPAHGAMAPVGFIPTAEETGLIVPIGDWVLHEACRQNKAWQ 721 Query: 624 SQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKR 683 + +SVN+SA F L +V A+ ++G L +E+TES++M+ Sbjct: 722 DLGLEPITVSVNVSARQFSEKNLVERVVHALSESDLEGCYLELELTESLIMQDVGLAVTT 781 Query: 684 IQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSI 743 + L+ +GV +S+DDFGTG+S LS L + P+ +KIDKSF+D T + A+ A+ S+ Sbjct: 782 MNKLQSLGVQISIDDFGTGYSSLSALKTFPIARLKIDKSFIDDVATNEDDQAVASAVISL 841 Query: 744 GQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 GQ L + V+AEGVET EQ LRK +C +QGY FS+P+ + EI + S Sbjct: 842 GQKLKMRVIAEGVETDEQVAFLRKNNCDEMQGYHFSKPVCSREIERLLES 891 >UniRef50_A1SZV0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZV0_PSYIN Length = 711 Score = 288 bits (737), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 174/506 (34%), Positives = 265/506 (52%), Gaps = 26/506 (5%) Query: 309 HGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKS 368 HGA+ + W+ ++ Q DG+ ++ AE A + E ++ Sbjct: 204 HGAKEEQRGGWNHSLNQADGS-----RLNVQHQAEVFYDENGAAKVVSGTVVDVTELTQA 258 Query: 369 RQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYA 424 + I QL FD +TGL NRN ++ +++A V + +D+ + + D+LG++ Sbjct: 259 QDQILQLAHFDSLTGLANRNAFRKRVELAMERAKQYGHLGAVLFLDLDNFKRINDTLGHS 318 Query: 425 WADQALLEVVNRFREKLKPDQYLC--------------RIEGTQF-VLVSLENDVSNITQ 469 DQ L EV R + ++ +C R+ G +F VL+ + + Sbjct: 319 IGDQLLQEVARRLTDIVRGSDSICGTNFNHAIDDNLISRLGGDEFTVLLPEIGKIKDAEH 378 Query: 470 IADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGW 527 A + N + I + +T SIGI+ G+N D LL A AM Y+++ G N + Sbjct: 379 AARRVLNSIGDIINLSGHDIVVTPSIGIAIFPHHGENVDSLLKNADAAMYYVKRAGKNDY 438 Query: 528 QFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHG 587 + F +MN + K RL L + L+ AI N +L + YQPQI TG + G EAL RW+ G Sbjct: 439 ELFVNSMNVVAKRRLELESFLRHAIDNKELSVNYQPQIDIPTGRIIGAEALLRWNSAELG 498 Query: 588 HVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLP 647 V P FIP+AEE G I IG WV+ EACRQ+ EWR + ++VN+S F L Sbjct: 499 MVSPVEFIPIAEETGLISPIGEWVLREACRQVKEWRDDGLPEIQIAVNISVQQFAKQSLD 558 Query: 648 NQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLS 707 VS + G+ H L +EITE+M+M+ + + L+D+G+ L++DDFGTG+S LS Sbjct: 559 KLVSKVLLETGLPVHCLELEITENMLMDDVEGAVETLHKLKDLGINLAIDDFGTGYSSLS 618 Query: 708 RLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRK 767 L P+ ++KID+SF+ TE A+ +AI S+ +L LTV+AEGVE Q E LR+ Sbjct: 619 YLKRFPIDKLKIDRSFITYVTTEPSDAAVTQAIISMAHNLGLTVIAEGVEEASQLEFLRQ 678 Query: 768 IHCRVIQGYFFSRPLPAEEIPGWMSS 793 HC +QGY+FSRPL A ++ + S Sbjct: 679 HHCEEMQGYYFSRPLIASDMEALLRS 704 >UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax=cellular organisms RepID=Q607T2_METCA Length = 1346 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 189/603 (31%), Positives = 302/603 (50%), Gaps = 32/603 (5%) Query: 211 EFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQ---LEGNILAAMCS 267 E+ L R GE I +P +D + + DI++ ++ + L G + A+ Sbjct: 737 EYRLRRRDGEYRTILGKATPRFDAGGEFIGYIGSCIDISDRKKGDESLLLAGKVFEAVRE 796 Query: 268 SPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQ--------SW 319 S + +I + + + S P S HG E A SW Sbjct: 797 SIIVTDANRVIVAVNPAFSDMTGYSPEEAVGRTPAFLQSGRHGKEYYAAMWRAVDQEGSW 856 Query: 320 SATI--RQRDGAPAGILQIKTSSGAETSAFIERV---ADISQHMAALALEQEKSRQHIEQ 374 R+++G +L+ + ET A + + ADIS +++ +HI Sbjct: 857 QGEFWNRRKNGELFAVLETIVTVRDETGAMVNYIGVAADISS--------LKEAEEHIHH 908 Query: 375 LIQFDPMTGLPNRNNL---HNYLDDLVDKAVSPV-VYLIGVDHIQDVIDSLGYAWADQAL 430 L +DP++ LPNR L Y L ++ + V + VDH +DV DSLG+ D+ L Sbjct: 909 LAYYDPLSALPNRRYLMERAEYALALAERRKEELAVVFLDVDHFKDVNDSLGHQVGDELL 968 Query: 431 LEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFP 490 + V + +E + + R+ G +F L+ + ++Q+AD++ + KP + F Sbjct: 969 VRVATQIKEFTRETDTVARLGGDEFALLLPDLGRDAVSQVADKILAALRKPFEHSGQTFA 1028 Query: 491 LTLSIGIS---YDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAA 547 +T SIGIS +D G + + LL A AM + ++ G N ++F+ P MN + RL + + Sbjct: 1029 VTGSIGISLYPHD-GTDFETLLRNADTAMYHAKQQGRNQFRFYDPGMNVDILARLTVLSE 1087 Query: 548 LKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENI 607 L+EAI +L+ +QP+I G L G EAL RW P G + P +FIP+AE I I Sbjct: 1088 LREAIPAGELRTFFQPEIDLANGTLVGAEALVRWQHPTRGLLSPDQFIPVAESNDLIIAI 1147 Query: 608 GRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVE 667 WV+ + CR LA+W+ + + VNL+A HFR +L +V + +G+ G L +E Sbjct: 1148 SDWVLEDTCRHLAQWKKADQAPITVGVNLAARHFRDPRLVPRVKSLLCRYGVPGSSLQLE 1207 Query: 668 ITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRC 727 +TES +++ D + +Q L +G LS+DDFGTG+S LS L +LP+ +KID+SFV Sbjct: 1208 LTESTLLDADAQTMIVLQELIALGCSLSIDDFGTGYSSLSYLKNLPIATLKIDQSFVRDI 1267 Query: 728 LTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 + + + ++G SL L V+AEGVET+EQ +L + C QGY FSRPL ++E Sbjct: 1268 AFDADDRTISGTVVALGHSLGLKVIAEGVETEEQRRILLEQGCDFGQGYLFSRPLSSKEF 1327 Query: 788 PGW 790 W Sbjct: 1328 IKW 1330 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 287 bits (734), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 164/452 (36%), Positives = 254/452 (56%), Gaps = 9/452 (1%) Query: 345 SAFIERVADISQHMAAL--ALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA- 401 SA + + IS ++A E++K + I L +D +TGLPNR L + ++ A Sbjct: 477 SALRDETSQISHYVAVFLDITERKKEEERINYLANYDVLTGLPNRYLLSDRIEQAFSSAQ 536 Query: 402 ---VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV 458 V I +D+ +++ DSLG+ D L V R + L+ + R+ G +FV + Sbjct: 537 RNNFKVAVLFIDLDYFKNINDSLGHDIGDALLKLVAARLKTCLRRSDTIARLGGDEFVAL 596 Query: 459 SLENDVSN-ITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNA 515 E D S + +A+++ +++ + + +T SIGI D G+ LL A A Sbjct: 597 LSELDSSEEVIFVAEKMIESLTEKFTLGEYQLSITPSIGICIYPDDGETSVELLRNADLA 656 Query: 516 MDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGI 575 M + +G N ++F+SP MN ERL L L+ AI QL + YQP++ +G++ G+ Sbjct: 657 MYQAKDDGRNNFKFYSPDMNRKALERLKLETFLRVAIVQQQLSVYYQPKVSVLSGKMTGM 716 Query: 576 EALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVN 635 EAL RW P G + P+ FIP+AEE G I IG WV+ ++C Q W++Q I ++VN Sbjct: 717 EALLRWQHPELGFISPAVFIPIAEETGLINEIGDWVLRQSCLQARLWQAQGYDIVPIAVN 776 Query: 636 LSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLS 695 LSA + + +V + G+D H L +EITESM+M + ++ LRD GV L+ Sbjct: 777 LSARQLKQDNFAARVVTILREAGLDAHYLVLEITESMLMSTGESGLQILEQLRDDGVRLA 836 Query: 696 VDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEG 755 +DDFGTG+S LSRL +LP+ +KID+SFV +T+ +++ A + +LNL V AEG Sbjct: 837 LDDFGTGYSSLSRLKNLPLDSLKIDQSFVRDIVTDPNDASIVSATAVLAHALNLKVTAEG 896 Query: 756 VETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 VET+EQ + +R ++C QGY FSRP+PA E+ Sbjct: 897 VETQEQLDFIRMLNCEEYQGYLFSRPIPASEV 928 Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 18/155 (11%) Query: 112 AEGKVYYLA-----LVRDASVEMAQKEQTRQ-LIIAVDHLD---RPVIVLDPERHIVQCN 162 EG+V +L+ +V + + E+ Q+++ Q L ++ + +++ D E++IV N Sbjct: 352 GEGEVAHLSTAIHDMVVNLTHEIKQRKEAEQGLRLSAKVFESNTEAIMITDAEQNIVMVN 411 Query: 163 RAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQD----EFLLLTRT 218 +AFT++ GY E G +P L + P + W R D E + Sbjct: 412 QAFTQITGYGADEVLGQRPKLLSSGRHGP-----EFYEAFWHALRANDLWRGEIWNKRKN 466 Query: 219 GEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQ 253 GE +IS + D + + + V F DITE ++ Sbjct: 467 GEIFPEWVTISALRDETSQISHYVAVFLDITERKK 501 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 179/528 (33%), Positives = 277/528 (52%), Gaps = 24/528 (4%) Query: 276 EIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSAT---IRQRDGAPAG 332 E+I IE +L +V+ +R M +H A G + ++ +S + +RDG Sbjct: 476 ELIDAPIERLLKPEYVA--EMRERMALHLAEFHVGK--RKSEDYSVEEVELGRRDGGTVW 531 Query: 333 ILQIKTSSGAETSAFIERVA---DISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNN 389 + T S +E A DIS+ AA A I++L +D +TGLPNR+ Sbjct: 532 AEVVTTLGLNRRSGRVEFRAVARDISERRAAEA--------EIQRLAHYDQLTGLPNRSL 583 Query: 390 LHN---YLDDLVDKAVSPV-VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQ 445 + + Y L + + V +DH +++ D+LG+ + D+ L+EV R L+ Sbjct: 584 VKDRFRYAASLTQRRRGQLAVMFFDLDHFKNINDTLGHDFGDRLLVEVARRLESVLRGGD 643 Query: 446 YLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGK 503 +CR+ G +FV + + D ++A +L V++P+++D + +T SIGI+ D G Sbjct: 644 TVCRLGGDEFVFLLPDTDAEGAARVAAKLLEAVAQPLVLDHQELTVTPSIGIAMYPDDGT 703 Query: 504 NRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQP 563 + D L A AM ++ G NG++FF+ AM L+L AL+ A+ Q L YQP Sbjct: 704 DFDTLSRNADAAMYQAKREGRNGFRFFTEAMQARSTRTLLLANALRHALDRGQFSLHYQP 763 Query: 564 QIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWR 623 Q+ G + G EAL RW P G V P F+P+AE G I IG WV+ EA Q W Sbjct: 764 QVSLADGRVVGAEALLRWTHPEFGPVSPGEFVPIAESNGLIAQIGEWVLREAVAQSRRWL 823 Query: 624 SQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKR 683 + + ++VNLSA FR+ LP VS + G+ HQ+ +E+TE++ M+ + Sbjct: 824 DEGLPPLVMAVNLSAAQFRNPNLPELVSQVIEEAGLPPHQVELELTEAVAMDDPQSAVRV 883 Query: 684 IQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSI 743 + L G+ +S+DDFGTG+S L L V ++KID+SFV + A++ AI + Sbjct: 884 MDALFARGIRMSIDDFGTGYSSLGYLKRFKVGKLKIDQSFVRDIGDDPDDKAIVSAIIHL 943 Query: 744 GQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 SL + VAEGVET +Q + LR+ C +QGY+FSRPLPAE G++ Sbjct: 944 AGSLGMLTVAEGVETLDQLDFLRQQGCDTVQGYYFSRPLPAEAFVGYL 991 >UniRef50_C1DPF7 Intracellular signalling protein with diguanylate cyclase and phosphodiesterase activities n=1 Tax=Azotobacter vinelandii DJ RepID=C1DPF7_AZOVD Length = 586 Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 174/486 (35%), Positives = 253/486 (52%), Gaps = 10/486 (2%) Query: 317 QSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLI 376 +S IR G I+QI +T ER Q L LE+E+S I QL Sbjct: 103 ESTYVPIRDDAGRLKRIVQIAIDVSVQT----EREEVARQRCRQLMLEREESHDRIRQLA 158 Query: 377 QFDPMTGLPNRNNLHNYLDDLVDKA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLE 432 +DP+T LPNR L D + +A + V +D + + D+LG+ D L Sbjct: 159 FYDPLTDLPNRGLLLIQADQAIARARRERTALNVLFFDLDRFKLINDTLGHPAGDLMLRT 218 Query: 433 VVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLT 492 + R R +L+ + R+ G +FV+V + D+ T+ ++ +S I + Sbjct: 219 IAQRLRSELRTTDIVGRLAGDEFVVVLADCDLRQTTETIRRIQKQLSASCQIAGATLAPS 278 Query: 493 LSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKE 550 SIGIS D G++ + LL A AM + G + FFS MN +ER L L+E Sbjct: 279 ASIGISRFPDDGEDMETLLYYADLAMYQAKSKGRGQFSFFSEEMNRQAQERRTLETDLRE 338 Query: 551 AISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRW 610 A+ QL+L YQPQI +G L GIEALARW P G++PPSRF+PLAEE G + RW Sbjct: 339 ALRRRQLQLHYQPQIDLSSGRLCGIEALARWFHPQLGNIPPSRFVPLAEECGLAGELDRW 398 Query: 611 VIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITE 670 + EACRQLA WR + +SVNLS L +LP +++D + + L +EIT+ Sbjct: 399 ALEEACRQLAAWREAGLEPVTVSVNLSPLSIHDTELPARIADILRRHALAPAALNLEITQ 458 Query: 671 SMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTE 730 + + K + ++ MG+GL+VDDFGTG S L L LP+ +K+D+SFV + Sbjct: 459 EALHGGNPGTLKTLHAVQAMGIGLTVDDFGTGQSCLGYLRHLPIRALKLDRSFVRDLEHD 518 Query: 731 KRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 + AL E IG SL + V AEGVE +EQ +L +V+QG+ S+PL A+++ W Sbjct: 519 EATRALTEVAMHIGDSLRIAVFAEGVENEEQRRLLTNRGYQVVQGFLLSQPLSADQLSEW 578 Query: 791 MSSVLP 796 ++ P Sbjct: 579 LARRWP 584 >UniRef50_C6E011 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=C6E011_GEOSM Length = 869 Score = 285 bits (730), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 163/437 (37%), Positives = 248/437 (56%), Gaps = 7/437 (1%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA----VSPVVYLIGVDHIQDVID 419 EQE + Q IE L +D +T LPNR +L L ++ A V I +D +++ D Sbjct: 424 EQELNEQRIEYLAHYDTVTKLPNRFSLMARLGQALELAKRFSSRLAVIFIDLDRFKNIND 483 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV-SLENDVSNITQIADELRNVV 478 SLG+ D+ L +V R ++ ++ + R+ G +FV+V L N + +++ + Sbjct: 484 SLGHHIGDRLLFQVAGRLQDTIRSADIVARLGGDEFVVVLPLINSNISAAHAVRKIQQTL 543 Query: 479 SKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNE 536 S+ ++ +T SIGIS G+ L+ A AM + + G N +QFF+ MN Sbjct: 544 SQGYTVESHELNITPSIGISVYPTDGETVQELMKNADLAMYHAKSAGRNSYQFFTQEMNL 603 Query: 537 MVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIP 596 V+ RLVL + L+ A+ +++ L YQPQI ++GE+ G+EAL RW P+ G V P FIP Sbjct: 604 TVQARLVLESDLRTALERDEMMLHYQPQIDLKSGEVVGVEALLRWRHPVRGAVAPDVFIP 663 Query: 597 LAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHA 656 +AE+ G I +IG + + AC QLA W SQ + ++VNLSA F+ + LP+ ++D + A Sbjct: 664 VAEDTGLILSIGEFALKSACEQLALWISQGLSPLRMAVNLSARQFKQSNLPSLLADILAA 723 Query: 657 WGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTE 716 G+ H L +EITES M+ ++ LR+MGV L++DDFGTG+S LS L PV Sbjct: 724 TGVAAHLLELEITESSAMDDPNTAIVHLRTLREMGVELAIDDFGTGYSSLSYLKLFPVNR 783 Query: 717 IKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGY 776 +KID+SFV T+ + A ++ +L VVAEGVET+ Q LR C ++QGY Sbjct: 784 LKIDRSFVRGIDTDSEDAEIAAATIALAHNLGKEVVAEGVETEAQCRFLRGQQCDILQGY 843 Query: 777 FFSRPLPAEEIPGWMSS 793 FFS PL A I ++++ Sbjct: 844 FFSEPLSAAGIASYLAA 860 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 285 bits (729), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 167/494 (33%), Positives = 263/494 (53%), Gaps = 26/494 (5%) Query: 311 AEIQNAQSWSATIRQRDGAP------AGILQIKTSSGAETSAFIERVADISQHMAALALE 364 A +Q++ SW I Q+ GI ++ G + +F+ +DIS E Sbjct: 916 ASLQHSGSWEGEILQKRKTGELYPSWVGITAVRDEEG-DLVSFVCFFSDIS--------E 966 Query: 365 QEKSRQHIEQLIQFDPMTGLPNR----NNLHNYLDDLVDKAVSPVVYLIGVDHIQDVIDS 420 ++ S + I +L +D +T LPNR + LH L V+ + +D + + DS Sbjct: 967 RKASERRIHRLAYYDALTHLPNRTLFQDRLHTALQQAERNGQWVVLMFLDLDRFKPINDS 1026 Query: 421 LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV-----SLENDVSNITQIADELR 475 LG+A D+ L EV R + D + R+ G +F L+ E + Q+A+ + Sbjct: 1027 LGHAAGDRMLQEVATRLSACVSQDDTVARMGGDEFTLLLPSQGDREIALKRAIQVAELIL 1086 Query: 476 NVVSKPIMIDDKPFPLTLSIGISYDL--GKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPA 533 +++P ++ + F +T SIG++ G L+ A AM + ++ G N +QF+ Sbjct: 1087 GRLARPFTLEGREFFVTASIGVALSPQDGAELSLLMKNADTAMYHAKEMGKNNFQFYQAE 1146 Query: 534 MNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSR 593 MN ERL L + L+ A+ + L YQPQ + L G EAL RW P G VPPS Sbjct: 1147 MNARALERLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEALLRWQHPRRGLVPPSE 1206 Query: 594 FIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDA 653 FIP+ EEIG + +G W++AEAC+QL W + +P +SVNLSA F QL +++ Sbjct: 1207 FIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFADGQLGERIAAI 1266 Query: 654 MHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLP 713 ++ GI L +E+TES++M E + + L+ +G+ ++VDDFGTG+S L+ L P Sbjct: 1267 LYETGIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVDDFGTGYSSLNYLKQFP 1326 Query: 714 VTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVI 773 + +KID+SFVD ++ + AI ++ SLNL V+AEGVE++ Q + LR+ C + Sbjct: 1327 IDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEV 1386 Query: 774 QGYFFSRPLPAEEI 787 QGY F RP+PAE+ Sbjct: 1387 QGYLFGRPMPAEQF 1400 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 5/143 (3%) Query: 119 LALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 L + RD S + + + R +H ++V DP +IVQ N +F+ + GY ++ Sbjct: 836 LGIARDISQQRRAERELRMAATVFEHSTAAIMVTDPAGYIVQVNDSFSRLTGYSPADVLD 895 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 QP LL A+ + L + + E L +TGE I+ V D L Sbjct: 896 QQP-RLLTADRQEANQLKHVLASLQHSGSWEGEILQKRKTGELYPSWVGITAVRDEEGDL 954 Query: 239 QNLVMTFSDITE----ERQIRQL 257 + V FSDI+E ER+I +L Sbjct: 955 VSFVCFFSDISERKASERRIHRL 977 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 285 bits (728), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 167/457 (36%), Positives = 261/457 (57%), Gaps = 15/457 (3%) Query: 336 IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLD 395 ++ +GA S +I DIS E++ + + I L D +T LPNR +L + L+ Sbjct: 772 VRDETGA-ISHYIGSFTDIS--------ERKVNEERIHFLAHHDSLTLLPNRLSLQSRLE 822 Query: 396 DLVDKA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIE 451 + +A V I +DH +++ D+LG+ D LLEV R + + D + R+ Sbjct: 823 KVFQEAFISQTQIAVMFIDMDHFKNINDTLGHHVGDMLLLEVARRLKNIMGNDDIVARLG 882 Query: 452 GTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLL 509 G +FV+V + D + ++A+ LR+ +++ +ID+KP + SIGIS G + + L+ Sbjct: 883 GDEFVVVLSDTDHDRVAKVAEALRSGLNQTYLIDNKPLHSSPSIGISLFPTDGDSVEALM 942 Query: 510 STAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAET 569 A AM + G N +QFF+ AMN +V ER + L++AI+ N+L L YQPQ+ + Sbjct: 943 KNADMAMYRAKAAGRNNYQFFTAAMNTLVTERQQIETGLRQAIACNELLLYYQPQVDISS 1002 Query: 570 GELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHI 629 G++ G+EAL RW P G V P RFIP+AEEI I IG+WV+ A QLAEWR + Sbjct: 1003 GQVVGVEALIRWQHPELGLVAPDRFIPIAEEIDMIIPIGQWVLENALAQLAEWRDKGAKG 1062 Query: 630 PALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRD 689 ++VNLSA R + + + + + + L +EITES+ M++ + K + LR Sbjct: 1063 LRMAVNLSAHQLRKDTIVADIINVLTKHKLGKGALELEITESVAMQYPEQNAKLLAELRQ 1122 Query: 690 MGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNL 749 G+ L++DDFGTG+S LS L LP+ +K+D+SFV ++ A+ A S+ L L Sbjct: 1123 HGIELAIDDFGTGYSSLSYLKLLPLDRLKLDRSFVKDIESDPNDAAISAATISMAHELGL 1182 Query: 750 TVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEE 786 TVVAEGVE + Q +L + C ++QGY+FS+PL A++ Sbjct: 1183 TVVAEGVENEAQLVLLSGMGCDLVQGYYFSKPLAADD 1219 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 285 bits (728), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 236/820 (28%), Positives = 378/820 (46%), Gaps = 84/820 (10%) Query: 25 AVLINE-NDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKAR 83 A+LI++ + + N EKL GY E++G +I+ L+P + +HP +AR Sbjct: 33 ALLISDAHGTITMANQQVEKLLGYVAAELVGKSIEDLVPNRFKASHPVLRSEFTASPRAR 92 Query: 84 VEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQ----LI 139 G ++ +KDGS+ +LS++ + +++ + +RD S ++E+ R+ L Sbjct: 93 RMGNGMAVKARRKDGSECDVDVSLSRIETDEGMFFASALRDISERKRKEEELRRQNGVLS 152 Query: 140 IAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQ 199 + + D + +V N F + PD L PE + IR Sbjct: 153 TIFQSFPGGITLFDADLRLVAFNDQFKALLDL---------PDVLFEQPEPDFETLIR-- 201 Query: 200 QLLWKTAR--------DQDEFLLLTRTG-------EKIWIKASISPVYDVLAHLQNLVMT 244 + AR +Q ++ RT E++ + + V + Sbjct: 202 ---YNAARGEYGPGDPEQQVAAIIARTKKFVPHKIERVRPDGTSLSIRGVPLASGGFLSI 258 Query: 245 FSDITEERQIRQLEGNILAAMCSSPP---FHEMGEIICRNIESVLNESHVSLFALRNGMP 301 ++DIT+ +Q + + I AA S + +I R + + + S P Sbjct: 259 YTDITDRKQSEE-QLRIAAAAFESQTCMIITDANRVIQRVNRAFIETTGYSAEEAVGQTP 317 Query: 302 IHWASSSHGAE--------IQNAQSWSATI--RQRDGA--PAGI-LQIKTSSGAETSAFI 348 S HGA+ I +W I R+++G P + + + S +I Sbjct: 318 RLLQSGRHGADFYREMWETIHRTGAWQGEIWGRRKNGEVYPKWLSISAVVGTNGRVSHYI 377 Query: 349 ERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP---- 404 DI+ E++K+ + I L FD +TGLPNR L LD L +S Sbjct: 378 GTHNDIT--------ERKKAEERINALAFFDQLTGLPNRTLL---LDRLKQTILSSGRSD 426 Query: 405 ---VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE 461 + I +D+ + + D+LG+ DQ L +V R ++ + R+ G +FV+V L Sbjct: 427 SHGALLFIDLDNFKTLNDTLGHDVGDQLLKQVALRLTHCVRDGDTVARLGGDEFVVV-LA 485 Query: 462 NDVSNITQIADELRNVVSKPIMIDDKPFPL-------TLSIGISYDLGK--NRDYLLSTA 512 N +N + A + V K + ++ + L + SIG + G D L+ A Sbjct: 486 NLNTNDKEAAQDTETVAEKILATLNQTYQLGHVTHHSSASIGATLFKGPLIPIDDLMKQA 545 Query: 513 HNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGEL 572 +M + G N +FF P+M VK R + L A++ Q L YQ Q+ E L Sbjct: 546 DLSMYKAKAAGRNAVRFFDPSMEIAVKVRAEMEDDLLRALAEKQFLLHYQAQMVGE--RL 603 Query: 573 YGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEW--RSQNIHIP 630 G E L RW P G V P+ FIPLAEE G I +G WV+ AC QLA+W R + H+ Sbjct: 604 TGAEVLLRWQHPQRGMVSPAEFIPLAEETGLILPLGHWVLETACTQLAQWAGRPEVAHL- 662 Query: 631 ALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDM 690 L+VN+SA FR N +QV + G + +L +E+TES+++E+ +I ++ L+ Sbjct: 663 TLAVNVSAHQFRQNDFVDQVLGVLEKTGANPQRLKLELTESLLVENVEDIIDKMAALKHR 722 Query: 691 GVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLT 750 GVG S+DDFGTG+S LS L LP+ +KID+SFV LT+ ++ I ++ SL L Sbjct: 723 GVGFSLDDFGTGYSSLSYLKRLPLDHLKIDQSFVRDVLTDSNDASIARTIVALANSLGLG 782 Query: 751 VVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 V+AEGVET+ Q + L C QGY+FSRPLP E+ + Sbjct: 783 VIAEGVETEAQRDFLASSGCHTYQGYYFSRPLPIEDFESF 822 >UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47AR1_DECAR Length = 655 Score = 285 bits (728), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 174/485 (35%), Positives = 266/485 (54%), Gaps = 22/485 (4%) Query: 318 SWSATI--RQRDGA--PAGI-LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHI 372 SW I R++DG P + + G + S F+ +DIS E + + Sbjct: 168 SWEGEIWDRRKDGTIYPKQMRITAICEDGVQLSHFVAVFSDIS--------ESRAQAERL 219 Query: 373 EQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPV----VYLIGVDHIQDVIDSLGYAWADQ 428 E L + DP+T LPNR L +LD L++ A + + +I +D+ + + DSLG+ D+ Sbjct: 220 EYLARHDPLTNLPNRLALDAHLDTLLEGATPGINRLALLIIDLDNFKTINDSLGHHAGDR 279 Query: 429 ALLEVVNRFREKLKPDQYLCRIEGTQFVLV--SLENDVSNITQIADELRNVVSKPIMIDD 486 L E+ R ++ + L R+ G +FV+V L N+ + + ++ +L + P ID Sbjct: 280 LLSELARRLGAQMDLTKRLFRLGGDEFVVVVDQLINEEA-VIELVQQLAGGIGDPCNIDG 338 Query: 487 KPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVL 544 T SIGIS + G++ L+ A AM Y + NG N +FF+ MN +RL L Sbjct: 339 HVLHCTSSIGISLYPEDGRDAQALIRNADTAMYYAKANGRNNHKFFTEPMNAAANKRLHL 398 Query: 545 GAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEI 604 + L A++ NQL L YQPQI +G++ G+EAL RW PL G +PP+ FIP+AEE G I Sbjct: 399 ESELWCALAENQLVLYYQPQIDLLSGKVVGVEALVRWRHPLRGLIPPAEFIPVAEECGLI 458 Query: 605 ENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQL 664 +G WV+ ACRQ EW I + ++VN+SA FR + + V + G+ +L Sbjct: 459 LPLGHWVLLTACRQAREWLDAGIDMGEMAVNISAHQFRQPEFISSVQAILAETGLPTGRL 518 Query: 665 TVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFV 724 +EITES +M + + LR MG+ L++DDFGTG+S L+ L P+ +KID+SF+ Sbjct: 519 ELEITESTIMHEVDAAIQTLAQLRAMGIKLAIDDFGTGYSSLAYLRRFPLDRLKIDRSFL 578 Query: 725 DRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPA 784 T+ +L+ +I +G+SL L +VAEGVE Q E LR + C +QG+ F +P+ A Sbjct: 579 ADVETDPDAASLVTSIVLLGRSLGLQLVAEGVENFAQAEFLRTLECERVQGFHFYQPVCA 638 Query: 785 EEIPG 789 EE+ G Sbjct: 639 EEVVG 643 >UniRef50_C5D6R4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacillaceae RepID=C5D6R4_GEOSW Length = 951 Score = 284 bits (727), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 163/436 (37%), Positives = 250/436 (57%), Gaps = 7/436 (1%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVID 419 EQ+K+ + I L +DP T LPNR +D+ ++KA V I +D + V D Sbjct: 512 EQKKAEEKISYLAYYDPDTHLPNRTKFMEIIDEQLEKAKQKNRKLAVVFIDLDRFKLVND 571 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVV 478 S+G+ D+ L +VV R + L YL R G +F L+ E D + + A + V Sbjct: 572 SIGHYAGDEILKQVVQRIQHVLPAGAYLGRFHGDKFCLLLTERTDSEGVFKTAAHISKEV 631 Query: 479 SKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNE 536 KPI+ ++K F +T+SIGIS+ + G ++ LL A A++ +++GGN QF+S MNE Sbjct: 632 MKPIVYENKEFFITISIGISFYPNDGVDKHSLLKNADIALNKAKQSGGNRIQFYSAKMNE 691 Query: 537 MVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIP 596 RL + L++A+ N + L YQP I G + G EAL RW P G V P+ FI Sbjct: 692 ETLYRLEMERYLRKALENQEFFLCYQPIIDIHKGVIVGNEALIRWRHPKLGLVRPNEFIS 751 Query: 597 LAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHA 656 LAEE G I IGRWV+ AC+Q +W+ +SVN+SA F+ + V A+ Sbjct: 752 LAEETGLIHEIGRWVLVTACKQTKKWQQLWNQQLFVSVNVSARQFQHEGFIDDVKQALEQ 811 Query: 657 WGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTE 716 + + L +E+TE+ M+ + + ++ L+ +GVG+++DDFG+G++ S L +LPV Sbjct: 812 SQLSPNCLHLELTENSMLRNLHYSIQVMKELQQLGVGIAIDDFGSGYASFSYLKNLPVNI 871 Query: 717 IKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGY 776 +KID+SFV++ T +A+++AI ++G L L VAEGVET EQ E+L+ +HC QGY Sbjct: 872 LKIDRSFVEQMHTNSSDIAIVKAIITMGHGLGLKTVAEGVETVEQLELLKMLHCHHAQGY 931 Query: 777 FFSRPLPAEEIPGWMS 792 RP+ AEE+ +M+ Sbjct: 932 ALYRPVTAEELSTYMT 947 >UniRef50_D2LY77 Diguanylate cyclase/phosphodiesterase n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LY77_BACS4 Length = 886 Score = 284 bits (727), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 148/455 (32%), Positives = 262/455 (57%), Gaps = 7/455 (1%) Query: 340 SGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD 399 + + +R ++++ + A +KS + +++L +D +TGLPNR + YL+ L+ Sbjct: 426 TSTKLKQMFQRTNNMNKELEEQAGMLQKSEEKLQKLAYYDMLTGLPNRQHFQKYLESLLQ 485 Query: 400 -----KAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQ 454 KA + V + ++ + + D+LG+ D+ L V N+ + K + R+ G + Sbjct: 486 SEANKKAPTIAVMFVDLNQFKQINDTLGHKVGDELLKLVSNKLMKLEKEKIKVFRLGGDE 545 Query: 455 FVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTA 512 FV+V E D + + +L+ + ++PI++++ +T S G+S G D L+ A Sbjct: 546 FVIVLTEADKKEVKRFGGKLQRLFAEPIILNNMSLYVTASFGVSMYPKDGDTLDRLVRFA 605 Query: 513 HNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGEL 572 AM ++ G N QFF +M ER+++ L+EA+ NQ +L YQP++ A+T E+ Sbjct: 606 DMAMYNAKEKGRNYIQFFDQSMKADFSERMMINNGLREALERNQFELHYQPKVNAKTDEM 665 Query: 573 YGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPAL 632 G+EAL RWH P G+V P +FIP+AEE G I I W + +AC+Q +W+ + + Sbjct: 666 SGMEALMRWHHPELGNVSPGKFIPIAEESGLILKIDEWGLLQACKQNKQWQDAGLKKVPV 725 Query: 633 SVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGV 692 +VN+SA HF L V A+ G++ L +EITES+ ++ ++ + L++MGV Sbjct: 726 AVNISAKHFYHGYLSEMVKRALTISGLEAQYLQIEITESVFIKKMDDVIHTLNGLQEMGV 785 Query: 693 GLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVV 752 +S+DDFG GFS L++L+ LP++E+K+D+ F+ ++ ++++ I + SL L VV Sbjct: 786 KVSIDDFGNGFSSLNQLLKLPISEVKLDREFIRNIGENEKQASMVKVIIELAHSLQLNVV 845 Query: 753 AEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 EGVET+++ +L++ HC +QG+ FS+P+ A E+ Sbjct: 846 GEGVETEDELALLQQYHCDELQGFLFSKPVQASEL 880 >UniRef50_Q1GXN7 Diguanylate cyclase/phosphodiesterase n=3 Tax=Proteobacteria RepID=Q1GXN7_METFK Length = 951 Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 226/791 (28%), Positives = 389/791 (49%), Gaps = 54/791 (6%) Query: 26 VLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVE 85 + +++ E +F PAAE L G K EV G M+ P D E +R E Sbjct: 164 IFLSDGYEAVFGVPAAEAL-GRKPTEVWGR--PMMRPEDFEARLREVMRSGEE------- 213 Query: 86 GMSRELQLE--KKDGSKIWTRFALSKVSAEGKVY-YLALVRDAS----VEMAQKEQTRQL 138 +E++LE + + A+ + + +G++ L + RD S VE +++ R Sbjct: 214 ---QEIELEWVGDEHYVCQSLHAVPERNVKGEIKGVLTITRDISHIRRVERELRKRERYQ 270 Query: 139 IIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRL 198 +++ V + D ++ N A+ E G + + D L P A + Sbjct: 271 SALIENFPFVVWLKDLNSKLLAANSAYAEFAGVASKDELEGKTDFDL-FPLQDARTHVEG 329 Query: 199 QQLLWKTARDQDEFLLLT-RTGEKIWIKASISPVYDVLAHLQNLVMTFSDITE----ERQ 253 + + ++ + L +T R GEK WI+A SP+ V + V F DIT+ E + Sbjct: 330 DKRVLQSGQPSHSVLQVTKRNGEKAWIEAYKSPMV-VDGKVMGTVGFFRDITDIKQNEEK 388 Query: 254 IRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSH-GAE 312 + Q E + + + ++P ++ R + +N + + +G I S + G E Sbjct: 389 LIQRERELQSLIDNTPDTIIRYDLNARRL--YVNTPKLKRIGIESGRLIGTTPSEYPGGE 446 Query: 313 IQNAQSWSATIRQR-DGAPAGILQIKTSSGAETSAFIE-----RVADISQHMAALALEQE 366 + IR + A L++ + + FI + Q + LA+E++ Sbjct: 447 AY--MKYEEKIRGVINSATPDFLELHGKADNGNTWFIHVRIVPEFGEQGQVIGVLAVERD 504 Query: 367 -----KSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV----SPVVYLIGVDHIQDV 417 + R+ I L +D +TGLPNR + ++ ++ A + ++ +D ++V Sbjct: 505 ITELMEYRERIHYLAYYDALTGLPNRTLFADRVNQVLADASWHEQRFGLMMLDLDRFKEV 564 Query: 418 IDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRN 476 D+LG+ D L+ V R ++ + R+ G +F ++ E + ++ IA ++ + Sbjct: 565 NDTLGHQAGDDLLVAVAQRLNASVRSYDTIARLSGDEFAILLPELRNPDDLATIARKIND 624 Query: 477 VVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAM 534 ++KP +I DK ++ SIGI+ D G +R L +A AM + + G N +QF+S + Sbjct: 625 EIAKPFLIHDKELFISTSIGIAIYPDDGDDRATLFKSADVAMYHAKNYGRNNYQFYSREL 684 Query: 535 NEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRF 594 E ++LGA++++A+ N + +L YQPQ+ +GE+ G EAL RW +P G V P RF Sbjct: 685 GSKASEYIMLGASIRQALKNAEFELFYQPQVDLMSGEIVGAEALLRWRNPQLGVVMPDRF 744 Query: 595 IPLAEEIGEIENIGRWVIAEACRQ---LAEWRSQNIHIPALSVNLSALHFRSNQLPNQVS 651 I +AEE G I IG WV+ EAC L +R + H +++VNLS+ F N L V Sbjct: 745 IKVAEESGLIVEIGEWVLREACSAVVCLNRYRPDD-HPLSMAVNLSSRQFLYNDLLASVK 803 Query: 652 DAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVS 711 D + G L +EITES+++E EI + ++MG+ +S+DDF TG+S +S L Sbjct: 804 DILAETGCKPEWLKLEITESLLLEDSQEIISTLSTFKEMGITISIDDFCTGYSAMSYLGQ 863 Query: 712 LPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCR 771 P++++KID+SFV ++ L L+ AI I +L L +VAEGVE+K+Q +L+ C Sbjct: 864 FPISQVKIDRSFVRDIAAKQDKLELITAIIRIAHALRLELVAEGVESKQQANLLKIQGCT 923 Query: 772 VIQGYFFSRPL 782 + QGYFF +P+ Sbjct: 924 IAQGYFFGKPM 934 >UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KF61_9GAMM Length = 810 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 155/486 (31%), Positives = 272/486 (55%), Gaps = 17/486 (3%) Query: 313 IQNAQSWSATI--RQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQ 370 ++ +W I R++ GA L + + S F+ DI+Q +++ + Sbjct: 321 LKETGTWRGEIWNRRKSGAVFPELLTISKIDGQNSGFVAIFTDITQL--------KETEE 372 Query: 371 HIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWA 426 +++L +DP+T LPNR ++ L + +A V+ + +D +++ DSLG+ Sbjct: 373 QLQKLAHYDPLTELPNRYLINERLQQSIRRAQRRSERLAVFFLDIDSFKNINDSLGHLAG 432 Query: 427 DQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNI-TQIADELRNVVSKPIMID 485 D+ L NR RE L+ D + RI G +F+++ + + ++ T IA+++ + KP +++ Sbjct: 433 DKLLAMTANRLRELLRDDDTVGRIGGDEFLMLLEDINSPDVATNIAEKIIGALRKPTILE 492 Query: 486 DKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLV 543 + ++ S+GIS D G+ + L+S A AM ++ G N ++F+S + + ++ Sbjct: 493 GRSVSVSASVGISIYPDDGQTAETLMSNADAAMYSAKEQGRNTFRFYSENLTRAAFQNVL 552 Query: 544 LGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGE 603 + +AL+EA S N+ +L +QPQI T L G+E L RWH P G V P++FIP AE G Sbjct: 553 IDSALREAKSRNEFRLAFQPQIDIVTNSLLGLEVLLRWHHPTLGTVSPAQFIPQAERTGL 612 Query: 604 IENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQ 663 I +IG+WV+ +AC Q +W ++ + L+VN+SA FR+ +QV + ++ Sbjct: 613 IRDIGQWVLEQACLQGNKWLAEGLPFGRLAVNVSAPQFRAEDFVDQVRQVLEYANFPPNR 672 Query: 664 LTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSF 723 L +E+TES++++ ++ + LR MG+ ++DDFGTG+S LS L +P+ +K+DKSF Sbjct: 673 LELELTESVLVQDTEQLIGNMDELRAMGIQFAIDDFGTGYSSLSYLKKMPIDRLKLDKSF 732 Query: 724 VDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLP 783 VD T+ + EA+ ++GQ++ L V+AEG+E +EQ LR I C QG+ + P+ Sbjct: 733 VDNISTDDNDRIIAEAVVALGQAMGLEVIAEGIEYEEQARALRDIGCTQFQGFLYGMPMY 792 Query: 784 AEEIPG 789 I G Sbjct: 793 TSRIEG 798 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 62/236 (26%), Positives = 101/236 (42%), Gaps = 28/236 (11%) Query: 33 EVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQ 92 ++ N A E GY EE+IG N L+ + R + +++ +G K + E + Sbjct: 159 DIKLANSAWELALGYTPEELIGKNFLELVHEEDRAVTVKEMQNLSKGLKT----LYFENR 214 Query: 93 LEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVL 152 K+GS + A S +A+ A+ RD S E A K+ Q + +++ Sbjct: 215 YRHKNGS--YRVIAWSAAAADQDSIICAVGRDISKENAAKQGLFQAAAVFKNSGEGILIS 272 Query: 153 DPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEF 212 D + I N AF+++ GY EA G Q +LL A+ ++ L +T Sbjct: 273 DEKGLIRDVNAAFSQITGYSRDEAIG-QATSLLRSGRHDAEFYKKMWHALKETG------ 325 Query: 213 LLLTRTGEKIWIKASISPVYDVLAHL-----QN--LVMTFSDITE----ERQIRQL 257 T GE IW + V+ L + QN V F+DIT+ E Q+++L Sbjct: 326 ---TWRGE-IWNRRKSGAVFPELLTISKIDGQNSGFVAIFTDITQLKETEEQLQKL 377 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 176/464 (37%), Positives = 256/464 (55%), Gaps = 21/464 (4%) Query: 345 SAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP 404 S ++ +DI+Q ++++ + ++ L DP+T LPNR+ L LD+ + + Sbjct: 340 SNYVAVFSDITQ--------RKEAEERLQFLANHDPLTRLPNRSRLTASLDEALTRMDGE 391 Query: 405 ----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL 460 V I +D + + DS G+ DQ L E+ R + L R+ G +F L+ Sbjct: 392 DGRLAVMFIDLDRFKLINDSFGHQVGDQLLCEIAIRLSRVVGERGMLARLGGDEFTLLMS 451 Query: 461 ENDVSN-ITQIADELRNVVSKPIMIDDKPFPLTLSIGIS---YDLGKNRDYLLSTAHNAM 516 D + + +A ++ + KP+ ++ +T SIGIS +D G++ LL A AM Sbjct: 452 GFDSHHQLADMASDILAALGKPLCLEAHEVFITGSIGISVFPHD-GRDARTLLKNADVAM 510 Query: 517 DYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIE 576 ++ G N +QFF MN ERL+L L+ A+ ++ +L YQPQ+ A L G E Sbjct: 511 YRAKEAGKNTYQFFDIGMNTQTFERLLLENGLRMALERHEFELHYQPQLSAGERALAGAE 570 Query: 577 ALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNL 636 AL RW P G VPP+RFI LAEE G I+ IG WV+ EACRQLA W +Q + +P L+VNL Sbjct: 571 ALLRWRHPQLGLVPPARFIALAEETGLIKPIGDWVLREACRQLAAWDAQGLRVPRLAVNL 630 Query: 637 SALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSV 696 S F LP +V+ A+ A G+ +L +EITESM+M+ TE + L+ +GV LS+ Sbjct: 631 SPRQFGQPSLPAKVAGALQAAGLAAGRLELEITESMIMQSPTEAVSLLSELKSLGVWLSI 690 Query: 697 DDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGV 756 DDFGTG+S LS L P+ +KID+SFV+ + A+ EAI ++ + L VVAEGV Sbjct: 691 DDFGTGYSSLSHLKRFPLDTLKIDQSFVEGLPDDDDNAAIAEAILAMAKKLKFQVVAEGV 750 Query: 757 ETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI----PGWMSSVLP 796 E++EQ L C V+QGY F RPLPA E GW P Sbjct: 751 ESEEQAAFLEGKGCHVLQGYHFGRPLPAGEFAALAAGWRREAEP 794 Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 61/249 (24%), Positives = 105/249 (42%), Gaps = 10/249 (4%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A A+ + +EQ+++G + I +++++ + NP ++ GY+ EE+ G M +P+ L Sbjct: 115 AKREAEDRYLALVEQSLVG-IYIMQDEKLAYVNPKLAEIMGYQPEEMEG----MTMPQLL 169 Query: 66 RPAHPEYIRHNR-EGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRD 124 P E +R + + M + +KDG + G+ + +V D Sbjct: 170 VPGEAERLRQQLLRRFRDNISVMHYATRGLRKDGVLVDMEVHSRLFELNGRKAVIGVVMD 229 Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 S + R ++ +++LD I+ N AFT + GY EA G Sbjct: 230 ISERLLADTNLRLAAKVFENSAEGILILDAGARIIAVNDAFTRITGYAEEEALGKAS--- 286 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 I R +QQ L Q E L + G+ + SIS + D L N V Sbjct: 287 -RIFSAEQQARAAMQQALADCGHWQGEMLDRRKGGQWYPAELSISALRDEDGLLSNYVAV 345 Query: 245 FSDITEERQ 253 FSDIT+ ++ Sbjct: 346 FSDITQRKE 354 >UniRef50_B8G9I9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Chloroflexus RepID=B8G9I9_CHLAD Length = 1101 Score = 283 bits (723), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 241/834 (28%), Positives = 376/834 (45%), Gaps = 85/834 (10%) Query: 18 LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNR 77 L Q ++ + + +++ N A L+ + E +IG + L + P P + Sbjct: 274 LSQINEAVIVTDRSGAIIYLNEMAAYLYAVQPEAIIGQPLSRLFTAEPLPYQPV-----Q 328 Query: 78 EGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS----AEGKVYYLALVRDASVEMAQKE 133 ++ G EL DG + + + A G L +VRD + +E Sbjct: 329 PSVQSFSTGWRGELIHRLPDGRAMMVEVRIDPLYHDELANGGA--LIVVRDITARKQAEE 386 Query: 134 QTRQLIIAVDHLDRPVIVLD------PERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI 187 + R L V H + VI+LD P I N A +++ GY +E G L I Sbjct: 387 RLRLLESVVVHTNDAVIILDAEPLHAPGPFIRYANAACSQLTGYATNELIGRS----LRI 442 Query: 188 PEFPADNRIRLQQLLWKTARDQD-EFLLL--TRTGEKIWIKASISPVYDVLAHLQNLVMT 244 PA + + L +L R Q F LL TR G+ IW+ S+SPV D + + Sbjct: 443 LHGPATDSVTLNRLWEAMERQQPARFALLYYTRAGKPIWVDLSLSPVTDEYGKATHFIAL 502 Query: 245 FSDITEERQIRQLEGN---ILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMP 301 DI+ ++ LE + ILA + P M + IE + ++A +G P Sbjct: 503 HRDISAQKLAAFLEHDRSAILALLLQHAPVTAMLNRLVTLIER--QRPNWLVWAELDGHP 560 Query: 302 ------------------------------------IHWASSSHGAEIQNAQSWSATIRQ 325 HW H + + W + + Sbjct: 561 AAASKPLAGEADLIGPRLRQMIARHNQKAPIVLDLHTHWDQLRH---LSVSSGWIWPLAK 617 Query: 326 RDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLP 385 GA A I +T +E+ + RVA + L + + +++D +TGLP Sbjct: 618 AHGALA-IFHQQTDWVSESDQMLLRVA---TELFNLIADHANLNAQLNYQVRYDTLTGLP 673 Query: 386 NRNNLHNYLD----DLVDKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKL 441 NRN L +D D ++ + I +D + V DSLG+ D+ L V F Sbjct: 674 NRNLLQERIDLALRDARERRHIVALLFIDLDGFKQVNDSLGHPIGDRFLKHVSQAFAACA 733 Query: 442 KPDQYLCRIEGTQFVLVSLENDVSNITQIADE-LRNVVSKPIMIDDKPFPLTLSIGISYD 500 +P L R+ G +F+L+ + + + IA + L + + P + D LT SIGIS Sbjct: 734 RPQDTLGRMGGDEFLLLMPDLPDARLADIAAQRLLDALQTPFLHDGHELRLTASIGISLF 793 Query: 501 LGKNRDY--LLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLK 558 D LL A +AM ++ +G+ + P + RL L A L+ A+ ++L Sbjct: 794 PRDGVDVVTLLKNADSAMHRAKELKRSGFLHYRPEHSRRAHTRLALEAQLRRALERHELA 853 Query: 559 LVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQ 618 + YQPQ + + G+EAL RWH P G + P F+P+AEE I IG WV+ EACRQ Sbjct: 854 VYYQPQYDLVSEGITGVEALVRWHHPQRGPIAPGEFVPIAEESDLIIEIGSWVLREACRQ 913 Query: 619 LAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDT 678 W+ + +SVN+SA + +V+ +HA G+ L +EITE +M++ Sbjct: 914 AMAWQQAGYPLLRISVNVSARQLLRPEFVAEVAAVLHATGLPAQYLELEITEGVMLDDPI 973 Query: 679 EIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRIL---- 734 ++I LR MGV +++DDFGTG+S L+ L L + +KID++FV R + E++ + Sbjct: 974 YAARQIDQLRHMGVRIALDDFGTGYSSLAYLRQLRLDALKIDQAFV-RAIDEQQNVVTNS 1032 Query: 735 -ALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 ALL AI ++ SL L VVAEGVET EQ L + C V+QGY S+PLPA+E+ Sbjct: 1033 RALLRAIINLAHSLGLAVVAEGVETDEQRAALLSMGCDVLQGYLISQPLPADEV 1086 >UniRef50_Q1K1R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1R0_DESAC Length = 709 Score = 283 bits (723), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 157/425 (36%), Positives = 251/425 (59%), Gaps = 9/425 (2%) Query: 371 HIEQLIQFDPMTGLPNRNN----LHNYLDDLVDKAVSPVVYLIGVDHIQDVIDSLGYAWA 426 +EQ++ +D +TGLP R+ LH+++ + + + +D +++ D+LG+ Sbjct: 272 QLEQILHYDTLTGLPQRDFFFDLLHSHMVGCQKNNRTLALLYLDLDRFKNINDTLGHTVG 331 Query: 427 DQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE--NDVSNITQIADELRNVVSKPIMI 484 DQ L EV R + ++ L R+ G +F L++L+ +++S +TQ+A + +V+S P+ I Sbjct: 332 DQVLQEVAQRLQNNIRITDNLSRMSGDEF-LITLDPADNLSEVTQLAQKFLSVISVPMKI 390 Query: 485 DDKPFPLTLSIGISYDLG--KNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERL 542 + F LT SIGIS G + + LLS A +AM +++G + ++F+ P MNE + L Sbjct: 391 EHHRFHLTASIGISLFPGDATSPEKLLSCADSAMYRAKESGRDAFRFYKPHMNEKAQGLL 450 Query: 543 VLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIG 602 L L+ AI QL+L YQPQ TG+L G+EAL RW+ P G +PP FIP AEE Sbjct: 451 WLETELRLAIEQEQLELHYQPQYDLNTGQLVGMEALVRWNHPEKGMIPPGEFIPQAEETS 510 Query: 603 EIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGH 662 I +G WV+ ACRQ+A W + I ++VN+SA+ F L V+ + +G+ Sbjct: 511 LIIPLGEWVLNTACRQIAAWHAMGISPIRMAVNISAVQFYRIDLAQMVAKLLDHYGLPAT 570 Query: 663 QLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKS 722 L +EITES++M+ + + L MG+ LS+DDFGTG+S LS L P++ +KID+S Sbjct: 571 LLELEITESVLMDDVEAAAETMNKLTAMGIQLSIDDFGTGYSSLSYLKRFPISTLKIDRS 630 Query: 723 FVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPL 782 F++ ++ A+ +I S+ + + V+AEGVET EQ L++ C+ QGY F+RPL Sbjct: 631 FINDVTINEQDAAIALSIISLAGHMGIEVLAEGVETVEQLSFLQRHACQYGQGYLFNRPL 690 Query: 783 PAEEI 787 PA++I Sbjct: 691 PAKDI 695 >UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KCA9_AZOSB Length = 689 Score = 283 bits (723), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 160/440 (36%), Positives = 247/440 (56%), Gaps = 7/440 (1%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA----VSPVVYLIGVDHIQDVID 419 E + + I QL FDP+TGLPNR+ L + ++ +A + + I +D + V D Sbjct: 245 EIKAAEDRIRQLAYFDPLTGLPNRSLLEDRAGQVLVRAGRDRRAATLMFIDLDRFKTVND 304 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVS 479 SLG+ DQ L R R+ ++ + R+ G +F++++ + ++A+++ V + Sbjct: 305 SLGHLMGDQLLRLAGQRLRDSVRLSDTVARLGGDEFIVLAPDTGAEGAVRLAEKILEVFA 364 Query: 480 KPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEM 537 P +DD+ ++ SIGI+ D GK+ LL +A AM ++ G NG++ FS MN Sbjct: 365 APFDLDDRELTISPSIGIARYPDDGKDFPALLQSADIAMYQAKREGRNGFRMFSIEMNAP 424 Query: 538 VKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPL 597 + E L+L L+ A+ + QL LVYQP + +G + G EAL RW P HG + P RFIP+ Sbjct: 425 ILESLLLETQLRRALDHGQLSLVYQPMVDIASGRIVGAEALLRWQHPQHGEISPVRFIPV 484 Query: 598 AEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAW 657 AEE G I IG WV+ +A Q+ WR+ ++VNLSAL F + N V + + Sbjct: 485 AEESGLILPIGEWVLEQALGQVQRWRAAGHPDLVMAVNLSALQFERLNISNTVLRLLDHY 544 Query: 658 GIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEI 717 G+ G L +E+TES++ME + L D GV LSVDDFGTG+S L+ L LP+ ++ Sbjct: 545 GLPGSALELELTESVLMEDAERAVAAMLNLADRGVRLSVDDFGTGYSSLAYLTRLPLAKL 604 Query: 718 KIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYF 777 KID+SFV ++ ++ I + +SL L V+AEGVE + Q +LR+ C QGY Sbjct: 605 KIDRSFVRNIPSDASARSVARTILDLARSLALEVIAEGVENEAQLLLLREWCCDQAQGYL 664 Query: 778 FSRPLPAEEIPGWM-SSVLP 796 +SRP+PA + ++ LP Sbjct: 665 YSRPVPARAFEALLRAATLP 684 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 167/475 (35%), Positives = 265/475 (55%), Gaps = 19/475 (4%) Query: 332 GILQIKTSSGAETSAF-----IERVADISQHMAAL--ALEQE-KSRQHIEQLIQF----D 379 GI+ I+ + E++ ++A I+ A L A +QE R+ IE+++++ D Sbjct: 460 GIIYIEKNQNLESNNLSLLTGFAQLASIALDNANLYQAAQQELAERKRIEEILRYLAYHD 519 Query: 380 PMTGLPNRNNLHNYLDDLVDKA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVN 435 +T LPNR ++ L +++A V + +DH + V D+LG+ DQ L + Sbjct: 520 SLTELPNRTLFNDRLSMALNQAHRNKNKLAVMFLDLDHFKKVNDTLGHDIGDQLLKGIAQ 579 Query: 436 RFREKLKPDQYLCRIEGTQF-VLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLS 494 RF + L+ + RI G +F +L+ N + +AD++ + ++ P +I + F +T S Sbjct: 580 RFSKLLRKGDTIARIGGDEFTILLHNITRAENASIVADKIIDTLANPWIIGNHEFHITTS 639 Query: 495 IGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAI 552 IGI+ D G + + LL A AM ++ G N +QF++P MN R L L+ A+ Sbjct: 640 IGIALYPDDGTDAESLLKNADAAMYQAKEMGRNNYQFYTPTMNAQTLRRFELENNLRRAL 699 Query: 553 SNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVI 612 + + YQPQ+ TG++ G+EAL RW P G + P+ FIP+AEE G I IG W++ Sbjct: 700 DRKEFVIYYQPQVEIHTGKIVGVEALIRWQHPQRGMISPAEFIPMAEETGLIIPIGEWIL 759 Query: 613 AEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESM 672 AC Q W+ + ++VNLSA F LP +S+ + G+ L +EITES+ Sbjct: 760 RRACAQNKAWQDRGFSPMRVTVNLSARQFLQPHLPQYISNVLEDTGLGPQWLELEITESL 819 Query: 673 MMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKR 732 M+ K + LR MG+ L++DDFGTG+S L+ L LP+ +KID+SF+ TE Sbjct: 820 AMKDVAFTEKTLIELRKMGITLAIDDFGTGYSSLNYLKRLPIDILKIDRSFIHDLNTESD 879 Query: 733 ILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 +A++ AI ++G +L + VVAEGVETKEQ LR+ C ++QGY F++PLP E+ Sbjct: 880 DVAIISAIITLGHNLKMKVVAEGVETKEQLMFLRQQQCDLMQGYLFTKPLPVREL 934 >UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L753_EXISA Length = 819 Score = 282 bits (721), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 159/428 (37%), Positives = 244/428 (57%), Gaps = 5/428 (1%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP--VVYLIGVDHIQDVIDSL 421 E+++ I L+ DP+TGLPNR + LD L+ ++ S +Y I +D+ + + D Sbjct: 380 ERKRIEAQINDLVYLDPLTGLPNRRLFSDRLDALLGQSQSEQFALYYIDLDNFKVINDRF 439 Query: 422 GYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKP 481 G++ DQ L +V R + ++ L R+ G +F+++S + + A EL NV+ P Sbjct: 440 GHSIGDQFLKQVTTRIQSTIQKTDTLARLGGDEFIILSPDTKSNLAAHRAQELINVLHPP 499 Query: 482 IMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVK 539 ++++ SIGIS G + L+ A AM + +G NG+QFF+ +NE V Sbjct: 500 FELENEEVFTGASIGISLHPSDGDTAEELIKNADIAMYRAKADGKNGYQFFTNELNESVS 559 Query: 540 ERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAE 599 R L AL++ I + + YQPQI ET + G+EAL RW+ P G + P FIP+AE Sbjct: 560 RRSNLSMALRKGIGRGEFTVHYQPQIQLETEMVIGMEALVRWNHPELGMISPGEFIPIAE 619 Query: 600 EIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGI 659 E G I +G +V+ EACRQ W+ +I ++VN+SA+ F LP VS A+ A G+ Sbjct: 620 ETGSIHRLGEFVLNEACRQNKAWQDASIPPFRVAVNISAVQFAQKDLPEVVSRALAASGL 679 Query: 660 DGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKI 719 + L +E+TES++ D I + + L +GV LS+DDFGTG+S LS L P+ +KI Sbjct: 680 EAQYLELELTESVIQSADRAI-ETMHELVALGVHLSIDDFGTGYSSLSYLKLFPIDTLKI 738 Query: 720 DKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFS 779 D+ F ++++ AL++ I + L+L V+AEGVET+ Q L+ C QGYF++ Sbjct: 739 DQHFTKNIESDEKDAALVKTIIRMAHELDLNVIAEGVETENQVAFLKAESCNQAQGYFYN 798 Query: 780 RPLPAEEI 787 RPLPAEEI Sbjct: 799 RPLPAEEI 806 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 54/101 (53%) Query: 26 VLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVE 85 ++ + N ++ +N A L+GY +E++G +I +IP R AH +R G+ RV Sbjct: 279 IVADHNRTILQWNQGATDLFGYTTDEMVGQSIVAIIPERFREAHERGMRRYEATGEKRVI 338 Query: 86 GMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDAS 126 G + EL +KDG ++ +L + +++ +++RD S Sbjct: 339 GQTVELIGLRKDGVEVPIEMSLGTWKTDKGIFFSSIIRDIS 379 >UniRef50_Q2B961 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B961_9BACI Length = 974 Score = 282 bits (721), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 158/431 (36%), Positives = 239/431 (55%), Gaps = 7/431 (1%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVID 419 EQ++ Q + QL +D TGLPNR LDDL+ KA V + +D + + D Sbjct: 531 EQKRIEQEMTQLAYYDKDTGLPNRLKFMEELDDLLQKAKKKKRPLAVLFMDIDRFKLIND 590 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV-SLENDVSNITQIADELRNVV 478 SLG+ DQ L ++ R L P + R G +F L+ + E D S +T++++ + + Sbjct: 591 SLGHYAGDQILRQIAGRIEAILPPGSFFGRFSGDKFTLILAKEADSSRVTKLSNHILQAI 650 Query: 479 SKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNE 536 S P+ ++ F +T SIG S G ++ L+ A AM+ + GGN ++S MNE Sbjct: 651 SSPVYYGEQEFFITGSIGASLYPGDGHEKETLMKNADIAMNRSKHQGGNRLTYYSTEMNE 710 Query: 537 MVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIP 596 +L L + L++A+ + L YQP ETG +YG EAL RW+ P G V P FIP Sbjct: 711 QTLLKLELESYLRKALQKKEFFLCYQPLTNLETGAIYGSEALIRWNHPKLGLVSPGDFIP 770 Query: 597 LAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHA 656 LAEE G I IG WV+ ACRQ EW ++ + +SVN+S F+ ++V + Sbjct: 771 LAEETGLINEIGHWVLQTACRQTKEWHNKGLGSLTVSVNVSVHQFQQPGFVHKVLQVLKE 830 Query: 657 WGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTE 716 ++ L +E+TES M+ + IQ L+ G+ +++DDFGTG+S LS L LP+ Sbjct: 831 TMLEPQFLVLELTESSMLRNMENSILVIQELQRNGIRVAIDDFGTGYSSLSYLKHLPIDA 890 Query: 717 IKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGY 776 +KID+SF+D + +A++ AI ++G L++ VVAEGVET EQ +L+ + C QG+ Sbjct: 891 LKIDRSFIDNLRSGSPDIAIVNAIITMGLGLHVKVVAEGVETAEQMRLLKDLKCHFAQGF 950 Query: 777 FFSRPLPAEEI 787 F RPL AE+ Sbjct: 951 FIHRPLGAEQF 961 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 281 bits (719), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 183/546 (33%), Positives = 276/546 (50%), Gaps = 34/546 (6%) Query: 257 LEGNILAAMCSSPPFHEMG----EIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAE 312 L+ N M +S H G E + RN + + + H RN W + Sbjct: 510 LDPNCHIVMVNSAFTHITGYSEEETLGRNPKMLASGQHD-----RNFYATMWEA------ 558 Query: 313 IQNAQSWSATI--RQRDGA--PAGIL-QIKTSSGAETSAFIERVADISQHMAALALEQEK 367 I+ W + R++DG+ P +L Q S + +I D++ E+++ Sbjct: 559 IETEGRWQGEVWNRRKDGSLYPEWLLIQTMRDSRGTLTHYIGTFTDLT--------ERKE 610 Query: 368 SRQHIEQLIQFDPMTGLPNRNNLH---NYLDDLVDKAVSPVVYL-IGVDHIQDVIDSLGY 423 + + ++ L FDP+TGLPNR LH N L + P+ + + +D+ ++V DSLG+ Sbjct: 611 TEERVQWLAHFDPLTGLPNRTLLHIRSNLAISLAQRRHEPLALMFLDLDNFKNVNDSLGH 670 Query: 424 AWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIM 483 D+ L + R ++ + R+ G +FVLV D +A+ L N+ ++ Sbjct: 671 GVGDELLKQFSQRLVNAVREQDTISRLGGDEFVLVLPGTDTDGAAYLAERLLNIAARQYN 730 Query: 484 IDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKER 541 I+ LT+SIGI+ G + D L +A AM +++G N + FF+ M Sbjct: 731 IERHEINLTVSIGIAMYPTDGTDFDTLWRSADAAMYRAKQSGRNDYCFFTTEMQARSART 790 Query: 542 LVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEI 601 L + AL+ A+ NQ LVYQPQ+ T + G EAL RW P G+ PP FIP+AE Sbjct: 791 LQIDNALRRALERNQFSLVYQPQLSLNTNRIVGFEALIRWTHPQFGNTPPDEFIPIAESN 850 Query: 602 GEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDG 661 G+I IG WV+ A RQL W+ + +SVNLSA+ FR +LP V + G+ Sbjct: 851 GQIIPIGEWVLKTAVRQLRLWQDNGLKDVTISVNLSAVQFRHPRLPELVMAILEEAGVSP 910 Query: 662 HQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDK 721 L +E+TE + ME+ I LR G+ +S+DDFGTG+S L+ L V +KID+ Sbjct: 911 ECLQLELTEGVAMENPLAAITVIDELRKKGIRISIDDFGTGYSSLTYLKRFNVYSLKIDR 970 Query: 722 SFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRP 781 SFV + +A++ A+ S+ SL + VAEGVETKEQ E LR C IQGY+ SRP Sbjct: 971 SFVQDLPNDTEDMAIVSAVISLADSLGMITVAEGVETKEQLEFLRSRGCTEIQGYYLSRP 1030 Query: 782 LPAEEI 787 L A+ + Sbjct: 1031 LQADAV 1036 >UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWZ7_9PROT Length = 1217 Score = 281 bits (719), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 160/458 (34%), Positives = 257/458 (56%), Gaps = 12/458 (2%) Query: 343 ETSAFIERVADISQHMAALA--LEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDK 400 E + E +D++ + AL + +++ ++ + D +TG+PNR LH+ + + Sbjct: 747 EVALLEELASDLAYGIGALRTRVAHKEAEDRLDFMAHHDALTGMPNRILLHDRFEQVAAT 806 Query: 401 A----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFV 456 A + + + +D V D LG + AD L++VV R ++ + R G +F+ Sbjct: 807 ARRRGSNVAMLFLNLDDFHLVNDVLGRSLADHMLVQVVERLHGCIRESDTISREGGDEFI 866 Query: 457 -LVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGKNRDY--LLSTAH 513 L+ D++ I I ++ + S+P +DD +T SIGIS RD+ L+S + Sbjct: 867 ILLGDVGDLAAIEIIVQKILDAFSEPFTVDDHIVSVTSSIGISIFPNDGRDFNRLISQSE 926 Query: 514 NAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELY 573 A+ + G + + FF+ MN E + L L+ AI N + ++ YQPQI + Sbjct: 927 AALQKAKAAGKDTYNFFTEQMNINALEHMQLQGQLRHAIINQEFRIYYQPQIDTLNERMI 986 Query: 574 GIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPAL- 632 G EAL RW P HG VPP +FIPLAE G I +G WV+ EACRQ WR +N +P++ Sbjct: 987 GAEALVRWQHPQHGLVPPLKFIPLAERSGLIIPLGEWVLNEACRQAQVWRKRN-RMPSMV 1045 Query: 633 -SVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMG 691 +VNLSA+ F+ + V A+ G+ L +E+TES++++ + + + L+D+G Sbjct: 1046 MAVNLSAVQFKRGNIVETVIQALERSGLPAENLELELTESILLDDVEVVMETLHRLKDIG 1105 Query: 692 VGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTV 751 + LS+DDFGTG+S LS L L V ++KID+SFV + + A++ AI +G +L LTV Sbjct: 1106 IKLSIDDFGTGYSSLSYLKRLAVDKLKIDQSFVRDMVVDPEDAAIVSAIIQLGHTLQLTV 1165 Query: 752 VAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPG 789 +AEGVET+ Q ++L+ + C +QGY FSRP+PAE+ G Sbjct: 1166 IAEGVETRAQLQLLKSLECNEVQGYLFSRPIPAEDFSG 1203 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 61/281 (21%), Positives = 113/281 (40%), Gaps = 45/281 (16%) Query: 1 MKLTDADNAADGI------FFPALEQNMMGAVLINE-NDEVMFFNPAAEKLWGYKREEVI 53 + +T++ ++AD I F Q +G LI+ N + NP + E+ Sbjct: 328 LDITESRHSADVIRLSQERFATIFRQAPLGMALIDSLNGTIHELNP--------RFAEIA 379 Query: 54 GNNIDMLIPRD-LRPAHPEYIRHNREG----GKARVEGMSRELQLEKKDGSKIWTRFALS 108 G +++ + D + HPE ++ + + R+ G + E + + D S +W R ++ Sbjct: 380 GRSVEEMKAVDWMSITHPEDVQADLDNMALMNAGRIPGFTMEKRYFRPDRSIVWVRMTIA 439 Query: 109 KVSAE--GKVYYLALVRDASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDPERHIVQCN 162 + E +L ++ D + E R+ L ++H V D + + CN Sbjct: 440 PLRGEKGSSPQHLCMIEDITERKQADEALRESKDLLRSIIEHAPIRVFWKDAQSRYLGCN 499 Query: 163 RAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKT----------ARDQDEF 212 AF +A QP+ L+ +F D R Q L++T A+ E Sbjct: 500 SAFAH-------DAGLTQPEELVGKSDF--DMGWREQAELYRTDDHRVMASGEAKLGFEE 550 Query: 213 LLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQ 253 T G IW++ S P+ L L+ + DIT+ ++ Sbjct: 551 PQTTPEGRHIWLRTSKVPLRSAAGELFGLLGIYEDITQRKE 591 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 281 bits (718), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 172/480 (35%), Positives = 264/480 (55%), Gaps = 21/480 (4%) Query: 316 AQSWSATIRQRDGAPAGILQIKTSSG-AETSAFIERVADISQHMAALALEQEKSRQHIEQ 374 ++ T ++DG+ I+ + + S A + V DIS Q+ + Q I + Sbjct: 103 GHNYELTGLRKDGSTLPIMVLGSPSVIGGLPASVGTVLDISA--------QKAAEQRIRE 154 Query: 375 LIQFDPMTGLPNRNNLHNYLDDLV-----DKAVSPVVYLIGVDHIQDVIDSLGYAWADQA 429 L +D +TGLPNR L + L+ +K+ V++L +DH + V DSLG++ D+ Sbjct: 155 LADYDVLTGLPNRRLLRERFEQLLAAAEREKSEIAVIFL-DLDHFKRVNDSLGHSVGDEL 213 Query: 430 LLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPF 489 L EV R ++ L R+ G +F+ + ++A L V S+P + Sbjct: 214 LCEVARRLDSVVRRIDTLARLGGDEFIFAMPGFHTAAAVEVARRLVEVFSRPFEVAGHEL 273 Query: 490 PLTLSIGIS---YDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGA 546 +T S+GIS +D G++ + LL A AM ++ G N +QF+S MN +RL++ + Sbjct: 274 TVTPSLGISIYPHD-GRDLETLLRNADTAMYRAKEMGRNAFQFYSSEMNTTTLDRLLMES 332 Query: 547 ALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIEN 606 L+ A+ N+ L YQP + ETG + G+EAL RW P G + P RFI +AEE G I Sbjct: 333 NLRRALVQNEFILHYQPLVNLETGLIIGVEALIRWLHPELGLIMPDRFIHVAEETGLINP 392 Query: 607 IGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTV 666 IG WV+ EACRQ W + ++VN++ + FR V+ A+ G+D +L + Sbjct: 393 IGDWVLCEACRQAKAWCDAGLPPICMAVNVAPVQFRQAGFVEMVAGALATSGLDASRLEL 452 Query: 667 EITESMMMEHDTEI-FKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVD 725 E+TE +M HD +I + L MGV LS+DDFGTG+S L+ L PV ++KID+SFV+ Sbjct: 453 ELTERTVM-HDADINMGTLSALHRMGVELSLDDFGTGYSSLAYLKRFPVGKLKIDRSFVN 511 Query: 726 RCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAE 785 T+ A+ I S+G+SL +TV+AEGVE EQ +LRK+ C + QGY+FSRP+ A+ Sbjct: 512 DLETDPDDWAIASTIVSMGRSLRMTVLAEGVEKVEQLALLRKMGCDMAQGYYFSRPMSAD 571 >UniRef50_Q2BPN3 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) withPAS/PAC sensor n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPN3_9GAMM Length = 878 Score = 281 bits (718), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 165/444 (37%), Positives = 249/444 (56%), Gaps = 14/444 (3%) Query: 347 FIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDD-LVDKAVSP- 404 F+ +ADIS A S + + L D +T LPNR LD L + S Sbjct: 429 FVSVIADISNIKA--------SEEKLSHLAHHDALTNLPNRLLFSARLDHALTHREASEK 480 Query: 405 -VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLEN 462 V++ + +D + + DSLG+ + DQ LL+V R + L L R+ G +F +LV Sbjct: 481 IVMFHLDLDRFKHINDSLGHKYGDQLLLQVTERLKGVLSDKDTLARVGGDEFAILVEELE 540 Query: 463 DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIR 520 VS+ IAD L + +P +D K + T SIG++ D G + D L A A++ + Sbjct: 541 HVSDAESIADRLVEAMEQPFTLDGKDYFTTASIGLALAPDHGDDIDTLTKHADIALNQAK 600 Query: 521 KNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALAR 580 +G N + FF P ++E V+E + L L++A++ NQ +L YQPQ+ + + G EAL R Sbjct: 601 DSGRNNFAFFQPELSETVQEWIKLEPELRKALAENQFQLHYQPQVDSTGTAIVGAEALIR 660 Query: 581 WHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALH 640 WH P G +PP++F+P+AEEIG + IG WV+ A QL+ WRS+ + L++NL+ Sbjct: 661 WHHPEMGIIPPNQFLPIAEEIGLMNKIGEWVMNTALEQLSFWRSRGLIGFRLAINLAGDQ 720 Query: 641 FRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFG 700 LP V A+ + I L +EI E+ +MEH+ E + LR++GV LS+DDFG Sbjct: 721 ITKQNLPMVVMQALEHFQIPAEMLELEILETFLMEHEEEATSTFKQLRELGVHLSLDDFG 780 Query: 701 TGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKE 760 TG+S LS L LP+T++KID+S V + A+ +A+ + +L+LTV AEGVET+ Sbjct: 781 TGYSALSYLKKLPITKVKIDQSLVRDIPEDPNDEAIAKAVILLAHTLDLTVCAEGVETRA 840 Query: 761 QFEMLRKIHCRVIQGYFFSRPLPA 784 Q E L +C +QGY FS+P+ A Sbjct: 841 QREFLESENCDQLQGYLFSKPIEA 864 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 17/177 (9%) Query: 88 SRELQLEKKDGSKIWTRFAL--SKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHL 145 S E ++ K+G W R + SK+ ++ + + ++ D + E A EQ R IA Sbjct: 274 SHEFRVFHKNGQMHWVRGSALPSKLGSQEGLLWNGIILDITPEKASIEQLRLAGIAFSST 333 Query: 146 DRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKT 205 + +++ D I+ NRA+ + GY E G P L + + Q +WK+ Sbjct: 334 NEGIMITDKRNRIIDINRAYMNISGYGRDELIGKNPSILRS-----EHHSNEFYQSIWKS 388 Query: 206 ARD----QDEFLLLTRTGEKI--W--IKASISPVYDVLAHLQNLVMTFSDI--TEER 252 + Q E + GE + W I A P D L H +++ S+I +EE+ Sbjct: 389 LEEERHWQGEIWNRLKNGEVVPHWVNINAVHDPNTDALTHFVSVIADISNIKASEEK 445 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 162/443 (36%), Positives = 246/443 (55%), Gaps = 7/443 (1%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDL---VDKAVSPV-VYLIGVDHIQDVID 419 +Q+++ + IE+ FD +TGL NR+ L+ L V + P+ V + +D + + D Sbjct: 581 DQKENEEQIERYAHFDALTGLANRHALYRRLGQAITSVHQHQHPLAVLFVDLDKFKTIND 640 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVS 479 +LG+A D L EV R + PD L R+ G +F+LV D +++A + +S Sbjct: 641 TLGHAVGDVVLREVAGRLSDFAGPDDILARLGGDEFLLVLPGADERAASEVAACILTAMS 700 Query: 480 KPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEM 537 P+ +D + P T +IG+S G+ D L+ A AM + G N +Q ++P MN Sbjct: 701 VPVRVDGRELPTTPTIGVSLYPRDGEEADDLIRNADIAMYQAKARGRNTFQLYTPDMNAA 760 Query: 538 VKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPL 597 ERL L L+ A ++ L YQPQI G + G EAL RW P G V P RFIPL Sbjct: 761 AAERLQLQGELRNAHLRGEIMLHYQPQIDVTDGHVVGCEALMRWKHPTLGMVSPGRFIPL 820 Query: 598 AEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAW 657 AEE G I +G W I EACRQ W+ + ++VNLS F+ + V+DA+ Sbjct: 821 AEESGLIITLGNWAIREACRQAMVWQRAGLPPLTVAVNLSGCQFQQSNFTAVVADALADT 880 Query: 658 GIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEI 717 + L +E+TES++M ++ + L+ +GV LS+DDFGTG+S L+ L PV + Sbjct: 881 SLPPQYLELELTESIVMHDVEQVIATLTELKALGVQLSIDDFGTGYSSLNYLKRFPVDLL 940 Query: 718 KIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYF 777 KID+ FV T+ A++ AI ++G+ LNL ++AEGVET+ Q + L IQGY+ Sbjct: 941 KIDQGFVRDVETDPSDAAIVRAIIALGKILNLRLIAEGVETQGQLDYLHAAGVDFIQGYY 1000 Query: 778 FSRPLPAEEIPGWMSS-VLPLKI 799 FSRPLPAE++ +++ +LP+ + Sbjct: 1001 FSRPLPAEDMATYLAQRLLPVSL 1023 >UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SC6_GEOMG Length = 821 Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 168/482 (34%), Positives = 268/482 (55%), Gaps = 23/482 (4%) Query: 327 DGAPAGI----LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMT 382 DG P+G+ + G T FI+ V DI+ +++++ + I +L +D +T Sbjct: 342 DGEPSGLRLSAFPVFNEQGKATK-FIKVVEDIT--------DRKRAEEKIRRLAYYDSLT 392 Query: 383 GLPNRNNLHNYLDDLVDKA-----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRF 437 GLPNR + + L + A V +++L +D +DV DS G+ D+ L EV R Sbjct: 393 GLPNRPLMMDRLSQAIRHARRHGEVVALLFL-DLDRFKDVNDSQGHRVGDRLLQEVAARL 451 Query: 438 REKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIG 496 + L R+ G +FV+++ ++ + +AD++ +++P +D + + SIG Sbjct: 452 SGCTRESDTLARLGGDEFVIIAPGVRAATDASLLADKILAALAEPFTLDRQTLHIATSIG 511 Query: 497 ISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISN 554 I G N + LL A AM + GGN ++FFS MN ER L +++A++N Sbjct: 512 IVLFPSDGGNGEMLLQRADMAMYAAKDRGGNSYRFFSAEMNTRAVERHELEEDMRQALTN 571 Query: 555 NQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAE 614 + L+YQPQ+ T ++ G+EAL RW+ P G + PSRFIP+AEE G I +GRWV+ E Sbjct: 572 GEFFLMYQPQVNTGTWKVVGVEALVRWNHPRKGVILPSRFIPVAEETGFISKLGRWVLEE 631 Query: 615 ACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMM 674 ACRQ A+W+ + + VNL A F ++ VSD + G+ L +E+TE+M+M Sbjct: 632 ACRQGAQWQHDGLPPLQMGVNLCARQFTHEEIVGTVSDVLQKTGLPSELLEIELTETMLM 691 Query: 675 EHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRIL 734 + +T + Q L+ +GV L++DDFGTG+S + L P+ IKID+SF+ + Sbjct: 692 DSETAVSTLGQ-LKALGVRLAIDDFGTGYSSFNYLKHFPLDRIKIDQSFIRDIGQSRGNG 750 Query: 735 ALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 A++EAI ++ +SL V+AEGVET+EQ L I C IQG++FSRPL +++ + Sbjct: 751 AIIEAIVAVARSLGPEVLAEGVETEEQLRYLMSITCADIQGFYFSRPLLPDDVSRLIRES 810 Query: 795 LP 796 LP Sbjct: 811 LP 812 >UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=4 Tax=Rhizobiaceae RepID=A6U700_SINMW Length = 772 Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 159/486 (32%), Positives = 263/486 (54%), Gaps = 8/486 (1%) Query: 319 WSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQF 378 WS I R+ G + A + + ++ H+A +A+E++++ I L Sbjct: 287 WSTPILSRERKVLGTFALYAHEVATPCEQEQELIAMAAHLAGIAIERKRAEDRISFLAHH 346 Query: 379 DPMTGLPNR----NNLHNYLDDLVDKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVV 434 D +TGLPNR + L+++ ++ V+ + +D+ + + DSLG+A D+ L V Sbjct: 347 DALTGLPNRVLFEEQVDGMLEEIRERDQCAVLAFLDLDNFKLINDSLGHAAGDELLKAVA 406 Query: 435 NRFREKLKPDQYLCRIEGTQFVLV--SLENDVSNITQIADELRNVVSKPIMIDDKPFPLT 492 R R ++ ++ R+ G +F+++ L + + +++R+ ++ P+ + + ++ Sbjct: 407 GRMRASVRKADFVVRVGGDEFIILLNGLPKERDIVLSRLEDIRSAIAMPLQLQGRSLQVS 466 Query: 493 LSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKE 550 S+G++ + G+ LL+ A AM ++ G + Q F+ M ERL L+E Sbjct: 467 CSMGVACFPNQGRTAGELLANADMAMYRAKELGRDNIQVFTEEMAARAHERLQWQEELRE 526 Query: 551 AISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRW 610 A++ + L +QPQ+ TG ++ EAL RW+ P+ G + PS FIPLAEE G I IG W Sbjct: 527 ALAGEEFLLHFQPQMNLGTGRIFAAEALLRWNHPVRGIISPSVFIPLAEETGLIVPIGDW 586 Query: 611 VIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITE 670 + ACRQL W+ + +SVN+SA FR ++V++ + G++ L +E+TE Sbjct: 587 ALRAACRQLKAWQDAGLPPLIISVNVSARQFRERNWASRVAEILKETGLEARYLELELTE 646 Query: 671 SMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTE 730 S++M+ + L +GV L++DDFGTG+S LS L PV +KID+SFV + Sbjct: 647 SLIMQDVPGAIATMHALEAIGVHLAIDDFGTGYSSLSALKRFPVRRLKIDRSFVTDIPLD 706 Query: 731 KRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 +A+ AI S+ Q L L V+AEGVE++ Q E L+K C IQGYFFSRPL AE Sbjct: 707 ADDMAITSAIISLAQKLGLRVIAEGVESEAQVEFLQKAGCDEIQGYFFSRPLSAEAFESL 766 Query: 791 MSSVLP 796 +SS P Sbjct: 767 LSSARP 772 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 217/738 (29%), Positives = 361/738 (48%), Gaps = 65/738 (8%) Query: 102 WTRFALSKVSAEGKVYYLAL----VRDASVEMA-QKEQTRQLIIAVDHLDRPVIVLDPER 156 WTR L ++ E + LAL R VE A ++ + + + +LD +++ + Sbjct: 219 WTRSELKRLVDELRAKTLALEADIARRREVEDALRRSENKYRELFWSNLD-GIVISSLDG 277 Query: 157 HIVQCNRAFTEMFGYCISEASGMQPDTLLN-----IPEFPADNRIRLQQLLWKTARDQDE 211 ++ N AF + Y + + +L+ + F DN++ L D+ E Sbjct: 278 QVIDANPAFLNLMCYSLDQLKQQNFWSLVAEESEALERFNLDNKV-----LRFGYCDEFE 332 Query: 212 FLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQ--------LEGNILA 263 L R ++ + + D + + DI+E+R + E + Sbjct: 333 ATYLNRFDNQVPVSVKTVAMRDAFGRINAVWRMVRDISEKRAAEERVQLAAKVFENTVEG 392 Query: 264 AMCSSPPFH------EMGEIICRNIESVLNESHVSLFALRNGMPIH---WAS-SSHGAEI 313 M + EI VL + L + R+ P + W S + HG Sbjct: 393 IMITDADRRIRSVNRAFTEITGYTQHEVLGQKTSILSSGRHDEPFYEQMWQSIAEHG--- 449 Query: 314 QNAQSWSATI--RQRDGAPA----GILQIKTSSGAETSAFIERVADISQHMAALALEQEK 367 SW + R+++G I ++ S G E + ++ +D+++ AA Sbjct: 450 ----SWQGELWNRRKNGEVYPEWLAINAVRNSLG-EITHYVAIFSDLTERKAA------- 497 Query: 368 SRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGY 423 + I+ L FD +T LPNR ++ + ++ + AV + L+ +D + V +SLG+ Sbjct: 498 -DERIQFLAHFDVLTSLPNRIHMQDRVELAIHNAVRDNQRLALLLLDLDRFKTVNESLGH 556 Query: 424 AWADQALLEVVNRFREKLKPDQYLCRIEGTQFV-LVSLENDVSNITQIADELRNVVSKPI 482 + D L +R + + P + L R G +F+ L+ + +D A+ +R+V + PI Sbjct: 557 SAGDTLLQVAADRIKSVMAPGEMLARQGGDEFIILLPVISDPGEAALAAERVRDVFANPI 616 Query: 483 MIDDKPFPLTLSIGISYDLGKNRDY--LLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKE 540 + + +T SIGIS RDY L+ A AM + + +G N ++F++ +N +E Sbjct: 617 ELHNHVLTITPSIGISVYPDDGRDYETLVRNADAAMYHAKSSGRNSYKFYTADLNARARE 676 Query: 541 RLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEE 600 L + + L+ A+ ++ L YQPQ+ E+G + G EAL RW+ P G + P RFI +AEE Sbjct: 677 ILAIESQLRFALERDEFVLHYQPQVEMESGRIVGAEALIRWNHPSLGLLGPVRFIQVAEE 736 Query: 601 IGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGID 660 G I IG WVIAEA RQL EWR + L++NLSAL FR L QV A+ + G+ Sbjct: 737 RGFIVQIGNWVIAEATRQLVEWRRAGLPELTLAINLSALQFRQPDLALQVKQALESSGLP 796 Query: 661 GHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKID 720 GH L +E+TES++ME + I +++MG+ LS+DDFGTG+S LS L ++KID Sbjct: 797 GHALDIEVTESIIMEDAQATIQTIDNMKNMGLRLSIDDFGTGYSSLSYLKRFKADKLKID 856 Query: 721 KSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSR 780 +SFV + A+ AI ++ ++LN+ VVAEGVET EQ++ L + C +QGY ++ Sbjct: 857 RSFVRDIPQDADDSAIARAIINMAKNLNMQVVAEGVETMEQWQFLEQEGCDFVQGYLIAK 916 Query: 781 PLPAEEIPGWM--SSVLP 796 PLPA++ + S+LP Sbjct: 917 PLPADDFAELLHKDSLLP 934 >UniRef50_A6CPZ0 Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CPZ0_9BACI Length = 975 Score = 280 bits (716), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 151/436 (34%), Positives = 247/436 (56%), Gaps = 9/436 (2%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPV----VYLIGVDHIQDVID 419 EQ+K+ + I L FD TGLPNR ++ + +A V + +D + + D Sbjct: 530 EQKKTEEKITYLAYFDAETGLPNRIKFRELAEEFISRAKKKKRRIGVLFLDIDRFKLIND 589 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSN--ITQIADELRNV 477 +LG++ DQ L+E+ R + L YL R +F ++ + +V+N + Q+A+ + Sbjct: 590 TLGHSAGDQILIELAERIKNALPKGAYLGRFGSDKFTIL-ISKNVTNEKLKQVAELIAEN 648 Query: 478 VSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMN 535 + PI+ ++ F + SIG+ D G + LL A A+++ + NGG+ F++ MN Sbjct: 649 IQMPIIQGNQEFYIKASIGVGVYPDHGTDLADLLKNADTALNWAKSNGGDQIVFYTNEMN 708 Query: 536 EMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFI 595 M E++ + + L++A+ +L +VYQP + + G EAL RW+ P G V P FI Sbjct: 709 IMAMEKVKMESYLRKALEREELYIVYQPIVELNDKRVIGAEALLRWNHPYLGVVSPMEFI 768 Query: 596 PLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMH 655 PLAEE G I +IG WV+ EAC+Q EW+ + +SVN+SA F+ N+++ A+ Sbjct: 769 PLAEETGLIGSIGNWVLTEACKQAKEWQEKGFPDFYISVNVSANQFQQPSFTNEINHALK 828 Query: 656 AWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVT 715 G+ L +E+TES+M++H R++ L +GV +++DDFGTG+S L L LP+ Sbjct: 829 TSGLSAESLCLELTESVMIQHSGHTIDRMEELAALGVKIAIDDFGTGYSSLGYLKHLPLH 888 Query: 716 EIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQG 775 +KIDKSFV A+++A++ +G+ L + VV EG+ET EQ +L ++C + QG Sbjct: 889 VLKIDKSFVQNIEESSPDYAIVQAVSMMGKGLGMQVVVEGIETSEQMVLLSHLNCDLGQG 948 Query: 776 YFFSRPLPAEEIPGWM 791 YF SRP+ +E+ WM Sbjct: 949 YFISRPVFPDEMEKWM 964 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 161/452 (35%), Positives = 250/452 (55%), Gaps = 15/452 (3%) Query: 342 AETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA 401 E + FI D++ ++++ +E D +TGLPNRN L + L+ + KA Sbjct: 438 GEIAHFISVFNDVT--------DRKRYEAALEYQANHDDLTGLPNRNLLRDRLEHAITKA 489 Query: 402 VSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVL 457 V L+ +D + V D LG+ D + V +R + ++ + R+ G +F++ Sbjct: 490 TREHTKLAVLLLDLDQFKRVNDGLGHKIGDTLIQRVASRMSQCVRDSDTVARLGGDEFMI 549 Query: 458 VSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHN 514 +S + D +A +L + + I+ + SIGI+ G N D L A Sbjct: 550 LSTDIRDERAAATLAQKLLRQFRQKVAINGHEIIASASIGIAMFPKDGDNGDELFRNADT 609 Query: 515 AMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYG 574 AM + G NG+QF+S MN ++ERL L +L+ AI +QL L YQP++ +G + Sbjct: 610 AMYRAKDVGRNGFQFYSAEMNNRMRERLYLEQSLRNAIGLHQLSLWYQPKLDLASGSVKS 669 Query: 575 IEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSV 634 EAL RW P G + P FIP+AEE G I IG WVI EA RQLA+WR Q +++ Sbjct: 670 AEALIRWRHPQLGMISPGDFIPIAEETGLILPIGAWVIEEASRQLAKWRDQENQDIRVAI 729 Query: 635 NLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGL 694 N+SA +L +QV A+ + G+D LT+E+TE+ +M + +Q LR+MG+ + Sbjct: 730 NISAYQLSHGKLTDQVIQALDSLGLDPQSLTIEVTETAIMPQMDKAVCELQSLREMGIRV 789 Query: 695 SVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAE 754 ++DDFGTG+S L+ L P+ +KID+SFV ++ A+++ I ++ +LN+TVVAE Sbjct: 790 ALDDFGTGYSSLTYLKRFPIDILKIDRSFVSDIADDEESGAIVKTIINLAHNLNMTVVAE 849 Query: 755 GVETKEQFEMLRKIHCRVIQGYFFSRPLPAEE 786 GVET+ Q E LR C +QGY+F +PLP+EE Sbjct: 850 GVETEAQLEFLRTNGCDEVQGYYFCKPLPSEE 881 >UniRef50_C4KCC9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4KCC9_THASP Length = 748 Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 154/434 (35%), Positives = 247/434 (56%), Gaps = 12/434 (2%) Query: 369 RQHIEQLIQF----DPMTGLPNRNNLHNYLDDLVDKAV----SPVVYLIGVDHIQDVIDS 420 R+ E++I F D +T LPNR + L+ + +A + V I +D + V D+ Sbjct: 296 RKRAEEIISFQAYHDQLTHLPNRVLFKDRLELAIAQAQRRTGALAVMFIDIDRFKLVNDT 355 Query: 421 LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLENDVSNITQIADELRNVVS 479 G+A D L + +R L+ L R+ G +F VL+ N + IA ++ + ++ Sbjct: 356 FGHAEGDLLLRAIASRLSATLRRGDTLARLGGDEFTVLLPDINQPEDAEVIARKVLDALA 415 Query: 480 KPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEM 537 P+ + F T+S+GI+ G + L A AM ++++G N ++FF P +N Sbjct: 416 TPVRLSQGEFRATVSVGIALFPRDGTTAEDLTRHADAAMYQVKRSGKNAFRFFDPELNTR 475 Query: 538 VKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPL 597 ++R+ L L+ A++ +L L YQPQ+ T + G+EAL RW+ P G +PP+ FI + Sbjct: 476 HRDRIALENDLRGAVARGELDLHYQPQVSLATRGIVGLEALLRWNHPGLGAIPPATFIQV 535 Query: 598 AEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAW 657 AEE+G I I WV+ AC QLA W+++ + P +S+NLSA F+ + ++ + Sbjct: 536 AEEVGLISEISNWVLETACAQLARWQAEGVGAPRVSINLSACDFQRGDVVGRIRACLDRH 595 Query: 658 GIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEI 717 G+ L VEITE +MM+ +I +++ LR+ G+ +++DDFGTG+S L+ L PV+ + Sbjct: 596 GVAPSCLEVEITEGLMMDDTADIAAKVRALREAGISVAIDDFGTGYSALAYLQRFPVSTL 655 Query: 718 KIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYF 777 KID+SFV R L ++ AIT I + +L +VAEGVE EQ + LR + C V+QGY Sbjct: 656 KIDRSFV-RDLEGPMTNPIISAITGIARGFDLDLVAEGVENLEQADALRALGCEVMQGYL 714 Query: 778 FSRPLPAEEIPGWM 791 F+RP PA E+PGW+ Sbjct: 715 FARPAPAGEVPGWL 728 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 158/439 (35%), Positives = 239/439 (54%), Gaps = 7/439 (1%) Query: 365 QEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV----SPVVYLIGVDHIQDVIDS 420 ++++++HI +L FD +TGLPN + + L + A S V I +DH Q + D+ Sbjct: 600 RDEAQEHIRRLSHFDTLTGLPNSSLFADLLRQAIGNAQRSGESLSVMYIDIDHFQHINDT 659 Query: 421 LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSK 480 LG+ D+ L+E+ RFR L + L R+ G +F+++ V +A++L + Sbjct: 660 LGHRIGDRLLVEIAGRFRNALCAENTLARLGGDEFLILLPHAQVECAAHVAEKLIVAAAD 719 Query: 481 PIMIDDKPFPLTLSIGISYDLGKNRDY--LLSTAHNAMDYIRKNGGNGWQFFSPAMNEMV 538 P++I+D +T SIGI+ D+ LL A A + + +G N ++FF+P M Sbjct: 720 PMLIEDHEMLVTPSIGIAMYPADGEDFETLLQRADTATNRAKSDGRNTYRFFAPEMQLRS 779 Query: 539 KERLVLGAALKEAISNNQLKLVYQPQI-FAETGELYGIEALARWHDPLHGHVPPSRFIPL 597 L L AL+ A+ N+L L YQPQI + G + G+EAL RW P G V P+ FIP+ Sbjct: 780 AHTLRLETALRRALERNELVLHYQPQIDLVDFGRVAGVEALIRWQHPEFGLVSPAEFIPI 839 Query: 598 AEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAW 657 AE G I IG WV+ A QL W+ + + + VNLSA FR LP V+ + Sbjct: 840 AESTGLILPIGEWVMQTALLQLKAWQLAGLQLGQVGVNLSAHQFRQQNLPATVARILAEA 899 Query: 658 GIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEI 717 G+ L +E+TES MM+ + L GV +S+DDFGTG+S L+ L + ++ Sbjct: 900 GLPASCLELELTESAMMDDPVAAVAMMDALHRDGVRMSIDDFGTGYSSLNYLKRFRIDKL 959 Query: 718 KIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYF 777 KID+SFV + A++EAI S+ ++L +AEGVE EQ LR C+ +QGY Sbjct: 960 KIDQSFVRDLTQDPEGEAIVEAIVSLARTLRFRTIAEGVEKPEQLAFLRASGCQEVQGYL 1019 Query: 778 FSRPLPAEEIPGWMSSVLP 796 FSRPLP +E+ W+ + P Sbjct: 1020 FSRPLPPDELAVWLRAWRP 1038 >UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=B1XZW3_LEPCP Length = 1069 Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 170/495 (34%), Positives = 267/495 (53%), Gaps = 22/495 (4%) Query: 317 QSWSATIR--QRDGAPAGILQIKTSSGAETSAFI--ERVADISQHMAALAL------EQE 366 Q+W + + Q G+ G ++I +G + A++ V D + H++ +++ Sbjct: 556 QTWQSLVERVQTRGSWQGEVRICRRAGGDYPAWLLANAVRDRAGHVSHWVCTSIDITDRK 615 Query: 367 KSRQHIEQLIQFDPMTGLPNR----NNLHNYLDDLVDKAVSPVVYLIGVDHIQDVIDSLG 422 +S + I L + D +T LPNR L L V I +D +++ DSLG Sbjct: 616 ESERRIRFLAEHDVLTELPNRALCIERLRLALQQARRTGQKVAVLFIDLDRFKNINDSLG 675 Query: 423 YAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIA----DELRNVV 478 + D L V R + ++ + R+ G +FV+V N +++I ++A L V Sbjct: 676 HHVGDGLLRSVAQRLVDGVRAGDTVSRLGGDEFVVVL--NGLADIEEVAHVVEQRLIPRV 733 Query: 479 SKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNE 536 +P + ++ S+GIS D ++ D L+ A AM + G NG QFF+ MN+ Sbjct: 734 RQPHGVQGAEIHVSCSVGISVFPDDAQDIDELMRQADVAMYQAKAQGRNGAQFFTAEMNQ 793 Query: 537 MVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIP 596 + RL++ L+ A++ QL L YQP+I G + G+E L RWH P GHVPP RFIP Sbjct: 794 RAQARLMVENHLRSAVAQGQLSLHYQPRIHVADGRVAGVEGLLRWHSPELGHVPPDRFIP 853 Query: 597 LAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHA 656 +AEE G I IG WVI AC Q+ WR Q + A+S+NLSAL R L + + ++ Sbjct: 854 VAEETGLIIEIGAWVIEAACAQIERWRGQGLQEVAVSINLSALQLRDPGLLDVLRASLER 913 Query: 657 WGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTE 716 + QL +E+TES++M+ + LR++G+ LS+DDFGTG+S L+ L P+ + Sbjct: 914 HAVPPGQLELELTESILMDQVDAHLVTLHALRELGLRLSIDDFGTGYSSLNYLTRFPIDQ 973 Query: 717 IKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGY 776 +KID+SFV L + R LA+++AI +G +L L VVAEGVE + + + LR C +QGY Sbjct: 974 LKIDRSFVRDMLDDPRDLAIIKAIIGLGHTLGLKVVAEGVERELEVQALRAAGCDELQGY 1033 Query: 777 FFSRPLPAEEIPGWM 791 F+RP+ A+ W+ Sbjct: 1034 HFARPMAADTATAWL 1048 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 279 bits (713), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 167/472 (35%), Positives = 252/472 (53%), Gaps = 13/472 (2%) Query: 330 PAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNN 389 P I+Q + S + +ER+ Q + + ++ HI+ L +D +TGLPNR+ Sbjct: 622 PTRIVQFQIESEWQ-DGVLERIRGTVQDVTS----AREAEAHIQYLAHYDSLTGLPNRSA 676 Query: 390 LHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQ 445 N + A V + +D+ + V DSLG+ D+ L V R L+ + Sbjct: 677 WMNQARSALSLAQRHQHILAVLFLDLDNFKTVNDSLGHPVGDRLLAAVAQRLAHCLREED 736 Query: 446 YLCRIEGTQFV-LVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLG 502 R+ G +FV L+ + +A ++ + ++ P++IDD ++SIGIS G Sbjct: 737 SFARLGGDEFVALLPRVTRAEDAAAVARKMLDALATPVVIDDHELAPSVSIGISLFPSDG 796 Query: 503 KNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQ 562 + D LL A AM ++ G N +QFF P MN ERL+L AL+ AI N+L L YQ Sbjct: 797 TDVDTLLKHADTAMYGAKEVGRNNFQFFVPEMNTRALERLLLENALRRAIERNELTLHYQ 856 Query: 563 PQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEW 622 PQ+ A + G EAL RW P G VPP++FIP+AE+ G I +G WV+ EACRQ +W Sbjct: 857 PQVAATSDRPNGCEALVRWQHPDFGLVPPAQFIPIAEDSGLIVPLGEWVLREACRQQVKW 916 Query: 623 RSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFK 682 +H+ + VN+SAL FR + V + G + ++ +EITES +M+ + + Sbjct: 917 ARSGLHL-MVGVNISALQFRRADFVDSVVQVLAETGANPERIELEITESALMDASDALSR 975 Query: 683 RIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITS 742 R++ L +MG+ L++DDFGTG+S L+ L LP+ +KID+SFV + A+ A S Sbjct: 976 RLRELANMGLSLALDDFGTGYSSLAYLKRLPIGRLKIDRSFVKDLPGDPEDAAVTAATLS 1035 Query: 743 IGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 + + L L VVAEGVET Q + L C +QGY +SRPL WM + Sbjct: 1036 LARDLGLEVVAEGVETVAQRDFLVARGCHTLQGYLYSRPLDVAAFEAWMQAT 1087 >UniRef50_Q7NVN4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NVN4_CHRVO Length = 679 Score = 279 bits (713), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 164/437 (37%), Positives = 248/437 (56%), Gaps = 15/437 (3%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVID 419 E+ ++ + ++ L DP+TGLPNR L + P + I +D +DV D Sbjct: 234 ERRRAEERLDHLAHHDPLTGLPNRLLFQKRLSRALSVPDLPPYKLAMLFIDLDRFKDVND 293 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV--SLEN-DVSNITQIADELRN 476 +LG+ DQ L V R + ++ + L R+ G +F+ V S+EN D++ +A +L Sbjct: 294 TLGHYIGDQLLNAVAARLADSIRAEDMLARLGGDEFICVLESIENRDMA--ADVAGKLLA 351 Query: 477 VVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAM 534 + +P I+ L+ SIGIS+ + G + D LL A AM + G N Q +SP M Sbjct: 352 LFRQPFCINGNDLYLSASIGISFAGNDGADVDTLLRHADIAMYSAKNAGRNRCQHYSPQM 411 Query: 535 NEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRF 594 +E ++R+VL L++A+ N+++ + YQPQ+ A TG+L G EALARW P+ G VPP+RF Sbjct: 412 SEDAEQRVVLERQLRQALDNDEITVHYQPQVDAVTGKLVGAEALARWRHPILGMVPPARF 471 Query: 595 IPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAM 654 IP+AEE G I +G ++ ++ RQLA W +P++SVNLSA P V+ + Sbjct: 472 IPVAEECGLIVALGEQILEKSLRQLASWHEAGFPLPSVSVNLSARQLERQDFPQHVARLL 531 Query: 655 HAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPV 714 + ++ L +EITES++M + + + LR G+ LS+DDFGTG+S LS L LPV Sbjct: 532 KRYRLEPRHLELEITESVIMATEDAV-NILAELRAQGIRLSIDDFGTGYSSLSYLRQLPV 590 Query: 715 TEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQ 774 +K+D+SF+ K A++ AI ++ SL L VAEGVE Q E LR C +IQ Sbjct: 591 QVLKVDRSFI--LGIGKGGEAIVHAIMALSSSLGLETVAEGVEEASQLEFLRSAGCHIIQ 648 Query: 775 GYFFSRPLPAEEIP-GW 790 G+ ++ PLPAE GW Sbjct: 649 GFLYAAPLPAESFADGW 665 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 279 bits (713), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 167/443 (37%), Positives = 242/443 (54%), Gaps = 14/443 (3%) Query: 357 HMAALALEQEKSRQ---HIEQLIQFDPMTGLPNRNNLHNYLD-DLVDKA---VSPVVYLI 409 H AAL + + ++ I L +DP+TGLPNR L + L +L A V + Sbjct: 407 HYAALFTDISRLKETEARIRDLAYYDPLTGLPNRRLLDDRLQVELAHAARLRCRLAVMFV 466 Query: 410 GVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQ 469 +D + + DSLG+A D+ L+E+ R R L+ D + R+ G +F++V N++S + Sbjct: 467 DLDRFKRINDSLGHAVGDKLLVEIAARLRASLRDDDTVARMGGDEFLVVL--NNLSGPDE 524 Query: 470 IADELRNVVS---KPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGG 524 A R +V+ +P+ ++ + +T S+G++ D ++ D L+ A AM + G Sbjct: 525 AATMARRMVAELRRPVNVEGRELVVTTSVGVAVYPDDSRDADTLVKHADVAMYRAKDEGR 584 Query: 525 NGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDP 584 N +Q F PAMN ERL L AL A+ ++L+L +QP + AE GEL +EAL RW P Sbjct: 585 NSFQLFEPAMNARSLERLALETALHRALPRDELQLYFQPVMKAEGGELVAVEALLRWRHP 644 Query: 585 LHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSN 644 G V P+ FIPLAE+ G I IG WV+ AC W + VN+SA FR Sbjct: 645 DLGLVSPADFIPLAEDTGLIVPIGEWVLRSACEHHRRWCEAGGAPLHMMVNISARQFREE 704 Query: 645 QLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFS 704 V + G+ LT+E+TESM+M+ R+ LR +GV L++DDFGTG+S Sbjct: 705 GFAAMVGSVLAETGMTPGDLTLELTESMLMDDTDRALARLDHLRALGVCLAIDDFGTGYS 764 Query: 705 GLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEM 764 L+ L P+ E+KID+ FV R AL+ AI S+G SL L VVAEGVET ++ Sbjct: 765 SLAYLKRFPIDELKIDRLFVRGIDRNTRDAALVSAIVSLGHSLGLRVVAEGVETAAHLDV 824 Query: 765 LRKIHCRVIQGYFFSRPLPAEEI 787 LR+ C + QG+ FS PLP EE Sbjct: 825 LRRQGCDLAQGFHFSPPLPWEEF 847 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 279 bits (713), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 153/418 (36%), Positives = 243/418 (58%), Gaps = 5/418 (1%) Query: 378 FDPMTGLPNRNNLHNYLDDLVDKAV-SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNR 436 FDP+TGLPNR+ L + L +++++ + V +D +++ DSLG+ D L EV R Sbjct: 664 FDPLTGLPNRSLLFDRLQEVLNREPHNGAVLFCDLDRFKNINDSLGHTLGDAVLKEVARR 723 Query: 437 FREKLKPDQYLCRIEGTQFVLV-SLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSI 495 +++P +CR G +FVLV +D + Q+A++L VS PI++D +T S+ Sbjct: 724 LVARVRPGDTVCRYGGDEFVLVLPGLSDCVVLEQLAEQLLADVSSPILLDGLDLRVTPSL 783 Query: 496 GISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAIS 553 G++ G + D LL A A+ + + G N ++FF+ +++ V E L + L+ A+ Sbjct: 784 GVAVFPRDGNDCDALLRHADAALYHAKSRGRNTYRFFTREIDDRVSEYLHIEHGLRSALE 843 Query: 554 NNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIA 613 + +L YQPQ+ G + G+EAL RW P G + P RF+P+AEE G I IG WVI Sbjct: 844 RGEFELHYQPQVDMAFGRVVGVEALLRWKHPEQGMISPVRFVPIAEETGLIVPIGMWVIR 903 Query: 614 EACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMM 673 EACRQ WR + ++VNLS F S + + +A+ G+D L VE+TES++ Sbjct: 904 EACRQAMLWRRAGLRPMTMAVNLSGRQF-SRSVIEAIDEALADSGLDPRWLQVEVTESVI 962 Query: 674 MEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRI 733 ME E + ++ LR G+ ++VDDFGTG+S L+ L P+ ++KID+SF+ ++ Sbjct: 963 MEDTQEAYTVLEALRARGLTVAVDDFGTGYSSLAYLKRFPIDKLKIDRSFIRDIDLDEDN 1022 Query: 734 LALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 +++AI + +L + V+AEGVET+ Q++ LR+ C +QGY SRP PA + WM Sbjct: 1023 PVIVDAIIGMAHNLRIKVLAEGVETRAQWDYLRQQGCDEVQGYLVSRPQPAAALGQWM 1080 Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 14/154 (9%) Query: 104 RFALS----KVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAV---DHLDRPVIVLDPER 156 R ALS +V +G Y V+D + + + R+L+++ +H V + D Sbjct: 502 RLALSARTLQVVGQGH-YVTGSVQDVT---SLRRAERELMLSAQVFEHGSEAVFITDASH 557 Query: 157 HIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQ-QLLWKTARDQDEFLLL 215 I++ N AF + GY E G+ PD P I + +L +T R Q E + Sbjct: 558 RILRVNPAFEAITGYAAGEVLGLTPD--FRCVSSPGGTSISQRWELAEQTGRWQGEIVCR 615 Query: 216 TRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 R+GE + +++S V + + FSDI+ Sbjct: 616 RRSGEHYYEWSALSVVRHANGSVLYFIGQFSDIS 649 >UniRef50_C6QP03 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QP03_9BACI Length = 802 Score = 278 bits (712), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 189/692 (27%), Positives = 345/692 (49%), Gaps = 41/692 (5%) Query: 117 YYLALVRDASVEMA---QKEQTRQLIIA-VDHLDRPVIVLDPERHIVQCNRAFTEMFGYC 172 Y + RD + ++A Q E+ QL + ++ +++ D +++ NR + G+ Sbjct: 120 YMVCFTRDITEQIAREKQFEEIHQLFHSFLEQTHDAIVMFDLAGRVLRVNREAERLLGWS 179 Query: 173 ISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQD----EFLLLTRTGEKIWIKASI 228 E + I +F + +LQQ L K +R Q L+ + G+K+ + A++ Sbjct: 180 EKEVLAKK------IADFLPGHHGKLQQSLQKLSRGQTLTSVHLSLVRKDGKKVHVSANV 233 Query: 229 SPVY----DVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIES 284 +PV+ +A L +++ +D + R+ Q + + P + I + Sbjct: 234 TPVFGNDGTAVAGL-SILRDMTDFIQVREQLQQSEELYRKVIEFLP-----DPIIIQADG 287 Query: 285 VLNESHVSLFALRNGMPIHWASSSHGAEI-----QNAQSWSATIRQRDGAPAGILQIKTS 339 V++ + + + I + ++ Q W T + + + Sbjct: 288 VIHYMNPAGLEMVKAERIDFVKGKRLSDFLEKREQQENEWVLTSLCGEQKEVDVKAMSID 347 Query: 340 SGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD 399 +++ F+ + D+S EQ+ + IE + Q+DP+T LPNRN L L++L+ Sbjct: 348 YYGQSAQFL-IIRDLS--------EQKSKEKKIEFMAQYDPITVLPNRNYLREKLNELLL 398 Query: 400 KAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVS 459 + VS V L+ V+ Q + D LG++ D+ L EV R ++ +L RI +F +V Sbjct: 399 RDVSIAVLLVDVNRFQFINDFLGHSNGDELLKEVARRLKKIQSEQVFLSRIGDDEFAVVY 458 Query: 460 LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMD 517 N + + +L ++++P I + +T++IG+SY D ++ + LLS A A+ Sbjct: 459 TYNKKEEVNWLLKKLDRLLNEPYFIAGEKLNVTINIGVSYAHDADRSVETLLSNAGKAVY 518 Query: 518 YIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEA 577 Y + NG + + ++++ +R+ L L+ A+ NN+ L YQP++ ++G + +EA Sbjct: 519 YAKTNGVHRVVQYQSKLHDIFVKRIRLENDLQTALENNEFSLYYQPKVNVQSGTV-SVEA 577 Query: 578 LARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLS 637 L RW P G V P+ FIP+AEE IE IG+WV+ ++C L ++VNLS Sbjct: 578 LIRWKHPQLGMVSPAEFIPIAEETNMIERIGKWVLQQSCDDLKTLHKSGFSALKMAVNLS 637 Query: 638 ALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVD 697 A F + L VS+ + + + EITE+ +M+ E+ + +Q L++ G+ +++D Sbjct: 638 ARQFMDSSLKATVSNILTSADVPPSSFVFEITETTIMKEPNEVIRILQALKEQGIMIAID 697 Query: 698 DFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVE 757 DFG +S L+ L P+ +KID+SF+ ++ ++EAI S+ LNL+V AEGVE Sbjct: 698 DFGVSYSSLNYLNRFPIDAVKIDRSFIRDFHENRKGAEIVEAIISLAHRLNLSVTAEGVE 757 Query: 758 TKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPG 789 T+EQ L + C +QGY+FSRP+P E++P Sbjct: 758 TEEQVRFLLEKGCDEMQGYYFSRPVPLEQLPN 789 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 278 bits (712), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 164/447 (36%), Positives = 249/447 (55%), Gaps = 13/447 (2%) Query: 353 DISQHMAAL---ALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDD---LVDKAVSPV- 405 D+ +H A L E+ ++ + I Q+ +D +TGLPNR ++ L L + P+ Sbjct: 170 DLRRHAAMLEEEVAERSRAEERIRQMAYYDSLTGLPNRRLFNDRLRQSLALAQRHKRPLA 229 Query: 406 VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPD-QYLCRIEGTQFVL-VSLEND 463 V + +D + + D+LG+A D+ L+ V R R + + + R G +F++ +S +D Sbjct: 230 VMFLDLDRFKLINDTLGHAVGDRLLMAVAKRLRNCCRREGDTVARQGGDEFIINLSAISD 289 Query: 464 VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGIS---YDLGKNRDYLLSTAHNAMDYIR 520 V + +A ++ +V P +ID +T SIGIS +D G++ D L+ A AM + Sbjct: 290 VKDAFTVAQKIIDVFRTPFVIDGYELFITTSIGISVYPHD-GRSGDALVKNADVAMYRAK 348 Query: 521 KNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALAR 580 + G N Q F+P MN ERL L ++ A+ ++ L YQP++ E G++ +EAL R Sbjct: 349 EQGRNNCQLFAPEMNARAFERLSLENDMRRALERDEFVLHYQPKVNVEHGQIACMEALVR 408 Query: 581 WHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALH 640 W P G VPPSRFIPLAEE G I +G WV+ AC+Q W+ ++VNLS Sbjct: 409 WQHPSMGLVPPSRFIPLAEETGLIVPLGEWVLRTACQQNRAWQDAGYPTMQVAVNLSPRQ 468 Query: 641 FRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFG 700 R L V+ + G+ L +E+TES++M+ E + + L MGV +S+DDFG Sbjct: 469 LRQGDLSETVARVLAETGLAPGWLVIEVTESILMDDAEETIRTFRRLDRMGVRISIDDFG 528 Query: 701 TGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKE 760 TG+S L L PV +KID+SFV + A+ A+ S+ + LNL VVAEGVET E Sbjct: 529 TGYSSLHYLKKFPVHTLKIDRSFVREIASNPDDEAIAGAVISMAKGLNLGVVAEGVETVE 588 Query: 761 QFEMLRKIHCRVIQGYFFSRPLPAEEI 787 Q E+LR ++CR +QG+ FS P PAE+ Sbjct: 589 QMEVLRALNCRYMQGFLFSEPAPAEQF 615 >UniRef50_Q2SDR7 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SDR7_HAHCH Length = 636 Score = 278 bits (712), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 151/425 (35%), Positives = 239/425 (56%), Gaps = 9/425 (2%) Query: 379 DPMTGLPNRNNLHNYLDDLVDK----AVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVV 434 D +TGLPNR H L +++ V + +D +D+ DS G DQ L Sbjct: 209 DNLTGLPNRTLFHERLTHAIERRGVQQRDLAVMFLDLDGFKDINDSTGLETGDQLLQMAA 268 Query: 435 NRFREKLKPDQYLCRIEGTQFVLVSLENDVSNI--TQIADELRNVVSKPIMIDDKPFPLT 492 R +E L P+ + R G +F+++ LEN ++ T +++ LR+ + +P +DD+ F LT Sbjct: 269 QRIKETLPPETTVARYGGDEFIVL-LENIKTSFEATLVSERLRSAIDRPFTVDDQTFHLT 327 Query: 493 LSIGISYDLGKNRDY--LLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKE 550 SIGI+ +RD L+ A AM++ + G N QFF+ + RL + LK Sbjct: 328 CSIGIALYPTDSRDADALIRKADMAMNHAKSRGRNNCQFFADEFEILTSHRLRIRNNLKS 387 Query: 551 AISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRW 610 A+ N+ L+YQP+I + + G+EAL RW P V P+ FIP AEE G I +IG W Sbjct: 388 ALEKNEFNLLYQPKIALHSNMIIGVEALIRWRRPSGEVVSPAEFIPAAEENGLIIDIGNW 447 Query: 611 VIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITE 670 V EAC+QL W +N H ++++N+S HF+ + + ++ A+ + + L +E+TE Sbjct: 448 VTEEACKQLQRWGRENHHNFSVAINISPFHFQHADILSTITQALRRYSVRPELLEIELTE 507 Query: 671 SMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTE 730 S +ME + + LR +G+ SVDDFG G+S L+ L LPV +KIDK F+D Sbjct: 508 SALMEDIEHTIEILAELRKLGISCSVDDFGAGYSSLNYLKRLPVDTLKIDKMFIDDITKS 567 Query: 731 KRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 +R LAL++ + ++ L++ VVAEGVET+E +L++ C + QGY+FSRP+ + I Sbjct: 568 QRDLALVDTMINLAHHLDMLVVAEGVETEETVHLLKEKRCDLAQGYYFSRPVSGKVISEM 627 Query: 791 MSSVL 795 +++ L Sbjct: 628 LTTRL 632 >UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3E9L8_GEOLS Length = 631 Score = 278 bits (710), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 169/436 (38%), Positives = 250/436 (57%), Gaps = 16/436 (3%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVID 419 E+ + + IE+L FD +TGLPNR L + L L+ +A + I +D ++V D Sbjct: 181 ERRAAAEEIERLAFFDSLTGLPNRVLLKDRLAQLLTRAGRYNEMVAILFIDLDRFKEVND 240 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV---SLENDVSNITQIADELRN 476 +LG+ DQ L V R L+ + R+ G +FV++ E D + IA +L Sbjct: 241 TLGHGTGDQLLQVVSERLTACLRSCDTVARLGGDEFVVLLPGITERDC--VGDIAAKLLQ 298 Query: 477 VVSKPIMIDDKPFPLTLSIGISY---DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPA 533 + KP+ +D + + SIGIS D G + L A AM + ++ G N ++F++P Sbjct: 299 SLCKPVQLDAREVFTSGSIGISLWPID-GDSVSTLFKNADTAMYHAKEQGRNTYRFYTPQ 357 Query: 534 MNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSR 593 M+ E+L L L+ A+ +L L YQPQ+ ETG L G+EAL RW P G +PP R Sbjct: 358 MHATSMEQLTLSNDLRYALERGELHLCYQPQVSFETGGLIGVEALLRWIHPKLGMIPPDR 417 Query: 594 FIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDA 653 FIPLAE+ G I IG WV+ EACRQ W +Q + ++VN+SA FR + + V Sbjct: 418 FIPLAEDTGLIVPIGTWVLHEACRQAMMWVAQGLPSLRVAVNISAKQFRESDFSDTVKAV 477 Query: 654 MHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLP 713 + G+ + L +E+TE M++E+ T+ +Q L+DMGV L++DDFGTG+S LS L P Sbjct: 478 LQTTGLAPNLLELELTEGMLIENVTQTKLTLQSLKDMGVTLAIDDFGTGYSSLSYLKHFP 537 Query: 714 VTEIKIDKSFVDRCLTEKR--ILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCR 771 + +KIDKSFV + EK A++EA+ ++G SL LTV+AEGVE ++Q + L C Sbjct: 538 LDRLKIDKSFVKE-IAEKSGDAAAIVEAVVALGHSLKLTVIAEGVEQQDQVDFLHNRKCD 596 Query: 772 VIQGYFFSRPLPAEEI 787 +QGYFFSRPL + + Sbjct: 597 ELQGYFFSRPLTPQAL 612 >UniRef50_Q1JXT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXT2_DESAC Length = 868 Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 155/434 (35%), Positives = 247/434 (56%), Gaps = 10/434 (2%) Query: 368 SRQHIEQL---IQFDPMTGLPNRNNLHNYLDDL---VDKAVSPVVYL-IGVDHIQDVIDS 420 SR+ +QL +DP+T LPNR LH L D ++ + L + +DH + + ++ Sbjct: 427 SREQQDQLSFLTHYDPLTQLPNRTLLHLQLQDALAHIETGQDQLAILNLDLDHFKKINET 486 Query: 421 LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNI-TQIADELRNVVS 479 G+ + D+ L + R + L+ + + R+ +FV++ +++ + + I+ + + + Sbjct: 487 FGFDFGDKILRQTAGRLKHLLRLEDSIARMGADEFVIIIQGENIAELASSISRRILHRLG 546 Query: 480 KPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEM 537 P+ I+D+ +T S+GIS + G + + LL A A ++ G N FFS +++ Sbjct: 547 TPLNIEDQELIVTTSVGISLFPEDGADPETLLKNAEIARYAAKRQGRNRLHFFSSQLSDN 606 Query: 538 VKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPL 597 V+E LV+ +AL+ AI +L L YQPQ+ +G+L G+EAL RW P G VPP FIPL Sbjct: 607 VRENLVMESALRNAIERKELVLHYQPQLDLNSGDLVGVEALVRWQRPEIGLVPPGLFIPL 666 Query: 598 AEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAW 657 AEEIG I +IG WV+ EACRQ +W Q H+P ++VNL+ S LP QV + Sbjct: 667 AEEIGLINDIGLWVLEEACRQTIDWDRQGYHVPRMAVNLAVQQIESGHLPQQVLQILQYT 726 Query: 658 GIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEI 717 G+ +L +E+TES +M + + + MG+ L++DDFGTG+S L+ L LP+ + Sbjct: 727 GLPAQRLELEVTESAIMIEPKKAADALLEFQSMGIRLAIDDFGTGYSSLAYLKRLPLDRL 786 Query: 718 KIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYF 777 KID+SFV T + AI ++ SL + VAEG+E +Q E LR+ C + QGY Sbjct: 787 KIDRSFVMDIGTNAGDDIISRAIINLSNSLGMDTVAEGIENTDQLEFLRREGCEIGQGYL 846 Query: 778 FSRPLPAEEIPGWM 791 FS+PLPA+ + +M Sbjct: 847 FSKPLPADAVMAFM 860 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 173/483 (35%), Positives = 257/483 (53%), Gaps = 26/483 (5%) Query: 315 NAQSWSATIRQRDGAPAGILQIKTSSG---AETSAFIERVADISQHMAALALEQEKSRQH 371 +S+ +T+ DG+ I+ KT G + + DI+ E++++ + Sbjct: 186 GVESYDSTMIHTDGSIRDIIFSKTVFGNTDGSIGGIVGTILDIT--------ERKRAEEA 237 Query: 372 IEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPV----VYLIGVDHIQDVIDSLGYAWAD 427 I+QL FD +TGLPNR L + + L+ +A V + VD + V DSLG+A D Sbjct: 238 IQQLAYFDALTGLPNRTLLRDRVSQLLSQARREGGGFGVLHLDVDRFKGVNDSLGHACGD 297 Query: 428 QALLEVVNRFREKLKPDQYLCRIEGTQFVLV-----SLENDVSNITQIADELRNVVSKPI 482 L V R ++ + R+ +FV++ E+ V+ + +I +EL ++PI Sbjct: 298 VLLSTVAGRIASSIRESDTVARLGSDEFVVILPGVGHEEDVVAVVRKIVEEL----NRPI 353 Query: 483 MIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKE 540 +I T SIGI+ G + D LL A AM ++ GG+G+QF+S +N E Sbjct: 354 VIQGNDIFCTASIGIAIYPTDGSSADILLKNADMAMHKAKEFGGDGYQFYSSELNHRAME 413 Query: 541 RLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEE 600 RL L +L+ A+ + L YQP + +G + G+EAL RW P G V P+RFIPLAEE Sbjct: 414 RLTLETSLRRALERREFLLHYQPLLGIGSGRIVGVEALLRWDSPELGMVSPARFIPLAEE 473 Query: 601 IGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGID 660 G I IG WV+ AC QL +SVN+SA FR + V+ + A G+D Sbjct: 474 TGLIVPIGEWVLRSACEQLRALHELGYTELCVSVNVSARQFRHDGFCAMVAAVLAAVGLD 533 Query: 661 GHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKID 720 L +E+TES++ME ++ L+ MGV L++DDFGTG+S LS L P+ +KID Sbjct: 534 PRYLELELTESVIMERSETAKGILRKLKQMGVSLAIDDFGTGYSSLSYLKHFPIDRLKID 593 Query: 721 KSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSR 780 ++FV ++ A+ EAI ++ LNL VVAEGVET EQ L + C V+QGY +R Sbjct: 594 RTFVKEVTVDQDNAAIAEAIVALAHVLNLDVVAEGVETAEQLAFLAALRCDVVQGYHIAR 653 Query: 781 PLP 783 PLP Sbjct: 654 PLP 656 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 153/435 (35%), Positives = 239/435 (54%), Gaps = 7/435 (1%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV----SPVVYLIGVDHIQDVID 419 +++K+ I+QL +D +TGLPNR+ L + L + +AV + + +D + + D Sbjct: 470 DRKKAEDEIQQLAYYDTLTGLPNRSLLQDRLGQGIVQAVRDNRKVAIMFLDLDRFKSIND 529 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV-SLENDVSNITQIADELRNVV 478 +LG+ D L V R E ++ + RI G +FV++ S ++ +IA+++ + Sbjct: 530 TLGHVAGDSLLATVAERLTECVRETDTVARIGGDEFVIIISAIEHAEDLNKIAEKILAAI 589 Query: 479 SKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNE 536 SKP++++D+ +T SIGI+ + G + LL A AM + G N +Q+FS MN Sbjct: 590 SKPLVLNDQEIFITASIGIAIYPEDGTDVQGLLKNADLAMYKAKDQGKNAFQYFSREMNV 649 Query: 537 MVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIP 596 E L+L +L+ A+ N+ + YQPQ+ ++G L G+EAL RW P G +PPSRFIP Sbjct: 650 QALEHLILENSLRRALERNEFVIFYQPQMDLKSGRLVGMEALIRWQHPDLGLLPPSRFIP 709 Query: 597 LAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHA 656 +AEE G I IG W + AC + W ++VNL + FR + + + Sbjct: 710 MAEETGLILPIGEWALQTACAKNRAWMDAGFMPLRVAVNLCGIQFRQKKFIELIEAVLKK 769 Query: 657 WGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTE 716 G+ QL +E+TESM+M E + L++MGV L++DDFGTG+S LS L + P+ Sbjct: 770 TGLAPSQLELELTESMLMSKAEESTTVLHKLKEMGVSLAIDDFGTGYSSLSYLKNFPINR 829 Query: 717 IKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGY 776 +KID+SF+ A++ AI ++ +LNL V AEGVE Q E L +C IQGY Sbjct: 830 VKIDRSFIRDVPNNPDDTAIVSAIIAMAHNLNLKVTAEGVENHSQLEFLSTRNCNEIQGY 889 Query: 777 FFSRPLPAEEIPGWM 791 S PLP E ++ Sbjct: 890 LLSSPLPEAEFTRFL 904 >UniRef50_C7RQ11 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQ11_9PROT Length = 978 Score = 277 bits (708), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 184/555 (33%), Positives = 282/555 (50%), Gaps = 36/555 (6%) Query: 254 IRQLEGNILAAMCSSPPFHEM-----GEIICRNIESVLNESHVSLFALRNGMPIHWASSS 308 I L G I++ +P F EM E I RN + + H F WAS + Sbjct: 296 IADLTGRIISV---NPAFSEMTGYTAAEAIGRNPRLLQSGRHDRAF-----YQAMWASLT 347 Query: 309 HGAEIQNAQSWSATIRQRDG---APAGILQIKTSSGAETSAFIERVADISQHMAALALEQ 365 Q + W+ R+ DG L + + + ++ D+S+ Sbjct: 348 QAGHWQG-ELWN---RRADGEIYPQWATLSVVKDEHGQPTHYLAVFTDLSK--------L 395 Query: 366 EKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV----SPVVYLIGVDHIQDVIDSL 421 + + +E L +DP+T LPNR L + L +++A V +I +D ++V DSL Sbjct: 396 KHREEELEHLAHYDPLTDLPNRLLLRSLLQHALERAQRQGGKSAVLVINLDQFKNVNDSL 455 Query: 422 GYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFV-LVSLENDVSNITQIADELRNVVSK 480 G+A D+ LL V R + +L+ + + R+ +FV ++ D N IA +L ++ Sbjct: 456 GHALGDELLLGVTARLKARLRHEDVVGRLGADEFVAILEASQDAENAGSIAGDLLAALAP 515 Query: 481 P-IMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEM 537 P ++ D SIGIS GK + LL +A AM ++ GGN + F++ + Sbjct: 516 PFVLADGHETYARASIGISVFPQDGKGANDLLRSADVAMHRAKQRGGNQYAFYTGELGHG 575 Query: 538 VKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPL 597 +RL + AL+ A+ +L L YQP++ +G + G EAL RW P G VPP RFIPL Sbjct: 576 ALQRLEMETALRRALIQGELVLHYQPKLDLASGVIVGGEALLRWQRPGFGLVPPYRFIPL 635 Query: 598 AEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAW 657 AEE G I IG WVI E CRQ+ W ++VN+SA F +L ++ A+ Sbjct: 636 AEETGLIVPIGAWVINETCRQIRAWAEAGQPSVMVAVNVSARQFAGGELEAVLATALRKH 695 Query: 658 GIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEI 717 +D L +E+TESM+M + +R+ LR +GV +++DDFGTG+S LS L PV E+ Sbjct: 696 AVDPRMLGLELTESMLMAAPEQATERLDALRRVGVAVALDDFGTGYSSLSYLSRFPVDEL 755 Query: 718 KIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYF 777 KID+SF+ +++ + + A+ ++ + L VVAEGVET+ Q LRK C IQGY Sbjct: 756 KIDRSFITHIVSDPKAANIATAVIALAHRMALKVVAEGVETETQLSYLRKNRCDQIQGYL 815 Query: 778 FSRPLPAEEIPGWMS 792 FS P+PA+E +S Sbjct: 816 FSAPVPADEFATLVS 830 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 277 bits (708), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 205/698 (29%), Positives = 348/698 (49%), Gaps = 60/698 (8%) Query: 136 RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNR 195 RQL AV+ + + + D +R I+ N A EM GY + E G + P ++R Sbjct: 193 RQLKQAVETMQLGITITDLDRKIIYMNPAGAEMHGYQVEELLGQDVSMFV-----PPEHR 247 Query: 196 --IRLQQLL-WKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER 252 + L+++ WK + + T +W+ + I V + +V + DITE + Sbjct: 248 KPLTLERIKEWKGLIRESVNIRKDGTTFLVWLMSEI--VKNAKGEPFAIVTSCEDITERK 305 Query: 253 Q----IRQLEGNILAAMCSSPP----FHEMGEI------ICRNIESVLNES---HVSLFA 295 Q +R+ E + S+P + G++ R L+ES ++ Sbjct: 306 QAEEALRKSEERYRIVLESAPDPVVVYDTEGKVAYFNPAFSRVFGWTLDESIGRNIDFLP 365 Query: 296 LRNGMP---IHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVA 352 + N +P + + + G + +++ T +DG G+ SGA F + Sbjct: 366 VEN-VPENKLIFEKINCGKTLSGIETYCLT---KDGKKVGV----NISGA---GFFDNHD 414 Query: 353 DISQHMAALA--LEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP------ 404 + + L E++K+ + I+ L D +TGL NR + + L+D + ++ S Sbjct: 415 KLQGSIITLQDITERKKTEEEIKFLAYHDVLTGLLNRKSFYTRLEDELIRSYSYDGDRRR 474 Query: 405 ------VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV 458 ++ + VD + V D+LG+ D+ L V R + L+ Y+ R+ G +F ++ Sbjct: 475 IKGHKWALFFLDVDRFKYVNDTLGHDVGDELLKVVAVRLKNCLRKSDYIFRLGGDEFTII 534 Query: 459 SLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNA 515 + D +++ ++A ++R +++P I D +T+SIGIS D G + + L+ A A Sbjct: 535 LNDLTDDTDMAKVAQKIRKAIARPCRIKDHELYITVSIGISIYPDDGDDVETLVKNADIA 594 Query: 516 MDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGI 575 M Y K G++FF MN ER++L L+ A+ ++QL + YQP + T ++ G+ Sbjct: 595 M-YAAKEENQGYRFFIEEMNRKTLERMMLENNLRNALQHDQLIIYYQP-LVDSTNQIVGM 652 Query: 576 EALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVN 635 EAL RWH P G + PS+FIPLAEE G I IG+WV+ AC+Q +W ++VN Sbjct: 653 EALLRWHHPELGLISPSQFIPLAEETGLIVPIGKWVLRCACQQARKWHEMGYTRFYVAVN 712 Query: 636 LSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLS 695 LS FR L + + A + L +E+TES +MEH + ++++LR G+ S Sbjct: 713 LSVRQFREPDLVETIEQILEATDLPPDCLKLEVTESGIMEHPEQAIAKMKMLRAKGIHFS 772 Query: 696 VDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEG 755 +DDFGTG+S LS L P+ +KID+SFV T K +++ I ++ ++L + VAEG Sbjct: 773 IDDFGTGYSSLSYLKRFPIDTLKIDRSFVIDSTTNKDDQEIIKTIIAMARNLGMDTVAEG 832 Query: 756 VETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 VE KEQ + L C ++QGY+F RP+PAE+ + + Sbjct: 833 VEAKEQQDFLIHHGCHMMQGYYFGRPMPAEKFEDMLQT 870 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 63/250 (25%), Positives = 122/250 (48%), Gaps = 23/250 (9%) Query: 17 ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR-PAHPEYIRH 75 A+E +G + + + ++++ NPA ++ GY+ EE++G ++ M +P + R P E I+ Sbjct: 198 AVETMQLGITITDLDRKIIYMNPAGAEMHGYQVEELLGQDVSMFVPPEHRKPLTLERIKE 257 Query: 76 NREGGKARVEGMSRELQLEKKDGSK--IWTRFALSKVSAEGKVYYLALVRDASVEMAQKE 133 + G+ RE +KDG+ +W + K +A+G+ + + + E Q E Sbjct: 258 WK--------GLIRESVNIRKDGTTFLVWLMSEIVK-NAKGEPFAIVTSCEDITERKQAE 308 Query: 134 QT-----RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL--N 186 + + I ++ PV+V D E + N AF+ +FG+ + E+ G D L N Sbjct: 309 EALRKSEERYRIVLESAPDPVVVYDTEGKVAYFNPAFSRVFGWTLDESIGRNIDFLPVEN 368 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 +PE N++ +++ E LT+ G+K+ + S + +D LQ ++T Sbjct: 369 VPE----NKLIFEKINCGKTLSGIETYCLTKDGKKVGVNISGAGFFDNHDKLQGSIITLQ 424 Query: 247 DITEERQIRQ 256 DITE ++ + Sbjct: 425 DITERKKTEE 434 >UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n=2 Tax=Proteobacteria RepID=Q2W1Z2_MAGSA Length = 1510 Score = 277 bits (708), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 215/739 (29%), Positives = 350/739 (47%), Gaps = 54/739 (7%) Query: 98 GSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQ-KEQTRQ----LIIAVDHLDRPVIVL 152 G + + F +S G + LV ++ + +EQ R+ L+ ++H V + Sbjct: 787 GKRTFQVFVTPSMSMTGTPQSVVLVVVDHTDLVEAQEQIRESQERLLSIMNHSTSAVSLK 846 Query: 153 DPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQ--D 210 D N F E+FG E G + D L + R R +++ + + Q + Sbjct: 847 DAAGRYEFINMRFEELFGLSAEEVIG-KTDQQLFSRDIAQLLRSRDLEVMGQLSAIQHLE 905 Query: 211 EFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT----EERQIR------QLEGN 260 E + T K+W+ + P++D ++ + +D+T E Q+R G Sbjct: 906 EMVFPT---SKVWLDSVRFPIFDSNGVVRAVCSQSTDVTMKHHAEEQLRLAAKVFDRAGE 962 Query: 261 ILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQ--- 317 + SS + + CR + SH + +N P S HG + +A Sbjct: 963 AITITDSSGNIITVNDSFCR----ITGYSHQEVIG-KN--PRFLQSGKHGKDFYDAMWRS 1015 Query: 318 -----SWSATI--RQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQ 370 W I R+++G S E + + VA I ++A+ + S++ Sbjct: 1016 LIEQGCWQGEIFNRRKNGEIYPEWLTVNSVRDENGSVVNYVA-IFSDISAI----KSSQR 1070 Query: 371 HIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA----VSPVVYLIGVDHIQDVIDSLGYAWA 426 IE L D +TG+PNR+ L + L V +A V I +D+ + + DSLG+ Sbjct: 1071 RIEFLATHDELTGIPNRSLLMDRLKHAVAQAKRQKTKLAVLFIDLDNFKVINDSLGHDVG 1130 Query: 427 DQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDD 486 DQ L + R + ++ L R+ G +FV V + + + +A + + + I+D Sbjct: 1131 DQLLKQATERLKHCVRDSDTLARLGGDEFVAVLTDVSLEKVNSVAARIVDFLGASFSIND 1190 Query: 487 KPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVL 544 K ++ SIGIS D G++ LL A AM ++ G N +QFF+ M + +RL L Sbjct: 1191 KSLFVSASIGISVFPDDGQDSLTLLKHADTAMYRAKERGRNQYQFFADEMKVIALQRLTL 1250 Query: 545 GAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEI 604 L+ A+ ++ YQPQ+ TGE+ G EAL RW DP G V P+ FIP+AE G I Sbjct: 1251 ETGLRLALETKSFRMCYQPQVDIHTGEVVGAEALLRWRDPTLGEVSPAHFIPIAESCGLI 1310 Query: 605 ENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQL 664 IG V Q+A WR + + +P +++N+SA R +V + + GI + Sbjct: 1311 GAIGETVFTMVLEQIAYWREKGLTVPRIAINVSAHQLRDAGFAAKVGSWLDSSGISSELI 1370 Query: 665 TVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFV 724 +E+TES +ME + + + MG+ +S+DDFGTG+S LS L LP+ E+KID+SFV Sbjct: 1371 GIELTESALMERIDMVKEMLTSFDGMGMKVSIDDFGTGYSSLSYLKKLPIHELKIDRSFV 1430 Query: 725 DRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPA 784 D E+ ++ +AI + ++L + VVAEGVE++EQ +L++ C ++QGY F RPL Sbjct: 1431 DGIALERDDRSIAKAIIDMSRALGMRVVAEGVESEEQLGVLKEEGCDMVQGYLFHRPLSP 1490 Query: 785 EEIP-----GWMSSVLPLK 798 E G SS PLK Sbjct: 1491 EAFAKVIETGGKSSRKPLK 1509 >UniRef50_A6W3B3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W3B3_MARMS Length = 734 Score = 277 bits (708), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 156/426 (36%), Positives = 230/426 (53%), Gaps = 2/426 (0%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVDHIQDVIDSLGY 423 E +K+ +E L D +T LPNR L+ ++ + I +DH ++V D+LG+ Sbjct: 291 EIQKAHDQVEWLAHHDSLTKLPNRVALNKTFHKIIKPNTKIALLFIDLDHFKNVNDTLGH 350 Query: 424 AWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIM 483 + DQ LL V +R R + Y+ R G +F+++ ++ + + ++ +S Sbjct: 351 SIGDQLLLTVADRMRTLVNNIGYVARQGGDEFIILLPADNEECLIEKTCAIKEALSARYN 410 Query: 484 IDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKER 541 ID F +T SIG+S G++ D L A AM + + G N + FF+ M + Sbjct: 411 IDQHQFFITPSIGVSLYPRNGEDFDTLYQRADAAMYHAKHTGRNRYAFFTEEMQAISTRA 470 Query: 542 LVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEI 601 L LG AL +AI + L YQPQI TG++ G EAL RWH GHV P FIPLAEE Sbjct: 471 LTLGNALHDAIERQEFSLHYQPQISLITGKIIGAEALIRWHSLELGHVSPGEFIPLAEEN 530 Query: 602 GEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDG 661 G+I IG WV+ E RQL +W + I ++VNLS F+ N LP+ V ++ + + Sbjct: 531 GQILAIGEWVLRETARQLKQWLEEGITPVRIAVNLSYAQFQVNDLPSIVEAILNEYAVPA 590 Query: 662 HQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDK 721 L +E+TE + + ++ + +G+ S+DDFGTG+S LS L PV ++KID+ Sbjct: 591 QYLELELTERIATKDPEHTITILESFQQLGIHTSIDDFGTGYSSLSYLQRFPVYKLKIDQ 650 Query: 722 SFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRP 781 SFV T ++ I + Q L +T +AEGVETK Q EML I C IQGY+ SRP Sbjct: 651 SFVRNMTTNTNDQVIVGTIILLAQQLGMTTIAEGVETKAQLEMLYNIGCDDIQGYYISRP 710 Query: 782 LPAEEI 787 +PAEE Sbjct: 711 IPAEEF 716 >UniRef50_A0JVV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Arthrobacter sp. FB24 RepID=A0JVV3_ARTS2 Length = 821 Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 230/832 (27%), Positives = 381/832 (45%), Gaps = 75/832 (9%) Query: 13 IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNI-DMLIPRDLRPAH-- 69 + + Q+++G ++E + ++N A+E+L+G + + +G I D+ I P Sbjct: 14 LLLDEIGQSVIG---MDEQWRITYWNRASERLYGLRPGDALGMKITDLGIIGGAEPPGQR 70 Query: 70 ------PEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLAL 121 E + H R+ + EL + + G +S + V +A+ Sbjct: 71 ATVQEIAETLAHGRD--------WAGELWMRHRTGRDFPVHATVSPIRGRHTVPVAVVAI 122 Query: 122 VRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 +D + + R+L V+ +I D I N T MFG+ EA G Q Sbjct: 123 SKDITDRKHSEAILRRLSAMVESSGDAIIGADLTGAITSWNAGATRMFGWSSREAVG-QS 181 Query: 182 DTLLNIPE---FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 LL + F +D R+ + T R G I ++ ++SPVY Sbjct: 182 YRLLTTRDASGFDSDVAARIGGGTFVTGV---HARWRCRDGSLIDVELTVSPVYGPDGAQ 238 Query: 239 QNLVMTFSDITEERQIRQLE----------------GNILAAMCSSPPFH--EMGEIICR 280 D+TE ++++ G+I + + +H E II R Sbjct: 239 VGASAIARDVTEIQRLKAAAAAERERLLAAQEMAHVGSIEYIVATGETWHSEEFSRIIGR 298 Query: 281 ------NIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGA----P 330 E++L +H L + W S +GA ++ + I + DG Sbjct: 299 ADNALDTREAMLGLTHPEDQDLVRQV---WKSLENGA---DSADFEYRILKGDGELRWLH 352 Query: 331 AGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNL 390 + I K+ G F++ V DI+ E++ + Q +E + D +TGLPNR + Sbjct: 353 SRIRSAKSPDGRPLR-FLDTVLDIT--------ERKNAEQILEWRARHDALTGLPNRYMV 403 Query: 391 HNYLDDLVDKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRI 450 L +D+A PVV + VD + + D +G+ D L+ + R + ++ + R Sbjct: 404 TEVLQGCLDRASRPVVMFVDVDRFKLINDGIGHGAGDTILILLGERLKAAVRAGDTVARF 463 Query: 451 EGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGKNR-DYLL 509 G +FV+V + +A+ +R P +D + L +SIGI+ ++ + +L Sbjct: 464 GGDEFVVVCENLLMRGAKVLAERIRESTRLPFEVDGRRIYLNVSIGIALAGAEDTAELML 523 Query: 510 STAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAET 569 A +AM + GG+ + M RL L + L+ A+ +L L YQP I T Sbjct: 524 QGADSAMYRAKSAGGDSSAVYDVRMTGSAAGRLDLESDLRLALGRGELSLNYQPIIEIAT 583 Query: 570 GELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHI 629 G EAL RWH P+HG +PP FIP+AEE G I IG WV+ EA RQ+ EWR + Sbjct: 584 ETPVGFEALLRWHHPVHGSIPPDTFIPVAEETGLILPIGTWVLEEAFRQVQEWRRELCGA 643 Query: 630 PALS--VNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQIL 687 S VN+S + P+ V A+ A GID + +E+TE+++M+ + + L Sbjct: 644 ENFSAAVNVSGRQLVAKDFPDLVEAAILAAGIDPAAVHLEVTETVLMDQPDLPKETLHRL 703 Query: 688 RDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSL 747 +GVGLS+DDFGTG+S LS L L +KID++FV+ + ++E + + SL Sbjct: 704 SRLGVGLSIDDFGTGYSSLSYLKWLSARTLKIDRTFVEELGNDPHGATIIELVLGMAGSL 763 Query: 748 NLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI 799 +L V+AEGVET++Q LR++ + QG+ +S+PLPAE +P W+++ LP I Sbjct: 764 DLGVIAEGVETQDQLSELRRLRVPLAQGFLWSKPLPAERVPAWLAAALPDAI 815 >UniRef50_Q12PF1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Shewanella RepID=Q12PF1_SHEDO Length = 888 Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 157/443 (35%), Positives = 248/443 (55%), Gaps = 7/443 (1%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV----DKAVSPVVYLIGVDHIQDVID 419 EQ ++ +++L DP+T LPNR + +D+ + + V I VD + + D Sbjct: 445 EQRNTQAKLDKLSLHDPLTQLPNRAQFMSRIDNAIYYAKQEGTQLAVVFIDVDFFKHIND 504 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVS 479 SLG+ D L+E+ NR L P L R+ G +F L++ N+ I + + +V Sbjct: 505 SLGHVAGDTILVELANRLSSILHPGAVLSRLGGDEFSLLTNMASTDNLIAIVNRIFSVFE 564 Query: 480 KPIMIDD-KPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNE 536 P + + LT S+G++ GK+ D LL A AM +++G N + F++ AM + Sbjct: 565 APFSCSNGQSIRLTASMGLALYPSDGKDNDGLLRNADAAMHRAKQDGRNNYAFYTEAMTQ 624 Query: 537 MVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIP 596 L L +AL E + + LVYQP++ + E G EAL RW+DP+ G V P+ FIP Sbjct: 625 ESVRLLQLQSALHEGLKMQRFSLVYQPKVDLHSLETMGFEALLRWNDPILGSVSPAVFIP 684 Query: 597 LAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHA 656 +AE+ G I IG WV+ AC Q W SQ ++VN+++L + N + V + Sbjct: 685 IAEKTGLINEIGMWVLKTACEQGVRWLSQGKLFNRIAVNVASLQLQRNSFVDDVQQVLLD 744 Query: 657 WGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTE 716 G+ L +E+TES M+++ E ++ LR+MG+ L++DDFGTG+S LS L LP+ + Sbjct: 745 TGLPAQHLELEVTESCMLQNPAEAIIELKRLREMGITLAMDDFGTGYSSLSYLKKLPLDK 804 Query: 717 IKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGY 776 +KID+SF+ + + A+ +A+ ++G +LNL +VAEGVETKEQ E LR C QGY Sbjct: 805 LKIDRSFIKNIVQDANNAAIAKAVIALGHALNLQIVAEGVETKEQAEFLRLNDCEQAQGY 864 Query: 777 FFSRPLPAEEIPGWMSSVLPLKI 799 +FS P P+ E+ ++ + P+KI Sbjct: 865 YFSHPKPSHELDDFLENSPPIKI 887 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 22/231 (9%) Query: 35 MFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLE 94 +F N E+ WG +++++G DL + EG K + + E Sbjct: 232 VFCNRRVEQAWGRSKQDILGKT-------DLELFDEALAQRFIEGDKLAIAQGGPVIVAE 284 Query: 95 KKDGSKI----WTR-FALSKVSAEGK-VYYLALVRDASVEMAQKEQTRQLIIAVDHLDRP 148 KD ++ W F V+AEG+ V + + R+ + A +EQ + Sbjct: 285 CKDRDQLSQSTWLETFKTPAVTAEGELVGVIGVTRNIAKHKAAEEQLNLAATVFSNTVEG 344 Query: 149 VIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKT--- 205 V++ D + I + N AFT++ GY + E G P+ L + + + LW T Sbjct: 345 VVITDRKGFITEVNSAFTKITGYELDEVKGKNPNVLSS-----GHHDQLFFEKLWNTLLI 399 Query: 206 -ARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIR 255 R Q E + GE + +IS VYD + V F+D++E+R + Sbjct: 400 QGRWQGEIWNRRKNGEVYPQEITISAVYDDNDTIAYFVAVFTDVSEQRNTQ 450 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 210/759 (27%), Positives = 338/759 (44%), Gaps = 111/759 (14%) Query: 98 GSKIWTRFALS-KVSAEGKVYYLALVRDASVEMAQKEQTR-----------QLIIAVDHL 145 + +W R + E L +++D SV+ AQ + R Q + + HL Sbjct: 164 AAPVWLRLHYQVHLDEEAPGLVLGVLQDISVQKAQDDALREREQLFRGTFEQAAVGIAHL 223 Query: 146 DRPVIVLDPERHIVQCNRAFTEMFGYC-----------ISEASGMQPDTLLN-------I 187 LD H ++ N+ ++ GY I+ + D ++ I Sbjct: 224 G-----LDG--HWIRVNQRLCDILGYSREELLRLTLQDITHPADQDSDLVMTRRLLSGEI 276 Query: 188 PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSD 247 P F + R R R G+ +W + + + D + ++ D Sbjct: 277 PSFSIEKRYR------------------QRRGQLVWANLTAALMRDEGGRPEYFILVVED 318 Query: 248 ITEERQ---IRQLEGNILAAMCSSPPFHE-----------MGEIICRNIESVLNESHVSL 293 I+ +Q +QL + +M + GEI +E++L + Sbjct: 319 ISARKQSEEAQQLALTVFDSMLEGVIITDHHRRILAVNAAFGEITRYPVEALLGRT---- 374 Query: 294 FALRNGMPIHWASSSHGA--------EIQNAQSWSATI--RQRDGAP----AGILQIKTS 339 P W ++ A ++ + W + R+RDG P I ++ Sbjct: 375 -------PPLWRTAHQDAAFYRRIWRQLLASGRWEGELWHRKRDGTPFPLWLSISCVRDE 427 Query: 340 SGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRN----NLHNYLD 395 G ++ DISQ + S++ +E+L +DP+TGLPNR+ L + L+ Sbjct: 428 QG-RPRQYVFVFNDISQ--------LKDSQEQLERLAHYDPLTGLPNRHLALARLEHALE 478 Query: 396 DLVDKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF 455 A V I +D + + DSLG+ D+ L+ + R ++L+ + L R+ G +F Sbjct: 479 RARRHAFPLAVMFIDLDRFKTINDSLGHQAGDELLVAIAQRLHQRLRQEDTLARLGGDEF 538 Query: 456 VLVSLENDVSNITQIADELRNVVSKPIMIDDKPFP-LTLSIGISYDLGKNRDY--LLSTA 512 ++V E V + IA L VV +P + SIGIS G R L+ A Sbjct: 539 LVVIEEAPVQQVASIAHALLKVVDQPFGFSGGGEAYVGASIGISLYPGDGRSASELIRNA 598 Query: 513 HNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGEL 572 AM + G N ++F++ ++ ERL + +L+ A+ + L YQP + +G + Sbjct: 599 DAAMYLAKAQGSNAYRFYTESLTRAANERLSMETSLRRALRCEEFVLHYQPLVELASGRV 658 Query: 573 YGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPAL 632 G E L RW P VPPSRFIPLAEE G I +G WV+ EACRQ W + + L Sbjct: 659 LGAEVLVRWQPPGEALVPPSRFIPLAEETGLIVPLGDWVLHEACRQGKAWLDAGLPL-LL 717 Query: 633 SVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGV 692 +VNLS F + L QV A+ G+ QL +E+TE +ME + K + L+ +GV Sbjct: 718 AVNLSPRQFLRHDLVGQVRKALQGSGLPPAQLELELTEGALMEQAEQAVKTLHALKRLGV 777 Query: 693 GLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVV 752 L++DDFGTG+S L+ L P+ ++KID+SFV + ++ I ++ ++L L + Sbjct: 778 SLAIDDFGTGYSSLAYLKRFPLDKLKIDRSFVRDLPRDSSDAEIVTTIIAMVRNLKLEAL 837 Query: 753 AEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 AEGVET +Q LR++ C QGY FS PLPAE W+ Sbjct: 838 AEGVETPQQLAFLRQLGCDSGQGYLFSPPLPAEAFERWL 876 >UniRef50_Q2SG37 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SG37_HAHCH Length = 841 Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 165/447 (36%), Positives = 252/447 (56%), Gaps = 15/447 (3%) Query: 357 HMAALALEQEKSRQHIEQLIQF----DPMTGLPNRNNLHNYLDDLVDKA----VSPVVYL 408 HM L E+ RQ E I+F D +TGLPNR+ + + ++ A + Sbjct: 257 HMFVLRDITERRRQ--EAAIEFQATHDALTGLPNRSLFLDRVTQSINHARRNESRLALIF 314 Query: 409 IGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV--SLENDVSN 466 I +D + + D+LG+ D L + R +E + L R G +FVL+ +LE++ ++ Sbjct: 315 IDLDKFKLINDTLGHNAGDDLLRIMSKRLQECTRNCDTLARFGGDEFVLLVDNLESE-AD 373 Query: 467 ITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGG 524 +T +A L + VS P+++ + +T S+GIS + G N + L+ A AM +++G Sbjct: 374 LTHLAARLISSVSAPVLLLGQSHSITCSLGISSFPEDGDNVEVLMRHADIAMYRAKESGR 433 Query: 525 NGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDP 584 N +QFF+ M + + ERL L ++LK+A+ N++ L YQPQ+ TG++ G+EAL RW P Sbjct: 434 NSYQFFTHQMQDRLNERLKLESSLKQALENDEFVLHYQPQVDLSTGKIIGLEALIRWQSP 493 Query: 585 LHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSN 644 G VPP FIP AEE I IG WVI C++L WR Q + I +++N+SAL F Sbjct: 494 TLGLVPPGDFIPAAEEGRLISAIGEWVIFAVCKRLQSWRRQGLKIVPVAINISALQFMEQ 553 Query: 645 QLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFS 704 + V A++ + ++ L +E+TES+ M +Q L+D+GV LS+DDFGTG+S Sbjct: 554 KTEELVKQALNEYMVEPKYLELELTESLSMLDPVTSISLMQRLKDIGVSLSIDDFGTGYS 613 Query: 705 GLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEM 764 LS L PV ++KIDKSFV ++++AI + QSL L +AEG ET Q + Sbjct: 614 NLSYLKRFPVNKLKIDKSFVSGLTNNPDDYSIVKAIIRMSQSLGLKTIAEGAETAGQIAL 673 Query: 765 LRKIHCRVIQGYFFSRPLPAEEIPGWM 791 L +C IQG++FSRPLP EI + Sbjct: 674 LAAENCDAIQGFYFSRPLPEAEICAML 700 >UniRef50_D2LYI1 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LYI1_BACS4 Length = 774 Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 141/427 (33%), Positives = 248/427 (58%), Gaps = 7/427 (1%) Query: 367 KSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV----DKAVSPVVYLIGVDHIQDVIDSLG 422 +SR+ +E D +TGLPNR ++ L+ + + S + + +D + + D++G Sbjct: 348 QSRKEVEYRANHDILTGLPNRYHIEQLLEQEIVTCDENDQSLALMFMDLDRFKILNDTMG 407 Query: 423 YAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPI 482 + DQ L++ R ++ + + + R+ G +F+++S + + ++ IA ++ ++ P Sbjct: 408 HQIGDQLLIQTAIRLQQHVCENCTVGRLGGDEFLILSKDASIEKVSNIAKKILKDMANPF 467 Query: 483 MIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKE 540 +I+ K F + SIGIS G+ +D ++ A AM ++NGGN +QF++P ++ + Sbjct: 468 IINSKEFFTSPSIGISVYPKDGQTKDDIIKHADTAMYVAKENGGNNYQFYTPEPTNLLSK 527 Query: 541 RLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEE 600 + ++ L++A+ N + L YQPQ+ ++G+L G+EAL RW P G +PP FIP+AEE Sbjct: 528 KYIIENDLRKALKNEEFLLYYQPQVDLKSGDLVGLEALIRWQHPKLGLIPPMDFIPIAEE 587 Query: 601 IGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGID 660 G I +IG+W+I EACRQ +W+ ++VN+S FR + A+ +D Sbjct: 588 TGYINHIGKWLIKEACRQNKQWQQNGSFYIPVAVNVSPWQFRDKNFVENIKAALDETNLD 647 Query: 661 GHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKID 720 L +EITES MM H + ++ +++MG+ +++DDFGTG+S L+ + LP+ +KID Sbjct: 648 PKYLELEITES-MMHHFIDTIDKVHQVKEMGIKVAIDDFGTGYSSLNAIDQLPIDTLKID 706 Query: 721 KSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSR 780 +SF+ +T A+++ I +G +L+L +AEGVE +EQ L C QGY FS+ Sbjct: 707 RSFIRDMITNDSKAAIVKTIIDLGNNLHLNTIAEGVEYEEQATFLANQDCVKAQGYLFSK 766 Query: 781 PLPAEEI 787 PLP E++ Sbjct: 767 PLPPEQL 773 >UniRef50_D0J3T4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Burkholderiales RepID=D0J3T4_COMTE Length = 728 Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 157/423 (37%), Positives = 241/423 (56%), Gaps = 12/423 (2%) Query: 379 DPMTGLPNR----NNLHNYLDDLVDKAVSPV-----VYLIGVDHIQDVIDSLGYAWADQA 429 DP+T LPNR + L + L L S + + +D + + DS G+A DQ Sbjct: 285 DPLTNLPNRLLFEDRLIHALLRLERANRSRTKERLGILFVDLDGFKPINDSFGHAAGDQI 344 Query: 430 LLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLENDVSNITQIADELRNVVSKPIMIDDKP 488 L+ R + + + R+ G +F VL+ DV+ +A+ + +S+P + +K Sbjct: 345 LVSAAERLMAEARSSDTVARVGGDEFLVLLEDTQDVAACMAVANRILKALSQPFRLGNKE 404 Query: 489 FPLTLSIGI-SYDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAA 547 +T SIGI ++ +RD+L++ A AM ++NGGNG+ F P M E+L L Sbjct: 405 LQITCSIGIVAFPDHGDRDHLIANADAAMYAAKRNGGNGFAVFEPHMGSDASEQLELQND 464 Query: 548 LKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENI 607 L+ AI Q++L YQP+I +E G + G+EAL RW P G + P FIPLAE G I ++ Sbjct: 465 LRHAIQRGQMELHYQPKIDSERGNIIGVEALLRWAHPERGMIAPDIFIPLAERFGIINSL 524 Query: 608 GRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVE 667 G WVI EACRQLA WR + + +++NLS R + L ++++ + + QL E Sbjct: 525 GNWVIEEACRQLALWRDMGLQMR-VAINLSVHQLRESGLADRITQTLLRHDVQASQLLCE 583 Query: 668 ITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRC 727 ITES+ ME + I+ LRD+G+ LS+DDFGTG+S L+ L LP ++KID+SF+ Sbjct: 584 ITESVAMEDTQATQRAIEELRDIGIFLSIDDFGTGYSSLNYLRQLPAQQLKIDRSFIRDL 643 Query: 728 LTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 TE+ A++ A+ + +L L VVAEGVET Q ++L + C +QGYF++RP+PA+ + Sbjct: 644 ETEEDARAVVHAVVRLAHALGLRVVAEGVETAGQRDILIDMQCDELQGYFYARPMPADSL 703 Query: 788 PGW 790 W Sbjct: 704 LAW 706 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 167/464 (35%), Positives = 258/464 (55%), Gaps = 20/464 (4%) Query: 333 ILQIKT--SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNL 390 IL I T S S ++ + DISQ L+Q ++R +E L+ +DP+T LPNR + Sbjct: 601 ILTINTVADSQGRPSHYVGVMTDISQ------LKQSEAR--LEHLVHYDPLTNLPNRRLV 652 Query: 391 HNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQY 446 + L+ +++A V + +D + V DSLG+ D L + R E+++ D Sbjct: 653 QSRLEHALERADRQGGRVAVLFVDLDRFKTVNDSLGHPSGDVLLELLARRLSERVREDDT 712 Query: 447 LCRIEGTQFVLVSLEN--DVSNITQIADELRNVVSKPIMI-DDKPFPLTLSIGISY--DL 501 L R+ G +F LV LEN + +A+ L +++ +P + + + + SIGIS D Sbjct: 713 LARLGGDEF-LVLLENLQRPEDAAAVAESLLSLLQQPFHLPNGQELYVGASIGISLYPDD 771 Query: 502 GKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVY 561 G L+ A AM ++ G N ++F++P++ + +ERL L A L A+++ + L Y Sbjct: 772 GHTVTDLIQHADVAMYQAKEEGRNTYRFYTPSLTQTARERLGLEARLHRALASEEFVLHY 831 Query: 562 QPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAE 621 Q QI G L G EAL RWH G V P RFIPLAEE G I +G WV+ +AC Sbjct: 832 QAQIDMRDGRLIGCEALVRWHSATEGLVAPDRFIPLAEETGLIVPLGEWVLRQACADCQS 891 Query: 622 WRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIF 681 WR++ + ++VNLS RS L +V+ + G+ +L +E+TESM+M+ + Sbjct: 892 WRARGLTDLTVAVNLSGRQLRSPDLVERVTRVLRETGLPAERLKLELTESMIMDQREQAL 951 Query: 682 KRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAIT 741 +R++ L+ +GV LS+DDFGTG+S L+ L LP+ E+KID+ FV + + + I Sbjct: 952 ERLRALKALGVRLSIDDFGTGYSSLAYLKRLPIDELKIDRDFVRDIPEDSSDMEIAATII 1011 Query: 742 SIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAE 785 ++ ++L L V+AEGVET EQ + L + C QGY F RPLPAE Sbjct: 1012 AMARNLRLNVIAEGVETPEQCDFLIRQGCTAGQGYLFGRPLPAE 1055 >UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiatoa sp. PS RepID=A7BQZ3_9GAMM Length = 576 Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 156/429 (36%), Positives = 251/429 (58%), Gaps = 8/429 (1%) Query: 367 KSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLG 422 ++ + + L +DP+T LPNRN L L + +A + + +D+ Q + D +G Sbjct: 132 ETEEQLAYLANYDPLTKLPNRNLLLERLRQTLGRATRTHQDIAILALDLDNFQMINDGVG 191 Query: 423 YAWADQALLEVVNRFREKL-KPDQYLCRIEGTQFVLVS-LENDVSNITQIADELRNVVSK 480 + D+ L EV R + + K + R+ G +FV++ +N V +++++A L + +S+ Sbjct: 192 HDVGDKVLHEVAQRLTQTVSKIGATVARLSGDEFVVIEESDNLVKDVSEMAQGLLDNLSR 251 Query: 481 PIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMV 538 ++ID +T SIGIS G+ LL A AM + G N +QFF MN+ Sbjct: 252 SMVIDHHEMVVTASIGISVYPSDGEEAAILLKNADTAMARAKAAGKNTYQFFKAEMNKAA 311 Query: 539 KERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLA 598 ERL+L L++ +SNN+L L YQPQI +G+L G+EAL RW P G P +F+P+A Sbjct: 312 FERLMLENQLRKVLSNNELILYYQPQIELSSGQLVGMEALLRWQHPEFGICSPVKFVPVA 371 Query: 599 EEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWG 658 EE+G I IG WV+ AC+Q W+ +SVN+S+ F + L + +A+ Sbjct: 372 EEMGLIVPIGEWVLRTACQQNQTWQQLGFPPVRVSVNVSSRQFFRDNLLQIIKEALADSN 431 Query: 659 IDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIK 718 ++ L +E+TES++M ++ IF+ + +++MGV +++DDFGTG+S LS L P+ +K Sbjct: 432 LNPIYLELELTESVLMAEESGIFELLTEVQNMGVHIAIDDFGTGYSSLSYLKRFPLDVLK 491 Query: 719 IDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFF 778 ID+SFV ++ A+ AI ++ SL L+VVAEGVET+ Q L++ HC VIQGY+F Sbjct: 492 IDRSFVKDICSDGNDAAITTAIIAMAHSLGLSVVAEGVETQGQLTFLQQQHCDVIQGYYF 551 Query: 779 SRPLPAEEI 787 SRP+ +E++ Sbjct: 552 SRPICSEKM 560 >UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GA6_THICR Length = 815 Score = 276 bits (705), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 160/442 (36%), Positives = 255/442 (57%), Gaps = 24/442 (5%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV-----DKAVSPVVYLIGVDHIQDVI 418 E++K+ + I+ L +DP+T LPNR L + L + K V +++ I +D + + Sbjct: 374 ERKKAEEAIQNLAFYDPLTQLPNRRLLQDRLQQEMAVTERSKHVCALMF-IDLDDFKTLN 432 Query: 419 DSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV--SLEND----VSNITQIAD 472 D+LG+ D+ L +V R RE ++ + RI G +FVL+ SL++D ++ +A Sbjct: 433 DTLGHDTGDKLLRQVATRLRENVREFDTVARIGGDEFVLILPSLDDDWKDAATHAELVAQ 492 Query: 473 ELRNVVSKPIMIDDKPFPLTLSIGISYDLGKNR--DYLLSTAHNAMDYIRKNGGNGWQFF 530 ++ V++KP ++D P+ T SIG+ G + LL A AM + G N +F+ Sbjct: 493 KVLRVLNKPYLLDSTPYHSTPSIGVKLFSGHQETLEELLKHADLAMYQAKAKGRNTVRFY 552 Query: 531 SPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVP 590 M E+V + V+ A++++AI+ Q L YQPQI + G++ G EAL RW P G + Sbjct: 553 DTTMQEVVNAKSVMEASMRQAITGQQFVLFYQPQINS-NGQIIGAEALVRWRHPQKGLIA 611 Query: 591 PSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPA-----LSVNLSALHFRSNQ 645 P++FIPLAEE G I +IGRWV+ AC QL EW Q PA ++VN+SA F Sbjct: 612 PNKFIPLAEENGFILSIGRWVLQTACEQLVEWARQ----PATAQITMAVNVSARQFHQID 667 Query: 646 LPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSG 705 L +V + G + L +E+TES++++ ++ ++Q L+ +GV S+DDFGTG+S Sbjct: 668 LVEEVERIICQTGANPQLLKLELTESLLVKDIEDVVDKMQALKKLGVSFSLDDFGTGYSS 727 Query: 706 LSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEML 765 L+ L LP+ ++KID++FV + + A+ A+ ++ +S+ V+AEGVE EQ +ML Sbjct: 728 LAYLKRLPLDQLKIDQTFVRDIIDDSNDAAIARAVIALAKSMEFNVIAEGVENIEQHQML 787 Query: 766 RKIHCRVIQGYFFSRPLPAEEI 787 + CRV QGY F RP+P EE Sbjct: 788 IDMGCRVFQGYLFGRPVPIEEF 809 >UniRef50_Q2BL49 Sensory box/GGDEF domain/EAL domain protein n=2 Tax=cellular organisms RepID=Q2BL49_9GAMM Length = 1014 Score = 276 bits (705), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 165/478 (34%), Positives = 256/478 (53%), Gaps = 18/478 (3%) Query: 324 RQRDGAPAGI---LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDP 380 R+ +G P I + +S+ E S+++ +DIS E +++ Q +E+L +D Sbjct: 543 RKANGEPLPIWLSISALSSTKTEQSSYVAVFSDIS--------ELKEAEQKLEKLAHYDN 594 Query: 381 MTGLPNRNNLHNYLDDLVDKAV----SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNR 436 +T LPNR ++ ++ + +A + + +D + V D+ G+ DQ L+E R Sbjct: 595 LTSLPNRTLFYDRIESSLARAARNGKKTALLFVDIDRFKQVNDNHGHHTGDQLLVEAARR 654 Query: 437 FREKLKPDQYLCRIEGTQFVLVSLEND-VSNITQIADELRNVVSKPIMIDDKPFPLTLSI 495 ++ + R+ G +F ++ E D + + IA ++ + P +DDK + SI Sbjct: 655 ISAHIRLGDTVARLGGDEFTVILSELDGLDPVQDIARRIQKSLRDPFRLDDKEIFSSASI 714 Query: 496 GISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAIS 553 GI+ D G+N + LL A AM ++++ G N FF A+NE + R L LK AI+ Sbjct: 715 GIAMYPDDGRNAESLLKHADVAMYHVKERGRNDILFFDKAINEQAEARAQLEDNLKTAIN 774 Query: 554 NNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIA 613 QL +VYQP+ E+ EAL RW P G + P FIPLAE G I +GRWV+ Sbjct: 775 TQQLFMVYQPRFNISGTEILSAEALIRWKHPEQGFISPGDFIPLAESCGLIVELGRWVLM 834 Query: 614 EACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMM 673 +AC+ EW +SVNLSA + L + +A++ G+D L +EITE+M+ Sbjct: 835 QACQAAQEWNENTGQNTPVSVNLSARQLHDSSLLIDIENALNQTGLDPSLLELEITETMV 894 Query: 674 MEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRI 733 ++ + R++ +R +GV LSVDDFGTG+S L L LPV+ +KIDKSF+D Sbjct: 895 IQDMETVISRLEAIRTIGVRLSVDDFGTGYSSLIYLKRLPVSTVKIDKSFIDDVPGSSGS 954 Query: 734 LALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 L++A+ S+ SL L VVAEGVET+ Q L + HC IQGY ++P AE + M Sbjct: 955 ENLVKAVISMSHSLALNVVAEGVETEAQLSFLTENHCDEIQGYLLAKPDSAETLQRLM 1012 >UniRef50_D0J743 Diguanylate cyclase/phosphodiesterase n=3 Tax=Comamonas testosteroni RepID=D0J743_COMTE Length = 809 Score = 276 bits (705), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 158/438 (36%), Positives = 248/438 (56%), Gaps = 10/438 (2%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD----KAVSPVVYLIGVDHIQDVID 419 E++++ + +E+L FD +TGLPNR + + L+D + V + +D +++ D Sbjct: 372 ERKRTERRMEKLAFFDALTGLPNRFHGIDLAQRLLDIAGQRGQQATVLFVDLDRFKEIND 431 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVS 479 S G+ D L EV RF L + + R+ G +F+ V + ++ +A ++ + ++ Sbjct: 432 SQGHLVGDNLLAEVARRFERTLGGEGVVARLGGDEFMFVHTLAEGNDTMALAHQVCSTLA 491 Query: 480 KPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEM 537 P+ +DD F + S+G++ G + D LL A AM + GG Q + M Sbjct: 492 SPMRVDDLCFEVGASVGVALYPTHGHSVDELLQRADIAMYQAKTQGGGNCQIYDAQMGHR 551 Query: 538 VKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPL 597 ++ R+ LGA L+EA++ ++L+L +QP+I ++ LYG+EALARWHD G V P+ FI + Sbjct: 552 LQRRIALGAKLEEALAQSRLELHFQPKIALDSYALYGVEALARWHDEEWGWVSPAEFISV 611 Query: 598 AEEIGEIENIGRWVIAEACRQLAEWRSQNI-HIPALSVNLSALHFRSNQLPNQVSDAMHA 656 AEE G I +G W + A RQ W S I P ++VN+SA S+ + M A Sbjct: 612 AEERGLIIALGDWSLDAAARQWRAWSSAGIAQPPVIAVNVSAAQMMSDSFSERALAIMRA 671 Query: 657 WGIDGHQLTVEITESMMMEHDTEIFKRIQI-LRDMGVGLSVDDFGTGFSGLSRLVSLPVT 715 G+ + +EITES +M HD KR+ L + G LS+DDFGTG+S L+RL S PV+ Sbjct: 672 HGVSPRCIELEITESALM-HDPAKAKRVASQLVEQGFTLSIDDFGTGYSSLARLQSFPVS 730 Query: 716 EIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQG 775 +KID SFV L+E LA++ A+ + +L L VAEGVET+ Q + LR +HC +QG Sbjct: 731 RLKIDMSFVRGMLSEPGSLAIVTAVIGLAHALKLRTVAEGVETQSQLDKLRDLHCDEVQG 790 Query: 776 YFFSRPLPAEEIP-GWMS 792 Y FS+ +PA E+ W++ Sbjct: 791 YLFSKAVPAAELARDWLT 808 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 275 bits (704), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 212/680 (31%), Positives = 332/680 (48%), Gaps = 60/680 (8%) Query: 149 VIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTA-- 206 + V D V N A+ ++ G + + G T ++ P D+R R+ L W+ A Sbjct: 152 IFVSDIHGECVYTNAAYHKISGLNLEQTLG----TNWSMAIHP-DDRQRVL-LEWRAAAL 205 Query: 207 ---RDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITE----------ERQ 253 Q E L G +W + + + + D L HL+ V T DI+E E++ Sbjct: 206 GEATFQTEARFLRADGSIVWARLNAAAMLDGL-HLRGHVQTVEDISERKITEDALFEEKE 264 Query: 254 IRQLEGNILAAMCSSPPFHEMGEIICRNI----------ESVLNESHVSLFALRNGMPIH 303 Q+ N + + G++ N+ E+ + + +F + NG Sbjct: 265 RAQVTLNSIGDAVLTTNLK--GDVTYLNLVAEMMTGWPREAAIGQPLSEVFRILNGTTRE 322 Query: 304 WASSSHGAEIQNAQSWS----ATIRQRDGAPAGI----LQIKTSSGAETSAFIERVADIS 355 A + I+ ++ + + RDG A I I G A I D+S Sbjct: 323 VAPNPAQLAIRENRTVGLAADSILIHRDGLEAAIEDSAAPIHNRDGQVAGAVIV-FHDVS 381 Query: 356 QHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA----VSPVVYLIGV 411 + A +AL+ + L Q D +TGLPNR L L + +A + + + Sbjct: 382 ESRA-MALK-------MAHLAQHDFLTGLPNRALLTERLSRAIGQARRHNKRVGMLFLDL 433 Query: 412 DHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQI 470 D+ + + DSLG+A DQ L +V R ++ +CR G +FV++ E + I Sbjct: 434 DYFKHINDSLGHAVGDQLLQQVAERLIVCIRDTDTVCRQGGDEFVILLAEIEQARDAAPI 493 Query: 471 ADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQ 528 A++L ++P +I ++LSIGIS D G + D ++ A AM + + NG N +Q Sbjct: 494 AEKLLAAFAEPCLIAGNELHVSLSIGISIYPDDGMDADTVMKNADTAMYHAKANGRNNYQ 553 Query: 529 FFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGH 588 FF+ MN RL + L+ A+ + L YQP+I +G + G EAL RW DP HG Sbjct: 554 FFTTEMNTRAVRRLFIEGNLRRALRQGEFMLYYQPKIDLASGMMIGSEALIRWQDPEHGL 613 Query: 589 VPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPN 648 V P +F+P+AEE G I IG WV+ EACRQ+ W+ + +SVN+SA+ FR Sbjct: 614 VYPKQFVPIAEESGLIVPIGSWVLREACRQVRAWQESGLVAVPVSVNISAVEFRHKDFLE 673 Query: 649 QVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRI-QILRDMGVGLSVDDFGTGFSGLS 707 V+ + G+ L +E+TES++M HD E + + L+ MG+ L++DDFGTG+S LS Sbjct: 674 GVALILKETGMLPSYLELELTESILM-HDAESSATVLEALKTMGMQLAIDDFGTGYSSLS 732 Query: 708 RLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRK 767 L P+ +KID+SFV + +++ A+ +G++L VVAEGVET+EQ LR Sbjct: 733 YLKRFPINTLKIDQSFVHDIAIDPDDASIVGAMIGMGKNLKQRVVAEGVETEEQLAFLRT 792 Query: 768 IHCRVIQGYFFSRPLPAEEI 787 +HC QG+ F RPLPA+E Sbjct: 793 LHCDEGQGFLFGRPLPADEF 812 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 275 bits (704), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 208/686 (30%), Positives = 326/686 (47%), Gaps = 43/686 (6%) Query: 136 RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNR 195 R+L AV+ V + D + I N +F + GY +EA G P + + A Sbjct: 146 RRLSQAVEQAADSVFITDRQGTIQYVNPSFERLTGYSAAEAIGRTPALIKSDRHDDA--- 202 Query: 196 IRLQQLLWKT---ARDQDEFLLLTRT-GEKIWIKASISPVYDVLAHLQNLVMTFSDITEE 251 LW T R E L+ R G + + +I+P++D + V T D+T+ Sbjct: 203 --FFHKLWDTILAGRIFQETLVNRRKDGGLFYEEKTIAPLFDEGRGIAGFVSTGRDVTDR 260 Query: 252 RQIRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNESHVSLFALRNGMPIH-- 303 + Q G +L + ++ F + E + R +VL + + R+ H Sbjct: 261 IRDEQTRGQLLEILEATTDFVAIIEGDGRLRYLNRAGRAVLGLTATEDVSSRHIAQCHPE 320 Query: 304 WASSSHGAEI----QNAQSWSATIRQR--DGAPAGILQIKTSSGA--ETSAFIERVA-DI 354 WA+ E + +W I R DG + Q+ + G E F +A DI Sbjct: 321 WATHRLLMEAFPTARRDGAWQGEIAARLADGREIPVSQVVLAHGGANEMPEFFSTIARDI 380 Query: 355 SQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIG 410 ++ EQE RQ D +TGLPNR L + ++ +V + V + Sbjct: 381 TERKH---FEQELRRQATH-----DALTGLPNRILLEDQIEAVVAHSARSHKLASVLFLD 432 Query: 411 VDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQ 469 +D+ + + +SLG+A D L R R+ ++P + R G +F +V + + V NI Sbjct: 433 IDNFKRINESLGHAAGDAMLRHAAQRLRDCVRPTDVVARYGGDEFTIVLGDLSHVDNIPA 492 Query: 470 IADELRNVVSKPIMIDDKPFPLTLSIGIS---YDLGKNRDYLLSTAHNAMDYIRKNGGNG 526 I ++R P++I + + S+G+S +D G + LL A AM + +G N Sbjct: 493 ILHKVRAAFETPLVISGQEVYASFSVGVSVYPHD-GDDGATLLKNADTAMYRSKASGRNR 551 Query: 527 WQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLH 586 +QF++P MN +E L L L+ A+ + +L YQPQ+ + G+EAL RW P Sbjct: 552 YQFYAPEMNARGQELLSLETDLRRALDRGEFRLHYQPQLDLRDNRIAGVEALLRWKHPRD 611 Query: 587 GHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQL 646 G + P F+PL E+ G I +G WV+ AC Q R + +SVN+SA FR + L Sbjct: 612 GVIAPGDFVPLLEDTGLIVPVGEWVLRNACTQYRACRESGVAPVRISVNVSARQFREDTL 671 Query: 647 PNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGL 706 QV + + H L +EITES M+ + L +GV L++DDFGTG+S L Sbjct: 672 LRQVEQVLREECMPPHHLELEITESTAMQDVAATGDILAALDALGVRLAIDDFGTGYSSL 731 Query: 707 SRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLR 766 + L P+ +KID++F+ + I A+ EA S+G L L VVAEGVET EQ LR Sbjct: 732 AYLKRFPLDALKIDQAFIRDAPRDANIAAIAEASISLGHKLGLEVVAEGVETAEQLAFLR 791 Query: 767 KIHCRVIQGYFFSRPLPAEEIPGWMS 792 + C +IQG+ FSRPLPA+ + +++ Sbjct: 792 RRACDLIQGFHFSRPLPADALTPFLA 817 >UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=C7QU83_CYAP0 Length = 1514 Score = 275 bits (704), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 155/439 (35%), Positives = 249/439 (56%), Gaps = 9/439 (2%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVID 419 E++ S++ + + D +T LPNR L LD + +A V I +D + + D Sbjct: 1071 ERKTSQERLNYMAHHDHLTDLPNRLLLKARLDQSIQQATRKRTKLAVVFIDLDRFKHIND 1130 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN--DVSNITQIADELRNV 477 S+G+A D L ++ R R+ L+ + RI G +FV V LE+ D+ + + + +L V Sbjct: 1131 SMGHAAGDALLQQLAQRLRQVLRSSDTVARISGDEFVAV-LEDIEDIQHASMVVAKLMTV 1189 Query: 478 VSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMN 535 +P ++ + +T S+G+S D G + LL A +AM ++ G N + F++ M Sbjct: 1190 FEEPFPLEGQIIHMTSSMGLSLFPDDGMDTAILLRNADSAMYRAKEEGRNTYCFYAEEMT 1249 Query: 536 EMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFI 595 E ++ AL+ A+ N+ LVYQPQI + G+E L RWH P G V P++FI Sbjct: 1250 SAAFEYVLFENALRGALKRNEFYLVYQPQIDLSSHRWVGMEVLLRWHHPELGIVSPAQFI 1309 Query: 596 PLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMH 655 P+AE+ G I+ IG WV+ AC Q W Q I ++VN++A + N + V DA+ Sbjct: 1310 PIAEQSGLIQEIGTWVLYRACCQAKTWLDQGIDFGHIAVNVAAPQIQQNNFVHLVQDALD 1369 Query: 656 AWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVT 715 + G+ L +E+TE ++M + K++++L+DMG+ L++DDFGTG+S LS L LP+ Sbjct: 1370 SSGLPSPHLELELTEGLVMHQTEDRIKQLEVLQDMGIYLAIDDFGTGYSSLSYLKRLPIN 1429 Query: 716 EIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQG 775 ++KIDKSFV + +A+ EA+ ++G++LNL ++AEGVE + Q LR+ C QG Sbjct: 1430 KLKIDKSFVRDIPHDTNDMAISEAVIALGKALNLRIIAEGVEQEIQATFLREKGCHEAQG 1489 Query: 776 YFFSRPLPAEEIPGWMSSV 794 Y +S+PLP EEI + V Sbjct: 1490 YLYSKPLPPEEITQLFAEV 1508 >UniRef50_A1WT40 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Halorhodospira halophila SL1 RepID=A1WT40_HALHL Length = 836 Score = 275 bits (704), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 161/453 (35%), Positives = 253/453 (55%), Gaps = 14/453 (3%) Query: 346 AFIERVADISQHMAALA-LEQEKSRQ-HIEQLIQFDPMTGLPNR----NNLHNYLDDLVD 399 A + ++ ++A LA + + K Q +E+++ DP+TGLPNR + LH L Sbjct: 360 AIYDDAGHLTHYLAVLADISRLKEYQSQLERIMHSDPLTGLPNRLVFQDRLHQALVANQK 419 Query: 400 KAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLV 458 + V + ++ ++ + SLG+A D L ++ R R L + + R+ G +F VL+ Sbjct: 420 QTGFFAVLSLDLNDLKAINYSLGHAVGDAILQQLAERLRNALCEEHTVARLGGDEFGVLL 479 Query: 459 SLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY----DLGKNRDYLLSTAHN 514 D S + I ++L + +P I D+ P+ SIGI+ D G L A+ Sbjct: 480 LGVRDASEVAAITEDLSKGLDEPFQIADRAIPIAASIGIAVYPEQDAGAAD--LFQQANA 537 Query: 515 AMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYG 574 AM ++ G + ++FFS + E +ER+ LG+ L+EA++ L+L YQPQI +G G Sbjct: 538 AMHQAKREGVS-YRFFSEDLTEQARERVQLGSELREALNQGALELHYQPQIDLSSGAWVG 596 Query: 575 IEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSV 634 +EAL RWH P+ G + P RFIP+AE IG + +G WV+ +ACRQ W L V Sbjct: 597 LEALIRWHHPVQGWISPERFIPVAERIGLVTTLGAWVLEQACRQGRIWLDAGFEFGRLGV 656 Query: 635 NLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGL 694 N +A + L +V A+ + L +E+TE ++++ D E+ +++Q+LR+ GV + Sbjct: 657 NFAAPELSAPDLAERVLAALDRARLPARYLEIEVTERLLVDPDPEVIQQLQLLRNHGVTV 716 Query: 695 SVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAE 754 ++DDFGTG+S LS L LPV +KID+SFVD ++R LA+ +AI +G++L T++AE Sbjct: 717 ALDDFGTGYSALSYLRDLPVDRLKIDRSFVDGLPDDERTLAIAQAIAGLGRNLGFTIIAE 776 Query: 755 GVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 GVET Q E L I C QG+ F RP P I Sbjct: 777 GVETPAQREALIGIGCPWAQGFLFGRPAPVAGI 809 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 51/262 (19%), Positives = 98/262 (37%), Gaps = 45/262 (17%) Query: 18 LEQNMM-GAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHN 76 L +NM G +++ + V + NP+A L+ +IG I + I Sbjct: 170 LFENMTEGVLVVTPDGTVRYANPSAANLFARDSTALIGAVIGLPI--------------- 214 Query: 77 REGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTR 136 GG ++E+ L G + ++ + +L +RD + + + R Sbjct: 215 --GGPD-----AQEIGLRSPAGELRTVEMRVREIRWHEQPAHLLNLRDVTERKHIETELR 267 Query: 137 QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA---------SGMQPDTLLNI 187 + I + ++V D E+ ++ N AFTEM GY E SG ++ Sbjct: 268 RAAIVFEEAHEAILVTDAEQRVITANPAFTEMTGYTEQEVLGKDLALLRSGFHDESFYTA 327 Query: 188 PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSD 247 + + +W RD F L ++ +YD HL + + +D Sbjct: 328 IDDALAKQGYWTGEMWNRCRDGTTFATLV----------TVRAIYDDAGHLTHYLAVLAD 377 Query: 248 ITEERQIRQLEGNILAAMCSSP 269 I+ ++++ + + M S P Sbjct: 378 IS---RLKEYQSQLERIMHSDP 396 >UniRef50_B6BGA2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGA2_9PROT Length = 802 Score = 275 bits (704), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 198/613 (32%), Positives = 315/613 (51%), Gaps = 52/613 (8%) Query: 214 LLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHE 273 ++ + GE +++ +D ++ + T DIT+++ I Q E M +S F + Sbjct: 208 IVRKNGEVGFVEERCEHEFDNDGNVLRSIGTVHDITKQK-IAQNE-----LMLASEVFSK 261 Query: 274 M--GEIICRNIESVL--NESHVSLFALRN----GM-PIHWASSSHGAEI---------QN 315 M G +I +S++ NES + N GM P ++S H QN Sbjct: 262 MSDGVVITDANQSIIKINESFTKITGYTNEELIGMTPKAFSSGWHDEAFYKKMWDDIKQN 321 Query: 316 AQSWSATIRQRDG------APAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSR 369 Q WS I R A I+ + G T+ +I DIS+ EQEK Sbjct: 322 GQ-WSGEIIDRKKSSERYIAEMNIIALHNDDGILTN-YISITNDISKKK-----EQEKL- 373 Query: 370 QHIEQLIQFDPMTGLPNRNNLHNYLDDLV------DKAVSPVVYLIGVDHIQDVIDSLGY 423 I L FD +T LPNR + + DK ++ + I +D+ ++V D+LG+ Sbjct: 374 --IHNLAYFDSLTDLPNRVLFEERVVSRIPFSKRHDKKMA--LLFIDMDNFKNVNDTLGH 429 Query: 424 AWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLENDVSNITQIADELRNVVSKPI 482 D L+EV N + ++ L R+ G +F VL+ N + +I IA+++ + P+ Sbjct: 430 FMGDMFLIEVSNIIKNSIREQDTLARLGGDEFTVLLEDINSIMDIVPIAEKIIAAFNNPV 489 Query: 483 MIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKE 540 +I+ K +S+GIS D GK+ + L A AM ++ +G N +QFF +MNE + E Sbjct: 490 LIESKELYTGISMGISLYPDDGKSYNELFKAADTAMYQVKASGKNNFQFFKQSMNEKITE 549 Query: 541 RLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEE 600 RL L +L+ AI NN+L LVYQP+I ET +YG+EAL RW P G + P +FI ++EE Sbjct: 550 RLFLENSLRNAIGNNELFLVYQPKINLETKRVYGMEALIRWRHPEIGLIRPDKFISISEE 609 Query: 601 IGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGID 660 G+I NIG WV +A HI +S+N+S+ + + + + ++ GID Sbjct: 610 TGQIYNIGLWVAKQAIIDTKALHEAG-HILTVSINVSSKQLENEKFIDDICCVVNEIGID 668 Query: 661 GHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKID 720 + +EITES +M + + K + L D G LS+DDFGTG+S LS L LP IKID Sbjct: 669 KSYVELEITESHIMSNIDKALKILNELSDKGFKLSIDDFGTGYSSLSYLKKLPAQTIKID 728 Query: 721 KSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSR 780 +SFV ++ +++ I ++ ++L V+AEG ET+E + L+ +HC +QGYFFS+ Sbjct: 729 RSFVLDIYKDEDDRSIVATIIAMAKALGKDVIAEGSETQEHIDTLKYLHCNKVQGYFFSK 788 Query: 781 PLPAEEIPGWMSS 793 P+ +E ++ + Sbjct: 789 PIEIDEFKEFVDN 801 >UniRef50_B6R9S7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R9S7_9RHOB Length = 728 Score = 275 bits (703), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 148/433 (34%), Positives = 246/433 (56%), Gaps = 11/433 (2%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV----DKAVSPVVYLIGVDHIQDVID 419 +++++ H+ + D +TGLPNR L +D+ + + S ++ I +D + + D Sbjct: 271 DRKRAEAHLLHIAHHDALTGLPNRTMLGERIDEEIFQCRNSGRSFALHFIDLDRFKSIND 330 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSN---ITQIADELRN 476 +LG+ D+ L + R + + R+ G +F + L+ D+ + + A L + Sbjct: 331 ALGHRTGDRLLEVLAERLLRCVDGSDLVARLGGDEFAI--LQTDLKSSEEAMRFAQHLVS 388 Query: 477 VVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAM 534 VV +P I K + S+GI+ + G N + LL A AM + +GGN + FS M Sbjct: 389 VVEEPFHISGKELQTSASVGITKYPEDGLNSEELLRCADMAMYQSKADGGNTFHLFSTKM 448 Query: 535 NEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRF 594 + VKE + L A L+ AI ++QL+L YQPQI T E+ G EAL RW+ P +G V P+ F Sbjct: 449 DHHVKETVALEAELRNAIEHDQLELFYQPQIDLRTNEIVGAEALLRWNRPDYGVVAPNVF 508 Query: 595 IPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAM 654 + AEE+G I IG WVI AC+Q +W + P ++VN+S FR +P + DA+ Sbjct: 509 LGTAEEVGLILPIGEWVIFAACQQAKKWMDMGLETPRIAVNISPTQFRKQNVPQLLKDAL 568 Query: 655 HAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPV 714 + + +L +EITE++++ + ++ +R+MG+ +S+DDFGTG+S L+ L V Sbjct: 569 VSCSLPADKLEIEITENIVLHGSDATVRDLREIREMGIAISIDDFGTGYSSLAYLSRYSV 628 Query: 715 TEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQ 774 +KID+ F +T+ +++AI +G+SL+L+++AEGVET+EQ E L+ C + Q Sbjct: 629 DCLKIDRCFTRDMMTDPNNTVIIKAIVGLGKSLDLSIIAEGVETREQAEYLKDAGCEMAQ 688 Query: 775 GYFFSRPLPAEEI 787 GY F +P+PAE+ Sbjct: 689 GYLFGKPVPAEDF 701 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 275 bits (703), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 219/813 (26%), Positives = 390/813 (47%), Gaps = 62/813 (7%) Query: 14 FFPALEQNMMGAVLINENDE-VMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEY 72 F L+++ +G + D V+F N ++ G E+ IG++ D E Sbjct: 10 FLGILDESPVGVSVSRRRDGLVLFVNRRFCQITGMTPEQCIGHSARRHFADD--DQRLEV 67 Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQK 132 +R +E G E +++ + DGS W+ + + G+ LA + D S + Q Sbjct: 68 VRQLKEAG----EIADADVKFFRVDGSSFWSVLTIRSATLNGEAVNLAWLYDVS-KRKQA 122 Query: 133 EQT----RQLIIA-VDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ-----PD 182 EQ + LI A +D +++++ E I+ N A + +F + G PD Sbjct: 123 EQAILDGKTLIRAMLDSSTDGIVLVNAEGTILAVNAAASAIFEKNSDDLPGKAIWDHLPD 182 Query: 183 TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 +++ A R + ++L + + + G K++ + V D + + Sbjct: 183 SVV------APMRRGIDRVLDRRETVESHHAI----GAKLF-DVHMHLVADSVGQRDRVA 231 Query: 243 MTFSDITEERQIRQLEGNILAAMCSSP------PFHEMGEIICRNIESVLNESHVSLFA- 295 + D+T+ Q RQ + A+ +P H E + R V S + Sbjct: 232 IFSRDVTQSHQRRQQLRKLETALEQAPVSVMITDSHGAIEYVNRAFVLVSGYSEDEVLGR 291 Query: 296 ----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGA----PAGILQIKTSSGAETS 345 L++G + + + +W + R +DG+ A I I+ G T Sbjct: 292 NPRLLKSGETVASLYRDMWHCLASGATWQGELCNRAKDGSLFWEYATISPIRDDDGVVTH 351 Query: 346 AFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNR----NNLHNYLDDLVDKA 401 F+ +I+Q +E +Q + Q D +TGLPNR + +H+ ++ + Sbjct: 352 -FMAVKENITQR-------KETEQQLVHQATH-DTLTGLPNRLLLEDRVHHAIEVAKREG 402 Query: 402 VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE 461 + + +D + V DSLG+ D+ L V +R R L+ + R+ G +FV+V Sbjct: 403 RRIGLMFLDLDRFKIVNDSLGHVAGDELLKVVSDRLRHTLRRSDTVARLGGDEFVVVLTH 462 Query: 462 -NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDY 518 + + ++A+++ + +P+ + + SIGI+ D G N + L+ A AM Sbjct: 463 FQSTTELAEVAEKISAALDEPVELSGHKVHVGASIGIAIYPDDGDNFNALMKDADTAMYR 522 Query: 519 IRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEAL 578 ++ G N + F+ MN+ +RL L AL+ A+ + +L YQPQ+ +TG G+EAL Sbjct: 523 AKQKGRNTFCFYDSNMNDEALDRLKLEEALRRALVRGEFQLFYQPQVDLQTGRTSGVEAL 582 Query: 579 ARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSA 638 RW+ P G V P+ FIP+AEE I IG WV+ E+CRQ+A WR + ++VN+S Sbjct: 583 IRWNSPERGQVSPALFIPVAEESNLISMIGWWVLEESCRQIAAWREAGLTGIKVAVNVSG 642 Query: 639 LHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDD 698 F ++ L +SD M + + QL +E+TES +M +++ LR++G+ +SVDD Sbjct: 643 RQFLNHALVECISDLMAQYAVLPSQLEIELTESTVMAEPDRAIEQLTRLREIGIQVSVDD 702 Query: 699 FGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVET 758 FGTG+S LS L LP++ IK+D+SFV + A++ AI + +L++++VAEGVET Sbjct: 703 FGTGYSSLSYLKRLPLSTIKVDRSFVRDVNNQSDNAAIVSAILGLADALDMSIVAEGVET 762 Query: 759 KEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 + + + L+ C +QG+ +++P+PA+++ WM Sbjct: 763 EGEEQHLKDAGCIKVQGFRYAKPMPADQLAAWM 795 >UniRef50_Q47FF8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FF8_DECAR Length = 996 Score = 275 bits (702), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 216/687 (31%), Positives = 336/687 (48%), Gaps = 43/687 (6%) Query: 133 EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPA 192 ++TR+ +D + P +LD E H + N AF G + + G D L FPA Sbjct: 324 DKTREGRALLDSIPDPAWLLDNEGHYLAVNEAFCHYKGLPMEQVLGHTVDEL-----FPA 378 Query: 193 DNR--IRLQQL-LWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 + +R QL +++ E + L G+ + PVY + L D+T Sbjct: 379 EEAKVLRDGQLEVYRKGGPVREVVWLHLRGKLSPFEFLRVPVYRDDGQPRGLAGVAWDMT 438 Query: 250 E-----ERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHW 304 E ERQ R + A + +++ N ++V S SL L+ G P + Sbjct: 439 ERYEAEERQ-RLITHFFDHANDAVLILDAERQVVTLN-KAVTTISGYSLDDLK-GRPPRF 495 Query: 305 ASSSHGAEIQ--------NAQS-WSATIR--QRDGA----PAGILQIKTSSGAETSAFIE 349 + ++ N Q W ++ ++DG+ I I+ +G + + Sbjct: 496 MLEGYQDKVSLDELSLALNEQGVWRGEMKAVRKDGSLLPIYCNISSIRNDAGKVVNWAV- 554 Query: 350 RVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLI 409 V D+S+ AA A IE L D +T LPNR + + + A + LI Sbjct: 555 FVTDLSERKAAEA--------RIESLTHVDQLTELPNRQGFSRIMGEWLAAARKGALILI 606 Query: 410 GVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQ 469 +D + V D+ G+A D L + R R+ L+ +L R+ G QF ++ + + + Sbjct: 607 DLDQLSRVNDAFGHAAGDAMLRRISVRLRKILRDGDFLGRLGGDQFGVLLAQGIRPVVAE 666 Query: 470 I-ADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNG 526 + A +L + +++P+MI+ T S GI G + LL A NA+ + + +G N Sbjct: 667 VVARKLLDAIAQPVMIEGSDIVTTASAGICLLGSDGHDVASLLRNADNALHHAKDSGQNA 726 Query: 527 WQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLH 586 ++FFS MN + ERL L + L+ A+S N+L L YQPQ+ +GE+ G E+L RW P Sbjct: 727 FRFFSADMNVRMAERLRLESDLRWALSRNELLLHYQPQVDINSGEIIGFESLLRWQHPEL 786 Query: 587 GHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQL 646 G V P FIPLAEE I IG WV+ EACRQ W+ + ++VNLSA+ F + Sbjct: 787 GMVSPVNFIPLAEESRLILPIGTWVLEEACRQNKAWQDAGMAPKVVAVNLSAVQFHGADI 846 Query: 647 PNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGL 706 VS ++ G++ L +EITES+++E + + + L+ +GVGLS+DDFGTG+S L Sbjct: 847 VALVSQSLQNSGLEARYLELEITESVIIEDPERVIRIMDELKMLGVGLSIDDFGTGYSSL 906 Query: 707 SRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLR 766 S L P+ +IKID+SFV A++ + I + L V+AEGVET EQ E LR Sbjct: 907 SYLKRFPIDKIKIDRSFVRDLEHNTNDAAIIRMVIGIAEELERKVIAEGVETVEQLEFLR 966 Query: 767 KIHCRVIQGYFFSRPLPAEEIPGWMSS 793 HC QG++ S +PA EIP ++S Sbjct: 967 SHHCDEYQGFYCSPGVPAGEIPDLVAS 993 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 20/236 (8%) Query: 25 AVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD----LRPAHPEYIRHNREGG 80 A L++ + N A G E+V+G+ +D L P + LR E R +GG Sbjct: 340 AWLLDNEGHYLAVNEAFCHYKGLPMEQVLGHTVDELFPAEEAKVLRDGQLEVYR---KGG 396 Query: 81 KARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLII 140 R L L K + R + + +G+ LA V E + E+ ++LI Sbjct: 397 PVR---EVVWLHLRGKLSPFEFLRVPVYR--DDGQPRGLAGVAWDMTERYEAEERQRLIT 451 Query: 141 AV-DHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQ 199 DH + V++LD ER +V N+A T + GY + + G P +L +++ L Sbjct: 452 HFFDHANDAVLILDAERQVVTLNKAVTTISGYSLDDLKGRPPRFMLE----GYQDKVSLD 507 Query: 200 QL---LWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER 252 +L L + + E + + G + I +IS + + + N + +D++E + Sbjct: 508 ELSLALNEQGVWRGEMKAVRKDGSLLPIYCNISSIRNDAGKVVNWAVFVTDLSERK 563 >UniRef50_B6IWY2 Diguanylate cyclase, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IWY2_RHOCS Length = 979 Score = 275 bits (702), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 155/430 (36%), Positives = 237/430 (55%), Gaps = 11/430 (2%) Query: 369 RQHIEQLIQF----DPMTGLPNRNNLHNYLDDLVDKAV----SPVVYLIGVDHIQDVIDS 420 R+ E+ + + DP+TGLPNR L + L D+A S V L+ +D + V DS Sbjct: 536 RKRFEEQLMYVSTHDPLTGLPNRTLLQDRLQHAADQAERKGNSVAVLLLDLDRFKLVNDS 595 Query: 421 LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVS 479 LG+ D+ L + R ++P + R+ +F++++ + + ++A+ + +S Sbjct: 596 LGHQVGDKLLRAISQRLASSVRPADTIGRLGADEFLIIAEDLTEPQMAARVAETVLAGLS 655 Query: 480 KPIMIDDKPFPLTLSIGISYDLGKNRDY--LLSTAHNAMDYIRKNGGNGWQFFSPAMNEM 537 +P +D + +T SIGI+ G D LL A AM + GGNG++FF+P MNE Sbjct: 656 QPFGLDGQQLFITCSIGITLFPGDATDIGALLRDADTAMHTAKSAGGNGYRFFTPEMNEA 715 Query: 538 VKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPL 597 RL L AL+EAI Q +L YQP+ ET + G+EAL RW P G +PPS FIP+ Sbjct: 716 AVARLSLEHALREAIDQGQFELHYQPKASLETMQTVGVEALLRWRHPEMGMIPPSTFIPV 775 Query: 598 AEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAW 657 AEE G I IG WV+ A Q+ W + ++VN+S S+ +++ + + Sbjct: 776 AEETGMILAIGDWVLRAALEQINRWERAGLEPLPVAVNVSVRQITSSHFADRIQSLLDEY 835 Query: 658 GIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEI 717 G+ L +EITE+ MM + I + LR G+ ++VDDFGTG+S LS L LP+T + Sbjct: 836 GVRPDLLELEITETAMMSNMAFIADGLAELRGRGIRIAVDDFGTGYSSLSYLRRLPITTL 895 Query: 718 KIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYF 777 K+D+SFV + A+ I ++G+ L LTVVAEG+ET+EQ + LR+ C QG+ Sbjct: 896 KVDRSFVSEAPSNADTGAIAATIIAMGRQLGLTVVAEGIETQEQLDFLRRHRCHEAQGFL 955 Query: 778 FSRPLPAEEI 787 P+PA E+ Sbjct: 956 IGFPVPAAEL 965 Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust. Identities = 60/259 (23%), Positives = 98/259 (37%), Gaps = 23/259 (8%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR-DL 65 DN ADGI + ++E+ + N AA +L+G+ +V+G LI D Sbjct: 297 DNVADGI------------ITLDEDLRIETMNRAALELFGHAAADVVGKPFVTLIDEGDW 344 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDA 125 + R+ G R E+Q F +S++ + + +V+D Sbjct: 345 TRVAMALMACLRQSGDGRRRETWSEIQGRTGRNVTFSMAFGVSQMRLGDRRTAICVVQDI 404 Query: 126 S----VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 + E A ++ +L +AV V +D I + F EM GY S Q Sbjct: 405 TRRKQAEQALRDSEERLKLAVRATRSGVFDVDYANGIFWWSPEFIEMLGYEGSPPG--QA 462 Query: 182 DTLLNIPEFPADNRIRLQQ----LLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 D L P D L Q L K+ + L R G IWI+A + D Sbjct: 463 DLLFREILHPDDRPAALAQIERYLAGKSGDYHAFYRLRHRDGSLIWIEARGQAIRDDRGR 522 Query: 238 LQNLVMTFSDITEERQIRQ 256 + T +D+T+ ++ + Sbjct: 523 PVRITGTMTDVTDRKRFEE 541 >UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNY7_9PROT Length = 1003 Score = 274 bits (701), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 157/442 (35%), Positives = 246/442 (55%), Gaps = 19/442 (4%) Query: 365 QEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDS 420 Q+ S + I +L FD +TGLPNR + LD + +A + + +D + + D+ Sbjct: 516 QKHSEEKIRRLAYFDTLTGLPNRQSFLERLDRELLRARRTNHRMALLFLDLDGFKRINDT 575 Query: 421 LGYAWADQALLEVVNRFREKLKPDQYLCR------------IEGTQFVLVSLEND-VSNI 467 LG++ D L V +R +EKL+ ++ R + G +F +V + D V Sbjct: 576 LGHSAGDCLLQTVADRLQEKLRAGAFIARPALDESSLHFARLGGDEFTVVLPDVDTVETA 635 Query: 468 TQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGN 525 IA ++ ++ +P +I ++ +T SIGI+ D G + LL A AM Y ++ G N Sbjct: 636 CLIAQRIQELLGRPTLIGEQEIAVTSSIGIALFPDDGADAATLLKHADTAMYYAKEQGRN 695 Query: 526 GWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPL 585 WQ + + RL L +++ + + +L YQPQ+ A+ G + G+EAL RW P Sbjct: 696 NWQLYDRTLTTRTTARLALEGDIRKGLERGEFRLFYQPQVSADDGTIVGVEALIRWQHPQ 755 Query: 586 HGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQ 645 G V P+RFIP+AEE G I IG WV+ ACRQ+ +W+ + +P ++VN+SA + Sbjct: 756 QGLVSPARFIPVAEESGLIVPIGEWVLTAACRQVRQWQQSGVPVPRVAVNVSARQLGAAG 815 Query: 646 LPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSG 705 + V+ + A GI +L +E+TES++M+ + + K + LR MGV S+DDFGTG+S Sbjct: 816 FLDTVAAIIVATGIAADRLELELTESILMDPEAKRIKGLSRLRAMGVHFSIDDFGTGYSS 875 Query: 706 LSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEML 765 LS + P+ +KID+SFV + + AI S+ +SLNL VVAEGVET+EQ L Sbjct: 876 LSYIKRFPIGTLKIDQSFVHGLPQDADDAGITTAIISMARSLNLEVVAEGVETREQLAFL 935 Query: 766 RKIHCRVIQGYFFSRPLPAEEI 787 ++ C +QGY FS PLP +E+ Sbjct: 936 QRALCPKLQGYLFSYPLPPDEM 957 >UniRef50_Q30P04 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30P04_SULDN Length = 770 Score = 274 bits (701), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 147/446 (32%), Positives = 251/446 (56%), Gaps = 6/446 (1%) Query: 347 FIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP-- 404 F +I Q L + + + +E L + D +T LPN+ L + L+ ++ A Sbjct: 316 FTNERREIQQRNINLQKKVQTAANELEHLSRHDHLTNLPNKTLLIDRLEHSINVASKNGQ 375 Query: 405 --VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN 462 + + +D +++ D+ + D+ L ++ R ++ +K + + R G +F+++ + Sbjct: 376 KVSILFLDLDRFKEINDTYNHEVGDKLLQDISRRLKKLIKEEDTIGRFGGDEFIIILNNS 435 Query: 463 DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIR 520 + + ++ + + +S+P ++ T SIGIS D G +RD L+ A AM + Sbjct: 436 NETQTVEVVTNIMSAMSEPFNVNKVKLHTTFSIGISIFPDDGNSRDILIRNADTAMYEAK 495 Query: 521 KNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALAR 580 NG N +QF+ M E+ ER L + L++AI N + ++ +QP+I A ++ G+EAL R Sbjct: 496 SNGKNRYQFYDKKMTELAFERTTLESNLRKAIQNEEFEVYFQPKIDARVDKVIGLEALIR 555 Query: 581 WHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALH 640 W+ P G +PP +FIP AE IG I I RW++ EA Q+ W+ +NI LS+N+SA Sbjct: 556 WNHPELGLIPPVKFIPFAENIGLIIEIDRWMMREAAAQVLLWKKENIVCGKLSINVSAKQ 615 Query: 641 FRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFG 700 + +S ++ GID L +EITE ++M+H + + +R++G+ +SVDDFG Sbjct: 616 LEDDNYVEFLSQKINDIGIDPKDLEIEITEGLIMKHSLHVTSTLNAIRELGISISVDDFG 675 Query: 701 TGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKE 760 TG+S LS L LP+ ++KID+SFV +K +A+++ I ++ +L+L ++AEGVETKE Sbjct: 676 TGYSSLSYLKRLPIDKLKIDRSFVKDLPHDKDDIAIVKTIIALANNLSLELIAEGVETKE 735 Query: 761 QFEMLRKIHCRVIQGYFFSRPLPAEE 786 Q + L C IQGYF+S+PL E Sbjct: 736 QRDFLLSEGCHNIQGYFYSKPLKVNE 761 >UniRef50_Q31NI4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31NI4_SYNE7 Length = 929 Score = 274 bits (701), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 151/438 (34%), Positives = 252/438 (57%), Gaps = 13/438 (2%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV----SPVVYLIGVDHIQDVID 419 EQ++ + + D +TGLPNR L + L A+ S + I +D + + D Sbjct: 486 EQKRYEEELSFSASHDVLTGLPNRAVLEDRLRQGCKMALRQKHSLAILFIDLDGFKLIND 545 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV----SLENDVSNITQIADELR 475 S+G+ D L+EV R E+++ + RI G +F+++ LENDV IAD L Sbjct: 546 SIGHRSGDLLLVEVAQRMCEQVRAGDTVARIGGDEFIILLVDLKLENDV---ISIADRLL 602 Query: 476 NVVSKPIMIDDKPFPLTLSIGISYDLG--KNRDYLLSTAHNAMDYIRKNGGNGWQFFSPA 533 V++P I +T S+GI+ G + L+ A AM ++ G N +Q+++ Sbjct: 603 ASVARPYHIQGIYLHVTASMGITLSDGDIEQPTQLIQQADLAMYKAKQEGRNNYQWYTND 662 Query: 534 MNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSR 593 +N ++ER+ L L++AI +L +QP+I +G++ G+EAL RW P G + P+ Sbjct: 663 LNLRLRERVHLRNELQKAIETEAFELYFQPKIEGCSGQVIGLEALLRWQHPQMGFISPAT 722 Query: 594 FIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDA 653 F+P+AE+ G+I + +WV+ ACRQL + Q I P+++VN+S + FR V A Sbjct: 723 FVPIAEDTGQIIPLSQWVLETACRQLRDLLQQGIAAPSVAVNISTVQFRRINFVKSVQSA 782 Query: 654 MHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLP 713 + + + L +EITE+++ ++ + +++Q L+++GV +S+DDFGTGFS LS L LP Sbjct: 783 LQKYQLKSEHLEIEITENVLFDNTEKAIEKLQRLKELGVNISIDDFGTGFSSLSYLKELP 842 Query: 714 VTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVI 773 + +KID+SFV T+ R A+ + I S+ L L VVAEGVET++QF+ L++ +C Sbjct: 843 IDTVKIDRSFVQEINTDSRDAAITQGIISMAHHLRLNVVAEGVETEQQFKFLQQSNCDQY 902 Query: 774 QGYFFSRPLPAEEIPGWM 791 QGY+F++P+P E + ++ Sbjct: 903 QGYYFAKPMPFEALKQYL 920 >UniRef50_Q0AAW8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAW8_ALHEH Length = 1051 Score = 274 bits (701), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 165/455 (36%), Positives = 254/455 (55%), Gaps = 11/455 (2%) Query: 354 ISQHMA-ALALEQEKSRQ-HIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYL--- 408 I+ ++A L L + K R+ HI L Q DP+TGLPNR L + L + +A L Sbjct: 593 ITHYIAVGLDLTETKDREAHIRYLAQHDPVTGLPNRGLLADRLGQALRRAQDQHYRLALL 652 Query: 409 -IGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSN 466 + +D + + ++LG+ D+ L V R ++ + + RI QF+++ E + + Sbjct: 653 SLDLDRFKIINETLGHVAGDEVLQTVAQRLQDHVNGAGTVSRIGSDQFLILLPEIHKPTE 712 Query: 467 ITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGG 524 Q A+ L V++P+ + + + +GI+ + G N + L S A AM ++ G Sbjct: 713 AAQAAERLMACVAEPLDLSGQELTPSSVVGIALYPEDGDNLETLHSHADAAMSMAKQASG 772 Query: 525 N-GWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHD 583 + G++FFS M +ERL L + L+ A+ + +L YQPQ+ G L G+EAL RWH Sbjct: 773 HEGYRFFSSDMTSRARERLSLESRLRRALDRGEFRLHYQPQVSLADGTLTGMEALLRWHA 832 Query: 584 PLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRS 643 G + P+RFIP+AEE G I +GRWV+ EACRQ WR + +SVNLS + R Sbjct: 833 GDEGDISPARFIPIAEETGLIVPLGRWVLGEACRQNRAWRQAGLPALPVSVNLSVVQLRR 892 Query: 644 NQLPNQVSDAMHAWGIDGHQLTVEITESMMM-EHDTEIFKRIQILRDMGVGLSVDDFGTG 702 + + V A+ G+ G L +E+TES+ + E D + Q LR+MG+ L++DDFGTG Sbjct: 893 SDVVADVRRALETSGLPGDGLHLEVTESLFLSEDDPAVVTGFQTLREMGISLAIDDFGTG 952 Query: 703 FSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQF 762 +S L L LP+ ++KID+SFV A+ +AI SI +SL L V+AEGVET + Sbjct: 953 YSNLGYLKRLPIAKLKIDQSFVRGIGDSGHDTAINQAIISIARSLGLGVIAEGVETAAEL 1012 Query: 763 EMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPL 797 +L+ + C IQG+++SRPL AE M++ PL Sbjct: 1013 RVLQALGCDEIQGFYYSRPLDAERAGQLMAAPPPL 1047 >UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5X9_9PROT Length = 927 Score = 274 bits (701), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 234/837 (27%), Positives = 387/837 (46%), Gaps = 120/837 (14%) Query: 18 LEQNMMGAVLINENDE-VMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHN 76 +E + G VLI +D + + N E L+GY E+IG +I ++ N Sbjct: 136 VENAVEGIVLIKASDSTIQYTNRQFETLFGYAPGELIGKHISII---------------N 180 Query: 77 REGGKARVEG---MSRELQLE----------KKDGSKIWTRFALSKVS-AEGKVYYLALV 122 G K+++E ++R+L+ E +KDG+ I T S E ++ Sbjct: 181 APGNKSQMETAQEINRQLEKEGVWSGEVFNRRKDGTTINTFLNASSFQHPELGDLWIGYQ 240 Query: 123 RDAS----VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 RD + E E+ Q A+D ++D + +++ N A+ + GY E G Sbjct: 241 RDITKRKLTEAVMLEKESQYRAAIDTAADGFWLVDMQGRLLEVNDAYARLSGYSREELIG 300 Query: 179 MQPDTLLNIPEFPA-DN----RIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYD 233 M +IPE A DN R R+++++ + + + + G +W IS Y Sbjct: 301 M------SIPELDAIDNSELVRARIEEIIRNGGYLEFDTMHKRKDG-SLW-PVHISTTYS 352 Query: 234 VLAHLQNLVMTFSDITEERQIRQLEGNILAAM-------------------CSSPPFHEM 274 ++ + V + +D+TE++ R E LAAM +P F +M Sbjct: 353 SVSGGRCFVFS-TDLTEQK--RAEESLRLAAMVYENSSEAILVTDADNLIIAVNPAFEQM 409 Query: 275 -----GEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGA---EIQNAQSWSA----- 321 E++ +N + H F + + HG + +N + + Sbjct: 410 TGYAAAEVLGKNPRIFKSGRHDRAFYHSMWLALDTEGYWHGEVWDKRKNGEEYIKLLTIN 469 Query: 322 TIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLI----Q 377 IR DGA I +H+A E R+ +E+LI Sbjct: 470 VIRDDDGA------------------------IYRHVALFTDITE--RKKVEELIWRQAN 503 Query: 378 FDPMTGLPNRNNLHNYLDDLVDKA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEV 433 +D +T LPNR H+ L+ KA +S + LI +D ++V D+LG+ D L+E Sbjct: 504 YDSLTKLPNRQMFHDRLEQEAKKAHRAGLSMALLLIDLDRFKEVNDTLGHDKGDILLIEA 563 Query: 434 VNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLT 492 R ++ + R+ G +F+++ E D+++I ++A ++ +++P +D +P ++ Sbjct: 564 ARRISACVRESDTVARLGGDEFIVILSELEDMASIDRVAQDILGSLAEPFKLDAEPAYIS 623 Query: 493 LSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKE 550 SIGIS + D L A AM + G N + +F+ M E + R+ L L+ Sbjct: 624 ASIGISLYPNDATELDVLFKHADQAMYVAKYAGRNRFNYFTKDMQEAAQARMHLANDLRI 683 Query: 551 AISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRW 610 A++ Q ++ YQP + +G++Y EAL RW P+ G V P+ FIPLAEE G I IG W Sbjct: 684 AVAAGQFRVYYQPIVEMSSGQIYKAEALIRWQHPVRGMVSPAEFIPLAEETGLIVPIGEW 743 Query: 611 VIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITE 670 V +A +Q+ +WR + +SVN S + FR + + + + + G + VEITE Sbjct: 744 VFRQAVQQVVQWRRKFHRSFQISVNKSPVQFRHAESLSW-PEYLEQQHVSGDSIIVEITE 802 Query: 671 SMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTE 730 ++++ + E+ K++ RD G+ +++DDFGTG+S LS L + +KID+SFV Sbjct: 803 GLLLDAEVEVNKKLLRFRDAGIQVAIDDFGTGYSSLSYLKEFDIDYLKIDQSFVRNLGPG 862 Query: 731 KRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 LAL EAI + L V+AEGVET Q E+L C QGY +SRPLP EE Sbjct: 863 TSDLALCEAIIVMAHKLGFKVIAEGVETSTQHELLAAAGCDYGQGYLYSRPLPPEEF 919 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 42/263 (15%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNI---DMLIPR 63 D AADG + L++ ++ N A +L GY REE+IG +I D + Sbjct: 265 DTAADGFW------------LVDMQGRLLEVNDAYARLSGYSREELIGMSIPELDAIDNS 312 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVR 123 +L A E I N GG + M + +KDGS +W + S+ Sbjct: 313 ELVRARIEEIIRN--GGYLEFDTMHK-----RKDGS-LWPVHISTTYSSVSGGRCFVFST 364 Query: 124 DASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDT 183 D + + +E R + ++ ++V D + I+ N AF +M GY +E G P Sbjct: 365 DLTEQKRAEESLRLAAMVYENSSEAILVTDADNLIIAVNPAFEQMTGYAAAEVLGKNPRI 424 Query: 184 LLNIPEFPA---------DNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 + A D +W ++ +E++ L +I+ + D Sbjct: 425 FKSGRHDRAFYHSMWLALDTEGYWHGEVWDKRKNGEEYIKLL----------TINVIRDD 474 Query: 235 LAHLQNLVMTFSDITEERQIRQL 257 + V F+DITE +++ +L Sbjct: 475 DGAIYRHVALFTDITERKKVEEL 497 >UniRef50_A9BUE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Comamonadaceae RepID=A9BUE4_DELAS Length = 692 Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 154/432 (35%), Positives = 236/432 (54%), Gaps = 9/432 (2%) Query: 368 SRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD----KAVSPVVYLIGVDHIQDVIDSLGY 423 +++ ++ L Q D +T LPNR L L + K + V +I +DH + + DSLG+ Sbjct: 250 AQERMDFLAQHDQLTQLPNRVRLIQMLRQALSLASVKRRALAVLIIDLDHFKTINDSLGH 309 Query: 424 AWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN-DVSNITQIADELRNVVSKPI 482 D L EV R R ++ + R+ G +FV+V ++ D A L+ ++ P Sbjct: 310 QAGDLLLCEVAQRLRGSVRAHDLVARVGGDEFVVVLTDDPDPQETETQASHLQRIIEAPC 369 Query: 483 MIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKE 540 ID P ++ +GI+ GKN + LL+ A +AM + +G QF++PA + + Sbjct: 370 AIDGTPLVISPCMGIAMYPGDGKNAEELLNRAESAMHMAKDSGRRNLQFYAPAQDGQATQ 429 Query: 541 RLVL--GAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLA 598 +L L+ A+ + +L YQPQ F G L G EAL RW P G V P FI A Sbjct: 430 AQMLMQEQQLRGALERGEFELYYQPQTFTADGRLAGFEALVRWRHPQRGLVLPGEFIGFA 489 Query: 599 EEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWG 658 E G I I WV+ EACRQ +W+ + + LSVNLSAL FR + +V+ + G Sbjct: 490 EARGLISAIDHWVLREACRQARQWQDEGLAPVPLSVNLSALEFRQRDMAREVAQVLEETG 549 Query: 659 IDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIK 718 ++ L +E+TES +M ++ +Q L+ +GVGL++DDFGTG+S L+ L P+ ++K Sbjct: 550 LEARWLHIELTESTLMHTSGQVQDTLQALQALGVGLAIDDFGTGYSSLAYLRRHPINQLK 609 Query: 719 IDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFF 778 ID+SF+ + A++ AI +G SL+L +VAEGVET Q +LR++ C ++QGY Sbjct: 610 IDRSFIADVPDSEDDTAIVTAIVQMGHSLHLDIVAEGVETPAQLALLRELGCGMMQGYLV 669 Query: 779 SRPLPAEEIPGW 790 + PLPAE W Sbjct: 670 APPLPAERARAW 681 Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust. Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 17/123 (13%) Query: 25 AVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARV 84 A++++ + ++ N A +L GY +E+ G I I + R +Y+R RE R Sbjct: 152 AIVMHRDGLIIDGNEALSRLAGYTLDELTGRPILDYICPEFRLYALQYMRSGRED---RF 208 Query: 85 EGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVE---------MAQKEQT 135 +G ++ KDG +I + AEG+ Y + LVRD ++ +AQ +Q Sbjct: 209 DGA-----IQHKDGHRIPVEIEAKTMPAEGEPYRIVLVRDITLRQLAQERMDFLAQHDQL 263 Query: 136 RQL 138 QL Sbjct: 264 TQL 266 >UniRef50_Q2RRN9 Sensor protein n=3 Tax=Proteobacteria RepID=Q2RRN9_RHORT Length = 1301 Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 213/690 (30%), Positives = 333/690 (48%), Gaps = 82/690 (11%) Query: 152 LDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP----EFPADNRIRLQQLLWKTAR 207 LDP+ H ++ N ++ GY PD LL + P D R L+Q+ A Sbjct: 643 LDPDGHWLRVNHKLCDIVGY--------PPDELLTLSFQDITHPDDLRADLRQMEALLAG 694 Query: 208 DQDEFLL----LTRTGEKIWIKASISPVYDVL------------------AHLQNLVMT- 244 D + + + +TGE +WI ++S V D+ A LQ L+ + Sbjct: 695 QIDTYTIEKRYIRKTGESLWINLTVSLVRDIHNAPAYFISVVENIQSRKEAELQLLLASA 754 Query: 245 -FSDITEERQIRQLEGNILAA--MCSSPPFHEMGEIICRNIESVLN-----ESHVSLFAL 296 FS+ E + L+G+ILA S +E E++ RN + + E +V+L+ Sbjct: 755 VFSNSMEGIFVTDLKGSILAVNPAFSQITLYEAAEVLGRNARILQSGRQNREFYVALWQ- 813 Query: 297 RNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAP----AGILQIKTSSGAETSAFIER 350 ++ SW I R+RDG I ++ G E + +I Sbjct: 814 ---------------DVLTIGSWRGEIWNRRRDGEVFPEWLSISSVRNHQG-EVTNYIGI 857 Query: 351 VADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VV 406 +D+S+ ++ +++ H L DP+TGLPNR L + LD +++A V Sbjct: 858 FSDLSR------IKHSEAKFH--HLAHHDPLTGLPNRLLLRSRLDHAIERARRTGGRCAV 909 Query: 407 YLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEND-VS 465 + +D + + DSLG+ D L + R L L R+ G +FV V + D + Sbjct: 910 LFLDLDRFKMINDSLGHRAGDTLLRTLGARLTACLGDTGTLARLGGDEFVAVIEDIDGIP 969 Query: 466 NITQIADELRNVVSKPIMIDDKP-FPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKN 522 + IA + + +P + + P + S+GIS + G N D LL A A+ ++ Sbjct: 970 AVGTIALTMLERLREPCRLSEGPEVCIGGSVGISLFPEDGDNPDTLLQHADTALGQVKGA 1029 Query: 523 GGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWH 582 GG + F++ + E + RL L A L+ A+ L YQP I TGE+ G+EAL RW Sbjct: 1030 GGGAYGFYTRTLTERISARLGLEAGLRHALEQGDFLLHYQPLIALGTGEVEGVEALVRWA 1089 Query: 583 DPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFR 642 +PP RFIPLAE+ G I +G WV+ EACR + WRSQ + + L+VNLS FR Sbjct: 1090 GGDGLLIPPDRFIPLAEDTGLIVPLGEWVLGEACRTMQRWRSQGMPLTVLAVNLSPRQFR 1149 Query: 643 SNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTG 702 + +P V + G+ L +EITES +ME ++ L+ +GV L++DDFGTG Sbjct: 1150 DHAIPALVRRVLEQTGLPASVLELEITESAIMEQGAAAEAQMTGLKHLGVRLAIDDFGTG 1209 Query: 703 FSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQF 762 +S L+ L P+ +IKID+SFV + + I ++G++L L V+AEGVET +Q Sbjct: 1210 YSSLANLRRFPIDKIKIDQSFVRDIPRDAAAEEITATIIAMGRTLKLHVLAEGVETTDQL 1269 Query: 763 EMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 + L + C QGY FSRP+ A + W++ Sbjct: 1270 DFLSRKQCDSAQGYLFSRPITAAALEKWLA 1299 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 155/440 (35%), Positives = 244/440 (55%), Gaps = 15/440 (3%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVID 419 E+ + + L FDP+TGLPNR + L + A + + +D ++V D Sbjct: 427 ERHDYQNRLRHLANFDPVTGLPNRTLFKDRLQHALANATRNQRLVALLFLDMDQFKNVND 486 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN--DVSNITQIADELRNV 477 SLG+ D+ L + R ++ + R G +F+++ LEN + A+ + Sbjct: 487 SLGHMMGDELLRQTAERLLGCVREGDTVARFGGDEFIIL-LENIEHSEQASLSAERVVQA 545 Query: 478 VSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMN 535 + +P + + +SIGIS + ++ + L+ A +AM + GG G++F++P MN Sbjct: 546 MRRPFRLGEHEHFCNVSIGISLYPEDDEHPEDLVRHADSAMYLAKAQGGAGYRFYTPDMN 605 Query: 536 EMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFI 595 ERL+L L +A+ Q ++ YQPQ+ +G + G+EAL RW P G VPP+ FI Sbjct: 606 TRAMERLLLQNQLHQALELGQFQVHYQPQMDLRSGRICGVEALVRWQHPERGLVPPAEFI 665 Query: 596 PLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMH 655 P+AE+ G IE +G WV+ A R++ W+ + + LSVNLS FR LP V + Sbjct: 666 PMAEDTGLIEPLGEWVLRTAAREVRGWQDRGLPALNLSVNLSPRQFRHPDLPGMVERVLA 725 Query: 656 AWGIDGHQLTVEITESMM---MEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSL 712 G++ +L +EITE ++ +EH + RI L GV +S+DDFGTG S L+ L L Sbjct: 726 ESGLEAERLELEITERLIIVDLEHTVDTLSRIARL---GVRVSIDDFGTGHSSLAYLKRL 782 Query: 713 PVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRV 772 PV +KID+ FVD + A+ EA+ ++G++L L V+AEGVET+EQ LR+ C Sbjct: 783 PVHALKIDREFVDGIGQDSDDAAIAEAVIALGRTLRLQVIAEGVETREQASFLREHGCDA 842 Query: 773 IQGYFFSRPLPAEEIPGWMS 792 +QG+F +RP+PA E+ GW+S Sbjct: 843 VQGFFIARPMPAGELTGWLS 862 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 8/255 (3%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 D +G+ LE+ + G VLIN + NPA +++GY+R+E++G N+ +L+P R Sbjct: 15 DTLNEGVLRAVLEEMVDGVVLINRLGIIREVNPAVTRIFGYERKEMLGANVSLLVPSPDR 74 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDAS 126 H +Y+R+ + G+ R+ G+ R + ++KDGS A+S+V A G+ + +VRD S Sbjct: 75 ERHDQYLRNYLQTGEGRIIGVGRTVHGQRKDGSLFPMELAVSEVKAGGEHLFAGIVRDIS 134 Query: 127 VEMAQKEQTRQLI-IAVDHLDRPVIVLDPE---RHIVQCNRAFTEMFGYCISEASGMQPD 182 E Q QT L A+D + + D + I N AF ++ G + G Sbjct: 135 -ERHQFHQTLALFRRAMDSAYNGIAIADVDAEGERISYANAAFAQITGIPAVDLLGRSLT 193 Query: 183 TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTR-TGEKIWIKASISPVYDVLAHLQNL 241 L E + Q+ +T L R G W ++SP+++ + Sbjct: 194 LLACEGEDGQTCTAMVSQM--RTGGSMRRTLRCQRPDGSLFWNDVTLSPIFNERGEISQC 251 Query: 242 VMTFSDITEERQIRQ 256 + +D T ++ Q Sbjct: 252 IAVLADATALKESEQ 266 >UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLU1_AGRRK Length = 766 Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 170/472 (36%), Positives = 252/472 (53%), Gaps = 6/472 (1%) Query: 317 QSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLI 376 Q I DG GIL + +S G+ I+ HMA +A+ + ++ I L Sbjct: 271 QCRCLAISDADGQIEGILALYSSEGSRFQPDFSEFVSIAVHMAGIAISRHRAEARIGFLA 330 Query: 377 QFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLE 432 DP+TG+ NR L L + A S + + +D+ + V DSLG++ DQ L Sbjct: 331 DHDPLTGMANRALLDRKLTFAMQTADSTRSEVALAFLDLDNFKLVNDSLGHSVGDQLLKI 390 Query: 433 VVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLT 492 V +R E L RI G +FV++ + D+ + +R V++PI+++D +T Sbjct: 391 VASRISELTSDQGSLARIGGDEFVIILEQMDLESCLDRLSAIREAVTRPIVLNDIELRVT 450 Query: 493 LSIGI-SY-DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKE 550 SIG+ SY G LL++A AM ++ G +G F+ AM +V+++L L++ Sbjct: 451 CSIGVASYPSHGSTAGELLASADMAMYRAKELGRDGIALFTSAMTAIVRKKLSRTDELRQ 510 Query: 551 AISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRW 610 A+ ++ L YQPQ+ TG + EAL RW+ G V P FI LAEE I IG W Sbjct: 511 ALLRDEFVLHYQPQVDVRTGRIVAAEALIRWNHSSEGLVYPGDFIALAEETSLIVPIGEW 570 Query: 611 VIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITE 670 V+ ACRQ W+ Q +SVN+SA F+ +L V+ A+ G+D L +EITE Sbjct: 571 VLKTACRQAKAWQDQGREPIRISVNVSARQFQEKRLIETVATALSESGLDPIWLELEITE 630 Query: 671 SMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTE 730 S++M+ R+Q L +GV L+VDDFGTG+S LS L P++ +KID+SF+ + Sbjct: 631 SLIMKDLAGSIARMQELETLGVKLAVDDFGTGYSSLSALKRFPLSRLKIDRSFIADIPHD 690 Query: 731 KRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPL 782 +A+ AI S+ Q L L V+AEGVET+EQ L + C IQGY FSRP+ Sbjct: 691 ADDMAITAAIISLAQKLGLEVIAEGVETEEQARFLVESGCNEIQGYLFSRPV 742 >UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N2J6_9GAMM Length = 1407 Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 154/459 (33%), Positives = 250/459 (54%), Gaps = 10/459 (2%) Query: 337 KTSSGAETSAFIERVADISQHM--AALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYL 394 K S +A + + I H+ ++ ++++ I+ L FDP+TGLPNR +H L Sbjct: 932 KHPSWTGVTALKDEMGQIQSHIIISSDITHRKQTEARIQHLAYFDPLTGLPNRAQMHEAL 991 Query: 395 DDLVDKAVSPVVYL-IGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGT 453 D L+ K S + L I +D + + D++G+ DQ L EV +R +E + + RI G Sbjct: 992 DRLMAKEESQLALLFIDLDRFKPINDTMGHPAGDQVLKEVASRLKEAVGAKNLVSRIGGD 1051 Query: 454 QFVLV-----SLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRD 506 +F ++ E + I +++ + + + +P I+D+ L+ S+GI+ + + Sbjct: 1052 EFTVIMATLPETEQAIQTIIDVSERILHQMMQPFFIEDRQLYLSASVGIALYPENALSGT 1111 Query: 507 YLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIF 566 LL A AM + + G N +QF++ MNE ERL L L A+ ++ +L +Q Q Sbjct: 1112 DLLRNADTAMYHAKAMGKNNFQFYAEEMNEKAMERLELENNLHLALQRDEFELTFQAQWD 1171 Query: 567 AETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN 626 + + G+E L RWH P G V P +FIP+ EE G I IG WV+ AC Q+ +W+ Sbjct: 1172 IKHNCICGVETLLRWHRPDIGLVGPDKFIPIIEETGLIVPIGEWVLRRACEQIMDWQEAG 1231 Query: 627 IHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQI 686 IP L+VNLSA F+ Q+ +++ + G+D + +E+TES++M+ + Sbjct: 1232 YVIPKLAVNLSARQFKDAQMLDRICRIVDETGVDPELIELELTESILMDDIDRTLAVLNE 1291 Query: 687 LRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQS 746 R MG GLS+DDFGTG+S LS L PV+++KIDKSF+ + + I ++ + Sbjct: 1292 ARKMGFGLSIDDFGTGYSSLSYLKQFPVSQLKIDKSFIQNLPYNQEDGQITRTIVAMANN 1351 Query: 747 LNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAE 785 L L V+AEGVE + Q + L+ I C +QGY +S P+PA+ Sbjct: 1352 LGLGVIAEGVENESQRQFLKTIGCYQVQGYMYSHPVPAD 1390 >UniRef50_Q9I310 Uncharacterized signaling protein PA1727 n=74 Tax=Proteobacteria RepID=Y1727_PSEAE Length = 685 Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 163/476 (34%), Positives = 256/476 (53%), Gaps = 8/476 (1%) Query: 320 SATIRQRDGAPAGILQIKTSSGAETSAFIERVAD--ISQHMAALALEQEKSRQHIEQLIQ 377 A R D +L I + A I V D + + LA ++ + + QL Sbjct: 205 GAAGRGIDNGWLAVLVIVITLAVIAIALIVSVLDSRLEARTSVLATSLARANRELIQLAL 264 Query: 378 FDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEV 433 D +T LPNR L + L+ + +A+ V + +D + V D+ G+ D L+EV Sbjct: 265 HDNLTKLPNRMLLDDRLEQAIQQAIRDDRRFAVLFMDLDGFKAVNDAYGHHLGDLLLIEV 324 Query: 434 VNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTL 493 R R ++ + R+ G +FVL+ + ++ +A++L +S+P I ++ Sbjct: 325 AERIRANVRAQDTIARLGGDEFVLLIEAREPADAATLAEKLVKRISQPYQISRHEVRISA 384 Query: 494 SIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEA 551 SIGI+ G+ R L+ A AM + + G NG+ FF +MN +E+L L L++A Sbjct: 385 SIGIALYPGDGQTRHELMINADAAMYHAKDQGRNGYCFFESSMNANAQEQLQLLHDLRQA 444 Query: 552 ISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWV 611 + QL L YQP++ A G + G+EAL RW P HG + P +F+PLAE+ G I IG WV Sbjct: 445 LERRQLVLHYQPKVLAPNGPMIGVEALLRWEHPQHGLITPGQFLPLAEKTGLIVQIGEWV 504 Query: 612 IAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITES 671 + EACRQ+ W ++VNLSAL F L + V +A+ ++ L +E+TES Sbjct: 505 LDEACRQMRLWLDGGHADWNIAVNLSALQFAHAGLVDSVRNALLRHSLEPSHLILEVTES 564 Query: 672 MMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEK 731 M ++ L MGVG+S+DDFGTG+S L L LP +E+KID+ F++ + Sbjct: 565 TAMRDADASLVILEQLSAMGVGISIDDFGTGYSSLLYLKRLPASELKIDRGFINELAHDS 624 Query: 732 RILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 A++ AI ++G++LNL +VAEGVET+ Q E L ++ C +QG+ RP+PAE++ Sbjct: 625 DDAAIVSAIVALGRTLNLKIVAEGVETEAQQEFLTRLGCNSLQGFLLGRPMPAEQL 680 >UniRef50_C1I4R6 Diguanylate cyclase/phosphodiesterase domain 2 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I4R6_9CLOT Length = 960 Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 146/433 (33%), Positives = 255/433 (58%), Gaps = 13/433 (3%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP-------VVYLIGVDHIQD 416 E++K+ + IE L +D +TGLPN+ H +LD + D+ + V +LI +D+ ++ Sbjct: 525 ERKKAEEKIETLAFYDQLTGLPNK---HMFLDKIDDELLRGLKNEYIGVAFLIDIDNFKN 581 Query: 417 VIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELR 475 + D+LG+ + D+ L + F + L D+++C+++G +F+++ L+ N + ++A+++ Sbjct: 582 INDTLGHDYGDEFLKCIAKEFIKLLDNDEFICKLDGDEFLILMLDVNGKAEAEEMANKIL 641 Query: 476 NVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPA 533 + P + +K ++SIGIS + +N+ LL + AM ++NG N + F+ + Sbjct: 642 ELFKNPFKVKEKNIFTSVSIGISIIPNDARNKSELLKNSDIAMYKAKENGKNRYLFYRES 701 Query: 534 MNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSR 593 M + + + L L+ AI ++ +L+YQPQI ++ G EAL RW G+V P Sbjct: 702 MAKDIVRKSQLIDGLRNAICKSEFELLYQPQINMNDSKVIGAEALLRWRSNSFGNVSPIE 761 Query: 594 FIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDA 653 FIPLAE+ I +IG+WV+ AC + EW + I ++VN+S + + N V D Sbjct: 762 FIPLAEQSELIISIGKWVLKNACIKNKEWIDKGITPMTIAVNVSVIQLYQSNFLNTVRDI 821 Query: 654 MHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLP 713 + G+ L +EITES++M + E K + ++D+GV +++DDFGTG+S LS L LP Sbjct: 822 LDESGLPAEYLEIEITESIVMNNIEENLKVLNDIKDLGVKIALDDFGTGYSSLSYLRLLP 881 Query: 714 VTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVI 773 + ++K+DKSF+D + ++E I + +N+ VVAEGVE KEQF++L K+ C I Sbjct: 882 IDKLKLDKSFIDNIHISENDRVIVECIIKLAHEMNILVVAEGVEIKEQFDILYKMGCDRI 941 Query: 774 QGYFFSRPLPAEE 786 QGY+FS+P+ ++ Sbjct: 942 QGYYFSKPISPDK 954 >UniRef50_C6AS31 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Rhizobium RepID=C6AS31_RHILS Length = 781 Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 157/449 (34%), Positives = 249/449 (55%), Gaps = 11/449 (2%) Query: 354 ISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV----SPVVYLI 409 ++ H+A +A+E+++ I + D +TGLPNR L L ++D+A V I Sbjct: 332 LATHIAGIAIERKRVDDRIHFMAHHDDLTGLPNRAFLKERLASILDQARRNNRKVTVAYI 391 Query: 410 GVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF--VLVSLENDVSNI 467 +D+ +D+ D G+A D+ L E+ R ++ + R+ G +F VLV + + I Sbjct: 392 DLDNFKDINDGRGHAAGDEVLKEIATRMANSVRASDMVVRLGGDEFLVVLVHQSSHDAGI 451 Query: 468 TQIADELRNVVSKPIMIDDKPFPLTLSIGIS---YDLGKNRDYLLSTAHNAMDYIRKNGG 524 T+ EL+ +++PI D +T SIG++ +D G + LL+ A AM ++ G Sbjct: 452 TRRLRELQKAINRPIRGADGEITITSSIGVAAFPFD-GATSEELLANADRAMYRAKELGR 510 Query: 525 NGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDP 584 N Q V L L +AI+ +QL L YQPQ+ TG + G+EAL RW+ P Sbjct: 511 NTLQHHEGGSTP-VGMPLGEHEELHQAITGDQLFLQYQPQVDVATGRITGLEALVRWNHP 569 Query: 585 LHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSN 644 G VPP FIPLAEE G I +G WV+ EACRQ +W+ + ++VN+SA F Sbjct: 570 AKGRVPPVNFIPLAEETGLIVPLGLWVLNEACRQARQWQDMGLAPLTIAVNVSAKQFADP 629 Query: 645 QLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFS 704 V++A+ + L +E+TES++M++ ++ LR +GV LS+DDFG+G+S Sbjct: 630 DFATHVAEALERHRLQSRWLELEVTESVVMQNAERALAMMETLRGLGVRLSIDDFGSGYS 689 Query: 705 GLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEM 764 L+ L + P +K+D+S V+ +K +A+ A+ S+ Q+L L+V+AEGVET Q + Sbjct: 690 SLAALKTFPFDRLKMDRSLVEALPGDKTAVAIASAVISLAQTLKLSVLAEGVETDAQMDF 749 Query: 765 LRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 LR+ HC QG+ FS+P+ EEIP + + Sbjct: 750 LRQAHCEEAQGFRFSKPVSPEEIPALLRA 778 >UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K210_DESAC Length = 920 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 150/412 (36%), Positives = 245/412 (59%), Gaps = 12/412 (2%) Query: 379 DPMTGLPNRNNLHNYLDDLVDKA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVV 434 DP+TGLPNR + + L + KA V+ L+ +D +++ D+LG+A D+ L + Sbjct: 495 DPLTGLPNRLLISDRLKLAIAKARRHKTQAVLLLLDLDRFKNINDTLGHAVGDRILTTLA 554 Query: 435 NRFREKLKPDQYLCRIEGTQFVLVSLEN--DVSNITQIADELRNVVSKPIMIDDKPFPLT 492 R +E L+ + R G +F LV LE+ ++S++ +A +L ++VS+P++ID + LT Sbjct: 555 QRMQETLRDTDTVARFGGDEF-LVLLEDIRELSDVVSLAQKLSDLVSQPVLIDGEEMCLT 613 Query: 493 LSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKE 550 S+GIS + D L+ A AM ++ G N +QF++P MN RL L L++ Sbjct: 614 TSVGISVAPEDSIEVDQLIRFADTAMYRAKEKGRNNFQFYTPDMNAHAGRRLQLENNLRK 673 Query: 551 AISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRW 610 A+ ++ + YQPQ+ ++G + G EAL RW P HG + P+ FIPLAEE G IE IG W Sbjct: 674 ALQRQEMVVYYQPQVEMDSGRIIGSEALLRWMHPEHGLISPNDFIPLAEETGVIEEIGAW 733 Query: 611 VIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITE 670 + +AC+Q W+ + + ++VNLSA FR+ L + + ++ G+ L +E+TE Sbjct: 734 ALEQACQQTVAWQKNHPEL-KIAVNLSARQFRNENLVDDIEQILNKTGLAARHLEMELTE 792 Query: 671 SMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTE 730 S++ME + L +G+ L++DDFGTG+S LS L P+ ++KID+SFV+ + Sbjct: 793 SLLMEDVDVAIDLMNRLTKLGITLAIDDFGTGYSSLSHLNRFPIDKLKIDRSFVNSMSLD 852 Query: 731 KRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPL 782 +A I ++G++L L+++AEGVE EQ ++L ++ C QGY+FSRP+ Sbjct: 853 NNGIA--RTIITLGRTLGLSIIAEGVENNEQRQLLLQLGCPQAQGYYFSRPV 902 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 155/445 (34%), Positives = 241/445 (54%), Gaps = 15/445 (3%) Query: 365 QEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV--------SPVVYLIGVDHIQD 416 ++K + +E D +TGL NR LDD + +A+ + V+L+ +D + Sbjct: 323 RKKYEKELEHQSNHDALTGLANRV----LLDDRIQQAIVHAERAQRNTAVFLLDLDRFKV 378 Query: 417 VIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELR 475 + DSLG++ D LL V R + P L R+ G +F +V N ++ +A ++ Sbjct: 379 INDSLGHSQGDAVLLAVAERLSACISPGDTLSRLGGDEFAIVMTHVNHPADARIMAQKIL 438 Query: 476 NVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPA 533 N +P + ++ +T SIG S G+ + LL A AM +K GGNG+QF S Sbjct: 439 NAFEQPFPLGNRELRITTSIGASLYPRDGEQSEDLLRHADAAMYQAKKQGGNGFQFCSEE 498 Query: 534 MNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSR 593 M+ + L L L++A+ L YQP++ +G++ G EAL RW+ P G + P Sbjct: 499 MDTRAHKALELEGDLRQALQLGSFVLHYQPKVKIASGKIDGCEALVRWNHPDKGMISPDD 558 Query: 594 FIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDA 653 FIPLAEE G I +G WV+ EACRQ W++Q + ++VNLSA F + + Sbjct: 559 FIPLAEETGLIIALGEWVLREACRQFKAWQAQGLPPIKIAVNLSARQFLQSDFVESIQTI 618 Query: 654 MHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLP 713 +H + ID H L +E+TESM+ME I K + L+ +G LS+DDFGTG+S L+ L P Sbjct: 619 LHEFDIDPHWLDLELTESMVMEDPDRIAKLLAELKQIGFALSLDDFGTGYSSLNYLRRFP 678 Query: 714 VTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVI 773 + +KID+SF+ ++ ++ ++ I SL + +AEGVET+EQ+ L C I Sbjct: 679 IDCLKIDRSFILDVASDATAASVANSVIGIAHSLGIHAIAEGVETREQYAFLAMCECDSI 738 Query: 774 QGYFFSRPLPAEEIPGWMSSVLPLK 798 QGY FS+PLPA ++ +++ P K Sbjct: 739 QGYLFSKPLPANDLAALLANPTPFK 763 >UniRef50_Q0BFB8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=5 Tax=Burkholderia RepID=Q0BFB8_BURCM Length = 860 Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 154/439 (35%), Positives = 253/439 (57%), Gaps = 11/439 (2%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVID 419 E++ + IE L D +TGLPNRN L + ++ + +A V ++ +D + + D Sbjct: 254 ERKMQQGRIEYLANHDALTGLPNRNLLSDRMEQAMSQARRTGQLVAVMVLDLDRFKHIND 313 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFV--LVSLENDVSNITQIADELRNV 477 S G++ D L V R + ++ + R+ G +FV LV+L ++ IA ++ + Sbjct: 314 SFGHSVGDGLLRVVAARLKRSVRDGDTVARLGGDEFVVMLVNLATQ-ADADVIARKILDT 372 Query: 478 VSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMN 535 +P +D+ +T S+G+S G N + LL TA A+ +++G N ++F++ + Sbjct: 373 FIEPFTLDEHDLHVTTSVGVSLCPTDGTNAETLLKTADAALYAAKEHGRNCYRFYTRELG 432 Query: 536 EMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFI 595 V+E+ +L AL +A++N++L+L YQP++ +TG++ G+EAL RW P G +PP RFI Sbjct: 433 ARVEEQTILENALHQAVANHELELYYQPKVDLKTGQISGVEALIRWRRPGIGVIPPDRFI 492 Query: 596 PLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIP-ALSVNLSALHFRSNQLPNQVSDAM 654 P+AE+ G I IG WV+ AC Q WR + H P ++VNLSA FR + V + Sbjct: 493 PIAEDCGLILPIGEWVLRTACMQAVAWRREG-HPPIRIAVNLSARQFRQQDVAAMVRTTL 551 Query: 655 HAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPV 714 G+ L +E+TES++M+ I ++ L+ +GV LS+DDFGTG+S LS L LP+ Sbjct: 552 EETGLAPDSLELELTESVLMQDCNAIAHTLRELKALGVVLSLDDFGTGYSSLSYLKDLPI 611 Query: 715 TEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQ 774 +KID+SF+D T +L +I ++ +SL++ VAEGVET+ Q L + C +Q Sbjct: 612 DVVKIDRSFLDDVTTSAEGASLTRSIIAMAESLHMETVAEGVETEAQLSFLNRHRCHAMQ 671 Query: 775 GYFFSRPLPAEEIPGWMSS 793 GY+FS P+ +EI +S+ Sbjct: 672 GYYFSHPVTGDEIADMLSA 690 >UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum sp. Group II RepID=B6AQA1_9BACT Length = 702 Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 155/444 (34%), Positives = 246/444 (55%), Gaps = 13/444 (2%) Query: 354 ISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDL------VDKAVSPVVY 407 ++ A L + + + + L D +T LPNR L + +D VD A S V+ Sbjct: 242 LATRTAGLVGSLKAANEKLHYLALHDGLTRLPNRTLLEDRVDQAIRHARGVDGAFS--VF 299 Query: 408 LIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSN 466 + VD + + DSLG++ D+ L ++ R + P+ + RI G +FV+V E D Sbjct: 300 FLDVDRFKPINDSLGHSTGDKVLQQMARRLSGTVGPEDTVARIGGDEFVIVFPEQKDPGK 359 Query: 467 ITQIADELRNVVSKPIMIDDKPFPLTLSIGIS---YDLGKNRDYLLSTAHNAMDYIRKNG 523 + +IA ++R+ V++ + +D + +T SIGIS +D G LL++A +AM Y + G Sbjct: 360 VHEIARKIRDCVAENMEVDGQSLSVTTSIGISLFPHD-GTTFRTLLASADSAMYYAKSKG 418 Query: 524 GNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHD 583 QF+S +N+ R+ + L+ I + L YQP++ TGE+ +EAL RW+ Sbjct: 419 SGQIQFYSGELNDSAALRIEMENDLRRGIEKEEFVLYYQPKVTLATGEVESVEALVRWNH 478 Query: 584 PLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRS 643 P G +PP FIP AEE G I +GRW++ ACR+ W+ ++VNLSAL F + Sbjct: 479 PEKGILPPHYFIPRAEETGLIIPLGRWIMDRACREAVIWQQAGFSRLRVAVNLSALQFIN 538 Query: 644 NQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGF 703 L ++ DA+ + G+ L +EITES++ME + + +R GV +++DDFGTG+ Sbjct: 539 QDLMKEILDALESSGLPPECLELEITESLLMEDPEGAMRTLSGIRQKGVHVAIDDFGTGY 598 Query: 704 SGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFE 763 S S L P+ +KID+SF+ A++ I ++G +LNL V+AEGVE++ Q E Sbjct: 599 SSFSYLKKFPLDRLKIDRSFITDICDNPNDAAIVRTIITLGHNLNLKVIAEGVESQAQLE 658 Query: 764 MLRKIHCRVIQGYFFSRPLPAEEI 787 ML+ + C QG+F SRPLP E+ Sbjct: 659 MLKAMECDAYQGFFNSRPLPPGEL 682 >UniRef50_B1XXA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XXA0_LEPCP Length = 771 Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 155/427 (36%), Positives = 238/427 (55%), Gaps = 17/427 (3%) Query: 375 LIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQAL 430 L FD +TGL NR + L+ + +A SP V + +DH + V D+LG+ D L Sbjct: 318 LAHFDTLTGLTNRAHFRVLLEAALQQARSPEQGGAVMCLDLDHFKTVNDTLGHPTGDALL 377 Query: 431 LEVVNRFREKLKPDQYLCRIEGTQF-VLVSLENDVSNITQIADELRNVVSKPIMIDDKPF 489 +EV R + + P + R+ G +F VL+ DV I+ A + + + +P Sbjct: 378 VEVARRLKAAVGPGDVVGRLGGDEFAVLLRNAADVQQISATAQRILDALREPCAALGAQV 437 Query: 490 PLTLSIGIS--YDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAA 547 P+ LSIGI+ G + D L+ A A+ + + +FF+P M E V+ RLVL Sbjct: 438 PVRLSIGIARFAQDGASVDELMQHADLALYDAKASAPGSMKFFAPRMGEQVRRRLVLERD 497 Query: 548 LKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENI 607 L+EAI QL L YQP++ +T E+ G EAL RW P HG++PPS FIP+AE+ G I I Sbjct: 498 LREAIDKQQLSLHYQPKVDLQTWEVTGFEALLRWRHPEHGNIPPSEFIPVAEDSGLILPI 557 Query: 608 GRWVIAEACRQLAEWRSQNIHIPA---LSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQL 664 G WV+ +AC+Q A W PA +++N+S + + LP V A+ A G+ +L Sbjct: 558 GEWVLTQACQQAARW-------PAPMQVAINISPVQVMAQNLPEAVGRALKASGLAPRRL 610 Query: 665 TVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFV 724 +EITES+ + R+ LR +GV +++DDFGTG+S L+ L P +KID++FV Sbjct: 611 ELEITESVFINETRGTVDRLHALRKVGVQIALDDFGTGYSSLAYLRRFPFDTLKIDRAFV 670 Query: 725 DRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPA 784 L + A++ I ++ +SL ++ VAEGVE Q +L C ++QG+ SRP+PA Sbjct: 671 REVLLSRDARAIVRNILALAKSLRMSTVAEGVEEPAQASVLGNEGCDLVQGFLVSRPMPA 730 Query: 785 EEIPGWM 791 +E+ G++ Sbjct: 731 DEVTGFL 737 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 213/713 (29%), Positives = 352/713 (49%), Gaps = 35/713 (4%) Query: 102 WTRFALSKVSAEGKVYYLAL----VRDASVEMA-QKEQTRQLIIAVDHLDRPVIVLDPER 156 WTR L ++ E + LAL R VE A ++ + + + +LD +++ + Sbjct: 221 WTRAELKRLIDELRAKTLALESDIARRREVEDALRRSENKYRELFWSNLD-GIVISSLDG 279 Query: 157 HIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTAR-DQDEFLLL 215 ++ N AF + Y + + +Q L PE R L + + D+ E + Sbjct: 280 QVIDANPAFLNLMCYSLDQLK-LQNFWSLIAPESEGMERFNLDNKVLRFGYCDEFEASYI 338 Query: 216 TRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER---QIRQLEGNILAAMCSSPPFH 272 R G + + + D + + DI+E+R + QL + Sbjct: 339 NRFGNVVPVSVKTVAMRDSFGRINAVWRMVRDISEKRVAEERMQLAAKVFENTVEGIMIT 398 Query: 273 EMGEIICRNIESVLNESHVSLFALRNGM---PIHWASSSHGAEIQNAQSWSATIRQRDGA 329 + + I R++ S ++ F + + P +S H A WSA G+ Sbjct: 399 DADKRI-RSVNRAF--SQITGFGQQEVLGQKPDMLSSGRHDETFYEAM-WSAI--NEHGS 452 Query: 330 PAGILQIKTSSGA------ETSAFIERVADISQHMAALA--LEQEKSRQHIEQLIQFDPM 381 G L + +G SA V +I+ ++A + E++ + + I+ L FD + Sbjct: 453 WQGELWNRRKNGEVYPEWLAISAVRNAVGEITHYVAIFSDLSERKAADERIQFLAHFDVL 512 Query: 382 TGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRF 437 TGLPNR ++ + ++ + A + L+ +D + + +SLG++ D L + R Sbjct: 513 TGLPNRAHIQDRVELAIQNATRDNERLALLLLDLDRFKTINESLGHSAGDALLQVLAERI 572 Query: 438 REKLKPDQYLCRIEGTQF-VLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIG 496 R L + + R G +F VL+ L D + A+ +R V+ P+ + + +T SIG Sbjct: 573 RSTLLTGEVVARQGGDEFIVLLPLIADPGSAALAAERIREVLEPPVELFNHSISITPSIG 632 Query: 497 ISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISN 554 IS D G++ + L+ A AM + + G N ++F++ +N +E L + + L+ A+ Sbjct: 633 ISVFPDDGRDFETLVRNADAAMYHAKSAGRNSYKFYTADLNARAREILEIESQLRYALDR 692 Query: 555 NQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAE 614 ++ L YQPQ+ +TGE+ G EAL RW P G + P RFI +AEE G I IG WVI E Sbjct: 693 DEFVLHYQPQVDLKTGEIIGAEALIRWQHPELGLLGPVRFIEVAEERGFIVQIGNWVIQE 752 Query: 615 ACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMM 674 ACRQLA+WR Q + +L+VNLS L FR L + A+ A G+ G L VE+TES++M Sbjct: 753 ACRQLAQWRRQGLPRISLAVNLSTLQFRQQDLAVHLQRALSAHGLVGSDLDVEVTESVIM 812 Query: 675 EHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRIL 734 + I ++ MG+ LS+DDFGTG+S LS L ++KID+SFV + Sbjct: 813 DDVETTIHTIDRIKSMGLQLSIDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPMDADDS 872 Query: 735 ALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 A+ AI ++ ++LN+TV+AEGVET EQ++ L + C QGY ++P+PA+E Sbjct: 873 AIARAIINMAKNLNMTVIAEGVETIEQWKFLDREGCHAAQGYLLAKPVPAKEF 925 >UniRef50_A1WTF5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Halorhodospira halophila SL1 RepID=A1WTF5_HALHL Length = 823 Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 166/463 (35%), Positives = 247/463 (53%), Gaps = 19/463 (4%) Query: 328 GAPAGILQIKTSSGAETSAFIERVADISQHMA---ALALEQEKSRQHIEQLIQFDPMTGL 384 G P G L + E F E + + +A AL+ Q+ L + D TGL Sbjct: 339 GEPVGALAVYAP---EAGFFSEEIRSLLVELAEDVGFALDHSAQLQY---LAEHDLTTGL 392 Query: 385 PNRNNLHNYLDDLVDKAVSP---VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKL 441 PNR+ L + + +A V + +D + V DSLG+ DQ L +V R E + Sbjct: 393 PNRSWLLGRVAQGIRRASDSERFAVAFVDLDRFKVVNDSLGHDAGDQLLRQVAERLGEMV 452 Query: 442 KPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVS---KPIMIDDKPFPLTLSIGIS 498 + + R G +F++ L +D+ + Q+A ++ V++ KP+ ID + +T S+G+S Sbjct: 453 RSGDEVGRHGGDEFLM--LLHDLESTEQVAQLVQRVLNRFRKPLRIDGREVAVTPSVGLS 510 Query: 499 YDLG--KNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQ 556 G + D ++ A AM + GGN ++FF+ MN V++R+ L A L+ A N+ Sbjct: 511 VYPGDAADADGMVRAADTAMHRAKDEGGNRYRFFTEEMNREVRQRVELEAMLRNAEQRNE 570 Query: 557 LKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEAC 616 L+L YQPQ+ TG++ G+EAL RWH P G + P FIP+AEE G I IG WVI AC Sbjct: 571 LELWYQPQVALSTGQVVGVEALLRWHHPDRGWISPGEFIPVAEESGLIGAIGEWVIGRAC 630 Query: 617 RQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEH 676 Q AEWR + + +++NLSA R LP + A+ + L +E+TES+ E Sbjct: 631 DQAAEWRGRGVLQVPVAINLSAAQLRGTGLPAVIQRALGRRSLPAEALQLEMTESLFFED 690 Query: 677 DTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILAL 736 D + I L+ G+ L+VDDFGTG+S L L LP+ +IKID+SF+ E + Sbjct: 691 DVNVRTAIAELQSRGLQLAVDDFGTGYSNLGYLKRLPLAKIKIDQSFIHGVPEEPEDCVI 750 Query: 737 LEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFS 779 AI + Q L L +AEGVE EQ E+LR++ C +QGY FS Sbjct: 751 TRAIIHMAQGLGLRAIAEGVERPEQLELLRQLGCDEVQGYLFS 793 >UniRef50_A0KIX5 PAS:GGDEF domain protein n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KIX5_AERHH Length = 992 Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 160/465 (34%), Positives = 260/465 (55%), Gaps = 18/465 (3%) Query: 342 AETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA 401 E S ++ DIS+ E+E +R HIEQL +D + GL NR +L++ + + +A Sbjct: 535 GEISHYVCSFYDISK-------EKEAAR-HIEQLAYYDDLCGLYNRRSLNDIMQRTLQEA 586 Query: 402 VSP--VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVS 459 + L+ +D+ + + DSLG+A D L VV R + + + L RI G +F L+ Sbjct: 587 SGQWGALLLVDLDNFKSINDSLGHACGDLLLQAVVERLKGLPQDNLVLARISGDEFALLF 646 Query: 460 LENDVSNIT------QIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGKNRDYL--LST 511 +T A EL + P I+D + S+GIS +++D+L + Sbjct: 647 SALGQGYVTAKILAEHFARELMGLFRIPFDIEDHKLHCSASVGISLFSSEDKDHLVLMQQ 706 Query: 512 AHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGE 571 A A +++G + FFS AM E K +L L L++A+ +++L+L YQPQ + G Sbjct: 707 ADTATHMAKRSGQGNYVFFSEAMAEKEKSKLALNNQLRDALRHHELQLHYQPQYRVDNGA 766 Query: 572 LYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPA 631 L GIEAL RW VPP+ FIP+AEE I++IG WV+ AC Q + W ++ + IP Sbjct: 767 LSGIEALLRWQRSDGSMVPPAEFIPIAEETSLIQDIGYWVMKTACAQYSFWLNRGLAIPH 826 Query: 632 LSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMG 691 LSVN+SA F + QV + G+ +L +E+TES+++E+ E R++ L+++G Sbjct: 827 LSVNVSARQFHTVGFVQQVEYILRDTGVPPSRLLLEVTESVVLENRLESIARMRQLKELG 886 Query: 692 VGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTV 751 + LS+DDFGTG+S L+ L LP E+K+D+SF+ + ++ A+++AI + + TV Sbjct: 887 ILLSIDDFGTGYSSLAYLRDLPADEVKLDRSFIQTLVHSEQDKAIVKAILELAKVFRFTV 946 Query: 752 VAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLP 796 AEGVE +EQ +L+ + C+ QG+ SRPL A+ + + + +P Sbjct: 947 TAEGVEDEEQLAILKSLGCQHYQGFLTSRPLTAKALESLLGAAVP 991 >UniRef50_Q3A254 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A254_PELCD Length = 874 Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 162/457 (35%), Positives = 256/457 (56%), Gaps = 12/457 (2%) Query: 347 FIERVADISQHMAA-LALEQEKSRQHIEQLIQFDPMTGLPNRNN----LHNYLDDLVDKA 401 F V DI++ AA L ++K+R + L D +TGLPNR L Y+ + Sbjct: 408 FFVLVRDITERKAADTMLRKQKAR--LNYLAYHDVLTGLPNRLKAIELLQTYIGRANQRD 465 Query: 402 VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE 461 V + +D +++ +SLG+ D+ L+EV R +E L+ + R G +F LV LE Sbjct: 466 TMVAVLIFDLDRFKNLNESLGHETGDEILMEVARRIQEMLRDTDVVARFGGDEF-LVLLE 524 Query: 462 N--DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMD 517 + D + + +A++L +++P+ I ++ F LT SIGIS G+N +L A +AM Sbjct: 525 HVADSTGVKHVAEKLLEAIAQPLRIGEQQFYLTGSIGISLYPKHGENAQTILKAADSAMY 584 Query: 518 YIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEA 577 + ++ G N ++FF P++N V+ERL L L++A++ Q L YQP+ TG++ +E Sbjct: 585 FAKEQGRNTYRFFIPSINVEVEERLYLETDLRQALNLEQFMLFYQPEFNLHTGKVECLET 644 Query: 578 LARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLS 637 L RW P G V P FIPLAE+ G I IG WV+ EACRQ+ WR Q + ++VN+S Sbjct: 645 LLRWQHPKRGIVGPGEFIPLAEDTGLIVPIGEWVLQEACRQVIAWREQGLPSIRVAVNIS 704 Query: 638 ALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVD 697 A FR + V + +G+ L +EITES +++ ++LR G+ L+VD Sbjct: 705 ARQFRQSGFIEMVFRVLKQYGLAAEWLELEITESFVIQSAEHALNMFKVLRQSGISLAVD 764 Query: 698 DFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVE 757 DFG G+S LS L P T++K+D++FV + + A+ AI ++G SL VVAEG+E Sbjct: 765 DFGQGYSSLSYLRKFPFTKLKMDRAFVKNVVNDPHDEAIAAAIIAMGDSLGQEVVAEGIE 824 Query: 758 TKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 T+EQ + LR + C QGY+ + P+ ++ ++ V Sbjct: 825 TREQLDTLRTLGCPCGQGYYLALPMEGPKMAEFLQRV 861 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 152/433 (35%), Positives = 245/433 (56%), Gaps = 11/433 (2%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNR----NNLHNYLDDLVDKAVSPVVYLIGVDHIQDVID 419 E++ + + ++ + D +TGLPNR L N L D V I +D + V D Sbjct: 492 ERKMAEERVKHMALHDALTGLPNRLLLEERLENALSDAKSHQWQLAVLFIDLDRFKLVND 551 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVS 479 +LG+ DQ L+EV NR + + + + R+ G +FV+V N+++ T+I + ++ Sbjct: 552 TLGHHEGDQLLVEVANRLHQVIGANDTVARLGGDEFVIVL--NEIAGSTEINGVIEDIQQ 609 Query: 480 --KP---IMIDDKPFPLTLSIGISYDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAM 534 KP + + D ++ + I + G+ L+ A AM + + +G N Q+F+ ++ Sbjct: 610 NFKPAVKLALQDMFVTPSIGVAIYPEDGETPVQLMKNADAAMYHAKASGRNCAQYFNRSL 669 Query: 535 NEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRF 594 ++ +KER+ L AL +A+ Q +L YQPQ+ ++ + G EAL RW+ P G + P F Sbjct: 670 DDSLKERISLENALNQALKLGQFELYYQPQLDVKSNRIIGAEALIRWNHPEKGMISPDAF 729 Query: 595 IPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAM 654 IPLAEE G I +IG WV+ +A QLA+WR Q ++SVNLSAL + +V+D + Sbjct: 730 IPLAEESGLIVDIGSWVLHQASSQLAQWRKQGFDQLSVSVNLSALQVQKESFAREVADVI 789 Query: 655 HAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPV 714 +G+ L +E+TESM+M + E + + ++G+ +SVDDFGTG+S LS L P+ Sbjct: 790 REYGVPEACLDLELTESMIMRNAEETIAALDKIHNLGIQISVDDFGTGYSSLSYLKRFPL 849 Query: 715 TEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQ 774 ++KID+SFV + + + I S+ +LNL V+AEGVET Q E+LR C Q Sbjct: 850 DKLKIDRSFVQDITVDTDDAMICKTIISMAHNLNLQVIAEGVETNAQLELLRDYGCEQYQ 909 Query: 775 GYFFSRPLPAEEI 787 GY F++PLP E++ Sbjct: 910 GYLFAKPLPVEQM 922 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 47/206 (22%), Positives = 94/206 (45%), Gaps = 43/206 (20%) Query: 44 LWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKAR---VEGM--SRELQLEKKDG 98 ++ Y+ EE+IG + +L +P++ + G A +EG ++++++++KDG Sbjct: 247 IYDYRVEELIGQSSSIL--------YPDFEAFSELGDSAYPSLMEGTLYTQKMKMKRKDG 298 Query: 99 SKIWTRFALSKVSA-EGKVYYLALVRDASVEMAQKEQTRQLI----IAVDHLDRPVIVLD 153 + WT+ + +S+ E + Y+ +V D ++ E + ++ + +D+ ++ L Sbjct: 299 TLFWTQIRGNIISSNEPGLGYIWIVEDIDQQVKADEALKVILNEQNLILDYAMVGIVFL- 357 Query: 154 PERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARD----- 208 R + +CN+ F EMFGY E +G + + L + WK A Sbjct: 358 KNRSVTRCNQRFEEMFGYNAGELAG------------SSSRQWYLTEQDWKAAGKACYKP 405 Query: 209 -------QDEFLLLTRTGEKIWIKAS 227 QDE LL + G IW + + Sbjct: 406 LSQGKVFQDEMLLSRKDGSPIWCEVT 431 >UniRef50_A1TMD5 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TMD5_ACIAC Length = 687 Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 154/427 (36%), Positives = 243/427 (56%), Gaps = 7/427 (1%) Query: 365 QEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDS 420 Q +++ IEQL D +TGLPNR L + ++ A + + I +D + + DS Sbjct: 247 QHAAQKRIEQLAYSDVLTGLPNRLLLSRCVASALETARAQGGGFAILFIDLDRFKIINDS 306 Query: 421 LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSK 480 LG+ + D+ L V R R L+ + LCR+ G +FVL E D S +A + + + Sbjct: 307 LGHLFGDRVLQLVAQRLRGCLRQNDMLCRLGGDEFVLHLDEGDASMAEAVACRILEEMRQ 366 Query: 481 PIMIDDKPFPLTLSIGISYDL--GKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMV 538 P M+D F + SIGI+ G+ D L+ A AM +++ G + F+ P MN + Sbjct: 367 PFMLDGMGFSIQCSIGIALHPRDGETLDDLIKQADTAMYRVKERGRGSYGFYHPQMNADM 426 Query: 539 KERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLA 598 R+ L A+++A+ + YQPQ+ +G + G EAL RW+DP G V P FIPLA Sbjct: 427 LSRMQLEHAMRQALDRGDFAVHYQPQVEMASGRVVGAEALLRWNDPGLGAVSPGVFIPLA 486 Query: 599 EEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWG 658 EE G I +G WV+ +A R+ AEW + ++VN+SAL FR + ++ + + G Sbjct: 487 EESGYIVTLGAWVLEQAIREAAEWMRAGTPL-VVAVNVSALEFRQSGFVERLVALLRSHG 545 Query: 659 IDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIK 718 + L +E+TE+++++ E+ +R+ L ++GVGLS+DDFGTG+S L+ L L + ++K Sbjct: 546 LPASLLELELTETILLQDAQEMAQRLAALAELGVGLSIDDFGTGYSSLAYLKKLRIHKLK 605 Query: 719 IDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFF 778 ID+SFV ++ A++EAI IG++L + VVAEGVET +Q E L+ + C QG+ Sbjct: 606 IDQSFVRGLPDDESDRAIIEAIVHIGRALRIRVVAEGVETPQQREALQALQCHYFQGFLV 665 Query: 779 SRPLPAE 785 + LPAE Sbjct: 666 APGLPAE 672 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 234/819 (28%), Positives = 386/819 (47%), Gaps = 87/819 (10%) Query: 28 INENDEVMFF--NPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVE 85 I + D + F N AA + +GY E + + R +RP H E R ++ V Sbjct: 240 IFDRDTLRFLAVNAAAVQQYGYSESEFLAMTV-----RAIRP-HSEVARLETHLQRSDVT 293 Query: 86 -GMSREL----QLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEM---AQKEQTRQ 137 G R + +KDGS+I + ++ G+ L D + ++ A+ +++ Q Sbjct: 294 PGGPRTMAGVWHHRRKDGSQISADISYHAMTFMGRPALFVLADDVTEQINAEAEAQRSNQ 353 Query: 138 LI-IAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFP-ADNR 195 ++ +D++ + + D E + CN AF G E + D + F A R Sbjct: 354 MLETVIDNIPQRIFWKDKELRYLGCNMAFARDAGLAYPEQVIGKRDEDMPWRAFAEALGR 413 Query: 196 IRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER--- 252 +L + E L+ + + + + P D + ++ +++DITE + Sbjct: 414 QDTDVMLSGVPKMNYETDLVIDGVHRTTVTSKL-PFTDSDGRVIGVLGSYTDITERKRAD 472 Query: 253 -----QIRQLEGNILAAMCSSPP-----------------FHEMGEII---CRNIESVLN 287 Q R L+ ++ A + + P ++ E+I CR ++ + Sbjct: 473 LALRLQSRALDASVNAILITEPSKEGNLIEYVNPAFKRITGYDPQEVIGQDCRLLQRD-D 531 Query: 288 ESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIR--QRDGA----PAGILQIKTSSG 341 + A+R + + + SA +R ++DGA I + + G Sbjct: 532 RDQEGIAAIRQALAAN-------------REVSAVLRNYRKDGALFWNQLYIAPVPDADG 578 Query: 342 AETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV--- 398 +T+ I + D++ AL QE+ +E +D +T LPNRN L + L + Sbjct: 579 -QTTHHIAVINDVT----ALIRYQEQ----LEYQANYDSLTRLPNRNLLRDRLQHALIVA 629 Query: 399 ---DKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF 455 K V+ V I +D ++V DSLG++ D+ L V +R + + R G +F Sbjct: 630 QRHHKGVA--VVFIDLDGFKNVNDSLGHSVGDRLLSVVADRLARCARASDTVARHGGDEF 687 Query: 456 VLVSLEN-DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTA 512 V+V + D ++ + +R +S+P+ +D + S+G S G + + L+ A Sbjct: 688 VIVMTDTVDEQSLIAWMERVRASISEPVWLDGTELYVGCSMGASLFPQDGDDAETLMKKA 747 Query: 513 HNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGEL 572 AM + G N +QF+ P MN RL L L+ A+ +N+ L YQPQ+ ETG++ Sbjct: 748 DLAMYRAKDMGRNTFQFYQPEMNVSAGARLNLERRLRRALRDNEFLLHYQPQVDIETGQV 807 Query: 573 YGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPAL 632 G+EAL RWHDP G +PPS+FIP+AEE G I + WV+ EACRQ W+ + + + Sbjct: 808 VGMEALVRWHDPEVGLIPPSQFIPVAEESGLIGPLSEWVLREACRQNKAWQDEGLPPARV 867 Query: 633 SVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGV 692 SVNLSA F+ + V + G+D L +E+TES +M + E + L +G+ Sbjct: 868 SVNLSARQFQQRDIAKLVMQVLEETGLDPQYLELELTESTIMRNAEEAVSMLNELHALGI 927 Query: 693 GLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVV 752 GL++DDFGTG+S LS L PV +KID+SFV + AI ++ SLNL V+ Sbjct: 928 GLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGESSDDETITSAIIALAHSLNLQVI 987 Query: 753 AEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 AEGVET Q + L++ C +QGYFF++PLP IPG + Sbjct: 988 AEGVETSTQLDFLKERACDEMQGYFFAKPLPHHAIPGML 1026 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 151/431 (35%), Positives = 242/431 (56%), Gaps = 9/431 (2%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVID 419 E++ + + +E L D +TGL NR H+ L+ + A V L+ +D + + D Sbjct: 262 ERKINEEQLEYLATHDELTGLANRALFHDRLEQSLHYAKRSGRIVAVLLLDLDRFKIIND 321 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVV 478 SLG+++ D+ L V R ++ + R+ G +FVL+ E + ++ +A + + + Sbjct: 322 SLGHSFGDRLLSAVAQRLDRVVRDTDTVARLGGDEFVLLLAEVTEPDDVGLLASRILHEL 381 Query: 479 SKPIMIDDKPFPLTLSIGISY---DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMN 535 + P I+ + ++ S+GIS D G L+ A AM ++ GG + F++P MN Sbjct: 382 AVPHRIEGREIVMSASLGISLYPKDSGDG-STLIRNADIAMYRAKQEGGGVFSFYAPEMN 440 Query: 536 EMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFI 595 + E + + +AL+ A+ + L YQP++ +G + G EAL RW P G V P+ FI Sbjct: 441 QRAMETMEIESALRLALERGEFTLYYQPKVDLASGRISGCEALIRWLHPRRGVVAPADFI 500 Query: 596 PLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMH 655 PLAEE G I IG WV+ EACRQ+ W+++ + I ++VNLSA FR+ LP V + + Sbjct: 501 PLAEETGLIVPIGTWVLKEACRQVRAWQAEGVPIANVAVNLSARQFRTGDLPGLVREVLG 560 Query: 656 AWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVT 715 G+D H L +E+TESM+M ++ ++ L +GV LS+DDFGTG+S + L P+ Sbjct: 561 ETGLDPHLLELEMTESMVMADHAQVVAVMEELTAIGVRLSLDDFGTGYSSFAHLSHFPIN 620 Query: 716 EIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQG 775 +KID+SF+ + +T+ + +I ++ + L +AEGVET+ Q LRK C IQG Sbjct: 621 HLKIDRSFIKQIVTDPNSATIATSIIAMAHRMRLKAIAEGVETEAQLAYLRKQGCDEIQG 680 Query: 776 YFFSRPLPAEE 786 Y SRPLPA E Sbjct: 681 YLLSRPLPASE 691 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 206/759 (27%), Positives = 356/759 (46%), Gaps = 85/759 (11%) Query: 101 IWTRFALSKVS-AEGKVYYLALVRDASVEMAQKEQTRQ-----LIIAVDHLDRPVIVLDP 154 +++R L + AE ++ A+ A +E + E+ R L +D + PV D Sbjct: 133 VFSRRPLGDIEMAETALHLFAMRAAAELERIKIERQRDEELHFLQSLLDAIPNPVFYKDL 192 Query: 155 ERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLL 214 + + CNR++ ++ + G + ++ P A IR ++ +A Sbjct: 193 DSRYLGCNRSYEDLLRKSRQDIIGHRAADVM--PPLRAVVAIREDNKVYDSA-------- 242 Query: 215 LTRTGEK---------IWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNIL--- 262 L+RT E + + + +P +D L LV T DI+ R+++ +++ Sbjct: 243 LSRTYESTIEEPDHGTMQVLFNKAPFFDQDGELAGLVGTIQDISSLREMQSAMQSLVEST 302 Query: 263 AAMCSSPPFHEMGEIICRNIES-------VLNESHV-SLFALRNGMPI------------ 302 S + + + +C+ ++ + E V SL +++G+ + Sbjct: 303 VGFTGSNCYRRVAQQLCQWFDADCAIVGRIQEEGKVLSLATIQDGVSMPSYSFNLSDTPC 362 Query: 303 -----------------HWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETS 345 H+ + S ++ IR +G G+L + + ++ Sbjct: 363 EKVVDEGMCLMSEGVMEHYPNCSLVTQMHAEGYVGTPIRDHNGEVLGVLSVLSRGKIKS- 421 Query: 346 AFIERVADISQHMAALA---LEQEKSRQ-------HIEQLIQFDPMTGLPNRNNLHNYLD 395 +ER D+ MAA +E+E S Q H+E L+ D +T LPNR + L Sbjct: 422 --LERAKDVLAIMAARVSAEIEREISEQRLRDNEDHLEYLVYHDVLTDLPNRQLFRDRLQ 479 Query: 396 DLVDKAV----SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIE 451 + A V I +DH + + DSLG+ D+ L EV R R + + R+ Sbjct: 480 HAISMASLGQHQVGVLFIDLDHFKKINDSLGHEVGDRLLCEVARRLRLCIGGLDTVARLS 539 Query: 452 GTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGKNRDY--L 508 G +F ++ + N++ N+ IA E+ +++ ++++ LT SIGIS G +D L Sbjct: 540 GDEFAIILDQLNNIENVILIAQEVNRRLAEMMVVEGYKLFLTASIGISLYPGDGKDVVSL 599 Query: 509 LSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAE 568 L A AM ++ G + ++F++ +NE E L L AL++A+ N L + +QPQ+ Sbjct: 600 LKCADAAMFKAKELGRDNYRFYTAGLNERASELLALEGALRQAVDKNHLVVYFQPQVELA 659 Query: 569 TGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIH 628 + + G EAL RW P +G + P FIP+AEE G I +IG WV+ ++C Q +W+ Sbjct: 660 SRRIIGAEALVRWQHPENGMISPVDFIPMAEETGLIVSIGEWVLRQSCLQARQWQVAGYP 719 Query: 629 IPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILR 688 +SVN+SA FR L V + G+ L +EITES++M +R+ L Sbjct: 720 PMRISVNMSARQFRQKDLVPMVRRILQETGLSPEYLDLEITESILMNDVDGAVERLVELH 779 Query: 689 DMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLN 748 +G+ LS+DDFGTG+S L+ L P+ +KID+SFV + + A+ A+ + +++N Sbjct: 780 SLGIQLSIDDFGTGYSSLAYLKKFPIQYLKIDRSFVRDVIIDPNDAAIATAVIDLARNMN 839 Query: 749 LTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 L V+AEG+E ++Q + L C QGY FSRP+PA E Sbjct: 840 LNVIAEGIEQQDQHQFLLDRGCGYGQGYLFSRPIPAHEF 878 >UniRef50_Q60A84 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q60A84_METCA Length = 810 Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 150/427 (35%), Positives = 239/427 (55%), Gaps = 7/427 (1%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNR----NNLHNYLDDLVDKAVSPVVYLIGVDHIQDVID 419 E ++ R+ I++L FDP+T LPNR + + L D + + L+ +D ++V D Sbjct: 372 EVDEYRRRIQRLAFFDPLTDLPNRALLNDRIRQCLTDAAARGSQFGLMLLDLDRFKEVND 431 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLENDVSNITQIADELRNVV 478 +LG++ D+ L E R ++ + R+ G +F +L+ + D ++ IA + Sbjct: 432 TLGHSAGDRLLCEAARRLNACVRGYDTVARLGGDEFSILLPVVRDRGDLRAIAGRILEAF 491 Query: 479 SKPIMIDDKPFPLTLSIGISYDL-GK-NRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNE 536 + +I+ K +++SIGI + G+ + D L A AM + ++ G N +QF++ + Sbjct: 492 GEAFIIEGKELFVSVSIGIVLHMEGQCDADRLFKQADLAMYHAKRQGRNNFQFYAEELAV 551 Query: 537 MVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIP 596 V +R + AL++A+ N +L+L YQPQ+ G + G EAL RW P G + P RFIP Sbjct: 552 QVSDRTAMEGALRKALGNGELELYYQPQVALPAGRIVGAEALLRWRHPQEGIMTPDRFIP 611 Query: 597 LAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHA 656 +AEE G I ++G WV+ ACR+ W ++VNLS F N LP ++ + Sbjct: 612 IAEETGLIRDLGHWVLTTACRRAVYWHRTVDSPFKVAVNLSTRQFVRNDLPGELQRIVQD 671 Query: 657 WGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTE 716 G L +EITES+++ +D E+ ++ L DMG +S+DDFGTG+S LS L P+ + Sbjct: 672 TGCRPEWLELEITESLLLGNDAEVGAALEELHDMGFAISIDDFGTGYSALSYLNRFPLDQ 731 Query: 717 IKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGY 776 IKID+SF+ ++ + L++AI SI +L L V+AEGVET Q E L CR+ QG+ Sbjct: 732 IKIDRSFIQGFPADREKVELVKAIISIAGALQLEVIAEGVETSHQAEYLHAQGCRLAQGH 791 Query: 777 FFSRPLP 783 F RPLP Sbjct: 792 LFGRPLP 798 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 271 bits (694), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 178/479 (37%), Positives = 266/479 (55%), Gaps = 25/479 (5%) Query: 322 TIRQRDG--APAGILQIKTSSGAETSAFIER--VADISQHMAALALEQEKSRQHIEQLIQ 377 T RDG PA ++ S A ++FI V DISQ A ++EK +E L Sbjct: 166 TALHRDGHEFPA---EMSISPQAVGASFIFNIFVRDISQRKA----DEEK----LETLAT 214 Query: 378 FDPMTGLPNRNNLHNYLDDLVDKAV----SPVVYLIGVDHIQDVIDSLGYAWADQALLEV 433 D +TGL NR + ++ L V A S V + +D +++ DSLG+ DQ L E Sbjct: 215 RDELTGLINRFSYNHLLKKEVALAKRHMESLAVLFLDLDGFKNINDSLGHDVGDQLLRET 274 Query: 434 VNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLT 492 NR ++ + RI G +F+++ DV + + + + N++ +P +I + + Sbjct: 275 ANRLSACIRESDTVARIGGDEFLIIMPGIKDVHDPRFLCERILNMIGQPYLIGTQECFVG 334 Query: 493 LSIGIS-YDL-GKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKE 550 SIGIS Y L G N + L+ A AM + +G N ++FF+PAM E +R+ + AL+ Sbjct: 335 ASIGISLYPLDGDNVESLVKNADTAMYQAKDSGRNAYKFFTPAMGEEAFKRMEMERALRY 394 Query: 551 AISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRW 610 AI NQ KL+YQPQ+ +G + G+EAL RW P G + PS FI L E I IG W Sbjct: 395 AIEKNQFKLLYQPQVELSSGRILGVEALLRWTHPEWGPISPSVFISLIENTNLILPIGEW 454 Query: 611 VIAEACRQLAEWRSQNIHIPA-LSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEIT 669 V+ EAC+Q W++ + P ++VN +A F L V+ A+ G+ L +EIT Sbjct: 455 VLDEACKQNKAWQALHPGFPLRMAVNFAARQFAQADLVETVAKALQKSGLAAEFLELEIT 514 Query: 670 ESMMMEHDTEI-FKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCL 728 E M +D E+ +++Q L+++GV +++DDFGTGFS L+ L P+ +KIDKSF+D Sbjct: 515 EGSAM-NDIELNIRKMQALKELGVSIAIDDFGTGFSSLAYLKRFPIDILKIDKSFLDEIQ 573 Query: 729 TEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 K+ A++ I+ + SL + V+AEGVETK Q E LR C +IQGY FSRP+P E+I Sbjct: 574 HGKKDAAIVATISEMAHSLGMEVIAEGVETKYQLEFLRGHGCDMIQGYLFSRPVPPEQI 632 >UniRef50_A0KIJ4 MorA n=2 Tax=Aeromonas RepID=A0KIJ4_AERHH Length = 838 Score = 271 bits (694), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 163/474 (34%), Positives = 249/474 (52%), Gaps = 27/474 (5%) Query: 327 DGAPAGILQIKT---SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTG 383 DG P +I T E S F+ DIS E++++ + I+ L +D +TG Sbjct: 346 DGYPYPQWEIVTPVQDDRGEISHFVICFEDIS--------ERKEAERRIQDLAYYDELTG 397 Query: 384 LPNRNNLHNYLDDLVDKAVSPVVYLIG------VDHIQDVIDSLGYAWADQALLEVVNRF 437 LPNR LH L +A YLIG +DH + + DSLG+A D L EV +R Sbjct: 398 LPNRRQLHETLAHAFGEASRD--YLIGALLFIDLDHFKTINDSLGHATGDWLLKEVASRL 455 Query: 438 REKLKPDQYLCRIEGTQFVLVSLENDVS------NITQIADELRNVVSKPIMIDDKPFPL 491 + ++ L R+ G +FVL+ S IA+ L + ++ P + + Sbjct: 456 KRLVRQGDCLARLGGDEFVLLLPSLSASPPQAEMQADLIAERLISEIAAPYNHAGQVLHI 515 Query: 492 TLSIGISYDLGKNR--DYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALK 549 S+GI+ G+ + D LL A AM + G +FF +M RL++ L+ Sbjct: 516 GASVGITLFPGREQGVDDLLKQADTAMYQAKSAGRKTRRFFDASMQLQADRRLLIHNELR 575 Query: 550 EAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGR 609 A++ +L L YQPQ E G++ G+EAL RW P V P+ FIP+AEE I +IG Sbjct: 576 SALNQQELTLYYQPQHMVEGGDIIGVEALIRWQPPGRALVSPAEFIPIAEETDLIVDIGN 635 Query: 610 WVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEIT 669 WV+ EAC Q W IHIP LSVN+SA F + +++ D + + G+D L +EIT Sbjct: 636 WVLYEACAQYVRWEENGIHIPQLSVNVSAKQFHATDFVDRIHDVLASTGMDPASLNLEIT 695 Query: 670 ESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLT 729 ES+++ H + ++ L+ +G+ ++DDFG G+S LS L LP E+KID+SF+ Sbjct: 696 ESVVLGHAEDTISKMSELKALGISFAIDDFGAGYSSLSYLKRLPADELKIDRSFIQDIPR 755 Query: 730 EKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLP 783 + +A++EA+ ++ + + V AEGVE+++Q E L+ C QGY S+PLP Sbjct: 756 DGDNMAIVEAVIAMARHMGFNVTAEGVESRQQLEFLQAQGCHFYQGYLASKPLP 809 >UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q609J7_METCA Length = 712 Score = 271 bits (694), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 153/438 (34%), Positives = 243/438 (55%), Gaps = 7/438 (1%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVID 419 ++ ++ I+ L DP+T LPNR LH L+ ++ A V I +D+ + + D Sbjct: 271 QRREAEDRIKHLAHHDPLTNLPNRVFLHGRLEQAIELARREQNQVAVMFIDLDNFKRIND 330 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQ-IADELRNVV 478 +LG+ D L +V R E + Q + R+ G +F++V N VS + +A+ + + Sbjct: 331 TLGHRIGDALLEQVAARLTENVPGSQVVGRLGGDEFIVVITGNRVSTTSAAMAERILESL 390 Query: 479 SKPIMIDDKPFPLTLSIGIS-YDL-GKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNE 536 +P ++D SIGI+ Y G + + L+ A AM + + G N ++FFS A+N Sbjct: 391 CRPYTVEDYQLHSGASIGIAIYPADGNSAETLMKHADAAMYHAKSRGRNTFEFFSQAINR 450 Query: 537 MVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIP 596 V+ERL + L++A+ + KL YQPQI TG + +EAL RW PL G + P RFIP Sbjct: 451 GVRERLDIENGLRDALKHGGFKLHYQPQIDLTTGSICSVEALLRWRHPLLGVIAPDRFIP 510 Query: 597 LAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHA 656 +AEE I +G WVI AC QL WR+ I ++VN+S + + + Sbjct: 511 IAEETKLILPLGLWVIDRACHQLRAWRNDGIAGVRMAVNVSVKQLQDESFFEALGSIVER 570 Query: 657 WGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTE 716 G+ G + +EITES +ME+ + + ++ L+D G+ LS+DDFGTG+S L RL LP+ Sbjct: 571 HGLSGSDIELEITESAIMENLSRVQALLKSLQDYGITLSIDDFGTGYSSLGRLKLLPIQS 630 Query: 717 IKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGY 776 +KID+SFV T+ + + I ++G SL L ++AEGVET Q +L+ C IQG+ Sbjct: 631 LKIDRSFVHDIETDHGNAKICDGIIALGHSLGLKIIAEGVETDAQKNLLQNSGCDAIQGF 690 Query: 777 FFSRPLPAEEIPGWMSSV 794 ++PLPA+++ ++ V Sbjct: 691 LIAKPLPADDVAKLITQV 708 >UniRef50_Q47C60 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodocyclaceae RepID=Q47C60_DECAR Length = 714 Score = 271 bits (694), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 159/440 (36%), Positives = 249/440 (56%), Gaps = 14/440 (3%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD----KAVSPVVYLIGVDHIQDVID 419 E+ + + ++ DP+TGLPNRN L + L V K+ + + +D+ + + D Sbjct: 276 ERHRYQSVLQHQATHDPLTGLPNRNLLEDRLAQAVQLARRKSSKVALAFVDLDNFKVIND 335 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVV 478 SLG+A DQ L+E+ +R R L+ + R G +FVL+ E +++ + + + + Sbjct: 336 SLGHAAGDQLLIEISSRLRAALRGLDTVARYGGDEFVLILGEQTSMADTMHLLERVLVSI 395 Query: 479 SKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNE 536 P+ ++ + SIG+S D ++ D LL A AM + +++G + F++ +N+ Sbjct: 396 QAPLALEGHGLRINCSIGVSVFPDDAQDLDGLLRVADVAMYHAKESGKGQYCFYTRDLNQ 455 Query: 537 MVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIP 596 ++R L AL AI NN+L +VYQP++ E G + G EAL RW+ G V P RFIP Sbjct: 456 AAQDRFSLETALGSAIENNELTVVYQPKVDGE-GMVRGFEALVRWNSAGRGLVTPDRFIP 514 Query: 597 LAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHA 656 LAEE G+I IG V+ ACR A W + +++VNLSA R LP V+DA+ Sbjct: 515 LAEETGQILAIGEQVLYAACRTAANWPLIDGQALSVAVNLSARQLREPGLPGLVADALAV 574 Query: 657 WGIDGHQLTVEITESMMM---EHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLP 713 G+ L +E+TESM+M EH+ + K I+ L GV ++VDDFGTG+S L+ L LP Sbjct: 575 SGLPPECLELEVTESMIMGDMEHNIRVLKSIKAL---GVRIAVDDFGTGYSSLAYLQRLP 631 Query: 714 VTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVI 773 + +KID+SFV C + +A+ AI +G++L+L +VAEGVET E+ +L C Sbjct: 632 IDTLKIDRSFVSGCNRGGKAMAIPHAIIFLGKTLDLHIVAEGVETDEERAILAVCGCNEF 691 Query: 774 QGYFFSRPLPAEEIPGWMSS 793 QGY FSRPL + + ++ + Sbjct: 692 QGYLFSRPLQSAAVDTYLQA 711 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 271 bits (694), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 164/454 (36%), Positives = 245/454 (53%), Gaps = 12/454 (2%) Query: 348 IERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPN----RNNLHNYLDDLVDKAVS 403 I IS + A QEK +E+L +D +T LPN R+ L + + Sbjct: 600 ITHYVGISNDLTATKQTQEK----LEELTHYDQLTSLPNILLFRDRLQQAMARARREEHK 655 Query: 404 PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLEN 462 + + +D ++V DSLG++ D L EV R R++L +CR G +F +L+ Sbjct: 656 VALLIFDLDRFKEVNDSLGHSVGDLVLTEVAQRLRQQLSLADTICRPGGDEFYLLLGRLT 715 Query: 463 DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIR 520 D+ Q A + + SKP D LT SIGI+ D G+ + L+ + AM + + Sbjct: 716 DIDTAVQAAQNVLELFSKPFQAADHQLYLTPSIGITLFPDDGEEVESLIQSVETAMYHAK 775 Query: 521 KNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALAR 580 K+GGN +QFF M R+ + L+ A+ + +L YQP+I A+ + G EAL R Sbjct: 776 KDGGNSFQFFQETMFTAALGRMTMKNRLRRAVELEEFELYYQPKIAADGRTVVGAEALIR 835 Query: 581 WHDPLHGH-VPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSAL 639 W P G V P+ FIPLAEE G I IG WV+ +ACRQ W+ + ++VNLSA+ Sbjct: 836 WVQPERGGPVSPAEFIPLAEETGLIIPIGEWVLRQACRQSLLWQQAGLPPLRIAVNLSAV 895 Query: 640 HFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDF 699 F+ L ++++ + G+ L +EITES++ME T + L+DMG+ L++DDF Sbjct: 896 QFKQPGLDDEINWILQEIGLPAELLELEITESLLMEDVTTANATLWKLKDMGIHLALDDF 955 Query: 700 GTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETK 759 GTG+S LS L + P+ +KID+ FV T+ A++ I ++ SL + VVAEGVE Sbjct: 956 GTGYSSLSYLKNFPLDTLKIDREFVRDLSTDDEDRAVIITIITLAHSLKMEVVAEGVEDA 1015 Query: 760 EQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 +Q LR+ C V QGY FSRPLPA+E ++ S Sbjct: 1016 DQVAFLRQRGCDVFQGYHFSRPLPAKEFEQFLRS 1049 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 55/230 (23%), Positives = 106/230 (46%), Gaps = 15/230 (6%) Query: 34 VMFFNPAAEKLWGYKREEVIGNNIDMLI-PRDLRPAHPEYIRHNREGGKARVEGMSRELQ 92 +M +N A++L+GY +E + L+ P +L + + RE ++E ++ Sbjct: 397 IMTWNQGAQRLFGYTAQEASHRPLSFLLAPHELDFYQGQVLPQLRERLSYQIE-----IE 451 Query: 93 LEKKDGSKIWTRFALSKVSAEG----KVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRP 148 ++ K G + + F+L++ S EG + + RD + ++E+ R ++ + Sbjct: 452 VQTKHGDRRFADFSLTQFSPEGGGSTRGGIICYARDITERQKREERMRLSSRFLEDTNEA 511 Query: 149 VIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARD 208 V++ D + I++ NRAF ++ GY EA G P +L + AD + L T Sbjct: 512 VVITDADARIIEVNRAFEKLTGYSRQEAIGQNP-RILQSGHYDADFYREMWDTLLTTGHW 570 Query: 209 QDEFLLLTRTGE--KIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQ 256 + E + E W+ SIS VYD + + V +D+T +Q ++ Sbjct: 571 EGELWSRRKNNELHPKWL--SISAVYDQRGRITHYVGISNDLTATKQTQE 618 >UniRef50_A8GYS2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Shewanella RepID=A8GYS2_SHEPA Length = 1072 Score = 271 bits (694), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 146/430 (33%), Positives = 244/430 (56%), Gaps = 10/430 (2%) Query: 378 FDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEV 433 FD +T LPNR+ + L +D A + ++ I +D + + + G+A ++ L + Sbjct: 633 FDSLTKLPNRHLFSSRLQQAIDSAHNTNSQVAIFFIDLDRFKFINELHGHAAGNKVLKQS 692 Query: 434 VNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTL 493 R L PD + RI G +FV++S + Q+A +L + ++KP + D+K ++ Sbjct: 693 ATRLEAVLGPDDSIARIGGDEFVVISPQTGNVGAEQLAQKLSDTLAKPYLFDNKETIISS 752 Query: 494 SIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEA 551 S GI++ + G++ + LL + AM +++G +Q+FSP MN + ER+ L L++A Sbjct: 753 SFGIAFYPEDGQDIEMLLHNSETAMYQAKRDGRAHYQYFSPEMNVEMLERMHLEQRLRKA 812 Query: 552 ISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWV 611 + ++ L YQP I +GE+ +EAL RW DP +G + P FIP+AEE G IE +G W+ Sbjct: 813 VKQSEFYLEYQPVIDMHSGEVTSVEALVRWQDPDYGVISPQAFIPIAEEAGLIEPLGEWI 872 Query: 612 IAEACRQLAEWRSQNIHIPALSVNLSA---LHFRSNQLPNQVSDAMHAWGIDGHQLTVEI 668 + +A LA+W +Q + + +++N+SA +H R + + + I L +EI Sbjct: 873 LQQALSDLAQWHAQGLMLK-MAINVSARQCIHSRDISFFDILKQTLAKHDIAAENLHIEI 931 Query: 669 TESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCL 728 TESM++E + + ++ ++ +GV + +DDFGTG+S LS L P++ IKIDKSF+D L Sbjct: 932 TESMLIEDKPQCLQTLESIKQLGVDIYLDDFGTGYSALSYLTQCPISVIKIDKSFIDNAL 991 Query: 729 TEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIP 788 L++AI + QSL + +VAEGVET EQ+ LR + C QGY S+PL E+ Sbjct: 992 DNPSDAKLIKAIVMMAQSLEMPLVAEGVETVEQWHFLRNLGCDYAQGYLMSKPLAKAELV 1051 Query: 789 GWMSSVLPLK 798 ++ P + Sbjct: 1052 EFLRHAKPFQ 1061 >UniRef50_B1J9N2 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pseudomonas RepID=B1J9N2_PSEPW Length = 533 Score = 271 bits (694), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 157/478 (32%), Positives = 259/478 (54%), Gaps = 10/478 (2%) Query: 324 RQRDGAPAG-----ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQF 378 RQ DG A +L + TS F+ + + + E S+ +E+L + Sbjct: 48 RQPDGLMASPLVSPLLWFALACTGLTSLFLALINRKQRQLQQRNRELRSSQAQLERLAHY 107 Query: 379 DPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFR 438 D +TGLPNR L D + + V ++ +D + V DSLG+A D L + RF Sbjct: 108 DTITGLPNRVLFQQQLADAILQGDGLAVLMLDIDGFKQVNDSLGHAMGDLLLQQATARFL 167 Query: 439 EKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGIS 498 ++L +CR+ G +FV + L ++ L + +P ++ +T SIG++ Sbjct: 168 QELASADRVCRLGGDEFVFM-LRGTQGQVSHQVAHLLRCLQRPFDLNGSTALVTGSIGLA 226 Query: 499 Y--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQ 556 G++ LL A AM +++G N W+ + M +++RL L L+ A+ N+ Sbjct: 227 RCPQHGEDVGSLLRHADTAMYAAKESGRNAWRPYHTDMTARLQQRLELERNLRRALQANE 286 Query: 557 LKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEAC 616 +L YQP++ +G L G+EAL RW DP+HG V P+ FIPLAE G I +G V+A AC Sbjct: 287 FELWYQPKVDLFSGCLQGVEALLRWRDPVHGLVSPAEFIPLAERTGLIIPLGERVLALAC 346 Query: 617 RQLAEWRSQNIHIPA-LSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMME 675 Q+A WR ++ IP +++N++AL + + ++ A+ G+ L VEITES++ME Sbjct: 347 AQMAAWRDED-RIPGPMAINVAALQIERSDYVSSLAQALECHGLAPSLLEVEITESLLME 405 Query: 676 HDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILA 735 + + + L+ MGV +VDDFGTG+S L+ L +LP+ +KID++F+ + +A Sbjct: 406 SQQQACEVLAQLQAMGVTTAVDDFGTGYSSLAYLRALPIDHLKIDRAFIKDLPDDDDAVA 465 Query: 736 LLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 + AI +G +L + AEG+ET+EQ++ LR C QGY +RP+PA ++ W+++ Sbjct: 466 VARAIIDLGHALGFRITAEGIETQEQYDFLRNAGCDQGQGYLLARPMPAADLARWLAT 523 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 271 bits (694), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 165/474 (34%), Positives = 257/474 (54%), Gaps = 26/474 (5%) Query: 323 IRQRDGAPAGILQIKTSSGAETSAFIERVADISQH-MAALALEQEKSRQHIEQLIQFDPM 381 +R ++G G+ I T DIS+ +A AL +++SR + + D + Sbjct: 290 LRGKEGKVFGVCTIGT--------------DISERKLAENALREQQSR--LNYMAFHDAL 333 Query: 382 TGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRF 437 T LPNR+ ++ + + +A + L+ +D + V DSLG+ D L + R Sbjct: 334 TSLPNRSLFYDRIYHGLARARRSNSRVALMLLDIDRFKIVNDSLGHDAGDILLKAIAMRL 393 Query: 438 REKLKPDQYLCRIEGTQFVLVSLE--NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSI 495 E ++ + R+ G +FV+V LE +DV ++ +A++L +S+P+ I T+SI Sbjct: 394 TEGVRDMDTVARLGGDEFVVV-LEGIHDVDDVIFVANKLLATLSRPLDISGHSISATVSI 452 Query: 496 GISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAIS 553 G+S + G + D LL A AM ++ G N QF++ MN L+L L+ AI Sbjct: 453 GVSIFPEDGADTDELLKNADIAMYKAKEAGKNNCQFYTKGMNATAVNYLLLENDLRRAIE 512 Query: 554 NNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIA 613 NQL L YQPQI +TG++ G+EAL RW P G V P+ FIPLAEE G I IG WV+ Sbjct: 513 QNQLALYYQPQIDLKTGDMTGVEALVRWQHPERGLVSPAHFIPLAEETGLIVPIGEWVLR 572 Query: 614 EACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMM 673 EAC+Q W ++ ++VNLS FR P +V + G++ L +EITES Sbjct: 573 EACKQKKIWLDTGKNVGKVAVNLSPRQFRQKNFPGKVEAILQETGLEAKYLELEITESCA 632 Query: 674 MEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRI 733 MEH E ++ L MG L++DDFGTG+S L+ L P+ ++KID+SF+ + Sbjct: 633 MEHAGETINQLNQLNQMGTFLAIDDFGTGYSSLAYLQRFPIQKLKIDRSFIHDIHDDAND 692 Query: 734 LALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 A+ + I + ++ L VVAEGVET+ Q E LR C +QG+ +++P+ A+++ Sbjct: 693 AAIAKTIIGLAHNMQLRVVAEGVETESQAEWLRAKGCDQVQGFLYAKPMTAKQL 746 >UniRef50_A6FEH9 Sensory box protein n=1 Tax=Moritella sp. PE36 RepID=A6FEH9_9GAMM Length = 627 Score = 271 bits (694), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 152/441 (34%), Positives = 246/441 (55%), Gaps = 12/441 (2%) Query: 363 LEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA----VSPVVYLIGVDHIQDVI 418 L +S++ +L FD +TGL NR L+ ++ A V + I +D + + Sbjct: 182 LTASQSQEEFHRLAFFDSLTGLANRRLLNQTIETQYQLAKTNQVVGALLFIDLDFFKAIN 241 Query: 419 DSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV--SLENDVSNITQ----IAD 472 DSLG+A D L+EV R +E +P+ ++ R+ G +FV++ L + + Q +A+ Sbjct: 242 DSLGHAVGDGILVEVAERLKEIPRPEDFIARLGGDEFVILLPDLSENPMHAEQHANLLAE 301 Query: 473 ELRNVVSKPIMIDDKPFPLTLSIGISYDLGKNR--DYLLSTAHNAMDYIRKNGGNGWQFF 530 +L +S+P + + + SIG++ K++ D LL A AM + NG FF Sbjct: 302 QLIERISQPYLYKGQALYIGASIGVTLFPSKDQHADDLLKQADTAMYQAKSNGRKKVYFF 361 Query: 531 SPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVP 590 M +RL + LK AI+ N+L L YQPQ + G++ G+EAL RWH + Sbjct: 362 DVKMQRKADKRLHIYNCLKSAIAKNELFLHYQPQHMVQNGDIIGVEALVRWHLGGKQQIS 421 Query: 591 PSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQV 650 P+ FIP+AEE I +IG WV+ ACRQ EW+ Q +++P LSVN+S F N + V Sbjct: 422 PAEFIPIAEETDLIIDIGIWVLQAACRQFVEWQLQGVNVPQLSVNVSTRQFHDNNFVDSV 481 Query: 651 SDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLV 710 + G+D QL +EITES+++EH + +++ L+++GV +VDDFG G+S LS L Sbjct: 482 LMVLDETGMDPMQLNLEITESVVIEHAEDAIRKMTDLKNIGVSFAVDDFGVGYSSLSYLK 541 Query: 711 SLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHC 770 LP E+KID+SF+ +A++EA+ ++ + + V AEGVE+++Q E L++ C Sbjct: 542 RLPANELKIDRSFIQGIPYNVSDMAIVEAVLAMAKHMGFNVTAEGVESRQQLEFLQRQQC 601 Query: 771 RVIQGYFFSRPLPAEEIPGWM 791 QG++ S+PL E + ++ Sbjct: 602 SFYQGFYASKPLTGENLALYV 622 >UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BR92_9GAMM Length = 944 Score = 271 bits (694), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 152/462 (32%), Positives = 256/462 (55%), Gaps = 18/462 (3%) Query: 334 LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNY 393 +Q T S +I + D++ E+++ + + L FDP+T LPNR L Sbjct: 486 IQAVTDSAGMARNYIASITDLT--------ERKQVEEKLRYLSDFDPLTNLPNRRLLGYR 537 Query: 394 LDDLVDKAVSP-----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLC 448 +D + + + I +DH +++ DSLG+ + D+ L +V R E ++ + Sbjct: 538 VDQTLSLSRRQPDQQFALLYIDLDHFKNINDSLGHRFGDEILQKVAKRITELVREGDTVS 597 Query: 449 RIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNR 505 R+ G +F+++ E + + +A+ + + +++P+ +D +T S+GI+ + G + Sbjct: 598 RLGGDEFMILMPELHKLEQAANLAERILHNIAQPLE-NDSHLMITPSVGIAVYPNDGDSF 656 Query: 506 DYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQI 565 D LL A A+ + ++ G N +QF++ MN+ ERL + +L++A+ N + +L YQPQ+ Sbjct: 657 DKLLRNADAAVHFAKRQGRNNYQFYTAEMNQRASERLQVEISLRKAVENQEFELFYQPQL 716 Query: 566 FAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ 625 G L G+EAL RW P G VPP+RFIPLAEE G I IG WV+ EACRQ AEW ++ Sbjct: 717 NLRDGSLAGVEALIRWRHPNEGLVPPNRFIPLAEETGLILQIGSWVLVEACRQGAEWAAK 776 Query: 626 NIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQ 685 + +SVN+S FR +L +V A+ G+ L +EITES +M+ + + + Sbjct: 777 STEPFTMSVNVSVRQFRP-ELVEEVRSALLTSGLSPKSLVIEITESTLMQDEEKTLTLLH 835 Query: 686 ILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQ 745 L+++GV LS+DDFGTG+S ++ L + ++KID++F+ A+ AI + Sbjct: 836 ELKELGVQLSLDDFGTGYSSMAYLKRFNLDQLKIDRAFISDLPQNPDDAAITSAIIDVAS 895 Query: 746 SLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 L VAEG+E EQ E L + C QGY++ +P+PA ++ Sbjct: 896 HFGLVTVAEGIEKPEQAEFLASVGCIEGQGYYYEKPIPANDL 937 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 271 bits (693), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 153/444 (34%), Positives = 247/444 (55%), Gaps = 8/444 (1%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVID 419 ++ K+ I++L FD +TGLPNR L ++++ + +A V L+ +D+ + + D Sbjct: 616 DKRKTELQIKKLAYFDSLTGLPNRTLLKDHMELALGQARRLNKFVAVLLLDLDNFKHIND 675 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVV 478 +LG+A D + V R R + + L R G +FVL+ + +D+ N T ++ ++ Sbjct: 676 TLGHATGDLLIRSVAERLRTECRTCDTLARWGGDEFVLLLTDLDDIQNTTSATEKFMALL 735 Query: 479 S-KPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMN 535 + +P + T SIGI+ G++ + LL A AM +KNG NG+ FFS + Sbjct: 736 TERPFATSECDINTTASIGIALYPQDGQDPETLLKRADTAMYEAKKNGRNGYHFFSLQLA 795 Query: 536 EMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFI 595 E + R + L+ A+ +++LVYQPQI + G+EAL RW P G + P+RFI Sbjct: 796 EQAERRHRMEINLRSALKEGEMQLVYQPQIDLGKVRITGMEALLRWQSPEEGTISPARFI 855 Query: 596 PLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMH 655 PLAEE G I +G WV+ +ACRQ A W+ ++VNLSA F L + + Sbjct: 856 PLAEETGLIYPLGEWVLQQACRQGAIWQKTEASPLCVAVNLSAKQFHQPDLAKNIKKILR 915 Query: 656 AWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVT 715 G+ H L +EITES+ +E+ + + L+ +GV S+DDFGTG+S LS L LP+ Sbjct: 916 ETGLSPHLLELEITESVFLENMEAAIEALTELKKLGVQFSIDDFGTGYSSLSYLKKLPID 975 Query: 716 EIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQG 775 IKI + FV T+ A+++A ++ +SL + ++AEGVE +Q L C +QG Sbjct: 976 RIKIAQEFVRDIDTDDGDKAIIKATIAMAKSLGMKLIAEGVENHQQLAFLLLHGCHAMQG 1035 Query: 776 YFFSRPLPAEEIPGWMSSVLPLKI 799 Y+F++P+PA+E+P ++ S K+ Sbjct: 1036 YYFAKPMPAQEVPSFIHSETCFKL 1059 >UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVV8_DESAC Length = 764 Score = 271 bits (693), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 155/439 (35%), Positives = 248/439 (56%), Gaps = 8/439 (1%) Query: 362 ALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDK---AVSPVVYLIGVDHIQDVI 418 +L++++SR + + D +T LPNR N L+ + + V+ IG+D + Sbjct: 327 SLDEKESR--LLYMSNHDLLTNLPNRVLFRNRLNQAIARNHEGNHVVLLFIGLDRFTKIN 384 Query: 419 DSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNV 477 +SLG D L + RF L +Q L R+ G +F ++ + + + A +L Sbjct: 385 ESLGREIGDNTLTQAAERFHNCLAENQILARLGGDEFAVIMEDCRHPQDAAKTAKKLLEQ 444 Query: 478 VSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMN 535 + +PI + LT SIGIS G++ L+S A AM + G + +QFF M Sbjct: 445 LIEPIHVQPNEIYLTASIGISSYPQDGESPKTLMSHADIAMTRAKSEGKDRYQFFEREMT 504 Query: 536 EMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFI 595 + K L L++A++ N+L++ YQPQI ++ ++ G+EAL RW P G + P+ FI Sbjct: 505 QTTKRVFELENDLRKAVARNELRVYYQPQIQLDSQQITGMEALVRWQHPQRGLISPADFI 564 Query: 596 PLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMH 655 PLAEE G I +IG WV+ +AC+Q+A W Q + ++VNLS L FR L V+ + Sbjct: 565 PLAEETGLIVSIGEWVLRQACQQVAMWHDQGLPAVTVAVNLSPLQFRHKALVRNVAKTLK 624 Query: 656 AWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVT 715 GI+ L +E+TESM+M+ + + L ++G GL++DDFGTG+S LS L P+T Sbjct: 625 ETGINPACLELEVTESMIMDSIDKSTATMIELTELGAGLAIDDFGTGYSSLSYLRYFPLT 684 Query: 716 EIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQG 775 ++KIDKSF++R +++ AL ++ ++ SLNL VVAEG+E ++Q + L K C QG Sbjct: 685 KLKIDKSFIERVTSDEHDAALATSVIALAHSLNLKVVAEGIEHEDQVQFLVKRSCHQGQG 744 Query: 776 YFFSRPLPAEEIPGWMSSV 794 + FSRP+PAE++ + + Sbjct: 745 FLFSRPVPAEDMEQLLRQI 763 >UniRef50_Q2S7Q5 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7Q5_HAHCH Length = 832 Score = 271 bits (693), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 158/430 (36%), Positives = 245/430 (56%), Gaps = 23/430 (5%) Query: 379 DPMTGLPNRNNLHNYLDDLVDKAVSPVVYL----IGVDHIQDVIDSLGYAWADQALLEVV 434 D +TGL NR+ +L + +A L I +D +DV DSLG+ D L E+ Sbjct: 385 DSLTGLANRHTFGAFLHRAIAEAARHHFRLGLLYIDIDGFKDVNDSLGHEAGDLVLKEIS 444 Query: 435 NRFREKLKPD--------QY-------LCRIEGTQF-VLVSLENDVSNITQIADELRNVV 478 R L+ + QY + RI G +F ++V+ + +I+ I L + + Sbjct: 445 QRLHNVLRAEDMVADMSAQYEAMEATKMSRIGGDEFAIVVNHLHSPMDISHIVKRLLDAM 504 Query: 479 SKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNE 536 P I+ F L S+GI+ + GK+ LL A AM + ++ G NG+++F MN Sbjct: 505 QAPFQIESHSFLLGASVGIAVYPEDGKDAHELLKCADIAMYHSKRQGRNGFEYFDTKMNH 564 Query: 537 MVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIP 596 M ER + + ++ A+ Q +L YQPQ+ A G + G EAL RW P G V P FIP Sbjct: 565 MAVERHQIISDIRSALQKGQFELYYQPQVSALAGNVMGCEALLRWRHPERGFVSPVEFIP 624 Query: 597 LAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVS-DAMH 655 +AEE G+I IGRWV+ EACRQ EW++Q + +SVN+SA+ F S+ V+ +A+ Sbjct: 625 IAEETGQIIEIGRWVLEEACRQCREWQAQGLDEIRMSVNISAVQFSSSTDIVAVTREALA 684 Query: 656 AWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVT 715 G+ L +EITE+ MM+ D ++ L+++GV +S+DDFGTG+S L+ L LP+ Sbjct: 685 HSGLPPDCLDLEITETAMMQSDKVGVDKLNALKNLGVSISMDDFGTGYSSLASLRDLPID 744 Query: 716 EIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQG 775 ++KIDKSFVD+ + + A+++AI ++ + L++ VVAEGVE + Q + L C +IQG Sbjct: 745 QLKIDKSFVDKINHDSQGRAIIKAILALAKELSIEVVAEGVEERTQLDFLSLHRCDLIQG 804 Query: 776 YFFSRPLPAE 785 Y+ ++PLPA+ Sbjct: 805 YYVAKPLPAD 814 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 271 bits (693), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 156/470 (33%), Positives = 257/470 (54%), Gaps = 12/470 (2%) Query: 328 GAPAGILQIK-TSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPN 386 G G+LQ+ + T + + + D H E +++ + I ++ D +TGLPN Sbjct: 403 GQQCGLLQVAYIRNFPSTLTYQQNLVDTIAHDLGRWYEGKEAEKRIIEMATHDALTGLPN 462 Query: 387 RNNLHNYLDDLV--DKAVSP--VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLK 442 R L + ++ ++ D + V I +DH + + DSLG+ D L V +R + ++ Sbjct: 463 RYLLRDRIEQVLVHDTRLQRQMAVLFIDLDHFKTINDSLGHEIGDLLLKAVADRLKSCVR 522 Query: 443 PDQYLCRIEGTQFVLVSLENDVS---NITQIADELRNVVSKPIMIDDKPFPLTLSIGISY 499 + + R G +F++V N ++ + ++A ++ + + P I + SIGI+ Sbjct: 523 NEDTVARQGGDEFIVVL--NSIAESLDAAKVAQKILDSFALPFHIHKNELHIDGSIGIAV 580 Query: 500 --DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQL 557 D G N + LL + AM + +KNG N +QFF+ +N+ ER +LG L+ A+ N+L Sbjct: 581 FPDDGVNAETLLKNSDVAMYHAKKNGRNNYQFFTDELNKSAYERHILGLDLRYALERNEL 640 Query: 558 KLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACR 617 L YQP + + LYG+EAL RW P + P +FI LAEE G I IG WVI C Sbjct: 641 LLYYQPVMDMPSHNLYGVEALLRWRHPEQKLITPDKFINLAEETGLIIPIGEWVIRTVCL 700 Query: 618 QLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHD 677 Q+ W+ Q ++P +++NLSA FR L +S + G+ + +EITESM++++ Sbjct: 701 QIKAWQEQGFYVPRVAINLSARQFRDKDLIKNISRILSETGVKAKHIALEITESMLIDNI 760 Query: 678 TEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALL 737 ++ + + L MG+ +S+DDFGTG+S LS L P+ +KID+SFV +T+K ++ Sbjct: 761 EKVVETLNRLDAMGLHISIDDFGTGYSSLSYLKQFPIHTLKIDRSFVRDLVTDKNDRTIV 820 Query: 738 EAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 AI ++ SL + V+AEG+E +EQ + L C QGY+FS+P+ EI Sbjct: 821 AAIIAMAHSLEMEVIAEGIEIEEQLDFLVTQKCNHYQGYYFSKPVTVSEI 870 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 271 bits (693), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 154/448 (34%), Positives = 249/448 (55%), Gaps = 8/448 (1%) Query: 354 ISQHMAALA--LEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA----VSPVVY 407 ISQH+ ++ E++ + + I+ L FDP+T LPN+N L++ + A + + Sbjct: 881 ISQHIGIISDISERKVAEERIQFLSNFDPLTNLPNKNLLNDRTKLALATAKRLKTAVTLM 940 Query: 408 LIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNI 467 + +D + + +SLG + DQ + E+ RF ++P+ +CR G +F+L+ D Sbjct: 941 FVDLDRFKFINESLGPSIGDQVVKELAERFVAYMRPEDTVCRQGGDEFILLLPNTDAEGA 1000 Query: 468 TQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGN 525 +A +L ++V++P + LT SIGIS G++ + L +A A+ + G N Sbjct: 1001 AHVAKKLLDIVAQPFNFHGQKIVLTASIGISAYPQDGESFEQLAQSADAALYRAKYEGRN 1060 Query: 526 GWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPL 585 +QFF+ M+E + L+L + L+ AI + + L YQPQ ++T ++ G+EAL RW P Sbjct: 1061 NFQFFARQMHEQAHDILLLESELRSAIEHEEFLLYYQPQYDSKTSKIIGLEALIRWQHPE 1120 Query: 586 HGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQ 645 G V P+ FIP+AEE G I IG WV+ A +QLA W+ + ++VNLS + F + Sbjct: 1121 KGLVSPAVFIPIAEESGLIAEIGDWVLRTAVKQLASWQEAGLGAVPVAVNLSVVQFHQDT 1180 Query: 646 LPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSG 705 L V + +D L +E+TE + ME + L +GV LS+DDFGTG+S Sbjct: 1181 LYGSVCQILRDTKVDPSMLELELTEGIAMEDSERTLNVLNQLNSLGVRLSIDDFGTGYSS 1240 Query: 706 LSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEML 765 LS L + ++KID+SFV + + A++ AI S+ +SL+ +AEGVET EQ L Sbjct: 1241 LSYLKKFKIDKLKIDQSFVRGIGSHPQDAAIITAIISMAKSLSFKTIAEGVETLEQLNFL 1300 Query: 766 RKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 C IQGY+FS+PLP+ E+ +++ Sbjct: 1301 IANSCDEIQGYYFSKPLPSTEVTKLLAN 1328 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 271 bits (692), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 150/437 (34%), Positives = 241/437 (55%), Gaps = 12/437 (2%) Query: 365 QEKSRQHIEQLIQFDPMTGLPNR----NNLHNYLDDLVDKAVSPVVYLIGVDHIQDVIDS 420 Q+ Q I+ + D +T LPNR L L V I +DH +++ DS Sbjct: 794 QKSQEQRIQHIAHHDALTNLPNRLLCMERLILALQQAHRNGRHVAVIFIDLDHFKNINDS 853 Query: 421 LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRN---- 476 LG+ D L+ NR ++ + R+ G +FV++ D+ + QI + +++ Sbjct: 854 LGHHVGDCVLVTAANRLSMGVRDGDTVSRLGGDEFVIIL--ADIEDSHQIEEIMKHRLLP 911 Query: 477 VVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAM 534 ++ +P + SIGIS + G ++D LL A AM ++ G N + F++ + Sbjct: 912 LMRQPYDAGGYELHCSCSIGISIFPEDGLDKDTLLRNADTAMYRAKEVGRNNYHFYTEEL 971 Query: 535 NEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRF 594 N +RL + +L++ I N+L L YQP++ TG+ YG+EAL RW P HG + P F Sbjct: 972 NSRAMQRLSIETSLRKGIERNELLLHYQPKLDLHTGKPYGLEALLRWQHPDHGMISPMEF 1031 Query: 595 IPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAM 654 IP+AEE G I IG+ VI ACRQL+ W S + LS+N+SA+ FR + + + Sbjct: 1032 IPIAEETGLIIPIGKQVIRNACRQLSRWSSVGMSHICLSLNVSAVQFRDRRFVEDLVQLV 1091 Query: 655 HAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPV 714 G+ H++ +E+TE+M+ME + ++ L+D G S+DDFGTG+S L+ L P+ Sbjct: 1092 REEGVSPHRIELELTETMLMEDAVRTIRVMETLKDEGFLFSIDDFGTGYSSLNYLHRFPI 1151 Query: 715 TEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQ 774 +KID+SF+ L LA+++AI +G +L++ V+AEGVE ++++ LR C IQ Sbjct: 1152 DCLKIDRSFIRGMLERPADLAIIKAIIGLGHTLDMQVIAEGVEKEDEYRALRAAGCDGIQ 1211 Query: 775 GYFFSRPLPAEEIPGWM 791 GYF +RPL E++P W+ Sbjct: 1212 GYFVARPLTPEQVPEWL 1228 >UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3H4_9PROT Length = 904 Score = 271 bits (692), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 165/466 (35%), Positives = 255/466 (54%), Gaps = 17/466 (3%) Query: 337 KTSSGAETSAFIERVADISQHMAALAL----EQEKSRQHIEQLIQFDPMTGLPNRNNLHN 392 K S E + RV M A AL E+ ++ I +L FD +TGLPNR L + Sbjct: 430 KDGSECEVEINLSRVDTDQGVMIASALRDISERRRAEGKIAELSFFDHLTGLPNRTLLMD 489 Query: 393 YLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLC 448 + + + + I +D+ + + ++LG+ DQ L ++ R ++ D + Sbjct: 490 RMKLAMTASYRDGKHCALLFIDLDNFKALNETLGHEIGDQLLRDIAPRLVASVREDDTVA 549 Query: 449 RIEGTQFV-----LVSLENDVSN-ITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLG 502 R+ G +F+ L E++ +N + I ++ +S+P ++++ + T SIG + G Sbjct: 550 RLGGDEFLVLLVDLARTESEAANQVEAIGLKIIEALSQPYSLNNQHYVCTPSIGATLFFG 609 Query: 503 KN-RDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVY 561 D LL + AM + GG FF P M E V +R + A L++ + Q L Y Sbjct: 610 HVVADDLLKQSDLAMYKAKAEGGASIHFFDPKMEEAVIKRAKIEADLRQGLIKKQFLLHY 669 Query: 562 QPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAE 621 QPQIF+ G + G+EAL RW P+ G VPPS FIPLAEE G I +G WV+ AC+QLAE Sbjct: 670 QPQIFS-NGRMTGVEALVRWQHPVRGLVPPSDFIPLAEETGLILQLGNWVLEAACKQLAE 728 Query: 622 WRSQ-NIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEI 680 W ++ + ++VN+S F + + + + + G + +L +E+TESM+ E+ +I Sbjct: 729 WATRPELADLTVAVNVSVQQFHQPEFVDHIQEVIRVTGANPERLKLELTESMLAENVQDI 788 Query: 681 FKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAI 740 K++ L+ G+G S+DDFGTG+S LS L LP+ ++KID+SFV LT+ + + I Sbjct: 789 IKKMFALKADGIGFSLDDFGTGYSSLSYLKQLPLDQLKIDQSFVRDVLTDPSDATIAKTI 848 Query: 741 TSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEE 786 ++ QSL L+V+AEGVET+ Q L C QGYFFSRPLP EE Sbjct: 849 VNLAQSLGLSVIAEGVETEAQRNFLETSGCHSCQGYFFSRPLPIEE 894 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 1/103 (0%) Query: 25 AVLINE-NDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKAR 83 A+LI++ + N E++ GY E++IG +I+ L+P+ + AH E+ E R Sbjct: 358 ALLISDAQGAITMANSRVEEVLGYMAEDLIGQSIEALVPKSVNSAHSEHRSAYIEAPDRR 417 Query: 84 VEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDAS 126 + R ++ +KDGS+ LS+V + V + +RD S Sbjct: 418 LMLGGRTIKALRKDGSECEVEINLSRVDTDQGVMIASALRDIS 460 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 271 bits (692), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 151/450 (33%), Positives = 249/450 (55%), Gaps = 14/450 (3%) Query: 352 ADISQHMAALA--LEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA----VSPV 405 DI+Q+ A + E++K+ + I+ L FD +T LPNR + L + A Sbjct: 416 GDITQYAAIFSDITERKKTEERIKNLAYFDVLTALPNRRLFTDRLQIAIANAHRHGQQLA 475 Query: 406 VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEND-V 464 + + +D + + DSLG+ DQ L+E R ++ + R+ G +F ++ E D + Sbjct: 476 IMFLDLDLFKRINDSLGHGVGDQVLVETAARISHCVREGDTVARLGGDEFTVLLPELDHL 535 Query: 465 SNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKN 522 ++ ++A+ + V +P ++DD +T SIGI+ + G + L+ A AM + Sbjct: 536 EDVAKLAERVIAHVKQPFLVDDNELYVTTSIGIAVYPEDGTTVEALIKNADTAMYRAKDL 595 Query: 523 GGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWH 582 G N +Q ++ AMN ERL + ++L+ A++ + +LVYQ ++ +E G + G+EAL RWH Sbjct: 596 GRNSYQLYTAAMNARSFERLTMESSLRHALTREEFRLVYQVKVDSEDGRMSGVEALVRWH 655 Query: 583 DPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFR 642 P G V P FIPLAE +G I +IG WV+ ACRQ W + ++VN+SA F Sbjct: 656 HPEMGLVSPVDFIPLAEAMGVISDIGEWVLRTACRQCKHWMDLGLPPVRIAVNVSAQQFV 715 Query: 643 SNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTG 702 +P V+ A+ G+ L +E+TE+++M+ E+ ++ LR MGV +S+DDFGTG Sbjct: 716 ETDVPEVVARALRETGLPPQYLELELTETVLMQRVDEVVAVLKSLRAMGVRISIDDFGTG 775 Query: 703 FSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILA-----LLEAITSIGQSLNLTVVAEGVE 757 +S LS L +P+ +K+D+SFV+ + + ++ I ++ +L L +AEGVE Sbjct: 776 YSSLSYLKRMPIDALKVDRSFVNDIFDGQSKVTEDGAEIVSTIINLAHNLKLKAIAEGVE 835 Query: 758 TKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 T EQ E LR C +QGY SRP+ E++ Sbjct: 836 TPEQAEFLRSKGCDEVQGYLISRPVSGEDL 865 >UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31M30_SYNE7 Length = 917 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 150/437 (34%), Positives = 255/437 (58%), Gaps = 9/437 (2%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDD---LVDKAVSPV-VYLIGVDHIQDVID 419 EQ+++R+ ++ +D +T LPNR+ + L L +++ V V L+ +D +++ D Sbjct: 473 EQKRNRELLDHQANYDSLTDLPNRSLALDRLRQATALSERSNDTVIVMLLDLDRFKNIND 532 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV--SLENDVSNITQIADELRNV 477 +LG+++ D L E+ R R L + + R+ G +F+++ +++ ++ ++ +++ +L + Sbjct: 533 TLGHSYGDCLLQEIAKRLRYHLPREITISRLGGDEFLIICPAVKENI-HLEKLSQQLLKI 591 Query: 478 VSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMN 535 +S+PI I+ + +T SIG++ + G + L+ A AM ++NGGN +Q F P MN Sbjct: 592 ISQPITIEAEELVITASIGVACYPNDGVTPEVLMRNADTAMYSAKRNGGNDFQLFMPTMN 651 Query: 536 EMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFI 595 R+ L L+ A+ QLK+ YQP I + + G+EALARWHDP G++PP RFI Sbjct: 652 AEAHARIQLETHLRHALEQYQLKVFYQPIISLQDNHVVGLEALARWHDPELGNIPPDRFI 711 Query: 596 PLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMH 655 P+AEE G I +G VI +AC+ +A W+ + + ++VNLS RSN+ + + Sbjct: 712 PIAEETGLIIPLGYRVIEQACQDVAIWQQKYNYPFWVAVNLSPRQLRSNRFTQITAKILQ 771 Query: 656 AWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVT 715 + L +E+TE M++++ + I + + L G+ L++DDFGTG+S LS L P Sbjct: 772 RHNFRPNYLKLEVTEQMLLDNTSTIAQMLDTLHRKGIALALDDFGTGYSALSYLRRYPFQ 831 Query: 716 EIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQG 775 +K+D+SF+ AL++ I ++ L + VAEGVET EQ E L+ I C QG Sbjct: 832 SLKVDQSFLRDIPHSTESCALVKTIVAMAHGLGMQAVAEGVETAEQVEFLKAIGCEYGQG 891 Query: 776 YFFSRPLPAEEIPGWMS 792 Y+FSRPLPA EI +++ Sbjct: 892 YWFSRPLPAVEIDSFLA 908 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 37/247 (14%) Query: 18 LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNR 77 +E N G ++++E V+F N AE+++ E+ G + + P L Sbjct: 264 IESNPNGILVLDEQGAVLFANHVAEQVFDQSLSELQGKYLGL--PLTL------------ 309 Query: 78 EGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQ 137 ++ +L L + DGS + ++ + + YLAL+ D + +++ + Sbjct: 310 --------NVTVQLDLVQPDGSLRYVEVSIVPIPWQQSKAYLALLTDITSLQQTQQRLKL 361 Query: 138 LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL---LNIPEFPADN 194 L A ++ +++ E I N AF M GY E G P L L P F D Sbjct: 362 LQEATENSPASILITSAEGIIEYVNPAFELMTGYGADEVIGKNPRFLKSGLMSPSFYQD- 420 Query: 195 RIRLQQLLWKTARD----QDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITE 250 LW+T + E +TGE W + SISPV D+ + + V DITE Sbjct: 421 -------LWETITAGETWRGELYNRRKTGELFWDRTSISPVKDLAGQIIHFVAVKEDITE 473 Query: 251 ERQIRQL 257 +++ R+L Sbjct: 474 QKRNREL 480 >UniRef50_Q2BQB2 Sensory box protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQB2_9GAMM Length = 677 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 153/442 (34%), Positives = 254/442 (57%), Gaps = 7/442 (1%) Query: 351 VADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVV 406 V + Q ++ E E+ + + Q+ + D +TGL NR L++++ + V Sbjct: 217 VDQLQQEISKRTSELEQQKNSLRQIAEHDSLTGLANREAFLKSLNEVIIHCSTNKRRAAV 276 Query: 407 YLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLENDVS 465 + I +D + + DS+G++ D L+E+ +RF L+ L RI G +F V++ + Sbjct: 277 FFIDLDKFKQINDSMGHSAGDAVLIEMAHRFTSTLRKSDSLARIGGDEFTVIIDPLYESK 336 Query: 466 NITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNG 523 + ++A +L + +P +D+ L SIGI+ + G L+ A +AM +K G Sbjct: 337 DAAELAKKLIASLEEPYEYEDQTLYLNTSIGIAVYPEDGTTPQELMKNADSAMYQAKKAG 396 Query: 524 GNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHD 583 GN + F++ MN+ ++ L + L+ AI +QL + YQPQ +T +L G+EALARW Sbjct: 397 GNTFHFYNRLMNQDTLAKIQLESELRSAIQQDQLTVYYQPQFDLKTRKLVGVEALARWIH 456 Query: 584 PLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRS 643 P G +PP FIPLAEE G I +G ++ +AC+Q+A+W + AL+VNLSA + Sbjct: 457 PEKGLIPPCTFIPLAEEKGLIHQVGSIILTKACQQMAQWNGEREAQIALAVNLSAKQLNT 516 Query: 644 NQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGF 703 +L +SD +H G++ L +EITES ++ + +++ L+ +G+ L++DDFGTG+ Sbjct: 517 PELAGSISDILHTTGLNAQHLELEITESCVLSDPEDAIHKLEQLKALGIRLAMDDFGTGY 576 Query: 704 SGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFE 763 S L+ L LP+ ++KIDKSFVD A+ +A+ ++G SLNLTV+AEG+E + Q Sbjct: 577 SSLAYLKKLPLDKLKIDKSFVDGLEINPEDAAICQAVIALGHSLNLTVIAEGLEHEVQAT 636 Query: 764 MLRKIHCRVIQGYFFSRPLPAE 785 +L + C QGYFF++P+ AE Sbjct: 637 ILAEQGCDQAQGYFFAKPISAE 658 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 207/714 (28%), Positives = 355/714 (49%), Gaps = 66/714 (9%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 L + +VE A + +QL +D V V+D + + NRA +M G E G + Sbjct: 322 LAKARAVEQALLDARQQLNDIIDFFPDAVFVIDRNKRVTIWNRAIEKMSGVPKEEMLG-K 380 Query: 181 PDTLLNIPEFPADNRIRLQQLL----------WKTAR------DQDEFLLLTRTGEKIWI 224 D +IP F R +L LL + R D + F G+ ++ Sbjct: 381 GDHEYSIP-FYGQRRTQLLDLLDLDDAELAAKYSNIRRVGEVLDAETFCPALHDGKGAYV 439 Query: 225 KASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIES 284 A+ P+Y+ + DI++ +Q + + +S ++ + + Sbjct: 440 WATGVPLYNAAGERIGAIEAIRDISDRKQSELFLKKLTHGIENSA-----SAVVITDTQG 494 Query: 285 VL---NESHVSL--FALRNGM---PIHWASSSHGAE--------IQNAQSWSATI--RQR 326 V+ N+ + L F+L + P S + E I + + W + R++ Sbjct: 495 VIEYVNKKFIQLTGFSLEEAVGKNPRILKSEATPPEVFVDLWKTILSGREWRGELLNRRK 554 Query: 327 DG----APAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMT 382 +G + I ++ SG E + FI V DI+ E++ + IE L FDP+T Sbjct: 555 NGEVYWSITSISPLRNDSG-EITHFIANVEDIN--------ERKNAEATIEHLAYFDPLT 605 Query: 383 GLPNRNNLHNYLDDLVDKA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFR 438 LPNR L + L+ + ++ + + + +D + V DS+G+ D L E+ RF Sbjct: 606 DLPNRRMLQDRLELALRRSRRHGSNVALMYLDLDSFKHVNDSMGHPAGDLLLKEMAGRFS 665 Query: 439 EKLKPDQYLCRIEGTQFVLV--SLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIG 496 ++ D +CR+ G +F L+ + D ++ IA +L V++P+ +D + +T SIG Sbjct: 666 GVVRDDDVVCRLGGDEFALILHDIHQD-QDVVPIAQKLIEAVAQPVPLDGREVVVTASIG 724 Query: 497 ISY---DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAIS 553 I+ D G ++ L A A+ + ++ G N ++F+ +N + R+ L L+ A Sbjct: 725 IALFPRDGGDVKN-LEKHADIALYHAKEEGKNTFRFYLEELNSTISTRIALEQGLRYAKE 783 Query: 554 NNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIA 613 +L+L YQP++ +G++ G+EAL RWH P G V P RFIPLAE+ I IG WV+ Sbjct: 784 RQELELHYQPKVCVASGKVSGVEALLRWHSPDFGLVSPIRFIPLAEQTRLIIPIGEWVLR 843 Query: 614 EACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMM 673 AC Q +WR Q + + ++VNLSA+ +S L +V+ + GI L +E+TES + Sbjct: 844 TACLQQVQWREQGLLL-NMAVNLSAIQLKSPGLVERVAAIIDETGIQPEHLELELTESAL 902 Query: 674 MEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRI 733 + + E+ + ++ LR +G +S+DDFGTG+S LS L S PVT +KID+SFV Sbjct: 903 VNNPDEVVQLLERLRTLGCSISIDDFGTGYSSLSYLKSFPVTILKIDRSFVRDLAHNSGD 962 Query: 734 LALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 A+ ++ + +L++ VAEGVE++EQ +L++I C IQG+ +SRP+ A+++ Sbjct: 963 RAIARSVVDLANNLDMKTVAEGVESEEQLTILQQIGCTYIQGFIYSRPVQADQV 1016 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 61/261 (23%), Positives = 101/261 (38%), Gaps = 38/261 (14%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIG-NNIDMLIP---------- 62 FFP +I+ N V +N A EK+ G +EE++G + + IP Sbjct: 345 FFPD------AVFVIDRNKRVTIWNRAIEKMSGVPKEEMLGKGDHEYSIPFYGQRRTQLL 398 Query: 63 ----RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYY 118 D +Y R G E L K G+ +W +A ++ Sbjct: 399 DLLDLDDAELAAKYSNIRRVGEVLDAETFCPALHDGK--GAYVWATGVPLYNAAGERIGA 456 Query: 119 LALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 + +RD S + ++L +++ V++ D + I N+ F ++ G+ + EA G Sbjct: 457 IEAIRDISDRKQSELFLKKLTHGIENSASAVVITDTQGVIEYVNKKFIQLTGFSLEEAVG 516 Query: 179 MQPDTL---LNIPEFPADNRIRLQQLLWKT---ARD-QDEFLLLTRTGEKIWIKASISPV 231 P L PE D LWKT R+ + E L + GE W SISP+ Sbjct: 517 KNPRILKSEATPPEVFVD--------LWKTILSGREWRGELLNRRKNGEVYWSITSISPL 568 Query: 232 YDVLAHLQNLVMTFSDITEER 252 + + + + DI E + Sbjct: 569 RNDSGEITHFIANVEDINERK 589 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 161/432 (37%), Positives = 241/432 (55%), Gaps = 13/432 (3%) Query: 368 SRQHIEQLIQF----DPMTGLPNRNNLHNYLD-DLVDKAVSPV---VYLIGVDHIQDVID 419 +++ +E +I++ D +T LPNR L L + P V + +D + V D Sbjct: 423 AQKRVESIIRYQACHDALTHLPNRLLFDEQLALALANSKQQPELLGVAFLDLDRFKVVND 482 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVV 478 +LG+ DQ L +V R ++ L+ + R G +F L+ IT+IA + + + Sbjct: 483 TLGHGIGDQLLQQVATRLKQCLRNCDTIARWGGDEFTLLFPHLTSTDEITKIAHRILDKL 542 Query: 479 SKPIMIDDKPFPLTLSIGIS---YDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMN 535 S P +ID++ +T S+GI+ YD ++ LL A AM +K G N +Q F+ M+ Sbjct: 543 SIPFVIDNQELYVTASLGIALCPYD-AEDAQTLLKHADAAMYRAKKQGRNNFQVFAEEMH 601 Query: 536 EMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFI 595 +L L A L+ A+ + L YQPQ+ TG++ G+EAL RW P G VPP +FI Sbjct: 602 REALNQLTLEADLRRALIKEEFLLYYQPQVEISTGKIVGLEALIRWQHPTLGFVPPDQFI 661 Query: 596 PLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMH 655 PLAEEIG I IG+WV+ AC Q W+++ + ++VNLSA F +QL N + + Sbjct: 662 PLAEEIGLIAPIGQWVLQTACIQHQSWQAEGLPPVRIAVNLSARQFHQSQLINIILQTLE 721 Query: 656 AWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVT 715 ID L +EITES M+ + +Q LR+MG+ +++DDFGTG+S L+ L P+ Sbjct: 722 TTEIDPQYLELEITESAAMQDVEFTIQTLQELREMGLHITIDDFGTGYSSLNVLKHFPLN 781 Query: 716 EIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQG 775 +KID+SFV + R A+ + I ++ Q L L VVAEGVET +Q LR IHC + QG Sbjct: 782 TLKIDRSFVQDIVENSRDAAIAQTIVALSQGLKLKVVAEGVETPQQLSFLRSIHCDLAQG 841 Query: 776 YFFSRPLPAEEI 787 Y+F P+PA EI Sbjct: 842 YYFCPPVPAIEI 853 >UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Shewanella RepID=A6WKV6_SHEB8 Length = 921 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 158/458 (34%), Positives = 253/458 (55%), Gaps = 10/458 (2%) Query: 345 SAFIERVADISQHMAALA--LEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA- 401 S + V D+ +A A Q+++ + L FDP+T LPNR L V +A Sbjct: 464 STIYDEVGDVRYFVAVFADISAQKENEAQLTHLAYFDPLTHLPNRMKFMMQLKQEVRQAK 523 Query: 402 ---VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFV-L 457 + +I VD + + DS G++ D+ L+E+ R R ++ L RI G +FV L Sbjct: 524 RLNLQLATVMIDVDLFKHINDSFGHSIGDEMLVELAKRLRSQVGDQDVLSRIGGDEFVAL 583 Query: 458 VSLENDVSNITQIADELRNVVSKPIMIDDKP-FPLTLSIGISY--DLGKNRDYLLSTAHN 514 +S ++ + T ++LR V +P ++ LT S+G+S + G + D LL A Sbjct: 584 ISGIDNNEDATVAINQLRQVFEQPFIVSTGDHLRLTASMGVSLYPNDGTDADTLLRNADA 643 Query: 515 AMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYG 574 AM + +G N + F++ ++ + E L L +AL AI N L L+YQP++ + + G Sbjct: 644 AMYRAKNDGRNNYAFYTESLTQQSFEHLKLQSALYGAIEQNALYLMYQPKLDLVSRKTVG 703 Query: 575 IEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSV 634 EAL RWHDP G + P+ FIP+AE+IG I IG WV+ ACRQ W + H ++V Sbjct: 704 FEALLRWHDPQLGLISPAVFIPVAEKIGLIHEIGLWVLETACRQGMRWLREGKHFGRIAV 763 Query: 635 NLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGL 694 N++ + + + V + G+ L +E+TES+MM++ + ++ L D+G+ L Sbjct: 764 NVAGQQLQRSSFVDDVKRVLAETGLPAKHLELEVTESVMMQNPDLAIRDLKRLGDLGIEL 823 Query: 695 SVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAE 754 SVDDFGTG+S L+ L LP+ ++KID+SFV + A+ +A+ ++G +L L ++AE Sbjct: 824 SVDDFGTGYSSLNYLKKLPIHKLKIDQSFVRDIPFDTNNTAIAKAVIALGHALKLDIIAE 883 Query: 755 GVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 GVETKEQ + L++ C QGY FSRP E++ ++S Sbjct: 884 GVETKEQADFLQQNQCDQAQGYLFSRPQLPEDLDAFLS 921 >UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FU0_DECAR Length = 1006 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 154/434 (35%), Positives = 240/434 (55%), Gaps = 7/434 (1%) Query: 365 QEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA----VSPVVYLIGVDHIQDVIDS 420 + + + + + D +TGL NR +L LD + A V + +D + + D+ Sbjct: 568 ERAAEERLHHMAHHDVLTGLLNRLSLKGRLDQALAAARRDGSRVAVLFVDLDRFKVINDT 627 Query: 421 LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFV-LVSLENDVSNITQIADELRNVVS 479 LG+ D+ L+EV NR R+ ++ + R+ G +FV ++S S + +A++L V Sbjct: 628 LGHHVGDELLIEVANRLRDGVRDSDVVARVGGDEFVIMLSGVEHTSAVAMVAEKLVFSVG 687 Query: 480 KPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEM 537 + I T SIGI+ G++ D L+ A AM + + G N +QFF MNE Sbjct: 688 QSYQIGGYDLYSTPSIGIAIYPTDGEDGDILMKNADAAMYHAKMAGRNNFQFFDAKMNEA 747 Query: 538 VKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPL 597 ERL AL+ A++N + L YQP I + + +EAL RW+ P G + P +FI + Sbjct: 748 ALERLNTEHALRRALANQEFCLYYQPVIDLASNRVASLEALIRWNHPEKGLLLPGKFIGI 807 Query: 598 AEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAW 657 AEE G I+ +G WV+ ACRQLA++ + I + VN+SA+ R+ LP + A+ Sbjct: 808 AEETGLIQPLGEWVLWAACRQLADFAAAGISGIKMGVNISAIQMRNGNLPLLARGVIEAY 867 Query: 658 GIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEI 717 ID L EITES+ ME TE + + +L MGV +++DDFGTG+S LS L P+ + Sbjct: 868 DIDPRNLIFEITESVAMEQPTETVRILDLLNAMGVSVAIDDFGTGYSSLSYLRMFPINHL 927 Query: 718 KIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYF 777 K+D+SFV++ E + +A + SL L VVAEGVET+ Q + LR C ++QG+ Sbjct: 928 KLDRSFVEQIGEEIDGCVICDATIGLAHSLELKVVAEGVETQAQLDYLRSRGCDMVQGFL 987 Query: 778 FSRPLPAEEIPGWM 791 FSRP+PA+E+ ++ Sbjct: 988 FSRPVPADEVLAFI 1001 >UniRef50_A3JAE8 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Marinobacter sp. ELB17 RepID=A3JAE8_9ALTE Length = 828 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 163/447 (36%), Positives = 242/447 (54%), Gaps = 19/447 (4%) Query: 366 EKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSL 421 EKSR +E+L D +TGLPNR H L ++ A V + +D+ + V D+L Sbjct: 368 EKSRVRVERLAYHDSLTGLPNRFRAHETLRCMISLAHRESRRMAVLFLDLDNFKRVNDTL 427 Query: 422 GYAWADQALLEVVNRFREKLKPDQY------------LCRIEGTQFV-LVSLENDVSNIT 468 G+ DQ L+E+ R + L+ + L R+ G +FV L+S + + Sbjct: 428 GHQVGDQLLMEMAIRLQVVLRAEDVIHQEVSQNTLDVLARLGGDEFVVLLSNVSSSRDAA 487 Query: 469 QIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNG 526 ++A + +++ P ++ SIGIS G + D L+ A AM + G N Sbjct: 488 KVASRILDIMKLPFYFNENEIYSGCSIGISLFPSDGSDVDDLIKRADAAMYQAKSQGRNN 547 Query: 527 WQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLH 586 +QF+S + N E + L L+ A+ NN+L L YQP + A TG++ G+EAL RW+DPL Sbjct: 548 FQFYSASYNLAALEHISLEGRLRRALKNNELVLYYQPLVQARTGKIVGLEALLRWNDPLD 607 Query: 587 GHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQL 646 G +PP RFIP+AEE G I +G WV+ EA RQL+ W + +SVN+SA+ + L Sbjct: 608 GIIPPDRFIPVAEESGLILPLGEWVLREAGRQLSTWHAAGFTDACVSVNVSAIQLQRQDL 667 Query: 647 PNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGL 706 V + G+ QL +EITE+ +M E+ + +R GV +S+DDFGTG+S L Sbjct: 668 VTIVDQVLKDNGLRPWQLELEITETALMRIRPEVIGDLNAMRRKGVTISLDDFGTGYSSL 727 Query: 707 SRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLR 766 S L LP+ ++KIDKSFV L + + A++ A+ I +SL L AEGVET EQ L Sbjct: 728 SLLQELPIGKLKIDKSFVRDMLVDPKDAAIVSAVLFIAKSLGLQSTAEGVETPEQAARLA 787 Query: 767 KIHCRVIQGYFFSRPLPAEEIPGWMSS 793 + C +QGY RPLP E+ ++ S Sbjct: 788 EEGCDQLQGYLLCRPLPVAEMTEFLKS 814 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 157/445 (35%), Positives = 240/445 (53%), Gaps = 25/445 (5%) Query: 371 HIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWA 426 + +L +DP+T LPNR L + L ++ + + I +D+ + + D+ G+ Sbjct: 472 QLHKLAFYDPLTQLPNRRLLLDRLGHVLAGSTRSRNQGAIMFIDLDNFKALNDTQGHDVG 531 Query: 427 DQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDD 486 D+ L EV R + ++ + R+ G +FV+ + D++ + + ++ V K + D Sbjct: 532 DRLLAEVAQRLKSSVRQCDTVARLGGDEFVV--MVQDLAADSMVVAQVEAVAGKILAALD 589 Query: 487 KPFPL----------------TLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQ 528 P+ L T SIGI+ N D LL A AM + +G N + Sbjct: 590 CPYRLVFDAELGRRNALNYHCTASIGITLFGAHSTNVDELLKQADLAMYQAKDSGRNAIR 649 Query: 529 FFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGH 588 FF P M + R+ L A L+EA+ Q +L YQPQ+ E+ L G EAL RWH G Sbjct: 650 FFDPEMQAAITSRVALEADLREAVEAGQFQLYYQPQVVGESHRLTGAEALLRWHHSRRGM 709 Query: 589 VPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ-NIHIPALSVNLSALHFRSNQLP 647 VPPS FIPLAEE G I +G+WV+ AC QLA W SQ + ++VN+SA R Sbjct: 710 VPPSEFIPLAEETGLILPLGQWVLETACAQLATWASQPEMAQLTVAVNVSAHQIRQTDFV 769 Query: 648 NQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLS 707 +QV + G + +L +E+TES+++ + +I ++ +L+ GVG S+DDFGTG+S LS Sbjct: 770 DQVLAVLADAGANPQRLKLELTESLLVSNVEDIIAKMTLLKSRGVGFSLDDFGTGYSSLS 829 Query: 708 RLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRK 767 L LP+ ++KID+SFV+ LT+ A+ + I ++ +SL L V+AEGVET+EQ L + Sbjct: 830 YLKRLPLDQLKIDQSFVNEVLTDANDAAIAKMIVALAESLGLAVIAEGVETEEQRNFLAE 889 Query: 768 IHCRVIQGYFFSRPLPAEEIPGWMS 792 C QGY FS+PLP W+ Sbjct: 890 SGCHAYQGYLFSKPLPLAGFEQWIG 914 >UniRef50_B3E5T4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter lovleyi SZ RepID=B3E5T4_GEOLS Length = 581 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 152/413 (36%), Positives = 237/413 (57%), Gaps = 10/413 (2%) Query: 379 DPMTGLPNRNNLHNYLDDLVDKAVSP---VVYLIGVDHIQDVIDSLGYAWADQALLEVVN 435 DP+TGLP RN+L V K P V L+ +D+++ V +LG+A D+ L+E N Sbjct: 157 DPLTGLPTRNHLQELFTRAVKKNDFPGSLFVMLLDLDNLKSVNKTLGHACGDRVLVETAN 216 Query: 436 RFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSI 495 R E + + R+ QF+++ + D + +R +++ P + +T I Sbjct: 217 RLLELQTEQRVVGRLGADQFIIMVV--DCHEVHGCITAVRQLLAIPYTTGPEELFVTGCI 274 Query: 496 GIS---YDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAI 552 GIS +D G++ D LL A+ A+ ++ G N + F+S + E ++ER+V + L A+ Sbjct: 275 GISVFPHD-GESLDRLLQNANAALSQAKQLGTNKYAFYSRDLGERLRERMVRESGLHRAL 333 Query: 553 SNNQLKLVYQPQIFAETGELYGIEALARWHDPLHG-HVPPSRFIPLAEEIGEIENIGRWV 611 ++ L YQP+I +TG + G+EAL RW G V PS FIP+ EE G I +G WV Sbjct: 334 ERDEFFLEYQPKIAVQTGMVCGMEALLRWQPTTQGSQVSPSEFIPILEETGMIVEVGNWV 393 Query: 612 IAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITES 671 + ACRQ W+ Q + LSVN+SA+ F + LP ++ + GI L +E+TES Sbjct: 394 LETACRQHLLWQQQGMPPLTLSVNISAVQFHAGNLPETIAALIQQTGIAPDCLCLELTES 453 Query: 672 MMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEK 731 ++M+ + + LR+ G+ LS+DDFGTG+S L+ L +P+TE+KID+SFV + Sbjct: 454 IVMQDIEQTVATLHRLREQGIKLSIDDFGTGYSSLNYLQRMPLTELKIDRSFVMNLPQDT 513 Query: 732 RILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPA 784 +A+++++ ++ +SLNLTVVAEGVET +Q L C +QGY FSRPL A Sbjct: 514 SAIAIVDSVLTLSKSLNLTVVAEGVETPQQAAFLTARQCHQLQGYLFSRPLGA 566 >UniRef50_C1D398 Putative diguanylate cyclase with PAS/PAC and GAF n=1 Tax=Deinococcus deserti VCD115 RepID=C1D398_DEIDV Length = 960 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 161/441 (36%), Positives = 242/441 (54%), Gaps = 7/441 (1%) Query: 350 RVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----V 405 RV D ++H+ A+A+E + ++ D +TGL NR L +D A Sbjct: 515 RVLDKARHLTAVAVEHHHLTEQLKYQALHDALTGLANRQLFEESLQRALDAAQHVGGELA 574 Query: 406 VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVS 465 V I VD+ + V DSLG+ DQ L E+ +R + ++ + RI G +F ++ S Sbjct: 575 VLFIDVDNFKSVNDSLGHEAGDQVLREIASRLKGCVQHGDTVARISGDEFTVILPFASES 634 Query: 466 NITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNG 523 + ++A ++ V+S P+ + D+ ++ SIGI+ + G + + L TA AM Y K+ Sbjct: 635 DALEVARQITEVLSDPMHVVDRQIKVSASIGITLTPEGGSDPEMLHRTADLAM-YHAKSR 693 Query: 524 GNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHD 583 + F MN ER L + L++A +N +L YQP I G+L G+EAL RW Sbjct: 694 KMSFAVFRSEMNRRAYERFQLTSFLRQAAEHNDFELHYQPLIRLFDGQLTGVEALVRWQH 753 Query: 584 PLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRS 643 G V P RFIPLAEE G IE+IG WV+ EACRQ W++Q ++VN+SAL F Sbjct: 754 EELGAVSPERFIPLAEETGLIESIGAWVLKEACRQGVLWQAQGHSQLRVAVNVSALQFER 813 Query: 644 NQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGF 703 V+ + G QL +E+TE ++M E R++ LRD+GV +SVDDFGTG+ Sbjct: 814 RNFVETVARCLEETGFPAEQLELELTERVIMRQVEESVWRMRQLRDLGVWISVDDFGTGY 873 Query: 704 SGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFE 763 S LS L LP+ +KID+SFV +++AI S+ +SL+L +AEG+ET E+ Sbjct: 874 SSLSYLPRLPINILKIDRSFVTGLSETSPTFPVVQAILSLARSLHLEAIAEGIETNEELS 933 Query: 764 MLRKIHCRVIQGYFFSRPLPA 784 +L+ + C + QG+FF R PA Sbjct: 934 VLKHLGCDLGQGHFFGRAKPA 954 >UniRef50_Q2BMC4 Hybrid signal transduction histidine kinase and diguanylatecyclase/phosphodiesterase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMC4_9GAMM Length = 580 Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 152/435 (34%), Positives = 258/435 (59%), Gaps = 24/435 (5%) Query: 369 RQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV---SPVVYL-IGVDHIQDVIDSLGYA 424 + + +QL +DP+TGL NR + L +++A S V L + +D +DV +S G Sbjct: 137 KAYQDQLAYYDPLTGLANRFLFKDRLQWAMEQAETQNSHVALLHLTLDKFRDVNESYGPR 196 Query: 425 WADQALLEVVNRFREKLKPD------------QYLCRIEGTQFVLVSLENDVSNITQIAD 472 + D+ L V +R + LK + + R G +F ++ N + + + IA Sbjct: 197 FGDRILQVVADRIIDYLKHSDVIRRSGDEDVWRTIARTGGDEFSVLLASNRIDDASYIAA 256 Query: 473 ELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFF 530 L + +++P ++D++ LTLS GIS+ + + L+ A NA Y ++ GGN ++F+ Sbjct: 257 GLVDTINEPFLLDNQDCYLTLSAGISFYPSDASSINELVQHASNAAQYAKQQGGNRYRFY 316 Query: 531 SPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVP 590 S N ++KE + L L++AI +Q +LV+QPQ+ +ET L G+EAL RW+ P G++P Sbjct: 317 SEEANRLLKENIYLQGQLRKAIKADQFELVFQPQVDSETHVLKGVEALLRWNHPERGYIP 376 Query: 591 PSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQV 650 P+ FIPLAE+ G I IG W+ + C+Q AEWR Q +S NLS+L S L + Sbjct: 377 PAHFIPLAEDAGLITAIGEWIFKQVCKQAAEWRDQFGVDITVSTNLSSLQLNSPNLIASM 436 Query: 651 SDAMHAWGIDGHQLTVEITESMMM---EHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLS 707 +++ G++ + +EITES+ M E++ I K+I D+G+ L++DDFGTG+S LS Sbjct: 437 KESIAESGVNPESVVIEITESIAMADIENNLLILKQIT---DLGLALAIDDFGTGYSSLS 493 Query: 708 RLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRK 767 + +PV+E+KIDK FVD +++ +A+++AI ++ + L+ +VAEG+E + Q + L++ Sbjct: 494 YIKHMPVSEVKIDKIFVDGIPSDRGDVAIIDAIITMAKELDFRLVAEGIENQTQADYLKE 553 Query: 768 IHCRVIQGYFFSRPL 782 C V+QG++F +P+ Sbjct: 554 KGCDVLQGFYFYKPI 568 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 154/435 (35%), Positives = 239/435 (54%), Gaps = 8/435 (1%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLH---NYLDDLVDKAVSPV-VYLIGVDHIQDVID 419 E+ + + IE+L FD +TGLPNR L+ Y L ++ + V + +DH +D+ D Sbjct: 711 EKRLTEERIEKLEHFDHLTGLPNRTQLNERFKYALSLAQRSGEQMTVMFLDLDHFKDIND 770 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVS 479 +LG++ DQ L++V R +E L+ + + R G +F+L+ D + +A +L VS Sbjct: 771 TLGHSIGDQLLMDVAKRLKETLRDEDTVSRQGGDEFILILPGTDENGAAHVAAKLMEAVS 830 Query: 480 KPIMIDDKPFPLTLSIGIS---YDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNE 536 + + T SIGI+ +D G+N + L A AM ++ +G NG+ FF+ M Sbjct: 831 QAFQFEQHELVATCSIGIAIYPHD-GENFETLSKNADTAMYRVKHDGRNGFCFFTSEMQA 889 Query: 537 MVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIP 596 L LG AL+ A++ QL L YQPQI + G + G EAL RW P G + P+ FIP Sbjct: 890 HSARTLQLGNALRHALTRGQLHLHYQPQISTQDGHVVGAEALLRWQHPELGSISPAEFIP 949 Query: 597 LAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHA 656 +AE+ G+I IG WV+ A +QL +W + ++VNLSA FR + L V+ + Sbjct: 950 IAEDNGQIIPIGEWVLRTAIKQLKDWMDSGLPPMIMAVNLSAAQFRQSNLMELVTSILDE 1009 Query: 657 WGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTE 716 + L +E+TE++ M+ + L G+ +S+DDFGTG+S LS L V + Sbjct: 1010 SKVPHRYLELELTEAVAMDDPQLAIGVMDKLHTGGIKMSIDDFGTGYSSLSYLKRFKVYK 1069 Query: 717 IKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGY 776 +KID+SFV + A++ AI ++ SL + +AEGVET Q LR C +QGY Sbjct: 1070 LKIDQSFVHDITDDPDDKAIVAAIINMASSLGMQTIAEGVETAGQLSFLRLQGCNEVQGY 1129 Query: 777 FFSRPLPAEEIPGWM 791 +FS+PLPAE+ ++ Sbjct: 1130 YFSKPLPAEQFVSYL 1144 >UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7K0U5_VIBSE Length = 815 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 147/427 (34%), Positives = 252/427 (59%), Gaps = 10/427 (2%) Query: 370 QHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA----VSPVVYLIGVDHIQDVIDSLGYAW 425 + ++++ +DP+T LPNR +L + L+ ++ + + +DH + + DS+G+ Sbjct: 388 EKLQRMAFYDPLTNLPNRTHLLSLLEQHIETGHKNQQTFATLFLDIDHFKHINDSMGHFC 447 Query: 426 ADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV--SLENDVSNITQIADELRNVVSKPI- 482 DQ L ++ R ++ L + ++ RI G +FV++ + +DV+ + + D L +V +P Sbjct: 448 GDQLLSKLAIRLQDILHLNAHVARIGGDEFVIILPDVHSDVALLETVGDIL-SVFQQPFD 506 Query: 483 MIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKE 540 + + ++ SIGI+ G++ + LL A AM +KNG NG+ F+SP + + Sbjct: 507 LANHDSLRVSTSIGIALYPRDGQDSETLLKNADTAMYLAKKNGRNGYAFYSPDLTDKSVS 566 Query: 541 RLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEE 600 + + +AL +AI QL+L +QPQ E + G+E L RW P G VPP+ FIP+AE+ Sbjct: 567 HVRIQSALHQAIEKQQLRLEFQPQYNLEQHAIVGVETLLRWQHPEFGLVPPADFIPIAEK 626 Query: 601 IGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGID 660 G I++IG WV+ AC+Q W Q + ++VN+SAL + + ++SD ++ G Sbjct: 627 TGLIQSIGEWVLLHACQQGNAWLEQGVEFGRIAVNVSALQLQQSNFIQRLSDILNQTGFP 686 Query: 661 GHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKID 720 +L +EITES ++ + + LR++G+ +S+DDFGTG+S LS L LP+ ++KID Sbjct: 687 AQRLDLEITESFLLIDPQQAIASLNQLRELGIEISLDDFGTGYSSLSYLKGLPINKLKID 746 Query: 721 KSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSR 780 +SFV + A++ AI ++G++L+L VVAEG+ET+EQ + L + C QGY FSR Sbjct: 747 RSFVSDVPSNSDSNAIVNAIIAMGKTLSLKVVAEGIETQEQADYLFEKGCVYGQGYLFSR 806 Query: 781 PLPAEEI 787 P+ AE++ Sbjct: 807 PVSAEKL 813 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 10/119 (8%) Query: 24 GAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKAR 83 G V+ + N ++ N A ++ GY+ EEVIG N PR LR H + + + + Sbjct: 281 GMVITDRNANIIDVNTAFTQITGYRSEEVIGKN-----PRILRSGHHDQGFYKQLWHQLE 335 Query: 84 VEGMSR-ELQLEKKDGSKIWTRFALSKVSAEGK---VYYLALVRDASVEMAQKEQTRQL 138 +G + E KKDGS I+ + A + K + Y+ + D SV A +E+ +++ Sbjct: 336 TKGQWKGEFINRKKDGS-IYPQLATISAVMDDKNHLINYICVFEDISVRKAHEEKLQRM 393 >UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=B1XZA8_LEPCP Length = 1147 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 165/490 (33%), Positives = 263/490 (53%), Gaps = 25/490 (5%) Query: 311 AEIQNAQSWSATI--RQRDGAPA----GILQIKTSSGAETSAFIERVADISQHMAALALE 364 A++ + W I R +DG+P I ++ G + + ++ DI+ H+ Sbjct: 654 AQLDHTGLWQGEIWNRHKDGSPVPELLSISAVRDPHG-QVTHYVGVFTDIT-HL------ 705 Query: 365 QEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDS 420 ++S +E L DP+T LPNR +N LD + +A V L+ +D +D+ DS Sbjct: 706 -KESEARLEFLAHHDPLTHLPNRLLFNNRLDQALHQAEREGRRLAVLLLDLDRFKDINDS 764 Query: 421 LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV--SLENDVSNITQIADELRNVV 478 G+ D+ L V R ++L+ L R+ G +F L+ L +D + ++A EL + + Sbjct: 765 YGHLAGDELLKYVAQRLTQRLRQSDTLARLGGDEFALLMHDLRHD-DDAARLASELLSGL 823 Query: 479 SKPIMIDDK-PFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMN 535 S+P + + +SIGI D G+ LL A A+ + +G +++++ M Sbjct: 824 SEPWRSSEGVEVSVGVSIGICIYPDHGRTPQTLLQGADAALYRAKGDGRGVYRYYADEMT 883 Query: 536 EMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFI 595 + +ERL + A L+ A+++ QL L YQPQ+ +G + G EAL RW DP G +PP RFI Sbjct: 884 RIARERLHIEARLRRALADGQLLLHYQPQVDLRSGRIIGAEALVRWQDPEQGLIPPVRFI 943 Query: 596 PLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMH 655 P+AE G I IG WV+ EACRQ W + ++VN+S F L QV + Sbjct: 944 PVAEATGLIGEIGAWVLGEACRQARAWLDAGLPALTVAVNVSPRQFHQADLATQVMQVLV 1003 Query: 656 AWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVT 715 G+ L +E+TE +ME + E + +Q LR +GVG+++DDFGTG+S L+ L P+ Sbjct: 1004 ETGLPPTHLELELTEGALMEREAEALQVLQRLRGLGVGVAIDDFGTGYSSLASLKRFPID 1063 Query: 716 EIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQG 775 +KID+SF+ + + + AI ++G SL + V+AEGVET EQ L++ +C QG Sbjct: 1064 VLKIDRSFITDIPDDPDDMEIAAAIIAMGHSLGILVLAEGVETAEQLAFLQQRNCDRYQG 1123 Query: 776 YFFSRPLPAE 785 + SRPLPA+ Sbjct: 1124 FLRSRPLPAQ 1133 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 1/132 (0%) Query: 118 YLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 + ++ D + + +E+ R D V++ D R IV NRAFT + GY +E Sbjct: 573 FSGVLTDLTDRLQAEERLRLAAQVFDSTQEGVMITDARRRIVSVNRAFTTLLGYTETEVL 632 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 G P +L+ D +Q L T Q E + G + SIS V D Sbjct: 633 GQTP-RMLSSGRHDRDFYEAMQAQLDHTGLWQGEIWNRHKDGSPVPELLSISAVRDPHGQ 691 Query: 238 LQNLVMTFSDIT 249 + + V F+DIT Sbjct: 692 VTHYVGVFTDIT 703 >UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SY75_PSYIN Length = 591 Score = 269 bits (688), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 164/457 (35%), Positives = 260/457 (56%), Gaps = 20/457 (4%) Query: 351 VADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNR----NNLHNYLDDLVDKAVSPVV 406 +A ++Q + + E+ K + + L +D +TGLPNR + LH+ L V + V Sbjct: 133 LAIVNQDLTFQSKEKAKLAEELNDLAFYDTLTGLPNRRLLIDRLHHALASNVRQGCESAV 192 Query: 407 YLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSN 466 I +DH +D+ D+LG+ D L++ R L+ + R+ G +F+L+ LEN N Sbjct: 193 MFIDLDHFKDINDTLGHEVGDLLLIQTAQRLESCLRKGDTVARLGGDEFMLI-LENLDEN 251 Query: 467 ITQIADELRNVVSKPIMIDDKPFPL-------TLSIG-ISYD-LGKNRDYLLSTAHNAMD 517 + A + + + K + +KP+ L T+SIG + +D G + L+ A AM Sbjct: 252 PIEAATKAKAIADKILAELNKPYQLDMHKCHSTVSIGAVFFDHQGNTAEDLIKQADIAMY 311 Query: 518 YIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEA 577 ++ GGN +FF+P M E + R+ L L+ AI +Q L YQ Q+ ++ + G EA Sbjct: 312 QAKQAGGNLIRFFNPKMQESINARITLENELRIAIEKSQFHLYYQIQMDSD-NRVLGAEA 370 Query: 578 LARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEW--RSQNIHIPALSVN 635 L RW +P HG V P+ FIP+AEE G I +IG+WVI AC Q+ W +SQ + L+VN Sbjct: 371 LIRWTNPEHGLVLPATFIPIAEETGLILSIGKWVIETACAQIKVWQKKSQTRDLT-LAVN 429 Query: 636 LSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEI-FKRIQILRDMGVGL 694 +SA FR +QV A+ I G+ L +E+TES++ ++DTE+ ++ L +GV Sbjct: 430 VSAKQFRQKDFVDQVQSAVQRHAIPGNLLKLELTESLL-QYDTEVTIAMMKALNKIGVQF 488 Query: 695 SVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAE 754 S+DDFGTG+S L L LP+ + KID+SFV T+ A+++AI ++ Q L++ V+AE Sbjct: 489 SLDDFGTGYSSLQYLKRLPLDQFKIDQSFVRDIATDNNDKAIVKAIIAMAQILDIDVIAE 548 Query: 755 GVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 GVET+EQ ++L C + QGY FS+P+P ++ + Sbjct: 549 GVETEEQQQLLLGKGCTLYQGYLFSKPIPIDQFDALI 585 >UniRef50_A0YBW6 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBW6_9GAMM Length = 799 Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 147/434 (33%), Positives = 250/434 (57%), Gaps = 11/434 (2%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNR----NNLHNYLDDLVDKAVSPVVYLIGVDHIQDVID 419 E + ++ E++ +D +TGL NR N L + + +L + S + L+ +D + V D Sbjct: 349 EIKNAQTQFEEMAYYDMLTGLANRRLFRNRLEHVVSNLKKEQSSLGLILVDLDRFKSVND 408 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV--SLENDVSNITQIADELRNV 477 ++G+ D+ L V R ++ ++ + R+ +F ++ ++N + +A+++ Sbjct: 409 AMGHDAGDKLLKIVAGRLQQCVRASDTVARLSSDEFAIILPGIKNSRTT-AHVAEKVLTA 467 Query: 478 VSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMN 535 + +P++I++ LT SIGI+ G + ++ A A+ + + NG N +QFF+ MN Sbjct: 468 IQQPVLINETEQRLTASIGIAIAPQNGTDAKTIIKNADLALFHAKDNGRNNYQFFTVEMN 527 Query: 536 EMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFI 595 + +R+ L LK+A+ N+ LVYQP+I + G L G EAL RW+ + G V P+ FI Sbjct: 528 IQLIDRVALTHDLKQAVKNSDFTLVYQPKICLKQGNLVGFEALIRWNHKIRGAVGPTEFI 587 Query: 596 PLAEEIGEIENIGRWVIAEACRQLAEWRSQNI--HIPALSVNLSALHFRSNQLPNQVSDA 653 P+AE+ G I +GRWVI AC QL + I +++VNLSA F+ L + + D Sbjct: 588 PVAEQTGLIIPLGRWVITTACEQLRTMYDEEIVNDSVSMAVNLSAHQFQDEHLVDFIRDR 647 Query: 654 MHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLP 713 ++ + I Q +E+TES++ME+ ++++ LR +G+ +S+DDFGTG+S L L LP Sbjct: 648 INTFDIKPGQFEIELTESVLMENFDNAIEKLEALRQLGIQISIDDFGTGYSSLGYLKRLP 707 Query: 714 VTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVI 773 V +K+D+SFV +K + + A+ ++ +LN TVVAEGVET++Q + L C Sbjct: 708 VNTVKVDRSFVTDIPNDKSDMEITSAVIAMAHNLNYTVVAEGVETEQQLQFLEHSGCDYG 767 Query: 774 QGYFFSRPLPAEEI 787 QGYFFS+PLP E+ Sbjct: 768 QGYFFSKPLPDHEL 781 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 153/432 (35%), Positives = 245/432 (56%), Gaps = 18/432 (4%) Query: 379 DPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVV 434 D +TGLPNR+ L + L+ V A + + +D+ + V D+LG+ DQ L V Sbjct: 440 DTLTGLPNRSLLEDRLNQAVAGARRRGQMVALLMFDLDNFKVVNDTLGHTAGDQLLRSVA 499 Query: 435 NRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQ------IADELRNVVSKPIMIDDKP 488 R R ++ R+ G +FV+V ++N+T+ +A+ RN+++ P + + Sbjct: 500 ARIRSFVRNCDTFARLGGDEFVIV-----LTNLTRMDDAVTVAESFRNLLAMPFFLGGRE 554 Query: 489 FPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGA 546 +T S+GIS D G + L+ A AM +I+++G N +QFF+ MN+ V RL + Sbjct: 555 IFITASMGISLFPDDGDTMEALIKKADTAMYHIKESGRNSFQFFAEEMNQKVNARLTIET 614 Query: 547 ALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIEN 606 L+ A+ ++ L YQP++ TG + G+EAL RW+ P G + P+ FIP+AE+ G I Sbjct: 615 GLRRALEKGEMLLHYQPRLEPGTGAVVGMEALVRWNSPDMGLISPADFIPIAEDSGLIVE 674 Query: 607 IGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTV 666 IG WV+A AC Q EW +SVN+SA F + ++V + G+ H + + Sbjct: 675 IGDWVLATACCQALEWHRMGHDSLRVSVNISARQFVGHDFVDRVVRIIEQSGLSPHFVEL 734 Query: 667 EITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDR 726 E+TE+ + + E K + LR+ G+ +S+DDFGTG+S L+ L PV +KIDKSF+D Sbjct: 735 ELTETALTHNVDETVKIMNRLRERGITISIDDFGTGYSSLNYLKRFPVDVLKIDKSFIDD 794 Query: 727 CLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEE 786 + + A++ I I +++ VVAEGVET EQ ++L + +C IQG++FSRPLP EE Sbjct: 795 MVKRREDAAIVATIIGIAHHMHMKVVAEGVETAEQMKLLMEGNCEEIQGFYFSRPLPPEE 854 Query: 787 IPGWMSS-VLPL 797 +++ +PL Sbjct: 855 FERYIAGRTVPL 866 >UniRef50_C1DCZ4 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCZ4_LARHH Length = 759 Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 157/419 (37%), Positives = 238/419 (56%), Gaps = 7/419 (1%) Query: 375 LIQFDPMTGLPNRNNLHNYLDDLVDKAV--SPVVYLIGVDHIQDVIDSLGYAWADQALLE 432 L DP+T L NR+ L L+D+ + S V I +D + + DS G+A D L Sbjct: 325 LASHDPLTRLLNRDALFRKLEDICLSGIEQSFAVLFIDLDRFKLINDSFGHATGDNLLRI 384 Query: 433 VVNRFREKLKPDQYLCRIEGTQFVLVSLEN--DVSNITQIADELRNVVSKPIMIDDKPFP 490 V R + + L R G +F L+ LE+ + + +A+ L + +S+PI ++++ Sbjct: 385 VAARLSFVVGSNALLARQGGDEFTLL-LEDTGQRTAVIDMANRLLDELSQPITLENQELH 443 Query: 491 LTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAAL 548 +T SIGI+ + GK+ LL A A+ + G N + FF+ ++ + +RL L AL Sbjct: 444 ITASIGIALAPEHGKDAATLLRHADTALYRAKDAGKNTFAFFTHTLHGLSNQRLALENAL 503 Query: 549 KEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIG 608 + A+ NQL L YQPQI L G+E L RWH P G V P+ FIPLAEE G I IG Sbjct: 504 RHALPRNQLTLAYQPQIDPHRQRLVGVEVLLRWHHPELGQVSPATFIPLAEETGLILPIG 563 Query: 609 RWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEI 668 RWV+ ACRQLA W + + ++VNLSA F L + + + G+ +L +E+ Sbjct: 564 RWVLETACRQLAAWDTAGFSVGHVAVNLSAHQFNDPGLTHHLKAVLSDSGLAARRLELEV 623 Query: 669 TESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCL 728 TES ++ + T + L+++GV LS+DDFGTG+S L++L P+ +KID++FV Sbjct: 624 TESTLINNPTAAIALMTELKELGVRLSIDDFGTGYSSLAQLKRFPLDTLKIDRTFVSGIP 683 Query: 729 TEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 + LA+ EAI ++ + L+L+VVAEGVET +Q + L + +IQGYF+S PL AE + Sbjct: 684 ADASDLAITEAIIAMAKKLSLSVVAEGVETADQRDFLARCGSELIQGYFYSPPLAAEAL 742 Score = 42.7 bits (99), Expect = 0.063, Method: Compositional matrix adjust. Identities = 49/236 (20%), Positives = 101/236 (42%), Gaps = 8/236 (3%) Query: 18 LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNR 77 +EQ+++G ++ E+ +++ N A ++ GY + G ++ L+P + E +R Sbjct: 88 IEQSLVGIYILKEH-TLIYANQRASEMLGYPAGALAGKSLVDLMPPGVAHEIGESVRRRH 146 Query: 78 EGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQ 137 + + L L ++G ++ G+ + + D S + + E+T Q Sbjct: 147 ---RDNITEQHYVLPLIHRNGHRLSVELHSRLTEFRGERVIVGVGLDISARL-ETERTLQ 202 Query: 138 LIIAV-DHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRI 196 L V ++ +++ D + ++ N AFT + GY +A G + + + Sbjct: 203 LAATVFENSSEGILLTDADGTLITVNPAFTRITGYTEEQALGRR-SRMFRTDHVGQATNM 261 Query: 197 RLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER 252 ++ Q L + Q E R G + S+S VYD + N V F+DI+ + Sbjct: 262 QMMQSLAEHGHWQGEMFDRHRDGRLYPVWLSLSAVYDE-DRVSNYVGVFTDISRRK 316 >UniRef50_C1D1W4 Putative diguanylate-cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D1W4_DEIDV Length = 856 Score = 269 bits (687), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 162/473 (34%), Positives = 255/473 (53%), Gaps = 9/473 (1%) Query: 328 GAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNR 387 G G + SGA + A ++ +AALA+ + + Q D +TGLPNR Sbjct: 379 GEVLGTFALYERSGAMSGAAHMDQLVRARDLAALAMRHHQLTAQLRHQAQHDALTGLPNR 438 Query: 388 NNLHNYLDDLVDKA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKP 443 + L ++++++ S + + +D + V D++G+ D L V +R + Sbjct: 439 SLFTERLAEILEQSERSRASTALLFVDLDEFKGVNDTVGHHVGDYVLQAVADRLLGCARR 498 Query: 444 DQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGK 503 + R+ G +F LV + + +A + N +++P ++ + F L SIGIS Sbjct: 499 GDVVARVGGDEFTLVLPFAEEPHAITVARRVLNELTRPFVVQGRAFHLGASIGISVSPQA 558 Query: 504 NRD--YLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAIS--NNQLKL 559 RD LL A AM Y K +G+ F +N+ + RL L + L+EA+ L+L Sbjct: 559 GRDGQTLLRHADLAM-YRAKREKSGFAVFEAQLNQQAQLRLQLASDLREALREPGANLEL 617 Query: 560 VYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQL 619 YQPQ+ G++ G EAL RW P G V P++FIP+AE+ G I +G WV+ EACRQ Sbjct: 618 HYQPQVRLHDGQVVGAEALVRWRHPHLGMVSPAQFIPVAEDTGMIVPLGTWVMEEACRQA 677 Query: 620 AEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTE 679 W + ++VN+SAL F + VS + A G++ +L VE+TES +ME E Sbjct: 678 VAWAAAGHGAMRVAVNVSALQFARPDFVDTVSATLRATGLEAGRLEVELTESAVMEDVKE 737 Query: 680 IFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEA 739 +R++ LR +GV ++VDDFGTG+S LS L LP+ +KID++F+ ++++A Sbjct: 738 SVERMERLRALGVSVAVDDFGTGYSSLSYLQRLPLNVLKIDRTFIQNLGVNATSRSVVQA 797 Query: 740 ITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 I + Q LNL VAEGVET ++ E L ++ CR QG+FF++PLPA + W+S Sbjct: 798 IVGLAQHLNLECVAEGVETPDEREALIEVGCRYAQGFFFAKPLPAPALLEWLS 850 >UniRef50_Q1JW15 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JW15_DESAC Length = 893 Score = 269 bits (687), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 171/436 (39%), Positives = 250/436 (57%), Gaps = 10/436 (2%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGV-----DHIQDVI 418 + +K++Q IE+L +D +TGLPNR + + L V +A L+GV DH + + Sbjct: 451 DSKKAQQEIERLAYYDTLTGLPNRVLIKDRLQQAVAQAQRSRA-LVGVLALDLDHFKKIN 509 Query: 419 DSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFV-LVSLENDVSNITQIADELRNV 477 DSLG DQ L V R + L+ + R+ G +FV L++ ++I A ++ ++ Sbjct: 510 DSLGIGCGDQMLKLVSQRLKGHLRQGDSVARMGGDEFVILITGIKSQNDIVTAAGKILDL 569 Query: 478 VSKPIMIDDKPFPLTLSIGIS-YDLGKNR-DYLLSTAHNAMDYIRKNGGNGWQFFSPAMN 535 +++P+ ID T S+GIS Y + D LL A AM ++ G N +QF+SP MN Sbjct: 570 LAEPVTIDGHDLVSTGSLGISVYPTDADEVDLLLKHADTAMYQAKETGRNLYQFYSPDMN 629 Query: 536 EMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFI 595 E ERL L + L A++ N+L+L +QPQI G + G EAL RW+ G + P FI Sbjct: 630 ERAFERLFLDSDLHRALARNELELYFQPQIDLAQGHVVGAEALLRWNHATKGQISPVVFI 689 Query: 596 PLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMH 655 PLAEE I +IG WVI EACR +W Q ++VNLSA FRS+ LP+ V+ +H Sbjct: 690 PLAEESDLILDIGGWVIEEACRHARQWHDQGYTDLRVAVNLSARQFRSD-LPDIVARVLH 748 Query: 656 AWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVT 715 G+ H L +E+TES++ME + LR +G LS+DDFGTG+S LS L P+ Sbjct: 749 ETGLPAHLLELELTESLLMERPELARTILNKLRYLGNHLSIDDFGTGYSSLSYLKHFPID 808 Query: 716 EIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQG 775 +KID+SFV + ++EAI ++ L L VVAEGVET +QFE +R+ C IQG Sbjct: 809 RLKIDRSFVKDLNVDPDDAIIVEAIIALAHGLRLNVVAEGVETSDQFEFMRQRGCDEIQG 868 Query: 776 YFFSRPLPAEEIPGWM 791 Y +RP+PA++ ++ Sbjct: 869 YVVARPMPADDFLRYL 884 >UniRef50_A4JTT5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JTT5_BURVG Length = 884 Score = 268 bits (686), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 164/473 (34%), Positives = 249/473 (52%), Gaps = 13/473 (2%) Query: 328 GAPAGI-LQIKTSSGAETSAFIERVADIS--QHMAALALEQEKSRQHIEQLIQ---FDPM 381 GAP + ++ T S + DIS H+ + RQ+ QL++ FD + Sbjct: 405 GAPMSLEIETTTHSAVLPIEYTFSAVDISGQSHVLCQMRDVTTRRQYEAQLVKQATFDEI 464 Query: 382 TGLPNR----NNLHNYLDDLVDKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRF 437 TGLPNR + L N L V I +DH + V D+LG+ + DQ L+ R Sbjct: 465 TGLPNRRLYIDRLSNALHRSKRDGTGCAVMFIDLDHFKRVNDTLGHPFGDQLLIAAAQRL 524 Query: 438 REKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIG 496 L+P + R G +FVL+ + D +A+ + + P + + + S+G Sbjct: 525 SGLLRPGDTVARFGGDEFVLLMSDFTDPMECRIVAEGIVEAFAAPFEVAARSISVGASVG 584 Query: 497 ISYDLGKNR--DYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISN 554 +S G D LL A AM + G +G+ FF+ MN V + L + A ++ A++ Sbjct: 585 VSVFPGDGTEPDILLQHADTAMYEAKSAGRSGFCFFNHDMNARVHDMLRIDARIRSALAR 644 Query: 555 NQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAE 614 N++ ++YQP I T E+ EALARWH GHVPP +FIP+AEE G I IG WV+ E Sbjct: 645 NEISVLYQPIIDPVTREIVKAEALARWHSEDLGHVPPDKFIPVAEENGLIAQIGDWVLQE 704 Query: 615 ACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMM 674 AC A+W + +SVN+SA F + V A+ + H L +EITE +++ Sbjct: 705 ACMNAAKWSKELASPITVSVNVSAKQFDDPTFVDSVFAALETSKLPAHLLELEITERVLI 764 Query: 675 EHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRIL 734 D + I LR++GVGLS+DDFGTG+S LS L P+ IKID++FV +++ Sbjct: 765 SDDETALETISALREIGVGLSLDDFGTGYSSLSYLTKFPLNTIKIDRAFVRDLDHDEQTQ 824 Query: 735 ALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 L AI ++ +SL+L ++AEGVET+EQ + L C +QG++F RP+ + E+ Sbjct: 825 NLTRAIIAMAKSLDLKLIAEGVETQEQADKLVLYGCEYLQGFYFGRPMTSSEL 877 >UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KEH4_CYAP7 Length = 1027 Score = 268 bits (686), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 226/803 (28%), Positives = 383/803 (47%), Gaps = 89/803 (11%) Query: 28 INENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGM 87 IN+ ++ + ++L EEVIG +I + PE I + G +V Sbjct: 267 INDQGIILDYKLQEQQLLSTAPEEVIGKSI--------QEVFPEPIGNQLYEGIQQVLLT 318 Query: 88 SRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDAS----VEMAQKEQTRQLIIAVD 143 + L LE + RF +++ + +A++RD S E+A +E +L + Sbjct: 319 RQPLSLEYSLNIEDKKRFFEARIVQLNQTEIIAVIRDISARKHTELALRESEERLSTIIS 378 Query: 144 HLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM---QPDTLLNIPEF----PADN-- 194 +++LD E ++ N A +FG + G P + N E P Sbjct: 379 TNPNGLLILDREGKVLFVNPAAEILFGRPKKDLMGQILGLPIIVNNYSEIEILQPTGKMV 438 Query: 195 --RIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER 252 RIR ++LW+ +++ FL AS+ V D L Q + TE+ Sbjct: 439 IARIRQVKILWE---EKEAFL------------ASLVDVTD-LKGAQKQLKILKQATEQS 482 Query: 253 Q----IRQLEGNI--LAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWAS 306 I EG+I + + E+I +N +L +S ++ W + Sbjct: 483 PVSVIITDAEGHIEYVNRKFEKLTGYTRQEVIGKN-PRLLKSGKIS----QDQYKQLWRT 537 Query: 307 SSHGAEIQNAQSWSATI--RQRDGA----PAGILQIKTSSGAETSAFIERVADISQHMAA 360 + G Q W ++++G A I IK G T FI DI++ A Sbjct: 538 LTSG------QEWHGEFHNQKKNGELFWESASISPIKNEEGVITH-FIAIKEDITRRKAQ 590 Query: 361 LALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQD 416 + ++ +D +TGLPNR + L + +A V I +D ++ Sbjct: 591 DRILAYQAN--------YDALTGLPNRFLAIDRLKLAILQAERQEQRVAVMFIDLDRFKN 642 Query: 417 VIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQ------I 470 V D+LG+ + D L +V R ++ L+ + R+ G +F+++ + N+ Q I Sbjct: 643 VNDTLGHEYGDLLLKQVAERLKKCLRKSDTVARLGGDEFLII-----IPNLKQPSHCKGI 697 Query: 471 ADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQ 528 A ++ + + KP + ++ ++ SIGI+ D G + + L+ A AM ++ G N ++ Sbjct: 698 AKKILSSLEKPFNLLEEEAFISASIGITLYPDDGDDVNALMRNADTAMYLGKRGGRNDFK 757 Query: 529 FFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGH 588 F++ MNE + R+++ L +A+ ++ LVYQP + +T ++ G EAL RW++P G Sbjct: 758 FYTLGMNETNRTRIIIENLLHQALKKKEIYLVYQPIMELKTEKVIGAEALLRWNNPQLGQ 817 Query: 589 VPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPN 648 V P +FIP+AEE G I +G WVI++AC+++ +W++Q I +++VNLS FR ++L Sbjct: 818 VSPDQFIPIAEETGLINQLGAWVISQACQEVVQWKAQGTPI-SVAVNLSPRQFRDSKLLK 876 Query: 649 QVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSR 708 ++DA+ GI H L +EITE +++E + L M LS+DDFGTG+S LS Sbjct: 877 IITDAIAVNGITNHDLELEITEKLLLEDSPGSQGILSQLHQMNFPLSIDDFGTGYSALSY 936 Query: 709 LVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKI 768 L+ P +KID+SF+ ++ + L++ I ++ LNL V+AEGVET EQ L+ Sbjct: 937 LIKFPFNRLKIDRSFITDMTHSQKAMGLVKTIIAMSHGLNLQVIAEGVETSEQLNSLKSQ 996 Query: 769 HCRVIQGYFFSRPLPAEEIPGWM 791 C QGYFFSRPL EE ++ Sbjct: 997 GCDYAQGYFFSRPLTGEEFRYYL 1019 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 27/243 (11%) Query: 21 NMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGG 80 N G ++++ +V+F NPAAE L+G +++++G + + I Sbjct: 380 NPNGLLILDREGKVLFVNPAAEILFGRPKKDLMGQILGLPI------------------- 420 Query: 81 KARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLII 140 + E+++ + G + R K+ E K +LA + D + ++Q + L Sbjct: 421 ---IVNNYSEIEILQPTGKMVIARIRQVKILWEEKEAFLASLVDVTDLKGAQKQLKILKQ 477 Query: 141 AVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQ 200 A + VI+ D E HI NR F ++ GY E G P LL + D +L + Sbjct: 478 ATEQSPVSVIITDAEGHIEYVNRKFEKLTGYTRQEVIGKNP-RLLKSGKISQDQYKQLWR 536 Query: 201 LLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGN 260 L EF + GE W ASISP+ + + + + DIT R+ + Sbjct: 537 TLTSGQEWHGEFHNQKKNGELFWESASISPIKNEEGVITHFIAIKEDITR----RKAQDR 592 Query: 261 ILA 263 ILA Sbjct: 593 ILA 595 >UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAC3_SULNB Length = 813 Score = 268 bits (686), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 150/447 (33%), Positives = 259/447 (57%), Gaps = 14/447 (3%) Query: 351 VADISQHMAALALEQE--KSRQHIEQLIQFDPMTGLPNRNNLHNYLD---DLVDKAVSPV 405 V DIS A +QE K + + D +TGLPNR + L+ L ++ + + Sbjct: 363 VRDISDKKKA---QQELLKQKDILHHQAHHDALTGLPNRTLFSDRLEHGLKLAERHLGKL 419 Query: 406 -VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN-- 462 ++ I +D+ + + DSLG+ D+ L+ V R + K++ + L R+ G +F ++ +EN Sbjct: 420 ALFFIDLDNFKQINDSLGHQIGDKVLVVVSKRLKAKIRQEDTLARLGGDEFTII-MENFK 478 Query: 463 DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIR 520 DV ++ +A +++ V+++P+ I+ ++ SIGIS+ +N + L+ A AM + Sbjct: 479 DVQQVSVLAQKIQKVLNQPMHIEGHTLYISCSIGISFYPQDTQNANDLVKYADAAMYKAK 538 Query: 521 KNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALAR 580 + G N +QF+S M + ER+V+ A+L++AI N + L YQPQ+ A+T + G+EAL R Sbjct: 539 EEGRNNFQFYSTEMTTLAYERVVMEASLRQAIKNEEFILYYQPQVNAQTSRMTGMEALIR 598 Query: 581 WHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALH 640 W P G + P +FIPLAEE G I I RWV+ A +Q+ EW ++ + LS+NLS Sbjct: 599 WEHPHLGMILPDKFIPLAEESGLILEIDRWVMRTAMKQVREWYARGLDPGVLSLNLSMRQ 658 Query: 641 FRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFG 700 + + + + +H + L E+TE MM+ + + ++ MG+ +++DDFG Sbjct: 659 LKDENFIDVIKEYLHMMSFEPEWLEFEVTEGQMMKRPDDAVASLGEIKSMGISIAIDDFG 718 Query: 701 TGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKE 760 TG+S L L LPV+ +KID+SF+ ++ A+++A ++ +SL+L+++AEGVE +E Sbjct: 719 TGYSSLGYLKRLPVSRLKIDQSFIHGIPEDRENAAIVKATIALAKSLSLSIIAEGVENEE 778 Query: 761 QFEMLRKIHCRVIQGYFFSRPLPAEEI 787 Q E L C +QGY++ RP+ A++I Sbjct: 779 QKEFLLFNGCISMQGYYYGRPMTADQI 805 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 268 bits (686), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 203/698 (29%), Positives = 331/698 (47%), Gaps = 51/698 (7%) Query: 118 YLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 Y + + E A + Q QL ++ + V + D ++V N AF + A Sbjct: 132 YTDITDRKAAETALRTQHNQLQTVIESIPSAVSLFDSAGNLVLFNTAFPRLLDVPAELAK 191 Query: 178 -GMQPDTLLNIPEF-----PADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV 231 G+ +TL P D + L+ + + TR K V Sbjct: 192 PGVSMETLFRFNAMRGEYGPGDPEKIVATLMERAKNPSHHYFERTRPNGKTL------EV 245 Query: 232 YDVLAHLQNLVMTFSDITEERQIRQLE-------GNILAAMCSSPPFHEMGEIICRNIE- 283 V V ++DI+E R + E + A + + H + I E Sbjct: 246 RGVPLAEGGFVTVYTDISERRASAEREQLAQKVYSHTPAGIIFTDDQHRILSINPATTEM 305 Query: 284 ------SVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSAT--IRQRDGA--PAG- 332 ++ ++ L +L G+ + +I SWS+ + Q++G+ PAG Sbjct: 306 TGYEPFELIGQTVFGLISLDEGI----SQKDFQEQISMRGSWSSELEVTQKNGSNFPAGA 361 Query: 333 -ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLH 391 I ++ + ++ +ADI+ E++++ + + Q D +TGLPNR L Sbjct: 362 RINRVDDPQSGLPAHYVWILADIT--------ERKQAEDRMRHIAQHDALTGLPNRLALL 413 Query: 392 NYLDDLVDKAV----SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYL 447 L L+ +A + V I +D + + D+LG+ D+ L EV R L+ ++ Sbjct: 414 MRLAQLLPEARRHGWTVAVMFIDLDRFKIINDTLGHQVGDEMLREVACRLSNLLRETDFV 473 Query: 448 CRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKN 504 R+ G +FV++ + ++ ++ ++ + +S I + + SIGIS D G + Sbjct: 474 ARLGGDEFVIILPSISSPADAAIVSGKIISALSTAIEAEGHELHTSPSIGISIFPDDGPD 533 Query: 505 RDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQ 564 D +L A AM + + G N +QFF+ MN ERL + L+ AI+ N+L LV+QPQ Sbjct: 534 GDIVLKNADTAMYHAKAAGRNNYQFFAADMNRTAAERLNIERKLRHAIARNELSLVFQPQ 593 Query: 565 IFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRS 624 AE G+EAL RWH P G + P+RFIP+AEE G I IG WV+A AC ++A W + Sbjct: 594 FRAEDTTPTGVEALLRWHHPTDGMISPARFIPVAEETGMIVEIGDWVLATACHEMARWIN 653 Query: 625 QNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRI 684 + ++VN+SA R V++A+ G+ L +EITES +ME+ E + Sbjct: 654 AGLKPLRIAVNVSARQLRRRDFCETVANALTTSGLPAELLELEITESSVMENPQEAIHIL 713 Query: 685 QILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIG 744 + L MGV L++DDFGTG+S L+ L P+ +KID+SFV + A+ ++ Sbjct: 714 ERLGRMGVTLAIDDFGTGYSSLAYLKLFPIDHLKIDRSFVADIEHDLNDRAIAFGTIALA 773 Query: 745 QSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPL 782 SL L V+AEGVET++Q E+LR C +QG+ FS+PL Sbjct: 774 HSLGLNVIAEGVETEDQHELLRANGCDEVQGFLFSKPL 811 >UniRef50_C5V2W0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V2W0_9PROT Length = 1275 Score = 268 bits (686), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 157/439 (35%), Positives = 248/439 (56%), Gaps = 12/439 (2%) Query: 363 LEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS-----PVVYLIGVDHIQDV 417 L Q+K+ ++ L +D +T LPNR L + ++ + A V++L +DH V Sbjct: 699 LLQKKALAELDHLKHYDALTDLPNRALLEDRIESSITHARQYERFIGVIFL-NLDHFHTV 757 Query: 418 IDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRN 476 D L +A DQ L+ R + + R+ FV+ + N I + A+ + Sbjct: 758 NDMLSHAGGDQVLIATAKRLMDAAPAQASISRLSADTFVIALPDLNTSEEINRTAELIAQ 817 Query: 477 VVSKPIMIDDKPFPLTLSIGIS-YDL-GKNRDYLLSTAHNAMDYIRKNG-GNGWQFFSPA 533 + +P+ + D+ L+ +GIS Y + G + L+ A A+ ++ G N ++F+S + Sbjct: 818 KIYQPLTVADQSVQLSARMGISVYPIDGNDATTLMKHADAALADAKQCGVRNSFRFYSSS 877 Query: 534 MNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSR 593 MNE + L +GA L+ AIS N+L L YQPQ+ TG++ G EAL R + P G + P Sbjct: 878 MNEHAHKLLTMGAELRNAISQNRLVLHYQPQVDIITGQIIGAEALIRINHPERGIISPGE 937 Query: 594 FIPLAEEIGEIENIGRWVIAEACRQLAEWR-SQNIHIPALSVNLSALHFRSNQLPNQVSD 652 FI +AEE G I +G WVI EACRQ+ +W +NI + +++NLS L + LP VS Sbjct: 938 FISVAEETGLIIPMGTWVIREACRQMQQWHLDKNIEL-TIAINLSPLQLHQSDLPEIVSL 996 Query: 653 AMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSL 712 A+H G++ L +E TES +M++ E + + MG+ LS+DDFGTG+S LS L Sbjct: 997 ALHDSGLNARYLELEFTESAIMKNVRETVAIMNKFKAMGLHLSIDDFGTGYSSLSYLKQF 1056 Query: 713 PVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRV 772 PV ++KID+SFV + A+++AI ++G++L +T +AEGVET+ Q LR ++C+ Sbjct: 1057 PVDKLKIDQSFVSNITQDPNDAAIVQAIIALGRTLGMTTIAEGVETEAQLGYLRSVNCKE 1116 Query: 773 IQGYFFSRPLPAEEIPGWM 791 +QGY +S PLPAEE + Sbjct: 1117 MQGYLYSAPLPAEEFAALL 1135 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 268 bits (685), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 167/471 (35%), Positives = 253/471 (53%), Gaps = 26/471 (5%) Query: 333 ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHN 392 I I+T G +T +++ D+++ ++S +++ L D +T LPNR H+ Sbjct: 250 ISAIRTGDG-QTESYVGVFTDLTR--------IKESEENLLYLSGHDALTELPNRLLFHD 300 Query: 393 YLDD-LVDKAVSP---VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLC 448 L+ LV+ A S V ++ +D + + DS+G+ D L EV R R L Sbjct: 301 RLNQTLVESADSGSIVAVLIVDLDRFKVINDSMGHEVGDSLLCEVATRLRAICPAKATLA 360 Query: 449 RIEGTQFVLVSLENDVSNITQ------IADELRNVVSKPIMIDDKPFPLTLSIGIS-YDL 501 R+ G +F +V + N+TQ +A E+ V++PI I + F + SIG++ Y L Sbjct: 361 RLGGDEFGIV-----LPNMTQNRDAALLAQEVLTRVAQPITISEVEFAVGASIGMTVYPL 415 Query: 502 -GKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLV 560 G+ L+ A +AM + +++G N +QF+ +N R++L + L+ A+ + L Sbjct: 416 DGEKPSVLMRNAESAMYHAKQSGRNNFQFYRSELNTASLARILLESGLRNAVDRQEFLLF 475 Query: 561 YQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLA 620 YQPQ+ TG+L G+EAL RW P G V P FIPLAEE G + +G+W + EACRQ Sbjct: 476 YQPQMELATGKLIGMEALIRWQHPEQGMVSPGEFIPLAEETGLVIPMGQWALKEACRQSK 535 Query: 621 EWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEI 680 W Q +SVNLS + FR V + G+ H L +E+TES+ M E Sbjct: 536 VWMDQTGVPLRISVNLSGIQFRLPDFTEMVMRTVGESGLPPHCLELELTESIAMGDVEET 595 Query: 681 FKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAI 740 +++ IL GV L++DDFGTGFS LS L P+ +KID+SFV C + A++ A Sbjct: 596 LEKLTILSRFGVLLAIDDFGTGFSSLSYLKKFPIDTLKIDQSFVRNCTRDPEDAAIIRAF 655 Query: 741 TSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 ++ SLNL V+AEGVE EQ E L + C IQGYF+ RPL ++ +M Sbjct: 656 INLAHSLNLEVIAEGVEHLEQLEFLAQESCDEIQGYFYGRPLSGDKFEMFM 706 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 268 bits (685), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 157/421 (37%), Positives = 239/421 (56%), Gaps = 9/421 (2%) Query: 375 LIQFDPMTGLPNRNNLHNYLDDLV-----DKAVSPVVYLIGVDHIQDVIDSLGYAWADQA 429 L + D +TGLPNR L++ L+ + D+ +++L +DH +++ DSLG+ DQ Sbjct: 321 LAEHDYLTGLPNRLLLNDRLNQALTIARRDQEFIALMFL-DLDHFKNINDSLGHEVGDQL 379 Query: 430 LLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKP 488 L V R L+ + R G +F+++ E + + ++A++L + P I Sbjct: 380 LKMVARRLESCLRASDTISRQGGDEFMILLPELTNYFSPAEVAEKLLAAATVPYEIGSHE 439 Query: 489 FPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGA 546 ++ SIGI+ D G+N + L A AM + + G N +QFF+ AMNE V E L + Sbjct: 440 ITVSASIGIAVFPDDGENGELLTKNADAAMYHAKSLGRNNYQFFTRAMNERVMEIAELES 499 Query: 547 ALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIEN 606 L+ A+ N+ L YQP+I TG++ G EAL RW P G V P RFIP+AE+ G I Sbjct: 500 KLRRAVERNEFVLYYQPKIDIRTGQVVGAEALIRWQHPSWGLVAPDRFIPIAEDSGLIRP 559 Query: 607 IGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTV 666 IG WV+ EACRQ EW++ + ++VNLS + R + +VS+ + G++ L + Sbjct: 560 IGLWVMREACRQNQEWQAAGLARIPVAVNLSTVQLRQHNFLQEVSEILLMSGLEPDYLEL 619 Query: 667 EITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDR 726 E+TES+ + +TE+ + LR MGV L++DDFGTG+S LS L LP+ +KIDKSF+ Sbjct: 620 EVTESVAIHAETEVINWLHKLRSMGVKLALDDFGTGYSSLSYLKRLPINNVKIDKSFIRD 679 Query: 727 CLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEE 786 T+ ++ AI + L L V+AEGVE Q E L+K C +QG+ SRP+PA+E Sbjct: 680 IETDPDDATIITAIIRMSHGLRLNVIAEGVENINQLEFLKKEGCDQMQGFIASRPVPADE 739 Query: 787 I 787 Sbjct: 740 F 740 >UniRef50_A1SU67 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Alteromonadales RepID=A1SU67_PSYIN Length = 1014 Score = 268 bits (685), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 220/827 (26%), Positives = 391/827 (47%), Gaps = 64/827 (7%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 TDA ++ +F + +G + + NP ++ GY+ EE++ N L Sbjct: 198 TDALKESEFLFRSQFDLGSIGIAITYPGKGWLRVNPRLCEILGYREEELLLLNWSELTHP 257 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV-YYLALV 122 D R H + +++ + +G S + + +KDG ++ +S +G V + +A + Sbjct: 258 DDR--HLDLYQYD-QMLTGEEDGYSLDKRFIRKDGESVYVHMTISCYRVDGAVQFVIAGI 314 Query: 123 RDASVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 D+S +++ R QL+ + + + E + V N + EM GY + Sbjct: 315 LDSSERKHAEDKIRGRKEQLLSVLSGSELGFWDWNIEANTVHRNARWAEMLGYRFED--- 371 Query: 179 MQPDTLLNIPEFPADNRIRLQQ-----LLWKTARDQDEFLLLTRTGEKIWIKASISPVYD 233 +Q DT +N+ ++ R+ Q L +TA+ + E+ + TR GE WI + + + Sbjct: 372 IQNDTSINLDSVHPNDCGRVWQSVTDHLEGRTAQHKIEYRMRTRQGEYKWI-LDCAKIVN 430 Query: 234 VLAHLQNLVM--TFSDITEER--------------------QIRQLEGNILAAMCSSPPF 271 Q L M T +DIT+ + + GNI+ ++P F Sbjct: 431 YGEDQQPLRMSGTHTDITKRKLAEESMQLASMVYQNSREAMTVTDSNGNIIT---TNPAF 487 Query: 272 HEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGA 329 EM + + + +SH + + + ++ + + W + R ++G Sbjct: 488 TEM---TGYSADEITGKSHTFIVSKQQDKRVY---QRMELALNSTGHWRGEVSCRHKNGE 541 Query: 330 PAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNN 389 L S E + RVA S E++KS + I + FD +TGL NR Sbjct: 542 NYMALLGINSIYNEDRSVHRRVAQFSD-----ITERKKSEKIIWKQANFDNLTGLSNRQM 596 Query: 390 LHNYLDDLVDKA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQ 445 H+ L +KA ++ + + +D + V D+LG+ DQ L++V R R ++ Sbjct: 597 FHDQLLHEKNKAQRRGLNVGLLFLDLDRFKAVNDTLGHNMGDQLLIDVAQRLRNCVRKRD 656 Query: 446 YLCRIEGTQF-VLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLG 502 + R G +F V++ + ++ ++A ++ +++P ++ ++ +T SIGI++ G Sbjct: 657 LVSRFGGDEFTVIIGGLKNTQSVERVAQKILCELAEPFLLGEQNVYITPSIGITFYPKDG 716 Query: 503 KNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQ 562 + + LL A AM ++ G N + +F+ +M E V+ L L+ A+ NQL+L YQ Sbjct: 717 EATEMLLKNADQAMYSAKEKGRNCYHYFTNSMQEQVERGGQLANDLRYALKKNQLELYYQ 776 Query: 563 PQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEW 622 P + TG++ EAL RWH P G V P+ FIP+AEE G I IG WV +A Q+A W Sbjct: 777 PIVALGTGQIRKAEALIRWHHPELGMVSPAEFIPIAEETGTIVEIGDWVFRQAADQVAHW 836 Query: 623 RSQNIHIPALSVNLSALHFRSNQLP-NQVSDAMHAWGIDGHQLTVEITESMMMEHDTEI- 680 R + + +S+N S + FR + + A G+ G + +EITE ++++ + I Sbjct: 837 RREYQNDFQVSINKSPVQFREGGSDITSWLEHLLALGLPGQAVVIEITEGLLLDGSSRIV 896 Query: 681 FKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAI 740 ++ RD G+ +S+DDFGTG+S +S L + +KID+SFV + + L EAI Sbjct: 897 IDKLLAFRDSGIEVSLDDFGTGYSSMSYLRKFHIDNLKIDQSFVRNLKVDSDDMILCEAI 956 Query: 741 TSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 + L + V+AEG+E +EQ +L C QGY F++PLP ++ Sbjct: 957 IIMAHKLGMQVIAEGIENEEQRRLLSAAGCDYGQGYLFAKPLPEKDF 1003 >UniRef50_Q0G5H0 GGDEF family protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G5H0_9RHIZ Length = 684 Score = 268 bits (684), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 158/468 (33%), Positives = 253/468 (54%), Gaps = 23/468 (4%) Query: 339 SSGAETSAFIE---RVADISQHMAALALEQE------KSRQHIE--QLIQFDPMTGLPNR 387 SSGA++ AF VA ++ + E K+R I+ + D +TG+PNR Sbjct: 207 SSGADSGAFSAMAMSVALVALLIVFTGFSSEVIEFRNKTRSEIDLNYIATHDELTGVPNR 266 Query: 388 NNLHNYLDDLV----DKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKP 443 L D D + +I +D + V D+LG+ D L V NR ++ Sbjct: 267 RKFSEILADRCAKTRDTGAEFSLIMIDLDRFKPVNDTLGHTTGDAVLKRVANRLEHVIRA 326 Query: 444 DQYLCRIEGTQFVLVSL--ENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD- 500 +L R+ G +F +++L D SN+ ++ D + +V+S+P +I+ L S+G++ Sbjct: 327 SDFLARLGGDEFAIIALGSTGDRSNVLRLCDRIIDVLSRPFIINGHVIELGASLGVAIAP 386 Query: 501 -LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKL 559 G D L +A A+ + G + ++ F AM + V+ R L L+ A++ + ++ Sbjct: 387 AHGTTADDLTQSADIALYAAKDAGRSTYKLFETAMADEVQLRRSLEIDLRRALNREEFEV 446 Query: 560 VYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQL 619 YQPQ+ A++G+ G EAL RW P G + P FIPLAEE+G I IG WV+ +ACR Sbjct: 447 YYQPQVDAKSGDYSGAEALIRWRHPQRGMLSPVVFIPLAEELGLIGPIGNWVLRQACRDA 506 Query: 620 AEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTE 679 W S H+ +++VNLS +LP V ++ G+D +L +EITE+ ++ +D + Sbjct: 507 VTWPS---HL-SVAVNLSPAQMMDRRLPKSVKSILNETGLDPARLELEITETSLIGNDVQ 562 Query: 680 IFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEA 739 + LR MG+ +S+DDFGTG+S LS L P+ IKID+SF+DR T+ A+++A Sbjct: 563 ALAVLNELRAMGIAISLDDFGTGYSSLSYLHRFPINRIKIDRSFIDRIPTDVDSAAIVQA 622 Query: 740 ITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 I +G SL + + AEG+E +EQ+ + C +QGY FS+P+P EI Sbjct: 623 IAKLGGSLGMKITAEGIENEEQWSFSKTEGCDHLQGYLFSKPIPGSEI 670 >UniRef50_C5V0J9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0J9_9PROT Length = 1321 Score = 268 bits (684), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 213/792 (26%), Positives = 382/792 (48%), Gaps = 58/792 (7%) Query: 35 MFFNPAAEKLWGYKREEVIGNNI-DMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQL 93 +F +P+ + L+G+ + + G + D ++P D + G + + + L Sbjct: 540 IFLSPSCQSLFGFSAQHMTGCAVTDFIMPEDCVTFQNALLLM---GSTDQAQTL---LFR 593 Query: 94 EKKDGSK-IWTRFALSKV--SAEGKVYYLALVRDAS----VEMAQKEQTRQLIIAVDHLD 146 + D SK +W + L ++ G + +A RD + ++A ++ R+ ++ Sbjct: 594 SQHDRSKTVWIEYTLKRIINPRSGAIEIVANGRDVTQRHTYQLAIEDLHRRNAKILEAAG 653 Query: 147 RPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE------FPADNRIRLQQ 200 ++ + P+ IV N ++ G+ SE +G L + + +P D + Q Sbjct: 654 DGLVSISPDGKIVYTNERVRQILGWGGSELAGKSCCQLFHARDADTSHDYPCDCPLIAQN 713 Query: 201 LLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQI---RQL 257 L + + + G I + S + + D L V+ F + TE+ +Q Sbjct: 714 LNKEVGVSATGYFS-HKEGRAIRVDYSCTQMTD-HGKLSGAVLVFRESTEQSMTFDQKQT 771 Query: 258 EGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHG------- 310 I A + + I + + + + + P +S H Sbjct: 772 SDVIFNAASEAVMVTDANRRITSVNRAFIKITGYAAEEMIGQTPKLLSSGVHTQNFYDAM 831 Query: 311 -AEIQNAQSWSATI--RQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALA--LEQ 365 A ++ + W+ I R+++G +I G+ T+ F E + D+ ++A + + Sbjct: 832 YASLEASGYWAGEIWNRRKNG------EIYPQWGSITAIFGE-LGDLRSYIAVFSDVSKA 884 Query: 366 EKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD-----KAVSPVVYLIGVDHIQDVIDS 420 +++ +H+ L D +TGL NR+ +YL+ +D + V I +D + + D+ Sbjct: 885 KQAEEHLYHLANHDSLTGLANRSKFVDYLNHTLDLARRNRGHKVAVAFIDMDRFKIINDT 944 Query: 421 LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRN---V 477 LG+ DQ L + R + + + L R G +FVLV + V +A+ +R V Sbjct: 945 LGHTIGDQFLKAIATRISSQCRNEDLLSRWGGDEFVLVM--DRVDGPDSVAEAVRRMMEV 1002 Query: 478 VSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMN 535 V KP++ID TLS+GIS+ D +N L+ A AM +++NG NG+ FF+ Sbjct: 1003 VRKPLLIDGHELEPTLSVGISFFPDDAQNTTDLVKAADTAMYRVKENGRNGYAFFTELQA 1062 Query: 536 EMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFI 595 + K++ + + L A+ N+ L YQPQ+ +TGE+ G+EAL RW P G++ P+ FI Sbjct: 1063 DESKKKFEIVSELNRALRLNEFVLNYQPQVKPDTGEIVGLEALIRWEHPERGYLSPANFI 1122 Query: 596 PLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMH 655 PLAEE+G I +G WVI C+Q++ W+ + P ++VN++ S L + V + Sbjct: 1123 PLAEELGMINQVGEWVIKAVCQQMSAWKLGGVTYPRVAVNVAPSQLDSG-LADYVQRTLA 1181 Query: 656 AWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVT 715 +G+ L +E+TE +E E+ ++ LR++G+ LS+DDFGTG+S L L + P+ Sbjct: 1182 LYGLTADCLEIELTEG-ALERGGEVAPVLKQLRELGITLSIDDFGTGYSSLGHLKNFPIN 1240 Query: 716 EIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQG 775 KIDKSFVD + A+++ I ++G++LN+ VV EGVET Q + L I ++IQG Sbjct: 1241 CFKIDKSFVDGLPDSVQDAAIVKTILTLGENLNVEVVVEGVETLAQRDFLTSIGAKIIQG 1300 Query: 776 YFFSRPLPAEEI 787 Y + +PL E+I Sbjct: 1301 YCYGKPLSVEKI 1312 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 57/245 (23%), Positives = 102/245 (41%), Gaps = 16/245 (6%) Query: 18 LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI-PRDLRPAHP-----E 71 LE G V I+ + ++++ N ++ G+ E+ G + L RD +H Sbjct: 649 LEAAGDGLVSISPDGKIVYTNERVRQILGWGGSELAGKSCCQLFHARDADTSHDYPCDCP 708 Query: 72 YIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMA- 130 I N + G+S K+G I ++ ++++ GK+ LV S E + Sbjct: 709 LIAQNLN----KEVGVSATGYFSHKEGRAIRVDYSCTQMTDHGKLSGAVLVFRESTEQSM 764 Query: 131 --QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 ++QT +I + V+V D R I NRAF ++ GY E G P LL+ Sbjct: 765 TFDQKQTSDVIF--NAASEAVMVTDANRRITSVNRAFIKITGYAAEEMIGQTP-KLLSSG 821 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 + + L + E + GE SI+ ++ L L++ + FSD+ Sbjct: 822 VHTQNFYDAMYASLEASGYWAGEIWNRRKNGEIYPQWGSITAIFGELGDLRSYIAVFSDV 881 Query: 249 TEERQ 253 ++ +Q Sbjct: 882 SKAKQ 886 >UniRef50_Q2BRK3 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BRK3_9GAMM Length = 992 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 199/699 (28%), Positives = 333/699 (47%), Gaps = 61/699 (8%) Query: 122 VRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 +R + + E++ + D + I + IV N+ +MFGY +E ++P Sbjct: 316 LRSNAQQQKDLERSEHRLQNFDKVSSEAIFIHNSEGIVDVNKQAEKMFGYTHTELLQLKP 375 Query: 182 DTLLNIPEFP-ADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 D + P A ++R Q A ++TR G I + + V + + Sbjct: 376 DDFFSAESLPVAMEKVRTQSETPYQAT------VITRDGTAIPVTVNGKAV--LWNGQKA 427 Query: 241 LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESV-------LNESHVSL 293 +F DIT + ++ M S F ++ +++ + +N+S L Sbjct: 428 RAASFRDITRRIEYQK------RLMASEDRFRQLSDLVAEGLLIYSENKIIDVNQSLCEL 481 Query: 294 FALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSG----AE-TSAFI 348 F R + S +E+ + QS +A D A A L ++ + G AE T+A + Sbjct: 482 FGQRREDLLE----SDLSELFSEQSLTAINNHPDTAAALELSLERADGTLFPAEITTASM 537 Query: 349 E---------RVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD 399 + + DIS++ EQE +HI QFD +T +PNR + + + Sbjct: 538 QFDDGLFIVLSIRDISRYK-----EQE---EHILYQAQFDLLTHIPNRFLAKDRAEQAIR 589 Query: 400 KAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF 455 A + I +D + V DS+G+ DQ L + RF ++ L R G +F Sbjct: 590 NADKHDGKLALMFIDLDGFKKVNDSMGHEVGDQLLQQATRRFVSCIEKQHTLARHGGDEF 649 Query: 456 VLVSLENDVSNITQ---IADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLS 510 +++ + D+++ T +A+++ S P I++K +T SIGIS D N LL Sbjct: 650 III--QEDIADPTDSEIVAEKILQQFSNPFSIENKQLIVTASIGISIYPDDANNYSDLLR 707 Query: 511 TAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETG 570 A M + +G N + +++ MN++ +L L +L+EA+ N + LV+QP I G Sbjct: 708 AADIGMYKAKHDGRNRFHYYTQEMNDIATRKLALDNSLREALQNREFNLVFQPLICNVKG 767 Query: 571 E--LYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIH 628 + + G EAL RW P+ G V P FIP E+ G I IGRWV+ +AC+Q W Sbjct: 768 QPKVQGAEALIRWTSPVLGQVSPVEFIPHTEQSGLIIPIGRWVLEQACQQAKRWVDDGQE 827 Query: 629 IPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILR 688 +SVN+S F+ N L ++ A+ + G+ H L +E+TE +++E E+ +Q++ Sbjct: 828 DVFISVNVSPRQFKGNDLLRDLTSALESSGLHPHHLNIEVTEGLLIEASPELNNTLQLIT 887 Query: 689 DMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLN 748 DMG+ LS+DDFGTG+S L+ L P +KID+SF+ L+ A ++ L Sbjct: 888 DMGINLSMDDFGTGYSSLNYLKKFPFNNLKIDRSFIKELPDNSDSAILVTATIAMAHQLG 947 Query: 749 LTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 L+V AEG+ET EQ+ LR + C +QG++ +P+PA E Sbjct: 948 LSVTAEGIETAEQYNYLRGLRCDRLQGFYMGKPVPANEF 986 >UniRef50_A6QAR7 Signal transduction protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAR7_SULNB Length = 958 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 195/686 (28%), Positives = 344/686 (50%), Gaps = 55/686 (8%) Query: 141 AVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL---LNIPEFPADNRIR 197 A+++ D +++ D +RHI N AF GY E G P+ L L PE + Sbjct: 285 AIENSDNVIVITDAQRHIEYVNDAFELRTGYKKEEVLGENPNILKSDLVSPEIYKN---- 340 Query: 198 LQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVY-------------DVLAH------L 238 L + L + Q E + + G I+ K SI P++ DV A+ L Sbjct: 341 LNETLDSGEKWQGELINKRKDGSLIYEKVSIVPIFMDGELIQYLAIKLDVTAYIRQQKIL 400 Query: 239 QNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRN 298 Q + +I + I I++ +P F ++ E ++ + + + +L+ Sbjct: 401 QQAATVYENIGDGIVITDENKKIISI---NPAF---SDLFGYTKEELVGKEPMIIMSLKE 454 Query: 299 GMPIHWASSSHGAEIQNAQSWSATIRQ--RDGAPAGI-LQIKTSSGAETSAFIERVADIS 355 + + + H ++ A WS + +DG + L I + DI Sbjct: 455 D-KVFYGNMWH--QLLTAGRWSGRVENVTKDGKVLPVWLTIAVVRNEK--------QDIQ 503 Query: 356 QHMAALALEQE--KSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV----SPVVYLI 409 ++A +E K L D +TGLPNR++ +++++ A V I Sbjct: 504 NYIAIYTNLEEIIKMETKANYLAYHDSLTGLPNRSSFEMRINEILSVADIEKDKIAVLFI 563 Query: 410 GVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV-SLENDVSNIT 468 +D + + D+LG+ D+ L+E+ +R + +L D L RI G +FV++ L+ Sbjct: 564 DLDRFKVINDTLGHHIGDEMLIELAHRIQTQLDNDTLLARIGGDEFVVIMKLKMHKKEAG 623 Query: 469 QIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNG 526 + A++L +V+ +PI I + T SIGI+ D GK+++ ++ A +AM + ++ G + Sbjct: 624 EQAEKLLDVIREPIDIQNYHLNTTASIGIAIYPDDGKDKNEIVKHADSAMYHAKEKGKDT 683 Query: 527 WQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLH 586 +QF++ ++ V+ RL L L AI +L L +QPQ E+ + G+EAL RW + Sbjct: 684 FQFYTKQLSLDVEARLNLEQELLHAIERKELLLHFQPQYALESRNIIGVEALLRWKNEQL 743 Query: 587 GHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQL 646 G V P +FI +AEE G I +IG +V EAC+ W+ + I I ++S+N+S++ FR + Sbjct: 744 GIVSPEKFIGIAEETGLIVSIGYFVFEEACKTYMHWQKEGIDIDSISINMSSIQFREEDI 803 Query: 647 PNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGL 706 ++ + + GI H++ +EITE +ME+ T ++ LR++G +S+DDFGTG+S + Sbjct: 804 FERLQEIILRIGIPAHKIEIEITERFIMEYSTINLTILEDLRNIGCKISIDDFGTGYSSM 863 Query: 707 SRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLR 766 S L L + IKIDKSF+ + + +AI ++ +SL V+AEG+ET EQ L+ Sbjct: 864 SYLKRLALDTIKIDKSFITDLPHDSHDAMVSKAIIALSKSLGYQVIAEGIETPEQEAFLK 923 Query: 767 KIHCRVIQGYFFSRPLPAEEIPGWMS 792 K C + QG++F++P+ +E+ + + Sbjct: 924 KNGCDIGQGFYFAKPMTSEDFISFFN 949 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 57/242 (23%), Positives = 120/242 (49%), Gaps = 14/242 (5%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 F A+E + V+ + + + N A E GYK+EEV+G N ++L + P + + Sbjct: 282 FRYAIENSDNVIVITDAQRHIEYVNDAFELRTGYKKEEVLGENPNILKSDLVSPEIYKNL 341 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK-VYYLALVRDASVEMAQK 132 + G E EL ++KDGS I+ + ++ + +G+ + YLA+ D + + Q+ Sbjct: 342 NETLDSG----EKWQGELINKRKDGSLIYEKVSIVPIFMDGELIQYLAIKLDVTAYIRQQ 397 Query: 133 EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPA 192 + +Q +++ +++ D + I+ N AF+++FGY E G +P ++++ E Sbjct: 398 KILQQAATVYENIGDGIVITDENKKIISINPAFSDLFGYTKEELVGKEPMIIMSLKEDKV 457 Query: 193 DNRIRLQQLL----WKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 QLL W + R ++ +T+ G+ + + +I+ V + +QN + ++++ Sbjct: 458 FYGNMWHQLLTAGRW-SGRVEN----VTKDGKVLPVWLTIAVVRNEKQDIQNYIAIYTNL 512 Query: 249 TE 250 E Sbjct: 513 EE 514 >UniRef50_Q15QH2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15QH2_PSEA6 Length = 785 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 149/450 (33%), Positives = 246/450 (54%), Gaps = 6/450 (1%) Query: 345 SAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA--V 402 SA V +S + + L + I QL FD +T +PNR N++ D++ +A Sbjct: 324 SANTREVETLSSAFSDMQLGIQDREAQIHQLAYFDELTHIPNRIQFSNHISDMIRQAPEC 383 Query: 403 SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN 462 +V +I VD +++ D+LG+ D+ L+ + R + + R+ G ++ V L+ Sbjct: 384 ELIVLMIDVDRFKEINDTLGHDLGDELLIAIAKRLHSHTQNKGFCARLGGDEYAWVGLQE 443 Query: 463 DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIR 520 + +A L +V +P I++ + S+GI+ + L+ A AM Y Sbjct: 444 ANTRPQDVAQNLLSVFEQPFKIENLVLDVDCSMGIALYPQHASSLQGLMQCADIAM-YSC 502 Query: 521 KNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALAR 580 K+ N + ++ A+N+ RL L + LK A+ QL+L YQP++ + ++ +E L R Sbjct: 503 KDQHNPFALYNDALNKHSVVRLSLMSQLKGALGEGQLELHYQPKLTIASDKIETLECLIR 562 Query: 581 WHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALH 640 W P HG VPP FIPLAE+ G I ++ +W + AC Q+ WR +NI +++VN+SA+ Sbjct: 563 WFHPEHGFVPPDDFIPLAEQTGAIRHVTQWALRTACEQVKRWRDKNICF-SVAVNISAID 621 Query: 641 FRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFG 700 LP + ++ + + LT+E+TES +M K + +LRDMGV LS+DDFG Sbjct: 622 LVDLSLPASIESLLNEFDLPPSALTMEVTESAVMGDPENALKALNLLRDMGVTLSIDDFG 681 Query: 701 TGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKE 760 TG+S +++L +PV E+KIDK+FV T + +++ + S+ Q+L LT VAEGVE E Sbjct: 682 TGYSSMAQLKKMPVDELKIDKAFVLALATNQEDRVMVKTLVSLAQNLGLTTVAEGVEDLE 741 Query: 761 QFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 E LR++ C QGY+ ++ L A+E+ W Sbjct: 742 TLEFLREVGCTKAQGYYMTKALRADELISW 771 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 153/433 (35%), Positives = 241/433 (55%), Gaps = 13/433 (3%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA----VSPVVYLIGVDHIQDVID 419 ++++S + I L D +T LPNR L + +A S V + +D +DV D Sbjct: 271 DRKQSEETIHHLAYHDALTDLPNRRMYVQQLSKEMMQAKRFQSSLAVLFLDLDRFKDVND 330 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN-DVSNITQIADELRNVV 478 S G+ D L+E R + LKP + R+ G +F ++ + D + T++A+++ + Sbjct: 331 SFGHDVGDMLLIEASKRLQACLKPGDVVARLGGDEFTIMQNQLLDRNEATELAEQIMYQL 390 Query: 479 SKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNE 536 +P +D F ++ SIGI+ G N + LL A A+ ++ G NG+ FF P+M Sbjct: 391 QRPFELDGHVFNVSCSIGIALYPQDGDNPEDLLKRADTALYTVKSRGKNGYDFFDPSMEA 450 Query: 537 MVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIP 596 ER+++ +++AI Q ++ YQP+I T + G+EAL RW P G +PP+RFIP Sbjct: 451 KSLERILMENEMRKAIEQEQFQIYYQPKIDIATSAMTGMEALVRWVHPELGIIPPNRFIP 510 Query: 597 LAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHA 656 +AEE G I +G W++ +AC+Q W Q + +SVNLSA L + D + Sbjct: 511 IAEETGMILALGEWILKQACKQNKNWHDQG-YTLKVSVNLSARQIYQKDLVEMIKDILQE 569 Query: 657 WGIDGHQLTVEITESMM--MEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPV 714 + H L +EITES+ ME T + ++I RD+G+ +S+DDFGTG+S S + SLPV Sbjct: 570 TKLSPHWLELEITESIFVKMEEATAVLQQI---RDIGIQISIDDFGTGYSSFSYIKSLPV 626 Query: 715 TEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQ 774 IKID SF+ + A+++AI +I QSLN+ V+AEG+E +Q L++ C Q Sbjct: 627 DTIKIDASFIRDIHHNQESQAIVKAIVTIAQSLNMNVIAEGIELHDQVAALKENGCDHGQ 686 Query: 775 GYFFSRPLPAEEI 787 GY FS+PLP ++ Sbjct: 687 GYLFSKPLPTDDF 699 >UniRef50_A1TM92 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TM92_ACIAC Length = 724 Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 154/424 (36%), Positives = 237/424 (55%), Gaps = 14/424 (3%) Query: 379 DPMTGLPNRNNLHNYLDDLVDKAVSPV---------VYLIGVDHIQDVIDSLGYAWADQA 429 DP+T LPNR + L + + V + +D + + DS G+A D Sbjct: 273 DPLTLLPNRLLFEDRLSHALLRLDRMRRRDAGQRLGVMFVDLDGFKPINDSFGHAAGDAI 332 Query: 430 LLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN--DVSNITQIADELRNVVSKPIMIDDK 487 L R R + + + R+ G +F+L+ LEN D ++ +A+ L N + +P + K Sbjct: 333 LRSAAERLRLQARESDTVARVGGDEFLLL-LENVNDPADCLAVANRLLNSLGQPFEVAGK 391 Query: 488 PFPLTLSIGIS-YDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGA 546 + S+GI Y RD L++ A AM ++ GGNG+ F M+ +L L Sbjct: 392 TVQIACSVGIVVYPDHGERDKLVANADAAMYAAKRAGGNGYAMFESHMDSDATAQLSLQH 451 Query: 547 ALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIEN 606 L++AI+ +L L YQP+I A G + G+EAL RW PL G+V P+ FIP+AE G I Sbjct: 452 DLRQAIARGELSLHYQPKIDARRGRINGVEALLRWRHPLRGNVSPAEFIPVAERFGLIAQ 511 Query: 607 IGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTV 666 +G WVI EACRQ+A W + + +++NLSA R + L +++ DA+ G+ L Sbjct: 512 LGNWVIEEACRQMAAWSWDGLRMR-VAINLSAYQLRESGLADRIRDALQRHGVPASHLLC 570 Query: 667 EITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDR 726 EITES+ ME + I+ L +GV LS+DDFGTG+S L L SLP ++KID+SFV Sbjct: 571 EITESVAMEDTRATQRAIEELGRIGVYLSIDDFGTGYSSLHYLRSLPARQLKIDRSFVRD 630 Query: 727 CLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEE 786 ++ A+++A+ + +L L VVAEGVET+ Q ++L +HC +QG++F+RP+PA+ Sbjct: 631 LEEQEDARAVVDAVVRLAHALGLRVVAEGVETEGQRDILAAMHCDELQGFYFARPMPADT 690 Query: 787 IPGW 790 + W Sbjct: 691 LLAW 694 >UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Proteobacteria RepID=Q21WW2_RHOFD Length = 874 Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 158/436 (36%), Positives = 238/436 (54%), Gaps = 6/436 (1%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA----VSPVVYLIGVDHIQDVID 419 E +++ + I+ L FD +TGLPNR L + + + A + L+ +DH ++V D Sbjct: 420 ESKQAERKIQLLAHFDSLTGLPNRVLLTDRCNLALSAAQRNGTPLALLLLDLDHFKNVND 479 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVS 479 SLG+ D+ L+ + R + ++ +CR+ G +F+LV E + + IA+ L Sbjct: 480 SLGHRVGDEVLIALAGRLKGAVREQDTVCRLGGDEFILVLPETNAAGAAHIAEMLLQSAL 539 Query: 480 KPIMIDDKPFPLTLSIGISYDLGKNRDY--LLSTAHNAMDYIRKNGGNGWQFFSPAMNEM 537 ++ +T SIGI+ G D+ L A AM +K+G N ++FF+ M Sbjct: 540 VAFELEPHELTVTPSIGIALFPGDGSDFDTLSRCADAAMYRAKKDGRNNYRFFTAEMQAR 599 Query: 538 VKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPL 597 + L L AL+ A+ NQL+L YQPQI +G + G EAL RW P G VPP+ FIP+ Sbjct: 600 SERTLTLENALRRALERNQLQLHYQPQISLASGRVVGAEALLRWSHPELGAVPPAEFIPV 659 Query: 598 AEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAW 657 AE G I IG WV+ + +QL W + ALSVNLS++ FR LP V+ ++ Sbjct: 660 AETCGLILPIGEWVLRTSVQQLKAWIDAGMLPIALSVNLSSVQFRHADLPELVTSILNEA 719 Query: 658 GIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEI 717 + H L +E+TE++ M + L + GV +S+DDFGTG+S LS L V +I Sbjct: 720 QLPAHLLELELTENVAMTDPLGAIAVMNNLHERGVRMSIDDFGTGYSSLSYLKKFRVYKI 779 Query: 718 KIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYF 777 KID+SFV + A++ AI S+ SL + +AEGVET+ Q E L+ C +QGY+ Sbjct: 780 KIDQSFVRDITEDSDDKAIVGAIISMATSLGMQTIAEGVETEGQLEFLKAKGCTEVQGYY 839 Query: 778 FSRPLPAEEIPGWMSS 793 FSRPLP E+ +M + Sbjct: 840 FSRPLPVEQFEAFMGT 855 >UniRef50_B1Y5R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Burkholderiales RepID=B1Y5R0_LEPCP Length = 863 Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 178/519 (34%), Positives = 266/519 (51%), Gaps = 42/519 (8%) Query: 303 HWASSSHGAEIQNAQSWSATIRQRDG-------------APAG-ILQIKTSSGAETSAFI 348 WA+ A A + IR RDG +PAG +L ++ S G Sbjct: 350 QWAAQQARAVPGEASATVLRIRTRDGGERWLEHVVKPVFSPAGQLLGLRGSYG------- 402 Query: 349 ERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP---- 404 DI+Q + ++ Q ++ + D +TGLPNR +LD V KA Sbjct: 403 ----DITQ--------RRQAEQQLDYVTHRDALTGLPNRALFTEFLDQAVQKAAHSRGEF 450 Query: 405 VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDV 464 + I +D + + +SLG + DQ L+EV R RE L + R+ G +F ++ +E+DV Sbjct: 451 SLLFINLDGFKTINESLGRSAGDQLLIEVARRLRELLPGVDAVARVGGDEFNVI-VEHDV 509 Query: 465 SN--ITQIADELRNVVSKPIMIDDKPFPLTLSIGIS-YDL-GKNRDYLLSTAHNAMDYIR 520 + I +A + N +S + + + IGI+ Y G + LL++A A+ + Sbjct: 510 AGLGIDLVAQRIINALSHSYQLGAQSAYIGACIGIAQYPADGPAAESLLNSADAALHRAK 569 Query: 521 KNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALAR 580 G N +FFSP + +ERL L A L+ A+ +L L YQPQ+ +G + G+EAL R Sbjct: 570 AQGRNVLRFFSPELTIRARERLSLEADLRRALQQGELALHYQPQVDLRSGRIVGVEALLR 629 Query: 581 WHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALH 640 W P G + P FIPLAEE G I +G WV+ AC Q+ W + +VN+SA+ Sbjct: 630 WRHPQRGWIAPGAFIPLAEECGLIIELGDWVLRAACEQIRHWSDAGVAPRQTAVNISAVQ 689 Query: 641 FRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFG 700 S L + V + A GI +L +EITES +M FK + LR +GV LS+DDFG Sbjct: 690 ISSGGLLDTVRRTLAATGIAPDRLELEITESFVMFERERSFKLLADLRALGVQLSIDDFG 749 Query: 701 TGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKE 760 TG+S L+ L L V ++KID SFV + ++++A+ ++G SL L V+AEGVE E Sbjct: 750 TGYSSLAYLQQLEVHKLKIDISFVRNMTRNRGNASIVKAVIAMGHSLGLEVIAEGVEEIE 809 Query: 761 QFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI 799 Q L + C V+QGY S+PLP ++I + S P+ I Sbjct: 810 QAAHLLALQCDVMQGYLVSKPLPVDDITRLLESFEPIVI 848 >UniRef50_Q47ZI3 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47ZI3_COLP3 Length = 858 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 164/475 (34%), Positives = 259/475 (54%), Gaps = 22/475 (4%) Query: 330 PAGILQIKTSSGAETS-AFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRN 388 P + I+ S G + + F +DIS E++ + + IE L +D +T LPNR Sbjct: 382 PQWLTIIEISEGVDNNKVFAAIFSDIS--------ERKLAEKRIENLAFYDELTQLPNRR 433 Query: 389 NLHNYLDDLV----DKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPD 444 + +D + K ++ I +D+ ++V D+ G+ D L R E K Sbjct: 434 LFFDRVDMALAIAHRKNNKMALFFIDLDYFKEVNDNYGHRIGDLLLRSFAKRLTESSKEG 493 Query: 445 QYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DL 501 + RI G +F L+ + +V +I + + + + +P I+ +T SIGI+ + Sbjct: 494 DTVARIGGDEFTLLLTDMREVDHICKACNRIVEKLRQPYHIEGHALNITTSIGIAVYPED 553 Query: 502 GKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVY 561 G N + L+ A AM + G N +Q F+PAMN +ER ++ + L+ A+ +N+L+L Y Sbjct: 554 GTNEEELMKNADIAMYRAKDIGRNSFQLFTPAMNAHSQERSLIQSHLRLALVHNELELNY 613 Query: 562 QPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAE 621 Q QI TG++ G+EAL RW++P+ G V P++FIP+AEE+G I I WV+ AC+Q Sbjct: 614 QAQIHGVTGKVMGVEALLRWYNPILGQVSPAQFIPMAEELGFIAEIDHWVLEHACKQRKL 673 Query: 622 WRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMM---MEHDT 678 W Q + ++VN+SALHF L V + + L VEITE M+ T Sbjct: 674 WLDQGLDCGRIAVNISALHFHQGNLVASVESVLAQSQLPAELLEVEITEGCFIKQMDKAT 733 Query: 679 EIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLE 738 I K+ L+ MGV +++DDFGTGFS LS L SLP+ +KID SF+ + R + Sbjct: 734 SILKQ---LKKMGVKVALDDFGTGFSSLSYLTSLPIDTLKIDASFIAKLPHNFRESQITS 790 Query: 739 AITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 AI ++ Q+LNL +VAEGVET+ Q L + C ++QGYF+++P+ A+ +P + S Sbjct: 791 AIITLAQNLNLDIVAEGVETEAQKIFLIERGCEIMQGYFYNKPVCAKNLPRVIQS 845 >UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=3 Tax=Geobacter RepID=C6E7Z7_GEOSM Length = 721 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 149/435 (34%), Positives = 245/435 (56%), Gaps = 10/435 (2%) Query: 367 KSRQ-HIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA----VSPVVYLIGVDHIQDVIDSL 421 + RQ H++QL +DP+T LPNR ++ L +++A + V I +DH +D+ D+L Sbjct: 262 RQRQAHLQQLAHYDPLTRLPNRTLFYDRLAQALNQAERNRQALSVIFIDLDHFKDINDTL 321 Query: 422 GYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN--DVSNITQIADELRNVVS 479 G+ D L++V NR ++ + R+ G +F + + +N + N +A +L + + Sbjct: 322 GHRTGDLLLIDVANRLSTVVRSCDTVARLGGDEFTVFT-QNVMNADNAAIVAAKLNALFA 380 Query: 480 KPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEM 537 KP + + +T SIG++ + GK D LL A AM + + G N ++ F MNE Sbjct: 381 KPFQLGESEIYVTASIGVTLFPNDGKTVDELLMNADIAMYHAKACGKNVYKMFDRKMNEH 440 Query: 538 VKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPL 597 ER+ L + L+ A+ + L YQP++ TG + +EAL RW P G + P +FI L Sbjct: 441 ANERVTLLSDLRLALEREEFVLHYQPKVDLLTGNVTSVEALVRWMHPRLGMLAPDKFIRL 500 Query: 598 AEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAW 657 +EE G I + WV+ AC Q +W+ QN+ ++VNLS HF+ + + + A Sbjct: 501 SEESGFIVELTDWVLRTACTQAKKWQEQNLGSVRVAVNLSPYHFQRQDVKEAIFSVLDAT 560 Query: 658 GIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEI 717 G++ L +EITES +M++D + LR++G+ +SVDDFGTG+S LS L P+ + Sbjct: 561 GLEPALLEIEITESALMQNDEYTCALFRELRELGMTISVDDFGTGYSSLSYLHRFPINTL 620 Query: 718 KIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYF 777 KID++F+ + A++ AI ++ +SLN+ +VAEGVET +Q E L+ C IQG+ Sbjct: 621 KIDRTFILNMMKSSEDQAIVTAIIAMAKSLNMQIVAEGVETVDQLEKLKDQGCHEIQGFL 680 Query: 778 FSRPLPAEEIPGWMS 792 SRP+ AE + + + Sbjct: 681 VSRPVAAESVTQFFT 695 >UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK01_THIDA Length = 1059 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 164/439 (37%), Positives = 239/439 (54%), Gaps = 14/439 (3%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDL--VDKAVSPVVYLIGVDHIQDVIDSL 421 E++ + + QL +DP+TGLPNR L + L V + LI +D+ + + D+L Sbjct: 605 ERKAAEHKVHQLAFYDPLTGLPNRELLGDRLQHAMQVRHGQVGALLLIDLDNFKTLNDTL 664 Query: 422 GYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV------SLENDVSNITQIADELR 475 G+A D L ++ R + L+ L R+ G +FV+V S + S T++ +++ Sbjct: 665 GHAMGDLLLQQIAQRLQTCLRKGDTLARVGGDEFVIVLEGLSASPGDAGSLATRVGEKIL 724 Query: 476 NVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPA 533 ++P + D T SIGI+ D D L A AM + +G N +FF PA Sbjct: 725 ASFARPFQLADYVHHCTASIGITLFNDRPTTLDELRKRADLAMYQAKAHGRNALRFFDPA 784 Query: 534 MNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSR 593 M +V R L L+EA+ +L YQ Q+ A G + G EAL RW P G + P+ Sbjct: 785 MQAVVAARAELEVDLREALRLGAFELHYQAQVDAR-GCVSGAEALLRWQHPQRGWIAPAS 843 Query: 594 FIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALS--VNLSALHFRSNQLPNQVS 651 FIPLAEE G I +G WV+ AC QL W S+ H+ LS VN+SA FR QV Sbjct: 844 FIPLAEETGLILPLGLWVLDVACAQLVAW-SKMPHMARLSLAVNVSARQFRQADFAAQVL 902 Query: 652 DAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVS 711 A+ G D +L +E+TES+M+++ + ++ L+ G+G S+DDFGTG+S L+ L Sbjct: 903 AAIERSGADPRRLKLELTESLMLDNLDDTILKMSALKAHGIGFSLDDFGTGYSSLAYLKR 962 Query: 712 LPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCR 771 LP+ EIKID+SFV L + ++ +I ++GQSLNL VVAEGVET Q L + C+ Sbjct: 963 LPLDEIKIDQSFVRDVLIDANDASIARSILALGQSLNLEVVAEGVETDAQHAFLAEHGCQ 1022 Query: 772 VIQGYFFSRPLPAEEIPGW 790 QGY F+RP PA + W Sbjct: 1023 AYQGYLFNRPQPARQFEAW 1041 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 160/459 (34%), Positives = 245/459 (53%), Gaps = 10/459 (2%) Query: 345 SAFIERVADISQHMAALALEQEKSRQ--HIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV 402 S + +S H+A + E+ Q HI + + D +T LPNR +H+ L + A Sbjct: 592 SLLRDEAGQVSHHVALFSDISERKEQEAHIRHMAEHDFLTDLPNRALIHDRLAQAIRAAA 651 Query: 403 SP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV 458 V + +DH +++ D+LG+A D+ L +V R + ++ + R G +FVL+ Sbjct: 652 RQKNRLAVLFLDLDHFKNINDTLGHAHGDELLKQVAQRLQHTVRGSDTVGRNGGDEFVLI 711 Query: 459 SLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNA 515 E + Q+A L + + +P ID + ++ SIGIS D G LL +A A Sbjct: 712 VPELASPAEAAQLAQRLLDDLRRPFQIDGQALAISTSIGISLFPDNGSELQELLVSADLA 771 Query: 516 MDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGI 575 M + + G N +QFF+P +N V ERL L L++A+ QL LVYQPQ + L G Sbjct: 772 MYHAKAQGRNRYQFFTPELNAQVAERLTLENHLRQALERQQLYLVYQPQFAIDNRRLVGC 831 Query: 576 EALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVN 635 EAL RW P G + P+RFIPLAEE G I IGRWV+ EACRQ A W + + ++VN Sbjct: 832 EALLRWQHPEQGLISPARFIPLAEETGLIVEIGRWVLDEACRQAAAWLAAGTPL-RVAVN 890 Query: 636 LSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLS 695 +SA L +V A+ + L +E+TES +ME + + +Q ++ G+ L+ Sbjct: 891 VSARQLGQPDLLAEVEAALARHRLPSCWLELEVTESTLMEDAEQAVRHLQAFKERGIHLA 950 Query: 696 VDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEG 755 VDDFGTG+S L+ L IKID++FV + A++ AI + ++L + +AEG Sbjct: 951 VDDFGTGYSSLTYLKRFSPDLIKIDRAFVMNLPDNRDDAAIVSAIVQLAEALGMQTLAEG 1010 Query: 756 VETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 VE++EQ + L + C V+QGY RP A E+ ++ Sbjct: 1011 VESEEQLDFLAQAGCDVVQGYLTGRPQSAGELTAQLAGA 1049 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 19/157 (12%) Query: 106 ALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAF 165 +L+ + + Y RD S ++Q R D + +++ D HIV NRAF Sbjct: 470 SLTSMQYQDHAYRSLRARDMSRRQQAEQQQRLAAKIFDTSSQAIVISDASNHIVMVNRAF 529 Query: 166 TEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQL---------LWKTARDQDEFLLLT 216 T++ GY EA G QP L + + PA + QQL +W +D + Sbjct: 530 TDITGYSAQEAIGRQPSLLSSGRQPPAFYQKMWQQLAQRGHWAGEIWNRRKDGTIY---- 585 Query: 217 RTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQ 253 W+ SIS + D + + V FSDI+E ++ Sbjct: 586 ----PEWL--SISLLRDEAGQVSHHVALFSDISERKE 616 >UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K2X7_AZOSB Length = 1070 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 158/430 (36%), Positives = 242/430 (56%), Gaps = 16/430 (3%) Query: 370 QHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPV--------VYLIGVDHIQDVIDSL 421 + +E+ ++D +TGLPNR LDD +++A+ V I +DH + V D++ Sbjct: 638 RELERQAKYDGLTGLPNRY----LLDDRLEQAIVAARRHERLLGVAFIDLDHFKVVNDNV 693 Query: 422 GYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSK 480 G+ D+ L + +R L+ R G +FV++ + D + +I L+ +++ Sbjct: 694 GHRQGDELLRQAASRLAAVLRDGDTAARQGGDEFVVLLPDLGDERDAFRILGRLQAALAE 753 Query: 481 PIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMV 538 P +DD+ F +T SIG+S G + D LL A AM + G N +FF+ MN V Sbjct: 754 PFRLDDRSFFVTCSIGVSLYPRDGGDGDTLLKHADIAMYQAKAAGRNVVRFFTAEMNIQV 813 Query: 539 KERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLA 598 ++RL L AL+ A+ N +L L +QPQ+ +G++ G EAL RW P G VPP RFIPLA Sbjct: 814 RDRLQLEGALRSALENGELHLAFQPQVDGGSGQVIGAEALLRWQHPELGAVPPVRFIPLA 873 Query: 599 EEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWG 658 EE G I IG WV+ ACRQ +W + ++VN+SA FRS LP ++++ + G Sbjct: 874 EETGLIGPIGEWVLRAACRQARQWEQAGRRL-RIAVNVSARQFRSPDLPARIAEILDETG 932 Query: 659 IDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIK 718 + L +E+TESM+M + + + L+ +GV L++DDFGTG+S + L P+ +K Sbjct: 933 LPPALLELELTESMLMGDAEQAEEMLHRLKQLGVSLALDDFGTGYSSFAYLQRFPIDTLK 992 Query: 719 IDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFF 778 ID+SFV + R A++ AI ++ SL + V+AEGVET Q L + C +QGY F Sbjct: 993 IDQSFVRSMVAGVRGEAIVVAIIALAHSLGMRVIAEGVETPLQQRQLFEFGCDELQGYLF 1052 Query: 779 SRPLPAEEIP 788 RP+PA E P Sbjct: 1053 GRPVPAAEFP 1062 >UniRef50_Q1JW23 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JW23_DESAC Length = 951 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 163/478 (34%), Positives = 261/478 (54%), Gaps = 16/478 (3%) Query: 322 TIRQRDGAPAGILQIKT----SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQ 377 R+RDG + + T S+G A + Q A LE++K Q ++ + Sbjct: 474 AFRRRDGTIISVEYVATPLIGSAGQHEGAVLIFKDLTRQQQAEERLEEKK--QLLDHMSN 531 Query: 378 FDPMTGLPNRNNLHNYLDDLVDKAVSPV----VYLIGVDHIQDVIDSLGYAWADQALLEV 433 D +TGLPNR + L +++A V I +D + + DSLG+ D+ L+ V Sbjct: 532 HDSLTGLPNRRLFQDRLYHAIERARRSSSEMSVLFIDLDRFKKINDSLGHELGDKLLISV 591 Query: 434 VNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQ-IADELRNVVSKPIMIDDKPFPLT 492 R + L+ L R+ G +FV++ E+ S+ IA L N +S+ ++ +T Sbjct: 592 ARRMQSHLRRSDTLARLGGDEFVVILEESSHSHFAAVIARNLLNELSEAFDVESHRLFVT 651 Query: 493 LSIGIS---YDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALK 549 SIGIS YD ++ L+S+A AM + + G N +QF++P MN ++ L + L+ Sbjct: 652 ASIGISRYPYD-AEDVVGLMSSADAAMYHAKSRGRNNFQFYAPEMNGRAQDFLEMETQLR 710 Query: 550 EAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGR 609 +A++ Q ++ YQPQ L G EAL RW+ P G VPP FI LAEE G I IG Sbjct: 711 DALALEQFEVYYQPQYDMRDQTLVGAEALLRWNHPERGMVPPGDFIALAEETGAIVPIGE 770 Query: 610 WVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEIT 669 WV+ + CRQ +W + + ++VN+S FRSN L + + G+ L +EIT Sbjct: 771 WVLMQVCRQNRQWMDEGLTPVRVAVNISIAQFRSN-LSQTLEQVLEQSGMPAELLELEIT 829 Query: 670 ESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLT 729 ESM+ME + E + L++ G+ +S+DDFGTG+S LS L LPV ++KID+SF+ + Sbjct: 830 ESMLMEDEEETITLLNELKEKGLHISIDDFGTGYSSLSYLRKLPVDKLKIDRSFIAHVVH 889 Query: 730 EKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 + A+ +I ++GQ+++L ++AEGVE +EQ + L + C + QG+ ++RP+ AE+ Sbjct: 890 NQSDAAITGSIIALGQNMDLRILAEGVEHEEQRDFLLQHRCYIAQGFLYARPMTAEDF 947 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 266 bits (680), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 220/826 (26%), Positives = 388/826 (46%), Gaps = 83/826 (10%) Query: 15 FPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIR 74 ALE++ + ++ +E + + N +L + REE+IG + +++ HP Sbjct: 12 LSALEESSVISI-TDEKGIITYVNHNFCQLSKFNREELIGKSHNIVDS----GFHPRNYF 66 Query: 75 HNREGGKARVEGMSRELQLEKKDGSKIWTRFALSK-VSAEGKVY-YLALVRDAS----VE 128 + +R + E++ KDG++ W L ++ G +Y Y+A+ D + +E Sbjct: 67 KSLWDTISRGKVWKGEMKNRGKDGTEYWLSMTLVPFMNDSGFLYQYVAIGTDITKRKLME 126 Query: 129 MAQKEQTRQLIIAVDHLDRPVIV--LDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 + + + L + LD IV D + I N F E+ Y + E G ++N Sbjct: 127 ESLAKTMKDLHDIKNALDESSIVAITDDKGVITYVNDKFCEISRYEVDELVG-NTHRVIN 185 Query: 187 IPEFPADNRIRLQQLLWKTARD----QDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 + + + +L +W+T + + E + G + W+ +I P D V Sbjct: 186 -SRYHSKSFFKL---MWETIKQGRVWKGEVKNRAKDGTEYWMNTTIVPFLDDRGVPYQYV 241 Query: 243 MTFSDITEE----------------RQIRQLE-----------GNILAAMCSSPPFHEMG 275 +DIT+ R ++ L+ GNI +C E+G Sbjct: 242 SIRTDITDRIEAETALAEALQNDFRRTVQNLQNCVFKIVTDQRGNITYTLCEGKIAEELG 301 Query: 276 EIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQ 335 E +L ++ +F + A+ + R+ + + Sbjct: 302 ----LTSERMLRKTSYEIFPY-----------------EVAEQMESYFRRAFAGESVTFE 340 Query: 336 IKTSSGAE--TSAFIERVADISQHMAALA--LEQEKSRQHIEQLIQFDPMTGLPNRNNLH 391 +K S T + IE +I + + ++ E++K+ + I + +D +T LPNR H Sbjct: 341 LKLSGNDYYITLSPIEENGEIVEMVGSMIDITERKKAEETIRYMAHYDSLTNLPNRTLFH 400 Query: 392 NYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYL 447 L + + KA V I +D +++ D+LG++ D L V NR L+ + + Sbjct: 401 EKLAEAMLKAKQKDEKIGVMFIDLDRFKNINDTLGHSIGDVLLQAVANRLICCLRKEDSV 460 Query: 448 CRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNR 505 R+ G +F + +IA + +S+ I +D +T SIGIS D G + Sbjct: 461 SRLGGDEFAIFLTGVTHREAGEIAQRIITSMSESITLDHIEIFITPSIGISMYPDDGDDI 520 Query: 506 DYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQI 565 + LL A AM ++ G N +QFFS +++++ ++L L L++A+ Q L YQP+I Sbjct: 521 EALLKHADAAMYLAKEQGKNNYQFFSEELHQVLAKKLQLERELRKALDEKQFTLHYQPKI 580 Query: 566 FAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ 625 +TG++ G+EAL RW P G +PP +FIP+AEE G I +G WV+ AC+Q W+ Sbjct: 581 HLQTGQIIGMEALIRWDHPDLGLIPPIQFIPIAEETGLIVPLGEWVMRTACQQTKAWQEA 640 Query: 626 NIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQ 685 A++VN+S F N L ++ + G+ L +EITESM + D I + + Sbjct: 641 GFTQLAVAVNISLRQFMQNNLIEMITSILEETGLAPQYLELEITESMALNVDYTI-RILN 699 Query: 686 ILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQ 745 L+ +GV +S+DDFGTG+S LS L P+ +KID+SF+ + + A+++ I + Sbjct: 700 RLKALGVSISIDDFGTGYSSLSYLSQFPIDRLKIDQSFLRNLNPQNQ--AIIKTIIHMAH 757 Query: 746 SLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 ++ + V+AEGVET E + L++ C +QGYF+S+PLP +EI ++ Sbjct: 758 NMKIAVIAEGVETHEHVDFLKEQLCNEVQGYFYSKPLPTKEIDSFL 803 >UniRef50_Q47V32 Sensory box/GGDEF family protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47V32_COLP3 Length = 682 Score = 266 bits (680), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 152/458 (33%), Positives = 250/458 (54%), Gaps = 15/458 (3%) Query: 342 AETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV--- 398 ++ S +I + DI+ ++KS + + D +T LPNR+ L L+ L Sbjct: 215 SQISNYICQFTDITN--------RKKSEEELHFHAYHDSLTSLPNRHLLFEKLNHLCVLH 266 Query: 399 -DKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVL 457 ++ V +D + + DSLG+ D+ L V NRF KL+ + + R G +F++ Sbjct: 267 QEQPTYFAVLFCDLDRFKMINDSLGHDVGDELLKSVANRFEAKLRDNDIIARTGGDEFIV 326 Query: 458 V-SLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGKNRDY--LLSTAHN 514 V E + N+ +I ++ ++ P F T+SIG+S + D L+S A Sbjct: 327 VIEGEKALKNLDKICLQILSLFEVPFQTKYGEFKTTISIGVSQFPSDSEDVRELISFADV 386 Query: 515 AMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYG 574 AM I+K+GGN + FF ++++RL L + + +AI +Q + YQPQ+ +T E+YG Sbjct: 387 AMYKIKKSGGNHYSFFDVKEKALIQQRLELESEITQAIEKDQFAVWYQPQVNTQTHEVYG 446 Query: 575 IEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSV 634 +E L RW+ P G +PP FIP+AE G I+ +G +V+ AC+QL +WR +NI +++ Sbjct: 447 VECLIRWNHPEQGLIPPDLFIPIAEANGSIKELGYFVLKTACQQLRQWRIKNIFTGVMAI 506 Query: 635 NLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGL 694 N+S F N L QV + + + +E+TES+ E + + LR++GV + Sbjct: 507 NVSLRQFERNDLLAQVKKTLVDEMLPAESIELEVTESLFSEDNNYHTPILCALRELGVKV 566 Query: 695 SVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAE 754 ++DDFGTG+S L RL SLP+ +KIDK FVD +A++ A + ++ + V+AE Sbjct: 567 AIDDFGTGYSSLQRLKSLPIDNVKIDKCFVDNIEHCPEDVAIVMATILLSKTFKVDVIAE 626 Query: 755 GVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 G+ET+EQ + L + C QGY +SRPL A + W++ Sbjct: 627 GIETQEQADKLSDLGCFNQQGYLYSRPLKAHDFEVWLA 664 Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 53/232 (22%), Positives = 98/232 (42%), Gaps = 17/232 (7%) Query: 24 GAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKAR 83 G +++N N E+ N + G+ +E V+G NID ++ + I GK+ Sbjct: 16 GILVLNLNGELEEVNEQFLAMTGFLKENVLGQNID-----EIDNCSAKKIL----SGKSA 66 Query: 84 VEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIA-- 141 + G + L +KDGS + + + L +++++ E T+ II Sbjct: 67 IYGHYHSI-LTRKDGSNLQVETCYFRQQTQNSAQILLFIQESNY----AELTKTSIIEQI 121 Query: 142 VDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQL 201 DH + +IV D + I N++F+ + GY E G P +LN + + Q Sbjct: 122 FDHTNEAIIVTDNQGLIQTVNKSFSNITGYSEEEVIGKTP-AILNSGKQDKYFYKKFWQQ 180 Query: 202 LWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQ 253 + Q E + GE +IS + + + + N + F+DIT ++ Sbjct: 181 IIDQGSWQGEIWNKRKNGEVYPEWLNISSIRNKESQISNYICQFTDITNRKK 232 >UniRef50_Q2SDG6 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SDG6_HAHCH Length = 686 Score = 266 bits (680), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 150/439 (34%), Positives = 243/439 (55%), Gaps = 12/439 (2%) Query: 364 EQEKSRQHIE----QLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQ 415 E ++ RQ E +L Q+D +TGLP R+ NY+ VD + + V+ +G+D + Sbjct: 241 EHQQKRQAAEARIIKLSQYDSLTGLPTRSLFTNYIAAAVDDSEALNQKFAVFCVGIDDFK 300 Query: 416 DVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVS-NITQIADEL 474 + + LGY+ D+ L R + +CR+ G QF L+ S + A+ L Sbjct: 301 SINEQLGYSQGDKLLQAFAERLLSQRDGVHTVCRLGGDQFALILFNVSSSYRVAAFAESL 360 Query: 475 RNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSP 532 +S+P I+++ P++ +IGI+ D ++ + +L A M + N +QF+ Sbjct: 361 LREISRPFEIEEQLTPVSCTIGIAIYPDDARDAEKILQKAEQTMMLAKSVANNHFQFYVA 420 Query: 533 AMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPS 592 +++ ++ER L L +AI N++L LVYQPQI + ++ G EAL RW P G VPP Sbjct: 421 SLDSEIRERKKLEKDLSKAIQNDELFLVYQPQIDLNSKQVVGCEALLRWRHPERGLVPPD 480 Query: 593 RFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSD 652 FIP+AE I IG WV+ EAC Q+ +WR+Q +I +++NLSA R + V Sbjct: 481 VFIPIAEANETILEIGDWVLHEACAQVNQWRNQGFNI-KVAINLSANQLRQKEFAPHVLK 539 Query: 653 AMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSL 712 + + I + +E+TE+ ME+ + ++ L + G+ +VDDFGTG+S LS L L Sbjct: 540 IIESRQIPTSLIELEVTETSFMENLNQAITSLRHLSEFGIQCAVDDFGTGYSSLSYLKQL 599 Query: 713 PVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRV 772 P+ +IKIDK FV + ++ ++ AI +G+SL L V+AEGVET Q L+ C + Sbjct: 600 PIRKIKIDKQFVRDLMKDEDDTQIVHAIIQLGKSLRLDVIAEGVETPRQERFLKHDGCTL 659 Query: 773 IQGYFFSRPLPAEEIPGWM 791 QGY++S+P+P +E+ +M Sbjct: 660 AQGYYYSKPVPPDELIEFM 678 >UniRef50_C1DD31 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DD31_LARHH Length = 910 Score = 266 bits (679), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 238/822 (28%), Positives = 368/822 (44%), Gaps = 76/822 (9%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNID-MLIP---RDLRPAH 69 F E G ++ ++ VM N + + G E V G ++ M +P R +R A Sbjct: 104 FRYCFEHLPFGLLVFDQTGRVMVCNRHFDTMMGLSEEAVHGLDLTAMPVPGFSRAVRQAL 163 Query: 70 PEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDA---- 125 + H G+ V G +R+L + FA + + +A++ DA Sbjct: 164 AGDVGHFF--GEIPVAGGTRQLGVRAV--------FAPLRTPSGQVPRGVAILEDALDNP 213 Query: 126 --SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDT 183 E+ + RQL + D I D + + NRA MFG+ EA G Sbjct: 214 RWQDELLAGRRRRQLFL--DQSVLAAIEWDDGFCVQEWNRAAERMFGFSREEAIGQHAFF 271 Query: 184 LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKI---WIKASISPVYDVLAHLQN 240 +L +R LQ L+ + + TR G I W ++ + + Sbjct: 272 ILPSEVRATLDREVLQSLMRQEGGWHSVNVNQTRDGALIQCEWFNTTLVDSNGKSLGVTS 331 Query: 241 LVMTFSDITEERQIRQLEGNILA-----------------------AMCSSPPFHEMGEI 277 LV+ DITE +Q R+ E + A + C + GE+ Sbjct: 332 LVL---DITE-KQAREDELRVAAQVYEQSREGILITDAQHRIVMLNSRCCELTGYTQGEV 387 Query: 278 ICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAP-AGILQI 336 + E + +ES VS P H E Q + +RQR+G L + Sbjct: 388 VGTTPEWMFSESQVS-------TPGFVELCRHLDE-QGGWAGELLLRQRNGQLFLAWLTL 439 Query: 337 KTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDD 396 +T ++ + D+S AA + I+ L FD +TGLPNR L + + Sbjct: 440 RTVRLGTSTYHVCMFGDLSDRQAA--------ERRIQYLAYFDTLTGLPNRALLTDRANM 491 Query: 397 LV-----DKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIE 451 + D A + + L+ +DH + + D+LG++ DQ L V R + ++ + R Sbjct: 492 ALRGVEGDAAPALALLLLDIDHFKHINDTLGHSTGDQLLQSVAKRLQATVREGDTVSRQG 551 Query: 452 GTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLL 509 G +FV++ + + S +A E+ + I + +++SIGI+ D G + L Sbjct: 552 GDEFVVLLPDANASRAASVAQEILRRLGFVCRIGEHDISVSVSIGIAMAPDDGTDFATLS 611 Query: 510 STAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAET 569 A AM ++ G N +FF P M E + L AL+ A+ +++L YQPQ+ +T Sbjct: 612 KCAEIAMYRAKQEGRNTLRFFFPEMQERTLRHVQLTGALRGAVERGEMQLHYQPQVDLQT 671 Query: 570 GELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHI 629 GEL G+EAL RW PL G V P FIPLAEE G I IG WV+ A RQLA+W + Sbjct: 672 GELSGVEALLRWTHPLFGAVSPGEFIPLAEESGLIIPIGDWVLRTAARQLADWLRDGLPP 731 Query: 630 PALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRD 689 ++VNLS L F L Q++ + G+ VE+TESM M I L Sbjct: 732 MVMAVNLSVLQFNLPGLAQQIASILSEAGVPPALFEVELTESMAMTEPEAAIATIDELHS 791 Query: 690 MGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNL 749 +GV +S+DDFGTG+S L+ L + +KID SFV ++ A+++AI + +SL L Sbjct: 792 VGVQVSLDDFGTGYSSLAYLKRFRLDRLKIDGSFVRDADSDPEDRAIVDAIVGMAESLGL 851 Query: 750 TVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 VAEGVET Q E++R + +QGY+ SRPLPA + W+ Sbjct: 852 ATVAEGVETSGQLEVIRALGGDAVQGYWISRPLPAAGLVAWL 893 >UniRef50_C5SBP4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SBP4_CHRVI Length = 648 Score = 266 bits (679), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 149/435 (34%), Positives = 243/435 (55%), Gaps = 12/435 (2%) Query: 367 KSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLG 422 ++ + ++ L D +TGLPNR + L+ + +A + + +D ++V D+LG Sbjct: 212 EASERLDYLAHHDALTGLPNRAYFQSRLEQCLQRAKRYQRRFALLFLDLDRFKEVNDTLG 271 Query: 423 YAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSN---ITQIADELRNVVS 479 + D L V +++ + R+ G +FV++ D+S I D + + S Sbjct: 272 HHVGDALLCRVAEILSAQIRDVDTIARLGGDEFVIIL--EDISEPRFIMHFVDRVMDDFS 329 Query: 480 KPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEM 537 +P+ ++ + F +T+S+GIS D G + + L+ A AM +K+G NG+ FF P M+ Sbjct: 330 RPLRLEGREFFVTVSVGISLYPDDGLDLETLVRRADIAMYQTKKSGRNGFSFFEPTMSAG 389 Query: 538 VKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPL 597 ERL L L+ A+ + +L YQPQ+ TGEL G+EAL RW P G + P FIP+ Sbjct: 390 AIERLHLEHDLRLAMQREEFELYYQPQVDLITGELMGVEALCRWRHPQLGVLLPGLFIPM 449 Query: 598 AEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAW 657 AE++G I+ +G ++ CRQ+ W + +++P L+VNLS QLP QV++ + Sbjct: 450 AEDLGLIDELGLRILELGCRQMVAWDASGLNVPRLAVNLSVRELERLQLPAQVAEILERT 509 Query: 658 GIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEI 717 G+D +L +E+TES +M H + LR +GV L++DDFGTG+S LS L LP+ + Sbjct: 510 GLDPRRLELEVTESKLMRHAEMAILALNALRALGVTLAIDDFGTGYSSLSYLKRLPLNRL 569 Query: 718 KIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYF 777 KID+SF++ + ++ AI ++ +L L V+AEG+E +EQ L C QGY Sbjct: 570 KIDRSFIEGLTHDVNDDSIARAIIALAHTLGLEVLAEGIEAREQANFLFGEGCLQGQGYL 629 Query: 778 FSRPLPAEEIPG-WM 791 +SRP+ AEE+ W+ Sbjct: 630 YSRPMIAEELAATWL 644 >UniRef50_Q1AVS2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVS2_RUBXD Length = 762 Score = 266 bits (679), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 148/431 (34%), Positives = 240/431 (55%), Gaps = 8/431 (1%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPV------VYLIGVDHIQDV 417 E+E+ ++ +EQ DP+TGL NR + L +A +P+ V ++ +D + V Sbjct: 316 ERERLQERLEQQALHDPLTGLANRALFSDRLAHAASRA-NPLDCGRLAVLMLDLDGFKSV 374 Query: 418 IDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLENDVSNITQIADELRN 476 DSLG+ D L+ V R R ++P + R+ G +F VL+ +DV ++A+ + + Sbjct: 375 NDSLGHEVGDALLVSVAGRIRACVRPSDTVARLGGDEFAVLIEEISDVGAAVRVAERILD 434 Query: 477 VVSKPIMIDDKPFPLTLSIGISYDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNE 536 + +P + S+G+++ + LL A AM ++ G ++ F P M Sbjct: 435 RLGEPYSVGGVGRVAAASVGVAFGPAREAKSLLRDADAAMYVAKERGKGRYEVFEPRMRN 494 Query: 537 MVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIP 596 E+L L A L+ A+ + + YQP + TGE+ +EAL RW P G V P+ F+ Sbjct: 495 ARAEKLRLEAELRAALERGEFAVHYQPIVSFATGEVVEVEALVRWERPGRGTVGPAEFLS 554 Query: 597 LAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHA 656 +AEE G I IGRWV+ EACRQ+ EW+ AL+VNLSA +L +V +A+ Sbjct: 555 VAEESGLIVPIGRWVLREACRQVREWQKGGSRELALAVNLSASQLHHPRLVREVEEALGL 614 Query: 657 WGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTE 716 G++ L +EITE +E E +R++ L +GV +++DDFG+G+S LS L + PV Sbjct: 615 SGLEARHLKLEITEQAAVEDAREAARRLEELSALGVRIALDDFGSGYSALSYLRTFPVDT 674 Query: 717 IKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGY 776 +KID+SF++ + + +++ A+ ++ +SLN+ V AEG ET+EQ LR + C + QGY Sbjct: 675 LKIDRSFIEGIGRDLQATSIVGAVIALAKSLNMCVTAEGTETEEQLAHLRSLGCDLAQGY 734 Query: 777 FFSRPLPAEEI 787 +FSRP EE+ Sbjct: 735 YFSRPASPEEV 745 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 266 bits (679), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 228/807 (28%), Positives = 391/807 (48%), Gaps = 77/807 (9%) Query: 28 INENDEVMFFNPAAEKLWGYKREEVIG---NNIDMLIPRDLRPAHPEYIRHNREGGKARV 84 +NE + + N AA G+ +EE++ +++D P D+ AH ++H Sbjct: 347 VNEQARICYANEAALHCHGFSKEELLSMTIHDLDPDFPPDVWLAHWHELQHK-------- 398 Query: 85 EGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDH 144 G++ E + ++DGS + + V K Y +A RD + +++++ + + Sbjct: 399 GGITIETRHRRRDGSIFPIEVSANFVKFGDKEYNIAYHRD----ITERKKSEAALRYSEQ 454 Query: 145 LDRPVIVLDPERHI-VQCNRAFTEMFGYCISEASGMQPDTLLN--IPEFPADNRIRLQQL 201 R V E + N +T + I E G P+ LL EF I + Sbjct: 455 RLRDVSEASGEYLWEIDINLGYTYVSNRSI-EVKGYTPEQLLGHAPAEFMPPEDIDMAAR 513 Query: 202 LWKTARDQDE-FLL----LTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQ 256 + A +++ F L +T +G +W + S P YD HL L T +IT R++++ Sbjct: 514 IVNLAISKNQPFKLQHRDITPSGAILWEEVSGVPFYDDAGHLLGLRGTGRNITG-RKLKE 572 Query: 257 LEGNILAAMCSSPPFHEM-------GEIICRNI----------ESVLNESHVSLFALRNG 299 + + AA + HE G II N E VL E+ L A RN Sbjct: 573 EQLRVAAAAFET---HEAIMITDAHGTIIKVNQAFQRITGYSQEEVLGENPRILSAGRNE 629 Query: 300 MPIHWASSSHGAEIQNAQSWSATI--RQRDGA--PA--GILQIKTSSGAETSAFIERVAD 353 + S+ ++ W I +++ G P I ++ +G +T+ ++ +D Sbjct: 630 KSFY---SAMWQQLTTLGRWRGEIWDKRKSGQIYPKWMTITAVRDENG-KTTEYVAIFSD 685 Query: 354 ISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNR----NNLHNYLDDLVDKAVSPVVYLI 409 I+Q A + I L +D +T LPNR + LH L V + Sbjct: 686 ITQRKLA--------EEEIRNLAFYDALTRLPNRRLLLDRLHAALSVSARSRRFGAVLFL 737 Query: 410 GVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDV----- 464 +D + + D++G+ + D L+EV R + ++ + R+ G +FV++ E D Sbjct: 738 DMDRFKTLNDTMGHDYGDLLLIEVAERIKLCVREIDTVARLGGDEFVILVEEIDTRAEET 797 Query: 465 -SNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLG--KNRDYLLSTAHNAMDYIRK 521 +I IA+++R+ +S P + +K + SIG+ G ++ D LL A AM + Sbjct: 798 SKHIAAIAEKIRSALSVPYRLKEKHHHSSPSIGVCLYRGIEESTDDLLKHADMAMYQAKD 857 Query: 522 NGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARW 581 +G N +FF P M + V+ R+ L L+ A+ N+QL+L YQ Q+ + + G EAL RW Sbjct: 858 SGRNAVRFFDPLMQQAVEARVTLENDLRHALPNDQLQLYYQIQVDNDRRAI-GAEALVRW 916 Query: 582 HDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIP-ALSVNLSALH 640 P+ G V P+ FIP+AEE I +G WV+ AC QLA W + + L+VN+S Sbjct: 917 IHPIRGMVSPAHFIPIAEETSLILEVGAWVLKTACLQLAVWADRPMTCNLILAVNVSVQQ 976 Query: 641 FRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFG 700 F+ +++ + A+ I +L +E+TES+++ ++I +++ L+ +GV LS+DDFG Sbjct: 977 FKQVGFVEHIAELIRAYCIVPQRLKLELTESVVLNDVSDIVQKMCALKSLGVRLSMDDFG 1036 Query: 701 TGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKE 760 TG+S LS L +LP+ ++KID+SFV T++ +++ I ++ Q+ L V+AEGVET+ Sbjct: 1037 TGYSSLSYLKNLPLDQLKIDQSFVRNIATDENDAVMVKTIIAMAQNFRLNVIAEGVETEA 1096 Query: 761 QFEMLRKIHCRVIQGYFFSRPLPAEEI 787 Q L++ C QGY+F +P P E+ Sbjct: 1097 QLAFLKQNGCMCYQGYYFGKPAPIEQF 1123 >UniRef50_C9YCS0 Uncharacterized signaling protein PA1727 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCS0_9BURK Length = 665 Score = 265 bits (678), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 156/418 (37%), Positives = 247/418 (59%), Gaps = 20/418 (4%) Query: 371 HIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPV--------VYLIGVDHIQDVIDSLG 422 ++Q+ +D +TGLPNR+ DLV + + ++ I +D + V DS+G Sbjct: 248 QLQQMAFYDQLTGLPNRS----LFIDLVQREMLSAQRNQQQFGIFFIDLDRFKAVNDSMG 303 Query: 423 YAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLENDVSNITQIADELRNVVSKP 481 +A D L+EV R RE L+ +CR G +F VLV ++ ++A + + P Sbjct: 304 HAAGDALLIEVARRLREVLREVDVVCRQSGDEFLVLVRDIEHWESLGEMAQRVLRSIEAP 363 Query: 482 IMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVK 539 +++ + P ++ SIGIS + G++ + L+ A A+ + G + +F +N ++ Sbjct: 364 VVLANAPVKVSASIGISLYPEDGQDFETLVKHADIAVYQAKTLGRARYSYFHSELNSRLQ 423 Query: 540 ERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAE 599 L L L AI ++QL L YQPQ+ A+TGE+ +EAL RW P G + P++FI LAE Sbjct: 424 ANLELEQELAYAIGHDQLVLHYQPQVCAKTGEMVAVEALVRWQHPTRGLLYPAQFIGLAE 483 Query: 600 EIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGI 659 E G I +G W + EACRQLA+W ++ IHI ++VN+SAL FR ++L + + A+ A GI Sbjct: 484 ESGRIAEMGVWTLREACRQLADWSARGIHIGNMAVNVSALEFRDHRLLDSLQAALDASGI 543 Query: 660 DGHQLTVEITESMMMEHDTEIFKRI-QILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIK 718 +L +EITES++M +TE +RI + LR +GVG+++DDFGTG+S L+ L L ++K Sbjct: 544 PPQRLEIEITESVLMA-ETETSQRIIERLRQIGVGIAIDDFGTGYSSLAYLKRLRPNQLK 602 Query: 719 IDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRK---IHCRVI 773 ID+SFV+ T+ A+++ + + ++L+L VVAEGVET+EQ R CRVI Sbjct: 603 IDRSFVNDTATDSDSRAIVKGVVGLAEALSLNVVAEGVETEEQRAFCRTSAVTPCRVI 660 >UniRef50_UPI0001926D08 PREDICTED: hypothetical protein n=1 Tax=Hydra magnipapillata RepID=UPI0001926D08 Length = 487 Score = 265 bits (677), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 156/418 (37%), Positives = 247/418 (59%), Gaps = 20/418 (4%) Query: 371 HIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPV--------VYLIGVDHIQDVIDSLG 422 ++Q+ +D +TGLPNR+ DLV + + ++ I +D + V DS+G Sbjct: 70 QLQQMAFYDQLTGLPNRS----LFIDLVQREMLSAQRNQQQFGIFFIDLDRFKAVNDSMG 125 Query: 423 YAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLENDVSNITQIADELRNVVSKP 481 +A D L+EV R RE L+ +CR G +F VLV ++ ++A + + P Sbjct: 126 HAAGDALLIEVARRLREVLREVDVVCRQSGDEFLVLVRDIEHWESLGEMAQRVLRSIEAP 185 Query: 482 IMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVK 539 +++ + P ++ SIGIS + G++ + L+ A A+ + G + +F +N ++ Sbjct: 186 VVLANAPVKVSASIGISLYPEDGQDFETLVKHADIAVYQAKTLGRARYSYFHSELNSRLQ 245 Query: 540 ERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAE 599 L L L AI ++QL L YQPQ+ A+TGE+ +EAL RW P G + P++FI LAE Sbjct: 246 ANLELEQELAYAIGHDQLVLHYQPQVCAKTGEMVAVEALVRWQHPTRGLLYPAQFIGLAE 305 Query: 600 EIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGI 659 E G I +G W + EACRQLA+W ++ IHI ++VN+SAL FR ++L + + A+ A GI Sbjct: 306 ESGRIAEMGVWTLREACRQLADWSARGIHIGNMAVNVSALEFRDHRLLDSLQAALDASGI 365 Query: 660 DGHQLTVEITESMMMEHDTEIFKRI-QILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIK 718 +L +EITES++M +TE +RI + LR +GVG+++DDFGTG+S L+ L L ++K Sbjct: 366 PPQRLEIEITESVLMA-ETETSQRIIERLRQIGVGIAIDDFGTGYSSLAYLKRLRPNQLK 424 Query: 719 IDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRK---IHCRVI 773 ID+SFV+ T+ A+++ + + ++L+L VVAEGVET+EQ R CRVI Sbjct: 425 IDRSFVNDTATDSDSRAIVKGVVGLAEALSLNVVAEGVETEEQRAFCRTSAVTPCRVI 482 >UniRef50_UPI0001C313CD diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C313CD Length = 763 Score = 265 bits (677), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 159/457 (34%), Positives = 248/457 (54%), Gaps = 16/457 (3%) Query: 346 AFIERVADISQHMAALALEQEKSRQHIEQLIQ---FDPMTGLPNRNNLHNYLDDLVDKA- 401 + ++ + I+ H L+ +Q +QL DP+TGLPNR L L + +D A Sbjct: 294 SLVQDESGIASHWVVQLLDVTSRKQFEQQLAHQAHHDPLTGLPNRALLTKRLQEALDLAR 353 Query: 402 ---VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV 458 V + +D+ + + DSLG+ D+ L V R R L+P+ L R G + V Sbjct: 354 EHDSGVAVIFVDLDNFKVINDSLGHDAGDRLLRNVSERLRRVLRPEDLLARFGGDELA-V 412 Query: 459 SLEN--DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY----DLGKNRDYLLSTA 512 LE D +IAD + + P ++D + +T S GI+ D ++ D LL A Sbjct: 413 CLERVADTEPANRIADRMATALRAPFVLDGEQRFVTASFGIALARPEDPDRSPDTLLRDA 472 Query: 513 HNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGEL 572 AM ++ G + F +M +RL L + L+EA++ NQL++VYQP++ E+G + Sbjct: 473 DAAMYRAKERGKARTEIFDASMRRRAVDRLELESGLREALARNQLRVVYQPEVSLESGRI 532 Query: 573 YGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIP-A 631 +EAL RW P HG + P+RFIP+AE+ G I IG WV+ EACRQ A W +++ Sbjct: 533 VAVEALLRWEHPQHGPISPARFIPIAEQSGLIVPIGAWVLREACRQAAHWNAESGGDGVV 592 Query: 632 LSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMG 691 ++VNLS ++ L V A+ + +L +EITES +M + +Q L+ +G Sbjct: 593 VAVNLSVRQLGASDLEATVRGAIDGARLPADRLCLEITESAVMADPAAAIESLQTLKRVG 652 Query: 692 VGLSVDDFGTGFSGLSRLVS-LPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLT 750 V L++DDFG G+S LS L LP+ +KID+SF+D + + A++ AI + +SL + Sbjct: 653 VKLAIDDFGVGYSSLSHLRELLPIDVLKIDRSFIDGVVLREEDRAIVTAIVQLARSLGVD 712 Query: 751 VVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 VAEGVET +Q LR +HC + QG+ F+RP P ++ Sbjct: 713 AVAEGVETSDQAAALRAMHCPIAQGFHFARPQPPADV 749 >UniRef50_A9BVR1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Comamonadaceae RepID=A9BVR1_DELAS Length = 828 Score = 265 bits (677), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 145/430 (33%), Positives = 248/430 (57%), Gaps = 7/430 (1%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVID 419 +Q ++Q IEQL D +TGLPNR NL +D ++ A + + I +D + + D Sbjct: 363 QQRVAQQRIEQLAYSDALTGLPNRLNLTERVDAAIEAARAGGTVFSILFIDLDRFKIIND 422 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVS 479 SLG+ + D+ L V R + ++P LCR+ G +FVL + +A + + Sbjct: 423 SLGHQFGDRVLKLVAQRLSDCMRPVDILCRLGGDEFVLYLQGCNAELAASVARRILQEME 482 Query: 480 KPIMIDDKPFPLTLSIGIS-YDL-GKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEM 537 +P ++D F + SIG++ Y G D L+ A AM +++ G + F+ P M+ Sbjct: 483 RPFLLDGLGFSVQCSIGVAQYPADGLTLDELIRQADTAMYRVKERGRGHFSFYQPQMSAG 542 Query: 538 VKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPL 597 + R+ L A+++A+ + ++ + +QPQ+ ++ + EAL RW DP G V P FIPL Sbjct: 543 LLSRMKLEHAMRQALEHGRMAVYFQPQVHIDSDRIVAAEALLRWTDPEFGVVSPGVFIPL 602 Query: 598 AEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAW 657 AEE G I +G WV+ +A ++ A W+ Q + I +SVN+SAL FR + +V++ + ++ Sbjct: 603 AEESGYIVTLGAWVMEQAVQEAARWQQQGMPIK-VSVNVSALEFRQSGFVERVTELLRSY 661 Query: 658 GIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEI 717 G+ L +E+TES++++ ++ R+ + D+GVG+ +DDFGTG+S L+ L LP+++I Sbjct: 662 GLTPQLLELELTESILLQDAQDMALRVCQIADLGVGMVIDDFGTGYSNLAYLKKLPISKI 721 Query: 718 KIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYF 777 KID+SFV +++ A++ AI S+G +L + +VAEGVET EQ + ++ QG+ Sbjct: 722 KIDQSFVRGLPSDEGDQAIVGAIISLGLALGVEIVAEGVETHEQLTAIHRMQGHYFQGFL 781 Query: 778 FSRPLPAEEI 787 + LP E+ Sbjct: 782 CAPGLPREQF 791 >UniRef50_A4ACX6 Sensory box/GGDEF/EAL family protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4ACX6_9GAMM Length = 793 Score = 265 bits (677), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 151/476 (31%), Positives = 267/476 (56%), Gaps = 35/476 (7%) Query: 322 TIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPM 381 TI + DG G + I T DISQ +++ + +++L +DP+ Sbjct: 331 TISKIDGPDGGFMAIFT--------------DISQ--------LKETEEQLQKLAHYDPL 368 Query: 382 TGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRF 437 T LPNR ++ L+ + +A V+ + +D +++ DSLG+ D+ L NR Sbjct: 369 TNLPNRFLVNECLEHSIRRAQRRSDHLAVFFLDIDSFKNINDSLGHFAGDKLLKTTANRL 428 Query: 438 REKLKPDQYLCRIEGTQFVLVSLENDVS---NITQIADELRNVVSKPIMIDDKPFPLTLS 494 + L+ D + RI G +F++V +D+S + T IA+++ + KP++++ + ++ S Sbjct: 429 KALLRDDDSVGRIGGDEFLMVL--DDISTPDDATHIAEKIIGALRKPMILEGRSISVSAS 486 Query: 495 IGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAI 552 IGIS + G+ + L+S A AM + G + ++F+S + + +++ +AL+EA+ Sbjct: 487 IGISIYPEDGQTAETLMSNADAAMYNAKDQGRDTFRFYSEHLTRQAFQNVLIDSALREAV 546 Query: 553 SNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVI 612 S + +L +QPQ+ + G L G+E L RWH G V PS+FIP AE G I +IG WV+ Sbjct: 547 SRQEFRLAFQPQVNTDNGSLLGLEVLLRWHHLTLGTVSPSQFIPQAERTGLIRDIGHWVL 606 Query: 613 AEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESM 672 ++C Q + W ++ + L+VN+SA FR+ QV + +L +E+TES+ Sbjct: 607 EQSCLQGSRWIAEGLQFGHLAVNVSAPQFRAEDFVAQVRKVLADTEFPPEKLELELTESV 666 Query: 673 MMEHDTE-IFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEK 731 ++ HDTE + + + LR +GV ++DDFGTG+S LS L +P+ +K+DKSFVD +++ Sbjct: 667 LV-HDTEKLIENMHELRALGVMFAIDDFGTGYSSLSYLKRMPIDRLKLDKSFVDHIVSDD 725 Query: 732 RILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 + A+ ++G+++ L V+AEG+E + Q +L+ + C+ QGY + RP+ I Sbjct: 726 SDRIIAGAVLALGKAMGLPVIAEGIEQEAQARVLQSLGCKHFQGYLYGRPMYGPRI 781 Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust. Identities = 51/199 (25%), Positives = 83/199 (41%), Gaps = 22/199 (11%) Query: 14 FFPALEQNMMGAVLINEND-EVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEY 72 ++ A Q G L+ D E+ N A + + G+ E+ G N+ L+ HPE Sbjct: 124 YYDAFFQQPNGMHLVASIDGEIRLTNSAWQLVLGHGDAELQGQNLLDLV-------HPE- 175 Query: 73 IRHNREGGKARVEGMSR-------ELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDA 125 +RE A + +S+ E + +DGS + A S +AE + A+ RD Sbjct: 176 ---DREATLAEMGKLSQGMYTLYFENRYRHRDGS--YRVIAWSAATAERESVICAVGRDI 230 Query: 126 SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 S E A + Q + +++ D + I N AF+ + GY +A G QP +LL Sbjct: 231 SQEHAARRGLFQAAAVFKNSGEGILISDKDGRIRDVNAAFSRITGYSREDAIG-QPTSLL 289 Query: 186 NIPEFPADNRIRLQQLLWK 204 D + Q L + Sbjct: 290 RSGRHDGDFYADMWQTLQR 308 >UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H2G8_METFK Length = 633 Score = 265 bits (677), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 152/421 (36%), Positives = 233/421 (55%), Gaps = 10/421 (2%) Query: 375 LIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQAL 430 L +D +T LPNR+ + L++ A + + +D + + D+LG+ D+ L Sbjct: 196 LANYDTVTDLPNRHAFSRHFHLLLEGARHRRGVLALLVFDLDDFKVINDTLGHDVGDKLL 255 Query: 431 LEVVNRFREKLKPDQYLCRIEGTQF-VLVSLENDVSNITQIADELRNVVSKPIMIDDKPF 489 V R + R+ G +F +++ DV N+ +A+ ++ PI+++D+ F Sbjct: 256 HLVAQRLMVAAGKKNTVYRVGGDEFAMMLDQPADVENVEAVANRFIRALAPPIVLNDRNF 315 Query: 490 PLTLSIGIS---YDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGA 546 + +SIG S YD G++ +LL A AM Y + G N +Q FS M+ RL+L Sbjct: 316 YIGVSIGASIYPYD-GEDAAHLLRDADAAMYYAKSRGKNNFQMFSAEMHHKSSTRLLLET 374 Query: 547 ALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIEN 606 L+ A+ Q +L YQPQ +L G+EAL RWH P G + PS FIP+AEE G I Sbjct: 375 ELRVALEEKQFELYYQPQFSLPDCKLVGVEALIRWHHPQRGLLCPSSFIPVAEETGLIVR 434 Query: 607 IGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTV 666 IG WV+ EACRQ EW++ + + +SVNLS FR L ++ + G+D L + Sbjct: 435 IGEWVLREACRQAMEWKALGVPL-RMSVNLSGRQFRQENLVQTMTKIIERTGMDSSLLEL 493 Query: 667 EITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDR 726 EITE+++ME R+ L+ MG+ L++DDFGTG+S ++ L PV+ +KID+SF+ Sbjct: 494 EITETVLMEDAEATTTRLADLKAMGMHLAIDDFGTGYSSMAYLKRFPVSRLKIDRSFIRD 553 Query: 727 CLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEE 786 + +A+ A + SL L VVAEGVETK Q + LR+ ++QGY FSRP+ A E Sbjct: 554 IPNDPDDVAITTATIQMAHSLKLEVVAEGVETKAQLQFLREQGSDMVQGYLFSRPVSARE 613 Query: 787 I 787 + Sbjct: 614 M 614 >UniRef50_A1VBK7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Desulfovibrio vulgaris RepID=A1VBK7_DESVV Length = 1413 Score = 265 bits (677), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 174/499 (34%), Positives = 259/499 (51%), Gaps = 21/499 (4%) Query: 316 AQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMA---ALALEQEKSRQHI 372 A W T + G G + ++ S + AF + A + +A A+A+E++++ + + Sbjct: 908 ASVWLGTPLRVRGKVIGAMVLQHYS--DPDAFSDSDARLMTSLADQIAVAIERKQNEEQL 965 Query: 373 EQLIQFDPMTGLPNRNNL-----HNYLDDLVDKAVSPVVYLIGVDHIQDVIDSLGYAWAD 427 L D +TGLPNR L L L K S V +I +D + + DS G+A D Sbjct: 966 TYLALHDSLTGLPNRTLLLERIEQARLRSLRGKGRSFAVMMIDLDRFKIINDSHGHAVGD 1025 Query: 428 QALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSN---ITQIADELRNVVSKPIMI 484 + L V R L+P + R+ G +F + L DV+ + +A + V +P + Sbjct: 1026 RLLQMVSAAVRPVLRPADTVARLGGDEFAI--LLEDVATPREVVHVARRVIKAVERPARV 1083 Query: 485 DDKPFPLTLSIGI--SYDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERL 542 +K + S+GI D + D LL A AM ++ G ++ F+ M++ + + Sbjct: 1084 ANKLLRTSASVGIVLRTDGYGSADELLRDADIAMYQAKEQGRGRFRVFNRTMHQQAMDAM 1143 Query: 543 VLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIG 602 L L A+ Q +L YQP + L G EAL RW PL G +PP+ FIP+AEE G Sbjct: 1144 NLENDLGAALRWGQFELDYQPVFDTRSRALLGFEALVRWRHPLRGLIPPTAFIPVAEETG 1203 Query: 603 EIENIGRWVIAEACRQLAEWRSQNIHIPAL--SVNLSALHFRSNQLPNQVSDAMHAWGID 660 I +G WV+ A LA WR Q I L +VN+SAL F LP V DA+ G+ Sbjct: 1204 IITRLGHWVLETALTALARWRLQIPGIDDLYVAVNMSALQFAQPTLPGSVRDALQKTGLP 1263 Query: 661 GHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKID 720 L VEITE+ +M+ T +RI LRD+GVG+ +DDFGTG+S L+ L PV +K+D Sbjct: 1264 ASCLKVEITETAIMQDPTTALQRISALRDLGVGIGIDDFGTGYSSLAYLQRFPVDTLKVD 1323 Query: 721 KSFVDRCLTE--KRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFF 778 +SFV + T + ++ A+ + SL+L VVAEGVET+EQF L + C +QGY Sbjct: 1324 RSFVSQSTTPEGEGNREIVRAVVVLAHSLSLAVVAEGVETEEQFAFLAGLGCDAVQGYLL 1383 Query: 779 SRPLPAEEIPGWMSSVLPL 797 SRP+P +IP +S+ L Sbjct: 1384 SRPVPEADIPAHISTTWAL 1402 >UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Variovorax paradoxus S110 RepID=C5CTK8_VARPS Length = 1107 Score = 265 bits (676), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 147/450 (32%), Positives = 251/450 (55%), Gaps = 13/450 (2%) Query: 355 SQHMAALALEQEKSRQHIEQLIQF----DPMTGLPNRNNLHNYLDDLVDKA----VSPVV 406 S + AL + Q K R+ E+ ++F D +TGL NR L + L + ++ V Sbjct: 646 SLRVIALQIAQYKQRKQAERSLRFMASHDGLTGLFNRAALQHELARAIKRSNRHQKQFAV 705 Query: 407 YLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN--DV 464 + +D + + D+LG+ D+ + R L+ + R G +FVL+ LEN Sbjct: 706 IFVDLDRFKHINDTLGHGVGDEMIKICGERLTALLREADVVARFGGDEFVLL-LENLSSA 764 Query: 465 SNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKN 522 ++ +A+++ ++P + + ++ S+G+S D G + + LL A AM ++ Sbjct: 765 NDAAGLAEKVLACCAEPFFLAGRELHVSASVGVSIYPDNGADAEALLKNADTAMYRAKER 824 Query: 523 GGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWH 582 G N ++F++ MN E+L+L +AL+ A+ +L++ YQP++ +T + G+EAL RWH Sbjct: 825 GRNTFRFYAAKMNAQNTEQLMLESALRHALERGELEMHYQPKMDLQTQRIVGVEALMRWH 884 Query: 583 DPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFR 642 P+ G +PP +FIP+AEE+G I ++G+W + AC W+ + +SVNLS F Sbjct: 885 HPILGMIPPVQFIPIAEELGLIVSLGKWALERACADSRSWQKYGLPKVLMSVNLSPRQFE 944 Query: 643 SNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTG 702 S L + + A G++ L +EITE +M + K ++ +RDMGVGL++DDFGTG Sbjct: 945 SRTLIADIQAVLEASGLEPSLLELEITEGAVMANPEHAAKLLRAIRDMGVGLAIDDFGTG 1004 Query: 703 FSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQF 762 +S LS L P++ +KID+SF++ + AL++ I ++ L + VVAEG+ET Q Sbjct: 1005 YSSLSYLKHFPLSTVKIDRSFINDLSQDADARALIDGIITLAHGLRMKVVAEGIETTAQL 1064 Query: 763 EMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 + LR C QGY+ +P+PA+E+ +M+ Sbjct: 1065 DYLRSHGCDEAQGYWLCKPVPADEVRNFMA 1094 >UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ51_9DELT Length = 751 Score = 265 bits (676), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 173/456 (37%), Positives = 252/456 (55%), Gaps = 19/456 (4%) Query: 342 AETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA 401 +TS ++ D+SQ L+Q +++ +E L +DP+T LPNR LH+ L+ ++ A Sbjct: 301 GQTSYYVGVFTDLSQ------LKQSEAK--LESLAYYDPLTALPNRLLLHSRLEHALEWA 352 Query: 402 ----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVL 457 VY I +D + V +SL Y DQ L+ V RF L+ D L R G +FVL Sbjct: 353 ERHQTKVGVYFIDLDQFRVVNESLSYQAGDQLLVMVSKRFLSCLRVDDTLARPGGDEFVL 412 Query: 458 VSLE-NDVSNITQIADELRNVVSKPIMIDD-KPFPLTLSIGISYDLGKNRDY--LLSTAH 513 + D T+ A EL + +P +D + L SIGI+ G LL A Sbjct: 413 IQEALADPQEATETARELLASLDQPFQLDGGQEIYLGASIGITVFPGDGTTPPDLLKNAE 472 Query: 514 NAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQI-FAETGEL 572 AM + ++NG N + F++ MN RL + AL++A+ N +L L YQPQ A++ + Sbjct: 473 AAMYHAKENGRNRFSFYAEQMNADALARLQMEMALRQAVENRELLLYYQPQWQLADSPSV 532 Query: 573 YGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPAL 632 G EAL RW + + P +FIPLAE+ G I IG WVI EACRQL WR Q + Sbjct: 533 IGAEALIRWRNKEGELIAPDQFIPLAEKSGLIGAIGDWVIDEACRQLRIWRDQGKKQLRV 592 Query: 633 SVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGV 692 +VN+SA FR+ L V+ A+ I H +E+TES++ME E + + +GV Sbjct: 593 AVNVSARQFRAGNLAEVVAQALRKHEIPAHCFELELTESILMEKPEEAAELLNRCAALGV 652 Query: 693 GLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALL-EAITSIGQSLNLTV 751 G+++DDFGTG+S L+ L P+T +KID+SFV R L + AL+ ++I ++ + L V Sbjct: 653 GIALDDFGTGYSSLAYLSRFPITVLKIDRSFV-RDLNHRSEAALIADSIIALAHRMGLQV 711 Query: 752 VAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 VAEGVET+EQ L+ C + QG+ FS PLPAE+ Sbjct: 712 VAEGVETEEQRAYLQSRGCDLAQGFLFSPPLPAEQF 747 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 265 bits (676), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 155/435 (35%), Positives = 240/435 (55%), Gaps = 15/435 (3%) Query: 372 IEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPV--------VYLIGVDHIQDVIDSLGY 423 + L Q D +T LPNR LDD + +A+S V + +D + + DSLG+ Sbjct: 330 MAHLAQHDFLTDLPNRR----VLDDRLRQAISLARRQGKQLAVLFVDIDRFKHINDSLGH 385 Query: 424 AWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQI-ADELRNVVSKPI 482 D+AL + R ++ + R G +FV++ E ++ I A ++ + V+ P Sbjct: 386 GMGDKALQSMAERLTTCVRASDTVARQGGDEFVILLAEVTTADDAAIVAKKILSAVALPH 445 Query: 483 MIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKE 540 I ++ SIGIS + + + L+ A AM ++ G N +QFF MNE V + Sbjct: 446 RIGRHELQISASIGISTCPNDADDAETLIKHADIAMYQAKEKGRNNYQFFRADMNERVLQ 505 Query: 541 RLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEE 600 R L ++L+ A+ + L YQP++ ETG + G+EAL RW P G VPP+ FI +AE+ Sbjct: 506 RQSLESSLRLALERQEFLLHYQPKMNLETGHITGMEALIRWRHPELGLVPPASFIGVAED 565 Query: 601 IGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGID 660 G ++ IGRWV+ EACRQ+ EW ++ ++VN+SA+ FR + V + +D Sbjct: 566 CGLMQPIGRWVLQEACRQVKEWMVAGLNPVPVAVNVSAVEFRRKHFFDGVISTLRETDLD 625 Query: 661 GHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKID 720 L +E+TE+++M+ + L+ GV L++DDFGTG+S LS L LPV +KID Sbjct: 626 PRYLELELTETVLMKEAEPTIAVLHALKSAGVKLAIDDFGTGYSSLSYLTRLPVDTLKID 685 Query: 721 KSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSR 780 +SFV T A++ AI +G+SLNL V+AEGVET+EQ +LR C QGY+FSR Sbjct: 686 RSFVTDVTTRTDNAAIVSAIIGMGKSLNLNVIAEGVETQEQLALLRSHCCAEGQGYYFSR 745 Query: 781 PLPAEEIPGWMSSVL 795 P+ + +++ L Sbjct: 746 PVSVPAVAELLNTEL 760 >UniRef50_C7R6X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6X9_KANKD Length = 855 Score = 265 bits (676), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 149/423 (35%), Positives = 233/423 (55%), Gaps = 13/423 (3%) Query: 375 LIQFDPMTGLPNRNNLHNYL-------DDLVDKAVSPVVYLIGVDHIQDVIDSLGYAWAD 427 L +DP+T LPNR L + D+L + + I +D + + ++L Y D Sbjct: 429 LSHYDPLTHLPNRQKLEERIEESIERSDELKE---CFAILSIDIDRFKKINETLSYQVGD 485 Query: 428 QALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN-DVSNITQIADELRNVVSKPIMIDD 486 + + R + L D L R+ G FV V + DV ++ IA ++ + P+ ID+ Sbjct: 486 AVIARIAERLKHILNVDDVLARVGGDDFVFVINDKVDVKKVSSIARKVLKRFAVPLRIDE 545 Query: 487 KPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVL 544 +T SIGI+ + G++ D LL A A + G N ++FF+ ++E + E L+L Sbjct: 546 HELMVTASIGIAMFPEDGRDPDTLLKNAEIARYSAKDKGRNSFEFFNDQLSEGMHENLML 605 Query: 545 GAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEI 604 +AL+ A+ N+L L YQP + + G+EAL RW P+ G +PP +FIPLAEE G I Sbjct: 606 ESALRMAVERNELVLHYQPLVSFNDFTVVGVEALIRWQHPIQGLIPPYKFIPLAEETGII 665 Query: 605 ENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQL 664 +IG WV+ EACRQ+ EW +++ SVN+S + LP QV + G+ +L Sbjct: 666 GDIGLWVLREACRQMVEWDKAGLNVARASVNISVQQIETGLLPKQVESVLKETGLAAERL 725 Query: 665 TVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFV 724 +E+TES +M+ + + + MGV L+VDDFGTG+S ++ L LP+ +KID+SF+ Sbjct: 726 YLELTESTIMQDPQQASLAMTEFQKMGVKLAVDDFGTGYSSMAYLKRLPLDRLKIDRSFI 785 Query: 725 DRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPA 784 + + +AI + +SL L VAEGVE + Q E L+ + C V QGY +S+P+PA Sbjct: 786 KDIGADTNDEVICKAIVQLAKSLGLETVAEGVEEESQAEFLKGLGCDVAQGYLYSKPVPA 845 Query: 785 EEI 787 E+ Sbjct: 846 LEL 848 >UniRef50_Q3IEZ9 Putative uncharacterized protein n=2 Tax=Pseudoalteromonas RepID=Q3IEZ9_PSEHT Length = 842 Score = 264 bits (675), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 149/425 (35%), Positives = 235/425 (55%), Gaps = 6/425 (1%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVID 419 E++ + I QL FD +TGLPNR ++ L + A V I +D ++V D Sbjct: 395 ERKNAEDKIVQLAYFDELTGLPNRRLFNDRLKMALAAAHRDQHLLAVMFIDLDRFKEVND 454 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVS 479 SLG++ D L V R L L R+ G +FV++ N + + +AD++ N ++ Sbjct: 455 SLGHSAGDCLLTLVAARIEATLNEGDTLARLGGDEFVVLCEINKIDAVASLADKILNNLN 514 Query: 480 KPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEM 537 P +D +T SIG + D G + + LL A AM + G N +Q F P+MN Sbjct: 515 SPFQLDHVEVGVTASIGAAVYPDDGLDSETLLKHADIAMYRSKDVGRNSFQLFKPSMNAR 574 Query: 538 VKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPL 597 ERL + + + A+ NN+ +L +QP+ ++ ++ G+EAL RWHDP G + P++FIPL Sbjct: 575 SLERLAMMSRFQHALDNNEFELYFQPKQCLKSEQIMGVEALLRWHDPDLGMISPAQFIPL 634 Query: 598 AEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAW 657 AEE+G I + WVI +A + L W+ + + L++N+SA H +L N + + + Sbjct: 635 AEELGLIVRLDLWVINQAGKVLTLWQKEGLVAGRLAINISACHLSQGKLANNIGTMLKHY 694 Query: 658 GIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEI 717 + G L +E+TES + T+ ++Q L+ +GV +++DDFGTG+S LS L LP + Sbjct: 695 NLPGSLLEIELTESSFISSFTQAKTQLQQLKKLGVHIALDDFGTGYSALSYLTKLPFDTL 754 Query: 718 KIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYF 777 KID SF+ + E ++ A+ ++ +LNL VVAEGVE Q L + C VIQGY+ Sbjct: 755 KIDASFIAKIPDEYGNSQIVAALIALASNLNLMVVAEGVEQPAQKNYLISLGCNVIQGYY 814 Query: 778 FSRPL 782 + RPL Sbjct: 815 YCRPL 819 >UniRef50_Q21DZ3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21DZ3_SACD2 Length = 682 Score = 264 bits (675), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 152/449 (33%), Positives = 250/449 (55%), Gaps = 7/449 (1%) Query: 349 ERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP---- 404 +R A + + ++ LE EK + D +TGLPNR L+ ++ A Sbjct: 219 QRDAMLEKQVSHRTLELEKLAEEFRFRAFHDNLTGLPNRALLNERFGLCIEHARRCGNKF 278 Query: 405 VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDV 464 V L+ +D + + D+ G+ + D+ L+ V R + ++ + +CR+ G +F++++ + + Sbjct: 279 VCLLLDLDDFKTINDTKGHDYGDELLIGVAQRLKASVRAEDLVCRLGGDEFIILATDIET 338 Query: 465 S-NITQIADELRNVVSKPIMIDDKPFPLTLSIG--ISYDLGKNRDYLLSTAHNAMDYIRK 521 + QIA+ + +S+ I+I D +SIG I G+ L A AM + + Sbjct: 339 EFDARQIANNILFALSEDIVIKDDKIKTAVSIGGAIYPQHGETVGVLKRHADVAMYHAKD 398 Query: 522 NGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARW 581 G N + FS M E V RL++ L+ AI +NQL + +QP++ AETGE+ G EAL RW Sbjct: 399 GGKNRFSLFSHGMQEEVHYRLMIQRDLEPAILDNQLIIYFQPKVLAETGEVAGCEALVRW 458 Query: 582 HDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHF 641 P G + P +FIP AEE I I +VI E C++L EW ++ ++VNLS HF Sbjct: 459 QHPEEGFLTPDKFIPYAEETPLIREIDYYVIRECCKKLKEWAARFDKPVPIAVNLSGRHF 518 Query: 642 RSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGT 701 RS ++ + +A+ + GI L +EITE++++ + K + ++ +G +S+DDFGT Sbjct: 519 RSFKIVEVLKEAVASAGISPDLLEIEITEAVLIADPDKAQKVVHAIKSIGFTISLDDFGT 578 Query: 702 GFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQ 761 G+S L+ L +LP+ IK+D+SF+ T ++ L ITS+ + L+LT+VAEGVET+ Q Sbjct: 579 GYSSLNYLRTLPIDIIKLDRSFIANIDTSEQDRRLTRGITSLAKGLDLTMVAEGVETESQ 638 Query: 762 FEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 + L + C QGY+FS+P+P E W Sbjct: 639 LQTLLDLGCHCFQGYYFSKPVPETEFLAW 667 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 264 bits (675), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 157/489 (32%), Positives = 251/489 (51%), Gaps = 21/489 (4%) Query: 311 AEIQNAQSWSATI--RQRDGA----PAGILQIKTSSGAETSAFIERVADISQHMAALALE 364 A + W I R++D + A I +K + G T+ ++ DI+ E Sbjct: 459 AHLTRGDIWHGEIINRRKDKSIYIESATITPVKQADGKITN-YVAIKEDIT--------E 509 Query: 365 QEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDS 420 ++K+ + E L FD +TGLPNR L + ++ A S V + +D+ +++ DS Sbjct: 510 KKKAEAYTENLAYFDQLTGLPNRRMLQAQVKYRLNMAQSNHQPLTVMFLDLDNFKNINDS 569 Query: 421 LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSK 480 LG+ DQ L+++ R ++ ++ + R+ G +F+++ D + IA L +SK Sbjct: 570 LGHTVGDQVLIKIAKRIKKAIREVDTVSRLGGDEFIMLFPNTDANAAMHIATTLIQEISK 629 Query: 481 PIMIDDKPFPLTLSIGISYDLGKNRDY--LLSTAHNAMDYIRKNGGNGWQFFSPAMNEMV 538 +++ +T SIGI+ D+ LL A AM ++ + NG+ F +P M Sbjct: 630 ASVVEHNELTITPSIGIAIYPNDGNDFKTLLKNAETAMYRVKNDSRNGFHFVTPEMQLSA 689 Query: 539 KERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLA 598 L L AL+ A+ N+L+L YQPQI G++ G EAL RWH P G + P+ FIP+A Sbjct: 690 SRNLQLENALRHALKRNELQLYYQPQISTSNGQIIGAEALLRWHHPELGMISPAEFIPIA 749 Query: 599 EEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWG 658 E G+I IG WV+ A RQ W ++VNLS + FR L ++D + Sbjct: 750 ESSGQIIEIGEWVLRTAIRQTKNWMDDGFTPMIIAVNLSVVQFRQKNLLTLITDILAEVQ 809 Query: 659 IDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIK 718 + L +E+TE++ M + + + G+ +S+DDFGTG+S LS L V ++K Sbjct: 810 LPNEYLELELTEAVTMHDPESVINVMNTFHEQGIRMSIDDFGTGYSSLSYLKKFKVYKLK 869 Query: 719 IDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFF 778 ID+SF+ + A++ AI + +L L +AEGVET EQ LR C +QGY+F Sbjct: 870 IDQSFIRDISNDPDDRAIVSAIIDMASNLGLQTIAEGVETAEQLAFLRLHGCHEVQGYYF 929 Query: 779 SRPLPAEEI 787 S+PLP+ E Sbjct: 930 SKPLPSVEF 938 >UniRef50_D2M2P9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M2P9_BACS4 Length = 696 Score = 264 bits (675), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 145/431 (33%), Positives = 238/431 (55%), Gaps = 7/431 (1%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVID 419 E +++Q I + D +T LPNR L+ + A + V I +D + + D Sbjct: 256 EMREAQQKIHHMAYHDYLTDLPNRRYFEEQLEAELQDAKTNRSKLAVLFIDIDRFKFIND 315 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLENDVSNITQIADELRNVV 478 +LG+ D+AL E+ + + R+ G +F +LV + + ++AD + + Sbjct: 316 TLGHHVGDKALKEIAEMLVSLVSEKDLIARMAGDEFMILVPHIEALDYVKELADSILKRM 375 Query: 479 SKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNE 536 PI+ D +T SIGIS + G++ +L A AM ++ N ++FF+P M E Sbjct: 376 ESPIVFDHYELFVTGSIGISTYPESGEDISVILKNADLAMYKAKETKENSFEFFTPEMEE 435 Query: 537 MVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIP 596 + L L+ AI+NN+ +L YQP++ A T ++ G+EAL RW+ P G V P FIP Sbjct: 436 NSYKNFALQNDLRRAITNNEFELYYQPKVSASTEKVVGVEALIRWNHPTLGMVSPGHFIP 495 Query: 597 LAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHA 656 +AE+ G I IG WV C+Q+ W + +S+N SA+ L +V + + Sbjct: 496 IAEDTGLIVPIGEWVFDAVCKQVKRWENTGFPPLVVSLNFSAIQMLQKGLVTKVKNLLEK 555 Query: 657 WGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTE 716 ++GH + VE+TES+++EHD +I +++ L+ +G+ +++DDFGTG+S LS L Sbjct: 556 NQVEGHWIEVEMTESLILEHDNDILNKLEGLKQLGIHIAIDDFGTGYSSLSYLKKYKFNT 615 Query: 717 IKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGY 776 IK+DKSF++ T A++ I + LN+ VVAEGVE KEQ ++L+K++C +QG+ Sbjct: 616 IKLDKSFINDIHTSADNQAIITFIIQLSNQLNMKVVAEGVEIKEQHDILQKLNCDELQGF 675 Query: 777 FFSRPLPAEEI 787 +FSRP P +E Sbjct: 676 YFSRPKPVKEF 686 >UniRef50_Q55434 Phytochrome-like protein cph2 n=1 Tax=Synechocystis sp. PCC 6803 RepID=PHY2_SYNY3 Length = 1276 Score = 264 bits (675), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 157/455 (34%), Positives = 252/455 (55%), Gaps = 15/455 (3%) Query: 350 RVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPN-----RNNLHNYLDDLVDKAVSP 404 ++A ++ +A+ Q+ + I Q +DP+T LPN R LD L + + Sbjct: 405 KLAQVASTQLYMAITQQFVTRLITQQTAYDPLTQLPNWIIFNRQLTLALLDALYEGKMVG 464 Query: 405 VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKP----DQYLCRIEGTQF-VLVS 459 V+ +I +D + + +S G+ D L EV +R +KL P L R G F +L++ Sbjct: 465 VL-VIAMDRFKRINESFGHKTGDGLLQEVADRLNQKLSPLAAYSPLLSRWHGDGFTILLT 523 Query: 460 LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGIS---YDLGKNRDYLLSTAHNAM 516 +D + + + L + +P + +P LT S+GIS YD G+ + LL A A+ Sbjct: 524 QISDNQEMIPLCERLLSTFQEPFFLQGQPIYLTASMGISTAPYD-GETAESLLKFAEIAL 582 Query: 517 DYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIE 576 + G N +QF+ P + + +RL L + L++A++N + L +QPQ+ +TG+L G+E Sbjct: 583 TRAKCQGKNTYQFYRPQDSAPMLDRLTLESDLRQALTNQEFVLYFQPQVALDTGKLLGVE 642 Query: 577 ALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNL 636 AL RW P G V P FIPLAEE+G I ++G+WV+ AC + + ++VN+ Sbjct: 643 ALVRWQHPRLGQVAPDVFIPLAEELGLINHLGQWVLETACATHQHFFRETGRRLRMAVNI 702 Query: 637 SALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSV 696 SA F+ + N V + + G+ L +EITES+MME + LR+ GV +++ Sbjct: 703 SARQFQDEKWLNSVLECLKRTGMPPEDLELEITESLMMEDIKGTVVLLHRLREEGVQVAI 762 Query: 697 DDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGV 756 DDFGTG+S LS L LP+ +KIDKSFV+ L E A+++ + + LNL VAEG+ Sbjct: 763 DDFGTGYSSLSILKQLPIHRLKIDKSFVNDLLNEGADTAIIQYVIDLANGLNLETVAEGI 822 Query: 757 ETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 E++ Q + L+K+ C + QGYF +RPLPAE + ++ Sbjct: 823 ESEAQLQRLQKMGCHLGQGYFLTRPLPAEAMMTYL 857 >UniRef50_Q7MI32 C-di-GMP phosphodiesterase A-related protein n=40 Tax=Vibrio RepID=Q7MI32_VIBVY Length = 687 Score = 264 bits (675), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 148/430 (34%), Positives = 241/430 (56%), Gaps = 12/430 (2%) Query: 368 SRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGY 423 + + QL FD +TGL NR+ L L++ + ++ S V++ + +D + + DSLG+ Sbjct: 234 AESQLNQLAYFDTLTGLANRSLLLKSLNETLKESQSEQYPGVLFYLDLDRFKTINDSLGH 293 Query: 424 AWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIM 483 D + + R L+P + RI G +F ++ + + + A +L ++S P Sbjct: 294 TIGDNLMRTIAKRLEAWLQPGEIAARIGGDEFAILIPKLNKEDAANKAKQLLTLISNPYS 353 Query: 484 IDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKER 541 IDD T+SIGIS D G + +L A A+ + G N + F+ P M V+ Sbjct: 354 IDDHQLYCTVSIGISTFADKGISSIDVLRQADTALYRAKVAGRNKYMFYEPEMQAQVESF 413 Query: 542 LVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEI 601 L + L EA+ QL+L YQPQ+ A+ ++ G+EAL RW+ P G +PP F+P+AEE Sbjct: 414 LEIEKGLHEALHKGQLELYYQPQVNAQQ-QIIGVEALIRWNHPEKGVLPPGVFMPIAEET 472 Query: 602 GEIENIGRWVIAEACRQLAEWRSQNIHIPA----LSVNLSALHFRSNQLPNQVSDAMHAW 657 G+I IG W+I +AC Q A+W+ + + +P L++N+S L F N ++ A+ Sbjct: 473 GQILQIGDWIIEQACFQYAQWKKEQV-LPETFHRLAINISPLQFSKNAFVEHITHALKQA 531 Query: 658 GIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEI 717 I G + +EITES+++E+ ++ L+++ + +S+DDFGTG+S L L L V + Sbjct: 532 NITGEHIELEITESLLLENVESAINKMAELKELDLKISIDDFGTGYSSLRYLKHLAVDVL 591 Query: 718 KIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYF 777 KID+SFV + ++ A++ I I + L+L V+AEGVET+E+F L ++ C QGY Sbjct: 592 KIDRSFVTQLHLDQSDQAIVSTIIMIAERLSLEVIAEGVETEEEFNTLVELGCEQFQGYL 651 Query: 778 FSRPLPAEEI 787 F +PLP E I Sbjct: 652 FGKPLPVEMI 661 >UniRef50_A6QA23 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QA23_SULNB Length = 703 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 173/609 (28%), Positives = 311/609 (51%), Gaps = 48/609 (7%) Query: 217 RTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIR--------------------Q 256 + G IW+ +YD + +V T +DITEE++++ Sbjct: 98 KDGHWIWVLGRARIIYDEAGNPIRMVGTHTDITEEKELQLKYSQQAQVLEQIHDAVILLD 157 Query: 257 LEGNILAAMCSSPPFHEM--GEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQ 314 ++G I + S E E+I +N + +++ S + W S E++ Sbjct: 158 MDGFIRSWNKGSEILFEYRADEVIGKNFSILFSDNITSAYE-------KWIS-----ELK 205 Query: 315 NAQSWSAT--IRQRDGAP---AGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSR 369 + ++++ G P + + ET+ + + DI++ A A+ QE+ + Sbjct: 206 ENGEYKGEMFLQKKSGEPLYAVFSFSLLKNQNGETTEVVSLIHDITEQKKAEAVLQEQ-K 264 Query: 370 QHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAW 425 + D +T LPNR + L+ + K ++ I +D + + DSLG++ Sbjct: 265 NILRYQAHHDALTRLPNRVLFFDRLEQSIRKTARSEKDFALFFIDLDKFKHINDSLGHSI 324 Query: 426 ADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMI 484 D+ L R +E ++ + L R+ G +F ++ + + + +A+++ V+ KP+ I Sbjct: 325 GDRVLRVTAKRIKETIRQEDTLARLSGDEFTVIMEDLGHPEDASVLAEKILLVLQKPMYI 384 Query: 485 DDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERL 542 D+ ++ SIGIS + + LL A AM ++NG N ++F++P M E ER+ Sbjct: 385 DEYTLYISGSIGISLYPQDAMDTESLLKYADTAMYKAKENGRNTFEFYAPEMTEYALERI 444 Query: 543 VLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIG 602 + +LKEAI +L + YQPQI A + G+EAL RW P G + P FI LAE+ G Sbjct: 445 AMKTSLKEAIEKEELCVHYQPQIDARAECIIGVEALVRWQHPTRGLLHPEAFISLAEDTG 504 Query: 603 EIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGH 662 I +I +WV+ A +Q++ W + + L++N+S + +++ + + Sbjct: 505 LIVDIDKWVMRTAMKQVSTWHQEGLVSDVLALNISIKQLEGHNFMEEIAACLDDFDFKPK 564 Query: 663 QLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKS 722 L +EI E +M++ TE +R++ L MG+G+S+DDFGTG+S LS L LP+ +KIDKS Sbjct: 565 WLELEIPEGQVMKNHTETIERLKELSVMGIGISIDDFGTGYSSLSLLKRLPINRLKIDKS 624 Query: 723 FVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPL 782 F++ E+ + A+++AI ++ SL L V+AEGVET +Q + L + C IQGY++SRP+ Sbjct: 625 FIEFIPNEEDV-AIVKAIIALANSLKLDVIAEGVETDDQKDFLVENGCTKIQGYYYSRPI 683 Query: 783 PAEEIPGWM 791 +E++ ++ Sbjct: 684 ASEQMKHFL 692 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 46/202 (22%), Positives = 88/202 (43%), Gaps = 45/202 (22%) Query: 18 LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNR 77 LEQ +L++ + + +N +E L+ Y+ +EVIG N +L ++ A+ ++I + Sbjct: 146 LEQIHDAVILLDMDGFIRSWNKGSEILFEYRADEVIGKNFSILFSDNITSAYEKWISELK 205 Query: 78 EGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQ 137 E G+ + E+ L+KK G ++ F+ S L+++ + E + Sbjct: 206 ENGEYK-----GEMFLQKKSGEPLYAVFSFS------------LLKNQNGETT---EVVS 245 Query: 138 LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRI- 196 LI + + VL +++I++ D L +P NR+ Sbjct: 246 LIHDITEQKKAEAVLQEQKNILRYQ----------------AHHDALTRLP-----NRVL 284 Query: 197 ---RLQQLLWKTARDQDEFLLL 215 RL+Q + KTAR + +F L Sbjct: 285 FFDRLEQSIRKTARSEKDFALF 306 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 165/482 (34%), Positives = 259/482 (53%), Gaps = 22/482 (4%) Query: 321 ATIRQRDGAPAGI-LQIKTSSG--AETSAFIERVADISQHMAALALEQEKSRQHIEQLIQ 377 A I+ + G + L I T +G +I +DIS E++ + I L Sbjct: 380 ALIKHKQGYTFPVALTITTVTGEDGRVECYINTFSDIS--------ERKANEARIHDLAH 431 Query: 378 FDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRF 437 D +TGLPNR +L++ L++ + V ++ +D+ + + D+LG+ DQ L+EV R Sbjct: 432 TDTLTGLPNRMSLYSGLEERLANVQPIGVMILDLDNFKIINDTLGHHVGDQLLVEVARRL 491 Query: 438 REKLKPDQYLCRIEGTQFVLVSLENDVSNITQI----ADELRNVVSKPIMIDDKPF---P 490 + + R+ G +FV+V D TQI A E+ +++P +I+ Sbjct: 492 VCCVGEQGMVARLGGDEFVIVL---DCPQATQIVGRVAKEVLQRLAQPYLIEGYELHSSS 548 Query: 491 LTLSIGISYDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKE 550 +D G + LL AM + +G N ++FF+ M E + ER+ + L++ Sbjct: 549 SIGIGVSPHD-GSDPYSLLKNIDTAMYAAKSSGKNNFKFFTEKMREQINERMQMENHLRQ 607 Query: 551 AISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRW 610 AI N+ +L YQPQ+ TG + G+EAL RW+ P G V P +FI +AEE + +G W Sbjct: 608 AILRNEFELHYQPQVDLGTGRIIGMEALVRWNHPEWGMVHPEKFIRVAEECNLVIPLGEW 667 Query: 611 VIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITE 670 V+ EACRQ+++W Q + +SVN+SA +S L + + M I L +EITE Sbjct: 668 VLCEACRQISQWSRQGLEAVCISVNISARQLKSRYLFTLIDNLMMTHQIKPGMLELEITE 727 Query: 671 SMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTE 730 S +M+ + R++ L++ GV L++DDFGTG+S LS L LP+T +KID+SFV T+ Sbjct: 728 SAVMDDPEQTIPRMKELKNKGVALAIDDFGTGYSSLSYLKLLPLTRLKIDRSFVKDIETD 787 Query: 731 KRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 A+ A ++ ++L L +VAEGVET+ Q E LR C QGY+FS+PLPA I + Sbjct: 788 PNDAAICAATIALARTLGLGLVAEGVETEAQLEYLRAQGCDSAQGYYFSKPLPANNIMAF 847 Query: 791 MS 792 +S Sbjct: 848 VS 849 >UniRef50_Q2W7U0 Predicted signal transduction protein containing a membrane domain n=3 Tax=Magnetospirillum RepID=Q2W7U0_MAGSA Length = 831 Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 164/487 (33%), Positives = 263/487 (54%), Gaps = 28/487 (5%) Query: 312 EIQNAQSWSATI--RQRDGAPAGI-LQIKTSSGAETSAFIERVADISQHMAALALEQEKS 368 ++ W + R +DG P + L I + GA+ +++ +A + ++ Sbjct: 96 QLSTTGQWQGEVVDRHKDGRPVRLWLSITSQRGAD--------GKVARRIAVFR-DVTEA 146 Query: 369 RQHIEQLIQ---FDPMTGLPNRNNLHNYLDDLVDKAV------SPVVYL-IGVDHIQDVI 418 R+ EQL Q FDP+T LPNRN +LD L+ V S V L IG+D +++ Sbjct: 147 RETAEQLWQRSNFDPLTELPNRNL---FLDRLLQALVLAGREGSKVAMLFIGLDGFKNIN 203 Query: 419 DSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLENDVSNITQIADELRNV 477 DSLG+ D+ L E RF+ L+ R G +F V++S + + + + V Sbjct: 204 DSLGHWIGDKVLQEAARRFQNCLRQGDTAARFGGDEFTVVLSGVRATAEVEAVIRSVLEV 263 Query: 478 VSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMN 535 + +P +++ ++ SIG+ G++ D L+ A A+ ++ G N ++FF+PAM+ Sbjct: 264 LQEPFVVEHHHILISCSIGVCMWPGDGEDVDSLMRNATAALQQAKQAGRNTFRFFTPAMD 323 Query: 536 EMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFI 595 + R L L A+S + LV+QP + ++G++ EAL RWH+ G V P +F+ Sbjct: 324 ARAQARSRLADELSGALSQGEFHLVFQPLVDVKSGKVNAAEALLRWHNRYLGVVSPDQFV 383 Query: 596 PLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMH 655 PLAEEIG I IG W++ ACR+ W+ + ++VN+S F+ + + A+ Sbjct: 384 PLAEEIGLIRPIGEWLLTAACREALVWQGMGLGEINIAVNISPRQFQQGDIVGIIRRALE 443 Query: 656 AWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVT 715 + LT+EITE +++ + EI +++ +R +GV LSVDDFGTG+S LS L S PV Sbjct: 444 DTRLPPWLLTIEITEGLLLSNGEEILAKMEAIRTLGVSLSVDDFGTGYSSLSYLKSFPVD 503 Query: 716 EIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQG 775 +KID+SF+ ++EAI ++G SL+L VVAEGVETK+Q + + C V QG Sbjct: 504 VLKIDRSFIADMGDHSDDATMVEAIIALGHSLHLEVVAEGVETKQQLDFITAQGCDVAQG 563 Query: 776 YFFSRPL 782 Y+FS PL Sbjct: 564 YYFSPPL 570 >UniRef50_Q0HUI5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Shewanella RepID=Q0HUI5_SHESR Length = 697 Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 150/430 (34%), Positives = 241/430 (56%), Gaps = 7/430 (1%) Query: 369 RQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYA 424 ++H+E D +TGLPN++ L +D A V LI D + V ++LG+ Sbjct: 260 KEHLEYQRVTDNLTGLPNQHKFEQSLQLALDNAKRSKQQLAVLLINFDQFKYVNNALGHE 319 Query: 425 WADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLENDVSNITQIADELRNVVSKPIM 483 A++ + R + L R F +L++ + +A+ LR V S+P Sbjct: 320 SANEIIKAAARRLDQCDWLSGSLARFSSGDFAILLAKTGSADEVAMVAERLRMVCSEPYR 379 Query: 484 IDDKPFPLTLSIGIS-YDL-GKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKER 541 + + F LT S+G+S Y G +L+ A +AM + + G + QF+S +++ V ER Sbjct: 380 VAGQVFHLTASVGVSSYPADGDMVWHLIKHAESAMYHAKDQGRDQIQFYSAHLSKAVSER 439 Query: 542 LVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEI 601 ++L L+ A+ Q +L YQP+I ++ G+EAL RW+ P+HG + P+ FIPLAE + Sbjct: 440 ILLERDLRIALIEKQFELYYQPKIRLADKQVAGVEALLRWNRPMHGFMSPALFIPLAESL 499 Query: 602 GEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDG 661 G I IG WVI AC+QL+ W +Q + ++VNLS S+ L ++V + + I Sbjct: 500 GLINQIGDWVIETACQQLSAWSTQGLGEVQIAVNLSPSQLTSSTLLDRVKLLLAQYAIKP 559 Query: 662 HQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDK 721 + L +E+TESMMM + E ++Q LR++ + L +DDFGTG+S +S L LP+ +K+D+ Sbjct: 560 NMLEMEVTESMMMHNPEEAISKLQALRELNIQLYIDDFGTGYSSMSYLKRLPINALKLDR 619 Query: 722 SFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRP 781 SF+ T+ R + E I + L L VVAEGVET+ Q++ L + C +IQGY +SRP Sbjct: 620 SFIIHMATDPRDADVCEGIIELAHKLGLDVVAEGVETQAQYDALLERGCDIIQGYLYSRP 679 Query: 782 LPAEEIPGWM 791 LP E++ ++ Sbjct: 680 LPIEQVSRFL 689 >UniRef50_B0CC56 Diguanylate cyclase/phosphodiesterase with GAF domain n=2 Tax=Acaryochloris marina MBIC11017 RepID=B0CC56_ACAM1 Length = 787 Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 160/509 (31%), Positives = 269/509 (52%), Gaps = 33/509 (6%) Query: 319 WSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQF 378 WS + G G + +A + + H+A++A+E ++ + ++Q F Sbjct: 280 WSTPFFSQSGDLLGTFALSHQVPCSPTAHHLNIIKTATHLASIAMEGHRTAEQLKQKALF 339 Query: 379 DPMTGLPNRNNLHNYLDDLVDKA--------------VSPVVYLIGVDHIQDVIDSLGYA 424 D +TGLP+R+ + L + + + + VDH + V DSLG++ Sbjct: 340 DNLTGLPSRDYFYEQLQRKLQQVQRQQLEGYSRQAELCHFAILFLDVDHFKLVNDSLGHS 399 Query: 425 WADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQ---IADELRNVVSKP 481 DQ L+ + + +E L+P L R+ G +F + L + V N Q I ++ ++KP Sbjct: 400 VGDQLLVAIAQQLKESLRPQDLLARLGGDEFAI--LLDGVVNHQQAHKIVQRIQRSLAKP 457 Query: 482 IMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVK 539 + ++ + ++SIGI++ L ++ + LL A AM + +G G+ F M++ V+ Sbjct: 458 LKLNQQEVFTSVSIGITHSTSLYQHPEELLRDADTAMYRAKAHGRGGYVVFDETMHKQVR 517 Query: 540 ERLVLGAALKEAI-----SNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRF 594 RL LG +L+ A+ N L YQP L G EAL RWH P G + P +F Sbjct: 518 SRLWLGNSLRYAVKAIEQGQNPFLLQYQPIFCLRQQRLIGFEALLRWHHPQQGLISPEKF 577 Query: 595 IPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIP-ALSVNLSALHFRSNQLPNQVSDA 653 IP+AEE G I +G+WV+ AC+QLA W Q +P +S+N+S+ F V Sbjct: 578 IPVAEETGLIIPLGQWVLKAACQQLAVWE-QEFSVPLTMSINVSSQQFLQPNFVQSVESL 636 Query: 654 MHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLP 713 M + + GH L +EITE+++ME + R++ L+++G+ LS+DDFGTG+S L+ L +LP Sbjct: 637 MQSHQLAGHHLKLEITETVLMESTHYVTDRLEQLQNLGISLSLDDFGTGYSSLNYLYNLP 696 Query: 714 VTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVI 773 + +KID+SFV + +++ I ++ L + VVAEG+ET EQ + L + C + Sbjct: 697 INTLKIDRSFVWGIGQGQD--QIVKTIIALAHGLEMNVVAEGIETIEQMQYLHTLGCELG 754 Query: 774 QGYFFSRPL---PAEEIPGWMSSVLPLKI 799 QGY+F+RPL A+++ +SS + L + Sbjct: 755 QGYWFARPLQPEAAQQVIATLSSPMSLSL 783 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 157/458 (34%), Positives = 251/458 (54%), Gaps = 23/458 (5%) Query: 347 FIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP-- 404 ++ ADIS E + S+ + +L+ DP+TGLPNR +H LD + A Sbjct: 532 YVGVFADIS--------EIKHSQSRLNELVNRDPLTGLPNRRLMHELLDHAIKYAEREQN 583 Query: 405 --VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLE 461 + + +D + + D+LG+ D+ L EV R R ++ + R+ G +F V++ + Sbjct: 584 EIALLFVDLDRFKAINDTLGHQMGDKLLFEVSQRIRAAVRDSDAVARLGGDEFIVMMDVL 643 Query: 462 NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYI 519 + + ++A ++ + + +ID + ++ S+GIS D + D L+ A AM + Sbjct: 644 REREDAAKVAKKIISSLQNEFLIDGRELFISASVGISVYPDDSLDVDGLIKAADIAMYQV 703 Query: 520 RKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALA 579 + G N F+S +++ ER L L+ A++ +Q ++ YQ Q+ ETG + G E+L Sbjct: 704 KNKGKNNHCFYSADLSQNAVERFTLENQLRRALARDQFEVYYQAQVSLETGRIIGAESLI 763 Query: 580 RWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSAL 639 RW P G V P++FIPLAEE G I IG WV+ ++ Q+ EW Q I +SVN+S + Sbjct: 764 RWIHPELGVVSPAKFIPLAEETGLIIPIGEWVLRQSAMQVKEWHDQGFDIDWVSVNVSGV 823 Query: 640 HFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTE----IFKRIQILRDMGVGLS 695 + + + V + + H L +EITES +M H+TE +F RI + +GV L+ Sbjct: 824 QIQRSNFADTVYGILVETDCESHLLELEITESTVM-HNTEYVIDVFDRI---KHLGVRLA 879 Query: 696 VDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEG 755 +DDFGTG+S LS L LP+ +IKID+SFV A+ AI ++ QSL TV+AEG Sbjct: 880 IDDFGTGYSSLSHLKRLPLDKIKIDQSFVRDLPNNSDDAAIATAINAMAQSLGFTVIAEG 939 Query: 756 VETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 VET++Q L+KI C+ QGY +SRP+ A E + + Sbjct: 940 VETRQQASFLKKIGCQQGQGYLYSRPVTASEFTALLRA 977 >UniRef50_A6Q5V4 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q5V4_NITSB Length = 793 Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 162/478 (33%), Positives = 261/478 (54%), Gaps = 15/478 (3%) Query: 319 WSATI--RQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLI 376 WS I +++DG+ LQ + + I A I++ + LA +QE I++L Sbjct: 315 WSGEIVDKRKDGSLFYALQSIFAIKDPLTNKITHYAAITKDITELAKKQET----IQKLA 370 Query: 377 QFDPMTGLPNRNNLHNYLDDLV---DKAVSPVVYL-IGVDHIQDVIDSLGYAWADQALLE 432 +DP+T L NR + LD+ + + P L I +D+ +++ D+LG+ D+ L Sbjct: 371 FYDPLTKLANRVSFLQTLDEFIALGKRESFPFALLFIDLDNFKEINDTLGHDTGDKLLQA 430 Query: 433 VVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPL 491 V R + L+ + R+ G +FV+++ + S ++A L+N +P+M+DD+P + Sbjct: 431 FVKRLKSLLREEDIAARLGGDEFVVLAPGISSPSKALELACRLQNAFQQPLMVDDRPITV 490 Query: 492 TLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALK 549 +SIGI+ KN + LL A AM Y K N F M + E++ L LK Sbjct: 491 QMSIGIALFPQDAKNANELLKAADIAM-YKAKEKKNRCVLFQENMQQEALEKVTLKQELK 549 Query: 550 EAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGR 609 +AI N+L L QP+I T ++ G EAL RW+ P G +PPS+FIPLAEE I + Sbjct: 550 KAIEKNELMLYLQPKISVRTKKVEGFEALIRWNHPTRGFIPPSKFIPLAEESALIIPLTE 609 Query: 610 WVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEIT 669 W+ E R L + + I P +++N+SA HF +++L Q++ + I + +E+T Sbjct: 610 WIFQEVDRLLDQLQQNGIESP-IAINISARHFATDKLIEQITTNIKKEYIQKGLIELEVT 668 Query: 670 ESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLT 729 ES +ME + +Q L G+ +++DDFGTG S L L LP+ IKIDK+F+D + Sbjct: 669 ESAVMEDINKAMHYLQKLHSFGIKVALDDFGTGHSSLQYLKKLPIDTIKIDKTFIDHIIN 728 Query: 730 EKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 + + A++E+ + L + VAEGVETKEQ + L KI IQGY++++P+P EE+ Sbjct: 729 DNKDQAIVESTIEMADKLGMDTVAEGVETKEQAQFLEKIGIDYIQGYYYAKPMPFEEM 786 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 220/836 (26%), Positives = 370/836 (44%), Gaps = 122/836 (14%) Query: 34 VMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARV--------- 84 ++F + ++L GY E++G E I H ++ G+ R Sbjct: 118 MVFVSDGCQELSGYASSEILGKT----------GVSWEEITHPQDRGRVRACIEDAIGSG 167 Query: 85 EGMSRELQLEKKDGSKIWT-------RFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQ 137 + + + ++ K G W R L + EG + +++ R + EQ + Sbjct: 168 QRFAVQYRIVCKSGQVKWVIERGVAIRDELDESVIEGFIEDISVRRTTLEALEAAEQRYR 227 Query: 138 LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIR 197 I +H + + H + N A +++GY A + D AD Sbjct: 228 NIF--EHASEGIFQSTRDGHYLAANPALAKLYGY--DNAQALMTDL--------AD---- 271 Query: 198 LQQLLWKTARDQDEFLLLT---------------RTGEKIWIKASISPVYD--------- 233 +++ L+ ++EFL L R G +IWI + V+ Sbjct: 272 IERRLYVQPNRREEFLTLIEKNGAILNFESEVYRRDGSRIWISENAHVVFGPQGEFICYE 331 Query: 234 -----------VLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPF-----HEMGEI 277 AHLQ + M FS+ E + I+A ++P F ++ ++ Sbjct: 332 GTVQDISERKRTEAHLQLMAMVFSNSNEAIIVTDASNRIIA---TNPAFTCLTGYQPDDV 388 Query: 278 ICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIK 337 I +N P ++ + E+ + W T R+GA G L + Sbjct: 389 IGKN-------------------PRILSAGTTPTEV-FSDMW--TCLHREGAWQGELWDR 426 Query: 338 TSSGAETSAFI------ERVADISQHMAALA--LEQEKSRQHIEQLIQFDPMTGLPNRNN 389 +G ++ + I H+ + E + +++ I L D +T L NR + Sbjct: 427 KKNGEAYPKWLSISLVRDEDGQIRNHIGSFIDISELKATQERIRHLAHHDTLTNLANRFS 486 Query: 390 LHNYLDDLV----DKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQ 445 LH L + + + LI +D + + D+LG+ D+ L++V R ++ Sbjct: 487 LHEKLAQALAFCKRNRMQLALMLIDLDRFKTINDTLGHQAGDELLVQVAKRLSHAVRESD 546 Query: 446 YLCRIEGTQFVL-VSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGKN 504 + R+ G +FV+ + ++ +AD++ +S P +I + + SIGI G Sbjct: 547 IVARLGGDEFVIALPGIGSPADAAHLADDITREISAPYLIKGQELRTSPSIGICVYPGDG 606 Query: 505 RDY--LLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQ 562 + LL A AM + + NG +QFF+ MN ER+ L + L+ AI+ + L YQ Sbjct: 607 SEIGDLLKNADVAMYHAKANGRGNYQFFTEDMNIATTERMCLESDLRLAITRREFLLHYQ 666 Query: 563 PQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEW 622 PQ+ +G + G+EAL RW P G V P+ FIP+AEE G I IG WV+ EACRQL W Sbjct: 667 PQLDLRSGTIVGVEALIRWQHPTRGLVSPADFIPIAEESGMIAAIGDWVLEEACRQLKVW 726 Query: 623 RSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFK 682 +++ I +S+NLSA F LP ++ + + A + +L +E+TESM M E Sbjct: 727 QNRGITHLRMSINLSAGQFLDKTLPARIHELLAANDLSADRLDLEVTESMSMASPDESIS 786 Query: 683 RIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITS 742 ++ L G+ LS+DDFGTG+S L+ L LP+ +KID+SFV ++ + + Sbjct: 787 VMKTLSSSGLTLSIDDFGTGYSSLAYLKLLPIHTLKIDRSFVKDIESDPNDADICDVTVL 846 Query: 743 IGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLK 798 + L L VVAEGVET+ Q + L I C +QGY S+PLPA++ ++ + P+K Sbjct: 847 LAHKLGLEVVAEGVETEAQLKFLLSIGCEKVQGYLISKPLPADQAERFIRNNPPMK 902 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 64/262 (24%), Positives = 114/262 (43%), Gaps = 31/262 (11%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 ++A++GIF + + + A NPA KL+GY + + ++ I R L Sbjct: 231 EHASEGIFQSTRDGHYLAA------------NPALAKLYGYDNAQALMTDL-ADIERRL- 276 Query: 67 PAHPEYIRHN-REGGKARVEG----MSRELQLEKKDGSKIW-TRFALSKVSAEGK-VYYL 119 Y++ N RE +E ++ E ++ ++DGS+IW + A +G+ + Y Sbjct: 277 -----YVQPNRREEFLTLIEKNGAILNFESEVYRRDGSRIWISENAHVVFGPQGEFICYE 331 Query: 120 ALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 V+D S + + + + + + +IV D I+ N AFT + GY + G Sbjct: 332 GTVQDISERKRTEAHLQLMAMVFSNSNEAIIVTDASNRIIATNPAFTCLTGYQPDDVIGK 391 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 P +L+ P + + L + Q E + GE SIS V D ++ Sbjct: 392 NP-RILSAGTTPTEVFSDMWTCLHREGAWQGELWDRKKNGEAYPKWLSISLVRDEDGQIR 450 Query: 240 NLVMTFSDITE----ERQIRQL 257 N + +F DI+E + +IR L Sbjct: 451 NHIGSFIDISELKATQERIRHL 472 >UniRef50_B6BGL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGL3_9PROT Length = 671 Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 148/429 (34%), Positives = 246/429 (57%), Gaps = 6/429 (1%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP-VVYLIGVDHIQDVIDSLG 422 ++ K+R +E D +TGLPNR+ + + +V+K + + + +D+ + + DSLG Sbjct: 235 KERKARYELEYFANHDSLTGLPNRHAYIDKITSMVNKNKNNFALIFMDLDNFKTINDSLG 294 Query: 423 YAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNIT--QIADELRNVVSK 480 + D L +V R + ++K L R G +FV + N S +T + ++ V+ K Sbjct: 295 HTLGDMLLQKVAKRLKNEIKEYDMLSRFGGDEFVFL-FSNVQSELTIEKTMIKIHEVLKK 353 Query: 481 PIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMV 538 P +++ T SIGI+ D ++ + LL A AM +++G + + FF+ M + Sbjct: 354 PFILNTYEVYTTASIGIAIYPDDAQDAELLLRNADVAMYDAKQSGRSKYSFFNADMLNLS 413 Query: 539 KERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLA 598 RL+L + L +A+ NN+L L++QPQ+ ++ G+EAL RW P G + P FIP+A Sbjct: 414 SNRLMLESELHKALENNELFLLFQPQVSLWNEKIVGVEALIRWQHPTKGLISPLDFIPIA 473 Query: 599 EEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWG 658 E G I IG W+I +AC QLA W+ ++ LS+N+SA L + + A+ Sbjct: 474 ENSGLIMPIGEWIIDQACDQLALWKDTHMSEATLSINVSAKQVLHQDLYSYIEAAIERTK 533 Query: 659 IDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIK 718 IDG L +EITES++ME+ E + + L+ +GV +++DDFGTG+S LS L LP+ ++K Sbjct: 534 IDGRFLELEITESVIMENINETVRILSRLKKLGVSIAIDDFGTGYSSLSYLKKLPIDKLK 593 Query: 719 IDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFF 778 ID+ F+ +K +A+ AI S+ +SL+L +VAEG ETKE E L+ C + QG+++ Sbjct: 594 IDREFIKDIPNDKDDIAITNAIISMSKSLSLKIVAEGPETKEHIEFLQNSKCDIAQGFYY 653 Query: 779 SRPLPAEEI 787 S+P+ E+ Sbjct: 654 SKPITIVEV 662 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 156/453 (34%), Positives = 248/453 (54%), Gaps = 18/453 (3%) Query: 342 AETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA 401 ETS F+ DI+ E++K+ Q + L FD +TGLPNR + L+ + +A Sbjct: 1055 GETSHFVAVFTDIT--------ERKKAEQDLRFLASFDTLTGLPNRTLFQDRLNHAITQA 1106 Query: 402 --VSPVVYLI--GVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVL 457 + +V L+ +D + + DS+G+ D L R + ++ + R+ G +F + Sbjct: 1107 HRANNIVALLFLDLDRFKHINDSMGHHVGDLLLKAAAKRLQNAVREGDTVARLGGDEFTI 1166 Query: 458 VSLEN--DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAH 513 + LE T I++++ P +++DK ++ SIGIS + N D L+ A Sbjct: 1167 I-LEGVAKTKAATLISEKVLRAFQTPFLLEDKSLTISTSIGISLYPNDADNADSLIKFAD 1225 Query: 514 NAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELY 573 AM + + G N +QF++ +NE+ ++L A LK+AI N+L LVYQP+ G L Sbjct: 1226 TAMYHAKSLGRNNFQFYTHKLNEIATRHVLLEAGLKQAIHRNELSLVYQPKFSLRDGSLT 1285 Query: 574 GIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALS 633 G+EAL RWH G + P FIPLAEE G I IG WVI AC+QLAEW + + +++ Sbjct: 1286 GLEALLRWHHTELGPISPVEFIPLAEETGIINQIGHWVINHACQQLAEWNALGFNNISMA 1345 Query: 634 VNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVG 693 VNLSA +++ + + + A+ G+ L +E+TESM+M + + + L+ +G+ Sbjct: 1346 VNLSARQLKAD-IISTIEVALAVSGLPAQSLELELTESMIMGNPQDSVSILSKLKALGLT 1404 Query: 694 LSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVA 753 +++DDFGTG+S LS L P+ +KID+ FV + A+ AI ++ SL L VVA Sbjct: 1405 IAIDDFGTGYSSLSYLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNVVA 1464 Query: 754 EGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEE 786 EGVET+ Q L C +QG+ S+PL A++ Sbjct: 1465 EGVETQAQLNFLGLQGCDEVQGFLLSKPLSAKD 1497 >UniRef50_Q89WT2 Bll0596 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89WT2_BRAJA Length = 833 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 161/435 (37%), Positives = 246/435 (56%), Gaps = 18/435 (4%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV----DKAVSPVVYLIGVDHIQDVID 419 EQ +S I + Q D +T LPNR L ++ + + + V ++ +D ++V D Sbjct: 391 EQRRSEAKIAHMAQHDALTDLPNRVLLRERMEHAIAVTRNGGLDLAVLMLDLDRFKEVND 450 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVS-LENDVSNITQIADELRNVV 478 +LG+ D L V R RE + R+ G +F ++ + N +A+ +R + Sbjct: 451 TLGHPTGDSLLRAVATRLRECTTETALIARLGGDEFAVIDYVTNPAVEAAALAENIRKAL 510 Query: 479 SKPIMIDDKPFPLTLSIGISYDL--GKNRDYLLSTAHNAMDYIRKNGGNG-WQFFSPAMN 535 +P + D + SIGI+ G + D ++ +A A+ Y K+GG G ++FF P ++ Sbjct: 511 CEPFDLGDHRVTVGTSIGIAIAPRDGNDSDVIMKSADLAL-YSAKSGGRGAFRFFEPELD 569 Query: 536 EMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFI 595 E++ R L +++AI Q +L YQP + TG++ G EAL RWH P G V PS FI Sbjct: 570 ELMHARRNLERDMRDAIVGRQFELHYQPFVSPATGKVNGFEALLRWHHPQQGLVMPSEFI 629 Query: 596 PLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMH 655 PLAEE G I +G WV+ AC + A+W H+ ++VNLS FRS +L V A+ Sbjct: 630 PLAEETGLIVPLGEWVLRAACAEAAKWPP---HV-RIAVNLSPAQFRSKELVPVVIGALA 685 Query: 656 AWGIDGHQLTVEITESMMMEHDTE-IFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPV 714 + G+ H+L +E+TE+++M HD+E +F + LR++GV +++DDFGTG+S LS L P Sbjct: 686 SSGVAPHRLELEVTETVIM-HDSEAVFAVLGQLRELGVRIALDDFGTGYSSLSFLQKFPF 744 Query: 715 TEIKIDKSFVDRCLTEKRILA--LLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRV 772 +IKID+SFV+ L+ R A L A+ SL T AEGVETKEQ ++L + C Sbjct: 745 DKIKIDRSFVNE-LSSARAEARHLARAVVRFAVSLGKTTTAEGVETKEQLDILCEEGCLE 803 Query: 773 IQGYFFSRPLPAEEI 787 QGY+FSRP+PA +I Sbjct: 804 TQGYYFSRPMPASDI 818 >UniRef50_B1M8T6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M8T6_METRJ Length = 776 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 152/443 (34%), Positives = 247/443 (55%), Gaps = 15/443 (3%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVID 419 E+ ++ I+Q+ +D +TGL NR++ + + + + V+L+ +DH + + D Sbjct: 335 ERRRNEARIQQMASYDDLTGLLNRSSFKAKVSEALKASARSKGDFAVHLLDLDHFKVIND 394 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVS 479 +LG+ D+ L V +R R + R+ G +FV+V + V++ D R V+ Sbjct: 395 TLGHPAGDRLLQMVADRLRGIGALSGSVARLGGDEFVIV--QQSVTSPAVAEDLARRVLQ 452 Query: 480 ---KPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAM 534 +P ID + SIGI+ + D LL A A+ I+ G +G++ F M Sbjct: 453 ELERPFDIDGTHVTVGASIGIAIAPFHANDEDRLLKCADIALYAIKGAGRSGFKIFQHEM 512 Query: 535 NEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRF 594 + R L + L+ A++N +L+L YQP + + TG + EAL RWH P+ G++PPS F Sbjct: 513 EAATRARHALESDLRAALTNGELELHYQPIVDSSTGAIVSCEALLRWHHPVSGYIPPSDF 572 Query: 595 IPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAM 654 IP+AE+ G I +G WV+ EACR+ +W S +++VN+S F QL V A+ Sbjct: 573 IPVAEDTGLIVQLGNWVLNEACREARKWPST----VSVAVNMSPRQFGDPQLAFHVIGAL 628 Query: 655 HAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPV 714 + G+ H+L +EITES+ + +I + I LR +G+ LS+DDFGTG+S LS L + Sbjct: 629 NRSGLPAHRLELEITESVTLGATHKIVETINKLRQLGIRLSIDDFGTGYSSLSSLRNFAF 688 Query: 715 TEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQ 774 ++KID+SFV + A++ AI +G+S+ + +V EGVET+ Q +LR C +IQ Sbjct: 689 DKLKIDRSFVSDLDRKAESTAIIRAIVGMGRSIGMAIVVEGVETETQLSILRTEGCDLIQ 748 Query: 775 GYFFSRPLPAEEIPGWMSSVLPL 797 GY FSRP+ A +I +++ PL Sbjct: 749 GYVFSRPVAAPQIRTMLAAAGPL 771 >UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31G31_THICR Length = 891 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 143/423 (33%), Positives = 243/423 (57%), Gaps = 7/423 (1%) Query: 379 DPMTGLPNRNNLHNYLDDLVDKAV----SPVVYLIGVDHIQDVIDSLGYAWADQALLEVV 434 DP+T LPNR + L + +A + I +D +++ DS G+A D L+E Sbjct: 464 DPLTDLPNRILFLDRLTQAIHQAQRNHDKVALLFIDLDRFKEINDSFGHASGDLVLIECG 523 Query: 435 NRFREKLKPDQYLCRIEGTQFVLVSLENDVSN-ITQIADELRNVVSKPIMIDDKPFPLTL 493 R ++ ++ + R+ G +F ++ E +N I + ++ +S PI +++ F +T Sbjct: 524 KRLKKAIREIDTVARLGGDEFTILIDELKTNNVIINVVKKIIKTLSDPIFVNENIFHITA 583 Query: 494 SIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEA 551 SIGIS + G + + LL A AM +++G N + F++ M E RL++ L++A Sbjct: 584 SIGISIFPNDGTDANQLLQNADAAMYQAKEDGKNTYHFYTKEMTEQAYNRLLMENNLRDA 643 Query: 552 ISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWV 611 + N Q +L YQPQ+ T ++ G EAL RW+ G +PP FIPLAEE G I +G+ + Sbjct: 644 LDNQQFELYYQPQVDITTNKIVGFEALVRWNHEQKGIIPPDHFIPLAEETGLIIPLGKQI 703 Query: 612 IAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITES 671 IA A + ++EW N+ +++N+SA R ++ + ++ A++ + +EITES Sbjct: 704 IAMASQTISEWHQANLTNARIAINVSAKQLRDSRFFHNLNTALNKNNCQPDWIEIEITES 763 Query: 672 MMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEK 731 +M++ K + LR G+ +S+DDFGTG+S L+ L LP+T++KID+SFV +K Sbjct: 764 SVMQNPELAIKLLSKLRRKGITISIDDFGTGYSSLAYLKKLPITKVKIDRSFVSNLPQDK 823 Query: 732 RILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 + +AI S+ QSLNL ++AEG+ET+EQ + + C++IQGY++SRPL + + + Sbjct: 824 DDAEITKAIISMSQSLNLDIIAEGIETQEQQNFVLQEGCKLIQGYYYSRPLTKKAMTAKL 883 Query: 792 SSV 794 S+ Sbjct: 884 ESL 886 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 218/734 (29%), Positives = 351/734 (47%), Gaps = 91/734 (12%) Query: 104 RFALSKVSAEGKVYYLALVRDAS----VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIV 159 RF +++ V +A+VRD S E+A +E +L + +++LD + ++ Sbjct: 642 RFFDARIVRLSPVETIAVVRDISDRKQTELALRESEERLKTIISTNPNGLLILDLQGKVL 701 Query: 160 QCNRAFTEMFGY-----------------CISEASGMQPDTLLNIPEFPADNRIRLQQLL 202 N A +FG SE +QP L I R+RL +++ Sbjct: 702 FVNPAAEILFGRKQEDLMGQILGIPIIVNNYSEIEILQPSGKLIIV------RMRLVKII 755 Query: 203 WKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQ----IRQLE 258 W+ +++ FL AS+ V D+ + L + + TE+ I E Sbjct: 756 WQ---EKNAFL------------ASLVDVTDIQQAQEQLKILYQ-ATEQSPVSVVITDAE 799 Query: 259 GNILAAMCSSPPF-----HEMGEIICRNI------ESVLNESHVSLFALRNGMPIHWASS 307 G I +P F ++ E+I +N E+ E + +G W Sbjct: 800 GTIEYV---NPKFEKITGYQRAEVIGQNPRILKSGETTTEEYKQIWKTITSGQ--EWHGE 854 Query: 308 SHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEK 367 H + W A A I IK + G T F+ DI++ A Sbjct: 855 FHNKKKNGELFWEA---------ASISPIKNAEGIITH-FVAVKEDITERKA-------- 896 Query: 368 SRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV---DKAVSPV-VYLIGVDHIQDVIDSLGY 423 + + +D +TGLPNR + L + D+ V V I +DH +DV D+LG+ Sbjct: 897 QQTTLTYQANYDALTGLPNRFLAIDRLKQAILQADRQKKRVAVMFIDLDHFKDVNDTLGH 956 Query: 424 AWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN--DVSNITQIADELRNVVSKP 481 + D L +V R ++ L+ + R+ G +F+++ L N + + IA ++ + + KP Sbjct: 957 EYGDLLLQKVSQRLKQCLRKSDTVARLGGDEFLII-LPNLRETHHCKLIASKILSSLEKP 1015 Query: 482 IMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVK 539 + + ++ SIGI+ D G + L+ A AM ++ G N ++F++ MNE + Sbjct: 1016 FNLLTEEAFISASIGITLYPDDGNDVSVLMRNADAAMYLGKRGGRNDFKFYTMGMNEEAQ 1075 Query: 540 ERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAE 599 RL + L+ A+ N+ LVYQP I + G EAL RW++P G V P +FI +AE Sbjct: 1076 SRLRIEKLLRYALKKNEFYLVYQPIIDLRFQTVIGAEALLRWNNPELGRVSPDQFISIAE 1135 Query: 600 EIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGI 659 E G I +G WVI++AC+++ W++Q I ++VNLS FR ++L +S+A+ GI Sbjct: 1136 ETGLISELGAWVISQACQEVVNWQTQGSPI-WVAVNLSPRQFRESKLLEIISNAITLNGI 1194 Query: 660 DGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKI 719 H L +EITE +++E I+ L +M LS+DDFGTG+S LS L+ P +KI Sbjct: 1195 TNHYLELEITEKLLLEDFPGSKGIIEQLHEMDFRLSIDDFGTGYSALSYLIKFPFNRLKI 1254 Query: 720 DKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFS 779 D+SF+ + +LAL++ I ++G L L V+AEGVET EQ +L C QGYFFS Sbjct: 1255 DRSFIADIPHNQEVLALVKTIIAMGHGLKLQVIAEGVETTEQANILEAEGCDYAQGYFFS 1314 Query: 780 RPLPAEEIPGWMSS 793 RPL +EE ++ S Sbjct: 1315 RPLLSEEFRRYLQS 1328 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 59/236 (25%), Positives = 100/236 (42%), Gaps = 31/236 (13%) Query: 21 NMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGG 80 N G ++++ +V+F NPAAE L+G K+E+++G + + I Sbjct: 687 NPNGLLILDLQGKVLFVNPAAEILFGRKQEDLMGQILGIPI------------------- 727 Query: 81 KARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLII 140 + E+++ + G I R L K+ + K +LA + D + +EQ + L Sbjct: 728 ---IVNNYSEIEILQPSGKLIIVRMRLVKIIWQEKNAFLASLVDVTDIQQAQEQLKILYQ 784 Query: 141 AVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQ 200 A + V++ D E I N F ++ GY +E G P L + + + Sbjct: 785 ATEQSPVSVVITDAEGTIEYVNPKFEKITGYQRAEVIGQNPRILKS-----GETTTEEYK 839 Query: 201 LLWKTARD----QDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER 252 +WKT EF + GE W ASISP+ + + + V DITE + Sbjct: 840 QIWKTITSGQEWHGEFHNKKKNGELFWEAASISPIKNAEGIITHFVAVKEDITERK 895 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 11/138 (7%) Query: 3 LTDADNAAD--GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 +TD A + I + A EQ+ + V+ + + + NP EK+ GY+R EVIG N Sbjct: 769 VTDIQQAQEQLKILYQATEQSPVSVVITDAEGTIEYVNPKFEKITGYQRAEVIGQN---- 824 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMS--RELQLEKKDGSKIWTRFALSKV-SAEGKVY 117 PR L+ + ++ K G E +KK+G W ++S + +AEG + Sbjct: 825 -PRILKSGETTTEEY-KQIWKTITSGQEWHGEFHNKKKNGELFWEAASISPIKNAEGIIT 882 Query: 118 YLALVRDASVEMAQKEQT 135 + V++ E ++ T Sbjct: 883 HFVAVKEDITERKAQQTT 900 >UniRef50_A4WAU1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Enterobacteriaceae RepID=A4WAU1_ENT38 Length = 709 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 145/429 (33%), Positives = 236/429 (55%), Gaps = 9/429 (2%) Query: 370 QHIEQLIQFDPMTGLPNRNNLHNYLDD-----LVDKAVSPVVYLIGVDHIQDVIDSLGYA 424 + +E +FD +TGL NR+ + L D L++K V++L +DH + + D+ G+ Sbjct: 254 KQLELQARFDALTGLANRHQMDISLQDCLHTSLLNKKQFAVMFL-DIDHFKLINDAWGHQ 312 Query: 425 WADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMI 484 D+ L+ V R +L P L R+ G +F+L+ + D IT ++ L + + +P I Sbjct: 313 VGDELLINVAQRITARLVPGMTLARLGGDEFILLVPDCDDEKITTLSMTLLDEIRRPFAI 372 Query: 485 DDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERL 542 +TLS+G+S G+ L A AM +I++ G NGW + P M++ + Sbjct: 373 GGHAINVTLSVGVSLYPQHGETLHELKFKADAAMYHIKQEGRNGWAIYRPEMSKSITAEP 432 Query: 543 VLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIG 602 L +A+ Q +L YQP A+ E++G EAL RWH P G + P+ F+P E+ G Sbjct: 433 SFLQDLTQALEREQFELWYQPTYLADANEIHGFEALIRWHHPEQGVLLPAVFLPSLEKTG 492 Query: 603 EIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGH 662 I +G W I +ACRQL W Q LS NLS + F + ++ + + ++ Sbjct: 493 LIIPVGVWAIEQACRQLRFWTEQGFGQWTLSFNLSPVQFEQQDIFEIITSTIQKYNLEPS 552 Query: 663 QLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKS 722 +L +E+TES +++ + + G +S+DDFGTG+S L L LP E+KIDKS Sbjct: 553 RLILEVTESTALKNLERSIELLNAFSQAGFIVSIDDFGTGYSNLLMLNVLPAKELKIDKS 612 Query: 723 FVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPL 782 F+D L + ++E I ++ +++++ VVAEG+ET EQ ++L + C +QGY+FSRPL Sbjct: 613 FIDSMLDNNKSQKIVETIINVARTMDMVVVAEGIETAEQQQILTNLGCDYLQGYYFSRPL 672 Query: 783 PAEEIPGWM 791 PAE++P W+ Sbjct: 673 PAEQVP-WL 680 >UniRef50_Q3A1F4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1F4_PELCD Length = 703 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 149/426 (34%), Positives = 232/426 (54%), Gaps = 7/426 (1%) Query: 367 KSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV---SPV-VYLIGVDHIQDVIDSLG 422 +++Q I QL FD +TGLPNR + + + +A SP+ V +I +D + V D+ G Sbjct: 259 QAKQKIRQLAYFDGLTGLPNRQLFLEHCNSSLTQARRNRSPLGVCIIDIDRFKGVNDTYG 318 Query: 423 YAWADQALLEVVNRFREKLKPDQYLCRIEGTQFV-LVSLENDVSNITQIADELRNVVSKP 481 Y D L V R + + + L R+ +F +++ + +A ++ + +++P Sbjct: 319 YESGDALLKTVSQRLSDCMSREDVLARLGSDEFAAVIASVGSQDEFSVLAQKMLHCLTEP 378 Query: 482 IMIDDKPFPLTLSIGISYDL--GKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVK 539 I I ++ + +GI+ G + + LL A AM +++G N ++FFS MN M Sbjct: 379 IQIGEQKLYCSGGMGIALFPVDGVDAEALLKNAATAMHQAKQHGSNNFRFFSKGMNRMAW 438 Query: 540 ERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAE 599 ER+ + L+ A+ QL L YQPQ+ +TG + G+EAL RW P G V P RFIPLAE Sbjct: 439 ERIEIETGLRRALDLQQLALHYQPQVDLKTGHIIGMEALLRWESPELGRVSPMRFIPLAE 498 Query: 600 EIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGI 659 E G I IG WV+ ACRQ W ++VN+SA F+ +++ + GI Sbjct: 499 ETGLILPIGNWVLESACRQAKAWHRAGFPSLRMAVNISARQFKQAGFIDRLDAIIQRSGI 558 Query: 660 DGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKI 719 + L +E+TES++ME E + ++ G+ L++DDFGTG+S LS L P+ IK+ Sbjct: 559 NPELLEMELTESLIMEKSDETLMTLVDIKSRGIKLAIDDFGTGYSMLSYLKHFPIDRIKV 618 Query: 720 DKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFS 779 D+SFV A+ EAI ++ SL + V+AEG+ET+EQ L+ C QGY+F Sbjct: 619 DRSFVRDIPENTDDAAITEAIIAMAHSLKIEVIAEGIETREQLAFLKDRACEEGQGYYFG 678 Query: 780 RPLPAE 785 RP+P E Sbjct: 679 RPVPVE 684 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 147/417 (35%), Positives = 240/417 (57%), Gaps = 7/417 (1%) Query: 378 FDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEV 433 +DP+TGLPNR+ + L + ++ + ++ +D+ + + D+LG++ D L +V Sbjct: 428 YDPLTGLPNRSLFSDRLKMALAQSKRNNEMCALIILDLDNFKAINDTLGHSVGDMLLKQV 487 Query: 434 VNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLT 492 + + L+ + RI G +F+++ + D+++ T+ AD + +P +++ K + +T Sbjct: 488 AEKIKGYLREVDTVARIGGDEFIIIQPQIKDINDATRAADRILKKFQQPWILEGKEYYIT 547 Query: 493 LSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKE 550 S+GI + G++ + A A+ ++ G N +Q ++ +MN+ V +RL + +L+ Sbjct: 548 ASMGIGIYPNGGEDPQTIFKNADTALYRAKELGRNNYQLYTESMNQKVLQRLDIENSLRR 607 Query: 551 AISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRW 610 AI + L YQPQI +TG++ G EAL RW+ P +G +PP FIP+AE+ G I IG W Sbjct: 608 AIEKEEFVLFYQPQIDIKTGKIVGFEALLRWYHPDYGLMPPMEFIPVAEDSGLIVVIGEW 667 Query: 611 VIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITE 670 V+ ACRQ +W + +SVNLSA F+ + + + + G+ L +EITE Sbjct: 668 VLETACRQNKKWIECGLEPHLISVNLSARQFQRSNIVEVIDRIRSSTGLAPELLELEITE 727 Query: 671 SMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTE 730 S M+ + + LR G+ +S+DDFGTG+S L+ L LP+ +KIDKSFV Sbjct: 728 STAMQDLSFTIDVLNQLRKKGIRVSLDDFGTGYSSLNYLRQLPIDTLKIDKSFVQDIRAN 787 Query: 731 KRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 + A+ + + S+ L+LTVVAEGVETKEQ L+K C QGY FS+PLPAEEI Sbjct: 788 SKEEAIAKTVISLAHKLDLTVVAEGVETKEQLLFLKKEKCDKAQGYLFSKPLPAEEI 844 >UniRef50_Q1K2C5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2C5_DESAC Length = 777 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 153/433 (35%), Positives = 244/433 (56%), Gaps = 12/433 (2%) Query: 363 LEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDL--VDKAVSP--VVYLIGVDHIQDVI 418 LE EK + L FD +TGL NR + + K + V LI +DH++ + Sbjct: 329 LENEK---RLYNLSNFDQLTGLTNRQEFSEQATNAMRLTKRLQQQMAVALISIDHLKVIN 385 Query: 419 DSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN--DVSNITQIADELRN 476 ++L D L E R + ++ + R+ G QF V+ N D+ +I Q+ +LR Sbjct: 386 ETLTSEVGDSLLREFSVRLSQGVRETDLVGRLSGNQFA-VAFTNIDDIQSIEQVMTKLRK 444 Query: 477 VVSKPIMIDDKPFPLTLSIGISYDLGK--NRDYLLSTAHNAMDYIRKNGGNGWQFFSPAM 534 +S+P+ I D+ +T S G+S G + + LL A++A Y+R +GGN QF++P M Sbjct: 445 KLSQPMTIGDQEMFVTSSAGLSIYPGDALSVEALLKKANSARYYVRAHGGNKHQFYAPEM 504 Query: 535 NEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRF 594 +E +K RL + L A+ ++L+L YQP++ GE + +E L RW P G V PS F Sbjct: 505 DEDIKNRLEMINGLHNALVRDELQLSYQPKVNLAEGEFHSVEVLLRWSHPTLGQVSPSDF 564 Query: 595 IPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAM 654 IP+AEE G I + WV+ +AC Q+ W+ Q + ++VN+S +S+ ++D + Sbjct: 565 IPMAEESGMIGELTLWVLRQACLQVHAWQKQGLPPIRVAVNVSGHQLQSSDFITALTDLL 624 Query: 655 HAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPV 714 + G+D L +EITES++M+ T + LR +G+ L++DDFGTG+S L+ L PV Sbjct: 625 NETGLDPQWLEIEITESVLMQSPTAAIATLNKLRKLGIHLAIDDFGTGYSSLAYLKRFPV 684 Query: 715 TEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQ 774 +KID+SF+ +R + +I +G+SL+LTV+AEGVET Q L++ +C IQ Sbjct: 685 HSLKIDRSFIKDIEQSERYATITSSIIEMGKSLHLTVIAEGVETLGQMAFLKEQNCDEIQ 744 Query: 775 GYFFSRPLPAEEI 787 G+ +S P+ A+EI Sbjct: 745 GFLYSMPVNADEI 757 >UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HTT7_9BACT Length = 860 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 158/441 (35%), Positives = 241/441 (54%), Gaps = 21/441 (4%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVID 419 E++ + L +D +TGLPNR +L L + A + + +D + V D Sbjct: 419 ERKTFENQLLYLANYDALTGLPNRIHLIERLKQAIPLAERNGQHLALLFLDLDRFKGVND 478 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN--DVSNITQIADELRNV 477 SLG+A D L+EV R ++ + R G +FV + LE + + IA+++ Sbjct: 479 SLGHASGDLLLVEVSKRLSNCVRKGDTVARFGGDEFVFL-LEGLEEREDAKPIAEKILGA 537 Query: 478 VSKPIMIDDKPFPLTLSIGIS---YDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAM 534 ++ P ID+ + SIGIS +D G++ D LL A AM Y K GN + F++P + Sbjct: 538 LNAPFEIDNVQVFMNGSIGISTWPHD-GESSDLLLRRADAAM-YRAKELGNSYAFYNPEI 595 Query: 535 NEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRF 594 + + R + L+ A+ N+ +L +QPQI TG G EAL RW P G + P +F Sbjct: 596 GALPERRFSMERELRRALERNEFELFFQPQIDLATGNCVGAEALIRWRHPEKGLILPDQF 655 Query: 595 IPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAM 654 IP+AE G I +G WVI AC L WR + L+VN+S F L + +M Sbjct: 656 IPVAESTGLIVPMGAWVIRSACPHLKSWREAGMAPLRLTVNVSVKQFERGGLIQTLESSM 715 Query: 655 HAWGIDGHQLTVEITESMMMEH----DTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLV 710 G+D L +E+TES++M+H DT ++ L MG+ +S+DDFGTG+S LS L Sbjct: 716 RESGVDSRLLEIEVTESVLMQHPMASDT-----LRELSRMGILISIDDFGTGYSSLSYLK 770 Query: 711 SLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHC 770 LPV ++KID+SFV + +LA+ AI ++G +L L +AEGVE++EQ ++LR++ C Sbjct: 771 KLPVYKLKIDRSFVTTLPVDPDMLAITTAIVTMGSALRLKTIAEGVESREQLDILRRLGC 830 Query: 771 RVIQGYFFSRPLPAEEIPGWM 791 IQGY++SRPLP + W+ Sbjct: 831 DEIQGYYYSRPLPNDTFMTWV 851 >UniRef50_B7KI79 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=4 Tax=Cyanobacteria RepID=B7KI79_CYAP7 Length = 580 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 159/439 (36%), Positives = 245/439 (55%), Gaps = 26/439 (5%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP-----VVYLIGVDHIQDVI 418 E K+++ ++ L +D +TGLPNRN N L + +D V + VD Q + Sbjct: 131 EHRKTQERLKYLNSYDHLTGLPNRNFFLNSLRECIDNNQKHSGELFAVLFLNVDRFQMIK 190 Query: 419 DSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNV 477 SLG A ++Q L+ R +E LK L R+ G +F+++ L+ D +ADE+ Sbjct: 191 YSLGQALSEQFLIATAQRLQEWLKSPHLLARMRGDEFIILLLDIKDARQALDLADEIHQA 250 Query: 478 VSKPIMIDDKPFPLTLSIGISYDLGKNRDY-----LLSTAHNAMDYIRKNGGNGWQFFSP 532 SKP +D + T SIGI LG N DY L A A + +K + + Sbjct: 251 FSKPFNLDGRVVYSTSSIGIV--LG-NIDYQNPEDFLRAADIAKHHAQKKTTSRSVLYDA 307 Query: 533 AMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPS 592 +M V ERL L L++AI N +L L YQP + ETGE+ EAL RWH P G + P+ Sbjct: 308 SMQRRVSERLQLETDLQQAIQNQELYLHYQPIVSLETGEITAFEALLRWHHPTRGLISPA 367 Query: 593 RFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPAL--SVNLSALHFRSNQLPNQV 650 FIPLAEE G I +G+W +++AC++L W+ + H+ AL SVNLS + + L Q+ Sbjct: 368 EFIPLAEETGLIIPLGQWALSQACQRLRLWQEEFPHLSALSMSVNLSGVQLSNPDLIKQI 427 Query: 651 SDAMHAWGIDGHQLTVEITESMMMEHDTE-------IFKRIQILRDMGVGLSVDDFGTGF 703 + + + G+ G L +EITES +ME+ E I K+ L++ + L +DDFGTG+ Sbjct: 428 DELLESVGLCGDSLKLEITESFLMENMIENPLAANQILKQ---LKERQIKLCIDDFGTGY 484 Query: 704 SGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFE 763 S LS L LP+ +KID+SF++ + + ++++I ++ + L L +VAEG+ET++Q Sbjct: 485 SSLSYLHHLPIDILKIDRSFLNSKTEKGKNSEIVKSIVNLAKDLGLALVAEGIETEKQLT 544 Query: 764 MLRKIHCRVIQGYFFSRPL 782 ML+++ C QGY F++PL Sbjct: 545 MLKQLQCDYGQGYLFAKPL 563 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 168/471 (35%), Positives = 260/471 (55%), Gaps = 22/471 (4%) Query: 333 ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHN 392 + I+ + G E S FI D++ E+ + +EQ D +TGL NRN L++ Sbjct: 621 LASIRDAQG-EVSHFIAIFNDVT--------ERVRYEAELEQQATHDALTGLANRNLLND 671 Query: 393 YLDDLVDKAV----SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLC 448 + + +A + V L+ +D + + DSLG+A D L E R ++ + Sbjct: 672 RMQRAIIRAARDGHAVAVMLLDLDRFKLINDSLGHAAGDALLQETARRLSASVRRGDTVA 731 Query: 449 RIEGTQFVLVSLENDVSNITQIADELRNVV---SKPIMIDDKPFPLTLSIGISY--DLGK 503 R+ G +F++V +D+S A V+ ++P++++ + T SIG+S G+ Sbjct: 732 RLGGDEFMVVM--SDMSAEDAAAALAAKVLESLAEPMLLNGREIVATGSIGVSLYPRDGE 789 Query: 504 NRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQP 563 LL A AM ++ G N +QF++P MNE + ERL L +L+ A+ N++L+L YQP Sbjct: 790 AAATLLKHADVAMYRAKELGRNRFQFYAPEMNERILERLELENSLRRALENDELELHYQP 849 Query: 564 QIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWR 623 ++ G + G EAL RW P G V P+ FIPLAEE G I IG WV+ ACRQL W Sbjct: 850 KVSLRDGRVIGAEALIRWRHPQLGMVSPADFIPLAEETGLIVPIGEWVVDHACRQLRAWL 909 Query: 624 SQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITES-MMMEHDTEIFK 682 + +++VN+SA F+ QL + ++ A+ A + QL VE+TES +M E + IF Sbjct: 910 DAGLPQISVAVNVSARQFQHEQLTHVLARALAAHRLPPGQLHVEVTESAVMCEPERTIFT 969 Query: 683 RIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITS 742 ++ L+++GV +S+DDFGTG+ L+ L P+ IKID+ FV T A+ I S Sbjct: 970 -LRELKNIGVRISLDDFGTGYCSLNYLKRFPIDSIKIDRCFVTDLATSAEDAAIALMIVS 1028 Query: 743 IGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 + SLN TV+AEGVE + Q + LR+ C +QG+ FSRPLPA E +++ Sbjct: 1029 LAHSLNQTVIAEGVENEAQLDFLRRHGCDEMQGFLFSRPLPAAEFARLLAA 1079 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 8/99 (8%) Query: 31 NDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHN-REGGKARVEGMSR 89 ++ +++ NPA GY +EV+G N LI D E +R REGG ARV Sbjct: 549 DNPIIYVNPAFTVTTGYGADEVLGRNARFLIDNDWDQPAVERLREAVREGGDARV----- 603 Query: 90 ELQLEKKDGSKIWTRFALSKV-SAEGKV-YYLALVRDAS 126 L+ KDG +W +L+ + A+G+V +++A+ D + Sbjct: 604 TLRTYHKDGQLLWNEISLASIRDAQGEVSHFIAIFNDVT 642 >UniRef50_Q21WB0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WB0_RHOFD Length = 499 Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 152/438 (34%), Positives = 243/438 (55%), Gaps = 8/438 (1%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA----VSPVVYLIGVDHIQDVID 419 E++K + + D +TGLPNR H +L + +A + V + +D+ + V D Sbjct: 60 ERKKFEESLRYQATHDELTGLPNRWLFHLHLSQALVRARRTGLRVAVLFLDLDYFRSVND 119 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLENDVSNITQIADELRNVV 478 S G+ D L++V R R L+ + L R+ G +F +L++ +V ++A +L + Sbjct: 120 SFGHTTGDALLVQVGTRIRSTLRENDTLARLGGDEFAILLADMKNVDEAVRVASKLLLSL 179 Query: 479 SKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNE 536 + D+ S+G+++ D ++ D LL A AM ++ G G+ +S M+ Sbjct: 180 QASYRLQDQDVYSGGSLGLAFYPDDAQDSDTLLRYADMAMYQAKQAGRGGYACYSQEMDL 239 Query: 537 MVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIP 596 E + L LKEA++ L+L YQPQ+ E+G + G EAL RWHDP GHV P+RFIP Sbjct: 240 RGHENMRLHTRLKEAMAQGILQLHYQPQVDVESGAIVGAEALLRWHDPELGHVSPARFIP 299 Query: 597 LAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHA 656 +AE G I + WV+ AC+Q+A W + ++VN+SA FR LP QV A+ Sbjct: 300 VAEATGLILPLSDWVLETACQQIAAWTQAGTPLR-VAVNVSAQQFRQRNLPEQVRAALAR 358 Query: 657 WGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTE 716 G L +EITES+ M + +++ L +G +++DDFGTG+S L+ L +LPV++ Sbjct: 359 TGAQAQWLDIEITESVAMTQPAQAREQLDALVGLGCRIALDDFGTGYSSLAYLKALPVSK 418 Query: 717 IKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGY 776 +KIDKSF+D + +A+ AI ++ +SL LT+VAEGVET Q LR+ C V QG+ Sbjct: 419 LKIDKSFMDGIPQDANDVAISRAIIALAKSLGLTLVAEGVETDAQLAFLRQYGCEVYQGW 478 Query: 777 FFSRPLPAEEIPGWMSSV 794 F++ + +E+ + V Sbjct: 479 LFAKAMTVQELTSRLHGV 496 >UniRef50_C5SCB7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SCB7_CHRVI Length = 811 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 232/824 (28%), Positives = 397/824 (48%), Gaps = 81/824 (9%) Query: 17 ALEQNMMGAV-LINENDE-VMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIR 74 AL ++ AV L++ +D+ ++ N AAE+L G R ++G ++ L PE + Sbjct: 10 ALIDELIDAVWLVDGSDQRLLAVNRAAEELLGQGRASLVGRSMSEL------ACTPEDLF 63 Query: 75 HNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA-EGKVYYLALVRDASVEMAQKE 133 + R + + E L ++DG+ + + +VS +G+ YLA + S A + Sbjct: 64 FWEDVAAGRGDTLLSETLLRRQDGTLVTVLRRVGRVSCPDGRCLYLACFSNQSERRAVES 123 Query: 134 QTRQLII----AVDHLDRPVIVLDPERHIVQCNRAFTEMF---GYCISEA--SGMQP--- 181 + +L+ ++ ++V D + I N+ F E++ ++E +G+ Sbjct: 124 ELEKLVAELRATLESSADGILVTDLDGAIRSFNQRFAELWRLPAALLTERNDAGIHDWMV 183 Query: 182 DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLT--RTGEKIWIK--ASISPVYDVLAH 237 +L+ + A RLQ + + + L L R E++ + A P+ V A Sbjct: 184 REVLDAEGYAA----RLQAIAQNPLLEASDLLTLRQGRVLERVTLPQYARGRPIGRVYA- 238 Query: 238 LQNLVMTFSDITEERQ--------IRQLEGNILAAMCSSPPFHEMGEIICRNI--ESVLN 287 F DIT+ R E ++ A + P F I+ N E + Sbjct: 239 -------FRDITQRLHDEQGLKLAARVFEASLDAIFVTDPEFR----IVAVNPAGERMTG 287 Query: 288 ESHVSLFALRNGMPIH-WASSSHGAEIQNAQS----WSATIRQR--DGAP----AGILQI 336 + L R + WA+ + +I+ A W I Q DG+ ++++ Sbjct: 288 LAGAELVGQRLDRSLRLWANETLDPDIRAALDRSGHWQGEIEQHHADGSTFPCLVSLMRV 347 Query: 337 KTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDD 396 + G ++ V D+S+ + A RQ IEQL D +TGLPNR L L+ Sbjct: 348 LDTEGLPFH-YVGFVKDLSETVEA--------RQRIEQLAFNDALTGLPNRLRLTERLEF 398 Query: 397 LVDKA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEG 452 ++ A V I +D + + DSLG+ + D+ L+EV R R+ L+ + R+ G Sbjct: 399 SIELARRENTRFAVLFIDIDRFKHINDSLGHVFGDRVLIEVAQRIRQCLRHVDTIARLGG 458 Query: 453 TQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLS 510 +FVL+ + +A L +++P +D F L+ SIGI+ + G+ D L+ Sbjct: 459 DEFVLLLHRVESHGAELVARRLLESMAQPFELDGLKFSLSCSIGIALYPEDGETLDDLIK 518 Query: 511 TAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETG 570 A +AM +++++G F+ MN + ER+ + A++EA+ L YQPQI +G Sbjct: 519 NADSAMYHVKEHGRGDCCFYQRQMNVGLLERVRIDHAMREALQQGHFWLAYQPQIDLVSG 578 Query: 571 ELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIP 630 + G EAL RW+DP G + P RFIP+AEE G I +G WV+ EA RQ A W++Q I + Sbjct: 579 LVIGAEALVRWNDPDLGELAPGRFIPIAEETGFIVALGGWVLREAIRQGAHWQAQGIRL- 637 Query: 631 ALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDM 690 +LSVN+SA F + ++ + G+ +L +E+TES+++++ E +R++ L + Sbjct: 638 SLSVNVSATQFHQANFIDLLAQWLDETGLPPGRLELELTESILIQNVEETLRRLENLVAL 697 Query: 691 GVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLT 750 GV L++DDFGTG+S L+ L P+ ++KID+SFV ++ A+ A+ + L L Sbjct: 698 GVRLAIDDFGTGYSSLAYLKRFPIHKLKIDRSFVCDIPHDESDTAIATAVIGLASVLKLR 757 Query: 751 VVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 V+AEGVET Q + L C QGY + PA E +++ + Sbjct: 758 VIAEGVETDIQRQFLLDAGCHEFQGYLCA---PALEPAAFLARI 798 >UniRef50_Q47HF3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q47HF3_DECAR Length = 994 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 206/706 (29%), Positives = 349/706 (49%), Gaps = 68/706 (9%) Query: 136 RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNR 195 R L +A++ + DP R+ + + +M GY + L++ + PA Sbjct: 172 RHLTLALERSGFGIWEHDPVRNRNRWSEGLRQMLGYEQEPEQLAESMNLIHPEDRPA--- 228 Query: 196 IRLQQLLWKTARDQD-----EFLLLTRTGEKIWIKASISPV-YDVLAHLQNLVMTFSDIT 249 ++ + + RD++ EF + G W+++ V +D ++ T DIT Sbjct: 229 --VEAQVTASLRDRNSILIGEFRIRHHDGGWRWVESRGRIVEFDEAGQPTLMIGTMLDIT 286 Query: 250 EERQIRQLEGNILAAMCSSPPFHEMGEIIC-----RNIESVLNESHVSLFA--------- 295 E R++ + E + LA + F +GE IC RNI + N++ ++ Sbjct: 287 E-RKLAEAE-HRLADLV----FTGIGEGICITDAKRNILRI-NDAFSTITGYQADEIVGQ 339 Query: 296 ----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPA----GILQIKTSSGAETS 345 L++G+ + I +W I R +DG+ I ++ ++G S Sbjct: 340 NPRLLKSGVHSPAFYAEIWKTIDQYGNWQGEITNRHKDGSLVTEWLSISSLRDTTGT-AS 398 Query: 346 AFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV--- 402 +I +D+S+ AA + I+ L +D +T LPNR+ DD +++A+ Sbjct: 399 HYIGIFSDLSERQAAA--------ERIQYLSSYDTLTELPNRH----LFDDRLNQALLTA 446 Query: 403 -----SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-- 455 + L+ ++ + + D+LG D+ L+EV R + +++ + R G +F Sbjct: 447 RRFERGTALILLDLNRFRLINDTLGPPAGDEILVEVTRRLKLQVREGDTVGRRAGNEFGF 506 Query: 456 VLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAH 513 V+ +L ++ + +A + + +S P + + +T SIGIS G+N + +L +A Sbjct: 507 VMANLSHERDALA-LAQRMLDAISVPFSVAGQSVAITASIGISVFPKNGENGEAMLRSAD 565 Query: 514 NAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELY 573 A+ +++G N + F+SP M+ RL + +AL++A++ ++ + YQPQ+ ++G + Sbjct: 566 AALLRAKQSGRNTFSFYSPEMDADAARRLSIESALRDALARDEFCVHYQPQVSLDSGHMI 625 Query: 574 GIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALS 633 G+EAL RW+ L G + P FIP+AEE G I IG WV+ AC Q W + ++ Sbjct: 626 GMEALLRWNSALLGPISPVEFIPIAEETGLIMQIGDWVLRTACHQTKAWLDLGLLPLHVA 685 Query: 634 VNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVG 693 VNLS FR LP QV+ A+ G+ L +EITES ++ + L+ +G+ Sbjct: 686 VNLSPRQFRQADLPAQVAHALAESGLPAGALELEITESAFIDDIDDAVAMCSKLKSLGIK 745 Query: 694 LSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVA 753 LS+DDFGTG+S L+ + P +IKID+SFV + A+ A +G+SLNL+V+A Sbjct: 746 LSLDDFGTGYSSLAYVSRFPFDKIKIDQSFVRDIVNNPVNAAIASAAIVMGRSLNLSVLA 805 Query: 754 EGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI 799 EGVET+ Q LR C IQGY FSRPLP EE + S PL I Sbjct: 806 EGVETEAQAAFLRSRRCDAIQGYLFSRPLPPEEFAPLLLSCKPLPI 851 >UniRef50_C6C4P4 Diguanylate cyclase/phosphodiesterase with MHYT sensor n=1 Tax=Dickeya dadantii Ech703 RepID=C6C4P4_DICDC Length = 678 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 155/430 (36%), Positives = 235/430 (54%), Gaps = 10/430 (2%) Query: 366 EKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA-----VSPVVYLIGVDHIQDVIDS 420 ++ + +L D +TGLPNR L L+ + A ++Y+ +D + V D+ Sbjct: 243 RQANDQLARLAMHDALTGLPNRMQLERELESCLHHARQHRQTFALMYM-DLDGFKIVNDA 301 Query: 421 LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSK 480 G+ DQ L V R RE L P L RI G +FVL+ + +AD+L + + Sbjct: 302 WGHYLGDQLLAGVTTRLREYLGPGMTLARIGGDEFVLLMRDCGEEQAAALADKLVQAIEQ 361 Query: 481 PIMIDDKPFPLTLSIGISY---DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEM 537 P +TLS+GIS D + D L+ A AM I++ G NGW F+SP+ + Sbjct: 362 PFHQSGYTLRVTLSVGISLFPRDGATSHDLRLN-ADTAMYSIKQTGRNGWIFYSPSFSHH 420 Query: 538 VKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPL 597 + L AL +A++ NQ +L YQP+ G ++G EAL RW P G + P +F+P+ Sbjct: 421 GNHQPELLQALPKALALNQFRLWYQPKYRPPNGPIHGFEALIRWQHPQKGLLLPDKFLPM 480 Query: 598 AEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAW 657 AE+ G I IG WVI EACRQL W Q +++N+S + F + L + +SDA+ + Sbjct: 481 AEKTGLIIAIGEWVINEACRQLQVWHQQGQVHWTVAINISPVQFDQHNLVSVISDALAKY 540 Query: 658 GIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEI 717 I + LT+EITES+ M + + + L +GV +S+DDFGTG+S L L LP E+ Sbjct: 541 QIPPYMLTLEITESVAMRNLEKSLNILHELDRLGVKVSIDDFGTGYSNLLSLRRLPAREL 600 Query: 718 KIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYF 777 KID++FV L + ++ I + +S+NL VVAEGVET EQ E+L ++ C +QG+ Sbjct: 601 KIDRTFVKDLLLHNKNAVVVTTIIEMARSMNLEVVAEGVETPEQQELLTRLGCYSLQGFL 660 Query: 778 FSRPLPAEEI 787 + P+P + I Sbjct: 661 LAPPMPPDHI 670 >UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ20_DESAC Length = 814 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 167/442 (37%), Positives = 247/442 (55%), Gaps = 10/442 (2%) Query: 365 QEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV----SPVVYLIGVDHIQDVIDS 420 Q +S Q +E L D +TGL NR L + LD +++ + + V LI +D Q + DS Sbjct: 365 QLQSEQRLEHLATHDELTGLANRTLLLDRLDHAIEEGMRQHHAVAVLLIDLDRFQVINDS 424 Query: 421 LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV--SLENDVSNITQIADELRNVV 478 LG+ D+ L ++ R + ++ + R+ G +F LV L N+ S I + D L+ + Sbjct: 425 LGHDQGDRLLCQIGKRLCQHVRSTDTVSRLGGDEFALVLGDLNNEESLIPLMQDLLKEI- 483 Query: 479 SKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNE 536 S P ID+ +T SIGIS + G + LL A AM +++ G+ + F+S MN+ Sbjct: 484 SSPCHIDNHHIVVTASIGISLFPNDGNDSITLLRNADLAMYQSKRHKGD-FTFYSSDMNQ 542 Query: 537 MVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIP 596 + L L L++A+ +L L YQP++ ++G++ G EAL RW PL G V P+ FIP Sbjct: 543 HAVKILELEKDLRQALERGELLLHYQPKVSLQSGKIVGCEALIRWQHPLRGLVSPADFIP 602 Query: 597 LAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHA 656 LAEE G I IG WV+ +AC+Q W+ Q + ++VNLS+ FR L + V + Sbjct: 603 LAEETGLIVPIGTWVLEQACQQAISWQQQQLPTITMAVNLSSRQFRHGNLCDVVDTILET 662 Query: 657 WGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTE 716 + L +EITESM+M+ + + L++ GV LS+DDFGTG+S L+ L PV Sbjct: 663 TTLHPDLLDLEITESMIMDDPEGAVQTMIALKERGVLLSLDDFGTGYSSLNYLRRFPVDC 722 Query: 717 IKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGY 776 +KID SF+ + A+ +I I L LT VAEGVET EQ + L K HC ++QGY Sbjct: 723 LKIDASFIRDVAQDSSSAAVAVSIVDIAHHLGLTTVAEGVETVEQLDFLEKCHCDILQGY 782 Query: 777 FFSRPLPAEEIPGWMSSVLPLK 798 +SRPLPAE+ + S L LK Sbjct: 783 LYSRPLPAEDFTSLLRSNLDLK 804 >UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Comamonadaceae RepID=A1W8G6_ACISJ Length = 756 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 150/434 (34%), Positives = 236/434 (54%), Gaps = 6/434 (1%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV---SPV-VYLIGVDHIQDVID 419 ++++ ++ I + +D +T LPNR L D + +A +P+ V + +D+ + V D Sbjct: 318 DRQRDQERIYWMAHYDALTELPNRVLLAERGQDAIRQAQESGAPLAVMFLDLDNFKHVND 377 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVS 479 SLG+ D L+E+ R R ++ + R+ G +FVL+ + ++A +++ Sbjct: 378 SLGHRIGDALLVEIAQRLRTTVRQRDTVARLGGDEFVLLLPGANAQGAARVAAKMQEAAL 437 Query: 480 KPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEM 537 +P+ I L LS+GI+ + G + + L+ +A AM + +G N ++FF+P M Sbjct: 438 QPVHIQHHELSLALSMGIALFPEHGSDFETLIQSADTAMYRAKADGRNSFRFFTPTMQAQ 497 Query: 538 VKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPL 597 L L AL+ A+ NQL L YQPQ+ TG + G+EAL RWH P G V P+ FIP+ Sbjct: 498 SARALQLTNALRRALERNQLSLHYQPQVSIATGRVCGVEALLRWHHPELGAVSPAEFIPV 557 Query: 598 AEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAW 657 AE+ G+I IG WV+ A QL W SQ + ++VNLSA+ FR QL V + + Sbjct: 558 AEDTGQILPIGEWVLRTALAQLRTWHSQGLPALTMAVNLSAVQFRQPQLLELVDRLLAEY 617 Query: 658 GIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEI 717 G+ H L +E+TE++ + + L GV LS+DDFGTG+S LS L + + Sbjct: 618 GVQPHLLELELTENVAVADPHAAIATMDQLHAKGVRLSMDDFGTGYSSLSHLKRFQIYRL 677 Query: 718 KIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYF 777 KID+SFV + A++ AI + Q+L + AEGVET Q LR+ C QG++ Sbjct: 678 KIDQSFVRDLDHDGNDRAIVSAIIRMAQALGMRTTAEGVETAHQLTFLREQGCDEAQGFY 737 Query: 778 FSRPLPAEEIPGWM 791 FSRPL A + ++ Sbjct: 738 FSRPLGAPHLQQYL 751 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 166/467 (35%), Positives = 257/467 (55%), Gaps = 24/467 (5%) Query: 333 ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHN 392 I +K G +T+ F+ ++DI+ ++Q ++ H +L D +TGLPNR L + Sbjct: 442 IAPVKDDEG-KTTHFVAAMSDIT------PMKQYETTLH--RLASHDVLTGLPNRALLQD 492 Query: 393 YLDDLVDKAV----SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLC 448 L++ + + + V L+ +D + V D++G+ D L + +R + ++ + Sbjct: 493 RLENAIAYSARNGHAVWVVLVDLDRFKFVNDTMGHQAGDVLLKIISDRLQASVRESDTVA 552 Query: 449 RIEGTQFVLVSLENDVSNITQIADELRNV---VSKPIMIDDKPFPLTLSIGISY--DLGK 503 R+ G +FVLV E +D ++ + V KP+ I F L+ S+GI+ + G Sbjct: 553 RLGGDEFVLVLPECGDGPSGYSSDVIQRIMEAVVKPLTIQGSEFFLSCSMGIAVYPNDGA 612 Query: 504 NRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQP 563 + LL+ A AM ++ G N +QF++PAMN+ ERL + L+ AI N+L L YQP Sbjct: 613 DPTTLLAHADVAMYRSKELGRNNFQFYTPAMNDQALERLRIEGELRHAIELNELVLHYQP 672 Query: 564 QIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWR 623 Q+ TG + G+EAL RW+ P+ G V P FI LAEE G I IG WV+ ACRQ W+ Sbjct: 673 QVDLHTGAIVGLEALVRWNHPILGMVQPGSFISLAEETGLIIPIGAWVLQTACRQAKAWQ 732 Query: 624 SQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKR 683 ++VNLSA F L + D + G++ L +E+TES +M +I + Sbjct: 733 DMGFTQLRIAVNLSARQFTQASLLESIKDTLQETGLEARFLEIELTESSVM---ADIERN 789 Query: 684 IQILRDM---GVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAI 740 I LRD+ GV LSVDDFGTG S L+ L P+ +KID+SFV + +++ +I Sbjct: 790 ILTLRDLKSLGVQLSVDDFGTGHSSLAYLKRFPIDTLKIDRSFVRDIAINQDDASIVSSI 849 Query: 741 TSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 S+ +L L V+AEGVET Q ++LR C IQGY+F +PLP+++I Sbjct: 850 ISLAHNLKLNVIAEGVETASQMDILRAQGCNEIQGYYFCKPLPSDQI 896 >UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIL1_9PROT Length = 576 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 156/439 (35%), Positives = 242/439 (55%), Gaps = 15/439 (3%) Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP--------VVYLIGVDHIQ 415 E+ ++ Q I ++ +D +TGLPNR L D +++A+ + I +D+ + Sbjct: 139 ERHRAEQRILEMATYDILTGLPNRA----LLKDRIERALEHGNRNRQRVALLFIDLDNFK 194 Query: 416 DVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLENDVSNITQIADEL 474 + DSLG+ D+ L V RF ++ + + R G +F VL+S + +A ++ Sbjct: 195 VINDSLGHDVGDKLLQAVAARFVSIVRGEDTVARQGGDEFIVLLSNLESAFDAEAVAQKI 254 Query: 475 RNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSP 532 N + +ID K ++ SIGIS D G++ LL + AM + +KNG N +FF P Sbjct: 255 LNALQLHFLIDGKELHISGSIGISLFPDDGEDIWTLLRNSDIAMYHAKKNGRNNCEFFKP 314 Query: 533 AMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPS 592 MN KER + AL+ A+ ++L L YQP + G+ G E L RW P G + P Sbjct: 315 EMNRQAKERHSMEVALRNALKRDELLLHYQPIVNVNGGKADGFEVLLRWQHPGDGLIYPV 374 Query: 593 RFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSD 652 +FI LAEE G I IG W++ ++C Q+ W+ Q +P L++NLSA+ FR L + Sbjct: 375 KFIRLAEETGMIIPIGEWLMRQSCLQIKAWQEQGYEVPRLAINLSAIQFRQKTLMENIVR 434 Query: 653 AMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSL 712 + G+ GH LT+EITES ++E E K ++ L ++G+ +S+DDFGTG+S LS L Sbjct: 435 ILDETGVTGHYLTLEITESELIEDVEETIKTLRQLSELGIEISIDDFGTGYSNLSFLKRY 494 Query: 713 PVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRV 772 + +KID+SFV + A+++AI + +L L V+AEGVE ++Q L C Sbjct: 495 QINTLKIDRSFVRDIPDDPDDTAIIDAILVMAHALGLQVIAEGVENEQQLAYLALHGCTR 554 Query: 773 IQGYFFSRPLPAEEIPGWM 791 QG++FS+PLPA EI M Sbjct: 555 FQGFYFSKPLPAIEIEKKM 573 >UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F127_9PROT Length = 529 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 162/484 (33%), Positives = 253/484 (52%), Gaps = 21/484 (4%) Query: 319 WSA--TIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLI 376 WS +I++ +G LQ S+ E + I A A QE S Sbjct: 53 WSGNVSIKKENGEILQGLQTTVSTTVEDGGLARYIHIIK---PADAATQEGS-------- 101 Query: 377 QFDPMTGLPNRNNLHNYL----DDLVDKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLE 432 +D T LP+RN + L ++ K V I +DH + + DS GY + L + Sbjct: 102 -YDQNTNLPDRNMFQHILAQEQENAKRKHFQLGVLYIDIDHFKVINDSFGYLKGNLLLGQ 160 Query: 433 VVNRFREKLKPDQYLCRIEGTQFV-LVSLENDVSNITQIADELRNVVSKPIMIDDKPFPL 491 V RF+ L+ + + + G +FV L++ + T + +L + ID+ + Sbjct: 161 VAERFKALLRGNDLIASLGGNRFVVLLTGLAHPEDATIVTLKLMQALESGFCIDNHEVVM 220 Query: 492 TLSIGISYDLGKNRDY--LLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALK 549 T+S GI+ G D LL +A +M ++ +GGN +QFF + RL + + ++ Sbjct: 221 TISTGIAIFPGDGDDSEALLQSAEQSMYSVKADGGNNYQFFKASTQSSAINRLNMESEMR 280 Query: 550 EAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGR 609 +AI + L YQPQI A +G + G+EAL RW P G +PP FI +AEE G I IG Sbjct: 281 KAIERGEFVLHYQPQINATSGHVVGMEALIRWQHPERGMIPPYHFISVAEETGMIVPIGE 340 Query: 610 WVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEIT 669 WV+ EACRQ W + ++VNLSA F +L ++V A+ G++ L +EIT Sbjct: 341 WVMYEACRQNKAWHDAGLAELKVAVNLSARQFSDRKLLDKVRHALKQSGLNPAFLELEIT 400 Query: 670 ESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLT 729 ES++M+ ++ + MG+ L++DDFGTG+S L+ L P+ ++KIDKSF+D ++ Sbjct: 401 ESVIMKDIEATIALLEEIASMGLSLAIDDFGTGYSSLNYLKRFPIDKLKIDKSFIDDVIS 460 Query: 730 EKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPG 789 + ++EAI + +L L V+ EGVE EQF L++ C IQGY+FS+PLPA+E Sbjct: 461 SEDDGKIVEAIIGLSHNLKLNVICEGVEDAEQFAWLQERQCNEIQGYYFSKPLPADEFEA 520 Query: 790 WMSS 793 ++ S Sbjct: 521 FVRS 524 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 262 bits (670), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 160/484 (33%), Positives = 262/484 (54%), Gaps = 23/484 (4%) Query: 312 EIQNAQSWSATI--RQRDGAP----AGILQIKTSSGAETSAFIERVADISQHMAALALEQ 365 ++ + Q W + R++DG A I ++ + G T+ ++ DI+ EQ Sbjct: 812 QLNSGQMWRGELINRRKDGTEYVELARISPLRHTDGRVTN-YLSIKEDIT--------EQ 862 Query: 366 EKSRQHIEQLIQFDPMTGLPNRNNLHN---YLDDLVDKAVSPV-VYLIGVDHIQDVIDSL 421 ++ I QL FD +TGLPN+ L + + + ++ + V + +DH +++ D+L Sbjct: 863 KQVEARIRQLAHFDLLTGLPNQTLLKDRAGFAMQMAQRSAHHLAVLFLDIDHFKNINDTL 922 Query: 422 GYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKP 481 G+ D+ L+ + R + L+ + L R G +F+LV + D +A+++ V+K Sbjct: 923 GHRIGDELLVHLAKRMKLLLRDEDTLSRFGGDEFILVLPDTDADGAAHVAEKILETVAKT 982 Query: 482 IMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVK 539 I+ +T SIGI+ G + D L +A AM +++G N ++FF+ M Sbjct: 983 CYIEQHELVVTPSIGIAMYPSDGMDFDKLYQSADVAMYRAKQDGRNNFRFFTSEMQARSA 1042 Query: 540 ERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAE 599 RL+L AL++A+S NQ +L YQPQI + G++ G EAL RW+ P G + P+ FIP+AE Sbjct: 1043 RRLLLENALRQALSRNQFELHYQPQISMQDGKIVGAEALLRWYHPELGSISPAEFIPVAE 1102 Query: 600 EIGEIENIGRWVIAEACRQLAEWRSQNIHIP-ALSVNLSALHFRSNQLPNQVSDAMHAWG 658 E G I +IG WV+ A +Q+ W+ H P +++NLSA+ FR +L V +H Sbjct: 1103 ESGLILSIGEWVLRTAVQQVKRWQDAG-HPPVTVAINLSAVQFRQARLSELVMQILHEAN 1161 Query: 659 IDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIK 718 + H + +E+TES+ M++ + L G+ +S+DDFGTG+S LS L V ++K Sbjct: 1162 LAPHWIELELTESVAMDNPLVAIGVMNDLHGCGIRMSIDDFGTGYSSLSYLRKFKVNKLK 1221 Query: 719 IDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFF 778 ID+SFV + A++ AI ++ S+ +AEGVET Q LR C +QGY+F Sbjct: 1222 IDQSFVRDLADDIESRAIVTAIITLASSMGFQTIAEGVETAGQLAFLRLQGCNEVQGYYF 1281 Query: 779 SRPL 782 SRPL Sbjct: 1282 SRPL 1285 >UniRef50_Q21XK7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21XK7_RHOFD Length = 716 Score = 262 bits (670), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 150/461 (32%), Positives = 252/461 (54%), Gaps = 13/461 (2%) Query: 345 SAFIERVADISQHMAALA--LEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDD--LVDK 400 S ++R DI ++A +++ + IE L D +TGLPNR +L +L+ L+ K Sbjct: 232 SVVLDRAGDIDFYLANFVDVSHYKETERRIEHLAHHDTLTGLPNRLHLQVFLEQSILIAK 291 Query: 401 AVSP--VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV 458 +S V + +D + + D+LG+ D L++V +R + ++ + R+ G +FV++ Sbjct: 292 RMSEQLAVVFLDLDRFKTINDTLGHPVGDDLLIQVADRLKTSVRQYDMVARLGGDEFVMI 351 Query: 459 SLENDVSNI-TQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNA 515 +D+ ++ + +A+++R +++P I SIGI+ G+ D L+ A A Sbjct: 352 LRGHDMPSVASAVAEKIRLHLNQPFQIGQHTLRTATSIGIALYPGNGERMDDLMKHADTA 411 Query: 516 MDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGI 575 M + + GGNG+ FFS MN E+L L L A+ N Q +L YQPQ+ ++ G Sbjct: 412 MYFTKSEGGNGFCFFSSDMNLHAHEKLELENLLHGALENQQFELYYQPQLSLPEQQVIGA 471 Query: 576 EALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVN 635 E L RWH P G + P+ FIPLAE +I IG WV+ ACRQ ++W + +P + VN Sbjct: 472 EVLLRWHHPEKGFISPAVFIPLAEATNQIGAIGEWVLENACRQASQWLRDGLPLPRIGVN 531 Query: 636 LSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLS 695 +S F+ L V + G+ +L +EITE+ + E + +Q LR+ G+ ++ Sbjct: 532 VSGRQFQDKNLFTLVKRVLAETGLPADRLELEITETAVTASPDEAARLLQSLRECGIMVA 591 Query: 696 VDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRIL---ALLEAITSIGQSLNLTVV 752 +DDFG G+S L +L LP+ +KID +FV R +T++ A+ A +G +L +V+ Sbjct: 592 LDDFGQGYSSLGQLRDLPIDRLKIDAAFV-RDITDEPGHPGGAIAAATIGLGHNLGFSVI 650 Query: 753 AEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 AEGVET+ Q L C +QGY+F++P+P E+ ++ + Sbjct: 651 AEGVETQAQLSFLMAHGCDEVQGYYFAKPMPREQFEAFLRA 691 >UniRef50_A8H0J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Shewanella RepID=A8H0J8_SHEPA Length = 839 Score = 262 bits (670), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 159/436 (36%), Positives = 248/436 (56%), Gaps = 10/436 (2%) Query: 365 QEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYL----IGVDHIQDVIDS 420 Q++S + ++ DP+T LPNR L+ L+ + +A L I VD + + +S Sbjct: 399 QKQSEAELAKVAFHDPLTKLPNRMALNTGLEQELKQASHSNTRLGLVYIDVDLFKQINES 458 Query: 421 LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSN--ITQIADELRNVV 478 G+ D+ LLEV RF + L R+ +F L+ L N SN + Q + LR V Sbjct: 459 YGHPVGDEVLLEVSRRFSQSLGDLVTAARLGSDEFALL-LPNIDSNDALLQQINNLRKVF 517 Query: 479 SKPIMIDDK-PFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMN 535 +P ++ + LT S+G++ D ++ LL A AM +++G N F++ ++N Sbjct: 518 DQPFILGEHGQARLTSSMGVAIYPDDAQDPSGLLVNAEIAMHRAKQDGRNNCAFYTESLN 577 Query: 536 EMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFI 595 + +L L +AL +AI N L LVYQP+I TG++ G EAL RW DP G V P+ FI Sbjct: 578 QESVAKLKLQSALHDAIELNALYLVYQPKISFVTGDVVGFEALLRWDDPAFGAVSPAVFI 637 Query: 596 PLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMH 655 PLAE+IG I++IGRWV+ AC Q WR Q ++ ++VN++ + + ++V++ + Sbjct: 638 PLAEKIGLIQDIGRWVLKRACEQGQRWREQGVNFGRIAVNVAGQQIQRSSFVDEVAETLK 697 Query: 656 AWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVT 715 G+ L +E+TES MM + + + L MGV LS+DDFGTG+S LS L LP+ Sbjct: 698 QTGLPASCLELEVTESYMMSEPELVSQDLAKLGLMGVELSIDDFGTGYSSLSYLKKLPIH 757 Query: 716 EIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQG 775 ++KID+SF+ + A+ +AI ++G +LNL VVAEGVET+ Q + L+ C QG Sbjct: 758 KLKIDQSFIAGLPLDTHNTAIAKAIIAMGHALNLKVVAEGVETQAQADFLKDNLCDHAQG 817 Query: 776 YFFSRPLPAEEIPGWM 791 YF+S+P EE+ ++ Sbjct: 818 YFYSKPKLVEELTDFL 833 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P76129 Heme-regulated cyclic di-GMP, cyclic AMP phospho... 1048 0.0 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 915 0.0 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 878 0.0 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 865 0.0 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 852 0.0 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 850 0.0 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 845 0.0 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 843 0.0 UniRef50_A9BW89 Diguanylate cyclase/phosphodiesterase with PAS/P... 836 0.0 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 836 0.0 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 836 0.0 UniRef50_Q13IZ7 Putative diguanylate cyclase(GGDEF)/ phosphodies... 832 0.0 UniRef50_D2UAD2 Hypothetical c-di-gmp phosphodiesterase or signa... 831 0.0 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 825 0.0 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 823 0.0 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 821 0.0 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 820 0.0 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 816 0.0 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 816 0.0 UniRef50_C1DIM2 Cyclic di-GMP signal transduction protein n=5 Ta... 812 0.0 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 811 0.0 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 810 0.0 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 810 0.0 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 807 0.0 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 807 0.0 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 806 0.0 UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 806 0.0 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 804 0.0 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 803 0.0 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 800 0.0 UniRef50_C1DD31 Predicted signal transduction protein containing... 800 0.0 UniRef50_C8KHS7 Putative phosphodiesterase/diguanylate cyclase n... 800 0.0 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 799 0.0 UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/P... 795 0.0 UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 791 0.0 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 789 0.0 UniRef50_C6C676 Diguanylate cyclase/phosphodiesterase with PAS/P... 788 0.0 UniRef50_Q4C8S6 PAS:GGDEF n=1 Tax=Crocosphaera watsonii WH 8501 ... 788 0.0 UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio... 788 0.0 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 786 0.0 UniRef50_B8G9I9 Diguanylate cyclase/phosphodiesterase with PAS/P... 786 0.0 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 782 0.0 UniRef50_A1SU67 Diguanylate cyclase/phosphodiesterase with PAS/P... 782 0.0 UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/P... 782 0.0 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 782 0.0 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 779 0.0 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 779 0.0 UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 776 0.0 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 776 0.0 UniRef50_A4BQ25 Putative diguanylate cyclase/phosphodiesterase (... 775 0.0 UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Maripro... 774 0.0 UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/P... 774 0.0 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 773 0.0 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 773 0.0 UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuni... 773 0.0 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 773 0.0 UniRef50_A7IPE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 772 0.0 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 770 0.0 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 769 0.0 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 769 0.0 UniRef50_Q47HF3 Response regulator receiver modulated diguanylat... 769 0.0 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 768 0.0 UniRef50_C5SCB7 Diguanylate cyclase/phosphodiesterase with PAS/P... 767 0.0 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 766 0.0 UniRef50_C4UW07 Phosphodiesterase n=1 Tax=Yersinia rohdei ATCC 4... 766 0.0 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 764 0.0 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 764 0.0 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 764 0.0 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 764 0.0 UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/P... 763 0.0 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 763 0.0 UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n... 762 0.0 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 762 0.0 UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 761 0.0 UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/P... 761 0.0 UniRef50_B2SVB0 C-di-GMP phosphodiesterase A n=11 Tax=Xanthomona... 760 0.0 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 760 0.0 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 758 0.0 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 758 0.0 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 757 0.0 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 757 0.0 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 757 0.0 UniRef50_C8QI00 Diguanylate cyclase/phosphodiesterase with PAS/P... 756 0.0 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 756 0.0 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 756 0.0 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 755 0.0 UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax... 754 0.0 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 754 0.0 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 754 0.0 UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS... 754 0.0 UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/P... 752 0.0 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 752 0.0 UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candida... 751 0.0 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 751 0.0 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 751 0.0 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 750 0.0 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 749 0.0 UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsul... 749 0.0 UniRef50_Q47FF8 Diguanylate cyclase/phosphodiesterase with PAS/P... 749 0.0 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 748 0.0 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 748 0.0 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 748 0.0 UniRef50_C1DB08 Predicted signal transduction protein containing... 747 0.0 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 747 0.0 UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermane... 746 0.0 UniRef50_Q2BPB1 Regulatory component of sensory transduction sys... 745 0.0 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 745 0.0 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 744 0.0 UniRef50_A0YYE1 Putative diguanylate cyclase/phosphodiesterase (... 743 0.0 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 743 0.0 UniRef50_Q1GXN7 Diguanylate cyclase/phosphodiesterase n=3 Tax=Pr... 742 0.0 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 742 0.0 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 741 0.0 UniRef50_A8FYM5 Signal transduction protein containing a membran... 740 0.0 UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Co... 740 0.0 UniRef50_C1D1W4 Putative diguanylate-cyclase n=1 Tax=Deinococcus... 740 0.0 UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 739 0.0 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 739 0.0 UniRef50_Q3A017 Diguanylate cyclase/phosphodiesterase with PAS/P... 739 0.0 UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 739 0.0 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 738 0.0 UniRef50_Q31NI4 Response regulator receiver modulated diguanylat... 738 0.0 UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/P... 738 0.0 UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 738 0.0 UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/P... 738 0.0 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 736 0.0 UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/P... 736 0.0 UniRef50_A0JVV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 735 0.0 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 735 0.0 UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/P... 733 0.0 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 733 0.0 UniRef50_Q47AF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 731 0.0 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 730 0.0 UniRef50_Q21WZ6 Response regulator receiver modulated diguanylat... 730 0.0 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 730 0.0 UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/P... 730 0.0 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 729 0.0 UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/P... 729 0.0 UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellula... 728 0.0 UniRef50_B6IWY2 Diguanylate cyclase, putative n=1 Tax=Rhodospiri... 728 0.0 UniRef50_B8DSE5 Diguanylate cyclase/phosphodiesterase with PAS/P... 727 0.0 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 727 0.0 UniRef50_A6QA23 Putative uncharacterized protein n=1 Tax=Sulfuro... 726 0.0 UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/P... 726 0.0 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 726 0.0 UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=... 726 0.0 UniRef50_A8VRH4 Putative uncharacterized protein n=1 Tax=Bacillu... 726 0.0 UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 726 0.0 UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/P... 726 0.0 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 725 0.0 UniRef50_A1SSA6 Diguanylate cyclase/phosphodiesterase with PAS/P... 725 0.0 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 725 0.0 UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobac... 724 0.0 UniRef50_C1DCZ4 Predicted signal transduction protein containing... 724 0.0 UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 T... 723 0.0 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 723 0.0 UniRef50_A6QAR7 Signal transduction protein n=1 Tax=Sulfurovum s... 722 0.0 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 722 0.0 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 722 0.0 UniRef50_C7RQ11 Response regulator receiver modulated diguanylat... 721 0.0 UniRef50_Q2RRN9 Sensor protein n=3 Tax=Proteobacteria RepID=Q2RR... 720 0.0 UniRef50_B1XYS1 Diguanylate cyclase/phosphodiesterase with PAS/P... 720 0.0 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 720 0.0 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 720 0.0 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 720 0.0 UniRef50_Q60A84 Sensory box protein n=1 Tax=Methylococcus capsul... 719 0.0 UniRef50_B6BGA2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 719 0.0 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 719 0.0 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 718 0.0 UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/P... 718 0.0 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 718 0.0 UniRef50_A1SZV0 Response regulator receiver modulated diguanylat... 718 0.0 UniRef50_A1S8A3 Diguanylate cyclase/phosphodiesterase with PAS/P... 718 0.0 UniRef50_C0N514 Putative uncharacterized protein n=1 Tax=Methylo... 717 0.0 UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA a... 717 0.0 UniRef50_Q2BL49 Sensory box/GGDEF domain/EAL domain protein n=2 ... 717 0.0 UniRef50_B9M6C9 Response regulator receiver modulated diguanylat... 716 0.0 UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 716 0.0 UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylat... 715 0.0 UniRef50_Q1LL50 Diguanylate cyclase/phosphodiesterase with PAS/P... 715 0.0 UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 715 0.0 UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 714 0.0 UniRef50_C6E011 Response regulator receiver modulated diguanylat... 714 0.0 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 714 0.0 UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/P... 714 0.0 UniRef50_B5ZGV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 713 0.0 UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 713 0.0 UniRef50_Q1JW15 Diguanylate cyclase/phosphodiesterase with PAS/P... 713 0.0 UniRef50_Q2Y8B4 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 713 0.0 Sequences not found previously or not previously below threshold: UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 810 0.0 UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 807 0.0 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 806 0.0 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 793 0.0 UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/P... 792 0.0 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 791 0.0 UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4... 776 0.0 UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 769 0.0 UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 ... 769 0.0 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 768 0.0 UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria... 768 0.0 UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 763 0.0 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 761 0.0 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 761 0.0 UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 757 0.0 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 757 0.0 UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 757 0.0 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 756 0.0 UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/P... 755 0.0 UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/P... 754 0.0 UniRef50_B2JAQ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 754 0.0 UniRef50_Q55576 Slr0359 protein n=2 Tax=Cyanobacteria RepID=Q555... 751 0.0 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 750 0.0 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 749 0.0 UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 748 0.0 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 748 0.0 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 746 0.0 UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 745 0.0 UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/P... 745 0.0 UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/P... 742 0.0 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 737 0.0 UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 736 0.0 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 736 0.0 UniRef50_A6UJR0 Diguanylate cyclase/phosphodiesterase with PAS/P... 736 0.0 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 735 0.0 UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 734 0.0 UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 733 0.0 UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacter... 733 0.0 UniRef50_A0YYE8 Putative uncharacterized protein n=1 Tax=Lyngbya... 732 0.0 UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 731 0.0 UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 731 0.0 UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/P... 730 0.0 UniRef50_Q118H0 Diguanylate cyclase/phosphodiesterase with PAS/P... 726 0.0 UniRef50_B1Y6A9 Diguanylate cyclase/phosphodiesterase with PAS/P... 725 0.0 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 724 0.0 UniRef50_B8GLY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 724 0.0 UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplast... 724 0.0 UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magneto... 722 0.0 UniRef50_C7RN47 Diguanylate cyclase/phosphodiesterase with PAS/P... 722 0.0 UniRef50_B4B330 Diguanylate cyclase/phosphodiesterase with PAS/P... 721 0.0 UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 721 0.0 UniRef50_B7KJT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 721 0.0 UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 719 0.0 UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/P... 718 0.0 UniRef50_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/P... 717 0.0 UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/P... 717 0.0 UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnet... 716 0.0 UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 715 0.0 UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 715 0.0 UniRef50_C6CKZ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 714 0.0 UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/P... 713 0.0 >UniRef50_P76129 Heme-regulated cyclic di-GMP, cyclic AMP phosphodiesterase, n=48 Tax=Enterobacteriaceae RepID=DOS_ECOLI Length = 799 Score = 1048 bits (2711), Expect = 0.0, Method: Composition-based stats. Identities = 799/799 (100%), Positives = 799/799 (100%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML Sbjct: 1 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA 120 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA Sbjct: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA 120 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ Sbjct: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN Sbjct: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 Query: 241 LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGM 300 LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGM Sbjct: 241 LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGM 300 Query: 301 PIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAA 360 PIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAA Sbjct: 301 PIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAA 360 Query: 361 LALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVDHIQDVIDS 420 LALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVDHIQDVIDS Sbjct: 361 LALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVDHIQDVIDS 420 Query: 421 LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSK 480 LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSK Sbjct: 421 LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSK 480 Query: 481 PIMIDDKPFPLTLSIGISYDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKE 540 PIMIDDKPFPLTLSIGISYDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKE Sbjct: 481 PIMIDDKPFPLTLSIGISYDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKE 540 Query: 541 RLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEE 600 RLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEE Sbjct: 541 RLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEE 600 Query: 601 IGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGID 660 IGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGID Sbjct: 601 IGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGID 660 Query: 661 GHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKID 720 GHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKID Sbjct: 661 GHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKID 720 Query: 721 KSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSR 780 KSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSR Sbjct: 721 KSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSR 780 Query: 781 PLPAEEIPGWMSSVLPLKI 799 PLPAEEIPGWMSSVLPLKI Sbjct: 781 PLPAEEIPGWMSSVLPLKI 799 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 915 bits (2366), Expect = 0.0, Method: Composition-based stats. Identities = 211/814 (25%), Positives = 370/814 (45%), Gaps = 44/814 (5%) Query: 18 LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNR 77 L+ G + + ++ NPAAE+L+GY+ E G ++ ++ + Sbjct: 90 LDHIADGIISFDGAGRLLSLNPAAEQLFGYQSAEATGRSLGDILAIRSTGKDNPLLTPLV 149 Query: 78 EGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQ 137 G+ E + + DGS+ +LS+V +G ++L +VRD + E+ R+ Sbjct: 150 CCGEEHSRLTC-EAEGIRSDGSRFPAALSLSRVQMKGVWHFLGIVRDVTESRETGERLRE 208 Query: 138 ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPAD 193 L + + ++ +D + NRA E+FG+ E G + E A+ Sbjct: 209 TNEKLDTLIQASPQGIVAVDCGGKVTLWNRAAVEIFGWSAEEVLGKPYP--VAPAERAAE 266 Query: 194 NRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQ 253 +R + +L E + G I + S +P+ D ++ SDI+ ++ Sbjct: 267 HRKLRELVLQGKRITDVELRRRRKDGSPIDVSLSAAPICDGSGTPLGVITIISDISARKR 326 Query: 254 IRQLEGNILAAMCSSPPFHEMGE---------IICRNIESVLNESHVSL-------FALR 297 Q + AM SS + + + E + + Sbjct: 327 NEQELVLLKRAMESSINGITITDATHPDNPIIYVNPAFERITGYGVDEVIDKNPRFLRGD 386 Query: 298 NGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAG----ILQIKTSSGAETSAFIERVAD 353 + + + + ++DG+P I ++ G + +I + D Sbjct: 387 DRDQAELKKLVQAFKEEREGCFVLRNYRKDGSPFWNELFIAPVRDRDGV-VTNYIGVMND 445 Query: 354 ISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV-----DKAVSPVVYL 408 I+ E + + + DP+TGLPNRN L + L + + V Sbjct: 446 IT--------EHRRYEEQLVYQATHDPLTGLPNRNLLQDRLGQALALEAFRRRNPICVMF 497 Query: 409 IGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNI 467 + +D+ + V D+LG+ D L V NR + L+ + R+ G ++++V +V ++ Sbjct: 498 LDLDNFKKVNDTLGHTVGDMLLKAVANRLKNCLRGGDTVARLGGDEYIIVLPNVREVPDV 557 Query: 468 TQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGN 525 +A ++ NV + P+++ +T SIGI+ G+ D LL A AM + ++ G N Sbjct: 558 ITVAKKMINVFAAPLLLMGNEIYVTASIGIALFPTDGETVDALLKNADAAMYHAKEQGKN 617 Query: 526 GWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPL 585 +QF+S MN V ERL L +L A+ N + L YQP++ G + G+EAL RW+ P Sbjct: 618 NYQFYSAEMNIRVFERLSLETSLHRAVKNQEFLLHYQPRVDLRNGRICGVEALVRWNHPE 677 Query: 586 HGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQ 645 G V P++FIPLAEE G I +G WV+ AC Q W+ + ++VNLSA FR Sbjct: 678 MGLVSPAKFIPLAEETGLIVPMGEWVLRTACAQNKAWQDAGLPPLRMAVNLSARQFRQEN 737 Query: 646 LPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSG 705 L V + + G+ L +E+TES++M+ + ++ L D G+ +++DDFGTG+S Sbjct: 738 LIAMVEEILMETGLAPQWLELELTESLVMQEAEKSAAILRELTDRGIEVAIDDFGTGYSS 797 Query: 706 LSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEML 765 LS L P+ +KID++F+ + L++ I ++ L + +AEGVE EQ + L Sbjct: 798 LSYLKRFPIANLKIDQAFIRDMTRDPDDATLVKTIITMAHGLGMKTIAEGVELAEQIDFL 857 Query: 766 RKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI 799 + C +QGY+FSRP+ AEE+ ++ L + Sbjct: 858 CRHQCEEMQGYYFSRPITAEELGRLLADGKTLDL 891 Score = 73.9 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 101/278 (36%), Gaps = 35/278 (12%) Query: 118 YLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 + L + + + +DH+ +I D ++ N A ++FGY +EA+ Sbjct: 66 IIWLSIVRPLRSVAFTASLHTDLLLDHIADGIISFDGAGRLLSLNPAAEQLFGYQSAEAT 125 Query: 178 GMQPDTLLNIPEFPADNRI--RLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL 235 G +L I DN + L + +R E + G + S+S V + Sbjct: 126 GRSLGDILAIRSTGKDNPLLTPLVCCGEEHSRLTCEAEGIRSDGSRFPAALSLSRVQ--M 183 Query: 236 AHLQNLVMTFSDITEERQ----IRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHV 291 + + + D+TE R+ +R+ + + +SP + C ++ N + V Sbjct: 184 KGVWHFLGIVRDVTESRETGERLRETNEKLDTLIQASPQGIVAVD--CGGKVTLWNRAAV 241 Query: 292 SLFALRN----GMPIHWASSSHGAE--------IQNAQSWSATI--RQRDGAPAGIL--- 334 +F G P A + AE +Q + + R++DG+P + Sbjct: 242 EIFGWSAEEVLGKPYPVAPAERAAEHRKLRELVLQGKRITDVELRRRRKDGSPIDVSLSA 301 Query: 335 QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHI 372 I ++DIS ++++ Q + Sbjct: 302 APICDGSGTPLGVITIISDISA--------RKRNEQEL 331 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 878 bits (2269), Expect = 0.0, Method: Composition-based stats. Identities = 205/815 (25%), Positives = 363/815 (44%), Gaps = 59/815 (7%) Query: 15 FPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIR 74 ALE++ + + +E + + N +L + REE+IG + +++ HP Sbjct: 12 LSALEESSV-ISITDEKGIITYVNHNFCQLSKFNREELIGKSHNIV----DSGFHPRNYF 66 Query: 75 HNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLALVRDASVEMAQK 132 + +R + E++ KDG++ W L + Y+A+ D + + Sbjct: 67 KSLWDTISRGKVWKGEMKNRGKDGTEYWLSMTLVPFMNDSGFLYQYVAIGTDITKRKLME 126 Query: 133 EQT----RQLIIAVDHLDRP--VIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 E + L + LD V + D + I N F E+ Y + E G ++N Sbjct: 127 ESLAKTMKDLHDIKNALDESSIVAITDDKGVITYVNDKFCEISRYEVDELVG-NTHRVIN 185 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 + + + + + E + G + W+ +I P D V + Sbjct: 186 SRYHSKSFFKLMWETIKQGRVWKGEVKNRAKDGTEYWMNTTIVPFLDDRGVPYQYVSIRT 245 Query: 247 DITEERQIRQLEGNILA-----------------------AMCSSPPFHEMGEIICRNIE 283 DIT+ + L + + ++ E + E Sbjct: 246 DITDRIEAETALAEALQNDFRRTVQNLQNCVFKIVTDQRGNITYTLCEGKIAEELGLTSE 305 Query: 284 SVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAE 343 +L ++ +F + S+ +S + ++ G I E Sbjct: 306 RMLRKTSYEIFPYE----VAEQMESYFRRAFAGESVTFELKL-SGNDYYITLSPIEENGE 360 Query: 344 TSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS 403 + + DI+ E++K+ + I + +D +T LPNR H L + + KA Sbjct: 361 IVEMVGSMIDIT--------ERKKAEETIRYMAHYDSLTNLPNRTLFHEKLAEAMLKAKQ 412 Query: 404 ----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVS 459 V I +D +++ D+LG++ D L V NR L+ + + R+ G +F + Sbjct: 413 KDEKIGVMFIDLDRFKNINDTLGHSIGDVLLQAVANRLICCLRKEDSVSRLGGDEFAIFL 472 Query: 460 LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMD 517 +IA + +S+ I +D +T SIGIS D G + + LL A AM Sbjct: 473 TGVTHREAGEIAQRIITSMSESITLDHIEIFITPSIGISMYPDDGDDIEALLKHADAAMY 532 Query: 518 YIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEA 577 ++ G N +QFFS +++++ ++L L L++A+ Q L YQP+I +TG++ G+EA Sbjct: 533 LAKEQGKNNYQFFSEELHQVLAKKLQLERELRKALDEKQFTLHYQPKIHLQTGQIIGMEA 592 Query: 578 LARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLS 637 L RW P G +PP +FIP+AEE G I +G WV+ AC+Q W+ A++VN+S Sbjct: 593 LIRWDHPDLGLIPPIQFIPIAEETGLIVPLGEWVMRTACQQTKAWQEAGFTQLAVAVNIS 652 Query: 638 ALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVD 697 F N L ++ + G+ L +EITESM + + + + L+ +GV +S+D Sbjct: 653 LRQFMQNNLIEMITSILEETGLAPQYLELEITESMAL-NVDYTIRILNRLKALGVSISID 711 Query: 698 DFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVE 757 DFGTG+S LS L P+ +KID+SF+ + A+++ I + ++ + V+AEGVE Sbjct: 712 DFGTGYSSLSYLSQFPIDRLKIDQSFLRNL--NPQNQAIIKTIIHMAHNMKIAVIAEGVE 769 Query: 758 TKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 T E + L++ C +QGYF+S+PLP +EI ++ Sbjct: 770 THEHVDFLKEQLCNEVQGYFYSKPLPTKEIDSFLQ 804 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 865 bits (2235), Expect = 0.0, Method: Composition-based stats. Identities = 231/853 (27%), Positives = 385/853 (45%), Gaps = 64/853 (7%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 ++ D +G+ LE+ + G VLIN + NPA +++GY+R+E++G N+ +L+P Sbjct: 11 MSRYDTLNEGVLRAVLEEMVDGVVLINRLGIIREVNPAVTRIFGYERKEMLGANVSLLVP 70 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALV 122 R H +Y+R+ + G+ R+ G+ R + ++KDGS A+S+V A G+ + +V Sbjct: 71 SPDRERHDQYLRNYLQTGEGRIIGVGRTVHGQRKDGSLFPMELAVSEVKAGGEHLFAGIV 130 Query: 123 RDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPER---HIVQCNRAFTEMFGYCISEASGM 179 RD S + A+D + + D + I N AF ++ G + G Sbjct: 131 RDISERHQFHQTLALFRRAMDSAYNGIAIADVDAEGERISYANAAFAQITGIPAVDLLGR 190 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 TLL + + + G W ++SP+++ + Sbjct: 191 SL-TLLACEGEDGQTCTAMVSQMRTGGSMRRTLRCQRPDGSLFWNDVTLSPIFNERGEIS 249 Query: 240 NLVMTFSDITEERQIRQLEGNILAAM-----CSSPPFHEMGEIICRNIE---SVLNESHV 291 + +D T ++ Q A+ + E+ + R IE V + + Sbjct: 250 QCIAVLADATALKESEQALRRSRDALERQVEARTENLTEVVRQLRREIEERTRVESALRL 309 Query: 292 SLFALRNGMPIHWASSSHGAEIQNAQSWSATI--------------------------RQ 325 S L N I WSA + RQ Sbjct: 310 SEQRLANAQRIARLGHWEWEIATGRLYWSAEVYNLLGLGPEFTTPDYERFLEMIPGDDRQ 369 Query: 326 R----------DGAPAGI---LQIKTSSGAETSAFIERVAD------ISQHMAALALEQE 366 R G P I + S E V D + + A E+ Sbjct: 370 RLQEAIARCLEHGLPYEIDHRITCPDGSERILHEDGELVYDDEGKPLLLRGTAQDITERH 429 Query: 367 KSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLG 422 + + L FDP+TGLPNR + L + A + + +D ++V DSLG Sbjct: 430 DYQNRLRHLANFDPVTGLPNRTLFKDRLQHALANATRNQRLVALLFLDMDQFKNVNDSLG 489 Query: 423 YAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL-ENDVSNITQIADELRNVVSKP 481 + D+ L + R ++ + R G +F+++ + A+ + + +P Sbjct: 490 HMMGDELLRQTAERLLGCVREGDTVARFGGDEFIILLENIEHSEQASLSAERVVQAMRRP 549 Query: 482 IMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVK 539 + + +SIGIS + ++ + L+ A +AM + GG G++F++P MN Sbjct: 550 FRLGEHEHFCNVSIGISLYPEDDEHPEDLVRHADSAMYLAKAQGGAGYRFYTPDMNTRAM 609 Query: 540 ERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAE 599 ERL+L L +A+ Q ++ YQPQ+ +G + G+EAL RW P G VPP+ FIP+AE Sbjct: 610 ERLLLQNQLHQALELGQFQVHYQPQMDLRSGRICGVEALVRWQHPERGLVPPAEFIPMAE 669 Query: 600 EIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGI 659 + G IE +G WV+ A R++ W+ + + LSVNLS FR LP V + G+ Sbjct: 670 DTGLIEPLGEWVLRTAAREVRGWQDRGLPALNLSVNLSPRQFRHPDLPGMVERVLAESGL 729 Query: 660 DGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKI 719 + +L +EITE +++ + + +GV +S+DDFGTG S L+ L LPV +KI Sbjct: 730 EAERLELEITERLIIVDLEHTVDTLSRIARLGVRVSIDDFGTGHSSLAYLKRLPVHALKI 789 Query: 720 DKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFS 779 D+ FVD + A+ EA+ ++G++L L V+AEGVET+EQ LR+ C +QG+F + Sbjct: 790 DREFVDGIGQDSDDAAIAEAVIALGRTLRLQVIAEGVETREQASFLREHGCDAVQGFFIA 849 Query: 780 RPLPAEEIPGWMS 792 RP+PA E+ GW+S Sbjct: 850 RPMPAGELTGWLS 862 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 852 bits (2203), Expect = 0.0, Method: Composition-based stats. Identities = 214/816 (26%), Positives = 370/816 (45%), Gaps = 54/816 (6%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 A+EQ+ + V+ N N E+ + NP+ ++ GY R E IG N +L + + Sbjct: 597 LLQAVEQSPVAIVITNRNAEIEYVNPSFTRVTGYSRLEAIGQNPRILQSGEAPSDTYRSL 656 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRDASVEMAQ 131 GK + +K+G W + +++ + + +YLA+ D + + Sbjct: 657 WQTLLEGKV----WTGLFHNRRKNGELFWEKASIAPIIGDHGEVTHYLAVKEDVTERLRA 712 Query: 132 ----KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY-CISEASGMQPDTLLN 186 +E + P+++L + + CNRA E+ GY ++ G + Sbjct: 713 DKLLQESEEAFRRLFEDAKDPLLLL-KDGSFIDCNRATLELLGYGSKAQLLGRDAADISP 771 Query: 187 IPEFPAD----NRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 + L + + E+ G + ++ +++P+ + + Sbjct: 772 ARQPDGQASGEKAAALIAAALRIGYHRFEWTHQRADGSPVPVEVTLTPIT-LRGEVILH- 829 Query: 243 MTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIE------SVLNESHVSLFA- 295 + DI+E R + AA S + + R +E + + + Sbjct: 830 TLWRDISERRVTETRLRLLAAAFEHSAEAIMVSDRDNRILEVNDAFCRLTGYAADEVRGS 889 Query: 296 ----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGA----PAGILQIKTSSGAETS 345 L +G + I + W + R++DG+ I I+ + G T Sbjct: 890 DPRLLSSGRTSAEEYRTMWQAINSTGHWQGEVWDRRKDGSYYPKWLSISTIRGAEGN-TE 948 Query: 346 AFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS-- 403 +I DIS E++ + + I L FD +T LPNR+NL LD + A Sbjct: 949 YYIGSFVDIS--------ERKAAEEKISHLAHFDTLTDLPNRSNLQGRLDQALASARREG 1000 Query: 404 ----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVS 459 V + +D +++ D+LG+ D LLEV R R ++ + R+ G +FV+V Sbjct: 1001 HGRSVAVMFLDLDRFKNINDTLGHHVGDALLLEVAARLRSSVRDSDVVARLGGDEFVVVL 1060 Query: 460 LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMD 517 D ++A ++ +S+ I+ T SIGI+ G++ + L+ A AM Sbjct: 1061 TGADALAAERVAGKILKALSRAYQIEGHALHSTSSIGIAVFPADGESVEVLMQNADAAMY 1120 Query: 518 YIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEA 577 + + G N QFF+ +MNE +R L L A+ Q L YQPQ+ A+ ++ +EA Sbjct: 1121 HAKSAGRNNVQFFTASMNEAASDRRQLEEDLHLALQQKQFVLHYQPQVDAQ-RRVFAVEA 1179 Query: 578 LARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWR-SQNIHIPALSVNL 636 L RW P HG VPP+RF+PLAE+ G I IG+WV+ AC Q+ W ++VN+ Sbjct: 1180 LLRWQHPHHGLVPPARFVPLAEDTGLIVPIGQWVLETACAQIKAWSVDARTRKLQVAVNV 1239 Query: 637 SALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSV 696 SA FR + A+ G + +L +E+TES+++++ + ++ ++ +GV S+ Sbjct: 1240 SARQFRQPDFVELLRQAIDNSGANPARLKLELTESLVLDNVADTIDKMNAIKLLGVTFSM 1299 Query: 697 DDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGV 756 DDFGTG+S LS L LP+ ++KID++FV R + + + I ++G+SL L VVAEGV Sbjct: 1300 DDFGTGYSSLSYLTRLPLDQLKIDRAFVCRLPENRSDAVIAQTIVTMGRSLGLKVVAEGV 1359 Query: 757 ETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 ET+ Q + L C QG+ FSRPL + ++ Sbjct: 1360 ETEAQRQFLDSHGCDGYQGFLFSRPLAVDAFEDFLQ 1395 Score = 152 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 75/375 (20%), Positives = 129/375 (34%), Gaps = 21/375 (5%) Query: 18 LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNR 77 L ++G V + V+ N E+++GY E+IG + + P E I Sbjct: 480 LGNALVGIVHL-RQRCVVSCNRRLEEIFGYAPGELIGKSSQVFYPSIEVF---EKIGARA 535 Query: 78 EGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS-AEGKVYYLALVRDASVEMAQKEQTR 136 A S EL L +KDGS W + ++ + + D S +E++R Sbjct: 536 YAVVAENRNFSGELTLRRKDGSLFWGALTGRAIDPSQPHAGSIWVFADISERREAEEESR 595 Query: 137 QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRI 196 L+ AV+ +++ + I N +FT + GY EA G P +L E P+D Sbjct: 596 NLLQAVEQSPVAIVITNRNAEIEYVNPSFTRVTGYSRLEAIGQNP-RILQSGEAPSDTYR 654 Query: 197 RLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEE----- 251 L Q L + F + GE W KASI+P+ + + + D+TE Sbjct: 655 SLWQTLLEGKVWTGLFHNRRKNGELFWEKASIAPIIGDHGEVTHYLAVKEDVTERLRADK 714 Query: 252 --RQIRQLEGNILAAMCSSPPFHEMGEII--CRNIESVLNESHVSLFALRNGMPIHWASS 307 ++ + + + G I R +L + R+ I A Sbjct: 715 LLQESEEAFRRLFEDAKDPLLLLKDGSFIDCNRATLELLGYGSKAQLLGRDAADISPARQ 774 Query: 308 SHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAET------SAFIERVADISQHMAAL 361 G + R G + + G+ + R I + Sbjct: 775 PDGQASGEKAAALIAAALRIGYHRFEWTHQRADGSPVPVEVTLTPITLRGEVILHTLWRD 834 Query: 362 ALEQEKSRQHIEQLI 376 E+ + + L Sbjct: 835 ISERRVTETRLRLLA 849 Score = 63.5 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 76/253 (30%), Gaps = 19/253 (7%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 LV A E+ ++ + + + + ++ N A M A Sbjct: 332 LVERDRQLRANSERLEIFQRLAENAGQGIGMAQLDGSLLYANPALRRMIDMPQGAACSDY 391 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 E + + +L + E L + +G ++ V++ Sbjct: 392 SFKQFYSREEANRLQHAVLPMLLPAGQWTGEIELRSLSGRTTPAIHTLFVVHNTADEPPV 451 Query: 241 LVMTFSDITEERQIRQLEGNILAAMCS-----------------SPPFHEMGEIICRNIE 283 + +DI+E +++ + +LA M + + EI Sbjct: 452 IATVLADISERKEMEERNRQLLAEMETLLGNALVGIVHLRQRCVVSCNRRLEEIFGYAPG 511 Query: 284 SVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAG-ILQIKTSSGA 342 ++ +S + A + S T+R++DG+ L + + Sbjct: 512 ELIGKSSQVFYPSIEVFEKIGARAYAVVAENRNFSGELTLRRKDGSLFWGALTGRAIDPS 571 Query: 343 ETSA-FIERVADI 354 + A I ADI Sbjct: 572 QPHAGSIWVFADI 584 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 850 bits (2196), Expect = 0.0, Method: Composition-based stats. Identities = 222/833 (26%), Positives = 373/833 (44%), Gaps = 63/833 (7%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 ++L A ++ + ++ + + + N EKL GY E++G +I+ L Sbjct: 10 IRLEQALRTSEARLHSFFDATPDALLISDAHGTITMANQQVEKLLGYVAAELVGKSIEDL 69 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA 120 +P + +HP +AR G ++ +KDGS+ +LS++ + +++ + Sbjct: 70 VPNRFKASHPVLRSEFTASPRARRMGNGMAVKARRKDGSECDVDVSLSRIETDEGMFFAS 129 Query: 121 LVRDASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 +RD S ++E+ R+ L + + D + +V N F + Sbjct: 130 ALRDISERKRKEEELRRQNGVLSTIFQSFPGGITLFDADLRLVAFNDQFKALLDL----- 184 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTAR---DQDEFLLLTRTG-------EKIWIKA 226 PD L PE + IR + +Q ++ RT E++ Sbjct: 185 ----PDVLFEQPEPDFETLIRYNAARGEYGPGDPEQQVAAIIARTKKFVPHKIERVRPDG 240 Query: 227 SISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPP--FHEMGEIICRNIES 284 + + V + ++DIT+ +Q + AA S + +I R + Sbjct: 241 TSLSIRGVPLASGGFLSIYTDITDRKQSEEQLRIAAAAFESQTCMIITDANRVIQRVNRA 300 Query: 285 VLNESHVSLFALRNGMPIHWASSSHGAE--------IQNAQSWSATI--RQRDGA----P 330 + + S P S HGA+ I +W I R+++G Sbjct: 301 FIETTGYSAEEAVGQTPRLLQSGRHGADFYREMWETIHRTGAWQGEIWGRRKNGEVYPKW 360 Query: 331 AGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNL 390 I + ++G S +I DI+ E++K+ + I L FD +TGLPNR L Sbjct: 361 LSISAVVGTNGR-VSHYIGTHNDIT--------ERKKAEERINALAFFDQLTGLPNRTLL 411 Query: 391 HNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQY 446 + L + + + I +D+ + + D+LG+ DQ L +V R ++ Sbjct: 412 LDRLKQTILSSGRSDSHGALLFIDLDNFKTLNDTLGHDVGDQLLKQVALRLTHCVRDGDT 471 Query: 447 LCRIEGTQFVLVSLEND------VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD 500 + R+ G +FV+V + + +A+++ +++ + + SIG + Sbjct: 472 VARLGGDEFVVVLANLNTNDKEAAQDTETVAEKILATLNQTYQLGHVTHHSSASIGATLF 531 Query: 501 LGK--NRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLK 558 G D L+ A +M + G N +FF P+M VK R + L A++ Q Sbjct: 532 KGPLIPIDDLMKQADLSMYKAKAAGRNAVRFFDPSMEIAVKVRAEMEDDLLRALAEKQFL 591 Query: 559 LVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQ 618 L YQ Q+ E L G E L RW P G V P+ FIPLAEE G I +G WV+ AC Q Sbjct: 592 LHYQAQMVGE--RLTGAEVLLRWQHPQRGMVSPAEFIPLAEETGLILPLGHWVLETACTQ 649 Query: 619 LAEWRSQN-IHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHD 677 LA+W + + L+VN+SA FR N +QV + G + +L +E+TES+++E+ Sbjct: 650 LAQWAGRPEVAHLTLAVNVSAHQFRQNDFVDQVLGVLEKTGANPQRLKLELTESLLVENV 709 Query: 678 TEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALL 737 +I ++ L+ GVG S+DDFGTG+S LS L LP+ +KID+SFV LT+ ++ Sbjct: 710 EDIIDKMAALKHRGVGFSLDDFGTGYSSLSYLKRLPLDHLKIDQSFVRDVLTDSNDASIA 769 Query: 738 EAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 I ++ SL L V+AEGVET+ Q + L C QGY+FSRPLP E+ + Sbjct: 770 RTIVALANSLGLGVIAEGVETEAQRDFLASSGCHTYQGYYFSRPLPIEDFESF 822 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 845 bits (2183), Expect = 0.0, Method: Composition-based stats. Identities = 204/802 (25%), Positives = 352/802 (43%), Gaps = 44/802 (5%) Query: 29 NENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMS 88 + + ++F + ++L GY E++G + P +R E + + Sbjct: 113 DADWTMVFVSDGCQELSGYASSEILGKT-GVSWEEITHPQDRGRVRACIEDAIGSGQRFA 171 Query: 89 RELQLEKKDGSKIWT-------RFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIA 141 + ++ K G W R L + EG + +++ R + EQ + Sbjct: 172 VQYRIVCKSGQVKWVIERGVAIRDELDESVIEGFIEDISVRRTTLEALEAAEQ--RYRNI 229 Query: 142 VDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQL 201 +H + + H + N A +++GY ++A + + R L Sbjct: 230 FEHASEGIFQSTRDGHYLAANPALAKLYGYDNAQALMTDLADIERRLYVQPNRREEFLTL 289 Query: 202 LWKTARD-QDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIR---QL 257 + K E + R G +IWI + V+ T DI+E ++ QL Sbjct: 290 IEKNGAILNFESEVYRRDGSRIWISENAHVVFGPQGEFICYEGTVQDISERKRTEAHLQL 349 Query: 258 EGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSS--------H 309 + + + + I + + + P ++ + Sbjct: 350 MAMVFSNSNEAIIVTDASNRIIATNPAFTCLTGYQPDDVIGKNPRILSAGTTPTEVFSDM 409 Query: 310 GAEIQNAQSWSATI--RQRDGA----PAGILQIKTSSGAETSAFIERVADISQHMAALAL 363 + +W + R+++G I ++ G + I DIS Sbjct: 410 WTCLHREGAWQGELWDRKKNGEAYPKWLSISLVRDEDG-QIRNHIGSFIDIS-------- 460 Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV----DKAVSPVVYLIGVDHIQDVID 419 E + +++ I L D +T L NR +LH L + + + LI +D + + D Sbjct: 461 ELKATQERIRHLAHHDTLTNLANRFSLHEKLAQALAFCKRNRMQLALMLIDLDRFKTIND 520 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVL-VSLENDVSNITQIADELRNVV 478 +LG+ D+ L++V R ++ + R+ G +FV+ + ++ +AD++ + Sbjct: 521 TLGHQAGDELLVQVAKRLSHAVRESDIVARLGGDEFVIALPGIGSPADAAHLADDITREI 580 Query: 479 SKPIMIDDKPFPLTLSIGISYDLGKNRD--YLLSTAHNAMDYIRKNGGNGWQFFSPAMNE 536 S P +I + + SIGI G + LL A AM + + NG +QFF+ MN Sbjct: 581 SAPYLIKGQELRTSPSIGICVYPGDGSEIGDLLKNADVAMYHAKANGRGNYQFFTEDMNI 640 Query: 537 MVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIP 596 ER+ L + L+ AI+ + L YQPQ+ +G + G+EAL RW P G V P+ FIP Sbjct: 641 ATTERMCLESDLRLAITRREFLLHYQPQLDLRSGTIVGVEALIRWQHPTRGLVSPADFIP 700 Query: 597 LAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHA 656 +AEE G I IG WV+ EACRQL W+++ I +S+NLSA F LP ++ + + A Sbjct: 701 IAEESGMIAAIGDWVLEEACRQLKVWQNRGITHLRMSINLSAGQFLDKTLPARIHELLAA 760 Query: 657 WGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTE 716 + +L +E+TESM M E ++ L G+ LS+DDFGTG+S L+ L LP+ Sbjct: 761 NDLSADRLDLEVTESMSMASPDESISVMKTLSSSGLTLSIDDFGTGYSSLAYLKLLPIHT 820 Query: 717 IKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGY 776 +KID+SFV ++ + + + L L VVAEGVET+ Q + L I C +QGY Sbjct: 821 LKIDRSFVKDIESDPNDADICDVTVLLAHKLGLEVVAEGVETEAQLKFLLSIGCEKVQGY 880 Query: 777 FFSRPLPAEEIPGWMSSVLPLK 798 S+PLPA++ ++ + P+K Sbjct: 881 LISKPLPADQAERFIRNNPPMK 902 Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats. Identities = 70/371 (18%), Positives = 133/371 (35%), Gaps = 20/371 (5%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 +A AA+ + E G + + NPA KL+GY + + ++ + Sbjct: 217 EALEAAEQRYRNIFEHASEGIFQSTRDGHYLAANPALAKLYGYDNAQALMTDLADI--ER 274 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWT--RFALSKVSAEGKVYYLALV 122 P + ++ E ++ ++DGS+IW + + Y V Sbjct: 275 RLYVQPNRREEFLTLIEKNGAILNFESEVYRRDGSRIWISENAHVVFGPQGEFICYEGTV 334 Query: 123 RDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPD 182 +D S + + + + + + +IV D I+ N AFT + GY + G P Sbjct: 335 QDISERKRTEAHLQLMAMVFSNSNEAIIVTDASNRIIATNPAFTCLTGYQPDDVIGKNP- 393 Query: 183 TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 +L+ P + + L + Q E + GE SIS V D ++N + Sbjct: 394 RILSAGTTPTEVFSDMWTCLHREGAWQGELWDRKKNGEAYPKWLSISLVRDEDGQIRNHI 453 Query: 243 MTFSDI-----TEERQIRQLEGNILAAMCSSPPFHEMGE---IICRNIESVLNESHVSLF 294 +F DI T+ER + L + + HE C+ L + L Sbjct: 454 GSFIDISELKATQERIRHLAHHDTLTNLANRFSLHEKLAQALAFCKRNRMQLALMLIDLD 513 Query: 295 ALRNGMPIHWASSSHGAEIQNAQSWSATIRQRD-----GAPAGILQIKTSSGAETSAFIE 349 + + +Q A+ S +R+ D G ++ + +A + Sbjct: 514 RFKTINDTLGHQAGDELLVQVAKRLSHAVRESDIVARLGGDEFVIALPGIGSPADAAHLA 573 Query: 350 RVADISQHMAA 360 DI++ ++A Sbjct: 574 --DDITREISA 582 Score = 65.5 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 96/306 (31%), Gaps = 40/306 (13%) Query: 100 KIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVI---VLDPER 156 I+ ++ +S V++ + ++ S +++ + + + D + Sbjct: 57 TIFAELSIIYISNPITVHFRPIRQNHSGATPSPLNHSRVLDTLVKNLEGMAYRCLHDADW 116 Query: 157 HIVQCNRAFTEMFGYCISEASGMQ--PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLL 214 +V + E+ GY SE G + P+ R ++ + R ++ + Sbjct: 117 TMVFVSDGCQELSGYASSEILGKTGVSWEEITHPQDRGRVRACIEDAIGSGQRFAVQYRI 176 Query: 215 LTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER----QIRQLEGNILAAMCSSPP 270 + ++G+ W+ + D L + DI+ R + E + Sbjct: 177 VCKSGQVKWVIERGVAIRDELDESV-IEGFIEDISVRRTTLEALEAAEQRYRNIFEHASE 235 Query: 271 FHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQ---------------- 314 + N + L+ N + + + Sbjct: 236 GIFQSTRDGHYL--AANPALAKLYGYDNAQALMTDLADIERRLYVQPNRREEFLTLIEKN 293 Query: 315 -NAQSWSATIRQRDGAPAGILQ---IKTSSGAETSAFIERVADISQHMAALALEQEKSRQ 370 ++ + + +RDG+ I + + E + V DIS E++++ Sbjct: 294 GAILNFESEVYRRDGSRIWISENAHVVFGPQGEFICYEGTVQDIS--------ERKRTEA 345 Query: 371 HIEQLI 376 H++ + Sbjct: 346 HLQLMA 351 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 843 bits (2179), Expect = 0.0, Method: Composition-based stats. Identities = 229/814 (28%), Positives = 386/814 (47%), Gaps = 53/814 (6%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 +E ++ + + +N AE++WGY EE+IG + +L P + + + Sbjct: 163 LAAIVESTGDTVIVSDLQGRIRTWNKGAERMWGYAAEEIIGQPVTVLPPLAKQGEPGQIL 222 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSK-VSAEGKV-YYLALVRDASV---- 127 R + E + E + KDG +S AE ++ A++RD + Sbjct: 223 RRVID----EHEVVRFESRGLHKDGRDFPISLTVSPLFDAENRLTGVSAIIRDITEMERL 278 Query: 128 EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI 187 + +E+ + + + + ++VLDP+ + ++ N A+ ++E G L Sbjct: 279 KATLQERLKLVEMVFQYSVSCLVVLDPQFNFIRVNPAYARACRRDVAEFEGRNHFEL--- 335 Query: 188 PEFPADNRIRLQQLLWKTARDQDEFLLLT-----RTGEKIWIKASISPVYDVLAHLQNLV 242 +P+D R ++++ + T G W ++ PV D ++ L+ Sbjct: 336 --YPSDARFIFEEVVRTRRPFEAVARPFTFPDQPERGVTYW-DWNLVPVLDGKGEVEYLL 392 Query: 243 MTFSDITEERQIRQLEGNILAAMCSSPP---FHEMGEIICRNIESVLNESHVSLFALRNG 299 + D+T+ ++ I A + + I R + + S + Sbjct: 393 FSLVDVTDRQKATAQLRLIETAFQHTRDAVLITDARARILRVNPAFETITGYSAGEVVGR 452 Query: 300 MPIHWASSSH--------GAEIQNAQSWSATI--RQRDG----APAGILQIKTSSGAETS 345 P S H ++ WS I R RDG A + +K G+ T+ Sbjct: 453 TPRMLQSGRHDGAFYRRFWRALETEGHWSGEIWNRHRDGHIFPAWQSVSAVKGPDGS-TT 511 Query: 346 AFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS-- 403 ++ DIS E +++ I L D +TGLPNR LD L++ A Sbjct: 512 HYVSIFTDIS--------EFKRAEAQIRYLSYHDDLTGLPNRAYFQARLDQLIEAAARDR 563 Query: 404 --PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE 461 + ++ +D + + DSLG++ D+ L +V R ++ ++ R G +FV++ + Sbjct: 564 KQIALVVLDLDRFKTINDSLGHSVGDELLCQVAERIQDCTGQGDFVARQGGDEFVVILAD 623 Query: 462 NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYI 519 +D ++A+ + + ++KP + + +T S+GIS + + L+ +A AM + Sbjct: 624 SDAVRAARVANAMISAIAKPAVAGGRTLIVTPSLGISLYPHDAGDSESLIKSADAAMYHA 683 Query: 520 RKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALA 579 + G N +QFFS M+ + ERL L AL +A+SN + +L YQPQI + L G+EAL Sbjct: 684 KSLGRNTYQFFSAEMSAVATERLALENALHQALSNGEFRLYYQPQIEVCSRRLIGLEALI 743 Query: 580 RWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSAL 639 RW P G VPP RFIPLAEE G I IGRWV+ EACRQ EW++ + I ++VNLS L Sbjct: 744 RWRHPEVGWVPPLRFIPLAEETGIIHRIGRWVLEEACRQQREWQAAGLCIVPVAVNLSPL 803 Query: 640 HFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDF 699 + + P QV + + L +E+TE+ +M + ++ L++ G S+DDF Sbjct: 804 QLQKDDFPEQVEALLSGCRLAPGLLELELTETAVMRDVGRMSDMLRKLKERGTRFSIDDF 863 Query: 700 GTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETK 759 GTG+S L L PV ++KID+SF+ + A+ AI ++ + L+L VVAEGVET Sbjct: 864 GTGYSSLGYLNRFPVDKLKIDQSFIRDVTRREDHAAITRAIIALAKQLHLKVVAEGVETA 923 Query: 760 EQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 EQ E L + C QG++FSRP+PA+EI GW+S Sbjct: 924 EQLEFLERAGCDGAQGFYFSRPVPADEIAGWLSR 957 Score = 107 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 97/266 (36%), Gaps = 11/266 (4%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNN---IDMLIP 62 A + A + +G+ ++ + ++ +++ E + + ++ P Sbjct: 31 ALRRSAFHLREAQQVANLGSWELDLVQGRLEWSDQVFRIFEIDPERFEASYEAFLALVHP 90 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWT-RFALSKVSAEGKVYY-LA 120 D Y R + G + +L DG + S +G+ + Sbjct: 91 DDRERVDAAYRRSIADRGSYEIVH-----RLLMPDGRVKHVRERCQTFYSEDGRPLRSVG 145 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 V D + +E+ +L V+ VIV D + I N+ M+GY E G Q Sbjct: 146 TVWDVTSFHETEEKLHRLAAIVESTGDTVIVSDLQGRIRTWNKGAERMWGYAAEEIIG-Q 204 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 P T+L + L++++ + + E L + G I ++SP++D L Sbjct: 205 PVTVLPPLAKQGEPGQILRRVIDEHEVVRFESRGLHKDGRDFPISLTVSPLFDAENRLTG 264 Query: 241 LVMTFSDITEERQIRQLEGNILAAMC 266 + DITE +++ L + Sbjct: 265 VSAIIRDITEMERLKATLQERLKLVE 290 Score = 59.7 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 37/274 (13%), Positives = 82/274 (29%), Gaps = 27/274 (9%) Query: 116 VYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS- 174 + Y L++ E A + L A + LD + ++ + +F Sbjct: 17 LAYGLLLKPKRAEAALRRSAFHLREAQQVANLGSWELDLVQGRLEWSDQVFRIFEIDPER 76 Query: 175 -EASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTR----TGEKIWIKASIS 229 EAS L++ + R R+ ++ D+ + ++ R G ++ Sbjct: 77 FEASYEAFLALVHPDD-----RERVDAAYRRSIADRGSYEIVHRLLMPDGRVKHVRERCQ 131 Query: 230 PVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICR------NIE 283 Y V T D+T + + + A + S+ + ++ R E Sbjct: 132 TFYSEDGRPLRSVGTVWDVTSFHETEEKLHRLAAIVESTGDTVIVSDLQGRIRTWNKGAE 191 Query: 284 SVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATI-------RQRDGAPAGILQI 336 + + + + A +I + +DG I Sbjct: 192 RMWGYAAEEIIGQPVTVLPPLAKQGEPGQILRRVIDEHEVVRFESRGLHKDGRDFPISLT 251 Query: 337 KT---SSGAETSAFIERVADISQHMAALALEQEK 367 + + + + DI++ A QE+ Sbjct: 252 VSPLFDAENRLTGVSAIIRDITEMERLKATLQER 285 >UniRef50_A9BW89 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=7 Tax=cellular organisms RepID=A9BW89_DELAS Length = 947 Score = 836 bits (2161), Expect = 0.0, Method: Composition-based stats. Identities = 269/850 (31%), Positives = 402/850 (47%), Gaps = 67/850 (7%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A A + L++ M +M N E + GY G L + Sbjct: 84 AGTAGQQALWSTLDKAM-ALAEFTPEGRLMRANANYEAILGYPTSGAEGLLHSDLCTQAH 142 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKV-YYLALVR 123 A P+ R+ A E +SR + ++DGS W + V +G + + L + Sbjct: 143 --ADPDAYGRWRQRWGA-GETISRVGEHRRRDGSTCWLEATYAPVLDTQGALSHVLCIAT 199 Query: 124 DASVE----MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 D + ++E R+L + D D V++ D I N FT MFG+ E G Sbjct: 200 DITARVQADRRRQEHLRRLSLVADATDAAVVIADGNWTISYVNAGFTRMFGWSSEEVVGR 259 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 P LL +P + + L E +L+ + GE+ W+ A +PV L Sbjct: 260 APIALL-VPHASPEFTAAYRAELDAGKPVYREEILVGKDGERYWVSAQANPVMGPDGRLH 318 Query: 240 NLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRN- 298 V +DITE + L+ L AM P E+ +++CR +E + + VS+ + + Sbjct: 319 TTVTVITDITEAKMHEVLQRRALEAMARDQPLTEVLDLVCREVERIAPDIAVSVLEVDDQ 378 Query: 299 --------------------GMPIHWASSSHGAE-------------------------- 312 G+PI S GA Sbjct: 379 SRLHPLAAPSLPASYSAALDGVPIGPNVGSCGAAAFHNRPVLVGDIATDPLWADFKHLIL 438 Query: 313 -IQNAQSWSATIRQRDGAPAGILQIKTS--SGAETSAFIERVADISQHMAALALEQEKSR 369 + WS I G AG F +R+ + + ALALE+E++R Sbjct: 439 PLGYTACWSTPICGLQGGVAGTFAFYYRHFDRPGPDPFHQRLVEACTDLCALALEREQAR 498 Query: 370 QHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAW 425 + I QL +D +T LPNR+ L + + A V I +D + V DSLG+ Sbjct: 499 RRIRQLAFYDGLTTLPNRSLLLAQAEQALSVASHEGHELAVVFIDLDRFKQVNDSLGHPA 558 Query: 426 ADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMID 485 D+ L V R + +L+ R+ G +FV+V + ++ + L++ + +P MID Sbjct: 559 GDRLLCSVAQRIQAELRTGDIAGRLSGDEFVIVLPHCGGAQAAEVIERLQSALGEPCMID 618 Query: 486 DKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLV 543 D T S GI+ G++ + LL A AM + G + FFSP MN + +ERLV Sbjct: 619 DVSLASTASCGIAVFPADGRDMETLLHRADMAMYQAKSGGRGLYSFFSPEMNRLAQERLV 678 Query: 544 LGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGE 603 L AL++A+ + L+L YQPQ+ + G LYG+EALARW G + P+RFIPLAEE G Sbjct: 679 LETALRDALRSGGLRLHYQPQLDLKDGRLYGVEALARWSHAEFGEISPARFIPLAEECGL 738 Query: 604 IENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQ 663 I +G W + EACRQL EWRS+ I +PA+SVNLS F + LP ++D + + Sbjct: 739 IGELGTWALREACRQLGEWRSRGIDVPAMSVNLSPTSFHNLDLPRMIADTLEHNALKPQD 798 Query: 664 LTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSF 723 LT+EITES++++ + + +Q + GV LS+DDFGTG+S LS L LPV+E+K+D+SF Sbjct: 799 LTLEITESLLLDTNPGTMRTLQAVHSQGVRLSMDDFGTGYSSLSYLRRLPVSELKLDRSF 858 Query: 724 VDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLP 783 V ++ AL AI IG+SL+LTVVAEGVET Q +LR+ V QGY FSRPLP Sbjct: 859 VADLENDEAAQALSNAILGIGRSLHLTVVAEGVETAAQNTILREQGYPVAQGYLFSRPLP 918 Query: 784 AEEIPGWMSS 793 A ++ W+ + Sbjct: 919 AADLERWLQA 928 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 836 bits (2160), Expect = 0.0, Method: Composition-based stats. Identities = 220/826 (26%), Positives = 374/826 (45%), Gaps = 44/826 (5%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINEND-EVMFFNPAAEKLWGYKREEVIGNNIDM 59 +++ + +D F EQ+ + + + + + N AA + +GY E + + Sbjct: 214 LRVARTLHRSDERFRGLFEQHPVPMYIFDRDTLRFLAVNAAAVQQYGYSESEFLAMTVRA 273 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL 119 + P +++ + M+ +KDGS+I + ++ G+ Sbjct: 274 IRPHSEVARLETHLQRSDVTPGGP-RTMAGVWHHRRKDGSQISADISYHAMTFMGRPALF 332 Query: 120 ALVRDASVEM----AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 L D + ++ + + L +D++ + + D E + CN AF G E Sbjct: 333 VLADDVTEQINAEAEAQRSNQMLETVIDNIPQRIFWKDKELRYLGCNMAFARDAGLAYPE 392 Query: 176 ASGMQPDTLLNIPEFP-ADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 + D + F A R +L + E L+ G S P D Sbjct: 393 QVIGKRDEDMPWRAFAEALGRQDTDVMLSGVPKMNYETDLVI-DGVHRTTVTSKLPFTDS 451 Query: 235 LAHLQNLVMTFSDITEER--------QIRQLEGNILAAMCSSPPFH-EMGEIICRNIESV 285 + ++ +++DITE + Q R L+ ++ A + + P + E + + + Sbjct: 452 DGRVIGVLGSYTDITERKRADLALRLQSRALDASVNAILITEPSKEGNLIEYVNPAFKRI 511 Query: 286 LNESHVSLFALRNGMPIHWASSSHG-----AEIQNAQSWSATIR--QRDGAPAG----IL 334 + + G + + SA +R ++DGA I Sbjct: 512 TGYDPQEVIGQDCRLLQRDDRDQEGIAAIRQALAANREVSAVLRNYRKDGALFWNQLYIA 571 Query: 335 QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYL 394 + + G +T+ I + D++ + + ++ +E +D +T LPNRN L + L Sbjct: 572 PVPDADG-QTTHHIAVINDVTALI--------RYQEQLEYQANYDSLTRLPNRNLLRDRL 622 Query: 395 DDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRI 450 + A V I +D ++V DSLG++ D+ L V +R + + R Sbjct: 623 QHALIVAQRHHKGVAVVFIDLDGFKNVNDSLGHSVGDRLLSVVADRLARCARASDTVARH 682 Query: 451 EGTQFVLVSLEN-DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDY 507 G +FV+V + D ++ + +R +S+P+ +D + S+G S G + + Sbjct: 683 GGDEFVIVMTDTVDEQSLIAWMERVRASISEPVWLDGTELYVGCSMGASLFPQDGDDAET 742 Query: 508 LLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFA 567 L+ A AM + G N +QF+ P MN RL L L+ A+ +N+ L YQPQ+ Sbjct: 743 LMKKADLAMYRAKDMGRNTFQFYQPEMNVSAGARLNLERRLRRALRDNEFLLHYQPQVDI 802 Query: 568 ETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNI 627 ETG++ G+EAL RWHDP G +PPS+FIP+AEE G I + WV+ EACRQ W+ + + Sbjct: 803 ETGQVVGMEALVRWHDPEVGLIPPSQFIPVAEESGLIGPLSEWVLREACRQNKAWQDEGL 862 Query: 628 HIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQIL 687 +SVNLSA F+ + V + G+D L +E+TES +M + E + L Sbjct: 863 PPARVSVNLSARQFQQRDIAKLVMQVLEETGLDPQYLELELTESTIMRNAEEAVSMLNEL 922 Query: 688 RDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSL 747 +G+GL++DDFGTG+S LS L PV +KID+SFV + AI ++ SL Sbjct: 923 HALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGESSDDETITSAIIALAHSL 982 Query: 748 NLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 NL V+AEGVET Q + L++ C +QGYFF++PLP IPG + Sbjct: 983 NLQVIAEGVETSTQLDFLKERACDEMQGYFFAKPLPHHAIPGMLQR 1028 Score = 48.9 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 30/227 (13%), Positives = 62/227 (27%), Gaps = 23/227 (10%) Query: 53 IGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA 112 +G +D L AH E +R + + L +D ++ ++ Sbjct: 148 LGMEVDRL------EAHMEQLRAQEDRA------LKAALDASMRDSRYAMLFLVVTMLAG 195 Query: 113 EGKVYYLALVRDASVEMAQK------EQTRQLIIAVDHLDRPVIVLDPER-HIVQCNRAF 165 G + Y R+ + + + P+ + D + + N A Sbjct: 196 SGLLIYTFGARENVAREKLRVARTLHRSDERFRGLFEQHPVPMYIFDRDTLRFLAVNAAA 255 Query: 166 TEMFGYCISEASGMQPDTLLNIPEFPA--DNRIRLQQLLWKTARDQDEFLLLTRTGEKIW 223 + +GY SE M + E + R + + G +I Sbjct: 256 VQQYGYSESEFLAMTVRAIRPHSEVARLETHLQRSDVTPGGPRTMAGVWHHRRKDGSQIS 315 Query: 224 IKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPP 270 S + + V D+TE+ + + Sbjct: 316 ADISYHAMT-FMGRPALFV-LADDVTEQINAEAEAQRSNQMLETVID 360 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 836 bits (2160), Expect = 0.0, Method: Composition-based stats. Identities = 204/818 (24%), Positives = 372/818 (45%), Gaps = 52/818 (6%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGY-KREEVIGNNIDMLIPRDLR 66 ++ F +E ++ ++ +++ N A+ + G ++IG +I +I Sbjct: 113 RESEERFRRLVELAPDAILV-HQGGTIVYANRQAQIMMGAPTPTDLIGRSIIEIIDPACH 171 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDAS 126 + ++ G + + E++L + DG ++ + + G ++ RD S Sbjct: 172 DLVAKRLKLLARGEQLPL----VEMRLVRLDGGQVEVESTMGMTTYGGHRAMQSVWRDIS 227 Query: 127 VEMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPD 182 + ++ + +I D E IV N ++G+ E G Sbjct: 228 ARKQAEAASQAAKDHFLAFARSTPDALIAFDEEGRIVSWNEGAEAVYGFRQDEILGSPLS 287 Query: 183 TLLNIPEFPADNRIRLQQLLWKTARDQD-----EFLLLTRTGEKIWIKASISPVYDVLAH 237 L+ + A N ++++ R E L ++GE+ ++ S+ A Sbjct: 288 RLIP-ERYHAINAAWVKRMAKDRGRHNFTGKPIEAHGLRKSGEEFPVEYSVGRWR--EAG 344 Query: 238 LQNLVMTFSDITEERQIRQLEGNILAAMCSSPP------FHEMGEIICRNIESVLNESHV 291 + DI++ +Q + ++ A+ SP + + + V + Sbjct: 345 RNFFSVAARDISKRKQSEEKLRHLSQAVEQSPADVVITNAEGIIQYVNPRFSQVTGYASK 404 Query: 292 SLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG----ILQIKTSS 340 + L++G S I + W + R++DG+ I I+ +S Sbjct: 405 EVIGKKPSILKSGRTPAALYDSLWETISAGKEWRGELMNRKKDGSLFWQHAIISPIRDNS 464 Query: 341 GAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDK 400 G + +I DIS +++ + + + +D +TGLPNR + L + + Sbjct: 465 GV-ITHYISVKEDISI--------RKEYEERLVRQANYDALTGLPNRILAMDRLKQAIAQ 515 Query: 401 AVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFV 456 A + L+ +D + V D+LG+A D L E R + L+ + R+ G +FV Sbjct: 516 AQRYNRKVALMLLDLDDFKKVNDTLGHAAGDLLLKEAALRLVDCLREGDTVARLGGDEFV 575 Query: 457 LVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAH 513 L+ + D S+ +A+++ ++P + + SIGI+ D ++ L+ A Sbjct: 576 LLLPDLTDTSSAEVVAEKILAACNQPFDVGGHEAYIAGSIGIAIFPDDERDPILLMRNAD 635 Query: 514 NAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELY 573 AM ++ G +++F+P MN E + + + L+ AI N++K+ YQP + + TG L Sbjct: 636 AAMYRSKREGKGVFRYFTPEMNARALEHMRMESQLRHAIERNEMKVHYQPLVDSGTGRLV 695 Query: 574 GIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALS 633 G EAL RW +P+ G V P +FIPLAEE G I +IG WV+ ACR A W+ + I ++ Sbjct: 696 GAEALLRWSNPVLGEVSPEQFIPLAEETGLILSIGAWVLRTACRDAASWQRPDHEIF-VA 754 Query: 634 VNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVG 693 VN+S F+ L V +++ G+ L +E+TES+++EH E IQ L +GVG Sbjct: 755 VNISGKQFQKRTLVEIVRSSLNESGLPPACLELELTESVLLEHTQETLSIIQELESLGVG 814 Query: 694 LSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVA 753 ++DDFGTGFS +S L P +KID+SF+ + L+++I ++ S++L VV Sbjct: 815 FAIDDFGTGFSSISYLRRFPFDTLKIDRSFIKDLGDNEGDADLVKSIIAMANSMSLKVVG 874 Query: 754 EGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 EGVET Q E LR C + QG+ +SRP+P ++ + Sbjct: 875 EGVETHGQREFLRLSGCHIAQGWLYSRPIPGKDFQELI 912 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 61/314 (19%), Positives = 126/314 (40%), Gaps = 7/314 (2%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A AA F + +E ++ +N AE ++G++++E++G+ + LIP Sbjct: 235 ASQAAKDHFLAFARSTPDALIAFDEEGRIVSWNEGAEAVYGFRQDEILGSPLSRLIPERY 294 Query: 66 RPAHPEYI-RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRD 124 + ++ R ++ G+ G E +K G + +++ + G+ ++ RD Sbjct: 295 HAINAAWVKRMAKDRGRHNFTGKPIEAHGLRKSGEEFPVEYSVGRWREAGRNFFSVAARD 354 Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 S +E+ R L AV+ V++ + E I N F+++ GY E G +P + Sbjct: 355 ISKRKQSEEKLRHLSQAVEQSPADVVITNAEGIIQYVNPRFSQVTGYASKEVIGKKPS-I 413 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 L PA L + + + E + + G W A ISP+ D + + + Sbjct: 414 LKSGRTPAALYDSLWETISAGKEWRGELMNRKKDGSLFWQHAIISPIRDNSGVITHYISV 473 Query: 245 FSDIT-----EERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNG 299 DI+ EER +RQ + L + + + + + + + L L + Sbjct: 474 KEDISIRKEYEERLVRQANYDALTGLPNRILAMDRLKQAIAQAQRYNRKVALMLLDLDDF 533 Query: 300 MPIHWASSSHGAEI 313 ++ ++ Sbjct: 534 KKVNDTLGHAAGDL 547 Score = 81.6 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 59/385 (15%), Positives = 121/385 (31%), Gaps = 47/385 (12%) Query: 24 GAVLINENDEVMFFNPAAEKLWGYKREEVI-GNNIDMLIPRDLRPAHPEYIRHNREGG-- 80 G + + + +++FN KL+ + G + I H EY + E Sbjct: 2 GISVFDADLNMVYFNTQFLKLYKFPPGLAQPGTPFETFI--RYNAEHGEYGDCDIETEVR 59 Query: 81 ---KARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVY-YLALVRDASVEMAQKEQTR 136 + + + ++ DG + + S + G + Y + + E+ +E Sbjct: 60 FRVERARKFEAHTVERTTPDGRVLEIQG--SPLPGGGFITTYTDISERRNAEVRLRESEE 117 Query: 137 QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYC-ISEASGMQPDTLLNIPEFPADNR 195 + V+ ++V IV NR M G ++ G +++ Sbjct: 118 RFRRLVELAPDAILV-HQGGTIVYANRQAQIMMGAPTPTDLIGRSIIEIIDPACHD-LVA 175 Query: 196 IRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIR 255 RL+ L E L+ G ++ +++++ + + + DI+ +Q Sbjct: 176 KRLKLLARGEQLPLVEMRLVRLDGGQVEVESTMG--MTTYGGHRAMQSVWRDISARKQAE 233 Query: 256 QLEG----NILAAMCSSPP----FHEMGEIICRN--IESVLNESHVSLFALRNGMPIHWA 305 + LA S+P F E G I+ N E+V + I Sbjct: 234 AASQAAKDHFLAFARSTPDALIAFDEEGRIVSWNEGAEAVYGFRQDEILGSPLSRLIPER 293 Query: 306 SSS------------HGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVA- 352 + G + A ++ G + F A Sbjct: 294 YHAINAAWVKRMAKDRGRHNFTGKPIEAHGLRKSGEEFPVEYSVGRWREAGRNFFSVAAR 353 Query: 353 DISQHMAALALEQEKSRQHIEQLIQ 377 DIS+ +++S + + L Q Sbjct: 354 DISK--------RKQSEEKLRHLSQ 370 >UniRef50_Q13IZ7 Putative diguanylate cyclase(GGDEF)/ phosphodiesterase(EAL) with PAS/PAC and GAF sensors n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13IZ7_BURXL Length = 847 Score = 832 bits (2150), Expect = 0.0, Method: Composition-based stats. Identities = 258/841 (30%), Positives = 398/841 (47%), Gaps = 65/841 (7%) Query: 12 GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPE 71 G L Q VL++E+ + FFNPAAE LWG V+G + ML+PR ++PA Sbjct: 8 GTLVQVLAQIPDAVVLVDEDGAIGFFNPAAEALWGLTAAAVLGADAGMLLPRGIQPA--- 64 Query: 72 YIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQ 131 H + G V+G LQ+E+ DG + ++ G+ + A +RD + + Q Sbjct: 65 --GHGVQTG--NVDGPGLALQIERNDGVMRRGQMSIHGFEVAGRRFRAAFIRDITDQHRQ 120 Query: 132 KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFP 191 E+ +QL+ V+ D +IV + I N T M GY +E G++ Sbjct: 121 CEEWQQLLRVVNGSDNAIIVASLDGSISFINSGVTRMLGYAAAEVQGLRLVEPFAGVHTN 180 Query: 192 ADNRIRLQQLLWKTARD----QDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSD 247 R+Q + + + + L+ T+ G +W+ I+ + D NL+ +D Sbjct: 181 MAAVERIQSAAREPSTPDHPFRQDLLVYTKGGRPLWVNVGITVITDNAGAPVNLLAVLTD 240 Query: 248 ITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGM------- 300 IT R +L+ +L AM P E+ I+CR +E + E + + +G Sbjct: 241 ITLTRMREELQQKVLDAMARELPATEVAGILCREVERIAPEVVATFLRVDDGRLFTLAAP 300 Query: 301 -------------PIHWASSSHGAEIQNA---------------------------QSWS 320 I + S G WS Sbjct: 301 RLPVTVTRAMDGESIGPCAGSCGTAAWRGTPVVVTDIASDPLWTGYRDLVLPLGLAACWS 360 Query: 321 ATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDP 380 ++ DG+ G AF + + D+ + AL LE+EK+R I QL D Sbjct: 361 YPVKGADGSVLGTFAFYYRENHGPVAFHQSLVDMGLSLCALLLEREKARMRIHQLAFHDT 420 Query: 381 MTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNR 436 +TGLPNRN L++ A + I +DH + V D+ G+A D+ L E R Sbjct: 421 LTGLPNRNMFETQAQQLLNDARRTERELALVFIDLDHFKRVNDTRGHATGDEVLCETGRR 480 Query: 437 FREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIG 496 F+ L+ L R+ G +FV + V T I + L + P+++ P + SIG Sbjct: 481 FKSVLRDGDLLGRLAGDEFVAILPHCGVHQATGIVERLLAATAPPVVVAGAPIHASASIG 540 Query: 497 ISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISN 554 I+ G++ LL A AM + + G + FF M+ ++E+ +L A L+ A+ + Sbjct: 541 IAMYPADGEHVPTLLRQADIAMYHAKARGRGHFCFFREEMSRNIQEQAMLEADLRVALKH 600 Query: 555 NQLKLVYQPQIFAETGEL-YGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIA 613 + L L YQPQ A G + G+EAL RW+ G VPP RF+ LAEE G I +G+WV Sbjct: 601 DLLDLWYQPQFDAANGHVLSGVEALLRWNHATLGSVPPVRFVVLAEECGLIGELGKWVTQ 660 Query: 614 EACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMM 673 ACRQLA+WR++ + IP +S+NLSA FR + L +V+ + A G+ H LT+E+TES+M Sbjct: 661 RACRQLADWRARGVEIPRVSINLSASDFRDSTLAERVARTLLAHGLQPHDLTLEMTESVM 720 Query: 674 MEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRI 733 + + + I L +G+ LS+DDFGTG+S L L LP+ E+K+D+SFV Sbjct: 721 LGDEPGVLSMIDELHRLGIQLSLDDFGTGYSSLGYLHRLPLDELKLDRSFVRDLDHSDSA 780 Query: 734 LALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 AL + IG+SLN+ VVAEGVET Q + L + C V+QGY +RP+ + W+ + Sbjct: 781 RALTSTVLRIGESLNIKVVAEGVETDTQRQFLVEHGCPVLQGYLLARPMAPHLLEEWLRA 840 Query: 794 V 794 Sbjct: 841 A 841 Score = 58.9 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 82/259 (31%), Gaps = 27/259 (10%) Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 MAQ + L+ + + V+++D + I N A ++G + G LL Sbjct: 1 MAQAQIAGTLVQVLAQIPDAVVLVDEDGAIGFFNPAAEALWGLTAAAVLGADAGMLLPRG 60 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 PA + ++ + Q E G + SI +A + DI Sbjct: 61 IQPAGHGVQTGNVDGPGLALQIE----RNDGVMRRGQMSIHGF--EVAGRRFRAAFIRDI 114 Query: 249 TEE-RQIRQLEGNILAAMCSSPPFHEMG-----EIICRNIESVLNESHVSLFALRNGMPI 302 T++ RQ + + + S I + +L + + LR P Sbjct: 115 TDQHRQCEEWQQLLRVVNGSDNAIIVASLDGSISFINSGVTRMLGYAAAEVQGLRLVEPF 174 Query: 303 ------HWASSSHGAEIQNAQSWSATIRQ------RDGAPAGI---LQIKTSSGAETSAF 347 A + + + RQ + G P + + + T + Sbjct: 175 AGVHTNMAAVERIQSAAREPSTPDHPFRQDLLVYTKGGRPLWVNVGITVITDNAGAPVNL 234 Query: 348 IERVADISQHMAALALEQE 366 + + DI+ L+Q+ Sbjct: 235 LAVLTDITLTRMREELQQK 253 >UniRef50_D2UAD2 Hypothetical c-di-gmp phosphodiesterase or signal transduction protein n=1 Tax=Xanthomonas albilineans RepID=D2UAD2_XANAL Length = 864 Score = 831 bits (2149), Expect = 0.0, Method: Composition-based stats. Identities = 233/835 (27%), Positives = 403/835 (48%), Gaps = 64/835 (7%) Query: 15 FPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIR 74 ++++ G V+I+ ++ FN AE LW + + +G I LI +R Sbjct: 33 LNSMQRTADGIVVIDAQSRIVAFNHIAETLWNLPQAQALGREIGELIDEGIRADFLASCL 92 Query: 75 HNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQ 134 +G L L+ + W + S V EG + VRD S E + + Sbjct: 93 R---------DGNDYRLLLQSGKDVQRWISISASPVPQEGGPLQVLQVRDISAERERDTK 143 Query: 135 TRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADN 194 R L +A++ D +++ D + HI+ N F+ +FGY E G P +L P Sbjct: 144 MRLLSLALERSDSAIMLCDKDLHILYVNAGFSRVFGYDTKEILGKLPSGVLPGPGSDMQV 203 Query: 195 RIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQI 254 + ++ + Q + L+ + +WI +P+ + +Q+ +++F+DIT + Sbjct: 204 VSQTRERMRAGFGHQVDLLVYRKDSTPLWITMVANPITEEDGSVQHYMLSFTDITHSKMH 263 Query: 255 RQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNG--------------- 299 L N+L AM P ++ +ICR E + + S+F++ + Sbjct: 264 EVLHKNVLDAMVREQPLVDVATLICREFERIAPQLLTSIFSVDSNSNLHLLVAPSMPELL 323 Query: 300 ------MPIHWASSSHGAEIQNAQ---------------------------SWSATIRQR 326 +PI + G+ I + + I+ Sbjct: 324 RQKVGNVPIGPNVGASGSAIWRGKQVMVKDAQRDELFADYRSLTEELHLGTCVATPIKSS 383 Query: 327 DGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPN 386 G G + E + R+ ++ H+ ALA+E+E++++ + QL +D +T LPN Sbjct: 384 GGRVLGSFALYYREVCEPLPWHMRLIELCVHLCALAMEREQTKERVHQLAFYDALTNLPN 443 Query: 387 RNNLHNYLDDLVDKAV----SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLK 442 R + + A + + +D + V ++ G+ D L ++ R E++ Sbjct: 444 RVMFSARAEQALADAEYHGSPVAILFVDIDRFKRVNETQGHHAGDGLLRDIAQRLTEEMG 503 Query: 443 PDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--D 500 L R G +FV++ + A+ L +++P+++ + SIG++ + Sbjct: 504 VTDLLSRQSGDEFVMMLPQCGAEQAAGTAERLLLALAEPVVVGHVTLHPSASIGVAMFPE 563 Query: 501 LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLV 560 G + + LL A AM + GG +++FS MN M +ER+ L AL++A+ N+L+L Sbjct: 564 DGDDIETLLRHADLAMYRAKDEGGGSFRYFSSDMNRMAQERVALETALRDALHQNELQLH 623 Query: 561 YQPQIFAET-GELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQL 619 YQPQ+F++ LYG+EAL RW P G++ P+RF+P+AEE G IE +G+W + EACRQ+ Sbjct: 624 YQPQVFSQAPHALYGVEALLRWEHPNLGNISPARFVPMAEECGLIEELGQWALREACRQM 683 Query: 620 AEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTE 679 A+WR + I +P ++VNLSA +F QLP +V + A+G+ L +E+TES+M+ + Sbjct: 684 ADWRLRGIPVPRVAVNLSANNFAEPQLPARVEQMLSAYGLVADDLALEMTESVMLSNTAA 743 Query: 680 IFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEA 739 + ++ L+ GV LS+DDFGTG+S LS L LP+ E+K+D SFV AL + Sbjct: 744 VLDNLRQLQSSGVLLSLDDFGTGYSSLSHLHQLPINELKLDMSFVRDLEHSPTSRALTTS 803 Query: 740 ITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 + IG++L + VAEGVET Q +L ++ C V+QG+ FSR LPA + W+ + Sbjct: 804 VLRIGETLGMHTVAEGVETDAQRSLLAELGCGVLQGFLFSRALPASALEQWLQAQ 858 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 825 bits (2133), Expect = 0.0, Method: Composition-based stats. Identities = 215/817 (26%), Positives = 377/817 (46%), Gaps = 61/817 (7%) Query: 17 ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML---IPRDLRPAHPEYI 73 A + + +NE + + N AA G+ +EE++ I L P D+ AH + Sbjct: 336 ASDYAPDCILWVNEQARICYANEAALHCHGFSKEELLSMTIHDLDPDFPPDVWLAHWHEL 395 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKE 133 +H G++ E + ++DGS + + V K Y +A RD + + Sbjct: 396 QHK--------GGITIETRHRRRDGSIFPIEVSANFVKFGDKEYNIAYHRDITERKKSEA 447 Query: 134 QTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE 189 R +L + + +D + E+ GY + G P + + Sbjct: 448 ALRYSEQRLRDVSEASGEYLWEIDINLGYTYVSNRSIEVKGYTPEQLLGHAPAEFMPPED 507 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 RI + + K + + +T +G +W + S P YD HL L T +IT Sbjct: 508 IDMAARI-VNLAISKNQPFKLQHRDITPSGAILWEEVSGVPFYDDAGHLLGLRGTGRNIT 566 Query: 250 EERQIRQLEGNILAAMCSSPPF-------------HEMGEIICRNIESVLNESHVSLFAL 296 + + AA + I + E VL E+ L A Sbjct: 567 GRKLKEEQLRVAAAAFETHEAIMITDAHGTIIKVNQAFQRITGYSQEEVLGENPRILSAG 626 Query: 297 RNGMPIHWASSSHGAEIQNAQSWSATI--RQRDG----APAGILQIKTSSGAETSAFIER 350 RN + S+ ++ W I +++ G I ++ +G T+ ++ Sbjct: 627 RNEKSFY---SAMWQQLTTLGRWRGEIWDKRKSGQIYPKWMTITAVRDENGK-TTEYVAI 682 Query: 351 VADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VV 406 +DI+Q ++ + + I L +D +T LPNR L + L + + V Sbjct: 683 FSDITQ--------RKLAEEEIRNLAFYDALTRLPNRRLLLDRLHAALSVSARSRRFGAV 734 Query: 407 YLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDV-- 464 + +D + + D++G+ + D L+EV R + ++ + R+ G +FV++ E D Sbjct: 735 LFLDMDRFKTLNDTMGHDYGDLLLIEVAERIKLCVREIDTVARLGGDEFVILVEEIDTRA 794 Query: 465 ----SNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLG--KNRDYLLSTAHNAMDY 518 +I IA+++R+ +S P + +K + SIG+ G ++ D LL A AM Sbjct: 795 EETSKHIAAIAEKIRSALSVPYRLKEKHHHSSPSIGVCLYRGIEESTDDLLKHADMAMYQ 854 Query: 519 IRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEAL 578 + +G N +FF P M + V+ R+ L L+ A+ N+QL+L YQ Q+ G EAL Sbjct: 855 AKDSGRNAVRFFDPLMQQAVEARVTLENDLRHALPNDQLQLYYQIQVD-NDRRAIGAEAL 913 Query: 579 ARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHI-PALSVNLS 637 RW P+ G V P+ FIP+AEE I +G WV+ AC QLA W + + L+VN+S Sbjct: 914 VRWIHPIRGMVSPAHFIPIAEETSLILEVGAWVLKTACLQLAVWADRPMTCNLILAVNVS 973 Query: 638 ALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVD 697 F+ +++ + A+ I +L +E+TES+++ ++I +++ L+ +GV LS+D Sbjct: 974 VQQFKQVGFVEHIAELIRAYCIVPQRLKLELTESVVLNDVSDIVQKMCALKSLGVRLSMD 1033 Query: 698 DFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVE 757 DFGTG+S LS L +LP+ ++KID+SFV T++ +++ I ++ Q+ L V+AEGVE Sbjct: 1034 DFGTGYSSLSYLKNLPLDQLKIDQSFVRNIATDENDAVMVKTIIAMAQNFRLNVIAEGVE 1093 Query: 758 TKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 T+ Q L++ C QGY+F +P P E+ + ++ Sbjct: 1094 TEAQLAFLKQNGCMCYQGYYFGKPAPIEQFQSQLEAL 1130 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 52/394 (13%), Positives = 109/394 (27%), Gaps = 38/394 (9%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDM----LI 61 A ++ +++ +G +L + E++ N A L G +++G + +I Sbjct: 195 ALKNSEQQARNLIDKLQVGVLLQSARAEILLCNQIALDLLGLSEAQLLGKSSFDPDWNVI 254 Query: 62 PRDLRPA--HPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL 119 D P + + + + + K+D + A + Sbjct: 255 HEDGSPFPGSEHPVPVSIATKSLVHDVVMGVYRPSKRDRVWLLVSAAPQLNPNNEVEQVV 314 Query: 120 ALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 D + +E+ A D+ ++ ++ + I N A G+ E M Sbjct: 315 CTFVDITERKKMEERLELTQFASDYAPDCILWVNEQARICYANEAALHCHGFSKEELLSM 374 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 L P+FP D + L E R G I+ S + V + Sbjct: 375 TIHDL--DPDFPPDVWLAHWHELQHKGGITIETRHRRRDGSIFPIEVSANFV--KFGDKE 430 Query: 240 NLVMTFSDITEERQIRQLEG------------------NILAAMCSSPPFHEMGEIICRN 281 + DITE ++ I + + + E+ Sbjct: 431 YNIAYHRDITERKKSEAALRYSEQRLRDVSEASGEYLWEIDINLGYTYVSNRSIEVKGYT 490 Query: 282 IESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQ--RDGAPAGILQIKTS 339 E +L + + I A+ I Q + R GA Sbjct: 491 PEQLLGHAPAEFMPPED---IDMAARIVNLAISKNQPFKLQHRDITPSGAILWEEVSGVP 547 Query: 340 SGAETSAFIERVADISQHMAALALEQEKSRQHIE 373 + + + ++ + + Sbjct: 548 FYDDAGHLLGL-----RGTGRNITGRKLKEEQLR 576 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 64/395 (16%), Positives = 125/395 (31%), Gaps = 47/395 (11%) Query: 11 DGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHP 70 + L + + NP E++ G ++G I R+ + Sbjct: 73 EARLRTLFNTIKDLVWLKAPDGVYLACNPVVERMLGTAEAAIVGRTDYDFISREQADSFR 132 Query: 71 EYIRHNREGGKARVEGMSRELQLEKKDGSKIWT-RFALSKVSAEGK--VYYLALVRDASV 127 E+ R G + E L KD + + V + + + RD + Sbjct: 133 EHDRAAMNTGTVCI----NEGWLTFKDTGYCGLFETSKTPVYDDTGQLIGVFGIARDITE 188 Query: 128 EMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDT 183 + + Q +D L V++ I+ CN+ ++ G ++ G Sbjct: 189 RKRAEAALKNSEQQARNLIDKLQVGVLLQSARAEILLCNQIALDLLGLSEAQLLGKSSFD 248 Query: 184 -----------LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVY 232 E P I + L+ + R ++W+ S +P Sbjct: 249 PDWNVIHEDGSPFPGSEHPVPVSIATKSLVHD--VVMGVYRPSKRD--RVWLLVSAAPQL 304 Query: 233 DVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPP---FHEMGEIICRNIESVL--- 286 + ++ +V TF DITE +++ + A +P + IC E+ L Sbjct: 305 NPNNEVEQVVCTFVDITERKKMEERLELTQFASDYAPDCILWVNEQARICYANEAALHCH 364 Query: 287 NESHVSLFAL------RNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGI-LQIKTS 339 S L ++ + P W + H + + + R+RDG+ I + Sbjct: 365 GFSKEELLSMTIHDLDPDFPPDVWLAHWHELQHKGGITIETRHRRRDGSIFPIEVSANFV 424 Query: 340 SGAETSAFIERVADISQHMAALALEQEKSRQHIEQ 374 + I DI+ E++KS + Sbjct: 425 KFGDKEYNIAYHRDIT--------ERKKSEAALRY 451 Score = 70.1 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 55/157 (35%), Gaps = 8/157 (5%) Query: 16 PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRH 75 A + ++ + + ++ N A +++ GY +EEV+G N +L + + Sbjct: 579 AAAFETHEAIMITDAHGTIIKVNQAFQRITGYSQEEVLGENPRILSAGRNEKSFYSAMWQ 638 Query: 76 NREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYLALVRDASVEMAQKE 133 + E+ ++K G W + Y+A+ D + +E Sbjct: 639 QLTT----LGRWRGEIWDKRKSGQIYPKWMTITAVRDENGKTTEYVAIFSDITQRKLAEE 694 Query: 134 QTRQLII--AVDHLDRPVIVLDPERHIVQCNRAFTEM 168 + R L A+ L ++LD + + Sbjct: 695 EIRNLAFYDALTRLPNRRLLLDRLHAALSVSARSRRF 731 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 823 bits (2128), Expect = 0.0, Method: Composition-based stats. Identities = 193/710 (27%), Positives = 316/710 (44%), Gaps = 45/710 (6%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 L VE A +E + ++ DP+ I N +FGY E G Sbjct: 696 LAERRQVEQALRESEALKASVLASAACGIVATDPQGLITVFNPGAEAIFGYAAHEVVGKV 755 Query: 181 PDTLLN------------IPEFPADNRIRLQQLLWKTAR----DQDEFLLLTRTGEKIWI 224 TL + + L+ + D+ E + + G +I I Sbjct: 756 TPTLWHDAEEIAAAAVALSRDLGCRVEAGFDALVARARCSGQVDERETAGVRKDGRRITI 815 Query: 225 KASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE------II 278 + +++ + D L + T DIT ++Q + + +I Sbjct: 816 RLAVTVMRDAQGALAGYLGTIVDITAQKQAAAQLNLAAKVFEQGGEGIAITDAACNIVMI 875 Query: 279 CRNIESVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGA-- 329 + + S V + L +G S I++ W I R++DG+ Sbjct: 876 NQAFTRITGYSEVEVLGRNPSLLASGRHDQAFYQSMWESIESLGHWQGEIWNRRKDGSVY 935 Query: 330 PAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNN 389 P +L + + +I DI+QH +++ I++L FD +TGLPNR+ Sbjct: 936 PEWLLISRVDGDGAPTHYIGTFIDITQH--------KEAEASIQRLAHFDALTGLPNRSL 987 Query: 390 LHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQ 445 L + + +A + + +D ++V DSLG+ D L++V R R ++ + Sbjct: 988 LEERVRHDLARAHRGREALALMFVDLDRFKNVNDSLGHRVGDALLIQVAERLRRAVRDED 1047 Query: 446 YLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGK 503 + R+ G +F++V D +A +L V++ I+ +LS GI+ G+ Sbjct: 1048 TVSRLGGDEFIVVLPSTDADGAAHVAAKLLEVMAPAYRIEQHELTCSLSAGIAMYPADGE 1107 Query: 504 NRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQP 563 + + L +A AM +++G N + FF+ M E L + L+ A+ N +L+L YQP Sbjct: 1108 SFEALSMSADTAMYRAKQSGRNAYCFFTAEMQERSARNLQIENDLRRALENGELRLHYQP 1167 Query: 564 QIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWR 623 Q L G EAL RW P G V P FIP+AEE G I IG WV+ A QL W+ Sbjct: 1168 QFTLADRRLVGAEALLRWQHPQLGMVSPVEFIPIAEECGLILPIGEWVLRAAVSQLRVWQ 1227 Query: 624 SQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKR 683 + + ++VNLSA+ FR L + VS + A G+ L +E+TES+ M++ Sbjct: 1228 QEGLPPMTVAVNLSAVQFRQASLTDVVSRILDAEGLAAQFLELELTESVAMDNPLAAIAT 1287 Query: 684 IQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSI 743 + LR +GV +S+DDFGTG+S +S L V ++KID+SFV + A++ A S+ Sbjct: 1288 MDKLRALGVRMSIDDFGTGYSSMSYLKRFRVHKLKIDRSFVADLAADPEDEAIVTATISL 1347 Query: 744 GQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 + L L +AEGVE++ Q LR C QGY FSRPL + ++ + Sbjct: 1348 ARDLGLQTIAEGVESEAQLAFLRAKGCDEAQGYLFSRPLAPAQFAAFVRA 1397 Score = 148 bits (375), Expect = 7e-34, Method: Composition-based stats. Identities = 56/276 (20%), Positives = 95/276 (34%), Gaps = 19/276 (6%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 ++ A ++ + L G V + + FNP AE ++GY EV+G + + Sbjct: 701 QVEQALRESEALKASVLASAACGIVATDPQGLITVFNPGAEAIFGYAAHEVVGK-VTPTL 759 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMS--------------RELQLEKKDGSKIWTRFAL 107 D + +R+ G G RE +KDG +I R A+ Sbjct: 760 WHDAEEIAAAAVALSRDLGCRVEAGFDALVARARCSGQVDERETAGVRKDGRRITIRLAV 819 Query: 108 SKVSAEGKV--YYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAF 165 + + YL + D + + Q + + + D +IV N+AF Sbjct: 820 TVMRDAQGALAGYLGTIVDITAQKQAAAQLNLAAKVFEQGGEGIAITDAACNIVMINQAF 879 Query: 166 TEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIK 225 T + GY E G P LL + + + Q E + G Sbjct: 880 TRITGYSEVEVLGRNPS-LLASGRHDQAFYQSMWESIESLGHWQGEIWNRRKDGSVYPEW 938 Query: 226 ASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNI 261 IS V D + + TF DIT+ ++ + Sbjct: 939 LLISRV-DGDGAPTHYIGTFIDITQHKEAEASIQRL 973 Score = 71.6 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 47/125 (37%), Gaps = 5/125 (4%) Query: 18 LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNR 77 EQ G + + ++ N A ++ GY EV+G N +L A + + + Sbjct: 856 FEQGGEGIAITDAACNIVMINQAFTRITGYSEVEVLGRNPSLLASGRHDQAFYQSMWESI 915 Query: 78 EGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV-YYLALVRDASVEMAQKEQTR 136 E E+ +KDGS +S+V +G +Y+ D + + + Sbjct: 916 ESLGH----WQGEIWNRRKDGSVYPEWLLISRVDGDGAPTHYIGTFIDITQHKEAEASIQ 971 Query: 137 QLIIA 141 +L Sbjct: 972 RLAHF 976 Score = 51.2 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 50/150 (33%), Gaps = 4/150 (2%) Query: 116 VYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 V L L+ ++ +++T L +D + P+ L + C+ ++ Sbjct: 271 VGALLLIWVVTLRRLVRQRTATLEATLDAIPDPLFELGLDGRYHDCHTPRADLLAAPPDA 330 Query: 176 ASGMQPDTLLNIPEFPAD-NRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 G +L + +R Q +A Q E L G W + S++ Sbjct: 331 LIGRLLTDVLPAAAAATCLSALREAQATGHSAGQQFELPLR---GGNFWFELSVARKPTG 387 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNILAA 264 + V+ DI+E ++ A Sbjct: 388 VGREPRFVVLARDISERKRAEARLRMATEA 417 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 821 bits (2121), Expect = 0.0, Method: Composition-based stats. Identities = 202/821 (24%), Positives = 364/821 (44%), Gaps = 46/821 (5%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A+ + +F +E +G L+ + ++ N G + +IG+ + L Sbjct: 33 AEGLSAALFQSVVEALPVGTALL-RDGVIVHANATLAGQIGETIDTLIGSPLT----SYL 87 Query: 66 RPAHPEYIRHNREGGKARVEGMSREL--QLEKKDGSKIWTRFALSKVSAEGKVYYLALVR 123 PA ++ EG A G+ + GS+ S + + + R Sbjct: 88 TPADALAVQKVVEGAIALHGGVPVRRIAHIRHISGSERVYSLRFSPLDNGPHPLLVVITR 147 Query: 124 DASVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 D + ++A + R + ++ + P+ + N A ++GY Sbjct: 148 DMTAQVAAENALRAAEGKYRAIFENAVEGIYQSTPDGTYLDVNPALARIYGYASPAELIA 207 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTR-TGEKIWIKASISPVYDVLAHL 238 + + R Q+L+ +T +D + R G IWI + V + Sbjct: 208 HFTDIASQLYVDGTKRGEFQRLMRETGEVRDFTAEVWRCDGHTIWITENARCVRGPDNEV 267 Query: 239 QNLVMTFSDITEERQIRQLE---GNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFA 295 T DIT +RQ ++ G + ++ E + + + + Sbjct: 268 LYYEGTVEDITAQRQSQETMRLLGKVFTSIAEGIVLLERDLTVRTVNPAFEAMTGLLRQD 327 Query: 296 LRNGMPIHWASSSH--------GAEIQNAQSWSATI--RQRDGAPAG----ILQIKTSSG 341 + +AS H AE+ A W I +R+G P + ++T +G Sbjct: 328 MEGRPARLFASGLHENDFLATVAAEVDRAGLWRGEIWGERREGPPYSGEMTVTAVRTRAG 387 Query: 342 AETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA 401 ET+ ++ + DI++ +++ +HI FD +T LPNR+ + + L+ + +A Sbjct: 388 -ETTHYVAAITDITK--------RKRDEEHIRFQANFDMLTHLPNRHLIMDRLEQAMHQA 438 Query: 402 VSPV----VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVL 457 V + +D + + DS G++ D+ L R R ++ + R+ G +F++ Sbjct: 439 QRTGRQVCVMFLDLDRFKQINDSYGHSAGDEVLKLTARRLRNCVRISDSVGRLGGDEFIV 498 Query: 458 VSLENDVSNI-TQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHN 514 + + + IA+++ +S+P I S+GI+Y D G+ LL A Sbjct: 499 ILSNVEDQHAGAYIAEKILYSLSEPFPIGGTEVFCIPSVGITYFPDHGETAPDLLRNADV 558 Query: 515 AMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYG 574 AM + ++ G + F+P M L + + L+ A++ ++ +L +QP++ L G Sbjct: 559 AMYHAKQGGERRYAIFTPDMARRSLALLTMESDLRHALARDEFELHFQPKVR-ADLTLIG 617 Query: 575 IEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSV 634 EAL RW P G + P FIPLAEE G I IGRW + EAC ++ WR++ + IP++SV Sbjct: 618 AEALIRWRHPEKGLINPGDFIPLAEESGLILPIGRWTLREACDRVMSWRAEGLTIPSVSV 677 Query: 635 NLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGL 694 N+S F+ L V + G++ L +EITE++M ++ L+D+GV L Sbjct: 678 NVSPRQFQDQTLVETVRQILVETGLEPEALDLEITETVMTGDVEHAVGTLRALKDLGVTL 737 Query: 695 SVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAE 754 S+DDFGTG+S L+ L + P+ +KID++FV L + A++ I ++ ++L +VVAE Sbjct: 738 SIDDFGTGYSSLNYLKTFPIDTLKIDQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVAE 797 Query: 755 GVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 GVE EQ E L C+ QG+ +SRPLP E ++ + Sbjct: 798 GVEEIEQAEFLGSRDCQNFQGFLYSRPLPPAEFTTFLRTAK 838 Score = 124 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 94/256 (36%), Gaps = 9/256 (3%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGY-KREEVIGNNIDMLIPR 63 +A AA+G + E + G + + NPA +++GY E+I + D+ Sbjct: 157 NALRAAEGKYRAIFENAVEGIYQSTPDGTYLDVNPALARIYGYASPAELIAHFTDIASQL 216 Query: 64 DLR-PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWT--RFALSKVSAEGKVYYLA 120 + E+ R RE G+ R ++ + DG IW + +YY Sbjct: 217 YVDGTKRGEFQRLMRETGEVR----DFTAEVWRCDGHTIWITENARCVRGPDNEVLYYEG 272 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 V D + + +E R L + +++L+ + + N AF M G + G Sbjct: 273 TVEDITAQRQSQETMRLLGKVFTSIAEGIVLLERDLTVRTVNPAFEAMTGLLRQDMEGR- 331 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 P L D + + + + E R G + +++ V + Sbjct: 332 PARLFASGLHENDFLATVAAEVDRAGLWRGEIWGERREGPPYSGEMTVTAVRTRAGETTH 391 Query: 241 LVMTFSDITEERQIRQ 256 V +DIT+ ++ + Sbjct: 392 YVAAITDITKRKRDEE 407 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 820 bits (2119), Expect = 0.0, Method: Composition-based stats. Identities = 219/833 (26%), Positives = 382/833 (45%), Gaps = 67/833 (8%) Query: 9 AADGIFFPALEQNMMGAVLIN-ENDEVMFFNPAAEKLWGYKREEV--IGNN-IDMLIPRD 64 + + A++ + + V+F N + GY +EE+ +G N + L+ D Sbjct: 581 EREKFWSDAVQAVPDTLYIHDLHARRVIFSNHHLGQQLGYNQEELARMGENFWETLLHPD 640 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAE--GKV-YYLAL 121 + + N + + +L+ +DG W S + G+V + + Sbjct: 641 DQEYYWRI--RNLQHVVGDGLLLDSQLRWRHRDGRWHWFDIREQAFSRDRSGRVARLIGV 698 Query: 122 VRDASVEM----AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 +D + + A +E R+ + +++ + D E + + + +FGY A Sbjct: 699 AKDITFTVEANNALRENGRRYRMLAENISDVIFSTDAELNASYVSPSVQHVFGYSPEWAL 758 Query: 178 --GMQPDT-----------LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWI 224 G+ LL +R +L +L + L G KI I Sbjct: 759 LNGLHQTATNPRQLGRLNGLLRRVRHAIGDRQKLAELRENPGQHLFALDCLRADGRKIPI 818 Query: 225 KASISPVYDVLAHLQNLVMTFSDITEERQIRQL--------EGNILAAMCSSPPFHEMGE 276 + I ++D + L+ DI+++R+ + E + A M + P + + Sbjct: 819 ELRIVLMWDEHDRFEGLLGIARDISQQRRAERELRMAATVFEHSTAAIMVTDPAGYIVQ- 877 Query: 277 IICRNIESVLNESHVSLFALRNGMPIHWASSSHG-----AEIQNAQSWSATI--RQRDG- 328 + + + S + + + ++ A +Q++ SW I +++ G Sbjct: 878 -VNDSFSRLTGYSPADVLDQQPRLLTADRQEANQLKHVLASLQHSGSWEGEILQKRKTGE 936 Query: 329 ---APAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLP 385 + GI ++ G S F+ +DIS E++ S + I +L +D +T LP Sbjct: 937 LYPSWVGITAVRDEEGDLVS-FVCFFSDIS--------ERKASERRIHRLAYYDALTHLP 987 Query: 386 NRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKL 441 NR + L + +A V+ + +D + + DSLG+A D+ L EV R + Sbjct: 988 NRTLFQDRLHTALQQAERNGQWVVLMFLDLDRFKPINDSLGHAAGDRMLQEVATRLSACV 1047 Query: 442 KPDQYLCRIEGTQFVLVSLENDVSNIT-----QIADELRNVVSKPIMIDDKPFPLTLSIG 496 D + R+ G +F L+ I Q+A+ + +++P ++ + F +T SIG Sbjct: 1048 SQDDTVARMGGDEFTLLLPSQGDREIALKRAIQVAELILGRLARPFTLEGREFFVTASIG 1107 Query: 497 ISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISN 554 ++ G L+ A AM + ++ G N +QF+ MN ERL L + L+ A+ Sbjct: 1108 VALSPQDGAELSLLMKNADTAMYHAKEMGKNNFQFYQAEMNARALERLELESDLRRALEL 1167 Query: 555 NQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAE 614 + L YQPQ + L G EAL RW P G VPPS FIP+ EEIG + +G W++AE Sbjct: 1168 GEFVLHYQPQFTGDGRRLTGAEALLRWQHPRRGLVPPSEFIPVLEEIGLVAQVGDWLLAE 1227 Query: 615 ACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMM 674 AC+QL W + +P +SVNLSA F QL +++ ++ GI L +E+TES++M Sbjct: 1228 ACKQLRSWHKAKVRVPKVSVNLSARQFADGQLGERIAAILYETGIPPACLELELTESILM 1287 Query: 675 EHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRIL 734 E + + L+ +G+ ++VDDFGTG+S L+ L P+ +KID+SFVD ++ Sbjct: 1288 SDVAEAMQILSGLKRLGLAIAVDDFGTGYSSLNYLKQFPIDVLKIDRSFVDGLPHGEQDA 1347 Query: 735 ALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 + AI ++ SLNL V+AEGVE++ Q + LR+ C +QGY F RP+PAE+ Sbjct: 1348 QIARAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQGYLFGRPMPAEQF 1400 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 53/273 (19%), Positives = 95/273 (34%), Gaps = 13/273 (4%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVI------- 53 ++ +A + E + + +P+ + ++GY E + Sbjct: 706 VEANNALRENGRRYRMLAENISDVIFSTDAELNASYVSPSVQHVFGYSPEWALLNGLHQT 765 Query: 54 ---GNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV 110 + L R H R + L + DG KI + + Sbjct: 766 ATNPRQLGRLNGLLRRVRHAIGDRQKLAELRENPGQHLFALDCLRADGRKIPIELRIVLM 825 Query: 111 SAEGKVY--YLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEM 168 E + L + RD S + + + R +H ++V DP +IVQ N +F+ + Sbjct: 826 WDEHDRFEGLLGIARDISQQRRAERELRMAATVFEHSTAAIMVTDPAGYIVQVNDSFSRL 885 Query: 169 FGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASI 228 GY ++ QP LL A+ + L + + E L +TGE I Sbjct: 886 TGYSPADVLDQQP-RLLTADRQEANQLKHVLASLQHSGSWEGEILQKRKTGELYPSWVGI 944 Query: 229 SPVYDVLAHLQNLVMTFSDITEERQIRQLEGNI 261 + V D L + V FSDI+E + + + Sbjct: 945 TAVRDEEGDLVSFVCFFSDISERKASERRIHRL 977 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 61/437 (13%), Positives = 133/437 (30%), Gaps = 87/437 (19%) Query: 15 FPALEQNMMGAVLINE-------NDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP 67 +L Q I+E + + + NP AE+L+G + +++ L+P DL P Sbjct: 288 QRSLRQAATALAAIDERVLVTRADGRLSYLNPQAERLFGISSAQARQHHLLGLLP-DLEP 346 Query: 68 AHPEYIRHNREG----GKARVEGMSRELQLEKKDGSKIWTRF----ALSKVSAEGKVYYL 119 + E RV G R L + + L + +G + Sbjct: 347 GWLTDAGGDGETRSELLPLRVRGEPRTFTLSRHPLASYPALADQAWTLREQILQGGQ--V 404 Query: 120 ALVRDASVEMAQ----KEQTRQLIIAVDHLDRPVIVLDPER------------------- 156 ++RD + E +E R+ + + + VLD Sbjct: 405 WVLRDVTEEQHALGVLEETRRRYQDIFEGVGVALCVLDLSALRQALVEQGLDSCAALRAW 464 Query: 157 ---------------HIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIR-LQQ 200 I + N + +E + + L + P P R++ ++ Sbjct: 465 LAGEPGRQQALLERIRITEINDVSRRLLQIDSTEQAWQR--LLDHGPLQPDSLRLQVIEA 522 Query: 201 LLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLE-- 258 L+ + + E L + + + + + ++ SD+T +++ Sbjct: 523 LIERRPVLELEATLRCGKSTPRHLWLQLR-LPENPGEWHAVTLSLSDVTSRKEVELSLIE 581 Query: 259 -----GNILAAMCSSPPFHE------------MGEIICRNIESVL--NESHVSLFALRNG 299 + + A+ + H+ +G+ + N E + E+ + Sbjct: 582 REKFWSDAVQAVPDTLYIHDLHARRVIFSNHHLGQQLGYNQEELARMGENFWETLLHPDD 641 Query: 300 MPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG----ILQIKTSSGAETSAFIERVAD 353 +W + + + + + R RDG + I D Sbjct: 642 QEYYWRIRNLQHVVGDGLLLDSQLRWRHRDGRWHWFDIREQAFSRDRSGRVARLIGVAKD 701 Query: 354 ISQHMAALALEQEKSRQ 370 I+ + A +E R+ Sbjct: 702 ITFTVEANNALRENGRR 718 Score = 45.8 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 55/196 (28%), Gaps = 20/196 (10%) Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 +A + RQ A+ +D V+V + + N +FG ++A LL Sbjct: 285 LASQRSLRQAATALAAIDERVLVTRADGRLSYLNPQAERLFGISSAQARQHHLLGLLPDL 344 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV------------YDVLA 236 E + E L L GE S P+ Sbjct: 345 EPG------WLTDAGGDGETRSELLPLRVRGEPRTFTLSRHPLASYPALADQAWTLREQI 398 Query: 237 HLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFAL 296 V D+TEE+ + F +G +C S L ++ V Sbjct: 399 LQGGQVWVLRDVTEEQHALGVLEETRR--RYQDIFEGVGVALCVLDLSALRQALVEQGLD 456 Query: 297 RNGMPIHWASSSHGAE 312 W + G + Sbjct: 457 SCAALRAWLAGEPGRQ 472 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 816 bits (2110), Expect = 0.0, Method: Composition-based stats. Identities = 207/813 (25%), Positives = 355/813 (43%), Gaps = 40/813 (4%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP 67 +F A +G+ + ++ AA +L G E + + + Sbjct: 77 RRNQALFQEAQLSAQLGSWEYDSARREFLWSGAARQLLGLPASET--RTERGTLLQRVAA 134 Query: 68 AHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALS-KVSAEGKVYYLALVRDAS 126 + + A G S E + +W R + E L +++D S Sbjct: 135 GDRARVATVLDAMLAEGSG-SVEFCRAGTGAAPVWLRLHYQVHLDEEAPGLVLGVLQDIS 193 Query: 127 VEMAQ----KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPD 182 V+ AQ +E+ + + + L + H ++ N+ ++ GY E + Sbjct: 194 VQKAQDDALREREQLFRGTFEQAAVGIAHLGLDGHWIRVNQRLCDILGYSREELLRLTLQ 253 Query: 183 TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 + + + +D + + L + E R G+ +W + + + D + + Sbjct: 254 DITHPADQDSDLVMTRRLLSGEIPSFSIEKRYRQRRGQLVWANLTAALMRDEGGRPEYFI 313 Query: 243 MTFSDITEERQIRQLEG---NILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNG 299 + DI+ +Q + + + +M + I + + + AL Sbjct: 314 LVVEDISARKQSEEAQQLALTVFDSMLEGVIITDHHRRILAVNAAFGEITRYPVEALLGR 373 Query: 300 MPIHWASSSHGAEIQN--------AQSWSATI--RQRDGAPAGI---LQIKTSSGAETSA 346 P W ++ A + W + R+RDG P + + Sbjct: 374 TPPLWRTAHQDAAFYRRIWRQLLASGRWEGELWHRKRDGTPFPLWLSISCVRDEQGRPRQ 433 Query: 347 FIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPV- 405 ++ DISQ + S++ +E+L +DP+TGLPNR+ L+ +++A Sbjct: 434 YVFVFNDISQ--------LKDSQEQLERLAHYDPLTGLPNRHLALARLEHALERARRHAF 485 Query: 406 ---VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN 462 V I +D + + DSLG+ D+ L+ + R ++L+ + L R+ G +F++V E Sbjct: 486 PLAVMFIDLDRFKTINDSLGHQAGDELLVAIAQRLHQRLRQEDTLARLGGDEFLVVIEEA 545 Query: 463 DVSNITQIADELRNVVSKPIMI-DDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYI 519 V + IA L VV +P + SIGIS G++ L+ A AM Sbjct: 546 PVQQVASIAHALLKVVDQPFGFSGGGEAYVGASIGISLYPGDGRSASELIRNADAAMYLA 605 Query: 520 RKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALA 579 + G N ++F++ ++ ERL + +L+ A+ + L YQP + +G + G E L Sbjct: 606 KAQGSNAYRFYTESLTRAANERLSMETSLRRALRCEEFVLHYQPLVELASGRVLGAEVLV 665 Query: 580 RWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSAL 639 RW P VPPSRFIPLAEE G I +G WV+ EACRQ W + + L+VNLS Sbjct: 666 RWQPPGEALVPPSRFIPLAEETGLIVPLGDWVLHEACRQGKAWLDAGLPLL-LAVNLSPR 724 Query: 640 HFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDF 699 F + L QV A+ G+ QL +E+TE +ME + K + L+ +GV L++DDF Sbjct: 725 QFLRHDLVGQVRKALQGSGLPPAQLELELTEGALMEQAEQAVKTLHALKRLGVSLAIDDF 784 Query: 700 GTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETK 759 GTG+S L+ L P+ ++KID+SFV + ++ I ++ ++L L +AEGVET Sbjct: 785 GTGYSSLAYLKRFPLDKLKIDRSFVRDLPRDSSDAEIVTTIIAMVRNLKLEALAEGVETP 844 Query: 760 EQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 +Q LR++ C QGY FS PLPAE W+ Sbjct: 845 QQLAFLRQLGCDSGQGYLFSPPLPAEAFERWLR 877 Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 99/259 (38%), Gaps = 6/259 (2%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 DA + +F EQ +G + + + N + GY REE++ + + Sbjct: 200 DALREREQLFRGTFEQAAVGIAHLGLDGHWIRVNQRLCDILGYSREELLRLTLQDITHPA 259 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLALV 122 + + + R + S E + ++ G +W + + EG Y++ +V Sbjct: 260 DQDS---DLVMTRRLLSGEIPSFSIEKRYRQRRGQLVWANLTAALMRDEGGRPEYFILVV 316 Query: 123 RDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPD 182 D S +E + + D + VI+ D R I+ N AF E+ Y + G P Sbjct: 317 EDISARKQSEEAQQLALTVFDSMLEGVIITDHHRRILAVNAAFGEITRYPVEALLGRTPP 376 Query: 183 TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 L A R+ + L + R + E R G + SIS V D + V Sbjct: 377 -LWRTAHQDAAFYRRIWRQLLASGRWEGELWHRKRDGTPFPLWLSISCVRDEQGRPRQYV 435 Query: 243 MTFSDITEERQIRQLEGNI 261 F+DI++ + ++ + Sbjct: 436 FVFNDISQLKDSQEQLERL 454 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 816 bits (2109), Expect = 0.0, Method: Composition-based stats. Identities = 205/807 (25%), Positives = 376/807 (46%), Gaps = 50/807 (6%) Query: 14 FFPALEQNMMGA-VLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEY 72 F L+++ +G V + V+F N ++ G E+ IG++ D + E Sbjct: 10 FLGILDESPVGVSVSRRRDGLVLFVNRRFCQITGMTPEQCIGHSARRHFADDDQR--LEV 67 Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQK 132 +R +E G+ +++ + DGS W+ + + G+ LA + D S + Sbjct: 68 VRQLKEAGEIA----DADVKFFRVDGSSFWSVLTIRSATLNGEAVNLAWLYDVSKRKQAE 123 Query: 133 EQ----TRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 + + +D +++++ E I+ N A + +F + G L Sbjct: 124 QAILDGKTLIRAMLDSSTDGIVLVNAEGTILAVNAAASAIFEKNSDDLPGKAIWDHLPDS 183 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 R + ++L + + + + + V D + + + D+ Sbjct: 184 VVAPMRRG-IDRVLDRRETVESHHAIGAK-----LFDVHMHLVADSVGQRDRVAIFSRDV 237 Query: 249 TEERQIRQLEGNILAAMCSSP------PFHEMGEIICRNIESVLNESHVSLFA-----LR 297 T+ Q RQ + A+ +P H E + R V S + L+ Sbjct: 238 TQSHQRRQQLRKLETALEQAPVSVMITDSHGAIEYVNRAFVLVSGYSEDEVLGRNPRLLK 297 Query: 298 NGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG----ILQIKTSSGAETSAFIERV 351 +G + + + +W + R +DG+ I I+ G + F+ Sbjct: 298 SGETVASLYRDMWHCLASGATWQGELCNRAKDGSLFWEYATISPIRDDDGV-VTHFMAVK 356 Query: 352 ADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA----VSPVVY 407 +I+Q ++++ Q + D +TGLPNR L + + ++ A + Sbjct: 357 ENITQ--------RKETEQQLVHQATHDTLTGLPNRLLLEDRVHHAIEVAKREGRRIGLM 408 Query: 408 LIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSN 466 + +D + V DSLG+ D+ L V +R R L+ + R+ G +FV+V + Sbjct: 409 FLDLDRFKIVNDSLGHVAGDELLKVVSDRLRHTLRRSDTVARLGGDEFVVVLTHFQSTTE 468 Query: 467 ITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGG 524 + ++A+++ + +P+ + + SIGI+ D G N + L+ A AM ++ G Sbjct: 469 LAEVAEKISAALDEPVELSGHKVHVGASIGIAIYPDDGDNFNALMKDADTAMYRAKQKGR 528 Query: 525 NGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDP 584 N + F+ MN+ +RL L AL+ A+ + +L YQPQ+ +TG G+EAL RW+ P Sbjct: 529 NTFCFYDSNMNDEALDRLKLEEALRRALVRGEFQLFYQPQVDLQTGRTSGVEALIRWNSP 588 Query: 585 LHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSN 644 G V P+ FIP+AEE I IG WV+ E+CRQ+A WR + ++VN+S F ++ Sbjct: 589 ERGQVSPALFIPVAEESNLISMIGWWVLEESCRQIAAWREAGLTGIKVAVNVSGRQFLNH 648 Query: 645 QLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFS 704 L +SD M + + QL +E+TES +M +++ LR++G+ +SVDDFGTG+S Sbjct: 649 ALVECISDLMAQYAVLPSQLEIELTESTVMAEPDRAIEQLTRLREIGIQVSVDDFGTGYS 708 Query: 705 GLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEM 764 LS L LP++ IK+D+SFV + A++ AI + +L++++VAEGVET+ + + Sbjct: 709 SLSYLKRLPLSTIKVDRSFVRDVNNQSDNAAIVSAILGLADALDMSIVAEGVETEGEEQH 768 Query: 765 LRKIHCRVIQGYFFSRPLPAEEIPGWM 791 L+ C +QG+ +++P+PA+++ WM Sbjct: 769 LKDAGCIKVQGFRYAKPMPADQLAAWM 795 >UniRef50_C1DIM2 Cyclic di-GMP signal transduction protein n=5 Tax=Proteobacteria RepID=C1DIM2_AZOVD Length = 1196 Score = 812 bits (2099), Expect = 0.0, Method: Composition-based stats. Identities = 324/846 (38%), Positives = 490/846 (57%), Gaps = 61/846 (7%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 M + + + + AL+++ + A LI+E + V+FF+ AAE+LWG R+EV+G + ++ Sbjct: 6 MVMENVIVEVEDVPLAALDRSALVAALIDERNRVVFFSQAAERLWGLGRDEVLGRDAGLV 65 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYY-- 118 + L R + A + G + L ++ +DG +I F+ S + +G++++ Sbjct: 66 LSPGLSS------RGDTPSSGADLPGSGQTLAVKCRDGRQIGVFFSRSAIEIDGRLFHLL 119 Query: 119 LALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 +AL + + RQL++A+DH D+P++V + +R IV NRAFTE FGY + E G Sbjct: 120 VALSPEGMPDGVMGRANRQLLMAIDHTDQPMLVFNAQRQIVHVNRAFTESFGYELGEVLG 179 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV-YDVLAH 237 ++P + P A++ R + L W R Q E L+ + G W++ S SP D + Sbjct: 180 LEPMAVFPSPNVSAEDLARHRSLPWGRERFQTEMLVRRKNGSDFWVRISSSPFDGDEVDE 239 Query: 238 LQNL-VMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFAL 296 L V +DITEERQIR LE +L A+ SS F E+G +CR IE++ S++ + Sbjct: 240 LNGYSVDVLADITEERQIRSLEHEVLEALTSSLSFEEVGNCLCRCIEAIAPGVIASVWRI 299 Query: 297 RNGMPIHWAS---------SSHGAEIQNA------------------------------- 316 G WA+ + G EI Sbjct: 300 AEGRIRPWAAPQFPPECSAAWDGVEIGEGVASCGTTAYRGEPVMVRDIASDALWASYKHL 359 Query: 317 -------QSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSR 369 WS +++RDG+ AG G + +ER+A+ S H+ ALA+E+E+ R Sbjct: 360 ILPYGLRACWSYPVKRRDGSVAGTFAFYFREGGGPDSHLERIAEASVHLCALAIEREEDR 419 Query: 370 QHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV--SPVVYLIGVDHIQDVIDSLGYAWAD 427 Q + +L+Q D +TGLPNR++L +D+L+ A + +G+D +D+ ++LG+A D Sbjct: 420 QQMNRLVQLDTLTGLPNRSHLLRRIDELLVSATWGDIACFNLGLDRFKDINEALGHAEGD 479 Query: 428 QALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDK 487 Q L+ + NR + L+P Q+L R EG FV+V+ + DV + + +A+ L V++ I + Sbjct: 480 QVLVAMANRLQRHLRPGQFLSRSEGDLFVVVAPDCDVRSASLMAERLLQTVAEQIEVGGH 539 Query: 488 PFPLTLSIGISYDL--GKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLG 545 L+ S+GIS G++RD LL+ A +AM +++ GG G+QFF P MN +++RL+L Sbjct: 540 ALNLSASVGISLYPEGGQDRDALLANAKSAMYRVKRTGGGGYQFFIPEMNRALQDRLLLS 599 Query: 546 AALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIE 605 AALK AI+ + L L YQPQ+ +GELYG EALARWHD G +PP++FI LAEE G+IE Sbjct: 600 AALKRAIAGDGLSLHYQPQVHTVSGELYGFEALARWHDDEFGDIPPTKFIGLAEETGQIE 659 Query: 606 NIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLT 665 IGRW + EACRQLAEWR +P +SVNLS ++F S LP V+ + + + G LT Sbjct: 660 AIGRWALREACRQLAEWREGGAMVPTVSVNLSPINFHSRDLPEFVAGLLREFALPGASLT 719 Query: 666 VEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVD 725 +EITES MM E+ + +R +GVGLSVDDFGTGFS LS L++LPVTE+KID+SF+D Sbjct: 720 IEITESTMMALTPEMLDIVHGIRSLGVGLSVDDFGTGFSSLSNLINLPVTEVKIDRSFID 779 Query: 726 RCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAE 785 +CL E R+ +L+ A+ IG SL+LTVVAEGVET+EQ ++L + C V+QGY FSRP+ Sbjct: 780 KCLEENRLQSLVAAVVGIGHSLDLTVVAEGVETREQRDLLGEYRCPVLQGYIFSRPMSPC 839 Query: 786 EIPGWM 791 E W+ Sbjct: 840 EAIKWL 845 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 77/179 (43%), Gaps = 5/179 (2%) Query: 366 EKSRQHIEQLIQFDPMTGLPNRNNLHN--YLDDLVDKAVSPVVYLIGVDHIQDVIDSLGY 423 ++ + + + DP+T + NR L + + ++ +D + + D+ G+ Sbjct: 1009 KRDSRLLREYAFLDPLTKVANRRGLQEWWRNETSGGRQRRLAFLMVDLDGFKPINDTHGH 1068 Query: 424 AWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPI 482 D AL V +R + ++ +CR+ G +F L +E + I + + + +P+ Sbjct: 1069 DVGDAALCMVADRLKAVVRDTDLVCRLGGDEFGLAMVEVEGCGQMEAICERIVASLGEPM 1128 Query: 483 MIDDKPFPLTLSIGISYDLGKNRD--YLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVK 539 I ++ S+G + D LL A A+ ++K G +GW ++ P + + Sbjct: 1129 DIGGSSVRISASVGGCLYPDQAADKRELLQRADRALYRVKKAGKSGWGWWEPEQRKTAR 1187 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 811 bits (2095), Expect = 0.0, Method: Composition-based stats. Identities = 212/812 (26%), Positives = 370/812 (45%), Gaps = 42/812 (5%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 F L + L + + N A + G E+IG +P + A E Sbjct: 282 FEAWLRNSPNVMSLKDLEGRYLLVNRAYSRALGKAPAELIGKKSADFLPPEEARATAEQD 341 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA-LVRDAS----VE 128 R ++R + L L+ G + T+F L A+G + + D + Sbjct: 342 RQVLSALESR--QYEQTLTLDGLPGDFLVTKFPL--FDADGLPAGIGCIATDITQNKRER 397 Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 A++E + ++ + +L E + N EM GY E G + +T+L Sbjct: 398 QAKQEAENRYHALIEQSLVGIYILQDE-CLAYVNDKLAEMLGYPGEELQGERIETVLAHE 456 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 E + Q+L + L+ + G+ + ++ S +++ ++ DI Sbjct: 457 ERQRLRQQITQRLSENISIMHFSARLVRKDGQLLDVEIH-SRLFEYRGR-SAIIGVVVDI 514 Query: 249 TEERQIRQLEG---NILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWA 305 ++ Q + + I ++ + + + + Sbjct: 515 SDRVQADANQKLASKVFENAAEGILITGADYRIIAVNQAFTRITGYPPELVIGRVSRIFR 574 Query: 306 SSSHGA-----EIQNAQSWSATIRQRDGAPAG------ILQIKTSSGAETSAFIERVADI 354 ++ + + W + R + I ++ +GA + ++ ADI Sbjct: 575 DNTSWSVAMLDGLARHGHWQGEMLDRRRSHEWYPAELSISAVRDDAGA-ITNYVGVFADI 633 Query: 355 SQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNL----HNYLDDLVDKAVSPVVYLIG 410 + ++++ + ++ L DP+T LPNR+ L + + + V + Sbjct: 634 TV--------RKQAEERLQFLANHDPLTRLPNRSWLIACLEDRIQQIASSGQQVAVMFLD 685 Query: 411 VDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQ 469 +D + + DS G+ D+ L E +R + + + R+ G +F L+ + ++ Sbjct: 686 LDRFKLINDSFGHQTGDELLRETASRLEQVVGGRGQIARLGGDEFTLLVSHFASQATLST 745 Query: 470 IADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGW 527 +A+++ V+++P+ ++ + +T S+GIS G + LL A AM ++ G N + Sbjct: 746 LAEDILAVLAQPLWLEGQELIVTGSLGISVYPHDGSDARTLLKNADVAMYRAKEAGKNTY 805 Query: 528 QFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHG 587 QFF+ MN ERL L L++A+ + +L +QP + A T L +E L RW P G Sbjct: 806 QFFAAEMNAQAIERLQLERGLRQALERGEFELHFQPIVAAATYRLEALEVLLRWRHPELG 865 Query: 588 HVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLP 647 V P RFIPLAEE G I IG WVI +ACRQLAEW +H+P L++NLSA F L Sbjct: 866 LVSPVRFIPLAEETGLIRPIGDWVIRQACRQLAEWDCLGLHVPRLAINLSARQFEQQGLI 925 Query: 648 NQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLS 707 QV+ A+ GI +L +E+TESM+M++ +E + L+ +GV LS+DDFGTG+S LS Sbjct: 926 MQVAGALAEAGIAAGRLELEMTESMVMQNPSEAVSLLGELKALGVRLSIDDFGTGYSSLS 985 Query: 708 RLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRK 767 L P+ +KID+SF++ + A+ EAI ++ + L+ +VVAEGVET+ Q L Sbjct: 986 YLKRFPLDTLKIDRSFIEGLPGDGDNAAIAEAILAMARKLSFSVVAEGVETEAQAAFLCA 1045 Query: 768 IHCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI 799 C+++QGY FSRPLPA E+P ++ P + Sbjct: 1046 KGCQLLQGYLFSRPLPAAELPAFLQQRSPQPL 1077 Score = 85.9 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 88/252 (34%), Gaps = 20/252 (7%) Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 ++ + + + + + D E + NRA++ G +E G + L P Sbjct: 273 RQLQDSLARFEAWLRNSPNVMSLKDLEGRYLLVNRAYSRALGKAPAELIGKKSADFLP-P 331 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 E + +Q+L Q E LT G + P++D + +DI Sbjct: 332 EEARATAEQDRQVLSALESRQYE-QTLTLDGLPGDFLVTKFPLFDADGLPAGIGCIATDI 390 Query: 249 T----EERQIRQLEGNILAAMCSSPPF-------------HEMGEIICRNIESVLNESHV 291 T E + ++ E A + S ++ E++ E + E Sbjct: 391 TQNKRERQAKQEAENRYHALIEQSLVGIYILQDECLAYVNDKLAEMLGYPGEELQGERIE 450 Query: 292 SLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGI-LQIKTSSGAETSAFIER 350 ++ A + + +E + +SA + ++DG + + + SA I Sbjct: 451 TVLAHEERQRLRQQITQRLSENISIMHFSARLVRKDGQLLDVEIHSRLFEYRGRSAIIGV 510 Query: 351 VADISQHMAALA 362 V DIS + A A Sbjct: 511 VVDISDRVQADA 522 Score = 67.0 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 54/378 (14%), Positives = 109/378 (28%), Gaps = 45/378 (11%) Query: 9 AADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPA 68 A + E G ++ + ++ N A ++ GY E VIG + Sbjct: 522 ANQKLASKVFENAAEGILITGADYRIIAVNQAFTRITGYPPELVIGRVSRIFRDNTSWSV 581 Query: 69 HPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVY--YLALVRDAS 126 G AR E+ ++ ++S V + Y+ + D + Sbjct: 582 A-------MLDGLARHGHWQGEMLDRRRSHEWYPAELSISAVRDDAGAITNYVGVFADIT 634 Query: 127 VEMAQKEQT------------------------RQLIIAVDHLDRPVIVLDPERHIVQCN 162 V +E+ R IA V+ LD + N Sbjct: 635 VRKQAEERLQFLANHDPLTRLPNRSWLIACLEDRIQQIASSGQQVAVMFLDLD-RFKLIN 693 Query: 163 RAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRT---- 218 +F G + + + + ++ A LL Q L Sbjct: 694 DSFGHQTGDELLRETASRLEQVVGGRGQIARLGGDEFTLLVSHFASQATLSTLAEDILAV 753 Query: 219 -GEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEM--G 275 + +W++ V L + SD ++ + + A + ++ Sbjct: 754 LAQPLWLEGQELIVTGSLG-ISVYPHDGSD--ARTLLKNADVAMYRAKEAGKNTYQFFAA 810 Query: 276 EIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQ 335 E+ + IE + E + R +H+ A ++ +R R + Sbjct: 811 EMNAQAIERLQLERGLRQALERGEFELHFQP-IVAAATYRLEALEVLLRWRHPELGLVSP 869 Query: 336 IKTSSGAETSAFIERVAD 353 ++ AE + I + D Sbjct: 870 VRFIPLAEETGLIRPIGD 887 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 810 bits (2094), Expect = 0.0, Method: Composition-based stats. Identities = 211/727 (29%), Positives = 343/727 (47%), Gaps = 48/727 (6%) Query: 101 IWTRFALSKVSAEGKVYYLALVRDASV------EMAQKEQTRQLIIAVDHLDRPVIVLDP 154 +++R + + + + VR AS E KE +L VD + ++V+DP Sbjct: 241 VFSRRPIRETHLAASMLQVFAVRAASELERRQAERVLKETEARLKTIVDSVHTGILVIDP 300 Query: 155 ER-HIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFL 213 E IV N G E G + E LQQ L RD Sbjct: 301 ENHRIVDVNELAASSLGRTREEMIGTSCHRFICPNEEGRCPITDLQQELDNEERD----- 355 Query: 214 LLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQL----EGNILAAMCSSP 269 L+ G ++ + ++S V VL ++L+ +F DI+ +Q+ E + + Sbjct: 356 LIRADGSRLPVIKTVSRV--VLDGREHLLESFVDISRRKQVENSLKESEERYRMLVENQA 413 Query: 270 PFHEMGE--------------IICRNIESVLNESHVSLFALRNGMPIHWASSSH-GAEIQ 314 + + + E +L ++ + + L + ++ Sbjct: 414 DLVIKTDMTGNLLFVSPSFCKLFGQTEEKLLGKALLPVIMLPEQLATAAGMEQMICSDTS 473 Query: 315 NAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQ 374 + + + R+ L+ + + A I DI+ +++ + IEQ Sbjct: 474 YYREYLSPTREGKRWIGWALRCIFNQSGQAEAIIGMGRDIT--------DRKTAESTIEQ 525 Query: 375 LIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQAL 430 L DP+TGLPNR LH+ L +++A + + +D + + DSLG+A DQ L Sbjct: 526 LAYHDPVTGLPNRTLLHDRLQLAINRAERDSQGVAILFLDLDRFKAINDSLGHAMGDQLL 585 Query: 431 LEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNI-TQIADELRNVVSKPIMIDDKPF 489 V NR + ++ + R+ G +FV++ D + + ++ + +P IDD Sbjct: 586 RLVGNRLLDCVRSSDTVARLGGDEFVVLISALDNDHAVGSVVMKILEQLCEPYQIDDHEV 645 Query: 490 PLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAA 547 + SIGIS G++ + LL A AM ++ G N FFSP +N ERL+L + Sbjct: 646 YTSSSIGISLFPRDGRDAEELLKNADMAMYQAKEAGRNTCHFFSPELNMRATERLLLEST 705 Query: 548 LKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENI 607 ++ A+ + LVYQPQ+ +G + GIEAL RW P G VPP+ FIP+AEE G I + Sbjct: 706 MRRALEREEFFLVYQPQMELRSGHIAGIEALLRWRHPDLGVVPPNNFIPIAEETGLIVPL 765 Query: 608 GRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVE 667 G WV+AEACRQ W+ + ++VN+SA FR L ++ + G+D L +E Sbjct: 766 GEWVLAEACRQAVRWQQEGQPPLRMAVNVSARQFRQRNLGLRIEKILMETGLDPALLELE 825 Query: 668 ITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRC 727 +TES +ME+ E ++ L+ MG+ LS+DDFGTG+S LS L P+ +KID+SFV Sbjct: 826 LTESAVMENPEEAILTLRQLKKMGITLSIDDFGTGYSSLSHLKHFPIDRLKIDRSFVKHV 885 Query: 728 LTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 + + EAI ++ S+ LTVVAEG+E EQ E + + HC +QGY+ SRP+ AEE Sbjct: 886 TRDHNDATIAEAIIALAHSMKLTVVAEGIEHSEQMEFMHQRHCDTMQGYYLSRPVTAEEF 945 Query: 788 PGWMSSV 794 ++ + Sbjct: 946 GTFLKRL 952 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 101/259 (38%), Gaps = 15/259 (5%) Query: 8 NAADGIFFPALEQNMMGAVLINEND-EVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 + ++ G ++I+ + ++ N A G REE+IG + I + Sbjct: 278 KETEARLKTIVDSVHTGILVIDPENHRIVDVNELAASSLGRTREEMIGTSCHRFICPNEE 337 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDAS 126 P + R L + DGS++ +S+V +G+ + L D S Sbjct: 338 GRCPITDLQQELDNEER--------DLIRADGSRLPVIKTVSRVVLDGREHLLESFVDIS 389 Query: 127 VEMA----QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPD 182 KE + + V++ VI D +++ + +F ++FG + G Sbjct: 390 RRKQVENSLKESEERYRMLVENQADLVIKTDMTGNLLFVSPSFCKLFGQTEEKLLGKALL 449 Query: 183 TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 ++ +PE A Q + T+ + E+L TR G++ WI ++ +++ + ++ Sbjct: 450 PVIMLPEQLATAAGMEQMICSDTSYYR-EYLSPTREGKR-WIGWALRCIFNQSGQAEAII 507 Query: 243 MTFSDITEERQIRQLEGNI 261 DIT+ + + Sbjct: 508 GMGRDITDRKTAESTIEQL 526 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 52/140 (37%), Gaps = 7/140 (5%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 ++ ++ ++ + +E + + ++F +P+ KL+G E+++G + +I Sbjct: 393 QVENSLKESEERYRMLVENQADLVIKTDMTGNLLFVSPSFCKLFGQTEEKLLGKALLPVI 452 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYL 119 + A + + RE ++G + W + S + + + Sbjct: 453 MLPEQLATAAGMEQMICSDTS----YYREYLSPTREGKRWIGWALRCIFNQSGQAEA-II 507 Query: 120 ALVRDASVEMAQKEQTRQLI 139 + RD + + QL Sbjct: 508 GMGRDITDRKTAESTIEQLA 527 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 810 bits (2094), Expect = 0.0, Method: Composition-based stats. Identities = 215/824 (26%), Positives = 369/824 (44%), Gaps = 45/824 (5%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINEND-EVMFFNPAAEKLWGYKREEVIGNNIDM 59 ++ A D F + + + + + + + N AA + +GY E +G I Sbjct: 233 LRSARALARNDERFRSLFDDHTVPMYIFDRDTLRFLAVNTAAIEQYGYTESEFLGMTIRA 292 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL 119 + P ++ + + + M+ + +KDGS I + ++ G+ Sbjct: 293 IRPTSEVARLERHLARSADL--RQSHTMAGIWRHRRKDGSIISVNVSYHALNFMGRDASF 350 Query: 120 ALVRDASVEMAQK----EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 L D + ++ + + L +D++ + + D + CN AF G E Sbjct: 351 VLADDVTDQINAEAEALRSNQMLEAVIDNIPQRIFWKDLNSRYLGCNMAFARDAGLAYPE 410 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEF-LLLTRTGEKIWIKASISPVYDV 234 + DT L F AD + + T + F + G S P D Sbjct: 411 QVVGKSDTDLPWRAF-ADLLNEHDREVASTGVPKMNFEVDFVIDGVHRTRVTSKLPFTDG 469 Query: 235 LAHLQNLVMTFSDITEER--------QIRQLEGNILAAMCSSP-PFHEMGEIICRNIESV 285 + ++ +++DITE++ Q R L+ ++ A + ++P P + E + + Sbjct: 470 DGQVIGVLGSYTDITEQKRADLALRLQSRALDASVNAILITAPSPSGNLIEYVNPAFMRI 529 Query: 286 LNESHVSLFALRNGMPIHWASSSHG-----AEIQNAQSWSATIR--QRDGAPAG----IL 334 + + G + + SA +R ++DGA I Sbjct: 530 TGYDLDEVIGHDCRVLQRDDRDQEGVALIREALAANREVSAVVRNYRKDGALFWNQLFIA 589 Query: 335 QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYL 394 + + G + I + D+++ + + ++ +E +D +T LPNRN L + L Sbjct: 590 PVPNAEGV-ITHHIGVINDVTELI--------RYQEQLEYQANYDGLTRLPNRNLLRDRL 640 Query: 395 DDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRI 450 + + A V + +D ++V DSLG++ D+ L V R + + R Sbjct: 641 EHALVVAQRHHTGVAVVFLDLDGFKNVNDSLGHSVGDRLLGVVAERLARCSRTSDTVARH 700 Query: 451 EGTQFVLVSLEN-DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDY 507 G +FV+V + D ++ + +R +++P+ +D + S+G S G + + Sbjct: 701 GGDEFVIVMTDTVDEQSLITWMERVRASIAEPVWLDGTELYVGCSMGASLFPQDGDDAET 760 Query: 508 LLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFA 567 L+ A AM + G N +QF+ P MN RL L L+ A+ +N+ L YQPQ+ Sbjct: 761 LMKKADVAMYRAKDMGRNTFQFYQPEMNASAGARLNLERRLRRALRDNEFLLHYQPQVDI 820 Query: 568 ETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNI 627 +G++ GIEAL RWHDP G VPPS FIPLAEE G I + WV+ EACRQ W+ Q + Sbjct: 821 VSGQIVGIEALVRWHDPEAGLVPPSSFIPLAEESGLIGPLSEWVLREACRQNKAWQDQGL 880 Query: 628 HIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQIL 687 +SVNLSA F+ + V + G++ L +E+TES +M + E + L Sbjct: 881 PPARVSVNLSARVFQQRNIAKLVMQVLAETGLEPRYLELELTESTIMRNAEEAVLMLNEL 940 Query: 688 RDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSL 747 +G+GL++DDFGTG+S LS L PV +KID+SFV + AI ++ SL Sbjct: 941 HALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGVSGDDETITSAIIALAHSL 1000 Query: 748 NLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 L V+AEGVET Q + L++ C +QG++F++PL E I + Sbjct: 1001 KLQVIAEGVETSAQLDFLKERACDEMQGFYFAKPLSTEGISELL 1044 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 810 bits (2092), Expect = 0.0, Method: Composition-based stats. Identities = 196/813 (24%), Positives = 348/813 (42%), Gaps = 47/813 (5%) Query: 12 GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEV-IGNNIDMLIPRDLRPAHP 70 A G +I ++++ N A ++ GY ++ +G++ LI R Sbjct: 314 DALLHAQADVNEGVAII-HRGKIVYGNDALWRIGGYSPGDIPLGSDFFSLIHPSDRKRVS 372 Query: 71 EYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMA 130 E + + E K+G I A ++ + + ++ +S + A Sbjct: 373 EIYQQRLQDMDVP---TRYEALGLGKNGRAIHIEIAAAQYRDDSQRIVTLIIDISSRKKA 429 Query: 131 QKE---QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE---ASGMQPDTL 184 + E + V+ + V P ++ + GY +++ G D + Sbjct: 430 EAELVKSQQDYRELVESVQAIVWRAIPGGKFTFVSKEAEALLGYPLAQWTTDPGFWVDKI 489 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYD-VLAHLQNLVM 243 R + L K ++ ++ G +W+K + + + LV Sbjct: 490 HPDDRDWVVEYCRTESL--KLQSFDFDYRMIAADGRVVWMKDIVKVIPNMSNTRPAELVG 547 Query: 244 TFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIE------SVLNESHVSLFA-- 295 DIT + ++ + + R +E + + Sbjct: 548 VMLDITASKAAEADLRLARQVFDNTAEGIVITDPAFRVLEVNQAYQQITGYDKEEIIGKL 607 Query: 296 ---LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGA----PAGILQIKTSSGAETSA 346 ++ G+ ++ W I R++ G I Q+ + G+ Sbjct: 608 PSVMQAGLHEAAYYEGIWQTLRREGQWVGEIWNRRKSGESYPEWLSISQVADAKGS-VQN 666 Query: 347 FIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS--- 403 ++ DI+Q ++ S + ++ L D +T LPNR L +D + +A Sbjct: 667 YVAVFTDITQ--------RKLSEERLQFLANHDALTHLPNRALLQERIDQALFRAQRNKT 718 Query: 404 -PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN 462 V I +D + + D+LG+ D L E R +E L+ + R G +FV++ + Sbjct: 719 AIAVLFIDLDRFKIINDTLGHQTGDMLLQEAAKRLKECLRETDTVARQGGDEFVVLVEDC 778 Query: 463 -DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYI 519 D + IA ++ +++P ++ + ++ SIGIS D G + LL A AM Sbjct: 779 GDTDYLNTIARKIMATLAQPFILVGRELFISASIGISVYPDDGLDTASLLKHADAAMYRA 838 Query: 520 RKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALA 579 +++G N ++F++ N E L L L+ A+ N+ L YQP++ + ++ G EA+ Sbjct: 839 KESGKNTFRFYAAEANTNSVELLTLENNLRRAVERNEFVLHYQPKVDLRSQKIIGAEAVV 898 Query: 580 RWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSAL 639 RW P G + P +FIPLAEE G I +IG W++ E+CRQ EW+ ++VNLSA Sbjct: 899 RWQHPELGMLSPMQFIPLAEETGLIIDIGAWIMRESCRQAVEWQQLTGQNVRVAVNLSAR 958 Query: 640 HFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDF 699 FR L ++DA+ G+ L +EITESM+M + + +Q D+G + +DDF Sbjct: 959 QFRDETLRQTIADALTESGLTPDCLELEITESMIMHNAERAREVLQHFHDLGAHVLIDDF 1018 Query: 700 GTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETK 759 GTG+S L P+ +KID+SFV + +A+ +AI ++ SL + VVAEGVET+ Sbjct: 1019 GTGYSSFGYLKHFPIDSLKIDRSFVRDIPDDVDDMAITQAIIAMAHSLQIKVVAEGVETQ 1078 Query: 760 EQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 EQ L+K C IQG+ FS PL + + + Sbjct: 1079 EQLAFLKKQGCDQIQGFLFSEPLHSHDFVRMLK 1111 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 95/261 (36%), Gaps = 12/261 (4%) Query: 10 ADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVI---GNNIDMLIPRDLR 66 + + +E + F + AE L GY + G +D + P D Sbjct: 436 SQQDYRELVESVQAIVWRAIPGGKFTFVSKEAEALLGYPLAQWTTDPGFWVDKIHPDD-- 493 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEG---KVYYLALVR 123 +++ +++ + ++ DG +W + + + + ++ Sbjct: 494 ---RDWVVEYCRTESLKLQSFDFDYRMIAADGRVVWMKDIVKVIPNMSNTRPAELVGVML 550 Query: 124 DASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDT 183 D + A + R D+ +++ DP +++ N+A+ ++ GY E G P Sbjct: 551 DITASKAAEADLRLARQVFDNTAEGIVITDPAFRVLEVNQAYQQITGYDKEEIIGKLPS- 609 Query: 184 LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVM 243 ++ A + Q L + + E ++GE SIS V D +QN V Sbjct: 610 VMQAGLHEAAYYEGIWQTLRREGQWVGEIWNRRKSGESYPEWLSISQVADAKGSVQNYVA 669 Query: 244 TFSDITEERQIRQLEGNILAA 264 F+DIT+ + + + Sbjct: 670 VFTDITQRKLSEERLQFLANH 690 Score = 52.7 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 48/285 (16%), Positives = 89/285 (31%), Gaps = 28/285 (9%) Query: 105 FALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRA 164 LS +R + Q + L+ A ++ V ++ IV N A Sbjct: 283 LVLSSTGVALSGLNAGRIRSEARLKEQLDTYDALLHAQADVNEGVAIIHR-GKIVYGNDA 341 Query: 165 FTEMFGYCISEA-SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIW 223 + GY + G +L++ + + I Q+L + E L L + G I Sbjct: 342 LWRIGGYSPGDIPLGSDFFSLIHPSDRKRVSEIYQQRLQDMDVPTRYEALGLGKNGRAIH 401 Query: 224 IKASISPVYDVLAHLQNLVMTFSDITEERQIR----QLEGNILAAMCSSPPFHEMG---- 275 I+ + + D Q +V DI+ ++ + + + + S Sbjct: 402 IEIAAAQYRDDS---QRIVTLIIDISSRKKAEAELVKSQQDYRELVESVQAIVWRAIPGG 458 Query: 276 --EIICRNIESVLNESHVSL-----FALRNGMP--IHWASSSHGAEIQNAQSWSATIR-- 324 + + E++L F + P W E QS+ R Sbjct: 459 KFTFVSKEAEALLGYPLAQWTTDPGFWVDKIHPDDRDWVVEYCRTESLKLQSFDFDYRMI 518 Query: 325 QRDGAPAG----ILQIKTSSGAETSAFIERVADISQHMAALALEQ 365 DG + I S + + + DI+ AA A + Sbjct: 519 AADGRVVWMKDIVKVIPNMSNTRPAELVGVMLDITASKAAEADLR 563 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 807 bits (2085), Expect = 0.0, Method: Composition-based stats. Identities = 208/815 (25%), Positives = 359/815 (44%), Gaps = 52/815 (6%) Query: 18 LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNR 77 + + ++ + N ++ NPA ++ GY E+V+G N +L + Sbjct: 336 FDSSAEAIIITDLNANIISVNPAFTQITGYSPEDVLGKNPRILSSGQQSKGFYRELWEAL 395 Query: 78 EGGKARVEGMSRELQLEKKDGSKIWTRFALS--KVSAEGKVYYLALVRDASVEMAQKEQT 135 EL K+GS ++S + +++ + D + + + Sbjct: 396 LRDNF----WQGELVNRHKNGSLYNIHLSISASRDGTGQLQHFIGVTTDITERKQHESEL 451 Query: 136 RQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFP 191 R ++ + + + +LDP+ +I++ + +F M GY +E GM + Sbjct: 452 RMESEKNMVLLRNASDGIHILDPDGNIIEASDSFCSMLGYQRNEMLGMNVCQ-WDADFSD 510 Query: 192 ADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEE 251 + R Q E + G I ++ S P+ + + DITE Sbjct: 511 PRIVKLFRDQFTNKGRTQFETRHRRKDGTVIDVEISGYPLQ-LHGKPALFNSS-RDITER 568 Query: 252 RQIRQLEGNILAAMC--SSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSH 309 ++I A + I R + + + S + P +S H Sbjct: 569 KKIEVEIQIAATAFEAQEGMLITDADRNILRVNRAFTDITGYSAEEVIGKNPRILSSGLH 628 Query: 310 GAEIQNA--------QSWSATI--RQRDGAPAG----ILQIKTSSGAETSAFIERVADIS 355 + A +W I ++++G I +K + G ++ ++DI+ Sbjct: 629 DSHFYAAMWNTLVATGAWKGEIWNKRKNGEVYPERLAITAVKDARGVVI-NYVASLSDIT 687 Query: 356 QHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV----DKAVSPVVYLIGV 411 H + + I L FDP+TGLPNR L + L + + + + + Sbjct: 688 LH--------KAAEDEIRSLAFFDPLTGLPNRRLLMDRLQQALVASSRSGKAGALLFLDL 739 Query: 412 DHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIA 471 D+ +++ D+LG+ D L +V R + ++ + RI G +FV++ + +I + Sbjct: 740 DNFKNLNDTLGHDIGDLLLQQVAQRLKNCVREGDTVARIGGDEFVVMLEDLSAESIEAAS 799 Query: 472 D------ELRNVVSKPIMIDDKPFPLTLSIGISYDLGKN--RDYLLSTAHNAMDYIRKNG 523 ++ + ++KP ++ T SIG + + D L A AM +K G Sbjct: 800 QTEAVGWKIISTLNKPYHLEKFEVHSTPSIGATLFDSRPQIIDDLFKQADIAMYQAKKAG 859 Query: 524 GNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHD 583 N +FF P M + + R L A L+++I + L YQ Q+ E G EAL RW Sbjct: 860 RNTMRFFDPQMQDTLNTRTALEADLRKSIERREFNLFYQIQVD-EMNRPVGAEALIRWIH 918 Query: 584 PLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNI-HIPALSVNLSALHFR 642 P G V P+ FIPLAEE I NIG WV+ EAC QL W++ + L+VN+SA FR Sbjct: 919 PKRGMVSPAEFIPLAEETDLILNIGLWVLQEACAQLKTWQNNPLTRNLVLAVNVSAKQFR 978 Query: 643 SNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTG 702 + QV + + ID +L +E+TESM+ E+ + + L+++GV S+DDFGTG Sbjct: 979 QSDFATQVRVFVEKYAIDPSKLKLELTESMLQENIEDTILIMNALKEIGVQFSLDDFGTG 1038 Query: 703 FSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQF 762 +S L + LP+ ++KID+SFV ++ A++ AI ++ +SL L V+AEGVET+EQ Sbjct: 1039 YSSLQYIKKLPLNQLKIDQSFVHDLDFDRDDKAIVRAIIAMAKSLQLDVIAEGVETQEQR 1098 Query: 763 EMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPL 797 ++L C QGY FS+PLP E + + L Sbjct: 1099 QLLLNKGCTHFQGYLFSKPLPIREFDALLERAIEL 1133 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 50/294 (17%), Positives = 99/294 (33%), Gaps = 34/294 (11%) Query: 100 KIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIV 159 I A+S ++ +Y L ++ + + R D +I+ D +I+ Sbjct: 297 VIPVLLAISLLAM---AFYRRLAQNEAQRREAERLQRINATVFDSSAEAIIITDLNANII 353 Query: 160 QCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTG 219 N AFT++ GY + G P +L+ + L + L + Q E + + G Sbjct: 354 SVNPAFTQITGYSPEDVLGKNP-RILSSGQQSKGFYRELWEALLRDNFWQGELVNRHKNG 412 Query: 220 EKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEG----NILAAMCSSPPFHEMG 275 I SIS D LQ+ + +DITE +Q + + ++ + Sbjct: 413 SLYNIHLSISASRDGTGQLQHFIGVTTDITERKQHESELRMESEKNMVLLRNASDGIHIL 472 Query: 276 EIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQ---------------SWS 320 + IE ++S S+ + + A+ + + + Sbjct: 473 DPDGNIIE--ASDSFCSMLGYQRNEMLGMNVCQWDADFSDPRIVKLFRDQFTNKGRTQFE 530 Query: 321 ATIRQRDGAPAGI-LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIE 373 R++DG + + A DI+ E++K I+ Sbjct: 531 TRHRRKDGTVIDVEISGYPLQLHGKPALFNSSRDIT--------ERKKIEVEIQ 576 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 807 bits (2085), Expect = 0.0, Method: Composition-based stats. Identities = 194/705 (27%), Positives = 336/705 (47%), Gaps = 56/705 (7%) Query: 128 EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI 187 ++ RQL AV+ + + + D +R I+ N A EM GY + E G + Sbjct: 185 RKRAEKHLRQLKQAVETMQLGITITDLDRKIIYMNPAGAEMHGYQVEELLGQDVSMFVPP 244 Query: 188 PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSD 247 R+++ WK E + + + G + V + +V + D Sbjct: 245 EHRKPLTLERIKE--WKGLI--RESVNIRKDGTTFLVWLMSEIVKNAKGEPFAIVTSCED 300 Query: 248 ITEERQ----IRQLEGNILAAMCSSPPFHEMGEIICR------NIESVLNESHVSLFALR 297 ITE +Q +R+ E + S+P + + + V + Sbjct: 301 ITERKQAEEALRKSEERYRIVLESAPDPVVVYDTEGKVAYFNPAFSRVFGWTLDESIGRN 360 Query: 298 -NGMPIH--------WASSSHGAEIQNAQSWSATIRQRDGAPAGIL---QIKTSSGAETS 345 + +P+ + + G + +++ T +DG G+ + + Sbjct: 361 IDFLPVENVPENKLIFEKINCGKTLSGIETYCLT---KDGKKVGVNISGAGFFDNHDKLQ 417 Query: 346 AFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP- 404 I + DI+ E++K+ + I+ L D +TGL NR + + L+D + ++ S Sbjct: 418 GSIITLQDIT--------ERKKTEEEIKFLAYHDVLTGLLNRKSFYTRLEDELIRSYSYD 469 Query: 405 -----------VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGT 453 ++ + VD + V D+LG+ D+ L V R + L+ Y+ R+ G Sbjct: 470 GDRRRIKGHKWALFFLDVDRFKYVNDTLGHDVGDELLKVVAVRLKNCLRKSDYIFRLGGD 529 Query: 454 QFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLS 510 +F ++ + D +++ ++A ++R +++P I D +T+SIGIS D G + + L+ Sbjct: 530 EFTIILNDLTDDTDMAKVAQKIRKAIARPCRIKDHELYITVSIGISIYPDDGDDVETLVK 589 Query: 511 TAHNAMDYIRKNGGN-GWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAET 569 A AM ++ N G++FF MN ER++L L+ A+ ++QL + YQP + T Sbjct: 590 NADIAMYAAKEE--NQGYRFFIEEMNRKTLERMMLENNLRNALQHDQLIIYYQPLVD-ST 646 Query: 570 GELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHI 629 ++ G+EAL RWH P G + PS+FIPLAEE G I IG+WV+ AC+Q +W Sbjct: 647 NQIVGMEALLRWHHPELGLISPSQFIPLAEETGLIVPIGKWVLRCACQQARKWHEMGYTR 706 Query: 630 PALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRD 689 ++VNLS FR L + + A + L +E+TES +MEH + ++++LR Sbjct: 707 FYVAVNLSVRQFREPDLVETIEQILEATDLPPDCLKLEVTESGIMEHPEQAIAKMKMLRA 766 Query: 690 MGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNL 749 G+ S+DDFGTG+S LS L P+ +KID+SFV T K +++ I ++ ++L + Sbjct: 767 KGIHFSIDDFGTGYSSLSYLKRFPIDTLKIDRSFVIDSTTNKDDQEIIKTIIAMARNLGM 826 Query: 750 TVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 VAEGVE KEQ + L C ++QGY+F RP+PAE+ + + Sbjct: 827 DTVAEGVEAKEQQDFLIHHGCHMMQGYYFGRPMPAEKFEDMLQTR 871 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 64/276 (23%), Positives = 128/276 (46%), Gaps = 24/276 (8%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR-PAHPEY 72 A+E +G + + + ++++ NPA ++ GY+ EE++G ++ M +P + R P E Sbjct: 195 LKQAVETMQLGITITDLDRKIIYMNPAGAEMHGYQVEELLGQDVSMFVPPEHRKPLTLER 254 Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSK--IWTRFALSKVSAEGKVYYLALVR-DASVEM 129 I+ + G+ RE +KDG+ +W + K +A+G+ + + D + Sbjct: 255 IKEWK--------GLIRESVNIRKDGTTFLVWLMSEIVK-NAKGEPFAIVTSCEDITERK 305 Query: 130 AQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 +E R + I ++ PV+V D E + N AF+ +FG+ + E+ G D L Sbjct: 306 QAEEALRKSEERYRIVLESAPDPVVVYDTEGKVAYFNPAFSRVFGWTLDESIGRNIDFL- 364 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 E +N++ +++ E LT+ G+K+ + S + +D LQ ++T Sbjct: 365 -PVENVPENKLIFEKINCGKTLSGIETYCLTKDGKKVGVNISGAGFFDNHDKLQGSIITL 423 Query: 246 SDITEERQIRQLE-----GNILAAMCSSPPFHEMGE 276 DITE ++ + ++L + + F+ E Sbjct: 424 QDITERKKTEEEIKFLAYHDVLTGLLNRKSFYTRLE 459 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 807 bits (2085), Expect = 0.0, Method: Composition-based stats. Identities = 231/809 (28%), Positives = 350/809 (43%), Gaps = 43/809 (5%) Query: 16 PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNN-IDMLIPRDLRPAHPEYIR 74 LE V+++ + FN A E L Y EV G D + P + R E Sbjct: 410 AILEHAGALVVVLDREGRIRRFNRACEALTQYSFSEVEGRQVWDFIPPEERRIVQDEAFA 469 Query: 75 HNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKV-YYLALVRDASV----E 128 + ++ +DG + ++ S + A+GKV + +A+ D + E Sbjct: 470 VLFNDPEQSRSTLTN--HWVARDGGRRLIEWSNSVLHDAQGKVEFVVAVGNDVTDKMRAE 527 Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI- 187 A KE +L A LD + + +F A G + L+ Sbjct: 528 AALKESESRLKEAQRIAQVGSWALDLVTGKLIWSDEMFRIFE-TDEAAFGQSYEAFLDAL 586 Query: 188 -PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 PE + LL G W+ Y T Sbjct: 587 HPEDREHVNKAYMHSVTNHTPYDLVHRLLLPDGRVKWLHGRGETRYGKNGDPIASCGTVQ 646 Query: 247 DITEERQIRQLE---GNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIH 303 DIT ++ +I + + I + N + +L +R P Sbjct: 647 DITARKKQEDALRLYASIFEHSGEAILIADQARHIIAVNPAFTNLTGYALDDIRGEEPTI 706 Query: 304 WASS--------SHGAEIQNAQSWSATI--RQRDGAPAG---ILQIKTSSGAETSAFIER 350 A S A ++ W I R++DG + + + + ++ Sbjct: 707 LAGGQASEESYRSTWASLEQTGYWQGEIIDRRKDGTLYPKWMAVSVVRDADGVLTHYVAS 766 Query: 351 VADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVV 406 DI+ E++ + I+ L DP+TGL NR +L LD + A V Sbjct: 767 FTDIT--------ERKLAEAQIKHLAYHDPLTGLSNRFSLQTQLDQTLALARREQRTLAV 818 Query: 407 YLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVS 465 + +D + + DSLG+A DQ L+EV R R+ ++ + R+ G +FV+V E D + Sbjct: 819 VFLDLDRFKSINDSLGHALGDQLLVEVARRLRDNVRDSDIVARLGGDEFVVVLTEVGDAA 878 Query: 466 NITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNG 523 ++AD+L + I T SIGIS G + D L+ A AM + + G Sbjct: 879 GAARVADKLLGALVPRYRIGGHALHTTASIGISLYPHDGDDADALMKNADTAMYHAKSQG 938 Query: 524 GNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHD 583 + QFF+P MN+ V +RL L+ A+ Q +L YQPQI + +G + +EAL RW Sbjct: 939 RDNVQFFTPEMNQSVLKRLQFDHDLRVAVEAGQFELHYQPQINSTSGRVVKVEALVRWQH 998 Query: 584 PLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRS 643 P G V P+ FIP+AEE G I +G WV+ EACRQL WR I ++VNLSA S Sbjct: 999 PREGLVSPAEFIPIAEETGLILPLGEWVLNEACRQLRLWRDAGITDLTVAVNLSAHQLHS 1058 Query: 644 NQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGF 703 L V+ + G++G L +EITES+ M T ++Q LRD+G+ LS+DDFGTG+ Sbjct: 1059 PALIPMVARTLGNHGLEGADLCLEITESVAMRDTTASIAQLQALRDLGIHLSIDDFGTGY 1118 Query: 704 SGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFE 763 S LS L LP+ +K+D+SFV +A+ A ++ SL L VVAEG+ET+ Q Sbjct: 1119 SSLSYLKLLPIDTLKLDQSFVCEIEFNPSDVAICAATIALAHSLGLEVVAEGIETETQRR 1178 Query: 764 MLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 +L C +QGY FS PLPAE ++ Sbjct: 1179 LLASHRCDFMQGYLFSAPLPAERALAYIR 1207 Score = 70.8 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 39/261 (14%), Positives = 83/261 (31%), Gaps = 24/261 (9%) Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 +E + ++H V+VLD E I + NRA + Y SE G Q + Sbjct: 399 RELRELSALQGAILEHAGALVVVLDREGRIRRFNRACEALTQYSFSEVEGRQVWDFIPPE 458 Query: 189 EFPADNRIRLQQLLWKTARDQDEFL--LLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 E L + + + R G + I+ S S ++D ++ +V + Sbjct: 459 ERRIVQDEAFAVLFNDPEQSRSTLTNHWVARDGGRRLIEWSNSVLHDAQGKVEFVVAVGN 518 Query: 247 DITEERQIRQLEGNILAAMCSSPPFHEMGE-----------------IICRNIESVLNES 289 D+T++ + + + + ++G I E+ +S Sbjct: 519 DVTDKMRAEAALKESESRLKEAQRIAQVGSWALDLVTGKLIWSDEMFRIFETDEAAFGQS 578 Query: 290 HVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIR--QRDGAPAGIL---QIKTSSGAET 344 + + + + ++ + N + R DG + + + + Sbjct: 579 YEAFLDALHPEDREHVNKAYMHSVTNHTPYDLVHRLLLPDGRVKWLHGRGETRYGKNGDP 638 Query: 345 SAFIERVADISQHMAALALEQ 365 A V DI+ + Sbjct: 639 IASCGTVQDITARKKQEDALR 659 Score = 62.0 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 47/129 (36%), Gaps = 6/129 (4%) Query: 13 IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEY 72 ++ E + ++ ++ ++ NPA L GY +++ G +L E Sbjct: 660 LYASIFEHSGEAILIADQARHIIAVNPAFTNLTGYALDDIRGEEPTILA----GGQASEE 715 Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYLALVRDASVEMA 130 + + E+ +KDG+ W ++ + + +Y+A D + Sbjct: 716 SYRSTWASLEQTGYWQGEIIDRRKDGTLYPKWMAVSVVRDADGVLTHYVASFTDITERKL 775 Query: 131 QKEQTRQLI 139 + Q + L Sbjct: 776 AEAQIKHLA 784 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 806 bits (2084), Expect = 0.0, Method: Composition-based stats. Identities = 212/892 (23%), Positives = 364/892 (40%), Gaps = 126/892 (14%) Query: 16 PALEQNMMGAVLINE----NDEVMFFNPAAEKLWGYKREEVIGNNI-DMLIPRDLRPAHP 70 L+ + + +N + V+ N A + + + EEV+G + D H Sbjct: 62 QGLKDYIDNLITLNAKLSTDGTVLLINETALRTFHMQPEEVVGKKLWDTPWWSYDADLHT 121 Query: 71 EYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYYLALVRDASVE 128 + ++ + + E G KI+ F L+ V +Y +A RD + Sbjct: 122 QLKNAVKQAATGQ--TIYYETINHLVSGKKIYIYFTLNPVLNKNNEVIYLVAEGRDITKR 179 Query: 129 MAQKE--------------------------------QTRQLIIAVDHLDRPVIVLDPER 156 ++ +L ++ + ++ + Sbjct: 180 KMIEQDLISTNQELVAANEELISIEEELRISNKEIYLAHERLNNILESITDAFYAVNHQW 239 Query: 157 HIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLT 216 + N ++ + G + L Q++ + Q E+ Sbjct: 240 EVTYVNTEAEKLLHKKRLDIIGKNIWQEFS-EMVHTKFYHILHQVMSEQIYQQFEYFF-Q 297 Query: 217 RTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER----------QIRQLEGNILAAMC 266 TG+ W P D L + F DITE + Q A+ Sbjct: 298 PTGK--WFNIHAYPSSD------GLSIYFHDITEYKLVQEKMSLQNQYLSSLHETTLALM 349 Query: 267 SSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWA--------SSSHGAEIQNAQS 318 + E+ + I + H +F + N P G ++ + Sbjct: 350 NRLNLDELLKAIVTRSAELSGTDHGFIFLIDNNNPSELVLRFGTGTYKQMVGIRLKPGEG 409 Query: 319 WSATI----------------------------------RQRDGAPAGILQIKTSSGAE- 343 T+ + +G GIL I + Sbjct: 410 MVGTVWQTGEPLIVKDYSSWPGKSSIFSHIKIHGGIALPLKSEGKINGILGIIYIEKNQN 469 Query: 344 --------TSAFIERVA------DISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNN 389 + F + + ++ Q E+++ + + L D +T LPNR Sbjct: 470 LESNNLSLLTGFAQLASIALDNANLYQAAQQELAERKRIEEILRYLAYHDSLTELPNRTL 529 Query: 390 LHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQ 445 ++ L +++A V + +DH + V D+LG+ DQ L + RF + L+ Sbjct: 530 FNDRLSMALNQAHRNKNKLAVMFLDLDHFKKVNDTLGHDIGDQLLKGIAQRFSKLLRKGD 589 Query: 446 YLCRIEGTQFVLVS-LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLG 502 + RI G +F ++ N + +AD++ + ++ P +I + F +T SIGI+ D G Sbjct: 590 TIARIGGDEFTILLHNITRAENASIVADKIIDTLANPWIIGNHEFHITTSIGIALYPDDG 649 Query: 503 KNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQ 562 + + LL A AM ++ G N +QF++P MN R L L+ A+ + + YQ Sbjct: 650 TDAESLLKNADAAMYQAKEMGRNNYQFYTPTMNAQTLRRFELENNLRRALDRKEFVIYYQ 709 Query: 563 PQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEW 622 PQ+ TG++ G+EAL RW P G + P+ FIP+AEE G I IG W++ AC Q W Sbjct: 710 PQVEIHTGKIVGVEALIRWQHPQRGMISPAEFIPMAEETGLIIPIGEWILRRACAQNKAW 769 Query: 623 RSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFK 682 + + ++VNLSA F LP +S+ + G+ L +EITES+ M+ K Sbjct: 770 QDRGFSPMRVTVNLSARQFLQPHLPQYISNVLEDTGLGPQWLELEITESLAMKDVAFTEK 829 Query: 683 RIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITS 742 + LR MG+ L++DDFGTG+S L+ L LP+ +KID+SF+ TE +A++ AI + Sbjct: 830 TLIELRKMGITLAIDDFGTGYSSLNYLKRLPIDILKIDRSFIHDLNTESDDVAIISAIIT 889 Query: 743 IGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPG-WMSS 793 +G +L + VVAEGVETKEQ LR+ C ++QGY F++PLP E+ ++S+ Sbjct: 890 LGHNLKMKVVAEGVETKEQLMFLRQQQCDLMQGYLFTKPLPVRELEQKYLSN 941 Score = 51.2 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 74/196 (37%), Gaps = 4/196 (2%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 + + S K++ + L +D+L L + ++ N F E G + Sbjct: 47 ITTEVSSLENLKQEEQGLKDYIDNLITLNAKLSTDGTVLLINETALRTFHMQPEEVVGKK 106 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQD---EFLLLTRTGEKIWIKASISPVYDVLAH 237 + AD +L+ + + A Q E + +G+KI+I +++PV + Sbjct: 107 LWD-TPWWSYDADLHTQLKNAVKQAATGQTIYYETINHLVSGKKIYIYFTLNPVLNKNNE 165 Query: 238 LQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALR 297 + LV DIT+ + I Q + + ++ E R + +H L + Sbjct: 166 VIYLVAEGRDITKRKMIEQDLISTNQELVAANEELISIEEELRISNKEIYLAHERLNNIL 225 Query: 298 NGMPIHWASSSHGAEI 313 + + + +H E+ Sbjct: 226 ESITDAFYAVNHQWEV 241 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 806 bits (2083), Expect = 0.0, Method: Composition-based stats. Identities = 183/687 (26%), Positives = 306/687 (44%), Gaps = 33/687 (4%) Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 +E + + D + ++ + ++ NR EM G+ E L Sbjct: 153 RELRESEEKFRVTFDQAPVGIAHVNADGRLLLINRRLCEMLGFQERELIESSFPDLCVPE 212 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 R + + E L+ + G IW K ++SP+ D + + DI Sbjct: 213 NRDVHERELKKSVEQGLEYHGFEIPLVHKDGRIIWTKLTLSPMKDAAGVPKYFIHIVEDI 272 Query: 249 TEERQIRQL---EGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWA 305 TE + + + + I R + + + + P Sbjct: 273 TERKNFEDNLRLSATVFEGSTEAIIITDARANILRVNSAFTAMTGYADHEVVGKNPRLLK 332 Query: 306 SSSH--------GAEIQNAQSWSATI--RQRDG----APAGILQIKTSSGAETSAFIERV 351 S +H A + + W I R+++G A + ++ S + + ++ Sbjct: 333 SGNHHEEFYRAMWATLSSTGQWQGEIWNRRKNGDIFPAWLTLCAVRNSE-DKITNYVGIS 391 Query: 352 ADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVY 407 DI+ ++++ + + D +TGLPNR H+ L + +A + Sbjct: 392 RDITL--------RKEAEERLSYQASHDALTGLPNRARFHDRLTHALARAGRDRHEFAIL 443 Query: 408 LIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL-ENDVSN 466 + +D + + D+LG+ D L V R + L R G +F+++ + Sbjct: 444 FLDLDRFKVINDTLGHTVGDFLLQGVTKRLLGGTRESDTLARWGGDEFIILLESIRGAED 503 Query: 467 ITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGG 524 A + +V+++P + ++ SIGIS G++ LL A AM + +G Sbjct: 504 AAVAARRILDVLAEPFSVQGHEVFVSGSIGISVYPRDGEDVQALLRCADIAMYRAKDSGK 563 Query: 525 NGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDP 584 N +QF+ M+ ERL L L+ A+ N+ L YQP++ TG + G EAL RW P Sbjct: 564 NDYQFYESTMSTGGLERLKLEGDLRYALKRNEFVLHYQPRVNINTGLIVGAEALIRWDLP 623 Query: 585 LHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSN 644 G + P FIPLAEE G I IG WV+ AC Q +W+ + P +SVNLS F+ + Sbjct: 624 DRGLLWPLDFIPLAEESGFIIPIGEWVLRTACLQCRKWQDAGVPHPRVSVNLSTHQFKKD 683 Query: 645 QLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFS 704 L + V + G+ L +EITES MME+ + +Q L ++GV +++DDFGTG+S Sbjct: 684 NLTSTVDRILKETGLSPGLLELEITESAMMENLEKAVATLQGLAELGVNVAIDDFGTGYS 743 Query: 705 GLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEM 764 L L P+ +KID+SFV + A+ +I S+G++LNL VVAEGVET+EQ + Sbjct: 744 SLGYLKRFPIGALKIDQSFVRHIPSNIDDTAIAMSIISLGKTLNLKVVAEGVETQEQLTV 803 Query: 765 LRKIHCRVIQGYFFSRPLPAEEIPGWM 791 LR C QGY FS+P+ A+ + ++ Sbjct: 804 LRNYQCDEAQGYLFSQPVDADRMTEFL 830 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 59/277 (21%), Positives = 110/277 (39%), Gaps = 11/277 (3%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 T ++ F +Q +G +N + ++ N ++ G++ E+I ++ L Sbjct: 152 TRELRESEEKFRVTFDQAPVGIAHVNADGRLLLINRRLCEMLGFQERELIESSFPDLCVP 211 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLAL 121 + R H ++ + E G +E E+ L KDG IWT+ LS + V Y++ + Sbjct: 212 ENRDVHERELKKSVEQG---LEYHGFEIPLVHKDGRIIWTKLTLSPMKDAAGVPKYFIHI 268 Query: 122 VRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 V D + ++ R + +I+ D +I++ N AFT M GY E G P Sbjct: 269 VEDITERKNFEDNLRLSATVFEGSTEAIIITDARANILRVNSAFTAMTGYADHEVVGKNP 328 Query: 182 DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNL 241 L + R + L T + Q E + G+ ++ V + + N Sbjct: 329 RLLKSGNHHEEFYRA-MWATLSSTGQWQGEIWNRRKNGDIFPAWLTLCAVRNSEDKITNY 387 Query: 242 VMTFSDITEERQIRQL-----EGNILAAMCSSPPFHE 273 V DIT ++ + + L + + FH+ Sbjct: 388 VGISRDITLRKEAEERLSYQASHDALTGLPNRARFHD 424 >UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=C6D7W4_PAESJ Length = 1095 Score = 806 bits (2082), Expect = 0.0, Method: Composition-based stats. Identities = 212/819 (25%), Positives = 371/819 (45%), Gaps = 50/819 (6%) Query: 11 DGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHP 70 + + L+ A +I+ ++ N AA KL GY ++E + + + P DL A Sbjct: 140 EQRYITLLKNMFSAAFIIDLQGNILDVNDAAVKLTGYNKQEHVHFS-QFINPEDLEQAMA 198 Query: 71 EYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV-YYLALVRDASVEM 129 Y + EG E +S ++ + K+G + LS + ++ + + D S E Sbjct: 199 -YNQRALEG-----ETLSFQISILHKNGHNVDVMTTLSPIYMHDQITGIIGISNDISDET 252 Query: 130 AQKE----QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 K+ ++ + + D + + CN A + GY E L+ Sbjct: 253 RNKQLFQINKQRYESLFEQNPDAISYFDLNGNFMDCNSALENILGYSREELLYSNYSHLV 312 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 E R Q L T + E + L + G +++K + P+ V + + Sbjct: 313 AEYERDR-ARFYFDQALQGTVQS-YELVCLHKQGHLVYMKLTKLPIT-VDNRIVGIYSIA 369 Query: 246 SDITEERQIRQLEGNILAAMCSSPPFHEMG-EIICRNIESVLNESHVSLFALRNG----- 299 DIT ++Q + S +G II +NI N + + + Sbjct: 370 KDITTKKQAENALIEAESKYRSLVEKSIVGVYIIQKNIILYANPYLIDMLGYKEAIIGMS 429 Query: 300 -----MPIHWASSSHGAEI--QNAQSWSATIR--QRDGAPAGILQIKTSSGAETS-AFIE 349 P ++ +I + +R +G + + S A I Sbjct: 430 IWDIVYPDDYSVVKQNIQILYNETDAIRHPLRVLTAEGKLLDVEMYSNRIMYQGSPAVIG 489 Query: 350 RVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA----VSPV 405 + D++ E++++ + L D +T LPNR L++ ++ A Sbjct: 490 TILDVT--------ERKRAEELNAFLAYHDSLTELPNRRKFEEMLENALETAKTARRHFA 541 Query: 406 VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLENDV 464 V + +D + + DSLG+A DQ L+ R +E+++ + R+ G +F V++ D Sbjct: 542 VMYLDMDRFKYINDSLGHAVGDQLLIAFSKRLQEQIRETDFAARMGGDEFTVILPHIRDN 601 Query: 465 SNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKN 522 ++ ++A + +P I+D +T SIGIS + G + L+ A +A+ + Sbjct: 602 NSAIEVARRIIERTREPFYIEDYELFITTSIGISIYPNDGDDSSTLMKNADSALFRAKDL 661 Query: 523 GGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWH 582 G NG+Q F+ +MN + L L++AI ++L++ YQP++ TGE+ G EAL RW+ Sbjct: 662 GKNGYQIFTSSMNVQTYKVFTLEKDLRKAIQRDELEMYYQPKVNIHTGEIVGAEALIRWN 721 Query: 583 DPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFR 642 P G V P+ FIP++EE G I ++G WV CRQ EW+ + +S+N++A F Sbjct: 722 HPEWGLVSPNEFIPISEETGLILSLGNWVKRTVCRQNKEWQLAGLKPIPISINVTAKRFL 781 Query: 643 SNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTG 702 S + + + G++ H L +EITES ++E+ + + L +GV +S+DDFGTG Sbjct: 782 SKDFMDAIQQILAETGLEPHYLEIEITESSLLENAETVMHTLDSLNKLGVTISLDDFGTG 841 Query: 703 FSGLSRLVSLP--VTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKE 760 +S LS L + +KID+SF+ A++ AI + Q +N++VVAEGVET E Sbjct: 842 YSSLSYLKRFKHTINILKIDRSFIHDLHQGSDDNAIISAIIQLAQHMNMSVVAEGVETGE 901 Query: 761 QFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS--SVLPL 797 Q +L+ + C ++QGY FSRP+ AE + S+ PL Sbjct: 902 QLHILKLLKCDLVQGYLFSRPVQAEAFAQLLKRGSLTPL 940 Score = 99.3 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 51/365 (13%), Positives = 120/365 (32%), Gaps = 34/365 (9%) Query: 17 ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHN 76 + +L + N ++ N A GY EE L+P + R E+ + Sbjct: 29 MFDFRSDIFLLFDHNGRLIEANQAFTDTLGYSLEEFKHLTYGSLLPGNQRQRAKEHFQKL 88 Query: 77 REGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV-YYLALVRDASVEMAQKEQT 135 G E+++ K G I + + A+ +D S +++ Sbjct: 89 LHGEIQIF-----EIRVLHKTGQFIDLTVTAFPRKLNDAIDGFYAIAKDLSDIKLMEQR- 142 Query: 136 RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNR 195 I + ++ ++D + +I+ N A ++ GY E +N + + Sbjct: 143 --YITLLKNMFSAAFIIDLQGNILDVNDAAVKLTGYNKQEHV--HFSQFINPEDL--EQA 196 Query: 196 IRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQ-- 253 + Q + + +L + G + + ++SP+Y + + ++ +DI++E + Sbjct: 197 MAYNQRALEGETLSFQISILHKNGHNVDVMTTLSPIY-MHDQITGIIGISNDISDETRNK 255 Query: 254 --IRQLEGNILAAMCSSPPFHEMGEIIC------RNIESVLNESHVSLFALRNGMPIHWA 305 + + + +P ++ +E++L S L N + Sbjct: 256 QLFQINKQRYESLFEQNPDAISYFDLNGNFMDCNSALENILGYSREELL-YSNYSHLVAE 314 Query: 306 SSSHGAEIQNAQSWSATIR-------QRDGAPAG--ILQIKTSSGAETSAFIERVADISQ 356 A Q+ T++ + G + ++ + DI+ Sbjct: 315 YERDRARFYFDQALQGTVQSYELVCLHKQGHLVYMKLTKLPITVDNRIVGIYSIAKDITT 374 Query: 357 HMAAL 361 A Sbjct: 375 KKQAE 379 Score = 95.9 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 51/277 (18%), Positives = 104/277 (37%), Gaps = 20/277 (7%) Query: 10 ADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAH 69 + EQN + N M N A E + GY REE++ +N L+ R Sbjct: 261 NKQRYESLFEQNPDAISYFDLNGNFMDCNSALENILGYSREELLYSNYSHLVAEYERDRA 320 Query: 70 PEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL-ALVRDASVE 128 Y +G S EL K G ++ + ++ + ++ + ++ +D + + Sbjct: 321 RFYFDQALQGTVQ-----SYELVCLHKQGHLVYMKLTKLPITVDNRIVGIYSIAKDITTK 375 Query: 129 MAQK----EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 + E + V+ V ++ + I+ N +M GY EA Sbjct: 376 KQAENALIEAESKYRSLVEKSIVGVYII-QKNIILYANPYLIDMLGY--KEAIIGMSIWD 432 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 + P+ + + +Q L +T + +LT G+ + ++ + + ++ T Sbjct: 433 IVYPDDYSVVKQNIQILYNETDAIRHPLRVLTAEGKLLDVEMYSNRIM--YQGSPAVIGT 490 Query: 245 FSDITEERQIRQLE-----GNILAAMCSSPPFHEMGE 276 D+TE ++ +L + L + + F EM E Sbjct: 491 ILDVTERKRAEELNAFLAYHDSLTELPNRRKFEEMLE 527 Score = 68.1 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 39/261 (14%), Positives = 94/261 (36%), Gaps = 29/261 (11%) Query: 140 IAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQ 199 D ++ D +++ N+AFT+ GY + E + +LL + Sbjct: 28 TMFDFRSDIFLLFDHNGRLIEANQAFTDTLGYSLEEFKHLTYGSLLPGNQR--QRAKEHF 85 Query: 200 QLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEG 259 Q L E +L +TG+ I + + P + + D+++ + + Q Sbjct: 86 QKLLHGEIQIFEIRVLHKTGQFIDLTVTAFP-RKLNDAIDGFYAIAKDLSDIKLMEQRYI 144 Query: 260 NILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSW 319 +L M S+ ++ I +N++ V L +H++ + +++ A ++ Sbjct: 145 TLLKNMFSAAFIIDLQGNILD-----VNDAAVKLTGYNKQEHVHFSQFINPEDLEQAMAY 199 Query: 320 ------------SATIRQRDGAPAGILQIKTSSG--AETSAFIERVADI---SQHMAALA 362 +I ++G ++ + + + I DI +++ Sbjct: 200 NQRALEGETLSFQISILHKNGHNVDVMTTLSPIYMHDQITGIIGISNDISDETRNKQLFQ 259 Query: 363 LEQEKSRQHIEQ----LIQFD 379 + +++ EQ + FD Sbjct: 260 INKQRYESLFEQNPDAISYFD 280 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 804 bits (2077), Expect = 0.0, Method: Composition-based stats. Identities = 206/825 (24%), Positives = 350/825 (42%), Gaps = 60/825 (7%) Query: 6 ADNAADGIFFPALEQNMMGAV---LINEND-----EVMFFNPAAEKLWGYKREEVIGNNI 57 A A + + + + G +I + E + NPA K G K +V+G + Sbjct: 538 ALRAKEATYRSLFDNMLNGVAHYRMIFRDGAPVDYEFIAVNPAFGKTTGLK--DVVGRKV 595 Query: 58 DMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVY 117 +IP + L K W F+ + + Sbjct: 596 SEVIPGYCEANQDSLQVFGKVAQTGEACHWEHYLSALGK-----WFSFS---IYSPAPGE 647 Query: 118 YLALVRDASVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERH-IVQCNRAFTEMFGYC 172 ++ + D + + R + ++ +++ D + N A M GY Sbjct: 648 FVVVSEDITERKQAETALRDSEDRFRSIFNNAIDGILLADSGTRKFIMGNSAIARMLGYS 707 Query: 173 ISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVY 232 E + + + + + + ++ + ++ + G + SP+ Sbjct: 708 NEELLQLGTEDI-HPEQDKEYYIAQFAMMVRGESTLSSNAVVKRKDGSVFYADIKASPLR 766 Query: 233 DVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI---ICRNIESVLNES 289 + L+ F DITE +Q A SS + ++ I ++ + S Sbjct: 767 --IGDKVYLMGFFRDITERKQTEDALRQGAAVFESSHNGIIITDLDGHILAANQAYADIS 824 Query: 290 HVSLFALRNGMPIHWASSS--------HGAEIQNAQSWSATI--RQRDGA----PAGILQ 335 + L P S A I+ A SW + R+++G + Sbjct: 825 GYTESELLGQNPRILNSGRQSRDFYRKMWANIKEAGSWQGELWNRRKNGEIYPTWLAVSA 884 Query: 336 IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLD 395 ++ G + ++ +D+SQ ++ E L +DP+T LPNR L ++L Sbjct: 885 VRNDQGK-ATHYVGISSDLSQ--------LRQTEAEREHLAHYDPLTDLPNRLLLRSHLT 935 Query: 396 DLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIE 451 + +A V + +D +++ DSLGY D+ L+ + R ++ + L R+ Sbjct: 936 HALAQAKRHHNQVGVLYLDLDRFKNINDSLGYQVGDELLVTLTERLTMHMRSEDLLARLG 995 Query: 452 GTQFVLVSL-ENDVSNITQIADELRNVVSKPIMIDD-KPFPLTLSIGISYD--LGKNRDY 507 G +F+LV N+ + +A L +++P ++ + + SIGIS G + + Sbjct: 996 GDEFLLVLEHINEPEDSAIVARSLLETLAQPFVLHGEREIFIGASIGISIFPNDGDSAEQ 1055 Query: 508 LLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFA 567 L+ A AM + G N + F++ ++ E L L L+ AI+ NQL++ YQPQ+ Sbjct: 1056 LIQHADAAMHQAKTLGRNTYHFYTEDLSRASNEHLELENRLRHAITANQLRVYYQPQVDI 1115 Query: 568 ETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNI 627 TG + G EAL RW DP G V P +FIPLAEE G I IG WV+ E C Q W + Sbjct: 1116 ATGHIIGAEALVRWQDPERGLVQPGQFIPLAEETGLIGAIGEWVLKETCLQGMRWIDAGL 1175 Query: 628 HIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQIL 687 L+VNLS F + +S + G +L +E+TES +M+ ++ K + +L Sbjct: 1176 PFLTLAVNLSPHQFLRGNIAGLISKVLAETGFPADRLELELTESALMQQGEDVIKMLHLL 1235 Query: 688 RDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSL 747 R + L++DDFGTG+S LS L P+ +KIDKSFVD + + + I ++G L Sbjct: 1236 RAQDIRLAIDDFGTGYSSLSYLKRFPLDILKIDKSFVDDIPFHQDDMEIAATIIAMGHIL 1295 Query: 748 NLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 V+AEGVET+EQ E L+ C + QGY S P+PAEE + Sbjct: 1296 GFKVLAEGVETREQLEFLQARGCDLYQGYLTSPPIPAEEFEKLLK 1340 Score = 88.9 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 68/411 (16%), Positives = 134/411 (32%), Gaps = 60/411 (14%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINE-NDEVMFFNPAAEKLWGYKREEVIGNNIDM 59 M+L + + D + +G + + ++ N + GY R++++ Sbjct: 405 MELANRSSEQDKQLKLFYDLPFIGMAITSPATKRWVYANDRLCDMLGYSRDDLLKTAWID 464 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKV-Y 117 L D ++ +G + E + +KDGS I + A+GK Sbjct: 465 LTHPDDV---AGNLKEFERMVAGETDGFNIEKRFIRKDGSPITVNLDVKCTRRADGKPDL 521 Query: 118 YLALVRDASVEMAQKEQTR----QLIIAVDHLDRPV-----IVLDP---ERHIVQCNRAF 165 +ALV D + + R D++ V I D + + N AF Sbjct: 522 IVALVDDITQRKQTELALRAKEATYRSLFDNMLNGVAHYRMIFRDGAPVDYEFIAVNPAF 581 Query: 166 TEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIK 225 + G + + G + ++ + +++ + +T L+ G+ W Sbjct: 582 GKTTG--LKDVVGRKVSEVIPGYCEANQDSLQVFGKVAQTGEACHWEHYLSALGK--WFS 637 Query: 226 ASI-SPVYDVLAHLQNLVMTFSDITEERQ----IRQLEGNILAAMCSSPPFHEMGEIICR 280 SI SP V+ DITE +Q +R E + ++ + + R Sbjct: 638 FSIYSPAPGE------FVVVSEDITERKQAETALRDSEDRFRSIFNNAIDGILLADSGTR 691 Query: 281 NIE-------SVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSAT--------IRQ 325 +L S+ L L IH Q A +++ Sbjct: 692 KFIMGNSAIARMLGYSNEELLQL-GTEDIHPEQDKEYYIAQFAMMVRGESTLSSNAVVKR 750 Query: 326 RDGAP--AGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQ 374 +DG+ A I G + + DI+ E++++ + Q Sbjct: 751 KDGSVFYADIKASPLRIGDKV-YLMGFFRDIT--------ERKQTEDALRQ 792 Score = 63.9 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 76/278 (27%), Gaps = 39/278 (14%) Query: 122 VRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPER-HIVQCNRAFTEMFGYCISEASGMQ 180 + + EQ +QL + D + + P V N +M GY + Sbjct: 402 LHRMELANRSSEQDKQLKLFYDLPFIGMAITSPATKRWVYANDRLCDMLGYSRDDLLKTA 461 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 L + + + + + + +T E + + G I + + Sbjct: 462 WIDLTHPDDVAGNLKEFERMVAGETDGFNIEKRFIRKDGSPITVNLDVKCTRRADGKPDL 521 Query: 241 LVMTFSDITEERQ-----------IRQLEGNILAAMCSSPPFHEMGEIICRNIESVLN-- 287 +V DIT+ +Q R L N+L + G + +V Sbjct: 522 IVALVDDITQRKQTELALRAKEATYRSLFDNMLNGVAHYRMIFRDGAPVDYEFIAVNPAF 581 Query: 288 ------------ESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQ 335 + + A+ A W + G Sbjct: 582 GKTTGLKDVVGRKVSEVIPGYCEANQDSLQVFGKVAQTGEACHWEHYL-SALGKWFS-FS 639 Query: 336 IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIE 373 I + + E F+ DI+ E++++ + Sbjct: 640 IYSPAPGE---FVVVSEDIT--------ERKQAETALR 666 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 803 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 215/844 (25%), Positives = 369/844 (43%), Gaps = 71/844 (8%) Query: 1 MKLTDADNAADG-------IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKRE--- 50 M DA G + G + +E + +N + E Sbjct: 1 MTSADASALPSGDIGRQLAYLQAVVSNMPQGISVFDEQLRLRVWNQGFINVLNLPPEIVY 60 Query: 51 EVIGNNIDMLIPR---DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFAL 107 E + + + +P + P PE + E S E + +G+ + Sbjct: 61 EGVHFSELVRVPAQRGEYGPGEPEAHVERITALANKFEAHSFE--RTRPNGNTHLVQGEP 118 Query: 108 SKVSAEGKVYYLALVRDASVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNR 163 + + V ++ D + A + R QL ++ + V + D ++V N Sbjct: 119 LFID-QQLVGFITTYTDITDRKAAETALRTQHNQLQTVIESIPSAVSLFDSAGNLVLFNT 177 Query: 164 AFTEMFGYCISEAS-GMQPDTLLNIPEF-----PADNRIRLQQLLWKTARDQDEFLLLTR 217 AF + A G+ +TL P D + L+ + + TR Sbjct: 178 AFPRLLDVPAELAKPGVSMETLFRFNAMRGEYGPGDPEKIVATLMERAKNPSHHYFERTR 237 Query: 218 TGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER---QIRQLEGNILAAMCSSPPFHEM 274 K ++ P+ + V ++DI+E R + QL + + + F + Sbjct: 238 PNGK-TLEVRGVPLAEG-----GFVTVYTDISERRASAEREQLAQKVYSHTPAGIIFTDD 291 Query: 275 G-----------EIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATI 323 E+ ++ ++ L +L G+ + +I SWS+ + Sbjct: 292 QHRILSINPATTEMTGYEPFELIGQTVFGLISLDEGI----SQKDFQEQISMRGSWSSEL 347 Query: 324 R--QRDGAPAG----ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQ 377 Q++G+ I ++ + ++ +ADI+ E++++ + + Q Sbjct: 348 EVTQKNGSNFPAGARINRVDDPQSGLPAHYVWILADIT--------ERKQAEDRMRHIAQ 399 Query: 378 FDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEV 433 D +TGLPNR L L L+ +A V I +D + + D+LG+ D+ L EV Sbjct: 400 HDALTGLPNRLALLMRLAQLLPEARRHGWTVAVMFIDLDRFKIINDTLGHQVGDEMLREV 459 Query: 434 VNRFREKLKPDQYLCRIEGTQFVLVSL-ENDVSNITQIADELRNVVSKPIMIDDKPFPLT 492 R L+ ++ R+ G +FV++ + ++ ++ ++ + +S I + + Sbjct: 460 ACRLSNLLRETDFVARLGGDEFVIILPSISSPADAAIVSGKIISALSTAIEAEGHELHTS 519 Query: 493 LSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKE 550 SIGIS D G + D +L A AM + + G N +QFF+ MN ERL + L+ Sbjct: 520 PSIGISIFPDDGPDGDIVLKNADTAMYHAKAAGRNNYQFFAADMNRTAAERLNIERKLRH 579 Query: 551 AISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRW 610 AI+ N+L LV+QPQ AE G+EAL RWH P G + P+RFIP+AEE G I IG W Sbjct: 580 AIARNELSLVFQPQFRAEDTTPTGVEALLRWHHPTDGMISPARFIPVAEETGMIVEIGDW 639 Query: 611 VIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITE 670 V+A AC ++A W + + ++VN+SA R V++A+ G+ L +EITE Sbjct: 640 VLATACHEMARWINAGLKPLRIAVNVSARQLRRRDFCETVANALTTSGLPAELLELEITE 699 Query: 671 SMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTE 730 S +ME+ E ++ L MGV L++DDFGTG+S L+ L P+ +KID+SFV + Sbjct: 700 SSVMENPQEAIHILERLGRMGVTLAIDDFGTGYSSLAYLKLFPIDHLKIDRSFVADIEHD 759 Query: 731 KRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 A+ ++ SL L V+AEGVET++Q E+LR C +QG+ FS+PL + Sbjct: 760 LNDRAIAFGTIALAHSLGLNVIAEGVETEDQHELLRANGCDEVQGFLFSKPLTGAAAFAF 819 Query: 791 MSSV 794 + + Sbjct: 820 LHAR 823 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 800 bits (2068), Expect = 0.0, Method: Composition-based stats. Identities = 211/836 (25%), Positives = 358/836 (42%), Gaps = 70/836 (8%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEV--IGNNIDMLIPRDL 65 + ++ + ALE G N + FF+ ++ GY E G+ + D Sbjct: 78 HDSEERWKFALEGAGDGVWDWNPQTDEAFFSKRWNEIIGYTEHEFPATGSAWVAHLHPDD 137 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFA---LSKVSAEGKVYYLALV 122 + I+ + E E ++ KDGS W +S+ + + Sbjct: 138 KDRVLSVIQGYLTDSR---EIYDVEYRIRCKDGSWKWILARGMLVSRDVYGKPLRMIGTH 194 Query: 123 RDASVEMAQKE----QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 D + +E + D L V +++ + IV N + + G Sbjct: 195 SDITQRKVDEELVLKNLEKWKKLFDILPIGVSIVNSKNGIVDFNPSLEAILGISKEGLLQ 254 Query: 179 MQPD---------TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASIS 229 D T ++ EFP+ I+ Q+++ + +G+ IW S + Sbjct: 255 GDYDNWEYLRTDNTHMDADEFPSLRAIKEQRVVKDV-----VIGVKKESGDIIWTSVSAA 309 Query: 230 PV-YDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMC--SSPPFHEMGEIICRNIESVL 286 P+ YD + V +DIT+ +Q A + ++ R + Sbjct: 310 PLSYDS----NSCVTVTTDITKRKQFESELRVSATAFETQEGILITDENNVMLRTNAAFT 365 Query: 287 NESHVSLFALRNGMPIHWASSS--------HGAEIQNAQSWSATI--RQRDGAPAG---- 332 + + P +S I W I R+++G Sbjct: 366 AITGYTNKEAIGQNPRLLSSGRQNASFYSAMWKAINTTGVWEGEIWNRRKNGEIYPEHLT 425 Query: 333 ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHN 392 + +K +G + ++ ++D++Q ++ + + IE L FDP+T LPNR L + Sbjct: 426 VTAVKDRNG-MVTNYVGVLSDLTQ--------RKAAEEKIENLAFFDPLTKLPNRRLLLD 476 Query: 393 YLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLC 448 L + A V I +D+ + + D+ G+ D L +V R ++ + Sbjct: 477 RLKQAMASATRSVTNGAVLFIDLDNFKALNDTYGHPMGDLLLQQVAKRLVSSVRDGDTVS 536 Query: 449 RIEGTQFVLVSLEND------VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLG 502 R G +FV++ D S + +++ + +P +I + T SIG + Sbjct: 537 RFGGDEFVVLLEGFDENPLDAASQAETVGEQIFAALRQPYLIGTHEYHGTSSIGATLFND 596 Query: 503 --KNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLV 560 ++ D L+ A AM +K G N +FF P M E + +R L L++AI N+Q +L Sbjct: 597 KQQSIDELMKQADIAMYQAKKEGRNVLRFFDPQMQETIAKRTALEGDLRKAIENHQFQLH 656 Query: 561 YQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLA 620 YQ Q+ E+ +G EAL RW P HG V P +FIPLAEE I IG WV+ AC ++ Sbjct: 657 YQIQVD-ESRHPFGAEALIRWFHPEHGMVSPDQFIPLAEESDLILPIGYWVLETACARIQ 715 Query: 621 EWR-SQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTE 679 W+ LSVN+SA FR NQV + + I+ L +E+TESM++++ + Sbjct: 716 RWQHDAKTSGFVLSVNVSAKQFRQTDFVNQVQSLIQQYEINPSLLKLELTESMLLDNIED 775 Query: 680 IFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEA 739 + L+++GV S+DDFGTG+S L L LP+ ++KID+SFV + A++ Sbjct: 776 TIATMSALKELGVKFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFVRDIAVDASDRAIVRT 835 Query: 740 ITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 I ++ SL+L V+AEGVET+EQ + L C+ QGY F +P+P E+ + L Sbjct: 836 IIAMAHSLDLDVIAEGVETEEQQKHLSSKGCKNFQGYLFGKPVPIEQFETSLRKSL 891 Score = 61.6 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 47/133 (35%), Gaps = 3/133 (2%) Query: 127 VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE--ASGMQPDTL 184 E + + A++ V +P+ ++ + E+ GY E A+G Sbjct: 73 TEEKLHDSEERWKFALEGAGDGVWDWNPQTDEAFFSKRWNEIIGYTEHEFPATGSAWVAH 132 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV-YDVLAHLQNLVM 243 L+ + + L E+ + + G WI A V DV ++ Sbjct: 133 LHPDDKDRVLSVIQGYLTDSREIYDVEYRIRCKDGSWKWILARGMLVSRDVYGKPLRMIG 192 Query: 244 TFSDITEERQIRQ 256 T SDIT+ + + Sbjct: 193 THSDITQRKVDEE 205 >UniRef50_C1DD31 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DD31_LARHH Length = 910 Score = 800 bits (2068), Expect = 0.0, Method: Composition-based stats. Identities = 226/823 (27%), Positives = 362/823 (43%), Gaps = 68/823 (8%) Query: 10 ADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML----IPRDL 65 + F E G ++ ++ VM N + + G E V G ++ + R + Sbjct: 100 NEDRFRYCFEHLPFGLLVFDQTGRVMVCNRHFDTMMGLSEEAVHGLDLTAMPVPGFSRAV 159 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDA 125 R A + H G+ V G +R+L + FA + + +A++ DA Sbjct: 160 RQALAGDVGHFF--GEIPVAGGTRQLGVR--------AVFAPLRTPSGQVPRGVAILEDA 209 Query: 126 SV----EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 + R+ + +D I D + + NRA MFG+ EA G Sbjct: 210 LDNPRWQDELLAGRRRRQLFLDQSVLAAIEWDDGFCVQEWNRAAERMFGFSREEAIGQHA 269 Query: 182 DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNL 241 +L +R LQ L+ + + TR G I + + + D + Sbjct: 270 FFILPSEVRATLDREVLQSLMRQEGGWHSVNVNQTRDGALIQCEWFNTTLVDSNGKSLGV 329 Query: 242 VMTFSDITEERQIRQL--------------------EGNI--LAAMCSSPPFHEMGEIIC 279 DITE++ + I L + C + GE++ Sbjct: 330 TSLVLDITEKQAREDELRVAAQVYEQSREGILITDAQHRIVMLNSRCCELTGYTQGEVVG 389 Query: 280 RNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAP-AGILQI 336 E + +ES VS P H + W+ + RQR+G L + Sbjct: 390 TTPEWMFSESQVS-------TPGFVELCRH---LDEQGGWAGELLLRQRNGQLFLAWLTL 439 Query: 337 KTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDD 396 +T ++ + D+S +++ + + I+ L FD +TGLPNR L + + Sbjct: 440 RTVRLGTSTYHVCMFGDLS--------DRQAAERRIQYLAYFDTLTGLPNRALLTDRANM 491 Query: 397 LV-----DKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIE 451 + D A + + L+ +DH + + D+LG++ DQ L V R + ++ + R Sbjct: 492 ALRGVEGDAAPALALLLLDIDHFKHINDTLGHSTGDQLLQSVAKRLQATVREGDTVSRQG 551 Query: 452 GTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLL 509 G +FV++ + + S +A E+ + I + +++SIGI+ D G + L Sbjct: 552 GDEFVVLLPDANASRAASVAQEILRRLGFVCRIGEHDISVSVSIGIAMAPDDGTDFATLS 611 Query: 510 STAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAET 569 A AM ++ G N +FF P M E + L AL+ A+ +++L YQPQ+ +T Sbjct: 612 KCAEIAMYRAKQEGRNTLRFFFPEMQERTLRHVQLTGALRGAVERGEMQLHYQPQVDLQT 671 Query: 570 GELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHI 629 GEL G+EAL RW PL G V P FIPLAEE G I IG WV+ A RQLA+W + Sbjct: 672 GELSGVEALLRWTHPLFGAVSPGEFIPLAEESGLIIPIGDWVLRTAARQLADWLRDGLPP 731 Query: 630 PALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRD 689 ++VNLS L F L Q++ + G+ VE+TESM M I L Sbjct: 732 MVMAVNLSVLQFNLPGLAQQIASILSEAGVPPALFEVELTESMAMTEPEAAIATIDELHS 791 Query: 690 MGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNL 749 +GV +S+DDFGTG+S L+ L + +KID SFV ++ A+++AI + +SL L Sbjct: 792 VGVQVSLDDFGTGYSSLAYLKRFRLDRLKIDGSFVRDADSDPEDRAIVDAIVGMAESLGL 851 Query: 750 TVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 VAEGVET Q E++R + +QGY+ SRPLPA + W+ Sbjct: 852 ATVAEGVETSGQLEVIRALGGDAVQGYWISRPLPAAGLVAWLE 894 >UniRef50_C8KHS7 Putative phosphodiesterase/diguanylate cyclase n=1 Tax=Gluconacetobacter intermedius RepID=C8KHS7_9PROT Length = 865 Score = 800 bits (2067), Expect = 0.0, Method: Composition-based stats. Identities = 305/838 (36%), Positives = 472/838 (56%), Gaps = 53/838 (6%) Query: 11 DGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHP 70 PALEQ ++G VLI+EN+ V FFN AAE+LW R++VIG N+++L+PR++R H Sbjct: 10 QVTVLPALEQTILGVVLIDENNTVTFFNRAAERLWHCARQDVIGRNVNVLVPRNIRSTHD 69 Query: 71 EYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMA 130 + IRHNRE G ++ G SRE+ +E+ DG+ W +LS+++ +GK+ Y+AL+RD S E+ Sbjct: 70 DLIRHNRETGINKIVGTSREVLVERLDGTSFWANLSLSRIAVDGKIGYMALIRDISQEVD 129 Query: 131 QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEF 190 +E+ R L + V DR V +LDPE I+ NRAF++MFG+ +G +L Sbjct: 130 DREKIRLLSLVVRETDRGVAILDPEFRIIYVNRAFSDMFGFGPERVTGHGLSVILAGDTT 189 Query: 191 PADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITE 250 +L + E +G IW+ A+++PV+ ++N+V+ +DITE Sbjct: 190 DIGILNKLHEGARNARGFTLEIRARHASGRDIWVSAAMNPVFSESGEVENIVVVLTDITE 249 Query: 251 ERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNES--------------------- 289 + + L+ + L A+ S HE+ + ICR IE + + Sbjct: 250 QHFLDSLQRDTLEAISSDLSLHEVMDFICRRIEHYIPDVMPAIYLVEKDEHLKCKGRASL 309 Query: 290 HVSLFALRNGMPIHWASSSHG-----------AEIQNAQSWS----------------AT 322 +SL L + +PI ++ G +I + W Sbjct: 310 PLSLVKLYDTLPIGDGAACSGIAAATGNVTECPDIAHDPRWQHLREQTLHNGIKAARATP 369 Query: 323 IRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMT 382 I R+ AG+ + + A A ++ S H+ LA+E+ ++++HI +L FD +T Sbjct: 370 IILRNNRIAGVFTCYSRTDALPDAACQKAVATSLHLCTLAIERHEAKEHINRLSDFDLLT 429 Query: 383 GLPNRNNLHNYLDDLVDKAVSPVVYLI--GVDHIQDVIDSLGYAWADQALLEVVNRFREK 440 LPNR L + ++ + V + L+ GVD+ + + D G+ D+ + + + RE Sbjct: 430 SLPNRRWLRQNMARMLRRHVRGNLMLLTVGVDNFKHINDVFGHTAGDELIAYIAGQLREV 489 Query: 441 LKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY- 499 L D L R G QF +V + + + ++ + V+S P I P L+ S+G++ Sbjct: 490 LTIDDTLVRSGGDQFTIV-TNGEQQHASSLSATILRVLSTPTHIGAVPVSLSASLGVAVH 548 Query: 500 -DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLK 558 + G++ D LL A AM + NGG FFSP MN+ +RL+L AAL++AI++++L+ Sbjct: 549 PENGEDGDTLLKNAETAMFQAKANGGGHCCFFSPRMNQQASDRLILAAALRDAITHDRLR 608 Query: 559 LVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQ 618 L YQPQ+ A +G+LYG+EAL+RW DP G V P+RFI +AEE G+IE IG+W + AC Q Sbjct: 609 LFYQPQVHARSGQLYGVEALSRWIDPSLGFVSPARFITVAEETGQIEAIGKWSLRAACMQ 668 Query: 619 LAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDT 678 +A+W + +P +SVNLS LHFR LP V ++ GI +LT+EITES M+++ Sbjct: 669 MAQWVGDGVDVPVVSVNLSPLHFRDETLPEFVDKLLNETGIPPQRLTIEITESTMIDNYE 728 Query: 679 EIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLE 738 + Q LR+MGVG+S+DDFGTGFS LS L LPV E+KID+SF+ + +++ A++ Sbjct: 729 RTIRVAQKLREMGVGMSMDDFGTGFSSLSNLAGLPVNEVKIDRSFMTGLESIEKVRAVVM 788 Query: 739 AITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLP 796 A+ IGQSL +TVVAEGVE +EQ +L + C V+QGY FS+PLPAEE+ W S+ P Sbjct: 789 AVVRIGQSLGMTVVAEGVEHEEQRRLLADMDCDVLQGYMFSKPLPAEELAAWFSAYQP 846 Score = 66.6 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 D + + + G +++ +++ N A ++G+ E V G+ + +++ D Sbjct: 130 DREKIRLLSLVVRETDRGVAILDPEFRIIYVNRAFSDMFGFGPERVTGHGLSVILAGDTT 189 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAE-GKVYYLALV-RD 124 I + G G + E++ G IW A++ V +E G+V + +V D Sbjct: 190 DI---GILNKLHEGARNARGFTLEIRARHASGRDIWVSAAMNPVFSESGEVENIVVVLTD 246 Query: 125 ASVEMAQKEQTRQLIIAVDH 144 + + R + A+ Sbjct: 247 ITEQHFLDSLQRDTLEAISS 266 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 799 bits (2065), Expect = 0.0, Method: Composition-based stats. Identities = 205/822 (24%), Positives = 368/822 (44%), Gaps = 44/822 (5%) Query: 2 KLTD-ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 KLT+ + ++ + ++ G + +++ NPA + Y + + I Sbjct: 423 KLTEESLQVSEQKYRHIVDHAPFGITRTTRDGKLISANPAMANILKYDSSQELLETIGRS 482 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YY 118 +++ ++P + L L KDGS R ++S +G Y Sbjct: 483 SLQEVIFSNPADREDMVDKVIISNSWCLHNLSLRCKDGSLATCRVHSRRLSEKGSQNWEY 542 Query: 119 LALVRDASVEMAQKEQTRQ----LIIAVDHLDRPVIVLD-PERHIVQCNRAFTEMFGYCI 173 + D + ++ ++ ++ + ++ + + + + +FGY Sbjct: 543 ENFLEDITEQLETQQTLQKNKKNIQQLAENTEAVLYEYNLSDNKWTYMAPQVERIFGYKP 602 Query: 174 SEASGMQPDTL-LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVY 232 + Q ++ ++ +R L +L + A E+ + G +W++ I Sbjct: 603 EDWIDNQFWLDRVHEADWGKASREELSKLNQQEAHS-IEYRFYKKDGSIVWVRDIIRIES 661 Query: 233 DVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICR------NIESVL 286 D L L DIT+ +Q + A+ SP + + R + Sbjct: 662 DAENKL-CLHGLLIDITDSKQSESQLKKLSRAIEQSPVSVVITDPEGRIEYVNPKFTQLT 720 Query: 287 NESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQIKT- 338 + + A L++G + S I + + W + +++DG+ + Sbjct: 721 GYTLEEVIAQNPRILKSGNLLPSVYDSLWKTITSGKEWYGELENKRKDGSIFWESASISP 780 Query: 339 --SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDD 396 + FI DI+Q ++ + + +E + D +TGL NR L+++L+ Sbjct: 781 LFDESGKIINFIGVKEDITQ--------RKLNEKRLEYMATHDGLTGLANRTLLYDHLEI 832 Query: 397 LVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEG 452 + ++ V L+ +D + + DSLG+ DQ L V R ++ ++ + R+ G Sbjct: 833 ALHQSQRSKKLVAVILLDLDRFKVINDSLGHLVGDQVLKAVGQRLKQYVRSTDTVARLGG 892 Query: 453 TQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGKNRD--YLL 509 +FV++ + D + +IA L +++P + + ++ S GI N D LL Sbjct: 893 DEFVVLLTDVRDTTAAGKIAHNLLRKLNEPFFLHGRELYVSASFGICLSETDNVDGTILL 952 Query: 510 STAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAET 569 A AM + G + F+S MNE + + L + +L++A+ N+ +L YQP++ T Sbjct: 953 RNADIAMYKAKAEGCGLY-FYSHEMNEHLIKTLEMENSLRQALEKNEFQLYYQPKVEHAT 1011 Query: 570 GELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHI 629 G + G EAL RW P G +PPS FIPLAEE G I IG WV+AEACRQ W ++ + Sbjct: 1012 GRIIGCEALLRWRHPQRGMIPPSEFIPLAEETGLIVQIGHWVLAEACRQSKIWETEGLPP 1071 Query: 630 PALSVNLSALHFRS-NQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILR 688 ++VN+SA F L V + + QL +E+TESM+M+ + ++ ++ Sbjct: 1072 LTMAVNISARQFYQGENLIQAVKSTLERSQLVPSQLELELTESMVMKDAVNAERTMRKIK 1131 Query: 689 DMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLN 748 +GV LS+DDFGTG+S L+ L S PV +KID+SF+ ++ A+L +I +I +L Sbjct: 1132 QLGVSLSLDDFGTGYSSLNYLRSFPVDSLKIDRSFILDIASDASSAAILNSIIAIAHTLG 1191 Query: 749 LTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 L VAEGVE +Q ++ C IQGY FSRPLP E+ Sbjct: 1192 LQTVAEGVENNDQLALVANCGCNYIQGYLFSRPLPPEDFVAL 1233 Score = 51.6 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 56/171 (32%), Gaps = 7/171 (4%) Query: 122 VRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPE--RHIVQCNRAFTEMFGYCISEASGM 179 R + + Q + VD+ + E IV ++ ++ FGY E Sbjct: 126 WRVRQDNTLLEMELCQANLIVDNSPAVLFHWKAEDGWPIVSVSKNISQ-FGYAQEELMSG 184 Query: 180 QPD--TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 TL++ + Q+ Q E+ ++T+ E W+ D Sbjct: 185 DFSYATLVHPKDLDRLEEELQAQINRGERIFQTEYRIITKQKEVRWVDERTFVERDAAGK 244 Query: 238 LQNLVMTFSDITEERQIRQLEGNILAA--MCSSPPFHEMGEIICRNIESVL 286 + + DI E ++ + + + ++ ++ E E++ Sbjct: 245 VSHYQGFIIDIDERKRTELVMAARMRLLQLATNNTLAQLLEATLDEAEALT 295 >UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SP12_9RHIZ Length = 894 Score = 795 bits (2055), Expect = 0.0, Method: Composition-based stats. Identities = 222/848 (26%), Positives = 380/848 (44%), Gaps = 72/848 (8%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVI-GNNID-MLIPRDLRPAHPE 71 F ++ G L + + ++ NP +++ E ++ G + +++ R Sbjct: 50 FATVIDNISQGICLFDPEERLILSNPRYSEIYRVPPERLVPGITLREIVVHRVAAGTSAM 109 Query: 72 YIRHNREGGKARVEG-MSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMA 130 + ++ G +SR + DG + + G +++ D + +A Sbjct: 110 SVDEYLALARSVNSGAISRTWAADLADGRTVQVYHH--PMPDGG---WVSTHEDVTELIA 164 Query: 131 QKEQTRQ---LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI 187 ++ + L +D + + V D E + NRA G + D L+ Sbjct: 165 TRQIVDERISLQTLIDWVPDYLWVKDSESRFIVANRALAADSGRETTRDMIGLTDFDLHA 224 Query: 188 PEFPADNRIRLQQLLWKTARD-QDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 PE + R +L +E ++ R+G W+ ++ P+ + + LV Sbjct: 225 PELASKFRADELSVLQTGQPMIDEEEFVVDRSGAGKWLSSTKVPLRNDRNDVFGLVGIAH 284 Query: 247 DITEER---QIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALR------ 297 DIT + +R + IL + + P ++ + + R +ES L S+ L Sbjct: 285 DITGRKREDMLRTGQAEILEMIATGAPLDDVLDRLMRLMESQLTGILGSVLLLDKEGRHL 344 Query: 298 ----------------NGMPIHWASSSHGAEIQNAQ------------------------ 317 +G+ I S G + + Sbjct: 345 RHGAAPSLAEGYINAIDGVAIGPKVGSCGTAVFRREPVVVADIMRDPLWDDYRDLAERYG 404 Query: 318 ---SWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQ 374 WS I GA G+ + + + E + R+ + + +A +A+E++K+ I Sbjct: 405 YRSCWSTPIVSHQGAVLGVFAMYSMTVREPAEAETRLINFTTRIAGIAIERKKAEDQIHF 464 Query: 375 LIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQAL 430 + D +TGLPNR L + L + A V I +D+ + + D+LG+ D+ L Sbjct: 465 MANHDVLTGLPNRALLQDRLSQAILHAQRYDRWVSVVFIDLDNFKLINDTLGHNAGDRLL 524 Query: 431 LEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN--DVSNITQIADELRNVVSKPIMIDDKP 488 V R + + R+ G +FVLV + +V I + +LR +++P+ + D Sbjct: 525 KTVAERMVGCISSTDTIVRLGGDEFVLVLSDQPKNVDLIAETLQKLRTAIAEPLQLGDHC 584 Query: 489 FPLTLSIGIS--YDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGA 546 T SIGI+ GK + L++ A AM + G + +QF++P N ER +L Sbjct: 585 VRATASIGIATYPKDGKAPESLVANADAAMYRAKAVGRDNFQFYAPEFNTRAHERFLLQE 644 Query: 547 ALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIEN 606 L+ A++ +Q +L YQPQI + ++ +EAL RW+ P HG + P FIP AEE G I Sbjct: 645 ELRTALARSQFELFYQPQIDLRSVQIVAVEALIRWNHPAHGAMAPVGFIPTAEETGLIVP 704 Query: 607 IGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTV 666 IG WV+ EACRQ W+ + +SVN+SA F L +V A+ ++G L + Sbjct: 705 IGDWVLHEACRQNKAWQDLGLEPITVSVNVSARQFSEKNLVERVVHALSESDLEGCYLEL 764 Query: 667 EITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDR 726 E+TES++M+ + L+ +GV +S+DDFGTG+S LS L + P+ +KIDKSF+D Sbjct: 765 ELTESLIMQDVGLAVTTMNKLQSLGVQISIDDFGTGYSSLSALKTFPIARLKIDKSFIDD 824 Query: 727 CLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEE 786 T + A+ A+ S+GQ L + V+AEGVET EQ LRK +C +QGY FS+P+ + E Sbjct: 825 VATNEDDQAVASAVISLGQKLKMRVIAEGVETDEQVAFLRKNNCDEMQGYHFSKPVCSRE 884 Query: 787 IPGWMSSV 794 I + S Sbjct: 885 IERLLESR 892 Score = 44.3 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 107/335 (31%), Gaps = 51/335 (15%) Query: 107 LSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFT 166 L++ S EG+ L + + + Q + +D++ + + + DPE ++ N ++ Sbjct: 24 LARTSYEGRQCDL-----DAKLQSLEAQALRFATVIDNISQGICLFDPEERLILSNPRYS 78 Query: 167 EMFGYCISEAS-GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEK---I 222 E++ G+ ++ + + + + L + T + Sbjct: 79 EIYRVPPERLVPGITLREIVVHRVAAGTSAMSVDEYLALARSVNSGAISRTWAADLADGR 138 Query: 223 WIKASISPVYDVLAHLQNLVMTFSDITE---ERQIRQLEGNILAAMCSSPPF----HEMG 275 ++ P+ D V T D+TE RQI ++ + P + Sbjct: 139 TVQVYHHPMPDG-----GWVSTHEDVTELIATRQIVDERISLQTLIDWVPDYLWVKDSES 193 Query: 276 EIICRNIESVLN---ESHVSLFALRNG--MPIHWASSSHGAEIQNAQSWSATI------R 324 I N + E+ + L + AS E+ Q+ I Sbjct: 194 RFIVANRALAADSGRETTRDMIGLTDFDLHAPELASKFRADELSVLQTGQPMIDEEEFVV 253 Query: 325 QRDGAPAGILQIKT---SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPM 381 R GA + K + + + DI+ L + + +E + Sbjct: 254 DRSGAGKWLSSTKVPLRNDRNDVFGLVGIAHDITGRKREDML-RTGQAEILEMIA----- 307 Query: 382 TGLPNRNNLHNYLDDLVDKAVSP------VVYLIG 410 TG P L + LD L+ S V L+ Sbjct: 308 TGAP----LDDVLDRLMRLMESQLTGILGSVLLLD 338 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 793 bits (2050), Expect = 0.0, Method: Composition-based stats. Identities = 198/817 (24%), Positives = 343/817 (41%), Gaps = 51/817 (6%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 T AD D + ++ +E + N A E G + E+IG L Sbjct: 11 TVADEGEDSLLRALIDVIPDLVFFKDEAGRYLGCNRAFEAYTGRREAELIGYTDRDLFDL 70 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRF--ALSKVSAEGKVYYLAL 121 ++ Y G++ E + DG ++ + +A G+ + + Sbjct: 71 STADSYRGYDNAVLASGRSS----RNEEWIVYPDGRRVLVDTLKTPFRDAASGRRGVVGI 126 Query: 122 VRDASVEMAQKEQTRQLIIAVDHLD----RPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 RD +V E R+ ++ +D + + +FG +A Sbjct: 127 SRDVTVFRETAEALRRSQENLERAQAVARTGSWYVDFVSGQMDWSAETCRLFG----QAP 182 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTR---TGEKIWIKASISPVYDV 234 G P L + +++ L + W+ A + ++ L R GE W+ Sbjct: 183 GCVPSYELFLSVVHPEDQA-LVEAAWRQAVARGDYDLTHRVIVGGEVRWVHERAEFRRAA 241 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNE 288 + T DIT+ + Q ++ + + + R + Sbjct: 242 DGAALAGIGTVQDITDRKLAEQSLRQAATVFENTGEGVIIADAKNRIIAVNRAFTVITGY 301 Query: 289 SHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG---ILQIKT 338 + LR+G + + A W I R+++G L + Sbjct: 302 GPEEVIGRSPNLLRSGRHDAAYYDAMWRGVHEAGHWQGEIWNRRKNGEIFPELLTLSVVR 361 Query: 339 SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV 398 + S ++ +DIS+ +++ +++L +D +T LPNR L+ L V Sbjct: 362 DHNGKVSHYVGVFSDISRM--------KETEARLQRLAHYDALTDLPNRVLLNLRLAHGV 413 Query: 399 DKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQ 454 ++ V + +D ++V DSLG+ D+ L+E+ R R +++ + L R+ G + Sbjct: 414 ERVQRSGEMLAVLFLDIDRFKNVNDSLGHPVGDELLIEIARRLRSRIRAEDTLARLGGDE 473 Query: 455 FVLVSL-ENDVSNITQIADELRNVVSKPIMI-DDKPFPLTLSIGISYD--LGKNRDYLLS 510 FV++ +++ A E+ +++++ + + + SIGIS + L+S Sbjct: 474 FVILLDRIRSANDVADFAQEIIDLLNQSFQLASGQEVFVGASIGISLYPLDTDDATQLIS 533 Query: 511 TAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETG 570 A A+ ++ G N ++F++ + ERL L AAL+ + + L +QP + + G Sbjct: 534 NADAALYQAKEAGRNVYRFYTADLTRAAHERLGLEAALRRGLERGEFVLHFQPVVALDKG 593 Query: 571 ELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIP 630 E+ G EAL RW+ P G + P RFIPLAEE G I +G WV+ ACRQ EW Sbjct: 594 EVVGAEALVRWNHPTEGMIAPLRFIPLAEETGLIVPLGEWVLESACRQGREWLDCG-RPL 652 Query: 631 ALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDM 690 ++VNLS FR+ L V D + G L +EITES +ME + L+ + Sbjct: 653 TIAVNLSTRQFRAGDLTATVRDILDRTGFPAALLELEITESTVMEDADRAVATLAALKGL 712 Query: 691 GVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLT 750 GV LS+DDFGTG+S L+ L V +KID+SFV ++ ++ + ++ + L Sbjct: 713 GVRLSIDDFGTGYSSLAYLKRFAVDALKIDRSFVRDIADDENDRMIVATVVAMAHQMRLG 772 Query: 751 VVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 V+AEGVET EQ LR + C QGY RP A + Sbjct: 773 VIAEGVETAEQLAFLRSLGCEAYQGYLVGRPQAAADF 809 Score = 74.3 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 38/271 (14%), Positives = 85/271 (31%), Gaps = 28/271 (10%) Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 +A + + L +D + V D + CNRAF G +E G L Sbjct: 8 DLETVADEGEDSLLRALIDVIPDLVFFKDEAGRYLGCNRAFEAYTGRREAELIGYTDRDL 67 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 ++ + R +L ++E ++ G ++ + +P D + + +V Sbjct: 68 FDLSTADS-YRGYDNAVLASGRSSRNEEWIVYPDGRRVLVDTLKTPFRDAASGRRGVVGI 126 Query: 245 FSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNI--ESVLNESHVSLFALRNG--- 299 D+T R+ + + + G + + + LF G Sbjct: 127 SRDVTVFRETAEALRRSQENLERAQAVARTGSWYVDFVSGQMDWSAETCRLFGQAPGCVP 186 Query: 300 -MPIHWASSSHGAEIQNAQSWSATIRQRD----------GAPAGI---LQIKTSSGAETS 345 + + + +W + + D G + + + ++ Sbjct: 187 SYELFLSVVHPEDQALVEAAWRQAVARGDYDLTHRVIVGGEVRWVHERAEFRRAADGAAL 246 Query: 346 AFIERVADISQHMAALALEQEKSRQHIEQLI 376 A I V DI+ +++ + Q + Q Sbjct: 247 AGIGTVQDIT--------DRKLAEQSLRQAA 269 >UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK65_9PROT Length = 1327 Score = 792 bits (2047), Expect = 0.0, Method: Composition-based stats. Identities = 209/843 (24%), Positives = 356/843 (42%), Gaps = 71/843 (8%) Query: 6 ADNAADGIFFPAL-------EQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNID 58 A AA+ +L + M+G + N ++ N E+++GY + G Sbjct: 499 ARRAAEEALVESLWEQQLIFDNAMIGISY-HRNRMILRCNRRCEEIFGYLEGGLAGQPTR 557 Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKVY 117 +L D E + G A E EL +++DG+ IW + + Sbjct: 558 VLFASD---EAWEAVGRQVYGESASGETFDGELLYQRRDGTPIWVHAIGRTIGESADSET 614 Query: 118 YLALVRDASVEMAQKEQTRQ----------------------LIIAVDHLDRPVIVLDPE 155 ++ D + + A ++ RQ + ++ + PV E Sbjct: 615 WIWAYADVTAQRAAEQALRQSHLELEQRVADRTLELSQQLHFMRQLIEAIPGPVFYKSQE 674 Query: 156 RHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLL 215 + CN+AF E+ G E G + +LL + E +L Sbjct: 675 GRYLGCNQAFLELIGKSRDEVVGATVYDVAPADLADRYKAAD-DELLARLGSQVYEARVL 733 Query: 216 TRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMG 275 G + + + LV DITE +++ SS + Sbjct: 734 DADGHYRDVIFHKATYGKPGENGGGLVGVMLDITERKRMEARLLQAATVFDSSAEGITIT 793 Query: 276 E------IICRNIESVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI- 323 + R + + + L++G + W + Sbjct: 794 APDGNIIAVNRAFTEITGYTEDEVIGRNPRMLQSGFQDRRFYLDMWQALGTQGRWRGELW 853 Query: 324 -RQRDG----APAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQF 378 R++DG I +K + G + ++ +DI+ E ++ ++ Sbjct: 854 NRRKDGQTFLESLTISAVKDAQGK-VAHYVGVFSDIT--------ELRRAHDQLDHQAHH 904 Query: 379 DPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVV 434 DP+TGLPNR L + L + +A V+ I +D +++ D+LG+ D+ L EV Sbjct: 905 DPLTGLPNRLLLGDRLHKALQRAHRDETGLAVFFIDLDRFKNINDTLGHQVGDRVLCEVA 964 Query: 435 NRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSK-PIMIDDKPFPLT 492 R ++ + R+ G +F++V + + + ++ IA+++ NV+ P+ ++ F + Sbjct: 965 WRLGRLMRESDTVGRLGGDEFLIVIEDVGEPTAVSHIAEKILNVLQASPVTVE-HEFFVG 1023 Query: 493 LSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKE 550 SIGIS G + + L+ A AM ++ G N ++FF+ + + RL + L+ Sbjct: 1024 ASIGISVFPQDGADAETLMKNADVAMYRAKERGRNTYEFFTKDLTQTSLARLQMETDLRR 1083 Query: 551 AISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRW 610 AI +L++ QPQ TG++ G EAL RW P G V P FI LAEE G I IG W Sbjct: 1084 AIERGELRVYLQPQFSLATGKVVGAEALVRWLRPQQGLVLPGEFIKLAEESGLIVPIGEW 1143 Query: 611 VIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITE 670 V A Q A W + + LSVN+S + F ++ + G+ L +EITE Sbjct: 1144 VQGTAACQWATWVAAGLAPGVLSVNVSGVEFARGRIQQTARRTLELSGLPARFLELEITE 1203 Query: 671 SMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTE 730 S +M H + + LR MG+ L +DDFGTG+S L+ L LP+ ++K+D+SFV + Sbjct: 1204 SAIMSHAENSVQVLDNLRAMGISLVIDDFGTGYSSLAYLKRLPLNKLKVDQSFVRGLPND 1263 Query: 731 KRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI-PG 789 A+ A+ ++G SL LTV+AEGVET+ Q E L C +QGY RP+P ++ Sbjct: 1264 TEDCAIARAVIALGHSLQLTVIAEGVETEAQREFLTGEGCDEMQGYLRGRPMPFDDYHAR 1323 Query: 790 WMS 792 ++S Sbjct: 1324 FLS 1326 Score = 124 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 69/423 (16%), Positives = 138/423 (32%), Gaps = 40/423 (9%) Query: 6 ADNAADGIFFP----ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 A AA E +G + + + NP+ E+++GY ++IG + Sbjct: 252 ASAAAMDALLREQTLIFEAAPIGIAFV-RDRIIQRCNPSLERIFGYSPGQLIGQSTRCFF 310 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKVYYLA 120 + + E+Q K DG IW R S E + Sbjct: 311 ASE---EAWREKGERAQLLIDECGSFVGEVQYCKSDGLPIWCRVTGSLANPGEPGDGLVW 367 Query: 121 LVRDASVEMAQKEQ----TRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 L D + + R+ + + + L +R I +CN +F +FGY + Sbjct: 368 LFEDVTEKRQADRAMEALLREQALIFERAPTGIAFL-RDRVIQRCNPSFERIFGYAPGQL 426 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 G + R + ++ + E G IW + + S + + Sbjct: 427 LGQSTRVCFASEAAWREAGERAYAVADESGKFIGELEYCRADGTPIWCQVTGS-LLNPAN 485 Query: 237 HLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVL---NESHVSL 293 + V F D+T R E + + F I + ++ N + Sbjct: 486 PAEGYVWLFEDVTARRAAE--EALVESLWEQQLIFDNAMIGISYHRNRMILRCNRRCEEI 543 Query: 294 FALRNG------MPIHWASSSHGAEIQN--------AQSWSATI--RQRDGAPAGILQIK 337 F G + +AS + +++ + ++RDG P + I Sbjct: 544 FGYLEGGLAGQPTRVLFASDEAWEAVGRQVYGESASGETFDGELLYQRRDGTPIWVHAIG 603 Query: 338 TSSG--AETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLD 395 + G A++ +I AD++ AA ++ + +++ D L + + L Sbjct: 604 RTIGESADSETWIWAYADVTAQRAAEQALRQSHLELEQRVA--DRTLELSQQLHFMRQLI 661 Query: 396 DLV 398 + + Sbjct: 662 EAI 664 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 66/390 (16%), Positives = 136/390 (34%), Gaps = 40/390 (10%) Query: 14 FFPALEQNMMGAVLINENDEVMF-FNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEY 72 + L+ + + V +++ NP AE+L+G+ ++G + +P D Sbjct: 14 YKAILDHSGIAVVCT--RSRLVYRCNPRAEELFGWPAGTLVGQLDAVFLPDDASCDALRG 71 Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS-AEGKVYYLALVRDASVEMAQ 131 + V+ E +L ++DGS + A ++ + +VRD + E+ Sbjct: 72 TVRPQLRVGKIVD---LETRLARRDGSTFVAHLIARAIDPAAPRLGTVWIVRDVTQEVLT 128 Query: 132 KEQ----TRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI 187 ++ R+ + ++ + +++L ER I +CNR F E+ GY E G Sbjct: 129 RDTSARLLREQQLIFENAETGIVIL-RERIIQRCNRRFAELLGYAADELVGQSTRLYYPS 187 Query: 188 PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSD 247 E + R + +T + + R GE + S + + + V + D Sbjct: 188 EEAWLETGRRAYAAIAETGIYHGDTIFRRRNGESFCCHITGS-MMNRANPDEGYVWLYED 246 Query: 248 ITEERQIRQLEGNILA---AMCSSPPF---HEMGEIICR---NIESVLNESHVSLFALRN 298 ++E+R +L + + P II R ++E + S L Sbjct: 247 VSEKRASAAAMDALLREQTLIFEAAPIGIAFVRDRIIQRCNPSLERIFGYSPGQLIGQS- 305 Query: 299 GMPIHWASSSHGAE--------IQNAQSWSATIR--QRDGAPAG--ILQIKTSSGAETSA 346 +AS E I S+ ++ + DG P + + G Sbjct: 306 -TRCFFASEEAWREKGERAQLLIDECGSFVGEVQYCKSDGLPIWCRVTGSLANPGEPGDG 364 Query: 347 FIERVADISQHMAALALEQEKSRQHIEQLI 376 + D+++ A + + Sbjct: 365 LVWLFEDVTEKRQAD----RAMEALLREQA 390 Score = 62.4 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 73/261 (27%), Gaps = 25/261 (9%) Query: 132 KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFP 191 ++Q + +DH V V R + +CN E+FG+ G L Sbjct: 8 EQQLLEYKAILDHSGIAV-VCTRSRLVYRCNPRAEELFGWPAGTLVGQLDAVFLPDDASC 66 Query: 192 ADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEE 251 R ++ L E L R G + D A V D+T+E Sbjct: 67 DALRGTVRPQLRVGKIVDLETRLARRDGSTFVAHLIARAI-DPAAPRLGTVWIVRDVTQE 125 Query: 252 RQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVL---NESHVSLFALRNGMPIHWASSS 308 R +L F I E ++ N L + ++ Sbjct: 126 VLTRDTSARLLR--EQQLIFENAETGIVILRERIIQRCNRRFAELLGYAADELVGQSTRL 183 Query: 309 H--------------GAEIQNAQSWSA--TIRQRDGAPA--GILQIKTSSGAETSAFIER 350 + A I + R+R+G I + ++ Sbjct: 184 YYPSEEAWLETGRRAYAAIAETGIYHGDTIFRRRNGESFCCHITGSMMNRANPDEGYVWL 243 Query: 351 VADISQHMAALALEQEKSRQH 371 D+S+ A+ A R+ Sbjct: 244 YEDVSEKRASAAAMDALLREQ 264 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 791 bits (2045), Expect = 0.0, Method: Composition-based stats. Identities = 203/810 (25%), Positives = 349/810 (43%), Gaps = 45/810 (5%) Query: 12 GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEV-IGNNIDMLIPRDLRPAHP 70 A G ++I E+ ++++ N A K+ GY ++ +G++ LI R Sbjct: 250 NALSNAQSDAGEGVMVI-EDGKIIYANEAVRKIGGYDARDISMGSSFLSLIHPSDRE--- 305 Query: 71 EYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMA 130 +H ++ + E K G I A + +G + L+ D S Sbjct: 306 RVAQHYKQRIRGEYTPSRYEALAISKLGKPIPIEVAAANYR-DGSERIVVLIIDISSRKQ 364 Query: 131 QKEQTRQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL-- 184 +E Q V+ + V PE ++ + GY + E + + Sbjct: 365 AEEALLQSRAEYRKLVESVKAVVWRATPEAAFTFVSQEAESLLGYPVREWTSNTSFWVDK 424 Query: 185 LNIPEFP--ADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 L+ + P D R + L E+ + G +W++ + + D Q L Sbjct: 425 LHPDDRPWVVDFCARETRQLKDHVL---EYRMRAADGRTVWLQDIVRVIPDRFGKPQELF 481 Query: 243 MTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESHVSLFAL 296 DIT+ + + ++ + + + + + Sbjct: 482 GVMLDITDRKAAEESLNLSKQVFDNTSEAILIADRDRNILEVNQAYLDMTGYGREDCVGT 541 Query: 297 RNGMPIHWASS--SHGAEIQNAQSWSATI--RQRDGAPAGI---LQIKTSSGAETSAFIE 349 + A G +Q W + ++R G + + ++ Sbjct: 542 YLALLDEPAGGGQLIGNLVQQHGKWMGELLAQKRSGEYYPAWVSISTVHDNHGSLQNYVV 601 Query: 350 RVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PV 405 + DISQ ++++ + ++ L D +TGLPNR L ++ V +A Sbjct: 602 VLTDISQ--------RKQAEERLQFLATHDGLTGLPNRTLLQERMELAVLRAQRYQQCVG 653 Query: 406 VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDV 464 V I +D + + D+LG+ D L EV R E L+ + R G +FV++ + + Sbjct: 654 VLFIDLDRFKIINDTLGHQAGDVLLQEVAGRLGECLRQTDTIARQGGDEFVVLVEDFIEQ 713 Query: 465 SNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKN 522 + +A ++ + +++P ++ + ++ SIGIS D G + LL A AM + + Sbjct: 714 QYLVNVARKIMHALAQPFILMQQELYISASIGISVYPDDGVDISSLLKNADMAMYRAKDD 773 Query: 523 GGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWH 582 G N + F+S N RL L +L+ A+ N+ L+YQ ++ + G EAL RWH Sbjct: 774 GKNTFHFYSADGNANSVSRLTLENSLRRALERNEFSLLYQAKLDLAEQNIIGAEALIRWH 833 Query: 583 DPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFR 642 G V P FIP+AEE G I IG WV+ +ACR W+ + VN+SA FR Sbjct: 834 SAELGMVSPQDFIPVAEETGMIIEIGEWVLQQACRDACHWQEVAGRPIRVGVNISARQFR 893 Query: 643 SNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTG 702 + L +S+A+ G+ + L +EITESM+M++ + +Q R++G + +DDFGTG Sbjct: 894 EDSLYQAISNALEESGLTPNCLELEITESMIMQNAERASQMLQHFRNLGSYVLIDDFGTG 953 Query: 703 FSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQF 762 +S L L P+ +KID+SFV + +A+ +AI ++ SL + VVAEGVET+ Q Sbjct: 954 YSSLGYLKHFPIDSLKIDRSFVRDIPQDSDDMAITQAIIAMAHSLKINVVAEGVETQAQL 1013 Query: 763 EMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 E LR C +QGY FSRPL E+ G + Sbjct: 1014 EFLRGQGCDQLQGYIFSRPLVVEDFVGLLR 1043 Score = 57.7 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 50/144 (34%), Gaps = 11/144 (7%) Query: 1 MKLTDADNAADGIFFP--ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNID 58 + +TD A + + + ++ + + ++ N A + GY RE+ +G + Sbjct: 485 LDITDRKAAEESLNLSKQVFDNTSEAILIADRDRNILEVNQAYLDMTGYGREDCVGTYLA 544 Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--V 116 +L P + EL +K+ G ++S V Sbjct: 545 LL-------DEPAGGGQLIGNLVQQHGKWMGELLAQKRSGEYYPAWVSISTVHDNHGSLQ 597 Query: 117 YYLALVRDASVEMAQKEQTRQLII 140 Y+ ++ D S +E+ + L Sbjct: 598 NYVVVLTDISQRKQAEERLQFLAT 621 Score = 53.5 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 46/325 (14%), Positives = 99/325 (30%), Gaps = 28/325 (8%) Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL 119 R A + GG S E+ ++ +S + ++ Sbjct: 175 FHQRGAAAASLLIVMTALWGGGGYHGFFSMEISNAALFNYWMFALVTVS-IGVGLSGLHV 233 Query: 120 ALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA-SG 178 ++ Q L A V+V+ + I+ N A ++ GY + G Sbjct: 234 GRLQADERLRQQLGLYNALSNAQSDAGEGVMVI-EDGKIIYANEAVRKIGGYDARDISMG 292 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 +L++ + + Q++ + + E L +++ G+ I I+ + + D Sbjct: 293 SSFLSLIHPSDRERVAQHYKQRIRGEYTPSRYEALAISKLGKPIPIEVAAANYRD---GS 349 Query: 239 QNLVMTFSDITEERQIRQLEGNILA----------AMCSSPPFHEMGEIICRNIESVLNE 288 + +V+ DI+ +Q + A A+ + + ES+L Sbjct: 350 ERIVVLIIDISSRKQAEEALLQSRAEYRKLVESVKAVVWRATPEAAFTFVSQEAESLLGY 409 Query: 289 SHVSLFALRNG-------MPIHWASSSHGAEIQNAQSWSATIRQR--DGAPAG---ILQI 336 + + W E + + R R DG I+++ Sbjct: 410 PVREWTSNTSFWVDKLHPDDRPWVVDFCARETRQLKDHVLEYRMRAADGRTVWLQDIVRV 469 Query: 337 KTSSGAETSAFIERVADISQHMAAL 361 + + DI+ AA Sbjct: 470 IPDRFGKPQELFGVMLDITDRKAAE 494 >UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5X9_9PROT Length = 927 Score = 791 bits (2043), Expect = 0.0, Method: Composition-based stats. Identities = 218/814 (26%), Positives = 375/814 (46%), Gaps = 54/814 (6%) Query: 16 PALEQNMMGAVLINEND-EVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIR 74 +E + G VLI +D + + N E L+GY E+IG +I ++ + Sbjct: 134 QIVENAVEGIVLIKASDSTIQYTNRQFETLFGYAPGELIGKHISIINAPGNKSQMETAQE 193 Query: 75 HNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS-AEGKVYYLALVRDASVEMAQK- 132 NR+ K V S E+ +KDG+ I T S E ++ RD + + Sbjct: 194 INRQLEKEGV--WSGEVFNRRKDGTTINTFLNASSFQHPELGDLWIGYQRDITKRKLTEA 251 Query: 133 ---EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE 189 E+ Q A+D ++D + +++ N A+ + GY E GM L I + Sbjct: 252 VMLEKESQYRAAIDTAADGFWLVDMQGRLLEVNDAYARLSGYSREELIGMSIPELDAI-D 310 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 R R+++++ + + + + G + IS Y ++ + V + +D+T Sbjct: 311 NSELVRARIEEIIRNGGYLEFDTMHKRKDGSLWPV--HISTTYSSVSGGRCFVFS-TDLT 367 Query: 250 EERQIRQLEGNILAAMC-----SSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHW 304 E+++ + LAAM + + +I + + + + P + Sbjct: 368 EQKRAEESLR--LAAMVYENSSEAILVTDADNLIIAVNPAFEQMTGYAAAEVLGKNPRIF 425 Query: 305 ASSSHGAEIQNA--------QSWSATI--RQRDGAP----AGILQIKTSSGAETSAFIER 350 S H ++ W + ++++G I I+ GA + Sbjct: 426 KSGRHDRAFYHSMWLALDTEGYWHGEVWDKRKNGEEYIKLLTINVIRDDDGAIYRH-VAL 484 Query: 351 VADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VV 406 DI+ E++K + I + +D +T LPNR H+ L+ KA + Sbjct: 485 FTDIT--------ERKKVEELIWRQANYDSLTKLPNRQMFHDRLEQEAKKAHRAGLSMAL 536 Query: 407 YLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVS 465 LI +D ++V D+LG+ D L+E R ++ + R+ G +F+++ E D++ Sbjct: 537 LLIDLDRFKEVNDTLGHDKGDILLIEAARRISACVRESDTVARLGGDEFIVILSELEDMA 596 Query: 466 NITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNG 523 +I ++A ++ +++P +D +P ++ SIGIS + D L A AM + G Sbjct: 597 SIDRVAQDILGSLAEPFKLDAEPAYISASIGISLYPNDATELDVLFKHADQAMYVAKYAG 656 Query: 524 GNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHD 583 N + +F+ M E + R+ L L+ A++ Q ++ YQP + +G++Y EAL RW Sbjct: 657 RNRFNYFTKDMQEAAQARMHLANDLRIAVAAGQFRVYYQPIVEMSSGQIYKAEALIRWQH 716 Query: 584 PLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRS 643 P+ G V P+ FIPLAEE G I IG WV +A +Q+ +WR + +SVN S + FR Sbjct: 717 PVRGMVSPAEFIPLAEETGLIVPIGEWVFRQAVQQVVQWRRKFHRSFQISVNKSPVQFRH 776 Query: 644 NQLPNQVS--DAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGT 701 +S + + + G + VEITE ++++ + E+ K++ RD G+ +++DDFGT Sbjct: 777 ---AESLSWPEYLEQQHVSGDSIIVEITEGLLLDAEVEVNKKLLRFRDAGIQVAIDDFGT 833 Query: 702 GFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQ 761 G+S LS L + +KID+SFV LAL EAI + L V+AEGVET Q Sbjct: 834 GYSSLSYLKEFDIDYLKIDQSFVRNLGPGTSDLALCEAIIVMAHKLGFKVIAEGVETSTQ 893 Query: 762 FEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 E+L C QGY +SRPLP EE ++ L Sbjct: 894 HELLAAAGCDYGQGYLYSRPLPPEEFERQLAGKL 927 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 62/281 (22%), Positives = 111/281 (39%), Gaps = 12/281 (4%) Query: 2 KLTDADN-AADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 KLT+A + + A++ G L++ ++ N A +L GY REE+IG +I L Sbjct: 247 KLTEAVMLEKESQYRAAIDTAADGFWLVDMQGRLLEVNDAYARLSGYSREELIGMSIPEL 306 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA 120 D + E +R E + + ++KDGS + + S G ++ Sbjct: 307 DAID----NSELVRARIEEIIRNGGYLEFDTMHKRKDGSLWPVHISTTYSSVSGGRCFV- 361 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 D + + +E R + ++ ++V D + I+ N AF +M GY +E G Sbjct: 362 FSTDLTEQKRAEESLRLAAMVYENSSEAILVTDADNLIIAVNPAFEQMTGYAAAEVLGKN 421 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 P + A L E + GE+ +I+ + D + Sbjct: 422 PRIFKSGRHDRAFYHSMWL-ALDTEGYWHGEVWDKRKNGEEYIKLLTINVIRDDDGAIYR 480 Query: 241 LVMTFSDITEERQIR-----QLEGNILAAMCSSPPFHEMGE 276 V F+DITE +++ Q + L + + FH+ E Sbjct: 481 HVALFTDITERKKVEELIWRQANYDSLTKLPNRQMFHDRLE 521 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 60/419 (14%), Positives = 131/419 (31%), Gaps = 51/419 (12%) Query: 15 FPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIR 74 ++ + + +++ N A E+ WG + + G + P + E R Sbjct: 10 QDIVDSIPAATFIKDAGGRIVYMNHACEEQWGITFDVLGGTDGSQFFPPEQIERFREKDR 69 Query: 75 HNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK-VYYLALVRDASVEMAQKE 133 GGK ++E + + K+ + AEGK ++ + + D + + Sbjct: 70 EVIAGGK-QIEYEAPFWNAKLKENRIGF-FIKNPTFDAEGKLLFLVCITFDVTEDKKAAA 127 Query: 134 QTRQLIIAVDHLDRPVIVLDP-ERHIVQCNRAFTEMFGYCISEASGMQPDTL-LNIPEFP 191 R V++ ++++ + I NR F +FGY E G + + Sbjct: 128 ALRLQSQIVENAVEGIVLIKASDSTIQYTNRQFETLFGYAPGELIGKHISIINAPGNKSQ 187 Query: 192 ADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEE 251 + + + L K E + G I + S + DIT+ Sbjct: 188 METAQEINRQLEKEGVWSGEVFNRRKDGTTINTFLNASSFQHPELG-DLWIGYQRDITKR 246 Query: 252 RQIR----QLEGNILAAMCSSPPFHEMGEIICRNIE------SVLNESHVSLFA-----L 296 + + E AA+ ++ + ++ R +E + S L L Sbjct: 247 KLTEAVMLEKESQYRAAIDTAADGFWLVDMQGRLLEVNDAYARLSGYSREELIGMSIPEL 306 Query: 297 RNGMPIHWASSSHGAEIQNAQ--SWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADI 354 + I+N + +++DG+ + T S D+ Sbjct: 307 DAIDNSELVRARIEEIIRNGGYLEFDTMHKRKDGSLWPVHISTTYSSVSGGRCFVFSTDL 366 Query: 355 SQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVDH 413 + EQ+++ + + L +V + S + + D+ Sbjct: 367 T--------EQKRAEESL--------------------RLAAMVYENSSEAILVTDADN 397 Score = 77.0 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 82/257 (31%), Gaps = 20/257 (7%) Query: 133 EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPA 192 + +Q+ VD + + D IV N A E +G + G + PE Sbjct: 4 QLNKQVQDIVDSIPAATFIKDAGGRIVYMNHACEEQWGITF-DVLGGTDGSQFFPPEQIE 62 Query: 193 DNRIRLQQLLWKTARDQDEF-LLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEE 251 R + ++++ + + E + E +P +D L LV D+TE+ Sbjct: 63 RFREKDREVIAGGKQIEYEAPFWNAKLKENRIGFFIKNPTFDAEGKLLFLVCITFDVTED 122 Query: 252 RQIRQLEG-------NILAAMCSSPPFHEMGEIICRNIESVLNES-------HVSLFALR 297 ++ N + + + R E++ + H+S+ Sbjct: 123 KKAAAALRLQSQIVENAVEGIVLIKASDSTIQYTNRQFETLFGYAPGELIGKHISIINAP 182 Query: 298 NGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGIL--QIKTSSGAETSAFIERVAD 353 + +++ WS + R++DG +I D Sbjct: 183 GNKSQMETAQEINRQLEKEGVWSGEVFNRRKDGTTINTFLNASSFQHPELGDLWIGYQRD 242 Query: 354 ISQHMAALALEQEKSRQ 370 I++ A+ EK Q Sbjct: 243 ITKRKLTEAVMLEKESQ 259 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 789 bits (2038), Expect = 0.0, Method: Composition-based stats. Identities = 197/703 (28%), Positives = 326/703 (46%), Gaps = 42/703 (5%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 L+ + A + D + V D V N A+ ++ G + + G Sbjct: 124 LIERKTTRQALTLSEARFRAMSDASPLGIFVSDIHGECVYTNAAYHKISGLNLEQTLGTN 183 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 ++ P+ + + A Q E L G +W + + + + D L HL+ Sbjct: 184 WSMAIH-PDDRQRVLLEWRAAALGEATFQTEARFLRADGSIVWARLNAAAMLDGL-HLRG 241 Query: 241 LVMTFSDITEER--------QIRQLEGNILAAMCSSPPFHEMGEIICRNI---------- 282 V T DI+E + + + + + + + + G++ N+ Sbjct: 242 HVQTVEDISERKITEDALFEEKERAQVTLNSIGDAVLTTNLKGDVTYLNLVAEMMTGWPR 301 Query: 283 ESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSW----SATIRQRDGAPAGI---LQ 335 E+ + + +F + NG A + I+ ++ + + RDG A I Sbjct: 302 EAAIGQPLSEVFRILNGTTREVAPNPAQLAIRENRTVGLAADSILIHRDGLEAAIEDSAA 361 Query: 336 IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLD 395 + + + + D+S+ A + L Q D +TGLPNR L L Sbjct: 362 PIHNRDGQVAGAVIVFHDVSESRAMAL--------KMAHLAQHDFLTGLPNRALLTERLS 413 Query: 396 DLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIE 451 + +A + + +D+ + + DSLG+A DQ L +V R ++ +CR Sbjct: 414 RAIGQARRHNKRVGMLFLDLDYFKHINDSLGHAVGDQLLQQVAERLIVCIRDTDTVCRQG 473 Query: 452 GTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYL 508 G +FV++ E + IA++L ++P +I ++LSIGIS D G + D + Sbjct: 474 GDEFVILLAEIEQARDAAPIAEKLLAAFAEPCLIAGNELHVSLSIGISIYPDDGMDADTV 533 Query: 509 LSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAE 568 + A AM + + NG N +QFF+ MN RL + L+ A+ + L YQP+I Sbjct: 534 MKNADTAMYHAKANGRNNYQFFTTEMNTRAVRRLFIEGNLRRALRQGEFMLYYQPKIDLA 593 Query: 569 TGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIH 628 +G + G EAL RW DP HG V P +F+P+AEE G I IG WV+ EACRQ+ W+ + Sbjct: 594 SGMMIGSEALIRWQDPEHGLVYPKQFVPIAEESGLIVPIGSWVLREACRQVRAWQESGLV 653 Query: 629 IPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILR 688 +SVN+SA+ FR V+ + G+ L +E+TES++M ++ L+ Sbjct: 654 AVPVSVNISAVEFRHKDFLEGVALILKETGMLPSYLELELTESILMHDAESSATVLEALK 713 Query: 689 DMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLN 748 MG+ L++DDFGTG+S LS L P+ +KID+SFV + +++ A+ +G++L Sbjct: 714 TMGMQLAIDDFGTGYSSLSYLKRFPINTLKIDQSFVHDIAIDPDDASIVGAMIGMGKNLK 773 Query: 749 LTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 VVAEGVET+EQ LR +HC QG+ F RPLPA+E + Sbjct: 774 QRVVAEGVETEEQLAFLRTLHCDEGQGFLFGRPLPADEFARLL 816 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 98/268 (36%), Gaps = 13/268 (4%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A ++ F + + +G + + + E ++ N A K+ G E+ +G N M I D Sbjct: 133 ALTLSEARFRAMSDASPLGIFVSDIHGECVYTNAAYHKISGLNLEQTLGTNWSMAIHPDD 192 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV-YYLALVRD 124 R + R E + + DGS +W R + + + ++ V D Sbjct: 193 RQ---RVLLEWRAAALGEA-TFQTEARFLRADGSIVWARLNAAAMLDGLHLRGHVQTVED 248 Query: 125 ASVEM----AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 S A E+ + + ++ + V+ + + + N M G+ A G Sbjct: 249 ISERKITEDALFEEKERAQVTLNSIGDAVLTTNLKGDVTYLNLVAEMMTGWPREAAIGQP 308 Query: 181 PDTLLNIPEFPADNRIRLQQLLW----KTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 + I L +T + +L+ R G + I+ S +P+++ Sbjct: 309 LSEVFRILNGTTREVAPNPAQLAIRENRTVGLAADSILIHRDGLEAAIEDSAAPIHNRDG 368 Query: 237 HLQNLVMTFSDITEERQIRQLEGNILAA 264 + V+ F D++E R + ++ Sbjct: 369 QVAGAVIVFHDVSESRAMALKMAHLAQH 396 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 46/140 (32%), Gaps = 5/140 (3%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 DA L + N +V + N AE + G+ RE IG + + R Sbjct: 257 DALFEEKERAQVTLNSIGDAVLTTNLKGDVTYLNLVAEMMTGWPREAAIGQPLSEVF-RI 315 Query: 65 LRPAHPEYIRHNREGG--KARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYYLA 120 L E + + + R G++ + L +DG + + + + + Sbjct: 316 LNGTTREVAPNPAQLAIRENRTVGLAADSILIHRDGLEAAIEDSAAPIHNRDGQVAGAVI 375 Query: 121 LVRDASVEMAQKEQTRQLII 140 + D S A + L Sbjct: 376 VFHDVSESRAMALKMAHLAQ 395 >UniRef50_C6C676 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Dickeya dadantii Ech703 RepID=C6C676_DICDC Length = 861 Score = 788 bits (2037), Expect = 0.0, Method: Composition-based stats. Identities = 306/837 (36%), Positives = 488/837 (58%), Gaps = 57/837 (6%) Query: 10 ADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAH 69 ++ + ALEQ+++ VLIN+ V+ FN AAE LWGY+R+E+ G + L+ RPA+ Sbjct: 9 SEQVLLSALEQSIVAVVLINDAGCVLLFNRAAEILWGYERQEMRGRPVVSLLAPVCRPAY 68 Query: 70 PEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEM 129 + IR N+ A + E LE+KDG + W R LSKV G+ Y + + D S+++ Sbjct: 69 LDAIRSNQADSTAGAKTKC-EWLLERKDGGQFWGRLPLSKVEVNGRTYRMLMAWDVSLDV 127 Query: 130 AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE 189 + Q R ++A+D+ +RPV++LD +++ N +F+ ++GY + + G D +++ Sbjct: 128 EARWQNRLTMLAIDNAERPVVLLDNACRVIRVNYSFSRLYGYALEDIVGNTLDGIMSYSL 187 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH--LQNLVMTFSD 247 D+ + ++W +R Q E + R G + + + + SP+ D + SD Sbjct: 188 DSQDSAGKKMSVMWGRSRVQAEVAIRCRDGREAFGRMASSPLIDDENDEFYGYSINVISD 247 Query: 248 ITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALR-NGMPIHWAS 306 ITEE+Q R LE +IL A+ SS F E+G+ IC+ + ++ + S+ + G+ HW++ Sbjct: 248 ITEEQQFRSLERDILGALVSSLSFAELGDYICQQVSEIVPDVIPSIMTVDHRGILRHWSA 307 Query: 307 --------------------SSHGAEIQNAQ---------------------------SW 319 S G + W Sbjct: 308 PQLPDAYNQQVSGMAIGDGVGSCGTAAWRGEPVVAADIEHDASWAMFSQIPLAYGLRACW 367 Query: 320 SATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFD 379 S IR+RD + AG + + + + F ER+ D H+ +LA+EQE++RQ + QL+Q+D Sbjct: 368 SYPIRRRDRSVAGTVAFYSRELRQPTLFHERIIDACTHLCSLAIEQEENRQRMVQLVQYD 427 Query: 380 PMTGLPNRNNLHNYLDDLVDK--AVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRF 437 P+TGLPN+ +L YLDD++ + ++ +G+D +D+ ++ G+A D+ L+ V +R Sbjct: 428 PLTGLPNQYHLQRYLDDILSQQPTREVTLFSVGLDRFKDINEAFGHAAGDRVLVAVTHRL 487 Query: 438 REKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGI 497 + L+ ++L R EG +FV+V+ + + + ++LR +S+P+ +D L+ S+GI Sbjct: 488 QAFLRAGEWLSRPEGDRFVIVAPDCSAHRASLMTEQLRETISQPVELDGHRLSLSASVGI 547 Query: 498 S--YDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNN 555 S + G NR+ LL A AM ++ GG G+QFFS MN ERL+LG ALK AI+N Sbjct: 548 SHYLEGGSNRETLLDNAKVAMYRAKEAGG-GYQFFSADMNVAASERLLLGGALKRAINNG 606 Query: 556 QLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEA 615 +L+L YQPQI ++GELYG+EALARW+DP+ G+VP S+FI LAE+IGEIE + W + EA Sbjct: 607 ELELYYQPQIRLDSGELYGMEALARWYDPVFGNVPTSKFIALAEDIGEIEALSYWALCEA 666 Query: 616 CRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMME 675 CRQL+ W +P +SVN S L F LP ++ + ++ + G +LT+EITES M Sbjct: 667 CRQLSLWDLAGARVPVVSVNFSPLCFHR-DLPETITTILQSFSLTGERLTIEITESAAMA 725 Query: 676 HDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILA 735 ++ + +R G+G+S+DDFGTGFS LS LV+LPVTE+KID+SF+D+C +E+R+ A Sbjct: 726 LTPDMLAVVHRIRGNGIGVSIDDFGTGFSNLSNLVNLPVTEVKIDRSFIDKCESEERLQA 785 Query: 736 LLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 L+EA+ IG+SL L VVAEGVET+ Q ++ K+ R+ QGY F+RP+ A ++PGW+ Sbjct: 786 LVEAVVGIGRSLKLEVVAEGVETEGQSALIGKLGGRIAQGYLFARPMKASDVPGWLQ 842 Score = 74.7 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 99/269 (36%), Gaps = 39/269 (14%) Query: 126 SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 + + + L+ A++ V++++ ++ NRA ++GY E G +LL Sbjct: 1 MEYLTIPDSEQVLLSALEQSIVAVVLINDAGCVLLFNRAAEILWGYERQEMRGRPVVSLL 60 Query: 186 NIPEFPADNRIRLQQLLWKT--ARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVM 243 PA T A+ + E+LL + G + W + +S V + ++ Sbjct: 61 APVCRPAYLDAIRSNQADSTAGAKTKCEWLLERKDGGQFWGRLPLSKV--EVNGRTYRML 118 Query: 244 TFSDITEERQIRQLEGNILAAMCSSPP----------------------FHEMGEIICRN 281 D++ + + R + A+ ++ + + +I+ Sbjct: 119 MAWDVSLDVEARWQNRLTMLAIDNAERPVVLLDNACRVIRVNYSFSRLYGYALEDIVGNT 178 Query: 282 IESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPA----GILQIK 337 ++ +++ S S + M + W S AE+ IR RDG A + Sbjct: 179 LDGIMSYSLDSQDSAGKKMSVMWGRSRVQAEVA--------IRCRDGREAFGRMASSPLI 230 Query: 338 TSSGAETSAF-IERVADISQHMAALALEQ 365 E + I ++DI++ +LE+ Sbjct: 231 DDENDEFYGYSINVISDITEEQQFRSLER 259 >UniRef50_Q4C8S6 PAS:GGDEF n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C8S6_CROWT Length = 906 Score = 788 bits (2037), Expect = 0.0, Method: Composition-based stats. Identities = 200/824 (24%), Positives = 378/824 (45%), Gaps = 55/824 (6%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP 67 N+ + + AL+ + G+ + E +F++ E++WG + G + + Sbjct: 99 NSRENHYAQALKFSQTGSWEFDVVTEKVFWSEEVERIWGMEPGTFRGE-----LQQVQGA 153 Query: 68 AHPEYIRHNR---EGGKARVEGMSRELQLEKKDGSKIWTR--FALSKVSAEGKVYYLALV 122 HPE + H + + + + + E ++ D S W + + K + L +V Sbjct: 154 IHPEDVEHWQKNVQDCREKGKEHRIEYRIIHPDASIHWVQALGSAEKDDQGNVIRLLGIV 213 Query: 123 RDASV-----------EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY 171 D + EMA +E DH V V D + ++++ + G Sbjct: 214 MDITERKQLELEHKETEMALRESEALFRNMADHAPVMVWVTDETGYSTYVSQSWYDFSGQ 273 Query: 172 CISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV 231 A G +++ P+ R R + K ++ R G W + P Sbjct: 274 KEGTALGFGWLDVIH-PDERELARKRFLEFNEKRQPFSIDYRFRRRDGVYCWGIDAGKPR 332 Query: 232 YDVLAHLQNLVMTFSDITEERQIRQL----------EGNILAAMCSSPPFHEMGEIICRN 281 + + + + DI++ +++ + +++A + + + + + RN Sbjct: 333 FSADGQFKGYIGSVMDISDRKRMEEQLRIFECIVATTQDMMALIDQNYTYQIVNDAYARN 392 Query: 282 I----ESVLNESHVSLFA--LRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQ 335 E ++ +S V + + + H G E+ ++W ++ A Sbjct: 393 FQRAKEEIIGKSVVEIVGEEFMDTIQPHLDRCLQGEEV-RYETWFDLGEEQRYYHALYSP 451 Query: 336 IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLD 395 + ++ TSA + + DI+Q ++S Q + D +T LPNR ++ L+ Sbjct: 452 YREANKGVTSAVVN-IHDITQI--------KESEQKLYYQAHHDTLTNLPNRMLMNTRLE 502 Query: 396 DLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIE 451 + +A V I +D +++ DSLG+ D L ++ R ++ + + RI Sbjct: 503 QSIQQATRKGDKLAVVFIDLDRFKNINDSLGHRAGDSLLEQLAQRLCQQRRKSDTVARIS 562 Query: 452 GTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYL 508 G +FV++ + D + + +L +P +I+ + +T S+G+S D G + L Sbjct: 563 GDEFVVILEDIKDTQHAGMVVGKLMRTFEEPFIIEGRTIKMTSSMGLSLFPDDGTDVATL 622 Query: 509 LSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAE 568 L A AM +++G N + F+ M V E ++L AL+EA+ + L+YQPQI Sbjct: 623 LRNADAAMYRAKEDGRNTYCFYRKEMTSTVFEYMLLENALREALKKKEFYLLYQPQIEML 682 Query: 569 TGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIH 628 + GIEAL RWH P G V P++FIP+AE+ G I+ IG WV+ ACRQ W Q + Sbjct: 683 SHRCLGIEALLRWHHPELGVVSPAQFIPIAEQSGLIQEIGTWVLTTACRQAKIWLEQKLD 742 Query: 629 IPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILR 688 ++VN++A + V + + G+ L +E+TE ++M+ + K+++ L+ Sbjct: 743 FGRIAVNVAAPQIQHGDFIQVVENVLKTTGLPAAYLELELTEGLLMKQTEQNIKQLEKLQ 802 Query: 689 DMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLN 748 MG+ L++DDFG G+S L+ L LP+ ++KID+SF+ + A+ +A+ ++G +LN Sbjct: 803 GMGIKLTIDDFGIGYSSLNYLKRLPIDKLKIDQSFIRDLPHDTNDTAISQAVIALGYALN 862 Query: 749 LTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 L ++AEGVE +EQ L++ C QGYFFS+P+P +++ + Sbjct: 863 LQIIAEGVENEEQAAFLKEKGCHQAQGYFFSQPIPPQQVSALFA 906 Score = 100 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 88/254 (34%), Gaps = 9/254 (3%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A ++ +F + + + +E + + + G K +G +I D Sbjct: 232 ALRESEALFRNMADHAPVMVWVTDETGYSTYVSQSWYDFSGQKEGTALGFGWLDVIHPDE 291 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIW-TRFALSKVSAEGK-VYYLALVR 123 R E R + + S + + ++DG W + SA+G+ Y+ V Sbjct: 292 R----ELARKRFLEFNEKRQPFSIDYRFRRRDGVYCWGIDAGKPRFSADGQFKGYIGSVM 347 Query: 124 DASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDT 183 D S +EQ R V + ++D N A+ F E G Sbjct: 348 DISDRKRMEEQLRIFECIVATTQDMMALIDQNYTYQIVNDAYARNFQRAKEEIIGKSVVE 407 Query: 184 LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVM 243 ++ EF + L + L + + L E+ + A SP + + + V+ Sbjct: 408 IV-GEEFMDTIQPHLDRCLQGEEVRYETWFDLGE--EQRYYHALYSPYREANKGVTSAVV 464 Query: 244 TFSDITEERQIRQL 257 DIT+ ++ Q Sbjct: 465 NIHDITQIKESEQK 478 >UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XRM5_DESMR Length = 821 Score = 788 bits (2035), Expect = 0.0, Method: Composition-based stats. Identities = 210/824 (25%), Positives = 361/824 (43%), Gaps = 61/824 (7%) Query: 3 LTDADNA-ADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 +TD+ A + ++ E + A++ + + V+ N + E L+G EV+G ++ ++ Sbjct: 1 MTDSSAALPEDVYRRIFESSPNAALVRDASGVVLAVNASFEALFGLDAAEVVGRDLRQVV 60 Query: 62 PRDLRPAHPEYIRHNREGGKARVEG--MSRELQLEKKDGSKI---WTRFALSKVSAEGKV 116 GG + G SR + DG + +F +V +GK Sbjct: 61 RPADDGETA--------GGDWSLGGAAFSRRTRWTAGDGVTVDACPCQFPAGQV--DGKP 110 Query: 117 YYLALVRDASVEMAQKEQT----RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYC 172 + RD S +EQ R+ ++ + P ++ NR ++G+ Sbjct: 111 VSCVIFRDISGRRRAEEQLDAAERKYRAIFENAVEGIFQTTPGGRYLEVNRTLARIYGFD 170 Query: 173 ISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQD-EFLLLTRTGEKIWIKASISPV 231 + + N R + L + ++ E + + G IWI + V Sbjct: 171 SVDEMTEHFRDIKNQLYVEPKRRDDFVRELSAHDQVRNFESAIHKKDGSVIWISENARVV 230 Query: 232 YDVLAHLQNLVMTFSDITEERQIRQL---EGNILAAMCSSPPFHEMGEIICRNIESVLNE 288 D + T DIT+ ++ + + + ++ P + RNI V N Sbjct: 231 RDADGAVAYYEGTVVDITDRKRAEEQLAAQRAYFDQLFANSPQAIALIDMRRNIVDV-NH 289 Query: 289 SHVSLFALRNGMPIHW--------------ASSSHGAEIQNAQSWSATIR-QRDGA--PA 331 + LF + + S+ GA + T R RDG P Sbjct: 290 AFEDLFGFKAAEIKGYGMRAYIVPKHLLGECESTRGAILSGKPMVRETFRQHRDGRLIPV 349 Query: 332 GILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLH 391 ++ G + + DIS E++ + I D +TGLPNR+ Sbjct: 350 SMIGFPIEFGGQPQGIVYIYQDIS--------ERKAFEEQITHQAFHDALTGLPNRSLFA 401 Query: 392 NYLDDLVDKAVS-----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQY 446 + LD + +A V +I ++ + + D+LG+ DQ L+EV R ++ Sbjct: 402 DRLDRALTRARRRGDYQYAVLMIDLNKFKGINDTLGHQAGDQLLVEVSRRLMACVRSMDT 461 Query: 447 LCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGK 503 + R+ G +F ++ E + + D + + KP M+ S+GI + Sbjct: 462 VARLGGDEFAVILEELKSKKEVMAVVDRIGAALGKPCMLCGTTVTPGASVGIVLRTRDYQ 521 Query: 504 NRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQP 563 + + +L A AM +++G F M++ + + + L A L+ A+ +L L YQP Sbjct: 522 SPEDILRDADIAMYRAKESGRPS-MIFDRRMHQEILDAINLEADLRAALDRGELLLHYQP 580 Query: 564 QIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWR 623 + +TG + G EAL RW P G VPP +FIPLAEE G I+ +GR+VIAEACRQL W+ Sbjct: 581 IVDVQTGRIEGFEALVRWDHPDRGLVPPVQFIPLAEETGLIQPLGRFVIAEACRQLRAWQ 640 Query: 624 SQ--NIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIF 681 + ++SVN+S F L + V+ + G+D L +EITES++M Sbjct: 641 LELPEAEQLSVSVNVSCHQFVKEGLVDHVAGVLETTGLDPACLKLEITESVLMHDAQHTA 700 Query: 682 KRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAIT 741 + L+ +GV +++DDFGTG+S LS L LP+ +KID+SF+ ++++I Sbjct: 701 GELSRLKALGVKIAIDDFGTGYSSLSYLRQLPIDHLKIDRSFISGDDVNGESQEIVKSII 760 Query: 742 SIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAE 785 ++ +SL LTV+AEGVE ++Q + LR C QG+ FSRP+ + Sbjct: 761 ALARSLGLTVIAEGVEHQDQLDKLRNADCDKAQGFMFSRPVDKD 804 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 786 bits (2032), Expect = 0.0, Method: Composition-based stats. Identities = 195/688 (28%), Positives = 319/688 (46%), Gaps = 33/688 (4%) Query: 130 AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE 189 + R+L AV+ V + D + I N +F + GY +EA G P L+ Sbjct: 140 QTEHLVRRLSQAVEQAADSVFITDRQGTIQYVNPSFERLTGYSAAEAIGRTP-ALIKSDR 198 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 +L + Q+ + + G + + +I+P++D + V T D+T Sbjct: 199 HDDAFFHKLWDTILAGRIFQETLVNRRKDGGLFYEEKTIAPLFDEGRGIAGFVSTGRDVT 258 Query: 250 EERQIRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNESHVSLFALRNGMPIH 303 + + Q G +L + ++ F + E + R +VL + + R+ H Sbjct: 259 DRIRDEQTRGQLLEILEATTDFVAIIEGDGRLRYLNRAGRAVLGLTATEDVSSRHIAQCH 318 Query: 304 WASSSHG------AEIQNAQSWSATI--RQRDGAPAGILQIKTSSGA---ETSAFIERVA 352 ++H + +W I R DG + Q+ + G F Sbjct: 319 PEWATHRLLMEAFPTARRDGAWQGEIAARLADGREIPVSQVVLAHGGANEMPEFFSTIAR 378 Query: 353 DISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYL 408 DI+ E++ Q + + D +TGLPNR L + ++ +V + V Sbjct: 379 DIT--------ERKHFEQELRRQATHDALTGLPNRILLEDQIEAVVAHSARSHKLASVLF 430 Query: 409 IGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNI 467 + +D+ + + +SLG+A D L R R+ ++P + R G +F +V + + V NI Sbjct: 431 LDIDNFKRINESLGHAAGDAMLRHAAQRLRDCVRPTDVVARYGGDEFTIVLGDLSHVDNI 490 Query: 468 TQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGN 525 I ++R P++I + + S+G+S G + LL A AM + +G N Sbjct: 491 PAILHKVRAAFETPLVISGQEVYASFSVGVSVYPHDGDDGATLLKNADTAMYRSKASGRN 550 Query: 526 GWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPL 585 +QF++P MN +E L L L+ A+ + +L YQPQ+ + G+EAL RW P Sbjct: 551 RYQFYAPEMNARGQELLSLETDLRRALDRGEFRLHYQPQLDLRDNRIAGVEALLRWKHPR 610 Query: 586 HGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQ 645 G + P F+PL E+ G I +G WV+ AC Q R + +SVN+SA FR + Sbjct: 611 DGVIAPGDFVPLLEDTGLIVPVGEWVLRNACTQYRACRESGVAPVRISVNVSARQFREDT 670 Query: 646 LPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSG 705 L QV + + H L +EITES M+ + L +GV L++DDFGTG+S Sbjct: 671 LLRQVEQVLREECMPPHHLELEITESTAMQDVAATGDILAALDALGVRLAIDDFGTGYSS 730 Query: 706 LSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEML 765 L+ L P+ +KID++F+ + I A+ EA S+G L L VVAEGVET EQ L Sbjct: 731 LAYLKRFPLDALKIDQAFIRDAPRDANIAAIAEASISLGHKLGLEVVAEGVETAEQLAFL 790 Query: 766 RKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 R+ C +IQG+ FSRPLPA+ + +++ Sbjct: 791 RRRACDLIQGFHFSRPLPADALTPFLAR 818 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 39/249 (15%), Positives = 81/249 (32%), Gaps = 6/249 (2%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 A+EQ + + + + NP+ E+L GY E IG ++ H + Sbjct: 148 LSQAVEQAADSVFITDRQGTIQYVNPSFERLTGYSAAEAIGRTPALIKSDR----HDDAF 203 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRDASVEMAQ 131 H L +KDG + ++ + EG+ +++ RD + + Sbjct: 204 FHKLWDTILAGRIFQETLVNRRKDGGLFYEEKTIAPLFDEGRGIAGFVSTGRDVTDRIRD 263 Query: 132 KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFP 191 ++ QL+ ++ V +++ + + NRA + G +E + + Sbjct: 264 EQTRGQLLEILEATTDFVAIIEGDGRLRYLNRAGRAVLGLTATEDVSSRHIAQCHPEWAT 323 Query: 192 ADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEE 251 + + Q E G +I + + + DITE Sbjct: 324 HRLLMEAFPTARRDGAWQGEIAARLADGREIPVSQVVLAHGGANEMPEFFSTIARDITER 383 Query: 252 RQIRQLEGN 260 + Q Sbjct: 384 KHFEQELRR 392 Score = 50.4 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 15/155 (9%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 D G LE +I + + + N A + G E + R + Sbjct: 263 DEQTRGQLLEILEATTDFVAIIEGDGRLRYLNRAGRAVLGLTATE-------DVSSRHIA 315 Query: 67 PAHPEYIRHNREGGK---ARVEG-MSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLA 120 HPE+ H AR +G E+ DG +I + ++ ++ Sbjct: 316 QCHPEWATHRLLMEAFPTARRDGAWQGEIAARLADGREIPVSQVVLAHGGANEMPEFFST 375 Query: 121 LVRDASVEMAQKEQTRQLII--AVDHLDRPVIVLD 153 + RD + +++ R+ A+ L +++ D Sbjct: 376 IARDITERKHFEQELRRQATHDALTGLPNRILLED 410 >UniRef50_B8G9I9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Chloroflexus RepID=B8G9I9_CHLAD Length = 1101 Score = 786 bits (2031), Expect = 0.0, Method: Composition-based stats. Identities = 226/825 (27%), Positives = 366/825 (44%), Gaps = 63/825 (7%) Query: 16 PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRH 75 L Q ++ + + +++ N A L+ + E +IG + L + P P Sbjct: 272 RVLSQINEAVIVTDRSGAIIYLNEMAAYLYAVQPEAIIGQPLSRLFTAEPLPYQPV---- 327 Query: 76 NREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAE--GKVYYLALVRDASVEMAQKE 133 + ++ G EL DG + + + + L +VRD + +E Sbjct: 328 -QPSVQSFSTGWRGELIHRLPDGRAMMVEVRIDPLYHDELANGGALIVVRDITARKQAEE 386 Query: 134 QTRQLIIAVDHLDRPVIVLDPER------HIVQCNRAFTEMFGYCISEASGMQPDTLLNI 187 + R L V H + VI+LD E I N A +++ GY +E G +L+ Sbjct: 387 RLRLLESVVVHTNDAVIILDAEPLHAPGPFIRYANAACSQLTGYATNELIGRSL-RILHG 445 Query: 188 PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSD 247 P + RL + + + + L TR G+ IW+ S+SPV D + + D Sbjct: 446 PATDSVTLNRLWEAMERQQPARFALLYYTRAGKPIWVDLSLSPVTDEYGKATHFIALHRD 505 Query: 248 ITEERQIRQLEGN---ILAAMCSSPPFHEMGEIICRNIES-------------------- 284 I+ ++ LE + ILA + P M + IE Sbjct: 506 ISAQKLAAFLEHDRSAILALLLQHAPVTAMLNRLVTLIERQRPNWLVWAELDGHPAAASK 565 Query: 285 -------VLNESHVSLFALRNGM-PIHWASSSHGAEIQN---AQSWSATIRQRDGAPAGI 333 ++ + A N PI +H ++++ + W + + GA Sbjct: 566 PLAGEADLIGPRLRQMIARHNQKAPIVLDLHTHWDQLRHLSVSSGWIWPLAKAHGA---- 621 Query: 334 LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNY 393 L I S + + ++ + L + + +++D +TGLPNRN L Sbjct: 622 LAIFHQQTDWVSESDQMLLRVATELFNLIADHANLNAQLNYQVRYDTLTGLPNRNLLQER 681 Query: 394 LDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCR 449 +D + A + I +D + V DSLG+ D+ L V F +P L R Sbjct: 682 IDLALRDARERRHIVALLFIDLDGFKQVNDSLGHPIGDRFLKHVSQAFAACARPQDTLGR 741 Query: 450 IEGTQFVLVSLENDVSNITQIA-DELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRD 506 + G +F+L+ + + + IA L + + P + D LT SIGIS G + Sbjct: 742 MGGDEFLLLMPDLPDARLADIAAQRLLDALQTPFLHDGHELRLTASIGISLFPRDGVDVV 801 Query: 507 YLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIF 566 LL A +AM ++ +G+ + P + RL L A L+ A+ ++L + YQPQ Sbjct: 802 TLLKNADSAMHRAKELKRSGFLHYRPEHSRRAHTRLALEAQLRRALERHELAVYYQPQYD 861 Query: 567 AETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN 626 + + G+EAL RWH P G + P F+P+AEE I IG WV+ EACRQ W+ Sbjct: 862 LVSEGITGVEALVRWHHPQRGPIAPGEFVPIAEESDLIIEIGSWVLREACRQAMAWQQAG 921 Query: 627 IHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQI 686 + +SVN+SA + +V+ +HA G+ L +EITE +M++ ++I Sbjct: 922 YPLLRISVNVSARQLLRPEFVAEVAAVLHATGLPAQYLELEITEGVMLDDPIYAARQIDQ 981 Query: 687 LRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEK----RILALLEAITS 742 LR MGV +++DDFGTG+S L+ L L + +KID++FV ++ ALL AI + Sbjct: 982 LRHMGVRIALDDFGTGYSSLAYLRQLRLDALKIDQAFVRAIDEQQNVVTNSRALLRAIIN 1041 Query: 743 IGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 + SL L VVAEGVET EQ L + C V+QGY S+PLPA+E+ Sbjct: 1042 LAHSLGLAVVAEGVETDEQRAALLSMGCDVLQGYLISQPLPADEV 1086 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 63/415 (15%), Positives = 126/415 (30%), Gaps = 49/415 (11%) Query: 6 ADNAADGIFFPALEQNMMGAVL-INENDEVMFFNPAAEKLWGYK-REEVIGNNIDMLIPR 63 A + + LE + ++ + + NPA +++G E + + + Sbjct: 140 ALRNNEFRYRQLLELAPLLIIISTLPEGIIRYCNPAGARIFGVDDPAEPVNQPLTEFLSG 199 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVR 123 + + +R R+ + + +D + + G++ L + Sbjct: 200 EDH----DLMRKRRQALRNGQLLQPARYHIYARDQIVRVIEVQGTLIEGPGEIQVLTIGY 255 Query: 124 DASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDT 183 D + + + Q + ++ VIV D I+ N ++ G Sbjct: 256 DVTDRVEAERQLNLRARVLSQINEAVIVTDRSGAIIYLNEMAAYLYAVQPEAIIGQPLSR 315 Query: 184 LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVM 243 L P Q + + E + G + ++ I P+Y ++ Sbjct: 316 LFTAEPLPYQPVQPSVQSF--STGWRGELIHRLPDGRAMMVEVRIDPLYHDELANGGALI 373 Query: 244 TFSDITEERQIRQLEG----------------------------NILAAMCSSPPFHEMG 275 DIT +Q + A CS + Sbjct: 374 VVRDITARKQAEERLRLLESVVVHTNDAVIILDAEPLHAPGPFIRYANAACSQLTGYATN 433 Query: 276 EIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGI-- 333 E+I R++ + + S+ E Q ++ R G P + Sbjct: 434 ELIGRSLRILHGPATDSVT---------LNRLWEAMERQQPARFALLYYTRAGKPIWVDL 484 Query: 334 -LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNR 387 L T + + FI DIS A LE ++S + L+Q P+T + NR Sbjct: 485 SLSPVTDEYGKATHFIALHRDISAQKLAAFLEHDRS-AILALLLQHAPVTAMLNR 538 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 782 bits (2021), Expect = 0.0, Method: Composition-based stats. Identities = 200/843 (23%), Positives = 358/843 (42%), Gaps = 77/843 (9%) Query: 17 ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHN 76 AL N +++ + +++ +N KL+G+ E IG + L H E R Sbjct: 248 ALMANSSVGIVVTHDRKIVRYNQRFGKLFGFPGENGIGMDTAGLY--RSAEEHTELNRRA 305 Query: 77 REGGKARVEGMSRELQLEKKDGSKIWTRFA-LSKVSAEGKVYYLALVRDASVEMAQKEQT 135 + + EL + ++DGS IW + + + D + +E+ Sbjct: 306 APAL-FQAKPFQTELYMRRQDGSDIWVNLIGYVADPTDPSMGVFWIAEDRTAFKQAEEEL 364 Query: 136 RQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFP 191 ++ + D+ + + R QCNR F E++GY E +G + Sbjct: 365 KKAYFDQRLIFDNCVAGIAFV-RNRVFQQCNRRFEELYGYGPGELTGKPTRVTYFSDKAH 423 Query: 192 ADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEE 251 A+ ++L + E + + G+ IW++ + + D + + DIT Sbjct: 424 AEIGTTAYEMLGRGETFVSEVVHRRQNGDPIWMRITGRAI-DPANPNDGSIWNYEDITSR 482 Query: 252 R----------QIRQLEGNILAAMCSSPPFH--------EMGEIICRNIESVLNESHVSL 293 + +++ N M S +++ +L + V Sbjct: 483 KVAEDSLRESVMLQRAILNSAKLMILSTDSEGRVISCNPATEQMLAYPSAELLGRTPVEC 542 Query: 294 FALRNGMPIHWASSSHGA---------------EIQNAQSWSATIRQRDGAPAGI---LQ 335 F LR + + S + + T +++DG + + Sbjct: 543 FFLREEIQERRRALSSETGFDPASDIDVLLARVRLGSVDQGQWTFQRKDGEKFIVELSIS 602 Query: 336 IKTSSGAETSAFIERVADISQH------------------------MAALALEQEKSRQH 371 + F+ +DI++ + + LE+ + Sbjct: 603 ALHPEDKKAQGFLFVASDITERKRAEDALLRSRDELELRVKERTSELESEVLERRRIESK 662 Query: 372 IEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWAD 427 + L D +TGL NR L L + +D A + I +D + + DSLG+ D Sbjct: 663 LRYLAHHDALTGLANRTLLQQRLGEAMDNAAQDDTKVAILFIDLDRFKTINDSLGHHIGD 722 Query: 428 QALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSN-ITQIADELRNVVSKPIMIDD 486 L V +R E L+ + + R+ G +F+++ ++A ++ + + PI ID Sbjct: 723 TLLKNVASRLTETLRSNDTIARLGGDEFMIILPLKANEALAGKLASKILDALRPPIRIDG 782 Query: 487 KPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVL 544 +T SIGI + + G + L+ A AM + NG N + +F+ MN + Sbjct: 783 HELFVTPSIGICFYPNDGVTVNALMRNADTAMYQAKANGRNTYCYFTAEMNAAADNYFQI 842 Query: 545 GAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEI 604 + L+ A+ N+ ++ YQP I +T + EAL RW P G V P++FI +AEE G I Sbjct: 843 ESDLRRAVDRNEFEVFYQPVIDLKTHRITSYEALVRWRHPTKGLVGPAQFITVAEESGLI 902 Query: 605 ENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQL 664 IG V+ +AC QL W + P L++NLS + F L + + + + ++ Sbjct: 903 GEIGTIVLRQACSQLRSWIDEGFTSPILALNLSPIQFNDPNLTEGICRILRDYDLTPDRI 962 Query: 665 TVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFV 724 +EITE+++M+ +Q L G LS+DDFGTG+S L+ L PV +KID+SF+ Sbjct: 963 ELEITETVIMQDGELALGTLQNLSSRGFRLSIDDFGTGYSSLAYLKRFPVDTLKIDRSFI 1022 Query: 725 DRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPA 784 + A++ AI ++ SL+L+V+AEGVETKEQ+++L ++C QGY+ ++P+PA Sbjct: 1023 TDMTANENDRAIVTAIMALANSLHLSVIAEGVETKEQYDLLSALNCNFAQGYYMAKPMPA 1082 Query: 785 EEI 787 E I Sbjct: 1083 EMI 1085 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 64/387 (16%), Positives = 137/387 (35%), Gaps = 42/387 (10%) Query: 18 LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNR 77 + +G + +N E++ +N +++G+ E+IG + L P D A E + Sbjct: 1 MNNAPVGILYT-KNGEILRYNAKFSEIFGFDT-EIIGKSARQLCPSD---AAYEALGEVA 55 Query: 78 EGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV-YYLALVRDASVEMAQK---- 132 + + +E+QL DG W + ++ D S + Sbjct: 56 GPILSAGKPFHQEIQLRHHDGHTFWADAVAYLFDPRHPAEGTIWIINDISERKQAERNLH 115 Query: 133 EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPA 192 E ++L ++ ++ + R +++CNR F E+ GY E GM L E Sbjct: 116 ETVQELQSIFNNASVGIVFTNR-RTVLRCNRRFEEIVGYASDELHGMPTANLYASAESHE 174 Query: 193 DNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER 252 + + LL + G IW + + D + +V +D+TE Sbjct: 175 ELGRQSSPLLSAGKAFSATKQFRRKDGHLIWCQVFAKAI-DPNDPSRGIVWIAADVTEAV 233 Query: 253 QIRQLEGNILAAMCSSPPFHEMGEIICRNIESV-LNESHVSLFALRNGMPIHWASS---- 307 R+ M + +G ++ + + V N+ LF I ++ Sbjct: 234 STREALEKSSREMEALMANSSVGIVVTHDRKIVRYNQRFGKLFGFPGENGIGMDTAGLYR 293 Query: 308 ----------SHGAEIQNAQSWSATI--RQRDGAPAGILQIKTSSGAETSAFIERVADIS 355 + A+ + + R++DG+ + I ++ D S Sbjct: 294 SAEEHTELNRRAAPALFQAKPFQTELYMRRQDGSDIWVNLI---------GYVADPTDPS 344 Query: 356 QHMAALALEQ---EKSRQHIEQLIQFD 379 + +A ++ +++ + +++ FD Sbjct: 345 MGVFWIAEDRTAFKQAEEELKK-AYFD 370 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 64/378 (16%), Positives = 125/378 (33%), Gaps = 32/378 (8%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 +G V N V+ N E++ GY +E+ G L +H E Sbjct: 121 LQSIFNNASVGIVFTNRR-TVLRCNRRFEEIVGYASDELHGMPTANLYASA--ESHEELG 177 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK-VYYLALVRDASVEMAQK 132 R + A + S Q +KDG IW + + + + D + ++ + Sbjct: 178 RQSSPLLSA-GKAFSATKQFRRKDGHLIWCQVFAKAIDPNDPSRGIVWIAADVTEAVSTR 236 Query: 133 EQT----RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 E R++ + + ++V +R IV+ N+ F ++FG+ GM L Sbjct: 237 EALEKSSREMEALMANSSVGIVVTH-DRKIVRYNQRFGKLFGFPGENGIGMDTAGLYRSA 295 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 E + R L++ Q E + + G IW+ I V D + D Sbjct: 296 EEHTELNRRAAPALFQAKPFQTELYMRRQDGSDIWVNL-IGYVADPTDPSMGVFWIAEDR 354 Query: 249 TEERQIRQ------LEGNILAAMCSSPPFHEMGEII---CRNIESVLNESHVSLFALRNG 299 T +Q + + ++ C + + R E + L Sbjct: 355 TAFKQAEEELKKAYFDQRLIFDNCVAGIAFVRNRVFQQCNRRFEELYGYGPGELTGKPTR 414 Query: 300 MPIHWASSSHGAE-------IQNAQSWSATI--RQRDGAPAG--ILQIKTSSGAETSAFI 348 + +++ +H + +++ + + R+++G P I I Sbjct: 415 VT-YFSDKAHAEIGTTAYEMLGRGETFVSEVVHRRQNGDPIWMRITGRAIDPANPNDGSI 473 Query: 349 ERVADISQHMAALALEQE 366 DI+ A +E Sbjct: 474 WNYEDITSRKVAEDSLRE 491 Score = 62.8 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 54/153 (35%), Gaps = 14/153 (9%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNID--MLIP 62 D+ + + L + + + V+ NPA E++ Y E++G + Sbjct: 487 DSLRESVMLQRAILNSAKLMILSTDSEGRVISCNPATEQMLAYPSAELLGRTPVECFFLR 546 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQL----------EKKDGSKIWTRFALSKVSA 112 +++ + ++ + ++L ++KDG K ++S + Sbjct: 547 EEIQERRRALSSETGFDPASDIDVLLARVRLGSVDQGQWTFQRKDGEKFIVELSISALHP 606 Query: 113 EGK--VYYLALVRDASVEMAQKEQTRQLIIAVD 143 E K +L + D + ++ + ++ Sbjct: 607 EDKKAQGFLFVASDITERKRAEDALLRSRDELE 639 >UniRef50_A1SU67 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Alteromonadales RepID=A1SU67_PSYIN Length = 1014 Score = 782 bits (2020), Expect = 0.0, Method: Composition-based stats. Identities = 211/829 (25%), Positives = 385/829 (46%), Gaps = 60/829 (7%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 TDA ++ +F + +G + + NP ++ GY+ EE++ N L Sbjct: 198 TDALKESEFLFRSQFDLGSIGIAITYPGKGWLRVNPRLCEILGYREEELLLLNWSELTHP 257 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYY-LALV 122 D R H + +++ + +G S + + +KDG ++ +S +G V + +A + Sbjct: 258 DDR--HLDLYQYD-QMLTGEEDGYSLDKRFIRKDGESVYVHMTISCYRVDGAVQFVIAGI 314 Query: 123 RDASVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 D+S +++ R QL+ + + + E + V N + EM GY + Sbjct: 315 LDSSERKHAEDKIRGRKEQLLSVLSGSELGFWDWNIEANTVHRNARWAEMLGYRFEDI-- 372 Query: 179 MQPDTLLNIPEFPADNRIRLQQLL-----WKTARDQDEFLLLTRTGEKIWIKASISPV-Y 232 Q DT +N+ ++ R+ Q + +TA+ + E+ + TR GE WI V Y Sbjct: 373 -QNDTSINLDSVHPNDCGRVWQSVTDHLEGRTAQHKIEYRMRTRQGEYKWILDCAKIVNY 431 Query: 233 DVLAHLQNLVMTFSDITEERQIRQLEG-------NILAAMCSSPPFHEM-------GEII 278 + T +DIT+ + + N AM + + E+ Sbjct: 432 GEDQQPLRMSGTHTDITKRKLAEESMQLASMVYQNSREAMTVTDSNGNIITTNPAFTEMT 491 Query: 279 CRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGA----PAG 332 + + + +SH + + + ++ + + W + R ++G G Sbjct: 492 GYSADEITGKSHTFIVSKQQDKRVY---QRMELALNSTGHWRGEVSCRHKNGENYMALLG 548 Query: 333 ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHN 392 I I + + +DI+ E++KS + I + FD +TGL NR H+ Sbjct: 549 INSIYNED-RSVHRRVAQFSDIT--------ERKKSEKIIWKQANFDNLTGLSNRQMFHD 599 Query: 393 YLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLC 448 L +KA + + +D + V D+LG+ DQ L++V R R ++ + Sbjct: 600 QLLHEKNKAQRRGLNVGLLFLDLDRFKAVNDTLGHNMGDQLLIDVAQRLRNCVRKRDLVS 659 Query: 449 RIEGTQF-VLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNR 505 R G +F V++ + ++ ++A ++ +++P ++ ++ +T SIGI++ G+ Sbjct: 660 RFGGDEFTVIIGGLKNTQSVERVAQKILCELAEPFLLGEQNVYITPSIGITFYPKDGEAT 719 Query: 506 DYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQI 565 + LL A AM ++ G N + +F+ +M E V+ L L+ A+ NQL+L YQP + Sbjct: 720 EMLLKNADQAMYSAKEKGRNCYHYFTNSMQEQVERGGQLANDLRYALKKNQLELYYQPIV 779 Query: 566 FAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ 625 TG++ EAL RWH P G V P+ FIP+AEE G I IG WV +A Q+A WR + Sbjct: 780 ALGTGQIRKAEALIRWHHPELGMVSPAEFIPIAEETGTIVEIGDWVFRQAADQVAHWRRE 839 Query: 626 NIHIPALSVNLSALHFRSN--QLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTE-IFK 682 + +S+N S + FR + + + + G+ G + +EITE ++++ + + Sbjct: 840 YQNDFQVSINKSPVQFREGGSDITSWLEHLLAL-GLPGQAVVIEITEGLLLDGSSRIVID 898 Query: 683 RIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITS 742 ++ RD G+ +S+DDFGTG+S +S L + +KID+SFV + + L EAI Sbjct: 899 KLLAFRDSGIEVSLDDFGTGYSSMSYLRKFHIDNLKIDQSFVRNLKVDSDDMILCEAIII 958 Query: 743 IGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 + L + V+AEG+E +EQ +L C QGY F++PLP ++ + Sbjct: 959 MAHKLGMQVIAEGIENEEQRRLLSAAGCDYGQGYLFAKPLPEKDFSCLL 1007 Score = 80.1 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 97/303 (32%), Gaps = 25/303 (8%) Query: 87 MSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLD 146 E+ L + ++A + ++ +R A KE D Sbjct: 157 FPWEMTLAVLSNISLPVLLLYPLITALLGMLFVQRLRRNQSTDALKESEFLFRSQFDLGS 216 Query: 147 RPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTA 206 + + P + ++ N E+ GY E + L + + D Q L + Sbjct: 217 IGIAITYPGKGWLRVNPRLCEILGYREEELLLLNWSELTHPDDRHLDLYQYDQMLTGEED 276 Query: 207 RDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMC 266 + + + GE +++ +IS Y V +Q ++ D +E + + Sbjct: 277 GYSLDKRFIRKDGESVYVHMTISC-YRVDGAVQFVIAGILDSSERKHAEDKIRGRKEQLL 335 Query: 267 SSPPFHEMG------------------EIICRNIESVLNESHVSLFAL-RNGMPIHWASS 307 S E+G E++ E + N++ ++L ++ N W S Sbjct: 336 SVLSGSELGFWDWNIEANTVHRNARWAEMLGYRFEDIQNDTSINLDSVHPNDCGRVWQSV 395 Query: 308 SHGAEIQNAQS-WSATIRQRDGAPAGIL----QIKTSSGAETSAFIERVADISQHMAALA 362 + E + AQ +R R G IL + + DI++ A Sbjct: 396 TDHLEGRTAQHKIEYRMRTRQGEYKWILDCAKIVNYGEDQQPLRMSGTHTDITKRKLAEE 455 Query: 363 LEQ 365 Q Sbjct: 456 SMQ 458 >UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=B1XZA8_LEPCP Length = 1147 Score = 782 bits (2020), Expect = 0.0, Method: Composition-based stats. Identities = 208/821 (25%), Positives = 354/821 (43%), Gaps = 46/821 (5%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVM-FFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 A A++ + L + + ++ + +KL RE+VIG I L+P Sbjct: 342 ALAASERHLRAVVAALPDLIFLFDADGVIVDLWASQQDKLL-MPREQVIGRAIADLLPPS 400 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRD 124 L +I A++ E L DG + +++ G LA+ RD Sbjct: 401 LTATALHHIARVLAEDAAQI----FEYTLPLPDGEHGFEM----RMARAGSREVLAIARD 452 Query: 125 ASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 + E + ++ L +AVD + D + A+ + Y ++ + Sbjct: 453 ITAERDARAALQRSEASLRLAVDGSGDGLWDWDLITDKISFGAAYARLLRYPGNDLARDF 512 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 P+ + ++ + + + GE W + D Q Sbjct: 513 RFRERLHPDDRDRSIAAVRNSIEYGTPFVATYRMRCFDGEYRWFQGRGMCHRDAHGTPQR 572 Query: 241 LVMTFSDITEERQIRQLE---GNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALR 297 +D+T+ Q + + + + I + + + Sbjct: 573 FSGVLTDLTDRLQAEERLRLAAQVFDSTQEGVMITDARRRIVSVNRAFTTLLGYTETEVL 632 Query: 298 NGMPIHWASSSHG--------AEIQNAQSWSATI--RQRDGAPAGIL---QIKTSSGAET 344 P +S H A++ + W I R +DG+P L + Sbjct: 633 GQTPRMLSSGRHDRDFYEAMQAQLDHTGLWQGEIWNRHKDGSPVPELLSISAVRDPHGQV 692 Query: 345 SAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA--- 401 + ++ DI+ ++S +E L DP+T LPNR +N LD + +A Sbjct: 693 THYVGVFTDITH--------LKESEARLEFLAHHDPLTHLPNRLLFNNRLDQALHQAERE 744 Query: 402 -VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL 460 V L+ +D +D+ DS G+ D+ L V R ++L+ L R+ G +F L+ Sbjct: 745 GRRLAVLLLDLDRFKDINDSYGHLAGDELLKYVAQRLTQRLRQSDTLARLGGDEFALLMH 804 Query: 461 E-NDVSNITQIADELRNVVSKPIMI-DDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAM 516 + + ++A EL + +S+P + + +SIGI D G+ LL A A+ Sbjct: 805 DLRHDDDAARLASELLSGLSEPWRSSEGVEVSVGVSIGICIYPDHGRTPQTLLQGADAAL 864 Query: 517 DYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIE 576 + +G +++++ M + +ERL + A L+ A+++ QL L YQPQ+ +G + G E Sbjct: 865 YRAKGDGRGVYRYYADEMTRIARERLHIEARLRRALADGQLLLHYQPQVDLRSGRIIGAE 924 Query: 577 ALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNL 636 AL RW DP G +PP RFIP+AE G I IG WV+ EACRQ W + ++VN+ Sbjct: 925 ALVRWQDPEQGLIPPVRFIPVAEATGLIGEIGAWVLGEACRQARAWLDAGLPALTVAVNV 984 Query: 637 SALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSV 696 S F L QV + G+ L +E+TE +ME + E + +Q LR +GVG+++ Sbjct: 985 SPRQFHQADLATQVMQVLVETGLPPTHLELELTEGALMEREAEALQVLQRLRGLGVGVAI 1044 Query: 697 DDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGV 756 DDFGTG+S L+ L P+ +KID+SF+ + + + AI ++G SL + V+AEGV Sbjct: 1045 DDFGTGYSSLASLKRFPIDVLKIDRSFITDIPDDPDDMEIAAAIIAMGHSLGILVLAEGV 1104 Query: 757 ETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPL 797 ET EQ L++ +C QG+ SRPLPA+ + L Sbjct: 1105 ETAEQLAFLQQRNCDRYQGFLRSRPLPAQAFEQLLREQASL 1145 Score = 98.2 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 82/236 (34%), Gaps = 10/236 (4%) Query: 24 GAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKAR 83 G L + + N ++ G EE + D A + + G R Sbjct: 72 GISLTALDGRLTEVNRRFAEIVGRTVEETQRLRFQDITHPDDLAADLDKVADLLAG---R 128 Query: 84 VEGMSRELQLEKKDGSKIWTRFALS--KVSAEGKVYYLALVRDASVEMAQK----EQTRQ 137 ++ E + + D S IW +S + + ++++V+D + + Q RQ Sbjct: 129 IDRYRMEKRYLRPDSSTIWVTLTVSLARGADGQPRQFISVVQDITAVKQAEGDLLRQRRQ 188 Query: 138 LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIR 197 L + + V V D + + N A + G +E G + + PE R Sbjct: 189 LQQIIQSIPDCVAVRDLDGRYLLANPAAERLIGLSEAEICGRTLEQIYPEPEAGQARRAD 248 Query: 198 LQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQ 253 + L + + E G + +ISP+ + ++ D++ ER Sbjct: 249 -RLALSQNGLVRREASYTAADGSVATVDLAISPLLGIDGRATGIISVGRDVSRERH 303 Score = 78.2 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 40/276 (14%), Positives = 90/276 (32%), Gaps = 20/276 (7%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 + R A + ++ +++ V + + + + + NR F E+ G + E ++ Sbjct: 45 IRRAARAQEQAEQAHKRVADVVADAAVGISLTALDGRLTEVNRRFAEIVGRTVEETQRLR 104 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 + + + AD L + R + E L IW+ ++S + Sbjct: 105 FQDITHPDDLAADLDKVADLLAGRIDRYRMEKRYLRPDSSTIWVTLTVSLARGADGQPRQ 164 Query: 241 LVMTFSDITEERQIRQLEGNILAAMCSS----PPFHEMGEIICR------NIESVLNESH 290 + DIT +Q + P + ++ R E ++ S Sbjct: 165 FISVVQDITAVKQAEGDLLRQRRQLQQIIQSIPDCVAVRDLDGRYLLANPAAERLIGLSE 224 Query: 291 VSLFALR-NGMPIHWASSSHGAEIQNAQSWSATIRQR------DGAPAGI---LQIKTSS 340 + + + + A S + +R+ DG+ A + + Sbjct: 225 AEICGRTLEQIYPEPEAGQARRADRLALSQNGLVRREASYTAADGSVATVDLAISPLLGI 284 Query: 341 GAETSAFIERVADISQHMAALALEQEKSRQHIEQLI 376 + I D+S+ L L ++ R++ E L Sbjct: 285 DGRATGIISVGRDVSRERHNLRLLEQAHRRNHELLA 320 Score = 69.7 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 69/422 (16%), Positives = 120/422 (28%), Gaps = 82/422 (19%) Query: 22 MMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGK 81 + + + + NPAAE+L G E+ G ++ + P R Sbjct: 197 PDCVAVRDLDGRYLLANPAAERLIGLSEAEICGRTLEQIYPE----PEAGQARRADRLAL 252 Query: 82 ARVEGMSRELQLEKKDGSKIWTRFALSK-VSAEGKV-YYLALVRDASVEM---------- 129 ++ + RE DGS A+S + +G+ +++ RD S E Sbjct: 253 SQNGLVRREASYTAADGSVATVDLAISPLLGIDGRATGIISVGRDVSRERHNLRLLEQAH 312 Query: 130 -----------------------------AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQ 160 A R L V L + + D + IV Sbjct: 313 RRNHELLAEAERSRLALLSLLEDQQLGQQALAASERHLRAVVAALPDLIFLFDADGVIVD 372 Query: 161 CNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGE 220 + + + G LL P A + ++L + A E+ L GE Sbjct: 373 LWASQQDKLLMPREQVIGRAIADLLP-PSLTATALHHIARVLAEDAAQIFEYTLPLPDGE 431 Query: 221 KIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMG----E 276 + A + ++ DIT ER R A++ + G + Sbjct: 432 ------HGFEMRMARAGSREVLAIARDITAERDARAALQRSEASLRLAVDGSGDGLWDWD 485 Query: 277 IICRNIE---------SVLNESHVSLFALRNGMPIHWASSSHGA---EIQNAQSWSATIR 324 +I I F R + S A I+ + AT R Sbjct: 486 LITDKISFGAAYARLLRYPGNDLARDFRFRERLHPDDRDRSIAAVRNSIEYGTPFVATYR 545 Query: 325 QR--DGAPAGILQ---IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQ-F 378 R DG + F + D++ + ++ + + Q F Sbjct: 546 MRCFDGEYRWFQGRGMCHRDAHGTPQRFSGVLTDLTDRL--------QAEERLRLAAQVF 597 Query: 379 DP 380 D Sbjct: 598 DS 599 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 782 bits (2020), Expect = 0.0, Method: Composition-based stats. Identities = 202/710 (28%), Positives = 331/710 (46%), Gaps = 44/710 (6%) Query: 115 KVYYLALVRDASVEMAQKEQTRQLIIAVDHLDR----PVIVLDPERHIVQCNRAFTEMFG 170 + L++ + + + ++ LD + +Q + +FG Sbjct: 224 GLTALSVAVLNAQHRRSEHALKLSEDNLNRAQSIVGIGSWHLDIVNNCLQWSDETYHIFG 283 Query: 171 YCISEASGMQPD-TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASIS 229 + ++ + NR QQ L + D + +L+ GE W++ + Sbjct: 284 VAEGTPLNYEVFLEHVHADDRDLVNR-TWQQALLRQPYDIEHRILV--NGEIRWVREKAN 340 Query: 230 PVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNES 289 +D + + T DIT +Q SS + + R + +N S Sbjct: 341 LDFDAHGNAVYAIGTVRDITRYKQEEATLRLAARVFDSSGEAILITDENVRVV--AVNHS 398 Query: 290 HVSLFALRNGM-----PIHWASSSHGAEIQNA--------QSWSATI--RQRDGA----P 330 V++ R+ P +S H AE A W I + + G Sbjct: 399 FVAMSGYRSEEVMGKNPRMLSSGRHDAEFYRAMWDDINQHGYWQGEIWDKHKSGRIYPKW 458 Query: 331 AGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNL 390 I ++ G +I D + EQ ++ ++I L +D +TGLPNR L Sbjct: 459 MSITAVRDEHGKVV-NYISIARDTT--------EQTEAEKNIHFLAYYDVLTGLPNRTLL 509 Query: 391 HNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQY 446 + L ++ A + + +D + + DS+G++ D+ L V R ++ ++ Sbjct: 510 RDRLGQMIAVAHRDKHQFSLIFLDLDRFKYINDSMGHSVGDRLLQSVALRIQDCVREGDT 569 Query: 447 LCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKN 504 + R+ G +F+++ E S + +A +L ++ P +D + SIGIS D ++ Sbjct: 570 VARLGGDEFIVLLREAGESAASVVAQKLLIALATPYDLDGQVISTQASIGISIYPDQAQD 629 Query: 505 RDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQ 564 D L+ A AM ++ G N +QFF P MN V + L+ A+ +L L YQPQ Sbjct: 630 ADTLIKNADMAMYRAKEEGRNNFQFFVPEMNFRVDLLFSMEKDLRLALERGELFLQYQPQ 689 Query: 565 IFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRS 624 +G L G+EAL RW P+ G V P+ FIP+AEE G+I IG WV+ AC Q+AEWR Sbjct: 690 ADLASGTLSGVEALIRWDHPVKGQVSPAEFIPVAEETGQIVAIGEWVLRTACSQMAEWRK 749 Query: 625 QNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRI 684 +H ++VNLS R L + + G+D L +EITE +MM + F+ + Sbjct: 750 TGMHDLTIAVNLSIRQLRQPDLAELIKSVLLETGLDARHLELEITEGIMMGDNQAAFRFL 809 Query: 685 QILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIG 744 ++D+GV LS+DDFGTGFS L+ L +PV ++KID+SF+ T++ A++ +I S+G Sbjct: 810 SEMQDLGVQLSIDDFGTGFSSLNYLKQMPVNKLKIDQSFIRDIETDEGDAAIIRSIISLG 869 Query: 745 QSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 LNL V+AEGVET+EQ + LR C IQGYF+SRPL AE+ ++ + Sbjct: 870 HRLNLRVIAEGVETQEQLDFLRIRGCDEIQGYFYSRPLLAEDFMRFVKAP 919 Score = 118 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 49/326 (15%), Positives = 106/326 (32%), Gaps = 10/326 (3%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A ++ A +G+ ++ + + ++ ++G G ++ + + Sbjct: 243 ALKLSEDNLNRAQSIVGIGSWHLDIVNNCLQWSDETYHIFGVAE----GTPLNYEVFLEH 298 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTR--FALSKVSAEGKVYYLALVR 123 A + + + E ++ +G W R L + VY + VR Sbjct: 299 VHADDRDLVNRTWQQALLRQPYDIEHRIL-VNGEIRWVREKANLDFDAHGNAVYAIGTVR 357 Query: 124 DASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDT 183 D + ++ R D +++ D +V N +F M GY E G P Sbjct: 358 DITRYKQEEATLRLAARVFDSSGEAILITDENVRVVAVNHSFVAMSGYRSEEVMGKNPRM 417 Query: 184 LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVM 243 L + R + + Q E ++G SI+ V D + N + Sbjct: 418 LSSGRHDAEFYRAMWDDIN-QHGYWQGEIWDKHKSGRIYPKWMSITAVRDEHGKVVNYIS 476 Query: 244 TFSDITEERQIRQLEGNI--LAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMP 301 D TE+ + + + + P + + + + I + H + Sbjct: 477 IARDTTEQTEAEKNIHFLAYYDVLTGLPNRTLLRDRLGQMIAVAHRDKHQFSLIFLDLDR 536 Query: 302 IHWASSSHGAEIQNAQSWSATIRQRD 327 + + S G + + S +R +D Sbjct: 537 FKYINDSMGHSVGDRLLQSVALRIQD 562 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 779 bits (2013), Expect = 0.0, Method: Composition-based stats. Identities = 197/698 (28%), Positives = 331/698 (47%), Gaps = 33/698 (4%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLD-PERHIVQCNRAFTEMFGYCISEASGM 179 + R + + E ++ D + + V N+AF E+ GY + E + Sbjct: 541 IARSQTFQATLMESEQRYRTLFDKAPVGHALKRLEDGQFVAINQAFMEITGYTLEELQAI 600 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 P L I + + +L++L + + G+ + ++ + S V Q Sbjct: 601 DPWELTPIR-YQSSETEQLERLKQTRRYGPYQKHYRHKDGQLVAVRLNGSLVTAANGE-Q 658 Query: 240 NLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESHVSL 293 ++ DITE+ + + S + + + + S + Sbjct: 659 LILFIVEDITEQERTVARVNLLAQVFQQSGEGITIMDANDIIVDVNSAFTQITGYSRDEI 718 Query: 294 FA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG---ILQIKTSSGAE 343 L + A ++ W + R ++G ++ I Sbjct: 719 IGKNCRFLEAERTDRSIDAQVRAALEQTGFWQGEVWDRHKEGFDFPKWLMMSIVRDETGA 778 Query: 344 TSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA-- 401 S +I DIS E++ + + I L D +T LPNR +L + L+ + +A Sbjct: 779 ISHYIGSFTDIS--------ERKVNEERIHFLAHHDSLTLLPNRLSLQSRLEKVFQEAFI 830 Query: 402 --VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVS 459 V I +DH +++ D+LG+ D LLEV R + + D + R+ G +FV+V Sbjct: 831 SQTQIAVMFIDMDHFKNINDTLGHHVGDMLLLEVARRLKNIMGNDDIVARLGGDEFVVVL 890 Query: 460 LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMD 517 + D + ++A+ LR+ +++ +ID+KP + SIGIS G + + L+ A AM Sbjct: 891 SDTDHDRVAKVAEALRSGLNQTYLIDNKPLHSSPSIGISLFPTDGDSVEALMKNADMAMY 950 Query: 518 YIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEA 577 + G N +QFF+ AMN +V ER + L++AI+ N+L L YQPQ+ +G++ G+EA Sbjct: 951 RAKAAGRNNYQFFTAAMNTLVTERQQIETGLRQAIACNELLLYYQPQVDISSGQVVGVEA 1010 Query: 578 LARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLS 637 L RW P G V P RFIP+AEEI I IG+WV+ A QLAEWR + ++VNLS Sbjct: 1011 LIRWQHPELGLVAPDRFIPIAEEIDMIIPIGQWVLENALAQLAEWRDKGAKGLRMAVNLS 1070 Query: 638 ALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVD 697 A R + + + + + + L +EITES+ M++ + K + LR G+ L++D Sbjct: 1071 AHQLRKDTIVADIINVLTKHKLGKGALELEITESVAMQYPEQNAKLLAELRQHGIELAID 1130 Query: 698 DFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVE 757 DFGTG+S LS L LP+ +K+D+SFV ++ A+ A S+ L LTVVAEGVE Sbjct: 1131 DFGTGYSSLSYLKLLPLDRLKLDRSFVKDIESDPNDAAISAATISMAHELGLTVVAEGVE 1190 Query: 758 TKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 + Q +L + C ++QGY+FS+PL A++ ++ Sbjct: 1191 NEAQLVLLSGMGCDLVQGYYFSKPLAADDCFRFIERNF 1228 Score = 148 bits (374), Expect = 9e-34, Method: Composition-based stats. Identities = 61/367 (16%), Positives = 132/367 (35%), Gaps = 19/367 (5%) Query: 9 AADGIFFPALEQNMMG-AVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP 67 ++ + ++ +G A+ E+ + + N A ++ GY EE+ + L P + Sbjct: 553 ESEQRYRTLFDKAPVGHALKRLEDGQFVAINQAFMEITGYTLEELQAIDPWELTPIRYQS 612 Query: 68 AHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA-EGKVYYLALVRDAS 126 + E + ++ + + KDG + R S V+A G+ L +V D + Sbjct: 613 SETEQLERLKQTRRY----GPYQKHYRHKDGQLVAVRLNGSLVTAANGEQLILFIVEDIT 668 Query: 127 VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 + + L + ++D IV N AFT++ GY E G L Sbjct: 669 EQERTVARVNLLAQVFQQSGEGITIMDANDIIVDVNSAFTQITGYSRDEIIGKNC-RFLE 727 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 +++ L +T Q E + G +S V D + + + +F+ Sbjct: 728 AERTDRSIDAQVRAALEQTGFWQGEVWDRHKEGFDFPKWLMMSIVRDETGAISHYIGSFT 787 Query: 247 DITEERQIRQL-----EGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMP 301 DI+E + + + L + + E + + E+ ++++ +++ + Sbjct: 788 DISERKVNEERIHFLAHHDSLTLLPNRLSLQSRLEKVFQ--EAFISQTQIAVMFIDMD-- 843 Query: 302 IHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAAL 361 H+ + + + +R G I G + F+ ++D A Sbjct: 844 -HFKNINDTLGHHVGDMLLLEVARRLKNIMGNDDIVARLGGD--EFVVVLSDTDHDRVAK 900 Query: 362 ALEQEKS 368 E +S Sbjct: 901 VAEALRS 907 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 779 bits (2012), Expect = 0.0, Method: Composition-based stats. Identities = 200/713 (28%), Positives = 344/713 (48%), Gaps = 50/713 (7%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 L + +VE A + +QL +D V V+D + + NRA +M G E G Sbjct: 322 LAKARAVEQALLDARQQLNDIIDFFPDAVFVIDRNKRVTIWNRAIEKMSGVPKEEMLGKG 381 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKI---------------WIK 225 D +IP + L L A ++ + R GE + ++ Sbjct: 382 -DHEYSIPFYGQRRTQLLDLLDLDDAELAAKYSNIRRVGEVLDAETFCPALHDGKGAYVW 440 Query: 226 ASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAM---CSSPPFHEMGEIICRNI 282 A+ P+Y+ + DI++ +Q + + S+ + +I Sbjct: 441 ATGVPLYNAAGERIGAIEAIRDISDRKQSELFLKKLTHGIENSASAVVITDTQGVIEYVN 500 Query: 283 ESVLNESHVSLFALRNGMPIHWASSSHGAE--------IQNAQSWSATI--RQRDGAPAG 332 + + + SL P S + E I + + W + R+++G Sbjct: 501 KKFIQLTGFSLEEAVGKNPRILKSEATPPEVFVDLWKTILSGREWRGELLNRRKNGEVYW 560 Query: 333 ----ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRN 388 I ++ SG E + FI V DI+ E++ + IE L FDP+T LPNR Sbjct: 561 SITSISPLRNDSG-EITHFIANVEDIN--------ERKNAEATIEHLAYFDPLTDLPNRR 611 Query: 389 NLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPD 444 L + L+ + ++ + + +D + V DS+G+ D L E+ RF ++ D Sbjct: 612 MLQDRLELALRRSRRHGSNVALMYLDLDSFKHVNDSMGHPAGDLLLKEMAGRFSGVVRDD 671 Query: 445 QYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--L 501 +CR+ G +F L+ + + ++ IA +L V++P+ +D + +T SIGI+ Sbjct: 672 DVVCRLGGDEFALILHDIHQDQDVVPIAQKLIEAVAQPVPLDGREVVVTASIGIALFPRD 731 Query: 502 GKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVY 561 G + L A A+ + ++ G N ++F+ +N + R+ L L+ A +L+L Y Sbjct: 732 GGDVKNLEKHADIALYHAKEEGKNTFRFYLEELNSTISTRIALEQGLRYAKERQELELHY 791 Query: 562 QPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAE 621 QP++ +G++ G+EAL RWH P G V P RFIPLAE+ I IG WV+ AC Q + Sbjct: 792 QPKVCVASGKVSGVEALLRWHSPDFGLVSPIRFIPLAEQTRLIIPIGEWVLRTACLQQVQ 851 Query: 622 WRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIF 681 WR Q + + ++VNLSA+ +S L +V+ + GI L +E+TES ++ + E+ Sbjct: 852 WREQGL-LLNMAVNLSAIQLKSPGLVERVAAIIDETGIQPEHLELELTESALVNNPDEVV 910 Query: 682 KRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAIT 741 + ++ LR +G +S+DDFGTG+S LS L S PVT +KID+SFV A+ ++ Sbjct: 911 QLLERLRTLGCSISIDDFGTGYSSLSYLKSFPVTILKIDRSFVRDLAHNSGDRAIARSVV 970 Query: 742 SIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 + +L++ VAEGVE++EQ +L++I C IQG+ +SRP+ A+++ + + Sbjct: 971 DLANNLDMKTVAEGVESEEQLTILQQIGCTYIQGFIYSRPVQADQVSAVVRRL 1023 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 67/384 (17%), Positives = 136/384 (35%), Gaps = 36/384 (9%) Query: 10 ADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGN-NIDMLIP------ 62 A ++ +I+ N V +N A EK+ G +EE++G + + IP Sbjct: 335 ARQQLNDIIDFFPDAVFVIDRNKRVTIWNRAIEKMSGVPKEEMLGKGDHEYSIPFYGQRR 394 Query: 63 --------RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEG 114 D +Y R G E L K G+ +W +A Sbjct: 395 TQLLDLLDLDDAELAAKYSNIRRVGEVLDAETFCPALHDGK--GAYVWATGVPLYNAAGE 452 Query: 115 KVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS 174 ++ + +RD S + ++L +++ V++ D + I N+ F ++ G+ + Sbjct: 453 RIGAIEAIRDISDRKQSELFLKKLTHGIENSASAVVITDTQGVIEYVNKKFIQLTGFSLE 512 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 EA G P +L P + + L + + + E L + GE W SISP+ + Sbjct: 513 EAVGKNP-RILKSEATPPEVFVDLWKTILSGREWRGELLNRRKNGEVYWSITSISPLRND 571 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNI-----LAAMCSSPPFHEMGEIICRNIESVLNES 289 + + + DI E + ++ L + + + E+ R + Sbjct: 572 SGEITHFIANVEDINERKNAEATIEHLAYFDPLTDLPNRRMLQDRLELALRRSRRHGSNV 631 Query: 290 HVSLFALRNGMPIHWASSSHGAEI---QNAQSWSATIRQRDGAPAGILQIKTSSGAETSA 346 + L + ++ + ++ + A +S +R D + G + Sbjct: 632 ALMYLDLDSFKHVNDSMGHPAGDLLLKEMAGRFSGVVRDDD--------VVCRLGGD--E 681 Query: 347 FIERVADISQHMAALALEQEKSRQ 370 F + DI Q + + Q+ Sbjct: 682 FALILHDIHQDQDVVPIAQKLIEA 705 >UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1G1_PELCD Length = 1061 Score = 776 bits (2006), Expect = 0.0, Method: Composition-based stats. Identities = 216/876 (24%), Positives = 373/876 (42%), Gaps = 98/876 (11%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKRE---EVIGNNID 58 +++ A ++ AL+ + G +N M N + GY + E G+ I Sbjct: 193 QISKALQTSEERLRMALKASKQGLYDLNVQSGNMIVNAEYALILGYDPQNFRETNGDWIA 252 Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRF---ALSKVSAEGK 115 + P D Y + + E E + + G W + + + Sbjct: 253 RMHPEDRSAVLAVYRNY----LAGKTEEFRAEFRQRTRCGQWKWVLSMGKIVERDTHGQP 308 Query: 116 VYYLALVRDASVEMAQKEQTR--------------------------------------- 136 + L D + +EQTR Sbjct: 309 LRMLGTFSDITERRQSEEQTRKAEREKADLLEEAQQARLTLQRLFEEQTLASAEIERTSR 368 Query: 137 QLIIAVDHLDR-PVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP------- 188 L ++ +I DP I NR +M GY E G + T+ ++ Sbjct: 369 LLAEVLNAASEVSIIATDPRGIITVFNRGAEKMLGYSAEEMVGRETPTVFHLASELQTRY 428 Query: 189 -EFPADNRIRLQQLLWKTAR------DQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNL 241 E AD ++ A + E+ ++ GE I + I+ + + Sbjct: 429 TELGADRGTPIKDFADYMAHATTADAEHREWTYTSKQGEHISVSLVITAMRSPAHGIVGY 488 Query: 242 VMTFSDITEERQIRQLEGNILAAMCSSPP---FHEMGEIICRNIESVLNESHVSLFALRN 298 + DITE ++ + + SP + I + SL + Sbjct: 489 LGIAQDITERKRQENTLRKLSQVVEQSPTAVILTDPQGNIEYANPKFTQITGYSLTEVHG 548 Query: 299 GMPIHWASSSHGAE--------IQNAQSWSATI--RQRDGAPAG----ILQIKTSSGAET 344 P S AE I + W +++DG+ I ++ +G + Sbjct: 549 KNPRLLKSGETSAEEYRDLWTTITAGREWHGEFHNKRKDGSLFWEHASISPVRNDAG-DI 607 Query: 345 SAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP 404 S F+ DI+ ++++ + ++ L D +TGL NR L + L+ + A Sbjct: 608 SHFLAIKEDIT--------DRKRYEEQLQHLATHDNLTGLANRALLQDRLEQSILFAKRS 659 Query: 405 V----VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL 460 L+ +D + + DSLG+++ D+ L +R RE ++ + R+ G +FV++ Sbjct: 660 GRLVAALLLDLDRFKIINDSLGHSFGDRLLQIAADRLRESVRGADTVARLGGDEFVILLA 719 Query: 461 E-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMD 517 E + ++ ++A ++ + ++ P I D+ +T S+GIS G++ + L+ A AM Sbjct: 720 EVANEEDVGKVAKKILDRITAPFQIADREITVTASLGISIYPQDGEDEETLIRNADIAMY 779 Query: 518 YIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEA 577 ++ G N ++ ++P MN +V E + + L+ A+ +L L YQP+I ++G++ G EA Sbjct: 780 QAKEEG-NAFRLYAPEMNIVVHEAMEMETDLRRALDRGELLLHYQPKIDLDSGKITGAEA 838 Query: 578 LARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLS 637 L RW P+ G + P FIPLAEE G I IG WV+ C Q+ W++Q + ++ NLS Sbjct: 839 LVRWQHPVRGMIAPGMFIPLAEETGLILPIGEWVLENICLQIKSWQTQGFPLVPIAANLS 898 Query: 638 ALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVD 697 A FR+++L + + G+ H L +E+TESM+M + + +Q L +GV L++D Sbjct: 899 ARQFRNDELIATIQRILQDTGLPPHLLELELTESMIMRNVQTAAETMQELNALGVSLALD 958 Query: 698 DFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVE 757 DFGTG+S L+ L PV +KID+SF+ + A+ +I +I SL L VAEGVE Sbjct: 959 DFGTGYSSLNYLRRFPVDCLKIDRSFISDVADDPSAAAVATSIIAIAHSLGLQAVAEGVE 1018 Query: 758 TKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 T+EQ E LR+ C QGY +S PL EE + Sbjct: 1019 TEEQLEFLRQCACDSYQGYLYSAPLAVEEFTAMLRQ 1054 Score = 67.0 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 40/268 (14%), Positives = 83/268 (30%), Gaps = 3/268 (1%) Query: 101 IWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQ 160 + +A L R + A + +L +A+ + + L+ + + Sbjct: 168 LPVLLIYPLATAMLGSLMLKRQRRDQISKALQTSEERLRMALKASKQGLYDLNVQSGNMI 227 Query: 161 CNRAFTEMFGYCISEASGMQPDTL--LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRT 218 N + + GY D + ++ + A + L KT + EF TR Sbjct: 228 VNAEYALILGYDPQNFRETNGDWIARMHPEDRSAVLAVYRNYLAGKTEEFRAEFRQRTRC 287 Query: 219 GEKIWIKASISPV-YDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI 277 G+ W+ + V D ++ TFSDITE RQ + + + Sbjct: 288 GQWKWVLSMGKIVERDTHGQPLRMLGTFSDITERRQSEEQTRKAEREKADLLEEAQQARL 347 Query: 278 ICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIK 337 + + + + + ++S + I T+ R + Sbjct: 348 TLQRLFEEQTLASAEIERTSRLLAEVLNAASEVSIIATDPRGIITVFNRGAEKMLGYSAE 407 Query: 338 TSSGAETSAFIERVADISQHMAALALEQ 365 G ET +++ L ++ Sbjct: 408 EMVGRETPTVFHLASELQTRYTELGADR 435 >UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4VY11_9CYAN Length = 1393 Score = 776 bits (2006), Expect = 0.0, Method: Composition-based stats. Identities = 204/827 (24%), Positives = 342/827 (41%), Gaps = 55/827 (6%) Query: 7 DNAADGIFFPALEQNMMGAVLINEN---DEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 A + A+ + G ++ + N + V++ NPA E + GY +EVIG+N Sbjct: 574 SEANLYLMQRAIAASNNGVIITDPNQPDNPVIYVNPAFESMTGYTAKEVIGHNCRFWQEP 633 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLAL 121 D A + + + LQ +KDGS W +S V +++ + Sbjct: 634 DYNQAGVTKLATAIQEQREC----HVILQNYRKDGSTFWNELYVSPVFDGDGYLTHFVGI 689 Query: 122 VRDASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDPERH-IVQCNRAFTEMFGYCISEA 176 D + +E RQ L + LD V E + N A ++G +S+ Sbjct: 690 QTDITKRKQAEEALRQSEEKLDSILRSLDDVVWSASLENQQFIYLNPATERVYGRPVSDF 749 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 I R + E+ ++ GE W++ +YD Sbjct: 750 VDCPSLWQFVIHPDDRQRVERASNRMMHQGSKDLEYRVVRPDGEVRWLRDRARLIYDHRG 809 Query: 237 HLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMG------------------EII 278 + +D+T+ +Q + +G + + Sbjct: 810 IAIRMDGIATDMTKRKQAEAALLKSEEQFRLTFELAPIGMAMTSLEGQFLKVNQALCDAL 869 Query: 279 CRNIESVLNESHVSLFALRN-GMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGIL--- 334 + +L + + + S E+ + Q+ + + G + Sbjct: 870 GYTAQELLALTFTEISHPTERALHFTQHQSLLQGELSHLQT-ERRLISKSGRIVNAILKV 928 Query: 335 QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYL 394 + + + +I +V DIS ++++ + + D +TGLPNR + L Sbjct: 929 VLVRDAQGQPLHYISQVVDIS--------DRKRMEEQLLHDAFHDVLTGLPNRALFMDRL 980 Query: 395 DDLVDKAVS-----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCR 449 + + +A V ++ +D + + DSLG+ D+ L + R + L+P L R Sbjct: 981 EYALRRAGQRWDYLCAVIVLDLDRFKVINDSLGHLVGDRLLSAIAERLQGCLRPSDTLAR 1040 Query: 450 IEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDL--GKNRD 506 + G +F ++ + + + T IA + + +D T SIGI+ + Sbjct: 1041 LGGDEFTILLDDIPNTAAATDIAKSIHQTLESSFNLDGYEVFATASIGIALSGMGYHRAE 1100 Query: 507 YLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIF 566 LL A AM + G + F AM+ +L L L+ AI +L++ YQP I Sbjct: 1101 DLLRDADTAMHRAKLQGTACYVMFDTAMSGRALAQLRLETELRWAIERQELEVYYQPIIS 1160 Query: 567 AETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN 626 TG++ G EAL RW P G + P FIPLAEE G I IG+WV+ +C QL +W+ Q Sbjct: 1161 LGTGKITGFEALVRWQHPEQGMISPGAFIPLAEETGLIIPIGQWVLRTSCYQLRQWQQQF 1220 Query: 627 --IHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRI 684 +SVNLS F L Q++ + ++ L +EITES +MEH + Sbjct: 1221 PHYPPLTMSVNLSGKQFSQTNLIEQIAQIIQETEVNPSTLKLEITESGIMEHSDSASALL 1280 Query: 685 QILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIG 744 + L+ + + L +DDFGTG+S LSRL P+ +KID+SFV R +++AI ++ Sbjct: 1281 ERLKALNIQLYIDDFGTGYSSLSRLHQFPIDALKIDRSFVSRMGDAGENGEIVQAIVTLA 1340 Query: 745 QSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 +L + VVAEG+ET Q LR C QGYFFS+PL + M Sbjct: 1341 HNLGMDVVAEGIETNMQLAQLRGRRCEYGQGYFFSKPLNRQAAEQLM 1387 Score = 63.1 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 44/325 (13%), Positives = 107/325 (32%), Gaps = 47/325 (14%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINE--NDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 T+A+ F A+ Q V I + +++ N A L+G E++GN++ Sbjct: 131 TNAELQQQEEQFRAITQAFPVPVAIARVSDGTIVYGNSHANVLFGVATSELVGNSMPDFY 190 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLAL 121 +P + + + EL + +G+ +W ++ ++ + L++ Sbjct: 191 ------ENPADWQRLLARLDQKGVVQNEELCVHTINGTPLWVTVSMQVLTLNQEKAILSV 244 Query: 122 VRDASV-----------EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFG 170 D S E K+ V+ + L+ + +V N ++ G Sbjct: 245 FHDISDTYQQLTQYQQTEAVLKDSEACYRTLVEQSPNAI-ALEHQGTLVYINPRGVKLLG 303 Query: 171 -YCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTR------------ 217 ++ G P+ + R R + + + R Sbjct: 304 TISHNQLIGKPWSDF--NPKDQGNQRDREDHQVIGSEYTEKFSDHKRRSNPPHALTLPTK 361 Query: 218 ---------TGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSS 268 G+ I ++ + P + + + D+T Q Q E + A ++ Sbjct: 362 FVTEQIVQLDGQIIDVEIARLPA--IYQGQRATQLVIRDLTHREQPDQ-ELRVRARQQAT 418 Query: 269 PPFHEMGEIICRNIESVLNESHVSL 293 + ++ ++++E+ ++ Sbjct: 419 IAKLSQRALSGLDLNTLMDEAVSTI 443 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 776 bits (2004), Expect = 0.0, Method: Composition-based stats. Identities = 194/752 (25%), Positives = 348/752 (46%), Gaps = 63/752 (8%) Query: 101 IWTRFALSKVSAEGKVYYLALVRDASV------EMAQKEQTRQLIIAVDHLDRPVIVLDP 154 +++R L + +L +R A+ E + E+ L +D + PV D Sbjct: 133 VFSRRPLGDIEMAETALHLFAMRAAAELERIKIERQRDEELHFLQSLLDAIPNPVFYKDL 192 Query: 155 ERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQD-EFL 213 + + CNR++ ++ + G + ++ P A IR ++ +A + E Sbjct: 193 DSRYLGCNRSYEDLLRKSRQDIIGHRAADVM--PPLRAVVAIREDNKVYDSALSRTYEST 250 Query: 214 LLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCS---SPP 270 + + + + +P +D L LV T DI+ R+++ +++ + S Sbjct: 251 IEEPDHGTMQVLFNKAPFFDQDGELAGLVGTIQDISSLREMQSAMQSLVESTVGFTGSNC 310 Query: 271 FHEMGEIICRNIES---VLN-----ESHVSLFALRNGMPI-------------------- 302 + + + +C+ ++ ++ +SL +++G+ + Sbjct: 311 YRRVAQQLCQWFDADCAIVGRIQEEGKVLSLATIQDGVSMPSYSFNLSDTPCEKVVDEGM 370 Query: 303 ---------HWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVAD 353 H+ + S ++ IR +G G+L + + ++ + V Sbjct: 371 CLMSEGVMEHYPNCSLVTQMHAEGYVGTPIRDHNGEVLGVLSVLSRGKIKSLERAKDVLA 430 Query: 354 ISQHMAALALEQEKSRQHI-------EQLIQFDPMTGLPNRNNLHNYLDDLVDKAV---- 402 I + +E+E S Q + E L+ D +T LPNR + L + A Sbjct: 431 IMAARVSAEIEREISEQRLRDNEDHLEYLVYHDVLTDLPNRQLFRDRLQHAISMASLGQH 490 Query: 403 SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE- 461 V I +DH + + DSLG+ D+ L EV R R + + R+ G +F ++ + Sbjct: 491 QVGVLFIDLDHFKKINDSLGHEVGDRLLCEVARRLRLCIGGLDTVARLSGDEFAIILDQL 550 Query: 462 NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYI 519 N++ N+ IA E+ +++ ++++ LT SIGIS GK+ LL A AM Sbjct: 551 NNIENVILIAQEVNRRLAEMMVVEGYKLFLTASIGISLYPGDGKDVVSLLKCADAAMFKA 610 Query: 520 RKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALA 579 ++ G + ++F++ +NE E L L AL++A+ N L + +QPQ+ + + G EAL Sbjct: 611 KELGRDNYRFYTAGLNERASELLALEGALRQAVDKNHLVVYFQPQVELASRRIIGAEALV 670 Query: 580 RWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSAL 639 RW P +G + P FIP+AEE G I +IG WV+ ++C Q +W+ +SVN+SA Sbjct: 671 RWQHPENGMISPVDFIPMAEETGLIVSIGEWVLRQSCLQARQWQVAGYPPMRISVNMSAR 730 Query: 640 HFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDF 699 FR L V + G+ L +EITES++M +R+ L +G+ LS+DDF Sbjct: 731 QFRQKDLVPMVRRILQETGLSPEYLDLEITESILMNDVDGAVERLVELHSLGIQLSIDDF 790 Query: 700 GTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETK 759 GTG+S L+ L P+ +KID+SFV + + A+ A+ + +++NL V+AEG+E + Sbjct: 791 GTGYSSLAYLKKFPIQYLKIDRSFVRDVIIDPNDAAIATAVIDLARNMNLNVIAEGIEQQ 850 Query: 760 EQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 +Q + L C QGY FSRP+PA E + Sbjct: 851 DQHQFLLDRGCGYGQGYLFSRPIPAHEFEQLL 882 Score = 43.9 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 31/283 (10%), Positives = 86/283 (30%), Gaps = 31/283 (10%) Query: 13 IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEY 72 L+ + + + N + E L R+++IG+ ++P Sbjct: 175 FLQSLLDAIPNPVFYKDLDSRYLGCNRSYEDLLRKSRQDIIGHRAADVMPPLRAVVAIRE 234 Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRDASVEMA 130 + +R + E +E+ D + F + + + ++D S Sbjct: 235 DNKVYDSALSR----TYESTIEEPDHGTMQVLFNKAPFFDQDGELAGLVGTIQDIS---- 286 Query: 131 QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMF-------GYCISEASGMQPDT 183 R++ A+ L + + + + F G E + T Sbjct: 287 ---SLREMQSAMQSLVESTVGFTGSNCYRRVAQQLCQWFDADCAIVGRIQEEGKVLSLAT 343 Query: 184 L---LNIPEFP------ADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 + +++P + ++ + + + + + + + +P+ D Sbjct: 344 IQDGVSMPSYSFNLSDTPCEKVVDEGMCLMSEGVMEHYPNCSLVTQMHAEGYVGTPIRDH 403 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI 277 + ++ S + + + ++LA M + EI Sbjct: 404 NGEVLGVLSVLS--RGKIKSLERAKDVLAIMAARVSAEIEREI 444 >UniRef50_A4BQ25 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQ25_9GAMM Length = 818 Score = 775 bits (2003), Expect = 0.0, Method: Composition-based stats. Identities = 180/687 (26%), Positives = 322/687 (46%), Gaps = 27/687 (3%) Query: 127 VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 + ++Q ++L A++ V + +P+ I N AF + G+ EA +L Sbjct: 128 ERVRAQKQLQKLSRAIEQTAECVFITNPDGIIEYVNPAFERLTGFTSEEAM-RNSPRILR 186 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 + A + + L + + + G + + I+P+ D + + V T Sbjct: 187 SGQHSASFYRDMWRTLKDGGVFRGMVINRRKNGALFYEEKVITPIKDSNGVITHFVSTGQ 246 Query: 247 DITEERQIRQLEGNILAAMCSSPPFHEMGEIIC---------RNIESVLNESHVSLFALR 297 +I++ + + + A + ++ F + ++ R++ + E V + L Sbjct: 247 NISDRMEAETIRKRLTATLEATTDFVAIADLQGHLLYANAARRSVLGLAPEDKVGICTLS 306 Query: 298 NGMPIHWASSSHGAEI---QNAQSWSATI--RQRDGAPAGILQIKTSSGAETSAFIERVA 352 +G ++ I +WS + RDG + ++ + ++ + Sbjct: 307 DGHTEWASAKLMSKAIPTAMQEDTWSGELALIDRDGLEIPVSEVIIAHRG-PDGEVQFFS 365 Query: 353 DISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYL 408 I+++++ E+++ + + D +T LPNR+ L + + + A V Sbjct: 366 AIARNIS----ERKRLEEELAYRASHDALTCLPNRSLLLDRMQQALAYARRYNHRVGVLF 421 Query: 409 IGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN-DVSNI 467 + +D + + D+LG+ D L V R + ++ + R G +FV+++ + D +++ Sbjct: 422 VDLDRFKRINDTLGHHAGDTILRTVAERICQGVRRSDTVSRHGGDEFVVIAAQVFDSNDL 481 Query: 468 TQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGN 525 I ++R VS+PI + ++ LT SIGI+ G++ D LL A AM ++NG N Sbjct: 482 ASIVSKIRKTVSEPIKVKNRQVVLTCSIGIALYPFDGEDTDTLLKNADTAMYQAKENGRN 541 Query: 526 GWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPL 585 +Q+++ MN E L L L+ A+ + L YQPQ+ +TG L +EAL RW P Sbjct: 542 DFQYYTKEMNAQSHEMLNLEEELRRAVKAGEFVLHYQPQVDLQTGALSRLEALIRWQHPE 601 Query: 586 HGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQ 645 G + P FIP+ EE G IE +G WV+ EA RQ A W+ + ++VNLS F + Sbjct: 602 RGMLAPGTFIPVLEETGLIEPVGEWVVREAVRQCAVWKEMELPPVTVAVNLSVRQFANLN 661 Query: 646 LPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSG 705 + + + GI L +EITES++M + + ++ L G+ ++VDDFGTG+ Sbjct: 662 IAEAIERIVTEAGIPPACLELEITESVLMADAFDGAEALRALSQRGLRVAVDDFGTGYCA 721 Query: 706 LSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEML 765 L L LPV +K+D SFV + A++ AI ++G L VVAEGVET Q L Sbjct: 722 LHYLRRLPVNTLKVDHSFVSDLEGDPTTAAIVSAIITLGHDLGCKVVAEGVETLAQCNHL 781 Query: 766 RKIHCRVIQGYFFSRPLPAEEIPGWMS 792 ++ C + QGY + RP P EEI + Sbjct: 782 HRLGCDLAQGYLYYRPCPPEEIEPLLQ 808 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 38/248 (15%), Positives = 89/248 (35%), Gaps = 6/248 (2%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 A+EQ + N + + + NPA E+L G+ EE + N+ +L H Sbjct: 139 LSRAIEQTAECVFITNPDGIIEYVNPAFERLTGFTSEEAMRNSPRIL----RSGQHSASF 194 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLALVRDASVEMAQ 131 + + +K+G+ + ++ + V ++++ ++ S M Sbjct: 195 YRDMWRTLKDGGVFRGMVINRRKNGALFYEEKVITPIKDSNGVITHFVSTGQNISDRMEA 254 Query: 132 KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFP 191 + ++L ++ V + D + H++ N A + G + G+ + + Sbjct: 255 ETIRKRLTATLEATTDFVAIADLQGHLLYANAARRSVLGLAPEDKVGICTLSDGHTEWAS 314 Query: 192 ADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEE 251 A + + E L+ R G +I + I +Q +I+E Sbjct: 315 AKLMSKAIPTAMQEDTWSGELALIDRDGLEIPVSEVIIAHRGPDGEVQFFSAIARNISER 374 Query: 252 RQIRQLEG 259 +++ + Sbjct: 375 KRLEEELA 382 >UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWZ7_9PROT Length = 1217 Score = 774 bits (2000), Expect = 0.0, Method: Composition-based stats. Identities = 225/874 (25%), Positives = 380/874 (43%), Gaps = 87/874 (9%) Query: 5 DADNAADGIFFPALEQNMMGAVLIN-ENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 D + F Q +G LI+ N + NP ++ G EE+ + + Sbjct: 338 DVIRLSQERFATIFRQAPLGMALIDSLNGTIHELNPRFAEIAGRSVEEMKAVDWMSITHP 397 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLAL 121 + A + + G R+ G + E + + D S +W R ++ + E +L + Sbjct: 398 EDVQADLDNMALMNAG---RIPGFTMEKRYFRPDRSIVWVRMTIAPLRGEKGSSPQHLCM 454 Query: 122 VRDASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 + D + E R+ L ++H V D + + CN AF G E Sbjct: 455 IEDITERKQADEALRESKDLLRSIIEHAPIRVFWKDAQSRYLGCNSAFAHDAGLTQPEEL 514 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLW-KTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 + D + E R +++ A+ E T G IW++ S P+ Sbjct: 515 VGKSDFDMGWREQAELYRTDDHRVMASGEAKLGFEEPQTTPEGRHIWLRTSKVPLRSAAG 574 Query: 237 HLQNLVMTFSDITEERQIRQLEGN--------------ILAAMCSSPPFHEMGEIICRN- 281 L L+ + DIT+ ++ ++ A + EM +I + Sbjct: 575 ELFGLLGIYEDITQRKEAELELLQANRALRTISACNSVLVHARDETNLLQEMCRVIVKTG 634 Query: 282 ---------IESVLNESHVSL------FALRNGMPIHWA-----SSSHGAEIQNAQS--- 318 E +S + + + I WA G I+ + Sbjct: 635 GYLMAWVGIAEHDAGKSVRPVGQSGYEEGYLDSVNITWADTELGRGPTGTAIRTGKKVVN 694 Query: 319 -----------WSATIRQR------------DGAPAGILQIKTSSGA-----ETSAFIER 350 W +R A +L I + E + E Sbjct: 695 QDCLNNPKMAPWREQAIKRGYQSSIALPLAISKAEMAVLTIYAAEPDAFNLDEVALLEEL 754 Query: 351 VADISQHMAALALE--QEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----P 404 +D++ + AL +++ ++ + D +TG+PNR LH+ + + A Sbjct: 755 ASDLAYGIGALRTRVAHKEAEDRLDFMAHHDALTGMPNRILLHDRFEQVAATARRRGSNV 814 Query: 405 VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-ND 463 + + +D V D LG + AD L++VV R ++ + R G +F+++ + D Sbjct: 815 AMLFLNLDDFHLVNDVLGRSLADHMLVQVVERLHGCIRESDTISREGGDEFIILLGDVGD 874 Query: 464 VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRK 521 ++ I I ++ + S+P +DD +T SIGIS G++ + L+S + A+ + Sbjct: 875 LAAIEIIVQKILDAFSEPFTVDDHIVSVTSSIGISIFPNDGRDFNRLISQSEAALQKAKA 934 Query: 522 NGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARW 581 G + + FF+ MN E + L L+ AI N + ++ YQPQI + G EAL RW Sbjct: 935 AGKDTYNFFTEQMNINALEHMQLQGQLRHAIINQEFRIYYQPQIDTLNERMIGAEALVRW 994 Query: 582 HDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN-IHIPALSVNLSALH 640 P HG VPP +FIPLAE G I +G WV+ EACRQ WR +N + ++VNLSA+ Sbjct: 995 QHPQHGLVPPLKFIPLAERSGLIIPLGEWVLNEACRQAQVWRKRNRMPSMVMAVNLSAVQ 1054 Query: 641 FRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFG 700 F+ + V A+ G+ L +E+TES++++ + + + L+D+G+ LS+DDFG Sbjct: 1055 FKRGNIVETVIQALERSGLPAENLELELTESILLDDVEVVMETLHRLKDIGIKLSIDDFG 1114 Query: 701 TGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKE 760 TG+S LS L L V ++KID+SFV + + A++ AI +G +L LTV+AEGVET+ Sbjct: 1115 TGYSSLSYLKRLAVDKLKIDQSFVRDMVVDPEDAAIVSAIIQLGHTLQLTVIAEGVETRA 1174 Query: 761 QFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 Q ++L+ + C +QGY FSRP+PAE+ G Sbjct: 1175 QLQLLKSLECNEVQGYLFSRPIPAEDFSGLFEQA 1208 Score = 88.2 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 56/387 (14%), Positives = 119/387 (30%), Gaps = 33/387 (8%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGY-KREEVIGNNIDMLIPRDLR 66 + F ++ + + ++ ++ N AA KL+G + E++IG + + D Sbjct: 89 RRGEEQFKALMDVSPEAIAV-HQGGLWVYANDAAAKLFGGKQPEDIIGRQVMEFVHPDDH 147 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDAS 126 E +R EG E +L + G+ I + +GK + + RD Sbjct: 148 IVVQERMRQLFEG---EALTPKLEERLLQPGGTSILAEVYALRTEFDGKPAVMVVARDID 204 Query: 127 VEMAQKEQTRQLIIAVDHLDR----PVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPD 182 + + ++ + + R LD + + + +FG + Sbjct: 205 ERRRAELELQRSELRLKEAQRVAHLGSWELDLLENSLWWSDENYRIFGVEPGSVNTYDTF 264 Query: 183 TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 P+ + E LL G W+ Y Sbjct: 265 LATVHPDDKVYVDRAYTASVKNRTPYNIEHRLLLPDGLVKWVNERCETYYHDDGTPLRSA 324 Query: 243 MTFSDITEERQ----IRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNE-SHVSLFALR 297 T DITE R IR + +P + + + I + + ++ ++ Sbjct: 325 GTTLDITESRHSADVIRLSQERFATIFRQAPLGMALIDSLNGTIHELNPRFAEIAGRSVE 384 Query: 298 NGMPIHWASSSHGAEIQ--------------NAQSWSATIRQRDGAPAG----ILQIKTS 339 + W S +H ++Q + + D + I ++ Sbjct: 385 EMKAVDWMSITHPEDVQADLDNMALMNAGRIPGFTMEKRYFRPDRSIVWVRMTIAPLRGE 444 Query: 340 SGAETSAFIERVADISQHMAALALEQE 366 G+ + + DI++ A +E Sbjct: 445 KGSSPQH-LCMIEDITERKQADEALRE 470 Score = 82.8 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 47/393 (11%), Positives = 112/393 (28%), Gaps = 33/393 (8%) Query: 10 ADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAH 69 ++ A +G+ ++ + ++++ +++G + V N + P Sbjct: 216 SELRLKEAQRVAHLGSWELDLLENSLWWSDENYRIFGVEPGSV---NTYDTFLATVHPDD 272 Query: 70 PEYIRHNREGGKARVEGMSRELQLEKKDGSKIWT-RFALSKVSAEGKVYY-LALVRDASV 127 Y+ + E +L DG W + +G D + Sbjct: 273 KVYVDRAYTASVKNRTPYNIEHRLLLPDGLVKWVNERCETYYHDDGTPLRSAGTTLDITE 332 Query: 128 EMAQKE----QTRQLIIAVDHLDRPVIVLDP-ERHIVQCNRAFTEMFGYCISEASGMQPD 182 + + + ++D I + N F E+ G + E + Sbjct: 333 SRHSADVIRLSQERFATIFRQAPLGMALIDSLNGTIHELNPRFAEIAGRSVEEMKAVDWM 392 Query: 183 TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 ++ + + AD + E +W++ +I+P+ + Sbjct: 393 SITHPEDVQADLDNMALMNAGRIPGFTMEKRYFRPDRSIVWVRMTIAPLRGEKGSSPQHL 452 Query: 243 MTFSDITEERQIRQLEG---NILAAMCSSPPFH-----EMGEIIC-----------RNIE 283 DITE +Q + ++L ++ P + E Sbjct: 453 CMIEDITERKQADEALRESKDLLRSIIEHAPIRVFWKDAQSRYLGCNSAFAHDAGLTQPE 512 Query: 284 SVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKT---SS 340 ++ +S + A + + +G + K S+ Sbjct: 513 ELVGKSDFDMGWREQAELYRTDDHRVMASGEAKLGFEEPQTTPEGRHIWLRTSKVPLRSA 572 Query: 341 GAETSAFIERVADISQHMAALALEQEKSRQHIE 373 E + DI+Q A LE ++ + + Sbjct: 573 AGELFGLLGIYEDITQRKEAE-LELLQANRALR 604 Score = 53.5 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 57/164 (34%), Gaps = 7/164 (4%) Query: 99 SKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHI 158 ++W R + + G ++ + DA + + Q +D + V Sbjct: 57 HEMWMRMFIVCM-FLGFGFFTQRIDDARMRAEIRRGEEQFKALMDVSPEAIAV-HQGGLW 114 Query: 159 VQCNRAFTEMF-GYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTA-RDQDEFLLLT 216 V N A ++F G + G Q ++ P+ + R++QL A + E LL Sbjct: 115 VYANDAAAKLFGGKQPEDIIGRQVMEFVH-PDDHIVVQERMRQLFEGEALTPKLEERLLQ 173 Query: 217 RTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGN 260 G I + + + +++ DI E R+ Sbjct: 174 PGGTSILAE--VYALRTEFDGKPAVMVVARDIDERRRAELELQR 215 >UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B7KEN2_CYAP7 Length = 1471 Score = 774 bits (2000), Expect = 0.0, Method: Composition-based stats. Identities = 203/812 (25%), Positives = 378/812 (46%), Gaps = 52/812 (6%) Query: 13 IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEY 72 + ++ + I+ N ++ N E++ G+ EE+ N+++L P +Y Sbjct: 674 LLQTIVDYIPVMLAYIDPNYNFLWVNEEFERILGWSLEEI--KNLNILAQLYPDPDERQY 731 Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSKI---WTRFALSKVSAEGKVYYLALVRDASVEM 129 + + + + + E L+ +G+ I W LS + G + + + + Sbjct: 732 VMNYIQSAEEKWEDFKTRLR----NGTTIDTSWANVKLSNGAIIGIGQDITVRKHIEEAL 787 Query: 130 AQKEQTRQLIIAVDHLDRPVIVLDPER-HIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 + EQ +L+ + P+ V D + ++ N+A E +GY E GM + Sbjct: 788 RESEQKYRLLFYAN--PNPLWVYDVKTLAFLEVNQAAIEHYGYSREEFLGMTLRDIRPSE 845 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTR-TGEKIWIKASISPVYDVLAHLQNLVMTFSD 247 + + ++ + + GE I ++ + + A Q ++ +D Sbjct: 846 DVKILETYI---ANINPSFNRSGYWQHRKSNGEIIDVEITSHGI--EFAGRQARLVLVND 900 Query: 248 ITEE----RQIRQLEGNILAAMCSSP----PFHEMGEIICRN--IESVLNESHVSLFALR 297 ITE+ +++++ E A+ +P E GEII N + +H + + Sbjct: 901 ITEQLKAQQKLQESENRFRRAVIDAPLPILIHAEDGEIIQVNHAWTELTGYTHEDIPTIA 960 Query: 298 NGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPA-GILQIKTSSGAE-----TSAFIERV 351 + W ++G + +S + + DG G I +G +SA + R+ Sbjct: 961 D-----WTEKAYGERKEIVRSVIDELYKIDGKVEEGEFTITIKTGETRIWNFSSAPLGRL 1015 Query: 352 ADISQHMAALAL---EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----- 403 AD + + ++AL E++++ + + D +TGLPNR L + ++ + + Sbjct: 1016 ADNRRLIMSMALDITERKQAEEQLRHAAVHDQLTGLPNRILLLDRIEQAIKRTQQEEKYL 1075 Query: 404 PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-N 462 + I +D + V DSLG+ DQ L + ++ + ++P + R G +FV++ Sbjct: 1076 FALLFIDLDRFKVVNDSLGHWVGDQLLGAIADKLKACVRPMDTVARFGGDEFVILLENLT 1135 Query: 463 DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLG--KNRDYLLSTAHNAMDYIR 520 + T++A ++ + + + + F +++SIGI++ ++ LL A AM + Sbjct: 1136 SRTEATKMAQQITDELRSSFCLQGQDFFISVSIGITFPSSYEESASELLRNADIAMYRAK 1195 Query: 521 KNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALAR 580 + G + F M+ L L L+ A+ +L + YQP + TG+L G EAL R Sbjct: 1196 EKGRARYTIFDSKMHIQATRLLELETNLRLALEREELIVHYQPIVSLTTGKLLGFEALVR 1255 Query: 581 WHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ--NIHIPALSVNLSA 638 W P G + P FIP+AEE G I +G WV+ E+CRQ+ W+ + + +SVNLS Sbjct: 1256 WEHPKKGLISPGEFIPIAEETGLIIPLGEWVLLESCRQMKAWQKEFSGLDKIRVSVNLSG 1315 Query: 639 LHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDD 698 L N + + G++G L +EITESM+M + + + ++ + +S+DD Sbjct: 1316 KQLEYPHLINCLESILKQTGLEGKNLKLEITESMLMNNKEVVSDLLLQIKGKNIQISIDD 1375 Query: 699 FGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVET 758 FGTG+S LS L LPV +KID+SFV+R ++EAI ++ L + VVAEGVET Sbjct: 1376 FGTGYSSLSYLHYLPVDTLKIDRSFVNRMTQLGENFEIVEAIINLAHHLQMDVVAEGVET 1435 Query: 759 KEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 ++ + L+++ C QGYFFS+PL ++++ W Sbjct: 1436 EQHIKQLKQLGCESGQGYFFSKPLDSQKVTSW 1467 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 62/403 (15%), Positives = 141/403 (34%), Gaps = 47/403 (11%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A ++ + +E+ + ++ + + + GY +E+ L + Sbjct: 283 ALMESEAKYERLVERLPAVIYQFSPTKGKLYCSSYVKSILGYSTDEI------DLPWLWI 336 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKD--GSKIWT-RFALSKVSAEGKVYYLALV 122 HPE + +E + V+G + E++ KD G W ++ + +A+ ++ + Sbjct: 337 NSIHPEDLPKVKEMIQEFVQGKNFEIEYRVKDAQGQWHWILDRSIGRQAADQEMMIEGVA 396 Query: 123 RDASV----EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 D + +MA ++ + L VD+ VI D + + + + ++FG+ E G Sbjct: 397 IDITETKKTQMALQQAHQCLTFHVDNSPLGVIEWDNDYRVKRWSSQAEKIFGWKEEEVVG 456 Query: 179 MQPDT--LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 + + + + +T+R T+TGE I K S YD Sbjct: 457 KGWQEWQFVYEEDLDLIVAKVSEIIKKETSRHFVTNRNYTKTGEIIDCKWYNSVQYDQSG 516 Query: 237 HLQNLVMTFSDITEERQ----IRQLEGNILAAMCSSPPFH-----EMGEIICRNIE---- 283 + +++ D++E+++ ++ + + A+ S + GEI C Sbjct: 517 EILSILSLVLDVSEQKRAEAALQVSQERLQLALEGSGDSIWEWNLQTGEIYCDQSWWQKL 576 Query: 284 ------SVLNESHVSLFALRNGMPIHWAS-SSHGAEIQNAQSWSATIRQRDGAPAGILQ- 335 ++ +PIH AS + A + I+ G + Sbjct: 577 GYEPDHETMSYEWWRSQVAPEFLPIHEASLQDYLAGKTEYLTLEYKIQSSSGDWVWMSAR 636 Query: 336 ---IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQL 375 + + DI+ E ++ + ++Q Sbjct: 637 GKSVANDEEGNPLKIVGTHRDIT--------ESKEIEEELKQQ 671 Score = 89.3 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 53/398 (13%), Positives = 126/398 (31%), Gaps = 43/398 (10%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKR--EEVIGNNIDMLIPR 63 A + ALE + N ++ + + + GY+ E + + Sbjct: 537 ALQVSQERLQLALEGSGDSIWEWNLQTGEIYCDQSWWQKLGYEPDHETMSYEWWRSQVAP 596 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRF---ALSKVSAEGKVYYLA 120 + P H ++ G + + E +++ G +W +++ + + Sbjct: 597 EFLPIHEASLQDYLAGKTEYL---TLEYKIQSSSGDWVWMSARGKSVANDEEGNPLKIVG 653 Query: 121 LVRDASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 RD + +E+ +Q L VD++ + +DP + + N F + G+ + E Sbjct: 654 THRDITESKEIEEELKQQGELLQTIVDYIPVMLAYIDPNYNFLWVNEEFERILGWSLEEI 713 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 + +L D R + + ++F R G I + + + Sbjct: 714 KNLN---ILAQLYPDPDERQYVMNYIQSAEEKWEDFKTRLRNGTTIDTSWANVKLSNG-- 768 Query: 237 HLQNLVMTFSDITEERQIRQLEGN-------ILAAMCSSPPFHEMGEI------------ 277 ++ DIT + I + + A + +++ + Sbjct: 769 ---AIIGIGQDITVRKHIEEALRESEQKYRLLFYANPNPLWVYDVKTLAFLEVNQAAIEH 825 Query: 278 ICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGI-LQI 336 + E L + + + + ++ + W R+ +G + + Sbjct: 826 YGYSREEFLGMTLRDIRPSEDVKILETYIANINPSFNRSGYWQH--RKSNGEIIDVEITS 883 Query: 337 KTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQ 374 A A + V DI++ + A QE S + Sbjct: 884 HGIEFAGRQARLVLVNDITEQLKAQQKLQE-SENRFRR 920 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 56/158 (35%), Gaps = 6/158 (3%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 +K ++ F A+ + ++ E+ E++ N A +L GY E++ I Sbjct: 905 LKAQQKLQESENRFRRAVIDAPLPILIHAEDGEIIQVNHAWTELTGYTHEDI--PTIADW 962 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS--AEGKVYY 118 + E K + E + K G F+ + + A+ + Sbjct: 963 TEKAYGERKEIVRSVIDELYKIDGKVEEGEFTITIKTGETRIWNFSSAPLGRLADNRRLI 1022 Query: 119 LALVRDASVEMAQKEQTRQL--IIAVDHLDRPVIVLDP 154 +++ D + +EQ R + L +++LD Sbjct: 1023 MSMALDITERKQAEEQLRHAAVHDQLTGLPNRILLLDR 1060 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 50/163 (30%), Gaps = 2/163 (1%) Query: 114 GKVYYLALVRDASV-EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYC 172 G+ YL + + A K+ + V+ + P+ + N A+ F Sbjct: 108 GRQLYLGQLNILKKIKQALKKSRSRYRAIVEEQTELICRFRPDGTLTFVNEAYYRYFEKT 167 Query: 173 ISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVY 232 L+ P+ L+ L + E ++ +GE W + + + Sbjct: 168 PEYLLEKIFLPLIPFPDQQQVLDN-LKSLNQQKRVITHEHRVIISSGEMRWHQWTNRAIV 226 Query: 233 DVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMG 275 D + DITE +QI + + + Sbjct: 227 DRQGKIIEFQAVGRDITELKQIETALRELNEELEQRVEQRTLQ 269 Score = 55.4 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 54/436 (12%), Positives = 127/436 (29%), Gaps = 69/436 (15%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 K+ A + + +E+ + + F N A + + E ++ LI Sbjct: 121 KIKQALKKSRSRYRAIVEEQTELICRFRPDGTLTFVNEAYYRYFEKTPEYLLEKIFLPLI 180 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGK-VYYL 119 P + + ++ + + ++ E ++ G W ++ + +GK + + Sbjct: 181 PFPDQQQVLDNLKSLNQ----QKRVITHEHRVIISSGEMRWHQWTNRAIVDRQGKIIEFQ 236 Query: 120 ALVRDASVEMAQKEQTRQL------------------------------------IIAVD 143 A+ RD + + R+L V+ Sbjct: 237 AVGRDITELKQIETALRELNEELEQRVEQRTLQLEAQIQERQAVEKALMESEAKYERLVE 296 Query: 144 HLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLW 203 L + P + + C+ + GY E + + +I + Q Sbjct: 297 RLPAVIYQFSPTKGKLYCSSYVKSILGYSTDE-IDLPWLWINSIHPEDLPKVKEMIQEFV 355 Query: 204 KTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILA 263 + + E+ + G+ WI + + DITE ++ + Sbjct: 356 QGKNFEIEYRVKDAQGQWHWILDRSIGRQAADQEMM-IEGVAIDITETKKTQMALQQAHQ 414 Query: 264 AMCSSPP------------------FHEMGEIICRNIESVLNESHVSL-FALRNGMPIHW 304 + + +I E V+ + F + + Sbjct: 415 CLTFHVDNSPLGVIEWDNDYRVKRWSSQAEKIFGWKEEEVVGKGWQEWQFVYEEDLDLIV 474 Query: 305 ASSSHGAEIQNAQSWSA-TIRQRDGAPA---GILQIKTSSGAETSAFIERVADISQHMAA 360 A S + + ++ + + G ++ E + + V D+S+ A Sbjct: 475 AKVSEIIKKETSRHFVTNRNYTKTGEIIDCKWYNSVQYDQSGEILSILSLVLDVSEQKRA 534 Query: 361 LALEQEKSRQHIEQLI 376 A Q S++ + QL Sbjct: 535 EAALQV-SQERL-QLA 548 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 773 bits (1998), Expect = 0.0, Method: Composition-based stats. Identities = 199/718 (27%), Positives = 316/718 (44%), Gaps = 55/718 (7%) Query: 118 YLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 + D S E ++ L +D + V ++D E +V CN F + + + Sbjct: 108 DAGIAADNSGENEVVQRAAMLETILDSIPCAVSLVDRELQLVACNEEFKRLLDFPPHLFA 167 Query: 178 GMQPD--TLLNIPEF-----PADNRIRLQQLLWKTARDQDE-FLLLTRTGEKIWIKASIS 229 G P TL P D + LL + F R G + I+ Sbjct: 168 GSLPSLETLFRYNAARGEYGPGDPDEVVASLLARALHPAPHSFERRRRDGTVLLIQGRPL 227 Query: 230 PVYDVLAHLQNLVMTFSDITEER---QIRQLEGNILAAMCSSPPFHEMGEIICRNIESVL 286 P V T++DIT + + QL + + ++G I + Sbjct: 228 P-------QGGFVTTYTDITARKRDKERLQLADKVFENSREAIVITDLGHRIVSVNPAYT 280 Query: 287 NESHVSLFALRN----------------GMPIHWASSSHGAEIQNAQSWSAT---IR--- 324 + ++ A + S + A + SWS +R Sbjct: 281 EITGIAATAAQGTCFRPGSDDGDSGEEGEGAGGPDSRTVWAIVGEHGSWSGETTGVRCGG 340 Query: 325 QRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGL 384 QR I ++ E + FI +DI+ ++++ I+ L D +TGL Sbjct: 341 QRYPRTLMINGVRDPETREITHFIAIFSDITA--------RKRAEADIQHLAYHDTLTGL 392 Query: 385 PNRNNLHNYLD----DLVDKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREK 440 NR +L L + V + +D + + DSLG+ D+ L +V R R+ Sbjct: 393 ANRFSLTARLQLSVAEARRNGQRLAVMFLDLDRFKHINDSLGHPVGDELLKQVARRLRDA 452 Query: 441 LKPDQYLCRIEGTQFVLVSL-ENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY 499 ++ + R+ G +FV+V ++T +A +L +S P +D T SIGIS Sbjct: 453 VRETDTVARLGGDEFVVVLQGIGGAHDVTHVAAKLLAQLSAPYCVDTTELHTTASIGISL 512 Query: 500 --DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQL 557 D + L+ A AM + + G +QF++ MN RL L L+ A++ + Sbjct: 513 FPDDSADPAALMRNADTAMYHAKAAGRAKFQFYTDEMNRAATARLDLERKLRGAVARGEF 572 Query: 558 KLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACR 617 +L YQPQ + G L G+EAL RW P G + P RFIPLAEE G I IG WV+ EACR Sbjct: 573 ELWYQPQFDSRHGHLTGLEALVRWRHPQDGLIAPLRFIPLAEETGVIVEIGTWVLREACR 632 Query: 618 QLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHD 677 Q +W + +SVNLS R L + V + A G+ L +EITES +M++ Sbjct: 633 QARQWLDAGLPELRISVNLSVRQLREKCLVDTVWTTLAASGLRPGLLELEITESAVMDNP 692 Query: 678 TEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALL 737 E +Q L+++GV +++DDFGTG S LS L P+ +KID+SF+ + ++ Sbjct: 693 DEAVALLQALKNLGVRIAIDDFGTGHSSLSYLKLFPLDHLKIDRSFISDIEHDANDTMIV 752 Query: 738 EAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 A S+ +L L+V+AEGVE+ Q LR++ C +QG+ FSRP+ A+ + + SV Sbjct: 753 AAAVSLAHNLGLSVIAEGVESAVQVARLRELGCDELQGFHFSRPVTADVVENLLRSVW 810 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 773 bits (1997), Expect = 0.0, Method: Composition-based stats. Identities = 178/690 (25%), Positives = 315/690 (45%), Gaps = 36/690 (5%) Query: 128 EMAQKEQTRQLIIAVDHLDRPVIVL----DPERHIVQCNRAFTEMFGYCISEASGMQPDT 183 E +++E +L D L + D + A E++ + + Sbjct: 779 EASRQEALDRLQKIADRLPGVIYQFRLMPDGTSSFPFASDALYEIYRVKPEDVTEDSSKV 838 Query: 184 L-LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 + PE D + +++ E+ + + + W+ + P + Sbjct: 839 FEVIHPEDVDDVQKSIEESAEHLTPWYQEYRVRFKNDDVRWLSGNAMPEKQPDGSILWH- 897 Query: 243 MTFSDITEERQIRQLEG---NILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNG 299 +DI++ ++ + + + I E+ S S+ Sbjct: 898 GFITDISQHKKTEAQIELASKVFEQSREGIMITDSNQKILMVNEAFSEISGYSVEETLGK 957 Query: 300 MPIHWASSSHGAE--------IQNAQSWSATI--RQRDGAPAGILQIKT---SSGAETSA 346 P AS H E I+ W I R+++G + + + Sbjct: 958 TPRMLASGRHSREFYQNVWKSIKEKGHWQGEIWNRRKNGEIFPEWLSISRGLDTSGNVTE 1017 Query: 347 FIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS--- 403 ++ DIS+ ++S + I+ L +DP+TGL NR L + L+ + A Sbjct: 1018 YVGIFNDISKV--------KESEEKIKHLAHYDPLTGLVNRELLMDRLNHSISTADRNNT 1069 Query: 404 -PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN 462 + I +DH ++V D+LG+ DQ L+EV R + L+ + + R G +F++V + Sbjct: 1070 PLALLFIDLDHFKNVNDTLGHQVGDQLLIEVGQRILKILRDEDTIARQGGDEFIVVLPDT 1129 Query: 463 DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIR 520 + +A+++ +S + + +T SIGI+ GK+ D LL A AM + Sbjct: 1130 GENGAVHVAEKILESISDQLNLKPYKLFITPSIGIAVYPQDGKDADSLLKNADTAMYQAK 1189 Query: 521 KNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALAR 580 +G N ++FF+ M + + +AL+ A+ + Q +L YQPQ A++G + G+EAL R Sbjct: 1190 NDGRNVYRFFTMEMQAHSSRIMQIESALRVALFDQQFELYYQPQTCAKSGSIIGVEALIR 1249 Query: 581 WHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALH 640 W+ P G V P FIP+AE+ G+I IG WV+ A RQ+ W ++VNLSA+ Sbjct: 1250 WNHPEMGPVSPQEFIPVAEQSGQILAIGWWVLRTAIRQIKIWSEHGKPCIKVAVNLSAVQ 1309 Query: 641 FRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFG 700 FR LP QV + G+ L +E+TES+ M + + + + L G+ +S+DDFG Sbjct: 1310 FRYEDLPKQVMKILEEEGVSPEFLELELTESVAMANPEAVIEMMDKLVGHGIKMSIDDFG 1369 Query: 701 TGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKE 760 TG+S LS L V+++KID+SF+ + +++EAI S+ ++L L +AEGVET+ Sbjct: 1370 TGYSSLSYLKRFKVSKLKIDQSFIRDLAVDSDDRSIIEAIISLSKALGLKTIAEGVETQA 1429 Query: 761 QFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 Q + L++ C IQG+++S+ L E + Sbjct: 1430 QLDFLQEKQCDEIQGFYYSKALTPEAFDAF 1459 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 91/234 (38%), Gaps = 4/234 (1%) Query: 29 NENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMS 88 + F + A +++ K E+V ++ + + P + ++ + E + Sbjct: 808 DGTSSFPFASDALYEIYRVKPEDVTEDSSKVF--EVIHPEDVDDVQKSIEESAEHLTPWY 865 Query: 89 RELQLEKKDGSKIWTRF-ALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDR 147 +E ++ K+ W A+ + +G + + + D S + Q + Sbjct: 866 QEYRVRFKNDDVRWLSGNAMPEKQPDGSILWHGFITDISQHKKTEAQIELASKVFEQSRE 925 Query: 148 PVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTAR 207 +++ D + I+ N AF+E+ GY + E G P L + + + + + + Sbjct: 926 GIMITDSNQKILMVNEAFSEISGYSVEETLGKTPRMLASGR-HSREFYQNVWKSIKEKGH 984 Query: 208 DQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNI 261 Q E + GE SIS D ++ V F+DI++ ++ + ++ Sbjct: 985 WQGEIWNRRKNGEIFPEWLSISRGLDTSGNVTEYVGIFNDISKVKESEEKIKHL 1038 Score = 112 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 59/348 (16%), Positives = 119/348 (34%), Gaps = 17/348 (4%) Query: 7 DNAADGIFFPALEQNMMGAVLINEN-DEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A+ + E +G +++ D+ + FN K+ Y +++ + + +I Sbjct: 345 KTEAEKVLQKFYELPFIGMAILDAQHDKWIRFNDRLPKILRYSSQDLAQKSFNEIIHPKD 404 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLALVR 123 E + + EG + EL L D S ++ + V E YYL V+ Sbjct: 405 ---LAEVNAQLTDIESGKSEGFTTELHLLASDDSIVFGTINVKCVRGENGRVQYYLMTVQ 461 Query: 124 DASVEMAQKE----QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 D + E QL V + V + D E + CN +F FG ++ G Sbjct: 462 DVTELKHLAELNIEHQNQLNALVHTIPDLVWLKDTEGLYLACNPSFERFFGAKEADIIGK 521 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 ++ + + + + +E+L + G + +P+ + + Sbjct: 522 TDYDFVDKALADFFRENDCNAMAAEESIENEEWLTFSENGYRGLFSTIKTPMKNEEGQVI 581 Query: 240 NLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNG 299 +V DI++ ++ + + E I R+ + + S V A+R G Sbjct: 582 GVVGVARDISKRKEDEAQLERLTKL---YSAMNHTNEAIIRSTDQLTLFSKVCEIAVREG 638 Query: 300 MPIHWASSSHGAEIQNAQSWSATIR-QRDGAPAGILQIKTSSGAETSA 346 + G + +R ++ L+I AET Sbjct: 639 ---GMKMAWIGTIDKETNLVHPVVRFGKNSEYLDGLEISIDETAETGQ 683 Score = 68.1 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 6/126 (4%) Query: 18 LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNR 77 EQ+ G ++ + N +++ N A ++ GY EE +G ML H N Sbjct: 920 FEQSREGIMITDSNQKILMVNEAFSEISGYSVEETLGKTPRMLASGR----HSREFYQNV 975 Query: 78 EGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYLALVRDASVEMAQKEQT 135 E+ +K+G W + ++ Y+ + D S +E+ Sbjct: 976 WKSIKEKGHWQGEIWNRRKNGEIFPEWLSISRGLDTSGNVTEYVGIFNDISKVKESEEKI 1035 Query: 136 RQLIIA 141 + L Sbjct: 1036 KHLAHY 1041 Score = 65.8 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 42/336 (12%), Positives = 107/336 (31%), Gaps = 43/336 (12%) Query: 100 KIW-TRFALSKVSAEGKVYYLALVRDASVEMAQK-----EQTRQLIIAVDHLDRPVIVLD 153 W + S + G + + L ++ +++ ++ E + L + + +LD Sbjct: 308 VFWIVLVSFSALFLIGIAFLIVLKKERDLQVLERYAEKTEAEKVLQKFYELPFIGMAILD 367 Query: 154 PER-HIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEF 212 + ++ N ++ Y + + + +++ + N K+ E Sbjct: 368 AQHDKWIRFNDRLPKILRYSSQDLAQKSFNEIIHPKDLAEVNAQLTDIESGKSEGFTTEL 427 Query: 213 LLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQI------RQLEGNILAAMC 266 LL ++ ++ V +Q +MT D+TE + + Q + N L Sbjct: 428 HLLASDDSIVFGTINVKCVRGENGRVQYYLMTVQDVTELKHLAELNIEHQNQLNALVHTI 487 Query: 267 SSPPFHEMGEII----CRNIESVLNESHVSLFA----------LRNGMPIHWASSSHGAE 312 + + E + + E + L + + ++ E Sbjct: 488 PDLVWLKDTEGLYLACNPSFERFFGAKEADIIGKTDYDFVDKALADFFRENDCNAMAAEE 547 Query: 313 IQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHI 372 + W +G IKT E I V +A ++++ + Sbjct: 548 SIENEEWLT--FSENGYRGLFSTIKTPMKNEEGQVIGVVG-----VARDISKRKEDEAQL 600 Query: 373 EQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYL 408 E+ +T L + N+ ++ + ++ + Sbjct: 601 ER------LTKL---YSAMNHTNEAIIRSTDQLTLF 627 >UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQI6_9GAMM Length = 955 Score = 773 bits (1996), Expect = 0.0, Method: Composition-based stats. Identities = 201/821 (24%), Positives = 359/821 (43%), Gaps = 51/821 (6%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A ++ + +E + E++F N + KL+G E+++G+N LIP Sbjct: 143 ALRESEQRYRGVVEDFPIMICTYKPGGEIIFVNQSYCKLFGRTSEDLVGSNFLDLIPEGD 202 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKD---GSKIWTRFALSKVSAEGKVY-YLAL 121 RPA + N G E ++ G + WT A+ + +G++ Y ++ Sbjct: 203 RPA----LISNISGLNTSKPTFVNEHRVILPGDNIGWQRWTNRAI--FNRQGEIESYQSI 256 Query: 122 VRDASVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERHI--VQCNRAFTEMFGYCISE 175 D + M Q+ QL + +L R+ + + E+FGY Sbjct: 257 GEDITQRMIQERALESSEAQLSTLIGNLPGVAFQCLNNRNWTMLYLSDRCEEIFGYTAES 316 Query: 176 ASGMQPDT--LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYD 233 + + L P + +Q L + + L +GE W++ V Sbjct: 317 LIKSRYCSYAQLIEPGYREYVWAAVQNSLKTQTPYKVLYKLKHSSGESRWMEEQGRGVST 376 Query: 234 VLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSS---PPFHEMGEIICRNIESVLNESH 290 L + D+TE + A S+ + I E+ + Sbjct: 377 DSTGLT-IEGYIEDVTERIEAENRLNQAAAVFRSTGEGVAITDQNGTIVDVNEAFTKITG 435 Query: 291 VSLFALRNGMPIHWASSSH--------GAEIQNAQSWSATI--RQRDGAPAG----ILQI 336 + S H +IQ W + R + G I I Sbjct: 436 FDRDEVIGKNTRILQSGKHDIAFYENMWEQIQKHGHWRGEVWNRAKSGTIYPEILTISAI 495 Query: 337 KTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDD 396 G + S ++ ADI+ +++ ++ L +D +T LPNR L Sbjct: 496 DFKKGQQPSGYVGVFADITS--------LKETEARLDHLAHYDALTELPNRLLFRERLIH 547 Query: 397 LV----DKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEG 452 + K V + +D +++ D+LG+ D L E+ +R R ++ + RI G Sbjct: 548 SLLMSERKKTKVAVLFLDLDRFKNINDTLGHGVGDILLAEIASRLRHVVRMGDTVGRISG 607 Query: 453 TQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIG--ISYDLGKNRDYLL 509 +F L+ + DV+++ I +++ +V S+ I I+ ++ SIG IS D + D LL Sbjct: 608 DEFCLILEDIQDVTDVVPIVEKILSVFSQTIQINSHMLQISASIGVAISPDNSNDADALL 667 Query: 510 STAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAET 569 S + +AM ++ G N ++F++ M + E + +AL++A+ +Q + YQPQ+ + Sbjct: 668 SFSDSAMYEAKEAGRNTYKFYTAEMTQQALEHSFVQSALRDALEQSQFFVTYQPQLRIKD 727 Query: 570 GELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHI 629 + G+EAL RW P G +PP FIP+AE G I +G W++ AC Q +W ++ ++ Sbjct: 728 YSMVGVEALVRWQHPERGLIPPDSFIPIAENSGLIRELGAWILRTACEQGVQWLNEQVNF 787 Query: 630 PALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRD 689 + VN+SA V + G +L +E+TES +M+ + ++ Sbjct: 788 GRIYVNVSATQLHDESFTEAVIMCLKETGFPAEKLGLEVTESFIMKDPQHAINVLSSFKE 847 Query: 690 MGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNL 749 +G+ L++DDFGTG+S LS L LP+ ++KID+SF+ + +A+ EA+ ++G++LNL Sbjct: 848 IGIELAIDDFGTGYSSLSYLKQLPIDKLKIDQSFIRDIPDDPNDMAIAEAVIAMGKALNL 907 Query: 750 TVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 V+AEGVE++ Q + L C +QGY ++ PL A+ W Sbjct: 908 EVIAEGVESQIQADFLLDKECTEVQGYLYAHPLTADAFSEW 948 Score = 101 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 59/397 (14%), Positives = 129/397 (32%), Gaps = 23/397 (5%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 K + + +F + ++ + V+ N A GY RE+ +G Sbjct: 9 KFLEKLKNSSDLFEIVFDHQFQFMAILEPDGRVISVNQVALSQQGYTREDFVGRYFWESA 68 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTR-FALSKVSAEGKV-YYL 119 P + + + + E DGS ++ ++GK+ YL Sbjct: 69 SWRHLPDWEAIWKKRLKAAYENRSPIFTDDVYEAHDGSIRHADAVTIALFDSDGKLNGYL 128 Query: 120 ALVRDASV----EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 D + E A +E ++ V+ + P I+ N+++ ++FG + Sbjct: 129 IQAIDKTDKAIAEKALRESEQRYRGVVEDFPIMICTYKPGGEIIFVNQSYCKLFGRTSED 188 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL 235 G L+ + PA + L +E ++ W + + +++ Sbjct: 189 LVGSNFLDLIPEGDRPALISN-ISGLNTSKPTFVNEHRVILPGDNIGWQRWTNRAIFNRQ 247 Query: 236 AHLQNLVMTFSDITEERQIRQLEGNI---LAAMCSSPPFHEMGEIICRNIESV-LNESHV 291 +++ DIT+ + + L+ + + P + RN + L++ Sbjct: 248 GEIESYQSIGEDITQRMIQERALESSEAQLSTLIGNLPGVAFQCLNNRNWTMLYLSDRCE 307 Query: 292 SLFALRNGMPIHWASSSHGAEIQNAQS---WSATIRQ-RDGAPAGILQIKTSSGAETSAF 347 +F I S+ I+ W+A + P +L S E+ Sbjct: 308 EIFGYTAESLIKSRYCSYAQLIEPGYREYVWAAVQNSLKTQTPYKVLYKLKHSSGESRWM 367 Query: 348 IERVADISQHMAALAL--------EQEKSRQHIEQLI 376 E+ +S L + E+ ++ + Q Sbjct: 368 EEQGRGVSTDSTGLTIEGYIEDVTERIEAENRLNQAA 404 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 40/276 (14%), Positives = 90/276 (32%), Gaps = 30/276 (10%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 + D+ K + I DH + + +L+P+ ++ N+ GY + G Sbjct: 4 MTNDSKFLEKLKNSSDLFEIVFDHQFQFMAILEPDGRVISVNQVALSQQGYTREDFVGRY 63 Query: 181 PDTL---LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 ++P++ A + RL+ + + + G A ++D Sbjct: 64 FWESASWRHLPDWEAIWKKRLKAAYENRSPIFTDDVYEAHDGSIRHADAVTIALFDSDGK 123 Query: 238 LQNLVMTFSDITE----ERQIRQLEGNILAAMCSSPPF--------------HEMGEIIC 279 L ++ D T+ E+ +R+ E + P ++ Sbjct: 124 LNGYLIQAIDKTDKAIAEKALRESEQRYRGVVEDFPIMICTYKPGGEIIFVNQSYCKLFG 183 Query: 280 RNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIR-----QRDGAPAGIL 334 R E ++ + + L + G S+ G + ++ R G Sbjct: 184 RTSEDLVGSNFLDL--IPEGDRPALISNISGLN-TSKPTFVNEHRVILPGDNIGWQRWTN 240 Query: 335 QIKTSSGAETSAFIERVADISQH-MAALALEQEKSR 369 + + E ++ DI+Q + ALE +++ Sbjct: 241 RAIFNRQGEIESYQSIGEDITQRMIQERALESSEAQ 276 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 773 bits (1996), Expect = 0.0, Method: Composition-based stats. Identities = 198/728 (27%), Positives = 338/728 (46%), Gaps = 55/728 (7%) Query: 102 WTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDPERH 157 WTR L ++ E + LAL D + ++ R+ +++ + Sbjct: 221 WTRAELKRLIDELRAKTLALESDIARRREVEDALRRSENKYRELFWSNLDGIVISSLDGQ 280 Query: 158 IVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTAR-DQDEFLLLT 216 ++ N AF + Y + + +L+ PE R L + + D+ E + Sbjct: 281 VIDANPAFLNLMCYSLDQLKLQNFWSLI-APESEGMERFNLDNKVLRFGYCDEFEASYIN 339 Query: 217 RTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER---QIRQLEGNILAAMCSSPPFHE 273 R G + + + D + + DI+E+R + QL + + Sbjct: 340 RFGNVVPVSVKTVAMRDSFGRINAVWRMVRDISEKRVAEERMQLAAKVFENTVEGIMITD 399 Query: 274 MGEIICRNIESVLNESHVSLFALRNGMPIHWASSSH--------GAEIQNAQSWSATI-- 323 + I + + + P +S H + I SW + Sbjct: 400 ADKRIRSVNRAFSQITGFGQQEVLGQKPDMLSSGRHDETFYEAMWSAINEHGSWQGELWN 459 Query: 324 RQRDGA----PAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFD 379 R+++G I ++ + G E + ++ +D+S E++ + + I+ L FD Sbjct: 460 RRKNGEVYPEWLAISAVRNAVG-EITHYVAIFSDLS--------ERKAADERIQFLAHFD 510 Query: 380 PMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVD------------HIQDVIDSLGYAWAD 427 +TGLPNR ++ + ++ + A D + + +SLG++ D Sbjct: 511 VLTGLPNRAHIQDRVELAIQNATR--------DNERLALLLLDLDRFKTINESLGHSAGD 562 Query: 428 QALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL-ENDVSNITQIADELRNVVSKPIMIDD 486 L + R R L + + R G +F+++ D + A+ +R V+ P+ + + Sbjct: 563 ALLQVLAERIRSTLLTGEVVARQGGDEFIVLLPLIADPGSAALAAERIREVLEPPVELFN 622 Query: 487 KPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVL 544 +T SIGIS D G++ + L+ A AM + + G N ++F++ +N +E L + Sbjct: 623 HSISITPSIGISVFPDDGRDFETLVRNADAAMYHAKSAGRNSYKFYTADLNARAREILEI 682 Query: 545 GAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEI 604 + L+ A+ ++ L YQPQ+ +TGE+ G EAL RW P G + P RFI +AEE G I Sbjct: 683 ESQLRYALDRDEFVLHYQPQVDLKTGEIIGAEALIRWQHPELGLLGPVRFIEVAEERGFI 742 Query: 605 ENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQL 664 IG WVI EACRQLA+WR Q + +L+VNLS L FR L + A+ A G+ G L Sbjct: 743 VQIGNWVIQEACRQLAQWRRQGLPRISLAVNLSTLQFRQQDLAVHLQRALSAHGLVGSDL 802 Query: 665 TVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFV 724 VE+TES++M+ I ++ MG+ LS+DDFGTG+S LS L ++KID+SFV Sbjct: 803 DVEVTESVIMDDVETTIHTIDRIKSMGLQLSIDDFGTGYSSLSYLKRFKADKLKIDRSFV 862 Query: 725 DRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPA 784 + A+ AI ++ ++LN+TV+AEGVET EQ++ L + C QGY ++P+PA Sbjct: 863 RDIPMDADDSAIARAIINMAKNLNMTVIAEGVETIEQWKFLDREGCHAAQGYLLAKPVPA 922 Query: 785 EEIPGWMS 792 +E + Sbjct: 923 KEFERLLE 930 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 52/292 (17%), Positives = 116/292 (39%), Gaps = 15/292 (5%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 ++ DA ++ + N+ G V+ + + +V+ NPA L Y +++ N LI Sbjct: 249 EVEDALRRSENKYRELFWSNLDGIVISSLDGQVIDANPAFLNLMCYSLDQLKLQNFWSLI 308 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKD--GSKIWTRF-ALSKVSAEGKVYY 118 + E + K G E + + G+ + ++ + G++ Sbjct: 309 APE-----SEGMERFNLDNKVLRFGYCDEFEASYINRFGNVVPVSVKTVAMRDSFGRINA 363 Query: 119 LA-LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 + +VRD S + +E+ + ++ +++ D ++ I NRAF+++ G+ E Sbjct: 364 VWRMVRDISEKRVAEERMQLAAKVFENTVEGIMITDADKRIRSVNRAFSQITGFGQQEVL 423 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 G +PD L + + + + Q E + GE +IS V + + Sbjct: 424 GQKPDML-SSGRHDETFYEAMWSAINEHGSWQGELWNRRKNGEVYPEWLAISAVRNAVGE 482 Query: 238 LQNLVMTFSDITEERQIRQLEG-----NILAAMCSSPPFHEMGEIICRNIES 284 + + V FSD++E + + ++L + + + E+ +N Sbjct: 483 ITHYVAIFSDLSERKAADERIQFLAHFDVLTGLPNRAHIQDRVELAIQNATR 534 >UniRef50_A7IPE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IPE4_XANP2 Length = 864 Score = 772 bits (1995), Expect = 0.0, Method: Composition-based stats. Identities = 267/846 (31%), Positives = 412/846 (48%), Gaps = 76/846 (8%) Query: 21 NMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGG 80 V ++E + F N AAE LWG ++G N ++ P LR +R E Sbjct: 16 ATDAVVFLDETGVITFVNAAAEHLWGLSAAAMVGRNARVVFPAALR--FDPALRWTME-- 71 Query: 81 KARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLII 140 + G ++ + + DGS + L++V GK Y A+V + L + Sbjct: 72 --DMVGADWQVVITRPDGSSAFALVRLAQVWHAGKAGYAAVVHAMPDPTGAAKHISILSL 129 Query: 141 AVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQ 200 + DR V+V D IV NRAF EM GY EA G + LL + D R+ Sbjct: 130 VAEKTDRGVVVTDARHRIVYTNRAFQEMLGYVEGEAEGRVLEDLLATGKGATDLAARISS 189 Query: 201 LLWKTARDQDEFLLLTRTGEKIWIKASISPVYD-VLAHLQNLVMTFSDITEERQIRQLEG 259 + + ++ L +G ++W+ A ++PV + V L+++V +DIT R + L+ Sbjct: 190 GIQRRMPFPEDVPLRGASGNEVWVSAIVTPVLNQVTGALEHVVAVLADITHARLMEDLQR 249 Query: 260 NILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALR---------------------N 298 +LAA+ + P ++ E++CR +E + S+ + Sbjct: 250 QVLAALAADAPARDILELLCRKVEELAPGVLCSIMGVTADDRLTVLAAPNLPAAFSAAVE 309 Query: 299 GMPIHWASSSHGAEIQNA---------------------------QSWSATIRQRDGAPA 331 G+ I S G WS R R G A Sbjct: 310 GLAIGPKCGSCGTSAFRGEAVMVEDITTSPLWEDFKDLVLPHGIKGCWSIPARLRGGKVA 369 Query: 332 GILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLH 391 + ++E V + AL LE+ ++R I L D +TGLPNR L Sbjct: 370 ATFAFYFPGPPFAAPWLESVVSACADLCALVLERSEARDRIATLASIDALTGLPNRRRLI 429 Query: 392 NYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYL 447 L DL+ +A V ++ VDH +DV ++LG++ D+ L+E+ R + +L+ + Sbjct: 430 ESLGDLIAEAAERDEPLAVMMLDVDHFKDVNETLGHSTGDELLVEMARRLQAQLRTGDTV 489 Query: 448 CRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNR 505 R G +FV+V + +IA L + +S PI ++ S+GI+ G + Sbjct: 490 GRTGGDEFVVVVHDCAAEEAARIARRLIDYLSAPIPAQKLHLTMSASVGIALYPQHGTSA 549 Query: 506 DYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQI 565 + LL A AM + +QFF+ +N+ V++RLVL AL+EA+ N L+LVYQPQ+ Sbjct: 550 ETLLRHADTAMYEAKSKARGRFQFFTEDLNKRVEDRLVLSVALREAVQNQALRLVYQPQV 609 Query: 566 FAE---------------TGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRW 610 G L+G+EALARW DP+HG VP RFI LAEE G IE+I +W Sbjct: 610 TLAKVTLSNDTPSNGTLAGGALHGVEALARWSDPVHGEVPAPRFIALAEEYGFIESIDQW 669 Query: 611 VIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITE 670 + EACRQ+A WR++ + +P +SVNLS L FRS ++ ++DA+ + L VEITE Sbjct: 670 AVEEACRQIAVWRAEGVAVPHVSVNLSPLSFRSGEIVGIIADALERHRLAPSDLRVEITE 729 Query: 671 SMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTE 730 + M+ + F + + +GV +++DDFGTG+S LS L LP+ E+KID+SF+ + Sbjct: 730 RVTMDQNPHSFATARAIDALGVRIAMDDFGTGYSSLSALSRLPIAELKIDRSFMLSIEQD 789 Query: 731 KRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 K LAL A+ IGQSL + VVAEGVET Q ++LR + C +QGY F+RPL A+ + GW Sbjct: 790 KNALALATAVILIGQSLGMAVVAEGVETAAQADLLRTLGCHAVQGYLFARPLEADAVAGW 849 Query: 791 MSSVLP 796 +++ P Sbjct: 850 LAANAP 855 Score = 58.5 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 48/128 (37%), Gaps = 6/128 (4%) Query: 13 IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEY 72 I E+ G V+ + +++ N A +++ GY E G ++ L+ Sbjct: 126 ILSLVAEKTDRGVVVTDARHRIVYTNRAFQEMLGYVEGEAEGRVLEDLLATGKG---ATD 182 Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV---SAEGKVYYLALVRDASVEM 129 + G R ++ L G+++W ++ V + +A++ D + Sbjct: 183 LAARISSGIQRRMPFPEDVPLRGASGNEVWVSAIVTPVLNQVTGALEHVVAVLADITHAR 242 Query: 130 AQKEQTRQ 137 ++ RQ Sbjct: 243 LMEDLQRQ 250 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 770 bits (1990), Expect = 0.0, Method: Composition-based stats. Identities = 224/805 (27%), Positives = 359/805 (44%), Gaps = 52/805 (6%) Query: 17 ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHN 76 + + L + + + N A + G E ++G P D+ E R Sbjct: 1 MVNHSPTMMSLKDMDGRYLLVNAAYARRVGVSAESLLGR-----RPEDV--FDAEDARQI 53 Query: 77 REGGKARVEGMSRELQLEK--KDGSKIWTRFALSK-VSAEGKVYYLA-----LVRDASVE 128 RE + + +S E +G + + + A+G+ + + + + Sbjct: 54 REQDQQVLNLLSPRQFDEHFVLNGVETYLLASKFPLFDADGRPAGVGSVDTDITQARQEQ 113 Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 A++E + + V+ + ++ E + N E+ GY E GM LL Sbjct: 114 KAKREAEDRYLALVEQSLVGIYIMQDE-KLAYVNPKLAEIMGYQPEEMEGMTMPQLLVPG 172 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 E + L++ + L + G + ++ L + ++ DI Sbjct: 173 EAERLRQQLLRRFRDNISVMHYATRGLRKDGVLVDMEVHSRLF--ELNGRKAVIGVVMDI 230 Query: 249 TEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSS 308 +E +S + + R I +N++ + + AS Sbjct: 231 SERLLADTNLRLAAKVFENSAEGILILDAGARII--AVNDAFTRITGYAEEEALGKASRI 288 Query: 309 HGAEIQNA----------QSWSATI--RQRDGAPAG----ILQIKTSSGAETSAFIERVA 352 AE Q W + R++ G I ++ G S ++ + Sbjct: 289 FSAEQQARAAMQQALADCGHWQGEMLDRRKGGQWYPAELSISALRDEDG-LLSNYVAVFS 347 Query: 353 DISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDK----AVSPVVYL 408 DI+Q ++++ + ++ L DP+T LPNR+ L LD+ + + V Sbjct: 348 DITQ--------RKEAEERLQFLANHDPLTRLPNRSRLTASLDEALTRMDGEDGRLAVMF 399 Query: 409 IGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVS-NI 467 I +D + + DS G+ DQ L E+ R + L R+ G +F L+ D + Sbjct: 400 IDLDRFKLINDSFGHQVGDQLLCEIAIRLSRVVGERGMLARLGGDEFTLLMSGFDSHHQL 459 Query: 468 TQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGN 525 +A ++ + KP+ ++ +T SIGIS G++ LL A AM ++ G N Sbjct: 460 ADMASDILAALGKPLCLEAHEVFITGSIGISVFPHDGRDARTLLKNADVAMYRAKEAGKN 519 Query: 526 GWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPL 585 +QFF MN ERL+L L+ A+ ++ +L YQPQ+ A L G EAL RW P Sbjct: 520 TYQFFDIGMNTQTFERLLLENGLRMALERHEFELHYQPQLSAGERALAGAEALLRWRHPQ 579 Query: 586 HGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQ 645 G VPP+RFI LAEE G I+ IG WV+ EACRQLA W +Q + +P L+VNLS F Sbjct: 580 LGLVPPARFIALAEETGLIKPIGDWVLREACRQLAAWDAQGLRVPRLAVNLSPRQFGQPS 639 Query: 646 LPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSG 705 LP +V+ A+ A G+ +L +EITESM+M+ TE + L+ +GV LS+DDFGTG+S Sbjct: 640 LPAKVAGALQAAGLAAGRLELEITESMIMQSPTEAVSLLSELKSLGVWLSIDDFGTGYSS 699 Query: 706 LSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEML 765 LS L P+ +KID+SFV+ + A+ EAI ++ + L VVAEGVE++EQ L Sbjct: 700 LSHLKRFPLDTLKIDQSFVEGLPDDDDNAAIAEAILAMAKKLKFQVVAEGVESEEQAAFL 759 Query: 766 RKIHCRVIQGYFFSRPLPAEEIPGW 790 C V+QGY F RPLPA E Sbjct: 760 EGKGCHVLQGYHFGRPLPAGEFAAL 784 Score = 164 bits (417), Expect = 9e-39, Method: Composition-based stats. Identities = 59/260 (22%), Positives = 105/260 (40%), Gaps = 10/260 (3%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A A+ + +EQ+++G + I +++++ + NP ++ GY+ EE+ G + P+ L Sbjct: 115 AKREAEDRYLALVEQSLVG-IYIMQDEKLAYVNPKLAEIMGYQPEEMEGMTM----PQLL 169 Query: 66 RPAHPEYIRHN-REGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRD 124 P E +R + + M + +KDG + G+ + +V D Sbjct: 170 VPGEAERLRQQLLRRFRDNISVMHYATRGLRKDGVLVDMEVHSRLFELNGRKAVIGVVMD 229 Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 S + R ++ +++LD I+ N AFT + GY EA G Sbjct: 230 ISERLLADTNLRLAAKVFENSAEGILILDAGARIIAVNDAFTRITGYAEEEALGKASRIF 289 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 R +QQ L Q E L + G+ + SIS + D L N V Sbjct: 290 ----SAEQQARAAMQQALADCGHWQGEMLDRRKGGQWYPAELSISALRDEDGLLSNYVAV 345 Query: 245 FSDITEERQIRQLEGNILAA 264 FSDIT+ ++ + + Sbjct: 346 FSDITQRKEAEERLQFLANH 365 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 769 bits (1988), Expect = 0.0, Method: Composition-based stats. Identities = 216/819 (26%), Positives = 352/819 (42%), Gaps = 57/819 (6%) Query: 8 NAADGIFFPALEQNMMGAV---LINENDEVMFFNPAAEKLWGYKREEVIGNNI--DMLIP 62 AA AL + + L + + + + +L GY + L P Sbjct: 271 RAASERLALALATSPVILYSRRLGPDERPLTWISENIARLLGYSPTLALQPGWWNSRLHP 330 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYY--LA 120 D R A +++R GG M +L G W + ++ + +G + Sbjct: 331 ED-REAALDWLRELDRGGA-----MVHAYRLIDAQGRVRWIQDEVTLLETDGGTTHEATG 384 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS-EASGM 179 D + ++ + +D L + D I I + G Sbjct: 385 AWHDITATKTGEQMRETRLAVLDALIDKHSLTDILGEIATRLERMEPDMRVSIQIGSDGP 444 Query: 180 QPDTLLNIPEFPADNRIRLQ----QLLWKTARDQDEFLLLTRTGEKI-----WIKASISP 230 +PE PAD + Q+L + E T T ++ I Sbjct: 445 HLPAERTVPERPADWVAPFKDGAGQMLGRLFVHYVEPRAPTPTERELIDECACIAGLAVT 504 Query: 231 VYDVLAHLQNLVMTFSDITEERQIRQLEGNILAA--MCSSPPFHEMGEIICRNIESVLNE 288 L+ F E I LEG IL + + E++ RN + Sbjct: 505 RVRADTRLRQAATVFESTREGVIITDLEGRILDVNRAFTEISGYSEPEVLGRNPSLL--- 561 Query: 289 SHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG---ILQIKTSSGAE 343 R+ H + ++ W I R++ G + S Sbjct: 562 --------RSNRQDHAFYQAMWHSLKTTGHWQGEIWNRRKSGELYPQILTINTVADSQGR 613 Query: 344 TSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS 403 S ++ + DISQ ++S +E L+ +DP+T LPNR + + L+ +++A Sbjct: 614 PSHYVGVMTDISQ--------LKQSEARLEHLVHYDPLTNLPNRRLVQSRLEHALERADR 665 Query: 404 ----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLV 458 V + +D + V DSLG+ D L + R E+++ D L R+ G +F VL+ Sbjct: 666 QGGRVAVLFVDLDRFKTVNDSLGHPSGDVLLELLARRLSERVREDDTLARLGGDEFLVLL 725 Query: 459 SLENDVSNITQIADELRNVVSKPIMI-DDKPFPLTLSIGISY--DLGKNRDYLLSTAHNA 515 + +A+ L +++ +P + + + + SIGIS D G L+ A A Sbjct: 726 ENLQRPEDAAAVAESLLSLLQQPFHLPNGQELYVGASIGISLYPDDGHTVTDLIQHADVA 785 Query: 516 MDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGI 575 M ++ G N ++F++P++ + +ERL L A L A+++ + L YQ QI G L G Sbjct: 786 MYQAKEEGRNTYRFYTPSLTQTARERLGLEARLHRALASEEFVLHYQAQIDMRDGRLIGC 845 Query: 576 EALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVN 635 EAL RWH G V P RFIPLAEE G I +G WV+ +AC WR++ + ++VN Sbjct: 846 EALVRWHSATEGLVAPDRFIPLAEETGLIVPLGEWVLRQACADCQSWRARGLTDLTVAVN 905 Query: 636 LSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLS 695 LS RS L +V+ + G+ +L +E+TESM+M+ + +R++ L+ +GV LS Sbjct: 906 LSGRQLRSPDLVERVTRVLRETGLPAERLKLELTESMIMDQREQALERLRALKALGVRLS 965 Query: 696 VDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEG 755 +DDFGTG+S L+ L LP+ E+KID+ FV + + + I ++ ++L L V+AEG Sbjct: 966 IDDFGTGYSSLAYLKRLPIDELKIDRDFVRDIPEDSSDMEIAATIIAMARNLRLNVIAEG 1025 Query: 756 VETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 VET EQ + L + C QGY F RPLPAE M + Sbjct: 1026 VETPEQCDFLIRQGCTAGQGYLFGRPLPAEAFAQVMRAC 1064 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 769 bits (1988), Expect = 0.0, Method: Composition-based stats. Identities = 190/694 (27%), Positives = 320/694 (46%), Gaps = 45/694 (6%) Query: 137 QLIIAVDHLDRPVIVLDPERHIVQCN------------RAFTEMFGYCISEASGMQPDTL 184 V+ + + V+D E ++V CN +A+ ++ GY +E G D Sbjct: 83 LFRKVVETIPTGIWVVDREGNVVDCNFAAHGLLQEFGIQAYNDIQGY--AEIQGWWSD-- 138 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 N D + L +++ + G + + + P+ + + Sbjct: 139 -NGQPVHPDEWGISRSLSRGETCLREKIDIACTDGVRRTVLYTSLPLKSENGAITGAMAL 197 Query: 245 FSDITEERQIRQLEGNILAAMCSSPP----FHEMGEIICRNIESV--LNESHVSLFAL-- 296 DITE+R+ ++ ++ + ++ G + N ++ L S L +L Sbjct: 198 VQDITEKRKTDEVLRRFRFSIEQASEAIFWINDEGRFLFVNDQACHSLGYSASELESLHL 257 Query: 297 ----RNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSG-AETSAFIERV 351 + WA + Q + +++DG + + + V Sbjct: 258 WDIDPDFPAERWAEQWERMKSDPKQVFETRHQRKDGRIFPVEVSASQCLFNNEENHVAFV 317 Query: 352 ADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVY 407 DI+ ++K + +E D +TGL NR L + + + A V+ Sbjct: 318 RDITI--------RKKYEKELEHQSNHDALTGLANRVLLDDRIQQAIVHAERAQRNTAVF 369 Query: 408 LIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSN 466 L+ +D + + DSLG++ D LL V R + P L R+ G +F +V N ++ Sbjct: 370 LLDLDRFKVINDSLGHSQGDAVLLAVAERLSACISPGDTLSRLGGDEFAIVMTHVNHPAD 429 Query: 467 ITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGG 524 +A ++ N +P + ++ +T SIG S G+ + LL A AM +K GG Sbjct: 430 ARIMAQKILNAFEQPFPLGNRELRITTSIGASLYPRDGEQSEDLLRHADAAMYQAKKQGG 489 Query: 525 NGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDP 584 NG+QF S M+ + L L L++A+ L YQP++ +G++ G EAL RW+ P Sbjct: 490 NGFQFCSEEMDTRAHKALELEGDLRQALQLGSFVLHYQPKVKIASGKIDGCEALVRWNHP 549 Query: 585 LHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSN 644 G + P FIPLAEE G I +G WV+ EACRQ W++Q + ++VNLSA F + Sbjct: 550 DKGMISPDDFIPLAEETGLIIALGEWVLREACRQFKAWQAQGLPPIKIAVNLSARQFLQS 609 Query: 645 QLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFS 704 + +H + ID H L +E+TESM+ME I K + L+ +G LS+DDFGTG+S Sbjct: 610 DFVESIQTILHEFDIDPHWLDLELTESMVMEDPDRIAKLLAELKQIGFALSLDDFGTGYS 669 Query: 705 GLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEM 764 L+ L P+ +KID+SF+ ++ ++ ++ I SL + +AEGVET+EQ+ Sbjct: 670 SLNYLRRFPIDCLKIDRSFILDVASDATAASVANSVIGIAHSLGIHAIAEGVETREQYAF 729 Query: 765 LRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLK 798 L C IQGY FS+PLPA ++ +++ P K Sbjct: 730 LAMCECDSIQGYLFSKPLPANDLAALLANPTPFK 763 Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 108/303 (35%), Gaps = 21/303 (6%) Query: 10 ADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKL---WGYKRE-EVIG-NNIDMLIPRD 64 + +F +E G +++ V+ N AA L +G + ++ G I + Sbjct: 80 GEALFRKVVETIPTGIWVVDREGNVVDCNFAAHGLLQEFGIQAYNDIQGYAEIQGWWSDN 139 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRE-LQLEKKDGSKIWTRFALSKVSAEGKV--YYLAL 121 +P HP+ +R E RE + + DG + + + +E +AL Sbjct: 140 GQPVHPD--EWGISRSLSRGETCLREKIDIACTDGVRRTVLYTSLPLKSENGAITGAMAL 197 Query: 122 VRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 V+D + + E R+ +++ + ++ E + N GY SE + Sbjct: 198 VQDITEKRKTDEVLRRFRFSIEQASEAIFWINDEGRFLFVNDQACHSLGYSASELESLHL 257 Query: 182 DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASIS-PVYDVLAHLQN 240 + P+FPA+ + + + E + G ++ S S +++ +N Sbjct: 258 WDI--DPDFPAERWAEQWERMKSDPKQVFETRHQRKDGRIFPVEVSASQCLFNNE---EN 312 Query: 241 LVMTFSDITEERQIR-----QLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFA 295 V DIT ++ Q + L + + + + + E + V L Sbjct: 313 HVAFVRDITIRKKYEKELEHQSNHDALTGLANRVLLDDRIQQAIVHAERAQRNTAVFLLD 372 Query: 296 LRN 298 L Sbjct: 373 LDR 375 >UniRef50_Q47HF3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q47HF3_DECAR Length = 994 Score = 769 bits (1988), Expect = 0.0, Method: Composition-based stats. Identities = 195/706 (27%), Positives = 329/706 (46%), Gaps = 35/706 (4%) Query: 120 ALVRDASVEMAQKEQT-RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 L ++ +A+ Q R L +A++ + DP R+ + + +M GY Sbjct: 155 WLEQEVERRIAENTQLDRHLTLALERSGFGIWEHDPVRNRNRWSEGLRQMLGYEQEPEQL 214 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV-YDVLAH 237 + L++ + PA L + + EF + G W+++ V +D Sbjct: 215 AESMNLIHPEDRPAVEAQVTASLRDRNSILIGEFRIRHHDGGWRWVESRGRIVEFDEAGQ 274 Query: 238 LQNLVMTFSDITEERQIRQLEGN---ILAAMCSSPPFHEMGEIICRNIESVLNESHVSLF 294 ++ T DITE + + + + I R ++ + Sbjct: 275 PTLMIGTMLDITERKLAEAEHRLADLVFTGIGEGICITDAKRNILRINDAFSTITGYQAD 334 Query: 295 ALRNGMPIHWASSSH--------GAEIQNAQSWSATI--RQRDGA----PAGILQIKTSS 340 + P S H I +W I R +DG+ I ++ ++ Sbjct: 335 EIVGQNPRLLKSGVHSPAFYAEIWKTIDQYGNWQGEITNRHKDGSLVTEWLSISSLRDTT 394 Query: 341 GAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDK 400 G S +I +D+S E++ + + I+ L +D +T LPNR+ + L+ + Sbjct: 395 GT-ASHYIGIFSDLS--------ERQAAAERIQYLSSYDTLTELPNRHLFDDRLNQALLT 445 Query: 401 AVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFV 456 A + L+ ++ + + D+LG D+ L+EV R + +++ + R G +F Sbjct: 446 ARRFERGTALILLDLNRFRLINDTLGPPAGDEILVEVTRRLKLQVREGDTVGRRAGNEFG 505 Query: 457 LVS-LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDL--GKNRDYLLSTAH 513 V + + +A + + +S P + + +T SIGIS G+N + +L +A Sbjct: 506 FVMANLSHERDALALAQRMLDAISVPFSVAGQSVAITASIGISVFPKNGENGEAMLRSAD 565 Query: 514 NAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELY 573 A+ +++G N + F+SP M+ RL + +AL++A++ ++ + YQPQ+ ++G + Sbjct: 566 AALLRAKQSGRNTFSFYSPEMDADAARRLSIESALRDALARDEFCVHYQPQVSLDSGHMI 625 Query: 574 GIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALS 633 G+EAL RW+ L G + P FIP+AEE G I IG WV+ AC Q W + ++ Sbjct: 626 GMEALLRWNSALLGPISPVEFIPIAEETGLIMQIGDWVLRTACHQTKAWLDLGLLPLHVA 685 Query: 634 VNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVG 693 VNLS FR LP QV+ A+ G+ L +EITES ++ + L+ +G+ Sbjct: 686 VNLSPRQFRQADLPAQVAHALAESGLPAGALELEITESAFIDDIDDAVAMCSKLKSLGIK 745 Query: 694 LSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVA 753 LS+DDFGTG+S L+ + P +IKID+SFV + A+ A +G+SLNL+V+A Sbjct: 746 LSLDDFGTGYSSLAYVSRFPFDKIKIDQSFVRDIVNNPVNAAIASAAIVMGRSLNLSVLA 805 Query: 754 EGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI 799 EGVET+ Q LR C IQGY FSRPLP EE + S PL I Sbjct: 806 EGVETEAQAAFLRSRRCDAIQGYLFSRPLPPEEFAPLLLSCKPLPI 851 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 95/255 (37%), Gaps = 9/255 (3%) Query: 11 DGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKRE-EVIGNNIDMLIPRDLRPAH 69 D ALE++ G + ++ ++ GY++E E + +++++ P D Sbjct: 171 DRHLTLALERSGFGIWEHDPVRNRNRWSEGLRQMLGYEQEPEQLAESMNLIHPEDRPAVE 230 Query: 70 PEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAE---GKVYYLALVRDAS 126 + R+ + E ++ DG W V + + + D + Sbjct: 231 AQVTASLRDRNSILI----GEFRIRHHDGGWRWVESRGRIVEFDEAGQPTLMIGTMLDIT 286 Query: 127 VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 + + R + + + + D +R+I++ N AF+ + GY E G P L + Sbjct: 287 ERKLAEAEHRLADLVFTGIGEGICITDAKRNILRINDAFSTITGYQADEIVGQNPRLLKS 346 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 PA + + + + Q E + G + SIS + D + + FS Sbjct: 347 GVHSPA-FYAEIWKTIDQYGNWQGEITNRHKDGSLVTEWLSISSLRDTTGTASHYIGIFS 405 Query: 247 DITEERQIRQLEGNI 261 D++E + + + Sbjct: 406 DLSERQAAAERIQYL 420 Score = 75.1 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 90/249 (36%), Gaps = 12/249 (4%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 KL +A++ + F + G + + ++ N A + GY+ +E++G N +L Sbjct: 289 KLAEAEHRLADLVFTGI---GEGICITDAKRNILRINDAFSTITGYQADEIVGQNPRLLK 345 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYL 119 PA I + + E+ KDGS + W + + + +Y+ Sbjct: 346 SGVHSPAFYAEIWKTID----QYGNWQGEITNRHKDGSLVTEWLSISSLRDTTGTASHYI 401 Query: 120 ALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 + D S A E+ + L + L + D + R F + + + Sbjct: 402 GIFSDLSERQAAAERIQYLSSYDTLTELPNRHLFDDRLNQALLTARRFERGTALILLDLN 461 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 + P + + + + L K + + + E ++ A++S D LA Sbjct: 462 RFRLINDTLGPPAGDEILVEVTRRL-KLQVREGDTVGRRAGNEFGFVMANLSHERDALAL 520 Query: 238 LQNLVMTFS 246 Q ++ S Sbjct: 521 AQRMLDAIS 529 >UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Cyanothece RepID=B7JWK6_CYAP8 Length = 1143 Score = 769 bits (1987), Expect = 0.0, Method: Composition-based stats. Identities = 194/831 (23%), Positives = 356/831 (42%), Gaps = 72/831 (8%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 K+ A ++ F + G +++N + F N AA++L+ E++ + + I Sbjct: 341 KIEIALKDSEERFRQIVTTISDGLIVVNLEGNIRFVNLAAQELFVRSETELLEHPFGLPI 400 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLAL 121 V E+ ++ + I ++++ EG+ YL Sbjct: 401 ----------------------VVDKITEICIQPSRNTLIVAEMRSAEITWEGEKGYLIS 438 Query: 122 VRDASVE----MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 +R+ + E + V+ + + + D I N +E+ GY + + Sbjct: 439 LRNITDSYQANQKLAESEEKYRKIVETTNEGIWISDHHNKITFVNHQMSEILGYTVDKMM 498 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 GM T ++ + + Q ++ + L + G ++W S + +++ Sbjct: 499 GMSLLTFIDAAQLSLVEKS--GQKTEQSLPGTHDLKLRRQDGSELWAIVSTNALFNPEGD 556 Query: 238 LQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEII------------------- 278 + +DIT+ ++ Q + + + + ++I Sbjct: 557 YMGTLGLITDITKRKRTEQALYDSEKRLEG--ILNSLQDVIWSADPKTRQSLYLNPAIQL 614 Query: 279 --CRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGI--- 333 R +E + H+ L + + E + + I + DG + Sbjct: 615 VYGRPMEDFFRDPHLWLCMVHPEDQELVSHHLKLLEDKGSTEVHYRIIRPDGETRWLHSR 674 Query: 334 LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNY 393 ++ ++ +DI+ E++++ + ++ D +T LPNR + Sbjct: 675 SRLVYDEQGKSLRIDGINSDIT--------ERKQAEEQLQYNATHDTLTQLPNRLLFMDR 726 Query: 394 LDDLVDKAVS-----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLC 448 L+ +++ V + +D + + DSLG+A D+ L E+ R ++ L+ D L Sbjct: 727 LEHALERRRRYSDPLFAVLFLDLDEFKVINDSLGHALGDELLREIARRLQKSLRADDTLA 786 Query: 449 RIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGK--NR 505 R+ G +F ++ E +DV + +IA+ + +++P ++ + SIGI+ G+ Sbjct: 787 RLGGDEFTILLEEIHDVKDAIKIAERIHKDLTRPFNLEGQEIFTNTSIGIALSNGEYEAA 846 Query: 506 DYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQI 565 +L A AM + G + F M+ RL L L+ AI + + YQP I Sbjct: 847 SEILRDADTAMYRAKAGGKACYAIFDQQMHASAVSRLQLETDLRRAIERQEFLVYYQPII 906 Query: 566 FAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ 625 + L G EAL RW P G VPP+RFIP+AEE G I IG W++ +A +QL W++Q Sbjct: 907 SLQHDTLTGFEALIRWQHPQQGLVPPARFIPIAEETGLIVPIGEWILEQAAQQLKIWQTQ 966 Query: 626 --NIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKR 683 N +SVNLS+ R L + + ID + L VEITES++ME+ Sbjct: 967 YRNYESLKMSVNLSSKQLRDASLLGTIDRILSKTEIDNNALKVEITESILMENVQVAADV 1026 Query: 684 IQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSI 743 + LR+ + + +DDFGTG+S LS L PV +KID+SFV R ++ AI S+ Sbjct: 1027 LIALRERNIEICLDDFGTGYSSLSYLHRFPVNTLKIDRSFVMRMRPNDENSEIVRAIVSL 1086 Query: 744 GQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 L + ++AEG+ET+ Q L+ I C QGYFF++PL E+ + + Sbjct: 1087 AHILGMEIIAEGIETELQLAQLKWIGCEQGQGYFFAKPLATSEVEALLKNP 1137 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 54/287 (18%), Positives = 102/287 (35%), Gaps = 17/287 (5%) Query: 13 IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEY 72 F Q + L+N + + N A L GY +E+I + + + R + ++ Sbjct: 110 HFQNIFNQAKVAIALVNLQGKFVQVNQAFCDLIGYTSQELIKLQLSKITHPEERLSDSQW 169 Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRDASVEMA 130 + K E SRE + KKDGS IW + +S + + K Y++ ++ S Sbjct: 170 LNQLL---KNSCEAFSREKRYVKKDGSIIWGQVTVSVMKDQAKKPQYFIVIINAISDRQE 226 Query: 131 QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEF 190 + + + + + + + N F + GY E ++ P+ Sbjct: 227 TERHRDRFFVM---SLDLLCIAGFDGYFKTLNPVFERILGYSSRELLAQPFIEFIH-PDD 282 Query: 191 PADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITE 250 + + L L E R G W+ + +P + + + DITE Sbjct: 283 RSTSLAELANLRQGKETIHFENRYRCRDGSYRWLSWTSAPYMEE----KLIYAVARDITE 338 Query: 251 ERQIRQLEGNILAAMCSSPPFHEMGEIICRNIE---SVLNESHVSLF 294 E++I + G +I N+E +N + LF Sbjct: 339 EKKIEIALKDSEERFRQIVTTISDG-LIVVNLEGNIRFVNLAAQELF 384 Score = 93.2 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 57/383 (14%), Positives = 124/383 (32%), Gaps = 35/383 (9%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 + + D F +L+ + + NP E++ GY E++ I D Sbjct: 226 ETERHRDRFFVMSLDLLCIAGF----DGYFKTLNPVFERILGYSSRELLAQPFIEFIHPD 281 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRD 124 R + + R+G E + E + +DGS W + + + A+ RD Sbjct: 282 DRSTSLAELANLRQGK----ETIHFENRYRCRDGSYRW--LSWTSAPYMEEKLIYAVARD 335 Query: 125 ASVEM----AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 + E A K+ + V + +IV++ E +I N A E+F +E Sbjct: 336 ITEEKKIEIALKDSEERFRQIVTTISDGLIVVNLEGNIRFVNLAAQELFVRSETELLEHP 395 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 + + + + L E G I S+ + D Q Sbjct: 396 FGLPIVVDKITEICIQPSRNTLIVAEMRSAEITWEGEKGYLI----SLRNITDSYQANQK 451 Query: 241 LVMTFSDITEERQIRQLEGNI---LAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALR 297 L S+ + + I + H+M EI+ ++ ++ S ++ Sbjct: 452 LAE--SEEKYRKIVETTNEGIWISDHHNKITFVNHQMSEILGYTVDKMMGMSLLTFIDAA 509 Query: 298 NGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQH 357 + + + +R++DG+ + + ++ + I+ Sbjct: 510 QLSLVEKSGQKTEQSLPGTH--DLKLRRQDGSELWAIVSTNALFNPEGDYMGTLGLIT-- 565 Query: 358 MAALALEQEKSRQHIEQLIQFDP 380 +++++ Q +D Sbjct: 566 ---DITKRKRTEQ-----ALYDS 580 Score = 85.9 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 89/256 (34%), Gaps = 12/256 (4%) Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 K + + +++ + VQ N+AF ++ GY E +Q + + Sbjct: 102 QELKRVNPHFQNIFNQAKVAIALVNLQGKFVQVNQAFCDLIGYTSQELIKLQLSKITHPE 161 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 E +D++ Q L E + + G IW + ++S + D Q ++ + I Sbjct: 162 ERLSDSQWLNQLLKNSCEAFSREKRYVKKDGSIIWGQVTVSVMKDQAKKPQYFIVIINAI 221 Query: 249 TEERQIRQLEGNILAA---MCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWA 305 ++ ++ + + F + + E +L S L A IH Sbjct: 222 SDRQETERHRDRFFVMSLDLLCIAGFDGYFKTLNPVFERILGYSSRELLAQPFIEFIHPD 281 Query: 306 SSSHG-AEIQNAQSWSATI------RQRDGAPAGILQIKTSSGAETSAFIERVADISQHM 358 S AE+ N + TI R RDG+ + E + DI++ Sbjct: 282 DRSTSLAELANLRQGKETIHFENRYRCRDGSYRWLSWTSAPYMEEKLIY-AVARDITEEK 340 Query: 359 AALALEQEKSRQHIEQ 374 + + + S + Q Sbjct: 341 -KIEIALKDSEERFRQ 355 >UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5Q6_AZOSB Length = 828 Score = 769 bits (1987), Expect = 0.0, Method: Composition-based stats. Identities = 206/818 (25%), Positives = 347/818 (42%), Gaps = 43/818 (5%) Query: 11 DGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP-AH 69 G L+ + + N A GY + ++G ++ L P DL H Sbjct: 3 QGFLQNVLDAIPAPVFFKDAAGRYLGCNTAFLDFLGYTADRILGKSVFELSPPDLAARYH 62 Query: 70 PEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEM 129 + G+ E + + E+++ F ++ G + + D + Sbjct: 63 AQDQALFDNPGEQVYEAQVQNARGERREVVFYKATFHDTEGKVAG---LVGTILDITDRK 119 Query: 130 AQKEQTRQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 + + R+ L + L V + D E + N A +FG + G L Sbjct: 120 QAERRVRESEERLGALIQALPDAVFLKDGEGRWLVTNGAAQALFGLAERDWFGRTDLELG 179 Query: 186 NIPEFPADNRI---RLQQLLWKTARDQDEFLLLTR-TGEKIWIKASISPVYDVLAHLQNL 241 + A+ R +L+W+ + ++ G ++ +A+ P++D + + + Sbjct: 180 SEDPARAEVHAVCARNDELVWQQGGMRQMLEIVEDGQGRRLVFEATRIPLFDSVGQRKGI 239 Query: 242 VMTFSDITEER---QIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRN 298 V+ DITE R + + + + II + + + + Sbjct: 240 VVVGRDITERRAAEERLRQAATVFDNTVEGISITDRDGIIQSVNPAFSRITGYAEAEVIG 299 Query: 299 GMPIHWASSSHGAEIQNA--------QSWSATI--RQRDGAPAG---ILQIKTSSGAETS 345 S HGA+ A W I R++ G + E S Sbjct: 300 CHTRILQSGRHGADYYRAMWRTLARTGQWQGEIWNRRKTGEVYPQWLTIGTVRDDEGEVS 359 Query: 346 AFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS-- 403 ++ +DISQ + ++ +E+L +DP+TGLPNR L + L + +A Sbjct: 360 NYVAVFSDISQI--------KDAQSQLERLAHYDPLTGLPNRALLGDRLAHAISRARRAG 411 Query: 404 --PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE 461 V + +D ++V DSLG+ D+ L + R L+ + + R G +F +V + Sbjct: 412 TSVAVLFLDLDGFKNVNDSLGHPAGDRLLQIIAERLCGALRSEGSVSRFGGDEFAVVLED 471 Query: 462 N-DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDY 518 ++++A+ L +++P+ +D ++ SIGI+ G + L+ A AM Sbjct: 472 VVRGEAVSEVAEHLIAEIARPLDLDGHGAHVSASIGIALFPRDGDDATTLIKAADTAMYR 531 Query: 519 IRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEAL 578 + G N + F M + RL L L++A+ + +L YQPQI TG L G EAL Sbjct: 532 SKALGRNTFSFHHEDMAQAAHRRLSLEHGLRQALEQGRFELWYQPQIDLRTGVLAGAEAL 591 Query: 579 ARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSA 638 RW DP G V P+ F+PLAEE G I IG WV+ EACR W + ++VN++A Sbjct: 592 LRWRDPERGLVSPAEFVPLAEETGLILPIGLWVLEEACRAGRAWLDVGLAPGRIAVNVAA 651 Query: 639 LHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDD 698 V+ + A G+ L VEITE ++ + LR +GVG+++DD Sbjct: 652 PQIERGGFDQAVARVLSASGLPPAALEVEITEGSLLRSAENARLAVAALRALGVGVAIDD 711 Query: 699 FGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVET 758 FGTG+S L+ L +L V +KID+ FV + LA+ AI ++ +SL VVAEGVE Sbjct: 712 FGTGYSSLAYLKNLAVQTLKIDREFVRDLPHDAGNLAITRAIIAMCRSLGFGVVAEGVEE 771 Query: 759 KEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLP 796 Q L C + QGY F++P+P E W+ + P Sbjct: 772 PAQAAFLVSEGCTLAQGYLFAKPMPGAEFAEWLRTYRP 809 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 768 bits (1985), Expect = 0.0, Method: Composition-based stats. Identities = 205/820 (25%), Positives = 344/820 (41%), Gaps = 45/820 (5%) Query: 10 ADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNID-MLIPRDLRPA 68 D F + A+L + + V+ N A E L+G + EV+G ++ +L P RP Sbjct: 13 PDDAFRRVFLCSPNAALLRDADGTVLAANAAFEALFGVEIPEVVGLDLREVLRPVSSRPG 72 Query: 69 HPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEG-KVYYLALVRDASV 127 + + E R RE + +G R + V G + L RD + Sbjct: 73 RADRPDEDGEVWSLRGAAFLRETRWAAGEGDAADVRVSQFPVGMLGDRPITCMLFRDIAS 132 Query: 128 EMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDT 183 + +++ R + ++ + P ++ NR ++G+ Sbjct: 133 RLLAEDRLRDAERKYRSIFENAVEGIFQTTPAGRYLEVNRTLARIYGFESVAEMREFFRD 192 Query: 184 LLNIPEFPADNRIRLQQLLWKTARDQD-EFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 + N R + L + +D E + + G IWI + V Sbjct: 193 IRNQLYVDPRRRDDFVRELAAHDQVRDFESEIRKKDGTVIWISENARVVRGADGLPAYYE 252 Query: 243 MTFSDITEERQIR----QLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESHVS 292 T DIT+ ++ +SP + ++ + E++ Sbjct: 253 GTVVDITDRKRAEAALATQRAYFTQLFANSPQAIALIDMHRNIVDANKAFEALFGYRTAD 312 Query: 293 LFAL---RNGMPIHWASSSHGAE---IQNAQSWSATIRQR-DGA--PAGILQIKTSSGAE 343 + +P H S + T+R+ DG P ++ E Sbjct: 313 IQGFGMRAFIVPEHLLSECENMRCAVLAGKPVVRETVRRHCDGRLIPVSMIGFPIEIAGE 372 Query: 344 TSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS 403 T + DIS E++ + I D +TGLPNR+ + L+ + +A Sbjct: 373 TQGIVYIYQDIS--------ERKAFEEQITHQAFHDALTGLPNRSLFADRLERALTRARR 424 Query: 404 -----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV 458 V +I ++ + V D+LG+ DQ L+EV R ++ + R+ G +F ++ Sbjct: 425 RGDSQYAVLMIDLNKFKGVNDTLGHQAGDQLLVEVARRLSGCVRSMDTVARLGGDEFAVI 484 Query: 459 SLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNA 515 E + + + + + KP ++ K SIGI D LL A A Sbjct: 485 LEEFKTKKEVMTVVERIGVGLGKPFVLCGKTVTPEASIGIVLHTRDYAAADDLLRDADIA 544 Query: 516 MDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGI 575 M ++ G F M++ + E + L L++A+ +L L YQP + + + G Sbjct: 545 MYRAKEQGRAS-MIFDRKMHQEILEAISLETDLRQALEAGELLLHYQPIVDVKDSRIVGF 603 Query: 576 EALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ--NIHIPALS 633 EAL RW P G VPP +FIPLAEE G I +GR+VI EACRQL W+ + ++S Sbjct: 604 EALVRWDHPDRGLVPPGQFIPLAEETGLILPLGRFVIDEACRQLRAWQLEMPEAADLSVS 663 Query: 634 VNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVG 693 VN+S F + L V+ + A G+ L +EITES++M + + L+ +GV Sbjct: 664 VNVSCRQFVKDGLVEHVAQVLAATGLPPACLKLEITESVLMHDAEHTARELNRLKALGVK 723 Query: 694 LSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVA 753 +++DDFGTG+S LS L LP+ +KID+SF+ + ++++I S+ +SL LTV+A Sbjct: 724 IAIDDFGTGYSSLSYLRQLPIDHLKIDRSFISGQGCDGESQEIVKSIISLARSLGLTVIA 783 Query: 754 EGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 EGVE +Q + LR C QG+ FSRP+ A + Sbjct: 784 EGVECPDQLDRLRLADCDKAQGFMFSRPVEATAAGRLIRQ 823 Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 91/263 (34%), Gaps = 12/263 (4%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKR-EEVIGNNIDMLIPR 63 D A+ + E + G + N +++G++ E+ D+ Sbjct: 138 DRLRDAERKYRSIFENAVEGIFQTTPAGRYLEVNRTLARIYGFESVAEMREFFRDIRNQL 197 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWT--RFALSKVSAEGKVYYLAL 121 + P + + E ++ KKDG+ IW + + + YY Sbjct: 198 YVDPRRRDDFVRELAAHDQVRD---FESEIRKKDGTVIWISENARVVRGADGLPAYYEGT 254 Query: 122 VRDASVEMAQK----EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 V D + + Q + + + ++D R+IV N+AF +FGY ++ Sbjct: 255 VVDITDRKRAEAALATQRAYFTQLFANSPQAIALIDMHRNIVDANKAFEALFGYRTADIQ 314 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 G + +PE ++ + E + G I + P+ ++ Sbjct: 315 GFGMRAFI-VPEHLLSECENMRCAVLAGKPVVRETVRRHCDGRLIPVSMIGFPI-EIAGE 372 Query: 238 LQNLVMTFSDITEERQIRQLEGN 260 Q +V + DI+E + + + Sbjct: 373 TQGIVYIYQDISERKAFEEQITH 395 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 768 bits (1985), Expect = 0.0, Method: Composition-based stats. Identities = 197/733 (26%), Positives = 341/733 (46%), Gaps = 55/733 (7%) Query: 102 WTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDPERH 157 WTR L ++ E + LAL D + ++ R+ +++ + Sbjct: 219 WTRSELKRLVDELRAKTLALEADIARRREVEDALRRSENKYRELFWSNLDGIVISSLDGQ 278 Query: 158 IVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTR 217 ++ N AF + Y + + +L+ + ++L D+ E L R Sbjct: 279 VIDANPAFLNLMCYSLDQLKQQNFWSLVAEESEALERFNLDNKVLRFGYCDEFEATYLNR 338 Query: 218 TGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQL---EGNILAAMCSSPPFHEM 274 ++ + + D + + DI+E+R + + + Sbjct: 339 FDNQVPVSVKTVAMRDAFGRINAVWRMVRDISEKRAAEERVQLAAKVFENTVEGIMITDA 398 Query: 275 GEII---CRNIESVLNESHVSLFALR-----NGMPIHWASSSHGAEIQNAQSWSATI--R 324 I R + + + + +G I SW + R Sbjct: 399 DRRIRSVNRAFTEITGYTQHEVLGQKTSILSSGRHDEPFYEQMWQSIAEHGSWQGELWNR 458 Query: 325 QRDGA----PAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDP 380 +++G I ++ S G E + ++ +D++ E++ + + I+ L FD Sbjct: 459 RKNGEVYPEWLAINAVRNSLG-EITHYVAIFSDLT--------ERKAADERIQFLAHFDV 509 Query: 381 MTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVD------------HIQDVIDSLGYAWADQ 428 +T LPNR ++ + ++ + AV D + V +SLG++ D Sbjct: 510 LTSLPNRIHMQDRVELAIHNAVR--------DNQRLALLLLDLDRFKTVNESLGHSAGDT 561 Query: 429 ALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL-ENDVSNITQIADELRNVVSKPIMIDDK 487 L +R + + P + L R G +F+++ +D A+ +R+V + PI + + Sbjct: 562 LLQVAADRIKSVMAPGEMLARQGGDEFIILLPVISDPGEAALAAERVRDVFANPIELHNH 621 Query: 488 PFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLG 545 +T SIGIS D G++ + L+ A AM + + +G N ++F++ +N +E L + Sbjct: 622 VLTITPSIGISVYPDDGRDYETLVRNADAAMYHAKSSGRNSYKFYTADLNARAREILAIE 681 Query: 546 AALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIE 605 + L+ A+ ++ L YQPQ+ E+G + G EAL RW+ P G + P RFI +AEE G I Sbjct: 682 SQLRFALERDEFVLHYQPQVEMESGRIVGAEALIRWNHPSLGLLGPVRFIQVAEERGFIV 741 Query: 606 NIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLT 665 IG WVIAEA RQL EWR + L++NLSAL FR L QV A+ + G+ GH L Sbjct: 742 QIGNWVIAEATRQLVEWRRAGLPELTLAINLSALQFRQPDLALQVKQALESSGLPGHALD 801 Query: 666 VEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVD 725 +E+TES++ME + I +++MG+ LS+DDFGTG+S LS L ++KID+SFV Sbjct: 802 IEVTESIIMEDAQATIQTIDNMKNMGLRLSIDDFGTGYSSLSYLKRFKADKLKIDRSFVR 861 Query: 726 RCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAE 785 + A+ AI ++ ++LN+ VVAEGVET EQ++ L + C +QGY ++PLPA+ Sbjct: 862 DIPQDADDSAIARAIINMAKNLNMQVVAEGVETMEQWQFLEQEGCDFVQGYLIAKPLPAD 921 Query: 786 EIPGWMS--SVLP 796 + + S+LP Sbjct: 922 DFAELLHKDSLLP 934 Score = 144 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 109/264 (41%), Gaps = 10/264 (3%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 ++ DA ++ + N+ G V+ + + +V+ NPA L Y +++ N L+ Sbjct: 247 EVEDALRRSENKYRELFWSNLDGIVISSLDGQVIDANPAFLNLMCYSLDQLKQQNFWSLV 306 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDG--SKIWTRF-ALSKVSAEGKVYY 118 + E + K G E + + +++ ++ A G++ Sbjct: 307 AEE-----SEALERFNLDNKVLRFGYCDEFEATYLNRFDNQVPVSVKTVAMRDAFGRINA 361 Query: 119 LA-LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 + +VRD S + A +E+ + ++ +++ D +R I NRAFTE+ GY E Sbjct: 362 VWRMVRDISEKRAAEERVQLAAKVFENTVEGIMITDADRRIRSVNRAFTEITGYTQHEVL 421 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 G + +L+ ++ Q + + Q E + GE +I+ V + L Sbjct: 422 GQKTS-ILSSGRHDEPFYEQMWQSIAEHGSWQGELWNRRKNGEVYPEWLAINAVRNSLGE 480 Query: 238 LQNLVMTFSDITEERQIRQLEGNI 261 + + V FSD+TE + + + Sbjct: 481 ITHYVAIFSDLTERKAADERIQFL 504 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 89/245 (36%), Gaps = 20/245 (8%) Query: 18 LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNR 77 E + G ++ + + + N A ++ GY + EV+G +L H E Sbjct: 386 FENTVEGIMITDADRRIRSVNRAFTEITGYTQHEVLGQKTSILSSGR----HDEPFYEQM 441 Query: 78 EGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYLALVRDASVEMAQKEQT 135 A EL +K+G W + S +Y+A+ D + A E+ Sbjct: 442 WQSIAEHGSWQGELWNRRKNGEVYPEWLAINAVRNSLGEITHYVAIFSDLTERKAADERI 501 Query: 136 RQL--IIAVDHLDRPVIVLDPE----RHIVQCNRAFTEMFG-----YCISEASGMQP-DT 183 + L + L + + D + V+ N+ + ++E+ G DT Sbjct: 502 QFLAHFDVLTSLPNRIHMQDRVELAIHNAVRDNQRLALLLLDLDRFKTVNESLGHSAGDT 561 Query: 184 LLNIPEFPADNRIRLQQLLWKTARDQDEFLL--LTRTGEKIWIKASISPVYDVLAHLQNL 241 LL + + + ++L + D+ LL ++ GE + V+ L N Sbjct: 562 LLQVAADRIKSVMAPGEMLARQGGDEFIILLPVISDPGEAALAAERVRDVFANPIELHNH 621 Query: 242 VMTFS 246 V+T + Sbjct: 622 VLTIT 626 >UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria RepID=Q88QU8_PSEPK Length = 1247 Score = 768 bits (1983), Expect = 0.0, Method: Composition-based stats. Identities = 199/823 (24%), Positives = 349/823 (42%), Gaps = 50/823 (6%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINE-NDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 + DA ++ F +Q ++ + ++ N A E+ G ++VIG L Sbjct: 427 RTEDALRLSEQKFASVFQQCPDILLIARHSDGCLLEVNEAFEEQIGLPPDQVIGRTATDL 486 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA 120 + + P + +GG + E+ + +G + +G + Sbjct: 487 DLWGVEGSGPLLLERLHQGGIRNL-----EMSFRRSNGQLFTGLTSAETFELDGTPALVV 541 Query: 121 LVRDASVEMAQKEQTR----QLIIAVDHLDRPVIVL-DPERHIVQCNRAFTEMFGYCISE 175 VRD S ++Q + + A +++ + +++ N F + GY ++ Sbjct: 542 AVRDISQLKETQQQLQTSEEKFAKAFHASPDGLLLSRQSDGLLLEVNEGFCRLTGYDLNP 601 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTR-TGEKIWIKASISPVYDV 234 L + R RL L + +D + R G+ + S P+ Sbjct: 602 TIDQTSLDLGIW--VDLNERKRLVDQLNRDGFVRDFTCHIRRSDGQIRLCELSARPL--P 657 Query: 235 LAHLQNLVMTFSDITEERQIRQLE---GNILAAMCSSPPFHEMGEIICRNIESVLNESHV 291 + + ++ DITE +++ + ++ + I + + Sbjct: 658 ITGVDCMLTIARDITERHLMQEKLQLAATVFENTAEGVLITDIDQRISAVNRAFSEITGY 717 Query: 292 SLFALRNGMPIHWASSSH--------GAEIQNAQSWSATI--RQRDG----APAGILQIK 337 S P AS H ++ W I ++++G + I ++ Sbjct: 718 SEIEALGQTPRLLASGQHDSAFYLAMWHQLTAEGHWQGEIYNKRKNGELYPSWLTISAVR 777 Query: 338 TSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDL 397 S E + F+ ADIS + ++ ++ DP+TGLPNR N L + Sbjct: 778 NSD-REITHFVAVFADISSI--------KHAQAKLDYQAHHDPLTGLPNRTLFENRLQGV 828 Query: 398 VDKAV----SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGT 453 + A V + +D + + DSLG+ D L + R +E+++ + R+ G Sbjct: 829 LTCAQVSNRQGAVLFLDLDRFKHINDSLGHPVGDLLLKGIAQRLKEQVRDVDTVARLGGD 888 Query: 454 QFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLS 510 +F+++ + S+ + IA++L + P + F + SIGIS G + L+ Sbjct: 889 EFIILLPGLHKPSDASTIANKLLACFNAPFQAGEHEFFTSASIGISLYPQDGTDVSTLIR 948 Query: 511 TAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETG 570 A AM + G N + ++ + ER+ L L+ A+ N++ L +QP++ +T Sbjct: 949 NADAAMYRSKAKGRNRVEAYTRDLTAQASERIALEHELRRAVERNEMSLCFQPKLSLKTQ 1008 Query: 571 ELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIP 630 L G EAL RW P G VPP FI LAEE G I +G WV+ +ACRQ+ W+ Sbjct: 1009 SLVGAEALIRWSHPTFGEVPPEHFIHLAEENGTILQLGDWVLEQACRQMQAWKQHYQPFG 1068 Query: 631 ALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDM 690 LS+NL+ R L ++ + + L +EITE+ +M E + L+ + Sbjct: 1069 PLSINLAGAQLRHPHLARRIEQLLKHHQLKAGDLQLEITENFIMSQAEEALAVLYQLKKL 1128 Query: 691 GVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLT 750 GV L++DDFGTG+S LS L LP+ +KIDKSF+ + A+ AI ++G+S+ LT Sbjct: 1129 GVQLAIDDFGTGYSSLSYLKRLPLDILKIDKSFIRGLPDDPHDAAIARAIIALGRSMQLT 1188 Query: 751 VVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI-PGWMS 792 ++AEGVE + Q L C IQGY S PLP EE ++ Sbjct: 1189 IIAEGVENQAQQRFLAAEGCEQIQGYIVSLPLPPEEFAAAFLR 1231 Score = 98.6 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 63/428 (14%), Positives = 129/428 (30%), Gaps = 42/428 (9%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINEND-EVMFFNPAAEKLWGYKREEVI--GNNI 57 + L +++ + +E A + ND + +P AE L GY + + G Sbjct: 300 IALEQELRSSEYHYRGLVESLSAIAWEADANDFTYSYVSPHAEDLLGYPLSDWLRPGFWR 359 Query: 58 DMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVY 117 +L P D + + + A S + ++ + DG +W R +S + + Sbjct: 360 SILHPED-----ALWAQAYCDSETAAGRDHSLDYRVIRADGQPLWVRNIVSMIEHGHQPV 414 Query: 118 YLALVRDASVEMAQKEQTRQ----LIIAVDHLDRPVIVL-DPERHIVQCNRAFTEMFGYC 172 L+ D S ++ R +++ + +++ N AF E G Sbjct: 415 MRGLMIDISETKRTEDALRLSEQKFASVFQQCPDILLIARHSDGCLLEVNEAFEEQIGLP 474 Query: 173 ISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVY 232 + G L + L + L + E G+ S + Sbjct: 475 PDQVIGRTATDLDLWGVEGSGPL--LLERLHQGGIRNLEMSFRRSNGQLFTGLTSAET-F 531 Query: 233 DVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVL---NES 289 ++ +V DI++ ++ +Q + G ++ R + +L NE Sbjct: 532 ELDGTPALVVAV-RDISQLKETQQQLQTSEEKFAKAFHASPDGLLLSRQSDGLLLEVNEG 590 Query: 290 HVSLFALRNGMPIHWASSSHGAEIQ-NAQSWSATIRQRDGAPAGILQIKTSSGAETS--A 346 L I S G + N + RDG S + Sbjct: 591 FCRLTGYDLNPTIDQTSLDLGIWVDLNERKRLVDQLNRDGFVRDFTCHIRRSDGQIRLCE 650 Query: 347 FIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD--KAVSP 404 R I+ L + ++ + R+ + L + + Sbjct: 651 LSARPLPITGVDCMLTIARDITE-----------------RHLMQEKLQLAATVFENTAE 693 Query: 405 VVYLIGVD 412 V + +D Sbjct: 694 GVLITDID 701 >UniRef50_C5SCB7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SCB7_CHRVI Length = 811 Score = 767 bits (1982), Expect = 0.0, Method: Composition-based stats. Identities = 213/810 (26%), Positives = 368/810 (45%), Gaps = 51/810 (6%) Query: 12 GIFFPALEQNMMGAVLINEND-EVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHP 70 + +++ + L++ +D ++ N AAE+L G R ++G ++ L P Sbjct: 6 DLAQALIDELIDAVWLVDGSDQRLLAVNRAAEELLGQGRASLVGRSMSEL------ACTP 59 Query: 71 EYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS-AEGKVYYLALVRDASVEM 129 E + + R + + E L ++DG+ + + +VS +G+ YLA + S Sbjct: 60 EDLFFWEDVAAGRGDTLLSETLLRRQDGTLVTVLRRVGRVSCPDGRCLYLACFSNQSERR 119 Query: 130 AQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ----P 181 A + + +L ++ ++V D + I N+ F E++ + + Sbjct: 120 AVESELEKLVAELRATLESSADGILVTDLDGAIRSFNQRFAELWRLPAALLTERNDAGIH 179 Query: 182 DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNL 241 D ++ RLQ + + + L L + + ++ Sbjct: 180 DWMVREVLDAEGYAARLQAIAQNPLLEASDLLTLRQG----RVLERVTLPQYARGRPIGR 235 Query: 242 VMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE----IICRNI--ESVLNESHVSLFA 295 V F DIT+ Q +S + + I+ N E + + L Sbjct: 236 VYAFRDITQRLHDEQGLKLAARVFEASLDAIFVTDPEFRIVAVNPAGERMTGLAGAELVG 295 Query: 296 LR-NGMPIHWASSSHGAEIQ----NAQSWSATI--RQRDGAPAGILQI---KTSSGAETS 345 R + WA+ + +I+ + W I DG+ L + Sbjct: 296 QRLDRSLRLWANETLDPDIRAALDRSGHWQGEIEQHHADGSTFPCLVSLMRVLDTEGLPF 355 Query: 346 AFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS-- 403 ++ V D+S E ++RQ IEQL D +TGLPNR L L+ ++ A Sbjct: 356 HYVGFVKDLS--------ETVEARQRIEQLAFNDALTGLPNRLRLTERLEFSIELARREN 407 Query: 404 --PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE 461 V I +D + + DSLG+ + D+ L+EV R R+ L+ + R+ G +FVL+ Sbjct: 408 TRFAVLFIDIDRFKHINDSLGHVFGDRVLIEVAQRIRQCLRHVDTIARLGGDEFVLLLHR 467 Query: 462 NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYI 519 + +A L +++P +D F L+ SIGI+ + G+ D L+ A +AM ++ Sbjct: 468 VESHGAELVARRLLESMAQPFELDGLKFSLSCSIGIALYPEDGETLDDLIKNADSAMYHV 527 Query: 520 RKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALA 579 +++G F+ MN + ER+ + A++EA+ L YQPQI +G + G EAL Sbjct: 528 KEHGRGDCCFYQRQMNVGLLERVRIDHAMREALQQGHFWLAYQPQIDLVSGLVIGAEALV 587 Query: 580 RWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSAL 639 RW+DP G + P RFIP+AEE G I +G WV+ EA RQ A W++Q I +LSVN+SA Sbjct: 588 RWNDPDLGELAPGRFIPIAEETGFIVALGGWVLREAIRQGAHWQAQGIR-LSLSVNVSAT 646 Query: 640 HFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDF 699 F + ++ + G+ +L +E+TES+++++ E +R++ L +GV L++DDF Sbjct: 647 QFHQANFIDLLAQWLDETGLPPGRLELELTESILIQNVEETLRRLENLVALGVRLAIDDF 706 Query: 700 GTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETK 759 GTG+S L+ L P+ ++KID+SFV ++ A+ A+ + L L V+AEGVET Sbjct: 707 GTGYSSLAYLKRFPIHKLKIDRSFVCDIPHDESDTAIATAVIGLASVLKLRVIAEGVETD 766 Query: 760 EQFEMLRKIHCRVIQGYFFSRPLPAEEIPG 789 Q + L C QGY + L Sbjct: 767 IQRQFLLDAGCHEFQGYLCAPALEPAAFLA 796 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 766 bits (1980), Expect = 0.0, Method: Composition-based stats. Identities = 209/871 (23%), Positives = 354/871 (40%), Gaps = 100/871 (11%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 AD+++ L+ I + ++ + L IG I ++P D Sbjct: 291 ADSSSQ--LRATLDAIPDLLFEIGLDGHFYSYHSSRNDLLTAPATSFIGKKIGDVLPPDA 348 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA--EGKVYYLALVR 123 ++ G++ + + L G W ++SK ++ LVR Sbjct: 349 ADICMSALQEANMTGRSNGKTYALSL----PQGES-WFELSISKKQDAKNQAPRFIVLVR 403 Query: 124 DASVEMAQKE---QTRQLIIAVDHLDRPVIVLDPERHIV------QCNRAFTEM------ 168 D + + + +L A+ ++ ++ + + N +M Sbjct: 404 DVTQRKVNETHILRLTKLYAALSQCNQAIVRCSNKTELFPIICRDAVNFGGMKMAWIGIL 463 Query: 169 ------------FGYCISEASGMQPDTLLNIP--EFPADNRIRLQQLLW--KTARDQDEF 212 +G + + P P +R + W A D Sbjct: 464 DQVTGLVEPVASYGAGTEYLDNLHVSIDGHEPGGSGPTGIALREDRPFWCQDFANDPVTA 523 Query: 213 LLLTRTGEKIWIKASISPV-------------------YDVLAHLQNLVMTFSDI----- 248 + R E W ++ P+ +D A L+ DI Sbjct: 524 VWHERAAEYGWGASASIPLHCHGIVVGTLTLYAEEKNAFDEPAR-NLLLEMAMDISFALE 582 Query: 249 -----TEERQIRQLEGNILAAMCSSP------PFHEMGEIICRNIESVLNESHVSLFA-- 295 TE +++ + + A+ SP E N V S + Sbjct: 583 RFDAETERKKMSETLLKLSLAVEQSPNSIVITDLDANIEYANSNFTKVTGYSLDEVLGKN 642 Query: 296 ---LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQIKT---SSGAETSAF 347 +++G A + + W + R++DG + + + Sbjct: 643 PRFMQSGKTPKATYEDMWAHLTRGEPWKGELFNRRKDGTEYIESVLISPVSQVDGRVMNY 702 Query: 348 IERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPV-- 405 + DI+ E+ + + IE+L FD +TGLPNR L+ + A Sbjct: 703 LAIKEDIT--------EKRLTEERIEKLEHFDHLTGLPNRTQLNERFKYALSLAQRSGEQ 754 Query: 406 --VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEND 463 V + +DH +D+ D+LG++ DQ L++V R +E L+ + + R G +F+L+ D Sbjct: 755 MTVMFLDLDHFKDINDTLGHSIGDQLLMDVAKRLKETLRDEDTVSRQGGDEFILILPGTD 814 Query: 464 VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRK 521 + +A +L VS+ + T SIGI+ G+N + L A AM ++ Sbjct: 815 ENGAAHVAAKLMEAVSQAFQFEQHELVATCSIGIAIYPHDGENFETLSKNADTAMYRVKH 874 Query: 522 NGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARW 581 +G NG+ FF+ M L LG AL+ A++ QL L YQPQI + G + G EAL RW Sbjct: 875 DGRNGFCFFTSEMQAHSARTLQLGNALRHALTRGQLHLHYQPQISTQDGHVVGAEALLRW 934 Query: 582 HDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHF 641 P G + P+ FIP+AE+ G+I IG WV+ A +QL +W + ++VNLSA F Sbjct: 935 QHPELGSISPAEFIPIAEDNGQIIPIGEWVLRTAIKQLKDWMDSGLPPMIMAVNLSAAQF 994 Query: 642 RSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGT 701 R + L V+ + + L +E+TE++ M+ + L G+ +S+DDFGT Sbjct: 995 RQSNLMELVTSILDESKVPHRYLELELTEAVAMDDPQLAIGVMDKLHTGGIKMSIDDFGT 1054 Query: 702 GFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQ 761 G+S LS L V ++KID+SFV + A++ AI ++ SL + +AEGVET Q Sbjct: 1055 GYSSLSYLKRFKVYKLKIDQSFVHDITDDPDDKAIVAAIINMASSLGMQTIAEGVETAGQ 1114 Query: 762 FEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 LR C +QGY+FS+PLPAE+ ++ Sbjct: 1115 LSFLRLQGCNEVQGYYFSKPLPAEQFVSYLQ 1145 Score = 43.1 bits (101), Expect = 0.047, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 47/152 (30%), Gaps = 5/152 (3%) Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 + + QL +D + + + + H + + ++ + G + +L Sbjct: 288 QQLADSSSQLRATLDAIPDLLFEIGLDGHFYSYHSSRNDLLTAPATSFIGKKIGDVLPPD 347 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 Q T R + L+ + W + SIS D ++ D+ Sbjct: 348 AADICMSA--LQEANMTGRSNGKTYALSLPQGESWFELSISKKQDAKNQAPRFIVLVRDV 405 Query: 249 TEERQIRQLEGNILAAMCSSPPFHEMGEIICR 280 T+ + +IL + + I R Sbjct: 406 TQRKVNET---HILRLTKLYAALSQCNQAIVR 434 >UniRef50_C4UW07 Phosphodiesterase n=1 Tax=Yersinia rohdei ATCC 43380 RepID=C4UW07_YERRO Length = 875 Score = 766 bits (1978), Expect = 0.0, Method: Composition-based stats. Identities = 235/845 (27%), Positives = 395/845 (46%), Gaps = 71/845 (8%) Query: 12 GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHP- 70 AL+ + + + + + +++ N +GY+R+EVIG + M P D + Sbjct: 33 NALLRALDSS-LAIIEFDLSSQIIAVNQNYLDYFGYQRDEVIGQHHLMFCPHDYATSDEY 91 Query: 71 EYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVY--YLALVRDASVE 128 I+ G++ R KDGS +W V + + +D + Sbjct: 92 RTIKQCLRAGESLEGTFER----LHKDGSTVWLAAIYQPVPGPDGTLTRVVKIAKDITFL 147 Query: 129 MAQKEQTRQLIIAV----DHLDRPVIVL---DPERHIVQCNRAFTEMFGYCISEASGMQP 181 + Q++ T++ + + D D + + + V N+ FT++FGY +A G Sbjct: 148 IEQQKATQEWVQLLTQLTDRSDSAMFISANSKQGQQAVYINQGFTKLFGYTPEQALGQNM 207 Query: 182 DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNL 241 LL E P + L + + L ++ + W A I+ + + Sbjct: 208 VDLLQS-EHPEQLALMDSTLPDTHQQLLPKELFYSKDRQPHWCSAVINSLANGQGEQSYS 266 Query: 242 VMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRN--- 298 + +DIT + L+ +L A+ P E+ ++C +E + E S+ Sbjct: 267 IGVLTDITMTKMYEVLQYKVLEALVRERPLAEVMSLLCNEVERIAPEVTASILFADGPDT 326 Query: 299 ------------------GMPIHWASSSHGAEIQNAQ----------------------- 317 +PI ++ S G + Sbjct: 327 LSHLAAPNLPSIYTDSLINVPIGPSAGSCGTAAFRKEPVEVQDIATDPLWAGYRHLVLPH 386 Query: 318 ----SWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIE 373 WS I G S F ++ + ++ +LA+E+E SR+ I+ Sbjct: 387 GLLACWSTPIFSSQEKVIGTFAFYYKQVRSPSEFHRQLVKLIANLCSLAMERELSRKQIQ 446 Query: 374 QLIQFDPMTGLPNRNNLHNYLDDLVDKAV----SPVVYLIGVDHIQDVIDSLGYAWADQA 429 QL +DP+TGLPNR+ Y + A S V +I +D + V DSLG+A D+ Sbjct: 447 QLAFYDPLTGLPNRSQFLVYAQQAITLATESGHSLAVLVINLDRFKQVNDSLGHAAGDEL 506 Query: 430 LLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPF 489 L + R R +L + + R+ G +F++++ + T ++L +++S+P +I Sbjct: 507 LAAIAQRLRHELSKNDLIGRLSGDEFIILAP-CTMQQATVKVEKLLSLLSQPCIIASVNI 565 Query: 490 PLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAA 547 + SIGIS + G D L++ A AM +K G + FFS MN + ++R + A Sbjct: 566 IPSASIGISLYPENGVGMDMLMNHADIAMHKAKKLGSGHFNFFSVEMNNINQQRQDMEDA 625 Query: 548 LKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENI 607 L+ A L+L YQPQ+ + G LYG+EAL+RW P+ G +PP+RFIP+AEE G I + Sbjct: 626 LRHAFHIGSLQLFYQPQVMLKDGHLYGVEALSRWIHPVLGDIPPNRFIPIAEECGLINEL 685 Query: 608 GRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVE 667 W + AC+QLA+WR + + IP++SVNLS +F + LP+ +S + + + LT+E Sbjct: 686 ALWALNTACQQLADWRLRGVDIPSVSVNLSPSNFHNPGLPDTISSILQHYNLPPQDLTLE 745 Query: 668 ITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRC 727 ITE +++E++ IF IQ + +GV LS+DDFGTG+S LS L L + EIK+DKSFV Sbjct: 746 ITEDILIENNPAIFATIQKIHRLGVRLSMDDFGTGYSSLSYLRRLDLDEIKLDKSFVHDL 805 Query: 728 LTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 ++ L EA+ IG+SL L+V+ EGVE + Q +L + ++ QG+ FS LPA ++ Sbjct: 806 EYDETSRTLSEAVIRIGESLQLSVIVEGVENEAQRTLLSRQGYQIGQGFLFSEALPAIKL 865 Query: 788 PGWMS 792 W+ Sbjct: 866 EKWIQ 870 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 764 bits (1975), Expect = 0.0, Method: Composition-based stats. Identities = 181/689 (26%), Positives = 308/689 (44%), Gaps = 36/689 (5%) Query: 126 SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 E + + +L +A+ + + + + V + + + Sbjct: 827 EFETSIRASEERLKLALWASGDGMWDWNIKENKVYRTNMDASVSHWSSHNLL----HENM 882 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV-YDVLAHLQNLVMT 244 + + + L +T + E+ + G+ IWI V D + T Sbjct: 883 HPEDREKFKYELAEHLQGRTPFFEIEYRIEGAFGKWIWILDRGKVVETDAHMQPMRMTGT 942 Query: 245 FSDITEERQIRQL---EGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMP 301 +IT + I +L +M + + I + + S + + Sbjct: 943 NRNITSRKLIENELVLSSQVLNSMNEAVVVAGLDYKIRSVNPAFSAITGYSERQITDKYL 1002 Query: 302 IHWAS-------SSHGAEIQNAQSWSATIRQRDGAPAGILQ-----IKTSSGAETSAFIE 349 +H A +S ++ + W I R+ IL ETS F+ Sbjct: 1003 VHLAYKQQRELFNSIEQQLLRHKHWVGEIWIRNKQRKAILVWLEINQVIDIKGETSHFVA 1062 Query: 350 RVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PV 405 DI+ E++K+ Q + L FD +TGLPNR + L+ + +A Sbjct: 1063 VFTDIT--------ERKKAEQDLRFLASFDTLTGLPNRTLFQDRLNHAITQAHRANNIVA 1114 Query: 406 VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDV 464 + + +D + + DS+G+ D L R + ++ + R+ G +F ++ Sbjct: 1115 LLFLDLDRFKHINDSMGHHVGDLLLKAAAKRLQNAVREGDTVARLGGDEFTIILEGVAKT 1174 Query: 465 SNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKN 522 T I++++ P +++DK ++ SIGIS + N D L+ A AM + + Sbjct: 1175 KAATLISEKVLRAFQTPFLLEDKSLTISTSIGISLYPNDADNADSLIKFADTAMYHAKSL 1234 Query: 523 GGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWH 582 G N +QF++ +NE+ ++L A LK+AI N+L LVYQP+ G L G+EAL RWH Sbjct: 1235 GRNNFQFYTHKLNEIATRHVLLEAGLKQAIHRNELSLVYQPKFSLRDGSLTGLEALLRWH 1294 Query: 583 DPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFR 642 G + P FIPLAEE G I IG WVI AC+QLAEW + + +++VNLSA + Sbjct: 1295 HTELGPISPVEFIPLAEETGIINQIGHWVINHACQQLAEWNALGFNNISMAVNLSARQLK 1354 Query: 643 SNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTG 702 + + + A+ G+ L +E+TESM+M + + + L+ +G+ +++DDFGTG Sbjct: 1355 -ADIISTIEVALAVSGLPAQSLELELTESMIMGNPQDSVSILSKLKALGLTIAIDDFGTG 1413 Query: 703 FSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQF 762 +S LS L P+ +KID+ FV + A+ AI ++ SL L VVAEGVET+ Q Sbjct: 1414 YSSLSYLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNVVAEGVETQAQL 1473 Query: 763 EMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 L C +QG+ S+PL A++ + Sbjct: 1474 NFLGLQGCDEVQGFLLSKPLSAKDCLTLL 1502 Score = 97.0 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 103/314 (32%), Gaps = 17/314 (5%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP 67 A++ AL + G N + ++ + + ++ N+ P D Sbjct: 833 RASEERLKLALWASGDGMWDWNIKENKVYRTNMDASVSHWSSHNLLHENM---HPEDREK 889 Query: 68 AHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALV---RD 124 E H + R E ++E G IW V + + + + R+ Sbjct: 890 FKYELAEHLQ----GRTPFFEIEYRIEGAFGKWIWILDRGKVVETDAHMQPMRMTGTNRN 945 Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 + + + ++ ++ V+V + I N AF+ + GY + + L Sbjct: 946 ITSRKLIENELVLSSQVLNSMNEAVVVAGLDYKIRSVNPAFSAITGYSERQITDKYLVHL 1005 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 + N ++Q L + E + + + I + I+ V D+ + V Sbjct: 1006 AYKQQRELFNS--IEQQLLRHKHWVGEIWIRNKQRKAILVWLEINQVIDIKGETSHFVAV 1063 Query: 245 FSDITEERQIRQLEGNI-----LAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNG 299 F+DITE ++ Q + L + + F + N + L Sbjct: 1064 FTDITERKKAEQDLRFLASFDTLTGLPNRTLFQDRLNHAITQAHRANNIVALLFLDLDRF 1123 Query: 300 MPIHWASSSHGAEI 313 I+ + H ++ Sbjct: 1124 KHINDSMGHHVGDL 1137 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 764 bits (1975), Expect = 0.0, Method: Composition-based stats. Identities = 203/862 (23%), Positives = 372/862 (43%), Gaps = 90/862 (10%) Query: 11 DGIFFPALEQNMM-----------GAVLINENDEVMF---------------FNPAAEK- 43 DG F A+ + A + + N ++ N A + Sbjct: 195 DGHFRGAVISKIDLTSLSFLTRQADAFVTDSNGVIILAHDPEMLMMAVTDAKVNRLAAQQ 254 Query: 44 ---LWGYKR-EEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQL------ 93 L+G E+ + LR E H + G+ + Sbjct: 255 RLELYGRTDFPELRITPWQEMADVRLRHIGNEDYPHIQAVTDLPEYGLEIHSEADLPNLP 314 Query: 94 -----EKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRP 148 + + +W +++ ++ +Y +R + +A EQ +L + + + Sbjct: 315 LLLNQRRSNFLLLWLLGSVTLLTVVSLTFYFRSIRQSRSAVAASEQ--RLRLILGSVSNG 372 Query: 149 VIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN-----IPEFPADNRIRLQQLLW 203 + LD + + N A +M GY E ++ +PA+ L+ Sbjct: 373 IWGLDKDGNTTFVNAAAADMLGYTPEELFDKPMHATIHHSYPDGTHYPAERCPMHATLVD 432 Query: 204 KTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILA 263 R + +L + G ++++ S P+ ++ V+ F DI+E RQ + + Sbjct: 433 GKPRMGIDEVLWRKDGSELYVDYSSHPIR-SHGEMEGAVVVFEDISERRQKDEALKLASS 491 Query: 264 AMCSSPPFHEMGE---IICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNA---- 316 SS + + I + + +L +R P + S H A+ Sbjct: 492 VYQSSNDGILVTDEKNRILDVNPAFTRITGYTLEDVRGKDPGIFQSGKHDAQFYQQMWQS 551 Query: 317 ----QSWSATI--RQRDGA----PAGILQIKTSSGAETSAFIERVADISQHMAALALEQE 366 W I +++G I I+ + G+ + + +DI+ E++ Sbjct: 552 ILDDGHWQGEIWDLKKNGELHAKWLSISVIRRADGSIYRH-VGQFSDIT--------EKK 602 Query: 367 KSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLG 422 + + I + FD +T LPNR + + + + +D + + D+ G Sbjct: 603 RKDELIWEQANFDTLTNLPNRRLFADRFRQAISAGARSGRYGALLSLDLDQFKRLNDTFG 662 Query: 423 YAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSN------ITQIADELRN 476 ++ D+ L+EV R ++ + + R+ G +F+++ IA+++RN Sbjct: 663 HSMGDKLLIEVARRLTSCVREEDTVARMGGDEFLVILNGLGSEQNEAAIRAELIAEKIRN 722 Query: 477 VVSKPIMIDDKPFPLTLSIGISYDLG--KNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAM 534 + +P +D + SIGI G + + LL+ AM + G N FF +M Sbjct: 723 ELCRPYQLDKTEHHSSSSIGIVLFRGHSDDPERLLAHVDTAMYQSKAKGRNAICFFDSSM 782 Query: 535 NEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRF 594 E++++R L AL+ A+ + L YQ Q+ +G G EAL RW++ G V P +F Sbjct: 783 QEILEKRGQLETALRGALERKEFLLHYQLQMD-SSGRPIGAEALLRWNNAKLGSVSPVQF 841 Query: 595 IPLAEEIGEIENIGRWVIAEACRQLAEWRSQN-IHIPALSVNLSALHFRSNQLPNQVSDA 653 IP+AEE G I IG WV+ AC QLA W+S + ++VN+SA+ FR +V + Sbjct: 842 IPVAEESGLILPIGHWVLETACAQLARWQSDPRFNRLCIAVNVSAIQFREAAFVAKVRNV 901 Query: 654 MHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLP 713 + GI L +E+TES++++ + +++ L+++GV S+DDFGTG+S LS L LP Sbjct: 902 LQQSGIQPWLLKLELTESLVLDDINDSILKMEALKNLGVKFSMDDFGTGYSSLSYLSRLP 961 Query: 714 VTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVI 773 + ++KID+SFV T++ A+++ I S+ SL + V+AEGVET+EQ E L C+ Sbjct: 962 LDQLKIDQSFVRDITTDQHDAAIVQTIISMALSLGMEVIAEGVETEEQREFLDLRGCQAY 1021 Query: 774 QGYFFSRPLPAEEIPGWMSSVL 795 QGY +++P+P EE+ ++ + Sbjct: 1022 QGYLYAKPMPIEELEIKLAQLT 1043 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 55/252 (21%), Positives = 99/252 (39%), Gaps = 6/252 (2%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A A++ L G ++++ F N AA + GY EE+ + I Sbjct: 354 AVAASEQRLRLILGSVSNGIWGLDKDGNTTFVNAAAADMLGYTPEELFDKPMHATIHHSY 413 Query: 66 RPAHPEYIRHNREGGKARVEG---MSRELQLEKKDGSKIWTRFALSKVSAEGKV-YYLAL 121 P Y V+G M + L +KDGS+++ ++ + + G++ + + Sbjct: 414 -PDGTHYPAERCPMHATLVDGKPRMGIDEVLWRKDGSELYVDYSSHPIRSHGEMEGAVVV 472 Query: 122 VRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 D S + E + + ++V D + I+ N AFT + GY + + G P Sbjct: 473 FEDISERRQKDEALKLASSVYQSSNDGILVTDEKNRILDVNPAFTRITGYTLEDVRGKDP 532 Query: 182 DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNL 241 + + A ++ Q + Q E L + GE SIS + + Sbjct: 533 -GIFQSGKHDAQFYQQMWQSILDDGHWQGEIWDLKKNGELHAKWLSISVIRRADGSIYRH 591 Query: 242 VMTFSDITEERQ 253 V FSDITE+++ Sbjct: 592 VGQFSDITEKKR 603 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 764 bits (1974), Expect = 0.0, Method: Composition-based stats. Identities = 171/633 (27%), Positives = 288/633 (45%), Gaps = 31/633 (4%) Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTR-TGEKIWIKASISPVYDVLAHLQ 239 +++ + + ++L K E+ ++ + W+ +D Sbjct: 317 WTLIVHPDDRIKMDDYLKNEVLAKGKPFDKEYRIVRQTDQSIRWLHGLGKLEFDNDGLPV 376 Query: 240 NLVMTFSDITEERQIRQLEGNILAAMCSSP------PFHEMGEIICRNIESVLNESHVSL 293 +V T DITE+++ + A+ SP E + V S + Sbjct: 377 KMVGTVQDITEQKRASDSLLKLSLAVEQSPNSIVITDLDGKIEYVNNMFIKVTGYSRDEV 436 Query: 294 FA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQIKT---SSGAE 343 L++G A + W I R++D + T + + Sbjct: 437 LGQNPRILKSGKTPQTTFKEMWAHLTRGDIWHGEIINRRKDKSIYIESATITPVKQADGK 496 Query: 344 TSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHN----YLDDLVD 399 + ++ DI+ E++K+ + E L FD +TGLPNR L L+ Sbjct: 497 ITNYVAIKEDIT--------EKKKAEAYTENLAYFDQLTGLPNRRMLQAQVKYRLNMAQS 548 Query: 400 KAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVS 459 V + +D+ +++ DSLG+ DQ L+++ R ++ ++ + R+ G +F+++ Sbjct: 549 NHQPLTVMFLDLDNFKNINDSLGHTVGDQVLIKIAKRIKKAIREVDTVSRLGGDEFIMLF 608 Query: 460 LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMD 517 D + IA L +SK +++ +T SIGI+ + G + LL A AM Sbjct: 609 PNTDANAAMHIATTLIQEISKASVVEHNELTITPSIGIAIYPNDGNDFKTLLKNAETAMY 668 Query: 518 YIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEA 577 ++ + NG+ F +P M L L AL+ A+ N+L+L YQPQI G++ G EA Sbjct: 669 RVKNDSRNGFHFVTPEMQLSASRNLQLENALRHALKRNELQLYYQPQISTSNGQIIGAEA 728 Query: 578 LARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLS 637 L RWH P G + P+ FIP+AE G+I IG WV+ A RQ W ++VNLS Sbjct: 729 LLRWHHPELGMISPAEFIPIAESSGQIIEIGEWVLRTAIRQTKNWMDDGFTPMIIAVNLS 788 Query: 638 ALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVD 697 + FR L ++D + + L +E+TE++ M + + + G+ +S+D Sbjct: 789 VVQFRQKNLLTLITDILAEVQLPNEYLELELTEAVTMHDPESVINVMNTFHEQGIRMSID 848 Query: 698 DFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVE 757 DFGTG+S LS L V ++KID+SF+ + A++ AI + +L L +AEGVE Sbjct: 849 DFGTGYSSLSYLKKFKVYKLKIDQSFIRDISNDPDDRAIVSAIIDMASNLGLQTIAEGVE 908 Query: 758 TKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 T EQ LR C +QGY+FS+PLP+ E + Sbjct: 909 TAEQLAFLRLHGCHEVQGYYFSKPLPSVEFEQF 941 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 83/209 (39%), Gaps = 9/209 (4%) Query: 57 IDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKK-DGSKIWTRFALSKVSAEG- 114 +++ D R +Y+++ A+ + +E ++ ++ D S W L K+ + Sbjct: 317 WTLIVHPDDRIKMDDYLKNEVL---AKGKPFDKEYRIVRQTDQSIRWLHG-LGKLEFDND 372 Query: 115 --KVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYC 172 V + V+D + + + +L +AV+ +++ D + I N F ++ GY Sbjct: 373 GLPVKMVGTVQDITEQKRASDSLLKLSLAVEQSPNSIVITDLDGKIEYVNNMFIKVTGYS 432 Query: 173 ISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVY 232 E G P +L + P + L + E + + A+I+PV Sbjct: 433 RDEVLGQNP-RILKSGKTPQTTFKEMWAHLTRGDIWHGEIINRRKDKSIYIESATITPVK 491 Query: 233 DVLAHLQNLVMTFSDITEERQIRQLEGNI 261 + N V DITE+++ N+ Sbjct: 492 QADGKITNYVAIKEDITEKKKAEAYTENL 520 Score = 75.5 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 7/146 (4%) Query: 3 LTDADNAADGIF--FPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 +T+ A+D + A+EQ+ V+ + + ++ + N K+ GY R+EV+G N +L Sbjct: 385 ITEQKRASDSLLKLSLAVEQSPNSIVITDLDGKIEYVNNMFIKVTGYSRDEVLGQNPRIL 444 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKVYYL 119 P+ R + E+ +KD S ++ V A+GK+ Sbjct: 445 KSG----KTPQTTFKEMWAHLTRGDIWHGEIINRRKDKSIYIESATITPVKQADGKITNY 500 Query: 120 ALVRDASVEMAQKEQTRQLIIAVDHL 145 +++ E + E + + D L Sbjct: 501 VAIKEDITEKKKAEAYTENLAYFDQL 526 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 764 bits (1973), Expect = 0.0, Method: Composition-based stats. Identities = 176/578 (30%), Positives = 276/578 (47%), Gaps = 40/578 (6%) Query: 244 TFSDITEERQIRQLEGNILAAMCSSPPFHEMG---------EIICRNIESVLNESHVSLF 294 +DI + A+ +S + E + + S Sbjct: 376 LIADIAARKHAEHELQLRERAIEASANAIIIARAVAPDYPLEYVNPAFTRITGYSPEEAL 435 Query: 295 ALRNGMPIHWASSSHGAEIQNAQSWSATIR---------QRDGAPAG----ILQIKTSSG 341 G W I+ +S + R ++DGA I +K +G Sbjct: 436 GRNIGF--LWGKDWEQPGIEELRSIALEKREGHAVLRNYRKDGALFWSDLYIAPVKDDTG 493 Query: 342 AETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA 401 E S F+ + DI+ ++ +E D +TGL NR+ L + L + A Sbjct: 494 -EVSHFVVALYDITAT--------KRYESELEFQTNRDALTGLANRSLLRDRLSQAISYA 544 Query: 402 VSPV----VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVL 457 + + +D + V D+LG+ D L + R + ++ + R+ G +FVL Sbjct: 545 HRYNHPIWIAFVDLDRFKFVNDTLGHQAGDLLLKAIAERLQHAVRDTDTVSRMGGDEFVL 604 Query: 458 VSLEN-DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHN 514 + E D T I + + +++P+ I+ F ++ SIG++ + G + L+ A Sbjct: 605 ILPERVDAGLSTGIVQRIMDGIAQPLTIEGHEFFISSSIGVAVYPNDGVTPEELIKHADI 664 Query: 515 AMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYG 574 AM ++ G N +QF++ +MNE ERL L L+ A+ + L YQPQ+ TG++ G Sbjct: 665 AMYRAKETGRNNFQFYTSSMNERALERLRLEGDLRNAMERGEFILHYQPQLDLRTGKIVG 724 Query: 575 IEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSV 634 +EAL RW P G +PP RFI LAEE G I IG WVI EACRQ W+ + +SV Sbjct: 725 VEALIRWQHPELGMIPPMRFIGLAEETGLIVPIGAWVIREACRQNKVWQEHGLGSLRMSV 784 Query: 635 NLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGL 694 NLSA F L ++ A+ + L +E+TES++M ++ L+ +GV L Sbjct: 785 NLSARQFAQQDLLESIALALEETQLPPQCLEIELTESLVMADVDHAIGILRELKALGVQL 844 Query: 695 SVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAE 754 S+DDFGTG+S LS L P+ +KID+SFV+ T+ A++ +I S+ SL LTV+AE Sbjct: 845 SIDDFGTGYSSLSYLKRFPIDVLKIDRSFVNDITTDPDDAAIVASIISLAHSLRLTVIAE 904 Query: 755 GVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 GVET+EQ L++ C IQGYFFSRP+ A+ + + Sbjct: 905 GVETEEQLAYLQQHDCDQIQGYFFSRPITADAMEVMLK 942 Score = 86.3 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 89/262 (33%), Gaps = 19/262 (7%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIV---LDPERHIVQCNRAFTEMFGYCISEAS 177 L+ D + + + + A++ +I+ + P+ + N AFT + GY EA Sbjct: 376 LIADIAARKHAEHELQLRERAIEASANAIIIARAVAPDYPLEYVNPAFTRITGYSPEEAL 435 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 G L ++ L+ + + + G W I+PV D Sbjct: 436 GRNIGFLW-GKDWEQPGIEELRSIALEKREGHAVLRNYRKDGALFWSDLYIAPVKDDTGE 494 Query: 238 LQNLVMTFSDITEER--QIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFA 295 + + V+ DIT + + A+ + + + + I +H A Sbjct: 495 VSHFVVALYDITATKRYESELEFQTNRDALTGLANRSLLRDRLSQAISYAHRYNHPIWIA 554 Query: 296 LRNGMPIHWASSSHGAEIQN------AQSWSATIRQRD------GAPAGILQIKTSSGAE 343 + + + + G + + A+ +R D G ++ + Sbjct: 555 FVDLDRFKFVNDTLGHQAGDLLLKAIAERLQHAVRDTDTVSRMGGDEFVLILPERVDAGL 614 Query: 344 TSAFIERVAD-ISQHMAALALE 364 ++ ++R+ D I+Q + E Sbjct: 615 STGIVQRIMDGIAQPLTIEGHE 636 Score = 66.6 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 87/221 (39%), Gaps = 25/221 (11%) Query: 16 PALEQNMMGAVL---INENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEY 72 A+E + ++ + + + + NPA ++ GY EE +G NI L +D E Sbjct: 395 RAIEASANAIIIARAVAPDYPLEYVNPAFTRITGYSPEEALGRNIGFLWGKDWEQPGIEE 454 Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAE-GKV-YYLALVRDASVEMA 130 +R + EG + L+ +KDG+ W+ ++ V + G+V +++ + D + Sbjct: 455 LRSIAL---EKREGHAV-LRNYRKDGALFWSDLYIAPVKDDTGEVSHFVVALYDITATKR 510 Query: 131 QKEQTRQL------------IIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYC-ISEAS 177 + + + D L + + H + AF ++ + +++ Sbjct: 511 YESELEFQTNRDALTGLANRSLLRDRLSQAISYAHRYNHPIWI--AFVDLDRFKFVNDTL 568 Query: 178 GMQP-DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTR 217 G Q D LL + +R + + D+ +L R Sbjct: 569 GHQAGDLLLKAIAERLQHAVRDTDTVSRMGGDEFVLILPER 609 >UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=4 Tax=Rhizobiaceae RepID=A6U700_SINMW Length = 772 Score = 763 bits (1972), Expect = 0.0, Method: Composition-based stats. Identities = 192/754 (25%), Positives = 331/754 (43%), Gaps = 61/754 (8%) Query: 104 RFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNR 163 ++ G + R + ++ L ++H+ + D E + N Sbjct: 19 NAETRRLIDAGNRLADEVARLFPSQPDIADRHYWLEAMINHVPDYIYAKDTEGRFLIANE 78 Query: 164 AFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLW-KTARDQDEFLLLTRTGEKI 222 G + + D L+ EF +++L E + G Sbjct: 79 VTVADNGLESLQDLVGKTDFDLHPHEFAQAVAGTERRVLETGEPIFGIEERAIVTKGRDR 138 Query: 223 WIKASISPVYDVLAHLQNLVMTFSDITEER---QIRQLEGNILAAMCSSPPFHEMGEIIC 279 W+ S P+ + +V DIT+ + ++ + + +L + P E + Sbjct: 139 WLMTSKVPLRSKSGKIIGIVGISRDITDRKSAERLLEGQARLLEMIAKGKPLTEFFNELV 198 Query: 280 RNIESVLNESHVSLFALRN----------------------GMPIHWASSSHGAEIQNAQ 317 IE++L S+ L + I + S G + Sbjct: 199 LLIEALLPGIKGSILLLSEDGRHLLHGAAPSLDRAYSAAVHALEIGPNAGSCGTAAWRGE 258 Query: 318 ---------------------------SWSATIRQRDGAPAGILQIKTSSGAETSAFIER 350 WS I R+ G + A + Sbjct: 259 QVIVSDVYADPLWADYALLLKSSGLRSCWSTPILSRERKVLGTFALYAHEVATPCEQEQE 318 Query: 351 VADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNY----LDDLVDKAVSPVV 406 + ++ H+A +A+E++++ I L D +TGLPNR L+++ ++ V+ Sbjct: 319 LIAMAAHLAGIAIERKRAEDRISFLAHHDALTGLPNRVLFEEQVDGMLEEIRERDQCAVL 378 Query: 407 YLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVS--LENDV 464 + +D+ + + DSLG+A D+ L V R R ++ ++ R+ G +F+++ L + Sbjct: 379 AFLDLDNFKLINDSLGHAAGDELLKAVAGRMRASVRKADFVVRVGGDEFIILLNGLPKER 438 Query: 465 SNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDL--GKNRDYLLSTAHNAMDYIRKN 522 + +++R+ ++ P+ + + ++ S+G++ G+ LL+ A AM ++ Sbjct: 439 DIVLSRLEDIRSAIAMPLQLQGRSLQVSCSMGVACFPNQGRTAGELLANADMAMYRAKEL 498 Query: 523 GGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWH 582 G + Q F+ M ERL L+EA++ + L +QPQ+ TG ++ EAL RW+ Sbjct: 499 GRDNIQVFTEEMAARAHERLQWQEELREALAGEEFLLHFQPQMNLGTGRIFAAEALLRWN 558 Query: 583 DPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFR 642 P+ G + PS FIPLAEE G I IG W + ACRQL W+ + +SVN+SA FR Sbjct: 559 HPVRGIISPSVFIPLAEETGLIVPIGDWALRAACRQLKAWQDAGLPPLIISVNVSARQFR 618 Query: 643 SNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTG 702 ++V++ + G++ L +E+TES++M+ + L +GV L++DDFGTG Sbjct: 619 ERNWASRVAEILKETGLEARYLELELTESLIMQDVPGAIATMHALEAIGVHLAIDDFGTG 678 Query: 703 FSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQF 762 +S LS L PV +KID+SFV + +A+ AI S+ Q L L V+AEGVE++ Q Sbjct: 679 YSSLSALKRFPVRRLKIDRSFVTDIPLDADDMAITSAIISLAQKLGLRVIAEGVESEAQV 738 Query: 763 EMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLP 796 E L+K C IQGYFFSRPL AE +SS P Sbjct: 739 EFLQKAGCDEIQGYFFSRPLSAEAFESLLSSARP 772 >UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V7A4_9PROT Length = 1013 Score = 763 bits (1971), Expect = 0.0, Method: Composition-based stats. Identities = 199/830 (23%), Positives = 356/830 (42%), Gaps = 62/830 (7%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A N + + L + +G + N + + N +L G +V G ++ L + Sbjct: 204 AMNVSKERYRLLLAHSPVGIFHYDLNFVITYCNARFAELIGCPVAQVNGLDLYNLSDNAV 263 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFA--LSKVSAEGKVYYLALVR 123 PA + G + EG + + DG W S + + +A+V Sbjct: 264 LPA----LTAALAGDRGYFEGQYQAVFN---DG---WIAMTCAASCDARGNVIGGIAIVE 313 Query: 124 DASVEMAQK-----------EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYC 172 + E+ + +D+L + +L + I N F G Sbjct: 314 SIHERKMAEMALALSNQKHDEERKLFQTILDNLPLGMWMLGVDGKIKFVNETFCNALGIA 373 Query: 173 ISEAS-GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV 231 + LL + + E+L T G ++ + + Sbjct: 374 AHDFFDAGHYSDLLPLSIADKCKESDRACFMQGEPHYSTEWLPFT-DGRAHLLEMTRVRL 432 Query: 232 YDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMC--SSPPFHEMGEIICRNIESVLNES 289 +D ++ L+ +DITE +++ AA + +I R ++ + + Sbjct: 433 HDSANNVTGLIGLAADITERQKVESELRIAAAAFEAQEGMLITDRHNVIMRVNQAFTSIT 492 Query: 290 HVSLFALRNGMPIHWASSSHGAEIQNA--------QSWSATI--RQRDGAPAG---ILQI 336 + P AS H A + W + R++DG ++ Sbjct: 493 GYLAEEVLGKNPCFLASGRHDAGFYQSMWEGLNEKGKWEGEVWNRRKDGEIYPEYLLISA 552 Query: 337 KTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDD 396 E + ++ DI+ + + + I++L +DP+T LPNR L + L+ Sbjct: 553 VKDIKNEVANYVATFRDITAN--------KAAESEIKKLAFYDPLTLLPNRRLLTDRLNH 604 Query: 397 LVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEG 452 + + + I +D+ + + D+LG+ D L +V R + ++ D L R+ G Sbjct: 605 ALASSARNRNIGALLFIDLDNFKTLNDTLGHDMGDALLKQVALRLKSCIREDDTLARLGG 664 Query: 453 TQFVLVSLE------NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGK--N 504 +FV++ + + I +++ +++ + + + SIG++ G + Sbjct: 665 DEFVVILENLSELAMDAATKAELIGEKILAALNQVYPLASQEYHGAASIGVTLFAGHALS 724 Query: 505 RDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQ 564 D L+ A AM +K+G N +FF +++ ER L L++A+ QL L YQ Q Sbjct: 725 IDELMKQADIAMYQSKKSGRNTLRFFDLDTQKIINERAELEIELRKAVDKKQLHLHYQIQ 784 Query: 565 IFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRS 624 + + G EAL RW P+ G + P+ FIPLAE+ G I IG+WV+ AC QL W+ Sbjct: 785 LNSV-GTPLSAEALIRWVHPVRGLISPAHFIPLAEDTGLILPIGQWVLDTACAQLHSWQD 843 Query: 625 QNI-HIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKR 683 + L+VN+SA F V + + I+ L +E+TESM++E+ +I Sbjct: 844 ERFTQDLTLAVNVSAKQFHQKNFVALVKETVQRHAINPKLLKLELTESMLVENIEDIIVT 903 Query: 684 IQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSI 743 + LR+MG+ S+DDFGTG+S L L LP+ ++KID+SFV + A++ I ++ Sbjct: 904 MNALREMGIQFSLDDFGTGYSSLQYLKRLPLNQLKIDQSFVRELSSSSSDRAIVRTIVAM 963 Query: 744 GQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 +SLNL V+AEGVET+EQ +L+ I C QGY F +P+P E++ ++ Sbjct: 964 AESLNLNVIAEGVETEEQHTLLQDIGCNYYQGYLFGKPMPIEQLDAILAR 1013 Score = 53.5 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 42/128 (32%), Gaps = 7/128 (5%) Query: 128 EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI 187 E A + + + H + D I CN F E+ G +++ +G+ L + Sbjct: 202 EAAMNVSKERYRLLLAHSPVGIFHYDLNFVITYCNARFAELIGCPVAQVNGLDLYNLSDN 261 Query: 188 PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSD 247 PA L + ++ + G WI + + D ++ + Sbjct: 262 AVLPALTAA----LAGDRGYFEGQYQAVFNDG---WIAMTCAASCDARGNVIGGIAIVES 314 Query: 248 ITEERQIR 255 I E + Sbjct: 315 IHERKMAE 322 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 763 bits (1970), Expect = 0.0, Method: Composition-based stats. Identities = 212/817 (25%), Positives = 369/817 (45%), Gaps = 67/817 (8%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 +A N + + I++ ++ + +E IG + ++P Sbjct: 551 EATNKINAQMQAIFDAFPDILFRIDQQGTILDYKTQDHHSLYCSPQEFIGRTVQEVLPES 610 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRD 124 + E ++ G E +S E L + RF +++ V +A+VRD Sbjct: 611 VGNLLYEGVQKALVSG----EIVSIEYFLIIA----LQKRFFDARIVRLSPVETIAVVRD 662 Query: 125 ASV----EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 S E+A +E +L + +++LD + ++ N A +FG + G Sbjct: 663 ISDRKQTELALRESEERLKTIISTNPNGLLILDLQGKVLFVNPAAEILFGRKQEDLMGQ- 721 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 +L IP + E +L +G+ I ++ + + + Sbjct: 722 ---ILGIPII---------------VNNYSEIEILQPSGKLIIVRMRLVKI--IWQEKNA 761 Query: 241 LVMTFSDITEERQIRQLEGNILAAMCSSP------PFHEMGEIICRNIESVLNESHVSLF 294 + + D+T+ +Q ++ + A SP E + E + + Sbjct: 762 FLASLVDVTDIQQAQEQLKILYQATEQSPVSVVITDAEGTIEYVNPKFEKITGYQRAEVI 821 Query: 295 A-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG----ILQIKTSSGAE 343 L++G I + Q W ++++G I IK + G Sbjct: 822 GQNPRILKSGETTTEEYKQIWKTITSGQEWHGEFHNKKKNGELFWEAASISPIKNAEG-I 880 Query: 344 TSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA-- 401 + F+ DI+ E++ + + +D +TGLPNR + L + +A Sbjct: 881 ITHFVAVKEDIT--------ERKAQQTTLTYQANYDALTGLPNRFLAIDRLKQAILQADR 932 Query: 402 --VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVS 459 V I +DH +DV D+LG+ + D L +V R ++ L+ + R+ G +F+++ Sbjct: 933 QKKRVAVMFIDLDHFKDVNDTLGHEYGDLLLQKVSQRLKQCLRKSDTVARLGGDEFLIIL 992 Query: 460 LE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAM 516 + + IA ++ + + KP + + ++ SIGI+ D G + L+ A AM Sbjct: 993 PNLRETHHCKLIASKILSSLEKPFNLLTEEAFISASIGITLYPDDGNDVSVLMRNADAAM 1052 Query: 517 DYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIE 576 ++ G N ++F++ MNE + RL + L+ A+ N+ LVYQP I + G E Sbjct: 1053 YLGKRGGRNDFKFYTMGMNEEAQSRLRIEKLLRYALKKNEFYLVYQPIIDLRFQTVIGAE 1112 Query: 577 ALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNL 636 AL RW++P G V P +FI +AEE G I +G WVI++AC+++ W++Q ++VNL Sbjct: 1113 ALLRWNNPELGRVSPDQFISIAEETGLISELGAWVISQACQEVVNWQTQG-SPIWVAVNL 1171 Query: 637 SALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSV 696 S FR ++L +S+A+ GI H L +EITE +++E I+ L +M LS+ Sbjct: 1172 SPRQFRESKLLEIISNAITLNGITNHYLELEITEKLLLEDFPGSKGIIEQLHEMDFRLSI 1231 Query: 697 DDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGV 756 DDFGTG+S LS L+ P +KID+SF+ + +LAL++ I ++G L L V+AEGV Sbjct: 1232 DDFGTGYSALSYLIKFPFNRLKIDRSFIADIPHNQEVLALVKTIIAMGHGLKLQVIAEGV 1291 Query: 757 ETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 ET EQ +L C QGYFFSRPL +EE ++ S Sbjct: 1292 ETTEQANILEAEGCDYAQGYFFSRPLLSEEFRRYLQS 1328 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 69/393 (17%), Positives = 133/393 (33%), Gaps = 60/393 (15%) Query: 17 ALEQNMMGAVLINENDEVMFFNPAAEKLWGY-KREEVIGNNIDMLIPRDLRPAHPEYIRH 75 A+ ++ + + + + N A ++W Y +EV+G D + I+ Sbjct: 313 AITSSISAIAIGDLQGNLTYVNQAFLEMWRYDNDDEVLGKPFLNFWQIDQQGET--LIQT 370 Query: 76 NREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEG--KVYYLALVRDASVEMAQKE 133 R G+ EL +KKD S + + + V E +Y + V D S + +E Sbjct: 371 IRTRGQ-----WIGELIAKKKDKSLFKAQVSANLVKNEANIAIYIMISVMDVSQQQGTEE 425 Query: 134 QTRQLIIAVDH----LDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE 189 ++L+ + + D + N + G + +A GM ++ + Sbjct: 426 SLQKLLRLYTNLTQAAPVGIFRADESGKWLYANEKALLISGISLDKAIGMGWANYVHNDD 485 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 ++ + +T+ + E+ G W+ P D + + T +DIT Sbjct: 486 RARVFNEWIKSIQTQTS-WRTEYRYRHSDGNNTWVLVQAIPEMDEQGKIVGYLGTLTDIT 544 Query: 250 EERQIRQLEGNILAAMCS--------------------------SPPFHEMGEIICRNIE 283 E + + I A M + + E I R ++ Sbjct: 545 ERKNAEEATNKINAQMQAIFDAFPDILFRIDQQGTILDYKTQDHHSLYCSPQEFIGRTVQ 604 Query: 284 SVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQR---DGAPAGILQIKTSS 340 VL ES +L L G+ S EI + + + Q+ D + ++T Sbjct: 605 EVLPESVGNL--LYEGVQKALVSG----EIVSIEYFLIIALQKRFFDARIVRLSPVET-- 656 Query: 341 GAETSAFIERVADISQHMAALALEQEKSRQHIE 373 I V DIS +E S + ++ Sbjct: 657 -------IAVVRDISDRKQTELALRE-SEERLK 681 Score = 82.4 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 56/373 (15%), Positives = 121/373 (32%), Gaps = 45/373 (12%) Query: 21 NMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGG 80 +G +E+ + ++ N A + G ++ IG + D R + Sbjct: 441 APVGIFRADESGKWLYANEKALLISGISLDKAIGMGWANYVHNDDR---ARVFNEWIKSI 497 Query: 81 KARVEGMSRELQLEKKDGSKIWTRF-ALSKVSAEGKV-YYLALVRDASVEMAQKEQTR-- 136 + + E + DG+ W A+ ++ +GK+ YL + D + +E T Sbjct: 498 QTQ-TSWRTEYRYRHSDGNNTWVLVQAIPEMDEQGKIVGYLGTLTDITERKNAEEATNKI 556 Query: 137 --QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADN 194 Q+ D + +D + I+ E G +L PE + Sbjct: 557 NAQMQAIFDAFPDILFRIDQQGTILDYKTQDHHSLYCSPQEFIGRTVQEVL--PESVGNL 614 Query: 195 RIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQ- 253 Q + L +K + A I + + DI++ +Q Sbjct: 615 LYEGVQKALVSGEIVSIEYFLIIALQKRFFDARIVRL-----SPVETIAVVRDISDRKQT 669 Query: 254 ---IRQLEGNILAAMCSSPPFHEMGEIICRNI------ESVLNESHVSLFALRNGMPIHW 304 +R+ E + + ++P + ++ + + E + L G+PI Sbjct: 670 ELALRESEERLKTIISTNPNGLLILDLQGKVLFVNPAAEILFGRKQEDLMGQILGIPIIV 729 Query: 305 ASSSHGAEIQNAQSWSATIRQRDGAPAGI-LQIKTSSGAETSAFIERVADISQHMAALAL 363 + S I Q G + +++ E +AF+ + D++ + Sbjct: 730 NNYS-----------EIEILQPSGKLIIVRMRLVKIIWQEKNAFLASLVDVTD------I 772 Query: 364 EQEKSRQHIEQLI 376 +Q + + I Sbjct: 773 QQAQEQLKILYQA 785 Score = 74.3 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 36/261 (13%), Positives = 87/261 (33%), Gaps = 33/261 (12%) Query: 131 QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY-CISEASGMQPDTLLNIPE 189 + + A+ + + D + ++ N+AF EM+ Y E G I + Sbjct: 303 SENRISIKEFAITSSISAIAIGDLQGNLTYVNQAFLEMWRYDNDDEVLGKPFLNFWQIDQ 362 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 L Q + + E + + + S + V + ++++ D++ Sbjct: 363 QG----ETLIQTIRTRGQWIGELIAKKKDKSLFKAQVSANLVKNEANIAIYIMISVMDVS 418 Query: 250 EERQIRQLEGNIL----AAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWA 305 +++ + +L ++P + + + + +S +L + + WA Sbjct: 419 QQQGTEESLQKLLRLYTNLTQAAPVGIFRADESGKWLYANEKALLISGISLDKAIGMGWA 478 Query: 306 SSSHGAE-----------IQNAQSWSATIRQR--DGAPAGILQIKT---SSGAETSAFIE 349 + H + IQ SW R R DG +L + ++ Sbjct: 479 NYVHNDDRARVFNEWIKSIQTQTSWRTEYRYRHSDGNNTWVLVQAIPEMDEQGKIVGYLG 538 Query: 350 RVADISQHMAALALEQEKSRQ 370 + DI+ E++ + + Sbjct: 539 TLTDIT--------ERKNAEE 551 >UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n=2 Tax=Proteobacteria RepID=Q2W1Z2_MAGSA Length = 1510 Score = 762 bits (1968), Expect = 0.0, Method: Composition-based stats. Identities = 217/810 (26%), Positives = 357/810 (44%), Gaps = 59/810 (7%) Query: 25 AVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARV 84 ++ + + N AA + + G +I L PA + I + Sbjct: 723 IMVFDPELFLKRANGAAVRTYDLPLS-ASGMHIGRLK----LPAFLDNIDKSLTAALTEQ 777 Query: 85 EGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTR----QLII 140 S ++ K+ S + +V D + + +EQ R +L+ Sbjct: 778 RKESFQITFGKR---TFQVFVTPSMSMTGTPQSVVLVVVDHTDLVEAQEQIRESQERLLS 834 Query: 141 AVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQ 200 ++H V + D N F E+FG E G L + + R R + Sbjct: 835 IMNHSTSAVSLKDAAGRYEFINMRFEELFGLSAEEVIGKTDQQLFS-RDIAQLLRSRDLE 893 Query: 201 LLWKTARDQ--DEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT----EERQI 254 ++ + + Q +E + T K+W+ + P++D ++ + +D+T E Q+ Sbjct: 894 VMGQLSAIQHLEEMVFPT---SKVWLDSVRFPIFDSNGVVRAVCSQSTDVTMKHHAEEQL 950 Query: 255 RQLEGNILAAMCSSPPFHEMGEIICRNIE--SVLNESHVSLFALRNGMPIHWASSSHGAE 312 R A + G II N + SH + P S HG + Sbjct: 951 RLAAKVFDRAGEAITITDSSGNIITVNDSFCRITGYSHQEVIG---KNPRFLQSGKHGKD 1007 Query: 313 IQNA--------QSWSATI--RQRDGAPAGILQIKT---SSGAETSAFIERVADISQHMA 359 +A W I R+++G ++ +DIS Sbjct: 1008 FYDAMWRSLIEQGCWQGEIFNRRKNGEIYPEWLTVNSVRDENGSVVNYVAIFSDISAI-- 1065 Query: 360 ALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQ 415 + S++ IE L D +TG+PNR+ L + L V +A V I +D+ + Sbjct: 1066 ------KSSQRRIEFLATHDELTGIPNRSLLMDRLKHAVAQAKRQKTKLAVLFIDLDNFK 1119 Query: 416 DVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELR 475 + DSLG+ DQ L + R + ++ L R+ G +FV V + + + +A + Sbjct: 1120 VINDSLGHDVGDQLLKQATERLKHCVRDSDTLARLGGDEFVAVLTDVSLEKVNSVAARIV 1179 Query: 476 NVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPA 533 + + I+DK ++ SIGIS D G++ LL A AM ++ G N +QFF+ Sbjct: 1180 DFLGASFSINDKSLFVSASIGISVFPDDGQDSLTLLKHADTAMYRAKERGRNQYQFFADE 1239 Query: 534 MNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSR 593 M + +RL L L+ A+ ++ YQPQ+ TGE+ G EAL RW DP G V P+ Sbjct: 1240 MKVIALQRLTLETGLRLALETKSFRMCYQPQVDIHTGEVVGAEALLRWRDPTLGEVSPAH 1299 Query: 594 FIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDA 653 FIP+AE G I IG V Q+A WR + + +P +++N+SA R +V Sbjct: 1300 FIPIAESCGLIGAIGETVFTMVLEQIAYWREKGLTVPRIAINVSAHQLRDAGFAAKVGSW 1359 Query: 654 MHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLP 713 + + GI + +E+TES +ME + + + MG+ +S+DDFGTG+S LS L LP Sbjct: 1360 LDSSGISSELIGIELTESALMERIDMVKEMLTSFDGMGMKVSIDDFGTGYSSLSYLKKLP 1419 Query: 714 VTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVI 773 + E+KID+SFVD E+ ++ +AI + ++L + VVAEGVE++EQ +L++ C ++ Sbjct: 1420 IHELKIDRSFVDGIALERDDRSIAKAIIDMSRALGMRVVAEGVESEEQLGVLKEEGCDMV 1479 Query: 774 QGYFFSRPLPAEEIPGWM-----SSVLPLK 798 QGY F RPL E + SS PLK Sbjct: 1480 QGYLFHRPLSPEAFAKVIETGGKSSRKPLK 1509 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 87/256 (33%), Gaps = 8/256 (3%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP 67 + + + L + F N E+L+G EEVIG L RD+ Sbjct: 826 RESQERLLSIMNHSTSAVSLKDAAGRYEFINMRFEELFGLSAEEVIGKTDQQLFSRDI-- 883 Query: 68 AHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVR--DA 125 A R G+ E+ SK+W + V + D Sbjct: 884 AQLLRSRDLEVMGQLSAIQHLEEMVFPT---SKVWLDSVRFPIFDSNGVVRAVCSQSTDV 940 Query: 126 SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 +++ +EQ R D + + D +I+ N +F + GY E G P L Sbjct: 941 TMKHHAEEQLRLAAKVFDRAGEAITITDSSGNIITVNDSFCRITGYSHQEVIGKNP-RFL 999 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 + D + + L + Q E + GE +++ V D + N V F Sbjct: 1000 QSGKHGKDFYDAMWRSLIEQGCWQGEIFNRRKNGEIYPEWLTVNSVRDENGSVVNYVAIF 1059 Query: 246 SDITEERQIRQLEGNI 261 SDI+ + ++ + Sbjct: 1060 SDISAIKSSQRRIEFL 1075 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 762 bits (1968), Expect = 0.0, Method: Composition-based stats. Identities = 197/713 (27%), Positives = 331/713 (46%), Gaps = 45/713 (6%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQC---NRAFT--------EMF 169 +V D + + Q ++ A+ L V+D I+ N ++ + + Sbjct: 377 MVMDVTYALDMLLQAKERANALIALQNAAEVIDASPTILFRWQPNSSWKMEYVSSNVQRW 436 Query: 170 GYCISEASGMQ--PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKAS 227 GY + + LL+ + + + + E + T GE +W++ Sbjct: 437 GYQADDFINGKLTMSDLLHPEDLQRVWAEVIHHIETRHKEYILECRVRTAAGEYLWVENH 496 Query: 228 ISPVYDVLAHLQNLVMTFSDITEERQIRQLEGN---ILAAMCSSPPFHEMGEIICRNIES 284 ++ +D Q +DIT+++ + + + I + + Sbjct: 497 VTTSFDRKGKPQRFTGVMTDITQQKNNELQLRQAAIVFESTREGIVITDAERNIIKVNRA 556 Query: 285 VLNESHVSLFALRNGMPIHWASSSHGAEIQNA--------QSWSATI--RQRDGAPAGIL 334 +++ L P + S H W + R+++G ++ Sbjct: 557 LIDLFGYPENELLGQRPRIFHSGKHDGHFYQQMLQALDEHGFWRGEMWNRRQNGELLPMM 616 Query: 335 QIKT---SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLH 391 S E +I DISQ + S +E + DP+TGLPNR L Sbjct: 617 TSINPVCDSNGEILYYISIYTDISQ--------LKDSEARLEHMALHDPLTGLPNRAMLG 668 Query: 392 NYLDDLVDKA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYL 447 LD + A + ++ +DH ++V DS G+ + D+ L +V R +++L+ + Sbjct: 669 QKLDSALQHAMLNSTRVALLMLDLDHFKNVNDSFGHHFGDELLHQVSARLKQQLRESDVV 728 Query: 448 CRIEGTQFVLVSLEN-DVSNITQIADELRNVVSKPIMIDD-KPFPLTLSIGISY--DLGK 503 CR+ G +F ++ N +++ +A+ + + + +P ++ + + + SIGIS + G Sbjct: 729 CRLGGDEFTVLLQNNPSPDDVSLLAERIIHALHQPFLLSNAREVMIGTSIGISLYPEHGS 788 Query: 504 NRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQP 563 + L+ A AM + +G +G+++FS + K RL L L AI+ + K+ YQP Sbjct: 789 TAEELMQQADTAMYRAKHDGRDGYRYFSEELFLKAKARLELEQRLHRAITGQEFKVFYQP 848 Query: 564 QIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWR 623 QI +T ++ G EAL RW DP +G +PPS FI +AEE G I+NIG WV+ E CRQ +W Sbjct: 849 QISIKTNQIIGAEALLRWDDPEYGLIPPSEFISVAEETGLIQNIGEWVLYETCRQGRDWL 908 Query: 624 SQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKR 683 Q++ L+VNLS L + + +H G H L +E+TES +ME E K Sbjct: 909 DQHLPPINLAVNLSPLQLHHGDVRQLIGTILHNSGFPAHHLELELTESALMEQQEETVKI 968 Query: 684 IQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSI 743 +Q LR G+ +++DDFGTG+S L+ L P+ +KIDK FV+ E+ + + I ++ Sbjct: 969 LQGLRQQGIRIAIDDFGTGYSSLAYLKQFPLDVLKIDKRFVEDIPHERDDMEIAATIVAM 1028 Query: 744 GQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLP 796 G SL LTV+AEGVETK Q E L + C QGY +S PLPAEE +S P Sbjct: 1029 GHSLRLTVLAEGVETKAQLEFLEQQGCDYYQGYLYSMPLPAEEFAQLLSQQNP 1081 Score = 64.7 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 74/223 (33%), Gaps = 42/223 (18%) Query: 18 LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNR 77 E G V+ + ++ N A L+GY E++G + H + Sbjct: 534 FESTREGIVITDAERNIIKVNRALIDLFGYPENELLGQRPRIFHSG----KHDGHFYQQM 589 Query: 78 EGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKV-YYLALVRDASVEMAQKEQT 135 E+ +++G + +++ V + G++ YY+++ D S + + Sbjct: 590 LQALDEHGFWRGEMWNRRQNGELLPMMTSINPVCDSNGEILYYISIYTDISQLKDSEARL 649 Query: 136 RQLII------------------------AVDHLDRPVIVLDPERHIVQCNRAFTEMFGY 171 + + ++ +++LD + H N +F FG Sbjct: 650 EHMALHDPLTGLPNRAMLGQKLDSALQHAMLNSTRVALLMLDLD-HFKNVNDSFGHHFG- 707 Query: 172 CISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLL 214 D LL+ ++R ++ + D+ LL Sbjct: 708 ----------DELLHQVSARLKQQLRESDVVCRLGGDEFTVLL 740 Score = 51.2 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 28/228 (12%), Positives = 75/228 (32%), Gaps = 11/228 (4%) Query: 100 KIWTRFALSKVSAEGKVYYLALVRD------ASVEMAQKEQTRQLIIAVDHLDRPVIVL- 152 W V++L + R ++ E+ R L D + + Sbjct: 50 TFWVSLTTFITGITVGVFFLLVWRQHYMQHRQALSRRVAEKDRLLHHFFDLPLLGMAITT 109 Query: 153 DPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEF 212 + ++ N + +F E + + L + + P D + ++ ++ + E Sbjct: 110 NANGSWLRFNDHLSTLFNLSRDELAELNLLALTHPDDRPYDRQEWMRMQDGESQGYRREK 169 Query: 213 LLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFH 272 + G ++ + + ++ DI+ + E ++ Sbjct: 170 RFVRPDGSMLFALVDTRCIRHPDGSIDCMINVIEDISARK---NSELRLIRQNNLYDMLS 226 Query: 273 EMGEIICRNIESVLNESHVSLFALRNGMPIH-WASSSHGAEIQNAQSW 319 + I R+ + ++ ++ A+RNG + W S++ + S+ Sbjct: 227 LTNQAIVRSQDRLVLLQNICRIAVRNGGFVFAWVSATEQEHSSHVASY 274 Score = 42.0 bits (98), Expect = 0.090, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 5/121 (4%) Query: 25 AVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARV 84 A+ N N + FN L+ R+E+ N+ L D RP + Sbjct: 106 AITTNANGSWLRFNDHLSTLFNLSRDELAELNLLALTHPDDRPY---DRQEWMRMQDGES 162 Query: 85 EGMSRELQLEKKDGSKIWTRFALSKVS-AEGKV-YYLALVRDASVEMAQKEQTRQLIIAV 142 +G RE + + DGS ++ + +G + + ++ D S + + + Sbjct: 163 QGYRREKRFVRPDGSMLFALVDTRCIRHPDGSIDCMINVIEDISARKNSELRLIRQNNLY 222 Query: 143 D 143 D Sbjct: 223 D 223 >UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBJ6_METSD Length = 1150 Score = 761 bits (1967), Expect = 0.0, Method: Composition-based stats. Identities = 207/829 (24%), Positives = 365/829 (44%), Gaps = 50/829 (6%) Query: 1 MKLTDADNAAD-GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDM 59 +K A+ A ++ G + NP ++ GY +E+ D Sbjct: 333 VKTKTAELANQHQRLQQIIDGTAAGTWEWDIRSGDCIVNPRWAEMLGYTPDELEPCTADS 392 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEG----MSRELQLEKKDGSKIWT--RFALSKVSAE 113 HP+ + + +A + G + E + K+G IW R +++ S + Sbjct: 393 CRAL----CHPDDLEQLVQALEAHLRGETDYFASESRRRHKNGHWIWVADRGRVTRRSPQ 448 Query: 114 GKVYYLA-----LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEM 168 G+ ++ + + E K+ Q + + V + D + + C+ + E Sbjct: 449 GEALTMSGTRLEITKLKLAETTLKQAVEQQKMFIQQAPICVAMFDRDMRYLACSNQWQEE 508 Query: 169 FGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASI 228 FG+ G+ + P+ P R Q+ L +++E L + G+ +W + I Sbjct: 509 FGHQQGSLLGLNHYDVH--PDIPEKWRQAHQRALAGERLEEEEDLWIRADGQHLWTRWMI 566 Query: 229 SPVYDVLAHLQNLVMTFSDITEERQIRQLE---GNILAAMCSSPPFHEMGEIICRNIESV 285 +P D +Q ++++ +I+ +Q + + + + I + Sbjct: 567 TPWMDDSQTIQGIIISSENISARKQAEEELRLAHTVFEHSSEAMLVTDADNNIITINPAF 626 Query: 286 LNESHVSLFALRNGMPIHWASSSHGAEIQN--------AQSWSATI--RQRDGAPAGILQ 335 + SL + P +S G E + W I R++ G Sbjct: 627 SEMTGYSLEEVIGKNPKILSSGRQGKEFYQELWNTLETSGEWRGEIWNRRKSGEEYAEWL 686 Query: 336 IKTSSGAETSAF---IERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHN 392 + +E + +DI+ E++++ I +D +T LPNR + Sbjct: 687 AINNIYSEDGKLFRRVALFSDIT--------EKKRADALIWNQANYDLLTQLPNRRLFSD 738 Query: 393 YLDDLVDKAV----SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLC 448 L + K+ + I +D ++V D+LG++ D L+E +R + LK + Sbjct: 739 RLQQEIKKSQHDHSQFALLFIDLDRFKEVNDTLGHSHGDYLLIEASHRIQRHLKETDTVG 798 Query: 449 RIEGTQF-VLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNR 505 R+ G +F V+++ D S +T IA + + ++ P ++ + L+ SIGI+ + Sbjct: 799 RLGGDEFTVIIANLPDPSVMTLIAQRVLDALAAPYDLEGEIVYLSASIGITVFPEDATTS 858 Query: 506 DYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQI 565 LL A AM +KNG N + FF+P M M + R+ + L+ A+ NQ + +QP + Sbjct: 859 AELLKNADQAMYEAKKNGRNRFSFFTPMMQAMAQARMRMMRDLRNALGLNQFTVYFQPIV 918 Query: 566 FAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ 625 + ++ EAL RW P G + P+ FIPLAEE G I IG WV ++ + + + Sbjct: 919 DLSSQRIHKAEALIRWQHPELGFISPAEFIPLAEETGLIHEIGDWVFQQSAQLVKQCIPI 978 Query: 626 NIHIPALSVNLSALHFRSNQLPNQ-VSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRI 684 +SVN S + FR +Q + + G+ GH + VEITE +++ D+ I ++ Sbjct: 979 VGDDFQVSVNKSPVQFRDRTQAHQDWMEYLSGLGLSGHNIVVEITEGLLLNADSGISDKL 1038 Query: 685 QILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIG 744 RD G+ +++DDFGTG+S LS L + +KID+SFV E LAL EAI ++ Sbjct: 1039 LHFRDAGMQVAIDDFGTGYSSLSYLKKFDIDYLKIDQSFVRNLSGEGEDLALCEAIATMA 1098 Query: 745 QSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 L+L V+AEGVET Q ++L +I C QGY FSRP+PAEE + Sbjct: 1099 HKLDLRVIAEGVETTAQRDLLAQIGCDYGQGYLFSRPVPAEEFMQLLER 1147 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 761 bits (1967), Expect = 0.0, Method: Composition-based stats. Identities = 196/835 (23%), Positives = 351/835 (42%), Gaps = 93/835 (11%) Query: 33 EVMFFNPAAEKLWGYKREEVIGNN-IDMLIPRDLRPAHPEYIRHNREGGKARVEGMSREL 91 ++++ + E+L GY +EEV+ ++ + D R A + G+ ++ + Sbjct: 300 QLVWVSENIERLLGYTQEEVMAEGWWNLHVHPDDREAALTHQSELLAVGQ-----LTYDY 354 Query: 92 QLEKKDGSKIWTRFALSKV-SAEGKVY-----YLALVRDASVEMAQKEQTRQLIIAVDHL 145 +L ++G +W L V S GK +L + E+ ++ L + V + Sbjct: 355 RLLHRNGQSVWIHDELRLVRSINGKPLEVVGAWLDVSEHKRTELIRQAHQSALNLIVANQ 414 Query: 146 DRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN--IPEFPADNRIRLQQLLW 203 PVI+ D + + N L + P P D + QL Sbjct: 415 PLPVILKDIAQRLESINPEM-----LVSILLLDQHTGRLKHGEAPSLPDDYNAAIDQLKI 469 Query: 204 -------KTARDQDE-FLLLTRTGEKIWIKA------------SISPVYDVLAHLQNLVM 243 T+ + E ++ W P + + Sbjct: 470 GEGIGSCGTSAWRGEPVIVADIDHHPYWQSYLELTRKANLHACWTIPFKNDAGKVLGTFA 529 Query: 244 TF----SDITEERQIRQLEGNILAAMC------------SSPPFHEMGE----------- 276 + + ++ E +L A+ ++ F E Sbjct: 530 IYHRTPREPSQADLGLINEFALLTALAVQKVYAAESLKQAAAVFESTREGVVITDLQPRI 589 Query: 277 -IICRNIESVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDG 328 I R + S + +++G + A + A W + R+R G Sbjct: 590 VAINRAYAEITGYSEEQVLGKNPRIIKSGRHDKLFYQAMWASLTKAGYWRGEVWNRRRSG 649 Query: 329 APAG---ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLP 385 + + E ++ DI+Q ++S + L +D +TGLP Sbjct: 650 DIYPQWLTISTVFNDRNEPCNYVGVFTDITQI--------KQSEARLAHLAHYDALTGLP 701 Query: 386 NRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKL 441 NR + + L +++ + + +D ++V DSLG+ D+ L+ + R +++L Sbjct: 702 NRLLVQSRLHHAIERTLRHGNQIAALYLDLDRFKNVNDSLGHPIGDELLVMLALRLKKRL 761 Query: 442 KPDQYLCRIEGTQF-VLVSLENDVSNITQIADELRNVVSKPIMI-DDKPFPLTLSIGISY 499 + + L R+ G +F V++ D + +A L ++++ P + + SIGIS Sbjct: 762 REEDTLARLGGDEFLVVLEDIKDSNEPAMVAQTLIDLLATPFSLPSGHEIFINTSIGISL 821 Query: 500 D--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQL 557 + L+ A AM ++ G N +++ + A++ ERLVL L++A+S + Sbjct: 822 FPTDANSVTELIQHADMAMYLAKQEGRNTYRYHTDALSIAANERLVLETQLRQALSAGEF 881 Query: 558 KLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACR 617 L YQP I A G++ G+EAL RW P V P +FIP+AEE G I +G WV+ AC Sbjct: 882 VLHYQPLIDARKGQVMGVEALVRWQPPDKAMVSPGKFIPIAEETGLIVPLGEWVLRTACA 941 Query: 618 QLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHD 677 Q W + ++VNLS F+S L + + + L +E+TESM MEH Sbjct: 942 QGRAWMDADFPPLVMAVNLSVRQFQSENLVELIRQVLEETKLPAACLELELTESMFMEHA 1001 Query: 678 TEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALL 737 + + ++ L+ +GV LS+DDFGTG+S L+ L P+ ++KID+SFV + + Sbjct: 1002 EQSIEILKTLKSLGVRLSIDDFGTGYSSLTYLKRFPIDKLKIDQSFVHGLAYDPNDREIA 1061 Query: 738 EAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 I ++ ++L L V+AEGVE+++Q ++L + C QGY F RP+PA+E+ W Sbjct: 1062 ATIIAMARNLKLDVLAEGVESEQQLDILNQHGCDYYQGYLFHRPVPAQELEVWFR 1116 Score = 66.2 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 99/308 (32%), Gaps = 53/308 (17%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 L R+ + L+ A + + V+ +V + + GY E Sbjct: 264 LARERISLKKTSLRLSDLLAASPTILYNLRVVGTTFQLVWVSENIERLLGYTQEEVMAEG 323 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 L P+ + + Q L + ++ LL R G+ +WI + V + Sbjct: 324 WWNLHVHPD-DREAALTHQSELLAVGQLTYDYRLLHRNGQSVWIHDELRLVRSINGKPLE 382 Query: 241 LVMTFSDITEERQ---IRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALR 297 +V + D++E ++ IRQ + L + ++ P + + I + +ES+ E VS+ L Sbjct: 383 VVGAWLDVSEHKRTELIRQAHQSALNLIVANQPLPVILKDIAQRLESINPEMLVSILLLD 442 Query: 298 ----------------------NGMPIHWASSSHGAEIQNAQ------------------ 317 + + I S G + Sbjct: 443 QHTGRLKHGEAPSLPDDYNAAIDQLKIGEGIGSCGTSAWRGEPVIVADIDHHPYWQSYLE 502 Query: 318 ---------SWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKS 368 W+ + G G I + E S + + + ALA+++ + Sbjct: 503 LTRKANLHACWTIPFKNDAGKVLGTFAIYHRTPREPSQADLGLINEFALLTALAVQKVYA 562 Query: 369 RQHIEQLI 376 + ++Q Sbjct: 563 AESLKQAA 570 Score = 64.3 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 67/208 (32%), Gaps = 18/208 (8%) Query: 16 PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRH 75 E G V+ + ++ N A ++ GY E+V+G N ++ H + Sbjct: 571 AVFESTREGVVITDLQPRIVAINRAYAEITGYSEEQVLGKNPRIIKSGR----HDKLFYQ 626 Query: 76 NREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYLALVRDASVEMAQKE 133 + E+ ++ G W + Y+ + D + + Sbjct: 627 AMWASLTKAGYWRGEVWNRRRSGDIYPQWLTISTVFNDRNEPCNYVGVFTDITQIKQSEA 686 Query: 134 QTRQLII--AVDHLDRPVIV-----LDPERHIVQCNRAFTEMFGY----CISEASGMQ-P 181 + L A+ L ++V ER + N+ ++++ G Sbjct: 687 RLAHLAHYDALTGLPNRLLVQSRLHHAIERTLRHGNQIAALYLDLDRFKNVNDSLGHPIG 746 Query: 182 DTLLNIPEFPADNRIRLQQLLWKTARDQ 209 D LL + R+R + L + D+ Sbjct: 747 DELLVMLALRLKKRLREEDTLARLGGDE 774 >UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KEH4_CYAP7 Length = 1027 Score = 761 bits (1966), Expect = 0.0, Method: Composition-based stats. Identities = 214/824 (25%), Positives = 379/824 (45%), Gaps = 73/824 (8%) Query: 3 LTDADNAADGI------FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNN 56 +T+ NA + + IN+ ++ + ++L EEVIG + Sbjct: 236 MTEQKNAEEVTTHINQEIQALFDAFPDILFRINDQGIILDYKLQEQQLLSTAPEEVIGKS 295 Query: 57 IDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV 116 I + P E I + G +V + L LE + RF +++ + Sbjct: 296 IQEVFP--------EPIGNQLYEGIQQVLLTRQPLSLEYSLNIEDKKRFFEARIVQLNQT 347 Query: 117 YYLALVRDAS----VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYC 172 +A++RD S E+A +E +L + +++LD E ++ N A +FG Sbjct: 348 EIIAVIRDISARKHTELALRESEERLSTIISTNPNGLLILDREGKVLFVNPAAEILFGRP 407 Query: 173 ISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIK-----AS 227 + G +L +P + ++L T + + R + +W + AS Sbjct: 408 KKDLMGQ----ILGLPIIVNNYSEI--EILQPTGKM---VIARIRQVKILWEEKEAFLAS 458 Query: 228 ISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLN 287 + V D+ + L TE+ + + + + E + R E + Sbjct: 459 LVDVTDLKGAQKQL-KILKQATEQSPVSVIITDAEGHI----------EYVNRKFEKLTG 507 Query: 288 ESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG----ILQI 336 + + L++G + + Q W ++++G I I Sbjct: 508 YTRQEVIGKNPRLLKSGKISQDQYKQLWRTLTSGQEWHGEFHNQKKNGELFWESASISPI 567 Query: 337 KTSSGAETSAFIERVADISQHMAALALEQEKSRQHI-EQLIQFDPMTGLPNRNNLHNYLD 395 K G + FI DI+ + K++ I +D +TGLPNR + L Sbjct: 568 KNEEGV-ITHFIAIKEDIT---------RRKAQDRILAYQANYDALTGLPNRFLAIDRLK 617 Query: 396 DLVDKA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIE 451 + +A V I +D ++V D+LG+ + D L +V R ++ L+ + R+ Sbjct: 618 LAILQAERQEQRVAVMFIDLDRFKNVNDTLGHEYGDLLLKQVAERLKKCLRKSDTVARLG 677 Query: 452 GTQF-VLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYL 508 G +F +++ S+ IA ++ + + KP + ++ ++ SIGI+ D G + + L Sbjct: 678 GDEFLIIIPNLKQPSHCKGIAKKILSSLEKPFNLLEEEAFISASIGITLYPDDGDDVNAL 737 Query: 509 LSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAE 568 + A AM ++ G N ++F++ MNE + R+++ L +A+ ++ LVYQP + + Sbjct: 738 MRNADTAMYLGKRGGRNDFKFYTLGMNETNRTRIIIENLLHQALKKKEIYLVYQPIMELK 797 Query: 569 TGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIH 628 T ++ G EAL RW++P G V P +FIP+AEE G I +G WVI++AC+++ +W++Q Sbjct: 798 TEKVIGAEALLRWNNPQLGQVSPDQFIPIAEETGLINQLGAWVISQACQEVVQWKAQG-T 856 Query: 629 IPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILR 688 +++VNLS FR ++L ++DA+ GI H L +EITE +++E + L Sbjct: 857 PISVAVNLSPRQFRDSKLLKIITDAIAVNGITNHDLELEITEKLLLEDSPGSQGILSQLH 916 Query: 689 DMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLN 748 M LS+DDFGTG+S LS L+ P +KID+SF+ ++ + L++ I ++ LN Sbjct: 917 QMNFPLSIDDFGTGYSALSYLIKFPFNRLKIDRSFITDMTHSQKAMGLVKTIIAMSHGLN 976 Query: 749 LTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 L V+AEGVET EQ L+ C QGYFFSRPL EE ++ Sbjct: 977 LQVIAEGVETSEQLNSLKSQGCDYAQGYFFSRPLTGEEFRYYLQ 1020 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 761 bits (1965), Expect = 0.0, Method: Composition-based stats. Identities = 202/814 (24%), Positives = 353/814 (43%), Gaps = 48/814 (5%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP 67 + + ++++N + F+ L E +G +P + Sbjct: 230 RDREMKLAALIASLPDLMFVVDQNRCIAEFHAPDPGLLLTPPECFLGRPYARTLPPAVVV 289 Query: 68 AHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASV 127 E + G A+ + +L + S +R A S + EG ++ LVRD + Sbjct: 290 KLDEALEEISATGGAKQVEYTLDLPRGRHHFSASVSRLAGSGLVPEG---FIVLVRDLTE 346 Query: 128 EMAQKEQT----RQLIIAVDHLDRPVIVLDP-ERHIVQCNRAFTEMFGYCISEASGMQPD 182 + ++ + + ++V+DP + IV+ N E +GY + M+ + Sbjct: 347 RVRMEQALIESELRYRELFANSRVVMLVIDPVDGRIVEANAKACEYYGYDPVSLTRMKIE 406 Query: 183 TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 + P +++ D G+ ++ + SP+ +A + L Sbjct: 407 DINVPGREPLRF-----EMVQARKPDTFRCCHRLAGGQLRDVEVASSPI--EIAGRKLLY 459 Query: 243 MTFSDITEERQIRQLEGN---ILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNG 299 D+TE ++ + + A + +I + + + Sbjct: 460 SIVRDVTERKRFEERMRQAMVVFKASSQGIMTTDAQGVITSVNPAFCTITGYLAAEVIGR 519 Query: 300 MPIHWASSSH--------GAEIQNAQSWSATI--RQRDG----APAGILQIKTSSGAETS 345 + H I + SW+ + R+ DG I ++ + G + Sbjct: 520 KSSMFKPERHEATFFDAMWTSIVESGSWAGEVWSRRSDGDRYPQWVTITAVRDTDGR-IA 578 Query: 346 AFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPV 405 ++ +DI+ E+++ + + FDP+TGL NR+ L + LD + A Sbjct: 579 EYVTLFSDIT--------ERKQQEVAMWRQANFDPLTGLANRSLLQDRLDRALAHARRHG 630 Query: 406 ----VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSL 460 + + +D + + DSLG+ D+ L++V R ++ + + R+ G +F V+V Sbjct: 631 CKVGLLFLDLDGFKWINDSLGHDVGDELLVDVARRLNSCVRDEDTVARLGGDEFTVVVHD 690 Query: 461 ENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDY 518 D +++ IAD+L V+ +P + ++ S+GI+ D G + LL A AM Sbjct: 691 LADRADLGAIADKLVAVLREPFALRGARHHISGSVGITVFPDDGDDVQTLLRNADIAMYK 750 Query: 519 IRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEAL 578 ++ G N Q ++P M R+ L A L+ A+ +L YQP + +G L G EAL Sbjct: 751 AKQAGKNRAQPYAPHMQADALARVHLEADLRMAVEQRAFELHYQPIVDCASGALVGAEAL 810 Query: 579 ARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSA 638 RW P G + P FIP+AEE G I IG WV+ E RQ +W ++ L++N+S Sbjct: 811 IRWKHPERGMISPLEFIPVAEECGLIVPIGEWVLREVVRQRRDWLARGHPPLRLTLNVSG 870 Query: 639 LHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDD 698 + FR LP V + +G L EITES++M + R+ +++ G+ ++DD Sbjct: 871 VQFREAGLPELVRTLLAEFGTARSSLVFEITESVLMGGSENVEARMCDIKEQGICFALDD 930 Query: 699 FGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVET 758 FGTGFS LS L PV +KID+SFV C ++ L+EAI ++ SL L V AEGVE+ Sbjct: 931 FGTGFSSLSYLKRFPVDIVKIDRSFVRDCPDDRNDATLVEAIINMAHSLGLRVTAEGVES 990 Query: 759 KEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 EQ E LR + C +QGY +PL A+ M+ Sbjct: 991 AEQREFLRALGCDYLQGYLIGKPLAADAFEALMA 1024 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 57/305 (18%), Positives = 102/305 (33%), Gaps = 30/305 (9%) Query: 90 ELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPV 149 +L+ + D + ++ SAE + L R SV ++Q R+L A++ + Sbjct: 67 QLRAHRAD-----LQRLVAARSAEVRAREAELDRAQSVAHVGEQQLRKLSTAIECSPASI 121 Query: 150 IVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQ 209 ++ D I N F GY E G P L + + + + Sbjct: 122 VITDRSGTIEYVNPQFERSTGYTAQEVVGKNPRILKSGNRSADEYAAMWATITHGH-VWR 180 Query: 210 DEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT----EERQIRQLEGNILAAM 265 EF + + G W +ASI+P+ + V DIT ER++R E + A + Sbjct: 181 GEFENVRKDGAHYWERASIAPIRADDGMISGFVAVKEDITLQKRAERELRDREMKLAALI 240 Query: 266 CSSPPFHEMGE--------------IICRNIESVLNESHVSLFALRNGMPIHWASSSHGA 311 S P + + ++ E L + + + A A Sbjct: 241 ASLPDLMFVVDQNRCIAEFHAPDPGLLLTPPECFLGRPYARTLPPAVVVKLDEALEEISA 300 Query: 312 EIQNAQSWSATIRQRDGAPAGILQIKT--SSGAETSAFIERVADISQHMAALALEQEKSR 369 A+ T+ G + SG FI V D+++ + +EQ Sbjct: 301 T-GGAKQVEYTLDLPRGRHHFSASVSRLAGSGLVPEGFIVLVRDLTERV---RMEQALIE 356 Query: 370 QHIEQ 374 + Sbjct: 357 SELRY 361 Score = 95.9 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 94/249 (37%), Gaps = 12/249 (4%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 A+E + V+ + + + + NP E+ GY +EV+G N +L + + Sbjct: 110 LSTAIECSPASIVITDRSGTIEYVNPQFERSTGYTAQEVVGKNPRILKSGNRSADEYAAM 169 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLALVRDASVEMAQ 131 E + +KDG+ W R +++ + A+ + ++A+ D +++ Sbjct: 170 ----WATITHGHVWRGEFENVRKDGAHYWERASIAPIRADDGMISGFVAVKEDITLQKRA 225 Query: 132 KEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI 187 + + R +L + L + V+D R I + + + G L Sbjct: 226 ERELRDREMKLAALIASLPDLMFVVDQNRCIAEFHAPDPGLLLTPPECFLGRPYARTLP- 284 Query: 188 PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSD 247 P L+++ Q E+ L G + AS+S + + ++ D Sbjct: 285 PAVVVKLDEALEEISATGGAKQVEYTLDLPRGRHHF-SASVSRLAGSGLVPEGFIVLVRD 343 Query: 248 ITEERQIRQ 256 +TE ++ Q Sbjct: 344 LTERVRMEQ 352 >UniRef50_B2SVB0 C-di-GMP phosphodiesterase A n=11 Tax=Xanthomonas RepID=B2SVB0_XANOP Length = 747 Score = 760 bits (1964), Expect = 0.0, Method: Composition-based stats. Identities = 209/735 (28%), Positives = 352/735 (47%), Gaps = 55/735 (7%) Query: 115 KVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS 174 + + + E ++ ++R L A+D +++ D + ++ N F MFGY + Sbjct: 12 RPGPVTAGMAKAGEQPEQRRSRLLAEALDGSSSAILICDLQSRLLYANDGFQRMFGYTEA 71 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 E G +P +L + R++ + E L+ + G +WI + +P+YD Sbjct: 72 ELVGQRPSDVLTRAQSDQSEVARVRDRADALQHTRAELLVYRKDGTPLWISLNFNPIYDA 131 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLF 294 + V +DIT+ + L+ +L A+ P E+ +IC +E + + ++ Sbjct: 132 DHTPLHYVAVLTDITDTKMHEVLQHRVLEALLQERPLIEVMTLICTEVERIAPDVLAAVT 191 Query: 295 ALRN---------------------GMPIHWASSSHGAEIQNAQ---------------- 317 + N G+ I + + G + Sbjct: 192 SADNQGRLHSLAAPSLPPEYADAVNGLKIGPGAGACGTAAWRGRAVMVEDIATDPLFEPC 251 Query: 318 -----------SWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQE 366 WS IR G + +A+ R+ D+ Q + LALE+E Sbjct: 252 RETMLRWDLHACWSTPIRSNSARVLGTFALYYRKPQHANAWHMRLTDLCQQLCTLALERE 311 Query: 367 KSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV----SPVVYLIGVDHIQDVIDSLG 422 + RQ + QL +D +TGLPNR + + +A + I +D + + DS G Sbjct: 312 QIRQRVHQLAFYDTLTGLPNRIMFSARAEQALTQAEYAGEPAALVFINIDRFKLINDSQG 371 Query: 423 YAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPI 482 +A D L ++ R ++L L R+ G +F L + + +A+ + ++ P+ Sbjct: 372 HAAGDGLLRDIALRINDQLTATAMLARLSGDEFALALPQCSAEQASAVAERVLVSIANPL 431 Query: 483 MIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKE 540 + + SIG++ + G+ + LL A AM+ +K GG ++FFS MN M +E Sbjct: 432 PVGHMTVHPSASIGVAMFPEDGREINILLRHADLAMNRAKKEGGGRFRFFSADMNRMAQE 491 Query: 541 RLVLGAALKEAISNNQLKLVYQPQI-FAETGELYGIEALARWHDPLHGHVPPSRFIPLAE 599 R+ L A L++AI +QL+L YQPQI A LYG+EAL RW+ P G V P++F+ +AE Sbjct: 492 RVALEAELRQAIGRDQLQLHYQPQIHSAAPHTLYGVEALLRWNHPQLGAVSPAQFLQVAE 551 Query: 600 EIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGI 659 E G + I WV+ AC+Q+A+WR + + + +SVNLSA F S ++ + + + G+ Sbjct: 552 EQGMMPQINAWVLRSACQQVADWRQRGVPVARVSVNLSASGFESPRMLSDLLQLIADMGV 611 Query: 660 DGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKI 719 LT+E+TES+M+ + + + +R+ G+ LS+DDFGTG+S LS L LP+ E+K+ Sbjct: 612 KPSDLTLELTESVMLSGQPGVLENLHAIREAGISLSLDDFGTGYSSLSHLHRLPIDELKL 671 Query: 720 DKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFS 779 D SFV + AL+ ++ IG+ L VVAEGVE + Q L + C V+QGY FS Sbjct: 672 DMSFVRDIEHSEDARALITSVLRIGEHLRKHVVAEGVENEAQRLFLADLGCEVLQGYLFS 731 Query: 780 RPLPAEEIPGWMSSV 794 RPLPA + W+ + Sbjct: 732 RPLPAAALEAWLGAQ 746 Score = 67.4 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 57/137 (41%), Gaps = 6/137 (4%) Query: 13 IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEY 72 + AL+ + ++ + +++ N ++++GY E++G ++ R Sbjct: 34 LLAEALDGSSSAILICDLQSRLLYANDGFQRMFGYTEAELVGQRPSDVLTRAQSDQSEVA 93 Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRDASV-EM 129 +R ++ EL + +KDG+ +W + + ++Y+A++ D + +M Sbjct: 94 RVRDRADA---LQHTRAELLVYRKDGTPLWISLNFNPIYDADHTPLHYVAVLTDITDTKM 150 Query: 130 AQKEQTRQLIIAVDHLD 146 + Q R L + Sbjct: 151 HEVLQHRVLEALLQERP 167 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 760 bits (1963), Expect = 0.0, Method: Composition-based stats. Identities = 198/721 (27%), Positives = 330/721 (45%), Gaps = 37/721 (5%) Query: 101 IWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQ 160 ++TR+ L ++ L+ + + VD + +I DP I+ Sbjct: 340 LFTRYRLPASISDSLASLADLIALGLERKQNENRLLTQARIVDQIRDAIITTDPAGLIMT 399 Query: 161 CNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGE 220 N+ +FGY EAS +P + L P + ++ L + Q E + T+ G+ Sbjct: 400 WNQGAQRLFGYTAQEAS-HRPLSFLLAPHELDFYQGQVLPQLRERLSYQIEIEVQTKHGD 458 Query: 221 KIWIKASISPVYDVLAHLQ--NLVMTFSDITEERQIRQLEG---NILAAMCSSPPFHEMG 275 + + S++ ++ DITE ++ + L + + Sbjct: 459 RRFADFSLTQFSPEGGGSTRGGIICYARDITERQKREERMRLSSRFLEDTNEAVVITDAD 518 Query: 276 EIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQN--------AQSWSATI--RQ 325 I + + S P S + A+ W + R+ Sbjct: 519 ARIIEVNRAFEKLTGYSRQEAIGQNPRILQSGHYDADFYREMWDTLLTTGHWEGELWSRR 578 Query: 326 RDGA----PAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPM 381 ++ I + G + ++ D++ +++++ +E+L +D + Sbjct: 579 KNNELHPKWLSISAVYDQRGR-ITHYVGISNDLTAT--------KQTQEKLEELTHYDQL 629 Query: 382 TGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRF 437 T LPN + L + +A + + +D ++V DSLG++ D L EV R Sbjct: 630 TSLPNILLFRDRLQQAMARARREEHKVALLIFDLDRFKEVNDSLGHSVGDLVLTEVAQRL 689 Query: 438 REKLKPDQYLCRIEGTQF-VLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIG 496 R++L +CR G +F +L+ D+ Q A + + SKP D LT SIG Sbjct: 690 RQQLSLADTICRPGGDEFYLLLGRLTDIDTAVQAAQNVLELFSKPFQAADHQLYLTPSIG 749 Query: 497 ISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISN 554 I+ D G+ + L+ + AM + +K+GGN +QFF M R+ + L+ A+ Sbjct: 750 ITLFPDDGEEVESLIQSVETAMYHAKKDGGNSFQFFQETMFTAALGRMTMKNRLRRAVEL 809 Query: 555 NQLKLVYQPQIFAETGELYGIEALARWHDPLHG-HVPPSRFIPLAEEIGEIENIGRWVIA 613 + +L YQP+I A+ + G EAL RW P G V P+ FIPLAEE G I IG WV+ Sbjct: 810 EEFELYYQPKIAADGRTVVGAEALIRWVQPERGGPVSPAEFIPLAEETGLIIPIGEWVLR 869 Query: 614 EACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMM 673 +ACRQ W+ + ++VNLSA+ F+ L ++++ + G+ L +EITES++ Sbjct: 870 QACRQSLLWQQAGLPPLRIAVNLSAVQFKQPGLDDEINWILQEIGLPAELLELEITESLL 929 Query: 674 MEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRI 733 ME T + L+DMG+ L++DDFGTG+S LS L + P+ +KID+ FV T+ Sbjct: 930 MEDVTTANATLWKLKDMGIHLALDDFGTGYSSLSYLKNFPLDTLKIDREFVRDLSTDDED 989 Query: 734 LALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 A++ I ++ SL + VVAEGVE +Q LR+ C V QGY FSRPLPA+E ++ S Sbjct: 990 RAVIITIITLAHSLKMEVVAEGVEDADQVAFLRQRGCDVFQGYHFSRPLPAKEFEQFLRS 1049 Query: 794 V 794 Sbjct: 1050 Q 1050 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 70/353 (19%), Positives = 139/353 (39%), Gaps = 16/353 (4%) Query: 16 PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI-PRDLRPAHPEYIR 74 ++Q + + +M +N A++L+GY +E + L+ P +L + + Sbjct: 379 RIVDQIRDAIITTDPAGLIMTWNQGAQRLFGYTAQEASHRPLSFLLAPHELDFYQGQVLP 438 Query: 75 HNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEG----KVYYLALVRDASVEMA 130 RE ++ E++++ K G + + F+L++ S EG + + RD + Sbjct: 439 QLRERLSYQI-----EIEVQTKHGDRRFADFSLTQFSPEGGGSTRGGIICYARDITERQK 493 Query: 131 QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEF 190 ++E+ R ++ + V++ D + I++ NRAF ++ GY EA G P +L + Sbjct: 494 REERMRLSSRFLEDTNEAVVITDADARIIEVNRAFEKLTGYSRQEAIGQNP-RILQSGHY 552 Query: 191 PADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITE 250 AD + L T + E + E SIS VYD + + V +D+T Sbjct: 553 DADFYREMWDTLLTTGHWEGELWSRRKNNELHPKWLSISAVYDQRGRITHYVGISNDLTA 612 Query: 251 ERQIRQLEGNI--LAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSS 308 +Q ++ + + S P + + + + E H + + + S Sbjct: 613 TKQTQEKLEELTHYDQLTSLPNILLFRDRLQQAMARARREEHKVALLIFDLDRFKEVNDS 672 Query: 309 HGAEIQNAQSWSATIRQRDGAPAGIL-QIKTSSGAETSAFIERVADISQHMAA 360 G + + QR + I G E + R+ DI + A Sbjct: 673 LGHSV--GDLVLTEVAQRLRQQLSLADTICRPGGDEFYLLLGRLTDIDTAVQA 723 Score = 50.4 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 77/222 (34%), Gaps = 20/222 (9%) Query: 116 VYYLALVRDASVEMAQKE---QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYC 172 +++L L + S Q+E + QL A + + + +FG Sbjct: 60 IFWLILHQIQSHRRVQQELMVSSSQLRKAQQIAKMGHWEWKHDDQPLHWSAELYRIFGQD 119 Query: 173 ISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTR----TGEKIWIKASI 228 PD + P D+R ++Q+ + T R+ + + R G + I Sbjct: 120 PE---SYTPDYQAFLATIPEDDRRQVQEAVAHTQREGVPYDITHRIRLPNGREKIIHERG 176 Query: 229 SPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMC----------SSPPFHEMGEII 278 + D ++ T D+T ++Q + N L + + Sbjct: 177 ELIRDEQGRPVKMMGTAQDVTAQKQAEEELQNRLRLLALNAEMGMALTQDRSLEANLQTC 236 Query: 279 CRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWS 320 C+ + + L+ + ++ + + + ++S G E + +S Sbjct: 237 CQALVNHLDAALARIWLIPDHESVLLLAASAGLETRLDGEFS 278 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 758 bits (1959), Expect = 0.0, Method: Composition-based stats. Identities = 188/698 (26%), Positives = 316/698 (45%), Gaps = 37/698 (5%) Query: 122 VRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 + +E + R + + +L + D + + N + + + G Sbjct: 125 IMHKRMERELENSNRLFRVFMQNLPAIAFIKDQQGQYIFANASTVDALQLPHEQIIGKH- 183 Query: 182 DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNL 241 DTLL P+ + R QQ L + Q K+W+ + PV D+ + ++ Sbjct: 184 DTLLFPPQLAQEMRAAEQQTLAQGEAIQHVRQFPLADDVKLWL-LTTFPVQDMDGNFNHI 242 Query: 242 VMTFSDITEERQIRQL---EGNILAAMCSSPPFHEMGE------IICRNIESVLNESHVS 292 DITE+R+ + + + A + ++ + + R E V S Sbjct: 243 GGIGIDITEQRKAEEALLLRNHAIEASATPILIVDVTQPAMPLIYVNRAFELVTGYSSQE 302 Query: 293 LFA-----LRNGMPIHWASSSHGAEIQNAQSWSATIR--QRDGAPAG----ILQIKTSSG 341 L+ I+ A +R ++DG+ + + G Sbjct: 303 AVGRNCRFLQGHDREQPELEKIRTAIRERCPGYAILRNYRKDGSLFWNELYVAPVPDPHG 362 Query: 342 AETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA 401 E F+ DI+ E + ++ +E+ +D +TGL NRN L + + +A Sbjct: 363 GEPRYFVGVQKDIT--------EIRQYQEALERQANYDTLTGLANRNLLKERMQQAISEA 414 Query: 402 VSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVL 457 V I +D+ + V DS+G++ D+ + + R + L+ + R+ G +FVL Sbjct: 415 RRHNWTFSVAFIDIDNFKRVNDSMGHSAGDELIRLLGQRLQSCLRDGDTVARLGGDEFVL 474 Query: 458 VSLENDVSN-ITQIADELRNVVSKPIMIDDKPFPLTLSIGIS--YDLGKNRDYLLSTAHN 514 + + I + +RN + P +I + +T SIG++ G+N D LLS A + Sbjct: 475 LLTSQSLDESIHTVVQRIRNTIINPFIITGRQLTVTCSIGLANFPHDGRNADTLLSNADS 534 Query: 515 AMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYG 574 AM + +G N ++F++ MN + RL L L A+ N QL L YQPQ+ ++ G Sbjct: 535 AMYQAKASGSNNFRFYAKEMNAELGHRLSLENDLWHALENQQLVLHYQPQVCMRNSQIIG 594 Query: 575 IEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSV 634 +EAL RW P G +PP +FIPL+E+ G I IG WV+ A Q + + ++V Sbjct: 595 MEALIRWQHPKLGMIPPLQFIPLSEDDGLIVPIGIWVMETAAHQNRQLQLAGYPPIRVAV 654 Query: 635 NLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGL 694 NLS L + + + G+D L +EITESM+M + E + + D+GV L Sbjct: 655 NLSVRQLEQKDLVHCIEKTLQHSGLDPQCLELEITESMLMHNIEESIITLNRISDLGVQL 714 Query: 695 SVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAE 754 S+DDFGTG+S LS L LP+ +KIDKSF++ T + +I ++ SL + V+AE Sbjct: 715 SLDDFGTGYSSLSYLKRLPINRLKIDKSFINDITTTYNDAIIARSIIALAHSLEIQVIAE 774 Query: 755 GVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 GVE+ +Q+ L + C +QGY SRP P EE+ + Sbjct: 775 GVESADQYAFLLENGCDEVQGYLLSRPRPFEEMEALLR 812 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 96/265 (36%), Gaps = 11/265 (4%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLI-NENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 K + + F QN+ I ++ + +F N + E++IG + +L Sbjct: 128 KRMERELENSNRLFRVFMQNLPAIAFIKDQQGQYIFANASTVDALQLPHEQIIGKHDTLL 187 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL- 119 P L + +R + A+ E + Q D K+W +G ++ Sbjct: 188 FPPQL----AQEMRAAEQQTLAQGEAIQHVRQFPLADDVKLWLLTTFPVQDMDGNFNHIG 243 Query: 120 ALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLD---PERHIVQCNRAFTEMFGYCISEA 176 + D + + +E A++ P++++D P ++ NRAF + GY EA Sbjct: 244 GIGIDITEQRKAEEALLLRNHAIEASATPILIVDVTQPAMPLIYVNRAFELVTGYSSQEA 303 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL- 235 G L + +++ + + + G W + ++PV D Sbjct: 304 VGRNC-RFLQGHDREQPELEKIRTAIRERCPGYAILRNYRKDGSLFWNELYVAPVPDPHG 362 Query: 236 AHLQNLVMTFSDITEERQIRQLEGN 260 + V DITE RQ ++ Sbjct: 363 GEPRYFVGVQKDITEIRQYQEALER 387 Score = 72.8 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 59/149 (39%), Gaps = 12/149 (8%) Query: 1 MKLTDADNAADGIFFP--ALEQNMMGAVLIN---ENDEVMFFNPAAEKLWGYKREEVIGN 55 + +T+ A + + A+E + ++++ +++ N A E + GY +E +G Sbjct: 247 IDITEQRKAEEALLLRNHAIEASATPILIVDVTQPAMPLIYVNRAFELVTGYSSQEAVGR 306 Query: 56 NIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA--- 112 N L D E IR + R G + L+ +KDGS W ++ V Sbjct: 307 NCRFLQGHDREQPELEKIR---TAIRERCPGYAI-LRNYRKDGSLFWNELYVAPVPDPHG 362 Query: 113 EGKVYYLALVRDASVEMAQKEQTRQLIIA 141 Y++ + +D + +E + Sbjct: 363 GEPRYFVGVQKDITEIRQYQEALERQANY 391 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 758 bits (1958), Expect = 0.0, Method: Composition-based stats. Identities = 163/528 (30%), Positives = 268/528 (50%), Gaps = 16/528 (3%) Query: 273 EMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAG 332 EI+ ++E +L + ++ + I + A + + + R+G+ Sbjct: 386 RAAEIVGYSVEEMLLTTIETIIHPDHLQMIIERKAKTDAGEFVPKQFEIMLAHRNGSCVP 445 Query: 333 ILQIKTSSGAETSAF-IERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLH 391 + + + + V DI+ +++K+ I+QL +D +TGLPNR+ L Sbjct: 446 VEVTTARTIWQGKQVELAIVRDIT--------DRKKAEDEIQQLAYYDTLTGLPNRSLLQ 497 Query: 392 NYLDDLVDKA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYL 447 + L + +A + + +D + + D+LG+ D L V R E ++ + Sbjct: 498 DRLGQGIVQAVRDNRKVAIMFLDLDRFKSINDTLGHVAGDSLLATVAERLTECVRETDTV 557 Query: 448 CRIEGTQFVLV-SLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKN 504 RI G +FV++ S ++ +IA+++ +SKP++++D+ +T SIGI+ + G + Sbjct: 558 ARIGGDEFVIIISAIEHAEDLNKIAEKILAAISKPLVLNDQEIFITASIGIAIYPEDGTD 617 Query: 505 RDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQ 564 LL A AM + G N +Q+FS MN E L+L +L+ A+ N+ + YQPQ Sbjct: 618 VQGLLKNADLAMYKAKDQGKNAFQYFSREMNVQALEHLILENSLRRALERNEFVIFYQPQ 677 Query: 565 IFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRS 624 + ++G L G+EAL RW P G +PPSRFIP+AEE G I IG W + AC + W Sbjct: 678 MDLKSGRLVGMEALIRWQHPDLGLLPPSRFIPMAEETGLILPIGEWALQTACAKNRAWMD 737 Query: 625 QNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRI 684 ++VNL + FR + + + G+ QL +E+TESM+M E + Sbjct: 738 AGFMPLRVAVNLCGIQFRQKKFIELIEAVLKKTGLAPSQLELELTESMLMSKAEESTTVL 797 Query: 685 QILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIG 744 L++MGV L++DDFGTG+S LS L + P+ +KID+SF+ A++ AI ++ Sbjct: 798 HKLKEMGVSLAIDDFGTGYSSLSYLKNFPINRVKIDRSFIRDVPNNPDDTAIVSAIIAMA 857 Query: 745 QSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 +LNL V AEGVE Q E L +C IQGY S PLP E ++ Sbjct: 858 HNLNLKVTAEGVENHSQLEFLSTRNCNEIQGYLLSSPLPEAEFTRFLR 905 Score = 74.7 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 67/171 (39%), Gaps = 9/171 (5%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 +A ++ F + G +I ++ + + N A ++ GY EE++ I+ +I D Sbjct: 351 NALRESESNFRALADNANDGLQIITDSSHLAYVNKRAAEIVGYSVEEMLLTTIETIIHPD 410 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRD 124 I + E+ L ++GS + ++ +GK LA+VRD Sbjct: 411 HLQMI---IERKAKTDAGEFVPKQFEIMLAHRNGSCVPVEVTTARTIWQGKQVELAIVRD 467 Query: 125 ASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPER----HIVQCNRAFTEMF 169 + +++ +QL + L ++ D V+ NR MF Sbjct: 468 ITDRKKAEDEIQQLAYYDTLTGLPNRSLLQDRLGQGIVQAVRDNRKVAIMF 518 Score = 61.6 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 49/134 (36%), Gaps = 2/134 (1%) Query: 128 EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI 187 + A +E D+ + + ++ H+ N+ E+ GY + E +T+++ Sbjct: 350 QNALRESESNFRALADNANDGLQIITDSSHLAYVNKRAAEIVGYSVEEMLLTTIETIIHP 409 Query: 188 PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSD 247 + + + Q E +L R G + ++ + + + Q + D Sbjct: 410 DHLQMIIERKAKTDAGEFVPKQFEIMLAHRNGSCVPVEVTTA--RTIWQGKQVELAIVRD 467 Query: 248 ITEERQIRQLEGNI 261 IT+ ++ + Sbjct: 468 ITDRKKAEDEIQQL 481 >UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q087W4_SHEFN Length = 1144 Score = 757 bits (1956), Expect = 0.0, Method: Composition-based stats. Identities = 177/813 (21%), Positives = 364/813 (44%), Gaps = 44/813 (5%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP 67 ++ + + G V+++ + +++ N + + GY +E+ I + + Sbjct: 330 RRSESTYRNIISTAQDGFVIVSVDGKIIESNQSFADMTGYTLDELFNKPIGDIETSENHQ 389 Query: 68 AHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASV 127 + I ++ V+ + Q + K G +S + +++ + +D S Sbjct: 390 FSTQNIITAKQ-----VKAIHYTSQHKHKLGYLFHVEVNISFWDGDDGMFFCFI-KDISQ 443 Query: 128 EMAQKEQT----RQLIIAVDHLDR-PVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPD 182 + +++ + +++ V D R ++ N+A +++GY +A G + + Sbjct: 444 RINAEQKLLLSESKFRHIFENIPSISVQGYDKNRSVIFWNQASEKLYGYTKEQALGKKLE 503 Query: 183 TLLNIPEFPADNRIRLQQLL-WKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNL 241 L+ P + + + +E LL G + + +S + + + + Sbjct: 504 DLIIPPPYREHVINNVNAWINEGVPILAEELLLQRADGSNVAVYSSHTLINNTDNEAEMY 563 Query: 242 VMTFSDITEERQIRQLEGNILAAMCSSPP------FHEMGEIICRNIESVLNESHVSLFA 295 + D++ +++ + + A+ SP E + E + + + Sbjct: 564 CIDI-DLSAQKKAEEQALTLSQAIEQSPISMILTNIDSKIEYVNSAFEKISGYAASEVIG 622 Query: 296 -----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGI---LQIKTSSGAETS 345 L++G+ I +W + R+++G + + T Sbjct: 623 QSASMLKSGLTPKSLYKQLWDAISTGHAWQGELQNRKKNGDIFWEHAHIAPIFDNAGVTK 682 Query: 346 AFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS-- 403 ++ D++Q+ ++ + I +D +TGLPNR + L ++ A Sbjct: 683 HYLALKQDVTQY--------KQQEEKILHQAHYDSLTGLPNRLLSLDRLSQMLKDAHRAK 734 Query: 404 --PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVS-L 460 V + +D + V D++G++ D+ L++ R + ++ + R+ G +F+++ Sbjct: 735 NNVAVLFLDLDDFKKVNDTMGHSVGDELLIQAAVRLKNTIRESDVVGRLGGDEFIIILSN 794 Query: 461 ENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDY 518 N+ + IA +L +P ++++ T+SIGI+ ++ LL A +AM + Sbjct: 795 INEPIEVEIIASKLLEQFYQPFRLENRELVSTISIGIALYPLDSEDPKELLRQADSAMYH 854 Query: 519 IRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEAL 578 + G N + F++ MN + RL + L+ A+ + ++ +QP + ++ ++ G EAL Sbjct: 855 SKDRGRNTYNFYTHQMNHDMDRRLKIEEQLRSALKQKEFEVYFQPFVDIKSRKIIGAEAL 914 Query: 579 ARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSA 638 RW++ L G V P FIP+AE+ G I +IG++VI A +W+ +++N+S Sbjct: 915 LRWNNALLGQVTPDEFIPIAEQTGLIVSIGQYVIEVAFATAKKWQQTYNPYFKIAINVSP 974 Query: 639 LHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDD 698 FR N + ++ + I + +EITE +++ D I + + D+GV +S+DD Sbjct: 975 KQFRENTFVDMLNIQLDKHQIHASTIELEITEGVLLSSDAVIDSNLISINDIGVSISMDD 1034 Query: 699 FGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVET 758 FGTG+S LS L S P +K+DKSF++ + L L+ A ++G LNLTVVAEGVET Sbjct: 1035 FGTGYSSLSYLRSYPFNTLKVDKSFINDITVDPGDLELVGAAIAMGHGLNLTVVAEGVET 1094 Query: 759 KEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 +EQ+ +L + C QGY FS+PLP + Sbjct: 1095 EEQYHLLNALKCDYGQGYLFSKPLPQAAFEALL 1127 Score = 79.3 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 53/424 (12%), Positives = 126/424 (29%), Gaps = 62/424 (14%) Query: 11 DGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHP 70 + ++ + + + N A + E++ L R Sbjct: 207 KNLLQSIIDGIPDIIFYKSADGVYLGCNKAFSEALKLNPEDIKHKTDYDLF---DRQQAD 263 Query: 71 EYIRHNREGGKARVEGMSRELQLEKKDG-SKIWTRFALSKVSAEGKVY-YLALVRDASVE 128 +I+ +R + M E + DG + I+ V + G + + + RD + Sbjct: 264 SFIKADRFVLQENQPWMDEEW-ITTPDGIAHIFKTHKTPFVDSSGDIQGIVGVSRDMADR 322 Query: 129 MAQKEQTRQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 +EQ R+ + +++ + I++ N++F +M GY + E + Sbjct: 323 KLIEEQLRRSESTYRNIISTAQDGFVIVSVDGKIIESNQSFADMTGYTLDELFNKPIGDI 382 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFL--LLTRTGEKIWIKASISPVYDVLAHLQNLV 242 E +++ Q ++ + + G ++ +IS + Sbjct: 383 ----ETSENHQFSTQNIITAKQVKAIHYTSQHKHKLGYLFHVEVNISFWDGDDGMFFCFI 438 Query: 243 MTFSD-ITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNI-------ESVLNESHVSLF 294 S I E+++ E + P G R++ E + + Sbjct: 439 KDISQRINAEQKLLLSESKFRHIFENIPSISVQGYDKNRSVIFWNQASEKLYGYTKEQAL 498 Query: 295 ALR-NGMPIHWASSSHGAEIQNAQSWSAT----------IRQRDGAPAGILQIKTSSGAE 343 + + I H I N +W +++ DG+ + T Sbjct: 499 GKKLEDLIIPPPYREH--VINNVNAWINEGVPILAEELLLQRADGSNVAVYSSHTLINNT 556 Query: 344 TSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS 403 + DI Q+K+ + +T L ++++ Sbjct: 557 DNEAEMYCIDI------DLSAQKKAEEQ--------ALT-----------LSQAIEQSPI 591 Query: 404 PVVY 407 ++ Sbjct: 592 SMIL 595 Score = 67.8 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 42/269 (15%), Positives = 93/269 (34%), Gaps = 36/269 (13%) Query: 131 QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEF 190 + + L +D + + + + CN+AF SEA + P+ + + ++ Sbjct: 203 LETEKNLLQSIIDGIPDIIFYKSADGVYLGCNKAF--------SEALKLNPEDIKHKTDY 254 Query: 191 PADNRIRLQQ-------LLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVM 243 +R + +L + DE + T G K +P D +Q +V Sbjct: 255 DLFDRQQADSFIKADRFVLQENQPWMDEEWITTPDGIAHIFKTHKTPFVDSSGDIQGIVG 314 Query: 244 TFSDITEER----QIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRN- 298 D+ + + Q+R+ E + ++ + + + IES + + ++ + L Sbjct: 315 VSRDMADRKLIEEQLRRSESTYRNIISTAQDGFVIVSVDGKIIESNQSFADMTGYTLDEL 374 Query: 299 -GMPIHWASSSHGAEIQNAQ----------SWSATIRQRDGAPAGILQIKTSSGAETSAF 347 PI +S + +++ + + G + + + F Sbjct: 375 FNKPIGDIETSENHQFSTQNIITAKQVKAIHYTSQHKHKLGYLFHVEVNISFWDGDDGMF 434 Query: 348 IERVADISQHMAALALEQE--KSRQHIEQ 374 + DISQ + A EQ+ S Sbjct: 435 FCFIKDISQRINA---EQKLLLSESKFRH 460 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 757 bits (1956), Expect = 0.0, Method: Composition-based stats. Identities = 174/684 (25%), Positives = 318/684 (46%), Gaps = 39/684 (5%) Query: 137 QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRI 196 Q +++ + + V+ + I+ NR + E GY ++ + + LL+ +F D + Sbjct: 2 QYADLLENSNDLIQVVGFDGRIIYANRMWQETLGYGKNDLTQLNFFDLLHA-DFHCDCQD 60 Query: 197 RLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQ 256 R+Q+L+ + E TR G KI + SIS +Y + F DIT ++ + Sbjct: 61 RIQRLMSGETVPRFEVEYKTRYGHKIIAEGSIS-LYKENGEPCGIQGFFRDITARKKTEK 119 Query: 257 L------------EGNILAAMCSSPPFHEMG------EIICRNIESVLNESHVSLFALRN 298 E ++ +P H + + N E +L + + Sbjct: 120 ALQTSEERFRTIYESSVAGIAMLAPDGHFLQANSAFCNFLGYNEEELLQMKITDVTHPDD 179 Query: 299 GMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGI---LQIKTSSGAETSAFIERVADIS 355 + A ++ ++DG+ + + + DI+ Sbjct: 180 IEDTLSRRNIARANRLHSIVCEKRYIRKDGSVFWAQLSSTWFFDANGNPLYTVPVIQDIT 239 Query: 356 QHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGV 411 + ++++ + I +L +D +TGL NR ++ LD ++ ++ + + + Sbjct: 240 R--------RKEAEERIRELAYYDSLTGLANRTLFNDRLDQVMARSRRRQSRFALMFLDL 291 Query: 412 DHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQI 470 D + V D+LG+A D L + R E L+ + + R+ G +FV++ + + +N+ ++ Sbjct: 292 DRFKGVNDTLGHAVGDAMLRQAAERLNECLRENDTVARLGGDEFVIILSDYKEDANLPRV 351 Query: 471 ADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQ 528 AD++ +S P + + + S+GI+ D G LL A AM +++GG+ ++ Sbjct: 352 ADKILKALSSPFDLGVREVYSSTSVGIAIYPDDGDEATDLLRHADMAMYAAKESGGDTFR 411 Query: 529 FFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGH 588 F+S MN R+ + A L+ A+ + + YQPQI T ++ G+EAL RW P G Sbjct: 412 FYSSEMNARAVSRMDMEANLRRALEQEEFFIEYQPQIDLITNKVAGVEALLRWQHPQLGV 471 Query: 589 VPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPN 648 +PP++FI LAEE I +G WV+ Q W+ + + +N+S F + Sbjct: 472 IPPTQFIGLAEETNLILPLGEWVMRRVFEQCVMWKQEGYLPFRVGINVSGRQFVQPDFVD 531 Query: 649 QVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSR 708 V + G L EITES++M+ ++ L+ +G+ +++DDFGTG+S LS Sbjct: 532 MVCRLLDETGAAPELLEFEITESVVMKDVDAAVLTLEALKKLGINMAIDDFGTGYSSLSC 591 Query: 709 LVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKI 768 L LP+ +KIDKSF+ A++EA ++ + L L V AEGVET+ Q+ ++K Sbjct: 592 LKHLPLNRLKIDKSFISDLQDNADDRAIVEATIAMAKRLELGVTAEGVETEGQYGFVQKR 651 Query: 769 HCRVIQGYFFSRPLPAEEIP-GWM 791 C +QG++FSRPL E+ W+ Sbjct: 652 ECDEVQGFYFSRPLSPSEVADAWL 675 Score = 118 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 96/281 (34%), Gaps = 14/281 (4%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 + LE + ++ + +++ N ++ GY + ++ N L+ D + I Sbjct: 3 YADLLENSNDLIQVVGFDGRIIYANRMWQETLGYGKNDLTQLNFFDLLHADFHCDCQDRI 62 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL-ALVRDAS----VE 128 + G E++ + + G KI ++S G+ + RD + E Sbjct: 63 QRLMSGETVP----RFEVEYKTRYGHKIIAEGSISLYKENGEPCGIQGFFRDITARKKTE 118 Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 A + + + + +L P+ H +Q N AF GY E M+ + + Sbjct: 119 KALQTSEERFRTIYESSVAGIAMLAPDGHFLQANSAFCNFLGYNEEELLQMKITDVTHPD 178 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 + R + E + + G W + S + +D + V DI Sbjct: 179 DIEDTLSRRNIARANRLHSIVCEKRYIRKDGSVFWAQLSSTWFFDANGNPLYTVPVIQDI 238 Query: 249 TEERQIRQLEGNI-----LAAMCSSPPFHEMGEIICRNIES 284 T ++ + + L + + F++ + + Sbjct: 239 TRRKEAEERIRELAYYDSLTGLANRTLFNDRLDQVMARSRR 279 Score = 68.5 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 54/140 (38%), Gaps = 5/140 (3%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 K A ++ F E ++ G ++ + + N A GY EE++ I + Sbjct: 116 KTEKALQTSEERFRTIYESSVAGIAMLAPDGHFLQANSAFCNFLGYNEEELLQMKITDVT 175 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALS-KVSAEGKVYYLA 120 D + + R+ + E + +KDGS W + + + A G Y Sbjct: 176 HPDDIE---DTLSRRNIARANRLHSIVCEKRYIRKDGSVFWAQLSSTWFFDANGNPLYTV 232 Query: 121 -LVRDASVEMAQKEQTRQLI 139 +++D + +E+ R+L Sbjct: 233 PVIQDITRRKEAEERIRELA 252 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 757 bits (1956), Expect = 0.0, Method: Composition-based stats. Identities = 182/672 (27%), Positives = 306/672 (45%), Gaps = 38/672 (5%) Query: 151 VLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQD 210 + D + I++ N F + Y SE G +LN P + + + Sbjct: 47 ITDHKGIILRANEQFCRISKYERSELIG-NDHRILNSGYHPKSFFKEMWSCIRSGQVWRG 105 Query: 211 EFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQL----EGNILAAMC 266 E + G W+ +I P + + + SDIT +Q+ E Sbjct: 106 EIRNCAKDGSYYWVDTTIVPFKNQAGEIYQYLSIRSDITARKQMEDELKRSEEKYRIIAE 165 Query: 267 SSPPFHEMGEIIC----------RNIESVLNESHV-SLFALRNGMPIHWASSSHGAEIQN 315 ++ + + R E + + + +LF + + Sbjct: 166 NTSDIISIINLDGEFLYLSPSHKRVWEHTVPDEEIHNLFEWIVEDDRDIFAYAIQHAFST 225 Query: 316 AQSWSATIR---QRDGAPAGILQIK--TSSGAETSAFIERVADISQHMAALALEQEKSRQ 370 + + R QR+ +I + + D++ ++++S + Sbjct: 226 RKEYMVECRINTQRNDVIWTESKINPIMDEEGNVTKLLLITRDVT--------DRKQSEE 277 Query: 371 HIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWA 426 I L D +T LPNR L + +A V + +D +DV DS G+ Sbjct: 278 TIHHLAYHDALTDLPNRRMYVQQLSKEMMQAKRFQSSLAVLFLDLDRFKDVNDSFGHDVG 337 Query: 427 DQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN-DVSNITQIADELRNVVSKPIMID 485 D L+E R + LKP + R+ G +F ++ + D + T++A+++ + +P +D Sbjct: 338 DMLLIEASKRLQACLKPGDVVARLGGDEFTIMQNQLLDRNEATELAEQIMYQLQRPFELD 397 Query: 486 DKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLV 543 F ++ SIGI+ G N + LL A A+ ++ G NG+ FF P+M ER++ Sbjct: 398 GHVFNVSCSIGIALYPQDGDNPEDLLKRADTALYTVKSRGKNGYDFFDPSMEAKSLERIL 457 Query: 544 LGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGE 603 + +++AI Q ++ YQP+I T + G+EAL RW P G +PP+RFIP+AEE G Sbjct: 458 MENEMRKAIEQEQFQIYYQPKIDIATSAMTGMEALVRWVHPELGIIPPNRFIPIAEETGM 517 Query: 604 IENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQ 663 I +G W++ +AC+Q W Q +SVNLSA L + D + + H Sbjct: 518 ILALGEWILKQACKQNKNWHDQGYT-LKVSVNLSARQIYQKDLVEMIKDILQETKLSPHW 576 Query: 664 LTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSF 723 L +EITES+ ++ E +Q +RD+G+ +S+DDFGTG+S S + SLPV IKID SF Sbjct: 577 LELEITESIFVK-MEEATAVLQQIRDIGIQISIDDFGTGYSSFSYIKSLPVDTIKIDASF 635 Query: 724 VDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLP 783 + + A+++AI +I QSLN+ V+AEG+E +Q L++ C QGY FS+PLP Sbjct: 636 IRDIHHNQESQAIVKAIVTIAQSLNMNVIAEGIELHDQVAALKENGCDHGQGYLFSKPLP 695 Query: 784 AEEIPGWMSSVL 795 ++ + L Sbjct: 696 TDDFDQLLRQEL 707 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 100/252 (39%), Gaps = 12/252 (4%) Query: 16 PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRH 75 AL+Q+ + + ++ N ++ Y+R E+IGN+ +L HP+ Sbjct: 37 YALDQS-TILAITDHKGIILRANEQFCRISKYERSELIGNDHRILNSG----YHPKSFFK 91 Query: 76 NREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAE-GKVY-YLALVRDASVEMAQKE 133 + E++ KDGS W + + G++Y YL++ D + ++ Sbjct: 92 EMWSCIRSGQVWRGEIRNCAKDGSYYWVDTTIVPFKNQAGEIYQYLSIRSDITARKQMED 151 Query: 134 QTRQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE 189 + ++ I ++ + +++ + + + + ++ + + + + + Sbjct: 152 ELKRSEEKYRIIAENTSDIISIINLDGEFLYLSPSHKRVWEHTVPDEEIHNLFEWIVEDD 211 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 +Q E + T+ + IW ++ I+P+ D ++ L++ D+T Sbjct: 212 RDI-FAYAIQHAFSTRKEYMVECRINTQRNDVIWTESKINPIMDEEGNVTKLLLITRDVT 270 Query: 250 EERQIRQLEGNI 261 + +Q + ++ Sbjct: 271 DRKQSEETIHHL 282 Score = 48.1 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 54/141 (38%), Gaps = 8/141 (5%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYK-REEVIGNNIDML 60 ++ D ++ + E +IN + E ++ +P+ +++W + +E I +N+ Sbjct: 148 QMEDELKRSEEKYRIIAENTSDIISIINLDGEFLYLSPSHKRVWEHTVPDEEI-HNLFEW 206 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYY 118 I D R I+H K + E ++ + IWT ++ + Sbjct: 207 IVEDDRDIFAYAIQHAFSTRKEYM----VECRINTQRNDVIWTESKINPIMDEEGNVTKL 262 Query: 119 LALVRDASVEMAQKEQTRQLI 139 L + RD + +E L Sbjct: 263 LLITRDVTDRKQSEETIHHLA 283 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 757 bits (1956), Expect = 0.0, Method: Composition-based stats. Identities = 187/688 (27%), Positives = 319/688 (46%), Gaps = 37/688 (5%) Query: 134 QTRQLIIAVDHLDRPVIVLDPE----RHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE 189 +++ V+ + L P H + ++ GY E L +I Sbjct: 652 ANKRINQIVNLSPAVIYTLKPNAEGIFHSDFISENIYQITGYAKDEWL-KDNFWLDHIHT 710 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 + +++L++T ++ + G IWI+ ++ D +V + DIT Sbjct: 711 EDLAAALDSKKILFETGSLNHQYRFMHANGGYIWIEDQLTLTRDNNGKPLEIVGAWLDIT 770 Query: 250 EE---RQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWAS 306 + + +L + + + I + + + P AS Sbjct: 771 DRLSAEEKLRLNAKVFESSRDGIVITDKNNKIISVNNAFTTITGYEAKEVVGKNPHMLAS 830 Query: 307 SSHGAEIQNA--------QSWSATI--RQRDGA----PAGILQIKTSSGAETSAFIERVA 352 +A W + ++++G I IK + G S I ++ Sbjct: 831 EKLEESFYSAMWDSIGVMGYWQGEVINQRKNGEIYTQWLSISTIKDADGK-ISQHIGIIS 889 Query: 353 DISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYL 408 DIS E++ + + I+ L FDP+T LPN+N L++ + A + Sbjct: 890 DIS--------ERKVAEERIQFLSNFDPLTNLPNKNLLNDRTKLALATAKRLKTAVTLMF 941 Query: 409 IGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNIT 468 + +D + + +SLG + DQ + E+ RF ++P+ +CR G +F+L+ D Sbjct: 942 VDLDRFKFINESLGPSIGDQVVKELAERFVAYMRPEDTVCRQGGDEFILLLPNTDAEGAA 1001 Query: 469 QIADELRNVVSKPIMIDDKPFPLTLSIGIS--YDLGKNRDYLLSTAHNAMDYIRKNGGNG 526 +A +L ++V++P + LT SIGIS G++ + L +A A+ + G N Sbjct: 1002 HVAKKLLDIVAQPFNFHGQKIVLTASIGISAYPQDGESFEQLAQSADAALYRAKYEGRNN 1061 Query: 527 WQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLH 586 +QFF+ M+E + L+L + L+ AI + + L YQPQ ++T ++ G+EAL RW P Sbjct: 1062 FQFFARQMHEQAHDILLLESELRSAIEHEEFLLYYQPQYDSKTSKIIGLEALIRWQHPEK 1121 Query: 587 GHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQL 646 G V P+ FIP+AEE G I IG WV+ A +QLA W+ + ++VNLS + F + L Sbjct: 1122 GLVSPAVFIPIAEESGLIAEIGDWVLRTAVKQLASWQEAGLGAVPVAVNLSVVQFHQDTL 1181 Query: 647 PNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGL 706 V + +D L +E+TE + ME + L +GV LS+DDFGTG+S L Sbjct: 1182 YGSVCQILRDTKVDPSMLELELTEGIAMEDSERTLNVLNQLNSLGVRLSIDDFGTGYSSL 1241 Query: 707 SRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLR 766 S L + ++KID+SFV + + A++ AI S+ +SL+ +AEGVET EQ L Sbjct: 1242 SYLKKFKIDKLKIDQSFVRGIGSHPQDAAIITAIISMAKSLSFKTIAEGVETLEQLNFLI 1301 Query: 767 KIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 C IQGY+FS+PLP+ E+ +++ Sbjct: 1302 ANSCDEIQGYYFSKPLPSTEVTKLLANQ 1329 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 87/250 (34%), Gaps = 17/250 (6%) Query: 16 PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRH 75 L+ N G + F + ++ GY ++E + +N L H E + Sbjct: 668 YTLKPNAEGIFHSD------FISENIYQITGYAKDEWLKDNF------WLDHIHTEDLAA 715 Query: 76 NREGGKARVEGMS--RELQLEKKDGSKIWTR--FALSKVSAEGKVYYLALVRDASVEMAQ 131 + K E S + + +G IW L++ + + + D + ++ Sbjct: 716 ALDSKKILFETGSLNHQYRFMHANGGYIWIEDQLTLTRDNNGKPLEIVGAWLDITDRLSA 775 Query: 132 KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFP 191 +E+ R + +++ D I+ N AFT + GY E G P L + Sbjct: 776 EEKLRLNAKVFESSRDGIVITDKNNKIISVNNAFTTITGYEAKEVVGKNPHML-ASEKLE 834 Query: 192 ADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEE 251 + + Q E + + GE SIS + D + + SDI+E Sbjct: 835 ESFYSAMWDSIGVMGYWQGEVINQRKNGEIYTQWLSISTIKDADGKISQHIGIISDISER 894 Query: 252 RQIRQLEGNI 261 + + + Sbjct: 895 KVAEERIQFL 904 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 65/145 (44%), Gaps = 8/145 (5%) Query: 1 MKLTDADNAADGIFFPA--LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNID 58 + +TD +A + + A E + G V+ ++N++++ N A + GY+ +EV+G N Sbjct: 767 LDITDRLSAEEKLRLNAKVFESSRDGIVITDKNNKIISVNNAFTTITGYEAKEVVGKNPH 826 Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKV- 116 ML L E + E+ ++K+G ++S + A+GK+ Sbjct: 827 MLASEKLE----ESFYSAMWDSIGVMGYWQGEVINQRKNGEIYTQWLSISTIKDADGKIS 882 Query: 117 YYLALVRDASVEMAQKEQTRQLIIA 141 ++ ++ D S +E+ + L Sbjct: 883 QHIGIISDISERKVAEERIQFLSNF 907 Score = 67.8 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 67/156 (42%), Gaps = 12/156 (7%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 L + A+ + +Q G ++++ + + N AA + GY++ E++G + ++ Sbjct: 344 LLSSRQLAESRYQKLFDQASDGVLVLDHQHQFIAANLAATNMLGYQQGELLGMRLPDVLI 403 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALV 122 ++ HPE+ + + E Q +KDGS+ K+ YY ++ Sbjct: 404 NNVTK-HPEFNTNLISDIPTK-----DEWQYRRKDGSRFIAEVNCRKLDKN---YYFTII 454 Query: 123 RDASVEMAQKEQ---TRQLIIAVDHLDRPVIVLDPE 155 RD + + + QL A+ +++ ++ + + Sbjct: 455 RDLTERKLAENRILHLTQLYQALSEVNQAIVRMGDD 490 Score = 66.2 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 60/194 (30%), Gaps = 18/194 (9%) Query: 131 QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEF 190 ++ + D V+VLD + + N A T M GY E GM+ +L Sbjct: 348 RQLAESRYQKLFDQASDGVLVLDHQHQFIAANLAATNMLGYQQGELLGMRLPDVLINN-- 405 Query: 191 PADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITE 250 L +DE+ + G + + + + D+TE Sbjct: 406 -VTKHPEFNTNLISDIPTKDEWQYRRKDGSRFIAEVNCRKL-----DKNYYFTIIRDLTE 459 Query: 251 ERQIRQLEGNIL----------AAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGM 300 + ++ A+ HE+ ++CR+ + + L Sbjct: 460 RKLAENRILHLTQLYQALSEVNQAIVRMGDDHELFPVVCRSSVNFGGMKMAWVGQLDEES 519 Query: 301 PIHWASSSHGAEIQ 314 + + HG I+ Sbjct: 520 QQIFPVAVHGDGIE 533 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 757 bits (1956), Expect = 0.0, Method: Composition-based stats. Identities = 185/693 (26%), Positives = 306/693 (44%), Gaps = 41/693 (5%) Query: 134 QTRQLIIAVDHLDRPVIVL--DPERHIVQCNRAFTEMFGYCISEAS--GMQPDTLLNIPE 189 Q R L + +L+ V D + + + GY + + P+ Sbjct: 15 QARLLSTLLANLEGMVYRCRLDAHWTMEFVSEGCFALTGYTEEDLLFNSRVSYDQITHPD 74 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 R + + + R E+ ++ G + + + L D+T Sbjct: 75 DRRHVRDTILEAVRNNRRFDIEYRIVRADGSIRHVWERGTNISHDNKAWDILEGFIQDVT 134 Query: 250 EERQ-----------IRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFA-LR 297 E +Q R + N + + S P + +S +L + LR Sbjct: 135 ERKQADEALREAERRYRSIFENAIEGIYQSTPSDGYLAVNPALARMYGYDSPQALISTLR 194 Query: 298 NGMPIHWASSSHGAEIQNAQS-------WSATIRQRDGAPAGILQI---KTSSGAETSAF 347 + + E + + + + + +R+G I + +S F Sbjct: 195 DIDNQVYVDPQRRLEFKRLMAKHGVVTNFESRVHRRNGEVIWISENARSVYNSDGTLLFF 254 Query: 348 IERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS---- 403 V I+ E++ I+ D +TGLPNR L++ + V + Sbjct: 255 EGTVEAIT--------ERKLHEAEIQFQATHDALTGLPNRTLLYDRMQQAVLHSERYGKL 306 Query: 404 PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEND 463 + + +D + + DSLG+ D+ L R L+ + R G +FVL+ + Sbjct: 307 TAIAFLDLDQFKFINDSLGHQVGDELLKITAQRLTSCLRESDTVARQGGDEFVLLLTDQP 366 Query: 464 VSNI-TQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIR 520 T + + VS+P +D F +T SIG++ D G++ + LL A +AM + Sbjct: 367 NEEAITHTMQRVLHEVSQPWKANDLEFQITCSIGLTLCPDDGRDAETLLKNADSAMYKAK 426 Query: 521 KNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALAR 580 + G N +Q+FS MN V +RL L L++AI+N L YQP++ + ++ G EAL R Sbjct: 427 ELGRNNFQYFSAEMNSSVTDRLELLNRLRQAITNEDFVLHYQPKVSLASHQIIGAEALVR 486 Query: 581 WHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALH 640 W+ G V P+ FIPLAEE G I +G WV+ ACRQ W+ +SVNLS Sbjct: 487 WNSAHSGMVSPASFIPLAEETGLIIPLGEWVLRTACRQNRAWQDAGYPPIPISVNLSPRQ 546 Query: 641 FRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFG 700 + V + G++ L +EITES+M + F + LR +GV +S+DDFG Sbjct: 547 LARGDIVEVVERILTETGLEAQHLELEITESVMTTDVEKSFALLTQLRSLGVKISLDDFG 606 Query: 701 TGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKE 760 TG+S LS L PV +KID+SFV T++ A+++AI S+G++LNLTV+AEG+ET++ Sbjct: 607 TGYSSLSYLKRFPVDTLKIDQSFVRDIATDQDSAAIVKAIISLGRNLNLTVLAEGIETED 666 Query: 761 QFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 QF+ L C QGY S+P+P + ++ Sbjct: 667 QFQFLLANGCDEGQGYLMSKPVPNKNFVDLLTQ 699 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 53/308 (17%), Positives = 104/308 (33%), Gaps = 16/308 (5%) Query: 6 ADNAADGIFFPALEQNMMGAVL---INENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 AD L N+ G V ++ + + F + L GY E+++ N + Sbjct: 10 ADPTLQARLLSTLLANLEGMVYRCRLDAHWTMEFVSEGCFALTGYTEEDLL-FNSRVSYD 68 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL--A 120 + P ++R E ++ + DGS + +S + K + + Sbjct: 69 QITHPDDRRHVRDTILEAVRNNRRFDIEYRIVRADGSIRHVWERGTNISHDNKAWDILEG 128 Query: 121 LVRDASVEM----AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 ++D + A +E R+ ++ + P + N A M+GY +A Sbjct: 129 FIQDVTERKQADEALREAERRYRSIFENAIEGIYQSTPSDGYLAVNPALARMYGYDSPQA 188 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTARD-QDEFLLLTRTGEKIWIKASISPVYDVL 235 + N R+ ++L+ K E + R GE IWI + VY+ Sbjct: 189 LISTLRDIDNQVYVDPQRRLEFKRLMAKHGVVTNFESRVHRRNGEVIWISENARSVYNSD 248 Query: 236 AHLQNLVMTFSDITEERQIR-----QLEGNILAAMCSSPPFHEMGEIICRNIESVLNESH 290 L T ITE + Q + L + + ++ + + E + Sbjct: 249 GTLLFFEGTVEAITERKLHEAEIQFQATHDALTGLPNRTLLYDRMQQAVLHSERYGKLTA 308 Query: 291 VSLFALRN 298 ++ L Sbjct: 309 IAFLDLDQ 316 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 84/231 (36%), Gaps = 16/231 (6%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 +A A+ + E + G +D + NPA +++GY + + + + + + Sbjct: 141 EALREAERRYRSIFENAIEGIYQSTPSDGYLAVNPALARMYGYDSPQALISTLRDIDNQV 200 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKVYYLALVR 123 P+ + + E ++ +++G IW V +++G + + Sbjct: 201 Y--VDPQRRLEFKRLMAKHGVVTNFESRVHRRNGEVIWISENARSVYNSDGTLLFFEGTV 258 Query: 124 DASVEMAQKEQTRQLII---AVDHLDRPVIVLDPERHIVQCNRAFTEMFGYC-------- 172 +A E E Q A+ L ++ D + V + + ++ Sbjct: 259 EAITERKLHEAEIQFQATHDALTGLPNRTLLYDRMQQAVLHSERYGKLTAIAFLDLDQFK 318 Query: 173 -ISEASGMQP-DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEK 221 I+++ G Q D LL I + +R + + D+ LL + E+ Sbjct: 319 FINDSLGHQVGDELLKITAQRLTSCLRESDTVARQGGDEFVLLLTDQPNEE 369 >UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=C7LQR9_DESBD Length = 1262 Score = 757 bits (1955), Expect = 0.0, Method: Composition-based stats. Identities = 207/827 (25%), Positives = 349/827 (42%), Gaps = 50/827 (6%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 L DA + + I A + V + ++ NP A ++G+ + G I L+P Sbjct: 444 LHDAVSKTEAIVKSAADAI---IVFTTDTLRIISANPGASFIFGHPALRLEGMTIPELLP 500 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALV 122 P + ++ E+ + +GS++ +++ S +++ Sbjct: 501 AWGIPGSGDNEASLLHAMRSS---NQVEVTGRRANGSQVTLEAVITQSSGRQGDFFIGTF 557 Query: 123 RDASVEM----AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 RD S ++ ++ + P +Q N A +++G+ Sbjct: 558 RDISERKRYENELRKAEENFRGIFENAVEGMFRTTPHGRYLQANPALAKIYGFESPAELM 617 Query: 179 MQPDTLLNIPEFPADNRIRLQQLL-WKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 D + A R +LL K E + + G IWI + V D + Sbjct: 618 RHYDDISRQLYVEAGRREEFIRLLGEKEEIFDFESAIRRKDGSVIWISENARAVKDAAGN 677 Query: 238 LQNLVMTFSDITEERQIRQLEGNILAAMCS----SPPFHEMGEIICR------NIESVLN 287 + T DIT+ R ++Q +A SP + + + R E++ Sbjct: 678 VVCYEGTVMDITQRRAMQQALDRQMALFGQLFEDSPLAIALVDTVGRIAQVNGGFETLFG 737 Query: 288 ESHVSLFALRNGMPIHWAS-----SSHGAEIQNAQSWSATIRQR----DGAPAGILQIKT 338 + N + I +S I + ++ +R D P +L Sbjct: 738 YKRAEILGKDNRLFIVPEEQLSEINSIRQRILDGETVQRETLRRTSRGDIVPVNLLGHPV 797 Query: 339 SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV 398 G E + DIS E+++ + I D +TGLPNR+ L V Sbjct: 798 RIGGEITNIFWIYQDIS--------ERKEFERQITHQAFHDSLTGLPNRSLFRERLGRAV 849 Query: 399 DKAVS-----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGT 453 ++ LI ++ + V DSLG+ D L+E+ +R + ++ + R+ G Sbjct: 850 ERTKRRPDYHFAAMLIDLNKFKWVNDSLGHQAGDALLVEIASRLKSCVRSVDTVARLGGD 909 Query: 454 QFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLS 510 +F ++ E + +A ++N V + + + K S+GI + +L Sbjct: 910 EFAILLEEFRTNKEVISVASRIQNEVRRAFLWNGKEIVSGASVGIVLQTRDCAGAEDILR 969 Query: 511 TAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETG 570 A AM ++ G F + M + V E + + L+ AI N L+L YQP + G Sbjct: 970 DADIAMYKAKERGRGHLVFHNR-MRQEVLEVINMENELRRAIEGNSLELHYQPIFDVDGG 1028 Query: 571 ELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHI- 629 +L G EAL RW P HG + P RFIPLAEE G I +G+WV+ ACRQL W ++ Sbjct: 1029 KLEGFEALVRWRHPEHGMIMPDRFIPLAEESGLIVPLGQWVVNAACRQLKSWDDESGTAE 1088 Query: 630 --PALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQIL 687 +SVNLS F + L + + A+ I +L +EITES ++ ++++ L Sbjct: 1089 YGLTMSVNLSCKQFAQHTLVDMILRALRENDIAPPRLKLEITESAIILDPAAAAEKLRRL 1148 Query: 688 RDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSL 747 +++GV L+VDDFGTG+S LS L P+ +KID+SF+ T K ++ +I + SL Sbjct: 1149 KEIGVLLAVDDFGTGYSSLSYLRQFPMDILKIDRSFISGTDTPKENAEIVRSIVDMAHSL 1208 Query: 748 NLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 L V AEGVET+EQ E L+ I+C QGY FS+P+ + + Sbjct: 1209 GLRVTAEGVETQEQLERLQSINCDRAQGYMFSKPMAPGDAGDMIRQA 1255 >UniRef50_C8QI00 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Enterobacteriaceae RepID=C8QI00_9ENTR Length = 949 Score = 756 bits (1954), Expect = 0.0, Method: Composition-based stats. Identities = 216/803 (26%), Positives = 357/803 (44%), Gaps = 49/803 (6%) Query: 24 GAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKAR 83 +++ + V +N A++ GY EE++G + R H I G + Sbjct: 148 AIYMLDLDGNVENWNAGAQRAKGYVAEEIVGQHFSRFYSAQDRLNH---IPEKNLGIAFK 204 Query: 84 VEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRDASVE----MAQKEQTRQ 137 E +KDGS W + + + + Y + RD + + AQ+EQ + Sbjct: 205 TGRFEDEGWRYRKDGSAFWAHVIIDAIRDDTGKLIGYAKITRDCTEQQALLRAQREQEKT 264 Query: 138 LIIAVDHLDR-PVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRI 196 + V + + +LD + +V N GY E G E + Sbjct: 265 FRLLVTGVRDYAIYMLDVQGRVVNWNAGAQRAKGYRSEEIVGQHFSVFYGAQERQSKAPD 324 Query: 197 RLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQ 256 + KT R +DE + G W I +++ L D+TE R+ Q Sbjct: 325 ANLGIALKTGRFEDEGWRYRKDGSAFWAHVVIDAIHNEEGRLIGFAKITRDVTERREHEQ 384 Query: 257 LEGNILAAMCSS------------------PPFHEMGEIICRNIESVLNESHVSLFALRN 298 + P + + I R I ++N+ LF + Sbjct: 385 QLLRARDLAEAQSAKASELSKFLDTIITHIPSCVIVEDAITREI-LMVNDKAEQLFGINK 443 Query: 299 GMPIHWASSSH-GAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVA----D 353 + +H AE+ + + A I R Q+ ++G E D Sbjct: 444 LLIMHKRPHECMSAELSDYFNSLADIALRSEGIHTREQLLLTAGGERILHTRATTIAGKD 503 Query: 354 ISQHMAALALE----QEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PV 405 + Q+ L +E Q ++ I + D +T LPNR L + + Sbjct: 504 LRQNFVMLIVEDVTDQREADARIHHMAHHDNLTSLPNRILFRQKLSEALRADTQGGYITA 563 Query: 406 VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL-ENDV 464 + +D+ ++V D+LG+ D L V R R L+ L RI G +F +V + Sbjct: 564 TLCLDLDNFKNVNDALGHQIGDDLLRTVAKRLRNVLRDHDTLARIGGDEFAIVLPNIRNA 623 Query: 465 SNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKN 522 +A L + P+ ++ + LS+GI+ +++L A A+ ++N Sbjct: 624 DEAAVVAQRLIEAIRPPVNLEGHNLSVGLSVGIALSSQAANTPEHMLRCADMALYEAKRN 683 Query: 523 GGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWH 582 G N ++ F+ M+++ + R V+ L++AIS QLKL YQP + G EAL RWH Sbjct: 684 GRNRYEHFTLEMDDLARSRRVIENDLRDAISGRQLKLYYQPITDGNEKGIIGYEALMRWH 743 Query: 583 DPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFR 642 P+ G + P+ FIP+AEE G I +G + + EACR+ A W + ++SVNLS L F+ Sbjct: 744 HPIKGLIMPNDFIPIAEETGLIHLLGAYALYEACREAASWEGE----QSVSVNLSPLQFK 799 Query: 643 SNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTG 702 ++ L + V A+ G+ H+L VEITES++++ + +Q L+ +GV +++DDFGTG Sbjct: 800 NSSLISVVEGALRESGLAPHRLEVEITESVLLDDALGNIRTLQNLKALGVQIALDDFGTG 859 Query: 703 FSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQF 762 +S LS L S P +IKIDKSF++ + LA++ AIT + +SL++ + AEGVE+ EQF Sbjct: 860 YSSLSYLRSFPFDKIKIDKSFINDMGDSREALAIIRAITGMSRSLDIQITAEGVESSEQF 919 Query: 763 EMLRKIHCRVIQGYFFSRPLPAE 785 LR+ C + QGY F RP P+E Sbjct: 920 ARLREEGCTLFQGYLFGRPQPSE 942 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 62/399 (15%), Positives = 136/399 (34%), Gaps = 43/399 (10%) Query: 7 DNAADGIFFPALEQNMM-GAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 DN +D ++ ++ + ++ + V +N A++ GY EE++G N + D Sbjct: 2 DNNSDVMYRLLVQSVLDYAIYMLKPDGTVASWNAGAQRAKGYTAEEIVGKNFALFYSEDD 61 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYYLALVR 123 R R E E +KDGS + + + + + R Sbjct: 62 RKNGAPLRGLANATATGRFET---EGWRYRKDGSAFSAHVIIDAIRDQYGELLGFAKITR 118 Query: 124 DASVEMAQKEQTRQ----LIIAVDH-LDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 D + + Q+ + R+ + V+ D + +LD + ++ N GY E G Sbjct: 119 DCTQQQEQQRRQREQEERFRLLVEGVTDYAIYMLDLDGNVENWNAGAQRAKGYVAEEIVG 178 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 + + + + +KT R +DE + G W I + D L Sbjct: 179 QHFSRFYSAQDRLNHIPEKNLGIAFKTGRFEDEGWRYRKDGSAFWAHVIIDAIRDDTGKL 238 Query: 239 QNLVMTFSDITEERQI---RQLEGNILAAMCSSPPFHEM------GEII----------C 279 D TE++ + ++ + + + + + G ++ Sbjct: 239 IGYAKITRDCTEQQALLRAQREQEKTFRLLVTGVRDYAIYMLDVQGRVVNWNAGAQRAKG 298 Query: 280 RNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNA----QSWSATIRQRDGAPAGILQ 335 E ++ + H S+F ++ G ++ + W ++DG+ Sbjct: 299 YRSEEIVGQ-HFSVFYGAQERQSKAPDANLGIALKTGRFEDEGWRY---RKDGSAFWAHV 354 Query: 336 IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQ 374 + + E I A I++ + E+ + Q + + Sbjct: 355 VIDAIHNEEGRLIG-FAKITRDV----TERREHEQQLLR 388 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 756 bits (1953), Expect = 0.0, Method: Composition-based stats. Identities = 166/473 (35%), Positives = 251/473 (53%), Gaps = 11/473 (2%) Query: 327 DGAPAGILQIKTSSGAETSAFIERVADISQHMAAL---ALEQEKSRQHIEQLIQFDPMTG 383 D +LQ S + + D+ +H A L E+ ++ + I Q+ +D +TG Sbjct: 144 DQVDEQLLQQYAHSASAVLRNFRLMEDLRRHAAMLEEEVAERSRAEERIRQMAYYDSLTG 203 Query: 384 LPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFRE 439 LPNR ++ L + A V + +D + + D+LG+A D+ L+ V R R Sbjct: 204 LPNRRLFNDRLRQSLALAQRHKRPLAVMFLDLDRFKLINDTLGHAVGDRLLMAVAKRLRN 263 Query: 440 KLK-PDQYLCRIEGTQFVL-VSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGI 497 + + R G +F++ +S +DV + +A ++ +V P +ID +T SIGI Sbjct: 264 CCRREGDTVARQGGDEFIINLSAISDVKDAFTVAQKIIDVFRTPFVIDGYELFITTSIGI 323 Query: 498 SYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNN 555 S G++ D L+ A AM ++ G N Q F+P MN ERL L ++ A+ + Sbjct: 324 SVYPHDGRSGDALVKNADVAMYRAKEQGRNNCQLFAPEMNARAFERLSLENDMRRALERD 383 Query: 556 QLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEA 615 + L YQP++ E G++ +EAL RW P G VPPSRFIPLAEE G I +G WV+ A Sbjct: 384 EFVLHYQPKVNVEHGQIACMEALVRWQHPSMGLVPPSRFIPLAEETGLIVPLGEWVLRTA 443 Query: 616 CRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMME 675 C+Q W+ ++VNLS R L V+ + G+ L +E+TES++M+ Sbjct: 444 CQQNRAWQDAGYPTMQVAVNLSPRQLRQGDLSETVARVLAETGLAPGWLVIEVTESILMD 503 Query: 676 HDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILA 735 E + + L MGV +S+DDFGTG+S L L PV +KID+SFV + A Sbjct: 504 DAEETIRTFRRLDRMGVRISIDDFGTGYSSLHYLKKFPVHTLKIDRSFVREIASNPDDEA 563 Query: 736 LLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIP 788 + A+ S+ + LNL VVAEGVET EQ E+LR ++CR +QG+ FS P PAE+ Sbjct: 564 IAGAVISMAKGLNLGVVAEGVETVEQMEVLRALNCRYMQGFLFSEPAPAEQFT 616 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 756 bits (1953), Expect = 0.0, Method: Composition-based stats. Identities = 187/704 (26%), Positives = 309/704 (43%), Gaps = 39/704 (5%) Query: 120 ALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 A+ +++ +E + D I + N A GY + E + Sbjct: 334 AMRLASAMTKELRENEEKFRAIADCTVNWEIWWGTDGKPRWINSAVEAYIGYTVDECMAL 393 Query: 180 QPDT-LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 + P Q+ L D EF + + G +W+ AS P+ D Sbjct: 394 PDFAGTVIYPADIPRVAPEFQKALQGLRGDDLEFRCVRKDGSLMWLSASWVPITDSKGEF 453 Query: 239 QNLVMTFSDITEERQIRQLEGNILAAMC--SSPPFHEMGEIICRNIESVLNESHVSLFAL 296 + DITE +Q+ A + I R + + + + Sbjct: 454 IGFRTSGRDITERKQVEAELRIAAVAFDSMEPMMITDASATILRVNSAFTECTGYTAEEI 513 Query: 297 RNGMPIHWASSSH--------GAEIQNAQSWSATI--RQRDGAPAG---ILQIKTSSGAE 343 P S H EI +A W + R+++G + S Sbjct: 514 VGQTPRVLRSGRHDDAFFQEMWEEIHSAGGWQGEVWDRRKNGEVYPKWLTISAVMSDNGT 573 Query: 344 TSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS 403 S ++ DI+ E++ + + I++L FD +T LPNR L + L + + Sbjct: 574 VSHYVGTHHDIT--------ERKIAEERIKELAFFDALTRLPNRTLLLDRLRQAITASAR 625 Query: 404 ----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVS 459 + I +DH + + D+LG+ D L +V R + + + R+ G +FV+V Sbjct: 626 NEACGALLFIDLDHFKTLNDTLGHDKGDLLLQQVARRLADSVLESDTVARVGGDEFVVVL 685 Query: 460 ------LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGK--NRDYLLST 511 + + + + + V+ P + + + SIG + G + D LL Sbjct: 686 GNLHKNRQEAANQTEAVGERILAVLGSPYHLGKIEYRTSASIGATVFRGHQASIDELLKQ 745 Query: 512 AHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGE 571 A AM ++ G N +FF P M +V +R L A L+ AI +NQ L YQ Q+ T Sbjct: 746 ADLAMYKSKERGRNAVRFFDPDMQTVVVQRAALEAGLRNAIEDNQFLLHYQAQV-VGT-R 803 Query: 572 LYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ-NIHIP 630 + G EAL RW P G VPP+ FIPLAEE G I +G WV+ AC QLA W ++ ++ Sbjct: 804 VTGAEALVRWQHPQRGIVPPAEFIPLAEETGLIVALGSWVLEAACAQLARWAARPDMAHL 863 Query: 631 ALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDM 690 ++VN+S FR + V + G +L +E+TES+++++ +I +++ L+ Sbjct: 864 TIAVNVSVQQFRKADFVDNVLTIIGRTGARPDRLKLELTESVLVDNVQDIIEKMSALKAK 923 Query: 691 GVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLT 750 G+ ++DDFG G+S LS L LP+ ++KID+SFV L + + I ++ +SL L Sbjct: 924 GIVFALDDFGIGYSSLSYLKRLPLDQLKIDRSFVRDVLVDSNDAVIARTIVALARSLGLG 983 Query: 751 VVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 V+AEGVET+ Q + L C QGY+F RPLP E+ +++V Sbjct: 984 VIAEGVETEAQRDFLAAAGCYAYQGYYFCRPLPIEDFEALLNNV 1027 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 53/265 (20%), Positives = 99/265 (37%), Gaps = 14/265 (5%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNN---IDM 59 +T + F + + + + + + N A E GY +E + + Sbjct: 341 MTKELRENEEKFRAIADCTVNWEIWWGTDGKPRWINSAVEAYIGYTVDECMALPDFAGTV 400 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL 119 + P D+ PE+ + + G E + +KDGS +W + ++ + K ++ Sbjct: 401 IYPADIPRVAPEF-----QKALQGLRGDDLEFRCVRKDGSLMWLSASWVPIT-DSKGEFI 454 Query: 120 ALV---RDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 RD + + + R +A D + P+++ D I++ N AFTE GY E Sbjct: 455 GFRTSGRDITERKQVEAELRIAAVAFDSM-EPMMITDASATILRVNSAFTECTGYTAEEI 513 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 G P L + A + + + Q E + GE +IS V Sbjct: 514 VGQTPRVLRSGRHDDAFF-QEMWEEIHSAGGWQGEVWDRRKNGEVYPKWLTISAVMSDNG 572 Query: 237 HLQNLVMTFSDITEERQIRQLEGNI 261 + + V T DITE + + + Sbjct: 573 TVSHYVGTHHDITERKIAEERIKEL 597 Score = 70.8 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 59/168 (35%), Gaps = 11/168 (6%) Query: 9 AADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPA 68 A+ +M ++ + + ++ N A + GY EE++G +L Sbjct: 470 EAELRIAAVAFDSMEPMMITDASATILRVNSAFTECTGYTAEEIVGQTPRVLRSGR---- 525 Query: 69 HPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLALVRDAS 126 H + G E+ +K+G +S V ++ +Y+ D + Sbjct: 526 HDDAFFQEMWEEIHSAGGWQGEVWDRRKNGEVYPKWLTISAVMSDNGTVSHYVGTHHDIT 585 Query: 127 VEMAQKEQTRQLII--AVDHLDRPVIVLDPERHIVQC---NRAFTEMF 169 +E+ ++L A+ L ++LD R + N A + Sbjct: 586 ERKIAEERIKELAFFDALTRLPNRTLLLDRLRQAITASARNEACGALL 633 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 756 bits (1952), Expect = 0.0, Method: Composition-based stats. Identities = 201/746 (26%), Positives = 334/746 (44%), Gaps = 64/746 (8%) Query: 100 KIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPER-HI 158 W L GK +L + D +V + +L + + + Sbjct: 195 WRWAEEVLDSKKTPGKDIFL-ISSDGTVLSGPAKPQSKLADLSPAAMQAISTNQSGGSQL 253 Query: 159 VQCNRAFTEMFGYCIS----EASGMQPDTLLNIPEFPADNRIR-LQQLLWKTARDQD--- 210 V+ N T + G+ S E G+ +L+ A R LQQ +W Sbjct: 254 VKWNDGKTYLVGFSKSSGYREYQGLGWASLVRQDVNTAFAPARQLQQHIWLVGAALGLLF 313 Query: 211 ---EFLLLTRTGEKIWIKASIS------------PVYDVLAHLQNLVMTFSD-------- 247 +L+ R I + + + P + +L D Sbjct: 314 AWLGWLMAGRIARPISLISQAADKVAGGDLEYELPARLGEGEVAHLSTAIHDMVVNLTHE 373 Query: 248 ITEERQIRQL---EGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHW 304 I + ++ Q + + + + + I ++ + + P Sbjct: 374 IKQRKEAEQGLRLSAKVFESNTEAIMITDAEQNIVMVNQAFTQITGYGADEVLGQRPKLL 433 Query: 305 ASSSHGAEIQNA--------QSWSATI--RQRDGAPAG---ILQIKTSSGAETSAFIERV 351 +S HG E A W I ++++G + ++ S ++ Sbjct: 434 SSGRHGPEFYEAFWHALRANDLWRGEIWNKRKNGEIFPEWVTISALRDETSQISHYVAVF 493 Query: 352 ADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVY 407 DI+ E++K + I L +D +TGLPNR L + ++ A V Sbjct: 494 LDIT--------ERKKEEERINYLANYDVLTGLPNRYLLSDRIEQAFSSAQRNNFKVAVL 545 Query: 408 LIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFV-LVSLENDVSN 466 I +D+ +++ DSLG+ D L V R + L+ + R+ G +FV L+S + Sbjct: 546 FIDLDYFKNINDSLGHDIGDALLKLVAARLKTCLRRSDTIARLGGDEFVALLSELDSSEE 605 Query: 467 ITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGG 524 + +A+++ +++ + + +T SIGI D G+ LL A AM + +G Sbjct: 606 VIFVAEKMIESLTEKFTLGEYQLSITPSIGICIYPDDGETSVELLRNADLAMYQAKDDGR 665 Query: 525 NGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDP 584 N ++F+SP MN ERL L L+ AI QL + YQP++ +G++ G+EAL RW P Sbjct: 666 NNFKFYSPDMNRKALERLKLETFLRVAIVQQQLSVYYQPKVSVLSGKMTGMEALLRWQHP 725 Query: 585 LHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSN 644 G + P+ FIP+AEE G I IG WV+ ++C Q W++Q I ++VNLSA + + Sbjct: 726 ELGFISPAVFIPIAEETGLINEIGDWVLRQSCLQARLWQAQGYDIVPIAVNLSARQLKQD 785 Query: 645 QLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFS 704 +V + G+D H L +EITESM+M + ++ LRD GV L++DDFGTG+S Sbjct: 786 NFAARVVTILREAGLDAHYLVLEITESMLMSTGESGLQILEQLRDDGVRLALDDFGTGYS 845 Query: 705 GLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEM 764 LSRL +LP+ +KID+SFV +T+ +++ A + +LNL V AEGVET+EQ + Sbjct: 846 SLSRLKNLPLDSLKIDQSFVRDIVTDPNDASIVSATAVLAHALNLKVTAEGVETQEQLDF 905 Query: 765 LRKIHCRVIQGYFFSRPLPAEEIPGW 790 +R ++C QGY FSRP+PA E+ + Sbjct: 906 IRMLNCEEYQGYLFSRPIPASEVVKY 931 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 69/184 (37%), Gaps = 6/184 (3%) Query: 80 GKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLI 139 +V G E +L + G ++ +S + L + ++ R Sbjct: 334 AADKVAGGDLEYELPARLG-----EGEVAHLSTAIHDMVVNLTHEIKQRKEAEQGLRLSA 388 Query: 140 IAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQ 199 + +++ D E++IV N+AFT++ GY E G +P LL+ + Sbjct: 389 KVFESNTEAIMITDAEQNIVMVNQAFTQITGYGADEVLGQRPK-LLSSGRHGPEFYEAFW 447 Query: 200 QLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEG 259 L + E + GE +IS + D + + + V F DITE ++ + Sbjct: 448 HALRANDLWRGEIWNKRKNGEIFPEWVTISALRDETSQISHYVAVFLDITERKKEEERIN 507 Query: 260 NILA 263 + Sbjct: 508 YLAN 511 Score = 74.3 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 55/154 (35%), Gaps = 10/154 (6%) Query: 7 DNAADGIFFPA--LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 A G+ A E N ++ + ++ N A ++ GY +EV+G +L Sbjct: 378 KEAEQGLRLSAKVFESNTEAIMITDAEQNIVMVNQAFTQITGYGADEVLGQRPKLLSSGR 437 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYLALV 122 P E H + E+ ++K+G W + + +Y+A+ Sbjct: 438 HGPEFYEAFWHALRAN----DLWRGEIWNKRKNGEIFPEWVTISALRDETSQISHYVAVF 493 Query: 123 RDASVEMAQKEQTRQLI--IAVDHLDRPVIVLDP 154 D + ++E+ L + L ++ D Sbjct: 494 LDITERKKEEERINYLANYDVLTGLPNRYLLSDR 527 >UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q478F7_DECAR Length = 739 Score = 755 bits (1950), Expect = 0.0, Method: Composition-based stats. Identities = 194/704 (27%), Positives = 315/704 (44%), Gaps = 53/704 (7%) Query: 137 QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEF------ 190 + +H R +I+ +P+ I NRA +M GY E G + L ++ + Sbjct: 30 LQLSIFEHAGRAIILTNPDGLISYFNRAAQQMLGYTPEEVVGRETPLLFHLADEISACAR 89 Query: 191 ---------PADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNL 241 P L RD+ ++ + + G + + ++S + D +Q Sbjct: 90 LYSCEPDGTPPAGFGVFISRLKLKIRDEADWTYVRKDGSHLPVSLAVSVLRDAKGGVQGY 149 Query: 242 VMTFSDITEERQIRQLEGNILAAMCSSPPF--HEMGEIICRNIESVLNESHVSLFALRNG 299 + SDI+E R++ A S ++ + I R ++ + S Sbjct: 150 LGIASDISERRRMEHDLRIAAIAFESQAAIMVTDVNQRILRVNQAFTKLTGYSAEEAIGQ 209 Query: 300 MPIHWASSSHGAEIQNA--------QSWSATI--RQRDGAPAGILQIKT---SSGAETSA 346 P S A+ A W I R+++G + + + Sbjct: 210 TPGMLKSGRQDADFYAAMWCSLGQCGHWQGEIWNRRKNGEIFPEWLTISGVRDGRGKVTH 269 Query: 347 FIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP-- 404 ++ +DIS + + I L +DP+T +PNR L N LD A Sbjct: 270 YVSTFSDISN--------LKVAESEIHHLAFYDPLTAMPNRRLLLNRLDQACVSAKRSGQ 321 Query: 405 --VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN 462 + +I +DH + + D+LG+ D L+EV R ++ R G +FV++ E Sbjct: 322 FGALLIIDIDHFKTLNDTLGHDVGDHLLVEVARRLSACIREGDTAARQGGDEFVVMLEEL 381 Query: 463 DVSN------ITQIADELRNVVSKPIMIDD-KPFPLTLSIGISYDLGK--NRDYLLSTAH 513 +A+++R +++P +++ + + SIGIS G+ D LL A Sbjct: 382 GSEQEGAAVQAEIVAEKIRLELARPYLLNGDTEYFRSASIGISLFFGQEKTIDILLKQAD 441 Query: 514 NAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELY 573 A+ + G N +FF AM + ER L A L+ A+ ++ L QPQ+ A L Sbjct: 442 IALYKAKDAGRNAIRFFDTAMQTTLDERAELEAGLRRALVRDEFVLYVQPQVDAV-RRLI 500 Query: 574 GIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIH-IPAL 632 G EAL RW P V P+ FIPLAEE G I IG WV+ +AC +L W L Sbjct: 501 GAEALLRWQPPGRAMVAPNDFIPLAEETGLIVPIGIWVLDQACAELRRWADDPRSASLFL 560 Query: 633 SVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGV 692 SVN+SA FR QV+DA+ G + L +E+TES+++++ E+ +++Q LR +GV Sbjct: 561 SVNVSARQFRQADFVAQVADALARHGANPRLLKLELTESLLLDNVEEVIEKMQALRTIGV 620 Query: 693 GLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVV 752 S+DDFGTG++ LS L P ++K+D+SF+ A++ AI ++G +L L+VV Sbjct: 621 RFSLDDFGTGYASLSYLKRFPFEQLKVDRSFIRDININPDDAAIVRAIIAMGNTLRLSVV 680 Query: 753 AEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLP 796 AEGVE Q L K C + QGY F RP+ ++ + S P Sbjct: 681 AEGVEDDLQHAYLVKHECSLFQGYLFGRPMSFDDFRASLGSEPP 724 Score = 162 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 61/265 (23%), Positives = 101/265 (38%), Gaps = 18/265 (6%) Query: 12 GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPE 71 + E +L N + + +FN AA+++ GY EEV+G +L + Sbjct: 29 DLQLSIFEHAGRAIILTNPDGLISYFNRAAQQMLGYTPEEVVGRETPLLFHLADEISACA 88 Query: 72 YIRHNREGGKARVEGMSR-------------ELQLEKKDGSKIWTRFALSKVSA--EGKV 116 + G G + +KDGS + A+S + G Sbjct: 89 RLYSCEPDGTPPA-GFGVFISRLKLKIRDEADWTYVRKDGSHLPVSLAVSVLRDAKGGVQ 147 Query: 117 YYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 YL + D S + R IA + ++V D + I++ N+AFT++ GY EA Sbjct: 148 GYLGIASDISERRRMEHDLRIAAIAFE-SQAAIMVTDVNQRILRVNQAFTKLTGYSAEEA 206 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 G P L + + AD + L + Q E + GE +IS V D Sbjct: 207 IGQTPGMLKSGRQ-DADFYAAMWCSLGQCGHWQGEIWNRRKNGEIFPEWLTISGVRDGRG 265 Query: 237 HLQNLVMTFSDITEERQIRQLEGNI 261 + + V TFSDI+ + ++ Sbjct: 266 KVTHYVSTFSDISNLKVAESEIHHL 290 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 755 bits (1950), Expect = 0.0, Method: Composition-based stats. Identities = 183/700 (26%), Positives = 323/700 (46%), Gaps = 35/700 (5%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPE-RHIVQCNRAFTEMFGYCISEASGM 179 ++ E+ R L + + + + H ++ N +++ GY SE + Sbjct: 405 YTNQLELQRQTSEKDRLLKHFFELPLFGMAITHGQTGHWIRFNHQLSDLLGYSHSEMA-E 463 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKT-ARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 L E+ + + Q+ E L + G+ I++ V ++ Sbjct: 464 HTLLSLTANEYQEADIAAMYQMTQDLCDGYLCEKQLRRKDGQLIYVNVDTRCVRTADRNI 523 Query: 239 QNLVMTFSDITEERQIR---QLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFA 295 ++ DI+ +++ + + + I R + S Sbjct: 524 AFIISVIEDISSQKENEAILRQSATVFDNTREGIMITDKNAQIIRVNPAFAELFGFSQHE 583 Query: 296 LRNGMPIHWASSSHGAEIQN--------AQSWSATI--RQRDGAPAGIL---QIKTSSGA 342 L+ P+ + S H E + W I R++D ++ + Sbjct: 584 LQGKTPVIFKSGKHTHEFYQHIRDSLNTSAFWRGEIWNRRKDNHIIPLICSISAVRNDKQ 643 Query: 343 ETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA- 401 + + ++ +DIS+ + S + L DP+T LPNR L L +D A Sbjct: 644 QLTHYVSVYSDISK--------LKASEAKLAHLAHHDPLTQLPNRTLLTINLSHAIDLAV 695 Query: 402 ---VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV 458 + ++ +D +DV DS G+ D L EV R R +++ +CR+ G +F ++ Sbjct: 696 RNHHRIALLMLDLDRFKDVNDSFGHQIGDALLQEVARRLRRRVRISDTICRLGGDEFTVL 755 Query: 459 SLENDV-SNITQIADELRNVVSKPIMI-DDKPFPLTLSIGISY--DLGKNRDYLLSTAHN 514 N ++ A+++ ++ P + + + + SIGIS + G+ LL A Sbjct: 756 IEGNPALHDVEHFAEDILQLLKDPFSLPNGREVIIGASIGISLYPEHGQTPKELLQQADA 815 Query: 515 AMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYG 574 AM + +G + +++FS + ++RL L L+ A+ N+L L +QPQI + + G Sbjct: 816 AMYRAKAHGRSCFRYFSDELTRAAEQRLDLEVRLQRALRLNELCLYFQPQIDISSNRIIG 875 Query: 575 IEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSV 634 EAL RW DP HG + P++FIP+AEE G I+ +G WV+ EACRQ EW+ + + L+V Sbjct: 876 AEALVRWQDPAHGLISPAQFIPVAEETGLIKQLGEWVLLEACRQGKEWQQKGLPAINLAV 935 Query: 635 NLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGL 694 N+S + FR++ + V +A+ G L +E+TES +M H+ E + + LR G+ L Sbjct: 936 NISPVQFRNSNILESVFNALKQTGYPASLLELELTESALMTHENEAVEILSALRKYGIRL 995 Query: 695 SVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAE 754 ++DDFGTG+S L+ L P+ +KIDKSFVD +K + + AI ++ +L L V+AE Sbjct: 996 AIDDFGTGYSSLAYLKRFPLDVLKIDKSFVDDIPHKKDDMEIAAAIVAMAHTLRLKVLAE 1055 Query: 755 GVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 GVET+EQ L++ C QGY S P+PA++ + + Sbjct: 1056 GVETEEQLTFLKEQGCDCYQGYLMSPPVPADQFEQLLRAQ 1095 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 102/267 (38%), Gaps = 7/267 (2%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLI-NENDEVMFFNPAAEKLWGYKREEVIGNNIDM 59 ++L + D + E + G + + + FN L GY E+ + + Sbjct: 409 LELQRQTSEKDRLLKHFFELPLFGMAITHGQTGHWIRFNHQLSDLLGYSHSEMAEHTLLS 468 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VY 117 L + + A I + + +G E QL +KDG I+ V + + Sbjct: 469 LTANEYQEA---DIAAMYQMTQDLCDGYLCEKQLRRKDGQLIYVNVDTRCVRTADRNIAF 525 Query: 118 YLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 ++++ D S + + RQ D+ +++ D I++ N AF E+FG+ E Sbjct: 526 IISVIEDISSQKENEAILRQSATVFDNTREGIMITDKNAQIIRVNPAFAELFGFSQHELQ 585 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 G P + + + ++ L +A + E + I + SIS V + Sbjct: 586 GKTP-VIFKSGKHTHEFYQHIRDSLNTSAFWRGEIWNRRKDNHIIPLICSISAVRNDKQQ 644 Query: 238 LQNLVMTFSDITEERQIRQLEGNILAA 264 L + V +SDI++ + ++ Sbjct: 645 LTHYVSVYSDISKLKASEAKLAHLAHH 671 >UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax=cellular organisms RepID=Q607T2_METCA Length = 1346 Score = 754 bits (1949), Expect = 0.0, Method: Composition-based stats. Identities = 197/692 (28%), Positives = 321/692 (46%), Gaps = 28/692 (4%) Query: 121 LVRDASVEM---AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 L RDA E +E + +A + + + D R N + G + Sbjct: 645 LARDAERERSEMRLRESEERFRLAANSAPVLIWMGDTARGCTFFNDMWLNFTGRSLEYEL 704 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 G ++ PE + + E+ L R GE I +P +D Sbjct: 705 GDGWLEGMH-PEDRSRWICAYSAAFDARKPFEIEYRLRRRDGEYRTILGKATPRFDAGGE 763 Query: 238 LQNLVMTFSDITEERQIRQLE---GNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLF 294 + + DI++ ++ + G + A+ S + +I + + + S Sbjct: 764 FIGYIGSCIDISDRKKGDESLLLAGKVFEAVRESIIVTDANRVIVAVNPAFSDMTGYSPE 823 Query: 295 ALRNGMPIHWASSSHGAEIQ--------NAQSWSATI--RQRDGAPAGILQIKTSSGAET 344 P S HG E SW R+++G +L+ + ET Sbjct: 824 EAVGRTPAFLQSGRHGKEYYAAMWRAVDQEGSWQGEFWNRRKNGELFAVLETIVTVRDET 883 Query: 345 SAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS- 403 A + + +AA +++ +HI L +DP++ LPNR L + + A Sbjct: 884 GAMVNYIG-----VAADISSLKEAEEHIHHLAYYDPLSALPNRRYLMERAEYALALAERR 938 Query: 404 ---PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL 460 V + VDH +DV DSLG+ D+ L+ V + +E + + R+ G +F L+ Sbjct: 939 KEELAVVFLDVDHFKDVNDSLGHQVGDELLVRVATQIKEFTRETDTVARLGGDEFALLLP 998 Query: 461 ENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDY 518 + ++Q+AD++ + KP + F +T SIGIS G + + LL A AM + Sbjct: 999 DLGRDAVSQVADKILAALRKPFEHSGQTFAVTGSIGISLYPHDGTDFETLLRNADTAMYH 1058 Query: 519 IRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEAL 578 ++ G N ++F+ P MN + RL + + L+EAI +L+ +QP+I G L G EAL Sbjct: 1059 AKQQGRNQFRFYDPGMNVDILARLTVLSELREAIPAGELRTFFQPEIDLANGTLVGAEAL 1118 Query: 579 ARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSA 638 RW P G + P +FIP+AE I I WV+ + CR LA+W+ + + VNL+A Sbjct: 1119 VRWQHPTRGLLSPDQFIPVAESNDLIIAISDWVLEDTCRHLAQWKKADQAPITVGVNLAA 1178 Query: 639 LHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDD 698 HFR +L +V + +G+ G L +E+TES +++ D + +Q L +G LS+DD Sbjct: 1179 RHFRDPRLVPRVKSLLCRYGVPGSSLQLELTESTLLDADAQTMIVLQELIALGCSLSIDD 1238 Query: 699 FGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVET 758 FGTG+S LS L +LP+ +KID+SFV + + + ++G SL L V+AEGVET Sbjct: 1239 FGTGYSSLSYLKNLPIATLKIDQSFVRDIAFDADDRTISGTVVALGHSLGLKVIAEGVET 1298 Query: 759 KEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 +EQ +L + C QGY FSRPL ++E W Sbjct: 1299 EEQRRILLEQGCDFGQGYLFSRPLSSKEFIKW 1330 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 87/256 (33%), Gaps = 7/256 (2%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP 67 ++ F A + + + FFN G E +G+ + + R Sbjct: 659 RESEERFRLAANSAPVLIWMGDTARGCTFFNDMWLNFTGRSLEYELGDGWLEGMHPEDRS 718 Query: 68 AHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRDA 125 +I AR E +L ++DG + G + Y+ D Sbjct: 719 ---RWICAYSAAFDARKP-FEIEYRLRRRDGEYRTILGKATPRFDAGGEFIGYIGSCIDI 774 Query: 126 SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 S E + + +IV D R IV N AF++M GY EA G P L Sbjct: 775 SDRKKGDESLLLAGKVFEAVRESIIVTDANRVIVAVNPAFSDMTGYSPEEAVGRTP-AFL 833 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 + + + + + Q EF + GE + +I V D + N + Sbjct: 834 QSGRHGKEYYAAMWRAVDQEGSWQGEFWNRRKNGELFAVLETIVTVRDETGAMVNYIGVA 893 Query: 246 SDITEERQIRQLEGNI 261 +DI+ ++ + ++ Sbjct: 894 ADISSLKEAEEHIHHL 909 Score = 80.9 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 62/162 (38%), Gaps = 15/162 (9%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 F + +L + + ++ N A L+GY REE+ G + ++ D+ E + Sbjct: 361 FEYFVRYANDAILLADRDHRIVDVNDRALDLYGYSREELAGMTLADVVAGDV-----EGV 415 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQK- 132 H R G E +KDG + ++ +S EG + A+VRD + + Sbjct: 416 EHGRLDEALARGGGVWESVHTRKDGVPVPVELSVRSISVEGSDFVQAIVRDVTERKRIEL 475 Query: 133 --EQTRQLIIAVDHLDRPVI-------VLDPERHIVQCNRAF 165 + + L + ++ ++ + D I N F Sbjct: 476 ALARQKNLYSLLAQTNQIIVRHTSEQELFDSVCRIAIRNGGF 517 Score = 74.3 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 83/262 (31%), Gaps = 32/262 (12%) Query: 126 SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 E + + +R+ V + + +++ D + IV N +++GY E +GM ++ Sbjct: 349 EAEKERADLSRRFEYFVRYANDAILLADRDHRIVDVNDRALDLYGYSREELAGMTLADVV 408 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 + RL + L + E + + G + ++ S+ + + + Sbjct: 409 -AGDVEGVEHGRLDEALARGGGV-WESVHTRKDGVPVPVELSVRSI--SVEGSDFVQAIV 464 Query: 246 SDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWA 305 D+TE ++I + ++ + + ++ + Sbjct: 465 RDVTERKRIELALAR----------QKNLYSLLAQTNQIIVRHTSEQ----------ELF 504 Query: 306 SSSHGAEIQNAQ---SWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALA 362 S I+N +W I G + + AD + H Sbjct: 505 DSVCRIAIRNGGFLFAWIGMIENETGDLVPVAR-YGDDAGYVGRLHLSRADTAHHHGPTR 563 Query: 363 LEQEKSRQHI--EQLIQFDPMT 382 + I + L DP+T Sbjct: 564 MAVAAGHHVISDDFLA--DPLT 583 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 754 bits (1949), Expect = 0.0, Method: Composition-based stats. Identities = 164/596 (27%), Positives = 284/596 (47%), Gaps = 30/596 (5%) Query: 218 TGEKIWIKASISPVYDVLAHLQNLVMTFSDITEE-RQIRQLEGNILAAMCSSPPFHEMGE 276 G ++ + + + + L+ + D E RQ ++ + + + Sbjct: 367 QGHRLLQEERTAELAGANSALETEIAEHRDAEEALRQRQRAIDSSSNGIMITDALELDHP 426 Query: 277 IICRNI--ESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWS-----ATIR--QRD 327 II N E + + + + G E+ A +R ++D Sbjct: 427 IIYVNPAFERITGYAASEVLGRNPRLLCSGDREQLGLEVIRVALCELREGHAELRNYRKD 486 Query: 328 GAPAG----ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTG 383 G+ + + ++G E + ++ V DI+ E+++ + +E D +TG Sbjct: 487 GSLFWNALSVSPVLNAAG-EVTNYVGIVNDIT--------ERKRYEEQLEYQSNHDGLTG 537 Query: 384 LPNRNNLHNYLDDLVDKA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFRE 439 LPNRN L + + + A V+ I +DH + + DSLG+ D+ L R E Sbjct: 538 LPNRNLLGDRIGQALTYAERYQRQTAVFFIDLDHFKFINDSLGHDMGDKLLQIAARRLSE 597 Query: 440 KLKPDQYLCRIEGTQFVLVSLENDV-SNITQIADELRNVVSKPIMIDDKPFPLTLSIGIS 498 ++ + R G +FV+V + V + ++A ++++ V +P I + ++ S GIS Sbjct: 598 CVRSIDTVARHGGDEFVIVLSDLAVSEDAAKVARKIQDAVCRPYQIGEHELVVSCSTGIS 657 Query: 499 YD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQ 556 G + LL A AM ++ G N +QF++ +N++V RL + L+ A+ ++ Sbjct: 658 LYPKDGSDAQVLLKNADVAMYRAKQCGRNNFQFYTGDLNDIVLARLTMEKYLRRALERDE 717 Query: 557 LKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEAC 616 + YQP++ +G + G+EAL RW P G + P+ FIPLAEE G I IG WV+ AC Sbjct: 718 FLVHYQPKVDLLSGRITGMEALVRWQSPELGFISPASFIPLAEETGLIVAIGEWVLRTAC 777 Query: 617 RQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEH 676 Q W+ + ++VNLS FR L + V G+ + +E+ ES++M+ Sbjct: 778 AQNKAWQDDGLPPMVVAVNLSPRQFRQEDLADTVHRIAEETGLAPRYIELEVVESLLMDD 837 Query: 677 DTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILAL 736 + L+++GV L++DDFGTG+S LS L P +KID+SFV + A+ Sbjct: 838 VDGAVAMLDALKELGVQLTMDDFGTGYSSLSYLKRFPFDMMKIDQSFVRDITRDPGSAAI 897 Query: 737 LEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 + + S+ +LNL VVAEG+ET+ Q LR + C +QG++FSRP+PA E + Sbjct: 898 VRTVISLAHTLNLRVVAEGIETEGQLGYLRGLACDEMQGFYFSRPVPAAEFEQMLR 953 Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 96/261 (36%), Gaps = 10/261 (3%) Query: 111 SAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDP---ERHIVQCNRAFTE 167 +AE AL + + +E RQ A+D +++ D + I+ N AF Sbjct: 377 TAELAGANSALETEIAEHRDAEEALRQRQRAIDSSSNGIMITDALELDHPIIYVNPAFER 436 Query: 168 MFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKAS 227 + GY SE G P LL + ++ L + E + G W S Sbjct: 437 ITGYAASEVLGRNP-RLLCSGDREQLGLEVIRVALCELREGHAELRNYRKDGSLFWNALS 495 Query: 228 ISPVYDVLAHLQNLVMTFSDITEERQIRQLE--GNILAAMCSSPPFHEMGEIICRNIESV 285 +SPV + + N V +DITE ++ + + + P + +G+ I + + Sbjct: 496 VSPVLNAAGEVTNYVGIVNDITERKRYEEQLEYQSNHDGLTGLPNRNLLGDRIGQALTYA 555 Query: 286 LNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETS 345 + + + + S G ++ + + R+ I + G E Sbjct: 556 ERYQRQTAVFFIDLDHFKFINDSLGHDMGD-KLLQIAARRLSECVRSIDTVARHGGDE-- 612 Query: 346 AFIERVADISQHMAALALEQE 366 F+ ++D++ A + ++ Sbjct: 613 -FVIVLSDLAVSEDAAKVARK 632 Score = 83.9 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 48/227 (21%), Positives = 87/227 (38%), Gaps = 22/227 (9%) Query: 5 DADNAADGIFFPALEQNMMGAVLINE---NDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 DA+ A A++ + G ++ + + +++ NPA E++ GY EV+G N +L Sbjct: 396 DAEEALRQR-QRAIDSSSNGIMITDALELDHPIIYVNPAFERITGYAASEVLGRNPRLLC 454 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKVY-YL 119 D E IR + EL+ +KDGS W ++S V +A G+V Y+ Sbjct: 455 SGDREQLGLEVIRVAL----CELREGHAELRNYRKDGSLFWNALSVSPVLNAAGEVTNYV 510 Query: 120 ALVRDASVEMAQKEQTRQLI--IAVDHLDRPVIVLDPERHIVQCNRAFTEMFG------- 170 +V D + +EQ + L ++ D + + Sbjct: 511 GIVNDITERKRYEEQLEYQSNHDGLTGLPNRNLLGDRIGQALTYAERYQRQTAVFFIDLD 570 Query: 171 --YCISEASGMQP-DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLL 214 I+++ G D LL I +R + + D+ +L Sbjct: 571 HFKFINDSLGHDMGDKLLQIAARRLSECVRSIDTVARHGGDEFVIVL 617 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 754 bits (1948), Expect = 0.0, Method: Composition-based stats. Identities = 175/593 (29%), Positives = 290/593 (48%), Gaps = 32/593 (5%) Query: 222 IWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI---I 278 ++ S SP+ D LA L+ S E Q + A+ SP + ++ I Sbjct: 711 LYYSKSRSPMADELAALERGAHLASLAIERAQTGAWLNKLSQAVEQSPNSIVITDLNANI 770 Query: 279 CRNIESVLNESHVSLFALRNGMPIHWASSS--------HGAEIQNAQSWSATI--RQRDG 328 ++ + + +L + P S ++ + Q W + R++DG Sbjct: 771 EYANDAFVKTTGYTLPEVMGKNPRILHSGKTTVETYAAMWTQLNSGQMWRGELINRRKDG 830 Query: 329 ----APAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGL 384 A I ++ + G + ++ DI+ EQ++ I QL FD +TGL Sbjct: 831 TEYVELARISPLRHTDGR-VTNYLSIKEDIT--------EQKQVEARIRQLAHFDLLTGL 881 Query: 385 PNRNNLHNY----LDDLVDKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREK 440 PN+ L + + A V + +DH +++ D+LG+ D+ L+ + R + Sbjct: 882 PNQTLLKDRAGFAMQMAQRSAHHLAVLFLDIDHFKNINDTLGHRIGDELLVHLAKRMKLL 941 Query: 441 LKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY- 499 L+ + L R G +F+LV + D +A+++ V+K I+ +T SIGI+ Sbjct: 942 LRDEDTLSRFGGDEFILVLPDTDADGAAHVAEKILETVAKTCYIEQHELVVTPSIGIAMY 1001 Query: 500 -DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLK 558 G + D L +A AM +++G N ++FF+ M RL+L AL++A+S NQ + Sbjct: 1002 PSDGMDFDKLYQSADVAMYRAKQDGRNNFRFFTSEMQARSARRLLLENALRQALSRNQFE 1061 Query: 559 LVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQ 618 L YQPQI + G++ G EAL RW+ P G + P+ FIP+AEE G I +IG WV+ A +Q Sbjct: 1062 LHYQPQISMQDGKIVGAEALLRWYHPELGSISPAEFIPVAEESGLILSIGEWVLRTAVQQ 1121 Query: 619 LAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDT 678 + W+ +++NLSA+ FR +L V +H + H + +E+TES+ M++ Sbjct: 1122 VKRWQDAGHPPVTVAINLSAVQFRQARLSELVMQILHEANLAPHWIELELTESVAMDNPL 1181 Query: 679 EIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLE 738 + L G+ +S+DDFGTG+S LS L V ++KID+SFV + A++ Sbjct: 1182 VAIGVMNDLHGCGIRMSIDDFGTGYSSLSYLRKFKVNKLKIDQSFVRDLADDIESRAIVT 1241 Query: 739 AITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 AI ++ S+ +AEGVET Q LR C +QGY+FSRPL ++ Sbjct: 1242 AIITLASSMGFQTIAEGVETAGQLAFLRLQGCNEVQGYYFSRPLTVALFEAFV 1294 Score = 90.9 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 62/163 (38%), Gaps = 6/163 (3%) Query: 99 SKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHI 158 S+ L+ + + LA+ R + +L AV+ +++ D +I Sbjct: 716 SRSPMADELAALERGAHLASLAIERAQTGAW-----LNKLSQAVEQSPNSIVITDLNANI 770 Query: 159 VQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRT 218 N AF + GY + E G P +L+ + + + L + E + + Sbjct: 771 EYANDAFVKTTGYTLPEVMGKNP-RILHSGKTTVETYAAMWTQLNSGQMWRGELINRRKD 829 Query: 219 GEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNI 261 G + A ISP+ + N + DITE++Q+ + Sbjct: 830 GTEYVELARISPLRHTDGRVTNYLSIKEDITEQKQVEARIRQL 872 Score = 83.9 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 64/428 (14%), Positives = 132/428 (30%), Gaps = 78/428 (18%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 + +E + +L + +F N A + G EV+ + + + + + Sbjct: 165 YALVVENGLPLGILTERDMAGLFVNGAPVE--GVSLREVMHSPVLTVSHQTPVFEMAGLM 222 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKE 133 + +R V+ L + K+ R A + ++ E L R S+E + Sbjct: 223 QASRYRHLVVVDDAGLVLGMVTL--HKLMARIAATVMNEE------TLRRQESLEHSMHH 274 Query: 134 QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPAD 193 QL + V + + + D E + CN F FG ++ G ++ + Sbjct: 275 AESQLRLIVKTIPDLIWLKDVEGVYLSCNPMFERFFGAIEADIVGKTDYDFVSREQADFF 334 Query: 194 NRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEE-- 251 +L +E++ G + ++ + SP+++ + L ++ DITE Sbjct: 335 RAHDRAAMLADKPSINEEWVTFADDGHRACLETTKSPMFNAVGQLIGVLGIAHDITERLA 394 Query: 252 --------RQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLN---------------- 287 Q+ A+ S E+ IC++ Sbjct: 395 AAKKIERLTQLYNALSQCNQAIVHSSSEAELFAQICQDAVRFGGLKMAWVGVVDHDTGWI 454 Query: 288 --------------------------ESHVSLFALRNGMPI------HWASSSHGAEIQN 315 + A+R P+ H ++ +I Sbjct: 455 RPVASYGDGMDYLQGAQMSVDEASPLGRGPTGTAIRENRPVWCQDYQHDTATRPWHQIGA 514 Query: 316 AQSW---SATIRQRDGAPAGILQIKTS-----SGAETSAFIERVADISQHMAALALE--Q 365 + W +A +R+G G + S + E DIS + E + Sbjct: 515 SYGWGASAALPLRRNGVAIGAFTLYNSDINGFDDESRTLLTEMATDISFALDNFERETLR 574 Query: 366 EKSRQHIE 373 ++ IE Sbjct: 575 KRLELQIE 582 Score = 72.4 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 58/147 (39%), Gaps = 8/147 (5%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 A+EQ+ V+ + N + + N A K GY EV+G N +L + Sbjct: 750 LSQAVEQSPNSIVITDLNANIEYANDAFVKTTGYTLPEVMGKNPRILHSGKTTVETYAAM 809 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS-AEGKVY-YLALVRDASVEMAQ 131 G+ EL +KDG++ +S + +G+V YL++ D + + Sbjct: 810 WTQLNSGQM----WRGELINRRKDGTEYVELARISPLRHTDGRVTNYLSIKEDITEQKQV 865 Query: 132 KEQTRQLIIA--VDHLDRPVIVLDPER 156 + + RQL + L ++ D Sbjct: 866 EARIRQLAHFDLLTGLPNQTLLKDRAG 892 Score = 51.2 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 50/148 (33%), Gaps = 5/148 (3%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 L + + A+ ++ L + + NP E+ +G +++G + Sbjct: 268 LEHSMHHAESQLRLIVKTIPDLIWLKDVEGVYLSCNPMFERFFGAIEADIVGKTDYDFVS 327 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYYLA 120 R+ H+R A ++ E DG + S + + + L Sbjct: 328 REQADFFRA---HDRAAMLADKPSINEEWVTFADDGHRACLETTKSPMFNAVGQLIGVLG 384 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRP 148 + D + +A ++ +L + L + Sbjct: 385 IAHDITERLAAAKKIERLTQLYNALSQC 412 >UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B8HP13_CYAP4 Length = 1094 Score = 754 bits (1948), Expect = 0.0, Method: Composition-based stats. Identities = 202/829 (24%), Positives = 354/829 (42%), Gaps = 60/829 (7%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGY-KREEVIGNNIDMLIPRD 64 A A+ + E + G + + NPA +++GY EE++ + D+ Sbjct: 270 ALRQAEEKYRSIFENAVEGIFQSSPEGRYIRVNPALARMYGYDSPEELLAHLTDIGRQLY 329 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALV 122 + P E + + E Q+ ++DGS IW V +YY V Sbjct: 330 VDP---ERRAEFQRLIDQQTIVTHFEAQVYRRDGSIIWITEHARAVRDGTGKLLYYEGTV 386 Query: 123 RDASVEMAQK----EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 + + + + T +L L +D + I+ E G Sbjct: 387 ENITDRKRTELQLLQTTSELKAIFQALPDLYFRVDHDSTILDFKAGRRTDLYLEPEEFLG 446 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 + +L P + ++L AR E++L GE+ +A + P+ Sbjct: 447 RRMTDVLPPP-VATQFSGAIDRILSGEARVDLEYVLPMPDGEQ-TFEARLLPLL-----Q 499 Query: 239 QNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIES----VLNESHVSLF 294 ++ +IT+ ++ F E I ++ S N + ++ Sbjct: 500 TQIIAVIRNITKRKRAENELRQAEE--KYRSIFENATEGIFQSSPSGSYISANPALARIY 557 Query: 295 ALRNGMPIHWASSSHGAEIQ-----------------NAQSWSATIRQRDGAPAGIL--- 334 + + + G ++ + + + ++DG+ I Sbjct: 558 GYDSPQELQHHLTDIGRQLYVNPDRRQQFVHSILEQGQVTDFESQVYRKDGSVIWISENA 617 Query: 335 -QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNY 393 ++ G F V DIS ++++ I D +TGLPNR + Sbjct: 618 RAVRDRQGN-ILYFEGTVEDISA--------RKQAELTIHYQAFHDLLTGLPNRALFDDR 668 Query: 394 LDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCR 449 L+ + A V+ + +D + + D+LG+A DQ L +V R L+ + R Sbjct: 669 LNQALADARRYQHLLAVFFLDLDRFKVINDTLGHAIGDQLLQQVAQRLLPCLREIDTIAR 728 Query: 450 IEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRD 506 G +F L+ ++ +IA+ L + P + +T S+GI+ G++ Sbjct: 729 WGGDEFTLLLPHVQTPADSVKIAERLLASLKPPFSLKGHNLHITASLGIALYPHDGEDGT 788 Query: 507 YLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIF 566 LL A A+ ++ G NG ++P +N E L L + L +A+ +L + YQPQI Sbjct: 789 TLLRNADAALYRAKEEGRNGLYCYTPMLNSRGHELLALESELHKALEQQELDVYYQPQIN 848 Query: 567 AETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN 626 A TGE+ +EAL RW G V P FI LAEE G I IG+WV+ AC Q +W+++ Sbjct: 849 AATGEILRLEALVRWQHSQLGLVSPQTFIGLAEENGLIMPIGQWVLETACHQCRQWQARG 908 Query: 627 IHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQI 686 +VNLS F+ L QV++ + G+ +L +EITE+ M++ + Sbjct: 909 FPGLGTAVNLSVRQFQQPHLVQQVAETLQYTGLAADRLELEITETTAMQNVNLTRTLLHE 968 Query: 687 LRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQS 746 L MGVG+++DDFG+G+S L+ L P+ IKID++F+ + A+++A+ ++G+ Sbjct: 969 LDQMGVGIALDDFGSGYSSLNYLRQFPLHSIKIDRTFIQELPYSVQDQAIVKAVIALGRG 1028 Query: 747 LNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 LNL+VVAEGVE++ Q ++LR + C +IQGYFF P+ A + + Sbjct: 1029 LNLSVVAEGVESQSQLKVLRSLGCDIIQGYFFGPPIAAAAMTQLLEQCT 1077 Score = 140 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 92/258 (35%), Gaps = 9/258 (3%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A A+ + + + +++ V++ +P ++L GY + G + L+ Sbjct: 144 ALIQAEARWRSLIHNSSDLITILDAQGTVLYHSPVLKRLLGYHPQNCEGKSAFGLVHPQD 203 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLAL-VRD 124 R + + ++ ++ E + +DGS + + A+ V + + RD Sbjct: 204 RK---QVQQTFQQAITHTEFTLTVEYRFRHQDGSWRFLESTGRNLLADPAVAGIVVNTRD 260 Query: 125 ASV----EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 + E A ++ + ++ + PE ++ N A M+GY E Sbjct: 261 ITDHKRTESALRQAEEKYRSIFENAVEGIFQSSPEGRYIRVNPALARMYGYDSPEELLAH 320 Query: 181 PDTLLNIPEFPADNRIRLQQLL-WKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 + + R Q+L+ +T E + R G IWI V D L Sbjct: 321 LTDIGRQLYVDPERRAEFQRLIDQQTIVTHFEAQVYRRDGSIIWITEHARAVRDGTGKLL 380 Query: 240 NLVMTFSDITEERQIRQL 257 T +IT+ ++ Sbjct: 381 YYEGTVENITDRKRTELQ 398 Score = 85.1 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 52/391 (13%), Positives = 123/391 (31%), Gaps = 47/391 (12%) Query: 18 LEQNMMGAVLI---NENDEVMFFNPAAEKLWGYKREEVI---GNNIDMLIPRDLRPAHPE 71 L ++ G V + + + + L GY +E+ G + + + P Sbjct: 24 LIDSLPGIVFSGSNDAQWSMQYLSRGCLALTGYSSDELAQKGGEAFNAITHPEDLPRVLA 83 Query: 72 YIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLALVRDAS--- 126 + + E ++ K G + W +V E + + D + Sbjct: 84 TLSAAIASSEP----YEVEYRIRTKSGEEKWVLEKGHRVLDEDQCTCGIEGFITDITPLK 139 Query: 127 -VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 E A + + + + + +LD + ++ + + GY G L+ Sbjct: 140 RAEAALIQAEARWRSLIHNSSDLITILDAQGTVLYHSPVLKRLLGYHPQNCEGKSAFGLV 199 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 + + + Q + E+ + G +++++ + A + +V+ Sbjct: 200 HPQDRKQVQQTFQQAITHTEFTLTVEYRFRHQDGSWRFLESTGRNLLADPA-VAGIVVNT 258 Query: 246 SDITE-----------ERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLF 294 DIT+ E + R + N + + S P + +S L Sbjct: 259 RDITDHKRTESALRQAEEKYRSIFENAVEGIFQSSPEGRYIRVNPALARMYGYDSPEELL 318 Query: 295 A-LRNGMPIHWASSSHGAEIQN-------AQSWSATIRQRDGAPAGILQ---IKTSSGAE 343 A L + + AE Q + A + +RDG+ I + + Sbjct: 319 AHLTDIGRQLYVDPERRAEFQRLIDQQTIVTHFEAQVYRRDGSIIWITEHARAVRDGTGK 378 Query: 344 TSAFIERVADISQHMAALALEQEKSRQHIEQ 374 + V +I+ +++++ + Q Sbjct: 379 LLYYEGTVENIT--------DRKRTELQLLQ 401 >UniRef50_B2JAQ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Nostocaceae RepID=B2JAQ5_NOSP7 Length = 1043 Score = 754 bits (1948), Expect = 0.0, Method: Composition-based stats. Identities = 203/825 (24%), Positives = 353/825 (42%), Gaps = 59/825 (7%) Query: 16 PALEQNMMGAVLINEN---DEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEY 72 A+ + G +L + N + +++ NPA E + GY EVIG N L DL + Sbjct: 232 RAIAASSNGIILTDPNQPDNPIIYVNPAFELITGYCASEVIGRNCRFLQGNDLEQVALQE 291 Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRDASVEMA 130 +R + + L+ +KD W L+ V ++ + D + + Sbjct: 292 LRSAIQEQREC----HVILRNYRKDNFLFWNELYLAPVFDNSGYLTNFIGIQTDITHHLQ 347 Query: 131 QKE----QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 E Q Q V + +LD + N+ M GY I E G + ++ Sbjct: 348 ALEALGKQEEQYRRIVQTATEGIWLLDKDNCTTFVNQQMATMLGYTIEEMLGATLFSFMD 407 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 N ++ ++ +F + G +W S +P+ D + + + Sbjct: 408 SEGLEIANSC--LSRRYQGIQEAHDFKFRCQDGSDLWAIISCAPLLDDQGNYAGALGMVT 465 Query: 247 DITEERQIRQLEGNILAAM-------------CSSPPFHEM------GEIICRNIESVLN 287 +IT+ + + S+ F + ++ ++ Sbjct: 466 NITDRKLAEAALQESKQRLDGILCSLEDVIWSISADTFETLYLNPAALKVYGYSVSEFFE 525 Query: 288 ESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQ---IKTSSGAET 344 S++ + ++ + Q I + DG +L + ++ Sbjct: 526 NSNLWFEVIHPEDQQQVHAAIQPLFLTEKQELEYRIVRPDGQVRWLLNRSHLIYNASGLP 585 Query: 345 SAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS- 403 DI+ E++ + + +D +TGLPNR + L+ + + Sbjct: 586 IRIDGIATDIT--------ERKLLEEKLVHNAFYDALTGLPNRILFIDRLEQAIAQMKHN 637 Query: 404 ----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLV 458 V + +D + V DSLG+ DQ L+ + R ++ L+PD + R+ G +F +L+ Sbjct: 638 PDDLFAVLFLDLDRFKVVNDSLGHLVGDQLLVTLAQRLQQCLQPDDTVARLGGDEFTILL 697 Query: 459 SLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGKN----RDYLLSTAHN 514 S + + T IA + + P + +T SIGI+ G N LL A Sbjct: 698 SHIQTIEDATDIAKHIHQALKPPFNLCGYEVFMTASIGIAL--GTNKYVQPADLLRDADT 755 Query: 515 AMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYG 574 A+ ++ G F M + E L L L+ A+ +L + YQP I +TG++ G Sbjct: 756 ALYRAKEQSQAGHIVFDTTMYDRAVELLQLETDLRWAVERQELCIFYQPIICIKTGKITG 815 Query: 575 IEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN--IHIPAL 632 EAL RW P G + P+ FIP+AEE G I IG+WV+ E+C+QL +W+ Q I L Sbjct: 816 FEALVRWQHPERGLISPTEFIPVAEETGLIIPIGQWVLTESCKQLRQWQLQFPAIKPLTL 875 Query: 633 SVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGV 692 +VNLS F L Q+S + G+ L +EITE+ ++ + ++ L+ G+ Sbjct: 876 NVNLSGKQFSQPHLIEQISQILQDTGLSSSNLKLEITETAIIASPQKATSILKQLKAFGL 935 Query: 693 GLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVV 752 L +DDFGTG+S L+ L + P+ +KID+SFV+R ++ A++ AI ++ +L ++VV Sbjct: 936 QLCIDDFGTGYSSLAYLHNFPIDVLKIDRSFVNRIDSDTEQFAIVRAIVTLADNLGMSVV 995 Query: 753 AEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPL 797 AEGVET Q L+ + C+ QGY FS+PL E+ ++S Sbjct: 996 AEGVETINQLAQLQLLQCQQAQGYLFSKPLDQEQARNLLASGQSF 1040 Score = 110 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 39/269 (14%), Positives = 106/269 (39%), Gaps = 16/269 (5%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 ++ +A + + ++ G L+++++ F N + GY EE++G + Sbjct: 346 LQALEALGKQEEQYRRIVQTATEGIWLLDKDNCTTFVNQQMATMLGYTIEEMLGATLFSF 405 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYY 118 + + + +G + + + + +DGS +W + + + + Sbjct: 406 MDSEGLEIANSCLSRRYQGIQE-----AHDFKFRCQDGSDLWAIISCAPLLDDQGNYAGA 460 Query: 119 LALVRDASV----EMAQKEQTRQLIIAVDHLDRPVIVLDPE-RHIVQCNRAFTEMFGYCI 173 L +V + + E A +E ++L + L+ + + + + N A +++GY + Sbjct: 461 LGMVTNITDRKLAEAALQESKQRLDGILCSLEDVIWSISADTFETLYLNPAALKVYGYSV 520 Query: 174 SEASGMQ--PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV 231 SE +++ + + Q L+ T + + E+ ++ G+ W+ + Sbjct: 521 SEFFENSNLWFEVIHPEDQQQVHAAI--QPLFLTEKQELEYRIVRPDGQVRWLLNRSHLI 578 Query: 232 YDVLAHLQNLVMTFSDITEERQIRQLEGN 260 Y+ + +DITE + + + + Sbjct: 579 YNASGLPIRIDGIATDITERKLLEEKLVH 607 Score = 94.0 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 54/295 (18%), Positives = 100/295 (33%), Gaps = 29/295 (9%) Query: 103 TRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLD---PERHIV 159 LS VS ++ + S + + A+ +I+ D P+ I+ Sbjct: 196 VDVNLSIVSTTNNPNVQSVEK-ISPLQEPEVDLHLMERAIAASSNGIILTDPNQPDNPII 254 Query: 160 QCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTG 219 N AF + GYC SE G L + L+ + + + Sbjct: 255 YVNPAFELITGYCASEVIGRNC-RFLQGNDLEQVALQELRSAIQEQRECHVILRNYRKDN 313 Query: 220 EKIWIKASISPVYDVLAHLQNLVMTFSDIT-----------EERQIRQLEGNILAAM--- 265 W + ++PV+D +L N + +DIT +E Q R++ + Sbjct: 314 FLFWNELYLAPVFDNSGYLTNFIGIQTDITHHLQALEALGKQEEQYRRIVQTATEGIWLL 373 Query: 266 ----CSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSA 321 C++ +M ++ IE +L + S + S IQ A + Sbjct: 374 DKDNCTTFVNQQMATMLGYTIEEMLGATLFSFMDSEGLEIANSCLSRRYQGIQEAHDFK- 432 Query: 322 TIRQRDGAPAGIL---QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIE 373 R +DG+ + + + V +I+ A A QE S+Q ++ Sbjct: 433 -FRCQDGSDLWAIISCAPLLDDQGNYAGALGMVTNITDRKLAEAALQE-SKQRLD 485 >UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ51_9DELT Length = 751 Score = 754 bits (1947), Expect = 0.0, Method: Composition-based stats. Identities = 202/720 (28%), Positives = 314/720 (43%), Gaps = 39/720 (5%) Query: 102 WTRFALSKVSAEGKVYYLALV------RDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPE 155 W + +L+ + +Y+A+ E + + + + + +D Sbjct: 39 WDQESLTAMQTYKGWFYVAVTAILVFFLVLRAEYRFRRTEERFRNLTETSNDWIWEVDTS 98 Query: 156 RHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLL 215 + + GY E G P + E + A L Sbjct: 99 GSYTYVSPQVKTLLGYRPDEVIGRTPFDFMPSGEAERVRDRFAAISAEQEAIINLVNTNL 158 Query: 216 TRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIR---QLEGNILAAMCSSPPFH 272 R G ++ ++ S P YD Q DIT +Q+ + + M Sbjct: 159 HRQGRRVILETSGVPFYDQHGTWQGYRGIDRDITVRQQLEEWLRQSAMVYENMWEGAVIT 218 Query: 273 EMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSH--------GAEIQNAQSWSATI- 323 + I + + + + P S H E+ W I Sbjct: 219 DPAGTILDVNPAFSRITGYAKDEVIGKNPRILKSDRHEQAFYQHMWRELIEKGQWRGEIW 278 Query: 324 -RQRDGAPAGI---LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFD 379 R+++G + + + +TS ++ D+SQ ++S +E L +D Sbjct: 279 NRRKNGEVYPEWLSISGVSDARGQTSYYVGVFTDLSQ--------LKQSEAKLESLAYYD 330 Query: 380 PMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVN 435 P+T LPNR LH+ L+ ++ A VY I +D + V +SL Y DQ L+ V Sbjct: 331 PLTALPNRLLLHSRLEHALEWAERHQTKVGVYFIDLDQFRVVNESLSYQAGDQLLVMVSK 390 Query: 436 RFREKLKPDQYLCRIEGTQFVLVSL-ENDVSNITQIADELRNVVSKPIMIDD-KPFPLTL 493 RF L+ D L R G +FVL+ D T+ A EL + +P +D + L Sbjct: 391 RFLSCLRVDDTLARPGGDEFVLIQEALADPQEATETARELLASLDQPFQLDGGQEIYLGA 450 Query: 494 SIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEA 551 SIGI+ G LL A AM + ++NG N + F++ MN RL + AL++A Sbjct: 451 SIGITVFPGDGTTPPDLLKNAEAAMYHAKENGRNRFSFYAEQMNADALARLQMEMALRQA 510 Query: 552 ISNNQLKLVYQPQIFAETG-ELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRW 610 + N +L L YQPQ + G EAL RW + + P +FIPLAE+ G I IG W Sbjct: 511 VENRELLLYYQPQWQLADSPSVIGAEALIRWRNKEGELIAPDQFIPLAEKSGLIGAIGDW 570 Query: 611 VIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITE 670 VI EACRQL WR Q ++VN+SA FR+ L V+ A+ I H +E+TE Sbjct: 571 VIDEACRQLRIWRDQGKKQLRVAVNVSARQFRAGNLAEVVAQALRKHEIPAHCFELELTE 630 Query: 671 SMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTE 730 S++ME E + + +GVG+++DDFGTG+S L+ L P+T +KID+SFV Sbjct: 631 SILMEKPEEAAELLNRCAALGVGIALDDFGTGYSSLAYLSRFPITVLKIDRSFVRDLNHR 690 Query: 731 KRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 + ++I ++ + L VVAEGVET+EQ L+ C + QG+ FS PLPAE+ + Sbjct: 691 SEAALIADSIIALAHRMGLQVVAEGVETEEQRAYLQSRGCDLAQGFLFSPPLPAEQFAEF 750 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 91/246 (36%), Gaps = 8/246 (3%) Query: 19 EQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNRE 78 E + ++ + + +P + L GY+ +EVIG +P E +R Sbjct: 86 ETSNDWIWEVDTSGSYTYVSPQVKTLLGYRPDEVIGRTPFDFMPSG----EAERVRDRFA 141 Query: 79 GGKARVEGMSREL-QLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRDASVEMAQKEQT 135 A E + + + G ++ + + Y + RD +V +E Sbjct: 142 AISAEQEAIINLVNTNLHRQGRRVILETSGVPFYDQHGTWQGYRGIDRDITVRQQLEEWL 201 Query: 136 RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNR 195 RQ + +++ ++ DP I+ N AF+ + GY E G P +L Sbjct: 202 RQSAMVYENMWEGAVITDPAGTILDVNPAFSRITGYAKDEVIGKNP-RILKSDRHEQAFY 260 Query: 196 IRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIR 255 + + L + + + E + GE SIS V D V F+D+++ +Q Sbjct: 261 QHMWRELIEKGQWRGEIWNRRKNGEVYPEWLSISGVSDARGQTSYYVGVFTDLSQLKQSE 320 Query: 256 QLEGNI 261 ++ Sbjct: 321 AKLESL 326 Score = 68.9 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 30/148 (20%), Positives = 58/148 (39%), Gaps = 10/148 (6%) Query: 19 EQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI-RHNR 77 E GAV+ + ++ NPA ++ GY ++EVIG N +L A +++ R Sbjct: 209 ENMWEGAVITDPAGTILDVNPAFSRITGYAKDEVIGKNPRILKSDRHEQAFYQHMWRELI 268 Query: 78 EGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYLALVRDASVEMAQKEQT 135 E G+ E+ +K+G W + + YY+ + D S + + Sbjct: 269 EKGQ-----WRGEIWNRRKNGEVYPEWLSISGVSDARGQTSYYVGVFTDLSQLKQSEAKL 323 Query: 136 RQLIIA--VDHLDRPVIVLDPERHIVQC 161 L + L +++ H ++ Sbjct: 324 ESLAYYDPLTALPNRLLLHSRLEHALEW 351 >UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodoferax ferrireducens T118 RepID=Q21R50_RHOFD Length = 1052 Score = 752 bits (1943), Expect = 0.0, Method: Composition-based stats. Identities = 190/692 (27%), Positives = 308/692 (44%), Gaps = 40/692 (5%) Query: 133 EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPA 192 ++ L +D + ++D + I + N+ +FGY + E GM+ L++ + Sbjct: 371 QREALLQQILDTSSVAIFLVDRQGRITKANQRMATLFGYPLHELQGMEYVALVHPAQRET 430 Query: 193 DNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER 252 + L L E L + W + D Q LV +DIT+ R Sbjct: 431 GRKNMLALLDSALQSVDLERLYWRADQTEFWGHLTGQRFVDGNGEEQGLVGVIADITQRR 490 Query: 253 QIRQLEGNILAAMCSS--PPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHG 310 Q A S + ++ R + + S P +S H Sbjct: 491 QTEAELRIAAIAFESEQGMAITDPQGVMLRVNRAFSAITGYSAPEAVGQNPRLLSSGRHD 550 Query: 311 AEIQ--------NAQSWSATI--RQRDGA----PAGILQIKTSSGAETSAFIERVADISQ 356 A +W I R+++G I +K +G + + ++ D+S Sbjct: 551 AAFYAAMWDSLVREGAWQGEIWNRRKNGEVFPEWLTISAVKDPAG-QATHYVATFTDLST 609 Query: 357 HMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV----DKAVSPVVYLIGVD 412 ++ + I+ L +D +TGLPNR L + L + + I +D Sbjct: 610 --------RKSAEDQIKSLAFYDTLTGLPNRRLLLDRLKQALASGARHRRQGALLYIDLD 661 Query: 413 HIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL------ENDVSN 466 + + ++ G+ DQ L EV R L+ + R G FV++ + Sbjct: 662 DFKTLNNTYGHDVGDQLLQEVAQRLSHYLRAGDTVARPGGDSFVVLLEALSTNSVEAATE 721 Query: 467 ITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLG---KNRDYLLSTAHNAMDYIRKNG 523 +++R +S+P I D T SIG++ + D L A AM + G Sbjct: 722 AENTGEKIRLALSQPYQIADHAHRSTASIGVTLFDDRQQEGIDEPLKRAELAMYQAKTAG 781 Query: 524 GNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHD 583 N +FF P M V L A L+EA+ +NQ L YQ Q+ E ++ G+EAL RW Sbjct: 782 RNTLRFFDPQMQTAVMAMAALEADLREAVRSNQFLLYYQAQVSGE-RQVAGVEALVRWQH 840 Query: 584 PLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN-IHIPALSVNLSALHFR 642 P+ G VPP+ FIPLAE+ G I +G+WV+ AC QLA W SQ ++VN+SAL F Sbjct: 841 PVRGLVPPAEFIPLAEQTGLILPLGQWVLETACAQLAAWASQPERAHLTVAVNVSALQFH 900 Query: 643 SNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTG 702 QV A+ G + +L +E+TES+++ ++ ++ L++ GVG S+DDFGTG Sbjct: 901 QADFVAQVLAALKRAGANPQRLKLELTESLLVHDAEDVIAKMITLKEQGVGFSLDDFGTG 960 Query: 703 FSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQF 762 +S LS L LP+ ++KID+ FV L + A+ + + ++ +L L+V+AEGVET+ Q Sbjct: 961 YSSLSYLKRLPLNQLKIDQGFVRDILHDANDAAIAKMVVALADTLGLSVIAEGVETEAQR 1020 Query: 763 EMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 + L C QG+ +SR LP + +M V Sbjct: 1021 DFLAAQGCHAYQGHLYSRALPIDAFEAFMRQV 1052 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 95/254 (37%), Gaps = 7/254 (2%) Query: 10 ADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAH 69 + + L+ + + L++ + N L+GY E+ G L+ R Sbjct: 372 REALLQQILDTSSVAIFLVDRQGRITKANQRMATLFGYPLHELQGMEYVALVHPAQRETG 431 Query: 70 PEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEG--KVYYLALVRDASV 127 + + + V+ E + D ++ W + + + ++ D + Sbjct: 432 RKNMLALLDSALQSVD---LERLYWRADQTEFWGHLTGQRFVDGNGEEQGLVGVIADITQ 488 Query: 128 EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI 187 + + R IA + ++ + + DP+ +++ NRAF+ + GY EA G P LL+ Sbjct: 489 RRQTEAELRIAAIAFE-SEQGMAITDPQGVMLRVNRAFSAITGYSAPEAVGQNP-RLLSS 546 Query: 188 PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSD 247 A + L + Q E + GE +IS V D + V TF+D Sbjct: 547 GRHDAAFYAAMWDSLVREGAWQGEIWNRRKNGEVFPEWLTISAVKDPAGQATHYVATFTD 606 Query: 248 ITEERQIRQLEGNI 261 ++ + ++ Sbjct: 607 LSTRKSAEDQIKSL 620 Score = 65.8 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 6/136 (4%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP 67 A+ ++ G + + ++ N A + GY E +G N +L Sbjct: 492 TEAELRIAAIAFESEQGMAITDPQGVMLRVNRAFSAITGYSAPEAVGQNPRLLSSGR--- 548 Query: 68 AHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYLALVRDA 125 H R E+ +K+G W + K A +Y+A D Sbjct: 549 -HDAAFYAAMWDSLVREGAWQGEIWNRRKNGEVFPEWLTISAVKDPAGQATHYVATFTDL 607 Query: 126 SVEMAQKEQTRQLIIA 141 S + ++Q + L Sbjct: 608 STRKSAEDQIKSLAFY 623 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 752 bits (1943), Expect = 0.0, Method: Composition-based stats. Identities = 192/703 (27%), Positives = 303/703 (43%), Gaps = 47/703 (6%) Query: 132 KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFP 191 + Q H + D I+ N AF M GY E M + P+ Sbjct: 94 DSRPEQFYAFFQHGGAGMYSYDTAGRILNANPAFCSMIGYSEHELKSMTILDV-TPPQVR 152 Query: 192 ADNRIRLQQLLWKTARD-QDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITE 250 + RL + K E L + G + + + V DITE Sbjct: 153 DETLNRLARFRDKLNEPCNFEKTYLCKDGSTLIGHFTGKWIV-SDNDSIYAVALVQDITE 211 Query: 251 ERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSL--FALRNGMPIH----- 303 + Q A + + + I I ++ + HV L A R P H Sbjct: 212 HKNADQ------AVLKEREFLQTVIDGIADPIMAISTDYHVILANRAARESHPEHALQPG 265 Query: 304 ------WASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAF---------- 347 + S Q + G A + +G E + Sbjct: 266 PTLCYQLSHGSDTPCSDTNQKCPLCQVLKTGKEAREIHEHLRAGHEKRTYEIKASPLYNE 325 Query: 348 -------IERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDK 400 IE D++ + + A EK+ QH++ + D +T LPN+ + L+ K Sbjct: 326 DHSIRGIIETSRDLTDILNSEAELNEKT-QHLQFVTTHDQLTHLPNKELFFDRLERATFK 384 Query: 401 AVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF- 455 + I +D + + DSLG+ DQ L EV R ++ L R+ G +F Sbjct: 385 THRSPFFTALLFIDLDRFKHINDSLGHEIGDQLLQEVAKRLSTSIRKTDTLARMGGDEFL 444 Query: 456 VLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGKN--RDYLLSTAH 513 +++ ++S+++ +A + + ID +T S+GIS LL+ A Sbjct: 445 IIIEDIKELSHVSTVAKNFIDTILPSFTIDGHELFITPSMGISIAPTDTQHPKELLAFAE 504 Query: 514 NAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELY 573 AM + GGN QF++ MN K R+ L + L++A++ +Q L YQPQ ++GEL Sbjct: 505 IAMYQAKGLGGNKCQFYTAEMNSRAKTRIELESYLRKAVNQDQFVLYYQPQFDIQSGELV 564 Query: 574 GIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALS 633 G EAL RW P G + P+ FIPLAEE G I IG WV+ EAC Q +W+ ++ Sbjct: 565 GCEALLRWQHPQMGMISPNDFIPLAEETGVIIEIGEWVLQEACLQNKKWQDAGHSPIRVA 624 Query: 634 VNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVG 693 VN+S FR + + GI L +EITES++M+ ++ L+ G+ Sbjct: 625 VNISPRQFREPGFLEMIERVVQTTGIKPEWLELEITESLLMDDIDSAINILKQLKAKGIH 684 Query: 694 LSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVA 753 L++DDFGTG+S LS L P++ +KID+SFV T+ ++ +A+ ++ S+NL VVA Sbjct: 685 LAIDDFGTGYSSLSYLKRFPLSRLKIDRSFVRDITTDDNDASITKAVIALAHSMNLKVVA 744 Query: 754 EGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLP 796 EG+ET+EQ L++ C V QGY +S P+ E + + P Sbjct: 745 EGIETQEQLLFLKEKGCEVGQGYLYSPPVAKEPFDHFFTDGSP 787 Score = 85.1 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 88/248 (35%), Gaps = 17/248 (6%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 F+ + G + ++ NPA + GY E+ I + P +R + Sbjct: 100 FYAFFQHGGAGMYSYDTAGRILNANPAFCSMIGYSEHELKSMTILDVTPPQVRDETLNRL 159 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALS-KVSAEGKVYYLALVRDASVEMAQK 132 R+ + E KDGS + F VS +Y +ALV+D + Sbjct: 160 ARFRDKLNEPC---NFEKTYLCKDGSTLIGHFTGKWIVSDNDSIYAVALVQDITEHKNAD 216 Query: 133 EQ----TRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 + L +D + P++ + + H++ NRA E A P + Sbjct: 217 QAVLKEREFLQTVIDGIADPIMAISTDYHVILANRAARESH---PEHALQPGPTLCYQLS 273 Query: 189 EFPADNRIRLQQ-----LLWKTARDQDEFLLLTRTG-EKIWIKASISPVYDVLAHLQNLV 242 Q + KT ++ E R G EK + SP+Y+ ++ ++ Sbjct: 274 HGSDTPCSDTNQKCPLCQVLKTGKEAREIHEHLRAGHEKRTYEIKASPLYNEDHSIRGII 333 Query: 243 MTFSDITE 250 T D+T+ Sbjct: 334 ETSRDLTD 341 >UniRef50_Q55576 Slr0359 protein n=2 Tax=Cyanobacteria RepID=Q55576_SYNY3 Length = 1244 Score = 751 bits (1941), Expect = 0.0, Method: Composition-based stats. Identities = 180/831 (21%), Positives = 358/831 (43%), Gaps = 71/831 (8%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP 67 A++ F + G +++++ + F NPAA +++ + E++ + D Sbjct: 424 RASEEFFSSMIVTITDGLLIVDQEGIIQFVNPAAREMFKRQEGELLQQPFGIPFVADQAT 483 Query: 68 AHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASV 127 E+ L DGS + +S + + +L +RD + Sbjct: 484 ----------------------EITLTPLDGSMVVAEMRVSPIHWQKGKAFLVSLRDITE 521 Query: 128 EMAQK----EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDT 183 + + E ++ V+ + +LD ++ N+ +M GY + E Sbjct: 522 QHQARLALAESEKKYRYIVELTSEGIWILDQDQQTTFANQQLADMLGYSVQEILEKNITA 581 Query: 184 LL----NIPEFPADNRIRLQ---QLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 + ++PE ++ LQ + + + R G +W S S YD Sbjct: 582 FVLVIHHLPESQNSHQKTLQSFPRCVLPNHGQVYDVQFQRRDGSVLWGLVSRSAWYDQWG 641 Query: 237 HLQNLVMTFSDITEER-----------QIRQLEGNILAAMCSSPPFHEMGEIICRNIESV 285 + + + +DIT+ + ++ + G+I + S+ + V Sbjct: 642 NYRGELAMLTDITKRKSAEQALSASEQRLEGILGSIQDVVWSADAVSFATLYLNPTTAMV 701 Query: 286 LNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETS 345 +S + +N W H + + + ++D L+ + Sbjct: 702 YGQSLEVCYQSQN----FWFEQVHPGDRLLLEYHLQLLMEKD---QTELEYRIVQPGGKE 754 Query: 346 AFIERVADISQH----------MAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLD 395 ++ R + + + + + E++ + + + D +T LPNR+ + L Sbjct: 755 RWLFRRSQLVRDGEHQPLRIDSIDSDITERKLAAEKLHYNANHDSLTNLPNRSMFLDRLG 814 Query: 396 DLVDKAVS-----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRI 450 + + + V + +D + + DSLG++ D L + +R R+ L+P+ L R+ Sbjct: 815 HALQRNLRRRDLRFAVLFLDLDGFKIINDSLGHSCGDLLLQGIAHRLRQCLRPEDTLARL 874 Query: 451 EGTQFV-LVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGK--NRDY 507 G +F L+ ++ +A + + KP ++ + SIGI+ + + Sbjct: 875 GGDEFTMLIENITCPEDVIAVAQRIHQELQKPFNLNGQEIFTNTSIGIALNHPHYGHPQD 934 Query: 508 LLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFA 567 +L A AM + G + F+ M+ +RL L+ AI +L+L YQP + Sbjct: 935 VLRDADTAMYRAKAAGKGRYAIFNQTMHHHAVQRLQRENDLRRAIDRQELQLHYQPIVCL 994 Query: 568 ETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN- 626 +TG+L G+EAL RW P G + P F+ +AEE G I +G W++ EA RQ+ E + Sbjct: 995 KTGQLQGVEALVRWQHPEEGLILPEEFVAIAEETGLIVPMGDWILWEASRQILELKQSFP 1054 Query: 627 -IHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQ 685 + +S+N+S+ R +L V + + + + L +EITES+++++ ++ Sbjct: 1055 QLSHLQVSINVSSRQLRDQRLLKTVDEILSSTNLAPQDLKLEITESLLIDNLNLAADVLK 1114 Query: 686 ILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQ 745 LR + +S+DDFGTG+S LS L P+ IK+D+SFV+ + A++ I ++ Sbjct: 1115 SLRQRNIQISLDDFGTGYSSLSYLHRFPINTIKVDRSFVNTMEPNNQNTAIVHTIVTLAH 1174 Query: 746 SLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLP 796 +L L V+AEG+ET+ L + C QGY+F+RP+P+E++ +++ +P Sbjct: 1175 TLGLDVIAEGIETERHLTQLHWLGCDAGQGYYFARPIPSEDLLDFLTIQIP 1225 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 64/400 (16%), Positives = 146/400 (36%), Gaps = 64/400 (16%) Query: 13 IFFPALEQNMMGAVLINE---NDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAH 69 + A++ + G ++ + ++ V++ N E + G+ REEVIG N L+ D + Sbjct: 297 LLQQAIDASSNGILITDALGSDNAVVYANQGFETITGFNREEVIGQNCRFLLNEDRQGEQ 356 Query: 70 PEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRDASV 127 + + R A + L+ +KDG+ W LS + + V ++ + D + Sbjct: 357 NKQLEKLRTA-IAHGQECEVVLKNYRKDGASFWNHLYLSPIYNQQNFLVNFIGIQTDVTQ 415 Query: 128 EMAQKEQTRQLIIAVDHL----DRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDT 183 + ++Q R + ++++D E I N A EMF E Sbjct: 416 QKLAEQQLRASEEFFSSMIVTITDGLLIVDQEGIIQFVNPAAREMFKRQEGELLQQPFGI 475 Query: 184 LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVM 243 + E L G + + +SP++ ++ Sbjct: 476 PFVADQ-------------------ATEITLTPLDGSMVVAEMRVSPIHWQKGK--AFLV 514 Query: 244 TFSDITEERQIRQLEGN------------------ILAAMCSSPPFHEMGEIICRNIESV 285 + DITE+ Q R + ++ ++ +++ +++ + Sbjct: 515 SLRDITEQHQARLALAESEKKYRYIVELTSEGIWILDQDQQTTFANQQLADMLGYSVQEI 574 Query: 286 LNESHVSLFALRNGMPIHWASSSHGAEIQ---------NAQSWSATIRQRDGAPAGILQI 336 L ++ + + + +P + +SH +Q + Q + ++RDG+ L Sbjct: 575 LEKNITAFVLVIHHLPE--SQNSHQKTLQSFPRCVLPNHGQVYDVQFQRRDGSVLWGLVS 632 Query: 337 KTSSGAETSAF---IERVADISQHMAALALEQEKSRQHIE 373 +++ + + + + DI++ +A S Q +E Sbjct: 633 RSAWYDQWGNYRGELAMLTDITKRKSAEQA-LSASEQRLE 671 Score = 94.3 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 96/261 (36%), Gaps = 10/261 (3%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDP---ERHIVQCNRAFTEMFGYCISEAS 177 ++ A +E+ L A+D +++ D + +V N+ F + G+ E Sbjct: 281 ILAAAIDRQEYEERLLLLQQAIDASSNGILITDALGSDNAVVYANQGFETITGFNREEVI 340 Query: 178 GMQPDTLLNIPEFPADNRI--RLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL 235 G LLN N+ +L+ + + + G W +SP+Y+ Sbjct: 341 GQNCRFLLNEDRQGEQNKQLEKLRTAIAHGQECEVVLKNYRKDGASFWNHLYLSPIYNQQ 400 Query: 236 AHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFA 295 L N + +D+T+++ + + + SS ++ + E ++ + + Sbjct: 401 NFLVNFIGIQTDVTQQK-LAEQQLRASEEFFSSMIVTITDGLLIVDQEGIIQFVNPAARE 459 Query: 296 LRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGA-PAGILQIKTSSGAETSAFIERVADI 354 + G Q+ T+ DG+ +++ + AF+ + DI Sbjct: 460 MFKRQEGELLQQPFGIPFVADQATEITLTPLDGSMVVAEMRVSPIHWQKGKAFLVSLRDI 519 Query: 355 S-QHMAALALEQEKSRQHIEQ 374 + QH A LAL +S + Sbjct: 520 TEQHQARLALA--ESEKKYRY 538 Score = 91.3 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 45/298 (15%), Positives = 100/298 (33%), Gaps = 21/298 (7%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI---- 61 A ++ + +E G +++++ + F N + GY +E++ NI + Sbjct: 528 ALAESEKKYRYIVELTSEGIWILDQDQQTTFANQQLADMLGYSVQEILEKNITAFVLVIH 587 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAE--GKVYYL 119 + + G ++Q +++DGS +W + S + L Sbjct: 588 HLPESQNSHQKTLQSFPRCVLPNHGQVYDVQFQRRDGSVLWGLVSRSAWYDQWGNYRGEL 647 Query: 120 ALVRDASVEMAQKEQT----RQLIIAVDHLDRPVIVLDP-ERHIVQCNRAFTEMFGYCIS 174 A++ D + + ++ ++L + + V D + N ++G + Sbjct: 648 AMLTDITKRKSAEQALSASEQRLEGILGSIQDVVWSADAVSFATLYLNPTTAMVYGQSLE 707 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQD--EFLLLTRTGEKIWIKASISPVY 232 Q P D + L +DQ E+ ++ G++ W+ V Sbjct: 708 --VCYQSQNFWFEQVHPGDRLLLEYHLQLLMEKDQTELEYRIVQPGGKERWLFRRSQLVR 765 Query: 233 DVLAHLQNLVMTFSDITEERQIRQLEG------NILAAMCSSPPFHEMGEIICRNIES 284 D + SDITE + + ++ S +G + RN+ Sbjct: 766 DGEHQPLRIDSIDSDITERKLAAEKLHYNANHDSLTNLPNRSMFLDRLGHALQRNLRR 823 >UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY13_9BACT Length = 857 Score = 751 bits (1940), Expect = 0.0, Method: Composition-based stats. Identities = 179/731 (24%), Positives = 323/731 (44%), Gaps = 76/731 (10%) Query: 128 EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI 187 E+ ++ ++ V+ L + +D + N A ++FGY E G L++ Sbjct: 130 ELELQDGKQRYKRLVEILPDIIYRIDANGYFTFINEAV-QVFGYEPDELIGKHFSELIHP 188 Query: 188 PEFPADNRIRLQQLLWKTARDQDE---FLLLTRTGEKIWIKASI---------------- 228 + +R + D RTG++ I Sbjct: 189 DDLKKVSRSEVLSEYSGKTSDYKTTPKLFDERRTGQRKTTGLQIRVKSKKSPEYMEYTIQ 248 Query: 229 ---------------------SPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCS 267 S + V DIT + ++ + A+ Sbjct: 249 IIKWPKKHEKIIEVAATGHYDSDIMKNDKRFVGTVGVIRDITGSKHAEEMICTLSLAVEQ 308 Query: 268 SPPFHEMGEIICR--------------NIESVLNESHVSLFALRNGMPIHWASSSHGAEI 313 SP + + R E VL ++ + + G + A + I Sbjct: 309 SPAMIAVTDTDGRIDYINPKFCKVTGFEPEEVLGKNLIDII-QPGGESLSMADKTLWKAI 367 Query: 314 QNAQSWSATI--RQRDGAPAGI---LQIKTSSGAETSAFIERVADISQHMAALALEQEKS 368 + W R++ G L S+ S ++ + DI+ E +++ Sbjct: 368 TSKGEWKEAFSSRKKHGELFWTSLSLSAIKSNEGFISHYLAIMEDIT--------EHKQA 419 Query: 369 RQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYA 424 + I L +D +T LPNR H+ L+ + A V I +D + V D+LG++ Sbjct: 420 EERIHYLAYYDSLTALPNRELFHDRLNMAIIHAHRKQQMLAVAFIDIDRFKKVNDTLGHS 479 Query: 425 WADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIM 483 D+ L + +R + ++ + + R G +FVL+ E + + + + + + +P++ Sbjct: 480 TGDRLLKIIADRLKSCIREEDTVSRQGGDEFVLLLTEISRMEDANDVTQRILKKLKEPVI 539 Query: 484 IDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKER 541 IDD ++ SIGI+ G + LL A +AM +++G + + F+S + E E+ Sbjct: 540 IDDHDLCISASIGIALYPGDGTTAEALLKNADSAMYISKESGRDNYHFYSSTVQEKAYEQ 599 Query: 542 LVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEI 601 L+ L+ A+ N +L L YQPQ+ TG L G+EAL RW P G + P+ FIPLAE+ Sbjct: 600 LLEEMYLRRALENRELVLYYQPQVNIATGRLVGMEALLRWKHPKKGLISPAEFIPLAEDT 659 Query: 602 GEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDG 661 G+I I WV+ AC+Q W+ + ++VN+S F L + V++ +H + Sbjct: 660 GQIVPIDFWVLHTACKQNMAWQRAGLPSVPIAVNISGHTFGRENLIDFVNNVLHDTRMSP 719 Query: 662 HQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDK 721 L +EITE + +++ ++ L+ +G+ +++DDFGTGFS LS L P+ ++KI Sbjct: 720 DALDLEITEGIAIQNLQTTIYKLNKLKSLGIQITIDDFGTGFSSLSYLSKFPIQKLKIGM 779 Query: 722 SFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRP 781 +F+ + A+++A+ ++ +SL LTV+AEGVET EQFE L+ + C QGY S+ Sbjct: 780 TFIHNLHKDPTNSAIVKAVIAMAKSLQLTVIAEGVETDEQFEFLQGLQCDEFQGYLCSKA 839 Query: 782 LPAEEIPGWMS 792 + +EE+ +++ Sbjct: 840 VTSEEMGRFLA 850 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 104/313 (33%), Gaps = 46/313 (14%) Query: 10 ADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAH 69 + +E I+ N F N A +++GY+ +E+IG + LI D Sbjct: 136 GKQRYKRLVEILPDIIYRIDANGYFTFINEAV-QVFGYEPDELIGKHFSELIHPDDLKKV 194 Query: 70 PEYIRHNREGGKARVEGMSRELQLEKKDGSKI---------------WTRFALSKVSAEG 114 + GK + +L E++ G + + + + + Sbjct: 195 SRSEVLSEYSGKTSDYKTTPKLFDERRTGQRKTTGLQIRVKSKKSPEYMEYTIQIIKWPK 254 Query: 115 K------------------------VYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVI 150 K V + ++RD + +E L +AV+ + Sbjct: 255 KHEKIIEVAATGHYDSDIMKNDKRFVGTVGVIRDITGSKHAEEMICTLSLAVEQSPAMIA 314 Query: 151 VLDPERHIVQCNRAFTEMFGYCISEASGMQP-DTLLNIPEFPADNRIRLQQLLWKTARDQ 209 V D + I N F ++ G+ E G D + E + L + + + Sbjct: 315 VTDTDGRIDYINPKFCKVTGFEPEEVLGKNLIDIIQPGGESLSMADKTLWKAITSKGEWK 374 Query: 210 DEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNI-----LAA 264 + F + GE W S+S + + + + DITE +Q + + L A Sbjct: 375 EAFSSRKKHGELFWTSLSLSAIKSNEGFISHYLAIMEDITEHKQAEERIHYLAYYDSLTA 434 Query: 265 MCSSPPFHEMGEI 277 + + FH+ + Sbjct: 435 LPNRELFHDRLNM 447 Score = 76.2 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 93/231 (40%), Gaps = 24/231 (10%) Query: 3 LTDADNAADGI--FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNI-DM 59 +T + +A + I A+EQ+ + + + + + NP K+ G++ EEV+G N+ D+ Sbjct: 289 ITGSKHAEEMICTLSLAVEQSPAMIAVTDTDGRIDYINPKFCKVTGFEPEEVLGKNLIDI 348 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VY 117 + P + + K KK G WT +LS + + + Sbjct: 349 IQPGGESLSMADKTLWKAITSKGE---WKEAFSSRKKHGELFWTSLSLSAIKSNEGFISH 405 Query: 118 YLALVRDASVEMAQKEQTRQLI------------IAVDHLDRPVIVLDPERHIVQCNRAF 165 YLA++ D + +E+ L + D L+ +I ++ ++ AF Sbjct: 406 YLAIMEDITEHKQAEERIHYLAYYDSLTALPNRELFHDRLNMAIIHAHRKQQMLAV--AF 463 Query: 166 TEMFGY-CISEASGMQP-DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLL 214 ++ + +++ G D LL I + IR + + + D+ LL Sbjct: 464 IDIDRFKKVNDTLGHSTGDRLLKIIADRLKSCIREEDTVSRQGGDEFVLLL 514 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 751 bits (1940), Expect = 0.0, Method: Composition-based stats. Identities = 200/704 (28%), Positives = 318/704 (45%), Gaps = 45/704 (6%) Query: 130 AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE 189 + Q R +VDH ++ +D + N + G+ E G + P Sbjct: 331 HSERQLRLTQYSVDHGVDLILWVDLNSRVRYANLRAQKQLGWHPHELYGRPLSRI--APS 388 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 + LQQ + + E R G+ + ++ + S + L + D++ Sbjct: 389 LGGAAWMSLQQRIARGDNVTLETSFSCRNGQTLAVEVTASVLTHTEGD-GLLCLIARDVS 447 Query: 250 EERQIRQLEGNI-----LAAMCSSPPFHEM-----GEIICRNIESVLNESHVSLFALRNG 299 E +Q N LA S +E+ I I L+ + Sbjct: 448 ELKQAAAALANSDARLRLALQASGTGLYELELATGAITITGAIRQRLDIRVPEQQPIPAA 507 Query: 300 MPIHWASSSHGAEIQNA-QSWSATIRQRD------------GAPAGILQ----IKTSSGA 342 + + W A I+ A + W D G + I + Sbjct: 508 LWLAWVHPDDQARIRQAFEHWQQEPHAPDRLETSFRVCPPGGRMRWVHARGQYIAAAEDT 567 Query: 343 ETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV---- 398 + + V D++ +Q+++ + IE+ FD +TGL NR+ L+ L + Sbjct: 568 AAARLVGTVNDVT--------DQKENEEQIERYAHFDALTGLANRHALYRRLGQAITSVH 619 Query: 399 DKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV 458 V + +D + + D+LG+A D L EV R + PD L R+ G +F+LV Sbjct: 620 QHQHPLAVLFVDLDKFKTINDTLGHAVGDVVLREVAGRLSDFAGPDDILARLGGDEFLLV 679 Query: 459 SLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAM 516 D +++A + +S P+ +D + P T +IG+S G+ D L+ A AM Sbjct: 680 LPGADERAASEVAACILTAMSVPVRVDGRELPTTPTIGVSLYPRDGEEADDLIRNADIAM 739 Query: 517 DYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIE 576 + G N +Q ++P MN ERL L L+ A ++ L YQPQI G + G E Sbjct: 740 YQAKARGRNTFQLYTPDMNAAAAERLQLQGELRNAHLRGEIMLHYQPQIDVTDGHVVGCE 799 Query: 577 ALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNL 636 AL RW P G V P RFIPLAEE G I +G W I EACRQ W+ + ++VNL Sbjct: 800 ALMRWKHPTLGMVSPGRFIPLAEESGLIITLGNWAIREACRQAMVWQRAGLPPLTVAVNL 859 Query: 637 SALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSV 696 S F+ + V+DA+ + L +E+TES++M ++ + L+ +GV LS+ Sbjct: 860 SGCQFQQSNFTAVVADALADTSLPPQYLELELTESIVMHDVEQVIATLTELKALGVQLSI 919 Query: 697 DDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGV 756 DDFGTG+S L+ L PV +KID+ FV T+ A++ AI ++G+ LNL ++AEGV Sbjct: 920 DDFGTGYSSLNYLKRFPVDLLKIDQGFVRDVETDPSDAAIVRAIIALGKILNLRLIAEGV 979 Query: 757 ETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM-SSVLPLKI 799 ET+ Q + L IQGY+FSRPLPAE++ ++ +LP+ + Sbjct: 980 ETQGQLDYLHAAGVDFIQGYYFSRPLPAEDMATYLAQRLLPVSL 1023 Score = 67.8 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 96/297 (32%), Gaps = 18/297 (6%) Query: 15 FPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIR 74 +++ + + ++ N V + N A+K G+ E+ G + + P A Sbjct: 340 QYSVDHGVDLILWVDLNSRVRYANLRAQKQLGWHPHELYGRPLSRIAPSLGGAAW----- 394 Query: 75 HNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS-AEGKVYYLALVRDASVEMAQKE 133 + + AR + ++ E ++G + S ++ EG + RD S Sbjct: 395 MSLQQRIARGDNVTLETSFSCRNGQTLAVEVTASVLTHTEGDGLLCLIARDVSELKQAAA 454 Query: 134 QTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE 189 +L +A+ + L+ + A + + E + L Sbjct: 455 ALANSDARLRLALQASGTGLYELELATGAITITGAIRQRLDIRVPEQQPIPAALWLAWVH 514 Query: 190 FPADNRIR-----LQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV-YDVLAHLQNLVM 243 RIR QQ R + F + G W+ A + LV Sbjct: 515 PDDQARIRQAFEHWQQEPHAPDRLETSFRVCPPGGRMRWVHARGQYIAAAEDTAAARLVG 574 Query: 244 TFSDITEERQIRQLEGNI--LAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRN 298 T +D+T++++ + A+ H + + + I SV H + Sbjct: 575 TVNDVTDQKENEEQIERYAHFDALTGLANRHALYRRLGQAITSVHQHQHPLAVLFVD 631 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 751 bits (1940), Expect = 0.0, Method: Composition-based stats. Identities = 176/574 (30%), Positives = 281/574 (48%), Gaps = 32/574 (5%) Query: 232 YDVLAHLQNLVMTFSDITEERQIRQLEGNIL--AAMCSSPPFHEMGEIICRNIESVLNES 289 ++ LQ F+ +E + +I+ + + + E + RN + + + Sbjct: 487 FEKEEQLQLSAQIFAQSSEGIMLLDPNCHIVMVNSAFTHITGYSEEETLGRNPKMLASGQ 546 Query: 290 HVSLFALRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG---ILQIKTSSGAET 344 H F ++ I+ W + R++DG+ ++Q S Sbjct: 547 HDRNF-----------YATMWEAIETEGRWQGEVWNRRKDGSLYPEWLLIQTMRDSRGTL 595 Query: 345 SAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS- 403 + +I D++ E++++ + ++ L FDP+TGLPNR LH + + A Sbjct: 596 THYIGTFTDLT--------ERKETEERVQWLAHFDPLTGLPNRTLLHIRSNLAISLAQRR 647 Query: 404 ---PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL 460 + + +D+ ++V DSLG+ D+ L + R ++ + R+ G +FVLV Sbjct: 648 HEPLALMFLDLDNFKNVNDSLGHGVGDELLKQFSQRLVNAVREQDTISRLGGDEFVLVLP 707 Query: 461 ENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDY 518 D +A+ L N+ ++ I+ LT+SIGI+ G + D L +A AM Sbjct: 708 GTDTDGAAYLAERLLNIAARQYNIERHEINLTVSIGIAMYPTDGTDFDTLWRSADAAMYR 767 Query: 519 IRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEAL 578 +++G N + FF+ M L + AL+ A+ NQ LVYQPQ+ T + G EAL Sbjct: 768 AKQSGRNDYCFFTTEMQARSARTLQIDNALRRALERNQFSLVYQPQLSLNTNRIVGFEAL 827 Query: 579 ARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSA 638 RW P G+ PP FIP+AE G+I IG WV+ A RQL W+ + +SVNLSA Sbjct: 828 IRWTHPQFGNTPPDEFIPIAESNGQIIPIGEWVLKTAVRQLRLWQDNGLKDVTISVNLSA 887 Query: 639 LHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDD 698 + FR +LP V + G+ L +E+TE + ME+ I LR G+ +S+DD Sbjct: 888 VQFRHPRLPELVMAILEEAGVSPECLQLELTEGVAMENPLAAITVIDELRKKGIRISIDD 947 Query: 699 FGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVET 758 FGTG+S L+ L V +KID+SFV + +A++ A+ S+ SL + VAEGVET Sbjct: 948 FGTGYSSLTYLKRFNVYSLKIDRSFVQDLPNDTEDMAIVSAVISLADSLGMITVAEGVET 1007 Query: 759 KEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 KEQ E LR C IQGY+ SRPL A+ + ++ Sbjct: 1008 KEQLEFLRSRGCTEIQGYYLSRPLQADAVFSFIE 1041 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 78/211 (36%), Gaps = 8/211 (3%) Query: 54 GNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--- 110 G + P ++ E + + + S + ++G+ I F S V Sbjct: 405 GQVVRENKPIWMQDFLHEPAMKHWQKHIEHFKWRSSAILPLHRNGNVIGVMFFYSNVLNA 464 Query: 111 -SAEGKVYYLALVRDASVEMA---QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFT 166 + + L LV D + ++EQ + +++LDP HIV N AFT Sbjct: 465 FTESSQRLLLELVEDIDFALEHFEKEEQLQLSAQIFAQSSEGIMLLDPNCHIVMVNSAFT 524 Query: 167 EMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKA 226 + GY E G P L + + + + + + R Q E + G Sbjct: 525 HITGYSEEETLGRNPKMLASG-QHDRNFYATMWEAIETEGRWQGEVWNRRKDGSLYPEWL 583 Query: 227 SISPVYDVLAHLQNLVMTFSDITEERQIRQL 257 I + D L + + TF+D+TE ++ + Sbjct: 584 LIQTMRDSRGTLTHYIGTFTDLTERKETEER 614 Score = 66.6 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 43/128 (33%), Gaps = 6/128 (4%) Query: 16 PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRH 75 Q+ G +L++ N ++ N A + GY EE +G N ML H Sbjct: 498 QIFAQSSEGIMLLDPNCHIVMVNSAFTHITGYSEEETLGRNPKMLASGQ----HDRNFYA 553 Query: 76 NREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYLALVRDASVEMAQKE 133 E+ +KDGS W + S +Y+ D + +E Sbjct: 554 TMWEAIETEGRWQGEVWNRRKDGSLYPEWLLIQTMRDSRGTLTHYIGTFTDLTERKETEE 613 Query: 134 QTRQLIIA 141 + + L Sbjct: 614 RVQWLAHF 621 Score = 50.8 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 42/145 (28%), Gaps = 11/145 (7%) Query: 157 HIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLT 216 + N E+FGY E G + L +NR ++E Sbjct: 10 KWIHFNDKLCEIFGYTPEEF-GKKGWNELCDTPCAEENRGIESLKRGDIDEFREEKAFRR 68 Query: 217 RTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNIL----------AAMC 266 + G + V LV+T DITE ++ + + A+ Sbjct: 69 KNGRNAIAEVHFRCVAKDDGAPDYLVVTVEDITERKKAQTEIYRLSQLYATLSHCNQAIV 128 Query: 267 SSPPFHEMGEIICRNIESVLNESHV 291 S E+ + IC I Sbjct: 129 HSKTEKELFQQICYGIVHYSGRRFT 153 Score = 47.3 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 9/124 (7%) Query: 32 DEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSREL 91 D+ + FN +++GY EE + L E R + ++ E Sbjct: 9 DKWIHFNDKLCEIFGYTPEEFGKKGWNEL----CDTPCAEENRGIESLKRGDIDEFREEK 64 Query: 92 QLEKKDGSKIWTRFALSKVSAEGKV--YYLALVRDASVEMAQKEQTRQLIIA---VDHLD 146 +K+G V+ + Y + V D + + + +L + H + Sbjct: 65 AFRRKNGRNAIAEVHFRCVAKDDGAPDYLVVTVEDITERKKAQTEIYRLSQLYATLSHCN 124 Query: 147 RPVI 150 + ++ Sbjct: 125 QAIV 128 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 750 bits (1937), Expect = 0.0, Method: Composition-based stats. Identities = 186/712 (26%), Positives = 321/712 (45%), Gaps = 40/712 (5%) Query: 109 KVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEM 168 ++S++ K+ R + +E ++L + + V+D +V+ N+A M Sbjct: 308 RLSSQQKLIVRHAQRLQATSNDLQESEKRLRTIFETEPECIKVVDRNGELVEMNQAGLAM 367 Query: 169 FGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASI 228 E + + PE A ++++ EF + G ++ Sbjct: 368 LEAATLEEARQKKLIDYVAPEDQAAFLALHRRVM-NGESAVLEFKITGLKGTLHHLETHA 426 Query: 229 SPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIIC------RNI 282 +P+ D ++ L+ D+T + + I A S + + + + Sbjct: 427 TPMPDANGNISLLLGITRDVT-ASMHAKQQLRIAATAFESQEGMLVTDAVGAILRVNQAF 485 Query: 283 ESVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG--- 332 + + + L +G + I+ W I R+++G Sbjct: 486 TRITGYTADEVIGKNPRILNSGRHDAYFYKEMWERIKRTGEWEGEIWNRRKNGDVYPEHL 545 Query: 333 ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHN 392 + +G ++ + DI+ + S + I L FDP+T LPNR L + Sbjct: 546 TITAVKDAGGNVVNYVATLMDITAS--------KASEEEIRNLAFFDPLTRLPNRRLLQD 597 Query: 393 YLDDLV----DKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLC 448 L + S + I +D+ +++ D+LG+ D L +V R ++ + Sbjct: 598 RLQQALASCGRSGKSGAILFIDLDNFKNLNDTLGHDIGDLLLEKVAIRLSSCVREGDTVA 657 Query: 449 RIEGTQFVLVSLE------NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--D 500 RI G +FV++ + + + ++ ++ P + + + SIG + D Sbjct: 658 RIGGDEFVVMLEDLSDNILDAAEQTESVGSKILASLNVPYQLGIHTYDNSPSIGATLFND 717 Query: 501 LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLV 560 + D LL A AM +K G N +FF P M + + RL L L++AI +Q +L Sbjct: 718 NHNSIDELLKQADIAMYQAKKAGRNTMRFFDPRMQQSLSARLALELELRKAIEKDQFQLY 777 Query: 561 YQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLA 620 YQ Q+ ET G EAL RW P HG + P+ FIP+AEE G I IG WV+ AC QL Sbjct: 778 YQIQVD-ETHRPLGAEALLRWMHPEHGLMAPAEFIPMAEETGLIVPIGWWVLETACTQLK 836 Query: 621 EWRSQNI-HIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTE 679 W + LS+N+SA F +QV A+ +GID L +E+TES+++E+ Sbjct: 837 AWEKDPLTRNLVLSINVSAKQFHQPDFVDQVQAAVDHYGIDPALLKLELTESILLENVDT 896 Query: 680 IFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEA 739 KR+ L+ GVG S+DDFGTG+S L L LP+ ++KID+SF+ ++ +A++ Sbjct: 897 TIKRMSALKKTGVGFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFMQEITSDSSDMAIVST 956 Query: 740 ITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 I ++ QS+ + V+AEGVET+EQ ++L + C QGY FS+P+P E+ + Sbjct: 957 IIAMAQSMQMGVIAEGVETEEQRQLLLRKGCNHFQGYLFSKPVPVEQFEKLL 1008 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 95/257 (36%), Gaps = 10/257 (3%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLW-GYKREEVIGNNIDMLIPRDLR 66 ++ E +++ N E++ N A + EE + + + + Sbjct: 331 QESEKRLRTIFETEPECIKVVDRNGELVEMNQAGLAMLEAATLEEARQKKLIDYVAPEDQ 390 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKV-YYLALVRD 124 A R G A + E ++ G+ + + A G + L + RD Sbjct: 391 AAFLALHRRVMNGESAVL-----EFKITGLKGTLHHLETHATPMPDANGNISLLLGITRD 445 Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 + M K+Q R A + ++V D I++ N+AFT + GY E G P + Sbjct: 446 VTASMHAKQQLRIAATAFE-SQEGMLVTDAVGAILRVNQAFTRITGYTADEVIGKNP-RI 503 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 LN A + + + +T + E + G+ +I+ V D ++ N V T Sbjct: 504 LNSGRHDAYFYKEMWERIKRTGEWEGEIWNRRKNGDVYPEHLTITAVKDAGGNVVNYVAT 563 Query: 245 FSDITEERQIRQLEGNI 261 DIT + + N+ Sbjct: 564 LMDITASKASEEEIRNL 580 Score = 71.6 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 54/142 (38%), Gaps = 7/142 (4%) Query: 3 LTDADNAADGI-FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 +T + +A + ++ G ++ + ++ N A ++ GY +EVIG N +L Sbjct: 446 VTASMHAKQQLRIAATAFESQEGMLVTDAVGAILRVNQAFTRITGYTADEVIGKNPRILN 505 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYL 119 H Y R E+ +K+G ++ V G V Y+ Sbjct: 506 SGR----HDAYFYKEMWERIKRTGEWEGEIWNRRKNGDVYPEHLTITAVKDAGGNVVNYV 561 Query: 120 ALVRDASVEMAQKEQTRQLIIA 141 A + D + A +E+ R L Sbjct: 562 ATLMDITASKASEEEIRNLAFF 583 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 750 bits (1937), Expect = 0.0, Method: Composition-based stats. Identities = 180/691 (26%), Positives = 313/691 (45%), Gaps = 37/691 (5%) Query: 128 EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI 187 E E +++L + D + + CN + F + G L+ + Sbjct: 131 ETELLESNLMFRTFMENLPGAAFIKDQDGRYLYCNHGLDKAFNVEKGCSIGKLDTELVPL 190 Query: 188 PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSD 247 + + L TA + E + + +G W+ + P+ + Q++ D Sbjct: 191 EVAYKLREMEARVLKAGTALQELEVMSM-PSGASYWLS-TKFPLVGENSDSQHVGGIAID 248 Query: 248 ITEERQIRQLEG-NILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIH--- 303 ITE ++ Q A P + +N + ++ + I Sbjct: 249 ITERMKVEQDLLLRTRAIEACVNPIVIVDTATPGMPLIYVNGAFETITGYSSEEAIGRNC 308 Query: 304 ----------WASSSHGAEIQNAQSWSATIR--QRDGA----PAGILQIKTSSGAETSAF 347 A I+ + S +R +DG+ I + +SG F Sbjct: 309 KFLQGMDTDQPELGKLRAAIREQRPASVLLRNYHKDGSMFLNELYIAPVSDTSGGAVGHF 368 Query: 348 IERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP--- 404 + + D++Q ++ ++ +E +D +TGL NRN L+ + +A Sbjct: 369 VGVLYDVTQI--------KRYQEDLEHQANYDTLTGLANRNLLNERTQQALLQARRHDHF 420 Query: 405 -VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEND 463 + I +D+ + V DS+G+ D+ + V +R + ++ + RI G +FVL+ Sbjct: 421 LSLVFIDLDNFKLVNDSMGHGAGDELIANVGSRLQTCVRDGDTVARIGGDEFVLLLTNQS 480 Query: 464 VSNI-TQIADELRNVVSKPIMIDDKPFPLTLSIGIS--YDLGKNRDYLLSTAHNAMDYIR 520 VS+ + ++ + KP+ I + +T S+G++ + G++ + LL+ A AM + Sbjct: 481 VSDSNAGVMQRIQAELIKPMWIRGQEIVVTCSMGVARFPEDGEDSESLLANADTAMYRAK 540 Query: 521 KNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALAR 580 +G N +QF++ MN ERL L + L A+ N++L LVYQPQI G + G+EAL R Sbjct: 541 SSGRNNFQFYTKEMNATSGERLSLESDLWHALKNDELFLVYQPQIDLRDGTVIGMEALIR 600 Query: 581 WHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALH 640 W P G + P FIP+AE G I IG WV+ ACR + + + + +++NLSA Sbjct: 601 WQHPKRGLIAPMDFIPMAECNGLIIPIGIWVLETACRHNLQLQKEGLPPIRVAINLSARQ 660 Query: 641 FRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFG 700 V + A G+D H L +E+TESM+M + ++ + L MG+ LS+DDFG Sbjct: 661 LSDRNFVESVQSVIEAIGLDPHYLELEVTESMVMHNVEDVVVTLNDLNKMGIQLSLDDFG 720 Query: 701 TGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKE 760 TGFS L+ L P+ +KID+SF+ C ++ + + I ++ L + V+AEGVE E Sbjct: 721 TGFSSLAYLKRFPIDRLKIDQSFIFNCDSDPGDAIIAQTIIALAHGLKIKVIAEGVEKSE 780 Query: 761 QFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 L+K C QGYF SRPL +++ ++ Sbjct: 781 HLSFLKKNGCDEGQGYFISRPLTFDDLRMFL 811 Score = 96.7 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 93/258 (36%), Gaps = 12/258 (4%) Query: 9 AADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPA 68 ++ +F +E A + +++ ++ N +K + ++ G +I L +L P Sbjct: 136 ESNLMFRTFMENLPGAAFIKDQDGRYLYCNHGLDKAFNVEK----GCSIGKL-DTELVPL 190 Query: 69 HPEYIRHNREGGKARVEGMSRELQL-EKKDGSKIWTRFALSKVSAE-GKVYYLALVRDAS 126 Y E + +EL++ G+ W V + + D + Sbjct: 191 EVAYKLREMEARVLKAGTALQELEVMSMPSGASYWLSTKFPLVGENSDSQHVGGIAIDIT 250 Query: 127 VEMAQKEQTRQLIIAVDHLDRPVIVLD---PERHIVQCNRAFTEMFGYCISEASGMQPDT 183 M ++ A++ P++++D P ++ N AF + GY EA G Sbjct: 251 ERMKVEQDLLLRTRAIEACVNPIVIVDTATPGMPLIYVNGAFETITGYSSEEAIGRNCK- 309 Query: 184 LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH-LQNLV 242 L + +L+ + + + G + I+PV D + + V Sbjct: 310 FLQGMDTDQPELGKLRAAIREQRPASVLLRNYHKDGSMFLNELYIAPVSDTSGGAVGHFV 369 Query: 243 MTFSDITEERQIRQLEGN 260 D+T+ ++ ++ + Sbjct: 370 GVLYDVTQIKRYQEDLEH 387 Score = 57.7 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 52/149 (34%), Gaps = 12/149 (8%) Query: 1 MKLTDADNAADGIFFP--ALEQNMMGAVLIN---ENDEVMFFNPAAEKLWGYKREEVIGN 55 + +T+ + A+E + V+++ +++ N A E + GY EE IG Sbjct: 247 IDITERMKVEQDLLLRTRAIEACVNPIVIVDTATPGMPLIYVNGAFETITGYSSEEAIGR 306 Query: 56 NIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA--- 112 N L D +R + S L+ KDGS ++ VS Sbjct: 307 NCKFLQGMDTDQPELGKLRAAIREQRPA----SVLLRNYHKDGSMFLNELYIAPVSDTSG 362 Query: 113 EGKVYYLALVRDASVEMAQKEQTRQLIIA 141 +++ ++ D + +E Sbjct: 363 GAVGHFVGVLYDVTQIKRYQEDLEHQANY 391 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 749 bits (1936), Expect = 0.0, Method: Composition-based stats. Identities = 198/761 (26%), Positives = 335/761 (44%), Gaps = 62/761 (8%) Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLAL----VRDASVE 128 + E GK+ E ++R +LE + G+ S V E +V+ + L Sbjct: 1 MDGYGEDGKSSDELIARIRELEARLGALRAAPDTSSLVE-ELRVHQIELEAQNRELIEAR 59 Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM--------- 179 A ++ + D + LD I++ N + G ++ GM Sbjct: 60 RALEDARDRYSDLYDFAPVGYMTLDEHGVILEINLTGARLLGQDRAQVIGMPLSGWVPNG 119 Query: 180 -------QPDTLLNIPEFPADNRIRLQQLLWKTA--RDQDEFLLLTRTGEKIWIKASISP 230 +L+ P D+ L+ ++ + E + T+ G + ++ Sbjct: 120 AVAQLFHHLRRVLSEPGRVFDHLPLHTSLVRESPIRHVRLESIAFTQYGSGRLCRTALVD 179 Query: 231 VYD---VLAHLQNLVMTFSDITEERQIRQLEGNILAA--MCSSPPFHEMGEIICRNIESV 285 + D L + F T+ I I++ ++ + E++ RN + + Sbjct: 180 LSDRKREEDRLNLIAQVFERSTDAIMITDSLNRIVSVNRAFTTVTGYSADEVLGRNPKLL 239 Query: 286 LNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGA----PAGILQIKTS 339 + H F + I+ SWS I R+++G I ++ Sbjct: 240 ASGRHDRDF-----------YREMWSAIERNGSWSGEISNRRKNGEIYNEWLTIHAVRNE 288 Query: 340 SGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD 399 SG I A+I+ +Q + I+ L +DP+T LPNR L + + + Sbjct: 289 SGG-IENCIAIYAEIT--------DQRAAASRIQFLAHYDPLTLLPNRALLQDRMHQGLA 339 Query: 400 KA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF 455 A V + +D + + DSLG+ D L EV R + ++ D + R G +F Sbjct: 340 HAAREGTRAAVLFLDLDRFKTINDSLGHLVGDHLLQEVAQRLKASVREDDTVARRGGDEF 399 Query: 456 VLVSLEND-VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTA 512 +++ D +A ++ + + I ++ ++ SIGIS D + D L+ A Sbjct: 400 IVMLPHVDSAEQAAHVAGKIIEAMEQTIPVNGYVLNVSFSIGISVFPDDAMDPDTLIRNA 459 Query: 513 HNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGEL 572 AM + +G N +QFF+ MN ERL L L A+ + +L++QPQ +G + Sbjct: 460 DIAMYRSKASGRNQFQFFTADMNAHALERLALENDLHRAVERGEFRLMFQPQFE-GSGSI 518 Query: 573 YGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPAL 632 G EAL RW P G V P+ FIP+AEE G I IG WV+ AC+Q+ WR + + Sbjct: 519 IGAEALLRWQHPQRGLVTPAEFIPVAEETGLIVPIGTWVLERACQQVRAWRDAGLKKITV 578 Query: 633 SVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGV 692 SVN+SAL F L + + I+ L +E+TES++M + L++MGV Sbjct: 579 SVNISALQFSQKNLLELIRRLLAVSNIEPGTLELELTESVLMHDHVATSGLMSELKEMGV 638 Query: 693 GLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVV 752 +++DDFGTG+S LS L S P++++KID+SFV A+ AI + ++LN+ V+ Sbjct: 639 RMAIDDFGTGYSSLSYLRSFPISKLKIDQSFVRDLSDGGDAGAITGAIIGLAKNLNMRVI 698 Query: 753 AEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 AEGVET +Q L+ C QG+FFS+P+ E+ + + Sbjct: 699 AEGVETAQQASFLQAQCCDEFQGHFFSQPVSPEKFAELLRA 739 Score = 130 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 92/257 (35%), Gaps = 3/257 (1%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A A + + +G + ++E+ ++ N +L G R +VIG + +P Sbjct: 61 ALEDARDRYSDLYDFAPVGYMTLDEHGVILEINLTGARLLGQDRAQVIGMPLSGWVPNGA 120 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDG-SKIWTRFALSKVSAEGKVYYLALVRD 124 ++R + + L ++ + G++ ALV D Sbjct: 121 VAQLFHHLRRVLSEPGRVFDHLPLHTSLVRESPIRHVRLESIAFTQYGSGRLCRTALV-D 179 Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 S ++++ + + +++ D IV NRAFT + GY E G P L Sbjct: 180 LSDRKREEDRLNLIAQVFERSTDAIMITDSLNRIVSVNRAFTTVTGYSADEVLGRNPK-L 238 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 L D + + + E + GE +I V + ++N + Sbjct: 239 LASGRHDRDFYREMWSAIERNGSWSGEISNRRKNGEIYNEWLTIHAVRNESGGIENCIAI 298 Query: 245 FSDITEERQIRQLEGNI 261 +++IT++R + Sbjct: 299 YAEITDQRAAASRIQFL 315 Score = 70.8 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 50/143 (34%), Gaps = 8/143 (5%) Query: 3 LTDADNAAD--GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 L+D D + E++ ++ + + ++ N A + GY +EV+G N +L Sbjct: 180 LSDRKREEDRLNLIAQVFERSTDAIMITDSLNRIVSVNRAFTTVTGYSADEVLGRNPKLL 239 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYY 118 H R S E+ +K+G W + + G Sbjct: 240 ASGR----HDRDFYREMWSAIERNGSWSGEISNRRKNGEIYNEWLTIHAVRNESGGIENC 295 Query: 119 LALVRDASVEMAQKEQTRQLIIA 141 +A+ + + + A + + L Sbjct: 296 IAIYAEITDQRAAASRIQFLAHY 318 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 749 bits (1936), Expect = 0.0, Method: Composition-based stats. Identities = 198/716 (27%), Positives = 332/716 (46%), Gaps = 45/716 (6%) Query: 116 VYYLALVRDASVEMAQKEQTRQ-LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYC-- 172 ++ + + ++ Q EQ Q L A D ++ + ++ + G Sbjct: 566 AQWVGWEKYRAQQLKQLEQIHQDLENAQSVAKIGSWHWDMQKDNLHWSKELVRLLGLEGD 625 Query: 173 ISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLL---TRTGEKIWIKASIS 229 S AS L++ + NR + + +D+ E ++GE + I A Sbjct: 626 TSHASYSTYLELIHPDDRAKINRQM--AAVTRGMQDRFEADHRIICHKSGELLHIHALGI 683 Query: 230 PVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEM------GEIICRNI- 282 D +V T D+T + EG +LA M + G+I N Sbjct: 684 VSRDSRGVPSQMVGTLQDVTRRKMAE--EGLVLAKMIFDNAGEAIVITDAQGDITDVNPA 741 Query: 283 -ESVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGA----P 330 + ++ + + L++G E+ + W I R++ G Sbjct: 742 YQRIMGYTRDEIVGQNPSILKSGRHDEQFYEQMWNEMLSEGHWQGEIWDRRKSGEIFPKW 801 Query: 331 AGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNL 390 I I+ G S F+ DI+Q Q+++ + +E+L +DP+T LPNR Sbjct: 802 LTIDAIRDEQGV-ISNFVGLFMDITQ--------QKETEEQLEKLAYYDPLTELPNRALF 852 Query: 391 HNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQY 446 + L+ + + ++ I +D + V DSLG+ D L++V R + L+ Sbjct: 853 RDRLEQEMRLSARGGKSLGLFFIDLDRFKYVNDSLGHDKGDDLLIQVAGRIKHHLRTSDT 912 Query: 447 LCRIEGTQF-VLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGK 503 + R+ G +F V++ +++ +IA + + + ++ + SIGI+ D G+ Sbjct: 913 VARLGGDEFTVILPGIEQTNDVARIAGAIVKSLGEVFVLQGHEVFIGGSIGIAMHPDDGE 972 Query: 504 NRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQP 563 + + L A AM ++ G ++FF+ MNE+ RL L AL++A+ NQL L YQP Sbjct: 973 DYETLTKHADTAMYRAKEEGRGTYKFFTSDMNEINGRRLSLERALRQAVECNQLTLHYQP 1032 Query: 564 QIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWR 623 ++ + + G+EAL RW+ P G V P FIP+AEE G I IG WV+ +AC Sbjct: 1033 KVDVKQCRITGMEALVRWNHPEQGLVSPVDFIPIAEETGLIITIGEWVMQQACMDAKRLA 1092 Query: 624 SQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKR 683 + H +++NLSA F+ L ++ ++ G+ L VEITES+ M ++ Sbjct: 1093 RSSRHPLQVAINLSAKQFQDALLVAKLERSLQQSGLAPELLEVEITESLAMGDVNRTIEQ 1152 Query: 684 IQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSI 743 I LR +GV +S+DDFGTG+S LS L LP+ +KIDKSF+ + A++ +I S+ Sbjct: 1153 IGELRALGVKVSIDDFGTGYSSLSYLKKLPLNALKIDKSFIQDLYLDSDDTAIVSSILSM 1212 Query: 744 GQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI 799 +L L+VVAEGVE + Q L + C IQGYFFS+PLP E ++ P+K+ Sbjct: 1213 ASALGLSVVAEGVENQAQIHFLCEKECPTIQGYFFSKPLPFEAFEKFLLDWDPVKM 1268 Score = 121 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 84/243 (34%), Gaps = 7/243 (2%) Query: 23 MGAVLINENDEVMFFNPAAEKLWGYK--REEVIGNNIDMLIPRDLRPAHPEYIRHNREGG 80 +G+ + + + ++ +L G + + LI D R + G Sbjct: 598 IGSWHWDMQKDNLHWSKELVRLLGLEGDTSHASYSTYLELIHPDDRAKINRQMAAVTRGM 657 Query: 81 KARVEGMSRELQLEKKDGSKIWTR--FALSKVSAEGKVYYLALVRDASVEMAQKEQTRQL 138 + R E R + K G + +S+ S + ++D + +E Sbjct: 658 QDRFEADHRIIC--HKSGELLHIHALGIVSRDSRGVPSQMVGTLQDVTRRKMAEEGLVLA 715 Query: 139 IIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRL 198 + D+ +++ D + I N A+ + GY E G P +L ++ Sbjct: 716 KMIFDNAGEAIVITDAQGDITDVNPAYQRIMGYTRDEIVGQNPS-ILKSGRHDEQFYEQM 774 Query: 199 QQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLE 258 + Q E ++GE +I + D + N V F DIT++++ + Sbjct: 775 WNEMLSEGHWQGEIWDRRKSGEIFPKWLTIDAIRDEQGVISNFVGLFMDITQQKETEEQL 834 Query: 259 GNI 261 + Sbjct: 835 EKL 837 Score = 76.6 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 79/228 (34%), Gaps = 20/228 (8%) Query: 3 LTDADNAADGIFFP--ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 +T A +G+ + V+ + ++ NPA +++ GY R+E++G N +L Sbjct: 702 VTRRKMAEEGLVLAKMIFDNAGEAIVITDAQGDITDVNPAYQRIMGYTRDEIVGQNPSIL 761 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVY--Y 118 E + + E+ +K G + + E V + Sbjct: 762 KSGRHDEQFYEQMWNEMLSEGH----WQGEIWDRRKSGEIFPKWLTIDAIRDEQGVISNF 817 Query: 119 LALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIVQCNRAFTEMFGY----- 171 + L D + + +EQ +L + L + D ++ + + G Sbjct: 818 VGLFMDITQQKETEEQLEKLAYYDPLTELPNRALFRDRLEQEMRLSARGGKSLGLFFIDL 877 Query: 172 ----CISEASGM-QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLL 214 ++++ G + D LL + +R + + D+ +L Sbjct: 878 DRFKYVNDSLGHDKGDDLLIQVAGRIKHHLRTSDTVARLGGDEFTVIL 925 >UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q60BD0_METCA Length = 1214 Score = 749 bits (1935), Expect = 0.0, Method: Composition-based stats. Identities = 203/798 (25%), Positives = 367/798 (45%), Gaps = 54/798 (6%) Query: 37 FNPAAEKL-WGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNRE-------GGKARVEGMS 88 ++PA +++ W + + G D +P + ++ +RE GG+ + G+ Sbjct: 423 YDPATDRMTWSEETYRIFGLPFDGEVPHRYQEFAALFVPEDRELIEAALRGGRDDLLGVE 482 Query: 89 RELQLEKKDGSKIWTRF--ALSKVSAEGKVYYLALVRDASV----EMAQKEQTRQLIIAV 142 R L + + DG+ F L + ++D + E A ++ +L + V Sbjct: 483 RPLCVRRADGAVRQVNFKVELQGRRGDSGPVLQGTLQDVTERWEAERALRQSEERLRLHV 542 Query: 143 DHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLL 202 +HL VI D + + + N A +FGY G L PE + + + + Sbjct: 543 EHLPLAVIEWDLDFIVSRWNPAAERIFGYGADRMIGRSAGILF--PEDVLEQAEAIWREV 600 Query: 203 WKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNIL 262 + ++ +T G I + +P+ + + DIT + Sbjct: 601 SGGSGNRVVTANVTADGRTIRCEWYNTPLTTPDGTVIGVASLVDDITRREAVEAELRLAA 660 Query: 263 AAMCSSPPFHEMGE--IICRNIESVLNESHVSLFALRNGMPIHWASSSHGAE-------- 312 + G I R + + + P + S HGAE Sbjct: 661 TTFETDEAILIAGADGRILRVNAAFSRITGYRQEDVVGRNPRLFKSGLHGAEFYREVWRS 720 Query: 313 IQNAQSWSATI--RQRDGAPAG----ILQIKTSSGAETSAFIERVADISQHMAALALEQE 366 ++ W I R+++G I +++++G + + ++ +DIS E + Sbjct: 721 LEQTGRWQGEIWNRRKNGEVYPERKTITAVRSANG-DITHYVAISSDIS--------ELK 771 Query: 367 KSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLG 422 ++ + I QL +D +TGLPNR+ + L + A + + +D+ + + DSLG Sbjct: 772 RTEEKIRQLAYYDSLTGLPNRSLIFERLTQQMKAARREGTYGALLFMDLDYFKTLNDSLG 831 Query: 423 YAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVS------NITQIADELRN 476 + D+ L++V R + L+ ++ R+ G +FV++ S A +R Sbjct: 832 HHMGDRLLVQVAERLKNCLEDEEAAARLGGDEFVVLLAPAKPSASVAAGQAIVHARRVRE 891 Query: 477 VVSKPIMIDDKPFPLTLSIGISYDL--GKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAM 534 ++S P +DD +++SIGI+ + +L A AM + G +G +F+ AM Sbjct: 892 LLSAPFQLDDYVHYISVSIGIALFPDGANTAEDVLKQADTAMYVAKNEGRDGVRFYESAM 951 Query: 535 NEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRF 594 +V+ RL L AL++A++N++ ++ YQPQ+ G + G EAL RW P G + P +F Sbjct: 952 EAVVRGRLELEKALRKALANDEFEVYYQPQM-LGDGRVVGAEALIRWFHPERGAISPDQF 1010 Query: 595 IPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAM 654 IP+ E+ G I +G V+ AC LAE R++ + +P LSVN+S F + L Q+ Sbjct: 1011 IPVCEQNGMILRVGAIVLRRACACLAEIRARGLALPKLSVNVSPRQFMRSDLMTQLEQFC 1070 Query: 655 HAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPV 714 G+ L +E+TE +++ H +I L+++GV S+DDFGTG+S L+ L LP+ Sbjct: 1071 LENGVSPTDLCLELTEGVLLNHTELAVAQIGRLKNLGVSFSIDDFGTGYSSLAYLKHLPL 1130 Query: 715 TEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQ 774 ++KI +FV + A++E I S+ + L L V+AEGVET+ Q E+L + C Q Sbjct: 1131 DDLKIASAFVRDLEQDSSDAAIVETIVSMARHLGLDVIAEGVETRTQVEILERYGCHRFQ 1190 Query: 775 GYFFSRPLPAEEIPGWMS 792 G +F+RPLP ++ +++ Sbjct: 1191 GNYFARPLPKDDFIRFVA 1208 Score = 155 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 100/257 (38%), Gaps = 7/257 (2%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A ++ +E + + + + V +NPAAE+++GY + +IG + +L P D+ Sbjct: 530 ALRQSEERLRLHVEHLPLAVIEWDLDFIVSRWNPAAERIFGYGADRMIGRSAGILFPEDV 589 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTR-FALSKVSAEGKVYYLALVRD 124 E I GG G DG I + + +G V +A + D Sbjct: 590 LE-QAEAIWREVSGGS----GNRVVTANVTADGRTIRCEWYNTPLTTPDGTVIGVASLVD 644 Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 E +L D +++ + I++ N AF+ + GY + G P L Sbjct: 645 DITRREAVEAELRLAATTFETDEAILIAGADGRILRVNAAFSRITGYRQEDVVGRNP-RL 703 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 A+ + + L +T R Q E + GE + +I+ V + + V Sbjct: 704 FKSGLHGAEFYREVWRSLEQTGRWQGEIWNRRKNGEVYPERKTITAVRSANGDITHYVAI 763 Query: 245 FSDITEERQIRQLEGNI 261 SDI+E ++ + + Sbjct: 764 SSDISELKRTEEKIRQL 780 >UniRef50_Q47FF8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FF8_DECAR Length = 996 Score = 749 bits (1934), Expect = 0.0, Method: Composition-based stats. Identities = 205/684 (29%), Positives = 322/684 (47%), Gaps = 33/684 (4%) Query: 132 KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFP 191 ++TR+ +D + P +LD E H + N AF G + + G D L E Sbjct: 323 ADKTREGRALLDSIPDPAWLLDNEGHYLAVNEAFCHYKGLPMEQVLGHTVDELFPAEEAK 382 Query: 192 ADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEE 251 +L+ +++ E + L G+ + PVY + L D+TE Sbjct: 383 VLRDGQLE--VYRKGGPVREVVWLHLRGKLSPFEFLRVPVYRDDGQPRGLAGVAWDMTER 440 Query: 252 RQIRQLE----GNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASS 307 + + + A + +++ N ++V S SL L+ P Sbjct: 441 YEAEERQRLITHFFDHANDAVLILDAERQVVTLN-KAVTTISGYSLDDLKGRPPRFMLEG 499 Query: 308 --------SHGAEIQNAQSWSATIR--QRDGAPAGI----LQIKTSSGAETSAFIERVAD 353 + W ++ ++DG+ I I+ +G + V D Sbjct: 500 YQDKVSLDELSLALNEQGVWRGEMKAVRKDGSLLPIYCNISSIRNDAGKVV-NWAVFVTD 558 Query: 354 ISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVDH 413 +S E++ + IE L D +T LPNR + + + A + LI +D Sbjct: 559 LS--------ERKAAEARIESLTHVDQLTELPNRQGFSRIMGEWLAAARKGALILIDLDQ 610 Query: 414 IQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLENDVSNITQIAD 472 + V D+ G+A D L + R R+ L+ +L R+ G QF VL++ +A Sbjct: 611 LSRVNDAFGHAAGDAMLRRISVRLRKILRDGDFLGRLGGDQFGVLLAQGIRPVVAEVVAR 670 Query: 473 ELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFF 530 +L + +++P+MI+ T S GI G + LL A NA+ + + +G N ++FF Sbjct: 671 KLLDAIAQPVMIEGSDIVTTASAGICLLGSDGHDVASLLRNADNALHHAKDSGQNAFRFF 730 Query: 531 SPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVP 590 S MN + ERL L + L+ A+S N+L L YQPQ+ +GE+ G E+L RW P G V Sbjct: 731 SADMNVRMAERLRLESDLRWALSRNELLLHYQPQVDINSGEIIGFESLLRWQHPELGMVS 790 Query: 591 PSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQV 650 P FIPLAEE I IG WV+ EACRQ W+ + ++VNLSA+ F + V Sbjct: 791 PVNFIPLAEESRLILPIGTWVLEEACRQNKAWQDAGMAPKVVAVNLSAVQFHGADIVALV 850 Query: 651 SDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLV 710 S ++ G++ L +EITES+++E + + + L+ +GVGLS+DDFGTG+S LS L Sbjct: 851 SQSLQNSGLEARYLELEITESVIIEDPERVIRIMDELKMLGVGLSIDDFGTGYSSLSYLK 910 Query: 711 SLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHC 770 P+ +IKID+SFV A++ + I + L V+AEGVET EQ E LR HC Sbjct: 911 RFPIDKIKIDRSFVRDLEHNTNDAAIIRMVIGIAEELERKVIAEGVETVEQLEFLRSHHC 970 Query: 771 RVIQGYFFSRPLPAEEIPGWMSSV 794 QG++ S +PA EIP ++S Sbjct: 971 DEYQGFYCSPGVPAGEIPDLVASR 994 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 97/261 (37%), Gaps = 10/261 (3%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 AD +G L+ A L++ + N A G E+V+G+ +D L P + Sbjct: 323 ADKTREG--RALLDSIPDPAWLLDNEGHYLAVNEAFCHYKGLPMEQVLGHTVDELFPAE- 379 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVR 123 + + + R G RE+ G F V + + Sbjct: 380 ----EAKVLRDGQLEVYRKGGPVREVVWLHLRGKLSPFEFLRVPVYRDDGQPRGLAGVAW 435 Query: 124 DASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDT 183 D + +E+ R + DH + V++LD ER +V N+A T + GY + + G P Sbjct: 436 DMTERYEAEERQRLITHFFDHANDAVLILDAERQVVTLNKAVTTISGYSLDDLKGRPPRF 495 Query: 184 LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVM 243 +L + L L + + E + + G + I +IS + + + N + Sbjct: 496 MLEG-YQDKVSLDELSLALNEQGVWRGEMKAVRKDGSLLPIYCNISSIRNDAGKVVNWAV 554 Query: 244 TFSDITEERQIRQLEGNILAA 264 +D++E + ++ Sbjct: 555 FVTDLSERKAAEARIESLTHV 575 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 748 bits (1933), Expect = 0.0, Method: Composition-based stats. Identities = 189/742 (25%), Positives = 323/742 (43%), Gaps = 38/742 (5%) Query: 82 ARVEGMSRELQLEKKDGSKIWTRFA-LSKVSAEGKVYYLALVRDASVEMAQKEQTRQLII 140 A+ G + L L G A L+++ K + L + +++ + T+Q + Sbjct: 250 AQGWGAAGVLALRCALGLLFALLMAYLARLLFALKAHERGLADQVAQRISEIQATQQQLR 309 Query: 141 A-VDHLDRPVIVLDPERHIVQC-NRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRL 198 A +D + P+ +D + ++ + G + G +L + + Sbjct: 310 ATIDAIPDPLFEIDQDGRYCSVHSQRAELLMG-PAEQLIGRNVTEVLPTLAALSVLDVLH 368 Query: 199 QQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLE 258 + + + L L G W + S + +++ DITE ++ ++ Sbjct: 369 EAQAQGWSVGRQIMLDLPDLG-PTWFELSAARKPQAAGAKPRIILLSRDITERKRSQEQL 427 Query: 259 GNILAAMCSSPPFHEMGEI------ICRNIESVLNESHVSLFALRNGMPIHWASSSH--- 309 S + + I R + + + Sbjct: 428 QLTAQVFDQSSEAIVIADASHRIVRINRAFSRITGYQESEAVGQSVRLLTMAEAGPDCNA 487 Query: 310 ---GAEIQNAQSWSAT--IRQRDGA----PAGILQIKT-SSGAETSAFIERVADISQHMA 359 A + + W R++DG+ + ++ + + I DIS Sbjct: 488 DAVYARLARQERWEGESWGRRKDGSGYPQWLSVSSVRDGDANGPITHSITLFRDISL--- 544 Query: 360 ALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV----SPVVYLIGVDHIQ 415 Q ++++ I++L FDP+T LPNR L + + + + +DH + Sbjct: 545 -----QREAQERIQRLAHFDPLTDLPNRVLLAERTQRQIAQEQARGGQLALLFLDLDHFK 599 Query: 416 DVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELR 475 +V DSLG+ D L+ V R + + P + R+ G +F+L+ ++ ++A L Sbjct: 600 NVNDSLGHRIGDILLVAVARRLQSLIGPQDTVSRLGGDEFLLLLPATSAAHAAKVASALL 659 Query: 476 NVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPA 533 V++P ID TLS+GI+ G++ D L A AM +++G N + FF+ Sbjct: 660 TAVAQPFQIDPYELSTTLSVGIAMCPADGESFDTLYQRADAAMYSAKQSGRNRYGFFTAD 719 Query: 534 MNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSR 593 + L + AL+ A+ Q +L YQPQ+ TG++ G EAL RWH P G V P+ Sbjct: 720 LQARTARALQIENALRRALERQQFELHYQPQVSLGTGQVVGAEALLRWHHPELGVVAPAE 779 Query: 594 FIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDA 653 FIP+AE G+I +G WV+ A R W + + A+SVNLSA+ FR QLP V+ Sbjct: 780 FIPVAENSGQIVALGEWVLHTAARDAKRWLDMQLPLRAVSVNLSAVQFRHPQLPEMVTRC 839 Query: 654 MHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLP 713 + G+ +L +E+TE ++ + L D GV LS+DDFGTG+S LS L Sbjct: 840 LQQAGLPARRLELELTEGAAVDDPVAALAMMDQLHDRGVRLSMDDFGTGYSSLSCLKRFQ 899 Query: 714 VTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVI 773 + ++KID+SFV + A++ AI + Q+L + AEGVET Q + LR C Sbjct: 900 IYKLKIDQSFVRDLDDDANDRAIVSAIIRMAQALGMQTTAEGVETDGQLQFLRAQGCDEG 959 Query: 774 QGYFFSRPLPAEEIPGWMSSVL 795 QGY FSRPLPA+ ++ ++ Sbjct: 960 QGYLFSRPLPADAFEAYLRAMK 981 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 99/259 (38%), Gaps = 10/259 (3%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFF-NPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 A ++ I+++ + AE L G E++IG N+ ++P Sbjct: 302 QATQQQLRATIDAIPDPLFEIDQDGRYCSVHSQRAELLMG-PAEQLIGRNVTEVLPTLAA 360 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS--AEGKVYYLALVRD 124 + + + + G + + R++ L+ D W + ++ A K + L RD Sbjct: 361 LSVLDVLHEAQAQGWS----VGRQIMLDLPDLGPTWFELSAARKPQAAGAKPRIILLSRD 416 Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 + +EQ + D +++ D IV+ NRAF+ + GY SEA G L Sbjct: 417 ITERKRSQEQLQLTAQVFDQSSEAIVIADASHRIVRINRAFSRITGYQESEAVGQSVRLL 476 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL--AHLQNLV 242 P N + L + R + E + G S+S V D + + + Sbjct: 477 TMAEAGPDCNADAVYARLARQERWEGESWGRRKDGSGYPQWLSVSSVRDGDANGPITHSI 536 Query: 243 MTFSDITEERQIRQLEGNI 261 F DI+ +R+ ++ + Sbjct: 537 TLFRDISLQREAQERIQRL 555 Score = 72.4 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 65/145 (44%), Gaps = 9/145 (6%) Query: 3 LTDADNAADGIFFPA--LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 +T+ + + + A +Q+ V+ + + ++ N A ++ GY+ E +G ++ +L Sbjct: 417 ITERKRSQEQLQLTAQVFDQSSEAIVIADASHRIVRINRAFSRITGYQESEAVGQSVRLL 476 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV---SAEGKV- 116 + P + R + R EG E +KDGS ++S V A G + Sbjct: 477 TMAEAGPDCNADAVYARLARQERWEG---ESWGRRKDGSGYPQWLSVSSVRDGDANGPIT 533 Query: 117 YYLALVRDASVEMAQKEQTRQLIIA 141 + + L RD S++ +E+ ++L Sbjct: 534 HSITLFRDISLQREAQERIQRLAHF 558 >UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AX01_9CHRO Length = 1409 Score = 748 bits (1932), Expect = 0.0, Method: Composition-based stats. Identities = 201/824 (24%), Positives = 376/824 (45%), Gaps = 58/824 (7%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP 67 + +EQ + +++ +++ N EK+WG+ E D+L + Sbjct: 607 RQQQELLKTIVEQIPVMLAYFDQHYNLLWVNREWEKIWGWSLEN--RQKGDLLAEFEPES 664 Query: 68 AHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI---WTRFALSKVSAEGKVYYLALVRD 124 + + + + + + + R+ ++ +DG I W LS ++ +A+ +D Sbjct: 665 EYRQSVLNYIKSAQGKW----RDFKILVRDGRIIDTSWANVKLSDGTS------IAIGQD 714 Query: 125 ASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDPE-RHIVQCNRAFTEMFGYCISEASGM 179 + +E R+ + D P+ V D E ++ N+A E +GY E M Sbjct: 715 ITERKRIEEILRESEEKYRLFFDANPNPLWVYDLETFAFLEVNQATIEHYGYTREEFLAM 774 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 + + P + LQ + ++ GE I ++ + + A + Sbjct: 775 TIRDIRPPEDVPLLEQYILQ--INPHFNRSGQWRHRKANGEIIDVEITSHGL--EYAGRK 830 Query: 240 NLVMTFSDITEE----RQIRQLEGNILAAMCSSP----PFHEMGEIICRN--IESVLNES 289 ++ DITE + +++ + A+ +P E GEI+ N + Sbjct: 831 ARLVLAHDITERLKAEKALQESKERFHRAIVDAPLPILIHAEDGEIVQVNHAWTELSGYH 890 Query: 290 HVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPA-GILQIKTSSGAE----- 343 L + + W ++G +S + + DG G I SG Sbjct: 891 LDELSTIAD-----WTEKAYGERKDIVRSVIDQLYEIDGKVEEGEFAITIKSGETRIWDF 945 Query: 344 TSAFIERVADISQHMAALAL---EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDK 400 +SA + ++AD + + ++A+ E++++ + + + D +TGLPNR L + ++ + + Sbjct: 946 SSAPLGKLADGRRLIISMAIDITERKQAEEQLRHSVLHDGLTGLPNRTLLLDRVEQAIKR 1005 Query: 401 AVS-----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF 455 + I +D + V DSLG+ DQ L + ++ + ++P + R G +F Sbjct: 1006 KQQQPNYLFAILFIDLDRFKVVNDSLGHLVGDQLLKTIADKLQRCVRPTDTVARFGGDEF 1065 Query: 456 VLVSLENDV-SNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTA 512 V++ + + ++ T++A + + ++ + + SIGI++ + L+ A Sbjct: 1066 VILLEDLTIWTDATKMAQRITEEFESSFTLQEQEYFTSASIGITFCSSPEQTPSELVRNA 1125 Query: 513 HNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGEL 572 AM ++ G + F P M+ + L L L+ A+ + + YQP + L Sbjct: 1126 DIAMYRSKEAGRARYTMFDPIMHTQATQLLELETNLRLALEREEFIVYYQPIVSLMNRNL 1185 Query: 573 YGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ--NIHIP 630 G EAL RW P G + P+ FIP+AEE G I +G WV+ E+CRQ+ W+ Q Sbjct: 1186 LGFEALVRWIHPEKGVISPANFIPVAEETGLIIPLGEWVLRESCRQMKAWQEQFIGAENL 1245 Query: 631 ALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDM 690 +SVNLS + L N++ + + G++G L +EITESM+M + ++ + + ++ Sbjct: 1246 RVSVNLSGKQLQQPNLINRIDNILTETGLEGKNLKLEITESMLMNNKEQVSELLLQMKAK 1305 Query: 691 GVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLT 750 + +S+DDFGTG+S LS L LPV +KID+SFV R ++EAI ++ L + Sbjct: 1306 KIQVSIDDFGTGYSSLSYLHYLPVDTLKIDRSFVSRMSQVGENFEIVEAIITLAHHLQMD 1365 Query: 751 VVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 VVAEGVET++ L+++ C QGYFFS+PL +E+I W+ + Sbjct: 1366 VVAEGVETEQHLRQLQQLGCEFGQGYFFSKPLESEKIVSWLERL 1409 Score = 85.1 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 61/402 (15%), Positives = 130/402 (32%), Gaps = 43/402 (10%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGY-KREEVIGNNI-DM 59 +L + + ++ ALE + N ++ +P + GY REE I Sbjct: 471 QLVEKLSKSEERLQLALEGSGDTIWEWNLGTGELYCDPNWIRRLGYDPREEAINIEWWRS 530 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK---V 116 I + H + + G + + E +++ +G +W ++ + + + Sbjct: 531 KIDPETLSDHEAALENYLNGKTEYL---ALEYKIQTLEGEWLWIGGRGKCIAYDQQRKPL 587 Query: 117 YYLALVRDASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYC 172 L RD + +E RQ L V+ + + D +++ NR + +++G+ Sbjct: 588 KILGTHRDITETKQTQENLRQQQELLKTIVEQIPVMLAYFDQHYNLLWVNREWEKIWGWS 647 Query: 173 ISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVY 232 + Q LL E ++ R + + +F +L R G I + + Sbjct: 648 LE---NRQKGDLLAEFEPESEYRQSVLNYIKSAQGKWRDFKILVRDGRIIDTSWANVKLS 704 Query: 233 DVLAHLQNLVMTFSDITEERQIRQLEGNI-------------------LAAMCSSPPFHE 273 D + + DITE ++I ++ L Sbjct: 705 DGTS-----IAIGQDITERKRIEEILRESEEKYRLFFDANPNPLWVYDLETFAFLEVNQA 759 Query: 274 MGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGI 333 E E L + + + + + W R+ +G + Sbjct: 760 TIEHYGYTREEFLAMTIRDIRPPEDVPLLEQYILQINPHFNRSGQWRH--RKANGEIIDV 817 Query: 334 -LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQ 374 + A A + DI++ + A QE S++ + Sbjct: 818 EITSHGLEYAGRKARLVLAHDITERLKAEKALQE-SKERFHR 858 Score = 80.1 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 69/445 (15%), Positives = 132/445 (29%), Gaps = 79/445 (17%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A A++ + +E + F N A + + V+ N LI + Sbjct: 303 ALRASESRYRGIVEDQSEFICRYRPGGTLTFVNQAYCRYFQKTPAAVLDNTFWDLIYSED 362 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVR 123 +P + N ++ E ++ G W ++ + E + + + A+ R Sbjct: 363 QPQ----VAQNIASLTPENPMITHEHRVRLSSGEIRWNQWTNRVIMDEKRNIIEFQAVGR 418 Query: 124 DASVEMAQKEQTRQ---------------------------------------------- 137 D + + RQ Sbjct: 419 DITQLKQVEAALRQLNEELEQRVEQRTAELAAEIRERQEIETALIKSQAKYEQLVEKLSK 478 Query: 138 ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY-CISEASGMQPDTLLNIPEFPA 192 L +A++ + + + C+ + GY EA ++ PE + Sbjct: 479 SEERLQLALEGSGDTIWEWNLGTGELYCDPNWIRRLGYDPREEAINIEWWRSKIDPETLS 538 Query: 193 DNRIRLQQLL-WKTARDQDEFLLLTRTGEKIWIKASISPV-YDVLAHLQNLVMTFSDITE 250 D+ L+ L KT E+ + T GE +WI + YD ++ T DITE Sbjct: 539 DHEAALENYLNGKTEYLALEYKIQTLEGEWLWIGGRGKCIAYDQQRKPLKILGTHRDITE 598 Query: 251 ERQIR---QLEGNILAAMCSSPP-----FHEMGEI--ICRNIESVLNESHVSLFALRNGM 300 +Q + + + +L + P F + + + R E + S + Sbjct: 599 TKQTQENLRQQQELLKTIVEQIPVMLAYFDQHYNLLWVNREWEKIWGWSLENRQKGDLLA 658 Query: 301 PIHWASSSHGAEIQNAQSWSATIRQ-----RDGAPAGILQIKTSSGAETSAFIERVADIS 355 S + + +S R RDG TS I DI+ Sbjct: 659 EFEPESEYRQSVLNYIKSAQGKWRDFKILVRDGRIIDTSWANVKLSDGTS--IAIGQDIT 716 Query: 356 QHMAALALEQEKSRQHIEQLIQFDP 380 + + +E + + FD Sbjct: 717 ERKRIEEILRESEEK---YRLFFDA 738 Score = 56.2 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 24/182 (13%), Positives = 54/182 (29%), Gaps = 6/182 (3%) Query: 98 GSKIWTR--FALSKVSAEGKVYYLALV---RDASVEMAQKEQTRQLIIAVDHLDRPVIVL 152 G W ++ + Y++L R +E A + + V+ + Sbjct: 266 GRLFWLMSGLLITTILLMSLWRYISLRPFYRLQQIEAALRASESRYRGIVEDQSEFICRY 325 Query: 153 DPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEF 212 P + N+A+ F + L+ + P + L + E Sbjct: 326 RPGGTLTFVNQAYCRYFQKTPAAVLDNTFWDLIYSEDQP-QVAQNIASLTPENPMITHEH 384 Query: 213 LLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFH 272 + +GE W + + + D ++ DIT+ +Q+ + + Sbjct: 385 RVRLSSGEIRWNQWTNRVIMDEKRNIIEFQAVGRDITQLKQVEAALRQLNEELEQRVEQR 444 Query: 273 EM 274 Sbjct: 445 TA 446 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 59/163 (36%), Gaps = 6/163 (3%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 +K A + F A+ + ++ E+ E++ N A +L GY +E+ + I Sbjct: 843 LKAEKALQESKERFHRAIVDAPLPILIHAEDGEIVQVNHAWTELSGYHLDEL--STIADW 900 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS--AEGKVYY 118 + + + + E + K G F+ + + A+G+ Sbjct: 901 TEKAYGERKDIVRSVIDQLYEIDGKVEEGEFAITIKSGETRIWDFSSAPLGKLADGRRLI 960 Query: 119 LALVRDASVEMAQKEQTRQ--LIIAVDHLDRPVIVLDPERHIV 159 +++ D + +EQ R L + L ++LD + Sbjct: 961 ISMAIDITERKQAEEQLRHSVLHDGLTGLPNRTLLLDRVEQAI 1003 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 748 bits (1932), Expect = 0.0, Method: Composition-based stats. Identities = 191/780 (24%), Positives = 334/780 (42%), Gaps = 86/780 (11%) Query: 89 RELQLEKKDGSKIWTRFALSKVSAEGKVYY--LALVRDASVEMA----QKEQTRQLIIAV 142 + + +DG +W L + G Y + D S ++ Q L + V Sbjct: 15 HDYRFYHRDGRIVWLLDQLQLIRDAGDRPYEVVGTCLDISERKRTELIRQAQQSALDLIV 74 Query: 143 DHLDRPVIVLDPERHIVQCNRAFTE---MFGYCISEA-SGMQPDTLLNIPEFPADNRIRL 198 + PVI+ D +H+ N + G P L A N + Sbjct: 75 TNQSLPVILSDIAKHLEAINPDMLVSILLLDKQTKRLKLGAAPS--LPDDYNAAVNGQEI 132 Query: 199 QQLLW--KTARDQDEFLLLTR-TGEKIWIKA------------SISPVYDVLAHLQNLVM 243 + + TA + E ++++ W P D + + Sbjct: 133 GEGVGSCGTAAFRGETVIVSDIDHHPHWQHFLDLTRKADLHACWSLPFKDEHNDVLGIFA 192 Query: 244 TFSDIT-----EERQIRQLEGNILAAMCSSPPFHEMGEI--------------------- 277 + I ++ ++ + + A E + Sbjct: 193 IYHHIACEPSPKDLELIREFASFTALAVQKVRATEALRLSATVFASIREGVVITDLEPRI 252 Query: 278 --ICRNIESVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDG 328 + R + S + +++G+ + A ++ WS + R+++G Sbjct: 253 VAVNRAYMRITGYSEEQVLGKNPKIIKSGLHDKTFYQAMWATLKATGHWSGEVWNRRKNG 312 Query: 329 A----PAGILQIKTSSG----AETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDP 380 I + S + + ++ DISQ ++S + QL +DP Sbjct: 313 EIYPQWLTINAVCIDSSCCDESNSCNYVGVFTDISQI--------KQSEAQLAQLAHYDP 364 Query: 381 MTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNR 436 +TGLPNR + L +++A V I +D ++V DSLG+ D+ L+++ R Sbjct: 365 LTGLPNRLLAQSQLHQAIERAQRHGRLVGVLYIDLDRFKNVNDSLGHPVGDELLIKLAER 424 Query: 437 FREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMI-DDKPFPLTLS 494 +++++ + L R+ G +F+LV + D+ + +A L N+++ P ++ + S Sbjct: 425 MKKRVREEDTLARLGGDEFLLVLEDVRDLGDPAFVAQSLINLLTSPFVLPSGHEIFINAS 484 Query: 495 IGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAI 552 IGIS + N L+ + AM +K G N +++ + A++ ERL++ L+ A+ Sbjct: 485 IGISLFPEDASNATELIQHSDMAMYQAKKEGRNTYRYHTEALSVAANERLIMENRLRYAL 544 Query: 553 SNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVI 612 S +L L YQP + A TG + G+EAL RW P VPP +FIP+AEE G I +G WV+ Sbjct: 545 SAEELILHYQPLVDARTGYVVGVEALVRWQPPGKAMVPPGKFIPIAEETGLIVPLGEWVL 604 Query: 613 AEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESM 672 AC+Q W + ++VNLS F+S L V + + L +E+TESM Sbjct: 605 RTACKQARAWIDAGLSPLVMAVNLSVRQFQSENLVGMVQRILEETQLPADYLELELTESM 664 Query: 673 MMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKR 732 MEH + + + L+ +GV L++DDFGTG+S L L P+ ++KID+ FV + Sbjct: 665 FMEHVEQSIETLNKLKTLGVHLAIDDFGTGYSSLIYLKRFPIDKLKIDQRFVRDLADDHN 724 Query: 733 ILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 + I ++ + L L V+AEG+E++EQ LR+ C QGY F RP+PA E+ W+ Sbjct: 725 DREIAATIIAMARGLKLGVLAEGIESEEQLAFLRQQDCDYYQGYLFHRPVPAIELEAWLR 784 Score = 63.5 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 86/250 (34%), Gaps = 31/250 (12%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 ++ T+A + +F E G V+ + ++ N A ++ GY E+V+G N ++ Sbjct: 223 VRATEALRLSATVFASIRE----GVVITDLEPRIVAVNRAYMRITGYSEEQVLGKNPKII 278 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVY--- 117 H + S E+ +K+G ++ V + Sbjct: 279 KSG----LHDKTFYQAMWATLKATGHWSGEVWNRRKNGEIYPQWLTINAVCIDSSCCDES 334 Query: 118 ----YLALVRDASVEMAQKEQTRQL------------IIAVDHLDRPVIVLDPERHIVQC 161 Y+ + D S + Q QL ++A L + + +V Sbjct: 335 NSCNYVGVFTDISQIKQSEAQLAQLAHYDPLTGLPNRLLAQSQLHQAIERAQRHGRLVGV 394 Query: 162 NRAFTEMFGYCISEASGMQP-DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLL--LTRT 218 + F ++++ G D LL R+R + L + D+ +L + Sbjct: 395 LYIDLDRF-KNVNDSLGHPVGDELLIKLAERMKKRVREEDTLARLGGDEFLLVLEDVRDL 453 Query: 219 GEKIWIKASI 228 G+ ++ S+ Sbjct: 454 GDPAFVAQSL 463 Score = 51.6 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 34/227 (14%), Positives = 73/227 (32%), Gaps = 52/227 (22%) Query: 199 QQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQ---IR 255 Q +L + ++ R G +W+ + + D +V T DI+E ++ IR Sbjct: 4 QSILISEGQLVHDYRFYHRDGRIVWLLDQLQLIRDAGDRPYEVVGTCLDISERKRTELIR 63 Query: 256 QLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNG-----------MPIHW 304 Q + + L + ++ + I +++E++ + VS+ L +P + Sbjct: 64 QAQQSALDLIVTNQSLPVILSDIAKHLEAINPDMLVSILLLDKQTKRLKLGAAPSLPDDY 123 Query: 305 ASSSHGAEIQNA--------------------------------------QSWSATIRQR 326 ++ +G EI WS + Sbjct: 124 NAAVNGQEIGEGVGSCGTAAFRGETVIVSDIDHHPHWQHFLDLTRKADLHACWSLPFKDE 183 Query: 327 DGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIE 373 GI I E S + ALA+++ ++ + + Sbjct: 184 HNDVLGIFAIYHHIACEPSPKDLELIREFASFTALAVQKVRATEALR 230 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 748 bits (1931), Expect = 0.0, Method: Composition-based stats. Identities = 187/732 (25%), Positives = 333/732 (45%), Gaps = 63/732 (8%) Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVL----DPERHIVQCNRAFTEMFGYCISEASGMQ 180 E + + ++ + +H + + D ER I++CNR F +++ Y + E G Sbjct: 200 IQNEHSLRNTLKEQEVIFEHAGTGICFIKDSQDHERKIIRCNRKFADIYDYRVEELIGQS 259 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 L E ++ L + + + + G W + + + L Sbjct: 260 SSILYPDFEAFSELGDSAYPSLMEGTLYTQKMKMKRKDGTLFWTQIRGNIISSNEPGL-G 318 Query: 241 LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRN---------IESVLNESHV 291 + DI ++ + + IL + +G + +N E + + Sbjct: 319 YIWIVEDIDQQVKADEALKVILNEQNLILDYAMVGIVFLKNRSVTRCNQRFEEMFGYNAG 378 Query: 292 SLFALRNG----MPIHWASS--SHGAEIQNAQSWSAT--IRQRDGAPAG--ILQIKTSSG 341 L + W ++ + + + + + ++DG+P + Sbjct: 379 ELAGSSSRQWYLTEQDWKAAGKACYKPLSQGKVFQDEMLLSRKDGSPIWCEVTSKAIDPD 438 Query: 342 AETSAFIERVADISQHMAALAL-------------------------------EQEKSRQ 370 I DI++ AA E++ + + Sbjct: 439 DLAKGSIWITMDITERKAADVALARAHEDLELRVKERTKELAKANMDLLVEINERKMAEE 498 Query: 371 HIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV----SPVVYLIGVDHIQDVIDSLGYAWA 426 ++ + D +TGLPNR L L++ + A V I +D + V D+LG+ Sbjct: 499 RVKHMALHDALTGLPNRLLLEERLENALSDAKSHQWQLAVLFIDLDRFKLVNDTLGHHEG 558 Query: 427 DQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMID 485 DQ L+EV NR + + + + R+ G +FV+V E + I + ++++ + + Sbjct: 559 DQLLVEVANRLHQVIGANDTVARLGGDEFVIVLNEIAGSTEINGVIEDIQQNFKPAVKLA 618 Query: 486 DKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLV 543 + +T SIG++ + G+ L+ A AM + + +G N Q+F+ ++++ +KER+ Sbjct: 619 LQDMFVTPSIGVAIYPEDGETPVQLMKNADAAMYHAKASGRNCAQYFNRSLDDSLKERIS 678 Query: 544 LGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGE 603 L AL +A+ Q +L YQPQ+ ++ + G EAL RW+ P G + P FIPLAEE G Sbjct: 679 LENALNQALKLGQFELYYQPQLDVKSNRIIGAEALIRWNHPEKGMISPDAFIPLAEESGL 738 Query: 604 IENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQ 663 I +IG WV+ +A QLA+WR Q ++SVNLSAL + +V+D + +G+ Sbjct: 739 IVDIGSWVLHQASSQLAQWRKQGFDQLSVSVNLSALQVQKESFAREVADVIREYGVPEAC 798 Query: 664 LTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSF 723 L +E+TESM+M + E + + ++G+ +SVDDFGTG+S LS L P+ ++KID+SF Sbjct: 799 LDLELTESMIMRNAEETIAALDKIHNLGIQISVDDFGTGYSSLSYLKRFPLDKLKIDRSF 858 Query: 724 VDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLP 783 V + + + I S+ +LNL V+AEGVET Q E+LR C QGY F++PLP Sbjct: 859 VQDITVDTDDAMICKTIISMAHNLNLQVIAEGVETNAQLELLRDYGCEQYQGYLFAKPLP 918 Query: 784 AEEI-PGWMSSV 794 E++ ++S Sbjct: 919 VEQMTEHLLASP 930 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 57/314 (18%), Positives = 117/314 (37%), Gaps = 20/314 (6%) Query: 18 LEQNMMGAVLI----NENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 E G I + +++ N ++ Y+ EE+IG + +L P D Sbjct: 217 FEHAGTGICFIKDSQDHERKIIRCNRKFADIYDYRVEELIGQSSSILYP-DFEAFSELGD 275 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA-EGKVYYLALVRDASVEMAQK 132 + + ++++++++KDG+ WT+ + +S+ E + Y+ +V D ++ Sbjct: 276 SAYPSLMEGTL--YTQKMKMKRKDGTLFWTQIRGNIISSNEPGLGYIWIVEDIDQQVKAD 333 Query: 133 EQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 E + + + +D+ ++ L R + +CN+ F EMFGY E +G Sbjct: 334 EALKVILNEQNLILDYAMVGIVFL-KNRSVTRCNQRFEEMFGYNAGELAGSSSRQWYLTE 392 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 + + L + QDE LL + G IW + + + D + + DI Sbjct: 393 QDWKAAGKACYKPLSQGKVFQDEMLLSRKDGSPIWCEVTSKAI-DPDDLAKGSIWITMDI 451 Query: 249 TEERQIRQLEGNILAAMCSSPPFHEM------GEIICRNIESVLNESHVSLFALRNGMPI 302 TE + + +++ E + E V AL + + Sbjct: 452 TERKAADVALARAHEDLELRVKERTKELAKANMDLLVEINERKMAEERVKHMALHDALTG 511 Query: 303 HWASSSHGAEIQNA 316 ++NA Sbjct: 512 LPNRLLLEERLENA 525 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 748 bits (1931), Expect = 0.0, Method: Composition-based stats. Identities = 191/700 (27%), Positives = 318/700 (45%), Gaps = 45/700 (6%) Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPE-----RHIVQCNRAFTEMFGYCISEASGM 179 A + T++L +D L + N T M G+ ++EA Sbjct: 264 VRERAALRTMTQRLEEVLDCSPSVNYTLTRGEEGWVGTWMSHN--LTRMTGFSVAEALAQ 321 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 P+ + R + + + E+ + G WI+ + V D + Sbjct: 322 GWWARTVHPD-DLERASRAVRAVEEDGHYVHEYRIRCADGGVRWIRDELRAVRDEGGRVV 380 Query: 240 NLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESHVSL 293 + + DITE+RQ +L A + S+ + ++ + R V S + Sbjct: 381 RVAGVWIDITEQRQATELLRLNSAVIESTHDGVVLTDLDGAIVAVNRAFTEVTGYSRDEV 440 Query: 294 FA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQIKTSSGAET-- 344 L++G S A ++ A W + R+++G + E Sbjct: 441 VGQNPRFLQSGRHDRGFYLSMWAALKEAGHWQGELWNRRKNGELFPEWLTLNAVRNEVGH 500 Query: 345 -SAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS 403 + ++ DIS+ +++ ++ L DP+T LPNR + + L+ +D A Sbjct: 501 VTHYVGVFTDISK--------LKQTEDRLDYLAHHDPLTDLPNRLLVLSRLEHALDGAQR 552 Query: 404 ----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLV 458 V + +D + V DSLG+A D+ L V R R L+ + L R+ G +F VL+ Sbjct: 553 RGCRVAVMFLDLDRFKTVNDSLGHAAGDELLRAVAARLRGALREEDTLGRLGGDEFMVLL 612 Query: 459 SLENDVSNITQIADELRNVVSKPIMI-DDKPFPLTLSIGISY--DLGKNRDYLLSTAHNA 515 ++ +A L V++ P + + + SIGIS+ D G + L+ A A Sbjct: 613 EHVEAPADAAVVAKNLVEVLAAPFALSNGHEVFIRASIGISFYPDDGDDFMTLVRNADAA 672 Query: 516 MDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGI 575 M + G N + F++ + ERL L L+ A+ +++ + YQP + + G L G Sbjct: 673 MYRAKAQGRNTYGFYTEDLIRSATERLALETRLRRALEHDEFVVYYQPVLGVKDGRLLGA 732 Query: 576 EALARWHDPLHG--HVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALS 633 EAL RW P G V P+ FIP+AEE G I +G WV+ +ACRQ+ EW ++ Sbjct: 733 EALVRWK-PQ-GEPMVSPAAFIPVAEETGLIVALGEWVLRDACRQVREWIDAGYAFGQVA 790 Query: 634 VNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVG 693 VNLSA FR + ++ + G+ QL +EITES ++E ++ L+ GVG Sbjct: 791 VNLSAEQFRRQDVSAMLATVLAETGLPATQLELEITESSLLEAGEHAVGLLERLKQQGVG 850 Query: 694 LSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVA 753 L++DDFGTG+S L+ L + ++KID+SFV + LA+ AI ++ ++L++ V A Sbjct: 851 LAIDDFGTGYSSLAYLKRFSIDKLKIDRSFVQDIADDSNDLAIASAIVAMARALDMAVQA 910 Query: 754 EGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPG-WMS 792 EGVE + Q E+LR + C QGY S PLPA+E ++ Sbjct: 911 EGVEGEAQLELLRGLGCGSYQGYLCSPPLPADEFEARFLR 950 Score = 148 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 47/233 (20%), Positives = 82/233 (35%), Gaps = 9/233 (3%) Query: 35 MFFNPAAEKLWGYKREEVIGNNI-DMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQL 93 + + ++ G+ E + + D +R E G E ++ Sbjct: 301 TWMSHNLTRMTGFSVAEALAQGWWARTVHPDDLERASRAVRAVEEDGH-----YVHEYRI 355 Query: 94 EKKDGSKIWTRFALSKVSAEGK--VYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIV 151 DG W R L V EG V + D + + E R ++ V++ Sbjct: 356 RCADGGVRWIRDELRAVRDEGGRVVRVAGVWIDITEQRQATELLRLNSAVIESTHDGVVL 415 Query: 152 LDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDE 211 D + IV NRAFTE+ GY E G P L + + L + Q E Sbjct: 416 TDLDGAIVAVNRAFTEVTGYSRDEVVGQNP-RFLQSGRHDRGFYLSMWAALKEAGHWQGE 474 Query: 212 FLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAA 264 + GE +++ V + + H+ + V F+DI++ +Q + Sbjct: 475 LWNRRKNGELFPEWLTLNAVRNEVGHVTHYVGVFTDISKLKQTEDRLDYLAHH 527 Score = 72.8 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 50/143 (34%), Gaps = 8/143 (5%) Query: 1 MKLTDADNAADGIFF--PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNID 58 + +T+ A + + +E G VL + + ++ N A ++ GY R+EV+G N Sbjct: 387 IDITEQRQATELLRLNSAVIESTHDGVVLTDLDGAIVAVNRAFTEVTGYSRDEVVGQNPR 446 Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKV 116 L H + EL +K+G W + Sbjct: 447 FLQSGR----HDRGFYLSMWAALKEAGHWQGELWNRRKNGELFPEWLTLNAVRNEVGHVT 502 Query: 117 YYLALVRDASVEMAQKEQTRQLI 139 +Y+ + D S +++ L Sbjct: 503 HYVGVFTDISKLKQTEDRLDYLA 525 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 747 bits (1930), Expect = 0.0, Method: Composition-based stats. Identities = 209/812 (25%), Positives = 356/812 (43%), Gaps = 48/812 (5%) Query: 9 AADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPA 68 A + + I+ V F +PA L +EV G ++ L+ A Sbjct: 288 EAQRRLEGIVAASSDAMAFIDTEGLVGFASPALCHLLSIGTQEVRGRQLEELL------A 341 Query: 69 HPEYIRHNREGGKARVEG--MSRELQLEKKDGSKIWTRFALSKV--SAEGKVYYLALVRD 124 R +G + + G + + L G + + V + ++RD Sbjct: 342 AYANRRELMQGIEGALAGRNLRMQTWLTLPGGGVRCLESSFDPYRNTEGQVVGAVCVLRD 401 Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 + +T A +LD + ++ ++ E+ + + Sbjct: 402 MTD---NARKTLLFEQAERAAQIGGWMLDIDADVLDLSQQARELLNIAADRQQVPLAEVM 458 Query: 185 LNIPEFPADNRIRLQQLLW-----KTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 E RL + T + +L+T G + + S + V+ Sbjct: 459 AQFDEATFKKAGRLLEAFRHSHSVATHEIHFDAVLVTPHGVRRRLALSARTLQ-VVGQGH 517 Query: 240 NLVMTFSDITEERQIRQL---EGNILAAMCSSPPFHEMGEIICR---NIESVLNESHVSL 293 + + D+T R+ + + + + I R E++ + + Sbjct: 518 YVTGSVQDVTSLRRAERELMLSAQVFEHGSEAVFITDASHRILRVNPAFEAITGYAAGEV 577 Query: 294 FALRNGM-----PIHWASSSHGAEIQNAQSWSATI--RQRDGAPA---GILQIKTSSGAE 343 L P + S + W I R+R G L + + Sbjct: 578 LGLTPDFRCVSSPGGTSISQRWELAEQTGRWQGEIVCRRRSGEHYYEWSALSVVRHANGS 637 Query: 344 TSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS 403 FI + +DIS AA A + FDP+TGLPNR+ L + L +++++ Sbjct: 638 VLYFIGQFSDISAVKAAEARALRLAC--------FDPLTGLPNRSLLFDRLQEVLNREPH 689 Query: 404 -PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE- 461 V +D +++ DSLG+ D L EV R +++P +CR G +FVLV Sbjct: 690 NGAVLFCDLDRFKNINDSLGHTLGDAVLKEVARRLVARVRPGDTVCRYGGDEFVLVLPGL 749 Query: 462 NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYI 519 +D + Q+A++L VS PI++D +T S+G++ G + D LL A A+ + Sbjct: 750 SDCVVLEQLAEQLLADVSSPILLDGLDLRVTPSLGVAVFPRDGNDCDALLRHADAALYHA 809 Query: 520 RKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALA 579 + G N ++FF+ +++ V E L + L+ A+ + +L YQPQ+ G + G+EAL Sbjct: 810 KSRGRNTYRFFTREIDDRVSEYLHIEHGLRSALERGEFELHYQPQVDMAFGRVVGVEALL 869 Query: 580 RWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSAL 639 RW P G + P RF+P+AEE G I IG WVI EACRQ WR + ++VNLS Sbjct: 870 RWKHPEQGMISPVRFVPIAEETGLIVPIGMWVIREACRQAMLWRRAGLRPMTMAVNLSGR 929 Query: 640 HFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDF 699 F + + + +A+ G+D L VE+TES++ME E + ++ LR G+ ++VDDF Sbjct: 930 QFSRS-VIEAIDEALADSGLDPRWLQVEVTESVIMEDTQEAYTVLEALRARGLTVAVDDF 988 Query: 700 GTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETK 759 GTG+S L+ L P+ ++KID+SF+ ++ +++AI + +L + V+AEGVET+ Sbjct: 989 GTGYSSLAYLKRFPIDKLKIDRSFIRDIDLDEDNPVIVDAIIGMAHNLRIKVLAEGVETR 1048 Query: 760 EQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 Q++ LR+ C +QGY SRP PA + WM Sbjct: 1049 AQWDYLRQQGCDEVQGYLVSRPQPAAALGQWM 1080 Score = 58.9 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 38/294 (12%), Positives = 93/294 (31%), Gaps = 26/294 (8%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 +LT + + AL G + ++ + ++ NP A ++ E+ + Sbjct: 22 ELTAPAHWPGEYYRTALAHLNEGVLFVSPSGCMVPGNPEAVRIIAVPSAELSHVTREGEW 81 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRE---LQLEKKDGSKI-WTRFALSKV---SAEG 114 P +R G +A G + E + + + +++ W R + V + Sbjct: 82 ETLTENGEP-LAMADRPGARACFAGETVERQVVGMRRPGAAEVQWLRMNAAPVYQPEQQE 140 Query: 115 KVYYLALVRDASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFG 170 V + D + E ++E ++ + D ++ A+ +M G Sbjct: 141 PVGAVVTFVDITRERQRQESLQRMEARWQALFETSGDVAYDFDVATRRLELAPAWMQMLG 200 Query: 171 YCISEASGMQPDTLLN--IPEFPADNRIRLQQLLWKTARDQD-----EFLLLTRTGEKIW 223 G PD + R ++ L + + E+ LL +G+ + Sbjct: 201 ------LGRMPDDHYQDWLERVDPQVRDDVEAALCAHLQGETADYSVEYPLLHESGDWLH 254 Query: 224 IKASISPV-YDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE 276 + D + D++ + + + + + +S + Sbjct: 255 VFERGRVYQRDADGKPLRMHGVIIDLSRQLHAEEAQRRLEGIVAASSDAMAFID 308 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 747 bits (1929), Expect = 0.0, Method: Composition-based stats. Identities = 186/702 (26%), Positives = 324/702 (46%), Gaps = 34/702 (4%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 ++R A ++ L ++ + P+ ++D + +I+ N ++FG G + Sbjct: 369 IMRYKKTLQALRQSEGTLKAMLESIADPIHMVDRDLNILWANDIAKQLFGKN---LVGQK 425 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASIS-PVYDVLAHLQ 239 L+ P D + E L E+ + + D Sbjct: 426 CYAALHRSPTPCDPMCHAIKAFSDGHAHSSENLFFDINDEERCFLVTANVASTDSQGQPS 485 Query: 240 NLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICR---------NIESVLNESH 290 ++ D+TE ++ +Q ++ +S M ++ R ++ E Sbjct: 486 AVLTISRDVTEIKKTQQQFHQAKWSIDASLTPMLMADLQGRLTYANQAALDLWGYAGEEE 545 Query: 291 VSLFALRNGMPIHWASSSHGAEIQNAQSWSATIR--QRDGAPAGI---LQIKTSSGAETS 345 V + + ++ W R Q++G + Q+ Sbjct: 546 VLGKNIVEFQEDPQRTRIIMEILKARGVWRGEGRGKQKNGNGFDVELQAQVVKDQNGGPL 605 Query: 346 AFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS-- 403 + + DI+ ++ K+ I++L FD +TGLPNR L ++++ + +A Sbjct: 606 SILASAIDIT--------DKRKTELQIKKLAYFDSLTGLPNRTLLKDHMELALGQARRLN 657 Query: 404 --PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE 461 V L+ +D+ + + D+LG+A D + V R R + + L R G +FVL+ + Sbjct: 658 KFVAVLLLDLDNFKHINDTLGHATGDLLIRSVAERLRTECRTCDTLARWGGDEFVLLLTD 717 Query: 462 -NDVSNITQIADELRNVV-SKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMD 517 +D+ N T ++ ++ +P + T SIGI+ G++ + LL A AM Sbjct: 718 LDDIQNTTSATEKFMALLTERPFATSECDINTTASIGIALYPQDGQDPETLLKRADTAMY 777 Query: 518 YIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEA 577 +KNG NG+ FFS + E + R + L+ A+ +++LVYQPQI + G+EA Sbjct: 778 EAKKNGRNGYHFFSLQLAEQAERRHRMEINLRSALKEGEMQLVYQPQIDLGKVRITGMEA 837 Query: 578 LARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLS 637 L RW P G + P+RFIPLAEE G I +G WV+ +ACRQ A W+ ++VNLS Sbjct: 838 LLRWQSPEEGTISPARFIPLAEETGLIYPLGEWVLQQACRQGAIWQKTEASPLCVAVNLS 897 Query: 638 ALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVD 697 A F L + + G+ H L +EITES+ +E+ + + L+ +GV S+D Sbjct: 898 AKQFHQPDLAKNIKKILRETGLSPHLLELEITESVFLENMEAAIEALTELKKLGVQFSID 957 Query: 698 DFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVE 757 DFGTG+S LS L LP+ IKI + FV T+ A+++A ++ +SL + ++AEGVE Sbjct: 958 DFGTGYSSLSYLKKLPIDRIKIAQEFVRDIDTDDGDKAIIKATIAMAKSLGMKLIAEGVE 1017 Query: 758 TKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI 799 +Q L C +QGY+F++P+PA+E+P ++ S K+ Sbjct: 1018 NHQQLAFLLLHGCHAMQGYYFAKPMPAQEVPSFIHSETCFKL 1059 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 52/320 (16%), Positives = 118/320 (36%), Gaps = 17/320 (5%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 K A ++G LE +++ + +++ N A++L+G + ++G + Sbjct: 374 KTLQALRQSEGTLKAMLESIADPIHMVDRDLNILWANDIAKQLFG---KNLVGQKCYAAL 430 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIW-TRFALSKVSAEGKV-YYL 119 R P P + H + S L + D + + ++ ++G+ L Sbjct: 431 HRSPTPCDP--MCHAIKAFSDGHAHSSENLFFDINDEERCFLVTANVASTDSQGQPSAVL 488 Query: 120 ALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYC-ISEASG 178 + RD + ++Q Q ++D P+++ D + + N+A +++GY E G Sbjct: 489 TISRDVTEIKKTQQQFHQAKWSIDASLTPMLMADLQGRLTYANQAALDLWGYAGEEEVLG 548 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 ++ E P RI + ++L + E + G ++ V D Sbjct: 549 KN---IVEFQEDPQRTRI-IMEILKARGVWRGEGRGKQKNGNGFDVELQAQVVKDQNGGP 604 Query: 239 QNLVMTFSDITEERQIRQLEGNI-----LAAMCSSPPFHEMGEIICRNIESVLNESHVSL 293 +++ + DIT++R+ + L + + + E+ + V L Sbjct: 605 LSILASAIDITDKRKTELQIKKLAYFDSLTGLPNRTLLKDHMELALGQARRLNKFVAVLL 664 Query: 294 FALRNGMPIHWASSSHGAEI 313 L N I+ ++ Sbjct: 665 LDLDNFKHINDTLGHATGDL 684 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 746 bits (1928), Expect = 0.0, Method: Composition-based stats. Identities = 201/826 (24%), Positives = 360/826 (43%), Gaps = 54/826 (6%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 T A + A +G+ + + + + ++ G V ++D + R Sbjct: 199 TAELQAREADLNRAQAVANVGSWVYDLVSGRIDMSAETCRILGLPTGTV--GSLDAFMAR 256 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDG-SKIWT-RFALSKVSAEGKVYY-LA 120 HP+ ++ A + G + +L G + W + A + EGK L Sbjct: 257 ----VHPDDRDTLQQAAAAALRGEPFDNELRLVFGETTRWITQRAEVEFDEEGKPLRSLG 312 Query: 121 LVRDASVEMAQK----EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 +D + + EQ + + + + VLD + + + ++ + FG + Sbjct: 313 TTQDITARKQLEASLREQKEFFRLISESIGEHIAVLDLQGQRLYNSPSYGQFFG-DTRDL 371 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 G ++ + R+ +Q + E+ L+ G + ++ + D Sbjct: 372 RGSDSFADVHPEDRERVKRV-FRQTTETGRGQEIEYRLVRNDGSVRHMASAGRVLGDRQG 430 Query: 237 HLQNLVMTFSDITEERQIRQLEGNILAAMCS--SPPFHEMGEIICRNIESVLNESHVSLF 294 +V+ D+TE +Q Q E A S + +I R ++ + + + Sbjct: 431 EAARVVVVSRDVTERKQAEQWERIAATAFESQQGMFITDANAVILRVNQAFTDITGYAAD 490 Query: 295 ALRNGMPIHWASSSHGAE--------IQNAQSWSATI--RQRDG----APAGILQIKTSS 340 P +S H A I+ W I R+++G I ++ Sbjct: 491 ECIGQTPKLLSSGRHDASFYAAMRESIERNGVWQGEIWNRRKNGDVFPEWLTISSVRDGD 550 Query: 341 GAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDK 400 G + ++ + D+S H + +++ I L +D +TGLPNR LH+ L + Sbjct: 551 GV-VTHYVSALTDMSAH--------KAAQEEIRHLAFYDALTGLPNRRLLHDRLRVAIAS 601 Query: 401 A----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFV 456 + + I +D+ + + D+LG+ D+ L +V R ++ + R+ G +FV Sbjct: 602 SVRSERQGALLFIDLDNFKTLNDTLGHDMGDRLLQQVGQRLSSSVREGDTVARLGGDEFV 661 Query: 457 LVS------LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGKNR--DYL 508 ++ E + +++ ++++P + + T S+GI+ G+ D L Sbjct: 662 VMLENLGERPEEAAGQSRIVGEKIIKLLNRPYDLSGHDYHNTPSVGITLFGGQQVGIDEL 721 Query: 509 LSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAE 568 + A AM + +G N +FF P M +V R + L+ A+ L YQPQ+ Sbjct: 722 MKRADLAMYEAKASGRNALRFFDPRMQAVVTARADIEKDLRAAVGRQSFFLAYQPQVD-A 780 Query: 569 TGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ-NI 627 +G++ G EAL RW G V P+ FIP+AEE G I +G WV+ AC Q A W ++ Sbjct: 781 SGQVIGAEALLRWQHQQRGTVSPAEFIPVAEETGLILPLGLWVLETACAQAALWAARPGR 840 Query: 628 HIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQIL 687 +SVN+SA FR +QV + G L +E+TESM++++ +I ++ L Sbjct: 841 ERFTVSVNVSARQFRQANFVDQVLAVLARSGAHPRNLKLELTESMLLDNVQDIIAKMSAL 900 Query: 688 RDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSL 747 + GVG S+DDFGTG+S LS L LP+ ++KID+SFV LT+ + I ++ ++L Sbjct: 901 KARGVGFSLDDFGTGYSSLSYLKQLPLDQLKIDQSFVRDLLTDPNDEVIARTIIALARTL 960 Query: 748 NLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 L+V+AEGVE+ EQ + L C QGY FSRPL + ++ Sbjct: 961 GLSVIAEGVESVEQQDALAAQGCLAYQGYLFSRPLALADFEAFLRR 1006 >UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N2J6_9GAMM Length = 1407 Score = 746 bits (1927), Expect = 0.0, Method: Composition-based stats. Identities = 207/830 (24%), Positives = 366/830 (44%), Gaps = 53/830 (6%) Query: 6 ADNAADGIFFPALEQNMMGAVLINE-NDEVMFFNPAAEKLWGYKREEVIG-NNIDMLIPR 63 A ++ + ++ + + + F + +L GY EE+ + LI Sbjct: 581 ALKDSEQFWSNVIQTLPDTVYVNDLFAKQTRFSSRHIGELLGYSSEELEEIEHWRQLIHP 640 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV---YYLA 120 D I + V+ + +L+ K+G+ RF S+E +V YY+ Sbjct: 641 DDVSKSDAAISQLKTMRPGEVKETTA--RLKHKNGNWRVIRFRDCIFSSETQVPAQYYVG 698 Query: 121 LVRDASVEMAQKEQT----RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 + RD + E K Q R+ + + + V L+ + + + + +M GY + Sbjct: 699 MARDITEEEDAKIQLSFSERRYRLLANGISDIVFTLNKKLELSYISASINKMLGYDSDQV 758 Query: 177 SGMQPDTLLNIPEFPA--DNRIRLQQLLWKTARDQDEFLLLTRT-----GEKIWIKASIS 229 L R QL + +D+ + G + ++ S Sbjct: 759 MREGLSLFLITESVNKLIQALERDLQLALSISSFKDQVRTMDLDAQTFSGVPVILEMQSS 818 Query: 230 PVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE---IICRNIESVL 286 + + ++ ++ T D+T+ R I +S M +I R + Sbjct: 819 ILRNESGAIEGILATCRDVTQRRFIEHEARTASEVFENSSEAIMMTTSTGLISRVNRAFT 878 Query: 287 NESHVSLFALRNGMPIHWASSSHGAE--------IQNAQSWSATI--RQRDG----APAG 332 + + + P + + + + W + R G + G Sbjct: 879 HLTGFDGQHVIGVNPKQFIAKDVSHQTMQDIRDALLVDGYWQGELDYINRKGEKHPSWTG 938 Query: 333 ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHN 392 + +K G S I +DI+ ++++ I+ L FDP+TGLPNR +H Sbjct: 939 VTALKDEMGQIQSHII-ISSDITH--------RKQTEARIQHLAYFDPLTGLPNRAQMHE 989 Query: 393 YLDDLVDKAV-SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIE 451 LD L+ K + I +D + + D++G+ DQ L EV +R +E + + RI Sbjct: 990 ALDRLMAKEESQLALLFIDLDRFKPINDTMGHPAGDQVLKEVASRLKEAVGAKNLVSRIG 1049 Query: 452 GTQFVLVS-----LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKN 504 G +F ++ E + I +++ + + + +P I+D+ L+ S+GI+ + + Sbjct: 1050 GDEFTVIMATLPETEQAIQTIIDVSERILHQMMQPFFIEDRQLYLSASVGIALYPENALS 1109 Query: 505 RDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQ 564 LL A AM + + G N +QF++ MNE ERL L L A+ ++ +L +Q Q Sbjct: 1110 GTDLLRNADTAMYHAKAMGKNNFQFYAEEMNEKAMERLELENNLHLALQRDEFELTFQAQ 1169 Query: 565 IFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRS 624 + + G+E L RWH P G V P +FIP+ EE G I IG WV+ AC Q+ +W+ Sbjct: 1170 WDIKHNCICGVETLLRWHRPDIGLVGPDKFIPIIEETGLIVPIGEWVLRRACEQIMDWQE 1229 Query: 625 QNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRI 684 IP L+VNLSA F+ Q+ +++ + G+D + +E+TES++M+ + Sbjct: 1230 AGYVIPKLAVNLSARQFKDAQMLDRICRIVDETGVDPELIELELTESILMDDIDRTLAVL 1289 Query: 685 QILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIG 744 R MG GLS+DDFGTG+S LS L PV+++KIDKSF+ + + I ++ Sbjct: 1290 NEARKMGFGLSIDDFGTGYSSLSYLKQFPVSQLKIDKSFIQNLPYNQEDGQITRTIVAMA 1349 Query: 745 QSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPG-WMSS 793 +L L V+AEGVE + Q + L+ I C +QGY +S P+PA+ ++ + Sbjct: 1350 NNLGLGVIAEGVENESQRQFLKTIGCYQVQGYMYSHPVPADLFAQDFLET 1399 Score = 53.1 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 57/417 (13%), Positives = 128/417 (30%), Gaps = 62/417 (14%) Query: 17 ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKR-EEVIGNNIDMLIPRDLRPAHPEY--- 72 AL + + ++F NP+A L G ++V+G + P D P + Sbjct: 315 ALSCIEEVVITTDYRGRIIFCNPSAMTLLGLNDCQQVVGKPLVQSFPFDGLPWLEKDQNL 374 Query: 73 ---------IRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVR 123 +++ + L +K S IW +S+ +A + ++ R Sbjct: 375 LKNKLRIVNYGDTLVDVSGQLKTFNISLYRPEKQNSCIWVLRDVSRQAANRDLLNVSRAR 434 Query: 124 ---------------DASVEMAQKEQTR--QLIIAVDHLDRPVIVLDPERHIVQCNRAFT 166 D S+ + EQ + + L +++ N + Sbjct: 435 YQALYDGCGVGMWHVDISLVRSWLEQLDGVSVEDYLKQYPDSFADLRSSYNLIDINASAV 494 Query: 167 EMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTAR-DQDEFLLLTRTGEKIWIK 225 M G + L + + + + + + A+ E + G K Sbjct: 495 SMHGGSNKQKFIEALKDLFLS--YNHELMQEMAEGIRQGAKSFSREVAFINAKGVK--NH 550 Query: 226 ASISPVYDVLAHLQNLVMTFSDITEERQIRQLEG-------------------NILAAMC 266 ++ D + Q +V +F DI + + N L A Sbjct: 551 YLVNATLDQVGQDQAIV-SFIDINDRIKAELALKDSEQFWSNVIQTLPDTVYVNDLFAKQ 609 Query: 267 SSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQ--SWSATIR 324 + +GE++ + E + H + + A+ S ++ + +A ++ Sbjct: 610 TRFSSRHIGELLGYSSEELEEIEHWRQLIHPDDVSKSDAAISQLKTMRPGEVKETTARLK 669 Query: 325 QRDGAPAGI----LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQ 377 ++G I + + ++ DI++ A ++ S + L Sbjct: 670 HKNGNWRVIRFRDCIFSSETQVPAQYYVGMARDITEEEDA-KIQLSFSERRYRLLAN 725 >UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Arthrospira RepID=B5VXY3_SPIMA Length = 1092 Score = 745 bits (1925), Expect = 0.0, Method: Composition-based stats. Identities = 188/810 (23%), Positives = 353/810 (43%), Gaps = 74/810 (9%) Query: 23 MGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKA 82 G+ +N N M + + G + + L H E + + Sbjct: 316 TGSWCLNMNTGEMIVSEQLYHILGLTP-----QPTSINFEQLLNQIHVEDLYGWVQNYAT 370 Query: 83 RV---EGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVR------------DASV 127 + + S ++ + D S W + VS + + Sbjct: 371 SLFVKQNYSLNYRIIQPDSSVHWVSQESTPVSDRHGQVTHIISTIKAIENPEIVNPSITA 430 Query: 128 EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI 187 E A +E +L + ++V++ + + N A +FG S+ G L+ I Sbjct: 431 EAALRESEARLRTIISTSTNGLVVVNRKGRALFINPAAEALFGRPASQLEG----ELIGI 486 Query: 188 PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSD 247 P ++ E +L + G+ ++ + + + + +D Sbjct: 487 PLV---------------TKESTELEILRQDGQLKIVRMRVVEI--SWEQETAYLASLTD 529 Query: 248 ITEERQIRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNESHVSLFA-----L 296 +T+ ++ A SP + + + E + + L Sbjct: 530 VTDFKKTEDQLKMFSRACDQSPVSIVITDSEGDIQYVNPKFEEITGYKAGEVIGQNPRIL 589 Query: 297 RNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG----ILQIKTSSGAETSAFIER 350 ++G +I + + WS ++++G I ++ G + FI Sbjct: 590 KSGYTTEPEYDVLWRQITSGKQWSGEFHNKKKNGELFWEHASICPMRDEEGY-ITHFIAV 648 Query: 351 VADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV----SPVV 406 DI+Q Q+ + + + +D +T LPNR + + L + +A + V Sbjct: 649 KEDITQ--------QKHNEEILAHQANYDALTDLPNRTLIFDRLRQAITEAQVHHSNVAV 700 Query: 407 YLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL-ENDVS 465 I +DH +++ D+LG+ D L E R R ++ + R+ G +F+L+ +D+ Sbjct: 701 MFIDLDHFKNINDTLGHELGDFLLKEAGMRLRGCIRKTDTVGRLGGDEFLLIIPKLDDLV 760 Query: 466 NITQIADELRNVVSKPIMIDDKPFPLTLSIGIS--YDLGKNRDYLLSTAHNAMDYIRKNG 523 IA+++ +V+ +P + + ++ SIGI+ GKN L+ A AM ++ G Sbjct: 761 QAEYIANQVLDVLGEPFNLCGEEAFISASIGIASYPQDGKNVSTLVRNADTAMYAAKQEG 820 Query: 524 GNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHD 583 N + FF+ MN+ + R+++ L+ AIS N+L +VYQP I T ++ G EAL RW++ Sbjct: 821 RNVFAFFTQNMNDEAQSRIIIENQLRHAISRNELSVVYQPFIHLNTSQIVGAEALMRWYN 880 Query: 584 PLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRS 643 P G++ P +FI +AEE I ++G W++++AC+++A W Q + ++VN+S R+ Sbjct: 881 PELGNIRPDQFIAIAEESRLIVDLGEWILSQACQEVANWHQQGNNGLWVAVNMSPRQLRT 940 Query: 644 NQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGF 703 L N + +A+ G+ L +EITE ++E + I+ L + + L++DDFGTG+ Sbjct: 941 PNLVNVIIEAIANNGLSSDCLELEITERSLVEEVPGVQSLIKQLNHLKIRLAIDDFGTGY 1000 Query: 704 SGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFE 763 S LS L P + +KIDKSF+ ++ +AL++ + ++ L L VVAEG+ET Q + Sbjct: 1001 SSLSYLKRFPFSVLKIDKSFISDLPDDQDAIALVKTMITMAHGLGLVVVAEGIETTAQLD 1060 Query: 764 MLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 L C QGY FS+PLP + ++ Sbjct: 1061 FLCNQGCDYGQGYLFSKPLPPAQFRAYLQR 1090 Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 101/255 (39%), Gaps = 23/255 (9%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A ++ + + G V++N +F NPAAE L+G ++ G I + + Sbjct: 433 ALRESEARLRTIISTSTNGLVVVNRKGRALFINPAAEALFGRPASQLEGELIGIPL---- 488 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDA 125 V S EL++ ++DG R + ++S E + YLA + D Sbjct: 489 ------------------VTKESTELEILRQDGQLKIVRMRVVEISWEQETAYLASLTDV 530 Query: 126 SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 + ++Q + A D +++ D E I N F E+ GY E G P +L Sbjct: 531 TDFKKTEDQLKMFSRACDQSPVSIVITDSEGDIQYVNPKFEEITGYKAGEVIGQNP-RIL 589 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 L + + + EF + GE W ASI P+ D ++ + + Sbjct: 590 KSGYTTEPEYDVLWRQITSGKQWSGEFHNKKKNGELFWEHASICPMRDEEGYITHFIAVK 649 Query: 246 SDITEERQIRQLEGN 260 DIT+++ ++ + Sbjct: 650 EDITQQKHNEEILAH 664 Score = 48.9 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 45/377 (11%), Positives = 117/377 (31%), Gaps = 47/377 (12%) Query: 16 PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRH 75 L + ++N+ +++F N A + ++ IP +L E Sbjct: 193 RILNAINLPIFILNQEHKIIFANRKAHETL----------VVNSQIPPELETWLRERSPQ 242 Query: 76 NREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLALVRDASVEMAQKE 133 + + + KD W L + ++ +A+ D + + + Sbjct: 243 IADTNISEIVAEIP----ITKDNITEWFCLRLYPIDSQDGSDFRAIAICEDITDSKLKAQ 298 Query: 134 QTRQLIIAVDH----LDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE 189 + + + L+ + + + G + + + + LLN Sbjct: 299 RQQLQQQHLAQVQALTKTGSWCLNMNTGEMIVSEQLYHILGLTP-QPTSINFEQLLNQIH 357 Query: 190 FPADN--RIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS- 246 L+ + ++ W+ +PV D + +++ T Sbjct: 358 VEDLYGWVQNYATSLFVKQNYSLNYRIIQPDSSVHWVSQESTPVSDRHGQVTHIISTIKA 417 Query: 247 ---------DITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALR 297 IT E +R+ E + + +S + R + +N + +LF Sbjct: 418 IENPEIVNPSITAEAALRESEARLRTIISTSTNGLVVVNRKGRAL--FINPAAEALFGRP 475 Query: 298 NGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGI-LQIKTSSGAETSAFIERVADISQ 356 G + +S I ++DG + +++ S + +A++ + D++ Sbjct: 476 ---ASQLEGELIGIPLVTKESTELEILRQDGQLKIVRMRVVEISWEQETAYLASLTDVTD 532 Query: 357 HMAALALEQEKSRQHIE 373 +K+ ++ Sbjct: 533 F--------KKTEDQLK 541 >UniRef50_Q2BPB1 Regulatory component of sensory transduction system n=2 Tax=Gammaproteobacteria RepID=Q2BPB1_9GAMM Length = 885 Score = 745 bits (1925), Expect = 0.0, Method: Composition-based stats. Identities = 187/693 (26%), Positives = 325/693 (46%), Gaps = 35/693 (5%) Query: 124 DASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDT 183 S ++ +E+ L +D L + + D E + CN+AF G+ ++ G D Sbjct: 199 HISRQILNRERG-LLRGLIDALPDHIFIKDKEGKYLGCNKAFQSFTGHQEADLIGKT-DQ 256 Query: 184 LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVM 243 + ++ Q++ E + G I +++ ++P D+ Q +V Sbjct: 257 DFSESNHAITDKSDTLQVINNLLPINREAWTHEQDGSPILLESQLAPFLDMDGEPQGIVG 316 Query: 244 TFSDITEERQIRQLEGNILAAMCSSPPFHEMG------EIICRNIESVLNESHVSLFA-- 295 DITE+R+ + + A+ SP + E + ESV S + Sbjct: 317 ISRDITEKRKAEERILTLSQAVEQSPVSVVITNLKGEVEYVNSTFESVTGYSQAEVLGKD 376 Query: 296 ---LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG----ILQIKTSSGAETSA 346 L++G + A++ +SW ++++G I + + G E Sbjct: 377 SSILKSGKTPPGRYADMWAKLVQGESWQGEFQNKKKNGEIFWEQAHIAPVLDAEG-EVRH 435 Query: 347 FIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS--- 403 F+ D+++ Q+ + I FD +T LPNR + L+ ++ +A Sbjct: 436 FLAVKQDVTK--------QKAQEEKILHQAHFDGLTELPNRFLAMHRLETMMHEAKRNQH 487 Query: 404 -PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLE 461 V + +D + V D+LG+ D+ L+E R + ++ + R+ G +F VL++ Sbjct: 488 QIAVLFLDMDDFKKVNDTLGHDMGDKILVEAAKRLQGSVRDSDTIGRLGGDEFIVLINHL 547 Query: 462 NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYI 519 IA L + ID + LT+SIGI+ G LL A +AM + Sbjct: 548 ERPEQALPIAQNLLQQFRSSLTIDGRDILLTMSIGIALYPGDGTTPSELLRNADSAMYHS 607 Query: 520 RKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALA 579 + G N + F++ MN RL L L A+ N+L+L+YQP + +T ++ G EAL Sbjct: 608 KAAGRNSFHFYTQEMNIEANRRLQLEEQLHNALDRNELRLLYQPVVDLKTRKIVGAEALL 667 Query: 580 RWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSAL 639 RW G + P FIP+AE G I IG++V+ +A R + W I +++NLS Sbjct: 668 RWDSKELGAISPEEFIPVAEHTGLIVEIGKFVLDDALRTTSRWIKTFIPDFHIAINLSPR 727 Query: 640 HFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDF 699 FR L + + ++++G++G L +EITE ++M ++ + I L G+ +S+DDF Sbjct: 728 QFRDPHLIDNIESFVNSYGLEGRNLELEITEGVLMSQHADVEEAIAKLTQKGISISMDDF 787 Query: 700 GTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETK 759 GTG+S LS L S P +K+D+SF++ + L L+ A + L L V+AEGVET+ Sbjct: 788 GTGYSSLSYLRSYPFNILKVDRSFINDISVDAADLELVNASIDMAHGLGLKVIAEGVETE 847 Query: 760 EQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 EQ +L + +C + QGY+FS+P+PA+E+ + Sbjct: 848 EQTALLLRKNCDMAQGYYFSKPIPADELEEILK 880 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 99/251 (39%), Gaps = 7/251 (2%) Query: 12 GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPE 71 G+ ++ + ++ + + N A + G++ ++IG H Sbjct: 210 GLLRGLIDALPDHIFIKDKEGKYLGCNKAFQSFTGHQEADLIGKTDQDF----SESNHAI 265 Query: 72 YIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKVY-YLALVRDASVEM 129 + + + ++RE ++DGS I L+ +G+ + + RD + + Sbjct: 266 TDKSDTLQVINNLLPINREAWTHEQDGSPILLESQLAPFLDMDGEPQGIVGISRDITEKR 325 Query: 130 AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE 189 +E+ L AV+ V++ + + + N F + GY +E G ++L + Sbjct: 326 KAEERILTLSQAVEQSPVSVVITNLKGEVEYVNSTFESVTGYSQAEVLGKD-SSILKSGK 384 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 P + L + Q EF + GE W +A I+PV D +++ + D+T Sbjct: 385 TPPGRYADMWAKLVQGESWQGEFQNKKKNGEIFWEQAHIAPVLDAEGEVRHFLAVKQDVT 444 Query: 250 EERQIRQLEGN 260 +++ + + Sbjct: 445 KQKAQEEKILH 455 Score = 74.7 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 8/143 (5%) Query: 3 LTDADNAADGIFF--PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 +T+ A + I A+EQ+ + V+ N EV + N E + GY + EV+G + +L Sbjct: 321 ITEKRKAEERILTLSQAVEQSPVSVVITNLKGEVEYVNSTFESVTGYSQAEVLGKDSSIL 380 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKV-YY 118 P + G++ E Q +KK+G W + ++ V AEG+V ++ Sbjct: 381 KSGKTPPGRYADMWAKLVQGES----WQGEFQNKKKNGEIFWEQAHIAPVLDAEGEVRHF 436 Query: 119 LALVRDASVEMAQKEQTRQLIIA 141 LA+ +D + + AQ+E+ Sbjct: 437 LAVKQDVTKQKAQEEKILHQAHF 459 >UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BF2_DECAR Length = 1038 Score = 745 bits (1925), Expect = 0.0, Method: Composition-based stats. Identities = 201/706 (28%), Positives = 320/706 (45%), Gaps = 45/706 (6%) Query: 118 YLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 LA+ + R+ +D L V +D N EM G+ E Sbjct: 335 MLAVAYLIRSKRLVGAALRERASLLDSLGEGVYGIDQNGQCTFINPKALEMLGWTADEVI 394 Query: 178 G--MQPDTLLNIPE--FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYD 233 G + P+ + Q L R Q E + G ++ S++P+ Sbjct: 395 GSDQHARFHHHRPDGSIYPSADCPVYQTLRDGQRRQGEEWFFNKDGRGFPVQYSVTPISR 454 Query: 234 VLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPP--FHEMGEIICRNIESVLNESHV 291 + V+TF DI+E R+ +L A + + I R + + Sbjct: 455 QEDK-EGAVVTFRDISEARKADELMRIAAIAFETQEAMLVTDAKSQILRVNRAFTEVTGY 513 Query: 292 SLFALRNGMPIHWASSSH--------GAEIQNAQSWSATI--RQRDGA----PAGILQIK 337 S P S H ++ W I R+++G I ++ Sbjct: 514 SAAEAIGQTPALLKSGYHEDSFYKDLWTSLKENGLWRGEIWNRRKNGEIYPEWLTISAVR 573 Query: 338 TSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDL 397 G E + F+ DI++ ++++ + I+ L +DP+T LPNR L+ L Sbjct: 574 GQHG-EITHFVSSFLDITK--------RKEAEEQIQFLALYDPLTHLPNRRLLNERLSKA 624 Query: 398 V----DKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGT 453 + + + I +D+ + + DS+G+ D L +V R RE ++ + + R+ G Sbjct: 625 LTSSGRQRRHAALLFIDLDNFKMINDSMGHDIGDLLLRQVALRLRESVRSNDTVSRLGGD 684 Query: 454 QFVLVSLENDVS------NITQIADELRNVVSKPIMIDDKPFPLTLSIG-ISYDLG-KNR 505 +FV++ E + I IA ++ + + +P + T SIG I + + Sbjct: 685 EFVILLEELSPNIHDATTQIEHIAQKMLDSLVQPYKFGEFSHHCTASIGAIPFMDATETI 744 Query: 506 DYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQI 565 + LL +A AM + G N FF PAM V+ R L L++A Q L QPQ+ Sbjct: 745 ESLLKSADMAMYKAKAAGKNRLFFFDPAMQTEVEARAALERDLRQAQREKQFVLYLQPQV 804 Query: 566 FAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ 625 ++G + G EAL RW P HG + P F +AEE I IG+WV+ EAC+QL W+ Sbjct: 805 D-QSGHVSGAEALIRWQHPTHGLILPGEFTHVAEETRLILPIGQWVLEEACKQLVIWQKN 863 Query: 626 -NIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRI 684 + L++N+SAL FR+ + V+ A+H G +L +EITES+++E +R+ Sbjct: 864 PDTAHLTLAINVSALQFRNPDFVDDVARAIHESGALASRLKLEITESLLLEDIDGTIERM 923 Query: 685 QILR-DMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSI 743 Q+L+ +GVGLS+DDFGTG+S LS L LP+ +IKID+SFV A+ EA+ ++ Sbjct: 924 QVLKNQLGVGLSLDDFGTGYSSLSYLKQLPLDQIKIDRSFVKDIHCNPNDAAIAEAVIAL 983 Query: 744 GQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPG 789 G+S +L V+AEGVET EQ + L C QGY F RP P + P Sbjct: 984 GRSFSLNVIAEGVETIEQRDALIARGCLTFQGYLFGRPGPIDAFPA 1029 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 57/248 (22%), Positives = 96/248 (38%), Gaps = 4/248 (1%) Query: 16 PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNN-IDMLIPRDLRPAHPEYIR 74 L+ G I++N + F NP A ++ G+ +EVIG++ + Sbjct: 357 SLLDSLGEGVYGIDQNGQCTFINPKALEMLGWTADEVIGSDQHARFHHHRPDGSIYPSAD 416 Query: 75 HNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA-EGKVYYLALVRDASVEMAQKE 133 + E KDG +++++ +S E K + RD S E Sbjct: 417 CPVYQTLRDGQRRQGEEWFFNKDGRGFPVQYSVTPISRQEDKEGAVVTFRDISEARKADE 476 Query: 134 QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPAD 193 R IA + ++V D + I++ NRAFTE+ GY +EA G P LL Sbjct: 477 LMRIAAIAFE-TQEAMLVTDAKSQILRVNRAFTEVTGYSAAEAIGQTP-ALLKSGYHEDS 534 Query: 194 NRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQ 253 L L + + E + GE +IS V + + V +F DIT+ ++ Sbjct: 535 FYKDLWTSLKENGLWRGEIWNRRKNGEIYPEWLTISAVRGQHGEITHFVSSFLDITKRKE 594 Query: 254 IRQLEGNI 261 + + Sbjct: 595 AEEQIQFL 602 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 745 bits (1924), Expect = 0.0, Method: Composition-based stats. Identities = 163/568 (28%), Positives = 280/568 (49%), Gaps = 44/568 (7%) Query: 247 DITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWAS 306 D T++ + + + + EII +N + + H F Sbjct: 334 DSTQKIE-------FVNPAFTHMTGYTAEEIIGKNPNVLKSGHHDETF-----------Y 375 Query: 307 SSHGAEIQNAQSWSATI--RQRDGAPAG---ILQIKTSSGAETSAFIERVADISQHMAAL 361 ++ W I R+++G + + + + + +DI+ Sbjct: 376 KHMYTVLEAQDYWQGEIWNRRKNGEIYPEWLTINVIRDDTGDITQYAAIFSDIT------ 429 Query: 362 ALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA----VSPVVYLIGVDHIQDV 417 E++K+ + I+ L FD +T LPNR + L + A + + +D + + Sbjct: 430 --ERKKTEERIKNLAYFDVLTALPNRRLFTDRLQIAIANAHRHGQQLAIMFLDLDLFKRI 487 Query: 418 IDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEND-VSNITQIADELRN 476 DSLG+ DQ L+E R ++ + R+ G +F ++ E D + ++ ++A+ + Sbjct: 488 NDSLGHGVGDQVLVETAARISHCVREGDTVARLGGDEFTVLLPELDHLEDVAKLAERVIA 547 Query: 477 VVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAM 534 V +P ++DD +T SIGI+ + G + L+ A AM + G N +Q ++ AM Sbjct: 548 HVKQPFLVDDNELYVTTSIGIAVYPEDGTTVEALIKNADTAMYRAKDLGRNSYQLYTAAM 607 Query: 535 NEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRF 594 N ERL + ++L+ A++ + +LVYQ ++ +E G + G+EAL RWH P G V P F Sbjct: 608 NARSFERLTMESSLRHALTREEFRLVYQVKVDSEDGRMSGVEALVRWHHPEMGLVSPVDF 667 Query: 595 IPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAM 654 IPLAE +G I +IG WV+ ACRQ W + ++VN+SA F +P V+ A+ Sbjct: 668 IPLAEAMGVISDIGEWVLRTACRQCKHWMDLGLPPVRIAVNVSAQQFVETDVPEVVARAL 727 Query: 655 HAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPV 714 G+ L +E+TE+++M+ E+ ++ LR MGV +S+DDFGTG+S LS L +P+ Sbjct: 728 RETGLPPQYLELELTETVLMQRVDEVVAVLKSLRAMGVRISIDDFGTGYSSLSYLKRMPI 787 Query: 715 TEIKIDKSFVDRCLTE-----KRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIH 769 +K+D+SFV+ + ++ I ++ +L L +AEGVET EQ E LR Sbjct: 788 DALKVDRSFVNDIFDGQSKVTEDGAEIVSTIINLAHNLKLKAIAEGVETPEQAEFLRSKG 847 Query: 770 CRVIQGYFFSRPLPAEEIPGWM-SSVLP 796 C +QGY SRP+ E++ ++LP Sbjct: 848 CDEVQGYLISRPVSGEDLISLFDRNLLP 875 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 75/206 (36%), Gaps = 12/206 (5%) Query: 89 RELQLEKKDGSKIWTRFALSKVSAEGKVYYL-----ALVRDASVEMAQKEQTRQLIIAVD 143 R + + + DG + + S + A + Y+ AL + + ++ ++ Sbjct: 266 RHIGITRMDGELV-GLLSFSDILATLQYEYVHRLDEALKERDAALLRSRKDLNLARKVIE 324 Query: 144 HLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLW 203 ++++D + I N AFT M GY E G P +L + +L Sbjct: 325 ASLDGIMIVDSTQKIEFVNPAFTHMTGYTAEEIIGKNP-NVLKSGHHDETFYKHMYTVLE 383 Query: 204 KTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGN--- 260 Q E + GE +I+ + D + FSDITE ++ + N Sbjct: 384 AQDYWQGEIWNRRKNGEIYPEWLTINVIRDDTGDITQYAAIFSDITERKKTEERIKNLAY 443 Query: 261 --ILAAMCSSPPFHEMGEIICRNIES 284 +L A+ + F + +I N Sbjct: 444 FDVLTALPNRRLFTDRLQIAIANAHR 469 Score = 76.6 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 54/144 (37%), Gaps = 8/144 (5%) Query: 15 FPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIR 74 +E ++ G ++++ ++ F NPA + GY EE+IG N ++L +++ Sbjct: 320 RKVIEASLDGIMIVDSTQKIEFVNPAFTHMTGYTAEEIIGKNPNVLKSGHHDETFYKHMY 379 Query: 75 HNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYLALVRDASVEMAQK 132 E E+ +K+G W + + Y A+ D + + Sbjct: 380 TVLEAQDY----WQGEIWNRRKNGEIYPEWLTINVIRDDTGDITQYAAIFSDITERKKTE 435 Query: 133 EQTRQL--IIAVDHLDRPVIVLDP 154 E+ + L + L + D Sbjct: 436 ERIKNLAYFDVLTALPNRRLFTDR 459 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 744 bits (1923), Expect = 0.0, Method: Composition-based stats. Identities = 202/790 (25%), Positives = 346/790 (43%), Gaps = 52/790 (6%) Query: 41 AEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGM-----------SR 89 L G+ G +++ +P + + G+ + E Sbjct: 452 VTSLSGHSLRHANGPALELFMPDQTAAGLESWSPFDVIAGENQRETFLSLLVEEKNIDEY 511 Query: 90 ELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQ----LIIAVDHL 145 EL L W++ ++ VS +G+ L L ++ +E R A+D L Sbjct: 512 ELLLRLPGAPCFWSQVSVRPVSYQGEQALLTLFTPINLRKHLEEGVRNEKAFSQAALDSL 571 Query: 146 DRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKT 205 +L + I+ NR F + + + G ++ FP D R +++ ++ Sbjct: 572 PGIFFMLGSDFRILSTNRNFDR---FRETTSPGSPFSSI--ELHFPPDQREKIRSMVQGG 626 Query: 206 ARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLE---GNIL 262 R ++ G ++ +L L+ DI+ R+ G + Sbjct: 627 FRRGAAEAEVSLQGSSSREIYLLTSRLFLLGGEDCLITVGIDISARRRAEATLELWGRVF 686 Query: 263 AAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSH--------GAEIQ 314 S + + I ++ + + + S H I+ Sbjct: 687 ECTSESIMITDAAQRIVSVNQAFCATTGYRAEEIIGQSSLALRSDVHDGIYFRQLWRGIR 746 Query: 315 NAQSWSATI--RQRDGAPAGILQIKT---SSGAETSAFIERVADISQHMAALALEQEKSR 369 SW R ++G + + + +I DIS Q+ Sbjct: 747 KRGSWQGEFWCRHKNGEVSPQWMVVNTVHDRQGTVTNYIALFTDISA--------QKSQE 798 Query: 370 QHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAW 425 Q I+ + D +T LPNR L + +A V I +DH +++ DSLG+ Sbjct: 799 QRIQHIAHHDALTNLPNRLLCMERLILALQQAHRNGRHVAVIFIDLDHFKNINDSLGHHV 858 Query: 426 ADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIAD-ELRNVVSKPIM 483 D L+ NR ++ + R+ G +FV++ + D I +I L ++ +P Sbjct: 859 GDCVLVTAANRLSMGVRDGDTVSRLGGDEFVIILADIEDSHQIEEIMKHRLLPLMRQPYD 918 Query: 484 IDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKER 541 + SIGIS + G ++D LL A AM ++ G N + F++ +N +R Sbjct: 919 AGGYELHCSCSIGISIFPEDGLDKDTLLRNADTAMYRAKEVGRNNYHFYTEELNSRAMQR 978 Query: 542 LVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEI 601 L + +L++ I N+L L YQP++ TG+ YG+EAL RW P HG + P FIP+AEE Sbjct: 979 LSIETSLRKGIERNELLLHYQPKLDLHTGKPYGLEALLRWQHPDHGMISPMEFIPIAEET 1038 Query: 602 GEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDG 661 G I IG+ VI ACRQL+ W S + LS+N+SA+ FR + + + G+ Sbjct: 1039 GLIIPIGKQVIRNACRQLSRWSSVGMSHICLSLNVSAVQFRDRRFVEDLVQLVREEGVSP 1098 Query: 662 HQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDK 721 H++ +E+TE+M+ME + ++ L+D G S+DDFGTG+S L+ L P+ +KID+ Sbjct: 1099 HRIELELTETMLMEDAVRTIRVMETLKDEGFLFSIDDFGTGYSSLNYLHRFPIDCLKIDR 1158 Query: 722 SFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRP 781 SF+ L LA+++AI +G +L++ V+AEGVE ++++ LR C IQGYF +RP Sbjct: 1159 SFIRGMLERPADLAIIKAIIGLGHTLDMQVIAEGVEKEDEYRALRAAGCDGIQGYFVARP 1218 Query: 782 LPAEEIPGWM 791 L E++P W+ Sbjct: 1219 LTPEQVPEWL 1228 Score = 63.5 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 43/129 (33%), Gaps = 6/129 (4%) Query: 13 IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEY 72 ++ E ++ + ++ N A GY+ EE+IG + L H Sbjct: 681 LWGRVFECTSESIMITDAAQRIVSVNQAFCATTGYRAEEIIGQSSLAL----RSDVHDGI 736 Query: 73 IRHNREGGKARVEGMSRELQLEKKDG--SKIWTRFALSKVSAEGKVYYLALVRDASVEMA 130 G + E K+G S W Y+AL D S + + Sbjct: 737 YFRQLWRGIRKRGSWQGEFWCRHKNGEVSPQWMVVNTVHDRQGTVTNYIALFTDISAQKS 796 Query: 131 QKEQTRQLI 139 Q+++ + + Sbjct: 797 QEQRIQHIA 805 >UniRef50_A0YYE1 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensors n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YYE1_9CYAN Length = 1090 Score = 743 bits (1918), Expect = 0.0, Method: Composition-based stats. Identities = 188/724 (25%), Positives = 330/724 (45%), Gaps = 41/724 (5%) Query: 106 ALSKVSAEGKVYYLALVRDASVEMAQK---EQTRQLIIAVDHLDRPVIVLDP---ERHIV 159 + + S + + A+ + +A++ E + A++ +I+ D + I+ Sbjct: 358 SSRQFSGDDIHFIQAIANIIATAVARQQSTESLYLMERAINASSNGIIITDATETDHPII 417 Query: 160 QCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTG 219 N F + GY E L P+ + RL+ L + + + G Sbjct: 418 YVNAGFERITGYSKEEVIEQNC-RFLQGPQTDSSLVERLRTALLQGRECRVVIQNYRKDG 476 Query: 220 EKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIR---QLEGNILAAMCSSPPF----- 271 W I+PV++ HL + + +DITE + + + N L M P Sbjct: 477 RLFWNDLQIAPVFNDRGHLTHFIGVQNDITERYEAQEEVRQTRNFLQTMIDHLPVAVFVK 536 Query: 272 HEMGEIICRNIESVLNESHVSLFALRN----GMPIHWASSSHGAEIQNAQSWSATIRQRD 327 E + R + N++ LF L G ++ AE + Q A + Sbjct: 537 EAYQEKLGRF--RLWNKACEQLFGLSAVEVLGKTVYDVFPPEQAEFFHQQD-QAVLSAGK 593 Query: 328 GAPAGILQIKTSSGAETSAFIERVADISQH--------MAALALEQEKSRQHIEQLIQFD 379 +++T + + +V ++ + + +++++ + +D Sbjct: 594 VLDIPEERVETQTLGQRILHTVKVPLLNHYPDTEYLLCIGEDITKRKQAEDQLRHHAFYD 653 Query: 380 PMTGLPNRNNLHNYLDDLVDKAVS-----PVVYLIGVDHIQDVIDSLGYAWADQALLEVV 434 +T LPNR N L + + V + +D+ + V DSLG+ DQ L+ + Sbjct: 654 TLTNLPNRALFLNRLAHSIKQVQQTSGELFAVLFLDLDNFKRVNDSLGHQIGDQLLIAIA 713 Query: 435 NRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTL 493 R L+ L R+ G +F ++ + N++++ ++A L + P + + Sbjct: 714 RRLEGCLRSRDTLARLGGDEFTILLEQINNITDAIKVARHLHQQLMLPFNLSGNEVFTNV 773 Query: 494 SIGISYD---LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKE 550 SIGI+ ++ + LL A +AM ++ G + F M+ ERL L + L+ Sbjct: 774 SIGIALSCSRHEQHPEELLQNADSAMYRAKEMGKGAYAVFDTRMHRQAVERLQLESQLRR 833 Query: 551 AISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRW 610 A+ N+ ++ YQP + TGE+ G EAL RW +P G + P+ FIP+AEEIG I IG+W Sbjct: 834 ALELNEFQVYYQPIVSITTGEVIGFEALIRWLNPYKGFISPALFIPVAEEIGLISKIGQW 893 Query: 611 VIAEACRQLAEWRSQN--IHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEI 668 V+ +AC QL WR Q +SVNLS+ R L Q+ + G+ H L +EI Sbjct: 894 VLYQACEQLQVWRKQFPLFKNLTVSVNLSSQQLREPDLLEQIDQVLATTGLPSHCLKLEI 953 Query: 669 TESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCL 728 TES+++E+ + K ++ ++D + LS+DDFGTG+S LS L P+ +KID+SFV R Sbjct: 954 TESLLIENYDQALKILRQIQDRNIQLSLDDFGTGYSSLSYLHRFPINTLKIDRSFVKRLK 1013 Query: 729 TEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIP 788 A+++AI + +L + +AEG+ET Q E L+ + C QG+ FS+ L A++I Sbjct: 1014 QNHENTAIIKAILRLANALAMNTIAEGIETVFQLEKLKGLGCEYGQGHLFSKALDAQDIT 1073 Query: 789 GWMS 792 +S Sbjct: 1074 HLLS 1077 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 64/379 (16%), Positives = 133/379 (35%), Gaps = 25/379 (6%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDE---VMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 + + A+ + G ++ + + +++ N E++ GY +EEVI N L Sbjct: 386 STESLYLMERAINASSNGIIITDATETDHPIIYVNAGFERITGYSKEEVIEQNCRFLQGP 445 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYYLAL 121 + E +R G+ +Q +KDG W ++ V +++ + Sbjct: 446 QTDSSLVERLRTALLQGREC----RVVIQNYRKDGRLFWNDLQIAPVFNDRGHLTHFIGV 501 Query: 122 VRDASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDPE----RHIVQCNRAFTEMFGYCI 173 D + +E+ RQ L +DHL V V + N+A ++FG Sbjct: 502 QNDITERYEAQEEVRQTRNFLQTMIDHLPVAVFVKEAYQEKLGRFRLWNKACEQLFGLSA 561 Query: 174 SEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYD 233 E G + + ++ L D E + T+T + + P+ + Sbjct: 562 VEVLGKTVYDVFPPEQAEFFHQQDQAVLSAGKVLDIPEERVETQTLGQRILHTVKVPLLN 621 Query: 234 VLAHLQNLVMTFSDITEERQIRQLEGN-----ILAAMCSSPPFHEMGEIICRNIESVLNE 288 + L+ DIT+ +Q + L + + F + ++ E Sbjct: 622 HYPDTEYLLCIGEDITKRKQAEDQLRHHAFYDTLTNLPNRALFLNRLAHSIKQVQQTSGE 681 Query: 289 SHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFI 348 LF + + S G +I + Q A R+ +G + G E + + Sbjct: 682 LFAVLFLDLDNFKR--VNDSLGHQIGD-QLLIAIARRLEGCLRSRDTLARLGGDEFTILL 738 Query: 349 ERVADISQHMAALALEQEK 367 E++ +I+ + ++ Sbjct: 739 EQINNITDAIKVARHLHQQ 757 Score = 57.0 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 50/407 (12%), Positives = 107/407 (26%), Gaps = 72/407 (17%) Query: 37 FNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKK 96 N A GY E++ + + D + A + +G + + E + + Sbjct: 129 VNAAFVNTLGYTEAELLSVPLWEFVHPDDQAATKAELAEIAQGKPS----FNFENRYRCR 184 Query: 97 DGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQ----KEQTRQLIIAVDHLDRPVIVL 152 DG W + + EG +Y A+ RD + + + Q + Sbjct: 185 DGDYRWLSWTSAPFVQEGLLY--AVARDVTEYKHSVAQLQSRIEQQATVAQLGQYALSQT 242 Query: 153 DPERHIVQC--------NRAFTEMF---------------GYCISEASGMQPDTLLNI-- 187 + ++ + + N F ++ G+ + T + Sbjct: 243 NLDQLLTEISTLVAQTLNVHFVKILELLPNGSAFLLKAGVGWSSGLVGYARISTASHSHA 302 Query: 188 ------------PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWI-KASISPVYDV 234 + + R + + LL +++ E + Sbjct: 303 GYTLAHKQPVVVEDLRVETRFKGEPLLHNHRIVSGMSVIIGEEDEPYGVLSLYSRSSRQF 362 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEII-------------CRN 281 + + ++I RQ L M + G II Sbjct: 363 SGDDIHFIQAIANIIATAVARQQSTESLYLMERAINASSNGIIITDATETDHPIIYVNAG 422 Query: 282 IESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSA-TIR------QRDGAPAG-- 332 E + S + + S E R ++DG Sbjct: 423 FERITGYSKEEVIEQNCRFLQGPQTDSSLVERLRTALLQGRECRVVIQNYRKDGRLFWND 482 Query: 333 -ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQF 378 + + + FI DI++ A E ++R ++ +I Sbjct: 483 LQIAPVFNDRGHLTHFIGVQNDITERYEAQE-EVRQTRNFLQTMIDH 528 Score = 52.4 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 19/119 (15%), Positives = 39/119 (32%), Gaps = 5/119 (4%) Query: 135 TRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADN 194 ++ + + E + + N AF GY +E + ++ P+ A Sbjct: 103 IQERDRFFSLSLDLLCIASFEGYFQRVNAAFVNTLGYTEAELLSVPLWEFVH-PDDQAAT 161 Query: 195 RIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQ 253 + L ++ E R G+ W+ + +P L D+TE + Sbjct: 162 KAELAEIAQGKPSFNFENRYRCRDGDYRWLSWTSAPFVQEG----LLYAVARDVTEYKH 216 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 743 bits (1918), Expect = 0.0, Method: Composition-based stats. Identities = 219/869 (25%), Positives = 363/869 (41%), Gaps = 102/869 (11%) Query: 16 PALEQNMMGAVLINENDEVMFF--NPAA------EKLWGYKREEVI-------------- 53 L+ ++ + N A E L G + +EV+ Sbjct: 134 ATLDAIPDLLFEMDGEGRYLAVHANREAQLQRPVEALLGRRVDEVLPAPAAQTCLAALAE 193 Query: 54 --------GNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRF 105 G I++ I + R +GG A +SR++ ++ + + Sbjct: 194 AGRHGWSSGQQIEITIDNQPQWFELSVARKADDGGPAHFIVLSRDITARRRAEASVQ--- 250 Query: 106 ALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAF 165 LS++ A A+VR AS + ++ ++ + + +LD +V A Sbjct: 251 RLSRLYATLSQCNQAIVRCASQDDLLRQICHDAVVFGEMKMVWIGLLDERDGMVH--PAA 308 Query: 166 TEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLW------------------KTAR 207 G + + D+ P+ + +RL + +W + Sbjct: 309 AYGDGTEYLDGIRIAFDSASPFGRGPSGSALRLDKPVWCQDFANDPATSAWHERGARHGY 368 Query: 208 DQDEFLLLTRTGEKIWIK--ASISPVYDVLAHLQNLVMTFSDIT---EERQIRQLEGNIL 262 L L R G+ + + A + LV DI + + + Sbjct: 369 RASAALPLHRGGKVFGVLNLYAGECHAFDEAAQRLLVEMAMDIDFALDRFEQDAERARLA 428 Query: 263 AAMC-SSPPFHEMGEIICRNIESVLNESHVS----------------------------- 292 AA+ S + E+ E I I +V E+ Sbjct: 429 AAIVDSEEKYRELTESINDVIWTVDPETRCFSYVSPAMRRLSGYAPHELIDAPIERLLKP 488 Query: 293 --LFALRNGMPIHWASSSHGAEIQNAQSWS-ATIRQRDGAPAGILQIKTSSGAETSAFIE 349 + +R M +H A G S + +RDG + T S +E Sbjct: 489 EYVAEMRERMALHLAEFHVGKRKSEDYSVEEVELGRRDGGTVWAEVVTTLGLNRRSGRVE 548 Query: 350 RVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV----DKAVSPV 405 + +A E+ + I++L +D +TGLPNR+ + + + Sbjct: 549 F-----RAVARDISERRAAEAEIQRLAHYDQLTGLPNRSLVKDRFRYAASLTQRRRGQLA 603 Query: 406 VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVS 465 V +DH +++ D+LG+ + D+ L+EV R L+ +CR+ G +FV + + D Sbjct: 604 VMFFDLDHFKNINDTLGHDFGDRLLVEVARRLESVLRGGDTVCRLGGDEFVFLLPDTDAE 663 Query: 466 NITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNG 523 ++A +L V++P+++D + +T SIGI+ D G + D L A AM ++ G Sbjct: 664 GAARVAAKLLEAVAQPLVLDHQELTVTPSIGIAMYPDDGTDFDTLSRNADAAMYQAKREG 723 Query: 524 GNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHD 583 NG++FF+ AM L+L AL+ A+ Q L YQPQ+ G + G EAL RW Sbjct: 724 RNGFRFFTEAMQARSTRTLLLANALRHALDRGQFSLHYQPQVSLADGRVVGAEALLRWTH 783 Query: 584 PLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRS 643 P G V P F+P+AE G I IG WV+ EA Q W + + ++VNLSA FR+ Sbjct: 784 PEFGPVSPGEFVPIAESNGLIAQIGEWVLREAVAQSRRWLDEGLPPLVMAVNLSAAQFRN 843 Query: 644 NQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGF 703 LP VS + G+ HQ+ +E+TE++ M+ + + L G+ +S+DDFGTG+ Sbjct: 844 PNLPELVSQVIEEAGLPPHQVELELTEAVAMDDPQSAVRVMDALFARGIRMSIDDFGTGY 903 Query: 704 SGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFE 763 S L L V ++KID+SFV + A++ AI + SL + VAEGVET +Q + Sbjct: 904 SSLGYLKRFKVGKLKIDQSFVRDIGDDPDDKAIVSAIIHLAGSLGMLTVAEGVETLDQLD 963 Query: 764 MLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 LR+ C +QGY+FSRPLPAE G++ Sbjct: 964 FLRQQGCDTVQGYYFSRPLPAEAFVGYLQ 992 Score = 63.5 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 63/162 (38%), Gaps = 9/162 (5%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDE-VMFFNPAAEKLWGYKREEVIGNNIDML 60 +L A ++ + E ++ + +PA +L GY E+I I+ L Sbjct: 426 RLAAAIVDSEEKYRELTESINDVIWTVDPETRCFSYVSPAMRRLSGYAPHELIDAPIERL 485 Query: 61 IPRDLRPAHPEYI---RHNREGGKARVEGMSR-ELQLEKKDGSKIWTRF--ALSKVSAEG 114 + + E + GK + E S E++L ++DG +W L G Sbjct: 486 LKPEYVAEMRERMALHLAEFHVGKRKSEDYSVEEVELGRRDGGTVWAEVVTTLGLNRRSG 545 Query: 115 KVYYLALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDP 154 +V + A+ RD S A + + ++L + L +V D Sbjct: 546 RVEFRAVARDISERRAAEAEIQRLAHYDQLTGLPNRSLVKDR 587 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 45/143 (31%), Gaps = 3/143 (2%) Query: 122 VRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 R + + RQL +D + + +D E + + + G + Sbjct: 116 ARVRARTRELEGVNRQLGATLDAIPDLLFEMDGEGRYLAVHANREAQLQRPVEALLGRRV 175 Query: 182 DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNL 241 D +L P A + + + + +T + W + S++ D + Sbjct: 176 DEVLPAP--AAQTCLAALAEAGRHGWSSGQQIEITIDNQPQWFELSVARKAD-DGGPAHF 232 Query: 242 VMTFSDITEERQIRQLEGNILAA 264 ++ DIT R+ + Sbjct: 233 IVLSRDITARRRAEASVQRLSRL 255 >UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4D8_9PROT Length = 1138 Score = 742 bits (1917), Expect = 0.0, Method: Composition-based stats. Identities = 181/708 (25%), Positives = 310/708 (43%), Gaps = 49/708 (6%) Query: 124 DASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDT 183 +A + +E Q +H V V D I N F ++ Y E G Sbjct: 436 EAHSKRIAEELQYQKFALDEHAI--VSVTDVTGTITDVNERFCQISQYSREELIGKN-HK 492 Query: 184 LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVM 243 +LN P + + + + DE + G W+ ++ P D + Sbjct: 493 MLNSGWHPKGFFKAMYRAITRGQVWNDEVCNRAKDGSLYWLDMTVVPFMDECGKPYKYIG 552 Query: 244 TFSDITEERQ----IRQLEGNILAAMCSSPPFHEMGEII--------------CRNIESV 285 +DITE ++ I + E + S+ M ++ C E + Sbjct: 553 IRTDITERKKSAEAIERSEAKLHILFDSNSDAVLMLDMQGFFDCNKAALRLFGCATTEEL 612 Query: 286 LNESHVSLF--ALRNGMPIHWASSSHGAEIQNAQSWSATIRQR---DGAPAGILQIKTSS 340 + NG+ ++ + A + + G + +S Sbjct: 613 CKHHPADMSPATQPNGIDSLTLANEYIATATRDGNAQFEWLHKRMDSGQSFPADVLLSSM 672 Query: 341 GAETSAFI-ERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD 399 + + V DI+ E++KS I +L +DP+TGLPNR L + L + Sbjct: 673 KLDGRVVLQATVRDIT--------ERKKSESEIVRLAFYDPLTGLPNRRLLMDRLQHALT 724 Query: 400 KAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF 455 + + I +D+ + + D+ G+A D L+EV R + ++ + + R+ G +F Sbjct: 725 SNLRNDKHGAILFIDLDNFKSLNDTKGHAVGDLLLVEVAQRLKGCVREEDTVARLGGDEF 784 Query: 456 VLVSL------ENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDY 507 V++ +N ++ ++A+++ ++ M+ + + SIG++ + D Sbjct: 785 VVLLDNLSHGHDNAGAHTKRVAEKILQALNLSYMLQGYEYHSSPSIGVALFCADASSPDE 844 Query: 508 LLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFA 567 LL A +AM + G N +F+ ++ R L AL A+ QL L YQ Q+ Sbjct: 845 LLKRADSAMYQSKAAGRNTVRFYDERTQALLLARAELEHALHHALEQQQLMLYYQVQVN- 903 Query: 568 ETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNI 627 + G E L RW P+ G + P++FIPLAEE G I IG WV+ +AC QL W S Sbjct: 904 ADYQPVGAEVLLRWFHPVLGMISPAQFIPLAEESGMIIPIGYWVLEQACDQLKRWASDVF 963 Query: 628 H-IPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQI 686 L+VN+S F +V + GI +L +EITESM++ I +Q Sbjct: 964 KCDLVLAVNVSIRQFHEADFAQKVQALVTDSGISPDRLKLEITESMLVHDVENIIATMQQ 1023 Query: 687 LRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQS 746 L+ +G+ S+DDFGTG+S LS + LP+ ++KID+SFV ++ A++ I ++ QS Sbjct: 1024 LKKIGLNFSMDDFGTGYSSLSSIKRLPLDQLKIDQSFVRDIGHDEHDKAIVRTIIAMAQS 1083 Query: 747 LNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 + L ++AEG+ET++Q +L C QGY FS+P+P + G +S Sbjct: 1084 MKLNIIAEGIETEQQRRLLALKGCTNYQGYLFSKPVPLSDFEGLLSRA 1131 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 87/265 (32%), Gaps = 19/265 (7%) Query: 9 AADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPA 68 A + + + + + N ++ Y REE+IG N ML Sbjct: 443 AEELQYQKFALDEHAIVSVTDVTGTITDVNERFCQISQYSREELIGKNHKMLNSG----W 498 Query: 69 HPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAE-GKVY-YLALVRDAS 126 HP+ R + + E+ KDGS W + E GK Y Y+ + D + Sbjct: 499 HPKGFFKAMYRAITRGQVWNDEVCNRAKDGSLYWLDMTVVPFMDECGKPYKYIGIRTDIT 558 Query: 127 VEMAQKEQTRQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPD 182 E + L I D V++LD + CN+A +FG +E Sbjct: 559 ERKKSAEAIERSEAKLHILFDSNSDAVLMLDMQGFF-DCNKAALRLFGCATTEELCKHHP 617 Query: 183 TLLNIPEFPADNRIRLQQLLW-----KTARDQDEFLLLTRT-GEKIWIKASISPVYDVLA 236 ++ P + + Q E+L G+ +S + + Sbjct: 618 ADMSPATQPNGIDSLTLANEYIATATRDGNAQFEWLHKRMDSGQSFPADVLLSSMK-LDG 676 Query: 237 HLQNLVMTFSDITEERQIRQLEGNI 261 + L T DITE ++ + Sbjct: 677 RVV-LQATVRDITERKKSESEIVRL 700 Score = 54.3 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 59/170 (34%), Gaps = 14/170 (8%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 K +A ++ + N ++++ N AA +L+G E + + + Sbjct: 562 KSAEAIERSEAKLHILFDSNSDAVLMLDMQG-FFDCNKAALRLFGCATTEELCKHHPADM 620 Query: 62 PRDLRP-------AHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEG 114 +P EYI G A+ E L G LS + +G Sbjct: 621 SPATQPNGIDSLTLANEYIATATRDGNAQFEW----LHKRMDSGQSFPADVLLSSMKLDG 676 Query: 115 KVYYLALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIVQCN 162 +V A VRD + + + +L + L +++D +H + N Sbjct: 677 RVVLQATVRDITERKKSESEIVRLAFYDPLTGLPNRRLLMDRLQHALTSN 726 >UniRef50_Q1GXN7 Diguanylate cyclase/phosphodiesterase n=3 Tax=Proteobacteria RepID=Q1GXN7_METFK Length = 951 Score = 742 bits (1917), Expect = 0.0, Method: Composition-based stats. Identities = 212/815 (26%), Positives = 381/815 (46%), Gaps = 47/815 (5%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNN------ 56 + D + + + + + +++ +F + E ++G E +G Sbjct: 132 MLDKLQEQELQYRQLVMNSPDIFIRYDQDCRRIFLSDGYEAVFGVPAAEALGRKPTEVWG 191 Query: 57 IDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV 116 M+ P D E +R E EL+ + + A+ + + +G++ Sbjct: 192 RPMMRPEDFEARLREVMRSGEE--------QEIELEWVGDEHYVCQSLHAVPERNVKGEI 243 Query: 117 -YYLALVRDAS----VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY 171 L + RD S VE +++ R +++ V + D ++ N A+ E G Sbjct: 244 KGVLTITRDISHIRRVERELRKRERYQSALIENFPFVVWLKDLNSKLLAANSAYAEFAGV 303 Query: 172 CISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV 231 + + D L + + +++L + R GEK WI+A SP+ Sbjct: 304 ASKDELEGKTDFDLFPLQDARTHVEGDKRVLQSGQPSHSVLQVTKRNGEKAWIEAYKSPM 363 Query: 232 YDVLAHLQNLVMTFSDITEERQIR----QLEGNILAAMCSSPPFHEMGEIICRNIESVLN 287 V + V F DIT+ +Q Q E + + + ++P ++ R + +N Sbjct: 364 V-VDGKVMGTVGFFRDITDIKQNEEKLIQRERELQSLIDNTPDTIIRYDLNARRL--YVN 420 Query: 288 ESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQR-DGAPAGILQIKTSSGAETSA 346 + + +G I S + + + IR + A L++ + + Sbjct: 421 TPKLKRIGIESGRLIGTTPSEYPGG-EAYMKYEEKIRGVINSATPDFLELHGKADNGNTW 479 Query: 347 FIER-----VADISQHMAALALEQE-----KSRQHIEQLIQFDPMTGLPNRNNLHNYLDD 396 FI + Q + LA+E++ + R+ I L +D +TGLPNR + ++ Sbjct: 480 FIHVRIVPEFGEQGQVIGVLAVERDITELMEYRERIHYLAYYDALTGLPNRTLFADRVNQ 539 Query: 397 LVDKA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEG 452 ++ A + ++ +D ++V D+LG+ D L+ V R ++ + R+ G Sbjct: 540 VLADASWHEQRFGLMMLDLDRFKEVNDTLGHQAGDDLLVAVAQRLNASVRSYDTIARLSG 599 Query: 453 TQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLL 509 +F ++ E + ++ IA ++ + ++KP +I DK ++ SIGI+ D G +R L Sbjct: 600 DEFAILLPELRNPDDLATIARKINDEIAKPFLIHDKELFISTSIGIAIYPDDGDDRATLF 659 Query: 510 STAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAET 569 +A AM + + G N +QF+S + E ++LGA++++A+ N + +L YQPQ+ + Sbjct: 660 KSADVAMYHAKNYGRNNYQFYSRELGSKASEYIMLGASIRQALKNAEFELFYQPQVDLMS 719 Query: 570 GELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRS--QNI 627 GE+ G EAL RW +P G V P RFI +AEE G I IG WV+ EAC + + Sbjct: 720 GEIVGAEALLRWRNPQLGVVMPDRFIKVAEESGLIVEIGEWVLREACSAVVCLNRYRPDD 779 Query: 628 HIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQIL 687 H +++VNLS+ F N L V D + G L +EITES+++E EI + Sbjct: 780 HPLSMAVNLSSRQFLYNDLLASVKDILAETGCKPEWLKLEITESLLLEDSQEIISTLSTF 839 Query: 688 RDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSL 747 ++MG+ +S+DDF TG+S +S L P++++KID+SFV ++ L L+ AI I +L Sbjct: 840 KEMGITISIDDFCTGYSAMSYLGQFPISQVKIDRSFVRDIAAKQDKLELITAIIRIAHAL 899 Query: 748 NLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPL 782 L +VAEGVE+K+Q +L+ C + QGYFF +P+ Sbjct: 900 RLELVAEGVESKQQANLLKIQGCTIAQGYFFGKPM 934 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 54/385 (14%), Positives = 127/385 (32%), Gaps = 33/385 (8%) Query: 12 GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPE 71 + A+ + ++ + + + N AA ++ GY + ++ + +I Sbjct: 18 DMLSFAINRIREIVLVCDADARICLANLAACEVLGYSEKLLLQMSATDIITHLDSVGWKN 77 Query: 72 YIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVE--- 128 R ++ M +E L + G + + + Y + L RD + Sbjct: 78 DWRRLQQQ-----HVMVQETSLRNQAGDTVPVEIQSNYFVDADQAYCVLLGRDLTARFDM 132 Query: 129 -MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI 187 +EQ Q V + I D + + + + +FG +EA G +P + Sbjct: 133 LDKLQEQELQYRQLVMNSPDIFIRYDQDCRRIFLSDGYEAVFGVPAAEALGRKPTEVWGR 192 Query: 188 P-EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 P P D RL++++ + E + + P +V ++ ++ Sbjct: 193 PMMRPEDFEARLREVMRSGEEQEIELEWVG-DEHYVCQSLHAVPERNVKGEIKGVLTITR 251 Query: 247 DITEERQIRQL---EGNILAAMCSSPPFHEMGEIICRNI----------------ESVLN 287 DI+ R++ + +A+ + PF + + + + + Sbjct: 252 DISHIRRVERELRKRERYQSALIENFPFVVWLKDLNSKLLAANSAYAEFAGVASKDELEG 311 Query: 288 ESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTS--SGAETS 345 ++ LF L++ H + + +R+G A I K+ + Sbjct: 312 KTDFDLFPLQDART-HVEGDKRVLQSGQPSHSVLQVTKRNGEKAWIEAYKSPMVVDGKVM 370 Query: 346 AFIERVADISQHMAALALEQEKSRQ 370 + DI+ ++ R+ Sbjct: 371 GTVGFFRDITDIKQNEEKLIQRERE 395 Score = 55.4 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 39/264 (14%), Positives = 88/264 (33%), Gaps = 25/264 (9%) Query: 132 KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFP 191 Q L A++ + V+V D + I N A E+ GY M ++ Sbjct: 14 ATQIDMLSFAINRIREIVLVCDADARICLANLAACEVLGYSEKLLLQMSATDIIT--HLD 71 Query: 192 ADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEE 251 + + L + E L + G+ + ++ + D V+ D+T Sbjct: 72 SVGWKNDWRRLQQQHVMVQETSLRNQAGDTVPVEIQSNYFVDAD--QAYCVLLGRDLTAR 129 Query: 252 ----RQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWA-S 306 ++++ E + +SP + CR I L++ + ++F + + + Sbjct: 130 FDMLDKLQEQELQYRQLVMNSPDIFIRYDQDCRRI--FLSDGYEAVFGVPAAEALGRKPT 187 Query: 307 SSHGAEIQNAQSWSATIRQ--RDGAPAGIL------------QIKTSSGAETSAFIERVA 352 G + + + A +R+ R G I + I+ V Sbjct: 188 EVWGRPMMRPEDFEARLREVMRSGEEQEIELEWVGDEHYVCQSLHAVPERNVKGEIKGVL 247 Query: 353 DISQHMAALALEQEKSRQHIEQLI 376 I++ ++ + + + R+ Sbjct: 248 TITRDISHIRRVERELRKRERYQS 271 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 742 bits (1916), Expect = 0.0, Method: Composition-based stats. Identities = 162/503 (32%), Positives = 255/503 (50%), Gaps = 11/503 (2%) Query: 297 RNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVA---D 353 R+ W Q + +DG+ L +K + D Sbjct: 247 RDIAQSMWDIDIATKTNQQTYEVELDLMHKDGSLHTYLMVKFPLRGKEGKVFGVCTIGTD 306 Query: 354 ISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLI 409 IS+ A +E+ + + + D +T LPNR+ ++ + + +A + L+ Sbjct: 307 ISERKLAENALREQ-QSRLNYMAFHDALTSLPNRSLFYDRIYHGLARARRSNSRVALMLL 365 Query: 410 GVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL-ENDVSNIT 468 +D + V DSLG+ D L + R E ++ + R+ G +FV+V +DV ++ Sbjct: 366 DIDRFKIVNDSLGHDAGDILLKAIAMRLTEGVRDMDTVARLGGDEFVVVLEGIHDVDDVI 425 Query: 469 QIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNG 526 +A++L +S+P+ I T+SIG+S + G + D LL A AM ++ G N Sbjct: 426 FVANKLLATLSRPLDISGHSISATVSIGVSIFPEDGADTDELLKNADIAMYKAKEAGKNN 485 Query: 527 WQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLH 586 QF++ MN L+L L+ AI NQL L YQPQI +TG++ G+EAL RW P Sbjct: 486 CQFYTKGMNATAVNYLLLENDLRRAIEQNQLALYYQPQIDLKTGDMTGVEALVRWQHPER 545 Query: 587 GHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQL 646 G V P+ FIPLAEE G I IG WV+ EAC+Q W ++ ++VNLS FR Sbjct: 546 GLVSPAHFIPLAEETGLIVPIGEWVLREACKQKKIWLDTGKNVGKVAVNLSPRQFRQKNF 605 Query: 647 PNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGL 706 P +V + G++ L +EITES MEH E ++ L MG L++DDFGTG+S L Sbjct: 606 PGKVEAILQETGLEAKYLELEITESCAMEHAGETINQLNQLNQMGTFLAIDDFGTGYSSL 665 Query: 707 SRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLR 766 + L P+ ++KID+SF+ + A+ + I + ++ L VVAEGVET+ Q E LR Sbjct: 666 AYLQRFPIQKLKIDRSFIHDIHDDANDAAIAKTIIGLAHNMQLRVVAEGVETESQAEWLR 725 Query: 767 KIHCRVIQGYFFSRPLPAEEIPG 789 C +QG+ +++P+ A+++ Sbjct: 726 AKGCDQVQGFLYAKPMTAKQLES 748 Score = 53.5 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 21/156 (13%), Positives = 44/156 (28%), Gaps = 2/156 (1%) Query: 123 RDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPD 182 R E A L + + + V D + ++V + F M S G Sbjct: 183 RHRLAEQALWASETYLNAILHYSPALISVKDLDGNVVLASDHFKHMADIDESGFVGKNVF 242 Query: 183 TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 + + I + + E L+ + G P+ + + Sbjct: 243 DVFPRDIAQSMWDIDIATKT-NQQTYEVELDLMHKDGSLHTYLMVKFPLRGKEGKVFGVC 301 Query: 243 MTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEII 278 +DI+E + + + FH+ + Sbjct: 302 TIGTDISERKLAENALRE-QQSRLNYMAFHDALTSL 336 Score = 43.5 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 51/142 (35%), Gaps = 6/142 (4%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A A++ L + + + + V+ + + + +G N+ + PRD+ Sbjct: 190 ALWASETYLNAILHYSPALISVKDLDGNVVLASDHFKHMADIDESGFVGKNVFDVFPRDI 249 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI-WTRFALSKVSAEGKVYYLA-LVR 123 + + K + EL L KDGS + EGKV+ + + Sbjct: 250 AQSMWDI----DIATKTNQQTYEVELDLMHKDGSLHTYLMVKFPLRGKEGKVFGVCTIGT 305 Query: 124 DASVEMAQKEQTRQLIIAVDHL 145 D S + R+ ++++ Sbjct: 306 DISERKLAENALREQQSRLNYM 327 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 741 bits (1913), Expect = 0.0, Method: Composition-based stats. Identities = 164/565 (29%), Positives = 265/565 (46%), Gaps = 32/565 (5%) Query: 250 EERQIRQLEGNILAAMCSSPPFHEMGEIICR------NIESVLNESHVSLFA-----LRN 298 E +Q + A+ S + ++ + + + ++ Sbjct: 298 ERKQSEVFMRKLSQAVEQSSNAIIITDLNGTIEYANTTFSTNTGYALHDIIGKKPNMHKS 357 Query: 299 GMPIHWASSSHGAEIQNAQSWSATI--RQRDGAP----AGILQIKTSSGAETSAFIERVA 352 G + A + +SW R+ +G + ++ + G + ++ Sbjct: 358 GKTSRATYADMWAHLGRGESWQGEFINRRHNGEERIDLVRVSPVREADGR-ITHYLAIEE 416 Query: 353 DISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA----VSPVVYL 408 DI+ Q+ ++ IE L FD +TGLPNR L + A + V Sbjct: 417 DITN--------QKNAQARIESLAHFDVLTGLPNRALLDERAQRALRLAEEDQATLAVMF 468 Query: 409 IGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNIT 468 + +DH +++ D+LG+ D L+E+ R R L+ D L R+ G +FVL+ + + Sbjct: 469 LDLDHFKNINDTLGHNLGDTLLVELAQRLRAVLRRDDTLSRLGGDEFVLLLPGANRESAK 528 Query: 469 QIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNG 526 +IA EL +++P I + SIGI+ G + + L A AM ++ G N Sbjct: 529 KIAQELMRAINEPYRIGSHELNVMASIGIAVYPADGMDFETLCKNADVAMYRAKQEGRNA 588 Query: 527 WQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLH 586 ++ F+ M L + AL++AI+ QL + YQPQI +G++ G EAL RWH P Sbjct: 589 YRSFTQEMQAYSTRYLQVLNALRQAIAQEQLHVHYQPQISLISGDVIGAEALLRWHHPEL 648 Query: 587 GHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQL 646 G++ P+ FIP+AEE G I IG WV+ A Q +W + ++VNLSA+ FR L Sbjct: 649 GNISPAEFIPIAEESGLILQIGEWVLRVAVAQAKKWHQLGLDKLIIAVNLSAVQFRHAGL 708 Query: 647 PNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGL 706 PN V + L +E+TE + M + L + GV +S+DDFGTG+S L Sbjct: 709 PNLVMQILKEEDFPPQYLELELTEGVAMHDPQGAIAMMNSLHERGVRMSIDDFGTGYSSL 768 Query: 707 SRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLR 766 S L ++KID+SFV T+ A++ AI + ++L L +AEGVET EQ LR Sbjct: 769 SYLKQFKAYKLKIDQSFVRDISTDAEDKAIVSAIIGMAKNLGLQTIAEGVETAEQQAFLR 828 Query: 767 KIHCRVIQGYFFSRPLPAEEIPGWM 791 + C QGY +S+PLPA + ++ Sbjct: 829 EEGCHEAQGYHYSKPLPAADFETFI 853 Score = 84.3 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 61/168 (36%), Gaps = 2/168 (1%) Query: 127 VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 + R+L AV+ +I+ D I N F+ GY + + G +P+ + Sbjct: 298 ERKQSEVFMRKLSQAVEQSSNAIIITDLNGTIEYANTTFSTNTGYALHDIIGKKPNMHKS 357 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 + + L + Q EF+ GE+ +SPV + + + + Sbjct: 358 G-KTSRATYADMWAHLGRGESWQGEFINRRHNGEERIDLVRVSPVREADGRITHYLAIEE 416 Query: 247 DITEERQIRQLEGNILA-AMCSSPPFHEMGEIICRNIESVLNESHVSL 293 DIT ++ + ++ + + P + + + + E +L Sbjct: 417 DITNQKNAQARIESLAHFDVLTGLPNRALLDERAQRALRLAEEDQATL 464 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 48/130 (36%), Gaps = 6/130 (4%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 A+EQ+ ++ + N + + N GY ++IG +M A + Sbjct: 309 LSQAVEQSSNAIIITDLNGTIEYANTTFSTNTGYALHDIIGKKPNMHKSGKTSRATYADM 368 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKV-YYLALVRDASVEMAQ 131 R E E + +G + +S V A+G++ +YLA+ D + + Sbjct: 369 ----WAHLGRGESWQGEFINRRHNGEERIDLVRVSPVREADGRITHYLAIEEDITNQKNA 424 Query: 132 KEQTRQLIIA 141 + + L Sbjct: 425 QARIESLAHF 434 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 740 bits (1911), Expect = 0.0, Method: Composition-based stats. Identities = 173/571 (30%), Positives = 282/571 (49%), Gaps = 32/571 (5%) Query: 237 HLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFAL 296 ++ F + E I E IL + +I + V+ +S L Sbjct: 494 EMEMAASVFKESAEAIVICDSEDKILRVNPAFY------KITGYSQIEVVGQSPQLL--- 544 Query: 297 RNGMPIHWASSSHGAEIQNAQSWSATI--RQRDG----APAGILQIKTSSGAETSAFIER 350 ++ PI + A ++ W + +++G + ++ +K +G +T I Sbjct: 545 QSDRPIQSMLHNREAALKKNDIWQCEVSGYRKNGEHFLSWQTVIPVKDENG-DTQQIIYI 603 Query: 351 VADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VV 406 +DI+ E++ +HI L D +T LPNR ++ +++A V Sbjct: 604 FSDIT--------ERKLFEEHIYNLAHHDSLTQLPNRVAFQLQMNTALERAKRSKTQMAV 655 Query: 407 YLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSN 466 I +DH + + D+ G+ D L +V RF+ L+ + + R G +F ++ N Sbjct: 656 MFIDLDHFKMINDTSGHPVGDLLLQQVAERFKRALRKEDVISRFGGDEFTVLLSNTRTDN 715 Query: 467 ITQI-ADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNG 523 T + A +L +P + ++ SIGI D G + D L+ A +AM ++ G Sbjct: 716 ATTVVARKLLACFYEPFKLPSSEVVISASIGIGVFPDNGDSVDSLMMNADSAMYRAKEKG 775 Query: 524 GNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHD 583 N +QF++ MN+ +ERL L L++A+ ++ L YQPQ G + G EAL RW Sbjct: 776 RNCFQFYTKEMNQYAQERLELELDLRKALERDEFVLHYQPQFD-PNGRIIGCEALIRWQH 834 Query: 584 PLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRS 643 P G + P FI +AE G I IG+WVI AC Q W SQ +SVNLS F Sbjct: 835 PDKGLLSPGEFINMAEITGLIVPIGKWVIDTACMQHKMWLSQGYPALNISVNLSGRQFLH 894 Query: 644 NQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGF 703 + L V +A+ GI L +E+TES+MM + E + + + +G+ +S+DDFGTG+ Sbjct: 895 HDLLETVKNAITTSGITPSCLELELTESIMMVNVEETIRTLNAISSLGIHMSIDDFGTGY 954 Query: 704 SGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFE 763 S +S L PV ++KID+SFV +K +A++++I + +LNLTV+AEGVET EQ E Sbjct: 955 SSMSCLKRFPVNKLKIDQSFVRGLPQDKEDVAIVKSIIVMAHALNLTVIAEGVETLEQLE 1014 Query: 764 MLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 L+ C QGY+FSRP+ A +I ++ ++ Sbjct: 1015 FLKSSRCEEFQGYYFSRPILAADIEQYLQAL 1045 Score = 90.5 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 51/138 (36%), Gaps = 1/138 (0%) Query: 127 VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 + ++ +++ D E I++ N AF ++ GY E G P L + Sbjct: 487 QRQSTHKEMEMAASVFKESAEAIVICDSEDKILRVNPAFYKITGYSQIEVVGQSPQLLQS 546 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 + R + L K Q E + GE ++ PV D Q ++ FS Sbjct: 547 DRPIQSMLHNR-EAALKKNDIWQCEVSGYRKNGEHFLSWQTVIPVKDENGDTQQIIYIFS 605 Query: 247 DITEERQIRQLEGNILAA 264 DITE + + N+ Sbjct: 606 DITERKLFEEHIYNLAHH 623 Score = 60.8 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 48/126 (38%), Gaps = 6/126 (4%) Query: 16 PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRH 75 +++ V+ + D+++ NPA K+ GY + EV+G + +L + + H Sbjct: 500 SVFKESAEAIVICDSEDKILRVNPAFYKITGYSQIEVVGQSPQLLQSDRPIQS----MLH 555 Query: 76 NREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYLALVRDASVEMAQKE 133 NRE + + E+ +K+G W K + + D + +E Sbjct: 556 NREAALKKNDIWQCEVSGYRKNGEHFLSWQTVIPVKDENGDTQQIIYIFSDITERKLFEE 615 Query: 134 QTRQLI 139 L Sbjct: 616 HIYNLA 621 >UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Comamonadaceae RepID=A1W8G6_ACISJ Length = 756 Score = 740 bits (1911), Expect = 0.0, Method: Composition-based stats. Identities = 192/720 (26%), Positives = 316/720 (43%), Gaps = 61/720 (8%) Query: 130 AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYC-ISEASGMQPDTLLNIP 188 A + R+ +D ++ + R +V+CN+ E+FG +A G + L Sbjct: 35 AMQRVLREQQTLLDSAGVGIVFI-RNRALVRCNQRCAEIFGLPSPEDAIGRSSEALHPSR 93 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 + L + + E L G+ W + + + + + DI Sbjct: 94 GAFRELGRAAYPTLARGQAYRTERQLKRCDGQLFWAHLTGRLI-NPRDSREGSIWIIDDI 152 Query: 249 TEERQIRQLEGNIL--------AAMCSSPPFHEMGEIIC-RNIESVLNESHVSLFA---- 295 E+++ + L +AM E C R+ E +L L Sbjct: 153 DEQKRAQAQLQAALWEKQVLFDSAMVGIVFLQERRMTRCNRHFEQILGYGPGELAGSSSR 212 Query: 296 --LRNGMPIHWASSSHGAEIQNAQSWSAT--IRQRDGAPAGILQIKT---SSGAETSAFI 348 + H A A + Q++ +R RDG A ++++ I Sbjct: 213 RWYLSDEDWHEAGVRCYAPLVQGQAFEGQMVLRTRDGR-AIECEVRSKAVDPSNVAQGSI 271 Query: 349 ERVADISQHMAAL-------------------------------ALEQEKSRQHIEQLIQ 377 V D+S+ + ++++ ++ I + Sbjct: 272 WIVMDVSERLRIQRQLAGMHGELEQQVRDRTRELQETVGNLHREIQDRQRDQERIYWMAH 331 Query: 378 FDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEV 433 +D +T LPNR L D + +A V + +D+ + V DSLG+ D L+E+ Sbjct: 332 YDALTELPNRVLLAERGQDAIRQAQESGAPLAVMFLDLDNFKHVNDSLGHRIGDALLVEI 391 Query: 434 VNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTL 493 R R ++ + R+ G +FVL+ + ++A +++ +P+ I L L Sbjct: 392 AQRLRTTVRQRDTVARLGGDEFVLLLPGANAQGAARVAAKMQEAALQPVHIQHHELSLAL 451 Query: 494 SIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEA 551 S+GI+ + G + + L+ +A AM + +G N ++FF+P M L L AL+ A Sbjct: 452 SMGIALFPEHGSDFETLIQSADTAMYRAKADGRNSFRFFTPTMQAQSARALQLTNALRRA 511 Query: 552 ISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWV 611 + NQL L YQPQ+ TG + G+EAL RWH P G V P+ FIP+AE+ G+I IG WV Sbjct: 512 LERNQLSLHYQPQVSIATGRVCGVEALLRWHHPELGAVSPAEFIPVAEDTGQILPIGEWV 571 Query: 612 IAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITES 671 + A QL W SQ + ++VNLSA+ FR QL V + +G+ H L +E+TE+ Sbjct: 572 LRTALAQLRTWHSQGLPALTMAVNLSAVQFRQPQLLELVDRLLAEYGVQPHLLELELTEN 631 Query: 672 MMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEK 731 + + + L GV LS+DDFGTG+S LS L + +KID+SFV + Sbjct: 632 VAVADPHAAIATMDQLHAKGVRLSMDDFGTGYSSLSHLKRFQIYRLKIDQSFVRDLDHDG 691 Query: 732 RILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 A++ AI + Q+L + AEGVET Q LR+ C QG++FSRPL A + ++ Sbjct: 692 NDRAIVSAIIRMAQALGMRTTAEGVETAHQLTFLREQGCDEAQGFYFSRPLGAPHLQQYL 751 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 111/295 (37%), Gaps = 17/295 (5%) Query: 18 LEQNMMGAVLINENDEVMFFNPAAEKLWGY-KREEVIGNNIDMLIPRDLRPAHPEYIRHN 76 L+ +G V I N ++ N +++G E+ IG + + L P R A E R Sbjct: 47 LDSAGVGIVFI-RNRALVRCNQRCAEIFGLPSPEDAIGRSSEALHPS--RGAFRELGRAA 103 Query: 77 REGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKVYYLALVRDASVEMAQKEQT 135 AR + E QL++ DG W + + + + ++ D + + Q Sbjct: 104 YPTL-ARGQAYRTERQLKRCDGQLFWAHLTGRLINPRDSREGSIWIIDDIDEQKRAQAQL 162 Query: 136 RQLI----IAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFP 191 + + + D ++ L ER + +CNR F ++ GY E +G E Sbjct: 163 QAALWEKQVLFDSAMVGIVFL-QERRMTRCNRHFEQILGYGPGELAGSSSRRWYLSDEDW 221 Query: 192 ADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEE 251 + +R L + + + +L TR G I + V D Q + D++E Sbjct: 222 HEAGVRCYAPLVQGQAFEGQMVLRTRDGRAIECEVRSKAV-DPSNVAQGSIWIVMDVSER 280 Query: 252 RQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWAS 306 +I++ + + ++ + E+V N R+ I+W + Sbjct: 281 LRIQRQLAGMHGELEQ-----QVRDRTRELQETVGNLHREIQDRQRDQERIYWMA 330 Score = 56.2 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 75/253 (29%), Gaps = 22/253 (8%) Query: 18 LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNR 77 + M+G V + + + N E++ GY E+ G++ D H +R Sbjct: 173 FDSAMVGIVFL-QERRMTRCNRHFEQILGYGPGELAGSSSRRWYLSD-EDWHEAGVRCYA 230 Query: 78 EGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEG-KVYYLALVRDASVEMAQKEQTR 136 + + ++ L +DG I V + +V D S + + Q Sbjct: 231 PLVQGQA--FEGQMVLRTRDGRAIECEVRSKAVDPSNVAQGSIWIVMDVSERLRIQRQLA 288 Query: 137 QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRI 196 + ++ + R E G E Q D D Sbjct: 289 GMHGELEQ------------QVRDRTRELQETVGNLHREIQDRQRDQERIYWMAHYDALT 336 Query: 197 RLQQLLWKTARDQDEFLLLTRTGEKIWIKA----SISPVYDVLAHLQNLVMTFSDITEER 252 L + R QD +G + + + V D L H +I + Sbjct: 337 ELPNRVLLAERGQDAIRQAQESGAPLAVMFLDLDNFKHVNDSLGHRIG-DALLVEIAQRL 395 Query: 253 QIRQLEGNILAAM 265 + + + +A + Sbjct: 396 RTTVRQRDTVARL 408 >UniRef50_C1D1W4 Putative diguanylate-cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D1W4_DEIDV Length = 856 Score = 740 bits (1911), Expect = 0.0, Method: Composition-based stats. Identities = 212/851 (24%), Positives = 367/851 (43%), Gaps = 80/851 (9%) Query: 9 AADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKR--EEVIGNNIDMLIPRDLR 66 + + I+ +E + L+ +V + +P+ GY + V L+ R+ Sbjct: 17 SGELIYRLLIEHSTDLIALLGAEGQVQYLSPSVHAHLGYNDSCDSVANKFAYQLVHREDW 76 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFAL-SKVSAEGKVYYLALVRDA 125 P + I R GG+A +E ++ G W + + + L VRD Sbjct: 77 PTLIKRIHDTRPGGRAALE----PFRVRHAYGHWCWMEGTVVNLLEHPDIRANLLAVRDV 132 Query: 126 SV----EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 + + +T++ ++ + VLD + V N + G E G Sbjct: 133 TETVRVKAELLARTQEYTDLLESITDAFYVLDRDWRFVYVNTYAQRLLGKSAEELLGQVK 192 Query: 182 DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNL 241 + + I ++ + + E ++W +A + P + L Sbjct: 193 WEVFP-ESVDSLVGIHYREAMRSGVPQKFEVHYEPL---ELWAEAHLYP------SARGL 242 Query: 242 VMTFSDITEERQIRQLEG---NILAAMCSSPPFHEMGEIICRNIESVLNESHVSLF---- 294 ++F DI+ + + E IL P ++ + +E S+ Sbjct: 243 SVSFQDISARKATERAERQRSRILELTVQGTPLEQVLHEVALLVEQQCPGVLCSVLLRQE 302 Query: 295 ----------------ALRNGMPIHWASSSHGA-----------EIQNAQSW-------- 319 +G+ I S G +I + +W Sbjct: 303 DRLFTAAAPSLPDTYSRAIDGLLIGPDQGSCGTSAFSREPVVTHDIAASPAWAQFRELAG 362 Query: 320 --------SATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQH 371 S + G G + SGA + A ++ +AALA+ + Sbjct: 363 IHGLCSCMSLPVLDEHGEVLGTFALYERSGAMSGAAHMDQLVRARDLAALAMRHHQLTAQ 422 Query: 372 IEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWAD 427 + Q D +TGLPNR+ L ++++++ + + +D + V D++G+ D Sbjct: 423 LRHQAQHDALTGLPNRSLFTERLAEILEQSERSRASTALLFVDLDEFKGVNDTVGHHVGD 482 Query: 428 QALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDK 487 L V +R + + R+ G +F LV + + +A + N +++P ++ + Sbjct: 483 YVLQAVADRLLGCARRGDVVARVGGDEFTLVLPFAEEPHAITVARRVLNELTRPFVVQGR 542 Query: 488 PFPLTLSIGISYDL--GKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLG 545 F L SIGIS G++ LL A AM ++ +G+ F +N+ + RL L Sbjct: 543 AFHLGASIGISVSPQAGRDGQTLLRHADLAMYRAKRE-KSGFAVFEAQLNQQAQLRLQLA 601 Query: 546 AALKEAISN--NQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGE 603 + L+EA+ L+L YQPQ+ G++ G EAL RW P G V P++FIP+AE+ G Sbjct: 602 SDLREALREPGANLELHYQPQVRLHDGQVVGAEALVRWRHPHLGMVSPAQFIPVAEDTGM 661 Query: 604 IENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQ 663 I +G WV+ EACRQ W + ++VN+SAL F + VS + A G++ + Sbjct: 662 IVPLGTWVMEEACRQAVAWAAAGHGAMRVAVNVSALQFARPDFVDTVSATLRATGLEAGR 721 Query: 664 LTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSF 723 L VE+TES +ME E +R++ LR +GV ++VDDFGTG+S LS L LP+ +KID++F Sbjct: 722 LEVELTESAVMEDVKESVERMERLRALGVSVAVDDFGTGYSSLSYLQRLPLNVLKIDRTF 781 Query: 724 VDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLP 783 + ++++AI + Q LNL VAEGVET ++ E L ++ CR QG+FF++PLP Sbjct: 782 IQNLGVNATSRSVVQAIVGLAQHLNLECVAEGVETPDEREALIEVGCRYAQGFFFAKPLP 841 Query: 784 AEEIPGWMSSV 794 A + W+S Sbjct: 842 APALLEWLSQA 852 >UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7K0U5_VIBSE Length = 815 Score = 739 bits (1910), Expect = 0.0, Method: Composition-based stats. Identities = 191/767 (24%), Positives = 342/767 (44%), Gaps = 40/767 (5%) Query: 51 EVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSR--ELQLEKKDGSKI----WTR 104 EV+ D P DL +H + + G + L L D W Sbjct: 57 EVVVQVADQFTPTDLTISHISFGQQTLSIGPIWLPNGDLFAVLALTHPDDQITVVSAWLS 116 Query: 105 FALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRA 164 + ++S + +Y + A L +D L+ + + + NR+ Sbjct: 117 ALVGRMSFDVSSHYQ--QERTRHQTAATTPLPTLQEFIDCLEDHIWIKGMDGLYSMTNRS 174 Query: 165 FTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWI 224 + SE G L + + T +E + W+ Sbjct: 175 VENAWQKTNSEIIGKDDFALFSHERAEKFIEADNLVVATGTLNIVEECRQIDENNNPTWL 234 Query: 225 KASISPVYDVLAHLQNLVMTFSDITEERQIRQLEG---NILAAMCSSPPFHEMGEIICRN 281 + SPV D +L ++ +IT + + I + I Sbjct: 235 ETIKSPVRDNDGNLIGILGMTRNITRRKMVETQLSLASKIFNNSQEGMVITDRNANIIDV 294 Query: 282 IESVLNESHVSLFALRNGMPIHWASSSH--------GAEIQNAQSWSATI--RQRDGAPA 331 + + + P S H +++ W R++DG+ Sbjct: 295 NTAFTQITGYRSEEVIGKNPRILRSGHHDQGFYKQLWHQLETKGQWKGEFINRKKDGSIY 354 Query: 332 GILQIKTSSGAETSA---FIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRN 388 L ++ + + +I DIS ++ + ++++ +DP+T LPNR Sbjct: 355 PQLATISAVMDDKNHLINYICVFEDISV--------RKAHEEKLQRMAFYDPLTNLPNRT 406 Query: 389 NLHNYLDDLVDKA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPD 444 +L + L+ ++ + + +DH + + DS+G+ DQ L ++ R ++ L + Sbjct: 407 HLLSLLEQHIETGHKNQQTFATLFLDIDHFKHINDSMGHFCGDQLLSKLAIRLQDILHLN 466 Query: 445 QYLCRIEGTQFVLVSLENDVSNIT-QIADELRNVVSKPIMIDDKP-FPLTLSIGISYD-- 500 ++ RI G +FV++ + + ++ +V +P + + ++ SIGI+ Sbjct: 467 AHVARIGGDEFVIILPDVHSDVALLETVGDILSVFQQPFDLANHDSLRVSTSIGIALYPR 526 Query: 501 LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLV 560 G++ + LL A AM +KNG NG+ F+SP + + + + +AL +AI QL+L Sbjct: 527 DGQDSETLLKNADTAMYLAKKNGRNGYAFYSPDLTDKSVSHVRIQSALHQAIEKQQLRLE 586 Query: 561 YQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLA 620 +QPQ E + G+E L RW P G VPP+ FIP+AE+ G I++IG WV+ AC+Q Sbjct: 587 FQPQYNLEQHAIVGVETLLRWQHPEFGLVPPADFIPIAEKTGLIQSIGEWVLLHACQQGN 646 Query: 621 EWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEI 680 W Q + ++VN+SAL + + ++SD ++ G +L +EITES ++ + Sbjct: 647 AWLEQGVEFGRIAVNVSALQLQQSNFIQRLSDILNQTGFPAQRLDLEITESFLLIDPQQA 706 Query: 681 FKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAI 740 + LR++G+ +S+DDFGTG+S LS L LP+ ++KID+SFV + A++ AI Sbjct: 707 IASLNQLRELGIEISLDDFGTGYSSLSYLKGLPINKLKIDRSFVSDVPSNSDSNAIVNAI 766 Query: 741 TSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 ++G++L+L VVAEG+ET+EQ + L + C QGY FSRP+ AE++ Sbjct: 767 IAMGKTLSLKVVAEGIETQEQADYLFEKGCVYGQGYLFSRPVSAEKL 813 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 86/250 (34%), Gaps = 9/250 (3%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 F LE + + + N + E W E+IG + L + E Sbjct: 151 FIDCLEDH---IWIKGMDGLYSMTNRSVENAWQKTNSEIIGKDDFALFSHERAEKFIEAD 207 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRDASVEMAQ 131 G + R++ ++ + W S V + L + R+ + Sbjct: 208 NLVVATGTLNIVEECRQID---ENNNPTWLETIKSPVRDNDGNLIGILGMTRNITRRKMV 264 Query: 132 KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFP 191 + Q ++ +++ D +I+ N AFT++ GY E G P +L Sbjct: 265 ETQLSLASKIFNNSQEGMVITDRNANIIDVNTAFTQITGYRSEEVIGKNP-RILRSGHHD 323 Query: 192 ADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEE 251 +L L + + EF+ + G A+IS V D HL N + F DI+ Sbjct: 324 QGFYKQLWHQLETKGQWKGEFINRKKDGSIYPQLATISAVMDDKNHLINYICVFEDISVR 383 Query: 252 RQIRQLEGNI 261 + + + Sbjct: 384 KAHEEKLQRM 393 Score = 72.8 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 8/127 (6%) Query: 18 LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNR 77 + G V+ + N ++ N A ++ GY+ EEVIG N PR LR H + + + Sbjct: 275 FNNSQEGMVITDRNANIIDVNTAFTQITGYRSEEVIGKN-----PRILRSGHHDQGFYKQ 329 Query: 78 EGGKARVEG-MSRELQLEKKDGSKIWTRFALSKV--SAEGKVYYLALVRDASVEMAQKEQ 134 + +G E KKDGS +S V + Y+ + D SV A +E+ Sbjct: 330 LWHQLETKGQWKGEFINRKKDGSIYPQLATISAVMDDKNHLINYICVFEDISVRKAHEEK 389 Query: 135 TRQLIIA 141 +++ Sbjct: 390 LQRMAFY 396 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 739 bits (1909), Expect = 0.0, Method: Composition-based stats. Identities = 162/565 (28%), Positives = 267/565 (47%), Gaps = 31/565 (5%) Query: 251 ERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHG 310 ++ + E + + + + +I R I N + L Sbjct: 303 RKERKDTEKRYRSVISQASDIILLVDIDSRRILE-ANLAFQRLLNYAPDKATQLTLYDIM 361 Query: 311 AEIQNAQSW--------------SATIRQRDGAPAGI-LQIKTSSGAETSAFIERVADIS 355 + ++ W T+R DG+ + L S E + DIS Sbjct: 362 EDDRSGVDWRINRILSEKVCFLGEHTVRAEDGSMVEVDLNANLVSYGEQQVICMVLRDIS 421 Query: 356 QHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV----DKAVSPVVYLIGV 411 E+++ + + D +TGLPNR + L + V + + Sbjct: 422 --------ERKRFEGELMHMAHHDALTGLPNRTLFFDRLRQGLYKKERSGKMLAVIYLDL 473 Query: 412 DHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQI 470 D + + D+LG+ D L EV +R R ++ + R+ G +F ++ E ++ + Sbjct: 474 DRFKIINDTLGHHTGDMLLKEVADRLRGVVRKADTISRLGGDEFTIIIDEIATPADSLLV 533 Query: 471 ADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQ 528 A+++ +V S P ++ +T S+G++ + G + LL A AM + ++ G N +Q Sbjct: 534 AEKILHVFSAPFRLEKHEMFITASMGVTLYPNDGDTAEKLLKNADTAMYHAKEEGRNTYQ 593 Query: 529 FFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGH 588 FFS MN V ERL + L+ A++ N+ L YQP++ TG + G+EAL RW P G Sbjct: 594 FFSEEMNSRVSERLSMETGLRHALARNEFLLHYQPRVNTTTGRIVGVEALIRWQQPQKGL 653 Query: 589 VPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPN 648 + P FIPLAEE G I IG WV+ C Q W+ +SVN+S F + LP+ Sbjct: 654 ILPDAFIPLAEETGLIIPIGEWVLRNTCTQARAWQEAGFAQMRISVNISCRQFTHDNLPD 713 Query: 649 QVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSR 708 + + G+ L +EITES++M + + L++MG+ +++DDFGTG+S LS Sbjct: 714 TIRGILRETGLQPSCLELEITESVIMLNPERAISLLNELKEMGISIAIDDFGTGYSSLSL 773 Query: 709 LVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKI 768 L LP +KIDKSFV K L+ I ++G ++ L +VAEGVE +EQ L + Sbjct: 774 LKRLPADILKIDKSFVSGIPGNKSDETLVATIINLGHNMGLGLVAEGVERQEQLHFLEER 833 Query: 769 HCRVIQGYFFSRPLPAEEIPGWMSS 793 +C+ +QGY+FS+PLPAE + + + Sbjct: 834 NCQEVQGYYFSKPLPAETLQPLLKN 858 Score = 63.5 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 75/220 (34%), Gaps = 13/220 (5%) Query: 117 YYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPE-RHIVQCNRAFTEMFGYCISE 175 Y+ + + +K+ ++ + ++++D + R I++ N AF + Y + Sbjct: 292 GYILYAKLLASRKERKDTEKRYRSVISQASDIILLVDIDSRRILEANLAFQRLLNYAPDK 351 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL 235 A+ + ++ D R + ++L + E + G + + + + V Sbjct: 352 ATQLTLYDIMEDDRSGVDWR--INRILSEKVCFLGEHTVRAEDGSMVEVDLNANLV--SY 407 Query: 236 AHLQNLVMTFSDITEERQIRQL-----EGNILAAMCSSPPFHEMGEIICRNIESVLNESH 290 Q + M DI+E ++ + L + + F + E Sbjct: 408 GEQQVICMVLRDISERKRFEGELMHMAHHDALTGLPNRTLFFDRLRQGLYKKERSGKMLA 467 Query: 291 VSLFALRNGMPIHWASSSHGAEI---QNAQSWSATIRQRD 327 V L I+ H ++ + A +R+ D Sbjct: 468 VIYLDLDRFKIINDTLGHHTGDMLLKEVADRLRGVVRKAD 507 Score = 52.0 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 50/147 (34%), Gaps = 8/147 (5%) Query: 11 DGIFFPALEQNMMGAVLIN-ENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAH 69 + + + Q +L++ ++ ++ N A ++L Y ++ + ++ D Sbjct: 310 EKRYRSVISQASDIILLVDIDSRRILEANLAFQRLLNYAPDKATQLTLYDIMEDDRSGVD 369 Query: 70 PEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEM 129 R E E + +DGS + + VS + ++RD S Sbjct: 370 WRINRILSEKVC-----FLGEHTVRAEDGSMVEVDLNANLVSYGEQQVICMVLRDISERK 424 Query: 130 AQKEQTRQL--IIAVDHLDRPVIVLDP 154 + + + A+ L + D Sbjct: 425 RFEGELMHMAHHDALTGLPNRTLFFDR 451 >UniRef50_Q3A017 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A017_PELCD Length = 847 Score = 739 bits (1909), Expect = 0.0, Method: Composition-based stats. Identities = 200/812 (24%), Positives = 363/812 (44%), Gaps = 53/812 (6%) Query: 15 FPALEQNMMGAVLIN-ENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 +E ++ G V+++ + V+ N A ++ GY EE+ L D + Sbjct: 54 LAFMESSIDGIVIMDGASGGVVEANAAFAEMLGYSMEEL-----RRLHVWDWDAQWSKDE 108 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKE 133 E + +KDG + + +K+ K++ +V+D S + Q++ Sbjct: 109 LRLIIANTG-FSNQRFETRHRRKDGQILDVEISATKIQWLDKLFVFCVVKDISQQKLQQQ 167 Query: 134 QTRQ----LIIAVDHLDRPVIVLDPER-HIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 + +Q + ++ + V+D E ++ N AF EM GY E GM P Sbjct: 168 RLQQELTLWQLLMERSKGGIAVIDGETLKVLDVNPAFAEMLGYEPGEMLGMHPWEWDACR 227 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 + E ++ + G ++ + P+ + +++ DI Sbjct: 228 SRAQIESRAFSSQVSYEEYF-FETIMKRKDGTLRNVEVNSLPMM--VGDRKHVFCLCRDI 284 Query: 249 TEE----RQIRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNESHVSLFA--L 296 TE + + E + + ++P + I +E +L + +L Sbjct: 285 TERCEANKALLAREQDFRSLAENAPDAIVRYDRQLRRLYINPVLERLLGQDKATLLGKPF 344 Query: 297 RNGMPIHWASSSHGAE------IQNAQSWSATIRQRDGAPAGI---LQIKTSSGAETSAF 347 N P+ + E +Q + DG + + + A + Sbjct: 345 ENHAPVDMTAYQDALEKTFQTGLQQVTEVQYPL--PDGTLGWFHARFEPEFAEDATVKSV 402 Query: 348 IERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS---- 403 + V DI+ E + R+ + L D +TGLPNR + +A S Sbjct: 403 MGIVRDIT--------ELVEQRELAQHLAFTDMLTGLPNRALFEKRFKEAAAEAKSTDCP 454 Query: 404 PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN- 462 + ++ +DH +DV DSLG+ D+ L +V R + + R+ G +F ++ E+ Sbjct: 455 FALLMLDLDHFKDVNDSLGHNCGDELLRQVTARLSHCVNECDTIARMGGDEFAILLAESR 514 Query: 463 DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIR 520 Q+AD + + +++P I+ + ++ SIGI++ N D L + A AM + Sbjct: 515 GSDEAGQVADLILSTLAQPFFIESQELFISGSIGIAFFPHDSANLDELFTYADTAMYSAK 574 Query: 521 KNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALAR 580 G N +Q + + V +L LGA+L+ A N++L+L YQP++ + G + G+EAL R Sbjct: 575 HKGRNNFQCYDQELTRHVSAKLSLGASLRYACVNHELQLYYQPKVQLKDGRVVGVEALLR 634 Query: 581 WHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALH 640 W P+ G + P RFI +AEE G I IG WV+ AC+ ++ ++VNLS Sbjct: 635 WWHPVLGMLTPDRFISIAEETGLIVEIGEWVLKTACQAAVDFNRNATAPFKVAVNLSCRQ 694 Query: 641 FRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFG 700 F N L + + G G L EITES+M+E + ++ K ++ LR +G+ +++DDFG Sbjct: 695 FLQNDLAATIEAILKTTGCRGEWLECEITESLMIEDNPQVAKTLEALRSLGITIAIDDFG 754 Query: 701 TGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKE 760 TG+S L+ L P+ +KID+SF++ T+ + L++ ++G +L + +VAEGVET Sbjct: 755 TGYSALNYLSRFPIDVLKIDRSFINHIDTDPCKVGLVKVFIALGTNLEMQIVAEGVETVS 814 Query: 761 QFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 + L+K+ C + QGY F +P P + + +S Sbjct: 815 ESASLQKLGCGLAQGYLFGKPQPFKALMATLS 846 Score = 59.3 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 52/137 (37%), Gaps = 7/137 (5%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A A + F E V + ++ NP E+L G + ++G + P D+ Sbjct: 293 ALLAREQDFRSLAENAPDAIVRYDRQLRRLYINPVLERLLGQDKATLLGKPFENHAPVDM 352 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIW--TRFALSKVSAEGKVYYLALVR 123 A+ + + + G +V E+Q DG+ W RF + +VR Sbjct: 353 -TAYQDALEKTFQTGLQQVT----EVQYPLPDGTLGWFHARFEPEFAEDATVKSVMGIVR 407 Query: 124 DASVEMAQKEQTRQLII 140 D + + Q+E + L Sbjct: 408 DITELVEQRELAQHLAF 424 Score = 55.4 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 86/269 (31%), Gaps = 34/269 (12%) Query: 132 KEQTRQLIIAVDHLDRPVIVLD-PERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEF 190 +E + ++ ++++D +V+ N AF EM GY + E + + + Sbjct: 47 QETGALHLAFMESSIDGIVIMDGASGGVVEANAAFAEMLGYSMEELRRLH---VWDWDAQ 103 Query: 191 PADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT- 249 + + +RL + + E + G+ + ++ S + + + DI+ Sbjct: 104 WSKDELRLIIANTGFSNQRFETRHRRKDGQILDVEISATKIQ--WLDKLFVFCVVKDISQ 161 Query: 250 -------------------EERQ--IRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNE 288 E + I ++G L + +P F E++ +L Sbjct: 162 QKLQQQRLQQELTLWQLLMERSKGGIAVIDGETLKVLDVNPAF---AEMLGYEPGEMLGM 218 Query: 289 SHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTS-SGAETSAF 347 A R+ I + S + + ++++DG + + Sbjct: 219 HPWEWDACRSRAQIESRAFSSQVSYEEY-FFETIMKRKDGTLRNVEVNSLPMMVGDRKHV 277 Query: 348 IERVADISQHMAALALEQEKSRQHIEQLI 376 DI++ A + Q L Sbjct: 278 FCLCRDITERCEANKALLAR-EQDFRSLA 305 >UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTL1_METML Length = 976 Score = 739 bits (1908), Expect = 0.0, Method: Composition-based stats. Identities = 196/703 (27%), Positives = 321/703 (45%), Gaps = 46/703 (6%) Query: 121 LVRDASVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 + R E+ + + A++ V + Q ++ + EM GY +E Sbjct: 267 VARRTQALKENIEELKNSEFRWKFAIEGAGDGVWDWNIATDEAQYSKRWKEMLGYDENEL 326 Query: 177 S--GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV-YD 233 + ++ + + L KTA E+ L + WI V D Sbjct: 327 LPTNQEWADRVHHDDVAYVKQTMQDYLEGKTALYVVEYRLKCKDNRYKWILGRGMIVSRD 386 Query: 234 VLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI--ICRNIESVLNESHV 291 + ++ T +DITE ++I Q A S E I R ++ ++ + Sbjct: 387 DQGNPLRMIGTHTDITERKKIEQQLRIAATAFESQEGIVVTNENFNILRVNQAFIDITGY 446 Query: 292 SLFALRNGMPIHWASSSHGAEIQN--------AQSWSATI--RQRDGAPAG----ILQIK 337 P S E SWS I R+++G I +K Sbjct: 447 EAEEATGKKPNILKSGRQSGEFYRNIYTSLRETGSWSGEIINRRKNGEIYPEHLTITAVK 506 Query: 338 TSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDL 397 + G +T+ ++ DIS + + + IE L FDP+T LPNR + L Sbjct: 507 DADG-QTTNYVGMFTDISVA--------KAASERIENLAFFDPLTNLPNRRLFSDRLTQA 557 Query: 398 VDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGT 453 + + + + +DH + + D+LG+ + D L +V R ++ + R+ G Sbjct: 558 LVNSTRSGNYGALVFLDLDHFKSLNDTLGHDYGDMLLKQVALRLSNCVREGDSVARLGGD 617 Query: 454 QFVLVSLENDVSNITQ------IADELRNVVSKPIMIDDKPFPLTLSIGISYDLG--KNR 505 +FVL+ +++ I D++ +++P + + T SIGIS G ++ Sbjct: 618 EFVLLVENLSANDVEAAHQIEAIGDKILMSLNQPYQLQSHEYLSTPSIGISLFNGHQESS 677 Query: 506 DYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQI 565 + LL A AM +K G N +FF P M E + R+ L LK+AI Q +L YQ Q+ Sbjct: 678 EDLLKHADIAMYQAKKAGRNTLRFFDPLMQETINMRVDLERELKKAIEQKQFELYYQVQM 737 Query: 566 FAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWR-S 624 + G+ G EAL RW P G + P +FIP+AEE G I IG WV+ +AC QL W+ Sbjct: 738 NSA-GQPSGAEALIRWRHPERGIISPIQFIPVAEETGLITQIGEWVLNQACLQLQAWQLD 796 Query: 625 QNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRI 684 Q +L++N+SA F NQV +++ ++ ID +L +E+TESM++++ + + Sbjct: 797 QASKDFSLAINVSAKQFLQPDFANQVKNSIRSFHIDNTKLKLELTESMLIDNIEYVIHTM 856 Query: 685 QILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIG 744 L ++G+ S+DDFGTG+S L L LP++++KID+SFV T+ ++ I ++ Sbjct: 857 NTLGEIGIQFSLDDFGTGYSSLQYLKMLPLSQLKIDQSFVRDLATDNSNKTIVLTIITMA 916 Query: 745 QSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 SL L V+AEGVET EQ ++L C QGY+FS PL E Sbjct: 917 HSLGLNVIAEGVETDEQLQLLNAHGCGNYQGYYFSEPLSINEF 959 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 103/259 (39%), Gaps = 14/259 (5%) Query: 10 ADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAH 69 ++ + A+E G N + ++ +++ GY E++ N H Sbjct: 284 SEFRWKFAIEGAGDGVWDWNIATDEAQYSKRWKEMLGYDENELLPTN-----QEWADRVH 338 Query: 70 PEYIRHNREGGKARVEGMS----RELQLEKKDGSKIWTR---FALSKVSAEGKVYYLALV 122 + + + ++ + +EG + E +L+ KD W +S+ + + Sbjct: 339 HDDVAYVKQTMQDYLEGKTALYVVEYRLKCKDNRYKWILGRGMIVSRDDQGNPLRMIGTH 398 Query: 123 RDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPD 182 D + ++Q R A + ++V + +I++ N+AF ++ GY EA+G +P+ Sbjct: 399 TDITERKKIEQQLRIAATAFE-SQEGIVVTNENFNILRVNQAFIDITGYEAEEATGKKPN 457 Query: 183 TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 L + + R + L +T E + + GE +I+ V D N V Sbjct: 458 ILKSGRQSGEFYRN-IYTSLRETGSWSGEIINRRKNGEIYPEHLTITAVKDADGQTTNYV 516 Query: 243 MTFSDITEERQIRQLEGNI 261 F+DI+ + + N+ Sbjct: 517 GMFTDISVAKAASERIENL 535 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 738 bits (1907), Expect = 0.0, Method: Composition-based stats. Identities = 165/561 (29%), Positives = 268/561 (47%), Gaps = 30/561 (5%) Query: 252 RQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGA 311 +Q +L + A + II + + + P +SS Sbjct: 278 QQNLRLADKVFEATLEGIIITDAEGIIETVNPAFTRITGWRREEVVGKNPRILSSSQQPP 337 Query: 312 EIQNA--------QSWSATI--RQRDG----APAGILQIKTSSGAETSAFIERVADISQH 357 E W + R++DG I I+ G + + +DI+Q Sbjct: 338 EFYRHLWQSLREHGFWQGEVINRRKDGKFYTEHLTITGIRGPDGT-FTHYAGIFSDITQ- 395 Query: 358 MAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA----VSPVVYLIGVDH 413 ++ + + + L DP+T LPNR L L + +A + + +D Sbjct: 396 -------RKLNEERLHYLANHDPLTDLPNRTLLMERLGAALTRAHRQGKRVALMFLDLDR 448 Query: 414 IQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLENDVSNITQIAD 472 + + D+LG+A D+ L V +R L+ + R+ G +F +++ D+ + Q A Sbjct: 449 FKFINDTLGHAVGDKLLQTVASRLTGSLRASDTVARLGGDEFNIVLEDIRDLRGVAQTAQ 508 Query: 473 ELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFF 530 +L + V + +D +T S+GI+ D G + L A AM ++ G N +QFF Sbjct: 509 KLIDRVQGMVTLDGHDVYVTASVGIAIYPDDGSTPEVLRMNADTAMYRAKERGKNNFQFF 568 Query: 531 SPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVP 590 + MN RL L + L A++ + +L +QP++ G +YG+EAL RW G V Sbjct: 569 TADMNASTLARLRLESNLHRALARQEFQLHFQPKVDLAHGHIYGMEALLRWRSHELGPVS 628 Query: 591 PSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQV 650 P+ FIP+AEE I IG WV+ +ACRQ W + + ++VNLS+ + V Sbjct: 629 PADFIPIAEESNLISTIGEWVLEQACRQARHWLNLGLLPGTVAVNLSSKQMTQGDIVATV 688 Query: 651 SDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLV 710 + + GH L +EITES+ M++ E+ + ++ L+ +GV +++DDFGTG+S LS L Sbjct: 689 RRILEHSNLPGHYLELEITESVAMDNTGEMIRTLKNLKALGVRIAIDDFGTGYSSLSYLK 748 Query: 711 SLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHC 770 LP+ +KID+SFV ++ A+ AI S+GQSLNL VAEGVE +E + L C Sbjct: 749 QLPIDVLKIDRSFVTDLHEDRDDAAIASAIISMGQSLNLQPVAEGVEREEHRQFLLDHGC 808 Query: 771 RVIQGYFFSRPLPAEEIPGWM 791 + QGY FSRP+PA + + Sbjct: 809 QYGQGYLFSRPVPAATMEQLL 829 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 37/237 (15%), Positives = 79/237 (33%), Gaps = 4/237 (1%) Query: 120 ALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 AL ++ R + +I+ D E I N AFT + G+ E G Sbjct: 266 ALKERDEALNLSQQNLRLADKVFEATLEGIIITDAEGIIETVNPAFTRITGWRREEVVGK 325 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 P +L+ + P + L Q L + Q E + + G+ +I+ + Sbjct: 326 NP-RILSSSQQPPEFYRHLWQSLREHGFWQGEVINRRKDGKFYTEHLTITGIRGPDGTFT 384 Query: 240 NLVMTFSDITEERQIRQLEGNILAA--MCSSPPFHEMGEIICRNIESVLNESHVSLFALR 297 + FSDIT+ + + + + P + E + + + Sbjct: 385 HYAGIFSDITQRKLNEERLHYLANHDPLTDLPNRTLLMERLGAALTRAHRQGKRVALMFL 444 Query: 298 NGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADI 354 + + + + G + + + + G+ + G E + +E + D+ Sbjct: 445 DLDRFKFINDTLGHAVGD-KLLQTVASRLTGSLRASDTVARLGGDEFNIVLEDIRDL 500 Score = 72.8 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 53/134 (39%), Gaps = 10/134 (7%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP 67 AD +F LE G ++ + + NPA ++ G++REEV+G N +L Sbjct: 282 RLADKVFEATLE----GIIITDAEGIIETVNPAFTRITGWRREEVVGKNPRIL---SSSQ 334 Query: 68 AHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVY--YLALVRDA 125 PE+ RH + + E+ +KDG ++ + + Y + D Sbjct: 335 QPPEFYRHLWQSLREHG-FWQGEVINRRKDGKFYTEHLTITGIRGPDGTFTHYAGIFSDI 393 Query: 126 SVEMAQKEQTRQLI 139 + +E+ L Sbjct: 394 TQRKLNEERLHYLA 407 >UniRef50_Q31NI4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31NI4_SYNE7 Length = 929 Score = 738 bits (1907), Expect = 0.0, Method: Composition-based stats. Identities = 198/820 (24%), Positives = 368/820 (44%), Gaps = 64/820 (7%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINEND-EVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 T ++ + E N + + + + N AA + +GY ++E + + + Sbjct: 133 TTRLAESESRYRLLFEANPEPMWVFAKQGLQFLAVNQAASQFFGYSQQEFLAMTVLDIQS 192 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALV 122 + + ++ V+ K G ++ + + + L L Sbjct: 193 EEEKTRFLQFFESLI--CNQIVDPAVGVWAYRHKQGHLVFADVLIHDFEFDNQPCCLILA 250 Query: 123 RDASVEMAQKE----QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 D + + A +E + + ++ P++V+ +R I N A ++ + + Sbjct: 251 IDITEKQAARELAHQREQAFRKLLNDNRDPLLVISGDRRICYANPAAQKLLKLNLEQLES 310 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 D L + E+ L G ++ S D Sbjct: 311 QSLDLPLLSDKL-------------------TEWALTLPDGSVAEVEIHRSE-TDWEGQP 350 Query: 239 QNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEII---------CRNIESVLNES 289 +L+ + DI E + Q + ++ +S + + I E + S Sbjct: 351 ADLL-SLRDIAERKASEQQLRLLKESLEASFNGVVIVDAIEPDMPVIYVNPAFERITGYS 409 Query: 290 HVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATIR--QRDGAPAG----ILQIKT 338 + L+ + A++ IR ++DG P I I Sbjct: 410 EAEMLGRNCRILQGNERDSLQIEEIHRGLSQAENVHVVIRNFRKDGQPFWNDLYISPIFN 469 Query: 339 SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDD-- 396 + G + FI DI+ EQ++ + + D +TGLPNR L + L Sbjct: 470 AQGN-VTHFIGVQNDIT--------EQKRYEEELSFSASHDVLTGLPNRAVLEDRLRQGC 520 Query: 397 --LVDKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQ 454 + + S + I +D + + DS+G+ D L+EV R E+++ + RI G + Sbjct: 521 KMALRQKHSLAILFIDLDGFKLINDSIGHRSGDLLLVEVAQRMCEQVRAGDTVARIGGDE 580 Query: 455 FVLVSLENDVS-NITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGK--NRDYLLST 511 F+++ ++ + ++ IAD L V++P I +T S+GI+ G L+ Sbjct: 581 FIILLVDLKLENDVISIADRLLASVARPYHIQGIYLHVTASMGITLSDGDIEQPTQLIQQ 640 Query: 512 AHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGE 571 A AM ++ G N +Q+++ +N ++ER+ L L++AI +L +QP+I +G+ Sbjct: 641 ADLAMYKAKQEGRNNYQWYTNDLNLRLRERVHLRNELQKAIETEAFELYFQPKIEGCSGQ 700 Query: 572 LYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPA 631 + G+EAL RW P G + P+ F+P+AE+ G+I + +WV+ ACRQL + Q I P+ Sbjct: 701 VIGLEALLRWQHPQMGFISPATFVPIAEDTGQIIPLSQWVLETACRQLRDLLQQGIAAPS 760 Query: 632 LSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMG 691 ++VN+S + FR V A+ + + L +EITE+++ ++ + +++Q L+++G Sbjct: 761 VAVNISTVQFRRINFVKSVQSALQKYQLKSEHLEIEITENVLFDNTEKAIEKLQRLKELG 820 Query: 692 VGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTV 751 V +S+DDFGTGFS LS L LP+ +KID+SFV T+ R A+ + I S+ L L V Sbjct: 821 VNISIDDFGTGFSSLSYLKELPIDTVKIDRSFVQEINTDSRDAAITQGIISMAHHLRLNV 880 Query: 752 VAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 VAEGVET++QF+ L++ +C QGY+F++P+P E + ++ Sbjct: 881 VAEGVETEQQFKFLQQSNCDQYQGYYFAKPMPFEALKQYL 920 >UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Shewanella RepID=A6WKV6_SHEB8 Length = 921 Score = 738 bits (1906), Expect = 0.0, Method: Composition-based stats. Identities = 182/679 (26%), Positives = 309/679 (45%), Gaps = 32/679 (4%) Query: 138 LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIR 197 L +D + + + + CNR+ + + SE G L Sbjct: 251 LQTFIDSFEEHIWMKNVAGIYTLCNRSVEKAWEMPRSEIVGKSDVELFGAEIANIFLEGD 310 Query: 198 LQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQL 257 + E L +W++ P + ++ +I++ +++ + Sbjct: 311 RLAIESGMPIIVAECLDGNEAKNHLWLETLKLPTLNPQGEFVGVIGMTRNISKHKEVEEQ 370 Query: 258 EG---NILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQ 314 N+ + I + + L P ++S H Sbjct: 371 LTLATNVFKNSVEGVVVTDRHGNITDVNGAFFEITGYVREELLGQNPRIFSSGRHDKAFF 430 Query: 315 NA--------QSWSATI--RQRDGAPAG---ILQIKTSSGAETSAFIERVADISQHMAAL 361 + W+ I R+++G + + F+ ADIS Sbjct: 431 DKLWNALLANGKWNGEIWNRRKNGTIFPQNITISTIYDEVGDVRYFVAVFADISA----- 485 Query: 362 ALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDV 417 Q+++ + L FDP+T LPNR L V +A +I VD + + Sbjct: 486 ---QKENEAQLTHLAYFDPLTHLPNRMKFMMQLKQEVRQAKRLNLQLATVMIDVDLFKHI 542 Query: 418 IDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFV-LVSLENDVSNITQIADELRN 476 DS G++ D+ L+E+ R R ++ L RI G +FV L+S ++ + T ++LR Sbjct: 543 NDSFGHSIGDEMLVELAKRLRSQVGDQDVLSRIGGDEFVALISGIDNNEDATVAINQLRQ 602 Query: 477 VVSKPIMID-DKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPA 533 V +P ++ LT S+G+S + G + D LL A AM + +G N + F++ + Sbjct: 603 VFEQPFIVSTGDHLRLTASMGVSLYPNDGTDADTLLRNADAAMYRAKNDGRNNYAFYTES 662 Query: 534 MNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSR 593 + + E L L +AL AI N L L+YQP++ + + G EAL RWHDP G + P+ Sbjct: 663 LTQQSFEHLKLQSALYGAIEQNALYLMYQPKLDLVSRKTVGFEALLRWHDPQLGLISPAV 722 Query: 594 FIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDA 653 FIP+AE+IG I IG WV+ ACRQ W + H ++VN++ + + + V Sbjct: 723 FIPVAEKIGLIHEIGLWVLETACRQGMRWLREGKHFGRIAVNVAGQQLQRSSFVDDVKRV 782 Query: 654 MHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLP 713 + G+ L +E+TES+MM++ + ++ L D+G+ LSVDDFGTG+S L+ L LP Sbjct: 783 LAETGLPAKHLELEVTESVMMQNPDLAIRDLKRLGDLGIELSVDDFGTGYSSLNYLKKLP 842 Query: 714 VTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVI 773 + ++KID+SFV + A+ +A+ ++G +L L ++AEGVETKEQ + L++ C Sbjct: 843 IHKLKIDQSFVRDIPFDTNNTAIAKAVIALGHALKLDIIAEGVETKEQADFLQQNQCDQA 902 Query: 774 QGYFFSRPLPAEEIPGWMS 792 QGY FSRP E++ ++S Sbjct: 903 QGYLFSRPQLPEDLDAFLS 921 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 97/264 (36%), Gaps = 17/264 (6%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 T D F + E++ + N N + EK W R E++G + Sbjct: 244 TCVDTVDLQTFIDSFEEH---IWMKNVAGIYTLCNRSVEKAWEMPRSEIVGKS------- 293 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSK----IWTR-FALSKVSAEGK-VY 117 D+ E EG + +E + E DG++ +W L ++ +G+ V Sbjct: 294 DVELFGAEIANIFLEGDRLAIESGMPIIVAECLDGNEAKNHLWLETLKLPTLNPQGEFVG 353 Query: 118 YLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 + + R+ S +EQ + V+V D +I N AF E+ GY E Sbjct: 354 VIGMTRNISKHKEVEEQLTLATNVFKNSVEGVVVTDRHGNITDVNGAFFEITGYVREELL 413 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 G P + + +L L + E + G +IS +YD + Sbjct: 414 GQNP-RIFSSGRHDKAFFDKLWNALLANGKWNGEIWNRRKNGTIFPQNITISTIYDEVGD 472 Query: 238 LQNLVMTFSDITEERQIRQLEGNI 261 ++ V F+DI+ +++ ++ Sbjct: 473 VRYFVAVFADISAQKENEAQLTHL 496 >UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAF7_MAGSM Length = 951 Score = 738 bits (1906), Expect = 0.0, Method: Composition-based stats. Identities = 183/693 (26%), Positives = 317/693 (45%), Gaps = 36/693 (5%) Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLD--PERHIVQCNRAFTEMFGYCISE-ASGMQPDTLL 185 +E + V+ + V ER +V + ++ G + + G L Sbjct: 251 RVLRENDARFQALVESIHAGVYRTQVTLERRLVYASAQMHQVAGLSMQQCQEGGVSLKSL 310 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 +PE + L+ + + ++ + ++W+ + D Sbjct: 311 VVPEDWPHVQEALEWSIKTHVPYEMQYRINHPQRGEMWVSDRGRIIKDHQGQPCWFDGAL 370 Query: 246 SDITEERQIRQLEGNILAAMCSSPPFHEM----GEIICRNI--ESVLNESHVSLFA---- 295 +I E R+ Q + ++ + +I+ N E + + Sbjct: 371 LNIHEARETEQQLLLAKQVVQTASEAIVITNHKNQIMDVNPAYERITGFMRHEVLGRNPK 430 Query: 296 -LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGA----PAGILQIKTSSGAETSAFI 348 ++G ++ + WS I R+R+G I I+ G S F+ Sbjct: 431 ITQSGRHDASFYATMWKHLVGEGHWSGEIWDRRRNGEIFPKWLAISAIRNRQGV-ISHFV 489 Query: 349 ERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP---- 404 DIS+ Q+ + Q +E+L+ +DP+T LPNR + L V A Sbjct: 490 GVFNDISR--------QKSTEQQLERLVFYDPLTQLPNRVLFRDRLIHEVGVAERSNKLM 541 Query: 405 VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-ND 463 + L+ +D + + D+LG+ D+ LL+V R ++ + R+ G +F ++ Sbjct: 542 SLLLVDLDRFKIINDTLGHGVGDELLLQVSKRLIASVRKSDTVARLGGDEFAIILPGMER 601 Query: 464 VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRK 521 + +A+ + N + P I++ + SIGI+ G + D L A AM ++ Sbjct: 602 AEDAAHVAETIINQLQVPFSIEENELFVGASIGIAVHGQDGDDYDSLTMNADAAMFKAKE 661 Query: 522 NGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARW 581 +G ++FF+P MN +RLV+ A L+ A+ N +L L YQP++ AE+ ++ G+EAL RW Sbjct: 662 SGKGTYKFFTPDMNIQNAKRLVMEAELRRAVDNQELMLHYQPKVDAESRQIVGMEALVRW 721 Query: 582 HDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHF 641 P G +PP FIPLAEE G I +G V+ AC Q+ +W + ++VNLS F Sbjct: 722 VHPTRGVIPPGEFIPLAEETGLIVPLGELVLTRACAQVKQWWDMGLPQVQVAVNLSPRQF 781 Query: 642 RSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGT 701 + L +VS+ + G L +EITES+ M + ++ L+D+GV +S+DDFGT Sbjct: 782 QEPNLIEKVSEILRKTGFPATGLELEITESIAMHDVDNTIETVKKLKDLGVRISIDDFGT 841 Query: 702 GFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQ 761 G+S LS L P+ +KID+SFV + +++ +I S+ +++ L VVAEGVET +Q Sbjct: 842 GYSSLSYLKKFPLHALKIDQSFVRDLGGDDDGASIISSIISMAKAMALGVVAEGVETAQQ 901 Query: 762 FEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 E LR C+ +QG+F S+PLP + + Sbjct: 902 MEFLRGQECQQVQGFFLSKPLPPSDFLALLERQ 934 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 31/259 (11%), Positives = 83/259 (32%), Gaps = 7/259 (2%) Query: 8 NAADGIFFPALEQNMMGAV--LINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 D F +E G + +++ + ++ G ++ + + + Sbjct: 254 RENDARFQALVESIHAGVYRTQVTLERRLVYASAQMHQVAGLSMQQC--QEGGVSLKSLV 311 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKVYYL-ALVR 123 P +++ E + ++ ++W + +G+ + + Sbjct: 312 VPEDWPHVQEALEWSIKTHVPYEMQYRINHPQRGEMWVSDRGRIIKDHQGQPCWFDGALL 371 Query: 124 DASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDT 183 + ++Q V +++ + + I+ N A+ + G+ E G P Sbjct: 372 NIHEARETEQQLLLAKQVVQTASEAIVITNHKNQIMDVNPAYERITGFMRHEVLGRNPK- 430 Query: 184 LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVM 243 + A + + L E R GE +IS + + + + V Sbjct: 431 ITQSGRHDASFYATMWKHLVGEGHWSGEIWDRRRNGEIFPKWLAISAIRNRQGVISHFVG 490 Query: 244 TFSDITEERQIRQLEGNIL 262 F+DI+ ++ Q ++ Sbjct: 491 VFNDISRQKSTEQQLERLV 509 >UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionella ferruginea ES-2 RepID=C5V4D4_9PROT Length = 925 Score = 738 bits (1905), Expect = 0.0, Method: Composition-based stats. Identities = 191/691 (27%), Positives = 328/691 (47%), Gaps = 48/691 (6%) Query: 137 QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRI 196 ++ + + V+V D + + N + G+ +EA G + + + ++ Sbjct: 246 RIRAIYEAIGDAVLVGDRQGRVESINATAQRLLGWTEAEARGKLISDVFEL--YDVHHQQ 303 Query: 197 RLQQLLWKTARD------QDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITE 250 R++ RD + LL R G ++ ++ S +PV D + +VM F D+++ Sbjct: 304 RVESPAESVLRDGIPIPMSNGMLLRRRDGSQLAVEDSAAPVRDEHGNAVGVVMVFHDVSK 363 Query: 251 ERQIRQLEGNILAAMCS--------SPPFHEMGEIICRNIES----------VLNESHVS 292 + G A + F E +I N E+ +L Sbjct: 364 RYALLDELGAARAQFETLFEQLPEGVLLFDESLAVITHNREAANLLEYASDALLLLQVSD 423 Query: 293 LFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETS--AFIER 350 + A+ + I A+ ++ ++ + R R G + AF Sbjct: 424 IEAMDDQNAI--AARKEKLQLTGIDNFESRYRTRSGRLMDVDVSVQVVQLPNGRIAFQTL 481 Query: 351 VADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV----DKAVSPVV 406 DI+ EQ+++ IE L D +TGLPNR L + L V + + Sbjct: 482 FRDIT--------EQKQTSAQIEHLAYHDQLTGLPNRRLLKDRLSQAVSSVVRRDAKLAL 533 Query: 407 YLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVS 465 + +DH +DV DSLG+ D L V R + ++ D L R+ G +FVL+ N Sbjct: 534 MYLDLDHFKDVNDSLGHGAGDVLLQIVAERLQGCVRADDTLARMGGDEFVLLLNGVNGAD 593 Query: 466 NITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNG 523 ++ IA ++ + +S+P+ I + +T S+GIS G++ D LL A A+ ++ G Sbjct: 594 DVASIAGKIIHELSQPMRIGNDELRITPSLGISMCPQDGRDADDLLKYADVALYQAKQQG 653 Query: 524 GNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHD 583 ++F++ A+++ ER+ L L+ A+ N+ +L YQPQ+ G + G EAL RW+ Sbjct: 654 RATYRFYTQALHDQSVERVQLERLLRHALERNEFELYYQPQVDLCDGRIIGCEALIRWNH 713 Query: 584 PLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHF-R 642 P G V P+RFIP+AE+ G I +IG WV+ +AC Q W Q +S N+SA F R Sbjct: 714 PGMGQVSPARFIPIAEQSGLIIDIGNWVMKQACHQAKRWHDQGWD-IKVSFNVSARQFMR 772 Query: 643 SNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTG 702 S +L + DA+ G+D ++ VE+TES+++ + + + +R +G+ L++DDFGTG Sbjct: 773 SGELMQSLRDALAESGVDPTRMEVELTESLLL-DPQGMGEILHEIRALGIQLALDDFGTG 831 Query: 703 FSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQF 762 +S LS L P++ +KID+SFV +++ I + +L ++++AEG+ET Q Sbjct: 832 YSSLSYLRRFPISILKIDRSFVSAADNNADDAEMVKTIIGMAHNLRMSLIAEGIETNAQR 891 Query: 763 EMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 +ML C V QGY +S P+PA E + Sbjct: 892 DMLETQGCEVGQGYHYSCPVPATEFSLLLQQ 922 Score = 92.4 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 88/259 (33%), Gaps = 10/259 (3%) Query: 10 ADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAH 69 +D E ++ + V N A++L G+ E G I + Sbjct: 243 SDARIRAIYEAIGDAVLVGDRQGRVESINATAQRLLGWTEAEARGKLISDVFELYDVHHQ 302 Query: 70 PEYIRHNREGGKARVEG-MSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRDAS 126 + + MS + L ++DGS++ + + V E V + + D S Sbjct: 303 QRVESPAESVLRDGIPIPMSNGMLLRRRDGSQLAVEDSAAPVRDEHGNAVGVVMVFHDVS 362 Query: 127 VEMAQKEQT----RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPD 182 A ++ Q + L V++ D ++ NR + Y +Q Sbjct: 363 KRYALLDELGAARAQFETLFEQLPEGVLLFDESLAVITHNREAANLLEYASDALLLLQVS 422 Query: 183 TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 + + + A + + L T D E TR+G + + S+ V + Sbjct: 423 DIEAMDDQNAIAARK--EKLQLTGIDNFESRYRTRSGRLMDVDVSVQVVQLPNGRI-AFQ 479 Query: 243 MTFSDITEERQIRQLEGNI 261 F DITE++Q ++ Sbjct: 480 TLFRDITEQKQTSAQIEHL 498 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 48/138 (34%), Gaps = 6/138 (4%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 L D AA F EQ G +L +E+ V+ N A L Y + ++ + + Sbjct: 367 LLDELGAARAQFETLFEQLPEGVLLFDESLAVITHNREAANLLEYASDALLLLQVSDIEA 426 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS-AEGKVYYLAL 121 D + A + G E + + G + ++ V G++ + L Sbjct: 427 MDDQNAIAARKEKLQLTGIDNF-----ESRYRTRSGRLMDVDVSVQVVQLPNGRIAFQTL 481 Query: 122 VRDASVEMAQKEQTRQLI 139 RD + + Q L Sbjct: 482 FRDITEQKQTSAQIEHLA 499 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 737 bits (1904), Expect = 0.0, Method: Composition-based stats. Identities = 189/829 (22%), Positives = 339/829 (40%), Gaps = 65/829 (7%) Query: 10 ADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAH 69 ++ A+ MG +N D+ + + + G + ++ L+ Sbjct: 184 SENRLHIAMRTAQMGNWSLNLADDSLTLSSEFPAILGTSAA--MPQTLEELLLH-YAAES 240 Query: 70 PEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLAL---VRDAS 126 +RH + E Q+ + W R + +V +G+ + ++D + Sbjct: 241 RGRLRHVISECARKGTPFDEEAQMLTAQDGRRWVRI-IGEVVRDGQGAITRIQGALQDIN 299 Query: 127 VEMAQKEQTRQLIIAVDHL----DRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPD 182 +E+T +L + + + LD E N+ + +E G + Sbjct: 300 ARKQAQEETLRLAMRLTTTLASITEAFVTLDREGRFTYLNQESERLLQRSTAELLGQEIW 359 Query: 183 TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 E R +Q+ L + + E+ W++ P + L Sbjct: 360 QDF-GEEVSGRLRQHIQRALATNRQVEFEYFDAPLG---KWLEVRAYPF------AEGLA 409 Query: 243 MTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE------------IICRNIESVLNESH 290 + F D++E R ++ + + + E + E + Sbjct: 410 VYFRDVSERRNSQEQLMLLETGIARLNDIVVIVEASPHHGSGPQIVFVNDAFERHTGYTR 469 Query: 291 VSLFALRNGMPIHWASSSHGAE--IQNAQSW-----SATIRQRDGAPAGI---LQIKTSS 340 + + GM + Q W I ++DG + + + Sbjct: 470 DEVLSRMPGMLQGPGTRQDELARIFSALQQWKQARGELVIYRKDGGSFWVDLEIVSVAAQ 529 Query: 341 GAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDK 400 + + ++ DI+Q ++ + + I L +DP+T LPNR L + L+ + Sbjct: 530 NGDLTHWVAVGRDITQ--------RKAADEKIHHLAFYDPLTELPNRQLLLDRLEQALAD 581 Query: 401 A----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFV 456 V+ I +D+ + + D++G++ D L +V R + ++ + R+ G +FV Sbjct: 582 CTITRQEGVLMFIDLDNFKILNDTVGHSKGDLLLQKVAVRLKGCVRKLDTVARLGGDEFV 641 Query: 457 LVS------LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGK--NRDYL 508 ++ E +A+++ + +P + T SIG++ + + L Sbjct: 642 VMLQDLGTQPEAATRKAQIVAEKVLATLREPYDLAGYQHYSTSSIGVTPFNARQGSVSEL 701 Query: 509 LSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAE 568 L A AM + G N FF P M V L L+ + +Q + YQPQ+ Sbjct: 702 LKQADLAMYQAKTMGRNTVCFFDPDMQASVSANAALSTDLRAGLREHQFLVHYQPQVD-R 760 Query: 569 TGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN-I 627 + G+EAL RW P G V P+ FIP+AEE G I +G+WV+ +AC QLA W+ + Sbjct: 761 EQRITGVEALLRWKHPQRGMVSPAEFIPVAEETGLILPLGQWVLEQACLQLAVWQKRPET 820 Query: 628 HIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQIL 687 +++VN+S FR + V A+ GI H L +E+TES++ + ++ L Sbjct: 821 AGLSIAVNVSVRQFRHPDFVDMVMAAIKHTGIQPHNLKLELTESLLADRMEIAIAKMGTL 880 Query: 688 RDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSL 747 + +GV L++DDFG G+S LS L LP+ ++KIDKSF+ ++ A+ AI S+ QSL Sbjct: 881 KALGVTLALDDFGMGYSSLSYLKRLPLDQLKIDKSFIADVFSDPNDAAICSAIISLAQSL 940 Query: 748 NLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLP 796 L V+AEGVET+ Q L + C QG+ F PLP E +M P Sbjct: 941 GLDVIAEGVETEAQRSFLAGLGCGYYQGFLFCPPLPIAEFEAFMQGAAP 989 >UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q21SZ9_RHOFD Length = 1169 Score = 736 bits (1902), Expect = 0.0, Method: Composition-based stats. Identities = 200/765 (26%), Positives = 336/765 (43%), Gaps = 50/765 (6%) Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDA 125 E + R E S EL+ +WT S + G Y+L +R + Sbjct: 419 ERYATENKQREINELTRRNEQQSAELRQRALQERWLWTVLGGSALVFAGSAYFLLRLRRS 478 Query: 126 SVEMAQ-----KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 + + + QL D + P+ VL + C + ++ + G Sbjct: 479 NRMLEALNTQVQRSQNQLQATFDAIPDPLFVLGLDGRYYDCRSSRADLLAAPAEDLIGKT 538 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ- 239 +L PE + L++ K +F L G + W + S++ + Q Sbjct: 539 VSDVLP-PEAASICLSALREANEKGTSTGKQFELQLAHG-RAWFELSVA--RKSVGQRQE 594 Query: 240 -NLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESHVS 292 ++ DITE +Q + I A S + + I R + S Sbjct: 595 PRFIVLSRDITERKQAEEAL-RIAATAFESQEGMTVTDAQGAVLRINRAFTEITGYSADE 653 Query: 293 LFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGIL---QIKTSSGA 342 + L++G ++ I+ SW I R+++G L +G Sbjct: 654 VVGHNPRLLQSGRHDKAFYAAMWESIRRTGSWQGEIWNRRKNGEAYPELLSITAVKENGG 713 Query: 343 ETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV 402 + ++ DI++ ++ + I L FD TGLPNR L + L + + Sbjct: 714 IVTHYVGTFMDITR--------RKAAEDEIRNLAFFDLQTGLPNRRLLLDRLQQALAASA 765 Query: 403 SP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV 458 + LI +D+ + + D+LG+ D L +V R + + R+ G +FV++ Sbjct: 766 RHRRQGALLLIDLDNFKTLNDTLGHDKGDLLLQQVAQRLASCVHEGGTVARLGGDEFVVM 825 Query: 459 S------LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLS 510 LE + +A + + + +D + T SIGI+ + + + LL Sbjct: 826 LENLSEHLEAAATQAETLAKRILASLKQTYSLDGYEYQSTASIGITLFSEQQETTEDLLK 885 Query: 511 TAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETG 570 A AM + G N +FF P M +V R L A L+ A+++++ L YQ Q+ + G Sbjct: 886 RADLAMYQAKAVGRNTLRFFDPEMQAVVTSRAALEAGLRRAVTSDEFLLYYQAQVDGQ-G 944 Query: 571 ELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN-IHI 629 L G EAL RW P G V P FI LAE+ G I +GRWV+ AC QLA+W ++ + Sbjct: 945 HLTGCEALLRWQHPERGLVAPGEFIALAEDTGLILPLGRWVLDAACTQLAQWATRPEMAH 1004 Query: 630 PALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRD 689 ++VN+S F NQV + + G + +L +E+TES+++ ++ ++ IL++ Sbjct: 1005 LTVAVNVSVRQFHQADFVNQVLTVLDSTGTNPQRLKLELTESLLIGDVEDVIAKMSILKE 1064 Query: 690 MGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNL 749 GVG S+DDFGTG+S LS L LP+ ++KID+ FV L + A+ + ++G SL L Sbjct: 1065 KGVGFSLDDFGTGYSSLSYLKRLPLDQLKIDQGFVRNILIDPNDAAIARMVIALGDSLGL 1124 Query: 750 TVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 V+AEGVE + Q + L ++ C QGY F RPLP ++ ++ V Sbjct: 1125 AVIAEGVEIEAQRDFLARLGCHACQGYLFCRPLPLDQFEAFVRRV 1169 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 91/254 (35%), Gaps = 9/254 (3%) Query: 10 ADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAH 69 + + ++ + + L E++IG + ++P + Sbjct: 492 SQNQLQATFDAIPDPLFVLGLDGRYYDCRSSRADLLAAPAEDLIGKTVSDVLPPEAASIC 551 Query: 70 PEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRDASV 127 +R E G + + +L + W ++++ S + ++ L RD + Sbjct: 552 LSALREANEKGTSTGKQFELQLAHGRA-----WFELSVARKSVGQRQEPRFIVLSRDITE 606 Query: 128 EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI 187 +E R A + + V D + +++ NRAFTE+ GY E G P LL Sbjct: 607 RKQAEEALRIAATAFE-SQEGMTVTDAQGAVLRINRAFTEITGYSADEVVGHNP-RLLQS 664 Query: 188 PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSD 247 + + + +T Q E + GE SI+ V + + + V TF D Sbjct: 665 GRHDKAFYAAMWESIRRTGSWQGEIWNRRKNGEAYPELLSITAVKENGGIVTHYVGTFMD 724 Query: 248 ITEERQIRQLEGNI 261 IT + N+ Sbjct: 725 ITRRKAAEDEIRNL 738 Score = 68.5 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 54/142 (38%), Gaps = 7/142 (4%) Query: 3 LTDADNAADGI-FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 +T+ A + + ++ G + + V+ N A ++ GY +EV+G+N +L Sbjct: 604 ITERKQAEEALRIAATAFESQEGMTVTDAQGAVLRINRAFTEITGYSADEVVGHNPRLLQ 663 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYL 119 H + R E+ +K+G +++ V G + +Y+ Sbjct: 664 SGR----HDKAFYAAMWESIRRTGSWQGEIWNRRKNGEAYPELLSITAVKENGGIVTHYV 719 Query: 120 ALVRDASVEMAQKEQTRQLIIA 141 D + A +++ R L Sbjct: 720 GTFMDITRRKAAEDEIRNLAFF 741 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 736 bits (1902), Expect = 0.0, Method: Composition-based stats. Identities = 149/591 (25%), Positives = 286/591 (48%), Gaps = 29/591 (4%) Query: 226 ASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIES- 284 + + + V+ + I E+ + + + + + I Sbjct: 115 INHNKLRAVIGQCMTSIKWERQIREQEKFIRKLSRAVEQSPVAIIITDTSGTIEYVNPRF 174 Query: 285 --VLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQ 335 + + L++G I W R+++G Sbjct: 175 TQLTGYTSAETIGKKPHILKSGETPPEEYRKLWEIISGGGEWWGEFHNRKKNGELYWASA 234 Query: 336 IK---TSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHN 392 T+ + + FI DI+ E++++ + I+Q+ +D +TGLPNR+ + Sbjct: 235 SISPITNGNEQITHFIAFQEDIT--------ERKQAEETIKQMAYYDTLTGLPNRHLFNE 286 Query: 393 YLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPD-QYL 447 + + +A V + +D + + D+LG+ DQ L +R +E + D + Sbjct: 287 LMHLALAQAHRHNRLLAVLFLDLDRFKHINDTLGHTVGDQLLQASAHRLKECCRRDRDTV 346 Query: 448 CRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKN 504 R G +F+++ + +DV ++A ++ + ++ ++ D ++ IGIS G++ Sbjct: 347 ARRGGDEFIILLPDIDDVQEAVRVAQKIIDAFTQVFVLPDIELFISTCIGISIFPNDGRD 406 Query: 505 RDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQ 564 + L+ A AM ++ G + + ++ +M+E RL + +L++A+ + L YQP+ Sbjct: 407 TETLIKNADMAMYRAKEQGRSRYHLYTSSMDEQAFRRLTMENSLRKALQREEFSLYYQPK 466 Query: 565 IFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRS 624 + +TG++ +EAL RW +P G + P++FIPLAE+ G I +G WV+ AC Q W+ Sbjct: 467 VNIKTGQIVCLEALVRWQNPEMGLILPNQFIPLAEDTGLIIPLGEWVLRTACAQNKTWQL 526 Query: 625 QNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRI 684 N ++VN S F+ +L + V + + L +E+TE++M+++ + + + Sbjct: 527 LNYPPMRVAVNFSPRQFQQPRLTDMVEQILGEADLAPCWLELELTENVMLQNVEKTVQTL 586 Query: 685 QILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIG 744 L ++G+ +S+DDFGTG+S LS + LP+ +KID+SFV T A+ A+ ++ Sbjct: 587 NRLSNLGIHISIDDFGTGYSSLSYIKKLPIQTLKIDRSFVHDINTNADDAAIAIAVITMA 646 Query: 745 QSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 QSL L V+AEGVET EQ ++L ++C +QGY FS+PLP E+ +S++ Sbjct: 647 QSLRLNVIAEGVETLEQMKLLDGLNCPEMQGYLFSKPLPVAEMTTLLSNIK 697 Score = 108 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 1/133 (0%) Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 Q++ R+L AV+ +I+ D I N FT++ GY +E G +P +L Sbjct: 138 REQEKFIRKLSRAVEQSPVAIIITDTSGTIEYVNPRFTQLTGYTSAETIGKKPH-ILKSG 196 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 E P + +L +++ EF + GE W ASISP+ + + + + DI Sbjct: 197 ETPPEEYRKLWEIISGGGEWWGEFHNRKKNGELYWASASISPITNGNEQITHFIAFQEDI 256 Query: 249 TEERQIRQLEGNI 261 TE +Q + + Sbjct: 257 TERKQAEETIKQM 269 Score = 82.8 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 51/128 (39%), Gaps = 6/128 (4%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 A+EQ+ + ++ + + + + NP +L GY E IG +L + P + Sbjct: 147 LSRAVEQSPVAIIITDTSGTIEYVNPRFTQLTGYTSAETIGKKPHILKSGETPPEEYRKL 206 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLALVRDASVEMAQ 131 GG E KK+G W ++S ++ + +++A D + Sbjct: 207 WEIISGGGE----WWGEFHNRKKNGELYWASASISPITNGNEQITHFIAFQEDITERKQA 262 Query: 132 KEQTRQLI 139 +E +Q+ Sbjct: 263 EETIKQMA 270 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 736 bits (1902), Expect = 0.0, Method: Composition-based stats. Identities = 197/871 (22%), Positives = 364/871 (41%), Gaps = 107/871 (12%) Query: 9 AADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPA 68 A + L+ + + + ++ R E++G + ++P + Sbjct: 185 ALNQRLQSTLDALPDLLFETDMDGRYLAYHS--------PRSELLGKTLHRVLPVAVADI 236 Query: 69 HPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS--AEGKVYYLALVRDAS 126 + G + +++QL DG+ W + S+ ++ L RD + Sbjct: 237 CLAAVHEANAVGYS----HGKQIQLALPDGA-HWFELSASRKPGLPGDAPTFIVLSRDIT 291 Query: 127 VEMAQK---EQTRQLIIAVDHLDRPVIVLDPERHIV------QCNRAFTEM--------- 168 + E+ +L A+ ++ ++ + N +M Sbjct: 292 ERKKAEIKIERLTKLYAALSQCNQAIVRCSDASELFPIICRDAVNFGGMKMAWIGMLDEA 351 Query: 169 ---------FGYCISEASGMQPDTLLNIP--EFPADNRIRLQQLLW-KTARDQDEFLLLT 216 FG + G++ L+ P IR + W + + D Sbjct: 352 DQLIKPAASFGSGVEYLEGIEISVDLSGDKGRGPTGTSIREDRPFWCQDFQHDDATAAWH 411 Query: 217 RTGEKI-WIKASISPV-------------------YDVLAH---------LQNLVMTFSD 247 GE+ W ++ P+ +D A + + F+D Sbjct: 412 ERGERFGWGASASLPLHLKDRVIGAFTLYAGEACAFDEAAQNLLLEMALDISFALDRFAD 471 Query: 248 ITEERQ----IRQLEGNILAAMCSSPPFHEMGEII-------CRNIESVLNESHVSLFAL 296 E + +R E A +SP + ++ E + H + Sbjct: 472 ERERKIMQDDLRDSEERYRKAFQTSPDAVNITRLVDGLYVDVNTGFERITGWRHDEVVGK 531 Query: 297 RNGMPIHWASSSHGAEIQNA-------QSWSATIRQRDGAPA-GILQIKTSSGAETSAFI 348 W + + + +A + AT +++G G++ + + + Sbjct: 532 TATELNLWGNPADRMRLVDALQSEGRCNNLEATFVKKNGDIFHGLMSAEKVRFKDVDCIL 591 Query: 349 ERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP---- 404 DI+ E++ + I+QL FD +TGLPNR+ LH+ + A Sbjct: 592 SITRDIT--------EKKLAEAQIQQLAHFDQLTGLPNRSQLHDRFRYALSLAQRHGDQL 643 Query: 405 VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDV 464 + + +DH +++ D+LG++ DQ L++V R + L+ + L R+ G +F+L+ D Sbjct: 644 AIMFLDLDHFKNINDTLGHSVGDQLLVDVSRRLKAALREEDSLSRLGGDEFILLLPGTDE 703 Query: 465 SNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKN 522 + +Q+A +L V++P I+ T+SIGI+ + G++ + L A AM +++ Sbjct: 704 AQASQVATKLLAAVAQPCQIEQNELVSTVSIGIALYPNDGQDFETLSKNADAAMYRVKQA 763 Query: 523 GGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWH 582 N ++FF+ M L L AL+ A+ ++ +L +QPQ+ + G + G EAL RW Sbjct: 764 SRNDFRFFTQEMQTHSARTLQLVNALRHALPRHEFELHFQPQVALQDGHIVGAEALLRWR 823 Query: 583 DPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFR 642 P G + P+ FIP+AE+ G+I IG WV+ A RQL +W + ++VNLSA+ FR Sbjct: 824 HPELGMISPAEFIPIAEDSGQILAIGEWVLRTAVRQLKQWLDAGLRPMVIAVNLSAVQFR 883 Query: 643 SNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTG 702 L V+ + + L +E+TE+ M+ + L + G+ +S+DDFGTG Sbjct: 884 HPNLMALVTRILDEAALPPEFLELELTEAAAMDDPPAAIAIMNKLDEHGIRMSIDDFGTG 943 Query: 703 FSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQF 762 +S LS L V ++KID+SFV + A++ AI ++ SL + +AEGVET Q Sbjct: 944 YSSLSYLKKFKVNKLKIDQSFVRDISDDPDDKAIVTAIINLASSLGMHTIAEGVETASQL 1003 Query: 763 EMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 LR C +QGY+ S+PLP ++ ++ + Sbjct: 1004 AFLRLQGCDEVQGYYVSKPLPKDQFEAFVRN 1034 Score = 55.8 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 51/140 (36%), Gaps = 5/140 (3%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINE-NDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + D ++ + A + + + + + N E++ G++ +EV+G L Sbjct: 478 MQDDLRDSEERYRKAFQTSPDAVNITRLVDGLYVDVNTGFERITGWRHDEVVGKTATELN 537 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLAL 121 +P + ++ + E KK+G + KV + L++ Sbjct: 538 LWG----NPADRMRLVDALQSEGRCNNLEATFVKKNGDIFHGLMSAEKVRFKDVDCILSI 593 Query: 122 VRDASVEMAQKEQTRQLIIA 141 RD + + + Q +QL Sbjct: 594 TRDITEKKLAEAQIQQLAHF 613 >UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=4 Tax=Comamonadaceae RepID=A1W7N9_ACISJ Length = 1047 Score = 736 bits (1902), Expect = 0.0, Method: Composition-based stats. Identities = 198/701 (28%), Positives = 316/701 (45%), Gaps = 33/701 (4%) Query: 120 ALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLD-PERHIVQCNRAFTEMFGYCISEASG 178 AL + A +E +L + + D +V+ N+ F ++ GY E Sbjct: 345 ALDHAKETDTALRESEARLRAVFNQAAVGIAQTDSRTGRLVRMNQKFCDLLGYSAQELQQ 404 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 M+ + AD + L + + + E + G ++W+ +SP+ + Sbjct: 405 MRFQDFSEPSDLAADLEQLQRMLAGELSEYRMEKRYRRKDGSEVWVDLMVSPLR-LEGQP 463 Query: 239 QNLVMTFSDITEE-------RQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVL--NES 289 ++ + DI++ RQ + NIL M + G+I+ RN V Sbjct: 464 EHHLAVVQDISKRKHMEQVLRQSEEPLRNILNHMPVGVNQVQDGKIVFRNDRHVQICGYD 523 Query: 290 HVSLFALRNGMPI---HWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSA 346 + + H E +A +A ++ DGA + + T+ A Sbjct: 524 IREAPDVDTWWRLVMPDAHQREHAREAWHAAC-TAALKNPDGAIRTVECVITAKSGVRRA 582 Query: 347 FI---ERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS 403 + D +++ + + + L DP+TGLPNR L + L+ + + Sbjct: 583 VELSGMILGDSHIVTMVDQSQRKAAEEEVRYLAYNDPLTGLPNRRLLLDRLEQALAMSAR 642 Query: 404 P----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVS 459 V ++ +D+ + + ++ G D+ L EV R R+ + D+ L R G +FV+V Sbjct: 643 HQLCGAVMMLDLDNFKTINETQGPDMGDRLLREVARRLRDCVPEDETLARHGGDEFVVVL 702 Query: 460 --LENDVSNITQIADE----LRNVVSKPIMIDDKPFPLTLSIGISYDLG--KNRDYLLST 511 L D A+E + + P ID + LS+GI+ G ++ D LL Sbjct: 703 KDLGADPQEAANRAEEMGQTILAAIRAPFDIDGQQHHTALSVGIAIFRGVRESADELLKR 762 Query: 512 AHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGE 571 + AM + G + +FF P M V ER L A L+ + QL+L YQP++ G Sbjct: 763 SDLAMYEAKAAGRDTLRFFDPQMQAAVSERAALEADLRAGLDAGQLELFYQPKVD--QGR 820 Query: 572 LYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN-IHIP 630 + G EAL RW P G + P+ FIPLAEE G I +G WV+ AC QLA+W + + Sbjct: 821 ITGAEALVRWRHPDRGFISPAEFIPLAEESGLILRVGEWVMRSACAQLAQWSAHPVLGEL 880 Query: 631 ALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDM 690 ++VN+S F QV +A+ A G D +L +E+TE M+++ + ++ LR Sbjct: 881 TVAVNVSPRQFHEGSFVPQVLEALAASGADARRLRLELTEGMLLQDVEDTIAKMVQLRGY 940 Query: 691 GVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLT 750 GVG S+DDFGTG+S L+ L LP+ E+KIDKSFV LT+ + I ++G SL L Sbjct: 941 GVGFSLDDFGTGYSSLAYLKRLPLHELKIDKSFVRDVLTDPNDAVIARTIVALGTSLGLR 1000 Query: 751 VVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 VVAEGVET+ Q L + C QGY S PL A + Sbjct: 1001 VVAEGVETEAQRAFLERNGCHAWQGYLLSPPLQAAAFEALV 1041 Score = 95.1 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 100/275 (36%), Gaps = 25/275 (9%) Query: 2 KLTD-ADNAADGIFFPALEQNMMGAVLIN-ENDEVMFFNPAAEKLWGYKREEVIGNNIDM 59 K TD A ++ Q +G + ++ N L GY +E+ Sbjct: 350 KETDTALRESEARLRAVFNQAAVGIAQTDSRTGRLVRMNQKFCDLLGYSAQELQQMRFQD 409 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV-YY 118 A E ++ G + E + +KDGS++W +S + EG+ ++ Sbjct: 410 FSEPSDLAADLEQLQRMLAG---ELSEYRMEKRYRRKDGSEVWVDLMVSPLRLEGQPEHH 466 Query: 119 LALVRDASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS 174 LA+V+D S ++ RQ L ++H+ V + + IV N ++ GY I Sbjct: 467 LAVVQDISKRKHMEQVLRQSEEPLRNILNHMPVGVNQV-QDGKIVFRNDRHVQICGYDIR 525 Query: 175 EASGMQPDTLLNIPEFPADNRIR--------LQQLLWKTARDQDEFLLLTRTGEKIWIKA 226 EA + L +P+ R A E ++ ++G + ++ Sbjct: 526 EAPDVDTWWRLVMPDAHQREHAREAWHAACTAALKNPDGAIRTVECVITAKSGVRRAVEL 585 Query: 227 SISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNI 261 S + D ++T D ++ + + + Sbjct: 586 SGMILGDSH------IVTMVDQSQRKAAEEEVRYL 614 >UniRef50_A6UJR0 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Alphaproteobacteria RepID=A6UJR0_SINMW Length = 1071 Score = 736 bits (1900), Expect = 0.0, Method: Composition-based stats. Identities = 200/822 (24%), Positives = 357/822 (43%), Gaps = 44/822 (5%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + DA ++ F + + + + + FFN + G E +G +I Sbjct: 259 RAADALRESEARFRAIADDAPVMIWVADPTGDTSFFNRLWLETTGQTEAEALGFGWVDVI 318 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWT-RFALSKVSAEGK-VYYL 119 D R A E G E +L + DGS W + SA+G + Y+ Sbjct: 319 HPDDRQAVQEIFFKATAGKGP----TRSEYRLRRADGSWAWVIDVGQPRFSADGTFLGYV 374 Query: 120 ALVRDASVEMA----QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS- 174 V D + A Q+E + D V VLD E + N A +FG Sbjct: 375 GSVLDITDRRAGEIAQQEAQAFIRSIFDSSPDCVRVLDLEGRPLLMNEAGRRIFGLNEDA 434 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 +G D++ A + + + E + GE+ + +P+ D Sbjct: 435 PITGQTWDSI--GRASDAHKVEAGWESVRHGKTARFEITVRDAGGEERCMDVIAAPITDN 492 Query: 235 LAHLQNLVMTFSDITEER----QIRQLEGNILAAMCS-----SPPFHEMGEIICRNIESV 285 L ++ + DIT+ + +I + + + AA + + Sbjct: 493 LGKPSRILSIWRDITDAKLASDEISRAQKHAEAAASQLSSVLESTMDSVMLLDADWRVRY 552 Query: 286 LNESHVSLFALRNGM--PIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSS-GA 342 LNE+ L + + W A+ + +R + S G Sbjct: 553 LNENAKKLLQIGDEALGKKFWKLFPEEEMGNFAKHCREVMERR---VRSFFEDHLPSLGR 609 Query: 343 ETSAFIERVADISQHMAALALEQEKSRQ-------HIEQLIQFDPMTGLPNRNNLHNYLD 395 A D E+ ++ + + + + D +TGLPNR + Sbjct: 610 WIEANASPTQDGISIFCRDITERRRAEEDTLLAQKQLAHMARHDMLTGLPNRMFFRECFE 669 Query: 396 DLVDKAV--SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGT 453 ++++ V + +D + + D+LG+ D L +V R + ++ + + R+ G Sbjct: 670 QALNESRHARMAVLCLDLDGFKAINDTLGHPAGDVLLRQVSQRLIQSVRTTETVARLGGD 729 Query: 454 QFVLVSLEN-DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLS 510 +F ++ +A L + +S+P I+ + SIGI++ + G + D L+ Sbjct: 730 EFAIIQPLAKSRDEAFHLAQRLIDTLSEPFSIEGAAATVGTSIGIAFAPEDGTSADELIK 789 Query: 511 TAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETG 570 A A+ + +G ++ F AM+ ++ + A+++A++N + +L YQP + E+ Sbjct: 790 AADIALYSAKSSGRGTYRLFDVAMHAQLQAHQQMKVAMRDALANREFELHYQPLVNLESR 849 Query: 571 ELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIP 630 + EAL RW P G + PS FIP+AEE G I IG W++ EACRQ A W + Sbjct: 850 CVSCCEALLRWRHPQRGMIAPSEFIPIAEETGAIVLIGEWLLDEACRQAARWPER----V 905 Query: 631 ALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDM 690 +++VNLS + F+ L V++A+ + +D +L +EITE+++++ + +Q LR + Sbjct: 906 SVAVNLSPVQFKHRNLVGAVANALSSSHLDPARLQLEITETVLLDESEHNLELLQDLRRL 965 Query: 691 GVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLT 750 GV +++DDFGTG+S L L S P +IK+D++FV + LA+++A+ +GQSL +T Sbjct: 966 GVKIAMDDFGTGYSSLGYLRSFPFDKIKVDQAFVRDLPHGRESLAIVKAVAGLGQSLGMT 1025 Query: 751 VVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 EGVET++Q ++ +QGY FSRPLPA EI ++ Sbjct: 1026 TTVEGVETEDQLAIVNSEGFDEVQGYLFSRPLPAAEISRLIA 1067 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 142/442 (32%), Gaps = 60/442 (13%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 + + A++ + ++ + + + EV+ P +L G +E +G + Sbjct: 134 IEETLRASEEHYRSLVDLHPQVPWIADRAGEVLEVGPRWSELTGLGEKETLGKGWAKAVH 193 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIW--TRFALSKVSAEGKVYYLA 120 A + R + G + E +L G W R A + + E V + Sbjct: 194 PQDAGALQDAWRRSLTNGTP----LDWEYRLLTMTGEYRWFRARAAAKRDADEKIVRWYG 249 Query: 121 LVRDASVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 L+ D + R + D + V DP NR + E G +EA Sbjct: 250 LLEDVDERRRAADALRESEARFRAIADDAPVMIWVADPTGDTSFFNRLWLETTGQTEAEA 309 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 G +++ + A + + + E+ L G W+ P + Sbjct: 310 LGFGWVDVIHPDDRQA-VQEIFFKATAGKGPTRSEYRLRRADGSWAWVIDVGQPRFSADG 368 Query: 237 HLQNLVMTFSDITEERQIRQLEGN----ILAAMCSSPPFHEMGEIICRNIESVLNESHVS 292 V + DIT+ R + I + SSP + ++ R ++NE+ Sbjct: 369 TFLGYVGSVLDITDRRAGEIAQQEAQAFIRSIFDSSPDCVRVLDLEGR--PLLMNEAGRR 426 Query: 293 LFALRNGMPI-------------------HWASSSHGAEIQNAQSWSATIRQRDGAPA-- 331 +F L PI W S HG + T+R G Sbjct: 427 IFGLNEDAPITGQTWDSIGRASDAHKVEAGWESVRHGK----TARFEITVRDAGGEERCM 482 Query: 332 -GILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNL 390 I T + + S + DI+ A + E ++++H E + L Sbjct: 483 DVIAAPITDNLGKPSRILSIWRDITDAKLA-SDEISRAQKHAEAAA-----------SQL 530 Query: 391 HNYLDDLVDKAVSPVVYLIGVD 412 + L+ +D V L+ D Sbjct: 531 SSVLESTMDS-----VMLLDAD 547 Score = 102 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 66/395 (16%), Positives = 129/395 (32%), Gaps = 34/395 (8%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 + +F ++ ++ + +F N AA L R E++G L+P + Sbjct: 10 SRRSYNLFQYLMDGVAEPVIVKDAGSRFVFINEAACFLLDKDRNELLGRTDHDLLPTEQA 69 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAE----GKVYYLALV 122 R G EG E Q+ DG+ VS + + + + Sbjct: 70 DKIVALDRVVLSTG----EGHEIEEQITTPDGTSRTLLTKKRPVSIPTGSTEEKFVVVTI 125 Query: 123 RDASVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 D + +E R VD + + D +++ ++E+ G E G Sbjct: 126 VDITELRGIEETLRASEEHYRSLVDLHPQVPWIADRAGEVLEVGPRWSELTGLGEKETLG 185 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 ++ + A ++ L E+ LLT TGE W +A + D + Sbjct: 186 KGWAKAVHPQDAGALQDA-WRRSLTNGTPLDWEYRLLTMTGEYRWFRARAAAKRDADEKI 244 Query: 239 QNLVMTFSDITEERQ----IRQLEGNILAAMCSSPPFHEMGEIIC------RNIESVLNE 288 D+ E R+ +R+ E A +P + + R + Sbjct: 245 VRWYGLLEDVDERRRAADALRESEARFRAIADDAPVMIWVADPTGDTSFFNRLWLETTGQ 304 Query: 289 SHVSLFALRNGMPIHWASSSHGAEIQNAQSW-------SATIRQRDGAPAGILQI---KT 338 + IH EI + +R+ DG+ A ++ + + Sbjct: 305 TEAEALGFGWVDVIHPDDRQAVQEIFFKATAGKGPTRSEYRLRRADGSWAWVIDVGQPRF 364 Query: 339 SSGAETSAFIERVADISQHMAALALEQEKSRQHIE 373 S+ ++ V DI+ A + Q++++ I Sbjct: 365 SADGTFLGYVGSVLDITDRRAGE-IAQQEAQAFIR 398 Score = 57.0 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 41/203 (20%), Positives = 71/203 (34%), Gaps = 10/203 (4%) Query: 126 SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 + E + +D + PVIV D V N A + +E G LL Sbjct: 5 TPEGPSRRSYNLFQYLMDGVAEPVIVKDAGSRFVFINEAACFLLDKDRNELLGRTDHDLL 64 Query: 186 NIPEFPADNRIRLQQLLWKTA-RDQDEFLLLTRTGEKIWIKASISPVYDVLA--HLQNLV 242 P AD + L +++ T + E + T G + PV + +V Sbjct: 65 --PTEQADKIVALDRVVLSTGEGHEIEEQITTPDGTSRTLLTKKRPVSIPTGSTEEKFVV 122 Query: 243 MTFSDITE----ERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRN 298 +T DITE E +R E + + + P + + +E S ++ + Sbjct: 123 VTIVDITELRGIEETLRASEEHYRSLVDLHPQVPWIADRAGEVLEVGPRWSELTGLGEKE 182 Query: 299 GMPIHWASSSHGAEIQNAQ-SWS 320 + WA + H + Q +W Sbjct: 183 TLGKGWAKAVHPQDAGALQDAWR 205 >UniRef50_A0JVV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Arthrobacter sp. FB24 RepID=A0JVV3_ARTS2 Length = 821 Score = 735 bits (1899), Expect = 0.0, Method: Composition-based stats. Identities = 223/817 (27%), Positives = 370/817 (45%), Gaps = 52/817 (6%) Query: 18 LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML-IPRDLRPAHPEYIRHN 76 L++ + ++E + ++N A+E+L+G + + +G I L I P Sbjct: 16 LDEIGQSVIGMDEQWRITYWNRASERLYGLRPGDALGMKITDLGIIGGAEPPGQRATVQE 75 Query: 77 REGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEG--KVYYLALVRDASVEMAQKEQ 134 A + EL + + G +S + V +A+ +D + + Sbjct: 76 IAETLAHGRDWAGELWMRHRTGRDFPVHATVSPIRGRHTVPVAVVAISKDITDRKHSEAI 135 Query: 135 TRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL--LNIPEFPA 192 R+L V+ +I D I N T MFG+ EA G L + F + Sbjct: 136 LRRLSAMVESSGDAIIGADLTGAITSWNAGATRMFGWSSREAVGQSYRLLTTRDASGFDS 195 Query: 193 DNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER 252 D R+ + T R G I ++ ++SPVY D+TE + Sbjct: 196 DVAARIGGGTFVTGV---HARWRCRDGSLIDVELTVSPVYGPDGAQVGASAIARDVTEIQ 252 Query: 253 QIRQLE----------------GNILAAMCSSPPFH--EMGEIICR------NIESVLNE 288 +++ G+I + + +H E II R E++L Sbjct: 253 RLKAAAAAERERLLAAQEMAHVGSIEYIVATGETWHSEEFSRIIGRADNALDTREAMLGL 312 Query: 289 SHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGI---LQIKTSSGAETS 345 +H L + W S +GA+ + + I + DG + ++ S Sbjct: 313 THPEDQDLVRQV---WKSLENGAD---SADFEYRILKGDGELRWLHSRIRSAKSPDGRPL 366 Query: 346 AFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPV 405 F++ V DI+ E++ + Q +E + D +TGLPNR + L +D+A PV Sbjct: 367 RFLDTVLDIT--------ERKNAEQILEWRARHDALTGLPNRYMVTEVLQGCLDRASRPV 418 Query: 406 VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVS 465 V + VD + + D +G+ D L+ + R + ++ + R G +FV+V + Sbjct: 419 VMFVDVDRFKLINDGIGHGAGDTILILLGERLKAAVRAGDTVARFGGDEFVVVCENLLMR 478 Query: 466 NITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGKNRDYL-LSTAHNAMDYIRKNGG 524 +A+ +R P +D + L +SIGI+ ++ L L A +AM + GG Sbjct: 479 GAKVLAERIRESTRLPFEVDGRRIYLNVSIGIALAGAEDTAELMLQGADSAMYRAKSAGG 538 Query: 525 NGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDP 584 + + M RL L + L+ A+ +L L YQP I T G EAL RWH P Sbjct: 539 DSSAVYDVRMTGSAAGRLDLESDLRLALGRGELSLNYQPIIEIATETPVGFEALLRWHHP 598 Query: 585 LHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ--NIHIPALSVNLSALHFR 642 +HG +PP FIP+AEE G I IG WV+ EA RQ+ EWR + + +VN+S Sbjct: 599 VHGSIPPDTFIPVAEETGLILPIGTWVLEEAFRQVQEWRRELCGAENFSAAVNVSGRQLV 658 Query: 643 SNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTG 702 + P+ V A+ A GID + +E+TE+++M+ + + L +GVGLS+DDFGTG Sbjct: 659 AKDFPDLVEAAILAAGIDPAAVHLEVTETVLMDQPDLPKETLHRLSRLGVGLSIDDFGTG 718 Query: 703 FSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQF 762 +S LS L L +KID++FV+ + ++E + + SL+L V+AEGVET++Q Sbjct: 719 YSSLSYLKWLSARTLKIDRTFVEELGNDPHGATIIELVLGMAGSLDLGVIAEGVETQDQL 778 Query: 763 EMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI 799 LR++ + QG+ +S+PLPAE +P W+++ LP I Sbjct: 779 SELRRLRVPLAQGFLWSKPLPAERVPAWLAAALPDAI 815 Score = 93.6 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 50/292 (17%), Positives = 97/292 (33%), Gaps = 27/292 (9%) Query: 3 LTDADNAADGIFF---PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDM 59 +TD + ++ I +E + + + + +N A +++G+ E +G + + Sbjct: 126 ITDRKH-SEAILRRLSAMVESSGDAIIGADLTGAITSWNAGATRMFGWSSREAVGQSYRL 184 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVY 117 L RD + R GG V G+ + +DGS I +S V +V Sbjct: 185 LTTRDASGFDSDVA--ARIGGGTFVTGVHA--RWRCRDGSLIDVELTVSPVYGPDGAQVG 240 Query: 118 YLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQC--------NRAFTEMF 169 A+ RD + ++ + A + I + F+ + Sbjct: 241 ASAIARDVTE----IQRLKAAAAAERERLLAAQEMAHVGSIEYIVATGETWHSEEFSRII 296 Query: 170 GYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASIS 229 G + + L PE R + L E+ +L GE W+ + I Sbjct: 297 GRADNALDTREAMLGLTHPEDQDLVRQVWKSLENGADSADFEYRILKGDGELRWLHSRIR 356 Query: 230 PVYDVLAHLQNLVMTFSDITEERQIRQL-----EGNILAAMCSSPPFHEMGE 276 + T DITE + Q+ + L + + E+ + Sbjct: 357 SAKSPDGRPLRFLDTVLDITERKNAEQILEWRARHDALTGLPNRYMVTEVLQ 408 Score = 82.8 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 64/168 (38%), Gaps = 4/168 (2%) Query: 137 QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL-LNIPEFPADNR 195 + +D + + VI +D + I NRA ++G +A GM+ L + P R Sbjct: 11 MQSLLLDEIGQSVIGMDEQWRITYWNRASERLYGLRPGDALGMKITDLGIIGGAEPPGQR 70 Query: 196 IRLQQLLWKTAR---DQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER 252 +Q++ A E + RTG + A++SP+ +V DIT+ + Sbjct: 71 ATVQEIAETLAHGRDWAGELWMRHRTGRDFPVHATVSPIRGRHTVPVAVVAISKDITDRK 130 Query: 253 QIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGM 300 + + A + SS ++ + + ++ R + Sbjct: 131 HSEAILRRLSAMVESSGDAIIGADLTGAITSWNAGATRMFGWSSREAV 178 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 735 bits (1899), Expect = 0.0, Method: Composition-based stats. Identities = 171/523 (32%), Positives = 264/523 (50%), Gaps = 15/523 (2%) Query: 277 IICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQI 336 + + E +L + L A ++ T ++DG+ I+ + Sbjct: 64 MFGYSAEELLEQMGPLDLILPEQHAFVIEQMQLRAAGVLGHNYELTGLRKDGSTLPIMVL 123 Query: 337 KTSSG-AETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLD 395 + S A + V DIS Q+ + Q I +L +D +TGLPNR L + Sbjct: 124 GSPSVIGGLPASVGTVLDISA--------QKAAEQRIRELADYDVLTGLPNRRLLRERFE 175 Query: 396 DLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIE 451 L+ A V + +DH + V DSLG++ D+ L EV R ++ L R+ Sbjct: 176 QLLAAAEREKSEIAVIFLDLDHFKRVNDSLGHSVGDELLCEVARRLDSVVRRIDTLARLG 235 Query: 452 GTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLL 509 G +F+ + ++A L V S+P + +T S+GIS G++ + LL Sbjct: 236 GDEFIFAMPGFHTAAAVEVARRLVEVFSRPFEVAGHELTVTPSLGISIYPHDGRDLETLL 295 Query: 510 STAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAET 569 A AM ++ G N +QF+S MN +RL++ + L+ A+ N+ L YQP + ET Sbjct: 296 RNADTAMYRAKEMGRNAFQFYSSEMNTTTLDRLLMESNLRRALVQNEFILHYQPLVNLET 355 Query: 570 GELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHI 629 G + G+EAL RW P G + P RFI +AEE G I IG WV+ EACRQ W + Sbjct: 356 GLIIGVEALIRWLHPELGLIMPDRFIHVAEETGLINPIGDWVLCEACRQAKAWCDAGLPP 415 Query: 630 PALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRD 689 ++VN++ + FR V+ A+ G+D +L +E+TE +M + L Sbjct: 416 ICMAVNVAPVQFRQAGFVEMVAGALATSGLDASRLELELTERTVMHDADINMGTLSALHR 475 Query: 690 MGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNL 749 MGV LS+DDFGTG+S L+ L PV ++KID+SFV+ T+ A+ I S+G+SL + Sbjct: 476 MGVELSLDDFGTGYSSLAYLKRFPVGKLKIDRSFVNDLETDPDDWAIASTIVSMGRSLRM 535 Query: 750 TVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 TV+AEGVE EQ +LRK+ C + QGY+FSRP+ A+ + + Sbjct: 536 TVLAEGVEKVEQLALLRKMGCDMAQGYYFSRPMSADGMADMLR 578 Score = 72.4 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 8/138 (5%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGN--NIDMLIPR 63 A + +F +E +G ++ +N + NP ++GY EE++ +D+++P Sbjct: 27 AMTEQETMFRSTMEAAQVGIFVL-QNQRFKYVNPFLVGMFGYSAEELLEQMGPLDLILPE 85 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVR 123 ++ + A V G + EL +KDGS + S G + V Sbjct: 86 -----QHAFVIEQMQLRAAGVLGHNYELTGLRKDGSTLPIMVLGSPSVIGGLPASVGTVL 140 Query: 124 DASVEMAQKEQTRQLIIA 141 D S + A +++ R+L Sbjct: 141 DISAQKAAEQRIRELADY 158 Score = 67.4 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 60/186 (32%), Gaps = 8/186 (4%) Query: 127 VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 A EQ ++ + VL + N MFGY E L Sbjct: 24 SATAMTEQETMFRSTMEAAQVGIFVLQNQ-RFKYVNPFLVGMFGYSAEELLEQMGPLDLI 82 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 +PE A ++Q E L + G + I SP V+ L V T Sbjct: 83 LPEQHAFVIEQMQLRAAGVLGHNYELTGLRKDGSTLPIMVLGSP--SVIGGLPASVGTVL 140 Query: 247 DIT-----EERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMP 301 DI+ E+R + ++L + + E E + E +E V L + Sbjct: 141 DISAQKAAEQRIRELADYDVLTGLPNRRLLRERFEQLLAAAEREKSEIAVIFLDLDHFKR 200 Query: 302 IHWASS 307 ++ + Sbjct: 201 VNDSLG 206 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 735 bits (1898), Expect = 0.0, Method: Composition-based stats. Identities = 168/586 (28%), Positives = 266/586 (45%), Gaps = 29/586 (4%) Query: 219 GEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEII 278 G ++ I + + L F++ +E I + I+A + +I Sbjct: 297 GANEHLEERIQTLRLTESELHLYANVFTNASEGMAITDAQARIVAVNPA------FTDIT 350 Query: 279 CRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGI--- 333 +IE + + L + R + A + W I R+R G Sbjct: 351 GYSIEEIHGRTPAVLASGRQDAAFY---REMWATLGKRGQWQGEIWNRRRSGEIYPEWLS 407 Query: 334 LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNY 393 + T S +I +DI+ ++++S I L D +TGLPNR L + Sbjct: 408 ITAITEGDGGVSHYIGIFSDIT--------DRKESEARIRHLAHHDALTGLPNRLLLQDR 459 Query: 394 LDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCR 449 L + KA V + +D + + D+LG+ D L +V R ++ + R Sbjct: 460 LGQAILKARRNSTQAAVLFLDLDRFKTINDTLGHEIGDGLLRQVTQRCLGAVRETDTVAR 519 Query: 450 IEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRD 506 G +FV+V + + IA ++ +++P + +T SIGI+ G + Sbjct: 520 QGGDEFVIVLPDLEHGQDAGTIARKILAALTEPCRLGPHELTVTGSIGIALYPGDGADPS 579 Query: 507 YLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIF 566 LL A AM + +G NG+QF++ MN L+L L+ A+ N+L+L +QP++ Sbjct: 580 MLLRNADAAMYRAKADGRNGFQFYAADMNTHSLGELLLEHQLRGALDRNELRLYFQPKVN 639 Query: 567 AETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN 626 A G + G EAL RW P G + P RF+P AEE G I IG WV+ EACRQL W Sbjct: 640 AADGCIEGCEALLRWQHPDLGLLAPGRFVPAAEESGLIVPIGEWVLREACRQLRAWIDAG 699 Query: 627 IHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQI 686 + ++VNLS F + V +A+ + L +E+TE+M+M + Sbjct: 700 LAPVPVAVNLSGQQFAHQDIVALVREALAEHRLPAPMLELELTETMLMRDLERTIATLAE 759 Query: 687 LRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQS 746 LR MGV L++DDFGTG+S L+ L V +KID+SFV + A+ ++ + Sbjct: 760 LRAMGVTLAIDDFGTGYSSLAYLRQFDVNALKIDRSFVHDIRPGSSDGKIATAVIALAHN 819 Query: 747 LNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 L LTV AEGVET Q L + C +QG+ F +P PAE ++ Sbjct: 820 LGLTVTAEGVETAAQQHFLARHGCDQLQGFLFGQPEPAEAFAQRLA 865 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 85/244 (34%), Gaps = 7/244 (2%) Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 + + + + + D + IV N AFT++ GY I E G P + Sbjct: 306 IQTLRLTESELHLYANVFTNASEGMAITDAQARIVAVNPAFTDITGYSIEEIHGRTP-AV 364 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 L A + L K + Q E R+GE SI+ + + + + + Sbjct: 365 LASGRQDAAFYREMWATLGKRGQWQGEIWNRRRSGEIYPEWLSITAITEGDGGVSHYIGI 424 Query: 245 FSDITEERQIRQLEGNI--LAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPI 302 FSDIT+ ++ ++ A+ P + + + + I S + + Sbjct: 425 FSDITDRKESEARIRHLAHHDALTGLPNRLLLQDRLGQAILKARRNSTQAAVLFLDLDRF 484 Query: 303 HWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALA 362 + + G EI + T R GA + G E F+ + D+ A Sbjct: 485 KTINDTLGHEIGDGLLRQVTQRCL-GAVRETDTVARQGGDE---FVIVLPDLEHGQDAGT 540 Query: 363 LEQE 366 + ++ Sbjct: 541 IARK 544 Score = 68.5 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 56/157 (35%), Gaps = 9/157 (5%) Query: 8 NAADGIFFP-ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 ++ + G + + ++ NPA + GY EE+ G +L Sbjct: 312 TESELHLYANVFTNASEGMAITDAQARIVAVNPAFTDITGYSIEEIHGRTPAVLASGRQD 371 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS--AEGKVYYLALVRD 124 A + G + + +G E+ ++ G +++ ++ G +Y+ + D Sbjct: 372 AAFYREM-WATLGKRGQWQG---EIWNRRRSGEIYPEWLSITAITEGDGGVSHYIGIFSD 427 Query: 125 ASVEMAQKEQTRQL--IIAVDHLDRPVIVLDPERHIV 159 + + + R L A+ L +++ D + Sbjct: 428 ITDRKESEARIRHLAHHDALTGLPNRLLLQDRLGQAI 464 >UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TLA6_ACIAC Length = 1120 Score = 734 bits (1897), Expect = 0.0, Method: Composition-based stats. Identities = 198/799 (24%), Positives = 346/799 (43%), Gaps = 48/799 (6%) Query: 29 NENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMS 88 + + A E+L G +V+ + L R + + G S Sbjct: 311 DGRRRFVHMGEALERLVGVSAADVM-EDAQRLFDRIDPEDRAAQAEADEVSYRTMGVGES 369 Query: 89 RELQLEKKDGSKIWTRFALSKVSAEGKVYYL---ALVRDASVEMAQKEQTR----QLIIA 141 +++ + DG+ W R + S +G + ++ D + + ++ +R QL Sbjct: 370 V-VRMRRMDGAPRWIRLSSSPRLLQGGSGRVIWDGVLTDVTQQREAQDLSRAHEIQLASL 428 Query: 142 VDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQL 201 + + + LD + I+ N + + E G + +L+ + + LQ L Sbjct: 429 LGRMPGGISRLDRDLRILYVNPSQAQWLRRTPQELEGQRASDVLSAELLQSLHPHMLQAL 488 Query: 202 LWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER----QIRQL 257 + ++ R + +I P + +++ D+TE++ ++ Q Sbjct: 489 --QGRPVVFDYRSPYRGAGPEFFHTTIIPETGPDGRVVAIMVFAVDVTEQKHLALELSQQ 546 Query: 258 EGNILAAMCSSPPFHEMGEIICR------NIESVLNESHVSLFALRNGMPIHWASSSHGA 311 + + + + P + + R E L + L + + ++ Sbjct: 547 RSRLASLVNAIPDVVFLKDAAGRYLSCNPVFERYLGRRERDIVGLGDEELMTPVEAARVR 606 Query: 312 EIQNAQS--WSATIRQR------DGAPAGILQIKTSSGAETSAFIERVADISQHMAALAL 363 ++ W + + DG IKT ++ ++ Sbjct: 607 QLDERAMAAWQPLVYEETLTFAEDGYAGYFETIKTPIRDMHGHVTGLLS-----VSRDIT 661 Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVID 419 +++K+ Q IE L FD +TGLPNR L + L + I +D+ +D+ D Sbjct: 662 DRKKAEQQIELLAFFDALTGLPNRRLLLDRLQRAGAACQRNEKLGALLFIDLDNFKDLND 721 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVS------NITQIADE 473 +LG+ D+ L++V R +E ++ + R G +FV++ D Q+A++ Sbjct: 722 TLGHDMGDRLLVQVAQRLQECVRTSDTVARFGGDEFVVMLEGLDADTALAALQAEQVAEK 781 Query: 474 LRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFS 531 L +++P + + T SIGI+ D + D LL A AM + G N +FF Sbjct: 782 LLAQLNRPFEMGAQQHYSTPSIGITLFGDQRRTVDELLKRADLAMYQAKAAGRNTQRFFD 841 Query: 532 PAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPP 591 P M V R L + L++ I+ ++L + QP + T L G EAL RW P+ G + P Sbjct: 842 PDMQAQVTARSQLESDLRQGIARHELTVHLQPIVDGST-RLCGAEALVRWRHPVKGLISP 900 Query: 592 SRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNI-HIPALSVNLSALHFRSNQLPNQV 650 + FIPLAEE G I +GR V+ AC QL W + ++VN+SA FR +V Sbjct: 901 ADFIPLAEETGLILPLGRQVLQTACEQLVRWATHPATASFTIAVNVSARQFRQPDFVAEV 960 Query: 651 SDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLV 710 + G + +L +E+TES+++ + R+ L+ +GVG ++DDFGTG+S LS L Sbjct: 961 LGTLAGTGANPQRLKLELTESLLLGDVEDTICRMAQLKRVGVGFALDDFGTGYSSLSYLK 1020 Query: 711 SLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHC 770 LP+ +KID+SFV LT+ A++ I ++ +SL+L VVAEGVET Q L+ C Sbjct: 1021 RLPLDLVKIDQSFVRDVLTDPNDAAIVRTILALAKSLDLQVVAEGVETAGQLSFLKLHGC 1080 Query: 771 RVIQGYFFSRPLPAEEIPG 789 QGY F RP+P E Sbjct: 1081 EGFQGYLFGRPVPLEAFER 1099 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 93/258 (36%), Gaps = 9/258 (3%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 D A + L + G ++ + +++ NP+ + +E+ G ++ + Sbjct: 416 DLSRAHEIQLASLLGRMPGGISRLDRDLRILYVNPSQAQWLRRTPQELEGQRASDVLSAE 475 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK-VYYLALVR 123 L + ++ +G + S + G + + + + +G+ V + Sbjct: 476 LLQSLHPHMLQALQGRPVVFDYRSP----YRGAGPEFFHTTIIPETGPDGRVVAIMVFAV 531 Query: 124 DASVEMAQK----EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 D + + +Q +L V+ + V + D + CN F G + G+ Sbjct: 532 DVTEQKHLALELSQQRSRLASLVNAIPDVVFLKDAAGRYLSCNPVFERYLGRRERDIVGL 591 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 + L+ E ++ + + +E L G + + +P+ D+ H+ Sbjct: 592 GDEELMTPVEAARVRQLDERAMAAWQPLVYEETLTFAEDGYAGYFETIKTPIRDMHGHVT 651 Query: 240 NLVMTFSDITEERQIRQL 257 L+ DIT+ ++ Q Sbjct: 652 GLLSVSRDITDRKKAEQQ 669 >UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=23 Tax=Pseudomonas RepID=A4Y0E0_PSEMY Length = 766 Score = 733 bits (1894), Expect = 0.0, Method: Composition-based stats. Identities = 185/698 (26%), Positives = 316/698 (45%), Gaps = 39/698 (5%) Query: 116 VYYLALVRDASVEMAQKEQT----RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY 171 + YL L R A + Q +L +A+D + D V + ++ + G Sbjct: 57 LLYLVLHRHAQQYRRARLQLTSNEERLRLALDATRDGLWDWDFAAQRVFFSPSYAALLGL 116 Query: 172 CISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDE--FLLLTRTGEKIWIKASIS 229 +A G D P D LQ L D + + L G W + Sbjct: 117 TP-QALGDTRDA-WAERLHPEDRERVLQALALDQQYDSYDNVYRLRHADGTYRWFHSRGR 174 Query: 230 PVYDVLAHLQNLVMTFSDITEER---QIRQLEGNILAAMCSSPPFHEMGEIICRNIESVL 286 + D Q + SDIT++R + + + A + + I + Sbjct: 175 LLRDEGGRPQRFIGIASDITQQRANDESLRQAAAVFDATQEGVLVTDPEQRIVHVNPAFS 234 Query: 287 NESHVSLFALRNGMPIHWASSSHGAEIQ--------NAQSWSATI--RQRDGAPAG---I 333 + S + P S H A N +WS + R++ G Sbjct: 235 RITGYSAEEVLGQHPTLLKSGRHDAAFYQSLWQALHNRDAWSGEVWNRRKSGEIYPQWQC 294 Query: 334 LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNY 393 +++ S ++ +DI+ ++S++ ++ L DP++ LPNR Sbjct: 295 IRVIHDEHGRISHYVAVFSDITA--------LKRSQRELDYLAHHDPLSNLPNRLLFTER 346 Query: 394 LDDLVDKAV----SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCR 449 + ++++ V LI +DH + + +SLG+ D L V R ++ L L R Sbjct: 347 IAHALERSKSEQLRGAVLLIDLDHFKHINESLGHNVGDLLLKSVGERLQQDLPGGCTLAR 406 Query: 450 IEGTQFVLVSLEN-DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRD 506 + G +F L+S D ++A L + P +D+ + SIGIS D + + Sbjct: 407 LGGDEFGLLSETCADAPQAAELAQNLLRCLEAPFRLDEHELYIGASIGISLFPDDADSVE 466 Query: 507 YLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIF 566 +L A +A+ + +G G+ F+ + + ++R+ L ++L+ A+ N++L++ YQP Sbjct: 467 QVLRNADSALFKAKSSGREGYAFYVQELTDYARQRVELASSLRHALDNHELRVFYQPLHD 526 Query: 567 AETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN 626 E G G+EAL RW P G +PP+ FIP+AE+ G I I WV+ +AC Q+ W ++ Sbjct: 527 LENGNPVGMEALVRWQHPQRGLIPPAEFIPIAEDNGMIGPIDAWVLEQACGQMMRWNAEG 586 Query: 627 IHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQI 686 + ++VN+S+ F +L +V+ + G+ QL +E+TES +ME + Sbjct: 587 SALRFVAVNVSSRLFSRGELDLKVAQVLAETGLSPQQLELEVTESAIMEDPDAALSLLTR 646 Query: 687 LRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQS 746 LR +GV L++DDFGTG+S L+RL LPV ++K+D+SFV + A+ A+ ++G S Sbjct: 647 LRALGVRLAIDDFGTGYSSLARLKRLPVDKLKLDQSFVRGLPDDIEDAAIARAVIALGHS 706 Query: 747 LNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPA 784 L L V+AEG+E+ Q + LR + C QGY F RP P Sbjct: 707 LGLNVLAEGIESPAQVDFLRALGCDYGQGYHFGRPAPV 744 Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats. Identities = 62/281 (22%), Positives = 103/281 (36%), Gaps = 8/281 (2%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP 67 + + AL+ G + + +FF+P+ L G + +G+ D L P Sbjct: 77 TSNEERLRLALDATRDGLWDWDFAAQRVFFSPSYAALLGLTPQ-ALGDTRDAWA-ERLHP 134 Query: 68 AHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIW--TRFALSKVSAEGKVYYLALVRDA 125 E + + + +L DG+ W +R L + ++ + D Sbjct: 135 EDRERVLQAL-ALDQQYDSYDNVYRLRHADGTYRWFHSRGRLLRDEGGRPQRFIGIASDI 193 Query: 126 SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 + + A E RQ D V+V DPE+ IV N AF+ + GY E G P TLL Sbjct: 194 TQQRANDESLRQAAAVFDATQEGVLVTDPEQRIVHVNPAFSRITGYSAEEVLGQHP-TLL 252 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 A L Q L E ++GE I ++D + + V F Sbjct: 253 KSGRHDAAFYQSLWQALHNRDAWSGEVWNRRKSGEIYPQWQCIRVIHDEHGRISHYVAVF 312 Query: 246 SDITEERQIRQLEGNILAA--MCSSPPFHEMGEIICRNIES 284 SDIT ++ ++ + + + P E I +E Sbjct: 313 SDITALKRSQRELDYLAHHDPLSNLPNRLLFTERIAHALER 353 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 733 bits (1894), Expect = 0.0, Method: Composition-based stats. Identities = 174/589 (29%), Positives = 280/589 (47%), Gaps = 36/589 (6%) Query: 224 IKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMG-EIICRNI 282 + I D + R +E + A + SS E E + Sbjct: 327 VTVEIRAHRDRHGRQAAEAAL------RLRERAIECSANAVIISSAQVPEFAIEYVNPAF 380 Query: 283 ESVLNESHVSLFALRNGMPIHWASSSHG-----AEIQNAQSWSATIR--QRDGAPAG--- 332 E + + + + G A + + A +R +++G+ Sbjct: 381 ERITGYTAAEAIGRSSSFLLRNDHEQAGLYEIRAALAEKREGKAVLRNYRKNGSLFWNDL 440 Query: 333 -ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLH 391 I +K G T+ F+ ++DI+ ++ + +L D +TGLPNR L Sbjct: 441 YIAPVKDDEGK-TTHFVAAMSDITPM--------KQYETTLHRLASHDVLTGLPNRALLQ 491 Query: 392 NYLDDLVDKAVSPV----VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYL 447 + L++ + + V L+ +D + V D++G+ D L + +R + ++ + Sbjct: 492 DRLENAIAYSARNGHAVWVVLVDLDRFKFVNDTMGHQAGDVLLKIISDRLQASVRESDTV 551 Query: 448 CRIEGTQFVLVSLEND---VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLG 502 R+ G +FVLV E + + + V KP+ I F L+ S+GI+ + G Sbjct: 552 ARLGGDEFVLVLPECGDGPSGYSSDVIQRIMEAVVKPLTIQGSEFFLSCSMGIAVYPNDG 611 Query: 503 KNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQ 562 + LL+ A AM ++ G N +QF++PAMN+ ERL + L+ AI N+L L YQ Sbjct: 612 ADPTTLLAHADVAMYRSKELGRNNFQFYTPAMNDQALERLRIEGELRHAIELNELVLHYQ 671 Query: 563 PQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEW 622 PQ+ TG + G+EAL RW+ P+ G V P FI LAEE G I IG WV+ ACRQ W Sbjct: 672 PQVDLHTGAIVGLEALVRWNHPILGMVQPGSFISLAEETGLIIPIGAWVLQTACRQAKAW 731 Query: 623 RSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFK 682 + ++VNLSA F L + D + G++ L +E+TES +M Sbjct: 732 QDMGFTQLRIAVNLSARQFTQASLLESIKDTLQETGLEARFLEIELTESSVMADIERNIL 791 Query: 683 RIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITS 742 ++ L+ +GV LSVDDFGTG S L+ L P+ +KID+SFV + +++ +I S Sbjct: 792 TLRDLKSLGVQLSVDDFGTGHSSLAYLKRFPIDTLKIDRSFVRDIAINQDDASIVSSIIS 851 Query: 743 IGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 + +L L V+AEGVET Q ++LR C IQGY+F +PLP+++I + Sbjct: 852 LAHNLKLNVIAEGVETASQMDILRAQGCNEIQGYYFCKPLPSDQIETLL 900 Score = 93.6 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 51/149 (34%), Gaps = 4/149 (2%) Query: 119 LALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLD---PERHIVQCNRAFTEMFGYCISE 175 + RD A + R A++ VI+ PE I N AF + GY +E Sbjct: 331 IRAHRDRHGRQAAEAALRLRERAIECSANAVIISSAQVPEFAIEYVNPAFERITGYTAAE 390 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL 235 A G LL + ++ L + + + G W I+PV D Sbjct: 391 AIGRSSSFLLR-NDHEQAGLYEIRAALAEKREGKAVLRNYRKNGSLFWNDLYIAPVKDDE 449 Query: 236 AHLQNLVMTFSDITEERQIRQLEGNILAA 264 + V SDIT +Q + + Sbjct: 450 GKTTHFVAAMSDITPMKQYETTLHRLASH 478 Score = 67.8 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 63/174 (36%), Gaps = 24/174 (13%) Query: 8 NAADGIFF---PALEQNMMGAVLINEN---DEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 AA+ A+E + ++ + + + NPA E++ GY E IG + L+ Sbjct: 341 QAAEAALRLRERAIECSANAVIISSAQVPEFAIEYVNPAFERITGYTAAEAIGRSSSFLL 400 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYL 119 D A + R + EG + L+ +K+GS W ++ V + +++ Sbjct: 401 RNDHEQA---GLYEIRAALAEKREGKAV-LRNYRKNGSLFWNDLYIAPVKDDEGKTTHFV 456 Query: 120 ALVRDASVEMAQKEQTRQL------------IIAVDHLDRPVIVLDPERHIVQC 161 A + D + + +L + D L+ + H V Sbjct: 457 AAMSDITPMKQYETTLHRLASHDVLTGLPNRALLQDRLENAIAYSARNGHAVWV 510 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 18/151 (11%), Positives = 45/151 (29%), Gaps = 3/151 (1%) Query: 154 PERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFL 213 P+ ++ ++ ++G L NI + + L + + Sbjct: 64 PDGQVIYASKTVEALYGSSPERFYANSRLWLENIAPADREPALELLGSILHEPQQTLRLR 123 Query: 214 LLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHE 273 + G WI+ + D ++ + +DIT + A+ H+ Sbjct: 124 INRSDGSPRWIEYHARFIPDTDGRSGHVKLIGTDITTRHHLEIALARSNRAL---RAIHD 180 Query: 274 MGEIICRNIESVLNESHVSLFALRNGMPIHW 304 ++I ++ + G + W Sbjct: 181 CEDVISEAVDENALLQGICDVVTATGYRMAW 211 >UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFI2_HAHCH Length = 913 Score = 733 bits (1894), Expect = 0.0, Method: Composition-based stats. Identities = 176/823 (21%), Positives = 329/823 (39%), Gaps = 52/823 (6%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREE--VIGNNIDMLIPR 63 A + A + +G + + ++++ + G + + Sbjct: 85 ALRESRNNLDKAQQIARLGNWVWDLKRNEVYWSDQVYRNLGLSLHDNKASYEKFLECVHP 144 Query: 64 DLRPAHPEYIRHNRE-----GGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYY 118 D R + + E G + RV E ++ G I+ V Sbjct: 145 DDRARIVKLVDEALENKQVYGIEHRVIWPDGEERIVCGAGEVIFD-------VQGNPVQM 197 Query: 119 LALVRDASVEMAQKEQTRQLIIAV----DHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS 174 ++D + + + + + ++ LDP IV N GY S Sbjct: 198 HGTIQDITERKRDENRKNEYAHLIYDLYNNAPCGYHSLDPRGVIVDINETALRWLGYSRS 257 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 E G L + +L QL A E + + G + + + + Sbjct: 258 ELVGKVMFCDLLSEDCVQLCWDKLGQLKKGGALSNLELNIRCKDGRLFCVLLTSTALQSE 317 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGN---ILAAMCSSPPFHEMGEIICRNIESVLNESHV 291 + D TE R+ + + A+ + + I + + + Sbjct: 318 DGEFRGSRCILVDYTERRRHEKELQQAAVVFDAIREAVIITDDARNIVAVNNAFTDITGY 377 Query: 292 SLFALRNGMPIHWASSSHGAEIQNA--------QSWSATI--RQRDGAPAGILQ---IKT 338 +L + P S H + W I ++R+G Q + Sbjct: 378 TLDDVYGRNPRLQQSGRHDKTFYRSLWRSITEHGHWQGEIENKRRNGEIYPAWQNINVVY 437 Query: 339 SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV 398 + ++ +DIS ++ + + L D +TGLPNR N L++ + Sbjct: 438 DKNGNVANYVSVFSDISVI--------KEKEKQLRHLANHDSLTGLPNRLLFFNSLENSL 489 Query: 399 DKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQ 454 ++A + I +D + + D++G+ D L V R E ++ + + R+ G + Sbjct: 490 ERARRRRMEVALMFIDLDRFKIINDTMGHEAGDILLKTVARRLLEAVRGEDMVARLGGDE 549 Query: 455 FVL-VSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLST 511 F + + ++ + A +L + +P+ I + SIGI+ N L Sbjct: 550 FTISLEELSNTEDAAAKAGKLIETIRQPVHIGGHEIVCSASIGIAIFPHDADNAQNLARA 609 Query: 512 AHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGE 571 A AM ++ N ++F++ + E E L L + +++A+ N+ +L YQPQ +G Sbjct: 610 ADAAMYRAKELHRNTFEFYTSELTERAIEHLTLSSEMRQALERNEFELYYQPQFNLTSGR 669 Query: 572 LYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPA 631 L G E L RW P G + P FI +AE+ I+ IG WVI + CR +A W + +P Sbjct: 670 LVGAETLLRWRHPTRGLITPYCFINIAEDSALIDPIGGWVINQLCRDVAGWLKGGLKLPR 729 Query: 632 LSVNLSALHFRSNQLPNQVSDAMHAWGIDGH--QLTVEITESMMMEHDTEIFKRIQILRD 689 ++ N+S+ + ++ A+ WG++ L +E+TE + +H+ + ++ +R Sbjct: 730 IAFNVSSKQLEHYDVKGRIEHALQRWGLEPSDLDLELEVTEGAL-QHEERSVEVLRQVRL 788 Query: 690 MGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNL 749 +G+ +++DDFGTG+S LSRL +P+ +KID+ F+ + AL I +G++L L Sbjct: 789 LGLSVAIDDFGTGYSSLSRLKHMPIDTLKIDRMFIRDLPDDPNNQALASGIILLGRALGL 848 Query: 750 TVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 VVAEGVE EQ L++ +C QG+ S+PLP + Sbjct: 849 KVVAEGVENVEQLRFLQERNCDEAQGFLLSKPLPKAAFEKMLK 891 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 39/289 (13%), Positives = 87/289 (30%), Gaps = 24/289 (8%) Query: 107 LSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFT 166 ++ V G V L + + A +E L A V D +R+ V + Sbjct: 62 IACVVLIGGVVAWVLTANEARNKALRESRNNLDKAQQIARLGNWVWDLKRNEVYWSDQVY 121 Query: 167 EMFGYCISEASGMQPDTLLNI-PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIK 225 G + + L + P+ A + + L E ++ GE+ + Sbjct: 122 RNLGLSLHDNKASYEKFLECVHPDDRARIVKLVDEALENKQVYGIEHRVIWPDGEERIVC 181 Query: 226 ASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAM------------------CS 267 + ++DV + + T DITE ++ + + Sbjct: 182 GAGEVIFDVQGNPVQMHGTIQDITERKRDENRKNEYAHLIYDLYNNAPCGYHSLDPRGVI 241 Query: 268 SPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRD 327 + + ++ + + + + W + + IR +D Sbjct: 242 VDINETALRWLGYSRSELVGKVMFCDLLSEDCVQLCWDKLGQLKKGGALSNLELNIRCKD 301 Query: 328 GAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLI 376 G +L T+ +E F S+ + E+ + + ++Q Sbjct: 302 GRLFCVLLTSTALQSEDGEFRG-----SRCILVDYTERRRHEKELQQAA 345 >UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacteria RepID=A2SDI4_METPP Length = 1006 Score = 733 bits (1892), Expect = 0.0, Method: Composition-based stats. Identities = 189/708 (26%), Positives = 317/708 (44%), Gaps = 44/708 (6%) Query: 120 ALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 A+ R+ +++ Q + + +D ER +V N A+ GY SE G Sbjct: 300 AMERNRQHVHEIEDREAQFRTLYERTPVMMHSVDVERRLVAVNDAWLARLGYERSEVLGR 359 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 + L R + + + + ++ ++TR+GE + ++ S D Sbjct: 360 RSTEFLTAESRERAERSIIPRFMREGELRDMDYQMVTRSGEVLDVQISAIWETDAHGQPL 419 Query: 240 NLVMTFSDITEERQI--------RQLEGNILAAMCSSPPFHEMGEIICRNI--ESVLN-- 287 + D+TE++++ ++E + + E G I N E ++ Sbjct: 420 RTLAVLKDVTEQKRLALELAAEKERIEVTLHSIGDGVISTDEAGRITYLNPVAEQMVGCL 479 Query: 288 ---------ESHVSLFALRNGMPIHWASSSHGAEIQNAQ-SWSATIRQRDGAPAGI---- 333 V LF +G P+ + + SA +R R G G+ Sbjct: 480 LAQARGLPFAQVVQLFDQESGAPLPSPVEQCLQDREVYGVRESAALRHRSGRDYGVQISA 539 Query: 334 LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNY 393 I G A + D++ E Q + L D +TGLPNR + Sbjct: 540 APIAGRDGRVLGA-VMVFQDVT--------EARGLAQKMSYLAHHDGLTGLPNRVLFQDR 590 Query: 394 LDDLVD----KAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCR 449 + V + +DH + V DSLG+A D+ L V R L+ +CR Sbjct: 591 VHQACQSGRRHGRRFAVIFMDLDHFKHVNDSLGHAVGDELLKAVAQRLTGALRASDTICR 650 Query: 450 IEGTQFVLVSLEND---VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKN 504 + G +FV++ + D V + ++A ++ V++P ++ + S+GI+ G++ Sbjct: 651 LGGDEFVVLLSDLDDVEVDGVAEVAKKILRQVAQPCVLGGTEVNVGASLGIALFPGDGED 710 Query: 505 RDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQ 564 D L+ A AM ++ G N + FFS A+++ RL L A ++ A++ Q + YQP Sbjct: 711 PDTLMKRADAAMYRSKREGRNRYHFFSKAVDDAASARLQLEADMRRALAAGQFIVHYQPV 770 Query: 565 IFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRS 624 + T + +EAL RW G P+ FIP+AEE G I +G WV+ +AC QL W Sbjct: 771 VHGRTRDAVAVEALLRWDRAGQGLQSPAVFIPVAEESGLIVPMGHWVLRQACEQLRAWSG 830 Query: 625 QNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRI 684 + +++VN+S + + V+D +HA G+DG +L EITES +M+ + + Sbjct: 831 TALGGISVAVNVSPVQLAQADFVDTVADVLHATGVDGSRLEFEITESTLMQDPEATLEML 890 Query: 685 QILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIG 744 + L+ +GV +++DDFGTG+S L L PV +KID +FV + L+ AI ++ Sbjct: 891 RRLKGLGVRIAIDDFGTGYSSLGHLKRFPVDTLKIDHTFVRDLEADADDRELVRAILAMA 950 Query: 745 QSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 +SL L VVAEGVET+ Q +L + C QGY F+RP A W+ Sbjct: 951 RSLRLHVVAEGVETEAQAAILAAMECPAFQGYLFARPAGAAVTAAWLQ 998 Score = 101 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 49/291 (16%), Positives = 108/291 (37%), Gaps = 20/291 (6%) Query: 10 ADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIG-NNIDMLIPRDLRPA 68 + F E+ + ++ ++ N A GY+R EV+G + + L A Sbjct: 314 REAQFRTLYERTPVMMHSVDVERRLVAVNDAWLARLGYERSEVLGRRSTEFLTAESRERA 373 Query: 69 HPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFA-LSKVSAEGKVYY-LALVRDAS 126 I G+ R + Q+ + G + + + + + A G+ LA+++D + Sbjct: 374 ERSIIPRFMREGELR----DMDYQMVTRSGEVLDVQISAIWETDAHGQPLRTLAVLKDVT 429 Query: 127 VEM----AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPD 182 + + ++ + + + VI D I N +M G +++A G+ Sbjct: 430 EQKRLALELAAEKERIEVTLHSIGDGVISTDEAGRITYLNPVAEQMVGCLLAQARGLPFA 489 Query: 183 TLLNI--PEFPADNRIRLQQLLWKTA--RDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 ++ + E A ++Q L ++ L R+G ++ S +P+ + Sbjct: 490 QVVQLFDQESGAPLPSPVEQCLQDREVYGVRESAALRHRSGRDYGVQISAAPIAGRDGRV 549 Query: 239 QNLVMTFSDITE-----ERQIRQLEGNILAAMCSSPPFHEMGEIICRNIES 284 VM F D+TE ++ + L + + F + C++ Sbjct: 550 LGAVMVFQDVTEARGLAQKMSYLAHHDGLTGLPNRVLFQDRVHQACQSGRR 600 >UniRef50_A0YYE8 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YYE8_9CYAN Length = 990 Score = 732 bits (1890), Expect = 0.0, Method: Composition-based stats. Identities = 169/683 (24%), Positives = 297/683 (43%), Gaps = 26/683 (3%) Query: 127 VEMAQKEQTRQLIIAVDHLDRPVIVLDP---ERHIVQCNRAFTEMFGYCISEASGMQPDT 183 +E L A++ + +I+ DP + I+ N A GY SE G Sbjct: 314 ERHRSEEYLHLLERAINSANNGIIITDPHQPDNPIIYFNTAVEHSTGYPASEIMGKNC-R 372 Query: 184 LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVM 243 L + ++ + + G W + ISPV++ L N + Sbjct: 373 FLQGKDRNQPEINIIRAAISAKKECNVVLRNYRKDGSLFWNELFISPVFNNKGKLTNFIG 432 Query: 244 TFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIH 303 DI+E ++ + +I NI ++ +++ L + Sbjct: 433 IQKDISERKRSEANLKKSQERL-KKIVSAISDALIVININGLIKFVNLAAEVLFDRSESF 491 Query: 304 WASSSHGAEIQNAQSWSATIRQRDGAPA--GILQIKTSSGAETSAFIERVADISQHMAAL 361 G + TI Q G I ++ E + + + DI+ Sbjct: 492 LIGYPIGNFLLEEDKIELTIVQPKGKLVFVEIRSVEIDWEGEKATLVS-LRDIT------ 544 Query: 362 ALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV-----SPVVYLIGVDHIQD 416 E++++ + + +D +T LPNR + L+ + + S V + +D + Sbjct: 545 --ERKQAEEQLRHSAFYDALTNLPNRALFMDQLEQAITQTKTLNQTSFAVVFLDLDSFKF 602 Query: 417 VIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFV-LVSLENDVSNITQIADELR 475 V +SLG+ DQ L+ + +R L+ L R+ G +F L+ VS + ++ Sbjct: 603 VNESLGHIIGDQLLIAIADRLETCLRSGDILARLGGDEFTFLLKDIEQVSQAITVVQNIQ 662 Query: 476 NVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPA 533 + ++ P + S+GI+ + +L A AM ++ G N + F+ Sbjct: 663 HKLTFPFDLSSHQLFSNASLGIALISPDYTYPEEVLRDADIAMYSAKQRGKNCYAIFNSQ 722 Query: 534 MNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSR 593 M + + RL L L+ A + YQP + +T ++ G EAL RW G + P + Sbjct: 723 MRKKSQHRLQLETDLRYAWEQQDFLVYYQPIVCLQTHQIVGFEALIRWQHLTKGLISPYQ 782 Query: 594 FIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN--IHIPALSVNLSALHFRSNQLPNQVS 651 FIP+AEE G I +G WV+ AC QL W N + +SVNLS+ + +++ Sbjct: 783 FIPVAEETGLIIELGSWVLKTACHQLKAWTRTNPRMQHLKMSVNLSSRQIQDYNFVKKIN 842 Query: 652 DAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVS 711 M I+ L +EITES++ME+ ++ +++ +R + LS+DDFGTG+S LS L + Sbjct: 843 QVMTETQINPQNLKLEITESILMENPEDVKEKLIQIRSQNIQLSLDDFGTGYSSLSYLHN 902 Query: 712 LPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCR 771 P+ +KID+SF+ R A+++AI ++ +L + V+AEG+ET E + L+ + C Sbjct: 903 FPINTLKIDRSFIVRMNLNPENTAIVQAIITLAHTLGMDVIAEGIETVEHLKHLQALECE 962 Query: 772 VIQGYFFSRPLPAEEIPGWMSSV 794 QGY FS+P+ A E + S Sbjct: 963 YGQGYLFSKPVSAIEADKLLESQ 985 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 91/257 (35%), Gaps = 34/257 (13%) Query: 13 IFFPALEQNMMGAVLINE---NDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAH 69 + A+ G ++ + ++ +++FN A E GY E++G N L +D Sbjct: 324 LLERAINSANNGIIITDPHQPDNPIIYFNTAVEHSTGYPASEIMGKNCRFLQGKDRNQPE 383 Query: 70 PEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVY--YLALVRDASV 127 IR K + L+ +KDGS W +S V ++ + +D S Sbjct: 384 INIIRAAISAKKEC----NVVLRNYRKDGSLFWNELFISPVFNNKGKLTNFIGIQKDISE 439 Query: 128 EMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDT 183 + + +L V + +IV++ I N A +F S G Sbjct: 440 RKRSEANLKKSQERLKKIVSAISDALIVININGLIKFVNLAAEVLFDRSESFLIGYPIGN 499 Query: 184 LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVM 243 L D+ E ++ G+ ++++ + D + ++ Sbjct: 500 FL-------------------LEEDKIELTIVQPKGKLVFVEIRSVEI-DWEGE-KATLV 538 Query: 244 TFSDITEERQIRQLEGN 260 + DITE +Q + + Sbjct: 539 SLRDITERKQAEEQLRH 555 Score = 58.5 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 76/257 (29%), Gaps = 63/257 (24%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP 67 + + ++IN N + F N AAE L+ +IG I + + + Sbjct: 448 KKSQERLKKIVSAISDALIVININGLIKFVNLAAEVLFDRSESFLIGYPIGNFLLEEDK- 506 Query: 68 AHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASV 127 EL + + G ++ ++ EG+ L +RD + Sbjct: 507 ---------------------IELTIVQPKGKLVFVEIRSVEIDWEGEKATLVSLRDITE 545 Query: 128 EMAQKEQTRQLIIA-------------------------VDHLDRPVIVLDPERHIVQCN 162 +EQ R ++ V+ LD + N Sbjct: 546 RKQAEEQLRHSAFYDALTNLPNRALFMDQLEQAITQTKTLNQTSFAVVFLDLDS-FKFVN 604 Query: 163 RAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKI 222 + + G D LL + +R +L + D+ FLL Sbjct: 605 ESLGHIIG-----------DQLLIAIADRLETCLRSGDILARLGGDEFTFLLKDIEQ--- 650 Query: 223 WIKASISPVYDVLAHLQ 239 + +I+ V ++ L Sbjct: 651 -VSQAITVVQNIQHKLT 666 Score = 53.5 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 8/135 (5%) Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 + E + E L + V + D + + N AF + GY + Sbjct: 21 ITKEKSIDEIQNSLFML---SPDLVGITDFNGYFKEVNPAFESILGYTAGQLLAQPWIEY 77 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 ++ + A + +QLL + E + ++ + + D+ +L Sbjct: 78 VHPDDQNATLQA-FEQLLNQEPIINFENRFRCQDNSYKYLSWT--AIADLENNLVY--AV 132 Query: 245 FSDITEERQIRQLEG 259 DIT ++ Sbjct: 133 ARDITMQKHTETQLR 147 Score = 51.6 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 65/499 (13%), Positives = 147/499 (29%), Gaps = 119/499 (23%) Query: 21 NMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGG 80 + + + N NPA E + GY +++ + D + A + Sbjct: 38 SPDLVGITDFNGYFKEVNPAFESILGYTAGQLLAQPWIEYVHPDDQNATLQAFEQLL--- 94 Query: 81 KARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTR---Q 137 + ++ E + +D S + + + ++ A+ RD +++ + Q R + Sbjct: 95 -NQEPIINFENRFRCQDNSYKY--LSWTAIADLENNLVYAVARDITMQKHTETQLRWRVR 151 Query: 138 LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIR 197 AV L + + + + +E ++ +L + + + Sbjct: 152 QQAAVAQLGQLALEKTIDVDKTNFLEQLFQQSVKMTAEILDVEYSKILQLL-PDNHHFLI 210 Query: 198 LQQLLWKTARDQDEFLLLTRTGEKIWIKAS-----------------------------I 228 + L W+ + + + I Sbjct: 211 IAGLGWEAGLIETTTVEKGENTHVGYTLLQNEPVVVENLQAETRFNGSSLLHEHEIISGI 270 Query: 229 SPVYDVLAHLQNLVMTFSD-----ITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIE 283 S V + ++ S T++ Q NILA E ++ R I Sbjct: 271 SVVIGSRKNPFGVLAVHSKKQRQFSTDDINFLQAIANILAMAVERHRSEEYLHLLERAIN 330 Query: 284 SVLNESHVSLFALRNGMPIHWASSSHG-------------------------------AE 312 S N ++ + I++ ++ A Sbjct: 331 SANNGIIITDPHQPDNPIIYFNTAVEHSTGYPASEIMGKNCRFLQGKDRNQPEINIIRAA 390 Query: 313 IQNAQSWSATIR--QRDGAPAG----ILQIKTSSGAETSAFIERVADISQHMAALALEQE 366 I + + +R ++DG+ I + + G + FI DIS E++ Sbjct: 391 ISAKKECNVVLRNYRKDGSLFWNELFISPVFNNKGK-LTNFIGIQKDIS--------ERK 441 Query: 367 KSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVDHI-QDVI------- 418 +S ++++ L +V A+S + +I ++ + + V Sbjct: 442 RSEANLKKS---------------QERLKKIVS-AISDALIVININGLIKFVNLAAEVLF 485 Query: 419 ---DSL--GYAWADQALLE 432 +S GY + L E Sbjct: 486 DRSESFLIGYPIGNFLLEE 504 >UniRef50_Q47AF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47AF7_DECAR Length = 1094 Score = 731 bits (1889), Expect = 0.0, Method: Composition-based stats. Identities = 202/860 (23%), Positives = 367/860 (42%), Gaps = 78/860 (9%) Query: 14 FFPALEQNMMGAVLINEND----EVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAH 69 + G +LI+ D V N A ++ G E IG L+ +L Sbjct: 238 YQEVFAHITDGLILIDVRDDASFRVAGANAAMAQIVGVPVESAIGKTFGELVEPELASQA 297 Query: 70 PEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVY-YLALVRDASV- 127 R + G + E + + + + + G+V+ + + RD + Sbjct: 298 EANYRRCVDLGDP----IHYESEFRRSGVVRHFDSMLVPMSDGAGRVFRVIGIHRDITER 353 Query: 128 ---EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 E+A + R+ V++ +I D + V N AF ++ G E G + Sbjct: 354 KQLEVALAAREREFRTLVENSPEVIIRYDRDLRRVFSNPAFDQLLGVLPGETRGKEVSCC 413 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFL-LLTRTGEKIWIKASISPVYDVLAHLQNLVM 243 D + Q ++ + R ++ L G + + + P + + +++++ Sbjct: 414 WAPRNISVDEFEAILQRVFASCRPEECLLEFRDERGSLVCLNYRLVPEFGLDGQVESVLG 473 Query: 244 TFSDITEERQIR---QLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALR--- 297 +++ ++ + + +IL + E+ E++ +E S+ L Sbjct: 474 FGHNVSALKRQEALGRAKVHILERLGQGAELSEVLELVTALLEQESPGYLCSIMLLDEAG 533 Query: 298 -------------------NGMPIHWASSSHGAEIQNAQ--------------------- 317 G+ I S G + + Sbjct: 534 ERLHIAAAASLPEKYCRAIEGVRIGDGIGSCGTAAWSGKEVFVENIATHPYWASYRDLPL 593 Query: 318 ------SWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQH 371 WS I G G+ I S + H+A +A+E+ + Sbjct: 594 KCGLRACWSFPIADSGGKVLGVFGIYRREPGLPSEAELESIRQAHHLAMVAIERNRIEAK 653 Query: 372 IEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWAD 427 ++ FD +TGLPNR+ + L D + +A + I +D ++V DSLG+ D Sbjct: 654 LKYQASFDALTGLPNRSLFYIRLRDEMLRAARTGHGGALLFIDLDRFKEVNDSLGHESGD 713 Query: 428 QALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDD 486 L+E R R +++ + R+ G +FV+V + ++ +A + + + P ++D Sbjct: 714 SLLVEAAERIRAQVRASDLVARLGGDEFVVVLPDVRAPEHLGLLAQAIVDALVVPFVLDG 773 Query: 487 KPFPLTLSIGIS--YDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVL 544 ++ S+GI+ ++ D LLS A AM ++ G NG+ FF+ +M RL L Sbjct: 774 HQAYVSASVGIACYPQDAEDADILLSCADKAMYVAKELGRNGFCFFTESMQTSADYRLKL 833 Query: 545 GAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEI 604 L+ A+++ QL L YQP + E+G + EAL RW P G VPP +FI LAEE G I Sbjct: 834 SHDLRSALADGQLLLHYQPIVEVESGRVVKAEALLRWRHPQRGMVPPDQFIHLAEETGLI 893 Query: 605 ENIGRWVIAEACRQLAEWRS---QNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDG 661 IG WV +A +W + +SVN+S F + D + + G+D Sbjct: 894 HAIGDWVFQQAALTARDWAARMPAGAADCQISVNMSPRQFVKDGSEAGWLDYLKSIGLDP 953 Query: 662 HQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDK 721 + +EITE ++++ + +R+ R G+ +S+DDFGTG+S ++ L P+ +KID+ Sbjct: 954 RYIGLEITEGLLLDERLHVAERLAAFRASGIQISLDDFGTGYSAMAYLKKYPIDYLKIDR 1013 Query: 722 SFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRP 781 +FV +++ A+ +A+ + L L VAEGVET EQ ++L+ C +IQGY+++RP Sbjct: 1014 TFVRDLVSDSGDRAIAQAMIFMASQLGLKTVAEGVETAEQRDLLQSFGCDLIQGYYYARP 1073 Query: 782 LPAEEIPGWM--SSVLPLKI 799 LP +E ++ ++VL L + Sbjct: 1074 LPRDEFMAYLEQANVLSLPV 1093 Score = 61.2 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 72/226 (31%), Gaps = 16/226 (7%) Query: 95 KKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQT-RQLIIAVDHLDRPVIVLD 153 ++ +W A+ + + A++ D ++ H+ +I++D Sbjct: 197 RRGHRMLWNSIAVG---LDNERLQHAIMADKLAAEGALRAAAQEYQEVFAHITDGLILID 253 Query: 154 ----PERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQ 209 + N A ++ G + A G L+ PE + ++ + Sbjct: 254 VRDDASFRVAGANAAMAQIVGVPVESAIGKTFGELVE-PELASQAEANYRRCVDLGDPIH 312 Query: 210 DEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIR----QLEGNILAAM 265 E R+G + + P+ D + ++ DITE +Q+ E + Sbjct: 313 YE-SEFRRSGVVRHFDSMLVPMSDGAGRVFRVIGIHRDITERKQLEVALAAREREFRTLV 371 Query: 266 CSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGA 311 +SP + R + N + L + G S A Sbjct: 372 ENSPEVIIRYDRDLRRV--FSNPAFDQLLGVLPGETRGKEVSCCWA 415 >UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCZ6_METSD Length = 869 Score = 731 bits (1887), Expect = 0.0, Method: Composition-based stats. Identities = 202/808 (25%), Positives = 346/808 (42%), Gaps = 57/808 (7%) Query: 20 QNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP---RDLRPAHPEYIRHN 76 +L + +++ N A +++GY R+++ + L+P D R +HN Sbjct: 83 HANDSILLFDHQGKLVDANDRALRMYGYTRDQMQHIHARQLLPDAASDWRSCFLAEAQHN 142 Query: 77 REGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTR 136 G+ E + + DGS + + G Y A+VRD + + E+ R Sbjct: 143 ---------GIIFESEHKHADGSTFSVEVSACLLKIGGSDYIQAIVRDITERLRVVEKLR 193 Query: 137 QLIIAVDH----LDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPA 192 + + H D E I R + G + + E Sbjct: 194 ESEQLLAHMSAIAHIGGWEFDVETGIGSWTREVAHIHGVEFKDNISAEFGLGFYEAESRE 253 Query: 193 DNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER 252 +QQ + E L+T G + W++ +P + + L +F DI++ + Sbjct: 254 KIEAAIQQAIDHGKPYDLELELVTARGIRKWVRTVCTPHI-IDGRVLKLQGSFQDISDRK 312 Query: 253 QIRQL--------EGNILAAMCSSPPFHEMG------EIICRNIESVLNESHVSLFALRN 298 E + A M + E+ + V+ ++ L + + Sbjct: 313 VAEDKMRLATLVFENSSEAIMVVDAESQILSVNPAFTEMTGYTAQEVVGKTPKILASGKQ 372 Query: 299 GMPIHWASSSHGAEIQNAQSWSATI--RQRDGA----PAGILQIKTSSGAETSAFIERVA 352 + + + W + R+++G I I G E + + Sbjct: 373 DRKFY---EEMWHLLDSNGKWQGEVWNRRKNGESYAEWLTIDTIYNEHG-EVIRRVALFS 428 Query: 353 DISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYL 408 DI+++ +++++ I + FD +TGLPNR LH+ L+ + KA V Sbjct: 429 DITKN--------KQNQEVIWRQANFDQLTGLPNRRMLHDRLNQEILKADRNHQMLAVLF 480 Query: 409 IGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNI 467 + +D ++V D+ G+ DQ L E +R ++ + R+ G +FV++ D + Sbjct: 481 LDLDRFKEVNDTYGHLMGDQLLQESAHRLLHSVRECDTVARLGGDEFVVILSGLQDKDVV 540 Query: 468 TQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGN 525 IA + P +D+ +++SIGI+ + G + L A AM + NG N Sbjct: 541 QDIAQSILKKFDTPFQLDNDLTHVSVSIGITIYPEDGNAGEVLFKNADQAMYVAKNNGRN 600 Query: 526 GWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPL 585 + +F+ +M + R+ L L A+ Q +L YQP + TG+++ EAL RW P Sbjct: 601 RYSYFTASMQAHAQNRMRLSNDLHLALPGQQFELYYQPIVELATGQVHKAEALLRWQHPT 660 Query: 586 HGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSN- 644 G +PP FIPLAEE G I +IG WV EA RQ+ +S + +S+N S + F + Sbjct: 661 RGMIPPDNFIPLAEETGLIVDIGNWVFYEAARQVKRLQSLHHASFQISINKSPVQFHNET 720 Query: 645 QLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFS 704 + + + VEITE ++M D I ++ RD GV +++DDFGTG+S Sbjct: 721 HGHEAWISFLLMNDLPRQSIVVEITEGLLMHTDESISAQLLGFRDAGVQVALDDFGTGYS 780 Query: 705 GLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEM 764 LS L + +KID+ FV +AL EAI + L++ V+AEG+ET+EQ E+ Sbjct: 781 SLSYLKKFDIDYLKIDRIFVRNLSRNSSDMALCEAIVMMAHKLDIKVIAEGIETEEQREL 840 Query: 765 LRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 L++I C QGY FS PLPA ++ Sbjct: 841 LQQIGCDFGQGYLFSPPLPAPAFEAYLR 868 Score = 65.5 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 66/213 (30%), Gaps = 36/213 (16%) Query: 3 LTDADNAADGIFFPAL--EQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 ++D A D + L E + ++++ +++ NPA ++ GY +EV+G +L Sbjct: 308 ISDRKVAEDKMRLATLVFENSSEAIMVVDAESQILSVNPAFTEMTGYTAQEVVGKTPKIL 367 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYY 118 E + H + E+ +K+G W + Sbjct: 368 ASGKQDRKFYEEMWHLLDSNGK----WQGEVWNRRKNGESYAEWLTIDTIYNEHGEVIRR 423 Query: 119 LALVRDASVEMAQKE------------------------QTRQLIIAVDHLDRPVIVLDP 154 +AL D + +E L +H V+ LD Sbjct: 424 VALFSDITKNKQNQEVIWRQANFDQLTGLPNRRMLHDRLNQEILKADRNHQMLAVLFLDL 483 Query: 155 ERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI 187 + + N + + G + LL+ Sbjct: 484 D-RFKEVNDTYGHLMG---DQLLQESAHRLLHS 512 >UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WZ79_METML Length = 1250 Score = 731 bits (1887), Expect = 0.0, Method: Composition-based stats. Identities = 208/814 (25%), Positives = 344/814 (42%), Gaps = 72/814 (8%) Query: 30 ENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSR 89 + V N A EKL G ++ +I +I++ I HP+ + KA E S Sbjct: 457 PDFRVNHVNAAIEKLCGLSQQALID-DIEVWI----NLIHPDDCAQAKLAMKAVFEQSSV 511 Query: 90 --ELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRDASVEM----AQKEQTRQLIIA 141 E ++ DG+ W + V E + ++ D + + A +E ++I Sbjct: 512 ALEYRIVLADGTVRWVSDSRHVVYGESGESAELVCVIHDVTAKRLAADADRESKERVIQM 571 Query: 142 VDHLDRPV-IVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQ 200 ++ V I ++ N+ +TE+ G P + L Q Sbjct: 572 LETSPIAVRIATSSGDKVLFANKRYTELINCPPDAVMGRNPKLYY---AHAEEYDALLAQ 628 Query: 201 LLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGN 260 + A + L+ +W AS PV+ ++ F D+T+ R+ + Sbjct: 629 VNSGHAINDKLIQLIVEGKGPVWAMASYRPVH--YEGTAAILGWFYDVTDLRRAQDALLL 686 Query: 261 ILAAMCSSP----------------PFHEMGEIICRNIESVLNESHVSLFALRNGMPIHW 304 A S ++ I + S S+ L Sbjct: 687 SEALAKQSLEELKYQKYALDKHAIVAVTDVKGRITYANDKFSEISGYSIEELLGQDHAIL 746 Query: 305 ASSSHGA--------EIQNAQSWSATI--RQRDGAPAGI---LQIKTSSGAETSAFIERV 351 S H + N Q W I R +DG+ + + + ++I Sbjct: 747 NSGYHPKGYFKEMYRTVANGQVWHDEICNRAKDGSLYWVDTTIAPFIGDDGKPQSYISIR 806 Query: 352 ADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVY 407 DI+Q ++ + L +DP+T LPNR L + L + A+ + Sbjct: 807 TDITQ--------RKAAEDKSNYLALYDPLTNLPNRRLLLDRLTHALASAMRTGRGGALL 858 Query: 408 LIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNI 467 + +DH + + D+LG+ D L +V ++ + R+ G +FV++ + Sbjct: 859 FLDLDHFKTLNDTLGHDVGDLLLQQVAECLTACVREGDTVARLGGDEFVVILEGLSEQEV 918 Query: 468 TQIA------DELRNVVSKPIMIDDKPFPLTLSIGISYDLGKN---RDYLLSTAHNAMDY 518 A +++ N +P + +T S+GI+ GKN D LL A AM Sbjct: 919 EAAAQAEVVGEKILNKFIEPYQFKGYEYHITSSVGITLF-GKNNLKSDELLKQADIAMYQ 977 Query: 519 IRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEAL 578 +K G N FF P M E ++ R+ + L++A+ N+ +L YQ Q+ G EAL Sbjct: 978 AKKLGRNALSFFDPKMQEGIQARVDMEHELRKALDKNEFQLFYQMQVGLSD-RAVGAEAL 1036 Query: 579 ARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEW-RSQNIHIPALSVNLS 637 RW P G +PP+ F+ +AE+ G I +IG WVI AC QL W +S+ LSVN+S Sbjct: 1037 IRWIHPERGLIPPNEFVSIAEDCGMILSIGAWVIDTACAQLKRWEQSERTRSLTLSVNVS 1096 Query: 638 ALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVD 697 A FR QV+ A+ GI+ L +E+TES +++H + + L+D+G+ S+D Sbjct: 1097 AKQFRQADFVEQVTTAIARHGINPMLLKLELTESALLDHIEDAVAIMNALKDIGIRFSLD 1156 Query: 698 DFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVE 757 DFGTG+S L L LP+ ++KID+SFV + A++ I ++ +LNL V+AEGVE Sbjct: 1157 DFGTGYSSLQYLRLLPLYQLKIDRSFVRDIASSIGNQAIVRTIIAMAHTLNLNVIAEGVE 1216 Query: 758 TKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 T+ Q +L C QGY FS P+P + + Sbjct: 1217 TQVQQGILLDSGCMHYQGYLFSEPVPIDAFEALL 1250 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 87/271 (32%), Gaps = 21/271 (7%) Query: 5 DADNAADGIFFPALEQNMMGA-VLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 DAD + LE + + + + D+V+F N +L + V+G N + Sbjct: 559 DADRESKERVIQMLETSPIAVRIATSSGDKVLFANKRYTELINCPPDAVMGRNPKLYYAH 618 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVR 123 + + G A + +L +E K +W + V EG L Sbjct: 619 ---AEEYDALLAQVNSGHA-INDKLIQLIVEGK--GPVWAMASYRPVHYEGTAAILGWFY 672 Query: 124 DASVEMAQKEQTRQLIIAVDHLDRP-------------VIVLDPERHIVQCNRAFTEMFG 170 D + ++ V V D + I N F+E+ G Sbjct: 673 DVTDLRRAQDALLLSEALAKQSLEELKYQKYALDKHAIVAVTDVKGRITYANDKFSEISG 732 Query: 171 YCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISP 230 Y I E G +LN P + + + DE + G W+ +I+P Sbjct: 733 YSIEELLGQD-HAILNSGYHPKGYFKEMYRTVANGQVWHDEICNRAKDGSLYWVDTTIAP 791 Query: 231 VYDVLAHLQNLVMTFSDITEERQIRQLEGNI 261 Q+ + +DIT+ + + Sbjct: 792 FIGDDGKPQSYISIRTDITQRKAAEDKSNYL 822 Score = 75.9 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 64/149 (42%), Gaps = 9/149 (6%) Query: 16 PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRH 75 AL+++ + AV + + + N ++ GY EE++G + +L HP+ Sbjct: 703 YALDKHAIVAV-TDVKGRITYANDKFSEISGYSIEELLGQDHAILNSG----YHPKGYFK 757 Query: 76 NREGGKARVEGMSRELQLEKKDGSKIWTRFALSK-VSAEGKVY-YLALVRDASVEMAQKE 133 A + E+ KDGS W ++ + +GK Y+++ D + A ++ Sbjct: 758 EMYRTVANGQVWHDEICNRAKDGSLYWVDTTIAPFIGDDGKPQSYISIRTDITQRKAAED 817 Query: 134 QTRQLIIA--VDHLDRPVIVLDPERHIVQ 160 ++ L + + +L ++LD H + Sbjct: 818 KSNYLALYDPLTNLPNRRLLLDRLTHALA 846 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 730 bits (1886), Expect = 0.0, Method: Composition-based stats. Identities = 153/477 (32%), Positives = 257/477 (53%), Gaps = 18/477 (3%) Query: 325 QRDGAPAGILQIKT---SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPM 381 ++ G +L K + +T + DI+ E+++S + I+ L D + Sbjct: 108 RQSGRIRWLLTSKFPVFNDTGKTIGLVGIGRDIT--------ERKQSEEQIQYLATHDSL 159 Query: 382 TGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRF 437 T LPNR L ++ A V I +D +++ D+LG+ DQ L+ + NRF Sbjct: 160 TALPNRFMFSKLLAVAIESARRHQRQLAVLFIDLDRFKNINDTLGHDAGDQLLITMANRF 219 Query: 438 REKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIG 496 R L+ + R+ G +FV++ E ++A ++ + +P+ + + +T SIG Sbjct: 220 RTCLRTSDIVGRLGGDEFVILLPELESHDQAARVAQKILSAAIQPLDVHGQECRVTASIG 279 Query: 497 ISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISN 554 I + ++ L+ A AM ++ G N +QF+SP + ERL+L L++A+ Sbjct: 280 ICLYPEDAEDEQALMKNADIAMYRAKEEGKNNYQFYSPDLKVRSLERLMLENNLRKALER 339 Query: 555 NQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAE 614 ++ L YQ + +TG++ G+EAL RW P G + P+ FIPLAEE G I ++GRWV+ Sbjct: 340 HEFFLHYQAKRNLKTGKIAGVEALVRWQHPELGTISPAHFIPLAEETGLIVHLGRWVLRA 399 Query: 615 ACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMM 674 AC Q W+ Q + ++VNLSA F + L N +++A+ G+ L +EITE M+M Sbjct: 400 ACTQGVIWQQQGLPPICIAVNLSARQFFDDNLINDIANALRESGLAPELLEMEITEGMIM 459 Query: 675 EHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRIL 734 + + + ++ +GV L++DDFG G+S L+ + P+ +K+D SF+ + Sbjct: 460 QDAERAIRILTGIKALGVRLAIDDFGVGYSSLAHIKRFPIDTLKVDSSFIRDIPANREDR 519 Query: 735 ALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 A+ EAI ++G++L+LTV+AEGVET+EQ LR C QGY+FS+P+ EE +M Sbjct: 520 AITEAIIAMGKTLSLTVIAEGVETQEQENFLRDSACDQTQGYYFSKPVSPEEFTRFM 576 Score = 63.9 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 55/155 (35%), Gaps = 7/155 (4%) Query: 137 QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRI 196 L D+ + D + N+ + G + + D N P+ + Sbjct: 27 LLAALADNSPDLIYAKDTRGRFIFLNKTLMAVMGAQDLQDVLGKTDFDFNTPDNAQNYYQ 86 Query: 197 RLQQLLWKTAR--DQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQI 254 Q ++ +++E ++ ++G W+ S PV++ LV DITE +Q Sbjct: 87 DDQTVIQSGQPLINREEPVVDRQSGRIRWLLTSKFPVFNDTGKTIGLVGIGRDITERKQS 146 Query: 255 RQL-----EGNILAAMCSSPPFHEMGEIICRNIES 284 + + L A+ + F ++ + + Sbjct: 147 EEQIQYLATHDSLTALPNRFMFSKLLAVAIESARR 181 Score = 46.2 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 45/134 (33%), Gaps = 6/134 (4%) Query: 11 DGIFFPAL-EQNMMGAVLINENDEVMFFNPAAEKLWGYKR-EEVIGNNIDMLIPRDLRPA 68 + AL + + + +F N + G + ++V+G D Sbjct: 24 EAFLLAALADNSPDLIYAKDTRGRFIFLNKTLMAVMGAQDLQDVLGKTDFDFNTPDNAQN 83 Query: 69 HPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYYLALVRDAS 126 + + + + G+ + E ++++ G W + V + + + RD + Sbjct: 84 YYQDDQTVIQSGQPLI--NREEPVVDRQSGRIRWLLTSKFPVFNDTGKTIGLVGIGRDIT 141 Query: 127 VEMAQKEQTRQLII 140 +EQ + L Sbjct: 142 ERKQSEEQIQYLAT 155 >UniRef50_Q21WZ6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=Q21WZ6_RHOFD Length = 1355 Score = 730 bits (1886), Expect = 0.0, Method: Composition-based stats. Identities = 194/700 (27%), Positives = 318/700 (45%), Gaps = 37/700 (5%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 +VR E A E ++ + D+ + +D + + + ++ G+ +E Sbjct: 383 IVRQRRAETALHESEQRHRLLADNASDVIWTMDLKGRFTYVSPSVEKLRGFTSAEVMQQT 442 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTAR-----DQDEFLLLTRTGEKIWIKASISPVYDVL 235 L P + + A + E + G +W + S + + + Sbjct: 443 LAQTLCPSSIPVATEALGKSMASMAAGLPFIGFRGELEQPCKDGSTVWTEISTNGMRNEQ 502 Query: 236 AHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNES 289 +V +ITE + +Q + + ++ R + + Sbjct: 503 GDFVGIVGVSRNITERKAQQQQLQLAAQVFAQGREGITVTDARGHIIMVNRAFSEITGYT 562 Query: 290 HVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDG----APAGILQIKT 338 + L++ + + W+ + R++DG I ++ Sbjct: 563 QAEVLGQNPRILKSERQSPEFYLDMWTALTTSGHWAGEMWNRKKDGTVYPEWMAISALRD 622 Query: 339 SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV 398 S G T+ ++ +D+S + + I+ L QFD +TGLPNR L + + Sbjct: 623 SQG-LTTHYVASFSDLSTA--------KAAESRIQWLSQFDTLTGLPNRTLLQDRTALAL 673 Query: 399 DKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQ 454 + L+ +DH V D+LG+ D+ L+E+ R + ++ + R+ G + Sbjct: 674 SMVQRAREPLTMLLVAIDHFGAVNDTLGHQLGDELLVEMARRLSDSVREQDTVSRMGGKE 733 Query: 455 FVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGIS--YDLGKNRDYLLSTA 512 FVLV +A EL +S+P + LT SIGI+ D G + D L Sbjct: 734 FVLVLPGTPAMGAAHLATELLWKLSRPCSLGMHELTLTASIGIASFPDNGADFDTLFKAV 793 Query: 513 HNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGEL 572 AM + G + +QF+S M E V L AL++AI +QL+LVYQPQ+ +TG++ Sbjct: 794 EIAMHRAQLKGRDTYQFYSDDMYEQVLAHDRLIKALRQAIVLDQLQLVYQPQVDLQTGQI 853 Query: 573 YGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPAL 632 G+EAL RW P G V P +FIPLAEE G I IG WV+ AC+ + W I +P + Sbjct: 854 CGVEALLRWQHPELGAVSPGQFIPLAEESGLIIGIGEWVLRRACQDIRRWLDHGIKVPHV 913 Query: 633 SVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGV 692 ++N S L FR N L QV A+ ID + +E+TES +M+ ++ L+D+G+ Sbjct: 914 AINASPLQFRDNNLVLQVKAALTESQIDPALIYIEVTESALMDDVPRNEAMLKALKDLGI 973 Query: 693 GLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVV 752 LS+DDFGTG+S LS L P ++KID+SFV T + L++ I S+ L + V+ Sbjct: 974 KLSLDDFGTGYSSLSYLKRFPFDQVKIDQSFVRDIATSQSDSLLVKVIVSMAHGLGMKVI 1033 Query: 753 AEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 AEGVET+ Q E++R C IQGYFF +P+ A+ I S Sbjct: 1034 AEGVETEAQCEIMRTSICDEIQGYFFCKPISAQAIEELFS 1073 Score = 158 bits (400), Expect = 8e-37, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 99/256 (38%), Gaps = 5/256 (1%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A + ++ + ++ + +P+ EKL G+ EV+ + + Sbjct: 392 ALHESEQRHRLLADNASDVIWTMDLKGRFTYVSPSVEKLRGFTSAEVMQQTLAQTLCPSS 451 Query: 66 RPAHPEYIRHNREGGKARVE--GMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLAL 121 P E + + A + G EL+ KDGS +WT + + + E V + + Sbjct: 452 IPVATEALGKSMASMAAGLPFIGFRGELEQPCKDGSTVWTEISTNGMRNEQGDFVGIVGV 511 Query: 122 VRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 R+ + AQ++Q + + V D HI+ NRAF+E+ GY +E G P Sbjct: 512 SRNITERKAQQQQLQLAAQVFAQGREGITVTDARGHIIMVNRAFSEITGYTQAEVLGQNP 571 Query: 182 DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNL 241 L + + P + + + L + E + G +IS + D + Sbjct: 572 RILKSERQSP-EFYLDMWTALTTSGHWAGEMWNRKKDGTVYPEWMAISALRDSQGLTTHY 630 Query: 242 VMTFSDITEERQIRQL 257 V +FSD++ + Sbjct: 631 VASFSDLSTAKAAESR 646 Score = 71.6 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 51/139 (36%), Gaps = 2/139 (1%) Query: 119 LALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 +A +R+ + + L +D + D + N T + G A G Sbjct: 86 VASMREQEAQAENHRSQQLLTALIDSSTDAIFAKDLAGRYLLFNHETTRVMGTTPERALG 145 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 DT L PE R Q++L E L T GE++++ A+ P+ D + Sbjct: 146 -HDDTALFPPEQAELIRANDQRVLALNRTTSYEETLETVDGERVFL-ATKGPLRDSNGQV 203 Query: 239 QNLVMTFSDITEERQIRQL 257 L DIT+ ++ Sbjct: 204 IGLFGISRDITDRKRDETR 222 Score = 60.4 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 49/140 (35%), Gaps = 5/140 (3%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 ++ + + ++ + + + FN ++ G E +G++ L P Sbjct: 98 NHRSQQLLTALIDSSTDAIFAKDLAGRYLLFNHETTRVMGTTPERALGHDDTALFP---- 153 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK-VYYLALVRDA 125 P E IR N + A S E LE DG +++ + G+ + + RD Sbjct: 154 PEQAELIRANDQRVLALNRTTSYEETLETVDGERVFLATKGPLRDSNGQVIGLFGISRDI 213 Query: 126 SVEMAQKEQTRQLIIAVDHL 145 + + + + L Sbjct: 214 TDRKRDETRLTLEARRAEAL 233 >UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLV2_DESVM Length = 896 Score = 730 bits (1886), Expect = 0.0, Method: Composition-based stats. Identities = 202/847 (23%), Positives = 328/847 (38%), Gaps = 78/847 (9%) Query: 12 GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPE 71 G+ L+ ++ L + + N L G ++V+G + + P + A + Sbjct: 49 GLLRALLDNPLVALFLRDGEGRYLAANHLYADLAGVPGKDVVGLSPRDIFPHAVASALLD 108 Query: 72 YIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALS-KVSAEGKVYYLALVRDASVEMA 130 R E + E L + +++ L G L L D + + Sbjct: 109 EDRRVAEDSTPLLC----ERMLPADEAERVFRVAKLPLPPEVAGPGAVLGLAFDVTALVE 164 Query: 131 QK-------------EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 + E T + + V V IV CNRA M G+ Sbjct: 165 AEIEEEVRQRTAALAESTARFRALFELAPDAVYVRGEGGRIVDCNRAAERMSGHPRETLL 224 Query: 178 GMQPDTLL---------------------NIPEFPADNRIRLQQLLWK-----TARDQDE 211 ++ LL + PA+ R T E Sbjct: 225 SLRTADLLPPDIEVRIDNLLTGCPLPVATHPDSTPAEPRQGTDGANPGSGFCPTGGFCME 284 Query: 212 FLLLTRTG-EKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEG---NILAAMCS 267 + G + + P+ + ++ DI+ R + + Sbjct: 285 GICTAAHGPHEAEVSVEPLPLSLLRGKGMTALVVVHDISGRRTAERQARLFERVFRNALE 344 Query: 268 SPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQN--------AQSW 319 + II + + P S H + W Sbjct: 345 GICITDPEGIIVAVNPAFTTITGYPADDAVGQSPRLLKSHHHDSAFYEDMWRALVEEGRW 404 Query: 320 SATI--RQRDGA----PAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIE 373 I R+R+G I I +G T ++ DI+ E + I+ Sbjct: 405 EDEIWNRRRNGEVYPEWLSISAIPGPTGR-TEYYVAVFHDIT--------ELKAKESQIQ 455 Query: 374 QLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQA 429 D +TGLPNR L + L ++ A V + +D+ + V DSLG+ D Sbjct: 456 HQAHHDALTGLPNRALLRDRLGMAINGARREDRKVAVLSVDLDNFKQVNDSLGHMVGDIY 515 Query: 430 LLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKP 488 L + + R+ ++P L R+ G +FV+V + + Q+A+ L + P+ + + Sbjct: 516 LQQAAEQMRQMVRPQDTLARVGGDEFVVVLQDVEGERDAAQVAERLLARFTDPVRVQEHE 575 Query: 489 FPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGA 546 + S+GI+ D G + D L+ A AM ++ G + F+PAMN+ RL L Sbjct: 576 LFVGASVGIALFPDDGDDPDTLVRNADIAMSRAKEQGKRRYHLFTPAMNDRAVRRLSLEG 635 Query: 547 ALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIEN 606 L A++ + YQP++ TG + G+EALARW P+ FIPLAE G I Sbjct: 636 DLHRALAAGDITAHYQPRVDLNTGLITGMEALARWIRADGSQEHPAEFIPLAESTGLIVP 695 Query: 607 IGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTV 666 +G ++ AC + ++VNLS FR L V+D + G+ H L + Sbjct: 696 LGEHMLRLACAKTRALCDAGHADLHVAVNLSVHQFRHRNLVGMVADVLAETGLPPHLLEL 755 Query: 667 EITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDR 726 EITES ++ +++ L +MG+ LSVDDFGTG+S L +L +LP+T +KID+SF+ Sbjct: 756 EITESTIVTDVDHTIRKLNQLAEMGIALSVDDFGTGYSSLYQLKNLPLTSLKIDRSFIRD 815 Query: 727 CLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEE 786 + A+ I ++ L L VVAEGVET EQ L C +QG+ FSRPLP +E Sbjct: 816 IPDDPNDAAIAATIITMADRLGLRVVAEGVETPEQLNFLLLEGCHEVQGFLFSRPLPPDE 875 Query: 787 IPGWMSS 793 ++ Sbjct: 876 FTALLAR 882 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 63/284 (22%), Positives = 96/284 (33%), Gaps = 29/284 (10%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVI---------- 53 T A + F E + E ++ N AAE++ G+ RE ++ Sbjct: 175 TAALAESTARFRALFELAPDAVYVRGEGGRIVDCNRAAERMSGHPRETLLSLRTADLLPP 234 Query: 54 -----------GNNIDMLIPRDLRPAHPE--YIRHNREGGKARVEGMSRELQLEKKDG-- 98 G + + D PA P N G G E G Sbjct: 235 DIEVRIDNLLTGCPLPVATHPDSTPAEPRQGTDGANPGSGFCPTGGFCMEGICTAAHGPH 294 Query: 99 -SKIWTR-FALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPER 156 +++ LS + +G + L +V D S + Q R + + + DPE Sbjct: 295 EAEVSVEPLPLSLLRGKG-MTALVVVHDISGRRTAERQARLFERVFRNALEGICITDPEG 353 Query: 157 HIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLT 216 IV N AFT + GY +A G P LL + + + L + R +DE Sbjct: 354 IIVAVNPAFTTITGYPADDAVGQSP-RLLKSHHHDSAFYEDMWRALVEEGRWEDEIWNRR 412 Query: 217 RTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGN 260 R GE SIS + + V F DITE + + Sbjct: 413 RNGEVYPEWLSISAIPGPTGRTEYYVAVFHDITELKAKESQIQH 456 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 730 bits (1885), Expect = 0.0, Method: Composition-based stats. Identities = 198/706 (28%), Positives = 317/706 (44%), Gaps = 53/706 (7%) Query: 102 WTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQ- 160 W ++ V+ + ++ + + TRQL V+ L+ V + + Sbjct: 91 WADASMKAVTGVASLVTAIMLWRLMPQALRIPSTRQLEETVERLEHEVEERELAERSLAA 150 Query: 161 CNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGE 220 N + +E + + + + D R +Q L+ + L G Sbjct: 151 FNDTLETLVQQRTAEL-----EEINRLLKLEIDLRREAEQTLYAEKQRAVVTLQSIGDGV 205 Query: 221 KIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICR 280 D + + L +T +L +E + Sbjct: 206 IT---------TDKQSRVNYLNPVAERMTGWSNAEAQGKPLLEVF---RIVNESSRKLVP 253 Query: 281 NIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSS 340 N V+ H ++ L N + HG E S +A IR +DG G+ Sbjct: 254 NPVDVV-LQHGEIYGLANHTALI---GRHGNEYAIEDS-AAPIRDQDGNVLGV------- 301 Query: 341 GAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDK 400 + D+S E + L + D +TGLPNR L++ L+ + Sbjct: 302 -------VLVFHDVS--------EARNMANKMTYLAEHDYLTGLPNRLLLNDRLNQALTI 346 Query: 401 AVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFV 456 A + + +DH +++ DSLG+ DQ L V R L+ + R G +F+ Sbjct: 347 ARRDQEFIALMFLDLDHFKNINDSLGHEVGDQLLKMVARRLESCLRASDTISRQGGDEFM 406 Query: 457 LVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAH 513 ++ E + + ++A++L + P I ++ SIGI+ D G+N + L A Sbjct: 407 ILLPELTNYFSPAEVAEKLLAAATVPYEIGSHEITVSASIGIAVFPDDGENGELLTKNAD 466 Query: 514 NAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELY 573 AM + + G N +QFF+ AMNE V E L + L+ A+ N+ L YQP+I TG++ Sbjct: 467 AAMYHAKSLGRNNYQFFTRAMNERVMEIAELESKLRRAVERNEFVLYYQPKIDIRTGQVV 526 Query: 574 GIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALS 633 G EAL RW P G V P RFIP+AE+ G I IG WV+ EACRQ EW++ + ++ Sbjct: 527 GAEALIRWQHPSWGLVAPDRFIPIAEDSGLIRPIGLWVMREACRQNQEWQAAGLARIPVA 586 Query: 634 VNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVG 693 VNLS + R + +VS+ + G++ L +E+TES+ + +TE+ + LR MGV Sbjct: 587 VNLSTVQLRQHNFLQEVSEILLMSGLEPDYLELEVTESVAIHAETEVINWLHKLRSMGVK 646 Query: 694 LSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVA 753 L++DDFGTG+S LS L LP+ +KIDKSF+ T+ ++ AI + L L V+A Sbjct: 647 LALDDFGTGYSSLSYLKRLPINNVKIDKSFIRDIETDPDDATIITAIIRMSHGLRLNVIA 706 Query: 754 EGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI 799 EGVE Q E L+K C +QG+ SRP+PA+E + + P I Sbjct: 707 EGVENINQLEFLKKEGCDQMQGFIASRPVPADEFALLLQN-WPTPI 751 Score = 50.4 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 21/163 (12%), Positives = 57/163 (34%), Gaps = 14/163 (8%) Query: 5 DADNAADGIFFP-------ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNI 57 D A+ + L+ G + ++ V + NP AE++ G+ E G + Sbjct: 178 DLRREAEQTLYAEKQRAVVTLQSIGDGVITTDKQSRVNYLNPVAERMTGWSNAEAQGKPL 237 Query: 58 DMLIPRDLRPAHPEYIRHNRE--GGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK 115 + R + + + + + + + G++ L + G++ + + + + Sbjct: 238 LEVF-RIVNESSRKLVPNPVDVVLQHGEIYGLANHTALIGRHGNEYAIEDSAAPIRDQDG 296 Query: 116 --VYYLALVRDASVEMAQKEQTRQLII--AVDHLDRPVIVLDP 154 + + + D S + L + L +++ D Sbjct: 297 NVLGVVLVFHDVSEARNMANKMTYLAEHDYLTGLPNRLLLNDR 339 >UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=C6XEG9_METSD Length = 718 Score = 730 bits (1885), Expect = 0.0, Method: Composition-based stats. Identities = 185/695 (26%), Positives = 322/695 (46%), Gaps = 42/695 (6%) Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS--GMQPDTLLN 186 ++ L+ ++ + +V D ++ + ++ GY E G L Sbjct: 27 QHREHILDSLLKNMEGMAYCCLV-DAHWTMLFISDGCFDLTGYRPDELLHNGCTSFEELT 85 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 +PE A R + L + R + E+ ++T G+ W+ + +++ ++ L Sbjct: 86 LPEDRARIRNTVDDALSRRERFEIEYRIMTIDGQIRWVNERGTGIFNPQGQVEALEGFIQ 145 Query: 247 DITEER----QIRQLEGNILAAMCSSP----PFHEMGEIICRNI---ESVLNESHVSLFA 295 DIT+ + +++ E +S + G+ I N ES L Sbjct: 146 DITQRKLNEQALQEAERRYRNIFENSIEGIFQTSQDGQYINANPALARIYGYESPEELIQ 205 Query: 296 LRNGMPIHWASSSHGAEIQNAQS--------WSATIRQRDGAPAGIL----QIKTSSGAE 343 N + + + + I +RDG+ I ++ +G Sbjct: 206 SLNNIAQQLYVQPESRQAFLTLMQLEDRVVNFESQIYRRDGSTIWISENARAVRNDAGKL 265 Query: 344 TSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV----D 399 F V DI+ E++ IE D +TGLPNR + + L + Sbjct: 266 L-YFEGTVEDIT--------ERKSYNALIEYQATHDDLTGLPNRTLMQDRLLQAISYADR 316 Query: 400 KAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVS 459 A V + +D +D+ DS+G+ DQ L+ + R ++ + R G +FVL+ Sbjct: 317 TASKLAVVFVDLDKFKDINDSMGHFIGDQLLIAMARRLESCIRDSDTVARPGGDEFVLLL 376 Query: 460 LENDVSNI-TQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAM 516 + +Q + + S+P I+ K F +T SIGIS D GK + LL A AM Sbjct: 377 SNIHGMDALSQTLQRVLALTSEPCSIEGKDFTVTSSIGISLYPDDGKTSETLLKNADTAM 436 Query: 517 DYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIE 576 ++ G N +QF++ +N ++ ERL + ++ A+ +N+ L YQP++ T + G+E Sbjct: 437 YKAKQEGKNNFQFYTRELNSILVERLEMEYQMRNALGHNEFHLHYQPKLNLRTQRITGVE 496 Query: 577 ALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNL 636 AL RWH+P G + P+RFIP+AEE IE IG WV+ +AC + + + +SVN+ Sbjct: 497 ALIRWHNPRQGLISPNRFIPIAEESSLIEQIGSWVLEKACMESIALSQLSGYDVPVSVNV 556 Query: 637 SALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSV 696 S F+ + L +S + G+ L +EITE + + + K + L+ +G+ L++ Sbjct: 557 SPRQFQQSNLVGNISRVLQETGLKPSLLELEITEGTLADTSPQFIKVLNDLKGLGIKLAI 616 Query: 697 DDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGV 756 DDFGTG+S L L P+ +KID+SFV ++ A+L+AI ++G +L + +VAEGV Sbjct: 617 DDFGTGYSSLGYLKHFPIDNLKIDRSFVMGLESDTANQAILKAIVALGHNLGINLVAEGV 676 Query: 757 ETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 ET+ Q + L I C +QG+ FS+PLP ++ + Sbjct: 677 ETERQRDFLLSIGCDEMQGFLFSQPLPFDQAGKLL 711 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 91/250 (36%), Gaps = 11/250 (4%) Query: 13 IFFPALEQNMMGAV---LINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAH 69 +L +NM G L++ + ++F + L GY+ +E++ +N P Sbjct: 31 HILDSLLKNMEGMAYCCLVDAHWTMLFISDGCFDLTGYRPDELL-HNGCTSFEELTLPED 89 Query: 70 PEYIRHNREGGKARVEGMSRELQLEKKDGSKIWT-RFALSKVSAEGKVYYL-ALVRDASV 127 IR+ + +R E E ++ DG W + +G+V L ++D + Sbjct: 90 RARIRNTVDDALSRRERFEIEYRIMTIDGQIRWVNERGTGIFNPQGQVEALEGFIQDITQ 149 Query: 128 ----EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDT 183 E A +E R+ ++ + + + N A ++GY E + Sbjct: 150 RKLNEQALQEAERRYRNIFENSIEGIFQTSQDGQYINANPALARIYGYESPEELIQSLNN 209 Query: 184 LLNIPEFPADNRIRLQQLLW-KTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 + ++R L+ + E + R G IWI + V + L Sbjct: 210 IAQQLYVQPESRQAFLTLMQLEDRVVNFESQIYRRDGSTIWISENARAVRNDAGKLLYFE 269 Query: 243 MTFSDITEER 252 T DITE + Sbjct: 270 GTVEDITERK 279 Score = 58.9 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 6/127 (4%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGY-KREEVIGNNIDMLIPRD 64 A A+ + E ++ G +++ + + NPA +++GY EE+I +++ + + Sbjct: 156 ALQEAERRYRNIFENSIEGIFQTSQDGQYINANPALARIYGYESPEELI-QSLNNIAQQL 214 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWT--RFALSKVSAEGKVYYLALV 122 + RV E Q+ ++DGS IW + A +Y+ V Sbjct: 215 YVQPESRQAFLTLMQLEDRVVNF--ESQIYRRDGSTIWISENARAVRNDAGKLLYFEGTV 272 Query: 123 RDASVEM 129 D + Sbjct: 273 EDITERK 279 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 729 bits (1884), Expect = 0.0, Method: Composition-based stats. Identities = 194/863 (22%), Positives = 349/863 (40%), Gaps = 90/863 (10%) Query: 12 GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPE 71 + ++ + L + + N + L G D + P + Sbjct: 124 NLLRKLIDASPDYICLKDGAGRWLHANTSGLSLLHLNGVNTQGKT-DRELADLTHPNLRD 182 Query: 72 YIRHNREGGKARVEG---MSRELQLEKKDGSKIWTRFALSKVSAEG-KVYYLALVRDASV 127 +++H + + E + E + G ++ + +G + + L RD + Sbjct: 183 FMQHWQAADEYVWETGQLLREEETVPLPGGDRVLDVIKVPLFHDDGSRHGIVTLGRDITD 242 Query: 128 EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS--EASGMQPDTLL 185 + Q RQ +D L +L + E+ G A+ ++ + + Sbjct: 243 RKQVESQLRQRSAILDALISCDWLLHSSESWQKVAVGVLELLGLASHASRAALLKNSSDI 302 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKA--SISPVYD---------- 233 ++ +K D + R G W+ SP++ Sbjct: 303 EAEAPISELLHHWNAPGFKPLSDGYHCIDYLRDGCSRWLNILQQGSPIFGNADDFPPDER 362 Query: 234 -----------------VLAHLQNLVMTFSD-----ITEE---------------RQIRQ 256 V AH ++M D +T + Q Sbjct: 363 RFLLNHDSQSFVIIPIFVHAHWWGVIMIERDHAASTVTSQELGALMSIGRSFGVAIQRES 422 Query: 257 LEGNILAAMCSSP-----PFHEMGEI----ICRNIESVLNESHVSLFA-----LRNGMPI 302 + + A + F E+ I + + + + L + Sbjct: 423 SDHRLHQAKIAFESTAEGIFITDDELRTIAINQGFTDITGYTEDDVLGNIPNVLEADLKK 482 Query: 303 HWASSSHGAEIQNAQSWSATI--RQRDGAPAG---ILQIKTSSGAETSAFIERVADISQH 357 + W ++++ L + + ++ ADIS Sbjct: 483 PEPHREIWKALTREGRWRGEFWNQRKNNEQYAEWVTLTAVNNEEGKVINYVGVFADIS-- 540 Query: 358 MAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDH 413 E + S+ + +L+ DP+TGLPNR +H LD + A + + +D Sbjct: 541 ------EIKHSQSRLNELVNRDPLTGLPNRRLMHELLDHAIKYAEREQNEIALLFVDLDR 594 Query: 414 IQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL-ENDVSNITQIAD 472 + + D+LG+ D+ L EV R R ++ + R+ G +F+++ + + ++A Sbjct: 595 FKAINDTLGHQMGDKLLFEVSQRIRAAVRDSDAVARLGGDEFIVMMDVLREREDAAKVAK 654 Query: 473 ELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFF 530 ++ + + +ID + ++ S+GIS D + D L+ A AM ++ G N F+ Sbjct: 655 KIISSLQNEFLIDGRELFISASVGISVYPDDSLDVDGLIKAADIAMYQVKNKGKNNHCFY 714 Query: 531 SPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVP 590 S +++ ER L L+ A++ +Q ++ YQ Q+ ETG + G E+L RW P G V Sbjct: 715 SADLSQNAVERFTLENQLRRALARDQFEVYYQAQVSLETGRIIGAESLIRWIHPELGVVS 774 Query: 591 PSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQV 650 P++FIPLAEE G I IG WV+ ++ Q+ EW Q I +SVN+S + + + + V Sbjct: 775 PAKFIPLAEETGLIIPIGEWVLRQSAMQVKEWHDQGFDIDWVSVNVSGVQIQRSNFADTV 834 Query: 651 SDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLV 710 + + H L +EITES +M + + ++ +GV L++DDFGTG+S LS L Sbjct: 835 YGILVETDCESHLLELEITESTVMHNTEYVIDVFDRIKHLGVRLAIDDFGTGYSSLSHLK 894 Query: 711 SLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHC 770 LP+ +IKID+SFV A+ AI ++ QSL TV+AEGVET++Q L+KI C Sbjct: 895 RLPLDKIKIDQSFVRDLPNNSDDAAIATAINAMAQSLGFTVIAEGVETRQQASFLKKIGC 954 Query: 771 RVIQGYFFSRPLPAEEIPGWMSS 793 + QGY +SRP+ A E + + Sbjct: 955 QQGQGYLYSRPVTASEFTALLRA 977 Score = 55.4 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 88/280 (31%), Gaps = 34/280 (12%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLI--NENDEVMFFNPAAEKLWGYKREEVIGNNID 58 M LT A +D L M G +I + + + +P ++ K Sbjct: 1 MALT-AQTESD--LIHQLLHAMDGVAVIAFDAKLHIRYASPYGLQILSLKS--------- 48 Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDG---SKIWTRFALSKVSAEGK 115 P+ + + A ++ + + L+ G + A + + G Sbjct: 49 --------PSRAKLPASIGQRVLAELQKNNLKFTLQHAVGNALKSFCVQIATLEPATAGA 100 Query: 116 VYYLALVRDASVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY 171 Y+ ++D + A + + R L +D + + D + N + + Sbjct: 101 D-YVLYMQDVTERFASEYELRSMLNLLRKLIDASPDYICLKDGAGRWLHANTSGLSLLHL 159 Query: 172 CISEASGMQPDTLLNIPEFPADNRIRLQQL----LWKTARDQDEFLLLTRTGEKIWIKAS 227 G L ++ + ++ Q +W+T + E + G + Sbjct: 160 NGVNTQGKTDRELADLTHPNLRDFMQHWQAADEYVWETGQLLREEETVPLPGGDRVLDVI 219 Query: 228 ISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCS 267 P++ +V DIT+ +Q+ A + + Sbjct: 220 KVPLFHDDGSRHGIVTLGRDITDRKQVESQLRQRSAILDA 259 >UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q47ES6_DECAR Length = 832 Score = 729 bits (1882), Expect = 0.0, Method: Composition-based stats. Identities = 208/816 (25%), Positives = 348/816 (42%), Gaps = 54/816 (6%) Query: 16 PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRH 75 L++ N N ++ N A + G E++G L +L R Sbjct: 17 ALLDKLATPVFAKNLNGLYIYANEMAGIMLGRPAPEILGRKDSELFASELAG------RM 70 Query: 76 NREGGKARVEGMSRELQLEKKD----GSKI-WTRFALSKVSAEGKVYYLALVRDASVEMA 130 K G S ++ D G + W + + V ++ D + Sbjct: 71 QTCDDKLLASGESASCEIWLPDRGHGGERCYWLVRKVLRDKKGQIVGLASVATDITDRKR 130 Query: 131 QKEQT----RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 Q+ + + + L + LD E + C+ +++ S+ G +L Sbjct: 131 QELELIALKNKFAATLQALPDLMFELDIEGQFLDCHAQQSKLLVGSPSDMVGKTVHEVLP 190 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 P+ A L + + + +F L G + + + D + ++ Sbjct: 191 -PDVAAIFIQSLHEAMEQGISTGSQFQLDLPEGSRRFELSVAQKASDGDHQP-HFIVLSR 248 Query: 247 DITEER----QIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPI 302 DIT+ + +R+ E + A + ++P + ++ R I +L G + Sbjct: 249 DITDRKNAEHALRESESLMRAIVDNTPVEYWARDLEGRCIME------NALVVEHWGSLL 302 Query: 303 HWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALA 362 G W R+ +++ G +T F VA I + Sbjct: 303 GKRPEDSGVSPDELAVWQENNRRVYEGEVIEAEVEYQVGGQTRIFNNVVAPIKVDGQTIG 362 Query: 363 L--------EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV----DKAVSPVVYLIG 410 + +++++ + I +L +D +T LPNR + + L+ + + + LI Sbjct: 363 IVGFNQDITDRKRNEEEIHRLAFYDSLTHLPNRRLMFDRLEHALIGSARRKSHGALLLID 422 Query: 411 VDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVS----- 465 +D+ + + D+ G+ D+ LLEV R + ++ R+ G +FV++ + D + Sbjct: 423 LDNFKFLNDTHGHEVGDELLLEVAKRLKTCIRQGDTAARLGGDEFVVILEDIDGAGNGTI 482 Query: 466 NITQIADELRNVVSKPIMI------DDKPFPLTLSIGISYDLGK--NRDYLLSTAHNAMD 517 IA ++ ++ P + + SIGI+ LL A AM Sbjct: 483 QAELIAGHIQAQLNHPFSLVRPPERLSIDYRCASSIGIALFDDTMVTAKELLRRADTAMY 542 Query: 518 YIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEA 577 + G N +FF P M V R L L++AI Q L +Q Q+ ++G G EA Sbjct: 543 QAKAAGRNTLRFFDPEMQAAVTHRAALETELRKAIDEQQFHLCFQVQMD-QSGRPTGGEA 601 Query: 578 LARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN-IHIPALSVNL 636 L RW P G +PP+ FIPLAEE G I IG+WV+A ACRQLA W Q L+VN+ Sbjct: 602 LLRWEHPTRGTIPPASFIPLAEETGLIVPIGQWVLATACRQLAAWSQQPETSGLTLAVNV 661 Query: 637 SALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSV 696 SA FR + +Q+ D + G +L +E+TESMM+E I R+ L+ +G+ S+ Sbjct: 662 SARQFRQARFTDQLRDLLLQTGAPATRLKLELTESMMLEDTEAIIGRMAELKQLGIRFSL 721 Query: 697 DDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGV 756 DDFGTG+S L+ L LP+ ++KID+SFV LT+ A+ E I ++G L L V+AEGV Sbjct: 722 DDFGTGYSSLAYLKRLPLNQLKIDQSFVRDVLTDPNDAAIAETIVALGNILGLEVIAEGV 781 Query: 757 ETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 ET Q+ L + C+ QGY F RPLP E ++ Sbjct: 782 ETDAQWRFLANVGCKNYQGYLFGRPLPLLEFEQFLQ 817 >UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellular organisms RepID=Q5P8Z7_AZOSE Length = 1008 Score = 728 bits (1881), Expect = 0.0, Method: Composition-based stats. Identities = 197/814 (24%), Positives = 329/814 (40%), Gaps = 58/814 (7%) Query: 9 AADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPA 68 A L+ GA ++ + + +FNPA E+ +G G + Sbjct: 180 AERTRLQGILDALPDGAYIVGADHVIEYFNPALERQFGAPA----GRKCFEYLHGRSEAC 235 Query: 69 HPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVE 128 A G S + + G F + + +G + + D + Sbjct: 236 TWCN-------NDAVFAGASLQAEWTAPSGRSYDL-FEMPFRNPDGTLSKFEIFHDITPV 287 Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI- 187 + Q + + ++ + G+ + + L ++ Sbjct: 288 KESRRQLAEATLL---AHVGYWEWQLPAGVLHWGEQTDRLLGHAPGKVTPSGATFLAHVH 344 Query: 188 PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSD 247 P+ + EF L+ G +A+ YD + D Sbjct: 345 PDDRERVAGEFAGAVRNQCSYVSEFRLIRADGALRIARANGHLQYDREGRAVRVCGAIQD 404 Query: 248 ITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESV---LNESHVSLFALRNGMPIHW 304 ITE R N + I R + +N+ + F + I Sbjct: 405 ITELRATETALRNSEERFSIAMTAAPFAVAITRVEDGRFVEVNDKYELHFGWKREELIGK 464 Query: 305 ASSS--HGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSA--FIERVADISQHMAA 360 S + ++ Q W + ++ G+ + R DI Sbjct: 465 TSVETNLWPDPESRQRW-LEMLRQHGSVLDFETLGCERNGAVRQVSLSSRYIDIDGEKHV 523 Query: 361 LA-----LEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGV 411 L ++++++ IE L D +TGLPNR + A + + + Sbjct: 524 LTFVHDITDRKEAQARIEYLAHHDALTGLPNRVLFRDRFALATAWAERAHAKVALLFVDL 583 Query: 412 DHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVL-VSLENDVSNITQI 470 DH + + D+LG+ D L V R RE L+ + R+ G +F++ ++ D I Sbjct: 584 DHFKTINDTLGHPVGDGLLQGVALRLRECLRETDTVSRLGGDEFLIALTDIRDPQAINSA 643 Query: 471 ADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQ 528 ++ + +++P ++ T+SIGI+ D G++ D LL A AM ++ G N W+ Sbjct: 644 TAKIFDTLTRPFELEGHELTNTMSIGIAIWPDDGEDFDTLLKNADTAMYQAKRAGRNTWR 703 Query: 529 FFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGH 588 F++ MN E+L L AL A+ N++ L YQPQI +G + G+EAL RWH Sbjct: 704 FYTEQMNANAVEQLQLRTALHSALENDEFLLHYQPQINLASGHVVGVEALLRWHWDKREL 763 Query: 589 VPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPN 648 VPP RFIP AEE G I IG WV+ EAC Q W Q + ++VNLSA+ FR L Sbjct: 764 VPPDRFIPAAEESGLIVPIGDWVLREACMQAVRWTRQGLPELTIAVNLSAVQFRRGDLER 823 Query: 649 QVSDAMHAWGIDGHQ-----------LTVEITESMMMEHDTEIFKRIQILRDMGVGLSVD 697 V A+ G+D + + TES+ + ++ L+ +GV LS+D Sbjct: 824 SVVRALSLSGLDPARLELELTESLLLVD---TESV--------IETLRRLKSLGVRLSID 872 Query: 698 DFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVE 757 DFGTG+S L+ L V ++KID+SFV T+ A++ AI S+ +L L V+AEGVE Sbjct: 873 DFGTGYSSLAYLKRFAVDKLKIDQSFVRDIATDPDDAAIVRAIVSMAHTLKLQVIAEGVE 932 Query: 758 TKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 +++ L +C QGY ++RP+P + + W+ Sbjct: 933 SEDIDRFLHIFNCDEAQGYHYARPMPGDALAEWL 966 Score = 56.2 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 53/379 (13%), Positives = 105/379 (27%), Gaps = 47/379 (12%) Query: 18 LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNR 77 L +G V ++ V F+ A E + + + G + + R + Sbjct: 65 LASTKIGTVFLDAGLRVRRFSAAVEDVLALRASDA-GRPLAEIT---YRAGDASRFLADL 120 Query: 78 EGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVY------YLALVRDASVEMA- 130 + EG RE+ + + W + EG V Y + R + + Sbjct: 121 QHVATTGEGREREVDVGGR-----WYLERMLPFHGEGGVRDGVVLTYTDINRVKTAQTEV 175 Query: 131 --QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 + +L +D L ++ + I N A FG G + L+ Sbjct: 176 AVLAAERTRLQGILDALPDGAYIVGADHVIEYFNPALERQFGAPA----GRKCFEYLHGR 231 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 ++ A Q E+ +G P + L F DI Sbjct: 232 SEACTWCN--NDAVFAGASLQAEWT--APSGRSY--DLFEMPFRNPDGTLSKF-EIFHDI 284 Query: 249 TEERQIRQLEGNILAAMCSSP-----------PFHEMGEIICRNIESVLNESHVSLFALR 297 T ++ R+ + ++ V S + A Sbjct: 285 TPVKESRRQLAEATLLAHVGYWEWQLPAGVLHWGEQTDRLLGHAPGKVTP-SGATFLAHV 343 Query: 298 NGMPIHWASSSHGAEIQNAQSWSATIR--QRDGAPAGILQ---IKTSSGAETSAFIERVA 352 + + ++N S+ + R + DGA ++ + Sbjct: 344 HPDDRERVAGEFAGAVRNQCSYVSEFRLIRADGALRIARANGHLQYDREGRAVRVCGAIQ 403 Query: 353 DISQHMAALALEQEKSRQH 371 DI++ A + S + Sbjct: 404 DITELRATETALR-NSEER 421 >UniRef50_B6IWY2 Diguanylate cyclase, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IWY2_RHOCS Length = 979 Score = 728 bits (1880), Expect = 0.0, Method: Composition-based stats. Identities = 192/706 (27%), Positives = 317/706 (44%), Gaps = 40/706 (5%) Query: 116 VYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 + +LV E A +E+ +L +D++ +I LD + I NRA E+FG+ ++ Sbjct: 270 QFDRSLVERRRAEAALRERETRLSGIMDNVADGIITLDEDLRIETMNRAALELFGHAAAD 329 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFL--LLTRTGEKIWIKASISPVYD 233 G TL++ ++ + L + E + RTG + + Sbjct: 330 VVGKPFVTLIDEGDWTRVAMALMACLRQSGDGRRRETWSEIQGRTGRNVTFSMAFGVSQM 389 Query: 234 VLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMG------------------ 275 L + + DIT +Q Q + + + G Sbjct: 390 RLGDRRTAICVVQDITRRKQAEQALRDSEERLKLAVRATRSGVFDVDYANGIFWWSPEFI 449 Query: 276 EIICRN--IESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGI 333 E++ + + + + A +R RDG+ I Sbjct: 450 EMLGYEGSPPGQADLLFREILHPDDRPAALAQIERYLAGKSGDYHAFYRLRHRDGSLIWI 509 Query: 334 LQ---IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNL 390 + D++ ++++ + + + DP+TGLPNR L Sbjct: 510 EARGQAIRDDRGRPVRITGTMTDVT--------DRKRFEEQLMYVSTHDPLTGLPNRTLL 561 Query: 391 HNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQY 446 + L D+A V L+ +D + V DSLG+ D+ L + R ++P Sbjct: 562 QDRLQHAADQAERKGNSVAVLLLDLDRFKLVNDSLGHQVGDKLLRAISQRLASSVRPADT 621 Query: 447 LCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGKNR 505 + R+ +F++++ + + ++A+ + +S+P +D + +T SIGI+ G Sbjct: 622 IGRLGADEFLIIAEDLTEPQMAARVAETVLAGLSQPFGLDGQQLFITCSIGITLFPGDAT 681 Query: 506 D--YLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQP 563 D LL A AM + GGNG++FF+P MNE RL L AL+EAI Q +L YQP Sbjct: 682 DIGALLRDADTAMHTAKSAGGNGYRFFTPEMNEAAVARLSLEHALREAIDQGQFELHYQP 741 Query: 564 QIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWR 623 + ET + G+EAL RW P G +PPS FIP+AEE G I IG WV+ A Q+ W Sbjct: 742 KASLETMQTVGVEALLRWRHPEMGMIPPSTFIPVAEETGMILAIGDWVLRAALEQINRWE 801 Query: 624 SQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKR 683 + ++VN+S S+ +++ + +G+ L +EITE+ MM + I Sbjct: 802 RAGLEPLPVAVNVSVRQITSSHFADRIQSLLDEYGVRPDLLELEITETAMMSNMAFIADG 861 Query: 684 IQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSI 743 + LR G+ ++VDDFGTG+S LS L LP+T +K+D+SFV + A+ I ++ Sbjct: 862 LAELRGRGIRIAVDDFGTGYSSLSYLRRLPITTLKVDRSFVSEAPSNADTGAIAATIIAM 921 Query: 744 GQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPG 789 G+ L LTVVAEG+ET+EQ + LR+ C QG+ P+PA E+ Sbjct: 922 GRQLGLTVVAEGIETQEQLDFLRRHRCHEAQGFLIGFPVPAAELEA 967 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 97/259 (37%), Gaps = 7/259 (2%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR-D 64 A + ++ G + ++E+ + N AA +L+G+ +V+G LI D Sbjct: 284 ALRERETRLSGIMDNVADGIITLDEDLRIETMNRAALELFGHAAADVVGKPFVTLIDEGD 343 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRD 124 + R+ G R E+Q F +S++ + + +V+D Sbjct: 344 WTRVAMALMACLRQSGDGRRRETWSEIQGRTGRNVTFSMAFGVSQMRLGDRRTAICVVQD 403 Query: 125 ASVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY--CISEASG 178 + ++ R +L +AV V +D I + F EM GY + Sbjct: 404 ITRRKQAEQALRDSEERLKLAVRATRSGVFDVDYANGIFWWSPEFIEMLGYEGSPPGQAD 463 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 + +L+ + PA + L K+ + L R G IWI+A + D Sbjct: 464 LLFREILHPDDRPAALAQIERYLAGKSGDYHAFYRLRHRDGSLIWIEARGQAIRDDRGRP 523 Query: 239 QNLVMTFSDITEERQIRQL 257 + T +D+T+ ++ + Sbjct: 524 VRITGTMTDVTDRKRFEEQ 542 >UniRef50_B8DSE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DSE5_DESVM Length = 1251 Score = 727 bits (1879), Expect = 0.0, Method: Composition-based stats. Identities = 209/870 (24%), Positives = 371/870 (42%), Gaps = 84/870 (9%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNN------ 56 + D + A ++ ++++ + V+ +N A E++ G+ E++G Sbjct: 336 MQDQLSEAWRRLRDIIDFLPDAVLVLDASRRVIAWNRAMEEMTGHSASEMLGRGNFAYAL 395 Query: 57 ---------IDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFAL 107 + P Y R + G K E L + G+ +WT + Sbjct: 396 PFYGERIPLLGDWFFSPDMPQPSHYTRFSEHGDKLAAEAYVPTLFGGR--GAHVWTVASA 453 Query: 108 SKVSAEGKV-YYLALVRDASVE----MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCN 162 + EG++ + +RD + ++ ++ +A+ + + + + + + + Sbjct: 454 LR-DGEGRLNGVIQTIRDITERHNQMRELEKSRQRYDMAISATNDGIWEWELDTNTLYHS 512 Query: 163 RAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLL-WKTARDQDEFLLLTRTGEK 221 E+ G + PE ++++ R + EF + G Sbjct: 513 PRCLEILGRAPDATLSPMAIAAILHPEDRLRVLTEVRRITGEDAERFEHEFRIRHTDGTW 572 Query: 222 IWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEG---NILAAMCSSPP-------- 270 W+ A + L + +DIT+ +Q + G +I A+ + Sbjct: 573 RWVLARGAARRGPGGRLNRVAGALADITDHKQGDAIAGILFHIANAINETRDLDELFLSI 632 Query: 271 -----------------------------FHEMGEIICRNIESVLNESHVS--LFALRNG 299 F + + +E + + + S L +R G Sbjct: 633 HTALRRHVQAPNFFIALINEPEDRLDFAYFADERDARYNPVEHISDPAVQSPTLEVIRTG 692 Query: 300 MPIHWASSSHGAEI---QNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQ 356 +H S A +W T + G G + ++ +E F R A++ Sbjct: 693 RQVHLHSDDIEARPVFGSRPAAWLGTPLRSRGKVIGAMVVQHYEDSE--FFSARDAELMV 750 Query: 357 HMA---ALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS-----PVVYL 408 +A A+A+E+++ + + L DP+TGLPNR L + ++ + + V + Sbjct: 751 PVAEQVAVAIERKQGEEMLTHLALHDPLTGLPNRALLLDRIERAIQRRRRNDSYRFAVLM 810 Query: 409 IGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEND-VSNI 467 + +D + + DS G+ D L+EV R R ++ + R+ G +F L+ + D I Sbjct: 811 LDLDRFKFINDSHGHTTGDNLLVEVARRMRPVVRAGDTVARLGGDEFALLLEDVDSPRRI 870 Query: 468 TQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGN 525 QI L + +P+ + K + SIG+ D LL A AM + G Sbjct: 871 VQITRRLLAALERPVRMGAKVVRTSASIGMVLRTQGYDTADALLRDADIAMYQAKAQGKG 930 Query: 526 GWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPL 585 ++ F+ +M+ E + L L A+ QL L YQP + + L G EAL RW P Sbjct: 931 RFRVFNQSMHRHTMEMMTLEGDLSMAMRRKQLYLEYQPVLAVDGARLLGFEALVRWRHPT 990 Query: 586 HGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ--NIHIPALSVNLSALHFRS 643 G VPP+RFIP+AEE G I IG+WV+ +A LA WR+ H +SVNLSA Sbjct: 991 EGAVPPARFIPMAEETGLILRIGQWVLEQAAATLARWRATLPGAHDLYVSVNLSARQASQ 1050 Query: 644 NQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGF 703 L +V+ + G+ L +EITE+ +M+ +R++ LR +GVG+ +DDFGTG+ Sbjct: 1051 PNLTGRVARILSDTGLPPEALKLEITETAIMKDPDGALQRLEALRRLGVGIGIDDFGTGY 1110 Query: 704 SGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFE 763 S L+ L PV +K+D+SFV + ++ + ++G+SL L VVAEGVET EQF Sbjct: 1111 SSLAYLQRFPVDTLKVDRSFVSAVAGDAENREIVRTVVTLGRSLGLHVVAEGVETAEQFA 1170 Query: 764 MLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 ++ ++ C +QGY FSRP+ E ++++ Sbjct: 1171 IVAELGCHSVQGYHFSRPVAEERAVAFIAA 1200 Score = 117 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 131/442 (29%), Gaps = 91/442 (20%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGY-KREEVIGNNIDMLIPR 63 D D A + + +G + NP ++WG EE++ + Sbjct: 175 DLDRAREQ-YHAIFTNAPVGIFRVTPEGRYENVNPEYARIWGCPTTEEML-----ECVSD 228 Query: 64 DLRPAHPEYIRHNREGGKARVEGM--SRELQLEKKDGSKIWTRFALSKVSAEGKVYYL-- 119 R + R G + G EL+L+++DGS W + V Sbjct: 229 IPRQMYANPADRQRFVGALQATGRVDRMELRLKRRDGSLFWGLVSARLVRGPAPAQAAQT 288 Query: 120 ------------------------------------ALVRDASVEMAQK----EQTRQLI 139 V D + + A + E R+L Sbjct: 289 GQIAKTGQTAGTGVTNGTYRADAKAGNAPAEVDYIDGFVLDITEQKAMQDQLSEAWRRLR 348 Query: 140 IAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP----------------DT 183 +D L V+VLD R ++ NRA EM G+ SE G D Sbjct: 349 DIIDFLPDAVLVLDASRRVIAWNRAMEEMTGHSASEMLGRGNFAYALPFYGERIPLLGDW 408 Query: 184 LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVM 243 + + R + K A + L G +W S + D L ++ Sbjct: 409 FFSPDMPQPSHYTRFSEHGDKLAAEAYVPTLFGGRGAHVW--TVASALRDGEGRLNGVIQ 466 Query: 244 TFSDITEE----RQIRQLEGNILAAMCSSPPFH--------------EMGEIICRNIES- 284 T DITE R++ + A+ ++ EI+ R ++ Sbjct: 467 TIRDITERHNQMRELEKSRQRYDMAISATNDGIWEWELDTNTLYHSPRCLEILGRAPDAT 526 Query: 285 VLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGIL---QIKTSSG 341 + + ++ + + + E IR DG +L + G Sbjct: 527 LSPMAIAAILHPEDRLRVLTEVRRITGEDAERFEHEFRIRHTDGTWRWVLARGAARRGPG 586 Query: 342 AETSAFIERVADISQHMAALAL 363 + +ADI+ H A+ Sbjct: 587 GRLNRVAGALADITDHKQGDAI 608 Score = 71.2 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 46/331 (13%), Positives = 85/331 (25%), Gaps = 73/331 (22%) Query: 113 EGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYC 172 ++ + Q + + + PE N + ++G Sbjct: 158 HAHAAASGQADASTQAVDLDRAREQYHAIFTNAPVGIFRVTPEGRYENVNPEYARIWGCP 217 Query: 173 ISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTAR-DQDEFLLLTRTGEKIWIKASISPV 231 +E + +R R L T R D+ E L R G W S V Sbjct: 218 TTEEMLECVSDIPRQMYANPADRQRFVGALQATGRVDRMELRLKRRDGSLFWGLVSARLV 277 Query: 232 Y------------------------------------DVLAHLQNLVMTFSDITEERQIR 255 + A + + DITE++ ++ Sbjct: 278 RGPAPAQAAQTGQIAKTGQTAGTGVTNGTYRADAKAGNAPAEVDYIDGFVLDITEQKAMQ 337 Query: 256 QLEGNILAAMCSSPPFHEMGEII----------CRNIESVLNESHVSLFALRNG------ 299 + F ++ R +E + S + N Sbjct: 338 DQLSEAWRRLRDIIDFLPDAVLVLDASRRVIAWNRAMEEMTGHSASEMLGRGNFAYALPF 397 Query: 300 ------------------MPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSG 341 P H+ S + A+++ T+ GA + G Sbjct: 398 YGERIPLLGDWFFSPDMPQPSHYTRFSEHGDKLAAEAYVPTLFGGRGAHVWTVASALRDG 457 Query: 342 -AETSAFIERVADISQHMAALALEQEKSRQH 371 + I+ + DI++ + E EKSRQ Sbjct: 458 EGRLNGVIQTIRDITERHNQMR-ELEKSRQR 487 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 727 bits (1877), Expect = 0.0, Method: Composition-based stats. Identities = 167/578 (28%), Positives = 283/578 (48%), Gaps = 35/578 (6%) Query: 239 QNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRN 298 + L +T S I E G + + +E+ +++ + E +L + L + Sbjct: 297 EWLRITLSSIGEAVITTDENGTVTFSN------YEIQKMLGLSEEEILGKKLDKLLSGLV 350 Query: 299 GMPIHWASSSHGAEIQNAQSWSATI----------RQRDGAPAGILQIKTSSGAETSAFI 348 + R +G A I + S + Sbjct: 351 DKREKVYKIPIEEVVNRGSMIKLETDLSLVTPGGRRLVEGTVAPI---RNDSDVIIGTVV 407 Query: 349 ERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----P 404 + DI+ E +K + + + +DP+TGLPNR+ + L + ++ Sbjct: 408 A-LKDIT--------EIKKKDEILYNMEYYDPLTGLPNRSLFSDRLKMALAQSKRNNEMC 458 Query: 405 VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-ND 463 + ++ +D+ + + D+LG++ D L +V + + L+ + RI G +F+++ + D Sbjct: 459 ALIILDLDNFKAINDTLGHSVGDMLLKQVAEKIKGYLREVDTVARIGGDEFIIIQPQIKD 518 Query: 464 VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDL--GKNRDYLLSTAHNAMDYIRK 521 +++ T+ AD + +P +++ K + +T S+GI G++ + A A+ ++ Sbjct: 519 INDATRAADRILKKFQQPWILEGKEYYITASMGIGIYPNGGEDPQTIFKNADTALYRAKE 578 Query: 522 NGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARW 581 G N +Q ++ +MN+ V +RL + +L+ AI + L YQPQI +TG++ G EAL RW Sbjct: 579 LGRNNYQLYTESMNQKVLQRLDIENSLRRAIEKEEFVLFYQPQIDIKTGKIVGFEALLRW 638 Query: 582 HDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHF 641 + P +G +PP FIP+AE+ G I IG WV+ ACRQ +W + +SVNLSA F Sbjct: 639 YHPDYGLMPPMEFIPVAEDSGLIVVIGEWVLETACRQNKKWIECGLEPHLISVNLSARQF 698 Query: 642 RSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGT 701 + + + + + G+ L +EITES M+ + + LR G+ +S+DDFGT Sbjct: 699 QRSNIVEVIDRIRSSTGLAPELLELEITESTAMQDLSFTIDVLNQLRKKGIRVSLDDFGT 758 Query: 702 GFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQ 761 G+S L+ L LP+ +KIDKSFV + A+ + + S+ L+LTVVAEGVETKEQ Sbjct: 759 GYSSLNYLRQLPIDTLKIDKSFVQDIRANSKEEAIAKTVISLAHKLDLTVVAEGVETKEQ 818 Query: 762 FEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI 799 L+K C QGY FS+PLPAEEI + I Sbjct: 819 LLFLKKEKCDKAQGYLFSKPLPAEEIEKMLRDKKCFVI 856 Score = 62.8 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 62/137 (45%), Gaps = 5/137 (3%) Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI- 187 ++Q L I + + VI D + N +M G E G + D LL+ Sbjct: 290 RELRKQHEWLRITLSSIGEAVITTDENGTVTFSNYEIQKMLGLSEEEILGKKLDKLLSGL 349 Query: 188 -PEFPADNRIRLQQLLWKTA--RDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 + +I +++++ + + + + + L+T G ++ ++ +++P+ + + V+ Sbjct: 350 VDKREKVYKIPIEEVVNRGSMIKLETDLSLVTPGGRRL-VEGTVAPIRNDSDVIIGTVVA 408 Query: 245 FSDITEERQIRQLEGNI 261 DITE ++ ++ N+ Sbjct: 409 LKDITEIKKKDEILYNM 425 Score = 50.8 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 50/146 (34%), Gaps = 6/146 (4%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEY- 72 L + +EN V F N +K+ G EE++G +D L+ + Y Sbjct: 299 LRITLSSIGEAVITTDENGTVTFSNYEIQKMLGLSEEEILGKKLDKLLSGLVDKREKVYK 358 Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEG--KVYYLALVRDASVEMA 130 I + + + +L L G ++ ++ + + + + ++D + Sbjct: 359 IPIEEVVNRGSMIKLETDLSLVTPGGRRL-VEGTVAPIRNDSDVIIGTVVALKDITEIKK 417 Query: 131 QKEQTR--QLIIAVDHLDRPVIVLDP 154 + E + + L + D Sbjct: 418 KDEILYNMEYYDPLTGLPNRSLFSDR 443 >UniRef50_A6QA23 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QA23_SULNB Length = 703 Score = 726 bits (1876), Expect = 0.0, Method: Composition-based stats. Identities = 180/685 (26%), Positives = 336/685 (49%), Gaps = 26/685 (3%) Query: 132 KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA--SGMQPDTLLNIPE 189 ++ + +A+ ++ D H + + ++ EM GY E + L + Sbjct: 11 EKIKERFELALCGSKTSILDWDMVNHTLYISPSWKEMLGYREDELPNAESTWKKLAYPRD 70 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 R + + ++ L + G IW+ +YD + +V T +DIT Sbjct: 71 IVNVMRSLKKHIREHRKVFENNHRLRHKDGHWIWVLGRARIIYDEAGNPIRMVGTHTDIT 130 Query: 250 EERQIR---QLEGNILAAMCSSPPFHEMGEII---CRNIESVLNESHVSL----FALRNG 299 EE++++ + +L + + +M I + E + + F++ Sbjct: 131 EEKELQLKYSQQAQVLEQIHDAVILLDMDGFIRSWNKGSEILFEYRADEVIGKNFSILFS 190 Query: 300 MPIHWASSSHGAEIQNAQSWSAT--IRQRDGAPAGI---LQIKTSSGAETSAFIERVADI 354 I A +E++ + ++++ G P + + ET+ + + DI Sbjct: 191 DNITSAYEKWISELKENGEYKGEMFLQKKSGEPLYAVFSFSLLKNQNGETTEVVSLIHDI 250 Query: 355 SQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIG 410 ++ A A+ QE+ + + D +T LPNR + L+ + K ++ I Sbjct: 251 TEQKKAEAVLQEQ-KNILRYQAHHDALTRLPNRVLFFDRLEQSIRKTARSEKDFALFFID 309 Query: 411 VDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQ 469 +D + + DSLG++ D+ L R +E ++ + L R+ G +F ++ + + + Sbjct: 310 LDKFKHINDSLGHSIGDRVLRVTAKRIKETIRQEDTLARLSGDEFTVIMEDLGHPEDASV 369 Query: 470 IADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGW 527 +A+++ V+ KP+ ID+ ++ SIGIS + + LL A AM ++NG N + Sbjct: 370 LAEKILLVLQKPMYIDEYTLYISGSIGISLYPQDAMDTESLLKYADTAMYKAKENGRNTF 429 Query: 528 QFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHG 587 +F++P M E ER+ + +LKEAI +L + YQPQI A + G+EAL RW P G Sbjct: 430 EFYAPEMTEYALERIAMKTSLKEAIEKEELCVHYQPQIDARAECIIGVEALVRWQHPTRG 489 Query: 588 HVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLP 647 + P FI LAE+ G I +I +WV+ A +Q++ W + + L++N+S + Sbjct: 490 LLHPEAFISLAEDTGLIVDIDKWVMRTAMKQVSTWHQEGLVSDVLALNISIKQLEGHNFM 549 Query: 648 NQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLS 707 +++ + + L +EI E +M++ TE +R++ L MG+G+S+DDFGTG+S LS Sbjct: 550 EEIAACLDDFDFKPKWLELEIPEGQVMKNHTETIERLKELSVMGIGISIDDFGTGYSSLS 609 Query: 708 RLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRK 767 L LP+ +KIDKSF++ + +A+++AI ++ SL L V+AEGVET +Q + L + Sbjct: 610 LLKRLPINRLKIDKSFIEFIP-NEEDVAIVKAIIALANSLKLDVIAEGVETDDQKDFLVE 668 Query: 768 IHCRVIQGYFFSRPLPAEEIPGWMS 792 C IQGY++SRP+ +E++ ++ Sbjct: 669 NGCTKIQGYYYSRPIASEQMKHFLQ 693 Score = 112 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 49/287 (17%), Positives = 102/287 (35%), Gaps = 9/287 (3%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 K T+ D F AL + + + + ++ +P+ +++ GY+ +E+ Sbjct: 5 KKTEMDEKIKERFELALCGSKTSILDWDMVNHTLYISPSWKEMLGYREDELPNAE-STWK 63 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYYL 119 +R ++ + + +L KDG IW + A + + Sbjct: 64 KLAYPRDIVNVMRSLKKHIREHRKVFENNHRLRHKDGHWIWVLGRARIIYDEAGNPIRMV 123 Query: 120 ALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 D + E + + Q ++ + VI+LD + I N+ +F Y E G Sbjct: 124 GTHTDITEEKELQLKYSQQAQVLEQIHDAVILLDMDGFIRSWNKGSEILFEYRADEVIGK 183 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 L + A + L + + E L ++GE ++ S S + + Sbjct: 184 NFSILFSDNITSAYEKWI--SELKENGEYKGEMFLQKKSGEPLYAVFSFSLLKNQNGETT 241 Query: 240 NLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVL 286 +V DITE+++ +L + + + + R VL Sbjct: 242 EVVSLIHDITEQKKAEA----VLQEQKNILRYQAHHDALTRLPNRVL 284 >UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZB1_DESAC Length = 1092 Score = 726 bits (1876), Expect = 0.0, Method: Composition-based stats. Identities = 189/735 (25%), Positives = 321/735 (43%), Gaps = 71/735 (9%) Query: 126 SVEMAQKEQTRQLIIAVDHLDRPVIVLDPE-----RHIVQCNRAFTEMFGYCISEASGMQ 180 E + + D+++ V + + + V+ N +++ GY +E M Sbjct: 351 ERETELSRERDRFQALFDNVNDAVFMCSVDEEQRVGNFVEVNGVASDLLGYSRAEFLQMT 410 Query: 181 PDTL------LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 P + L++ + + Q + E ++T+ G K+ + ++ P+ Sbjct: 411 PMDIDTTIDSLSLRDHIGSISMESDQPIPGLI----ETTMVTKQGRKMPFEINLQPLR-- 464 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNILAAMCSS---PPFHEMGEIICRNIE-------- 283 L Q LV +IT+ +Q ++ ++ + S F ++ +C E Sbjct: 465 LDDQQMLVCVARNITDRKQAQRALNALVTSTVGSTGKSCFEKILRELCLYFEMDGALIGI 524 Query: 284 -----SVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWS------------------ 320 V S + L R+G S ++N + Sbjct: 525 PNDGDHVECLSMLFLGHYRDGYSYPLVGSPCEKVLRNEVCFYPSGVRELFPQDVDFKQMG 584 Query: 321 ------ATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKS------ 368 + + G+L + + I AA LE+ K+ Sbjct: 585 IESYFGIPLVNSEQKVVGVLNGFSRQRMHLPPDAREILSIVAARAATELERLKADEALAE 644 Query: 369 -RQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPV----VYLIGVDHIQDVIDSLGY 423 R+ + L DP+T LPNR L+ V A + I +D +++ DSLG+ Sbjct: 645 HRKQLSYLAFHDPLTQLPNRLRFTEVLEAAVGDAEGHGRYLSLLFIDLDRFKNINDSLGH 704 Query: 424 AWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNI-TQIADELRNVVSKPI 482 + D+ L V R + L R+ G +F ++ + A + + +S+P Sbjct: 705 SIGDKLLQAVARRTGSLIDSADVLARLGGDEFAILLFNCVTPVVGADTAQRVIDALSQPF 764 Query: 483 MIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKE 540 IDD ++ SIGI+ + D L+ A AM + G N ++F+ +MN E Sbjct: 765 QIDDYSLHVSASIGITVAPVDAREPDELIKCADIAMFKAKDAGRNTYKFYERSMNLKTHE 824 Query: 541 RLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEE 600 L+L L+ A+S +QL+L YQPQ+ ++ + G EAL RW+ P G V P FIPLAEE Sbjct: 825 LLLLENDLRHALSRDQLELYYQPQLDLQSNCIVGFEALLRWNHPERGLVSPLEFIPLAEE 884 Query: 601 IGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGID 660 G I ++G W++ ACRQ+ W ++ ++VN+SA F L + V + G+ Sbjct: 885 TGLIVSMGEWILRSACRQIRTWNEEHGRQLRVAVNISARQFHHYDLVHCVEKVLEQTGVP 944 Query: 661 GHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKID 720 L +EITES++M + + L+ +GV L++DDFGTG+S LS L P+ +KID Sbjct: 945 TEWLELEITESLLMYDIQSSIETMMRLKKLGVRLAIDDFGTGYSSLSYLKKFPICSLKID 1004 Query: 721 KSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSR 780 KSFVD LT+ A+ E+ ++ ++L VVAEG+E +EQ + L++ C+ QGY SR Sbjct: 1005 KSFVDDLLTDASDAAIAESTLALASKMDLMVVAEGIEQQEQLDYLQQRGCQFGQGYLISR 1064 Query: 781 PLPAEEIPGWMSSVL 795 PLP + + Sbjct: 1065 PLPVAQCTQFCRERF 1079 Score = 47.7 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 41/134 (30%), Gaps = 6/134 (4%) Query: 12 GIFFPALEQNMMGAVL--INEN---DEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 F + + ++E + N A L GY R E + + Sbjct: 361 DRFQALFDNVNDAVFMCSVDEEQRVGNFVEVNGVASDLLGYSRAEFLQMTPMDIDTTIDS 420 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDAS 126 + ++I + G+ E + K G K+ L + + + + + R+ + Sbjct: 421 LSLRDHIGSISMESDQPIPGL-IETTMVTKQGRKMPFEINLQPLRLDDQQMLVCVARNIT 479 Query: 127 VEMAQKEQTRQLII 140 + L+ Sbjct: 480 DRKQAQRALNALVT 493 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 726 bits (1876), Expect = 0.0, Method: Composition-based stats. Identities = 172/570 (30%), Positives = 274/570 (48%), Gaps = 35/570 (6%) Query: 237 HLQNLVMTFSDITEERQIRQLEGNILAAM--CSSPPFHEMGEIICRNIESVLNESHVSLF 294 L F + TE + I + ++ G ++ +NI + + H F Sbjct: 157 QLMLTAKVFENTTEGIVVTDSTACITNVNPSFEAITGYDRGSVLGQNISILQSGRHDRRF 216 Query: 295 ALRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGA----PAGILQIKTSSGAETSAFI 348 + A W + R+++G I I+T G +T +++ Sbjct: 217 -----------YGKMWQTLLTAGKWQGEVWNRRKNGEIYPQWVNISAIRTGDG-QTESYV 264 Query: 349 ERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV----DKAVSP 404 D+++ ++S +++ L D +T LPNR H+ L+ + D Sbjct: 265 GVFTDLTRI--------KESEENLLYLSGHDALTELPNRLLFHDRLNQTLVESADSGSIV 316 Query: 405 VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLEND 463 V ++ +D + + DS+G+ D L EV R R L R+ G +F +++ Sbjct: 317 AVLIVDLDRFKVINDSMGHEVGDSLLCEVATRLRAICPAKATLARLGGDEFGIVLPNMTQ 376 Query: 464 VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRK 521 + +A E+ V++PI I + F + SIG++ G+ L+ A +AM + ++ Sbjct: 377 NRDAALLAQEVLTRVAQPITISEVEFAVGASIGMTVYPLDGEKPSVLMRNAESAMYHAKQ 436 Query: 522 NGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARW 581 +G N +QF+ +N R++L + L+ A+ + L YQPQ+ TG+L G+EAL RW Sbjct: 437 SGRNNFQFYRSELNTASLARILLESGLRNAVDRQEFLLFYQPQMELATGKLIGMEALIRW 496 Query: 582 HDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHF 641 P G V P FIPLAEE G + +G+W + EACRQ W Q +SVNLS + F Sbjct: 497 QHPEQGMVSPGEFIPLAEETGLVIPMGQWALKEACRQSKVWMDQTGVPLRISVNLSGIQF 556 Query: 642 RSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGT 701 R V + G+ H L +E+TES+ M E +++ IL GV L++DDFGT Sbjct: 557 RLPDFTEMVMRTVGESGLPPHCLELELTESIAMGDVEETLEKLTILSRFGVLLAIDDFGT 616 Query: 702 GFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQ 761 GFS LS L P+ +KID+SFV C + A++ A ++ SLNL V+AEGVE EQ Sbjct: 617 GFSSLSYLKKFPIDTLKIDQSFVRNCTRDPEDAAIIRAFINLAHSLNLEVIAEGVEHLEQ 676 Query: 762 FEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 E L + C IQGYF+ RPL ++ +M Sbjct: 677 LEFLAQESCDEIQGYFYGRPLSGDKFEMFM 706 Score = 96.7 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 50/148 (33%), Gaps = 6/148 (4%) Query: 131 QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEF 190 + Q ++ ++V D I N +F + GY G +L Sbjct: 154 AERQLMLTAKVFENTTEGIVVTDSTACITNVNPSFEAITGYDRGSVLGQNIS-ILQSGRH 212 Query: 191 PADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITE 250 ++ Q L + Q E + GE +IS + ++ V F+D+T Sbjct: 213 DRRFYGKMWQTLLTAGKWQGEVWNRRKNGEIYPQWVNISAIRTGDGQTESYVGVFTDLTR 272 Query: 251 ERQIRQLE-----GNILAAMCSSPPFHE 273 ++ + + L + + FH+ Sbjct: 273 IKESEENLLYLSGHDALTELPNRLLFHD 300 Score = 67.4 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 45/141 (31%), Gaps = 8/141 (5%) Query: 18 LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNR 77 E G V+ + + NP+ E + GY R V+G NI +L H Sbjct: 165 FENTTEGIVVTDSTACITNVNPSFEAITGYDRGSVLGQNISILQSGR----HDRRFYGKM 220 Query: 78 EGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYLALVRDASVEMAQKEQT 135 E+ +K+G W + + Y+ + D + +E Sbjct: 221 WQTLLTAGKWQGEVWNRRKNGEIYPQWVNISAIRTGDGQTESYVGVFTDLTRIKESEENL 280 Query: 136 RQLI--IAVDHLDRPVIVLDP 154 L A+ L ++ D Sbjct: 281 LYLSGHDALTELPNRLLFHDR 301 >UniRef50_Q118H0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Trichodesmium erythraeum IMS101 RepID=Q118H0_TRIEI Length = 866 Score = 726 bits (1876), Expect = 0.0, Method: Composition-based stats. Identities = 192/852 (22%), Positives = 353/852 (41%), Gaps = 73/852 (8%) Query: 14 FFPALEQNMMGAVLINE--NDEVMFFNPAAEKLWGYKREEVIGNNID--MLIPRDLRPAH 69 + + + A+LI+ + ++F N ++G IG P++ Sbjct: 11 LWEIFTKLIPAAILISRAVDGIIIFHNEFLGVIFGLSNYNFIGFPTSNFYFSPQEYEFLL 70 Query: 70 PEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEM 129 + + + E+ L+K DG+ W + ++S + G+ L+++ + + Sbjct: 71 ANFYGEVMLPNSKKKQTFDCEVYLKKIDGTPFWAKVSMSYIKFNGETAILSVLSPSLEDT 130 Query: 130 AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE 189 + ++ + ++L VI+ D + +IV N A T MFGY +E G P +L+ PE Sbjct: 131 LIQRSLQKKALIFEYLYDGVILTDTQGNIVDWNSAATRMFGYSKTEVLGKSP-AILHKPE 189 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 + + + + + E + + G + + ++ P+ D + + DIT Sbjct: 190 IASVLTKEIIERIKVNDKWIGEINFIRKDGSEGICETTVVPILDQQNQMVGSIGVNRDIT 249 Query: 250 EERQ-IRQLEGNILAAMCSSPPFHEMG-----EIICRNIES---VLNESHVSLFAL--RN 298 ++++ AA+ S + E I N +N + LF + Sbjct: 250 QQKRAQEFALQQAEAALKESEERYHRLVKNSPEAIAVNYMEKIVYINAAGAKLFGANCPD 309 Query: 299 GMPIHWASSSHGAEIQNAQSWSATIRQRDG--APAGILQIKTSSGAETSAFIERV----- 351 + +E+ + Q G ++ +G I + Sbjct: 310 EIIGQLLRKFIPSELIETEKQRLQQVQEQGMETHLQEEKLIKLNGEIIDVEILGIPYTYD 369 Query: 352 -ADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV-----SPV 405 +Q + ++K++ + D +TGLPNR L + ++ Sbjct: 370 GKAATQIILKDITHRKKTQAKLVYDALHDTLTGLPNRALFFERLKLALCRSRKQPNYQFN 429 Query: 406 VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL-ENDV 464 V + +D + + DSLG+ D+ L+ + R + +K L R+ G +F ++ +++ Sbjct: 430 VLFLDLDRFKVINDSLGHTIGDRLLIAISKRLQNCIKASDTLARLGGDEFTILLESPSNL 489 Query: 465 SNITQIADELRNVVSKPIMIDDKPFPLTLSIGIS------YDLGKN-----------RDY 507 + T++A + + +PI ++ T SIGI + + Sbjct: 490 QDATKVAGRIHQELVRPIYLEGNEIFTTASIGIVTNRRNFIEDIDENHPLICPIYNKPED 549 Query: 508 LLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAIS-------NNQLKLV 560 LL A AM + G + F M+ L L L+ AI N+Q L Sbjct: 550 LLRDADIAMYRAKTLGKARHEVFDLTMHREAISLLQLENDLRRAIEIIKQNPVNSQFILN 609 Query: 561 YQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLA 620 YQP I TG + G E+L RW P G + P +FIPLAEE G I +G W++ C QL Sbjct: 610 YQPIICLNTGIITGFESLLRWAHPTRGLIYPGQFIPLAEETGLIVPLGMWILRSVCHQLT 669 Query: 621 EWRSQ-----------------NIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQ 663 W+ + +SVNLS+ H L +++ + Sbjct: 670 TWQQECSTKYDSGCCMYSSCQFPTDNFTVSVNLSSKHLSQPNLLEEINTILEETNCQPSY 729 Query: 664 LTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSF 723 L +EITE+++ME+ + + + L++ + L +DDFGTG+S LS L P+ IKID+SF Sbjct: 730 LELEITETLIMENVSLATQILNKLKNKNIKLLIDDFGTGYSSLSYLHQFPIDSIKIDRSF 789 Query: 724 VDRCLTEKRILA--LLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRP 781 V R ++ ++ AI + +L L ++AEG+ET+ Q + L+K+ C QGY FS+P Sbjct: 790 VSRLDSDTSGQTCKIVGAIIGLANNLGLEIIAEGIETRTQMQKLKKLQCNKGQGYLFSKP 849 Query: 782 LPAEEIPGWMSS 793 L E+ + + Sbjct: 850 LEGEDATKLLRN 861 >UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=C7QU83_CYAP0 Length = 1514 Score = 726 bits (1875), Expect = 0.0, Method: Composition-based stats. Identities = 192/734 (26%), Positives = 325/734 (44%), Gaps = 78/734 (10%) Query: 127 VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA-SGMQPDTLL 185 + A T +L + + I+LDPE I N A T++F G + Sbjct: 787 AQQAVAATTEKLNRILATISDGFILLDPEWVITYHNTATTKLFPAKSHPLGLGKTLWEVW 846 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 D RL+ + + Q E+ + E++W++ + L + Sbjct: 847 PS-WVNTDLEHRLRYAMTEQVSQQCEYHCASSLTEELWLEIYAYSFEEGLG------IFL 899 Query: 246 SDITEERQIRQLEGNILAAMCSSPPFHEMG------------------EIICRNIES--- 284 DI++ ++ A+ E+ E I R E+ Sbjct: 900 HDISDRKRSEAERHKAEIALKQYSEQLELRVAERTAKLSQTIAELHQVEEILRGKETHYR 959 Query: 285 --------------------VLNESHVSLFALRNGMPIH-WASSSHGAEIQNAQSWS--- 320 +E ++ ++ G + G Q+ W Sbjct: 960 QALNLTNTGSWEFDLASEKVFWSEQVEIIWGMKPGTFRGEFDQVKAGIHPQDFDLWQQNV 1019 Query: 321 -----------ATIR--QRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEK 367 R DG+ + I + I + + E++ Sbjct: 1020 QACIEEGKEHNLEFRVVHPDGSIHWVQAIGNAEYDSQGHPIRL-----RGLIMDVTERKT 1074 Query: 368 SRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGY 423 S++ + + D +T LPNR L LD + +A V I +D + + DS+G+ Sbjct: 1075 SQERLNYMAHHDHLTDLPNRLLLKARLDQSIQQATRKRTKLAVVFIDLDRFKHINDSMGH 1134 Query: 424 AWADQALLEVVNRFREKLKPDQYLCRIEGTQFV-LVSLENDVSNITQIADELRNVVSKPI 482 A D L ++ R R+ L+ + RI G +FV ++ D+ + + + +L V +P Sbjct: 1135 AAGDALLQQLAQRLRQVLRSSDTVARISGDEFVAVLEDIEDIQHASMVVAKLMTVFEEPF 1194 Query: 483 MIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKE 540 ++ + +T S+G+S D G + LL A +AM ++ G N + F++ M E Sbjct: 1195 PLEGQIIHMTSSMGLSLFPDDGMDTAILLRNADSAMYRAKEEGRNTYCFYAEEMTSAAFE 1254 Query: 541 RLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEE 600 ++ AL+ A+ N+ LVYQPQI + G+E L RWH P G V P++FIP+AE+ Sbjct: 1255 YVLFENALRGALKRNEFYLVYQPQIDLSSHRWVGMEVLLRWHHPELGIVSPAQFIPIAEQ 1314 Query: 601 IGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGID 660 G I+ IG WV+ AC Q W Q I ++VN++A + N + V DA+ + G+ Sbjct: 1315 SGLIQEIGTWVLYRACCQAKTWLDQGIDFGHIAVNVAAPQIQQNNFVHLVQDALDSSGLP 1374 Query: 661 GHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKID 720 L +E+TE ++M + K++++L+DMG+ L++DDFGTG+S LS L LP+ ++KID Sbjct: 1375 SPHLELELTEGLVMHQTEDRIKQLEVLQDMGIYLAIDDFGTGYSSLSYLKRLPINKLKID 1434 Query: 721 KSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSR 780 KSFV + +A+ EA+ ++G++LNL ++AEGVE + Q LR+ C QGY +S+ Sbjct: 1435 KSFVRDIPHDTNDMAISEAVIALGKALNLRIIAEGVEQEIQATFLREKGCHEAQGYLYSK 1494 Query: 781 PLPAEEIPGWMSSV 794 PLP EEI + V Sbjct: 1495 PLPPEEITQLFAEV 1508 Score = 62.0 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 49/134 (36%), Gaps = 4/134 (2%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP 67 + + AL G+ + E +F++ E +WG K G + + P Sbjct: 952 RGKETHYRQALNLTNTGSWEFDLASEKVFWSEQVEIIWGMKPGTFRGE--FDQVKAGIHP 1009 Query: 68 AHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALS-KVSAEGKVYYL-ALVRDA 125 + + N + + + E ++ DGS W + + + ++G L L+ D Sbjct: 1010 QDFDLWQQNVQACIEEGKEHNLEFRVVHPDGSIHWVQAIGNAEYDSQGHPIRLRGLIMDV 1069 Query: 126 SVEMAQKEQTRQLI 139 + +E+ + Sbjct: 1070 TERKTSQERLNYMA 1083 >UniRef50_A8VRH4 Putative uncharacterized protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRH4_9BACI Length = 815 Score = 726 bits (1875), Expect = 0.0, Method: Composition-based stats. Identities = 204/789 (25%), Positives = 344/789 (43%), Gaps = 48/789 (6%) Query: 35 MFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLE 94 +F N AA G+ +E ++ N L+ + E + ++ + E Sbjct: 39 IFVNDAATSHVGWPKEVLLTMNPYDLVDPGYHGTYTEELIRLQD-----HSTLLLESVHR 93 Query: 95 KKDGSKIWTRFALSKVSA---EGKVYYLALVRD----ASVEMAQKEQTRQLIIAVDHLDR 147 KDG+KI S V+ GK + L++VRD +S +M + +++ H Sbjct: 94 TKDGTKIPVEINSSLVTLTDEHGKSFILSVVRDLSGRSSNQMLHERTSKEFESLYLHNPD 153 Query: 148 PVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTAR 207 + DP + N A + Y E + D +L++ K Sbjct: 154 LIFSTDPLGNFTNMNPACSATLEYSKQELMKLPYDEILDVAHINKTVDQ--FSKALKGQT 211 Query: 208 DQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEE-------RQIRQLEGN 260 + T++G + + + P+ V ++ ++ DIT + + Q + Sbjct: 212 VTFTATVRTKSGRPVDLNITSLPIL-VEDQVEGVISIARDITAQNITENLLIESEQRYKS 270 Query: 261 ILA-AMCSSPPFHEMGEIICRNI----------ESVLNESHVSLFALRNGMPIHWASSSH 309 I + + + GE+ N ++ E S P H + Sbjct: 271 IFQYNVDAVTTLNTAGELYYSNPAAEQLFGCDRSELIKEPFSSFIIAEEREPFHEKMTMT 330 Query: 310 GAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSR 369 + + T + + + I T E + DI+ E ++S Sbjct: 331 LEGTPHQHETAITNTRGEKRYVHLTLIPTFINKEVTGVHCIAKDIT--------ESKQSE 382 Query: 370 QHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA----VSPVVYLIGVDHIQDVIDSLGYAW 425 + I L D +T LPN+ L+ L+ ++ ++ I +D + + D LGY Sbjct: 383 EKISFLAYHDTLTTLPNQYKFQQDLNTLIARSSIKPKPFSIFTIDLDRFKFINDYLGYDL 442 Query: 426 ADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMID 485 ++ L +V R E L D L R G +F ++ L+ Q+ +++ + +S I Sbjct: 443 GNELLTKVGTRISELLSEDAKLYRYGGDEFTIIHLDATPEESLQLGNKIASAISMAFDIS 502 Query: 486 DKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLV 543 +T+SIGIS+ D GK+ + L+ + NAM + +K G N Q F+ +N + + L Sbjct: 503 GFDAFITVSIGISHHPDHGKDLNTLIKKSDNAMYFAKKMGRNNVQMFNEEINTLSTKNLK 562 Query: 544 LGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGE 603 L + L +A+ ++ L YQPQ A+T + G+EAL RW + G + P+ FIPLAEE G Sbjct: 563 LESLLYKALERDEFLLHYQPQYDAKTNRISGVEALIRWDNEELGMISPADFIPLAEETGL 622 Query: 604 IENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQ 663 I IG WV+ AC Q W+ + + +SVNLS F LP + + G+ Sbjct: 623 IVPIGEWVMRTACHQNKAWQDEGLPPMVMSVNLSIRQFYQPDLPQVIGKILEESGMAPEL 682 Query: 664 LTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSF 723 L +EITESM M H ++ L+ +GV +++DDFGTGFS L+ L P+ +KID+SF Sbjct: 683 LELEITESMAM-HADSAISILKQLKQLGVRIAIDDFGTGFSSLNHLKKFPLDHLKIDRSF 741 Query: 724 VDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLP 783 VD +++ I + +LNL VVAEGVE Q + L+ C V QG+ FS+P+ Sbjct: 742 VDDICLGSEEQDIVKTIIMLAHNLNLRVVAEGVENDLQQQFLKDHRCDVFQGFHFSKPVI 801 Query: 784 AEEIPGWMS 792 + IP + Sbjct: 802 RDAIPELLR 810 Score = 85.5 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 93/279 (33%), Gaps = 19/279 (6%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 F N + NPA Y ++E++ D ++ + + Sbjct: 144 FESLYLHNPDLIFSTDPLGNFTNMNPACSATLEYSKQELMKLPYDEIL---DVAHINKTV 200 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV-YYLALVRDASVEMAQK 132 + K + + ++ K G + + E +V +++ RD + + + Sbjct: 201 DQFSKALKGQTVTFTATVR--TKSGRPVDLNITSLPILVEDQVEGVISIARDITAQNITE 258 Query: 133 ----EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 E ++ + V L+ + N A ++FG SE + + Sbjct: 259 NLLIESEQRYKSIFQYNVDAVTTLNTAGELYYSNPAAEQLFGCDRSELIKEPFSSFIIAE 318 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 E + L + Q E + GEK ++ ++ P + + + + DI Sbjct: 319 EREPFHEKMTMTL--EGTPHQHETAITNTRGEKRYVHLTLIPTF-INKEVTGVHCIAKDI 375 Query: 249 TEERQIRQLE-----GNILAAMCSSPPF-HEMGEIICRN 281 TE +Q + + L + + F ++ +I R+ Sbjct: 376 TESKQSEEKISFLAYHDTLTTLPNQYKFQQDLNTLIARS 414 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 48/132 (36%), Gaps = 6/132 (4%) Query: 9 AADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPA 68 ++ + + N+ +N E+ + NPAAE+L+G R E+I I + R Sbjct: 263 ESEQRYKSIFQYNVDAVTTLNTAGELYYSNPAAEQLFGCDRSELIKEPFSSFIIAEEREP 322 Query: 69 HPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV-YYLALVRDASV 127 E + EG + E + G K + L +V + +D + Sbjct: 323 FHEKMTMTLEGTPHQHETAITNTR-----GEKRYVHLTLIPTFINKEVTGVHCIAKDITE 377 Query: 128 EMAQKEQTRQLI 139 +E+ L Sbjct: 378 SKQSEEKISFLA 389 Score = 51.2 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 43/282 (15%), Positives = 92/282 (32%), Gaps = 35/282 (12%) Query: 132 KEQTRQLIIAVDHLDRPVIVLDPE-----RHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 + QL ++ + PV + + + N A T G+ M P L++ Sbjct: 7 ELSKTQLNTVLNMISDPVFITEINKSFEPLTFIFVNDAATSHVGWPKEVLLTMNPYDLVD 66 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV--YDVLAHLQNLVMT 244 ++ L + E + T+ G KI ++ + S V D ++ Sbjct: 67 PGYHGTYTEELIR--LQDHSTLLLESVHRTKDGTKIPVEINSSLVTLTDEHGK-SFILSV 123 Query: 245 FSDITEE-----------RQIRQLEGNILAAMCSSPPFHEMGEI-------ICRNIESVL 286 D++ ++ L + + S+ P + + + + ++ Sbjct: 124 VRDLSGRSSNQMLHERTSKEFESLYLHNPDLIFSTDPLGNFTNMNPACSATLEYSKQELM 183 Query: 287 NESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAP--AGILQIKTSSGAET 344 + + + + S A +++AT+R + G P I + + Sbjct: 184 KLPYDEILDVAHINKTVDQFSK--ALKGQTVTFTATVRTKSGRPVDLNITSLPILVEDQV 241 Query: 345 SAFIERVADISQHMAALALEQEKSRQHIEQLIQF--DPMTGL 384 I DI+ L E S Q + + Q+ D +T L Sbjct: 242 EGVISIARDITAQNITENLLIE-SEQRYKSIFQYNVDAVTTL 282 >UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3JAR2_NITOC Length = 944 Score = 726 bits (1874), Expect = 0.0, Method: Composition-based stats. Identities = 166/574 (28%), Positives = 270/574 (47%), Gaps = 33/574 (5%) Query: 233 DVLAHLQNLVMTFSDITEERQIRQLEGNILAA--MCSSPPFHEMGEIICRNIESVLNESH 290 + + L+ F E I + ++ + EI+ R H Sbjct: 383 NAESRLRLTAKVFESTVEGVIITDTKAYVVDVNEAFTHITGIARSEIMGR---------H 433 Query: 291 VSLFALRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQIKT---SSGAETS 345 +S + PI + H I++ W + ++++G + +S E + Sbjct: 434 LSTLQTKQEKPISFQRVRH--AIKSTGQWQGELWSQRKNGEIYPLWVTANAVRNSKEEIT 491 Query: 346 AFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP- 404 F+ +DI+ ++++ Q + L D +TGLPNR+ + L+ + A Sbjct: 492 HFVAIFSDITL--------RKQTEQRLYYLAHHDALTGLPNRSLFLDRLEHAIHHAQRHH 543 Query: 405 ---VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSL 460 V I +D + + D+LG+ D L +V R R ++ + + R+ G +F V++ Sbjct: 544 HRIAVLFIDLDRFKFINDTLGHPIGDILLKQVAERMRLNIRAEDTIARLGGDEFTVIIEN 603 Query: 461 ENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDY 518 D S I+ I ++ + KP I ++ SIG+S + G LL A AM Sbjct: 604 FTDTSAISLITQKIISACEKPFNIKGNELFVSASIGVSLYPEDGHEASMLLQRADAAMYQ 663 Query: 519 IRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEAL 578 +K G + QFF+ +N E+L L L+ A++ + +L YQP I E+G + +EAL Sbjct: 664 AKKRGKSCCQFFTTEINTAATEQLALKNLLRRALARKEFQLYYQPIINMESGAIVSVEAL 723 Query: 579 ARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSA 638 RW DP G + P+ FIPLAEE G I +G WV+ AC Q W N + +++NLSA Sbjct: 724 IRWVDPELGLISPNTFIPLAEENGLILPLGEWVLQTACTQAKIWNQSNPYPVRIAINLSA 783 Query: 639 LHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDD 698 +VS+ + L +E+TESM++ K + L+ MG LS+DD Sbjct: 784 RQLEQTDFSERVSEILKKTPFPTDHLELELTESMLINRMESSLKTLNTLKKMGCRLSLDD 843 Query: 699 FGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVET 758 FGTG+S L+ L P+ +KID+SFV + A+ A+T++ SL V+A+GVET Sbjct: 844 FGTGYSPLAYLKRFPIDTVKIDRSFVQGISIDPDDAAITTAVTTMAHSLKRAVIAKGVET 903 Query: 759 KEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 +EQ L +I QGYF S P+PAEE+ + Sbjct: 904 REQLNFLNEIKVDEAQGYFISYPVPAEELTQKLR 937 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 50/241 (20%), Positives = 81/241 (33%), Gaps = 16/241 (6%) Query: 123 RDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPD 182 + + + R + VI+ D + ++V N AFT + G SE G Sbjct: 376 HNDQRRKNAESRLRLTAKVFESTVEGVIITDTKAYVVDVNEAFTHITGIARSEIMGRHLS 435 Query: 183 TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 TL E P R++ + T + Q E + GE + + + V + + + V Sbjct: 436 TLQTKQEKPISF-QRVRHAIKSTGQWQGELWSQRKNGEIYPLWVTANAVRNSKEEITHFV 494 Query: 243 MTFSDITEERQIRQLEGNI--LAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGM 300 FSDIT +Q Q + A+ P + + I H + Sbjct: 495 AIFSDITLRKQTEQRLYYLAHHDALTGLPNRSLFLDRLEHAIHHAQRHHHRIAVLFIDLD 554 Query: 301 PIHWASSSHGAEI------QNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADI 354 + + + G I Q A+ IR D I G E + IE D Sbjct: 555 RFKFINDTLGHPIGDILLKQVAERMRLNIRAED-------TIARLGGDEFTVIIENFTDT 607 Query: 355 S 355 S Sbjct: 608 S 608 Score = 69.7 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 60/147 (40%), Gaps = 8/147 (5%) Query: 18 LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNR 77 E + G ++ + V+ N A + G R E++G ++ L + +P + +RH Sbjct: 395 FESTVEGVIITDTKAYVVDVNEAFTHITGIARSEIMGRHLSTLQTKQEKPISFQRVRHAI 454 Query: 78 EGGKARVEGMSRELQLEKKDGSK--IWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQT 135 + EL ++K+G +W + S E +++A+ D ++ +++ Sbjct: 455 KSTGQ----WQGELWSQRKNGEIYPLWVTANAVRNSKEEITHFVAIFSDITLRKQTEQRL 510 Query: 136 RQL--IIAVDHLDRPVIVLDPERHIVQ 160 L A+ L + LD H + Sbjct: 511 YYLAHHDALTGLPNRSLFLDRLEHAIH 537 >UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YAT8_NITMU Length = 705 Score = 726 bits (1874), Expect = 0.0, Method: Composition-based stats. Identities = 183/713 (25%), Positives = 322/713 (45%), Gaps = 46/713 (6%) Query: 116 VYYLALVRDASVEMAQKEQTRQLIIA-------VDHLDRPVIVLDPERHIVQCNRAFTEM 168 + A+ A +E+T + + V+ ++V D ++ N+ + EM Sbjct: 4 PAFFAVFNSKETRKALEEKTAEFSRSLSLCKATVELTAEGLLVTDRVGRVLYHNQFYLEM 63 Query: 169 FGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWK--TARDQDEFLLLTRTGEKIWIKA 226 + M ++ R + A + LL +I+ + Sbjct: 64 WPIPEEFMDNMSHQAIVQYGSSQLKEPQRFLHATEEIYHAWPPESLDLLQFNDCRIFERY 123 Query: 227 SISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIIC------R 280 + + V + ++ V + +ITE R+ + + A + SS + ++ Sbjct: 124 TKAKVLEGQNMVR--VWSLRNITERREADAYKAQLAAIVESSNDAIIVQDLNGIITSWNA 181 Query: 281 NIESVLNESHVSLFALRNGMPIHWASSSHGAEI------------QNAQSWSATIRQRDG 328 E + + + I +I W R+ Sbjct: 182 GAEGLFGYRASEVIGSSVEILIPPDLREEEGDIMCLIKSGRRADHFETVRW-GKGRKPID 240 Query: 329 APAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRN 388 I +K +G A + V DI+Q +++S++ IE L +D +TGLPNR Sbjct: 241 VSVTISAMKDRAGNIIGA-SKIVRDITQ--------RKESQERIEYLAHYDSLTGLPNRT 291 Query: 389 NLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPD 444 L + L ++ A + + +D + V DSLG+ D+ L V R + ++ Sbjct: 292 LLSDRLRIAIENARRYSIRLALLFVDIDRFKLVNDSLGHEIGDKLLKAVAQRMQSTVRQA 351 Query: 445 QYLCRIEGTQFVLVS-LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DL 501 + R+ G +FV++ ++ + A++L +S+P I++ LT SIGIS D Sbjct: 352 DTVSRVGGDEFVVLLSRIETATDAARSAEKLITSISQPYQIEEHELLLTASIGISIYPDN 411 Query: 502 GKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVY 561 GK+ L A AM + G N +QF+S + ERL L L+ A+S +++ +Y Sbjct: 412 GKDASSLTRNADAAMYSAKGQGRNRYQFYSEDLTYAAAERLRLEHDLRGALSRDEIFPLY 471 Query: 562 QPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAE 621 QPQI TG + G+EAL RW+ G + P+ FIP+AE+ G I +G +++ +AC Q + Sbjct: 472 QPQIELATGRVIGVEALMRWNRAGQGLISPASFIPVAEDSGLILALGEYILRKACLQARQ 531 Query: 622 WRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIF 681 W ++VN+SA+ FR N + V + G L +E+TES++M+ + Sbjct: 532 WHEHQGFQGTIAVNVSAVQFRQNDFTDVVLRVLSETGFPPECLELEVTESVVMQGLESVV 591 Query: 682 KRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAIT 741 +++ IL G+ L++DDFGTG+S LS L + +KID+SFV + A++ AI Sbjct: 592 QKMGILESHGIKLAIDDFGTGYSSLSYLRQFAIDRLKIDQSFVRDLPGDADAQAIIRAIV 651 Query: 742 SIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 ++G+SL L V+AEGVET+ Q L+ I C QGY ++RP+ + + W+ + Sbjct: 652 AMGRSLGLRVMAEGVETEAQARFLQDIECTESQGYLYARPMKSNDFEAWLKTR 704 Score = 105 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 53/321 (16%), Positives = 115/321 (35%), Gaps = 12/321 (3%) Query: 16 PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRH 75 +E G ++ + V++ N ++W E + + ++ + + + Sbjct: 35 ATVELTAEGLLVTDRVGRVLYHNQFYLEMWPIPEEFMDNMSHQAIV--QYGSSQLKEPQR 92 Query: 76 NREGGKARVEGMSRE-LQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQ 134 + E L L + + +I+ R+ +KV + + +R+ + Sbjct: 93 FLHATEEIYHAWPPESLDLLQFNDCRIFERYTKAKVLEGQNMVRVWSLRNITERREADAY 152 Query: 135 TRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADN 194 QL V+ + +IV D I N +FGY SE G + L+ P+ + Sbjct: 153 KAQLAAIVESSNDAIIVQDLNGIITSWNAGAEGLFGYRASEVIGSSVEILIP-PDLREEE 211 Query: 195 RIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQI 254 + + D E + + + I + +IS + D ++ DIT+ ++ Sbjct: 212 GDIMCLIKSGRRADHFETVRWGKGRKPIDVSVTISAMKDRAGNIIGASKIVRDITQRKES 271 Query: 255 RQLEGNI--LAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAE 312 ++ + ++ P + + + IE+ S + + S G E Sbjct: 272 QERIEYLAHYDSLTGLPNRTLLSDRLRIAIENARRYSIRLALLFVDIDRFKLVNDSLGHE 331 Query: 313 IQN------AQSWSATIRQRD 327 I + AQ +T+RQ D Sbjct: 332 IGDKLLKAVAQRMQSTVRQAD 352 Score = 75.5 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 98/256 (38%), Gaps = 12/256 (4%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 +E + ++ + N + +N AE L+GY+ EVIG+++++LIP DLR + + Sbjct: 156 LAAIVESSNDAIIVQDLNGIITSWNAGAEGLFGYRASEVIGSSVEILIPPDLREEEGDIM 215 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYYLALVRDASVEMAQ 131 + G +A E K I +S + A + +VRD + Sbjct: 216 CLIKSGRRAD----HFETVRWGKGRKPIDVSVTISAMKDRAGNIIGASKIVRDITQRKES 271 Query: 132 KEQTRQLIIA--VDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE 189 +E+ L + L ++ D R ++ R ++ + + E Sbjct: 272 QERIEYLAHYDSLTGLPNRTLLSDRLRIAIENARRYSIRLALLFVDIDRFKLVNDSLGHE 331 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 + Q + T R D ++R G ++ +S + ++ + I+ Sbjct: 332 IGDKLLKAVAQRMQSTVRQADT---VSRVGGDEFV-VLLSRIETATDAARSAEKLITSIS 387 Query: 250 EERQIRQLEGNILAAM 265 + QI + E + A++ Sbjct: 388 QPYQIEEHELLLTASI 403 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 725 bits (1873), Expect = 0.0, Method: Composition-based stats. Identities = 186/643 (28%), Positives = 294/643 (45%), Gaps = 47/643 (7%) Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIK--ASISPVYDVLAHLQNLVMTFSD 247 R +++ + L L GE + S+ P ++ L D Sbjct: 445 HRHPQLQRWRRIAAERGFKAAAALPLRSDGETYGVLCLVSVDPQAFDADEVELLAELADD 504 Query: 248 I------------------TEERQIRQLEGNILAAMCSSPPFHEMGEIICRNI--ESVLN 287 I T E + R +E + A + S II N Sbjct: 505 IAFGIRTLRARVEQQQLAATLELRNRAIEESTNAIVISHADRAADNPIIYVNPAFTVTTG 564 Query: 288 ESHVSLFALRNGMPIH-----WASSSHGAEIQNAQSWSATIR--QRDGAPAG---ILQIK 337 + I A ++ T+R +DG L Sbjct: 565 YGADEVLGRNARFLIDNDWDQPAVERLREAVREGGDARVTLRTYHKDGQLLWNEISLASI 624 Query: 338 TSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDL 397 + E S FI D++ E+ + +EQ D +TGL NRN L++ + Sbjct: 625 RDAQGEVSHFIAIFNDVT--------ERVRYEAELEQQATHDALTGLANRNLLNDRMQRA 676 Query: 398 VDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGT 453 + +A V L+ +D + + DSLG+A D L E R ++ + R+ G Sbjct: 677 IIRAARDGHAVAVMLLDLDRFKLINDSLGHAAGDALLQETARRLSASVRRGDTVARLGGD 736 Query: 454 QFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLS 510 +F++V + + +A ++ +++P++++ + T SIG+S G+ LL Sbjct: 737 EFMVVMSDMSAEDAAAALAAKVLESLAEPMLLNGREIVATGSIGVSLYPRDGEAAATLLK 796 Query: 511 TAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETG 570 A AM ++ G N +QF++P MNE + ERL L +L+ A+ N++L+L YQP++ G Sbjct: 797 HADVAMYRAKELGRNRFQFYAPEMNERILERLELENSLRRALENDELELHYQPKVSLRDG 856 Query: 571 ELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIP 630 + G EAL RW P G V P+ FIPLAEE G I IG WV+ ACRQL W + Sbjct: 857 RVIGAEALIRWRHPQLGMVSPADFIPLAEETGLIVPIGEWVVDHACRQLRAWLDAGLPQI 916 Query: 631 ALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDM 690 +++VN+SA F+ QL + ++ A+ A + QL VE+TES +M ++ L+++ Sbjct: 917 SVAVNVSARQFQHEQLTHVLARALAAHRLPPGQLHVEVTESAVMCEPERTIFTLRELKNI 976 Query: 691 GVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLT 750 GV +S+DDFGTG+ L+ L P+ IKID+ FV T A+ I S+ SLN T Sbjct: 977 GVRISLDDFGTGYCSLNYLKRFPIDSIKIDRCFVTDLATSAEDAAIALMIVSLAHSLNQT 1036 Query: 751 VVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 V+AEGVE + Q + LR+ C +QG+ FSRPLPA E +++ Sbjct: 1037 VIAEGVENEAQLDFLRRHGCDEMQGFLFSRPLPAAEFARLLAA 1079 Score = 93.6 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 94/279 (33%), Gaps = 15/279 (5%) Query: 63 RDLRPAHPEYIRHNREGGKARVEG-MSRELQLEKKDGSKIWT-RFALSKVSAEGKVYYLA 120 + R E R +G L L D L A+ + + Sbjct: 451 QRWRRIAAERGFKAAAALPLRSDGETYGVLCLVSVDPQAFDADEVELLAELADDIAFGIR 510 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERH----IVQCNRAFTEMFGYCISEA 176 +R + A++ +++ +R I+ N AFT GY E Sbjct: 511 TLRARVEQQQLAATLELRNRAIEESTNAIVISHADRAADNPIIYVNPAFTVTTGYGADEV 570 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 G L++ ++ RL++ + + + + G+ +W + S++ + D Sbjct: 571 LGRNARFLID-NDWDQPAVERLREAVREGGDARVTLRTYHKDGQLLWNEISLASIRDAQG 629 Query: 237 HLQNLVMTFSDITEER--QIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLF 294 + + + F+D+TE + + A+ + + + + R I + H Sbjct: 630 EVSHFIAIFNDVTERVRYEAELEQQATHDALTGLANRNLLNDRMQRAIIRAARDGHAVAV 689 Query: 295 ALRNGMPIHWASSSHGAEI------QNAQSWSATIRQRD 327 L + + S G + A+ SA++R+ D Sbjct: 690 MLLDLDRFKLINDSLGHAAGDALLQETARRLSASVRRGD 728 Score = 79.3 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 48/209 (22%), Positives = 85/209 (40%), Gaps = 31/209 (14%) Query: 16 PALEQNMMGAVLINEN----DEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPE 71 A+E++ V+ + + + +++ NPA GY +EV+G N LI D E Sbjct: 530 RAIEESTNAIVISHADRAADNPIIYVNPAFTVTTGYGADEVLGRNARFLIDNDWDQPAVE 589 Query: 72 YIRHN-REGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKV-YYLALVRDASVE 128 +R REGG ARV L+ KDG +W +L+ + A+G+V +++A+ D + Sbjct: 590 RLREAVREGGDARV-----TLRTYHKDGQLLWNEISLASIRDAQGEVSHFIAIFNDVTER 644 Query: 129 MAQKEQTRQLI------------IAVDHLDRPVIVLDPERHIVQC----NRAFTEM---F 169 + + + Q + D + R +I + H V F + Sbjct: 645 VRYEAELEQQATHDALTGLANRNLLNDRMQRAIIRAARDGHAVAVMLLDLDRFKLINDSL 704 Query: 170 GYCISEASGMQPDTLLNIPEFPADNRIRL 198 G+ +A + L+ D RL Sbjct: 705 GHAAGDALLQETARRLSASVRRGDTVARL 733 >UniRef50_A1SSA6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SSA6_PSYIN Length = 980 Score = 725 bits (1872), Expect = 0.0, Method: Composition-based stats. Identities = 171/694 (24%), Positives = 314/694 (45%), Gaps = 39/694 (5%) Query: 127 VEMAQKEQTRQLIIAVDHLDRPVIVLDPER-HIVQCNRAFTEMFGYCISEASGMQPDTLL 185 + +E+ R L ++++ + + D + N++ ++FG+ G Sbjct: 289 AKTQLREKKRLLDDIIENIPTAIFLKDVNNLRLSLINKSTEKLFGHSRETILGQSDYDFF 348 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 + + + +T + E ++ T G + I + D + + L+ Sbjct: 349 PKEQADFFTNKDRETIERRTLLEIPEEIIDTPFGSRTLYTKKII-ITDEHNNPKFLLGIS 407 Query: 246 SDITEERQIRQLEGNILAAMCSSPPFHEMGEIIC--RNIESVLNESHVSLFALRNGMPI- 302 DITE ++ ++ S +G + R+ + +E +L + Sbjct: 408 EDITERNAAKKALEESEHSLRESQRIARLGSYLFDLRSNQWSGSEILDNLLGIDADYQRT 467 Query: 303 --HWASSSHGAEIQNAQSWSAT---------------IRQRDGAPAGIL---QIKTSSGA 342 WA H + + RQ D A + +++ + Sbjct: 468 MEGWAQLIHPDDRSRIDHYFKEDVLNQKKSFNQEYRMKRQNDQAVRWVHGLGELEFDNQG 527 Query: 343 ETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLD----DLV 398 + DI+ E++ + H++ L FD +TGLPNR L + + Sbjct: 528 SPILMKGTIQDIT--------ERKLAEAHLQALANFDQLTGLPNRFMLKDKITYLFTLAR 579 Query: 399 DKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV 458 S + + +DH ++V D+LG+ D+ L+E+ R + ++ + RI +F+L+ Sbjct: 580 RNNESLTMMFLDLDHFKNVNDTLGHVIGDRLLIEIAKRLKSAIREVDLVSRIGSDEFILL 639 Query: 459 SLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAM 516 D + IA +L VS P + + +T +IGI+ + G+ + L+ A AM Sbjct: 640 FPNTDADSALNIATKLIETVSLPTVFEHHELFITATIGIAIYPNDGEEFETLIKNADTAM 699 Query: 517 DYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIE 576 ++ N + FF+ M ++ +L + A++ A+ N++++ YQPQI A G + G E Sbjct: 700 SQAKRYSRNTFHFFTEEMQVHLQRKLKIVNAMRHALLRNEMQVHYQPQISAVKGHIIGAE 759 Query: 577 ALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNL 636 AL RW P G + P FIP+AE G+I IG WV+ A Q+ W+++ + ++VNL Sbjct: 760 ALLRWRHPELGDISPGEFIPIAESSGQIVAIGEWVLRTAIDQMKVWQNEGLAPMVVAVNL 819 Query: 637 SALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSV 696 SAL F+ L + ++ + L +E+TE++ M+ + + L G+ +S+ Sbjct: 820 SALQFKQANLIGMIISMLNKAQLAHQYLELELTEAITMDDPQQAINIMNQLHAKGIRMSI 879 Query: 697 DDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGV 756 DDFGTG+S LS L V ++KID+SF+ + A++ AI + ++L + +AEGV Sbjct: 880 DDFGTGYSSLSYLKQFKVYKLKIDQSFICNLARDSDDRAMVHAIIDMAKNLGMQTIAEGV 939 Query: 757 ETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 ET EQ E LR C IQGY+FS+ +PA+E + Sbjct: 940 ETAEQLEFLRLHGCNEIQGYYFSKAIPADEFSRF 973 Score = 64.3 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 36/264 (13%), Positives = 86/264 (32%), Gaps = 11/264 (4%) Query: 8 NAADGIFFPALEQNMMGAVLINEND-EVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 + +E L + N+ + N + EKL+G+ RE ++G + P++ Sbjct: 294 REKKRLLDDIIENIPTAIFLKDVNNLRLSLINKSTEKLFGHSRETILGQSDYDFFPKEQA 353 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGS-KIWTRFALSKVSAEGKVYYLALVRDA 125 + +RE + R E ++ GS ++T+ + + L + D Sbjct: 354 DF---FTNKDRETIERRTLLEIPEEIIDTPFGSRTLYTKKIIITDEHNNPKFLLGISEDI 410 Query: 126 SVEMAQKEQTRQLIIAVDHLDR----PVIVLDPERHIVQCNRAFTEMFGYCIS-EASGMQ 180 + A K+ + ++ R + D + + + G + + Sbjct: 411 TERNAAKKALEESEHSLRESQRIARLGSYLFDLRSNQWSGSEILDNLLGIDADYQRTMEG 470 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTR-TGEKIWIKASISPVYDVLAHLQ 239 L++ + + + +L + E+ + + W+ +D Sbjct: 471 WAQLIHPDDRSRIDHYFKEDVLNQKKSFNQEYRMKRQNDQAVRWVHGLGELEFDNQGSPI 530 Query: 240 NLVMTFSDITEERQIRQLEGNILA 263 + T DITE + + Sbjct: 531 LMKGTIQDITERKLAEAHLQALAN 554 >UniRef50_B1Y6A9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y6A9_LEPCP Length = 898 Score = 725 bits (1872), Expect = 0.0, Method: Composition-based stats. Identities = 203/838 (24%), Positives = 342/838 (40%), Gaps = 57/838 (6%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 + A ++ + ++ + N + E G+++D+L+ Sbjct: 72 EQALSAFAQRVMDTVGGVVIALDPQGRLRQRNRHCQNDLAPLPE---GSSVDLLLHPQDL 128 Query: 67 PAHPEYIRHNREGGKA-------RVEGMSRELQLEKKDGSKIW--TRFALSKVSAEGKVY 117 A + H + R G E Q +DGS + A+ + + Sbjct: 129 AALEAALPHLPWQVHSVLFETVRRQGGYRAEHQFAMRDGSYRYHLVEAAMLYSAQNKEEG 188 Query: 118 YLALVRDASVEMAQKEQTRQLIIAVDHLD----RPVIVLDPERHIVQCNRAFTEMFG--- 170 + D S Q++ R + + L P + + +F Sbjct: 189 AVLSGTDISELKRQEQHLRASDARFNQAEHVARVGSWDLVPHTGAMTWSVEMARIFDITA 248 Query: 171 --YCISEASG----MQPDTLLNI-PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIW 223 + +A+G Q D L + P+ A + EF ++T G+ W Sbjct: 249 QPHASHDAAGASVYSQADFLAAVHPDERARVVAAQAAASAEHRPCDIEFRIVTSGGKMKW 308 Query: 224 IKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ 277 + + + V T DITE RQ + +S + + Sbjct: 309 VHLRSTTFHGDDGRPLRSVGTVQDITERRQAEDEMRLAASVFDNSLNAILIADANGRIRK 368 Query: 278 ICRNIESVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATIRQ--RDGAP 330 + R ++ + +++G+ AE+Q W + +DG Sbjct: 369 VNRAFTAITGYTAEEAVGDTPRLMKSGLHSPGFYGEMWAELQACGKWDGELMNQCKDGRI 428 Query: 331 AGI---LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNR 387 + + + +I DI+ EQ+ S Q I QL +D +TGLPNR Sbjct: 429 ISVRESIAAVHDPAGAVAYYIGIFHDIT--------EQKASAQRIHQLAYYDVLTGLPNR 480 Query: 388 NNLHNYLDDLVDKA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKP 443 L + + +A V + +D + + DSLG+ D L V R + L+ Sbjct: 481 ALLMDRCQHELARAMRDGKRLAVLFLDLDRFKHINDSLGHPVGDGLLRAVAQRLQGTLRD 540 Query: 444 DQYLCRIEGTQFVLVSLENDVSN-ITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--D 500 + R+ G +F+++ + S + A + + P +++ + S+GIS D Sbjct: 541 SDTIARLGGDEFIVLLEHVETSAGVELAARRILDAFRDPFQLEEHRLSVGASVGISLFPD 600 Query: 501 LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLV 560 + L A A+ + G ++FF P N+ K+R+ L L++A+ NQL L Sbjct: 601 HASDITSLFKYADLALYQAKAAGRGDFRFFEPRFNDAAKDRMRLERELRQALERNQLSLQ 660 Query: 561 YQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLA 620 YQP G L G EAL RW P G V P+ FIP+AE+ G I IG WV+ +ACRQ Sbjct: 661 YQPVFALPDGRLAGAEALLRWTHPALGSVSPATFIPIAEDSGLIVPIGAWVLEQACRQAR 720 Query: 621 EWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEI 680 +W + ++VNLS + + N L + VS + G+ L +EI+ES + H Sbjct: 721 QWLDAGLDPGVIAVNLSGMQIQRNDLVDTVSSVLARTGLPACHLELEISESYITRHAESD 780 Query: 681 FKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAI 740 +R+ LR +GV +++DDFGTG + L L LPV+++KID+SF+ + A+ AI Sbjct: 781 LQRLGQLRALGVSMAIDDFGTGQTSLGHLRRLPVSKLKIDRSFMADIEHDAAAAAVTRAI 840 Query: 741 TSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLK 798 +G L LTVVAEGVE+ Q L HC ++QG+ ++RPL A + PL+ Sbjct: 841 IGLGHGLGLTVVAEGVESAAQESALVAQHCDLVQGFRYARPLDAPVFAALCARPQPLR 898 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 725 bits (1872), Expect = 0.0, Method: Composition-based stats. Identities = 167/624 (26%), Positives = 285/624 (45%), Gaps = 36/624 (5%) Query: 197 RLQQLLWKTARDQDEFLLLTRTGE---KIWIKASISPVYDVLAHLQNLVMTFSDITEERQ 253 +L + L++ T+ GE + +++ +++ + L T DI+ RQ Sbjct: 12 QLAEALFRHPGGAYPLTFETQDGEGESERYLEVTVNQL--NYQGDAYLCATARDISGRRQ 69 Query: 254 IRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNESHVSLFALRNGMPIHWASS 307 + SS + + + R + + + M Sbjct: 70 TERQLRLAAQVFESSNEAILISDPDNRILTVNRAFGHITGYGEAEVRGSKASMLFSDRHE 129 Query: 308 -----SHGAEIQNAQSWSATI--RQRDGAPAGI---LQIKTSSGAETSAFIERVADISQH 357 +Q WS I R++ G + + E S F+ DIS Sbjct: 130 PAFFQQMWQTLQQRGQWSGEIWNRRKSGEHFPCWVNISVLQDGQGEISHFVALFTDIS-- 187 Query: 358 MAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV----SPVVYLIGVDH 413 E+++ ++ + ++D +T LPNR +++ L + +A V + +DH Sbjct: 188 ------ERKEQEARVQHMAEYDALTDLPNRVLVNDRLHQAIRQAELQHNQLAVLFVDLDH 241 Query: 414 IQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL-ENDVSNITQIAD 472 +++ D+LG+ D+ L EV R ++ + R G +FVL+ N QIA+ Sbjct: 242 FKNINDTLGHCAGDELLKEVARRLAGAVRGLDTVGRTGGDEFVLILPSINQPGEAAQIAE 301 Query: 473 ELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFF 530 + + +P I + + SIGIS D G + LL A AM + + +G N ++F+ Sbjct: 302 RILRTIQQPFQIGEHSLVVGCSIGISLMPDDGSDIQTLLMNADLAMYHAKAHGRNTFRFY 361 Query: 531 SPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVP 590 + MN V ERL++ L+ A+ QL LVYQPQ L G EAL RW DP G + Sbjct: 362 TREMNTQVAERLLMENRLRRAMEQEQLYLVYQPQYDMAGQRLLGCEALLRWRDPDEGLIM 421 Query: 591 PSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQV 650 P RFIP+AE+ G I +GRWV+ +ACRQ + W + ++VN+SA + + V Sbjct: 422 PGRFIPVAEDTGLIVPLGRWVLDQACRQASLWLRAGLEPMRVAVNVSAHQLMRHDFIDDV 481 Query: 651 SDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLV 710 +A+ + GH L +E+TES +M +++ +++ MGV L++DDFGTG+S L+ L Sbjct: 482 REALQRHALPGHCLELEVTESTLMADADLASRQLAVIKAMGVRLAIDDFGTGYSSLAYLK 541 Query: 711 SLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHC 770 +KID+SF+ ++ A++ AI + +L + +AEGVE + Q L+ + C Sbjct: 542 RFAPDLVKIDRSFISDLPGDEENAAIVSAIVHLAGALGMETLAEGVENENQQRFLQTLGC 601 Query: 771 RVIQGYFFSRPLPAEEIPGWMSSV 794 +QGY PL E + + Sbjct: 602 EAMQGYLLGSPLAEEMMTRRLEQQ 625 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 4/184 (2%) Query: 83 RVEGMSRELQLEKKDG---SKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLI 139 R G + L E +DG S+ + +++++ +G Y A RD S + Q R Sbjct: 19 RHPGGAYPLTFETQDGEGESERYLEVTVNQLNYQGDAYLCATARDISGRRQTERQLRLAA 78 Query: 140 IAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQ 199 + + +++ DP+ I+ NRAF + GY +E G + L + PA ++ Sbjct: 79 QVFESSNEAILISDPDNRILTVNRAFGHITGYGEAEVRGSKASMLFSDRHEPAFF-QQMW 137 Query: 200 QLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEG 259 Q L + + E ++GE +IS + D + + V F+DI+E ++ Sbjct: 138 QTLQQRGQWSGEIWNRRKSGEHFPCWVNISVLQDGQGEISHFVALFTDISERKEQEARVQ 197 Query: 260 NILA 263 ++ Sbjct: 198 HMAE 201 Score = 73.2 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 57/149 (38%), Gaps = 8/149 (5%) Query: 16 PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRH 75 E + ++ + ++ ++ N A + GY EV G+ ML PA + + Sbjct: 79 QVFESSNEAILISDPDNRILTVNRAFGHITGYGEAEVRGSKASMLFSDRHEPAFFQQMWQ 138 Query: 76 NREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYLALVRDASVEMAQKE 133 + + S E+ +K G W ++ + +++AL D S Q+ Sbjct: 139 TLQ----QRGQWSGEIWNRRKSGEHFPCWVNISVLQDGQGEISHFVALFTDISERKEQEA 194 Query: 134 QTRQLII--AVDHLDRPVIVLDPERHIVQ 160 + + + A+ L V+V D ++ Sbjct: 195 RVQHMAEYDALTDLPNRVLVNDRLHQAIR 223 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 724 bits (1871), Expect = 0.0, Method: Composition-based stats. Identities = 191/869 (21%), Positives = 353/869 (40%), Gaps = 106/869 (12%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP 67 ++ G + + + + + NPA ++ GY +E+ + L Sbjct: 382 QSSQEQVRLTFHSASAGIAMTSVDGQFLLVNPAFCEIVGYSEDELKKMHCRDLNDGRNEL 441 Query: 68 AHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYYLALVRDA 125 + + EG +++ E + K G +W R + S + + +V + Sbjct: 442 DAWKNRQWLLEG---KIDRSVVEKRYTTKSGRSVWVRISASLIKGPDGSPRNLIKVVENI 498 Query: 126 SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNR-----------------AFTEM 168 + Q+ + ++ + ++ D V AF Sbjct: 499 EQQKRQETLQVEQRHLLERIAAGAVLDDVLLATVTLLEEQYPDLMFSIMLLDKANAFARG 558 Query: 169 FGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLL------TRTG-EK 221 + + + L P + ++ A Q + L R G Sbjct: 559 IALRLPKRYLDKLKGLQIGPAAGSCGTAAYERRTVVVADIQQDLLWRNYRDLARRFGLRA 618 Query: 222 IWIKASISPVYDVLAHLQNLVMTFSD---ITEERQIR-------------QLEGNILAAM 265 W P+ + +S + E+R++ + + Sbjct: 619 CWSM----PILSSNQQVLGTFAVYSREVRVPEQREMELVSACSHIAGIAIERHHSEEQLK 674 Query: 266 CSSPPFHEMGEII------------------CRNIESVLNESHVSLFALRNGMPIHWASS 307 + +I+ + E ++ + + G + Sbjct: 675 LLETSIARLNDIVLIAEADSEGKQNPRIIFVNKAFERLMGYTAEEVLGKDPGFLDGPNTQ 734 Query: 308 SHG-----AEIQNAQSWSATI--RQRDGAPAG----ILQIKTSSGAETSAFIERVADISQ 356 A ++ +S + +++G IL I S+G + ++ DI+ Sbjct: 735 MEELWRVKALLKQGESVRTELVNYRKNGEEIWLEMDILPIANSAGV-FTHWVSVQRDIT- 792 Query: 357 HMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVD 412 E++ + I+ L +D +T LPNR L + L+ + ++ + + +D Sbjct: 793 -------ERKAAESRIQHLAFYDMLTNLPNRLLLLDRLEQALLNSMRLKRSGALLFLDLD 845 Query: 413 HIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE------NDVSN 466 + + + D+ G+ + D L +V R ++ + R+ G +FV+V N Sbjct: 846 NFKTLNDTHGHDFGDMLLEQVAQRLLNSVRITDTVARLGGDEFVVVVENLSEQGCNAAQE 905 Query: 467 ITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGK---NRDYLLSTAHNAMDYIRKNG 523 + +AD++ +S+P + + SIG++ + D LL A AM + G Sbjct: 906 ASLVADKILLALSQPFRLSGYEHYSSCSIGVALFCNEQQVTVDELLKRADLAMYEAKAAG 965 Query: 524 GNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHD 583 N ++FF PAM ++ +R + L++A+ ++++L YQPQ+ ++ G L G EAL RW Sbjct: 966 RNTFRFFDPAMQALITKRAAMEEDLRQALRRDEMRLYYQPQVDSQ-GSLLGAEALVRWEH 1024 Query: 584 PLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHI---PALSVNLSALH 640 P G + P+ FI LAEE G I IG WV+ AC QL W LSVN+SA Sbjct: 1025 PQQGLLSPAAFIELAEETGLILPIGEWVLRTACMQLVAW--AGRPETAGLVLSVNVSARQ 1082 Query: 641 FRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFG 700 + ++V + G + L +E+TES ++E+ E+ ++ IL+ MGVG S+DDFG Sbjct: 1083 LHQHDFIDRVFSILKETGANPQSLKLELTESTLVENIEEMITKMNILKAMGVGFSMDDFG 1142 Query: 701 TGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKE 760 TG+S L+ L LP++++KID+SFV L + ++++ I ++G L + VVAEGVE+ E Sbjct: 1143 TGYSSLAYLKRLPLSQLKIDRSFVRDVLVDSNDASIVQTIIALGHGLGIEVVAEGVESWE 1202 Query: 761 QFEMLRKIHCRVIQGYFFSRPLPAEEIPG 789 Q + L K C QGY F RP PAE++ Sbjct: 1203 QQQFLEKHGCLEYQGYLFGRPQPAEQLER 1231 Score = 98.6 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 47/327 (14%), Positives = 100/327 (30%), Gaps = 51/327 (15%) Query: 100 KIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIV 159 +W +V + + + + VEM + Q+ + + + + + Sbjct: 350 LLWNLQIRRRVRERTQALHEEVRQRRMVEMELQSSQEQVRLTFHSASAGIAMTSVDGQFL 409 Query: 160 QCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTG 219 N AF E+ GY E M L + + R L K R E T++G Sbjct: 410 LVNPAFCEIVGYSEDELKKMHCRDLNDGRNELDAWKNRQWLLEGKIDRSVVEKRYTTKSG 469 Query: 220 EKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQ---LEGNILAAMCSSPPFHEMGE 276 +W++ S S + +NL+ +I ++++ + ++L + + ++ Sbjct: 470 RSVWVRISASLIKGPDGSPRNLIKVVENIEQQKRQETLQVEQRHLLERIAAGAVLDDVLL 529 Query: 277 IICRNIESVLNESHVSLFALR---------------------NGMPIHWASSSHGAEIQN 315 +E + S+ L G+ I A+ S G Sbjct: 530 ATVTLLEEQYPDLMFSIMLLDKANAFARGIALRLPKRYLDKLKGLQIGPAAGSCGTAAYE 589 Query: 316 AQ---------------------------SWSATIRQRDGAPAGILQIKTSSGAETSAFI 348 + WS I + G + + Sbjct: 590 RRTVVVADIQQDLLWRNYRDLARRFGLRACWSMPILSSNQQVLGTFAVYSREVRVPEQRE 649 Query: 349 ERVADISQHMAALALEQEKSRQHIEQL 375 + H+A +A+E+ S + ++ L Sbjct: 650 MELVSACSHIAGIAIERHHSEEQLKLL 676 >UniRef50_B8GLY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GLY5_THISH Length = 1082 Score = 724 bits (1871), Expect = 0.0, Method: Composition-based stats. Identities = 185/718 (25%), Positives = 314/718 (43%), Gaps = 38/718 (5%) Query: 103 TRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCN 162 ++ + + + E Q+R+ ++ +D + LD + + N Sbjct: 362 VEMRTEHLNVANRSLQREVEQRRQAEAEVLAQSRRQAQVLEAVDEAIFGLDADCRVEFAN 421 Query: 163 RAFTEMFGYCISEASGMQPDTLLNIPEF------PADNRIRLQQLLWKTARDQDEFLLLT 216 A + G I + G + +L I + D + + + R + L Sbjct: 422 PAAEALAGCSIGQMRGQRLSGVLQIRDDQGRSAWEPDGDCLAEDPMPVSIRRAFDQTLYH 481 Query: 217 RTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE 276 R G + + + P+ ++ V + DIT ++I + ++ + + Sbjct: 482 RDGRVLVVDYAFRPIL-EGGQVRGGVFSCRDITGRKRIEESLRLHAQVFDTATEGVMIAD 540 Query: 277 I------ICRNIESVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI-- 323 + R E V S + L +G I+ WS I Sbjct: 541 ARGRILSVNRAFEQVTGYSAEEVVGRNPSILSSGRQDKAFYRRMWDTIKGEGIWSGEIWN 600 Query: 324 RQRDGAPAGILQIKTS---SGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDP 380 R++DG +S E S F+ +DI+ Q++S Q I+ L DP Sbjct: 601 RRKDGEIYPEWLTISSIAGPNGEASHFVAVFSDITA--------QKRSEQEIDFLANHDP 652 Query: 381 MTGLPNRNNLHNYLDDLVDKA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNR 436 +TGL NRN + L + A + L+ +D + + D +G+ D L E R Sbjct: 653 LTGLANRNLFEDRLAHAISMAGRNGQHVGLLLVDLDRFRLINDGMGHGPGDALLRETGRR 712 Query: 437 FREKLKPDQYLCRIEGTQF-VLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSI 495 ++ + R+ G +F +++ D ++ A+ + + P+ + + T+SI Sbjct: 713 LGHCVRDSDTVARLGGDEFGIILEGLADAADAGMQAERILEAMRAPLRLGGQELFCTVSI 772 Query: 496 GISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAIS 553 GI+ G + LL A AM ++ G N +QF++ A+ E V RL + L+ A+ Sbjct: 773 GIAVFPADGTDAATLLRHADTAMALAKREGRNNFQFYTHALTEAVFSRLNIETGLRHALE 832 Query: 554 NNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIA 613 ++L+L YQP + A +G + +E+L RW P G V P FIP+AE+ I +GRW + Sbjct: 833 RDELRLHYQPILDAASGRIAAMESLMRWQHPERGLVSPGVFIPVAEQSDLILALGRWALV 892 Query: 614 EACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMM 673 AC Q+ W + +SVN+ A HFR +V + G+ L +E+TES + Sbjct: 893 SACAQVRAWSDAGLEPVPVSVNIPACHFRQPGFVEEVLGVVRETGVQPQSLIIELTESAL 952 Query: 674 MEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRI 733 ME + +RI+ LRD GV +++DDFGTG+S L L V +K+D+SFV ++ Sbjct: 953 MEPVSLAEERIRRLRDTGVVVAIDDFGTGYSSLGYLQRFHVNYLKVDRSFVSGLPGDENA 1012 Query: 734 LALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 A+ EA+ + SL L VVAEGVET+ Q + LR C +QGY RP+ AE + Sbjct: 1013 RAITEAVIGVSHSLGLQVVAEGVETQAQLDHLRATGCDKVQGYLTGRPVTAEVAATLL 1070 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 87/253 (34%), Gaps = 5/253 (1%) Query: 16 PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRH 75 LE ++ + V F NPAAE L G ++ G + ++ + Sbjct: 399 QVLEAVDEAIFGLDADCRVEFANPAAEALAGCSIGQMRGQRLSGVLQIRDDQGRSAWEPD 458 Query: 76 NREGGKARVEGMSR---ELQLEKKDGSKIWTRFALSKVSAEGKV-YYLALVRDASVEMAQ 131 + + R + L +DG + +A + G+V + RD + Sbjct: 459 GDCLAEDPMPVSIRRAFDQTLYHRDGRVLVVDYAFRPILEGGQVRGGVFSCRDITGRKRI 518 Query: 132 KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFP 191 +E R D V++ D I+ NRAF ++ GY E G P +L+ Sbjct: 519 EESLRLHAQVFDTATEGVMIADARGRILSVNRAFEQVTGYSAEEVVGRNPS-ILSSGRQD 577 Query: 192 ADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEE 251 R+ + E + GE +IS + + V FSDIT + Sbjct: 578 KAFYRRMWDTIKGEGIWSGEIWNRRKDGEIYPEWLTISSIAGPNGEASHFVAVFSDITAQ 637 Query: 252 RQIRQLEGNILAA 264 ++ Q + Sbjct: 638 KRSEQEIDFLANH 650 >UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLU1_AGRRK Length = 766 Score = 724 bits (1869), Expect = 0.0, Method: Composition-based stats. Identities = 198/721 (27%), Positives = 318/721 (44%), Gaps = 51/721 (7%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYC-ISEASGM 179 + D+ E E+ L ++ + + D E + N+A G + + G Sbjct: 36 MSDDSHHEADLGERQSWLENMINQIPDYIYAKDLEGRFLFANQAIVANNGLSHLKDLVGR 95 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQ--DEFLLLTRTGEKIWIKASISPVYDVLAH 237 L P A +++ + +T + E L GE+ W+ + P+ D Sbjct: 96 TDFDFL--PHHIAQIATDVERSVAETGQPHFGGEELAFRGGGER-WLMITRVPLRDASGT 152 Query: 238 LQNLVMTFSDITEERQIRQLEGN---ILAAMCSSPPFHEMGEIICRNIESVLNESHVSLF 294 + +V D+T ++ + +L + P E + H + Sbjct: 153 IVGVVGVSRDVTAQKSAERRMRAQSGLLEMIARGMPLPNFLEELALMTAGFAKGVHAAFL 212 Query: 295 ALR------------------------------------NGMPIHWASSSHGAEIQNAQS 318 + + A G + Q Sbjct: 213 TITPDPAELRLAAAPTLNEDYRKRANATFIRTVPTDLDAAAAALKLAFDQAGISELDHQC 272 Query: 319 WSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQF 378 I DG GIL + +S G+ I+ HMA +A+ + ++ I L Sbjct: 273 RCLAISDADGQIEGILALYSSEGSRFQPDFSEFVSIAVHMAGIAISRHRAEARIGFLADH 332 Query: 379 DPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVV 434 DP+TG+ NR L L + A S + + +D+ + V DSLG++ DQ L V Sbjct: 333 DPLTGMANRALLDRKLTFAMQTADSTRSEVALAFLDLDNFKLVNDSLGHSVGDQLLKIVA 392 Query: 435 NRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLS 494 +R E L RI G +FV++ + D+ + +R V++PI+++D +T S Sbjct: 393 SRISELTSDQGSLARIGGDEFVIILEQMDLESCLDRLSAIREAVTRPIVLNDIELRVTCS 452 Query: 495 IGIS--YDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAI 552 IG++ G LL++A AM ++ G +G F+ AM +V+++L L++A+ Sbjct: 453 IGVASYPSHGSTAGELLASADMAMYRAKELGRDGIALFTSAMTAIVRKKLSRTDELRQAL 512 Query: 553 SNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVI 612 ++ L YQPQ+ TG + EAL RW+ G V P FI LAEE I IG WV+ Sbjct: 513 LRDEFVLHYQPQVDVRTGRIVAAEALIRWNHSSEGLVYPGDFIALAEETSLIVPIGEWVL 572 Query: 613 AEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESM 672 ACRQ W+ Q +SVN+SA F+ +L V+ A+ G+D L +EITES+ Sbjct: 573 KTACRQAKAWQDQGREPIRISVNVSARQFQEKRLIETVATALSESGLDPIWLELEITESL 632 Query: 673 MMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKR 732 +M+ R+Q L +GV L+VDDFGTG+S LS L P++ +KID+SF+ + Sbjct: 633 IMKDLAGSIARMQELETLGVKLAVDDFGTGYSSLSALKRFPLSRLKIDRSFIADIPHDAD 692 Query: 733 ILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 +A+ AI S+ Q L L V+AEGVET+EQ L + C IQGY FSRP+ + + Sbjct: 693 DMAITAAIISLAQKLGLEVIAEGVETEEQARFLVESGCNEIQGYLFSRPVEEAQFNRMLE 752 Query: 793 S 793 + Sbjct: 753 N 753 >UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W545_9CYAN Length = 709 Score = 724 bits (1869), Expect = 0.0, Method: Composition-based stats. Identities = 182/701 (25%), Positives = 299/701 (42%), Gaps = 46/701 (6%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPER-HIVQCNRAFTEMFGYCISEASGM 179 + +D +E +++ + + ++ LD V + ++ N+A + G + E Sbjct: 3 ITQDNGIEPKSQKRHQLIPAILNSLDEVVWSASAQTYKLLYINQAAETILGRTLCELYDQ 62 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 L I + Q L ++ E+ ++ GE WI + + D + Sbjct: 63 PTLWELMIHPDDRQRVQQQFQSLGESGNQAVEYRIVRPDGEVRWIHNRVCAIADETGTVI 122 Query: 240 NLVMTFSDITEERQIRQL---EGNILAAMCSSPP-----FHEMGEIICRNIES--VLNES 289 + DIT+ +Q E ++L + + G II N S VL + Sbjct: 123 RIDGIARDITQRKQAEVQLCPENDLLQGIMQTSIAAITVVDTQGNIIFANARSQQVLGLT 182 Query: 290 HVSLFALRNGMPIHWASSSHGAEIQNAQ--------------SWSATIRQRDGAPAGIL- 334 L R P + G Q I DG + Sbjct: 183 QSELVERRYNCPTWQITDFQGGPFPEEQLPFQQVMVTGQPVFDVQHAIEWADGTRKYLSV 242 Query: 335 --QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHN 392 + + + V DIS H + + + D +T LPNR Sbjct: 243 NGAPLKDADGVITHIVFSVTDISHH--------KHVEEQLCHDALHDNLTRLPNRTLFME 294 Query: 393 YLDDLVDKAVS-----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYL 447 ++ + A V + +D + V DSLG+ DQ L + + ++ + Sbjct: 295 RVNHAIKLAKRNQDYLFAVLFLDLDRFKVVNDSLGHDVGDQLLTATARQLEKCVRTTDTV 354 Query: 448 CRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLG--KN 504 + G +F ++ + D+ + T++A+ ++ + P +++ + SIGI+ + Sbjct: 355 AHLSGDEFTILLEDIKDIKDATRVAERIQATLKAPFNLNNHEVFTSASIGIALSSTGYER 414 Query: 505 RDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQ 564 + +L A AM ++ G + F M+ E L L L+ A+ + ++ YQP Sbjct: 415 SEDILRDADIAMYRAKELGKARHEIFDKIMHARALELLRLENDLRRALERQEFEVYYQPI 474 Query: 565 IFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRS 624 TG L G EAL RW P G V P+ FIP+AE+ G I +G WV+ EACRQL W + Sbjct: 475 TSLVTGMLTGFEALVRWRHPELGLVSPAEFIPVAEDTGLIIPLGEWVLHEACRQLRMWHT 534 Query: 625 QNI--HIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFK 682 Q +SVNLS + L Q+ + G+DG L +EITES++ME+ + K Sbjct: 535 QFPTPEPLKMSVNLSGKQIKEPDLIEQIDHILAETGLDGSFLKLEITESILMENAETVTK 594 Query: 683 RIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITS 742 + LR + LSVDDFGTG+S LS L PV +KID+SFV + + R ++ I + Sbjct: 595 MLLQLRARNIQLSVDDFGTGYSSLSYLHRFPVNTLKIDRSFVSKMNPKNRNTEIIRTIIT 654 Query: 743 IGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLP 783 + SL + V+AEGVET EQ L+ ++C QGY FS+PL Sbjct: 655 LAHSLRMDVIAEGVETLEQLTELKLLNCEQGQGYLFSKPLT 695 Score = 95.1 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 58/356 (16%), Positives = 133/356 (37%), Gaps = 25/356 (7%) Query: 30 ENDEVMFFNPAAEKLWGYKREEVIGNN--IDMLIPRDLRPAHPEYIRHNREGGKARVEGM 87 + ++++ N AAE + G E+ +++I D R + + E G V Sbjct: 37 QTYKLLYINQAAETILGRTLCELYDQPTLWELMIHPDDRQRVQQQFQSLGESGNQAV--- 93 Query: 88 SRELQLEKKDGSKIWTRFALSKVSAE-GKVYYL-ALVRDASVEMAQK----EQTRQLIIA 141 E ++ + DG W + ++ E G V + + RD + + + L Sbjct: 94 --EYRIVRPDGEVRWIHNRVCAIADETGTVIRIDGIARDITQRKQAEVQLCPENDLLQGI 151 Query: 142 VDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPD------TLLNIPEFPADNR 195 + + V+D + +I+ N ++ G SE + + T FP + Sbjct: 152 MQTSIAAITVVDTQGNIIFANARSQQVLGLTQSELVERRYNCPTWQITDFQGGPFPEEQL 211 Query: 196 IRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIR 255 Q ++ + + G + ++ + +P+ D + ++V + +DI+ + + Sbjct: 212 PFQQVMVTGQPVFDVQHAIEWADGTRKYLSVNGAPLKDADGVITHIVFSVTDISHHKHVE 271 Query: 256 QLEGN--ILAAMCSSPPFHEMGEIICRNIESVL-NESHVSLFALRNGMPIHWASSSHGAE 312 + + + + P E + I+ N+ ++ + + S G + Sbjct: 272 EQLCHDALHDNLTRLPNRTLFMERVNHAIKLAKRNQDYLFAVLFLDLDRFKVVNDSLGHD 331 Query: 313 IQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKS 368 + + Q +AT RQ + + SG E + +E + DI A E+ ++ Sbjct: 332 VGD-QLLTATARQLEKCVRTTDTVAHLSGDEFTILLEDIKDIKD--ATRVAERIQA 384 >UniRef50_C1DCZ4 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCZ4_LARHH Length = 759 Score = 724 bits (1869), Expect = 0.0, Method: Composition-based stats. Identities = 189/685 (27%), Positives = 312/685 (45%), Gaps = 31/685 (4%) Query: 126 SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 S ++ Q ++ + +L E ++ N+ +EM GY +G L+ Sbjct: 72 SQRSELRDLRAQYDALIEQSLVGIYIL-KEHTLIYANQRASEMLGYPAGALAGKSLVDLM 130 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 ++ L+ R G ++ ++ S + + +V Sbjct: 131 PPGVAHEIGESVRRRHRDNITEQHYVLPLIHRNGHRLSVELH-SRLTEFRGERV-IVGVG 188 Query: 246 SDITEERQIRQLEGNILAAMCSSPP----FHEMGEIICRNI--ESVLNESHVSLFALRNG 299 DI+ + + +S G +I N + + R+ Sbjct: 189 LDISARLETERTLQLAATVFENSSEGILLTDADGTLITVNPAFTRITGYTEEQALGRRSR 248 Query: 300 MPIHWASSS-----HGAEIQNAQSWSATI--RQRDGAPAGILQIKTSSGAE--TSAFIER 350 M + W + R RDG + ++ E S ++ Sbjct: 249 MFRTDHVGQATNMQMMQSLAEHGHWQGEMFDRHRDGRLYPVWLSLSAVYDEDRVSNYVGV 308 Query: 351 VADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA--VSPVVYL 408 DIS+ ++ + + L DP+T L NR+ L L+D+ S V Sbjct: 309 FTDISR--------RKAAEDRLVFLASHDPLTRLLNRDALFRKLEDICLSGIEQSFAVLF 360 Query: 409 IGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN-DVSNI 467 I +D + + DS G+A D L V R + + L R G +F L+ + + + Sbjct: 361 IDLDRFKLINDSFGHATGDNLLRIVAARLSFVVGSNALLARQGGDEFTLLLEDTGQRTAV 420 Query: 468 TQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGN 525 +A+ L + +S+PI ++++ +T SIGI+ + GK+ LL A A+ + G N Sbjct: 421 IDMANRLLDELSQPITLENQELHITASIGIALAPEHGKDAATLLRHADTALYRAKDAGKN 480 Query: 526 GWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPL 585 + FF+ ++ + +RL L AL+ A+ NQL L YQPQI L G+E L RWH P Sbjct: 481 TFAFFTHTLHGLSNQRLALENALRHALPRNQLTLAYQPQIDPHRQRLVGVEVLLRWHHPE 540 Query: 586 HGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQ 645 G V P+ FIPLAEE G I IGRWV+ ACRQLA W + + ++VNLSA F Sbjct: 541 LGQVSPATFIPLAEETGLILPIGRWVLETACRQLAAWDTAGFSVGHVAVNLSAHQFNDPG 600 Query: 646 LPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSG 705 L + + + G+ +L +E+TES ++ + T + L+++GV LS+DDFGTG+S Sbjct: 601 LTHHLKAVLSDSGLAARRLELEVTESTLINNPTAAIALMTELKELGVRLSIDDFGTGYSS 660 Query: 706 LSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEML 765 L++L P+ +KID++FV + LA+ EAI ++ + L+L+VVAEGVET +Q + L Sbjct: 661 LAQLKRFPLDTLKIDRTFVSGIPADASDLAITEAIIAMAKKLSLSVVAEGVETADQRDFL 720 Query: 766 RKIHCRVIQGYFFSRPLPAEEIPGW 790 + +IQGYF+S PL AE + + Sbjct: 721 ARCGSELIQGYFYSPPLAAEALHSF 745 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 104/271 (38%), Gaps = 11/271 (4%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 + +EQ+++G ++ E+ +++ N A ++ GY + G ++ L+P + E + Sbjct: 84 YDALIEQSLVGIYILKEH-TLIYANQRASEMLGYPAGALAGKSLVDLMPPGVAHEIGESV 142 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKE 133 R + + L L ++G ++ G+ + + D S + + Sbjct: 143 RR---RHRDNITEQHYVLPLIHRNGHRLSVELHSRLTEFRGERVIVGVGLDISARLETER 199 Query: 134 QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPAD 193 + ++ +++ D + ++ N AFT + GY +A G + + Sbjct: 200 TLQLAATVFENSSEGILLTDADGTLITVNPAFTRITGYTEEQALGRR-SRMFRTDHVGQA 258 Query: 194 NRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQ 253 +++ Q L + Q E R G + S+S VYD + N V F+DI+ + Sbjct: 259 TNMQMMQSLAEHGHWQGEMFDRHRDGRLYPVWLSLSAVYDED-RVSNYVGVFTDISRRKA 317 Query: 254 IRQL-----EGNILAAMCSSPPFHEMGEIIC 279 + L + + E IC Sbjct: 318 AEDRLVFLASHDPLTRLLNRDALFRKLEDIC 348 >UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KF61_9GAMM Length = 810 Score = 723 bits (1868), Expect = 0.0, Method: Composition-based stats. Identities = 197/766 (25%), Positives = 349/766 (45%), Gaps = 47/766 (6%) Query: 58 DMLIPRDLRPAHPEYIRHNREGGKARV-------EGMSRELQLEKK--DGSKIWTRFALS 108 D +P L + + + G +A + EG ++E+ G + W R Sbjct: 52 DDELPLSLDTILGQVVNEDVAGFEAAMARLITEPEGKAQEVDFRADLDSGEQRWFRAIGR 111 Query: 109 KV--SAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFT 166 S + + ++ D + AQ+ + + ++ E I N A+ Sbjct: 112 SYANSEQTVTHAAGVLLDVT---AQQSAQQYYDTFFQQPNGMHLLASIEGDIKLANSAWE 168 Query: 167 EMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKA 226 GY E G L++ + A +Q L E + G I Sbjct: 169 LALGYTPEELIGKNFLELVHEEDR-AVTVKEMQNLSKGLKTLYFENRYRHKNGSYRVIAW 227 Query: 227 SISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE------IICR 280 S + + DI++E +Q A +S + + + Sbjct: 228 SAA----AADQDSIICAVGRDISKENAAKQGLFQAAAVFKNSGEGILISDEKGLIRDVNA 283 Query: 281 NIESVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGI 333 + S LR+G ++ +W I R++ GA Sbjct: 284 AFSQITGYSRDEAIGQATSLLRSGRHDAEFYKKMWHALKETGTWRGEIWNRRKSGAVFPE 343 Query: 334 LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNY 393 L + + S F+ DI+Q +++ + +++L +DP+T LPNR ++ Sbjct: 344 LLTISKIDGQNSGFVAIFTDITQ--------LKETEEQLQKLAHYDPLTELPNRYLINER 395 Query: 394 LDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCR 449 L + +A V+ + +D +++ DSLG+ D+ L NR RE L+ D + R Sbjct: 396 LQQSIRRAQRRSERLAVFFLDIDSFKNINDSLGHLAGDKLLAMTANRLRELLRDDDTVGR 455 Query: 450 IEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRD 506 I G +F+++ + N T IA+++ + KP +++ + ++ S+GIS D G+ + Sbjct: 456 IGGDEFLMLLEDINSPDVATNIAEKIIGALRKPTILEGRSVSVSASVGISIYPDDGQTAE 515 Query: 507 YLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIF 566 L+S A AM ++ G N ++F+S + + +++ +AL+EA S N+ +L +QPQI Sbjct: 516 TLMSNADAAMYSAKEQGRNTFRFYSENLTRAAFQNVLIDSALREAKSRNEFRLAFQPQID 575 Query: 567 AETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN 626 T L G+E L RWH P G V P++FIP AE G I +IG+WV+ +AC Q +W ++ Sbjct: 576 IVTNSLLGLEVLLRWHHPTLGTVSPAQFIPQAERTGLIRDIGQWVLEQACLQGNKWLAEG 635 Query: 627 IHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQI 686 + L+VN+SA FR+ +QV + ++L +E+TES++++ ++ + Sbjct: 636 LPFGRLAVNVSAPQFRAEDFVDQVRQVLEYANFPPNRLELELTESVLVQDTEQLIGNMDE 695 Query: 687 LRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQS 746 LR MG+ ++DDFGTG+S LS L +P+ +K+DKSFVD T+ + EA+ ++GQ+ Sbjct: 696 LRAMGIQFAIDDFGTGYSSLSYLKKMPIDRLKLDKSFVDNISTDDNDRIIAEAVVALGQA 755 Query: 747 LNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 + L V+AEG+E +EQ LR I C QG+ + P+ I G + Sbjct: 756 MGLEVIAEGIEYEEQARALRDIGCTQFQGFLYGMPMYTSRIEGVLR 801 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 114/287 (39%), Gaps = 14/287 (4%) Query: 6 ADNAADGIFFPALEQNMMGA-VLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 A +A ++ Q G +L + ++ N A E GY EE+IG N L+ + Sbjct: 132 AQQSAQQ-YYDTFFQQPNGMHLLASIEGDIKLANSAWELALGYTPEELIGKNFLELVHEE 190 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRD 124 R + +++ +G ++ + E + K+GS ++ + + + A+ RD Sbjct: 191 DRAVTVKEMQNLSKG----LKTLYFENRYRHKNGSYRVIAWSAAAADQDSIIC--AVGRD 244 Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 S E A K+ Q + +++ D + I N AF+++ GY EA G L Sbjct: 245 ISKENAAKQGLFQAAAVFKNSGEGILISDEKGLIRDVNAAFSQITGYSRDEAIGQATS-L 303 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 L A+ ++ L +T + E ++G +IS + V Sbjct: 304 LRSGRHDAEFYKKMWHALKETGTWRGEIWNRRKSGAVFPELLTISKI---DGQNSGFVAI 360 Query: 245 FSDITEERQIRQLEGNI--LAAMCSSPPFHEMGEIICRNIESVLNES 289 F+DIT+ ++ + + + P + + E + ++I S Sbjct: 361 FTDITQLKETEEQLQKLAHYDPLTELPNRYLINERLQQSIRRAQRRS 407 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 723 bits (1868), Expect = 0.0, Method: Composition-based stats. Identities = 154/472 (32%), Positives = 254/472 (53%), Gaps = 8/472 (1%) Query: 328 GAPAGILQI-KTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPN 386 G G+LQ+ + T + + + D H E +++ + I ++ D +TGLPN Sbjct: 403 GQQCGLLQVAYIRNFPSTLTYQQNLVDTIAHDLGRWYEGKEAEKRIIEMATHDALTGLPN 462 Query: 387 RNNLHNYLDDLV----DKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLK 442 R L + ++ ++ V I +DH + + DSLG+ D L V +R + ++ Sbjct: 463 RYLLRDRIEQVLVHDTRLQRQMAVLFIDLDHFKTINDSLGHEIGDLLLKAVADRLKSCVR 522 Query: 443 PDQYLCRIEGTQFVLVSL-ENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY-- 499 + + R G +F++V + + ++A ++ + + P I + SIGI+ Sbjct: 523 NEDTVARQGGDEFIVVLNSIAESLDAAKVAQKILDSFALPFHIHKNELHIDGSIGIAVFP 582 Query: 500 DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKL 559 D G N + LL + AM + +KNG N +QFF+ +N+ ER +LG L+ A+ N+L L Sbjct: 583 DDGVNAETLLKNSDVAMYHAKKNGRNNYQFFTDELNKSAYERHILGLDLRYALERNELLL 642 Query: 560 VYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQL 619 YQP + + LYG+EAL RW P + P +FI LAEE G I IG WVI C Q+ Sbjct: 643 YYQPVMDMPSHNLYGVEALLRWRHPEQKLITPDKFINLAEETGLIIPIGEWVIRTVCLQI 702 Query: 620 AEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTE 679 W+ Q ++P +++NLSA FR L +S + G+ + +EITESM++++ + Sbjct: 703 KAWQEQGFYVPRVAINLSARQFRDKDLIKNISRILSETGVKAKHIALEITESMLIDNIEK 762 Query: 680 IFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEA 739 + + + L MG+ +S+DDFGTG+S LS L P+ +KID+SFV +T+K ++ A Sbjct: 763 VVETLNRLDAMGLHISIDDFGTGYSSLSYLKQFPIHTLKIDRSFVRDLVTDKNDRTIVAA 822 Query: 740 ITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 I ++ SL + V+AEG+E +EQ + L C QGY+FS+P+ EI + Sbjct: 823 IIAMAHSLEMEVIAEGIEIEEQLDFLVTQKCNHYQGYYFSKPVTVSEIELML 874 >UniRef50_A6QAR7 Signal transduction protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAR7_SULNB Length = 958 Score = 722 bits (1865), Expect = 0.0, Method: Composition-based stats. Identities = 180/690 (26%), Positives = 335/690 (48%), Gaps = 39/690 (5%) Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 ++ A+++ D +++ D +RHI N AF GY E G P +L Sbjct: 273 KKNAKELLAFRYAIENSDNVIVITDAQRHIEYVNDAFELRTGYKKEEVLGENP-NILKSD 331 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 + L + L + Q E + + G I+ K SI P++ + L + D+ Sbjct: 332 LVSPEIYKNLNETLDSGEKWQGELINKRKDGSLIYEKVSIVPIF-MDGELIQYLAIKLDV 390 Query: 249 TE---ERQIRQLEGNILAAMCSSPPFHE-----------MGEIICRNIESVLNESHVSLF 294 T +++I Q + + + ++ E ++ + + + Sbjct: 391 TAYIRQQKILQQAATVYENIGDGIVITDENKKIISINPAFSDLFGYTKEELVGKEPMIIM 450 Query: 295 ALRNGMPIHWASSSHGAEIQNAQSWSATIRQ--RDGAPAGI---LQIKTSSGAETSAFIE 349 +L+ + ++ A WS + +DG + + + + + +I Sbjct: 451 SLKEDK---VFYGNMWHQLLTAGRWSGRVENVTKDGKVLPVWLTIAVVRNEKQDIQNYIA 507 Query: 350 RVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV----SPV 405 ++ + + K L D +TGLPNR++ +++++ A Sbjct: 508 IYTNLEEII--------KMETKANYLAYHDSLTGLPNRSSFEMRINEILSVADIEKDKIA 559 Query: 406 VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN-DV 464 V I +D + + D+LG+ D+ L+E+ +R + +L D L RI G +FV++ Sbjct: 560 VLFIDLDRFKVINDTLGHHIGDEMLIELAHRIQTQLDNDTLLARIGGDEFVVIMKLKMHK 619 Query: 465 SNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKN 522 + A++L +V+ +PI I + T SIGI+ D GK+++ ++ A +AM + ++ Sbjct: 620 KEAGEQAEKLLDVIREPIDIQNYHLNTTASIGIAIYPDDGKDKNEIVKHADSAMYHAKEK 679 Query: 523 GGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWH 582 G + +QF++ ++ V+ RL L L AI +L L +QPQ E+ + G+EAL RW Sbjct: 680 GKDTFQFYTKQLSLDVEARLNLEQELLHAIERKELLLHFQPQYALESRNIIGVEALLRWK 739 Query: 583 DPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFR 642 + G V P +FI +AEE G I +IG +V EAC+ W+ + I I ++S+N+S++ FR Sbjct: 740 NEQLGIVSPEKFIGIAEETGLIVSIGYFVFEEACKTYMHWQKEGIDIDSISINMSSIQFR 799 Query: 643 SNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTG 702 + ++ + + GI H++ +EITE +ME+ T ++ LR++G +S+DDFGTG Sbjct: 800 EEDIFERLQEIILRIGIPAHKIEIEITERFIMEYSTINLTILEDLRNIGCKISIDDFGTG 859 Query: 703 FSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQF 762 +S +S L L + IKIDKSF+ + + +AI ++ +SL V+AEG+ET EQ Sbjct: 860 YSSMSYLKRLALDTIKIDKSFITDLPHDSHDAMVSKAIIALSKSLGYQVIAEGIETPEQE 919 Query: 763 EMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 L+K C + QG++F++P+ +E+ + + Sbjct: 920 AFLKKNGCDIGQGFYFAKPMTSEDFISFFN 949 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 118/249 (47%), Gaps = 6/249 (2%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 F A+E + V+ + + + N A E GYK+EEV+G N ++L + P + + Sbjct: 282 FRYAIENSDNVIVITDAQRHIEYVNDAFELRTGYKKEEVLGENPNILKSDLVSPEIYKNL 341 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK-VYYLALVRDASVEMAQK 132 + G+ EL ++KDGS I+ + ++ + +G+ + YLA+ D + + Q+ Sbjct: 342 NETLDSGEK----WQGELINKRKDGSLIYEKVSIVPIFMDGELIQYLAIKLDVTAYIRQQ 397 Query: 133 EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPA 192 + +Q +++ +++ D + I+ N AF+++FGY E G +P ++++ E Sbjct: 398 KILQQAATVYENIGDGIVITDENKKIISINPAFSDLFGYTKEELVGKEPMIIMSLKE-DK 456 Query: 193 DNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER 252 + L R +T+ G+ + + +I+ V + +QN + ++++ E Sbjct: 457 VFYGNMWHQLLTAGRWSGRVENVTKDGKVLPVWLTIAVVRNEKQDIQNYIAIYTNLEEII 516 Query: 253 QIRQLEGNI 261 ++ + Sbjct: 517 KMETKANYL 525 >UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magnetospirillum RepID=A4U4R0_9PROT Length = 840 Score = 722 bits (1864), Expect = 0.0, Method: Composition-based stats. Identities = 201/849 (23%), Positives = 350/849 (41%), Gaps = 73/849 (8%) Query: 10 ADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAH 69 D I + +G +LI ++ V +N K G E +G + L P+ Sbjct: 6 PDHILRTLTDAGEIGIILIGQDGLVKLWNAWMTKASGITAEAALGTRLQDLYPQLQGARV 65 Query: 70 PEYIRHNREGGKARVEGMSRELQLE------KKDGSKIWTR--FALSKVSAEGKVYYLAL 121 + GG + + S +L + G + A+ V + Sbjct: 66 VGAVDEALHGGLSAILSSSINKRLFPLNHEGRTPGKPEPMQQIVAVKPVVVAEDQRDCLI 125 Query: 122 -VRDASVEMAQKEQTRQLII------------------AVDHLDRPVIVLDPERHIVQCN 162 V D + ++ RQ VD+ ++ + I N Sbjct: 126 QVFDVTTMSHREALLRQQARTMQALAENYRLSELHNRAIVDNTADAIVTFGEDGAIGTYN 185 Query: 163 RAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKI 222 A +FGY E G LL ++ ++ L + E + + G Sbjct: 186 PAAIRIFGYDPYEIVGKSV-GLLIPGVLGKSGQLETERFLD----IRAEVVGRRKIGASF 240 Query: 223 WIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIIC--- 279 ++ S++ + L + V DITE + + + S + M +++C Sbjct: 241 PLELSLNAM--ELGGQRLFVAIAHDITERKAAEEELRKQKEWL--STLINAMPDLVCFKD 296 Query: 280 -RNIESVLNESHVSLFALRNG------------MPIHWASSSHGAEIQNAQSWS------ 320 + V N+ ++ + L + M + + + ++W Sbjct: 297 GKGKWLVANKFYLDIAGLDHVDYHGRTSADLAHMSRGFGEFMLTGSLSDERAWQEKKPVA 356 Query: 321 --ATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQF 378 + DG IK E A V + E++ + I L Sbjct: 357 YEKELPTPDGGAKVFDVIKIPLYEEDGARRGLVM-----VGRDVTERKLAAARIHHLAHH 411 Query: 379 DPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVV 434 D +TGLPNR L + +A + + +D +D+ D+LG+ D L V Sbjct: 412 DSLTGLPNRVLFQERLRTALAQAKRLGHKVALMFLDLDKFKDINDTLGHHLGDLLLKAVA 471 Query: 435 NRFREKLKPDQYLCRIEGTQF-VLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTL 493 R ++ + R+ G +F V+++ +D + +A+ + +S+P +D+ + Sbjct: 472 KRLLRCVRETDTVARLGGDEFAVVLTNLDDPEGASNVAESIIASISEPFGLDEHEVNTST 531 Query: 494 SIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEA 551 SIGI+ D + + LL A AM + G N + F+ M+ ++ R V+ L+ A Sbjct: 532 SIGITIFPDDAVDSEVLLKNADLAMFRSKAEGRNNYHFYVAEMDAEIQARKVVEHDLRVA 591 Query: 552 ISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWV 611 + +QL++ YQP I +TGE+ G EAL RW P G V P FIP+AE I +GRW+ Sbjct: 592 LGTDQLEMHYQPLIEMKTGEVVGCEALIRWKHPTRGWVSPVEFIPIAERTDLIVPLGRWI 651 Query: 612 IAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQ-LPNQVSDAMHAWGIDGHQLTVEITE 670 + +C Q +W + ++VNLS + F+++ L ++D + G QL +EITE Sbjct: 652 LHRSCLQGRDWARAGLPPQKIAVNLSPVQFKNHTALLAMIADILDQTGFPPDQLQLEITE 711 Query: 671 SMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTE 730 + M++ ++ LRDMGV +S+DDFGTG+S L+ L PV ++KID+SFV Sbjct: 712 GIAMQNVEATVDVLRQLRDMGVLISIDDFGTGYSSLNYLKRFPVDKLKIDRSFVVDIGLH 771 Query: 731 KRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 A++ AI ++G SL V EGVET EQ + L+ QG++F++ LP +E + Sbjct: 772 PDNAAVVNAIVTLGHSLGTRVNVEGVETIEQLDFLKAHGVDEAQGFYFAKALPPDEFARF 831 Query: 791 MSSVLPLKI 799 + P + Sbjct: 832 VREKSPWPL 840 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 103/270 (38%), Gaps = 16/270 (5%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 L + ++ ++ V E+ + +NPAA +++GY E++G ++ +LIP Sbjct: 150 LAENYRLSELHNRAIVDNTADAIVTFGEDGAIGTYNPAAIRIFGYDPYEIVGKSVGLLIP 209 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALV 122 + + + R + E+ +K G+ +L+ + G+ ++A+ Sbjct: 210 G--------VLGKSGQLETERFLDIRAEVVGRRKIGASFPLELSLNAMELGGQRLFVAIA 261 Query: 123 RDASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 D + A +E+ R+ L ++ + V D + + N+ + ++ G + G Sbjct: 262 HDITERKAAEEELRKQKEWLSTLINAMPDLVCFKDGKGKWLVANKFYLDIAGLDHVDYHG 321 Query: 179 MQPDTLLNIP----EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 L ++ EF + ++ + E L T G P+Y+ Sbjct: 322 RTSADLAHMSRGFGEFMLTGSLSDERAWQEKKPVAYEKELPTPDGGAKVFDVIKIPLYEE 381 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNILAA 264 + LVM D+TE + ++ Sbjct: 382 DGARRGLVMVGRDVTERKLAAARIHHLAHH 411 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 722 bits (1864), Expect = 0.0, Method: Composition-based stats. Identities = 186/632 (29%), Positives = 293/632 (46%), Gaps = 21/632 (3%) Query: 171 YCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISP 230 Y ++E +G+ P L E P Q L + R ++ L + + SI Sbjct: 240 YIVAEPTGV-PSQLYITGEQPC------QPFLEEIPRWKNFIHRLRKLDGEQPEIESIEQ 292 Query: 231 VYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESH 290 HL N ++ E+ LA + ++P + R + Sbjct: 293 WQQNYQHLLNTQKVSWNLAEQSHRVIT----LAQLQANPHLKPIANAFERTNIRSIALIP 348 Query: 291 VSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQ--RDGAPAGILQIKTSSGAETSAFI 348 + + G + + + + R A Q + +S + Sbjct: 349 IQFNHQQVGCLTIFRNGYNSEIYWAGHHSQDERHKIPRASFEAWREQKFDQNPTWSSQEL 408 Query: 349 ERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----P 404 + I H+ +A+ Q++ I D +T LPNR L + + Sbjct: 409 KLALAIGLHL-YMAIAQKRVESIIRYQACHDALTHLPNRLLFDEQLALALANSKQQPELL 467 Query: 405 VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-ND 463 V + +D + V D+LG+ DQ L +V R ++ L+ + R G +F L+ Sbjct: 468 GVAFLDLDRFKVVNDTLGHGIGDQLLQQVATRLKQCLRNCDTIARWGGDEFTLLFPHLTS 527 Query: 464 VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRK 521 IT+IA + + +S P +ID++ +T S+GI+ ++ LL A AM +K Sbjct: 528 TDEITKIAHRILDKLSIPFVIDNQELYVTASLGIALCPYDAEDAQTLLKHADAAMYRAKK 587 Query: 522 NGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARW 581 G N +Q F+ M+ +L L A L+ A+ + L YQPQ+ TG++ G+EAL RW Sbjct: 588 QGRNNFQVFAEEMHREALNQLTLEADLRRALIKEEFLLYYQPQVEISTGKIVGLEALIRW 647 Query: 582 HDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHF 641 P G VPP +FIPLAEEIG I IG+WV+ AC Q W+++ + ++VNLSA F Sbjct: 648 QHPTLGFVPPDQFIPLAEEIGLIAPIGQWVLQTACIQHQSWQAEGLPPVRIAVNLSARQF 707 Query: 642 RSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGT 701 +QL N + + ID L +EITES M+ + +Q LR+MG+ +++DDFGT Sbjct: 708 HQSQLINIILQTLETTEIDPQYLELEITESAAMQDVEFTIQTLQELREMGLHITIDDFGT 767 Query: 702 GFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQ 761 G+S L+ L P+ +KID+SFV + R A+ + I ++ Q L L VVAEGVET +Q Sbjct: 768 GYSSLNVLKHFPLNTLKIDRSFVQDIVENSRDAAIAQTIVALSQGLKLKVVAEGVETPQQ 827 Query: 762 FEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 LR IHC + QGY+F P+PA EI + Sbjct: 828 LSFLRSIHCDLAQGYYFCPPVPAIEIAKLLRQ 859 >UniRef50_C7RN47 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RN47_9PROT Length = 1542 Score = 722 bits (1864), Expect = 0.0, Method: Composition-based stats. Identities = 201/797 (25%), Positives = 345/797 (43%), Gaps = 53/797 (6%) Query: 25 AVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARV 84 ++++ N + FN AA +L+ + G ++ L P ++H + A Sbjct: 755 LLVLDRNASLQRFNSAAARLFKLGAAQ-TGRHLRDLPLPPDMPDLLADVQHVIDTQNA-- 811 Query: 85 EGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASV----EMAQKEQTRQLII 140 R+ Q+ + A + + L D + E + +E +L Sbjct: 812 ----RDRQIVNANRRHYALHIAPLLRDTQRIAGVILLFADNTSLYEVERSARETQVRLQA 867 Query: 141 AVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQ 200 +++ + V D N F + FG+ E G L L+ Sbjct: 868 VMNNSVSLMAVKDAPGRYQFANPKFEQTFGFATGEVIGKTDLQLFPEAVSDLFRESELEA 927 Query: 201 LLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGN 260 + + +++E L L GE+ ++ P++D + L +DIT ++ + Sbjct: 928 IRLRKGIEREESLPLA-AGERHFL-VVRFPLFDDDGAITGLCFQATDITARKRAEEQLR- 984 Query: 261 ILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNG-----MPIHWASSSHGAEIQN 315 LAA+ + +N+S +L P S E Sbjct: 985 -LAALVFDRASEGVMVTDTEQRILTINDSFSTLTGYTRQEVVGKTPRLLRSDRMPREFYA 1043 Query: 316 A--------QSWSATI--RQRDGAP----AGILQIKTSSGAETSAFIERVADISQHMAAL 361 W I R+++G P I +K +G ++ +DI++ Sbjct: 1044 EMWDKVTRLGVWQGEIWNRRKNGEPYLEWLSINTVKDKNGKVV-NYVGMFSDITKV---- 1098 Query: 362 ALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDV 417 +S+Q IE L D +TGLPNR ++ L+ + A V I +D+ + V Sbjct: 1099 ----RESQQRIEYLATHDELTGLPNRALFNDRLNLALAHAERSRESVGVVFIDLDNFKVV 1154 Query: 418 IDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNV 477 D+LG+ D+ L + R E ++ + + R+ G +FV++ + D T A+ L Sbjct: 1155 NDTLGHETGDKLLKQAAMRLLECVRAEDTVARLGGDEFVVLLVNADRQQATLTAERLLTG 1214 Query: 478 VSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMN 535 +S + ++ SIG+S + + + L+ A +AM + +G NG++FFS + Sbjct: 1215 LSTSYHFGEHECFISASIGLSMFPEDASDANSLMRNADSAMYRAKDHGKNGFRFFSADLA 1274 Query: 536 EMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHG-HVPPSRF 594 +RL L L+ AI N +L + YQPQ+ E + G EAL RW +G + P F Sbjct: 1275 SQASKRLALETGLRRAIENGELFVHYQPQVRLECDTVVGAEALVRWR--YNGEVIDPVVF 1332 Query: 595 IPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAM 654 IP+AE+ I I WV+ EACRQ+ EW + +SVN+SA HFR + + + D + Sbjct: 1333 IPIAEQSHLIFAIDDWVLGEACRQIIEWDRAGLPPLRISVNISARHFRKDGMAADLMDIV 1392 Query: 655 HAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPV 714 A G+ +L +EITE ++M + + L + G+ +S+DDFGTGFS LS L P+ Sbjct: 1393 SAHGVSPQRLCIEITEGVLM-DVDRAQRMLAELVESGLRISIDDFGTGFSSLSYLKRFPI 1451 Query: 715 TEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQ 774 E+KI +SFVD T+ A+ I S+ + L ++VV EG+E Q L C Q Sbjct: 1452 HELKIARSFVDGISTDADDRAIASVIISLARQLGMSVVGEGIERTGQHAELEAFGCHRGQ 1511 Query: 775 GYFFSRPLPAEEIPGWM 791 G+ +++PL + W+ Sbjct: 1512 GFLYAQPLAPDAFADWV 1528 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 56/253 (22%), Positives = 93/253 (36%), Gaps = 6/253 (2%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 + + ++ + + F NP E+ +G+ EVIG L P + Sbjct: 857 SARETQVRLQAVMNNSVSLMAVKDAPGRYQFANPKFEQTFGFATGEVIGKTDLQLFPEAV 916 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLAL-VRD 124 + R + +G+ RE L G + + +G + L D Sbjct: 917 S----DLFRESELEAIRLRKGIEREESLPLAAGERHFLVVRFPLFDDDGAITGLCFQATD 972 Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 + +EQ R + D V+V D E+ I+ N +F+ + GY E G P L Sbjct: 973 ITARKRAEEQLRLAALVFDRASEGVMVTDTEQRILTINDSFSTLTGYTRQEVVGKTP-RL 1031 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 L P + + + + Q E + GE SI+ V D + N V Sbjct: 1032 LRSDRMPREFYAEMWDKVTRLGVWQGEIWNRRKNGEPYLEWLSINTVKDKNGKVVNYVGM 1091 Query: 245 FSDITEERQIRQL 257 FSDIT+ R+ +Q Sbjct: 1092 FSDITKVRESQQR 1104 Score = 63.1 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 75/232 (32%), Gaps = 20/232 (8%) Query: 3 LTDADNAADGIFFPAL--EQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 +T A + + AL ++ G ++ + ++ N + L GY R+EV+G +L Sbjct: 973 ITARKRAEEQLRLAALVFDRASEGVMVTDTEQRILTINDSFSTLTGYTRQEVVGKTPRLL 1032 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYY 118 + P R+ E+ +K+G W K V Y Sbjct: 1033 RSDRM----PREFYAEMWDKVTRLGVWQGEIWNRRKNGEPYLEWLSINTVKDKNGKVVNY 1088 Query: 119 LALVRDASVEMAQKEQTRQLII--AVDHLDRPVIVLDPERHIVQCNRAFTEMFG------ 170 + + D + +++ L + L + D + E G Sbjct: 1089 VGMFSDITKVRESQQRIEYLATHDELTGLPNRALFNDRLNLALAHAERSRESVGVVFIDL 1148 Query: 171 ---YCISEASGMQP-DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRT 218 +++ G + D LL +R + + + D+ LL+ Sbjct: 1149 DNFKVVNDTLGHETGDKLLKQAAMRLLECVRAEDTVARLGGDEFVVLLVNAD 1200 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 40/270 (14%), Positives = 83/270 (30%), Gaps = 47/270 (17%) Query: 130 AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE 189 +E +L + +D P++VLD + + N A +F ++ +G L P+ Sbjct: 736 ETQELNTELESIQNSVDYPLLVLDRNASLQRFNSAAARLFKLGAAQ-TGRHLRDLPLPPD 794 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 P + + ARD+ R I+P+ + +++ F+D T Sbjct: 795 MPDLLADVQHVIDTQNARDRQIVNANRRHYA-----LHIAPLLRDTQRIAGVILLFADNT 849 Query: 250 E----ERQIRQLEGNILAAMCSSPPF----------------------HEMGEIICRNIE 283 ER R+ + + A M +S GE+I + Sbjct: 850 SLYEVERSARETQVRLQAVMNNSVSLMAVKDAPGRYQFANPKFEQTFGFATGEVIGKTDL 909 Query: 284 SVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAE 343 + E+ LF I E S + + + Sbjct: 910 QLFPEAVSDLFRESELEAIRLRKGIEREE-------SLPLAAGERHFLVVRFPLFDDDGA 962 Query: 344 TSAFIERVADISQHMAALALEQEKSRQHIE 373 + + DI+ ++++ + + Sbjct: 963 ITGLCFQATDITA--------RKRAEEQLR 984 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 722 bits (1864), Expect = 0.0, Method: Composition-based stats. Identities = 189/708 (26%), Positives = 319/708 (45%), Gaps = 39/708 (5%) Query: 107 LSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAV-DHLDRPVIVLDPERHIVQCNRAF 165 L++ +Y + + E+ ++ + QL + DH V++LD + N A Sbjct: 369 LNRWIKGLIAHYHRDLEHSLEELGERSRDLQLSRFMTDHASDVVLLLDEDGAPRYLNAAA 428 Query: 166 TEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIK 225 + G + + P +P + + +L + + + ++ Sbjct: 429 AALLG---DDPAQRGPRLAALLPPSDQPLPLTYETVLDDVPFEVSLTSMQYQDHAYRSLR 485 Query: 226 AS-ISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNIL--AAMCSSPPFHEMGEIICRNI 282 A +S + F ++ I +I+ + + E I R Sbjct: 486 ARDMSRRQQAEQQQRLAAKIFDTSSQAIVISDASNHIVMVNRAFTDITGYSAQEAIGRQP 545 Query: 283 ESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGI---LQIK 337 + + F + ++ W+ I R++DG + + Sbjct: 546 SLLSSGRQPPAFYQK-----------MWQQLAQRGHWAGEIWNRRKDGTIYPEWLSISLL 594 Query: 338 TSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDL 397 + S + +DIS E+++ HI + + D +T LPNR +H+ L Sbjct: 595 RDEAGQVSHHVALFSDIS--------ERKEQEAHIRHMAEHDFLTDLPNRALIHDRLAQA 646 Query: 398 VDKAV----SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGT 453 + A V + +DH +++ D+LG+A D+ L +V R + ++ + R G Sbjct: 647 IRAAARQKNRLAVLFLDLDHFKNINDTLGHAHGDELLKQVAQRLQHTVRGSDTVGRNGGD 706 Query: 454 QFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLS 510 +FVL+ E + Q+A L + + +P ID + ++ SIGIS D G LL Sbjct: 707 EFVLIVPELASPAEAAQLAQRLLDDLRRPFQIDGQALAISTSIGISLFPDNGSELQELLV 766 Query: 511 TAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETG 570 +A AM + + G N +QFF+P +N V ERL L L++A+ QL LVYQPQ + Sbjct: 767 SADLAMYHAKAQGRNRYQFFTPELNAQVAERLTLENHLRQALERQQLYLVYQPQFAIDNR 826 Query: 571 ELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIP 630 L G EAL RW P G + P+RFIPLAEE G I IGRWV+ EACRQ A W + Sbjct: 827 RLVGCEALLRWQHPEQGLISPARFIPLAEETGLIVEIGRWVLDEACRQAAAWLAAG-TPL 885 Query: 631 ALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDM 690 ++VN+SA L +V A+ + L +E+TES +ME + + +Q ++ Sbjct: 886 RVAVNVSARQLGQPDLLAEVEAALARHRLPSCWLELEVTESTLMEDAEQAVRHLQAFKER 945 Query: 691 GVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLT 750 G+ L+VDDFGTG+S L+ L IKID++FV + A++ AI + ++L + Sbjct: 946 GIHLAVDDFGTGYSSLTYLKRFSPDLIKIDRAFVMNLPDNRDDAAIVSAIVQLAEALGMQ 1005 Query: 751 VVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLK 798 +AEGVE++EQ + L + C V+QGY RP A E+ ++ ++ Sbjct: 1006 TLAEGVESEEQLDFLAQAGCDVVQGYLTGRPQSAGELTAQLAGANSVE 1053 Score = 122 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 91/246 (36%), Gaps = 24/246 (9%) Query: 19 EQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNRE 78 + +L++E+ + N AA L G + G + L+P +P Sbjct: 406 DHASDVVLLLDEDGAPRYLNAAAAALLGDDPAQ-RGPRLAALLPPSDQP----------- 453 Query: 79 GGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQL 138 + + D + +L+ + + Y RD S ++Q R Sbjct: 454 --------LPLTYETVLDD---VPFEVSLTSMQYQDHAYRSLRARDMSRRQQAEQQQRLA 502 Query: 139 IIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRL 198 D + +++ D HIV NRAFT++ GY EA G QP LL+ P ++ Sbjct: 503 AKIFDTSSQAIVISDASNHIVMVNRAFTDITGYSAQEAIGRQPS-LLSSGRQPPAFYQKM 561 Query: 199 QQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLE 258 Q L + E + G SIS + D + + V FSDI+E ++ Sbjct: 562 WQQLAQRGHWAGEIWNRRKDGTIYPEWLSISLLRDEAGQVSHHVALFSDISERKEQEAHI 621 Query: 259 GNILAA 264 ++ Sbjct: 622 RHMAEH 627 Score = 72.8 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 55/141 (39%), Gaps = 8/141 (5%) Query: 18 LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNR 77 + + V+ + ++ ++ N A + GY +E IG +L PA + + Sbjct: 506 FDTSSQAIVISDASNHIVMVNRAFTDITGYSAQEAIGRQPSLLSSGRQPPAFYQKMWQQL 565 Query: 78 EGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYLALVRDASVEMAQKEQT 135 A+ + E+ +KDG+ W +L + A +++AL D S Q+ Sbjct: 566 ----AQRGHWAGEIWNRRKDGTIYPEWLSISLLRDEAGQVSHHVALFSDISERKEQEAHI 621 Query: 136 RQLII--AVDHLDRPVIVLDP 154 R + + L ++ D Sbjct: 622 RHMAEHDFLTDLPNRALIHDR 642 >UniRef50_B4B330 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B330_9CHRO Length = 1188 Score = 721 bits (1862), Expect = 0.0, Method: Composition-based stats. Identities = 204/827 (24%), Positives = 344/827 (41%), Gaps = 70/827 (8%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 +A ++ F + + +G + +++ N A ++ G+ E++ L D Sbjct: 389 EALKKSEEQFRLVFQHSPIGIAIATPEGKLVRVNEAFSQMMGFTEAELLKRTCGDLTYPD 448 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEG--KVYYLALV 122 + G A E + K G ++ + + E + + V Sbjct: 449 DLKNEIPLHQKLLAGEIAY---YRLEKRYLTKKGQVLYGMLHVGLIRDEQDKPLNLVGQV 505 Query: 123 RDASV----EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 D S E+A +E +L + + +IV++ + +I N A ++FG E Sbjct: 506 VDISEKTQAEIALRESEDRLSRIITTISDGLIVVNNQGNIKFINPAGEKLFGRSQEELLE 565 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 +P E + + I + + + + Sbjct: 566 QH----FGVPFVDGKT---------------TEIFIRHANQQLIVAEMRVGLI--IWEQQ 604 Query: 239 QNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEM---------GEIICRNI--ESVLN 287 + +++ DITE +QI + + S E +I N E V Sbjct: 605 KAHLISLRDITERKQIEKALSESEQRLESILNSIEDVVWSTSATTLNLIYLNPATERVYG 664 Query: 288 ESHVSLFALRN--------GMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGI---LQI 336 S L A N + E + I + DG + + Sbjct: 665 CSIEQLLAEGNLWFNLVHPDDQALIDAHFKALEDTGHSEYEYRIVRPDGTVRWLYSRSRT 724 Query: 337 KTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDD 396 + F +DI+ E++ + ++ DP+T LPNR L L++ Sbjct: 725 IYDPTGKPIRFEGIDSDIT--------ERKSFTEQLQYNAYHDPLTSLPNRIFLLEKLEE 776 Query: 397 LVDKAVS-----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIE 451 + K + V + +D + V DSLG+ DQ L+ + R + L L R Sbjct: 777 ALKKNQNRENIFFAVLFLDLDDFKVVNDSLGHIVGDQLLIAIAQRLKTSLSVPHTLARFG 836 Query: 452 GTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGK--NRDYL 508 G +F ++ E + A ++ N +++P ++ + ++ SIGI+ + + Sbjct: 837 GDEFTILLEEIQSTDEPLKAAQKIHNDLTQPYDLNGQQVFISTSIGIALSDPSYIHPQEI 896 Query: 509 LSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAE 568 L A AM ++ G G+ F M+ +RL L L++AI + L YQP + Sbjct: 897 LRDADTAMYQAKRWGKGGYAVFDQQMHLRAVKRLHLEIELRQAIELKEFLLYYQPIVSLS 956 Query: 569 TGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNI- 627 TG L G EAL RW P G + P FIP+AEE G I +G+W+ +ACRQL W+ Q Sbjct: 957 TGYLTGFEALIRWQHPKKGLISPVEFIPIAEETGLIVPMGKWITQQACRQLKLWQEQYNL 1016 Query: 628 -HIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQI 686 + +SVNLS+ R++ L ++ + + GID L +EITESM+ME+ + Sbjct: 1017 KNPLQISVNLSSKQLRNSHLIEEIDEILAQTGIDPSSLKLEITESMLMENVDIAMNILIE 1076 Query: 687 LRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQS 746 LR + L +DDFGTG+S LS L PVT +KID+SFV + ++ AI ++ S Sbjct: 1077 LRKRNIELCLDDFGTGYSSLSYLHRFPVTTVKIDRSFVMQMQPGNSNAEIVHAIITLAHS 1136 Query: 747 LNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 L +TV AEGVET+ Q + L+ + C QGYFFS+PLP +E + + Sbjct: 1137 LEMTVTAEGVETQLQLQQLQWLECEQAQGYFFSKPLPPKEAGTLIQA 1183 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 62/392 (15%), Positives = 129/392 (32%), Gaps = 33/392 (8%) Query: 2 KLTDAD-NAADGIFFPALEQNMMGAVLINEN----DEVMFFNPAAEKLWGYKREEVIGNN 56 K T+A+ ++ + + + +++ +N EK++G E IG+ Sbjct: 254 KQTEAEIQQTRNFLQTMIDHLPLAVFVKDGKPETFSQIILWNKTCEKIFGISATEAIGST 313 Query: 57 IDMLIPRDLRPAHPE------YIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV 110 + R E + + S +L + Sbjct: 314 TFEHFSDSQAEFFYQKDRETFARRMPLEIPEEEADSYSLGKRLLH--------TVKIPLY 365 Query: 111 SAEGKVYYL-ALVRDASVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAF 165 + + YL + D + +E + Q + H + + PE +V+ N AF Sbjct: 366 DEQDQPQYLLCISEDITERKRAEEALKKSEEQFRLVFQHSPIGIAIATPEGKLVRVNEAF 425 Query: 166 TEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKT-ARDQDEFLLLTRTGEKIWI 224 ++M G+ +E + L P+ + Q+LL A + E LT+ G+ ++ Sbjct: 426 SQMMGFTEAELL-KRTCGDLTYPDDLKNEIPLHQKLLAGEIAYYRLEKRYLTKKGQVLYG 484 Query: 225 KASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIES 284 + + D NLV DI+E+ Q + G I+ N + Sbjct: 485 MLHVGLIRDEQDKPLNLVGQVVDISEKTQAEIALRESEDRLSRIITTISDGLIVVNNQGN 544 Query: 285 V--LNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGA-PAGILQIKTSSG 341 + +N + LF G + ++ IR + +++ Sbjct: 545 IKFINPAGEKLFGRSQE---ELLEQHFGVPFVDGKTTEIFIRHANQQLIVAEMRVGLIIW 601 Query: 342 AETSAFIERVADISQHMAALALEQEKSRQHIE 373 + A + + DI++ +S Q +E Sbjct: 602 EQQKAHLISLRDITERKQIEKA-LSESEQRLE 632 Score = 102 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 66/367 (17%), Positives = 120/367 (32%), Gaps = 36/367 (9%) Query: 37 FNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKK 96 NPA E GY EE+I LI D R A I G E + + Sbjct: 168 LNPAWETTLGYSTEELISQPFIELIHPDEREAALTEIERLGRGQ----LTYHFENRYRTR 223 Query: 97 DGSKIWTRFALSKVSAEGKVYYLA--LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDP 154 +G+ W EG +Y +A + + E ++ L +DHL V V D Sbjct: 224 EGTYRWLTLTAVPYVEEGLIYAVAHDITKRKQTEAEIQQTRNFLQTMIDHLPLAVFVKDG 283 Query: 155 E----RHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQD 210 + I+ N+ ++FG +EA G + + + + + + Sbjct: 284 KPETFSQIILWNKTCEKIFGISATEAIGSTTFEHFSDSQAEFFYQKDRETFARRMPLEIP 343 Query: 211 EFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNI---LAAMCS 267 E + + K + P+YD Q L+ DITE ++ + + Sbjct: 344 EEEADSYSLGKRLLHTVKIPLYDEQDQPQYLLCISEDITERKRAEEALKKSEEQFRLVFQ 403 Query: 268 SPPF---------------HEMGEIICRNIESVLNESHVSLF---ALRNGMPIHWASSSH 309 P +++ +L + L L+N +P+H + Sbjct: 404 HSPIGIAIATPEGKLVRVNEAFSQMMGFTEAELLKRTCGDLTYPDDLKNEIPLHQKLLAG 463 Query: 310 GAEIQNAQSWSATIRQRDGAPAGILQI--KTSSGAETSAFIERVADISQHMAALALEQEK 367 + T ++ G+L + + + +V DIS+ A +E Sbjct: 464 EIAYYRLEKRYLT--KKGQVLYGMLHVGLIRDEQDKPLNLVGQVVDISEKTQAEIALRE- 520 Query: 368 SRQHIEQ 374 S + + Sbjct: 521 SEDRLSR 527 Score = 64.3 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 38/280 (13%), Positives = 72/280 (25%), Gaps = 34/280 (12%) Query: 119 LALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 + + D + + Q + + + + + N A+ GY E Sbjct: 129 IGVKTDVTEPKQAEIQRERFFTL---SLDLLCIAGFDGYFKCLNPAWETTLGYSTEELIS 185 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 L++ E A +++L E TR G W+ + P + Sbjct: 186 QPFIELIHPDEREA-ALTEIERLGRGQLTYHFENRYRTREGTYRWLTLTAVPYVEEG--- 241 Query: 239 QNLVMTFSDITEERQIR---QLEGNILAAMCSSPPF---------HEMGEII--CRNIES 284 + DIT+ +Q Q N L M P +II + E Sbjct: 242 -LIYAVAHDITKRKQTEAEIQQTRNFLQTMIDHLPLAVFVKDGKPETFSQIILWNKTCEK 300 Query: 285 VLNESHVSLFALR-----NGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKT- 338 + S + + + D G + T Sbjct: 301 IFGISATEAIGSTTFEHFSDSQAEFFYQKDRETFARRMPLEIPEEEADSYSLGKRLLHTV 360 Query: 339 -----SSGAETSAFIERVADISQHMAALALEQEKSRQHIE 373 + + DI++ A +KS + Sbjct: 361 KIPLYDEQDQPQYLLCISEDITERKRAEEA-LKKSEEQFR 399 >UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IR9_DECAR Length = 952 Score = 721 bits (1861), Expect = 0.0, Method: Composition-based stats. Identities = 190/693 (27%), Positives = 311/693 (44%), Gaps = 40/693 (5%) Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 K + +L + + PV V + + CN+AF + G G + Sbjct: 269 REMKLERSRLQALLSAIPDPVFVKNANGVFMSCNKAFERLLGAPEKSILGKTDYDFFDKD 328 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 +E+L G + + +P+Y + + DI Sbjct: 329 LADFFREKDRAATAAGRPLSNEEWLEFAADGYSGLFETTKTPLY-LDGQAIGTLGIAHDI 387 Query: 249 TEERQIRQLEGNILAAMCSSPP--FHEMGEIICRNIESVLNESHVSLFALRNGMPIHWAS 306 T ++I AA S + +I R ++ L ++ ++ P S Sbjct: 388 TRRKRIEADLRLAAAAFESQTAMLVTDANGVILRVNQAFLRDTGYAVEECVGQTPRILRS 447 Query: 307 SSH--------GAEIQNAQSWSATI--RQRDGA----PAGILQIKTSSGAETSAFIERVA 352 H I+++ W I R++DG+ I + SG E + +I Sbjct: 448 GRHDPAFYQKMWESIRSSGVWQGEIWDRRKDGSIYPKWLTISAVLGDSG-EVTHYIGLHQ 506 Query: 353 DISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYL 408 D+S E++ + I QL +D +TGLPNR L L ++ K + V+ Sbjct: 507 DVS--------ERKLAESRIHQLAYYDQVTGLPNRILLQERLSQVMAKCRASSNYGVLLF 558 Query: 409 IGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVS--- 465 + +D+ + + D+LG+ D L +V R + + R+ G +F ++ E Sbjct: 559 VDLDNFKTLNDTLGHNVGDLLLKQVGEVLRRCSRESDTVARLGGDEFAVIMSELGTDPSA 618 Query: 466 ---NITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGK--NRDYLLSTAHNAMDYIR 520 A L + + + + + T+SIG + G+ + + L+ A+ + Sbjct: 619 AMQGAEAAARYLLSELGRTFQLGNVIHRNTVSIGATLFKGEQESIESLMRQIDLAIYQAK 678 Query: 521 KNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALAR 580 G N +FF P+M ++ER + AL+ AI Q L YQ QI E G + G E L R Sbjct: 679 GAGRNTVRFFDPSMEIALRERAAIEEALRYAIEEEQFLLHYQAQI-GEDGRIEGAEVLLR 737 Query: 581 WHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN-IHIPALSVNLSAL 639 W P G V P+ FIPLAEE G+I +G WV+ +A QLA W + L+VN+SA+ Sbjct: 738 WQHPERGMVSPAIFIPLAEETGDIVLLGSWVLKQAAAQLARWAESPVMAGLVLAVNVSAV 797 Query: 640 HFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDF 699 R QV+ + G D +L +E+TESM++ ++Q L+ +G+G S+DDF Sbjct: 798 QLRQPDFVEQVTTVLREAGADPGRLKLELTESMLVNDVEATIAKMQSLKAIGIGFSLDDF 857 Query: 700 GTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETK 759 GTG+S LS L LP++++KID+SFV L + +A+ ++ ++ +SL L V+AEGVET+ Sbjct: 858 GTGYSSLSYLKRLPLSQLKIDQSFVRDVLVDANDVAIASSVVALAKSLGLGVIAEGVETE 917 Query: 760 EQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 Q E+L I C QGY FSRPLP + +S Sbjct: 918 AQRELLAGIGCHCYQGYLFSRPLPIGDFERLVS 950 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 83/249 (33%), Gaps = 6/249 (2%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 L + N N M N A E+L G + ++G +DL E Sbjct: 278 LQALLSAIPDPVFVKNANGVFMSCNKAFERLLGAPEKSILGKTDYDFFDKDLADFFREKD 337 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK-VYYLALVRDASVEMAQK 132 R G+ + E DG + + +G+ + L + D + + Sbjct: 338 RAATAAGRPLS---NEEWLEFAADGYSGLFETTKTPLYLDGQAIGTLGIAHDITRRKRIE 394 Query: 133 EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPA 192 R A + ++V D I++ N+AF GY + E G P L + PA Sbjct: 395 ADLRLAAAAFE-SQTAMLVTDANGVILRVNQAFLRDTGYAVEECVGQTPRILRSGRHDPA 453 Query: 193 DNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER 252 ++ + + + Q E + G +IS V + + + D++E + Sbjct: 454 -FYQKMWESIRSSGVWQGEIWDRRKDGSIYPKWLTISAVLGDSGEVTHYIGLHQDVSERK 512 Query: 253 QIRQLEGNI 261 + Sbjct: 513 LAESRIHQL 521 Score = 72.4 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 48/133 (36%), Gaps = 6/133 (4%) Query: 9 AADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPA 68 AD A ++ ++ + N ++ N A + GY EE +G +L PA Sbjct: 394 EADLRLAAAAFESQTAMLVTDANGVILRVNQAFLRDTGYAVEECVGQTPRILRSGRHDPA 453 Query: 69 HPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYLALVRDAS 126 + + + E+ +KDGS W + + +Y+ L +D S Sbjct: 454 FYQKMWESIRSSGV----WQGEIWDRRKDGSIYPKWLTISAVLGDSGEVTHYIGLHQDVS 509 Query: 127 VEMAQKEQTRQLI 139 + + QL Sbjct: 510 ERKLAESRIHQLA 522 >UniRef50_B7KJT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KJT7_CYAP7 Length = 812 Score = 721 bits (1861), Expect = 0.0, Method: Composition-based stats. Identities = 170/702 (24%), Positives = 313/702 (44%), Gaps = 41/702 (5%) Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 +E+ R L+ ++ D + +LD + I+ N + GY +E G Sbjct: 120 VESLRESEERYRLLVEGIE--DYGIFMLDGQGRIISWNLGAERIQGYQSTEIIGRHYSIF 177 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 + A ++ Q K R + E + G W +SPV+ L+ Sbjct: 178 FTTTDTSAKVPEKILQTALKQGRFKGEGWRRRKDGSLFWASIVLSPVFAQNRQLKGFAKI 237 Query: 245 FSDITEERQIRQLEGNIL------------AAMCSSPPFHEMGEIICRNIESVLNESHVS 292 DI+E +Q + +L +A+ + + + + S Sbjct: 238 TRDISERKQAEVQKNKLLKDLTDLKLALDQSAIVAVTNSQGIITAVNDQFCQISGYSKEE 297 Query: 293 LFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQIKT---SSGA 342 L + +G A I + W I R + G + + Sbjct: 298 LIGKTHRIINSGYHSKKFFQQLWATISQGKIWRGEICNRSKTGQFYWVATTIVPFLNQNN 357 Query: 343 ETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV 402 + + DI+Q ++ + + + + D +TGLPNR L L+ + +A Sbjct: 358 QPFQYFAIRFDITQ--------RKLAEKRLRHEVLHDSLTGLPNRTLLIQRLEQVRHRAK 409 Query: 403 S-----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVL 457 + I +D +++ D+LG+ D+ L+ + +R +E ++ + R+ G +F++ Sbjct: 410 RKANYCFALLFIDLDRFKNINDNLGHPIGDRVLITIASRLQECVRSLDTVARLGGDEFII 469 Query: 458 VSLENDVSNIT-QIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGK-NRDYLLSTAHNA 515 + E + +I + + ++ P++I+ + LT SIGI+++ + LL A A Sbjct: 470 LLDELEEEKEIFKIIERIEKQLTTPMVIEGQTLSLTASIGIAFNDTNLSNSDLLRNADLA 529 Query: 516 MDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGI 575 M ++ G G+ + M + L LK AI + L YQP + +T + G Sbjct: 530 MYRVKNEGKAGYAIYQSEMYAQAQALWELENHLKLAIERQEFLLYYQPILSLKTLTVIGF 589 Query: 576 EALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ--NIHIPALS 633 EAL RW P G + P FIP+AEE I IG WV+ ++C+QL+ WR + + ++ Sbjct: 590 EALIRWQHPQRGLISPVHFIPVAEETDLIVAIGEWVLQQSCQQLSAWREKYPQANHLTIN 649 Query: 634 VNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVG 693 VNLS + ++ + + G+ QL +EITE+++M + + L+ + Sbjct: 650 VNLSNRQLEKDNFVYKLDNVLQQTGLPATQLKLEITETLLMTNLAAAIATLSQLKQRNIN 709 Query: 694 LSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVA 753 +S+DDFGTG+S L+ L LPV+ +KID+SFV + + L +++ I S+G+ L + V+A Sbjct: 710 ISIDDFGTGYSSLNYLCRLPVSSLKIDRSFVANVHEDSKNLQIIQTILSLGEQLMIEVIA 769 Query: 754 EGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 EG+ET++ E L+++ C+ QGY FS+P+ E + + L Sbjct: 770 EGIETQKHLEQLQELGCQYGQGYLFSKPVNCEAAEQLICAGL 811 Score = 142 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 52/307 (16%), Positives = 108/307 (35%), Gaps = 18/307 (5%) Query: 2 KLTDADNAADGIFFPALEQNMM-GAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 ++ ++ ++ + +E G +++ ++ +N AE++ GY+ E+IG + + Sbjct: 118 QIVESLRESEERYRLLVEGIEDYGIFMLDGQGRIISWNLGAERIQGYQSTEIIGRHYSIF 177 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YY 118 A + + E +KDGS W LS V A+ + + Sbjct: 178 FTTTDTSA---KVPEKILQTALKQGRFKGEGWRRRKDGSLFWASIVLSPVFAQNRQLKGF 234 Query: 119 LALVRDASVEMAQKEQTRQLIIAVDHLDRP------VIVLDPERHIVQCNRAFTEMFGYC 172 + RD S + Q +L+ + L V V + + I N F ++ GY Sbjct: 235 AKITRDISERKQAEVQKNKLLKDLTDLKLALDQSAIVAVTNSQGIITAVNDQFCQISGYS 294 Query: 173 ISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVY 232 E G ++N +L + + + E ++TG+ W+ +I P Sbjct: 295 KEELIGKT-HRIINSGYHSKKFFQQLWATISQGKIWRGEICNRSKTGQFYWVATTIVPFL 353 Query: 233 DVLAHLQNLVMTFSDITEERQIRQL-----EGNILAAMCSSPPFHEMGEIICRNIESVLN 287 + DIT+ + + + L + + + E + + N Sbjct: 354 NQNNQPFQYFAIRFDITQRKLAEKRLRHEVLHDSLTGLPNRTLLIQRLEQVRHRAKRKAN 413 Query: 288 ESHVSLF 294 LF Sbjct: 414 YCFALLF 420 >UniRef50_C7RQ11 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQ11_9PROT Length = 978 Score = 721 bits (1861), Expect = 0.0, Method: Composition-based stats. Identities = 192/720 (26%), Positives = 321/720 (44%), Gaps = 43/720 (5%) Query: 113 EGKVYYLALVRDASVEMAQKE-------QTRQLIIAVDHLDRPVIVLDPERHIVQ---CN 162 + ++ DA+ + ++ T + + + + + + Sbjct: 126 DDPASLAGVIEDAARQARFRQESSSVRPATTHRQLVLSAGPTVLYACGVDGQSLVPLWVS 185 Query: 163 RAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKI 222 T + + +E A +LL + Q E+ G Sbjct: 186 DNITRVLHFSPAECLAPDWWVSHVHDADRAHVLETWPRLLADGSLLQ-EYRFRDGQGVVR 244 Query: 223 WIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNI 282 W++ ++D +V + D+T + + + A+ S+ + ++ R I Sbjct: 245 WLRDHKRLLFDANHQPLAVVGNWDDVTAGHALAERQRLHATALESTRDGVLIADLTGRII 304 Query: 283 ---ESVLNESHVSLFALRNGMPIHWASSSH--------GAEIQNAQSWSATI--RQRDGA 329 + + + P S H A + A W + R+ DG Sbjct: 305 SVNPAFSEMTGYTAAEAIGRNPRLLQSGRHDRAFYQAMWASLTQAGHWQGELWNRRADGE 364 Query: 330 PAG---ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPN 386 L + + + ++ D+S+ + + +E L +DP+T LPN Sbjct: 365 IYPQWATLSVVKDEHGQPTHYLAVFTDLSK--------LKHREEELEHLAHYDPLTDLPN 416 Query: 387 RNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLK 442 R L + L +++A V +I +D ++V DSLG+A D+ LL V R + +L+ Sbjct: 417 RLLLRSLLQHALERAQRQGGKSAVLVINLDQFKNVNDSLGHALGDELLLGVTARLKARLR 476 Query: 443 PDQYLCRIEGTQFV-LVSLENDVSNITQIADELRNVVSKPIMI-DDKPFPLTLSIGISY- 499 + + R+ +FV ++ D N IA +L ++ P ++ D SIGIS Sbjct: 477 HEDVVGRLGADEFVAILEASQDAENAGSIAGDLLAALAPPFVLADGHETYARASIGISVF 536 Query: 500 -DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLK 558 GK + LL +A AM ++ GGN + F++ + +RL + AL+ A+ +L Sbjct: 537 PQDGKGANDLLRSADVAMHRAKQRGGNQYAFYTGELGHGALQRLEMETALRRALIQGELV 596 Query: 559 LVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQ 618 L YQP++ +G + G EAL RW P G VPP RFIPLAEE G I IG WVI E CRQ Sbjct: 597 LHYQPKLDLASGVIVGGEALLRWQRPGFGLVPPYRFIPLAEETGLIVPIGAWVINETCRQ 656 Query: 619 LAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDT 678 + W ++VN+SA F +L ++ A+ +D L +E+TESM+M Sbjct: 657 IRAWAEAGQPSVMVAVNVSARQFAGGELEAVLATALRKHAVDPRMLGLELTESMLMAAPE 716 Query: 679 EIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLE 738 + +R+ LR +GV +++DDFGTG+S LS L PV E+KID+SF+ +++ + + Sbjct: 717 QATERLDALRRVGVAVALDDFGTGYSSLSYLSRFPVDELKIDRSFITHIVSDPKAANIAT 776 Query: 739 AITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLK 798 A+ ++ + L VVAEGVET+ Q LRK C IQGY FS P+PA+E +S L Sbjct: 777 AVIALAHRMALKVVAEGVETETQLSYLRKNRCDQIQGYLFSAPVPADEFATLVSQGKCLP 836 Score = 78.2 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 6/138 (4%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A + ALE G ++ + ++ NPA ++ GY E IG N +L Sbjct: 275 ALAERQRLHATALESTRDGVLIADLTGRIISVNPAFSEMTGYTAAEAIGRNPRLLQSGR- 333 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYLALVR 123 H + EL + DG W ++ K +YLA+ Sbjct: 334 ---HDRAFYQAMWASLTQAGHWQGELWNRRADGEIYPQWATLSVVKDEHGQPTHYLAVFT 390 Query: 124 DASVEMAQKEQTRQLIIA 141 D S ++E+ L Sbjct: 391 DLSKLKHREEELEHLAHY 408 >UniRef50_Q2RRN9 Sensor protein n=3 Tax=Proteobacteria RepID=Q2RRN9_RHORT Length = 1301 Score = 720 bits (1860), Expect = 0.0, Method: Composition-based stats. Identities = 193/697 (27%), Positives = 312/697 (44%), Gaps = 34/697 (4%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 + +M +E + + + LDP+ H ++ N ++ GY E + Sbjct: 612 IADHRRKQMVLRESEARFRATFEQAAVGIAHLDPDGHWLRVNHKLCDIVGYPPDELLTLS 671 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 + + + AD R L + E + +TGE +WI ++S V D+ Sbjct: 672 FQDITHPDDLRADLRQMEALLAGQIDTYTIEKRYIRKTGESLWINLTVSLVRDIHNAPAY 731 Query: 241 LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI---ICRNIESVLNESHVSLFALR 297 + +I ++ A +S + ++ I + + + Sbjct: 732 FISVVENIQSRKEAELQLLLASAVFSNSMEGIFVTDLKGSILAVNPAFSQITLYEAAEVL 791 Query: 298 NGMPIHWASSSHGAEIQ--------NAQSWSATI--RQRDGA----PAGILQIKTSSGAE 343 S E SW I R+RDG I ++ G E Sbjct: 792 GRNARILQSGRQNREFYVALWQDVLTIGSWRGEIWNRRRDGEVFPEWLSISSVRNHQG-E 850 Query: 344 TSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS 403 + +I +D+S+ + S L DP+TGLPNR L + LD +++A Sbjct: 851 VTNYIGIFSDLSRI--------KHSEAKFHHLAHHDPLTGLPNRLLLRSRLDHAIERARR 902 Query: 404 P----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFV-LV 458 V + +D + + DSLG+ D L + R L L R+ G +FV ++ Sbjct: 903 TGGRCAVLFLDLDRFKMINDSLGHRAGDTLLRTLGARLTACLGDTGTLARLGGDEFVAVI 962 Query: 459 SLENDVSNITQIADELRNVVSKPIMI-DDKPFPLTLSIGISY--DLGKNRDYLLSTAHNA 515 + + + IA + + +P + + + S+GIS + G N D LL A A Sbjct: 963 EDIDGIPAVGTIALTMLERLREPCRLSEGPEVCIGGSVGISLFPEDGDNPDTLLQHADTA 1022 Query: 516 MDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGI 575 + ++ GG + F++ + E + RL L A L+ A+ L YQP I TGE+ G+ Sbjct: 1023 LGQVKGAGGGAYGFYTRTLTERISARLGLEAGLRHALEQGDFLLHYQPLIALGTGEVEGV 1082 Query: 576 EALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVN 635 EAL RW +PP RFIPLAE+ G I +G WV+ EACR + WRSQ + + L+VN Sbjct: 1083 EALVRWAGGDGLLIPPDRFIPLAEDTGLIVPLGEWVLGEACRTMQRWRSQGMPLTVLAVN 1142 Query: 636 LSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLS 695 LS FR + +P V + G+ L +EITES +ME ++ L+ +GV L+ Sbjct: 1143 LSPRQFRDHAIPALVRRVLEQTGLPASVLELEITESAIMEQGAAAEAQMTGLKHLGVRLA 1202 Query: 696 VDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEG 755 +DDFGTG+S L+ L P+ +IKID+SFV + + I ++G++L L V+AEG Sbjct: 1203 IDDFGTGYSSLANLRRFPIDKIKIDQSFVRDIPRDAAAEEITATIIAMGRTLKLHVLAEG 1262 Query: 756 VETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 VET +Q + L + C QGY FSRP+ A + W++ Sbjct: 1263 VETTDQLDFLSRKQCDSAQGYLFSRPITAAALEKWLA 1299 Score = 157 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 96/260 (36%), Gaps = 8/260 (3%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNI-DMLIPRDLR 66 ++ F EQ +G ++ + + N + GY +E++ + D+ P DLR Sbjct: 623 RESEARFRATFEQAAVGIAHLDPDGHWLRVNHKLCDIVGYPPDELLTLSFQDITHPDDLR 682 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA--EGKVYYLALVRD 124 +R +++ + E + +K G +W +S V Y++++V + Sbjct: 683 A----DLRQMEALLAGQIDTYTIEKRYIRKTGESLWINLTVSLVRDIHNAPAYFISVVEN 738 Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 + Q + + V D + I+ N AF+++ Y +E G + Sbjct: 739 IQSRKEAELQLLLASAVFSNSMEGIFVTDLKGSILAVNPAFSQITLYEAAEVLGRNA-RI 797 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 L + + L Q + + E R GE SIS V + + N + Sbjct: 798 LQSGRQNREFYVALWQDVLTIGSWRGEIWNRRRDGEVFPEWLSISSVRNHQGEVTNYIGI 857 Query: 245 FSDITEERQIRQLEGNILAA 264 FSD++ + ++ Sbjct: 858 FSDLSRIKHSEAKFHHLAHH 877 >UniRef50_B1XYS1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XYS1_LEPCP Length = 784 Score = 720 bits (1860), Expect = 0.0, Method: Composition-based stats. Identities = 203/739 (27%), Positives = 338/739 (45%), Gaps = 66/739 (8%) Query: 126 SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 + + L D +V + I + + + G ++ G +P+ +L Sbjct: 33 TPRTDRSALLPALTRLFDDGPCAALVCGADGRITEVSDSCGRWLGLAAADLLGRRPEQVL 92 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 P RLQ + R E L+ G +W + + ++T Sbjct: 93 AGPGATIPGWERLQDQARRHGRAGTEALVHGHGGRPLWCTLVLDALPAAQGEPDTWLLTL 152 Query: 246 SDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRN------- 298 +DIT++R + +L+G +L A+ P E+ ++C ++ + + ++ + + Sbjct: 153 ADITQQRILTELQGPVLGALVRDRPLAEVMALVCTQVQILAPDVVATVLGVDDDGLIRPL 212 Query: 299 --------------GMPIHWASSSHGAEIQNAQ--------------------------- 317 G PI + S G Sbjct: 213 AGPSIPAEVSCQFDGAPIGPKAGSCGTAAWRGSPVVVTDIDTDPLWDDYRHVVQPLGLRA 272 Query: 318 SWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQ 377 WS+ I+ +G E++ ++S H+ LALE+E+S HI QL Sbjct: 273 CWSSPIKNGEGRVLATFAFYFREPRAPHGLHEQLVEMSVHLCTLALERERSHAHIHQLAY 332 Query: 378 FDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEV 433 +D +TGLPNR L L + +A + I +D +DV DS G+A D+ L EV Sbjct: 333 YDGLTGLPNRALLQANLARAITQAQQDGTTLALLFIDLDRFKDVNDSHGHAVGDELLREV 392 Query: 434 VNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTL 493 R +++ +CR+ G +FV+V V A+ ++ +++PI + D Sbjct: 393 AQRLAGEVRDRSLVCRLAGDEFVVVLPHCGVEQARHTAERVQQALARPITVGDLDLTTGA 452 Query: 494 SIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEA 551 +G++ D G + D LL A AM +K+G G F+ MN ++RL L A L+ A Sbjct: 453 CLGVAMYPDDGSDLDRLLRHADAAMYQAKKDGRGGLHFYRAEMNRAAEDRLRLAADLRAA 512 Query: 552 ISNNQLKLVYQPQIFA------------ETGELYGIEALARWHDPLHGHVPPSRFIPLAE 599 + L+L +QPQ+ + L+G+EAL RW P+ G V P RFIP+AE Sbjct: 513 LHRGGLQLHFQPQVCPPGKTPRSPAAGPASMSLFGVEALLRWRHPVLGDVSPERFIPVAE 572 Query: 600 EIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGI 659 E G ++ + WV+ AC QLA WR+ I +P ++VNLS +F+ LP +V + G+ Sbjct: 573 EAGLMDELSNWVLEAACAQLAGWRADGIDVPRVAVNLSPRNFQDPGLPARVRQLLDRHGL 632 Query: 660 DGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKI 719 G QLT+E+TES ++ + +++ L+ +GVGL++DDFG G S LS L LP+ ++K+ Sbjct: 633 RGDQLTLELTESAWIDRRADSLDKLRALQALGVGLAMDDFGNGQSSLSHLHRLPLRQLKL 692 Query: 720 DKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFS 779 D+SFV L A+ IG+SL L VVAEG+ET Q L + C V+QG ++ Sbjct: 693 DRSFVHDIEHLAVAQTLAAAMLHIGESLGLIVVAEGIETAAQAAFLIEHGCPVLQGDRYA 752 Query: 780 RPLPAEEIPGWMSSVLPLK 798 + + AE+I W++ + + Sbjct: 753 QSMAAEQIGPWLAGLASMA 771 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 720 bits (1859), Expect = 0.0, Method: Composition-based stats. Identities = 173/531 (32%), Positives = 276/531 (51%), Gaps = 25/531 (4%) Query: 279 CRNIESVLNESHVSLFALRNGMPIHWASSSHGAE-----IQNAQSWSATIR--QRDGAPA 331 R + SH + L + + G E +++ S A +R ++DG+ Sbjct: 365 NRAFSIMTGYSHDEIIGLSPRFLLANDLAQPGLERLRNCMRHGGSARAILRNYRKDGSLF 424 Query: 332 G---ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRN 388 L + E + FI D++ ++++ +E D +TGLPNRN Sbjct: 425 WNEVALAAVHNEHGEIAHFISVFNDVT--------DRKRYEAALEYQANHDDLTGLPNRN 476 Query: 389 NLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPD 444 L + L+ + KA V L+ +D + V D LG+ D + V +R + ++ Sbjct: 477 LLRDRLEHAITKATREHTKLAVLLLDLDQFKRVNDGLGHKIGDTLIQRVASRMSQCVRDS 536 Query: 445 QYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--L 501 + R+ G +F+++S + D +A +L + + I+ + SIGI+ Sbjct: 537 DTVARLGGDEFMILSTDIRDERAAATLAQKLLRQFRQKVAINGHEIIASASIGIAMFPKD 596 Query: 502 GKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVY 561 G N D L A AM + G NG+QF+S MN ++ERL L +L+ AI +QL L Y Sbjct: 597 GDNGDELFRNADTAMYRAKDVGRNGFQFYSAEMNNRMRERLYLEQSLRNAIGLHQLSLWY 656 Query: 562 QPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAE 621 QP++ +G + EAL RW P G + P FIP+AEE G I IG WVI EA RQLA+ Sbjct: 657 QPKLDLASGSVKSAEALIRWRHPQLGMISPGDFIPIAEETGLILPIGAWVIEEASRQLAK 716 Query: 622 WRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIF 681 WR Q +++N+SA +L +QV A+ + G+D LT+E+TE+ +M + Sbjct: 717 WRDQENQDIRVAINISAYQLSHGKLTDQVIQALDSLGLDPQSLTIEVTETAIMPQMDKAV 776 Query: 682 KRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAIT 741 +Q LR+MG+ +++DDFGTG+S L+ L P+ +KID+SFV ++ A+++ I Sbjct: 777 CELQSLREMGIRVALDDFGTGYSSLTYLKRFPIDILKIDRSFVSDIADDEESGAIVKTII 836 Query: 742 SIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 ++ +LN+TVVAEGVET+ Q E LR C +QGY+F +PLP+EE ++ Sbjct: 837 NLAHNLNMTVVAEGVETEAQLEFLRTNGCDEVQGYYFCKPLPSEECLEFLR 887 Score = 87.4 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 53/129 (41%), Gaps = 5/129 (3%) Query: 131 QKEQTRQLIIAVDHLDRPVIVL----DPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 + + + A++ +++ + ++ NRAF+ M GY E G+ P LL Sbjct: 330 RARKLQLYDRAIEESSNGIVICLADKTRDNPVIYANRAFSIMTGYSHDEIIGLSPRFLL- 388 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 + RL+ + + + G W + +++ V++ + + + F+ Sbjct: 389 ANDLAQPGLERLRNCMRHGGSARAILRNYRKDGSLFWNEVALAAVHNEHGEIAHFISVFN 448 Query: 247 DITEERQIR 255 D+T+ ++ Sbjct: 449 DVTDRKRYE 457 Score = 72.0 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 82/218 (37%), Gaps = 41/218 (18%) Query: 12 GIFFPALEQNMMGAVLI----NENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP 67 ++ A+E++ G V+ ++ V++ N A + GY +E+IG + L+ DL Sbjct: 335 QLYDRAIEESSNGIVICLADKTRDNPVIYANRAFSIMTGYSHDEIIGLSPRFLLANDLAQ 394 Query: 68 AHPEYIRHN-REGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRD 124 E +R+ R GG AR L+ +KDGS W AL+ V E +++++ D Sbjct: 395 PGLERLRNCMRHGGSARAI-----LRNYRKDGSLFWNEVALAAVHNEHGEIAHFISVFND 449 Query: 125 ASVEMAQKEQTRQLI------------------------IAVDHLDRPVIVLDPERHIVQ 160 + + +H V++LD + + Sbjct: 450 VTDRKRYEAALEYQANHDDLTGLPNRNLLRDRLEHAITKATREHTKLAVLLLDLD-QFKR 508 Query: 161 CNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRL 198 N G+ I + + + ++ +D RL Sbjct: 509 VNDG----LGHKIGDTLIQRVASRMSQCVRDSDTVARL 542 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 720 bits (1859), Expect = 0.0, Method: Composition-based stats. Identities = 184/639 (28%), Positives = 300/639 (46%), Gaps = 38/639 (5%) Query: 169 FGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASI 228 G+ G ++ P + + Q + A + G + + + Sbjct: 205 LGFPNGSVRGAVGVSVPMQPYQAMEGQAIRIQAISHGAFWLVGVAGILLIGRRSAGRLTE 264 Query: 229 SPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAA--MCSSPPFHEMGEIICRNIESVL 286 + D L FS+ E I +G IL M + + E++ N + Sbjct: 265 KALADEETRLAAH--VFSNALEATLITDPKGRILRINPMFTELTGYGEAEVVGGNPRIIR 322 Query: 287 NESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDG----APAGILQIKTSS 340 + H + F + I W I R++DG A I+ + + Sbjct: 323 SNHHDADF-----------YAEIWQAIFRDGRWQGEIWNRRKDGQVFVAWESIVAVYDEA 371 Query: 341 GAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLD----D 396 GA FI DI+ EQ ++++HI +L +D +T LPNR + L+ Sbjct: 372 GA-IRYFIGSFRDIT--------EQVEAQRHILRLAHYDVLTDLPNRVLFQDRLERAVVH 422 Query: 397 LVDKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF- 455 + + + +D + V D++G+ D L EV R R ++ + R+ G +F Sbjct: 423 ALRHDRQAALLFLDLDGFKKVNDTMGHRAGDDLLKEVAVRLRGCVRMTDTIARLGGDEFT 482 Query: 456 VLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAH 513 V++ + ++ + +AD++ + PI ID + + SIGIS G + D LL A Sbjct: 483 VILDEISAANDASMVADKILASLHAPIFIDGRDVFIGTSIGISLFPIDGTSGDELLKHAD 542 Query: 514 NAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELY 573 AM + G + F+S M + + RL L AL++A+ Q ++ YQPQ T + Sbjct: 543 TAMYQAKAAGKGRFNFYSAEMTKREEHRLELETALRQAVEEGQFQVHYQPQKNLATNRVS 602 Query: 574 GIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALS 633 G EAL RW P G + P FIPLAEE+ I+ I +V+ +ACR+ +WR Q ++ Sbjct: 603 GFEALVRWQHPRLGMISPVDFIPLAEEMHLIDRIDMFVMRQACRKGRQWRDQGYD-ICMA 661 Query: 634 VNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVG 693 VNLS ++F + LP QV + G L +EITES +++ + + + +Q LR +GV Sbjct: 662 VNLSGVNFSRDDLPEQVRQVLEDTGFPAENLELEITESFVIDLEVDQREVLQRLRALGVK 721 Query: 694 LSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVA 753 L++DDFGTG+S LS L LPV +KID+SFV + R + L+ +I I SL L VVA Sbjct: 722 LAIDDFGTGYSSLSYLKRLPVNTLKIDRSFVRDIARDSRDMMLVSSIIGIAHSLGLKVVA 781 Query: 754 EGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 EG+E ++Q +L C IQGY ++P+PAE+ +++ Sbjct: 782 EGIEERDQLAILLSQECDEIQGYLIAKPMPAEQAGIFLN 820 Score = 110 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 57/284 (20%), Positives = 110/284 (38%), Gaps = 26/284 (9%) Query: 16 PALEQNMMGAVLINENDEVMFFNPAAEKLW--GYKREEVIGNNID----------MLIPR 63 ++ ++G V +N N+E + A + + G E++ + I L+ Sbjct: 137 YGIKGRIVGIVTLNPNNEADAWEAEAIRQFSAGTMSEKLELSTIGDKPYLRLIKPFLMEE 196 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKK-DGSKIWTR-FALSKVSAEGKVYYLAL 121 + H N G G+S +Q + +G I + + G L + Sbjct: 197 SCQKCHGHLGFPN--GSVRGAVGVSVPMQPYQAMEGQAIRIQAISHGAFWLVGVAGILLI 254 Query: 122 VRDA----SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 R + + + E+TR + ++ DP+ I++ N FTE+ GY +E Sbjct: 255 GRRSAGRLTEKALADEETRLAAHVFSNALEATLITDPKGRILRINPMFTELTGYGEAEVV 314 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 G P ++ AD + Q +++ R Q E + G+ SI VYD Sbjct: 315 GGNP-RIIRSNHHDADFYAEIWQAIFRDGRWQGEIWNRRKDGQVFVAWESIVAVYDEAGA 373 Query: 238 LQNLVMTFSDITEERQ-----IRQLEGNILAAMCSSPPFHEMGE 276 ++ + +F DITE+ + +R ++L + + F + E Sbjct: 374 IRYFIGSFRDITEQVEAQRHILRLAHYDVLTDLPNRVLFQDRLE 417 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 720 bits (1859), Expect = 0.0, Method: Composition-based stats. Identities = 174/551 (31%), Positives = 264/551 (47%), Gaps = 31/551 (5%) Query: 250 EERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSH 309 E + IL+ + + E V+ + L +G + Sbjct: 315 EGVMVTDAHARILSVNPA------FTRMTGYAPEEVVGLNPS---VLNSGRQSPAFYARM 365 Query: 310 GAEIQNAQSWSATI--RQRDGAPAG----ILQIKTSSGAETSAFIERVADISQHMAALAL 363 + W + R++ G I I+ G + + DIS+ Sbjct: 366 WDGLLGDGQWQGEVWNRRKTGEVYPQLLHITAIRDREGV-LTHYAALFTDISR------- 417 Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVID 419 +++ I L +DP+TGLPNR L + L + A V + +D + + D Sbjct: 418 -LKETEARIRDLAYYDPLTGLPNRRLLDDRLQVELAHAARLRCRLAVMFVDLDRFKRIND 476 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLENDVSNITQIADELRNVV 478 SLG+A D+ L+E+ R R L+ D + R+ G +F V+++ + +A + + Sbjct: 477 SLGHAVGDKLLVEIAARLRASLRDDDTVARMGGDEFLVVLNNLSGPDEAATMARRMVAEL 536 Query: 479 SKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNE 536 +P+ ++ + +T S+G++ D ++ D L+ A AM + G N +Q F PAMN Sbjct: 537 RRPVNVEGRELVVTTSVGVAVYPDDSRDADTLVKHADVAMYRAKDEGRNSFQLFEPAMNA 596 Query: 537 MVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIP 596 ERL L AL A+ ++L+L +QP + AE GEL +EAL RW P G V P+ FIP Sbjct: 597 RSLERLALETALHRALPRDELQLYFQPVMKAEGGELVAVEALLRWRHPDLGLVSPADFIP 656 Query: 597 LAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHA 656 LAE+ G I IG WV+ AC W + VN+SA FR V + Sbjct: 657 LAEDTGLIVPIGEWVLRSACEHHRRWCEAGGAPLHMMVNISARQFREEGFAAMVGSVLAE 716 Query: 657 WGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTE 716 G+ LT+E+TESM+M+ R+ LR +GV L++DDFGTG+S L+ L P+ E Sbjct: 717 TGMTPGDLTLELTESMLMDDTDRALARLDHLRALGVCLAIDDFGTGYSSLAYLKRFPIDE 776 Query: 717 IKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGY 776 +KID+ FV R AL+ AI S+G SL L VVAEGVET ++LR+ C + QG+ Sbjct: 777 LKIDRLFVRGIDRNTRDAALVSAIVSLGHSLGLRVVAEGVETAAHLDVLRRQGCDLAQGF 836 Query: 777 FFSRPLPAEEI 787 FS PLP EE Sbjct: 837 HFSPPLPWEEF 847 Score = 107 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 72/217 (33%), Gaps = 29/217 (13%) Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSKIWTRF--------ALSKVSAEGKVYYLALVRD 124 + R +A E SR L + D S R + + EG++ L +D Sbjct: 213 LVAQRTADRALGELASRPLVTCRADDSLYRVRMLLAERHIRHIGVLDGEGELVDLVSFKD 272 Query: 125 AS--------------------VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRA 164 A + ++ V+V D I+ N A Sbjct: 273 ILSGMELAYVHELHDALRARDLALSASQRDLYLAEKVIESSLEGVMVTDAHARILSVNPA 332 Query: 165 FTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWI 224 FT M GY E G+ P L + + PA R+ L + Q E +TGE Sbjct: 333 FTRMTGYAPEEVVGLNPSVLNSGRQSPA-FYARMWDGLLGDGQWQGEVWNRRKTGEVYPQ 391 Query: 225 KASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNI 261 I+ + D L + F+DI+ ++ ++ Sbjct: 392 LLHITAIRDREGVLTHYAALFTDISRLKETEARIRDL 428 Score = 69.7 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 61/150 (40%), Gaps = 16/150 (10%) Query: 2 KLTDADNAAD--------GIFFP--ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREE 51 +L DA A D ++ +E ++ G ++ + + ++ NPA ++ GY EE Sbjct: 284 ELHDALRARDLALSASQRDLYLAEKVIESSLEGVMVTDAHARILSVNPAFTRMTGYAPEE 343 Query: 52 VIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS 111 V+G N +L PA + + G + +G E+ +K G ++ + Sbjct: 344 VVGLNPSVLNSGRQSPAFYARM-WDGLLGDGQWQG---EVWNRRKTGEVYPQLLHITAIR 399 Query: 112 AEGKV--YYLALVRDASVEMAQKEQTRQLI 139 V +Y AL D S + + R L Sbjct: 400 DREGVLTHYAALFTDISRLKETEARIRDLA 429 >UniRef50_Q60A84 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q60A84_METCA Length = 810 Score = 719 bits (1856), Expect = 0.0, Method: Composition-based stats. Identities = 202/806 (25%), Positives = 357/806 (44%), Gaps = 54/806 (6%) Query: 18 LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNR 77 LEQ+ G V V+ +P E ++G + ++ I + P + Sbjct: 25 LEQHPDGHV------TVVHADPGMEDMFGAEPGRLL---HAAGIEASMWPEDRRRAEPRQ 75 Query: 78 EGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS-AEGKVYYLALVRDASVEMAQKEQTR 136 E + + E +E W + ++G + + + D + + Q Sbjct: 76 ETAQRGPMPLRTEFPVEHPVRGPRWLELSAVPEPLSDGAIRWHGFLTDVTERRQAEVQAG 135 Query: 137 QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRI 196 + A+DHL V + + E V N A+ + GY E + ++ P+ + + Sbjct: 136 LVGKALDHLAEMVSICNAEGRFVYVNEAWRKALGYRGEEFLNLSVAEVV--PDLGSRSWA 193 Query: 197 RLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIR- 255 + + + Q E + TR G ++ + + Y ++ D ++ Sbjct: 194 GHFREIREKTSAQWETIHRTRDGHRVPV--VVDARYLEHEGCGYVLALVRDTRLLKRTDT 251 Query: 256 ---QLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAE 312 + E + +SP + CR + LN S + I + Sbjct: 252 ALLRREREFRSLAENSPDSIMRYDRDCRIV--YLNPSLENTLLFSASDMIGRTPTELHPG 309 Query: 313 IQNAQSWSATIRQR-------------DGAPAGI------LQIKTSSGAETSAFIERVAD 353 + +++ + +R G G L + E + + D Sbjct: 310 DERFETYESKLRAVVATGKADEIELLLQGTHKGPRLLHIRLVAEHDPDGECTGVLAVGRD 369 Query: 354 ISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV----DKAVSPVVYLI 409 I+ E ++ R+ I++L FDP+T LPNR L++ + + + + L+ Sbjct: 370 IT--------EVDEYRRRIQRLAFFDPLTDLPNRALLNDRIRQCLTDAAARGSQFGLMLL 421 Query: 410 GVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLENDVSNIT 468 +D ++V D+LG++ D+ L E R ++ + R+ G +F +L+ + D ++ Sbjct: 422 DLDRFKEVNDTLGHSAGDRLLCEAARRLNACVRGYDTVARLGGDEFSILLPVVRDRGDLR 481 Query: 469 QIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNG 526 IA + + +I+ K +++SIGI + + D L A AM + ++ G N Sbjct: 482 AIAGRILEAFGEAFIIEGKELFVSVSIGIVLHMEGQCDADRLFKQADLAMYHAKRQGRNN 541 Query: 527 WQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLH 586 +QF++ + V +R + AL++A+ N +L+L YQPQ+ G + G EAL RW P Sbjct: 542 FQFYAEELAVQVSDRTAMEGALRKALGNGELELYYQPQVALPAGRIVGAEALLRWRHPQE 601 Query: 587 GHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQL 646 G + P RFIP+AEE G I ++G WV+ ACR+ W ++VNLS F N L Sbjct: 602 GIMTPDRFIPIAEETGLIRDLGHWVLTTACRRAVYWHRTVDSPFKVAVNLSTRQFVRNDL 661 Query: 647 PNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGL 706 P ++ + G L +EITES+++ +D E+ ++ L DMG +S+DDFGTG+S L Sbjct: 662 PGELQRIVQDTGCRPEWLELEITESLLLGNDAEVGAALEELHDMGFAISIDDFGTGYSAL 721 Query: 707 SRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLR 766 S L P+ +IKID+SF+ ++ + L++AI SI +L L V+AEGVET Q E L Sbjct: 722 SYLNRFPLDQIKIDRSFIQGFPADREKVELVKAIISIAGALQLEVIAEGVETSHQAEYLH 781 Query: 767 KIHCRVIQGYFFSRPLPAEEIPGWMS 792 CR+ QG+ F RPLP + ++ Sbjct: 782 AQGCRLAQGHLFGRPLPQDRFERLLA 807 Score = 115 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 93/254 (36%), Gaps = 9/254 (3%) Query: 12 GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPE 71 G+ AL+ + N ++ N A K GY+ EE + ++ ++P + Sbjct: 135 GLVGKALDHLAEMVSICNAEGRFVYVNEAWRKALGYRGEEFLNLSVAEVVPDLGSRSWAG 194 Query: 72 YIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDA----SV 127 + R RE A+ E + +DG ++ + EG Y LALVRD Sbjct: 195 HFREIREKTSAQWETI-----HRTRDGHRVPVVVDARYLEHEGCGYVLALVRDTRLLKRT 249 Query: 128 EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI 187 + A + R+ ++ ++ D + IV N + + S+ G P L Sbjct: 250 DTALLRREREFRSLAENSPDSIMRYDRDCRIVYLNPSLENTLLFSASDMIGRTPTELHPG 309 Query: 188 PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSD 247 E +L+ ++ D+ E LL + + +D ++ D Sbjct: 310 DERFETYESKLRAVVATGKADEIELLLQGTHKGPRLLHIRLVAEHDPDGECTGVLAVGRD 369 Query: 248 ITEERQIRQLEGNI 261 ITE + R+ + Sbjct: 370 ITEVDEYRRRIQRL 383 Score = 51.6 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 80/249 (32%), Gaps = 16/249 (6%) Query: 1 MKLTD-ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDM 59 +K TD A + F E + + + + +++ NP+ E + ++IG Sbjct: 246 LKRTDTALLRREREFRSLAENSPDSIMRYDRDCRIVYLNPSLENTLLFSASDMIGRTPTE 305 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL 119 L P D R E + + + LQ K + R L Sbjct: 306 LHPGDERFETYESKLRAVVA-TGKADEIELLLQGTHKGPRLLHIRLVAEHDPDGECTGVL 364 Query: 120 ALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIVQCNRAFTEMFGY------ 171 A+ RD + + + ++L + L ++ D R + A FG Sbjct: 365 AVGRDITEVDEYRRRIQRLAFFDPLTDLPNRALLNDRIRQCLTDAAARGSQFGLMLLDLD 424 Query: 172 ---CISEASGMQP-DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLL--LTRTGEKIWIK 225 +++ G D LL + +R + + D+ LL + G+ I Sbjct: 425 RFKEVNDTLGHSAGDRLLCEAARRLNACVRGYDTVARLGGDEFSILLPVVRDRGDLRAIA 484 Query: 226 ASISPVYDV 234 I + Sbjct: 485 GRILEAFGE 493 >UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCL1_NITMU Length = 1054 Score = 719 bits (1856), Expect = 0.0, Method: Composition-based stats. Identities = 176/716 (24%), Positives = 299/716 (41%), Gaps = 60/716 (8%) Query: 114 GKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCI 173 K LA+ + + ++ + LD E N+ + Sbjct: 355 NKKLLLAMEEQQATTRELSNAKLRTERILESITDAFYTLDREWRFTYVNKEAENLLQRNR 414 Query: 174 SEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYD 233 + G +R + L+ +EF + W + P Sbjct: 415 EDLLGRVCWEEFKETAGTTFDREYHRALMENRTVTFEEFYVPLDE----WFEVHAYP--- 467 Query: 234 VLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMG-------------EIICR 280 + L + F DITE ++ Q + + E + Sbjct: 468 ---SEEGLTVYFRDITERKESEQARQEAHVRIRQQASLLDKATDAIIVFGMDNCIEFWNQ 524 Query: 281 NIESVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGI 333 E + + + L + + + ++ + ++ W + R+RD + + Sbjct: 525 GAERLYGWTSEEVMGREVEMLYDNVAVFDEANR---ALLSSGEWRGELAQRRRDQSMLNV 581 Query: 334 ---LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNL 390 + + E A DI+Q ++ + I L +D +TGLPNR L Sbjct: 582 EAHWTLVRNDDGEPQAIFAINTDITQ--------RKSAENEILHLALYDSLTGLPNRRLL 633 Query: 391 HNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQY 446 + L + + + I +D+ + + D+LG+ D L +V R ++ Sbjct: 634 LDRLGHALAVSARNQRMGALLFIDLDNFKLLNDTLGHDMGDLLLRQVAPRLSSCVRESDT 693 Query: 447 LCRIEGTQFVLVS-------LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY 499 + R+ G +FV++ + ++ I+ I + +R+ +P +D +T SIGI+ Sbjct: 694 VARLGGDEFVVILMGDFGEDHDEALTQISTICERIRSAFIQPFNLDPYIHHITPSIGIAL 753 Query: 500 --DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQL 557 D + + LL A AM + +G N +FF P M + R +L + L ++ N+ Sbjct: 754 FNDQSQTTNELLKRADLAMYQAKASGRNAMRFFDPDMQAAMNARAILESELYKSWERNEF 813 Query: 558 KLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACR 617 L YQ Q+ + + G EAL RW P G +PPS FIP AEE G I +G WV+ AC Sbjct: 814 ILHYQLQVD--SRGIIGAEALVRWQHPRRGLLPPSEFIPQAEETGLILPLGEWVLETACN 871 Query: 618 QLAEWRSQNIHI-PALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEH 676 QLA W Q + LSVN+S+L F QV + G + +L +E+TES+++ Sbjct: 872 QLASWALQPETVQLNLSVNVSSLQFCQPDFVEQVISILDRTGANPQRLKLELTESILVHD 931 Query: 677 DTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILAL 736 + ++ L+ GVG ++DDFG G+S L L LP+ +KID+SFV LT+ + Sbjct: 932 MDDTIAKMMTLKARGVGFALDDFGIGYSSLYYLKRLPLDWVKIDRSFVRDVLTDNNDATI 991 Query: 737 LEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 + I + +S+ L V+AEGVET Q + L C QGY FSRPLP E+ ++ Sbjct: 992 VRTILLLAKSMGLAVIAEGVETGAQKDFLASHGCTAYQGYLFSRPLPLEQFERFVQ 1047 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 78/250 (31%), Gaps = 16/250 (6%) Query: 16 PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGN-NIDMLIPRDLRPAHPEYIR 74 LE ++ + N AE L RE+++G + EY R Sbjct: 381 RILESITDAFYTLDREWRFTYVNKEAENLLQRNREDLLGRVCWEEFKETAGTTFDREYHR 440 Query: 75 HNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKE- 133 E E L W VY+ + E A++E Sbjct: 441 ALMENRTVTFEEFYVPLDE--------WFEVHAYPSEEGLTVYFRDITERKESEQARQEA 492 Query: 134 --QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFP 191 + RQ +D +IV + I N+ ++G+ E G + + L + Sbjct: 493 HVRIRQQASLLDKATDAIIVFGMDNCIEFWNQGAERLYGWTSEEVMGREVEMLYDNVAVF 552 Query: 192 ADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEE 251 + + L + + E R + ++A + V + Q + +DIT+ Sbjct: 553 DEA----NRALLSSGEWRGELAQRRRDQSMLNVEAHWTLVRNDDGEPQAIFAINTDITQR 608 Query: 252 RQIRQLEGNI 261 + ++ Sbjct: 609 KSAENEILHL 618 Score = 74.3 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 79/219 (36%), Gaps = 21/219 (9%) Query: 16 PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRH 75 L++ ++ ++ + F+N AE+L+G+ EEV+G ++ML D E R Sbjct: 501 SLLDKATDAIIVFGMDNCIEFWNQGAERLYGWTSEEVMGREVEMLY--DNVAVFDEANRA 558 Query: 76 NREGGKARVEGMSRELQLEKKDGSKIWTRF--ALSKVSAEGKVYYLALVRDASVEMAQKE 133 G+ EL ++D S + L + A+ D + + + Sbjct: 559 LLSSGE-----WRGELAQRRRDQSMLNVEAHWTLVRNDDGEPQAIFAINTDITQRKSAEN 613 Query: 134 QTRQLIIA--VDHLDRPVIVLDPERHIVQCNRAFTEMFGY---------CISEASGMQP- 181 + L + + L ++LD H + + M +++ G Sbjct: 614 EILHLALYDSLTGLPNRRLLLDRLGHALAVSARNQRMGALLFIDLDNFKLLNDTLGHDMG 673 Query: 182 DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGE 220 D LL + +R + + D+ +L+ GE Sbjct: 674 DLLLRQVAPRLSSCVRESDTVARLGGDEFVVILMGDFGE 712 >UniRef50_B6BGA2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGA2_9PROT Length = 802 Score = 719 bits (1856), Expect = 0.0, Method: Composition-based stats. Identities = 209/812 (25%), Positives = 365/812 (44%), Gaps = 52/812 (6%) Query: 12 GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPE 71 + +LEQN + + N +F N KL G + +IG N P ++ + Sbjct: 8 NLILNSLEQN---IFVKDLNSNYLFVNSTYAKLVGKEATAIIGKNDLDFFPEEIAFKY-- 62 Query: 72 YIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV-YYLALVRDASVEMA 130 N + + + + ++ DG R + G+V L + D + Sbjct: 63 ---QNDDSLVIKNKQIIDTVESILIDGKYKTIRTVKKPLYFNGEVSAVLGIFWDITEFNE 119 Query: 131 QKEQTRQLIIAVDHLDR----PVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL- 185 +KE ++L + L+ + + + +FG E G + L Sbjct: 120 EKEHFKKLEYGLSKAQELANIGHWELNLVTNDLFWSDEVYRIFGLKPQEF-GATYEAFLE 178 Query: 186 --NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVM 243 + + N + + ++ + GE +++ +D ++ + Sbjct: 179 HIHPDDVELVNSSYSDSITNRCGYHVTH-RIVRKNGEVGFVEERCEHEFDNDGNVLRSIG 237 Query: 244 TFSDITEERQIRQLE---GNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGM 300 T DIT+++ + + + M + + I + ES + + L Sbjct: 238 TVHDITKQKIAQNELMLASEVFSKMSDGVVITDANQSIIKINESFTKITGYTNEELIGMT 297 Query: 301 PIHWASSSH--------GAEIQNAQSWSATIRQRDGA------PAGILQIKTSSGAETSA 346 P ++S H +I+ WS I R + I+ + G + Sbjct: 298 PKAFSSGWHDEAFYKKMWDDIKQNGQWSGEIIDRKKSSERYIAEMNIIALHNDDG-ILTN 356 Query: 347 FIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV----DKAV 402 +I DIS+ +++ + I L FD +T LPNR + + Sbjct: 357 YISITNDISK--------KKEQEKLIHNLAYFDSLTDLPNRVLFEERVVSRIPFSKRHDK 408 Query: 403 SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLE 461 + I +D+ ++V D+LG+ D L+EV N + ++ L R+ G +F VL+ Sbjct: 409 KMALLFIDMDNFKNVNDTLGHFMGDMFLIEVSNIIKNSIREQDTLARLGGDEFTVLLEDI 468 Query: 462 NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYI 519 N + +I IA+++ + P++I+ K +S+GIS D GK+ + L A AM + Sbjct: 469 NSIMDIVPIAEKIIAAFNNPVLIESKELYTGISMGISLYPDDGKSYNELFKAADTAMYQV 528 Query: 520 RKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALA 579 + +G N +QFF +MNE + ERL L +L+ AI NN+L LVYQP+I ET +YG+EAL Sbjct: 529 KASGKNNFQFFKQSMNEKITERLFLENSLRNAIGNNELFLVYQPKINLETKRVYGMEALI 588 Query: 580 RWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSAL 639 RW P G + P +FI ++EE G+I NIG WV +A HI +S+N+S+ Sbjct: 589 RWRHPEIGLIRPDKFISISEETGQIYNIGLWVAKQAIIDTKALHEAG-HILTVSINVSSK 647 Query: 640 HFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDF 699 + + + + ++ GID + +EITES +M + + K + L D G LS+DDF Sbjct: 648 QLENEKFIDDICCVVNEIGIDKSYVELEITESHIMSNIDKALKILNELSDKGFKLSIDDF 707 Query: 700 GTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETK 759 GTG+S LS L LP IKID+SFV ++ +++ I ++ ++L V+AEG ET+ Sbjct: 708 GTGYSSLSYLKKLPAQTIKIDRSFVLDIYKDEDDRSIVATIIAMAKALGKDVIAEGSETQ 767 Query: 760 EQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 E + L+ +HC +QGYFFS+P+ +E ++ Sbjct: 768 EHIDTLKYLHCNKVQGYFFSKPIEIDEFKEFV 799 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 719 bits (1856), Expect = 0.0, Method: Composition-based stats. Identities = 165/531 (31%), Positives = 270/531 (50%), Gaps = 24/531 (4%) Query: 272 HEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPA 331 + GE I RN +L+ + + + A+ + Q + +RDG+ Sbjct: 183 YSAGEAIGRN---LLDLVIPEGMRAEEKRRMLRMAETGRADPPSEQC----LLRRDGSRI 235 Query: 332 GILQIK--TSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNN 389 +L E DIS E++ + + +E L D +TGL NR Sbjct: 236 TVLSCHAVVRRPGEAPELYGLDIDIS--------ERKINEEQLEYLATHDELTGLANRAL 287 Query: 390 LHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQ 445 H+ L+ + A V L+ +D + + DSLG+++ D+ L V R ++ Sbjct: 288 FHDRLEQSLHYAKRSGRIVAVLLLDLDRFKIINDSLGHSFGDRLLSAVAQRLDRVVRDTD 347 Query: 446 YLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LG 502 + R+ G +FVL+ E + ++ +A + + ++ P I+ + ++ S+GIS Sbjct: 348 TVARLGGDEFVLLLAEVTEPDDVGLLASRILHELAVPHRIEGREIVMSASLGISLYPKDS 407 Query: 503 KNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQ 562 + L+ A AM ++ GG + F++P MN+ E + + +AL+ A+ + L YQ Sbjct: 408 GDGSTLIRNADIAMYRAKQEGGGVFSFYAPEMNQRAMETMEIESALRLALERGEFTLYYQ 467 Query: 563 PQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEW 622 P++ +G + G EAL RW P G V P+ FIPLAEE G I IG WV+ EACRQ+ W Sbjct: 468 PKVDLASGRISGCEALIRWLHPRRGVVAPADFIPLAEETGLIVPIGTWVLKEACRQVRAW 527 Query: 623 RSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFK 682 +++ + I ++VNLSA FR+ LP V + + G+D H L +E+TESM+M ++ Sbjct: 528 QAEGVPIANVAVNLSARQFRTGDLPGLVREVLGETGLDPHLLELEMTESMVMADHAQVVA 587 Query: 683 RIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITS 742 ++ L +GV LS+DDFGTG+S + L P+ +KID+SF+ + +T+ + +I + Sbjct: 588 VMEELTAIGVRLSLDDFGTGYSSFAHLSHFPINHLKIDRSFIKQIVTDPNSATIATSIIA 647 Query: 743 IGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 + + L +AEGVET+ Q LRK C IQGY SRPLPA E + Sbjct: 648 MAHRMRLKAIAEGVETEAQLAYLRKQGCDEIQGYLLSRPLPASEYAALVRR 698 Score = 61.6 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 54/163 (33%), Gaps = 8/163 (4%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDR-PVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 L + E++ E + + + + + N A +GY EA G Sbjct: 132 LRKHRQAELSLCESESRFRRILQEIPSIAFKGYGVDGTVRYWNLASELFYGYSAGEAIGR 191 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQ-DEFLLLTRTGEKIWIKASISPVYDVLAHL 238 L+ A+ + R+ ++ D E LL R G +I + S V Sbjct: 192 NLLDLVIPEGMRAEEKRRMLRMAETGRADPPSEQCLLRRDGSRITV-LSCHAVVRRPGEA 250 Query: 239 QNLVMTFSDITEERQIRQL-----EGNILAAMCSSPPFHEMGE 276 L DI+E + + + L + + FH+ E Sbjct: 251 PELYGLDIDISERKINEEQLEYLATHDELTGLANRALFHDRLE 293 Score = 61.2 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 49/232 (21%), Positives = 80/232 (34%), Gaps = 40/232 (17%) Query: 9 AADGIFFPALEQNMMGAVLINE-NDEVMFFNPAAEKLWGYKREEVIGNN-IDMLIPRDLR 66 ++ F L++ A + V ++N A+E +GY E IG N +D++IP +R Sbjct: 144 ESESRFRRILQEIPSIAFKGYGVDGTVRYWNLASELFYGYSAGEAIGRNLLDLVIPEGMR 203 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK-VYYLALVRDA 125 + E G+A E L ++DGS+I + V G+ L D Sbjct: 204 AEEKRRMLRMAETGRAD---PPSEQCLLRRDGSRITVLSCHAVVRRPGEAPELYGLDIDI 260 Query: 126 SVEMAQKEQTRQL------------IIAVDHLDRPVIVLDPERHIVQC-----------N 162 S +EQ L + D L++ + IV N Sbjct: 261 SERKINEEQLEYLATHDELTGLANRALFHDRLEQSLHYAKRSGRIVAVLLLDLDRFKIIN 320 Query: 163 RAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLL 214 + FG D LL+ D +R + + D+ LL Sbjct: 321 DSLGHSFG-----------DRLLSAVAQRLDRVVRDTDTVARLGGDEFVLLL 361 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 718 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 174/569 (30%), Positives = 282/569 (49%), Gaps = 18/569 (3%) Query: 236 AHLQNLVMTFSDITEERQIRQLEGNI--LAAMCSSPPFHEMGEIICRNIESVLNESHVSL 293 A ++ +T + I + L GNI L ++ + E + R I +L + + Sbjct: 201 AEQESARVTLNSIADAVISADLSGNITFLNSVAEKLTGWQQNEALGRPIADIL-KVVDEI 259 Query: 294 FALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVAD 353 G + + H + + S + +RDG+ I + + V Sbjct: 260 TREPRGSTVERPNQLHRSTKAPSNS---ILVRRDGSELPIDESRAPILDRQGQIAGTVTV 316 Query: 354 ISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLI 409 + A+E + + L Q D +T LPNR L + L + A V + Sbjct: 317 LHDVSVTRAMELKMA-----HLAQHDFLTDLPNRRVLDDRLRQAISLARRQGKQLAVLFV 371 Query: 410 GVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNIT 468 +D + + DSLG+ D+AL + R ++ + R G +FV++ E + Sbjct: 372 DIDRFKHINDSLGHGMGDKALQSMAERLTTCVRASDTVARQGGDEFVILLAEVTTADDAA 431 Query: 469 QIADELRNVVSKPIMIDDKPFPLTLSIGIS--YDLGKNRDYLLSTAHNAMDYIRKNGGNG 526 +A ++ + V+ P I ++ SIGIS + + + L+ A AM ++ G N Sbjct: 432 IVAKKILSAVALPHRIGRHELQISASIGISTCPNDADDAETLIKHADIAMYQAKEKGRNN 491 Query: 527 WQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLH 586 +QFF MNE V +R L ++L+ A+ + L YQP++ ETG + G+EAL RW P Sbjct: 492 YQFFRADMNERVLQRQSLESSLRLALERQEFLLHYQPKMNLETGHITGMEALIRWRHPEL 551 Query: 587 GHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQL 646 G VPP+ FI +AE+ G ++ IGRWV+ EACRQ+ EW ++ ++VN+SA+ FR Sbjct: 552 GLVPPASFIGVAEDCGLMQPIGRWVLQEACRQVKEWMVAGLNPVPVAVNVSAVEFRRKHF 611 Query: 647 PNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGL 706 + V + +D L +E+TE+++M+ + L+ GV L++DDFGTG+S L Sbjct: 612 FDGVISTLRETDLDPRYLELELTETVLMKEAEPTIAVLHALKSAGVKLAIDDFGTGYSSL 671 Query: 707 SRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLR 766 S L LPV +KID+SFV T A++ AI +G+SLNL V+AEGVET+EQ +LR Sbjct: 672 SYLTRLPVDTLKIDRSFVTDVTTRTDNAAIVSAIIGMGKSLNLNVIAEGVETQEQLALLR 731 Query: 767 KIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 C QGY+FSRP+ + +++ L Sbjct: 732 SHCCAEGQGYYFSRPVSVPAVAELLNTEL 760 Score = 66.2 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 61/162 (37%), Gaps = 5/162 (3%) Query: 108 SKVSAEGKVYYLALVRD-ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFT 166 +++A G L D ++E + + ++ + VI D +I N Sbjct: 175 GEINARGLRRALRYAIDRKAIEEKLFAEQESARVTLNSIADAVISADLSGNITFLNSVAE 234 Query: 167 EMFGYCISEASGMQPDTLL----NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKI 222 ++ G+ +EA G +L I P + + L ++ + +L+ R G ++ Sbjct: 235 KLTGWQQNEALGRPIADILKVVDEITREPRGSTVERPNQLHRSTKAPSNSILVRRDGSEL 294 Query: 223 WIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAA 264 I S +P+ D + V D++ R + ++ Sbjct: 295 PIDESRAPILDRQGQIAGTVTVLHDVSVTRAMELKMAHLAQH 336 Score = 55.4 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 51/129 (39%), Gaps = 3/129 (2%) Query: 15 FPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNI-DMLIPRDLRPAHPEYI 73 L + + + + F N AEKL G+++ E +G I D+L D P Sbjct: 207 RVTLNSIADAVISADLSGNITFLNSVAEKLTGWQQNEALGRPIADILKVVDEITREPRGS 266 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKV-YYLALVRDASVEMAQ 131 R R L ++DGS++ + + + +G++ + ++ D SV A Sbjct: 267 TVERPNQLHRSTKAPSNSILVRRDGSELPIDESRAPILDRQGQIAGTVTVLHDVSVTRAM 326 Query: 132 KEQTRQLII 140 + + L Sbjct: 327 ELKMAHLAQ 335 >UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FU0_DECAR Length = 1006 Score = 718 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 188/704 (26%), Positives = 316/704 (44%), Gaps = 38/704 (5%) Query: 117 YYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 Y + R+ V + +L A + V C+ +F + E Sbjct: 311 LYRSQRREQLVSQQLLLKEERLTAAQRIAQLGSWEIHLPSMHVTCSDELYRIFEFTKRE- 369 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTR----TGEKIWIKASISPVY 232 +G Q L + ++R + + L ++ + L R G ++ S Y Sbjct: 370 TGYQYQDFL--AKIHPEDRSVVDKTLHESIASRQPASLKHRLLMPDGRVKYVLESCETEY 427 Query: 233 DVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVL 286 ++ T ++T ++++ + +A+ S + ++ + + Sbjct: 428 GRDGTPLRVIGTSQEVTAQQEMLAQMQLLASAVQYSGEAILITDVKNKILTVNPAFTRLT 487 Query: 287 NESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG---ILQI 336 + L G + I W I R++DG + + Sbjct: 488 GYTSEEAVGRDPSFLSAGRTMPEEYERMWNGIAERGFWQGEIWDRRKDGGIYPKWMSISV 547 Query: 337 KTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDD 396 + D+S A + + + + D +TGL NR +L LD Sbjct: 548 IRGEDGMIRYHVAHFTDVSSERA--------AEERLHHMAHHDVLTGLLNRLSLKGRLDQ 599 Query: 397 LVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEG 452 + A V + +D + + D+LG+ D+ L+EV NR R+ ++ + R+ G Sbjct: 600 ALAAARRDGSRVAVLFVDLDRFKVINDTLGHHVGDELLIEVANRLRDGVRDSDVVARVGG 659 Query: 453 TQFVL-VSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLL 509 +FV+ +S S + +A++L V + I T SIGI+ G++ D L+ Sbjct: 660 DEFVIMLSGVEHTSAVAMVAEKLVFSVGQSYQIGGYDLYSTPSIGIAIYPTDGEDGDILM 719 Query: 510 STAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAET 569 A AM + + G N +QFF MNE ERL AL+ A++N + L YQP I + Sbjct: 720 KNADAAMYHAKMAGRNNFQFFDAKMNEAALERLNTEHALRRALANQEFCLYYQPVIDLAS 779 Query: 570 GELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHI 629 + +EAL RW+ P G + P +FI +AEE G I+ +G WV+ ACRQLA++ + I Sbjct: 780 NRVASLEALIRWNHPEKGLLLPGKFIGIAEETGLIQPLGEWVLWAACRQLADFAAAGISG 839 Query: 630 PALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRD 689 + VN+SA+ R+ LP + A+ ID L EITES+ ME TE + + +L Sbjct: 840 IKMGVNISAIQMRNGNLPLLARGVIEAYDIDPRNLIFEITESVAMEQPTETVRILDLLNA 899 Query: 690 MGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNL 749 MGV +++DDFGTG+S LS L P+ +K+D+SFV++ E + +A + SL L Sbjct: 900 MGVSVAIDDFGTGYSSLSYLRMFPINHLKLDRSFVEQIGEEIDGCVICDATIGLAHSLEL 959 Query: 750 TVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 VVAEGVET+ Q + LR C ++QG+ FSRP+PA+E+ ++ Sbjct: 960 KVVAEGVETQAQLDYLRSRGCDMVQGFLFSRPVPADEVLAFIRQ 1003 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 79/222 (35%), Gaps = 12/222 (5%) Query: 45 WGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWT- 103 GY+ ++ + I + R + + + + +L DG + Sbjct: 370 TGYQYQDFLAK-----IHPEDRSVVDKTLHESIASRQPASLKH----RLLMPDGRVKYVL 420 Query: 104 RFALSKVSAEGKVY-YLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCN 162 ++ +G + ++ + + Q + L AV + +++ D + I+ N Sbjct: 421 ESCETEYGRDGTPLRVIGTSQEVTAQQEMLAQMQLLASAVQYSGEAILITDVKNKILTVN 480 Query: 163 RAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKI 222 AFT + GY EA G P L+ + R+ + + Q E + G Sbjct: 481 PAFTRLTGYTSEEAVGRDPS-FLSAGRTMPEEYERMWNGIAERGFWQGEIWDRRKDGGIY 539 Query: 223 WIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAA 264 SIS + ++ V F+D++ ER + ++ Sbjct: 540 PKWMSISVIRGEDGMIRYHVAHFTDVSSERAAEERLHHMAHH 581 Score = 75.5 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 6/133 (4%) Query: 9 AADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPA 68 A + A++ + ++ + ++++ NPA +L GY EE +G + L P Sbjct: 451 AQMQLLASAVQYSGEAILITDVKNKILTVNPAFTRLTGYTSEEAVGRDPSFLSAGRTMPE 510 Query: 69 HPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLALVRDAS 126 E + G A E+ +KDG ++S + E + Y++A D S Sbjct: 511 EYERM----WNGIAERGFWQGEIWDRRKDGGIYPKWMSISVIRGEDGMIRYHVAHFTDVS 566 Query: 127 VEMAQKEQTRQLI 139 E A +E+ + Sbjct: 567 SERAAEERLHHMA 579 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 718 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 191/684 (27%), Positives = 326/684 (47%), Gaps = 46/684 (6%) Query: 134 QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP-EFPA 192 + + +L +I L E ++ + + + E D ++P + A Sbjct: 116 SESKTRALLSNLPDIIIRLHREGAVLDMQVG---SYVFDMGEWLHSAEDGSYHLPSDIAA 172 Query: 193 DNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER 252 R+ L EF +A I P Q +++ +IT+ R Sbjct: 173 LIGTRIDAALRGKGMQMLEFQWSRDPMCVRHWEARIVPR-----DRQEVLLVVREITQRR 227 Query: 253 QIRQL--------EGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALR-----NG 299 Q E + A + + F + + R E+++ + + Sbjct: 228 QQENQLRLWAKVFEASNEAILITDANFRIIS--VNRAYETIMGYREQDVLGVDTLEVGAK 285 Query: 300 MPIHWASSSHGAEIQNAQSWSATI--RQRDG----APAGILQIKTSSGAETSAFIERVAD 353 + + + + ++ W + +++ G + + Q+ S G E +I D Sbjct: 286 LQTYSFYRNLVSLLKERGHWQGELINQRKSGEEFPSWFSVTQVTNSRG-EPEHYIAIFND 344 Query: 354 ISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV----DKAVSPVVYLI 409 I+ E + SR IE L D +TGLPNR L++ L+ + + + I Sbjct: 345 IT--------EHKNSRAQIEFLAHHDALTGLPNRILLNDRLEMAITQVRRQGEKLGILFI 396 Query: 410 GVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVS-NIT 468 +D ++V DSLG+ DQ L E R ++ + R+ G +FV++ N+ Sbjct: 397 DLDRFKNVNDSLGHGVGDQILQEAAKRLTANVRTGDTVSRLGGDEFVVLFPRVRTEGNLA 456 Query: 469 QIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNG 526 + +LR + P +D +T SIGI+ D G++ + L+ A AM ++ G N Sbjct: 457 DLTIKLREQLQLPYTVDGISLHITPSIGIAVYPDDGEDPNTLIKNADAAMYLAKEKGRNN 516 Query: 527 WQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLH 586 +QF++P +N +RL L + L+ AI +L YQPQI +G+L+G+EAL RW Sbjct: 517 YQFYTPTLNAKTLDRLKLESDLRSAIDAGDFELHYQPQIIGSSGQLWGLEALIRWRHRER 576 Query: 587 GHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQL 646 G + P+ FIPLAEE G I +G WV+ +A +QLAEWR Q + +SVN+SAL FR Sbjct: 577 GLISPAEFIPLAEETGLIVGLGDWVLVQAVKQLAEWRRQGHNHLVVSVNISALQFRQGDF 636 Query: 647 PNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGL 706 ++V + + + +E+TE+M+M+ + ++ LR++G +++DDFGTGFS L Sbjct: 637 LDRVKHILQEAQLVPDAIELELTETMLMQDVQSAIQTLKGLRELGFRIAIDDFGTGFSSL 696 Query: 707 SRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLR 766 + L LP+ +KID+SFV L E LA++E+I ++ Q+L +AEGVET+ +F++L+ Sbjct: 697 NYLRHLPINVLKIDQSFVREMLQEPESLAIVESIIALAQALGKETIAEGVETRAEFDVLQ 756 Query: 767 KIHCRVIQGYFFSRPLPAEEIPGW 790 CR++QGYFF+RP+P W Sbjct: 757 ARGCRLMQGYFFARPMPPVIFDQW 780 Score = 65.8 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 69/162 (42%), Gaps = 11/162 (6%) Query: 13 IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIG-NNIDMLIPRDLRPAHPE 71 ++ E + ++ + N ++ N A E + GY+ ++V+G + +++ + Sbjct: 235 LWAKVFEASNEAILITDANFRIISVNRAYETIMGYREQDVLGVDTLEVGAKLQTYSFYRN 294 Query: 72 YIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS--AEGKVYYLALVRDASVEM 129 + +E G EL ++K G + + F++++V+ +Y+A+ D + Sbjct: 295 LVSLLKERGH-----WQGELINQRKSGEEFPSWFSVTQVTNSRGEPEHYIAIFNDITEHK 349 Query: 130 AQKEQTRQLII--AVDHLDRPVIVLDP-ERHIVQCNRAFTEM 168 + Q L A+ L +++ D E I Q R ++ Sbjct: 350 NSRAQIEFLAHHDALTGLPNRILLNDRLEMAITQVRRQGEKL 391 >UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Pseudomonas RepID=A4Y0Z3_PSEMY Length = 960 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 193/764 (25%), Positives = 341/764 (44%), Gaps = 42/764 (5%) Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRD 124 L+ H + + N E K R EG++ EL E + + + E +V L D Sbjct: 209 LQRFHNQALIANLEHAKQRAEGLNEELAREVEQRRRAERELRGAHGELEMRVAERTLELD 268 Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 + A + +L +A++ + + D E V + E+FG + M D Sbjct: 269 EAT-HALGKSQARLALALEASELGLWDWDLESDQVHHSH-LRELFGLEPEQVQVMLRDLT 326 Query: 185 --LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV-YDVLAHLQNL 241 L+ + P R ++ + ++ Q E+ + G +W++ V D ++ + Sbjct: 327 PRLHPDDLPRLRRALVEHMKGRSEDYQIEYRVRHVDGHWVWVEDRGRAVERDAAGRVRRM 386 Query: 242 VMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE--------------IICRNIESVLN 287 + T D++ RQ Q + ++ + + + + E V+ Sbjct: 387 LGTRRDVSARRQQEQEQRLAATVFEAASEGIFILDPDYRVLAVNRAFSAVTGYSREEVVG 446 Query: 288 ESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIR--QRDGAPAGI---LQIKTSSGA 342 + SL R + E+ + SW + ++ G L + + Sbjct: 447 RTVTSLIGSREMRRQYQMIRQ---ELDGSGSWQGELIETRKSGELYPQWLQLNLVRDASG 503 Query: 343 ETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV 402 S + AD++ + ++ + + L +D +TGL NR+ L + +A Sbjct: 504 RPSHIVGFFADLTA--------RREAEERLRYLSHYDELTGLANRSLFKERLHEASQRAR 555 Query: 403 SP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV 458 + I +D + + DSLG+ ADQ L ++ R + + + R+ G +F ++ Sbjct: 556 QSGRSIALVHIDLDRFKLLNDSLGHEVADQLLRQMSRRLTQAVPEADCIARLSGDEFAIL 615 Query: 459 SLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNA 515 +S++ ++A L + P+ + ++ S+GIS D + L+S A+ A Sbjct: 616 LDAYGSLSSLARVASRLLAKLRLPMDVGGHELVVSASLGISLLPDYAREIGALISQANMA 675 Query: 516 MDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGI 575 + + + GGN +QFF+ + ERL L L++AI QL++ YQP++ +L Sbjct: 676 VQHAKHLGGNTFQFFTDNLQACTLERLQLENQLRKAIEEGQLEVFYQPKLNLADDQLNAA 735 Query: 576 EALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVN 635 EAL RW P G V P FI LAEE G I IG +V+ +ACRQ +W+ Q + +SVN Sbjct: 736 EALVRWRHPQQGLVAPGEFIGLAEETGLIAPIGEFVLRQACRQARQWQQQGLAEIRVSVN 795 Query: 636 LSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLS 695 +S R L + V + G+ L +E+TES ++++ + + LR++GV L+ Sbjct: 796 ISVYQLRQGNLTSLVRQVLEETGLAPQYLELELTESQLLDNVDSVVVTFRQLRELGVKLA 855 Query: 696 VDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEG 755 +DDFGTG+S LS L PV +KID++F+ A+ AI ++ SL L VVAEG Sbjct: 856 IDDFGTGYSSLSYLKRFPVHYVKIDQTFIRDLSPGGEDAAITRAIIAMAHSLELKVVAEG 915 Query: 756 VETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI 799 VET+ Q + L+ +C IQGY SRP+ A + + + Sbjct: 916 VETQAQMDFLKSQNCDEIQGYLISRPVEAAAFAELLRAQRDDPL 959 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 100/261 (38%), Gaps = 6/261 (2%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 T A + ALE + +G + + + + +L+G + E+V + L PR Sbjct: 271 THALGKSQARLALALEASELGLWDWDLESDQVHHSH-LRELFGLEPEQVQVM-LRDLTPR 328 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK---VYYLA 120 P R E K R E E ++ DG +W V + L Sbjct: 329 LHPDDLPRLRRALVEHMKGRSEDYQIEYRVRHVDGHWVWVEDRGRAVERDAAGRVRRMLG 388 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 RD S Q+++ R + + +LDP+ ++ NRAF+ + GY E G Sbjct: 389 TRRDVSARRQQEQEQRLAATVFEAASEGIFILDPDYRVLAVNRAFSAVTGYSREEVVGRT 448 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 +L+ E ++Q L + Q E + ++GE ++ V D + Sbjct: 449 VTSLIGSREMRRQY-QMIRQELDGSGSWQGELIETRKSGELYPQWLQLNLVRDASGRPSH 507 Query: 241 LVMTFSDITEERQIRQLEGNI 261 +V F+D+T R+ + + Sbjct: 508 IVGFFADLTARREAEERLRYL 528 Score = 70.8 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 6/128 (4%) Query: 18 LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNR 77 E G +++ + V+ N A + GY REEV+G + LI + IR Sbjct: 410 FEAASEGIFILDPDYRVLAVNRAFSAVTGYSREEVVGRTVTSLIGSREMRRQYQMIRQEL 469 Query: 78 EGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYLALVRDASVEMAQKEQT 135 +G + EL +K G W + L + ++ + + D + +E+ Sbjct: 470 DGSGS----WQGELIETRKSGELYPQWLQLNLVRDASGRPSHIVGFFADLTARREAEERL 525 Query: 136 RQLIIAVD 143 R L + Sbjct: 526 RYLSHYDE 533 >UniRef50_A1SZV0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZV0_PSYIN Length = 711 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 200/669 (29%), Positives = 313/669 (46%), Gaps = 64/669 (9%) Query: 180 QPDTLLNIPEFPADNRIRLQQLLWK----------TARDQDEFLLLTRTGEKIWIKASIS 229 QPD +L E P N + + L + A QD+ + + E Sbjct: 45 QPDIVLLDVEMPGMNGFEVCRQLRRFPCGKLVPILMATGQDDLDSVRQAYEAGATDFVTK 104 Query: 230 PVY-DVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNE 288 P +LAH ++ SDITE+ + + E ++ E +E Sbjct: 105 PFNWKILAHRLRYMVRASDITEQLE-ELQKSESRLGNAQRIARLGNWEWDLKSNEIYWSE 163 Query: 289 SHVSLFALRNGMP-------------------IHWASS-SHGAEIQNAQSWSATIRQRDG 328 + LR G+ + W HGA+ + W+ ++ Q DG Sbjct: 164 QLYHMLWLRRGVAKPSFRGFISRLPHGERKDFMGWIQGLRHGAKEEQRGGWNHSLNQADG 223 Query: 329 APAGI---LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLP 385 + + ++ V D++ E +++ I QL FD +TGL Sbjct: 224 SRLNVQHQAEVFYDENGAAKVVSGTVVDVT--------ELTQAQDQILQLAHFDSLTGLA 275 Query: 386 NRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKL 441 NRN ++ +++A V + +D+ + + D+LG++ DQ L EV R + + Sbjct: 276 NRNAFRKRVELAMERAKQYGHLGAVLFLDLDNFKRINDTLGHSIGDQLLQEVARRLTDIV 335 Query: 442 KPDQYLC--------------RIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDD 486 + +C R+ G +F ++ E + + A + N + I + Sbjct: 336 RGSDSICGTNFNHAIDDNLISRLGGDEFTVLLPEIGKIKDAEHAARRVLNSIGDIINLSG 395 Query: 487 KPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVL 544 +T SIGI+ G+N D LL A AM Y+++ G N ++ F +MN + K RL L Sbjct: 396 HDIVVTPSIGIAIFPHHGENVDSLLKNADAAMYYVKRAGKNDYELFVNSMNVVAKRRLEL 455 Query: 545 GAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEI 604 + L+ AI N +L + YQPQI TG + G EAL RW+ G V P FIP+AEE G I Sbjct: 456 ESFLRHAIDNKELSVNYQPQIDIPTGRIIGAEALLRWNSAELGMVSPVEFIPIAEETGLI 515 Query: 605 ENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQL 664 IG WV+ EACRQ+ EWR + ++VN+S F L VS + G+ H L Sbjct: 516 SPIGEWVLREACRQVKEWRDDGLPEIQIAVNISVQQFAKQSLDKLVSKVLLETGLPVHCL 575 Query: 665 TVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFV 724 +EITE+M+M+ + + L+D+G+ L++DDFGTG+S LS L P+ ++KID+SF+ Sbjct: 576 ELEITENMLMDDVEGAVETLHKLKDLGINLAIDDFGTGYSSLSYLKRFPIDKLKIDRSFI 635 Query: 725 DRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPA 784 TE A+ +AI S+ +L LTV+AEGVE Q E LR+ HC +QGY+FSRPL A Sbjct: 636 TYVTTEPSDAAVTQAIISMAHNLGLTVIAEGVEEASQLEFLRQHHCEEMQGYYFSRPLIA 695 Query: 785 EEIPGWMSS 793 ++ + S Sbjct: 696 SDMEALLRS 704 >UniRef50_A1S8A3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S8A3_SHEAM Length = 751 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 187/680 (27%), Positives = 305/680 (44%), Gaps = 34/680 (5%) Query: 137 QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRI 196 L +D D + + D E N++ + ++ + + Sbjct: 80 LLQSFMDAFDEHIWIKDAEGRYRFINQSTLVSWDLSPAQILSRKDAEVFP-DRVSEYTDT 138 Query: 197 RLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQ 256 L+ + E + + IW++ +P+YD+ L ++ T DI + + Sbjct: 139 DLKAVKEGHPIVVAECIDRSLDKGNIWLETIKAPMYDMDGRLLGVIGTTRDIARYKAAEE 198 Query: 257 L---EGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSH---- 309 + + II + + S + P S H Sbjct: 199 QLFLTSKVFENAIEGVMITDSNGIITEINGAFETITGYSRDEVIGKTPKLLNSGRHERDF 258 Query: 310 ----GAEIQNAQSWSATI--RQRDG----APAGILQIKTSSGAETSAFIERVADISQHMA 359 ++ W I R+++G I + G + F+ +DIS Sbjct: 259 FENLWRALKTQGHWHGEIWNRRKNGTLFAEQTSISAVYGEDG-QVRCFVAVFSDISL--- 314 Query: 360 ALALEQEKSRQHIEQLIQFDPMTGLPNRNNL----HNYLDDLVDKAVSPVVYLIGVDHIQ 415 +++ + QL DP+T LPNR+ L + ++ + LI VD + Sbjct: 315 -----LKQTEAEVAQLAWHDPLTRLPNRSKLTTISQQQIKLAANRKTRLALLLIDVDLFK 369 Query: 416 DVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELR 475 + DS G+ D+ LL + R L + L RI G +FVL++ +I I ++ Sbjct: 370 HINDSFGHLAGDKVLLSLSERLAALLGAEDTLARIGGDEFVLLTQVRRRDDIPVILSAIQ 429 Query: 476 NVVSKPIMI-DDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSP 532 + + L+ SIGI+ D G N D LL A AM ++ G N F++ Sbjct: 430 RAFDTSFDTSEGESVRLSASIGIAVYPDDGDNPDTLLKNADAAMYRAKQQGRNRHAFYTE 489 Query: 533 AMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPS 592 M + ++L L AL+ A+ N+ L LVYQP+I T +L G+EAL RW D G V P+ Sbjct: 490 QMTQSSMQQLRLQTALRGAVKNSALSLVYQPKINLRTRKLIGVEALCRWTDHELGVVSPA 549 Query: 593 RFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSD 652 FIP+AE IG + IG WV+ EACRQ WR Q ++ ++VN+S + + V+ Sbjct: 550 EFIPVAESIGLMPEIGLWVLKEACRQARIWRDQGLNPGRMAVNVSGSQLTGDNFADSVAR 609 Query: 653 AMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSL 712 + G+ L +EITES+++++ + LR MGV L++DDFGTG+S LS L L Sbjct: 610 VLTQTGLSPDALELEITESVVLDNPASAIDTMDKLRGMGVSLALDDFGTGYSSLSYLRKL 669 Query: 713 PVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRV 772 P+ ++KID+SFV T++ A+ AI ++G++L L V+AEGVE + Q E L ++ C Sbjct: 670 PLNKLKIDQSFVRELPTDQDSGAIAMAIIAMGEALKLGVIAEGVENETQAEFLLRLGCTE 729 Query: 773 IQGYFFSRPLPAEEIPGWMS 792 QGY F+RPL A E+ + Sbjct: 730 AQGYLFARPLLASELKQLLQ 749 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 82/252 (32%), Gaps = 7/252 (2%) Query: 12 GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPE 71 G+ ++ + + F N + W +++ + P + Sbjct: 79 GLLQSFMDAFDEHIWIKDAEGRYRFINQSTLVSWDLSPAQILSRKDAEVFPDRVSEYTDT 138 Query: 72 YIRHNREGGKARVEGMSRELQLEKKDGSKIWTR-FALSKVSAEGKV-YYLALVRDASVEM 129 ++ +EG V E D IW +G++ + RD + Sbjct: 139 DLKAVKEGHPIVVA----ECIDRSLDKGNIWLETIKAPMYDMDGRLLGVIGTTRDIARYK 194 Query: 130 AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE 189 A +EQ ++ V++ D I + N AF + GY E G P LLN Sbjct: 195 AAEEQLFLTSKVFENAIEGVMITDSNGIITEINGAFETITGYSRDEVIGKTPK-LLNSGR 253 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 D L + L E + G + SIS VY ++ V FSDI+ Sbjct: 254 HERDFFENLWRALKTQGHWHGEIWNRRKNGTLFAEQTSISAVYGEDGQVRCFVAVFSDIS 313 Query: 250 EERQIRQLEGNI 261 +Q + Sbjct: 314 LLKQTEAEVAQL 325 >UniRef50_C0N514 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N514_9GAMM Length = 1084 Score = 717 bits (1853), Expect = 0.0, Method: Composition-based stats. Identities = 174/697 (24%), Positives = 316/697 (45%), Gaps = 41/697 (5%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 + A + + + + + ++ ++ + ++ LD I Q N A +F + G Sbjct: 397 ITELAQAKESLENREQHILAILNGVPEAILTLDVNGKIEQTNPAAERIFHATENALVGEN 456 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 E ++Q EF G + + S+S + + Sbjct: 457 ISRFFAHSETVTSFNDIIEQAAEGK-----EFDGQRYDGSDVSMVLSLSQIRAAKGEV-- 509 Query: 241 LVMTFSDITEER----QIRQLEGNILAAMCSSPPF-------------HEMGEIICRNIE 283 V +DI+ + Q++Q + A + ++ + E+ + Sbjct: 510 WVCVITDISTRKRTELQLQQTTTELNAILDNAMVGIAFLRDRQFVRVNEKFEELFGYTRD 569 Query: 284 SVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGA--PAGILQIKTSSG 341 + +S L+ + + H + + ++DG GI +G Sbjct: 570 DIEGQSVQCLYLNEDAYLQFGEEAYHQLTSGDNYEAQLEMVRKDGQVFWCGISGKAIDAG 629 Query: 342 AETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA 401 + + I DI+ Q ++ +H+ +L D +TGLPNR + ++ + K+ Sbjct: 630 SPKAGTIWLFEDITI--------QRQNEEHLTRLASIDGLTGLPNRAVFTDRVEHAIHKS 681 Query: 402 VS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVL 457 + V+ + +DH + + DSLG+ D L EV R + ++ + R+ G +F L Sbjct: 682 MRNSGRLAVFFLDLDHFKHINDSLGHKAGDILLTEVAGRIKACVREGDTVARLGGDEFTL 741 Query: 458 VSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHN 514 + + + ++A+++ +++P I++ ++ SIGIS G++ D L+ A Sbjct: 742 LLEDVRSAEYVGKVAEKVIKSMTQPYQIENTEVNISPSIGISLYPADGRDVDMLVRNADA 801 Query: 515 AMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYG 574 AM + +K G N +QF+S MN +RL + AL+ + L L YQPQ+ +TG+L G Sbjct: 802 AMYHAKKVGRNNFQFYSAEMNAEAAKRLAMETALRRVVEQQDLHLHYQPQVNLQTGKLVG 861 Query: 575 IEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSV 634 E L RW G+V P+ F+P+ E+ G I +G W++ +AC EW + ++V Sbjct: 862 AEVLLRWQSEQWGNVSPAEFVPMLEDTGMITQVGEWILRQACATYLEWSERLPDNFMMAV 921 Query: 635 NLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGL 694 NLS F+ L + + G+ L +EITESM+M+ + L M + L Sbjct: 922 NLSGRQFKGGSLAAFIRRLLDETGMPAAHLELEITESMLMDDTELATITLAELSAMNISL 981 Query: 695 SVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAE 754 ++DDFGTG+S LS L P+ +KID SFV ++K A+++AI ++ SL L VVAE Sbjct: 982 AIDDFGTGYSSLSYLKQFPLNVLKIDSSFVRDVTSDKDDAAIVDAIMAMSNSLGLKVVAE 1041 Query: 755 GVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 GVET EQ + L + CR+ QG+ FS+ + ++ + Sbjct: 1042 GVETAEQRQYLLRHDCRLAQGFLFSKAVDKDKFSTLI 1078 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 99/264 (37%), Gaps = 14/264 (5%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 ++ + L + ++ N ++ NPAAE+++ ++G NI Sbjct: 405 ESLENREQHILAILNGVPEAILTLDVNGKIEQTNPAAERIFHATENALVGENISRFF--- 461 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRD 124 AH E + + + EG E ++ DGS + +LS++ A ++ ++ D Sbjct: 462 ---AHSETVTSFNDIIEQAAEGK--EFDGQRYDGSDVSMVLSLSQIRAAKGEVWVCVITD 516 Query: 125 ASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 S + Q +Q L +D+ + L +R V+ N F E+FGY + G Sbjct: 517 ISTRKRTELQLQQTTTELNAILDNAMVGIAFL-RDRQFVRVNEKFEELFGYTRDDIEGQS 575 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 L + L + + ++ + G+ W S + D + Sbjct: 576 VQCLYLNEDAYLQFGEEAYHQLTSGDNYEAQLEMVRKDGQVFWCGISGKAI-DAGSPKAG 634 Query: 241 LVMTFSDITEERQIRQLEGNILAA 264 + F DIT +RQ + + + Sbjct: 635 TIWLFEDITIQRQNEEHLTRLASI 658 >UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA and GAF sensor n=2 Tax=Cyanothece sp. PCC 7425 RepID=B8HWB1_CYAP4 Length = 884 Score = 717 bits (1853), Expect = 0.0, Method: Composition-based stats. Identities = 174/777 (22%), Positives = 322/777 (41%), Gaps = 91/777 (11%) Query: 25 AVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARV 84 + ++ + + NPAA + + + HP I + + Sbjct: 177 ILEVDRFGNITYLNPAAVETF--------------PNLQSKGQEHPLLIGLLQVIQEHPH 222 Query: 85 EGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDH 144 +R++Q+ G+ + ++ + A + A+ D + + + + + Sbjct: 223 SFCTRQVQV----GNTFF-EQSIHYLPASNLIRCFAI--DITQRLQAERELYLRDRLLQA 275 Query: 145 LDRPV--IVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLL 202 + ++ + + A + E + + I PA + Q Sbjct: 276 VTTATHHLLTNSDFE-TAVPHALATLGAAAEVERVYIYDNRYCLINREPAMQLRFVWQAD 334 Query: 203 WKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNIL 262 T + + + S+S YD LA + + + + + Q I Sbjct: 335 SFTVHEDNH------RQSPAFSSFSLSHWYDHLAEGKTISGLTNSFSPQEQDILNRAGIK 388 Query: 263 AAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSAT 322 + + + ++++ Q+++ WS Sbjct: 389 SLLI---------------VPILVDDQLWGCIGFD--------------ACQSSRCWS-- 417 Query: 323 IRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMT 382 + + A ++ + S A++++ Q I D +T Sbjct: 418 --KNEEAVLAMMAVSISG---------------------AIQRQHKEQVIRYQAFHDLLT 454 Query: 383 GLPNRNNLHNYLDDLVDKAVSPV----VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFR 438 LPNR + L+ + A V + +D + + D+LG++ DQ L V +R Sbjct: 455 DLPNRALFIDRLNLALSNAHRSGEKLSVLFLDLDRFKTINDTLGHSVGDQLLKAVAHRLT 514 Query: 439 EKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGI 497 L+ + R G +F ++ + + V+++ + A + + + +P +++ +T SIGI Sbjct: 515 HCLREGDTIARWGGDEFTILLPQIHQVNDVAKTAQRMLSALEQPFHLENHELYITPSIGI 574 Query: 498 SYDL--GKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNN 555 + G + + L+ A A+ ++ G N +QFF ++ ERL L +L+ A+ Sbjct: 575 AIYDLDGHDGETLIKHADMALYQAKQLGRNTYQFFCSGLSNGAPERLNLEKSLRHALERQ 634 Query: 556 QLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEA 615 + L YQPQ+ +TG++ G+EAL RW P G V P F+ +AEE G I IG WV+ A Sbjct: 635 EFLLYYQPQVNIKTGKITGMEALLRWKHPEMGLVIPQLFMSVAEESGLIVAIGEWVLRTA 694 Query: 616 CRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMME 675 C Q W+ Q + ++VNLSA FR L ++ + G+ L +EITE+ ++ Sbjct: 695 CAQNKTWQDQGLPPICIAVNLSARQFRQPDLTGMIARILDETGLPPQYLDLEITETTAIQ 754 Query: 676 HDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILA 735 + +Q L+DMG+ +S+DDFGTG+S L+ L P+ +KID+SFV R Sbjct: 755 DIEFTKRVLQELQDMGIQISMDDFGTGYSSLAHLQQFPLNTLKIDRSFVRDVAANSRDAQ 814 Query: 736 LLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 ++ A+ + + LNL VVAEGVE EQ L +HC QGY F+RPL A+ + Sbjct: 815 IVTAVIGLARGLNLNVVAEGVENDEQLNCLESLHCEEAQGYIFNRPLEADAATEILQ 871 >UniRef50_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PLR8_VIBFU Length = 1097 Score = 717 bits (1853), Expect = 0.0, Method: Composition-based stats. Identities = 200/813 (24%), Positives = 350/813 (43%), Gaps = 57/813 (7%) Query: 20 QNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREG 79 Q G V+ + V++ N A L GY EE+ G L+ + I + Sbjct: 295 QTTNGVVITDVKGRVIWINEAFSFLTGYSIEEMQGKKPGELLQGEDTDPATVAIMRDALA 354 Query: 80 GKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLALVRDASVEMAQKEQTR- 136 + G + ++ K + W R A + + +E Y+A+ D + E +E R Sbjct: 355 QQN---GFNVDVVNYSKAQNSYWVRIACNPLFSESGSLSGYIAIETDITKEKQDEELIRN 411 Query: 137 ---QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ---PDTLLNIPEF 190 L +D + + + + N + + GY +SE + L + + Sbjct: 412 SQNLLKAVIDANNIGTWHFNIQTGELIINDKWAALLGYTLSELLPANRYTWERLTHPDDL 471 Query: 191 PADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASIS-PVYDVLAHLQNLVMTFSDIT 249 I + + + + + GE IWI L+ T DI Sbjct: 472 AYCTTILEKHVSGLIPIYEANLRMKHKNGEWIWINTRGRISSRTYDGKALWLLGTHFDIN 531 Query: 250 EER--------QIRQLEGNILAAMCSSPPFHEMGEIICRN--IESVLNESHVSLFALRNG 299 ++ + RQ+E + + G+I+ N + + + Sbjct: 532 DQIIAEKALSDKSRQMEAVVEGLLDGIITIDGRGKILTFNQAAQEIFGYTEDETLGKNIS 591 Query: 300 MPIHWASSSH-----------GAEIQNAQSWSATIRQRDGAPAGI-LQIKTSSGAETSAF 347 M + H G + ++DG+ I L I A F Sbjct: 592 MLMGSPHREHHDSYLSNYIERGVSEITGRIRELEALRKDGSMFPIELGIVEVQMAGEVNF 651 Query: 348 IERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS---- 403 I V DI+ E+++ I QL +DP+T LPNR L + L + ++ +V Sbjct: 652 IGVVRDIT--------ERKQRENEIHQLAFYDPLTLLPNRRLLLDRLTEAINHSVRTRNF 703 Query: 404 PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEND 463 ++ + +D+ +++ DS G+ D L +V R ++ + R+ G +FV+++ + Sbjct: 704 SALFFLDLDNFKNLNDSAGHNKGDLLLGQVAERLVNSVRQGDTVARLGGDEFVIIASDLS 763 Query: 464 ------VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGKNR--DYLLSTAHNA 515 + ++A ++ + +++ +D + + SIG++ +N + LL A A Sbjct: 764 HEPTLAANQAERLAQKIVSNLTREYNLDGLTYNSSASIGVTLFNSENLPKEDLLKQADMA 823 Query: 516 MDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGI 575 M + G NG QFF P M V R + + L AI + Q L YQ Q+ + G+ Sbjct: 824 MYKAKYAGRNGVQFFDPQMQVSVSSRASIVSDLYSAIQSQQFVLFYQKQVN-HLKQCIGV 882 Query: 576 EALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEW-RSQNIHIPALSV 634 E L RW P G V P +FIPLAEE G I IG WV+ EAC LA+W +++V Sbjct: 883 EVLLRWIHPEKGMVSPLQFIPLAEETGLIVPIGEWVLEEACATLAKWSLESEKQHLSIAV 942 Query: 635 NLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGL 694 N+S + F + V +A+ G + L +EITE+++ + ++ +++ L+ GV Sbjct: 943 NISVVQFSKDNFVQTVLNALKTSGANPQLLKLEITETLLANNIPDVKAKMKELQQHGVTF 1002 Query: 695 SVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAE 754 S+DDFGTG+S LS L LP+ ++KID+ FV + A+ +A+ ++ S+ L V+AE Sbjct: 1003 SIDDFGTGYSSLSYLKQLPINQLKIDQGFVRDIINSSNDRAIAQAVITLADSIELQVIAE 1062 Query: 755 GVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 GVET+ Q +L+ + C QGY + +P EE+ Sbjct: 1063 GVETEAQRALLQSMGCHTYQGYLYGKPCRIEEL 1095 Score = 119 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 59/381 (15%), Positives = 133/381 (34%), Gaps = 39/381 (10%) Query: 16 PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRH 75 L +I+ N + + L ++ ++G + ++P +L E ++ Sbjct: 179 SILATLPDMVFVIDRNFRFLVCKEHPDLLK--PQQAILGRTVHEILPNELGHQLVECLKQ 236 Query: 76 NREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQT 135 + E K K+ L ++R+ S ++ + + Sbjct: 237 AFCNNDVIHHNYTFE-----KSNQSF--EARYKKIDDN---EVLVVIRNTSAQVEAQSEI 286 Query: 136 RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNR 195 R+L V++ D + ++ N AF+ + GY I E G +P LL + Sbjct: 287 RRLSEVARQTTNGVVITDVKGRVIWINEAFSFLTGYSIEEMQGKKPGELLQGEDTDPATV 346 Query: 196 IRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIR 255 ++ L + + + ++ W++ + +P++ L + +DIT+E+Q Sbjct: 347 AIMRDALAQQNGFNVDVVNYSKAQNSYWVRIACNPLFSESGSLSGYIAIETDITKEKQDE 406 Query: 256 QLEGNILAAMCSSPPFHEMGE--IICRNIESVLNESHVSLFALRNGMPIH-----WASSS 308 +L N + + + +G + E ++N+ +L + W + Sbjct: 407 ELIRNSQNLLKAVIDANNIGTWHFNIQTGELIINDKWAALLGYTLSELLPANRYTWERLT 466 Query: 309 HGAEIQN-----AQSWSATI---------RQRDGAPAGI-----LQIKTSSGAETSAFIE 349 H ++ + S I + ++G I + +T G + Sbjct: 467 HPDDLAYCTTILEKHVSGLIPIYEANLRMKHKNGEWIWINTRGRISSRTYDGKAL-WLLG 525 Query: 350 RVADISQHMAALALEQEKSRQ 370 DI+ + A +KSRQ Sbjct: 526 THFDINDQIIAEKALSDKSRQ 546 >UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Proteobacteria RepID=A8H6Y6_SHEPA Length = 1064 Score = 717 bits (1852), Expect = 0.0, Method: Composition-based stats. Identities = 193/812 (23%), Positives = 352/812 (43%), Gaps = 49/812 (6%) Query: 13 IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEY 72 +F MG + + E + NP+ ++ Y +E++ + L+ D + + Sbjct: 205 LFKSHFHSGNMGIAITDIAHEWIKVNPSLCQMLKYTEQELLSLSWLDLMSADDFQLYKHH 264 Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL--ALVRDASVEMA 130 + +G R+ +L L KD + ++T ++ + +V + + S + A Sbjct: 265 LLRMLDG---RINEFELDLCLIAKDETIVYTHMTVACQRVQSRVELIITGFLNRTSQKEA 321 Query: 131 QKEQT---RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA--SGMQPDTLL 185 +KE+ QL + + + D I++ N + G I + Sbjct: 322 EKEKLASQEQLGLVLGSSELGFWDWDIRNDIIERNEHCAALLGCDIDTLNRQQKLWGDSI 381 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV-YDVLAHLQNLVMT 244 + + R L +T + + E+ + T E +WI S + D + Sbjct: 382 HPEDRVRVLRSIKAHLSGETEQHKVEYRIRTLASETLWILDSGKVMSRDESGCPLRMCGI 441 Query: 245 FSDITEERQIRQLE-------GNILAAMCSSPP-------FHEMGEIICRNIESVLNESH 290 +DIT+ +++ + N AM +I V N++ Sbjct: 442 HTDITDRKRVEESLKLAASVYNNSREAMSVQDDKGLIININAAFTDITGYTESEVKNQNI 501 Query: 291 VSLFALRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGA---PAGILQIKTSSGAETS 345 L RN A ++ W + R+++G L + A+T Sbjct: 502 KILQCSRNNRS---AYEQMHMAVEEEGRWQGEVWLRRKNGEEFVVWLTLNALFDAEAQTQ 558 Query: 346 AFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV----DKA 401 + +DI+ E++++ + I + +D +TGLPNR L +YL+ + + Sbjct: 559 RHVALFSDIT--------EKKQAEKIIWKQANYDTLTGLPNRRMLLDYLNAEILKSDSRE 610 Query: 402 VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE 461 + + +D+ ++V D+LG+ D L E R + ++ + R+ G +F +V Sbjct: 611 QHFALMFLDLDYFKEVNDTLGHDMGDMLLSEAAKRLKACIRDSDVVARLGGDEFTIVLSG 670 Query: 462 -NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDY 518 D+ + ++A + +++P + ++ ++ SIGI+ D + LL A AM Sbjct: 671 VTDIKGVDKVAKHILTRIAEPYNLGEETAYISASIGITLYPDDASTIEGLLKHADQAMYA 730 Query: 519 IRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEAL 578 + G N + +F+P+M K R+ L L+ AI++++ +L YQP + + G EAL Sbjct: 731 AKDEGRNRFHYFTPSMQRYAKYRMRLIQDLRSAIADHEFELYYQPIVSLQGGLGLKAEAL 790 Query: 579 ARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSA 638 RW P G V P FI +AEE G I IG WV +A RQ A WR + +S+N S Sbjct: 791 IRWRHPKRGLVSPIEFIAVAEETGLIIEIGNWVFQQAARQSALWRDRFGIEVQISINKSP 850 Query: 639 LHFRSNQ-LPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVD 697 + FR N + + + + + +EITE ++++ ++ I ++ RD G+ +S+D Sbjct: 851 VQFRDEGESINSWVNLLKTLNLTNNNICIEITEGLLLDGNSAISSKLTQYRDSGIQISLD 910 Query: 698 DFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVE 757 DFGTG+S L+ L + +KID+SF + L EAI + L + V+AEGVE Sbjct: 911 DFGTGYSSLAYLKKFDIDFLKIDQSFTRNLDSNSDDFTLCEAIIVMAHKLGMKVIAEGVE 970 Query: 758 TKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPG 789 T Q ++L C QGY FSRP+P E+ Sbjct: 971 TDYQRKILANAGCDFGQGYLFSRPVPVEKFEQ 1002 Score = 48.9 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 32/261 (12%), Positives = 84/261 (32%), Gaps = 33/261 (12%) Query: 119 LALVRDASVEMAQKEQTRQLIIAVDHLDRP---VIVLDPERHIVQCNRAFTEMFGYCISE 175 + L R +E QK + + ++ H + + D ++ N + +M Y E Sbjct: 184 ILLSRRIEIERDQKIKLQDHLLFKSHFHSGNMGIAITDIAHEWIKVNPSLCQMLKYTEQE 243 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL 235 + L++ +F L+ L + + + L+ + ++ +++ V Sbjct: 244 LLSLSWLDLMSADDFQLYKHHLLRMLDGRINEFELDLCLIAKDETIVYTHMTVAC-QRVQ 302 Query: 236 AHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFA 295 + ++ ++ F + T +++ + + ++G ++ + + + Sbjct: 303 SRVELIITGFLNRTSQKEAEKEKL---------ASQEQLGLVLGSSELGFWDWDIRNDII 353 Query: 296 LRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADIS 355 RN + + W +I D + + I Sbjct: 354 ERNEHCAALLGCDIDTLNRQQKLWGDSIHPED-------------------RVRVLRSIK 394 Query: 356 QHMAALALEQEKSRQHIEQLI 376 H++ EQ K I L Sbjct: 395 AHLSGE-TEQHKVEYRIRTLA 414 >UniRef50_Q2BL49 Sensory box/GGDEF domain/EAL domain protein n=2 Tax=cellular organisms RepID=Q2BL49_9GAMM Length = 1014 Score = 717 bits (1851), Expect = 0.0, Method: Composition-based stats. Identities = 198/682 (29%), Positives = 321/682 (47%), Gaps = 37/682 (5%) Query: 132 KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFP 191 +EQ QL + + + + NR F+++F + G + E Sbjct: 348 REQENQLDAIFHNTPSAMFLKSTALTYLTANRRFSDLFVGEGIDIIGKTDADIFP-EEEA 406 Query: 192 ADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEE 251 R Q++ Q EF L T G + ++ P+ + L + +DI+++ Sbjct: 407 KLIRETDIQVIKTRQTQQTEFSLTTLDG-PRYFLSTKFPMINERGELYAIGGITTDISDK 465 Query: 252 RQIRQLEGNILAAMCSSPPFHEMGE-IICRNIES--VLNESHVSLFALRNGMPIHWA--- 305 + A + F E I+ N + + N S + + +A Sbjct: 466 VKAE------REAEVTQQVFESAAEAILIYNPDGKVITNSSFNRITGYDDKKARLFALSI 519 Query: 306 ---SSSHGAEIQNAQSWSAT-IRQR-DGAPAGI---LQIKTSSGAETSAFIERVADISQH 357 A + W IR++ +G P I + +S+ E S+++ +DIS Sbjct: 520 LKDHPEIDATLSKTGRWQGESIRRKANGEPLPIWLSISALSSTKTEQSSYVAVFSDIS-- 577 Query: 358 MAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDH 413 E +++ Q +E+L +D +T LPNR ++ ++ + +A + + +D Sbjct: 578 ------ELKEAEQKLEKLAHYDNLTSLPNRTLFYDRIESSLARAARNGKKTALLFVDIDR 631 Query: 414 IQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEND-VSNITQIAD 472 + V D+ G+ DQ L+E R ++ + R+ G +F ++ E D + + IA Sbjct: 632 FKQVNDNHGHHTGDQLLVEAARRISAHIRLGDTVARLGGDEFTVILSELDGLDPVQDIAR 691 Query: 473 ELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFF 530 ++ + P +DDK + SIGI+ D G+N + LL A AM ++++ G N FF Sbjct: 692 RIQKSLRDPFRLDDKEIFSSASIGIAMYPDDGRNAESLLKHADVAMYHVKERGRNDILFF 751 Query: 531 SPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVP 590 A+NE + R L LK AI+ QL +VYQP+ E+ EAL RW P G + Sbjct: 752 DKAINEQAEARAQLEDNLKTAINTQQLFMVYQPRFNISGTEILSAEALIRWKHPEQGFIS 811 Query: 591 PSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQV 650 P FIPLAE G I +GRWV+ +AC+ EW +SVNLSA + L + Sbjct: 812 PGDFIPLAESCGLIVELGRWVLMQACQAAQEWNENTGQNTPVSVNLSARQLHDSSLLIDI 871 Query: 651 SDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLV 710 +A++ G+D L +EITE+M+++ + R++ +R +GV LSVDDFGTG+S L L Sbjct: 872 ENALNQTGLDPSLLELEITETMVIQDMETVISRLEAIRTIGVRLSVDDFGTGYSSLIYLK 931 Query: 711 SLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHC 770 LPV+ +KIDKSF+D L++A+ S+ SL L VVAEGVET+ Q L + HC Sbjct: 932 RLPVSTVKIDKSFIDDVPGSSGSENLVKAVISMSHSLALNVVAEGVETEAQLSFLTENHC 991 Query: 771 RVIQGYFFSRPLPAEEIPGWMS 792 IQGY ++P AE + M Sbjct: 992 DEIQGYLLAKPDSAETLQRLMR 1013 Score = 42.7 bits (100), Expect = 0.053, Method: Composition-based stats. Identities = 50/310 (16%), Positives = 98/310 (31%), Gaps = 52/310 (16%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A+ A+ + E ++ N + +V+ N + ++ GY ++ L + Sbjct: 468 AEREAE-VTQQVFESAAEAILIYNPDGKVIT-NSSFNRITGYDDKKA------RLFALSI 519 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSK--IWTRFALSKVSAEGKVYYLALVR 123 HPE + G+ E K +G IW + + + Y+A+ Sbjct: 520 LKDHPEIDATLSKTGR-----WQGESIRRKANGEPLPIWLSISALSSTKTEQSSYVAVFS 574 Query: 124 DASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIVQCNRAFTE------MFGYCISE 175 D S +++ +L + L + D I + I Sbjct: 575 DISELKEAEQKLEKLAHYDNLTSLPNRTLFYD---RIESSLARAARNGKKTALLFVDIDR 631 Query: 176 AS------GMQP-DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASI 228 G D LL IRL + + D+ +L G + Sbjct: 632 FKQVNDNHGHHTGDQLLVEAARRISAHIRLGDTVARLGGDEFTVILSELDG--------L 683 Query: 229 SPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNE 288 PV D+ +Q + D R + I ++ + RN ES+L Sbjct: 684 DPVQDIARRIQ---KSLRD-----PFRLDDKEIFSSASIGIAMYPDD---GRNAESLLKH 732 Query: 289 SHVSLFALRN 298 + V+++ ++ Sbjct: 733 ADVAMYHVKE 742 >UniRef50_B9M6C9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9M6C9_GEOSF Length = 845 Score = 716 bits (1850), Expect = 0.0, Method: Composition-based stats. Identities = 166/560 (29%), Positives = 277/560 (49%), Gaps = 24/560 (4%) Query: 250 EERQIRQLEGNILAAMCSSPPFHEMGEI----ICRNIESVLNESHVSLFAL-------RN 298 EERQ + L + P F E+ + R + A+ Sbjct: 291 EERQKSEERYRYLFQNANDPIFIIDRELKFINVNRRAMDLFGYGLDEFVAMNMVDLVPEE 350 Query: 299 GMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHM 358 +P ++ S IR + G + +I +S E + + + H+ Sbjct: 351 QIPRIQGELKKMESMEALDKLSTNIRTKWGYSLNV-EISSSPFVERNNVMGSI-----HI 404 Query: 359 AALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHI 414 E +K I D +TGL NR ++L + + V + +D Sbjct: 405 VRDVTESKKMEDEIRYQATHDILTGLANRMLFMDHLALSISQGHRYNEIQAVMFLDLDRF 464 Query: 415 QDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLENDVSNITQIADE 473 + + DSLG+A D+ L + R +E ++ + RI G ++ +L++ + T IA++ Sbjct: 465 KSINDSLGHAAGDKLLQLISGRLKECVRETDTVARIGGDEYNILITQMAHPEDATAIANK 524 Query: 474 LRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFS 531 + + ++KP ID +T+SIGIS G++ + LL A A+ + ++ G N +QF++ Sbjct: 525 ILSSMNKPFAIDGHQLHVTISIGISLYPTDGEDAETLLKNADIALYHAKEQGRNNYQFYN 584 Query: 532 PAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPP 591 PA+N ER+ + L++A+ ++L ++YQPQ+ +TG++ G EAL W P G + P Sbjct: 585 PALNTRTLERVKMENRLRQALERHELVVLYQPQVAMDTGQVTGAEALVYWLHPELGLLSP 644 Query: 592 SRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVS 651 FIP+AEEIG I +I WV+ AC Q W+ + ++VN+S+ FR L +QV Sbjct: 645 GHFIPMAEEIGFITDIDEWVLETACAQNKAWQDEGYRSFNVTVNMSSKQFRRPDLVDQVR 704 Query: 652 DAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVS 711 ++A G+ L +EITE M+ + L M VG ++DDFGTG+S LS L Sbjct: 705 RVLNATGLPPRFLELEITEGTAMKDIEYTIPSLNTLTGMEVGFAIDDFGTGYSSLSCLKK 764 Query: 712 LPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCR 771 LP+ ++KIDKSF+ T+ A++ I ++ +L L V+AEGVE +Q E L + HC Sbjct: 765 LPIRKLKIDKSFIFGVNTDPNDKAIVATIIAMAHNLKLEVIAEGVEDADQLEFLHQNHCD 824 Query: 772 VIQGYFFSRPLPAEEIPGWM 791 +QG+ +SRP+PAE+ + Sbjct: 825 QMQGFLYSRPIPAEDFRRLI 844 Score = 63.9 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 91/241 (37%), Gaps = 22/241 (9%) Query: 47 YKREEVI--------GNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKD- 97 Y EE++ +I + + R + +IR E + + L + Sbjct: 202 YDPEEMVFSRFQLDGQQSILVTEQTNRRFINDYHIRSLIEAPLTSGDSIIGAFSLHYHNP 261 Query: 98 GSKIWTRFALSKVSAEGKVY--YLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPE 155 GS + S+ KV +++ + +++ + + + P+ ++D E Sbjct: 262 GSWF----SDSQYDFAHKVAKTLSMTLKNYLLYEERQKSEERYRYLFQNANDPIFIIDRE 317 Query: 156 RHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLL 215 + NR ++FGY + E M L+ + P + L+++ A D+ + Sbjct: 318 LKFINVNRRAMDLFGYGLDEFVAMNMVDLVPEEQIPR-IQGELKKMESMEALDKLSTNIR 376 Query: 216 TRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQL-----EGNILAAMCSSPP 270 T+ G + ++ S SP ++ + D+TE +++ +IL + + Sbjct: 377 TKWGYSLNVEISSSPFV-ERNNVMGSIHIVRDVTESKKMEDEIRYQATHDILTGLANRML 435 Query: 271 F 271 F Sbjct: 436 F 436 Score = 55.4 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 53/155 (34%), Gaps = 7/155 (4%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 L + ++ + + +I+ + + N A L+GY +E + N+ L+P Sbjct: 289 LYEERQKSEERYRYLFQNANDPIFIIDRELKFINVNRRAMDLFGYGLDEFVAMNMVDLVP 348 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSK-VSAEGKVYYLAL 121 + P ++ + K G + + S V + + + Sbjct: 349 EEQIPRIQGELKKMESMEALD----KLSTNIRTKWGYSLNVEISSSPFVERNNVMGSIHI 404 Query: 122 VRDASVEMAQKEQTRQLII--AVDHLDRPVIVLDP 154 VRD + +++ R + L ++ +D Sbjct: 405 VRDVTESKKMEDEIRYQATHDILTGLANRMLFMDH 439 >UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnetospirillum RepID=A4U4T7_9PROT Length = 828 Score = 716 bits (1849), Expect = 0.0, Method: Composition-based stats. Identities = 171/711 (24%), Positives = 299/711 (42%), Gaps = 34/711 (4%) Query: 107 LSKVSAEGKVYYLALVRDASVEMAQKEQTR---QLIIAVDHLDRPVIVLDPERHIVQCNR 163 L K +G + A+ A R + + V++ D +V+ N Sbjct: 111 LVKGQGDGNLVRRAIFYAIERSHAASALKRSEGRFRALFANAGLGVVLADAHGRMVEANP 170 Query: 164 AFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIW 223 AF M GY E G + + + + ++ +R + L Q + + G IW Sbjct: 171 AFLSMVGYGEVELRGEKFRDITHPDDIGLNDTLRAEVLDGSRDGFQLTKRYIAKDGRIIW 230 Query: 224 IKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPP---FHEMGEIICR 280 K + + + + V DITE +++ +S + I Sbjct: 231 AKLTCTVMREADGQQPFTVTVVEDITERKRLEDNMRLAATVFENSGDGLFVTDAENRIIH 290 Query: 281 NIESVLNESHVSLFALRNGMPIHWASSSHGAEIQ--------NAQSWSATI--RQRDGAP 330 + + + + P AS H + W I R++DG Sbjct: 291 VNPAFTRITGFTADEVLGRNPRLLASGRHDHDFFIQLWTVLLRDGKWQGEIWDRRKDGEM 350 Query: 331 AGI---LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNR 387 + + + + F+ ++DI+ +++ + + DP+T LPNR Sbjct: 351 FAGWQNIAVVRDTDGKVQNFVAVISDITT--------RKQVEERLSYAANHDPLTRLPNR 402 Query: 388 NNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKP 443 L + +A + I +D + V D++G+ D L +V R ++ Sbjct: 403 TLFQERLTRAIARASRNHNLVALLFIDLDRFKQVNDTMGHLAGDMLLQQVAERLSSCIRQ 462 Query: 444 DQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD-- 500 + R+ G +F ++ + D + + ++ ++ +P+ + ++ SIG+S Sbjct: 463 GDTVARLSGDEFTIILEDVQDPRDAAVVGHKVLRLLQEPVALTGGEAHISSSIGVSLYPT 522 Query: 501 LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLV 560 + LL A AM + G N QF S A+N ERL L AL+ A+ Q L Sbjct: 523 DAGDPQTLLKLADAAMYRAKHLGRNSCQFHSEAVNAEAFERLALENALRGAVDQGQFLLH 582 Query: 561 YQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLA 620 YQP ++G +EAL RW P G V P++F+ LAEE G I IGRWV +ACRQ Sbjct: 583 YQPIFDVKSGRAVAVEALLRWRHPEVGVVAPNQFLALAEETGMIVPIGRWVFDQACRQAK 642 Query: 621 EWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEI 680 WR L +NLS R L V+ A+ + L +E+ E+ +++ + Sbjct: 643 LWRDAGHVDLRLHINLSPRQLRQPDLIEMVAAALEVSQLPPQALVLEVMETCVIDKAFDP 702 Query: 681 FKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAI 740 +GVGL++D+FG+G+S + L LPVT +K+ +SFV + + ++ AI Sbjct: 703 SALFARFAALGVGLAIDEFGSGYSSFAFLRRLPVTILKVAQSFVRNLSSSEDESEIVTAI 762 Query: 741 TSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 ++ + L++TVVA G+E K Q + L C +QG+ S+PLP E+ ++ Sbjct: 763 VALARGLHMTVVAPGIENKAQLDFLTGFGCDKVQGFLLSKPLPGTEMTEFL 813 Score = 170 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 75/358 (20%), Positives = 131/358 (36%), Gaps = 21/358 (5%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A ++G F +G VL + + ++ NPA + GY E+ G + D Sbjct: 137 ALKRSEGRFRALFANAGLGVVLADAHGRMVEANPAFLSMVGYGEVELRGEKFRDITHPDD 196 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRF--ALSKVSAEGKVYYLALVR 123 + +G + +G + KDG IW + + + + + + + +V Sbjct: 197 IGLNDTLRAEVLDGSR---DGFQLTKRYIAKDGRIIWAKLTCTVMREADGQQPFTVTVVE 253 Query: 124 DASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDT 183 D + ++ R ++ + V D E I+ N AFT + G+ E G P Sbjct: 254 DITERKRLEDNMRLAATVFENSGDGLFVTDAENRIIHVNPAFTRITGFTADEVLGRNP-R 312 Query: 184 LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVM 243 LL D I+L +L + + Q E + GE +I+ V D +QN V Sbjct: 313 LLASGRHDHDFFIQLWTVLLRDGKWQGEIWDRRKDGEMFAGWQNIAVVRDTDGKVQNFVA 372 Query: 244 TFSDITEERQIRQL-----EGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRN 298 SDIT +Q+ + + L + + F E N + L Sbjct: 373 VISDITTRKQVEERLSYAANHDPLTRLPNRTLFQERLTRAIARASRNHNLVALLFIDLDR 432 Query: 299 GMPIHWASSSHGAEI---QNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVAD 353 ++ ++ Q A+ S+ IRQ D + SG E + +E V D Sbjct: 433 FKQVNDTMGHLAGDMLLQQVAERLSSCIRQGD-------TVARLSGDEFTIILEDVQD 483 Score = 75.1 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 52/141 (36%), Gaps = 8/141 (5%) Query: 3 LTDADNAADGIFFPA--LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 +T+ D + A E + G + + + ++ NPA ++ G+ +EV+G N +L Sbjct: 255 ITERKRLEDNMRLAATVFENSGDGLFVTDAENRIIHVNPAFTRITGFTADEVLGRNPRLL 314 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYY 118 H R E+ +KDG W A+ + + + Sbjct: 315 ASGR----HDHDFFIQLWTVLLRDGKWQGEIWDRRKDGEMFAGWQNIAVVRDTDGKVQNF 370 Query: 119 LALVRDASVEMAQKEQTRQLI 139 +A++ D + +E+ Sbjct: 371 VAVISDITTRKQVEERLSYAA 391 >UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=Q39WZ5_GEOMG Length = 739 Score = 716 bits (1849), Expect = 0.0, Method: Composition-based stats. Identities = 170/589 (28%), Positives = 278/589 (47%), Gaps = 25/589 (4%) Query: 221 KIWIKASISPVYDVLAHLQNLVMTFSD-ITEERQIRQLEGNILAAMCSSPPFHEMGEIIC 279 +W+ + + + ++ ++ +D + E + + + S + Sbjct: 150 WLWVSLLNAAMAAIASYFMTVIRRETDAVREGEERLATFLDTANDLIHSVTPDGRLLYVN 209 Query: 280 RNIESVLNESHVSLFALRNGMPIHWASSS-HGAEIQNA------QSWSATIRQRDGAPAG 332 + L S A+ +H S AE+Q A +DG Sbjct: 210 EAWQRTLGYSAEEADAVPFFDILHPDSREQCCAELQRVVSGDALSPMEAVFTAKDGRSVI 269 Query: 333 IL-QIKTSSGAETSAFIERV-ADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNL 390 + + + G + S+ I + DI+ E++ + + + +L D +TGLPNR Sbjct: 270 VEGSLSCAHGGDESSVIWSICRDIT--------ERKHAEEQLYRLAHHDTLTGLPNRILF 321 Query: 391 HNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQY 446 + L A V + +D + + D+LG+ D L +V +R ++ Sbjct: 322 MDRLQQAKALANRYRYQVAVLFLDLDRFKIINDTLGHPVGDHLLQQVAHRIAGCVREVDT 381 Query: 447 LCRIEGTQFVLVSLEND-VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGK 503 + RI G +F ++ + D V ++ ++ ++ ++ P ID +T SIGIS G Sbjct: 382 VARIGGDEFTIILVNVDTVEDVKRMGQKILKTLAAPFNIDTHELFVTASIGISLFPSDGD 441 Query: 504 NRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQP 563 N D L+ A AM ++ G N QF+SP M+ +RL+L +L++A+ N + ++ YQP Sbjct: 442 NLDQLVKKADIAMYCVKGEGRNNVQFYSPQMDANADKRLLLETSLRKALDNREFRVYYQP 501 Query: 564 QIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWR 623 ++ + + +EAL RW P+ G V P FIPLAEE G I IG WV+ AC Q EW Sbjct: 502 KVDIVSKRITAMEALIRWDHPILGLVSPGEFIPLAEETGLIIPIGEWVLRAACFQNCEWV 561 Query: 624 SQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKR 683 Q I ++VNLS F+ L + + G+ L +EITES++M++ Sbjct: 562 RQGIPPMRVAVNLSGYQFQQKNLLETIRGILDETGLTADLLELEITESVIMQNPDFAVSV 621 Query: 684 IQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSI 743 + LRD+GV +S+DDFG G+S L+ L V +KIDKSFV A+ AI ++ Sbjct: 622 LNQLRDLGVHISIDDFGIGYSSLAHLKRFSVNTLKIDKSFVRDVEINSADAAIATAIIAM 681 Query: 744 GQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 G SLNL V+AEGVET+ Q L C +QGY FS P+P E++ +M Sbjct: 682 GNSLNLKVIAEGVETEGQLSFLSDNKCDEVQGYLFSTPMPPEKVAEFMR 730 Score = 72.0 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 63/166 (37%), Gaps = 5/166 (3%) Query: 99 SKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHI 158 + +W + ++A + + R+ A +E +L +D + + + P+ + Sbjct: 149 TWLWVSLLNAAMAAIASYFMTVIRRET---DAVREGEERLATFLDTANDLIHSVTPDGRL 205 Query: 159 VQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRT 218 + N A+ GY EA + +L+ P+ LQ+++ A E + + Sbjct: 206 LYVNEAWQRTLGYSAEEADAVPFFDILH-PDSREQCCAELQRVVSGDALSPMEAVFTAKD 264 Query: 219 GEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAA 264 G + ++ S+S + + DITE + + + Sbjct: 265 GRSVIVEGSLSCAHGGD-ESSVIWSICRDITERKHAEEQLYRLAHH 309 Score = 70.1 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 84/249 (33%), Gaps = 16/249 (6%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 TDA + L+ + + +++ N A ++ GY EE ++ Sbjct: 175 TDAVREGEERLATFLDTANDLIHSVTPDGRLLYVNEAWQRTLGYSAEEADAVPFFDILHP 234 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL-ALV 122 D R ++ G E KDG + +LS + + ++ Sbjct: 235 DSREQCCAELQRVVSGDALS----PMEAVFTAKDGRSVIVEGSLSCAHGGDESSVIWSIC 290 Query: 123 RDASVEMAQKEQTRQL--IIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 RD + +EQ +L + L ++ +D + +A + Y ++ + Sbjct: 291 RDITERKHAEEQLYRLAHHDTLTGLPNRILFMDRLQQA----KALANRYRYQVA-VLFLD 345 Query: 181 PDTLLNIPEFPADNRIR--LQQLLWKTARDQDEFLLLTRTG--EKIWIKASISPVYDVLA 236 D I + LQQ+ + A E + R G E I ++ V DV Sbjct: 346 LDRFKIINDTLGHPVGDHLLQQVAHRIAGCVREVDTVARIGGDEFTIILVNVDTVEDVKR 405 Query: 237 HLQNLVMTF 245 Q ++ T Sbjct: 406 MGQKILKTL 414 >UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6N3_NITMU Length = 1025 Score = 715 bits (1847), Expect = 0.0, Method: Composition-based stats. Identities = 194/841 (23%), Positives = 350/841 (41%), Gaps = 76/841 (9%) Query: 19 EQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNRE 78 E + + +AE+++ Y E+ ++D+L+ D R +E Sbjct: 165 ETMKQALASTAPHLRIESV-QSAEEVFSYLAEQDRKTDVDVLL-LDYRLPGASATDVLKE 222 Query: 79 GGKARVEGMSRELQLEKKD----------GSKIWTRFALSKVSAEGKVYYLALVRDASVE 128 + R + L + +D G+ + + V +R S Sbjct: 223 LCQVRGLDLPIILFIGSEDEEIARQSLKLGAADYVVKTAGYLQRLPTVIENVWLRAESNR 282 Query: 129 MAQ--KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 + E+ +L +A + + + + + N E++G Sbjct: 283 RERVLLEERTRLALATEAAAIGIWEWNTATNEMIWNDRMYEIYGIAPGSRITYDIWKSYT 342 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 P+ + L+++ + R Q +F +L + + + + +V T Sbjct: 343 HPDDLPQQEMHLERVSAENGRVQLDFRILREHKTVRHLHIAKALKWSTNPDELRIVGTAI 402 Query: 247 DITEERQIRQ-------LEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNG 299 DIT+ +Q +G I A + + + + +V Sbjct: 403 DITKRKQTDFAIQEHAMQQGLIAAFGQQALASGNLALLWGQAAVIASQGLNVEFCKALQL 462 Query: 300 MP----------IHWASSSHGAEIQ----------------------------------- 314 P + W G +I Sbjct: 463 APDFRSFVLKSGVGWQKDWIGRQISFTYENSQNRFVLASHQSVIVEDFQTETRFKPSSIL 522 Query: 315 ---NAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQH 371 N +S + + G P GIL + ++ ++ A A++++ + + Sbjct: 523 KSHNIRSCADVLISGAGGPYGILGAYSPEPQRFTSSSINFLQSLANILATAIDRKTTEER 582 Query: 372 IEQLIQFDPMTGLPNRNNLHNYLDDLVDKA----VSPVVYLIGVDHIQDVIDSLGYAWAD 427 + L QFDP+T LPNR+ + L ++ A V +D + V D++G++ D Sbjct: 583 LTYLAQFDPLTELPNRSLFLDRLRQAMEHAHRNRRRVGVVFADLDRFKIVNDTMGHSTGD 642 Query: 428 QALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDD 486 + L+ V R ++ ++ + R+ G +F L+ + + T IA+++ + + P ++ Sbjct: 643 ELLIHVAKRLQQCVRSCDTVARLGGDEFALILSDLVQPEDATLIAEKVISALQVPFELET 702 Query: 487 KPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVL 544 + ++ S+GIS G + D LL A AM ++ G +QF+ P MNE RL + Sbjct: 703 QEIYVSASLGISIYPGDGTDADSLLRNADTAMFQAKEQGPAIYQFYLPQMNERAVARLKI 762 Query: 545 GAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEI 604 L+ A++ + L YQP+ GE+ G EAL RW P HG VPP +FI + E+ G I Sbjct: 763 ETQLRGALARREFVLHYQPKASLINGEITGFEALLRWQHPAHGLVPPLQFISVLEDTGLI 822 Query: 605 ENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQL 664 +G WV+ C Q+ EW+ Q + + +++NLSA F+ L + + + + A ID L Sbjct: 823 VAVGEWVVKTVCEQIREWQGQGLVLHPIAINLSARQFQQQDLDSIIGETLRATNIDPRLL 882 Query: 665 TVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFV 724 E+TES++M+ +Q L+ GV +S+DDFGTG+S L+ L P+ +KID++F+ Sbjct: 883 EFELTESVLMKEAEMAANALQNLKAFGVQISMDDFGTGYSSLAYLKRFPLDVLKIDRAFI 942 Query: 725 DRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPA 784 T+ + A+ + SL L VVAEGVET+ Q E L + C +QGY+FS+PLP Sbjct: 943 RDVTTDPDDATITVAMIKLAHSLGLKVVAEGVETRAQLEFLIRHGCDEMQGYYFSQPLPL 1002 Query: 785 E 785 E Sbjct: 1003 E 1003 >UniRef50_Q1LL50 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LL50_RALME Length = 873 Score = 715 bits (1847), Expect = 0.0, Method: Composition-based stats. Identities = 258/856 (30%), Positives = 405/856 (47%), Gaps = 76/856 (8%) Query: 4 TDADNAADGIFF-PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 T + + I ALEQ + V ++ +++ FN AAE LWG +R V+G +L Sbjct: 14 TRQERDSQKIMRTQALEQAIDAVVAVDARNQITLFNAAAEALWGLERTTVLGQCASVLAL 73 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALV 122 DLR A+ + + AR +G R ++L I+ S A K + L Sbjct: 74 GDLRVANGQ---SGQNLAIARADGTLRHVRLHIA----IFGTDGDSNPGAPAKQFAAFLH 126 Query: 123 RDASV-----EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 DAS R L + +DH + PV++ D I N FT + GY +A Sbjct: 127 DDASTGNEPGATLSPPGLRMLSLCLDHAENPVMITDAHGTICHLNGGFTRLLGYARHQAV 186 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV--L 235 G + LL + L L ++E L+ ++G+ W+ ++SP+ Sbjct: 187 GRRWQDLLMPINARPEQIPSLLAPLAAGLPLRNEALVPDKSGQPRWLSVAVSPIMASTQS 246 Query: 236 AHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFA 295 L N V +DIT + ++ L A+ P ++ +CR +E + + ++ Sbjct: 247 GGLVNTVWVLTDITATKVRESIQHRTLDALARDLPTAQIMNDLCRRVERMAPGTKAAVMR 306 Query: 296 LRNG--------------------MPIHWASSSHGAEI---------------------- 313 NG + I S S GA Sbjct: 307 ASNGHLRLVAMPSATPDLLAAFDSLQIGLQSGSCGAAAFLGHAVAVEDIAQDPRCETLRE 366 Query: 314 -----QNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKS 368 A +WS +R DG G + + F E + ++ + ALAL ++++ Sbjct: 367 TALAAGMAATWSTPVRAADGRVLGTFALCFNEPRLPDGFHENLVGVAADLCALALVRDQT 426 Query: 369 RQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYA 424 ++ I +L +D +TGLPNR L + DD V +A + + I +++ + V D G+ Sbjct: 427 QERIHRLAYYDALTGLPNRQLLLSRADDAVARANAHGTPLALLFINLNNFKRVNDVQGHG 486 Query: 425 WADQALLEVVNRFREKLKP---DQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKP 481 D+ L+EV +R + D + R+ G +F ++ + + IADEL + P Sbjct: 487 AGDRFLIEVASRLQFATAEHARDATVGRLSGDEFAVLLPGHGHAEALAIADELLRALDPP 546 Query: 482 IMID-DKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYI-RKNG---GNGWQFFSPAM 534 I + + SIGIS + ++R+ LL A A+ +++G GN + + Sbjct: 547 ITVAHGLSPSPSASIGISMLTEQTRDRETLLHHADLAVCQARKRSGPDLGNQICVYDTVL 606 Query: 535 NEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRF 594 + +R +L L+EAI + QL++ YQPQI +G L+ +EALARW P G + P+ F Sbjct: 607 ARRLGDRRMLECELREAIGSGQLQMRYQPQIHLASGNLWAVEALARWPHPHRGDIAPTVF 666 Query: 595 IPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAM 654 +PLAEE G I +G W + EAC Q A WR + +PA+SVNLS L R LP+ V+ A+ Sbjct: 667 VPLAEESGLIVALGYWAVREACAQQARWRRRGAAVPAISVNLSPLSIRDPALPDVVAQAL 726 Query: 655 HAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPV 714 + +LT+EITES+ ++H +E I LR +GV LS+DDFGTGFS LSRL+ LPV Sbjct: 727 RTHALPAGELTIEITESVFLDHTSEAEATIAALRKLGVRLSIDDFGTGFSSLSRLMQLPV 786 Query: 715 TEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQ 774 EIK+D+SF+ T + L+EA+ IG++ +LTVVAEGV + Q + L C V Q Sbjct: 787 DEIKLDRSFLVDLETSEATRTLVEAVIRIGRARDLTVVAEGVTSALQRQFLLDQGCHVGQ 846 Query: 775 GYFFSRPLPAEEIPGW 790 G+ F++PLPA I W Sbjct: 847 GFLFAQPLPAASIERW 862 Score = 44.3 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 29/218 (13%), Positives = 57/218 (26%), Gaps = 30/218 (13%) Query: 123 RDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPD 182 R + + Q A++ V+ +D I N A ++G + G Sbjct: 10 RARNTRQERDSQKIMRTQALEQAIDAVVAVDARNQITLFNAAAEALWGLERTTVLGQCAS 69 Query: 183 TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH----- 237 L L L + + G ++ I ++ Sbjct: 70 VL------------ALGDLRVANGQSGQNLAIARADGTLRHVRLHI-AIFGTDGDSNPGA 116 Query: 238 -LQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICR-NIESVLNESHVSLFA 295 + D GN A S P + + ++ ++H ++ Sbjct: 117 PAKQFAAFLHD-------DASTGNEPGATLSPPGLRMLSLCLDHAENPVMITDAHGTICH 169 Query: 296 LRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGI 333 L G + H A + W + + P I Sbjct: 170 LNGGFTRLLGYARHQAV---GRRWQDLLMPINARPEQI 204 >UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1I4_ACIDE Length = 830 Score = 715 bits (1847), Expect = 0.0, Method: Composition-based stats. Identities = 205/803 (25%), Positives = 339/803 (42%), Gaps = 67/803 (8%) Query: 35 MFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLE 94 + + ++L G E +G + +P + RP E R ++ EL Sbjct: 53 VDADEVFDQLRGTAIVEQLGAVARLGVPLECRPVVREPGR----------PVLAWELSAR 102 Query: 95 KKDGSKIWTRFA-LSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVI--V 151 + G I +S+V +EQ+ + Sbjct: 103 RVAGCSIMVTVRDVSEVETLRAALAACERSLEETRRELREQSDVFNTMEGLARTGHWRRI 162 Query: 152 LDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDE 211 DP ++ + ++ G+ E P+ ++ ++R ++ K A E Sbjct: 163 EDPGETVLLWSPGLCDIAGFDRQEWV--SPERAVSG--ILPEDRHVFEKAREKVAGADIE 218 Query: 212 FLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEE----RQIRQLEGNILAAMCS 267 + GE W+++ + + D+TEE Q+R+ I Sbjct: 219 YRWRRPDGEVRWMRSRVRRARSGDGMRVEM-GVVQDVTEEHRSAEQLREQLLFIQRIASR 277 Query: 268 SPPF------------------HEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSH 309 P F + E + N E V+ + + + ++ H S Sbjct: 278 IPGFIYEYRMHNDGASSVPYISDAVREFMGVNPEDVMRDHGLLMRSVVPDDAAH-VRRSA 336 Query: 310 GAEIQNAQSWSATIR--QRDGAPAG--ILQIKTSSGAETSAFIERVADISQHMAALALEQ 365 A ++N W R DG+ I + DI+ ++ Sbjct: 337 VASLRNLAPWQCEYRVSMPDGSVRWHITNAIPHREPDGSVVSHGFTMDIT--------DR 388 Query: 366 EKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSL 421 +++ Q IE+L +D +TGLPNR L + L V + I +D+ +D+ D+L Sbjct: 389 KRAEQEIERLAFYDALTGLPNRRMLLDRLQRAVAATSRTQQFGALLFIDLDNFKDLNDTL 448 Query: 422 GYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVS------LENDVSNITQIADELR 475 G+ D L +V R ++ + R G +FV++ L S +A++L Sbjct: 449 GHDMGDHLLSQVAARLLACVRETDTVARFGGDEFVVMLETLRPELTEAASQAEIVAEKLL 508 Query: 476 NVVSKPIMIDDKPFPLTLSIGISYDLGK--NRDYLLSTAHNAMDYIRKNGGNGWQFFSPA 533 +++P + + T SIGI+ + + D LL A AM + G N +FF P Sbjct: 509 ASLNQPFALGGQQHYSTPSIGITLFGDERLSVDELLKRADLAMYQAKGAGRNTQRFFDPD 568 Query: 534 MNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSR 593 M V R L A L++ ++ +L + YQP + L G+EAL RW P+ G + P+ Sbjct: 569 MQAAVNARSNLEADLRQGLARGELCVYYQPVVD-HRARLLGVEALVRWRHPVRGMISPAD 627 Query: 594 FIPLAEEIGEIENIGRWVIAEACRQLAEW-RSQNIHIPALSVNLSALHFRSNQLPNQVSD 652 FIPLAE+ G I +G+ V+ AC QL W + ++SVN+SA FR +V Sbjct: 628 FIPLAEQTGLILPLGQQVLQTACGQLQRWGERKQTRHLSVSVNVSARQFRQPGFVAEVLQ 687 Query: 653 AMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSL 712 + G D +L +E+TES+++ + R++ L+ GVG ++DDFGTG+S LS L L Sbjct: 688 TLQGCGADPRKLKLELTESLLLGDVEDTIARMEQLKREGVGFALDDFGTGYSSLSYLKRL 747 Query: 713 PVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRV 772 P+ ++KID+ FV LT+ A++ I ++ QSL+L VVAEGVET Q LR C Sbjct: 748 PLDQVKIDQGFVRDVLTDPNDAAIVRTILALAQSLDLEVVAEGVETTGQLAFLRLHGCEG 807 Query: 773 IQGYFFSRPLPAEEIPGWMSSVL 795 QGY F RP P E+I ++S L Sbjct: 808 FQGYLFGRPGPVEDIDAYLSHEL 830 Score = 91.6 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 91/245 (37%), Gaps = 22/245 (8%) Query: 29 NENDEVMFFNPAAEKLWGYKREEVIG--NNIDMLIPRDLRPAHPEYIRHNREGGKARVEG 86 + + V+ ++P + G+ R+E + + ++P D RH E + +V G Sbjct: 164 DPGETVLLWSPGLCDIAGFDRQEWVSPERAVSGILPED---------RHVFEKAREKVAG 214 Query: 87 MSRELQLEKKDGSKIWTRFALSKV-SAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHL 145 E + + DG W R + + S +G + +V+D + E EQ R+ ++ + + Sbjct: 215 ADIEYRWRRPDGEVRWMRSRVRRARSGDGMRVEMGVVQDVTEEHRSAEQLREQLLFIQRI 274 Query: 146 DRPV--------IVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN-IPEFPADNRI 196 + + D + + A E G + + + +P+ A R Sbjct: 275 ASRIPGFIYEYRMHNDGASSVPYISDAVREFMGVNPEDVMRDHGLLMRSVVPDDAAHVRR 334 Query: 197 RLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQ 256 L A Q E+ + G W + P + + + T DIT+ ++ Q Sbjct: 335 SAVASLRNLAPWQCEYRVSMPDGSVRWHITNAIPHREPDGSVVSHGFTM-DITDRKRAEQ 393 Query: 257 LEGNI 261 + Sbjct: 394 EIERL 398 >UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BHU8_9GAMM Length = 892 Score = 715 bits (1846), Expect = 0.0, Method: Composition-based stats. Identities = 175/691 (25%), Positives = 309/691 (44%), Gaps = 39/691 (5%) Query: 126 SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 E +L + + +D E + C+ + + E G + Sbjct: 201 ESERTSNHARHRLEATFSAIPDLLFEMDIEGRYLACHASDPDDLVAKPEELIGKSVFDFI 260 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 + E + L ++ + L + R + + S+S +D + + ++ Sbjct: 261 PLDEAQIIVEAIREADLKGISKGRQVTLQVGRGLREF--ELSVSRKHDDESSEHHFIVLS 318 Query: 246 SDITEERQIRQLEGNILAAMC--SSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIH 303 DITE ++ + A + I R + + P Sbjct: 319 RDITERKRHERELHIAATAFDSQEGMLITDAEHRILRVNNAFTRVTGYEAEEAIGNTPAF 378 Query: 304 WASSSHGAEIQNAQS--------WSATI--RQRDGAPAG---ILQIKTSSGAETSAFIER 350 S H + W + +++ G + +S E + ++ Sbjct: 379 LQSGKHSEDFYQTMMESLSKNNYWQGEVWNQRKSGEIYPQHLTITAVQTSAGEITNYVGA 438 Query: 351 VADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VV 406 DI+Q +++ I QL +D +TGLPNR +L LD + V Sbjct: 439 FTDITQ--------RKQDEADIHQLAFYDSLTGLPNRRSLQERLDSALSSCRHTRQLGAV 490 Query: 407 YLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSN 466 + I +D+ +++ D+ G+ D+ L+EV NR ++ + R+ G +F+++ V Sbjct: 491 FFIDLDNFKNLNDTAGHDQGDKLLVEVANRLNSCVRNADMVARLGGDEFIVILENLGVDE 550 Query: 467 ITQIAD------ELRNVVSKPIMIDDKPFPLTLSIGISYDLGKN-RDYLLSTAHNAMDYI 519 +A ++ + P+ I + + T SIGI+ K+ D ++ + AM Sbjct: 551 SNVLAQVKDIVAKVILTIQAPLTIGTQAYHPTCSIGIALFSEKDFSDEVMKRSDMAMYQA 610 Query: 520 RKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALA 579 + +G N ++FF P E + + A L+ A+SN QL+L YQPQ +T L G EAL Sbjct: 611 KSSGKNTYRFFDPVAEEALCSLARMDADLRFALSNQQLELHYQPQYRCQT--LIGAEALL 668 Query: 580 RWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN-IHIPALSVNLSA 638 RW P G V P+ FIPLAE+ G I IG WVI +AC+QL +W+ + ++VN+SA Sbjct: 669 RWKHPDRGMVSPAEFIPLAEDTGLILPIGEWVIRQACKQLQQWQERPETAELFIAVNVSA 728 Query: 639 LHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDD 698 F + V ++ +G+ +L +E+TES+++ + +++Q LR G+ ++DD Sbjct: 729 RQFCQDNFVESVRQLLNTYGVSAEKLKLELTESLVLMDVEDTIQKMQALRSYGIRFALDD 788 Query: 699 FGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVET 758 FGTG+S LS L LP+ +IKID+SF+ ++ +++AI ++GQ+L L V+AEGVET Sbjct: 789 FGTGYSSLSHLKRLPLDQIKIDRSFIRDVPEDQDDSEIVQAIIAMGQNLGLNVLAEGVET 848 Query: 759 KEQFEMLRKIHCRVIQGYFFSRPLPAEEIPG 789 EQ L ++ C IQG+ RP ++ Sbjct: 849 DEQLAFLTELDCLDIQGFLLGRPSSIDKFET 879 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 47/214 (21%), Positives = 84/214 (39%), Gaps = 5/214 (2%) Query: 48 KREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFAL 107 K EE+IG ++ IP D E IR G ++ ++ ++ + + + Sbjct: 247 KPEELIGKSVFDFIPLDEAQIIVEAIREADLKGISKGRQVTLQVGRGLR---EFELSVSR 303 Query: 108 SKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTE 167 + +++ L RD + + + A D +++ D E I++ N AFT Sbjct: 304 KHDDESSEHHFIVLSRDITERKRHERELHIAATAFD-SQEGMLITDAEHRILRVNNAFTR 362 Query: 168 MFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKAS 227 + GY EA G P L + D + + L K Q E ++GE + Sbjct: 363 VTGYEAEEAIGNTP-AFLQSGKHSEDFYQTMMESLSKNNYWQGEVWNQRKSGEIYPQHLT 421 Query: 228 ISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNI 261 I+ V + N V F+DIT+ +Q + Sbjct: 422 ITAVQTSAGEITNYVGAFTDITQRKQDEADIHQL 455 Score = 61.2 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 42/136 (30%), Gaps = 6/136 (4%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP 67 + + + G ++ + ++ N A ++ GY+ EE IGN L Sbjct: 327 HERELHIAATAFDSQEGMLITDAEHRILRVNNAFTRVTGYEAEEAIGNTPAFL----QSG 382 Query: 68 AHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRDA 125 H E ++ E+ ++K G ++ V Y+ D Sbjct: 383 KHSEDFYQTMMESLSKNNYWQGEVWNQRKSGEIYPQHLTITAVQTSAGEITNYVGAFTDI 442 Query: 126 SVEMAQKEQTRQLIIA 141 + + QL Sbjct: 443 TQRKQDEADIHQLAFY 458 >UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTY3_DESBD Length = 1075 Score = 715 bits (1846), Expect = 0.0, Method: Composition-based stats. Identities = 182/712 (25%), Positives = 315/712 (44%), Gaps = 40/712 (5%) Query: 117 YYLALVRDASVEMAQKEQTRQ-LIIAVDHLDRPVIVLDPE-RHIVQCNRAFTEMFGYCIS 174 + L R A + + + V + + R ++ NR F+++ GY + Sbjct: 375 FNTRLSRQVQERTAALSASERSFRAFFEMASVGVAQFEGDTRRFIKVNRKFSDLMGYSAA 434 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 E + P L++ ++ A + + E + + G W A+ISP++D Sbjct: 435 ELGTLSPRDLVHPDDWQASEEAMKSLVTKEQKEITLEKRYVRKGGGVFWGLATISPLWDQ 494 Query: 235 LAHLQNLVMTFSDITEERQIRQLE---GNILAAMCSSPPFHEMGEIICRNIESVLNESHV 291 H ++ + DIT ++ + + I + + Sbjct: 495 GEHPESYLAVVRDITVAKKAEEKLLLAAKVFENTVEGIVVTNTEGTIEQVNPGFTVITGY 554 Query: 292 SLFALRNGMPIHWASSSH--------GAEIQNAQSWSATI--RQRDGA----PAGILQIK 337 S P S H ++ W+ I R++DG I +K Sbjct: 555 SADEAVGSNPRILKSDRHAQHFYQEMWTKLTQDGHWAGEIWNRRKDGESYPEWLTISAVK 614 Query: 338 TSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDL 397 +G +T+ ++ DI+ E ++ + +E Q D +TG+PNR L + L Sbjct: 615 NEAG-QTTNYVSIFHDIT--------ELKRQQDALEYQAQHDALTGMPNRILLGDRLRMA 665 Query: 398 VDK----AVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGT 453 + + + +D+ + + D LG+ D+ L+++ R L+ L R+ G Sbjct: 666 LAQLARSGGKLALLFFDLDNFKTINDGLGHGVGDELLVDLSRRLERLLRSGDTLARLGGD 725 Query: 454 QFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIG--ISYDLGKNRDYLLS 510 +F+++ E V + IA + + + P D + +T SIG I+ D G L+ Sbjct: 726 EFLILLPEIESVDAASHIATRMLDALKAPFHHGDVEYFVTASIGLTIAPDDGNEAPKLIK 785 Query: 511 TAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETG 570 A AM + G N +Q+F+P M+ R+ + L++AI + +L YQP + ++G Sbjct: 786 NADMAMYRAKSMGRNNYQYFTPEMDVAAHRRISMEYKLRKAIEAQEFELFYQPLVHIQSG 845 Query: 571 ELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIP 630 + G EAL RW + P+ FIPLAEE I +G WV+ A Q W+ H Sbjct: 846 HILGAEALIRWRCEGK-LISPAEFIPLAEESALILPLGDWVLRTAAHQAKLWQDAG-HDL 903 Query: 631 ALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDM 690 +SVN+S+ F L + + + + +L EITESM+M ++ + LR+ Sbjct: 904 TMSVNISSRQFSGADLAVTLREVLLDTELRPGRLYFEITESMLMGDVSKAETTLLNLREA 963 Query: 691 GVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLT 750 G +DDFGTG+S LS L LP+ +KID+SF+ + A++ AI S+ ++LNL Sbjct: 964 GGTFFLDDFGTGYSSLSYLKRLPIDGLKIDRSFIKDITDDSDSRAIVAAIVSMARTLNLR 1023 Query: 751 VVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS---VLPLKI 799 +VAEGVET+ Q +L + V+QGY SRP+PA++ +S + PL I Sbjct: 1024 IVAEGVETQAQRGLLASMGPIVLQGYLASRPVPAQDFEALLSRDALLPPLVI 1075 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 96/256 (37%), Gaps = 7/256 (2%) Query: 4 TDADNAADGIFFPALEQNMMGAVLIN-ENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 T A +A++ F E +G + + N L GY E+ + L+ Sbjct: 387 TAALSASERSFRAFFEMASVGVAQFEGDTRRFIKVNRKFSDLMGYSAAELGTLSPRDLVH 446 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLA 120 D A E ++ + + + E + +K G W +S + +G+ YLA Sbjct: 447 PDDWQASEEAMKSLVTKEQKEI---TLEKRYVRKGGGVFWGLATISPLWDQGEHPESYLA 503 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 +VRD +V +E+ ++ ++V + E I Q N FT + GY EA G Sbjct: 504 VVRDITVAKKAEEKLLLAAKVFENTVEGIVVTNTEGTIEQVNPGFTVITGYSADEAVGSN 563 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 P +L + L + E + GE +IS V + N Sbjct: 564 P-RILKSDRHAQHFYQEMWTKLTQDGHWAGEIWNRRKDGESYPEWLTISAVKNEAGQTTN 622 Query: 241 LVMTFSDITEERQIRQ 256 V F DITE ++ + Sbjct: 623 YVSIFHDITELKRQQD 638 Score = 78.2 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 58/158 (36%), Gaps = 10/158 (6%) Query: 3 LTDADNAADGIFFPA--LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 +T A A + + A E + G V+ N + NP + GY +E +G+N +L Sbjct: 508 ITVAKKAEEKLLLAAKVFENTVEGIVVTNTEGTIEQVNPGFTVITGYSADEAVGSNPRIL 567 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYY 118 H ++ + + E+ +KDG W + K A Y Sbjct: 568 KSDR----HAQHFYQEMWTKLTQDGHWAGEIWNRRKDGESYPEWLTISAVKNEAGQTTNY 623 Query: 119 LALVRDASVEMAQKEQTRQLII--AVDHLDRPVIVLDP 154 +++ D + Q++ A+ + +++ D Sbjct: 624 VSIFHDITELKRQQDALEYQAQHDALTGMPNRILLGDR 661 >UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACK6_ALHEH Length = 857 Score = 714 bits (1845), Expect = 0.0, Method: Composition-based stats. Identities = 234/859 (27%), Positives = 363/859 (42%), Gaps = 92/859 (10%) Query: 5 DADNAADGIFFPALEQNMMGAVLINEND---EVMFFNPAAEKLWGYKREEVIGNN---ID 58 D+ N A LE + + + ++ + E+L GY + + + Sbjct: 12 DSPNPAFDDLHRVLEASPAVTYALTRDGQSLRPVYISAHIEELLGYPVADWMADPQFWRQ 71 Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA-EGKVY 117 L P D + RH EG + E ++ +DGS W L + A +G+ Sbjct: 72 CLHPDDRERVLAQSARHLPEGL------VDHEYRVRHRDGSYRWVHDRLRLMPARDGRPA 125 Query: 118 Y-LALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 + + +D + R L + RH+ + + G E Sbjct: 126 MAVGVWQDITHRARADRLLRTLSHLTARVTGDDFFRTLVRHLAEALDMRYVLLG----EL 181 Query: 177 SGMQPDTLLNIPEFPADNRIR-----------LQQLLWKTA--------RDQDEFLLLTR 217 G P + + AD IR ++L RD E LL Sbjct: 182 PGHPPTRV-HTRALYADGAIRPNVTYPLAGTPCARVLSDEPCHYANDVCRDFPEDELLR- 239 Query: 218 TGEKIWIKASISPVYDVLAHLQNLVMTFSD------ITEE----------------RQIR 255 E P+ + L+ D TE Q Sbjct: 240 --EMAVESYFGVPIRRADGTITGLLALMHDQPREISATERAVIALFAARAGTELARHQAE 297 Query: 256 QLEGNILAAMCSSPPFHEMGEIICR------NIESVLNESHVSLFA-----LRNGMPIHW 304 + I S + + R E++ L L++G Sbjct: 298 EQLQLIDQVFEGSRDAIIITDAQTRILQVNPAFEAISGYREEELVGRTPRLLQSGHQGPR 357 Query: 305 ASSSHGAEIQNAQSWSATI--RQRDGAPAGIL---QIKTSSGAETSAFIERVADISQHMA 359 +++ W + R+ DG L T+ E + +I +DI+ H Sbjct: 358 FYREMWEALKSRGHWQGELWNRRADGETYPSLLSVSAVTNDNDEVTHYIGIASDITSH-- 415 Query: 360 ALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS---PVVYLIGVDHIQD 416 + + QHI+ L +D +TGL NR L L+ ++ A ++ + +D ++ Sbjct: 416 ------KAAEQHIDYLAHYDTLTGLGNRRLLEEELERMLRNARGGRPFALFFLDLDRFKN 469 Query: 417 VIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRN 476 + D+LG+ D+ L EV +R R+ P LCRI G +F +++ IA +L Sbjct: 470 INDTLGHESGDRLLEEVADRLRDLAGPQATLCRIGGDEFAILAPGLSHRQTAGIARQLVE 529 Query: 477 VVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAM 534 +S+P I ++P +T S+G++ G R+ L+S A A+ Y++ +G N +QF P M Sbjct: 530 GISRPYEITERPLVVTCSVGVAVHPRDGTRREALISAADTALHYVKAHGSNHYQFHEPGM 589 Query: 535 NEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRF 594 ERL L L+EA+ + +L YQP + E + G EAL RWH P G +PP RF Sbjct: 590 TAAAAERLHLENDLREALLRGEFELYYQPVLDTERLTVCGAEALLRWHHPEAGLIPPDRF 649 Query: 595 IPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAM 654 IPLAEE G I IG WV+ EAC Q A WR + +SVN+S F ++LP V A+ Sbjct: 650 IPLAEETGLIRPIGTWVLREACAQAARWRRLGLTGMTVSVNVSGEQFWRDELPQAVRQAL 709 Query: 655 HAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPV 714 A + L +EITES++M R++ L+ MGVGLS+DDFGTG+S LS L P+ Sbjct: 710 EAQALAPDALVLEITESVLMHGSANTETRLRELKAMGVGLSLDDFGTGYSSLSYLKRFPI 769 Query: 715 TEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQ 774 +KIDKSFV + ++ L + + ++G L L VVAEGVE+ E +LR+ C +Q Sbjct: 770 DTLKIDKSFVRDMVRDEHDRTLAQTVIAMGHGLGLQVVAEGVESAEHLPLLRRARCDRVQ 829 Query: 775 GYFFSRPLPAEEIPGWMSS 793 GY FSRPLPA + W+ Sbjct: 830 GYHFSRPLPARALSRWIQQ 848 >UniRef50_C6E011 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=C6E011_GEOSM Length = 869 Score = 714 bits (1845), Expect = 0.0, Method: Composition-based stats. Identities = 167/483 (34%), Positives = 260/483 (53%), Gaps = 10/483 (2%) Query: 320 SATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFD 379 + ++ GA + + E +ER + + EQE + Q IE L +D Sbjct: 383 QVELLRQMGADIS-FALGNMAREERRLDVERA--LLEETTQRMNEQELNEQRIEYLAHYD 439 Query: 380 PMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVN 435 +T LPNR +L L ++ A V I +D +++ DSLG+ D+ L +V Sbjct: 440 TVTKLPNRFSLMARLGQALELAKRFSSRLAVIFIDLDRFKNINDSLGHHIGDRLLFQVAG 499 Query: 436 RFREKLKPDQYLCRIEGTQFVLVSL-ENDVSNITQIADELRNVVSKPIMIDDKPFPLTLS 494 R ++ ++ + R+ G +FV+V N + +++ +S+ ++ +T S Sbjct: 500 RLQDTIRSADIVARLGGDEFVVVLPLINSNISAAHAVRKIQQTLSQGYTVESHELNITPS 559 Query: 495 IGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAI 552 IGIS G+ L+ A AM + + G N +QFF+ MN V+ RLVL + L+ A+ Sbjct: 560 IGISVYPTDGETVQELMKNADLAMYHAKSAGRNSYQFFTQEMNLTVQARLVLESDLRTAL 619 Query: 553 SNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVI 612 +++ L YQPQI ++GE+ G+EAL RW P+ G V P FIP+AE+ G I +IG + + Sbjct: 620 ERDEMMLHYQPQIDLKSGEVVGVEALLRWRHPVRGAVAPDVFIPVAEDTGLILSIGEFAL 679 Query: 613 AEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESM 672 AC QLA W SQ + ++VNLSA F+ + LP+ ++D + A G+ H L +EITES Sbjct: 680 KSACEQLALWISQGLSPLRMAVNLSARQFKQSNLPSLLADILAATGVAAHLLELEITESS 739 Query: 673 MMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKR 732 M+ ++ LR+MGV L++DDFGTG+S LS L PV +KID+SFV T+ Sbjct: 740 AMDDPNTAIVHLRTLREMGVELAIDDFGTGYSSLSYLKLFPVNRLKIDRSFVRGIDTDSE 799 Query: 733 ILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 + A ++ +L VVAEGVET+ Q LR C ++QGYFFS PL A I +++ Sbjct: 800 DAEIAAATIALAHNLGKEVVAEGVETEAQCRFLRGQQCDILQGYFFSEPLSAAGIASYLA 859 Query: 793 SVL 795 + Sbjct: 860 ANR 862 >UniRef50_C6CKZ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Dickeya RepID=C6CKZ2_DICZE Length = 689 Score = 714 bits (1845), Expect = 0.0, Method: Composition-based stats. Identities = 176/683 (25%), Positives = 315/683 (46%), Gaps = 38/683 (5%) Query: 134 QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPAD 193 +D + V++ + H V N A+ ++GY E +G + + Sbjct: 8 SESLFQAILDRCPVGIAVINYDGHYVTVNPAYGAIYGYTQEEMAGRSFTMVFPESARDS- 66 Query: 194 NRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEE-- 251 R +Q L + E+ ++ R G + I + P + H + ++ DITE Sbjct: 67 VLARHRQFLDEGGTLGGEWTVMRRDGVILTIWSESVP-FAQHGHRADRLVYVLDITERQK 125 Query: 252 -RQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHG 310 R+ ++ + + + I + + S + + S H Sbjct: 126 AREQMKIAAAVYESTQEAIIVINTSRSIISINPAFTRLTGYSAADVVGQPSYIFRSDRHD 185 Query: 311 AEIQNA--------QSWSATI--RQRDGAPA---GILQIKTSSGAETSAFIERVADISQH 357 A+ A W + R++DG+ + + + ++ +DI+Q Sbjct: 186 ADFYTAMWRTVDEDGVWVGEMWDRKKDGSDYLKEITINVIKDAAGTPINYVGVFSDITQ- 244 Query: 358 MAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDH 413 ++K I + +D +T LPNR++ + L+ V+ A + LI +DH Sbjct: 245 -------RKKQEALIWRQANYDAVTTLPNRHHFQDKLERAVEHAKQSGRPMALMLIDLDH 297 Query: 414 IQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVS-NITQIAD 472 + V DSLG+ D LL V NR + ++ + R+ G +F ++ + + + +A Sbjct: 298 FKSVNDSLGHRAGDALLLAVSNRLTDCVQGADTIARLGGDEFAIILTDLHQNGDSGCLAR 357 Query: 473 ELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFF 530 L +++P ID + ++ SIGI+ + L A AM + G N + ++ Sbjct: 358 TLLAQLAQPFNIDGESMLVSASIGIALFPNDSDTLEELFKNADQAMYAAKSAGRNCFNYY 417 Query: 531 SPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVP 590 +PA+++ + RL L L+ AI Q ++ YQP I T ++ EAL RW P+ G + Sbjct: 418 TPALHQAARARLRLTNDLRTAIQCGQFEVYYQPIIELSTNKVVKAEALVRWRHPIRGMIS 477 Query: 591 PSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQ- 649 P+ FIPLAE+ G I +G WV +A QLA+WR +++N S + RS Sbjct: 478 PAEFIPLAEDTGLIVPLGDWVARQAITQLAQWRKIFDPHFQVAINQSPVQLRSKDFTEMT 537 Query: 650 -VSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSR 708 V + + G++G+ + +EITE +++ ++ + + + RD G+ +++DDFGTG+S L+ Sbjct: 538 WVQE-LAQHGLEGNAVIIEITEGLLLNAESRVNDNLHLFRDTGIQIAIDDFGTGYSSLAY 596 Query: 709 LVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKI 768 L + +KID+SFV+ + L AI ++ SL L VVAEGVET++Q + L +I Sbjct: 597 LRKFDIDCLKIDRSFVEDL--DGVGFELCVAIIAMAHSLGLKVVAEGVETQQQCDTLARI 654 Query: 769 HCRVIQGYFFSRPLPAEEIPGWM 791 C QG+ FSRP+PA E+ + Sbjct: 655 GCDYAQGFLFSRPVPAPELTILL 677 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 61/287 (21%), Positives = 117/287 (40%), Gaps = 10/287 (3%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 +T + ++ +F L++ +G +IN + + NPA ++GY +EE+ G + M+ P Sbjct: 1 MTGSAWNSESLFQAILDRCPVGIAVINYDGHYVTVNPAYGAIYGYTQEEMAGRSFTMVFP 60 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGS--KIWTRFALSKVSAEGKVYYLA 120 R + R + G + E + ++DG IW+ ++ + L Sbjct: 61 ESARDSVLARHRQFLDEG----GTLGGEWTVMRRDGVILTIWSE-SVPFAQHGHRADRLV 115 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 V D + +EQ + + +IV++ R I+ N AFT + GY ++ G Q Sbjct: 116 YVLDITERQKAREQMKIAAAVYESTQEAIIVINTSRSIISINPAFTRLTGYSAADVVG-Q 174 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 P + AD + + + + E + G + +I+ + D N Sbjct: 175 PSYIFRSDRHDADFYTAMWRTVDEDGVWVGEMWDRKKDGSDYLKEITINVIKDAAGTPIN 234 Query: 241 LVMTFSDITEERQIRQL--EGNILAAMCSSPPFHEMGEIICRNIESV 285 V FSDIT+ ++ L A+ + P H + + R +E Sbjct: 235 YVGVFSDITQRKKQEALIWRQANYDAVTTLPNRHHFQDKLERAVEHA 281 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 714 bits (1844), Expect = 0.0, Method: Composition-based stats. Identities = 159/484 (32%), Positives = 260/484 (53%), Gaps = 17/484 (3%) Query: 323 IRQRDGAPAGILQIKTSSG-AETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPM 381 + RDGA + + T + A DI+ ++ + ++ + D + Sbjct: 391 LCHRDGAELVVEAMATQVPHGDDQALCLMFHDIT--------DRRRFQEELLHQATHDTL 442 Query: 382 TGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRF 437 TGLPNR+ L + L+ V A + + +D+ + V D+LG+ DQ L V R Sbjct: 443 TGLPNRSLLEDRLNQAVAGARRRGQMVALLMFDLDNFKVVNDTLGHTAGDQLLRSVAARI 502 Query: 438 REKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIG 496 R ++ R+ G +FV+V + + +A+ RN+++ P + + +T S+G Sbjct: 503 RSFVRNCDTFARLGGDEFVIVLTNLTRMDDAVTVAESFRNLLAMPFFLGGREIFITASMG 562 Query: 497 ISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISN 554 IS D G + L+ A AM +I+++G N +QFF+ MN+ V RL + L+ A+ Sbjct: 563 ISLFPDDGDTMEALIKKADTAMYHIKESGRNSFQFFAEEMNQKVNARLTIETGLRRALEK 622 Query: 555 NQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAE 614 ++ L YQP++ TG + G+EAL RW+ P G + P+ FIP+AE+ G I IG WV+A Sbjct: 623 GEMLLHYQPRLEPGTGAVVGMEALVRWNSPDMGLISPADFIPIAEDSGLIVEIGDWVLAT 682 Query: 615 ACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMM 674 AC Q EW +SVN+SA F + ++V + G+ H + +E+TE+ + Sbjct: 683 ACCQALEWHRMGHDSLRVSVNISARQFVGHDFVDRVVRIIEQSGLSPHFVELELTETALT 742 Query: 675 EHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRIL 734 + E K + LR+ G+ +S+DDFGTG+S L+ L PV +KIDKSF+D + + Sbjct: 743 HNVDETVKIMNRLRERGITISIDDFGTGYSSLNYLKRFPVDVLKIDKSFIDDMVKRREDA 802 Query: 735 ALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS-S 793 A++ I I +++ VVAEGVET EQ ++L + +C IQG++FSRPLP EE +++ Sbjct: 803 AIVATIIGIAHHMHMKVVAEGVETAEQMKLLMEGNCEEIQGFYFSRPLPPEEFERYIAGR 862 Query: 794 VLPL 797 +PL Sbjct: 863 TVPL 866 Score = 63.5 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 60/146 (41%), Gaps = 9/146 (6%) Query: 116 VYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPE-RHIVQCNRAFTEMFGYCIS 174 + L R + + + V+ ++ +++L+P I+ N A + G+ + Sbjct: 298 IINLFWRRLLESLQQGRRSEERNRLVVERTNQAILLLEPGAGTIIDANPATCVLLGFSRN 357 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 E +G LL+ P + L + R+ E L R G ++ ++A + V Sbjct: 358 ELTGADIHALLSGP------VQEVDSELERCLRETRELSLCHRDGAELVVEAMATQV--P 409 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGN 260 Q L + F DIT+ R+ ++ + Sbjct: 410 HGDDQALCLMFHDITDRRRFQEELLH 435 Score = 59.3 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 50/135 (37%), Gaps = 10/135 (7%) Query: 7 DNAADGIFFPALEQNMMGAVLINEN-DEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 ++ +E+ +L+ ++ NPA L G+ R E+ G +I L+ + Sbjct: 313 GRRSEERNRLVVERTNQAILLLEPGAGTIIDANPATCVLLGFSRNELTGADIHALLSGPV 372 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDA 125 + E R RE +REL L +DG+++ ++V + D Sbjct: 373 QEVDSELERCLRE---------TRELSLCHRDGAELVVEAMATQVPHGDDQALCLMFHDI 423 Query: 126 SVEMAQKEQTRQLII 140 + +E+ Sbjct: 424 TDRRRFQEELLHQAT 438 >UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2Z8_DESAC Length = 1288 Score = 714 bits (1843), Expect = 0.0, Method: Composition-based stats. Identities = 169/575 (29%), Positives = 280/575 (48%), Gaps = 31/575 (5%) Query: 237 HLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFAL 296 LQ F + E + I++ +I + VL ++ L + Sbjct: 731 QLQLAATVFDNSREGIVLTDKNEKIVSVN------RAFSDITGYRDDEVLGQTPRILKSN 784 Query: 297 RNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGIL---QIKTSSGAETSAFIERV 351 R+G + + W I R++DG L E S +I Sbjct: 785 RHGRDFYQN---MWHCLAEHGCWQGEIWNRRKDGQVYPELMSMSAVCDDQQEVSHYIAVF 841 Query: 352 ADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVY 407 DISQ ++S++ ++ L DP+T LPNR+ +LD V A V Sbjct: 842 TDISQA--------KESQEKLDYLSWHDPLTDLPNRSLFCTHLDQAVKHAERKHHSFAVL 893 Query: 408 LIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSN 466 +DH +DV DS G+ D L ++ +R R L+ L R+ G +FVL+ + D Sbjct: 894 CFDLDHFKDVNDSFGHLVGDALLRKIADRLRSCLRESDMLARLGGDEFVLLLEDVADSHR 953 Query: 467 ITQIADELRNVVSKPIMID--DKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKN 522 +T +A+E+ + + +PI + D +++S+GI+ + G++ LL A +A+ +++ Sbjct: 954 VTMMAEEILHQLQQPICLTETDLEVQVSVSVGIAVYPEHGRDALELLQRADSALYRAKQH 1013 Query: 523 GGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWH 582 G + +++ M E +ER+ L L++A+ + + YQPQ+ TG++ G EAL RW+ Sbjct: 1014 GRARFAYYNEEMTEQAQERVQLSFHLRQALEKKEFAVYYQPQVDLGTGQIVGAEALMRWN 1073 Query: 583 DPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFR 642 P G V P RFIPLAEEIG I ++G W++ + C Q W L+VNLSA+ F Sbjct: 1074 SPELGLVTPDRFIPLAEEIGCICSMGTWILRQVCEQGKAWLDAGYPPLTLAVNLSAVQFA 1133 Query: 643 SNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTG 702 + ++ + + G L +E+TES +M + + ++ L ++GV L++DDFGTG Sbjct: 1134 EEDIACRLKETLQETGYPAEYLELEVTESTLMHKEQQTIDLLKSLNELGVRLALDDFGTG 1193 Query: 703 FSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQF 762 +S L+ L P+ +K+DKSF+D + ++ AI +G L ++AEGVET Q Sbjct: 1194 YSSLAYLKYFPLHLLKVDKSFIDDLPADANDCKMVTAIVQMGHGLGFDLLAEGVETVAQR 1253 Query: 763 EMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPL 797 + L ++ C QGY+ S P+PA E S PL Sbjct: 1254 DCLAQLGCDYYQGYYCSPPVPACEFAALRQSQKPL 1288 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 5/150 (3%) Query: 116 VYYLALVRDASVEMAQK----EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY 171 V +A D Q+ +Q + D+ +++ D IV NRAF+++ GY Sbjct: 709 VQDVAFALDVHEHEQQQAFSMKQLQLAATVFDNSREGIVLTDKNEKIVSVNRAFSDITGY 768 Query: 172 CISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV 231 E G P +L D + L + Q E + G+ S+S V Sbjct: 769 RDDEVLGQTP-RILKSNRHGRDFYQNMWHCLAEHGCWQGEIWNRRKDGQVYPELMSMSAV 827 Query: 232 YDVLAHLQNLVMTFSDITEERQIRQLEGNI 261 D + + + F+DI++ ++ ++ + Sbjct: 828 CDDQQEVSHYIAVFTDISQAKESQEKLDYL 857 Score = 71.6 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 78/223 (34%), Gaps = 42/223 (18%) Query: 18 LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNR 77 + + G VL ++N++++ N A + GY+ +EV+G +L H N Sbjct: 739 FDNSREGIVLTDKNEKIVSVNRAFSDITGYRDDEVLGQTPRILKSNR----HGRDFYQNM 794 Query: 78 EGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYYLALVRDASVEMAQKEQT 135 A E+ +KDG ++S V + +Y+A+ D S +E+ Sbjct: 795 WHCLAEHGCWQGEIWNRRKDGQVYPELMSMSAVCDDQQEVSHYIAVFTDISQAKESQEKL 854 Query: 136 RQLI-------------------IAVDHLDR-----PVIVLDPERHIVQCNRAFTEMFGY 171 L AV H +R V+ D + H N +F + G Sbjct: 855 DYLSWHDPLTDLPNRSLFCTHLDQAVKHAERKHHSFAVLCFDLD-HFKDVNDSFGHLVG- 912 Query: 172 CISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLL 214 D LL + +R +L + D+ LL Sbjct: 913 ----------DALLRKIADRLRSCLRESDMLARLGGDEFVLLL 945 >UniRef50_B5ZGV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZGV8_GLUDA Length = 877 Score = 713 bits (1842), Expect = 0.0, Method: Composition-based stats. Identities = 260/866 (30%), Positives = 416/866 (48%), Gaps = 100/866 (11%) Query: 13 IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEY 72 + L+ G V+ + + ++F N AA +L G + EE ++ +L+P Sbjct: 11 VLAGVLDAMPGGVVVTDADGRILFINRAAARLCGGQPEEWASRSLAVLLP---------- 60 Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYY-----------LAL 121 +G RE++L +DG+ +W L++ A V +A Sbjct: 61 ------DMDMTPDGTPREVRLAGRDGAALWLEVTLNRGGALPGVGLEVPEETPREIRVAA 114 Query: 122 VRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 +RD + E+A++ V+H R V+VLD IV N AFT + Y + G Sbjct: 115 LRDVTDEVARRTAAHLFSTIVNHAGRGVMVLDDRDRIVYVNPAFTRLLDYRPEDVVGRDV 174 Query: 182 DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNL 241 +L+ ++ L + +R+G+ IW+ + SPV D Sbjct: 175 SVILSPDVDDRAALGEFRRDLHGRRTFGRDLHARSRSGQDIWMSTATSPVRDGGVLDGGA 234 Query: 242 VMTFSDITEERQIRQLEGNILAAMC-----SSPPFHEMGEIICRNIESVLNESHVSLFAL 296 ++ SD T +++ L ++ +A+ + F ++ +IC IE++ S+ L Sbjct: 235 IVILSDETPATELQHLRLDVTSALAGVTGSRAMDFDDVMTLICARIEAIAPGVMASIILL 294 Query: 297 R---------------------NGMPIHWASSSHGAEIQNAQ------------------ 317 +G P+ + + GA I + Q Sbjct: 295 SGDGTAWMAGRAAMPDAIAAACDGFPVGPMAGTCGAAISSGQEVLTSDIETDPNWTPAMR 354 Query: 318 ----------SWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEK 367 WS IR R G AG L + + E S + RV D + LA+EQE+ Sbjct: 355 DLMRPLGVVACWSVPIRLRGGTVAGSLALYFQTLREPSPWHRRVVDACIQLCTLAVEQER 414 Query: 368 SRQHIEQLIQFDPMTGLPNRNNLHNYL--DDLVDKAVSPVVYLIGVDHIQDVIDSLGYAW 425 +R I L +D +TGLPNR L +L + + V+ +++ D+LG A Sbjct: 415 ARAQIAHLAHYDAVTGLPNRTWLREHLAARQGAANWCGLTLMSVDVNRYREIRDALGGAA 474 Query: 426 ADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEND---------------VSNITQI 470 AD+ L + R R + D L R +F +++ V + + Sbjct: 475 ADEVLGGIAKRLRAVVGQDDILVRTGEDEFSILTDCGHDGTEPECRDRSGMMAVDRASTL 534 Query: 471 ADELRNVVSKPIMIDDKPFPLTLSIGIS--YDLGKNRDYLLSTAHNAMDYIRKNGGNGWQ 528 A + ++ P++++ P +SIGI D G+ + LL A+ R+ GG+ ++ Sbjct: 535 AGAILRALASPVVVNGMPIGSPISIGICAGRDKGRTVETLLRHTQIAVSRAREAGGSLYR 594 Query: 529 FFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGH 588 FFSP MN ++R++L +AL +A+++ +L+LVYQPQ+ + +G LYG+EALARWHDP G Sbjct: 595 FFSPEMNRWAQDRVMLASALGDALADGRLRLVYQPQVRSRSGALYGVEALARWHDPEWGD 654 Query: 589 VPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPN 648 +PP+RFIP+AEE G IE +G W + +ACRQ+A W + + IP +SVNLSA HF LP Sbjct: 655 IPPTRFIPMAEEAGLIEALGEWALRQACRQMAIWMAHGVGIPVVSVNLSARHFSDPGLPG 714 Query: 649 QVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSR 708 + + GI +L VEITES M+ + +R +GVGLS+DDFGTGFS L+ Sbjct: 715 LIGSILEESGIPPGRLMVEITESTMITDSETTIAAARAIRALGVGLSMDDFGTGFSSLAN 774 Query: 709 LVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKI 768 LVSLP++E+KID++FV +++ A+ IGQSL +TVVAEGVET+ Q ++L + Sbjct: 775 LVSLPLSEVKIDRAFVVGLERAGDTYSIVNAVLRIGQSLGVTVVAEGVETQRQLDLLDGL 834 Query: 769 HCRVIQGYFFSRPLPAEEIPGWMSSV 794 C V+QG+ SRPL A ++P W+ Sbjct: 835 DCPVVQGFLMSRPLDAGKVPSWLEEW 860 Score = 76.6 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 55/130 (42%), Gaps = 5/130 (3%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A A +F + G +++++ D +++ NPA +L Y+ E+V+G ++ +++ D+ Sbjct: 123 ARRTAAHLFSTIVNHAGRGVMVLDDRDRIVYVNPAFTRLLDYRPEDVVGRDVSVILSPDV 182 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLALVR 123 + R R R+L + G IW A S V G + + ++ Sbjct: 183 DDRAA--LGEFRRDLHGR-RTFGRDLHARSRSGQDIWMSTATSPVRDGGVLDGGAIVILS 239 Query: 124 DASVEMAQKE 133 D + + Sbjct: 240 DETPATELQH 249 >UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SC6_GEOMG Length = 821 Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats. Identities = 163/481 (33%), Positives = 261/481 (54%), Gaps = 21/481 (4%) Query: 327 DGAPAGI----LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMT 382 DG P+G+ + G + FI+ V DI+ +++++ + I +L +D +T Sbjct: 342 DGEPSGLRLSAFPVFNEQGK-ATKFIKVVEDIT--------DRKRAEEKIRRLAYYDSLT 392 Query: 383 GLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFR 438 GLPNR + + L + A + + +D +DV DS G+ D+ L EV R Sbjct: 393 GLPNRPLMMDRLSQAIRHARRHGEVVALLFLDLDRFKDVNDSQGHRVGDRLLQEVAARLS 452 Query: 439 EKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGI 497 + L R+ G +FV+++ ++ + +AD++ +++P +D + + SIGI Sbjct: 453 GCTRESDTLARLGGDEFVIIAPGVRAATDASLLADKILAALAEPFTLDRQTLHIATSIGI 512 Query: 498 SYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNN 555 G N + LL A AM + GGN ++FFS MN ER L +++A++N Sbjct: 513 VLFPSDGGNGEMLLQRADMAMYAAKDRGGNSYRFFSAEMNTRAVERHELEEDMRQALTNG 572 Query: 556 QLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEA 615 + L+YQPQ+ T ++ G+EAL RW+ P G + PSRFIP+AEE G I +GRWV+ EA Sbjct: 573 EFFLMYQPQVNTGTWKVVGVEALVRWNHPRKGVILPSRFIPVAEETGFISKLGRWVLEEA 632 Query: 616 CRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMME 675 CRQ A+W+ + + VNL A F ++ VSD + G+ L +E+TE+M+M Sbjct: 633 CRQGAQWQHDGLPPLQMGVNLCARQFTHEEIVGTVSDVLQKTGLPSELLEIELTETMLM- 691 Query: 676 HDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILA 735 + L+ +GV L++DDFGTG+S + L P+ IKID+SF+ + A Sbjct: 692 DSETAVSTLGQLKALGVRLAIDDFGTGYSSFNYLKHFPLDRIKIDQSFIRDIGQSRGNGA 751 Query: 736 LLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 ++EAI ++ +SL V+AEGVET+EQ L I C IQG++FSRPL +++ + L Sbjct: 752 IIEAIVAVARSLGPEVLAEGVETEEQLRYLMSITCADIQGFYFSRPLLPDDVSRLIRESL 811 Query: 796 P 796 P Sbjct: 812 P 812 Score = 65.8 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 57/154 (37%), Gaps = 8/154 (5%) Query: 115 KVYYLALVRDASVEMAQK-------EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTE 167 +Y L V E ++ E ++ V++++ + ++D IV N + Sbjct: 233 GIYVLGYVYIREQESRRRRATAKVVESEKRYRTLVENVNMGISLIDGNNRIVMNNGYLEK 292 Query: 168 MFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKAS 227 MF + +G + DN + ++ + A + E + GE ++ S Sbjct: 293 MFRKNAEKLTGRFCYQEFENRDECCDNCLGVEAMTTGRAVSR-EVERILDDGEPSGLRLS 351 Query: 228 ISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNI 261 PV++ + DIT+ ++ + + Sbjct: 352 AFPVFNEQGKATKFIKVVEDITDRKRAEEKIRRL 385 Score = 45.8 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 6/133 (4%) Query: 9 AADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPA 68 ++ + +E MG LI+ N+ ++ N EK++ E++ G Sbjct: 258 ESEKRYRTLVENVNMGISLIDGNNRIVMNNGYLEKMFRKNAEKLTGRFCYQEFENRDECC 317 Query: 69 HPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRDAS 126 G+A +SRE++ DG R + V E ++ +V D + Sbjct: 318 DNCLGVEAMTTGRA----VSREVERILDDGEPSGLRLSAFPVFNEQGKATKFIKVVEDIT 373 Query: 127 VEMAQKEQTRQLI 139 +E+ R+L Sbjct: 374 DRKRAEEKIRRLA 386 >UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUG6_METML Length = 836 Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats. Identities = 192/764 (25%), Positives = 332/764 (43%), Gaps = 48/764 (6%) Query: 57 IDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWT-RFALSKVSAEGK 115 +++ P A+ + A L L+ + AL++ AE + Sbjct: 83 VNIWYPSYWASAYAKAFTGVVSFATAVAVWWIMPLALKAPSAQSLQVLNQALARSHAELE 142 Query: 116 VYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 + + + + Q+ +L A+DH+ V + D V NR + F + + Sbjct: 143 TR---VQQRTAELTSALNQSHRLSEALDHIPAFVYIKDINGKYVYANRMTLDFFKCSVDD 199 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL 235 + + + + ++ + +E ++ +K +P+Y+ Sbjct: 200 LVQIDEGKYFSARTLEKSRSVD-KSVIERGEDACEEIEAVSDDDKKRTFLQIKTPIYENE 258 Query: 236 AHLQ--NLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIE---SVLNESH 290 A + L +DIT + I A S + + C ++ + + Sbjct: 259 ADRKIWGLCGISTDITALKNAETSL-RIAATAFESSDGILITDAGCSILQVNSAFTTITG 317 Query: 291 VSLFALRNGMPIHWASSSH--------GAEIQNAQSWSATI--RQRDGAPAG----ILQI 336 S + P +S H + +W I R+++G I ++ Sbjct: 318 YSAEDVVGKNPRILSSGRHDQLFYQALWDRVNTTGTWCGEIWNRRKNGDIYPERITISEV 377 Query: 337 KTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDD 396 K G + ++ DIS E + S + IE L +DP+T LPNR L + + Sbjct: 378 KDKDGK-VTNYVSVFTDIS--------ESKASSEQIEHLAFYDPLTNLPNRLLLLDRVRQ 428 Query: 397 LVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEG 452 + + + +DH + + D+LG++ D L R ++ + R G Sbjct: 429 AFSSSSRTGKKGALLFVDLDHFKVLNDTLGHSTGDLLLKLQAERLSHCVRAGDTVARFGG 488 Query: 453 TQFVLVSLEND--VSNITQIAD----ELRNVVSKPIMIDDKPFPLTLSIGISYDLGKN-- 504 +FV+V + D + IA+ ++ + + +P + T SIGI+ G Sbjct: 489 DEFVVVLEDLDRNATEAAAIAEQIGNKILSTLHEPCQFGTHQYQSTSSIGITLFSGDEHE 548 Query: 505 RDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQ 564 + LL A +M +K G N +FF PAM E + R L + L+ AI QL L YQ Q Sbjct: 549 IEDLLKQADISMYQAKKAGRNTLRFFDPAMQEKLSVRASLESELRYAIEKQQLALYYQVQ 608 Query: 565 IFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRS 624 + + + G EAL RW P G V P FIP+AEE I ++G WVI AC QLAEW Sbjct: 609 VD-DNQRMVGAEALIRWIHPERGTVSPIEFIPIAEESALILDVGHWVINTACMQLAEWAK 667 Query: 625 Q-NIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKR 683 ++VN+SA FR+ A+ ID +L +E+TES+++E ++ + Sbjct: 668 SVEKKHLMIAVNVSAHQFRALDFVQSTQQAIDLHKIDASRLKLELTESVILEDVDDVIAK 727 Query: 684 IQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSI 743 + L+ +GV LS+DDFGTG+S LS L LP+ ++KID+SFV + +++ I + Sbjct: 728 MHALKALGVKLSLDDFGTGYSSLSYLKKLPLDQVKIDQSFVRDLAYDPNDAIMVKTIIDL 787 Query: 744 GQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 + + V+AEGVET+ + ++L+ CR+ QGY F RP+P E++ Sbjct: 788 ANNFRINVIAEGVETELELDILKGYGCRLYQGYLFGRPVPIEQL 831 Score = 72.8 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 54/146 (36%), Gaps = 8/146 (5%) Query: 16 PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRH 75 ++ G ++ + ++ N A + GY E+V+G N +L H + Sbjct: 287 ATAFESSDGILITDAGCSILQVNSAFTTITGYSAEDVVGKNPRILSSGR----HDQLFYQ 342 Query: 76 NREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVY--YLALVRDASVEMAQKE 133 E+ +K+G R +S+V + Y+++ D S A E Sbjct: 343 ALWDRVNTTGTWCGEIWNRRKNGDIYPERITISEVKDKDGKVTNYVSVFTDISESKASSE 402 Query: 134 QTRQLIIA--VDHLDRPVIVLDPERH 157 Q L + +L +++LD R Sbjct: 403 QIEHLAFYDPLTNLPNRLLLLDRVRQ 428 >UniRef50_Q1JW15 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JW15_DESAC Length = 893 Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats. Identities = 214/814 (26%), Positives = 358/814 (43%), Gaps = 53/814 (6%) Query: 10 ADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAH 69 A +++N+ ++ NP A K + E+ +G +++ IP D Sbjct: 94 ARDELEAIFNATGAAIIVLNDELQLHSCNPMAVKRFSIDAEKALGCHLEQAIP-DCHSLL 152 Query: 70 PEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEM 129 + + + + S + S + +Y + D + Sbjct: 153 SQNFLNELANCRQGRLVIEIAFHD-----SWYSLVATPVRNSNDQVSFYALIFSDITERK 207 Query: 130 AQKE----QTRQLIIAVDHLDRPVIVLDPE-RHIVQCNRAFTEMFGYCISEASGMQPDTL 184 +E +L ++ + ++++DP+ IV N ++M G + G Sbjct: 208 RTEESLVEAETRLTEILNTMMAGILIIDPQTHRIVDVNHMASQMIGDPPDKIIGAICHRY 267 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 + L Q++ D + +L+ GE+I I + + + L ++ + Sbjct: 268 ICPSSSGQCPLTDLNQVI-----DNSDRVLINNRGEEIPILKTATII--ELNGKAFILES 320 Query: 245 FSDITEERQIRQLEGN-----------ILAAMCSSPPFHEMGEIICRNIESVLNESHVSL 293 F DI + Q + + ++ + C I +N + + Sbjct: 321 FIDIQARKLAEQALRESEQRYRSLYTAMREGVAIGELVYDAHGVACDYILHDVNRAFSEM 380 Query: 294 FALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKT--------SSGAETS 345 + + + +S + + L + S E Sbjct: 381 LGVASEELVGHRASEFYHGAPPYIHILDEVVKYGIPKEYELPLSDLEKVFHVSVSRPEKE 440 Query: 346 AFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS-- 403 F + D++ + +K++Q IE+L +D +TGLPNR + + L V +A Sbjct: 441 RFACIINDVT--------DSKKAQQEIERLAYYDTLTGLPNRVLIKDRLQQAVAQAQRSR 492 Query: 404 --PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL- 460 V + +DH + + DSLG DQ L V R + L+ + R+ G +FV++ Sbjct: 493 ALVGVLALDLDHFKKINDSLGIGCGDQMLKLVSQRLKGHLRQGDSVARMGGDEFVILITG 552 Query: 461 ENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDY 518 ++I A ++ +++++P+ ID T S+GIS D LL A AM Sbjct: 553 IKSQNDIVTAAGKILDLLAEPVTIDGHDLVSTGSLGISVYPTDADEVDLLLKHADTAMYQ 612 Query: 519 IRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEAL 578 ++ G N +QF+SP MNE ERL L + L A++ N+L+L +QPQI G + G EAL Sbjct: 613 AKETGRNLYQFYSPDMNERAFERLFLDSDLHRALARNELELYFQPQIDLAQGHVVGAEAL 672 Query: 579 ARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSA 638 RW+ G + P FIPLAEE I +IG WVI EACR +W Q ++VNLSA Sbjct: 673 LRWNHATKGQISPVVFIPLAEESDLILDIGGWVIEEACRHARQWHDQGYTDLRVAVNLSA 732 Query: 639 LHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDD 698 FRS LP+ V+ +H G+ H L +E+TES++ME + LR +G LS+DD Sbjct: 733 RQFRS-DLPDIVARVLHETGLPAHLLELELTESLLMERPELARTILNKLRYLGNHLSIDD 791 Query: 699 FGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVET 758 FGTG+S LS L P+ +KID+SFV + ++EAI ++ L L VVAEGVET Sbjct: 792 FGTGYSSLSYLKHFPIDRLKIDRSFVKDLNVDPDDAIIVEAIIALAHGLRLNVVAEGVET 851 Query: 759 KEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 +QFE +R+ C IQGY +RP+PA++ ++ Sbjct: 852 SDQFEFMRQRGCDEIQGYVVARPMPADDFLRYLQ 885 >UniRef50_Q2Y8B4 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y8B4_NITMU Length = 1109 Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats. Identities = 189/712 (26%), Positives = 316/712 (44%), Gaps = 36/712 (5%) Query: 107 LSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPER-HIVQCNRAF 165 L + + + LAL+ + +Q R L D + + P+ ++ N F Sbjct: 398 LLLWRQQQRAHQLALI------IHTADQDRLLKYFYDLPFIGMAITSPDTKRWLRFNNQF 451 Query: 166 TEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIK 225 EM GY E + + + + R + L ++ + + G I+ Sbjct: 452 CEMMGYSTEELAKKSWIEITHPDDVAKSTAERERILKGESEGYAMNKRFIRKDGSIIFAN 511 Query: 226 ASISPVYDVLAHLQNLVMTFSDITE-----------ERQIRQLEGNILAAMCS---SPPF 271 + V + V DITE RQ++ I + Sbjct: 512 VDVKCVRRDDGTVHYFVAMIRDITEQERRKTEILAARRQLQATLDAIPDLLFELDADGCV 571 Query: 272 HEMGEIICRNIESVLNES----HVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRD 327 H + +V ES V+ F + I ++ + E + +R Sbjct: 572 HAWHSVRRTEFPTVSGESLVGKKVADFLPTGAVDIILSALAEAQEKGLSSGKQLELRLPG 631 Query: 328 GAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNR 387 ++ S SA R +++ + E++ S Q I L +D +TGLPNR Sbjct: 632 REDKWWFELSVSRKHVDSAAGLRFIVLARDI----TERKASEQRILHLAHYDSLTGLPNR 687 Query: 388 NNLHNYLDDLV----DKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKP 443 L + + + +A V + +D + + DSLG+ D L V R + ++ Sbjct: 688 ALLADRMRVAINRAARQAKRLAVLFVDLDRFKAINDSLGHDVGDHLLKVVAERMQTSIRS 747 Query: 444 DQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--D 500 + R+ G +FV++ E + ++A ++ + +S+P I+ LT SIGI D Sbjct: 748 VDTVSRVGGDEFVVLLNEIETAEDAARVAQKIIDGLSQPYQIEKHELLLTGSIGICIYPD 807 Query: 501 LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLV 560 GK + LL A +M ++ G N +QF+S M ERL L L+ A+ ++ LV Sbjct: 808 NGKEPNILLRNADASMYTAKEAGHNRYQFYSEDMTARAIERLSLEHDLRGAVERGEMFLV 867 Query: 561 YQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLA 620 YQPQI T + G+E L RW P G + P RFIP+AE+ G I +IG W + E+CRQ Sbjct: 868 YQPQIELGTSRVIGVEVLMRWRHPARGLISPVRFIPVAEDTGLILSIGEWGLRESCRQAQ 927 Query: 621 EWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEI 680 W + + +SVN+SA+ FR + +A+ G+ L +E+TES +M+ Sbjct: 928 LWYERGLLNACISVNVSAVQFRQTDFVGIIENALQESGLAPTNLELELTESAVMQGAEPA 987 Query: 681 FKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAI 740 +++ L +GV +++DDFGTG+S L+ L V +KID+SFV A+ AI Sbjct: 988 LNKLRELDALGVKVAIDDFGTGYSSLAYLRQFTVDRLKIDQSFVRDVPGNNDAEAIAAAI 1047 Query: 741 TSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 ++G +L ++AEGVET+ Q E L+ + C+ QGY F+ P+ A E W++ Sbjct: 1048 VAMGLNLGFRIIAEGVETEAQAEFLQSVLCKEGQGYLFAWPMTAIEFEAWIA 1099 Score = 80.1 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 45/263 (17%), Positives = 86/263 (32%), Gaps = 12/263 (4%) Query: 8 NAADGIFFPALEQNMMGAVLIN--ENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A + I + + FN ++ GY EE+ + + D Sbjct: 416 TADQDRLLKYFYDLPFIGMAITSPDTKRWLRFNNQFCEMMGYSTEELAKKSWIEITHPDD 475 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLALVR 123 + K EG + + +KDGS I+ + V + Y++A++R Sbjct: 476 V---AKSTAERERILKGESEGYAMNKRFIRKDGSIIFANVDVKCVRRDDGTVHYFVAMIR 532 Query: 124 DASVEMAQKE----QTRQLIIAVDHLDRPVIVLDPERHIVQC-NRAFTEMFGYCISEASG 178 D + + +K RQL +D + + LD + + + TE G Sbjct: 533 DITEQERRKTEILAARRQLQATLDAIPDLLFELDADGCVHAWHSVRRTEFPTVSGESLVG 592 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 + L + + + L L +K W + S+S + A Sbjct: 593 KKVADFLPTGAVDIILSALAEAQEKGLSSGKQLELRLPGREDKWWFELSVSRKHVDSAAG 652 Query: 239 QNLVMTFSDITEERQIRQLEGNI 261 ++ DITE + Q ++ Sbjct: 653 LRFIVLARDITERKASEQRILHL 675 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 992 0.0 UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 947 0.0 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 937 0.0 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 930 0.0 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 924 0.0 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 920 0.0 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 919 0.0 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 919 0.0 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 910 0.0 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 910 0.0 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 900 0.0 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 897 0.0 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 895 0.0 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 895 0.0 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 893 0.0 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 892 0.0 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 891 0.0 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 884 0.0 UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/P... 883 0.0 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 881 0.0 UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 880 0.0 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 880 0.0 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 879 0.0 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 878 0.0 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 876 0.0 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 875 0.0 UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 871 0.0 UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4... 867 0.0 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 866 0.0 UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/P... 866 0.0 UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 ... 865 0.0 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 862 0.0 UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 858 0.0 UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuni... 857 0.0 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 857 0.0 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 855 0.0 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 853 0.0 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 853 0.0 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 852 0.0 UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria... 851 0.0 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 851 0.0 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 851 0.0 UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 851 0.0 UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/P... 850 0.0 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 849 0.0 UniRef50_A1SU67 Diguanylate cyclase/phosphodiesterase with PAS/P... 849 0.0 UniRef50_P76129 Heme-regulated cyclic di-GMP, cyclic AMP phospho... 846 0.0 UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 844 0.0 UniRef50_B2JAQ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 843 0.0 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 843 0.0 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 842 0.0 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 841 0.0 UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 841 0.0 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 840 0.0 UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 840 0.0 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 840 0.0 UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/P... 840 0.0 UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 840 0.0 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 838 0.0 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 837 0.0 UniRef50_C1DD31 Predicted signal transduction protein containing... 837 0.0 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 836 0.0 UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 836 0.0 UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/P... 835 0.0 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 835 0.0 UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n... 834 0.0 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 834 0.0 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 833 0.0 UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/P... 831 0.0 UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 831 0.0 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 830 0.0 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 830 0.0 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 829 0.0 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 829 0.0 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 829 0.0 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 827 0.0 UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/P... 827 0.0 UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/P... 826 0.0 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 825 0.0 UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 824 0.0 UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 824 0.0 UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio... 824 0.0 UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS... 823 0.0 UniRef50_Q47HF3 Response regulator receiver modulated diguanylat... 822 0.0 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 821 0.0 UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/P... 820 0.0 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 820 0.0 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 819 0.0 UniRef50_C5SCB7 Diguanylate cyclase/phosphodiesterase with PAS/P... 819 0.0 UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 818 0.0 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 818 0.0 UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 817 0.0 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 817 0.0 UniRef50_Q4C8S6 PAS:GGDEF n=1 Tax=Crocosphaera watsonii WH 8501 ... 816 0.0 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 816 0.0 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 815 0.0 UniRef50_Q31NI4 Response regulator receiver modulated diguanylat... 814 0.0 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 814 0.0 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 814 0.0 UniRef50_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/P... 813 0.0 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 813 0.0 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 811 0.0 UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsul... 811 0.0 UniRef50_A9BW89 Diguanylate cyclase/phosphodiesterase with PAS/P... 811 0.0 UniRef50_B4B330 Diguanylate cyclase/phosphodiesterase with PAS/P... 811 0.0 UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/P... 810 0.0 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 809 0.0 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 809 0.0 UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candida... 809 0.0 UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermane... 809 0.0 UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 808 0.0 UniRef50_Q55576 Slr0359 protein n=2 Tax=Cyanobacteria RepID=Q555... 808 0.0 UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/P... 808 0.0 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 807 0.0 UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 807 0.0 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 806 0.0 UniRef50_C7RN47 Diguanylate cyclase/phosphodiesterase with PAS/P... 806 0.0 UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellula... 806 0.0 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 806 0.0 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 804 0.0 UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 804 0.0 UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/P... 804 0.0 UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax... 804 0.0 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 803 0.0 UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/P... 803 0.0 UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/P... 803 0.0 UniRef50_A4BQ25 Putative diguanylate cyclase/phosphodiesterase (... 803 0.0 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 803 0.0 UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 T... 803 0.0 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 802 0.0 UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 801 0.0 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 801 0.0 UniRef50_C1DB08 Predicted signal transduction protein containing... 800 0.0 UniRef50_B0TF94 Predicted signal transduction domain protein n=1... 800 0.0 UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 799 0.0 UniRef50_B1Y6A9 Diguanylate cyclase/phosphodiesterase with PAS/P... 799 0.0 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 798 0.0 UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/P... 798 0.0 UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnet... 798 0.0 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 797 0.0 UniRef50_A6UJR0 Diguanylate cyclase/phosphodiesterase with PAS/P... 796 0.0 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 796 0.0 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 796 0.0 UniRef50_B6BGA2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 794 0.0 UniRef50_Q21WZ6 Response regulator receiver modulated diguanylat... 794 0.0 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 793 0.0 UniRef50_Q118H0 Diguanylate cyclase/phosphodiesterase with PAS/P... 793 0.0 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 793 0.0 UniRef50_C6BWZ0 Diguanylate cyclase/phosphodiesterase with PAS/P... 793 0.0 UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 793 0.0 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 792 0.0 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 791 0.0 UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 791 0.0 UniRef50_Q2BPB1 Regulatory component of sensory transduction sys... 790 0.0 UniRef50_Q13IZ7 Putative diguanylate cyclase(GGDEF)/ phosphodies... 790 0.0 UniRef50_B8G9I9 Diguanylate cyclase/phosphodiesterase with PAS/P... 789 0.0 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 789 0.0 UniRef50_B8GLY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 789 0.0 UniRef50_Q12L20 Diguanylate cyclase/phosphodiesterase with PAS/P... 789 0.0 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 788 0.0 UniRef50_Q88LF0 Sensory box protein n=16 Tax=Proteobacteria RepI... 788 0.0 UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/P... 788 0.0 UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/P... 788 0.0 UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 T... 787 0.0 UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/P... 787 0.0 UniRef50_Q2RRN9 Sensor protein n=3 Tax=Proteobacteria RepID=Q2RR... 787 0.0 UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/P... 786 0.0 UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/P... 786 0.0 UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 784 0.0 UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/P... 784 0.0 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 784 0.0 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 784 0.0 UniRef50_Q5ZZI1 Sensory box (GGDEF/EAL domain) regulatory protei... 783 0.0 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 783 0.0 UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplast... 783 0.0 UniRef50_A8FY98 Signal transduction protein containing a membran... 783 0.0 UniRef50_C7RQ11 Response regulator receiver modulated diguanylat... 783 0.0 UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magneto... 782 0.0 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 782 0.0 UniRef50_Q1GXN7 Diguanylate cyclase/phosphodiesterase n=3 Tax=Pr... 782 0.0 UniRef50_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodie... 782 0.0 UniRef50_C6CKZ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 781 0.0 UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/P... 781 0.0 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 781 0.0 UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacter... 780 0.0 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 780 0.0 UniRef50_A4ACX6 Sensory box/GGDEF/EAL family protein n=1 Tax=Con... 780 0.0 UniRef50_A0YYE8 Putative uncharacterized protein n=1 Tax=Lyngbya... 779 0.0 UniRef50_B8DSE5 Diguanylate cyclase/phosphodiesterase with PAS/P... 778 0.0 UniRef50_C1DCZ4 Predicted signal transduction protein containing... 778 0.0 UniRef50_C6NZF1 Diguanylate cyclase/phosphodiesterase with PAS/P... 778 0.0 UniRef50_Q1ASD1 Diguanylate cyclase/phosphodiesterase with PAS/P... 777 0.0 UniRef50_Q3A017 Diguanylate cyclase/phosphodiesterase with PAS/P... 777 0.0 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 776 0.0 UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Co... 776 0.0 UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/P... 776 0.0 UniRef50_C0N514 Putative uncharacterized protein n=1 Tax=Methylo... 774 0.0 UniRef50_B7KJT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 774 0.0 UniRef50_C6DZH0 Diguanylate cyclase/phosphodiesterase with PAS/P... 774 0.0 UniRef50_Q2W5V0 Predicted signal transduction protein containing... 774 0.0 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 774 0.0 UniRef50_Q21UE9 Diguanylate cyclase/phosphodiesterase with PAS/P... 774 0.0 UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 ... 774 0.0 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 773 0.0 UniRef50_A8FYM5 Signal transduction protein containing a membran... 773 0.0 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 773 0.0 UniRef50_Q3SIU2 Putative diguanylate cyclase/phosphodiesterase (... 773 0.0 UniRef50_Q2BPN3 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 772 0.0 UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/P... 771 0.0 UniRef50_A0YYE1 Putative diguanylate cyclase/phosphodiesterase (... 771 0.0 UniRef50_B6IWY2 Diguanylate cyclase, putative n=1 Tax=Rhodospiri... 770 0.0 UniRef50_A6QA23 Putative uncharacterized protein n=1 Tax=Sulfuro... 770 0.0 UniRef50_Q47FF8 Diguanylate cyclase/phosphodiesterase with PAS/P... 770 0.0 UniRef50_Q2BB47 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 770 0.0 UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 769 0.0 UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/P... 769 0.0 UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/P... 768 0.0 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 768 0.0 UniRef50_C6E953 Response regulator receiver modulated diguanylat... 768 0.0 UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/P... 768 0.0 UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/P... 767 0.0 UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/P... 767 0.0 UniRef50_A1S8A3 Diguanylate cyclase/phosphodiesterase with PAS/P... 767 0.0 UniRef50_P72843 Regulatory components of sensory transduction sy... 767 0.0 UniRef50_A8VRH4 Putative uncharacterized protein n=1 Tax=Bacillu... 766 0.0 UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 766 0.0 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 766 0.0 UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 766 0.0 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 766 0.0 UniRef50_C6CDP3 Diguanylate cyclase/phosphodiesterase with PAS/P... 765 0.0 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 765 0.0 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 764 0.0 UniRef50_Q607V4 Sensory box protein/GGDEF domain protein n=1 Tax... 764 0.0 UniRef50_C8QI00 Diguanylate cyclase/phosphodiesterase with PAS/P... 764 0.0 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 763 0.0 UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/P... 763 0.0 UniRef50_B8HNE5 Diguanylate cyclase/phosphodiesterase with PAS/P... 763 0.0 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 762 0.0 UniRef50_C5T198 Diguanylate cyclase/phosphodiesterase with PAS/P... 762 0.0 UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/P... 762 0.0 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 762 0.0 UniRef50_Q60A84 Sensory box protein n=1 Tax=Methylococcus capsul... 761 0.0 UniRef50_Q0AAW8 Diguanylate cyclase/phosphodiesterase with PAS/P... 761 0.0 UniRef50_B6BNY2 Ggdef domain protein n=2 Tax=Campylobacterales b... 761 0.0 UniRef50_B7K9S9 Diguanylate cyclase/phosphodiesterase with PAS/P... 760 0.0 UniRef50_Q1JW15 Diguanylate cyclase/phosphodiesterase with PAS/P... 760 0.0 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 760 0.0 UniRef50_A0LD38 Diguanylate cyclase/phosphodiesterase with PAS/P... 759 0.0 UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 759 0.0 UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=... 759 0.0 Sequences not found previously or not previously below threshold: >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 992 bits (2565), Expect = 0.0, Method: Composition-based stats. Identities = 209/814 (25%), Positives = 369/814 (45%), Gaps = 42/814 (5%) Query: 17 ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHN 76 L+ G + + ++ NPAAE+L+GY+ E G ++ ++ + Sbjct: 89 LLDHIADGIISFDGAGRLLSLNPAAEQLFGYQSAEATGRSLGDILAIRSTGKDNPLLTPL 148 Query: 77 REGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMA----QK 132 G+ ++ E + + DGS+ +LS+V +G ++L +VRD + + Sbjct: 149 VCCGEEHSR-LTCEAEGIRSDGSRFPAALSLSRVQMKGVWHFLGIVRDVTESRETGERLR 207 Query: 133 EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPA 192 E +L + + ++ +D + NRA E+FG+ E G + E A Sbjct: 208 ETNEKLDTLIQASPQGIVAVDCGGKVTLWNRAAVEIFGWSAEEVLGKPYP--VAPAERAA 265 Query: 193 DNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER 252 ++R + +L E + G I + S +P+ D ++ SDI+ + Sbjct: 266 EHRKLRELVLQGKRITDVELRRRRKDGSPIDVSLSAAPICDGSGTPLGVITIISDISARK 325 Query: 253 QIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESHVSLFALRNGMPIHWAS 306 + Q + AM SS + + I + + + + + P Sbjct: 326 RNEQELVLLKRAMESSINGITITDATHPDNPIIYVNPAFERITGYGVDEVIDKNPRFLRG 385 Query: 307 SSHGAEI----------QNAQSWSATIRQRDGAPAG---ILQIKTSSGAETSAFIERVAD 353 + + ++DG+P + + +I + D Sbjct: 386 DDRDQAELKKLVQAFKEEREGCFVLRNYRKDGSPFWNELFIAPVRDRDGVVTNYIGVMND 445 Query: 354 ISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD-----KAVSPVVYL 408 I+ E + + + DP+TGLPNRN L + L + + V Sbjct: 446 IT--------EHRRYEEQLVYQATHDPLTGLPNRNLLQDRLGQALALEAFRRRNPICVMF 497 Query: 409 IGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNI 467 + +D+ + V D+LG+ D L V NR + L+ + R+ G ++++V +V ++ Sbjct: 498 LDLDNFKKVNDTLGHTVGDMLLKAVANRLKNCLRGGDTVARLGGDEYIIVLPNVREVPDV 557 Query: 468 TQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGN 525 +A ++ NV + P+++ +T SIGI+ G+ D LL A AM + ++ G N Sbjct: 558 ITVAKKMINVFAAPLLLMGNEIYVTASIGIALFPTDGETVDALLKNADAAMYHAKEQGKN 617 Query: 526 GWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPL 585 +QF+S MN V ERL L +L A+ N + L YQP++ G + G+EAL RW+ P Sbjct: 618 NYQFYSAEMNIRVFERLSLETSLHRAVKNQEFLLHYQPRVDLRNGRICGVEALVRWNHPE 677 Query: 586 HGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQ 645 G V P++FIPLAEE G I +G WV+ AC Q W+ + ++VNLSA FR Sbjct: 678 MGLVSPAKFIPLAEETGLIVPMGEWVLRTACAQNKAWQDAGLPPLRMAVNLSARQFRQEN 737 Query: 646 LPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSG 705 L V + + G+ L +E+TES++M+ + ++ L D G+ +++DDFGTG+S Sbjct: 738 LIAMVEEILMETGLAPQWLELELTESLVMQEAEKSAAILRELTDRGIEVAIDDFGTGYSS 797 Query: 706 LSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEML 765 LS L P+ +KID++F+ + L++ I ++ L + +AEGVE EQ + L Sbjct: 798 LSYLKRFPIANLKIDQAFIRDMTRDPDDATLVKTIITMAHGLGMKTIAEGVELAEQIDFL 857 Query: 766 RKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI 799 + C +QGY+FSRP+ AEE+ ++ L + Sbjct: 858 CRHQCEEMQGYYFSRPITAEELGRLLADGKTLDL 891 Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 100/259 (38%), Gaps = 11/259 (4%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 + + ++ + G V ++ +V +N AA +++G+ EEV+G + P + Sbjct: 204 ERLRETNEKLDTLIQASPQGIVAVDCGGKVTLWNRAAVEIFGWSAEEVLGKPYP-VAPAE 262 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALV 122 H + +G + EL+ +KDGS I + + + + + ++ Sbjct: 263 RAAEHRKLRELVLQGKRI----TDVELRRRRKDGSPIDVSLSAAPICDGSGTPLGVITII 318 Query: 123 RDASVEMAQKEQTRQLIIAVDHLDRPVIVLD---PERHIVQCNRAFTEMFGYCISEASGM 179 D S +++ L A++ + + D P+ I+ N AF + GY + E Sbjct: 319 SDISARKRNEQELVLLKRAMESSINGITITDATHPDNPIIYVNPAFERITGYGVDEVIDK 378 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 P L + +L Q + + G W + I+PV D + Sbjct: 379 NP-RFLRGDDRDQAELKKLVQAFKEEREGCFVLRNYRKDGSPFWNELFIAPVRDRDGVVT 437 Query: 240 NLVMTFSDITEERQIRQLE 258 N + +DITE R+ + Sbjct: 438 NYIGVMNDITEHRRYEEQL 456 Score = 106 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 100/313 (31%), Gaps = 36/313 (11%) Query: 84 VEGMSRELQLEKKDGSK---IWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLII 140 +E L DG I AL V + +L++VR + + Sbjct: 31 IELFLMVLLPRTADGGTPLAISLLDALLLVILSAPIIWLSIVRPL--RSVAFTASLHTDL 88 Query: 141 AVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPAD--NRIRL 198 +DH+ +I D ++ N A ++FGY +EA+G +L I D L Sbjct: 89 LLDHIADGIISFDGAGRLLSLNPAAEQLFGYQSAEATGRSLGDILAIRSTGKDNPLLTPL 148 Query: 199 QQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLE 258 + +R E + G + S+S V + + + D+TE R+ + Sbjct: 149 VCCGEEHSRLTCEAEGIRSDGSRFPAALSLSRVQMK--GVWHFLGIVRDVTESRETGERL 206 Query: 259 GNILA----AMCSSPPFHEMGEI------ICRNIESVLNESHVSLFALRNGMPIHWASSS 308 + +SP + R + S + + ++ Sbjct: 207 RETNEKLDTLIQASPQGIVAVDCGGKVTLWNRAAVEIFGWSAEEVLGKPYPVAPAERAAE 266 Query: 309 HGA------EIQNAQSWSATIRQRDGAPAGIL---QIKTSSGAETSAFIERVADISQHMA 359 H + + R++DG+P + I ++DIS Sbjct: 267 HRKLRELVLQGKRITDVELRRRRKDGSPIDVSLSAAPICDGSGTPLGVITIISDISA--- 323 Query: 360 ALALEQEKSRQHI 372 ++++ Q + Sbjct: 324 -----RKRNEQEL 331 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 947 bits (2448), Expect = 0.0, Method: Composition-based stats. Identities = 206/831 (24%), Positives = 356/831 (42%), Gaps = 54/831 (6%) Query: 5 DADNAADGIFFPA----LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 +A + + ++ + N ++ NPA ++ GY E+V+G N +L Sbjct: 319 EAQRREAERLQRINATVFDSSAEAIIITDLNANIISVNPAFTQITGYSPEDVLGKNPRIL 378 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAE--GKVYY 118 + R EL K+GS ++S ++ Sbjct: 379 SSGQQSKGFYRELWEALL----RDNFWQGELVNRHKNGSLYNIHLSISASRDGTGQLQHF 434 Query: 119 LALVRDASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS 174 + + D + + + R ++ + + + +LDP+ +I++ + +F M GY + Sbjct: 435 IGVTTDITERKQHESELRMESEKNMVLLRNASDGIHILDPDGNIIEASDSFCSMLGYQRN 494 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 E GM + + R Q E + G I ++ S P+ Sbjct: 495 EMLGMNVCQ-WDADFSDPRIVKLFRDQFTNKGRTQFETRHRRKDGTVIDVEISGYPLQL- 552 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNILAAMC--SSPPFHEMGEIICRNIESVLNESHVS 292 + DITE ++I A + I R + + + S Sbjct: 553 HGKPALFNSS-RDITERKKIEVEIQIAATAFEAQEGMLITDADRNILRVNRAFTDITGYS 611 Query: 293 LFALRNGMPIHWASSSH--------GAEIQNAQSWSATI--RQRDGAPAGI---LQIKTS 339 + P +S H + +W I ++++G + Sbjct: 612 AEEVIGKNPRILSSGLHDSHFYAAMWNTLVATGAWKGEIWNKRKNGEVYPERLAITAVKD 671 Query: 340 SGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD 399 + ++ ++DI+ H + + I L FDP+TGLPNR L + L + Sbjct: 672 ARGVVINYVASLSDITLH--------KAAEDEIRSLAFFDPLTGLPNRRLLMDRLQQALV 723 Query: 400 KAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF 455 + + + +D+ +++ D+LG+ D L +V R + ++ + RI G +F Sbjct: 724 ASSRSGKAGALLFLDLDNFKNLNDTLGHDIGDLLLQQVAQRLKNCVREGDTVARIGGDEF 783 Query: 456 VLVSLENDVSNITQIAD------ELRNVVSKPIMIDDKPFPLTLSIGISYDLGKN--RDY 507 V++ + +I + ++ + ++KP ++ T SIG + + D Sbjct: 784 VVMLEDLSAESIEAASQTEAVGWKIISTLNKPYHLEKFEVHSTPSIGATLFDSRPQIIDD 843 Query: 508 LLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFA 567 L A AM +K G N +FF P M + + R L A L+++I + L YQ Q+ Sbjct: 844 LFKQADIAMYQAKKAGRNTMRFFDPQMQDTLNTRTALEADLRKSIERREFNLFYQIQVD- 902 Query: 568 ETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNI 627 E G EAL RW P G V P+ FIPLAEE I NIG WV+ EAC QL W++ + Sbjct: 903 EMNRPVGAEALIRWIHPKRGMVSPAEFIPLAEETDLILNIGLWVLQEACAQLKTWQNNPL 962 Query: 628 -HIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQI 686 L+VN+SA FR + QV + + ID +L +E+TESM+ E+ + + Sbjct: 963 TRNLVLAVNVSAKQFRQSDFATQVRVFVEKYAIDPSKLKLELTESMLQENIEDTILIMNA 1022 Query: 687 LRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQS 746 L+++GV S+DDFGTG+S L + LP+ ++KID+SFV ++ A++ AI ++ +S Sbjct: 1023 LKEIGVQFSLDDFGTGYSSLQYIKKLPLNQLKIDQSFVHDLDFDRDDKAIVRAIIAMAKS 1082 Query: 747 LNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPL 797 L L V+AEGVET+EQ ++L C QGY FS+PLP E + + L Sbjct: 1083 LQLDVIAEGVETQEQRQLLLNKGCTHFQGYLFSKPLPIREFDALLERAIEL 1133 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 55/353 (15%), Positives = 107/353 (30%), Gaps = 43/353 (12%) Query: 40 AAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGS 99 ++ G R E+ L P + + +A+ Sbjct: 248 RFQQDLGDGRGELTAFRASRLYPFAVLTHIDRTRALQKWQAEAKTLLA-----------V 296 Query: 100 KIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIV 159 I A+S ++ +Y L ++ + + R D +I+ D +I+ Sbjct: 297 VIPVLLAISLLAM---AFYRRLAQNEAQRREAERLQRINATVFDSSAEAIIITDLNANII 353 Query: 160 QCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTG 219 N AFT++ GY + G P +L+ + L + L + Q E + + G Sbjct: 354 SVNPAFTQITGYSPEDVLGKNP-RILSSGQQSKGFYRELWEALLRDNFWQGELVNRHKNG 412 Query: 220 EKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILA----AMCSSPPFHEMG 275 I SIS D LQ+ + +DITE +Q + ++ + Sbjct: 413 SLYNIHLSISASRDGTGQLQHFIGVTTDITERKQHESELRMESEKNMVLLRNASDGIHIL 472 Query: 276 EIIC------RNIESVLNESHVSLFAL-------RNGMPIHWASSSHGAEIQNAQSWSAT 322 + + S+L + + P + + Sbjct: 473 DPDGNIIEASDSFCSMLGYQRNEMLGMNVCQWDADFSDPRIVKLFRDQFTNKGRTQFETR 532 Query: 323 IRQRDGAPAG--ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIE 373 R++DG I + + F DI+ E++K I+ Sbjct: 533 HRRKDGTVIDVEISGYPLQLHGKPALFNSS-RDIT--------ERKKIEVEIQ 576 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 937 bits (2424), Expect = 0.0, Method: Composition-based stats. Identities = 210/815 (25%), Positives = 368/815 (45%), Gaps = 52/815 (6%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 A+EQ+ + V+ N N E+ + NP+ ++ GY R E IG N +L + P Sbjct: 597 LLQAVEQSPVAIVITNRNAEIEYVNPSFTRVTGYSRLEAIGQNPRILQSGE----APSDT 652 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYYLALVRDASVEMAQ 131 + + + +K+G W + +++ + +YLA+ D + + Sbjct: 653 YRSLWQTLLEGKVWTGLFHNRRKNGELFWEKASIAPIIGDHGEVTHYLAVKEDVTERLRA 712 Query: 132 ----KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY-CISEASGMQPDTLLN 186 +E + P+++L + + CNRA E+ GY ++ G + Sbjct: 713 DKLLQESEEAFRRLFEDAKDPLLLL-KDGSFIDCNRATLELLGYGSKAQLLGRDAADISP 771 Query: 187 IPEFPA----DNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 + + L + + E+ G + ++ +++P+ + + + Sbjct: 772 ARQPDGQASGEKAAALIAAALRIGYHRFEWTHQRADGSPVPVEVTLTPITLRGEVILHTL 831 Query: 243 MTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICR---NIESVLNESHVSLFALRNG 299 + DI+E R + AA S + + R ++ + + +R Sbjct: 832 --WRDISERRVTETRLRLLAAAFEHSAEAIMVSDRDNRILEVNDAFCRLTGYAADEVRGS 889 Query: 300 MPIHWASSS--------HGAEIQNAQSWSATI--RQRDGAPAG---ILQIKTSSGAETSA 346 P +S I + W + R++DG+ + + T Sbjct: 890 DPRLLSSGRTSAEEYRTMWQAINSTGHWQGEVWDRRKDGSYYPKWLSISTIRGAEGNTEY 949 Query: 347 FIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS--- 403 +I DIS E++ + + I L FD +T LPNR+NL LD + A Sbjct: 950 YIGSFVDIS--------ERKAAEEKISHLAHFDTLTDLPNRSNLQGRLDQALASARREGH 1001 Query: 404 ---PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL 460 V + +D +++ D+LG+ D LLEV R R ++ + R+ G +FV+V Sbjct: 1002 GRSVAVMFLDLDRFKNINDTLGHHVGDALLLEVAARLRSSVRDSDVVARLGGDEFVVVLT 1061 Query: 461 ENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDY 518 D ++A ++ +S+ I+ T SIGI+ G++ + L+ A AM + Sbjct: 1062 GADALAAERVAGKILKALSRAYQIEGHALHSTSSIGIAVFPADGESVEVLMQNADAAMYH 1121 Query: 519 IRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEAL 578 + G N QFF+ +MNE +R L L A+ Q L YQPQ+ A+ ++ +EAL Sbjct: 1122 AKSAGRNNVQFFTASMNEAASDRRQLEEDLHLALQQKQFVLHYQPQVDAQ-RRVFAVEAL 1180 Query: 579 ARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWR-SQNIHIPALSVNLS 637 RW P HG VPP+RF+PLAE+ G I IG+WV+ AC Q+ W ++VN+S Sbjct: 1181 LRWQHPHHGLVPPARFVPLAEDTGLIVPIGQWVLETACAQIKAWSVDARTRKLQVAVNVS 1240 Query: 638 ALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVD 697 A FR + A+ G + +L +E+TES+++++ + ++ ++ +GV S+D Sbjct: 1241 ARQFRQPDFVELLRQAIDNSGANPARLKLELTESLVLDNVADTIDKMNAIKLLGVTFSMD 1300 Query: 698 DFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVE 757 DFGTG+S LS L LP+ ++KID++FV R + + + I ++G+SL L VVAEGVE Sbjct: 1301 DFGTGYSSLSYLTRLPLDQLKIDRAFVCRLPENRSDAVIAQTIVTMGRSLGLKVVAEGVE 1360 Query: 758 TKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 T+ Q + L C QG+ FSRPL + ++ Sbjct: 1361 TEAQRQFLDSHGCDGYQGFLFSRPLAVDAFEDFLQ 1395 Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 79/402 (19%), Positives = 137/402 (34%), Gaps = 43/402 (10%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 ++ + + L ++G V + V+ N E+++GY E+IG + + Sbjct: 464 EMEERNRQLLAEMETLLGNALVGIVHL-RQRCVVSCNRRLEEIFGYAPGELIGKSSQVFY 522 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS-AEGKVYYLA 120 P E I A S EL L +KDGS W + ++ + Sbjct: 523 PSI---EVFEKIGARAYAVVAENRNFSGELTLRRKDGSLFWGALTGRAIDPSQPHAGSIW 579 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 + D S +E++R L+ AV+ +++ + I N +FT + GY EA G Sbjct: 580 VFADISERREAEEESRNLLQAVEQSPVAIVITNRNAEIEYVNPSFTRVTGYSRLEAIGQN 639 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 P +L E P+D L Q L + F + GE W KASI+P+ + + Sbjct: 640 P-RILQSGEAPSDTYRSLWQTLLEGKVWTGLFHNRRKNGELFWEKASIAPIIGDHGEVTH 698 Query: 241 LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEII-----------CRNIESVLNE- 288 + D+TE + +L A F + + + R +L Sbjct: 699 YLAVKEDVTERLRADKLLQESEEAFRR--LFEDAKDPLLLLKDGSFIDCNRATLELLGYG 756 Query: 289 SHVSLFA----------LRNGMPIHWASSSHGAEIQNAQSWSAT--IRQRDGAPAGILQI 336 S L +G +++ A ++ DG+P + Sbjct: 757 SKAQLLGRDAADISPARQPDGQASGEKAAALIAAALRIGYHRFEWTHQRADGSPVPVEVT 816 Query: 337 KTSS--GAETSAFIERVADISQHMAALALEQEKSRQHIEQLI 376 T E DIS E+ + + L Sbjct: 817 LTPITLRGEVI-LHTLWRDIS--------ERRVTETRLRLLA 849 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 64/394 (16%), Positives = 128/394 (32%), Gaps = 31/394 (7%) Query: 7 DNAADGI---FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 A F E G + + +++ NPA ++ + D + Sbjct: 339 LRANSERLEIFQRLAENAGQGIGMAQLDGSLLYANPALRRMIDMPQGAA---CSDYSFKQ 395 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWT--RFALSKVSAEGKVYYLAL 121 ++H + E++L G + +A+ + Sbjct: 396 FYSREEANRLQHAVLPMLLPAGQWTGEIELRSLSGRTTPAIHTLFVVHNTADEPPVIATV 455 Query: 122 VRDASVEMAQKEQTRQL----IIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 + D S +E+ RQL + + ++ L +R +V CNR E+FGY E Sbjct: 456 LADISERKEMEERNRQLLAEMETLLGNALVGIVHL-RQRCVVSCNRRLEEIFGYAPGELI 514 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 G E R ++ + E L + G W + + D Sbjct: 515 GKSSQVFYPSIEVFEKIGARAYAVVAENRNFSGELTLRRKDGSLFWGALTGRAI-DPSQP 573 Query: 238 LQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMG------EIICRNIESVLNESHV 291 + F+DI+E R+ + N+L A+ SP + E + + V S + Sbjct: 574 HAGSIWVFADISERREAEEESRNLLQAVEQSPVAIVITNRNAEIEYVNPSFTRVTGYSRL 633 Query: 292 SLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGI---LQIKTSSG 341 L++G S + + W+ R+++G + Sbjct: 634 EAIGQNPRILQSGEAPSDTYRSLWQTLLEGKVWTGLFHNRRKNGELFWEKASIAPIIGDH 693 Query: 342 AETSAFIERVADISQHMAALALEQEKSRQHIEQL 375 E + ++ D+++ + A L Q +S + +L Sbjct: 694 GEVTHYLAVKEDVTERLRADKLLQ-ESEEAFRRL 726 Score = 85.8 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 78/253 (30%), Gaps = 19/253 (7%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 LV A E+ ++ + + + + ++ N A M A Sbjct: 332 LVERDRQLRANSERLEIFQRLAENAGQGIGMAQLDGSLLYANPALRRMIDMPQGAACSDY 391 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 E + + +L + E L + +G ++ V++ Sbjct: 392 SFKQFYSREEANRLQHAVLPMLLPAGQWTGEIELRSLSGRTTPAIHTLFVVHNTADEPPV 451 Query: 241 LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEII---------CRNIESVLNESHV 291 + +DI+E +++ + +LA M + +G + R +E + + Sbjct: 452 IATVLADISERKEMEERNRQLLAEMETLLGNALVGIVHLRQRCVVSCNRRLEEIFGYAPG 511 Query: 292 SLFALRNGM--PIHWASSSHGAEIQ----NAQSWSAT--IRQRDGAPAGILQIKTSSGAE 343 L + + P GA +++S +R++DG+ + Sbjct: 512 ELIGKSSQVFYPSIEVFEKIGARAYAVVAENRNFSGELTLRRKDGSLFWGALTGRAIDPS 571 Query: 344 TSAF--IERVADI 354 I ADI Sbjct: 572 QPHAGSIWVFADI 584 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 930 bits (2405), Expect = 0.0, Method: Composition-based stats. Identities = 211/832 (25%), Positives = 356/832 (42%), Gaps = 61/832 (7%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 ++L A ++ + ++ + + + N EKL GY E++G +I+ L Sbjct: 10 IRLEQALRTSEARLHSFFDATPDALLISDAHGTITMANQQVEKLLGYVAAELVGKSIEDL 69 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA 120 +P + +HP +AR G ++ +KDGS+ +LS++ + +++ + Sbjct: 70 VPNRFKASHPVLRSEFTASPRARRMGNGMAVKARRKDGSECDVDVSLSRIETDEGMFFAS 129 Query: 121 LVRDASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCI--- 173 +RD S ++E+ R+ L + + D + +V N F + Sbjct: 130 ALRDISERKRKEEELRRQNGVLSTIFQSFPGGITLFDADLRLVAFNDQFKALLDLPDVLF 189 Query: 174 -------SEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKA 226 P P + K + E + G + Sbjct: 190 EQPEPDFETLIRYNAARGEYGPGDPEQQVAAIIARTKKFVPHKIE--RVRPDGTS--LSI 245 Query: 227 SISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSS--PPFHEMGEIICRNIES 284 P+ + ++DIT+ +Q + AA S + +I R + Sbjct: 246 RGVPLASG-----GFLSIYTDITDRKQSEEQLRIAAAAFESQTCMIITDANRVIQRVNRA 300 Query: 285 VLNESHVSLFALRNGMPIHWASSSH--------GAEIQNAQSWSATI--RQRDGAPAG-- 332 + + S P S H I +W I R+++G Sbjct: 301 FIETTGYSAEEAVGQTPRLLQSGRHGADFYREMWETIHRTGAWQGEIWGRRKNGEVYPKW 360 Query: 333 -ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLH 391 + + S +I DI+ E++K+ + I L FD +TGLPNR L Sbjct: 361 LSISAVVGTNGRVSHYIGTHNDIT--------ERKKAEERINALAFFDQLTGLPNRTLLL 412 Query: 392 NYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYL 447 + L + + + I +D+ + + D+LG+ DQ L +V R ++ + Sbjct: 413 DRLKQTILSSGRSDSHGALLFIDLDNFKTLNDTLGHDVGDQLLKQVALRLTHCVRDGDTV 472 Query: 448 CRIEGTQFVLVSLEND------VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDL 501 R+ G +FV+V + + +A+++ +++ + + SIG + Sbjct: 473 ARLGGDEFVVVLANLNTNDKEAAQDTETVAEKILATLNQTYQLGHVTHHSSASIGATLFK 532 Query: 502 GK--NRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKL 559 G D L+ A +M + G N +FF P+M VK R + L A++ Q L Sbjct: 533 GPLIPIDDLMKQADLSMYKAKAAGRNAVRFFDPSMEIAVKVRAEMEDDLLRALAEKQFLL 592 Query: 560 VYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQL 619 YQ Q+ L G E L RW P G V P+ FIPLAEE G I +G WV+ AC QL Sbjct: 593 HYQAQM--VGERLTGAEVLLRWQHPQRGMVSPAEFIPLAEETGLILPLGHWVLETACTQL 650 Query: 620 AEWRSQN-IHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDT 678 A+W + + L+VN+SA FR N +QV + G + +L +E+TES+++E+ Sbjct: 651 AQWAGRPEVAHLTLAVNVSAHQFRQNDFVDQVLGVLEKTGANPQRLKLELTESLLVENVE 710 Query: 679 EIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLE 738 +I ++ L+ GVG S+DDFGTG+S LS L LP+ +KID+SFV LT+ ++ Sbjct: 711 DIIDKMAALKHRGVGFSLDDFGTGYSSLSYLKRLPLDHLKIDQSFVRDVLTDSNDASIAR 770 Query: 739 AITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 I ++ SL L V+AEGVET+ Q + L C QGY+FSRPLP E+ + Sbjct: 771 TIVALANSLGLGVIAEGVETEAQRDFLASSGCHTYQGYYFSRPLPIEDFESF 822 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 924 bits (2389), Expect = 0.0, Method: Composition-based stats. Identities = 206/831 (24%), Positives = 375/831 (45%), Gaps = 57/831 (6%) Query: 1 MKLTDADNAADGIF---FPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNI 57 + +T+ + A + + +NE + + N AA G+ +EE++ I Sbjct: 318 VDITERKK-MEERLELTQFASDYAPDCILWVNEQARICYANEAALHCHGFSKEELLSMTI 376 Query: 58 DML---IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEG 114 L P D+ AH ++H G++ E + ++DGS + + V Sbjct: 377 HDLDPDFPPDVWLAHWHELQH--------KGGITIETRHRRRDGSIFPIEVSANFVKFGD 428 Query: 115 KVYYLALVRDASVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFG 170 K Y +A RD + + R +L + + +D + E+ G Sbjct: 429 KEYNIAYHRDITERKKSEAALRYSEQRLRDVSEASGEYLWEIDINLGYTYVSNRSIEVKG 488 Query: 171 YCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISP 230 Y + G P + + R + + K + + +T +G +W + S P Sbjct: 489 YTPEQLLGHAPAEFMPPEDIDMAAR-IVNLAISKNQPFKLQHRDITPSGAILWEEVSGVP 547 Query: 231 VYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMC--SSPPFHEMGEIICRNIESVLNE 288 YD HL L T +IT + + AA + + I + ++ Sbjct: 548 FYDDAGHLLGLRGTGRNITGRKLKEEQLRVAAAAFETHEAIMITDAHGTIIKVNQAFQRI 607 Query: 289 SHVSLFALRNGMPIHWASSS--------HGAEIQNAQSWSATI--RQRDGAPAG---ILQ 335 + S + P ++ ++ W I +++ G + Sbjct: 608 TGYSQEEVLGENPRILSAGRNEKSFYSAMWQQLTTLGRWRGEIWDKRKSGQIYPKWMTIT 667 Query: 336 IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLD 395 +T+ ++ +DI+Q ++ + + I L +D +T LPNR L + L Sbjct: 668 AVRDENGKTTEYVAIFSDITQ--------RKLAEEEIRNLAFYDALTRLPNRRLLLDRLH 719 Query: 396 DLV---DKAVSP-VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIE 451 + ++ V + +D + + D++G+ + D L+EV R + ++ + R+ Sbjct: 720 AALSVSARSRRFGAVLFLDMDRFKTLNDTMGHDYGDLLLIEVAERIKLCVREIDTVARLG 779 Query: 452 GTQFVLVSLENDVS------NITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLG--K 503 G +FV++ E D +I IA+++R+ +S P + +K + SIG+ G + Sbjct: 780 GDEFVILVEEIDTRAEETSKHIAAIAEKIRSALSVPYRLKEKHHHSSPSIGVCLYRGIEE 839 Query: 504 NRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQP 563 + D LL A AM + +G N +FF P M + V+ R+ L L+ A+ N+QL+L YQ Sbjct: 840 STDDLLKHADMAMYQAKDSGRNAVRFFDPLMQQAVEARVTLENDLRHALPNDQLQLYYQI 899 Query: 564 QIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWR 623 Q+ G EAL RW P+ G V P+ FIP+AEE I +G WV+ AC QLA W Sbjct: 900 QVD-NDRRAIGAEALVRWIHPIRGMVSPAHFIPIAEETSLILEVGAWVLKTACLQLAVWA 958 Query: 624 SQNIH-IPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFK 682 + + L+VN+S F+ +++ + A+ I +L +E+TES+++ ++I + Sbjct: 959 DRPMTCNLILAVNVSVQQFKQVGFVEHIAELIRAYCIVPQRLKLELTESVVLNDVSDIVQ 1018 Query: 683 RIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITS 742 ++ L+ +GV LS+DDFGTG+S LS L +LP+ ++KID+SFV T++ +++ I + Sbjct: 1019 KMCALKSLGVRLSMDDFGTGYSSLSYLKNLPLDQLKIDQSFVRNIATDENDAVMVKTIIA 1078 Query: 743 IGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 + Q+ L V+AEGVET+ Q L++ C QGY+F +P P E+ + + Sbjct: 1079 MAQNFRLNVIAEGVETEAQLAFLKQNGCMCYQGYYFGKPAPIEQFQSQLEA 1129 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 62/393 (15%), Positives = 123/393 (31%), Gaps = 43/393 (10%) Query: 11 DGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHP 70 + L + + NP E++ G ++G I R+ + Sbjct: 73 EARLRTLFNTIKDLVWLKAPDGVYLACNPVVERMLGTAEAAIVGRTDYDFISREQADSFR 132 Query: 71 EYIRHNREGGKARVEGMSRELQLEKKD-GSKIWTRFALSKVSAE--GKVYYLALVRDASV 127 E+ R G + E L KD G + + V + + + RD + Sbjct: 133 EHDRAAMNTGTVCIN----EGWLTFKDTGYCGLFETSKTPVYDDTGQLIGVFGIARDITE 188 Query: 128 EMAQKEQT----RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDT 183 + +Q +D L V++ I+ CN+ ++ G ++ G Sbjct: 189 RKRAEAALKNSEQQARNLIDKLQVGVLLQSARAEILLCNQIALDLLGLSEAQLLGKSSFD 248 Query: 184 ----LLNIPEFPADNRIR-----LQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 +++ P + + R ++W+ S +P + Sbjct: 249 PDWNVIHEDGSPFPGSEHPVPVSIATKSLVHDVVMGVYRPSKRD--RVWLLVSAAPQLNP 306 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPP---FHEMGEIICRNIESVL---NE 288 ++ +V TF DITE +++ + A +P + IC E+ L Sbjct: 307 NNEVEQVVCTFVDITERKKMEERLELTQFASDYAPDCILWVNEQARICYANEAALHCHGF 366 Query: 289 SHVSLFALRNGMPIHWAS----SSHGAEIQNAQ--SWSATIRQRDGAPAGILQIKTSSG- 341 S L ++ +H E+Q+ + R+RDG+ I Sbjct: 367 SKEELLSMTIHDLDPDFPPDVWLAHWHELQHKGGITIETRHRRRDGSIFPIEVSANFVKF 426 Query: 342 AETSAFIERVADISQHMAALALEQEKSRQHIEQ 374 + I DI+ E++KS + Sbjct: 427 GDKEYNIAYHRDIT--------ERKKSEAALRY 451 Score = 157 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 46/397 (11%), Positives = 101/397 (25%), Gaps = 36/397 (9%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDM-- 59 + A ++ +++ +G +L + E++ N A L G +++G + Sbjct: 191 RAEAALKNSEQQARNLIDKLQVGVLLQSARAEILLCNQIALDLLGLSEAQLLGKSSFDPD 250 Query: 60 --LIPRDLRPA--HPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAE 113 +I D P + + + + + K+D ++W + + Sbjct: 251 WNVIHEDGSPFPGSEHPVPVSIATKSLVHDVVMGVYRPSKRD--RVWLLVSAAPQLNPNN 308 Query: 114 GKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCI 173 + D + +E+ A D+ ++ ++ + I N A G+ Sbjct: 309 EVEQVVCTFVDITERKKMEERLELTQFASDYAPDCILWVNEQARICYANEAALHCHGFSK 368 Query: 174 SEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYD 233 E M L P+FP D + L E R G I+ S + V Sbjct: 369 EELLSMTIHDL--DPDFPPDVWLAHWHELQHKGGITIETRHRRRDGSIFPIEVSANFVK- 425 Query: 234 VLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVL------- 286 + + DITE ++ + Sbjct: 426 -FGDKEYNIAYHRDITERKKSEAALRYSEQRLRDVSEASGEYLWEIDINLGYTYVSNRSI 484 Query: 287 ---NESHVSLFALRNGMPIHWASSSHGAEI-------QNAQSWSATIRQRDGAPAGILQI 336 + L + A I GA Sbjct: 485 EVKGYTPEQLLGHAPAEFMPPEDIDMAARIVNLAISKNQPFKLQHRDITPSGAILWEEVS 544 Query: 337 KTSSGAETSAFIERVADISQHMAALALEQEKSRQHIE 373 + + + ++ + + Sbjct: 545 GVPFYDDAGHLLGL-----RGTGRNITGRKLKEEQLR 576 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 920 bits (2378), Expect = 0.0, Method: Composition-based stats. Identities = 201/815 (24%), Positives = 357/815 (43%), Gaps = 59/815 (7%) Query: 15 FPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIR 74 ALE++ + + +E + + N +L + REE+IG + +++ HP Sbjct: 12 LSALEESSV-ISITDEKGIITYVNHNFCQLSKFNREELIGKSHNIV----DSGFHPRNYF 66 Query: 75 HNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYY--LALVRDASVEMAQK 132 + +R + E++ KDG++ W L + Y +A+ D + + Sbjct: 67 KSLWDTISRGKVWKGEMKNRGKDGTEYWLSMTLVPFMNDSGFLYQYVAIGTDITKRKLME 126 Query: 133 EQTRQLIIAVDHLDRP------VIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 E + + + + V + D + I N F E+ Y + E G ++N Sbjct: 127 ESLAKTMKDLHDIKNALDESSIVAITDDKGVITYVNDKFCEISRYEVDELVG-NTHRVIN 185 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 + + + + + E + G + W+ +I P D V + Sbjct: 186 SRYHSKSFFKLMWETIKQGRVWKGEVKNRAKDGTEYWMNTTIVPFLDDRGVPYQYVSIRT 245 Query: 247 DITEERQIRQLEGNILA-----------------AMCSSPPFHE------MGEIICRNIE 283 DIT+ + L + E + E Sbjct: 246 DITDRIEAETALAEALQNDFRRTVQNLQNCVFKIVTDQRGNITYTLCEGKIAEELGLTSE 305 Query: 284 SVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAE 343 +L ++ +F + +S + ++ G I E Sbjct: 306 RMLRKTSYEIFPYEVAEQMESYFRR----AFAGESVTFELKL-SGNDYYITLSPIEENGE 360 Query: 344 TSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS 403 + + DI+ E++K+ + I + +D +T LPNR H L + + KA Sbjct: 361 IVEMVGSMIDIT--------ERKKAEETIRYMAHYDSLTNLPNRTLFHEKLAEAMLKAKQ 412 Query: 404 ----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVS 459 V I +D +++ D+LG++ D L V NR L+ + + R+ G +F + Sbjct: 413 KDEKIGVMFIDLDRFKNINDTLGHSIGDVLLQAVANRLICCLRKEDSVSRLGGDEFAIFL 472 Query: 460 LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMD 517 +IA + +S+ I +D +T SIGIS D G + + LL A AM Sbjct: 473 TGVTHREAGEIAQRIITSMSESITLDHIEIFITPSIGISMYPDDGDDIEALLKHADAAMY 532 Query: 518 YIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEA 577 ++ G N +QFFS +++++ ++L L L++A+ Q L YQP+I +TG++ G+EA Sbjct: 533 LAKEQGKNNYQFFSEELHQVLAKKLQLERELRKALDEKQFTLHYQPKIHLQTGQIIGMEA 592 Query: 578 LARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLS 637 L RW P G +PP +FIP+AEE G I +G WV+ AC+Q W+ A++VN+S Sbjct: 593 LIRWDHPDLGLIPPIQFIPIAEETGLIVPLGEWVMRTACQQTKAWQEAGFTQLAVAVNIS 652 Query: 638 ALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVD 697 F N L ++ + G+ L +EITESM + + + + L+ +GV +S+D Sbjct: 653 LRQFMQNNLIEMITSILEETGLAPQYLELEITESMAL-NVDYTIRILNRLKALGVSISID 711 Query: 698 DFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVE 757 DFGTG+S LS L P+ +KID+SF+ + A+++ I + ++ + V+AEGVE Sbjct: 712 DFGTGYSSLSYLSQFPIDRLKIDQSFLRNL--NPQNQAIIKTIIHMAHNMKIAVIAEGVE 769 Query: 758 TKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 T E + L++ C +QGYF+S+PLP +EI ++ Sbjct: 770 THEHVDFLKEQLCNEVQGYFYSKPLPTKEIDSFLQ 804 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 919 bits (2377), Expect = 0.0, Method: Composition-based stats. Identities = 199/802 (24%), Positives = 345/802 (43%), Gaps = 44/802 (5%) Query: 29 NENDEVMFFNPAAEKLWGYKREEVIGNN---IDMLIPRDLRPAHPEYIRHNREGGKARVE 85 + + ++F + ++L GY E++G + + R +R E + Sbjct: 113 DADWTMVFVSDGCQELSGYASSEILGKTGVSWEEITHPQDRG----RVRACIEDAIGSGQ 168 Query: 86 GMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL-ALVRDASVEM----AQKEQTRQLII 140 + + ++ K G W + E + + D SV A + ++ Sbjct: 169 RFAVQYRIVCKSGQVKWVIERGVAIRDELDESVIEGFIEDISVRRTTLEALEAAEQRYRN 228 Query: 141 AVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQ 200 +H + + H + N A +++GY ++A + + R Sbjct: 229 IFEHASEGIFQSTRDGHYLAANPALAKLYGYDNAQALMTDLADIERRLYVQPNRREEFLT 288 Query: 201 LLW-KTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEG 259 L+ A E + R G +IWI + V+ T DI+E ++ Sbjct: 289 LIEKNGAILNFESEVYRRDGSRIWISENAHVVFGPQGEFICYEGTVQDISERKRTEAHLQ 348 Query: 260 NILAAMCSSPPFHEMGEIICR---NIESVLNESHVSLFALRNGMPIHWASSS-------- 308 + +S + + R + + + P ++ + Sbjct: 349 LMAMVFSNSNEAIIVTDASNRIIATNPAFTCLTGYQPDDVIGKNPRILSAGTTPTEVFSD 408 Query: 309 HGAEIQNAQSWSATI--RQRDGAPAG---ILQIKTSSGAETSAFIERVADISQHMAALAL 363 + +W + R+++G + + + I DIS Sbjct: 409 MWTCLHREGAWQGELWDRKKNGEAYPKWLSISLVRDEDGQIRNHIGSFIDIS-------- 460 Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVID 419 E + +++ I L D +T L NR +LH L + + LI +D + + D Sbjct: 461 ELKATQERIRHLAHHDTLTNLANRFSLHEKLAQALAFCKRNRMQLALMLIDLDRFKTIND 520 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL-ENDVSNITQIADELRNVV 478 +LG+ D+ L++V R ++ + R+ G +FV+ ++ +AD++ + Sbjct: 521 TLGHQAGDELLVQVAKRLSHAVRESDIVARLGGDEFVIALPGIGSPADAAHLADDITREI 580 Query: 479 SKPIMIDDKPFPLTLSIGISYDLGKNRD--YLLSTAHNAMDYIRKNGGNGWQFFSPAMNE 536 S P +I + + SIGI G + LL A AM + + NG +QFF+ MN Sbjct: 581 SAPYLIKGQELRTSPSIGICVYPGDGSEIGDLLKNADVAMYHAKANGRGNYQFFTEDMNI 640 Query: 537 MVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIP 596 ER+ L + L+ AI+ + L YQPQ+ +G + G+EAL RW P G V P+ FIP Sbjct: 641 ATTERMCLESDLRLAITRREFLLHYQPQLDLRSGTIVGVEALIRWQHPTRGLVSPADFIP 700 Query: 597 LAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHA 656 +AEE G I IG WV+ EACRQL W+++ I +S+NLSA F LP ++ + + A Sbjct: 701 IAEESGMIAAIGDWVLEEACRQLKVWQNRGITHLRMSINLSAGQFLDKTLPARIHELLAA 760 Query: 657 WGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTE 716 + +L +E+TESM M E ++ L G+ LS+DDFGTG+S L+ L LP+ Sbjct: 761 NDLSADRLDLEVTESMSMASPDESISVMKTLSSSGLTLSIDDFGTGYSSLAYLKLLPIHT 820 Query: 717 IKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGY 776 +KID+SFV ++ + + + L L VVAEGVET+ Q + L I C +QGY Sbjct: 821 LKIDRSFVKDIESDPNDADICDVTVLLAHKLGLEVVAEGVETEAQLKFLLSIGCEKVQGY 880 Query: 777 FFSRPLPAEEIPGWMSSVLPLK 798 S+PLPA++ ++ + P+K Sbjct: 881 LISKPLPADQAERFIRNNPPMK 902 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 100/262 (38%), Gaps = 5/262 (1%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 +A AA+ + E G + + NPA KL+GY + + ++ + Sbjct: 217 EALEAAEQRYRNIFEHASEGIFQSTRDGHYLAANPALAKLYGYDNAQALMTDLADI--ER 274 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYYLALV 122 P + ++ E ++ ++DGS+IW V + Y V Sbjct: 275 RLYVQPNRREEFLTLIEKNGAILNFESEVYRRDGSRIWISENAHVVFGPQGEFICYEGTV 334 Query: 123 RDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPD 182 +D S + + + + + + +IV D I+ N AFT + GY + G P Sbjct: 335 QDISERKRTEAHLQLMAMVFSNSNEAIIVTDASNRIIATNPAFTCLTGYQPDDVIGKNP- 393 Query: 183 TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 +L+ P + + L + Q E + GE SIS V D ++N + Sbjct: 394 RILSAGTTPTEVFSDMWTCLHREGAWQGELWDRKKNGEAYPKWLSISLVRDEDGQIRNHI 453 Query: 243 MTFSDITEERQIRQLEGNILAA 264 +F DI+E + ++ ++ Sbjct: 454 GSFIDISELKATQERIRHLAHH 475 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 919 bits (2376), Expect = 0.0, Method: Composition-based stats. Identities = 204/833 (24%), Positives = 345/833 (41%), Gaps = 56/833 (6%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREE--VIGNNIDMLI 61 + + ++ + ALE G N + FF+ ++ GY E G+ + Sbjct: 74 EEKLHDSEERWKFALEGAGDGVWDWNPQTDEAFFSKRWNEIIGYTEHEFPATGSAWVAHL 133 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFA---LSKVSAEGKVYY 118 D + I+ + E E ++ KDGS W +S+ + Sbjct: 134 HPDDKDRVLSVIQGYLTDSR---EIYDVEYRIRCKDGSWKWILARGMLVSRDVYGKPLRM 190 Query: 119 LALVRDASVEMAQKE----QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS 174 + D + +E + D L V +++ + IV N + + G Sbjct: 191 IGTHSDITQRKVDEELVLKNLEKWKKLFDILPIGVSIVNSKNGIVDFNPSLEAILGISKE 250 Query: 175 EASGMQP--DTLLNIP--EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISP 230 L AD L+ + + + +G+ IW S +P Sbjct: 251 GLLQGDYDNWEYLRTDNTHMDADEFPSLRAIKEQRVVKDVVIGVKKESGDIIWTSVSAAP 310 Query: 231 VYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMC--SSPPFHEMGEIICRNIESVLNE 288 + V +DIT+ +Q A + ++ R + Sbjct: 311 LSYDSNSC---VTVTTDITKRKQFESELRVSATAFETQEGILITDENNVMLRTNAAFTAI 367 Query: 289 SHVSLFALRNGMPIHWASSS--------HGAEIQNAQSWSATI--RQRDGAPAG---ILQ 335 + + P +S I W I R+++G + Sbjct: 368 TGYTNKEAIGQNPRLLSSGRQNASFYSAMWKAINTTGVWEGEIWNRRKNGEIYPEHLTVT 427 Query: 336 IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLD 395 + ++ ++D++Q ++ + + IE L FDP+T LPNR L + L Sbjct: 428 AVKDRNGMVTNYVGVLSDLTQ--------RKAAEEKIENLAFFDPLTKLPNRRLLLDRLK 479 Query: 396 DLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIE 451 + A V I +D+ + + D+ G+ D L +V R ++ + R Sbjct: 480 QAMASATRSVTNGAVLFIDLDNFKALNDTYGHPMGDLLLQQVAKRLVSSVRDGDTVSRFG 539 Query: 452 GTQFVLVSLEND------VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLG--K 503 G +FV++ D S + +++ + +P +I + T SIG + + Sbjct: 540 GDEFVVLLEGFDENPLDAASQAETVGEQIFAALRQPYLIGTHEYHGTSSIGATLFNDKQQ 599 Query: 504 NRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQP 563 + D L+ A AM +K G N +FF P M E + +R L L++AI N+Q +L YQ Sbjct: 600 SIDELMKQADIAMYQAKKEGRNVLRFFDPQMQETIAKRTALEGDLRKAIENHQFQLHYQI 659 Query: 564 QIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWR 623 Q+ E+ +G EAL RW P HG V P +FIPLAEE I IG WV+ AC ++ W+ Sbjct: 660 QVD-ESRHPFGAEALIRWFHPEHGMVSPDQFIPLAEESDLILPIGYWVLETACARIQRWQ 718 Query: 624 -SQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFK 682 LSVN+SA FR NQV + + I+ L +E+TESM++++ + Sbjct: 719 HDAKTSGFVLSVNVSAKQFRQTDFVNQVQSLIQQYEINPSLLKLELTESMLLDNIEDTIA 778 Query: 683 RIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITS 742 + L+++GV S+DDFGTG+S L L LP+ ++KID+SFV + A++ I + Sbjct: 779 TMSALKELGVKFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFVRDIAVDASDRAIVRTIIA 838 Query: 743 IGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 + SL+L V+AEGVET+EQ + L C+ QGY F +P+P E+ + L Sbjct: 839 MAHSLDLDVIAEGVETEEQQKHLSSKGCKNFQGYLFGKPVPIEQFETSLRKSL 891 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 910 bits (2354), Expect = 0.0, Method: Composition-based stats. Identities = 199/819 (24%), Positives = 368/819 (44%), Gaps = 50/819 (6%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGY-KREEVIGNNIDMLIPRD 64 ++ F +E ++ ++ +++ N A+ + G ++IG +I +I Sbjct: 111 RLRESEERFRRLVELAPDAILV-HQGGTIVYANRQAQIMMGAPTPTDLIGRSIIEIIDPA 169 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRD 124 + ++ G + + E++L + DG ++ + + G ++ RD Sbjct: 170 CHDLVAKRLKLLARGEQLPL----VEMRLVRLDGGQVEVESTMGMTTYGGHRAMQSVWRD 225 Query: 125 ASVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 S + ++ + +I D E IV N ++G+ E G Sbjct: 226 ISARKQAEAASQAAKDHFLAFARSTPDALIAFDEEGRIVSWNEGAEAVYGFRQDEILGSP 285 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQD-----EFLLLTRTGEKIWIKASISPVYDVL 235 L+ + A N ++++ R E L ++GE+ ++ S+ + Sbjct: 286 LSRLI-PERYHAINAAWVKRMAKDRGRHNFTGKPIEAHGLRKSGEEFPVEYSVGRWREA- 343 Query: 236 AHLQNLVMTFSDITEERQIRQLEGNILAAMCSSP------PFHEMGEIICRNIESVLNES 289 + DI++ +Q + ++ A+ SP + + + V + Sbjct: 344 -GRNFFSVAARDISKRKQSEEKLRHLSQAVEQSPADVVITNAEGIIQYVNPRFSQVTGYA 402 Query: 290 HVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG---ILQIKTS 339 + L++G S I + W + R++DG+ I+ Sbjct: 403 SKEVIGKKPSILKSGRTPAALYDSLWETISAGKEWRGELMNRKKDGSLFWQHAIISPIRD 462 Query: 340 SGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD 399 + + +I DIS +++ + + + +D +TGLPNR + L + Sbjct: 463 NSGVITHYISVKEDISI--------RKEYEERLVRQANYDALTGLPNRILAMDRLKQAIA 514 Query: 400 KAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF 455 +A + L+ +D + V D+LG+A D L E R + L+ + R+ G +F Sbjct: 515 QAQRYNRKVALMLLDLDDFKKVNDTLGHAAGDLLLKEAALRLVDCLREGDTVARLGGDEF 574 Query: 456 VLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTA 512 VL+ + D S+ +A+++ ++P + + SIGI+ ++ L+ A Sbjct: 575 VLLLPDLTDTSSAEVVAEKILAACNQPFDVGGHEAYIAGSIGIAIFPDDERDPILLMRNA 634 Query: 513 HNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGEL 572 AM ++ G +++F+P MN E + + + L+ AI N++K+ YQP + + TG L Sbjct: 635 DAAMYRSKREGKGVFRYFTPEMNARALEHMRMESQLRHAIERNEMKVHYQPLVDSGTGRL 694 Query: 573 YGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPAL 632 G EAL RW +P+ G V P +FIPLAEE G I +IG WV+ ACR A W+ + I + Sbjct: 695 VGAEALLRWSNPVLGEVSPEQFIPLAEETGLILSIGAWVLRTACRDAASWQRPDHEIF-V 753 Query: 633 SVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGV 692 +VN+S F+ L V +++ G+ L +E+TES+++EH E IQ L +GV Sbjct: 754 AVNISGKQFQKRTLVEIVRSSLNESGLPPACLELELTESVLLEHTQETLSIIQELESLGV 813 Query: 693 GLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVV 752 G ++DDFGTGFS +S L P +KID+SF+ + L+++I ++ S++L VV Sbjct: 814 GFAIDDFGTGFSSISYLRRFPFDTLKIDRSFIKDLGDNEGDADLVKSIIAMANSMSLKVV 873 Query: 753 AEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 EGVET Q E LR C + QG+ +SRP+P ++ + Sbjct: 874 GEGVETHGQREFLRLSGCHIAQGWLYSRPIPGKDFQELI 912 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 108/262 (41%), Gaps = 2/262 (0%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + A AA F + +E ++ +N AE ++G++++E++G+ + LI Sbjct: 231 QAEAASQAAKDHFLAFARSTPDALIAFDEEGRIVSWNEGAEAVYGFRQDEILGSPLSRLI 290 Query: 62 PRDLRPAHPEYI-RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA 120 P + ++ R ++ G+ G E +K G + +++ + G+ ++ Sbjct: 291 PERYHAINAAWVKRMAKDRGRHNFTGKPIEAHGLRKSGEEFPVEYSVGRWREAGRNFFSV 350 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 RD S +E+ R L AV+ V++ + E I N F+++ GY E G + Sbjct: 351 AARDISKRKQSEEKLRHLSQAVEQSPADVVITNAEGIIQYVNPRFSQVTGYASKEVIGKK 410 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 P +L PA L + + + E + + G W A ISP+ D + + Sbjct: 411 PS-ILKSGRTPAALYDSLWETISAGKEWRGELMNRKKDGSLFWQHAIISPIRDNSGVITH 469 Query: 241 LVMTFSDITEERQIRQLEGNIL 262 + DI+ ++ + Sbjct: 470 YISVKEDISIRKEYEERLVRQA 491 Score = 124 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 54/388 (13%), Positives = 110/388 (28%), Gaps = 53/388 (13%) Query: 24 GAVLINENDEVMFFNPAAEKLWGYKREEVI-GNNIDMLI-----PRDLRPAHPEYIRHNR 77 G + + + +++FN KL+ + G + I + E R Sbjct: 2 GISVFDADLNMVYFNTQFLKLYKFPPGLAQPGTPFETFIRYNAEHGEYGDCDIETEVRFR 61 Query: 78 EGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEM----AQKE 133 + E + E DG S + G ++ D S +E Sbjct: 62 VERARKFEAHTVERT--TPDGRV--LEIQGSPLPGGG---FITTYTDISERRNAEVRLRE 114 Query: 134 QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYC-ISEASGMQPDTLLNIPEFPA 192 + V+ ++V IV NR M G ++ G +++ Sbjct: 115 SEERFRRLVELAPDAILV-HQGGTIVYANRQAQIMMGAPTPTDLIGRSIIEIIDPACHD- 172 Query: 193 DNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER 252 RL+ L E L+ G ++ +++++ + + + DI+ + Sbjct: 173 LVAKRLKLLARGEQLPLVEMRLVRLDGGQVEVESTMG--MTTYGGHRAMQSVWRDISARK 230 Query: 253 QIRQLEG----NILAAMCSSPPFHEMGEIICRNI------ESVLNESHVSLFALRNGMPI 302 Q + LA S+P + R + E+V + I Sbjct: 231 QAEAASQAAKDHFLAFARSTPDALIAFDEEGRIVSWNEGAEAVYGFRQDEILGSPLSRLI 290 Query: 303 HWASSSH------------GAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIER 350 + G + A ++ G + F Sbjct: 291 PERYHAINAAWVKRMAKDRGRHNFTGKPIEAHGLRKSGEEFPVEYSVGRWREAGRNFFSV 350 Query: 351 -VADISQHMAALALEQEKSRQHIEQLIQ 377 DIS+ +++S + + L Q Sbjct: 351 AARDISK--------RKQSEEKLRHLSQ 370 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 910 bits (2352), Expect = 0.0, Method: Composition-based stats. Identities = 192/834 (23%), Positives = 351/834 (42%), Gaps = 50/834 (5%) Query: 1 MKLTDADNAADGIFFPALEQ---NMMGAVLINENDEVMFFNPAAEKLWGYKREEV-IGNN 56 ++ + L G +I+ ++++ N A ++ GY ++ +G++ Sbjct: 300 IRSEARLKEQLDTYDALLHAQADVNEGVAIIHR-GKIVYGNDALWRIGGYSPGDIPLGSD 358 Query: 57 IDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV 116 LI R E + + E K+G I A ++ + Sbjct: 359 FFSLIHPSDRKRVSEIYQQRLQDMDVP---TRYEALGLGKNGRAIHIEIAAAQYRDD-SQ 414 Query: 117 YYLALVRDASVEMAQKEQT----RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYC 172 + L+ D S + + + V+ + V P ++ + GY Sbjct: 415 RIVTLIIDISSRKKAEAELVKSQQDYRELVESVQAIVWRAIPGGKFTFVSKEAEALLGYP 474 Query: 173 ISEAS---GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASIS 229 +++ + G D + R + L K ++ ++ G +W+K + Sbjct: 475 LAQWTTDPGFWVDKIHPDDRDWVVEYCRTESL--KLQSFDFDYRMIAADGRVVWMKDIVK 532 Query: 230 PVYDVLA-HLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNI 282 + ++ LV DIT + ++ + + + + Sbjct: 533 VIPNMSNTRPAELVGVMLDITASKAAEADLRLARQVFDNTAEGIVITDPAFRVLEVNQAY 592 Query: 283 ESVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQ 335 + + + ++ G+ ++ W I R++ G Sbjct: 593 QQITGYDKEEIIGKLPSVMQAGLHEAAYYEGIWQTLRREGQWVGEIWNRRKSGESYPEWL 652 Query: 336 IKT---SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHN 392 + + ++ DI+Q ++ S + ++ L D +T LPNR L Sbjct: 653 SISQVADAKGSVQNYVAVFTDITQ--------RKLSEERLQFLANHDALTHLPNRALLQE 704 Query: 393 YLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLC 448 +D + +A V I +D + + D+LG+ D L E R +E L+ + Sbjct: 705 RIDQALFRAQRNKTAIAVLFIDLDRFKIINDTLGHQTGDMLLQEAAKRLKECLRETDTVA 764 Query: 449 RIEGTQFVLVSLEN-DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNR 505 R G +FV++ + D + IA ++ +++P ++ + ++ SIGIS D G + Sbjct: 765 RQGGDEFVVLVEDCGDTDYLNTIARKIMATLAQPFILVGRELFISASIGISVYPDDGLDT 824 Query: 506 DYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQI 565 LL A AM +++G N ++F++ N E L L L+ A+ N+ L YQP++ Sbjct: 825 ASLLKHADAAMYRAKESGKNTFRFYAAEANTNSVELLTLENNLRRAVERNEFVLHYQPKV 884 Query: 566 FAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ 625 + ++ G EA+ RW P G + P +FIPLAEE G I +IG W++ E+CRQ EW+ Sbjct: 885 DLRSQKIIGAEAVVRWQHPELGMLSPMQFIPLAEETGLIIDIGAWIMRESCRQAVEWQQL 944 Query: 626 NIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQ 685 ++VNLSA FR L ++DA+ G+ L +EITESM+M + + +Q Sbjct: 945 TGQNVRVAVNLSARQFRDETLRQTIADALTESGLTPDCLELEITESMIMHNAERAREVLQ 1004 Query: 686 ILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQ 745 D+G + +DDFGTG+S L P+ +KID+SFV + +A+ +AI ++ Sbjct: 1005 HFHDLGAHVLIDDFGTGYSSFGYLKHFPIDSLKIDRSFVRDIPDDVDDMAITQAIIAMAH 1064 Query: 746 SLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI 799 SL + VVAEGVET+EQ L+K C IQG+ FS PL + + + L++ Sbjct: 1065 SLQIKVVAEGVETQEQLAFLKKQGCDQIQGFLFSEPLHSHDFVRMLKLQPMLRL 1118 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 900 bits (2326), Expect = 0.0, Method: Composition-based stats. Identities = 213/825 (25%), Positives = 367/825 (44%), Gaps = 42/825 (5%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINEND-EVMFFNPAAEKLWGYKREEVIGNNIDM 59 +++ + +D F EQ+ + + + + + N AA + +GY E + + Sbjct: 214 LRVARTLHRSDERFRGLFEQHPVPMYIFDRDTLRFLAVNAAAVQQYGYSESEFLAMTVRA 273 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL 119 + P +++ + + M+ +KDGS+I + ++ G+ Sbjct: 274 IRPHSEVARLETHLQRS-DVTPGGPRTMAGVWHHRRKDGSQISADISYHAMTFMGRPALF 332 Query: 120 ALVRDASVE----MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYC-IS 174 L D + + + + L +D++ + + D E + CN AF G Sbjct: 333 VLADDVTEQINAEAEAQRSNQMLETVIDNIPQRIFWKDKELRYLGCNMAFARDAGLAYPE 392 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 + G + + + A R +L + E L+ G S P D Sbjct: 393 QVIGKRDEDMPWRAFAEALGRQDTDVMLSGVPKMNYETDLV-IDGVHRTTVTSKLPFTDS 451 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE---------IICRNIESV 285 + ++ +++DITE ++ A+ +S + E + + + Sbjct: 452 DGRVIGVLGSYTDITERKRADLALRLQSRALDASVNAILITEPSKEGNLIEYVNPAFKRI 511 Query: 286 LNESHVSLFALRNGMPIHWASSSHG-----AEIQNAQSWSATIR--QRDGAPAG---ILQ 335 + + G + + SA +R ++DGA + Sbjct: 512 TGYDPQEVIGQDCRLLQRDDRDQEGIAAIRQALAANREVSAVLRNYRKDGALFWNQLYIA 571 Query: 336 IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLD 395 + +T+ I + D++ + + ++ +E +D +T LPNRN L + L Sbjct: 572 PVPDADGQTTHHIAVINDVTALI--------RYQEQLEYQANYDSLTRLPNRNLLRDRLQ 623 Query: 396 DLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIE 451 + A V I +D ++V DSLG++ D+ L V +R + + R Sbjct: 624 HALIVAQRHHKGVAVVFIDLDGFKNVNDSLGHSVGDRLLSVVADRLARCARASDTVARHG 683 Query: 452 GTQFVLVSLEN-DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYL 508 G +FV+V + D ++ + +R +S+P+ +D + S+G S G + + L Sbjct: 684 GDEFVIVMTDTVDEQSLIAWMERVRASISEPVWLDGTELYVGCSMGASLFPQDGDDAETL 743 Query: 509 LSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAE 568 + A AM + G N +QF+ P MN RL L L+ A+ +N+ L YQPQ+ E Sbjct: 744 MKKADLAMYRAKDMGRNTFQFYQPEMNVSAGARLNLERRLRRALRDNEFLLHYQPQVDIE 803 Query: 569 TGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIH 628 TG++ G+EAL RWHDP G +PPS+FIP+AEE G I + WV+ EACRQ W+ + + Sbjct: 804 TGQVVGMEALVRWHDPEVGLIPPSQFIPVAEESGLIGPLSEWVLREACRQNKAWQDEGLP 863 Query: 629 IPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILR 688 +SVNLSA F+ + V + G+D L +E+TES +M + E + L Sbjct: 864 PARVSVNLSARQFQQRDIAKLVMQVLEETGLDPQYLELELTESTIMRNAEEAVSMLNELH 923 Query: 689 DMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLN 748 +G+GL++DDFGTG+S LS L PV +KID+SFV + AI ++ SLN Sbjct: 924 ALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGESSDDETITSAIIALAHSLN 983 Query: 749 LTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 L V+AEGVET Q + L++ C +QGYFF++PLP IPG + Sbjct: 984 LQVIAEGVETSTQLDFLKERACDEMQGYFFAKPLPHHAIPGMLQR 1028 Score = 72.3 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 45/364 (12%), Positives = 93/364 (25%), Gaps = 50/364 (13%) Query: 38 NPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKD 97 + A Y R +G +D L AH E +R + S +D Sbjct: 137 SRAWAAQT-YTR---LGMEVDRL------EAHMEQLRAQEDRALKAALDASM------RD 180 Query: 98 GSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQK------EQTRQLIIAVDHLDRPVIV 151 ++ ++ G + Y R+ + + + P+ + Sbjct: 181 SRYAMLFLVVTMLAGSGLLIYTFGARENVAREKLRVARTLHRSDERFRGLFEQHPVPMYI 240 Query: 152 LDPER-HIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTAR--D 208 D + + N A + +GY SE M + E + + Sbjct: 241 FDRDTLRFLAVNAAAVQQYGYSESEFLAMTVRAIRPHSEVARLETHLQRSDVTPGGPRTM 300 Query: 209 QDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSS 268 + + G +I S + + V D+TE+ + + Sbjct: 301 AGVWHHRRKDGSQISADISYHAMTFM-GRPALFV-LADDVTEQINAEAEAQRSNQMLETV 358 Query: 269 PPF----HEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNA-------- 316 + R + + + + A + A Sbjct: 359 IDNIPQRIFWKDKELRYLGCNMAFARDAGLAYPEQVIGKRDEDMPWRAFAEALGRQDTDV 418 Query: 317 -------QSWSATIRQRDGAPAGILQIK---TSSGAETSAFIERVADISQHMAALALEQE 366 ++ + DG + K T S + DI++ A + Sbjct: 419 MLSGVPKMNYETDLV-IDGVHRTTVTSKLPFTDSDGRVIGVLGSYTDITERKRADLALRL 477 Query: 367 KSRQ 370 +SR Sbjct: 478 QSRA 481 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 897 bits (2320), Expect = 0.0, Method: Composition-based stats. Identities = 193/814 (23%), Positives = 335/814 (41%), Gaps = 45/814 (5%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 T AD D + ++ +E + N A E G + E+IG L Sbjct: 11 TVADEGEDSLLRALIDVIPDLVFFKDEAGRYLGCNRAFEAYTGRREAELIGYTDRDLFDL 70 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAE--GKVYYLAL 121 ++ Y G++ E + DG ++ + G+ + + Sbjct: 71 STADSYRGYDNAVLASGRSS----RNEEWIVYPDGRRVLVDTLKTPFRDAASGRRGVVGI 126 Query: 122 VRDASVEMAQKEQTRQLIIAVDHLDR----PVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 RD +V E R+ ++ +D + + +FG Sbjct: 127 SRDVTVFRETAEALRRSQENLERAQAVARTGSWYVDFVSGQMDWSAETCRLFGQAPGCVP 186 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 + + PE A +Q + + D +++ GE W+ Sbjct: 187 SYELFLSVVHPEDQALVEAAWRQAVARGDYDLTHRVIV--GGEVRWVHERAEFRRAADGA 244 Query: 238 LQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESHV 291 + T DIT+ + Q ++ + + + R + Sbjct: 245 ALAGIGTVQDITDRKLAEQSLRQAATVFENTGEGVIIADAKNRIIAVNRAFTVITGYGPE 304 Query: 292 SLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG---ILQIKTSSG 341 + LR+G + + A W I R+++G L + Sbjct: 305 EVIGRSPNLLRSGRHDAAYYDAMWRGVHEAGHWQGEIWNRRKNGEIFPELLTLSVVRDHN 364 Query: 342 AETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA 401 + S ++ +DIS+ +++ +++L +D +T LPNR L+ L V++ Sbjct: 365 GKVSHYVGVFSDISRM--------KETEARLQRLAHYDALTDLPNRVLLNLRLAHGVERV 416 Query: 402 VS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVL 457 V + +D ++V DSLG+ D+ L+E+ R R +++ + L R+ G +FV+ Sbjct: 417 QRSGEMLAVLFLDIDRFKNVNDSLGHPVGDELLIEIARRLRSRIRAEDTLARLGGDEFVI 476 Query: 458 VSL-ENDVSNITQIADELRNVVSKPIMI-DDKPFPLTLSIGISYD--LGKNRDYLLSTAH 513 + +++ A E+ +++++ + + + SIGIS + L+S A Sbjct: 477 LLDRIRSANDVADFAQEIIDLLNQSFQLASGQEVFVGASIGISLYPLDTDDATQLISNAD 536 Query: 514 NAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELY 573 A+ ++ G N ++F++ + ERL L AAL+ + + L +QP + + GE+ Sbjct: 537 AALYQAKEAGRNVYRFYTADLTRAAHERLGLEAALRRGLERGEFVLHFQPVVALDKGEVV 596 Query: 574 GIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALS 633 G EAL RW+ P G + P RFIPLAEE G I +G WV+ ACRQ EW ++ Sbjct: 597 GAEALVRWNHPTEGMIAPLRFIPLAEETGLIVPLGEWVLESACRQGREWLDCG-RPLTIA 655 Query: 634 VNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVG 693 VNLS FR+ L V D + G L +EITES +ME + L+ +GV Sbjct: 656 VNLSTRQFRAGDLTATVRDILDRTGFPAALLELEITESTVMEDADRAVATLAALKGLGVR 715 Query: 694 LSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVA 753 LS+DDFGTG+S L+ L V +KID+SFV ++ ++ + ++ + L V+A Sbjct: 716 LSIDDFGTGYSSLAYLKRFAVDALKIDRSFVRDIADDENDRMIVATVVAMAHQMRLGVIA 775 Query: 754 EGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 EGVET EQ LR + C QGY RP A + Sbjct: 776 EGVETAEQLAFLRSLGCEAYQGYLVGRPQAAADF 809 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 88/264 (33%), Gaps = 8/264 (3%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + +A + A G+ ++ M ++ +L+G V L Sbjct: 135 ETAEALRRSQENLERAQAVARTGSWYVDFVSGQMDWSAETCRLFGQAPGCV---PSYELF 191 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFAL--SKVSAEGKVYYL 119 + P + AR + ++ G W + + + + Sbjct: 192 LSVVHPEDQALVEAAWRQAVARGD-YDLTHRVI-VGGEVRWVHERAEFRRAADGAALAGI 249 Query: 120 ALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 V+D + ++ RQ ++ VI+ D + I+ NRAFT + GY E G Sbjct: 250 GTVQDITDRKLAEQSLRQAATVFENTGEGVIIADAKNRIIAVNRAFTVITGYGPEEVIGR 309 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 P LL A + + + + Q E + GE ++S V D + Sbjct: 310 SP-NLLRSGRHDAAYYDAMWRGVHEAGHWQGEIWNRRKNGEIFPELLTLSVVRDHNGKVS 368 Query: 240 NLVMTFSDITEERQIRQLEGNILA 263 + V FSDI+ ++ + Sbjct: 369 HYVGVFSDISRMKETEARLQRLAH 392 Score = 99.7 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 87/270 (32%), Gaps = 28/270 (10%) Query: 127 VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 +A + + L +D + V D + CNRAF G +E G L + Sbjct: 10 ETVADEGEDSLLRALIDVIPDLVFFKDEAGRYLGCNRAFEAYTGRREAELIGYTDRDLFD 69 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 + + R +L ++E ++ G ++ + +P D + + +V Sbjct: 70 LSTADS-YRGYDNAVLASGRSSRNEEWIVYPDGRRVLVDTLKTPFRDAASGRRGVVGISR 128 Query: 247 DITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVS--LFALRNGM---- 300 D+T R+ + + + G + ++ S + LF G Sbjct: 129 DVTVFRETAEALRRSQENLERAQAVARTGSWYVDFVSGQMDWSAETCRLFGQAPGCVPSY 188 Query: 301 PIHWASSSHGAEIQNAQSWSATIRQRD----------GAPAGI---LQIKTSSGAETSAF 347 + + + +W + + D G + + + ++ A Sbjct: 189 ELFLSVVHPEDQALVEAAWRQAVARGDYDLTHRVIVGGEVRWVHERAEFRRAADGAALAG 248 Query: 348 IERVADISQHMAALALEQEKSRQHIEQLIQ 377 I V DI+ +++ + Q + Q Sbjct: 249 IGTVQDIT--------DRKLAEQSLRQAAT 270 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 895 bits (2314), Expect = 0.0, Method: Composition-based stats. Identities = 202/828 (24%), Positives = 345/828 (41%), Gaps = 58/828 (7%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINE--------NDEVMFFNPAAEKLWGYKREEVI 53 + A A + + + + G + E + NPA K G K +V+ Sbjct: 534 QTELALRAKEATYRSLFDNMLNGVAHYRMIFRDGAPVDYEFIAVNPAFGKTTGLK--DVV 591 Query: 54 GNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAE 113 G + +IP + L K W F+ + + Sbjct: 592 GRKVSEVIPGYCEANQDSLQVFGKVAQTGEACHWEHYLSALGK-----WFSFS---IYSP 643 Query: 114 GKVYYLALVRDASVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERH-IVQCNRAFTEM 168 ++ + D + + R + ++ +++ D + N A M Sbjct: 644 APGEFVVVSEDITERKQAETALRDSEDRFRSIFNNAIDGILLADSGTRKFIMGNSAIARM 703 Query: 169 FGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASI 228 GY E + + + + + + ++ + ++ + G + Sbjct: 704 LGYSNEELLQLGTEDI-HPEQDKEYYIAQFAMMVRGESTLSSNAVVKRKDGSVFYADIKA 762 Query: 229 SPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIIC------RNI 282 SP+ + L+ F DITE +Q A SS + ++ + Sbjct: 763 SPLR--IGDKVYLMGFFRDITERKQTEDALRQGAAVFESSHNGIIITDLDGHILAANQAY 820 Query: 283 ESVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGIL- 334 + + L L +G A I+ A SW + R+++G Sbjct: 821 ADISGYTESELLGQNPRILNSGRQSRDFYRKMWANIKEAGSWQGELWNRRKNGEIYPTWL 880 Query: 335 --QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHN 392 + + + ++ +D+SQ ++ E L +DP+T LPNR L + Sbjct: 881 AVSAVRNDQGKATHYVGISSDLSQ--------LRQTEAEREHLAHYDPLTDLPNRLLLRS 932 Query: 393 YLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLC 448 +L + +A V + +D +++ DSLGY D+ L+ + R ++ + L Sbjct: 933 HLTHALAQAKRHHNQVGVLYLDLDRFKNINDSLGYQVGDELLVTLTERLTMHMRSEDLLA 992 Query: 449 RIEGTQFVLVSL-ENDVSNITQIADELRNVVSKPIMIDD-KPFPLTLSIGISYD--LGKN 504 R+ G +F+LV N+ + +A L +++P ++ + + SIGIS G + Sbjct: 993 RLGGDEFLLVLEHINEPEDSAIVARSLLETLAQPFVLHGEREIFIGASIGISIFPNDGDS 1052 Query: 505 RDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQ 564 + L+ A AM + G N + F++ ++ E L L L+ AI+ NQL++ YQPQ Sbjct: 1053 AEQLIQHADAAMHQAKTLGRNTYHFYTEDLSRASNEHLELENRLRHAITANQLRVYYQPQ 1112 Query: 565 IFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRS 624 + TG + G EAL RW DP G V P +FIPLAEE G I IG WV+ E C Q W Sbjct: 1113 VDIATGHIIGAEALVRWQDPERGLVQPGQFIPLAEETGLIGAIGEWVLKETCLQGMRWID 1172 Query: 625 QNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRI 684 + L+VNLS F + +S + G +L +E+TES +M+ ++ K + Sbjct: 1173 AGLPFLTLAVNLSPHQFLRGNIAGLISKVLAETGFPADRLELELTESALMQQGEDVIKML 1232 Query: 685 QILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIG 744 +LR + L++DDFGTG+S LS L P+ +KIDKSFVD + + + I ++G Sbjct: 1233 HLLRAQDIRLAIDDFGTGYSSLSYLKRFPLDILKIDKSFVDDIPFHQDDMEIAATIIAMG 1292 Query: 745 QSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 L V+AEGVET+EQ E L+ C + QGY S P+PAEE + Sbjct: 1293 HILGFKVLAEGVETREQLEFLQARGCDLYQGYLTSPPIPAEEFEKLLK 1340 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 63/414 (15%), Positives = 127/414 (30%), Gaps = 62/414 (14%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINEND-EVMFFNPAAEKLWGYKREEVIGNNIDM 59 M+L + + D + +G + + ++ N + GY R++++ Sbjct: 405 MELANRSSEQDKQLKLFYDLPFIGMAITSPATKRWVYANDRLCDMLGYSRDDLLKTAWID 464 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFAL--SKVSAEGKVY 117 L D + + G +G + E + +KDGS I + ++ + Sbjct: 465 LTHPDDVAGNLKEFERMVAG---ETDGFNIEKRFIRKDGSPITVNLDVKCTRRADGKPDL 521 Query: 118 YLALVRDASVEMAQKEQTR----QLIIAVDHLDRPVIVLDP--------ERHIVQCNRAF 165 +ALV D + + R D++ V + + N AF Sbjct: 522 IVALVDDITQRKQTELALRAKEATYRSLFDNMLNGVAHYRMIFRDGAPVDYEFIAVNPAF 581 Query: 166 TEMFGYCISEASGMQPDTLLNI-PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWI 224 + G + G + ++ E D+ ++ E L+ G+ W Sbjct: 582 GKTTGL--KDVVGRKVSEVIPGYCEANQDSLQVFGKVAQTGEACHWE-HYLSALGK--WF 636 Query: 225 KASI-SPVYDVLAHLQNLVMTFSDITEERQIRQLEG----NILAAMCSSPPFHEMGE--- 276 SI SP V+ DITE +Q + ++ + + Sbjct: 637 SFSIYSP------APGEFVVVSEDITERKQAETALRDSEDRFRSIFNNAIDGILLADSGT 690 Query: 277 ----IICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSAT--------IR 324 + I +L S+ L L IH Q A ++ Sbjct: 691 RKFIMGNSAIARMLGYSNEELLQL-GTEDIHPEQDKEYYIAQFAMMVRGESTLSSNAVVK 749 Query: 325 QRDGAPAG--ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLI 376 ++DG+ I G + + DI+ E++++ + Q Sbjct: 750 RKDGSVFYADIKASPLRIGDKV-YLMGFFRDIT--------ERKQTEDALRQGA 794 Score = 99.7 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 40/350 (11%), Positives = 87/350 (24%), Gaps = 51/350 (14%) Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEK------KDGSKIWTRFALSKVSAEGK 115 P+ L IR ++++ + W + Sbjct: 330 PQTLEGVDYRGIRVLAATRPIPGTDWHLVAKVDRDEVMALPNEMIFWLGLVAILIVFVVT 389 Query: 116 VYYLALVRDASVEMAQK------EQTRQLIIAVDHLDRPVIVLDPER-HIVQCNRAFTEM 168 + + R + EQ +QL + D + + P V N +M Sbjct: 390 SAVMLIWRQQQRLHRMELANRSSEQDKQLKLFYDLPFIGMAITSPATKRWVYANDRLCDM 449 Query: 169 FGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASI 228 GY + L + + + + + + +T E + + G I + + Sbjct: 450 LGYSRDDLLKTAWIDLTHPDDVAGNLKEFERMVAGETDGFNIEKRFIRKDGSPITVNLDV 509 Query: 229 SPVYDVLAHLQNLVMTFSDITEERQIRQLEG----NILAAMCSSPPFHEMGEIICR---- 280 +V DIT+ +Q + + +I R Sbjct: 510 KCTRRADGKPDLIVALVDDITQRKQTELALRAKEATYRSLFDNMLNGVAHYRMIFRDGAP 569 Query: 281 ----------------NIESVLNESHVSLF-ALRNGMPIHWASSSHGAEIQNAQSWSATI 323 ++ V+ + A+ A W Sbjct: 570 VDYEFIAVNPAFGKTTGLKDVVGRKVSEVIPGYCEANQDSLQVFGKVAQTGEACHWEH-Y 628 Query: 324 RQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIE 373 G I + + E F+ DI+ E++++ + Sbjct: 629 LSALGKWFS-FSIYSPAPGE---FVVVSEDIT--------ERKQAETALR 666 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 895 bits (2313), Expect = 0.0, Method: Composition-based stats. Identities = 226/824 (27%), Positives = 346/824 (41%), Gaps = 39/824 (4%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 K + + LE V+++ + FN A E L Y EV G + I Sbjct: 396 KRSRELRELSALQGAILEHAGALVVVLDREGRIRRFNRACEALTQYSFSEVEGRQVWDFI 455 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV-YYLA 120 P + R + + + + G ++ A+GKV + +A Sbjct: 456 PPEERRIVQDEAFAVLFNDPEQSRSTLTNHWVARDGGRRLIEWSNSVLHDAQGKVEFVVA 515 Query: 121 LVRDASVEMAQK----EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 + D + +M + E +L A LD + + +F A Sbjct: 516 VGNDVTDKMRAEAALKESESRLKEAQRIAQVGSWALDLVTGKLIWSDEMFRIFE-TDEAA 574 Query: 177 SGMQPDTLLN--IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 G + L+ PE + LL G W+ Y Sbjct: 575 FGQSYEAFLDALHPEDREHVNKAYMHSVTNHTPYDLVHRLLLPDGRVKWLHGRGETRYGK 634 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNILAAMC---SSPPFHEMGEIICRNIESVLNESHV 291 T DIT ++ + + + I + N + Sbjct: 635 NGDPIASCGTVQDITARKKQEDALRLYASIFEHSGEAILIADQARHIIAVNPAFTNLTGY 694 Query: 292 SLFALRNGMPIHWA--------SSSHGAEIQNAQSWSATI--RQRDGAPAGIL---QIKT 338 +L +R P A S A ++ W I R++DG + Sbjct: 695 ALDDIRGEEPTILAGGQASEESYRSTWASLEQTGYWQGEIIDRRKDGTLYPKWMAVSVVR 754 Query: 339 SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV 398 + + ++ DI+ E++ + I+ L DP+TGL NR +L LD + Sbjct: 755 DADGVLTHYVASFTDIT--------ERKLAEAQIKHLAYHDPLTGLSNRFSLQTQLDQTL 806 Query: 399 DKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQ 454 A V + +D + + DSLG+A DQ L+EV R R+ ++ + R+ G + Sbjct: 807 ALARREQRTLAVVFLDLDRFKSINDSLGHALGDQLLVEVARRLRDNVRDSDIVARLGGDE 866 Query: 455 FVLVSLEN-DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLST 511 FV+V E D + ++AD+L + I T SIGIS G + D L+ Sbjct: 867 FVVVLTEVGDAAGAARVADKLLGALVPRYRIGGHALHTTASIGISLYPHDGDDADALMKN 926 Query: 512 AHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGE 571 A AM + + G + QFF+P MN+ V +RL L+ A+ Q +L YQPQI + +G Sbjct: 927 ADTAMYHAKSQGRDNVQFFTPEMNQSVLKRLQFDHDLRVAVEAGQFELHYQPQINSTSGR 986 Query: 572 LYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPA 631 + +EAL RW P G V P+ FIP+AEE G I +G WV+ EACRQL WR I Sbjct: 987 VVKVEALVRWQHPREGLVSPAEFIPIAEETGLILPLGEWVLNEACRQLRLWRDAGITDLT 1046 Query: 632 LSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMG 691 ++VNLSA S L V+ + G++G L +EITES+ M T ++Q LRD+G Sbjct: 1047 VAVNLSAHQLHSPALIPMVARTLGNHGLEGADLCLEITESVAMRDTTASIAQLQALRDLG 1106 Query: 692 VGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTV 751 + LS+DDFGTG+S LS L LP+ +K+D+SFV +A+ A ++ SL L V Sbjct: 1107 IHLSIDDFGTGYSSLSYLKLLPIDTLKLDQSFVCEIEFNPSDVAICAATIALAHSLGLEV 1166 Query: 752 VAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 VAEG+ET+ Q +L C +QGY FS PLPAE ++ Sbjct: 1167 VAEGIETETQRRLLASHRCDFMQGYLFSAPLPAERALAYIREQQ 1210 Score = 160 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 94/262 (35%), Gaps = 5/262 (1%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 M+ A ++ A +G+ ++ + ++ +++ E G + + Sbjct: 524 MRAEAALKESESRLKEAQRIAQVGSWALDLVTGKLIWSDEMFRIF-ETDEAAFGQSYEAF 582 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFAL--SKVSAEGKVYY 118 + L P E++ +L DG W + Sbjct: 583 LD-ALHPEDREHVNKAYMHSVTNHTPYDLVHRLLLPDGRVKWLHGRGETRYGKNGDPIAS 641 Query: 119 LALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 V+D + Q++ R +H +++ D RHI+ N AFT + GY + + G Sbjct: 642 CGTVQDITARKKQEDALRLYASIFEHSGEAILIADQARHIIAVNPAFTNLTGYALDDIRG 701 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 +P T+L + ++ L +T Q E + + G ++S V D L Sbjct: 702 EEP-TILAGGQASEESYRSTWASLEQTGYWQGEIIDRRKDGTLYPKWMAVSVVRDADGVL 760 Query: 239 QNLVMTFSDITEERQIRQLEGN 260 + V +F+DITE + + Sbjct: 761 THYVASFTDITERKLAEAQIKH 782 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 893 bits (2310), Expect = 0.0, Method: Composition-based stats. Identities = 204/819 (24%), Positives = 351/819 (42%), Gaps = 40/819 (4%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 +L +F A +G+ + ++ AA +L G E + Sbjct: 71 QLLVQLRRNQALFQEAQLSAQLGSWEYDSARREFLWSGAARQLLGLPASET--RTERGTL 128 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFAL-SKVSAEGKVYYLA 120 + + + + A G S E + +W R + E L Sbjct: 129 LQRVAAGDRARVATVLDAMLAEGSG-SVEFCRAGTGAAPVWLRLHYQVHLDEEAPGLVLG 187 Query: 121 LVRDASVEMA----QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 +++D SV+ A +E+ + + + L + H ++ N+ ++ GY E Sbjct: 188 VLQDISVQKAQDDALREREQLFRGTFEQAAVGIAHLGLDGHWIRVNQRLCDILGYSREEL 247 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 + + + + +D + + L + E R G+ +W + + + D Sbjct: 248 LRLTLQDITHPADQDSDLVMTRRLLSGEIPSFSIEKRYRQRRGQLVWANLTAALMRDEGG 307 Query: 237 HLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESH 290 + ++ DI+ +Q + + L S + + + + Sbjct: 308 RPEYFILVVEDISARKQSEEAQQLALTVFDSMLEGVIITDHHRRILAVNAAFGEITRYPV 367 Query: 291 VSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGIL---QIKTSS 340 +L R ++ + W + R+RDG P + Sbjct: 368 EALLGRTPPLWRTAHQDAAFYRRIWRQLLASGRWEGELWHRKRDGTPFPLWLSISCVRDE 427 Query: 341 GAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDK 400 ++ DISQ + S++ +E+L +DP+TGLPNR+ L+ +++ Sbjct: 428 QGRPRQYVFVFNDISQ--------LKDSQEQLERLAHYDPLTGLPNRHLALARLEHALER 479 Query: 401 AVSPV----VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFV 456 A V I +D + + DSLG+ D+ L+ + R ++L+ + L R+ G +F+ Sbjct: 480 ARRHAFPLAVMFIDLDRFKTINDSLGHQAGDELLVAIAQRLHQRLRQEDTLARLGGDEFL 539 Query: 457 LVSLENDVSNITQIADELRNVVSKPIMI-DDKPFPLTLSIGISYD--LGKNRDYLLSTAH 513 +V E V + IA L VV +P + SIGIS G++ L+ A Sbjct: 540 VVIEEAPVQQVASIAHALLKVVDQPFGFSGGGEAYVGASIGISLYPGDGRSASELIRNAD 599 Query: 514 NAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELY 573 AM + G N ++F++ ++ ERL + +L+ A+ + L YQP + +G + Sbjct: 600 AAMYLAKAQGSNAYRFYTESLTRAANERLSMETSLRRALRCEEFVLHYQPLVELASGRVL 659 Query: 574 GIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALS 633 G E L RW P VPPSRFIPLAEE G I +G WV+ EACRQ W + + L+ Sbjct: 660 GAEVLVRWQPPGEALVPPSRFIPLAEETGLIVPLGDWVLHEACRQGKAWLDAGLPLL-LA 718 Query: 634 VNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVG 693 VNLS F + L QV A+ G+ QL +E+TE +ME + K + L+ +GV Sbjct: 719 VNLSPRQFLRHDLVGQVRKALQGSGLPPAQLELELTEGALMEQAEQAVKTLHALKRLGVS 778 Query: 694 LSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVA 753 L++DDFGTG+S L+ L P+ ++KID+SFV + ++ I ++ ++L L +A Sbjct: 779 LAIDDFGTGYSSLAYLKRFPLDKLKIDRSFVRDLPRDSSDAEIVTTIIAMVRNLKLEALA 838 Query: 754 EGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 EGVET +Q LR++ C QGY FS PLPAE W+ Sbjct: 839 EGVETPQQLAFLRQLGCDSGQGYLFSPPLPAEAFERWLR 877 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 892 bits (2307), Expect = 0.0, Method: Composition-based stats. Identities = 204/818 (24%), Positives = 357/818 (43%), Gaps = 40/818 (4%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 + F L + L + + N A + G E+IG +P + Sbjct: 275 LQDSLARFEAWLRNSPNVMSLKDLEGRYLLVNRAYSRALGKAPAELIGKKSADFLPPEEA 334 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA-LVRDA 125 A E R ++R + L D + A+G + + D Sbjct: 335 RATAEQDRQVLSALESRQYEQTLTLDGLPGD----FLVTKFPLFDADGLPAGIGCIATDI 390 Query: 126 S----VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 + A++E + ++ + +L + + N EM GY E G + Sbjct: 391 TQNKRERQAKQEAENRYHALIEQSLVGIYIL-QDECLAYVNDKLAEMLGYPGEELQGERI 449 Query: 182 DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNL 241 +T+L E + Q+L + L+ + G+ + ++ + Sbjct: 450 ETVLAHEERQRLRQQITQRLSENISIMHFSARLVRKDGQLLDVEIHSRLF--EYRGRSAI 507 Query: 242 VMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESHVSLFA 295 + DI++ Q + ++ + + + + + Sbjct: 508 IGVVVDISDRVQADANQKLASKVFENAAEGILITGADYRIIAVNQAFTRITGYPPELVIG 567 Query: 296 LRNGMPIH--WASSSHGAEIQNAQSWSATI--RQRDGAPAGI---LQIKTSSGAETSAFI 348 + + S + + W + R+R + + ++ Sbjct: 568 RVSRIFRDNTSWSVAMLDGLARHGHWQGEMLDRRRSHEWYPAELSISAVRDDAGAITNYV 627 Query: 349 ERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNL----HNYLDDLVDKAVSP 404 ADI+ ++++ + ++ L DP+T LPNR+ L + + + Sbjct: 628 GVFADITV--------RKQAEERLQFLANHDPLTRLPNRSWLIACLEDRIQQIASSGQQV 679 Query: 405 VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-ND 463 V + +D + + DS G+ D+ L E +R + + + R+ G +F L+ Sbjct: 680 AVMFLDLDRFKLINDSFGHQTGDELLRETASRLEQVVGGRGQIARLGGDEFTLLVSHFAS 739 Query: 464 VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRK 521 + ++ +A+++ V+++P+ ++ + +T S+GIS G + LL A AM ++ Sbjct: 740 QATLSTLAEDILAVLAQPLWLEGQELIVTGSLGISVYPHDGSDARTLLKNADVAMYRAKE 799 Query: 522 NGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARW 581 G N +QFF+ MN ERL L L++A+ + +L +QP + A T L +E L RW Sbjct: 800 AGKNTYQFFAAEMNAQAIERLQLERGLRQALERGEFELHFQPIVAAATYRLEALEVLLRW 859 Query: 582 HDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHF 641 P G V P RFIPLAEE G I IG WVI +ACRQLAEW +H+P L++NLSA F Sbjct: 860 RHPELGLVSPVRFIPLAEETGLIRPIGDWVIRQACRQLAEWDCLGLHVPRLAINLSARQF 919 Query: 642 RSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGT 701 L QV+ A+ GI +L +E+TESM+M++ +E + L+ +GV LS+DDFGT Sbjct: 920 EQQGLIMQVAGALAEAGIAAGRLELEMTESMVMQNPSEAVSLLGELKALGVRLSIDDFGT 979 Query: 702 GFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQ 761 G+S LS L P+ +KID+SF++ + A+ EAI ++ + L+ +VVAEGVET+ Q Sbjct: 980 GYSSLSYLKRFPLDTLKIDRSFIEGLPGDGDNAAIAEAILAMARKLSFSVVAEGVETEAQ 1039 Query: 762 FEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI 799 L C+++QGY FSRPLPA E+P ++ P + Sbjct: 1040 AAFLCAKGCQLLQGYLFSRPLPAAELPAFLQQRSPQPL 1077 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 97/255 (38%), Gaps = 8/255 (3%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 A A+ + +EQ+++G ++ +++ + + N ++ GY EE+ G I+ ++ + Sbjct: 398 QAKQEAENRYHALIEQSLVGIYIL-QDECLAYVNDKLAEMLGYPGEELQGERIETVLAHE 456 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRD 124 R + + + M +L +KDG + G+ + +V D Sbjct: 457 ERQ---RLRQQITQRLSENISIMHFSARLVRKDGQLLDVEIHSRLFEYRGRSAIIGVVVD 513 Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 S + + ++ +++ + I+ N+AFT + GY G Sbjct: 514 ISDRVQADANQKLASKVFENAAEGILITGADYRIIAVNQAFTRITGYPPELVIGRVSRIF 573 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 + + L + Q E L R+ E + SIS V D + N V Sbjct: 574 ----RDNTSWSVAMLDGLARHGHWQGEMLDRRRSHEWYPAELSISAVRDDAGAITNYVGV 629 Query: 245 FSDITEERQIRQLEG 259 F+DIT +Q + Sbjct: 630 FADITVRKQAEERLQ 644 Score = 107 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 86/258 (33%), Gaps = 21/258 (8%) Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 ++ + + + + + D E + NRA++ G +E G + L Sbjct: 273 RQLQDSLARFEAWLRNSPNVMSLKDLEGRYLLVNRAYSRALGKAPAELIGKKSADFLPPE 332 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 E + +Q+L Q E L T G + P++D + +DI Sbjct: 333 E-ARATAEQDRQVLSALESRQYEQTL-TLDGLPGDFLVTKFPLFDADGLPAGIGCIATDI 390 Query: 249 T----EERQIRQLEGNILAAMCSSPPFHEMGE-----IICRNIESVLNESHVSLFALR-N 298 T E + ++ E A + S + + + + +L L R Sbjct: 391 TQNKRERQAKQEAENRYHALIEQSLVGIYILQDECLAYVNDKLAEMLGYPGEELQGERIE 450 Query: 299 GMPIHWASSSHGAEIQNA-------QSWSATIRQRDGAPAGI-LQIKTSSGAETSAFIER 350 + H +I +SA + ++DG + + + SA I Sbjct: 451 TVLAHEERQRLRQQITQRLSENISIMHFSARLVRKDGQLLDVEIHSRLFEYRGRSAIIGV 510 Query: 351 VADISQHMAALALEQEKS 368 V DIS + A A Q+ + Sbjct: 511 VVDISDRVQADAN-QKLA 527 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 891 bits (2304), Expect = 0.0, Method: Composition-based stats. Identities = 199/819 (24%), Positives = 353/819 (43%), Gaps = 41/819 (5%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 ++ ++ + ++ G + +++ NPA + Y + + I + Sbjct: 426 EESLQVSEQKYRHIVDHAPFGITRTTRDGKLISANPAMANILKYDSSQELLETIGRSSLQ 485 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLAL 121 ++ ++P + L L KDGS R ++S +G Y Sbjct: 486 EVIFSNPADREDMVDKVIISNSWCLHNLSLRCKDGSLATCRVHSRRLSEKGSQNWEYENF 545 Query: 122 VRDASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDP-ERHIVQCNRAFTEMFGYCISEA 176 + D + ++ ++ ++ + ++ + + + + +FGY + Sbjct: 546 LEDITEQLETQQTLQKNKKNIQQLAENTEAVLYEYNLSDNKWTYMAPQVERIFGYKPEDW 605 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 Q L + E+ + G +W++ I D Sbjct: 606 IDNQFWLDRVHEADWGKASREELSKLNQQEAHSIEYRFYKKDGSIVWVRDIIRIESDAEN 665 Query: 237 HLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICR---NIESVLNESHVSL 293 L L DIT+ +Q + A+ SP + + R + +L Sbjct: 666 KL-CLHGLLIDITDSKQSESQLKKLSRAIEQSPVSVVITDPEGRIEYVNPKFTQLTGYTL 724 Query: 294 FALRNGMPIHWASS--------SHGAEIQNAQSWSATI--RQRDGAPAGILQIKT---SS 340 + P S S I + + W + +++DG+ + Sbjct: 725 EEVIAQNPRILKSGNLLPSVYDSLWKTITSGKEWYGELENKRKDGSIFWESASISPLFDE 784 Query: 341 GAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDK 400 + FI DI+Q ++ + + +E + D +TGL NR L+++L+ + + Sbjct: 785 SGKIINFIGVKEDITQ--------RKLNEKRLEYMATHDGLTGLANRTLLYDHLEIALHQ 836 Query: 401 AVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFV 456 + V L+ +D + + DSLG+ DQ L V R ++ ++ + R+ G +FV Sbjct: 837 SQRSKKLVAVILLDLDRFKVINDSLGHLVGDQVLKAVGQRLKQYVRSTDTVARLGGDEFV 896 Query: 457 LVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGKNRD--YLLSTAH 513 ++ + D + +IA L +++P + + ++ S GI N D LL A Sbjct: 897 VLLTDVRDTTAAGKIAHNLLRKLNEPFFLHGRELYVSASFGICLSETDNVDGTILLRNAD 956 Query: 514 NAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELY 573 AM + G + F+S MNE + + L + +L++A+ N+ +L YQP++ TG + Sbjct: 957 IAMYKAKAEGCGLY-FYSHEMNEHLIKTLEMENSLRQALEKNEFQLYYQPKVEHATGRII 1015 Query: 574 GIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALS 633 G EAL RW P G +PPS FIPLAEE G I IG WV+AEACRQ W ++ + ++ Sbjct: 1016 GCEALLRWRHPQRGMIPPSEFIPLAEETGLIVQIGHWVLAEACRQSKIWETEGLPPLTMA 1075 Query: 634 VNLSALHFRSN-QLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGV 692 VN+SA F L V + + QL +E+TESM+M+ + ++ ++ +GV Sbjct: 1076 VNISARQFYQGENLIQAVKSTLERSQLVPSQLELELTESMVMKDAVNAERTMRKIKQLGV 1135 Query: 693 GLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVV 752 LS+DDFGTG+S L+ L S PV +KID+SF+ ++ A+L +I +I +L L V Sbjct: 1136 SLSLDDFGTGYSSLNYLRSFPVDSLKIDRSFILDIASDASSAAILNSIIAIAHTLGLQTV 1195 Query: 753 AEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 AEGVE +Q ++ C IQGY FSRPLP E+ Sbjct: 1196 AEGVENNDQLALVANCGCNYIQGYLFSRPLPPEDFVALF 1234 Score = 80.4 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 36/285 (12%), Positives = 85/285 (29%), Gaps = 37/285 (12%) Query: 117 YYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS-- 174 + L R + E + + ++ VDH + + ++ N A + Y S Sbjct: 416 AWTTLERKLTEE-SLQVSEQKYRHIVDHAPFGITRTTRDGKLISANPAMANILKYDSSQE 474 Query: 175 --EASGM-QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV 231 E G ++ PAD + +++ + L + G + + Sbjct: 475 LLETIGRSSLQEVIFSN--PADREDMVDKVIISNSWCLHNLSLRCKDGSLATCRVHSRRL 532 Query: 232 YDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEM-----------GEIICR 280 + + DITE+ + +Q + E + Sbjct: 533 SEKGSQNWEYENFLEDITEQLETQQTLQKNKKNIQQLAENTEAVLYEYNLSDNKWTYMAP 592 Query: 281 NIESVLNESHVSLFALRNGMPI------HWASSSHGAEIQNAQSWSATIR--QRDGAPAG 332 +E + + + AS +++ ++ S R ++DG+ Sbjct: 593 QVERIFGYKPEDWIDNQFWLDRVHEADWGKASREELSKLNQQEAHSIEYRFYKKDGSIVW 652 Query: 333 ILQIKT--SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQL 375 + I S + DI+ + ++S +++L Sbjct: 653 VRDIIRIESDAENKLCLHGLLIDIT--------DSKQSESQLKKL 689 Score = 74.3 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 65/204 (31%), Gaps = 17/204 (8%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERH--IVQCNRAFTEMFGYCISEASG 178 + +D ++ + + Q + VD+ + E IV ++ ++ FGY E Sbjct: 128 VRQDNTL---LEMELCQANLIVDNSPAVLFHWKAEDGWPIVSVSKNISQ-FGYAQEELMS 183 Query: 179 MQPD--TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 TL++ + Q+ Q E+ ++T+ E W+ D Sbjct: 184 GDFSYATLVHPKDLDRLEEELQAQINRGERIFQTEYRIITKQKEVRWVDERTFVERDAAG 243 Query: 237 HLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFAL 296 + + DI E ++ + + + + +L + AL Sbjct: 244 KVSHYQGFIIDIDERKRTELVMAARMRLLQLATNNTLAQ---------LLEATLDEAEAL 294 Query: 297 RNGMPIHWASSSHGAEIQNAQSWS 320 + + + Q+WS Sbjct: 295 TESRMGFYHFLEDDQKTLSLQAWS 318 Score = 51.1 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 13/137 (9%), Positives = 40/137 (29%), Gaps = 10/137 (7%) Query: 17 ALEQNMMGAVLINEN--DEVMFFNPAAEKLWGYKREEVIGNNID--MLIPRDLRPAHPEY 72 ++ + ++ + + +GY +EE++ + L+ E Sbjct: 145 IVDNSPAVLFHWKAEDGWPIVSVSKNISQ-FGYAQEELMSGDFSYATLVHPKDLDRLEEE 203 Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSKIWTRFA--LSKVSAEGKVYYLALVRDASVEMA 130 ++ G+ + E ++ K W + + +A +Y + D Sbjct: 204 LQAQINRGERIFQT---EYRIITKQKEVRWVDERTFVERDAAGKVSHYQGFIIDIDERKR 260 Query: 131 QKEQTRQLIIAVDHLDR 147 + + + Sbjct: 261 TELVMAARMRLLQLATN 277 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 884 bits (2285), Expect = 0.0, Method: Composition-based stats. Identities = 217/861 (25%), Positives = 376/861 (43%), Gaps = 80/861 (9%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 ++ D +G+ LE+ + G VLIN + NPA +++GY+R+E++G N+ +L+P Sbjct: 11 MSRYDTLNEGVLRAVLEEMVDGVVLINRLGIIREVNPAVTRIFGYERKEMLGANVSLLVP 70 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALV 122 R H +Y+R+ + G+ R+ G+ R + ++KDGS A+S+V A G+ + +V Sbjct: 71 SPDRERHDQYLRNYLQTGEGRIIGVGRTVHGQRKDGSLFPMELAVSEVKAGGEHLFAGIV 130 Query: 123 RDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPER---HIVQCNRAFTEMFGYCISEASGM 179 RD S + A+D + + D + I N AF ++ G + G Sbjct: 131 RDISERHQFHQTLALFRRAMDSAYNGIAIADVDAEGERISYANAAFAQITGIPAVDLLGR 190 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 L E + Q + + G W ++SP+++ + Sbjct: 191 SLTLLACEGEDGQTCTAMVSQ-MRTGGSMRRTLRCQRPDGSLFWNDVTLSPIFNERGEIS 249 Query: 240 NLVMTFSDITEERQIRQLEGN-----ILAAMCSSPPFHEMGEIICRNIES---------- 284 + +D T ++ Q + E+ + R IE Sbjct: 250 QCIAVLADATALKESEQALRRSRDALERQVEARTENLTEVVRQLRREIEERTRVESALRL 309 Query: 285 -----------------------------------------VLNESHVSLFALRNGMPIH 303 + + G Sbjct: 310 SEQRLANAQRIARLGHWEWEIATGRLYWSAEVYNLLGLGPEFTTPDYERFLEMIPGDDRQ 369 Query: 304 WASSSHGAEIQNAQSWS--ATIRQRDGAPAGILQ---IKTSSGAETSAFIERVADISQHM 358 + +++ + I DG+ + + + + DI+ Sbjct: 370 RLQEAIARCLEHGLPYEIDHRITCPDGSERILHEDGELVYDDEGKPLLLRGTAQDIT--- 426 Query: 359 AALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHI 414 E+ + + L FDP+TGLPNR + L + A + + +D Sbjct: 427 -----ERHDYQNRLRHLANFDPVTGLPNRTLFKDRLQHALANATRNQRLVALLFLDMDQF 481 Query: 415 QDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL-ENDVSNITQIADE 473 ++V DSLG+ D+ L + R ++ + R G +F+++ + A+ Sbjct: 482 KNVNDSLGHMMGDELLRQTAERLLGCVREGDTVARFGGDEFIILLENIEHSEQASLSAER 541 Query: 474 LRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFS 531 + + +P + + +SIGIS ++ + L+ A +AM + GG G++F++ Sbjct: 542 VVQAMRRPFRLGEHEHFCNVSIGISLYPEDDEHPEDLVRHADSAMYLAKAQGGAGYRFYT 601 Query: 532 PAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPP 591 P MN ERL+L L +A+ Q ++ YQPQ+ +G + G+EAL RW P G VPP Sbjct: 602 PDMNTRAMERLLLQNQLHQALELGQFQVHYQPQMDLRSGRICGVEALVRWQHPERGLVPP 661 Query: 592 SRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVS 651 + FIP+AE+ G IE +G WV+ A R++ W+ + + LSVNLS FR LP V Sbjct: 662 AEFIPMAEDTGLIEPLGEWVLRTAAREVRGWQDRGLPALNLSVNLSPRQFRHPDLPGMVE 721 Query: 652 DAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVS 711 + G++ +L +EITE +++ + + +GV +S+DDFGTG S L+ L Sbjct: 722 RVLAESGLEAERLELEITERLIIVDLEHTVDTLSRIARLGVRVSIDDFGTGHSSLAYLKR 781 Query: 712 LPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCR 771 LPV +KID+ FVD + A+ EA+ ++G++L L V+AEGVET+EQ LR+ C Sbjct: 782 LPVHALKIDREFVDGIGQDSDDAAIAEAVIALGRTLRLQVIAEGVETREQASFLREHGCD 841 Query: 772 VIQGYFFSRPLPAEEIPGWMS 792 +QG+F +RP+PA E+ GW+S Sbjct: 842 AVQGFFIARPMPAGELTGWLS 862 Score = 60.8 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 56/211 (26%), Gaps = 34/211 (16%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIG--NNIDM 59 ++ A ++ A +G ++++ L G E Sbjct: 302 RVESALRLSEQRLANAQRIARLGHWEWEIATGRLYWSAEVYNLLGLGPEFTTPDYERFLE 361 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VY 117 +IP D R E I E G + ++ DGS+ V + + Sbjct: 362 MIPGDDRQRLQEAIARCLEHGLP----YEIDHRITCPDGSERILHEDGELVYDDEGKPLL 417 Query: 118 YLALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIVQ--------------- 160 +D + + + R L V L + D +H + Sbjct: 418 LRGTAQDITERHDYQNRLRHLANFDPVTGLPNRTLFKDRLQHALANATRNQRLVALLFLD 477 Query: 161 ------CNRAFTEMFGYCISEASGMQPDTLL 185 N + M G E + LL Sbjct: 478 MDQFKNVNDSLGHMMG---DELLRQTAERLL 505 >UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK65_9PROT Length = 1327 Score = 883 bits (2283), Expect = 0.0, Method: Composition-based stats. Identities = 205/842 (24%), Positives = 354/842 (42%), Gaps = 69/842 (8%) Query: 6 ADNAADGIF-------FPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNID 58 A AA+ + M+G + N ++ N E+++GY + G Sbjct: 499 ARRAAEEALVESLWEQQLIFDNAMIGI-SYHRNRMILRCNRRCEEIFGYLEGGLAGQPTR 557 Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKVY 117 +L D E + G A E EL +++DG+ IW + + Sbjct: 558 VLFASD---EAWEAVGRQVYGESASGETFDGELLYQRRDGTPIWVHAIGRTIGESADSET 614 Query: 118 YLALVRDASVEMAQKEQTRQ----------------------LIIAVDHLDRPVIVLDPE 155 ++ D + + A ++ RQ + ++ + PV E Sbjct: 615 WIWAYADVTAQRAAEQALRQSHLELEQRVADRTLELSQQLHFMRQLIEAIPGPVFYKSQE 674 Query: 156 RHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLL 215 + CN+AF E+ G E G + + + +LL + E +L Sbjct: 675 GRYLGCNQAFLELIGKSRDEVVGATVYDV-APADLADRYKAADDELLARLGSQVYEARVL 733 Query: 216 TRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMG 275 G + + + LV DITE +++ SS + Sbjct: 734 DADGHYRDVIFHKATYGKPGENGGGLVGVMLDITERKRMEARLLQAATVFDSSAEGITIT 793 Query: 276 ------EIICRNIESVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI- 323 + R + + + L++G + W + Sbjct: 794 APDGNIIAVNRAFTEITGYTEDEVIGRNPRMLQSGFQDRRFYLDMWQALGTQGRWRGELW 853 Query: 324 -RQRDGAPAG---ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFD 379 R++DG + + + + ++ +DI+ E ++ ++ D Sbjct: 854 NRRKDGQTFLESLTISAVKDAQGKVAHYVGVFSDIT--------ELRRAHDQLDHQAHHD 905 Query: 380 PMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVN 435 P+TGLPNR L + L + +A V+ I +D +++ D+LG+ D+ L EV Sbjct: 906 PLTGLPNRLLLGDRLHKALQRAHRDETGLAVFFIDLDRFKNINDTLGHQVGDRVLCEVAW 965 Query: 436 RFREKLKPDQYLCRIEGTQFVLVSLEN-DVSNITQIADELRNVVSK-PIMIDDKPFPLTL 493 R ++ + R+ G +F++V + + + ++ IA+++ NV+ P+ ++ F + Sbjct: 966 RLGRLMRESDTVGRLGGDEFLIVIEDVGEPTAVSHIAEKILNVLQASPVTVE-HEFFVGA 1024 Query: 494 SIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEA 551 SIGIS G + + L+ A AM ++ G N ++FF+ + + RL + L+ A Sbjct: 1025 SIGISVFPQDGADAETLMKNADVAMYRAKERGRNTYEFFTKDLTQTSLARLQMETDLRRA 1084 Query: 552 ISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWV 611 I +L++ QPQ TG++ G EAL RW P G V P FI LAEE G I IG WV Sbjct: 1085 IERGELRVYLQPQFSLATGKVVGAEALVRWLRPQQGLVLPGEFIKLAEESGLIVPIGEWV 1144 Query: 612 IAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITES 671 A Q A W + + LSVN+S + F ++ + G+ L +EITES Sbjct: 1145 QGTAACQWATWVAAGLAPGVLSVNVSGVEFARGRIQQTARRTLELSGLPARFLELEITES 1204 Query: 672 MMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEK 731 +M H + + LR MG+ L +DDFGTG+S L+ L LP+ ++K+D+SFV + Sbjct: 1205 AIMSHAENSVQVLDNLRAMGISLVIDDFGTGYSSLAYLKRLPLNKLKVDQSFVRGLPNDT 1264 Query: 732 RILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI-PGW 790 A+ A+ ++G SL LTV+AEGVET+ Q E L C +QGY RP+P ++ + Sbjct: 1265 EDCAIARAVIALGHSLQLTVIAEGVETEAQREFLTGEGCDEMQGYLRGRPMPFDDYHARF 1324 Query: 791 MS 792 +S Sbjct: 1325 LS 1326 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 65/395 (16%), Positives = 126/395 (31%), Gaps = 41/395 (10%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 DA + E +G + + + NP+ E+++GY ++IG + Sbjct: 257 MDALLREQTL---IFEAAPIGIAFV-RDRIIQRCNPSLERIFGYSPGQLIGQSTRCFFAS 312 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEG-KVYYLALV 122 + + E+Q K DG IW R S + + L Sbjct: 313 E---EAWREKGERAQLLIDECGSFVGEVQYCKSDGLPIWCRVTGSLANPGEPGDGLVWLF 369 Query: 123 RDASVEMAQ----KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 D + + + R+ + + + L +R I +CN +F +FGY + G Sbjct: 370 EDVTEKRQADRAMEALLREQALIFERAPTGIAFL-RDRVIQRCNPSFERIFGYAPGQLLG 428 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 + R + ++ + E G IW + + S + + Sbjct: 429 QSTRVCFASEAAWREAGERAYAVADESGKFIGELEYCRADGTPIWCQVTGS-LLNPANPA 487 Query: 239 QNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESV-LNESHVSLFALR 297 + V F D+T R + L +G RN + N +F Sbjct: 488 EGYVWLFEDVTARRAAEEALVESLWEQQLIFDNAMIGISYHRNRMILRCNRRCEEIFGYL 547 Query: 298 NG------MPIHWASSSHGAEIQN--------AQSWSATI--RQRDGAPAGILQIKTSSG 341 G + +AS + +++ + ++RDG P + I + G Sbjct: 548 EGGLAGQPTRVLFASDEAWEAVGRQVYGESASGETFDGELLYQRRDGTPIWVHAIGRTIG 607 Query: 342 AETSA--FIERVADISQHMAALALEQEKSRQHIEQ 374 + +I AD++ Q + Q + Q Sbjct: 608 ESADSETWIWAYADVTA--------QRAAEQALRQ 634 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 64/389 (16%), Positives = 134/389 (34%), Gaps = 38/389 (9%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 + L+ + + V + V NP AE+L+G+ ++G + +P D A + + Sbjct: 14 YKAILDHSGIAVVCT-RSRLVYRCNPRAEELFGWPAGTLVGQLDAVFLPDD---ASCDAL 69 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEG-KVYYLALVRDASVEMAQK 132 R + + E +L ++DGS + ++ + +VRD + E+ + Sbjct: 70 RGTVRPQLRVGKIVDLETRLARRDGSTFVAHLIARAIDPAAPRLGTVWIVRDVTQEVLTR 129 Query: 133 EQ----TRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 + R+ + ++ + +++L ER I +CNR F E+ GY E G Sbjct: 130 DTSARLLREQQLIFENAETGIVIL-RERIIQRCNRRFAELLGYAADELVGQSTRLYYPSE 188 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 E + R + +T + + R GE + S + + + V + D+ Sbjct: 189 EAWLETGRRAYAAIAETGIYHGDTIFRRRNGESFCCHITGS-MMNRANPDEGYVWLYEDV 247 Query: 249 TEER----QIRQLEGNILAAMCSSPPFHEMGEII-----CRNIESVLNESHVSLFALRNG 299 +E+R + L ++P ++E + S L Sbjct: 248 SEKRASAAAMDALLREQTLIFEAAPIGIAFVRDRIIQRCNPSLERIFGYSPGQLIGQSTR 307 Query: 300 MPIHWASSSHGAE--------IQNAQSWSATIR--QRDGAPAG--ILQIKTSSGAETSAF 347 +AS E I S+ ++ + DG P + + G Sbjct: 308 C--FFASEEAWREKGERAQLLIDECGSFVGEVQYCKSDGLPIWCRVTGSLANPGEPGDGL 365 Query: 348 IERVADISQHMAALALEQEKSRQHIEQLI 376 + D+++ A + + Sbjct: 366 VWLFEDVTEKRQAD----RAMEALLREQA 390 Score = 94.3 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 66/252 (26%), Gaps = 23/252 (9%) Query: 132 KEQTRQLIIAVDHLDRPVIVLDPERHIVQ-CNRAFTEMFGYCISEASGMQPDTLLNIPEF 190 ++Q + +DH V+ +V CN E+FG+ G L Sbjct: 8 EQQLLEYKAILDHSGIAVVCT--RSRLVYRCNPRAEELFGWPAGTLVGQLDAVFLPDDAS 65 Query: 191 PADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITE 250 R ++ L E L R G + D A V D+T+ Sbjct: 66 CDALRGTVRPQLRVGKIVDLETRLARRDGSTFVAHLIARAI-DPAAPRLGTVWIVRDVTQ 124 Query: 251 ERQIRQL----EGNILAAMCSSPPFHEMGEII-----CRNIESVLNESHVSLFA------ 295 E R ++ + R +L + L Sbjct: 125 EVLTRDTSARLLREQQLIFENAETGIVILRERIIQRCNRRFAELLGYAADELVGQSTRLY 184 Query: 296 LRNGMPIHWASSSHGAEIQNAQSWSAT--IRQRDGAPA--GILQIKTSSGAETSAFIERV 351 + A I + R+R+G I + ++ Sbjct: 185 YPSEEAWLETGRRAYAAIAETGIYHGDTIFRRRNGESFCCHITGSMMNRANPDEGYVWLY 244 Query: 352 ADISQHMAALAL 363 D+S+ A+ A Sbjct: 245 EDVSEKRASAAA 256 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 881 bits (2278), Expect = 0.0, Method: Composition-based stats. Identities = 195/734 (26%), Positives = 320/734 (43%), Gaps = 46/734 (6%) Query: 97 DGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPER 156 DG L+ +A L VE A +E + ++ DP+ Sbjct: 673 DGDVRLLHG-LAASAAVALENSALLAERRQVEQALRESEALKASVLASAACGIVATDPQG 731 Query: 157 HIVQCNRAFTEMFGYCISEASGMQPDTLLN------------IPEFPADNRIRLQQLLWK 204 I N +FGY E G TL + + L+ + Sbjct: 732 LITVFNPGAEAIFGYAAHEVVGKVTPTLWHDAEEIAAAAVALSRDLGCRVEAGFDALVAR 791 Query: 205 ----TARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGN 260 D+ E + + G +I I+ +++ + D L + T DIT ++Q Sbjct: 792 ARCSGQVDERETAGVRKDGRRITIRLAVTVMRDAQGALAGYLGTIVDITAQKQAAAQLNL 851 Query: 261 ILAAMCSSPPFHEMGE------IICRNIESVLNESHVSLFA-----LRNGMPIHWASSSH 309 + + +I + + S V + L +G S Sbjct: 852 AAKVFEQGGEGIAITDAACNIVMINQAFTRITGYSEVEVLGRNPSLLASGRHDQAFYQSM 911 Query: 310 GAEIQNAQSWSATI--RQRDGAPAGILQIKT--SSGAETSAFIERVADISQHMAALALEQ 365 I++ W I R++DG+ + + + +I DI+QH Sbjct: 912 WESIESLGHWQGEIWNRRKDGSVYPEWLLISRVDGDGAPTHYIGTFIDITQH-------- 963 Query: 366 EKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSL 421 +++ I++L FD +TGLPNR+ L + + +A + + +D ++V DSL Sbjct: 964 KEAEASIQRLAHFDALTGLPNRSLLEERVRHDLARAHRGREALALMFVDLDRFKNVNDSL 1023 Query: 422 GYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKP 481 G+ D L++V R R ++ + + R+ G +F++V D +A +L V++ Sbjct: 1024 GHRVGDALLIQVAERLRRAVRDEDTVSRLGGDEFIVVLPSTDADGAAHVAAKLLEVMAPA 1083 Query: 482 IMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVK 539 I+ +LS GI+ G++ + L +A AM +++G N + FF+ M E Sbjct: 1084 YRIEQHELTCSLSAGIAMYPADGESFEALSMSADTAMYRAKQSGRNAYCFFTAEMQERSA 1143 Query: 540 ERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAE 599 L + L+ A+ N +L+L YQPQ L G EAL RW P G V P FIP+AE Sbjct: 1144 RNLQIENDLRRALENGELRLHYQPQFTLADRRLVGAEALLRWQHPQLGMVSPVEFIPIAE 1203 Query: 600 EIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGI 659 E G I IG WV+ A QL W+ + + ++VNLSA+ FR L + VS + A G+ Sbjct: 1204 ECGLILPIGEWVLRAAVSQLRVWQQEGLPPMTVAVNLSAVQFRQASLTDVVSRILDAEGL 1263 Query: 660 DGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKI 719 L +E+TES+ M++ + LR +GV +S+DDFGTG+S +S L V ++KI Sbjct: 1264 AAQFLELELTESVAMDNPLAAIATMDKLRALGVRMSIDDFGTGYSSMSYLKRFRVHKLKI 1323 Query: 720 DKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFS 779 D+SFV + A++ A S+ + L L +AEGVE++ Q LR C QGY FS Sbjct: 1324 DRSFVADLAADPEDEAIVTATISLARDLGLQTIAEGVESEAQLAFLRAKGCDEAQGYLFS 1383 Query: 780 RPLPAEEIPGWMSS 793 RPL + ++ + Sbjct: 1384 RPLAPAQFAAFVRA 1397 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 92/277 (33%), Gaps = 17/277 (6%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 ++ A ++ + L G V + + FNP AE ++GY EV+G L Sbjct: 701 QVEQALRESEALKASVLASAACGIVATDPQGLITVFNPGAEAIFGYAAHEVVGKVTPTLW 760 Query: 62 P-------------RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALS 108 RDL + + RE +KDG +I R A++ Sbjct: 761 HDAEEIAAAAVALSRDLGCRVEAGFDALVARARCSGQVDERETAGVRKDGRRITIRLAVT 820 Query: 109 KVSAEGK--VYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFT 166 + YL + D + + Q + + + D +IV N+AFT Sbjct: 821 VMRDAQGALAGYLGTIVDITAQKQAAAQLNLAAKVFEQGGEGIAITDAACNIVMINQAFT 880 Query: 167 EMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKA 226 + GY E G P LL + + + Q E + G Sbjct: 881 RITGYSEVEVLGRNPS-LLASGRHDQAFYQSMWESIESLGHWQGEIWNRRKDGSVYPEWL 939 Query: 227 SISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILA 263 IS V D + + TF DIT+ ++ + Sbjct: 940 LISRV-DGDGAPTHYIGTFIDITQHKEAEASIQRLAH 975 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 33/265 (12%), Positives = 76/265 (28%), Gaps = 13/265 (4%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP 67 L+ + + + L + +IG + ++P Sbjct: 287 RQRTATLEATLDAIPDPLFELGLDGRYHDCHTPRADLLAAPPDALIGRLLTDVLPAAAAA 346 Query: 68 AHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALS--KVSAEGKVYYLALVRDA 125 +R + G + + L+ G W +++ + ++ L RD Sbjct: 347 TCLSALREAQATGHSAGQQFELPLR-----GGNFWFELSVARKPTGVGREPRFVVLARDI 401 Query: 126 SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ--PDT 183 S + + R A + LD ++ + + ++ G E G Sbjct: 402 SERKRAEARLRM---ATEATQLVFWELDLLSDQLRYDTSMLQVLGLDHGEDPGSTGALME 458 Query: 184 LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASIS-PVYDVLAHLQNLV 242 L++ A + E ++T +GE +W++ D V Sbjct: 459 LVHPDHRAALTESFRAAMASAEPVFSFEHQIVTHSGEGVWLQTRGRVAQRDAAGRAVLAV 518 Query: 243 MTFSDITEERQIRQLEGNILAAMCS 267 T +IT+ ++ + Sbjct: 519 GTAMNITDRKRAEAALLRRSEQLVQ 543 Score = 83.9 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 83/283 (29%), Gaps = 21/283 (7%) Query: 109 KVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEM 168 + A V L L+ ++ +++T L +D + P+ L + C+ ++ Sbjct: 264 ALLAGSLVGALLLIWVVTLRRLVRQRTATLEATLDAIPDPLFELGLDGRYHDCHTPRADL 323 Query: 169 FGYCISEASGMQPDTLLNIPEFPADNRI-RLQQLLWKTARDQDEFLLLTRTGEKIWIKAS 227 G +L R Q +A Q E L G W + S Sbjct: 324 LAAPPDALIGRLLTDVLPAAAAATCLSALREAQATGHSAGQQFELPLR---GGNFWFELS 380 Query: 228 ISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCS---SPPFHEMGEIICRNIES 284 ++ + V+ DI+E ++ A ++ Sbjct: 381 VARKPTGVGREPRFVVLARDISERKRAEARLRMATEATQLVFWELDLLSDQLRYDTSMLQ 440 Query: 285 VLNESHVS-------LFALRNGMPIHWASSSHGAEIQNAQ---SWSATIRQRDGAPAGIL 334 VL H L L + + S A + +A+ S+ I G + Sbjct: 441 VLGLDHGEDPGSTGALMELVHPDHRAALTESFRAAMASAEPVFSFEHQIVTHSGEGVWLQ 500 Query: 335 Q----IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIE 373 + + + +I+ A A +S Q ++ Sbjct: 501 TRGRVAQRDAAGRAVLAVGTAMNITDRKRAEAALLRRSEQLVQ 543 Score = 61.2 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 46/450 (10%), Positives = 116/450 (25%), Gaps = 101/450 (22%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNN--IDM 59 +++ A + A E + ++ + + ++ + ++ G E G+ + Sbjct: 400 DISERKRA-EARLRMATEATQLVFWELDLLSDQLRYDTSMLQVLGLDHGEDPGSTGALME 458 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALS---KVSAEGKV 116 L+ D R A E R + S E Q+ G +W + + +A V Sbjct: 459 LVHPDHRAALTESFRAAMASAE---PVFSFEHQIVTHSGEGVWLQTRGRVAQRDAAGRAV 515 Query: 117 YYLALVRDASVEMAQKEQTRQLIIAVDHLDRP---------------------------- 148 + + + + + + L Sbjct: 516 LAVGTAMNITDRKRAEAALLRRSEQLVQLSAASQEINSELDIPVILRQLIAAALKVTGAG 575 Query: 149 -------------VIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNR 195 + ++ + F+ +G + L N E Sbjct: 576 GGAAARIAGGQMVFAEYNRGGQLLPVDYRFSPGYGV-PGRVMQTRSFHLSNDAEHDPWVI 634 Query: 196 IRLQQLLWKTARDQDEFLLLTRTGEKI-WIKASISPVYDVLAHLQNLVMTFSD------- 247 ++Q + + +++R GE + + P ++ L + Sbjct: 635 PEIRQAI--GFDCLLDMPIISRHGELLGCFEIHNKPGGFGDGDVRLLHGLAASAAVALEN 692 Query: 248 ---ITEERQIRQLEGNILA----AMCSSPPFHEMGE------IICRNIESVLNESHVSLF 294 + E RQ+ Q A + S+ + + E++ + + Sbjct: 693 SALLAERRQVEQALRESEALKASVLASAACGIVATDPQGLITVFNPGAEAIFGYAAHEVV 752 Query: 295 ALRNGMPIHWASSSHG-----------------AEIQNAQSWSATI-------RQRDGAP 330 H A + S + ++DG Sbjct: 753 GKVTPTLWHDAEEIAAAAVALSRDLGCRVEAGFDALVARARCSGQVDERETAGVRKDGRR 812 Query: 331 AGI---LQIKTSSGAETSAFIERVADISQH 357 I + + + + ++ + DI+ Sbjct: 813 ITIRLAVTVMRDAQGALAGYLGTIVDITAQ 842 >UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V7A4_9PROT Length = 1013 Score = 880 bits (2276), Expect = 0.0, Method: Composition-based stats. Identities = 195/830 (23%), Positives = 348/830 (41%), Gaps = 58/830 (6%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 A N + + L + +G + N + + N +L G +V G ++ L Sbjct: 202 EAAMNVSKERYRLLLAHSPVGIFHYDLNFVITYCNARFAELIGCPVAQVNGLDLYNL--- 258 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVR 123 + + + Q DG I A S + + +A+V Sbjct: 259 ----SDNAVLPALTAALAGDRGYFEGQYQAVFNDG-WIAMTCAASCDARGNVIGGIAIVE 313 Query: 124 DASVEMAQK-----------EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYC 172 + E+ + +D+L + +L + I N F G Sbjct: 314 SIHERKMAEMALALSNQKHDEERKLFQTILDNLPLGMWMLGVDGKIKFVNETFCNALGIA 373 Query: 173 ISEASGM-QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV 231 + LL + + E+L T G ++ + + Sbjct: 374 AHDFFDAGHYSDLLPLSIADKCKESDRACFMQGEPHYSTEWLPFT-DGRAHLLEMTRVRL 432 Query: 232 YDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMC--SSPPFHEMGEIICRNIESVLNES 289 +D ++ L+ +DITE +++ AA + +I R ++ + + Sbjct: 433 HDSANNVTGLIGLAADITERQKVESELRIAAAAFEAQEGMLITDRHNVIMRVNQAFTSIT 492 Query: 290 HVSLFALRNGMPIHWASSSH--------GAEIQNAQSWSATI--RQRDGAPAGI---LQI 336 + P AS H + W + R++DG + Sbjct: 493 GYLAEEVLGKNPCFLASGRHDAGFYQSMWEGLNEKGKWEGEVWNRRKDGEIYPEYLLISA 552 Query: 337 KTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDD 396 E + ++ DI+ + + + I++L +DP+T LPNR L + L+ Sbjct: 553 VKDIKNEVANYVATFRDITAN--------KAAESEIKKLAFYDPLTLLPNRRLLTDRLNH 604 Query: 397 LVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEG 452 + + + I +D+ + + D+LG+ D L +V R + ++ D L R+ G Sbjct: 605 ALASSARNRNIGALLFIDLDNFKTLNDTLGHDMGDALLKQVALRLKSCIREDDTLARLGG 664 Query: 453 TQFVLVSLEND------VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGK--N 504 +FV++ + I +++ +++ + + + SIG++ G + Sbjct: 665 DEFVVILENLSELAMDAATKAELIGEKILAALNQVYPLASQEYHGAASIGVTLFAGHALS 724 Query: 505 RDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQ 564 D L+ A AM +K+G N +FF +++ ER L L++A+ QL L YQ Q Sbjct: 725 IDELMKQADIAMYQSKKSGRNTLRFFDLDTQKIINERAELEIELRKAVDKKQLHLHYQIQ 784 Query: 565 IFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRS 624 + + G EAL RW P+ G + P+ FIPLAE+ G I IG+WV+ AC QL W+ Sbjct: 785 LNSV-GTPLSAEALIRWVHPVRGLISPAHFIPLAEDTGLILPIGQWVLDTACAQLHSWQD 843 Query: 625 QNIH-IPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKR 683 + L+VN+SA F V + + I+ L +E+TESM++E+ +I Sbjct: 844 ERFTQDLTLAVNVSAKQFHQKNFVALVKETVQRHAINPKLLKLELTESMLVENIEDIIVT 903 Query: 684 IQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSI 743 + LR+MG+ S+DDFGTG+S L L LP+ ++KID+SFV + A++ I ++ Sbjct: 904 MNALREMGIQFSLDDFGTGYSSLQYLKRLPLNQLKIDQSFVRELSSSSSDRAIVRTIVAM 963 Query: 744 GQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 +SLNL V+AEGVET+EQ +L+ I C QGY F +P+P E++ ++ Sbjct: 964 AESLNLNVIAEGVETEEQHTLLQDIGCNYYQGYLFGKPMPIEQLDAILAR 1013 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 880 bits (2274), Expect = 0.0, Method: Composition-based stats. Identities = 224/822 (27%), Positives = 379/822 (46%), Gaps = 54/822 (6%) Query: 8 NAADG---IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 + + +E ++ + + +N AE++WGY EE+IG + +L P Sbjct: 154 HETEEKLHRLAAIVESTGDTVIVSDLQGRIRTWNKGAERMWGYAAEEIIGQPVTVLPPLA 213 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALV 122 + + +R + E + E + KDG +S + A++ Sbjct: 214 KQGEPGQILRRVID----EHEVVRFESRGLHKDGRDFPISLTVSPLFDAENRLTGVSAII 269 Query: 123 RDASVEMAQ----KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 RD + +E+ + + + + ++VLDP+ + ++ N A+ ++E G Sbjct: 270 RDITEMERLKATLQERLKLVEMVFQYSVSCLVVLDPQFNFIRVNPAYARACRRDVAEFEG 329 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLT-----RTGEKIWIKASISPVYD 233 L +P+D R ++++ + T G W ++ PV D Sbjct: 330 RNHFEL-----YPSDARFIFEEVVRTRRPFEAVARPFTFPDQPERGVTYW-DWNLVPVLD 383 Query: 234 VLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI---ICRNIESVLNESH 290 ++ L+ + D+T+ ++ I A + + + I R + + Sbjct: 384 GKGEVEYLLFSLVDVTDRQKATAQLRLIETAFQHTRDAVLITDARARILRVNPAFETITG 443 Query: 291 VSLFALRNGMPIHWASSSH--------GAEIQNAQSWSATI--RQRDGAPAGIL---QIK 337 S + P S H ++ WS I R RDG Sbjct: 444 YSAGEVVGRTPRMLQSGRHDGAFYRRFWRALETEGHWSGEIWNRHRDGHIFPAWQSVSAV 503 Query: 338 TSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDL 397 T+ ++ DIS E +++ I L D +TGLPNR LD L Sbjct: 504 KGPDGSTTHYVSIFTDIS--------EFKRAEAQIRYLSYHDDLTGLPNRAYFQARLDQL 555 Query: 398 VDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGT 453 ++ A + ++ +D + + DSLG++ D+ L +V R ++ ++ R G Sbjct: 556 IEAAARDRKQIALVVLDLDRFKTINDSLGHSVGDELLCQVAERIQDCTGQGDFVARQGGD 615 Query: 454 QFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLST 511 +FV++ ++D ++A+ + + ++KP + + +T S+GIS + + L+ + Sbjct: 616 EFVVILADSDAVRAARVANAMISAIAKPAVAGGRTLIVTPSLGISLYPHDAGDSESLIKS 675 Query: 512 AHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGE 571 A AM + + G N +QFFS M+ + ERL L AL +A+SN + +L YQPQI + Sbjct: 676 ADAAMYHAKSLGRNTYQFFSAEMSAVATERLALENALHQALSNGEFRLYYQPQIEVCSRR 735 Query: 572 LYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPA 631 L G+EAL RW P G VPP RFIPLAEE G I IGRWV+ EACRQ EW++ + I Sbjct: 736 LIGLEALIRWRHPEVGWVPPLRFIPLAEETGIIHRIGRWVLEEACRQQREWQAAGLCIVP 795 Query: 632 LSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMG 691 ++VNLS L + + P QV + + L +E+TE+ +M + ++ L++ G Sbjct: 796 VAVNLSPLQLQKDDFPEQVEALLSGCRLAPGLLELELTETAVMRDVGRMSDMLRKLKERG 855 Query: 692 VGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTV 751 S+DDFGTG+S L L PV ++KID+SF+ + A+ AI ++ + L+L V Sbjct: 856 TRFSIDDFGTGYSSLGYLNRFPVDKLKIDQSFIRDVTRREDHAAITRAIIALAKQLHLKV 915 Query: 752 VAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 VAEGVET EQ E L + C QG++FSRP+PA+EI GW+S Sbjct: 916 VAEGVETAEQLEFLERAGCDGAQGFYFSRPVPADEIAGWLSR 957 Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 55/389 (14%), Positives = 115/389 (29%), Gaps = 31/389 (7%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINE-NDEVMFFNPAAEKLWGYKRE--EVIGNNID 58 + A + A + +G+ ++ + ++ +++ E E Sbjct: 27 RAEAALRRSAFHLREAQQVANLGSWELDLVQGR-LEWSDQVFRIFEIDPERFEASYEAFL 85 Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--V 116 L+ D R R + +L DG R +E + Sbjct: 86 ALVHPDDRERVDAAYRRSIAD----RGSYEIVHRLLMPDGRVKHVRERCQTFYSEDGRPL 141 Query: 117 YYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 + V D + +E+ +L V+ VIV D + I N+ M+GY E Sbjct: 142 RSVGTVWDVTSFHETEEKLHRLAAIVESTGDTVIVSDLQGRIRTWNKGAERMWGYAAEEI 201 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 G P T+L + L++++ + + E L + G I ++SP++D Sbjct: 202 IGQ-PVTVLPPLAKQGEPGQILRRVIDEHEVVRFESRGLHKDGRDFPISLTVSPLFDAEN 260 Query: 237 HLQNLVMTFSDITEERQ----IRQLEGNILAAMCSSPPFHEMGE------IICRNIESVL 286 L + DITE + +++ + S + + + Sbjct: 261 RLTGVSAIIRDITEMERLKATLQERLKLVEMVFQYSVSCLVVLDPQFNFIRVNPAYARAC 320 Query: 287 NESHVSLFALRNGMPIHWASSSHGAEIQNAQS-WSATIR---------QRDGAPAGILQI 336 + + E+ + + A R + L Sbjct: 321 RRDVAEFEGRNHFELYPSDARFIFEEVVRTRRPFEAVARPFTFPDQPERGVTYWDWNLVP 380 Query: 337 KTSSGAETSAFIERVADISQHMAALALEQ 365 E + + D++ A A + Sbjct: 381 VLDGKGEVEYLLFSLVDVTDRQKATAQLR 409 Score = 103 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 35/270 (12%), Positives = 79/270 (29%), Gaps = 19/270 (7%) Query: 116 VYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS- 174 + Y L++ E A + L A + LD + ++ + +F Sbjct: 17 LAYGLLLKPKRAEAALRRSAFHLREAQQVANLGSWELDLVQGRLEWSDQVFRIFEIDPER 76 Query: 175 -EASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYD 233 EAS L++ + + ++ + + LL G ++ Y Sbjct: 77 FEASYEAFLALVHPDDRERVDAA-YRRSIADRGSYEIVHRLLMPDGRVKHVRERCQTFYS 135 Query: 234 VLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNI------ESVLN 287 V T D+T + + + A + S+ + ++ R E + Sbjct: 136 EDGRPLRSVGTVWDVTSFHETEEKLHRLAAIVESTGDTVIVSDLQGRIRTWNKGAERMWG 195 Query: 288 ESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQ-------RDGAPAGILQIKT-- 338 + + + A +I + + +DG I + Sbjct: 196 YAAEEIIGQPVTVLPPLAKQGEPGQILRRVIDEHEVVRFESRGLHKDGRDFPISLTVSPL 255 Query: 339 -SSGAETSAFIERVADISQHMAALALEQEK 367 + + + DI++ A QE+ Sbjct: 256 FDAENRLTGVSAIIRDITEMERLKATLQER 285 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 879 bits (2273), Expect = 0.0, Method: Composition-based stats. Identities = 183/694 (26%), Positives = 305/694 (43%), Gaps = 31/694 (4%) Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 +E + + D + ++ + ++ NR EM G+ E L Sbjct: 153 RELRESEEKFRVTFDQAPVGIAHVNADGRLLLINRRLCEMLGFQERELIESSFPDLCVPE 212 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 R + + E L+ + G IW K ++SP+ D + + DI Sbjct: 213 NRDVHERELKKSVEQGLEYHGFEIPLVHKDGRIIWTKLTLSPMKDAAGVPKYFIHIVEDI 272 Query: 249 TEERQIRQLEGNILAAMC---SSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWA 305 TE + + + I R + + + + P Sbjct: 273 TERKNFEDNLRLSATVFEGSTEAIIITDARANILRVNSAFTAMTGYADHEVVGKNPRLLK 332 Query: 306 SSSH--------GAEIQNAQSWSATI--RQRDGAPAGILQI---KTSSGAETSAFIERVA 352 S +H A + + W I R+++G +S + + ++ Sbjct: 333 SGNHHEEFYRAMWATLSSTGQWQGEIWNRRKNGDIFPAWLTLCAVRNSEDKITNYVGISR 392 Query: 353 DISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYL 408 DI+ ++++ + + D +TGLPNR H+ L + +A + Sbjct: 393 DITL--------RKEAEERLSYQASHDALTGLPNRARFHDRLTHALARAGRDRHEFAILF 444 Query: 409 IGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL-ENDVSNI 467 + +D + + D+LG+ D L V R + L R G +F+++ + Sbjct: 445 LDLDRFKVINDTLGHTVGDFLLQGVTKRLLGGTRESDTLARWGGDEFIILLESIRGAEDA 504 Query: 468 TQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGN 525 A + +V+++P + ++ SIGIS G++ LL A AM + +G N Sbjct: 505 AVAARRILDVLAEPFSVQGHEVFVSGSIGISVYPRDGEDVQALLRCADIAMYRAKDSGKN 564 Query: 526 GWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPL 585 +QF+ M+ ERL L L+ A+ N+ L YQP++ TG + G EAL RW P Sbjct: 565 DYQFYESTMSTGGLERLKLEGDLRYALKRNEFVLHYQPRVNINTGLIVGAEALIRWDLPD 624 Query: 586 HGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQ 645 G + P FIPLAEE G I IG WV+ AC Q +W+ + P +SVNLS F+ + Sbjct: 625 RGLLWPLDFIPLAEESGFIIPIGEWVLRTACLQCRKWQDAGVPHPRVSVNLSTHQFKKDN 684 Query: 646 LPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSG 705 L + V + G+ L +EITES MME+ + +Q L ++GV +++DDFGTG+S Sbjct: 685 LTSTVDRILKETGLSPGLLELEITESAMMENLEKAVATLQGLAELGVNVAIDDFGTGYSS 744 Query: 706 LSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEML 765 L L P+ +KID+SFV + A+ +I S+G++LNL VVAEGVET+EQ +L Sbjct: 745 LGYLKRFPIGALKIDQSFVRHIPSNIDDTAIAMSIISLGKTLNLKVVAEGVETQEQLTVL 804 Query: 766 RKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI 799 R C QGY FS+P+ A+ + ++ + L + Sbjct: 805 RNYQCDEAQGYLFSQPVDADRMTEFLVNPSGLNL 838 Score = 208 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 103/257 (40%), Gaps = 6/257 (2%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 T ++ F +Q +G +N + ++ N ++ G++ E+I ++ L Sbjct: 152 TRELRESEEKFRVTFDQAPVGIAHVNADGRLLLINRRLCEMLGFQERELIESSFPDLCVP 211 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLAL 121 + R H ++ + E G +E E+ L KDG IWT+ LS + V Y++ + Sbjct: 212 ENRDVHERELKKSVEQG---LEYHGFEIPLVHKDGRIIWTKLTLSPMKDAAGVPKYFIHI 268 Query: 122 VRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 V D + ++ R + +I+ D +I++ N AFT M GY E G P Sbjct: 269 VEDITERKNFEDNLRLSATVFEGSTEAIIITDARANILRVNSAFTAMTGYADHEVVGKNP 328 Query: 182 DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNL 241 LL + + L T + Q E + G+ ++ V + + N Sbjct: 329 -RLLKSGNHHEEFYRAMWATLSSTGQWQGEIWNRRKNGDIFPAWLTLCAVRNSEDKITNY 387 Query: 242 VMTFSDITEERQIRQLE 258 V DIT ++ + Sbjct: 388 VGISRDITLRKEAEERL 404 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 878 bits (2269), Expect = 0.0, Method: Composition-based stats. Identities = 205/824 (24%), Positives = 355/824 (43%), Gaps = 45/824 (5%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINEND-EVMFFNPAAEKLWGYKREEVIGNNIDM 59 ++ A D F + + + + + + + N AA + +GY E +G I Sbjct: 233 LRSARALARNDERFRSLFDDHTVPMYIFDRDTLRFLAVNTAAIEQYGYTESEFLGMTIRA 292 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL 119 + P ++ R + M+ + +KDGS I + ++ G+ Sbjct: 293 IRPTSEVARLERHL--ARSADLRQSHTMAGIWRHRRKDGSIISVNVSYHALNFMGRDASF 350 Query: 120 ALVRDASVEMAQK----EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYC-IS 174 L D + ++ + + L +D++ + + D + CN AF G Sbjct: 351 VLADDVTDQINAEAEALRSNQMLEAVIDNIPQRIFWKDLNSRYLGCNMAFARDAGLAYPE 410 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLLWKTAR-DQDEFLLLTRTGEKIWIKASISPVYD 233 + G L F +++ E + G S P D Sbjct: 411 QVVGKSDTDL-PWRAFADLLNEHDREVASTGVPKMNFEVDFV-IDGVHRTRVTSKLPFTD 468 Query: 234 VLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMG---------EIICRNIES 284 + ++ +++DITE+++ A+ +S + E + Sbjct: 469 GDGQVIGVLGSYTDITEQKRADLALRLQSRALDASVNAILITAPSPSGNLIEYVNPAFMR 528 Query: 285 VLNESHVSLFALRNGMPIHWASSSHG-----AEIQNAQSWSATIR--QRDGAPAG---IL 334 + + + G + + SA +R ++DGA + Sbjct: 529 ITGYDLDEVIGHDCRVLQRDDRDQEGVALIREALAANREVSAVVRNYRKDGALFWNQLFI 588 Query: 335 QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYL 394 ++ + I + D+++ + + ++ +E +D +T LPNRN L + L Sbjct: 589 APVPNAEGVITHHIGVINDVTELI--------RYQEQLEYQANYDGLTRLPNRNLLRDRL 640 Query: 395 DDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRI 450 + + A V + +D ++V DSLG++ D+ L V R + + R Sbjct: 641 EHALVVAQRHHTGVAVVFLDLDGFKNVNDSLGHSVGDRLLGVVAERLARCSRTSDTVARH 700 Query: 451 EGTQFVLVSLEN-DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDY 507 G +FV+V + D ++ + +R +++P+ +D + S+G S G + + Sbjct: 701 GGDEFVIVMTDTVDEQSLITWMERVRASIAEPVWLDGTELYVGCSMGASLFPQDGDDAET 760 Query: 508 LLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFA 567 L+ A AM + G N +QF+ P MN RL L L+ A+ +N+ L YQPQ+ Sbjct: 761 LMKKADVAMYRAKDMGRNTFQFYQPEMNASAGARLNLERRLRRALRDNEFLLHYQPQVDI 820 Query: 568 ETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNI 627 +G++ GIEAL RWHDP G VPPS FIPLAEE G I + WV+ EACRQ W+ Q + Sbjct: 821 VSGQIVGIEALVRWHDPEAGLVPPSSFIPLAEESGLIGPLSEWVLREACRQNKAWQDQGL 880 Query: 628 HIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQIL 687 +SVNLSA F+ + V + G++ L +E+TES +M + E + L Sbjct: 881 PPARVSVNLSARVFQQRNIAKLVMQVLAETGLEPRYLELELTESTIMRNAEEAVLMLNEL 940 Query: 688 RDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSL 747 +G+GL++DDFGTG+S LS L PV +KID+SFV + AI ++ SL Sbjct: 941 HALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGVSGDDETITSAIIALAHSL 1000 Query: 748 NLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 L V+AEGVET Q + L++ C +QG++F++PL E I + Sbjct: 1001 KLQVIAEGVETSAQLDFLKERACDEMQGFYFAKPLSTEGISELL 1044 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 876 bits (2265), Expect = 0.0, Method: Composition-based stats. Identities = 202/824 (24%), Positives = 353/824 (42%), Gaps = 48/824 (5%) Query: 1 MKLTDADNAADGIFFPALEQ---NMMGAVLINENDEVMFFNPAAEKLWGYKREEV-IGNN 56 ++ + G++ G ++I E+ ++++ N A K+ GY ++ +G++ Sbjct: 236 LQADERLRQQLGLYNALSNAQSDAGEGVMVI-EDGKIIYANEAVRKIGGYDARDISMGSS 294 Query: 57 IDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV 116 LI R +H ++ + E K G I A + +G Sbjct: 295 FLSLIHPSDRE---RVAQHYKQRIRGEYTPSRYEALAISKLGKPIPIEVAAANYR-DGSE 350 Query: 117 YYLALVRDASVEMAQKEQT----RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYC 172 + L+ D S +E + V+ + V PE ++ + GY Sbjct: 351 RIVVLIIDISSRKQAEEALLQSRAEYRKLVESVKAVVWRATPEAAFTFVSQEAESLLGYP 410 Query: 173 ISEASGMQPDTL--LNIPEFP--ADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASI 228 + E + + L+ + P D R + L E+ + G +W++ + Sbjct: 411 VREWTSNTSFWVDKLHPDDRPWVVDFCARETRQLKDH---VLEYRMRAADGRTVWLQDIV 467 Query: 229 SPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNI 282 + D Q L DIT+ + + ++ + + + + Sbjct: 468 RVIPDRFGKPQELFGVMLDITDRKAAEESLNLSKQVFDNTSEAILIADRDRNILEVNQAY 527 Query: 283 ESVLNESHVSLFALRNGMPIHWASS--SHGAEIQNAQSWSATI--RQRDGAPAGIL---Q 335 + + A G +Q W + ++R G Sbjct: 528 LDMTGYGREDCVGTYLALLDEPAGGGQLIGNLVQQHGKWMGELLAQKRSGEYYPAWVSIS 587 Query: 336 IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLD 395 + ++ + DISQ ++++ + ++ L D +TGLPNR L ++ Sbjct: 588 TVHDNHGSLQNYVVVLTDISQ--------RKQAEERLQFLATHDGLTGLPNRTLLQERME 639 Query: 396 DLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIE 451 V +A V I +D + + D+LG+ D L EV R E L+ + R Sbjct: 640 LAVLRAQRYQQCVGVLFIDLDRFKIINDTLGHQAGDVLLQEVAGRLGECLRQTDTIARQG 699 Query: 452 GTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYL 508 G +FV++ + + + +A ++ + +++P ++ + ++ SIGIS D G + L Sbjct: 700 GDEFVVLVEDFIEQQYLVNVARKIMHALAQPFILMQQELYISASIGISVYPDDGVDISSL 759 Query: 509 LSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAE 568 L A AM + +G N + F+S N RL L +L+ A+ N+ L+YQ ++ Sbjct: 760 LKNADMAMYRAKDDGKNTFHFYSADGNANSVSRLTLENSLRRALERNEFSLLYQAKLDLA 819 Query: 569 TGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIH 628 + G EAL RWH G V P FIP+AEE G I IG WV+ +ACR W+ Sbjct: 820 EQNIIGAEALIRWHSAELGMVSPQDFIPVAEETGMIIEIGEWVLQQACRDACHWQEVAGR 879 Query: 629 IPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILR 688 + VN+SA FR + L +S+A+ G+ + L +EITESM+M++ + +Q R Sbjct: 880 PIRVGVNISARQFREDSLYQAISNALEESGLTPNCLELEITESMIMQNAERASQMLQHFR 939 Query: 689 DMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLN 748 ++G + +DDFGTG+S L L P+ +KID+SFV + +A+ +AI ++ SL Sbjct: 940 NLGSYVLIDDFGTGYSSLGYLKHFPIDSLKIDRSFVRDIPQDSDDMAITQAIIAMAHSLK 999 Query: 749 LTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 + VVAEGVET+ Q E LR C +QGY FSRPL E+ G + Sbjct: 1000 INVVAEGVETQAQLEFLRGQGCDQLQGYIFSRPLVVEDFVGLLR 1043 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 875 bits (2262), Expect = 0.0, Method: Composition-based stats. Identities = 210/840 (25%), Positives = 368/840 (43%), Gaps = 61/840 (7%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINEN-DEVMFFNPAAEKLWGYKREEV--IGNNID 58 ++ + + + A++ + + + V+F N + GY +EE+ +G N Sbjct: 574 EVELSLIEREKFWSDAVQAVPDTLYIHDLHARRVIFSNHHLGQQLGYNQEELARMGENFW 633 Query: 59 M-LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFA---LSKVSAEG 114 L+ D + + N + + +L+ +DG W S+ + Sbjct: 634 ETLLHPDDQEYYWRI--RNLQHVVGDGLLLDSQLRWRHRDGRWHWFDIREQAFSRDRSGR 691 Query: 115 KVYYLALVRDAS----VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFG 170 + + +D + A +E R+ + +++ + D E + + + +FG Sbjct: 692 VARLIGVAKDITFTVEANNALRENGRRYRMLAENISDVIFSTDAELNASYVSPSVQHVFG 751 Query: 171 YCISEASGMQPDT-------------LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTR 217 Y A LL +R +L +L + L Sbjct: 752 YSPEWALLNGLHQTATNPRQLGRLNGLLRRVRHAIGDRQKLAELRENPGQHLFALDCLRA 811 Query: 218 TGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI 277 G KI I+ I ++D + L+ DI+++R+ + S + + Sbjct: 812 DGRKIPIELRIVLMWDEHDRFEGLLGIARDISQQRRAERELRMAATVFEHSTAAIMVTDP 871 Query: 278 ICR---NIESVLNESHVSLFALRNGMPIHWASSSHGA--------EIQNAQSWSATI--R 324 +S + S + + P + A +Q++ SW I + Sbjct: 872 AGYIVQVNDSFSRLTGYSPADVLDQQPRLLTADRQEANQLKHVLASLQHSGSWEGEILQK 931 Query: 325 QRDGAPAGIL---QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPM 381 ++ G + +F+ +DIS E++ S + I +L +D + Sbjct: 932 RKTGELYPSWVGITAVRDEEGDLVSFVCFFSDIS--------ERKASERRIHRLAYYDAL 983 Query: 382 TGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRF 437 T LPNR + L + +A V+ + +D + + DSLG+A D+ L EV R Sbjct: 984 THLPNRTLFQDRLHTALQQAERNGQWVVLMFLDLDRFKPINDSLGHAAGDRMLQEVATRL 1043 Query: 438 REKLKPDQYLCRIEGTQFVLVSLENDVSN-----ITQIADELRNVVSKPIMIDDKPFPLT 492 + D + R+ G +F L+ Q+A+ + +++P ++ + F +T Sbjct: 1044 SACVSQDDTVARMGGDEFTLLLPSQGDREIALKRAIQVAELILGRLARPFTLEGREFFVT 1103 Query: 493 LSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKE 550 SIG++ G L+ A AM + ++ G N +QF+ MN ERL L + L+ Sbjct: 1104 ASIGVALSPQDGAELSLLMKNADTAMYHAKEMGKNNFQFYQAEMNARALERLELESDLRR 1163 Query: 551 AISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRW 610 A+ + L YQPQ + L G EAL RW P G VPPS FIP+ EEIG + +G W Sbjct: 1164 ALELGEFVLHYQPQFTGDGRRLTGAEALLRWQHPRRGLVPPSEFIPVLEEIGLVAQVGDW 1223 Query: 611 VIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITE 670 ++AEAC+QL W + +P +SVNLSA F QL +++ ++ GI L +E+TE Sbjct: 1224 LLAEACKQLRSWHKAKVRVPKVSVNLSARQFADGQLGERIAAILYETGIPPACLELELTE 1283 Query: 671 SMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTE 730 S++M E + + L+ +G+ ++VDDFGTG+S L+ L P+ +KID+SFVD Sbjct: 1284 SILMSDVAEAMQILSGLKRLGLAIAVDDFGTGYSSLNYLKQFPIDVLKIDRSFVDGLPHG 1343 Query: 731 KRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 ++ + AI ++ SLNL V+AEGVE++ Q + LR+ C +QGY F RP+PAE+ Sbjct: 1344 EQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQGYLFGRPMPAEQFGML 1403 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 93/272 (34%), Gaps = 13/272 (4%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVI------- 53 ++ +A + E + + +P+ + ++GY E + Sbjct: 706 VEANNALRENGRRYRMLAENISDVIFSTDAELNASYVSPSVQHVFGYSPEWALLNGLHQT 765 Query: 54 ---GNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV 110 + L R H R + L + DG KI + + Sbjct: 766 ATNPRQLGRLNGLLRRVRHAIGDRQKLAELRENPGQHLFALDCLRADGRKIPIELRIVLM 825 Query: 111 SAEGKV--YYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEM 168 E L + RD S + + + R +H ++V DP +IVQ N +F+ + Sbjct: 826 WDEHDRFEGLLGIARDISQQRRAERELRMAATVFEHSTAAIMVTDPAGYIVQVNDSFSRL 885 Query: 169 FGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASI 228 GY ++ QP LL A+ + L + + E L +TGE I Sbjct: 886 TGYSPADVLDQQP-RLLTADRQEANQLKHVLASLQHSGSWEGEILQKRKTGELYPSWVGI 944 Query: 229 SPVYDVLAHLQNLVMTFSDITEERQIRQLEGN 260 + V D L + V FSDI+E + + Sbjct: 945 TAVRDEEGDLVSFVCFFSDISERKASERRIHR 976 Score = 92.4 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 54/436 (12%), Positives = 117/436 (26%), Gaps = 76/436 (17%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 +T A + AL ++ + + + NP AE+L+G + +++ L+P Sbjct: 283 MTLASQRSLRQAATALAAIDERVLVTRADGRLSYLNPQAERLFGISSAQARQHHLLGLLP 342 Query: 63 ---RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--Y 117 E RV G R L + + + E + Sbjct: 343 DLEPGWLTDAGGDGETRSELLPLRVRGEPRTFTLSRHPLASYPALADQAWTLREQILQGG 402 Query: 118 YLALVRDASVEMAQ----KEQTRQLIIAVDHLDRPVIVLDPER----------------- 156 + ++RD + E +E R+ + + + VLD Sbjct: 403 QVWVLRDVTEEQHALGVLEETRRRYQDIFEGVGVALCVLDLSALRQALVEQGLDSCAALR 462 Query: 157 -----------------HIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPAD--NRIR 197 I + N + +E LL+ D Sbjct: 463 AWLAGEPGRQQALLERIRITEINDVSRRLLQIDSTE---QAWQRLLDHGPLQPDSLRLQV 519 Query: 198 LQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIR-- 255 ++ L+ + + E L + + + + + ++ SD+T +++ Sbjct: 520 IEALIERRPVLELEATLRCGKSTPRHLWLQLR-LPENPGEWHAVTLSLSDVTSRKEVELS 578 Query: 256 --QLEGNILAAMCSSPPFHEMGEIICRNIE-------SVLNESHVSLFALRNGMPIHWAS 306 + E A+ + P + ++ R + L + L + Sbjct: 579 LIEREKFWSDAVQAVPDTLYIHDLHARRVIFSNHHLGQQLGYNQEELARMGENFWETLLH 638 Query: 307 SSHGAEIQNAQSWSATI------------RQRDGAPAG----ILQIKTSSGAETSAFIER 350 ++ + R RDG + I Sbjct: 639 PDDQEYYWRIRNLQHVVGDGLLLDSQLRWRHRDGRWHWFDIREQAFSRDRSGRVARLIGV 698 Query: 351 VADISQHMAALALEQE 366 DI+ + A +E Sbjct: 699 AKDITFTVEANNALRE 714 Score = 55.0 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 50/193 (25%), Gaps = 28/193 (14%) Query: 98 GSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERH 157 G ++ L + + LA + RQ A+ +D V+V + Sbjct: 264 GVTVYMLLRLHREQQGLRAMTLA----------SQRSLRQAATALAAIDERVLVTRADGR 313 Query: 158 IVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTR 217 + N +FG ++A LL P+ + E L L Sbjct: 314 LSYLNPQAERLFGISSAQARQHHLLGLL--PDLEPGWLTD----AGGDGETRSELLPLRV 367 Query: 218 TGEKIWIKASISPVYD----VLAHLQ--------NLVMTFSDITEERQIRQLEGNILAAM 265 GE S P+ V D+TEE+ + Sbjct: 368 RGEPRTFTLSRHPLASYPALADQAWTLREQILQGGQVWVLRDVTEEQHALGVLEETRRRY 427 Query: 266 CSSPPFHEMGEII 278 + + Sbjct: 428 QDIFEGVGVALCV 440 >UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5X9_9PROT Length = 927 Score = 871 bits (2251), Expect = 0.0, Method: Composition-based stats. Identities = 202/820 (24%), Positives = 357/820 (43%), Gaps = 48/820 (5%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINE-NDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 K A +E + G VLI + + + N E L+GY E+IG +I ++ Sbjct: 124 KAAAALRLQSQ----IVENAVEGIVLIKASDSTIQYTNRQFETLFGYAPGELIGKHISII 179 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA-EGKVYYL 119 + + S E+ +KDG+ I T S E ++ Sbjct: 180 NAPGNKSQMETA--QEINRQLEKEGVWSGEVFNRRKDGTTINTFLNASSFQHPELGDLWI 237 Query: 120 ALVRDASVEMAQK----EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 RD + + E+ Q A+D ++D + +++ N A+ + GY E Sbjct: 238 GYQRDITKRKLTEAVMLEKESQYRAAIDTAADGFWLVDMQGRLLEVNDAYARLSGYSREE 297 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL 235 GM L + + R R+++++ + + + + G + S + V Sbjct: 298 LIGMSIPEL-DAIDNSELVRARIEEIIRNGGYLEFDTMHKRKDGSLWPVHIS-TTYSSVS 355 Query: 236 AHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNES 289 + T D+TE+++ + +S + + + E + + Sbjct: 356 GGRCFVFST--DLTEQKRAEESLRLAAMVYENSSEAILVTDADNLIIAVNPAFEQMTGYA 413 Query: 290 HVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG---ILQIKTS 339 + ++G S + W + ++++G + + Sbjct: 414 AAEVLGKNPRIFKSGRHDRAFYHSMWLALDTEGYWHGEVWDKRKNGEEYIKLLTINVIRD 473 Query: 340 SGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD 399 + DI+ E++K + I + +D +T LPNR H+ L+ Sbjct: 474 DDGAIYRHVALFTDIT--------ERKKVEELIWRQANYDSLTKLPNRQMFHDRLEQEAK 525 Query: 400 KAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF 455 KA + LI +D ++V D+LG+ D L+E R ++ + R+ G +F Sbjct: 526 KAHRAGLSMALLLIDLDRFKEVNDTLGHDKGDILLIEAARRISACVRESDTVARLGGDEF 585 Query: 456 VLVS-LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTA 512 +++ D+++I ++A ++ +++P +D +P ++ SIGIS D L A Sbjct: 586 IVILSELEDMASIDRVAQDILGSLAEPFKLDAEPAYISASIGISLYPNDATELDVLFKHA 645 Query: 513 HNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGEL 572 AM + G N + +F+ M E + R+ L L+ A++ Q ++ YQP + +G++ Sbjct: 646 DQAMYVAKYAGRNRFNYFTKDMQEAAQARMHLANDLRIAVAAGQFRVYYQPIVEMSSGQI 705 Query: 573 YGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPAL 632 Y EAL RW P+ G V P+ FIPLAEE G I IG WV +A +Q+ +WR + + Sbjct: 706 YKAEALIRWQHPVRGMVSPAEFIPLAEETGLIVPIGEWVFRQAVQQVVQWRRKFHRSFQI 765 Query: 633 SVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGV 692 SVN S + FR + + + + G + VEITE ++++ + E+ K++ RD G+ Sbjct: 766 SVNKSPVQFRHAESL-SWPEYLEQQHVSGDSIIVEITEGLLLDAEVEVNKKLLRFRDAGI 824 Query: 693 GLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVV 752 +++DDFGTG+S LS L + +KID+SFV LAL EAI + L V+ Sbjct: 825 QVAIDDFGTGYSSLSYLKEFDIDYLKIDQSFVRNLGPGTSDLALCEAIIVMAHKLGFKVI 884 Query: 753 AEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 AEGVET Q E+L C QGY +SRPLP EE ++ Sbjct: 885 AEGVETSTQHELLAAAGCDYGQGYLYSRPLPPEEFERQLA 924 Score = 157 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 56/382 (14%), Positives = 116/382 (30%), Gaps = 32/382 (8%) Query: 15 FPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIR 74 ++ + + +++ N A E+ WG + + G + P + E R Sbjct: 10 QDIVDSIPAATFIKDAGGRIVYMNHACEEQWGITFDVLGGTDGSQFFPPEQIERFREKDR 69 Query: 75 HNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYY-LALVRDASVEMAQKE 133 GGK K ++I AEGK+ + + + D + + Sbjct: 70 EVIAGGKQ--IEYEAPFWNAKLKENRIGFFIKNPTFDAEGKLLFLVCITFDVTEDKKAAA 127 Query: 134 QTRQLIIAVDHLDRPVIVLDP-ERHIVQCNRAFTEMFGYCISEASGMQPDTL-LNIPEFP 191 R V++ ++++ + I NR F +FGY E G + + Sbjct: 128 ALRLQSQIVENAVEGIVLIKASDSTIQYTNRQFETLFGYAPGELIGKHISIINAPGNKSQ 187 Query: 192 ADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEE 251 + + + L K E + G I + S + DIT+ Sbjct: 188 METAQEINRQLEKEGVWSGEVFNRRKDGTTINTFLNASSFQHPELGDLW-IGYQRDITKR 246 Query: 252 RQIR----QLEGNILAAMCSSPPFHEMGEIICR------NIESVLNESHVSLFA-----L 296 + + E AA+ ++ + ++ R + S L L Sbjct: 247 KLTEAVMLEKESQYRAAIDTAADGFWLVDMQGRLLEVNDAYARLSGYSREELIGMSIPEL 306 Query: 297 RNGMPIHWASSSHGAEIQNAQSWS--ATIRQRDGAPAGILQIKTSSGAETSAFIERVADI 354 + I+N +++DG+ + T S D+ Sbjct: 307 DAIDNSELVRARIEEIIRNGGYLEFDTMHKRKDGSLWPVHISTTYSSVSGGRCFVFSTDL 366 Query: 355 SQHMAALALEQEKSRQHIEQLI 376 + EQ+++ + + L Sbjct: 367 T--------EQKRAEESLR-LA 379 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 37/267 (13%), Positives = 80/267 (29%), Gaps = 23/267 (8%) Query: 133 EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPA 192 + +Q+ VD + + D IV N A E +G + G + PE Sbjct: 4 QLNKQVQDIVDSIPAATFIKDAGGRIVYMNHACEEQWGITF-DVLGGTDGSQFFPPEQIE 62 Query: 193 DNRIRLQQLLWKTARDQDEFLLL-TRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEE 251 R + ++++ + + E + E +P +D L LV D+TE+ Sbjct: 63 RFREKDREVIAGGKQIEYEAPFWNAKLKENRIGFFIKNPTFDAEGKLLFLVCITFDVTED 122 Query: 252 RQIRQLEGNILAAMCSSPPFHEM-------GEIICRNIESVLNESHVSLFA-------LR 297 ++ + ++ + + R E++ + L Sbjct: 123 KKAAAALRLQSQIVENAVEGIVLIKASDSTIQYTNRQFETLFGYAPGELIGKHISIINAP 182 Query: 298 NGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGIL--QIKTSSGAETSAFIERVAD 353 + +++ WS + R++DG +I D Sbjct: 183 GNKSQMETAQEINRQLEKEGVWSGEVFNRRKDGTTINTFLNASSFQHPELGDLWIGYQRD 242 Query: 354 ISQHMAALALEQEKSRQHIEQLIQFDP 380 I++ A+ + + D Sbjct: 243 ITKRKLTEAVML---EKESQYRAAIDT 266 >UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4VY11_9CYAN Length = 1393 Score = 867 bits (2242), Expect = 0.0, Method: Composition-based stats. Identities = 203/829 (24%), Positives = 349/829 (42%), Gaps = 58/829 (6%) Query: 8 NAADG---IFFPALEQNMMGAVLINE---NDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 ++ + A+ + G ++ + ++ V++ NPA E + GY +EVIG+N Sbjct: 572 QQSEANLYLMQRAIAASNNGVIITDPNQPDNPVIYVNPAFESMTGYTAKEVIGHNCRFWQ 631 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYL 119 D A + + + LQ +KDGS W +S V +++ Sbjct: 632 EPDYNQAGVTKLATAIQEQREC----HVILQNYRKDGSTFWNELYVSPVFDGDGYLTHFV 687 Query: 120 ALVRDASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDPERH-IVQCNRAFTEMFGYCIS 174 + D + +E RQ L + LD V E + N A ++G +S Sbjct: 688 GIQTDITKRKQAEEALRQSEEKLDSILRSLDDVVWSASLENQQFIYLNPATERVYGRPVS 747 Query: 175 EASGMQ-PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYD 233 + + P+ +++ + ++D E+ ++ GE W++ +YD Sbjct: 748 DFVDCPSLWQFVIHPDDRQRVERASNRMMHQGSKD-LEYRVVRPDGEVRWLRDRARLIYD 806 Query: 234 VLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI----------ICRNIE 283 + +D+T+ +Q + +G + + + Sbjct: 807 HRGIAIRMDGIATDMTKRKQAEAALLKSEEQFRLTFELAPIGMAMTSLEGQFLKVNQALC 866 Query: 284 SVLNESHVSLF-----ALRNGMPIHWASSSHGAEIQ-NAQSWSATIR--QRDGAPAGIL- 334 L + L + + + H + +Q R + G + Sbjct: 867 DALGYTAQELLALTFTEISHPTERALHFTQHQSLLQGELSHLQTERRLISKSGRIVNAIL 926 Query: 335 --QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHN 392 + + + +I +V DIS ++++ + + D +TGLPNR + Sbjct: 927 KVVLVRDAQGQPLHYISQVVDIS--------DRKRMEEQLLHDAFHDVLTGLPNRALFMD 978 Query: 393 YLDDLVDKAVS-----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYL 447 L+ + +A V ++ +D + + DSLG+ D+ L + R + L+P L Sbjct: 979 RLEYALRRAGQRWDYLCAVIVLDLDRFKVINDSLGHLVGDRLLSAIAERLQGCLRPSDTL 1038 Query: 448 CRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDL--GKN 504 R+ G +F ++ + + + T IA + + +D T SIGI+ Sbjct: 1039 ARLGGDEFTILLDDIPNTAAATDIAKSIHQTLESSFNLDGYEVFATASIGIALSGMGYHR 1098 Query: 505 RDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQ 564 + LL A AM + G + F AM+ +L L L+ AI +L++ YQP Sbjct: 1099 AEDLLRDADTAMHRAKLQGTACYVMFDTAMSGRALAQLRLETELRWAIERQELEVYYQPI 1158 Query: 565 IFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRS 624 I TG++ G EAL RW P G + P FIPLAEE G I IG+WV+ +C QL +W+ Sbjct: 1159 ISLGTGKITGFEALVRWQHPEQGMISPGAFIPLAEETGLIIPIGQWVLRTSCYQLRQWQQ 1218 Query: 625 QN--IHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFK 682 Q +SVNLS F L Q++ + ++ L +EITES +MEH Sbjct: 1219 QFPHYPPLTMSVNLSGKQFSQTNLIEQIAQIIQETEVNPSTLKLEITESGIMEHSDSASA 1278 Query: 683 RIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITS 742 ++ L+ + + L +DDFGTG+S LSRL P+ +KID+SFV R +++AI + Sbjct: 1279 LLERLKALNIQLYIDDFGTGYSSLSRLHQFPIDALKIDRSFVSRMGDAGENGEIVQAIVT 1338 Query: 743 IGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 + +L + VVAEG+ET Q LR C QGYFFS+PL + M Sbjct: 1339 LAHNLGMDVVAEGIETNMQLAQLRGRRCEYGQGYFFSKPLNRQAAEQLM 1387 Score = 160 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 95/301 (31%), Gaps = 19/301 (6%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINEND-EVMFFNPAAEKLWGYKREEVIGNN--ID 58 + +A ++ L + + + ++ NPA E+++G + + Sbjct: 698 QAEEALRQSEEKLDSILRSLDDVVWSASLENQQFIYLNPATERVYGRPVSDFVDCPSLWQ 757 Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYY 118 +I D R G E ++ + DG W R + + Sbjct: 758 FVIHPDDRQRVERASNRMMHQGSK-----DLEYRVVRPDGEVRWLRDRARLIYDHRGIAI 812 Query: 119 L--ALVRDASVEMAQK----EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYC 172 + D + + + Q + + + + E ++ N+A + GY Sbjct: 813 RMDGIATDMTKRKQAEAALLKSEEQFRLTFELAPIGMAMTSLEGQFLKVNQALCDALGYT 872 Query: 173 ISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVY 232 E + + + E L + + Q E L++++G + + V Sbjct: 873 AQELLALTFTEISHPTERALHFTQHQSLLQGELSHLQTERRLISKSGRIVNAILKVVLVR 932 Query: 233 DVLAHLQNLVMTFSDITEERQIRQLE-----GNILAAMCSSPPFHEMGEIICRNIESVLN 287 D + + DI++ +++ + ++L + + F + E R + Sbjct: 933 DAQGQPLHYISQVVDISDRKRMEEQLLHDAFHDVLTGLPNRALFMDRLEYALRRAGQRWD 992 Query: 288 E 288 Sbjct: 993 Y 993 Score = 95.8 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 36/294 (12%), Positives = 88/294 (29%), Gaps = 44/294 (14%) Query: 4 TDA-DNAADGIFFPALEQNMMGAVLINE-NDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 T+A + F + + + + +++ N A L+G E++GN++ Sbjct: 131 TNAELQQQEEQFRAITQAFPVPVAIARVSDGTIVYGNSHANVLFGVATSELVGNSMPDFY 190 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLAL 121 +P + + + EL + +G+ +W ++ ++ + L++ Sbjct: 191 ------ENPADWQRLLARLDQKGVVQNEELCVHTINGTPLWVTVSMQVLTLNQEKAILSV 244 Query: 122 VRDASV-----------EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFG 170 D S E K+ V+ + + + +V N ++ G Sbjct: 245 FHDISDTYQQLTQYQQTEAVLKDSEACYRTLVEQSPNAIALEH-QGTLVYINPRGVKLLG 303 Query: 171 -YCISEASGMQPDTLLNIPEFPADNRIRLQ--------------------QLLWKTARDQ 209 ++ G + +R Q L + Sbjct: 304 TISHNQLIGKPWSDFNPKDQGNQRDREDHQVIGSEYTEKFSDHKRRSNPPHALTLPTKFV 363 Query: 210 DEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILA 263 E ++ G+ I ++ + P + + + D+T Q Q Sbjct: 364 TE-QIVQLDGQIIDVEIARLP--AIYQGQRATQLVIRDLTHREQPDQELRVRAR 414 Score = 94.7 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 53/452 (11%), Positives = 123/452 (27%), Gaps = 95/452 (21%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWG-YKREEVIGNNIDMLIP--- 62 ++ + +EQ+ + +++ NP KL G ++IG P Sbjct: 265 LKDSEACYRTLVEQSPNAIA-LEHQGTLVYINPRGVKLLGTISHNQLIGKPWSDFNPKDQ 323 Query: 63 ------RDLRPAHPEYIRHNREGGKARVEGMSREL-------QLEKKDGSKIWTRFALSK 109 D + EY + + + L Q+ + DG I A Sbjct: 324 GNQRDREDHQVIGSEYTEKFSDHKRRSNPPHALTLPTKFVTEQIVQLDGQIIDVEIARLP 383 Query: 110 VSAEGKVYYLALVRDASVE----MAQKEQTRQLIIAVDHLDRPVIVLDPER--------- 156 +G+ ++RD + + + RQ R + LD Sbjct: 384 AIYQGQRATQLVIRDLTHREQPDQELRVRARQQATIAKLSQRALSGLDLNTLMDEAVSTI 443 Query: 157 ----HIVQCNRAFTEMF------------GYCIS----EASGMQ----------PDTLLN 186 + C E+ G+ G + Sbjct: 444 AQTLEVEYC--KVLELLPNGNVFLLKAGVGWSPGLVGYALVGANRNSQAGYNLISQEPVV 501 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVY-----DVLAHLQNL 241 + + P D R LL+ +++ + + + + D + LQ + Sbjct: 502 VEDLPIDTRFSGPPLLYNHRVVSGVSVVIPGQEQPFGVLGAHTTSQRRFSEDDIHFLQAV 561 Query: 242 VMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE---------IICRNIESVLNESHVS 292 + +Q + A+ +S + + + ES+ + Sbjct: 562 ANVLALAIGHQQSEANLYLMQRAIAASNNGVIITDPNQPDNPVIYVNPAFESMTGYTAKE 621 Query: 293 LFALRNGMPIHWASSSHG-----AEIQNAQSWSATIR--QRDGAPAG---ILQIKTSSGA 342 + + G IQ + ++ ++DG+ + Sbjct: 622 VIGHNCRFWQEPDYNQAGVTKLATAIQEQRECHVILQNYRKDGSTFWNELYVSPVFDGDG 681 Query: 343 ETSAFIERVADISQHMAALALEQEKSRQHIEQ 374 + F+ DI++ ++++ + + Q Sbjct: 682 YLTHFVGIQTDITK--------RKQAEEALRQ 705 Score = 57.3 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 52/154 (33%), Gaps = 6/154 (3%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDP-ERHIVQCNRAFTEMFGYCISEASGM 179 + ++Q Q PV + + IV N +FG SE G Sbjct: 125 IANCLHTNAELQQQEEQFRAITQAFPVPVAIARVSDGTIVYGNSHANVLFGVATSELVGN 184 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 E PAD + L +L K +E + T G +W+ S+ + L + Sbjct: 185 SMPDFY---ENPADWQRLLARLDQKGVVQNEELCVHTINGTPLWVTVSMQVLT--LNQEK 239 Query: 240 NLVMTFSDITEERQIRQLEGNILAAMCSSPPFHE 273 ++ F DI++ Q A + S + Sbjct: 240 AILSVFHDISDTYQQLTQYQQTEAVLKDSEACYR 273 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 866 bits (2239), Expect = 0.0, Method: Composition-based stats. Identities = 201/809 (24%), Positives = 375/809 (46%), Gaps = 48/809 (5%) Query: 14 FFPALEQNMMGA-VLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEY 72 F L+++ +G V + V+F N ++ G E+ IG++ D + E Sbjct: 10 FLGILDESPVGVSVSRRRDGLVLFVNRRFCQITGMTPEQCIGHSARRHFADDDQR--LEV 67 Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQK 132 +R +E G+ +++ + DGS W+ + + G+ LA + D S + Sbjct: 68 VRQLKEAGEIA----DADVKFFRVDGSSFWSVLTIRSATLNGEAVNLAWLYDVSKRKQAE 123 Query: 133 EQT----RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 + + +D +++++ E I+ N A + +F + G L Sbjct: 124 QAILDGKTLIRAMLDSSTDGIVLVNAEGTILAVNAAASAIFEKNSDDLPGKAIWDHL-PD 182 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 A R + ++L + + + + + + V D + + + D+ Sbjct: 183 SVVAPMRRGIDRVLDRRETVESHHAIGAK---LFDVHMHL--VADSVGQRDRVAIFSRDV 237 Query: 249 TEERQIRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNESHVSLFA-----LR 297 T+ Q RQ + A+ +P + + + R V S + L+ Sbjct: 238 TQSHQRRQQLRKLETALEQAPVSVMITDSHGAIEYVNRAFVLVSGYSEDEVLGRNPRLLK 297 Query: 298 NGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG---ILQIKTSSGAETSAFIERVA 352 +G + + + +W + R +DG+ + + F+ Sbjct: 298 SGETVASLYRDMWHCLASGATWQGELCNRAKDGSLFWEYATISPIRDDDGVVTHFMAVKE 357 Query: 353 DISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA----VSPVVYL 408 +I+Q ++++ Q + D +TGLPNR L + + ++ A + Sbjct: 358 NITQ--------RKETEQQLVHQATHDTLTGLPNRLLLEDRVHHAIEVAKREGRRIGLMF 409 Query: 409 IGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNI 467 + +D + V DSLG+ D+ L V +R R L+ + R+ G +FV+V + + Sbjct: 410 LDLDRFKIVNDSLGHVAGDELLKVVSDRLRHTLRRSDTVARLGGDEFVVVLTHFQSTTEL 469 Query: 468 TQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGN 525 ++A+++ + +P+ + + SIGI+ D G N + L+ A AM ++ G N Sbjct: 470 AEVAEKISAALDEPVELSGHKVHVGASIGIAIYPDDGDNFNALMKDADTAMYRAKQKGRN 529 Query: 526 GWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPL 585 + F+ MN+ +RL L AL+ A+ + +L YQPQ+ +TG G+EAL RW+ P Sbjct: 530 TFCFYDSNMNDEALDRLKLEEALRRALVRGEFQLFYQPQVDLQTGRTSGVEALIRWNSPE 589 Query: 586 HGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQ 645 G V P+ FIP+AEE I IG WV+ E+CRQ+A WR + ++VN+S F ++ Sbjct: 590 RGQVSPALFIPVAEESNLISMIGWWVLEESCRQIAAWREAGLTGIKVAVNVSGRQFLNHA 649 Query: 646 LPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSG 705 L +SD M + + QL +E+TES +M +++ LR++G+ +SVDDFGTG+S Sbjct: 650 LVECISDLMAQYAVLPSQLEIELTESTVMAEPDRAIEQLTRLREIGIQVSVDDFGTGYSS 709 Query: 706 LSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEML 765 LS L LP++ IK+D+SFV + A++ AI + +L++++VAEGVET+ + + L Sbjct: 710 LSYLKRLPLSTIKVDRSFVRDVNNQSDNAAIVSAILGLADALDMSIVAEGVETEGEEQHL 769 Query: 766 RKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 + C +QG+ +++P+PA+++ WM Sbjct: 770 KDAGCIKVQGFRYAKPMPADQLAAWMLRQ 798 Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 94/263 (35%), Gaps = 8/263 (3%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + A + L+ + G VL+N ++ N AA ++ +++ G I + Sbjct: 121 QAEQAILDGKTLIRAMLDSSTDGIVLVNAEGTILAVNAAASAIFEKNSDDLPGKAIWDHL 180 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLAL 121 P + I + R E + + K L S + Sbjct: 181 PDSVVAPMRRGIDRVLD----RRETVESHHAIGAK---LFDVHMHLVADSVGQRDRVAIF 233 Query: 122 VRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 RD + +++Q R+L A++ V++ D I NRAF + GY E G P Sbjct: 234 SRDVTQSHQRRQQLRKLETALEQAPVSVMITDSHGAIEYVNRAFVLVSGYSEDEVLGRNP 293 Query: 182 DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNL 241 LL E A + L A Q E + G W A+ISP+ D + + Sbjct: 294 -RLLKSGETVASLYRDMWHCLASGATWQGELCNRAKDGSLFWEYATISPIRDDDGVVTHF 352 Query: 242 VMTFSDITEERQIRQLEGNILAA 264 + +IT+ ++ Q + Sbjct: 353 MAVKENITQRKETEQQLVHQATH 375 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 65/166 (39%), Gaps = 10/166 (6%) Query: 2 KLTDADNAADGI--FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDM 59 +T + + ALEQ + ++ + + + + N A + GY +EV+G N + Sbjct: 236 DVTQSHQRRQQLRKLETALEQAPVSVMITDSHGAIEYVNRAFVLVSGYSEDEVLGRNPRL 295 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--Y 117 L + + + H G EL KDGS W +S + + V + Sbjct: 296 LKSGETVASLYRDMWHCLASGA----TWQGELCNRAKDGSLFWEYATISPIRDDDGVVTH 351 Query: 118 YLALVRDASVEMAQKEQT--RQLIIAVDHLDRPVIVLDPERHIVQC 161 ++A+ + + ++Q + + L +++ D H ++ Sbjct: 352 FMAVKENITQRKETEQQLVHQATHDTLTGLPNRLLLEDRVHHAIEV 397 >UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=B1XZA8_LEPCP Length = 1147 Score = 866 bits (2239), Expect = 0.0, Method: Composition-based stats. Identities = 207/823 (25%), Positives = 357/823 (43%), Gaps = 48/823 (5%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVM--FFNPAAEKLWGYKREEVIGNNIDMLIP 62 A A++ + L + + ++ + + + L RE+VIG I L+P Sbjct: 341 QALAASERHLRAVVAALPDLIFLFDADGVIVDLWASQQDKLL--MPREQVIGRAIADLLP 398 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALV 122 L +I A++ E L DG +++ G LA+ Sbjct: 399 PSLTATALHHIARVLAEDAAQI----FEYTLPLPDGE----HGFEMRMARAGSREVLAIA 450 Query: 123 RDASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 RD + E + ++ L +AVD + D + A+ + Y ++ + Sbjct: 451 RDITAERDARAALQRSEASLRLAVDGSGDGLWDWDLITDKISFGAAYARLLRYPGNDLAR 510 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 P+ + ++ + + + GE W + D Sbjct: 511 DFRFRERLHPDDRDRSIAAVRNSIEYGTPFVATYRMRCFDGEYRWFQGRGMCHRDAHGTP 570 Query: 239 QNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESHVS 292 Q +D+T+ Q + S+ + + + R ++L + Sbjct: 571 QRFSGVLTDLTDRLQAEERLRLAAQVFDSTQEGVMITDARRRIVSVNRAFTTLLGYTETE 630 Query: 293 LFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGI---LQIKTSSGA 342 + L +G + A++ + W I R +DG+P + Sbjct: 631 VLGQTPRMLSSGRHDRDFYEAMQAQLDHTGLWQGEIWNRHKDGSPVPELLSISAVRDPHG 690 Query: 343 ETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA- 401 + + ++ DI+ ++S +E L DP+T LPNR +N LD + +A Sbjct: 691 QVTHYVGVFTDITH--------LKESEARLEFLAHHDPLTHLPNRLLFNNRLDQALHQAE 742 Query: 402 ---VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV 458 V L+ +D +D+ DS G+ D+ L V R ++L+ L R+ G +F L+ Sbjct: 743 REGRRLAVLLLDLDRFKDINDSYGHLAGDELLKYVAQRLTQRLRQSDTLARLGGDEFALL 802 Query: 459 SLE-NDVSNITQIADELRNVVSKPIMI-DDKPFPLTLSIGISY--DLGKNRDYLLSTAHN 514 + + ++A EL + +S+P + + +SIGI D G+ LL A Sbjct: 803 MHDLRHDDDAARLASELLSGLSEPWRSSEGVEVSVGVSIGICIYPDHGRTPQTLLQGADA 862 Query: 515 AMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYG 574 A+ + +G +++++ M + +ERL + A L+ A+++ QL L YQPQ+ +G + G Sbjct: 863 ALYRAKGDGRGVYRYYADEMTRIARERLHIEARLRRALADGQLLLHYQPQVDLRSGRIIG 922 Query: 575 IEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSV 634 EAL RW DP G +PP RFIP+AE G I IG WV+ EACRQ W + ++V Sbjct: 923 AEALVRWQDPEQGLIPPVRFIPVAEATGLIGEIGAWVLGEACRQARAWLDAGLPALTVAV 982 Query: 635 NLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGL 694 N+S F L QV + G+ L +E+TE +ME + E + +Q LR +GVG+ Sbjct: 983 NVSPRQFHQADLATQVMQVLVETGLPPTHLELELTEGALMEREAEALQVLQRLRGLGVGV 1042 Query: 695 SVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAE 754 ++DDFGTG+S L+ L P+ +KID+SF+ + + + AI ++G SL + V+AE Sbjct: 1043 AIDDFGTGYSSLASLKRFPIDVLKIDRSFITDIPDDPDDMEIAAAIIAMGHSLGILVLAE 1102 Query: 755 GVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPL 797 GVET EQ L++ +C QG+ SRPLPA+ + L Sbjct: 1103 GVETAEQLAFLQQRNCDRYQGFLRSRPLPAQAFEQLLREQASL 1145 Score = 138 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 83/250 (33%), Gaps = 10/250 (4%) Query: 24 GAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKAR 83 G L + + N ++ G EE + D A + + G R Sbjct: 72 GISLTALDGRLTEVNRRFAEIVGRTVEETQRLRFQDITHPDDLAADLDKVADLLAG---R 128 Query: 84 VEGMSRELQLEKKDGSKIWTRFALS--KVSAEGKVYYLALVRDASVEMAQK----EQTRQ 137 ++ E + + D S IW +S + + ++++V+D + + Q RQ Sbjct: 129 IDRYRMEKRYLRPDSSTIWVTLTVSLARGADGQPRQFISVVQDITAVKQAEGDLLRQRRQ 188 Query: 138 LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIR 197 L + + V V D + + N A + G +E G + + PE R Sbjct: 189 LQQIIQSIPDCVAVRDLDGRYLLANPAAERLIGLSEAEICGRTLEQIYPEPEAGQARRAD 248 Query: 198 LQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQL 257 L + + E G + +ISP+ + ++ D++ ER +L Sbjct: 249 RL-ALSQNGLVRREASYTAADGSVATVDLAISPLLGIDGRATGIISVGRDVSRERHNLRL 307 Query: 258 EGNILAAMCS 267 Sbjct: 308 LEQAHRRNHE 317 Score = 118 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 62/424 (14%), Positives = 113/424 (26%), Gaps = 82/424 (19%) Query: 20 QNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREG 79 + + + + NPAAE+L G E+ G ++ + P R Sbjct: 195 SIPDCVAVRDLDGRYLLANPAAERLIGLSEAEICGRTLEQIYPEPEAGQARRADRLAL-- 252 Query: 80 GKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYYLALVRDASVEM-------- 129 ++ + RE DGS A+S + +++ RD S E Sbjct: 253 --SQNGLVRREASYTAADGSVATVDLAISPLLGIDGRATGIISVGRDVSRERHNLRLLEQ 310 Query: 130 -------------------------------AQKEQTRQLIIAVDHLDRPVIVLDPERHI 158 A R L V L + + D + I Sbjct: 311 AHRRNHELLAEAERSRLALLSLLEDQQLGQQALAASERHLRAVVAALPDLIFLFDADGVI 370 Query: 159 VQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRT 218 V + + + G LL P A + ++L + A E+ L Sbjct: 371 VDLWASQQDKLLMPREQVIGRAIADLL-PPSLTATALHHIARVLAEDAAQIFEYTLPLPD 429 Query: 219 GEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI- 277 GE + A + ++ DIT ER R A++ + G Sbjct: 430 GE------HGFEMRMARAGSREVLAIARDITAERDARAALQRSEASLRLAVDGSGDGLWD 483 Query: 278 ---------ICRNIESVLNESHVSLFA--------LRNGMPIHWASSSHGAEIQNAQSWS 320 +L L + A+ + E + Sbjct: 484 WDLITDKISFGAAYARLLRYPGNDLARDFRFRERLHPDDRDRSIAAVRNSIEYGTPFVAT 543 Query: 321 ATIRQRDGAPAGIL---QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQ 377 +R DG + F + D++ ++ ++ + + Q Sbjct: 544 YRMRCFDGEYRWFQGRGMCHRDAHGTPQRFSGVLTDLT--------DRLQAEERLRLAAQ 595 Query: 378 -FDP 380 FD Sbjct: 596 VFDS 599 Score = 102 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 37/277 (13%), Positives = 88/277 (31%), Gaps = 29/277 (10%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 + R A + ++ +++ V + + + + + NR F E+ G + E ++ Sbjct: 45 IRRAARAQEQAEQAHKRVADVVADAAVGISLTALDGRLTEVNRRFAEIVGRTVEETQRLR 104 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 + + + AD L + R + E L IW+ ++S + Sbjct: 105 FQDITHPDDLAADLDKVADLLAGRIDRYRMEKRYLRPDSSTIWVTLTVSLARGADGQPRQ 164 Query: 241 LVMTFSDITEERQIR----QLEGNILAAMCSSPPFHEMGEIICR------NIESVLNESH 290 + DIT +Q + + + S P + ++ R E ++ S Sbjct: 165 FISVVQDITAVKQAEGDLLRQRRQLQQIIQSIPDCVAVRDLDGRYLLANPAAERLIGLSE 224 Query: 291 VSLFALR-NGMPIHWASSSHGAEIQNAQSWSATIRQ------RDGAPAGILQIKTS---S 340 + + + + A S + +R+ DG+ A + + Sbjct: 225 AEICGRTLEQIYPEPEAGQARRADRLALSQNGLVRREASYTAADGSVATVDLAISPLLGI 284 Query: 341 GAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQ 377 + I D+S +E+ + + Sbjct: 285 DGRATGIISVGRDVS---------RERHNLRLLEQAH 312 >UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5Q6_AZOSB Length = 828 Score = 865 bits (2235), Expect = 0.0, Method: Composition-based stats. Identities = 198/817 (24%), Positives = 345/817 (42%), Gaps = 41/817 (5%) Query: 11 DGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHP 70 G L+ + + N A GY + ++G ++ L P DL + Sbjct: 3 QGFLQNVLDAIPAPVFFKDAAGRYLGCNTAFLDFLGYTADRILGKSVFELSPPDLAARYH 62 Query: 71 EYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMA 130 + + +V ++Q + + ++ A + + + D + Sbjct: 63 AQDQALFDNPGEQV--YEAQVQNARGERREVVFYKATFHDTEGKVAGLVGTILDITDRKQ 120 Query: 131 QKEQTRQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 + + R+ L + L V + D E + N A +FG + G L + Sbjct: 121 AERRVRESEERLGALIQALPDAVFLKDGEGRWLVTNGAAQALFGLAERDWFGRTDLELGS 180 Query: 187 IPEFPADN---RIRLQQLLWKTARDQDEFLLL-TRTGEKIWIKASISPVYDVLAHLQNLV 242 A+ R +L+W+ + ++ G ++ +A+ P++D + + +V Sbjct: 181 EDPARAEVHAVCARNDELVWQQGGMRQMLEIVEDGQGRRLVFEATRIPLFDSVGQRKGIV 240 Query: 243 MTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESHVSLFA- 295 + DITE R + ++ + + + + + + Sbjct: 241 VVGRDITERRAAEERLRQAATVFDNTVEGISITDRDGIIQSVNPAFSRITGYAEAEVIGC 300 Query: 296 ----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG---ILQIKTSSGAETSA 346 L++G + + W I R++ G + E S Sbjct: 301 HTRILQSGRHGADYYRAMWRTLARTGQWQGEIWNRRKTGEVYPQWLTIGTVRDDEGEVSN 360 Query: 347 FIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS--- 403 ++ +DISQ + ++ +E+L +DP+TGLPNR L + L + +A Sbjct: 361 YVAVFSDISQI--------KDAQSQLERLAHYDPLTGLPNRALLGDRLAHAISRARRAGT 412 Query: 404 -PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN 462 V + +D ++V DSLG+ D+ L + R L+ + + R G +F +V + Sbjct: 413 SVAVLFLDLDGFKNVNDSLGHPAGDRLLQIIAERLCGALRSEGSVSRFGGDEFAVVLEDV 472 Query: 463 -DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYI 519 ++++A+ L +++P+ +D ++ SIGI+ G + L+ A AM Sbjct: 473 VRGEAVSEVAEHLIAEIARPLDLDGHGAHVSASIGIALFPRDGDDATTLIKAADTAMYRS 532 Query: 520 RKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALA 579 + G N + F M + RL L L++A+ + +L YQPQI TG L G EAL Sbjct: 533 KALGRNTFSFHHEDMAQAAHRRLSLEHGLRQALEQGRFELWYQPQIDLRTGVLAGAEALL 592 Query: 580 RWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSAL 639 RW DP G V P+ F+PLAEE G I IG WV+ EACR W + ++VN++A Sbjct: 593 RWRDPERGLVSPAEFVPLAEETGLILPIGLWVLEEACRAGRAWLDVGLAPGRIAVNVAAP 652 Query: 640 HFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDF 699 V+ + A G+ L VEITE ++ + LR +GVG+++DDF Sbjct: 653 QIERGGFDQAVARVLSASGLPPAALEVEITEGSLLRSAENARLAVAALRALGVGVAIDDF 712 Query: 700 GTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETK 759 GTG+S L+ L +L V +KID+ FV + LA+ AI ++ +SL VVAEGVE Sbjct: 713 GTGYSSLAYLKNLAVQTLKIDREFVRDLPHDAGNLAITRAIIAMCRSLGFGVVAEGVEEP 772 Query: 760 EQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLP 796 Q L C + QGY F++P+P E W+ + P Sbjct: 773 AQAAFLVSEGCTLAQGYLFAKPMPGAEFAEWLRTYRP 809 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 55/273 (20%), Positives = 101/273 (36%), Gaps = 12/273 (4%) Query: 1 MKLTDADNAADGI------FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIG 54 + +TD A + ++ L + + N AA+ L+G + G Sbjct: 113 LDITDRKQAERRVRESEERLGALIQALPDAVFLKDGEGRWLVTNGAAQALFGLAERDWFG 172 Query: 55 NNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV---- 110 L D A + + + GM + L++ +DG F +++ Sbjct: 173 RTDLELGSEDPARAEVHAVCARNDELVWQQGGMRQMLEIV-EDGQGRRLVFEATRIPLFD 231 Query: 111 SAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFG 170 S + + + RD + A +E+ RQ D+ + + D + I N AF+ + G Sbjct: 232 SVGQRKGIVVVGRDITERRAAEERLRQAATVFDNTVEGISITDRDGIIQSVNPAFSRITG 291 Query: 171 YCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISP 230 Y +E G +L AD + + L +T + Q E +TGE +I Sbjct: 292 YAEAEVIGCH-TRILQSGRHGADYYRAMWRTLARTGQWQGEIWNRRKTGEVYPQWLTIGT 350 Query: 231 VYDVLAHLQNLVMTFSDITEERQIRQLEGNILA 263 V D + N V FSDI++ + + + Sbjct: 351 VRDDEGEVSNYVAVFSDISQIKDAQSQLERLAH 383 Score = 108 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 57/171 (33%), Gaps = 12/171 (7%) Query: 2 KLTDADNAADGIFFPA---LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNID 58 +T+ AA+ A + + G + + + + NPA ++ GY EVIG + Sbjct: 245 DITER-RAAEERLRQAATVFDNTVEGISITDRDGIIQSVNPAFSRITGYAEAEVIGCHTR 303 Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV-- 116 +L H AR E+ +K G + V + Sbjct: 304 ILQSGR----HGADYYRAMWRTLARTGQWQGEIWNRRKTGEVYPQWLTIGTVRDDEGEVS 359 Query: 117 YYLALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIVQCNRAF 165 Y+A+ D S + Q +L + L ++ D H + R Sbjct: 360 NYVAVFSDISQIKDAQSQLERLAHYDPLTGLPNRALLGDRLAHAISRARRA 410 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 862 bits (2229), Expect = 0.0, Method: Composition-based stats. Identities = 191/818 (23%), Positives = 354/818 (43%), Gaps = 40/818 (4%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A+ + +F +E +G L+ + ++ N G + +IG+ + + Sbjct: 33 AEGLSAALFQSVVEALPVGTALL-RDGVIVHANATLAGQIGETIDTLIGSPLTSYLTPAD 91 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDA 125 A + + + R + GS+ S + + + RD Sbjct: 92 ALAVQKVVEGAIALH--GGVPVRRIAHIRHISGSERVYSLRFSPLDNGPHPLLVVITRDM 149 Query: 126 SVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 + ++A + R + ++ + P+ + N A ++GY Sbjct: 150 TAQVAAENALRAAEGKYRAIFENAVEGIYQSTPDGTYLDVNPALARIYGYASPAELIAHF 209 Query: 182 DTLLNIPEFPADNRIRLQQLLWKTARDQ-DEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 + + R Q+L+ +T + + G IWI + V + Sbjct: 210 TDIASQLYVDGTKRGEFQRLMRETGEVRDFTAEVWRCDGHTIWITENARCVRGPDNEVLY 269 Query: 241 LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNESHVSLF 294 T DIT +RQ ++ + S + E + E++ + Sbjct: 270 YEGTVEDITAQRQSQETMRLLGKVFTSIAEGIVLLERDLTVRTVNPAFEAMTGLLRQDME 329 Query: 295 ALR-----NGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG---ILQIKTSSGAET 344 +G+ + ++ AE+ A W I +R+G P + + ET Sbjct: 330 GRPARLFASGLHENDFLATVAAEVDRAGLWRGEIWGERREGPPYSGEMTVTAVRTRAGET 389 Query: 345 SAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP 404 + ++ + DI++ +++ +HI FD +T LPNR+ + + L+ + +A Sbjct: 390 THYVAAITDITK--------RKRDEEHIRFQANFDMLTHLPNRHLIMDRLEQAMHQAQRT 441 Query: 405 V----VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL 460 V + +D + + DS G++ D+ L R R ++ + R+ G +F+++ Sbjct: 442 GRQVCVMFLDLDRFKQINDSYGHSAGDEVLKLTARRLRNCVRISDSVGRLGGDEFIVILS 501 Query: 461 ENDVSNI-TQIADELRNVVSKPIMIDDKPFPLTLSIGIS--YDLGKNRDYLLSTAHNAMD 517 + + IA+++ +S+P I S+GI+ D G+ LL A AM Sbjct: 502 NVEDQHAGAYIAEKILYSLSEPFPIGGTEVFCIPSVGITYFPDHGETAPDLLRNADVAMY 561 Query: 518 YIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEA 577 + ++ G + F+P M L + + L+ A++ ++ +L +QP++ L G EA Sbjct: 562 HAKQGGERRYAIFTPDMARRSLALLTMESDLRHALARDEFELHFQPKVR-ADLTLIGAEA 620 Query: 578 LARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLS 637 L RW P G + P FIPLAEE G I IGRW + EAC ++ WR++ + IP++SVN+S Sbjct: 621 LIRWRHPEKGLINPGDFIPLAEESGLILPIGRWTLREACDRVMSWRAEGLTIPSVSVNVS 680 Query: 638 ALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVD 697 F+ L V + G++ L +EITE++M ++ L+D+GV LS+D Sbjct: 681 PRQFQDQTLVETVRQILVETGLEPEALDLEITETVMTGDVEHAVGTLRALKDLGVTLSID 740 Query: 698 DFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVE 757 DFGTG+S L+ L + P+ +KID++FV L + A++ I ++ ++L +VVAEGVE Sbjct: 741 DFGTGYSSLNYLKTFPIDTLKIDQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVE 800 Query: 758 TKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 EQ E L C+ QG+ +SRPLP E ++ + Sbjct: 801 EIEQAEFLGSRDCQNFQGFLYSRPLPPAEFTTFLRTAK 838 Score = 167 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 101/313 (32%), Gaps = 12/313 (3%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGY-KREEVIGNNIDMLIP 62 +A AA+G + E + G + + NPA +++GY E+I + + Sbjct: 156 ENALRAAEGKYRAIFENAVEGIYQSTPDGTYLDVNPALARIYGYASPAELIA-HFTDIAS 214 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS--AEGKVYYLA 120 + V + E+ + DG IW V +YY Sbjct: 215 QLYVDGTKRGEFQRLMRETGEVRDFTAEVW--RCDGHTIWITENARCVRGPDNEVLYYEG 272 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 V D + + +E R L + +++L+ + + N AF M G + G Sbjct: 273 TVEDITAQRQSQETMRLLGKVFTSIAEGIVLLERDLTVRTVNPAFEAMTGLLRQDMEGR- 331 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 P L D + + + + E R G + +++ V + Sbjct: 332 PARLFASGLHENDFLATVAAEVDRAGLWRGEIWGERREGPPYSGEMTVTAVRTRAGETTH 391 Query: 241 LVMTFSDITEERQIRQLEG-----NILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFA 295 V +DIT+ ++ + ++L + + + E + + V Sbjct: 392 YVAAITDITKRKRDEEHIRFQANFDMLTHLPNRHLIMDRLEQAMHQAQRTGRQVCVMFLD 451 Query: 296 LRNGMPIHWASSS 308 L I+ + Sbjct: 452 LDRFKQINDSYGH 464 >UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1G1_PELCD Length = 1061 Score = 858 bits (2219), Expect = 0.0, Method: Composition-based stats. Identities = 205/881 (23%), Positives = 360/881 (40%), Gaps = 108/881 (12%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML- 60 +++ A ++ AL+ + G +N M N + GY + N D + Sbjct: 193 QISKALQTSEERLRMALKASKQGLYDLNVQSGNMIVNAEYALILGYDPQNFRETNGDWIA 252 Query: 61 -IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRF---ALSKVSAEGKV 116 + + R A R+ G + E E + + G W + + + + Sbjct: 253 RMHPEDRSAVLAVYRNYLAG---KTEEFRAEFRQRTRCGQWKWVLSMGKIVERDTHGQPL 309 Query: 117 YYLALVRDASVEMAQKEQTRQ------------------LIIAVD--------------- 143 L D + +EQTR+ L + Sbjct: 310 RMLGTFSDITERRQSEEQTRKAEREKADLLEEAQQARLTLQRLFEEQTLASAEIERTSRL 369 Query: 144 -------HLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN---------- 186 + +I DP I NR +M GY E G + T+ + Sbjct: 370 LAEVLNAASEVSIIATDPRGIITVFNRGAEKMLGYSAEEMVGRETPTVFHLASELQTRYT 429 Query: 187 ----IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 P + + E+ ++ GE I + I+ + + + Sbjct: 430 ELGADRGTPIKDFADYMAHATTADAEHREWTYTSKQGEHISVSLVITAMRSPAHGIVGYL 489 Query: 243 MTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIIC---RNIESVLNESHVSLFALRNG 299 DITE ++ + + SP + + + SL + Sbjct: 490 GIAQDITERKRQENTLRKLSQVVEQSPTAVILTDPQGNIEYANPKFTQITGYSLTEVHGK 549 Query: 300 MPIHWASSS--------HGAEIQNAQSWSATI--RQRDGAPAGI---LQIKTSSGAETSA 346 P S I + W +++DG+ + + + S Sbjct: 550 NPRLLKSGETSAEEYRDLWTTITAGREWHGEFHNKRKDGSLFWEHASISPVRNDAGDISH 609 Query: 347 FIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVV 406 F+ DI+ ++++ + ++ L D +TGL NR L + L+ + A Sbjct: 610 FLAIKEDIT--------DRKRYEEQLQHLATHDNLTGLANRALLQDRLEQSILFAKRSG- 660 Query: 407 YLIGVDH-----------IQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF 455 + + DSLG+++ D+ L +R RE ++ + R+ G +F Sbjct: 661 ------RLVAALLLDLDRFKIINDSLGHSFGDRLLQIAADRLRESVRGADTVARLGGDEF 714 Query: 456 VLVS-LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTA 512 V++ + ++ ++A ++ + ++ P I D+ +T S+GIS G++ + L+ A Sbjct: 715 VILLAEVANEEDVGKVAKKILDRITAPFQIADREITVTASLGISIYPQDGEDEETLIRNA 774 Query: 513 HNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGEL 572 AM ++ G N ++ ++P MN +V E + + L+ A+ +L L YQP+I ++G++ Sbjct: 775 DIAMYQAKEEG-NAFRLYAPEMNIVVHEAMEMETDLRRALDRGELLLHYQPKIDLDSGKI 833 Query: 573 YGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPAL 632 G EAL RW P+ G + P FIPLAEE G I IG WV+ C Q+ W++Q + + Sbjct: 834 TGAEALVRWQHPVRGMIAPGMFIPLAEETGLILPIGEWVLENICLQIKSWQTQGFPLVPI 893 Query: 633 SVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGV 692 + NLSA FR+++L + + G+ H L +E+TESM+M + + +Q L +GV Sbjct: 894 AANLSARQFRNDELIATIQRILQDTGLPPHLLELELTESMIMRNVQTAAETMQELNALGV 953 Query: 693 GLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVV 752 L++DDFGTG+S L+ L PV +KID+SF+ + A+ +I +I SL L V Sbjct: 954 SLALDDFGTGYSSLNYLRRFPVDCLKIDRSFISDVADDPSAAAVATSIIAIAHSLGLQAV 1013 Query: 753 AEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 AEGVET+EQ E LR+ C QGY +S PL EE + Sbjct: 1014 AEGVETEEQLEFLRQCACDSYQGYLYSAPLAVEEFTAMLRQ 1054 Score = 90.4 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 92/357 (25%), Gaps = 76/357 (21%) Query: 87 MSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLD 146 ++ + +A L R + A + +L +A+ Sbjct: 156 WQTAFRVLHH--ISLPVLLIYPLATAMLGSLMLKRQRRDQISKALQTSEERLRMALKASK 213 Query: 147 RPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL--LNIPEFPADNRIRLQQLLWK 204 + + L+ + + N + + GY D + ++ + A + L K Sbjct: 214 QGLYDLNVQSGNMIVNAEYALILGYDPQNFRETNGDWIARMHPEDRSAVLAVYRNYLAGK 273 Query: 205 TARDQDEFLLLTRTGEKIWIKASISPV-YDVLAHLQNLVMTFSDITEERQIRQLEGNILA 263 T + EF TR G+ W+ + V D ++ TFSDITE RQ + Sbjct: 274 TEEFRAEFRQRTRCGQWKWVLSMGKIVERDTHGQPLRMLGTFSDITERRQSEEQTRKAER 333 Query: 264 ----------------------------------------AMCSSPPFHEMGE------I 277 +S + + Sbjct: 334 EKADLLEEAQQARLTLQRLFEEQTLASAEIERTSRLLAEVLNAASEVSIIATDPRGIITV 393 Query: 278 ICRNIESVLNESHVSL---------------------FALRNGMPIHWASSSHGAEIQN- 315 R E +L S + G PI + Sbjct: 394 FNRGAEKMLGYSAEEMVGRETPTVFHLASELQTRYTELGADRGTPIKDFADYMAHATTAD 453 Query: 316 AQSWSATIRQRDGAPAGILQIK---TSSGAETSAFIERVADISQHMAALALEQEKSR 369 A+ T + G + + S ++ DI++ ++ S+ Sbjct: 454 AEHREWTYTSKQGEHISVSLVITAMRSPAHGIVGYLGIAQDITERKRQENTLRKLSQ 510 >UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQI6_9GAMM Length = 955 Score = 857 bits (2216), Expect = 0.0, Method: Composition-based stats. Identities = 193/821 (23%), Positives = 353/821 (42%), Gaps = 47/821 (5%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 A ++ + +E + E++F N + KL+G E+++G+N LIP Sbjct: 141 EKALRESEQRYRGVVEDFPIMICTYKPGGEIIFVNQSYCKLFGRTSEDLVGSNFLDLIPE 200 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYYLAL 121 RPA + N G E ++ + W R+ + Y ++ Sbjct: 201 GDRPA----LISNISGLNTSKPTFVNEHRVILPGDNIGWQRWTNRAIFNRQGEIESYQSI 256 Query: 122 VRDASVE----MAQKEQTRQLIIAVDHLDRPVIVL--DPERHIVQCNRAFTEMFGYCISE 175 D + A + QL + +L + ++ + E+FGY Sbjct: 257 GEDITQRMIQERALESSEAQLSTLIGNLPGVAFQCLNNRNWTMLYLSDRCEEIFGYTAES 316 Query: 176 ASGMQPDTL--LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYD 233 + + L P + +Q L + + L +GE W++ V Sbjct: 317 LIKSRYCSYAQLIEPGYREYVWAAVQNSLKTQTPYKVLYKLKHSSGESRWMEEQGRGVST 376 Query: 234 VLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICR------NIESVLN 287 L + D+TE + A S+ + + + Sbjct: 377 DSTGLT-IEGYIEDVTERIEAENRLNQAAAVFRSTGEGVAITDQNGTIVDVNEAFTKITG 435 Query: 288 ESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG----ILQI 336 + L++G + +IQ W + R + G I I Sbjct: 436 FDRDEVIGKNTRILQSGKHDIAFYENMWEQIQKHGHWRGEVWNRAKSGTIYPEILTISAI 495 Query: 337 KTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDD 396 G + S ++ ADI+ +++ ++ L +D +T LPNR L Sbjct: 496 DFKKGQQPSGYVGVFADITS--------LKETEARLDHLAHYDALTELPNRLLFRERLIH 547 Query: 397 LVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEG 452 + + V + +D +++ D+LG+ D L E+ +R R ++ + RI G Sbjct: 548 SLLMSERKKTKVAVLFLDLDRFKNINDTLGHGVGDILLAEIASRLRHVVRMGDTVGRISG 607 Query: 453 TQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIG--ISYDLGKNRDYLL 509 +F L+ + DV+++ I +++ +V S+ I I+ ++ SIG IS D + D LL Sbjct: 608 DEFCLILEDIQDVTDVVPIVEKILSVFSQTIQINSHMLQISASIGVAISPDNSNDADALL 667 Query: 510 STAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAET 569 S + +AM ++ G N ++F++ M + E + +AL++A+ +Q + YQPQ+ + Sbjct: 668 SFSDSAMYEAKEAGRNTYKFYTAEMTQQALEHSFVQSALRDALEQSQFFVTYQPQLRIKD 727 Query: 570 GELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHI 629 + G+EAL RW P G +PP FIP+AE G I +G W++ AC Q +W ++ ++ Sbjct: 728 YSMVGVEALVRWQHPERGLIPPDSFIPIAENSGLIRELGAWILRTACEQGVQWLNEQVNF 787 Query: 630 PALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRD 689 + VN+SA V + G +L +E+TES +M+ + ++ Sbjct: 788 GRIYVNVSATQLHDESFTEAVIMCLKETGFPAEKLGLEVTESFIMKDPQHAINVLSSFKE 847 Query: 690 MGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNL 749 +G+ L++DDFGTG+S LS L LP+ ++KID+SF+ + +A+ EA+ ++G++LNL Sbjct: 848 IGIELAIDDFGTGYSSLSYLKQLPIDKLKIDQSFIRDIPDDPNDMAIAEAVIAMGKALNL 907 Query: 750 TVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 V+AEGVE++ Q + L C +QGY ++ PL A+ W Sbjct: 908 EVIAEGVESQIQADFLLDKECTEVQGYLYAHPLTADAFSEW 948 Score = 137 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 60/410 (14%), Positives = 131/410 (31%), Gaps = 49/410 (11%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 K + + +F + ++ + V+ N A GY RE+ +G Sbjct: 9 KFLEKLKNSSDLFEIVFDHQFQFMAILEPDGRVISVNQVALSQQGYTREDFVGRYFWESA 68 Query: 62 PRDLRPAHPEYIR--HNREGGKARVEGMSRELQLEKKDGSKIWTR-FALSKVSAEGKV-Y 117 P E I + + R + ++ E DGS ++ ++GK+ Sbjct: 69 SWRHLP-DWEAIWKKRLKAAYENRSPIFTDDV-YEAHDGSIRHADAVTIALFDSDGKLNG 126 Query: 118 YLALVRDAS----VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCI 173 YL D + E A +E ++ V+ + P I+ N+++ ++FG Sbjct: 127 YLIQAIDKTDKAIAEKALRESEQRYRGVVEDFPIMICTYKPGGEIIFVNQSYCKLFGRTS 186 Query: 174 SEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYD 233 + G L+ + PA + L +E ++ W + + +++ Sbjct: 187 EDLVGSNFLDLIPEGDRPALISN-ISGLNTSKPTFVNEHRVILPGDNIGWQRWTNRAIFN 245 Query: 234 VLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSP---PFHEMGEIICRNIESV-LNES 289 +++ DIT+ + + A + + P + RN + L++ Sbjct: 246 RQGEIESYQSIGEDITQRMIQERALESSEAQLSTLIGNLPGVAFQCLNNRNWTMLYLSDR 305 Query: 290 HVSLFALRNGMPIHWASSSH------------GAEIQNAQSWSAT------IRQRDGAPA 331 +F I S+ A +QN+ ++ G Sbjct: 306 CEEIFGYTAESLIKSRYCSYAQLIEPGYREYVWAAVQNSLKTQTPYKVLYKLKHSSGESR 365 Query: 332 GIL-----QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLI 376 + S+G +I D++ E+ ++ + Q Sbjct: 366 WMEEQGRGVSTDSTGLTIEGYI---EDVT--------ERIEAENRLNQAA 404 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 857 bits (2215), Expect = 0.0, Method: Composition-based stats. Identities = 209/903 (23%), Positives = 360/903 (39%), Gaps = 122/903 (13%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML-IPR 63 + + ++ + ++ + V+ N A + + + EEV+G + Sbjct: 55 ENLKQEEQGLKDYIDNLITLNAKLSTDGTVLLINETALRTFHMQPEEVVGKKLWDTPWWS 114 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYYLAL 121 H + ++ + + E G KI+ F L+ V +Y +A Sbjct: 115 YDADLHTQLKNAVKQAAT--GQTIYYETINHLVSGKKIYIYFTLNPVLNKNNEVIYLVAE 172 Query: 122 VRDASVEMAQKEQT--------------------------------RQLIIAVDHLDRPV 149 RD + ++ +L ++ + Sbjct: 173 GRDITKRKMIEQDLISTNQELVAANEELISIEEELRISNKEIYLAHERLNNILESITDAF 232 Query: 150 IVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQ 209 ++ + + N ++ + G L Q++ + Q Sbjct: 233 YAVNHQWEVTYVNTEAEKLLHKKRLDIIGKNIWQEF-SEMVHTKFYHILHQVMSEQIYQQ 291 Query: 210 DEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITE----------ERQIRQLEG 259 E+ TG+ W P D L + F DITE + Q Sbjct: 292 FEYFFQ-PTGK--WFNIHAYPSSD------GLSIYFHDITEYKLVQEKMSLQNQYLSSLH 342 Query: 260 NILAAMCSSPPFHEMGEIICR-------------------------------NIESVLNE 288 A+ + E+ + I + ++ Sbjct: 343 ETTLALMNRLNLDELLKAIVTRSAELSGTDHGFIFLIDNNNPSELVLRFGTGTYKQMVGI 402 Query: 289 SHVSLFALRN-----GMPIHWASSSHG---AEIQNAQSWSATI---RQRDGAPAGILQIK 337 + G P+ S + I + I + +G GIL I Sbjct: 403 RLKPGEGMVGTVWQTGEPLIVKDYSSWPGKSSIFSHIKIHGGIALPLKSEGKINGILGII 462 Query: 338 TSSGAE------------TSAFIERVAD---ISQHMAALALEQEKSRQHIEQLIQFDPMT 382 + + D + Q E+++ + + L D +T Sbjct: 463 YIEKNQNLESNNLSLLTGFAQLASIALDNANLYQAAQQELAERKRIEEILRYLAYHDSLT 522 Query: 383 GLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFR 438 LPNR ++ L +++A V + +DH + V D+LG+ DQ L + RF Sbjct: 523 ELPNRTLFNDRLSMALNQAHRNKNKLAVMFLDLDHFKKVNDTLGHDIGDQLLKGIAQRFS 582 Query: 439 EKLKPDQYLCRIEGTQFVLVS-LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGI 497 + L+ + RI G +F ++ N + +AD++ + ++ P +I + F +T SIGI Sbjct: 583 KLLRKGDTIARIGGDEFTILLHNITRAENASIVADKIIDTLANPWIIGNHEFHITTSIGI 642 Query: 498 SY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNN 555 + D G + + LL A AM ++ G N +QF++P MN R L L+ A+ Sbjct: 643 ALYPDDGTDAESLLKNADAAMYQAKEMGRNNYQFYTPTMNAQTLRRFELENNLRRALDRK 702 Query: 556 QLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEA 615 + + YQPQ+ TG++ G+EAL RW P G + P+ FIP+AEE G I IG W++ A Sbjct: 703 EFVIYYQPQVEIHTGKIVGVEALIRWQHPQRGMISPAEFIPMAEETGLIIPIGEWILRRA 762 Query: 616 CRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMME 675 C Q W+ + ++VNLSA F LP +S+ + G+ L +EITES+ M+ Sbjct: 763 CAQNKAWQDRGFSPMRVTVNLSARQFLQPHLPQYISNVLEDTGLGPQWLELEITESLAMK 822 Query: 676 HDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILA 735 K + LR MG+ L++DDFGTG+S L+ L LP+ +KID+SF+ TE +A Sbjct: 823 DVAFTEKTLIELRKMGITLAIDDFGTGYSSLNYLKRLPIDILKIDRSFIHDLNTESDDVA 882 Query: 736 LLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPG-WMSSV 794 ++ AI ++G +L + VVAEGVETKEQ LR+ C ++QGY F++PLP E+ ++S+ Sbjct: 883 IISAIITLGHNLKMKVVAEGVETKEQLMFLRQQQCDLMQGYLFTKPLPVRELEQKYLSNN 942 Query: 795 LPL 797 L Sbjct: 943 TKL 945 Score = 62.7 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 60/164 (36%), Gaps = 4/164 (2%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 + + S K++ + L +D+L L + ++ N F E G + Sbjct: 47 ITTEVSSLENLKQEEQGLKDYIDNLITLNAKLSTDGTVLLINETALRTFHMQPEEVVGKK 106 Query: 181 PDTLLNIPEFPADNRIRLQQLLWK---TARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 + AD +L+ + + E + +G+KI+I +++PV + Sbjct: 107 LWD-TPWWSYDADLHTQLKNAVKQAATGQTIYYETINHLVSGKKIYIYFTLNPVLNKNNE 165 Query: 238 LQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRN 281 + LV DIT+ + I Q + + ++ E R Sbjct: 166 VIYLVAEGRDITKRKMIEQDLISTNQELVAANEELISIEEELRI 209 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 855 bits (2211), Expect = 0.0, Method: Composition-based stats. Identities = 192/827 (23%), Positives = 343/827 (41%), Gaps = 52/827 (6%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML- 60 + T A + A +G+ + + + + ++ G V + M Sbjct: 197 QRTAELQAREADLNRAQAVANVGSWVYDLVSGRIDMSAETCRILGLPTGTVGSLDAFMAR 256 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWT--RFALSKVSAEGKVYY 118 + D R R E EL+L + + W R + + Sbjct: 257 VHPDDR-----DTLQQAAAAALRGEPFDNELRLVFGE-TTRWITQRAEVEFDEEGKPLRS 310 Query: 119 LALVRDASVEMAQKEQTRQLIIAV----DHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS 174 L +D + + R+ + + + VLD + + + ++ + FG Sbjct: 311 LGTTQDITARKQLEASLREQKEFFRLISESIGEHIAVLDLQGQRLYNSPSYGQFFGDTR- 369 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 + G ++ + R +Q + E+ L+ G + ++ + D Sbjct: 370 DLRGSDSFADVHPEDRERVKR-VFRQTTETGRGQEIEYRLVRNDGSVRHMASAGRVLGDR 428 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNILAAMC--SSPPFHEMGEIICRNIESVLNESHVS 292 +V+ D+TE +Q Q E A + +I R ++ + + + Sbjct: 429 QGEAARVVVVSRDVTERKQAEQWERIAATAFESQQGMFITDANAVILRVNQAFTDITGYA 488 Query: 293 LFALRNGMPIHWASSSHGAEIQ--------NAQSWSATI--RQRDGAPAGIL---QIKTS 339 P +S H A W I R+++G Sbjct: 489 ADECIGQTPKLLSSGRHDASFYAAMRESIERNGVWQGEIWNRRKNGDVFPEWLTISSVRD 548 Query: 340 SGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD 399 + ++ + D+S H + +++ I L +D +TGLPNR LH+ L + Sbjct: 549 GDGVVTHYVSALTDMSAH--------KAAQEEIRHLAFYDALTGLPNRRLLHDRLRVAIA 600 Query: 400 KA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF 455 + + I +D+ + + D+LG+ D+ L +V R ++ + R+ G +F Sbjct: 601 SSVRSERQGALLFIDLDNFKTLNDTLGHDMGDRLLQQVGQRLSSSVREGDTVARLGGDEF 660 Query: 456 VLVSLEND--VSNIT----QIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGKNR--DY 507 V++ + +++ ++++P + + T S+GI+ G+ D Sbjct: 661 VVMLENLGERPEEAAGQSRIVGEKIIKLLNRPYDLSGHDYHNTPSVGITLFGGQQVGIDE 720 Query: 508 LLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFA 567 L+ A AM + +G N +FF P M +V R + L+ A+ L YQPQ+ Sbjct: 721 LMKRADLAMYEAKASGRNALRFFDPRMQAVVTARADIEKDLRAAVGRQSFFLAYQPQVD- 779 Query: 568 ETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ-N 626 +G++ G EAL RW G V P+ FIP+AEE G I +G WV+ AC Q A W ++ Sbjct: 780 ASGQVIGAEALLRWQHQQRGTVSPAEFIPVAEETGLILPLGLWVLETACAQAALWAARPG 839 Query: 627 IHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQI 686 +SVN+SA FR +QV + G L +E+TESM++++ +I ++ Sbjct: 840 RERFTVSVNVSARQFRQANFVDQVLAVLARSGAHPRNLKLELTESMLLDNVQDIIAKMSA 899 Query: 687 LRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQS 746 L+ GVG S+DDFGTG+S LS L LP+ ++KID+SFV LT+ + I ++ ++ Sbjct: 900 LKARGVGFSLDDFGTGYSSLSYLKQLPLDQLKIDQSFVRDLLTDPNDEVIARTIIALART 959 Query: 747 LNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 L L+V+AEGVE+ EQ + L C QGY FSRPL + ++ Sbjct: 960 LGLSVIAEGVESVEQQDALAAQGCLAYQGYLFSRPLALADFEAFLRR 1006 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 853 bits (2206), Expect = 0.0, Method: Composition-based stats. Identities = 176/691 (25%), Positives = 316/691 (45%), Gaps = 38/691 (5%) Query: 128 EMAQKEQTRQLIIAVDHLDRPVIVL----DPERHIVQCNRAFTEMFGYCISEAS--GMQP 181 E +++E +L D L + D + A E++ + + + Sbjct: 779 EASRQEALDRLQKIADRLPGVIYQFRLMPDGTSSFPFASDALYEIYRVKPEDVTEDSSKV 838 Query: 182 DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNL 241 +++ + D + +++ E+ + + + W+ + P + Sbjct: 839 FEVIHPEDVD-DVQKSIEESAEHLTPWYQEYRVRFKNDDVRWLSGNAMPEKQPDGSILWH 897 Query: 242 VMTFSDITEERQIRQLEGNILAAMCSS---PPFHEMGEIICRNIESVLNESHVSLFALRN 298 +DI++ ++ S + + I E+ S S+ Sbjct: 898 -GFITDISQHKKTEAQIELASKVFEQSREGIMITDSNQKILMVNEAFSEISGYSVEETLG 956 Query: 299 GMPIHWASSSH--------GAEIQNAQSWSATI--RQRDGAPAGILQIKT---SSGAETS 345 P AS H I+ W I R+++G + + + Sbjct: 957 KTPRMLASGRHSREFYQNVWKSIKEKGHWQGEIWNRRKNGEIFPEWLSISRGLDTSGNVT 1016 Query: 346 AFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS-- 403 ++ DIS+ ++S + I+ L +DP+TGL NR L + L+ + A Sbjct: 1017 EYVGIFNDISKV--------KESEEKIKHLAHYDPLTGLVNRELLMDRLNHSISTADRNN 1068 Query: 404 --PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE 461 + I +DH ++V D+LG+ DQ L+EV R + L+ + + R G +F++V + Sbjct: 1069 TPLALLFIDLDHFKNVNDTLGHQVGDQLLIEVGQRILKILRDEDTIARQGGDEFIVVLPD 1128 Query: 462 NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYI 519 + +A+++ +S + + +T SIGI+ GK+ D LL A AM Sbjct: 1129 TGENGAVHVAEKILESISDQLNLKPYKLFITPSIGIAVYPQDGKDADSLLKNADTAMYQA 1188 Query: 520 RKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALA 579 + +G N ++FF+ M + + +AL+ A+ + Q +L YQPQ A++G + G+EAL Sbjct: 1189 KNDGRNVYRFFTMEMQAHSSRIMQIESALRVALFDQQFELYYQPQTCAKSGSIIGVEALI 1248 Query: 580 RWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSAL 639 RW+ P G V P FIP+AE+ G+I IG WV+ A RQ+ W ++VNLSA+ Sbjct: 1249 RWNHPEMGPVSPQEFIPVAEQSGQILAIGWWVLRTAIRQIKIWSEHGKPCIKVAVNLSAV 1308 Query: 640 HFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDF 699 FR LP QV + G+ L +E+TES+ M + + + + L G+ +S+DDF Sbjct: 1309 QFRYEDLPKQVMKILEEEGVSPEFLELELTESVAMANPEAVIEMMDKLVGHGIKMSIDDF 1368 Query: 700 GTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETK 759 GTG+S LS L V+++KID+SF+ + +++EAI S+ ++L L +AEGVET+ Sbjct: 1369 GTGYSSLSYLKRFKVSKLKIDQSFIRDLAVDSDDRSIIEAIISLSKALGLKTIAEGVETQ 1428 Query: 760 EQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 Q + L++ C IQG+++S+ L E + Sbjct: 1429 AQLDFLQEKQCDEIQGFYYSKALTPEAFDAF 1459 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 39/268 (14%), Positives = 93/268 (34%), Gaps = 12/268 (4%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLI----NENDEVMFFNPAAEKLWGYKREEVI--GNN 56 + + A ++ + F + A +++ K E+V + Sbjct: 778 IEASRQEALDRLQKIADRLPGVIYQFRLMPDGTSSFPFASDALYEIYRVKPEDVTEDSSK 837 Query: 57 IDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA-EGK 115 + +I + + ++ + E + +E ++ K+ W +G Sbjct: 838 VFEVIHPEDV----DDVQKSIEESAEHLTPWYQEYRVRFKNDDVRWLSGNAMPEKQPDGS 893 Query: 116 VYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 + + + D S + Q + +++ D + I+ N AF+E+ GY + E Sbjct: 894 ILWHGFITDISQHKKTEAQIELASKVFEQSREGIMITDSNQKILMVNEAFSEISGYSVEE 953 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL 235 G P +L + + + + + Q E + GE SIS D Sbjct: 954 TLGKTP-RMLASGRHSREFYQNVWKSIKEKGHWQGEIWNRRKNGEIFPEWLSISRGLDTS 1012 Query: 236 AHLQNLVMTFSDITEERQIRQLEGNILA 263 ++ V F+DI++ ++ + ++ Sbjct: 1013 GNVTEYVGIFNDISKVKESEEKIKHLAH 1040 Score = 137 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 52/319 (16%), Positives = 109/319 (34%), Gaps = 13/319 (4%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINEND-EVMFFNPAAEKLWGYKREEVIGNNIDM 59 ++ A+ + E +G +++ + + FN K+ Y +++ + + Sbjct: 339 LERYAEKTEAEKVLQKFYELPFIGMAILDAQHDKWIRFNDRLPKILRYSSQDLAQKSFNE 398 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VY 117 +I E + + EG + EL L D S ++ + V E Y Sbjct: 399 IIHPKD---LAEVNAQLTDIESGKSEGFTTELHLLASDDSIVFGTINVKCVRGENGRVQY 455 Query: 118 YLALVRDASVEMAQKE----QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCI 173 YL V+D + E QL V + V + D E + CN +F FG Sbjct: 456 YLMTVQDVTELKHLAELNIEHQNQLNALVHTIPDLVWLKDTEGLYLACNPSFERFFGAKE 515 Query: 174 SEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYD 233 ++ G ++ + + + + +E+L + G + +P+ + Sbjct: 516 ADIIGKTDYDFVDKALADFFRENDCNAMAAEESIENEEWLTFSENGYRGLFSTIKTPMKN 575 Query: 234 VLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSL 293 + +V DI++ ++ + + E I R+ + + S V Sbjct: 576 EEGQVIGVVGVARDISKRKEDEAQLERLTKLYSAMNHT---NEAIIRSTDQLTLFSKVCE 632 Query: 294 FALRNGMPIHWASSSHGAE 312 A+R G + E Sbjct: 633 IAVREGGMKMAWIGTIDKE 651 Score = 87.3 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 96/304 (31%), Gaps = 36/304 (11%) Query: 100 KIW-TRFALSKVSAEGKVYYLALVRDASVEMAQK-----EQTRQLIIAVDHLDRPVIVLD 153 W + S + G + + L ++ +++ ++ E + L + + +LD Sbjct: 308 VFWIVLVSFSALFLIGIAFLIVLKKERDLQVLERYAEKTEAEKVLQKFYELPFIGMAILD 367 Query: 154 PER-HIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEF 212 + ++ N ++ Y + + + +++ + N K+ E Sbjct: 368 AQHDKWIRFNDRLPKILRYSSQDLAQKSFNEIIHPKDLAEVNAQLTDIESGKSEGFTTEL 427 Query: 213 LLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQ----LEGNILAAMCSS 268 LL ++ ++ V +Q +MT D+TE + + + + + A + + Sbjct: 428 HLLASDDSIVFGTINVKCVRGENGRVQYYLMTVQDVTELKHLAELNIEHQNQLNALVHTI 487 Query: 269 PPFHEMGEIIC------RNIESVLNESHVSLFALRNGM-----PIHWASSSHGAEIQNAQ 317 P + + + E + + + + + + Sbjct: 488 PDLVWLKDTEGLYLACNPSFERFFGAKEADIIGKTDYDFVDKALADFFRENDCNAMAAEE 547 Query: 318 SWSAT---IRQRDGAPAGILQIKT---SSGAETSAFIERVADISQHMAALALEQEKSRQH 371 S +G IKT + + + DIS+ +++ Sbjct: 548 SIENEEWLTFSENGYRGLFSTIKTPMKNEEGQVIGVVGVARDISK--------RKEDEAQ 599 Query: 372 IEQL 375 +E+L Sbjct: 600 LERL 603 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 853 bits (2205), Expect = 0.0, Method: Composition-based stats. Identities = 207/823 (25%), Positives = 347/823 (42%), Gaps = 62/823 (7%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEV-IGNNIDMLIP-----RDLRP 67 + G + +E + +N + E V G + L+ + P Sbjct: 21 LQAVVSNMPQGISVFDEQLRLRVWNQGFINVLNLPPEIVYEGVHFSELVRVPAQRGEYGP 80 Query: 68 AHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASV 127 PE + E S E + +G+ + + V ++ D + Sbjct: 81 GEPEAHVERITALANKFEAHSFERT--RPNGNTHLVQGE-PLFIDQQLVGFITTYTDITD 137 Query: 128 EMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS-GMQPD 182 A + R QL ++ + V + D ++V N AF + A G+ + Sbjct: 138 RKAAETALRTQHNQLQTVIESIPSAVSLFDSAGNLVLFNTAFPRLLDVPAELAKPGVSME 197 Query: 183 TLLN--------IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 TL P P L + + E G+ ++ P+ + Sbjct: 198 TLFRFNAMRGEYGPGDPEKIVATLMERAKNPSHHYFERT--RPNGKT--LEVRGVPLAEG 253 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNE 288 V ++DI+E R + E +P + I + Sbjct: 254 -----GFVTVYTDISERRASAEREQLAQKVYSHTPAGIIFTDDQHRILSINPATTEMTGY 308 Query: 289 SHVSLFALRNGMPIHWASSSHGAEIQN----AQSW--SATIRQRDGAPAG----ILQIKT 338 L I + Q SW + Q++G+ I ++ Sbjct: 309 EPFELIGQTVFGLISLDEGISQKDFQEQISMRGSWSSELEVTQKNGSNFPAGARINRVDD 368 Query: 339 SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV 398 + ++ +ADI+ E++++ + + Q D +TGLPNR L L L+ Sbjct: 369 PQSGLPAHYVWILADIT--------ERKQAEDRMRHIAQHDALTGLPNRLALLMRLAQLL 420 Query: 399 DKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQ 454 +A V I +D + + D+LG+ D+ L EV R L+ ++ R+ G + Sbjct: 421 PEARRHGWTVAVMFIDLDRFKIINDTLGHQVGDEMLREVACRLSNLLRETDFVARLGGDE 480 Query: 455 FVLVSL-ENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLST 511 FV++ + ++ ++ ++ + +S I + + SIGIS G + D +L Sbjct: 481 FVIILPSISSPADAAIVSGKIISALSTAIEAEGHELHTSPSIGISIFPDDGPDGDIVLKN 540 Query: 512 AHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGE 571 A AM + + G N +QFF+ MN ERL + L+ AI+ N+L LV+QPQ AE Sbjct: 541 ADTAMYHAKAAGRNNYQFFAADMNRTAAERLNIERKLRHAIARNELSLVFQPQFRAEDTT 600 Query: 572 LYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPA 631 G+EAL RWH P G + P+RFIP+AEE G I IG WV+A AC ++A W + + Sbjct: 601 PTGVEALLRWHHPTDGMISPARFIPVAEETGMIVEIGDWVLATACHEMARWINAGLKPLR 660 Query: 632 LSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMG 691 ++VN+SA R V++A+ G+ L +EITES +ME+ E ++ L MG Sbjct: 661 IAVNVSARQLRRRDFCETVANALTTSGLPAELLELEITESSVMENPQEAIHILERLGRMG 720 Query: 692 VGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTV 751 V L++DDFGTG+S L+ L P+ +KID+SFV + A+ ++ SL L V Sbjct: 721 VTLAIDDFGTGYSSLAYLKLFPIDHLKIDRSFVADIEHDLNDRAIAFGTIALAHSLGLNV 780 Query: 752 VAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 +AEGVET++Q E+LR C +QG+ FS+PL ++ + Sbjct: 781 IAEGVETEDQHELLRANGCDEVQGFLFSKPLTGAAAFAFLHAR 823 Score = 133 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 85/268 (31%), Gaps = 16/268 (5%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVI-GNNIDMLI- 61 A +E L + ++ FN A +L E G +++ L Sbjct: 142 ETALRTQHNQLQTVIESIPSAVSLFDSAGNLVLFNTAFPRLLDVPAELAKPGVSMETLFR 201 Query: 62 ----PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVY 117 + P PE I E + +G ++ G Sbjct: 202 FNAMRGEYGPGDPEKIVATLMERAKNPSHHYFERT--RPNGKT--LEVRGVPLAEGG--- 254 Query: 118 YLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 ++ + D S A E+ + H +I D + I+ N A TEM GY E Sbjct: 255 FVTVYTDISERRASAEREQLAQKVYSHTPAGIIFTDDQHRILSINPATTEMTGYEPFELI 314 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL-A 236 G L+++ E ++ Q+ + E + + G A I+ V D Sbjct: 315 GQTVFGLISLDE--GISQKDFQEQISMRGSWSSELEVTQKNGSNFPAGARINRVDDPQSG 372 Query: 237 HLQNLVMTFSDITEERQIRQLEGNILAA 264 + V +DITE +Q +I Sbjct: 373 LPAHYVWILADITERKQAEDRMRHIAQH 400 Score = 93.9 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 63/160 (39%), Gaps = 10/160 (6%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 A + + G + ++ ++ NPA ++ GY+ E+IG + LI D Sbjct: 266 RASAEREQLAQKVYSHTPAGIIFTDDQHRILSINPATTEMTGYEPFELIGQTVFGLISLD 325 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA---EGKVYYLAL 121 + + + + + S EL++ +K+GS +++V +Y+ + Sbjct: 326 EGIS-----QKDFQEQISMRGSWSSELEVTQKNGSNFPAGARINRVDDPQSGLPAHYVWI 380 Query: 122 VRDASVEMAQKEQTRQ--LIIAVDHLDRPVIVLDPERHIV 159 + D + +++ R A+ L + +L ++ Sbjct: 381 LADITERKQAEDRMRHIAQHDALTGLPNRLALLMRLAQLL 420 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 852 bits (2202), Expect = 0.0, Method: Composition-based stats. Identities = 209/805 (25%), Positives = 350/805 (43%), Gaps = 42/805 (5%) Query: 17 ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHN 76 + + L + + + N A + G E ++G + + + E + Sbjct: 1 MVNHSPTMMSLKDMDGRYLLVNAAYARRVGVSAESLLGRRPEDVFDAEDARQIREQDQQV 60 Query: 77 REGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKVYYLA-----LVRDASVEMA 130 R L +G + + + + A+G+ + + + + A Sbjct: 61 LNLLSPRQFDEHFVL-----NGVETYLLASKFPLFDADGRPAGVGSVDTDITQARQEQKA 115 Query: 131 QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEF 190 ++E + + V+ + ++ + + N E+ GY E GM LL E Sbjct: 116 KREAEDRYLALVEQSLVGIYIM-QDEKLAYVNPKLAEIMGYQPEEMEGMTMPQLLVPGEA 174 Query: 191 PADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITE 250 + L++ + L + G + ++ L + ++ DI+E Sbjct: 175 ERLRQQLLRRFRDNISVMHYATRGLRKDGVLVDMEVHSRLF--ELNGRKAVIGVVMDISE 232 Query: 251 ERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESHVSLFALRNGM--PI 302 +S + + + + + + + Sbjct: 233 RLLADTNLRLAAKVFENSAEGILILDAGARIIAVNDAFTRITGYAEEEALGKASRIFSAE 292 Query: 303 HWASSSHGAEIQNAQSWSATI--RQRDGAPAGI---LQIKTSSGAETSAFIERVADISQH 357 A ++ + + W + R++ G + S ++ +DI+Q Sbjct: 293 QQARAAMQQALADCGHWQGEMLDRRKGGQWYPAELSISALRDEDGLLSNYVAVFSDITQ- 351 Query: 358 MAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV----SPVVYLIGVDH 413 ++++ + ++ L DP+T LPNR+ L LD+ + + V I +D Sbjct: 352 -------RKEAEERLQFLANHDPLTRLPNRSRLTASLDEALTRMDGEDGRLAVMFIDLDR 404 Query: 414 IQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVS-NITQIAD 472 + + DS G+ DQ L E+ R + L R+ G +F L+ D + +A Sbjct: 405 FKLINDSFGHQVGDQLLCEIAIRLSRVVGERGMLARLGGDEFTLLMSGFDSHHQLADMAS 464 Query: 473 ELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFF 530 ++ + KP+ ++ +T SIGIS G++ LL A AM ++ G N +QFF Sbjct: 465 DILAALGKPLCLEAHEVFITGSIGISVFPHDGRDARTLLKNADVAMYRAKEAGKNTYQFF 524 Query: 531 SPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVP 590 MN ERL+L L+ A+ ++ +L YQPQ+ A L G EAL RW P G VP Sbjct: 525 DIGMNTQTFERLLLENGLRMALERHEFELHYQPQLSAGERALAGAEALLRWRHPQLGLVP 584 Query: 591 PSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQV 650 P+RFI LAEE G I+ IG WV+ EACRQLA W +Q + +P L+VNLS F LP +V Sbjct: 585 PARFIALAEETGLIKPIGDWVLREACRQLAAWDAQGLRVPRLAVNLSPRQFGQPSLPAKV 644 Query: 651 SDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLV 710 + A+ A G+ +L +EITESM+M+ TE + L+ +GV LS+DDFGTG+S LS L Sbjct: 645 AGALQAAGLAAGRLELEITESMIMQSPTEAVSLLSELKSLGVWLSIDDFGTGYSSLSHLK 704 Query: 711 SLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHC 770 P+ +KID+SFV+ + A+ EAI ++ + L VVAEGVE++EQ L C Sbjct: 705 RFPLDTLKIDQSFVEGLPDDDDNAAIAEAILAMAKKLKFQVVAEGVESEEQAAFLEGKGC 764 Query: 771 RVIQGYFFSRPLPAEEIPGWMSSVL 795 V+QGY F RPLPA E + Sbjct: 765 HVLQGYHFGRPLPAGEFAALAAGWR 789 Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 99/254 (38%), Gaps = 8/254 (3%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A A+ + +EQ+++G ++ +++++ + NP ++ GY+ EE+ G + L+ Sbjct: 115 AKREAEDRYLALVEQSLVGIYIM-QDEKLAYVNPKLAEIMGYQPEEMEGMTMPQLLVPGE 173 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDA 125 + + + M + +KDG + G+ + +V D Sbjct: 174 AE---RLRQQLLRRFRDNISVMHYATRGLRKDGVLVDMEVHSRLFELNGRKAVIGVVMDI 230 Query: 126 SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 S + R ++ +++LD I+ N AFT + GY EA G + Sbjct: 231 SERLLADTNLRLAAKVFENSAEGILILDAGARIIAVNDAFTRITGYAEEEALGK-ASRIF 289 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 + + + Q E L + G+ + SIS + D L N V F Sbjct: 290 SAEQQARAAMQQAL---ADCGHWQGEMLDRRKGGQWYPAELSISALRDEDGLLSNYVAVF 346 Query: 246 SDITEERQIRQLEG 259 SDIT+ ++ + Sbjct: 347 SDITQRKEAEERLQ 360 Score = 96.6 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 54/142 (38%), Gaps = 11/142 (7%) Query: 1 MKLTDADNAADGIFFPA--LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNID 58 M +++ A + A E + G ++++ ++ N A ++ GY EE +G Sbjct: 228 MDISERLLADTNLRLAAKVFENSAEGILILDAGARIIAVNDAFTRITGYAEEEALGKASR 287 Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVY- 117 + + + R + A E+ +K G ++S + E + Sbjct: 288 IF-------SAEQQARAAMQQALADCGHWQGEMLDRRKGGQWYPAELSISALRDEDGLLS 340 Query: 118 -YLALVRDASVEMAQKEQTRQL 138 Y+A+ D + +E+ + L Sbjct: 341 NYVAVFSDITQRKEAEERLQFL 362 >UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria RepID=Q88QU8_PSEPK Length = 1247 Score = 851 bits (2200), Expect = 0.0, Method: Composition-based stats. Identities = 194/825 (23%), Positives = 344/825 (41%), Gaps = 46/825 (5%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINE-NDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 + DA ++ F +Q ++ + ++ N A E+ G ++VIG L Sbjct: 427 RTEDALRLSEQKFASVFQQCPDILLIARHSDGCLLEVNEAFEEQIGLPPDQVIGRTATDL 486 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA 120 + + P + +GG + E+ + +G + +G + Sbjct: 487 DLWGVEGSGPLLLERLHQGGIRNL-----EMSFRRSNGQLFTGLTSAETFELDGTPALVV 541 Query: 121 LVRDASVEMAQKEQTR----QLIIAVDHLDRPVIVL-DPERHIVQCNRAFTEMFGYCISE 175 VRD S ++Q + + A +++ + +++ N F + GY ++ Sbjct: 542 AVRDISQLKETQQQLQTSEEKFAKAFHASPDGLLLSRQSDGLLLEVNEGFCRLTGYDLNP 601 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL 235 L + R + QL + G+ + S P+ + Sbjct: 602 TIDQTSLDLGIWVDLNERKR-LVDQLNRDGFVRDFTCHIRRSDGQIRLCELSARPL--PI 658 Query: 236 AHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNES 289 + ++ DITE +++ ++ + +I + R + S Sbjct: 659 TGVDCMLTIARDITERHLMQEKLQLAATVFENTAEGVLITDIDQRISAVNRAFSEITGYS 718 Query: 290 HVSLFALR-----NGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG---ILQIKTS 339 + +G + ++ W I ++++G + + Sbjct: 719 EIEALGQTPRLLASGQHDSAFYLAMWHQLTAEGHWQGEIYNKRKNGELYPSWLTISAVRN 778 Query: 340 SGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD 399 S E + F+ ADIS + ++ ++ DP+TGLPNR N L ++ Sbjct: 779 SDREITHFVAVFADISSI--------KHAQAKLDYQAHHDPLTGLPNRTLFENRLQGVLT 830 Query: 400 KA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF 455 A V + +D + + DSLG+ D L + R +E+++ + R+ G +F Sbjct: 831 CAQVSNRQGAVLFLDLDRFKHINDSLGHPVGDLLLKGIAQRLKEQVRDVDTVARLGGDEF 890 Query: 456 VLVSLEND-VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTA 512 +++ S+ + IA++L + P + F + SIGIS G + L+ A Sbjct: 891 IILLPGLHKPSDASTIANKLLACFNAPFQAGEHEFFTSASIGISLYPQDGTDVSTLIRNA 950 Query: 513 HNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGEL 572 AM + G N + ++ + ER+ L L+ A+ N++ L +QP++ +T L Sbjct: 951 DAAMYRSKAKGRNRVEAYTRDLTAQASERIALEHELRRAVERNEMSLCFQPKLSLKTQSL 1010 Query: 573 YGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPAL 632 G EAL RW P G VPP FI LAEE G I +G WV+ +ACRQ+ W+ L Sbjct: 1011 VGAEALIRWSHPTFGEVPPEHFIHLAEENGTILQLGDWVLEQACRQMQAWKQHYQPFGPL 1070 Query: 633 SVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGV 692 S+NL+ R L ++ + + L +EITE+ +M E + L+ +GV Sbjct: 1071 SINLAGAQLRHPHLARRIEQLLKHHQLKAGDLQLEITENFIMSQAEEALAVLYQLKKLGV 1130 Query: 693 GLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVV 752 L++DDFGTG+S LS L LP+ +KIDKSF+ + A+ AI ++G+S+ LT++ Sbjct: 1131 QLAIDDFGTGYSSLSYLKRLPLDILKIDKSFIRGLPDDPHDAAIARAIIALGRSMQLTII 1190 Query: 753 AEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI-PGWMSSVLP 796 AEGVE + Q L C IQGY S PLP EE ++ L Sbjct: 1191 AEGVENQAQQRFLAAEGCEQIQGYIVSLPLPPEEFAAAFLRIALS 1235 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 115/403 (28%), Gaps = 45/403 (11%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINE-NDEVMFFNPAAEKLWGYKREEVIGNN--I 57 + L +++ + +E A + + + +P AE L GY + + Sbjct: 300 IALEQELRSSEYHYRGLVESLSAIAWEADANDFTYSYVSPHAEDLLGYPLSDWL-RPGFW 358 Query: 58 DMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVY 117 ++ + Y G+ S + ++ + DG +W R +S + + Sbjct: 359 RSILHPEDALWAQAYCDSETAAGRD----HSLDYRVIRADGQPLWVRNIVSMIEHGHQPV 414 Query: 118 YLALVRDASVEMAQKEQTRQ----LIIAVDHLDRPVIVL-DPERHIVQCNRAFTEMFGYC 172 L+ D S ++ R +++ + +++ N AF E G Sbjct: 415 MRGLMIDISETKRTEDALRLSEQKFASVFQQCPDILLIARHSDGCLLEVNEAFEEQIGLP 474 Query: 173 ISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVY 232 + G L + L + L + E G+ + + + Sbjct: 475 PDQVIGRTATDLDLWGVEGSGP--LLLERLHQGGIRNLEMSFRRSNGQLFTG-LTSAETF 531 Query: 233 DVLAHLQNLVMTFSDITEERQIRQLEGNILA----AMCSSPPF-------HEMGEIICRN 281 ++ +V DI++ ++ +Q A +SP + + Sbjct: 532 ELDGTPALVVAV-RDISQLKETQQQLQTSEEKFAKAFHASPDGLLLSRQSDGLLLEVNEG 590 Query: 282 IESVLNESHVSLFALRNGMPIHW----ASSSHGAEIQNAQSWSA---TIRQRDGAP-AGI 333 + + W ++ IR+ DG Sbjct: 591 FCRLTGYDLNPTIDQTSLDLGIWVDLNERKRLVDQLNRDGFVRDFTCHIRRSDGQIRLCE 650 Query: 334 LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLI 376 L + + DI+ E+ ++ + QL Sbjct: 651 LSARPLPITGVDCMLTIARDIT--------ERHLMQEKL-QLA 684 Score = 97.4 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 35/290 (12%), Positives = 83/290 (28%), Gaps = 29/290 (10%) Query: 103 TRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDP-ERHIVQC 161 L+ V + + R ++E + V+ L D + Sbjct: 278 LMAVLAVVIRINRRLSSEISRRIALEQELRSSEYHYRGLVESLSAIAWEADANDFTYSYV 337 Query: 162 NRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEK 221 + ++ GY +S+ + PE + ++ ++ G+ Sbjct: 338 SPHAEDLLGYPLSDWLRPGFWRSILHPEDALWAQAYCDSETAAGRDHSLDYRVIRADGQP 397 Query: 222 IWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEG----NILAAMCSSPPFHEMGEI 277 +W++ +S + H + DI+E ++ + P + Sbjct: 398 LWVRNIVSMI--EHGHQPVMRGLMIDISETKRTEDALRLSEQKFASVFQQCPDILLIARH 455 Query: 278 -------ICRNIESVLNESHVSLFALRNGMPIHWASSSHG----AEIQNAQSWSATI--R 324 + E + + W G + + + R Sbjct: 456 SDGCLLEVNEAFEEQIGLPPDQVIGRTATDLDLWGVEGSGPLLLERLHQGGIRNLEMSFR 515 Query: 325 QRDGAPA-GILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIE 373 + +G G+ +T T A + V DISQ ++++Q ++ Sbjct: 516 RSNGQLFTGLTSAETFELDGTPALVVAVRDISQ--------LKETQQQLQ 557 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 851 bits (2200), Expect = 0.0, Method: Composition-based stats. Identities = 196/825 (23%), Positives = 353/825 (42%), Gaps = 50/825 (6%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + + + ++++N + F+ L E +G + Sbjct: 224 RAERELRDREMKLAALIASLPDLMFVVDQNRCIAEFHAPDPGLLLTPPECFLGRPYARTL 283 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYL 119 P + E + G A+ E L+ G + ++S+++ G V ++ Sbjct: 284 PPAVVVKLDEALEEISATGGAK----QVEYTLDLPRGRHHF-SASVSRLAGSGLVPEGFI 338 Query: 120 ALVRDASVEMAQK----EQTRQLIIAVDHLDRPVIVLDP-ERHIVQCNRAFTEMFGYCIS 174 LVRD + + + E + + ++V+DP + IV+ N E +GY Sbjct: 339 VLVRDLTERVRMEQALIESELRYRELFANSRVVMLVIDPVDGRIVEANAKACEYYGYDPV 398 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 + M+ + + P +++ D G+ ++ + SP+ Sbjct: 399 SLTRMKIEDINVPGREPLRF-----EMVQARKPDTFRCCHRLAGGQLRDVEVASSPI--E 451 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNE 288 +A + L D+TE ++ + + +S + + ++ Sbjct: 452 IAGRKLLYSIVRDVTERKRFEERMRQAMVVFKASSQGIMTTDAQGVITSVNPAFCTITGY 511 Query: 289 SHVSLFALRN-----GMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG---ILQIKT 338 + ++ + I + SW+ + R+ DG + Sbjct: 512 LAAEVIGRKSSMFKPERHEATFFDAMWTSIVESGSWAGEVWSRRSDGDRYPQWVTITAVR 571 Query: 339 SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV 398 + + ++ +DI+ E+++ + + FDP+TGL NR+ L + LD + Sbjct: 572 DTDGRIAEYVTLFSDIT--------ERKQQEVAMWRQANFDPLTGLANRSLLQDRLDRAL 623 Query: 399 DKAVSPV----VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQ 454 A + + +D + + DSLG+ D+ L++V R ++ + + R+ G + Sbjct: 624 AHARRHGCKVGLLFLDLDGFKWINDSLGHDVGDELLVDVARRLNSCVRDEDTVARLGGDE 683 Query: 455 FVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLST 511 F +V + D +++ IAD+L V+ +P + ++ S+GI+ G + LL Sbjct: 684 FTVVVHDLADRADLGAIADKLVAVLREPFALRGARHHISGSVGITVFPDDGDDVQTLLRN 743 Query: 512 AHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGE 571 A AM ++ G N Q ++P M R+ L A L+ A+ +L YQP + +G Sbjct: 744 ADIAMYKAKQAGKNRAQPYAPHMQADALARVHLEADLRMAVEQRAFELHYQPIVDCASGA 803 Query: 572 LYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPA 631 L G EAL RW P G + P FIP+AEE G I IG WV+ E RQ +W ++ Sbjct: 804 LVGAEALIRWKHPERGMISPLEFIPVAEECGLIVPIGEWVLREVVRQRRDWLARGHPPLR 863 Query: 632 LSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMG 691 L++N+S + FR LP V + +G L EITES++M + R+ +++ G Sbjct: 864 LTLNVSGVQFREAGLPELVRTLLAEFGTARSSLVFEITESVLMGGSENVEARMCDIKEQG 923 Query: 692 VGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTV 751 + ++DDFGTGFS LS L PV +KID+SFV C ++ L+EAI ++ SL L V Sbjct: 924 ICFALDDFGTGFSSLSYLKRFPVDIVKIDRSFVRDCPDDRNDATLVEAIINMAHSLGLRV 983 Query: 752 VAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLP 796 AEGVE+ EQ E LR + C +QGY +PL A+ M+ + Sbjct: 984 TAEGVESAEQREFLRALGCDYLQGYLIGKPLAADAFEALMAPLRS 1028 Score = 179 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 93/256 (36%), Gaps = 10/256 (3%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINE-NDEVMFFNPAAEKLWGYKREEVIGNNIDM 59 +++ A ++ + + + ++I+ + ++ N A + +GY + I+ Sbjct: 348 VRMEQALIESELRYRELFANSRVVMLVIDPVDGRIVEANAKACEYYGYDPVSLTRMKIED 407 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL 119 + P E ++ + + G A S + G+ Sbjct: 408 INVPGREPLRFEMVQARKPD--------TFRCCHRLAGGQLRDVEVASSPIEIAGRKLLY 459 Query: 120 ALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 ++VRD + +E+ RQ ++ + ++ D + I N AF + GY +E G Sbjct: 460 SIVRDVTERKRFEERMRQAMVVFKASSQGIMTTDAQGVITSVNPAFCTITGYLAAEVIGR 519 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 + ++ A + + ++ E G++ +I+ V D + Sbjct: 520 K-SSMFKPERHEATFFDAMWTSIVESGSWAGEVWSRRSDGDRYPQWVTITAVRDTDGRIA 578 Query: 240 NLVMTFSDITEERQIR 255 V FSDITE +Q Sbjct: 579 EYVTLFSDITERKQQE 594 Score = 152 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 58/388 (14%), Positives = 127/388 (32%), Gaps = 38/388 (9%) Query: 11 DGIFF---PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP 67 + A+E + V+ + + + + NP E+ GY +EV+G N +L + Sbjct: 104 EQQLRKLSTAIECSPASIVITDRSGTIEYVNPQFERSTGYTAQEVVGKNPRILKSGNRS- 162 Query: 68 AHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLALVRDA 125 E + +KDG+ W R +++ + A+ + ++A+ D Sbjct: 163 ---ADEYAAMWATITHGHVWRGEFENVRKDGAHYWERASIAPIRADDGMISGFVAVKEDI 219 Query: 126 SVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 +++ + + R +L + L + V+D R I + + + G Sbjct: 220 TLQKRAERELRDREMKLAALIASLPDLMFVVDQNRCIAEFHAPDPGLLLTPPECFLGRPY 279 Query: 182 DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNL 241 L P L+++ Q E+ L G AS+S + + Sbjct: 280 ARTL-PPAVVVKLDEALEEISATGGAKQVEYTLDLPRGRH-HFSASVSRLAGSGLVPEGF 337 Query: 242 VMTFSDITEERQIRQLE----GNILAAMCSSPPFHEMGE-IICRNIE------SVLNESH 290 ++ D+TE ++ Q +S + + + R +E Sbjct: 338 IVLVRDLTERVRMEQALIESELRYRELFANSRVVMLVIDPVDGRIVEANAKACEYYGYDP 397 Query: 291 VSLFALRNGMPIHWASSSHGAEIQNA---QSWSATIRQRDGAPAGILQIKTSSGAETSAF 347 VSL ++ E+ A ++ R G + + Sbjct: 398 VSLTRMKIEDINVPGREPLRFEMVQARKPDTFRCCHRLAGGQLRDVEVASSPIEIAGRKL 457 Query: 348 I-ERVADISQHMAALALEQEKSRQHIEQ 374 + V D++ E+++ + + Q Sbjct: 458 LYSIVRDVT--------ERKRFEERMRQ 477 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 56/304 (18%), Positives = 100/304 (32%), Gaps = 28/304 (9%) Query: 90 ELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPV 149 +L+ + D + ++ SAE + L R SV ++Q R+L A++ + Sbjct: 67 QLRAHRAD-----LQRLVAARSAEVRAREAELDRAQSVAHVGEQQLRKLSTAIECSPASI 121 Query: 150 IVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQ 209 ++ D I N F GY E G P +L AD + + + Sbjct: 122 VITDRSGTIEYVNPQFERSTGYTAQEVVGKNP-RILKSGNRSADEYAAMWATITHGHVWR 180 Query: 210 DEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNI---LAAMC 266 EF + + G W +ASI+P+ + V DIT +++ + + LAA+ Sbjct: 181 GEFENVRKDGAHYWERASIAPIRADDGMISGFVAVKEDITLQKRAERELRDREMKLAALI 240 Query: 267 SSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHG-----------AEIQN 315 +S P R I L + + EI Sbjct: 241 ASLPDLMFVVDQNRCIAEFHAPDPGLLLTPPECFLGRPYARTLPPAVVVKLDEALEEISA 300 Query: 316 AQ---SWSATIRQRDGAPAGILQIKTSSGAE--TSAFIERVADISQHMAALALEQEKSRQ 370 T+ G + +G+ FI V D+++ + +EQ Sbjct: 301 TGGAKQVEYTLDLPRGRHHFSASVSRLAGSGLVPEGFIVLVRDLTERVR---MEQALIES 357 Query: 371 HIEQ 374 + Sbjct: 358 ELRY 361 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 851 bits (2199), Expect = 0.0, Method: Composition-based stats. Identities = 192/835 (22%), Positives = 358/835 (42%), Gaps = 77/835 (9%) Query: 26 VLINENDEVMF---------------FNPAAEK----LWGYKR-EEVIGNNIDMLIPRDL 65 + + N ++ N A + L+G E+ + L Sbjct: 221 FVTDSNGVIILAHDPEMLMMAVTDAKVNRLAAQQRLELYGRTDFPELRITPWQEMADVRL 280 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQL-----------EKKDGSKIWTRFALSKVSAEG 114 R E H + G+ + + + +W +++ ++ Sbjct: 281 RHIGNEDYPHIQAVTDLPEYGLEIHSEADLPNLPLLLNQRRSNFLLLWLLGSVTLLTVVS 340 Query: 115 KVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS 174 +Y +R A ++L + + + + LD + + N A +M GY Sbjct: 341 LTFYFRSIR--QSRSAVAASEQRLRLILGSVSNGIWGLDKDGNTTFVNAAAADMLGYTPE 398 Query: 175 EASGMQPDTLLNIP-----EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASIS 229 E ++ +PA+ L+ R + +L + G ++++ S Sbjct: 399 ELFDKPMHATIHHSYPDGTHYPAERCPMHATLVDGKPRMGIDEVLWRKDGSELYVDYSSH 458 Query: 230 PVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICR---NIESVL 286 P+ ++ V+ F DI+E RQ + + SS + + R + Sbjct: 459 PIR-SHGEMEGAVVVFEDISERRQKDEALKLASSVYQSSNDGILVTDEKNRILDVNPAFT 517 Query: 287 NESHVSLFALRNGMPIHWASSSH--------GAEIQNAQSWSATI--RQRDGAPAG---I 333 + +L +R P + S H I + W I +++G Sbjct: 518 RITGYTLEDVRGKDPGIFQSGKHDAQFYQQMWQSILDDGHWQGEIWDLKKNGELHAKWLS 577 Query: 334 LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNY 393 + + + + + +DI+ E+++ + I + FD +T LPNR + Sbjct: 578 ISVIRRADGSIYRHVGQFSDIT--------EKKRKDELIWEQANFDTLTNLPNRRLFADR 629 Query: 394 LDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCR 449 + + + +D + + D+ G++ D+ L+EV R ++ + + R Sbjct: 630 FRQAISAGARSGRYGALLSLDLDQFKRLNDTFGHSMGDKLLIEVARRLTSCVREEDTVAR 689 Query: 450 IEGTQFVLVSLENDVSN------ITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--L 501 + G +F+++ IA+++RN + +P +D + SIGI Sbjct: 690 MGGDEFLVILNGLGSEQNEAAIRAELIAEKIRNELCRPYQLDKTEHHSSSSIGIVLFRGH 749 Query: 502 GKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVY 561 + + LL+ AM + G N FF +M E++++R L AL+ A+ + L Y Sbjct: 750 SDDPERLLAHVDTAMYQSKAKGRNAICFFDSSMQEILEKRGQLETALRGALERKEFLLHY 809 Query: 562 QPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAE 621 Q Q+ +G G EAL RW++ G V P +FIP+AEE G I IG WV+ AC QLA Sbjct: 810 QLQMD-SSGRPIGAEALLRWNNAKLGSVSPVQFIPVAEESGLILPIGHWVLETACAQLAR 868 Query: 622 WRSQN-IHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEI 680 W+S + ++VN+SA+ FR +V + + GI L +E+TES++++ + Sbjct: 869 WQSDPRFNRLCIAVNVSAIQFREAAFVAKVRNVLQQSGIQPWLLKLELTESLVLDDINDS 928 Query: 681 FKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAI 740 +++ L+++GV S+DDFGTG+S LS L LP+ ++KID+SFV T++ A+++ I Sbjct: 929 ILKMEALKNLGVKFSMDDFGTGYSSLSYLSRLPLDQLKIDQSFVRDITTDQHDAAIVQTI 988 Query: 741 TSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 S+ SL + V+AEGVET+EQ E L C+ QGY +++P+P EE+ ++ + Sbjct: 989 ISMALSLGMEVIAEGVETEEQREFLDLRGCQAYQGYLYAKPMPIEELEIKLAQLT 1043 Score = 189 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 103/278 (37%), Gaps = 11/278 (3%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A A++ L G ++++ F N AA + GY EE+ + I Sbjct: 354 AVAASEQRLRLILGSVSNGIWGLDKDGNTTFVNAAAADMLGYTPEELFDKPMHATIHHSY 413 Query: 66 -RPAHPEYIRHNREGGKARVEG-MSRELQLEKKDGSKIWTRFALSKVSAEGKV-YYLALV 122 H R + M + L +KDGS+++ ++ + + G++ + + Sbjct: 414 PDGTHYPAERCPMHATLVDGKPRMGIDEVLWRKDGSELYVDYSSHPIRSHGEMEGAVVVF 473 Query: 123 RDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPD 182 D S + E + + ++V D + I+ N AFT + GY + + G P Sbjct: 474 EDISERRQKDEALKLASSVYQSSNDGILVTDEKNRILDVNPAFTRITGYTLEDVRGKDPG 533 Query: 183 TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 + + A ++ Q + Q E L + GE SIS + + V Sbjct: 534 -IFQSGKHDAQFYQQMWQSILDDGHWQGEIWDLKKNGELHAKWLSISVIRRADGSIYRHV 592 Query: 243 MTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICR 280 FSDITE+++ + + F + + R Sbjct: 593 GQFSDITEKKRKDE-------LIWEQANFDTLTNLPNR 623 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 39/336 (11%), Positives = 99/336 (29%), Gaps = 29/336 (8%) Query: 2 KLTDADNAADGIFFP--ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDM 59 +++ + + + + G ++ +E + ++ NPA ++ GY E+V G + + Sbjct: 475 DISERRQKDEALKLASSVYQSSNDGILVTDEKNRILDVNPAFTRITGYTLEDVRGKDPGI 534 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVY 117 H E+ KK+G W ++ + + Sbjct: 535 FQSG----KHDAQFYQQMWQSILDDGHWQGEIWDLKKNGELHAKWLSISVIRRADGSIYR 590 Query: 118 YLALVRDASVEMAQKEQ--TRQLIIAVDHLDRPVIVLDPERHIVQC---NRAFTEMFGYC 172 ++ D + + + E + + +L + D R + + + + Sbjct: 591 HVGQFSDITEKKRKDELIWEQANFDTLTNLPNRRLFADRFRQAISAGARSGRYGALLSLD 650 Query: 173 ISEASGMQP-------DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEK---- 221 + + + D LL + +R + + + D+ ++L G + Sbjct: 651 LDQFKRLNDTFGHSMGDKLLIEVARRLTSCVREEDTVARMGGDEF-LVILNGLGSEQNEA 709 Query: 222 -IWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNI---LAAMCSSPPFHEMGEI 277 I + + + L L T + I G+ + + Sbjct: 710 AIRAELIAEKIRNELCRPYQLDKTEHHSSSSIGIVLFRGHSDDPERLLAHVDTAMYQSKA 769 Query: 278 ICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEI 313 RN + S + R + + E Sbjct: 770 KGRNAICFFDSSMQEILEKRGQLETALRGALERKEF 805 >UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q087W4_SHEFN Length = 1144 Score = 851 bits (2199), Expect = 0.0, Method: Composition-based stats. Identities = 177/818 (21%), Positives = 367/818 (44%), Gaps = 44/818 (5%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 + + ++ + + G V+++ + +++ N + + GY +E+ I + Sbjct: 325 IEEQLRRSESTYRNIISTAQDGFVIVSVDGKIIESNQSFADMTGYTLDELFNKPIGDIET 384 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALV 122 + + I ++ V+ + Q + K G +S + +++ + Sbjct: 385 SENHQFSTQNIITAKQ-----VKAIHYTSQHKHKLGYLFHVEVNISFWDGDDGMFFCFI- 438 Query: 123 RDASVEMAQKE----QTRQLIIAVDHLDR-PVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 +D S + ++ + +++ V D R ++ N+A +++GY +A Sbjct: 439 KDISQRINAEQKLLLSESKFRHIFENIPSISVQGYDKNRSVIFWNQASEKLYGYTKEQAL 498 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARD-QDEFLLLTRTGEKIWIKASISPVYDVLA 236 G + + L+ P + + + + +E LL G + + +S + + + Sbjct: 499 GKKLEDLIIPPPYREHVINNVNAWINEGVPILAEELLLQRADGSNVAVYSSHTLINNTDN 558 Query: 237 HLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMG------EIICRNIESVLNESH 290 + + D++ +++ + + A+ SP + E + E + + Sbjct: 559 EAEMYCIDI-DLSAQKKAEEQALTLSQAIEQSPISMILTNIDSKIEYVNSAFEKISGYAA 617 Query: 291 VSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGI---LQIKTSS 340 + L++G+ I +W + R+++G + + Sbjct: 618 SEVIGQSASMLKSGLTPKSLYKQLWDAISTGHAWQGELQNRKKNGDIFWEHAHIAPIFDN 677 Query: 341 GAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDK 400 T ++ D++Q+ ++ + I +D +TGLPNR + L ++ Sbjct: 678 AGVTKHYLALKQDVTQY--------KQQEEKILHQAHYDSLTGLPNRLLSLDRLSQMLKD 729 Query: 401 AVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFV 456 A V + +D + V D++G++ D+ L++ R + ++ + R+ G +F+ Sbjct: 730 AHRAKNNVAVLFLDLDDFKKVNDTMGHSVGDELLIQAAVRLKNTIRESDVVGRLGGDEFI 789 Query: 457 LVS-LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAH 513 ++ N+ + IA +L +P ++++ T+SIGI+ ++ LL A Sbjct: 790 IILSNINEPIEVEIIASKLLEQFYQPFRLENRELVSTISIGIALYPLDSEDPKELLRQAD 849 Query: 514 NAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELY 573 +AM + + G N + F++ MN + RL + L+ A+ + ++ +QP + ++ ++ Sbjct: 850 SAMYHSKDRGRNTYNFYTHQMNHDMDRRLKIEEQLRSALKQKEFEVYFQPFVDIKSRKII 909 Query: 574 GIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALS 633 G EAL RW++ L G V P FIP+AE+ G I +IG++VI A +W+ ++ Sbjct: 910 GAEALLRWNNALLGQVTPDEFIPIAEQTGLIVSIGQYVIEVAFATAKKWQQTYNPYFKIA 969 Query: 634 VNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVG 693 +N+S FR N + ++ + I + +EITE +++ D I + + D+GV Sbjct: 970 INVSPKQFRENTFVDMLNIQLDKHQIHASTIELEITEGVLLSSDAVIDSNLISINDIGVS 1029 Query: 694 LSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVA 753 +S+DDFGTG+S LS L S P +K+DKSF++ + L L+ A ++G LNLTVVA Sbjct: 1030 ISMDDFGTGYSSLSYLRSYPFNTLKVDKSFINDITVDPGDLELVGAAIAMGHGLNLTVVA 1089 Query: 754 EGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 EGVET+EQ+ +L + C QGY FS+PLP + Sbjct: 1090 EGVETEEQYHLLNALKCDYGQGYLFSKPLPQAAFEALL 1127 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 44/425 (10%), Positives = 110/425 (25%), Gaps = 68/425 (16%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 + ++ + + + N A + E++ L R Sbjct: 203 LETEKNLLQSIIDGIPDIIFYKSADGVYLGCNKAFSEALKLNPEDIKHKTDYDLFDRQQA 262 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDG--SKIWTRFALSKVSAEGKVYYLALVRD 124 + + R + + E + DG T S+ + + RD Sbjct: 263 DSFIKADRFVLQ----ENQPWMDEEWITTPDGIAHIFKTHKTPFVDSSGDIQGIVGVSRD 318 Query: 125 ASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 + +EQ R+ + +++ + I++ N++F +M GY + E Sbjct: 319 MADRKLIEEQLRRSESTYRNIISTAQDGFVIVSVDGKIIESNQSFADMTGYTLDELFNKP 378 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 + + + + + G ++ +IS Sbjct: 379 IGDIETSENHQFSTQNII--TAKQVKAIHYTSQHKHKLGYLFHVEVNISFWDGDDG---M 433 Query: 241 LVMTFSDITEERQIRQLEGNI---LAAMCSSPPFHEMGE--------IICRNIESVLNES 289 DI++ Q + + P + + E + + Sbjct: 434 FFCFIKDISQRINAEQKLLLSESKFRHIFENIPSISVQGYDKNRSVIFWNQASEKLYGYT 493 Query: 290 HVSLFALRNGMPIHWASSSHGAEIQNAQSWSAT----------IRQRDGA---PAGILQI 336 + I I N +W +++ DG+ + Sbjct: 494 KEQALGKKLEDLIIPPPYR-EHVINNVNAWINEGVPILAEELLLQRADGSNVAVYSSHTL 552 Query: 337 KTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDD 396 ++ E + D+S Q+K+ + +T L Sbjct: 553 INNTDNEAEMY-CIDIDLSA--------QKKAEEQ--------ALT-----------LSQ 584 Query: 397 LVDKA 401 ++++ Sbjct: 585 AIEQS 589 >UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B8HP13_CYAP4 Length = 1094 Score = 850 bits (2198), Expect = 0.0, Method: Composition-based stats. Identities = 198/833 (23%), Positives = 350/833 (42%), Gaps = 58/833 (6%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGY-KREEVIGNNIDML 60 + A A+ + E + G + + NPA +++GY EE++ ++ + Sbjct: 266 RTESALRQAEEKYRSIFENAVEGIFQSSPEGRYIRVNPALARMYGYDSPEELLA-HLTDI 324 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYY 118 PE + + E Q+ ++DGS IW V +YY Sbjct: 325 --GRQLYVDPERRAEFQRLIDQQTIVTHFEAQVYRRDGSIIWITEHARAVRDGTGKLLYY 382 Query: 119 LALVRDASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS 174 V + + + Q Q L L +D + I+ Sbjct: 383 EGTVENITDRKRTELQLLQTTSELKAIFQALPDLYFRVDHDSTILDFKAGRRTDLYLEPE 442 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 E G + +L P + ++L AR E++L GE+ +A + P+ Sbjct: 443 EFLGRRMTDVLPPP-VATQFSGAIDRILSGEARVDLEYVLPMPDGEQ-TFEARLLPLL-- 498 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGN----ILAAMCSSPPFHEMGEIICRNIESVLNESH 290 ++ +IT+ ++ + ++ I + N + Sbjct: 499 ---QTQIIAVIRNITKRKRAENELRQAEEKYRSIFENATEGIFQSSPSGSYISA--NPAL 553 Query: 291 VSLFALRNGMPIHWASSSHGAEIQ-----------------NAQSWSATIRQRDGAPAGI 333 ++ + + + G ++ + + + ++DG+ I Sbjct: 554 ARIYGYDSPQELQHHLTDIGRQLYVNPDRRQQFVHSILEQGQVTDFESQVYRKDGSVIWI 613 Query: 334 LQ---IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNL 390 + F V DIS ++++ I D +TGLPNR Sbjct: 614 SENARAVRDRQGNILYFEGTVEDISA--------RKQAELTIHYQAFHDLLTGLPNRALF 665 Query: 391 HNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQY 446 + L+ + A V+ + +D + + D+LG+A DQ L +V R L+ Sbjct: 666 DDRLNQALADARRYQHLLAVFFLDLDRFKVINDTLGHAIGDQLLQQVAQRLLPCLREIDT 725 Query: 447 LCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGK 503 + R G +F L+ ++ +IA+ L + P + +T S+GI+ G+ Sbjct: 726 IARWGGDEFTLLLPHVQTPADSVKIAERLLASLKPPFSLKGHNLHITASLGIALYPHDGE 785 Query: 504 NRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQP 563 + LL A A+ ++ G NG ++P +N E L L + L +A+ +L + YQP Sbjct: 786 DGTTLLRNADAALYRAKEEGRNGLYCYTPMLNSRGHELLALESELHKALEQQELDVYYQP 845 Query: 564 QIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWR 623 QI A TGE+ +EAL RW G V P FI LAEE G I IG+WV+ AC Q +W+ Sbjct: 846 QINAATGEILRLEALVRWQHSQLGLVSPQTFIGLAEENGLIMPIGQWVLETACHQCRQWQ 905 Query: 624 SQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKR 683 ++ +VNLS F+ L QV++ + G+ +L +EITE+ M++ Sbjct: 906 ARGFPGLGTAVNLSVRQFQQPHLVQQVAETLQYTGLAADRLELEITETTAMQNVNLTRTL 965 Query: 684 IQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSI 743 + L MGVG+++DDFG+G+S L+ L P+ IKID++F+ + A+++A+ ++ Sbjct: 966 LHELDQMGVGIALDDFGSGYSSLNYLRQFPLHSIKIDRTFIQELPYSVQDQAIVKAVIAL 1025 Query: 744 GQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLP 796 G+ LNL+VVAEGVE++ Q ++LR + C +IQGYFF P+ A + + Sbjct: 1026 GRGLNLSVVAEGVESQSQLKVLRSLGCDIIQGYFFGPPIAAAAMTQLLEQCTC 1078 Score = 188 bits (479), Expect = 7e-46, Method: Composition-based stats. Identities = 54/396 (13%), Positives = 118/396 (29%), Gaps = 36/396 (9%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + A A+ + + + +++ V++ +P ++L GY + G + L+ Sbjct: 140 RAEAALIQAEARWRSLIHNSSDLITILDAQGTVLYHSPVLKRLLGYHPQNCEGKSAFGLV 199 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLAL 121 R + + + ++ E + +DGS + + A+ V + + Sbjct: 200 HPQDRKQVQQTFQQAITHTEF---TLTVEYRFRHQDGSWRFLESTGRNLLADPAVAGIVV 256 Query: 122 -VRDASVEM----AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 RD + A ++ + ++ + PE ++ N A M+GY E Sbjct: 257 NTRDITDHKRTESALRQAEEKYRSIFENAVEGIFQSSPEGRYIRVNPALARMYGYDSPEE 316 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLL-WKTARDQDEFLLLTRTGEKIWIKASISPVYDVL 235 + + R Q+L+ +T E + R G IWI V D Sbjct: 317 LLAHLTDIGRQLYVDPERRAEFQRLIDQQTIVTHFEAQVYRRDGSIIWITEHARAVRDGT 376 Query: 236 AHLQNLVMTFSDITEERQIRQLEGNI----LAAMCSSPPFHEMGEIICRN---------- 281 L T +IT+ ++ A + P + + Sbjct: 377 GKLLYYEGTVENITDRKRTELQLLQTTSELKAIFQALPDLYFRVDHDSTILDFKAGRRTD 436 Query: 282 ----IESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQ--RDGAPAGILQ 335 E L + S + + DG + Sbjct: 437 LYLEPEEFLGRRMTDVLPPPVATQ---FSGAIDRILSGEARVDLEYVLPMPDGEQTFEAR 493 Query: 336 IKTSSGAETSAFIERVADISQHMAALALEQEKSRQH 371 + + I + +I++ A E ++ + Sbjct: 494 LL---PLLQTQIIAVIRNITKRKRAE-NELRQAEEK 525 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 44/396 (11%), Positives = 114/396 (28%), Gaps = 48/396 (12%) Query: 13 IFFPALEQNMMGAVLI---NENDEVMFFNPAAEKLWGYKREEVI---GNNIDMLIPRDLR 66 F ++ G V + + + + L GY +E+ G + + + Sbjct: 20 RFLRLIDSLP-GIVFSGSNDAQWSMQYLSRGCLALTGYSSDELAQKGGEAFNAITHPEDL 78 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLALVRD 124 P + A E E ++ K G + W +V E + + D Sbjct: 79 P----RVLATLSAAIASSEPYEVEYRIRTKSGEEKWVLEKGHRVLDEDQCTCGIEGFITD 134 Query: 125 ASVEMAQK----EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 + + + + + + + +LD + ++ + + GY G Sbjct: 135 ITPLKRAEAALIQAEARWRSLIHNSSDLITILDAQGTVLYHSPVLKRLLGYHPQNCEGKS 194 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 L++ + + Q + E+ + G +++++ + + Sbjct: 195 AFGLVHPQDRKQVQQTFQQAITHTEFTLTVEYRFRHQDGSWRFLESTGRNLL-ADPAVAG 253 Query: 241 LVMTFSDITEERQIRQLEGN----ILAAMCSSPPFHEMGEIICRNIE------SVLNE-S 289 +V+ DIT+ ++ + ++ R I + S Sbjct: 254 IVVNTRDITDHKRTESALRQAEEKYRSIFENAVEGIFQSSPEGRYIRVNPALARMYGYDS 313 Query: 290 HVSLFALRNGMPIHWASSSHGAEIQNA--------QSWSATIRQRDGAPAGILQ---IKT 338 L A + + A + +RDG+ I + Sbjct: 314 PEELLAHLTDIGRQLYVDPERRAEFQRLIDQQTIVTHFEAQVYRRDGSIIWITEHARAVR 373 Query: 339 SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQ 374 + + V +I+ +++++ + Q Sbjct: 374 DGTGKLLYYEGTVENIT--------DRKRTELQLLQ 401 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 849 bits (2195), Expect = 0.0, Method: Composition-based stats. Identities = 203/827 (24%), Positives = 365/827 (44%), Gaps = 71/827 (8%) Query: 2 KLTDADNAADG------IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGN 55 +T+ NA + + I++ ++ + +E IG Sbjct: 542 DITERKNAEEATNKINAQMQAIFDAFPDILFRIDQQGTILDYKTQDHHSLYCSPQEFIGR 601 Query: 56 NIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK 115 + ++P + E ++ G+ + L K + + ++S Sbjct: 602 TVQEVLPESVGNLLYEGVQKALVSGEIVSIEYFLIIAL-----QKRFFDARIVRLS---P 653 Query: 116 VYYLALVRDASVEMA----QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY 171 V +A+VRD S +E +L + +++LD + ++ N A +FG Sbjct: 654 VETIAVVRDISDRKQTELALRESEERLKTIISTNPNGLLILDLQGKVLFVNPAAEILFGR 713 Query: 172 CISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV 231 + G +L IP + E +L +G+ I ++ + + Sbjct: 714 KQEDLMGQ----ILGIPIIVNNY---------------SEIEILQPSGKLIIVRMRLVKI 754 Query: 232 YDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE------IICRNIESV 285 + + + D+T+ +Q ++ + A SP + + + E + Sbjct: 755 --IWQEKNAFLASLVDVTDIQQAQEQLKILYQATEQSPVSVVITDAEGTIEYVNPKFEKI 812 Query: 286 LNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGI---LQ 335 + L++G I + Q W ++++G + Sbjct: 813 TGYQRAEVIGQNPRILKSGETTTEEYKQIWKTITSGQEWHGEFHNKKKNGELFWEAASIS 872 Query: 336 IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLD 395 ++ + F+ DI+ E++ + + +D +TGLPNR + L Sbjct: 873 PIKNAEGIITHFVAVKEDIT--------ERKAQQTTLTYQANYDALTGLPNRFLAIDRLK 924 Query: 396 DLVDKA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIE 451 + +A V I +DH +DV D+LG+ + D L +V R ++ L+ + R+ Sbjct: 925 QAILQADRQKKRVAVMFIDLDHFKDVNDTLGHEYGDLLLQKVSQRLKQCLRKSDTVARLG 984 Query: 452 GTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYL 508 G +F+++ + + IA ++ + + KP + + ++ SIGI+ D G + L Sbjct: 985 GDEFLIILPNLRETHHCKLIASKILSSLEKPFNLLTEEAFISASIGITLYPDDGNDVSVL 1044 Query: 509 LSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAE 568 + A AM ++ G N ++F++ MNE + RL + L+ A+ N+ LVYQP I Sbjct: 1045 MRNADAAMYLGKRGGRNDFKFYTMGMNEEAQSRLRIEKLLRYALKKNEFYLVYQPIIDLR 1104 Query: 569 TGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIH 628 + G EAL RW++P G V P +FI +AEE G I +G WVI++AC+++ W++Q Sbjct: 1105 FQTVIGAEALLRWNNPELGRVSPDQFISIAEETGLISELGAWVISQACQEVVNWQTQG-S 1163 Query: 629 IPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILR 688 ++VNLS FR ++L +S+A+ GI H L +EITE +++E I+ L Sbjct: 1164 PIWVAVNLSPRQFRESKLLEIISNAITLNGITNHYLELEITEKLLLEDFPGSKGIIEQLH 1223 Query: 689 DMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLN 748 +M LS+DDFGTG+S LS L+ P +KID+SF+ + +LAL++ I ++G L Sbjct: 1224 EMDFRLSIDDFGTGYSALSYLIKFPFNRLKIDRSFIADIPHNQEVLALVKTIIAMGHGLK 1283 Query: 749 LTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 L V+AEGVET EQ +L C QGYFFSRPL +EE ++ S Sbjct: 1284 LQVIAEGVETTEQANILEAEGCDYAQGYFFSRPLLSEEFRRYLQSHQ 1330 Score = 155 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 53/380 (13%), Positives = 116/380 (30%), Gaps = 34/380 (8%) Query: 17 ALEQNMMGAVLINENDEVMFFNPAAEKLWGYK-REEVIGNNIDMLIPRDLRPAHPEYIRH 75 A+ ++ + + + + N A ++W Y +EV+G D + Sbjct: 313 AITSSISAIAIGDLQGNLTYVNQAFLEMWRYDNDDEVLGKPFLNFWQIDQQGET------ 366 Query: 76 NREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEG--KVYYLALVRDASVEMAQKE 133 + + R + EL +KKD S + + + V E +Y + V D S + +E Sbjct: 367 LIQTIRTRGQ-WIGELIAKKKDKSLFKAQVSANLVKNEANIAIYIMISVMDVSQQQGTEE 425 Query: 134 QTRQLIIAV----DHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE 189 ++L+ + D + N + G + +A GM ++ + Sbjct: 426 SLQKLLRLYTNLTQAAPVGIFRADESGKWLYANEKALLISGISLDKAIGMGWANYVHNDD 485 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 ++ + + E+ G W+ P D + + T +DIT Sbjct: 486 RARVFNEWIKS-IQTQTSWRTEYRYRHSDGNNTWVLVQAIPEMDEQGKIVGYLGTLTDIT 544 Query: 250 EERQIRQ----LEGNILAAMCSSPPFHEMGEIICRNIESVLNE------SHVSLFALRNG 299 E + + + + A + P + ++ + S Sbjct: 545 ERKNAEEATNKINAQMQAIFDAFPDILFRIDQQGTILDYKTQDHHSLYCSPQEFIGRTVQ 604 Query: 300 MPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTS------SGAETSAFIERVAD 353 + + + E S I I+ ++ I V D Sbjct: 605 EVLPESVGNLLYEGVQKALVSGEIV--SIEYFLIIALQKRFFDARIVRLSPVETIAVVRD 662 Query: 354 ISQHMAALALEQEKSRQHIE 373 IS + +S + ++ Sbjct: 663 ISDRKQTELALR-ESEERLK 681 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 51/393 (12%), Positives = 110/393 (27%), Gaps = 49/393 (12%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 ++ ++ + +G +E+ + ++ N A + G ++ IG + Sbjct: 424 EESLQKLLRLYTNLTQAAPVGIFRADESGKWLYANEKALLISGISLDKAIGMGWANYVHN 483 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLAL 121 D R + + + E + DG+ W E V YL Sbjct: 484 DDR---ARVFNEWIKSIQTQTS-WRTEYRYRHSDGNNTWVLVQAIPEMDEQGKIVGYLGT 539 Query: 122 VRDASVEMAQKEQT----RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 + D + +E T Q+ D + +D + I+ E Sbjct: 540 LTDITERKNAEEATNKINAQMQAIFDAFPDILFRIDQQGTILDYKTQDHHSLYCSPQEFI 599 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 G +L +Q+ L E+ L+ +K + A I + Sbjct: 600 GRTVQEVL-PESVGNLLYEGVQKALVSGEIVSIEYFLIIAL-QKRFFDARIVRLS----- 652 Query: 238 LQNLVMTFSDITEERQIRQLEGNILAAMCSSP----------PFHEMGEIICRNIESVLN 287 + DI++ +Q + + + E + Sbjct: 653 PVETIAVVRDISDRKQTELALRESEERLKTIISTNPNGLLILDLQGKVLFVNPAAEILFG 712 Query: 288 ESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGI-LQIKTSSGAETSA 346 L G+PI + S I Q G + +++ E +A Sbjct: 713 RKQEDLMGQILGIPIIVNNYS-----------EIEILQPSGKLIIVRMRLVKIIWQEKNA 761 Query: 347 FIERVADISQHMAALALEQEKSRQH--IEQLIQ 377 F+ + D++ ++++ I Sbjct: 762 FLASLVDVTDIQ--------QAQEQLKILYQAT 786 Score = 93.5 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 34/276 (12%), Positives = 80/276 (28%), Gaps = 38/276 (13%) Query: 131 QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYC-ISEASGMQPDTLLNIPE 189 + + A+ + + D + ++ N+AF EM+ Y E G I + Sbjct: 303 SENRISIKEFAITSSISAIAIGDLQGNLTYVNQAFLEMWRYDNDDEVLGKPFLNFWQIDQ 362 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 L Q + + E + + + S + V + ++++ D++ Sbjct: 363 QG----ETLIQTIRTRGQWIGELIAKKKDKSLFKAQVSANLVKNEANIAIYIMISVMDVS 418 Query: 250 EERQIRQL----EGNILAAMCSSPPFHEMGEIIC---RNIES---VLNESHVSLFA---- 295 +++ + ++P + E + S Sbjct: 419 QQQGTEESLQKLLRLYTNLTQAAPVGIFRADESGKWLYANEKALLISGISLDKAIGMGWA 478 Query: 296 -LRNGMPIHWASSSHGAEIQNAQSWSAT--IRQRDGAPAGILQ---IKTSSGAETSAFIE 349 + + IQ SW R DG +L + + ++ Sbjct: 479 NYVHNDDRARVFNEWIKSIQTQTSWRTEYRYRHSDGNNTWVLVQAIPEMDEQGKIVGYLG 538 Query: 350 RVADISQHMAALALEQEKSRQ---HI--EQLIQFDP 380 + DI+ E++ + + I + FD Sbjct: 539 TLTDIT--------ERKNAEEATNKINAQMQAIFDA 566 >UniRef50_A1SU67 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Alteromonadales RepID=A1SU67_PSYIN Length = 1014 Score = 849 bits (2194), Expect = 0.0, Method: Composition-based stats. Identities = 200/825 (24%), Positives = 365/825 (44%), Gaps = 48/825 (5%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + TDA ++ +F + +G + + NP ++ GY+ EE++ N L Sbjct: 196 QSTDALKESEFLFRSQFDLGSIGIAITYPGKGWLRVNPRLCEILGYREEELLLLNWSELT 255 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYY-LA 120 D R + + +G S + + +KDG ++ +S +G V + +A Sbjct: 256 HPDDRHL---DLYQYDQMLTGEEDGYSLDKRFIRKDGESVYVHMTISCYRVDGAVQFVIA 312 Query: 121 LVRDASVEMAQKE----QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 + D+S ++ + QL+ + + + E + V N + EM GY + Sbjct: 313 GILDSSERKHAEDKIRGRKEQLLSVLSGSELGFWDWNIEANTVHRNARWAEMLGYRFEDI 372 Query: 177 SGMQPDTL--LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV-YD 233 L ++ + + L +TA+ + E+ + TR GE WI V Y Sbjct: 373 QNDTSINLDSVHPNDCGRVWQSVTDHLEGRTAQHKIEYRMRTRQGEYKWILDCAKIVNYG 432 Query: 234 VLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLN 287 + T +DIT+ + + +S + + + Sbjct: 433 EDQQPLRMSGTHTDITKRKLAEESMQLASMVYQNSREAMTVTDSNGNIITTNPAFTEMTG 492 Query: 288 ESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGA----PAGILQI 336 S + + + + + W + R ++G GI I Sbjct: 493 YSADEITGKSHTFIVSKQQDKRVYQRMELALNSTGHWRGEVSCRHKNGENYMALLGINSI 552 Query: 337 KTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDD 396 + + +DI+ E++KS + I + FD +TGL NR H+ L Sbjct: 553 YN-EDRSVHRRVAQFSDIT--------ERKKSEKIIWKQANFDNLTGLSNRQMFHDQLLH 603 Query: 397 LVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEG 452 +KA + + +D + V D+LG+ DQ L++V R R ++ + R G Sbjct: 604 EKNKAQRRGLNVGLLFLDLDRFKAVNDTLGHNMGDQLLIDVAQRLRNCVRKRDLVSRFGG 663 Query: 453 TQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLL 509 +F ++ + ++ ++A ++ +++P ++ ++ +T SIGI++ G+ + LL Sbjct: 664 DEFTVIIGGLKNTQSVERVAQKILCELAEPFLLGEQNVYITPSIGITFYPKDGEATEMLL 723 Query: 510 STAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAET 569 A AM ++ G N + +F+ +M E V+ L L+ A+ NQL+L YQP + T Sbjct: 724 KNADQAMYSAKEKGRNCYHYFTNSMQEQVERGGQLANDLRYALKKNQLELYYQPIVALGT 783 Query: 570 GELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHI 629 G++ EAL RWH P G V P+ FIP+AEE G I IG WV +A Q+A WR + + Sbjct: 784 GQIRKAEALIRWHHPELGMVSPAEFIPIAEETGTIVEIGDWVFRQAADQVAHWRREYQND 843 Query: 630 PALSVNLSALHFRSN--QLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTE-IFKRIQI 686 +S+N S + FR + + + + G+ G + +EITE ++++ + + ++ Sbjct: 844 FQVSINKSPVQFREGGSDITSWLEHLLAL-GLPGQAVVIEITEGLLLDGSSRIVIDKLLA 902 Query: 687 LRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQS 746 RD G+ +S+DDFGTG+S +S L + +KID+SFV + + L EAI + Sbjct: 903 FRDSGIEVSLDDFGTGYSSMSYLRKFHIDNLKIDQSFVRNLKVDSDDMILCEAIIIMAHK 962 Query: 747 LNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 L + V+AEG+E +EQ +L C QGY F++PLP ++ + Sbjct: 963 LGMQVIAEGIENEEQRRLLSAAGCDYGQGYLFAKPLPEKDFSCLL 1007 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 38/300 (12%), Positives = 83/300 (27%), Gaps = 34/300 (11%) Query: 101 IWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQ 160 + ++A + ++ +R A KE D + + P + ++ Sbjct: 171 LPVLLLYPLITALLGMLFVQRLRRNQSTDALKESEFLFRSQFDLGSIGIAITYPGKGWLR 230 Query: 161 CNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGE 220 N E+ GY E + L + + D Q L + + + + GE Sbjct: 231 VNPRLCEILGYREEELLLLNWSELTHPDDRHLDLYQYDQMLTGEEDGYSLDKRFIRKDGE 290 Query: 221 KIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHE--MGEII 278 +++ +IS V +Q ++ D +E + + S E + Sbjct: 291 SVYVHMTISCYR-VDGAVQFVIAGILDSSERKHAEDKIRGRKEQLLSVLSGSELGFWDWN 349 Query: 279 CRNIESVLNESHVSLFALRNGMPIHWAS-----------SSHGAEIQNA-------QSWS 320 N + R + S + + Sbjct: 350 IEANTVHRNARWAEMLGYRFEDIQNDTSINLDSVHPNDCGRVWQSVTDHLEGRTAQHKIE 409 Query: 321 ATIRQRDGAPAGIL----QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLI 376 +R R G IL + + DI++ ++ + + + QL Sbjct: 410 YRMRTRQGEYKWILDCAKIVNYGEDQQPLRMSGTHTDITK--------RKLAEESM-QLA 460 >UniRef50_P76129 Heme-regulated cyclic di-GMP, cyclic AMP phosphodiesterase, n=48 Tax=Enterobacteriaceae RepID=DOS_ECOLI Length = 799 Score = 846 bits (2188), Expect = 0.0, Method: Composition-based stats. Identities = 799/799 (100%), Positives = 799/799 (100%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML Sbjct: 1 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA 120 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA Sbjct: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA 120 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ Sbjct: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN Sbjct: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 Query: 241 LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGM 300 LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGM Sbjct: 241 LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGM 300 Query: 301 PIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAA 360 PIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAA Sbjct: 301 PIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAA 360 Query: 361 LALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVDHIQDVIDS 420 LALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVDHIQDVIDS Sbjct: 361 LALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVDHIQDVIDS 420 Query: 421 LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSK 480 LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSK Sbjct: 421 LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSK 480 Query: 481 PIMIDDKPFPLTLSIGISYDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKE 540 PIMIDDKPFPLTLSIGISYDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKE Sbjct: 481 PIMIDDKPFPLTLSIGISYDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKE 540 Query: 541 RLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEE 600 RLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEE Sbjct: 541 RLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEE 600 Query: 601 IGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGID 660 IGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGID Sbjct: 601 IGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGID 660 Query: 661 GHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKID 720 GHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKID Sbjct: 661 GHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKID 720 Query: 721 KSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSR 780 KSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSR Sbjct: 721 KSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSR 780 Query: 781 PLPAEEIPGWMSSVLPLKI 799 PLPAEEIPGWMSSVLPLKI Sbjct: 781 PLPAEEIPGWMSSVLPLKI 799 >UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Cyanothece RepID=B7JWK6_CYAP8 Length = 1143 Score = 844 bits (2182), Expect = 0.0, Method: Composition-based stats. Identities = 193/829 (23%), Positives = 352/829 (42%), Gaps = 68/829 (8%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 K+ A ++ F + G +++N + F N AA++L+ E++ + Sbjct: 341 KIEIALKDSEERFRQIVTTISDGLIVVNLEGNIRFVNLAAQELFVRSETELLEHPF---- 396 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLAL 121 G V E+ ++ + I ++++ EG+ YL Sbjct: 397 ------------------GLPIVVDKITEICIQPSRNTLIVAEMRSAEITWEGEKGYLIS 438 Query: 122 VRDASVE----MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 +R+ + E + V+ + + + D I N +E+ GY + + Sbjct: 439 LRNITDSYQANQKLAESEEKYRKIVETTNEGIWISDHHNKITFVNHQMSEILGYTVDKMM 498 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 GM T ++ + + Q ++ + L + G ++W S + +++ Sbjct: 499 GMSLLTFIDAAQLS--LVEKSGQKTEQSLPGTHDLKLRRQDGSELWAIVSTNALFNPEGD 556 Query: 238 LQNLVMTFSDITEERQIRQLEGNILAAMCSSP----PFHEMGE---------------II 278 + +DIT+ ++ Q + + + + Sbjct: 557 YMGTLGLITDITKRKRTEQALYDSEKRLEGILNSLQDVIWSADPKTRQSLYLNPAIQLVY 616 Query: 279 CRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGI---LQ 335 R +E + H+ L + + E + + I + DG + + Sbjct: 617 GRPMEDFFRDPHLWLCMVHPEDQELVSHHLKLLEDKGSTEVHYRIIRPDGETRWLHSRSR 676 Query: 336 IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLD 395 + ++ +DI+ E++++ + ++ D +T LPNR + L+ Sbjct: 677 LVYDEQGKSLRIDGINSDIT--------ERKQAEEQLQYNATHDTLTQLPNRLLFMDRLE 728 Query: 396 DLVDKAVS-----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRI 450 +++ V + +D + + DSLG+A D+ L E+ R ++ L+ D L R+ Sbjct: 729 HALERRRRYSDPLFAVLFLDLDEFKVINDSLGHALGDELLREIARRLQKSLRADDTLARL 788 Query: 451 EGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGK--NRDY 507 G +F ++ E +DV + +IA+ + +++P ++ + SIGI+ G+ Sbjct: 789 GGDEFTILLEEIHDVKDAIKIAERIHKDLTRPFNLEGQEIFTNTSIGIALSNGEYEAASE 848 Query: 508 LLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFA 567 +L A AM + G + F M+ RL L L+ AI + + YQP I Sbjct: 849 ILRDADTAMYRAKAGGKACYAIFDQQMHASAVSRLQLETDLRRAIERQEFLVYYQPIISL 908 Query: 568 ETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ-- 625 + L G EAL RW P G VPP+RFIP+AEE G I IG W++ +A +QL W++Q Sbjct: 909 QHDTLTGFEALIRWQHPQQGLVPPARFIPIAEETGLIVPIGEWILEQAAQQLKIWQTQYR 968 Query: 626 NIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQ 685 N +SVNLS+ R L + + ID + L VEITES++ME+ + Sbjct: 969 NYESLKMSVNLSSKQLRDASLLGTIDRILSKTEIDNNALKVEITESILMENVQVAADVLI 1028 Query: 686 ILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQ 745 LR+ + + +DDFGTG+S LS L PV +KID+SFV R ++ AI S+ Sbjct: 1029 ALRERNIEICLDDFGTGYSSLSYLHRFPVNTLKIDRSFVMRMRPNDENSEIVRAIVSLAH 1088 Query: 746 SLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 L + ++AEG+ET+ Q L+ I C QGYFF++PL E+ + + Sbjct: 1089 ILGMEIIAEGIETELQLAQLKWIGCEQGQGYFFAKPLATSEVEALLKNP 1137 Score = 158 bits (400), Expect = 9e-37, Method: Composition-based stats. Identities = 58/372 (15%), Positives = 116/372 (31%), Gaps = 38/372 (10%) Query: 13 IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEY 72 F Q + L+N + + N A L GY +E+I + + + R + ++ Sbjct: 110 HFQNIFNQAKVAIALVNLQGKFVQVNQAFCDLIGYTSQELIKLQLSKITHPEERLSDSQW 169 Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRDASVEMA 130 + K E SRE + KKDGS IW + +S + + K Y++ ++ S Sbjct: 170 LNQLL---KNSCEAFSREKRYVKKDGSIIWGQVTVSVMKDQAKKPQYFIVIINAISDRQE 226 Query: 131 QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEF 190 + + + + + + N F + GY E ++ + Sbjct: 227 TERHRDR---FFVMSLDLLCIAGFDGYFKTLNPVFERILGYSSRELLAQPFIEFIHPDDR 283 Query: 191 PADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITE 250 + + L L E R G W+ + +P + + + DITE Sbjct: 284 -STSLAELANLRQGKETIHFENRYRCRDGSYRWLSWTSAPYMEE----KLIYAVARDITE 338 Query: 251 ERQIRQLEGNILAAMCSSPPFHEMG----------EIICRNIESVLNESHVSLFALRNGM 300 E++I + G + + + S L G+ Sbjct: 339 EKKIEIALKDSEERFRQIVTTISDGLIVVNLEGNIRFVNLAAQELFVRSETELLEHPFGL 398 Query: 301 PI-HWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMA 359 PI + + A +R + G ++ + +I+ Sbjct: 399 PIVVDKITEICIQPSRNTLIVAEMRSAEITWEGE-----------KGYLISLRNITDSYQ 447 Query: 360 ALALEQEKSRQH 371 A Q+ + Sbjct: 448 AN---QKLAESE 456 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 50/397 (12%), Positives = 120/397 (30%), Gaps = 63/397 (15%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 + ++ + + NP E++ GY E++ I D R Sbjct: 224 RQETERHRDRFFVMSLDLLCIAGFDGYFKTLNPVFERILGYSSRELLAQPFIEFIHPDDR 283 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDAS 126 + + R+G E + E + +DGS W + + E +Y A+ RD + Sbjct: 284 STSLAELANLRQG----KETIHFENRYRCRDGSYRWLSWTSAPYMEEKLIY--AVARDIT 337 Query: 127 VEM----AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPD 182 E A K+ + V + +IV++ E +I N A E+F +E Sbjct: 338 EEKKIEIALKDSEERFRQIVTTISDGLIVVNLEGNIRFVNLAAQELFVRSETELLEHPFG 397 Query: 183 TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 + + + + L I + + + + + Sbjct: 398 LPIVVDKITEICIQPSRNTL-------------------IVAEMRSAEIT--WEGEKGYL 436 Query: 243 MTFSDITEERQIRQLEG----NILAAMCSSPPFHEMGEIICRN------IESVLNESHVS 292 ++ +IT+ Q Q + ++ + + + + +L + Sbjct: 437 ISLRNITDSYQANQKLAESEEKYRKIVETTNEGIWISDHHNKITFVNHQMSEILGYTVDK 496 Query: 293 LFA------LRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQ---IKTSSGAE 343 + + S E + +R++DG+ + + + Sbjct: 497 MMGMSLLTFIDAAQLSLVEKSGQKTEQSLPGTHDLKLRRQDGSELWAIVSTNALFNPEGD 556 Query: 344 TSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDP 380 + + DI++ ++++ +D Sbjct: 557 YMGTLGLITDITK--------RKRTE-----QALYDS 580 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 79/257 (30%), Gaps = 12/257 (4%) Query: 128 EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI 187 K + + +++ + VQ N+AF ++ GY E +Q + + Sbjct: 101 HQELKRVNPHFQNIFNQAKVAIALVNLQGKFVQVNQAFCDLIGYTSQELIKLQLSKITHP 160 Query: 188 PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSD 247 E +D++ Q L E + + G IW + ++S + D Q ++ + Sbjct: 161 EERLSDSQWLNQLLKNSCEAFSREKRYVKKDGSIIWGQVTVSVMKDQAKKPQYFIVIINA 220 Query: 248 ITEERQIRQLEGNILAAMCSSPPFHEMGEI---ICRNIESVLNESHVSLFALRNGMPIHW 304 I++ ++ + + E +L S L A IH Sbjct: 221 ISDRQETERHRDRFFVMSLDLLCIAGFDGYFKTLNPVFERILGYSSRELLAQPFIEFIHP 280 Query: 305 ASSSHGAEI-------QNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQH 357 S + + R RDG+ + E + DI++ Sbjct: 281 DDRSTSLAELANLRQGKETIHFENRYRCRDGSYRWLSWTSAPYMEEKLIY-AVARDITEE 339 Query: 358 MAALALEQEKSRQHIEQ 374 + S + Q Sbjct: 340 KKIEIA-LKDSEERFRQ 355 >UniRef50_B2JAQ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Nostocaceae RepID=B2JAQ5_NOSP7 Length = 1043 Score = 843 bits (2180), Expect = 0.0, Method: Composition-based stats. Identities = 199/837 (23%), Positives = 347/837 (41%), Gaps = 62/837 (7%) Query: 7 DNAAD---GIFFPALEQNMMGAVLINE---NDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 + + A+ + G +L + ++ +++ NPA E + GY EVIG N L Sbjct: 220 LQEPEVDLHLMERAIAASSNGIILTDPNQPDNPIIYVNPAFELITGYCASEVIGRNCRFL 279 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYY 118 DL + +R + + L+ +KD W L+ V + Sbjct: 280 QGNDLEQVALQELRSAIQEQREC----HVILRNYRKDNFLFWNELYLAPVFDNSGYLTNF 335 Query: 119 LALVRDASVEMAQKE----QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS 174 + + D + + E Q Q V + +LD + N+ M GY I Sbjct: 336 IGIQTDITHHLQALEALGKQEEQYRRIVQTATEGIWLLDKDNCTTFVNQQMATMLGYTIE 395 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 E G + ++ N ++ ++ ++ +F + G +W S +P+ D Sbjct: 396 EMLGATLFSFMDSEGLEIANSCLSRR--YQGIQEAHDFKFRCQDGSDLWAIISCAPLLDD 453 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPF-----------HEMGEIICRNIE 283 + + ++IT+ + + + Sbjct: 454 QGNYAGALGMVTNITDRKLAEAALQESKQRLDGILCSLEDVIWSISADTFETLYLNPAAL 513 Query: 284 SVLNESHVSLFA--------LRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGI-- 333 V S F + ++ + Q I + DG + Sbjct: 514 KVYGYSVSEFFENSNLWFEVIHPEDQQQVHAAIQPLFLTEKQELEYRIVRPDGQVRWLLN 573 Query: 334 -LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHN 392 + ++ DI+ E++ + + +D +TGLPNR + Sbjct: 574 RSHLIYNASGLPIRIDGIATDIT--------ERKLLEEKLVHNAFYDALTGLPNRILFID 625 Query: 393 YLDDLVDKAVS-----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYL 447 L+ + + V + +D + V DSLG+ DQ L+ + R ++ L+PD + Sbjct: 626 RLEQAIAQMKHNPDDLFAVLFLDLDRFKVVNDSLGHLVGDQLLVTLAQRLQQCLQPDDTV 685 Query: 448 CRIEGTQFVLVS-LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGKN-- 504 R+ G +F ++ + + T IA + + P + +T SIGI+ G N Sbjct: 686 ARLGGDEFTILLSHIQTIEDATDIAKHIHQALKPPFNLCGYEVFMTASIGIAL--GTNKY 743 Query: 505 --RDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQ 562 LL A A+ ++ G F M + E L L L+ A+ +L + YQ Sbjct: 744 VQPADLLRDADTALYRAKEQSQAGHIVFDTTMYDRAVELLQLETDLRWAVERQELCIFYQ 803 Query: 563 PQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEW 622 P I +TG++ G EAL RW P G + P+ FIP+AEE G I IG+WV+ E+C+QL +W Sbjct: 804 PIICIKTGKITGFEALVRWQHPERGLISPTEFIPVAEETGLIIPIGQWVLTESCKQLRQW 863 Query: 623 RSQN--IHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEI 680 + Q I L+VNLS F L Q+S + G+ L +EITE+ ++ + Sbjct: 864 QLQFPAIKPLTLNVNLSGKQFSQPHLIEQISQILQDTGLSSSNLKLEITETAIIASPQKA 923 Query: 681 FKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAI 740 ++ L+ G+ L +DDFGTG+S L+ L + P+ +KID+SFV+R ++ A++ AI Sbjct: 924 TSILKQLKAFGLQLCIDDFGTGYSSLAYLHNFPIDVLKIDRSFVNRIDSDTEQFAIVRAI 983 Query: 741 TSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPL 797 ++ +L ++VVAEGVET Q L+ + C+ QGY FS+PL E+ ++S Sbjct: 984 VTLADNLGMSVVAEGVETINQLAQLQLLQCQQAQGYLFSKPLDQEQARNLLASGQSF 1040 Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 38/271 (14%), Positives = 106/271 (39%), Gaps = 16/271 (5%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 ++ +A + + ++ G L+++++ F N + GY EE++G + Sbjct: 346 LQALEALGKQEEQYRRIVQTATEGIWLLDKDNCTTFVNQQMATMLGYTIEEMLGATLFSF 405 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYY 118 + + I ++ + + + + + +DGS +W + + + + Sbjct: 406 MDSEGLE-----IANSCLSRRYQGIQEAHDFKFRCQDGSDLWAIISCAPLLDDQGNYAGA 460 Query: 119 LALVRDASVEM----AQKEQTRQLIIAVDHLDRPVIVLDPER-HIVQCNRAFTEMFGYCI 173 L +V + + A +E ++L + L+ + + + + N A +++GY + Sbjct: 461 LGMVTNITDRKLAEAALQESKQRLDGILCSLEDVIWSISADTFETLYLNPAALKVYGYSV 520 Query: 174 SEASGMQ--PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV 231 SE +++ + + Q L+ T + + E+ ++ G+ W+ + Sbjct: 521 SEFFENSNLWFEVIHPEDQQQVHAAI--QPLFLTEKQELEYRIVRPDGQVRWLLNRSHLI 578 Query: 232 YDVLAHLQNLVMTFSDITEERQIRQLEGNIL 262 Y+ + +DITE + + + + Sbjct: 579 YNASGLPIRIDGIATDITERKLLEEKLVHNA 609 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 93/295 (31%), Gaps = 36/295 (12%) Query: 103 TRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLD---PERHIV 159 LS VS ++ + S + + A+ +I+ D P+ I+ Sbjct: 196 VDVNLSIVSTTNNPNVQSVEK-ISPLQEPEVDLHLMERAIAASSNGIILTDPNQPDNPII 254 Query: 160 QCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTG 219 N AF + GYC SE G L + L+ + + + Sbjct: 255 YVNPAFELITGYCASEVIGRNC-RFLQGNDLEQVALQELRSAIQEQRECHVILRNYRKDN 313 Query: 220 EKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEG----NILAAMCSSPPFHEMG 275 W + ++PV+D +L N + +DIT Q + G + ++ + Sbjct: 314 FLFWNELYLAPVFDNSGYLTNFIGIQTDITHHLQALEALGKQEEQYRRIVQTATEGIWLL 373 Query: 276 E--------------IICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSA 321 + ++ IE +L + S + S IQ A + Sbjct: 374 DKDNCTTFVNQQMATMLGYTIEEMLGATLFSFMDSEGLEIANSCLSRRYQGIQEAHDFK- 432 Query: 322 TIRQRDGAPAGIL---QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIE 373 R +DG+ + + + V +I+ +++ + ++ Sbjct: 433 -FRCQDGSDLWAIISCAPLLDDQGNYAGALGMVTNIT--------DRKLAEAALQ 478 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 843 bits (2179), Expect = 0.0, Method: Composition-based stats. Identities = 196/766 (25%), Positives = 343/766 (44%), Gaps = 58/766 (7%) Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDAS 126 P HP+ I ++ E Q +D + ++ + L+ + Sbjct: 126 PFHPQEIHQLASALSSKWRT-EHEFQKVFEDLERR-IEDRTVELMNMNEHLIEELLEEID 183 Query: 127 VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 ++ RQL AV+ + + + D +R I+ N A EM GY + E G + Sbjct: 184 ERKRAEKHLRQLKQAVETMQLGITITDLDRKIIYMNPAGAEMHGYQVEELLGQDVSMFVP 243 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 R+++ E + + + G + V + +V + Sbjct: 244 PEHRKPLTLERIKEW----KGLIRESVNIRKDGTTFLVWLMSEIVKNAKGEPFAIVTSCE 299 Query: 247 DITEERQIRQLEG----NILAAMCSSPPFHEMGE------IICRNIESVLNESHVSLFAL 296 DITE +Q + + S+P + + V + Sbjct: 300 DITERKQAEEALRKSEERYRIVLESAPDPVVVYDTEGKVAYFNPAFSRVFGWTLDESIGR 359 Query: 297 RNGMPI---------HWASSSHGAEIQNAQSWSATIRQRDGAPAGIL---QIKTSSGAET 344 + + G + +++ T +DG G+ + + Sbjct: 360 NIDFLPVENVPENKLIFEKINCGKTLSGIETYCLT---KDGKKVGVNISGAGFFDNHDKL 416 Query: 345 SAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA--- 401 I + DI+ E++K+ + I+ L D +TGL NR + + L+D + ++ Sbjct: 417 QGSIITLQDIT--------ERKKTEEEIKFLAYHDVLTGLLNRKSFYTRLEDELIRSYSY 468 Query: 402 ----VSP-----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEG 452 ++ + VD + V D+LG+ D+ L V R + L+ Y+ R+ G Sbjct: 469 DGDRRRIKGHKWALFFLDVDRFKYVNDTLGHDVGDELLKVVAVRLKNCLRKSDYIFRLGG 528 Query: 453 TQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLL 509 +F ++ + D +++ ++A ++R +++P I D +T+SIGIS D G + + L+ Sbjct: 529 DEFTIILNDLTDDTDMAKVAQKIRKAIARPCRIKDHELYITVSIGISIYPDDGDDVETLV 588 Query: 510 STAHNAMDYIRKNGGN-GWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAE 568 A AM ++ N G++FF MN ER++L L+ A+ ++QL + YQP + Sbjct: 589 KNADIAMYAAKEE--NQGYRFFIEEMNRKTLERMMLENNLRNALQHDQLIIYYQPLVD-S 645 Query: 569 TGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIH 628 T ++ G+EAL RWH P G + PS+FIPLAEE G I IG+WV+ AC+Q +W Sbjct: 646 TNQIVGMEALLRWHHPELGLISPSQFIPLAEETGLIVPIGKWVLRCACQQARKWHEMGYT 705 Query: 629 IPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILR 688 ++VNLS FR L + + A + L +E+TES +MEH + ++++LR Sbjct: 706 RFYVAVNLSVRQFREPDLVETIEQILEATDLPPDCLKLEVTESGIMEHPEQAIAKMKMLR 765 Query: 689 DMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLN 748 G+ S+DDFGTG+S LS L P+ +KID+SFV T K +++ I ++ ++L Sbjct: 766 AKGIHFSIDDFGTGYSSLSYLKRFPIDTLKIDRSFVIDSTTNKDDQEIIKTIIAMARNLG 825 Query: 749 LTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 + VAEGVE KEQ + L C ++QGY+F RP+PAE+ + + Sbjct: 826 MDTVAEGVEAKEQQDFLIHHGCHMMQGYYFGRPMPAEKFEDMLQTR 871 Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 116/263 (44%), Gaps = 20/263 (7%) Query: 7 DNAADGIFFP---ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 A+ A+E +G + + + ++++ NPA ++ GY+ EE++G ++ M +P Sbjct: 185 RKRAEKHLRQLKQAVETMQLGITITDLDRKIIYMNPAGAEMHGYQVEELLGQDVSMFVPP 244 Query: 64 DLR-PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYLA 120 + R P E I+ +G+ RE +KDG+ W + K + + Sbjct: 245 EHRKPLTLERIKEW--------KGLIRESVNIRKDGTTFLVWLMSEIVKNAKGEPFAIVT 296 Query: 121 LVRDASVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 D + +E R + I ++ PV+V D E + N AF+ +FG+ + E+ Sbjct: 297 SCEDITERKQAEEALRKSEERYRIVLESAPDPVVVYDTEGKVAYFNPAFSRVFGWTLDES 356 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 G D L E +N++ +++ E LT+ G+K+ + S + +D Sbjct: 357 IGRNIDFL--PVENVPENKLIFEKINCGKTLSGIETYCLTKDGKKVGVNISGAGFFDNHD 414 Query: 237 HLQNLVMTFSDITEERQIRQLEG 259 LQ ++T DITE ++ + Sbjct: 415 KLQGSIITLQDITERKKTEEEIK 437 Score = 89.3 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 55/139 (39%), Gaps = 7/139 (5%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + +A ++ + LE V+ + +V +FNPA +++G+ +E IG NI + Sbjct: 306 QAEEALRKSEERYRIVLESAPDPVVVYDTEGKVAYFNPAFSRVFGWTLDESIGRNI-DFL 364 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYYL 119 P + P + G E KDG K+ + + + + + Sbjct: 365 PVENVPENKLIFEKINCGKTLSG----IETYCLTKDGKKVGVNISGAGFFDNHDKLQGSI 420 Query: 120 ALVRDASVEMAQKEQTRQL 138 ++D + +E+ + L Sbjct: 421 ITLQDITERKKTEEEIKFL 439 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 842 bits (2177), Expect = 0.0, Method: Composition-based stats. Identities = 197/699 (28%), Positives = 318/699 (45%), Gaps = 34/699 (4%) Query: 122 VRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 + E A K L A + LD + +Q + +FG + Sbjct: 235 AQHRRSEHALKLSEDNLNRAQSIVGIGSWHLDIVNNCLQWSDETYHIFGVAEGTPLNYEV 294 Query: 182 D-TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 ++ + NR Q LL + E +L GE W++ + +D + Sbjct: 295 FLEHVHADDRDLVNRTWQQALLRQ--PYDIEHRIL-VNGEIRWVREKANLDFDAHGNAVY 351 Query: 241 LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRN------IESVLNESHVSLF 294 + T DIT +Q SS + + R ++ + Sbjct: 352 AIGTVRDITRYKQEEATLRLAARVFDSSGEAILITDENVRVVAVNHSFVAMSGYRSEEVM 411 Query: 295 A-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG---ILQIKTSSGAET 344 L +G + +I W I + + G + + Sbjct: 412 GKNPRMLSSGRHDAEFYRAMWDDINQHGYWQGEIWDKHKSGRIYPKWMSITAVRDEHGKV 471 Query: 345 SAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS- 403 +I D + EQ ++ ++I L +D +TGLPNR L + L ++ A Sbjct: 472 VNYISIARDTT--------EQTEAEKNIHFLAYYDVLTGLPNRTLLRDRLGQMIAVAHRD 523 Query: 404 ---PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL 460 + + +D + + DS+G++ D+ L V R ++ ++ + R+ G +F+++ Sbjct: 524 KHQFSLIFLDLDRFKYINDSMGHSVGDRLLQSVALRIQDCVREGDTVARLGGDEFIVLLR 583 Query: 461 ENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDL--GKNRDYLLSTAHNAMDY 518 E S + +A +L ++ P +D + SIGIS ++ D L+ A AM Sbjct: 584 EAGESAASVVAQKLLIALATPYDLDGQVISTQASIGISIYPDQAQDADTLIKNADMAMYR 643 Query: 519 IRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEAL 578 ++ G N +QFF P MN V + L+ A+ +L L YQPQ +G L G+EAL Sbjct: 644 AKEEGRNNFQFFVPEMNFRVDLLFSMEKDLRLALERGELFLQYQPQADLASGTLSGVEAL 703 Query: 579 ARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSA 638 RW P+ G V P+ FIP+AEE G+I IG WV+ AC Q+AEWR +H ++VNLS Sbjct: 704 IRWDHPVKGQVSPAEFIPVAEETGQIVAIGEWVLRTACSQMAEWRKTGMHDLTIAVNLSI 763 Query: 639 LHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDD 698 R L + + G+D L +EITE +MM + F+ + ++D+GV LS+DD Sbjct: 764 RQLRQPDLAELIKSVLLETGLDARHLELEITEGIMMGDNQAAFRFLSEMQDLGVQLSIDD 823 Query: 699 FGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVET 758 FGTGFS L+ L +PV ++KID+SF+ T++ A++ +I S+G LNL V+AEGVET Sbjct: 824 FGTGFSSLNYLKQMPVNKLKIDQSFIRDIETDEGDAAIIRSIISLGHRLNLRVIAEGVET 883 Query: 759 KEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPL 797 +EQ + LR C IQGYF+SRPL AE+ ++ + L Sbjct: 884 QEQLDFLRIRGCDEIQGYFYSRPLLAEDFMRFVKAPPRL 922 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 41/260 (15%), Positives = 88/260 (33%), Gaps = 8/260 (3%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + A ++ A +G+ ++ + + ++ ++G G ++ + Sbjct: 239 RSEHALKLSEDNLNRAQSIVGIGSWHLDIVNNCLQWSDETYHIFGVAE----GTPLNYEV 294 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTR--FALSKVSAEGKVYYL 119 + A + + + E ++ +G W R L + VY + Sbjct: 295 FLEHVHADDRDLVNRTWQQALLRQPYDIEHRIL-VNGEIRWVREKANLDFDAHGNAVYAI 353 Query: 120 ALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 VRD + ++ R D +++ D +V N +F M GY E G Sbjct: 354 GTVRDITRYKQEEATLRLAARVFDSSGEAILITDENVRVVAVNHSFVAMSGYRSEEVMGK 413 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 P +L+ A+ + + + Q E ++G SI+ V D + Sbjct: 414 NP-RMLSSGRHDAEFYRAMWDDINQHGYWQGEIWDKHKSGRIYPKWMSITAVRDEHGKVV 472 Query: 240 NLVMTFSDITEERQIRQLEG 259 N + D TE+ + + Sbjct: 473 NYISIARDTTEQTEAEKNIH 492 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 841 bits (2175), Expect = 0.0, Method: Composition-based stats. Identities = 186/714 (26%), Positives = 316/714 (44%), Gaps = 40/714 (5%) Query: 109 KVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEM 168 ++S++ K+ R + +E ++L + + V+D +V+ N+A M Sbjct: 308 RLSSQQKLIVRHAQRLQATSNDLQESEKRLRTIFETEPECIKVVDRNGELVEMNQAGLAM 367 Query: 169 FGY-CISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKAS 227 + EA + + + A L + + EF + G ++ Sbjct: 368 LEAATLEEARQKKLIDYVAPEDQAAFLA--LHRRVMNGESAVLEFKITGLKGTLHHLETH 425 Query: 228 ISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMC--SSPPFHEMGEIICRNIESV 285 +P+ D ++ L+ D+T +Q A + I R ++ Sbjct: 426 ATPMPDANGNISLLLGITRDVTASMHAKQQLRIAATAFESQEGMLVTDAVGAILRVNQAF 485 Query: 286 LNESHVSLFALRNGMPIHWASSSH--------GAEIQNAQSWSATI--RQRDGAPAG--- 332 + + + P S H I+ W I R+++G Sbjct: 486 TRITGYTADEVIGKNPRILNSGRHDAYFYKEMWERIKRTGEWEGEIWNRRKNGDVYPEHL 545 Query: 333 ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHN 392 + +G ++ + DI+ + S + I L FDP+T LPNR L + Sbjct: 546 TITAVKDAGGNVVNYVATLMDITAS--------KASEEEIRNLAFFDPLTRLPNRRLLQD 597 Query: 393 YLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLC 448 L + + I +D+ +++ D+LG+ D L +V R ++ + Sbjct: 598 RLQQALASCGRSGKSGAILFIDLDNFKNLNDTLGHDIGDLLLEKVAIRLSSCVREGDTVA 657 Query: 449 RIEGTQFVLVSLEND------VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLG 502 RI G +FV++ + + ++ ++ P + + + SIG + Sbjct: 658 RIGGDEFVVMLEDLSDNILDAAEQTESVGSKILASLNVPYQLGIHTYDNSPSIGATLFND 717 Query: 503 K--NRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLV 560 + D LL A AM +K G N +FF P M + + RL L L++AI +Q +L Sbjct: 718 NHNSIDELLKQADIAMYQAKKAGRNTMRFFDPRMQQSLSARLALELELRKAIEKDQFQLY 777 Query: 561 YQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLA 620 YQ Q+ ET G EAL RW P HG + P+ FIP+AEE G I IG WV+ AC QL Sbjct: 778 YQIQVD-ETHRPLGAEALLRWMHPEHGLMAPAEFIPMAEETGLIVPIGWWVLETACTQLK 836 Query: 621 EWRSQNI-HIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTE 679 W + LS+N+SA F +QV A+ +GID L +E+TES+++E+ Sbjct: 837 AWEKDPLTRNLVLSINVSAKQFHQPDFVDQVQAAVDHYGIDPALLKLELTESILLENVDT 896 Query: 680 IFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEA 739 KR+ L+ GVG S+DDFGTG+S L L LP+ ++KID+SF+ ++ +A++ Sbjct: 897 TIKRMSALKKTGVGFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFMQEITSDSSDMAIVST 956 Query: 740 ITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 I ++ QS+ + V+AEGVET+EQ ++L + C QGY FS+P+P E+ + Sbjct: 957 IIAMAQSMQMGVIAEGVETEEQRQLLLRKGCNHFQGYLFSKPVPVEQFEKLLHR 1010 Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 91/257 (35%), Gaps = 10/257 (3%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLW-GYKREEVIGNNIDMLIPRDL 65 ++ E +++ N E++ N A + EE + + + Sbjct: 330 LQESEKRLRTIFETEPECIKVVDRNGELVEMNQAGLAMLEAATLEEARQKKLIDYVAPED 389 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA--EGKVYYLALVR 123 + A R G A + E ++ G+ + + L + R Sbjct: 390 QAAFLALHRRVMNGESAVL-----EFKITGLKGTLHHLETHATPMPDANGNISLLLGITR 444 Query: 124 DASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDT 183 D + M K+Q R A + ++V D I++ N+AFT + GY E G P Sbjct: 445 DVTASMHAKQQLRIAATAFE-SQEGMLVTDAVGAILRVNQAFTRITGYTADEVIGKNP-R 502 Query: 184 LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVM 243 +LN A + + + +T + E + G+ +I+ V D ++ N V Sbjct: 503 ILNSGRHDAYFYKEMWERIKRTGEWEGEIWNRRKNGDVYPEHLTITAVKDAGGNVVNYVA 562 Query: 244 TFSDITEERQIRQLEGN 260 T DIT + + N Sbjct: 563 TLMDITASKASEEEIRN 579 Score = 108 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 58/158 (36%), Gaps = 9/158 (5%) Query: 2 KLTDADNAADG-IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 +T + +A ++ G ++ + ++ N A ++ GY +EVIG N +L Sbjct: 445 DVTASMHAKQQLRIAATAFESQEGMLVTDAVGAILRVNQAFTRITGYTADEVIGKNPRIL 504 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYY 118 H Y R E+ +K+G ++ V G V Y Sbjct: 505 NSGR----HDAYFYKEMWERIKRTGEWEGEIWNRRKNGDVYPEHLTITAVKDAGGNVVNY 560 Query: 119 LALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDP 154 +A + D + A +E+ R L + L ++ D Sbjct: 561 VATLMDITASKASEEEIRNLAFFDPLTRLPNRRLLQDR 598 >UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=C6D7W4_PAESJ Length = 1095 Score = 841 bits (2173), Expect = 0.0, Method: Composition-based stats. Identities = 201/813 (24%), Positives = 360/813 (44%), Gaps = 48/813 (5%) Query: 11 DGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHP 70 + + L+ A +I+ ++ N AA KL GY ++E + + I + Sbjct: 140 EQRYITLLKNMFSAAFIIDLQGNILDVNDAAVKLTGYNKQEHV--HFSQFINPEDLEQAM 197 Query: 71 EYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS-AEGKVYYLALVRDASVEM 129 Y + EG E +S ++ + K+G + LS + + + + D S E Sbjct: 198 AYNQRALEG-----ETLSFQISILHKNGHNVDVMTTLSPIYMHDQITGIIGISNDISDET 252 Query: 130 AQKE----QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 K+ ++ + + D + + CN A + GY E L+ Sbjct: 253 RNKQLFQINKQRYESLFEQNPDAISYFDLNGNFMDCNSALENILGYSREELLYSNYSHLV 312 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 E R Q L T E + L + G +++K + P+ V + + Sbjct: 313 AEYERDRA-RFYFDQALQGT-VQSYELVCLHKQGHLVYMKLTKLPIT-VDNRIVGIYSIA 369 Query: 246 SDITEERQIR----QLEGNILAAMCSSPPFHEMG--EIICRNIESVLNESHV--SLFALR 297 DIT ++Q + E + + S + II +++ ++ + Sbjct: 370 KDITTKKQAENALIEAESKYRSLVEKSIVGVYIIQKNIILYANPYLIDMLGYKEAIIGMS 429 Query: 298 NGMPIHWASSSHGAE-----IQNAQSWSATIR--QRDGAPAGILQIKTSSGAETS-AFIE 349 ++ S + + +R +G + + S A I Sbjct: 430 IWDIVYPDDYSVVKQNIQILYNETDAIRHPLRVLTAEGKLLDVEMYSNRIMYQGSPAVIG 489 Query: 350 RVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA----VSPV 405 + D++ E++++ + L D +T LPNR L++ ++ A Sbjct: 490 TILDVT--------ERKRAEELNAFLAYHDSLTELPNRRKFEEMLENALETAKTARRHFA 541 Query: 406 VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL-ENDV 464 V + +D + + DSLG+A DQ L+ R +E+++ + R+ G +F ++ D Sbjct: 542 VMYLDMDRFKYINDSLGHAVGDQLLIAFSKRLQEQIRETDFAARMGGDEFTVILPHIRDN 601 Query: 465 SNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKN 522 ++ ++A + +P I+D +T SIGIS G + L+ A +A+ + Sbjct: 602 NSAIEVARRIIERTREPFYIEDYELFITTSIGISIYPNDGDDSSTLMKNADSALFRAKDL 661 Query: 523 GGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWH 582 G NG+Q F+ +MN + L L++AI ++L++ YQP++ TGE+ G EAL RW+ Sbjct: 662 GKNGYQIFTSSMNVQTYKVFTLEKDLRKAIQRDELEMYYQPKVNIHTGEIVGAEALIRWN 721 Query: 583 DPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFR 642 P G V P+ FIP++EE G I ++G WV CRQ EW+ + +S+N++A F Sbjct: 722 HPEWGLVSPNEFIPISEETGLILSLGNWVKRTVCRQNKEWQLAGLKPIPISINVTAKRFL 781 Query: 643 SNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTG 702 S + + + G++ H L +EITES ++E+ + + L +GV +S+DDFGTG Sbjct: 782 SKDFMDAIQQILAETGLEPHYLEIEITESSLLENAETVMHTLDSLNKLGVTISLDDFGTG 841 Query: 703 FSGLSRLVSLP--VTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKE 760 +S LS L + +KID+SF+ A++ AI + Q +N++VVAEGVET E Sbjct: 842 YSSLSYLKRFKHTINILKIDRSFIHDLHQGSDDNAIISAIIQLAQHMNMSVVAEGVETGE 901 Query: 761 QFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 Q +L+ + C ++QGY FSRP+ AE + Sbjct: 902 QLHILKLLKCDLVQGYLFSRPVQAEAFAQLLKR 934 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 52/377 (13%), Positives = 121/377 (32%), Gaps = 42/377 (11%) Query: 16 PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRH 75 + +L + N ++ N A GY EE L+P + R E+ + Sbjct: 28 TMFDFRSDIFLLFDHNGRLIEANQAFTDTLGYSLEEFKHLTYGSLLPGNQRQRAKEHFQK 87 Query: 76 NREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV-YYLALVRDASVEMAQKEQ 134 G E+++ K G I + + A+ +D S +++ Sbjct: 88 LLHGEIQ-----IFEIRVLHKTGQFIDLTVTAFPRKLNDAIDGFYAIAKDLSDIKLMEQR 142 Query: 135 TRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADN 194 I + ++ ++D + +I+ N A ++ GY E +N + Sbjct: 143 ---YITLLKNMFSAAFIIDLQGNILDVNDAAVKLTGYNKQEHV--HFSQFINPEDLEQAM 197 Query: 195 RIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQI 254 Q + + +L + G + + ++SP+Y + + ++ +DI++E + Sbjct: 198 A--YNQRALEGETLSFQISILHKNGHNVDVMTTLSPIY-MHDQITGIIGISNDISDETRN 254 Query: 255 RQ----LEGNILAAMCSSPPFHEMGEIIC------RNIESVLNESHVSLFALRNGMPIHW 304 +Q + + +P ++ +E++L S L N + Sbjct: 255 KQLFQINKQRYESLFEQNPDAISYFDLNGNFMDCNSALENILGYSREELL-YSNYSHLVA 313 Query: 305 ASSSHGAEIQNAQSWSATIR-------QRDGAPAGILQIKTSS--GAETSAFIERVADIS 355 A Q+ T++ + G + K DI+ Sbjct: 314 EYERDRARFYFDQALQGTVQSYELVCLHKQGHLVYMKLTKLPITVDNRIVGIYSIAKDIT 373 Query: 356 QHMAALALEQEKSRQHI 372 ++++ + Sbjct: 374 T--------KKQAENAL 382 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 94/252 (37%), Gaps = 15/252 (5%) Query: 10 ADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAH 69 + EQN + N M N A E + GY REE++ +N L+ R Sbjct: 261 NKQRYESLFEQNPDAISYFDLNGNFMDCNSALENILGYSREELLYSNYSHLVAEYERDRA 320 Query: 70 PEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK-VYYLALVRDASVE 128 Y +G S EL K G ++ + ++ + + V ++ +D + + Sbjct: 321 RFYFDQALQGTVQ-----SYELVCLHKQGHLVYMKLTKLPITVDNRIVGIYSIAKDITTK 375 Query: 129 MAQK----EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 + E + V+ V ++ I+ N +M GY GM + Sbjct: 376 KQAENALIEAESKYRSLVEKSIVGVYIIQKN-IILYANPYLIDMLGY-KEAIIGMSIWDI 433 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 + ++ + + +Q L +T + +LT G+ + ++ + + ++ T Sbjct: 434 VYPDDY-SVVKQNIQILYNETDAIRHPLRVLTAEGKLLDVEMYSNRIM--YQGSPAVIGT 490 Query: 245 FSDITEERQIRQ 256 D+TE ++ + Sbjct: 491 ILDVTERKRAEE 502 Score = 83.9 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 29/221 (13%), Positives = 79/221 (35%), Gaps = 35/221 (15%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + +A A+ + +E++++G +I + + +++ NP + GY +E +IG +I ++ Sbjct: 377 QAENALIEAESKYRSLVEKSIVGVYII-QKNIILYANPYLIDMLGY-KEAIIGMSIWDIV 434 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLAL 121 D ++ N + + + L++ +G + +++ +G + Sbjct: 435 YPDD----YSVVKQNIQILYNETDAIRHPLRVLTAEGKLLDVEMYSNRIMYQGSPAVIGT 490 Query: 122 VRDASVEMAQKE---------------QTRQLIIAVDHLDR---------PVIVLDPERH 157 + D + +E R+ +++ V+ LD + Sbjct: 491 ILDVTERKRAEELNAFLAYHDSLTELPNRRKFEEMLENALETAKTARRHFAVMYLDMD-R 549 Query: 158 IVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRL 198 N + G+ + + + L D R+ Sbjct: 550 FKYINDS----LGHAVGDQLLIAFSKRLQEQIRETDFAARM 586 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 840 bits (2171), Expect = 0.0, Method: Composition-based stats. Identities = 198/874 (22%), Positives = 341/874 (39%), Gaps = 96/874 (10%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 T + L+ I + ++ + L IG I ++P Sbjct: 287 TQQLADSSSQLRATLDAIPDLLFEIGLDGHFYSYHSSRNDLLTAPATSFIGKKIGDVLPP 346 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA--EGKVYYLAL 121 D ++ G++ + + L G W ++SK ++ L Sbjct: 347 DAADICMSALQEANMTGRSNGKTYALSL----PQGES-WFELSISKKQDAKNQAPRFIVL 401 Query: 122 VRDASVEMAQKE---QTRQLIIAVDHLDRPVIVLDPERHIV------QCNRAFTEM---- 168 VRD + + + +L A+ ++ ++ + + N +M Sbjct: 402 VRDVTQRKVNETHILRLTKLYAALSQCNQAIVRCSNKTELFPIICRDAVNFGGMKMAWIG 461 Query: 169 --------------FGYCISEASGMQPDTLLNIPE------FPADNRIRLQQLLWKTARD 208 +G + + P + Sbjct: 462 ILDQVTGLVEPVASYGAGTEYLDNLHVSIDGHEPGGSGPTGIALREDRPFWCQDFANDPV 521 Query: 209 QDEFLLLTRTGEK-----IWIKASISPV---------YDVLAHLQN--LVMTFSDI---- 248 + I + V + L+ DI Sbjct: 522 TAVWHERAAEYGWGASASIPLHCHGIVVGTLTLYAEEKNAFDEPARNLLLEMAMDISFAL 581 Query: 249 ------TEERQIRQLEGNILAAMCSSPPFHEMGEII------CRNIESVLNESHVSLFA- 295 TE +++ + + A+ SP + ++ N V S + Sbjct: 582 ERFDAETERKKMSETLLKLSLAVEQSPNSIVITDLDANIEYANSNFTKVTGYSLDEVLGK 641 Query: 296 ----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQIKTSS---GAETSA 346 +++G A + + W + R++DG + + Sbjct: 642 NPRFMQSGKTPKATYEDMWAHLTRGEPWKGELFNRRKDGTEYIESVLISPVSQVDGRVMN 701 Query: 347 FIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPV- 405 ++ DI+ E+ + + IE+L FD +TGLPNR L+ + A Sbjct: 702 YLAIKEDIT--------EKRLTEERIEKLEHFDHLTGLPNRTQLNERFKYALSLAQRSGE 753 Query: 406 ---VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN 462 V + +DH +D+ D+LG++ DQ L++V R +E L+ + + R G +F+L+ Sbjct: 754 QMTVMFLDLDHFKDINDTLGHSIGDQLLMDVAKRLKETLRDEDTVSRQGGDEFILILPGT 813 Query: 463 DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIR 520 D + +A +L VS+ + T SIGI+ G+N + L A AM ++ Sbjct: 814 DENGAAHVAAKLMEAVSQAFQFEQHELVATCSIGIAIYPHDGENFETLSKNADTAMYRVK 873 Query: 521 KNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALAR 580 +G NG+ FF+ M L LG AL+ A++ QL L YQPQI + G + G EAL R Sbjct: 874 HDGRNGFCFFTSEMQAHSARTLQLGNALRHALTRGQLHLHYQPQISTQDGHVVGAEALLR 933 Query: 581 WHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALH 640 W P G + P+ FIP+AE+ G+I IG WV+ A +QL +W + ++VNLSA Sbjct: 934 WQHPELGSISPAEFIPIAEDNGQIIPIGEWVLRTAIKQLKDWMDSGLPPMIMAVNLSAAQ 993 Query: 641 FRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFG 700 FR + L V+ + + L +E+TE++ M+ + L G+ +S+DDFG Sbjct: 994 FRQSNLMELVTSILDESKVPHRYLELELTEAVAMDDPQLAIGVMDKLHTGGIKMSIDDFG 1053 Query: 701 TGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKE 760 TG+S LS L V ++KID+SFV + A++ AI ++ SL + +AEGVET Sbjct: 1054 TGYSSLSYLKRFKVYKLKIDQSFVHDITDDPDDKAIVAAIINMASSLGMQTIAEGVETAG 1113 Query: 761 QFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 Q LR C +QGY+FS+PLPAE+ ++ Sbjct: 1114 QLSFLRLQGCNEVQGYYFSKPLPAEQFVSYLQKQ 1147 >UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTL1_METML Length = 976 Score = 840 bits (2171), Expect = 0.0, Method: Composition-based stats. Identities = 191/720 (26%), Positives = 320/720 (44%), Gaps = 44/720 (6%) Query: 103 TRFALSKVSAEGKVYYLALVRDASVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERHI 158 + ++ + + R E+ + + A++ V + Sbjct: 249 IEKRDQALLSKNEQLEEEVARRTQALKENIEELKNSEFRWKFAIEGAGDGVWDWNIATDE 308 Query: 159 VQCNRAFTEMFGYCISEAS--GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLT 216 Q ++ + EM GY +E + ++ + + L KTA E+ L Sbjct: 309 AQYSKRWKEMLGYDENELLPTNQEWADRVHHDDVAYVKQTMQDYLEGKTALYVVEYRLKC 368 Query: 217 RTGEKIWIKASISPV-YDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMC--SSPPFHE 273 + WI V D + ++ T +DITE ++I Q A Sbjct: 369 KDNRYKWILGRGMIVSRDDQGNPLRMIGTHTDITERKKIEQQLRIAATAFESQEGIVVTN 428 Query: 274 MGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQN--------AQSWSATI-- 323 I R ++ ++ + P S E SWS I Sbjct: 429 ENFNILRVNQAFIDITGYEAEEATGKKPNILKSGRQSGEFYRNIYTSLRETGSWSGEIIN 488 Query: 324 RQRDGAPAG---ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDP 380 R+++G + + +T+ ++ DIS + + + IE L FDP Sbjct: 489 RRKNGEIYPEHLTITAVKDADGQTTNYVGMFTDISVA--------KAASERIENLAFFDP 540 Query: 381 MTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNR 436 +T LPNR + L + + + + +DH + + D+LG+ + D L +V R Sbjct: 541 LTNLPNRRLFSDRLTQALVNSTRSGNYGALVFLDLDHFKSLNDTLGHDYGDMLLKQVALR 600 Query: 437 FREKLKPDQYLCRIEGTQFVLVSLENDVSNITQ------IADELRNVVSKPIMIDDKPFP 490 ++ + R+ G +FVL+ +++ I D++ +++P + + Sbjct: 601 LSNCVREGDSVARLGGDEFVLLVENLSANDVEAAHQIEAIGDKILMSLNQPYQLQSHEYL 660 Query: 491 LTLSIGISYDLG--KNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAAL 548 T SIGIS G ++ + LL A AM +K G N +FF P M E + R+ L L Sbjct: 661 STPSIGISLFNGHQESSEDLLKHADIAMYQAKKAGRNTLRFFDPLMQETINMRVDLEREL 720 Query: 549 KEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIG 608 K+AI Q +L YQ Q+ + G+ G EAL RW P G + P +FIP+AEE G I IG Sbjct: 721 KKAIEQKQFELYYQVQMNSA-GQPSGAEALIRWRHPERGIISPIQFIPVAEETGLITQIG 779 Query: 609 RWVIAEACRQLAEWR-SQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVE 667 WV+ +AC QL W+ Q +L++N+SA F NQV +++ ++ ID +L +E Sbjct: 780 EWVLNQACLQLQAWQLDQASKDFSLAINVSAKQFLQPDFANQVKNSIRSFHIDNTKLKLE 839 Query: 668 ITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRC 727 +TESM++++ + + L ++G+ S+DDFGTG+S L L LP++++KID+SFV Sbjct: 840 LTESMLIDNIEYVIHTMNTLGEIGIQFSLDDFGTGYSSLQYLKMLPLSQLKIDQSFVRDL 899 Query: 728 LTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 T+ ++ I ++ SL L V+AEGVET EQ ++L C QGY+FS PL E Sbjct: 900 ATDNSNKTIVLTIITMAHSLGLNVIAEGVETDEQLQLLNAHGCGNYQGYYFSEPLSINEF 959 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 97/261 (37%), Gaps = 10/261 (3%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVI--GNNIDMLIP 62 + ++ + A+E G N + ++ +++ GY E++ + Sbjct: 279 EELKNSEFRWKFAIEGAGDGVWDWNIATDEAQYSKRWKEMLGYDENELLPTNQEWADRVH 338 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFA---LSKVSAEGKVYYL 119 D + ++ EG A E +L+ KD W +S+ + + Sbjct: 339 HDDVAYVKQTMQDYLEGKTAL---YVVEYRLKCKDNRYKWILGRGMIVSRDDQGNPLRMI 395 Query: 120 ALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 D + ++Q R A + ++V + +I++ N+AF ++ GY EA+G Sbjct: 396 GTHTDITERKKIEQQLRIAATAFE-SQEGIVVTNENFNILRVNQAFIDITGYEAEEATGK 454 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 +P +L + + L +T E + + GE +I+ V D Sbjct: 455 KP-NILKSGRQSGEFYRNIYTSLRETGSWSGEIINRRKNGEIYPEHLTITAVKDADGQTT 513 Query: 240 NLVMTFSDITEERQIRQLEGN 260 N V F+DI+ + + N Sbjct: 514 NYVGMFTDISVAKAASERIEN 534 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 54/166 (32%), Gaps = 10/166 (6%) Query: 2 KLTDADN-AADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 +T+ ++ G V+ NEN ++ N A + GY+ EE G ++L Sbjct: 400 DITERKKIEQQLRIAATAFESQEGIVVTNENFNILRVNQAFIDITGYEAEEATGKKPNIL 459 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YY 118 I + S E+ +K+G ++ V Y Sbjct: 460 KSGRQSGEFYRNIYTSLR----ETGSWSGEIINRRKNGEIYPEHLTITAVKDADGQTTNY 515 Query: 119 LALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIVQCN 162 + + D SV A E+ L + +L + D + N Sbjct: 516 VGMFTDISVAKAASERIENLAFFDPLTNLPNRRLFSDRLTQAL-VN 560 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 840 bits (2171), Expect = 0.0, Method: Composition-based stats. Identities = 196/696 (28%), Positives = 330/696 (47%), Gaps = 33/696 (4%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDP-ERHIVQCNRAFTEMFGYCISEASGM 179 + R + + E ++ D + + V N+AF E+ GY + E + Sbjct: 541 IARSQTFQATLMESEQRYRTLFDKAPVGHALKRLEDGQFVAINQAFMEITGYTLEELQAI 600 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 P L I ++ +L++L + + G+ + ++ + S V Q Sbjct: 601 DPWELTPIRYQSSET-EQLERLKQTRRYGPYQKHYRHKDGQLVAVRLNGSLVTAANGE-Q 658 Query: 240 NLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESHVSL 293 ++ DITE+ + + S + + + + S + Sbjct: 659 LILFIVEDITEQERTVARVNLLAQVFQQSGEGITIMDANDIIVDVNSAFTQITGYSRDEI 718 Query: 294 FALRNGMPIHWASSS-----HGAEIQNAQSWSATI--RQRDGAPAG---ILQIKTSSGAE 343 + A ++ W + R ++G ++ I Sbjct: 719 IGKNCRFLEAERTDRSIDAQVRAALEQTGFWQGEVWDRHKEGFDFPKWLMMSIVRDETGA 778 Query: 344 TSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA-- 401 S +I DIS E++ + + I L D +T LPNR +L + L+ + +A Sbjct: 779 ISHYIGSFTDIS--------ERKVNEERIHFLAHHDSLTLLPNRLSLQSRLEKVFQEAFI 830 Query: 402 --VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVS 459 V I +DH +++ D+LG+ D LLEV R + + D + R+ G +FV+V Sbjct: 831 SQTQIAVMFIDMDHFKNINDTLGHHVGDMLLLEVARRLKNIMGNDDIVARLGGDEFVVVL 890 Query: 460 LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMD 517 + D + ++A+ LR+ +++ +ID+KP + SIGIS G + + L+ A AM Sbjct: 891 SDTDHDRVAKVAEALRSGLNQTYLIDNKPLHSSPSIGISLFPTDGDSVEALMKNADMAMY 950 Query: 518 YIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEA 577 + G N +QFF+ AMN +V ER + L++AI+ N+L L YQPQ+ +G++ G+EA Sbjct: 951 RAKAAGRNNYQFFTAAMNTLVTERQQIETGLRQAIACNELLLYYQPQVDISSGQVVGVEA 1010 Query: 578 LARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLS 637 L RW P G V P RFIP+AEEI I IG+WV+ A QLAEWR + ++VNLS Sbjct: 1011 LIRWQHPELGLVAPDRFIPIAEEIDMIIPIGQWVLENALAQLAEWRDKGAKGLRMAVNLS 1070 Query: 638 ALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVD 697 A R + + + + + + L +EITES+ M++ + K + LR G+ L++D Sbjct: 1071 AHQLRKDTIVADIINVLTKHKLGKGALELEITESVAMQYPEQNAKLLAELRQHGIELAID 1130 Query: 698 DFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVE 757 DFGTG+S LS L LP+ +K+D+SFV ++ A+ A S+ L LTVVAEGVE Sbjct: 1131 DFGTGYSSLSYLKLLPLDRLKLDRSFVKDIESDPNDAAISAATISMAHELGLTVVAEGVE 1190 Query: 758 TKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 + Q +L + C ++QGY+FS+PL A++ ++ Sbjct: 1191 NEAQLVLLSGMGCDLVQGYYFSKPLAADDCFRFIER 1226 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 94/255 (36%), Gaps = 7/255 (2%) Query: 7 DNAADGIFFPALEQNMMGAVLIN-ENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 ++ + ++ +G L E+ + + N A ++ GY EE+ + L P Sbjct: 551 LMESEQRYRTLFDKAPVGHALKRLEDGQFVAINQAFMEITGYTLEELQAIDPWELTPIRY 610 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA-EGKVYYLALVRD 124 + + E + ++ + + KDG + R S V+A G+ L +V D Sbjct: 611 QSSETEQLERLKQTRRY----GPYQKHYRHKDGQLVAVRLNGSLVTAANGEQLILFIVED 666 Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 + + + L + ++D IV N AFT++ GY E G Sbjct: 667 ITEQERTVARVNLLAQVFQQSGEGITIMDANDIIVDVNSAFTQITGYSRDEIIGKNC-RF 725 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 L +++ L +T Q E + G +S V D + + + + Sbjct: 726 LEAERTDRSIDAQVRAALEQTGFWQGEVWDRHKEGFDFPKWLMMSIVRDETGAISHYIGS 785 Query: 245 FSDITEERQIRQLEG 259 F+DI+E + + Sbjct: 786 FTDISERKVNEERIH 800 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 54/143 (37%), Gaps = 8/143 (5%) Query: 2 KLTDADN--AADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDM 59 +T+ + A + +Q+ G +++ ND ++ N A ++ GY R+E+IG N Sbjct: 666 DITEQERTVARVNLLAQVFQQSGEGITIMDANDIIVDVNSAFTQITGYSRDEIIGKNCRF 725 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVY 117 L + +R E + E+ K+G W ++ + + Sbjct: 726 LEAERTDRSIDAQVRAALE----QTGFWQGEVWDRHKEGFDFPKWLMMSIVRDETGAISH 781 Query: 118 YLALVRDASVEMAQKEQTRQLII 140 Y+ D S +E+ L Sbjct: 782 YIGSFTDISERKVNEERIHFLAH 804 >UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodoferax ferrireducens T118 RepID=Q21R50_RHOFD Length = 1052 Score = 840 bits (2171), Expect = 0.0, Method: Composition-based stats. Identities = 184/690 (26%), Positives = 301/690 (43%), Gaps = 38/690 (5%) Query: 133 EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPA 192 ++ L +D + ++D + I + N+ +FGY + E GM+ L++ + Sbjct: 371 QREALLQQILDTSSVAIFLVDRQGRITKANQRMATLFGYPLHELQGMEYVALVHPAQRET 430 Query: 193 DNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER 252 + L L E L + W + D Q LV +DIT+ R Sbjct: 431 GRKNMLALLDSALQSVDLERLYWRADQTEFWGHLTGQRFVDGNGEEQGLVGVIADITQRR 490 Query: 253 QIRQLEGNILAAMC--SSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSH- 309 Q A + ++ R + + S P +S H Sbjct: 491 QTEAELRIAAIAFESEQGMAITDPQGVMLRVNRAFSAITGYSAPEAVGQNPRLLSSGRHD 550 Query: 310 -------GAEIQNAQSWSATI--RQRDGAPAGIL---QIKTSSGAETSAFIERVADISQH 357 + +W I R+++G + + ++ D+S Sbjct: 551 AAFYAAMWDSLVREGAWQGEIWNRRKNGEVFPEWLTISAVKDPAGQATHYVATFTDLST- 609 Query: 358 MAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDH 413 ++ + I+ L +D +TGLPNR L + L + + I +D Sbjct: 610 -------RKSAEDQIKSLAFYDTLTGLPNRRLLLDRLKQALASGARHRRQGALLYIDLDD 662 Query: 414 IQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL------ENDVSNI 467 + + ++ G+ DQ L EV R L+ + R G FV++ + Sbjct: 663 FKTLNNTYGHDVGDQLLQEVAQRLSHYLRAGDTVARPGGDSFVVLLEALSTNSVEAATEA 722 Query: 468 TQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLG---KNRDYLLSTAHNAMDYIRKNGG 524 +++R +S+P I D T SIG++ + D L A AM + G Sbjct: 723 ENTGEKIRLALSQPYQIADHAHRSTASIGVTLFDDRQQEGIDEPLKRAELAMYQAKTAGR 782 Query: 525 NGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDP 584 N +FF P M V L A L+EA+ +NQ L YQ Q+ E ++ G+EAL RW P Sbjct: 783 NTLRFFDPQMQTAVMAMAALEADLREAVRSNQFLLYYQAQVSGE-RQVAGVEALVRWQHP 841 Query: 585 LHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN-IHIPALSVNLSALHFRS 643 + G VPP+ FIPLAE+ G I +G+WV+ AC QLA W SQ ++VN+SAL F Sbjct: 842 VRGLVPPAEFIPLAEQTGLILPLGQWVLETACAQLAAWASQPERAHLTVAVNVSALQFHQ 901 Query: 644 NQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGF 703 QV A+ G + +L +E+TES+++ ++ ++ L++ GVG S+DDFGTG+ Sbjct: 902 ADFVAQVLAALKRAGANPQRLKLELTESLLVHDAEDVIAKMITLKEQGVGFSLDDFGTGY 961 Query: 704 SGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFE 763 S LS L LP+ ++KID+ FV L + A+ + + ++ +L L+V+AEGVET+ Q + Sbjct: 962 SSLSYLKRLPLNQLKIDQGFVRDILHDANDAAIAKMVVALADTLGLSVIAEGVETEAQRD 1021 Query: 764 MLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 L C QG+ +SR LP + +M Sbjct: 1022 FLAAQGCHAYQGHLYSRALPIDAFEAFMRQ 1051 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 92/255 (36%), Gaps = 7/255 (2%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 + + L+ + + L++ + N L+GY E+ G L+ R Sbjct: 369 LGQREALLQQILDTSSVAIFLVDRQGRITKANQRMATLFGYPLHELQGMEYVALVHPAQR 428 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRD 124 + + + V+ E + D ++ W + + ++ D Sbjct: 429 ETGRKNMLALLDSALQSVD---LERLYWRADQTEFWGHLTGQRFVDGNGEEQGLVGVIAD 485 Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 + + + R IA + ++ + + DP+ +++ NRAF+ + GY EA G P L Sbjct: 486 ITQRRQTEAELRIAAIAFE-SEQGMAITDPQGVMLRVNRAFSAITGYSAPEAVGQNP-RL 543 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 L+ A + L + Q E + GE +IS V D + V T Sbjct: 544 LSSGRHDAAFYAAMWDSLVREGAWQGEIWNRRKNGEVFPEWLTISAVKDPAGQATHYVAT 603 Query: 245 FSDITEERQIRQLEG 259 F+D++ + Sbjct: 604 FTDLSTRKSAEDQIK 618 Score = 105 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 52/158 (32%), Gaps = 9/158 (5%) Query: 2 KLTDADN-AADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 +T A+ ++ G + + ++ N A + GY E +G N +L Sbjct: 485 DITQRRQTEAELRIAAIAFESEQGMAITDPQGVMLRVNRAFSAITGYSAPEAVGQNPRLL 544 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYY 118 H R E+ +K+G W + K A +Y Sbjct: 545 SSGR----HDAAFYAAMWDSLVREGAWQGEIWNRRKNGEVFPEWLTISAVKDPAGQATHY 600 Query: 119 LALVRDASVEMAQKEQTRQL--IIAVDHLDRPVIVLDP 154 +A D S + ++Q + L + L ++LD Sbjct: 601 VATFTDLSTRKSAEDQIKSLAFYDTLTGLPNRRLLLDR 638 >UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFI2_HAHCH Length = 913 Score = 840 bits (2170), Expect = 0.0, Method: Composition-based stats. Identities = 174/820 (21%), Positives = 327/820 (39%), Gaps = 46/820 (5%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREE--VIGNNIDMLIPR 63 A + A + +G + + ++++ + G + + Sbjct: 85 ALRESRNNLDKAQQIARLGNWVWDLKRNEVYWSDQVYRNLGLSLHDNKASYEKFLECVHP 144 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWT--RFALSKVSAEGKVYYLAL 121 D R + + E + E ++ DG + + V Sbjct: 145 DDRARIVKLVDEALE----NKQVYGIEHRVIWPDGEERIVCGAGEVIFDVQGNPVQMHGT 200 Query: 122 VRDASVEMAQKEQTRQLIIAV----DHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 ++D + + + + + ++ LDP IV N GY SE Sbjct: 201 IQDITERKRDENRKNEYAHLIYDLYNNAPCGYHSLDPRGVIVDINETALRWLGYSRSELV 260 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 G L + +L QL A E + + G + + + + Sbjct: 261 GKVMFCDLLSEDCVQLCWDKLGQLKKGGALSNLELNIRCKDGRLFCVLLTSTALQSEDGE 320 Query: 238 LQNLVMTFSDITEERQIRQLEGN---ILAAMCSSPPFHEMGEIICRNIESVLNESHVSLF 294 + D TE R+ + + A+ + + I + + + +L Sbjct: 321 FRGSRCILVDYTERRRHEKELQQAAVVFDAIREAVIITDDARNIVAVNNAFTDITGYTLD 380 Query: 295 ALRNGMPIHWASSSH--------GAEIQNAQSWSATI--RQRDGAPAGILQ---IKTSSG 341 + P S H I W I ++R+G Q + Sbjct: 381 DVYGRNPRLQQSGRHDKTFYRSLWRSITEHGHWQGEIENKRRNGEIYPAWQNINVVYDKN 440 Query: 342 AETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA 401 + ++ +DIS ++ + + L D +TGLPNR N L++ +++A Sbjct: 441 GNVANYVSVFSDISVI--------KEKEKQLRHLANHDSLTGLPNRLLFFNSLENSLERA 492 Query: 402 VS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVL 457 + I +D + + D++G+ D L V R E ++ + + R+ G +F + Sbjct: 493 RRRRMEVALMFIDLDRFKIINDTMGHEAGDILLKTVARRLLEAVRGEDMVARLGGDEFTI 552 Query: 458 -VSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHN 514 + ++ + A +L + +P+ I + SIGI+ N L A Sbjct: 553 SLEELSNTEDAAAKAGKLIETIRQPVHIGGHEIVCSASIGIAIFPHDADNAQNLARAADA 612 Query: 515 AMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYG 574 AM ++ N ++F++ + E E L L + +++A+ N+ +L YQPQ +G L G Sbjct: 613 AMYRAKELHRNTFEFYTSELTERAIEHLTLSSEMRQALERNEFELYYQPQFNLTSGRLVG 672 Query: 575 IEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSV 634 E L RW P G + P FI +AE+ I+ IG WVI + CR +A W + +P ++ Sbjct: 673 AETLLRWRHPTRGLITPYCFINIAEDSALIDPIGGWVINQLCRDVAGWLKGGLKLPRIAF 732 Query: 635 NLSALHFRSNQLPNQVSDAMHAWGIDGH--QLTVEITESMMMEHDTEIFKRIQILRDMGV 692 N+S+ + ++ A+ WG++ L +E+TE + +H+ + ++ +R +G+ Sbjct: 733 NVSSKQLEHYDVKGRIEHALQRWGLEPSDLDLELEVTEGAL-QHEERSVEVLRQVRLLGL 791 Query: 693 GLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVV 752 +++DDFGTG+S LSRL +P+ +KID+ F+ + AL I +G++L L VV Sbjct: 792 SVAIDDFGTGYSSLSRLKHMPIDTLKIDRMFIRDLPDDPNNQALASGIILLGRALGLKVV 851 Query: 753 AEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 AEGVE EQ L++ +C QG+ S+PLP + Sbjct: 852 AEGVENVEQLRFLQERNCDEAQGFLLSKPLPKAAFEKMLK 891 Score = 93.1 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 88/283 (31%), Gaps = 26/283 (9%) Query: 114 GKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCI 173 G V L + + A +E L A V D +R+ V + G + Sbjct: 69 GGVVAWVLTANEARNKALRESRNNLDKAQQIARLGNWVWDLKRNEVYWSDQVYRNLGLSL 128 Query: 174 SE--ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV 231 + AS + ++ + + + L E ++ GE+ + + + Sbjct: 129 HDNKASYEKFLECVHPDDRARIV-KLVDEALENKQVYGIEHRVIWPDGEERIVCGAGEVI 187 Query: 232 YDVLAHLQNLVMTFSDITEERQIR----QLEGNILAAMCSSPPFHEMGEI------ICRN 281 +DV + + T DITE ++ + I ++P + + I Sbjct: 188 FDVQGNPVQMHGTIQDITERKRDENRKNEYAHLIYDLYNNAPCGYHSLDPRGVIVDINET 247 Query: 282 IESVLNESHVSLFA--LRNGMPIHWASSSHGAEIQN------AQSWSATIRQRDGAPAGI 333 L S L + + ++ + IR +DG + Sbjct: 248 ALRWLGYSRSELVGKVMFCDLLSEDCVQLCWDKLGQLKKGGALSNLELNIRCKDGRLFCV 307 Query: 334 LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLI 376 L T+ +E F S+ + E+ + + ++Q Sbjct: 308 LLTSTALQSEDGEFRG-----SRCILVDYTERRRHEKELQQAA 345 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 838 bits (2166), Expect = 0.0, Method: Composition-based stats. Identities = 186/710 (26%), Positives = 307/710 (43%), Gaps = 43/710 (6%) Query: 114 GKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCI 173 G+ + L + +E + D I + N A GY + Sbjct: 330 GRGRAMRLASAMT--KELRENEEKFRAIADCTVNWEIWWGTDGKPRWINSAVEAYIGYTV 387 Query: 174 SEASGMQPDT--LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV 231 E + ++ + P Q+ L D EF + + G +W+ AS P+ Sbjct: 388 DECMALPDFAGTVIYPADIPR-VAPEFQKALQGLRGDDLEFRCVRKDGSLMWLSASWVPI 446 Query: 232 YDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMC--SSPPFHEMGEIICRNIESVLNES 289 D + DITE +Q+ A + I R + + Sbjct: 447 TDSKGEFIGFRTSGRDITERKQVEAELRIAAVAFDSMEPMMITDASATILRVNSAFTECT 506 Query: 290 HVSLFALRNGMPIHWASSSH--------GAEIQNAQSWSATI--RQRDGAPAG---ILQI 336 + + P S H EI +A W + R+++G + Sbjct: 507 GYTAEEIVGQTPRVLRSGRHDDAFFQEMWEEIHSAGGWQGEVWDRRKNGEVYPKWLTISA 566 Query: 337 KTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDD 396 S S ++ DI+ E++ + + I++L FD +T LPNR L + L Sbjct: 567 VMSDNGTVSHYVGTHHDIT--------ERKIAEERIKELAFFDALTRLPNRTLLLDRLRQ 618 Query: 397 LVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEG 452 + + + I +DH + + D+LG+ D L +V R + + + R+ G Sbjct: 619 AITASARNEACGALLFIDLDHFKTLNDTLGHDKGDLLLQQVARRLADSVLESDTVARVGG 678 Query: 453 TQFVLVSLEND------VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGK--N 504 +FV+V + + + + V+ P + + + SIG + G + Sbjct: 679 DEFVVVLGNLHKNRQEAANQTEAVGERILAVLGSPYHLGKIEYRTSASIGATVFRGHQAS 738 Query: 505 RDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQ 564 D LL A AM ++ G N +FF P M +V +R L A L+ AI +NQ L YQ Q Sbjct: 739 IDELLKQADLAMYKSKERGRNAVRFFDPDMQTVVVQRAALEAGLRNAIEDNQFLLHYQAQ 798 Query: 565 IFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRS 624 + + G EAL RW P G VPP+ FIPLAEE G I +G WV+ AC QLA W + Sbjct: 799 V--VGTRVTGAEALVRWQHPQRGIVPPAEFIPLAEETGLIVALGSWVLEAACAQLARWAA 856 Query: 625 QN-IHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKR 683 + + ++VN+S FR + V + G +L +E+TES+++++ +I ++ Sbjct: 857 RPDMAHLTIAVNVSVQQFRKADFVDNVLTIIGRTGARPDRLKLELTESVLVDNVQDIIEK 916 Query: 684 IQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSI 743 + L+ G+ ++DDFG G+S LS L LP+ ++KID+SFV L + + I ++ Sbjct: 917 MSALKAKGIVFALDDFGIGYSSLSYLKRLPLDQLKIDRSFVRDVLVDSNDAVIARTIVAL 976 Query: 744 GQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 +SL L V+AEGVET+ Q + L C QGY+F RPLP E+ +++ Sbjct: 977 ARSLGLGVIAEGVETEAQRDFLAAAGCYAYQGYYFCRPLPIEDFEALLNN 1026 Score = 175 bits (444), Expect = 7e-42, Method: Composition-based stats. Identities = 52/298 (17%), Positives = 101/298 (33%), Gaps = 11/298 (3%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNN--IDML 60 +T + F + + + + + + N A E GY +E + + Sbjct: 341 MTKELRENEEKFRAIADCTVNWEIWWGTDGKPRWINSAVEAYIGYTVDECMALPDFAGTV 400 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA--EGKVYY 118 I P + +G + E + +KDGS +W + ++ + + Sbjct: 401 IYPADIPRVAPEFQKALQGLRGD----DLEFRCVRKDGSLMWLSASWVPITDSKGEFIGF 456 Query: 119 LALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 RD + + + R +A D + P+++ D I++ N AFTE GY E G Sbjct: 457 RTSGRDITERKQVEAELRIAAVAFDSM-EPMMITDASATILRVNSAFTECTGYTAEEIVG 515 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 P +L + + + Q E + GE +IS V + Sbjct: 516 QTP-RVLRSGRHDDAFFQEMWEEIHSAGGWQGEVWDRRKNGEVYPKWLTISAVMSDNGTV 574 Query: 239 QNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFAL 296 + V T DITE + + LA + ++ R +++ + Sbjct: 575 SHYVGTHHDITERKIAEERI-KELAFFDALTRLPNRTLLLDRLRQAITASARNEACGA 631 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 47/359 (13%), Positives = 105/359 (29%), Gaps = 36/359 (10%) Query: 2 KLTDADN-AADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 +T+ A+ +M ++ + + ++ N A + GY EE++G +L Sbjct: 462 DITERKQVEAELRIAAVAFDSMEPMMITDASATILRVNSAFTECTGYTAEEIVGQTPRVL 521 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YY 118 H + G E+ +K+G +S V ++ +Y Sbjct: 522 RSGR----HDDAFFQEMWEEIHSAGGWQGEVWDRRKNGEVYPKWLTISAVMSDNGTVSHY 577 Query: 119 LALVRDASVEMAQKEQTRQL--IIAVDHLDRPVIVLDPERHIVQC---NRAFTEM----- 168 + D + +E+ ++L A+ L ++LD R + N A + Sbjct: 578 VGTHHDITERKIAEERIKELAFFDALTRLPNRTLLLDRLRQAITASARNEACGALLFIDL 637 Query: 169 ---------FGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTG 219 G+ + Q L +D R+ L + Sbjct: 638 DHFKTLNDTLGHDKGDLLLQQVARRLADSVLESDTVARV-----GGDEFVVVLGNLHKNR 692 Query: 220 EKI--WIKASISPVYDVLAHLQNLVMTFSDITEER---QIRQLEGNILAAMCSSPPFHEM 274 ++ +A + VL +L + R + +I + + Sbjct: 693 QEAANQTEAVGERILAVLGSPYHLGKIEYRTSASIGATVFRGHQASIDELLKQADLAMYK 752 Query: 275 GEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGI 333 + RN + ++ R + ++ + + GA A + Sbjct: 753 SKERGRNAVRFFDPDMQTVVVQRAALEAGLRNAIEDNQFLLHYQAQVVGTRVTGAEALV 811 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 837 bits (2164), Expect = 0.0, Method: Composition-based stats. Identities = 191/869 (21%), Positives = 349/869 (40%), Gaps = 98/869 (11%) Query: 6 ADNAADGIFFPALEQNMMGAV---LINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI- 61 + L + ++ ++++ + E+L GY +EEV+ L Sbjct: 270 SLKKTSLRLSDLLAASPTILYNLRVVGTTFQLVWVSENIERLLGYTQEEVMAEGWWNLHV 329 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS--AEGKVYYL 119 D R A + G+ ++ + +L ++G +W L V + + Sbjct: 330 HPDDREAALTHQSELLAVGQ-----LTYDYRLLHRNGQSVWIHDELRLVRSINGKPLEVV 384 Query: 120 ALVRDASVEMAQK----EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFT-EMFGYCIS 174 D S + L + V + PVI+ D + + N + Sbjct: 385 GAWLDVSEHKRTELIRQAHQSALNLIVANQPLPVILKDIAQRLESINPEMLVSIL----- 439 Query: 175 EASGMQPDTLLN--IPEFPADNRIRLQQLLWKTA-------RDQDE-FLLLTRTGEKIW- 223 L + P P D + QL + E ++ W Sbjct: 440 -LLDQHTGRLKHGEAPSLPDDYNAAIDQLKIGEGIGSCGTSAWRGEPVIVADIDHHPYWQ 498 Query: 224 --IKAS---------ISPVYDVLAHLQNLVMTFSD----------------------ITE 250 ++ + P + + + + Sbjct: 499 SYLELTRKANLHACWTIPFKNDAGKVLGTFAIYHRTPREPSQADLGLINEFALLTALAVQ 558 Query: 251 ERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESHVSLFA-----LRNG 299 + + A S+ + ++ I R + S + +++G Sbjct: 559 KVYAAESLKQAAAVFESTREGVVITDLQPRIVAINRAYAEITGYSEEQVLGKNPRIIKSG 618 Query: 300 MPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG---ILQIKTSSGAETSAFIERVADI 354 + A + A W + R+R G + + E ++ DI Sbjct: 619 RHDKLFYQAMWASLTKAGYWRGEVWNRRRSGDIYPQWLTISTVFNDRNEPCNYVGVFTDI 678 Query: 355 SQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIG 410 +Q ++S + L +D +TGLPNR + + L +++ + + Sbjct: 679 TQI--------KQSEARLAHLAHYDALTGLPNRLLVQSRLHHAIERTLRHGNQIAALYLD 730 Query: 411 VDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQ 469 +D ++V DSLG+ D+ L+ + R +++L+ + L R+ G +F++V + D + Sbjct: 731 LDRFKNVNDSLGHPIGDELLVMLALRLKKRLREEDTLARLGGDEFLVVLEDIKDSNEPAM 790 Query: 470 IADELRNVVSKPIMI-DDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNG 526 +A L ++++ P + + SIGIS + L+ A AM ++ G N Sbjct: 791 VAQTLIDLLATPFSLPSGHEIFINTSIGISLFPTDANSVTELIQHADMAMYLAKQEGRNT 850 Query: 527 WQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLH 586 +++ + A++ ERLVL L++A+S + L YQP I A G++ G+EAL RW P Sbjct: 851 YRYHTDALSIAANERLVLETQLRQALSAGEFVLHYQPLIDARKGQVMGVEALVRWQPPDK 910 Query: 587 GHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQL 646 V P +FIP+AEE G I +G WV+ AC Q W + ++VNLS F+S L Sbjct: 911 AMVSPGKFIPIAEETGLIVPLGEWVLRTACAQGRAWMDADFPPLVMAVNLSVRQFQSENL 970 Query: 647 PNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGL 706 + + + L +E+TESM MEH + + ++ L+ +GV LS+DDFGTG+S L Sbjct: 971 VELIRQVLEETKLPAACLELELTESMFMEHAEQSIEILKTLKSLGVRLSIDDFGTGYSSL 1030 Query: 707 SRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLR 766 + L P+ ++KID+SFV + + I ++ ++L L V+AEGVE+++Q ++L Sbjct: 1031 TYLKRFPIDKLKIDQSFVHGLAYDPNDREIAATIIAMARNLKLDVLAEGVESEQQLDILN 1090 Query: 767 KIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 + C QGY F RP+PA+E+ W Sbjct: 1091 QHGCDYYQGYLFHRPVPAQELEVWFRENK 1119 >UniRef50_C1DD31 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DD31_LARHH Length = 910 Score = 837 bits (2164), Expect = 0.0, Method: Composition-based stats. Identities = 211/812 (25%), Positives = 345/812 (42%), Gaps = 40/812 (4%) Query: 10 ADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAH 69 + F E G ++ ++ VM N + + G E V G ++ + P Sbjct: 100 NEDRFRYCFEHLPFGLLVFDQTGRVMVCNRHFDTMMGLSEEAVHGLDLTAM----PVPGF 155 Query: 70 PEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASV-- 127 +R G G ++ G + FA + + +A++ DA Sbjct: 156 SRAVRQALAGDVGHFFGEIPVAGGTRQLGVR--AVFAPLRTPSGQVPRGVAILEDALDNP 213 Query: 128 --EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 + R+ + +D I D + + NRA MFG+ EA G +L Sbjct: 214 RWQDELLAGRRRRQLFLDQSVLAAIEWDDGFCVQEWNRAAERMFGFSREEAIGQHAFFIL 273 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 +R LQ L+ + + TR G I + + + D + Sbjct: 274 PSEVRATLDREVLQSLMRQEGGWHSVNVNQTRDGALIQCEWFNTTLVDSNGKSLGVTSLV 333 Query: 246 SDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNI------ESVLNESHVSLFALRNG 299 DITE++ S + + R + + + + Sbjct: 334 LDITEKQAREDELRVAAQVYEQSREGILITDAQHRIVMLNSRCCELTGYTQGEVVGTTPE 393 Query: 300 MPIHWASSSHG------AEIQNAQSWSATI--RQRDGAPAGIL-QIKTSSGAETSAFIER 350 + S + W+ + RQR+G ++T ++ + Sbjct: 394 WMFSESQVSTPGFVELCRHLDEQGGWAGELLLRQRNGQLFLAWLTLRTVRLGTSTYHVCM 453 Query: 351 VADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD-----KAVSPV 405 D+S +++ + + I+ L FD +TGLPNR L + + + A + Sbjct: 454 FGDLS--------DRQAAERRIQYLAYFDTLTGLPNRALLTDRANMALRGVEGDAAPALA 505 Query: 406 VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVS 465 + L+ +DH + + D+LG++ DQ L V R + ++ + R G +FV++ + + S Sbjct: 506 LLLLDIDHFKHINDTLGHSTGDQLLQSVAKRLQATVREGDTVSRQGGDEFVVLLPDANAS 565 Query: 466 NITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNG 523 +A E+ + I + +++SIGI+ D G + L A AM ++ G Sbjct: 566 RAASVAQEILRRLGFVCRIGEHDISVSVSIGIAMAPDDGTDFATLSKCAEIAMYRAKQEG 625 Query: 524 GNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHD 583 N +FF P M E + L AL+ A+ +++L YQPQ+ +TGEL G+EAL RW Sbjct: 626 RNTLRFFFPEMQERTLRHVQLTGALRGAVERGEMQLHYQPQVDLQTGELSGVEALLRWTH 685 Query: 584 PLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRS 643 PL G V P FIPLAEE G I IG WV+ A RQLA+W + ++VNLS L F Sbjct: 686 PLFGAVSPGEFIPLAEESGLIIPIGDWVLRTAARQLADWLRDGLPPMVMAVNLSVLQFNL 745 Query: 644 NQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGF 703 L Q++ + G+ VE+TESM M I L +GV +S+DDFGTG+ Sbjct: 746 PGLAQQIASILSEAGVPPALFEVELTESMAMTEPEAAIATIDELHSVGVQVSLDDFGTGY 805 Query: 704 SGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFE 763 S L+ L + +KID SFV ++ A+++AI + +SL L VAEGVET Q E Sbjct: 806 SSLAYLKRFRLDRLKIDGSFVRDADSDPEDRAIVDAIVGMAESLGLATVAEGVETSGQLE 865 Query: 764 MLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 ++R + +QGY+ SRPLPA + W+ Sbjct: 866 VIRALGGDAVQGYWISRPLPAAGLVAWLEGWQ 897 Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 58/315 (18%), Positives = 118/315 (37%), Gaps = 10/315 (3%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 D A L+Q+++ A+ ++ V +N AAE+++G+ REE IG + ++P + Sbjct: 217 DELLAGRRRRQLFLDQSVLAAIEWDDGFCVQEWNRAAERMFGFSREEAIGQHAFFILPSE 276 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI---WTRFALSKVSAEGKVYYLAL 121 +R R + + G + +DG+ I W L S + +L Sbjct: 277 VRATLD---REVLQSLMRQEGGWHSVNVNQTRDGALIQCEWFNTTLV-DSNGKSLGVTSL 332 Query: 122 VRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 V D + + A++++ R + +++ D + IV N E+ GY E G P Sbjct: 333 VLDITEKQAREDELRVAAQVYEQSREGILITDAQHRIVMLNSRCCELTGYTQGEVVGTTP 392 Query: 182 DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNL 241 + + + + + L + L + E LL R G+ ++ V L Sbjct: 393 EWMFSESQVSTPGFVELCRHLDEQGGWAGELLLRQRNGQLFLAWLTLRTVR--LGTSTYH 450 Query: 242 VMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMP 301 V F D+++ + + LA + + R ++ + AL + Sbjct: 451 VCMFGDLSDRQAAERRI-QYLAYFDTLTGLPNRALLTDRANMALRGVEGDAAPALALLLL 509 Query: 302 IHWASSSHGAEIQNA 316 + ++ Sbjct: 510 DIDHFKHINDTLGHS 524 Score = 84.3 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 52/371 (14%), Positives = 100/371 (26%), Gaps = 54/371 (14%) Query: 23 MGAVLINENDEVMFFNPAAEKLW-GYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGK 81 G + + EV+ N AA +L G G +M + Sbjct: 11 NGVWWLAASGEVLHANDAAARLTRGCYDHPAFGQLANMHLSSGSERL------AWMLPQA 64 Query: 82 ARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIA 141 E DGS + + + + + D + Sbjct: 65 GGGEQTVWVQVDRLPDGSLMVHQLGTTSLDP-----VYCINED------------RFRYC 107 Query: 142 VDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQL 201 +HL ++V D ++ CNR F M G G+ + P +R Q L Sbjct: 108 FEHLPFGLLVFDQTGRVMVCNRHFDTMMGLSEEAVHGLDLTAM----PVPGFSRAVRQAL 163 Query: 202 LWKTARDQDEFLLLTRTGEK-IWIKASISPVYDVLAHLQNLVMTFSDITE---------- 250 E + G + + ++A +P+ + V D + Sbjct: 164 AGDVGHFFGEIPV--AGGTRQLGVRAVFAPLRTPSGQVPRGVAILEDALDNPRWQDELLA 221 Query: 251 -ERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALR------NGMPIH 303 R+ + + A + E R E + S + + Sbjct: 222 GRRRRQLFLDQSVLAAIEWDDGFCVQEW-NRAAERMFGFSREEAIGQHAFFILPSEVRAT 280 Query: 304 WASSSHGAEIQNAQSWSA--TIRQRDGAPA---GILQIKTSSGAETSAFIERVADISQHM 358 + ++ W + + RDGA S ++ V DI++ Sbjct: 281 LDREVLQSLMRQEGGWHSVNVNQTRDGALIQCEWFNTTLVDSNGKSLGVTSLVLDITEKQ 340 Query: 359 AALALEQEKSR 369 A + ++ Sbjct: 341 AREDELRVAAQ 351 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 836 bits (2162), Expect = 0.0, Method: Composition-based stats. Identities = 201/855 (23%), Positives = 357/855 (41%), Gaps = 82/855 (9%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 +A + + + +G V+ + +++ +N KL+G+ E IG + L Sbjct: 237 EALEKSSREMEALMANSSVGIVVT-HDRKIVRYNQRFGKLFGFPGENGIGMDTAGLY--R 293 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFAL-SKVSAEGKVYYLALVR 123 H E R + + EL + ++DGS IW + + + Sbjct: 294 SAEEHTELNRRAAPAL-FQAKPFQTELYMRRQDGSDIWVNLIGYVADPTDPSMGVFWIAE 352 Query: 124 DASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 D + +E+ ++ + D+ + + R QCNR F E++GY E +G Sbjct: 353 DRTAFKQAEEELKKAYFDQRLIFDNCVAGIAFV-RNRVFQQCNRRFEELYGYGPGELTGK 411 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 + A+ ++L + E + + G+ IW++ + + D Sbjct: 412 PTRVTYFSDKAHAEIGTTAYEMLGRGETFVSEVVHRRQNGDPIWMRITGRAI-DPANPND 470 Query: 240 NLVMTFSDITEERQIRQLEG----NILAAMCSSPPFHEMGEIICRNIE------------ 283 + + DIT + A + S+ + R I Sbjct: 471 GSIWNYEDITSRKVAEDSLRESVMLQRAILNSAKLMILSTDSEGRVISCNPATEQMLAYP 530 Query: 284 --SVLNESHVSLFALRNGMPIHWASSSHGAEIQ-----------------NAQSWSATIR 324 +L + V F LR + + S + W T + Sbjct: 531 SAELLGRTPVECFFLREEIQERRRALSSETGFDPASDIDVLLARVRLGSVDQGQW--TFQ 588 Query: 325 QRDGAPAGI---LQIKTSSGAETSAFIERVADISQH------------------------ 357 ++DG + + + F+ +DI++ Sbjct: 589 RKDGEKFIVELSISALHPEDKKAQGFLFVASDITERKRAEDALLRSRDELELRVKERTSE 648 Query: 358 MAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDH 413 + + LE+ + + L D +TGL NR L L + +D A + I +D Sbjct: 649 LESEVLERRRIESKLRYLAHHDALTGLANRTLLQQRLGEAMDNAAQDDTKVAILFIDLDR 708 Query: 414 IQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSN-ITQIAD 472 + + DSLG+ D L V +R E L+ + + R+ G +F+++ ++A Sbjct: 709 FKTINDSLGHHIGDTLLKNVASRLTETLRSNDTIARLGGDEFMIILPLKANEALAGKLAS 768 Query: 473 ELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFF 530 ++ + + PI ID +T SIGI + G + L+ A AM + NG N + +F Sbjct: 769 KILDALRPPIRIDGHELFVTPSIGICFYPNDGVTVNALMRNADTAMYQAKANGRNTYCYF 828 Query: 531 SPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVP 590 + MN + + L+ A+ N+ ++ YQP I +T + EAL RW P G V Sbjct: 829 TAEMNAAADNYFQIESDLRRAVDRNEFEVFYQPVIDLKTHRITSYEALVRWRHPTKGLVG 888 Query: 591 PSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQV 650 P++FI +AEE G I IG V+ +AC QL W + P L++NLS + F L + Sbjct: 889 PAQFITVAEESGLIGEIGTIVLRQACSQLRSWIDEGFTSPILALNLSPIQFNDPNLTEGI 948 Query: 651 SDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLV 710 + + + ++ +EITE+++M+ +Q L G LS+DDFGTG+S L+ L Sbjct: 949 CRILRDYDLTPDRIELEITETVIMQDGELALGTLQNLSSRGFRLSIDDFGTGYSSLAYLK 1008 Query: 711 SLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHC 770 PV +KID+SF+ + A++ AI ++ SL+L+V+AEGVETKEQ+++L ++C Sbjct: 1009 RFPVDTLKIDRSFITDMTANENDRAIVTAIMALANSLHLSVIAEGVETKEQYDLLSALNC 1068 Query: 771 RVIQGYFFSRPLPAE 785 QGY+ ++P+PAE Sbjct: 1069 NFAQGYYMAKPMPAE 1083 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 58/387 (14%), Positives = 132/387 (34%), Gaps = 42/387 (10%) Query: 18 LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNR 77 + +G + +N E++ +N +++G+ E+IG + L P D A E + Sbjct: 1 MNNAPVGILYT-KNGEILRYNAKFSEIFGFD-TEIIGKSARQLCPSD---AAYEALGEVA 55 Query: 78 EGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV-YYLALVRDASVEMAQKEQT- 135 + + +E+QL DG W + ++ D S + Sbjct: 56 GPILSAGKPFHQEIQLRHHDGHTFWADAVAYLFDPRHPAEGTIWIINDISERKQAERNLH 115 Query: 136 ---RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPA 192 ++L ++ ++ + R +++CNR F E+ GY E GM L E Sbjct: 116 ETVQELQSIFNNASVGIVFTNR-RTVLRCNRRFEEIVGYASDELHGMPTANLYASAESHE 174 Query: 193 DNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITE-- 250 + + LL + G IW + + D + +V +D+TE Sbjct: 175 ELGRQSSPLLSAGKAFSATKQFRRKDGHLIWCQVFAKAI-DPNDPSRGIVWIAADVTEAV 233 Query: 251 --ERQIRQLEGNILAAMCSSPPFHEMGE-----IICRNIESVLNESHVSLFALR------ 297 + + + A M +S + + + + + Sbjct: 234 STREALEKSSREMEALMANSSVGIVVTHDRKIVRYNQRFGKLFGFPGENGIGMDTAGLYR 293 Query: 298 NGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQIKTSSGAETSAFIERVADIS 355 + + + A+ + + R++DG+ + I ++ D S Sbjct: 294 SAEEHTELNRRAAPALFQAKPFQTELYMRRQDGSDIWVNLI---------GYVADPTDPS 344 Query: 356 QHMAALALEQ---EKSRQHIEQLIQFD 379 + +A ++ +++ + +++ FD Sbjct: 345 MGVFWIAEDRTAFKQAEEELKK-AYFD 370 Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 56/396 (14%), Positives = 117/396 (29%), Gaps = 38/396 (9%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + + +G V N V+ N E++ GY +E+ G L Sbjct: 109 QAERNLHETVQELQSIFNNASVGIVFTNR-RTVLRCNRRFEEIVGYASDELHGMPTANLY 167 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK-VYYLA 120 E + + + S Q +KDG IW + + + Sbjct: 168 AS---AESHEELGRQSSPLLSAGKAFSATKQFRRKDGHLIWCQVFAKAIDPNDPSRGIVW 224 Query: 121 LVRDASV----EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 + D + A ++ +R++ + + ++V +R IV+ N+ F ++FG+ Sbjct: 225 IAADVTEAVSTREALEKSSREMEALMANSSVGIVVTH-DRKIVRYNQRFGKLFGFPGENG 283 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 GM L E + R L++ Q E + + G IW+ V D Sbjct: 284 IGMDTAGLYRSAEEHTELNRRAAPALFQAKPFQTELYMRRQDGSDIWVNLIGY-VADPTD 342 Query: 237 HLQNLVMTFSDITEERQIRQLEGN--ILAAMCSSPPFHEMGEIICRN-------IESVLN 287 + D T +Q + + + + R E + Sbjct: 343 PSMGVFWIAEDRTAFKQAEEELKKAYFDQRLIFDNCVAGIAFVRNRVFQQCNRRFEELYG 402 Query: 288 ESHVSLFALRNGMPIHWASSSHG------AEIQNAQSWSATI--RQRDGAPAG--ILQIK 337 L + + + +++ + + R+++G P I Sbjct: 403 YGPGELTGKPTRVTYFSDKAHAEIGTTAYEMLGRGETFVSEVVHRRQNGDPIWMRITGRA 462 Query: 338 TSSGAETSAFIERVADISQHMAALALEQEKSRQHIE 373 I DI+ ++ + + Sbjct: 463 IDPANPNDGSIWNYEDITS--------RKVAEDSLR 490 Score = 88.5 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 19/154 (12%), Positives = 44/154 (28%), Gaps = 14/154 (9%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 D+ + + L + + + V+ NPA E++ Y E++G Sbjct: 486 EDSLRESVMLQRAILNSAKLMILSTDSEGRVISCNPATEQMLAYPSAELLGRTPVECFFL 545 Query: 64 DLRPAHPEYIRH------------NREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS 111 + ++KDG K ++S + Sbjct: 546 REEIQERRRALSSETGFDPASDIDVLLARVRLGSVDQGQWTFQRKDGEKFIVELSISALH 605 Query: 112 AEGK--VYYLALVRDASVEMAQKEQTRQLIIAVD 143 E K +L + D + ++ + ++ Sbjct: 606 PEDKKAQGFLFVASDITERKRAEDALLRSRDELE 639 >UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q21SZ9_RHOFD Length = 1169 Score = 836 bits (2161), Expect = 0.0, Method: Composition-based stats. Identities = 193/761 (25%), Positives = 323/761 (42%), Gaps = 44/761 (5%) Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDA 125 E + R E S EL+ +WT S + G Y+L +R + Sbjct: 419 ERYATENKQREINELTRRNEQQSAELRQRALQERWLWTVLGGSALVFAGSAYFLLRLRRS 478 Query: 126 SVEMAQ-----KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 + + + QL D + P+ VL + C + ++ + G Sbjct: 479 NRMLEALNTQVQRSQNQLQATFDAIPDPLFVLGLDGRYYDCRSSRADLLAAPAEDLIGKT 538 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 +L PE + L++ K +F L G W + S++ Sbjct: 539 VSDVL-PPEAASICLSALREANEKGTSTGKQFELQLAHGRA-WFELSVARKSVGQRQEPR 596 Query: 241 LVMTFSDITEERQIRQLEGNILAAMC--SSPPFHEMGEIICRNIESVLNESHVSLFALRN 298 ++ DITE +Q + A + + R + + S + Sbjct: 597 FIVLSRDITERKQAEEALRIAATAFESQEGMTVTDAQGAVLRINRAFTEITGYSADEVVG 656 Query: 299 GMPIHWASSSH--------GAEIQNAQSWSATI--RQRDGAPAGI---LQIKTSSGAETS 345 P S H I+ SW I R+++G + +G + Sbjct: 657 HNPRLLQSGRHDKAFYAAMWESIRRTGSWQGEIWNRRKNGEAYPELLSITAVKENGGIVT 716 Query: 346 AFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP- 404 ++ DI++ ++ + I L FD TGLPNR L + L + + Sbjct: 717 HYVGTFMDITR--------RKAAEDEIRNLAFFDLQTGLPNRRLLLDRLQQALAASARHR 768 Query: 405 ---VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE 461 + LI +D+ + + D+LG+ D L +V R + + R+ G +FV++ Sbjct: 769 RQGALLLIDLDNFKTLNDTLGHDKGDLLLQQVAQRLASCVHEGGTVARLGGDEFVVMLEN 828 Query: 462 NDVS------NITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDL--GKNRDYLLSTAH 513 +A + + + +D + T SIGI+ + + LL A Sbjct: 829 LSEHLEAAATQAETLAKRILASLKQTYSLDGYEYQSTASIGITLFSEQQETTEDLLKRAD 888 Query: 514 NAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELY 573 AM + G N +FF P M +V R L A L+ A+++++ L YQ Q+ + G L Sbjct: 889 LAMYQAKAVGRNTLRFFDPEMQAVVTSRAALEAGLRRAVTSDEFLLYYQAQVDGQ-GHLT 947 Query: 574 GIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN-IHIPAL 632 G EAL RW P G V P FI LAE+ G I +GRWV+ AC QLA+W ++ + + Sbjct: 948 GCEALLRWQHPERGLVAPGEFIALAEDTGLILPLGRWVLDAACTQLAQWATRPEMAHLTV 1007 Query: 633 SVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGV 692 +VN+S F NQV + + G + +L +E+TES+++ ++ ++ IL++ GV Sbjct: 1008 AVNVSVRQFHQADFVNQVLTVLDSTGTNPQRLKLELTESLLIGDVEDVIAKMSILKEKGV 1067 Query: 693 GLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVV 752 G S+DDFGTG+S LS L LP+ ++KID+ FV L + A+ + ++G SL L V+ Sbjct: 1068 GFSLDDFGTGYSSLSYLKRLPLDQLKIDQGFVRNILIDPNDAAIARMVIALGDSLGLAVI 1127 Query: 753 AEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 AEGVE + Q + L ++ C QGY F RPLP ++ ++ Sbjct: 1128 AEGVEIEAQRDFLARLGCHACQGYLFCRPLPLDQFEAFVRR 1168 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 94/265 (35%), Gaps = 13/265 (4%) Query: 2 KLTDAD----NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNI 57 ++ +A + + ++ + + L E++IG + Sbjct: 480 RMLEALNTQVQRSQNQLQATFDAIPDPLFVLGLDGRYYDCRSSRADLLAAPAEDLIGKTV 539 Query: 58 DMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK-- 115 ++P + +R E G + + +L + W ++++ S + Sbjct: 540 SDVLPPEAASICLSALREANEKGTSTGKQFELQLAHGRA-----WFELSVARKSVGQRQE 594 Query: 116 VYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 ++ L RD + +E R A + + V D + +++ NRAFTE+ GY E Sbjct: 595 PRFIVLSRDITERKQAEEALRIAATAFE-SQEGMTVTDAQGAVLRINRAFTEITGYSADE 653 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL 235 G P LL + + + +T Q E + GE SI+ V + Sbjct: 654 VVGHNP-RLLQSGRHDKAFYAAMWESIRRTGSWQGEIWNRRKNGEAYPELLSITAVKENG 712 Query: 236 AHLQNLVMTFSDITEERQIRQLEGN 260 + + V TF DIT + N Sbjct: 713 GIVTHYVGTFMDITRRKAAEDEIRN 737 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 61/168 (36%), Gaps = 9/168 (5%) Query: 2 KLTDADNAADG-IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 +T+ A + ++ G + + V+ N A ++ GY +EV+G+N +L Sbjct: 603 DITERKQAEEALRIAATAFESQEGMTVTDAQGAVLRINRAFTEITGYSADEVVGHNPRLL 662 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YY 118 H + R E+ +K+G +++ V G + +Y Sbjct: 663 QSGR----HDKAFYAAMWESIRRTGSWQGEIWNRRKNGEAYPELLSITAVKENGGIVTHY 718 Query: 119 LALVRDASVEMAQKEQTRQL--IIAVDHLDRPVIVLDPERHIVQCNRA 164 + D + A +++ R L L ++LD + + + Sbjct: 719 VGTFMDITRRKAAEDEIRNLAFFDLQTGLPNRRLLLDRLQQALAASAR 766 >UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q478F7_DECAR Length = 739 Score = 835 bits (2157), Expect = 0.0, Method: Composition-based stats. Identities = 191/705 (27%), Positives = 311/705 (44%), Gaps = 53/705 (7%) Query: 136 RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN--------- 186 + +H R +I+ +P+ I NRA +M GY E G + L + Sbjct: 29 DLQLSIFEHAGRAIILTNPDGLISYFNRAAQQMLGYTPEEVVGRETPLLFHLADEISACA 88 Query: 187 ------IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 P L RD+ ++ + + G + + ++S + D +Q Sbjct: 89 RLYSCEPDGTPPAGFGVFISRLKLKIRDEADWTYVRKDGSHLPVSLAVSVLRDAKGGVQG 148 Query: 241 LVMTFSDITEERQIRQLEGNILAAMC--SSPPFHEMGEIICRNIESVLNESHVSLFALRN 298 + SDI+E R++ A ++ ++ + I R ++ + S Sbjct: 149 YLGIASDISERRRMEHDLRIAAIAFESQAAIMVTDVNQRILRVNQAFTKLTGYSAEEAIG 208 Query: 299 GMPIHWASSS--------HGAEIQNAQSWSATI--RQRDGAPAGILQI---KTSSGAETS 345 P S + W I R+++G + + Sbjct: 209 QTPGMLKSGRQDADFYAAMWCSLGQCGHWQGEIWNRRKNGEIFPEWLTISGVRDGRGKVT 268 Query: 346 AFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS-- 403 ++ +DIS + + I L +DP+T +PNR L N LD A Sbjct: 269 HYVSTFSDISN--------LKVAESEIHHLAFYDPLTAMPNRRLLLNRLDQACVSAKRSG 320 Query: 404 --PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE 461 + +I +DH + + D+LG+ D L+EV R ++ R G +FV++ E Sbjct: 321 QFGALLIIDIDHFKTLNDTLGHDVGDHLLVEVARRLSACIREGDTAARQGGDEFVVMLEE 380 Query: 462 NDVSN------ITQIADELRNVVSKPIMIDD-KPFPLTLSIGISYDLGK--NRDYLLSTA 512 +A+++R +++P +++ + + SIGIS G+ D LL A Sbjct: 381 LGSEQEGAAVQAEIVAEKIRLELARPYLLNGDTEYFRSASIGISLFFGQEKTIDILLKQA 440 Query: 513 HNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGEL 572 A+ + G N +FF AM + ER L A L+ A+ ++ L QPQ+ A L Sbjct: 441 DIALYKAKDAGRNAIRFFDTAMQTTLDERAELEAGLRRALVRDEFVLYVQPQVDAV-RRL 499 Query: 573 YGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNI-HIPA 631 G EAL RW P V P+ FIPLAEE G I IG WV+ +AC +L W Sbjct: 500 IGAEALLRWQPPGRAMVAPNDFIPLAEETGLIVPIGIWVLDQACAELRRWADDPRSASLF 559 Query: 632 LSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMG 691 LSVN+SA FR QV+DA+ G + L +E+TES+++++ E+ +++Q LR +G Sbjct: 560 LSVNVSARQFRQADFVAQVADALARHGANPRLLKLELTESLLLDNVEEVIEKMQALRTIG 619 Query: 692 VGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTV 751 V S+DDFGTG++ LS L P ++K+D+SF+ A++ AI ++G +L L+V Sbjct: 620 VRFSLDDFGTGYASLSYLKRFPFEQLKVDRSFIRDININPDDAAIVRAIIAMGNTLRLSV 679 Query: 752 VAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLP 796 VAEGVE Q L K C + QGY F RP+ ++ + S P Sbjct: 680 VAEGVEDDLQHAYLVKHECSLFQGYLFGRPMSFDDFRASLGSEPP 724 Score = 188 bits (479), Expect = 6e-46, Method: Composition-based stats. Identities = 60/260 (23%), Positives = 96/260 (36%), Gaps = 16/260 (6%) Query: 15 FPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIR 74 E +L N + + +FN AA+++ GY EEV+G +L + + Sbjct: 32 LSIFEHAGRAIILTNPDGLISYFNRAAQQMLGYTPEEVVGRETPLLFHLADEISACARLY 91 Query: 75 HNREGGKARVEGM------------SRELQLEKKDGSKIWTRFALSKVSA--EGKVYYLA 120 G + +KDGS + A+S + G YL Sbjct: 92 SCEPDGTPPAGFGVFISRLKLKIRDEADWTYVRKDGSHLPVSLAVSVLRDAKGGVQGYLG 151 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 + D S + R IA + ++V D + I++ N+AFT++ GY EA G Sbjct: 152 IASDISERRRMEHDLRIAAIAFE-SQAAIMVTDVNQRILRVNQAFTKLTGYSAEEAIGQT 210 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 P L AD + L + Q E + GE +IS V D + + Sbjct: 211 PGML-KSGRQDADFYAAMWCSLGQCGHWQGEIWNRRKNGEIFPEWLTISGVRDGRGKVTH 269 Query: 241 LVMTFSDITEERQIRQLEGN 260 V TFSDI+ + + Sbjct: 270 YVSTFSDISNLKVAESEIHH 289 Score = 101 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 48/155 (30%), Gaps = 8/155 (5%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 D ++ ++ + N ++ N A KL GY EE IG ML Sbjct: 158 ERRRMEHDLRIAAIAFESQAAIMVTDVNQRILRVNQAFTKLTGYSAEEAIGQTPGMLKSG 217 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYLAL 121 + + + E+ +K+G W + + +Y++ Sbjct: 218 RQDADFYAAMWCSL----GQCGHWQGEIWNRRKNGEIFPEWLTISGVRDGRGKVTHYVST 273 Query: 122 VRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDP 154 D S + + L + + ++L+ Sbjct: 274 FSDISNLKVAESEIHHLAFYDPLTAMPNRRLLLNR 308 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 835 bits (2157), Expect = 0.0, Method: Composition-based stats. Identities = 189/832 (22%), Positives = 335/832 (40%), Gaps = 63/832 (7%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 ++ A+ MG +N D+ + + + G + ++ L+ Sbjct: 180 RLQHSENRLHIAMRTAQMGNWSLNLADDSLTLSSEFPAILGTSA--AMPQTLEELL-LHY 236 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLALVR 123 +RH + E Q+ + W R V ++ Sbjct: 237 AAESRGRLRHVISECARKGTPFDEEAQMLTAQDGRRWVRIIGEVVRDGQGAITRIQGALQ 296 Query: 124 DASVEMAQKEQT----RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 D + +E+T +L + + + LD E N+ + +E G Sbjct: 297 DINARKQAQEETLRLAMRLTTTLASITEAFVTLDREGRFTYLNQESERLLQRSTAELLGQ 356 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 + E R +Q+ L + + E+ G+ W++ P + Sbjct: 357 EIWQDF-GEEVSGRLRQHIQRALATNRQVEFEYFD-APLGK--WLEVRAYPF------AE 406 Query: 240 NLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE------------IICRNIESVLN 287 L + F D++E R ++ + + + E + E Sbjct: 407 GLAVYFRDVSERRNSQEQLMLLETGIARLNDIVVIVEASPHHGSGPQIVFVNDAFERHTG 466 Query: 288 ESHVSLFALRNGMPIHWASSSHGAE--IQNAQSW---SAT--IRQRDGAPAGI---LQIK 337 + + + GM + Q W I ++DG + + Sbjct: 467 YTRDEVLSRMPGMLQGPGTRQDELARIFSALQQWKQARGELVIYRKDGGSFWVDLEIVSV 526 Query: 338 TSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDL 397 + + + ++ DI+Q ++ + + I L +DP+T LPNR L + L+ Sbjct: 527 AAQNGDLTHWVAVGRDITQ--------RKAADEKIHHLAFYDPLTELPNRQLLLDRLEQA 578 Query: 398 VDKA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGT 453 + V+ I +D+ + + D++G++ D L +V R + ++ + R+ G Sbjct: 579 LADCTITRQEGVLMFIDLDNFKILNDTVGHSKGDLLLQKVAVRLKGCVRKLDTVARLGGD 638 Query: 454 QFVLVS------LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGK--NR 505 +FV++ E +A+++ + +P + T SIG++ + + Sbjct: 639 EFVVMLQDLGTQPEAATRKAQIVAEKVLATLREPYDLAGYQHYSTSSIGVTPFNARQGSV 698 Query: 506 DYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQI 565 LL A AM + G N FF P M V L L+ + +Q + YQPQ+ Sbjct: 699 SELLKQADLAMYQAKTMGRNTVCFFDPDMQASVSANAALSTDLRAGLREHQFLVHYQPQV 758 Query: 566 FAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ 625 + G+EAL RW P G V P+ FIP+AEE G I +G+WV+ +AC QLA W+ + Sbjct: 759 D-REQRITGVEALLRWKHPQRGMVSPAEFIPVAEETGLILPLGQWVLEQACLQLAVWQKR 817 Query: 626 N-IHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRI 684 +++VN+S FR + V A+ GI H L +E+TES++ + ++ Sbjct: 818 PETAGLSIAVNVSVRQFRHPDFVDMVMAAIKHTGIQPHNLKLELTESLLADRMEIAIAKM 877 Query: 685 QILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIG 744 L+ +GV L++DDFG G+S LS L LP+ ++KIDKSF+ ++ A+ AI S+ Sbjct: 878 GTLKALGVTLALDDFGMGYSSLSYLKRLPLDQLKIDKSFIADVFSDPNDAAICSAIISLA 937 Query: 745 QSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLP 796 QSL L V+AEGVET+ Q L + C QG+ F PLP E +M P Sbjct: 938 QSLGLDVIAEGVETEAQRSFLAGLGCGYYQGFLFCPPLPIAEFEAFMQGAAP 989 >UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n=2 Tax=Proteobacteria RepID=Q2W1Z2_MAGSA Length = 1510 Score = 834 bits (2156), Expect = 0.0, Method: Composition-based stats. Identities = 204/816 (25%), Positives = 350/816 (42%), Gaps = 49/816 (6%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 F ++ + + N AA + + G +I L PA + I Sbjct: 712 FEGVYNTIDFPIMVFDPELFLKRANGAAVRTYDLPLS-ASGMHIGRLK----LPAFLDNI 766 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKE 133 + S ++ K+ S + +V D + + +E Sbjct: 767 DKSLTAALTEQRKESFQITFGKR---TFQVFVTPSMSMTGTPQSVVLVVVDHTDLVEAQE 823 Query: 134 QTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE 189 Q R +L+ ++H V + D N F E+FG E G L + Sbjct: 824 QIRESQERLLSIMNHSTSAVSLKDAAGRYEFINMRFEELFGLSAEEVIGKTDQQLF-SRD 882 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 R R +++ + + Q ++ T K+W+ + P++D ++ + +D+T Sbjct: 883 IAQLLRSRDLEVMGQLSAIQHLEEMVFPT-SKVWLDSVRFPIFDSNGVVRAVCSQSTDVT 941 Query: 250 EERQIRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNESHVSLFA-----LRN 298 + + + + + + + + SH + L++ Sbjct: 942 MKHHAEEQLRLAAKVFDRAGEAITITDSSGNIITVNDSFCRITGYSHQEVIGKNPRFLQS 1001 Query: 299 GMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQIK---TSSGAETSAFIERVAD 353 G + + W I R+++G ++ +D Sbjct: 1002 GKHGKDFYDAMWRSLIEQGCWQGEIFNRRKNGEIYPEWLTVNSVRDENGSVVNYVAIFSD 1061 Query: 354 ISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLI 409 IS + S++ IE L D +TG+PNR+ L + L V +A V I Sbjct: 1062 ISAI--------KSSQRRIEFLATHDELTGIPNRSLLMDRLKHAVAQAKRQKTKLAVLFI 1113 Query: 410 GVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQ 469 +D+ + + DSLG+ DQ L + R + ++ L R+ G +FV V + + + Sbjct: 1114 DLDNFKVINDSLGHDVGDQLLKQATERLKHCVRDSDTLARLGGDEFVAVLTDVSLEKVNS 1173 Query: 470 IADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGW 527 +A + + + I+DK ++ SIGIS G++ LL A AM ++ G N + Sbjct: 1174 VAARIVDFLGASFSINDKSLFVSASIGISVFPDDGQDSLTLLKHADTAMYRAKERGRNQY 1233 Query: 528 QFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHG 587 QFF+ M + +RL L L+ A+ ++ YQPQ+ TGE+ G EAL RW DP G Sbjct: 1234 QFFADEMKVIALQRLTLETGLRLALETKSFRMCYQPQVDIHTGEVVGAEALLRWRDPTLG 1293 Query: 588 HVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLP 647 V P+ FIP+AE G I IG V Q+A WR + + +P +++N+SA R Sbjct: 1294 EVSPAHFIPIAESCGLIGAIGETVFTMVLEQIAYWREKGLTVPRIAINVSAHQLRDAGFA 1353 Query: 648 NQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLS 707 +V + + GI + +E+TES +ME + + + MG+ +S+DDFGTG+S LS Sbjct: 1354 AKVGSWLDSSGISSELIGIELTESALMERIDMVKEMLTSFDGMGMKVSIDDFGTGYSSLS 1413 Query: 708 RLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRK 767 L LP+ E+KID+SFVD E+ ++ +AI + ++L + VVAEGVE++EQ +L++ Sbjct: 1414 YLKKLPIHELKIDRSFVDGIALERDDRSIAKAIIDMSRALGMRVVAEGVESEEQLGVLKE 1473 Query: 768 IHCRVIQGYFFSRPLPAEEIPGWMS-----SVLPLK 798 C ++QGY F RPL E + S PLK Sbjct: 1474 EGCDMVQGYLFHRPLSPEAFAKVIETGGKSSRKPLK 1509 Score = 180 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 87/260 (33%), Gaps = 8/260 (3%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 ++ + + + + L + F N E+L+G EEVIG L Sbjct: 819 VEAQEQIRESQERLLSIMNHSTSAVSLKDAAGRYEFINMRFEELFGLSAEEVIGKTDQQL 878 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA 120 RD+ G+ E+ SK+W + V Sbjct: 879 FSRDIAQLLRSRDLEVM--GQLSAIQHLEEMVFPT---SKVWLDSVRFPIFDSNGVVRAV 933 Query: 121 LVR--DASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 + D +++ +EQ R D + + D +I+ N +F + GY E G Sbjct: 934 CSQSTDVTMKHHAEEQLRLAAKVFDRAGEAITITDSSGNIITVNDSFCRITGYSHQEVIG 993 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 P L + D + + L + Q E + GE +++ V D + Sbjct: 994 KNP-RFLQSGKHGKDFYDAMWRSLIEQGCWQGEIFNRRKNGEIYPEWLTVNSVRDENGSV 1052 Query: 239 QNLVMTFSDITEERQIRQLE 258 N V FSDI+ + ++ Sbjct: 1053 VNYVAIFSDISAIKSSQRRI 1072 Score = 46.9 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 45/347 (12%), Positives = 99/347 (28%), Gaps = 42/347 (12%) Query: 55 NNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMS-----RELQLEKKDGSKIWTRFALSK 109 + + P D + E+++ E A E M + E+ S + + Sbjct: 624 QDGAEVFPDDELASTREHLQTLMEEMAASNEEMQALNEEVQASNEELQASNEELEASNEE 683 Query: 110 VSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMF 169 + A + + +D P++V DPE + + N A + Sbjct: 684 LQATNEELVSVNEESLIKSAELAAINSDFEGVYNTIDFPIMVFDPELFLKRANGAAVRTY 743 Query: 170 GYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASIS 229 +S ASGM L + L L + ++ + K + ++ Sbjct: 744 DLPLS-ASGMHIGRLKLPAFLD-NIDKSLTAALTEQRKESFQITF-----GKRTFQVFVT 796 Query: 230 PVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSP----------PFHEMGEIIC 279 P + Q++V+ D T+ + ++ + S E I Sbjct: 797 PSMSMTGTPQSVVLVVVDHTDLVEAQEQIRESQERLLSIMNHSTSAVSLKDAAGRYEFIN 856 Query: 280 RNIESVLNESHVSLFALRNGMP--IHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQI- 336 E + S + + A +++ SA I+ + ++ Sbjct: 857 MRFEELFGLSAEEVIGKTDQQLFSRDIAQLLRSRDLEVMGQLSA-IQHLEEMVFPTSKVW 915 Query: 337 -------KTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLI 376 S A + D++ + + + + L Sbjct: 916 LDSVRFPIFDSNGVVRAVCSQSTDVTM--------KHHAEEQLR-LA 953 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 834 bits (2155), Expect = 0.0, Method: Composition-based stats. Identities = 206/705 (29%), Positives = 330/705 (46%), Gaps = 42/705 (5%) Query: 116 VYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPER-HIVQCNRAFTEMFGYCIS 174 V + + E KE +L VD + ++V+DPE IV N G Sbjct: 262 VRAASELERRQAERVLKETEARLKTIVDSVHTGILVIDPENHRIVDVNELAASSLGRTRE 321 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 E G + E LQQ L RD L+ G ++ + ++S V Sbjct: 322 EMIGTSCHRFICPNEEGRCPITDLQQELDNEERD-----LIRADGSRLPVIKTVSRVVLD 376 Query: 235 LAHLQNLVMTFSDITEERQIR----QLEGNILAAMCSSPPFHEMGEIIC------RNIES 284 ++L+ +F DI+ +Q+ + E + + ++ + Sbjct: 377 --GREHLLESFVDISRRKQVENSLKESEERYRMLVENQADLVIKTDMTGNLLFVSPSFCK 434 Query: 285 VLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATIR--QRDGAPA--GILQ 335 + ++ L + ++ I + S+ R+G L+ Sbjct: 435 LFGQTEEKLLGKALLPVIMLPEQLATAAGMEQMICSDTSYYREYLSPTREGKRWIGWALR 494 Query: 336 IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLD 395 + + A I DI+ +++ + IEQL DP+TGLPNR LH+ L Sbjct: 495 CIFNQSGQAEAIIGMGRDIT--------DRKTAESTIEQLAYHDPVTGLPNRTLLHDRLQ 546 Query: 396 DLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIE 451 +++A + + +D + + DSLG+A DQ L V NR + ++ + R+ Sbjct: 547 LAINRAERDSQGVAILFLDLDRFKAINDSLGHAMGDQLLRLVGNRLLDCVRSSDTVARLG 606 Query: 452 GTQFVLVSLENDVSNI-TQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYL 508 G +FV++ D + + ++ + +P IDD + SIGIS G++ + L Sbjct: 607 GDEFVVLISALDNDHAVGSVVMKILEQLCEPYQIDDHEVYTSSSIGISLFPRDGRDAEEL 666 Query: 509 LSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAE 568 L A AM ++ G N FFSP +N ERL+L + ++ A+ + LVYQPQ+ Sbjct: 667 LKNADMAMYQAKEAGRNTCHFFSPELNMRATERLLLESTMRRALEREEFFLVYQPQMELR 726 Query: 569 TGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIH 628 +G + GIEAL RW P G VPP+ FIP+AEE G I +G WV+AEACRQ W+ + Sbjct: 727 SGHIAGIEALLRWRHPDLGVVPPNNFIPIAEETGLIVPLGEWVLAEACRQAVRWQQEGQP 786 Query: 629 IPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILR 688 ++VN+SA FR L ++ + G+D L +E+TES +ME+ E ++ L+ Sbjct: 787 PLRMAVNVSARQFRQRNLGLRIEKILMETGLDPALLELELTESAVMENPEEAILTLRQLK 846 Query: 689 DMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLN 748 MG+ LS+DDFGTG+S LS L P+ +KID+SFV + + EAI ++ S+ Sbjct: 847 KMGITLSIDDFGTGYSSLSHLKHFPIDRLKIDRSFVKHVTRDHNDATIAEAIIALAHSMK 906 Query: 749 LTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 LTVVAEG+E EQ E + + HC +QGY+ SRP+ AEE ++ Sbjct: 907 LTVVAEGIEHSEQMEFMHQRHCDTMQGYYLSRPVTAEEFGTFLKR 951 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 102/265 (38%), Gaps = 17/265 (6%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINEND-EVMFFNPAAEKLWGYKREEVIGNNIDML 60 + + ++ G ++I+ + ++ N A G REE+IG + Sbjct: 272 QAERVLKETEARLKTIVDSVHTGILVIDPENHRIVDVNELAASSLGRTREEMIGTSCHRF 331 Query: 61 I-PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL 119 I P + ++ + + E L + DGS++ +S+V +G+ + L Sbjct: 332 ICPNEEGRCPITDLQQELD---------NEERDLIRADGSRLPVIKTVSRVVLDGREHLL 382 Query: 120 ALVRDASVEMAQK----EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 D S + E + + V++ VI D +++ + +F ++FG + Sbjct: 383 ESFVDISRRKQVENSLKESEERYRMLVENQADLVIKTDMTGNLLFVSPSFCKLFGQTEEK 442 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL 235 G ++ +PE ++Q++ E+L TR G+ WI ++ +++ Sbjct: 443 LLGKALLPVIMLPE-QLATAAGMEQMICSDTSYYREYLSPTREGK-RWIGWALRCIFNQS 500 Query: 236 AHLQNLVMTFSDITEERQIRQLEGN 260 + ++ DIT+ + Sbjct: 501 GQAEAIIGMGRDITDRKTAESTIEQ 525 Score = 79.6 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 62/167 (37%), Gaps = 11/167 (6%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 ++ ++ ++ + +E + + ++F +P+ KL+G E+++G + +I Sbjct: 393 QVENSLKESEERYRMLVENQADLVIKTDMTGNLLFVSPSFCKLFGQTEEKLLGKALLPVI 452 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYL 119 + A + + RE ++G W +AL + + + Sbjct: 453 MLPEQLATAAGMEQMICSDTS----YYREYLSPTREGK-RWIGWALRCIFNQSGQAEAII 507 Query: 120 ALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIVQCNRA 164 + RD + + QL V L ++ D + + NRA Sbjct: 508 GMGRDITDRKTAESTIEQLAYHDPVTGLPNRTLLHDRLQ--LAINRA 552 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 833 bits (2152), Expect = 0.0, Method: Composition-based stats. Identities = 205/832 (24%), Positives = 351/832 (42%), Gaps = 68/832 (8%) Query: 1 MKLTDA-DNAADGIFFPALEQNMMGAVL--INENDE-VMFFNPAAEKLWGYKREEVIGNN 56 ++ A AA AL + + + ++ + + + +L GY + Sbjct: 263 LERERANLRAASERLALALATSPVILYSRRLGPDERPLTWISENIARLLGYSPTLALQPG 322 Query: 57 IDML-IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK 115 + + R A +++R GG +L G W + ++ + +G Sbjct: 323 WWNSRLHPEDREAALDWLRELDRGGAMVHA-----YRLIDAQGRVRWIQDEVTLLETDGG 377 Query: 116 V--YYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCI 173 D + ++ + +D L + D I I Sbjct: 378 TTHEATGAWHDITATKTGEQMRETRLAVLDALIDKHSLTDILGEIATRLERMEPDMRVSI 437 Query: 174 SEASGM---QPDTLLNIPEFPADNRIRLQ----QLLWKTARDQDEFLLLTRTGEKIWIKA 226 G +PE PAD + Q+L + E T T + Sbjct: 438 Q--IGSDGPHLPAERTVPERPADWVAPFKDGAGQMLGRLFVHYVEPRAPTPTERE----- 490 Query: 227 SISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICR 280 + D A + L +T + S+ + ++ + R Sbjct: 491 ----LIDECACIAGLAVT------RVRADTRLRQAATVFESTREGVIITDLEGRILDVNR 540 Query: 281 NIESVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGI 333 + S + LR+ H + ++ W I R++ G Sbjct: 541 AFTEISGYSEPEVLGRNPSLLRSNRQDHAFYQAMWHSLKTTGHWQGEIWNRRKSGELYPQ 600 Query: 334 LQIKT---SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNL 390 + S S ++ + DISQ ++S +E L+ +DP+T LPNR + Sbjct: 601 ILTINTVADSQGRPSHYVGVMTDISQ--------LKQSEARLEHLVHYDPLTNLPNRRLV 652 Query: 391 HNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQY 446 + L+ +++A V + +D + V DSLG+ D L + R E+++ D Sbjct: 653 QSRLEHALERADRQGGRVAVLFVDLDRFKTVNDSLGHPSGDVLLELLARRLSERVREDDT 712 Query: 447 LCRIEGTQFVLVSLEND-VSNITQIADELRNVVSKPIMI-DDKPFPLTLSIGISY--DLG 502 L R+ G +F+++ + +A+ L +++ +P + + + + SIGIS D G Sbjct: 713 LARLGGDEFLVLLENLQRPEDAAAVAESLLSLLQQPFHLPNGQELYVGASIGISLYPDDG 772 Query: 503 KNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQ 562 L+ A AM ++ G N ++F++P++ + +ERL L A L A+++ + L YQ Sbjct: 773 HTVTDLIQHADVAMYQAKEEGRNTYRFYTPSLTQTARERLGLEARLHRALASEEFVLHYQ 832 Query: 563 PQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEW 622 QI G L G EAL RWH G V P RFIPLAEE G I +G WV+ +AC W Sbjct: 833 AQIDMRDGRLIGCEALVRWHSATEGLVAPDRFIPLAEETGLIVPLGEWVLRQACADCQSW 892 Query: 623 RSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFK 682 R++ + ++VNLS RS L +V+ + G+ +L +E+TESM+M+ + + Sbjct: 893 RARGLTDLTVAVNLSGRQLRSPDLVERVTRVLRETGLPAERLKLELTESMIMDQREQALE 952 Query: 683 RIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITS 742 R++ L+ +GV LS+DDFGTG+S L+ L LP+ E+KID+ FV + + + I + Sbjct: 953 RLRALKALGVRLSIDDFGTGYSSLAYLKRLPIDELKIDRDFVRDIPEDSSDMEIAATIIA 1012 Query: 743 IGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 + ++L L V+AEGVET EQ + L + C QGY F RPLPAE M + Sbjct: 1013 MARNLRLNVIAEGVETPEQCDFLIRQGCTAGQGYLFGRPLPAEAFAQVMRAC 1064 >UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KEH4_CYAP7 Length = 1027 Score = 831 bits (2147), Expect = 0.0, Method: Composition-based stats. Identities = 204/824 (24%), Positives = 375/824 (45%), Gaps = 71/824 (8%) Query: 2 KLTDADNAAD------GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGN 55 +T+ NA + + IN+ ++ + ++L EEVIG Sbjct: 235 DMTEQKNAEEVTTHINQEIQALFDAFPDILFRINDQGIILDYKLQEQQLLSTAPEEVIGK 294 Query: 56 NIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK 115 +I + P + E I+ + +S E L +D + + +++ + Sbjct: 295 SIQEVFPEPIGNQLYEGIQQVLLT----RQPLSLEYSLNIEDKKRFFE----ARIVQLNQ 346 Query: 116 VYYLALVRDASVEM----AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY 171 +A++RD S A +E +L + +++LD E ++ N A +FG Sbjct: 347 TEIIAVIRDISARKHTELALRESEERLSTIISTNPNGLLILDREGKVLFVNPAAEILFGR 406 Query: 172 CISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV 231 + G +L +P + E +L TG+ + A I V Sbjct: 407 PKKDLMGQ----ILGLPIIVNNY---------------SEIEILQPTGKM--VIARIRQV 445 Query: 232 YDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE------IICRNIESV 285 + + + + D+T+ + ++ + A SP + + + R E + Sbjct: 446 KILWEEKEAFLASLVDVTDLKGAQKQLKILKQATEQSPVSVIITDAEGHIEYVNRKFEKL 505 Query: 286 LNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQIKT 338 + + L++G + + Q W ++++G + Sbjct: 506 TGYTRQEVIGKNPRLLKSGKISQDQYKQLWRTLTSGQEWHGEFHNQKKNGELFWESASIS 565 Query: 339 ---SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLD 395 + + FI DI++ ++ + + +D +TGLPNR + L Sbjct: 566 PIKNEEGVITHFIAIKEDITR--------RKAQDRILAYQANYDALTGLPNRFLAIDRLK 617 Query: 396 DLVDKA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIE 451 + +A V I +D ++V D+LG+ + D L +V R ++ L+ + R+ Sbjct: 618 LAILQAERQEQRVAVMFIDLDRFKNVNDTLGHEYGDLLLKQVAERLKKCLRKSDTVARLG 677 Query: 452 GTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYL 508 G +F+++ S+ IA ++ + + KP + ++ ++ SIGI+ D G + + L Sbjct: 678 GDEFLIIIPNLKQPSHCKGIAKKILSSLEKPFNLLEEEAFISASIGITLYPDDGDDVNAL 737 Query: 509 LSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAE 568 + A AM ++ G N ++F++ MNE + R+++ L +A+ ++ LVYQP + + Sbjct: 738 MRNADTAMYLGKRGGRNDFKFYTLGMNETNRTRIIIENLLHQALKKKEIYLVYQPIMELK 797 Query: 569 TGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIH 628 T ++ G EAL RW++P G V P +FIP+AEE G I +G WVI++AC+++ +W++Q Sbjct: 798 TEKVIGAEALLRWNNPQLGQVSPDQFIPIAEETGLINQLGAWVISQACQEVVQWKAQG-T 856 Query: 629 IPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILR 688 +++VNLS FR ++L ++DA+ GI H L +EITE +++E + L Sbjct: 857 PISVAVNLSPRQFRDSKLLKIITDAIAVNGITNHDLELEITEKLLLEDSPGSQGILSQLH 916 Query: 689 DMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLN 748 M LS+DDFGTG+S LS L+ P +KID+SF+ ++ + L++ I ++ LN Sbjct: 917 QMNFPLSIDDFGTGYSALSYLIKFPFNRLKIDRSFITDMTHSQKAMGLVKTIIAMSHGLN 976 Query: 749 LTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 L V+AEGVET EQ L+ C QGYFFSRPL EE ++ Sbjct: 977 LQVIAEGVETSEQLNSLKSQGCDYAQGYFFSRPLTGEEFRYYLQ 1020 >UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBJ6_METSD Length = 1150 Score = 831 bits (2147), Expect = 0.0, Method: Composition-based stats. Identities = 196/822 (23%), Positives = 354/822 (43%), Gaps = 43/822 (5%) Query: 4 TDADNAADGIFFPALEQNMMGAVLIN-ENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 T ++ G + + + + NP ++ GY +E+ D Sbjct: 337 TAELANQHQRLQQIIDGTAAGTWEWDIRSGDCI-VNPRWAEMLGYTPDELEPCTADSCRA 395 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWT--RFALSKVSAEGKVYYL- 119 + ++ + + + E + K+G IW R +++ S +G+ + Sbjct: 396 LCHPDDLEQLVQALEAHLRGETDYFASESRRRHKNGHWIWVADRGRVTRRSPQGEALTMS 455 Query: 120 ALVRDASVEMAQK----EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 + + + + Q + + V + D + + C+ + E FG+ Sbjct: 456 GTRLEITKLKLAETTLKQAVEQQKMFIQQAPICVAMFDRDMRYLACSNQWQEEFGHQQGS 515 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL 235 G+ + P+ P R Q+ L +++E L + G+ +W + I+P D Sbjct: 516 LLGLNHYDV--HPDIPEKWRQAHQRALAGERLEEEEDLWIRADGQHLWTRWMITPWMDDS 573 Query: 236 AHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNES 289 +Q ++++ +I+ +Q + S + + I + S Sbjct: 574 QTIQGIIISSENISARKQAEEELRLAHTVFEHSSEAMLVTDADNNIITINPAFSEMTGYS 633 Query: 290 HVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQIKTS--- 339 + L +G ++ + W I R++ G + Sbjct: 634 LEEVIGKNPKILSSGRQGKEFYQELWNTLETSGEWRGEIWNRRKSGEEYAEWLAINNIYS 693 Query: 340 SGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD 399 + + +DI+ E++++ I +D +T LPNR + L + Sbjct: 694 EDGKLFRRVALFSDIT--------EKKRADALIWNQANYDLLTQLPNRRLFSDRLQQEIK 745 Query: 400 KAV----SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF 455 K+ + I +D ++V D+LG++ D L+E +R + LK + R+ G +F Sbjct: 746 KSQHDHSQFALLFIDLDRFKEVNDTLGHSHGDYLLIEASHRIQRHLKETDTVGRLGGDEF 805 Query: 456 -VLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTA 512 V+++ D S +T IA + + ++ P ++ + L+ SIGI+ LL A Sbjct: 806 TVIIANLPDPSVMTLIAQRVLDALAAPYDLEGEIVYLSASIGITVFPEDATTSAELLKNA 865 Query: 513 HNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGEL 572 AM +KNG N + FF+P M M + R+ + L+ A+ NQ + +QP + + + Sbjct: 866 DQAMYEAKKNGRNRFSFFTPMMQAMAQARMRMMRDLRNALGLNQFTVYFQPIVDLSSQRI 925 Query: 573 YGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPAL 632 + EAL RW P G + P+ FIPLAEE G I IG WV ++ + + + + Sbjct: 926 HKAEALIRWQHPELGFISPAEFIPLAEETGLIHEIGDWVFQQSAQLVKQCIPIVGDDFQV 985 Query: 633 SVNLSALHFRSNQLPNQ-VSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMG 691 SVN S + FR +Q + + G+ GH + VEITE +++ D+ I ++ RD G Sbjct: 986 SVNKSPVQFRDRTQAHQDWMEYLSGLGLSGHNIVVEITEGLLLNADSGISDKLLHFRDAG 1045 Query: 692 VGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTV 751 + +++DDFGTG+S LS L + +KID+SFV E LAL EAI ++ L+L V Sbjct: 1046 MQVAIDDFGTGYSSLSYLKKFDIDYLKIDQSFVRNLSGEGEDLALCEAIATMAHKLDLRV 1105 Query: 752 VAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 +AEGVET Q ++L +I C QGY FSRP+PAEE + Sbjct: 1106 IAEGVETTAQRDLLAQIGCDYGQGYLFSRPVPAEEFMQLLER 1147 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 74/287 (25%), Gaps = 34/287 (11%) Query: 116 VYYLALVRD--ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCI 173 + ++ L+R + Q ++L +D D N + EM GY Sbjct: 323 LLWILLLRRSVKTKTAELANQHQRLQQIIDGTAAGTWEWDIRSGDCIVNPRWAEMLGYTP 382 Query: 174 SEASGMQPD---TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISP 230 E D L + + + L +T E + G IW+ Sbjct: 383 DELEPCTADSCRALCHPDDLEQLVQALEAHLRGETDYFASESRRRHKNGHWIWVADRGRV 442 Query: 231 -VYDVLAHLQNLVMTFSDITEERQIRQLEGNILAA----MCSSPPFHEMGEIICR----- 280 + T +IT+ + + + +P M + R Sbjct: 443 TRRSPQGEALTMSGTRLEITKLKLAETTLKQAVEQQKMFIQQAPICVAMFDRDMRYLACS 502 Query: 281 -NIESVLNESHVSLFALR----NGMPIHWASSSHGAEIQNAQSWSAT--IRQRDGAPAGI 333 + SL L + +H + + + DG Sbjct: 503 NQWQEEFGHQQGSLLGLNHYDVHPDIPEKWRQAHQRALAGERLEEEEDLWIRADGQHLWT 562 Query: 334 LQIKT---SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQ 377 + T I +IS ++++ + + L Sbjct: 563 RWMITPWMDDSQTIQGIIISSENISA--------RKQAEEELR-LAH 600 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 830 bits (2146), Expect = 0.0, Method: Composition-based stats. Identities = 202/788 (25%), Positives = 353/788 (44%), Gaps = 59/788 (7%) Query: 53 IGNNIDMLIPRDLRPAHPEYIRHNREGGKARVE-GMSRELQLEKKD-----GSKI-WTRF 105 +G +I +LI L + +R E E + E+KD G + WTR Sbjct: 166 LGLSI-LLIVGILHSRFLKPMRTLTEQATHLAELHLDTPFLWERKDEIGRLGRHLEWTRA 224 Query: 106 ALSKVSAEGKVYYLALVRDASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDPERHIVQC 161 L ++ E + LAL D + ++ R+ +++ + ++ Sbjct: 225 ELKRLIDELRAKTLALESDIARRREVEDALRRSENKYRELFWSNLDGIVISSLDGQVIDA 284 Query: 162 NRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEK 221 N AF + Y + + +L+ + ++L D+ E + R G Sbjct: 285 NPAFLNLMCYSLDQLKLQNFWSLIAPESEGMERFNLDNKVLRFGYCDEFEASYINRFGNV 344 Query: 222 IWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI---- 277 + + + D + + DI+E+R + ++ + + Sbjct: 345 VPVSVKTVAMRDSFGRINAVWRMVRDISEKRVAEERMQLAAKVFENTVEGIMITDADKRI 404 Query: 278 --ICRNIESVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDG 328 + R + + L +G + + I SW + R+++G Sbjct: 405 RSVNRAFSQITGFGQQEVLGQKPDMLSSGRHDETFYEAMWSAINEHGSWQGELWNRRKNG 464 Query: 329 APAGIL---QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLP 385 ++ E + ++ +D+S E++ + + I+ L FD +TGLP Sbjct: 465 EVYPEWLAISAVRNAVGEITHYVAIFSDLS--------ERKAADERIQFLAHFDVLTGLP 516 Query: 386 NRNNLHNYLDDLVDKAVSPVVYLIGVD------------HIQDVIDSLGYAWADQALLEV 433 NR ++ + ++ + A D + + +SLG++ D L + Sbjct: 517 NRAHIQDRVELAIQNATR--------DNERLALLLLDLDRFKTINESLGHSAGDALLQVL 568 Query: 434 VNRFREKLKPDQYLCRIEGTQFVLVSL-ENDVSNITQIADELRNVVSKPIMIDDKPFPLT 492 R R L + + R G +F+++ D + A+ +R V+ P+ + + +T Sbjct: 569 AERIRSTLLTGEVVARQGGDEFIVLLPLIADPGSAALAAERIREVLEPPVELFNHSISIT 628 Query: 493 LSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKE 550 SIGIS G++ + L+ A AM + + G N ++F++ +N +E L + + L+ Sbjct: 629 PSIGISVFPDDGRDFETLVRNADAAMYHAKSAGRNSYKFYTADLNARAREILEIESQLRY 688 Query: 551 AISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRW 610 A+ ++ L YQPQ+ +TGE+ G EAL RW P G + P RFI +AEE G I IG W Sbjct: 689 ALDRDEFVLHYQPQVDLKTGEIIGAEALIRWQHPELGLLGPVRFIEVAEERGFIVQIGNW 748 Query: 611 VIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITE 670 VI EACRQLA+WR Q + +L+VNLS L FR L + A+ A G+ G L VE+TE Sbjct: 749 VIQEACRQLAQWRRQGLPRISLAVNLSTLQFRQQDLAVHLQRALSAHGLVGSDLDVEVTE 808 Query: 671 SMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTE 730 S++M+ I ++ MG+ LS+DDFGTG+S LS L ++KID+SFV + Sbjct: 809 SVIMDDVETTIHTIDRIKSMGLQLSIDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPMD 868 Query: 731 KRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 A+ AI ++ ++LN+TV+AEGVET EQ++ L + C QGY ++P+PA+E Sbjct: 869 ADDSAIARAIINMAKNLNMTVIAEGVETIEQWKFLDREGCHAAQGYLLAKPVPAKEFERL 928 Query: 791 MSSVLPLK 798 + + L Sbjct: 929 LEKGVLLP 936 Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 104/262 (39%), Gaps = 10/262 (3%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 ++ DA ++ + N+ G V+ + + +V+ NPA L Y +++ N LI Sbjct: 249 EVEDALRRSENKYRELFWSNLDGIVISSLDGQVIDANPAFLNLMCYSLDQLKLQNFWSLI 308 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQ--LEKKDGSKIWTRFALSKVSAE-GKVYY 118 + E + K G E + + G+ + + G++ Sbjct: 309 APES-----EGMERFNLDNKVLRFGYCDEFEASYINRFGNVVPVSVKTVAMRDSFGRINA 363 Query: 119 LA-LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 + +VRD S + +E+ + ++ +++ D ++ I NRAF+++ G+ E Sbjct: 364 VWRMVRDISEKRVAEERMQLAAKVFENTVEGIMITDADKRIRSVNRAFSQITGFGQQEVL 423 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 G +P +L+ + + + Q E + GE +IS V + + Sbjct: 424 GQKP-DMLSSGRHDETFYEAMWSAINEHGSWQGELWNRRKNGEVYPEWLAISAVRNAVGE 482 Query: 238 LQNLVMTFSDITEERQIRQLEG 259 + + V FSD++E + + Sbjct: 483 ITHYVAIFSDLSERKAADERIQ 504 Score = 107 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 54/155 (34%), Gaps = 11/155 (7%) Query: 7 DNAADGIFFPA---LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 A+ A E + G ++ + + + N A ++ G+ ++EV+G DML Sbjct: 374 KRVAEERMQLAAKVFENTVEGIMITDADKRIRSVNRAFSQITGFGQQEVLGQKPDMLSSG 433 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYLAL 121 H E EL +K+G W + + + +Y+A+ Sbjct: 434 R----HDETFYEAMWSAINEHGSWQGELWNRRKNGEVYPEWLAISAVRNAVGEITHYVAI 489 Query: 122 VRDASVEMAQKEQTRQL--IIAVDHLDRPVIVLDP 154 D S A E+ + L + L + D Sbjct: 490 FSDLSERKAADERIQFLAHFDVLTGLPNRAHIQDR 524 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 830 bits (2144), Expect = 0.0, Method: Composition-based stats. Identities = 185/763 (24%), Positives = 326/763 (42%), Gaps = 37/763 (4%) Query: 56 NIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEK-KDGSKIWTRFALSKVSAEG 114 + P +++NREG + + + + + ++ A+ + Sbjct: 756 TFTNINPGQYVLHVRHSLQYNREGSQTLLVNLKVQAPFYRTPFAYTLYCLLAIGLLIWGL 815 Query: 115 KVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS 174 + E + + +L +A+ + + + + V + + Sbjct: 816 HWRKQKRQQQREFETSIRASEERLKLALWASGDGMWDWNIKENKVYRTNMDASVSHWSSH 875 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV-YD 233 ++ + + L +T + E+ + G+ IWI V D Sbjct: 876 NLL----HENMHPEDREKFKYELAEHLQGRTPFFEIEYRIEGAFGKWIWILDRGKVVETD 931 Query: 234 VLAHLQNLVMTFSDITEERQIRQLE---GNILAAMCSSPPFHEMGEIICRNIESVLNESH 290 + T +IT + I +L +M + + I + + Sbjct: 932 AHMQPMRMTGTNRNITSRKLIENELVLSSQVLNSMNEAVVVAGLDYKIRSVNPAFSAITG 991 Query: 291 VSLFALRNGMPIHWASSS-------HGAEIQNAQSWSATIRQRDGAPAGILQI-----KT 338 S + + +H A ++ + W I R+ IL Sbjct: 992 YSERQITDKYLVHLAYKQQRELFNSIEQQLLRHKHWVGEIWIRNKQRKAILVWLEINQVI 1051 Query: 339 SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV 398 ETS F+ DI+ E++K+ Q + L FD +TGLPNR + L+ + Sbjct: 1052 DIKGETSHFVAVFTDIT--------ERKKAEQDLRFLASFDTLTGLPNRTLFQDRLNHAI 1103 Query: 399 DKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQ 454 +A + + +D + + DS+G+ D L R + ++ + R+ G + Sbjct: 1104 TQAHRANNIVALLFLDLDRFKHINDSMGHHVGDLLLKAAAKRLQNAVREGDTVARLGGDE 1163 Query: 455 FVLVSLENDVSNITQ-IADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLST 511 F ++ + I++++ P +++DK ++ SIGIS N D L+ Sbjct: 1164 FTIILEGVAKTKAATLISEKVLRAFQTPFLLEDKSLTISTSIGISLYPNDADNADSLIKF 1223 Query: 512 AHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGE 571 A AM + + G N +QF++ +NE+ ++L A LK+AI N+L LVYQP+ G Sbjct: 1224 ADTAMYHAKSLGRNNFQFYTHKLNEIATRHVLLEAGLKQAIHRNELSLVYQPKFSLRDGS 1283 Query: 572 LYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPA 631 L G+EAL RWH G + P FIPLAEE G I IG WVI AC+QLAEW + + + Sbjct: 1284 LTGLEALLRWHHTELGPISPVEFIPLAEETGIINQIGHWVINHACQQLAEWNALGFNNIS 1343 Query: 632 LSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMG 691 ++VNLSA + + + + A+ G+ L +E+TESM+M + + + L+ +G Sbjct: 1344 MAVNLSARQLK-ADIISTIEVALAVSGLPAQSLELELTESMIMGNPQDSVSILSKLKALG 1402 Query: 692 VGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTV 751 + +++DDFGTG+S LS L P+ +KID+ FV + A+ AI ++ SL L V Sbjct: 1403 LTIAIDDFGTGYSSLSYLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNV 1462 Query: 752 VAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 VAEGVET+ Q L C +QG+ S+PL A++ + + Sbjct: 1463 VAEGVETQAQLNFLGLQGCDEVQGFLLSKPLSAKDCLTLLGNQ 1505 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 45/320 (14%), Positives = 104/320 (32%), Gaps = 17/320 (5%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + + A++ AL + G N + ++ + + ++ N + Sbjct: 827 EFETSIRASEERLKLALWASGDGMWDWNIKENKVYRTNMDASVSHWSSHNLLHEN----M 882 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAE---GKVYY 118 + R + + +G R E ++E G IW V + + Sbjct: 883 HPEDREKFKYELAEHLQG---RTPFFEIEYRIEGAFGKWIWILDRGKVVETDAHMQPMRM 939 Query: 119 LALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 R+ + + + ++ ++ V+V + I N AF+ + GY + + Sbjct: 940 TGTNRNITSRKLIENELVLSSQVLNSMNEAVVVAGLDYKIRSVNPAFSAITGYSERQITD 999 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 L + + ++Q L + E + + + I + I+ V D+ Sbjct: 1000 KYLVHLAY--KQQRELFNSIEQQLLRHKHWVGEIWIRNKQRKAILVWLEINQVIDIKGET 1057 Query: 239 QNLVMTFSDITEERQIRQLEG-----NILAAMCSSPPFHEMGEIICRNIESVLNESHVSL 293 + V F+DITE ++ Q + L + + F + N + Sbjct: 1058 SHFVAVFTDITERKKAEQDLRFLASFDTLTGLPNRTLFQDRLNHAITQAHRANNIVALLF 1117 Query: 294 FALRNGMPIHWASSSHGAEI 313 L I+ + H ++ Sbjct: 1118 LDLDRFKHINDSMGHHVGDL 1137 Score = 80.0 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 42/375 (11%), Positives = 94/375 (25%), Gaps = 56/375 (14%) Query: 1 MKLT--------DADNAADGIFFP-ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREE 51 M++T + + L V+ + ++ NPA + GY + Sbjct: 937 MRMTGTNRNITSRKLIENELVLSSQVLNSMNEAVVVAGLDYKIRSVNPAFSAITGYSERQ 996 Query: 52 VIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGS--KIWTRFALSK 109 + L+ + + ++ E R + E+ + K +W Sbjct: 997 I---TDKYLVHLAYKQQ--RELFNSIEQQLLRHKHWVGEIWIRNKQRKAILVWLEINQVI 1051 Query: 110 VSAEGKVYYLALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIV----QCNR 163 +++A+ D + ++ R L + L + D H + + N Sbjct: 1052 DIKGETSHFVAVFTDITERKKAEQDLRFLASFDTLTGLPNRTLFQDRLNHAITQAHRANN 1111 Query: 164 AFTEMFGYCISEA------SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTR 217 +F + G LL RLQ + + Sbjct: 1112 IVALLF-LDLDRFKHINDSMGHHVGDLLL-----KAAAKRLQNAVREGDTVA------RL 1159 Query: 218 TGEKIWIKASISPVYDVL----AHLQNLVMT---FSDITEERQIRQLEGNILAAMCSSPP 270 G++ I + T D + ++ Sbjct: 1160 GGDEFTIILEGVAKTKAATLISEKVLRAFQTPFLLEDKSLTISTSIGISLYPNDADNADS 1219 Query: 271 FHEMGEI-------ICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATI 323 + + + RN + + + H E+ + Sbjct: 1220 LIKFADTAMYHAKSLGRNNFQFYTHKLNEIATRHVLLEAGLKQAIHRNELSL--VYQPKF 1277 Query: 324 RQRDGAPAGILQIKT 338 RDG+ G+ + Sbjct: 1278 SLRDGSLTGLEALLR 1292 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 829 bits (2143), Expect = 0.0, Method: Composition-based stats. Identities = 193/703 (27%), Positives = 312/703 (44%), Gaps = 42/703 (5%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 L+ + A + D + V D V N A+ ++ G + + G Sbjct: 124 LIERKTTRQALTLSEARFRAMSDASPLGIFVSDIHGECVYTNAAYHKISGLNLEQTLGTN 183 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 ++ + + A Q E L G +W + + + + D L HL+ Sbjct: 184 WSMAIHPDDRQRVLLE-WRAAALGEATFQTEARFLRADGSIVWARLNAAAMLDGL-HLRG 241 Query: 241 LVMTFSDITEERQIRQLEGNILAAMCSSPPFHE------------------MGEIICRNI 282 V T DI+E + + + Sbjct: 242 HVQTVEDISERKITEDALFEEKERAQVTLNSIGDAVLTTNLKGDVTYLNLVAEMMTGWPR 301 Query: 283 ESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSW----SATIRQRDGAPAGIL---Q 335 E+ + + +F + NG A + I+ ++ + + RDG A I Sbjct: 302 EAAIGQPLSEVFRILNGTTREVAPNPAQLAIRENRTVGLAADSILIHRDGLEAAIEDSAA 361 Query: 336 IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLD 395 + + + + D+S E + L Q D +TGLPNR L L Sbjct: 362 PIHNRDGQVAGAVIVFHDVS--------ESRAMALKMAHLAQHDFLTGLPNRALLTERLS 413 Query: 396 DLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIE 451 + +A + + +D+ + + DSLG+A DQ L +V R ++ +CR Sbjct: 414 RAIGQARRHNKRVGMLFLDLDYFKHINDSLGHAVGDQLLQQVAERLIVCIRDTDTVCRQG 473 Query: 452 GTQFVLVS-LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYL 508 G +FV++ + IA++L ++P +I ++LSIGIS D G + D + Sbjct: 474 GDEFVILLAEIEQARDAAPIAEKLLAAFAEPCLIAGNELHVSLSIGISIYPDDGMDADTV 533 Query: 509 LSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAE 568 + A AM + + NG N +QFF+ MN RL + L+ A+ + L YQP+I Sbjct: 534 MKNADTAMYHAKANGRNNYQFFTTEMNTRAVRRLFIEGNLRRALRQGEFMLYYQPKIDLA 593 Query: 569 TGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIH 628 +G + G EAL RW DP HG V P +F+P+AEE G I IG WV+ EACRQ+ W+ + Sbjct: 594 SGMMIGSEALIRWQDPEHGLVYPKQFVPIAEESGLIVPIGSWVLREACRQVRAWQESGLV 653 Query: 629 IPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILR 688 +SVN+SA+ FR V+ + G+ L +E+TES++M ++ L+ Sbjct: 654 AVPVSVNISAVEFRHKDFLEGVALILKETGMLPSYLELELTESILMHDAESSATVLEALK 713 Query: 689 DMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLN 748 MG+ L++DDFGTG+S LS L P+ +KID+SFV + +++ A+ +G++L Sbjct: 714 TMGMQLAIDDFGTGYSSLSYLKRFPINTLKIDQSFVHDIAIDPDDASIVGAMIGMGKNLK 773 Query: 749 LTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 VVAEGVET+EQ LR +HC QG+ F RPLPA+E + Sbjct: 774 QRVVAEGVETEEQLAFLRTLHCDEGQGFLFGRPLPADEFARLL 816 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 829 bits (2142), Expect = 0.0, Method: Composition-based stats. Identities = 178/692 (25%), Positives = 303/692 (43%), Gaps = 36/692 (5%) Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCI---SEASGMQP 181 +QT +L +L+ + I + E+FG G Sbjct: 260 VIQRAELIKQTYKLKRYQRIAGLGSYLLNFKTGIWTSSEILDELFGIDQSYNHSTEG--W 317 Query: 182 DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTR-TGEKIWIKASISPVYDVLAHLQN 240 +++ + + ++L K E+ ++ + W+ +D Sbjct: 318 TLIVHPDDRIKMDDYLKNEVLAKGKPFDKEYRIVRQTDQSIRWLHGLGKLEFDNDGLPVK 377 Query: 241 LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIIC---RNIESVLNESHVSLFALR 297 +V T DITE+++ + A+ SP + ++ + + S + Sbjct: 378 MVGTVQDITEQKRASDSLLKLSLAVEQSPNSIVITDLDGKIEYVNNMFIKVTGYSRDEVL 437 Query: 298 NGMPIHWASS--------SHGAEIQNAQSWSATI--RQRDGAPAGILQIKTS---SGAET 344 P S A + W I R++D + T + + Sbjct: 438 GQNPRILKSGKTPQTTFKEMWAHLTRGDIWHGEIINRRKDKSIYIESATITPVKQADGKI 497 Query: 345 SAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHN----YLDDLVDK 400 + ++ DI+ E++K+ + E L FD +TGLPNR L L+ Sbjct: 498 TNYVAIKEDIT--------EKKKAEAYTENLAYFDQLTGLPNRRMLQAQVKYRLNMAQSN 549 Query: 401 AVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL 460 V + +D+ +++ DSLG+ DQ L+++ R ++ ++ + R+ G +F+++ Sbjct: 550 HQPLTVMFLDLDNFKNINDSLGHTVGDQVLIKIAKRIKKAIREVDTVSRLGGDEFIMLFP 609 Query: 461 ENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDY 518 D + IA L +SK +++ +T SIGI+ G + LL A AM Sbjct: 610 NTDANAAMHIATTLIQEISKASVVEHNELTITPSIGIAIYPNDGNDFKTLLKNAETAMYR 669 Query: 519 IRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEAL 578 ++ + NG+ F +P M L L AL+ A+ N+L+L YQPQI G++ G EAL Sbjct: 670 VKNDSRNGFHFVTPEMQLSASRNLQLENALRHALKRNELQLYYQPQISTSNGQIIGAEAL 729 Query: 579 ARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSA 638 RWH P G + P+ FIP+AE G+I IG WV+ A RQ W ++VNLS Sbjct: 730 LRWHHPELGMISPAEFIPIAESSGQIIEIGEWVLRTAIRQTKNWMDDGFTPMIIAVNLSV 789 Query: 639 LHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDD 698 + FR L ++D + + L +E+TE++ M + + + G+ +S+DD Sbjct: 790 VQFRQKNLLTLITDILAEVQLPNEYLELELTEAVTMHDPESVINVMNTFHEQGIRMSIDD 849 Query: 699 FGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVET 758 FGTG+S LS L V ++KID+SF+ + A++ AI + +L L +AEGVET Sbjct: 850 FGTGYSSLSYLKKFKVYKLKIDQSFIRDISNDPDDRAIVSAIIDMASNLGLQTIAEGVET 909 Query: 759 KEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 EQ LR C +QGY+FS+PLP+ E + Sbjct: 910 AEQLAFLRLHGCHEVQGYYFSKPLPSVEFEQF 941 Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 78/204 (38%), Gaps = 7/204 (3%) Query: 57 IDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKK-DGSKIWTRF--ALSKVSAE 113 +++ D R +Y+++ + + +E ++ ++ D S W L + Sbjct: 317 WTLIVHPDDRIKMDDYLKNEVLA---KGKPFDKEYRIVRQTDQSIRWLHGLGKLEFDNDG 373 Query: 114 GKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCI 173 V + V+D + + + +L +AV+ +++ D + I N F ++ GY Sbjct: 374 LPVKMVGTVQDITEQKRASDSLLKLSLAVEQSPNSIVITDLDGKIEYVNNMFIKVTGYSR 433 Query: 174 SEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYD 233 E G P +L + P + L + E + + A+I+PV Sbjct: 434 DEVLGQNP-RILKSGKTPQTTFKEMWAHLTRGDIWHGEIINRRKDKSIYIESATITPVKQ 492 Query: 234 VLAHLQNLVMTFSDITEERQIRQL 257 + N V DITE+++ Sbjct: 493 ADGKITNYVAIKEDITEKKKAEAY 516 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 56/144 (38%), Gaps = 8/144 (5%) Query: 2 KLTDADNAADGIFFP--ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDM 59 +T+ A+D + A+EQ+ V+ + + ++ + N K+ GY R+EV+G N + Sbjct: 384 DITEQKRASDSLLKLSLAVEQSPNSIVITDLDGKIEYVNNMFIKVTGYSRDEVLGQNPRI 443 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS--AEGKVY 117 L P+ R + E+ +KD S ++ V Sbjct: 444 LKSG----KTPQTTFKEMWAHLTRGDIWHGEIINRRKDKSIYIESATITPVKQADGKITN 499 Query: 118 YLALVRDASVEMAQKEQTRQLIIA 141 Y+A+ D + + + T L Sbjct: 500 YVAIKEDITEKKKAEAYTENLAYF 523 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 829 bits (2142), Expect = 0.0, Method: Composition-based stats. Identities = 180/692 (26%), Positives = 314/692 (45%), Gaps = 37/692 (5%) Query: 130 AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQ----CNRAFTEMFGYCISEASGMQPD-TL 184 +++ V+ + L P + + ++ GY E Sbjct: 648 ELDYANKRINQIVNLSPAVIYTLKPNAEGIFHSDFISENIYQITGYAKDEWLKDNFWLDH 707 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 ++ + A +++L++T ++ + G IWI+ ++ D +V Sbjct: 708 IHTEDLAAAL--DSKKILFETGSLNHQYRFMHANGGYIWIEDQLTLTRDNNGKPLEIVGA 765 Query: 245 FSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICR---NIESVLNESHVSLFALRNGMP 301 + DIT+ + SS + + + + + + P Sbjct: 766 WLDITDRLSAEEKLRLNAKVFESSRDGIVITDKNNKIISVNNAFTTITGYEAKEVVGKNP 825 Query: 302 IHW--------ASSSHGAEIQNAQSWSATI--RQRDGAPAGIL---QIKTSSGAETSAFI 348 S+ I W + ++++G + + S I Sbjct: 826 HMLASEKLEESFYSAMWDSIGVMGYWQGEVINQRKNGEIYTQWLSISTIKDADGKISQHI 885 Query: 349 ERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----P 404 ++DIS E++ + + I+ L FDP+T LPN+N L++ + A Sbjct: 886 GIISDIS--------ERKVAEERIQFLSNFDPLTNLPNKNLLNDRTKLALATAKRLKTAV 937 Query: 405 VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDV 464 + + +D + + +SLG + DQ + E+ RF ++P+ +CR G +F+L+ D Sbjct: 938 TLMFVDLDRFKFINESLGPSIGDQVVKELAERFVAYMRPEDTVCRQGGDEFILLLPNTDA 997 Query: 465 SNITQIADELRNVVSKPIMIDDKPFPLTLSIGIS--YDLGKNRDYLLSTAHNAMDYIRKN 522 +A +L ++V++P + LT SIGIS G++ + L +A A+ + Sbjct: 998 EGAAHVAKKLLDIVAQPFNFHGQKIVLTASIGISAYPQDGESFEQLAQSADAALYRAKYE 1057 Query: 523 GGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWH 582 G N +QFF+ M+E + L+L + L+ AI + + L YQPQ ++T ++ G+EAL RW Sbjct: 1058 GRNNFQFFARQMHEQAHDILLLESELRSAIEHEEFLLYYQPQYDSKTSKIIGLEALIRWQ 1117 Query: 583 DPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFR 642 P G V P+ FIP+AEE G I IG WV+ A +QLA W+ + ++VNLS + F Sbjct: 1118 HPEKGLVSPAVFIPIAEESGLIAEIGDWVLRTAVKQLASWQEAGLGAVPVAVNLSVVQFH 1177 Query: 643 SNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTG 702 + L V + +D L +E+TE + ME + L +GV LS+DDFGTG Sbjct: 1178 QDTLYGSVCQILRDTKVDPSMLELELTEGIAMEDSERTLNVLNQLNSLGVRLSIDDFGTG 1237 Query: 703 FSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQF 762 +S LS L + ++KID+SFV + + A++ AI S+ +SL+ +AEGVET EQ Sbjct: 1238 YSSLSYLKKFKIDKLKIDQSFVRGIGSHPQDAAIITAIISMAKSLSFKTIAEGVETLEQL 1297 Query: 763 EMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 L C IQGY+FS+PLP+ E+ +++ Sbjct: 1298 NFLIANSCDEIQGYYFSKPLPSTEVTKLLANQ 1329 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 83/242 (34%), Gaps = 17/242 (7%) Query: 22 MMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGK 81 G + F + ++ GY ++E + +N L H E + + K Sbjct: 674 AEGIFHSD------FISENIYQITGYAKDEWLKDNFW------LDHIHTEDLAAALDSKK 721 Query: 82 ARVEGMS--RELQLEKKDGSKIWTR--FALSKVSAEGKVYYLALVRDASVEMAQKEQTRQ 137 E S + + +G IW L++ + + + D + ++ +E+ R Sbjct: 722 ILFETGSLNHQYRFMHANGGYIWIEDQLTLTRDNNGKPLEIVGAWLDITDRLSAEEKLRL 781 Query: 138 LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIR 197 + +++ D I+ N AFT + GY E G P L + Sbjct: 782 NAKVFESSRDGIVITDKNNKIISVNNAFTTITGYEAKEVVGKNPHML-ASEKLEESFYSA 840 Query: 198 LQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQL 257 + + Q E + + GE SIS + D + + SDI+E + + Sbjct: 841 MWDSIGVMGYWQGEVINQRKNGEIYTQWLSISTIKDADGKISQHIGIISDISERKVAEER 900 Query: 258 EG 259 Sbjct: 901 IQ 902 Score = 107 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 65/160 (40%), Gaps = 10/160 (6%) Query: 1 MKLTDADNAADGIFFPA--LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNID 58 + +TD +A + + A E + G V+ ++N++++ N A + GY+ +EV+G N Sbjct: 767 LDITDRLSAEEKLRLNAKVFESSRDGIVITDKNNKIISVNNAFTTITGYEAKEVVGKNPH 826 Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKV 116 ML E + E+ ++K+G W + K + Sbjct: 827 MLASE----KLEESFYSAMWDSIGVMGYWQGEVINQRKNGEIYTQWLSISTIKDADGKIS 882 Query: 117 YYLALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDP 154 ++ ++ D S +E+ + L + +L ++ D Sbjct: 883 QHIGIISDISERKVAEERIQFLSNFDPLTNLPNKNLLNDR 922 Score = 88.5 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 60/163 (36%), Gaps = 22/163 (13%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 + A+ + +Q G ++++ + + N AA + GY++ E++G + ++ + Sbjct: 347 SRQLAESRYQKLFDQASDGVLVLDHQHQFIAANLAATNMLGYQQGELLGMRLPDVL-INN 405 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDA 125 HPE+ + + E Q +KDGS+ K+ YY ++RD Sbjct: 406 VTKHPEFNTNLISDIPTK-----DEWQYRRKDGSRFIAEVNCRKLDKN---YYFTIIRDL 457 Query: 126 SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEM 168 + + + L L N+A M Sbjct: 458 TERKLAENRILHLTQLYQALSE-------------VNQAIVRM 487 Score = 76.6 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 80/266 (30%), Gaps = 36/266 (13%) Query: 131 QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP-- 188 ++ + D V+VLD + + N A T M GY E GM+ +L Sbjct: 348 RQLAESRYQKLFDQASDGVLVLDHQHQFIAANLAATNMLGYQQGELLGMRLPDVLINNVT 407 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 + P N + + +DE+ + G + + + + D+ Sbjct: 408 KHPEFNTNLISDI-----PTKDEWQYRRKDGSRFIAEVNCRKL-----DKNYYFTIIRDL 457 Query: 249 TEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSS 308 TE + ++ + E+ + I R + + H LF + +++ Sbjct: 458 TERKLAENRILHLTQLYQA---LSEVNQAIVR-----MGDDH-ELFPVVCRSSVNFGGMK 508 Query: 309 HGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVA-DISQHMAALALEQEK 367 +W + + + + + DI + + Sbjct: 509 M--------AWVGQLDEESQQIFPV-AVHGDGIEYIDGLVISANADIPEGQGPTSTALRN 559 Query: 368 SRQHIEQLIQFDPMTGLPNRNNLHNY 393 +R I D +T PN + Sbjct: 560 NRMMIIN----DFLTS-PNTTLWLDK 580 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 23/204 (11%), Positives = 58/204 (28%), Gaps = 35/204 (17%) Query: 190 FPADNRIRLQQLLWKTAR---------DQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 + +++ E +L G+ + + S + + A L Sbjct: 284 HERALTQIISRVIEVGGTKWTLFFQTTPAFETRIL-PYGKPMLVALLGSTLTILSAFLAW 342 Query: 241 LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEII--CRNIESVLNESHVSLFALRN 298 +++ + E R + A + I ++L L +R Sbjct: 343 FLLSSRQLAESR----YQKLFDQASDGVLVLDHQHQFIAANLAATNMLGYQQGELLGMRL 398 Query: 299 GMPIHWASSSHGA-------EIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERV 351 + + H +I W R++DG+ + + + + + Sbjct: 399 PDVLINNVTKHPEFNTNLISDIPTKDEWQY--RRKDGSRF--IAEVNCRKLDKNYYFTII 454 Query: 352 ADISQHMAALALEQEKSRQHIEQL 375 D++ E++ + I L Sbjct: 455 RDLT--------ERKLAENRILHL 470 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 827 bits (2137), Expect = 0.0, Method: Composition-based stats. Identities = 198/756 (26%), Positives = 344/756 (45%), Gaps = 51/756 (6%) Query: 71 EYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMA 130 E R E SR +L + WTR L ++ E + LAL D + Sbjct: 188 EQARLLAELKLDSPFEWSRRDELGRLGTHLEWTRSELKRLVDELRAKTLALEADIARRRE 247 Query: 131 QKEQTRQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 ++ R+ +++ + ++ N AF + Y + + +L+ Sbjct: 248 VEDALRRSENKYRELFWSNLDGIVISSLDGQVIDANPAFLNLMCYSLDQLKQQNFWSLVA 307 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 + ++L D+ E L R ++ + + D + + Sbjct: 308 EESEALERFNLDNKVLRFGYCDEFEATYLNRFDNQVPVSVKTVAMRDAFGRINAVWRMVR 367 Query: 247 DITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESHVSLFA----- 295 DI+E+R + ++ + + + R + + + Sbjct: 368 DISEKRAAEERVQLAAKVFENTVEGIMITDADRRIRSVNRAFTEITGYTQHEVLGQKTSI 427 Query: 296 LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQI---KTSSGAETSAFIER 350 L +G I SW + R+++G +S E + ++ Sbjct: 428 LSSGRHDEPFYEQMWQSIAEHGSWQGELWNRRKNGEVYPEWLAINAVRNSLGEITHYVAI 487 Query: 351 VADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIG 410 +D++ E++ + + I+ L FD +T LPNR ++ + ++ + AV Sbjct: 488 FSDLT--------ERKAADERIQFLAHFDVLTSLPNRIHMQDRVELAIHNAVR------- 532 Query: 411 VD------------HIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV 458 D + V +SLG++ D L +R + + P + L R G +F+++ Sbjct: 533 -DNQRLALLLLDLDRFKTVNESLGHSAGDTLLQVAADRIKSVMAPGEMLARQGGDEFIIL 591 Query: 459 SL-ENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNA 515 +D A+ +R+V + PI + + +T SIGIS D G++ + L+ A A Sbjct: 592 LPVISDPGEAALAAERVRDVFANPIELHNHVLTITPSIGISVYPDDGRDYETLVRNADAA 651 Query: 516 MDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGI 575 M + + +G N ++F++ +N +E L + + L+ A+ ++ L YQPQ+ E+G + G Sbjct: 652 MYHAKSSGRNSYKFYTADLNARAREILAIESQLRFALERDEFVLHYQPQVEMESGRIVGA 711 Query: 576 EALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVN 635 EAL RW+ P G + P RFI +AEE G I IG WVIAEA RQL EWR + L++N Sbjct: 712 EALIRWNHPSLGLLGPVRFIQVAEERGFIVQIGNWVIAEATRQLVEWRRAGLPELTLAIN 771 Query: 636 LSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLS 695 LSAL FR L QV A+ + G+ GH L +E+TES++ME + I +++MG+ LS Sbjct: 772 LSALQFRQPDLALQVKQALESSGLPGHALDIEVTESIIMEDAQATIQTIDNMKNMGLRLS 831 Query: 696 VDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEG 755 +DDFGTG+S LS L ++KID+SFV + A+ AI ++ ++LN+ VVAEG Sbjct: 832 IDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPQDADDSAIARAIINMAKNLNMQVVAEG 891 Query: 756 VETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 VET EQ++ L + C +QGY ++PLPA++ + Sbjct: 892 VETMEQWQFLEQEGCDFVQGYLIAKPLPADDFAELL 927 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 66/374 (17%), Positives = 136/374 (36%), Gaps = 30/374 (8%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 ++ DA ++ + N+ G V+ + + +V+ NPA L Y +++ N L+ Sbjct: 247 EVEDALRRSENKYRELFWSNLDGIVISSLDGQVIDANPAFLNLMCYSLDQLKQQNFWSLV 306 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDG--SKIWTRFALSKVSAE-GKVYY 118 + E + K G E + + +++ + G++ Sbjct: 307 AEES-----EALERFNLDNKVLRFGYCDEFEATYLNRFDNQVPVSVKTVAMRDAFGRINA 361 Query: 119 LA-LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 + +VRD S + A +E+ + ++ +++ D +R I NRAFTE+ GY E Sbjct: 362 VWRMVRDISEKRAAEERVQLAAKVFENTVEGIMITDADRRIRSVNRAFTEITGYTQHEVL 421 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 G + +L+ ++ Q + + Q E + GE +I+ V + L Sbjct: 422 GQKTS-ILSSGRHDEPFYEQMWQSIAEHGSWQGELWNRRKNGEVYPEWLAINAVRNSLGE 480 Query: 238 LQNLVMTFSDITEERQIRQLEG--NILAAMCSSPPFHEMGEIICRNIESVLNE------- 288 + + V FSD+TE + + + S P M + + I + + + Sbjct: 481 ITHYVAIFSDLTERKAADERIQFLAHFDVLTSLPNRIHMQDRVELAIHNAVRDNQRLALL 540 Query: 289 --------SHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSS 340 + G + ++ + + ++ G IL S Sbjct: 541 LLDLDRFKTVNESLGHSAGDTLLQVAADRIKSVMAPGE---MLARQGGDEFIILLPVISD 597 Query: 341 GAETSAFIERVADI 354 E + ERV D+ Sbjct: 598 PGEAALAAERVRDV 611 >UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BF2_DECAR Length = 1038 Score = 827 bits (2137), Expect = 0.0, Method: Composition-based stats. Identities = 199/705 (28%), Positives = 315/705 (44%), Gaps = 43/705 (6%) Query: 118 YLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 LA+ + R+ +D L V +D N EM G+ E Sbjct: 335 MLAVAYLIRSKRLVGAALRERASLLDSLGEGVYGIDQNGQCTFINPKALEMLGWTADEVI 394 Query: 178 G--MQPDTLLNIPE--FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYD 233 G + P+ + Q L R Q E + G ++ S++P+ Sbjct: 395 GSDQHARFHHHRPDGSIYPSADCPVYQTLRDGQRRQGEEWFFNKDGRGFPVQYSVTPISR 454 Query: 234 VLAHLQNLVMTFSDITEERQIRQLEGNILAAMC--SSPPFHEMGEIICRNIESVLNESHV 291 + V+TF DI+E R+ +L A + + I R + + Sbjct: 455 QEDK-EGAVVTFRDISEARKADELMRIAAIAFETQEAMLVTDAKSQILRVNRAFTEVTGY 513 Query: 292 SLFALRNGMPIHWASSSH--------GAEIQNAQSWSATI--RQRDGAPAGIL---QIKT 338 S P S H ++ W I R+++G Sbjct: 514 SAAEAIGQTPALLKSGYHEDSFYKDLWTSLKENGLWRGEIWNRRKNGEIYPEWLTISAVR 573 Query: 339 SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV 398 E + F+ DI++ ++++ + I+ L +DP+T LPNR L+ L + Sbjct: 574 GQHGEITHFVSSFLDITK--------RKEAEEQIQFLALYDPLTHLPNRRLLNERLSKAL 625 Query: 399 ----DKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQ 454 + + I +D+ + + DS+G+ D L +V R RE ++ + + R+ G + Sbjct: 626 TSSGRQRRHAALLFIDLDNFKMINDSMGHDIGDLLLRQVALRLRESVRSNDTVSRLGGDE 685 Query: 455 FVLVSLENDVS------NITQIADELRNVVSKPIMIDDKPFPLTLSIG-ISYDLG-KNRD 506 FV++ E + I IA ++ + + +P + T SIG I + + + Sbjct: 686 FVILLEELSPNIHDATTQIEHIAQKMLDSLVQPYKFGEFSHHCTASIGAIPFMDATETIE 745 Query: 507 YLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIF 566 LL +A AM + G N FF PAM V+ R L L++A Q L QPQ+ Sbjct: 746 SLLKSADMAMYKAKAAGKNRLFFFDPAMQTEVEARAALERDLRQAQREKQFVLYLQPQVD 805 Query: 567 AETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN 626 ++G + G EAL RW P HG + P F +AEE I IG+WV+ EAC+QL W+ Sbjct: 806 -QSGHVSGAEALIRWQHPTHGLILPGEFTHVAEETRLILPIGQWVLEEACKQLVIWQKNP 864 Query: 627 -IHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQ 685 L++N+SAL FR+ + V+ A+H G +L +EITES+++E +R+Q Sbjct: 865 DTAHLTLAINVSALQFRNPDFVDDVARAIHESGALASRLKLEITESLLLEDIDGTIERMQ 924 Query: 686 ILR-DMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIG 744 +L+ +GVGLS+DDFGTG+S LS L LP+ +IKID+SFV A+ EA+ ++G Sbjct: 925 VLKNQLGVGLSLDDFGTGYSSLSYLKQLPLDQIKIDRSFVKDIHCNPNDAAIAEAVIALG 984 Query: 745 QSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPG 789 +S +L V+AEGVET EQ + L C QGY F RP P + P Sbjct: 985 RSFSLNVIAEGVETIEQRDALIARGCLTFQGYLFGRPGPIDAFPA 1029 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 72/378 (19%), Positives = 132/378 (34%), Gaps = 23/378 (6%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNN-IDMLIPR 63 A L+ G I++N + F NP A ++ G+ +EVIG++ Sbjct: 350 AALRER----ASLLDSLGEGVYGIDQNGQCTFINPKALEMLGWTADEVIGSDQHARFHHH 405 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKVYYLALV 122 + + E KDG +++++ + E K + Sbjct: 406 RPDGSIYPSADCPVYQTLRDGQRRQGEEWFFNKDGRGFPVQYSVTPISRQEDKEGAVVTF 465 Query: 123 RDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPD 182 RD S E R IA + ++V D + I++ NRAFTE+ GY +EA G P Sbjct: 466 RDISEARKADELMRIAAIAFE-TQEAMLVTDAKSQILRVNRAFTEVTGYSAAEAIGQTP- 523 Query: 183 TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 LL L L + + E + GE +IS V + + V Sbjct: 524 ALLKSGYHEDSFYKDLWTSLKENGLWRGEIWNRRKNGEIYPEWLTISAVRGQHGEITHFV 583 Query: 243 MTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLN---ESHVSLFALRNG 299 +F DIT+ ++ + LA + R +++ + + + + Sbjct: 584 SSFLDITKRKEAEEQI-QFLALYDPLTHLPNRRLLNERLSKALTSSGRQRRHAALLFIDL 642 Query: 300 MPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMA 359 + S G +I + +R R+ + + G E F+ + ++S ++ Sbjct: 643 DNFKMINDSMGHDIGDLLLRQVALRLRE-SVRSNDTVSRLGGDE---FVILLEELSPNIH 698 Query: 360 ALALEQEKSRQHIEQLIQ 377 IE + Q Sbjct: 699 DATT-------QIEHIAQ 709 >UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLV2_DESVM Length = 896 Score = 826 bits (2134), Expect = 0.0, Method: Composition-based stats. Identities = 196/853 (22%), Positives = 330/853 (38%), Gaps = 78/853 (9%) Query: 12 GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPE 71 G+ L+ ++ L + + N L G ++V+G + + P + A + Sbjct: 49 GLLRALLDNPLVALFLRDGEGRYLAANHLYADLAGVPGKDVVGLSPRDIFPHAVASALLD 108 Query: 72 YIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAE--GKVYYLALVRDASVEM 129 R E + ++ D ++ R A + E G L L D + + Sbjct: 109 EDRRVAEDSTPLLCE-----RMLPADEAERVFRVAKLPLPPEVAGPGAVLGLAFDVTALV 163 Query: 130 AQK-------------EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 + E T + + V V IV CNRA M G+ Sbjct: 164 EAEIEEEVRQRTAALAESTARFRALFELAPDAVYVRGEGGRIVDCNRAAERMSGHPRETL 223 Query: 177 SGMQPDTLL---------------------NIPEFPADNRIRLQQLLWK-----TARDQD 210 ++ LL + PA+ R T Sbjct: 224 LSLRTADLLPPDIEVRIDNLLTGCPLPVATHPDSTPAEPRQGTDGANPGSGFCPTGGFCM 283 Query: 211 EFLLLTRTG-EKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSP 269 E + G + + P+ + ++ DI+ R + ++ Sbjct: 284 EGICTAAHGPHEAEVSVEPLPLSLLRGKGMTALVVVHDISGRRTAERQARLFERVFRNAL 343 Query: 270 PFHEMGE------IICRNIESVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQS 318 + + + ++ L++ + Sbjct: 344 EGICITDPEGIIVAVNPAFTTITGYPADDAVGQSPRLLKSHHHDSAFYEDMWRALVEEGR 403 Query: 319 WSATI--RQRDGAPAGILQIKTSSGA---ETSAFIERVADISQHMAALALEQEKSRQHIE 373 W I R+R+G ++ T ++ DI+ E + I+ Sbjct: 404 WEDEIWNRRRNGEVYPEWLSISAIPGPTGRTEYYVAVFHDIT--------ELKAKESQIQ 455 Query: 374 QLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQA 429 D +TGLPNR L + L ++ A V + +D+ + V DSLG+ D Sbjct: 456 HQAHHDALTGLPNRALLRDRLGMAINGARREDRKVAVLSVDLDNFKQVNDSLGHMVGDIY 515 Query: 430 LLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKP 488 L + + R+ ++P L R+ G +FV+V + + Q+A+ L + P+ + + Sbjct: 516 LQQAAEQMRQMVRPQDTLARVGGDEFVVVLQDVEGERDAAQVAERLLARFTDPVRVQEHE 575 Query: 489 FPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGA 546 + S+GI+ G + D L+ A AM ++ G + F+PAMN+ RL L Sbjct: 576 LFVGASVGIALFPDDGDDPDTLVRNADIAMSRAKEQGKRRYHLFTPAMNDRAVRRLSLEG 635 Query: 547 ALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIEN 606 L A++ + YQP++ TG + G+EALARW P+ FIPLAE G I Sbjct: 636 DLHRALAAGDITAHYQPRVDLNTGLITGMEALARWIRADGSQEHPAEFIPLAESTGLIVP 695 Query: 607 IGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTV 666 +G ++ AC + ++VNLS FR L V+D + G+ H L + Sbjct: 696 LGEHMLRLACAKTRALCDAGHADLHVAVNLSVHQFRHRNLVGMVADVLAETGLPPHLLEL 755 Query: 667 EITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDR 726 EITES ++ +++ L +MG+ LSVDDFGTG+S L +L +LP+T +KID+SF+ Sbjct: 756 EITESTIVTDVDHTIRKLNQLAEMGIALSVDDFGTGYSSLYQLKNLPLTSLKIDRSFIRD 815 Query: 727 CLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEE 786 + A+ I ++ L L VVAEGVET EQ L C +QG+ FSRPLP +E Sbjct: 816 IPDDPNDAAIAATIITMADRLGLRVVAEGVETPEQLNFLLLEGCHEVQGFLFSRPLPPDE 875 Query: 787 IPGWMSSVLPLKI 799 ++ L + Sbjct: 876 FTALLARGRLLTV 888 Score = 175 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 58/290 (20%), Positives = 92/290 (31%), Gaps = 29/290 (10%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + T A + F E + E ++ N AAE++ G+ RE ++ L+ Sbjct: 173 QRTAALAESTARFRALFELAPDAVYVRGEGGRIVDCNRAAERMSGHPRETLLSLRTADLL 232 Query: 62 PRDLR--------------PAHPEYIRHNREGGKARV---------EGMSRELQLEKKDG 98 P D+ HP+ G G E + Sbjct: 233 PPDIEVRIDNLLTGCPLPVATHPDSTPAEPRQGTDGANPGSGFCPTGGFCME-GICTAAH 291 Query: 99 SKIWTRFALSKVS----AEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDP 154 ++ + + L +V D S + Q R + + + DP Sbjct: 292 GPHEAEVSVEPLPLSLLRGKGMTALVVVHDISGRRTAERQARLFERVFRNALEGICITDP 351 Query: 155 ERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLL 214 E IV N AFT + GY +A G P LL + + + L + R +DE Sbjct: 352 EGIIVAVNPAFTTITGYPADDAVGQSP-RLLKSHHHDSAFYEDMWRALVEEGRWEDEIWN 410 Query: 215 LTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAA 264 R GE SIS + + V F DITE + + Sbjct: 411 RRRNGEVYPEWLSISAIPGPTGRTEYYVAVFHDITELKAKESQIQHQAHH 460 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 825 bits (2133), Expect = 0.0, Method: Composition-based stats. Identities = 185/702 (26%), Positives = 315/702 (44%), Gaps = 43/702 (6%) Query: 122 VRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPE-----RHIVQCNRAFTEMFGYCISEA 176 A + T++L +D L + N T M G+ ++EA Sbjct: 261 AELVRERAALRTMTQRLEEVLDCSPSVNYTLTRGEEGWVGTWMSHN--LTRMTGFSVAEA 318 Query: 177 SGMQPD-TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL 235 ++ + +R + + + E+ + G WI+ + V D Sbjct: 319 LAQGWWARTVHPDDLERASRAV--RAVEEDGHYVHEYRIRCADGGVRWIRDELRAVRDEG 376 Query: 236 AHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNES 289 + + + DITE+RQ +L A + S+ + ++ + R V S Sbjct: 377 GRVVRVAGVWIDITEQRQATELLRLNSAVIESTHDGVVLTDLDGAIVAVNRAFTEVTGYS 436 Query: 290 HVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQI---KTS 339 + L++G S A ++ A W + R+++G + Sbjct: 437 RDEVVGQNPRFLQSGRHDRGFYLSMWAALKEAGHWQGELWNRRKNGELFPEWLTLNAVRN 496 Query: 340 SGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD 399 + ++ DIS+ +++ ++ L DP+T LPNR + + L+ +D Sbjct: 497 EVGHVTHYVGVFTDISK--------LKQTEDRLDYLAHHDPLTDLPNRLLVLSRLEHALD 548 Query: 400 KAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF 455 A V + +D + V DSLG+A D+ L V R R L+ + L R+ G +F Sbjct: 549 GAQRRGCRVAVMFLDLDRFKTVNDSLGHAAGDELLRAVAARLRGALREEDTLGRLGGDEF 608 Query: 456 VLVSLE-NDVSNITQIADELRNVVSKPIMI-DDKPFPLTLSIGIS--YDLGKNRDYLLST 511 +++ ++ +A L V++ P + + + SIGIS D G + L+ Sbjct: 609 MVLLEHVEAPADAAVVAKNLVEVLAAPFALSNGHEVFIRASIGISFYPDDGDDFMTLVRN 668 Query: 512 AHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGE 571 A AM + G N + F++ + ERL L L+ A+ +++ + YQP + + G Sbjct: 669 ADAAMYRAKAQGRNTYGFYTEDLIRSATERLALETRLRRALEHDEFVVYYQPVLGVKDGR 728 Query: 572 LYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPA 631 L G EAL RW V P+ FIP+AEE G I +G WV+ +ACRQ+ EW Sbjct: 729 LLGAEALVRWKPQGEPMVSPAAFIPVAEETGLIVALGEWVLRDACRQVREWIDAGYAFGQ 788 Query: 632 LSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMG 691 ++VNLSA FR + ++ + G+ QL +EITES ++E ++ L+ G Sbjct: 789 VAVNLSAEQFRRQDVSAMLATVLAETGLPATQLELEITESSLLEAGEHAVGLLERLKQQG 848 Query: 692 VGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTV 751 VGL++DDFGTG+S L+ L + ++KID+SFV + LA+ AI ++ ++L++ V Sbjct: 849 VGLAIDDFGTGYSSLAYLKRFSIDKLKIDRSFVQDIADDSNDLAIASAIVAMARALDMAV 908 Query: 752 VAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIP-GWMS 792 AEGVE + Q E+LR + C QGY S PLPA+E ++ Sbjct: 909 QAEGVEGEAQLELLRGLGCGSYQGYLCSPPLPADEFEARFLR 950 Score = 175 bits (446), Expect = 5e-42, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 86/260 (33%), Gaps = 12/260 (4%) Query: 5 DADNAADGIFFPALEQNMMGAVLINEN---DEVMFFNPAAEKLWGYKREEVIGNNID-ML 60 A L+ + + + + ++ G+ E + Sbjct: 268 AALRTMTQRLEEVLDCSPSVNYTLTRGEEGWVGTWMSHNLTRMTGFSVAEALAQGWWART 327 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYY 118 + D +R E G E ++ DG W R L V EG V Sbjct: 328 VHPDDLERASRAVRAVEEDG-----HYVHEYRIRCADGGVRWIRDELRAVRDEGGRVVRV 382 Query: 119 LALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 + D + + E R ++ V++ D + IV NRAFTE+ GY E G Sbjct: 383 AGVWIDITEQRQATELLRLNSAVIESTHDGVVLTDLDGAIVAVNRAFTEVTGYSRDEVVG 442 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 P L + + L + Q E + GE +++ V + + H+ Sbjct: 443 QNP-RFLQSGRHDRGFYLSMWAALKEAGHWQGELWNRRKNGELFPEWLTLNAVRNEVGHV 501 Query: 239 QNLVMTFSDITEERQIRQLE 258 + V F+DI++ +Q Sbjct: 502 THYVGVFTDISKLKQTEDRL 521 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 42/366 (11%), Positives = 101/366 (27%), Gaps = 43/366 (11%) Query: 1 MKLTDADNAADGIFF--PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNID 58 + +T+ A + + +E G VL + + ++ N A ++ GY R+EV+G N Sbjct: 387 IDITEQRQATELLRLNSAVIESTHDGVVLTDLDGAIVAVNRAFTEVTGYSRDEVVGQNPR 446 Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKV 116 L H + EL +K+G W + Sbjct: 447 FLQSGR----HDRGFYLSMWAALKEAGHWQGELWNRRKNGELFPEWLTLNAVRNEVGHVT 502 Query: 117 YYLALVRDASVEMAQKEQTRQLIIA---------------VDHLDRP---------VIVL 152 +Y+ + D S +++ L ++H V+ L Sbjct: 503 HYVGVFTDISKLKQTEDRLDYLAHHDPLTDLPNRLLVLSRLEHALDGAQRRGCRVAVMFL 562 Query: 153 DPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEF 212 D + N + G + A + L + +L + + Sbjct: 563 DLD-RFKTVNDSLGHAAGDELLRAVAARLRGALREEDTLGRLGGDEFMVLLEHVEAPADA 621 Query: 213 LLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFH 272 ++ + ++ +P H + + + + + ++ Sbjct: 622 AVVAKN----LVEVLAAPFALSNGHEVFIRASI----GISFYPDDGDDFMTLVRNADAAM 673 Query: 273 EMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAG 332 + RN + + + + + + + + +DG G Sbjct: 674 YRAKAQGRNTYGF--YTEDLIRSATERLALETRLRRALEHDEFVVYYQPVLGVKDGRLLG 731 Query: 333 ILQIKT 338 + Sbjct: 732 AEALVR 737 >UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WZ79_METML Length = 1250 Score = 824 bits (2130), Expect = 0.0, Method: Composition-based stats. Identities = 204/841 (24%), Positives = 342/841 (40%), Gaps = 74/841 (8%) Query: 5 DAD-NAADGIFFPALEQNMMGAVLINE-NDEVMFFNPAAEKLWGYKREEVIG--NNIDML 60 +A + L + + V N A EKL G ++ +I L Sbjct: 430 EALIRKTESYLTNILNSVEEVIWTASAPDFRVNHVNAAIEKLCGLSQQALIDDIEVWINL 489 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYY 118 I D ++ E + E ++ DG+ W + V + Sbjct: 490 IHPDDCAQAKLAMKAVFEQSSVAL-----EYRIVLADGTVRWVSDSRHVVYGESGESAEL 544 Query: 119 LALVRDASVEMAQ----KEQTRQLIIAVDHLDRPV-IVLDPERHIVQCNRAFTEMFGYCI 173 + ++ D + + +E ++I ++ V I ++ N+ +TE+ Sbjct: 545 VCVIHDVTAKRLAADADRESKERVIQMLETSPIAVRIATSSGDKVLFANKRYTELINCPP 604 Query: 174 SEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYD 233 G P + L Q+ A + L+ +W AS PV+ Sbjct: 605 DAVMGRNPKLYYA---HAEEYDALLAQVNSGHAINDKLIQLIVEGKGPVWAMASYRPVHY 661 Query: 234 VLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPP----------------FHEMGEI 277 ++ F D+T+ R+ + A S ++ Sbjct: 662 E--GTAAILGWFYDVTDLRRAQDALLLSEALAKQSLEELKYQKYALDKHAIVAVTDVKGR 719 Query: 278 ICRNIESVLNESHVSLFALRNGMPIHWASSSHG--------AEIQNAQSWSATI--RQRD 327 I + S S+ L S H + N Q W I R +D Sbjct: 720 ITYANDKFSEISGYSIEELLGQDHAILNSGYHPKGYFKEMYRTVANGQVWHDEICNRAKD 779 Query: 328 GAPAGI---LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGL 384 G+ + + + ++I DI+Q ++ + L +DP+T L Sbjct: 780 GSLYWVDTTIAPFIGDDGKPQSYISIRTDITQ--------RKAAEDKSNYLALYDPLTNL 831 Query: 385 PNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREK 440 PNR L + L + A+ + + +DH + + D+LG+ D L +V Sbjct: 832 PNRRLLLDRLTHALASAMRTGRGGALLFLDLDHFKTLNDTLGHDVGDLLLQQVAECLTAC 891 Query: 441 LKPDQYLCRIEGTQFVLVSLENDVSNITQIA------DELRNVVSKPIMIDDKPFPLTLS 494 ++ + R+ G +FV++ + A +++ N +P + +T S Sbjct: 892 VREGDTVARLGGDEFVVILEGLSEQEVEAAAQAEVVGEKILNKFIEPYQFKGYEYHITSS 951 Query: 495 IGISYDLGKN---RDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEA 551 +GI+ GKN D LL A AM +K G N FF P M E ++ R+ + L++A Sbjct: 952 VGITLF-GKNNLKSDELLKQADIAMYQAKKLGRNALSFFDPKMQEGIQARVDMEHELRKA 1010 Query: 552 ISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWV 611 + N+ +L YQ Q+ G EAL RW P G +PP+ F+ +AE+ G I +IG WV Sbjct: 1011 LDKNEFQLFYQMQVGLSD-RAVGAEALIRWIHPERGLIPPNEFVSIAEDCGMILSIGAWV 1069 Query: 612 IAEACRQLAEW-RSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITE 670 I AC QL W +S+ LSVN+SA FR QV+ A+ GI+ L +E+TE Sbjct: 1070 IDTACAQLKRWEQSERTRSLTLSVNVSAKQFRQADFVEQVTTAIARHGINPMLLKLELTE 1129 Query: 671 SMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTE 730 S +++H + + L+D+G+ S+DDFGTG+S L L LP+ ++KID+SFV + Sbjct: 1130 SALLDHIEDAVAIMNALKDIGIRFSLDDFGTGYSSLQYLRLLPLYQLKIDRSFVRDIASS 1189 Query: 731 KRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 A++ I ++ +LNL V+AEGVET+ Q +L C QGY FS P+P + Sbjct: 1190 IGNQAIVRTIIAMAHTLNLNVIAEGVETQVQQGILLDSGCMHYQGYLFSEPVPIDAFEAL 1249 Query: 791 M 791 + Sbjct: 1250 L 1250 Score = 98.5 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 48/409 (11%), Positives = 126/409 (30%), Gaps = 42/409 (10%) Query: 4 TDADNAADGIFFPALEQNMMGAVLIN-ENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 + + + + A +G+ ++ E++ ++ ++ + + N + + Sbjct: 302 EQSLHRSKALLVEAQHIAQVGSWSLDWLTGELI-WSEEIYHIFETDQHQF-HANYEAFL- 358 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA--EGKVYYLA 120 + P E + + +L DGS W + Y Sbjct: 359 NAVHPCDREAVDCAFKASVVSHTPYEITHRLLLADGSVKWVHERGTSDYDAAGNPTYSRG 418 Query: 121 LVRDASVEMAQKEQTRQ----LIIAVDHLDRPVIVLD-PERHIVQCNRAFTEMFGYCISE 175 V+D + + R+ L ++ ++ + P+ + N A ++ G Sbjct: 419 TVQDVTERQNSEALIRKTESYLTNILNSVEEVIWTASAPDFRVNHVNAAIEKLCGLSQQA 478 Query: 176 ASG--MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYD 233 L++ + + +++ + E+ ++ G W+ S VY Sbjct: 479 LIDDIEVWINLIHPDD--CAQAKLAMKAVFEQSSVALEYRIVLADGTVRWVSDSRHVVYG 536 Query: 234 VLAHLQNLVMTFSDITEER----QIRQLEGNILAAMCSSPPFHEM--------------- 274 LV D+T +R R+ + ++ + +SP + Sbjct: 537 ESGESAELVCVIHDVTAKRLAADADRESKERVIQMLETSPIAVRIATSSGDKVLFANKRY 596 Query: 275 GEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGIL 334 E+I ++V+ + +A A + G I + + + G + Sbjct: 597 TELINCPPDAVMGRNPKLYYAHAEEYDALLAQVNSGHAINDK-LIQLIVEGK-GPVWAMA 654 Query: 335 QIKTSSGAETSAFIERVADISQHMAALALEQ------EKSRQHIEQLIQ 377 + T+A + D++ A ++S + ++ Sbjct: 655 SYRPVHYEGTAAILGWFYDVTDLRRAQDALLLSEALAKQSLEELKYQKY 703 Score = 82.3 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 31/277 (11%), Positives = 69/277 (24%), Gaps = 29/277 (10%) Query: 127 VEMAQKEQTRQLIIAV----DHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPD 182 ++ + + LD + + +F + + Sbjct: 297 ERTHAEQSLHRSKALLVEAQHIAQVGSWSLDWLTGELIWSEEIYHIFETDQHQF-HANYE 355 Query: 183 TLLN--IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 LN P + + + LL G W+ + YD + Sbjct: 356 AFLNAVHPCDREAVDCAFKASVVSHTPYEITHRLLLADGSVKWVHERGTSDYDAAGNPTY 415 Query: 241 LVMTFSDITEERQIRQLEGNI-----------LAAMCSSPPFHEMGEIICRNIESVLNES 289 T D+TE + L + ++ + IE + S Sbjct: 416 SRGTVQDVTERQNSEALIRKTESYLTNILNSVEEVIWTASAPDFRVNHVNAAIEKLCGLS 475 Query: 290 HVSLFALRNGMPIHWASSSHGAE--------IQNAQSWSATIRQRDGAPAGIL---QIKT 338 +L Q++ + I DG + + Sbjct: 476 QQALIDDIEVWINLIHPDDCAQAKLAMKAVFEQSSVALEYRIVLADGTVRWVSDSRHVVY 535 Query: 339 SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQL 375 E++ + + D++ A ++E + I+ L Sbjct: 536 GESGESAELVCVIHDVTAKRLAADADRESKERVIQML 572 >UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=C7LQR9_DESBD Length = 1262 Score = 824 bits (2130), Expect = 0.0, Method: Composition-based stats. Identities = 200/828 (24%), Positives = 347/828 (41%), Gaps = 48/828 (5%) Query: 5 DADNAADGIFFPALEQNMMGAVLINEND-EVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 DA + A ++ ++ + ++ NP A ++G+ + G I L+P Sbjct: 442 DALHDAVSKTEAIVKSAADAIIVFTTDTLRIISANPGASFIFGHPALRLEGMTIPELLPA 501 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVR 123 P + ++ + E+ + +GS++ +++ S +++ R Sbjct: 502 WGIPGSGDNEASLLHAMRSSNQ---VEVTGRRANGSQVTLEAVITQSSGRQGDFFIGTFR 558 Query: 124 DASVEM----AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 D S ++ ++ + P +Q N A +++G+ Sbjct: 559 DISERKRYENELRKAEENFRGIFENAVEGMFRTTPHGRYLQANPALAKIYGFESPAELMR 618 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWK-TARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 D + A R +LL + E + + G IWI + V D ++ Sbjct: 619 HYDDISRQLYVEAGRREEFIRLLGEKEEIFDFESAIRRKDGSVIWISENARAVKDAAGNV 678 Query: 239 QNLVMTFSDITEERQIRQLEGNIL----AAMCSSPPFHEMGEIICRN------IESVLNE 288 T DIT+ R ++Q + SP + + + R E++ Sbjct: 679 VCYEGTVMDITQRRAMQQALDRQMALFGQLFEDSPLAIALVDTVGRIAQVNGGFETLFGY 738 Query: 289 SHVSLFALRNGMPIHWASS-----SHGAEIQNAQSWSATIRQRD--GAPAGILQI--KTS 339 + N + I S I + ++ +R G + + Sbjct: 739 KRAEILGKDNRLFIVPEEQLSEINSIRQRILDGETVQRETLRRTSRGDIVPVNLLGHPVR 798 Query: 340 SGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD 399 G E + DIS E+++ + I D +TGLPNR+ L V+ Sbjct: 799 IGGEITNIFWIYQDIS--------ERKEFERQITHQAFHDSLTGLPNRSLFRERLGRAVE 850 Query: 400 KAVS-----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQ 454 + LI ++ + V DSLG+ D L+E+ +R + ++ + R+ G + Sbjct: 851 RTKRRPDYHFAAMLIDLNKFKWVNDSLGHQAGDALLVEIASRLKSCVRSVDTVARLGGDE 910 Query: 455 FVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLST 511 F ++ E + +A ++N V + + + K S+GI + +L Sbjct: 911 FAILLEEFRTNKEVISVASRIQNEVRRAFLWNGKEIVSGASVGIVLQTRDCAGAEDILRD 970 Query: 512 AHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGE 571 A AM ++ G F + M + V E + + L+ AI N L+L YQP + G+ Sbjct: 971 ADIAMYKAKERGRGHLVFHNR-MRQEVLEVINMENELRRAIEGNSLELHYQPIFDVDGGK 1029 Query: 572 LYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHI-- 629 L G EAL RW P HG + P RFIPLAEE G I +G+WV+ ACRQL W ++ Sbjct: 1030 LEGFEALVRWRHPEHGMIMPDRFIPLAEESGLIVPLGQWVVNAACRQLKSWDDESGTAEY 1089 Query: 630 -PALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILR 688 +SVNLS F + L + + A+ I +L +EITES ++ ++++ L+ Sbjct: 1090 GLTMSVNLSCKQFAQHTLVDMILRALRENDIAPPRLKLEITESAIILDPAAAAEKLRRLK 1149 Query: 689 DMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLN 748 ++GV L+VDDFGTG+S LS L P+ +KID+SF+ T K ++ +I + SL Sbjct: 1150 EIGVLLAVDDFGTGYSSLSYLRQFPMDILKIDRSFISGTDTPKENAEIVRSIVDMAHSLG 1209 Query: 749 LTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLP 796 L V AEGVET+EQ E L+ I+C QGY FS+P+ + + + Sbjct: 1210 LRVTAEGVETQEQLERLQSINCDRAQGYMFSKPMAPGDAGDMIRQAVS 1257 Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 54/290 (18%), Positives = 101/290 (34%), Gaps = 14/290 (4%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGY-KREEVIGNNIDMLIP 62 + A+ F E + G + + NPA K++G+ E++ + D + Sbjct: 567 ENELRKAEENFRGIFENAVEGMFRTTPHGRYLQANPALAKIYGFESPAELM-RHYDDI-- 623 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA--EGKVYYLA 120 + E E + +KDGS IW V V Y Sbjct: 624 SRQLYVEAGRREEFIRLLGEKEEIFDFESAIRRKDGSVIWISENARAVKDAAGNVVCYEG 683 Query: 121 LVRDASVEMAQKEQTRQLII----AVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 V D + A ++ + + + + ++D I Q N F +FGY +E Sbjct: 684 TVMDITQRRAMQQALDRQMALFGQLFEDSPLAIALVDTVGRIAQVNGGFETLFGYKRAEI 743 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 G + L +PE ++Q + Q E L T G+ + + PV + Sbjct: 744 LGK-DNRLFIVPEEQLSEINSIRQRILDGETVQRETLRRTSRGDIVPVNLLGHPVR-IGG 801 Query: 237 HLQNLVMTFSDITEERQIRQLEGN--ILAAMCSSPPFHEMGEIICRNIES 284 + N+ + DI+E ++ + + ++ P E + R +E Sbjct: 802 EITNIFWIYQDISERKEFERQITHQAFHDSLTGLPNRSLFRERLGRAVER 851 Score = 86.2 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 45/362 (12%), Positives = 110/362 (30%), Gaps = 29/362 (8%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 + A + +F E + + L++ + N E L+GYKR E++G + + I Sbjct: 694 MQQALDRQMALFGQLFEDSPLAIALVDTVGRIAQVNGGFETLFGYKRAEILGKDNRLFIV 753 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV-YYLAL 121 + + + IR G E + RE G + V G++ + Sbjct: 754 PEEQLSEINSIRQRILDG----ETVQRETLRRTSRGDIVPVNLLGHPVRIGGEITNIFWI 809 Query: 122 VRDASVEMAQKEQ--TRQLIIAVDHLDRPVIVLDPERHIVQCNRA-----FTEMFGYCIS 174 +D S + Q + ++ L + + V+ + F M Sbjct: 810 YQDISERKEFERQITHQAFHDSLTGLPNRSLFRERLGRAVERTKRRPDYHFAAML----- 864 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 + + + A + + ++ + + + G++ I + Sbjct: 865 -IDLNKFKWVNDSLGHQAGDALLVEIASRLKSCVRSVDTVARLGGDEFAILL---EEFRT 920 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLF 294 + ++ + R N + + + C E +L ++ ++++ Sbjct: 921 NKEVISVASRIQN----EVRRAFLWNGKEIVSGASVGIVLQTRDCAGAEDILRDADIAMY 976 Query: 295 ALRNGMPIHW-ASSSHGAEIQNAQSWSATIRQR---DGAPAGILQIKTSSGAETSAFIER 350 + H + E+ + +R+ + I G + F Sbjct: 977 KAKERGRGHLVFHNRMRQEVLEVINMENELRRAIEGNSLELHYQPIFDVDGGKLEGFEAL 1036 Query: 351 VA 352 V Sbjct: 1037 VR 1038 >UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XRM5_DESMR Length = 821 Score = 824 bits (2130), Expect = 0.0, Method: Composition-based stats. Identities = 202/821 (24%), Positives = 351/821 (42%), Gaps = 55/821 (6%) Query: 3 LTDADNA-ADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 +TD+ A + ++ E + A++ + + V+ N + E L+G EV+G ++ ++ Sbjct: 1 MTDSSAALPEDVYRRIFESSPNAALVRDASGVVLAVNASFEALFGLDAAEVVGRDLRQVV 60 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI---WTRFALSKVSAEGKVYY 118 SR + DG + +F +V +GK Sbjct: 61 RPADDGETAGGDWSL------GGAAFSRRTRWTAGDGVTVDACPCQFPAGQV--DGKPVS 112 Query: 119 LALVRDASVEMAQKEQT----RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS 174 + RD S +EQ R+ ++ + P ++ NR ++G+ Sbjct: 113 CVIFRDISGRRRAEEQLDAAERKYRAIFENAVEGIFQTTPGGRYLEVNRTLARIYGFDSV 172 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQ-DEFLLLTRTGEKIWIKASISPVYD 233 + + N R + L + + E + + G IWI + V D Sbjct: 173 DEMTEHFRDIKNQLYVEPKRRDDFVRELSAHDQVRNFESAIHKKDGSVIWISENARVVRD 232 Query: 234 VLAHLQNLVMTFSDITEERQIRQLEGNIL----AAMCSSPPFHEMGEI------ICRNIE 283 + T DIT+ ++ + +SP + ++ + E Sbjct: 233 ADGAVAYYEGTVVDITDRKRAEEQLAAQRAYFDQLFANSPQAIALIDMRRNIVDVNHAFE 292 Query: 284 SVLNESHVSLFA------LRNGMPIHWASSSHGAEIQNAQSWSATIR-QRDGAPAGILQI 336 + + + + S+ GA + T R RDG + I Sbjct: 293 DLFGFKAAEIKGYGMRAYIVPKHLLGECESTRGAILSGKPMVRETFRQHRDGRLIPVSMI 352 Query: 337 KTSS--GAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYL 394 G + + DIS E++ + I D +TGLPNR+ + L Sbjct: 353 GFPIEFGGQPQGIVYIYQDIS--------ERKAFEEQITHQAFHDALTGLPNRSLFADRL 404 Query: 395 DDLVDKAVS-----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCR 449 D + +A V +I ++ + + D+LG+ DQ L+EV R ++ + R Sbjct: 405 DRALTRARRRGDYQYAVLMIDLNKFKGINDTLGHQAGDQLLVEVSRRLMACVRSMDTVAR 464 Query: 450 IEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRD 506 + G +F ++ E + + D + + KP M+ S+GI ++ + Sbjct: 465 LGGDEFAVILEELKSKKEVMAVVDRIGAALGKPCMLCGTTVTPGASVGIVLRTRDYQSPE 524 Query: 507 YLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIF 566 +L A AM +++G F M++ + + + L A L+ A+ +L L YQP + Sbjct: 525 DILRDADIAMYRAKESGRPSM-IFDRRMHQEILDAINLEADLRAALDRGELLLHYQPIVD 583 Query: 567 AETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ- 625 +TG + G EAL RW P G VPP +FIPLAEE G I+ +GR+VIAEACRQL W+ + Sbjct: 584 VQTGRIEGFEALVRWDHPDRGLVPPVQFIPLAEETGLIQPLGRFVIAEACRQLRAWQLEL 643 Query: 626 -NIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRI 684 ++SVN+S F L + V+ + G+D L +EITES++M + Sbjct: 644 PEAEQLSVSVNVSCHQFVKEGLVDHVAGVLETTGLDPACLKLEITESVLMHDAQHTAGEL 703 Query: 685 QILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIG 744 L+ +GV +++DDFGTG+S LS L LP+ +KID+SF+ ++++I ++ Sbjct: 704 SRLKALGVKIAIDDFGTGYSSLSYLRQLPIDHLKIDRSFISGDDVNGESQEIVKSIIALA 763 Query: 745 QSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAE 785 +SL LTV+AEGVE ++Q + LR C QG+ FSRP+ + Sbjct: 764 RSLGLTVIAEGVEHQDQLDKLRNADCDKAQGFMFSRPVDKD 804 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 91/267 (34%), Gaps = 10/267 (3%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + + +AA+ + E + G + N +++G+ + + + + Sbjct: 124 RAEEQLDAAERKYRAIFENAVEGIFQTTPGGRYLEVNRTLARIYGFDSVDEMTEHFRDIK 183 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWT--RFALSKVSAEGKVYYL 119 + +V E + KKDGS IW + + + YY Sbjct: 184 NQLYVEPKRRDDFVRELSAHDQVRNF--ESAIHKKDGSVIWISENARVVRDADGAVAYYE 241 Query: 120 ALVRDASVEMAQKEQTRQLIIAVD----HLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 V D + +EQ D + + + ++D R+IV N AF ++FG+ +E Sbjct: 242 GTVVDITDRKRAEEQLAAQRAYFDQLFANSPQAIALIDMRRNIVDVNHAFEDLFGFKAAE 301 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL 235 G + + +L ++ F R G I + P+ + Sbjct: 302 IKGYGMRAYIVPKHLLGECESTRGAILSGKPMVRETFR-QHRDGRLIPVSMIGFPI-EFG 359 Query: 236 AHLQNLVMTFSDITEERQIRQLEGNIL 262 Q +V + DI+E + + + Sbjct: 360 GQPQGIVYIYQDISERKAFEEQITHQA 386 Score = 88.1 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 59/168 (35%), Gaps = 13/168 (7%) Query: 1 MKLTDADNAADGI------FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIG 54 + +TD A + + F + LI+ ++ N A E L+G+K E+ G Sbjct: 245 VDITDRKRAEEQLAAQRAYFDQLFANSPQAIALIDMRRNIVDVNHAFEDLFGFKAAEIKG 304 Query: 55 NNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEG 114 + I P H + G + M RE + +DG I + G Sbjct: 305 YGMRAYI----VPKHLLGECESTRGAILSGKPMVRETFRQHRDGRLIPVSMIGFPIEFGG 360 Query: 115 KV-YYLALVRDASVEMAQKEQ--TRQLIIAVDHLDRPVIVLDPERHIV 159 + + + +D S A +EQ + A+ L + D + Sbjct: 361 QPQGIVYIYQDISERKAFEEQITHQAFHDALTGLPNRSLFADRLDRAL 408 >UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ51_9DELT Length = 751 Score = 823 bits (2126), Expect = 0.0, Method: Composition-based stats. Identities = 198/720 (27%), Positives = 312/720 (43%), Gaps = 39/720 (5%) Query: 102 WTRFALSKVSAEGKVYYLAL------VRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPE 155 W + +L+ + +Y+A+ E + + + + + +D Sbjct: 39 WDQESLTAMQTYKGWFYVAVTAILVFFLVLRAEYRFRRTEERFRNLTETSNDWIWEVDTS 98 Query: 156 RHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLL 215 + + GY E G P + E + A L Sbjct: 99 GSYTYVSPQVKTLLGYRPDEVIGRTPFDFMPSGEAERVRDRFAAISAEQEAIINLVNTNL 158 Query: 216 TRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMG 275 R G ++ ++ S P YD Q DIT +Q+ + + + Sbjct: 159 HRQGRRVILETSGVPFYDQHGTWQGYRGIDRDITVRQQLEEWLRQSAMVYENMWEGAVIT 218 Query: 276 EI------ICRNIESVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI- 323 + + + + + L++ E+ W I Sbjct: 219 DPAGTILDVNPAFSRITGYAKDEVIGKNPRILKSDRHEQAFYQHMWRELIEKGQWRGEIW 278 Query: 324 -RQRDGAPAGIL---QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFD 379 R+++G + + +TS ++ D+SQ ++S +E L +D Sbjct: 279 NRRKNGEVYPEWLSISGVSDARGQTSYYVGVFTDLSQ--------LKQSEAKLESLAYYD 330 Query: 380 PMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVN 435 P+T LPNR LH+ L+ ++ A VY I +D + V +SL Y DQ L+ V Sbjct: 331 PLTALPNRLLLHSRLEHALEWAERHQTKVGVYFIDLDQFRVVNESLSYQAGDQLLVMVSK 390 Query: 436 RFREKLKPDQYLCRIEGTQFVLVSL-ENDVSNITQIADELRNVVSKPIMIDD-KPFPLTL 493 RF L+ D L R G +FVL+ D T+ A EL + +P +D + L Sbjct: 391 RFLSCLRVDDTLARPGGDEFVLIQEALADPQEATETARELLASLDQPFQLDGGQEIYLGA 450 Query: 494 SIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEA 551 SIGI+ G LL A AM + ++NG N + F++ MN RL + AL++A Sbjct: 451 SIGITVFPGDGTTPPDLLKNAEAAMYHAKENGRNRFSFYAEQMNADALARLQMEMALRQA 510 Query: 552 ISNNQLKLVYQPQIFAETG-ELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRW 610 + N +L L YQPQ + G EAL RW + + P +FIPLAE+ G I IG W Sbjct: 511 VENRELLLYYQPQWQLADSPSVIGAEALIRWRNKEGELIAPDQFIPLAEKSGLIGAIGDW 570 Query: 611 VIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITE 670 VI EACRQL WR Q ++VN+SA FR+ L V+ A+ I H +E+TE Sbjct: 571 VIDEACRQLRIWRDQGKKQLRVAVNVSARQFRAGNLAEVVAQALRKHEIPAHCFELELTE 630 Query: 671 SMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTE 730 S++ME E + + +GVG+++DDFGTG+S L+ L P+T +KID+SFV Sbjct: 631 SILMEKPEEAAELLNRCAALGVGIALDDFGTGYSSLAYLSRFPITVLKIDRSFVRDLNHR 690 Query: 731 KRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 + ++I ++ + L VVAEGVET+EQ L+ C + QG+ FS PLPAE+ + Sbjct: 691 SEAALIADSIIALAHRMGLQVVAEGVETEEQRAYLQSRGCDLAQGFLFSPPLPAEQFAEF 750 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 88/242 (36%), Gaps = 6/242 (2%) Query: 19 EQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNRE 78 E + ++ + + +P + L GY+ +EVIG +P + Sbjct: 86 ETSNDWIWEVDTSGSYTYVSPQVKTLLGYRPDEVIGRTPFDFMPSGEAERVRDRFAAISA 145 Query: 79 GGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRDASVEMAQKEQTR 136 +A + ++ + G ++ + + Y + RD +V +E R Sbjct: 146 EQEAIINLVN---TNLHRQGRRVILETSGVPFYDQHGTWQGYRGIDRDITVRQQLEEWLR 202 Query: 137 QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRI 196 Q + +++ ++ DP I+ N AF+ + GY E G P +L Sbjct: 203 QSAMVYENMWEGAVITDPAGTILDVNPAFSRITGYAKDEVIGKNP-RILKSDRHEQAFYQ 261 Query: 197 RLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQ 256 + + L + + + E + GE SIS V D V F+D+++ +Q Sbjct: 262 HMWRELIEKGQWRGEIWNRRKNGEVYPEWLSISGVSDARGQTSYYVGVFTDLSQLKQSEA 321 Query: 257 LE 258 Sbjct: 322 KL 323 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 55/162 (33%), Gaps = 11/162 (6%) Query: 7 DNAADGIFFP---ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 + E GAV+ + ++ NPA ++ GY ++EVIG N +L Sbjct: 194 RQQLEEWLRQSAMVYENMWEGAVITDPAGTILDVNPAFSRITGYAKDEVIGKNPRILKSD 253 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYLAL 121 A +++ E+ +K+G W + + YY+ + Sbjct: 254 RHEQAFYQHMWREL----IEKGQWRGEIWNRRKNGEVYPEWLSISGVSDARGQTSYYVGV 309 Query: 122 VRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIVQC 161 D S + + L + L +++ H ++ Sbjct: 310 FTDLSQLKQSEAKLESLAYYDPLTALPNRLLLHSRLEHALEW 351 >UniRef50_Q47HF3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q47HF3_DECAR Length = 994 Score = 822 bits (2125), Expect = 0.0, Method: Composition-based stats. Identities = 195/768 (25%), Positives = 336/768 (43%), Gaps = 38/768 (4%) Query: 56 NIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK 115 + + D + IR ++ MS + + + R A ++ + Sbjct: 98 PVIFVTALDDQSEEERGIREGAADYVSKPVKMSVLIARIRA---HLEVRRAQWLLANQKA 154 Query: 116 VYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 + R + +A++ + DP R+ + + +M GY Sbjct: 155 WLEQEVERRIAENTQLDRHL---TLALERSGFGIWEHDPVRNRNRWSEGLRQMLGYEQEP 211 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV-YDV 234 + L++ + PA L + + EF + G W+++ V +D Sbjct: 212 EQLAESMNLIHPEDRPAVEAQVTASLRDRNSILIGEFRIRHHDGGWRWVESRGRIVEFDE 271 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNILAAMC---SSPPFHEMGEIICRNIESVLNESHV 291 ++ T DITE + + I R ++ + Sbjct: 272 AGQPTLMIGTMLDITERKLAEAEHRLADLVFTGIGEGICITDAKRNILRINDAFSTITGY 331 Query: 292 SLFALRNGMPIHWASSSH--------GAEIQNAQSWSATI--RQRDGAPAGIL---QIKT 338 + P S H I +W I R +DG+ Sbjct: 332 QADEIVGQNPRLLKSGVHSPAFYAEIWKTIDQYGNWQGEITNRHKDGSLVTEWLSISSLR 391 Query: 339 SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV 398 + S +I +D+S E++ + + I+ L +D +T LPNR+ + L+ + Sbjct: 392 DTTGTASHYIGIFSDLS--------ERQAAAERIQYLSSYDTLTELPNRHLFDDRLNQAL 443 Query: 399 DKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQ 454 A + L+ ++ + + D+LG D+ L+EV R + +++ + R G + Sbjct: 444 LTARRFERGTALILLDLNRFRLINDTLGPPAGDEILVEVTRRLKLQVREGDTVGRRAGNE 503 Query: 455 FV-LVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLST 511 F +++ + + +A + + +S P + + +T SIGIS G+N + +L + Sbjct: 504 FGFVMANLSHERDALALAQRMLDAISVPFSVAGQSVAITASIGISVFPKNGENGEAMLRS 563 Query: 512 AHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGE 571 A A+ +++G N + F+SP M+ RL + +AL++A++ ++ + YQPQ+ ++G Sbjct: 564 ADAALLRAKQSGRNTFSFYSPEMDADAARRLSIESALRDALARDEFCVHYQPQVSLDSGH 623 Query: 572 LYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPA 631 + G+EAL RW+ L G + P FIP+AEE G I IG WV+ AC Q W + Sbjct: 624 MIGMEALLRWNSALLGPISPVEFIPIAEETGLIMQIGDWVLRTACHQTKAWLDLGLLPLH 683 Query: 632 LSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMG 691 ++VNLS FR LP QV+ A+ G+ L +EITES ++ + L+ +G Sbjct: 684 VAVNLSPRQFRQADLPAQVAHALAESGLPAGALELEITESAFIDDIDDAVAMCSKLKSLG 743 Query: 692 VGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTV 751 + LS+DDFGTG+S L+ + P +IKID+SFV + A+ A +G+SLNL+V Sbjct: 744 IKLSLDDFGTGYSSLAYVSRFPFDKIKIDQSFVRDIVNNPVNAAIASAAIVMGRSLNLSV 803 Query: 752 VAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI 799 +AEGVET+ Q LR C IQGY FSRPLP EE + S PL I Sbjct: 804 LAEGVETEAQAAFLRSRRCDAIQGYLFSRPLPPEEFAPLLLSCKPLPI 851 Score = 165 bits (419), Expect = 6e-39, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 100/277 (36%), Gaps = 11/277 (3%) Query: 11 DGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKRE-EVIGNNIDMLIPRDLRPAH 69 D ALE++ G + ++ ++ GY++E E + +++ LI + RPA Sbjct: 171 DRHLTLALERSGFGIWEHDPVRNRNRWSEGLRQMLGYEQEPEQLAESMN-LIHPEDRPAV 229 Query: 70 PEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV---SAEGKVYYLALVRDAS 126 + R + E ++ DG W V A + + D + Sbjct: 230 EA---QVTASLRDRNSILIGEFRIRHHDGGWRWVESRGRIVEFDEAGQPTLMIGTMLDIT 286 Query: 127 VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 + + R + + + + D +R+I++ N AF+ + GY E G P LL Sbjct: 287 ERKLAEAEHRLADLVFTGIGEGICITDAKRNILRINDAFSTITGYQADEIVGQNP-RLLK 345 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 + + + + Q E + G + SIS + D + + FS Sbjct: 346 SGVHSPAFYAEIWKTIDQYGNWQGEITNRHKDGSLVTEWLSISSLRDTTGTASHYIGIFS 405 Query: 247 DITEERQIRQLEG--NILAAMCSSPPFHEMGEIICRN 281 D++E + + + + P H + + + Sbjct: 406 DLSERQAAAERIQYLSSYDTLTELPNRHLFDDRLNQA 442 Score = 107 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 50/334 (14%), Positives = 105/334 (31%), Gaps = 25/334 (7%) Query: 1 MKLTDA-DNAADGIFFP-ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNID 58 + +T+ A+ G + + ++ N A + GY+ +E++G N Sbjct: 283 LDITERKLAEAEHRLADLVFTGIGEGICITDAKRNILRINDAFSTITGYQADEIVGQNPR 342 Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKV 116 +L PA I + + E+ KDGS + W + + + Sbjct: 343 LLKSGVHSPAFYAEIWKTID----QYGNWQGEITNRHKDGSLVTEWLSISSLRDTTGTAS 398 Query: 117 YYLALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS 174 +Y+ + D S A E+ + L + L + D + R F Sbjct: 399 HYIGIFSDLSERQAAAERIQYLSSYDTLTELPNRHLFDDRLNQALLTARRFERGTALI-- 456 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLLWK--TARDQDEFLLLTRTGEKIWIKASISPVY 232 + L+N P L ++ + + + + E ++ A++S Sbjct: 457 -LLDLNRFRLINDTLGPPAGDEILVEVTRRLKLQVREGDTVGRRAGNEFGFVMANLSHER 515 Query: 233 DVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVS 292 D LA Q ++ S + ++ + N E++L + + Sbjct: 516 DALALAQRMLDAIS--------VPFSVAGQSVAITASIGISVFPKNGENGEAMLRSADAA 567 Query: 293 LFA--LRNGMPIHWASSSHGAEIQNAQSWSATIR 324 L + S A+ S + +R Sbjct: 568 LLRAKQSGRNTFSFYSPEMDADAARRLSIESALR 601 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 821 bits (2123), Expect = 0.0, Method: Composition-based stats. Identities = 195/729 (26%), Positives = 339/729 (46%), Gaps = 48/729 (6%) Query: 103 TRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCN 162 ++S + L + +VE A + +QL +D V V+D + + N Sbjct: 304 VALSISALIGFQGYQREQLAKARAVEQALLDARQQLNDIIDFFPDAVFVIDRNKRVTIWN 363 Query: 163 RAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTR----- 217 RA +M G E G +IP + L L A ++ + R Sbjct: 364 RAIEKMSGVPKEEMLGKGDHE-YSIPFYGQRRTQLLDLLDLDDAELAAKYSNIRRVGEVL 422 Query: 218 ----------TGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCS 267 G+ ++ A+ P+Y+ + DI++ +Q + + + Sbjct: 423 DAETFCPALHDGKGAYVWATGVPLYNAAGERIGAIEAIRDISDRKQSELFLKKLTHGIEN 482 Query: 268 S---PPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSS--------HGAEIQNA 316 S + +I + + + SL P S + I + Sbjct: 483 SASAVVITDTQGVIEYVNKKFIQLTGFSLEEAVGKNPRILKSEATPPEVFVDLWKTILSG 542 Query: 317 QSWSATI--RQRDGAPAGILQIK---TSSGAETSAFIERVADISQHMAALALEQEKSRQH 371 + W + R+++G + + E + FI V DI E++ + Sbjct: 543 REWRGELLNRRKNGEVYWSITSISPLRNDSGEITHFIANVEDI--------NERKNAEAT 594 Query: 372 IEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWAD 427 IE L FDP+T LPNR L + L+ + ++ + + +D + V DS+G+ D Sbjct: 595 IEHLAYFDPLTDLPNRRMLQDRLELALRRSRRHGSNVALMYLDLDSFKHVNDSMGHPAGD 654 Query: 428 QALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVS-NITQIADELRNVVSKPIMIDD 486 L E+ RF ++ D +CR+ G +F L+ + ++ IA +L V++P+ +D Sbjct: 655 LLLKEMAGRFSGVVRDDDVVCRLGGDEFALILHDIHQDQDVVPIAQKLIEAVAQPVPLDG 714 Query: 487 KPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVL 544 + +T SIGI+ G + L A A+ + ++ G N ++F+ +N + R+ L Sbjct: 715 REVVVTASIGIALFPRDGGDVKNLEKHADIALYHAKEEGKNTFRFYLEELNSTISTRIAL 774 Query: 545 GAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEI 604 L+ A +L+L YQP++ +G++ G+EAL RWH P G V P RFIPLAE+ I Sbjct: 775 EQGLRYAKERQELELHYQPKVCVASGKVSGVEALLRWHSPDFGLVSPIRFIPLAEQTRLI 834 Query: 605 ENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQL 664 IG WV+ AC Q +WR Q + + ++VNLSA+ +S L +V+ + GI L Sbjct: 835 IPIGEWVLRTACLQQVQWREQGL-LLNMAVNLSAIQLKSPGLVERVAAIIDETGIQPEHL 893 Query: 665 TVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFV 724 +E+TES ++ + E+ + ++ LR +G +S+DDFGTG+S LS L S PVT +KID+SFV Sbjct: 894 ELELTESALVNNPDEVVQLLERLRTLGCSISIDDFGTGYSSLSYLKSFPVTILKIDRSFV 953 Query: 725 DRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPA 784 A+ ++ + +L++ VAEGVE++EQ +L++I C IQG+ +SRP+ A Sbjct: 954 RDLAHNSGDRAIARSVVDLANNLDMKTVAEGVESEEQLTILQQIGCTYIQGFIYSRPVQA 1013 Query: 785 EEIPGWMSS 793 +++ + Sbjct: 1014 DQVSAVVRR 1022 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 60/393 (15%), Positives = 134/393 (34%), Gaps = 40/393 (10%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 + A A ++ +I+ N V +N A EK+ G +EE++G Sbjct: 328 VEQALLDARQQLNDIIDFFPDAVFVIDRNKRVTIWNRAIEKMSGVPKEEMLGKGD----H 383 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKK---------------DGSKIWTRFAL 107 P + + + ++ + ++ DG + Sbjct: 384 EYSIPFYGQRRTQLLDLLDLDDAELAAKYSNIRRVGEVLDAETFCPALHDGKGAYVWATG 443 Query: 108 SKVS--AEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAF 165 + A ++ + +RD S + ++L +++ V++ D + I N+ F Sbjct: 444 VPLYNAAGERIGAIEAIRDISDRKQSELFLKKLTHGIENSASAVVITDTQGVIEYVNKKF 503 Query: 166 TEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIK 225 ++ G+ + EA G P +L P + + L + + + E L + GE W Sbjct: 504 IQLTGFSLEEAVGKNP-RILKSEATPPEVFVDLWKTILSGREWRGELLNRRKNGEVYWSI 562 Query: 226 ASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNI-----LAAMCSSPPFHEMGEIICR 280 SISP+ + + + + DI E + ++ L + + + E+ R Sbjct: 563 TSISPLRNDSGEITHFIANVEDINERKNAEATIEHLAYFDPLTDLPNRRMLQDRLELALR 622 Query: 281 NIESVLNESHVSLFALRNGMPIHWASSSHGAEI---QNAQSWSATIRQRDGAPAGILQIK 337 + + L + ++ + ++ + A +S +R D + Sbjct: 623 RSRRHGSNVALMYLDLDSFKHVNDSMGHPAGDLLLKEMAGRFSGVVRDDD--------VV 674 Query: 338 TSSGAETSAFIERVADISQHMAALALEQEKSRQ 370 G + F + DI Q + + Q+ Sbjct: 675 CRLGGD--EFALILHDIHQDQDVVPIAQKLIEA 705 >UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SP12_9RHIZ Length = 894 Score = 820 bits (2120), Expect = 0.0, Method: Composition-based stats. Identities = 219/858 (25%), Positives = 380/858 (44%), Gaps = 74/858 (8%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVI-GNNIDMLIPR 63 + A F ++ G L + + ++ NP +++ E ++ G + ++ Sbjct: 41 QSLEAQALRFATVIDNISQGICLFDPEERLILSNPRYSEIYRVPPERLVPGITLREIVVH 100 Query: 64 DLRPAHPE-YIRHNREGGKARVEG-MSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLAL 121 + + ++ G +SR + DG + + G +++ Sbjct: 101 RVAAGTSAMSVDEYLALARSVNSGAISRTWAADLADGRT--VQVYHHPMPDGG---WVST 155 Query: 122 VRDASVEMAQKEQTRQ---LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY-CISEAS 177 D + +A ++ + L +D + + V D E + NRA G + Sbjct: 156 HEDVTELIATRQIVDERISLQTLIDWVPDYLWVKDSESRFIVANRALAADSGRETTRDMI 215 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTAR-DQDEFLLLTRTGEKIWIKASISPVYDVLA 236 G+ L + PE + R +L +E ++ R+G W+ ++ P+ + Sbjct: 216 GLTDFDL-HAPELASKFRADELSVLQTGQPMIDEEEFVVDRSGAGKWLSSTKVPLRNDRN 274 Query: 237 HLQNLVMTFSDITEERQ---IRQLEGNILAAMCSSPPFHEMGEIICRNIE-SVLNESHVS 292 + LV DIT ++ +R + IL + + P ++ + + R +E + Sbjct: 275 DVFGLVGIAHDITGRKREDMLRTGQAEILEMIATGAPLDDVLDRLMRLMESQLTGILGSV 334 Query: 293 L---------------------FALRNGMPIHWASSSHGAEIQNAQ-------------- 317 L +G+ I S G + + Sbjct: 335 LLLDKEGRHLRHGAAPSLAEGYINAIDGVAIGPKVGSCGTAVFRREPVVVADIMRDPLWD 394 Query: 318 -------------SWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALE 364 WS I GA G+ + + + E + R+ + + +A +A+E Sbjct: 395 DYRDLAERYGYRSCWSTPIVSHQGAVLGVFAMYSMTVREPAEAETRLINFTTRIAGIAIE 454 Query: 365 QEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDS 420 ++K+ I + D +TGLPNR L + L + A V I +D+ + + D+ Sbjct: 455 RKKAEDQIHFMANHDVLTGLPNRALLQDRLSQAILHAQRYDRWVSVVFIDLDNFKLINDT 514 Query: 421 LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN--DVSNITQIADELRNVV 478 LG+ D+ L V R + + R+ G +FVLV + +V I + +LR + Sbjct: 515 LGHNAGDRLLKTVAERMVGCISSTDTIVRLGGDEFVLVLSDQPKNVDLIAETLQKLRTAI 574 Query: 479 SKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNE 536 ++P+ + D T SIGI+ GK + L++ A AM + G + +QF++P N Sbjct: 575 AEPLQLGDHCVRATASIGIATYPKDGKAPESLVANADAAMYRAKAVGRDNFQFYAPEFNT 634 Query: 537 MVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIP 596 ER +L L+ A++ +Q +L YQPQI + ++ +EAL RW+ P HG + P FIP Sbjct: 635 RAHERFLLQEELRTALARSQFELFYQPQIDLRSVQIVAVEALIRWNHPAHGAMAPVGFIP 694 Query: 597 LAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHA 656 AEE G I IG WV+ EACRQ W+ + +SVN+SA F L +V A+ Sbjct: 695 TAEETGLIVPIGDWVLHEACRQNKAWQDLGLEPITVSVNVSARQFSEKNLVERVVHALSE 754 Query: 657 WGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTE 716 ++G L +E+TES++M+ + L+ +GV +S+DDFGTG+S LS L + P+ Sbjct: 755 SDLEGCYLELELTESLIMQDVGLAVTTMNKLQSLGVQISIDDFGTGYSSLSALKTFPIAR 814 Query: 717 IKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGY 776 +KIDKSF+D T + A+ A+ S+GQ L + V+AEGVET EQ LRK +C +QGY Sbjct: 815 LKIDKSFIDDVATNEDDQAVASAVISLGQKLKMRVIAEGVETDEQVAFLRKNNCDEMQGY 874 Query: 777 FFSRPLPAEEIPGWMSSV 794 FS+P+ + EI + S Sbjct: 875 HFSKPVCSREIERLLESR 892 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 820 bits (2120), Expect = 0.0, Method: Composition-based stats. Identities = 182/713 (25%), Positives = 321/713 (45%), Gaps = 39/713 (5%) Query: 116 VYYLALVRDASVE-MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY--C 172 ++ + + + ++ + L A D ++ + ++ + G Sbjct: 566 AQWVGWEKYRAQQLKQLEQIHQDLENAQSVAKIGSWHWDMQKDNLHWSKELVRLLGLEGD 625 Query: 173 ISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLL---TRTGEKIWIKASIS 229 S AS L++ + NR + + +D+ E ++GE + I A Sbjct: 626 TSHASYSTYLELIHPDDRAKINRQM--AAVTRGMQDRFEADHRIICHKSGELLHIHALGI 683 Query: 230 PVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIE 283 D +V T D+T + + ++ + + + + Sbjct: 684 VSRDSRGVPSQMVGTLQDVTRRKMAEEGLVLAKMIFDNAGEAIVITDAQGDITDVNPAYQ 743 Query: 284 SVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG---I 333 ++ + + L++G E+ + W I R++ G Sbjct: 744 RIMGYTRDEIVGQNPSILKSGRHDEQFYEQMWNEMLSEGHWQGEIWDRRKSGEIFPKWLT 803 Query: 334 LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNY 393 + S F+ DI+Q Q+++ + +E+L +DP+T LPNR + Sbjct: 804 IDAIRDEQGVISNFVGLFMDITQ--------QKETEEQLEKLAYYDPLTELPNRALFRDR 855 Query: 394 LDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCR 449 L+ + + ++ I +D + V DSLG+ D L++V R + L+ + R Sbjct: 856 LEQEMRLSARGGKSLGLFFIDLDRFKYVNDSLGHDKGDDLLIQVAGRIKHHLRTSDTVAR 915 Query: 450 IEGTQFVLVSL-ENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRD 506 + G +F ++ +++ +IA + + + ++ + SIGI+ D G++ + Sbjct: 916 LGGDEFTVILPGIEQTNDVARIAGAIVKSLGEVFVLQGHEVFIGGSIGIAMHPDDGEDYE 975 Query: 507 YLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIF 566 L A AM ++ G ++FF+ MNE+ RL L AL++A+ NQL L YQP++ Sbjct: 976 TLTKHADTAMYRAKEEGRGTYKFFTSDMNEINGRRLSLERALRQAVECNQLTLHYQPKVD 1035 Query: 567 AETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN 626 + + G+EAL RW+ P G V P FIP+AEE G I IG WV+ +AC + Sbjct: 1036 VKQCRITGMEALVRWNHPEQGLVSPVDFIPIAEETGLIITIGEWVMQQACMDAKRLARSS 1095 Query: 627 IHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQI 686 H +++NLSA F+ L ++ ++ G+ L VEITES+ M ++I Sbjct: 1096 RHPLQVAINLSAKQFQDALLVAKLERSLQQSGLAPELLEVEITESLAMGDVNRTIEQIGE 1155 Query: 687 LRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQS 746 LR +GV +S+DDFGTG+S LS L LP+ +KIDKSF+ + A++ +I S+ + Sbjct: 1156 LRALGVKVSIDDFGTGYSSLSYLKKLPLNALKIDKSFIQDLYLDSDDTAIVSSILSMASA 1215 Query: 747 LNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI 799 L L+VVAEGVE + Q L + C IQGYFFS+PLP E ++ P+K+ Sbjct: 1216 LGLSVVAEGVENQAQIHFLCEKECPTIQGYFFSKPLPFEAFEKFLLDWDPVKM 1268 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 86/265 (32%), Gaps = 12/265 (4%) Query: 4 TDADNAADGIFFPALEQNM----MGAVLINENDEVMFFNPAAEKLWGY--KREEVIGNNI 57 + I LE +G+ + + + ++ +L G + Sbjct: 576 AQQLKQLEQIHQD-LENAQSVAKIGSWHWDMQKDNLHWSKELVRLLGLEGDTSHASYSTY 634 Query: 58 DMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRF--ALSKVSAEGK 115 LI D R + G + R E R + K G + +S+ S Sbjct: 635 LELIHPDDRAKINRQMAAVTRGMQDRFEADHR--IICHKSGELLHIHALGIVSRDSRGVP 692 Query: 116 VYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 + ++D + +E + D+ +++ D + I N A+ + GY E Sbjct: 693 SQMVGTLQDVTRRKMAEEGLVLAKMIFDNAGEAIVITDAQGDITDVNPAYQRIMGYTRDE 752 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL 235 G P +L ++ + Q E ++GE +I + D Sbjct: 753 IVGQNPS-ILKSGRHDEQFYEQMWNEMLSEGHWQGEIWDRRKSGEIFPKWLTIDAIRDEQ 811 Query: 236 AHLQNLVMTFSDITEERQIRQLEGN 260 + N V F DIT++++ + Sbjct: 812 GVISNFVGLFMDITQQKETEEQLEK 836 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 61/176 (34%), Gaps = 10/176 (5%) Query: 2 KLTDADNAADGIFFP--ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDM 59 +T A +G+ + V+ + ++ NPA +++ GY R+E++G N + Sbjct: 701 DVTRRKMAEEGLVLAKMIFDNAGEAIVITDAQGDITDVNPAYQRIMGYTRDEIVGQNPSI 760 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVY-- 117 L E + + E+ +K G + + E V Sbjct: 761 LKSGRHDEQFYEQMWNEMLSE----GHWQGEIWDRRKSGEIFPKWLTIDAIRDEQGVISN 816 Query: 118 YLALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIVQCNRAFTEMFGY 171 ++ L D + + +EQ +L + L + D ++ + + G Sbjct: 817 FVGLFMDITQQKETEEQLEKLAYYDPLTELPNRALFRDRLEQEMRLSARGGKSLGL 872 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 819 bits (2116), Expect = 0.0, Method: Composition-based stats. Identities = 192/711 (27%), Positives = 320/711 (45%), Gaps = 37/711 (5%) Query: 114 GKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPE--RHIVQCNRAFTEMFGY 171 Y L ++ A + +D + P + + +GY Sbjct: 380 DVTYALDMLLQAKERANALIALQNAAEVIDASPTILFRWQPNSSWKMEYVSSNVQR-WGY 438 Query: 172 CISEASG--MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASIS 229 + + LL+ + + + + E + T GE +W++ ++ Sbjct: 439 QADDFINGKLTMSDLLHPEDLQRVWAEVIHHIETRHKEYILECRVRTAAGEYLWVENHVT 498 Query: 230 PVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIE 283 +D Q +DIT+++ S+ + + + R + Sbjct: 499 TSFDRKGKPQRFTGVMTDITQQKNNELQLRQAAIVFESTREGIVITDAERNIIKVNRALI 558 Query: 284 SVLNESHVSLFAL-----RNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQI 336 + L +G + W + R+++G ++ Sbjct: 559 DLFGYPENELLGQRPRIFHSGKHDGHFYQQMLQALDEHGFWRGEMWNRRQNGELLPMMTS 618 Query: 337 KT---SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNY 393 S E +I DISQ + S +E + DP+TGLPNR L Sbjct: 619 INPVCDSNGEILYYISIYTDISQ--------LKDSEARLEHMALHDPLTGLPNRAMLGQK 670 Query: 394 LDDLVDKA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCR 449 LD + A + ++ +DH ++V DS G+ + D+ L +V R +++L+ +CR Sbjct: 671 LDSALQHAMLNSTRVALLMLDLDHFKNVNDSFGHHFGDELLHQVSARLKQQLRESDVVCR 730 Query: 450 IEGTQFVLVSLEN-DVSNITQIADELRNVVSKPIMIDD-KPFPLTLSIGISYD--LGKNR 505 + G +F ++ N +++ +A+ + + + +P ++ + + + SIGIS G Sbjct: 731 LGGDEFTVLLQNNPSPDDVSLLAERIIHALHQPFLLSNAREVMIGTSIGISLYPEHGSTA 790 Query: 506 DYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQI 565 + L+ A AM + +G +G+++FS + K RL L L AI+ + K+ YQPQI Sbjct: 791 EELMQQADTAMYRAKHDGRDGYRYFSEELFLKAKARLELEQRLHRAITGQEFKVFYQPQI 850 Query: 566 FAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ 625 +T ++ G EAL RW DP +G +PPS FI +AEE G I+NIG WV+ E CRQ +W Q Sbjct: 851 SIKTNQIIGAEALLRWDDPEYGLIPPSEFISVAEETGLIQNIGEWVLYETCRQGRDWLDQ 910 Query: 626 NIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQ 685 ++ L+VNLS L + + +H G H L +E+TES +ME E K +Q Sbjct: 911 HLPPINLAVNLSPLQLHHGDVRQLIGTILHNSGFPAHHLELELTESALMEQQEETVKILQ 970 Query: 686 ILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQ 745 LR G+ +++DDFGTG+S L+ L P+ +KIDK FV+ E+ + + I ++G Sbjct: 971 GLRQQGIRIAIDDFGTGYSSLAYLKQFPLDVLKIDKRFVEDIPHERDDMEIAATIVAMGH 1030 Query: 746 SLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLP 796 SL LTV+AEGVETK Q E L + C QGY +S PLPAEE +S P Sbjct: 1031 SLRLTVLAEGVETKAQLEFLEQQGCDYYQGYLYSMPLPAEEFAQLLSQQNP 1081 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 103/252 (40%), Gaps = 11/252 (4%) Query: 17 ALEQNMMGAVLI--NENDEVMFFNPAAEKLWGYKREEVI-GN-NIDMLIPRDLRPAHPEY 72 ++ + N + ++ + + ++ WGY+ ++ I G + L+ + Sbjct: 407 VIDASPTILFRWQPNSSWKMEYVSSNVQR-WGYQADDFINGKLTMSDLLHPEDLQRVWAE 465 Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSKIWTR--FALSKVSAEGKVYYLALVRDASVEMA 130 + H+ E R + E ++ G +W S + ++ D + + Sbjct: 466 VIHHIET---RHKEYILECRVRTAAGEYLWVENHVTTSFDRKGKPQRFTGVMTDITQQKN 522 Query: 131 QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEF 190 + Q RQ I + +++ D ER+I++ NRA ++FGY +E G +P + + + Sbjct: 523 NELQLRQAAIVFESTREGIVITDAERNIIKVNRALIDLFGYPENELLGQRP-RIFHSGKH 581 Query: 191 PADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITE 250 ++ Q L + + E + GE + + SI+PV D + + ++DI++ Sbjct: 582 DGHFYQQMLQALDEHGFWRGEMWNRRQNGELLPMMTSINPVCDSNGEILYYISIYTDISQ 641 Query: 251 ERQIRQLEGNIL 262 + ++ Sbjct: 642 LKDSEARLEHMA 653 Score = 74.3 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 35/267 (13%), Positives = 77/267 (28%), Gaps = 18/267 (6%) Query: 100 KIWTRFALSKVSAEGKVYYLALVR------DASVEMAQKEQTRQLIIAVDHLDRPVIVL- 152 W V++L + R ++ E+ R L D + + Sbjct: 50 TFWVSLTTFITGITVGVFFLLVWRQHYMQHRQALSRRVAEKDRLLHHFFDLPLLGMAITT 109 Query: 153 DPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEF 212 + ++ N + +F E + + L + + P D + ++ ++ + E Sbjct: 110 NANGSWLRFNDHLSTLFNLSRDELAELNLLALTHPDDRPYDRQEWMRMQDGESQGYRREK 169 Query: 213 LLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIR----------QLEGNIL 262 + G ++ + + ++ DI+ + + Sbjct: 170 RFVRPDGSMLFALVDTRCIRHPDGSIDCMINVIEDISARKNSELRLIRQNNLYDMLSLTN 229 Query: 263 AAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQN-AQSWSA 321 A+ S + + ICR + A H AS H + + Sbjct: 230 QAIVRSQDRLVLLQNICRIAVRNGGFVFAWVSATEQEHSSHVASYGHDNGFLQFIRDYQQ 289 Query: 322 TIRQRDGAPAGILQIKTSSGAETSAFI 348 R G+ A +L + A S I Sbjct: 290 QHRLSAGSHAPVLMPTDRAIAAESHVI 316 Score = 71.6 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 47/459 (10%), Positives = 108/459 (23%), Gaps = 95/459 (20%) Query: 1 MKLTDAD----NAADGIFFPALEQNMMGAVLI-NENDEVMFFNPAAEKLWGYKREEVIGN 55 M+ A D + + ++G + N N + FN L+ R+E+ Sbjct: 77 MQHRQALSRRVAEKDRLLHHFFDLPLLGMAITTNANGSWLRFNDHLSTLFNLSRDELAEL 136 Query: 56 NIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK 115 N+ L D RP + +G RE + + DGS ++ + Sbjct: 137 NLLALTHPDDRPYDR---QEWMRMQDGESQGYRREKRFVRPDGSMLFALVDTRCIRHPDG 193 Query: 116 --VYYLALVRDASVEMAQKEQTRQLIIAVDH----------LDRPVIVLD-------PER 156 + ++ D S + + + D +++L Sbjct: 194 SIDCMINVIEDISARKNSELRLIRQNNLYDMLSLTNQAIVRSQDRLVLLQNICRIAVRNG 253 Query: 157 HIVQCNRAFTE---------------MFGYCISEASGMQPDTLLNIPEFPADNRIR---- 197 V + TE + + + P +R Sbjct: 254 GFVFAWVSATEQEHSSHVASYGHDNGFLQFIRDYQQQHRLSAGSHAPVLMPTDRAIAAES 313 Query: 198 ---------------LQQLLWKTARDQDEFLLLTRTGEKIWI-------------KASIS 229 + + + ++ G+ I + + Sbjct: 314 HVILNHFLTDESVQPFHEAATRAGFQSAGYFVIREKGQVIGALNLYADEPDFFSPEVRAT 373 Query: 230 PVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMG-------------- 275 + D++ + + E N + +SP Sbjct: 374 -LNDMVMDVTYALDMLLQAKERANALIALQNAAEVIDASPTILFRWQPNSSWKMEYVSSN 432 Query: 276 -EIICRNIESVLN--ESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAG 332 + + +N + L + + H +R G Sbjct: 433 VQRWGYQADDFINGKLTMSDLLHPEDLQRVWAEVIHHIETRHKEYILECRVRTAAGEYLW 492 Query: 333 IL---QIKTSSGAETSAFIERVADISQHMAALALEQEKS 368 + + F + DI+Q ++ + Sbjct: 493 VENHVTTSFDRKGKPQRFTGVMTDITQQKNNELQLRQAA 531 >UniRef50_C5SCB7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SCB7_CHRVI Length = 811 Score = 819 bits (2116), Expect = 0.0, Method: Composition-based stats. Identities = 209/810 (25%), Positives = 364/810 (44%), Gaps = 49/810 (6%) Query: 15 FPALEQNMMGAVLIN-ENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 +++ + L++ + ++ N AAE+L G R ++G ++ L PE + Sbjct: 9 QALIDELIDAVWLVDGSDQRLLAVNRAAEELLGQGRASLVGRSMSEL------ACTPEDL 62 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS-AEGKVYYLALVRDASVEMAQK 132 + R + + E L ++DG+ + + +VS +G+ YLA + S A + Sbjct: 63 FFWEDVAAGRGDTLLSETLLRRQDGTLVTVLRRVGRVSCPDGRCLYLACFSNQSERRAVE 122 Query: 133 EQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP---DTLL 185 + +L ++ ++V D + I N+ F E++ + + + Sbjct: 123 SELEKLVAELRATLESSADGILVTDLDGAIRSFNQRFAELWRLPAALLTERNDAGIHDWM 182 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 A+ Q + + + LL R G + ++ V F Sbjct: 183 VREVLDAEGYAARLQAIAQNPLLEASDLLTLRQGR---VLERVTLPQYARGRPIGRVYAF 239 Query: 246 SDITEERQIRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNESHVSLFALR-N 298 DIT+ Q +S + + + E + + L R + Sbjct: 240 RDITQRLHDEQGLKLAARVFEASLDAIFVTDPEFRIVAVNPAGERMTGLAGAELVGQRLD 299 Query: 299 GMPIHWASSSHG----AEIQNAQSWSATI--RQRDGAPAGILQI---KTSSGAETSAFIE 349 WA+ + A + + W I DG+ L + ++ Sbjct: 300 RSLRLWANETLDPDIRAALDRSGHWQGEIEQHHADGSTFPCLVSLMRVLDTEGLPFHYVG 359 Query: 350 RVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PV 405 V D+S+ + ++RQ IEQL D +TGLPNR L L+ ++ A Sbjct: 360 FVKDLSETV--------EARQRIEQLAFNDALTGLPNRLRLTERLEFSIELARRENTRFA 411 Query: 406 VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVS 465 V I +D + + DSLG+ + D+ L+EV R R+ L+ + R+ G +FVL+ + Sbjct: 412 VLFIDIDRFKHINDSLGHVFGDRVLIEVAQRIRQCLRHVDTIARLGGDEFVLLLHRVESH 471 Query: 466 NITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNG 523 +A L +++P +D F L+ SIGI+ G+ D L+ A +AM +++++G Sbjct: 472 GAELVARRLLESMAQPFELDGLKFSLSCSIGIALYPEDGETLDDLIKNADSAMYHVKEHG 531 Query: 524 GNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHD 583 F+ MN + ER+ + A++EA+ L YQPQI +G + G EAL RW+D Sbjct: 532 RGDCCFYQRQMNVGLLERVRIDHAMREALQQGHFWLAYQPQIDLVSGLVIGAEALVRWND 591 Query: 584 PLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRS 643 P G + P RFIP+AEE G I +G WV+ EA RQ A W++Q I +LSVN+SA F Sbjct: 592 PDLGELAPGRFIPIAEETGFIVALGGWVLREAIRQGAHWQAQGIR-LSLSVNVSATQFHQ 650 Query: 644 NQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGF 703 + ++ + G+ +L +E+TES+++++ E +R++ L +GV L++DDFGTG+ Sbjct: 651 ANFIDLLAQWLDETGLPPGRLELELTESILIQNVEETLRRLENLVALGVRLAIDDFGTGY 710 Query: 704 SGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFE 763 S L+ L P+ ++KID+SFV ++ A+ A+ + L L V+AEGVET Q + Sbjct: 711 SSLAYLKRFPIHKLKIDRSFVCDIPHDESDTAIATAVIGLASVLKLRVIAEGVETDIQRQ 770 Query: 764 MLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 L C QGY + L ++ Sbjct: 771 FLLDAGCHEFQGYLCAPALEPAAFLARIAQ 800 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 80/247 (32%), Gaps = 2/247 (0%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 LE + G ++ + + + FN +LW + N + +R Sbjct: 132 LRATLESSADGILVTDLDGAIRSFNQRFAELWRLPAALLTERNDAGIHDWMVREVLDAEG 191 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKE 133 R A+ + L + G + R L + + + + RD + + ++ Sbjct: 192 YAARLQAIAQNPLLEASDLLTLRQGRVL-ERVTLPQYARGRPIGRVYAFRDITQRLHDEQ 250 Query: 134 QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPAD 193 + + + V DPE IV N A M G +E G + D L + Sbjct: 251 GLKLAARVFEASLDAIFVTDPEFRIVAVNPAGERMTGLAGAELVGQRLDRSLRL-WANET 309 Query: 194 NRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQ 253 ++ L ++ Q E G S+ V D + V D++E + Sbjct: 310 LDPDIRAALDRSGHWQGEIEQHHADGSTFPCLVSLMRVLDTEGLPFHYVGFVKDLSETVE 369 Query: 254 IRQLEGN 260 RQ Sbjct: 370 ARQRIEQ 376 >UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCZ6_METSD Length = 869 Score = 818 bits (2114), Expect = 0.0, Method: Composition-based stats. Identities = 196/811 (24%), Positives = 340/811 (41%), Gaps = 49/811 (6%) Query: 13 IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR---DLRPAH 69 + +L + +++ N A +++GY R+++ + L+P D R Sbjct: 76 RYNSLTVHANDSILLFDHQGKLVDANDRALRMYGYTRDQMQHIHARQLLPDAASDWRSCF 135 Query: 70 PEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEM 129 +HN G+ E + + DGS + + G Y A+VRD + + Sbjct: 136 LAEAQHN---------GIIFESEHKHADGSTFSVEVSACLLKIGGSDYIQAIVRDITERL 186 Query: 130 AQKEQTRQLIIAVDH----LDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 E+ R+ + H D E I R + G + + Sbjct: 187 RVVEKLRESEQLLAHMSAIAHIGGWEFDVETGIGSWTREVAHIHGVEFKDNISAEFGLGF 246 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 E +QQ + E L+T G + W++ +P + + L +F Sbjct: 247 YEAESREKIEAAIQQAIDHGKPYDLELELVTARGIRKWVRTVCTPHI-IDGRVLKLQGSF 305 Query: 246 SDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESHVSLFA---- 295 DI++ + +S + + + + + + Sbjct: 306 QDISDRKVAEDKMRLATLVFENSSEAIMVVDAESQILSVNPAFTEMTGYTAQEVVGKTPK 365 Query: 296 -LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQIKT---SSGAETSAFIE 349 L +G + + W + R+++G + E + Sbjct: 366 ILASGKQDRKFYEEMWHLLDSNGKWQGEVWNRRKNGESYAEWLTIDTIYNEHGEVIRRVA 425 Query: 350 RVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PV 405 +DI+++ +++++ I + FD +TGLPNR LH+ L+ + KA Sbjct: 426 LFSDITKN--------KQNQEVIWRQANFDQLTGLPNRRMLHDRLNQEILKADRNHQMLA 477 Query: 406 VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVS 465 V + +D ++V D+ G+ DQ L E +R ++ + R+ G +FV++ Sbjct: 478 VLFLDLDRFKEVNDTYGHLMGDQLLQESAHRLLHSVRECDTVARLGGDEFVVILSGLQDK 537 Query: 466 NITQ-IADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKN 522 ++ Q IA + P +D+ +++SIGI+ G + L A AM + N Sbjct: 538 DVVQDIAQSILKKFDTPFQLDNDLTHVSVSIGITIYPEDGNAGEVLFKNADQAMYVAKNN 597 Query: 523 GGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWH 582 G N + +F+ +M + R+ L L A+ Q +L YQP + TG+++ EAL RW Sbjct: 598 GRNRYSYFTASMQAHAQNRMRLSNDLHLALPGQQFELYYQPIVELATGQVHKAEALLRWQ 657 Query: 583 DPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFR 642 P G +PP FIPLAEE G I +IG WV EA RQ+ +S + +S+N S + F Sbjct: 658 HPTRGMIPPDNFIPLAEETGLIVDIGNWVFYEAARQVKRLQSLHHASFQISINKSPVQFH 717 Query: 643 SN-QLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGT 701 + + + + VEITE ++M D I ++ RD GV +++DDFGT Sbjct: 718 NETHGHEAWISFLLMNDLPRQSIVVEITEGLLMHTDESISAQLLGFRDAGVQVALDDFGT 777 Query: 702 GFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQ 761 G+S LS L + +KID+ FV +AL EAI + L++ V+AEG+ET+EQ Sbjct: 778 GYSSLSYLKKFDIDYLKIDRIFVRNLSRNSSDMALCEAIVMMAHKLDIKVIAEGIETEEQ 837 Query: 762 FEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 E+L++I C QGY FS PLPA ++ Sbjct: 838 RELLQQIGCDFGQGYLFSPPLPAPAFEAYLR 868 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 52/287 (18%), Positives = 99/287 (34%), Gaps = 6/287 (2%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 +++ + ++ + +G + + + + G E N Sbjct: 186 LRVVEKLRESEQLLAHMSAIAHIGGWEFDVETGIGSWTREVAHIHGV---EFKDNISAEF 242 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL- 119 E I + + EL+L G + W R + +G+V L Sbjct: 243 GLGFYEAESREKIEAAIQQAIDHGKPYDLELELVTARGIRKWVRTVCTPHIIDGRVLKLQ 302 Query: 120 ALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 +D S +++ R + ++ ++V+D E I+ N AFTEM GY E G Sbjct: 303 GSFQDISDRKVAEDKMRLATLVFENSSEAIMVVDAESQILSVNPAFTEMTGYTAQEVVGK 362 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 P +L + + LL + Q E + GE +I +Y+ + Sbjct: 363 TP-KILASGKQDRKFYEEMWHLLDSNGKWQGEVWNRRKNGESYAEWLTIDTIYNEHGEVI 421 Query: 240 NLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVL 286 V FSDIT+ +Q +++ A + R + +L Sbjct: 422 RRVALFSDITKNKQNQEVI-WRQANFDQLTGLPNRRMLHDRLNQEIL 467 Score = 85.0 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 32/300 (10%), Positives = 78/300 (26%), Gaps = 36/300 (12%) Query: 100 KIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQT--RQLIIAVDHLDRPVIVLDPERH 157 + +++ + ++ L + ++Q + H + +++ D + Sbjct: 37 LLPEAASITHFQTLKGLLFILLTAALLYHLIHRQQLLASRYNSLTVHANDSILLFDHQGK 96 Query: 158 IVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTR 217 +V N M+GY + + LL P+ +D R E Sbjct: 97 LVDANDRALRMYGYTRDQMQHIHARQLL--PDAASDWRSCFLAEAQHNGII-FESEHKHA 153 Query: 218 TGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI 277 G ++ S + + + DITE ++ + + +G Sbjct: 154 DGSTFSVEVSACLLK--IGGSDYIQAIVRDITERLRVVEKLRESEQLLAHMSAIAHIGGW 211 Query: 278 -------ICRNIESVLNESHVSL---------FALRNGMPIHWASSSHGAEIQNAQSW-- 319 I V + V ++ I + + + Sbjct: 212 EFDVETGIGSWTREVAHIHGVEFKDNISAEFGLGFYEAESREKIEAAIQQAIDHGKPYDL 271 Query: 320 SATIRQRDGAPAGILQIKTSS--GAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQ 377 + G + + T DIS +++ + + L Sbjct: 272 ELELVTARGIRKWVRTVCTPHIIDGRVLKLQGSFQDIS--------DRKVAEDKMR-LAT 322 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 818 bits (2114), Expect = 0.0, Method: Composition-based stats. Identities = 201/821 (24%), Positives = 340/821 (41%), Gaps = 45/821 (5%) Query: 11 DGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI-PRDLRPAH 69 D F + A+L + + V+ N A E L+G + EV+G ++ ++ P RP Sbjct: 14 DDAFRRVFLCSPNAALLRDADGTVLAANAAFEALFGVEIPEVVGLDLREVLRPVSSRPGR 73 Query: 70 PEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA-EGKVYYLALVRDASVE 128 + + E R RE + +G R + V + L RD + Sbjct: 74 ADRPDEDGEVWSLRGAAFLRETRWAAGEGDAADVRVSQFPVGMLGDRPITCMLFRDIASR 133 Query: 129 MAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 + +++ R + ++ + P ++ NR ++G+ + Sbjct: 134 LLAEDRLRDAERKYRSIFENAVEGIFQTTPAGRYLEVNRTLARIYGFESVAEMREFFRDI 193 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQ-DEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVM 243 N R + L + + E + + G IWI + V Sbjct: 194 RNQLYVDPRRRDDFVRELAAHDQVRDFESEIRKKDGTVIWISENARVVRGADGLPAYYEG 253 Query: 244 TFSDITEERQIRQLEGNILAAM-------CSSPPFHEMGEII---CRNIESVLNESHVSL 293 T DIT+ ++ A + +M I + E++ + Sbjct: 254 TVVDITDRKRAEAALATQRAYFTQLFANSPQAIALIDMHRNIVDANKAFEALFGYRTADI 313 Query: 294 FA------LRNGMPIHWASSSHGAEIQNAQSWSATIRQR-DGAPAGILQI--KTSSGAET 344 + + + A + T+R+ DG + I ET Sbjct: 314 QGFGMRAFIVPEHLLSECENMRCAVLAGKPVVRETVRRHCDGRLIPVSMIGFPIEIAGET 373 Query: 345 SAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS- 403 + DIS E++ + I D +TGLPNR+ + L+ + +A Sbjct: 374 QGIVYIYQDIS--------ERKAFEEQITHQAFHDALTGLPNRSLFADRLERALTRARRR 425 Query: 404 ----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVS 459 V +I ++ + V D+LG+ DQ L+EV R ++ + R+ G +F ++ Sbjct: 426 GDSQYAVLMIDLNKFKGVNDTLGHQAGDQLLVEVARRLSGCVRSMDTVARLGGDEFAVIL 485 Query: 460 LE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAM 516 E + + + + + KP ++ K SIGI D LL A AM Sbjct: 486 EEFKTKKEVMTVVERIGVGLGKPFVLCGKTVTPEASIGIVLHTRDYAAADDLLRDADIAM 545 Query: 517 DYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIE 576 ++ G F M++ + E + L L++A+ +L L YQP + + + G E Sbjct: 546 YRAKEQGRASM-IFDRKMHQEILEAISLETDLRQALEAGELLLHYQPIVDVKDSRIVGFE 604 Query: 577 ALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ--NIHIPALSV 634 AL RW P G VPP +FIPLAEE G I +GR+VI EACRQL W+ + ++SV Sbjct: 605 ALVRWDHPDRGLVPPGQFIPLAEETGLILPLGRFVIDEACRQLRAWQLEMPEAADLSVSV 664 Query: 635 NLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGL 694 N+S F + L V+ + A G+ L +EITES++M + + L+ +GV + Sbjct: 665 NVSCRQFVKDGLVEHVAQVLAATGLPPACLKLEITESVLMHDAEHTARELNRLKALGVKI 724 Query: 695 SVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAE 754 ++DDFGTG+S LS L LP+ +KID+SF+ + ++++I S+ +SL LTV+AE Sbjct: 725 AIDDFGTGYSSLSYLRQLPIDHLKIDRSFISGQGCDGESQEIVKSIISLARSLGLTVIAE 784 Query: 755 GVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 GVE +Q + LR C QG+ FSRP+ A + Sbjct: 785 GVECPDQLDRLRLADCDKAQGFMFSRPVEATAAGRLIRQHP 825 Score = 148 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 52/372 (13%), Positives = 118/372 (31%), Gaps = 18/372 (4%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGY-KREEVIGNNIDMLIP 62 D A+ + E + G + N +++G+ E+ D+ Sbjct: 137 EDRLRDAERKYRSIFENAVEGIFQTTPAGRYLEVNRTLARIYGFESVAEMREFFRDIRNQ 196 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWT--RFALSKVSAEGKVYYLA 120 + P + + E ++ KKDG+ IW + + + YY Sbjct: 197 LYVDPRRRDDFVRELAAHDQVRD---FESEIRKKDGTVIWISENARVVRGADGLPAYYEG 253 Query: 121 LVRDASVEMAQKEQTRQLII----AVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 V D + + + + + ++D R+IV N+AF +FGY ++ Sbjct: 254 TVVDITDRKRAEAALATQRAYFTQLFANSPQAIALIDMHRNIVDANKAFEALFGYRTADI 313 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 G + ++ ++ + E + G I + P+ ++ Sbjct: 314 QGFGMRAFIVPEHLLSE-CENMRCAVLAGKPVVRETVRRHCDGRLIPVSMIGFPI-EIAG 371 Query: 237 HLQNLVMTFSDITEERQIRQLEGN--ILAAMCSSPPFHEMGEIICRNIESVLNESHVSLF 294 Q +V + DI+E + + + A+ P + + R + S + Sbjct: 372 ETQGIVYIYQDISERKAFEEQITHQAFHDALTGLPNRSLFADRLERALTR-ARRRGDSQY 430 Query: 295 ALRNGMPIHWASSSHGAEIQNAQSWSATI-RQRDGAPAGILQIKTSSGAETSAFIERVAD 353 A+ + + Q + R+ G + + G E + +E Sbjct: 431 AVLMIDLNKFKGVNDTLGHQAGDQLLVEVARRLSGCVRSMDTVARLGGDEFAVILEEFK- 489 Query: 354 ISQHMAALALEQ 365 ++ +E+ Sbjct: 490 -TKKEVMTVVER 500 Score = 88.1 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 55/161 (34%), Gaps = 7/161 (4%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + A F + LI+ + ++ N A E L+GY+ ++ G + I Sbjct: 263 RAEAALATQRAYFTQLFANSPQAIALIDMHRNIVDANKAFEALFGYRTADIQGFGMRAFI 322 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK-VYYLA 120 + + E +R GK V RE DG I + G+ + Sbjct: 323 VPEHLLSECENMRCAVLAGKPVV----RETVRRHCDGRLIPVSMIGFPIEIAGETQGIVY 378 Query: 121 LVRDASVEMAQKEQ--TRQLIIAVDHLDRPVIVLDPERHIV 159 + +D S A +EQ + A+ L + D + Sbjct: 379 IYQDISERKAFEEQITHQAFHDALTGLPNRSLFADRLERAL 419 >UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Arthrospira RepID=B5VXY3_SPIMA Length = 1092 Score = 817 bits (2111), Expect = 0.0, Method: Composition-based stats. Identities = 185/808 (22%), Positives = 350/808 (43%), Gaps = 72/808 (8%) Query: 24 GAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNRE---GG 80 G+ +N N M + + G + + L H E + + Sbjct: 317 GSWCLNMNTGEMIVSEQLYHILGLTP-----QPTSINFEQLLNQIHVEDLYGWVQNYATS 371 Query: 81 KARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYYLALVRDA----------SVE 128 + S ++ + D S W + V + ++ ++ + E Sbjct: 372 LFVKQNYSLNYRIIQPDSSVHWVSQESTPVSDRHGQVTHIISTIKAIENPEIVNPSITAE 431 Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 A +E +L + ++V++ + + N A +FG S+ G L+ IP Sbjct: 432 AALRESEARLRTIISTSTNGLVVVNRKGRALFINPAAEALFGRPASQLEG----ELIGIP 487 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 + E +L + G+ ++ + + + + +D+ Sbjct: 488 LVTKE---------------STELEILRQDGQLKIVRMRVVEI--SWEQETAYLASLTDV 530 Query: 249 TEERQIRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNESHVSLFA-----LR 297 T+ ++ A SP + + + E + + L+ Sbjct: 531 TDFKKTEDQLKMFSRACDQSPVSIVITDSEGDIQYVNPKFEEITGYKAGEVIGQNPRILK 590 Query: 298 NGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQIK---TSSGAETSAFIERVA 352 +G +I + + WS ++++G + FI Sbjct: 591 SGYTTEPEYDVLWRQITSGKQWSGEFHNKKKNGELFWEHASICPMRDEEGYITHFIAVKE 650 Query: 353 DISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV----SPVVYL 408 DI+Q Q+ + + + +D +T LPNR + + L + +A + V Sbjct: 651 DITQ--------QKHNEEILAHQANYDALTDLPNRTLIFDRLRQAITEAQVHHSNVAVMF 702 Query: 409 IGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL-ENDVSNI 467 I +DH +++ D+LG+ D L E R R ++ + R+ G +F+L+ +D+ Sbjct: 703 IDLDHFKNINDTLGHELGDFLLKEAGMRLRGCIRKTDTVGRLGGDEFLLIIPKLDDLVQA 762 Query: 468 TQIADELRNVVSKPIMIDDKPFPLTLSIGIS--YDLGKNRDYLLSTAHNAMDYIRKNGGN 525 IA+++ +V+ +P + + ++ SIGI+ GKN L+ A AM ++ G N Sbjct: 763 EYIANQVLDVLGEPFNLCGEEAFISASIGIASYPQDGKNVSTLVRNADTAMYAAKQEGRN 822 Query: 526 GWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPL 585 + FF+ MN+ + R+++ L+ AIS N+L +VYQP I T ++ G EAL RW++P Sbjct: 823 VFAFFTQNMNDEAQSRIIIENQLRHAISRNELSVVYQPFIHLNTSQIVGAEALMRWYNPE 882 Query: 586 HGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQ 645 G++ P +FI +AEE I ++G W++++AC+++A W Q + ++VN+S R+ Sbjct: 883 LGNIRPDQFIAIAEESRLIVDLGEWILSQACQEVANWHQQGNNGLWVAVNMSPRQLRTPN 942 Query: 646 LPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSG 705 L N + +A+ G+ L +EITE ++E + I+ L + + L++DDFGTG+S Sbjct: 943 LVNVIIEAIANNGLSSDCLELEITERSLVEEVPGVQSLIKQLNHLKIRLAIDDFGTGYSS 1002 Query: 706 LSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEML 765 LS L P + +KIDKSF+ ++ +AL++ + ++ L L VVAEG+ET Q + L Sbjct: 1003 LSYLKRFPFSVLKIDKSFISDLPDDQDAIALVKTMITMAHGLGLVVVAEGIETTAQLDFL 1062 Query: 766 RKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 C QGY FS+PLP + ++ Sbjct: 1063 CNQGCDYGQGYLFSKPLPPAQFRAYLQR 1090 Score = 84.7 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 45/380 (11%), Positives = 115/380 (30%), Gaps = 47/380 (12%) Query: 13 IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEY 72 L + ++N+ +++F N A + + IP +L E Sbjct: 190 QMERILNAINLPIFILNQEHKIIFANRKAHETLVVNSQ----------IPPELETWLRER 239 Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLALVRDASVEMA 130 + + + KD W L + ++ +A+ D + Sbjct: 240 SPQIADTNISEIVAEIP----ITKDNITEWFCLRLYPIDSQDGSDFRAIAICEDITDSKL 295 Query: 131 QKEQTRQLIIAVDH----LDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 + ++ + + L+ + + + G + + + + LLN Sbjct: 296 KAQRQQLQQQHLAQVQALTKTGSWCLNMNTGEMIVSEQLYHILGLTP-QPTSINFEQLLN 354 Query: 187 IPEFPA--DNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 L+ + ++ W+ +PV D + +++ T Sbjct: 355 QIHVEDLYGWVQNYATSLFVKQNYSLNYRIIQPDSSVHWVSQESTPVSDRHGQVTHIIST 414 Query: 245 FS----------DITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLF 294 IT E +R+ E + + +S + R +N + +LF Sbjct: 415 IKAIENPEIVNPSITAEAALRESEARLRTIISTSTNGLVVVNRKGRA--LFINPAAEALF 472 Query: 295 ALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGI-LQIKTSSGAETSAFIERVAD 353 G + +S I ++DG + +++ S + +A++ + D Sbjct: 473 G---RPASQLEGELIGIPLVTKESTELEILRQDGQLKIVRMRVVEISWEQETAYLASLTD 529 Query: 354 ISQHMAALALEQEKSRQHIE 373 ++ +K+ ++ Sbjct: 530 VTDF--------KKTEDQLK 541 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 817 bits (2111), Expect = 0.0, Method: Composition-based stats. Identities = 189/715 (26%), Positives = 316/715 (44%), Gaps = 45/715 (6%) Query: 116 VYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCN------------R 163 + + V+ + + V+D E ++V CN + Sbjct: 62 TAMVLFFLLRNAIKRALYGEALFRKVVETIPTGIWVVDREGNVVDCNFAAHGLLQEFGIQ 121 Query: 164 AFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIW 223 A+ ++ GY +E G + P P D + L +++ + G + Sbjct: 122 AYNDIQGY--AEIQG--WWSDNGQPVHP-DEWGISRSLSRGETCLREKIDIACTDGVRRT 176 Query: 224 IKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICR--- 280 + + P+ + + DITE+R+ ++ ++ + R Sbjct: 177 VLYTSLPLKSENGAITGAMALVQDITEKRKTDEVLRRFRFSIEQASEAIFWINDEGRFLF 236 Query: 281 ---NIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNA------QSWSATIRQRDGAPA 331 L S L +L + AE Q + +++DG Sbjct: 237 VNDQACHSLGYSASELESLHLWDIDPDFPAERWAEQWERMKSDPKQVFETRHQRKDGRIF 296 Query: 332 GILQIKTS-SGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNL 390 + + + V DI+ ++K + +E D +TGL NR L Sbjct: 297 PVEVSASQCLFNNEENHVAFVRDITI--------RKKYEKELEHQSNHDALTGLANRVLL 348 Query: 391 HNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQY 446 + + + A V+L+ +D + + DSLG++ D LL V R + P Sbjct: 349 DDRIQQAIVHAERAQRNTAVFLLDLDRFKVINDSLGHSQGDAVLLAVAERLSACISPGDT 408 Query: 447 LCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGK 503 L R+ G +F +V N ++ +A ++ N +P + ++ +T SIG S G+ Sbjct: 409 LSRLGGDEFAIVMTHVNHPADARIMAQKILNAFEQPFPLGNRELRITTSIGASLYPRDGE 468 Query: 504 NRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQP 563 + LL A AM +K GGNG+QF S M+ + L L L++A+ L YQP Sbjct: 469 QSEDLLRHADAAMYQAKKQGGNGFQFCSEEMDTRAHKALELEGDLRQALQLGSFVLHYQP 528 Query: 564 QIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWR 623 ++ +G++ G EAL RW+ P G + P FIPLAEE G I +G WV+ EACRQ W+ Sbjct: 529 KVKIASGKIDGCEALVRWNHPDKGMISPDDFIPLAEETGLIIALGEWVLREACRQFKAWQ 588 Query: 624 SQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKR 683 +Q + ++VNLSA F + + +H + ID H L +E+TESM+ME I K Sbjct: 589 AQGLPPIKIAVNLSARQFLQSDFVESIQTILHEFDIDPHWLDLELTESMVMEDPDRIAKL 648 Query: 684 IQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSI 743 + L+ +G LS+DDFGTG+S L+ L P+ +KID+SF+ ++ ++ ++ I Sbjct: 649 LAELKQIGFALSLDDFGTGYSSLNYLRRFPIDCLKIDRSFILDVASDATAASVANSVIGI 708 Query: 744 GQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLK 798 SL + +AEGVET+EQ+ L C IQGY FS+PLPA ++ +++ P K Sbjct: 709 AHSLGIHAIAEGVETREQYAFLAMCECDSIQGYLFSKPLPANDLAALLANPTPFK 763 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 95/267 (35%), Gaps = 30/267 (11%) Query: 11 DGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLW------------GYKREEVIGNNID 58 + +F +E G +++ V+ N AA L GY E+ G Sbjct: 81 EALFRKVVETIPTGIWVVDREGNVVDCNFAAHGLLQEFGIQAYNDIQGY--AEIQG---- 134 Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRE-LQLEKKDGSKIWTRFALSKVSAEGKV- 116 + +P HP+ +R E RE + + DG + + + +E Sbjct: 135 -WWSDNGQPVHPD--EWGISRSLSRGETCLREKIDIACTDGVRRTVLYTSLPLKSENGAI 191 Query: 117 -YYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 +ALV+D + + E R+ +++ + ++ E + N GY SE Sbjct: 192 TGAMALVQDITEKRKTDEVLRRFRFSIEQASEAIFWINDEGRFLFVNDQACHSLGYSASE 251 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASIS-PVYDV 234 + + P+FPA+ + + + E + G ++ S S +++ Sbjct: 252 LESLHLWDI--DPDFPAERWAEQWERMKSDPKQVFETRHQRKDGRIFPVEVSASQCLFNN 309 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNI 261 +N V DIT ++ + + Sbjct: 310 E---ENHVAFVRDITIRKKYEKELEHQ 333 >UniRef50_Q4C8S6 PAS:GGDEF n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C8S6_CROWT Length = 906 Score = 816 bits (2109), Expect = 0.0, Method: Composition-based stats. Identities = 192/829 (23%), Positives = 367/829 (44%), Gaps = 56/829 (6%) Query: 4 TDA-DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIG--NNIDML 60 T A N+ + + AL+ + G+ + E +F++ E++WG + G + Sbjct: 94 TQATLNSRENHYAQALKFSQTGSWEFDVVTEKVFWSEEVERIWGMEPGTFRGELQQVQGA 153 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRF--ALSKVSAEGKVYY 118 I + E+ + N + + + + E ++ D S W + + K + Sbjct: 154 IHPEDV----EHWQKNVQDCREKGKEHRIEYRIIHPDASIHWVQALGSAEKDDQGNVIRL 209 Query: 119 LALVRDASVEMAQK-----------EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTE 167 L +V D + + E DH V V D + ++++ + Sbjct: 210 LGIVMDITERKQLELEHKETEMALRESEALFRNMADHAPVMVWVTDETGYSTYVSQSWYD 269 Query: 168 MFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKAS 227 G A G +++ E R R + K ++ R G W + Sbjct: 270 FSGQKEGTALGFGWLDVIHPDERELA-RKRFLEFNEKRQPFSIDYRFRRRDGVYCWGIDA 328 Query: 228 ISPVYDVLAHLQNLVMTFSDITEERQIRQLEG----------NILAAMCSSPPFHEMGEI 277 P + + + + DI++ +++ + +++A + + + + + Sbjct: 329 GKPRFSADGQFKGYIGSVMDISDRKRMEEQLRIFECIVATTQDMMALIDQNYTYQIVNDA 388 Query: 278 ICRNI----ESVLNESHVSLFALRNGMPIHWASSSHGA-EIQNAQSW--SATIRQRDGAP 330 RN E ++ +S V + I E ++W ++ Sbjct: 389 YARNFQRAKEEIIGKSVVEIVGEEFMDTIQPHLDRCLQGEEVRYETWFDLGEEQR---YY 445 Query: 331 AGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNL 390 + + ++ + + DI+Q ++S Q + D +T LPNR + Sbjct: 446 HALYSPYREANKGVTSAVVNIHDITQI--------KESEQKLYYQAHHDTLTNLPNRMLM 497 Query: 391 HNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQY 446 + L+ + +A V I +D +++ DSLG+ D L ++ R ++ + Sbjct: 498 NTRLEQSIQQATRKGDKLAVVFIDLDRFKNINDSLGHRAGDSLLEQLAQRLCQQRRKSDT 557 Query: 447 LCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGK 503 + RI G +FV++ + D + + +L +P +I+ + +T S+G+S G Sbjct: 558 VARISGDEFVVILEDIKDTQHAGMVVGKLMRTFEEPFIIEGRTIKMTSSMGLSLFPDDGT 617 Query: 504 NRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQP 563 + LL A AM +++G N + F+ M V E ++L AL+EA+ + L+YQP Sbjct: 618 DVATLLRNADAAMYRAKEDGRNTYCFYRKEMTSTVFEYMLLENALREALKKKEFYLLYQP 677 Query: 564 QIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWR 623 QI + GIEAL RWH P G V P++FIP+AE+ G I+ IG WV+ ACRQ W Sbjct: 678 QIEMLSHRCLGIEALLRWHHPELGVVSPAQFIPIAEQSGLIQEIGTWVLTTACRQAKIWL 737 Query: 624 SQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKR 683 Q + ++VN++A + V + + G+ L +E+TE ++M+ + K+ Sbjct: 738 EQKLDFGRIAVNVAAPQIQHGDFIQVVENVLKTTGLPAAYLELELTEGLLMKQTEQNIKQ 797 Query: 684 IQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSI 743 ++ L+ MG+ L++DDFG G+S L+ L LP+ ++KID+SF+ + A+ +A+ ++ Sbjct: 798 LEKLQGMGIKLTIDDFGIGYSSLNYLKRLPIDKLKIDQSFIRDLPHDTNDTAISQAVIAL 857 Query: 744 GQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 G +LNL ++AEGVE +EQ L++ C QGYFFS+P+P +++ + Sbjct: 858 GYALNLQIIAEGVENEEQAAFLKEKGCHQAQGYFFSQPIPPQQVSALFA 906 Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 37/294 (12%), Positives = 82/294 (27%), Gaps = 38/294 (12%) Query: 109 KVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEM 168 +++ L S + + A+ D V + + Sbjct: 76 RIAQRTAQLSQVLAELHSTQATLNSRENHYAQALKFSQTGSWEFDVVTEKVFWSEEVERI 135 Query: 169 FGYCISEASG--MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKA 226 +G G Q ++ + + +Q K + E+ ++ W++A Sbjct: 136 WGMEPGTFRGELQQVQGAIHPEDVE-HWQKNVQDCREKGKEHRIEYRIIHPDASIHWVQA 194 Query: 227 SISPVYDVLAHLQNLVMTFSDITEERQIR-----------QLEGNILAAMCSSPPFHEMG 275 S D ++ L+ DITE +Q+ + E +P + Sbjct: 195 LGSAEKDDQGNVIRLLGIVMDITERKQLELEHKETEMALRESEALFRNMADHAPVMVWVT 254 Query: 276 EIICR------NIESVLNESHVSLFALRNGMPIHWASSSHGA-------EIQNAQSWSAT 322 + + + + IH E + S Sbjct: 255 DETGYSTYVSQSWYDFSGQKEGTALGFGWLDVIHPDERELARKRFLEFNEKRQPFSIDYR 314 Query: 323 IRQRDGAPAGILQI---KTSSGAETSAFIERVADISQHMAALALEQEKSRQHIE 373 R+RDG + + S+ + +I V DIS ++++ + + Sbjct: 315 FRRRDGVYCWGIDAGKPRFSADGQFKGYIGSVMDIS--------DRKRMEEQLR 360 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 816 bits (2108), Expect = 0.0, Method: Composition-based stats. Identities = 188/793 (23%), Positives = 331/793 (41%), Gaps = 86/793 (10%) Query: 76 NREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLALVRDASVEMAQK- 132 R+ + + + +DG +W L + G + D S + Sbjct: 2 ARQSILISEGQLVHDYRFYHRDGRIVWLLDQLQLIRDAGDRPYEVVGTCLDISERKRTEL 61 Query: 133 ---EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFT---EMFGYCISEA-SGMQPDTLL 185 Q L + V + PVI+ D +H+ N + G P L Sbjct: 62 IRQAQQSALDLIVTNQSLPVILSDIAKHLEAINPDMLVSILLLDKQTKRLKLGAAPS--L 119 Query: 186 NIPEFPADNRIRLQQLLW--KTARDQDEFLLLTR-TGEKIWIKA------------SISP 230 A N + + + TA + E ++++ W P Sbjct: 120 PDDYNAAVNGQEIGEGVGSCGTAAFRGETVIVSDIDHHPHWQHFLDLTRKADLHACWSLP 179 Query: 231 VYDVLAHLQNLVMTFSDIT----------------------EERQIRQLEGNILAAMCSS 268 D + + + I ++ + + S Sbjct: 180 FKDEHNDVLGIFAIYHHIACEPSPKDLELIREFASFTALAVQKVRATEALRLSATVFASI 239 Query: 269 PPFHEMGEI------ICRNIESVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQ 317 + ++ + R + S + +++G+ + A ++ Sbjct: 240 REGVVITDLEPRIVAVNRAYMRITGYSEEQVLGKNPKIIKSGLHDKTFYQAMWATLKATG 299 Query: 318 SWSATI--RQRDGAPAGILQIKTS--------SGAETSAFIERVADISQHMAALALEQEK 367 WS + R+++G + + + ++ DISQ ++ Sbjct: 300 HWSGEVWNRRKNGEIYPQWLTINAVCIDSSCCDESNSCNYVGVFTDISQI--------KQ 351 Query: 368 SRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPV----VYLIGVDHIQDVIDSLGY 423 S + QL +DP+TGLPNR + L +++A V I +D ++V DSLG+ Sbjct: 352 SEAQLAQLAHYDPLTGLPNRLLAQSQLHQAIERAQRHGRLVGVLYIDLDRFKNVNDSLGH 411 Query: 424 AWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPI 482 D+ L+++ R +++++ + L R+ G +F+LV + D+ + +A L N+++ P Sbjct: 412 PVGDELLIKLAERMKKRVREEDTLARLGGDEFLLVLEDVRDLGDPAFVAQSLINLLTSPF 471 Query: 483 MI-DDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVK 539 ++ + SIGIS N L+ + AM +K G N +++ + A++ Sbjct: 472 VLPSGHEIFINASIGISLFPEDASNATELIQHSDMAMYQAKKEGRNTYRYHTEALSVAAN 531 Query: 540 ERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAE 599 ERL++ L+ A+S +L L YQP + A TG + G+EAL RW P VPP +FIP+AE Sbjct: 532 ERLIMENRLRYALSAEELILHYQPLVDARTGYVVGVEALVRWQPPGKAMVPPGKFIPIAE 591 Query: 600 EIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGI 659 E G I +G WV+ AC+Q W + ++VNLS F+S L V + + Sbjct: 592 ETGLIVPLGEWVLRTACKQARAWIDAGLSPLVMAVNLSVRQFQSENLVGMVQRILEETQL 651 Query: 660 DGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKI 719 L +E+TESM MEH + + + L+ +GV L++DDFGTG+S L L P+ ++KI Sbjct: 652 PADYLELELTESMFMEHVEQSIETLNKLKTLGVHLAIDDFGTGYSSLIYLKRFPIDKLKI 711 Query: 720 DKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFS 779 D+ FV + + I ++ + L L V+AEG+E++EQ LR+ C QGY F Sbjct: 712 DQRFVRDLADDHNDREIAATIIAMARGLKLGVLAEGIESEEQLAFLRQQDCDYYQGYLFH 771 Query: 780 RPLPAEEIPGWMS 792 RP+PA E+ W+ Sbjct: 772 RPVPAIELEAWLR 784 Score = 103 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 32/234 (13%), Positives = 72/234 (30%), Gaps = 21/234 (8%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 ++ T+A + G V+ + ++ N A ++ GY E+V+G N ++ Sbjct: 223 VRATEALRLS----ATVFASIREGVVITDLEPRIVAVNRAYMRITGYSEEQVLGKNPKII 278 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-------SAE 113 H + S E+ +K+G ++ V Sbjct: 279 KSG----LHDKTFYQAMWATLKATGHWSGEVWNRRKNGEIYPQWLTINAVCIDSSCCDES 334 Query: 114 GKVYYLALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIVQCNRAFTEMFGY 171 Y+ + D S + Q QL + L ++ ++ + + G Sbjct: 335 NSCNYVGVFTDISQIKQSEAQLAQLAHYDPLTGLPNRLLAQSQLHQAIERAQRHGRLVGV 394 Query: 172 CISEASG-MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWI 224 + + L P +++ R ++E L G++ + Sbjct: 395 LYIDLDRFKNVNDSLGHPVGDELLIKLAERM---KKRVREEDTLARLGGDEFLL 445 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 815 bits (2106), Expect = 0.0, Method: Composition-based stats. Identities = 182/864 (21%), Positives = 342/864 (39%), Gaps = 94/864 (10%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 ++ G + + + + + NPA ++ GY +E+ + L Sbjct: 381 LQSSQEQVRLTFHSASAGIAMTSVDGQFLLVNPAFCEIVGYSEDELKKMHCRDLNDGRNE 440 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYYLALVRD 124 + + EG R E + K G +W R + S + + +V + Sbjct: 441 LDAWKNRQWLLEGKIDRSV---VEKRYTTKSGRSVWVRISASLIKGPDGSPRNLIKVVEN 497 Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNR------AFTEMFGYCISEASG 178 + Q+ + ++ + ++ D V F+ M + A Sbjct: 498 IEQQKRQETLQVEQRHLLERIAAGAVLDDVLLATVTLLEEQYPDLMFSIML-LDKANAFA 556 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDE--------------FLLLTRTGEKIWI 224 L +++ E + + + Sbjct: 557 RGIALRLPKRYLDKLKGLQIGPAAGSCGTAAYERRTVVVADIQQDLLWRNYRDLARRFGL 616 Query: 225 KA-SISPVYDVLAHLQNLVMTFSD----------------------ITEERQIRQLEGNI 261 +A P+ + +S E + + Sbjct: 617 RACWSMPILSSNQQVLGTFAVYSREVRVPEQREMELVSACSHIAGIAIERHHSEEQLKLL 676 Query: 262 LAAMCSSPPFHEMGE------------IICRNIESVLNESHVSLFALRNGMPIHW--ASS 307 ++ + E + + E ++ + + G Sbjct: 677 ETSIARLNDIVLIAEADSEGKQNPRIIFVNKAFERLMGYTAEEVLGKDPGFLDGPNTQME 736 Query: 308 SHG---AEIQNAQSWSATI--RQRDGAPAGI---LQIKTSSGAETSAFIERVADISQHMA 359 A ++ +S + +++G + + +S + ++ DI+ Sbjct: 737 ELWRVKALLKQGESVRTELVNYRKNGEEIWLEMDILPIANSAGVFTHWVSVQRDIT---- 792 Query: 360 ALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQ 415 E++ + I+ L +D +T LPNR L + L+ + ++ + + +D+ + Sbjct: 793 ----ERKAAESRIQHLAFYDMLTNLPNRLLLLDRLEQALLNSMRLKRSGALLFLDLDNFK 848 Query: 416 DVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEND------VSNITQ 469 + D+ G+ + D L +V R ++ + R+ G +FV+V + Sbjct: 849 TLNDTHGHDFGDMLLEQVAQRLLNSVRITDTVARLGGDEFVVVVENLSEQGCNAAQEASL 908 Query: 470 IADELRNVVSKPIMIDDKPFPLTLSIGISYDLGK---NRDYLLSTAHNAMDYIRKNGGNG 526 +AD++ +S+P + + SIG++ + D LL A AM + G N Sbjct: 909 VADKILLALSQPFRLSGYEHYSSCSIGVALFCNEQQVTVDELLKRADLAMYEAKAAGRNT 968 Query: 527 WQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLH 586 ++FF PAM ++ +R + L++A+ ++++L YQPQ+ ++ G L G EAL RW P Sbjct: 969 FRFFDPAMQALITKRAAMEEDLRQALRRDEMRLYYQPQVDSQ-GSLLGAEALVRWEHPQQ 1027 Query: 587 GHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN-IHIPALSVNLSALHFRSNQ 645 G + P+ FI LAEE G I IG WV+ AC QL W + LSVN+SA + Sbjct: 1028 GLLSPAAFIELAEETGLILPIGEWVLRTACMQLVAWAGRPETAGLVLSVNVSARQLHQHD 1087 Query: 646 LPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSG 705 ++V + G + L +E+TES ++E+ E+ ++ IL+ MGVG S+DDFGTG+S Sbjct: 1088 FIDRVFSILKETGANPQSLKLELTESTLVENIEEMITKMNILKAMGVGFSMDDFGTGYSS 1147 Query: 706 LSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEML 765 L+ L LP++++KID+SFV L + ++++ I ++G L + VVAEGVE+ EQ + L Sbjct: 1148 LAYLKRLPLSQLKIDRSFVRDVLVDSNDASIVQTIIALGHGLGIEVVAEGVESWEQQQFL 1207 Query: 766 RKIHCRVIQGYFFSRPLPAEEIPG 789 K C QGY F RP PAE++ Sbjct: 1208 EKHGCLEYQGYLFGRPQPAEQLER 1231 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 100/327 (30%), Gaps = 51/327 (15%) Query: 100 KIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIV 159 +W +V + + + + VEM + Q+ + + + + + Sbjct: 350 LLWNLQIRRRVRERTQALHEEVRQRRMVEMELQSSQEQVRLTFHSASAGIAMTSVDGQFL 409 Query: 160 QCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTG 219 N AF E+ GY E M L + + R L K R E T++G Sbjct: 410 LVNPAFCEIVGYSEDELKKMHCRDLNDGRNELDAWKNRQWLLEGKIDRSVVEKRYTTKSG 469 Query: 220 EKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIIC 279 +W++ S S + +NL+ +I ++++ L+ + + +++ Sbjct: 470 RSVWVRISASLIKGPDGSPRNLIKVVENIEQQKRQETLQVEQRHLLERIAAGAVLDDVLL 529 Query: 280 RNIESVLNESHVSLFALRN------------------------GMPIHWASSSHGAEIQN 315 + + + +F++ G+ I A+ S G Sbjct: 530 ATVTLLEEQYPDLMFSIMLLDKANAFARGIALRLPKRYLDKLKGLQIGPAAGSCGTAAYE 589 Query: 316 AQ---------------------------SWSATIRQRDGAPAGILQIKTSSGAETSAFI 348 + WS I + G + + Sbjct: 590 RRTVVVADIQQDLLWRNYRDLARRFGLRACWSMPILSSNQQVLGTFAVYSREVRVPEQRE 649 Query: 349 ERVADISQHMAALALEQEKSRQHIEQL 375 + H+A +A+E+ S + ++ L Sbjct: 650 MELVSACSHIAGIAIERHHSEEQLKLL 676 Score = 90.8 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 66/170 (38%), Gaps = 17/170 (10%) Query: 3 LTDADNAADGIFFPA---LEQNMMGAVLINEND------EVMFFNPAAEKLWGYKREEVI 53 + + ++ + + ++ + ++F N A E+L GY EEV+ Sbjct: 662 IAIERHHSEEQLKLLETSIARLNDIVLIAEADSEGKQNPRIIFVNKAFERLMGYTAEEVL 721 Query: 54 GNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAE 113 G + L P + + E + EL +K+G +IW + ++ Sbjct: 722 GKDPGFL----DGPNTQMEELWRVKALLKQGESVRTELVNYRKNGEEIWLEMDILPIANS 777 Query: 114 GKV--YYLALVRDASVEMAQKEQTRQL--IIAVDHLDRPVIVLDPERHIV 159 V +++++ RD + A + + + L + +L +++LD + Sbjct: 778 AGVFTHWVSVQRDITERKAAESRIQHLAFYDMLTNLPNRLLLLDRLEQAL 827 >UniRef50_Q31NI4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31NI4_SYNE7 Length = 929 Score = 814 bits (2104), Expect = 0.0, Method: Composition-based stats. Identities = 195/819 (23%), Positives = 366/819 (44%), Gaps = 62/819 (7%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINEND-EVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 T ++ + E N + + + + N AA + +GY ++E + + + Sbjct: 133 TTRLAESESRYRLLFEANPEPMWVFAKQGLQFLAVNQAASQFFGYSQQEFLAMTVLDIQS 192 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALV 122 + + ++ V+ K G ++ + + + L L Sbjct: 193 EEEKTRFLQFFESLICNQI--VDPAVGVWAYRHKQGHLVFADVLIHDFEFDNQPCCLILA 250 Query: 123 RDASVEMAQKE----QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 D + + A +E + + ++ P++V+ +R I N A ++ + + Sbjct: 251 IDITEKQAARELAHQREQAFRKLLNDNRDPLLVISGDRRICYANPAAQKLLKLNLEQLES 310 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 D L + E+ L G ++ S D Sbjct: 311 QSLDLPLLSDKL-------------------TEWALTLPDGSVAEVEIHRSE-TDWEGQP 350 Query: 239 QNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEII---------CRNIESVLNES 289 +L+ DI E + Q + ++ +S + + I E + S Sbjct: 351 ADLLS-LRDIAERKASEQQLRLLKESLEASFNGVVIVDAIEPDMPVIYVNPAFERITGYS 409 Query: 290 HVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATIR--QRDGAPAG---ILQIKTS 339 + L+ + A++ IR ++DG P + + Sbjct: 410 EAEMLGRNCRILQGNERDSLQIEEIHRGLSQAENVHVVIRNFRKDGQPFWNDLYISPIFN 469 Query: 340 SGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDD--- 396 + + FI DI+ EQ++ + + D +TGLPNR L + L Sbjct: 470 AQGNVTHFIGVQNDIT--------EQKRYEEELSFSASHDVLTGLPNRAVLEDRLRQGCK 521 Query: 397 -LVDKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF 455 + + S + I +D + + DS+G+ D L+EV R E+++ + RI G +F Sbjct: 522 MALRQKHSLAILFIDLDGFKLINDSIGHRSGDLLLVEVAQRMCEQVRAGDTVARIGGDEF 581 Query: 456 VLVSLENDVS-NITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGK--NRDYLLSTA 512 +++ ++ + ++ IAD L V++P I +T S+GI+ G L+ A Sbjct: 582 IILLVDLKLENDVISIADRLLASVARPYHIQGIYLHVTASMGITLSDGDIEQPTQLIQQA 641 Query: 513 HNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGEL 572 AM ++ G N +Q+++ +N ++ER+ L L++AI +L +QP+I +G++ Sbjct: 642 DLAMYKAKQEGRNNYQWYTNDLNLRLRERVHLRNELQKAIETEAFELYFQPKIEGCSGQV 701 Query: 573 YGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPAL 632 G+EAL RW P G + P+ F+P+AE+ G+I + +WV+ ACRQL + Q I P++ Sbjct: 702 IGLEALLRWQHPQMGFISPATFVPIAEDTGQIIPLSQWVLETACRQLRDLLQQGIAAPSV 761 Query: 633 SVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGV 692 +VN+S + FR V A+ + + L +EITE+++ ++ + +++Q L+++GV Sbjct: 762 AVNISTVQFRRINFVKSVQSALQKYQLKSEHLEIEITENVLFDNTEKAIEKLQRLKELGV 821 Query: 693 GLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVV 752 +S+DDFGTGFS LS L LP+ +KID+SFV T+ R A+ + I S+ L L VV Sbjct: 822 NISIDDFGTGFSSLSYLKELPIDTVKIDRSFVQEINTDSRDAAITQGIISMAHHLRLNVV 881 Query: 753 AEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 AEGVET++QF+ L++ +C QGY+F++P+P E + ++ Sbjct: 882 AEGVETEQQFKFLQQSNCDQYQGYYFAKPMPFEALKQYL 920 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 814 bits (2103), Expect = 0.0, Method: Composition-based stats. Identities = 192/746 (25%), Positives = 320/746 (42%), Gaps = 42/746 (5%) Query: 78 EGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLAL----VRDASVEMAQKE 133 E GK+ E ++R +LE + G+ S V E +V+ + L A ++ Sbjct: 6 EDGKSSDELIARIRELEARLGALRAAPDTSSLVE-ELRVHQIELEAQNRELIEARRALED 64 Query: 134 QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPAD 193 + D + LD I++ N + G ++ GM A Sbjct: 65 ARDRYSDLYDFAPVGYMTLDEHGVILEINLTGARLLGQDRAQVIGMPLSG-WVPNGAVAQ 123 Query: 194 NRIRLQQLLWKTARDQDEFLLLT---RTGEKIWIKASISPVYDVLAHLQNLVMTFSDITE 250 L+++L + R D L T R ++ + D+++ Sbjct: 124 LFHHLRRVLSEPGRVFDHLPLHTSLVRESPIRHVRLESIAFT-QYGSGRLCRTALVDLSD 182 Query: 251 ERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESHVSLFA-----LRNG 299 ++ I S + + + R +V S + L +G Sbjct: 183 RKREEDRLNLIAQVFERSTDAIMITDSLNRIVSVNRAFTTVTGYSADEVLGRNPKLLASG 242 Query: 300 MPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQI---KTSSGAETSAFIERVADI 354 + I+ SWS I R+++G + I A+I Sbjct: 243 RHDRDFYREMWSAIERNGSWSGEISNRRKNGEIYNEWLTIHAVRNESGGIENCIAIYAEI 302 Query: 355 SQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIG 410 + +Q + I+ L +DP+T LPNR L + + + A V + Sbjct: 303 T--------DQRAAASRIQFLAHYDPLTLLPNRALLQDRMHQGLAHAAREGTRAAVLFLD 354 Query: 411 VDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEND-VSNITQ 469 +D + + DSLG+ D L EV R + ++ D + R G +F+++ D Sbjct: 355 LDRFKTINDSLGHLVGDHLLQEVAQRLKASVREDDTVARRGGDEFIVMLPHVDSAEQAAH 414 Query: 470 IADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGW 527 +A ++ + + I ++ ++ SIGIS + D L+ A AM + +G N + Sbjct: 415 VAGKIIEAMEQTIPVNGYVLNVSFSIGISVFPDDAMDPDTLIRNADIAMYRSKASGRNQF 474 Query: 528 QFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHG 587 QFF+ MN ERL L L A+ + +L++QPQ +G + G EAL RW P G Sbjct: 475 QFFTADMNAHALERLALENDLHRAVERGEFRLMFQPQFE-GSGSIIGAEALLRWQHPQRG 533 Query: 588 HVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLP 647 V P+ FIP+AEE G I IG WV+ AC+Q+ WR + +SVN+SAL F L Sbjct: 534 LVTPAEFIPVAEETGLIVPIGTWVLERACQQVRAWRDAGLKKITVSVNISALQFSQKNLL 593 Query: 648 NQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLS 707 + + I+ L +E+TES++M + L++MGV +++DDFGTG+S LS Sbjct: 594 ELIRRLLAVSNIEPGTLELELTESVLMHDHVATSGLMSELKEMGVRMAIDDFGTGYSSLS 653 Query: 708 RLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRK 767 L S P++++KID+SFV A+ AI + ++LN+ V+AEGVET +Q L+ Sbjct: 654 YLRSFPISKLKIDQSFVRDLSDGGDAGAITGAIIGLAKNLNMRVIAEGVETAQQASFLQA 713 Query: 768 IHCRVIQGYFFSRPLPAEEIPGWMSS 793 C QG+FFS+P+ E+ + + Sbjct: 714 QCCDEFQGHFFSQPVSPEKFAELLRA 739 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 91/259 (35%), Gaps = 1/259 (0%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 ++ A A + + +G + ++E+ ++ N +L G R +VIG + Sbjct: 56 IEARRALEDARDRYSDLYDFAPVGYMTLDEHGVILEINLTGARLLGQDRAQVIGMPLSGW 115 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA 120 +P ++R + + L ++ + +++ Sbjct: 116 VPNGAVAQLFHHLRRVLSEPGRVFDHLPLHTSLVRESPIRHVRLESIAFTQYGSGRLCRT 175 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 + D S ++++ + + +++ D IV NRAFT + GY E G Sbjct: 176 ALVDLSDRKREEDRLNLIAQVFERSTDAIMITDSLNRIVSVNRAFTTVTGYSADEVLGRN 235 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 P LL D + + + E + GE +I V + ++N Sbjct: 236 P-KLLASGRHDRDFYREMWSAIERNGSWSGEISNRRKNGEIYNEWLTIHAVRNESGGIEN 294 Query: 241 LVMTFSDITEERQIRQLEG 259 + +++IT++R Sbjct: 295 CIAIYAEITDQRAAASRIQ 313 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 86/260 (33%), Gaps = 21/260 (8%) Query: 1 MKLTDADNAAD--GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNID 58 + L+D D + E++ ++ + + ++ N A + GY +EV+G N Sbjct: 178 VDLSDRKREEDRLNLIAQVFERSTDAIMITDSLNRIVSVNRAFTTVTGYSADEVLGRNPK 237 Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKV 116 +L H R S E+ +K+G W + + G Sbjct: 238 LLASGR----HDRDFYREMWSAIERNGSWSGEISNRRKNGEIYNEWLTIHAVRNESGGIE 293 Query: 117 YYLALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS 174 +A+ + + + A + + L + L ++ D + A E + Sbjct: 294 NCIAIYAEITDQRAAASRIQFLAHYDPLTLLPNRALLQDRMHQGLA--HAARE---GTRA 348 Query: 175 EASGMQPDTLLNIPEF--PADNRIRLQQLLWK-TARDQDEFLLLTRTGEKIWIKASISPV 231 + D I + LQ++ + A +++ + R G++ + P Sbjct: 349 AVLFLDLDRFKTINDSLGHLVGDHLLQEVAQRLKASVREDDTVARRGGDEFIVML---PH 405 Query: 232 YDVLAHLQNLVMTFSDITEE 251 D ++ + E+ Sbjct: 406 VDSAEQAAHVAGKIIEAMEQ 425 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 814 bits (2103), Expect = 0.0, Method: Composition-based stats. Identities = 180/693 (25%), Positives = 301/693 (43%), Gaps = 41/693 (5%) Query: 134 QTRQLIIAVDHLDRPVIV--LDPERHIVQCNRAFTEMFGYCISEAS--GMQPDTLLNIPE 189 Q R L + +L+ V LD + + + GY + + P+ Sbjct: 15 QARLLSTLLANLEGMVYRCRLDAHWTMEFVSEGCFALTGYTEEDLLFNSRVSYDQITHPD 74 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 R + + + R E+ ++ G + + + L D+T Sbjct: 75 DRRHVRDTILEAVRNNRRFDIEYRIVRADGSIRHVWERGTNISHDNKAWDILEGFIQDVT 134 Query: 250 EERQI----RQLEGNILAAMCSSPPFH------EMGEIICRNIESVLNESHVSLF----- 294 E +Q R+ E + ++ + + + + Sbjct: 135 ERKQADEALREAERRYRSIFENAIEGIYQSTPSDGYLAVNPALARMYGYDSPQALISTLR 194 Query: 295 ----ALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQ---IKTSSGAETSAF 347 + A+ ++ + + +R+G I + +S F Sbjct: 195 DIDNQVYVDPQRRLEFKRLMAKHGVVTNFESRVHRRNGEVIWISENARSVYNSDGTLLFF 254 Query: 348 IERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS---- 403 V I+ E++ I+ D +TGLPNR L++ + V + Sbjct: 255 EGTVEAIT--------ERKLHEAEIQFQATHDALTGLPNRTLLYDRMQQAVLHSERYGKL 306 Query: 404 PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEND 463 + + +D + + DSLG+ D+ L R L+ + R G +FVL+ + Sbjct: 307 TAIAFLDLDQFKFINDSLGHQVGDELLKITAQRLTSCLRESDTVARQGGDEFVLLLTDQP 366 Query: 464 VSNI-TQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIR 520 T + + VS+P +D F +T SIG++ D G++ + LL A +AM + Sbjct: 367 NEEAITHTMQRVLHEVSQPWKANDLEFQITCSIGLTLCPDDGRDAETLLKNADSAMYKAK 426 Query: 521 KNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALAR 580 + G N +Q+FS MN V +RL L L++AI+N L YQP++ + ++ G EAL R Sbjct: 427 ELGRNNFQYFSAEMNSSVTDRLELLNRLRQAITNEDFVLHYQPKVSLASHQIIGAEALVR 486 Query: 581 WHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALH 640 W+ G V P+ FIPLAEE G I +G WV+ ACRQ W+ +SVNLS Sbjct: 487 WNSAHSGMVSPASFIPLAEETGLIIPLGEWVLRTACRQNRAWQDAGYPPIPISVNLSPRQ 546 Query: 641 FRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFG 700 + V + G++ L +EITES+M + F + LR +GV +S+DDFG Sbjct: 547 LARGDIVEVVERILTETGLEAQHLELEITESVMTTDVEKSFALLTQLRSLGVKISLDDFG 606 Query: 701 TGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKE 760 TG+S LS L PV +KID+SFV T++ A+++AI S+G++LNLTV+AEG+ET++ Sbjct: 607 TGYSSLSYLKRFPVDTLKIDQSFVRDIATDQDSAAIVKAIISLGRNLNLTVLAEGIETED 666 Query: 761 QFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 QF+ L C QGY S+P+P + ++ Sbjct: 667 QFQFLLANGCDEGQGYLMSKPVPNKNFVDLLTQ 699 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 59/379 (15%), Positives = 123/379 (32%), Gaps = 26/379 (6%) Query: 11 DGIFFPALEQNMMGAVL---INENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP 67 L N+ G V ++ + + F + L GY E+++ N + + P Sbjct: 15 QARLLSTLLANLEGMVYRCRLDAHWTMEFVSEGCFALTGYTEEDLL-FNSRVSYDQITHP 73 Query: 68 AHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL--ALVRDA 125 ++R E ++ + DGS + +S + K + + ++D Sbjct: 74 DDRRHVRDTILEAVRNNRRFDIEYRIVRADGSIRHVWERGTNISHDNKAWDILEGFIQDV 133 Query: 126 SVEMAQ----KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 + +E R+ ++ + P + N A M+GY +A Sbjct: 134 TERKQADEALREAERRYRSIFENAIEGIYQSTPSDGYLAVNPALARMYGYDSPQALISTL 193 Query: 182 DTLLNIPEFPADNRIRLQQLLWKTARD-QDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 + N R+ ++L+ K E + R GE IWI + VY+ L Sbjct: 194 RDIDNQVYVDPQRRLEFKRLMAKHGVVTNFESRVHRRNGEVIWISENARSVYNSDGTLLF 253 Query: 241 LVMTFSDITEERQIRQLE-----GNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFA 295 T ITE + + L + + ++ + + E + ++ Sbjct: 254 FEGTVEAITERKLHEAEIQFQATHDALTGLPNRTLLYDRMQQAVLHSERYGKLTAIAFLD 313 Query: 296 LRNGMPIHWASSSH---------GAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSA 346 L I+ + + + S T+ ++ G +L + + Sbjct: 314 LDQFKFINDSLGHQVGDELLKITAQRLTSCLRESDTVARQGGDEFVLLLTDQPNEEAITH 373 Query: 347 -FIERVADISQHMAALALE 364 + ++SQ A LE Sbjct: 374 TMQRVLHEVSQPWKANDLE 392 Score = 93.5 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 72/224 (32%), Gaps = 16/224 (7%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 +A A+ + E + G +D + NPA +++GY + + + + + + Sbjct: 141 EALREAERRYRSIFENAIEGIYQSTPSDGYLAVNPALARMYGYDSPQALISTLRDI--DN 198 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL--ALV 122 P+ + + E ++ +++G IW V V Sbjct: 199 QVYVDPQRRLEFKRLMAKHGVVTNFESRVHRRNGEVIWISENARSVYNSDGTLLFFEGTV 258 Query: 123 RDASVEM--AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA---- 176 + + Q + A+ L ++ D + V + + ++ + Sbjct: 259 EAITERKLHEAEIQFQATHDALTGLPNRTLLYDRMQQAVLHSERYGKLTAIAFLDLDQFK 318 Query: 177 -----SGMQP-DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLL 214 G Q D LL I + +R + + D+ LL Sbjct: 319 FINDSLGHQVGDELLKITAQRLTSCLRESDTVARQGGDEFVLLL 362 >UniRef50_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PLR8_VIBFU Length = 1097 Score = 813 bits (2101), Expect = 0.0, Method: Composition-based stats. Identities = 198/835 (23%), Positives = 348/835 (41%), Gaps = 60/835 (7%) Query: 1 MKLTDADNAAD---GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNI 57 ++ T A A Q G V+ + V++ N A L GY EE+ G Sbjct: 273 IRNTSAQVEAQSEIRRLSEVARQTTNGVVITDVKGRVIWINEAFSFLTGYSIEEMQGKKP 332 Query: 58 DMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV- 116 L+ + I A+ G + ++ K + W R A + + +E Sbjct: 333 GELLQGEDTDPATVAI---MRDALAQQNGFNVDVVNYSKAQNSYWVRIACNPLFSESGSL 389 Query: 117 -YYLALVRDASVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY 171 Y+A+ D + E +E R L +D + + + + N + + GY Sbjct: 390 SGYIAIETDITKEKQDEELIRNSQNLLKAVIDANNIGTWHFNIQTGELIINDKWAALLGY 449 Query: 172 CISEASGMQ---PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASI 228 +SE + L + + I + + + + + GE IWI Sbjct: 450 TLSELLPANRYTWERLTHPDDLAYCTTILEKHVSGLIPIYEANLRMKHKNGEWIWINTRG 509 Query: 229 SPV-YDVLAHLQNLVMTFSDITEERQIRQLE----GNILAAMCSSPPFHEMGE------I 277 L+ T DI ++ + + A + + Sbjct: 510 RISSRTYDGKALWLLGTHFDINDQIIAEKALSDKSRQMEAVVEGLLDGIITIDGRGKILT 569 Query: 278 ICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSA-----------TIRQR 326 + + + + M + H + ++ Sbjct: 570 FNQAAQEIFGYTEDETLGKNISMLMGSPHREHHDSYLSNYIERGVSEITGRIRELEALRK 629 Query: 327 DGAPAGI-LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLP 385 DG+ I L I A FI V DI+ E+++ I QL +DP+T LP Sbjct: 630 DGSMFPIELGIVEVQMAGEVNFIGVVRDIT--------ERKQRENEIHQLAFYDPLTLLP 681 Query: 386 NRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKL 441 NR L + L + ++ +V ++ + +D+ +++ DS G+ D L +V R + Sbjct: 682 NRRLLLDRLTEAINHSVRTRNFSALFFLDLDNFKNLNDSAGHNKGDLLLGQVAERLVNSV 741 Query: 442 KPDQYLCRIEGTQFVLVSLEND------VSNITQIADELRNVVSKPIMIDDKPFPLTLSI 495 + + R+ G +FV+++ + + ++A ++ + +++ +D + + SI Sbjct: 742 RQGDTVARLGGDEFVIIASDLSHEPTLAANQAERLAQKIVSNLTREYNLDGLTYNSSASI 801 Query: 496 GISYDLGKNR--DYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAIS 553 G++ +N + LL A AM + G NG QFF P M V R + + L AI Sbjct: 802 GVTLFNSENLPKEDLLKQADMAMYKAKYAGRNGVQFFDPQMQVSVSSRASIVSDLYSAIQ 861 Query: 554 NNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIA 613 + Q L YQ Q+ + G+E L RW P G V P +FIPLAEE G I IG WV+ Sbjct: 862 SQQFVLFYQKQVN-HLKQCIGVEVLLRWIHPEKGMVSPLQFIPLAEETGLIVPIGEWVLE 920 Query: 614 EACRQLAEW-RSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESM 672 EAC LA+W +++VN+S + F + V +A+ G + L +EITE++ Sbjct: 921 EACATLAKWSLESEKQHLSIAVNISVVQFSKDNFVQTVLNALKTSGANPQLLKLEITETL 980 Query: 673 MMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKR 732 + + ++ +++ L+ GV S+DDFGTG+S LS L LP+ ++KID+ FV + Sbjct: 981 LANNIPDVKAKMKELQQHGVTFSIDDFGTGYSSLSYLKQLPINQLKIDQGFVRDIINSSN 1040 Query: 733 ILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 A+ +A+ ++ S+ L V+AEGVET+ Q +L+ + C QGY + +P EE+ Sbjct: 1041 DRAIAQAVITLADSIELQVIAEGVETEAQRALLQSMGCHTYQGYLYGKPCRIEEL 1095 Score = 148 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 57/398 (14%), Positives = 129/398 (32%), Gaps = 43/398 (10%) Query: 4 TDADNAADGIFF------PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNI 57 D + L +I+ N + L ++ ++G + Sbjct: 161 EDQARLQEQFLKGMARTTSILATLPDMVFVIDRNFRFLVCKEH-PDLLK-PQQAILGRTV 218 Query: 58 DMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVY 117 ++P +L E ++ + E + K+ Sbjct: 219 HEILPNELGHQLVECLKQAFCNNDVIHHNYTFEKSNQS-------FEARYKKIDDNE--- 268 Query: 118 YLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 L ++R+ S ++ + + R+L V++ D + ++ N AF+ + GY I E Sbjct: 269 VLVVIRNTSAQVEAQSEIRRLSEVARQTTNGVVITDVKGRVIWINEAFSFLTGYSIEEMQ 328 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 G +P LL + ++ L + + + ++ W++ + +P++ Sbjct: 329 GKKPGELLQGEDTDPATVAIMRDALAQQNGFNVDVVNYSKAQNSYWVRIACNPLFSESGS 388 Query: 238 LQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI----------ICRNIESVLN 287 L + +DIT+E+Q +L N + + + +G I ++L Sbjct: 389 LSGYIAIETDITKEKQDEELIRNSQNLLKAVIDANNIGTWHFNIQTGELIINDKWAALLG 448 Query: 288 ESHVSLFAL------RNGMPIHWAS-----SSHGAEIQNAQSWSATIRQRDGAPAGILQ- 335 + L R P A H + + + ++ ++G I Sbjct: 449 YTLSELLPANRYTWERLTHPDDLAYCTTILEKHVSGLIPIYEANLRMKHKNGEWIWINTR 508 Query: 336 ---IKTSSGAETSAFIERVADISQHMAALALEQEKSRQ 370 + + + DI+ + A +KSRQ Sbjct: 509 GRISSRTYDGKALWLLGTHFDINDQIIAEKALSDKSRQ 546 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 813 bits (2101), Expect = 0.0, Method: Composition-based stats. Identities = 194/720 (26%), Positives = 326/720 (45%), Gaps = 35/720 (4%) Query: 101 IWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQ 160 ++TR+ L ++ L+ + + VD + +I DP I+ Sbjct: 340 LFTRYRLPASISDSLASLADLIALGLERKQNENRLLTQARIVDQIRDAIITTDPAGLIMT 399 Query: 161 CNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGE 220 N+ +FGY EAS LL E + ++ L + Q E + T+ G+ Sbjct: 400 WNQGAQRLFGYTAQEASHRPLSFLLAPHELD-FYQGQVLPQLRERLSYQIEIEVQTKHGD 458 Query: 221 KIWIKASISPVYDVLAH--LQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI- 277 + + S++ ++ DITE ++ + + + + + Sbjct: 459 RRFADFSLTQFSPEGGGSTRGGIICYARDITERQKREERMRLSSRFLEDTNEAVVITDAD 518 Query: 278 -----ICRNIESVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQ 325 + R E + S L++G + W + R+ Sbjct: 519 ARIIEVNRAFEKLTGYSRQEAIGQNPRILQSGHYDADFYREMWDTLLTTGHWEGELWSRR 578 Query: 326 RDGAPAG---ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMT 382 ++ + + ++ D++ +++++ +E+L +D +T Sbjct: 579 KNNELHPKWLSISAVYDQRGRITHYVGISNDLTAT--------KQTQEKLEELTHYDQLT 630 Query: 383 GLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFR 438 LPN + L + +A + + +D ++V DSLG++ D L EV R R Sbjct: 631 SLPNILLFRDRLQQAMARARREEHKVALLIFDLDRFKEVNDSLGHSVGDLVLTEVAQRLR 690 Query: 439 EKLKPDQYLCRIEGTQFVLVS-LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGI 497 ++L +CR G +F L+ D+ Q A + + SKP D LT SIGI Sbjct: 691 QQLSLADTICRPGGDEFYLLLGRLTDIDTAVQAAQNVLELFSKPFQAADHQLYLTPSIGI 750 Query: 498 SYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNN 555 + G+ + L+ + AM + +K+GGN +QFF M R+ + L+ A+ Sbjct: 751 TLFPDDGEEVESLIQSVETAMYHAKKDGGNSFQFFQETMFTAALGRMTMKNRLRRAVELE 810 Query: 556 QLKLVYQPQIFAETGELYGIEALARWHDPLHG-HVPPSRFIPLAEEIGEIENIGRWVIAE 614 + +L YQP+I A+ + G EAL RW P G V P+ FIPLAEE G I IG WV+ + Sbjct: 811 EFELYYQPKIAADGRTVVGAEALIRWVQPERGGPVSPAEFIPLAEETGLIIPIGEWVLRQ 870 Query: 615 ACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMM 674 ACRQ W+ + ++VNLSA+ F+ L ++++ + G+ L +EITES++M Sbjct: 871 ACRQSLLWQQAGLPPLRIAVNLSAVQFKQPGLDDEINWILQEIGLPAELLELEITESLLM 930 Query: 675 EHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRIL 734 E T + L+DMG+ L++DDFGTG+S LS L + P+ +KID+ FV T+ Sbjct: 931 EDVTTANATLWKLKDMGIHLALDDFGTGYSSLSYLKNFPLDTLKIDREFVRDLSTDDEDR 990 Query: 735 ALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 A++ I ++ SL + VVAEGVE +Q LR+ C V QGY FSRPLPA+E ++ S Sbjct: 991 AVIITIITLAHSLKMEVVAEGVEDADQVAFLRQRGCDVFQGYHFSRPLPAKEFEQFLRSQ 1050 Score = 184 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 14/260 (5%) Query: 7 DNAADGIF---FPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI-P 62 + ++Q + + +M +N A++L+GY +E + L+ P Sbjct: 367 RKQNENRLLTQARIVDQIRDAIITTDPAGLIMTWNQGAQRLFGYTAQEASHRPLSFLLAP 426 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEG----KVYY 118 +L + + RE E++++ K G + + F+L++ S EG + Sbjct: 427 HELDFYQGQVLPQLRERLS-----YQIEIEVQTKHGDRRFADFSLTQFSPEGGGSTRGGI 481 Query: 119 LALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 + RD + ++E+ R ++ + V++ D + I++ NRAF ++ GY EA G Sbjct: 482 ICYARDITERQKREERMRLSSRFLEDTNEAVVITDADARIIEVNRAFEKLTGYSRQEAIG 541 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 P +L + AD + L T + E + E SIS VYD + Sbjct: 542 QNP-RILQSGHYDADFYREMWDTLLTTGHWEGELWSRRKNNELHPKWLSISAVYDQRGRI 600 Query: 239 QNLVMTFSDITEERQIRQLE 258 + V +D+T +Q ++ Sbjct: 601 THYVGISNDLTATKQTQEKL 620 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 53/160 (33%), Gaps = 12/160 (7%) Query: 2 KLTDADNAADGIFF---PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNID 58 +T+ + LE V+ + + ++ N A EKL GY R+E IG N Sbjct: 487 DITER-QKREERMRLSSRFLEDTNEAVVITDADARIIEVNRAFEKLTGYSRQEAIGQNPR 545 Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--V 116 +L EL +K+ ++S V + Sbjct: 546 ILQSGHYD----ADFYREMWDTLLTTGHWEGELWSRRKNNELHPKWLSISAVYDQRGRIT 601 Query: 117 YYLALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDP 154 +Y+ + D + +E+ +L + L ++ D Sbjct: 602 HYVGISNDLTATKQTQEKLEELTHYDQLTSLPNILLFRDR 641 Score = 68.5 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 23/220 (10%), Positives = 56/220 (25%), Gaps = 8/220 (3%) Query: 116 VYYLALVRDASVEMAQKEQT----RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY 171 + + ++ +++ QL A + + + +FG Sbjct: 59 LIFWLILHQIQSHRRVQQELMVSSSQLRKAQQIAKMGHWEWKHDDQPLHWSAELYRIFGQ 118 Query: 172 CISEASGMQPDTLLN--IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASIS 229 + L + + + + + G + I Sbjct: 119 DPESYTP-DYQAFLATIPEDDRRQVQEAVAHTQREGVPYDITHRIRLPNGREKIIHERGE 177 Query: 230 PVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNES 289 + D ++ T D+T ++Q + N L + + ++ Sbjct: 178 LIRDEQGRPVKMMGTAQDVTAQKQAEEELQNRLRLLALNAEMGMALTQDRSLEANLQTCC 237 Query: 290 HVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGA 329 + L + W H + + A S R DG Sbjct: 238 QALVNHLDAALARIWLIPDHESVLLLAASAGLETRL-DGE 276 Score = 62.7 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 46/447 (10%), Positives = 118/447 (26%), Gaps = 95/447 (21%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIG--NNIDM 59 ++ + A + MG +D+ + ++ +++G E Sbjct: 73 RVQQELMVSSSQLRKAQQIAKMGHWEWKHDDQPLHWSAELYRIFGQDPESYTPDYQAFLA 132 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VY 117 IP D R E + H + G ++ +G + + E V Sbjct: 133 TIPEDDRRQVQEAVAHTQREGVP----YDITHRIRLPNGREKIIHERGELIRDEQGRPVK 188 Query: 118 YLALVRDASVEMAQKEQTRQLIIAVD-HLDRPVIVLDPERHIVQCN-------------R 163 + +D + + +E+ + + + + + + + + ++ N Sbjct: 189 MMGTAQDVTAQKQAEEELQNRLRLLALNAEMGMALT--QDRSLEANLQTCCQALVNHLDA 246 Query: 164 AFTEMFGYCISE----------ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFL 213 A ++ E +P P + L + R ++ L Sbjct: 247 ALARIWLIPDHESVLLLAASAGLETRLDGEFSRVPIDPRTKIGDI--ALHRQPRVSNQLL 304 Query: 214 LLTRTGEKIWIKASIS-----PVYDVLAHLQNLVMTFSD------IT------------- 249 + W+KA+ +V + ++ F+ I+ Sbjct: 305 NDPQIRNPEWVKANGLQGMAGQPLEVAGKVVGVLALFTRYRLPASISDSLASLADLIALG 364 Query: 250 -EERQIRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNESHVSLFALRNGMPI 302 E +Q + + + + + + + P+ Sbjct: 365 LERKQNENRLLTQARIVDQIRDAIITTDPAGLIMTWNQGAQRLFGYTAQEA----SHRPL 420 Query: 303 HWASSSHGAEIQNAQ-----------SWSATIRQRDGAP----AGILQIKTSSGAETS-A 346 + + H + Q ++ + G + Q G T Sbjct: 421 SFLLAPHELDFYQGQVLPQLRERLSYQIEIEVQTKHGDRRFADFSLTQFSPEGGGSTRGG 480 Query: 347 FIERVADISQHMAALALEQEKSRQHIE 373 I DI+ E++K + + Sbjct: 481 IICYARDIT--------ERQKREERMR 499 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 811 bits (2096), Expect = 0.0, Method: Composition-based stats. Identities = 195/688 (28%), Positives = 319/688 (46%), Gaps = 33/688 (4%) Query: 130 AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE 189 + R+L AV+ V + D + I N +F + GY +EA G P L+ Sbjct: 140 QTEHLVRRLSQAVEQAADSVFITDRQGTIQYVNPSFERLTGYSAAEAIGRTP-ALIKSDR 198 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 +L + Q+ + + G + + +I+P++D + V T D+T Sbjct: 199 HDDAFFHKLWDTILAGRIFQETLVNRRKDGGLFYEEKTIAPLFDEGRGIAGFVSTGRDVT 258 Query: 250 EERQIRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNESHVSLFALRNGMPIH 303 + + Q G +L + ++ F + E + R +VL + + R+ H Sbjct: 259 DRIRDEQTRGQLLEILEATTDFVAIIEGDGRLRYLNRAGRAVLGLTATEDVSSRHIAQCH 318 Query: 304 WASSSHG------AEIQNAQSWSATI--RQRDGAPAGILQIKTSSGAE---TSAFIERVA 352 ++H + +W I R DG + Q+ + G F Sbjct: 319 PEWATHRLLMEAFPTARRDGAWQGEIAARLADGREIPVSQVVLAHGGANEMPEFFSTIAR 378 Query: 353 DISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYL 408 DI+ E++ Q + + D +TGLPNR L + ++ +V + V Sbjct: 379 DIT--------ERKHFEQELRRQATHDALTGLPNRILLEDQIEAVVAHSARSHKLASVLF 430 Query: 409 IGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNI 467 + +D+ + + +SLG+A D L R R+ ++P + R G +F +V + + V NI Sbjct: 431 LDIDNFKRINESLGHAAGDAMLRHAAQRLRDCVRPTDVVARYGGDEFTIVLGDLSHVDNI 490 Query: 468 TQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGN 525 I ++R P++I + + S+G+S G + LL A AM + +G N Sbjct: 491 PAILHKVRAAFETPLVISGQEVYASFSVGVSVYPHDGDDGATLLKNADTAMYRSKASGRN 550 Query: 526 GWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPL 585 +QF++P MN +E L L L+ A+ + +L YQPQ+ + G+EAL RW P Sbjct: 551 RYQFYAPEMNARGQELLSLETDLRRALDRGEFRLHYQPQLDLRDNRIAGVEALLRWKHPR 610 Query: 586 HGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQ 645 G + P F+PL E+ G I +G WV+ AC Q R + +SVN+SA FR + Sbjct: 611 DGVIAPGDFVPLLEDTGLIVPVGEWVLRNACTQYRACRESGVAPVRISVNVSARQFREDT 670 Query: 646 LPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSG 705 L QV + + H L +EITES M+ + L +GV L++DDFGTG+S Sbjct: 671 LLRQVEQVLREECMPPHHLELEITESTAMQDVAATGDILAALDALGVRLAIDDFGTGYSS 730 Query: 706 LSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEML 765 L+ L P+ +KID++F+ + I A+ EA S+G L L VVAEGVET EQ L Sbjct: 731 LAYLKRFPLDALKIDQAFIRDAPRDANIAAIAEASISLGHKLGLEVVAEGVETAEQLAFL 790 Query: 766 RKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 R+ C +IQG+ FSRPLPA+ + +++ Sbjct: 791 RRRACDLIQGFHFSRPLPADALTPFLAR 818 Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 81/255 (31%), Gaps = 6/255 (2%) Query: 12 GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPE 71 A+EQ + + + + NP+ E+L GY E IG ++ H + Sbjct: 146 RRLSQAVEQAADSVFITDRQGTIQYVNPSFERLTGYSAAEAIGRTPALIKSDR----HDD 201 Query: 72 YIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRDASVEM 129 H L +KDG + ++ + EG+ +++ RD + + Sbjct: 202 AFFHKLWDTILAGRIFQETLVNRRKDGGLFYEEKTIAPLFDEGRGIAGFVSTGRDVTDRI 261 Query: 130 AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE 189 ++ QL+ ++ V +++ + + NRA + G +E + + Sbjct: 262 RDEQTRGQLLEILEATTDFVAIIEGDGRLRYLNRAGRAVLGLTATEDVSSRHIAQCHPEW 321 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 + + Q E G +I + + + DIT Sbjct: 322 ATHRLLMEAFPTARRDGAWQGEIAARLADGREIPVSQVVLAHGGANEMPEFFSTIARDIT 381 Query: 250 EERQIRQLEGNILAA 264 E + Q Sbjct: 382 ERKHFEQELRRQATH 396 Score = 74.3 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 63/221 (28%), Gaps = 30/221 (13%) Query: 2 KLTDADNAADGI--FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKR-EEVIGNNID 58 +TD LE +I + + + N A + G E+V +I Sbjct: 256 DVTDRIRDEQTRGQLLEILEATTDFVAIIEGDGRLRYLNRAGRAVLGLTATEDVSSRHIA 315 Query: 59 MLIPRD-LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV- 116 P E R G E+ DG +I + ++ Sbjct: 316 QCHPEWATHRLLMEAFPTARRDGA-----WQGEIAARLADGREIPVSQVVLAHGGANEMP 370 Query: 117 -YYLALVRDASVEMAQKEQTRQL--IIAVDHLDRPVIVLDPERHIVQCNRAFTEM----- 168 ++ + RD + +++ R+ A+ L +++ D +V + ++ Sbjct: 371 EFFSTIARDITERKHFEQELRRQATHDALTGLPNRILLEDQIEAVVAHSARSHKLASVLF 430 Query: 169 ------------FGYCISEASGMQPDTLLNIPEFPADNRIR 197 G+ +A L P D R Sbjct: 431 LDIDNFKRINESLGHAAGDAMLRHAAQRLRDCVRPTDVVAR 471 >UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q60BD0_METCA Length = 1214 Score = 811 bits (2096), Expect = 0.0, Method: Composition-based stats. Identities = 199/828 (24%), Positives = 363/828 (43%), Gaps = 50/828 (6%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKRE-EVIGNNIDML 60 ++ A+ A +G+ + + + M ++ +++G + EV Sbjct: 400 RIAKAERR---RLAEAQRLARVGSWVYDPATDRMTWSEETYRIFGLPFDGEVPHR--YQE 454 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSK--VSAEGKVYY 118 P E I GG+ + G+ R L + + DG+ F + + Sbjct: 455 FAALFVPEDRELIEAALRGGRDDLLGVERPLCVRRADGAVRQVNFKVELQGRRGDSGPVL 514 Query: 119 LALVRDASVE----MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS 174 ++D + A ++ +L + V+HL VI D + + + N A +FGY Sbjct: 515 QGTLQDVTERWEAERALRQSEERLRLHVEHLPLAVIEWDLDFIVSRWNPAAERIFGYGAD 574 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 G L PE + + + + + ++ +T G I + +P+ Sbjct: 575 RMIGRSAGILF--PEDVLEQAEAIWREVSGGSGNRVVTANVTADGRTIRCEWYNTPLTTP 632 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNILAAMC--SSPPFHEMGEIICRNIESVLNESHVS 292 + + DIT + + I R + + Sbjct: 633 DGTVIGVASLVDDITRREAVEAELRLAATTFETDEAILIAGADGRILRVNAAFSRITGYR 692 Query: 293 LFALRNGMPIHWASSSH--------GAEIQNAQSWSATI--RQRDGAPAG---ILQIKTS 339 + P + S H ++ W I R+++G + S Sbjct: 693 QEDVVGRNPRLFKSGLHGAEFYREVWRSLEQTGRWQGEIWNRRKNGEVYPERKTITAVRS 752 Query: 340 SGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD 399 + + + ++ +DIS E +++ + I QL +D +TGLPNR+ + L + Sbjct: 753 ANGDITHYVAISSDIS--------ELKRTEEKIRQLAYYDSLTGLPNRSLIFERLTQQMK 804 Query: 400 KAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF 455 A + + +D+ + + DSLG+ D+ L++V R + L+ ++ R+ G +F Sbjct: 805 AARREGTYGALLFMDLDYFKTLNDSLGHHMGDRLLVQVAERLKNCLEDEEAAARLGGDEF 864 Query: 456 VLVSLENDVS------NITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD-LG-KNRDY 507 V++ S A +R ++S P +DD +++SIGI+ G + Sbjct: 865 VVLLAPAKPSASVAAGQAIVHARRVRELLSAPFQLDDYVHYISVSIGIALFPDGANTAED 924 Query: 508 LLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFA 567 +L A AM + G +G +F+ AM +V+ RL L AL++A++N++ ++ YQPQ+ Sbjct: 925 VLKQADTAMYVAKNEGRDGVRFYESAMEAVVRGRLELEKALRKALANDEFEVYYQPQM-L 983 Query: 568 ETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNI 627 G + G EAL RW P G + P +FIP+ E+ G I +G V+ AC LAE R++ + Sbjct: 984 GDGRVVGAEALIRWFHPERGAISPDQFIPVCEQNGMILRVGAIVLRRACACLAEIRARGL 1043 Query: 628 HIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQIL 687 +P LSVN+S F + L Q+ G+ L +E+TE +++ H +I L Sbjct: 1044 ALPKLSVNVSPRQFMRSDLMTQLEQFCLENGVSPTDLCLELTEGVLLNHTELAVAQIGRL 1103 Query: 688 RDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSL 747 +++GV S+DDFGTG+S L+ L LP+ ++KI +FV + A++E I S+ + L Sbjct: 1104 KNLGVSFSIDDFGTGYSSLAYLKHLPLDDLKIASAFVRDLEQDSSDAAIVETIVSMARHL 1163 Query: 748 NLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 L V+AEGVET+ Q E+L + C QG +F+RPLP ++ +++ Sbjct: 1164 GLDVIAEGVETRTQVEILERYGCHRFQGNYFARPLPKDDFIRFVAERQ 1211 >UniRef50_A9BW89 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=7 Tax=cellular organisms RepID=A9BW89_DELAS Length = 947 Score = 811 bits (2095), Expect = 0.0, Method: Composition-based stats. Identities = 266/850 (31%), Positives = 395/850 (46%), Gaps = 67/850 (7%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A A + L++ M +M N E + GY G L + Sbjct: 84 AGTAGQQALWSTLDKAM-ALAEFTPEGRLMRANANYEAILGYPTSGAEGLLHSDLCTQAH 142 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLALVR 123 R G E +SR + ++DGS W + V + L + Sbjct: 143 ADPDAYGRWRQRWGA---GETISRVGEHRRRDGSTCWLEATYAPVLDTQGALSHVLCIAT 199 Query: 124 DASVE----MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 D + ++E R+L + D D V++ D I N FT MFG+ E G Sbjct: 200 DITARVQADRRRQEHLRRLSLVADATDAAVVIADGNWTISYVNAGFTRMFGWSSEEVVGR 259 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 P LL +P + + L E +L+ + GE+ W+ A +PV L Sbjct: 260 APIALL-VPHASPEFTAAYRAELDAGKPVYREEILVGKDGERYWVSAQANPVMGPDGRLH 318 Query: 240 NLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRN- 298 V +DITE + L+ L AM P E+ +++CR +E + + VS+ + + Sbjct: 319 TTVTVITDITEAKMHEVLQRRALEAMARDQPLTEVLDLVCREVERIAPDIAVSVLEVDDQ 378 Query: 299 --------------------GMPIHWASSSHGAEIQN----------------------- 315 G+PI S GA + Sbjct: 379 SRLHPLAAPSLPASYSAALDGVPIGPNVGSCGAAAFHNRPVLVGDIATDPLWADFKHLIL 438 Query: 316 ----AQSWSATIRQRDGAPAGILQIKTS--SGAETSAFIERVADISQHMAALALEQEKSR 369 WS I G AG F +R+ + + ALALE+E++R Sbjct: 439 PLGYTACWSTPICGLQGGVAGTFAFYYRHFDRPGPDPFHQRLVEACTDLCALALEREQAR 498 Query: 370 QHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAW 425 + I QL +D +T LPNR+ L + + A V I +D + V DSLG+ Sbjct: 499 RRIRQLAFYDGLTTLPNRSLLLAQAEQALSVASHEGHELAVVFIDLDRFKQVNDSLGHPA 558 Query: 426 ADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMID 485 D+ L V R + +L+ R+ G +FV+V + ++ + L++ + +P MID Sbjct: 559 GDRLLCSVAQRIQAELRTGDIAGRLSGDEFVIVLPHCGGAQAAEVIERLQSALGEPCMID 618 Query: 486 DKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLV 543 D T S GI+ G++ + LL A AM + G + FFSP MN + +ERLV Sbjct: 619 DVSLASTASCGIAVFPADGRDMETLLHRADMAMYQAKSGGRGLYSFFSPEMNRLAQERLV 678 Query: 544 LGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGE 603 L AL++A+ + L+L YQPQ+ + G LYG+EALARW G + P+RFIPLAEE G Sbjct: 679 LETALRDALRSGGLRLHYQPQLDLKDGRLYGVEALARWSHAEFGEISPARFIPLAEECGL 738 Query: 604 IENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQ 663 I +G W + EACRQL EWRS+ I +PA+SVNLS F + LP ++D + + Sbjct: 739 IGELGTWALREACRQLGEWRSRGIDVPAMSVNLSPTSFHNLDLPRMIADTLEHNALKPQD 798 Query: 664 LTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSF 723 LT+EITES++++ + + +Q + GV LS+DDFGTG+S LS L LPV+E+K+D+SF Sbjct: 799 LTLEITESLLLDTNPGTMRTLQAVHSQGVRLSMDDFGTGYSSLSYLRRLPVSELKLDRSF 858 Query: 724 VDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLP 783 V ++ AL AI IG+SL+LTVVAEGVET Q +LR+ V QGY FSRPLP Sbjct: 859 VADLENDEAAQALSNAILGIGRSLHLTVVAEGVETAAQNTILREQGYPVAQGYLFSRPLP 918 Query: 784 AEEIPGWMSS 793 A ++ W+ + Sbjct: 919 AADLERWLQA 928 Score = 78.5 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 10/145 (6%) Query: 5 DADNAADGIFFP---ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 AD + V+ + N + + N +++G+ EEV+G L+ Sbjct: 206 QADRRRQEHLRRLSLVADATDAAVVIADGNWTISYVNAGFTRMFGWSSEEVVGRAPIALL 265 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS-AEGKVYYLA 120 P R + GK RE L KDG + W + V +G+++ Sbjct: 266 VPHASPEFTAAYRAELDAGKPVY----REEILVGKDGERYWVSAQANPVMGPDGRLHTTV 321 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHL 145 V E E ++ A++ + Sbjct: 322 TVITDITEAKMHEVLQR--RALEAM 344 >UniRef50_B4B330 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B330_9CHRO Length = 1188 Score = 811 bits (2095), Expect = 0.0, Method: Composition-based stats. Identities = 201/835 (24%), Positives = 345/835 (41%), Gaps = 70/835 (8%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + +A ++ F + + +G + +++ N A ++ G+ E++ L Sbjct: 386 RAEEALKKSEEQFRLVFQHSPIGIAIATPEGKLVRVNEAFSQMMGFTEAELLKRTCGDLT 445 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEG--KVYYL 119 D + G A E + K G ++ + + E + + Sbjct: 446 YPDDLKNEIPLHQKLLAGEIAY---YRLEKRYLTKKGQVLYGMLHVGLIRDEQDKPLNLV 502 Query: 120 ALVRDASV----EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 V D S E+A +E +L + + +IV++ + +I N A ++FG E Sbjct: 503 GQVVDISEKTQAEIALRESEDRLSRIITTISDGLIVVNNQGNIKFINPAGEKLFGRSQEE 562 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL 235 + E + + I + + + + Sbjct: 563 LLEQHFGVPFVDGKT-------------------TEIFIRHANQQLIVAEMRVGLI--IW 601 Query: 236 AHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI-----------ICRNIES 284 + +++ DITE +QI + + S E + E Sbjct: 602 EQQKAHLISLRDITERKQIEKALSESEQRLESILNSIEDVVWSTSATTLNLIYLNPATER 661 Query: 285 VLNESHVSLF--ALRNGMPIHWASSS----HGAEIQNAQSWSATIR--QRDGAPAGI--- 333 V S L +H + H +++ R + DG + Sbjct: 662 VYGCSIEQLLAEGNLWFNLVHPDDQALIDAHFKALEDTGHSEYEYRIVRPDGTVRWLYSR 721 Query: 334 LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNY 393 + + F +DI+ E++ + ++ DP+T LPNR L Sbjct: 722 SRTIYDPTGKPIRFEGIDSDIT--------ERKSFTEQLQYNAYHDPLTSLPNRIFLLEK 773 Query: 394 LDDLVDKAVS-----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLC 448 L++ + K + V + +D + V DSLG+ DQ L+ + R + L L Sbjct: 774 LEEALKKNQNRENIFFAVLFLDLDDFKVVNDSLGHIVGDQLLIAIAQRLKTSLSVPHTLA 833 Query: 449 RIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGK--NR 505 R G +F ++ E + A ++ N +++P ++ + ++ SIGI+ + Sbjct: 834 RFGGDEFTILLEEIQSTDEPLKAAQKIHNDLTQPYDLNGQQVFISTSIGIALSDPSYIHP 893 Query: 506 DYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQI 565 +L A AM ++ G G+ F M+ +RL L L++AI + L YQP + Sbjct: 894 QEILRDADTAMYQAKRWGKGGYAVFDQQMHLRAVKRLHLEIELRQAIELKEFLLYYQPIV 953 Query: 566 FAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ 625 TG L G EAL RW P G + P FIP+AEE G I +G+W+ +ACRQL W+ Q Sbjct: 954 SLSTGYLTGFEALIRWQHPKKGLISPVEFIPIAEETGLIVPMGKWITQQACRQLKLWQEQ 1013 Query: 626 NI--HIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKR 683 + +SVNLS+ R++ L ++ + + GID L +EITESM+ME+ Sbjct: 1014 YNLKNPLQISVNLSSKQLRNSHLIEEIDEILAQTGIDPSSLKLEITESMLMENVDIAMNI 1073 Query: 684 IQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSI 743 + LR + L +DDFGTG+S LS L PVT +KID+SFV + ++ AI ++ Sbjct: 1074 LIELRKRNIELCLDDFGTGYSSLSYLHRFPVTTVKIDRSFVMQMQPGNSNAEIVHAIITL 1133 Query: 744 GQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLK 798 SL +TV AEGVET+ Q + L+ + C QGYFFS+PLP +E + + K Sbjct: 1134 AHSLEMTVTAEGVETQLQLQQLQWLECEQAQGYFFSKPLPPKEAGTLIQAFPCWK 1188 Score = 148 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 65/396 (16%), Positives = 122/396 (30%), Gaps = 36/396 (9%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP 67 A+ ++ + + NPA E GY EE+I LI D R Sbjct: 139 KQAEIQRERFFTLSLDLLCIAGFDGYFKCLNPAWETTLGYSTEELISQPFIELIHPDERE 198 Query: 68 AHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASV 127 A I G E + ++G+ W EG +Y A+ D + Sbjct: 199 AALTEIERLGRGQL----TYHFENRYRTREGTYRWLTLTAVPYVEEGLIY--AVAHDITK 252 Query: 128 EMAQKEQTRQ----LIIAVDHLDRPVIVLDPE----RHIVQCNRAFTEMFGYCISEASGM 179 + + +Q L +DHL V V D + I+ N+ ++FG +EA G Sbjct: 253 RKQTEAEIQQTRNFLQTMIDHLPLAVFVKDGKPETFSQIILWNKTCEKIFGISATEAIGS 312 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 + + + + + + E + + K + P+YD Q Sbjct: 313 TTFEHFSDSQAEFFYQKDRETFARRMPLEIPEEEADSYSLGKRLLHTVKIPLYDEQDQPQ 372 Query: 240 NLVMTFSDITEERQIRQLEGNILA----AMCSSPPFHEMGE------IICRNIESVLNES 289 L+ DITE ++ + SP + + ++ + Sbjct: 373 YLLCISEDITERKRAEEALKKSEEQFRLVFQHSPIGIAIATPEGKLVRVNEAFSQMMGFT 432 Query: 290 HVSLFALRNGMPIHWASSSHGAEIQNA------QSWSATIR--QRDGAP-AGILQI--KT 338 L G + + + + R + G G+L + Sbjct: 433 EAELLKRTCGDLTYPDDLKNEIPLHQKLLAGEIAYYRLEKRYLTKKGQVLYGMLHVGLIR 492 Query: 339 SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQ 374 + + +V DIS+ A + +S + + Sbjct: 493 DEQDKPLNLVGQVVDISEKTQAEIALR-ESEDRLSR 527 Score = 148 bits (374), Expect = 9e-34, Method: Composition-based stats. Identities = 53/384 (13%), Positives = 121/384 (31%), Gaps = 18/384 (4%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINEN----DEVMFFNPAAEKLWGYKREEVIGNNI 57 + ++ + + + +++ +N EK++G E IG+ Sbjct: 255 QTEAEIQQTRNFLQTMIDHLPLAVFVKDGKPETFSQIILWNKTCEKIFGISATEAIGSTT 314 Query: 58 DMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVY 117 + R + + E G ++ + + + Sbjct: 315 FEHFSDSQAEFFYQKDRETFA--RRMPLEIPEEEADSYSLGKRLLHTVKIPLYDEQDQPQ 372 Query: 118 YL-ALVRDASVEMAQKEQT----RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYC 172 YL + D + +E Q + H + + PE +V+ N AF++M G+ Sbjct: 373 YLLCISEDITERKRAEEALKKSEEQFRLVFQHSPIGIAIATPEGKLVRVNEAFSQMMGFT 432 Query: 173 ISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVY 232 +E L + + + + L + A + E LT+ G+ ++ + + Sbjct: 433 EAELLKRTCGDLTYPDDLKNEIPLHQKLLAGEIAYYRLEKRYLTKKGQVLYGMLHVGLIR 492 Query: 233 DVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEII--CRNIESVLNESH 290 D NLV DI+E+ Q + G I+ + +N + Sbjct: 493 DEQDKPLNLVGQVVDISEKTQAEIALRESEDRLSRIITTISDGLIVVNNQGNIKFINPAG 552 Query: 291 VSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGA-PAGILQIKTSSGAETSAFIE 349 LF + + + + + IR + +++ + A + Sbjct: 553 EKLFGRSQEELLEQHFGVPFVDGKTTEIF---IRHANQQLIVAEMRVGLIIWEQQKAHLI 609 Query: 350 RVADISQHMAALALEQEKSRQHIE 373 + DI++ +S Q +E Sbjct: 610 SLRDITERKQIEKALS-ESEQRLE 632 Score = 100 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 31/293 (10%), Positives = 75/293 (25%), Gaps = 45/293 (15%) Query: 108 SKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTE 167 S+ + + D + + Q + + + + + N A+ Sbjct: 118 SQDEQGNCTNCIGVKTDVTEPKQAEIQRERFFTL---SLDLLCIAGFDGYFKCLNPAWET 174 Query: 168 MFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKAS 227 GY E L++ E A +++L E TR G W+ + Sbjct: 175 TLGYSTEELISQPFIELIHPDEREAALTE-IERLGRGQLTYHFENRYRTREGTYRWLTLT 233 Query: 228 ISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPP--------------FHE 273 P + + DIT+ +Q + + Sbjct: 234 AVPYVEEG----LIYAVAHDITKRKQTEAEIQQTRNFLQTMIDHLPLAVFVKDGKPETFS 289 Query: 274 MGEIICRNIESVLNESHVSLFALRNGMP-------------IHWASSSHGAEIQNAQSWS 320 + + E + S + EI ++ S Sbjct: 290 QIILWNKTCEKIFGISATEAIGSTTFEHFSDSQAEFFYQKDRETFARRMPLEIPEEEADS 349 Query: 321 ATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIE 373 ++ +R + + + DI+ E++++ + ++ Sbjct: 350 YSLGKR--LLHTVKIPLYDEQDQPQYLLCISEDIT--------ERKRAEEALK 392 >UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q47ES6_DECAR Length = 832 Score = 810 bits (2093), Expect = 0.0, Method: Composition-based stats. Identities = 203/819 (24%), Positives = 348/819 (42%), Gaps = 60/819 (7%) Query: 16 PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRH 75 L++ N N ++ N A + G E++G L +L ++ Sbjct: 17 ALLDKLATPVFAKNLNGLYIYANEMAGIMLGRPAPEILGRKDSELFASEL----AGRMQT 72 Query: 76 NREGGKARVEGMSRELQL--EKKDGSK-IWTRFALSKVSAEGKVYYLALVRDASVEMAQK 132 + A E S E+ L G + W + + V ++ D + Q+ Sbjct: 73 CDDKLLASGESASCEIWLPDRGHGGERCYWLVRKVLRDKKGQIVGLASVATDITDRKRQE 132 Query: 133 EQT----RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 + + + L + LD E + C+ +++ S+ G +L P Sbjct: 133 LELIALKNKFAATLQALPDLMFELDIEGQFLDCHAQQSKLLVGSPSDMVGKTVHEVL-PP 191 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 + A L + + + +F L G + + S++ H + ++ DI Sbjct: 192 DVAAIFIQSLHEAMEQGISTGSQFQLDLPEGSRR-FELSVAQKASDGDHQPHFIVLSRDI 250 Query: 249 TEERQIRQLEG----NILAAMCSSPPFHEMGEIICRNIES----------VLNESHVSLF 294 T+ + + A + ++P + ++ R I +L + Sbjct: 251 TDRKNAEHALRESESLMRAIVDNTPVEYWARDLEGRCIMENALVVEHWGSLLGKRPED-S 309 Query: 295 ALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDG---APAGILQIKTSSGAETSAFIERV 351 + W ++ + + A + + G + +T + Sbjct: 310 GVSPDELAVWQENN--RRVYEGEVIEAEVEYQVGGQTRIFNNVVAPIKVDGQTIGIVGFN 367 Query: 352 ADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV----DKAVSPVVY 407 DI+ +++++ + I +L +D +T LPNR + + L+ + + + Sbjct: 368 QDIT--------DRKRNEEEIHRLAFYDSLTHLPNRRLMFDRLEHALIGSARRKSHGALL 419 Query: 408 LIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVS-- 465 LI +D+ + + D+ G+ D+ LLEV R + ++ R+ G +FV++ + D + Sbjct: 420 LIDLDNFKFLNDTHGHEVGDELLLEVAKRLKTCIRQGDTAARLGGDEFVVILEDIDGAGN 479 Query: 466 ---NITQIADELRNVVSKPIMI------DDKPFPLTLSIGISYDLGK--NRDYLLSTAHN 514 IA ++ ++ P + + SIGI+ LL A Sbjct: 480 GTIQAELIAGHIQAQLNHPFSLVRPPERLSIDYRCASSIGIALFDDTMVTAKELLRRADT 539 Query: 515 AMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYG 574 AM + G N +FF P M V R L L++AI Q L +Q Q+ ++G G Sbjct: 540 AMYQAKAAGRNTLRFFDPEMQAAVTHRAALETELRKAIDEQQFHLCFQVQMD-QSGRPTG 598 Query: 575 IEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN-IHIPALS 633 EAL RW P G +PP+ FIPLAEE G I IG+WV+A ACRQLA W Q L+ Sbjct: 599 GEALLRWEHPTRGTIPPASFIPLAEETGLIVPIGQWVLATACRQLAAWSQQPETSGLTLA 658 Query: 634 VNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVG 693 VN+SA FR + +Q+ D + G +L +E+TESMM+E I R+ L+ +G+ Sbjct: 659 VNVSARQFRQARFTDQLRDLLLQTGAPATRLKLELTESMMLEDTEAIIGRMAELKQLGIR 718 Query: 694 LSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVA 753 S+DDFGTG+S L+ L LP+ ++KID+SFV LT+ A+ E I ++G L L V+A Sbjct: 719 FSLDDFGTGYSSLAYLKRLPLNQLKIDQSFVRDVLTDPNDAAIAETIVALGNILGLEVIA 778 Query: 754 EGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 EGVET Q+ L + C+ QGY F RPLP E ++ Sbjct: 779 EGVETDAQWRFLANVGCKNYQGYLFGRPLPLLEFEQFLQ 817 Score = 115 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 38/270 (14%), Positives = 87/270 (32%), Gaps = 22/270 (8%) Query: 2 KLTDADNAA------DGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGN 55 +TD F L+ ++ + + + KL +++G Sbjct: 124 DITDRKRQELELIALKNKFAATLQALPDLMFELDIEGQFLDCHAQQSKLLVGSPSDMVGK 183 Query: 56 NIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIW-TRFALSKVSAEG 114 + ++P D+ + + E G + +L +GS+ + A + Sbjct: 184 TVHEVLPPDVAAIFIQSLHEAMEQGISTGSQFQLDL----PEGSRRFELSVAQKASDGDH 239 Query: 115 KVYYLALVRDASVEM----AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFG 170 + +++ L RD + A +E + VD+ D E + N E +G Sbjct: 240 QPHFIVLSRDITDRKNAEHALRESESLMRAIVDNTPVEYWARDLEGRCIMENALVVEHWG 299 Query: 171 YCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISP 230 G +P+ P+ + +++ + E G+ ++P Sbjct: 300 ----SLLGKRPEDSGVSPD-ELAVWQENNRRVYEGEVIEAEVEYQ-VGGQTRIFNNVVAP 353 Query: 231 VYDVLAHLQNLVMTFSDITEERQIRQLEGN 260 + V +V DIT+ ++ + Sbjct: 354 IK-VDGQTIGIVGFNQDITDRKRNEEEIHR 382 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 809 bits (2091), Expect = 0.0, Method: Composition-based stats. Identities = 196/719 (27%), Positives = 313/719 (43%), Gaps = 59/719 (8%) Query: 119 LALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 + D S E ++ L +D + V ++D E +V CN F + + +G Sbjct: 109 AGIAADNSGENEVVQRAAMLETILDSIPCAVSLVDRELQLVACNEEFKRLLDFPPHLFAG 168 Query: 179 MQPD--TLLN--------IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASI 228 P TL P P + L A E R G + I+ Sbjct: 169 SLPSLETLFRYNAARGEYGPGDPDEVVASLLARALHPAPHSFE--RRRRDGTVLLIQGRP 226 Query: 229 SPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMC---SSPPFHEMGEIICRNIESV 285 P V T++DIT ++ ++ + ++G I + Sbjct: 227 LP-------QGGFVTTYTDITARKRDKERLQLADKVFENSREAIVITDLGHRIVSVNPAY 279 Query: 286 LNESHVSLFALRNGMPIH----------------WASSSHGAEIQNAQSWSATI--RQRD 327 + ++ A + S + A + SWS + Sbjct: 280 TEITGIAATAAQGTCFRPGSDDGDSGEEGEGAGGPDSRTVWAIVGEHGSWSGETTGVRCG 339 Query: 328 GAPAG----ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTG 383 G I ++ E + FI +DI+ ++++ I+ L D +TG Sbjct: 340 GQRYPRTLMINGVRDPETREITHFIAIFSDITA--------RKRAEADIQHLAYHDTLTG 391 Query: 384 LPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFRE 439 L NR +L L V +A V + +D + + DSLG+ D+ L +V R R+ Sbjct: 392 LANRFSLTARLQLSVAEARRNGQRLAVMFLDLDRFKHINDSLGHPVGDELLKQVARRLRD 451 Query: 440 KLKPDQYLCRIEGTQFVLVS-LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGIS 498 ++ + R+ G +FV+V ++T +A +L +S P +D T SIGIS Sbjct: 452 AVRETDTVARLGGDEFVVVLQGIGGAHDVTHVAAKLLAQLSAPYCVDTTELHTTASIGIS 511 Query: 499 YD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQ 556 + L+ A AM + + G +QF++ MN RL L L+ A++ + Sbjct: 512 LFPDDSADPAALMRNADTAMYHAKAAGRAKFQFYTDEMNRAATARLDLERKLRGAVARGE 571 Query: 557 LKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEAC 616 +L YQPQ + G L G+EAL RW P G + P RFIPLAEE G I IG WV+ EAC Sbjct: 572 FELWYQPQFDSRHGHLTGLEALVRWRHPQDGLIAPLRFIPLAEETGVIVEIGTWVLREAC 631 Query: 617 RQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEH 676 RQ +W + +SVNLS R L + V + A G+ L +EITES +M++ Sbjct: 632 RQARQWLDAGLPELRISVNLSVRQLREKCLVDTVWTTLAASGLRPGLLELEITESAVMDN 691 Query: 677 DTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILAL 736 E +Q L+++GV +++DDFGTG S LS L P+ +KID+SF+ + + Sbjct: 692 PDEAVALLQALKNLGVRIAIDDFGTGHSSLSYLKLFPLDHLKIDRSFISDIEHDANDTMI 751 Query: 737 LEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 + A S+ +L L+V+AEGVE+ Q LR++ C +QG+ FSRP+ A+ + + SV Sbjct: 752 VAAAVSLAHNLGLSVIAEGVESAVQVARLRELGCDELQGFHFSRPVTADVVENLLRSVW 810 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 37/264 (14%), Positives = 91/264 (34%), Gaps = 22/264 (8%) Query: 12 GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGN--NIDMLI-----PRD 64 + L+ L++ +++ N ++L + G+ +++ L + Sbjct: 126 AMLETILDSIPCAVSLVDRELQLVACNEEFKRLLDFPPHLFAGSLPSLETLFRYNAARGE 185 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRD 124 P P+ + + S E + ++DG+ + + + G ++ D Sbjct: 186 YGPGDPDEVVASLLARALHPAPHSFERR--RRDGTVLLIQGR--PLPQGG---FVTTYTD 238 Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG------ 178 + KE+ + ++ +++ D IV N A+TE+ G + A G Sbjct: 239 ITARKRDKERLQLADKVFENSREAIVITDLGHRIVSVNPAYTEITGIAATAAQGTCFRPG 298 Query: 179 -MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA- 236 D+ + + ++ + E + G++ I+ V D Sbjct: 299 SDDGDSGEEGEGAGGPDSRTVWAIVGEHGSWSGETTGVRCGGQRYPRTLMINGVRDPETR 358 Query: 237 HLQNLVMTFSDITEERQIRQLEGN 260 + + + FSDIT ++ + Sbjct: 359 EITHFIAIFSDITARKRAEADIQH 382 Score = 72.3 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 16/146 (10%), Positives = 37/146 (25%), Gaps = 9/146 (6%) Query: 2 KLTDADNAADGIFFP--ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDM 59 +T + + E + V+ + ++ NPA ++ G G Sbjct: 238 DITARKRDKERLQLADKVFENSREAIVITDLGHRIVSVNPAYTEITGIAATAAQGTCFRP 297 Query: 60 LIPRDLRPAHPEYIR----HNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK 115 E S E + G + ++ V Sbjct: 298 GSDDGDSGEEGEGAGGPDSRTVWAIVGEHGSWSGETTGVRCGGQRYPRTLMINGVRDPET 357 Query: 116 ---VYYLALVRDASVEMAQKEQTRQL 138 +++A+ D + + + L Sbjct: 358 REITHFIAIFSDITARKRAEADIQHL 383 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 809 bits (2091), Expect = 0.0, Method: Composition-based stats. Identities = 188/692 (27%), Positives = 313/692 (45%), Gaps = 37/692 (5%) Query: 128 EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI 187 E + R + + +L + D + + N + + + G DTLL Sbjct: 131 ERELENSNRLFRVFMQNLPAIAFIKDQQGQYIFANASTVDALQLPHEQIIGKH-DTLLFP 189 Query: 188 PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSD 247 P+ + R QQ L + Q K+W+ + PV D+ + ++ D Sbjct: 190 PQLAQEMRAAEQQTLAQGEAIQHVRQFPLADDVKLWL-LTTFPVQDMDGNFNHIGGIGID 248 Query: 248 ITEERQIRQLEGNILAAMCSSPPFHEMGEI---------ICRNIESVLNESHVSLFA--- 295 ITE+R+ + A+ +S + ++ + R E V S Sbjct: 249 ITEQRKAEEALLLRNHAIEASATPILIVDVTQPAMPLIYVNRAFELVTGYSSQEAVGRNC 308 Query: 296 --LRNGMPIHWASSSHGAEIQNAQSWSATIR--QRDGAPAG----ILQIKTSSGAETSAF 347 L+ I+ A +R ++DG+ + + G E F Sbjct: 309 RFLQGHDREQPELEKIRTAIRERCPGYAILRNYRKDGSLFWNELYVAPVPDPHGGEPRYF 368 Query: 348 IERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS---- 403 + DI+ E + ++ +E+ +D +TGL NRN L + + +A Sbjct: 369 VGVQKDIT--------EIRQYQEALERQANYDTLTGLANRNLLKERMQQAISEARRHNWT 420 Query: 404 PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEND 463 V I +D+ + V DS+G++ D+ + + R + L+ + R+ G +FVL+ Sbjct: 421 FSVAFIDIDNFKRVNDSMGHSAGDELIRLLGQRLQSCLRDGDTVARLGGDEFVLLLTSQS 480 Query: 464 VSNITQ-IADELRNVVSKPIMIDDKPFPLTLSIGIS--YDLGKNRDYLLSTAHNAMDYIR 520 + + +RN + P +I + +T SIG++ G+N D LLS A +AM + Sbjct: 481 LDESIHTVVQRIRNTIINPFIITGRQLTVTCSIGLANFPHDGRNADTLLSNADSAMYQAK 540 Query: 521 KNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALAR 580 +G N ++F++ MN + RL L L A+ N QL L YQPQ+ ++ G+EAL R Sbjct: 541 ASGSNNFRFYAKEMNAELGHRLSLENDLWHALENQQLVLHYQPQVCMRNSQIIGMEALIR 600 Query: 581 WHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALH 640 W P G +PP +FIPL+E+ G I IG WV+ A Q + + ++VNLS Sbjct: 601 WQHPKLGMIPPLQFIPLSEDDGLIVPIGIWVMETAAHQNRQLQLAGYPPIRVAVNLSVRQ 660 Query: 641 FRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFG 700 L + + + G+D L +EITESM+M + E + + D+GV LS+DDFG Sbjct: 661 LEQKDLVHCIEKTLQHSGLDPQCLELEITESMLMHNIEESIITLNRISDLGVQLSLDDFG 720 Query: 701 TGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKE 760 TG+S LS L LP+ +KIDKSF++ T + +I ++ SL + V+AEGVE+ + Sbjct: 721 TGYSSLSYLKRLPINRLKIDKSFINDITTTYNDAIIARSIIALAHSLEIQVIAEGVESAD 780 Query: 761 QFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 Q+ L + C +QGY SRP P EE+ + Sbjct: 781 QYAFLLENGCDEVQGYLLSRPRPFEEMEALLR 812 >UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY13_9BACT Length = 857 Score = 809 bits (2090), Expect = 0.0, Method: Composition-based stats. Identities = 176/730 (24%), Positives = 319/730 (43%), Gaps = 74/730 (10%) Query: 128 EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI 187 E+ ++ ++ V+ L + +D + N A ++FGY E G L++ Sbjct: 130 ELELQDGKQRYKRLVEILPDIIYRIDANGYFTFINEAV-QVFGYEPDELIGKHFSELIHP 188 Query: 188 PEFPADNRIRLQQLLWKTARDQDE---FLLLTRTGEKI---------------WIKASI- 228 + +R + D RTG++ +++ +I Sbjct: 189 DDLKKVSRSEVLSEYSGKTSDYKTTPKLFDERRTGQRKTTGLQIRVKSKKSPEYMEYTIQ 248 Query: 229 ---------------------SPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCS 267 S + V DIT + ++ + A+ Sbjct: 249 IIKWPKKHEKIIEVAATGHYDSDIMKNDKRFVGTVGVIRDITGSKHAEEMICTLSLAVEQ 308 Query: 268 SPPFHEMGEIICRN------IESVLNESHVSLFA-------LRNGMPIHWASSSHGAEIQ 314 SP + + R V + G + A + I Sbjct: 309 SPAMIAVTDTDGRIDYINPKFCKVTGFEPEEVLGKNLIDIIQPGGESLSMADKTLWKAIT 368 Query: 315 NAQSWSATI--RQRDGAPAGIL---QIKTSSGAETSAFIERVADISQHMAALALEQEKSR 369 + W R++ G S+ S ++ + DI+ E +++ Sbjct: 369 SKGEWKEAFSSRKKHGELFWTSLSLSAIKSNEGFISHYLAIMEDIT--------EHKQAE 420 Query: 370 QHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAW 425 + I L +D +T LPNR H+ L+ + A V I +D + V D+LG++ Sbjct: 421 ERIHYLAYYDSLTALPNRELFHDRLNMAIIHAHRKQQMLAVAFIDIDRFKKVNDTLGHST 480 Query: 426 ADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDV-SNITQIADELRNVVSKPIMI 484 D+ L + +R + ++ + + R G +FVL+ E + + + + +P++I Sbjct: 481 GDRLLKIIADRLKSCIREEDTVSRQGGDEFVLLLTEISRMEDANDVTQRILKKLKEPVII 540 Query: 485 DDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERL 542 DD ++ SIGI+ G + LL A +AM +++G + + F+S + E E+L Sbjct: 541 DDHDLCISASIGIALYPGDGTTAEALLKNADSAMYISKESGRDNYHFYSSTVQEKAYEQL 600 Query: 543 VLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIG 602 + L+ A+ N +L L YQPQ+ TG L G+EAL RW P G + P+ FIPLAE+ G Sbjct: 601 LEEMYLRRALENRELVLYYQPQVNIATGRLVGMEALLRWKHPKKGLISPAEFIPLAEDTG 660 Query: 603 EIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGH 662 +I I WV+ AC+Q W+ + ++VN+S F L + V++ +H + Sbjct: 661 QIVPIDFWVLHTACKQNMAWQRAGLPSVPIAVNISGHTFGRENLIDFVNNVLHDTRMSPD 720 Query: 663 QLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKS 722 L +EITE + +++ ++ L+ +G+ +++DDFGTGFS LS L P+ ++KI + Sbjct: 721 ALDLEITEGIAIQNLQTTIYKLNKLKSLGIQITIDDFGTGFSSLSYLSKFPIQKLKIGMT 780 Query: 723 FVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPL 782 F+ + A+++A+ ++ +SL LTV+AEGVET EQFE L+ + C QGY S+ + Sbjct: 781 FIHNLHKDPTNSAIVKAVIAMAKSLQLTVIAEGVETDEQFEFLQGLQCDEFQGYLCSKAV 840 Query: 783 PAEEIPGWMS 792 +EE+ +++ Sbjct: 841 TSEEMGRFLA 850 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 50/325 (15%), Positives = 104/325 (32%), Gaps = 43/325 (13%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 ++ + +E I+ N F N A +++GY+ +E+IG + LI Sbjct: 128 QIELELQDGKQRYKRLVEILPDIIYRIDANGYFTFINEAV-QVFGYEPDELIGKHFSELI 186 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI---------------WTRFA 106 D + GK + +L E++ G + + + Sbjct: 187 HPDDLKKVSRSEVLSEYSGKTSDYKTTPKLFDERRTGQRKTTGLQIRVKSKKSPEYMEYT 246 Query: 107 LSKVSAEGK------------------------VYYLALVRDASVEMAQKEQTRQLIIAV 142 + + K V + ++RD + +E L +AV Sbjct: 247 IQIIKWPKKHEKIIEVAATGHYDSDIMKNDKRFVGTVGVIRDITGSKHAEEMICTLSLAV 306 Query: 143 DHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL-NIPEFPADNRIRLQQL 201 + + V D + I N F ++ G+ E G ++ E + L + Sbjct: 307 EQSPAMIAVTDTDGRIDYINPKFCKVTGFEPEEVLGKNLIDIIQPGGESLSMADKTLWKA 366 Query: 202 LWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEG-- 259 + ++ F + GE W S+S + + + + DITE +Q + Sbjct: 367 ITSKGEWKEAFSSRKKHGELFWTSLSLSAIKSNEGFISHYLAIMEDITEHKQAEERIHYL 426 Query: 260 NILAAMCSSPPFHEMGEIICRNIES 284 ++ + P + + I Sbjct: 427 AYYDSLTALPNRELFHDRLNMAIIH 451 Score = 97.4 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 79/229 (34%), Gaps = 18/229 (7%) Query: 2 KLTDADNAADG--IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDM 59 +T + +A + A+EQ+ + + + + + NP K+ G++ EEV+G N+ Sbjct: 288 DITGSKHAEEMICTLSLAVEQSPAMIAVTDTDGRIDYINPKFCKVTGFEPEEVLGKNLID 347 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VY 117 +I KK G WT +LS + + + Sbjct: 348 IIQPGGESLSMAD--KTLWKAITSKGEWKEAFSSRKKHGELFWTSLSLSAIKSNEGFISH 405 Query: 118 YLALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIVQCNRAFTEMFGYC--- 172 YLA++ D + +E+ L + L + D + +M Sbjct: 406 YLAIMEDITEHKQAEERIHYLAYYDSLTALPNRELFHDRLNMAIIHAHRKQQMLAVAFID 465 Query: 173 ------ISEASGMQP-DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLL 214 +++ G D LL I + IR + + + D+ LL Sbjct: 466 IDRFKKVNDTLGHSTGDRLLKIIADRLKSCIREEDTVSRQGGDEFVLLL 514 >UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N2J6_9GAMM Length = 1407 Score = 809 bits (2090), Expect = 0.0, Method: Composition-based stats. Identities = 201/834 (24%), Positives = 356/834 (42%), Gaps = 51/834 (6%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINE-NDEVMFFNPAAEKLWGYKREEVIG-NNID 58 +K A ++ + ++ + + + F + +L GY EE+ + Sbjct: 576 IKAELALKDSEQFWSNVIQTLPDTVYVNDLFAKQTRFSSRHIGELLGYSSEELEEIEHWR 635 Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV-- 116 LI D I + V+ + +L+ K+G+ RF S+E +V Sbjct: 636 QLIHPDDVSKSDAAISQLKTMRPGEVKETTA--RLKHKNGNWRVIRFRDCIFSSETQVPA 693 Query: 117 -YYLALVRDASVEMAQKEQT----RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY 171 YY+ + RD + E K Q R+ + + + V L+ + + + + +M GY Sbjct: 694 QYYVGMARDITEEEDAKIQLSFSERRYRLLANGISDIVFTLNKKLELSYISASINKMLGY 753 Query: 172 CISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRT-------GEKIWI 224 + L + + L + + + T G + + Sbjct: 754 DSDQVMREGLSLFLITESVNKLIQALERDLQLALSISSFKDQVRTMDLDAQTFSGVPVIL 813 Query: 225 KASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE------II 278 + S + + ++ ++ T D+T+ R I +S M + Sbjct: 814 EMQSSILRNESGAIEGILATCRDVTQRRFIEHEARTASEVFENSSEAIMMTTSTGLISRV 873 Query: 279 CRNIESVLNESHVSLFALRNG-----MPIHWASSSHGAEIQNAQSWSATI--RQRDGAPA 331 R + + + H + W + R G Sbjct: 874 NRAFTHLTGFDGQHVIGVNPKQFIAKDVSHQTMQDIRDALLVDGYWQGELDYINRKGEKH 933 Query: 332 GILQ---IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRN 388 + + I +DI+ ++++ I+ L FDP+TGLPNR Sbjct: 934 PSWTGVTALKDEMGQIQSHIIISSDITH--------RKQTEARIQHLAYFDPLTGLPNRA 985 Query: 389 NLHNYLDDLVDKAV-SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYL 447 +H LD L+ K + I +D + + D++G+ DQ L EV +R +E + + Sbjct: 986 QMHEALDRLMAKEESQLALLFIDLDRFKPINDTMGHPAGDQVLKEVASRLKEAVGAKNLV 1045 Query: 448 CRIEGTQFVLVS-----LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD-- 500 RI G +F ++ E + I +++ + + + +P I+D+ L+ S+GI+ Sbjct: 1046 SRIGGDEFTVIMATLPETEQAIQTIIDVSERILHQMMQPFFIEDRQLYLSASVGIALYPE 1105 Query: 501 LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLV 560 + LL A AM + + G N +QF++ MNE ERL L L A+ ++ +L Sbjct: 1106 NALSGTDLLRNADTAMYHAKAMGKNNFQFYAEEMNEKAMERLELENNLHLALQRDEFELT 1165 Query: 561 YQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLA 620 +Q Q + + G+E L RWH P G V P +FIP+ EE G I IG WV+ AC Q+ Sbjct: 1166 FQAQWDIKHNCICGVETLLRWHRPDIGLVGPDKFIPIIEETGLIVPIGEWVLRRACEQIM 1225 Query: 621 EWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEI 680 +W+ IP L+VNLSA F+ Q+ +++ + G+D + +E+TES++M+ Sbjct: 1226 DWQEAGYVIPKLAVNLSARQFKDAQMLDRICRIVDETGVDPELIELELTESILMDDIDRT 1285 Query: 681 FKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAI 740 + R MG GLS+DDFGTG+S LS L PV+++KIDKSF+ + + I Sbjct: 1286 LAVLNEARKMGFGLSIDDFGTGYSSLSYLKQFPVSQLKIDKSFIQNLPYNQEDGQITRTI 1345 Query: 741 TSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPG-WMSS 793 ++ +L L V+AEGVE + Q + L+ I C +QGY +S P+PA+ ++ + Sbjct: 1346 VAMANNLGLGVIAEGVENESQRQFLKTIGCYQVQGYMYSHPVPADLFAQDFLET 1399 Score = 72.3 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 59/436 (13%), Positives = 126/436 (28%), Gaps = 79/436 (18%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKR-EEVIGNNIDMLIP 62 A+ A + AL + + ++F NP+A L G ++V+G + P Sbjct: 307 AKANRAEE-----ALSCIEEVVITTDYRGRIIFCNPSAMTLLGLNDCQQVVGKPLVQSFP 361 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALV 122 D P + N K R+ L G +L + + + ++ Sbjct: 362 FDGLPWLEKD--QNLLKNKLRIVNYGDTLVDV--SGQLKTFNISLYRPEKQNS--CIWVL 415 Query: 123 RDASVEMAQKEQT----RQLIIAVDHLDRPVIVLD----------PER------------ 156 RD S + A ++ + D + +D + Sbjct: 416 RDVSRQAANRDLLNVSRARYQALYDGCGVGMWHVDISLVRSWLEQLDGVSVEDYLKQYPD 475 Query: 157 ---------HIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTA- 206 +++ N + M G + L + + + + + + A Sbjct: 476 SFADLRSSYNLIDINASAVSMHGGSNKQKFIEALKDLFLS--YNHELMQEMAEGIRQGAK 533 Query: 207 RDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIR----QLEGNIL 262 E + G K + + D + Q +V F DI + + E Sbjct: 534 SFSREVAFINAKGVKNHYLVNAT--LDQVGQDQAIVS-FIDINDRIKAELALKDSEQFWS 590 Query: 263 AAMCSSPPFHEMGEIIC-------RNIESVLNESHVSLFALRNGMPIH--WASSSHGAEI 313 + + P + ++ R+I +L S L + + + S A I Sbjct: 591 NVIQTLPDTVYVNDLFAKQTRFSSRHIGELLGYSSEELEEIEHWRQLIHPDDVSKSDAAI 650 Query: 314 QNAQSWS--------ATIRQRDGAPAGI----LQIKTSSGAETSAFIERVADISQHMAAL 361 ++ A ++ ++G I + + ++ DI++ A Sbjct: 651 SQLKTMRPGEVKETTARLKHKNGNWRVIRFRDCIFSSETQVPAQYYVGMARDITEEEDAK 710 Query: 362 ALEQEKSRQHIEQLIQ 377 S + L Sbjct: 711 IQLS-FSERRYRLLAN 725 Score = 44.6 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 46/161 (28%), Gaps = 8/161 (4%) Query: 123 RDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCI-SEASGMQP 181 ++ + + + A+ ++ VI D I+ CN + + G + G Sbjct: 297 KNQTDLDRFSAKANRAEEALSCIEEVVITTDYRGRIIFCNPSAMTLLGLNDCQQVVGKPL 356 Query: 182 DTLLNIPEFPADNRIRLQQLLWKTAR-DQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 P + Q LL R L+ +G+ S+ + Sbjct: 357 VQSFPFDGLP--WLEKDQNLLKNKLRIVNYGDTLVDVSGQLKTFNISLY----RPEKQNS 410 Query: 241 LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRN 281 + D++ + R L A + +G Sbjct: 411 CIWVLRDVSRQAANRDLLNVSRARYQALYDGCGVGMWHVDI 451 >UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TLA6_ACIAC Length = 1120 Score = 808 bits (2089), Expect = 0.0, Method: Composition-based stats. Identities = 195/834 (23%), Positives = 347/834 (41%), Gaps = 59/834 (7%) Query: 2 KLTDADNAADGIFFPALEQNMMGA---VLINENDEVMFFN--PAAEKLWGYKREEVIGNN 56 + ++ ++ + F + A E+L G +V+ + Sbjct: 279 EAESRLRESESRLQLLGRNLPDSVPYQMVREPDGRRRFVHMGEALERLVGVSAADVM-ED 337 Query: 57 IDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV 116 L + P E + +++ + DG+ W R + S +G Sbjct: 338 AQRLFD-RIDPEDRAAQAEADEVSYRTMGVGESVVRMRRMDGAPRWIRLSSSPRLLQGGS 396 Query: 117 YYL---ALVRDASVEMAQKE----QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMF 169 + ++ D + + ++ QL + + + LD + I+ N + + Sbjct: 397 GRVIWDGVLTDVTQQREAQDLSRAHEIQLASLLGRMPGGISRLDRDLRILYVNPSQAQWL 456 Query: 170 GYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASIS 229 E G + +L+ + + LQ L + ++ R + +I Sbjct: 457 RRTPQELEGQRASDVLSAELLQSLHPHMLQAL--QGRPVVFDYRSPYRGAGPEFFHTTII 514 Query: 230 PVYDVLAHLQNLVMTFSDITEER----QIRQLEGNILAAMCSSPPFHEMGEIICR----- 280 P + +++ D+TE++ ++ Q + + + + P + + R Sbjct: 515 PETGPDGRVVAIMVFAVDVTEQKHLALELSQQRSRLASLVNAIPDVVFLKDAAGRYLSCN 574 Query: 281 -NIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQ--SWSATIRQRD---------G 328 E L + L + + ++ ++ +W + + G Sbjct: 575 PVFERYLGRRERDIVGLGDEELMTPVEAARVRQLDERAMAAWQPLVYEETLTFAEDGYAG 634 Query: 329 APAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRN 388 I + + DI+ +++K+ Q IE L FD +TGLPNR Sbjct: 635 YFETIKTPIRDMHGHVTGLLSVSRDIT--------DRKKAEQQIELLAFFDALTGLPNRR 686 Query: 389 NLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPD 444 L + L + I +D+ +D+ D+LG+ D+ L++V R +E ++ Sbjct: 687 LLLDRLQRAGAACQRNEKLGALLFIDLDNFKDLNDTLGHDMGDRLLVQVAQRLQECVRTS 746 Query: 445 QYLCRIEGTQFVLVSLENDVS------NITQIADELRNVVSKPIMIDDKPFPLTLSIGIS 498 + R G +FV++ D Q+A++L +++P + + T SIGI+ Sbjct: 747 DTVARFGGDEFVVMLEGLDADTALAALQAEQVAEKLLAQLNRPFEMGAQQHYSTPSIGIT 806 Query: 499 YDLGK--NRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQ 556 + D LL A AM + G N +FF P M V R L + L++ I+ ++ Sbjct: 807 LFGDQRRTVDELLKRADLAMYQAKAAGRNTQRFFDPDMQAQVTARSQLESDLRQGIARHE 866 Query: 557 LKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEAC 616 L + QP + T L G EAL RW P+ G + P+ FIPLAEE G I +GR V+ AC Sbjct: 867 LTVHLQPIVDGST-RLCGAEALVRWRHPVKGLISPADFIPLAEETGLILPLGRQVLQTAC 925 Query: 617 RQLAEWRSQNI-HIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMME 675 QL W + ++VN+SA FR +V + G + +L +E+TES+++ Sbjct: 926 EQLVRWATHPATASFTIAVNVSARQFRQPDFVAEVLGTLAGTGANPQRLKLELTESLLLG 985 Query: 676 HDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILA 735 + R+ L+ +GVG ++DDFGTG+S LS L LP+ +KID+SFV LT+ A Sbjct: 986 DVEDTICRMAQLKRVGVGFALDDFGTGYSSLSYLKRLPLDLVKIDQSFVRDVLTDPNDAA 1045 Query: 736 LLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPG 789 ++ I ++ +SL+L VVAEGVET Q L+ C QGY F RP+P E Sbjct: 1046 IVRTILALAKSLDLQVVAEGVETAGQLSFLKLHGCEGFQGYLFGRPVPLEAFER 1099 >UniRef50_Q55576 Slr0359 protein n=2 Tax=Cyanobacteria RepID=Q55576_SYNY3 Length = 1244 Score = 808 bits (2088), Expect = 0.0, Method: Composition-based stats. Identities = 180/836 (21%), Positives = 349/836 (41%), Gaps = 73/836 (8%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 A++ F + G +++++ + F NPAA +++ + E++ + Sbjct: 420 EQQLRASEEFFSSMIVTITDGLLIVDQEGIIQFVNPAAREMFKRQEGELLQQPFGIPFVA 479 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVR 123 D E+ L DGS + +S + + +L +R Sbjct: 480 DQA----------------------TEITLTPLDGSMVVAEMRVSPIHWQKGKAFLVSLR 517 Query: 124 DASVEMAQK----EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 D + + + E ++ V+ + +LD ++ N+ +M GY + E Sbjct: 518 DITEQHQARLALAESEKKYRYIVELTSEGIWILDQDQQTTFANQQLADMLGYSVQEILEK 577 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTAR-------DQDEFLLLTRTGEKIWIKASISPVY 232 + + +++ Q+ L R + R G +W S S Y Sbjct: 578 NITAFVLVIHHLPESQNSHQKTLQSFPRCVLPNHGQVYDVQFQRRDGSVLWGLVSRSAWY 637 Query: 233 DVLAHLQNLVMTFSDITEERQIRQ-----------LEGNILAAMCSSPPFHEMGEIICRN 281 D + + + +DIT+ + Q + G+I + S+ + Sbjct: 638 DQWGNYRGELAMLTDITKRKSAEQALSASEQRLEGILGSIQDVVWSADAVSFATLYLNPT 697 Query: 282 IESVLNESHV--------SLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGI 333 V +S + G + ++ I Q G + Sbjct: 698 TAMVYGQSLEVCYQSQNFWFEQVHPGDRLLLEYHLQLLMEKDQTELEYRIVQPGGKERWL 757 Query: 334 ---LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNL 390 Q+ + +DI+ E++ + + + D +T LPNR+ Sbjct: 758 FRRSQLVRDGEHQPLRIDSIDSDIT--------ERKLAAEKLHYNANHDSLTNLPNRSMF 809 Query: 391 HNYLDDLV-----DKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQ 445 + L + + + V + +D + + DSLG++ D L + +R R+ L+P+ Sbjct: 810 LDRLGHALQRNLRRRDLRFAVLFLDLDGFKIINDSLGHSCGDLLLQGIAHRLRQCLRPED 869 Query: 446 YLCRIEGTQFVLVSLEND-VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGK- 503 L R+ G +F ++ ++ +A + + KP ++ + SIGI+ + Sbjct: 870 TLARLGGDEFTMLIENITCPEDVIAVAQRIHQELQKPFNLNGQEIFTNTSIGIALNHPHY 929 Query: 504 -NRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQ 562 + +L A AM + G + F+ M+ +RL L+ AI +L+L YQ Sbjct: 930 GHPQDVLRDADTAMYRAKAAGKGRYAIFNQTMHHHAVQRLQRENDLRRAIDRQELQLHYQ 989 Query: 563 PQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEW 622 P + +TG+L G+EAL RW P G + P F+ +AEE G I +G W++ EA RQ+ E Sbjct: 990 PIVCLKTGQLQGVEALVRWQHPEEGLILPEEFVAIAEETGLIVPMGDWILWEASRQILEL 1049 Query: 623 RSQN--IHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEI 680 + + +S+N+S+ R +L V + + + + L +EITES+++++ Sbjct: 1050 KQSFPQLSHLQVSINVSSRQLRDQRLLKTVDEILSSTNLAPQDLKLEITESLLIDNLNLA 1109 Query: 681 FKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAI 740 ++ LR + +S+DDFGTG+S LS L P+ IK+D+SFV+ + A++ I Sbjct: 1110 ADVLKSLRQRNIQISLDDFGTGYSSLSYLHRFPINTIKVDRSFVNTMEPNNQNTAIVHTI 1169 Query: 741 TSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLP 796 ++ +L L V+AEG+ET+ L + C QGY+F+RP+P+E++ +++ +P Sbjct: 1170 VTLAHTLGLDVIAEGIETERHLTQLHWLGCDAGQGYYFARPIPSEDLLDFLTIQIP 1225 Score = 166 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 65/402 (16%), Positives = 136/402 (33%), Gaps = 60/402 (14%) Query: 9 AADGIFFPALEQNMMGAVLINE---NDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 + A++ + G ++ + ++ V++ N E + G+ REEVIG N L+ D Sbjct: 293 ERLLLLQQAIDASSNGILITDALGSDNAVVYANQGFETITGFNREEVIGQNCRFLLNEDR 352 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVR 123 + + + R A + L+ +KDG+ W LS + + V ++ + Sbjct: 353 QGEQNKQLEKLR-TAIAHGQECEVVLKNYRKDGASFWNHLYLSPIYNQQNFLVNFIGIQT 411 Query: 124 DASVEMAQKEQTRQLIIAVDHL----DRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 D + + ++Q R + ++++D E I N A EMF E Sbjct: 412 DVTQQKLAEQQLRASEEFFSSMIVTITDGLLIVDQEGIIQFVNPAAREMFKRQEGELLQQ 471 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 + E L G + + +SP++ Sbjct: 472 PFGIPFVADQA-------------------TEITLTPLDGSMVVAEMRVSPIHWQKGK-- 510 Query: 240 NLVMTFSDITEERQIR----QLEGNILAAMCSSPPFHEMGE------IICRNIESVLNES 289 +++ DITE+ Q R + E + + + + + + +L S Sbjct: 511 AFLVSLRDITEQHQARLALAESEKKYRYIVELTSEGIWILDQDQQTTFANQQLADMLGYS 570 Query: 290 HVSLFA------LRNGMPIHWASSSHGAEIQ---------NAQSWSATIRQRDGAPAGIL 334 + + + + +SH +Q + Q + ++RDG+ L Sbjct: 571 VQEILEKNITAFVLVIHHLPESQNSHQKTLQSFPRCVLPNHGQVYDVQFQRRDGSVLWGL 630 Query: 335 QIK---TSSGAETSAFIERVADISQHMAALALEQEKSRQHIE 373 + + + DI++ +A S Q +E Sbjct: 631 VSRSAWYDQWGNYRGELAMLTDITKRKSAEQALS-ASEQRLE 671 Score = 100 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 85/256 (33%), Gaps = 12/256 (4%) Query: 127 VEMAQKEQTRQLIIAVDHLDRPVIVLDP---ERHIVQCNRAFTEMFGYCISEASGMQPDT 183 +E+ L A+D +++ D + +V N+ F + G+ E G Sbjct: 287 DRQEYEERLLLLQQAIDASSNGILITDALGSDNAVVYANQGFETITGFNREEVIGQNCRF 346 Query: 184 LLNIPEFPAD--NRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNL 241 LLN +L+ + + + G W +SP+Y+ L N Sbjct: 347 LLNEDRQGEQNKQLEKLRTAIAHGQECEVVLKNYRKDGASFWNHLYLSPIYNQQNFLVNF 406 Query: 242 VMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRN--IESVLNESHVSLFALRNG 299 + +D+T+++ Q S G +I I +N + +F + G Sbjct: 407 IGIQTDVTQQKLAEQQLRASEEFFSSMIVTITDGLLIVDQEGIIQFVNPAAREMFKRQEG 466 Query: 300 MPIHWASSSHGAEIQNAQSWSATIRQRDGA-PAGILQIKTSSGAETSAFIERVADISQHM 358 + Q + + DG+ +++ + AF+ + DI++ Sbjct: 467 ELLQQPFGIPFVADQATEITLTPL---DGSMVVAEMRVSPIHWQKGKAFLVSLRDITEQH 523 Query: 359 AALALEQEKSRQHIEQ 374 A +S + Sbjct: 524 QARLA-LAESEKKYRY 538 >UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B7KEN2_CYAP7 Length = 1471 Score = 808 bits (2087), Expect = 0.0, Method: Composition-based stats. Identities = 196/827 (23%), Positives = 367/827 (44%), Gaps = 56/827 (6%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 ++ + + ++ + I+ N ++ N E++ G+ EE+ N+++L Sbjct: 663 EIEEELKQQGELLQTIVDYIPVMLAYIDPNYNFLWVNEEFERILGWSLEEI--KNLNILA 720 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLAL 121 P +Y+ + + + + E L+ +G+ I T +A K+S + + Sbjct: 721 QLYPDPDERQYVMNYIQSAEEKWEDFKTRLR----NGTTIDTSWANVKLSNG---AIIGI 773 Query: 122 VRDASVEM----AQKEQTRQLIIAVDHLDRPVIVLDPER-HIVQCNRAFTEMFGYCISEA 176 +D +V A +E ++ + P+ V D + ++ N+A E +GY E Sbjct: 774 GQDITVRKHIEEALRESEQKYRLLFYANPNPLWVYDVKTLAFLEVNQAAIEHYGYSREEF 833 Query: 177 SGMQPDTLLNIPE--FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 GM + + + ++ Q GE I ++ + + Sbjct: 834 LGMTLRDIRPSEDVKILETYIANINPSFNRSGYWQ----HRKSNGEIIDVEITSHGI--E 887 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNILAAMCSS------PPFHEMGE----IICRNIES 284 A Q ++ +DITE+ + +Q + P + + Sbjct: 888 FAGRQARLVLVNDITEQLKAQQKLQESENRFRRAVIDAPLPILIHAEDGEIIQVNHAWTE 947 Query: 285 VLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAET 344 + +H + + + W ++G + +S + + DG T ET Sbjct: 948 LTGYTHEDIPTIAD-----WTEKAYGERKEIVRSVIDELYKIDGKVEEGEFTITIKTGET 1002 Query: 345 SAF------IERVAD---ISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLD 395 + + R+AD + MA E++++ + + D +TGLPNR L + ++ Sbjct: 1003 RIWNFSSAPLGRLADNRRLIMSMALDITERKQAEEQLRHAAVHDQLTGLPNRILLLDRIE 1062 Query: 396 DLVDKAVS-----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRI 450 + + + I +D + V DSLG+ DQ L + ++ + ++P + R Sbjct: 1063 QAIKRTQQEEKYLFALLFIDLDRFKVVNDSLGHWVGDQLLGAIADKLKACVRPMDTVARF 1122 Query: 451 EGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLG--KNRDY 507 G +FV++ + T++A ++ + + + + F +++SIGI++ ++ Sbjct: 1123 GGDEFVILLENLTSRTEATKMAQQITDELRSSFCLQGQDFFISVSIGITFPSSYEESASE 1182 Query: 508 LLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFA 567 LL A AM ++ G + F M+ L L L+ A+ +L + YQP + Sbjct: 1183 LLRNADIAMYRAKEKGRARYTIFDSKMHIQATRLLELETNLRLALEREELIVHYQPIVSL 1242 Query: 568 ETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ-- 625 TG+L G EAL RW P G + P FIP+AEE G I +G WV+ E+CRQ+ W+ + Sbjct: 1243 TTGKLLGFEALVRWEHPKKGLISPGEFIPIAEETGLIIPLGEWVLLESCRQMKAWQKEFS 1302 Query: 626 NIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQ 685 + +SVNLS L N + + G++G L +EITESM+M + + + Sbjct: 1303 GLDKIRVSVNLSGKQLEYPHLINCLESILKQTGLEGKNLKLEITESMLMNNKEVVSDLLL 1362 Query: 686 ILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQ 745 ++ + +S+DDFGTG+S LS L LPV +KID+SFV+R ++EAI ++ Sbjct: 1363 QIKGKNIQISIDDFGTGYSSLSYLHYLPVDTLKIDRSFVNRMTQLGENFEIVEAIINLAH 1422 Query: 746 SLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 L + VVAEGVET++ + L+++ C QGYFFS+PL ++++ W Sbjct: 1423 HLQMDVVAEGVETEQHIKQLKQLGCESGQGYFFSKPLDSQKVTSWFE 1469 Score = 151 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 56/406 (13%), Positives = 133/406 (32%), Gaps = 47/406 (11%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 + A ++ + +E+ + ++ + + + GY +E+ L Sbjct: 280 VEKALMESEAKYERLVERLPAVIYQFSPTKGKLYCSSYVKSILGYSTDEI------DLPW 333 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKD--GSKIWTRF-ALSKVSAEGKVYYL 119 + HPE + +E + V+G + E++ KD G W ++ + +A+ ++ Sbjct: 334 LWINSIHPEDLPKVKEMIQEFVQGKNFEIEYRVKDAQGQWHWILDRSIGRQAADQEMMIE 393 Query: 120 ALVRDASV----EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 + D + +MA ++ + L VD+ VI D + + + + ++FG+ E Sbjct: 394 GVAIDITETKKTQMALQQAHQCLTFHVDNSPLGVIEWDNDYRVKRWSSQAEKIFGWKEEE 453 Query: 176 ASGMQP--DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYD 233 G + + + + +T+R T+TGE I K S YD Sbjct: 454 VVGKGWQEWQFVYEEDLDLIVAKVSEIIKKETSRHFVTNRNYTKTGEIIDCKWYNSVQYD 513 Query: 234 VLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPP--FHEMGEIICRNIESVLNESHV 291 + +++ D++E+++ + + + E + E ++S Sbjct: 514 QSGEILSILSLVLDVSEQKRAEAALQVSQERLQLALEGSGDSIWEWNLQTGEIYCDQSWW 573 Query: 292 SLFALRNGMPIH-----------WASSSHGAEIQ-------NAQSWSATIRQRDGAPAGI 333 H A +Q + I+ G + Sbjct: 574 QKLGYEPDHETMSYEWWRSQVAPEFLPIHEASLQDYLAGKTEYLTLEYKIQSSSGDWVWM 633 Query: 334 LQ----IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQL 375 + + DI+ E ++ + ++Q Sbjct: 634 SARGKSVANDEEGNPLKIVGTHRDIT--------ESKEIEEELKQQ 671 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 66/412 (16%), Positives = 142/412 (34%), Gaps = 43/412 (10%) Query: 1 MKLTD------ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIG 54 + +T+ A A ++ + +G + + + V ++ AEK++G+K EEV+G Sbjct: 397 IDITETKKTQMALQQAHQCLTFHVDNSPLGVIEWDNDYRVKRWSSQAEKIFGWKEEEVVG 456 Query: 55 NNIDM--LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI---WTRFALSK 109 + + + + +R + + K G I W ++ Sbjct: 457 KGWQEWQFVYEEDLDLIVAKVSEIIKKETSRHFVTN---RNYTKTGEIIDCKWYN-SVQY 512 Query: 110 VSAEGKVYYLALVRDASVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAF 165 + + L+LV D S + + + +L +A++ + + + + C++++ Sbjct: 513 DQSGEILSILSLVLDVSEQKRAEAALQVSQERLQLALEGSGDSIWEWNLQTGEIYCDQSW 572 Query: 166 TEMFGYCIS-EASGMQPDTLLNIPEFPADNRIRLQQLLWK-TARDQDEFLLLTRTGEKIW 223 + GY E + PEF + LQ L T E+ + + +G+ +W Sbjct: 573 WQKLGYEPDHETMSYEWWRSQVAPEFLPIHEASLQDYLAGKTEYLTLEYKIQSSSGDWVW 632 Query: 224 IKASISPVY-DVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMG------- 275 + A V D + +V T DITE ++I + + + + + Sbjct: 633 MSARGKSVANDEEGNPLKIVGTHRDITESKEIEEELKQQGELLQTIVDYIPVMLAYIDPN 692 Query: 276 ---EIICRNIESVLNESHVS-----LFALRNGMPIHWASSSHGAEIQNAQSWSA-TIRQR 326 + E +L S + A P + + + W R R Sbjct: 693 YNFLWVNEEFERILGWSLEEIKNLNILAQLYPDPDERQYVMNYIQ-SAEEKWEDFKTRLR 751 Query: 327 DGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQF 378 +G + A I DI+ + +S Q +L+ + Sbjct: 752 NGTTIDTSWA--NVKLSNGAIIGIGQDITVRKHIEEALR-ESEQK-YRLLFY 799 Score = 118 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 50/433 (11%), Positives = 118/433 (27%), Gaps = 75/433 (17%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 K+ A + + +E+ + + F N A + + E ++ LI Sbjct: 121 KIKQALKKSRSRYRAIVEEQTELICRFRPDGTLTFVNEAYYRYFEKTPEYLLEKIFLPLI 180 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYYL 119 P + + ++ + + ++ E ++ G W ++ + + + Sbjct: 181 PFPDQQQVLDNLKSLNQ----QKRVITHEHRVIISSGEMRWHQWTNRAIVDRQGKIIEFQ 236 Query: 120 ALVRDASV------------------------------------EMAQKEQTRQLIIAVD 143 A+ RD + E A E + V+ Sbjct: 237 AVGRDITELKQIETALRELNEELEQRVEQRTLQLEAQIQERQAVEKALMESEAKYERLVE 296 Query: 144 HLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLW 203 L + P + + C+ + GY E PE + +Q+ + Sbjct: 297 RLPAVIYQFSPTKGKLYCSSYVKSILGYSTDEIDLPWLWINSIHPEDLPKVKEMIQEFV- 355 Query: 204 KTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILA 263 + + E+ + G+ WI + DITE ++ + Sbjct: 356 QGKNFEIEYRVKDAQGQWHWILDRSIGRQAADQE-MMIEGVAIDITETKKTQMALQQAHQ 414 Query: 264 ----AMCSSPPFHEMGEIICRN------IESVLNESHVSLFA----------LRNGMPIH 303 + +SP + R E + + + I Sbjct: 415 CLTFHVDNSPLGVIEWDNDYRVKRWSSQAEKIFGWKEEEVVGKGWQEWQFVYEEDLDLIV 474 Query: 304 WASSSHGAEIQNAQSWSATIRQRDGAPA---GILQIKTSSGAETSAFIERVADISQHMAA 360 S + + + + G ++ E + + V D+S Sbjct: 475 AKVSEIIKKETSRHFVTNRNYTKTGEIIDCKWYNSVQYDQSGEILSILSLVLDVS----- 529 Query: 361 LALEQEKSRQHIE 373 EQ+++ ++ Sbjct: 530 ---EQKRAEAALQ 539 Score = 81.6 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 57/158 (36%), Gaps = 6/158 (3%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 +K ++ F A+ + ++ E+ E++ N A +L GY E++ I Sbjct: 905 LKAQQKLQESENRFRRAVIDAPLPILIHAEDGEIIQVNHAWTELTGYTHEDI--PTIADW 962 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS--AEGKVYY 118 + E K + E + K G F+ + + A+ + Sbjct: 963 TEKAYGERKEIVRSVIDELYKIDGKVEEGEFTITIKTGETRIWNFSSAPLGRLADNRRLI 1022 Query: 119 LALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDP 154 +++ D + +EQ R + + L +++LD Sbjct: 1023 MSMALDITERKQAEEQLRHAAVHDQLTGLPNRILLLDR 1060 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 807 bits (2086), Expect = 0.0, Method: Composition-based stats. Identities = 171/684 (25%), Positives = 312/684 (45%), Gaps = 39/684 (5%) Query: 137 QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRI 196 Q +++ + + V+ + I+ NR + E GY ++ + + LL+ +F D + Sbjct: 2 QYADLLENSNDLIQVVGFDGRIIYANRMWQETLGYGKNDLTQLNFFDLLHA-DFHCDCQD 60 Query: 197 RLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQ 256 R+Q+L+ + E TR G KI + SIS +Y + F DIT ++ + Sbjct: 61 RIQRLMSGETVPRFEVEYKTRYGHKIIAEGSIS-LYKENGEPCGIQGFFRDITARKKTEK 119 Query: 257 LEGNILAAMCSSPPFHEMGEII----------CRNIESVLNESHVSLF--------ALRN 298 + G + + L + L + Sbjct: 120 ALQTSEERFRTIYESSVAGIAMLAPDGHFLQANSAFCNFLGYNEEELLQMKITDVTHPDD 179 Query: 299 GMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGI---LQIKTSSGAETSAFIERVADIS 355 + A ++ ++DG+ + + + DI+ Sbjct: 180 IEDTLSRRNIARANRLHSIVCEKRYIRKDGSVFWAQLSSTWFFDANGNPLYTVPVIQDIT 239 Query: 356 QHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGV 411 + ++++ + I +L +D +TGL NR ++ LD ++ ++ + + + Sbjct: 240 R--------RKEAEERIRELAYYDSLTGLANRTLFNDRLDQVMARSRRRQSRFALMFLDL 291 Query: 412 DHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQI 470 D + V D+LG+A D L + R E L+ + + R+ G +FV++ + + +N+ ++ Sbjct: 292 DRFKGVNDTLGHAVGDAMLRQAAERLNECLRENDTVARLGGDEFVIILSDYKEDANLPRV 351 Query: 471 ADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQ 528 AD++ +S P + + + S+GI+ D G LL A AM +++GG+ ++ Sbjct: 352 ADKILKALSSPFDLGVREVYSSTSVGIAIYPDDGDEATDLLRHADMAMYAAKESGGDTFR 411 Query: 529 FFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGH 588 F+S MN R+ + A L+ A+ + + YQPQI T ++ G+EAL RW P G Sbjct: 412 FYSSEMNARAVSRMDMEANLRRALEQEEFFIEYQPQIDLITNKVAGVEALLRWQHPQLGV 471 Query: 589 VPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPN 648 +PP++FI LAEE I +G WV+ Q W+ + + +N+S F + Sbjct: 472 IPPTQFIGLAEETNLILPLGEWVMRRVFEQCVMWKQEGYLPFRVGINVSGRQFVQPDFVD 531 Query: 649 QVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSR 708 V + G L EITES++M+ ++ L+ +G+ +++DDFGTG+S LS Sbjct: 532 MVCRLLDETGAAPELLEFEITESVVMKDVDAAVLTLEALKKLGINMAIDDFGTGYSSLSC 591 Query: 709 LVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKI 768 L LP+ +KIDKSF+ A++EA ++ + L L V AEGVET+ Q+ ++K Sbjct: 592 LKHLPLNRLKIDKSFISDLQDNADDRAIVEATIAMAKRLELGVTAEGVETEGQYGFVQKR 651 Query: 769 HCRVIQGYFFSRPLPAEEIP-GWM 791 C +QG++FSRPL E+ W+ Sbjct: 652 ECDEVQGFYFSRPLSPSEVADAWL 675 Score = 168 bits (426), Expect = 9e-40, Method: Composition-based stats. Identities = 43/298 (14%), Positives = 94/298 (31%), Gaps = 19/298 (6%) Query: 13 IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEY 72 + LE + ++ + +++ N ++ GY + ++ N L+ D + Sbjct: 2 QYADLLENSNDLIQVVGFDGRIIYANRMWQETLGYGKNDLTQLNFFDLLHADFHCDCQDR 61 Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV-YYLALVRDASVEM-- 129 I+ G E++ + + G KI ++S G+ RD + Sbjct: 62 IQRLMSGETVP----RFEVEYKTRYGHKIIAEGSISLYKENGEPCGIQGFFRDITARKKT 117 Query: 130 --AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI 187 A + + + + +L P+ H +Q N AF GY E M+ + + Sbjct: 118 EKALQTSEERFRTIYESSVAGIAMLAPDGHFLQANSAFCNFLGYNEEELLQMKITDVTHP 177 Query: 188 PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSD 247 + R + E + + G W + S + +D + V D Sbjct: 178 DDIEDTLSRRNIARANRLHSIVCEKRYIRKDGSVFWAQLSSTWFFDANGNPLYTVPVIQD 237 Query: 248 ITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWA 305 IT ++ + + ++ N+ + A +A Sbjct: 238 ITRRKEAEERIR----------ELAYYDSLTGLANRTLFNDRLDQVMARSRRRQSRFA 285 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 38/228 (16%), Positives = 79/228 (34%), Gaps = 19/228 (8%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 K A ++ F E ++ G ++ + + N A GY EE++ I + Sbjct: 116 KTEKALQTSEERFRTIYESSVAGIAMLAPDGHFLQANSAFCNFLGYNEEELLQMKITDVT 175 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA--EGKVYYL 119 D R R+ + E + +KDGS W + + + +Y + Sbjct: 176 HPDDIEDTLSRRNIARA---NRLHSIVCEKRYIRKDGSVFWAQLSSTWFFDANGNPLYTV 232 Query: 120 ALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIVQCNR----AFTEMFGYCI 173 +++D + +E+ R+L + L + D ++ +R F MF + Sbjct: 233 PVIQDITRRKEAEERIRELAYYDSLTGLANRTLFNDRLDQVMARSRRRQSRFALMF-LDL 291 Query: 174 SEASGMQP-------DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLL 214 G+ D +L + +R + + D+ +L Sbjct: 292 DRFKGVNDTLGHAVGDAMLRQAAERLNECLRENDTVARLGGDEFVIIL 339 >UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAF7_MAGSM Length = 951 Score = 807 bits (2086), Expect = 0.0, Method: Composition-based stats. Identities = 178/693 (25%), Positives = 312/693 (45%), Gaps = 34/693 (4%) Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLD--PERHIVQCNRAFTEMFGYCISEAS-GMQPDTLL 185 +E + V+ + V ER +V + ++ G + + G L Sbjct: 251 RVLRENDARFQALVESIHAGVYRTQVTLERRLVYASAQMHQVAGLSMQQCQEGGVSLKSL 310 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 +PE + L+ + + ++ + ++W+ + D Sbjct: 311 VVPEDWPHVQEALEWSIKTHVPYEMQYRINHPQRGEMWVSDRGRIIKDHQGQPCWFDGAL 370 Query: 246 SDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESHVSLFAL--- 296 +I E R+ Q + ++ + + E + + Sbjct: 371 LNIHEARETEQQLLLAKQVVQTASEAIVITNHKNQIMDVNPAYERITGFMRHEVLGRNPK 430 Query: 297 --RNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG---ILQIKTSSGAETSAFIE 349 ++G ++ + WS I R+R+G + + S F+ Sbjct: 431 ITQSGRHDASFYATMWKHLVGEGHWSGEIWDRRRNGEIFPKWLAISAIRNRQGVISHFVG 490 Query: 350 RVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PV 405 DIS+ Q+ + Q +E+L+ +DP+T LPNR + L V A Sbjct: 491 VFNDISR--------QKSTEQQLERLVFYDPLTQLPNRVLFRDRLIHEVGVAERSNKLMS 542 Query: 406 VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDV 464 + L+ +D + + D+LG+ D+ LL+V R ++ + R+ G +F ++ Sbjct: 543 LLLVDLDRFKIINDTLGHGVGDELLLQVSKRLIASVRKSDTVARLGGDEFAIILPGMERA 602 Query: 465 SNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKN 522 + +A+ + N + P I++ + SIGI+ G + D L A AM +++ Sbjct: 603 EDAAHVAETIINQLQVPFSIEENELFVGASIGIAVHGQDGDDYDSLTMNADAAMFKAKES 662 Query: 523 GGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWH 582 G ++FF+P MN +RLV+ A L+ A+ N +L L YQP++ AE+ ++ G+EAL RW Sbjct: 663 GKGTYKFFTPDMNIQNAKRLVMEAELRRAVDNQELMLHYQPKVDAESRQIVGMEALVRWV 722 Query: 583 DPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFR 642 P G +PP FIPLAEE G I +G V+ AC Q+ +W + ++VNLS F+ Sbjct: 723 HPTRGVIPPGEFIPLAEETGLIVPLGELVLTRACAQVKQWWDMGLPQVQVAVNLSPRQFQ 782 Query: 643 SNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTG 702 L +VS+ + G L +EITES+ M + ++ L+D+GV +S+DDFGTG Sbjct: 783 EPNLIEKVSEILRKTGFPATGLELEITESIAMHDVDNTIETVKKLKDLGVRISIDDFGTG 842 Query: 703 FSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQF 762 +S LS L P+ +KID+SFV + +++ +I S+ +++ L VVAEGVET +Q Sbjct: 843 YSSLSYLKKFPLHALKIDQSFVRDLGGDDDGASIISSIISMAKAMALGVVAEGVETAQQM 902 Query: 763 EMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 E LR C+ +QG+F S+PLP + + Sbjct: 903 EFLRGQECQQVQGFFLSKPLPPSDFLALLERQQ 935 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 33/260 (12%), Positives = 83/260 (31%), Gaps = 11/260 (4%) Query: 7 DNAADGIFFPALEQNMMGAVLI--NENDEVMFFNPAAEKLWGYKREEVI--GNNIDMLIP 62 D F +E G +++ + ++ G ++ G ++ L+ Sbjct: 253 LRENDARFQALVESIHAGVYRTQVTLERRLVYASAQMHQVAGLSMQQCQEGGVSLKSLVV 312 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKVYYL-A 120 + P +++ E + ++ ++W + +G+ + Sbjct: 313 PEDWP----HVQEALEWSIKTHVPYEMQYRINHPQRGEMWVSDRGRIIKDHQGQPCWFDG 368 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 + + ++Q V +++ + + I+ N A+ + G+ E G Sbjct: 369 ALLNIHEARETEQQLLLAKQVVQTASEAIVITNHKNQIMDVNPAYERITGFMRHEVLGRN 428 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 P + A + + L E R GE +IS + + + + Sbjct: 429 P-KITQSGRHDASFYATMWKHLVGEGHWSGEIWDRRRNGEIFPKWLAISAIRNRQGVISH 487 Query: 241 LVMTFSDITEERQIRQLEGN 260 V F+DI+ ++ Q Sbjct: 488 FVGVFNDISRQKSTEQQLER 507 Score = 101 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 64/160 (40%), Gaps = 10/160 (6%) Query: 1 MKLTDADNAADGIFFP--ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNID 58 + + +A + ++ V+ N +++M NPA E++ G+ R EV+G N Sbjct: 371 LNIHEARETEQQLLLAKQVVQTASEAIVITNHKNQIMDVNPAYERITGFMRHEVLGRNPK 430 Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV-- 116 + + + + G S E+ +++G A+S + V Sbjct: 431 ITQSGRHDASFYATMWKHLVGE----GHWSGEIWDRRRNGEIFPKWLAISAIRNRQGVIS 486 Query: 117 YYLALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDP 154 +++ + D S + + ++Q +L+ + L V+ D Sbjct: 487 HFVGVFNDISRQKSTEQQLERLVFYDPLTQLPNRVLFRDR 526 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 806 bits (2084), Expect = 0.0, Method: Composition-based stats. Identities = 158/603 (26%), Positives = 277/603 (45%), Gaps = 40/603 (6%) Query: 219 GEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE-- 276 G ++ + + + + L+ ++I E R + A+ SS + + Sbjct: 368 GHRLLQEERTAELAGANSALE------TEIAEHRDAEEALRQRQRAIDSSSNGIMITDAL 421 Query: 277 -------IICRNIESVLNESHVSLFALR-------NGMPIHWASSSHGAEIQNAQSWSAT 322 + E + + + + + Sbjct: 422 ELDHPIIYVNPAFERITGYAASEVLGRNPRLLCSGDREQLGLEVIRVALCELREGHAELR 481 Query: 323 IRQRDGAPAG---ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFD 379 ++DG+ + ++ E + ++ V DI+ E+++ + +E D Sbjct: 482 NYRKDGSLFWNALSVSPVLNAAGEVTNYVGIVNDIT--------ERKRYEEQLEYQSNHD 533 Query: 380 PMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVN 435 +TGLPNRN L + + + A V+ I +DH + + DSLG+ D+ L Sbjct: 534 GLTGLPNRNLLGDRIGQALTYAERYQRQTAVFFIDLDHFKFINDSLGHDMGDKLLQIAAR 593 Query: 436 RFREKLKPDQYLCRIEGTQFVLVSLENDV-SNITQIADELRNVVSKPIMIDDKPFPLTLS 494 R E ++ + R G +FV+V + V + ++A ++++ V +P I + ++ S Sbjct: 594 RLSECVRSIDTVARHGGDEFVIVLSDLAVSEDAAKVARKIQDAVCRPYQIGEHELVVSCS 653 Query: 495 IGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAI 552 GIS G + LL A AM ++ G N +QF++ +N++V RL + L+ A+ Sbjct: 654 TGISLYPKDGSDAQVLLKNADVAMYRAKQCGRNNFQFYTGDLNDIVLARLTMEKYLRRAL 713 Query: 553 SNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVI 612 ++ + YQP++ +G + G+EAL RW P G + P+ FIPLAEE G I IG WV+ Sbjct: 714 ERDEFLVHYQPKVDLLSGRITGMEALVRWQSPELGFISPASFIPLAEETGLIVAIGEWVL 773 Query: 613 AEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESM 672 AC Q W+ + ++VNLS FR L + V G+ + +E+ ES+ Sbjct: 774 RTACAQNKAWQDDGLPPMVVAVNLSPRQFRQEDLADTVHRIAEETGLAPRYIELEVVESL 833 Query: 673 MMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKR 732 +M+ + L+++GV L++DDFGTG+S LS L P +KID+SFV + Sbjct: 834 LMDDVDGAVAMLDALKELGVQLTMDDFGTGYSSLSYLKRFPFDMMKIDQSFVRDITRDPG 893 Query: 733 ILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 A++ + S+ +LNL VVAEG+ET+ Q LR + C +QG++FSRP+PA E + Sbjct: 894 SAAIVRTVISLAHTLNLRVVAEGIETEGQLGYLRGLACDEMQGFYFSRPVPAAEFEQMLR 953 Query: 793 SVL 795 Sbjct: 954 DQR 956 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 92/252 (36%), Gaps = 10/252 (3%) Query: 120 ALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDP---ERHIVQCNRAFTEMFGYCISEA 176 AL + + +E RQ A+D +++ D + I+ N AF + GY SE Sbjct: 386 ALETEIAEHRDAEEALRQRQRAIDSSSNGIMITDALELDHPIIYVNPAFERITGYAASEV 445 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 G P LL + ++ L + E + G W S+SPV + Sbjct: 446 LGRNP-RLLCSGDREQLGLEVIRVALCELREGHAELRNYRKDGSLFWNALSVSPVLNAAG 504 Query: 237 HLQNLVMTFSDITEERQIRQLE--GNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLF 294 + N V +DITE ++ + + + P + +G+ I + + + Sbjct: 505 EVTNYVGIVNDITERKRYEEQLEYQSNHDGLTGLPNRNLLGDRIGQALTYAERYQRQTAV 564 Query: 295 ALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADI 354 + + + S G ++ + R+ I + G E F+ ++D+ Sbjct: 565 FFIDLDHFKFINDSLGHDMGDK-LLQIAARRLSECVRSIDTVARHGGDE---FVIVLSDL 620 Query: 355 SQHMAALALEQE 366 + A + ++ Sbjct: 621 AVSEDAAKVARK 632 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 65/173 (37%), Gaps = 15/173 (8%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINE---NDEVMFFNPAAEKLWGYKREEVIGNNID 58 +A A++ + G ++ + + +++ NPA E++ GY EV+G N Sbjct: 396 DAEEALRQRQ----RAIDSSSNGIMITDALELDHPIIYVNPAFERITGYAASEVLGRNPR 451 Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKV 116 +L D E IR + EL+ +KDGS W ++S V +A Sbjct: 452 LLCSGDREQLGLEVIRVALC----ELREGHAELRNYRKDGSLFWNALSVSPVLNAAGEVT 507 Query: 117 YYLALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIVQCNRAFTE 167 Y+ +V D + +EQ + L ++ D + + Sbjct: 508 NYVGIVNDITERKRYEEQLEYQSNHDGLTGLPNRNLLGDRIGQALTYAERYQR 560 >UniRef50_C7RN47 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RN47_9PROT Length = 1542 Score = 806 bits (2083), Expect = 0.0, Method: Composition-based stats. Identities = 190/822 (23%), Positives = 346/822 (42%), Gaps = 46/822 (5%) Query: 1 MKLTDADNAADGIFFPALEQNMM-GAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDM 59 +++ A+ +++ ++ ++++ N + FN AA +L+ + G ++ Sbjct: 730 LQIKTAETQELNTELESIQNSVDYPLLVLDRNASLQRFNSAAARLFKLGAAQ-TGRHLRD 788 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL 119 L P ++H + AR + Q+ + A + + Sbjct: 789 LPLPPDMPDLLADVQHVIDTQNAR------DRQIVNANRRHYALHIAPLLRDTQRIAGVI 842 Query: 120 ALVRDASV----EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 L D + E + +E +L +++ + V D N F + FG+ E Sbjct: 843 LLFADNTSLYEVERSARETQVRLQAVMNNSVSLMAVKDAPGRYQFANPKFEQTFGFATGE 902 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL 235 G L L+ + + +++E L L + P++D Sbjct: 903 VIGKTDLQLFPEAVSDLFRESELEAIRLRKGIEREESLPLAA--GERHFLVVRFPLFDDD 960 Query: 236 AHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNES 289 + L +DIT ++ + + + + I + ++ + Sbjct: 961 GAITGLCFQATDITARKRAEEQLRLAALVFDRASEGVMVTDTEQRILTINDSFSTLTGYT 1020 Query: 290 HVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQ---IKTS 339 + LR+ + ++ W I R+++G P Sbjct: 1021 RQEVVGKTPRLLRSDRMPREFYAEMWDKVTRLGVWQGEIWNRRKNGEPYLEWLSINTVKD 1080 Query: 340 SGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD 399 + ++ +DI++ +S+Q IE L D +TGLPNR ++ L+ + Sbjct: 1081 KNGKVVNYVGMFSDITKV--------RESQQRIEYLATHDELTGLPNRALFNDRLNLALA 1132 Query: 400 KAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF 455 A V I +D+ + V D+LG+ D+ L + R E ++ + + R+ G +F Sbjct: 1133 HAERSRESVGVVFIDLDNFKVVNDTLGHETGDKLLKQAAMRLLECVRAEDTVARLGGDEF 1192 Query: 456 VLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAH 513 V++ + D T A+ L +S + ++ SIG+S + + L+ A Sbjct: 1193 VVLLVNADRQQATLTAERLLTGLSTSYHFGEHECFISASIGLSMFPEDASDANSLMRNAD 1252 Query: 514 NAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELY 573 +AM + +G NG++FFS + +RL L L+ AI N +L + YQPQ+ E + Sbjct: 1253 SAMYRAKDHGKNGFRFFSADLASQASKRLALETGLRRAIENGELFVHYQPQVRLECDTVV 1312 Query: 574 GIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALS 633 G EAL RW + P FIP+AE+ I I WV+ EACRQ+ EW + +S Sbjct: 1313 GAEALVRWRY-NGEVIDPVVFIPIAEQSHLIFAIDDWVLGEACRQIIEWDRAGLPPLRIS 1371 Query: 634 VNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVG 693 VN+SA HFR + + + D + A G+ +L +EITE ++M + + L + G+ Sbjct: 1372 VNISARHFRKDGMAADLMDIVSAHGVSPQRLCIEITEGVLM-DVDRAQRMLAELVESGLR 1430 Query: 694 LSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVA 753 +S+DDFGTGFS LS L P+ E+KI +SFVD T+ A+ I S+ + L ++VV Sbjct: 1431 ISIDDFGTGFSSLSYLKRFPIHELKIARSFVDGISTDADDRAIASVIISLARQLGMSVVG 1490 Query: 754 EGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 EG+E Q L C QG+ +++PL + W+ + Sbjct: 1491 EGIERTGQHAELEAFGCHRGQGFLYAQPLAPDAFADWVLART 1532 >UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellular organisms RepID=Q5P8Z7_AZOSE Length = 1008 Score = 806 bits (2083), Expect = 0.0, Method: Composition-based stats. Identities = 197/805 (24%), Positives = 331/805 (41%), Gaps = 36/805 (4%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 A L+ GA ++ + + +FNPA E+ +G G + Sbjct: 178 LAAERTRLQGILDALPDGAYIVGADHVIEYFNPALERQFGAPA----GRKCFEYLHGRSE 233 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDAS 126 G + E + G F + + +G + + D + Sbjct: 234 ACTWCNNDAVFAGASLQAEWTA-------PSGRSYDL-FEMPFRNPDGTLSKFEIFHDIT 285 Query: 127 VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 + Q + + ++ + G+ + + L + Sbjct: 286 PVKESRRQLAEATLL---AHVGYWEWQLPAGVLHWGEQTDRLLGHAPGKVTPSGATFLAH 342 Query: 187 -IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 P+ + EF L+ G +A+ YD + Sbjct: 343 VHPDDRERVAGEFAGAVRNQCSYVSEFRLIRADGALRIARANGHLQYDREGRAVRVCGAI 402 Query: 246 SDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVL---NESHVSLFALRNGMPI 302 DITE R N + I R + N+ + F + I Sbjct: 403 QDITELRATETALRNSEERFSIAMTAAPFAVAITRVEDGRFVEVNDKYELHFGWKREELI 462 Query: 303 HWASSS--HGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFI--ERVADISQHM 358 S + ++ Q W + ++ G+ + R DI Sbjct: 463 GKTSVETNLWPDPESRQRW-LEMLRQHGSVLDFETLGCERNGAVRQVSLSSRYIDIDGEK 521 Query: 359 -----AALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLI 409 ++++++ IE L D +TGLPNR + A + + Sbjct: 522 HVLTFVHDITDRKEAQARIEYLAHHDALTGLPNRVLFRDRFALATAWAERAHAKVALLFV 581 Query: 410 GVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVL-VSLENDVSNIT 468 +DH + + D+LG+ D L V R RE L+ + R+ G +F++ ++ D I Sbjct: 582 DLDHFKTINDTLGHPVGDGLLQGVALRLRECLRETDTVSRLGGDEFLIALTDIRDPQAIN 641 Query: 469 QIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNG 526 ++ + +++P ++ T+SIGI+ D G++ D LL A AM ++ G N Sbjct: 642 SATAKIFDTLTRPFELEGHELTNTMSIGIAIWPDDGEDFDTLLKNADTAMYQAKRAGRNT 701 Query: 527 WQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLH 586 W+F++ MN E+L L AL A+ N++ L YQPQI +G + G+EAL RWH Sbjct: 702 WRFYTEQMNANAVEQLQLRTALHSALENDEFLLHYQPQINLASGHVVGVEALLRWHWDKR 761 Query: 587 GHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQL 646 VPP RFIP AEE G I IG WV+ EAC Q W Q + ++VNLSA+ FR L Sbjct: 762 ELVPPDRFIPAAEESGLIVPIGDWVLREACMQAVRWTRQGLPELTIAVNLSAVQFRRGDL 821 Query: 647 PNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGL 706 V A+ G+D +L +E+TES+++ + + ++ L+ +GV LS+DDFGTG+S L Sbjct: 822 ERSVVRALSLSGLDPARLELELTESLLLVDTESVIETLRRLKSLGVRLSIDDFGTGYSSL 881 Query: 707 SRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLR 766 + L V ++KID+SFV T+ A++ AI S+ +L L V+AEGVE+++ L Sbjct: 882 AYLKRFAVDKLKIDQSFVRDIATDPDDAAIVRAIVSMAHTLKLQVIAEGVESEDIDRFLH 941 Query: 767 KIHCRVIQGYFFSRPLPAEEIPGWM 791 +C QGY ++RP+P + + W+ Sbjct: 942 IFNCDEAQGYHYARPMPGDALAEWL 966 Score = 88.5 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 57/169 (33%), Gaps = 8/169 (4%) Query: 1 MKLTD-ADNAADGIFFPALEQNMMGAVLIN-ENDEVMFFNPAAEKLWGYKREEVIGNNID 58 ++ T+ A ++ F A+ + E+ + N E +G+KREE+IG Sbjct: 408 LRATETALRNSEERFSIAMTAAPFAVAITRVEDGRFVEVNDKYELHFGWKREELIGKTSV 467 Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYY 118 PE + E + + E +++G+ + + +G+ + Sbjct: 468 ET----NLWPDPESRQRWLEMLRQHGSVLDFETLGCERNGAVRQVSLSSRYIDIDGEKHV 523 Query: 119 LALVRDASVEMAQKEQTRQL--IIAVDHLDRPVIVLDPERHIVQCNRAF 165 L V D + + + L A+ L V+ D Sbjct: 524 LTFVHDITDRKEAQARIEYLAHHDALTGLPNRVLFRDRFALATAWAERA 572 Score = 86.6 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 54/392 (13%), Positives = 107/392 (27%), Gaps = 47/392 (11%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 A + + L +G V ++ V F+ A E + + + G + + Sbjct: 52 AALANLNRDYDHLLASTKIGTVFLDAGLRVRRFSAAVEDVLALRASDA-GRPLAEIT--- 107 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLALV 122 R + + EG RE+ D W + EG V + Sbjct: 108 YRAGDASRFLADLQHVATTGEGREREV-----DVGGRWYLERMLPFHGEGGVRDGVVLTY 162 Query: 123 RDA-------SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 D + + +L +D L ++ + I N A FG Sbjct: 163 TDINRVKTAQTEVAVLAAERTRLQGILDALPDGAYIVGADHVIEYFNPALERQFGAPA-- 220 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL 235 G + L+ ++ A Q E+ +G P + Sbjct: 221 --GRKCFEYLHGRSEACTWCN--NDAVFAGASLQAEWT--APSGRSY--DLFEMPFRNPD 272 Query: 236 AHLQNLVMTFSDITEERQIRQLEGN---------ILAAMCSSPP--FHEMGEIICRNIES 284 L F DIT ++ R+ + + + ++ Sbjct: 273 GTLSKF-EIFHDITPVKESRRQLAEATLLAHVGYWEWQLPAGVLHWGEQTDRLLGHAPGK 331 Query: 285 VLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIR--QRDGAPAGILQ---IKTS 339 V S + A + + ++N S+ + R + DGA ++ Sbjct: 332 VTP-SGATFLAHVHPDDRERVAGEFAGAVRNQCSYVSEFRLIRADGALRIARANGHLQYD 390 Query: 340 SGAETSAFIERVADISQHMAALALEQEKSRQH 371 + DI++ A + S + Sbjct: 391 REGRAVRVCGAIQDITELRATETALR-NSEER 421 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 806 bits (2083), Expect = 0.0, Method: Composition-based stats. Identities = 191/870 (21%), Positives = 337/870 (38%), Gaps = 94/870 (10%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 + + ++ + L + + N + L G L Sbjct: 119 LRSMLNLLRKLIDASPDYICLKDGAGRWLHANTSGLSLLHLNGVNTQGKTDRELADL-TH 177 Query: 67 PAHPEYIRHNREGGKARVEGMSR---ELQLEKKDGSKIWTRFALSKVSAEGKVY-YLALV 122 P ++++H + + E E + G ++ + +G + + L Sbjct: 178 PNLRDFMQHWQAADEYVWETGQLLREEETVPLPGGDRVLDVIKVPLFHDDGSRHGIVTLG 237 Query: 123 RDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE---ASGM 179 RD + + Q RQ +D L +L + E+ G A Sbjct: 238 RDITDRKQVESQLRQRSAILDALISCDWLLHSSESWQKVAVGVLELLGLASHASRAALLK 297 Query: 180 QPDTLLNIPEFPADNRIRLQQLLW-KTARDQDEFLLLTRTGEKIWIKA--SISPVYDV-- 234 + E P + K D + R G W+ SP++ Sbjct: 298 NSSDI--EAEAPISELLHHWNAPGFKPLSDGYHCIDYLRDGCSRWLNILQQGSPIFGNAD 355 Query: 235 -------------------------LAHLQNLVMTFSD---------------------- 247 AH ++M D Sbjct: 356 DFPPDERRFLLNHDSQSFVIIPIFVHAHWWGVIMIERDHAASTVTSQELGALMSIGRSFG 415 Query: 248 -ITEERQIRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNESHVSLFA----- 295 + A S+ + + I + + + + Sbjct: 416 VAIQRESSDHRLHQAKIAFESTAEGIFITDDELRTIAINQGFTDITGYTEDDVLGNIPNV 475 Query: 296 LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGIL---QIKTSSGAETSAFIER 350 L + + W ++++ + + ++ Sbjct: 476 LEADLKKPEPHREIWKALTREGRWRGEFWNQRKNNEQYAEWVTLTAVNNEEGKVINYVGV 535 Query: 351 VADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVV 406 ADIS E + S+ + +L+ DP+TGLPNR +H LD + A + Sbjct: 536 FADIS--------EIKHSQSRLNELVNRDPLTGLPNRRLMHELLDHAIKYAEREQNEIAL 587 Query: 407 YLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL-ENDVS 465 + +D + + D+LG+ D+ L EV R R ++ + R+ G +F+++ + Sbjct: 588 LFVDLDRFKAINDTLGHQMGDKLLFEVSQRIRAAVRDSDAVARLGGDEFIVMMDVLRERE 647 Query: 466 NITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNG 523 + ++A ++ + + +ID + ++ S+GIS D + D L+ A AM ++ G Sbjct: 648 DAAKVAKKIISSLQNEFLIDGRELFISASVGISVYPDDSLDVDGLIKAADIAMYQVKNKG 707 Query: 524 GNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHD 583 N F+S +++ ER L L+ A++ +Q ++ YQ Q+ ETG + G E+L RW Sbjct: 708 KNNHCFYSADLSQNAVERFTLENQLRRALARDQFEVYYQAQVSLETGRIIGAESLIRWIH 767 Query: 584 PLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRS 643 P G V P++FIPLAEE G I IG WV+ ++ Q+ EW Q I +SVN+S + + Sbjct: 768 PELGVVSPAKFIPLAEETGLIIPIGEWVLRQSAMQVKEWHDQGFDIDWVSVNVSGVQIQR 827 Query: 644 NQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGF 703 + + V + + H L +EITES +M + + ++ +GV L++DDFGTG+ Sbjct: 828 SNFADTVYGILVETDCESHLLELEITESTVMHNTEYVIDVFDRIKHLGVRLAIDDFGTGY 887 Query: 704 SGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFE 763 S LS L LP+ +IKID+SFV A+ AI ++ QSL TV+AEGVET++Q Sbjct: 888 SSLSHLKRLPLDKIKIDQSFVRDLPNNSDDAAIATAINAMAQSLGFTVIAEGVETRQQAS 947 Query: 764 MLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 L+KI C+ QGY +SRP+ A E + + Sbjct: 948 FLKKIGCQQGQGYLYSRPVTASEFTALLRA 977 Score = 75.8 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 37/279 (13%), Positives = 78/279 (27%), Gaps = 28/279 (10%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLI--NENDEVMFFNPAAEKLWGYKREEVIGNNID 58 M LT A +D I M G +I + + + +P ++ Sbjct: 1 MALT-AQTESDLIHQLL--HAMDGVAVIAFDAKLHIRYASPYGLQIL------------- 44 Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYY 118 L + + + + + S L +A Y Sbjct: 45 SLKSPSRAKLPASIGQRVLAELQKNNLKFTLQHAVGNALKSFCVQIATLEPATAGAD--Y 102 Query: 119 LALVRDASVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS 174 + ++D + A + + R L +D + + D + N + + Sbjct: 103 VLYMQDVTERFASEYELRSMLNLLRKLIDASPDYICLKDGAGRWLHANTSGLSLLHLNGV 162 Query: 175 EASGMQPDTL--LNIPEFPA--DNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISP 230 G L L P + + +W+T + E + G + P Sbjct: 163 NTQGKTDRELADLTHPNLRDFMQHWQAADEYVWETGQLLREEETVPLPGGDRVLDVIKVP 222 Query: 231 VYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSP 269 ++ +V DIT+ +Q+ A + + Sbjct: 223 LFHDDGSRHGIVTLGRDITDRKQVESQLRQRSAILDALI 261 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 804 bits (2079), Expect = 0.0, Method: Composition-based stats. Identities = 203/828 (24%), Positives = 354/828 (42%), Gaps = 59/828 (7%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDE-VMFFNPAAEKLWGYKREEVIGN---NI 57 +L A A+D E + + + + + N A +L+ + G + Sbjct: 428 ELVAAARASDAQ-RALFESIPLPLTVTSLSGHSLRHANGPALELF-MPDQTAAGLESWSP 485 Query: 58 DMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVY 117 +I + + EL L W++ ++ VS +G+ Sbjct: 486 FDVIAGENQRET------FLSLLVEEKNIDEYELLLRLPGAPCFWSQVSVRPVSYQGEQA 539 Query: 118 YLALVRDASVEMAQKE----QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCI 173 L L ++ +E + A+D L +L + I+ NR F + Sbjct: 540 LLTLFTPINLRKHLEEGVRNEKAFSQAALDSLPGIFFMLGSDFRILSTNRNFDR---FRE 596 Query: 174 SEASGMQPDTLLNIPEFPADNRIRLQQLLWKT---ARDQDEFLLLTRTGEKIWIKASISP 230 + + G ++ FP D R +++ ++ + E L + +I++ S Sbjct: 597 TTSPGSPFSSI--ELHFPPDQREKIRSMVQGGFRRGAAEAEVSLQGSSSREIYLLTSRLF 654 Query: 231 VYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIES 284 + L+ DI+ R+ + + + + + + Sbjct: 655 LL---GGEDCLITVGIDISARRRAEATLELWGRVFECTSESIMITDAAQRIVSVNQAFCA 711 Query: 285 VLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQIK 337 + LR+ + I+ SW R ++G + + Sbjct: 712 TTGYRAEEIIGQSSLALRSDVHDGIYFRQLWRGIRKRGSWQGEFWCRHKNGEVSPQWMVV 771 Query: 338 T---SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYL 394 + +I DIS Q+ Q I+ + D +T LPNR L Sbjct: 772 NTVHDRQGTVTNYIALFTDISA--------QKSQEQRIQHIAHHDALTNLPNRLLCMERL 823 Query: 395 DDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRI 450 + +A V I +DH +++ DSLG+ D L+ NR ++ + R+ Sbjct: 824 ILALQQAHRNGRHVAVIFIDLDHFKNINDSLGHHVGDCVLVTAANRLSMGVRDGDTVSRL 883 Query: 451 EGTQFVLVS-LENDVSNITQIAD-ELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRD 506 G +FV++ D I +I L ++ +P + SIGIS G ++D Sbjct: 884 GGDEFVIILADIEDSHQIEEIMKHRLLPLMRQPYDAGGYELHCSCSIGISIFPEDGLDKD 943 Query: 507 YLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIF 566 LL A AM ++ G N + F++ +N +RL + +L++ I N+L L YQP++ Sbjct: 944 TLLRNADTAMYRAKEVGRNNYHFYTEELNSRAMQRLSIETSLRKGIERNELLLHYQPKLD 1003 Query: 567 AETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN 626 TG+ YG+EAL RW P HG + P FIP+AEE G I IG+ VI ACRQL+ W S Sbjct: 1004 LHTGKPYGLEALLRWQHPDHGMISPMEFIPIAEETGLIIPIGKQVIRNACRQLSRWSSVG 1063 Query: 627 IHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQI 686 + LS+N+SA+ FR + + + G+ H++ +E+TE+M+ME + ++ Sbjct: 1064 MSHICLSLNVSAVQFRDRRFVEDLVQLVREEGVSPHRIELELTETMLMEDAVRTIRVMET 1123 Query: 687 LRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQS 746 L+D G S+DDFGTG+S L+ L P+ +KID+SF+ L LA+++AI +G + Sbjct: 1124 LKDEGFLFSIDDFGTGYSSLNYLHRFPIDCLKIDRSFIRGMLERPADLAIIKAIIGLGHT 1183 Query: 747 LNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 L++ V+AEGVE ++++ LR C IQGYF +RPL E++P W+ + Sbjct: 1184 LDMQVIAEGVEKEDEYRALRAAGCDGIQGYFVARPLTPEQVPEWLLAR 1231 >UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AX01_9CHRO Length = 1409 Score = 804 bits (2078), Expect = 0.0, Method: Composition-based stats. Identities = 189/830 (22%), Positives = 350/830 (42%), Gaps = 60/830 (7%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + + + +EQ + +++ +++ N EK+WG+ E L+ Sbjct: 601 QTQENLRQQQELLKTIVEQIPVMLAYFDQHYNLLWVNREWEKIWGWSLE---NRQKGDLL 657 Query: 62 PR-DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA 120 + + + + + + + + R+ ++ +DG I T +A K+S +A Sbjct: 658 AEFEPESEYRQSVLNYIKSAQGKW----RDFKILVRDGRIIDTSWANVKLSDGTS---IA 710 Query: 121 LVRDASVEMA----QKEQTRQLIIAVDHLDRPVIVLDPER-HIVQCNRAFTEMFGYCISE 175 + +D + +E + + D P+ V D E ++ N+A E +GY E Sbjct: 711 IGQDITERKRIEEILRESEEKYRLFFDANPNPLWVYDLETFAFLEVNQATIEHYGYTREE 770 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL 235 M + + P + LQ + ++ GE I ++ + + Sbjct: 771 FLAMTIRDIRPPEDVPLLEQYILQ--INPHFNRSGQWRHRKANGEIIDVEITSHGL--EY 826 Query: 236 AHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPP-------FHEMGEIICRNIESVLNE 288 A + ++ DITE + + + H I + + Sbjct: 827 AGRKARLVLAHDITERLKAEKALQESKERFHRAIVDAPLPILIHAEDGEIVQVNHAWTEL 886 Query: 289 SHVSLFALRNGMPIHWASSSHGAEIQN----------AQSWSAT--IRQRDGA---PAGI 333 S L L + +I + I + G Sbjct: 887 SGYHLDELSTIADWTEKAYGERKDIVRSVIDQLYEIDGKVEEGEFAITIKSGETRIWDFS 946 Query: 334 LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNY 393 I DI+ E++++ + + + D +TGLPNR L + Sbjct: 947 SAPLGKLADGRRLIISMAIDIT--------ERKQAEEQLRHSVLHDGLTGLPNRTLLLDR 998 Query: 394 LDDLVDKAVS-----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLC 448 ++ + + + I +D + V DSLG+ DQ L + ++ + ++P + Sbjct: 999 VEQAIKRKQQQPNYLFAILFIDLDRFKVVNDSLGHLVGDQLLKTIADKLQRCVRPTDTVA 1058 Query: 449 RIEGTQFVLVSLENDV-SNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNR 505 R G +FV++ + + ++ T++A + + ++ + + SIGI++ + Sbjct: 1059 RFGGDEFVILLEDLTIWTDATKMAQRITEEFESSFTLQEQEYFTSASIGITFCSSPEQTP 1118 Query: 506 DYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQI 565 L+ A AM ++ G + F P M+ + L L L+ A+ + + YQP + Sbjct: 1119 SELVRNADIAMYRSKEAGRARYTMFDPIMHTQATQLLELETNLRLALEREEFIVYYQPIV 1178 Query: 566 FAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ 625 L G EAL RW P G + P+ FIP+AEE G I +G WV+ E+CRQ+ W+ Q Sbjct: 1179 SLMNRNLLGFEALVRWIHPEKGVISPANFIPVAEETGLIIPLGEWVLRESCRQMKAWQEQ 1238 Query: 626 --NIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKR 683 +SVNLS + L N++ + + G++G L +EITESM+M + ++ + Sbjct: 1239 FIGAENLRVSVNLSGKQLQQPNLINRIDNILTETGLEGKNLKLEITESMLMNNKEQVSEL 1298 Query: 684 IQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSI 743 + ++ + +S+DDFGTG+S LS L LPV +KID+SFV R ++EAI ++ Sbjct: 1299 LLQMKAKKIQVSIDDFGTGYSSLSYLHYLPVDTLKIDRSFVSRMSQVGENFEIVEAIITL 1358 Query: 744 GQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 L + VVAEGVET++ L+++ C QGYFFS+PL +E+I W+ Sbjct: 1359 AHHLQMDVVAEGVETEQHLRQLQQLGCEFGQGYFFSKPLESEKIVSWLER 1408 Score = 137 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 64/454 (14%), Positives = 128/454 (28%), Gaps = 89/454 (19%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 ++ A A++ + +E + F N A + + V+ N LI Sbjct: 299 QIEAALRASESRYRGIVEDQSEFICRYRPGGTLTFVNQAYCRYFQKTPAAVLDNTFWDLI 358 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYL 119 + +P + N ++ E ++ G W ++ + E + + + Sbjct: 359 YSEDQPQ----VAQNIASLTPENPMITHEHRVRLSSGEIRWNQWTNRVIMDEKRNIIEFQ 414 Query: 120 ALVRDASVEMAQKEQTR------------------------------------------- 136 A+ RD + + R Sbjct: 415 AVGRDITQLKQVEAALRQLNEELEQRVEQRTAELAAEIRERQEIETALIKSQAKYEQLVE 474 Query: 137 -------QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY-CISEASGMQPDTLLNIP 188 +L +A++ + + + C+ + GY EA ++ P Sbjct: 475 KLSKSEERLQLALEGSGDTIWEWNLGTGELYCDPNWIRRLGYDPREEAINIEWWRSKIDP 534 Query: 189 EFPADNRIRLQQLLWK-TARDQDEFLLLTRTGEKIWIKASISPV-YDVLAHLQNLVMTFS 246 E +D+ L+ L T E+ + T GE +WI + YD ++ T Sbjct: 535 ETLSDHEAALENYLNGKTEYLALEYKIQTLEGEWLWIGGRGKCIAYDQQRKPLKILGTHR 594 Query: 247 DITEERQIRQLEGNILAAMCSSPPFHEMG----------EIICRNIESVLNESHVSLFAL 296 DITE +Q ++ + + + + R E + S + Sbjct: 595 DITETKQTQENLRQQQELLKTIVEQIPVMLAYFDQHYNLLWVNREWEKIWGWSLENRQKG 654 Query: 297 RNGMPIHWASSSHGAEI----QNAQSWSA-TIRQRDGAPAGILQIKTSSGAETSAFIERV 351 S + + W I RDG TS I Sbjct: 655 DLLAEFEPESEYRQSVLNYIKSAQGKWRDFKILVRDGRIIDTSWANVKLSDGTS--IAIG 712 Query: 352 ADISQHMAALALEQEKSRQHIE-----QLIQFDP 380 DI+ E+++ + + + FD Sbjct: 713 QDIT--------ERKRIEEILRESEEKYRLFFDA 738 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 57/398 (14%), Positives = 131/398 (32%), Gaps = 42/398 (10%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGY-KREEVIGNNIDML 60 +L + + ++ ALE + N ++ +P + GY REE I Sbjct: 471 QLVEKLSKSEERLQLALEGSGDTIWEWNLGTGELYCDPNWIRRLGYDPREEAINIEWWRS 530 Query: 61 -IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK---V 116 I + H + + G + E ++ E +++ +G +W ++ + + + Sbjct: 531 KIDPETLSDHEAALENYLNG---KTEYLALEYKIQTLEGEWLWIGGRGKCIAYDQQRKPL 587 Query: 117 YYLALVRDASVEMA----QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYC 172 L RD + ++Q L V+ + + D +++ NR + +++G+ Sbjct: 588 KILGTHRDITETKQTQENLRQQQELLKTIVEQIPVMLAYFDQHYNLLWVNREWEKIWGWS 647 Query: 173 ISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVY 232 + Q LL E ++ R + + +F +L R G I + + Sbjct: 648 LE---NRQKGDLLAEFEPESEYRQSVLNYIKSAQGKWRDFKILVRDGRIIDTSWANVKLS 704 Query: 233 DVLAHLQNLVMTFSDITEERQIRQLEGNILAA----MCSSPPFHEMGEI-------ICRN 281 D + DITE ++I ++ ++P + ++ + + Sbjct: 705 DG-----TSIAIGQDITERKRIEEILRESEEKYRLFFDANPNPLWVYDLETFAFLEVNQA 759 Query: 282 IESVLNESHVSLFALRNGMPIHWASSSHGAE--------IQNAQSWSATIRQRDGAPAGI 333 + A+ + + W R+ +G + Sbjct: 760 TIEHYGYTREEFLAMTIRDIRPPEDVPLLEQYILQINPHFNRSGQWRH--RKANGEIIDV 817 Query: 334 -LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQ 370 + A A + DI++ + A QE + Sbjct: 818 EITSHGLEYAGRKARLVLAHDITERLKAEKALQESKER 855 Score = 78.9 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 59/163 (36%), Gaps = 6/163 (3%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 +K A + F A+ + ++ E+ E++ N A +L GY +E+ + I Sbjct: 843 LKAEKALQESKERFHRAIVDAPLPILIHAEDGEIVQVNHAWTELSGYHLDEL--STIADW 900 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS--AEGKVYY 118 + + + + E + K G F+ + + A+G+ Sbjct: 901 TEKAYGERKDIVRSVIDQLYEIDGKVEEGEFAITIKSGETRIWDFSSAPLGKLADGRRLI 960 Query: 119 LALVRDASVEMAQKEQTRQ--LIIAVDHLDRPVIVLDPERHIV 159 +++ D + +EQ R L + L ++LD + Sbjct: 961 ISMAIDITERKQAEEQLRHSVLHDGLTGLPNRTLLLDRVEQAI 1003 Score = 75.0 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 24/178 (13%), Positives = 54/178 (30%), Gaps = 6/178 (3%) Query: 98 GSKIWTR--FALSKVSAEGKVYYLALV---RDASVEMAQKEQTRQLIIAVDHLDRPVIVL 152 G W ++ + Y++L R +E A + + V+ + Sbjct: 266 GRLFWLMSGLLITTILLMSLWRYISLRPFYRLQQIEAALRASESRYRGIVEDQSEFICRY 325 Query: 153 DPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEF 212 P + N+A+ F + L+ + P + L + E Sbjct: 326 RPGGTLTFVNQAYCRYFQKTPAAVLDNTFWDLIYSEDQPQ-VAQNIASLTPENPMITHEH 384 Query: 213 LLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPP 270 + +GE W + + + D ++ DIT+ +Q+ + + Sbjct: 385 RVRLSSGEIRWNQWTNRVIMDEKRNIIEFQAVGRDITQLKQVEAALRQLNEELEQRVE 442 >UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4D8_9PROT Length = 1138 Score = 804 bits (2077), Expect = 0.0, Method: Composition-based stats. Identities = 183/773 (23%), Positives = 322/773 (41%), Gaps = 50/773 (6%) Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYY 118 + D + + + + ++ + + + + + Sbjct: 372 EITSEDEFGELANAFNRMSHHLDRVYQNLEQRVTERTQELEILNQQIRANLLISRESQEK 431 Query: 119 LALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 LA S + +E Q +H V V D I N F ++ Y E G Sbjct: 432 LAASEAHSKRI-AEELQYQKFALDEHAI--VSVTDVTGTITDVNERFCQISQYSREELIG 488 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 +LN P + + + + DE + G W+ ++ P D Sbjct: 489 KN-HKMLNSGWHPKGFFKAMYRAITRGQVWNDEVCNRAKDGSLYWLDMTVVPFMDECGKP 547 Query: 239 QNLVMTFSDITEERQ----IRQLEGNILAAMCSSPPFHEMGEII--------------CR 280 + +DITE ++ I + E + S+ M ++ C Sbjct: 548 YKYIGIRTDITERKKSAEAIERSEAKLHILFDSNSDAVLMLDMQGFFDCNKAALRLFGCA 607 Query: 281 NIESVLNESHVSL--FALRNGMPIHWASSSHGAEIQNAQSWSATIRQR---DGAPAGILQ 335 E + + NG+ ++ + A + + G Sbjct: 608 TTEELCKHHPADMSPATQPNGIDSLTLANEYIATATRDGNAQFEWLHKRMDSGQSFPADV 667 Query: 336 IKTSSGAETSAFI-ERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYL 394 + +S + + V DI+ E++KS I +L +DP+TGLPNR L + L Sbjct: 668 LLSSMKLDGRVVLQATVRDIT--------ERKKSESEIVRLAFYDPLTGLPNRRLLMDRL 719 Query: 395 DDLV----DKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRI 450 + + I +D+ + + D+ G+A D L+EV R + ++ + + R+ Sbjct: 720 QHALTSNLRNDKHGAILFIDLDNFKSLNDTKGHAVGDLLLVEVAQRLKGCVREEDTVARL 779 Query: 451 EGTQFVLVSL------ENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LG 502 G +FV++ +N ++ ++A+++ ++ M+ + + SIG++ Sbjct: 780 GGDEFVVLLDNLSHGHDNAGAHTKRVAEKILQALNLSYMLQGYEYHSSPSIGVALFCADA 839 Query: 503 KNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQ 562 + D LL A +AM + G N +F+ ++ R L AL A+ QL L YQ Sbjct: 840 SSPDELLKRADSAMYQSKAAGRNTVRFYDERTQALLLARAELEHALHHALEQQQLMLYYQ 899 Query: 563 PQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEW 622 Q+ + G E L RW P+ G + P++FIPLAEE G I IG WV+ +AC QL W Sbjct: 900 VQVN-ADYQPVGAEVLLRWFHPVLGMISPAQFIPLAEESGMIIPIGYWVLEQACDQLKRW 958 Query: 623 R-SQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIF 681 L+VN+S F +V + GI +L +EITESM++ I Sbjct: 959 ASDVFKCDLVLAVNVSIRQFHEADFAQKVQALVTDSGISPDRLKLEITESMLVHDVENII 1018 Query: 682 KRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAIT 741 +Q L+ +G+ S+DDFGTG+S LS + LP+ ++KID+SFV ++ A++ I Sbjct: 1019 ATMQQLKKIGLNFSMDDFGTGYSSLSSIKRLPLDQLKIDQSFVRDIGHDEHDKAIVRTII 1078 Query: 742 SIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 ++ QS+ L ++AEG+ET++Q +L C QGY FS+P+P + G +S Sbjct: 1079 AMAQSMKLNIIAEGIETEQQRRLLALKGCTNYQGYLFSKPVPLSDFEGLLSRA 1131 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 52/280 (18%), Positives = 89/280 (31%), Gaps = 28/280 (10%) Query: 2 KLTDADNAADGIFFPALEQN---------MMGAVLINENDEVMFFNPAAEKLWGYKREEV 52 + + A++ E+ + + + N ++ Y REE+ Sbjct: 427 ESQEKLAASEAHSKRIAEELQYQKFALDEHAIVSVTDVTGTITDVNERFCQISQYSREEL 486 Query: 53 IGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA 112 IG N ML HP+ R + + E+ KDGS W + Sbjct: 487 IGKNHKMLNSGW----HPKGFFKAMYRAITRGQVWNDEVCNRAKDGSLYWLDMTVVPFMD 542 Query: 113 E-GKVY-YLALVRDASVEM----AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFT 166 E GK Y Y+ + D + A + +L I D V++LD + CN+A Sbjct: 543 ECGKPYKYIGIRTDITERKKSAEAIERSEAKLHILFDSNSDAVLMLDMQG-FFDCNKAAL 601 Query: 167 EMFGYCISEASGMQPDTLLNIPEFP-----ADNRIRLQQLLWKTARDQDEFLLLTRT-GE 220 +FG +E ++ P + Q E+L G+ Sbjct: 602 RLFGCATTEELCKHHPADMSPATQPNGIDSLTLANEYIATATRDGNAQFEWLHKRMDSGQ 661 Query: 221 KIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGN 260 +S + + L T DITE ++ Sbjct: 662 SFPADVLLSSMKL-DGRVV-LQATVRDITERKKSESEIVR 699 >UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax=cellular organisms RepID=Q607T2_METCA Length = 1346 Score = 804 bits (2077), Expect = 0.0, Method: Composition-based stats. Identities = 192/695 (27%), Positives = 314/695 (45%), Gaps = 34/695 (4%) Query: 121 LVRDASVEM---AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 L RDA E +E + +A + + + D R N + G + Sbjct: 645 LARDAERERSEMRLRESEERFRLAANSAPVLIWMGDTARGCTFFNDMWLNFTGRSLEYEL 704 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 G ++ + + E+ L R GE I +P +D Sbjct: 705 GDGWLEGMHPEDRSR-WICAYSAAFDARKPFEIEYRLRRRDGEYRTILGKATPRFDAGGE 763 Query: 238 LQNLVMTFSDITEERQIRQLE---GNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLF 294 + + DI++ ++ + G + A+ S + +I + + + S Sbjct: 764 FIGYIGSCIDISDRKKGDESLLLAGKVFEAVRESIIVTDANRVIVAVNPAFSDMTGYSPE 823 Query: 295 ALRNGMPIHWASSSH--------GAEIQNAQSWSATI--RQRDGAPAGI---LQIKTSSG 341 P S H + SW R+++G + + Sbjct: 824 EAVGRTPAFLQSGRHGKEYYAAMWRAVDQEGSWQGEFWNRRKNGELFAVLETIVTVRDET 883 Query: 342 AETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA 401 +I ADIS +++ +HI L +DP++ LPNR L + + A Sbjct: 884 GAMVNYIGVAADISS--------LKEAEEHIHHLAYYDPLSALPNRRYLMERAEYALALA 935 Query: 402 VS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVL 457 V + VDH +DV DSLG+ D+ L+ V + +E + + R+ G +F L Sbjct: 936 ERRKEELAVVFLDVDHFKDVNDSLGHQVGDELLVRVATQIKEFTRETDTVARLGGDEFAL 995 Query: 458 VSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNA 515 + + ++Q+AD++ + KP + F +T SIGIS G + + LL A A Sbjct: 996 LLPDLGRDAVSQVADKILAALRKPFEHSGQTFAVTGSIGISLYPHDGTDFETLLRNADTA 1055 Query: 516 MDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGI 575 M + ++ G N ++F+ P MN + RL + + L+EAI +L+ +QP+I G L G Sbjct: 1056 MYHAKQQGRNQFRFYDPGMNVDILARLTVLSELREAIPAGELRTFFQPEIDLANGTLVGA 1115 Query: 576 EALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVN 635 EAL RW P G + P +FIP+AE I I WV+ + CR LA+W+ + + VN Sbjct: 1116 EALVRWQHPTRGLLSPDQFIPVAESNDLIIAISDWVLEDTCRHLAQWKKADQAPITVGVN 1175 Query: 636 LSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLS 695 L+A HFR +L +V + +G+ G L +E+TES +++ D + +Q L +G LS Sbjct: 1176 LAARHFRDPRLVPRVKSLLCRYGVPGSSLQLELTESTLLDADAQTMIVLQELIALGCSLS 1235 Query: 696 VDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEG 755 +DDFGTG+S LS L +LP+ +KID+SFV + + + ++G SL L V+AEG Sbjct: 1236 IDDFGTGYSSLSYLKNLPIATLKIDQSFVRDIAFDADDRTISGTVVALGHSLGLKVIAEG 1295 Query: 756 VETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 VET+EQ +L + C QGY FSRPL ++E W Sbjct: 1296 VETEEQRRILLEQGCDFGQGYLFSRPLSSKEFIKW 1330 Score = 180 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 87/257 (33%), Gaps = 7/257 (2%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 ++ F A + + + FFN G E +G+ + + Sbjct: 657 RLRESEERFRLAANSAPVLIWMGDTARGCTFFNDMWLNFTGRSLEYELGDGWLEGMHPED 716 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVR 123 R +I AR + E +L ++DG + G + Y+ Sbjct: 717 RS---RWICAYSAAFDAR-KPFEIEYRLRRRDGEYRTILGKATPRFDAGGEFIGYIGSCI 772 Query: 124 DASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDT 183 D S E + + +IV D R IV N AF++M GY EA G P Sbjct: 773 DISDRKKGDESLLLAGKVFEAVRESIIVTDANRVIVAVNPAFSDMTGYSPEEAVGRTP-A 831 Query: 184 LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVM 243 L + + + + + Q EF + GE + +I V D + N + Sbjct: 832 FLQSGRHGKEYYAAMWRAVDQEGSWQGEFWNRRKNGELFAVLETIVTVRDETGAMVNYIG 891 Query: 244 TFSDITEERQIRQLEGN 260 +DI+ ++ + + Sbjct: 892 VAADISSLKEAEEHIHH 908 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 70/445 (15%), Positives = 123/445 (27%), Gaps = 89/445 (20%) Query: 3 LTDADNAADGI------FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNN 56 + A A F + +L + + ++ N A L+GY REE+ G Sbjct: 344 MQAALEAEKERADLSRRFEYFVRYANDAILLADRDHRIVDVNDRALDLYGYSREELAGMT 403 Query: 57 IDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV 116 + ++ D+ + G E +KDG + ++ +S EG Sbjct: 404 LADVVAGDVEGVEHGRLDEALARGGGVW-----ESVHTRKDGVPVPVELSVRSISVEGSD 458 Query: 117 YYLALVRDASVEMAQK---EQTRQLIIAVDHLDRPVI-------VLDPERHIVQCNRAFT 166 + A+VRD + + + + L + ++ ++ + D I N F Sbjct: 459 FVQAIVRDVTERKRIELALARQKNLYSLLAQTNQIIVRHTSEQELFDSVCRIAIRNGGFL 518 Query: 167 -EMFGYCISEA--------------------SGMQPDTLLNIPEF--------------- 190 G +E + P Sbjct: 519 FAWIGMIENETGDLVPVARYGDDAGYVGRLHLSRADTAHHHGPTRMAVAAGHHVISDDFL 578 Query: 191 -PADNRIRLQQLLWKTARDQDEFLLLTRT----------GEKIWIKASISPVYDVLAHLQ 239 R + L R F + GE+ + I V D +A Sbjct: 579 ADPLTRPWHEAGLAAGVRASGAFPIRRFGKVVGAINLYAGERGFFSEDIVAVLDTMAMDV 638 Query: 240 NLV--MTFSDITEER---QIRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNE 288 + + D ER ++R+ E A S+P MG+ + Sbjct: 639 SFALDILARDAERERSEMRLRESEERFRLAANSAPVLIWMGDTARGCTFFNDMWLNFTGR 698 Query: 289 SHVSLFALRNGMPIHWASSSHGAEIQNAQ-------SWSATIRQRDGAPAGIL---QIKT 338 S +H S +A +R+RDG IL + Sbjct: 699 SLEYELGDGWLEGMHPEDRSRWICAYSAAFDARKPFEIEYRLRRRDGEYRTILGKATPRF 758 Query: 339 SSGAETSAFIERVADISQHMAALAL 363 +G E +I DIS Sbjct: 759 DAGGEFIGYIGSCIDISDRKKGDES 783 Score = 92.7 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 34/262 (12%), Positives = 79/262 (30%), Gaps = 32/262 (12%) Query: 126 SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 E + + +R+ V + + +++ D + IV N +++GY E +GM ++ Sbjct: 349 EAEKERADLSRRFEYFVRYANDAILLADRDHRIVDVNDRALDLYGYSREELAGMTLADVV 408 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 ++ + L E + + G + ++ S+ + + + Sbjct: 409 AGDVEGVEHGRLDEALARGGGVW--ESVHTRKDGVPVPVELSVRSISVEGSDF--VQAIV 464 Query: 246 SDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWA 305 D+TE ++I ++ + + ++ + Sbjct: 465 RDVTERKRIELALARQKNLYS----------LLAQTNQIIVRHTSEQ----------ELF 504 Query: 306 SSSHGAEIQNAQ---SWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALA 362 S I+N +W I G + AD + H Sbjct: 505 DSVCRIAIRNGGFLFAWIGMIENETGDLVPV-ARYGDDAGYVGRLHLSRADTAHHHGPTR 563 Query: 363 LEQEKSRQHI--EQLIQFDPMT 382 + I + L DP+T Sbjct: 564 MAVAAGHHVISDDFLA--DPLT 583 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 803 bits (2076), Expect = 0.0, Method: Composition-based stats. Identities = 184/692 (26%), Positives = 320/692 (46%), Gaps = 33/692 (4%) Query: 128 EMAQKEQTRQLIIAVDHLDRPVIVLDPE-RHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 + E+ R L + + + + H ++ N +++ GY SE + +L Sbjct: 412 QRQTSEKDRLLKHFFELPLFGMAITHGQTGHWIRFNHQLSDLLGYSHSEMAEHTLLSLTA 471 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 AD Q E L + G+ I++ V ++ ++ Sbjct: 472 NEYQEADIAAMYQMTQDLCDGYLCEKQLRRKDGQLIYVNVDTRCVRTADRNIAFIISVIE 531 Query: 247 DITEERQIRQLEGNILAAMCSSPPFHEMGE---IICRNIESVLNESHVSLFALRNGMPIH 303 DI+ +++ + ++ + + I R + S L+ P+ Sbjct: 532 DISSQKENEAILRQSATVFDNTREGIMITDKNAQIIRVNPAFAELFGFSQHELQGKTPVI 591 Query: 304 WASSSHGAEIQNA--------QSWSATI--RQRDGAPAGIL---QIKTSSGAETSAFIER 350 + S H E W I R++D ++ + + + ++ Sbjct: 592 FKSGKHTHEFYQHIRDSLNTSAFWRGEIWNRRKDNHIIPLICSISAVRNDKQQLTHYVSV 651 Query: 351 VADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA----VSPVV 406 +DIS+ + S + L DP+T LPNR L L +D A + Sbjct: 652 YSDISK--------LKASEAKLAHLAHHDPLTQLPNRTLLTINLSHAIDLAVRNHHRIAL 703 Query: 407 YLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDV-S 465 ++ +D +DV DS G+ D L EV R R +++ +CR+ G +F ++ N Sbjct: 704 LMLDLDRFKDVNDSFGHQIGDALLQEVARRLRRRVRISDTICRLGGDEFTVLIEGNPALH 763 Query: 466 NITQIADELRNVVSKPIMI-DDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKN 522 ++ A+++ ++ P + + + + SIGIS G+ LL A AM + + Sbjct: 764 DVEHFAEDILQLLKDPFSLPNGREVIIGASIGISLYPEHGQTPKELLQQADAAMYRAKAH 823 Query: 523 GGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWH 582 G + +++FS + ++RL L L+ A+ N+L L +QPQI + + G EAL RW Sbjct: 824 GRSCFRYFSDELTRAAEQRLDLEVRLQRALRLNELCLYFQPQIDISSNRIIGAEALVRWQ 883 Query: 583 DPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFR 642 DP HG + P++FIP+AEE G I+ +G WV+ EACRQ EW+ + + L+VN+S + FR Sbjct: 884 DPAHGLISPAQFIPVAEETGLIKQLGEWVLLEACRQGKEWQQKGLPAINLAVNISPVQFR 943 Query: 643 SNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTG 702 ++ + V +A+ G L +E+TES +M H+ E + + LR G+ L++DDFGTG Sbjct: 944 NSNILESVFNALKQTGYPASLLELELTESALMTHENEAVEILSALRKYGIRLAIDDFGTG 1003 Query: 703 FSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQF 762 +S L+ L P+ +KIDKSFVD +K + + AI ++ +L L V+AEGVET+EQ Sbjct: 1004 YSSLAYLKRFPLDVLKIDKSFVDDIPHKKDDMEIAAAIVAMAHTLRLKVLAEGVETEEQL 1063 Query: 763 EMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 L++ C QGY S P+PA++ + + Sbjct: 1064 TFLKEQGCDCYQGYLMSPPVPADQFEQLLRAQ 1095 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 101/267 (37%), Gaps = 7/267 (2%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINEN-DEVMFFNPAAEKLWGYKREEVIGNNIDM 59 ++L + D + E + G + + + FN L GY E+ + + Sbjct: 409 LELQRQTSEKDRLLKHFFELPLFGMAITHGQTGHWIRFNHQLSDLLGYSHSEMAEHTLLS 468 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VY 117 L + + A + + +G E QL +KDG I+ V + + Sbjct: 469 LTANEYQEADIAAMYQMTQDL---CDGYLCEKQLRRKDGQLIYVNVDTRCVRTADRNIAF 525 Query: 118 YLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 ++++ D S + + RQ D+ +++ D I++ N AF E+FG+ E Sbjct: 526 IISVIEDISSQKENEAILRQSATVFDNTREGIMITDKNAQIIRVNPAFAELFGFSQHELQ 585 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 G P + + + ++ L +A + E + I + SIS V + Sbjct: 586 GKTPV-IFKSGKHTHEFYQHIRDSLNTSAFWRGEIWNRRKDNHIIPLICSISAVRNDKQQ 644 Query: 238 LQNLVMTFSDITEERQIRQLEGNILAA 264 L + V +SDI++ + ++ Sbjct: 645 LTHYVSVYSDISKLKASEAKLAHLAHH 671 >UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Proteobacteria RepID=A8H6Y6_SHEPA Length = 1064 Score = 803 bits (2076), Expect = 0.0, Method: Composition-based stats. Identities = 181/809 (22%), Positives = 350/809 (43%), Gaps = 43/809 (5%) Query: 13 IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEY 72 +F MG + + E + NP+ ++ Y +E++ + L+ D + + Sbjct: 205 LFKSHFHSGNMGIAITDIAHEWIKVNPSLCQMLKYTEQELLSLSWLDLMSADDFQLYKHH 264 Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLAL-VRDASVEMAQ 131 + +G R+ +L L KD + ++T ++ + +V + + + + Sbjct: 265 LLRMLDG---RINEFELDLCLIAKDETIVYTHMTVACQRVQSRVELIITGFLNRTSQKEA 321 Query: 132 KE----QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA--SGMQPDTLL 185 ++ QL + + + D I++ N + G I + Sbjct: 322 EKEKLASQEQLGLVLGSSELGFWDWDIRNDIIERNEHCAALLGCDIDTLNRQQKLWGDSI 381 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV-YDVLAHLQNLVMT 244 + + R L +T + + E+ + T E +WI S + D + Sbjct: 382 HPEDRVRVLRSIKAHLSGETEQHKVEYRIRTLASETLWILDSGKVMSRDESGCPLRMCGI 441 Query: 245 FSDITEERQIRQLEGNILAAMCSSPPFHEMGE---IICRNIESVLNESHVSLFALRNGMP 301 +DIT+ +++ + + +S + + +I + + + + ++N Sbjct: 442 HTDITDRKRVEESLKLAASVYNNSREAMSVQDDKGLIININAAFTDITGYTESEVKNQNI 501 Query: 302 IHWA--------SSSHGAEIQNAQSWSAT--IRQRDGAPAGILQIKT---SSGAETSAFI 348 ++ W +R+++G + + A+T + Sbjct: 502 KILQCSRNNRSAYEQMHMAVEEEGRWQGEVWLRRKNGEEFVVWLTLNALFDAEAQTQRHV 561 Query: 349 ERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV----DKAVSP 404 +DI+ E++++ + I + +D +TGLPNR L +YL+ + + Sbjct: 562 ALFSDIT--------EKKQAEKIIWKQANYDTLTGLPNRRMLLDYLNAEILKSDSREQHF 613 Query: 405 VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-ND 463 + + +D+ ++V D+LG+ D L E R + ++ + R+ G +F +V D Sbjct: 614 ALMFLDLDYFKEVNDTLGHDMGDMLLSEAAKRLKACIRDSDVVARLGGDEFTIVLSGVTD 673 Query: 464 VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRK 521 + + ++A + +++P + ++ ++ SIGI+ D + LL A AM + Sbjct: 674 IKGVDKVAKHILTRIAEPYNLGEETAYISASIGITLYPDDASTIEGLLKHADQAMYAAKD 733 Query: 522 NGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARW 581 G N + +F+P+M K R+ L L+ AI++++ +L YQP + + G EAL RW Sbjct: 734 EGRNRFHYFTPSMQRYAKYRMRLIQDLRSAIADHEFELYYQPIVSLQGGLGLKAEALIRW 793 Query: 582 HDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHF 641 P G V P FI +AEE G I IG WV +A RQ A WR + +S+N S + F Sbjct: 794 RHPKRGLVSPIEFIAVAEETGLIIEIGNWVFQQAARQSALWRDRFGIEVQISINKSPVQF 853 Query: 642 RSNQ-LPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFG 700 R N + + + + + +EITE ++++ ++ I ++ RD G+ +S+DDFG Sbjct: 854 RDEGESINSWVNLLKTLNLTNNNICIEITEGLLLDGNSAISSKLTQYRDSGIQISLDDFG 913 Query: 701 TGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKE 760 TG+S L+ L + +KID+SF + L EAI + L + V+AEGVET Sbjct: 914 TGYSSLAYLKKFDIDFLKIDQSFTRNLDSNSDDFTLCEAIIVMAHKLGMKVIAEGVETDY 973 Query: 761 QFEMLRKIHCRVIQGYFFSRPLPAEEIPG 789 Q ++L C QGY FSRP+P E+ Sbjct: 974 QRKILANAGCDFGQGYLFSRPVPVEKFEQ 1002 Score = 147 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 101/305 (33%), Gaps = 18/305 (5%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEV--IGNNIDM 59 + A+ L + +G + ++++ N L G + + Sbjct: 320 EAEKEKLASQEQLGLVLGSSELGFWDWDIRNDIIERNEHCAALLGCDIDTLNRQQKLWGD 379 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFA---LSKVSAEGKV 116 I + R +R + E E ++ +W + +S+ + + Sbjct: 380 SIHPEDR---VRVLRSIKAHLSGETEQHKVEYRIRTLASETLWILDSGKVMSRDESGCPL 436 Query: 117 YYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 + D + +E + ++ + V D + I+ N AFT++ GY SE Sbjct: 437 RMCGIHTDITDRKRVEESLKLAASVYNNSREAMSVQDDKGLIININAAFTDITGYTESEV 496 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 L + + + R Q E L + GE+ + +++ ++D A Sbjct: 497 KNQNIKILQCSRNNRSAYEQMHM-AVEEEGRWQGEVWLRRKNGEEFVVWLTLNALFDAEA 555 Query: 237 HLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFAL 296 Q V FSDITE++Q ++ A + N +L+ + + Sbjct: 556 QTQRHVALFSDITEKKQAEKII--WKQANYDTLTG-------LPNRRMLLDYLNAEILKS 606 Query: 297 RNGMP 301 + Sbjct: 607 DSREQ 611 Score = 74.6 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 32/285 (11%), Positives = 90/285 (31%), Gaps = 37/285 (12%) Query: 119 LALVRDASVEMAQKEQTR---QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 + L R +E QK + + + + + D ++ N + +M Y E Sbjct: 184 ILLSRRIEIERDQKIKLQDHLLFKSHFHSGNMGIAITDIAHEWIKVNPSLCQMLKYTEQE 243 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL 235 + L++ +F L+ L + + + L+ + ++ +++ V Sbjct: 244 LLSLSWLDLMSADDFQLYKHHLLRMLDGRINEFELDLCLIAKDETIVYTHMTVACQR-VQ 302 Query: 236 AHLQNLVMTFSDITEERQIRQLEGNILAAMCSSP--------PFHEMGEIICRNIE--SV 285 + ++ ++ F + T +++ + + + + +II RN ++ Sbjct: 303 SRVELIITGFLNRTSQKEAEKEKLASQEQLGLVLGSSELGFWDWDIRNDIIERNEHCAAL 362 Query: 286 LNESHVSL----------FALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGIL- 334 L +L + + + + +H + IR IL Sbjct: 363 LGCDIDTLNRQQKLWGDSIHPEDRVRVLRSIKAHLSGETEQHKVEYRIRTLASETLWILD 422 Query: 335 ---QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLI 376 + DI+ ++++ + ++ L Sbjct: 423 SGKVMSRDESGCPLRMCGIHTDIT--------DRKRVEESLK-LA 458 >UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WS3_RHOFD Length = 1034 Score = 803 bits (2076), Expect = 0.0, Method: Composition-based stats. Identities = 178/708 (25%), Positives = 304/708 (42%), Gaps = 46/708 (6%) Query: 118 YLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVL----DPERHIVQCNRAFTEMFGYCI 173 Y+ + R S AQ++ QL H+ V D + ++F Sbjct: 336 YVVIRRRHST--AQRQALVQLQSLTHHVPGVVFQYLLRPDGSSCFPFASAGLHKIFRLSP 393 Query: 174 SEASG-MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVY 232 + P L P+ A +Q DE+ + G W+ + +P Sbjct: 394 EAVAQDAAPLFALMHPDDAAGVAASIQASSRALTPWVDEYRVKFGDGTVRWLSSKAAPQK 453 Query: 233 DVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE------IICRNIESVL 286 + SD+T +Q + + AA+ SP + + + E V Sbjct: 454 LDDGSVLWH-GFVSDVTAHKQAEESLITLSAAVEQSPVSIVISDPRGLIEYVNPMFEQVS 512 Query: 287 NESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGI---LQI 336 + L + A + W R++DG+ + Sbjct: 513 GYRRAEVMGQNPRILSSHEKSEDEYREMWATLLAGDIWHGEFHSRRKDGSLFWEQAAIAP 572 Query: 337 KTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDD 396 ++ DI++ ++ + IE L +D +TGLPNR L++ L Sbjct: 573 IFDDHGRPIHYLAIKEDITK--------RKAAEAEIEHLAFYDLLTGLPNRRLLNDRLQQ 624 Query: 397 LVD---KAVSP-VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEG 452 ++ ++ + I +D+ +++ D+ G+ D L +V R ++ + R+ G Sbjct: 625 VLAVGTRSRRHGALLFIDLDNFKNLNDTQGHEQGDVLLQQVAQRLNFCVRECDTVARLGG 684 Query: 453 TQFVLVSLENDVSN------ITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLG--KN 504 FV++ + + ++ + + +P + S+G++ Sbjct: 685 DDFVVMLQDLSEQQTEAATQAEGVGQKILDALHQPYPFGHFTHHGSASVGVALFNASQDT 744 Query: 505 RDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQ 564 + LL A A+ + G N +FF P M ++ R + A ++ + NQ L YQPQ Sbjct: 745 VEELLKRADLALYQAKDAGRNTLRFFDPDMQAVISARAEMEADMRLGLQENQFLLYYQPQ 804 Query: 565 IFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWR- 623 + G L G+EAL RW PL G V P+ FIPLAE+ G I +G+WV+ ACRQL WR Sbjct: 805 VN-HAGRLIGVEALVRWQHPLRGLVAPAHFIPLAEDTGLILPLGQWVMEAACRQLQLWRT 863 Query: 624 SQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKR 683 + ++VN+SAL F + V + G +L +E+TES++++ + + Sbjct: 864 QAHTAQLTIAVNVSALQFHGESFVSDVLATLARTGAPADRLKLELTESLLVKDVDGVIAK 923 Query: 684 IQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSI 743 + L+ GVG S+DDFGTG+S LS L LP+ +IKID+SFV L+ + AL+ A ++ Sbjct: 924 MVALKAHGVGFSLDDFGTGYSSLSYLKRLPLDQIKIDQSFVSDALSNPKDAALVRATVAM 983 Query: 744 GQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 G+ L + V+AEGVET+ Q + L C QGYFF RP+P E+ ++ Sbjct: 984 GRGLGMMVIAEGVETQMQRDFLEGEGCLNFQGYFFGRPVPVAELACFL 1031 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 50/309 (16%), Positives = 101/309 (32%), Gaps = 22/309 (7%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLI----NENDEVMFFNPAAEKLWGYKREEVIG--N 55 + + A A + + F + K++ E V Sbjct: 342 RHSTAQRQALVQLQSLTHHVPGVVFQYLLRPDGSSCFPFASAGLHKIFRLSPEAVAQDAA 401 Query: 56 NIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS-AEG 114 + L+ D + + + + E +++ DG+ W + +G Sbjct: 402 PLFALMHPDDAAG----VAASIQASSRALTPWVDEYRVKFGDGTVRWLSSKAAPQKLDDG 457 Query: 115 KVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS 174 V + V D + +E L AV+ +++ DP I N F ++ GY + Sbjct: 458 SVLWHGFVSDVTAHKQAEESLITLSAAVEQSPVSIVISDPRGLIEYVNPMFEQVSGYRRA 517 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 E G P +L+ E D + L EF + G W +A+I+P++D Sbjct: 518 EVMGQNP-RILSSHEKSEDEYREMWATLLAGDIWHGEFHSRRKDGSLFWEQAAIAPIFDD 576 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLF 294 + + DIT+ + + F+++ + +LN+ + Sbjct: 577 HGRPIHYLAIKEDITKRKAAEAEIEH--------LAFYDL--LTGLPNRRLLNDRLQQVL 626 Query: 295 ALRNGMPIH 303 A+ H Sbjct: 627 AVGTRSRRH 635 >UniRef50_A4BQ25 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQ25_9GAMM Length = 818 Score = 803 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 200/797 (25%), Positives = 349/797 (43%), Gaps = 52/797 (6%) Query: 39 PAAEKLWGYKR-----------EEVIGNNIDMLIPRDLRPAH--PEYIRHNREGGKA--- 82 A + GY EE + + D++I P+ P+ +R + G Sbjct: 21 ARALRAGGYDPILHRIENASRMEEALQHPWDVIISDYTMPSFSTPQALRLLQRKGVDIPF 80 Query: 83 -RVEGMSRELQLEK--KDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLI 139 V G E + + K G+ + L + + ++Q ++L Sbjct: 81 IMVSGTVGEDRAVQVMKAGAHDYIMKEQLSRLVPAVRRELREAKLRRERVRAQKQLQKLS 140 Query: 140 IAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQ 199 A++ V + +P+ I N AF + G+ EA +L + A + Sbjct: 141 RAIEQTAECVFITNPDGIIEYVNPAFERLTGFTSEEAM-RNSPRILRSGQHSASFYRDMW 199 Query: 200 QLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEG 259 + L + + + G + + I+P+ D + + V T +I++ + + Sbjct: 200 RTLKDGGVFRGMVINRRKNGALFYEEKVITPIKDSNGVITHFVSTGQNISDRMEAETIRK 259 Query: 260 NILAAMCSSPPFHEMGEIIC---------RNIESVLNESHVSLFALRNGMPIHWASSSHG 310 + A + ++ F + ++ R++ + E V + L +G ++ Sbjct: 260 RLTATLEATTDFVAIADLQGHLLYANAARRSVLGLAPEDKVGICTLSDGHTEWASAKLMS 319 Query: 311 AEIQ---NAQSWSATI--RQRDGAPAGILQIKTSS---GAETSAFIERVADISQHMAALA 362 I +WS + RDG + ++ + E F +IS Sbjct: 320 KAIPTAMQEDTWSGELALIDRDGLEIPVSEVIIAHRGPDGEVQFFSAIARNIS------- 372 Query: 363 LEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVI 418 E+++ + + D +T LPNR+ L + + + A V + +D + + Sbjct: 373 -ERKRLEEELAYRASHDALTCLPNRSLLLDRMQQALAYARRYNHRVGVLFVDLDRFKRIN 431 Query: 419 DSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN-DVSNITQIADELRNV 477 D+LG+ D L V R + ++ + R G +FV+++ + D +++ I ++R Sbjct: 432 DTLGHHAGDTILRTVAERICQGVRRSDTVSRHGGDEFVVIAAQVFDSNDLASIVSKIRKT 491 Query: 478 VSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMN 535 VS+PI + ++ LT SIGI+ G++ D LL A AM ++NG N +Q+++ MN Sbjct: 492 VSEPIKVKNRQVVLTCSIGIALYPFDGEDTDTLLKNADTAMYQAKENGRNDFQYYTKEMN 551 Query: 536 EMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFI 595 E L L L+ A+ + L YQPQ+ +TG L +EAL RW P G + P FI Sbjct: 552 AQSHEMLNLEEELRRAVKAGEFVLHYQPQVDLQTGALSRLEALIRWQHPERGMLAPGTFI 611 Query: 596 PLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMH 655 P+ EE G IE +G WV+ EA RQ A W+ + ++VNLS F + + + + Sbjct: 612 PVLEETGLIEPVGEWVVREAVRQCAVWKEMELPPVTVAVNLSVRQFANLNIAEAIERIVT 671 Query: 656 AWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVT 715 GI L +EITES++M + + ++ L G+ ++VDDFGTG+ L L LPV Sbjct: 672 EAGIPPACLELEITESVLMADAFDGAEALRALSQRGLRVAVDDFGTGYCALHYLRRLPVN 731 Query: 716 EIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQG 775 +K+D SFV + A++ AI ++G L VVAEGVET Q L ++ C + QG Sbjct: 732 TLKVDHSFVSDLEGDPTTAAIVSAIITLGHDLGCKVVAEGVETLAQCNHLHRLGCDLAQG 791 Query: 776 YFFSRPLPAEEIPGWMS 792 Y + RP P EEI + Sbjct: 792 YLYYRPCPPEEIEPLLQ 808 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 39/264 (14%), Positives = 95/264 (35%), Gaps = 8/264 (3%) Query: 5 DADNAADGI--FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 + A + A+EQ + N + + + NPA E+L G+ EE + N+ +L Sbjct: 128 ERVRAQKQLQKLSRAIEQTAECVFITNPDGIIEYVNPAFERLTGFTSEEAMRNSPRILRS 187 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLA 120 + + + G + +K+G+ + ++ + V ++++ Sbjct: 188 GQHSASFYRDMWRTLKDG----GVFRGMVINRRKNGALFYEEKVITPIKDSNGVITHFVS 243 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 ++ S M + ++L ++ V + D + H++ N A + G + G+ Sbjct: 244 TGQNISDRMEAETIRKRLTATLEATTDFVAIADLQGHLLYANAARRSVLGLAPEDKVGIC 303 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 + + A + + E L+ R G +I + I +Q Sbjct: 304 TLSDGHTEWASAKLMSKAIPTAMQEDTWSGELALIDRDGLEIPVSEVIIAHRGPDGEVQF 363 Query: 241 LVMTFSDITEERQIRQLEGNILAA 264 +I+E +++ + + Sbjct: 364 FSAIARNISERKRLEEELAYRASH 387 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 803 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 181/618 (29%), Positives = 297/618 (48%), Gaps = 38/618 (6%) Query: 197 RLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQ 256 + Q K A E+ L R GE S + ++D +V +I + ++ Q Sbjct: 330 LISQAADKVAGGDLEYELPARLGEGEVAHLS-TAIHD------MVVNLTHEIKQRKEAEQ 382 Query: 257 LEGNILAAMC---SSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSH---- 309 + + + I ++ + + P +S H Sbjct: 383 GLRLSAKVFESNTEAIMITDAEQNIVMVNQAFTQITGYGADEVLGQRPKLLSSGRHGPEF 442 Query: 310 ----GAEIQNAQSWSATI--RQRDGAPAGILQIK---TSSGAETSAFIERVADISQHMAA 360 ++ W I ++++G ++ S ++ DI+ Sbjct: 443 YEAFWHALRANDLWRGEIWNKRKNGEIFPEWVTISALRDETSQISHYVAVFLDIT----- 497 Query: 361 LALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQD 416 E++K + I L +D +TGLPNR L + ++ A V I +D+ ++ Sbjct: 498 ---ERKKEEERINYLANYDVLTGLPNRYLLSDRIEQAFSSAQRNNFKVAVLFIDLDYFKN 554 Query: 417 VIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDV-SNITQIADELR 475 + DSLG+ D L V R + L+ + R+ G +FV + E D + +A+++ Sbjct: 555 INDSLGHDIGDALLKLVAARLKTCLRRSDTIARLGGDEFVALLSELDSSEEVIFVAEKMI 614 Query: 476 NVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPA 533 +++ + + +T SIGI D G+ LL A AM + +G N ++F+SP Sbjct: 615 ESLTEKFTLGEYQLSITPSIGICIYPDDGETSVELLRNADLAMYQAKDDGRNNFKFYSPD 674 Query: 534 MNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSR 593 MN ERL L L+ AI QL + YQP++ +G++ G+EAL RW P G + P+ Sbjct: 675 MNRKALERLKLETFLRVAIVQQQLSVYYQPKVSVLSGKMTGMEALLRWQHPELGFISPAV 734 Query: 594 FIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDA 653 FIP+AEE G I IG WV+ ++C Q W++Q I ++VNLSA + + +V Sbjct: 735 FIPIAEETGLINEIGDWVLRQSCLQARLWQAQGYDIVPIAVNLSARQLKQDNFAARVVTI 794 Query: 654 MHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLP 713 + G+D H L +EITESM+M + ++ LRD GV L++DDFGTG+S LSRL +LP Sbjct: 795 LREAGLDAHYLVLEITESMLMSTGESGLQILEQLRDDGVRLALDDFGTGYSSLSRLKNLP 854 Query: 714 VTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVI 773 + +KID+SFV +T+ +++ A + +LNL V AEGVET+EQ + +R ++C Sbjct: 855 LDSLKIDQSFVRDIVTDPNDASIVSATAVLAHALNLKVTAEGVETQEQLDFIRMLNCEEY 914 Query: 774 QGYFFSRPLPAEEIPGWM 791 QGY FSRP+PA E+ + Sbjct: 915 QGYLFSRPIPASEVVKYF 932 Score = 130 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 75/210 (35%), Gaps = 8/210 (3%) Query: 52 VIGNNIDMLIPRDLRPAHPEYIR--HNREGGKARVEGMSRELQLEKKDGSKIWTRFALSK 109 ++G + +L R +V G E +L + G ++ Sbjct: 304 LVGAALGLLFAWLGWLMAGRIARPISLISQAADKVAGGDLEYELPARLG-----EGEVAH 358 Query: 110 VSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMF 169 +S + L + ++ R + +++ D E++IV N+AFT++ Sbjct: 359 LSTAIHDMVVNLTHEIKQRKEAEQGLRLSAKVFESNTEAIMITDAEQNIVMVNQAFTQIT 418 Query: 170 GYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASIS 229 GY E G +P LL+ + L + E + GE +IS Sbjct: 419 GYGADEVLGQRP-KLLSSGRHGPEFYEAFWHALRANDLWRGEIWNKRKNGEIFPEWVTIS 477 Query: 230 PVYDVLAHLQNLVMTFSDITEERQIRQLEG 259 + D + + + V F DITE ++ + Sbjct: 478 ALRDETSQISHYVAVFLDITERKKEEERIN 507 Score = 113 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 53/155 (34%), Gaps = 11/155 (7%) Query: 7 DNAADGIFFP---ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 A+ E N ++ + ++ N A ++ GY +EV+G +L Sbjct: 377 RKEAEQGLRLSAKVFESNTEAIMITDAEQNIVMVNQAFTQITGYGADEVLGQRPKLLSSG 436 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYLAL 121 P E H + E+ ++K+G W + + +Y+A+ Sbjct: 437 RHGPEFYEAFWHALRA----NDLWRGEIWNKRKNGEIFPEWVTISALRDETSQISHYVAV 492 Query: 122 VRDASVEMAQKEQTRQL--IIAVDHLDRPVIVLDP 154 D + ++E+ L + L ++ D Sbjct: 493 FLDITERKKEEERINYLANYDVLTGLPNRYLLSDR 527 >UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KF61_9GAMM Length = 810 Score = 803 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 187/768 (24%), Positives = 345/768 (44%), Gaps = 45/768 (5%) Query: 47 YKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFA 106 + ++G ++ + + + + + + + G + W R Sbjct: 57 LSLDTILGQVVN-----EDVAGFEAAMARLI--TEPEGKAQEVDFRADLDSGEQRWFRAI 109 Query: 107 LSKVSAEGKV--YYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRA 164 + + + ++ D + + + ++ + ++ E I N A Sbjct: 110 GRSYANSEQTVTHAAGVLLDVTAQQSAQQ---YYDTFFQQPNGMHLLASIEGDIKLANSA 166 Query: 165 FTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWI 224 + GY E G L++ + A +Q L E + G I Sbjct: 167 WELALGYTPEELIGKNFLELVHEEDR-AVTVKEMQNLSKGLKTLYFENRYRHKNGSYRVI 225 Query: 225 KASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------I 278 S + + DI++E +Q A +S + + + Sbjct: 226 AWSAA----AADQDSIICAVGRDISKENAAKQGLFQAAAVFKNSGEGILISDEKGLIRDV 281 Query: 279 CRNIESVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPA 331 + S LR+G ++ +W I R++ GA Sbjct: 282 NAAFSQITGYSRDEAIGQATSLLRSGRHDAEFYKKMWHALKETGTWRGEIWNRRKSGAVF 341 Query: 332 GILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLH 391 L + + S F+ DI+Q +++ + +++L +DP+T LPNR ++ Sbjct: 342 PELLTISKIDGQNSGFVAIFTDITQ--------LKETEEQLQKLAHYDPLTELPNRYLIN 393 Query: 392 NYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYL 447 L + +A V+ + +D +++ DSLG+ D+ L NR RE L+ D + Sbjct: 394 ERLQQSIRRAQRRSERLAVFFLDIDSFKNINDSLGHLAGDKLLAMTANRLRELLRDDDTV 453 Query: 448 CRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKN 504 RI G +F+++ + N T IA+++ + KP +++ + ++ S+GIS D G+ Sbjct: 454 GRIGGDEFLMLLEDINSPDVATNIAEKIIGALRKPTILEGRSVSVSASVGISIYPDDGQT 513 Query: 505 RDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQ 564 + L+S A AM ++ G N ++F+S + + +++ +AL+EA S N+ +L +QPQ Sbjct: 514 AETLMSNADAAMYSAKEQGRNTFRFYSENLTRAAFQNVLIDSALREAKSRNEFRLAFQPQ 573 Query: 565 IFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRS 624 I T L G+E L RWH P G V P++FIP AE G I +IG+WV+ +AC Q +W + Sbjct: 574 IDIVTNSLLGLEVLLRWHHPTLGTVSPAQFIPQAERTGLIRDIGQWVLEQACLQGNKWLA 633 Query: 625 QNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRI 684 + + L+VN+SA FR+ +QV + ++L +E+TES++++ ++ + Sbjct: 634 EGLPFGRLAVNVSAPQFRAEDFVDQVRQVLEYANFPPNRLELELTESVLVQDTEQLIGNM 693 Query: 685 QILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIG 744 LR MG+ ++DDFGTG+S LS L +P+ +K+DKSFVD T+ + EA+ ++G Sbjct: 694 DELRAMGIQFAIDDFGTGYSSLSYLKKMPIDRLKLDKSFVDNISTDDNDRIIAEAVVALG 753 Query: 745 QSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 Q++ L V+AEG+E +EQ LR I C QG+ + P+ I G + Sbjct: 754 QAMGLEVIAEGIEYEEQARALRDIGCTQFQGFLYGMPMYTSRIEGVLR 801 Score = 172 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 101/257 (39%), Gaps = 11/257 (4%) Query: 8 NAADGIFFPALEQNMMGAVLI-NENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 + ++ Q G L+ + ++ N A E GY EE+IG N L+ + R Sbjct: 133 QQSAQQYYDTFFQQPNGMHLLASIEGDIKLANSAWELALGYTPEELIGKNFLELVHEEDR 192 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDAS 126 + +++ +G ++ + E + K+GS ++ + + + + RD S Sbjct: 193 AVTVKEMQNLSKG----LKTLYFENRYRHKNGSYRVIAWSAAAADQDSIICAVG--RDIS 246 Query: 127 VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 E A K+ Q + +++ D + I N AF+++ GY EA G LL Sbjct: 247 KENAAKQGLFQAAAVFKNSGEGILISDEKGLIRDVNAAFSQITGYSRDEAIGQATS-LLR 305 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 A+ ++ L +T + E ++G +IS + V F+ Sbjct: 306 SGRHDAEFYKKMWHALKETGTWRGEIWNRRKSGAVFPELLTISKI---DGQNSGFVAIFT 362 Query: 247 DITEERQIRQLEGNILA 263 DIT+ ++ + + Sbjct: 363 DITQLKETEEQLQKLAH 379 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 802 bits (2072), Expect = 0.0, Method: Composition-based stats. Identities = 172/594 (28%), Positives = 270/594 (45%), Gaps = 36/594 (6%) Query: 227 SISPVYDVLAHLQNLVM--TFSDITEERQIRQLEGNILAAMCSSPPFHEMG--------- 275 I + D V +DI + A+ +S + Sbjct: 357 RIQLLVDDRTAQLRTVNDDLIADIAARKHAEHELQLRERAIEASANAIIIARAVAPDYPL 416 Query: 276 EIICRNIESVLNESHVSLFALR-------NGMPIHWASSSHGAEIQNAQSWSATIRQRDG 328 E + + S + A + ++DG Sbjct: 417 EYVNPAFTRITGYSPEEALGRNIGFLWGKDWEQPGIEELRSIALEKREGHAVLRNYRKDG 476 Query: 329 APAGI---LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLP 385 A + E S F+ + DI+ ++ +E D +TGL Sbjct: 477 ALFWSDLYIAPVKDDTGEVSHFVVALYDITAT--------KRYESELEFQTNRDALTGLA 528 Query: 386 NRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKL 441 NR+ L + L + A + + +D + V D+LG+ D L + R + + Sbjct: 529 NRSLLRDRLSQAISYAHRYNHPIWIAFVDLDRFKFVNDTLGHQAGDLLLKAIAERLQHAV 588 Query: 442 KPDQYLCRIEGTQFVLVSLEN-DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD 500 + + R+ G +FVL+ E D T I + + +++P+ I+ F ++ SIG++ Sbjct: 589 RDTDTVSRMGGDEFVLILPERVDAGLSTGIVQRIMDGIAQPLTIEGHEFFISSSIGVAVY 648 Query: 501 --LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLK 558 G + L+ A AM ++ G N +QF++ +MNE ERL L L+ A+ + Sbjct: 649 PNDGVTPEELIKHADIAMYRAKETGRNNFQFYTSSMNERALERLRLEGDLRNAMERGEFI 708 Query: 559 LVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQ 618 L YQPQ+ TG++ G+EAL RW P G +PP RFI LAEE G I IG WVI EACRQ Sbjct: 709 LHYQPQLDLRTGKIVGVEALIRWQHPELGMIPPMRFIGLAEETGLIVPIGAWVIREACRQ 768 Query: 619 LAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDT 678 W+ + +SVNLSA F L ++ A+ + L +E+TES++M Sbjct: 769 NKVWQEHGLGSLRMSVNLSARQFAQQDLLESIALALEETQLPPQCLEIELTESLVMADVD 828 Query: 679 EIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLE 738 ++ L+ +GV LS+DDFGTG+S LS L P+ +KID+SFV+ T+ A++ Sbjct: 829 HAIGILRELKALGVQLSIDDFGTGYSSLSYLKRFPIDVLKIDRSFVNDITTDPDDAAIVA 888 Query: 739 AITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 +I S+ SL LTV+AEGVET+EQ L++ C IQGYFFSRP+ A+ + + Sbjct: 889 SIISLAHSLRLTVIAEGVETEEQLAYLQQHDCDQIQGYFFSRPITADAMEVMLK 942 Score = 99.7 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 41/284 (14%), Positives = 95/284 (33%), Gaps = 19/284 (6%) Query: 99 SKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIV---LDPE 155 + + +A+ + L+ D + + + + A++ +I+ + P+ Sbjct: 354 RSRRIQLLVDDRTAQLRTVNDDLIADIAARKHAEHELQLRERAIEASANAIIIARAVAPD 413 Query: 156 RHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLL 215 + N AFT + GY EA G L ++ L+ + + Sbjct: 414 YPLEYVNPAFTRITGYSPEEALGRNIGFLW-GKDWEQPGIEELRSIALEKREGHAVLRNY 472 Query: 216 TRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLE--GNILAAMCSSPPFHE 273 + G W I+PV D + + V+ DIT ++ A+ Sbjct: 473 RKDGALFWSDLYIAPVKDDTGEVSHFVVALYDITATKRYESELEFQTNRDALTGLANRSL 532 Query: 274 MGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQN------AQSWSATIRQRD 327 + + + + I +H A + + + + G + + A+ +R D Sbjct: 533 LRDRLSQAISYAHRYNHPIWIAFVDLDRFKFVNDTLGHQAGDLLLKAIAERLQHAVRDTD 592 Query: 328 ------GAPAGILQIKTSSGAETSAFIERVAD-ISQHMAALALE 364 G ++ + ++ ++R+ D I+Q + E Sbjct: 593 TVSRMGGDEFVLILPERVDAGLSTGIVQRIMDGIAQPLTIEGHE 636 Score = 88.5 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 68/220 (30%), Gaps = 39/220 (17%) Query: 9 AADGIFF-PALEQNMMGAVL---INENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 + A+E + ++ + + + + NPA ++ GY EE +G NI L +D Sbjct: 387 EHELQLRERAIEASANAIIIARAVAPDYPLEYVNPAFTRITGYSPEEALGRNIGFLWGKD 446 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLALV 122 E +R L+ +KDG+ W+ ++ V + +++ + Sbjct: 447 WEQPGIEELR----SIALEKREGHAVLRNYRKDGALFWSDLYIAPVKDDTGEVSHFVVAL 502 Query: 123 RDASVEMAQKEQTR-------------------QLIIAVDHL-----DRPVIVLDPERHI 158 D + + + +L A+ + + +D + Sbjct: 503 YDITATKRYESELEFQTNRDALTGLANRSLLRDRLSQAISYAHRYNHPIWIAFVDLD-RF 561 Query: 159 VQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRL 198 N G+ + L D R+ Sbjct: 562 KFVNDT----LGHQAGDLLLKAIAERLQHAVRDTDTVSRM 597 >UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IR9_DECAR Length = 952 Score = 801 bits (2071), Expect = 0.0, Method: Composition-based stats. Identities = 186/692 (26%), Positives = 307/692 (44%), Gaps = 38/692 (5%) Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 K + +L + + PV V + + CN+AF + G G + Sbjct: 269 REMKLERSRLQALLSAIPDPVFVKNANGVFMSCNKAFERLLGAPEKSILGKTDYDFFDKD 328 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 +E+L G + + +P+Y + DI Sbjct: 329 LADFFREKDRAATAAGRPLSNEEWLEFAADGYSGLFETTKTPLYL-DGQAIGTLGIAHDI 387 Query: 249 TEERQIRQLEGNILAAMCS--SPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWAS 306 T ++I AA S + + +I R ++ L ++ ++ P S Sbjct: 388 TRRKRIEADLRLAAAAFESQTAMLVTDANGVILRVNQAFLRDTGYAVEECVGQTPRILRS 447 Query: 307 SSH--------GAEIQNAQSWSATI--RQRDGAPAG---ILQIKTSSGAETSAFIERVAD 353 H I+++ W I R++DG+ + E + +I D Sbjct: 448 GRHDPAFYQKMWESIRSSGVWQGEIWDRRKDGSIYPKWLTISAVLGDSGEVTHYIGLHQD 507 Query: 354 ISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPV----VYLI 409 +S E++ + I QL +D +TGLPNR L L ++ K + + + Sbjct: 508 VS--------ERKLAESRIHQLAYYDQVTGLPNRILLQERLSQVMAKCRASSNYGVLLFV 559 Query: 410 GVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVS---- 465 +D+ + + D+LG+ D L +V R + + R+ G +F ++ E Sbjct: 560 DLDNFKTLNDTLGHNVGDLLLKQVGEVLRRCSRESDTVARLGGDEFAVIMSELGTDPSAA 619 Query: 466 --NITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGK--NRDYLLSTAHNAMDYIRK 521 A L + + + + + T+SIG + G+ + + L+ A+ + Sbjct: 620 MQGAEAAARYLLSELGRTFQLGNVIHRNTVSIGATLFKGEQESIESLMRQIDLAIYQAKG 679 Query: 522 NGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARW 581 G N +FF P+M ++ER + AL+ AI Q L YQ QI E G + G E L RW Sbjct: 680 AGRNTVRFFDPSMEIALRERAAIEEALRYAIEEEQFLLHYQAQI-GEDGRIEGAEVLLRW 738 Query: 582 HDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN-IHIPALSVNLSALH 640 P G V P+ FIPLAEE G+I +G WV+ +A QLA W + L+VN+SA+ Sbjct: 739 QHPERGMVSPAIFIPLAEETGDIVLLGSWVLKQAAAQLARWAESPVMAGLVLAVNVSAVQ 798 Query: 641 FRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFG 700 R QV+ + G D +L +E+TESM++ ++Q L+ +G+G S+DDFG Sbjct: 799 LRQPDFVEQVTTVLREAGADPGRLKLELTESMLVNDVEATIAKMQSLKAIGIGFSLDDFG 858 Query: 701 TGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKE 760 TG+S LS L LP++++KID+SFV L + +A+ ++ ++ +SL L V+AEGVET+ Sbjct: 859 TGYSSLSYLKRLPLSQLKIDQSFVRDVLVDANDVAIASSVVALAKSLGLGVIAEGVETEA 918 Query: 761 QFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 Q E+L I C QGY FSRPLP + +S Sbjct: 919 QRELLAGIGCHCYQGYLFSRPLPIGDFERLVS 950 Score = 184 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 49/326 (15%), Positives = 98/326 (30%), Gaps = 13/326 (3%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 L + N N M N A E+L G + ++G +DL Sbjct: 271 MKLERSRLQALLSAIPDPVFVKNANGVFMSCNKAFERLLGAPEKSILGKTDYDFFDKDLA 330 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK-VYYLALVRDA 125 E R G+ E DG + + +G+ + L + D Sbjct: 331 DFFREKDRAATAAGRPLSNEEWLEF---AADGYSGLFETTKTPLYLDGQAIGTLGIAHDI 387 Query: 126 SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 + + R A + ++V D I++ N+AF GY + E G P +L Sbjct: 388 TRRKRIEADLRLAAAAFE-SQTAMLVTDANGVILRVNQAFLRDTGYAVEECVGQTP-RIL 445 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 ++ + + + Q E + G +IS V + + + Sbjct: 446 RSGRHDPAFYQKMWESIRSSGVWQGEIWDRRKDGSIYPKWLTISAVLGDSGEVTHYIGLH 505 Query: 246 SDITEERQIRQLEGN-----ILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGM 300 D++E + + + + E + + N + L N Sbjct: 506 QDVSERKLAESRIHQLAYYDQVTGLPNRILLQERLSQVMAKCRASSNYGVLLFVDLDNFK 565 Query: 301 PIHWASSSHGAEIQNAQSWSATIRQR 326 ++ + ++ Q + +R Sbjct: 566 TLNDTLGHNVGDLLLKQV--GEVLRR 589 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 55/155 (35%), Gaps = 9/155 (5%) Query: 2 KLTDADN-AADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 +T AD A ++ ++ + N ++ N A + GY EE +G +L Sbjct: 386 DITRRKRIEADLRLAAAAFESQTAMLVTDANGVILRVNQAFLRDTGYAVEECVGQTPRIL 445 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYY 118 PA + + + E+ +KDGS W + + +Y Sbjct: 446 RSGRHDPAFYQKMWESIRSS----GVWQGEIWDRRKDGSIYPKWLTISAVLGDSGEVTHY 501 Query: 119 LALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIV 151 + L +D S + + QL V L +++ Sbjct: 502 IGLHQDVSERKLAESRIHQLAYYDQVTGLPNRILL 536 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 801 bits (2071), Expect = 0.0, Method: Composition-based stats. Identities = 181/690 (26%), Positives = 307/690 (44%), Gaps = 41/690 (5%) Query: 134 QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPAD 193 + + A+D + + D + I++ N F + Y SE G +LN P Sbjct: 31 ELADVKYALDQSTI-LAITDHKGIILRANEQFCRISKYERSELIG-NDHRILNSGYHPKS 88 Query: 194 NRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQ 253 + + + E + G W+ +I P + + + SDIT +Q Sbjct: 89 FFKEMWSCIRSGQVWRGEIRNCAKDGSYYWVDTTIVPFKNQAGEIYQYLSIRSDITARKQ 148 Query: 254 IRQLEGNILA----AMCSSPPFHEMGEIIC------RNIESVLNESHVS-----LFALRN 298 + ++ + + + + V + LF Sbjct: 149 MEDELKRSEEKYRIIAENTSDIISIINLDGEFLYLSPSHKRVWEHTVPDEEIHNLFEWIV 208 Query: 299 GMPIHWASSSHGAEIQNAQSWSATIR---QRDGAPAGILQIKT---SSGAETSAFIERVA 352 + + + + R QR+ + + Sbjct: 209 EDDRDIFAYAIQHAFSTRKEYMVECRINTQRN-DVIWTESKINPIMDEEGNVTKLLLITR 267 Query: 353 DISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYL 408 D++ ++++S + I L D +T LPNR L + +A V Sbjct: 268 DVT--------DRKQSEETIHHLAYHDALTDLPNRRMYVQQLSKEMMQAKRFQSSLAVLF 319 Query: 409 IGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN-DVSNI 467 + +D +DV DS G+ D L+E R + LKP + R+ G +F ++ + D + Sbjct: 320 LDLDRFKDVNDSFGHDVGDMLLIEASKRLQACLKPGDVVARLGGDEFTIMQNQLLDRNEA 379 Query: 468 TQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGN 525 T++A+++ + +P +D F ++ SIGI+ G N + LL A A+ ++ G N Sbjct: 380 TELAEQIMYQLQRPFELDGHVFNVSCSIGIALYPQDGDNPEDLLKRADTALYTVKSRGKN 439 Query: 526 GWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPL 585 G+ FF P+M ER+++ +++AI Q ++ YQP+I T + G+EAL RW P Sbjct: 440 GYDFFDPSMEAKSLERILMENEMRKAIEQEQFQIYYQPKIDIATSAMTGMEALVRWVHPE 499 Query: 586 HGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQ 645 G +PP+RFIP+AEE G I +G W++ +AC+Q W Q +SVNLSA Sbjct: 500 LGIIPPNRFIPIAEETGMILALGEWILKQACKQNKNWHDQGYT-LKVSVNLSARQIYQKD 558 Query: 646 LPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSG 705 L + D + + H L +EITES+ ++ E +Q +RD+G+ +S+DDFGTG+S Sbjct: 559 LVEMIKDILQETKLSPHWLELEITESIFVK-MEEATAVLQQIRDIGIQISIDDFGTGYSS 617 Query: 706 LSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEML 765 S + SLPV IKID SF+ + A+++AI +I QSLN+ V+AEG+E +Q L Sbjct: 618 FSYIKSLPVDTIKIDASFIRDIHHNQESQAIVKAIVTIAQSLNMNVIAEGIELHDQVAAL 677 Query: 766 RKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 ++ C QGY FS+PLP ++ + L Sbjct: 678 KENGCDHGQGYLFSKPLPTDDFDQLLRQEL 707 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 35/250 (14%), Positives = 96/250 (38%), Gaps = 12/250 (4%) Query: 17 ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHN 76 AL+Q+ + + + ++ N ++ Y+R E+IGN+ +L HP+ Sbjct: 38 ALDQSTI-LAITDHKGIILRANEQFCRISKYERSELIGNDHRILNSG----YHPKSFFKE 92 Query: 77 REGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLALVRDASVEMAQKEQ 134 + E++ KDGS W + + YL++ D + +++ Sbjct: 93 MWSCIRSGQVWRGEIRNCAKDGSYYWVDTTIVPFKNQAGEIYQYLSIRSDITARKQMEDE 152 Query: 135 TRQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEF 190 ++ I ++ + +++ + + + + ++ + + + + + Sbjct: 153 LKRSEEKYRIIAENTSDIISIINLDGEFLYLSPSHKRVWEHTVPDEEIHNLFEWIVEDDR 212 Query: 191 PADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITE 250 +Q E + T+ + IW ++ I+P+ D ++ L++ D+T+ Sbjct: 213 DIFAYA-IQHAFSTRKEYMVECRINTQRNDVIWTESKINPIMDEEGNVTKLLLITRDVTD 271 Query: 251 ERQIRQLEGN 260 +Q + + Sbjct: 272 RKQSEETIHH 281 Score = 76.6 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 40/270 (14%), Positives = 84/270 (31%), Gaps = 53/270 (19%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYK-REEVIGNNIDML 60 ++ D ++ + E +IN + E ++ +P+ +++W + +E I +N+ Sbjct: 148 QMEDELKRSEEKYRIIAENTSDIISIINLDGEFLYLSPSHKRVWEHTVPDEEI-HNLFEW 206 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYY 118 I D R I+H + E ++ + IWT ++ + Sbjct: 207 IVEDDRDIFAYAIQHAFST----RKEYMVECRINTQRNDVIWTESKINPIMDEEGNVTKL 262 Query: 119 LALVRDASVEMAQKEQTRQL--IIAVDHLDR----------------------PVIVLDP 154 L + RD + +E L A+ L V+ LD Sbjct: 263 LLITRDVTDRKQSEETIHHLAYHDALTDLPNRRMYVQQLSKEMMQAKRFQSSLAVLFLDL 322 Query: 155 ERHIVQCNRAFTEMFGYCISEAS----GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQD 210 + N +F G+ + + + L + A ++ D++ Sbjct: 323 D-RFKDVNDSF----GHDVGDMLLIEASKRLQACLKPGDVVARLGGDEFTIMQNQLLDRN 377 Query: 211 E---------FLLLTR---TGEKIWIKASI 228 E + L G + SI Sbjct: 378 EATELAEQIMYQLQRPFELDGHVFNVSCSI 407 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 800 bits (2068), Expect = 0.0, Method: Composition-based stats. Identities = 206/823 (25%), Positives = 357/823 (43%), Gaps = 52/823 (6%) Query: 1 MKLTDADNAADG--IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNID 58 + L+ +A + + + I+ V F +PA L +EV G ++ Sbjct: 278 IDLSRQLHAEEAQRRLEGIVAASSDAMAFIDTEGLVGFASPALCHLLSIGTQEVRGRQLE 337 Query: 59 MLIPRDLRPAHPEYIRHNREG--GKARVEGMSRELQLEKKDGSKIWTRFALSKVSA--EG 114 L+ A R +G G + + L G + Sbjct: 338 ELL------AAYANRRELMQGIEGALAGRNLRMQTWLTLPGGGVRCLESSFDPYRNTEGQ 391 Query: 115 KVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS 174 V + ++RD + +T A +LD + ++ ++ E+ Sbjct: 392 VVGAVCVLRDMTD---NARKTLLFEQAERAAQIGGWMLDIDADVLDLSQQARELLNIAAD 448 Query: 175 EASGMQPDTLLNIPEFPADN-RIRLQQLLWK-----TARDQDEFLLLTRTGEKIWIKASI 228 + ++ + RL + T + +L+T G + + S Sbjct: 449 R-QQVPLAEVMAQFDEATFKKAGRLLEAFRHSHSVATHEIHFDAVLVTPHGVRRRLALSA 507 Query: 229 SPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNI 282 + V+ + + D+T R+ + + + + Sbjct: 508 RTLQ-VVGQGHYVTGSVQDVTSLRRAERELMLSAQVFEHGSEAVFITDASHRILRVNPAF 566 Query: 283 ESVLNESHVSLFALRNGM-----PIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQ 335 E++ + + L P + S + W I R+R G Sbjct: 567 EAITGYAAGEVLGLTPDFRCVSSPGGTSISQRWELAEQTGRWQGEIVCRRRSGEHYYEWS 626 Query: 336 ---IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHN 392 + + FI + +DIS AA A + FDP+TGLPNR+ L + Sbjct: 627 ALSVVRHANGSVLYFIGQFSDISAVKAAEARALRLAC--------FDPLTGLPNRSLLFD 678 Query: 393 YLDDLVDKA-VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIE 451 L +++++ + V +D +++ DSLG+ D L EV R +++P +CR Sbjct: 679 RLQEVLNREPHNGAVLFCDLDRFKNINDSLGHTLGDAVLKEVARRLVARVRPGDTVCRYG 738 Query: 452 GTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYL 508 G +FVLV +D + Q+A++L VS PI++D +T S+G++ G + D L Sbjct: 739 GDEFVLVLPGLSDCVVLEQLAEQLLADVSSPILLDGLDLRVTPSLGVAVFPRDGNDCDAL 798 Query: 509 LSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAE 568 L A A+ + + G N ++FF+ +++ V E L + L+ A+ + +L YQPQ+ Sbjct: 799 LRHADAALYHAKSRGRNTYRFFTREIDDRVSEYLHIEHGLRSALERGEFELHYQPQVDMA 858 Query: 569 TGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIH 628 G + G+EAL RW P G + P RF+P+AEE G I IG WVI EACRQ WR + Sbjct: 859 FGRVVGVEALLRWKHPEQGMISPVRFVPIAEETGLIVPIGMWVIREACRQAMLWRRAGLR 918 Query: 629 IPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILR 688 ++VNLS F + + + +A+ G+D L VE+TES++ME E + ++ LR Sbjct: 919 PMTMAVNLSGRQFSRS-VIEAIDEALADSGLDPRWLQVEVTESVIMEDTQEAYTVLEALR 977 Query: 689 DMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLN 748 G+ ++VDDFGTG+S L+ L P+ ++KID+SF+ ++ +++AI + +L Sbjct: 978 ARGLTVAVDDFGTGYSSLAYLKRFPIDKLKIDRSFIRDIDLDEDNPVIVDAIIGMAHNLR 1037 Query: 749 LTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 + V+AEGVET+ Q++ LR+ C +QGY SRP PA + WM Sbjct: 1038 IKVLAEGVETRAQWDYLRQQGCDEVQGYLVSRPQPAAALGQWM 1080 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 88/285 (30%), Gaps = 15/285 (5%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + ++ + + E + A + + PA ++ G +G D Sbjct: 156 QRQESLQRMEARWQALFETSGDVAYDFDVATRRLELAPAWMQMLG------LGRMPDDHY 209 Query: 62 PRDLRPAHPEYIRHNREGGKARVEG----MSRELQLEKKDGSKIWTRFALS---KVSAEG 114 L P+ A ++G S E L + G + + + Sbjct: 210 QDWLERVDPQVRDDVEAALCAHLQGETADYSVEYPLLHESGDWLHVFERGRVYQRDADGK 269 Query: 115 KVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS 174 + ++ D S ++ +E R+L V + +D E + + A + Sbjct: 270 PLRMHGVIIDLSRQLHAEEAQRRLEGIVAASSDAMAFIDTEGLVGFASPALCHLLSIGTQ 329 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 E G Q + LL + ++ L + + L G +++S P + Sbjct: 330 EVRGRQLEELLAAYANRRELMQGIEGALA-GRNLRMQTWLTLPGGGVRCLESSFDPYRNT 388 Query: 235 LAHLQNLVMTFSDITE-ERQIRQLEGNILAAMCSSPPFHEMGEII 278 + V D+T+ R+ E AA +++ Sbjct: 389 EGQVVGAVCVLRDMTDNARKTLLFEQAERAAQIGGWMLDIDADVL 433 Score = 94.3 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 44/396 (11%), Positives = 114/396 (28%), Gaps = 45/396 (11%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNID---MLIPRDLRPAHP 70 + AL G + ++ + ++ NP A ++ E+ + + + P Sbjct: 34 YRTALAHLNEGVLFVSPSGCMVPGNPEAVRIIAVPSAELSHVTREGEWETLTENGEPLAM 93 Query: 71 EYIRHNREGGKARVEGMSRELQLEKKDG--SKIWTRFALSKV---SAEGKVYYLALVRDA 125 R E + R++ ++ G W R + V + V + D Sbjct: 94 ADRPGARA--CFAGETVERQVVGMRRPGAAEVQWLRMNAAPVYQPEQQEPVGAVVTFVDI 151 Query: 126 SVEMAQKEQTRQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 + E ++E ++ + D ++ A+ +M G G P Sbjct: 152 TRERQRQESLQRMEARWQALFETSGDVAYDFDVATRRLELAPAWMQMLG------LGRMP 205 Query: 182 DTLLNI--PEFPADNRIRLQQLL-----WKTARDQDEFLLLTRTGEKIWIKASISPV-YD 233 D R ++ L +TA E+ LL +G+ + + D Sbjct: 206 DDHYQDWLERVDPQVRDDVEAALCAHLQGETADYSVEYPLLHESGDWLHVFERGRVYQRD 265 Query: 234 VLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIIC------RNIESVLN 287 + D++ + + + + + +S + + +L+ Sbjct: 266 ADGKPLRMHGVIIDLSRQLHAEEAQRRLEGIVAASSDAMAFIDTEGLVGFASPALCHLLS 325 Query: 288 ESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQ-------RDGAPAGILQI---K 337 + + + ++ + + + G + Sbjct: 326 IGTQEVRGRQLEELLAAYANRRELMQGIEGALAGRNLRMQTWLTLPGGGVRCLESSFDPY 385 Query: 338 TSSGAETSAFIERVADISQH-MAALALEQEKSRQHI 372 ++ + + + D++ + L EQ + I Sbjct: 386 RNTEGQVVGAVCVLRDMTDNARKTLLFEQAERAAQI 421 Score = 61.5 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 34/261 (13%), Positives = 77/261 (29%), Gaps = 30/261 (11%) Query: 136 RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL-----NIPEF 190 A+ HL+ V+ + P +V N + +E S + + N Sbjct: 32 EYYRTALAHLNEGVLFVSPSGCMVPGNPEAVRIIAVPSAELSHVTREGEWETLTENGEPL 91 Query: 191 PADNRIRLQQLLWKTARDQDEFLLLTRTGEKI-WIKASISPVYD-VLAHLQNLVMTFSDI 248 +R + ++ + ++ W++ + +PVY V+TF DI Sbjct: 92 AMADRPGARACFAGETVERQVVGMRRPGAAEVQWLRMNAAPVYQPEQQEPVGAVVTFVDI 151 Query: 249 TEERQIRQ----LEGNILAAMCSSPPFHEMGEIICR------NIESVLNESHVSLFALRN 298 T ERQ ++ +E A +S ++ R +L + ++ Sbjct: 152 TRERQRQESLQRMEARWQALFETSGDVAYDFDVATRRLELAPAWMQMLGLGRMPDDHYQD 211 Query: 299 GMPIHWASSSHGAEIQNAQSWSAT---------IRQRDGAPAGIL----QIKTSSGAETS 345 + E + G + + + + Sbjct: 212 WLERVDPQVRDDVEAALCAHLQGETADYSVEYPLLHESGDWLHVFERGRVYQRDADGKPL 271 Query: 346 AFIERVADISQHMAALALEQE 366 + D+S+ + A ++ Sbjct: 272 RMHGVIIDLSRQLHAEEAQRR 292 >UniRef50_B0TF94 Predicted signal transduction domain protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TF94_HELMI Length = 853 Score = 800 bits (2067), Expect = 0.0, Method: Composition-based stats. Identities = 165/704 (23%), Positives = 295/704 (41%), Gaps = 38/704 (5%) Query: 115 KVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS 174 + L++ E A K + QL L +IVLD E + N + G+ + Sbjct: 116 RQRVRRLLQAQHTEKALKARETQLSAVASALGEGLIVLDAEGRLTFMNPEAERLLGWSLP 175 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLL-----WKTARDQDEFLLLTRTGEKIWIKASIS 229 E G + ++++ D L+ DE + G + + Sbjct: 176 ELLGKKIHSIIHNRRPEGDPIAEADCLVLKTIGAGETYRSDEEYFTRKDGALFPVSLVST 235 Query: 230 PVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIE 283 P+ V + V F DI++ +++ + + ++ + + + Sbjct: 236 PLR-VNDRITGAVTAFHDISDRKKVEERLLLAAKVIETTTEGIMITDAGGVIESVNPAFC 294 Query: 284 SVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG---I 333 S L++G + W I R++ G Sbjct: 295 RSTGYSESEAIGNSPRILKSGRHDGEFYRKMWKALLETGQWQGEIWNRRKSGELYAAWLT 354 Query: 334 LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNY 393 + S T+ + +DI+ E +++++ I+ D +T LPNR + Sbjct: 355 ISAIKDSHGRTTQYAAIFSDIT--------EDKRNQERIKHQAYHDALTDLPNRLLFIDR 406 Query: 394 LDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCR 449 L + +A V + +D + + D+ G+A D L V R R ++ + R Sbjct: 407 LTQAIAQATRNCYMLAVLFLDLDRFKQINDTYGHALGDLLLQGVAGRLRRAVRDSDTVAR 466 Query: 450 IEGTQFVLVSL-ENDVSNITQIADELRNVVSKPIMIDDKP-FPLTLSIGISY--DLGKNR 505 + G +F ++ V + ++A ++ + +P + P F +T SIGI+ G+ Sbjct: 467 LGGDEFTILLPQIGSVEDAAKVAQKILASLRQPWSFEGIPSFCITTSIGIAVCPTDGEEA 526 Query: 506 DYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQI 565 + L+ A AM + G N +Q ++P +N ERL + L+ A+ + L YQP++ Sbjct: 527 ETLMHNADAAMYRAKAQGRNHYQLYTPELNAWAFERLAMETRLRRALDQGEFVLYYQPKV 586 Query: 566 FAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ 625 A TG +EAL RW P G V P+ F+ LAE+ G I IG W + EAC + W+ Sbjct: 587 EAATGNWCAVEALIRWQHPDLGLVSPTEFLRLAEDTGLIVPIGEWCLEEACVRNKAWQDA 646 Query: 626 NIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQ 685 + ++VNLSA F+ L V A+ G+ L +EI+E +++ + Sbjct: 647 GLPPVRMAVNLSARQFQHPNLLAAVEKALQKSGLPPAWLELEISEEVILRFADLAPIVLG 706 Query: 686 ILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQ 745 L+ +G+ L++D +G S ++ L LP+ +KI S V ++A+ ++ + Sbjct: 707 DLKSLGLSLTMDQYGKRDSRITLLQKLPIDRVKIAASQVIDLSACHDARKSVKALIALAR 766 Query: 746 SLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPG 789 SL+L V A+GV T+EQ + L C IQG+ FS PL AEE+ Sbjct: 767 SLDLHVAADGVGTREQCDFLTAAGCDEIQGHLFSDPLSAEEMGR 810 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 57/330 (17%), Positives = 108/330 (32%), Gaps = 10/330 (3%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 A A + G ++++ + F NP AE+L G+ E++G I +I Sbjct: 129 EKALKARETQLSAVASALGEGLIVLDAEGRLTFMNPEAERLLGWSLPELLGKKIHSIIHN 188 Query: 64 DLRPAHP-EYIRHNREGGKARVEGMS-RELQLEKKDGSKIWTRFALSKVSAEGKV-YYLA 120 P E E +KDG+ + + ++ + Sbjct: 189 RRPEGDPIAEADCLVLKTIGAGETYRSDEEYFTRKDGALFPVSLVSTPLRVNDRITGAVT 248 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 D S +E+ ++ +++ D I N AF GY SEA G Sbjct: 249 AFHDISDRKKVEERLLLAAKVIETTTEGIMITDAGGVIESVNPAFCRSTGYSESEAIGNS 308 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 P +L + ++ + L +T + Q E ++GE +IS + D Sbjct: 309 P-RILKSGRHDGEFYRKMWKALLETGQWQGEIWNRRKSGELYAAWLTISAIKDSHGRTTQ 367 Query: 241 LVMTFSDITEERQIRQLEGNI-----LAAMCSSPPFHEMGEIICRNIESVLNESHVSLFA 295 FSDITE+++ ++ + L + + F + V Sbjct: 368 YAAIFSDITEDKRNQERIKHQAYHDALTDLPNRLLFIDRLTQAIAQATRNCYMLAVLFLD 427 Query: 296 LRNGMPIHWASSSHGAEIQNAQSWSATIRQ 325 L I+ ++ + +R+ Sbjct: 428 LDRFKQINDTYGHALGDLLLQG-VAGRLRR 456 >UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7K0U5_VIBSE Length = 815 Score = 799 bits (2065), Expect = 0.0, Method: Composition-based stats. Identities = 189/769 (24%), Positives = 336/769 (43%), Gaps = 40/769 (5%) Query: 51 EVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSR--ELQLEKKDGSK----IWTR 104 EV+ D P DL +H + + G + L L D W Sbjct: 57 EVVVQVADQFTPTDLTISHISFGQQTLSIGPIWLPNGDLFAVLALTHPDDQITVVSAWLS 116 Query: 105 FALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRA 164 + ++S + +Y + A L +D L+ + + + NR+ Sbjct: 117 ALVGRMSFDVSSHYQ--QERTRHQTAATTPLPTLQEFIDCLEDHIWIKGMDGLYSMTNRS 174 Query: 165 FTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWI 224 + SE G L + + T +E + W+ Sbjct: 175 VENAWQKTNSEIIGKDDFALFSHERAEKFIEADNLVVATGTLNIVEECRQIDENNNPTWL 234 Query: 225 KASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAM---CSSPPFHEMGEIICRN 281 + SPV D +L ++ +IT + + + I Sbjct: 235 ETIKSPVRDNDGNLIGILGMTRNITRRKMVETQLSLASKIFNNSQEGMVITDRNANIIDV 294 Query: 282 IESVLNESHVSLFALRNGMPIHWASSSH--------GAEIQNAQSWSATI--RQRDGAPA 331 + + + P S H +++ W R++DG+ Sbjct: 295 NTAFTQITGYRSEEVIGKNPRILRSGHHDQGFYKQLWHQLETKGQWKGEFINRKKDGSIY 354 Query: 332 G---ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRN 388 + +I DIS ++ + ++++ +DP+T LPNR Sbjct: 355 PQLATISAVMDDKNHLINYICVFEDISV--------RKAHEEKLQRMAFYDPLTNLPNRT 406 Query: 389 NLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPD 444 +L + L+ ++ + +DH + + DS+G+ DQ L ++ R ++ L + Sbjct: 407 HLLSLLEQHIETGHKNQQTFATLFLDIDHFKHINDSMGHFCGDQLLSKLAIRLQDILHLN 466 Query: 445 QYLCRIEGTQFVLVSLENDVSNIT-QIADELRNVVSKPIMIDDKP-FPLTLSIGISYD-- 500 ++ RI G +FV++ + + ++ +V +P + + ++ SIGI+ Sbjct: 467 AHVARIGGDEFVIILPDVHSDVALLETVGDILSVFQQPFDLANHDSLRVSTSIGIALYPR 526 Query: 501 LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLV 560 G++ + LL A AM +KNG NG+ F+SP + + + + +AL +AI QL+L Sbjct: 527 DGQDSETLLKNADTAMYLAKKNGRNGYAFYSPDLTDKSVSHVRIQSALHQAIEKQQLRLE 586 Query: 561 YQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLA 620 +QPQ E + G+E L RW P G VPP+ FIP+AE+ G I++IG WV+ AC+Q Sbjct: 587 FQPQYNLEQHAIVGVETLLRWQHPEFGLVPPADFIPIAEKTGLIQSIGEWVLLHACQQGN 646 Query: 621 EWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEI 680 W Q + ++VN+SAL + + ++SD ++ G +L +EITES ++ + Sbjct: 647 AWLEQGVEFGRIAVNVSALQLQQSNFIQRLSDILNQTGFPAQRLDLEITESFLLIDPQQA 706 Query: 681 FKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAI 740 + LR++G+ +S+DDFGTG+S LS L LP+ ++KID+SFV + A++ AI Sbjct: 707 IASLNQLRELGIEISLDDFGTGYSSLSYLKGLPINKLKIDRSFVSDVPSNSDSNAIVNAI 766 Query: 741 TSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPG 789 ++G++L+L VVAEG+ET+EQ + L + C QGY FSRP+ AE++ Sbjct: 767 IAMGKTLSLKVVAEGIETQEQADYLFEKGCVYGQGYLFSRPVSAEKLFR 815 Score = 164 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 83/251 (33%), Gaps = 6/251 (2%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 ++ + + N + E W E+IG + L + E Sbjct: 148 LQEFIDCLEDHIWIKGMDGLYSMTNRSVENAWQKTNSEIIGKDDFALFSHERAEKFIEAD 207 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRDASVEMAQ 131 G + E + ++ + W S V + L + R+ + Sbjct: 208 NLVVATGTLNIVE---ECRQIDENNNPTWLETIKSPVRDNDGNLIGILGMTRNITRRKMV 264 Query: 132 KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFP 191 + Q ++ +++ D +I+ N AFT++ GY E G P +L Sbjct: 265 ETQLSLASKIFNNSQEGMVITDRNANIIDVNTAFTQITGYRSEEVIGKNP-RILRSGHHD 323 Query: 192 ADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEE 251 +L L + + EF+ + G A+IS V D HL N + F DI+ Sbjct: 324 QGFYKQLWHQLETKGQWKGEFINRKKDGSIYPQLATISAVMDDKNHLINYICVFEDISVR 383 Query: 252 RQIRQLEGNIL 262 + + + Sbjct: 384 KAHEEKLQRMA 394 >UniRef50_B1Y6A9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y6A9_LEPCP Length = 898 Score = 799 bits (2064), Expect = 0.0, Method: Composition-based stats. Identities = 201/847 (23%), Positives = 340/847 (40%), Gaps = 64/847 (7%) Query: 5 DADNAA---DGIF----FPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNI 57 +A A + ++ + ++ + N + E G+++ Sbjct: 63 NALRDAHGREQALSAFAQRVMDTVGGVVIALDPQGRLRQRNRHCQNDLAPLPE---GSSV 119 Query: 58 DMLIPRDLRPAHPEYIRHNREGGKA-------RVEGMSRELQLEKKDGSKIW--TRFALS 108 D+L+ A + H + R G E Q +DGS + A+ Sbjct: 120 DLLLHPQDLAALEAALPHLPWQVHSVLFETVRRQGGYRAEHQFAMRDGSYRYHLVEAAML 179 Query: 109 KVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLD----RPVIVLDPERHIVQCNRA 164 + + + D S Q++ R + + L P + + Sbjct: 180 YSAQNKEEGAVLSGTDISELKRQEQHLRASDARFNQAEHVARVGSWDLVPHTGAMTWSVE 239 Query: 165 FTEMFGYCI-----SEASGMQP---DTLLN--IPEFPADNRIRLQQLLWKTARDQDEFLL 214 +F +A+G L P+ A + EF + Sbjct: 240 MARIFDITAQPHASHDAAGASVYSQADFLAAVHPDERARVVAAQAAASAEHRPCDIEFRI 299 Query: 215 LTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEM 274 +T G+ W+ + + V T DITE RQ + +S + Sbjct: 300 VTSGGKMKWVHLRSTTFHGDDGRPLRSVGTVQDITERRQAEDEMRLAASVFDNSLNAILI 359 Query: 275 GEI------ICRNIESVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI 323 + + R ++ + +++G+ AE+Q W + Sbjct: 360 ADANGRIRKVNRAFTAITGYTAEEAVGDTPRLMKSGLHSPGFYGEMWAELQACGKWDGEL 419 Query: 324 --RQRDGAPAGI---LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQF 378 + +DG + + + +I DI+ EQ+ S Q I QL + Sbjct: 420 MNQCKDGRIISVRESIAAVHDPAGAVAYYIGIFHDIT--------EQKASAQRIHQLAYY 471 Query: 379 DPMTGLPNRNNLHNYLDDLVDKA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVV 434 D +TGLPNR L + + +A V + +D + + DSLG+ D L V Sbjct: 472 DVLTGLPNRALLMDRCQHELARAMRDGKRLAVLFLDLDRFKHINDSLGHPVGDGLLRAVA 531 Query: 435 NRFREKLKPDQYLCRIEGTQFVLVSLENDVS-NITQIADELRNVVSKPIMIDDKPFPLTL 493 R + L+ + R+ G +F+++ + S + A + + P +++ + Sbjct: 532 QRLQGTLRDSDTIARLGGDEFIVLLEHVETSAGVELAARRILDAFRDPFQLEEHRLSVGA 591 Query: 494 SIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEA 551 S+GIS + L A A+ + G ++FF P N+ K+R+ L L++A Sbjct: 592 SVGISLFPDHASDITSLFKYADLALYQAKAAGRGDFRFFEPRFNDAAKDRMRLERELRQA 651 Query: 552 ISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWV 611 + NQL L YQP G L G EAL RW P G V P+ FIP+AE+ G I IG WV Sbjct: 652 LERNQLSLQYQPVFALPDGRLAGAEALLRWTHPALGSVSPATFIPIAEDSGLIVPIGAWV 711 Query: 612 IAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITES 671 + +ACRQ +W + ++VNLS + + N L + VS + G+ L +EI+ES Sbjct: 712 LEQACRQARQWLDAGLDPGVIAVNLSGMQIQRNDLVDTVSSVLARTGLPACHLELEISES 771 Query: 672 MMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEK 731 + H +R+ LR +GV +++DDFGTG + L L LPV+++KID+SF+ + Sbjct: 772 YITRHAESDLQRLGQLRALGVSMAIDDFGTGQTSLGHLRRLPVSKLKIDRSFMADIEHDA 831 Query: 732 RILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 A+ AI +G L LTVVAEGVE+ Q L HC ++QG+ ++RPL A Sbjct: 832 AAAAVTRAIIGLGHGLGLTVVAEGVESAAQESALVAQHCDLVQGFRYARPLDAPVFAALC 891 Query: 792 SSVLPLK 798 + PL+ Sbjct: 892 ARPQPLR 898 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 798 bits (2063), Expect = 0.0, Method: Composition-based stats. Identities = 183/639 (28%), Positives = 293/639 (45%), Gaps = 40/639 (6%) Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV--LAHL 238 L+ P + ++ W+++ L L R G I + S V + + Sbjct: 416 MQDFLHEPAM-KHWQKHIEHFKWRSSA----ILPLHRNGNVIGVMFFYSNVLNAFTESSQ 470 Query: 239 QNLVMTFSDIT---EERQIRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNES 289 + L+ DI E + + S + + ++ + S Sbjct: 471 RLLLELVEDIDFALEHFEKEEQLQLSAQIFAQSSEGIMLLDPNCHIVMVNSAFTHITGYS 530 Query: 290 HVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQIK---TS 339 L +G ++ I+ W + R++DG+ + Sbjct: 531 EEETLGRNPKMLASGQHDRNFYATMWEAIETEGRWQGEVWNRRKDGSLYPEWLLIQTMRD 590 Query: 340 SGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD 399 S + +I D++ E++++ + ++ L FDP+TGLPNR LH + + Sbjct: 591 SRGTLTHYIGTFTDLT--------ERKETEERVQWLAHFDPLTGLPNRTLLHIRSNLAIS 642 Query: 400 KAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF 455 A + + +D+ ++V DSLG+ D+ L + R ++ + R+ G +F Sbjct: 643 LAQRRHEPLALMFLDLDNFKNVNDSLGHGVGDELLKQFSQRLVNAVREQDTISRLGGDEF 702 Query: 456 VLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAH 513 VLV D +A+ L N+ ++ I+ LT+SIGI+ G + D L +A Sbjct: 703 VLVLPGTDTDGAAYLAERLLNIAARQYNIERHEINLTVSIGIAMYPTDGTDFDTLWRSAD 762 Query: 514 NAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELY 573 AM +++G N + FF+ M L + AL+ A+ NQ LVYQPQ+ T + Sbjct: 763 AAMYRAKQSGRNDYCFFTTEMQARSARTLQIDNALRRALERNQFSLVYQPQLSLNTNRIV 822 Query: 574 GIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALS 633 G EAL RW P G+ PP FIP+AE G+I IG WV+ A RQL W+ + +S Sbjct: 823 GFEALIRWTHPQFGNTPPDEFIPIAESNGQIIPIGEWVLKTAVRQLRLWQDNGLKDVTIS 882 Query: 634 VNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVG 693 VNLSA+ FR +LP V + G+ L +E+TE + ME+ I LR G+ Sbjct: 883 VNLSAVQFRHPRLPELVMAILEEAGVSPECLQLELTEGVAMENPLAAITVIDELRKKGIR 942 Query: 694 LSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVA 753 +S+DDFGTG+S L+ L V +KID+SFV + +A++ A+ S+ SL + VA Sbjct: 943 ISIDDFGTGYSSLTYLKRFNVYSLKIDRSFVQDLPNDTEDMAIVSAVISLADSLGMITVA 1002 Query: 754 EGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 EGVETKEQ E LR C IQGY+ SRPL A+ + ++ Sbjct: 1003 EGVETKEQLEFLRSRGCTEIQGYYLSRPLQADAVFSFIE 1041 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 84/240 (35%), Gaps = 9/240 (3%) Query: 54 GNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRF----ALSK 109 G + P ++ E + + + S + ++G+ I F L+ Sbjct: 405 GQVVRENKPIWMQDFLHEPAMKHWQKHIEHFKWRSSAILPLHRNGNVIGVMFFYSNVLNA 464 Query: 110 VSAEGKVYYLALVRDA---SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFT 166 + + L LV D ++EQ + +++LDP HIV N AFT Sbjct: 465 FTESSQRLLLELVEDIDFALEHFEKEEQLQLSAQIFAQSSEGIMLLDPNCHIVMVNSAFT 524 Query: 167 EMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKA 226 + GY E G P +L + + + + + R Q E + G Sbjct: 525 HITGYSEEETLGRNP-KMLASGQHDRNFYATMWEAIETEGRWQGEVWNRRKDGSLYPEWL 583 Query: 227 SISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVL 286 I + D L + + TF+D+TE ++ + LA + R+ ++ Sbjct: 584 LIQTMRDSRGTLTHYIGTFTDLTERKETEERV-QWLAHFDPLTGLPNRTLLHIRSNLAIS 642 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 45/138 (32%), Gaps = 9/138 (6%) Query: 9 AADGIFF---PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 + Q+ G +L++ N ++ N A + GY EE +G N ML Sbjct: 488 EKEEQLQLSAQIFAQSSEGIMLLDPNCHIVMVNSAFTHITGYSEEETLGRNPKMLASGQH 547 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYLALVR 123 + E E+ +KDGS W + S +Y+ Sbjct: 548 DRNFYATMWEAIETEGR----WQGEVWNRRKDGSLYPEWLLIQTMRDSRGTLTHYIGTFT 603 Query: 124 DASVEMAQKEQTRQLIIA 141 D + +E+ + L Sbjct: 604 DLTERKETEERVQWLAHF 621 Score = 65.4 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 41/122 (33%), Gaps = 6/122 (4%) Query: 148 PVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTA- 206 ++ + + + N E+FGY E G + L + P R + L + Sbjct: 2 GILSVSLD-KWIHFNDKLCEIFGYTPEEF-GKKGWNELC--DTPCAEENRGIESLKRGDI 57 Query: 207 -RDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAM 265 ++E + G + V LV+T DITE ++ + + Sbjct: 58 DEFREEKAFRRKNGRNAIAEVHFRCVAKDDGAPDYLVVTVEDITERKKAQTEIYRLSQLY 117 Query: 266 CS 267 + Sbjct: 118 AT 119 Score = 58.8 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 10/132 (7%) Query: 24 GAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKAR 83 G + ++ + + + FN +++GY EE + L E R + Sbjct: 2 GILSVSLD-KWIHFNDKLCEIFGYTPEEFGKKGWNELCDT----PCAEENRGIESLKRGD 56 Query: 84 VEGMSRELQLEKKDGS--KIWTRFALSKVSAEGKVYYLALVRDASVEMAQKE---QTRQL 138 ++ E +K+G F Y + V D + + + QL Sbjct: 57 IDEFREEKAFRRKNGRNAIAEVHFRCVAKDDGAPDYLVVTVEDITERKKAQTEIYRLSQL 116 Query: 139 IIAVDHLDRPVI 150 + H ++ ++ Sbjct: 117 YATLSHCNQAIV 128 >UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUG6_METML Length = 836 Score = 798 bits (2062), Expect = 0.0, Method: Composition-based stats. Identities = 186/761 (24%), Positives = 323/761 (42%), Gaps = 42/761 (5%) Query: 57 IDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV 116 +++ P A+ + A L L+ + ++ Sbjct: 83 VNIWYPSYWASAYAKAFTGVVSFATAVAVWWIMPLALKAPSAQSLQVLN--QALARSHAE 140 Query: 117 YYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 + + + + Q+ +L A+DH+ V + D V NR + F + + Sbjct: 141 LETRVQQRTAELTSALNQSHRLSEALDHIPAFVYIKDINGKYVYANRMTLDFFKCSVDDL 200 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYD--V 234 + + +R + ++ + +E ++ +K +P+Y+ Sbjct: 201 VQIDEGKYFSARTLEK-SRSVDKSVIERGEDACEEIEAVSDDDKKRTFLQIKTPIYENEA 259 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNILAAMCSS--PPFHEMGEIICRNIESVLNESHVS 292 + L +DIT + A SS + G I + + + S Sbjct: 260 DRKIWGLCGISTDITALKNAETSLRIAATAFESSDGILITDAGCSILQVNSAFTTITGYS 319 Query: 293 LFALRNGMPIHWASSSH--------GAEIQNAQSWSATI--RQRDGAPAG---ILQIKTS 339 + P +S H + +W I R+++G + Sbjct: 320 AEDVVGKNPRILSSGRHDQLFYQALWDRVNTTGTWCGEIWNRRKNGDIYPERITISEVKD 379 Query: 340 SGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD 399 + + ++ DIS E + S + IE L +DP+T LPNR L + + Sbjct: 380 KDGKVTNYVSVFTDIS--------ESKASSEQIEHLAFYDPLTNLPNRLLLLDRVRQAFS 431 Query: 400 KAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF 455 + + + +DH + + D+LG++ D L R ++ + R G +F Sbjct: 432 SSSRTGKKGALLFVDLDHFKVLNDTLGHSTGDLLLKLQAERLSHCVRAGDTVARFGGDEF 491 Query: 456 VLVSLEND--VSNITQIAD----ELRNVVSKPIMIDDKPFPLTLSIGISYDLGKN--RDY 507 V+V + D + IA+ ++ + + +P + T SIGI+ G + Sbjct: 492 VVVLEDLDRNATEAAAIAEQIGNKILSTLHEPCQFGTHQYQSTSSIGITLFSGDEHEIED 551 Query: 508 LLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFA 567 LL A +M +K G N +FF PAM E + R L + L+ AI QL L YQ Q+ Sbjct: 552 LLKQADISMYQAKKAGRNTLRFFDPAMQEKLSVRASLESELRYAIEKQQLALYYQVQVD- 610 Query: 568 ETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ-N 626 + + G EAL RW P G V P FIP+AEE I ++G WVI AC QLAEW Sbjct: 611 DNQRMVGAEALIRWIHPERGTVSPIEFIPIAEESALILDVGHWVINTACMQLAEWAKSVE 670 Query: 627 IHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQI 686 ++VN+SA FR+ A+ ID +L +E+TES+++E ++ ++ Sbjct: 671 KKHLMIAVNVSAHQFRALDFVQSTQQAIDLHKIDASRLKLELTESVILEDVDDVIAKMHA 730 Query: 687 LRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQS 746 L+ +GV LS+DDFGTG+S LS L LP+ ++KID+SFV + +++ I + + Sbjct: 731 LKALGVKLSLDDFGTGYSSLSYLKKLPLDQVKIDQSFVRDLAYDPNDAIMVKTIIDLANN 790 Query: 747 LNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 + V+AEGVET+ + ++L+ CR+ QGY F RP+P E++ Sbjct: 791 FRINVIAEGVETELELDILKGYGCRLYQGYLFGRPVPIEQL 831 Score = 153 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 87/263 (33%), Gaps = 11/263 (4%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 +LT A N + AL+ + + N + ++ N + ++++ + Sbjct: 151 ELTSALNQS-HRLSEALDHIPAFVYIKDINGKYVYANRMTLDFFKCSVDDLVQIDEGKYF 209 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL-- 119 + E G+ E E++ D K + + + Sbjct: 210 SARTLEKSRSVDKSVIERGEDACE----EIEAVSDDDKKRTFLQIKTPIYENEADRKIWG 265 Query: 120 --ALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 + D + + R A + +++ D I+Q N AFT + GY + Sbjct: 266 LCGISTDITALKNAETSLRIAATAFESS-DGILITDAGCSILQVNSAFTTITGYSAEDVV 324 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 G P +L+ L + T E + G+ + +IS V D Sbjct: 325 GKNP-RILSSGRHDQLFYQALWDRVNTTGTWCGEIWNRRKNGDIYPERITISEVKDKDGK 383 Query: 238 LQNLVMTFSDITEERQIRQLEGN 260 + N V F+DI+E + + + Sbjct: 384 VTNYVSVFTDISESKASSEQIEH 406 Score = 106 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 57/158 (36%), Gaps = 10/158 (6%) Query: 6 ADNAADGIFF--PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 A A+ ++ G ++ + ++ N A + GY E+V+G N +L Sbjct: 275 ALKNAETSLRIAATAFESSDGILITDAGCSILQVNSAFTTITGYSAEDVVGKNPRILSSG 334 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLAL 121 H + E+ +K+G R +S+V + Y+++ Sbjct: 335 R----HDQLFYQALWDRVNTTGTWCGEIWNRRKNGDIYPERITISEVKDKDGKVTNYVSV 390 Query: 122 VRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERH 157 D S A EQ L + +L +++LD R Sbjct: 391 FTDISESKASSEQIEHLAFYDPLTNLPNRLLLLDRVRQ 428 >UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnetospirillum RepID=A4U4T7_9PROT Length = 828 Score = 798 bits (2061), Expect = 0.0, Method: Composition-based stats. Identities = 167/700 (23%), Positives = 295/700 (42%), Gaps = 31/700 (4%) Query: 115 KVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS 174 + + + A K + + V++ D +V+ N AF M GY Sbjct: 122 RRAIFYAIERSHAASALKRSEGRFRALFANAGLGVVLADAHGRMVEANPAFLSMVGYGEV 181 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 E G + + + + ++ +R + L Q + + G IW K + + + + Sbjct: 182 ELRGEKFRDITHPDDIGLNDTLRAEVLDGSRDGFQLTKRYIAKDGRIIWAKLTCTVMREA 241 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICR---NIESVLNESHV 291 V DITE +++ +S + + R + + Sbjct: 242 DGQQPFTVTVVEDITERKRLEDNMRLAATVFENSGDGLFVTDAENRIIHVNPAFTRITGF 301 Query: 292 SLFALRNGMPIHWASSSH--------GAEIQNAQSWSATI--RQRDGAPAGIL---QIKT 338 + + P AS H + W I R++DG + Sbjct: 302 TADEVLGRNPRLLASGRHDHDFFIQLWTVLLRDGKWQGEIWDRRKDGEMFAGWQNIAVVR 361 Query: 339 SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV 398 + + F+ ++DI+ +++ + + DP+T LPNR L + Sbjct: 362 DTDGKVQNFVAVISDITT--------RKQVEERLSYAANHDPLTRLPNRTLFQERLTRAI 413 Query: 399 DKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQ 454 +A + I +D + V D++G+ D L +V R ++ + R+ G + Sbjct: 414 ARASRNHNLVALLFIDLDRFKQVNDTMGHLAGDMLLQQVAERLSSCIRQGDTVARLSGDE 473 Query: 455 FVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLST 511 F ++ + D + + ++ ++ +P+ + ++ SIG+S + LL Sbjct: 474 FTIILEDVQDPRDAAVVGHKVLRLLQEPVALTGGEAHISSSIGVSLYPTDAGDPQTLLKL 533 Query: 512 AHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGE 571 A AM + G N QF S A+N ERL L AL+ A+ Q L YQP ++G Sbjct: 534 ADAAMYRAKHLGRNSCQFHSEAVNAEAFERLALENALRGAVDQGQFLLHYQPIFDVKSGR 593 Query: 572 LYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPA 631 +EAL RW P G V P++F+ LAEE G I IGRWV +ACRQ WR Sbjct: 594 AVAVEALLRWRHPEVGVVAPNQFLALAEETGMIVPIGRWVFDQACRQAKLWRDAGHVDLR 653 Query: 632 LSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMG 691 L +NLS R L V+ A+ + L +E+ E+ +++ + +G Sbjct: 654 LHINLSPRQLRQPDLIEMVAAALEVSQLPPQALVLEVMETCVIDKAFDPSALFARFAALG 713 Query: 692 VGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTV 751 VGL++D+FG+G+S + L LPVT +K+ +SFV + + ++ AI ++ + L++TV Sbjct: 714 VGLAIDEFGSGYSSFAFLRRLPVTILKVAQSFVRNLSSSEDESEIVTAIVALARGLHMTV 773 Query: 752 VAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 VA G+E K Q + L C +QG+ S+PLP E+ ++ Sbjct: 774 VAPGIENKAQLDFLTGFGCDKVQGFLLSKPLPGTEMTEFL 813 Score = 209 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 105/283 (37%), Gaps = 8/283 (2%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A ++G F +G VL + + ++ NPA + GY E+ G + D Sbjct: 137 ALKRSEGRFRALFANAGLGVVLADAHGRMVEANPAFLSMVGYGEVELRGEKFRDITHPDD 196 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS--AEGKVYYLALVR 123 + +G + +G + KDG IW + + + + + + +V Sbjct: 197 IGLNDTLRAEVLDGSR---DGFQLTKRYIAKDGRIIWAKLTCTVMREADGQQPFTVTVVE 253 Query: 124 DASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDT 183 D + ++ R ++ + V D E I+ N AFT + G+ E G P Sbjct: 254 DITERKRLEDNMRLAATVFENSGDGLFVTDAENRIIHVNPAFTRITGFTADEVLGRNP-R 312 Query: 184 LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVM 243 LL D I+L +L + + Q E + GE +I+ V D +QN V Sbjct: 313 LLASGRHDHDFFIQLWTVLLRDGKWQGEIWDRRKDGEMFAGWQNIAVVRDTDGKVQNFVA 372 Query: 244 TFSDITEERQIRQLE--GNILAAMCSSPPFHEMGEIICRNIES 284 SDIT +Q+ + + P E + R I Sbjct: 373 VISDITTRKQVEERLSYAANHDPLTRLPNRTLFQERLTRAIAR 415 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 797 bits (2060), Expect = 0.0, Method: Composition-based stats. Identities = 173/587 (29%), Positives = 284/587 (48%), Gaps = 30/587 (5%) Query: 227 SISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI---ICRNIE 283 S SP+ D LA L+ S E Q + A+ SP + ++ I + Sbjct: 716 SRSPMADELAALERGAHLASLAIERAQTGAWLNKLSQAVEQSPNSIVITDLNANIEYAND 775 Query: 284 SVLNESHVSLFALRNGMPIHWASSS--------HGAEIQNAQSWSATI--RQRDGAPAGI 333 + + + +L + P S ++ + Q W + R++DG Sbjct: 776 AFVKTTGYTLPEVMGKNPRILHSGKTTVETYAAMWTQLNSGQMWRGELINRRKDGTEYVE 835 Query: 334 LQ---IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNL 390 L + + ++ DI+ EQ++ I QL FD +TGLPN+ L Sbjct: 836 LARISPLRHTDGRVTNYLSIKEDIT--------EQKQVEARIRQLAHFDLLTGLPNQTLL 887 Query: 391 HNY----LDDLVDKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQY 446 + + A V + +DH +++ D+LG+ D+ L+ + R + L+ + Sbjct: 888 KDRAGFAMQMAQRSAHHLAVLFLDIDHFKNINDTLGHRIGDELLVHLAKRMKLLLRDEDT 947 Query: 447 LCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKN 504 L R G +F+LV + D +A+++ V+K I+ +T SIGI+ G + Sbjct: 948 LSRFGGDEFILVLPDTDADGAAHVAEKILETVAKTCYIEQHELVVTPSIGIAMYPSDGMD 1007 Query: 505 RDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQ 564 D L +A AM +++G N ++FF+ M RL+L AL++A+S NQ +L YQPQ Sbjct: 1008 FDKLYQSADVAMYRAKQDGRNNFRFFTSEMQARSARRLLLENALRQALSRNQFELHYQPQ 1067 Query: 565 IFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRS 624 I + G++ G EAL RW+ P G + P+ FIP+AEE G I +IG WV+ A +Q+ W+ Sbjct: 1068 ISMQDGKIVGAEALLRWYHPELGSISPAEFIPVAEESGLILSIGEWVLRTAVQQVKRWQD 1127 Query: 625 QNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRI 684 +++NLSA+ FR +L V +H + H + +E+TES+ M++ + Sbjct: 1128 AGHPPVTVAINLSAVQFRQARLSELVMQILHEANLAPHWIELELTESVAMDNPLVAIGVM 1187 Query: 685 QILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIG 744 L G+ +S+DDFGTG+S LS L V ++KID+SFV + A++ AI ++ Sbjct: 1188 NDLHGCGIRMSIDDFGTGYSSLSYLRKFKVNKLKIDQSFVRDLADDIESRAIVTAIITLA 1247 Query: 745 QSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 S+ +AEGVET Q LR C +QGY+FSRPL ++ Sbjct: 1248 SSMGFQTIAEGVETAGQLAFLRLQGCNEVQGYYFSRPLTVALFEAFV 1294 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 62/165 (37%), Gaps = 6/165 (3%) Query: 99 SKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHI 158 S+ L+ + + LA+ R + +L AV+ +++ D +I Sbjct: 716 SRSPMADELAALERGAHLASLAIERAQTGAW-----LNKLSQAVEQSPNSIVITDLNANI 770 Query: 159 VQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRT 218 N AF + GY + E G P +L+ + + + L + E + + Sbjct: 771 EYANDAFVKTTGYTLPEVMGKNP-RILHSGKTTVETYAAMWTQLNSGQMWRGELINRRKD 829 Query: 219 GEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILA 263 G + A ISP+ + N + DITE++Q+ + Sbjct: 830 GTEYVELARISPLRHTDGRVTNYLSIKEDITEQKQVEARIRQLAH 874 Score = 101 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 49/323 (15%), Positives = 110/323 (34%), Gaps = 29/323 (8%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 + +E + +L + +F N A + G EV+ + + + + + Sbjct: 165 YALVVENGLPLGILTERDMAGLFVNGAPVE--GVSLREVMHSPVLTVSHQTPVFEMAGLM 222 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKE 133 + +R V+ L + K+ R A + ++ E L R S+E + Sbjct: 223 QASRYRHLVVVDDAGLVLGMVTL--HKLMARIAATVMNEE------TLRRQESLEHSMHH 274 Query: 134 QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPAD 193 QL + V + + + D E + CN F FG ++ G ++ + Sbjct: 275 AESQLRLIVKTIPDLIWLKDVEGVYLSCNPMFERFFGAIEADIVGKTDYDFVSREQADFF 334 Query: 194 NRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQ 253 +L +E++ G + ++ + SP+++ + L ++ DITE Sbjct: 335 RAHDRAAMLADKPSINEEWVTFADDGHRACLETTKSPMFNAVGQLIGVLGIAHDITER-- 392 Query: 254 IRQLEGNILAAMCSSPPFHEMGEIICRNIESVL-NESHVSLFALRNGMPIHWASSSHGAE 312 LAA ++ + + ++++ + S LFA + + Sbjct: 393 --------LAAAKKIERLTQLYNALSQCNQAIVHSSSEAELFAQICQDAVRFGGLKM--- 441 Query: 313 IQNAQSWSATIRQRDGAPAGILQ 335 +W + G + Sbjct: 442 -----AWVGVVDHDTGWIRPVAS 459 Score = 97.4 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 54/149 (36%), Gaps = 8/149 (5%) Query: 12 GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPE 71 A+EQ+ V+ + N + + N A K GY EV+G N +L Sbjct: 748 NKLSQAVEQSPNSIVITDLNANIEYANDAFVKTTGYTLPEVMGKNPRILHSGKTTVETYA 807 Query: 72 YIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS--AEGKVYYLALVRDASVEM 129 + G + EL +KDG++ +S + YL++ D + + Sbjct: 808 AMWTQLNSG----QMWRGELINRRKDGTEYVELARISPLRHTDGRVTNYLSIKEDITEQK 863 Query: 130 AQKEQTRQL--IIAVDHLDRPVIVLDPER 156 + + RQL + L ++ D Sbjct: 864 QVEARIRQLAHFDLLTGLPNQTLLKDRAG 892 Score = 93.5 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 42/384 (10%), Positives = 98/384 (25%), Gaps = 82/384 (21%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 L + + A+ ++ L + + NP E+ +G +++G + Sbjct: 268 LEHSMHHAESQLRLIVKTIPDLIWLKDVEGVYLSCNPMFERFFGAIEADIVGKTDYDFVS 327 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA--EGKVYYLA 120 R+ + R K ++ E DG + S + + L Sbjct: 328 REQADFFRAHDRAAMLADK---PSINEEWVTFADDGHRACLETTKSPMFNAVGQLIGVLG 384 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 + D + +A ++ +L + L + CN+A Sbjct: 385 IAHDITERLAAAKKIERLTQLYNALSQ-------------CNQA---------------- 415 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 +++ Q + Sbjct: 416 ---IVHSSSEAELFAQICQDAVRFG------------------------------GLKMA 442 Query: 241 LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGM 300 V T + G+ + + + + + R + + Sbjct: 443 WVGVVDHDTGWIRPVASYGDGMDYLQGAQMSVDEASPLGRGP---TGTAIRENRPVWCQD 499 Query: 301 PIHWASSSHGAEIQNAQSW----SATIRQRDGAPAGILQIKTS-----SGAETSAFIERV 351 H ++ +I + W + +R+ +G G + S + E Sbjct: 500 YQHDTATRPWHQIGASYGWGASAALPLRR-NGVAIGAFTLYNSDINGFDDESRTLLTEMA 558 Query: 352 ADISQHMAALALE--QEKSRQHIE 373 DIS + E +++ IE Sbjct: 559 TDISFALDNFERETLRKRLELQIE 582 >UniRef50_A6UJR0 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Alphaproteobacteria RepID=A6UJR0_SINMW Length = 1071 Score = 796 bits (2058), Expect = 0.0, Method: Composition-based stats. Identities = 193/837 (23%), Positives = 342/837 (40%), Gaps = 74/837 (8%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + DA ++ F + + + + + FFN + G E +G +I Sbjct: 259 RAADALRESEARFRAIADDAPVMIWVADPTGDTSFFNRLWLETTGQTEAEALGFGWVDVI 318 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYL 119 D R A E G E +L + DGS W + + Y+ Sbjct: 319 HPDDRQAVQEIFFKATAG----KGPTRSEYRLRRADGSWAWVIDVGQPRFSADGTFLGYV 374 Query: 120 ALVRDASVEMA----QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 V D + A Q+E + D V VLD E + N A +FG Sbjct: 375 GSVLDITDRRAGEIAQQEAQAFIRSIFDSSPDCVRVLDLEGRPLLMNEAGRRIFGLNEDA 434 Query: 176 -ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 +G D++ A + + + E + GE+ + +P+ D Sbjct: 435 PITGQTWDSI--GRASDAHKVEAGWESVRHGKTARFEITVRDAGGEERCMDVIAAPITDN 492 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNILAAMCSS-----------------PPFHEMGEI 277 L ++ + DIT+ + ++ Sbjct: 493 LGKPSRILSIWRDITDAKLASDEISRAQKHAEAAASQLSSVLESTMDSVMLLDADWRVRY 552 Query: 278 ICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRD---------G 328 + N + +L + R R G Sbjct: 553 LNENAKKLLQI-GDEALGKKFWK---LFPEEEMGNFAKHCREVMERRVRSFFEDHLPSLG 608 Query: 329 APAGILQIKTSSGAETSAFIERV-ADISQHMAALALEQEKSRQ-------HIEQLIQFDP 380 T G I DI+ E+ ++ + + + + D Sbjct: 609 RWIEANASPTQDG------ISIFCRDIT--------ERRRAEEDTLLAQKQLAHMARHDM 654 Query: 381 MTGLPNRNNLHNYLDDLVDKAV--SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFR 438 +TGLPNR + ++++ V + +D + + D+LG+ D L +V R Sbjct: 655 LTGLPNRMFFRECFEQALNESRHARMAVLCLDLDGFKAINDTLGHPAGDVLLRQVSQRLI 714 Query: 439 EKLKPDQYLCRIEGTQFVLVSLEN-DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGI 497 + ++ + + R+ G +F ++ +A L + +S+P I+ + SIGI Sbjct: 715 QSVRTTETVARLGGDEFAIIQPLAKSRDEAFHLAQRLIDTLSEPFSIEGAAATVGTSIGI 774 Query: 498 S--YDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNN 555 + + G + D L+ A A+ + +G ++ F AM+ ++ + A+++A++N Sbjct: 775 AFAPEDGTSADELIKAADIALYSAKSSGRGTYRLFDVAMHAQLQAHQQMKVAMRDALANR 834 Query: 556 QLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEA 615 + +L YQP + E+ + EAL RW P G + PS FIP+AEE G I IG W++ EA Sbjct: 835 EFELHYQPLVNLESRCVSCCEALLRWRHPQRGMIAPSEFIPIAEETGAIVLIGEWLLDEA 894 Query: 616 CRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMME 675 CRQ A W + +++VNLS + F+ L V++A+ + +D +L +EITE+++++ Sbjct: 895 CRQAARWPER----VSVAVNLSPVQFKHRNLVGAVANALSSSHLDPARLQLEITETVLLD 950 Query: 676 HDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILA 735 + +Q LR +GV +++DDFGTG+S L L S P +IK+D++FV + LA Sbjct: 951 ESEHNLELLQDLRRLGVKIAMDDFGTGYSSLGYLRSFPFDKIKVDQAFVRDLPHGRESLA 1010 Query: 736 LLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 +++A+ +GQSL +T EGVET++Q ++ +QGY FSRPLPA EI ++ Sbjct: 1011 IVKAVAGLGQSLGMTTTVEGVETEDQLAIVNSEGFDEVQGYLFSRPLPAAEISRLIA 1067 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 64/402 (15%), Positives = 127/402 (31%), Gaps = 34/402 (8%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 + + A++ + ++ + + + EV+ P +L G +E +G + Sbjct: 134 IEETLRASEEHYRSLVDLHPQVPWIADRAGEVLEVGPRWSELTGLGEKETLGKGWAKAVH 193 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWT--RFALSKVSAEGKVYYLA 120 A + R + + E +L G W R A + + E V + Sbjct: 194 PQDAGALQDAWRRSL----TNGTPLDWEYRLLTMTGEYRWFRARAAAKRDADEKIVRWYG 249 Query: 121 LVRDASVEMAQ----KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 L+ D +E + D + V DP NR + E G +EA Sbjct: 250 LLEDVDERRRAADALRESEARFRAIADDAPVMIWVADPTGDTSFFNRLWLETTGQTEAEA 309 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 G +++ + A + + + E+ L G W+ P + Sbjct: 310 LGFGWVDVIHPDDRQA-VQEIFFKATAGKGPTRSEYRLRRADGSWAWVIDVGQPRFSADG 368 Query: 237 HLQNLVMTFSDITEERQIR----QLEGNILAAMCSSPPFHEMGEIICR------NIESVL 286 V + DIT+ R + + I + SSP + ++ R + Sbjct: 369 TFLGYVGSVLDITDRRAGEIAQQEAQAFIRSIFDSSPDCVRVLDLEGRPLLMNEAGRRIF 428 Query: 287 NESHVSLFALRNGMPIHWASSSH-----GAEIQNAQSWSATI--RQRDGAPA---GILQI 336 + + + I AS +H +++ ++ I R G I Sbjct: 429 GLNEDAPITGQTWDSIGRASDAHKVEAGWESVRHGKTARFEITVRDAGGEERCMDVIAAP 488 Query: 337 KTSSGAETSAFIERVADISQHMAAL---ALEQEKSRQHIEQL 375 T + + S + DI+ A + Q+ + QL Sbjct: 489 ITDNLGKPSRILSIWRDITDAKLASDEISRAQKHAEAAASQL 530 Score = 158 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 66/394 (16%), Positives = 128/394 (32%), Gaps = 34/394 (8%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP 67 + +F ++ ++ + +F N AA L R E++G L+P + Sbjct: 11 RRSYNLFQYLMDGVAEPVIVKDAGSRFVFINEAACFLLDKDRNELLGRTDHDLLPTEQAD 70 Query: 68 AHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAE----GKVYYLALVR 123 R G EG E Q+ DG+ VS + + + + Sbjct: 71 KIVALDRVVLSTG----EGHEIEEQITTPDGTSRTLLTKKRPVSIPTGSTEEKFVVVTIV 126 Query: 124 DASVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 D + +E R VD + + D +++ ++E+ G E G Sbjct: 127 DITELRGIEETLRASEEHYRSLVDLHPQVPWIADRAGEVLEVGPRWSELTGLGEKETLGK 186 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 ++ P+ + ++ L E+ LLT TGE W +A + D + Sbjct: 187 GWAKAVH-PQDAGALQDAWRRSLTNGTPLDWEYRLLTMTGEYRWFRARAAAKRDADEKIV 245 Query: 240 NLVMTFSDITEERQI----RQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNES 289 D+ E R+ R+ E A +P + + R ++ Sbjct: 246 RWYGLLEDVDERRRAADALRESEARFRAIADDAPVMIWVADPTGDTSFFNRLWLETTGQT 305 Query: 290 HVSLFALRNGMPIHWASSSHGAEIQNAQSW-------SATIRQRDGAPAGILQI---KTS 339 IH EI + +R+ DG+ A ++ + + S Sbjct: 306 EAEALGFGWVDVIHPDDRQAVQEIFFKATAGKGPTRSEYRLRRADGSWAWVIDVGQPRFS 365 Query: 340 SGAETSAFIERVADISQHMAALALEQEKSRQHIE 373 + ++ V DI+ A +Q +++ I Sbjct: 366 ADGTFLGYVGSVLDITDRRAGEIAQQ-EAQAFIR 398 Score = 82.3 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 38/273 (13%), Positives = 68/273 (24%), Gaps = 24/273 (8%) Query: 126 SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 + E + +D + PVIV D V N A + +E G LL Sbjct: 5 TPEGPSRRSYNLFQYLMDGVAEPVIVKDAGSRFVFINEAACFLLDKDRNELLGRTDHDLL 64 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA--HLQNLVM 243 + + +L + E + T G + PV + +V+ Sbjct: 65 PTEQADKIV-ALDRVVLSTGEGHEIEEQITTPDGTSRTLLTKKRPVSIPTGSTEEKFVVV 123 Query: 244 TFSDITEERQIRQLEGNILAAMCSSPPFHEMGEII----------CRNIESVLNESHVSL 293 T DITE R I + S H I + Sbjct: 124 TIVDITELRGIEETLRASEEHYRSLVDLHPQVPWIADRAGEVLEVGPRWSELTGLGEKET 183 Query: 294 FALRNGMPIHWASSSHGAEIQNAQ-------SWSATIRQRDGAPAG---ILQIKTSSGAE 343 +H + + W + G K + + Sbjct: 184 LGKGWAKAVHPQDAGALQDAWRRSLTNGTPLDWEYRLLTMTGEYRWFRARAAAKRDADEK 243 Query: 344 TSAFIERVADISQHMAALALEQEKSRQHIEQLI 376 + + D+ + A + +S + Sbjct: 244 IVRWYGLLEDVDERRRAADALR-ESEARFRAIA 275 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 796 bits (2058), Expect = 0.0, Method: Composition-based stats. Identities = 182/698 (26%), Positives = 319/698 (45%), Gaps = 39/698 (5%) Query: 123 RDASVEMAQK--EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 RDA + + E +++L + D + + CN + F + G Sbjct: 124 RDARRRIETELLESNLMFRTFMENLPGAAFIKDQDGRYLYCNHGLDKAFNVEKGCSIGKL 183 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 L+ + E R ++L Q+ ++ +G W+ + P+ + Q+ Sbjct: 184 DTELVPL-EVAYKLREMEARVLKAGTALQELEVMSMPSGASYWLS-TKFPLVGENSDSQH 241 Query: 241 LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE---------IICRNIESVLNESHV 291 + DITE ++ Q A+ + + + + E++ S Sbjct: 242 VGGIAIDITERMKVEQDLLLRTRAIEACVNPIVIVDTATPGMPLIYVNGAFETITGYSSE 301 Query: 292 SLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATIR--QRDGAPA----GILQIKTSS 340 L+ A I+ + S +R +DG+ I + +S Sbjct: 302 EAIGRNCKFLQGMDTDQPELGKLRAAIREQRPASVLLRNYHKDGSMFLNELYIAPVSDTS 361 Query: 341 GAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDK 400 G F+ + D++Q ++ ++ +E +D +TGL NRN L+ + + Sbjct: 362 GGAVGHFVGVLYDVTQI--------KRYQEDLEHQANYDTLTGLANRNLLNERTQQALLQ 413 Query: 401 AVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFV 456 A + I +D+ + V DS+G+ D+ + V +R + ++ + RI G +FV Sbjct: 414 ARRHDHFLSLVFIDLDNFKLVNDSMGHGAGDELIANVGSRLQTCVRDGDTVARIGGDEFV 473 Query: 457 LVSLENDVSNI-TQIADELRNVVSKPIMIDDKPFPLTLSIGIS--YDLGKNRDYLLSTAH 513 L+ VS+ + ++ + KP+ I + +T S+G++ + G++ + LL+ A Sbjct: 474 LLLTNQSVSDSNAGVMQRIQAELIKPMWIRGQEIVVTCSMGVARFPEDGEDSESLLANAD 533 Query: 514 NAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELY 573 AM + +G N +QF++ MN ERL L + L A+ N++L LVYQPQI G + Sbjct: 534 TAMYRAKSSGRNNFQFYTKEMNATSGERLSLESDLWHALKNDELFLVYQPQIDLRDGTVI 593 Query: 574 GIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALS 633 G+EAL RW P G + P FIP+AE G I IG WV+ ACR + + + + ++ Sbjct: 594 GMEALIRWQHPKRGLIAPMDFIPMAECNGLIIPIGIWVLETACRHNLQLQKEGLPPIRVA 653 Query: 634 VNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVG 693 +NLSA V + A G+D H L +E+TESM+M + ++ + L MG+ Sbjct: 654 INLSARQLSDRNFVESVQSVIEAIGLDPHYLELEVTESMVMHNVEDVVVTLNDLNKMGIQ 713 Query: 694 LSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVA 753 LS+DDFGTGFS L+ L P+ +KID+SF+ C ++ + + I ++ L + V+A Sbjct: 714 LSLDDFGTGFSSLAYLKRFPIDRLKIDQSFIFNCDSDPGDAIIAQTIIALAHGLKIKVIA 773 Query: 754 EGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 EGVE E L+K C QGYF SRPL +++ ++ Sbjct: 774 EGVEKSEHLSFLKKNGCDEGQGYFISRPLTFDDLRMFL 811 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 41/266 (15%), Positives = 93/266 (34%), Gaps = 10/266 (3%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 ++ ++ +F +E A + +++ ++ N +K + ++ IG L+ Sbjct: 129 RIETELLESNLMFRTFMENLPGAAFIKDQDGRYLYCNHGLDKAFNVEKGCSIGKLDTELV 188 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKVYYLA 120 P ++ E + G A E E+ + G+ W V + Sbjct: 189 PLEVAYKLREMEARVLKAGTALQE---LEV-MSMPSGASYWLSTKFPLVGENSDSQHVGG 244 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLD---PERHIVQCNRAFTEMFGYCISEAS 177 + D + M ++ A++ P++++D P ++ N AF + GY EA Sbjct: 245 IAIDITERMKVEQDLLLRTRAIEACVNPIVIVDTATPGMPLIYVNGAFETITGYSSEEAI 304 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 G L + +L+ + + + G + I+PV D Sbjct: 305 GRNC-KFLQGMDTDQPELGKLRAAIREQRPASVLLRNYHKDGSMFLNELYIAPVSDTSGG 363 Query: 238 LQN-LVMTFSDITEERQIRQLEGNIL 262 V D+T+ ++ ++ + Sbjct: 364 AVGHFVGVLYDVTQIKRYQEDLEHQA 389 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 796 bits (2057), Expect = 0.0, Method: Composition-based stats. Identities = 159/573 (27%), Positives = 276/573 (48%), Gaps = 37/573 (6%) Query: 253 QIRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNESHVSLFA-----LRNGMP 301 + R+ + +S + + + + + + L++G Sbjct: 311 RSRKDLNLARKVIEASLDGIMIVDSTQKIEFVNPAFTHMTGYTAEEIIGKNPNVLKSGHH 370 Query: 302 IHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQ---IKTSSGAETSAFIERVADISQ 356 ++ W I R+++G + + + + +DI+ Sbjct: 371 DETFYKHMYTVLEAQDYWQGEIWNRRKNGEIYPEWLTINVIRDDTGDITQYAAIFSDIT- 429 Query: 357 HMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVD 412 E++K+ + I+ L FD +T LPNR + L + A + + +D Sbjct: 430 -------ERKKTEERIKNLAYFDVLTALPNRRLFTDRLQIAIANAHRHGQQLAIMFLDLD 482 Query: 413 HIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDV-SNITQIA 471 + + DSLG+ DQ L+E R ++ + R+ G +F ++ E D ++ ++A Sbjct: 483 LFKRINDSLGHGVGDQVLVETAARISHCVREGDTVARLGGDEFTVLLPELDHLEDVAKLA 542 Query: 472 DELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQF 529 + + V +P ++DD +T SIGI+ G + L+ A AM + G N +Q Sbjct: 543 ERVIAHVKQPFLVDDNELYVTTSIGIAVYPEDGTTVEALIKNADTAMYRAKDLGRNSYQL 602 Query: 530 FSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHV 589 ++ AMN ERL + ++L+ A++ + +LVYQ ++ +E G + G+EAL RWH P G V Sbjct: 603 YTAAMNARSFERLTMESSLRHALTREEFRLVYQVKVDSEDGRMSGVEALVRWHHPEMGLV 662 Query: 590 PPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQ 649 P FIPLAE +G I +IG WV+ ACRQ W + ++VN+SA F +P Sbjct: 663 SPVDFIPLAEAMGVISDIGEWVLRTACRQCKHWMDLGLPPVRIAVNVSAQQFVETDVPEV 722 Query: 650 VSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRL 709 V+ A+ G+ L +E+TE+++M+ E+ ++ LR MGV +S+DDFGTG+S LS L Sbjct: 723 VARALRETGLPPQYLELELTETVLMQRVDEVVAVLKSLRAMGVRISIDDFGTGYSSLSYL 782 Query: 710 VSLPVTEIKIDKSFVDRCLTE-----KRILALLEAITSIGQSLNLTVVAEGVETKEQFEM 764 +P+ +K+D+SFV+ + ++ I ++ +L L +AEGVET EQ E Sbjct: 783 KRMPIDALKVDRSFVNDIFDGQSKVTEDGAEIVSTIINLAHNLKLKAIAEGVETPEQAEF 842 Query: 765 LRKIHCRVIQGYFFSRPLPAEEIPGWM-SSVLP 796 LR C +QGY SRP+ E++ ++LP Sbjct: 843 LRSKGCDEVQGYLISRPVSGEDLISLFDRNLLP 875 Score = 120 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 40/220 (18%), Positives = 76/220 (34%), Gaps = 12/220 (5%) Query: 75 HNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL-----ALVRDASVEM 129 + R + + + DG + + S + A + Y+ AL + + Sbjct: 252 SLLAARAMLEQKHIRHIGITRMDGELVGL-LSFSDILATLQYEYVHRLDEALKERDAALL 310 Query: 130 AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE 189 ++ ++ ++++D + I N AFT M GY E G P +L Sbjct: 311 RSRKDLNLARKVIEASLDGIMIVDSTQKIEFVNPAFTHMTGYTAEEIIGKNP-NVLKSGH 369 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 + +L Q E + GE +I+ + D + FSDIT Sbjct: 370 HDETFYKHMYTVLEAQDYWQGEIWNRRKNGEIYPEWLTINVIRDDTGDITQYAAIFSDIT 429 Query: 250 EERQIRQLEGN-----ILAAMCSSPPFHEMGEIICRNIES 284 E ++ + N +L A+ + F + +I N Sbjct: 430 ERKKTEERIKNLAYFDVLTALPNRRLFTDRLQIAIANAHR 469 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 59/167 (35%), Gaps = 18/167 (10%) Query: 2 KLTDADNAADGIF----------FPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREE 51 +L +A D +E ++ G ++++ ++ F NPA + GY EE Sbjct: 297 RLDEALKERDAALLRSRKDLNLARKVIEASLDGIMIVDSTQKIEFVNPAFTHMTGYTAEE 356 Query: 52 VIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSK 109 +IG N ++L +++ E E+ +K+G W + + Sbjct: 357 IIGKNPNVLKSGHHDETFYKHMYTVLEAQDY----WQGEIWNRRKNGEIYPEWLTINVIR 412 Query: 110 VSAEGKVYYLALVRDASVEMAQKEQTRQL--IIAVDHLDRPVIVLDP 154 Y A+ D + +E+ + L + L + D Sbjct: 413 DDTGDITQYAAIFSDITERKKTEERIKNLAYFDVLTALPNRRLFTDR 459 >UniRef50_B6BGA2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGA2_9PROT Length = 802 Score = 794 bits (2052), Expect = 0.0, Method: Composition-based stats. Identities = 199/806 (24%), Positives = 353/806 (43%), Gaps = 47/806 (5%) Query: 17 ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHN 76 L + + N +F N KL G + +IG N P ++ + N Sbjct: 10 ILNSLEQNIFVKDLNSNYLFVNSTYAKLVGKEATAIIGKNDLDFFPEEI-----AFKYQN 64 Query: 77 REGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV-YYLALVRDASVEMAQKEQ- 134 + + + + ++ DG R + G+V L + D + +KE Sbjct: 65 DDSLVIKNKQIIDTVESILIDGKYKTIRTVKKPLYFNGEVSAVLGIFWDITEFNEEKEHF 124 Query: 135 ---TRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL--NIPE 189 L A + + L+ + + + +FG E G + L P+ Sbjct: 125 KKLEYGLSKAQELANIGHWELNLVTNDLFWSDEVYRIFGLKPQEF-GATYEAFLEHIHPD 183 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 + ++ + GE +++ +D ++ + T DIT Sbjct: 184 DVELVNSSYSDSITNRCGYHVTHRIVRKNGEVGFVEERCEHEFDNDGNVLRSIGTVHDIT 243 Query: 250 EERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESHVSLFALR-----N 298 +++ + + + I + + ++ L + + Sbjct: 244 KQKIAQNELMLASEVFSKMSDGVVITDANQSIIKINESFTKITGYTNEELIGMTPKAFSS 303 Query: 299 GMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPA----GILQIKTSSGAETSAFIERVA 352 G +I+ WS I R++ I+ + + +I Sbjct: 304 GWHDEAFYKKMWDDIKQNGQWSGEIIDRKKSSERYIAEMNIIALHNDD-GILTNYISITN 362 Query: 353 DISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYL 408 DIS+ +++ + I L FD +T LPNR + + + + Sbjct: 363 DISK--------KKEQEKLIHNLAYFDSLTDLPNRVLFEERVVSRIPFSKRHDKKMALLF 414 Query: 409 IGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNI 467 I +D+ ++V D+LG+ D L+EV N + ++ L R+ G +F ++ + N + +I Sbjct: 415 IDMDNFKNVNDTLGHFMGDMFLIEVSNIIKNSIREQDTLARLGGDEFTVLLEDINSIMDI 474 Query: 468 TQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGN 525 IA+++ + P++I+ K +S+GIS D GK+ + L A AM ++ +G N Sbjct: 475 VPIAEKIIAAFNNPVLIESKELYTGISMGISLYPDDGKSYNELFKAADTAMYQVKASGKN 534 Query: 526 GWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPL 585 +QFF +MNE + ERL L +L+ AI NN+L LVYQP+I ET +YG+EAL RW P Sbjct: 535 NFQFFKQSMNEKITERLFLENSLRNAIGNNELFLVYQPKINLETKRVYGMEALIRWRHPE 594 Query: 586 HGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQ 645 G + P +FI ++EE G+I NIG WV +A HI +S+N+S+ + + Sbjct: 595 IGLIRPDKFISISEETGQIYNIGLWVAKQAIIDTKALHEAG-HILTVSINVSSKQLENEK 653 Query: 646 LPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSG 705 + + ++ GID + +EITES +M + + K + L D G LS+DDFGTG+S Sbjct: 654 FIDDICCVVNEIGIDKSYVELEITESHIMSNIDKALKILNELSDKGFKLSIDDFGTGYSS 713 Query: 706 LSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEML 765 LS L LP IKID+SFV ++ +++ I ++ ++L V+AEG ET+E + L Sbjct: 714 LSYLKKLPAQTIKIDRSFVLDIYKDEDDRSIVATIIAMAKALGKDVIAEGSETQEHIDTL 773 Query: 766 RKIHCRVIQGYFFSRPLPAEEIPGWM 791 + +HC +QGYFFS+P+ +E ++ Sbjct: 774 KYLHCNKVQGYFFSKPIEIDEFKEFV 799 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 101/270 (37%), Gaps = 12/270 (4%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 A E +G +N +F++ +++G K +E G + + + P E + Sbjct: 131 LSKAQELANIGHWELNLVTNDLFWSDEVYRIFGLKPQEF-GATYEAFL-EHIHPDDVELV 188 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSK--VSAEGKVYYLALVRDASVEMAQ 131 + G ++ +K+G + + + + V D + + Sbjct: 189 NSSYSDSITNRCGYHVTHRIVRKNGEVGFVEERCEHEFDNDGNVLRSIGTVHDITKQKIA 248 Query: 132 KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFP 191 + + + V++ D + I++ N +FT++ GY E GM P + Sbjct: 249 QNELMLASEVFSKMSDGVVITDANQSIIKINESFTKITGYTNEELIGMTPKA-FSSGWHD 307 Query: 192 ADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEE 251 ++ + + + E + ++ E+ + +I +++ L N + +DI+++ Sbjct: 308 EAFYKKMWDDIKQNGQWSGEIIDRKKSSERYIAEMNIIALHNDDGILTNYISITNDISKK 367 Query: 252 RQIRQLEGNILAAMCSSPPFHEMGEIICRN 281 ++ +L N+ F + ++ R Sbjct: 368 KEQEKLIHNLAY-------FDSLTDLPNRV 390 Score = 76.9 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 32/253 (12%), Positives = 74/253 (29%), Gaps = 25/253 (9%) Query: 139 IIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRL 198 + ++ L++ + V D + + N + ++ G + G A Sbjct: 8 NLILNSLEQNIFVKDLNSNYLFVNSTYAKLVGKEATAIIGKNDLDFFPEEI--AFKYQND 65 Query: 199 QQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLE 258 L+ K + D + G+ I+ P+Y + ++ F DITE + ++ Sbjct: 66 DSLVIKNKQIIDTVESILIDGKYKTIRTVKKPLYF-NGEVSAVLGIFWDITEFNEEKEHF 124 Query: 259 GNILAAM--CSSPPFHEMGEIICRNIESVLNESHVSLFALRNG----------MPIHWAS 306 + + E+ + ++ +F L+ IH Sbjct: 125 KKLEYGLSKAQELANIGHWELNLVTNDLFWSDEVYRIFGLKPQEFGATYEAFLEHIHPDD 184 Query: 307 SSHGAEIQN-------AQSWSATIRQRDGAPAGILQIK---TSSGAETSAFIERVADISQ 356 + + I +++G + + + I V DI++ Sbjct: 185 VELVNSSYSDSITNRCGYHVTHRIVRKNGEVGFVEERCEHEFDNDGNVLRSIGTVHDITK 244 Query: 357 HMAALALEQEKSR 369 A S Sbjct: 245 QKIAQNELMLASE 257 >UniRef50_Q21WZ6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=Q21WZ6_RHOFD Length = 1355 Score = 794 bits (2051), Expect = 0.0, Method: Composition-based stats. Identities = 192/705 (27%), Positives = 314/705 (44%), Gaps = 35/705 (4%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 +VR E A E ++ + D+ + +D + + + ++ G+ +E Sbjct: 383 IVRQRRAETALHESEQRHRLLADNASDVIWTMDLKGRFTYVSPSVEKLRGFTSAEVMQQT 442 Query: 181 PDTLLNIPEFPADNRIR---LQQLLWKTA--RDQDEFLLLTRTGEKIWIKASISPVYDVL 235 L P + + + E + G +W + S + + + Sbjct: 443 LAQTLCPSSIPVATEALGKSMASMAAGLPFIGFRGELEQPCKDGSTVWTEISTNGMRNEQ 502 Query: 236 AHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNES 289 +V +ITE + +Q + + ++ R + + Sbjct: 503 GDFVGIVGVSRNITERKAQQQQLQLAAQVFAQGREGITVTDARGHIIMVNRAFSEITGYT 562 Query: 290 HVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGIL---QIKTS 339 + L++ + + W+ + R++DG Sbjct: 563 QAEVLGQNPRILKSERQSPEFYLDMWTALTTSGHWAGEMWNRKKDGTVYPEWMAISALRD 622 Query: 340 SGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD 399 S T+ ++ +D+S + + I+ L QFD +TGLPNR L + + Sbjct: 623 SQGLTTHYVASFSDLSTA--------KAAESRIQWLSQFDTLTGLPNRTLLQDRTALALS 674 Query: 400 KAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF 455 + L+ +DH V D+LG+ D+ L+E+ R + ++ + R+ G +F Sbjct: 675 MVQRAREPLTMLLVAIDHFGAVNDTLGHQLGDELLVEMARRLSDSVREQDTVSRMGGKEF 734 Query: 456 VLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGIS--YDLGKNRDYLLSTAH 513 VLV +A EL +S+P + LT SIGI+ D G + D L Sbjct: 735 VLVLPGTPAMGAAHLATELLWKLSRPCSLGMHELTLTASIGIASFPDNGADFDTLFKAVE 794 Query: 514 NAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELY 573 AM + G + +QF+S M E V L AL++AI +QL+LVYQPQ+ +TG++ Sbjct: 795 IAMHRAQLKGRDTYQFYSDDMYEQVLAHDRLIKALRQAIVLDQLQLVYQPQVDLQTGQIC 854 Query: 574 GIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALS 633 G+EAL RW P G V P +FIPLAEE G I IG WV+ AC+ + W I +P ++ Sbjct: 855 GVEALLRWQHPELGAVSPGQFIPLAEESGLIIGIGEWVLRRACQDIRRWLDHGIKVPHVA 914 Query: 634 VNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVG 693 +N S L FR N L QV A+ ID + +E+TES +M+ ++ L+D+G+ Sbjct: 915 INASPLQFRDNNLVLQVKAALTESQIDPALIYIEVTESALMDDVPRNEAMLKALKDLGIK 974 Query: 694 LSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVA 753 LS+DDFGTG+S LS L P ++KID+SFV T + L++ I S+ L + V+A Sbjct: 975 LSLDDFGTGYSSLSYLKRFPFDQVKIDQSFVRDIATSQSDSLLVKVIVSMAHGLGMKVIA 1034 Query: 754 EGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLK 798 EGVET+ Q E++R C IQGYFF +P+ A+ I S L Sbjct: 1035 EGVETEAQCEIMRTSICDEIQGYFFCKPISAQAIEELFSEGRQLP 1079 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 99/266 (37%), Gaps = 5/266 (1%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + A + ++ + ++ + +P+ EKL G+ EV+ + + Sbjct: 388 RAETALHESEQRHRLLADNASDVIWTMDLKGRFTYVSPSVEKLRGFTSAEVMQQTLAQTL 447 Query: 62 PRDLRPAHPEYIRHNREGGKARVE--GMSRELQLEKKDGSKIWTRFALSKVSAEGK--VY 117 P E + + A + G EL+ KDGS +WT + + + E V Sbjct: 448 CPSSIPVATEALGKSMASMAAGLPFIGFRGELEQPCKDGSTVWTEISTNGMRNEQGDFVG 507 Query: 118 YLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 + + R+ + AQ++Q + + V D HI+ NRAF+E+ GY +E Sbjct: 508 IVGVSRNITERKAQQQQLQLAAQVFAQGREGITVTDARGHIIMVNRAFSEITGYTQAEVL 567 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 G P +L + + + L + E + G +IS + D Sbjct: 568 GQNP-RILKSERQSPEFYLDMWTALTTSGHWAGEMWNRKKDGTVYPEWMAISALRDSQGL 626 Query: 238 LQNLVMTFSDITEERQIRQLEGNILA 263 + V +FSD++ + + Sbjct: 627 TTHYVASFSDLSTAKAAESRIQWLSQ 652 Score = 92.7 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 59/194 (30%), Gaps = 5/194 (2%) Query: 119 LALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 +A +R+ + + L +D + D + N T + G A G Sbjct: 86 VASMREQEAQAENHRSQQLLTALIDSSTDAIFAKDLAGRYLLFNHETTRVMGTTPERALG 145 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 L PE R Q++L E L T GE++ A+ P+ D + Sbjct: 146 HDDTALF-PPEQAELIRANDQRVLALNRTTSYEETLETVDGERV-FLATKGPLRDSNGQV 203 Query: 239 QNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRN 298 L DIT+ ++ + EI+ + + L Sbjct: 204 IGLFGISRDITDRKRDETRLTLEARRAEALLTLPGAAEIMTESAFM---QHGQELAEQLT 260 Query: 299 GMPIHWASSSHGAE 312 G I + H + Sbjct: 261 GSQIAFIHLVHDDQ 274 Score = 88.5 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 51/440 (11%), Positives = 117/440 (26%), Gaps = 83/440 (18%) Query: 1 MKLTDAD---NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNI 57 M+ +A + + + ++ + + + FN ++ G E +G++ Sbjct: 89 MREQEAQAENHRSQQLLTALIDSSTDAIFAKDLAGRYLLFNHETTRVMGTTPERALGHDD 148 Query: 58 DMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK-V 116 L P + E IR N + A S E LE DG +++ + G+ + Sbjct: 149 TALFPPEQ----AELIRANDQRVLALNRTTSYEETLETVDGERVFLATKGPLRDSNGQVI 204 Query: 117 YYLALVRDASVEMAQKEQTRQLIIAVDHLDR--PVIVLDPERHIVQCNRA-FTEMFGYCI 173 + RD + + + + L + E +Q + ++ G I Sbjct: 205 GLFGISRDITDRKRDETRLTLEARRAEALLTLPGAAEIMTESAFMQHGQELAEQLTGSQI 264 Query: 174 S------------EASGMQPDTLLNI-----PEFPADNRIRLQQ---------------- 200 + E TL ++ R+ Sbjct: 265 AFIHLVHDDQETIELVNWSRSTLAQYCTSAFDRHYPVSQARIWADALRLRTSVVINDYAS 324 Query: 201 LLWKTARDQDEFLLLTR------TGEKIWIKA----SISPVYDVLAHLQNLVM-----TF 245 ++ K + L G + + A P + L+ Sbjct: 325 VMGKHGLPEGHAQLDRLINVPVIDGGLVRMMAGVGNKPEPYTEADVETVRLIADAVWRIV 384 Query: 246 SDITEERQIRQLEGNILAAMCSSPPFHEMGEIICR------NIESVLNESHVSLFALRNG 299 E + + E ++ ++ R ++E + + + Sbjct: 385 RQRRAETALHESEQRHRLLADNASDVIWTMDLKGRFTYVSPSVEKLRGFTSAEVMQQTLA 444 Query: 300 MPIHWASSSHGAEIQNAQS-----------WSATIRQ--RDGAPAGILQIKTSSGAETSA 346 + +S E + + Q +DG+ E Sbjct: 445 QTLCPSSIPVATEALGKSMASMAAGLPFIGFRGELEQPCKDGSTVWTEISTNGMRNEQGD 504 Query: 347 FIERVADISQHMAALALEQE 366 F+ V ++ E++ Sbjct: 505 FVGIV-----GVSRNITERK 519 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 793 bits (2050), Expect = 0.0, Method: Composition-based stats. Identities = 196/883 (22%), Positives = 340/883 (38%), Gaps = 112/883 (12%) Query: 12 GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPE 71 L+ ++ + + E E ++G +D ++P Sbjct: 130 RQLGATLDAIPDLLFEMDGEGRYLAVHANREAQLQRPVEALLGRRVDEVLPAPAAQTCLA 189 Query: 72 YIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV-YYLALVRDASVEMA 130 + G + + + + D W ++++ + +G +++ L RD + Sbjct: 190 ALAEAGRHGWSSGQQIEITI-----DNQPQWFELSVARKADDGGPAHFIVLSRDITARRR 244 Query: 131 QK---EQTRQLIIAVDHLDRPVIVLDPERHIVQ--------------------------C 161 + ++ +L + ++ ++ + +++ Sbjct: 245 AEASVQRLSRLYATLSQCNQAIVRCASQDDLLRQICHDAVVFGEMKMVWIGLLDERDGMV 304 Query: 162 NRAFTEMFGYCISEASGMQPDTL---------------LNIPEFPADNRIRLQQLLWKTA 206 + A +G G++ L+ P + D W Sbjct: 305 HPAAA--YGDGTEYLDGIRIAFDSASPFGRGPSGSALRLDKPVWCQDFANDPATSAWHER 362 Query: 207 RDQDEFLL-----LTRTGEKIWIK--ASISPVYDVLAHLQNLVMTFSDI----------T 249 + + L R G+ + + A + LV DI Sbjct: 363 GARHGYRASAALPLHRGGKVFGVLNLYAGECHAFDEAAQRLLVEMAMDIDFALDRFEQDA 422 Query: 250 EERQIR----QLEGNILAAMCSSPPFHEMGEIICRNI-------ESVLNESHVSLFALRN 298 E ++ E S + R + + L Sbjct: 423 ERARLAAAIVDSEEKYRELTESINDVIWTVDPETRCFSYVSPAMRRLSGYAPHELIDAPI 482 Query: 299 GMPIHWAS-----SSHGAEIQN----------AQSWSATIRQRDGAPAGILQIKTSSGAE 343 + + + +RDG + T Sbjct: 483 ERLLKPEYVAEMRERMALHLAEFHVGKRKSEDYSVEEVELGRRDGGTVWAEVVTTLGLNR 542 Query: 344 TSAFI---ERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDK 400 S + DIS E+ + I++L +D +TGLPNR+ + + Sbjct: 543 RSGRVEFRAVARDIS--------ERRAAEAEIQRLAHYDQLTGLPNRSLVKDRFRYAASL 594 Query: 401 AVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFV 456 V +DH +++ D+LG+ + D+ L+EV R L+ +CR+ G +FV Sbjct: 595 TQRRRGQLAVMFFDLDHFKNINDTLGHDFGDRLLVEVARRLESVLRGGDTVCRLGGDEFV 654 Query: 457 LVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHN 514 + + D ++A +L V++P+++D + +T SIGI+ D G + D L A Sbjct: 655 FLLPDTDAEGAARVAAKLLEAVAQPLVLDHQELTVTPSIGIAMYPDDGTDFDTLSRNADA 714 Query: 515 AMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYG 574 AM ++ G NG++FF+ AM L+L AL+ A+ Q L YQPQ+ G + G Sbjct: 715 AMYQAKREGRNGFRFFTEAMQARSTRTLLLANALRHALDRGQFSLHYQPQVSLADGRVVG 774 Query: 575 IEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSV 634 EAL RW P G V P F+P+AE G I IG WV+ EA Q W + + ++V Sbjct: 775 AEALLRWTHPEFGPVSPGEFVPIAESNGLIAQIGEWVLREAVAQSRRWLDEGLPPLVMAV 834 Query: 635 NLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGL 694 NLSA FR+ LP VS + G+ HQ+ +E+TE++ M+ + + L G+ + Sbjct: 835 NLSAAQFRNPNLPELVSQVIEEAGLPPHQVELELTEAVAMDDPQSAVRVMDALFARGIRM 894 Query: 695 SVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAE 754 S+DDFGTG+S L L V ++KID+SFV + A++ AI + SL + VAE Sbjct: 895 SIDDFGTGYSSLGYLKRFKVGKLKIDQSFVRDIGDDPDDKAIVSAIIHLAGSLGMLTVAE 954 Query: 755 GVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPL 797 GVET +Q + LR+ C +QGY+FSRPLPAE G++ L Sbjct: 955 GVETLDQLDFLRQQGCDTVQGYYFSRPLPAEAFVGYLQESGAL 997 Score = 97.0 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 39/263 (14%), Positives = 87/263 (33%), Gaps = 24/263 (9%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDE-VMFFNPAAEKLWGYKREEVIGNNIDML 60 +L A ++ + E ++ + +PA +L GY E+I I+ L Sbjct: 426 RLAAAIVDSEEKYRELTESINDVIWTVDPETRCFSYVSPAMRRLSGYAPHELIDAPIERL 485 Query: 61 IPRDLRPAHPEYIRHNREG---GKARVEGMSR-ELQLEKKDGSKIWTRF--ALSKVSAEG 114 + + E + + GK + E S E++L ++DG +W L G Sbjct: 486 LKPEYVAEMRERMALHLAEFHVGKRKSEDYSVEEVELGRRDGGTVWAEVVTTLGLNRRSG 545 Query: 115 KVYYLALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIVQCNRAFTEMFGYC 172 +V + A+ RD S A + + ++L + L +V D + Sbjct: 546 RVEFRAVARDISERRAAEAEIQRLAHYDQLTGLPNRSLVKD---RFRY----AASLTQRR 598 Query: 173 ISEASGM-----QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKAS 227 + + M + + +R+ ++ + + + G++ Sbjct: 599 RGQLAVMFFDLDHFKNINDTLGHDFGDRLLVEVARRLESVLRGGDTVCRLGGDEF---VF 655 Query: 228 ISPVYDVLAHLQNLVMTFSDITE 250 + P D + + + Sbjct: 656 LLPDTDAEGAARVAAKLLEAVAQ 678 Score = 68.9 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 21/159 (13%), Positives = 48/159 (30%), Gaps = 5/159 (3%) Query: 109 KVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEM 168 + G + A VR + + RQL +D + + +D E + + Sbjct: 105 ALLFGGVLLLRARVRART--RELEGVNRQLGATLDAIPDLLFEMDGEGRYLAVHANREAQ 162 Query: 169 FGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASI 228 + G + D +L P + + + + +T + W + S+ Sbjct: 163 LQRPVEALLGRRVDEVLPAPAAQTCLAALAEA--GRHGWSSGQQIEITIDNQPQWFELSV 220 Query: 229 SPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCS 267 + ++ DIT R+ + + Sbjct: 221 -ARKADDGGPAHFIVLSRDITARRRAEASVQRLSRLYAT 258 >UniRef50_Q118H0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Trichodesmium erythraeum IMS101 RepID=Q118H0_TRIEI Length = 866 Score = 793 bits (2050), Expect = 0.0, Method: Composition-based stats. Identities = 185/872 (21%), Positives = 352/872 (40%), Gaps = 92/872 (10%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINE-NDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + ++ ++ + ++ + ++F N ++G IG Sbjct: 1 MEKIQKKSEELWEIFTKLIPAAILISRAVDGIIIFHNEFLGVIFGLSNYNFIGFPTSNFY 60 Query: 62 --PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL 119 P++ + + + E+ L+K DG+ W + ++S + G+ L Sbjct: 61 FSPQEYEFLLANFYGEVMLPNSKKKQTFDCEVYLKKIDGTPFWAKVSMSYIKFNGETAIL 120 Query: 120 ALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 +++ + + + ++ + ++L VI+ D + +IV N A T MFGY +E G Sbjct: 121 SVLSPSLEDTLIQRSLQKKALIFEYLYDGVILTDTQGNIVDWNSAATRMFGYSKTEVLGK 180 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 P +L+ PE + + + + + E + + G + + ++ P+ D + Sbjct: 181 SP-AILHKPEIASVLTKEIIERIKVNDKWIGEINFIRKDGSEGICETTVVPILDQQNQMV 239 Query: 240 NLVMTFSDITEERQIRQL------------EGNILAAMCSSPPFHEMGEI-----ICRNI 282 + DIT++++ ++ E + +SP + + I Sbjct: 240 GSIGVNRDITQQKRAQEFALQQAEAALKESEERYHRLVKNSPEAIAVNYMEKIVYINAAG 299 Query: 283 ESVLNES-HVSLFALRNGMPIHWASSSHGAEIQNAQSWSAT--------IRQRDGAPAGI 333 + + + I + + + +G + Sbjct: 300 AKLFGANCPDEIIGQLLRKFIPSELIETEKQRLQQVQEQGMETHLQEEKLIKLNGEIIDV 359 Query: 334 LQI---KTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNL 390 + T G + I + DI+ ++K++ + D +TGLPNR Sbjct: 360 EILGIPYTYDGKAATQII--LKDITH--------RKKTQAKLVYDALHDTLTGLPNRALF 409 Query: 391 HNYLDDLVDKAV-----SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQ 445 L + ++ V + +D + + DSLG+ D+ L+ + R + +K Sbjct: 410 FERLKLALCRSRKQPNYQFNVLFLDLDRFKVINDSLGHTIGDRLLIAISKRLQNCIKASD 469 Query: 446 YLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGIS------ 498 L R+ G +F ++ +++ + T++A + + +PI ++ T SIGI Sbjct: 470 TLARLGGDEFTILLESPSNLQDATKVAGRIHQELVRPIYLEGNEIFTTASIGIVTNRRNF 529 Query: 499 YDLGKN-----------RDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAA 547 + + LL A AM + G + F M+ L L Sbjct: 530 IEDIDENHPLICPIYNKPEDLLRDADIAMYRAKTLGKARHEVFDLTMHREAISLLQLEND 589 Query: 548 LKEAIS-------NNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEE 600 L+ AI N+Q L YQP I TG + G E+L RW P G + P +FIPLAEE Sbjct: 590 LRRAIEIIKQNPVNSQFILNYQPIICLNTGIITGFESLLRWAHPTRGLIYPGQFIPLAEE 649 Query: 601 IGEIENIGRWVIAEACRQLAEWRSQ-----------------NIHIPALSVNLSALHFRS 643 G I +G W++ C QL W+ + +SVNLS+ H Sbjct: 650 TGLIVPLGMWILRSVCHQLTTWQQECSTKYDSGCCMYSSCQFPTDNFTVSVNLSSKHLSQ 709 Query: 644 NQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGF 703 L +++ + L +EITE+++ME+ + + + L++ + L +DDFGTG+ Sbjct: 710 PNLLEEINTILEETNCQPSYLELEITETLIMENVSLATQILNKLKNKNIKLLIDDFGTGY 769 Query: 704 SGLSRLVSLPVTEIKIDKSFVDRCLTEKRILA--LLEAITSIGQSLNLTVVAEGVETKEQ 761 S LS L P+ IKID+SFV R ++ ++ AI + +L L ++AEG+ET+ Q Sbjct: 770 SSLSYLHQFPIDSIKIDRSFVSRLDSDTSGQTCKIVGAIIGLANNLGLEIIAEGIETRTQ 829 Query: 762 FEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 + L+K+ C QGY FS+PL E+ + + Sbjct: 830 MQKLKKLQCNKGQGYLFSKPLEGEDATKLLRN 861 Score = 85.4 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 59/149 (39%), Gaps = 7/149 (4%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYK-REEVIGNNIDML 60 + A ++ + ++ + + ++++ N A KL+G +E+IG + Sbjct: 261 QAEAALKESEERYHRLVKNSPEAIAVNYME-KIVYINAAGAKLFGANCPDEIIGQLLRKF 319 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA 120 IP +L + ++ +E G +E +E +L K +G I + +GK Sbjct: 320 IPSELIETEKQRLQQVQEQG---METHLQEEKLIKLNGEIIDVEILGIPYTYDGKAATQI 376 Query: 121 LVRDASVEMAQKEQT--RQLIIAVDHLDR 147 +++D + + + L + L Sbjct: 377 ILKDITHRKKTQAKLVYDALHDTLTGLPN 405 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 793 bits (2049), Expect = 0.0, Method: Composition-based stats. Identities = 188/758 (24%), Positives = 320/758 (42%), Gaps = 38/758 (5%) Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFA-LSKVSAEGKVYYLALVRD 124 R + A+ G + L L G A L+++ K + L Sbjct: 234 RSLALPNGQWTLGLTPAQGWGAAGVLALRCALGLLFALLMAYLARLLFALKAHERGLADQ 293 Query: 125 ASVEM-AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQC-NRAFTEMFGYCISEASGMQPD 182 + + + +QL +D + P+ +D + ++ + G + G Sbjct: 294 VAQRISEIQATQQQLRATIDAIPDPLFEIDQDGRYCSVHSQRAELLMG-PAEQLIGRNVT 352 Query: 183 TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 +L + + + + + L L W + S + ++ Sbjct: 353 EVLPTLAALSVLDVLHEAQAQGWSVGRQIMLDL-PDLGPTWFELSAARKPQAAGAKPRII 411 Query: 243 MTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESHVSLFAL 296 + DITE ++ ++ S + + I R + Sbjct: 412 LLSRDITERKRSQEQLQLTAQVFDQSSEAIVIADASHRIVRINRAFSRITGYQESEAVGQ 471 Query: 297 RNGMPIHWASSSH------GAEIQNAQSWSAT--IRQRDGA----PAGILQIKT-SSGAE 343 + + A + + W R++DG+ + ++ + Sbjct: 472 SVRLLTMAEAGPDCNADAVYARLARQERWEGESWGRRKDGSGYPQWLSVSSVRDGDANGP 531 Query: 344 TSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV- 402 + I DIS Q ++++ I++L FDP+T LPNR L + + Sbjct: 532 ITHSITLFRDISL--------QREAQERIQRLAHFDPLTDLPNRVLLAERTQRQIAQEQA 583 Query: 403 ---SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVS 459 + + +DH ++V DSLG+ D L+ V R + + P + R+ G +F+L+ Sbjct: 584 RGGQLALLFLDLDHFKNVNDSLGHRIGDILLVAVARRLQSLIGPQDTVSRLGGDEFLLLL 643 Query: 460 LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMD 517 ++ ++A L V++P ID TLS+GI+ G++ D L A AM Sbjct: 644 PATSAAHAAKVASALLTAVAQPFQIDPYELSTTLSVGIAMCPADGESFDTLYQRADAAMY 703 Query: 518 YIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEA 577 +++G N + FF+ + L + AL+ A+ Q +L YQPQ+ TG++ G EA Sbjct: 704 SAKQSGRNRYGFFTADLQARTARALQIENALRRALERQQFELHYQPQVSLGTGQVVGAEA 763 Query: 578 LARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLS 637 L RWH P G V P+ FIP+AE G+I +G WV+ A R W + + A+SVNLS Sbjct: 764 LLRWHHPELGVVAPAEFIPVAENSGQIVALGEWVLHTAARDAKRWLDMQLPLRAVSVNLS 823 Query: 638 ALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVD 697 A+ FR QLP V+ + G+ +L +E+TE ++ + L D GV LS+D Sbjct: 824 AVQFRHPQLPEMVTRCLQQAGLPARRLELELTEGAAVDDPVAALAMMDQLHDRGVRLSMD 883 Query: 698 DFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVE 757 DFGTG+S LS L + ++KID+SFV + A++ AI + Q+L + AEGVE Sbjct: 884 DFGTGYSSLSCLKRFQIYKLKIDQSFVRDLDDDANDRAIVSAIIRMAQALGMQTTAEGVE 943 Query: 758 TKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 T Q + LR C QGY FSRPLPA+ ++ ++ Sbjct: 944 TDGQLQFLRAQGCDEGQGYLFSRPLPADAFEAYLRAMK 981 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 98/262 (37%), Gaps = 10/262 (3%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFF-NPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A ++ I+++ + AE L G E++IG N+ ++P Sbjct: 301 IQATQQQLRATIDAIPDPLFEIDQDGRYCSVHSQRAELLMG-PAEQLIGRNVTEVLPTLA 359 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALS--KVSAEGKVYYLALVR 123 + + + + G + R++ L+ D W + + +A K + L R Sbjct: 360 ALSVLDVLHEAQAQGWSVG----RQIMLDLPDLGPTWFELSAARKPQAAGAKPRIILLSR 415 Query: 124 DASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDT 183 D + +EQ + D +++ D IV+ NRAF+ + GY SEA G Sbjct: 416 DITERKRSQEQLQLTAQVFDQSSEAIVIADASHRIVRINRAFSRITGYQESEAVGQSVRL 475 Query: 184 LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVY--DVLAHLQNL 241 L P N + L + R + E + G S+S V D + + Sbjct: 476 LTMAEAGPDCNADAVYARLARQERWEGESWGRRKDGSGYPQWLSVSSVRDGDANGPITHS 535 Query: 242 VMTFSDITEERQIRQLEGNILA 263 + F DI+ +R+ ++ + Sbjct: 536 ITLFRDISLQREAQERIQRLAH 557 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 66/166 (39%), Gaps = 11/166 (6%) Query: 2 KLTDADNAADGIF--FPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDM 59 +T+ + + + +Q+ V+ + + ++ N A ++ GY+ E +G ++ + Sbjct: 416 DITERKRSQEQLQLTAQVFDQSSEAIVIADASHRIVRINRAFSRITGYQESEAVGQSVRL 475 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK---- 115 L + P AR E E +KDGS ++S V Sbjct: 476 LTMAEAGPDCNAD---AVYARLARQERWEGESWGRRKDGSGYPQWLSVSSVRDGDANGPI 532 Query: 116 VYYLALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIV 159 + + L RD S++ +E+ ++L + L V++ + + + Sbjct: 533 THSITLFRDISLQREAQERIQRLAHFDPLTDLPNRVLLAERTQRQI 578 >UniRef50_C6BWZ0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWZ0_DESAD Length = 716 Score = 793 bits (2049), Expect = 0.0, Method: Composition-based stats. Identities = 173/701 (24%), Positives = 302/701 (43%), Gaps = 53/701 (7%) Query: 138 LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIR 197 +++ D +D + + N + + FG + G+ ++ + + + Sbjct: 22 FKDFIENTDDLFTQVDTDGRFLYVNPSAQKYFGLPPEKCVGLSIFDFIHPED--KETTAQ 79 Query: 198 LQQLLWKTARDQDEFLLL--TRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIR 255 K ++ G ++ +I+ V D + DIT ++ Sbjct: 80 DFNKWQKDPSTNFSYINRQMHLNGSFYYMLWTITAVKDSEQKILWFNCIGRDITSHKETE 139 Query: 256 QLEGNILAAMC---------------------SSPPFHEMGEIICRNIESVLNESHVSLF 294 + + + I ++ + + S Sbjct: 140 EELRKAKDQLKITVDQQTEQLKLATAVFKHSSEGVTITDSNNNIRYINDAFTHITGYSEE 199 Query: 295 ALRNGMPIHWASSSH--------GAEIQNAQSWSATI--RQRDGAPAGILQ---IKTSSG 341 + P S+ H I+ W I R+++G T Sbjct: 200 EVIGQNPSILKSNRHKPSFYKGVWKSIKTNGMWEGEIWNRRKNGEVFPEWISIKAITDVK 259 Query: 342 AETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA 401 E +I DIS E + S++ I+ D +TGLPNR L + + + + Sbjct: 260 GEVVNYIAVFRDIS--------EAKASQRKIQHQAYHDALTGLPNRTLLIDRIRKAIASS 311 Query: 402 V----SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVL 457 + I +D+ +++ DSLGY D L + R RE + + RI G +FV+ Sbjct: 312 NDRKSCIALLFIDLDNFKNINDSLGYVIGDSVLQQAAARIREFIDEKDTVSRIGGDEFVI 371 Query: 458 VSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHN 514 + + D + +AD + N+ ++ + ++ F +T SIGI+ GK L+ A Sbjct: 372 MLKDLQDKHDAAVMADTIINLFAQALTVESHQFTITPSIGIALYPEDGKTPYSLVRNADT 431 Query: 515 AMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYG 574 AM+ ++ G N + F+P + E R+ + L++ S+N + YQP++ + G Sbjct: 432 AMNKAKQEGRNRYHLFTPGLTESALRRISMENQLRQTASDNGFTVYYQPKVNLHDNTIVG 491 Query: 575 IEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSV 634 +EAL RW P + P+ FIPLAEE G I IG V+ AC E + +SV Sbjct: 492 MEALIRWIQPDGTIISPAEFIPLAEETGLIVPIGEQVLEAACLDTVELNQRFGTNLKVSV 551 Query: 635 NLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGL 694 NLS F+ QL + D + I L +EITES +M+ + ++ + +G+ L Sbjct: 552 NLSLRQFKQEQLMKNIMDIIAMTAICPSCLELEITESTVMDDIEQTKTILEKMDKLGITL 611 Query: 695 SVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAE 754 S+DDFGTG+S LS L ++P+ +KID+SFV K L++AI S+ +S +L+ VAE Sbjct: 612 SIDDFGTGYSSLSHLKNMPMHTLKIDQSFVAGLPHNKSDQKLVKAIMSLARSFDLSTVAE 671 Query: 755 GVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 G+ET EQ+ +R++ C V+QGY++S P+P EE + + L Sbjct: 672 GIETPEQYNYMRELGCEVMQGYYYSPPVPLEEFAALIEASL 712 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 96/269 (35%), Gaps = 24/269 (8%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 F +E ++ + ++ NP+A+K +G E+ +G +I I + + + Sbjct: 22 FKDFIENTDDLFTQVDTDGRFLYVNPSAQKYFGLPPEKCVGLSIFDFIHPEDKETTAQDF 81 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA-EGKVYYL-ALVRDASVEMAQ 131 ++ ++R++ +GS + + ++ V E K+ + + RD + Sbjct: 82 NKWQKDPSTNFSYINRQM---HLNGSFYYMLWTITAVKDSEQKILWFNCIGRDITSHKET 138 Query: 132 KEQTR------------------QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCI 173 +E+ R H V + D +I N AFT + GY Sbjct: 139 EEELRKAKDQLKITVDQQTEQLKLATAVFKHSSEGVTITDSNNNIRYINDAFTHITGYSE 198 Query: 174 SEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYD 233 E G P +L + + + + E + GE SI + D Sbjct: 199 EEVIGQNPS-ILKSNRHKPSFYKGVWKSIKTNGMWEGEIWNRRKNGEVFPEWISIKAITD 257 Query: 234 VLAHLQNLVMTFSDITEERQIRQLEGNIL 262 V + N + F DI+E + ++ + Sbjct: 258 VKGEVVNYIAVFRDISEAKASQRKIQHQA 286 Score = 113 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 64/159 (40%), Gaps = 9/159 (5%) Query: 1 MKLT-DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDM 59 +K+T D + + + G + + N+ + + N A + GY EEVIG N + Sbjct: 149 LKITVDQQTEQLKLATAVFKHSSEGVTITDSNNNIRYINDAFTHITGYSEEEVIGQNPSI 208 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA--EGKVY 117 L +P+ + + + + E+ +K+G ++ ++ V Sbjct: 209 LKSNRHKPSFYKGVWKSIKT----NGMWEGEIWNRRKNGEVFPEWISIKAITDVKGEVVN 264 Query: 118 YLALVRDASVEMAQKE--QTRQLIIAVDHLDRPVIVLDP 154 Y+A+ RD S A + Q + A+ L +++D Sbjct: 265 YIAVFRDISEAKASQRKIQHQAYHDALTGLPNRTLLIDR 303 >UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCL1_NITMU Length = 1054 Score = 793 bits (2048), Expect = 0.0, Method: Composition-based stats. Identities = 175/720 (24%), Positives = 296/720 (41%), Gaps = 54/720 (7%) Query: 107 LSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFT 166 + + K LA+ + + ++ + LD E N+ Sbjct: 348 AAALGHVNKKLLLAMEEQQATTRELSNAKLRTERILESITDAFYTLDREWRFTYVNKEAE 407 Query: 167 EMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKA 226 + + G +R + L+ +EF + W + Sbjct: 408 NLLQRNREDLLGRVCWEEFKETAGTTFDREYHRALMENRTVTFEEFYVPL----DEWFEV 463 Query: 227 SISPVYDVLAHLQNLVMTFSDITEERQIRQ-------LEGNILAAMCSSPPFHEM----- 274 P + L + F DITE ++ Q + + + + Sbjct: 464 HAYP------SEEGLTVYFRDITERKESEQARQEAHVRIRQQASLLDKATDAIIVFGMDN 517 Query: 275 -GEIICRNIESVLNESHVSLFALRNGMP--IHWASSSHGAEIQNAQSWSATI--RQRDGA 329 E + E + + + M + ++ W + R+RD + Sbjct: 518 CIEFWNQGAERLYGWTSEEVMGREVEMLYDNVAVFDEANRALLSSGEWRGELAQRRRDQS 577 Query: 330 PAGI---LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPN 386 + + + E A DI+Q ++ + I L +D +TGLPN Sbjct: 578 MLNVEAHWTLVRNDDGEPQAIFAINTDITQ--------RKSAENEILHLALYDSLTGLPN 629 Query: 387 RNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLK 442 R L + L + + + I +D+ + + D+LG+ D L +V R ++ Sbjct: 630 RRLLLDRLGHALAVSARNQRMGALLFIDLDNFKLLNDTLGHDMGDLLLRQVAPRLSSCVR 689 Query: 443 PDQYLCRIEGTQFVLVS-------LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSI 495 + R+ G +FV++ + ++ I+ I + +R+ +P +D +T SI Sbjct: 690 ESDTVARLGGDEFVVILMGDFGEDHDEALTQISTICERIRSAFIQPFNLDPYIHHITPSI 749 Query: 496 GISYDL--GKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAIS 553 GI+ + + LL A AM + +G N +FF P M + R +L + L ++ Sbjct: 750 GIALFNDQSQTTNELLKRADLAMYQAKASGRNAMRFFDPDMQAAMNARAILESELYKSWE 809 Query: 554 NNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIA 613 N+ L YQ Q+ + + G EAL RW P G +PPS FIP AEE G I +G WV+ Sbjct: 810 RNEFILHYQLQVD--SRGIIGAEALVRWQHPRRGLLPPSEFIPQAEETGLILPLGEWVLE 867 Query: 614 EACRQLAEWRSQNIH-IPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESM 672 AC QLA W Q LSVN+S+L F QV + G + +L +E+TES+ Sbjct: 868 TACNQLASWALQPETVQLNLSVNVSSLQFCQPDFVEQVISILDRTGANPQRLKLELTESI 927 Query: 673 MMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKR 732 ++ + ++ L+ GVG ++DDFG G+S L L LP+ +KID+SFV LT+ Sbjct: 928 LVHDMDDTIAKMMTLKARGVGFALDDFGIGYSSLYYLKRLPLDWVKIDRSFVRDVLTDNN 987 Query: 733 ILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 ++ I + +S+ L V+AEGVET Q + L C QGY FSRPLP E+ ++ Sbjct: 988 DATIVRTILLLAKSMGLAVIAEGVETGAQKDFLASHGCTAYQGYLFSRPLPLEQFERFVQ 1047 Score = 139 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 77/265 (29%), Gaps = 24/265 (9%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGN-NIDMLIP 62 T + A LE ++ + N AE L RE+++G + Sbjct: 369 TRELSNAKLRTERILESITDAFYTLDREWRFTYVNKEAENLLQRNREDLLGRVCWEEFKE 428 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALV 122 EY R E E L W VY+ Sbjct: 429 TAGTTFDREYHRALMENRTVTFEEFYVPLDE--------WFEVHAYPSEEGLTVYF---- 476 Query: 123 RDASVEMAQKE-------QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 RD + ++ + RQ +D +IV + I N+ ++G+ E Sbjct: 477 RDITERKESEQARQEAHVRIRQQASLLDKATDAIIVFGMDNCIEFWNQGAERLYGWTSEE 536 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL 235 G + + L + L + + E R + ++A + V + Sbjct: 537 VMGREVEMLY----DNVAVFDEANRALLSSGEWRGELAQRRRDQSMLNVEAHWTLVRNDD 592 Query: 236 AHLQNLVMTFSDITEERQIRQLEGN 260 Q + +DIT+ + + Sbjct: 593 GEPQAIFAINTDITQRKSAENEILH 617 Score = 95.4 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 63/174 (36%), Gaps = 14/174 (8%) Query: 2 KLTDADNAADGIFF---PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNID 58 + A A L++ ++ ++ + F+N AE+L+G+ EEV+G ++ Sbjct: 484 ESEQARQEAHVRIRQQASLLDKATDAIIVFGMDNCIEFWNQGAERLYGWTSEEVMGREVE 543 Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRF--ALSKVSAEGKV 116 ML D E R G+ EL ++D S + L + Sbjct: 544 MLY--DNVAVFDEANRALLSSGE-----WRGELAQRRRDQSMLNVEAHWTLVRNDDGEPQ 596 Query: 117 YYLALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIVQCNRAFTEM 168 A+ D + + + + L + + L ++LD H + + M Sbjct: 597 AIFAINTDITQRKSAENEILHLALYDSLTGLPNRRLLLDRLGHALAVSARNQRM 650 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 792 bits (2047), Expect = 0.0, Method: Composition-based stats. Identities = 189/759 (24%), Positives = 336/759 (44%), Gaps = 65/759 (8%) Query: 94 EKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLD 153 + G AL + + A + +E + E+ L +D + PV D Sbjct: 136 RRPLGDIEMAETALHLFA----MRAAAELERIKIERQRDEELHFLQSLLDAIPNPVFYKD 191 Query: 154 PERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIR---LQQLLWKTARDQD 210 + + CNR++ ++ + G + ++ R L +T Sbjct: 192 LDSRYLGCNRSYEDLLRKSRQDIIGHRAADVMPPLRAVVAIREDNKVYDSALSRT----Y 247 Query: 211 EFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAA---MCS 267 E + + + + +P +D L LV T DI+ R+++ +++ + Sbjct: 248 ESTIEEPDHGTMQVLFNKAPFFDQDGELAGLVGTIQDISSLREMQSAMQSLVESTVGFTG 307 Query: 268 SPPFHEMGEIICRNIES-------------------------------VLNESHVS---- 292 S + + + +C+ ++ L+++ Sbjct: 308 SNCYRRVAQQLCQWFDADCAIVGRIQEEGKVLSLATIQDGVSMPSYSFNLSDTPCEKVVD 367 Query: 293 --LFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIER 350 + + G+ H+ + S ++ IR +G G+L + + ++ + Sbjct: 368 EGMCLMSEGVMEHYPNCSLVTQMHAEGYVGTPIRDHNGEVLGVLSVLSRGKIKSLERAKD 427 Query: 351 VADISQHMAALALEQEKSRQHIE-------QLIQFDPMTGLPNRNNLHNYLDDLVDKA-- 401 V I + +E+E S Q + L+ D +T LPNR + L + A Sbjct: 428 VLAIMAARVSAEIEREISEQRLRDNEDHLEYLVYHDVLTDLPNRQLFRDRLQHAISMASL 487 Query: 402 --VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVS 459 V I +DH + + DSLG+ D+ L EV R R + + R+ G +F ++ Sbjct: 488 GQHQVGVLFIDLDHFKKINDSLGHEVGDRLLCEVARRLRLCIGGLDTVARLSGDEFAIIL 547 Query: 460 LE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAM 516 + N++ N+ IA E+ +++ ++++ LT SIGIS GK+ LL A AM Sbjct: 548 DQLNNIENVILIAQEVNRRLAEMMVVEGYKLFLTASIGISLYPGDGKDVVSLLKCADAAM 607 Query: 517 DYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIE 576 ++ G + ++F++ +NE E L L AL++A+ N L + +QPQ+ + + G E Sbjct: 608 FKAKELGRDNYRFYTAGLNERASELLALEGALRQAVDKNHLVVYFQPQVELASRRIIGAE 667 Query: 577 ALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNL 636 AL RW P +G + P FIP+AEE G I +IG WV+ ++C Q +W+ +SVN+ Sbjct: 668 ALVRWQHPENGMISPVDFIPMAEETGLIVSIGEWVLRQSCLQARQWQVAGYPPMRISVNM 727 Query: 637 SALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSV 696 SA FR L V + G+ L +EITES++M +R+ L +G+ LS+ Sbjct: 728 SARQFRQKDLVPMVRRILQETGLSPEYLDLEITESILMNDVDGAVERLVELHSLGIQLSI 787 Query: 697 DDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGV 756 DDFGTG+S L+ L P+ +KID+SFV + + A+ A+ + +++NL V+AEG+ Sbjct: 788 DDFGTGYSSLAYLKKFPIQYLKIDRSFVRDVIIDPNDAAIATAVIDLARNMNLNVIAEGI 847 Query: 757 ETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 E ++Q + L C QGY FSRP+PA E + Sbjct: 848 EQQDQHQFLLDRGCGYGQGYLFSRPIPAHEFEQLLVRQQ 886 Score = 68.9 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 32/340 (9%), Positives = 95/340 (27%), Gaps = 31/340 (9%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 +K+ + L+ + + + N + E L R+++IG+ + Sbjct: 163 IKIERQRDEELHFLQSLLDAIPNPVFYKDLDSRYLGCNRSYEDLLRKSRQDIIGHRAADV 222 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYY 118 +P + +R + E +E+ D + F + + Sbjct: 223 MPPLRAVVAIREDNKVYDSALSR----TYESTIEEPDHGTMQVLFNKAPFFDQDGELAGL 278 Query: 119 LALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMF-------GY 171 + ++D S R++ A+ L + + + + F G Sbjct: 279 VGTIQDIS-------SLREMQSAMQSLVESTVGFTGSNCYRRVAQQLCQWFDADCAIVGR 331 Query: 172 CISEASGMQPDTLLNIPEFPADNRIRLQQ----LLWKTARDQDEFLLLT-RTGEKIWIK- 225 E + T+ + P+ + ++ + E ++ + Sbjct: 332 IQEEGKVLSLATIQDGVSMPSYSFNLSDTPCEKVVDEGMCLMSEGVMEHYPNCSLVTQMH 391 Query: 226 ---ASISPVYDVLAHLQNLVMTFSD--ITEERQIRQLEGNILAAMCSSPPFHEMGEIICR 280 +P+ D + ++ S I + + + + A + + + + Sbjct: 392 AEGYVGTPIRDHNGEVLGVLSVLSRGKIKSLERAKDVLAIMAARVSAEIEREISEQRLRD 451 Query: 281 NIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWS 320 N + + + + + H + + Sbjct: 452 NEDHLEYLVYHDVLTDLPNRQLFRDRLQHAISMASLGQHQ 491 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 791 bits (2045), Expect = 0.0, Method: Composition-based stats. Identities = 185/707 (26%), Positives = 323/707 (45%), Gaps = 34/707 (4%) Query: 116 VYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 L ++R A ++ L ++ + P+ ++D + +I+ N ++FG Sbjct: 364 TLTLMIMRYKKTLQALRQSEGTLKAMLESIADPIHMVDRDLNILWANDIAKQLFGKN--- 420 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASI-SPVYDV 234 G + L+ P D + E L E+ + D Sbjct: 421 LVGQKCYAALHRSPTPCDPMCHAIKAFSDGHAHSSENLFFDINDEERCFLVTANVASTDS 480 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICR------NIESVLNE 288 ++ D+TE ++ +Q ++ +S M ++ R + Sbjct: 481 QGQPSAVLTISRDVTEIKKTQQQFHQAKWSIDASLTPMLMADLQGRLTYANQAALDLWGY 540 Query: 289 SHVS-LFA--LRNGMPIHWASSSHGAEIQNAQSWSATIR--QRDGAPAGIL---QIKTSS 340 + + + + ++ W R Q++G + Q+ Sbjct: 541 AGEEEVLGKNIVEFQEDPQRTRIIMEILKARGVWRGEGRGKQKNGNGFDVELQAQVVKDQ 600 Query: 341 GAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDK 400 + + DI+ ++ K+ I++L FD +TGLPNR L ++++ + + Sbjct: 601 NGGPLSILASAIDIT--------DKRKTELQIKKLAYFDSLTGLPNRTLLKDHMELALGQ 652 Query: 401 AVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFV 456 A V L+ +D+ + + D+LG+A D + V R R + + L R G +FV Sbjct: 653 ARRLNKFVAVLLLDLDNFKHINDTLGHATGDLLIRSVAERLRTECRTCDTLARWGGDEFV 712 Query: 457 LVSLEND-VSNITQIADELRNVVSK-PIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTA 512 L+ + D + N T ++ ++++ P + T SIGI+ G++ + LL A Sbjct: 713 LLLTDLDDIQNTTSATEKFMALLTERPFATSECDINTTASIGIALYPQDGQDPETLLKRA 772 Query: 513 HNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGEL 572 AM +KNG NG+ FFS + E + R + L+ A+ +++LVYQPQI + Sbjct: 773 DTAMYEAKKNGRNGYHFFSLQLAEQAERRHRMEINLRSALKEGEMQLVYQPQIDLGKVRI 832 Query: 573 YGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPAL 632 G+EAL RW P G + P+RFIPLAEE G I +G WV+ +ACRQ A W+ + Sbjct: 833 TGMEALLRWQSPEEGTISPARFIPLAEETGLIYPLGEWVLQQACRQGAIWQKTEASPLCV 892 Query: 633 SVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGV 692 +VNLSA F L + + G+ H L +EITES+ +E+ + + L+ +GV Sbjct: 893 AVNLSAKQFHQPDLAKNIKKILRETGLSPHLLELEITESVFLENMEAAIEALTELKKLGV 952 Query: 693 GLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVV 752 S+DDFGTG+S LS L LP+ IKI + FV T+ A+++A ++ +SL + ++ Sbjct: 953 QFSIDDFGTGYSSLSYLKKLPIDRIKIAQEFVRDIDTDDGDKAIIKATIAMAKSLGMKLI 1012 Query: 753 AEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI 799 AEGVE +Q L C +QGY+F++P+PA+E+P ++ S K+ Sbjct: 1013 AEGVENHQQLAFLLLHGCHAMQGYYFAKPMPAQEVPSFIHSETCFKL 1059 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 97/262 (37%), Gaps = 12/262 (4%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 K A ++G LE +++ + +++ N A++L+G + ++G + Sbjct: 374 KTLQALRQSEGTLKAMLESIADPIHMVDRDLNILWANDIAKQLFG---KNLVGQKCYAAL 430 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIW-TRFALSKVSAEGKV-YYL 119 R P P + H + S L + D + + ++ ++G+ L Sbjct: 431 HRSPTPCDP--MCHAIKAFSDGHAHSSENLFFDINDEERCFLVTANVASTDSQGQPSAVL 488 Query: 120 ALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYC-ISEASG 178 + RD + ++Q Q ++D P+++ D + + N+A +++GY E G Sbjct: 489 TISRDVTEIKKTQQQFHQAKWSIDASLTPMLMADLQGRLTYANQAALDLWGYAGEEEVLG 548 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 + + ++L + E + G ++ V D Sbjct: 549 KNIVEF----QEDPQRTRIIMEILKARGVWRGEGRGKQKNGNGFDVELQAQVVKDQNGGP 604 Query: 239 QNLVMTFSDITEERQIRQLEGN 260 +++ + DIT++R+ Sbjct: 605 LSILASAIDITDKRKTELQIKK 626 >UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTY3_DESBD Length = 1075 Score = 791 bits (2044), Expect = 0.0, Method: Composition-based stats. Identities = 177/707 (25%), Positives = 310/707 (43%), Gaps = 38/707 (5%) Query: 121 LVRDASVEMAQ-KEQTRQLIIAVDHLDRPVIVLDPERH-IVQCNRAFTEMFGYCISEASG 178 L R A R + V + + ++ NR F+++ GY +E Sbjct: 379 LSRQVQERTAALSASERSFRAFFEMASVGVAQFEGDTRRFIKVNRKFSDLMGYSAAELGT 438 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 + P L++ ++ A + + E + + G W A+ISP++D H Sbjct: 439 LSPRDLVHPDDWQASEEAMKSLVTKEQKEITLEKRYVRKGGGVFWGLATISPLWDQGEHP 498 Query: 239 QNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMG------EIICRNIESVLNESHVS 292 ++ + DIT ++ + ++ + E + + S Sbjct: 499 ESYLAVVRDITVAKKAEEKLLLAAKVFENTVEGIVVTNTEGTIEQVNPGFTVITGYSADE 558 Query: 293 LFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGIL---QIKTSSGA 342 L++ ++ W+ I R++DG + Sbjct: 559 AVGSNPRILKSDRHAQHFYQEMWTKLTQDGHWAGEIWNRRKDGESYPEWLTISAVKNEAG 618 Query: 343 ETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV 402 +T+ ++ DI+ E ++ + +E Q D +TG+PNR L + L + + Sbjct: 619 QTTNYVSIFHDIT--------ELKRQQDALEYQAQHDALTGMPNRILLGDRLRMALAQLA 670 Query: 403 S----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV 458 + +D+ + + D LG+ D+ L+++ R L+ L R+ G +F+++ Sbjct: 671 RSGGKLALLFFDLDNFKTINDGLGHGVGDELLVDLSRRLERLLRSGDTLARLGGDEFLIL 730 Query: 459 SLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIG--ISYDLGKNRDYLLSTAHNA 515 E V + IA + + + P D + +T SIG I+ D G L+ A A Sbjct: 731 LPEIESVDAASHIATRMLDALKAPFHHGDVEYFVTASIGLTIAPDDGNEAPKLIKNADMA 790 Query: 516 MDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGI 575 M + G N +Q+F+P M+ R+ + L++AI + +L YQP + ++G + G Sbjct: 791 MYRAKSMGRNNYQYFTPEMDVAAHRRISMEYKLRKAIEAQEFELFYQPLVHIQSGHILGA 850 Query: 576 EALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVN 635 EAL RW + P+ FIPLAEE I +G WV+ A Q W+ H +SVN Sbjct: 851 EALIRWRC-EGKLISPAEFIPLAEESALILPLGDWVLRTAAHQAKLWQDAG-HDLTMSVN 908 Query: 636 LSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLS 695 +S+ F L + + + + +L EITESM+M ++ + LR+ G Sbjct: 909 ISSRQFSGADLAVTLREVLLDTELRPGRLYFEITESMLMGDVSKAETTLLNLREAGGTFF 968 Query: 696 VDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEG 755 +DDFGTG+S LS L LP+ +KID+SF+ + A++ AI S+ ++LNL +VAEG Sbjct: 969 LDDFGTGYSSLSYLKRLPIDGLKIDRSFIKDITDDSDSRAIVAAIVSMARTLNLRIVAEG 1028 Query: 756 VETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS---VLPLKI 799 VET+ Q +L + V+QGY SRP+PA++ +S + PL I Sbjct: 1029 VETQAQRGLLASMGPIVLQGYLASRPVPAQDFEALLSRDALLPPLVI 1075 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 57/266 (21%), Positives = 97/266 (36%), Gaps = 7/266 (2%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINEN-DEVMFFNPAAEKLWGYKREEVIGNNIDML 60 + T A +A++ F E +G + + N L GY E+ + L Sbjct: 385 ERTAALSASERSFRAFFEMASVGVAQFEGDTRRFIKVNRKFSDLMGYSAAELGTLSPRDL 444 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYY 118 + D A E ++ + ++ E + +K G W +S + +G+ Y Sbjct: 445 VHPDDWQASEEAMKSLV---TKEQKEITLEKRYVRKGGGVFWGLATISPLWDQGEHPESY 501 Query: 119 LALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 LA+VRD +V +E+ ++ ++V + E I Q N FT + GY EA G Sbjct: 502 LAVVRDITVAKKAEEKLLLAAKVFENTVEGIVVTNTEGTIEQVNPGFTVITGYSADEAVG 561 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 P +L + L + E + GE +IS V + Sbjct: 562 SNP-RILKSDRHAQHFYQEMWTKLTQDGHWAGEIWNRRKDGESYPEWLTISAVKNEAGQT 620 Query: 239 QNLVMTFSDITEERQIRQLEGNILAA 264 N V F DITE ++ + Sbjct: 621 TNYVSIFHDITELKRQQDALEYQAQH 646 >UniRef50_Q2BPB1 Regulatory component of sensory transduction system n=2 Tax=Gammaproteobacteria RepID=Q2BPB1_9GAMM Length = 885 Score = 790 bits (2042), Expect = 0.0, Method: Composition-based stats. Identities = 181/717 (25%), Positives = 322/717 (44%), Gaps = 43/717 (5%) Query: 114 GKVYYLALVRDASVEMAQKEQTR-----------QLIIAVDHLDRPVIVLDPERHIVQCN 162 G + ++ + + L +D L + + D E + CN Sbjct: 177 GTMLLGMILSRQEERRLAERELHISRQILNRERGLLRGLIDALPDHIFIKDKEGKYLGCN 236 Query: 163 RAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKI 222 +AF G+ ++ G + ++ Q++ E + G I Sbjct: 237 KAFQSFTGHQEADLIGKTDQD-FSESNHAITDKSDTLQVINNLLPINREAWTHEQDGSPI 295 Query: 223 WIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMG------E 276 +++ ++P D+ Q +V DITE+R+ + + A+ SP + E Sbjct: 296 LLESQLAPFLDMDGEPQGIVGISRDITEKRKAEERILTLSQAVEQSPVSVVITNLKGEVE 355 Query: 277 IICRNIESVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGA 329 + ESV S + L++G + A++ +SW ++++G Sbjct: 356 YVNSTFESVTGYSQAEVLGKDSSILKSGKTPPGRYADMWAKLVQGESWQGEFQNKKKNGE 415 Query: 330 PAGI---LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPN 386 + + E F+ D+++ Q+ + I FD +T LPN Sbjct: 416 IFWEQAHIAPVLDAEGEVRHFLAVKQDVTK--------QKAQEEKILHQAHFDGLTELPN 467 Query: 387 RNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLK 442 R + L+ ++ +A V + +D + V D+LG+ D+ L+E R + ++ Sbjct: 468 RFLAMHRLETMMHEAKRNQHQIAVLFLDMDDFKKVNDTLGHDMGDKILVEAAKRLQGSVR 527 Query: 443 PDQYLCRIEGTQFVLVSLEND-VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD- 500 + R+ G +F+++ + IA L + ID + LT+SIGI+ Sbjct: 528 DSDTIGRLGGDEFIVLINHLERPEQALPIAQNLLQQFRSSLTIDGRDILLTMSIGIALYP 587 Query: 501 -LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKL 559 G LL A +AM + + G N + F++ MN RL L L A+ N+L+L Sbjct: 588 GDGTTPSELLRNADSAMYHSKAAGRNSFHFYTQEMNIEANRRLQLEEQLHNALDRNELRL 647 Query: 560 VYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQL 619 +YQP + +T ++ G EAL RW G + P FIP+AE G I IG++V+ +A R Sbjct: 648 LYQPVVDLKTRKIVGAEALLRWDSKELGAISPEEFIPVAEHTGLIVEIGKFVLDDALRTT 707 Query: 620 AEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTE 679 + W I +++NLS FR L + + ++++G++G L +EITE ++M + Sbjct: 708 SRWIKTFIPDFHIAINLSPRQFRDPHLIDNIESFVNSYGLEGRNLELEITEGVLMSQHAD 767 Query: 680 IFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEA 739 + + I L G+ +S+DDFGTG+S LS L S P +K+D+SF++ + L L+ A Sbjct: 768 VEEAIAKLTQKGISISMDDFGTGYSSLSYLRSYPFNILKVDRSFINDISVDAADLELVNA 827 Query: 740 ITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLP 796 + L L V+AEGVET+EQ +L + +C + QGY+FS+P+PA+E+ + Sbjct: 828 SIDMAHGLGLKVIAEGVETEEQTALLLRKNCDMAQGYYFSKPIPADELEEILKKQTS 884 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 97/259 (37%), Gaps = 7/259 (2%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 N G+ ++ + ++ + + N A + G++ ++IG Sbjct: 205 LNRERGLLRGLIDALPDHIFIKDKEGKYLGCNKAFQSFTGHQEADLIGKTDQDF----SE 260 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYYLALVRD 124 H + + + ++RE ++DGS I L+ + + RD Sbjct: 261 SNHAITDKSDTLQVINNLLPINREAWTHEQDGSPILLESQLAPFLDMDGEPQGIVGISRD 320 Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 + + +E+ L AV+ V++ + + + N F + GY +E G ++ Sbjct: 321 ITEKRKAEERILTLSQAVEQSPVSVVITNLKGEVEYVNSTFESVTGYSQAEVLGK-DSSI 379 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 L + P + L + Q EF + GE W +A I+PV D +++ + Sbjct: 380 LKSGKTPPGRYADMWAKLVQGESWQGEFQNKKKNGEIFWEQAHIAPVLDAEGEVRHFLAV 439 Query: 245 FSDITEERQIRQLEGNILA 263 D+T+++ + + Sbjct: 440 KQDVTKQKAQEEKILHQAH 458 >UniRef50_Q13IZ7 Putative diguanylate cyclase(GGDEF)/ phosphodiesterase(EAL) with PAS/PAC and GAF sensors n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13IZ7_BURXL Length = 847 Score = 790 bits (2042), Expect = 0.0, Method: Composition-based stats. Identities = 256/839 (30%), Positives = 397/839 (47%), Gaps = 65/839 (7%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 L Q VL++E+ + FFNPAAE LWG V+G + ML+PR ++PA Sbjct: 10 LVQVLAQIPDAVVLVDEDGAIGFFNPAAEALWGLTAAAVLGADAGMLLPRGIQPA----- 64 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKE 133 H + G G++ LQ+E+ DG + ++ G+ + A +RD + + Q E Sbjct: 65 GHGVQTGNVDGPGLA--LQIERNDGVMRRGQMSIHGFEVAGRRFRAAFIRDITDQHRQCE 122 Query: 134 QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPAD 193 + +QL+ V+ D +IV + I N T M GY +E G++ Sbjct: 123 EWQQLLRVVNGSDNAIIVASLDGSISFINSGVTRMLGYAAAEVQGLRLVEPFAGVHTNMA 182 Query: 194 NRIRLQQLLWKTA----RDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 R+Q + + + + L+ T+ G +W+ I+ + D NL+ +DIT Sbjct: 183 AVERIQSAAREPSTPDHPFRQDLLVYTKGGRPLWVNVGITVITDNAGAPVNLLAVLTDIT 242 Query: 250 EERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMP-------- 301 R +L+ +L AM P E+ I+CR +E + E + + +G Sbjct: 243 LTRMREELQQKVLDAMARELPATEVAGILCREVERIAPEVVATFLRVDDGRLFTLAAPRL 302 Query: 302 ------------IHWASSSHGAEIQNA---------------------------QSWSAT 322 I + S G WS Sbjct: 303 PVTVTRAMDGESIGPCAGSCGTAAWRGTPVVVTDIASDPLWTGYRDLVLPLGLAACWSYP 362 Query: 323 IRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMT 382 ++ DG+ G AF + + D+ + AL LE+EK+R I QL D +T Sbjct: 363 VKGADGSVLGTFAFYYRENHGPVAFHQSLVDMGLSLCALLLEREKARMRIHQLAFHDTLT 422 Query: 383 GLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFR 438 GLPNRN L++ A + I +DH + V D+ G+A D+ L E RF+ Sbjct: 423 GLPNRNMFETQAQQLLNDARRTERELALVFIDLDHFKRVNDTRGHATGDEVLCETGRRFK 482 Query: 439 EKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGIS 498 L+ L R+ G +FV + V T I + L + P+++ P + SIGI+ Sbjct: 483 SVLRDGDLLGRLAGDEFVAILPHCGVHQATGIVERLLAATAPPVVVAGAPIHASASIGIA 542 Query: 499 YD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQ 556 G++ LL A AM + + G + FF M+ ++E+ +L A L+ A+ ++ Sbjct: 543 MYPADGEHVPTLLRQADIAMYHAKARGRGHFCFFREEMSRNIQEQAMLEADLRVALKHDL 602 Query: 557 LKLVYQPQIFAETGELY-GIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEA 615 L L YQPQ A G + G+EAL RW+ G VPP RF+ LAEE G I +G+WV A Sbjct: 603 LDLWYQPQFDAANGHVLSGVEALLRWNHATLGSVPPVRFVVLAEECGLIGELGKWVTQRA 662 Query: 616 CRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMME 675 CRQLA+WR++ + IP +S+NLSA FR + L +V+ + A G+ H LT+E+TES+M+ Sbjct: 663 CRQLADWRARGVEIPRVSINLSASDFRDSTLAERVARTLLAHGLQPHDLTLEMTESVMLG 722 Query: 676 HDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILA 735 + + I L +G+ LS+DDFGTG+S L L LP+ E+K+D+SFV A Sbjct: 723 DEPGVLSMIDELHRLGIQLSLDDFGTGYSSLGYLHRLPLDELKLDRSFVRDLDHSDSARA 782 Query: 736 LLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 L + IG+SLN+ VVAEGVET Q + L + C V+QGY +RP+ + W+ + Sbjct: 783 LTSTVLRIGESLNIKVVAEGVETDTQRQFLVEHGCPVLQGYLLARPMAPHLLEEWLRAA 841 Score = 82.3 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 84/259 (32%), Gaps = 29/259 (11%) Query: 130 AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE 189 AQ + L+ + + V+++D + I N A ++G + G LL Sbjct: 2 AQAQIAGTLVQVLAQIPDAVVLVDEDGAIGFFNPAAEALWGLTAAAVLGADAGMLLPRGI 61 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 PA + ++ + Q E G + SI +A + DIT Sbjct: 62 QPAGHGVQTGNVDGPGLALQIE----RNDGVMRRGQMSIHGF--EVAGRRFRAAFIRDIT 115 Query: 250 EE-RQIRQLEGNILAAMCSSPPFHEMG-----EIICRNIESVLNESHVSLFALRNGMPIH 303 ++ RQ + + + S I + +L + + LR P Sbjct: 116 DQHRQCEEWQQLLRVVNGSDNAIIVASLDGSISFINSGVTRMLGYAAAEVQGLRLVEPFA 175 Query: 304 WASSSHGAEIQNAQSWSAT-------------IRQRDGAPAGI---LQIKTSSGAETSAF 347 ++ A ++ QS + + + G P + + + T + Sbjct: 176 GVHTNM-AAVERIQSAAREPSTPDHPFRQDLLVYTKGGRPLWVNVGITVITDNAGAPVNL 234 Query: 348 IERVADISQHMAALALEQE 366 + + DI+ L+Q+ Sbjct: 235 LAVLTDITLTRMREELQQK 253 Score = 68.1 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 53/146 (36%), Gaps = 5/146 (3%) Query: 2 KLTDADNAAD--GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDM 59 +TD + + + ++ + + + F N ++ GY EV G + Sbjct: 113 DITDQHRQCEEWQQLLRVVNGSDNAIIVASLDGSISFINSGVTRMLGYAAAEVQGLRLVE 172 Query: 60 LIPRDLRPAHP-EYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA--EGKV 116 E I+ ++L + K G +W ++ ++ V Sbjct: 173 PFAGVHTNMAAVERIQSAAREPSTPDHPFRQDLLVYTKGGRPLWVNVGITVITDNAGAPV 232 Query: 117 YYLALVRDASVEMAQKEQTRQLIIAV 142 LA++ D ++ ++E ++++ A+ Sbjct: 233 NLLAVLTDITLTRMREELQQKVLDAM 258 >UniRef50_B8G9I9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Chloroflexus RepID=B8G9I9_CHLAD Length = 1101 Score = 789 bits (2040), Expect = 0.0, Method: Composition-based stats. Identities = 221/847 (26%), Positives = 362/847 (42%), Gaps = 69/847 (8%) Query: 2 KLTDADNAADGI-FFP-ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDM 59 +TD A + L Q ++ + + +++ N A L+ + E +IG + Sbjct: 256 DVTDRVEAERQLNLRARVLSQINEAVIVTDRSGAIIYLNEMAAYLYAVQPEAIIGQPLSR 315 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--Y 117 L + P P + ++ G EL DG + + + + Sbjct: 316 LFTAEPLPYQP-----VQPSVQSFSTGWRGELIHRLPDGRAMMVEVRIDPLYHDELANGG 370 Query: 118 YLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERH------IVQCNRAFTEMFGY 171 L +VRD + +E+ R L V H + VI+LD E I N A +++ GY Sbjct: 371 ALIVVRDITARKQAEERLRLLESVVVHTNDAVIILDAEPLHAPGPFIRYANAACSQLTGY 430 Query: 172 CISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV 231 +E G +L+ P + RL + + + + L TR G+ IW+ S+SPV Sbjct: 431 ATNELIGRSL-RILHGPATDSVTLNRLWEAMERQQPARFALLYYTRAGKPIWVDLSLSPV 489 Query: 232 YDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESH- 290 D + + DI+ ++ LE + A + + ++ R + + + Sbjct: 490 TDEYGKATHFIALHRDISAQKLAAFLEHDRSAILALLLQHAPVTAMLNRLVTLIERQRPN 549 Query: 291 ---------------------VSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGA 329 L R I + + W +R + Sbjct: 550 WLVWAELDGHPAAASKPLAGEADLIGPRLRQMIARHNQKAPIVLDLHTHWD-QLRHLSVS 608 Query: 330 PAGILQIKTSSGAETSAFIERVADISQHMAA--LALEQEKSR------------QHIEQL 375 I + + GA + + ++ L + + + Sbjct: 609 SGWIWPLAKAHGA-----LAIFHQQTDWVSESDQMLLRVATELFNLIADHANLNAQLNYQ 663 Query: 376 IQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALL 431 +++D +TGLPNRN L +D + A + I +D + V DSLG+ D+ L Sbjct: 664 VRYDTLTGLPNRNLLQERIDLALRDARERRHIVALLFIDLDGFKQVNDSLGHPIGDRFLK 723 Query: 432 EVVNRFREKLKPDQYLCRIEGTQFVLVSLEN-DVSNITQIADELRNVVSKPIMIDDKPFP 490 V F +P L R+ G +F+L+ + D A L + + P + D Sbjct: 724 HVSQAFAACARPQDTLGRMGGDEFLLLMPDLPDARLADIAAQRLLDALQTPFLHDGHELR 783 Query: 491 LTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAAL 548 LT SIGIS G + LL A +AM ++ +G+ + P + RL L A L Sbjct: 784 LTASIGISLFPRDGVDVVTLLKNADSAMHRAKELKRSGFLHYRPEHSRRAHTRLALEAQL 843 Query: 549 KEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIG 608 + A+ ++L + YQPQ + + G+EAL RWH P G + P F+P+AEE I IG Sbjct: 844 RRALERHELAVYYQPQYDLVSEGITGVEALVRWHHPQRGPIAPGEFVPIAEESDLIIEIG 903 Query: 609 RWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEI 668 WV+ EACRQ W+ + +SVN+SA + +V+ +HA G+ L +EI Sbjct: 904 SWVLREACRQAMAWQQAGYPLLRISVNVSARQLLRPEFVAEVAAVLHATGLPAQYLELEI 963 Query: 669 TESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCL 728 TE +M++ ++I LR MGV +++DDFGTG+S L+ L L + +KID++FV Sbjct: 964 TEGVMLDDPIYAARQIDQLRHMGVRIALDDFGTGYSSLAYLRQLRLDALKIDQAFVRAID 1023 Query: 729 TEK----RILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPA 784 ++ ALL AI ++ SL L VVAEGVET EQ L + C V+QGY S+PLPA Sbjct: 1024 EQQNVVTNSRALLRAIINLAHSLGLAVVAEGVETDEQRAALLSMGCDVLQGYLISQPLPA 1083 Query: 785 EEIPGWM 791 +E+ + Sbjct: 1084 DEVWPML 1090 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 58/413 (14%), Positives = 122/413 (29%), Gaps = 32/413 (7%) Query: 6 ADNAADGIFFPALEQNMMGAVLIN-ENDEVMFFNPAAEKLWGYK-REEVIGNNIDMLIPR 63 A + + LE + ++ + + NPA +++G E + + + Sbjct: 140 ALRNNEFRYRQLLELAPLLIIISTLPEGIIRYCNPAGARIFGVDDPAEPVNQPLTEFLSG 199 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVR 123 + + + R G + + +D + + G++ L + Sbjct: 200 EDHDLMRKRRQALRNGQLLQ----PARYHIYARDQIVRVIEVQGTLIEGPGEIQVLTIGY 255 Query: 124 DASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDT 183 D + + + Q + ++ VIV D I+ N ++ G Sbjct: 256 DVTDRVEAERQLNLRARVLSQINEAVIVTDRSGAIIYLNEMAAYLYAVQPEAIIGQPLSR 315 Query: 184 LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVM 243 L P Q + E + G + ++ I P+Y ++ Sbjct: 316 LFTAEPLPYQPVQPSVQSFSTG--WRGELIHRLPDGRAMMVEVRIDPLYHDELANGGALI 373 Query: 244 TFSDITEERQIRQLEGNILAAMCSSPPFHEMGEII------------CRNIESVLNESHV 291 DIT +Q + + + + + + + + + Sbjct: 374 VVRDITARKQAEERLRLLESVVVHTNDAVIILDAEPLHAPGPFIRYANAACSQLTGYATN 433 Query: 292 SLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATIR--QRDGAPAGI---LQIKTSSG 341 L L + ++ Q + R G P + L T Sbjct: 434 ELIGRSLRILHGPATDSVTLNRLWEAMERQQPARFALLYYTRAGKPIWVDLSLSPVTDEY 493 Query: 342 AETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNN-LHNY 393 + + FI DIS A LE ++S + L+Q P+T + NR L Sbjct: 494 GKATHFIALHRDISAQKLAAFLEHDRS-AILALLLQHAPVTAMLNRLVTLIER 545 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 50/388 (12%), Positives = 116/388 (29%), Gaps = 44/388 (11%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 LE + +++ + + F +PA L G+ + V+ ++ + D H Sbjct: 22 LNTLLECIVEIVIILAPDQTIRFASPALTNLLGHPQALVVNRSLYDFVHVDD---HDRLQ 78 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALV-RDASVEMAQK 132 RH + ++ ++L+ +G + +V + L D + +A Sbjct: 79 RHLAQLADSQCRRQPIRVRLQHAEGGWYIFELRCCNRQHQPEVGGIILSGYDVTALLAAD 138 Query: 133 EQTR----QLIIAVDHLDRPVIVLD-PERHIVQCNRAFTEMFGY-CISEASGMQPDTLLN 186 R + ++ +I+ PE I CN A +FG +E L+ Sbjct: 139 YALRNNEFRYRQLLELAPLLIIISTLPEGIIRYCNPAGARIFGVDDPAEPVNQPLTEFLS 198 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 + R R Q L + + R I+ + + ++ Sbjct: 199 GEDHDLM-RKRRQALRNGQLLQPARYHIYARDQIVRVIEVQGTLIEGP--GEIQVLTIGY 255 Query: 247 DITEERQIRQLEGNILAAMCSSPPFHEMGEIICRN--------------IESVLNESHVS 292 D+T+ + + + + + E+++ + Sbjct: 256 DVTDRVEAERQLNLRARVLSQINEAVIVTDRSGAIIYLNEMAAYLYAVQPEAIIGQPLSR 315 Query: 293 LFALRNGMPIHWASSSHGAEIQNAQSWSATIRQR--DGAPAGILQIKTS---SGAETSAF 347 LF P+ + + + W + R DG + Sbjct: 316 LF---TAEPLPYQPVQPSVQSFSTG-WRGELIHRLPDGRAMMVEVRIDPLYHDELANGGA 371 Query: 348 IERVADISQHMAALALEQEKSRQHIEQL 375 + V DI+ ++++ + + L Sbjct: 372 LIVVRDITA--------RKQAEERLRLL 391 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 789 bits (2039), Expect = 0.0, Method: Composition-based stats. Identities = 187/708 (26%), Positives = 305/708 (43%), Gaps = 36/708 (5%) Query: 122 VRDASVEMAQKEQT-RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 R ++ A + Q H + D I+ N AF M GY E M Sbjct: 83 SRRSTQRNANHDSRPEQFYAFFQHGGAGMYSYDTAGRILNANPAFCSMIGYSEHELKSMT 142 Query: 181 PDTLLNIPEFPADNRIRLQQLLWK-TARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 + P+ + RL + K E L + G + + + Sbjct: 143 ILDV-TPPQVRDETLNRLARFRDKLNEPCNFEKTYLCKDGSTLIGHFTGKWIV-SDNDSI 200 Query: 240 NLVMTFSDITEERQIRQLEGNILAAMCSSPPFH-EMGEIICRNIESVLNESHVSLFALRN 298 V DITE + Q + + + I + +L + Sbjct: 201 YAVALVQDITEHKNADQAVLKEREFLQTVIDGIADPIMAISTDYHVILANRAARESHPEH 260 Query: 299 GMPIHWA---SSSHGAE--------------IQNAQSWSATIR--QRDGAPAGILQIK-- 337 + SHG++ + + I R G +IK Sbjct: 261 ALQPGPTLCYQLSHGSDTPCSDTNQKCPLCQVLKTGKEAREIHEHLRAGHEKRTYEIKAS 320 Query: 338 --TSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLD 395 + IE D++ + + A E + QH++ + D +T LPN+ + L+ Sbjct: 321 PLYNEDHSIRGIIETSRDLTDILNSEA-ELNEKTQHLQFVTTHDQLTHLPNKELFFDRLE 379 Query: 396 DLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIE 451 K + I +D + + DSLG+ DQ L EV R ++ L R+ Sbjct: 380 RATFKTHRSPFFTALLFIDLDRFKHINDSLGHEIGDQLLQEVAKRLSTSIRKTDTLARMG 439 Query: 452 GTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYL 508 G +F+++ + ++S+++ +A + + ID +T S+GIS ++ L Sbjct: 440 GDEFLIIIEDIKELSHVSTVAKNFIDTILPSFTIDGHELFITPSMGISIAPTDTQHPKEL 499 Query: 509 LSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAE 568 L+ A AM + GGN QF++ MN K R+ L + L++A++ +Q L YQPQ + Sbjct: 500 LAFAEIAMYQAKGLGGNKCQFYTAEMNSRAKTRIELESYLRKAVNQDQFVLYYQPQFDIQ 559 Query: 569 TGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIH 628 +GEL G EAL RW P G + P+ FIPLAEE G I IG WV+ EAC Q +W+ Sbjct: 560 SGELVGCEALLRWQHPQMGMISPNDFIPLAEETGVIIEIGEWVLQEACLQNKKWQDAGHS 619 Query: 629 IPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILR 688 ++VN+S FR + + GI L +EITES++M+ ++ L+ Sbjct: 620 PIRVAVNISPRQFREPGFLEMIERVVQTTGIKPEWLELEITESLLMDDIDSAINILKQLK 679 Query: 689 DMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLN 748 G+ L++DDFGTG+S LS L P++ +KID+SFV T+ ++ +A+ ++ S+N Sbjct: 680 AKGIHLAIDDFGTGYSSLSYLKRFPLSRLKIDRSFVRDITTDDNDASITKAVIALAHSMN 739 Query: 749 LTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLP 796 L VVAEG+ET+EQ L++ C V QGY +S P+ E + + P Sbjct: 740 LKVVAEGIETQEQLLFLKEKGCEVGQGYLYSPPVAKEPFDHFFTDGSP 787 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 97/279 (34%), Gaps = 15/279 (5%) Query: 12 GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPE 71 F+ + G + ++ NPA + GY E+ I + P +R Sbjct: 98 EQFYAFFQHGGAGMYSYDTAGRILNANPAFCSMIGYSEHELKSMTILDVTPPQVRDETLN 157 Query: 72 YIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALS-KVSAEGKVYYLALVRDASVEMA 130 + R+ E + E KDGS + F VS +Y +ALV+D + Sbjct: 158 RLARFRD---KLNEPCNFEKTYLCKDGSTLIGHFTGKWIVSDNDSIYAVALVQDITEHKN 214 Query: 131 QKE----QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ--PDTL 184 + + L +D + P++ + + H++ NRA E + L Sbjct: 215 ADQAVLKEREFLQTVIDGIADPIMAISTDYHVILANRAARES--HPEHALQPGPTLCYQL 272 Query: 185 LNIPEFPADNRIR---LQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNL 241 + + P + + L Q+L ++ L EK + SP+Y+ ++ + Sbjct: 273 SHGSDTPCSDTNQKCPLCQVLKTGKEAREIHEHLRAGHEKRTYEIKASPLYNEDHSIRGI 332 Query: 242 VMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICR 280 + T D+T+ + ++ + + Sbjct: 333 IETSRDLTDILNSEAELNEKTQHLQFVTTHDQLTHLPNK 371 >UniRef50_B8GLY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GLY5_THISH Length = 1082 Score = 789 bits (2038), Expect = 0.0, Method: Composition-based stats. Identities = 187/764 (24%), Positives = 322/764 (42%), Gaps = 42/764 (5%) Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA 120 + + + + + + + + + V + Sbjct: 316 LSELWVQYQWQISAGFLLLFGLALALFRGQRLNRRLAEAGRLLQSRVEMRTEHLNVANRS 375 Query: 121 LVRDASVEMAQKE----QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 L R+ + Q+R+ ++ +D + LD + + N A + G I + Sbjct: 376 LQREVEQRRQAEAEVLAQSRRQAQVLEAVDEAIFGLDADCRVEFANPAAEALAGCSIGQM 435 Query: 177 SGMQPDTLLNIPEF------PADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISP 230 G + +L I + D + + + R + L R G + + + P Sbjct: 436 RGQRLSGVLQIRDDQGRSAWEPDGDCLAEDPMPVSIRRAFDQTLYHRDGRVLVVDYAFRP 495 Query: 231 VYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIES 284 + ++ V + DIT ++I + ++ + + + R E Sbjct: 496 IL-EGGQVRGGVFSCRDITGRKRIEESLRLHAQVFDTATEGVMIADARGRILSVNRAFEQ 554 Query: 285 VLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQIK 337 V S + L +G I+ WS I R++DG Sbjct: 555 VTGYSAEEVVGRNPSILSSGRQDKAFYRRMWDTIKGEGIWSGEIWNRRKDGEIYPEWLTI 614 Query: 338 TS---SGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYL 394 +S E S F+ +DI+ Q++S Q I+ L DP+TGL NRN + L Sbjct: 615 SSIAGPNGEASHFVAVFSDITA--------QKRSEQEIDFLANHDPLTGLANRNLFEDRL 666 Query: 395 DDLVDKA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRI 450 + A + L+ +D + + D +G+ D L E R ++ + R+ Sbjct: 667 AHAISMAGRNGQHVGLLLVDLDRFRLINDGMGHGPGDALLRETGRRLGHCVRDSDTVARL 726 Query: 451 EGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDY 507 G +F ++ D ++ A+ + + P+ + + T+SIGI+ G + Sbjct: 727 GGDEFGIILEGLADAADAGMQAERILEAMRAPLRLGGQELFCTVSIGIAVFPADGTDAAT 786 Query: 508 LLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFA 567 LL A AM ++ G N +QF++ A+ E V RL + L+ A+ ++L+L YQP + A Sbjct: 787 LLRHADTAMALAKREGRNNFQFYTHALTEAVFSRLNIETGLRHALERDELRLHYQPILDA 846 Query: 568 ETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNI 627 +G + +E+L RW P G V P FIP+AE+ I +GRW + AC Q+ W + Sbjct: 847 ASGRIAAMESLMRWQHPERGLVSPGVFIPVAEQSDLILALGRWALVSACAQVRAWSDAGL 906 Query: 628 HIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQIL 687 +SVN+ A HFR +V + G+ L +E+TES +ME + +RI+ L Sbjct: 907 EPVPVSVNIPACHFRQPGFVEEVLGVVRETGVQPQSLIIELTESALMEPVSLAEERIRRL 966 Query: 688 RDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSL 747 RD GV +++DDFGTG+S L L V +K+D+SFV ++ A+ EA+ + SL Sbjct: 967 RDTGVVVAIDDFGTGYSSLGYLQRFHVNYLKVDRSFVSGLPGDENARAITEAVIGVSHSL 1026 Query: 748 NLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 L VVAEGVET+ Q + LR C +QGY RP+ AE + Sbjct: 1027 GLQVVAEGVETQAQLDHLRATGCDKVQGYLTGRPVTAEVAATLL 1070 Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 91/262 (34%), Gaps = 6/262 (2%) Query: 2 KLTDADNAADGIFFP-ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 + +A+ A LE ++ + V F NPAAE L G ++ G + + Sbjct: 384 RQAEAEVLAQSRRQAQVLEAVDEAIFGLDADCRVEFANPAAEALAGCSIGQMRGQRLSGV 443 Query: 61 IPRDL---RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV- 116 + R A E + + L +DG + +A + G+V Sbjct: 444 LQIRDDQGRSAWEPDGDCLAEDPMPVSIRRAFDQTLYHRDGRVLVVDYAFRPILEGGQVR 503 Query: 117 YYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 + RD + +E R D V++ D I+ NRAF ++ GY E Sbjct: 504 GGVFSCRDITGRKRIEESLRLHAQVFDTATEGVMIADARGRILSVNRAFEQVTGYSAEEV 563 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 G P +L+ R+ + E + GE +IS + Sbjct: 564 VGRNPS-ILSSGRQDKAFYRRMWDTIKGEGIWSGEIWNRRKDGEIYPEWLTISSIAGPNG 622 Query: 237 HLQNLVMTFSDITEERQIRQLE 258 + V FSDIT +++ Q Sbjct: 623 EASHFVAVFSDITAQKRSEQEI 644 Score = 110 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 71/223 (31%), Gaps = 39/223 (17%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 ++ ++ + + G ++ + ++ N A E++ GY EEV+G N +L Sbjct: 517 RIEESLR----LHAQVFDTATEGVMIADARGRILSVNRAFEQVTGYSAEEVVGRNPSILS 572 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYYL 119 A + S E+ +KDG +S + +++ Sbjct: 573 SGRQDKAFYRRM----WDTIKGEGIWSGEIWNRRKDGEIYPEWLTISSIAGPNGEASHFV 628 Query: 120 ALVRDASVEMAQKEQ-------------------TRQLIIAVDHL-----DRPVIVLDPE 155 A+ D + + +++ +L A+ ++++D + Sbjct: 629 AVFSDITAQKRSEQEIDFLANHDPLTGLANRNLFEDRLAHAISMAGRNGQHVGLLLVDLD 688 Query: 156 RHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRL 198 N G+ +A + L +D RL Sbjct: 689 -RFRLINDGM----GHGPGDALLRETGRRLGHCVRDSDTVARL 726 >UniRef50_Q12L20 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Shewanella RepID=Q12L20_SHEDO Length = 1047 Score = 789 bits (2038), Expect = 0.0, Method: Composition-based stats. Identities = 187/824 (22%), Positives = 341/824 (41%), Gaps = 51/824 (6%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 + D +F + +G + ++ + NP K+ Y +E+ L Sbjct: 222 MQIRLQE-DFLFKNQFDIGNIGIAITSKAKYWLKVNPCICKMLKYSEKELTRMTWKELTH 280 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALS-KVSAEGKVYYLAL 121 + Y +G + + + KDG+ ++T ++ + G + +A Sbjct: 281 PEDLEKDLSYFNRMLKGEISE---YEIDKRFIAKDGAIVYTHLTVACRFYDNGSMLVIAG 337 Query: 122 VRDASVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 D + + + QL + +D D + + V N ++ G ++ Sbjct: 338 FLDITKLKQAEAALQNSKEQLALVLDSSDLGIWDWHINTNEVASNLRSAQIIGCELA-LL 396 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLW----KTARDQDEFLLLTRTGEKIWIKASISPVYD 233 +P L D + ++ LL ++ + E+ + + G+ WI + V Sbjct: 397 NQKPS-LWFKAIIAEDRKRLIKSLLAIRKGQSIHHKIEYRIRSLNGDIRWILDTGKVVEV 455 Query: 234 VL-AHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICR------NIESVL 286 + T +DIT+ ++ + + +S + + + + Sbjct: 456 ADTGQPLRMCGTHTDITDLKRAEESLSIAASVYRNSSEAMCVFDYQGKIVNTNPAFSEIT 515 Query: 287 NESHVSLFALRNGMPIHWASSSH-----GAEIQNAQSWSATI--RQRDGAPAGILQIKTS 339 + + + H + + W + ++++G + Sbjct: 516 GFDADEVIGQHLAVLQKEEQAEHFNLQLEQYLFEKRYWQGELSFQRKNGQTYTAWVTINA 575 Query: 340 SGAETSA---FIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDD 396 G + + AD+S E++++ + I +D +TGLPNR L Y+ Sbjct: 576 IGELDTCDTLNVMLFADVS--------EKKQAEELIWLQANYDTLTGLPNRRMLLEYIKL 627 Query: 397 LVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEG 452 + + + +D ++V DSLG+ D L+E R + ++ + RI G Sbjct: 628 QIANCTRDNQGFALLFLDLDFFKEVNDSLGHDMGDSLLVEASQRIKACIRDADLVARIGG 687 Query: 453 TQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLL 509 +F +V + + ++ +++ +S+P M+ + ++ SIGI+ D D LL Sbjct: 688 DEFTIVLTDFTGPKGVERVTNKILKQLSEPFMLGSEMAYISGSIGITLYPDDALTIDGLL 747 Query: 510 STAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFA-- 567 A AM + +G N + +F+P M E R+ L LK AI + +L YQP I Sbjct: 748 KNADQAMYSAKAHGRNKFNYFTPKMQETALRRMKLIQDLKTAIKMEEFELYYQPIIDFSA 807 Query: 568 -ETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN 626 + + EAL RWH P G + P FIP+AE+ G I IG WV +ACRQ A+W+ Sbjct: 808 NASDNITKAEALIRWHHPKLGFISPVDFIPIAEDTGMIVEIGNWVFRQACRQAAQWKQTY 867 Query: 627 IHIPALSVNLSALHFRS-NQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQ 685 +S+N S + FR + M + + VEITE +++E ++ + ++ Sbjct: 868 GLDIQISINKSPVQFRDERSSVTSWTQYMSELNLSPASICVEITEGLLLETESGVGAKLA 927 Query: 686 ILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQ 745 RD G+ +S+DDFGTG+S LS L + +KIDKSFV L+L EAI + Sbjct: 928 AFRDAGMQISLDDFGTGYSSLSYLKKFDIDYLKIDKSFVSNLEDNTNDLSLCEAIIVMSH 987 Query: 746 SLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPG 789 L + V+AEG+ET+ Q ML C QGY FS+P+ AE+ Sbjct: 988 KLGIKVIAEGIETELQRAMLECAGCDYGQGYLFSKPVKAEDFES 1031 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 43/273 (15%), Positives = 92/273 (33%), Gaps = 7/273 (2%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + A + L+ + +G + N + N + ++ G + ++ + Sbjct: 346 QAEAALQNSKEQLALVLDSSDLGIWDWHINTNEVASNLRSAQIIGCELA-LLNQKPSLWF 404 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV---SAEGKVYY 118 + I+ K + E ++ +G W V + Sbjct: 405 KAIIAEDRKRLIKSLLAIRKGQSIHHKIEYRIRSLNGDIRWILDTGKVVEVADTGQPLRM 464 Query: 119 LALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 D + +E + + V D + IV N AF+E+ G+ E G Sbjct: 465 CGTHTDITDLKRAEESLSIAASVYRNSSEAMCVFDYQGKIVNTNPAFSEITGFDADEVIG 524 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 +L E ++L+Q L++ Q E + G+ +I+ + ++ Sbjct: 525 QHL-AVLQKEEQAEHFNLQLEQYLFEKRYWQGELSFQRKNGQTYTAWVTINAIGELDTCD 583 Query: 239 QNLVMTFSDITEERQIRQLEGNILAAMCSSPPF 271 VM F+D++E++Q +L L A + Sbjct: 584 TLNVMLFADVSEKKQAEELI--WLQANYDTLTG 614 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 788 bits (2037), Expect = 0.0, Method: Composition-based stats. Identities = 148/584 (25%), Positives = 283/584 (48%), Gaps = 29/584 (4%) Query: 231 VYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMG---EIICRNIESVLN 287 + V+ + I E+ + + + + + E + + Sbjct: 120 LRAVIGQCMTSIKWERQIREQEKFIRKLSRAVEQSPVAIIITDTSGTIEYVNPRFTQLTG 179 Query: 288 ESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQIK--- 337 + L++G I W R+++G Sbjct: 180 YTSAETIGKKPHILKSGETPPEEYRKLWEIISGGGEWWGEFHNRKKNGELYWASASISPI 239 Query: 338 TSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDL 397 T+ + + FI DI+ E++++ + I+Q+ +D +TGLPNR+ + + Sbjct: 240 TNGNEQITHFIAFQEDIT--------ERKQAEETIKQMAYYDTLTGLPNRHLFNELMHLA 291 Query: 398 VDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLK-PDQYLCRIEG 452 + +A V + +D + + D+LG+ DQ L +R +E + + R G Sbjct: 292 LAQAHRHNRLLAVLFLDLDRFKHINDTLGHTVGDQLLQASAHRLKECCRRDRDTVARRGG 351 Query: 453 TQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLL 509 +F+++ + +DV ++A ++ + ++ ++ D ++ IGIS G++ + L+ Sbjct: 352 DEFIILLPDIDDVQEAVRVAQKIIDAFTQVFVLPDIELFISTCIGISIFPNDGRDTETLI 411 Query: 510 STAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAET 569 A AM ++ G + + ++ +M+E RL + +L++A+ + L YQP++ +T Sbjct: 412 KNADMAMYRAKEQGRSRYHLYTSSMDEQAFRRLTMENSLRKALQREEFSLYYQPKVNIKT 471 Query: 570 GELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHI 629 G++ +EAL RW +P G + P++FIPLAE+ G I +G WV+ AC Q W+ N Sbjct: 472 GQIVCLEALVRWQNPEMGLILPNQFIPLAEDTGLIIPLGEWVLRTACAQNKTWQLLNYPP 531 Query: 630 PALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRD 689 ++VN S F+ +L + V + + L +E+TE++M+++ + + + L + Sbjct: 532 MRVAVNFSPRQFQQPRLTDMVEQILGEADLAPCWLELELTENVMLQNVEKTVQTLNRLSN 591 Query: 690 MGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNL 749 +G+ +S+DDFGTG+S LS + LP+ +KID+SFV T A+ A+ ++ QSL L Sbjct: 592 LGIHISIDDFGTGYSSLSYIKKLPIQTLKIDRSFVHDINTNADDAAIAIAVITMAQSLRL 651 Query: 750 TVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 V+AEGVET EQ ++L ++C +QGY FS+PLP E+ +S+ Sbjct: 652 NVIAEGVETLEQMKLLDGLNCPEMQGYLFSKPLPVAEMTTLLSN 695 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 1/134 (0%) Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 Q++ R+L AV+ +I+ D I N FT++ GY +E G +P +L Sbjct: 138 REQEKFIRKLSRAVEQSPVAIIITDTSGTIEYVNPRFTQLTGYTSAETIGKKPH-ILKSG 196 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 E P + +L +++ EF + GE W ASISP+ + + + + DI Sbjct: 197 ETPPEEYRKLWEIISGGGEWWGEFHNRKKNGELYWASASISPITNGNEQITHFIAFQEDI 256 Query: 249 TEERQIRQLEGNIL 262 TE +Q + + Sbjct: 257 TERKQAEETIKQMA 270 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 33/241 (13%), Positives = 75/241 (31%), Gaps = 32/241 (13%) Query: 1 MKLTDADNAAD---GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNI 57 +K + A+EQ+ + ++ + + + + NP +L GY E IG Sbjct: 131 IKWERQIREQEKFIRKLSRAVEQSPVAIIITDTSGTIEYVNPRFTQLTGYTSAETIGKKP 190 Query: 58 DMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV- 116 +L + P + GG E KK+G W ++S ++ + Sbjct: 191 HILKSGETPPEEYRKLWEIISGG----GEWWGEFHNRKKNGELYWASASISPITNGNEQI 246 Query: 117 -YYLALVRDASVEMAQKEQTRQL------------IIAVDHLDRPVIVLDPERHIVQC-- 161 +++A D + +E +Q+ + + + + ++ Sbjct: 247 THFIAFQEDITERKQAEETIKQMAYYDTLTGLPNRHLFNELMHLALAQAHRHNRLLAVLF 306 Query: 162 --NRAFTEMFGYCISEASGMQPDT--LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTR 217 F + ++ G L + R + + + D+ LL Sbjct: 307 LDLDRFKHI-----NDTLGHTVGDQLLQASAHRLKECCRRDRDTVARRGGDEFIILLPDI 361 Query: 218 T 218 Sbjct: 362 D 362 >UniRef50_Q88LF0 Sensory box protein n=16 Tax=Proteobacteria RepID=Q88LF0_PSEPK Length = 1136 Score = 788 bits (2037), Expect = 0.0, Method: Composition-based stats. Identities = 185/831 (22%), Positives = 340/831 (40%), Gaps = 53/831 (6%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + A + AL+ +G + +++ + A +L G + D Sbjct: 311 RAEQALKDSQERLDLALDSAQLGTWDWHIPSGMLYGSARAAQLHGLPPIPF-HESFDAFF 369 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYL 119 + R + +++ ++G+ + + + Sbjct: 370 EGVPEHERNSMRQAYRSLREGPAGNYQITYRVQLENGTSRYIESRARLYRDDQGIPLRMA 429 Query: 120 ALVRDASVEMAQKEQT----RQLIIAVDHLDRPVIVLDPE-RHIVQCNRAFTEMFGYCIS 174 + D + ++ ++++ + P+ V + ++ N AFT+ FG+ + Sbjct: 430 GTLLDITDQVEREQRLSASEEKFASLFQVSPDPICVTRQDTGQFIEINPAFTQTFGWSSA 489 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 + G + + E + R++Q++ + A +L R G+ + S + Sbjct: 490 QVLGRTAEEIGLWAESV-ERAKRIEQVIREQALSNVAVVLNHRNGDPLTCVISSRLITVD 548 Query: 235 LAHLQNLVMTFSDITEERQIRQLEG----NILAAMCSSPPFHEMGEI-------ICRNIE 283 V T DIT++++ A SSP + E + Sbjct: 549 DQ--PCSVTTLRDITQQQRAEAALKSSEEKFAKAFHSSPDAITITERHSGRYLEVNDGFC 606 Query: 284 SVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATI-------RQRDGAPAGILQI 336 + S + WA + + + R + G + Sbjct: 607 RLTGYSTDEVIGHTVYEIGIWADDKQRSALLAELRERGRVHHREMLGRNKRGDILTVEVS 666 Query: 337 KTSSG-AETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLD 395 E + D+SQ + ++ I L DP+T LPNR L + L Sbjct: 667 VEPITLNEVDCLLLTARDVSQ--------LKNAQAQIRHLAYHDPLTNLPNRALLMDRLS 718 Query: 396 DLVD----KAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIE 451 + + + + +DH + + DSLG+ D L + R ++ + + R+ Sbjct: 719 QQIALLKRHNLRGALLFLDLDHFKHINDSLGHPVGDTVLKIITARLEASVRLEDTVARLG 778 Query: 452 GTQFVLVSLEND------VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGK 503 G +FV++ + + ++AD LR ++++P+ +D + +T SIG++ D G Sbjct: 779 GDEFVVLLSGLEGSREHVEEKVRELADTLRELLAEPMSLDGQRLQVTPSIGVALIPDHGT 838 Query: 504 NRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQP 563 LL A A+ + +G N Q F M + ERL + L+ A++ +L L +QP Sbjct: 839 TPADLLKRADIALYRAKDSGRNTTQLFHTTMQKAASERLRMENDLRLALARGELALHFQP 898 Query: 564 QIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWR 623 Q+ A + G E L RWH P G PPS+FI + EE G I +G W++ EAC A Sbjct: 899 QVDARDNRIVGAEVLLRWHHPQLGQQPPSQFIQVLEESGLILEVGSWILDEACDACARML 958 Query: 624 SQNI---HIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEI 680 + + L VN+S FR N +V ++ + + LT+EITE +++++ + Sbjct: 959 TDGLIDADDFNLCVNISPRQFRQNDFVGRVLRSLDDYRLPRQMLTLEITEGIVIQNLEDT 1018 Query: 681 FKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAI 740 ++ L+ GV ++DDFGTG+S L+ L LPV +KID+SFV + ++ AI Sbjct: 1019 ISKMCELKRYGVSFAMDDFGTGYSSLTYLKRLPVDALKIDQSFVRDAPVDPNDAEIVRAI 1078 Query: 741 TSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 ++ +SL+L V+AEGVE EQ L ++ C + QGY SRPLP E + Sbjct: 1079 VAMARSLDLAVIAEGVELTEQLAFLERLGCHLYQGYLHSRPLPLPEFRQML 1129 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 31/266 (11%), Positives = 92/266 (34%), Gaps = 13/266 (4%) Query: 1 MKLTDADNAADGIFFPALEQNMMGAVLINEN-DEVMFFNPAAEKLWGYKREEVIGNNIDM 59 ++ +A++ F + + + ++ + + NPA + +G+ +V+G + Sbjct: 439 VEREQRLSASEEKFASLFQVSPDPICVTRQDTGQFIEINPAFTQTFGWSSAQVLGRTAEE 498 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL 119 + + I + L ++G + + ++ + + + Sbjct: 499 IGLWAESVERAKRIEQVIREQALSNVA----VVLNHRNGDPLTCVISSRLITVDDQPCSV 554 Query: 120 ALVRDASVEMAQKEQT----RQLIIAVDHLDRPVIVLDPE-RHIVQCNRAFTEMFGYCIS 174 +RD + + + + A + + + ++ N F + GY Sbjct: 555 TTLRDITQQQRAEAALKSSEEKFAKAFHSSPDAITITERHSGRYLEVNDGFCRLTGYSTD 614 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 E G + + L +L + E L + G+ + ++ S+ P+ Sbjct: 615 EVIGHTVYEIGIWAD-DKQRSALLAELRERGRVHHREMLGRNKRGDILTVEVSVEPIT-- 671 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGN 260 L + L++T D+++ + + + Sbjct: 672 LNEVDCLLLTARDVSQLKNAQAQIRH 697 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 56/410 (13%), Positives = 119/410 (29%), Gaps = 35/410 (8%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINE-NDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 + A ++ F + +L + + N E ++G+ +VIG L Sbjct: 186 ERETALINSEKRFATLFHLSPNAILLTRRRDGMIFEVNQHFEDMFGWPGSQVIGKTSLEL 245 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA 120 +PE E +A + E+Q G + EG + ++ Sbjct: 246 ----GLWVNPEQRHQIVESTRANGGPLIMEVQFRATSGKVHDGILCTQGIELEGVTFLIS 301 Query: 121 LVRDASVEMAQKEQT----RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 D + ++ +L +A+D ++ + ++ G Sbjct: 302 TFVDTTERKRAEQALKDSQERLDLALDSAQLGTWDWHIPSGMLYGSARAAQLHGLPPIPF 361 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKT--ARDQDEFLLLTRTGEKIWIKASISPVYDV 234 +PE ++ + + L + Q + + G +I++ D Sbjct: 362 HESFDAFFEGVPEHERNSMRQAYRSLREGPAGNYQITYRVQLENGTSRYIESRARLYRDD 421 Query: 235 LAHLQNLVMTFSDITEERQIRQLE----GNILAAMCSSPPFHEMGEI-------ICRNIE 283 + T DIT++ + Q + SP + I Sbjct: 422 QGIPLRMAGTLLDITDQVEREQRLSASEEKFASLFQVSPDPICVTRQDTGQFIEINPAFT 481 Query: 284 SVLNESHVSLFALRNGMPIHWA-SSSHGAEIQNAQSWSA------TIRQRDGAPAG-ILQ 335 S + WA S I+ A + R+G P ++ Sbjct: 482 QTFGWSSAQVLGRTAEEIGLWAESVERAKRIEQVIREQALSNVAVVLNHRNGDPLTCVIS 541 Query: 336 IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQF---DPMT 382 + + + + + DI+Q A A + S + + D +T Sbjct: 542 SRLITVDDQPCSVTTLRDITQQQRAEAA-LKSSEEKFAK-AFHSSPDAIT 589 Score = 116 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 49/401 (12%), Positives = 116/401 (28%), Gaps = 44/401 (10%) Query: 8 NAADG------IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNID--M 59 ++ AL +GA L + + ++ + L+G+ + + +ID Sbjct: 58 QESEQAWQNAPQLLAALNGAHLGAWLWDIESGRVSWSRGTQALFGFDPQRPLPADIDYLD 117 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA-EGKVYY 118 L+P + R + + G + ++ DGS W S G+ Sbjct: 118 LLPEEDRARTRQVFQAVVNGEPVEQ---AMRHRIRWPDGSLHWLEINGSLTHDPHGRPQM 174 Query: 119 LALVRDASVEMAQKEQT----RQLIIAVDHLDRPVIVL-DPERHIVQCNRAFTEMFGYCI 173 + ++R+ + + ++ ++ +++ + I + N+ F +MFG+ Sbjct: 175 IGVIREITRQRERETALINSEKRFATLFHLSPNAILLTRRRDGMIFEVNQHFEDMFGWPG 234 Query: 174 SEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYD 233 S+ G L P ++ E +G+ + Sbjct: 235 SQVIGKTSLELGLWVN-PEQRHQIVESTRANGGPLIMEVQFRATSGKVHDGILCTQGI-- 291 Query: 234 VLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEM--GEIICRNIESVLNESHV 291 L + L+ TF D TE ++ Q + + + ++ + + + Sbjct: 292 ELEGVTFLISTFVDTTERKRAEQALKDSQERLDLALDSAQLGTWDWHIPSGMLYGSARAA 351 Query: 292 SLFAL------------------RNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGI 333 L L + A S + ++ +G I Sbjct: 352 QLHGLPPIPFHESFDAFFEGVPEHERNSMRQAYRSLREGPAGNYQITYRVQLENGTSRYI 411 Query: 334 LQ---IKTSSGAETSAFIERVADISQHMAALALEQEKSRQH 371 + + DI+ + S + Sbjct: 412 ESRARLYRDDQGIPLRMAGTLLDITDQVEREQRLS-ASEEK 451 Score = 92.4 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 42/300 (14%), Positives = 85/300 (28%), Gaps = 45/300 (15%) Query: 124 DASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDT 183 D + QL+ A++ + D E V +R +FG+ D Sbjct: 56 DPQESEQAWQNAPQLLAALNGAHLGAWLWDIESGRVSWSRGTQALFGFDPQRPLPADIDY 115 Query: 184 L-LNIPEFPADNRIRLQQLLWKTARDQ-DEFLLLTRTGEKIWIKASISPVYDVLAHLQNL 241 L L E A R Q ++ +Q + G W++ + S +D Q + Sbjct: 116 LDLLPEEDRARTRQVFQAVVNGEPVEQAMRHRIRWPDGSLHWLEINGSLTHDPHGRPQ-M 174 Query: 242 VMTFSDITEERQIRQLE-------GNILAAMCSSPPFHEMGE----IICRNIESVLNESH 290 + +IT +R+ + ++ + + ++ E + Sbjct: 175 IGVIREITRQRERETALINSEKRFATLFHLSPNAILLTRRRDGMIFEVNQHFEDMFGWPG 234 Query: 291 VSLFALRNGMPIHWASSSHGAEIQNAQSWSA-------TIRQRDGAPA-GILQIKTSSGA 342 + + W + +I + + R G GIL + Sbjct: 235 SQVIGKTSLELGLWVNPEQRHQIVESTRANGGPLIMEVQFRATSGKVHDGILCTQGIELE 294 Query: 343 ETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV 402 + I D + E++++ D LD +D A Sbjct: 295 GVTFLISTFVDTT--------ERKRAE-----QALKDS----------QERLDLALDSAQ 331 >UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9S8_MAGSM Length = 971 Score = 788 bits (2035), Expect = 0.0, Method: Composition-based stats. Identities = 165/698 (23%), Positives = 302/698 (43%), Gaps = 36/698 (5%) Query: 119 LALVRDASVEMAQKEQTRQLIIA-VDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 L L R+ S++ A +++ I + H D E + + + + Sbjct: 273 LRLEREESLKQAAEKREELARIIEISHTVVLSWENDEEWSLSYVSENCYRILQSGLKSLV 332 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 L+N + P L + + EF L + E W + + P+ D A Sbjct: 333 LKP---LVNPEDLPQME-ALLAAGGDASRWVKLEFRLCLGSEEPRWFECCVLPIKDDHAE 388 Query: 238 LQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMG------EIICRNIESVLNESHV 291 + DITE R+ ++ + E++ + Sbjct: 389 VVQYHGVLHDITERRKGEHDLRLAQVLFRTTNEALMISSRDNKIEMVNPAFSRITGYQLD 448 Query: 292 SLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGIL---QIKTSSG 341 + L++G + +Q +W I R++ G T+ Sbjct: 449 EVLGKGPDLLQSGRHDAPFYTQMWHALQQDGAWEGEIWNRRKSGETYPEWLSIATVTNDK 508 Query: 342 AETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA 401 ET ++ +DI++ ++++ + I +D +T LPNRN H+ L + ++ Sbjct: 509 GETVQYVAAFSDITK--------RKQAEETILHQANYDFLTDLPNRNLFHDRLQTELKRS 560 Query: 402 VS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVL 457 + I +D + V D+LG+ DQ L EV R ++ + R+ G +F + Sbjct: 561 QRSGQQVALLFIDLDRFKFVNDTLGHNVGDQLLREVAIRLGHCVRESDTIARLGGDEFTV 620 Query: 458 VSLEND-VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHN 514 + E + ++A + + + + I D ++ SIGI+ N L+ A Sbjct: 621 ILPELHGPEGVARLAQGMIDKLEERYCIQDHELFISASIGITIYPEDADNMMDLVKNADV 680 Query: 515 AMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYG 574 AM ++NG + F++ MN ++ + AL+ A+ Q + YQP + +G + G Sbjct: 681 AMYRAKENGRGSFCFYTAEMNADARQLHKIEQALRVALEEGQFWIHYQPYVQQSSGLITG 740 Query: 575 IEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSV 634 +EAL RW + V P +FIP+AEE G I IG WV+ +A+W+ + SV Sbjct: 741 VEALIRWRNSAGEIVYPDQFIPVAEETGLIVPIGLWVLRSVIGVIAQWQREGHPDITFSV 800 Query: 635 NLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGL 694 N+SA F+ L Q+ A+ I+ L +EITES+M+ ++ ++ +GV + Sbjct: 801 NVSARQFQEGHLVGQIKAALQENQINPQSLMLEITESLMIRDPEHTLNMLKEIKALGVRV 860 Query: 695 SVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAE 754 ++DDFGTG+S L L P+ +KID+SF++ + ++ AI S+ SL + V+ E Sbjct: 861 ALDDFGTGYSSLGYLKQFPIDLLKIDRSFINGIANSQDDETMVSAIVSMAHSLGVGVIGE 920 Query: 755 GVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 G+E +Q + + C +QG+F+SRP+P +E+ + Sbjct: 921 GIENDQQLQRVNLHACDYVQGFFYSRPMPYDELALFFE 958 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 90/271 (33%), Gaps = 19/271 (7%) Query: 1 MKLTDAD-NAADGI--FFPALEQNMMGAVLI--NENDEVMFFNPAAEKLW--GYKREEVI 53 ++ ++ AA+ +E + + +E + + + ++ G K Sbjct: 275 LEREESLKQAAEKREELARIIEISHTVVLSWENDEEWSLSYVSENCYRILQSGLK----- 329 Query: 54 GNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAE 113 +++ + P + G + E +L W + + + Sbjct: 330 ----SLVLKPLVNPEDLPQMEALLAAGGDASRWVKLEFRLCLGSEEPRWFECCVLPIKDD 385 Query: 114 GK--VYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY 171 V Y ++ D + + R + + +++ + I N AF+ + GY Sbjct: 386 HAEVVQYHGVLHDITERRKGEHDLRLAQVLFRTTNEALMISSRDNKIEMVNPAFSRITGY 445 Query: 172 CISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV 231 + E G P LL A ++ L + + E ++GE SI+ V Sbjct: 446 QLDEVLGKGP-DLLQSGRHDAPFYTQMWHALQQDGAWEGEIWNRRKSGETYPEWLSIATV 504 Query: 232 YDVLAHLQNLVMTFSDITEERQIRQLEGNIL 262 + V FSDIT+ +Q + + Sbjct: 505 TNDKGETVQYVAAFSDITKRKQAEETILHQA 535 >UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LA87_MAGSM Length = 1070 Score = 788 bits (2035), Expect = 0.0, Method: Composition-based stats. Identities = 177/824 (21%), Positives = 327/824 (39%), Gaps = 41/824 (4%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 A+ + +G + + ++ +++ + G + + Sbjct: 245 LERYQARLGLAMAASRIGIWEWDVVTGKVEWDEGMHQIFDLPKGAFDG-TWEGFLALFDG 303 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFA--LSKVSAEGKVYYLALVRD 124 + +E ++ E + + G + L + + + D Sbjct: 304 EDSARLEQCRQESLTEQLR-FELECRTQPVAGVQKTLSLRGELRMPEHGVEAHLIGACWD 362 Query: 125 ASVEMAQK----EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM- 179 S + + E L A + + + M + S Sbjct: 363 ISEQKQAELKLLESRHHLDRAQRLAGLGYWSWNLQGDEQFWSEEIYRMLHRPRAHVSASF 422 Query: 180 -QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 ++ + + + L + E ++ G + Sbjct: 423 ESYMDHVHPDDRQRVRDMVARVLKEPDLFFRVEHRIVRSDGNVRTVLQLGDVERSASGEP 482 Query: 239 QNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIE------SVLNESHVS 292 + T DIT+ ++ ++ + ++ + ++ R I+ + S Sbjct: 483 VRMTGTVQDITDLKRTQENLDLAKYILDTTSDAVIITDVNNRIIDVNHAYTKITGFSRDE 542 Query: 293 LFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQIKT---SSGA 342 + + N S + WS + R+++G + Sbjct: 543 VMGQNPQVVHNEEQGEAFYSRIWQSLLQEGRWSGEVWERRKNGELYPKWMTMRRMLNQYG 602 Query: 343 ETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV 402 ET+ F+ DIS Q+ + + +E+L +DP+T LPNR H L + A Sbjct: 603 ETAFFVGVFVDIST--------QKATEEQMERLAYYDPLTKLPNRALFHERLTQSITTAK 654 Query: 403 S----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVL- 457 V ++ ++ + + +S GY D L++V R E+L+ + RI F + Sbjct: 655 RYKRHVGVVMLDLNRFKLINESYGYGVGDGLLIQVAERIVERLRESDIVARIGADTFAIT 714 Query: 458 VSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNA 515 + IT +A+ L P +++ L ++GI G++ + LL NA Sbjct: 715 LVDLKQEGEITGVANNLLKQFVMPFLVNGHELMLRTAMGIVLYPTDGQDAETLLRHVENA 774 Query: 516 MDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGI 575 + ++ G N ++F+S M+ + +RL L + A+ L YQP++ + G + G+ Sbjct: 775 LGQAKQQGVNNYRFYSEEMSNISNKRLALEQEMHTALEQRDFVLYYQPKVNLQRGVVSGV 834 Query: 576 EALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVN 635 E+L RW G + P FIP+AEE G I +G W++ AC + ++VN Sbjct: 835 ESLIRWQHKQKGMISPVEFIPVAEETGLIVPMGLWILETACAEAKRITDYLGQPFTVAVN 894 Query: 636 LSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLS 695 LSA F+S L +S+ ++ ID L EITESMMM + + + + +R+MGV L+ Sbjct: 895 LSARQFQSRNLLESISETLNNSAIDPSMLEFEITESMMMGNVEKSIETLVAIRNMGVTLA 954 Query: 696 VDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEG 755 +DDFGTG+S LS L P+ +KID+SF+ + A++ AI S+ Q LNL VVAEG Sbjct: 955 IDDFGTGYSSLSYLKRFPINTLKIDQSFIRDLGVDSDDAAIVSAIISMAQDLNLHVVAEG 1014 Query: 756 VETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI 799 E EQ L++ C +QGY+FSRPLP ++ + +K+ Sbjct: 1015 AEKAEQVLFLKERGCETVQGYYFSRPLPQTDLERLLKDPNGIKM 1058 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 57/141 (40%), Gaps = 8/141 (5%) Query: 2 KLTDADNAADGIFFP--ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDM 59 +TD + + L+ ++ + N+ ++ N A K+ G+ R+EV+G N + Sbjct: 491 DITDLKRTQENLDLAKYILDTTSDAVIITDVNNRIIDVNHAYTKITGFSRDEVMGQNPQV 550 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVY 117 + + A I + + S E+ +K+G + ++ + Sbjct: 551 VHNEEQGEAFYSRIWQSLL----QEGRWSGEVWERRKNGELYPKWMTMRRMLNQYGETAF 606 Query: 118 YLALVRDASVEMAQKEQTRQL 138 ++ + D S + A +EQ +L Sbjct: 607 FVGVFVDISTQKATEEQMERL 627 >UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 Tax=Comamonadaceae RepID=D0IUW1_COMTE Length = 900 Score = 787 bits (2034), Expect = 0.0, Method: Composition-based stats. Identities = 200/820 (24%), Positives = 341/820 (41%), Gaps = 42/820 (5%) Query: 8 NAADGIFFPALEQNMMGAVLINEND-EVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 + G ++ E+++ N G E + G + +L+P + + Sbjct: 79 RETAQELELVVRHAPAGMARVHVGGAEIVWANAKLAGWLGCSVESLRGQDFRVLVPVNDQ 138 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA---EGKVYYLALVR 123 ++ +G + + + + G S+V+A +G V + +++ Sbjct: 139 DDVALQLQRLLDGSTDYFQVLRQ--CVNADTGKVTPVLCTTSRVAASGVDGPVALVCVLQ 196 Query: 124 D----ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 D S A L +A++ V D + + + + Y + + Sbjct: 197 DLSEMVSARNAMMRSETMLRLALEGSGNGVWEWDALEQRLNFSTGMSALLRYQGQDLARE 256 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 PE A R + +Q L + + LL G W +A D L Sbjct: 257 FDFHQRLHPEDAAGARAQAEQALEQGSMLVLTARLLCFDGLYRWFRARGQAYKDESGRLI 316 Query: 240 NLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESHVSL 293 + SD T R+ + + ++ + + + +L S + Sbjct: 317 RISGLLSDQTASREADERSRLASTVVDNTIEGVVVTDAHSRILSVNHAFTKLLGFSEAEM 376 Query: 294 FA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGI---LQIKTSSGAE 343 ++G + A + W I R+++G L + + Sbjct: 377 LGKTPRMFKSGRHDKAFYDAMWASMHATGHWQGEIWNRRKNGEVFPERMSLSAVKDANDK 436 Query: 344 TSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA-- 401 + ++ DIS + Q +E L D +TGLPNR+ L + V+ + Sbjct: 437 VTHYVCMFTDISAE--------KAREQQLEFLAHRDTLTGLPNRSQFTRMLGEAVELSQS 488 Query: 402 --VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLV 458 V L +D +DV DS G++ D+ L V + + L+ + R+ G + V+ Sbjct: 489 TNRRMAVLLFNIDRFKDVNDSYGHSIGDEVLRHVSVQMQGALRHGDIIGRLAGDEICVVA 548 Query: 459 SLENDVSNITQIADELRNVVSKPIMI-DDKPFPLTLSIGISY--DLGKNRDYLLSTAHNA 515 + +A+ L +P D +++S GI D D LL AH A Sbjct: 549 QSICGRDSAVDVAERLMAAAGQPWTTPDGLSVVVSVSAGICLYPDHALTADDLLQGAHAA 608 Query: 516 MDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGI 575 + + G N W FF M + +ERL L A L+ A+ ++L YQPQI TG L G Sbjct: 609 VYGAKARGSNAWCFFHENMTQAARERLALEARLRRALELGHMRLYYQPQIELATGRLVGA 668 Query: 576 EALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVN 635 EAL RW DP G + P+RFIP+AE G I +G WV+ EACRQ +WR+ + A++VN Sbjct: 669 EALLRWLDPEEGLISPARFIPVAENSGVIGPLGLWVLGEACRQGQQWRAAGLPDLAIAVN 728 Query: 636 LSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLS 695 +S F + ++A++ G L +EITES + E E + LR++G+ L+ Sbjct: 729 VSLHQFLLTDIAGATAEALNKSGFPASLLELEITESALAEKPEEALAVLNRLRELGLRLA 788 Query: 696 VDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEG 755 +DDFGTG+S L+ L P+ +KID+ F+ + + ++ ++G ++ L V+AEG Sbjct: 789 IDDFGTGYSSLAHLKRFPLDLLKIDQGFIRDIPHSADDMTISSSVIALGHAMGLKVLAEG 848 Query: 756 VETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 VET+EQ L++ C QGYF SRPLPAE+ + Sbjct: 849 VETQEQLSFLQQKGCDYFQGYFCSRPLPAEDFTRLLEKTR 888 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 92/257 (35%), Gaps = 8/257 (3%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML-IPR 63 +A ++ + ALE + G + ++ + F+ L Y+ +++ + Sbjct: 206 NAMMRSETMLRLALEGSGNGVWEWDALEQRLNFSTGMSALLRYQGQDL----AREFDFHQ 261 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLAL 121 L P R E + + +L DG W R E + L Sbjct: 262 RLHPEDAAGARAQAEQALEQGSMLVLTARLLCFDGLYRWFRARGQAYKDESGRLIRISGL 321 Query: 122 VRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 + D + E++R VD+ V+V D I+ N AFT++ G+ +E G P Sbjct: 322 LSDQTASREADERSRLASTVVDNTIEGVVVTDAHSRILSVNHAFTKLLGFSEAEMLGKTP 381 Query: 182 DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNL 241 + + + T Q E + GE + S+S V D + + Sbjct: 382 -RMFKSGRHDKAFYDAMWASMHATGHWQGEIWNRRKNGEVFPERMSLSAVKDANDKVTHY 440 Query: 242 VMTFSDITEERQIRQLE 258 V F+DI+ E+ Q Sbjct: 441 VCMFTDISAEKAREQQL 457 >UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Pseudomonas RepID=A4Y0Z3_PSEMY Length = 960 Score = 787 bits (2034), Expect = 0.0, Method: Composition-based stats. Identities = 185/768 (24%), Positives = 335/768 (43%), Gaps = 40/768 (5%) Query: 58 DMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVY 117 L+ R A + H ++ + E ++RE++ ++ + E +V Sbjct: 206 RSLLQRFHNQALIANLEHAKQRAEGLNEELAREVEQRRRAER----ELRGAHGELEMRVA 261 Query: 118 YLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA- 176 L D A + +L +A++ + + D E V + E+FG + Sbjct: 262 ERTLELD-EATHALGKSQARLALALEASELGLWDWDLESDQVHHSH-LRELFGLEPEQVQ 319 Query: 177 -SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV-YDV 234 L+ + P R ++ + ++ Q E+ + G +W++ V D Sbjct: 320 VMLRDLTPRLHPDDLPRLRRALVEHMKGRSEDYQIEYRVRHVDGHWVWVEDRGRAVERDA 379 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNE 288 ++ ++ T D++ RQ Q + ++ + + + R +V Sbjct: 380 AGRVRRMLGTRRDVSARRQQEQEQRLAATVFEAASEGIFILDPDYRVLAVNRAFSAVTGY 439 Query: 289 SHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATIR--QRDGAPAGILQ---IKT 338 S + L + E+ + SW + ++ G + Sbjct: 440 SREEVVGRTVTSLIGSREMRRQYQMIRQELDGSGSWQGELIETRKSGELYPQWLQLNLVR 499 Query: 339 SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV 398 + S + AD++ + ++ + + L +D +TGL NR+ L + Sbjct: 500 DASGRPSHIVGFFADLTA--------RREAEERLRYLSHYDELTGLANRSLFKERLHEAS 551 Query: 399 DKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQ 454 +A + I +D + + DSLG+ ADQ L ++ R + + + R+ G + Sbjct: 552 QRARQSGRSIALVHIDLDRFKLLNDSLGHEVADQLLRQMSRRLTQAVPEADCIARLSGDE 611 Query: 455 FVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLST 511 F ++ +S++ ++A L + P+ + ++ S+GIS D + L+S Sbjct: 612 FAILLDAYGSLSSLARVASRLLAKLRLPMDVGGHELVVSASLGISLLPDYAREIGALISQ 671 Query: 512 AHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGE 571 A+ A+ + + GGN +QFF+ + ERL L L++AI QL++ YQP++ + Sbjct: 672 ANMAVQHAKHLGGNTFQFFTDNLQACTLERLQLENQLRKAIEEGQLEVFYQPKLNLADDQ 731 Query: 572 LYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPA 631 L EAL RW P G V P FI LAEE G I IG +V+ +ACRQ +W+ Q + Sbjct: 732 LNAAEALVRWRHPQQGLVAPGEFIGLAEETGLIAPIGEFVLRQACRQARQWQQQGLAEIR 791 Query: 632 LSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMG 691 +SVN+S R L + V + G+ L +E+TES ++++ + + LR++G Sbjct: 792 VSVNISVYQLRQGNLTSLVRQVLEETGLAPQYLELELTESQLLDNVDSVVVTFRQLRELG 851 Query: 692 VGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTV 751 V L++DDFGTG+S LS L PV +KID++F+ A+ AI ++ SL L V Sbjct: 852 VKLAIDDFGTGYSSLSYLKRFPVHYVKIDQTFIRDLSPGGEDAAITRAIIAMAHSLELKV 911 Query: 752 VAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI 799 VAEGVET+ Q + L+ +C IQGY SRP+ A + + + Sbjct: 912 VAEGVETQAQMDFLKSQNCDEIQGYLISRPVEAAAFAELLRAQRDDPL 959 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 100/261 (38%), Gaps = 6/261 (2%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + T A + ALE + +G + + + + +L+G + E+V + L Sbjct: 269 EATHALGKSQARLALALEASELGLWDWDLESDQVHHSH-LRELFGLEPEQVQVM-LRDLT 326 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK---VYY 118 PR P R E K R E E ++ DG +W V + Sbjct: 327 PRLHPDDLPRLRRALVEHMKGRSEDYQIEYRVRHVDGHWVWVEDRGRAVERDAAGRVRRM 386 Query: 119 LALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 L RD S Q+++ R + + +LDP+ ++ NRAF+ + GY E G Sbjct: 387 LGTRRDVSARRQQEQEQRLAATVFEAASEGIFILDPDYRVLAVNRAFSAVTGYSREEVVG 446 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 +L+ E ++Q L + Q E + ++GE ++ V D Sbjct: 447 RTVTSLIGSREMRRQ-YQMIRQELDGSGSWQGELIETRKSGELYPQWLQLNLVRDASGRP 505 Query: 239 QNLVMTFSDITEERQIRQLEG 259 ++V F+D+T R+ + Sbjct: 506 SHIVGFFADLTARREAEERLR 526 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 49/148 (33%), Gaps = 7/148 (4%) Query: 4 TDADNAADGIFFP-ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 + E G +++ + V+ N A + GY REEV+G + LI Sbjct: 395 ARRQQEQEQRLAATVFEAASEGIFILDPDYRVLAVNRAFSAVTGYSREEVVGRTVTSLIG 454 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYLA 120 + IR +G EL +K G W + L + ++ + + Sbjct: 455 SREMRRQYQMIRQELDGS----GSWQGELIETRKSGELYPQWLQLNLVRDASGRPSHIVG 510 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRP 148 D + +E+ R L + Sbjct: 511 FFADLTARREAEERLRYLSHYDELTGLA 538 >UniRef50_Q2RRN9 Sensor protein n=3 Tax=Proteobacteria RepID=Q2RRN9_RHORT Length = 1301 Score = 787 bits (2034), Expect = 0.0, Method: Composition-based stats. Identities = 189/696 (27%), Positives = 308/696 (44%), Gaps = 32/696 (4%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 + +M +E + + + LDP+ H ++ N ++ GY E + Sbjct: 612 IADHRRKQMVLRESEARFRATFEQAAVGIAHLDPDGHWLRVNHKLCDIVGYPPDELLTLS 671 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 + + + AD R L + E + +TGE +WI ++S V D+ Sbjct: 672 FQDITHPDDLRADLRQMEALLAGQIDTYTIEKRYIRKTGESLWINLTVSLVRDIHNAPAY 731 Query: 241 LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICR---NIESVLNESHVSLFALR 297 + +I ++ A +S + ++ + + + Sbjct: 732 FISVVENIQSRKEAELQLLLASAVFSNSMEGIFVTDLKGSILAVNPAFSQITLYEAAEVL 791 Query: 298 NGMPIHWASSS--------HGAEIQNAQSWSATI--RQRDGAPAGIL---QIKTSSGAET 344 S ++ SW I R+RDG + E Sbjct: 792 GRNARILQSGRQNREFYVALWQDVLTIGSWRGEIWNRRRDGEVFPEWLSISSVRNHQGEV 851 Query: 345 SAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP 404 + +I +D+S+ + S L DP+TGLPNR L + LD +++A Sbjct: 852 TNYIGIFSDLSRI--------KHSEAKFHHLAHHDPLTGLPNRLLLRSRLDHAIERARRT 903 Query: 405 ----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFV-LVS 459 V + +D + + DSLG+ D L + R L L R+ G +FV ++ Sbjct: 904 GGRCAVLFLDLDRFKMINDSLGHRAGDTLLRTLGARLTACLGDTGTLARLGGDEFVAVIE 963 Query: 460 LENDVSNITQIADELRNVVSKPIMI-DDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAM 516 + + + IA + + +P + + + S+GIS G N D LL A A+ Sbjct: 964 DIDGIPAVGTIALTMLERLREPCRLSEGPEVCIGGSVGISLFPEDGDNPDTLLQHADTAL 1023 Query: 517 DYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIE 576 ++ GG + F++ + E + RL L A L+ A+ L YQP I TGE+ G+E Sbjct: 1024 GQVKGAGGGAYGFYTRTLTERISARLGLEAGLRHALEQGDFLLHYQPLIALGTGEVEGVE 1083 Query: 577 ALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNL 636 AL RW +PP RFIPLAE+ G I +G WV+ EACR + WRSQ + + L+VNL Sbjct: 1084 ALVRWAGGDGLLIPPDRFIPLAEDTGLIVPLGEWVLGEACRTMQRWRSQGMPLTVLAVNL 1143 Query: 637 SALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSV 696 S FR + +P V + G+ L +EITES +ME ++ L+ +GV L++ Sbjct: 1144 SPRQFRDHAIPALVRRVLEQTGLPASVLELEITESAIMEQGAAAEAQMTGLKHLGVRLAI 1203 Query: 697 DDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGV 756 DDFGTG+S L+ L P+ +IKID+SFV + + I ++G++L L V+AEGV Sbjct: 1204 DDFGTGYSSLANLRRFPIDKIKIDQSFVRDIPRDAAAEEITATIIAMGRTLKLHVLAEGV 1263 Query: 757 ETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 ET +Q + L + C QGY FSRP+ A + W++ Sbjct: 1264 ETTDQLDFLSRKQCDSAQGYLFSRPITAAALEKWLA 1299 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 93/260 (35%), Gaps = 6/260 (2%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 ++ F EQ +G ++ + + N + GY +E++ + + D Sbjct: 622 LRESEARFRATFEQAAVGIAHLDPDGHWLRVNHKLCDIVGYPPDELLTLSFQDITHPDDL 681 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA--EGKVYYLALVRD 124 A + G +++ + E + +K G +W +S V Y++++V + Sbjct: 682 RADLRQMEALLAG---QIDTYTIEKRYIRKTGESLWINLTVSLVRDIHNAPAYFISVVEN 738 Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 + Q + + V D + I+ N AF+++ Y +E G + Sbjct: 739 IQSRKEAELQLLLASAVFSNSMEGIFVTDLKGSILAVNPAFSQITLYEAAEVLGRNA-RI 797 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 L + + L Q + + E R GE SIS V + + N + Sbjct: 798 LQSGRQNREFYVALWQDVLTIGSWRGEIWNRRRDGEVFPEWLSISSVRNHQGEVTNYIGI 857 Query: 245 FSDITEERQIRQLEGNILAA 264 FSD++ + ++ Sbjct: 858 FSDLSRIKHSEAKFHHLAHH 877 Score = 45.0 bits (106), Expect = 0.013, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 38/127 (29%), Gaps = 14/127 (11%) Query: 138 LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN--IPEFPADNR 195 L P ++LD + I N A+ + E G + + ++ Sbjct: 28 FEAIFRALPGPHLILDADLKIAAVNDAYLQATLTRRGEILGRGIFEVFPDNPNDPVSEGV 87 Query: 196 IRLQQLLWKTARDQDE-------FLLLTRTGEKIWIKAS-----ISPVYDVLAHLQNLVM 243 L+ L + + + + + G + +PV + +V Sbjct: 88 RNLRASLLRVLSSRTQDVMSIQKYDVRKPGGGAGDFELRYWSPINTPVLGADGAVVYIVH 147 Query: 244 TFSDITE 250 D+TE Sbjct: 148 YAQDLTE 154 Score = 44.2 bits (104), Expect = 0.021, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 50/138 (36%), Gaps = 15/138 (10%) Query: 5 DADNAAD--GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 A+ + F ++++ + ++ N A + +R E++G I + P Sbjct: 17 QAERHPEGGADFEAIFRALPGPHLILDADLKIAAVNDAYLQATLTRRGEILGRGIFEVFP 76 Query: 63 RDLRPAHPEYIRHNREGGKARV-----EGMSRELQLEKKDGS-------KIWTRFALSKV 110 + E +R+ R + + MS + +K G + W+ + Sbjct: 77 DNPNDPVSEGVRNLRASLLRVLSSRTQDVMSIQKYDVRKPGGGAGDFELRYWSPINTPVL 136 Query: 111 SAEGKVYYLA-LVRDASV 127 A+G V Y+ +D + Sbjct: 137 GADGAVVYIVHYAQDLTE 154 >UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Shewanella RepID=A6WKV6_SHEB8 Length = 921 Score = 786 bits (2031), Expect = 0.0, Method: Composition-based stats. Identities = 181/679 (26%), Positives = 308/679 (45%), Gaps = 32/679 (4%) Query: 138 LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIR 197 L +D + + + + CNR+ + + SE G L Sbjct: 251 LQTFIDSFEEHIWMKNVAGIYTLCNRSVEKAWEMPRSEIVGKSDVELFGAEIANIFLEGD 310 Query: 198 LQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQL 257 + E L +W++ P + ++ +I++ +++ + Sbjct: 311 RLAIESGMPIIVAECLDGNEAKNHLWLETLKLPTLNPQGEFVGVIGMTRNISKHKEVEEQ 370 Query: 258 EGNILAAMCSSPPFHEMGEIIC---RNIESVLNESHVSLFALRNGMPIHWASSSH----- 309 +S + + + + L P ++S H Sbjct: 371 LTLATNVFKNSVEGVVVTDRHGNITDVNGAFFEITGYVREELLGQNPRIFSSGRHDKAFF 430 Query: 310 ---GAEIQNAQSWSATI--RQRDGAPAG---ILQIKTSSGAETSAFIERVADISQHMAAL 361 + W+ I R+++G + + F+ ADIS Sbjct: 431 DKLWNALLANGKWNGEIWNRRKNGTIFPQNITISTIYDEVGDVRYFVAVFADISA----- 485 Query: 362 ALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDV 417 Q+++ + L FDP+T LPNR L V +A +I VD + + Sbjct: 486 ---QKENEAQLTHLAYFDPLTHLPNRMKFMMQLKQEVRQAKRLNLQLATVMIDVDLFKHI 542 Query: 418 IDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFV-LVSLENDVSNITQIADELRN 476 DS G++ D+ L+E+ R R ++ L RI G +FV L+S ++ + T ++LR Sbjct: 543 NDSFGHSIGDEMLVELAKRLRSQVGDQDVLSRIGGDEFVALISGIDNNEDATVAINQLRQ 602 Query: 477 VVSKPIMID-DKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPA 533 V +P ++ LT S+G+S G + D LL A AM + +G N + F++ + Sbjct: 603 VFEQPFIVSTGDHLRLTASMGVSLYPNDGTDADTLLRNADAAMYRAKNDGRNNYAFYTES 662 Query: 534 MNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSR 593 + + E L L +AL AI N L L+YQP++ + + G EAL RWHDP G + P+ Sbjct: 663 LTQQSFEHLKLQSALYGAIEQNALYLMYQPKLDLVSRKTVGFEALLRWHDPQLGLISPAV 722 Query: 594 FIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDA 653 FIP+AE+IG I IG WV+ ACRQ W + H ++VN++ + + + V Sbjct: 723 FIPVAEKIGLIHEIGLWVLETACRQGMRWLREGKHFGRIAVNVAGQQLQRSSFVDDVKRV 782 Query: 654 MHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLP 713 + G+ L +E+TES+MM++ + ++ L D+G+ LSVDDFGTG+S L+ L LP Sbjct: 783 LAETGLPAKHLELEVTESVMMQNPDLAIRDLKRLGDLGIELSVDDFGTGYSSLNYLKKLP 842 Query: 714 VTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVI 773 + ++KID+SFV + A+ +A+ ++G +L L ++AEGVETKEQ + L++ C Sbjct: 843 IHKLKIDQSFVRDIPFDTNNTAIAKAVIALGHALKLDIIAEGVETKEQADFLQQNQCDQA 902 Query: 774 QGYFFSRPLPAEEIPGWMS 792 QGY FSRP E++ ++S Sbjct: 903 QGYLFSRPQLPEDLDAFLS 921 Score = 158 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 90/253 (35%), Gaps = 14/253 (5%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 ++ + N N + EK W R E++G + L ++ E Sbjct: 251 LQTFIDSFEEHIWMKNVAGIYTLCNRSVEKAWEMPRSEIVGKSDVELFGAEIANIFLEGD 310 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSK----IWTR-FALSKVSAEGK-VYYLALVRDASV 127 R E G + E DG++ +W L ++ +G+ V + + R+ S Sbjct: 311 RLAIESGMPI-------IVAECLDGNEAKNHLWLETLKLPTLNPQGEFVGVIGMTRNISK 363 Query: 128 EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI 187 +EQ + V+V D +I N AF E+ GY E G P + + Sbjct: 364 HKEVEEQLTLATNVFKNSVEGVVVTDRHGNITDVNGAFFEITGYVREELLGQNP-RIFSS 422 Query: 188 PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSD 247 +L L + E + G +IS +YD + ++ V F+D Sbjct: 423 GRHDKAFFDKLWNALLANGKWNGEIWNRRKNGTIFPQNITISTIYDEVGDVRYFVAVFAD 482 Query: 248 ITEERQIRQLEGN 260 I+ +++ + Sbjct: 483 ISAQKENEAQLTH 495 >UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=23 Tax=Pseudomonas RepID=A4Y0E0_PSEMY Length = 766 Score = 786 bits (2031), Expect = 0.0, Method: Composition-based stats. Identities = 179/698 (25%), Positives = 309/698 (44%), Gaps = 39/698 (5%) Query: 116 VYYLALVRDASVEMAQKEQT----RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY 171 + YL L R A + Q +L +A+D + D V + ++ + G Sbjct: 57 LLYLVLHRHAQQYRRARLQLTSNEERLRLALDATRDGLWDWDFAAQRVFFSPSYAALLGL 116 Query: 172 CISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDE--FLLLTRTGEKIWIKASIS 229 P D LQ L D + + L G W + Sbjct: 117 TPQAL--GDTRDAWAERLHPEDRERVLQALALDQQYDSYDNVYRLRHADGTYRWFHSRGR 174 Query: 230 PVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE------IICRNIE 283 + D Q + SDIT++R + A ++ + + + Sbjct: 175 LLRDEGGRPQRFIGIASDITQQRANDESLRQAAAVFDATQEGVLVTDPEQRIVHVNPAFS 234 Query: 284 SVLNESHVSLFALR-----NGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQ- 335 + S + +G S + N +WS + R++ G Q Sbjct: 235 RITGYSAEEVLGQHPTLLKSGRHDAAFYQSLWQALHNRDAWSGEVWNRRKSGEIYPQWQC 294 Query: 336 --IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNY 393 + S ++ +DI+ ++S++ ++ L DP++ LPNR Sbjct: 295 IRVIHDEHGRISHYVAVFSDITA--------LKRSQRELDYLAHHDPLSNLPNRLLFTER 346 Query: 394 LDDLVDKAV----SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCR 449 + ++++ V LI +DH + + +SLG+ D L V R ++ L L R Sbjct: 347 IAHALERSKSEQLRGAVLLIDLDHFKHINESLGHNVGDLLLKSVGERLQQDLPGGCTLAR 406 Query: 450 IEGTQFVLVSLEN-DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRD 506 + G +F L+S D ++A L + P +D+ + SIGIS + + Sbjct: 407 LGGDEFGLLSETCADAPQAAELAQNLLRCLEAPFRLDEHELYIGASIGISLFPDDADSVE 466 Query: 507 YLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIF 566 +L A +A+ + +G G+ F+ + + ++R+ L ++L+ A+ N++L++ YQP Sbjct: 467 QVLRNADSALFKAKSSGREGYAFYVQELTDYARQRVELASSLRHALDNHELRVFYQPLHD 526 Query: 567 AETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN 626 E G G+EAL RW P G +PP+ FIP+AE+ G I I WV+ +AC Q+ W ++ Sbjct: 527 LENGNPVGMEALVRWQHPQRGLIPPAEFIPIAEDNGMIGPIDAWVLEQACGQMMRWNAEG 586 Query: 627 IHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQI 686 + ++VN+S+ F +L +V+ + G+ QL +E+TES +ME + Sbjct: 587 SALRFVAVNVSSRLFSRGELDLKVAQVLAETGLSPQQLELEVTESAIMEDPDAALSLLTR 646 Query: 687 LRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQS 746 LR +GV L++DDFGTG+S L+RL LPV ++K+D+SFV + A+ A+ ++G S Sbjct: 647 LRALGVRLAIDDFGTGYSSLARLKRLPVDKLKLDQSFVRGLPDDIEDAAIARAVIALGHS 706 Query: 747 LNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPA 784 L L V+AEG+E+ Q + LR + C QGY F RP P Sbjct: 707 LGLNVLAEGIESPAQVDFLRALGCDYGQGYHFGRPAPV 744 Score = 192 bits (489), Expect = 5e-47, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 93/254 (36%), Gaps = 6/254 (2%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 + + AL+ G + + +FF+P+ L G + +G+ L Sbjct: 76 LTSNEERLRLALDATRDGLWDWDFAAQRVFFSPSYAALLGLTP-QALGDT-RDAWAERLH 133 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRD 124 P E + + + +L DG+ W + EG ++ + D Sbjct: 134 PEDRERVLQAL-ALDQQYDSYDNVYRLRHADGTYRWFHSRGRLLRDEGGRPQRFIGIASD 192 Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 + + A E RQ D V+V DPE+ IV N AF+ + GY E G P TL Sbjct: 193 ITQQRANDESLRQAAAVFDATQEGVLVTDPEQRIVHVNPAFSRITGYSAEEVLGQHP-TL 251 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 L A L Q L E ++GE I ++D + + V Sbjct: 252 LKSGRHDAAFYQSLWQALHNRDAWSGEVWNRRKSGEIYPQWQCIRVIHDEHGRISHYVAV 311 Query: 245 FSDITEERQIRQLE 258 FSDIT ++ ++ Sbjct: 312 FSDITALKRSQREL 325 >UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BHU8_9GAMM Length = 892 Score = 784 bits (2027), Expect = 0.0, Method: Composition-based stats. Identities = 175/691 (25%), Positives = 308/691 (44%), Gaps = 39/691 (5%) Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 E +L + + +D E + C+ + + E G Sbjct: 200 RESERTSNHARHRLEATFSAIPDLLFEMDIEGRYLACHASDPDDLVAKPEELIGKSVFDF 259 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 + + E + L ++ + L + R + S+S +D + + ++ Sbjct: 260 IPLDEAQIIVEAIREADLKGISKGRQVTLQVGR--GLREFELSVSRKHDDESSEHHFIVL 317 Query: 245 FSDITEERQIRQLEGNILAAMC--SSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPI 302 DITE ++ + A + I R + + P Sbjct: 318 SRDITERKRHERELHIAATAFDSQEGMLITDAEHRILRVNNAFTRVTGYEAEEAIGNTPA 377 Query: 303 HWASSSHGAEIQNAQ--------SWSATI--RQRDGAPAG---ILQIKTSSGAETSAFIE 349 S H + W + +++ G + +S E + ++ Sbjct: 378 FLQSGKHSEDFYQTMMESLSKNNYWQGEVWNQRKSGEIYPQHLTITAVQTSAGEITNYVG 437 Query: 350 RVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PV 405 DI+Q +++ I QL +D +TGLPNR +L LD + Sbjct: 438 AFTDITQ--------RKQDEADIHQLAFYDSLTGLPNRRSLQERLDSALSSCRHTRQLGA 489 Query: 406 VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVS 465 V+ I +D+ +++ D+ G+ D+ L+EV NR ++ + R+ G +F+++ V Sbjct: 490 VFFIDLDNFKNLNDTAGHDQGDKLLVEVANRLNSCVRNADMVARLGGDEFIVILENLGVD 549 Query: 466 NITQIAD------ELRNVVSKPIMIDDKPFPLTLSIGISYDLGKNR-DYLLSTAHNAMDY 518 +A ++ + P+ I + + T SIGI+ K+ D ++ + AM Sbjct: 550 ESNVLAQVKDIVAKVILTIQAPLTIGTQAYHPTCSIGIALFSEKDFSDEVMKRSDMAMYQ 609 Query: 519 IRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEAL 578 + +G N ++FF P E + + A L+ A+SN QL+L YQPQ +T L G EAL Sbjct: 610 AKSSGKNTYRFFDPVAEEALCSLARMDADLRFALSNQQLELHYQPQYRCQT--LIGAEAL 667 Query: 579 ARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN-IHIPALSVNLS 637 RW P G V P+ FIPLAE+ G I IG WVI +AC+QL +W+ + ++VN+S Sbjct: 668 LRWKHPDRGMVSPAEFIPLAEDTGLILPIGEWVIRQACKQLQQWQERPETAELFIAVNVS 727 Query: 638 ALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVD 697 A F + V ++ +G+ +L +E+TES+++ + +++Q LR G+ ++D Sbjct: 728 ARQFCQDNFVESVRQLLNTYGVSAEKLKLELTESLVLMDVEDTIQKMQALRSYGIRFALD 787 Query: 698 DFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVE 757 DFGTG+S LS L LP+ +IKID+SF+ ++ +++AI ++GQ+L L V+AEGVE Sbjct: 788 DFGTGYSSLSHLKRLPLDQIKIDRSFIRDVPEDQDDSEIVQAIIAMGQNLGLNVLAEGVE 847 Query: 758 TKEQFEMLRKIHCRVIQGYFFSRPLPAEEIP 788 T EQ L ++ C IQG+ RP ++ Sbjct: 848 TDEQLAFLTELDCLDIQGFLLGRPSSIDKFE 878 Score = 170 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 93/267 (34%), Gaps = 14/267 (5%) Query: 2 KLTDADNAADG-------IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIG 54 K A ++ ++ + + + K EE+IG Sbjct: 194 KAEAALRESERTSNHARHRLEATFSAIPDLLFEMDIEGRYLACHASDPDDLVAKPEELIG 253 Query: 55 NNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSREL-QLEKKDGSKIWTRFALSKVSAE 113 ++ IP D E IR G ++ ++ ++ + + + + Sbjct: 254 KSVFDFIPLDEAQIIVEAIREADLKGISKGRQVTLQVGRGLR----EFELSVSRKHDDES 309 Query: 114 GKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCI 173 + +++ L RD + + + A D +++ D E I++ N AFT + GY Sbjct: 310 SEHHFIVLSRDITERKRHERELHIAATAFD-SQEGMLITDAEHRILRVNNAFTRVTGYEA 368 Query: 174 SEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYD 233 EA G P L + D + + L K Q E ++GE +I+ V Sbjct: 369 EEAIGNTP-AFLQSGKHSEDFYQTMMESLSKNNYWQGEVWNQRKSGEIYPQHLTITAVQT 427 Query: 234 VLAHLQNLVMTFSDITEERQIRQLEGN 260 + N V F+DIT+ +Q Sbjct: 428 SAGEITNYVGAFTDITQRKQDEADIHQ 454 Score = 99.3 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 46/140 (32%), Gaps = 7/140 (5%) Query: 2 KLTDADN-AADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 +T+ + + G ++ + ++ N A ++ GY+ EE IGN L Sbjct: 320 DITERKRHERELHIAATAFDSQEGMLITDAEHRILRVNNAFTRVTGYEAEEAIGNTPAFL 379 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYY 118 H E ++ E+ ++K G ++ V SA Y Sbjct: 380 QSG----KHSEDFYQTMMESLSKNNYWQGEVWNQRKSGEIYPQHLTITAVQTSAGEITNY 435 Query: 119 LALVRDASVEMAQKEQTRQL 138 + D + + QL Sbjct: 436 VGAFTDITQRKQDEADIHQL 455 >UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=C6XEG9_METSD Length = 718 Score = 784 bits (2026), Expect = 0.0, Method: Composition-based stats. Identities = 182/697 (26%), Positives = 319/697 (45%), Gaps = 41/697 (5%) Query: 131 QKEQTRQLIIAVDHLDRPVI--VLDPERHIVQCNRAFTEMFGYCISEAS--GMQPDTLLN 186 + + L + +++ ++D ++ + ++ GY E G L Sbjct: 26 LQHREHILDSLLKNMEGMAYCCLVDAHWTMLFISDGCFDLTGYRPDELLHNGCTSFEELT 85 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 +PE A R + L + R + E+ ++T G+ W+ + +++ ++ L Sbjct: 86 LPEDRARIRNTVDDALSRRERFEIEYRIMTIDGQIRWVNERGTGIFNPQGQVEALEGFIQ 145 Query: 247 DITEERQIRQLE----GNILAAMCSSPPFHE----MGEIICRNIE--SVLNE-SHVSLFA 295 DIT+ + Q +S G+ I N + S L Sbjct: 146 DITQRKLNEQALQEAERRYRNIFENSIEGIFQTSQDGQYINANPALARIYGYESPEELIQ 205 Query: 296 LRNGMPIHWASSSHGAEIQ--------NAQSWSATIRQRDGAPAGILQ---IKTSSGAET 344 N + + ++ + I +RDG+ I + + + Sbjct: 206 SLNNIAQQLYVQPESRQAFLTLMQLEDRVVNFESQIYRRDGSTIWISENARAVRNDAGKL 265 Query: 345 SAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS- 403 F V DI+ E++ IE D +TGLPNR + + L + A Sbjct: 266 LYFEGTVEDIT--------ERKSYNALIEYQATHDDLTGLPNRTLMQDRLLQAISYADRT 317 Query: 404 ---PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL 460 V + +D +D+ DS+G+ DQ L+ + R ++ + R G +FVL+ Sbjct: 318 ASKLAVVFVDLDKFKDINDSMGHFIGDQLLIAMARRLESCIRDSDTVARPGGDEFVLLLS 377 Query: 461 ENDVSNI-TQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMD 517 + +Q + + S+P I+ K F +T SIGIS D GK + LL A AM Sbjct: 378 NIHGMDALSQTLQRVLALTSEPCSIEGKDFTVTSSIGISLYPDDGKTSETLLKNADTAMY 437 Query: 518 YIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEA 577 ++ G N +QF++ +N ++ ERL + ++ A+ +N+ L YQP++ T + G+EA Sbjct: 438 KAKQEGKNNFQFYTRELNSILVERLEMEYQMRNALGHNEFHLHYQPKLNLRTQRITGVEA 497 Query: 578 LARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLS 637 L RWH+P G + P+RFIP+AEE IE IG WV+ +AC + + + +SVN+S Sbjct: 498 LIRWHNPRQGLISPNRFIPIAEESSLIEQIGSWVLEKACMESIALSQLSGYDVPVSVNVS 557 Query: 638 ALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVD 697 F+ + L +S + G+ L +EITE + + + K + L+ +G+ L++D Sbjct: 558 PRQFQQSNLVGNISRVLQETGLKPSLLELEITEGTLADTSPQFIKVLNDLKGLGIKLAID 617 Query: 698 DFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVE 757 DFGTG+S L L P+ +KID+SFV ++ A+L+AI ++G +L + +VAEGVE Sbjct: 618 DFGTGYSSLGYLKHFPIDNLKIDRSFVMGLESDTANQAILKAIVALGHNLGINLVAEGVE 677 Query: 758 TKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 T+ Q + L I C +QG+ FS+PLP ++ + + Sbjct: 678 TERQRDFLLSIGCDEMQGFLFSQPLPFDQAGKLLLAQ 714 Score = 148 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 28/312 (8%) Query: 7 DNAADGIFFPALEQNMMGAV---LINENDEVMFFNPAAEKLWGYKREEVIG---NNIDML 60 + I L+ G L++ + ++F + L GY+ +E++ + + L Sbjct: 26 LQHREHILDSLLKNM-EGMAYCCLVDAHWTMLFISDGCFDLTGYRPDELLHNGCTSFEEL 84 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYY 118 + R IR+ + +R E E ++ DG W + + Sbjct: 85 TLPEDR----ARIRNTVDDALSRRERFEIEYRIMTIDGQIRWVNERGTGIFNPQGQVEAL 140 Query: 119 LALVRDASVEM----AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCIS 174 ++D + A +E R+ ++ + + + N A ++GY Sbjct: 141 EGFIQDITQRKLNEQALQEAERRYRNIFENSIEGIFQTSQDGQYINANPALARIYGYESP 200 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLLW-KTARDQDEFLLLTRTGEKIWIKASISPVYD 233 E + + ++R L+ + E + R G IWI + V + Sbjct: 201 EELIQSLNNIAQQLYVQPESRQAFLTLMQLEDRVVNFESQIYRRDGSTIWISENARAVRN 260 Query: 234 VLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSL 293 L T DITE + L ++ +++ + + Sbjct: 261 DAGKLLYFEGTVEDITERKSYNALIEYQATH----------DDLTGLPNRTLMQDRLLQA 310 Query: 294 FALRNGMPIHWA 305 + + A Sbjct: 311 ISYADRTASKLA 322 Score = 92.7 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 60/156 (38%), Gaps = 8/156 (5%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGY-KREEVIGNNIDMLIP 62 A A+ + E ++ G +++ + + NPA +++GY EE+I +++ + Sbjct: 154 EQALQEAERRYRNIFENSIEGIFQTSQDGQYINANPALARIYGYESPEELI-QSLNNIAQ 212 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLA 120 + PE + + ++ E Q+ ++DGS IW V + +Y+ Sbjct: 213 QLYVQ--PESRQAFLTLMQLEDRVVNFESQIYRRDGSTIWISENARAVRNDAGKLLYFEG 270 Query: 121 LVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDP 154 V D + + + L ++ D Sbjct: 271 TVEDITERKSYNALIEYQATHDDLTGLPNRTLMQDR 306 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 784 bits (2026), Expect = 0.0, Method: Composition-based stats. Identities = 181/697 (25%), Positives = 291/697 (41%), Gaps = 36/697 (5%) Query: 115 KVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEM-FGYCI 173 + + D +A Q V+ + I+LD + + R + G Sbjct: 186 RAAEMWERLDQLAIVALTLPPAQRERVVNLIAHGRIILDRKPVLDTITRDILALPTGARA 245 Query: 174 SEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRT------GEKIWIKAS 227 D + + R+ L + A +L + G ++ Sbjct: 246 ESVIHAYVDGYQHATDRAHTYRVLLFVVALGLAGYLMIAILRLQRTSLALAGANEHLEER 305 Query: 228 ISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLN 287 I + + L F++ +E I + I+A + +IE + Sbjct: 306 IQTLRLTESELHLYANVFTNASEGMAITDAQARIVAVNPAFTDIT------GYSIEEIHG 359 Query: 288 ESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGIL---QIKTSSGA 342 + L +G A + W I R+R G T Sbjct: 360 RTPA---VLASGRQDAAFYREMWATLGKRGQWQGEIWNRRRSGEIYPEWLSITAITEGDG 416 Query: 343 ETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV 402 S +I +DI+ ++++S I L D +TGLPNR L + L + KA Sbjct: 417 GVSHYIGIFSDIT--------DRKESEARIRHLAHHDALTGLPNRLLLQDRLGQAILKAR 468 Query: 403 S----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV 458 V + +D + + D+LG+ D L +V R ++ + R G +FV+V Sbjct: 469 RNSTQAAVLFLDLDRFKTINDTLGHEIGDGLLRQVTQRCLGAVRETDTVARQGGDEFVIV 528 Query: 459 SLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNA 515 + + IA ++ +++P + +T SIGI+ G + LL A A Sbjct: 529 LPDLEHGQDAGTIARKILAALTEPCRLGPHELTVTGSIGIALYPGDGADPSMLLRNADAA 588 Query: 516 MDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGI 575 M + +G NG+QF++ MN L+L L+ A+ N+L+L +QP++ A G + G Sbjct: 589 MYRAKADGRNGFQFYAADMNTHSLGELLLEHQLRGALDRNELRLYFQPKVNAADGCIEGC 648 Query: 576 EALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVN 635 EAL RW P G + P RF+P AEE G I IG WV+ EACRQL W + ++VN Sbjct: 649 EALLRWQHPDLGLLAPGRFVPAAEESGLIVPIGEWVLREACRQLRAWIDAGLAPVPVAVN 708 Query: 636 LSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLS 695 LS F + V +A+ + L +E+TE+M+M + LR MGV L+ Sbjct: 709 LSGQQFAHQDIVALVREALAEHRLPAPMLELELTETMLMRDLERTIATLAELRAMGVTLA 768 Query: 696 VDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEG 755 +DDFGTG+S L+ L V +KID+SFV + A+ ++ +L LTV AEG Sbjct: 769 IDDFGTGYSSLAYLRQFDVNALKIDRSFVHDIRPGSSDGKIATAVIALAHNLGLTVTAEG 828 Query: 756 VETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 VET Q L + C +QG+ F +P PAE ++ Sbjct: 829 VETAAQQHFLARHGCDQLQGFLFGQPEPAEAFAQRLA 865 Score = 123 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 57/324 (17%), Positives = 101/324 (31%), Gaps = 22/324 (6%) Query: 45 WGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTR 104 G + E VI +D R + G A G + Sbjct: 241 TGARAESVIHAYVDGYQHATDRAHTYRVLLFVVALGLA---------------GYLMIAI 285 Query: 105 FALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRA 164 L + S L + + + + + D + IV N A Sbjct: 286 LRLQRTSLALAGANEHLEERIQTLRLTESELHLYANVFTNASEGMAITDAQARIVAVNPA 345 Query: 165 FTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWI 224 FT++ GY I E G P +L A + L K + Q E R+GE Sbjct: 346 FTDITGYSIEEIHGRTP-AVLASGRQDAAFYREMWATLGKRGQWQGEIWNRRRSGEIYPE 404 Query: 225 KASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGN--ILAAMCSSPPFHEMGEIICRNI 282 SI+ + + + + + FSDIT+ ++ + A+ P + + + + I Sbjct: 405 WLSITAITEGDGGVSHYIGIFSDITDRKESEARIRHLAHHDALTGLPNRLLLQDRLGQAI 464 Query: 283 ESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGA 342 S + + + + G EI + T R GA + G Sbjct: 465 LKARRNSTQAAVLFLDLDRFKTINDTLGHEIGDGLLRQVTQRCL-GAVRETDTVARQGGD 523 Query: 343 ETSAFIERVADISQHMAALALEQE 366 E F+ + D+ A + ++ Sbjct: 524 E---FVIVLPDLEHGQDAGTIARK 544 Score = 115 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 53/161 (32%), Gaps = 9/161 (5%) Query: 4 TDADNAADGIFFP-ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 T ++ + G + + ++ NPA + GY EE+ G +L Sbjct: 308 TLRLTESELHLYANVFTNASEGMAITDAQARIVAVNPAFTDITGYSIEEIHGRTPAVLAS 367 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS--AEGKVYYLA 120 A + + E+ ++ G +++ ++ G +Y+ Sbjct: 368 GRQDAAFYREMWATL----GKRGQWQGEIWNRRRSGEIYPEWLSITAITEGDGGVSHYIG 423 Query: 121 LVRDASVEMAQKEQTRQL--IIAVDHLDRPVIVLDPERHIV 159 + D + + + R L A+ L +++ D + Sbjct: 424 IFSDITDRKESEARIRHLAHHDALTGLPNRLLLQDRLGQAI 464 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 784 bits (2025), Expect = 0.0, Method: Composition-based stats. Identities = 163/530 (30%), Positives = 266/530 (50%), Gaps = 20/530 (3%) Query: 273 EMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAG 332 EI+ ++E +L + ++ + I + A + + + R+G+ Sbjct: 386 RAAEIVGYSVEEMLLTTIETIIHPDHLQMIIERKAKTDAGEFVPKQFEIMLAHRNGSCVP 445 Query: 333 ILQIKTS---SGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNN 389 + G + + V DI+ +++K+ I+QL +D +TGLPNR+ Sbjct: 446 VEVTTARTIWQGKQVE--LAIVRDIT--------DRKKAEDEIQQLAYYDTLTGLPNRSL 495 Query: 390 LHNYLDDLVDKA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQ 445 L + L + +A + + +D + + D+LG+ D L V R E ++ Sbjct: 496 LQDRLGQGIVQAVRDNRKVAIMFLDLDRFKSINDTLGHVAGDSLLATVAERLTECVRETD 555 Query: 446 YLCRIEGTQFVLVSL-ENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LG 502 + RI G +FV++ ++ +IA+++ +SKP++++D+ +T SIGI+ G Sbjct: 556 TVARIGGDEFVIIISAIEHAEDLNKIAEKILAAISKPLVLNDQEIFITASIGIAIYPEDG 615 Query: 503 KNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQ 562 + LL A AM + G N +Q+FS MN E L+L +L+ A+ N+ + YQ Sbjct: 616 TDVQGLLKNADLAMYKAKDQGKNAFQYFSREMNVQALEHLILENSLRRALERNEFVIFYQ 675 Query: 563 PQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEW 622 PQ+ ++G L G+EAL RW P G +PPSRFIP+AEE G I IG W + AC + W Sbjct: 676 PQMDLKSGRLVGMEALIRWQHPDLGLLPPSRFIPMAEETGLILPIGEWALQTACAKNRAW 735 Query: 623 RSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFK 682 ++VNL + FR + + + G+ QL +E+TESM+M E Sbjct: 736 MDAGFMPLRVAVNLCGIQFRQKKFIELIEAVLKKTGLAPSQLELELTESMLMSKAEESTT 795 Query: 683 RIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITS 742 + L++MGV L++DDFGTG+S LS L + P+ +KID+SF+ A++ AI + Sbjct: 796 VLHKLKEMGVSLAIDDFGTGYSSLSYLKNFPINRVKIDRSFIRDVPNNPDDTAIVSAIIA 855 Query: 743 IGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 + +LNL V AEGVE Q E L +C IQGY S PLP E ++ Sbjct: 856 MAHNLNLKVTAEGVENHSQLEFLSTRNCNEIQGYLLSSPLPEAEFTRFLR 905 Score = 103 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 69/174 (39%), Gaps = 9/174 (5%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + +A ++ F + G +I ++ + + N A ++ GY EE++ I+ +I Sbjct: 348 QHQNALRESESNFRALADNANDGLQIITDSSHLAYVNKRAAEIVGYSVEEMLLTTIETII 407 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLAL 121 D I + E+ L ++GS + ++ +GK LA+ Sbjct: 408 HPDHLQMI---IERKAKTDAGEFVPKQFEIMLAHRNGSCVPVEVTTARTIWQGKQVELAI 464 Query: 122 VRDASVEMAQKEQTRQL--IIAVDHLDRPVIVLDPERH-IVQC---NRAFTEMF 169 VRD + +++ +QL + L ++ D IVQ NR MF Sbjct: 465 VRDITDRKKAEDEIQQLAYYDTLTGLPNRSLLQDRLGQGIVQAVRDNRKVAIMF 518 Score = 82.3 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 50/140 (35%), Gaps = 2/140 (1%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 ++ + A +E D+ + + ++ H+ N+ E+ GY + E Sbjct: 343 ILSLDQHQNALRESESNFRALADNANDGLQIITDSSHLAYVNKRAAEIVGYSVEEMLLTT 402 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 +T+++ + + + Q E +L R G + ++ + + + Q Sbjct: 403 IETIIHPDHLQMIIERKAKTDAGEFVPKQFEIMLAHRNGSCVPVEVTTA--RTIWQGKQV 460 Query: 241 LVMTFSDITEERQIRQLEGN 260 + DIT+ ++ Sbjct: 461 ELAIVRDITDRKKAEDEIQQ 480 >UniRef50_Q5ZZI1 Sensory box (GGDEF/EAL domain) regulatory protein n=4 Tax=Legionella pneumophila RepID=Q5ZZI1_LEGPH Length = 985 Score = 783 bits (2024), Expect = 0.0, Method: Composition-based stats. Identities = 176/814 (21%), Positives = 344/814 (42%), Gaps = 46/814 (5%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP 67 + + LE+ + NE + + NPA E + Y E + + L+ P Sbjct: 185 KKREKLLTTILEKAGDSVEITNEEAVIQYVNPAFENITLYNAREAMNKTVASLL---RSP 241 Query: 68 AHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEG---KVYYLALVRD 124 + +++ KKDGS + + V + ++A+ +D Sbjct: 242 VEDAQLFEEINQTLKSGNTWKGQIRSRKKDGSYWVAQTIIVPVMDDELGRITQHIAIKQD 301 Query: 125 ASVEM----AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 + ++ K + ++ + + + + + ++ N A Y E Sbjct: 302 ITEQVHRFNQLKISEERYRNLMNAVADGIFIHNLQGAFLEVNEAACLSLNYSREELINSY 361 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 + F ++ +L + + K E + + G + + V++ + Sbjct: 362 VWDI--EVGFSQESLNQLWENVQKG-PINTEGMHRRKDGTTFPVDVRL-AVFNATGE-KL 416 Query: 241 LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNESHVSLF 294 ++ DIT +++ + A+ SP + + + + L Sbjct: 417 VLAIVRDITLQKRSEATIRKLTRALEQSPVLVIITDKTGTIEYVNAKVIEQTGYRKEELV 476 Query: 295 A-----LRNGMPIHWASSSHGAEIQNAQSWSATIRQRD--GAPAGILQIK---TSSGAET 344 LR+G H + + N + W + ++ G + I + E Sbjct: 477 GGNTRILRSGQTPHEIYKTMWEHLANGEEWHGELLNKNKSGEHFWVSAIISPIRNDNEEI 536 Query: 345 SAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA--- 401 + ++ + D++Q ++ + ++ FD +T LPNR N L+ + K+ Sbjct: 537 THYLAVMEDVTQ--------KKSYEEMLKHQATFDNLTNLPNRLYAVNKLERAISKSHIN 588 Query: 402 -VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL 460 V + +D + + DSLG+A D L + RF ++ + R+ G +F+++ Sbjct: 589 NQKLAVLFLDLDEFKQINDSLGHAIGDLLLKALSERFLSMIRQTDTIARLGGDEFMMILE 648 Query: 461 -ENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMD 517 + IA + R + S+P +I+ + ++ SIGI+ GK+ L+ A AM Sbjct: 649 NIMQDKDAESIAKKCREICSQPFVIESQELLVSTSIGIAIYPEHGKDAKTLMRNADTAMY 708 Query: 518 YIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEA 577 + G N W F M E + + L +A + N+L + YQP I + ++ EA Sbjct: 709 QSKIRGKNNWTVFQNTMIEGANNHIRIKTELHQAFTRNELYICYQPIIELKENKVVAAEA 768 Query: 578 LARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLS 637 L RW + G + P + IPLAEE G I +G W++ + C Q EW ++VN+S Sbjct: 769 LLRWQNTTLGQINPDQIIPLAEETGMIIPLGYWILDKVCTQAKEWEFITGSKIKVAVNIS 828 Query: 638 ALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVD 697 L + ++V + + L E+TES ++ I ++ L DMG+ S+D Sbjct: 829 TLQLKQKDFIHKVQLILKRTKLSADSLIFEVTESAFIDDSKFILSQLNKLSDMGIHFSLD 888 Query: 698 DFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVE 757 DFG G+S L + S P +KID+ F+ T L+L+ +I ++ ++L L+V+AEG+E Sbjct: 889 DFGVGYSFLQYIKSYPFKNLKIDRVFIQGVNTNHNELSLINSIITMARNLKLSVIAEGIE 948 Query: 758 TKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 T EQ E++R ++C ++QG++FS+PL ++ ++ Sbjct: 949 TAEQLELMRSMNCDMVQGWYFSKPLSGDKFLFYL 982 Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 100/259 (38%), Gaps = 7/259 (2%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 + ++ + + G + N + N AA Y REE+I + + I Sbjct: 310 NQLKISEERYRNLMNAVADGIFIHNLQGAFLEVNEAACLSLNYSREELINSYVWD-IEVG 368 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRD 124 + N + G EGM +KDG+ L+ +A G+ LA+VRD Sbjct: 369 FSQESLNQLWENVQKGPINTEGMH-----RRKDGTTFPVDVRLAVFNATGEKLVLAIVRD 423 Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 +++ + R+L A++ VI+ D I N E GY E G + Sbjct: 424 ITLQKRSEATIRKLTRALEQSPVLVIITDKTGTIEYVNAKVIEQTGYRKEELVGGN-TRI 482 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 L + P + + + L E L ++GE W+ A ISP+ + + + + Sbjct: 483 LRSGQTPHEIYKTMWEHLANGEEWHGELLNKNKSGEHFWVSAIISPIRNDNEEITHYLAV 542 Query: 245 FSDITEERQIRQLEGNILA 263 D+T+++ ++ + Sbjct: 543 MEDVTQKKSYEEMLKHQAT 561 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 783 bits (2024), Expect = 0.0, Method: Composition-based stats. Identities = 184/744 (24%), Positives = 331/744 (44%), Gaps = 64/744 (8%) Query: 115 KVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVL----DPERHIVQCNRAFTEMFG 170 ++ L + + E + + ++ + +H + + D ER I++CNR F +++ Sbjct: 190 QLRELDIDQFIQNEHSLRNTLKEQEVIFEHAGTGICFIKDSQDHERKIIRCNRKFADIYD 249 Query: 171 YCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISP 230 Y + E G L E ++ L + + + + G W + + Sbjct: 250 YRVEELIGQSSSILYPDFEAFSELGDSAYPSLMEGTLYTQKMKMKRKDGTLFWTQIRGNI 309 Query: 231 VYDVLAHLQNLVMTFSDITEERQIRQLEG--NILAAMCSSPPFHEMGEIICRNIESVLNE 288 + L + DI ++ + + + + + R++ N+ Sbjct: 310 ISSNEPGL-GYIWIVEDIDQQVKADEALKVILNEQNLILDYAMVGIVFLKNRSVTR-CNQ 367 Query: 289 SHVSLFALRNGMPIHWASSS--------------HGAEIQNAQSWSATIR--QRDGAPAG 332 +F G +S + + + + ++DG+P Sbjct: 368 RFEEMFGYNAGELAGSSSRQWYLTEQDWKAAGKACYKPLSQGKVFQDEMLLSRKDGSPIW 427 Query: 333 --ILQIKTSSGAETSAFIERVADISQHMAALAL--------------------------- 363 + I DI++ AA Sbjct: 428 CEVTSKAIDPDDLAKGSIWITMDITERKAADVALARAHEDLELRVKERTKELAKANMDLL 487 Query: 364 ----EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV----SPVVYLIGVDHIQ 415 E++ + + ++ + D +TGLPNR L L++ + A V I +D + Sbjct: 488 VEINERKMAEERVKHMALHDALTGLPNRLLLEERLENALSDAKSHQWQLAVLFIDLDRFK 547 Query: 416 DVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVS-LENDVSNITQIADEL 474 V D+LG+ DQ L+EV NR + + + + R+ G +FV+V + I + +++ Sbjct: 548 LVNDTLGHHEGDQLLVEVANRLHQVIGANDTVARLGGDEFVIVLNEIAGSTEINGVIEDI 607 Query: 475 RNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSP 532 + + + + +T SIG++ G+ L+ A AM + + +G N Q+F+ Sbjct: 608 QQNFKPAVKLALQDMFVTPSIGVAIYPEDGETPVQLMKNADAAMYHAKASGRNCAQYFNR 667 Query: 533 AMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPS 592 ++++ +KER+ L AL +A+ Q +L YQPQ+ ++ + G EAL RW+ P G + P Sbjct: 668 SLDDSLKERISLENALNQALKLGQFELYYQPQLDVKSNRIIGAEALIRWNHPEKGMISPD 727 Query: 593 RFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSD 652 FIPLAEE G I +IG WV+ +A QLA+WR Q ++SVNLSAL + +V+D Sbjct: 728 AFIPLAEESGLIVDIGSWVLHQASSQLAQWRKQGFDQLSVSVNLSALQVQKESFAREVAD 787 Query: 653 AMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSL 712 + +G+ L +E+TESM+M + E + + ++G+ +SVDDFGTG+S LS L Sbjct: 788 VIREYGVPEACLDLELTESMIMRNAEETIAALDKIHNLGIQISVDDFGTGYSSLSYLKRF 847 Query: 713 PVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRV 772 P+ ++KID+SFV + + + I S+ +LNL V+AEGVET Q E+LR C Sbjct: 848 PLDKLKIDRSFVQDITVDTDDAMICKTIISMAHNLNLQVIAEGVETNAQLELLRDYGCEQ 907 Query: 773 IQGYFFSRPLPAEEIPGWMSSVLP 796 QGY F++PLP E++ + + Sbjct: 908 YQGYLFAKPLPVEQMTEHLLASPC 931 >UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W545_9CYAN Length = 709 Score = 783 bits (2023), Expect = 0.0, Method: Composition-based stats. Identities = 178/710 (25%), Positives = 299/710 (42%), Gaps = 48/710 (6%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPER-HIVQCNRAFTEMFGYCISEASGM 179 + +D +E +++ + + ++ LD V + ++ N+A + G + E Sbjct: 3 ITQDNGIEPKSQKRHQLIPAILNSLDEVVWSASAQTYKLLYINQAAETILGRTLCELYDQ 62 Query: 180 -QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 L+ P+ + + Q L ++ E+ ++ GE WI + + D + Sbjct: 63 PTLWELMIHPDDRQRVQQQF-QSLGESGNQAVEYRIVRPDGEVRWIHNRVCAIADETGTV 121 Query: 239 QNLVMTFSDITEERQIRQLEGNILA----AMCSSPPFHEMGEIICRNI------ESVLNE 288 + DIT+ +Q M +S + + I + VL Sbjct: 122 IRIDGIARDITQRKQAEVQLCPENDLLQGIMQTSIAAITVVDTQGNIIFANARSQQVLGL 181 Query: 289 SHVSLFALRNGMPIHWASSSHGAEIQNAQ--------------SWSATIRQRDGAPAGIL 334 + L R P + G Q I DG + Sbjct: 182 TQSELVERRYNCPTWQITDFQGGPFPEEQLPFQQVMVTGQPVFDVQHAIEWADGTRKYLS 241 Query: 335 ---QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLH 391 + + + V DIS H + + + D +T LPNR Sbjct: 242 VNGAPLKDADGVITHIVFSVTDISHH--------KHVEEQLCHDALHDNLTRLPNRTLFM 293 Query: 392 NYLDDLVDKAVS-----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQY 446 ++ + A V + +D + V DSLG+ DQ L + + ++ Sbjct: 294 ERVNHAIKLAKRNQDYLFAVLFLDLDRFKVVNDSLGHDVGDQLLTATARQLEKCVRTTDT 353 Query: 447 LCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDL--GK 503 + + G +F ++ + D+ + T++A+ ++ + P +++ + SIGI+ + Sbjct: 354 VAHLSGDEFTILLEDIKDIKDATRVAERIQATLKAPFNLNNHEVFTSASIGIALSSTGYE 413 Query: 504 NRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQP 563 + +L A AM ++ G + F M+ E L L L+ A+ + ++ YQP Sbjct: 414 RSEDILRDADIAMYRAKELGKARHEIFDKIMHARALELLRLENDLRRALERQEFEVYYQP 473 Query: 564 QIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWR 623 TG L G EAL RW P G V P+ FIP+AE+ G I +G WV+ EACRQL W Sbjct: 474 ITSLVTGMLTGFEALVRWRHPELGLVSPAEFIPVAEDTGLIIPLGEWVLHEACRQLRMWH 533 Query: 624 SQNI--HIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIF 681 +Q +SVNLS + L Q+ + G+DG L +EITES++ME+ + Sbjct: 534 TQFPTPEPLKMSVNLSGKQIKEPDLIEQIDHILAETGLDGSFLKLEITESILMENAETVT 593 Query: 682 KRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAIT 741 K + LR + LSVDDFGTG+S LS L PV +KID+SFV + + R ++ I Sbjct: 594 KMLLQLRARNIQLSVDDFGTGYSSLSYLHRFPVNTLKIDRSFVSKMNPKNRNTEIIRTII 653 Query: 742 SIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 ++ SL + V+AEGVET EQ L+ ++C QGY FS+PL + Sbjct: 654 TLAHSLRMDVIAEGVETLEQLTELKLLNCEQGQGYLFSKPLTKCAAGLLL 703 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 38/271 (14%), Positives = 92/271 (33%), Gaps = 23/271 (8%) Query: 10 ADGIFF---PALEQNMMGAVLINEND-EVMFFNPAAEKLWGYKREEVIGNN--IDMLIPR 63 + L + ++++ N AAE + G E+ +++I Sbjct: 13 SQKRHQLIPAILNSLDEVVWSASAQTYKLLYINQAAETILGRTLCELYDQPTLWELMIHP 72 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLAL 121 D R + + E G + E ++ + DG W + ++ E + + Sbjct: 73 DDRQRVQQQFQSLGESGNQ-----AVEYRIVRPDGEVRWIHNRVCAIADETGTVIRIDGI 127 Query: 122 VRDASVEMAQKEQT----RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 RD + + Q L + + V+D + +I+ N ++ G SE Sbjct: 128 ARDITQRKQAEVQLCPENDLLQGIMQTSIAAITVVDTQGNIIFANARSQQVLGLTQSELV 187 Query: 178 GMQP------DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV 231 + T FP + Q ++ + + G + ++ + +P+ Sbjct: 188 ERRYNCPTWQITDFQGGPFPEEQLPFQQVMVTGQPVFDVQHAIEWADGTRKYLSVNGAPL 247 Query: 232 YDVLAHLQNLVMTFSDITEERQIRQLEGNIL 262 D + ++V + +DI+ + + + + Sbjct: 248 KDADGVITHIVFSVTDISHHKHVEEQLCHDA 278 >UniRef50_A8FY98 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FY98_SHESH Length = 951 Score = 783 bits (2023), Expect = 0.0, Method: Composition-based stats. Identities = 186/832 (22%), Positives = 350/832 (42%), Gaps = 47/832 (5%) Query: 1 MKLTDADNAA---DGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNI 57 + L A +A+ + +F + + N ++ N E + GY +E+ G Sbjct: 124 LALHAAKSASVNNENLFNSIFNGVTDACIFADSNRNIVSINQGFELMMGYGIDELEGKTA 183 Query: 58 DMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFA--LSKVSAEGK 115 ++ D I N + + E KDGS I + + + + Sbjct: 184 SIIYESDEEYERQGRIHFNLAAKE---KVTPYEANYRHKDGSIIVGETSRIVIRTLDDQI 240 Query: 116 VYYLALVRDASVEM----AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY 171 + Y+ +RD + A +E T L V + I D + ++ N++ ++FGY Sbjct: 241 LGYVGFIRDVTDRKKATTALQESTAMLSHHVQNTPLGCISWDSNLNCIEWNKSAEKIFGY 300 Query: 172 CISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV 231 E G +L E D + L + +T+ G I + +P+ Sbjct: 301 SPDEVIGHALLEILVSEEIRDDINNIGKILFKGNKCTRSSNENITKDGRTIICEWYSTPI 360 Query: 232 YDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESV 285 V + + DITE +Q + + + + + + ++ Sbjct: 361 VGVNGEVIGVTSLILDITESKQAELKLKHAASVFTHTNQGITITDTSGVIIEVNDAFSAI 420 Query: 286 LNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG---ILQ 335 + + L++G A +Q W+ I ++++ + Sbjct: 421 TGYARDEVIGQNPRVLQSGRHSPEFYREMWATLQADGHWTGEIWNKRKNDEIYPEMLTIS 480 Query: 336 IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLD 395 + + ++ DI+ ++ ++ +E++ +D +T LPNR L + L Sbjct: 481 AVLDATGKVQNYVALFNDITAI--------KEHQEQLERIAHYDTLTNLPNRTLLADRLT 532 Query: 396 DLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIE 451 + + V + +D +DV D+ G+ D+ L+ + R +E L+ L RI Sbjct: 533 QSMVQVRRRKSSLAVVFLDLDKFKDVNDAYGHDVGDKLLIVISRRLKEALRDIDTLARIG 592 Query: 452 GTQFV-LVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYL 508 G +FV ++ + + + L S + ++ ++ S+G++ G + D L Sbjct: 593 GDEFVAVLMDIEKGEDCEPVLERLLEAASGSVTVEGIMLKVSASMGVAIYPQDGIDADQL 652 Query: 509 LSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAE 568 L A AM + G N + F A N ++ R ++++A+ ++ L YQP++ Sbjct: 653 LRHADQAMYVAKHEGKNCYHLFDTAQNIAMQIRHDDLQSMRKALDQSEFVLYYQPKVNMR 712 Query: 569 TGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEI-ENIGRWVIAEACRQLAEWRSQNI 627 TG + G EAL RW P G V P+ F+P A E I +G WVI A Q+A W+ + Sbjct: 713 TGAIIGAEALIRWLSPERGLVGPNEFLP-AIENHVISIEVGEWVIDTALGQIAAWQELGL 771 Query: 628 HIPALSVNLSALHFRSNQLPNQVSDAMHAW-GIDGHQLTVEITESMMMEHDTEIFKRIQI 686 +SVN+SAL + + ++ + A + L +E+ E+ +++ ++ + Sbjct: 772 -DIPVSVNVSALQLQHDGFVTCLAALLEAHPEVAPSSLEIEVLETSLIDDVMQVSATMLA 830 Query: 687 LRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQS 746 ++GV ++DDFGTG+S L+ L LP + IKID++FV LT LA++E + S+ +S Sbjct: 831 CIELGVTFALDDFGTGYSSLTYLRRLPASLIKIDQTFVLDMLTTPDDLAIVEGVVSLAKS 890 Query: 747 LNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLK 798 V+AEGVET L + C + QGY +RP+ A++IP W + P Sbjct: 891 FKHKVIAEGVETIAHGTTLLQTGCELAQGYGIARPMMAKDIPEWSVNWKPDD 942 >UniRef50_C7RQ11 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQ11_9PROT Length = 978 Score = 783 bits (2022), Expect = 0.0, Method: Composition-based stats. Identities = 187/722 (25%), Positives = 323/722 (44%), Gaps = 43/722 (5%) Query: 111 SAEGKVYYLALVRDASVEMAQKEQ-------TRQLIIAVDHLDRPVIVLDPERHIV---Q 160 + ++ DA+ + +++ T + + + + + Sbjct: 124 RRDDPASLAGVIEDAARQARFRQESSSVRPATTHRQLVLSAGPTVLYACGVDGQSLVPLW 183 Query: 161 CNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGE 220 + T + + +E + ++ + + + L E+ G Sbjct: 184 VSDNITRVLHFSPAECL-APDWWVSHVHDADRAHVLETWPRLLADGSLLQEYRFRDGQGV 242 Query: 221 KIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICR 280 W++ ++D +V + D+T + + + A+ S+ + ++ R Sbjct: 243 VRWLRDHKRLLFDANHQPLAVVGNWDDVTAGHALAERQRLHATALESTRDGVLIADLTGR 302 Query: 281 ------NIESVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRD 327 + + L++G + A + A W + R+ D Sbjct: 303 IISVNPAFSEMTGYTAAEAIGRNPRLLQSGRHDRAFYQAMWASLTQAGHWQGELWNRRAD 362 Query: 328 GAPAG---ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGL 384 G L + + + ++ D+S+ + + +E L +DP+T L Sbjct: 363 GEIYPQWATLSVVKDEHGQPTHYLAVFTDLSK--------LKHREEELEHLAHYDPLTDL 414 Query: 385 PNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREK 440 PNR L + L +++A V +I +D ++V DSLG+A D+ LL V R + + Sbjct: 415 PNRLLLRSLLQHALERAQRQGGKSAVLVINLDQFKNVNDSLGHALGDELLLGVTARLKAR 474 Query: 441 LKPDQYLCRIEGTQFV-LVSLENDVSNITQIADELRNVVSKPIMI-DDKPFPLTLSIGIS 498 L+ + + R+ +FV ++ D N IA +L ++ P ++ D SIGIS Sbjct: 475 LRHEDVVGRLGADEFVAILEASQDAENAGSIAGDLLAALAPPFVLADGHETYARASIGIS 534 Query: 499 YD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQ 556 GK + LL +A AM ++ GGN + F++ + +RL + AL+ A+ + Sbjct: 535 VFPQDGKGANDLLRSADVAMHRAKQRGGNQYAFYTGELGHGALQRLEMETALRRALIQGE 594 Query: 557 LKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEAC 616 L L YQP++ +G + G EAL RW P G VPP RFIPLAEE G I IG WVI E C Sbjct: 595 LVLHYQPKLDLASGVIVGGEALLRWQRPGFGLVPPYRFIPLAEETGLIVPIGAWVINETC 654 Query: 617 RQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEH 676 RQ+ W ++VN+SA F +L ++ A+ +D L +E+TESM+M Sbjct: 655 RQIRAWAEAGQPSVMVAVNVSARQFAGGELEAVLATALRKHAVDPRMLGLELTESMLMAA 714 Query: 677 DTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILAL 736 + +R+ LR +GV +++DDFGTG+S LS L PV E+KID+SF+ +++ + + Sbjct: 715 PEQATERLDALRRVGVAVALDDFGTGYSSLSYLSRFPVDELKIDRSFITHIVSDPKAANI 774 Query: 737 LEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLP 796 A+ ++ + L VVAEGVET+ Q LRK C IQGY FS P+PA+E +S Sbjct: 775 ATAVIALAHRMALKVVAEGVETETQLSYLRKNRCDQIQGYLFSAPVPADEFATLVSQGKC 834 Query: 797 LK 798 L Sbjct: 835 LP 836 Score = 150 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 86/281 (30%), Gaps = 28/281 (9%) Query: 3 LTDADNAADGIFFP--------------ALEQNMMGAVLINENDEVM---FFNPAAEKLW 45 + DA A F L + + + + + ++ Sbjct: 135 IEDA--ARQARFRQESSSVRPATTHRQLVLSAGPTVLYACGVDGQSLVPLWVSDNITRVL 192 Query: 46 GYKREEVIGNNIDM-LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTR 104 + E + + + + R E G + +E + G W R Sbjct: 193 HFSPAECLAPDWWVSHVHDADRAHVLETWPRLLADGS-----LLQEYRFRDGQGVVRWLR 247 Query: 105 FALSKVSAEGKV--YYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCN 162 + + D + A E+ R A++ V++ D I+ N Sbjct: 248 DHKRLLFDANHQPLAVVGNWDDVTAGHALAERQRLHATALESTRDGVLIADLTGRIISVN 307 Query: 163 RAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKI 222 AF+EM GY +EA G P LL + L + Q E GE Sbjct: 308 PAFSEMTGYTAAEAIGRNP-RLLQSGRHDRAFYQAMWASLTQAGHWQGELWNRRADGEIY 366 Query: 223 WIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILA 263 A++S V D + + F+D+++ + + ++ Sbjct: 367 PQWATLSVVKDEHGQPTHYLAVFTDLSKLKHREEELEHLAH 407 >UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magnetospirillum RepID=A4U4R0_9PROT Length = 840 Score = 782 bits (2021), Expect = 0.0, Method: Composition-based stats. Identities = 188/847 (22%), Positives = 334/847 (39%), Gaps = 77/847 (9%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 + +G +LI ++ V +N K G E +G + L P+ + Sbjct: 10 LRTLTDAGEIGIILIGQDGLVKLWNAWMTKASGITAEAALGTRLQDLYPQLQGARVVGAV 69 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIW----------TRFALSKVSAEGKVYYLALVR 123 GG + + S +L + V+ + + + + Sbjct: 70 DEALHGGLSAILSSSINKRLFPLNHEGRTPGKPEPMQQIVAVKPVVVAEDQRDCLIQVF- 128 Query: 124 DASVEMAQKEQTRQL------------------IIAVDHLDRPVIVLDPERHIVQCNRAF 165 D + ++ RQ VD+ ++ + I N A Sbjct: 129 DVTTMSHREALLRQQARTMQALAENYRLSELHNRAIVDNTADAIVTFGEDGAIGTYNPAA 188 Query: 166 TEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIK 225 +FGY E G LL ++ ++ L + E + + G ++ Sbjct: 189 IRIFGYDPYEIVGKSVG-LLIPGVLGKSGQLETERFLD----IRAEVVGRRKIGASFPLE 243 Query: 226 ASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSP----------PFHEMG 275 S++ + L + V DITE + + + + Sbjct: 244 LSLNAM--ELGGQRLFVAIAHDITERKAAEEELRKQKEWLSTLINAMPDLVCFKDGKGKW 301 Query: 276 EIICRNIESVLNESHVSLFALRNGMPIHWASS----SHGAEIQNAQSWSA--------TI 323 + + + HV + H + + + ++W + Sbjct: 302 LVANKFYLDIAGLDHVDYHGRTSADLAHMSRGFGEFMLTGSLSDERAWQEKKPVAYEKEL 361 Query: 324 RQRDG--APAGILQI-KTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDP 380 DG +++I + D++ E++ + I L D Sbjct: 362 PTPDGGAKVFDVIKIPLYEEDGARRGLVMVGRDVT--------ERKLAAARIHHLAHHDS 413 Query: 381 MTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNR 436 +TGLPNR L + +A + + +D +D+ D+LG+ D L V R Sbjct: 414 LTGLPNRVLFQERLRTALAQAKRLGHKVALMFLDLDKFKDINDTLGHHLGDLLLKAVAKR 473 Query: 437 FREKLKPDQYLCRIEGTQFVLVSLEND-VSNITQIADELRNVVSKPIMIDDKPFPLTLSI 495 ++ + R+ G +F +V D + +A+ + +S+P +D+ + SI Sbjct: 474 LLRCVRETDTVARLGGDEFAVVLTNLDDPEGASNVAESIIASISEPFGLDEHEVNTSTSI 533 Query: 496 GISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAIS 553 GI+ + + LL A AM + G N + F+ M+ ++ R V+ L+ A+ Sbjct: 534 GITIFPDDAVDSEVLLKNADLAMFRSKAEGRNNYHFYVAEMDAEIQARKVVEHDLRVALG 593 Query: 554 NNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIA 613 +QL++ YQP I +TGE+ G EAL RW P G V P FIP+AE I +GRW++ Sbjct: 594 TDQLEMHYQPLIEMKTGEVVGCEALIRWKHPTRGWVSPVEFIPIAERTDLIVPLGRWILH 653 Query: 614 EACRQLAEWRSQNIHIPALSVNLSALHFR-SNQLPNQVSDAMHAWGIDGHQLTVEITESM 672 +C Q +W + ++VNLS + F+ L ++D + G QL +EITE + Sbjct: 654 RSCLQGRDWARAGLPPQKIAVNLSPVQFKNHTALLAMIADILDQTGFPPDQLQLEITEGI 713 Query: 673 MMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKR 732 M++ ++ LRDMGV +S+DDFGTG+S L+ L PV ++KID+SFV Sbjct: 714 AMQNVEATVDVLRQLRDMGVLISIDDFGTGYSSLNYLKRFPVDKLKIDRSFVVDIGLHPD 773 Query: 733 ILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 A++ AI ++G SL V EGVET EQ + L+ QG++F++ LP +E ++ Sbjct: 774 NAAVVNAIVTLGHSLGTRVNVEGVETIEQLDFLKAHGVDEAQGFYFAKALPPDEFARFVR 833 Query: 793 SVLPLKI 799 P + Sbjct: 834 EKSPWPL 840 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 46/275 (16%), Positives = 102/275 (37%), Gaps = 20/275 (7%) Query: 2 KLTDAD----NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNI 57 + A ++ ++ V E+ + +NPAA +++GY E++G ++ Sbjct: 145 RTMQALAENYRLSELHNRAIVDNTADAIVTFGEDGAIGTYNPAAIRIFGYDPYEIVGKSV 204 Query: 58 DMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVY 117 +LIP + + + R + E+ +K G+ +L+ + G+ Sbjct: 205 GLLIPG--------VLGKSGQLETERFLDIRAEVVGRRKIGASFPLELSLNAMELGGQRL 256 Query: 118 YLALVRDASVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCI 173 ++A+ D + A +E+ R L ++ + V D + + N+ + ++ G Sbjct: 257 FVAIAHDITERKAAEEELRKQKEWLSTLINAMPDLVCFKDGKGKWLVANKFYLDIAGLDH 316 Query: 174 SEASGMQPDTLLNI----PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASIS 229 + G L ++ EF + ++ + E L T G Sbjct: 317 VDYHGRTSADLAHMSRGFGEFMLTGSLSDERAWQEKKPVAYEKELPTPDGGAKVFDVIKI 376 Query: 230 PVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAA 264 P+Y+ + LVM D+TE + ++ Sbjct: 377 PLYEEDGARRGLVMVGRDVTERKLAAARIHHLAHH 411 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 782 bits (2021), Expect = 0.0, Method: Composition-based stats. Identities = 166/564 (29%), Positives = 261/564 (46%), Gaps = 30/564 (5%) Query: 250 EERQIRQLEGNILAAMCSSPPFHEMGEIIC---RNIESVLNESHVSLFALRNGMPIHWAS 306 E +Q + A+ S + ++ + + +L + P S Sbjct: 298 ERKQSEVFMRKLSQAVEQSSNAIIITDLNGTIEYANTTFSTNTGYALHDIIGKKPNMHKS 357 Query: 307 SS--------HGAEIQNAQSWSATI--RQRDGAPAGIL---QIKTSSGAETSAFIERVAD 353 A + +SW R+ +G L + + ++ D Sbjct: 358 GKTSRATYADMWAHLGRGESWQGEFINRRHNGEERIDLVRVSPVREADGRITHYLAIEED 417 Query: 354 ISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLI 409 I+ Q+ ++ IE L FD +TGLPNR L + A V + Sbjct: 418 ITN--------QKNAQARIESLAHFDVLTGLPNRALLDERAQRALRLAEEDQATLAVMFL 469 Query: 410 GVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQ 469 +DH +++ D+LG+ D L+E+ R R L+ D L R+ G +FVL+ + + + Sbjct: 470 DLDHFKNINDTLGHNLGDTLLVELAQRLRAVLRRDDTLSRLGGDEFVLLLPGANRESAKK 529 Query: 470 IADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGW 527 IA EL +++P I + SIGI+ G + + L A AM ++ G N + Sbjct: 530 IAQELMRAINEPYRIGSHELNVMASIGIAVYPADGMDFETLCKNADVAMYRAKQEGRNAY 589 Query: 528 QFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHG 587 + F+ M L + AL++AI+ QL + YQPQI +G++ G EAL RWH P G Sbjct: 590 RSFTQEMQAYSTRYLQVLNALRQAIAQEQLHVHYQPQISLISGDVIGAEALLRWHHPELG 649 Query: 588 HVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLP 647 ++ P+ FIP+AEE G I IG WV+ A Q +W + ++VNLSA+ FR LP Sbjct: 650 NISPAEFIPIAEESGLILQIGEWVLRVAVAQAKKWHQLGLDKLIIAVNLSAVQFRHAGLP 709 Query: 648 NQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLS 707 N V + L +E+TE + M + L + GV +S+DDFGTG+S LS Sbjct: 710 NLVMQILKEEDFPPQYLELELTEGVAMHDPQGAIAMMNSLHERGVRMSIDDFGTGYSSLS 769 Query: 708 RLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRK 767 L ++KID+SFV T+ A++ AI + ++L L +AEGVET EQ LR+ Sbjct: 770 YLKQFKAYKLKIDQSFVRDISTDAEDKAIVSAIIGMAKNLGLQTIAEGVETAEQQAFLRE 829 Query: 768 IHCRVIQGYFFSRPLPAEEIPGWM 791 C QGY +S+PLPA + ++ Sbjct: 830 EGCHEAQGYHYSKPLPAADFETFI 853 Score = 99.7 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 50/137 (36%), Gaps = 1/137 (0%) Query: 127 VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 + R+L AV+ +I+ D I N F+ GY + + G +P+ Sbjct: 298 ERKQSEVFMRKLSQAVEQSSNAIIITDLNGTIEYANTTFSTNTGYALHDIIGKKPNMH-K 356 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 + + L + Q EF+ GE+ +SPV + + + + Sbjct: 357 SGKTSRATYADMWAHLGRGESWQGEFINRRHNGEERIDLVRVSPVREADGRITHYLAIEE 416 Query: 247 DITEERQIRQLEGNILA 263 DIT ++ + ++ Sbjct: 417 DITNQKNAQARIESLAH 433 Score = 88.1 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 47/146 (32%), Gaps = 9/146 (6%) Query: 1 MKLTDADNAAD---GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNI 57 + + ++ A+EQ+ ++ + N + + N GY ++IG Sbjct: 293 LAIAIERKQSEVFMRKLSQAVEQSSNAIIITDLNGTIEYANTTFSTNTGYALHDIIGKKP 352 Query: 58 DMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK-- 115 +M A + R E E + +G + +S V Sbjct: 353 NMHKSGKTSRATYADM----WAHLGRGESWQGEFINRRHNGEERIDLVRVSPVREADGRI 408 Query: 116 VYYLALVRDASVEMAQKEQTRQLIIA 141 +YLA+ D + + + + L Sbjct: 409 THYLAIEEDITNQKNAQARIESLAHF 434 >UniRef50_Q1GXN7 Diguanylate cyclase/phosphodiesterase n=3 Tax=Proteobacteria RepID=Q1GXN7_METFK Length = 951 Score = 782 bits (2021), Expect = 0.0, Method: Composition-based stats. Identities = 203/822 (24%), Positives = 360/822 (43%), Gaps = 59/822 (7%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + D + + + + + +++ +F + E ++G E +G + Sbjct: 131 DMLDKLQEQELQYRQLVMNSPDIFIRYDQDCRRIFLSDGYEAVFGVPAAEALGRKPTEVW 190 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA----EGKVY 117 R + PE E EL+ G + + +L V Sbjct: 191 GRPM--MRPEDFEARLREVMRSGEEQEIELEWV---GDEHYVCQSLHAVPERNVKGEIKG 245 Query: 118 YLALVRDASV----EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY-C 172 L + RD S E +++ R +++ V + D ++ N A+ E G Sbjct: 246 VLTITRDISHIRRVERELRKRERYQSALIENFPFVVWLKDLNSKLLAANSAYAEFAGVAS 305 Query: 173 ISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVY 232 E G L + + +++L + R GEK WI+A SP+ Sbjct: 306 KDELEGKTDFDLFPLQDARTHVEGD-KRVLQSGQPSHSVLQVTKRNGEKAWIEAYKSPMV 364 Query: 233 DVLAHLQNLVMTFSDITEERQIRQLE----GNILAAMCSSPPFHEMGEIICRNI------ 282 V + V F DIT+ +Q + + + + ++P ++ R + Sbjct: 365 -VDGKVMGTVGFFRDITDIKQNEEKLIQRERELQSLIDNTPDTIIRYDLNARRLYVNTPK 423 Query: 283 --------ESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQR--DGAPAG 332 ++ + G I +A + + +G Sbjct: 424 LKRIGIESGRLIGTTPSE---YPGGEAYMKYEEKIRGVINSATPDFLELHGKADNGNTWF 480 Query: 333 I---LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNN 389 I + + + + DI+ E + R+ I L +D +TGLPNR Sbjct: 481 IHVRIVPEFGEQGQVIGVLAVERDIT--------ELMEYRERIHYLAYYDALTGLPNRTL 532 Query: 390 LHNYLDDLVDKA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQ 445 + ++ ++ A + ++ +D ++V D+LG+ D L+ V R ++ Sbjct: 533 FADRVNQVLADASWHEQRFGLMMLDLDRFKEVNDTLGHQAGDDLLVAVAQRLNASVRSYD 592 Query: 446 YLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLG 502 + R+ G +F ++ E + ++ IA ++ + ++KP +I DK ++ SIGI+ D G Sbjct: 593 TIARLSGDEFAILLPELRNPDDLATIARKINDEIAKPFLIHDKELFISTSIGIAIYPDDG 652 Query: 503 KNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQ 562 +R L +A AM + + G N +QF+S + E ++LGA++++A+ N + +L YQ Sbjct: 653 DDRATLFKSADVAMYHAKNYGRNNYQFYSRELGSKASEYIMLGASIRQALKNAEFELFYQ 712 Query: 563 PQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEW 622 PQ+ +GE+ G EAL RW +P G V P RFI +AEE G I IG WV+ EAC + Sbjct: 713 PQVDLMSGEIVGAEALLRWRNPQLGVVMPDRFIKVAEESGLIVEIGEWVLREACSAVVCL 772 Query: 623 RSQNI--HIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEI 680 H +++VNLS+ F N L V D + G L +EITES+++E EI Sbjct: 773 NRYRPDDHPLSMAVNLSSRQFLYNDLLASVKDILAETGCKPEWLKLEITESLLLEDSQEI 832 Query: 681 FKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAI 740 + ++MG+ +S+DDF TG+S +S L P++++KID+SFV ++ L L+ AI Sbjct: 833 ISTLSTFKEMGITISIDDFCTGYSAMSYLGQFPISQVKIDRSFVRDIAAKQDKLELITAI 892 Query: 741 TSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPL 782 I +L L +VAEGVE+K+Q +L+ C + QGYFF +P+ Sbjct: 893 IRIAHALRLELVAEGVESKQQANLLKIQGCTIAQGYFFGKPM 934 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 52/388 (13%), Positives = 124/388 (31%), Gaps = 39/388 (10%) Query: 12 GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPE 71 + A+ + ++ + + + N AA ++ GY + ++ + +I Sbjct: 18 DMLSFAINRIREIVLVCDADARICLANLAACEVLGYSEKLLLQMSATDIITHLDSVGWKN 77 Query: 72 YIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVE--- 128 R ++ M +E L + G + + + Y + L RD + Sbjct: 78 DWRRLQQQH-----VMVQETSLRNQAGDTVPVEIQSNYFVDADQAYCVLLGRDLTARFDM 132 Query: 129 -MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI 187 +EQ Q V + I D + + + + +FG +EA G +P + Sbjct: 133 LDKLQEQELQYRQLVMNSPDIFIRYDQDCRRIFLSDGYEAVFGVPAAEALGRKPTEVWGR 192 Query: 188 P-EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 P P D RL++++ + E + + P +V ++ ++ Sbjct: 193 PMMRPEDFEARLREVMRSGEEQEIELEWVG-DEHYVCQSLHAVPERNVKGEIKGVLTITR 251 Query: 247 DITEERQIRQLEGNIL----AAMCSSPPFHEMGEII------CRNIESVLN-ESHVSLFA 295 DI+ R++ + A + + P + ++ S L Sbjct: 252 DISHIRRVERELRKRERYQSALIENFPFVVWLKDLNSKLLAANSAYAEFAGVASKDELEG 311 Query: 296 LRNGMPIHWASSSH----GAEIQNAQSWSA---TIRQRDGAPAGILQIKTSS--GAETSA 346 + + + + S + +R+G A I K+ + Sbjct: 312 KTDFDLFPLQDARTHVEGDKRVLQSGQPSHSVLQVTKRNGEKAWIEAYKSPMVVDGKVMG 371 Query: 347 FIERVADISQHMAALALEQEKSRQHIEQ 374 + DI+ + +++ + + Q Sbjct: 372 TVGFFRDIT--------DIKQNEEKLIQ 391 Score = 80.8 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 37/257 (14%), Positives = 82/257 (31%), Gaps = 29/257 (11%) Query: 134 QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPAD 193 Q L A++ + V+V D + I N A E+ GY M ++ + Sbjct: 16 QIDMLSFAINRIREIVLVCDADARICLANLAACEVLGYSEKLLLQMSATDIITH--LDSV 73 Query: 194 NRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEE-- 251 + L + E L + G+ + ++ + D L+ D+T Sbjct: 74 GWKNDWRRLQQQHVMVQETSLRNQAGDTVPVEIQSNYFVDADQAYCVLLG--RDLTARFD 131 Query: 252 --RQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSH 309 ++++ E + +SP + CR L++ + ++F + + + Sbjct: 132 MLDKLQEQELQYRQLVMNSPDIFIRYDQDCR--RIFLSDGYEAVFGVPAAEALGRKPTEV 189 Query: 310 GAE-IQNAQSWSATIRQ--RDGAPAGIL----------------QIKTSSGAETSAFIER 350 + + + A +R+ R G I + + E + Sbjct: 190 WGRPMMRPEDFEARLREVMRSGEEQEIELEWVGDEHYVCQSLHAVPERNVKGEIKGVLTI 249 Query: 351 VADISQHMAALALEQEK 367 DIS +++ Sbjct: 250 TRDISHIRRVERELRKR 266 >UniRef50_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodiesterase (EAL), with GAF and two PAS/PAC sensor domains n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CCD7_METED Length = 1028 Score = 782 bits (2020), Expect = 0.0, Method: Composition-based stats. Identities = 187/851 (21%), Positives = 331/851 (38%), Gaps = 74/851 (8%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVL-INENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 + A + + + + + + ++ N +G IG Sbjct: 178 RSEALIAANEARYRALADALPQMVWVMTSADGSAIYTNERFRTYYG-----SIG-PQREE 231 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK-VYYL 119 PA E + + + E +L + DG+ W + + V G V +L Sbjct: 232 RTSRNHPADTERMAEEWQRAVTHEHTYAVEGRLRRHDGTYRWHKLVMVPVRQNGTVVEWL 291 Query: 120 ALVRDA----SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY-CIS 174 D + + T L +A + V D + +V+ + M G+ Sbjct: 292 GTALDIEDIVTARSTLEHTTDLLRLAQEAAGAGVWQRDLDDDVVRHSPMSARMHGFLGEP 351 Query: 175 EASG------MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLL-TRT-GEKIWIKA 226 + SG + ++ + R L + EF + + + W+ Sbjct: 352 DLSGWIAVSIAEWAARVHPDDLAQ-VRAMHAGALRNGTTYKVEFRVRQSADMDDYRWLMG 410 Query: 227 SISPVYDV-LAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPP--------------- 270 + D +V DIT+ R + +S Sbjct: 411 FGRVIRDETSGRPLRVVGLNLDITDRRTTEDALAQSQTHLRASEERLALALDSGNDGLFD 470 Query: 271 ----------FHEMGEIICRNIESVLNE--SHVSLFALRNGMPIHWASSSHGAEIQNAQS 318 ++ + S L + + H E+ S Sbjct: 471 WNVTTGKVWYSDRWQTMLGYKPGEIEPHILSWERLVHPDDLHQARTLLTEHFGELSATYS 530 Query: 319 WSATIRQRDGAPAGIL----QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQ 374 +R + G +L + + DI+ E++ S Q I Sbjct: 531 SEHRLRSKSGEYTWVLGRGRVVARDEQGAPLRMVGTSIDIT--------ERKASEQRIAY 582 Query: 375 LIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQAL 430 + + D +TGLPNR H +L+ + + + + +D + + D LG+ D+ L Sbjct: 583 MARHDVLTGLPNRTVFHEHLEQRLAEVRRGRGQAALLCLDLDRFKSINDMLGHPAGDELL 642 Query: 431 LEVVNRFREKLKPDQYLCRIEGTQFVLVSLEND-VSNITQIADELRNVVSKPIMIDDKPF 489 ++ R R ++ + R+ G +F ++ D + +A + + V +P+ + Sbjct: 643 CQIATRLRATVRGGDVVVRLGGDEFAIIVSHLDHARQASVLAQRVIDAVGQPLDLGGHLV 702 Query: 490 PLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAA 547 + +SIGI++ G + L A A+ + + N + F+ M+ V+ R+ L Sbjct: 703 TVGISIGIAFAPTNGDTSETLFKNADLALYRAKASARNTYCFYEAGMDAAVEARMQLEFE 762 Query: 548 LKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENI 607 ++EAI+ L YQP + + G EAL RW P G + P FIP AEE G I + Sbjct: 763 MREAITCGSFALHYQPVLRLADHRIVGFEALMRWPHPKRGMIAPDEFIPSAEETGLIVPL 822 Query: 608 GRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVE 667 G W + EACR+ A W ++VN+SA+ F+ L V A+ A G+ H+L +E Sbjct: 823 GSWALQEACREAASWPD----HLRIAVNVSAVQFQQPGLEQGVMSALAASGLAPHRLVLE 878 Query: 668 ITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRC 727 +TES++++ + + L+ +GV +++DDFGTG+S LS L P IKID+SF+ Sbjct: 879 VTESVLVQDAEAVIACLHRLKSLGVRIALDDFGTGYSSLSYLRRFPFDRIKIDRSFISEI 938 Query: 728 LTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 + A++ A+ I L TV AEGVET Q E +R C +QGY SRPLPA+ Sbjct: 939 G-DPGAAAIVRAVVGIAMQLGATVTAEGVETTAQLEQVRSEGCMEVQGYLVSRPLPADRA 997 Query: 788 PGWMSSVLPLK 798 ++SS ++ Sbjct: 998 IEFISSSASIE 1008 >UniRef50_C6CKZ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Dickeya RepID=C6CKZ2_DICZE Length = 689 Score = 781 bits (2018), Expect = 0.0, Method: Composition-based stats. Identities = 175/685 (25%), Positives = 309/685 (45%), Gaps = 36/685 (5%) Query: 131 QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEF 190 +D + V++ + H V N A+ ++GY E +G + Sbjct: 5 AWNSESLFQAILDRCPVGIAVINYDGHYVTVNPAYGAIYGYTQEEMAGRSFTMVFPESAR 64 Query: 191 PADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITE 250 + R +Q L + E+ ++ R G + I + P LV DITE Sbjct: 65 DSVL-ARHRQFLDEGGTLGGEWTVMRRDGVILTIWSESVPFAQHGHRADRLVYVL-DITE 122 Query: 251 ERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESHVSLFAL-----RNG 299 ++ R+ A S+ + I + S + R+ Sbjct: 123 RQKAREQMKIAAAVYESTQEAIIVINTSRSIISINPAFTRLTGYSAADVVGQPSYIFRSD 182 Query: 300 MPIHWASSSHGAEIQNAQSWSATI--RQRDGAPA---GILQIKTSSGAETSAFIERVADI 354 ++ + W + R++DG+ + + + ++ +DI Sbjct: 183 RHDADFYTAMWRTVDEDGVWVGEMWDRKKDGSDYLKEITINVIKDAAGTPINYVGVFSDI 242 Query: 355 SQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIG 410 +Q ++K I + +D +T LPNR++ + L+ V+ A + LI Sbjct: 243 TQ--------RKKQEALIWRQANYDAVTTLPNRHHFQDKLERAVEHAKQSGRPMALMLID 294 Query: 411 VDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVS-NITQ 469 +DH + V DSLG+ D LL V NR + ++ + R+ G +F ++ + + + Sbjct: 295 LDHFKSVNDSLGHRAGDALLLAVSNRLTDCVQGADTIARLGGDEFAIILTDLHQNGDSGC 354 Query: 470 IADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGW 527 +A L +++P ID + ++ SIGI+ + L A AM + G N + Sbjct: 355 LARTLLAQLAQPFNIDGESMLVSASIGIALFPNDSDTLEELFKNADQAMYAAKSAGRNCF 414 Query: 528 QFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHG 587 +++PA+++ + RL L L+ AI Q ++ YQP I T ++ EAL RW P+ G Sbjct: 415 NYYTPALHQAARARLRLTNDLRTAIQCGQFEVYYQPIIELSTNKVVKAEALVRWRHPIRG 474 Query: 588 HVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLP 647 + P+ FIPLAE+ G I +G WV +A QLA+WR +++N S + RS Sbjct: 475 MISPAEFIPLAEDTGLIVPLGDWVARQAITQLAQWRKIFDPHFQVAINQSPVQLRSKDFT 534 Query: 648 NQ-VSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGL 706 + G++G+ + +EITE +++ ++ + + + RD G+ +++DDFGTG+S L Sbjct: 535 EMTWVQELAQHGLEGNAVIIEITEGLLLNAESRVNDNLHLFRDTGIQIAIDDFGTGYSSL 594 Query: 707 SRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLR 766 + L + +KID+SFV+ + L AI ++ SL L VVAEGVET++Q + L Sbjct: 595 AYLRKFDIDCLKIDRSFVEDL--DGVGFELCVAIIAMAHSLGLKVVAEGVETQQQCDTLA 652 Query: 767 KIHCRVIQGYFFSRPLPAEEIPGWM 791 +I C QG+ FSRP+PA E+ + Sbjct: 653 RIGCDYAQGFLFSRPVPAPELTILL 677 Score = 196 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 58/285 (20%), Positives = 112/285 (39%), Gaps = 8/285 (2%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 +T + ++ +F L++ +G +IN + + NPA ++GY +EE+ G + M+ P Sbjct: 1 MTGSAWNSESLFQAILDRCPVGIAVINYDGHYVTVNPAYGAIYGYTQEEMAGRSFTMVFP 60 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVY-YLAL 121 R + R + G + E + ++DG + + G L Sbjct: 61 ESARDSVLARHRQFLDEG----GTLGGEWTVMRRDGVILTIWSESVPFAQHGHRADRLVY 116 Query: 122 VRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 V D + +EQ + + +IV++ R I+ N AFT + GY ++ G P Sbjct: 117 VLDITERQKAREQMKIAAAVYESTQEAIIVINTSRSIISINPAFTRLTGYSAADVVGQ-P 175 Query: 182 DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNL 241 + AD + + + + E + G + +I+ + D N Sbjct: 176 SYIFRSDRHDADFYTAMWRTVDEDGVWVGEMWDRKKDGSDYLKEITINVIKDAAGTPINY 235 Query: 242 VMTFSDITEERQIRQ--LEGNILAAMCSSPPFHEMGEIICRNIES 284 V FSDIT+ ++ A+ + P H + + R +E Sbjct: 236 VGVFSDITQRKKQEALIWRQANYDAVTTLPNRHHFQDKLERAVEH 280 >UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=4 Tax=Comamonadaceae RepID=A1W7N9_ACISJ Length = 1047 Score = 781 bits (2017), Expect = 0.0, Method: Composition-based stats. Identities = 193/701 (27%), Positives = 313/701 (44%), Gaps = 33/701 (4%) Query: 120 ALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLD-PERHIVQCNRAFTEMFGYCISEASG 178 AL + A +E +L + + D +V+ N+ F ++ GY E Sbjct: 345 ALDHAKETDTALRESEARLRAVFNQAAVGIAQTDSRTGRLVRMNQKFCDLLGYSAQELQQ 404 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 M+ + AD + L + + + E + G ++W+ +SP+ Sbjct: 405 MRFQDFSEPSDLAADLEQLQRMLAGELSEYRMEKRYRRKDGSEVWVDLMVSPLRLE-GQP 463 Query: 239 QNLVMTFSDITEE-------RQIRQLEGNILAAMCSSPPFHEMGEIICRNIES--VLNES 289 ++ + DI++ RQ + NIL M + G+I+ RN + Sbjct: 464 EHHLAVVQDISKRKHMEQVLRQSEEPLRNILNHMPVGVNQVQDGKIVFRNDRHVQICGYD 523 Query: 290 HVSLFALRNGMP---IHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSA 346 + H E +A +A ++ DGA + + T+ A Sbjct: 524 IREAPDVDTWWRLVMPDAHQREHAREAWHAAC-TAALKNPDGAIRTVECVITAKSGVRRA 582 Query: 347 FI---ERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS 403 + D +++ + + + L DP+TGLPNR L + L+ + + Sbjct: 583 VELSGMILGDSHIVTMVDQSQRKAAEEEVRYLAYNDPLTGLPNRRLLLDRLEQALAMSAR 642 Query: 404 P----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVS 459 V ++ +D+ + + ++ G D+ L EV R R+ + D+ L R G +FV+V Sbjct: 643 HQLCGAVMMLDLDNFKTINETQGPDMGDRLLREVARRLRDCVPEDETLARHGGDEFVVVL 702 Query: 460 ------LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLG--KNRDYLLST 511 + + ++ + + P ID + LS+GI+ G ++ D LL Sbjct: 703 KDLGADPQEAANRAEEMGQTILAAIRAPFDIDGQQHHTALSVGIAIFRGVRESADELLKR 762 Query: 512 AHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGE 571 + AM + G + +FF P M V ER L A L+ + QL+L YQP++ G Sbjct: 763 SDLAMYEAKAAGRDTLRFFDPQMQAAVSERAALEADLRAGLDAGQLELFYQPKVD--QGR 820 Query: 572 LYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN-IHIP 630 + G EAL RW P G + P+ FIPLAEE G I +G WV+ AC QLA+W + + Sbjct: 821 ITGAEALVRWRHPDRGFISPAEFIPLAEESGLILRVGEWVMRSACAQLAQWSAHPVLGEL 880 Query: 631 ALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDM 690 ++VN+S F QV +A+ A G D +L +E+TE M+++ + ++ LR Sbjct: 881 TVAVNVSPRQFHEGSFVPQVLEALAASGADARRLRLELTEGMLLQDVEDTIAKMVQLRGY 940 Query: 691 GVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLT 750 GVG S+DDFGTG+S L+ L LP+ E+KIDKSFV LT+ + I ++G SL L Sbjct: 941 GVGFSLDDFGTGYSSLAYLKRLPLHELKIDKSFVRDVLTDPNDAVIARTIVALGTSLGLR 1000 Query: 751 VVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 VVAEGVET+ Q L + C QGY S PL A + Sbjct: 1001 VVAEGVETEAQRAFLERNGCHAWQGYLLSPPLQAAAFEALV 1041 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 95/268 (35%), Gaps = 24/268 (8%) Query: 6 ADNAADGIFFPALEQNMMGAVLIN-ENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 A ++ Q +G + ++ N L GY +E+ Sbjct: 355 ALRESEARLRAVFNQAAVGIAQTDSRTGRLVRMNQKFCDLLGYSAQELQQMRFQDFSEPS 414 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV-YYLALVR 123 A E ++ G + E + +KDGS++W +S + EG+ ++LA+V+ Sbjct: 415 DLAADLEQLQRMLAG---ELSEYRMEKRYRRKDGSEVWVDLMVSPLRLEGQPEHHLAVVQ 471 Query: 124 DASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 D S ++ RQ L ++H+ V + + IV N ++ GY I EA + Sbjct: 472 DISKRKHMEQVLRQSEEPLRNILNHMPVGVNQV-QDGKIVFRNDRHVQICGYDIREAPDV 530 Query: 180 -QPDTLLNIPEFPADNRIRLQQLL-------WKTARDQDEFLLLTRTGEKIWIKASISPV 231 L+ ++ A E ++ ++G + ++ S + Sbjct: 531 DTWWRLVMPDAHQREHAREAWHAACTAALKNPDGAIRTVECVITAKSGVRRAVELSGMIL 590 Query: 232 YDVLAHLQNLVMTFSDITEERQIRQLEG 259 D ++T D ++ + + Sbjct: 591 GDSH------IVTMVDQSQRKAAEEEVR 612 Score = 61.9 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 23/169 (13%), Positives = 54/169 (31%), Gaps = 12/169 (7%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEV--IGNNIDML 60 + ++ L +G + ++ +++F N ++ GY E + ++ Sbjct: 479 MEQVLRQSEEPLRNILNHMPVGVNQV-QDGKIVFRNDRHVQICGYDIREAPDVDTWWRLV 537 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGM---SRELQLEKKDGSKIWTRFALSKVSAEGKVY 117 +P + H H + + E + K G + + + V Sbjct: 538 MPDAHQREHAREAWHAACTAALKNPDGAIRTVECVITAKSGVRRAVELSGMILGDSHIVT 597 Query: 118 YLALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIVQCNRA 164 + D S A +E+ R L + L ++LD + + Sbjct: 598 MV----DQSQRKAAEEEVRYLAYNDPLTGLPNRRLLLDRLEQALAMSAR 642 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 781 bits (2017), Expect = 0.0, Method: Composition-based stats. Identities = 183/782 (23%), Positives = 310/782 (39%), Gaps = 84/782 (10%) Query: 56 NIDMLIPRDLRPAHPEYIRHNRE-GGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEG 114 +D E IRH + + G+ + + G++ + R Sbjct: 86 PVDTPFHEAAIRFRHEGIRHYLVIDQQNQPRGILSQTDIVLNQGAEFFIRLKEVGSIPSA 145 Query: 115 KVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPER--HIVQCNRAFTEMFGYC 172 +L + +A Q Q + +++ D +L + N Sbjct: 146 PPRFLRADASFAEAVAAMRQVTQEAVIIEYPDGGYGILTQRDVVRHLDSND--------- 196 Query: 173 ISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVY 232 + G L + A + L K R + Sbjct: 197 PDQPVGRLASRPLVTAKASASLYYARKLLAEKHIRHLG--------------------IT 236 Query: 233 DVLAHLQNLVMTFSDITEERQIR--------------------QLEGNILAAMCSSPPFH 272 L LV F+DI + Q ++ Sbjct: 237 SENNQLTGLVG-FADIMASIEHEYVHELQYALKERDEALNLSQQNLRLADKVFEATLEGI 295 Query: 273 EMGEIIC---RNIESVLNESHVSLFALRNGMPIHW--------ASSSHGAEIQNAQSWSA 321 + + + + + P ++ W Sbjct: 296 IITDAEGIIETVNPAFTRITGWRREEVVGKNPRILSSSQQPPEFYRHLWQSLREHGFWQG 355 Query: 322 TI--RQRDGAPAG---ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLI 376 + R++DG + + + +DI+Q ++ + + + L Sbjct: 356 EVINRRKDGKFYTEHLTITGIRGPDGTFTHYAGIFSDITQ--------RKLNEERLHYLA 407 Query: 377 QFDPMTGLPNRNNLHNYLDDLVDKA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLE 432 DP+T LPNR L L + +A + + +D + + D+LG+A D+ L Sbjct: 408 NHDPLTDLPNRTLLMERLGAALTRAHRQGKRVALMFLDLDRFKFINDTLGHAVGDKLLQT 467 Query: 433 VVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPL 491 V +R L+ + R+ G +F +V + D+ + Q A +L + V + +D + Sbjct: 468 VASRLTGSLRASDTVARLGGDEFNIVLEDIRDLRGVAQTAQKLIDRVQGMVTLDGHDVYV 527 Query: 492 TLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALK 549 T S+GI+ D G + L A AM ++ G N +QFF+ MN RL L + L Sbjct: 528 TASVGIAIYPDDGSTPEVLRMNADTAMYRAKERGKNNFQFFTADMNASTLARLRLESNLH 587 Query: 550 EAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGR 609 A++ + +L +QP++ G +YG+EAL RW G V P+ FIP+AEE I IG Sbjct: 588 RALARQEFQLHFQPKVDLAHGHIYGMEALLRWRSHELGPVSPADFIPIAEESNLISTIGE 647 Query: 610 WVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEIT 669 WV+ +ACRQ W + + ++VNLS+ + V + + GH L +EIT Sbjct: 648 WVLEQACRQARHWLNLGLLPGTVAVNLSSKQMTQGDIVATVRRILEHSNLPGHYLELEIT 707 Query: 670 ESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLT 729 ES+ M++ E+ + ++ L+ +GV +++DDFGTG+S LS L LP+ +KID+SFV Sbjct: 708 ESVAMDNTGEMIRTLKNLKALGVRIAIDDFGTGYSSLSYLKQLPIDVLKIDRSFVTDLHE 767 Query: 730 EKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPG 789 ++ A+ AI S+GQSLNL VAEGVE +E + L C+ QGY FSRP+PA + Sbjct: 768 DRDDAAIASAIISMGQSLNLQPVAEGVEREEHRQFLLDHGCQYGQGYLFSRPVPAATMEQ 827 Query: 790 WM 791 + Sbjct: 828 LL 829 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 68/212 (32%), Gaps = 3/212 (1%) Query: 48 KREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFAL 107 ++ +G + A Y R R G++ E + G + Sbjct: 196 DPDQPVGRLASRPLVTAKASASLYYARKLLAEKHIRHLGITSE--NNQLTGLVGFADIMA 253 Query: 108 SKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTE 167 S AL ++ R + +I+ D E I N AFT Sbjct: 254 SIEHEYVHELQYALKERDEALNLSQQNLRLADKVFEATLEGIIITDAEGIIETVNPAFTR 313 Query: 168 MFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKAS 227 + G+ E G P +L+ + P + L Q L + Q E + + G+ + Sbjct: 314 ITGWRREEVVGKNP-RILSSSQQPPEFYRHLWQSLREHGFWQGEVINRRKDGKFYTEHLT 372 Query: 228 ISPVYDVLAHLQNLVMTFSDITEERQIRQLEG 259 I+ + + FSDIT+ + + Sbjct: 373 ITGIRGPDGTFTHYAGIFSDITQRKLNEERLH 404 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 51/139 (36%), Gaps = 9/139 (6%) Query: 5 DADNAADGIFFPA---LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 +A N + A E + G ++ + + NPA ++ G++REEV+G N +L Sbjct: 272 EALNLSQQNLRLADKVFEATLEGIIITDAEGIIETVNPAFTRITGWRREEVVGKNPRILS 331 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYL 119 P ++ + E+ +KDG ++ + +Y Sbjct: 332 SSQQPPEFYRHLWQSLR----EHGFWQGEVINRRKDGKFYTEHLTITGIRGPDGTFTHYA 387 Query: 120 ALVRDASVEMAQKEQTRQL 138 + D + +E+ L Sbjct: 388 GIFSDITQRKLNEERLHYL 406 >UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacteria RepID=A2SDI4_METPP Length = 1006 Score = 780 bits (2016), Expect = 0.0, Method: Composition-based stats. Identities = 179/710 (25%), Positives = 306/710 (43%), Gaps = 42/710 (5%) Query: 119 LALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 A+ R+ +++ Q + + +D ER +V N A+ GY SE G Sbjct: 299 AAMERNRQHVHEIEDREAQFRTLYERTPVMMHSVDVERRLVAVNDAWLARLGYERSEVLG 358 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 + L R + + + + ++ ++TR+GE + ++ S D Sbjct: 359 RRSTEFLTAESRERAERSIIPRFMREGELRDMDYQMVTRSGEVLDVQISAIWETDAHGQP 418 Query: 239 QNLVMTFSDITEERQIRQLEGNILAAMCSSP----PFHEMGEIICR------NIESVLNE 288 + D+TE++++ + + + R E ++ Sbjct: 419 LRTLAVLKDVTEQKRLALELAAEKERIEVTLHSIGDGVISTDEAGRITYLNPVAEQMVGC 478 Query: 289 SHVSLFALRNGMPIHWASSSHGAEIQN------------AQSWSATIRQRDGAPAGI--- 333 L + GA + + SA +R R G G+ Sbjct: 479 LLAQARGLPFAQVVQLFDQESGAPLPSPVEQCLQDREVYGVRESAALRHRSGRDYGVQIS 538 Query: 334 LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNY 393 + D+++ Q + L D +TGLPNR + Sbjct: 539 AAPIAGRDGRVLGAVMVFQDVTEARGLA--------QKMSYLAHHDGLTGLPNRVLFQDR 590 Query: 394 LDDLV----DKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCR 449 + V + +DH + V DSLG+A D+ L V R L+ +CR Sbjct: 591 VHQACQSGRRHGRRFAVIFMDLDHFKHVNDSLGHAVGDELLKAVAQRLTGALRASDTICR 650 Query: 450 IEGTQFVLVSLEND---VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKN 504 + G +FV++ + D V + ++A ++ V++P ++ + S+GI+ G++ Sbjct: 651 LGGDEFVVLLSDLDDVEVDGVAEVAKKILRQVAQPCVLGGTEVNVGASLGIALFPGDGED 710 Query: 505 RDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQ 564 D L+ A AM ++ G N + FFS A+++ RL L A ++ A++ Q + YQP Sbjct: 711 PDTLMKRADAAMYRSKREGRNRYHFFSKAVDDAASARLQLEADMRRALAAGQFIVHYQPV 770 Query: 565 IFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRS 624 + T + +EAL RW G P+ FIP+AEE G I +G WV+ +AC QL W Sbjct: 771 VHGRTRDAVAVEALLRWDRAGQGLQSPAVFIPVAEESGLIVPMGHWVLRQACEQLRAWSG 830 Query: 625 QNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRI 684 + +++VN+S + + V+D +HA G+DG +L EITES +M+ + + Sbjct: 831 TALGGISVAVNVSPVQLAQADFVDTVADVLHATGVDGSRLEFEITESTLMQDPEATLEML 890 Query: 685 QILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIG 744 + L+ +GV +++DDFGTG+S L L PV +KID +FV + L+ AI ++ Sbjct: 891 RRLKGLGVRIAIDDFGTGYSSLGHLKRFPVDTLKIDHTFVRDLEADADDRELVRAILAMA 950 Query: 745 QSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 +SL L VVAEGVET+ Q +L + C QGY F+RP A W+ Sbjct: 951 RSLRLHVVAEGVETEAQAAILAAMECPAFQGYLFARPAGAAVTAAWLQDR 1000 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 97/261 (37%), Gaps = 15/261 (5%) Query: 9 AADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIG-NNIDMLIPRDLRP 67 + F E+ + ++ ++ N A GY+R EV+G + + L Sbjct: 313 DREAQFRTLYERTPVMMHSVDVERRLVAVNDAWLARLGYERSEVLGRRSTEFLTAESRER 372 Query: 68 AHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFAL--SKVSAEGKVYYLALVRDA 125 A I G+ R + Q+ + G + + + + + LA+++D Sbjct: 373 AERSIIPRFMREGELR----DMDYQMVTRSGEVLDVQISAIWETDAHGQPLRTLAVLKDV 428 Query: 126 SVEM----AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 + + + ++ + + + VI D I N +M G +++A G+ Sbjct: 429 TEQKRLALELAAEKERIEVTLHSIGDGVISTDEAGRITYLNPVAEQMVGCLLAQARGLPF 488 Query: 182 DTLLNIPEFP--ADNRIRLQQLLWKTARD--QDEFLLLTRTGEKIWIKASISPVYDVLAH 237 ++ + + A ++Q L ++ L R+G ++ S +P+ Sbjct: 489 AQVVQLFDQESGAPLPSPVEQCLQDREVYGVRESAALRHRSGRDYGVQISAAPIAGRDGR 548 Query: 238 LQNLVMTFSDITEERQIRQLE 258 + VM F D+TE R + Q Sbjct: 549 VLGAVMVFQDVTEARGLAQKM 569 Score = 68.9 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 49/160 (30%), Gaps = 9/160 (5%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNID--- 58 +L A L G + +E + + NP AE++ G + G Sbjct: 433 RLALELAAEKERIEVTLHSIGDGVISTDEAGRITYLNPVAEQMVGCLLAQARGLPFAQVV 492 Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKV 116 L ++ P + + V G+ L + G + + + + + Sbjct: 493 QLFDQESGAPLPSPVEQCLQD--REVYGVRESAALRHRSGRDYGVQISAAPIAGRDGRVL 550 Query: 117 YYLALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDP 154 + + +D + ++ L + L V+ D Sbjct: 551 GAVMVFQDVTEARGLAQKMSYLAHHDGLTGLPNRVLFQDR 590 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 780 bits (2015), Expect = 0.0, Method: Composition-based stats. Identities = 175/760 (23%), Positives = 305/760 (40%), Gaps = 81/760 (10%) Query: 99 SKIWTRFALSKVSAEGKVYYLALVRDASVEMAQ---KEQTRQLIIAVDHLDRPVIVLDPE 155 I + +A K+ E +V+ + L ++ + + + + Sbjct: 31 QTIPSDYAAKKMIHELQVHQIELEMQNEELKQARIAEKLHYRYTELFEFAPIGYFSFNLK 90 Query: 156 RHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLL 215 I Q N + + G Q L + NR + + + + Sbjct: 91 GVINQVNLRGASLLDIERANLVGKQFSNCLTAQDRNKFNRCLAKAFAGDGIQSFEVLAQV 150 Query: 216 TRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLE----------------- 258 + + I+A++ + + + DIT+ ++ + Sbjct: 151 GKHKCWLNIEANL-GITETD-----CLAAVIDITDRKRADEELLFQNDEKGKRTDELVIA 204 Query: 259 --------------------GNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRN 298 + + I R ++ N S S + Sbjct: 205 NKELFFQNAEKEKRVGELRVAATVFETQEGMFVTDANLCILRVNKAFTNISGYSGEEVIG 264 Query: 299 GMPIHWASSS--------HGAEIQNAQSWSATI--RQRDGAPAG---ILQIKTSSGAETS 345 P + S I +W + R + G + S Sbjct: 265 QSPKLFNSGRQDKAFYKEMWNSINTTDAWRGEVSNRSKSGDIYAKNLTITAVRDGKGVVS 324 Query: 346 AFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV----DKA 401 ++ DI+ + + + I L FDP+T LPNR L + L ++ Sbjct: 325 NYVATFRDITTS--------KAASEKINNLAYFDPLTQLPNRRMLLDSLRHVLTISARSN 376 Query: 402 VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE 461 + + +D+ + + D+LG+ D L +V R + ++ + R+ G +FV++ Sbjct: 377 QHCALLFLDLDNFKTLNDTLGHDVGDLLLQQVATRLTDCVREGDIVARLGGDEFVVLLEN 436 Query: 462 NDVSNITQIADE------LRNVVSKPIMIDDKPFPLTLSIGISYDLGKN--RDYLLSTAH 513 + I + +++ ++ + T SIG++ G + LL A Sbjct: 437 LSLQAIEAANKAKKVAKKIIFELAQYYQLNMHRYHSTTSIGVTIFSGNETGIEELLKQAD 496 Query: 514 NAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELY 573 AM + G N W FF+ M E + R + L++AI +NQ +L YQ Q+ +G+ Sbjct: 497 IAMYQSKAAGRNTWHFFNKTMQESIIARADMERDLRKAIEDNQFQLHYQAQVS-SSGQTL 555 Query: 574 GIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIH-IPAL 632 G EAL RW P G V P FIPLAEE G I IG+WV+ AC QL W+ + L Sbjct: 556 GAEALIRWQHPERGQVSPFNFIPLAEETGLILPIGQWVLDSACAQLKAWQKNPLTQDLVL 615 Query: 633 SVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGV 692 +VN+SA QV + I+ +L +E+TESM++E+ ++I ++ IL +G+ Sbjct: 616 AVNISAKQLHQEDFVEQVKATLKRHDINPARLKLELTESMLVENISDIITKMNILSKIGI 675 Query: 693 GLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVV 752 S+DDFGTG+S L L LP+ +IKID+SFV +T+ A++ I ++ SL+++V+ Sbjct: 676 SFSLDDFGTGYSSLQYLKKLPLNQIKIDQSFVRDLITDASDRAIVRTIITMSHSLDISVI 735 Query: 753 AEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 AEGVET E+ + L C QGY FS+P+P E + Sbjct: 736 AEGVETVEERQYLLDNGCTHYQGYLFSKPVPINEFEVLLK 775 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 43/294 (14%), Positives = 82/294 (27%), Gaps = 47/294 (15%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 ++ + + + E +G N + N L +R ++G + Sbjct: 64 RIAEKLH---YRYTELFEFAPIGYFSFNLKGVINQVNLRGASLLDIERANLVGKQFSNCL 120 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLAL 121 R + G + + ++ + K W + E + Sbjct: 121 TAQDRNKFNRCLAKAFAGDGIQSFEVLAQV-GKHK----CWLNIEANLGITETDCLAAVI 175 Query: 122 VRDASVEMAQKE-----------------------------------QTRQLIIAVDHLD 146 D + E + R + Sbjct: 176 --DITDRKRADEELLFQNDEKGKRTDELVIANKELFFQNAEKEKRVGELRVAATVFE-TQ 232 Query: 147 RPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTA 206 + V D I++ N+AFT + GY E G P L N + + T Sbjct: 233 EGMFVTDANLCILRVNKAFTNISGYSGEEVIGQSP-KLFNSGRQDKAFYKEMWNSINTTD 291 Query: 207 RDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGN 260 + E +++G+ +I+ V D + N V TF DIT + + N Sbjct: 292 AWRGEVSNRSKSGDIYAKNLTITAVRDGKGVVSNYVATFRDITTSKAASEKINN 345 Score = 92.7 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 51/379 (13%), Positives = 105/379 (27%), Gaps = 53/379 (13%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 + + + G + + N ++ N A + GY EEVIG + + Sbjct: 214 EKEKRVGELRVAATVFETQEGMFVTDANLCILRVNKAFTNISGYSGEEVIGQSPKLFNSG 273 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLAL 121 A + + ++ A E+ K G ++ V V Y+A Sbjct: 274 RQDKAFYKEMWNSINTTDA----WRGEVSNRSKSGDIYAKNLTITAVRDGKGVVSNYVAT 329 Query: 122 VRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIVQC----NRAFTEMFG----- 170 RD + A E+ L + L ++LD RH++ N+ +F Sbjct: 330 FRDITTSKAASEKINNLAYFDPLTQLPNRRMLLDSLRHVLTISARSNQHCALLFLDLDNF 389 Query: 171 YCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIK---AS 227 +++ G LL RL + + ++ G++ + S Sbjct: 390 KTLNDTLGHDVGDLLL-----QQVATRLTDCVREGD------IVARLGGDEFVVLLENLS 438 Query: 228 ISPVYDVLAHLQNLVMTFSDITEERQIRQLEGN----------------ILAAMCSSPPF 271 + + + ++ + Q+ + I + + Sbjct: 439 LQAIEAANKAKKVAKKIIFELAQYYQLNMHRYHSTTSIGVTIFSGNETGIEELLKQADIA 498 Query: 272 HEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPA 331 + RN N++ R M + + Q G Sbjct: 499 MYQSKAAGRNTWHFFNKTMQESIIARADMERDLRKAIEDNQFQLHYQAQV---SSSGQTL 555 Query: 332 GILQIKT---SSGAETSAF 347 G + + S F Sbjct: 556 GAEALIRWQHPERGQVSPF 574 >UniRef50_A4ACX6 Sensory box/GGDEF/EAL family protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4ACX6_9GAMM Length = 793 Score = 780 bits (2015), Expect = 0.0, Method: Composition-based stats. Identities = 181/803 (22%), Positives = 347/803 (43%), Gaps = 42/803 (5%) Query: 16 PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEV-IGNNIDMLIPRDLRPAHPEYIR 74 + +G + + + + + +E+ +G I + + Sbjct: 6 AVFLEAGIGTWRWDASSGEFQLSDDGIAMLQVRADELPLG---VDTIIGQILDEDVAGFQ 62 Query: 75 HNREGGKARVEGMSRELQLEKKDGSKIWTRFALS--KVSAEGKVYYLALVRDASVEMAQK 132 + + + DG W R + ++ D + + + + Sbjct: 63 SAMAELITAPGLIEVDFRALLDDGDIRWYRAIGRSYASPDASVTHAAGVLLDVTTQRSAE 122 Query: 133 EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPA 192 + + +V + I N A+ + G+ +E G L++ + A Sbjct: 123 Q---YYDAFFQQPNGMHLVASIDGEIRLTNSAWQLVLGHGDAELQGQNLLDLVHPEDREA 179 Query: 193 DNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER 252 + +L E R G I S + + DI++E Sbjct: 180 -TLAEMGKLSQGMYTLYFENRYRHRDGSYRVIAWSAATAERES----VICAVGRDISQEH 234 Query: 253 QIRQLEGNILAAMCSSPPFHEMGEIICR------NIESVLNESHVSLFA-----LRNGMP 301 R+ A +S + + R + S LR+G Sbjct: 235 AARRGLFQAAAVFKNSGEGILISDKDGRIRDVNAAFSRITGYSREDAIGQPTSLLRSGRH 294 Query: 302 IHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQIKTSSGAETSAFIERVADISQHMA 359 + +Q W I R++ G L + F+ DISQ Sbjct: 295 DGDFYADMWQTLQRDGVWRGEIWNRRKSGTVFPELLTISKIDGPDGGFMAIFTDISQ--- 351 Query: 360 ALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQ 415 +++ + +++L +DP+T LPNR ++ L+ + +A V+ + +D + Sbjct: 352 -----LKETEEQLQKLAHYDPLTNLPNRFLVNECLEHSIRRAQRRSDHLAVFFLDIDSFK 406 Query: 416 DVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEND-VSNITQIADEL 474 ++ DSLG+ D+ L NR + L+ D + RI G +F++V + + T IA+++ Sbjct: 407 NINDSLGHFAGDKLLKTTANRLKALLRDDDSVGRIGGDEFLMVLDDISTPDDATHIAEKI 466 Query: 475 RNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSP 532 + KP++++ + ++ SIGIS G+ + L+S A AM + G + ++F+S Sbjct: 467 IGALRKPMILEGRSISVSASIGISIYPEDGQTAETLMSNADAAMYNAKDQGRDTFRFYSE 526 Query: 533 AMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPS 592 + + +++ +AL+EA+S + +L +QPQ+ + G L G+E L RWH G V PS Sbjct: 527 HLTRQAFQNVLIDSALREAVSRQEFRLAFQPQVNTDNGSLLGLEVLLRWHHLTLGTVSPS 586 Query: 593 RFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSD 652 +FIP AE G I +IG WV+ ++C Q + W ++ + L+VN+SA FR+ QV Sbjct: 587 QFIPQAERTGLIRDIGHWVLEQSCLQGSRWIAEGLQFGHLAVNVSAPQFRAEDFVAQVRK 646 Query: 653 AMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSL 712 + +L +E+TES+++ ++ + + LR +GV ++DDFGTG+S LS L + Sbjct: 647 VLADTEFPPEKLELELTESVLVHDTEKLIENMHELRALGVMFAIDDFGTGYSSLSYLKRM 706 Query: 713 PVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRV 772 P+ +K+DKSFVD +++ + A+ ++G+++ L V+AEG+E + Q +L+ + C+ Sbjct: 707 PIDRLKLDKSFVDHIVSDDSDRIIAGAVLALGKAMGLPVIAEGIEQEAQARVLQSLGCKH 766 Query: 773 IQGYFFSRPLPAEEIPGWMSSVL 795 QGY + RP+ I + + L Sbjct: 767 FQGYLYGRPMYGPRIEVVLRAHL 789 Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 97/257 (37%), Gaps = 11/257 (4%) Query: 8 NAADGIFFPALEQNMMGA-VLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 + ++ A Q G ++ + + E+ N A + + G+ E+ G N+ L+ + R Sbjct: 118 QRSAEQYYDAFFQQPNGMHLVASIDGEIRLTNSAWQLVLGHGDAELQGQNLLDLVHPEDR 177 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDAS 126 A + +G + E + +DGS ++ + E + + RD S Sbjct: 178 EATLAEMGKLSQGM----YTLYFENRYRHRDGSYRVIAWSAATAERESVICAVG--RDIS 231 Query: 127 VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 E A + Q + +++ D + I N AF+ + GY +A G P +LL Sbjct: 232 QEHAARRGLFQAAAVFKNSGEGILISDKDGRIRDVNAAFSRITGYSREDAIGQ-PTSLLR 290 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 D + Q L + + E ++G +IS + + F+ Sbjct: 291 SGRHDGDFYADMWQTLQRDGVWRGEIWNRRKSGTVFPELLTISKIDGPDG---GFMAIFT 347 Query: 247 DITEERQIRQLEGNILA 263 DI++ ++ + + Sbjct: 348 DISQLKETEEQLQKLAH 364 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 9/154 (5%) Query: 2 KLTDADNAADGIFFPA--LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDM 59 ++ A G+F A + + G ++ +++ + N A ++ GY RE+ IG + Sbjct: 229 DISQEHAARRGLFQAAAVFKNSGEGILISDKDGRIRDVNAAFSRITGYSREDAIGQPTSL 288 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL 119 L + + R E+ +K G+ +SK+ ++ Sbjct: 289 LRSGRHDGDFYADMWQTLQ----RDGVWRGEIWNRRKSGTVFPELLTISKIDGPDG-GFM 343 Query: 120 ALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIV 151 A+ D S +EQ ++L + +L +V Sbjct: 344 AIFTDISQLKETEEQLQKLAHYDPLTNLPNRFLV 377 >UniRef50_A0YYE8 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YYE8_9CYAN Length = 990 Score = 779 bits (2012), Expect = 0.0, Method: Composition-based stats. Identities = 167/684 (24%), Positives = 296/684 (43%), Gaps = 26/684 (3%) Query: 127 VEMAQKEQTRQLIIAVDHLDRPVIVLDP---ERHIVQCNRAFTEMFGYCISEASGMQPDT 183 +E L A++ + +I+ DP + I+ N A GY SE G Sbjct: 314 ERHRSEEYLHLLERAINSANNGIIITDPHQPDNPIIYFNTAVEHSTGYPASEIMGKNC-R 372 Query: 184 LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVM 243 L + ++ + + G W + ISPV++ L N + Sbjct: 373 FLQGKDRNQPEINIIRAAISAKKECNVVLRNYRKDGSLFWNELFISPVFNNKGKLTNFIG 432 Query: 244 TFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIH 303 DI+E ++ + +I NI ++ +++ L + Sbjct: 433 IQKDISERKRSEANLKKSQERLK-KIVSAISDALIVININGLIKFVNLAAEVLFDRSESF 491 Query: 304 WASSSHGAEIQNAQSWSATIRQRDGAPAGIL--QIKTSSGAETSAFIERVADISQHMAAL 361 G + TI Q G + ++ E + + + DI+ Sbjct: 492 LIGYPIGNFLLEEDKIELTIVQPKGKLVFVEIRSVEIDWEGEKATLVS-LRDIT------ 544 Query: 362 ALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV-----SPVVYLIGVDHIQD 416 E++++ + + +D +T LPNR + L+ + + S V + +D + Sbjct: 545 --ERKQAEEQLRHSAFYDALTNLPNRALFMDQLEQAITQTKTLNQTSFAVVFLDLDSFKF 602 Query: 417 VIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVS-LENDVSNITQIADELR 475 V +SLG+ DQ L+ + +R L+ L R+ G +F + VS + ++ Sbjct: 603 VNESLGHIIGDQLLIAIADRLETCLRSGDILARLGGDEFTFLLKDIEQVSQAITVVQNIQ 662 Query: 476 NVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPA 533 + ++ P + S+GI+ + +L A AM ++ G N + F+ Sbjct: 663 HKLTFPFDLSSHQLFSNASLGIALISPDYTYPEEVLRDADIAMYSAKQRGKNCYAIFNSQ 722 Query: 534 MNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSR 593 M + + RL L L+ A + YQP + +T ++ G EAL RW G + P + Sbjct: 723 MRKKSQHRLQLETDLRYAWEQQDFLVYYQPIVCLQTHQIVGFEALIRWQHLTKGLISPYQ 782 Query: 594 FIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN--IHIPALSVNLSALHFRSNQLPNQVS 651 FIP+AEE G I +G WV+ AC QL W N + +SVNLS+ + +++ Sbjct: 783 FIPVAEETGLIIELGSWVLKTACHQLKAWTRTNPRMQHLKMSVNLSSRQIQDYNFVKKIN 842 Query: 652 DAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVS 711 M I+ L +EITES++ME+ ++ +++ +R + LS+DDFGTG+S LS L + Sbjct: 843 QVMTETQINPQNLKLEITESILMENPEDVKEKLIQIRSQNIQLSLDDFGTGYSSLSYLHN 902 Query: 712 LPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCR 771 P+ +KID+SF+ R A+++AI ++ +L + V+AEG+ET E + L+ + C Sbjct: 903 FPINTLKIDRSFIVRMNLNPENTAIVQAIITLAHTLGMDVIAEGIETVEHLKHLQALECE 962 Query: 772 VIQGYFFSRPLPAEEIPGWMSSVL 795 QGY FS+P+ A E + S Sbjct: 963 YGQGYLFSKPVSAIEADKLLESQQ 986 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 47/274 (17%), Positives = 94/274 (34%), Gaps = 37/274 (13%) Query: 1 MKLTDADNAADG---IFFPALEQNMMGAVLINE---NDEVMFFNPAAEKLWGYKREEVIG 54 + + + ++ + A+ G ++ + ++ +++FN A E GY E++G Sbjct: 309 LAMAVERHRSEEYLHLLERAINSANNGIIITDPHQPDNPIIYFNTAVEHSTGYPASEIMG 368 Query: 55 NNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEG 114 N L +D IR K + L+ +KDGS W +S V Sbjct: 369 KNCRFLQGKDRNQPEINIIRAAISAKKEC----NVVLRNYRKDGSLFWNELFISPVFNNK 424 Query: 115 K--VYYLALVRDASVEMAQK----EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEM 168 ++ + +D S + + +L V + +IV++ I N A + Sbjct: 425 GKLTNFIGIQKDISERKRSEANLKKSQERLKKIVSAISDALIVININGLIKFVNLAAEVL 484 Query: 169 FGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASI 228 F S G L + + E ++ G+ ++++ Sbjct: 485 FDRSESFLIGYPIGNFLLEED-------------------KIELTIVQPKGKLVFVEIRS 525 Query: 229 SPVYDVLAHLQNLVMTFSDITEERQIRQLEGNIL 262 + D LV DITE +Q + + Sbjct: 526 VEI-DWEGEKATLVS-LRDITERKQAEEQLRHSA 557 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 54/444 (12%), Positives = 128/444 (28%), Gaps = 89/444 (20%) Query: 16 PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRH 75 + + + N NPA E + GY +++ + D + A + Sbjct: 33 SLFMLSPDLVGITDFNGYFKEVNPAFESILGYTAGQLLAQPWIEYVHPDDQNATLQAFEQ 92 Query: 76 NREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQT 135 + ++ E + +D S + + VY A+ RD +++ + Q Sbjct: 93 LL----NQEPIINFENRFRCQDNSYKYLSWTAIADLENNLVY--AVARDITMQKHTETQL 146 Query: 136 R---QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCI---SEASGMQPD---TLLN 186 R + AV L + + + ++F + +E ++ LL Sbjct: 147 RWRVRQQAAVAQLGQLALEKTIDVDKTNF---LEQLFQQSVKMTAEILDVEYSKILQLLP 203 Query: 187 IPEFPADNRIRLQQL--LWKTARDQDEFLLL-------------------TRTGEKIWIK 225 + + T ++ E + G + + Sbjct: 204 DNHHFLIIAGLGWEAGLIETTTVEKGENTHVGYTLLQNEPVVVENLQAETRFNGSSL-LH 262 Query: 226 AS-----ISPVYDVLAHLQNLVMTFS---------DIT-------------EERQIRQLE 258 IS V + ++ S DI E + + Sbjct: 263 EHEIISGISVVIGSRKNPFGVLAVHSKKQRQFSTDDINFLQAIANILAMAVERHRSEEYL 322 Query: 259 GNILAAMCSSPPFHEMGE---------IICRNIESVLNESHVSLFA-----LRNGMPIHW 304 + A+ S+ + + +E + L+ Sbjct: 323 HLLERAINSANNGIIITDPHQPDNPIIYFNTAVEHSTGYPASEIMGKNCRFLQGKDRNQP 382 Query: 305 ASSSHGAEIQNAQSWSATIR--QRDGAPAG---ILQIKTSSGAETSAFIERVADISQHMA 359 + A I + + +R ++DG+ + ++ + + FI DIS+ Sbjct: 383 EINIIRAAISAKKECNVVLRNYRKDGSLFWNELFISPVFNNKGKLTNFIGIQKDISERKR 442 Query: 360 ALALEQEKSRQHIEQL--IQFDPM 381 + A +KS++ ++++ D + Sbjct: 443 SEAN-LKKSQERLKKIVSAISDAL 465 Score = 78.9 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 42/263 (15%), Positives = 79/263 (30%), Gaps = 63/263 (23%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + + + ++IN N + F N AAE L+ +IG I + Sbjct: 442 RSEANLKKSQERLKKIVSAISDALIVININGLIKFVNLAAEVLFDRSESFLIGYPIGNFL 501 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLAL 121 + + EL + + G ++ ++ EG+ L Sbjct: 502 LEEDK----------------------IELTIVQPKGKLVFVEIRSVEIDWEGEKATLVS 539 Query: 122 VRDASVEMAQKEQTRQ--LIIAVDHLDR-----------------------PVIVLDPER 156 +RD + +EQ R A+ +L V+ LD + Sbjct: 540 LRDITERKQAEEQLRHSAFYDALTNLPNRALFMDQLEQAITQTKTLNQTSFAVVFLDLDS 599 Query: 157 HIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLT 216 N + + G D LL + +R +L + D EF L Sbjct: 600 -FKFVNESLGHIIG-----------DQLLIAIADRLETCLRSGDILARLGGD--EFTFLL 645 Query: 217 RTGEKIWIKASISPVYDVLAHLQ 239 + + +I+ V ++ L Sbjct: 646 KD--IEQVSQAITVVQNIQHKLT 666 Score = 74.3 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 44/139 (31%), Gaps = 8/139 (5%) Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 + E + E L + V + D + + N AF + GY + Sbjct: 21 ITKEKSIDEIQNSLFML---SPDLVGITDFNGYFKEVNPAFESILGYTAGQLLAQPWIEY 77 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 ++ + A + +QLL + E + ++ + + D+ +L Sbjct: 78 VHPDDQNATLQA-FEQLLNQEPIINFENRFRCQDNSYKYLSWTA--IADLENNLVY--AV 132 Query: 245 FSDITEERQIRQLEGNILA 263 DIT ++ + Sbjct: 133 ARDITMQKHTETQLRWRVR 151 >UniRef50_B8DSE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DSE5_DESVM Length = 1251 Score = 778 bits (2011), Expect = 0.0, Method: Composition-based stats. Identities = 202/867 (23%), Positives = 358/867 (41%), Gaps = 78/867 (8%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNN------ 56 + D + A ++ ++++ + V+ +N A E++ G+ E++G Sbjct: 336 MQDQLSEAWRRLRDIIDFLPDAVLVLDASRRVIAWNRAMEEMTGHSASEMLGRGNFAYAL 395 Query: 57 ---------IDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFAL 107 + P Y R + G K E L + G+ +WT + Sbjct: 396 PFYGERIPLLGDWFFSPDMPQPSHYTRFSEHGDKLAAEAYVPTLFGGR--GAHVWTVASA 453 Query: 108 SKVSAEGKVYYLALVRDASVE----MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNR 163 + + +RD + ++ ++ +A+ + + + + + + + Sbjct: 454 LRDGEGRLNGVIQTIRDITERHNQMRELEKSRQRYDMAISATNDGIWEWELDTNTLYHSP 513 Query: 164 AFTEMFGYCISEASG-MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKI 222 E+ G M +L+ + + R + EF + G Sbjct: 514 RCLEILGRAPDATLSPMAIAAILHPEDRLRVLTEVRRITGEDAERFEHEFRIRHTDGTWR 573 Query: 223 WIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNI 282 W+ A + L + +DIT+ +Q + G + + ++ E+ Sbjct: 574 WVLARGAARRGPGGRLNRVAGALADITDHKQGDAIAGILFHIANAINETRDLDELFLSIH 633 Query: 283 ESV-------------------------------LNESHVS-----------LFALRNGM 300 ++ + V L +R G Sbjct: 634 TALRRHVQAPNFFIALINEPEDRLDFAYFADERDARYNPVEHISDPAVQSPTLEVIRTGR 693 Query: 301 PIHWASSSHGAEI---QNAQSWSATIRQRDGAPAGILQIKTSSGAET-SAFIERVADISQ 356 +H S A +W T + G G + ++ +E SA + Sbjct: 694 QVHLHSDDIEARPVFGSRPAAWLGTPLRSRGKVIGAMVVQHYEDSEFFSARDAELMVPVA 753 Query: 357 HMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS-----PVVYLIGV 411 A+A+E+++ + + L DP+TGLPNR L + ++ + + V ++ + Sbjct: 754 EQVAVAIERKQGEEMLTHLALHDPLTGLPNRALLLDRIERAIQRRRRNDSYRFAVLMLDL 813 Query: 412 DHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEND-VSNITQI 470 D + + DS G+ D L+EV R R ++ + R+ G +F L+ + D I QI Sbjct: 814 DRFKFINDSHGHTTGDNLLVEVARRMRPVVRAGDTVARLGGDEFALLLEDVDSPRRIVQI 873 Query: 471 ADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQ 528 L + +P+ + K + SIG+ D LL A AM + G ++ Sbjct: 874 TRRLLAALERPVRMGAKVVRTSASIGMVLRTQGYDTADALLRDADIAMYQAKAQGKGRFR 933 Query: 529 FFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGH 588 F+ +M+ E + L L A+ QL L YQP + + L G EAL RW P G Sbjct: 934 VFNQSMHRHTMEMMTLEGDLSMAMRRKQLYLEYQPVLAVDGARLLGFEALVRWRHPTEGA 993 Query: 589 VPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ--NIHIPALSVNLSALHFRSNQL 646 VPP+RFIP+AEE G I IG+WV+ +A LA WR+ H +SVNLSA L Sbjct: 994 VPPARFIPMAEETGLILRIGQWVLEQAAATLARWRATLPGAHDLYVSVNLSARQASQPNL 1053 Query: 647 PNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGL 706 +V+ + G+ L +EITE+ +M+ +R++ LR +GVG+ +DDFGTG+S L Sbjct: 1054 TGRVARILSDTGLPPEALKLEITETAIMKDPDGALQRLEALRRLGVGIGIDDFGTGYSSL 1113 Query: 707 SRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLR 766 + L PV +K+D+SFV + ++ + ++G+SL L VVAEGVET EQF ++ Sbjct: 1114 AYLQRFPVDTLKVDRSFVSAVAGDAENREIVRTVVTLGRSLGLHVVAEGVETAEQFAIVA 1173 Query: 767 KIHCRVIQGYFFSRPLPAEEIPGWMSS 793 ++ C +QGY FSRP+ E ++++ Sbjct: 1174 ELGCHSVQGYHFSRPVAEERAVAFIAA 1200 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 71/442 (16%), Positives = 131/442 (29%), Gaps = 85/442 (19%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + D D A + + +G + NP ++WG E + + + Sbjct: 172 QAVDLDRAREQ-YHAIFTNAPVGIFRVTPEGRYENVNPEYARIWGCPTTEEMLECVSDI- 229 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL-- 119 A+P + +A EL+L+++DGS W + V Sbjct: 230 -PRQMYANPADRQRFVGALQATGRVDRMELRLKRRDGSLFWGLVSARLVRGPAPAQAAQT 288 Query: 120 ------------------------------------ALVRDASVEMAQKEQT----RQLI 139 V D + + A ++Q R+L Sbjct: 289 GQIAKTGQTAGTGVTNGTYRADAKAGNAPAEVDYIDGFVLDITEQKAMQDQLSEAWRRLR 348 Query: 140 IAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ---------------PDTL 184 +D L V+VLD R ++ NRA EM G+ SE G Sbjct: 349 DIIDFLPDAVLVLDASRRVIAWNRAMEEMTGHSASEMLGRGNFAYALPFYGERIPLLGDW 408 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTR-TGEKIWIKASISPVYDVLAHLQNLVM 243 P+ P + + + E + T G + S + D L ++ Sbjct: 409 FFSPDMPQPSHYT--RFSEHGDKLAAEAYVPTLFGGRGAHVWTVASALRDGEGRLNGVIQ 466 Query: 244 TFSDITEE----RQIRQLEGNILAAMCSSPPFHEMGEI--------------ICRNIES- 284 T DITE R++ + A+ ++ E+ + R ++ Sbjct: 467 TIRDITERHNQMRELEKSRQRYDMAISATNDGIWEWELDTNTLYHSPRCLEILGRAPDAT 526 Query: 285 VLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGIL---QIKTSSG 341 + + ++ + + + E IR DG +L + G Sbjct: 527 LSPMAIAAILHPEDRLRVLTEVRRITGEDAERFEHEFRIRHTDGTWRWVLARGAARRGPG 586 Query: 342 AETSAFIERVADISQHMAALAL 363 + +ADI+ H A+ Sbjct: 587 GRLNRVAGALADITDHKQGDAI 608 Score = 80.8 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 74/317 (23%), Gaps = 72/317 (22%) Query: 126 SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 + + Q + + + PE N + ++G +E + Sbjct: 171 TQAVDLDRAREQYHAIFTNAPVGIFRVTPEGRYENVNPEYARIWGCPTTEEMLECVSDIP 230 Query: 186 NIPEFPADNRIRLQQLLWKTAR-DQDEFLLLTRTGEKIWIKASISPVY------------ 232 +R R L T R D+ E L R G W S V Sbjct: 231 RQMYANPADRQRFVGALQATGRVDRMELRLKRRDGSLFWGLVSARLVRGPAPAQAAQTGQ 290 Query: 233 ------------------------DVLAHLQNLVMTFSDITEERQIRQLE----GNILAA 264 + A + + DITE++ ++ + Sbjct: 291 IAKTGQTAGTGVTNGTYRADAKAGNAPAEVDYIDGFVLDITEQKAMQDQLSEAWRRLRDI 350 Query: 265 MCSSPPFHEMGE------IICRNIESVLNESHVSLFALRNGMPIHWASS----------- 307 + P + + R +E + S + N Sbjct: 351 IDFLPDAVLVLDASRRVIAWNRAMEEMTGHSASEMLGRGNFAYALPFYGERIPLLGDWFF 410 Query: 308 --------------SHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVAD 353 HG ++ R + + I+ + D Sbjct: 411 SPDMPQPSHYTRFSEHGDKLAAEAYVPTLFGGRGAHVWTVASALRDGEGRLNGVIQTIRD 470 Query: 354 ISQHMAALALEQEKSRQ 370 I++ + ++ ++ Sbjct: 471 ITERHNQMRELEKSRQR 487 >UniRef50_C1DCZ4 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCZ4_LARHH Length = 759 Score = 778 bits (2010), Expect = 0.0, Method: Composition-based stats. Identities = 184/686 (26%), Positives = 307/686 (44%), Gaps = 31/686 (4%) Query: 125 ASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 S ++ Q ++ + +L E ++ N+ +EM GY +G L Sbjct: 71 RSQRSELRDLRAQYDALIEQSLVGIYIL-KEHTLIYANQRASEMLGYPAGALAGKSLVDL 129 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 + ++ L+ R G ++ ++ + + +V Sbjct: 130 MPPGVAHEIGESVRRRHRDNITEQHYVLPLIHRNGHRLSVELHSR-LTEFRGERV-IVGV 187 Query: 245 FSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESHVSLFALRN 298 DI+ + + +S + + + + + R+ Sbjct: 188 GLDISARLETERTLQLAATVFENSSEGILLTDADGTLITVNPAFTRITGYTEEQALGRRS 247 Query: 299 GMPIHWASSS-----HGAEIQNAQSWSATI--RQRDGAPAGILQIKTS--SGAETSAFIE 349 M + W + R RDG + ++ S ++ Sbjct: 248 RMFRTDHVGQATNMQMMQSLAEHGHWQGEMFDRHRDGRLYPVWLSLSAVYDEDRVSNYVG 307 Query: 350 RVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA--VSPVVY 407 DIS+ ++ + + L DP+T L NR+ L L+D+ S V Sbjct: 308 VFTDISR--------RKAAEDRLVFLASHDPLTRLLNRDALFRKLEDICLSGIEQSFAVL 359 Query: 408 LIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNI 467 I +D + + DS G+A D L V R + + L R G +F L+ + Sbjct: 360 FIDLDRFKLINDSFGHATGDNLLRIVAARLSFVVGSNALLARQGGDEFTLLLEDTGQRTA 419 Query: 468 -TQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGG 524 +A+ L + +S+PI ++++ +T SIGI+ + GK+ LL A A+ + G Sbjct: 420 VIDMANRLLDELSQPITLENQELHITASIGIALAPEHGKDAATLLRHADTALYRAKDAGK 479 Query: 525 NGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDP 584 N + FF+ ++ + +RL L AL+ A+ NQL L YQPQI L G+E L RWH P Sbjct: 480 NTFAFFTHTLHGLSNQRLALENALRHALPRNQLTLAYQPQIDPHRQRLVGVEVLLRWHHP 539 Query: 585 LHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSN 644 G V P+ FIPLAEE G I IGRWV+ ACRQLA W + + ++VNLSA F Sbjct: 540 ELGQVSPATFIPLAEETGLILPIGRWVLETACRQLAAWDTAGFSVGHVAVNLSAHQFNDP 599 Query: 645 QLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFS 704 L + + + G+ +L +E+TES ++ + T + L+++GV LS+DDFGTG+S Sbjct: 600 GLTHHLKAVLSDSGLAARRLELEVTESTLINNPTAAIALMTELKELGVRLSIDDFGTGYS 659 Query: 705 GLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEM 764 L++L P+ +KID++FV + LA+ EAI ++ + L+L+VVAEGVET +Q + Sbjct: 660 SLAQLKRFPLDTLKIDRTFVSGIPADASDLAITEAIIAMAKKLSLSVVAEGVETADQRDF 719 Query: 765 LRKIHCRVIQGYFFSRPLPAEEIPGW 790 L + +IQGYF+S PL AE + + Sbjct: 720 LARCGSELIQGYFYSPPLAAEALHSF 745 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 96/252 (38%), Gaps = 6/252 (2%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 + +EQ+++G ++ + +++ N A ++ GY + G ++ L+P + Sbjct: 77 LRDLRAQYDALIEQSLVGIYIL-KEHTLIYANQRASEMLGYPAGALAGKSLVDLMPPGVA 135 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDAS 126 E +R + + L L ++G ++ G+ + + D S Sbjct: 136 HEIGESVRR---RHRDNITEQHYVLPLIHRNGHRLSVELHSRLTEFRGERVIVGVGLDIS 192 Query: 127 VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 + + + ++ +++ D + ++ N AFT + GY +A G + + Sbjct: 193 ARLETERTLQLAATVFENSSEGILLTDADGTLITVNPAFTRITGYTEEQALGRR-SRMFR 251 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 +++ Q L + Q E R G + S+S VYD + N V F+ Sbjct: 252 TDHVGQATNMQMMQSLAEHGHWQGEMFDRHRDGRLYPVWLSLSAVYDED-RVSNYVGVFT 310 Query: 247 DITEERQIRQLE 258 DI+ + Sbjct: 311 DISRRKAAEDRL 322 >UniRef50_C6NZF1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZF1_9PROT Length = 995 Score = 778 bits (2010), Expect = 0.0, Method: Composition-based stats. Identities = 183/727 (25%), Positives = 326/727 (44%), Gaps = 45/727 (6%) Query: 101 IWT-RFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIV 159 W +LS V G V + + A +E +L +DH + ++ + Sbjct: 276 FWLYMISLSLV---GVVLESTIRQHRRDGDALRESESRLHAILDHAPVGIWLVGKDGRYQ 332 Query: 160 QCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTG 219 N+ F + G S L + A Q L + L G Sbjct: 333 FVNKRFCDATGIPESAFLATTHLPDLMGEQIAAACLASDQACLSQDEPYVSVETLPLVDG 392 Query: 220 EKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNI--LAAMCSSPPFHEMGEI 277 + ++ + + + D + + D+T Q + + + + Sbjct: 393 KLHQLEVTKAQLRDSNGEVIGAIGISVDVTGRNQAEEALRESEARWSFALEGGGDCVWDW 452 Query: 278 ICRNIESVLNESHVSLFALRNGMP----IHWASSSHGAEIQN------------AQSWSA 321 N E L++ +F + W + H +I A +SA Sbjct: 453 NVSNNEVSLSKGGKGMFGFADDEIGNDMSEWNARVHPEDISRLLSRISDFFHSKADRFSA 512 Query: 322 T--IRQRDGAPAGILQ----IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQL 375 +R +D + IL S+ + I D+S E++ + + I + Sbjct: 513 EYRVRCKDDSWKWILTRGMVAHRSTDGRVTRMIGTHTDLS--------ERKLAEETIRRQ 564 Query: 376 IQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALL 431 +D +T LPNR + L+ + A + LI +DH ++V D++G+ D L+ Sbjct: 565 ANYDSLTQLPNRRLFRDRLEQTIRLAKRDQSSFALMLIDLDHFKEVNDTMGHDAGDFLLV 624 Query: 432 EVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFP 490 + R + ++ + R+ G +FV++ + ND NI +IA + ++ P ++ ++ Sbjct: 625 DAAQRIQHCVRESDTVARMGGDEFVVILPDVNDPDNIERIAQNIITKLAAPFVLGEEKAF 684 Query: 491 LTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAAL 548 ++ SIGI+ + + LL A AM + G N +F+P + E ++R+ L L Sbjct: 685 ISASIGITLYPSDADSMETLLKNADQAMYVAKHLGRNRMSYFTPVLQENAQKRMRLVNDL 744 Query: 549 KEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIG 608 ++A+S+NQL++ YQP + TG+++ EAL RW P G V PS FIPLAEE G I IG Sbjct: 745 RDALSSNQLRVFYQPIVELATGDIHKAEALIRWLHPTRGMVSPSEFIPLAEETGMIIEIG 804 Query: 609 RWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQ-L-PNQVSDAMHAWGIDGHQLTV 666 WV+ +A Q+ ++ + +SVN S + F ++ L + + G+ L V Sbjct: 805 DWVLRQAMHQVKRLQASHHKGFQISVNKSPVQFHNDNPLKAAEWLGELEQNGLLASSLVV 864 Query: 667 EITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDR 726 EITE ++++ D + R+ RD G+ +++DDFGTG+S L+ L + +KID++FV+ Sbjct: 865 EITEGVLLDDDGNVKDRLLASRDAGIQVAIDDFGTGYSSLAYLKKFDIDYLKIDQTFVNN 924 Query: 727 CLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEE 786 + +AL EAI + L L V+AEGVET++Q ++L++ C QG+ FS+ +PAEE Sbjct: 925 LGNQSDDMALCEAIIVMAHKLGLKVIAEGVETEQQRDLLKQAGCDYAQGFLFSKAIPAEE 984 Query: 787 IPGWMSS 793 + + Sbjct: 985 LEDLLRQ 991 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 36/320 (11%), Positives = 90/320 (28%), Gaps = 16/320 (5%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 DA ++ L+ +G L+ ++ F N G + +P Sbjct: 302 DALRESESRLHAILDHAPVGIWLVGKDGRYQFVNKRFCDATGIPESAFLATTH---LPDL 358 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA--EGKVYYLALV 122 + + + ++ E L DG +++ + + + Sbjct: 359 MGEQIAAACLASDQACLSQDEPYVSVETLPLVDGKLHQLEVTKAQLRDSNGEVIGAIGIS 418 Query: 123 RDASVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 D + +E R + A++ V + + V ++ MFG+ E G Sbjct: 419 VDVTGRNQAEEALRESEARWSFALEGGGDCVWDWNVSNNEVSLSKGGKGMFGFADDE-IG 477 Query: 179 MQPDTL---LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASI-SPVYDV 234 ++ + K R E+ + + WI Sbjct: 478 NDMSEWNARVHPEDISRLLSRISDFFHSKADRFSAEYRVRCKDDSWKWILTRGMVAHRST 537 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNIL--AAMCSSPPFHEMGEIICRNIESVLNESHVS 292 + ++ T +D++E + + ++ P + + + I + Sbjct: 538 DGRVTRMIGTHTDLSERKLAEETIRRQANYDSLTQLPNRRLFRDRLEQTIRLAKRDQSSF 597 Query: 293 LFALRNGMPIHWASSSHGAE 312 L + + + G + Sbjct: 598 ALMLIDLDHFKEVNDTMGHD 617 Score = 71.6 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 53/158 (33%), Gaps = 6/158 (3%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + +A ++ + ALE N ++ + + + ++G+ +E IGN++ Sbjct: 426 QAEEALRESEARWSFALEGGGDCVWDWNVSNNEVSLSKGGKGMFGFADDE-IGNDMSEWN 484 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFA---LSKVSAEGKVYY 118 R + + ++ + S E ++ KD S W + + Sbjct: 485 ARVHPEDISRLLSRISDFFHSKADRFSAEYRVRCKDDSWKWILTRGMVAHRSTDGRVTRM 544 Query: 119 LALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDP 154 + D S +E R+ + L + D Sbjct: 545 IGTHTDLSERKLAEETIRRQANYDSLTQLPNRRLFRDR 582 >UniRef50_Q1ASD1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASD1_RUBXD Length = 1101 Score = 777 bits (2008), Expect = 0.0, Method: Composition-based stats. Identities = 189/829 (22%), Positives = 336/829 (40%), Gaps = 60/829 (7%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 ++ ++++ + + A L E +G + ++PR Sbjct: 281 ERRLRESESELRAVFAAMTDAVLVLDREGRYLRVSSADPSLLYAPAEGRVGKTVHEVLPR 340 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVR 123 + + IR EGG+ + E +L G W +S + + + R Sbjct: 341 EQARLFMDAIRRALEGGR----TIGVEYELPT-GGRSRWFSARVSPMPGG---RVVWVAR 392 Query: 124 DASVEMAQKEQTRQLII----AVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 D + + + R+ D +++ I++ NRA+TE+ GY E G Sbjct: 393 DITERREAERRLRESEERFRVLADAALEGLVI-SERGRILEVNRAYTEILGYEPEEVVGA 451 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 + ++R ++ + E + + G ++ ++ ++ Sbjct: 452 PV-----LGRVVPEHREIARRRIAAGYDRPYEVEAVRKDGRRVHLEIRGRQATYRGRRVR 506 Query: 240 NLVMTFSDITEERQIRQLEGNILAAMCS------SPPFHEMGEIICRNI------ESVLN 287 + D+TE ++ + + + + + N+ E + Sbjct: 507 --ITAMRDVTERKRAERELREAQEQYRRLVEQLPAVVYIDRLDETSSNVYSSPQTEKIFG 564 Query: 288 ESHVSLFALRNGMPIHWASS-------SHGAEIQNAQSWSATIRQ--RDGAPAGI---LQ 335 S + P + +H + R RDG + Sbjct: 565 YSPQEWASDPEMFPRVLHPADRESVLAAHARANARGEPLELEYRLIARDGRVVWVRDSSI 624 Query: 336 IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLD 395 + + + DI+ EQ+ + L DP+TGLPNR + L+ Sbjct: 625 VLRDAEGNPRWRQGLMVDIT--------EQKNLEARLVHLAFHDPLTGLPNRALFMDRLE 676 Query: 396 DLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIE 451 + +A V I +D+ + V DSLG+ D+ L V R +P + R+ Sbjct: 677 HALARAGRSGDVLAVLFIDLDNFKFVNDSLGHEAGDRLLALVARRLSGATRPGDTVARLG 736 Query: 452 GTQFVLVSL-ENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGKN--RDYL 508 G +F ++ D ++A + V+ +P + + ++ S+GIS + + L Sbjct: 737 GDEFTVLLEGIADGGEAARVAGRVAEVLREPFRVAGRELFVSASVGISVSTAGSGSVEEL 796 Query: 509 LSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAE 568 + A AM ++ G + ++ F M+ +RL L L+ A+ ++L+L YQP + Sbjct: 797 MRGADLAMYEAKREGKDRYRVFDFGMSRTAHDRLRLENDLRRAVGRDELRLYYQPVVRLG 856 Query: 569 TGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIH 628 G + EAL RW P G + P RF+PLAEE G I IGR V+ AC + A WR Q Sbjct: 857 DGRVVAFEALLRWEHPRRGILLPDRFVPLAEETGMIVGIGRRVLELACSRAAGWRRQE-P 915 Query: 629 IPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILR 688 A+SVN+SA +V + G++ L +E+TES M+ E + +Q LR Sbjct: 916 SLAVSVNISARQLVRPDFVEEVGRILQRTGLEPEGLVLEVTESAAMDEPGEAARALQRLR 975 Query: 689 DMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLN 748 + GV L++DDFGTG+S LS L LPV +KID+SFV+ + L+ + ++ + L Sbjct: 976 ERGVRLALDDFGTGYSSLSYLRRLPVCFLKIDRSFVEGLGGDSGSGVLVGGVIALSRELG 1035 Query: 749 LTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPL 797 VAEG+ET Q E L ++ C + QGY+F+ P+P + S L Sbjct: 1036 FEPVAEGIETPGQLERLLELGCELGQGYYFASPMPEGAAGELVRSGARL 1084 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 57/381 (14%), Positives = 114/381 (29%), Gaps = 43/381 (11%) Query: 10 ADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAH 69 ++ + + + ++ + + G EEV+G + +I D P Sbjct: 170 SEARLRAVVAGSPVTMFALDPSGVFTLAEGRGLERMGLLPEEVVGRSAFEVIGGD--PRL 227 Query: 70 PEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV-YYLALVRDASVE 128 +R G E+ L LS + EG+V + + D + Sbjct: 228 AADLRRALAGECLASVAEFGEVVL----------ELHLSPLLREGRVEGVIGVATDVTGR 277 Query: 129 MAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL 184 +A + + R +L + V+VLD E ++ + A + G + Sbjct: 278 VAAERRLRESESELRAVFAAMTDAVLVLDREGRYLRVSSADPSLLYAPAEGRVGKTVHEV 337 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 L E +++ L E+ L T G W A +SP+ +V Sbjct: 338 L-PREQARLFMDAIRRALEGGRTIGVEYELPT-GGRSRWFSARVSPMPGG-----RVVWV 390 Query: 245 FSDITEERQIRQLEGNI-------LAAMCSSPPFHEMGEI--ICRNIESVLNESHVSLFA 295 DITE R+ + A E G I + R +L + Sbjct: 391 ARDITERREAERRLRESEERFRVLADAALEGLVISERGRILEVNRAYTEILGYEPEEVVG 450 Query: 296 LRNGMPIHWASSSHGAEIQNAQS---WSATIRQRDGAPAGILQIKTSSGAETSAFIERVA 352 + A + ++DG ++ + + R Sbjct: 451 APVLGRVVPEHREIARRRIAAGYDRPYEVEAVRKDGR-----RVHLEIRGRQATYRGRRV 505 Query: 353 DISQHMAALALEQEKSRQHIE 373 I+ E++++ + + Sbjct: 506 RITA--MRDVTERKRAERELR 524 Score = 83.9 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 44/362 (12%), Positives = 108/362 (29%), Gaps = 22/362 (6%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVL--INENDEVMFFNPAAEKLWGYKREEVIGNNIDM 59 + A + +EQ + ++E ++ +P EK++GY +E + Sbjct: 518 RAERELREAQEQYRRLVEQLPAVVYIDRLDETSSNVYSSPQTEKIFGYSPQEWA--SDPE 575 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFA--LSKVSAEGKVY 117 + PR L PA E + AR E + E +L +DG +W R + + + + + Sbjct: 576 MFPRVLHPADRESVLAAHARANARGEPLELEYRLIARDGRVVWVRDSSIVLRDAEGNPRW 635 Query: 118 YLALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 L+ D + + + + L + L + +D H + ++ + Sbjct: 636 RQGLMVDITEQKNLEARLVHLAFHDPLTGLPNRALFMDRLEHALARAGRSGDVLAVLFID 695 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL 235 + E + + L R D + G++ + Sbjct: 696 LDNFKFVNDSLGHEAGDRLLALVARRLSGATRPGD--TVARLGGDEFTVLLEGIA---DG 750 Query: 236 AHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFA 295 + +++ S+ + ++E ++ + ++++ Sbjct: 751 GEAARVAGRVAEV----LREPFRVAGRELFVSASVGISVSTAGSGSVEELMRGADLAMYE 806 Query: 296 LRNGMPIHWASSSHGAEIQNAQSWSAT--IRQ---RDGAPAGILQIKTSSGAETSAFIER 350 + + G +R+ RD + AF Sbjct: 807 AKREGKDRYRVFDFGMSRTAHDRLRLENDLRRAVGRDELRLYYQPVVRLGDGRVVAFEAL 866 Query: 351 VA 352 + Sbjct: 867 LR 868 >UniRef50_Q3A017 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A017_PELCD Length = 847 Score = 777 bits (2007), Expect = 0.0, Method: Composition-based stats. Identities = 196/815 (24%), Positives = 360/815 (44%), Gaps = 53/815 (6%) Query: 12 GIFFPALEQNMMGAVLIN-ENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHP 70 + +E ++ G V+++ + V+ N A ++ GY EE+ L D Sbjct: 51 ALHLAFMESSIDGIVIMDGASGGVVEANAAFAEMLGYSMEEL-----RRLHVWDWDAQWS 105 Query: 71 EYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMA 130 + E + +KDG + + +K+ K++ +V+D S + Sbjct: 106 KDELRLIIANTG-FSNQRFETRHRRKDGQILDVEISATKIQWLDKLFVFCVVKDISQQKL 164 Query: 131 QKEQTRQ----LIIAVDHLDRPVIVLDPER-HIVQCNRAFTEMFGYCISEASGMQPDTLL 185 Q+++ +Q + ++ + V+D E ++ N AF EM GY E GM P Sbjct: 165 QQQRLQQELTLWQLLMERSKGGIAVIDGETLKVLDVNPAFAEMLGYEPGEMLGMHPWEWD 224 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 + E ++ + G ++ + P+ + +++ Sbjct: 225 ACRSRAQIESRAFSSQVSYEEYF-FETIMKRKDGTLRNVEVNSLPMM--VGDRKHVFCLC 281 Query: 246 SDITEE----RQIRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNESHVSLFA 295 DITE + + E + + ++P + I +E +L + +L Sbjct: 282 RDITERCEANKALLAREQDFRSLAENAPDAIVRYDRQLRRLYINPVLERLLGQDKATLLG 341 Query: 296 LRNGMPIHWASSSHGAEI--------QNAQSWSATIRQRDGAPAGI---LQIKTSSGAET 344 +++ + Q + DG + + + A Sbjct: 342 KPFENHAPVDMTAYQDALEKTFQTGLQQVTEVQYPL--PDGTLGWFHARFEPEFAEDATV 399 Query: 345 SAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS- 403 + + V DI+ E + R+ + L D +TGLPNR + +A S Sbjct: 400 KSVMGIVRDIT--------ELVEQRELAQHLAFTDMLTGLPNRALFEKRFKEAAAEAKST 451 Query: 404 ---PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVS- 459 + ++ +DH +DV DSLG+ D+ L +V R + + R+ G +F ++ Sbjct: 452 DCPFALLMLDLDHFKDVNDSLGHNCGDELLRQVTARLSHCVNECDTIARMGGDEFAILLA 511 Query: 460 LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMD 517 Q+AD + + +++P I+ + ++ SIGI++ N D L + A AM Sbjct: 512 ESRGSDEAGQVADLILSTLAQPFFIESQELFISGSIGIAFFPHDSANLDELFTYADTAMY 571 Query: 518 YIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEA 577 + G N +Q + + V +L LGA+L+ A N++L+L YQP++ + G + G+EA Sbjct: 572 SAKHKGRNNFQCYDQELTRHVSAKLSLGASLRYACVNHELQLYYQPKVQLKDGRVVGVEA 631 Query: 578 LARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLS 637 L RW P+ G + P RFI +AEE G I IG WV+ AC+ ++ ++VNLS Sbjct: 632 LLRWWHPVLGMLTPDRFISIAEETGLIVEIGEWVLKTACQAAVDFNRNATAPFKVAVNLS 691 Query: 638 ALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVD 697 F N L + + G G L EITES+M+E + ++ K ++ LR +G+ +++D Sbjct: 692 CRQFLQNDLAATIEAILKTTGCRGEWLECEITESLMIEDNPQVAKTLEALRSLGITIAID 751 Query: 698 DFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVE 757 DFGTG+S L+ L P+ +KID+SF++ T+ + L++ ++G +L + +VAEGVE Sbjct: 752 DFGTGYSALNYLSRFPIDVLKIDRSFINHIDTDPCKVGLVKVFIALGTNLEMQIVAEGVE 811 Query: 758 TKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 T + L+K+ C + QGY F +P P + + +S Sbjct: 812 TVSESASLQKLGCGLAQGYLFGKPQPFKALMATLS 846 Score = 81.6 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 44/135 (32%), Gaps = 7/135 (5%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 A A + F E V + ++ NP E+L G + ++G + Sbjct: 293 ALLAREQDFRSLAENAPDAIVRYDRQLRRLYINPVLERLLGQDKATLLGKPF-----ENH 347 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVY--YLALVR 123 P + E E+Q DG+ W AE + +VR Sbjct: 348 APVDMTAYQDALEKTFQTGLQQVTEVQYPLPDGTLGWFHARFEPEFAEDATVKSVMGIVR 407 Query: 124 DASVEMAQKEQTRQL 138 D + + Q+E + L Sbjct: 408 DITELVEQRELAQHL 422 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 776 bits (2006), Expect = 0.0, Method: Composition-based stats. Identities = 167/629 (26%), Positives = 285/629 (45%), Gaps = 36/629 (5%) Query: 197 RLQQLLWKTARDQDEFLLLTRTGE---KIWIKASISPVYDVLAHLQNLVMTFSDITEERQ 253 +L + L++ T+ GE + +++ +++ + L T DI+ RQ Sbjct: 12 QLAEALFRHPGGAYPLTFETQDGEGESERYLEVTVNQL--NYQGDAYLCATARDISGRRQ 69 Query: 254 IRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNESHVSLFA-----LRNGMPI 302 + SS + + + R + + L + Sbjct: 70 TERQLRLAAQVFESSNEAILISDPDNRILTVNRAFGHITGYGEAEVRGSKASMLFSDRHE 129 Query: 303 HWASSSHGAEIQNAQSWSATI--RQRDGAPAGIL---QIKTSSGAETSAFIERVADISQH 357 +Q WS I R++ G + E S F+ DIS Sbjct: 130 PAFFQQMWQTLQQRGQWSGEIWNRRKSGEHFPCWVNISVLQDGQGEISHFVALFTDIS-- 187 Query: 358 MAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV----SPVVYLIGVDH 413 E+++ ++ + ++D +T LPNR +++ L + +A V + +DH Sbjct: 188 ------ERKEQEARVQHMAEYDALTDLPNRVLVNDRLHQAIRQAELQHNQLAVLFVDLDH 241 Query: 414 IQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL-ENDVSNITQIAD 472 +++ D+LG+ D+ L EV R ++ + R G +FVL+ N QIA+ Sbjct: 242 FKNINDTLGHCAGDELLKEVARRLAGAVRGLDTVGRTGGDEFVLILPSINQPGEAAQIAE 301 Query: 473 ELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFF 530 + + +P I + + SIGIS D G + LL A AM + + +G N ++F+ Sbjct: 302 RILRTIQQPFQIGEHSLVVGCSIGISLMPDDGSDIQTLLMNADLAMYHAKAHGRNTFRFY 361 Query: 531 SPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVP 590 + MN V ERL++ L+ A+ QL LVYQPQ L G EAL RW DP G + Sbjct: 362 TREMNTQVAERLLMENRLRRAMEQEQLYLVYQPQYDMAGQRLLGCEALLRWRDPDEGLIM 421 Query: 591 PSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQV 650 P RFIP+AE+ G I +GRWV+ +ACRQ + W + ++VN+SA + + V Sbjct: 422 PGRFIPVAEDTGLIVPLGRWVLDQACRQASLWLRAGLEPMRVAVNVSAHQLMRHDFIDDV 481 Query: 651 SDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLV 710 +A+ + GH L +E+TES +M +++ +++ MGV L++DDFGTG+S L+ L Sbjct: 482 REALQRHALPGHCLELEVTESTLMADADLASRQLAVIKAMGVRLAIDDFGTGYSSLAYLK 541 Query: 711 SLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHC 770 +KID+SF+ ++ A++ AI + +L + +AEGVE + Q L+ + C Sbjct: 542 RFAPDLVKIDRSFISDLPGDEENAAIVSAIVHLAGALGMETLAEGVENENQQRFLQTLGC 601 Query: 771 RVIQGYFFSRPLPAEEIPGWMSSVLPLKI 799 +QGY PL E + + + Sbjct: 602 EAMQGYLLGSPLAEEMMTRRLEQQQRRPM 630 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 85/214 (39%), Gaps = 6/214 (2%) Query: 76 NREGGKARVEGMSRELQLEKKDG---SKIWTRFALSKVSAEGKVYYLALVRDASVEMAQK 132 R G + L E +DG S+ + +++++ +G Y A RD S + Sbjct: 12 QLAEALFRHPGGAYPLTFETQDGEGESERYLEVTVNQLNYQGDAYLCATARDISGRRQTE 71 Query: 133 EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPA 192 Q R + + +++ DP+ I+ NRAF + GY +E G + L Sbjct: 72 RQLRLAAQVFESSNEAILISDPDNRILTVNRAFGHITGYGEAEVRGSKASMLF-SDRHEP 130 Query: 193 DNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER 252 ++ Q L + + E ++GE +IS + D + + V F+DI+E + Sbjct: 131 AFFQQMWQTLQQRGQWSGEIWNRRKSGEHFPCWVNISVLQDGQGEISHFVALFTDISERK 190 Query: 253 QIRQLEGNILA--AMCSSPPFHEMGEIICRNIES 284 + ++ A+ P + + + + I Sbjct: 191 EQEARVQHMAEYDALTDLPNRVLVNDRLHQAIRQ 224 Score = 109 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 58/161 (36%), Gaps = 11/161 (6%) Query: 7 DNAADGIFF---PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 + E + ++ + ++ ++ N A + GY EV G+ ML Sbjct: 67 RRQTERQLRLAAQVFESSNEAILISDPDNRILTVNRAFGHITGYGEAEVRGSKASMLFSD 126 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYLAL 121 PA + + + + S E+ +K G W ++ + +++AL Sbjct: 127 RHEPAFFQQMWQTLQ----QRGQWSGEIWNRRKSGEHFPCWVNISVLQDGQGEISHFVAL 182 Query: 122 VRDASVEMAQKEQTRQL--IIAVDHLDRPVIVLDPERHIVQ 160 D S Q+ + + + A+ L V+V D ++ Sbjct: 183 FTDISERKEQEARVQHMAEYDALTDLPNRVLVNDRLHQAIR 223 >UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Comamonadaceae RepID=A1W8G6_ACISJ Length = 756 Score = 776 bits (2006), Expect = 0.0, Method: Composition-based stats. Identities = 187/723 (25%), Positives = 308/723 (42%), Gaps = 59/723 (8%) Query: 130 AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY-CISEASGMQPDTLLNIP 188 A + R+ +D ++ + R +V+CN+ E+FG +A G + L Sbjct: 35 AMQRVLREQQTLLDSAGVGIVFI-RNRALVRCNQRCAEIFGLPSPEDAIGRSSEALHPSR 93 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 + L + + E L G+ W + + + + + DI Sbjct: 94 GAFRELGRAAYPTLARGQAYRTERQLKRCDGQLFWAHLTGRLI-NPRDSREGSIWIIDDI 152 Query: 249 TEERQIRQLEGNILA----AMCSSPPFHEMGEII-----CRNIESVLNESHVSLFALRNG 299 E+++ + L S+ + R+ E +L L + Sbjct: 153 DEQKRAQAQLQAALWEKQVLFDSAMVGIVFLQERRMTRCNRHFEQILGYGPGELAGSSSR 212 Query: 300 MPIHWASSSHGAE------IQNAQSWSAT--IRQRDGAPAG--ILQIKTSSGAETSAFIE 349 H A + Q++ +R RDG + I Sbjct: 213 RWYLSDEDWHEAGVRCYAPLVQGQAFEGQMVLRTRDGRAIECEVRSKAVDPSNVAQGSIW 272 Query: 350 RVADISQHMA-------------------------------ALALEQEKSRQHIEQLIQF 378 V D+S+ + ++++ ++ I + + Sbjct: 273 IVMDVSERLRIQRQLAGMHGELEQQVRDRTRELQETVGNLHREIQDRQRDQERIYWMAHY 332 Query: 379 DPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVV 434 D +T LPNR L D + +A V + +D+ + V DSLG+ D L+E+ Sbjct: 333 DALTELPNRVLLAERGQDAIRQAQESGAPLAVMFLDLDNFKHVNDSLGHRIGDALLVEIA 392 Query: 435 NRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLS 494 R R ++ + R+ G +FVL+ + ++A +++ +P+ I L LS Sbjct: 393 QRLRTTVRQRDTVARLGGDEFVLLLPGANAQGAARVAAKMQEAALQPVHIQHHELSLALS 452 Query: 495 IGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAI 552 +GI+ G + + L+ +A AM + +G N ++FF+P M L L AL+ A+ Sbjct: 453 MGIALFPEHGSDFETLIQSADTAMYRAKADGRNSFRFFTPTMQAQSARALQLTNALRRAL 512 Query: 553 SNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVI 612 NQL L YQPQ+ TG + G+EAL RWH P G V P+ FIP+AE+ G+I IG WV+ Sbjct: 513 ERNQLSLHYQPQVSIATGRVCGVEALLRWHHPELGAVSPAEFIPVAEDTGQILPIGEWVL 572 Query: 613 AEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESM 672 A QL W SQ + ++VNLSA+ FR QL V + +G+ H L +E+TE++ Sbjct: 573 RTALAQLRTWHSQGLPALTMAVNLSAVQFRQPQLLELVDRLLAEYGVQPHLLELELTENV 632 Query: 673 MMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKR 732 + + L GV LS+DDFGTG+S LS L + +KID+SFV + Sbjct: 633 AVADPHAAIATMDQLHAKGVRLSMDDFGTGYSSLSHLKRFQIYRLKIDQSFVRDLDHDGN 692 Query: 733 ILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 A++ AI + Q+L + AEGVET Q LR+ C QG++FSRPL A + ++ Sbjct: 693 DRAIVSAIIRMAQALGMRTTAEGVETAHQLTFLREQGCDEAQGFYFSRPLGAPHLQQYLL 752 Query: 793 SVL 795 Sbjct: 753 QRP 755 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 96/273 (35%), Gaps = 16/273 (5%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGY-KREEVIGNNIDMLI 61 + L+ +G V I N ++ N +++G E+ IG + + L Sbjct: 36 MQRVLREQQ----TLLDSAGVGIVFI-RNRALVRCNQRCAEIFGLPSPEDAIGRSSEALH 90 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKVYYLA 120 P + AR + E QL++ DG W + + + + Sbjct: 91 PSRGA---FRELGRAAYPTLARGQAYRTERQLKRCDGQLFWAHLTGRLINPRDSREGSIW 147 Query: 121 LVRDASVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 ++ D + + Q + + + D ++ L ER + +CNR F ++ GY E Sbjct: 148 IIDDIDEQKRAQAQLQAALWEKQVLFDSAMVGIVFL-QERRMTRCNRHFEQILGYGPGEL 206 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 +G E + +R L + + + +L TR G I + V D Sbjct: 207 AGSSSRRWYLSDEDWHEAGVRCYAPLVQGQAFEGQMVLRTRDGRAIECEVRSKAV-DPSN 265 Query: 237 HLQNLVMTFSDITEERQIRQLEGNILAAMCSSP 269 Q + D++E +I++ + + Sbjct: 266 VAQGSIWIVMDVSERLRIQRQLAGMHGELEQQV 298 >UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FU0_DECAR Length = 1006 Score = 776 bits (2006), Expect = 0.0, Method: Composition-based stats. Identities = 186/697 (26%), Positives = 309/697 (44%), Gaps = 34/697 (4%) Query: 122 VRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQP 181 R+ V + +L A + V C+ +F + E +G Q Sbjct: 316 RREQLVSQQLLLKEERLTAAQRIAQLGSWEIHLPSMHVTCSDELYRIFEFTKRE-TGYQY 374 Query: 182 DTLLN--IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 L PE + L + + + LL G ++ S Y Sbjct: 375 QDFLAKIHPEDRSVVDKTLHESIASRQPASLKHRLLMPDGRVKYVLESCETEYGRDGTPL 434 Query: 240 NLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESHVSL 293 ++ T ++T ++++ + +A+ S + ++ + + + Sbjct: 435 RVIGTSQEVTAQQEMLAQMQLLASAVQYSGEAILITDVKNKILTVNPAFTRLTGYTSEEA 494 Query: 294 FA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG---ILQIKTSSGAE 343 L G + I W I R++DG + + Sbjct: 495 VGRDPSFLSAGRTMPEEYERMWNGIAERGFWQGEIWDRRKDGGIYPKWMSISVIRGEDGM 554 Query: 344 TSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS 403 + D+S + + + + D +TGL NR +L LD + A Sbjct: 555 IRYHVAHFTDVSSE--------RAAEERLHHMAHHDVLTGLLNRLSLKGRLDQALAAARR 606 Query: 404 ----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVS 459 V + +D + + D+LG+ D+ L+EV NR R+ ++ + R+ G +FV++ Sbjct: 607 DGSRVAVLFVDLDRFKVINDTLGHHVGDELLIEVANRLRDGVRDSDVVARVGGDEFVIML 666 Query: 460 LE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAM 516 S + +A++L V + I T SIGI+ G++ D L+ A AM Sbjct: 667 SGVEHTSAVAMVAEKLVFSVGQSYQIGGYDLYSTPSIGIAIYPTDGEDGDILMKNADAAM 726 Query: 517 DYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIE 576 + + G N +QFF MNE ERL AL+ A++N + L YQP I + + +E Sbjct: 727 YHAKMAGRNNFQFFDAKMNEAALERLNTEHALRRALANQEFCLYYQPVIDLASNRVASLE 786 Query: 577 ALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNL 636 AL RW+ P G + P +FI +AEE G I+ +G WV+ ACRQLA++ + I + VN+ Sbjct: 787 ALIRWNHPEKGLLLPGKFIGIAEETGLIQPLGEWVLWAACRQLADFAAAGISGIKMGVNI 846 Query: 637 SALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSV 696 SA+ R+ LP + A+ ID L EITES+ ME TE + + +L MGV +++ Sbjct: 847 SAIQMRNGNLPLLARGVIEAYDIDPRNLIFEITESVAMEQPTETVRILDLLNAMGVSVAI 906 Query: 697 DDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGV 756 DDFGTG+S LS L P+ +K+D+SFV++ E + +A + SL L VVAEGV Sbjct: 907 DDFGTGYSSLSYLRMFPINHLKLDRSFVEQIGEEIDGCVICDATIGLAHSLELKVVAEGV 966 Query: 757 ETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 ET+ Q + LR C ++QG+ FSRP+PA+E+ ++ Sbjct: 967 ETQAQLDYLRSRGCDMVQGFLFSRPVPADEVLAFIRQ 1003 Score = 138 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 39/271 (14%), Positives = 91/271 (33%), Gaps = 19/271 (7%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLW-------GYKREEVIGN 55 ++ + A +G+ I+ + + +++ GY+ ++ + Sbjct: 321 VSQQLLLKEERLTAAQRIAQLGSWEIHLPSMHVTCSDELYRIFEFTKRETGYQYQDFLAK 380 Query: 56 NIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFA--LSKVSAE 113 I + R + + + + +L DG + + Sbjct: 381 -----IHPEDRSVVDKTLHESIASRQPASLKH----RLLMPDGRVKYVLESCETEYGRDG 431 Query: 114 GKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCI 173 + + ++ + + Q + L AV + +++ D + I+ N AFT + GY Sbjct: 432 TPLRVIGTSQEVTAQQEMLAQMQLLASAVQYSGEAILITDVKNKILTVNPAFTRLTGYTS 491 Query: 174 SEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYD 233 EA G P L+ + R+ + + Q E + G SIS + Sbjct: 492 EEAVGRDPS-FLSAGRTMPEEYERMWNGIAERGFWQGEIWDRRKDGGIYPKWMSISVIRG 550 Query: 234 VLAHLQNLVMTFSDITEERQIRQLEGNILAA 264 ++ V F+D++ ER + ++ Sbjct: 551 EDGMIRYHVAHFTDVSSERAAEERLHHMAHH 581 >UniRef50_C0N514 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N514_9GAMM Length = 1084 Score = 774 bits (2001), Expect = 0.0, Method: Composition-based stats. Identities = 169/701 (24%), Positives = 306/701 (43%), Gaps = 41/701 (5%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 + A + + + + + ++ ++ + ++ LD I Q N A +F + G Sbjct: 397 ITELAQAKESLENREQHILAILNGVPEAILTLDVNGKIEQTNPAAERIFHATENALVGEN 456 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 E ++Q EF G + + S+S + + Sbjct: 457 ISRFFAHSETVTSFNDIIEQAAEGK-----EFDGQRYDGSDVSMVLSLSQIRAAKGEV-- 509 Query: 241 LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRN---------IESVLNESHV 291 V +DI+ ++ + + +G R+ E + + Sbjct: 510 WVCVITDISTRKRTELQLQQTTTELNAILDNAMVGIAFLRDRQFVRVNEKFEELFGYTRD 569 Query: 292 SLFAL--------RNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAG--ILQIKTSSG 341 + + + H + + ++DG I +G Sbjct: 570 DIEGQSVQCLYLNEDAYLQFGEEAYHQLTSGDNYEAQLEMVRKDGQVFWCGISGKAIDAG 629 Query: 342 AETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV--- 398 + + I DI+ Q ++ +H+ +L D +TGLPNR + ++ + Sbjct: 630 SPKAGTIWLFEDITI--------QRQNEEHLTRLASIDGLTGLPNRAVFTDRVEHAIHKS 681 Query: 399 -DKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVL 457 + V+ + +DH + + DSLG+ D L EV R + ++ + R+ G +F L Sbjct: 682 MRNSGRLAVFFLDLDHFKHINDSLGHKAGDILLTEVAGRIKACVREGDTVARLGGDEFTL 741 Query: 458 VSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHN 514 + + + ++A+++ +++P I++ ++ SIGIS G++ D L+ A Sbjct: 742 LLEDVRSAEYVGKVAEKVIKSMTQPYQIENTEVNISPSIGISLYPADGRDVDMLVRNADA 801 Query: 515 AMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYG 574 AM + +K G N +QF+S MN +RL + AL+ + L L YQPQ+ +TG+L G Sbjct: 802 AMYHAKKVGRNNFQFYSAEMNAEAAKRLAMETALRRVVEQQDLHLHYQPQVNLQTGKLVG 861 Query: 575 IEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSV 634 E L RW G+V P+ F+P+ E+ G I +G W++ +AC EW + ++V Sbjct: 862 AEVLLRWQSEQWGNVSPAEFVPMLEDTGMITQVGEWILRQACATYLEWSERLPDNFMMAV 921 Query: 635 NLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGL 694 NLS F+ L + + G+ L +EITESM+M+ + L M + L Sbjct: 922 NLSGRQFKGGSLAAFIRRLLDETGMPAAHLELEITESMLMDDTELATITLAELSAMNISL 981 Query: 695 SVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAE 754 ++DDFGTG+S LS L P+ +KID SFV ++K A+++AI ++ SL L VVAE Sbjct: 982 AIDDFGTGYSSLSYLKQFPLNVLKIDSSFVRDVTSDKDDAAIVDAIMAMSNSLGLKVVAE 1041 Query: 755 GVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 GVET EQ + L + CR+ QG+ FS+ + ++ + Sbjct: 1042 GVETAEQRQYLLRHDCRLAQGFLFSKAVDKDKFSTLIDQAT 1082 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 54/322 (16%), Positives = 111/322 (34%), Gaps = 21/322 (6%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + ++ + L + ++ N ++ NPAAE+++ ++G NI Sbjct: 402 QAKESLENREQHILAILNGVPEAILTLDVNGKIEQTNPAAERIFHATENALVGENISRFF 461 Query: 62 -PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA 120 + + + I EG E ++ DGS + +LS++ A ++ Sbjct: 462 AHSETVTSFNDIIEQAAEGK---------EFDGQRYDGSDVSMVLSLSQIRAAKGEVWVC 512 Query: 121 LVRDASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEA 176 ++ D S + Q +Q L +D+ + L +R V+ N F E+FGY + Sbjct: 513 VITDISTRKRTELQLQQTTTELNAILDNAMVGIAFL-RDRQFVRVNEKFEELFGYTRDDI 571 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 G L + L + + ++ + G+ W S + D + Sbjct: 572 EGQSVQCLYLNEDAYLQFGEEAYHQLTSGDNYEAQLEMVRKDGQVFWCGISGKAI-DAGS 630 Query: 237 HLQNLVMTFSDITEERQIRQLEGNILAA-----MCSSPPFHEMGEIICRNIESVLNESHV 291 + F DIT +RQ + + + + + F + E V Sbjct: 631 PKAGTIWLFEDITIQRQNEEHLTRLASIDGLTGLPNRAVFTDRVEHAIHKSMRNSGRLAV 690 Query: 292 SLFALRNGMPIHWASSSHGAEI 313 L + I+ + +I Sbjct: 691 FFLDLDHFKHINDSLGHKAGDI 712 >UniRef50_B7KJT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KJT7_CYAP7 Length = 812 Score = 774 bits (2000), Expect = 0.0, Method: Composition-based stats. Identities = 167/698 (23%), Positives = 309/698 (44%), Gaps = 40/698 (5%) Query: 131 QKEQTRQLIIAVDHLDR-PVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE 189 +E + + V+ ++ + +LD + I+ N + GY +E G + Sbjct: 123 LRESEERYRLLVEGIEDYGIFMLDGQGRIISWNLGAERIQGYQSTEIIGRHYSIFFTTTD 182 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 A ++ Q K R + E + G W +SPV+ L+ DI+ Sbjct: 183 TSAKVPEKILQTALKQGRFKGEGWRRRKDGSLFWASIVLSPVFAQNRQLKGFAKITRDIS 242 Query: 250 EERQIR------------QLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFA-- 295 E +Q +A+ + + + + S L Sbjct: 243 ERKQAEVQKNKLLKDLTDLKLALDQSAIVAVTNSQGIITAVNDQFCQISGYSKEELIGKT 302 Query: 296 ---LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQIKT---SSGAETSAF 347 + +G A I + W I R + G + + + + Sbjct: 303 HRIINSGYHSKKFFQQLWATISQGKIWRGEICNRSKTGQFYWVATTIVPFLNQNNQPFQY 362 Query: 348 IERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS---- 403 DI+Q ++ + + + + D +TGLPNR L L+ + +A Sbjct: 363 FAIRFDITQ--------RKLAEKRLRHEVLHDSLTGLPNRTLLIQRLEQVRHRAKRKANY 414 Query: 404 -PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN 462 + I +D +++ D+LG+ D+ L+ + +R +E ++ + R+ G +F+++ E Sbjct: 415 CFALLFIDLDRFKNINDNLGHPIGDRVLITIASRLQECVRSLDTVARLGGDEFIILLDEL 474 Query: 463 DVSNIT-QIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGK-NRDYLLSTAHNAMDYIR 520 + +I + + ++ P++I+ + LT SIGI+++ + LL A AM ++ Sbjct: 475 EEEKEIFKIIERIEKQLTTPMVIEGQTLSLTASIGIAFNDTNLSNSDLLRNADLAMYRVK 534 Query: 521 KNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALAR 580 G G+ + M + L LK AI + L YQP + +T + G EAL R Sbjct: 535 NEGKAGYAIYQSEMYAQAQALWELENHLKLAIERQEFLLYYQPILSLKTLTVIGFEALIR 594 Query: 581 WHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN--IHIPALSVNLSA 638 W P G + P FIP+AEE I IG WV+ ++C+QL+ WR + + ++VNLS Sbjct: 595 WQHPQRGLISPVHFIPVAEETDLIVAIGEWVLQQSCQQLSAWREKYPQANHLTINVNLSN 654 Query: 639 LHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDD 698 + ++ + + G+ QL +EITE+++M + + L+ + +S+DD Sbjct: 655 RQLEKDNFVYKLDNVLQQTGLPATQLKLEITETLLMTNLAAAIATLSQLKQRNINISIDD 714 Query: 699 FGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVET 758 FGTG+S L+ L LPV+ +KID+SFV + + L +++ I S+G+ L + V+AEG+ET Sbjct: 715 FGTGYSSLNYLCRLPVSSLKIDRSFVANVHEDSKNLQIIQTILSLGEQLMIEVIAEGIET 774 Query: 759 KEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLP 796 ++ E L+++ C+ QGY FS+P+ E + + L Sbjct: 775 QKHLEQLQELGCQYGQGYLFSKPVNCEAAEQLICAGLC 812 Score = 185 bits (472), Expect = 5e-45, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 97/270 (35%), Gaps = 15/270 (5%) Query: 2 KLTDADNAADGIFFPALEQNMM-GAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 ++ ++ ++ + +E G +++ ++ +N AE++ GY+ E+IG + + Sbjct: 118 QIVESLRESEERYRLLVEGIEDYGIFMLDGQGRIISWNLGAERIQGYQSTEIIGRHYSIF 177 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YY 118 + + E +KDGS W LS V A+ + + Sbjct: 178 FTTTDTS---AKVPEKILQTALKQGRFKGEGWRRRKDGSLFWASIVLSPVFAQNRQLKGF 234 Query: 119 LALVRDASVEMAQKEQ-------TRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY 171 + RD S + Q L +A+D V V + + I N F ++ GY Sbjct: 235 AKITRDISERKQAEVQKNKLLKDLTDLKLALDQSAI-VAVTNSQGIITAVNDQFCQISGY 293 Query: 172 CISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV 231 E G ++N +L + + + E ++TG+ W+ +I P Sbjct: 294 SKEELIGKT-HRIINSGYHSKKFFQQLWATISQGKIWRGEICNRSKTGQFYWVATTIVPF 352 Query: 232 YDVLAHLQNLVMTFSDITEERQIRQLEGNI 261 + DIT+ + + + Sbjct: 353 LNQNNQPFQYFAIRFDITQRKLAEKRLRHE 382 Score = 88.1 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 51/148 (34%), Gaps = 9/148 (6%) Query: 17 ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHN 76 AL+Q+ + + N + N ++ GY +EE+IG ++ H + Sbjct: 264 ALDQSAI-VAVTNSQGIITAVNDQFCQISGYSKEELIGKTHRIINSG----YHSKKFFQQ 318 Query: 77 REGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLALVRDASVEMAQKEQ 134 ++ + E+ K G W + + Y A+ D + +++ Sbjct: 319 LWATISQGKIWRGEICNRSKTGQFYWVATTIVPFLNQNNQPFQYFAIRFDITQRKLAEKR 378 Query: 135 TRQ--LIIAVDHLDRPVIVLDPERHIVQ 160 R L ++ L +++ + Sbjct: 379 LRHEVLHDSLTGLPNRTLLIQRLEQVRH 406 >UniRef50_C6DZH0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Geobacter RepID=C6DZH0_GEOSM Length = 853 Score = 774 bits (2000), Expect = 0.0, Method: Composition-based stats. Identities = 184/833 (22%), Positives = 344/833 (41%), Gaps = 67/833 (8%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 T+ ++ E + +G ++ + N L G R E++G + + Sbjct: 28 TEELVRELQVYTDLYEFSPVGLFTLDAAGNIRSVNNTGAGLLGKPRPELVGVPFE----Q 83 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVR 123 + + + EL L ++ R + + + Y V Sbjct: 84 AVAEPSKGDFSVLLNDARTSQSKSACELTLVSASSRQLPVR--IDALCCKEGTEYRLSVL 141 Query: 124 DASVEMA----QKEQTRQLIIAVDHLDRPVIVLDPE-RHIVQCNRAFTEMFGYCISEASG 178 D + + + + +++++ + I + N +M G E G Sbjct: 142 DITKRKQSELALQRSEARYRRLFETAKDGIMIVEADSGAIAEVNPFLVDMLGCRRDELLG 201 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 L + + + K D+ L T G I ++ + + + Sbjct: 202 KTVWEL-HFFAHVVPGAADFKAMQQKEFFHGDDLQLATVRGRDIPVEVVSNCYQSEQSSV 260 Query: 239 QNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIE-------------SV 285 DI+ + Q + + R E + Sbjct: 261 VQFN--IRDISIRKNAEQALLSSEEQCRTIVSNINEYVYSVRFEEGDITSVYHSPKCFDI 318 Query: 286 LNESHVSLFALRNGMPIHWASSSHGAEIQ-------------NAQSWSATIRQRDGAPAG 332 + + P+ W + H + + + I +DG+ Sbjct: 319 TGYTPEEYY----RDPLLWFTMIHEEDRNLVVEFLNGIFAGLDHEPIRHRIIHKDGSVRW 374 Query: 333 IL---QIKTSSGAE---TSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPN 386 I+ ++ + + + D++ + +++ ++I L DP+T LPN Sbjct: 375 IVNNCAVQRQRRGDRLSITRLDGFILDVT--------DIKRAEENIFFLAHHDPLTKLPN 426 Query: 387 RNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLK 442 R+ L+ ++ ++ A + + +D + + DS+G+ D+ L V R + + Sbjct: 427 RSTLYERMEQVICAAQKSSRNVALLFLDIDGFKQINDSMGHDVGDRLLQSVAKRLSDCTR 486 Query: 443 PDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD-- 500 + R+ G +FV++ + + T +A+++ N + +T SIGIS Sbjct: 487 SCDVVSRLGGDEFVVMLWDCGEAETTVVAEKVINAG---FPVLGSNVTVTPSIGISIFPD 543 Query: 501 LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLV 560 G++ LL A AM + +K+GGN +QFF+ +NE+ ER +L A L+ A+ + L Sbjct: 544 DGRDYLTLLKHADIAMYHAKKSGGNNFQFFTHKLNEIAHERFMLEAELRRALDREEFVLY 603 Query: 561 YQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLA 620 YQP++ TG+ G+EAL RW P HG + P FI +AEE G + I +W+I CRQ+ Sbjct: 604 YQPKVDLSTGKFSGMEALIRWQHPAHGLMLPESFIGIAEESGLLTQISKWIIPTVCRQIQ 663 Query: 621 EWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEI 680 +W+ Q I+ + +VNLSA F+ + +++ GI L +E+TE+ +M + Sbjct: 664 QWQQQGINSVSAAVNLSASFFQHPDFEETIEESLLQTGIAPECLELELTEATIMSDPQRV 723 Query: 681 FKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAI 740 + ++ +G+ LS+DDFGTG+S LS L LPV ++KID+SF+ + A++ A+ Sbjct: 724 LGSMAAMKALGLQLSIDDFGTGYSSLSYLKKLPVDKLKIDQSFIHNIARDADNAAVVRAV 783 Query: 741 TSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 SIG+S+ L V+AEGVE Q L+ QGY+FSRPLP ++ + Sbjct: 784 ISIGRSMQLRVIAEGVENASQLAWLQAEGSEEAQGYYFSRPLPVAKMTSLLKQ 836 >UniRef50_Q2W5V0 Predicted signal transduction protein containing a membrane domain n=3 Tax=Magnetospirillum RepID=Q2W5V0_MAGSA Length = 820 Score = 774 bits (2000), Expect = 0.0, Method: Composition-based stats. Identities = 195/824 (23%), Positives = 342/824 (41%), Gaps = 55/824 (6%) Query: 3 LTDADNAADG----IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNID 58 L A+ A + + L ++ ++ +P A ++GY EE++G Sbjct: 16 LHAAEAAGERIPAGLHAALLRDLPDVLYSVDAAGRFIWVSPNAATVFGYSAEELVGMEAA 75 Query: 59 MLIP-RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK-- 115 L + R IR A + E+++ +KDG IW + Sbjct: 76 ALYAKPEDRVGTVRRIR------DAGGRAVRSEVEMRRKDGISIWAAIYACALMDGEGRI 129 Query: 116 VYYLALVRDASV----EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY 171 +RD + + + D + + + I+ N+AF +F Y Sbjct: 130 TGINGAIRDITEIWQTRKTLGDSEDRFRRLSDVATEAICI-HFQGKIIDMNKAFETLFAY 188 Query: 172 CISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV 231 E M +++ + + ++ + E + + G ++ Sbjct: 189 SRDELLTMWAWDVIDPRDIS-----LAKSMVAQQYEAPYEVRGIRKDGSVFPMEIHSK-- 241 Query: 232 YDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPP------FHEMGEIICRNIESV 285 + + V + D+T+ ++ + A+ SP M + + S+ Sbjct: 242 HSRMGGDSVRVTSIRDLTQSKKAEASVRLLSQAVEQSPVAVAVVGGDGMVQYVNSAHASL 301 Query: 286 LNESHVSLFALRNGMPIHWASSSH----GAEIQNAQSWSATIR--QRDGAPAGIL---QI 336 S ++ + + + ++ ++DG Sbjct: 302 TGHSSSAVVGKPLSALYPGKAGAMLGDFWRTLLGQGELQGELQVNRQDGTWQWQQVHGSK 361 Query: 337 KTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDD 396 + G E + ++ ++ D++ ++ + ++ FD +T LPNR + + L Sbjct: 362 VATPGEEGTHYLLQIEDVTL--------RKDQERRLQHQALFDGLTDLPNRVHALDRLAR 413 Query: 397 LVDKAV----SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEG 452 +D A + + +D + + DSLG+ + D+ L+ R R+ + R G Sbjct: 414 EIDMARDHGRKVGLLFVDLDGFKAINDSLGHEYGDELLVLAAERLRQAAGDGGVVARFGG 473 Query: 453 TQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLL 509 +F+++ + D + ++A + + S+P I + T SIG++ G+ + LL Sbjct: 474 DEFLVIMGDMEDGAAAGEVAAAIVDRFSQPFTISRRDLISTASIGLALYPEDGRTQQTLL 533 Query: 510 STAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAET 569 A AM + G N + FF+ MNE + RL + L+ A+ +Q LVYQP + T Sbjct: 534 RNADIAMYQAKLAGRNRFCFFTSRMNEEAEARLRMEGELRRAVGTDQFHLVYQPLVAVAT 593 Query: 570 GELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHI 629 G G+EAL RW +P G+VPP RFIP AE G I IGR V+ ACR W Sbjct: 594 GRAVGVEALLRWSNPELGNVPPDRFIPQAETCGVIVAIGRMVLETACRDARRWVEDGHAD 653 Query: 630 PALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRD 689 L +N+S F+ V A+ G+ L +EITE +++ ++ ++ L D Sbjct: 654 LRLCINVSPRQFQDAGFLGDVRAALAGSGLSPANLELEITEGLLLTERGDVDTLLRTLTD 713 Query: 690 MGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNL 749 MGV LS+DDFGTG+S LS L P +KID+SF+ L + L+E I ++ L L Sbjct: 714 MGVKLSIDDFGTGYSSLSYLERFPFDTLKIDRSFMIGMLERQERKVLVETIVAMASGLGL 773 Query: 750 TVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 V+AEGVET EQ L I+C + QGY FSRP+PA +I + Sbjct: 774 EVIAEGVETAEQMAHLAAINCDIAQGYLFSRPVPAGDISPLLDR 817 Score = 81.2 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 53/340 (15%), Positives = 117/340 (34%), Gaps = 30/340 (8%) Query: 2 KLTDADNA--ADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDM 59 LT + A + + A+EQ+ + ++ + V + N A L G+ V+G + Sbjct: 257 DLTQSKKAEASVRLLSQAVEQSPVAVAVVGGDGMVQYVNSAHASLTGHSSSAVVGKPLSA 316 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEG--KVY 117 L P ++ R G+ + ELQ+ ++DG+ W + SKV+ G + Sbjct: 317 LYPGKAGAMLGDFWRTLLGQGE-----LQGELQVNRQDGTWQWQQVHGSKVATPGEEGTH 371 Query: 118 YLALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 YL + D ++ Q+ + + + + L V LD + R G + Sbjct: 372 YLLQIEDVTLRKDQERRLQHQALFDGLTDLPNRVHALDRLAREIDMARDHGRKVGLLFVD 431 Query: 176 ASGMQP--DTLLNI--PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV 231 G + D+L + E RL+Q G++ + + Sbjct: 432 LDGFKAINDSLGHEYGDELLVLAAERLRQAAGDGGVVA------RFGGDEFLV------I 479 Query: 232 YDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHV 291 + + I + + + + ++ + R +++L + + Sbjct: 480 MGDMEDGAAAGEVAAAIVDR-FSQPFTISRRDLISTASIGLALYPEDGRTQQTLLRNADI 538 Query: 292 SLFA--LRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGA 329 +++ L + +S E + +R+ G Sbjct: 539 AMYQAKLAGRNRFCFFTSRMNEEAEARLRMEGELRRAVGT 578 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 774 bits (1999), Expect = 0.0, Method: Composition-based stats. Identities = 190/699 (27%), Positives = 323/699 (46%), Gaps = 40/699 (5%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 L+R + + + +L +I L E ++ + + + E Sbjct: 103 LLRASRAFADLSLSESKTRALLSNLPDIIIRLHREGAVLDMQVGS---YVFDMGEWLHSA 159 Query: 181 PDTLLNIP-EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 D ++P + A R+ L EF +A I P Q Sbjct: 160 EDGSYHLPSDIAALIGTRIDAALRGKGMQMLEFQWSRDPMCVRHWEARIVPR-----DRQ 214 Query: 240 NLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESHVSL 293 +++ +IT+ RQ +S + + + R E+++ + Sbjct: 215 EVLLVVREITQRRQQENQLRLWAKVFEASNEAILITDANFRIISVNRAYETIMGYREQDV 274 Query: 294 FALRNGM-----PIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGIL---QIKTSSGAE 343 + + + + ++ W + +++ G T+S E Sbjct: 275 LGVDTLEVGAKLQTYSFYRNLVSLLKERGHWQGELINQRKSGEEFPSWFSVTQVTNSRGE 334 Query: 344 TSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS 403 +I DI+ E + SR IE L D +TGLPNR L++ L+ + + Sbjct: 335 PEHYIAIFNDIT--------EHKNSRAQIEFLAHHDALTGLPNRILLNDRLEMAITQVRR 386 Query: 404 ----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVS 459 + I +D ++V DSLG+ DQ L E R ++ + R+ G +FV++ Sbjct: 387 QGEKLGILFIDLDRFKNVNDSLGHGVGDQILQEAAKRLTANVRTGDTVSRLGGDEFVVLF 446 Query: 460 LENDVS-NITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAM 516 N+ + +LR + P +D +T SIGI+ D G++ + L+ A AM Sbjct: 447 PRVRTEGNLADLTIKLREQLQLPYTVDGISLHITPSIGIAVYPDDGEDPNTLIKNADAAM 506 Query: 517 DYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIE 576 ++ G N +QF++P +N +RL L + L+ AI +L YQPQI +G+L+G+E Sbjct: 507 YLAKEKGRNNYQFYTPTLNAKTLDRLKLESDLRSAIDAGDFELHYQPQIIGSSGQLWGLE 566 Query: 577 ALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNL 636 AL RW G + P+ FIPLAEE G I +G WV+ +A +QLAEWR Q + +SVN+ Sbjct: 567 ALIRWRHRERGLISPAEFIPLAEETGLIVGLGDWVLVQAVKQLAEWRRQGHNHLVVSVNI 626 Query: 637 SALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSV 696 SAL FR ++V + + + +E+TE+M+M+ + ++ LR++G +++ Sbjct: 627 SALQFRQGDFLDRVKHILQEAQLVPDAIELELTETMLMQDVQSAIQTLKGLRELGFRIAI 686 Query: 697 DDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGV 756 DDFGTGFS L+ L LP+ +KID+SFV L E LA++E+I ++ Q+L +AEGV Sbjct: 687 DDFGTGFSSLNYLRHLPINVLKIDQSFVREMLQEPESLAIVESIIALAQALGKETIAEGV 746 Query: 757 ETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 ET+ +F++L+ CR++QGYFF+RP+P W Sbjct: 747 ETRAEFDVLQARGCRLMQGYFFARPMPPVIFDQWYQQQT 785 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 35/258 (13%), Positives = 87/258 (33%), Gaps = 21/258 (8%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVM------FFNPAAEKLWGYKREEVIGNNIDML 60 + ++ L + ++ V+ + E L + E+ + + Sbjct: 113 LSLSESKTRALLSNLPDIIIRLHREGAVLDMQVGSYVFDMGEWL--HSAEDGSYHLPSDI 170 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA 120 + + + + + W +++ + L Sbjct: 171 AALIGTRIDAALRGKGMQMLE--FQWSRDPMCVRH------WE----ARIVPRDRQEVLL 218 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 +VR+ + Q+ Q R + + +++ D I+ NRA+ + GY + G+ Sbjct: 219 VVREITQRRQQENQLRLWAKVFEASNEAILITDANFRIISVNRAYETIMGYREQDVLGVD 278 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 + + + R + LL + Q E + ++GE+ S++ V + ++ Sbjct: 279 TLEVGAKLQTYSFYRNLV-SLLKERGHWQGELINQRKSGEEFPSWFSVTQVTNSRGEPEH 337 Query: 241 LVMTFSDITEERQIRQLE 258 + F+DITE + R Sbjct: 338 YIAIFNDITEHKNSRAQI 355 >UniRef50_Q21UE9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Comamonadaceae RepID=Q21UE9_RHOFD Length = 1114 Score = 774 bits (1999), Expect = 0.0, Method: Composition-based stats. Identities = 195/833 (23%), Positives = 345/833 (41%), Gaps = 63/833 (7%) Query: 1 MKLTDADNAADGIFFPALEQ-NMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDM 59 +K T+ F ++E +G + + ++ +L G V+ ++ Sbjct: 293 LKSTNERLNQQIHLFESMENLAAVGYWTSGADPATLRWSKGMYRLAGLAPGSVMHRSVG- 351 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL 119 R + + V+G E Q E DG W R + S EG + Sbjct: 352 ------RSRIRAEDQEKFAQARRAVDGAIVEYQWEHPDGRMHWHRSRMQHGSGEGGEAIV 405 Query: 120 -ALVRDASVEMAQKEQTRQLIIAVDHLDRPV--------IVLDPERHIVQCNRAFTEMF- 169 +V+D + E A + + + ++ V + D + E+F Sbjct: 406 FGVVQDVTHERAAALALQDRLGFIQNITSRVPGMVFQLRLKTDGRFQFGYVSDLVREIFR 465 Query: 170 GYCISEASGMQPDTL-LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASI 228 G + L L+ P+ ++ ++ + + E+ L GE W+ Sbjct: 466 GVSPEQIMQDAAGILKLHHPDDVSEFIASIKASARELKPWRHEYRLRFEDGEVRWLLGQA 525 Query: 229 SPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVL-- 286 +P + + +DIT +Q + A + + Sbjct: 526 TPEREADGTVLW-NGLITDITARKQSEERLRESEARFRALTELSSDWYWEQDAQFRFVRL 584 Query: 287 -------------NESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSA-TIRQRD--GAP 330 N V+ + ++H A +Q +++ + D G Sbjct: 585 DGSSQTSMRLPEDNYLGVTRWETDAQGVSQAQWAAHRAVLQAHETFHDFEMLCTDAVGCL 644 Query: 331 AGIL---QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNR 387 + + + DIS E++++ + IE+L +D +T LPNR Sbjct: 645 TWVAISGTPIFDVQGQFKGYRGIGRDIS--------ERKRAEEKIERLAFYDVLTDLPNR 696 Query: 388 NNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKP 443 L + L + + + I +D+ +D+ D+ G+ D L +V R ++ Sbjct: 697 RLLMDRLQQALVSSAREHGAGALLFIDLDNFKDLNDTQGHDVGDALLQQVAKRLLASVRE 756 Query: 444 DQYLCRIEGTQFVLVSLENDVSNI------TQIADELRNVVSKPIMIDDKPFPLTLSIGI 497 + R+ G +FV++ + + Q+ ++ +++P + T SIG+ Sbjct: 757 TDTVARLGGDEFVVMLQGLERTQADAITQVEQVGRKIMAQLNQPYRLGSAEHHSTPSIGV 816 Query: 498 SYDL--GKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNN 555 + + D LL A AM + G N +FF P M +V +R L L+ ++ + Sbjct: 817 TLFDNQQQTLDDLLKQADLAMYEAKSAGRNTLRFFDPTMQALVTQRTALELELRHGLARD 876 Query: 556 QLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEA 615 +L L YQP + + + G+EAL RW P G V P FIP+AE+ G I +G+WV+ A Sbjct: 877 ELVLFYQPVVD-QDARVVGVEALVRWQHPQRGLVAPLAFIPMAEQTGLILPLGQWVLRVA 935 Query: 616 CRQLAEWRSQNIHI-PALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMM 674 C QL W +Q ++VN+SA FR + QV + G + +L +E+TES+++ Sbjct: 936 CLQLVSWSAQAATERLTMAVNVSARQFRQPEFVQQVLTMLRQTGANPKRLKMELTESLLL 995 Query: 675 EHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRIL 734 + ++ LRD+GV S+DDFGTG+S LS L LP+ ++KID+SFV LT+ Sbjct: 996 TDTQDAIAKMSELRDVGVRFSLDDFGTGYSSLSYLKLLPLQQLKIDQSFVRDVLTDPNDA 1055 Query: 735 ALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 A+ + ++GQSL L VVAEGVET Q + L + C QGY F +P+P ++ Sbjct: 1056 AIARTVLALGQSLGLGVVAEGVETVGQRDFLLQHGCTRFQGYLFGKPVPIAQL 1108 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 56/428 (13%), Positives = 126/428 (29%), Gaps = 64/428 (14%) Query: 4 TDADN-AADGIFFPALEQNMMGA-VLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 T A + Q+ + + + + N L G +EV+G L Sbjct: 157 TQALRMRSQQQLAAVFSQSPVAISLSRERDGAYVDVNEQWTLLTGLSLQEVLGRTSVELG 216 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLAL 121 AH + + EG + R + +L ++DG ++ + +++ Y+L+ Sbjct: 217 LWPDGTAHDDALAQAGEGARLR----NLDLPFVRQDGRQLVLQINAARIEIGHTAYFLSY 272 Query: 122 VRDASVEMAQK--------------EQTRQLIIAVDH----LDRPVIVLDPERHIVQCNR 163 ++D + E A + E+ Q I + + ++ ++ Sbjct: 273 LKDVTPERAMQAELLASEQLLKSTNERLNQQIHLFESMENLAAVGYWTSGADPATLRWSK 332 Query: 164 AFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIW 223 + G A+++ + Q E+ G W Sbjct: 333 GMYRLAGLAPGSVMHRSVGR----SRIRAEDQEKFAQARRAVDGAIVEYQWEHPDGRMHW 388 Query: 224 IKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCS------SPPFHEMGEI 277 ++ + + D+T ER + L + + F + Sbjct: 389 HRSRMQHGSGEGGEAI-VFGVVQDVTHERAAALALQDRLGFIQNITSRVPGMVFQLRLKT 447 Query: 278 ICRNIESVLNESHVSLFA----------------LRNGMPIHWASSSHGAEIQNAQSWSA 321 R +++ +F L + + +S A + + W Sbjct: 448 DGRFQFGYVSDLVREIFRGVSPEQIMQDAAGILKLHHPDDVSEFIASIKASARELKPWRH 507 Query: 322 TIRQR--DGAPAGIL--QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQ-LI 376 R R DG +L T + + DI+ +++S + + + Sbjct: 508 EYRLRFEDGEVRWLLGQATPEREADGTVLWNGLITDITA--------RKQSEERLRESEA 559 Query: 377 QFDPMTGL 384 +F +T L Sbjct: 560 RFRALTEL 567 Score = 73.5 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 110/358 (30%), Gaps = 21/358 (5%) Query: 2 KLTDADNAADGIFFPALEQNMMGA----VLINENDEVMFF--NPAAEKLWGYKREEVIGN 55 +L A A + + E D ++ + AE+L G +G Sbjct: 29 RLQTALFDAQRRLQAVADVAGGLIGKLEFELREGDSLLLVGFDVQAEQLLGKACAPFLGQ 88 Query: 56 NIDMLIPRDLRPAHPEYIRH-NREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEG 114 + ML+P P + GG + E L K + + A ++ Sbjct: 89 PLLMLLPGLSATELPAALLEVALHGGVIEPRSLLGEGLLSGKSFTFFAFQLAPAR----A 144 Query: 115 KVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPV-IVLDPERHIVQCNRAFTEMFGYCI 173 V + + + +QL + + + + V N +T + G + Sbjct: 145 VVKFWDSAGALETQALRMRSQQQLAAVFSQSPVAISLSRERDGAYVDVNEQWTLLTGLSL 204 Query: 174 SEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYD 233 E G L P+ A + L Q + + + G ++ ++ + + + Sbjct: 205 QEVLGRTSVELGLWPDGTAHDDA-LAQAGEGARLRNLDLPFVRQDGRQLVLQINAARI-- 261 Query: 234 VLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESV--LNE--S 289 + H + D+T ER ++ + S+ + ++E++ + S Sbjct: 262 EIGHTAYFLSYLKDVTPERAMQAELLASEQLLKSTNERLNQQIHLFESMENLAAVGYWTS 321 Query: 290 HVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAF 347 LR ++ + + + + IR D Q + + + Sbjct: 322 GADPATLRWSKGMYRLAGLAPGSVMHRSVGRSRIRAEDQEKFA--QARRAVDGAIVEY 377 >UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 Tax=Colwellia psychrerythraea 34H RepID=Q47X88_COLP3 Length = 1086 Score = 774 bits (1999), Expect = 0.0, Method: Composition-based stats. Identities = 170/689 (24%), Positives = 297/689 (43%), Gaps = 37/689 (5%) Query: 132 KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL--LNIPE 189 +E + +L +D+ + + N+ F + G + L L E Sbjct: 393 EEISSRLRAIIDNSPIGIWFTGIDGRYHFVNKTFCNLAGIKEEDMLNTPSSNLAELLGDE 452 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 + L + + + + ++ + + + + L+ DIT Sbjct: 453 IAHHCLDSDKAALAQDSPHVSFETIPRSNAKPYILEITKVKLKNAQGEVVGLIGISKDIT 512 Query: 250 EERQIRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNESHVSLFA-----LRN 298 +RQ + +S + + I + + S L + Sbjct: 513 NKRQQEEDLKLADIVYQNSSEAMMITDSKNEIIAINPALSEITGYSSSELIGKNPNVFSS 572 Query: 299 GMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGIL---QIKTSSGAETSAFIERVAD 353 G EI+ +W I +++G I +D Sbjct: 573 GKQNPEFYQLMWEEIKLTGTWQGEIWNTKKNGKEYPEWLSISTIYDDYGNVFRRIALFSD 632 Query: 354 ISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLI 409 I+ E++K I + ++D +T LPNR + L+ + + + I Sbjct: 633 IT--------EKKKKDALILRQAKYDSLTNLPNRIMFIDRLEQEIKVSHRKNQKFALIFI 684 Query: 410 GVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNIT 468 +D+ + + D+ G+ + D L+E R ++ + R+ G +F ++ + D+ N+ Sbjct: 685 DLDNFKKINDTRGHVYGDALLIEAGKRITHCIREVDTVARLGGDEFTILLSDIADIHNVE 744 Query: 469 QIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNG 526 I ++ +S+P I ++ S+G++ + LL A AM + G N Sbjct: 745 SICQKVLQTLSEPFFISKMYTYISASLGVTIYPNDASSTLELLKNADQAMYLAKNLGRNR 804 Query: 527 WQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLH 586 + +F+ +M E + L L L++AIS NQL++ YQP + +TG + EAL RW P+ Sbjct: 805 FCYFTASMQEEALDHLELINDLRKAISLNQLEVFYQPIVELQTGVIRKAEALLRWKHPVR 864 Query: 587 GHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQL 646 G V P+ FIPLAEE G I IG WV + + + + Q +SVN S + FR + Sbjct: 865 GMVSPAEFIPLAEESGLIIEIGDWVFKQTVQHINTCKDQLGLDIQISVNKSPVQFRES-- 922 Query: 647 PNQVS--DAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFS 704 +Q+ + + G + +EITE ++M ++T +R+ R G+GLS+DDFGTG+S Sbjct: 923 IDQLDWLAYLAENQLPGENIVIEITEGLLMNNNTSTMERLSKFRSAGIGLSMDDFGTGYS 982 Query: 705 GLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEM 764 LS L + +KID+SF + L EAI ++ Q L L V+AEG+ETKEQ E+ Sbjct: 983 SLSYLKKFALDYLKIDQSFTRNIAPGSEDMILSEAIITMAQKLGLKVIAEGIETKEQMEL 1042 Query: 765 LRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 L C QGY+FSRP+PAE+ ++S Sbjct: 1043 LIGAGCDYGQGYYFSRPIPAEDFLQLLAS 1071 Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 101/271 (37%), Gaps = 9/271 (3%) Query: 13 IFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEY 72 ++ + +G + F N L G K E+++ L Sbjct: 398 RLRAIIDNSPIGIWFTGIDGRYHFVNKTFCNLAGIKEEDMLNTPSSNLAELLGDEIAHHC 457 Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRDASVEMA 130 + ++ +S E + + + K+ V + + +D + + Sbjct: 458 LDSDKAALAQDSPHVSFE-TIPRSNAKPYILEITKVKLKNAQGEVVGLIGISKDITNKRQ 516 Query: 131 QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEF 190 Q+E + I + +++ D + I+ N A +E+ GY SE G P + + + Sbjct: 517 QEEDLKLADIVYQNSSEAMMITDSKNEIIAINPALSEITGYSSSELIGKNP-NVFSSGKQ 575 Query: 191 PADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITE 250 + + + + T Q E + G++ SIS +YD ++ + FSDITE Sbjct: 576 NPEFYQLMWEEIKLTGTWQGEIWNTKKNGKEYPEWLSISTIYDDYGNVFRRIALFSDITE 635 Query: 251 ERQ-----IRQLEGNILAAMCSSPPFHEMGE 276 +++ +RQ + + L + + F + E Sbjct: 636 KKKKDALILRQAKYDSLTNLPNRIMFIDRLE 666 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 773 bits (1998), Expect = 0.0, Method: Composition-based stats. Identities = 196/699 (28%), Positives = 312/699 (44%), Gaps = 44/699 (6%) Query: 130 AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE 189 + Q R +VDH ++ +D + N + G+ E G + P Sbjct: 331 HSERQLRLTQYSVDHGVDLILWVDLNSRVRYANLRAQKQLGWHPHELYGRPLSRI--APS 388 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 + LQQ + + E R G+ + ++ + S + L + D++ Sbjct: 389 LGGAAWMSLQQRIARGDNVTLETSFSCRNGQTLAVEVTASVLTHTEGD-GLLCLIARDVS 447 Query: 250 EERQIRQLEGNILAAMCSSP----------PFHEMGEIICRNIESVLNESHVSLFALRNG 299 E +Q N A + + I I L+ + Sbjct: 448 ELKQAAAALANSDARLRLALQASGTGLYELELATGAITITGAIRQRLDIRVPEQQPIPAA 507 Query: 300 MPIHWASSSHGAEIQNA-QSWSATIRQRD------------GAPAGILQ----IKTSSGA 342 + + W A I+ A + W D G + I + Sbjct: 508 LWLAWVHPDDQARIRQAFEHWQQEPHAPDRLETSFRVCPPGGRMRWVHARGQYIAAAEDT 567 Query: 343 ETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV 402 + + V D++ +Q+++ + IE+ FD +TGL NR+ L+ L + Sbjct: 568 AAARLVGTVNDVT--------DQKENEEQIERYAHFDALTGLANRHALYRRLGQAITSVH 619 Query: 403 SP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV 458 V + +D + + D+LG+A D L EV R + PD L R+ G +F+LV Sbjct: 620 QHQHPLAVLFVDLDKFKTINDTLGHAVGDVVLREVAGRLSDFAGPDDILARLGGDEFLLV 679 Query: 459 SLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAM 516 D +++A + +S P+ +D + P T +IG+S G+ D L+ A AM Sbjct: 680 LPGADERAASEVAACILTAMSVPVRVDGRELPTTPTIGVSLYPRDGEEADDLIRNADIAM 739 Query: 517 DYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIE 576 + G N +Q ++P MN ERL L L+ A ++ L YQPQI G + G E Sbjct: 740 YQAKARGRNTFQLYTPDMNAAAAERLQLQGELRNAHLRGEIMLHYQPQIDVTDGHVVGCE 799 Query: 577 ALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNL 636 AL RW P G V P RFIPLAEE G I +G W I EACRQ W+ + ++VNL Sbjct: 800 ALMRWKHPTLGMVSPGRFIPLAEESGLIITLGNWAIREACRQAMVWQRAGLPPLTVAVNL 859 Query: 637 SALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSV 696 S F+ + V+DA+ + L +E+TES++M ++ + L+ +GV LS+ Sbjct: 860 SGCQFQQSNFTAVVADALADTSLPPQYLELELTESIVMHDVEQVIATLTELKALGVQLSI 919 Query: 697 DDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGV 756 DDFGTG+S L+ L PV +KID+ FV T+ A++ AI ++G+ LNL ++AEGV Sbjct: 920 DDFGTGYSSLNYLKRFPVDLLKIDQGFVRDVETDPSDAAIVRAIIALGKILNLRLIAEGV 979 Query: 757 ETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 ET+ Q + L IQGY+FSRPLPAE++ +++ L Sbjct: 980 ETQGQLDYLHAAGVDFIQGYYFSRPLPAEDMATYLAQRL 1018 Score = 97.8 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 41/292 (14%), Positives = 94/292 (32%), Gaps = 20/292 (6%) Query: 10 ADGIFFPA---LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 ++ ++ + + ++ N V + N A+K G+ E+ G + + P Sbjct: 332 SERQLRLTQYSVDHGVDLILWVDLNSRVRYANLRAQKQLGWHPHELYGRPLSRIAPSLGG 391 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA-EGKVYYLALVRDA 125 A + + AR + ++ E ++G + S ++ EG + RD Sbjct: 392 AA-----WMSLQQRIARGDNVTLETSFSCRNGQTLAVEVTASVLTHTEGDGLLCLIARDV 446 Query: 126 SVEMA----QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY--CISEASGM 179 S +L +A+ + L+ + A + + Sbjct: 447 SELKQAAAALANSDARLRLALQASGTGLYELELATGAITITGAIRQRLDIRVPEQQPIPA 506 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWK-TARDQDE--FLLLTRTGEKIWIKASISPV-YDVL 235 P+ A R + + A D+ E F + G W+ A + Sbjct: 507 ALWLAWVHPDDQARIRQAFEHWQQEPHAPDRLETSFRVCPPGGRMRWVHARGQYIAAAED 566 Query: 236 AHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLN 287 LV T +D+T++++ + A + + R +++ + Sbjct: 567 TAAARLVGTVNDVTDQKENEEQIERY-AHFDALTGLANRHALYRRLGQAITS 617 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 773 bits (1997), Expect = 0.0, Method: Composition-based stats. Identities = 170/596 (28%), Positives = 279/596 (46%), Gaps = 32/596 (5%) Query: 218 TGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI 277 + + I+ + PV + A+ L T + ++ ++ + + + Sbjct: 461 DKKAMDIEEWVKPVLGLFANRVAL-ELQRQSTH--KEMEMAASVFKESAEAIVICDSEDK 517 Query: 278 ICRNIESVLNESHVSLFALRNGMPIHWASSS--------HGAEIQNAQSWSATI--RQRD 327 I R + + S + P S A ++ W + +++ Sbjct: 518 ILRVNPAFYKITGYSQIEVVGQSPQLLQSDRPIQSMLHNREAALKKNDIWQCEVSGYRKN 577 Query: 328 GAPAGILQIK---TSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGL 384 G Q +T I +DI+ E++ +HI L D +T L Sbjct: 578 GEHFLSWQTVIPVKDENGDTQQIIYIFSDIT--------ERKLFEEHIYNLAHHDSLTQL 629 Query: 385 PNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREK 440 PNR ++ +++A V I +DH + + D+ G+ D L +V RF+ Sbjct: 630 PNRVAFQLQMNTALERAKRSKTQMAVMFIDLDHFKMINDTSGHPVGDLLLQQVAERFKRA 689 Query: 441 LKPDQYLCRIEGTQFVLVSLENDVSNITQI-ADELRNVVSKPIMIDDKPFPLTLSIGISY 499 L+ + + R G +F ++ N T + A +L +P + ++ SIGI Sbjct: 690 LRKEDVISRFGGDEFTVLLSNTRTDNATTVVARKLLACFYEPFKLPSSEVVISASIGIGV 749 Query: 500 D--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQL 557 G + D L+ A +AM ++ G N +QF++ MN+ +ERL L L++A+ ++ Sbjct: 750 FPDNGDSVDSLMMNADSAMYRAKEKGRNCFQFYTKEMNQYAQERLELELDLRKALERDEF 809 Query: 558 KLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACR 617 L YQPQ G + G EAL RW P G + P FI +AE G I IG+WVI AC Sbjct: 810 VLHYQPQFD-PNGRIIGCEALIRWQHPDKGLLSPGEFINMAEITGLIVPIGKWVIDTACM 868 Query: 618 QLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHD 677 Q W SQ +SVNLS F + L V +A+ GI L +E+TES+MM + Sbjct: 869 QHKMWLSQGYPALNISVNLSGRQFLHHDLLETVKNAITTSGITPSCLELELTESIMMVNV 928 Query: 678 TEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALL 737 E + + + +G+ +S+DDFGTG+S +S L PV ++KID+SFV +K +A++ Sbjct: 929 EETIRTLNAISSLGIHMSIDDFGTGYSSMSCLKRFPVNKLKIDQSFVRGLPQDKEDVAIV 988 Query: 738 EAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSS 793 ++I + +LNLTV+AEGVET EQ E L+ C QGY+FSRP+ A +I ++ + Sbjct: 989 KSIIVMAHALNLTVIAEGVETLEQLEFLKSSRCEEFQGYYFSRPILAADIEQYLQA 1044 Score = 99.7 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 75/233 (32%), Gaps = 15/233 (6%) Query: 127 VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 + ++ +++ D E I++ N AF ++ GY E G P L + Sbjct: 487 QRQSTHKEMEMAASVFKESAEAIVICDSEDKILRVNPAFYKITGYSQIEVVGQSPQLLQS 546 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 + R + L K Q E + GE ++ PV D Q ++ FS Sbjct: 547 DRPIQSMLHNR-EAALKKNDIWQCEVSGYRKNGEHFLSWQTVIPVKDENGDTQQIIYIFS 605 Query: 247 DITEERQIRQLEGN--ILAAMCSSPPFHEMGEIICRNIES-----------VLNESHVSL 293 DITE + + N ++ P + +E ++ H + Sbjct: 606 DITERKLFEEHIYNLAHHDSLTQLPNRVAFQLQMNTALERAKRSKTQMAVMFIDLDHFKM 665 Query: 294 FALRNGMPIH-WASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETS 345 +G P+ + A I + G +L T + T+ Sbjct: 666 INDTSGHPVGDLLLQQVAERFKRALRKEDVISRFGGDEFTVLLSNTRTDNATT 718 Score = 88.1 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 56/157 (35%), Gaps = 14/157 (8%) Query: 15 FPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIR 74 +++ V+ + D+++ NPA K+ GY + EV+G + +L + + Sbjct: 499 ASVFKESAEAIVICDSEDKILRVNPAFYKITGYSQIEVVGQSPQLLQSDRPIQS----ML 554 Query: 75 HNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYLALVRDASVEMAQK 132 HNRE + + E+ +K+G W K + + D + + Sbjct: 555 HNREAALKKNDIWQCEVSGYRKNGEHFLSWQTVIPVKDENGDTQQIIYIFSDITERKLFE 614 Query: 133 EQTRQL--IIAVDHLDRPVIVLDPERHIVQCNRAFTE 167 E L ++ L V +Q N A Sbjct: 615 EHIYNLAHHDSLTQLPNRVAFQ------LQMNTALER 645 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 773 bits (1997), Expect = 0.0, Method: Composition-based stats. Identities = 169/582 (29%), Positives = 274/582 (47%), Gaps = 44/582 (7%) Query: 246 SDITEERQIRQLEGNILAAMC--SSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIH 303 +I E + A + +I R + + E+ S + Sbjct: 340 REIAERSRAEAELRIAAIAFDSQEGMMVTDAHGVILRVNRAFVEETGYSAEDVVGRKRTM 399 Query: 304 WASSS--------HGAEIQNAQSWSATI--RQRDGAPAGIL---QIKTSSGAETSAFIER 350 S +Q +W + R+++G + G + ++ Sbjct: 400 LTSGREDAALDDAMWETVQRCGAWQGEVWDRRKNGEVYPVWLTISAVKGQGGLVTHYVAT 459 Query: 351 VADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVV 406 DI+Q ++ + +L +DP+T LPNR L + L ++ + + Sbjct: 460 HIDITQ--------RKAVEDQLHKLAFYDPLTQLPNRRLLLDRLGHVLAGSTRSRNQGAI 511 Query: 407 YLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVS- 465 I +D+ + + D+ G+ D+ L EV R + ++ + R+ G +FV++ + Sbjct: 512 MFIDLDNFKALNDTQGHDVGDRLLAEVAQRLKSSVRQCDTVARLGGDEFVVMVQDLAADS 571 Query: 466 ----NITQIADELRNVVSKPIMI---------DDKPFPLTLSIGISYD--LGKNRDYLLS 510 + +A ++ + P + + + T SIGI+ N D LL Sbjct: 572 MVVAQVEAVAGKILAALDCPYRLVFDAELGRRNALNYHCTASIGITLFGAHSTNVDELLK 631 Query: 511 TAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETG 570 A AM + +G N +FF P M + R+ L A L+EA+ Q +L YQPQ+ E+ Sbjct: 632 QADLAMYQAKDSGRNAIRFFDPEMQAAITSRVALEADLREAVEAGQFQLYYQPQVVGESH 691 Query: 571 ELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN-IHI 629 L G EAL RWH G VPPS FIPLAEE G I +G+WV+ AC QLA W SQ + Sbjct: 692 RLTGAEALLRWHHSRRGMVPPSEFIPLAEETGLILPLGQWVLETACAQLATWASQPEMAQ 751 Query: 630 PALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRD 689 ++VN+SA R +QV + G + +L +E+TES+++ + +I ++ +L+ Sbjct: 752 LTVAVNVSAHQIRQTDFVDQVLAVLADAGANPQRLKLELTESLLVSNVEDIIAKMTLLKS 811 Query: 690 MGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNL 749 GVG S+DDFGTG+S LS L LP+ ++KID+SFV+ LT+ A+ + I ++ +SL L Sbjct: 812 RGVGFSLDDFGTGYSSLSYLKRLPLDQLKIDQSFVNEVLTDANDAAIAKMIVALAESLGL 871 Query: 750 TVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 V+AEGVET+EQ L + C QGY FS+PLP W+ Sbjct: 872 AVIAEGVETEEQRNFLAESGCHAYQGYLFSKPLPLAGFEQWI 913 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 69/176 (39%), Gaps = 5/176 (2%) Query: 85 EGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDH 144 G++ E+++ + + + + +A + L R+ + + + R IA D Sbjct: 305 RGLAEEMRIRELNEQ---LEQRVLERTARLESANQELNREIAERSRAEAELRIAAIAFD- 360 Query: 145 LDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWK 204 ++V D I++ NRAF E GY + G + T+L A + + + + Sbjct: 361 SQEGMMVTDAHGVILRVNRAFVEETGYSAEDVVGRK-RTMLTSGREDAALDDAMWETVQR 419 Query: 205 TARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGN 260 Q E + GE + +IS V + + V T DIT+ + + Sbjct: 420 CGAWQGEVWDRRKNGEVYPVWLTISAVKGQGGLVTHYVATHIDITQRKAVEDQLHK 475 Score = 110 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 63/163 (38%), Gaps = 9/163 (5%) Query: 2 KLTDADN-AADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 ++ + A+ + G ++ + + ++ N A + GY E+V+G ML Sbjct: 341 EIAERSRAEAELRIAAIAFDSQEGMMVTDAHGVILRVNRAFVEETGYSAEDVVGRKRTML 400 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YY 118 A + + + R E+ +K+G +S V +G + +Y Sbjct: 401 TSGREDAALDDAMWETVQ----RCGAWQGEVWDRRKNGEVYPVWLTISAVKGQGGLVTHY 456 Query: 119 LALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIV 159 +A D + A ++Q +L + L ++LD H++ Sbjct: 457 VATHIDITQRKAVEDQLHKLAFYDPLTQLPNRRLLLDRLGHVL 499 >UniRef50_Q3SIU2 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SIU2_THIDA Length = 1012 Score = 773 bits (1996), Expect = 0.0, Method: Composition-based stats. Identities = 174/693 (25%), Positives = 305/693 (44%), Gaps = 40/693 (5%) Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 +E RQ + + L V + D + CN AF G +E G ++ P Sbjct: 331 RNLEESERQKNLILHTLPDLVWLKDADGVYQMCNPAFERFTGRTEAEMRGKTDFDIV-GP 389 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 E R Q + L G + I++ + + D + ++ D+ Sbjct: 390 ELARKFRNEDAQAMLADHPLTSMHALQAVDGRDVQIESVKTTLRDRDRRVLGILGIARDV 449 Query: 249 TEERQIRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNESHVSLFALRNGMPI 302 TE ++ + + A+ + + + L + L L+ Sbjct: 450 TERQRASEQLALVNFALNHVKEAALLADENAQFHYVNDEACRSLGWTPEELLRLKVTDID 509 Query: 303 HWASSS-HGAEIQN------AQSWSATIRQRDGAPAGIL-QIKTSSGAETSAFIERVADI 354 + + + + + R G + + + V D+ Sbjct: 510 RDLTGRGQWRALWEQIKVLNSMTIEGHYKTRSGRTFPVEVSVNYFVYGGREYVLSLVRDV 569 Query: 355 SQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIG 410 + E+++ I L FD +TGLPNR L + L+ + + ++ Sbjct: 570 T--------ERKEVEAQIRSLAYFDSLTGLPNRRLLLDRLNQARLSSERTREYGALMILD 621 Query: 411 VDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL------ENDV 464 +D + + D+ G+ D+ L++V R ++ + +CR+ G +FV+V + V Sbjct: 622 LDRFKTLNDTQGHDVGDRLLIDVARRLTASVRQNDTVCRLGGDEFVVVLEGFGSDEDQAV 681 Query: 465 SNITQIADELRNVVSKPIMIDDK--PFPLTLSIGISYDLGKNR--DYLLSTAHNAMDYIR 520 + IA+++R +++P + F T S+G++ G + D LL A A+ + Sbjct: 682 TQAEAIAEKVRAALNQPYSLSGNGSRFHSTTSVGLTLFCGHDATADMLLKQADVALYQAK 741 Query: 521 KNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALAR 580 G N +FF+PAM + R+ + AAL++A+ ++ + YQPQ+ + G EAL R Sbjct: 742 DAGRNLVRFFNPAMQAAIDTRMAMEAALRQALERDEFHVYYQPQVDQRE-RVIGAEALLR 800 Query: 581 WHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQN-IHIPALSVNLSAL 639 W + + P FIPLAEE G I IG+WV+ AC QL W S ++VN+SA Sbjct: 801 WRPQGNEAISPLEFIPLAEETGLILPIGKWVLDVACAQLKAWESDPRAAHLKIAVNVSAR 860 Query: 640 HFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDF 699 F V D++ G+D +L +E+TES+++E + R++ L +GV +DDF Sbjct: 861 QFHEPDFVATVQDSLARSGVDPTRLQLELTESVVLEKIETVVSRMEELNALGVSFCLDDF 920 Query: 700 GTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETK 759 GTG+S LS L LP+ ++KID+SFV + + A+++AI ++ +SL L V+AEGVET Sbjct: 921 GTGYSSLSYLKRLPLDQVKIDQSFVRDVVDDSNDAAIVQAIMAMSRSLGLNVIAEGVETH 980 Query: 760 EQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 Q + L C QG+ F P+P E+ + Sbjct: 981 AQRDFLAGK-CLGYQGFLFCEPIPIEQWERVLK 1012 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 36/259 (13%), Positives = 80/259 (30%), Gaps = 9/259 (3%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 +T ++ L L + + NPA E+ G E+ G ++ Sbjct: 329 VTRNLEESERQKNLILHTLPDLVWLKDADGVYQMCNPAFERFTGRTEAEMRGKTDFDIVG 388 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLA 120 +L + L+ DG + + + + + L Sbjct: 389 PELARKFRNEDAQAMLADHPLTSMHA----LQAVDGRDVQIESVKTTLRDRDRRVLGILG 444 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 + RD + EQ + A++H+ ++ D N G+ E ++ Sbjct: 445 IARDVTERQRASEQLALVNFALNHVKEAALLADENAQFHYVNDEACRSLGWTPEELLRLK 504 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN 240 + + L + + E TR+G ++ S++ Y V + Sbjct: 505 VTDI-DRDLTGRGQWRALWEQIKVLNSMTIEGHYKTRSGRTFPVEVSVN--YFVYGGREY 561 Query: 241 LVMTFSDITEERQIRQLEG 259 ++ D+TE +++ Sbjct: 562 VLSLVRDVTERKEVEAQIR 580 Score = 82.3 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 61/170 (35%), Gaps = 8/170 (4%) Query: 2 KLTDADNAADGIFF--PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDM 59 +T+ A++ + AL A+L +EN + + N A + G+ EE++ + Sbjct: 448 DVTERQRASEQLALVNFALNHVKEAALLADENAQFHYVNDEACRSLGWTPEELLRLKVTD 507 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL 119 + R + M+ E + + G +++ G+ Y L Sbjct: 508 I----DRDLTGRGQWRALWEQIKVLNSMTIEGHYKTRSGRTFPVEVSVNYFVYGGREYVL 563 Query: 120 ALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIVQCNRAFTE 167 +LVRD + + Q R L + L ++LD + E Sbjct: 564 SLVRDVTERKEVEAQIRSLAYFDSLTGLPNRRLLLDRLNQARLSSERTRE 613 >UniRef50_Q2BPN3 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) withPAS/PAC sensor n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPN3_9GAMM Length = 878 Score = 772 bits (1994), Expect = 0.0, Method: Composition-based stats. Identities = 192/701 (27%), Positives = 311/701 (44%), Gaps = 38/701 (5%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERH----IVQCNRAFTEMFGYCISEA 176 ++ S + + + R L + V + + G A Sbjct: 181 VLNRFSSQENLQHKERLLENITQAMPGVVYQYHLDDELKQSFTYIGPGIETISGITAEAA 240 Query: 177 SGMQPDTLL--NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 P+ + + EF + + G+ W++ S P Sbjct: 241 I-EDFSEFWEQVHPDDRSGLWASIVHTGKHGLAWSHEFRVFHKNGQMHWVRGSALPSKLG 299 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNE 288 DIT E+ + A S+ + + I R ++ Sbjct: 300 SQEGLLWNGIILDITPEKASIEQLRLAGIAFSSTNEGIMITDKRNRIIDINRAYMNISGY 359 Query: 289 SHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG----ILQIK 337 L LR+ + S ++ + W I R ++G I + Sbjct: 360 GRDELIGKNPSILRSEHHSNEFYQSIWKSLEEERHWQGEIWNRLKNGEVVPHWVNINAVH 419 Query: 338 TSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDL 397 + + F+ +ADIS + S + + L D +T LPNR LD Sbjct: 420 DPNTDALTHFVSVIADISNI--------KASEEKLSHLAHHDALTNLPNRLLFSARLDHA 471 Query: 398 VDK--AVSPVVYL-IGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQ 454 + A +V + +D + + DSLG+ + DQ LL+V R + L L R+ G + Sbjct: 472 LTHREASEKIVMFHLDLDRFKHINDSLGHKYGDQLLLQVTERLKGVLSDKDTLARVGGDE 531 Query: 455 FVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLST 511 F ++ E VS+ IAD L + +P +D K + T SIG++ D G + D L Sbjct: 532 FAILVEELEHVSDAESIADRLVEAMEQPFTLDGKDYFTTASIGLALAPDHGDDIDTLTKH 591 Query: 512 AHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGE 571 A A++ + +G N + FF P ++E V+E + L L++A++ NQ +L YQPQ+ + Sbjct: 592 ADIALNQAKDSGRNNFAFFQPELSETVQEWIKLEPELRKALAENQFQLHYQPQVDSTGTA 651 Query: 572 LYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPA 631 + G EAL RWH P G +PP++F+P+AEEIG + IG WV+ A QL+ WRS+ + Sbjct: 652 IVGAEALIRWHHPEMGIIPPNQFLPIAEEIGLMNKIGEWVMNTALEQLSFWRSRGLIGFR 711 Query: 632 LSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMG 691 L++NL+ LP V A+ + I L +EI E+ +MEH+ E + LR++G Sbjct: 712 LAINLAGDQITKQNLPMVVMQALEHFQIPAEMLELEILETFLMEHEEEATSTFKQLRELG 771 Query: 692 VGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTV 751 V LS+DDFGTG+S LS L LP+T++KID+S V + A+ +A+ + +L+LTV Sbjct: 772 VHLSLDDFGTGYSALSYLKKLPITKVKIDQSLVRDIPEDPNDEAIAKAVILLAHTLDLTV 831 Query: 752 VAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 AEGVET+ Q E L +C +QGY FS+P+ A + Sbjct: 832 CAEGVETRAQREFLESENCDQLQGYLFSKPIEANAFTNLLK 872 Score = 150 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 90/267 (33%), Gaps = 10/267 (3%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDE----VMFFNPAAEKLWGYKREEVIGNNIDML 60 + + + + + +DE + P E + G E I + Sbjct: 189 ENLQHKERLLENITQAMPGVVYQYHLDDELKQSFTYIGPGIETISGITAEAAI-EDFSEF 247 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL- 119 + P + + S E ++ K+G W R + + L Sbjct: 248 W-EQVHPDDRSGLWASIVHTGKHGLAWSHEFRVFHKNGQMHWVRGSALPSKLGSQEGLLW 306 Query: 120 -ALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 ++ D + E A EQ R IA + +++ D I+ NRA+ + GY E G Sbjct: 307 NGIILDITPEKASIEQLRLAGIAFSSTNEGIMITDKRNRIIDINRAYMNISGYGRDELIG 366 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL-AH 237 P +L + + + L + Q E + GE + +I+ V+D Sbjct: 367 KNPS-ILRSEHHSNEFYQSIWKSLEEERHWQGEIWNRLKNGEVVPHWVNINAVHDPNTDA 425 Query: 238 LQNLVMTFSDITEERQIRQLEGNILAA 264 L + V +DI+ + + ++ Sbjct: 426 LTHFVSVIADISNIKASEEKLSHLAHH 452 Score = 92.7 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 68/175 (38%), Gaps = 11/175 (6%) Query: 1 MKLTDADNAADGIFFP--ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNID 58 + +T + + + A G ++ ++ + ++ N A + GY R+E+IG N Sbjct: 311 LDITPEKASIEQLRLAGIAFSSTNEGIMITDKRNRIIDINRAYMNISGYGRDELIGKNPS 370 Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA---EGK 115 +L + I + E + E+ K+G + ++ V + Sbjct: 371 ILRSEHHSNEFYQSIWKSLEEER----HWQGEIWNRLKNGEVVPHWVNINAVHDPNTDAL 426 Query: 116 VYYLALVRDASVEMAQKEQTRQL--IIAVDHLDRPVIVLDPERHIVQCNRAFTEM 168 ++++++ D S A +E+ L A+ +L ++ H + A ++ Sbjct: 427 THFVSVIADISNIKASEEKLSHLAHHDALTNLPNRLLFSARLDHALTHREASEKI 481 >UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2Z8_DESAC Length = 1288 Score = 771 bits (1993), Expect = 0.0, Method: Composition-based stats. Identities = 189/879 (21%), Positives = 332/879 (37%), Gaps = 100/879 (11%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGY--KREEVIGNNIDML----- 60 + + + +F N + + + IG N + Sbjct: 421 QETARLLQHICDNVPDLIWAKDIEHHYIFTNKSNCRTLLCVDSTDIAIGKNHEFFSDKIL 480 Query: 61 --IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS--AEGKV 116 P D + + R R ++ G+ I + + Sbjct: 481 KEFPEDPLAYQFSELCCQSDSEVLRTRQSMRFQEVGHVKGTLICLDVYKAPFYGADGELI 540 Query: 117 YYLALVRDASVEMAQKE---QTRQLIIAVDHLDRPV-----------IVLDPERHIVQCN 162 + R + E ++ + +L + +++ + V D Sbjct: 541 GTVGSARIITREKQLEQETMRLSRLYRILSAVNQHIVHKPQPIELFQFVCDTLLEDTTF- 599 Query: 163 RAFTEMFGYCIS--------------EASGMQPDTLLNIPEFPADNRIRLQQLLWKTARD 208 G E G + N + + + Sbjct: 600 --AMAWIGLPNEMGVYKPVVSSGISLEVLGEPQHCIHNNGQLNHLTTNITAESAQEVLCP 657 Query: 209 QDEFLLLT---------------RTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQ 253 L G + + + + Q L D+ Sbjct: 658 TGYRLYQRSPFQAVASFPIQPKQAAGALLVVYTQDKKLLEQDDEQQLLDELVQDVAFALD 717 Query: 254 IRQLEGNILAAM-------------CSSPPFHEMGEII---CRNIESVLNESHVSLFA-- 295 + + E +M + E I R + + Sbjct: 718 VHEHEQQQAFSMKQLQLAATVFDNSREGIVLTDKNEKIVSVNRAFSDITGYRDDEVLGQT 777 Query: 296 ---LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGIL---QIKTSSGAETSAF 347 L++ + + W I R++DG L E S + Sbjct: 778 PRILKSNRHGRDFYQNMWHCLAEHGCWQGEIWNRRKDGQVYPELMSMSAVCDDQQEVSHY 837 Query: 348 IERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS---- 403 I DISQ ++S++ ++ L DP+T LPNR+ +LD V A Sbjct: 838 IAVFTDISQA--------KESQEKLDYLSWHDPLTDLPNRSLFCTHLDQAVKHAERKHHS 889 Query: 404 PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-N 462 V +DH +DV DS G+ D L ++ +R R L+ L R+ G +FVL+ + Sbjct: 890 FAVLCFDLDHFKDVNDSFGHLVGDALLRKIADRLRSCLRESDMLARLGGDEFVLLLEDVA 949 Query: 463 DVSNITQIADELRNVVSKPIMID--DKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDY 518 D +T +A+E+ + + +PI + D +++S+GI+ G++ LL A +A+ Sbjct: 950 DSHRVTMMAEEILHQLQQPICLTETDLEVQVSVSVGIAVYPEHGRDALELLQRADSALYR 1009 Query: 519 IRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEAL 578 +++G + +++ M E +ER+ L L++A+ + + YQPQ+ TG++ G EAL Sbjct: 1010 AKQHGRARFAYYNEEMTEQAQERVQLSFHLRQALEKKEFAVYYQPQVDLGTGQIVGAEAL 1069 Query: 579 ARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSA 638 RW+ P G V P RFIPLAEEIG I ++G W++ + C Q W L+VNLSA Sbjct: 1070 MRWNSPELGLVTPDRFIPLAEEIGCICSMGTWILRQVCEQGKAWLDAGYPPLTLAVNLSA 1129 Query: 639 LHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDD 698 + F + ++ + + G L +E+TES +M + + ++ L ++GV L++DD Sbjct: 1130 VQFAEEDIACRLKETLQETGYPAEYLELEVTESTLMHKEQQTIDLLKSLNELGVRLALDD 1189 Query: 699 FGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVET 758 FGTG+S L+ L P+ +K+DKSF+D + ++ AI +G L ++AEGVET Sbjct: 1190 FGTGYSSLAYLKYFPLHLLKVDKSFIDDLPADANDCKMVTAIVQMGHGLGFDLLAEGVET 1249 Query: 759 KEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPL 797 Q + L ++ C QGY+ S P+PA E S PL Sbjct: 1250 VAQRDCLAQLGCDYYQGYYCSPPVPACEFAALRQSQKPL 1288 Score = 48.4 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 23/153 (15%), Positives = 43/153 (28%), Gaps = 13/153 (8%) Query: 124 DASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTE-MFGYCISEA-SGMQP 181 + E Q+ R L D++ + D E H + N++ + ++ G Sbjct: 414 HIASERHQETA-RLLQHICDNVPDLIWAKDIEHHYIFTNKSNCRTLLCVDSTDIAIGKNH 472 Query: 182 DTL-------LNIPEFPADNRIRLQQLLWKTARDQDEFLLL---TRTGEKIWIKASISPV 231 + Q + R + G I + +P Sbjct: 473 EFFSDKILKEFPEDPLAYQFSELCCQSDSEVLRTRQSMRFQEVGHVKGTLICLDVYKAPF 532 Query: 232 YDVLAHLQNLVMTFSDITEERQIRQLEGNILAA 264 Y L V + IT E+Q+ Q + Sbjct: 533 YGADGELIGTVGSARIITREKQLEQETMRLSRL 565 >UniRef50_A0YYE1 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensors n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YYE1_9CYAN Length = 1090 Score = 771 bits (1993), Expect = 0.0, Method: Composition-based stats. Identities = 178/729 (24%), Positives = 315/729 (43%), Gaps = 51/729 (6%) Query: 106 ALSKVSAEGKVYYLALVRDAS---VEMAQKEQTRQLIIAVDHLDRPVIVLDP---ERHIV 159 + + S + + A+ + E + A++ +I+ D + I+ Sbjct: 358 SSRQFSGDDIHFIQAIANIIATAVARQQSTESLYLMERAINASSNGIIITDATETDHPII 417 Query: 160 QCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTG 219 N F + GY E L P+ + RL+ L + + + G Sbjct: 418 YVNAGFERITGYSKEEVIEQNC-RFLQGPQTDSSLVERLRTALLQGRECRVVIQNYRKDG 476 Query: 220 EKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFH------- 272 W I+PV++ HL + + +DITE + ++ + + Sbjct: 477 RLFWNDLQIAPVFNDRGHLTHFIGVQNDITERYEAQEEVRQTRNFLQTMIDHLPVAVFVK 536 Query: 273 -------EMGEIICRNIESVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWS 320 + + E + S V + + + A + + Sbjct: 537 EAYQEKLGRFRLWNKACEQLFGLSAVEVLGKTVYDVFPPEQAEFFHQQDQAVLSAGKVLD 596 Query: 321 ATIRQRDGAPAGILQIKTSSGAETSAF------IERVADISQHMAALALEQEKSRQHIEQ 374 + + G + T + + + DI++ ++++ + Sbjct: 597 IPEERVETQTLGQRILHTVKVPLLNHYPDTEYLLCIGEDITK--------RKQAEDQLRH 648 Query: 375 LIQFDPMTGLPNRNNLHNYLDDLVDKAVS-----PVVYLIGVDHIQDVIDSLGYAWADQA 429 +D +T LPNR N L + + V + +D+ + V DSLG+ DQ Sbjct: 649 HAFYDTLTNLPNRALFLNRLAHSIKQVQQTSGELFAVLFLDLDNFKRVNDSLGHQIGDQL 708 Query: 430 LLEVVNRFREKLKPDQYLCRIEGTQFVLVSL-ENDVSNITQIADELRNVVSKPIMIDDKP 488 L+ + R L+ L R+ G +F ++ N++++ ++A L + P + Sbjct: 709 LIAIARRLEGCLRSRDTLARLGGDEFTILLEQINNITDAIKVARHLHQQLMLPFNLSGNE 768 Query: 489 FPLTLSIGISYD---LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLG 545 +SIGI+ ++ + LL A +AM ++ G + F M+ ERL L Sbjct: 769 VFTNVSIGIALSCSRHEQHPEELLQNADSAMYRAKEMGKGAYAVFDTRMHRQAVERLQLE 828 Query: 546 AALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIE 605 + L+ A+ N+ ++ YQP + TGE+ G EAL RW +P G + P+ FIP+AEEIG I Sbjct: 829 SQLRRALELNEFQVYYQPIVSITTGEVIGFEALIRWLNPYKGFISPALFIPVAEEIGLIS 888 Query: 606 NIGRWVIAEACRQLAEWRSQN--IHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQ 663 IG+WV+ +AC QL WR Q +SVNLS+ R L Q+ + G+ H Sbjct: 889 KIGQWVLYQACEQLQVWRKQFPLFKNLTVSVNLSSQQLREPDLLEQIDQVLATTGLPSHC 948 Query: 664 LTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSF 723 L +EITES+++E+ + K ++ ++D + LS+DDFGTG+S LS L P+ +KID+SF Sbjct: 949 LKLEITESLLIENYDQALKILRQIQDRNIQLSLDDFGTGYSSLSYLHRFPINTLKIDRSF 1008 Query: 724 VDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLP 783 V R A+++AI + +L + +AEG+ET Q E L+ + C QG+ FS+ L Sbjct: 1009 VKRLKQNHENTAIIKAILRLANALAMNTIAEGIETVFQLEKLKGLGCEYGQGHLFSKALD 1068 Query: 784 AEEIPGWMS 792 A++I +S Sbjct: 1069 AQDITHLLS 1077 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 96/271 (35%), Gaps = 17/271 (6%) Query: 5 DADNAADGIFFPALEQNMMGAVLINE---NDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + + A+ + G ++ + + +++ N E++ GY +EEVI N L Sbjct: 384 QQSTESLYLMERAINASSNGIIITDATETDHPIIYVNAGFERITGYSKEEVIEQNCRFLQ 443 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYYL 119 + E +R G+ +Q +KDG W ++ V +++ Sbjct: 444 GPQTDSSLVERLRTALLQGREC----RVVIQNYRKDGRLFWNDLQIAPVFNDRGHLTHFI 499 Query: 120 ALVRDASVEMAQKEQTRQ----LIIAVDHLDRPVIVLDP----ERHIVQCNRAFTEMFGY 171 + D + +E+ RQ L +DHL V V + N+A ++FG Sbjct: 500 GVQNDITERYEAQEEVRQTRNFLQTMIDHLPVAVFVKEAYQEKLGRFRLWNKACEQLFGL 559 Query: 172 CISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV 231 E G + + ++ L D E + T+T + + P+ Sbjct: 560 SAVEVLGKTVYDVFPPEQAEFFHQQDQAVLSAGKVLDIPEERVETQTLGQRILHTVKVPL 619 Query: 232 YDVLAHLQNLVMTFSDITEERQIRQLEGNIL 262 + + L+ DIT+ +Q + Sbjct: 620 LNHYPDTEYLLCIGEDITKRKQAEDQLRHHA 650 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 42/424 (9%), Positives = 112/424 (26%), Gaps = 79/424 (18%) Query: 16 PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRH 75 ++ + + N A GY E++ + + D + A + Sbjct: 108 RFFSLSLDLLCIASFEGYFQRVNAAFVNTLGYTEAELLSVPLWEFVHPDDQAATKAELAE 167 Query: 76 NREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEM----AQ 131 +G + E + +DG W + + EG +Y A+ RD + Sbjct: 168 IAQG----KPSFNFENRYRCRDGDYRWLSWTSAPFVQEGLLY--AVARDVTEYKHSVAQL 221 Query: 132 KEQTRQLIIAVDHLDRPVIVLDPERHIVQC--------NRAFTEMF-------------- 169 + + Q + + ++ + + N F ++ Sbjct: 222 QSRIEQQATVAQLGQYALSQTNLDQLLTEISTLVAQTLNVHFVKILELLPNGSAFLLKAG 281 Query: 170 -GYCISEASGMQPDTLLNI--------------PEFPADNRIRLQQLLWKTARDQDEFLL 214 G+ + T + + + R + + LL ++ Sbjct: 282 VGWSSGLVGYARISTASHSHAGYTLAHKQPVVVEDLRVETRFKGEPLLHNHRIVSGMSVI 341 Query: 215 LTRTGEKIWI-KASISPVYDVLAHLQNLVMTFSDIT----EERQIRQLEGNILAAMCSSP 269 + E + + + ++I +Q + + A+ +S Sbjct: 342 IGEEDEPYGVLSLYSRSSRQFSGDDIHFIQAIANIIATAVARQQSTESLYLMERAINASS 401 Query: 270 PFHEMGE---------IICRNIESVLNESHVSLFALRNGMPIHWAS-----SSHGAEIQN 315 + + + E + S + + + Sbjct: 402 NGIIITDATETDHPIIYVNAGFERITGYSKEEVIEQNCRFLQGPQTDSSLVERLRTALLQ 461 Query: 316 AQSWSATIR--QRDGAPAG---ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQ 370 + I+ ++DG + + + FI DI+ E+ ++++ Sbjct: 462 GRECRVVIQNYRKDGRLFWNDLQIAPVFNDRGHLTHFIGVQNDIT--------ERYEAQE 513 Query: 371 HIEQ 374 + Q Sbjct: 514 EVRQ 517 Score = 83.1 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 35/267 (13%), Positives = 79/267 (29%), Gaps = 24/267 (8%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINEN----DEVMFFNPAAEKLWGYKREEVIGNNI 57 + + ++ + + +N A E+L+G EV+G + Sbjct: 510 EAQEEVRQTRNFLQTMIDHLPVAVFVKEAYQEKLGRFRLWNKACEQLFGLSAVEVLGKTV 569 Query: 58 DMLIPRDLRPAHPEYIRHNREGGK-ARVEGMSRELQLEKKDGSKIWTRFALSKVSA-EGK 115 + P + + + GK + E Q G +I + ++ Sbjct: 570 YDVFPPEQAEFFHQQDQAVLSAGKVLDIPEERVETQTL---GQRILHTVKVPLLNHYPDT 626 Query: 116 VYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 Y L + D + ++Q R D + + + NR + + Sbjct: 627 EYLLCIGEDITKRKQAEDQLRH-HAFYDT------LTNLPNRALFLNRLAHSI------K 673 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL 235 L + DN R+ L DQ + R + +++ + Sbjct: 674 QVQQTSGELFAVLFLDLDNFKRVNDSLGHQIGDQLLIAIARRL--EGCLRSRDTLARLGG 731 Query: 236 AHLQNLVMTFSDITEERQIRQLEGNIL 262 L+ ++IT+ ++ + L Sbjct: 732 DEFTILLEQINNITDAIKVARHLHQQL 758 Score = 76.6 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 18/128 (14%), Positives = 40/128 (31%), Gaps = 5/128 (3%) Query: 136 RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNR 195 ++ + + E + + N AF GY +E + ++ + A + Sbjct: 104 QERDRFFSLSLDLLCIASFEGYFQRVNAAFVNTLGYTEAELLSVPLWEFVHPDDQAA-TK 162 Query: 196 IRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIR 255 L ++ E R G+ W+ + +P L D+TE + Sbjct: 163 AELAEIAQGKPSFNFENRYRCRDGDYRWLSWTSAPFVQEG----LLYAVARDVTEYKHSV 218 Query: 256 QLEGNILA 263 + + Sbjct: 219 AQLQSRIE 226 >UniRef50_B6IWY2 Diguanylate cyclase, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IWY2_RHOCS Length = 979 Score = 770 bits (1990), Expect = 0.0, Method: Composition-based stats. Identities = 191/701 (27%), Positives = 313/701 (44%), Gaps = 40/701 (5%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ 180 LV E A +E+ +L +D++ +I LD + I NRA E+FG+ ++ G Sbjct: 275 LVERRRAEAALRERETRLSGIMDNVADGIITLDEDLRIETMNRAALELFGHAAADVVGKP 334 Query: 181 PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFL--LLTRTGEKIWIKASISPVYDVLAHL 238 TL++ ++ + L + E + RTG + + L Sbjct: 335 FVTLIDEGDWTRVAMALMACLRQSGDGRRRETWSEIQGRTGRNVTFSMAFGVSQMRLGDR 394 Query: 239 QNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMG----------EIICRNIESVLNE 288 + + DIT +Q Q + + + G +L Sbjct: 395 RTAICVVQDITRRKQAEQALRDSEERLKLAVRATRSGVFDVDYANGIFWWSPEFIEMLGY 454 Query: 289 SHV----------SLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQ--- 335 + + + A +R RDG+ I Sbjct: 455 EGSPPGQADLLFREILHPDDRPAALAQIERYLAGKSGDYHAFYRLRHRDGSLIWIEARGQ 514 Query: 336 IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLD 395 + D++ ++++ + + + DP+TGLPNR L + L Sbjct: 515 AIRDDRGRPVRITGTMTDVT--------DRKRFEEQLMYVSTHDPLTGLPNRTLLQDRLQ 566 Query: 396 DLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIE 451 D+A V L+ +D + V DSLG+ D+ L + R ++P + R+ Sbjct: 567 HAADQAERKGNSVAVLLLDLDRFKLVNDSLGHQVGDKLLRAISQRLASSVRPADTIGRLG 626 Query: 452 GTQFVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGK--NRDYL 508 +F++++ + + ++A+ + +S+P +D + +T SIGI+ G + L Sbjct: 627 ADEFLIIAEDLTEPQMAARVAETVLAGLSQPFGLDGQQLFITCSIGITLFPGDATDIGAL 686 Query: 509 LSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAE 568 L A AM + GGNG++FF+P MNE RL L AL+EAI Q +L YQP+ E Sbjct: 687 LRDADTAMHTAKSAGGNGYRFFTPEMNEAAVARLSLEHALREAIDQGQFELHYQPKASLE 746 Query: 569 TGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIH 628 T + G+EAL RW P G +PPS FIP+AEE G I IG WV+ A Q+ W + Sbjct: 747 TMQTVGVEALLRWRHPEMGMIPPSTFIPVAEETGMILAIGDWVLRAALEQINRWERAGLE 806 Query: 629 IPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILR 688 ++VN+S S+ +++ + +G+ L +EITE+ MM + I + LR Sbjct: 807 PLPVAVNVSVRQITSSHFADRIQSLLDEYGVRPDLLELEITETAMMSNMAFIADGLAELR 866 Query: 689 DMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLN 748 G+ ++VDDFGTG+S LS L LP+T +K+D+SFV + A+ I ++G+ L Sbjct: 867 GRGIRIAVDDFGTGYSSLSYLRRLPITTLKVDRSFVSEAPSNADTGAIAATIIAMGRQLG 926 Query: 749 LTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPG 789 LTVVAEG+ET+EQ + LR+ C QG+ P+PA E+ Sbjct: 927 LTVVAEGIETQEQLDFLRRHRCHEAQGFLIGFPVPAAELEA 967 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 98/267 (36%), Gaps = 13/267 (4%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + A + ++ G + ++E+ + N AA +L+G+ +V+G LI Sbjct: 280 RAEAALRERETRLSGIMDNVADGIITLDEDLRIETMNRAALELFGHAAADVVGKPFVTLI 339 Query: 62 PR-DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA 120 D + R+ G R E+Q F +S++ + + Sbjct: 340 DEGDWTRVAMALMACLRQSGDGRRRETWSEIQGRTGRNVTFSMAFGVSQMRLGDRRTAIC 399 Query: 121 LVRDASVEMAQKEQTR----QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYC---- 172 +V+D + ++ R +L +AV V +D I + F EM GY Sbjct: 400 VVQDITRRKQAEQALRDSEERLKLAVRATRSGVFDVDYANGIFWWSPEFIEMLGYEGSPP 459 Query: 173 -ISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV 231 ++ +L+ + PA + L K+ + L R G IWI+A + Sbjct: 460 GQADLL---FREILHPDDRPAALAQIERYLAGKSGDYHAFYRLRHRDGSLIWIEARGQAI 516 Query: 232 YDVLAHLQNLVMTFSDITEERQIRQLE 258 D + T +D+T+ ++ + Sbjct: 517 RDDRGRPVRITGTMTDVTDRKRFEEQL 543 >UniRef50_A6QA23 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QA23_SULNB Length = 703 Score = 770 bits (1990), Expect = 0.0, Method: Composition-based stats. Identities = 176/689 (25%), Positives = 328/689 (47%), Gaps = 26/689 (3%) Query: 132 KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG--MQPDTLLNIPE 189 ++ + +A+ ++ D H + + ++ EM GY E L + Sbjct: 11 EKIKERFELALCGSKTSILDWDMVNHTLYISPSWKEMLGYREDELPNAESTWKKLAYPRD 70 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 R + + ++ L + G IW+ +YD + +V T +DIT Sbjct: 71 IVNVMRSLKKHIREHRKVFENNHRLRHKDGHWIWVLGRARIIYDEAGNPIRMVGTHTDIT 130 Query: 250 EERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESHVSLFA----LRNG 299 EE++++ + + ++ + E + + + Sbjct: 131 EEKELQLKYSQQAQVLEQIHDAVILLDMDGFIRSWNKGSEILFEYRADEVIGKNFSILFS 190 Query: 300 MPIHWASSSHGAEIQNAQSWSAT--IRQRDGAPAGI---LQIKTSSGAETSAFIERVADI 354 I A +E++ + ++++ G P + + ET+ + + DI Sbjct: 191 DNITSAYEKWISELKENGEYKGEMFLQKKSGEPLYAVFSFSLLKNQNGETTEVVSLIHDI 250 Query: 355 SQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIG 410 ++ A A+ QE+ + D +T LPNR + L+ + K ++ I Sbjct: 251 TEQKKAEAVLQEQK-NILRYQAHHDALTRLPNRVLFFDRLEQSIRKTARSEKDFALFFID 309 Query: 411 VDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEN-DVSNITQ 469 +D + + DSLG++ D+ L R +E ++ + L R+ G +F ++ + + + Sbjct: 310 LDKFKHINDSLGHSIGDRVLRVTAKRIKETIRQEDTLARLSGDEFTVIMEDLGHPEDASV 369 Query: 470 IADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGW 527 +A+++ V+ KP+ ID+ ++ SIGIS + + LL A AM ++NG N + Sbjct: 370 LAEKILLVLQKPMYIDEYTLYISGSIGISLYPQDAMDTESLLKYADTAMYKAKENGRNTF 429 Query: 528 QFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHG 587 +F++P M E ER+ + +LKEAI +L + YQPQI A + G+EAL RW P G Sbjct: 430 EFYAPEMTEYALERIAMKTSLKEAIEKEELCVHYQPQIDARAECIIGVEALVRWQHPTRG 489 Query: 588 HVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLP 647 + P FI LAE+ G I +I +WV+ A +Q++ W + + L++N+S + Sbjct: 490 LLHPEAFISLAEDTGLIVDIDKWVMRTAMKQVSTWHQEGLVSDVLALNISIKQLEGHNFM 549 Query: 648 NQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLS 707 +++ + + L +EI E +M++ TE +R++ L MG+G+S+DDFGTG+S LS Sbjct: 550 EEIAACLDDFDFKPKWLELEIPEGQVMKNHTETIERLKELSVMGIGISIDDFGTGYSSLS 609 Query: 708 RLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRK 767 L LP+ +KIDKSF++ + +A+++AI ++ SL L V+AEGVET +Q + L + Sbjct: 610 LLKRLPINRLKIDKSFIEFIP-NEEDVAIVKAIIALANSLKLDVIAEGVETDDQKDFLVE 668 Query: 768 IHCRVIQGYFFSRPLPAEEIPGWMSSVLP 796 C IQGY++SRP+ +E++ ++ Sbjct: 669 NGCTKIQGYYYSRPIASEQMKHFLQKRQC 697 Score = 143 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 47/284 (16%), Positives = 100/284 (35%), Gaps = 9/284 (3%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEV--IGNNIDM 59 K T+ D F AL + + + + ++ +P+ +++ GY+ +E+ + Sbjct: 5 KKTEMDEKIKERFELALCGSKTSILDWDMVNHTLYISPSWKEMLGYREDELPNAESTWKK 64 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVY 117 L +R ++ + + +L KDG IW + A + Sbjct: 65 LAYPRD---IVNVMRSLKKHIREHRKVFENNHRLRHKDGHWIWVLGRARIIYDEAGNPIR 121 Query: 118 YLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 + D + E + + Q ++ + VI+LD + I N+ +F Y E Sbjct: 122 MVGTHTDITEEKELQLKYSQQAQVLEQIHDAVILLDMDGFIRSWNKGSEILFEYRADEVI 181 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 G L + A + L + + E L ++GE ++ S S + + Sbjct: 182 GKNFSILFSDNITSA--YEKWISELKENGEYKGEMFLQKKSGEPLYAVFSFSLLKNQNGE 239 Query: 238 LQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRN 281 +V DITE+++ + + + + R Sbjct: 240 TTEVVSLIHDITEQKKAEAVLQEQKNILRYQAHHDALTRLPNRV 283 Score = 81.2 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 65/149 (43%), Gaps = 7/149 (4%) Query: 15 FPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIR 74 LEQ +L++ + + +N +E L+ Y+ +EVIG N +L ++ A+ ++I Sbjct: 143 AQVLEQIHDAVILLDMDGFIRSWNKGSEILFEYRADEVIGKNFSILFSDNITSAYEKWIS 202 Query: 75 HNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRDASVEMAQK 132 +E G+ E+ L+KK G ++ F+ S + + ++L+ D + + + Sbjct: 203 ELKENGE-----YKGEMFLQKKSGEPLYAVFSFSLLKNQNGETTEVVSLIHDITEQKKAE 257 Query: 133 EQTRQLIIAVDHLDRPVIVLDPERHIVQC 161 ++ + + + ++ Sbjct: 258 AVLQEQKNILRYQAHHDALTRLPNRVLFF 286 >UniRef50_Q47FF8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FF8_DECAR Length = 996 Score = 770 bits (1989), Expect = 0.0, Method: Composition-based stats. Identities = 202/682 (29%), Positives = 320/682 (46%), Gaps = 29/682 (4%) Query: 133 EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPA 192 ++TR+ +D + P +LD E H + N AF G + + G D L E Sbjct: 324 DKTREGRALLDSIPDPAWLLDNEGHYLAVNEAFCHYKGLPMEQVLGHTVDELFPAEEAKV 383 Query: 193 DNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER 252 +L+ +++ E + L G+ + PVY + L D+TE Sbjct: 384 LRDGQLE--VYRKGGPVREVVWLHLRGKLSPFEFLRVPVYRDDGQPRGLAGVAWDMTERY 441 Query: 253 QIRQLEGNILAAMCSSPPFHEMGEIICRN---IESVLNESHVSLFALRNGMPIHWASSSH 309 + + + I + + + + ++V S SL L+ P Sbjct: 442 EAEERQRLITHFFDHANDAVLILDAERQVVTLNKAVTTISGYSLDDLKGRPPRFMLEGYQ 501 Query: 310 GA--------EIQNAQSWSATIR--QRDGAPAGI---LQIKTSSGAETSAFIERVADISQ 356 + W ++ ++DG+ I + + + + V D+S Sbjct: 502 DKVSLDELSLALNEQGVWRGEMKAVRKDGSLLPIYCNISSIRNDAGKVVNWAVFVTDLS- 560 Query: 357 HMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVDHIQD 416 E++ + IE L D +T LPNR + + + A + LI +D + Sbjct: 561 -------ERKAAEARIESLTHVDQLTELPNRQGFSRIMGEWLAAARKGALILIDLDQLSR 613 Query: 417 VIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF-VLVSLENDVSNITQIADELR 475 V D+ G+A D L + R R+ L+ +L R+ G QF VL++ +A +L Sbjct: 614 VNDAFGHAAGDAMLRRISVRLRKILRDGDFLGRLGGDQFGVLLAQGIRPVVAEVVARKLL 673 Query: 476 NVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPA 533 + +++P+MI+ T S GI G + LL A NA+ + + +G N ++FFS Sbjct: 674 DAIAQPVMIEGSDIVTTASAGICLLGSDGHDVASLLRNADNALHHAKDSGQNAFRFFSAD 733 Query: 534 MNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSR 593 MN + ERL L + L+ A+S N+L L YQPQ+ +GE+ G E+L RW P G V P Sbjct: 734 MNVRMAERLRLESDLRWALSRNELLLHYQPQVDINSGEIIGFESLLRWQHPELGMVSPVN 793 Query: 594 FIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDA 653 FIPLAEE I IG WV+ EACRQ W+ + ++VNLSA+ F + VS + Sbjct: 794 FIPLAEESRLILPIGTWVLEEACRQNKAWQDAGMAPKVVAVNLSAVQFHGADIVALVSQS 853 Query: 654 MHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLP 713 + G++ L +EITES+++E + + + L+ +GVGLS+DDFGTG+S LS L P Sbjct: 854 LQNSGLEARYLELEITESVIIEDPERVIRIMDELKMLGVGLSIDDFGTGYSSLSYLKRFP 913 Query: 714 VTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVI 773 + +IKID+SFV A++ + I + L V+AEGVET EQ E LR HC Sbjct: 914 IDKIKIDRSFVRDLEHNTNDAAIIRMVIGIAEELERKVIAEGVETVEQLEFLRSHHCDEY 973 Query: 774 QGYFFSRPLPAEEIPGWMSSVL 795 QG++ S +PA EIP ++S Sbjct: 974 QGFYCSPGVPAGEIPDLVASRQ 995 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 95/261 (36%), Gaps = 10/261 (3%) Query: 6 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 AD +G L+ A L++ + N A G E+V+G+ +D L P + Sbjct: 323 ADKTREG--RALLDSIPDPAWLLDNEGHYLAVNEAFCHYKGLPMEQVLGHTVDELFPAEE 380 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLALVR 123 + + R G RE+ G F V + + Sbjct: 381 AKVLRDG-----QLEVYRKGGPVREVVWLHLRGKLSPFEFLRVPVYRDDGQPRGLAGVAW 435 Query: 124 DASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDT 183 D + +E+ R + DH + V++LD ER +V N+A T + GY + + G P Sbjct: 436 DMTERYEAEERQRLITHFFDHANDAVLILDAERQVVTLNKAVTTISGYSLDDLKGRPP-R 494 Query: 184 LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVM 243 + + L L + + E + + G + I +IS + + + N + Sbjct: 495 FMLEGYQDKVSLDELSLALNEQGVWRGEMKAVRKDGSLLPIYCNISSIRNDAGKVVNWAV 554 Query: 244 TFSDITEERQIRQLEGNILAA 264 +D++E + ++ Sbjct: 555 FVTDLSERKAAEARIESLTHV 575 >UniRef50_Q2BB47 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BB47_9BACI Length = 1106 Score = 770 bits (1989), Expect = 0.0, Method: Composition-based stats. Identities = 180/827 (21%), Positives = 336/827 (40%), Gaps = 57/827 (6%) Query: 10 ADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAH 69 ++ ++ + + ++ N +V FN + +L+ Y + + G + + + Sbjct: 151 SEQMYRSLFDNHPDAVYSLDLNGDVTAFNDSLVRLFHYDPD-MHGISFRQFVAPESMSLV 209 Query: 70 PEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV-YYLALVRDASV- 127 + A+ + + + + G K + + ++ + +D + Sbjct: 210 MCMFK-----LAAKGKPQNYNMTGINRSGEKFDANITNIPIITDNQITGVFGIAKDITEL 264 Query: 128 ---EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPD-- 182 E ++ +L +A + + + EMFG E Sbjct: 265 AEKERKLQKAEERLNLAQKTANFGYWDYYFKEDSAYWSEHMYEMFGVSKDEFIPSFDYYK 324 Query: 183 TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 ++ + + L + E+ ++ + G+ + + + D + V Sbjct: 325 DFIHPEDLAPFLKNYH-ASLEEKTPADLEYRIIRKDGQVRRLHHQSTLILDGDGCPERAV 383 Query: 243 MTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI----------ICRN-IESVLNESHV 291 D+TE+R+I S ++G IC N I ++ + Sbjct: 384 GISRDVTEQREIEDRLAENTEQFKSFYNNSDVGVWSLDPAGKKVLICSNAILAIYGYTKK 443 Query: 292 SLFALRNGMPIHWASSSHGAEIQN---------AQSW---SATIRQRDGAPAGIL---QI 336 L+ P W S H ++Q + I RDG + Sbjct: 444 ELY----RDPRIWNRSIHPDDVQEVINNQNKISEGNIIRQQYRIITRDGKLKWVSDHLIP 499 Query: 337 KTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDD 396 VADI+ Q+++ +E L D MTGLPNR L+ Sbjct: 500 IYDEKGRLIRLDGIVADITA--------QKQAEAQMEFLAYHDYMTGLPNRRLFDQTLNG 551 Query: 397 LVD--KAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQ 454 L + + + +D + + D+LG+ DQ L E +R ++ + R+ G + Sbjct: 552 LFEGKNPEKFAIMYLDLDRFKHINDTLGHPIGDQVLKEAADRITASIRKGDFASRMGGDE 611 Query: 455 FVLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLST 511 F +++ + + +++A ++ + KP I+ +T SIGIS G + L Sbjct: 612 FAIIARNVESIEDASRLAAKITGTIQKPYEIEGYELFITASIGISLYPNNGSTPEELARN 671 Query: 512 AHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGE 571 A A+ + ++ G + Q ++ +MN ++ L ++ A+ ++Q + +QP+I T + Sbjct: 672 ADAALYHAKQMGKSSHQVYNASMNIESFKKYCLERDMRNALKDDQFYVEFQPKIEPRTHK 731 Query: 572 LYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPA 631 L G EAL RW+ P G V P FIP+AEE G I IG WVI ++ EW+ + + Sbjct: 732 LAGAEALLRWNHPDWGIVSPMEFIPVAEESGLIVEIGDWVIENVIAKMEEWQKGGLSLVP 791 Query: 632 LSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMG 691 +S+N+S F N L + D GI L +E+TES ++ + ++ + ++ L + Sbjct: 792 ISINVSGQRFYKNNLAEMIGDLCQKHGISPKLLELELTESSLIHYSDQVLQELEKLGQLK 851 Query: 692 VGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTV 751 + LS+DDFGTGFS L+ L +KIDKSF ++ + ++ + LN+ V Sbjct: 852 IKLSLDDFGTGFSSLTHLRKFRFNTLKIDKSFTKNIISNLEDATITSSLIDMAHGLNMKV 911 Query: 752 VAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLK 798 VAEGVE EQ + L+K C IQG+ FSRP+ ++ L Sbjct: 912 VAEGVEEFEQLDFLKKKGCDEIQGFLFSRPVSGIVFRDFLKEGYILP 958 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 47/386 (12%), Positives = 110/386 (28%), Gaps = 44/386 (11%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 + A ++++ +++ N AA K G+ EE+ + ++ P Sbjct: 31 YESLFLNTSDLAYILDKEGQILKVNEAAVKATGFSAEEIQKRGFFPFVCKEDLPKAETSF 90 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK-VYYLALVRDASVEMAQK 132 + +G ++ ++DG I + E + + + + +D + E K Sbjct: 91 QAVLQGSTQTHI-----FRINRRDGGLILLNSVAIPIIQENQTIGIIGISKDITAEENLK 145 Query: 133 E----QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 + + D+ V LD + N + +F Y + G+ + Sbjct: 146 QKLSISEQMYRSLFDNHPDAVYSLDLNGDVTAFNDSLVRLFHYDP-DMHGISFRQFVAPE 204 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 + +L K + R+GEK + P+ + + DI Sbjct: 205 SMSLVMC--MFKLAAKGKPQNYNMTGINRSGEKFDANITNIPII-TDNQITGVFGIAKDI 261 Query: 249 TEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIE--SVLNESHVSLFAL---------- 296 TE + + + + G E + +E +F + Sbjct: 262 TELAEKERKLQKAEERLNLAQKTANFGYWDYYFKEDSAYWSEHMYEMFGVSKDEFIPSFD 321 Query: 297 -------RNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGI---LQIKTSSGAETSA 346 + + E + I ++DG + + Sbjct: 322 YYKDFIHPEDLAPFLKNYHASLEEKTPADLEYRIIRKDGQVRRLHHQSTLILDGDGCPER 381 Query: 347 FIERVADISQHMAALALEQEKSRQHI 372 + D++ EQ + + Sbjct: 382 AVGISRDVT--------EQREIEDRL 399 Score = 85.0 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 40/264 (15%), Positives = 76/264 (28%), Gaps = 26/264 (9%) Query: 133 EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPA 192 E + +LD E I++ N A + G+ E + + P Sbjct: 26 ENIHIYESLFLNTSDLAYILDKEGQILKVNEAAVKATGFSAEEIQKRGFFPFVCKEDLPK 85 Query: 193 DNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER 252 Q + + + F + R G I + + P+ ++ DIT E Sbjct: 86 --AETSFQAVLQGSTQTHIFRINRRDGGLILLNSVAIPII-QENQTIGIIGISKDITAEE 142 Query: 253 QIRQLE----GNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSS 308 ++Q + + P ++ N+S V LF M Sbjct: 143 NLKQKLSISEQMYRSLFDNHPDAVYSLDLNGDVTA--FNDSLVRLFHYDPDMHGISFRQF 200 Query: 309 HG-------------AEIQNAQSWSATIRQRDGAPA--GILQIKTSSGAETSAFIERVAD 353 A Q+++ T R G I I + + + D Sbjct: 201 VAPESMSLVMCMFKLAAKGKPQNYNMTGINRSGEKFDANITNIPIITDNQITGVFGIAKD 260 Query: 354 ISQHMAALALEQEKSRQHIEQLIQ 377 I++ Q+ + + + L Q Sbjct: 261 ITELAEKERKLQK-AEERL-NLAQ 282 Score = 79.3 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 28/224 (12%), Positives = 68/224 (30%), Gaps = 37/224 (16%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINEND-EVMFFNPAAEKLWGYKREEVIGNNIDML 60 ++ D F + +G ++ +V+ + A ++GY ++E+ + + Sbjct: 394 EIEDRLAENTEQFKSFYNNSDVGVWSLDPAGKKVLICSNAILAIYGYTKKELY-RDPRIW 452 Query: 61 IPRDLRPAHPEYIRHNR--EGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYY 118 R HP+ ++ + + + ++ ++ +DG W L + E Sbjct: 453 ----NRSIHPDDVQEVINNQNKISEGNIIRQQYRIITRDGKLKWVSDHLIPIYDEKGRLI 508 Query: 119 L--ALVRDASVEMAQKEQTRQL-----------IIAVDHLDRP-----------VIVLDP 154 +V D + + + Q L D ++ LD Sbjct: 509 RLDGIVADITAQKQAEAQMEFLAYHDYMTGLPNRRLFDQTLNGLFEGKNPEKFAIMYLDL 568 Query: 155 ERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRL 198 + N G+ I + + + D R+ Sbjct: 569 D-RFKHINDT----LGHPIGDQVLKEAADRITASIRKGDFASRM 607 >UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1I4_ACIDE Length = 830 Score = 769 bits (1988), Expect = 0.0, Method: Composition-based stats. Identities = 198/805 (24%), Positives = 328/805 (40%), Gaps = 71/805 (8%) Query: 35 MFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLE 94 + + ++L G E +G + +P + RP E R EL Sbjct: 53 VDADEVFDQLRGTAIVEQLGAVARLGVPLECRPVVREPGRPVLA----------WELSAR 102 Query: 95 KKDGSKIWTRFA-LSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVI--V 151 + G I +S+V +EQ+ + Sbjct: 103 RVAGCSIMVTVRDVSEVETLRAALAACERSLEETRRELREQSDVFNTMEGLARTGHWRRI 162 Query: 152 LDPERHIVQCNRAFTEMFGYCISEASG--MQPDTLLNIPEFPADNRIRLQQLLWKTARDQ 209 DP ++ + ++ G+ E +L ++ K A Sbjct: 163 EDPGETVLLWSPGLCDIAGFDRQEWVSPERAVSGILPEDRHV------FEKAREKVAGAD 216 Query: 210 DEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEG---------- 259 E+ GE W+++ + + D+TEE + + Sbjct: 217 IEYRWRRPDGEVRWMRSRVRRARSGDGMRVEM-GVVQDVTEEHRSAEQLREQLLFIQRIA 275 Query: 260 ------------NILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASS 307 + A + E + N E V+ + + + ++ H S Sbjct: 276 SRIPGFIYEYRMHNDGASSVPYISDAVREFMGVNPEDVMRDHGLLMRSVVPDDAAHVRRS 335 Query: 308 SHGAEIQNAQSWSATIR--QRDGAPAG--ILQIKTSSGAETSAFIERVADISQHMAALAL 363 + A ++N W R DG+ I + DI+ Sbjct: 336 AV-ASLRNLAPWQCEYRVSMPDGSVRWHITNAIPHREPDGSVVSHGFTMDIT-------- 386 Query: 364 EQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVID 419 +++++ Q IE+L +D +TGLPNR L + L V + I +D+ +D+ D Sbjct: 387 DRKRAEQEIERLAFYDALTGLPNRRMLLDRLQRAVAATSRTQQFGALLFIDLDNFKDLND 446 Query: 420 SLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVS------NITQIADE 473 +LG+ D L +V R ++ + R G +FV++ +A++ Sbjct: 447 TLGHDMGDHLLSQVAARLLACVRETDTVARFGGDEFVVMLETLRPELTEAASQAEIVAEK 506 Query: 474 LRNVVSKPIMIDDKPFPLTLSIGISYDLGK--NRDYLLSTAHNAMDYIRKNGGNGWQFFS 531 L +++P + + T SIGI+ + + D LL A AM + G N +FF Sbjct: 507 LLASLNQPFALGGQQHYSTPSIGITLFGDERLSVDELLKRADLAMYQAKGAGRNTQRFFD 566 Query: 532 PAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPP 591 P M V R L A L++ ++ +L + YQP + L G+EAL RW P+ G + P Sbjct: 567 PDMQAAVNARSNLEADLRQGLARGELCVYYQPVVD-HRARLLGVEALVRWRHPVRGMISP 625 Query: 592 SRFIPLAEEIGEIENIGRWVIAEACRQLAEW-RSQNIHIPALSVNLSALHFRSNQLPNQV 650 + FIPLAE+ G I +G+ V+ AC QL W + ++SVN+SA FR +V Sbjct: 626 ADFIPLAEQTGLILPLGQQVLQTACGQLQRWGERKQTRHLSVSVNVSARQFRQPGFVAEV 685 Query: 651 SDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLV 710 + G D +L +E+TES+++ + R++ L+ GVG ++DDFGTG+S LS L Sbjct: 686 LQTLQGCGADPRKLKLELTESLLLGDVEDTIARMEQLKREGVGFALDDFGTGYSSLSYLK 745 Query: 711 SLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHC 770 LP+ ++KID+ FV LT+ A++ I ++ QSL+L VVAEGVET Q LR C Sbjct: 746 RLPLDQVKIDQGFVRDVLTDPNDAAIVRTILALAQSLDLEVVAEGVETTGQLAFLRLHGC 805 Query: 771 RVIQGYFFSRPLPAEEIPGWMSSVL 795 QGY F RP P E+I ++S L Sbjct: 806 EGFQGYLFGRPGPVEDIDAYLSHEL 830 >UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=4 Tax=Rhizobiaceae RepID=A6U700_SINMW Length = 772 Score = 769 bits (1986), Expect = 0.0, Method: Composition-based stats. Identities = 192/752 (25%), Positives = 328/752 (43%), Gaps = 65/752 (8%) Query: 108 SKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTE 167 ++ G + R + ++ L ++H+ + D E + N Sbjct: 23 RRLIDAGNRLADEVARLFPSQPDIADRHYWLEAMINHVPDYIYAKDTEGRFLIANEVTVA 82 Query: 168 MFGY-CISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQD--EFLLLTRTGEKIWI 224 G + + G L + EF +++L E ++T+ G W+ Sbjct: 83 DNGLESLQDLVGKTDFDL-HPHEFAQAVAGTERRVLETGEPIFGIEERAIVTK-GRDRWL 140 Query: 225 KASISPVYDVLAHLQNLVMTFSDITEERQIR---QLEGNILAAMCSSPPFHEMGEIICRN 281 S P+ + +V DIT+ + + + +L + P E + Sbjct: 141 MTSKVPLRSKSGKIIGIVGISRDITDRKSAERLLEGQARLLEMIAKGKPLTEFFNELVLL 200 Query: 282 IESVL-NESHVSLFALRNGMP---------------------IHWASSSHGAEIQNAQ-- 317 IE++L L +G I + S G + Sbjct: 201 IEALLPGIKGSILLLSEDGRHLLHGAAPSLDRAYSAAVHALEIGPNAGSCGTAAWRGEQV 260 Query: 318 -------------------------SWSATIRQRDGAPAGILQIKTSSGAETSAFIERVA 352 WS I R+ G + A + + Sbjct: 261 IVSDVYADPLWADYALLLKSSGLRSCWSTPILSRERKVLGTFALYAHEVATPCEQEQELI 320 Query: 353 DISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLD---DLVDKAVSPVVY-L 408 ++ H+A +A+E++++ I L D +TGLPNR +D + + + V Sbjct: 321 AMAAHLAGIAIERKRAEDRISFLAHHDALTGLPNRVLFEEQVDGMLEEIRERDQCAVLAF 380 Query: 409 IGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE--NDVSN 466 + +D+ + + DSLG+A D+ L V R R ++ ++ R+ G +F+++ + Sbjct: 381 LDLDNFKLINDSLGHAAGDELLKAVAGRMRASVRKADFVVRVGGDEFIILLNGLPKERDI 440 Query: 467 ITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDL--GKNRDYLLSTAHNAMDYIRKNGG 524 + +++R+ ++ P+ + + ++ S+G++ G+ LL+ A AM ++ G Sbjct: 441 VLSRLEDIRSAIAMPLQLQGRSLQVSCSMGVACFPNQGRTAGELLANADMAMYRAKELGR 500 Query: 525 NGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDP 584 + Q F+ M ERL L+EA++ + L +QPQ+ TG ++ EAL RW+ P Sbjct: 501 DNIQVFTEEMAARAHERLQWQEELREALAGEEFLLHFQPQMNLGTGRIFAAEALLRWNHP 560 Query: 585 LHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSN 644 + G + PS FIPLAEE G I IG W + ACRQL W+ + +SVN+SA FR Sbjct: 561 VRGIISPSVFIPLAEETGLIVPIGDWALRAACRQLKAWQDAGLPPLIISVNVSARQFRER 620 Query: 645 QLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFS 704 ++V++ + G++ L +E+TES++M+ + L +GV L++DDFGTG+S Sbjct: 621 NWASRVAEILKETGLEARYLELELTESLIMQDVPGAIATMHALEAIGVHLAIDDFGTGYS 680 Query: 705 GLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEM 764 LS L PV +KID+SFV + +A+ AI S+ Q L L V+AEGVE++ Q E Sbjct: 681 SLSALKRFPVRRLKIDRSFVTDIPLDADDMAITSAIISLAQKLGLRVIAEGVESEAQVEF 740 Query: 765 LRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLP 796 L+K C IQGYFFSRPL AE +SS P Sbjct: 741 LQKAGCDEIQGYFFSRPLSAEAFESLLSSARP 772 Score = 65.8 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 14/138 (10%), Positives = 37/138 (26%), Gaps = 6/138 (4%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGY-KREEVIGNNIDMLIPRDLRPAHPEY 72 + + + N G ++++G L P + A Sbjct: 53 LEAMINHVPDYIYAKDTEGRFLIANEVTVADNGLESLQDLVGKTDFDLHPHEFAQAVAGT 112 Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS--AEGKVYYLALVRDASVEMA 130 R E G+ E + G W + + + + + + RD + + Sbjct: 113 ERRVLETGE---PIFGIEERAIVTKGRDRWLMTSKVPLRSKSGKIIGIVGISRDITDRKS 169 Query: 131 QKEQTRQLIIAVDHLDRP 148 + ++ + + Sbjct: 170 AERLLEGQARLLEMIAKG 187 >UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H6_9PROT Length = 837 Score = 768 bits (1985), Expect = 0.0, Method: Composition-based stats. Identities = 162/638 (25%), Positives = 296/638 (46%), Gaps = 40/638 (6%) Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF-SDI 248 + +Q +W + + G + + + + I Sbjct: 211 LASAAITFMQSSIWDMPWWG--WHMQRLAGYTLTLWLVVKTAKTIEGKTLLSNRLLKQQI 268 Query: 249 TEERQIRQLEGNILAAMC--SSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWAS 306 + +Q A + + I R ++ N + S + P +S Sbjct: 269 EDRKQAENQLRIAATAFETHEAIMITDAHANIIRVNQAFQNITGYSPEDVIGKNPRVLSS 328 Query: 307 SS--------HGAEIQNAQSWSATI--RQRDGAPAG---ILQIKTSSGAETSAFIERVAD 353 + + SW+ I ++++G + + T+ ++ +D Sbjct: 329 GRQGSEFYAAMWKRLLGSGSWTGEIWDKRKNGEVYPKWLTITAVKDNEGVTTEYVAIFSD 388 Query: 354 ISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLI 409 I+ ++ + + I L +D +T LPNR +L + ++ + + + Sbjct: 389 ITL--------RKHAEEEIYTLAFYDSLTKLPNRRHLLDRINQARSISARSNHYGALLFL 440 Query: 410 GVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSN--- 466 +D + + D+LG+ + D L+EV R R ++ + RI G +FV++ E N Sbjct: 441 DMDRFKILNDTLGHDYGDLFLVEVSRRMRNCVRDMDTVARIGGDEFVVLIEEIGTDNEEV 500 Query: 467 ---ITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLG--KNRDYLLSTAHNAMDYIRK 521 + IA+++R +++P ++ DK + SIG+ LG ++ D LL A AM ++ Sbjct: 501 STKVALIAEKIRAALTEPYLLKDKEHHSSPSIGVCLYLGNEESVDTLLRHADLAMYQAKE 560 Query: 522 NGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARW 581 +G NG +FF PAM V+ R L A ++ A++ QL+L YQ Q+ G EAL RW Sbjct: 561 SGRNGVRFFDPAMQLAVETRAALEADMRHAVTGKQLRLYYQIQL-TSDHRPLGAEALIRW 619 Query: 582 HDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRS-QNIHIPALSVNLSALH 640 P+ G V P++FIP+AEE I IG WV+ AC+QL W + L++N+SA Sbjct: 620 MHPVRGLVSPAQFIPIAEESSLILEIGHWVLETACKQLVLWSKHERTRNLILAINVSAQQ 679 Query: 641 FRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFG 700 F + + VS +H ++ ++L +E+TES+++ ++ ++ L+ +GV L++DDFG Sbjct: 680 FNKHDFVDTVSTLLHLHQLNPNRLKLELTESVVLSDVADVVSKMHALKALGVKLALDDFG 739 Query: 701 TGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKE 760 TG+S LS L LP+ +IKID+SFV T+ +++ I ++ + + V+AEGVET++ Sbjct: 740 TGYSSLSYLKQLPLDQIKIDRSFVSDVTTDPSDAVMVQTIINLAHNFRMNVIAEGVETED 799 Query: 761 QFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLK 798 Q L++ C QG+ F +P+P +E + L Sbjct: 800 QLNFLKQNGCMAYQGFLFGKPMPIDEFEALLGQTQTLA 837 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 70/222 (31%), Gaps = 5/222 (2%) Query: 76 NREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALV-RDASVEMAQKEQ 134 + + +Q +W +K + L+ + + Q Sbjct: 218 FMQSSIWDMPWWGWHMQRLAGYTLTLWLVVKTAKTIEGKTLLSNRLLKQQIEDRKQAENQ 277 Query: 135 TRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADN 194 R A + +++ D +I++ N+AF + GY + G P +L+ ++ Sbjct: 278 LRIAATAFE-THEAIMITDAHANIIRVNQAFQNITGYSPEDVIGKNP-RVLSSGRQGSEF 335 Query: 195 RIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQI 254 + + L + E + GE +I+ V D V FSDIT + Sbjct: 336 YAAMWKRLLGSGSWTGEIWDKRKNGEVYPKWLTITAVKDNEGVTTEYVAIFSDITLRKHA 395 Query: 255 RQLEGN--ILAAMCSSPPFHEMGEIICRNIESVLNESHVSLF 294 + ++ P + + I + +H Sbjct: 396 EEEIYTLAFYDSLTKLPNRRHLLDRINQARSISARSNHYGAL 437 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 32/228 (14%), Positives = 74/228 (32%), Gaps = 19/228 (8%) Query: 2 KLTDADN-AADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 ++ D + ++ + + ++ N A + + GY E+VIG N +L Sbjct: 267 QIEDRKQAENQLRIAATAFETHEAIMITDAHANIIRVNQAFQNITGYSPEDVIGKNPRVL 326 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YY 118 + G + E+ ++K+G ++ V V Y Sbjct: 327 SSGRQGSEFYAAMWKRLLGS----GSWTGEIWDKRKNGEVYPKWLTITAVKDNEGVTTEY 382 Query: 119 LALVRDASVEMAQKEQTRQL--IIAVDHLDRPVIVLDPERHIVQCNRA--------FTEM 168 +A+ D ++ +E+ L ++ L +LD + F +M Sbjct: 383 VAIFSDITLRKHAEEEIYTLAFYDSLTKLPNRRHLLDRINQARSISARSNHYGALLFLDM 442 Query: 169 FGYC-ISEASGMQPDTLLNIPEFPADN-RIRLQQLLWKTARDQDEFLL 214 + +++ G L + +R + + D+ L+ Sbjct: 443 DRFKILNDTLGHDYGDLFLVEVSRRMRNCVRDMDTVARIGGDEFVVLI 490 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 768 bits (1985), Expect = 0.0, Method: Composition-based stats. Identities = 196/875 (22%), Positives = 358/875 (40%), Gaps = 105/875 (12%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 A + L+ + + + ++ R E++G + ++P + Sbjct: 183 LVALNQRLQSTLDALPDLLFETDMDGRYLAYHS--------PRSELLGKTLHRVLPVAVA 234 Query: 67 PAHPEYIRHNREGGKARVEGMS---------RELQLEKKDG--SKIWTRFALSKVSAEGK 115 + G + + + EL +K G T LS+ E K Sbjct: 235 DICLAAVHEANAVGYSHGKQIQLALPDGAHWFELSASRKPGLPGDAPTFIVLSRDITERK 294 Query: 116 VYYLALVRDASVEMAQKEQTRQLIIAVDHL-----------------DRPVIVLDPERHI 158 + + R + A + + ++ D + +LD + Sbjct: 295 KAEIKIERLTKLYAALSQCNQAIVRCSDASELFPIICRDAVNFGGMKMAWIGMLDEADQL 354 Query: 159 VQCNRAFTEMFGYCISEASGMQPDTLLNIP--EFPADNRIRLQQLLW-KTARDQDEFLLL 215 ++ A + FG + G++ L+ P IR + W + + D Sbjct: 355 IK--PAAS--FGSGVEYLEGIEISVDLSGDKGRGPTGTSIREDRPFWCQDFQHDDATAAW 410 Query: 216 TRTGEKI-WIKASISPVYD------------------VLAHLQNLVMTFSDIT------- 249 GE+ W ++ P++ A L+ DI+ Sbjct: 411 HERGERFGWGASASLPLHLKDRVIGAFTLYAGEACAFDEAAQNLLLEMALDISFALDRFA 470 Query: 250 ---EERQIRQLEG----NILAAMCSSPPFHEMGEII-------CRNIESVLNESHVSLFA 295 E + ++ A +SP + ++ E + H + Sbjct: 471 DERERKIMQDDLRDSEERYRKAFQTSPDAVNITRLVDGLYVDVNTGFERITGWRHDEVVG 530 Query: 296 LRNGMPIHW----ASSSHGAEIQNAQSW---SATIRQRDGAPA-GILQIKTSSGAETSAF 347 W +Q+ AT +++G G++ + + Sbjct: 531 KTATELNLWGNPADRMRLVDALQSEGRCNNLEATFVKKNGDIFHGLMSAEKVRFKDVDCI 590 Query: 348 IERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP--- 404 + DI+ E++ + I+QL FD +TGLPNR+ LH+ + A Sbjct: 591 LSITRDIT--------EKKLAEAQIQQLAHFDQLTGLPNRSQLHDRFRYALSLAQRHGDQ 642 Query: 405 -VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEND 463 + + +DH +++ D+LG++ DQ L++V R + L+ + L R+ G +F+L+ D Sbjct: 643 LAIMFLDLDHFKNINDTLGHSVGDQLLVDVSRRLKAALREEDSLSRLGGDEFILLLPGTD 702 Query: 464 VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRK 521 + +Q+A +L V++P I+ T+SIGI+ G++ + L A AM +++ Sbjct: 703 EAQASQVATKLLAAVAQPCQIEQNELVSTVSIGIALYPNDGQDFETLSKNADAAMYRVKQ 762 Query: 522 NGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARW 581 N ++FF+ M L L AL+ A+ ++ +L +QPQ+ + G + G EAL RW Sbjct: 763 ASRNDFRFFTQEMQTHSARTLQLVNALRHALPRHEFELHFQPQVALQDGHIVGAEALLRW 822 Query: 582 HDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHF 641 P G + P+ FIP+AE+ G+I IG WV+ A RQL +W + ++VNLSA+ F Sbjct: 823 RHPELGMISPAEFIPIAEDSGQILAIGEWVLRTAVRQLKQWLDAGLRPMVIAVNLSAVQF 882 Query: 642 RSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGT 701 R L V+ + + L +E+TE+ M+ + L + G+ +S+DDFGT Sbjct: 883 RHPNLMALVTRILDEAALPPEFLELELTEAAAMDDPPAAIAIMNKLDEHGIRMSIDDFGT 942 Query: 702 GFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQ 761 G+S LS L V ++KID+SFV + A++ AI ++ SL + +AEGVET Q Sbjct: 943 GYSSLSYLKKFKVNKLKIDQSFVRDISDDPDDKAIVTAIINLASSLGMHTIAEGVETASQ 1002 Query: 762 FEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLP 796 LR C +QGY+ S+PLP ++ ++ + + Sbjct: 1003 LAFLRLQGCDEVQGYYVSKPLPKDQFEAFVRNSIS 1037 Score = 88.1 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 55/155 (35%), Gaps = 7/155 (4%) Query: 3 LTDADNAADGIFFPALEQNMMGAVLINE-NDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + D ++ + A + + + + + N E++ G++ +EV+G L Sbjct: 478 MQDDLRDSEERYRKAFQTSPDAVNITRLVDGLYVDVNTGFERITGWRHDEVVGKTATEL- 536 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLAL 121 +P + ++ + E KK+G + KV + L++ Sbjct: 537 ---NLWGNPADRMRLVDALQSEGRCNNLEATFVKKNGDIFHGLMSAEKVRFKDVDCILSI 593 Query: 122 VRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDP 154 RD + + + Q +QL + L + D Sbjct: 594 TRDITEKKLAEAQIQQLAHFDQLTGLPNRSQLHDR 628 Score = 57.3 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 26/199 (13%), Positives = 57/199 (28%), Gaps = 20/199 (10%) Query: 126 SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 + + ++L +D L + D + + + SE G +L Sbjct: 178 AQAVELVALNQRLQSTLDALPDLLFETDMDGRYLA--------YHSPRSELLGKTLHRVL 229 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 + + + L G W + S S + ++ Sbjct: 230 PVAVADICLAAVH-EANAVGYSHGKQIQLALPDGAH-WFELSASRKPGLPGDAPTFIVLS 287 Query: 246 SDITEERQIRQLEGNIL----------AAMCSSPPFHEMGEIICRNIESVLNESHVSLFA 295 DITE ++ + A+ E+ IICR+ + + Sbjct: 288 RDITERKKAEIKIERLTKLYAALSQCNQAIVRCSDASELFPIICRDAVNFGGMKMAWIGM 347 Query: 296 LRNGMPIHWASSSHGAEIQ 314 L + ++S G+ ++ Sbjct: 348 LDEADQLIKPAASFGSGVE 366 >UniRef50_C6E953 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=C6E953_GEOSM Length = 953 Score = 768 bits (1984), Expect = 0.0, Method: Composition-based stats. Identities = 199/817 (24%), Positives = 347/817 (42%), Gaps = 44/817 (5%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIG--NNIDMLIP 62 + + A +G+ N ++ ++ G + E V ++ ++ Sbjct: 142 ERIRRREQQLSQAERITHLGSWEWNLESGETVWSDELYRILGLEPESVAATFESLLRMVH 201 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAE-GKVYYLAL 121 R + ++ RE G A +L + DG R L V G+ + Sbjct: 202 PADRETMEKAVQQLRETGSALGIQY---YRLLRADGETRIVRGQLESVRDGSGRQTVIGA 258 Query: 122 VRDASVEM----AQKEQTRQLIIAVDHLDRPVIVLDP-ERHIVQCNRAFTEMFGYCISEA 176 D + A + R+ + + + I++ N AF + GY E Sbjct: 259 CHDVTELKWAEAALRASERRFSKIFQATPDLLSITSLKDGTILEVNEAFLRVLGYQRQEV 318 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 G L + LQQL + E L R G ++ S + ++ Sbjct: 319 IGTYAGELGLWADSDQP-AALLQQLEERGEVRDIEVRLKGRNGRELEGLVSAELI-EING 376 Query: 237 HLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESH 290 + L+ F DI+E +++ + + A + SS + E + Sbjct: 377 NP-YLLTLFKDISERKRLEEDRARLAAIVESSDDAIMAVDREGAITSWNAGAEKMFGYCA 435 Query: 291 VSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIER 350 + + + + + + DGA + + G Sbjct: 436 QDMKGVHLSFLVSPEKKEQVTCLNDG-------IRSDGAVTHCEVVHVTRGGSQIYVSLT 488 Query: 351 VADI---------SQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA 401 ++ I + +A E+ + + I+ Q D +T LPNR ++L+ + +A Sbjct: 489 MSPIKSADGGIVGTSCIARDVTERTRMEEIIKHQAQHDTLTDLPNRKLFGDFLNLELAQA 548 Query: 402 VS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVL 457 V + +DH + V DSLG+A D+ L V R + ++ + RI G +F + Sbjct: 549 RRNRKSLAVLFMDLDHFKKVNDSLGHAAGDRLLQAVAQRLKRCVRESDTVARISGDEFNV 608 Query: 458 VSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHN 514 + + ++ + ++ V P +++ +T S+G+S G + LL A Sbjct: 609 LMPDLTQTDDVGIVVGKIMGVFRTPFVLEGAELKVTTSVGVSMFPDDGDSAQELLQKADG 668 Query: 515 AMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYG 574 AM ++ GN +QF++ +N R + L+EA+S ++L LVYQP + E+GE+ G Sbjct: 669 AMYVAKQTPGNSYQFYNGEINARTVARQNMERRLREAVSKDELDLVYQPLLSLESGEIVG 728 Query: 575 IEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSV 634 EAL RWH P HG + P++F+P+AEE G I IG WV+ ACRQ+ W+SQ +++V Sbjct: 729 AEALLRWHHPEHGLLLPAQFLPVAEETGAIVPIGEWVLFNACRQMRLWQSQGF-DLSVAV 787 Query: 635 NLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGL 694 NLS F + A+ G+D L +++TE +M++ + ++ L D+GV Sbjct: 788 NLSNREFHQPNFIDLAMRALSQSGLDPASLELDVTEKAIMDNPAFSLRNMRRLTDIGVAF 847 Query: 695 SVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAE 754 SVDDFG G S LSR+ LP+ ++KID+SF+ LTE L ++ A+ + SL + V A Sbjct: 848 SVDDFGVGASSLSRIKELPIAKVKIDRSFIRDILTEPNDLDVVSAVICMSHSLKMRVNAV 907 Query: 755 GVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 GVE+ EQ ++ C +QG SRPLP E + Sbjct: 908 GVESAEQLALVGSFGCDEVQGDLISRPLPPHEFERLL 944 Score = 174 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 51/262 (19%), Positives = 104/262 (39%), Gaps = 6/262 (2%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINE-NDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 A A++ F + + + + ++ N A ++ GY+R+EVIG L Sbjct: 269 EAALRASERRFSKIFQATPDLLSITSLKDGTILEVNEAFLRVLGYQRQEVIGTYAGELGL 328 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALV 122 ++ E G+ R E++L+ ++G ++ + + G Y L L Sbjct: 329 WADSDQPAALLQQLEERGEVR----DIEVRLKGRNGRELEGLVSAELIEINGNPYLLTLF 384 Query: 123 RDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPD 182 +D S +E +L V+ D ++ +D E I N +MFGYC + G+ Sbjct: 385 KDISERKRLEEDRARLAAIVESSDDAIMAVDREGAITSWNAGAEKMFGYCAQDMKGVHLS 444 Query: 183 TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 L++ + + A E + +TR G +I++ ++SP+ + Sbjct: 445 FLVSPEKKEQVTC-LNDGIRSDGAVTHCEVVHVTRGGSQIYVSLTMSPIKSADGGIVGTS 503 Query: 243 MTFSDITEERQIRQLEGNILAA 264 D+TE ++ ++ + Sbjct: 504 CIARDVTERTRMEEIIKHQAQH 525 >UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K2_9PROT Length = 925 Score = 768 bits (1984), Expect = 0.0, Method: Composition-based stats. Identities = 154/567 (27%), Positives = 268/567 (47%), Gaps = 35/567 (6%) Query: 253 QIRQLEGNILAAMCSSPPFHEMGEIICRNIESVL---NESHVSLFA-----LRNGMPIHW 304 + S + II + + + L+ Sbjct: 360 ETDLRIAATAFESEESMIITDSRGIILKVNQVFTATTGYTSEEAVGKTPSLLKTDRHSAE 419 Query: 305 ASSSHGAEIQNAQSWSATI--RQRDGAPAGILQ---IKTSSGAETSAFIERVADISQHMA 359 +I+ W I ++++G L S + ++ D++ Sbjct: 420 FYHEMWRQIKQTGKWQGEIWDKRKNGEIYPKLLNIYAVKSKNGVVTHYVGSYTDLT---- 475 Query: 360 ALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQ 415 E++ + + I L +D +TGLPNR L + L+ + + + I +D + Sbjct: 476 ----ERKMAEEKIISLAFYDTLTGLPNRRLLLDRLNYALASGLRTGKNGALLFIDLDKFK 531 Query: 416 DVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIA---- 471 + D+LG+ D L +V +R + ++ + RI G +FV++ + ++ ++ A Sbjct: 532 TLNDTLGHDIGDLLLKQVAHRLKACVREIDTVARIGGDEFVVMLEDLNIESVEAAAQTEV 591 Query: 472 --DELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGW 527 +++ + P + F ++SIGIS G+++D L A AM +K+G N Sbjct: 592 IGEKILAALRMPYQLLTNEFHSSVSIGISLFSNNGQSQDEPLKQADIAMYQAKKSGRNKL 651 Query: 528 QFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHG 587 +FF M + + R L A L++A++N QL+L YQ Q+ + + G E L RW P++G Sbjct: 652 RFFDQRMQDTISSRANLEAELRKALANEQLQLHYQIQVDSA-HQTIGAEVLLRWIHPVNG 710 Query: 588 HVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNI-HIPALSVNLSALHFRSNQL 646 + P++F+P+AEE G I IG WV+ AC QL +W+ L++N+SA F N Sbjct: 711 IISPAQFVPVAEETGLILPIGLWVLETACAQLKKWQDNPATAQLILAINVSARQFHQNGF 770 Query: 647 PNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGL 706 +V + I+ L +E+TE M++ + + ++ L++ GV S+DDFGTG+S L Sbjct: 771 ATEVRSVIERHDINPALLKLELTEGMLLNNLDDTIATMRSLQEFGVQFSLDDFGTGYSSL 830 Query: 707 SRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLR 766 L LP+ ++KID+SFV T A++ I ++ SLNL V+AEGVET+ Q ++L Sbjct: 831 QYLKRLPLAQLKIDQSFVRDLATGYNDQAIVRTIIAMAHSLNLNVIAEGVETEIQRQILL 890 Query: 767 KIHCRVIQGYFFSRPLPAEEIPGWMSS 793 K C QGY F +P+P E+ +SS Sbjct: 891 KNQCSHFQGYLFGKPMPIEQFESLLSS 917 Score = 100 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 60/147 (40%), Gaps = 4/147 (2%) Query: 114 GKVYYLALVRDASVEMA--QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY 171 G +++ +L + A + R A + + +I+ D I++ N+ FT GY Sbjct: 340 GLIFFSSLKHARTHVRAQLAETDLRIAATAFE-SEESMIITDSRGIILKVNQVFTATTGY 398 Query: 172 CISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPV 231 EA G P LL A+ + + + +T + Q E + GE +I V Sbjct: 399 TSEEAVGKTPS-LLKTDRHSAEFYHEMWRQIKQTGKWQGEIWDKRKNGEIYPKLLNIYAV 457 Query: 232 YDVLAHLQNLVMTFSDITEERQIRQLE 258 + + V +++D+TE + + Sbjct: 458 KSKNGVVTHYVGSYTDLTERKMAEEKI 484 Score = 87.7 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 46/152 (30%), Gaps = 8/152 (5%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 D ++ ++ + ++ N GY EE +G +L Sbjct: 358 LAETDLRIAATAFESEESMIITDSRGIILKVNQVFTATTGYTSEEAVGKTPSLLKTDR-- 415 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YYLALVRD 124 H H + E+ ++K+G + V ++ V +Y+ D Sbjct: 416 --HSAEFYHEMWRQIKQTGKWQGEIWDKRKNGEIYPKLLNIYAVKSKNGVVTHYVGSYTD 473 Query: 125 ASVEMAQKEQT--RQLIIAVDHLDRPVIVLDP 154 + +E+ + L ++LD Sbjct: 474 LTERKMAEEKIISLAFYDTLTGLPNRRLLLDR 505 >UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y791_LEPCP Length = 1066 Score = 767 bits (1983), Expect = 0.0, Method: Composition-based stats. Identities = 202/864 (23%), Positives = 352/864 (40%), Gaps = 97/864 (11%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 A A++ + + L + + + AEKL E ++G I + Sbjct: 209 AALAASEAHLRTFMRAMPDVSFLFDRDGRYLDVFGPAEKLA-EPVERMLGRRIADVHGER 267 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRD 124 IR E + + + E+Q W + V + + + D Sbjct: 268 HVELFMSVIRLALETREPQRCEFALEVQQ-----GTRWFEARVCAVPD--REQVVWVSWD 320 Query: 125 ASVEMAQK---EQTRQLIIAVDHLDRPVIVLDPERHIVQ--CNRAFTEMFGY-------- 171 S A + + +L + +++ + E + CN A + G+ Sbjct: 321 ISERRAAELRVTELTRLYSFISQVNQAFVWTRSEAELFDRICNVAISH--GHLRLAWVVQ 378 Query: 172 ------CISEASGMQPDTLLN------IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTG 219 A TL++ P + Q LL T + + + G Sbjct: 379 RDGAASAPRVAVQRGDSTLVHLCAASLPPATHSHAMAVSQSLLTGTVQWRPGS--VKPAG 436 Query: 220 EKIWIKASISPVYDVLAHLQNLVMT-------------------------FSDITEERQI 254 E + PV ++ + +V+ + T E Q Sbjct: 437 EA-PLDLVSVPVRNLNQVVAAVVLVGNKLDPEDREQQALIAELGSDMSHALAQFTREAQW 495 Query: 255 RQLEGN---ILAAMCSSPPFHEMGEI---ICRNIESVLNESHVSLFALRNGMPIHWASSS 308 ++ AA+ S+ + ++ I + + S P S Sbjct: 496 QESLARTRLHAAALESTQDGVMVTDLRPRIVSVNRAFTEITGYSETEAVGMSPRLLQSGR 555 Query: 309 H--------GAEIQNAQSWSATI--RQRDGAPAGIL---QIKTSSGAETSAFIERVADIS 355 H ++ W + R+++G + + ++ DI+ Sbjct: 556 HEPAFFTRLWNQLLTHGRWQGEVQNRRKNGELYTQWMSVSTVRDEHDQPTHYVSVFTDIT 615 Query: 356 QHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA----VSPVVYLIGV 411 Q+++ Q ++ L FDP+T LPNR + + L+ + A V I + Sbjct: 616 P--------QKEAEQRLQHLAHFDPLTQLPNRLMVLSRLEHAIASAARAERRVAVLFIDL 667 Query: 412 DHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQI 470 D+ + V DSLG++ D L V +R + + + L R+ G +F+L+ + + Q+ Sbjct: 668 DNFKTVNDSLGHSAGDDLLRAVADRLGTRTRREDTLGRLGGDEFILMLEHLREPQDAAQV 727 Query: 471 ADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQ 528 A EL ++ P + + + SIGIS D G L+ A AM ++ G ++ Sbjct: 728 AQELIGLLETPFRVAGQEVYVQASIGISLYPDDGLEVGELVRDADAAMYQAKRAGRGVYR 787 Query: 529 FFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGH 588 F++ ++ + RL L L+ A+ N + L YQP L G+EAL R + P Sbjct: 788 FYTESLTTAAQSRLALDTRLRRALENKEFVLWYQPLYRLADRCLIGLEALVRLNQPGLPP 847 Query: 589 VPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPN 648 + P+ FIPL EE G+I +G WV EACRQ W + + +++NLS R Q Sbjct: 848 IGPAEFIPLLEETGQITTLGAWVTQEACRQGRAWLDEGLDFGRIAINLSPQEIRRGQTDE 907 Query: 649 QVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSR 708 +V +A+ G+ +L +E+TES +ME + LR +GV L++DDFGTG+S L+ Sbjct: 908 RVREALERSGLPAERLELELTESGLMEQGERAEAFLHRLRALGVRLAIDDFGTGYSSLAY 967 Query: 709 LVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKI 768 L PV+++KID+SFV + L++ + S+G++L ++V+AEGVET+ QF+ LR + Sbjct: 968 LKRFPVSKLKIDRSFVRDLPADANDAQLVQTMVSMGRNLGISVLAEGVETEAQFDYLRSL 1027 Query: 769 HCRVIQGYFFSRPLPAEEIPGWMS 792 C QGYFFS P PA+E W+ Sbjct: 1028 GCDAAQGYFFSPPRPADEARHWLR 1051 Score = 58.8 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 28/200 (14%), Positives = 60/200 (30%), Gaps = 16/200 (8%) Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQL---EKKDGSKIWTRFALSKVSAEGKVYYLA 120 D R +R R + R+L+L + D + W + + + + Sbjct: 137 DDREGAAVALRVARAPLDLAAMALERQLRLHSQVRID-HQRWLTLFTLGLLSALAITLMG 195 Query: 121 LVRDASVEM-----AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISE 175 ++ S + A L + + + D + + ++ + Sbjct: 196 VLMRLSRQRNESDAALAASEAHLRTFMRAMPDVSFLFDRDGRYLDVFGPAEKLAE-PVER 254 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL 235 G + + + ++ L + EF L + G W +A + V D Sbjct: 255 MLGRRIADV-HGERHVELFMSVIRLALETREPQRCEFALEVQQGT-RWFEARVCAVPDRE 312 Query: 236 AHLQNLVMTFSDITEERQIR 255 +V DI+E R Sbjct: 313 Q----VVWVSWDISERRAAE 328 >UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31M30_SYNE7 Length = 917 Score = 767 bits (1983), Expect = 0.0, Method: Composition-based stats. Identities = 189/772 (24%), Positives = 340/772 (44%), Gaps = 61/772 (7%) Query: 53 IGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQL-----EKKDGSKIWTRFAL 107 IG ++ H + + + L Sbjct: 166 IGRSLHEPFTLTSFLQHCHSSLESLQANAISLGNQRSHYLWDFPVKTAHSDRWFECHCLL 225 Query: 108 SKVSAEGKVYYLALVRDASVEMAQ----KEQTRQLIIAVDHLDRPVIVLDPERHIVQCNR 163 + + +RD + E ++ + + ++ ++VLD + ++ N Sbjct: 226 HHDETGELLSLVGNIRDITEEHHILSLVQDSETRFQVLIESNPNGILVLDEQGAVLFANH 285 Query: 164 AFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIW 223 ++F +SE G L T + L+ G + Sbjct: 286 VAEQVFDQSLSELQGKYLGLPL-------------------TLNVTVQLDLVQPDGSLRY 326 Query: 224 IKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMG------EI 277 ++ SI P+ + + +DIT +Q +Q + A +SP + E Sbjct: 327 VEVSIVPI--PWQQSKAYLALLTDITSLQQTQQRLKLLQEATENSPASILITSAEGIIEY 384 Query: 278 ICRNIESVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAP 330 + E + + L++G+ I ++W + R++ G Sbjct: 385 VNPAFELMTGYGADEVIGKNPRFLKSGLMSPSFYQDLWETITAGETWRGELYNRRKTGEL 444 Query: 331 AG---ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNR 387 + + F+ DI+ EQ+++R+ ++ +D +T LPNR Sbjct: 445 FWDRTSISPVKDLAGQIIHFVAVKEDIT--------EQKRNRELLDHQANYDSLTDLPNR 496 Query: 388 NNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKP 443 + + L + +V L+ +D +++ D+LG+++ D L E+ R R L Sbjct: 497 SLALDRLRQATALSERSNDTVIVMLLDLDRFKNINDTLGHSYGDCLLQEIAKRLRYHLPR 556 Query: 444 DQYLCRIEGTQFVLVSLENDVS-NITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD-- 500 + + R+ G +F+++ + ++ +++ +L ++S+PI I+ + +T SIG++ Sbjct: 557 EITISRLGGDEFLIICPAVKENIHLEKLSQQLLKIISQPITIEAEELVITASIGVACYPN 616 Query: 501 LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLV 560 G + L+ A AM ++NGGN +Q F P MN R+ L L+ A+ QLK+ Sbjct: 617 DGVTPEVLMRNADTAMYSAKRNGGNDFQLFMPTMNAEAHARIQLETHLRHALEQYQLKVF 676 Query: 561 YQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLA 620 YQP I + + G+EALARWHDP G++PP RFIP+AEE G I +G VI +AC+ +A Sbjct: 677 YQPIISLQDNHVVGLEALARWHDPELGNIPPDRFIPIAEETGLIIPLGYRVIEQACQDVA 736 Query: 621 EWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEI 680 W+ + + ++VNLS RSN+ + + + L +E+TE M++++ + I Sbjct: 737 IWQQKYNYPFWVAVNLSPRQLRSNRFTQITAKILQRHNFRPNYLKLEVTEQMLLDNTSTI 796 Query: 681 FKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAI 740 + + L G+ L++DDFGTG+S LS L P +K+D+SF+ AL++ I Sbjct: 797 AQMLDTLHRKGIALALDDFGTGYSALSYLRRYPFQSLKVDQSFLRDIPHSTESCALVKTI 856 Query: 741 TSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 ++ L + VAEGVET EQ E L+ I C QGY+FSRPLPA EI +++ Sbjct: 857 VAMAHGLGMQAVAEGVETAEQVEFLKAIGCEYGQGYWFSRPLPAVEIDSFLA 908 Score = 182 bits (462), Expect = 6e-44, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 102/255 (40%), Gaps = 23/255 (9%) Query: 8 NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP 67 ++ F +E N G ++++E V+F N AE+++ E+ G + Sbjct: 254 QDSETRFQVLIESNPNGILVLDEQGAVLFANHVAEQVFDQSLSELQGKYL---------- 303 Query: 68 AHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASV 127 G ++ +L L + DGS + ++ + + YLAL+ D + Sbjct: 304 ------------GLPLTLNVTVQLDLVQPDGSLRYVEVSIVPIPWQQSKAYLALLTDITS 351 Query: 128 EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI 187 +++ + L A ++ +++ E I N AF M GY E G P L Sbjct: 352 LQQTQQRLKLLQEATENSPASILITSAEGIIEYVNPAFELMTGYGADEVIGKNP-RFLKS 410 Query: 188 PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSD 247 L + + + E +TGE W + SISPV D+ + + V D Sbjct: 411 GLMSPSFYQDLWETITAGETWRGELYNRRKTGELFWDRTSISPVKDLAGQIIHFVAVKED 470 Query: 248 ITEERQIRQLEGNIL 262 ITE+++ R+L + Sbjct: 471 ITEQKRNRELLDHQA 485 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 64/171 (37%), Gaps = 13/171 (7%) Query: 3 LTD--ADNAADGIF---FPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNI 57 LTD + A E + ++ + + + NPA E + GY +EVIG N Sbjct: 346 LTDITSLQQTQQRLKLLQEATENSPASILITSAEGIIEYVNPAFELMTGYGADEVIGKNP 405 Query: 58 DMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA--EGK 115 L + P+ + + G E EL +K G W R ++S V Sbjct: 406 RFLKSGLMSPSFYQDLWETITAG----ETWRGELYNRRKTGELFWDRTSISPVKDLAGQI 461 Query: 116 VYYLALVRDASVEMAQKEQT--RQLIIAVDHLDRPVIVLDPERHIVQCNRA 164 ++++A+ D + + +E + ++ L + LD R + Sbjct: 462 IHFVAVKEDITEQKRNRELLDHQANYDSLTDLPNRSLALDRLRQATALSER 512 >UniRef50_A1S8A3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S8A3_SHEAM Length = 751 Score = 767 bits (1981), Expect = 0.0, Method: Composition-based stats. Identities = 184/679 (27%), Positives = 306/679 (45%), Gaps = 32/679 (4%) Query: 137 QLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRI 196 L +D D + + D E N++ + ++ + + Sbjct: 80 LLQSFMDAFDEHIWIKDAEGRYRFINQSTLVSWDLSPAQILSRKDAEVF-PDRVSEYTDT 138 Query: 197 RLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQ 256 L+ + E + + IW++ +P+YD+ L ++ T DI + + Sbjct: 139 DLKAVKEGHPIVVAECIDRSLDKGNIWLETIKAPMYDMDGRLLGVIGTTRDIARYKAAEE 198 Query: 257 LEGNILAAMCSSPPFHEMGE------IICRNIESVLNESHVSLFA-----LRNGMPIHWA 305 ++ + + I E++ S + L +G Sbjct: 199 QLFLTSKVFENAIEGVMITDSNGIITEINGAFETITGYSRDEVIGKTPKLLNSGRHERDF 258 Query: 306 SSSHGAEIQNAQSWSATI--RQRDGAPAGI---LQIKTSSGAETSAFIERVADISQHMAA 360 + ++ W I R+++G + + F+ +DIS Sbjct: 259 FENLWRALKTQGHWHGEIWNRRKNGTLFAEQTSISAVYGEDGQVRCFVAVFSDISL---- 314 Query: 361 LALEQEKSRQHIEQLIQFDPMTGLPNRNNL----HNYLDDLVDKAVSPVVYLIGVDHIQD 416 +++ + QL DP+T LPNR+ L + ++ + LI VD + Sbjct: 315 ----LKQTEAEVAQLAWHDPLTRLPNRSKLTTISQQQIKLAANRKTRLALLLIDVDLFKH 370 Query: 417 VIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRN 476 + DS G+ D+ LL + R L + L RI G +FVL++ +I I ++ Sbjct: 371 INDSFGHLAGDKVLLSLSERLAALLGAEDTLARIGGDEFVLLTQVRRRDDIPVILSAIQR 430 Query: 477 VVSKPIMI-DDKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPA 533 + + L+ SIGI+ D G N D LL A AM ++ G N F++ Sbjct: 431 AFDTSFDTSEGESVRLSASIGIAVYPDDGDNPDTLLKNADAAMYRAKQQGRNRHAFYTEQ 490 Query: 534 MNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSR 593 M + ++L L AL+ A+ N+ L LVYQP+I T +L G+EAL RW D G V P+ Sbjct: 491 MTQSSMQQLRLQTALRGAVKNSALSLVYQPKINLRTRKLIGVEALCRWTDHELGVVSPAE 550 Query: 594 FIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDA 653 FIP+AE IG + IG WV+ EACRQ WR Q ++ ++VN+S + + V+ Sbjct: 551 FIPVAESIGLMPEIGLWVLKEACRQARIWRDQGLNPGRMAVNVSGSQLTGDNFADSVARV 610 Query: 654 MHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLP 713 + G+ L +EITES+++++ + LR MGV L++DDFGTG+S LS L LP Sbjct: 611 LTQTGLSPDALELEITESVVLDNPASAIDTMDKLRGMGVSLALDDFGTGYSSLSYLRKLP 670 Query: 714 VTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVI 773 + ++KID+SFV T++ A+ AI ++G++L L V+AEGVE + Q E L ++ C Sbjct: 671 LNKLKIDQSFVRELPTDQDSGAIAMAIIAMGEALKLGVIAEGVENETQAEFLLRLGCTEA 730 Query: 774 QGYFFSRPLPAEEIPGWMS 792 QGY F+RPL A E+ + Sbjct: 731 QGYLFARPLLASELKQLLQ 749 Score = 165 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 81/255 (31%), Gaps = 7/255 (2%) Query: 12 GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPE 71 G+ ++ + + F N + W +++ + P + Sbjct: 79 GLLQSFMDAFDEHIWIKDAEGRYRFINQSTLVSWDLSPAQILSRKDAEVFPDRVSEYTDT 138 Query: 72 YIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRDASVEM 129 ++ +EG V E D IW + + + + RD + Sbjct: 139 DLKAVKEGHPIVVA----ECIDRSLDKGNIWLETIKAPMYDMDGRLLGVIGTTRDIARYK 194 Query: 130 AQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE 189 A +EQ ++ V++ D I + N AF + GY E G P LLN Sbjct: 195 AAEEQLFLTSKVFENAIEGVMITDSNGIITEINGAFETITGYSRDEVIGKTP-KLLNSGR 253 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDIT 249 D L + L E + G + SIS VY ++ V FSDI+ Sbjct: 254 HERDFFENLWRALKTQGHWHGEIWNRRKNGTLFAEQTSISAVYGEDGQVRCFVAVFSDIS 313 Query: 250 EERQIRQLEGNILAA 264 +Q + Sbjct: 314 LLKQTEAEVAQLAWH 328 >UniRef50_P72843 Regulatory components of sensory transduction system n=1 Tax=Synechocystis sp. PCC 6803 RepID=P72843_SYNY3 Length = 840 Score = 767 bits (1981), Expect = 0.0, Method: Composition-based stats. Identities = 170/706 (24%), Positives = 317/706 (44%), Gaps = 40/706 (5%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPE-RHIVQCNRAFTEMFGYCISEASGM 179 + + A + A + +A + P+ + I+ N+ F + FG E G+ Sbjct: 144 IEKTARTQAALMQSEINFAVAFNQSPDPIFIYGRNSGCIMDVNQPFCQFFGLTKQELVGV 203 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTAR----DQDEFLLLTRTGEKIWIKASISPVYDVL 235 + LLW+ + E + + + + S P+ Sbjct: 204 SRQQFYFWVDEQQRQSFLRDLLLWQKDGLVKFENREIEVYDQEKQVRTMLLSGEPM--EF 261 Query: 236 AHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNES 289 + L+ DITE R+ + + A SP + ++ + E + Sbjct: 262 NRVDCLLFVMRDITERRKAEKQLKILSQACEQSPASIVITDVQGNITYVNPKFEEISGYK 321 Query: 290 HVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGI---LQIKTS 339 + L++G + + ++W R+++G + ++ Sbjct: 322 SAEVLGRNPRILKSGNKTQEDYELMWKTLASGRNWHGEFHNRRKNGELYWERASISPISN 381 Query: 340 SGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD 399 + ++ DI++ ++ + + +D +TGLPNR + L ++ Sbjct: 382 QQGIVTHYVAVKEDITKE--------KQQAEALFHQAHYDHLTGLPNRILAKDRLQQAIE 433 Query: 400 KAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF 455 A+ + + +D+ + V D+LG+ DQ L+EV R + L+ + R+ G +F Sbjct: 434 SALRQKHIFGLMFLDLDNFKKVNDTLGHDAGDQLLVEVSERLQRALRQTDTVARLGGDEF 493 Query: 456 VLVSLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTA 512 +++ + + + IA L V+ +P+ + F + SIGI+ G + D LL A Sbjct: 494 LIILDQVSHSRKLMAIAQRLLRVMRQPVNLQGLEFFVHGSIGITVFPDDGFHADVLLRNA 553 Query: 513 HNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGEL 572 AM + G N ++FF+P MN+ ++R+ + + L++ +S + +++YQP + E+G++ Sbjct: 554 DTAMYAAKLAGRNMFRFFTPHMNQAAQQRMAIESELRQGLSRQEFQILYQPIVSLESGQI 613 Query: 573 YGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ-NIHIPA 631 G EAL RWH+ L G VPP +FIP+AEE+G I +G W++ C Q A W S Sbjct: 614 VGAEALMRWHNRLLGTVPPDQFIPIAEEVGLIVELGEWLLDNVCCQAAHWHSALGEQTFW 673 Query: 632 LSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMG 691 +SVN+S + + + + + + L +EITE++++E + ++ K + L + Sbjct: 674 VSVNVSPRQLKDSYFVAILQGFLQRYQVRPEWLELEITENLILEENGDLLKNLSDLEEEN 733 Query: 692 VGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTV 751 + LS+DDFGTG+S L+ L +KID+SFV+ + + L+ AI ++ L L V Sbjct: 734 IALSLDDFGTGYSSLNYLRKFNFNSLKIDRSFVELLPHDNNTVGLVRAIIAMAHHLELKV 793 Query: 752 VAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPL 797 +AEG+ET EQ+ LR C QGY FS + EE + P Sbjct: 794 IAEGIETPEQWNFLRLQGCDYGQGYLFSPAIAVEEWES-LGQKPPF 838 Score = 181 bits (461), Expect = 8e-44, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 104/266 (39%), Gaps = 7/266 (2%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINEN-DEVMFFNPAAEKLWGYKREEVIG---NNI 57 + A ++ F A Q+ + N +M N + +G ++E++G Sbjct: 149 RTQAALMQSEINFAVAFNQSPDPIFIYGRNSGCIMDVNQPFCQFFGLTKQELVGVSRQQF 208 Query: 58 DMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVY 117 + R + + ++ G + E +RE+++ ++ + + Sbjct: 209 YFWVDEQQRQSFLRDLLLWQKDGLVKFE--NREIEVYDQEKQVRTMLLSGEPMEFNRVDC 266 Query: 118 YLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 L ++RD + ++Q + L A + +++ D + +I N F E+ GY +E Sbjct: 267 LLFVMRDITERRKAEKQLKILSQACEQSPASIVITDVQGNITYVNPKFEEISGYKSAEVL 326 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 G P +L ++ + + L EF + GE W +ASISP+ + Sbjct: 327 GRNP-RILKSGNKTQEDYELMWKTLASGRNWHGEFHNRRKNGELYWERASISPISNQQGI 385 Query: 238 LQNLVMTFSDITEERQIRQLEGNILA 263 + + V DIT+E+Q + + Sbjct: 386 VTHYVAVKEDITKEKQQAEALFHQAH 411 >UniRef50_A8VRH4 Putative uncharacterized protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRH4_9BACI Length = 815 Score = 766 bits (1980), Expect = 0.0, Method: Composition-based stats. Identities = 199/822 (24%), Positives = 332/822 (40%), Gaps = 53/822 (6%) Query: 10 ADGIFFPALEQNMMGAVLINEN-----DEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 + L + N +F N AA G+ +E ++ N L+ Sbjct: 9 SKTQLNTVLNMISDPVFITEINKSFEPLTFIFVNDAATSHVGWPKEVLLTMNPYDLVDPG 68 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV---SAEGKVYYLAL 121 + E + ++ + E KDG+KI S V GK + L++ Sbjct: 69 YHGTYTEELIRLQD-----HSTLLLESVHRTKDGTKIPVEINSSLVTLTDEHGKSFILSV 123 Query: 122 VRDASVEMAQKEQTRQLIIAVDHL----DRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 VRD S + + + + L + DP + N A + Y E Sbjct: 124 VRDLSGRSSNQMLHERTSKEFESLYLHNPDLIFSTDPLGNFTNMNPACSATLEYSKQELM 183 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 + D +L++ + L K + T++G + + + P+ Sbjct: 184 KLPYDEILDVAHINKTVDQFSKAL--KGQTVTFTATVRTKSGRPVDLNITSLPILVED-Q 240 Query: 238 LQNLVMTFSDITEERQIR----QLEGNILAAMCSSPPFHEMGEIIC------RNIESVLN 287 ++ ++ DIT + + E + + E + Sbjct: 241 VEGVISIARDITAQNITENLLIESEQRYKSIFQYNVDAVTTLNTAGELYYSNPAAEQLFG 300 Query: 288 ESHVSLF-----ALRNGMPIHWASSSHGAEIQNAQS-WSATIRQRDGAPAGI--LQIKTS 339 L + ++ I G + I T Sbjct: 301 CDRSELIKEPFSSFIIAEEREPFHEKMTMTLEGTPHQHETAITNTRGEKRYVHLTLIPTF 360 Query: 340 SGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD 399 E + DI+ E ++S + I L D +T LPN+ L+ L+ Sbjct: 361 INKEVTGVHCIAKDIT--------ESKQSEEKISFLAYHDTLTTLPNQYKFQQDLNTLIA 412 Query: 400 KA----VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF 455 ++ ++ I +D + + D LGY ++ L +V R E L D L R G +F Sbjct: 413 RSSIKPKPFSIFTIDLDRFKFINDYLGYDLGNELLTKVGTRISELLSEDAKLYRYGGDEF 472 Query: 456 VLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGIS--YDLGKNRDYLLSTAH 513 ++ L+ Q+ +++ + +S I +T+SIGIS D GK+ + L+ + Sbjct: 473 TIIHLDATPEESLQLGNKIASAISMAFDISGFDAFITVSIGISHHPDHGKDLNTLIKKSD 532 Query: 514 NAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELY 573 NAM + +K G N Q F+ +N + + L L + L +A+ ++ L YQPQ A+T + Sbjct: 533 NAMYFAKKMGRNNVQMFNEEINTLSTKNLKLESLLYKALERDEFLLHYQPQYDAKTNRIS 592 Query: 574 GIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALS 633 G+EAL RW + G + P+ FIPLAEE G I IG WV+ AC Q W+ + + +S Sbjct: 593 GVEALIRWDNEELGMISPADFIPLAEETGLIVPIGEWVMRTACHQNKAWQDEGLPPMVMS 652 Query: 634 VNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVG 693 VNLS F LP + + G+ L +EITESM M ++ L+ +GV Sbjct: 653 VNLSIRQFYQPDLPQVIGKILEESGMAPELLELEITESMAMH-ADSAISILKQLKQLGVR 711 Query: 694 LSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVA 753 +++DDFGTGFS L+ L P+ +KID+SFVD +++ I + +LNL VVA Sbjct: 712 IAIDDFGTGFSSLNHLKKFPLDHLKIDRSFVDDICLGSEEQDIVKTIIMLAHNLNLRVVA 771 Query: 754 EGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 EGVE Q + L+ C V QG+ FS+P+ + IP + Sbjct: 772 EGVENDLQQQFLKDHRCDVFQGFHFSKPVIRDAIPELLRKQT 813 Score = 78.1 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 68/216 (31%), Gaps = 40/216 (18%) Query: 3 LTDADN-AADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 +T+ ++ + + N+ +N E+ + NPAAE+L+G R E+I I Sbjct: 256 ITENLLIESEQRYKSIFQYNVDAVTTLNTAGELYYSNPAAEQLFGCDRSELIKEPFSSFI 315 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV-YYLA 120 + R E + EG + E + G K + L +V Sbjct: 316 IAEEREPFHEKMTMTLEGTPHQHETAITNTR-----GEKRYVHLTLIPTFINKEVTGVHC 370 Query: 121 LVRDASVEMAQKEQ-------------------TRQLIIAVDHL-----DRPVIVLDPER 156 + +D + +E+ + L + + +D + Sbjct: 371 IAKDITESKQSEEKISFLAYHDTLTTLPNQYKFQQDLNTLIARSSIKPKPFSIFTIDLD- 429 Query: 157 HIVQCNRAFTEMFGYCIS-EAS---GMQPDTLLNIP 188 N + GY + E G + LL+ Sbjct: 430 RFKFIN----DYLGYDLGNELLTKVGTRISELLSED 461 >UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZE4_9PROT Length = 727 Score = 766 bits (1978), Expect = 0.0, Method: Composition-based stats. Identities = 158/565 (27%), Positives = 260/565 (46%), Gaps = 35/565 (6%) Query: 254 IRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSH---- 309 R L + + S + I + + ++ P AS H Sbjct: 170 QRDLLETVFESSYSGVMITDAKGNIVEVNPAFTRITGYQSEEVQGRNPHLLASGRHDHTF 229 Query: 310 ----GAEIQNAQSWSATI--RQRDGAPAGILQ---IKTSSGAETSAFIERVADISQHMAA 360 +I W I R+++G ++ +D+++ Sbjct: 230 YREMWDDILANGHWEGEIWDRRKNGEVYPSWMNINPVRDISGNLLYYVGIFSDVTK---- 285 Query: 361 LALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLV----DKAVSPVVYLIGVDHIQD 416 ++++ I QL +DP+T LPNR L+ L V + +D+ + Sbjct: 286 ----RKEAEAQIHQLAFYDPLTELPNRRLLNERLQQAFSVGARSGHHGAVLFLDLDNFKT 341 Query: 417 VIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVS------LENDVSNITQI 470 + D+ G+ DQ L+EV R ++ + R+ G +FV+V + + + Sbjct: 342 LNDTKGHDIGDQLLIEVAKRLNSCVRNGDTVARLGGDEFVVVLESLSSVPDEAATQADLV 401 Query: 471 ADELRNVVSKPIMIDDKPFPLTLSIGISYDLG--KNRDYLLSTAHNAMDYIRKNGGNGWQ 528 A+++R +S+P + + T SIG+ G ++ + +L A AM + G N + Sbjct: 402 AEKIRYALSQPYQLANHVHRTTPSIGVVMFRGHQQSLEEVLKFADTAMYQAKTAGRNAIR 461 Query: 529 FFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGH 588 F+ P M ++ R L L++ + NQL+L YQ Q+ + G E L RW P G Sbjct: 462 FYDPVMQASIEARAELEEELRQVVERNQLRLYYQVQMD-SSNRPLGAEVLLRWQHPERGL 520 Query: 589 VPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIH-IPALSVNLSALHFRSNQLP 647 V P++FIP+AEE G I IG WV+ AC QL W+S + L+VN+SA FRS Sbjct: 521 VSPAQFIPMAEETGHIVPIGLWVLQTACTQLKVWQSDPLTCDLTLAVNVSAKQFRSMDFV 580 Query: 648 NQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLS 707 +QV + G L +E+TES+++E+ + +++ L+ +GV S+DDFGTG+S L Sbjct: 581 SQVQRTLAQSGAKPSLLKLELTESLVLENVEDTIAKMRELKLLGVSFSMDDFGTGYSSLQ 640 Query: 708 RLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRK 767 L LP+ +IKID+SFV ++ A+++ I ++ + L L V+AEGVET+ Q E L Sbjct: 641 YLKRLPLDQIKIDQSFVRDIASDSNDAAIVQTIIAMSEVLGLNVIAEGVETEAQREFLDL 700 Query: 768 IHCRVIQGYFFSRPLPAEEIPGWMS 792 C QGY F RP P E + Sbjct: 701 RGCHAFQGYLFGRPAPLAEFEAILR 725 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 57/162 (35%), Gaps = 1/162 (0%) Query: 99 SKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHI 158 + + L V A + + +Q L + V++ D + +I Sbjct: 135 TSLPLTTMLQPVLAHLAKAIVLCRNNDVHTRGLIDQRDLLETVFESSYSGVMITDAKGNI 194 Query: 159 VQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRT 218 V+ N AFT + GY E G P LL + + + E + Sbjct: 195 VEVNPAFTRITGYQSEEVQGRNPH-LLASGRHDHTFYREMWDDILANGHWEGEIWDRRKN 253 Query: 219 GEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGN 260 GE +I+PV D+ +L V FSD+T+ ++ Sbjct: 254 GEVYPSWMNINPVRDISGNLLYYVGIFSDVTKRKEAEAQIHQ 295 Score = 112 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 47/137 (34%), Gaps = 6/137 (4%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 T + E + G ++ + ++ NPA ++ GY+ EEV G N +L Sbjct: 164 TRGLIDQRDLLETVFESSYSGVMITDAKGNIVEVNPAFTRITGYQSEEVQGRNPHLLASG 223 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA--EGKVYYLAL 121 H E+ +K+G + ++ V +YY+ + Sbjct: 224 R----HDHTFYREMWDDILANGHWEGEIWDRRKNGEVYPSWMNINPVRDISGNLLYYVGI 279 Query: 122 VRDASVEMAQKEQTRQL 138 D + + Q QL Sbjct: 280 FSDVTKRKEAEAQIHQL 296 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 766 bits (1978), Expect = 0.0, Method: Composition-based stats. Identities = 187/696 (26%), Positives = 310/696 (44%), Gaps = 54/696 (7%) Query: 126 SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 + + DH V++LD + N A + G ++ G + LL Sbjct: 389 EELGERSRDLQLSRFMTDHASDVVLLLDEDGAPRYLNAAAAALLGDDPAQ-RGPRLAALL 447 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 + P E +L + + + S++ + ++L Sbjct: 448 PPSDQPL--------------PLTYETVL-----DDVPFEVSLTSMQYQDHAYRSLRA-- 486 Query: 246 SDITEERQIRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNESHVSLFA---- 295 D++ +Q Q + +S + + ++ R + S Sbjct: 487 RDMSRRQQAEQQQRLAAKIFDTSSQAIVISDASNHIVMVNRAFTDITGYSAQEAIGRQPS 546 Query: 296 -LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGIL---QIKTSSGAETSAFIE 349 L +G ++ W+ I R++DG + + S + Sbjct: 547 LLSSGRQPPAFYQKMWQQLAQRGHWAGEIWNRRKDGTIYPEWLSISLLRDEAGQVSHHVA 606 Query: 350 RVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA----VSPV 405 +DIS E+++ HI + + D +T LPNR +H+ L + A Sbjct: 607 LFSDIS--------ERKEQEAHIRHMAEHDFLTDLPNRALIHDRLAQAIRAAARQKNRLA 658 Query: 406 VYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDV 464 V + +DH +++ D+LG+A D+ L +V R + ++ + R G +FVL+ E Sbjct: 659 VLFLDLDHFKNINDTLGHAHGDELLKQVAQRLQHTVRGSDTVGRNGGDEFVLIVPELASP 718 Query: 465 SNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKN 522 + Q+A L + + +P ID + ++ SIGIS G LL +A AM + + Sbjct: 719 AEAAQLAQRLLDDLRRPFQIDGQALAISTSIGISLFPDNGSELQELLVSADLAMYHAKAQ 778 Query: 523 GGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWH 582 G N +QFF+P +N V ERL L L++A+ QL LVYQPQ + L G EAL RW Sbjct: 779 GRNRYQFFTPELNAQVAERLTLENHLRQALERQQLYLVYQPQFAIDNRRLVGCEALLRWQ 838 Query: 583 DPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFR 642 P G + P+RFIPLAEE G I IGRWV+ EACRQ A W + ++VN+SA Sbjct: 839 HPEQGLISPARFIPLAEETGLIVEIGRWVLDEACRQAAAWLAAG-TPLRVAVNVSARQLG 897 Query: 643 SNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTG 702 L +V A+ + L +E+TES +ME + + +Q ++ G+ L+VDDFGTG Sbjct: 898 QPDLLAEVEAALARHRLPSCWLELEVTESTLMEDAEQAVRHLQAFKERGIHLAVDDFGTG 957 Query: 703 FSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQF 762 +S L+ L IKID++FV + A++ AI + ++L + +AEGVE++EQ Sbjct: 958 YSSLTYLKRFSPDLIKIDRAFVMNLPDNRDDAAIVSAIVQLAEALGMQTLAEGVESEEQL 1017 Query: 763 EMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLK 798 + L + C V+QGY RP A E+ ++ ++ Sbjct: 1018 DFLAQAGCDVVQGYLTGRPQSAGELTAQLAGANSVE 1053 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 94/258 (36%), Gaps = 25/258 (9%) Query: 8 NAADGIFFPAL-EQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLR 66 + D + + +L++E+ + N AA L G + G + L+P + Sbjct: 394 RSRDLQLSRFMTDHASDVVLLLDEDGAPRYLNAAAAALLGDDPAQ-RGPRLAALLPPSDQ 452 Query: 67 PAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDAS 126 P + + D + +L+ + + Y RD S Sbjct: 453 P-------------------LPLTYETVLDD---VPFEVSLTSMQYQDHAYRSLRARDMS 490 Query: 127 VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 ++Q R D + +++ D HIV NRAFT++ GY EA G QP LL+ Sbjct: 491 RRQQAEQQQRLAAKIFDTSSQAIVISDASNHIVMVNRAFTDITGYSAQEAIGRQPS-LLS 549 Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 P ++ Q L + E + G SIS + D + + V FS Sbjct: 550 SGRQPPAFYQKMWQQLAQRGHWAGEIWNRRKDGTIYPEWLSISLLRDEAGQVSHHVALFS 609 Query: 247 DITEERQIRQLEGNILAA 264 DI+E ++ ++ Sbjct: 610 DISERKEQEAHIRHMAEH 627 >UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3JAR2_NITOC Length = 944 Score = 766 bits (1978), Expect = 0.0, Method: Composition-based stats. Identities = 157/577 (27%), Positives = 262/577 (45%), Gaps = 35/577 (6%) Query: 241 LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESHVSLF 294 ++ + + + S+ + + + + + + Sbjct: 371 ILDAYHNDQRRKNAESRLRLTAKVFESTVEGVIITDTKAYVVDVNEAFTHITGIARSEIM 430 Query: 295 ALR-------NGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQI---KTSSGA 342 PI + H I++ W + ++++G + +S Sbjct: 431 GRHLSTLQTKQEKPISFQRVRH--AIKSTGQWQGELWSQRKNGEIYPLWVTANAVRNSKE 488 Query: 343 ETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV 402 E + F+ +DI+ ++++ Q + L D +TGLPNR+ + L+ + A Sbjct: 489 EITHFVAIFSDITL--------RKQTEQRLYYLAHHDALTGLPNRSLFLDRLEHAIHHAQ 540 Query: 403 SP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV 458 V I +D + + D+LG+ D L +V R R ++ + + R+ G +F ++ Sbjct: 541 RHHHRIAVLFIDLDRFKFINDTLGHPIGDILLKQVAERMRLNIRAEDTIARLGGDEFTVI 600 Query: 459 SLE-NDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNA 515 D S I+ I ++ + KP I ++ SIG+S G LL A A Sbjct: 601 IENFTDTSAISLITQKIISACEKPFNIKGNELFVSASIGVSLYPEDGHEASMLLQRADAA 660 Query: 516 MDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGI 575 M +K G + QFF+ +N E+L L L+ A++ + +L YQP I E+G + + Sbjct: 661 MYQAKKRGKSCCQFFTTEINTAATEQLALKNLLRRALARKEFQLYYQPIINMESGAIVSV 720 Query: 576 EALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVN 635 EAL RW DP G + P+ FIPLAEE G I +G WV+ AC Q W N + +++N Sbjct: 721 EALIRWVDPELGLISPNTFIPLAEENGLILPLGEWVLQTACTQAKIWNQSNPYPVRIAIN 780 Query: 636 LSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLS 695 LSA +VS+ + L +E+TESM++ K + L+ MG LS Sbjct: 781 LSARQLEQTDFSERVSEILKKTPFPTDHLELELTESMLINRMESSLKTLNTLKKMGCRLS 840 Query: 696 VDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEG 755 +DDFGTG+S L+ L P+ +KID+SFV + A+ A+T++ SL V+A+G Sbjct: 841 LDDFGTGYSPLAYLKRFPIDTVKIDRSFVQGISIDPDDAAITTAVTTMAHSLKRAVIAKG 900 Query: 756 VETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 VET+EQ L +I QGYF S P+PAEE+ + Sbjct: 901 VETREQLNFLNEIKVDEAQGYFISYPVPAEELTQKLR 937 Score = 108 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 32/136 (23%), Positives = 53/136 (38%), Gaps = 1/136 (0%) Query: 123 RDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPD 182 + + + R + VI+ D + ++V N AFT + G SE G Sbjct: 376 HNDQRRKNAESRLRLTAKVFESTVEGVIITDTKAYVVDVNEAFTHITGIARSEIMGRHLS 435 Query: 183 TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 TL E P R++ + T + Q E + GE + + + V + + + V Sbjct: 436 TLQTKQEKPISF-QRVRHAIKSTGQWQGELWSQRKNGEIYPLWVTANAVRNSKEEITHFV 494 Query: 243 MTFSDITEERQIRQLE 258 FSDIT +Q Q Sbjct: 495 AIFSDITLRKQTEQRL 510 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 74/218 (33%), Gaps = 28/218 (12%) Query: 5 DADNAADGIFFP---ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 A+ E + G ++ + V+ N A + G R E++G ++ L Sbjct: 379 QRRKNAESRLRLTAKVFESTVEGVIITDTKAYVVDVNEAFTHITGIARSEIMGRHLSTLQ 438 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA--EGKVYYL 119 + +P + +RH + EL ++K+G + V E +++ Sbjct: 439 TKQEKPISFQRVRHAIKS----TGQWQGELWSQRKNGEIYPLWVTANAVRNSKEEITHFV 494 Query: 120 ALVRDASVEMAQKEQTRQL--IIAVDHLDRPVIVLDPERHIVQCNRA--------FTEM- 168 A+ D ++ +++ L A+ L + LD H + + F ++ Sbjct: 495 AIFSDITLRKQTEQRLYYLAHHDALTGLPNRSLFLDRLEHAIHHAQRHHHRIAVLFIDLD 554 Query: 169 --------FGYCISEASGMQPDTLLNIPEFPADNRIRL 198 G+ I + Q + + D RL Sbjct: 555 RFKFINDTLGHPIGDILLKQVAERMRLNIRAEDTIARL 592 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 766 bits (1978), Expect = 0.0, Method: Composition-based stats. Identities = 162/592 (27%), Positives = 269/592 (45%), Gaps = 36/592 (6%) Query: 228 ISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMG---------EII 278 ++ + + + + D + A+ S + E + Sbjct: 317 VALLVSLAQRVTVEIRAHRDRHGRQAAEAALRLRERAIECSANAVIISSAQVPEFAIEYV 376 Query: 279 CRNIESVLNESHVSLFAL-------RNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPA 331 E + + + + +++G+ Sbjct: 377 NPAFERITGYTAAEAIGRSSSFLLRNDHEQAGLYEIRAALAEKREGKAVLRNYRKNGSLF 436 Query: 332 G---ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRN 388 + +T+ F+ ++DI+ ++ + +L D +TGLPNR Sbjct: 437 WNDLYIAPVKDDEGKTTHFVAAMSDITPM--------KQYETTLHRLASHDVLTGLPNRA 488 Query: 389 NLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPD 444 L + L++ + + V L+ +D + V D++G+ D L + +R + ++ Sbjct: 489 LLQDRLENAIAYSARNGHAVWVVLVDLDRFKFVNDTMGHQAGDVLLKIISDRLQASVRES 548 Query: 445 QYLCRIEGTQFVLVSLEND---VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD- 500 + R+ G +FVLV E + + + V KP+ I F L+ S+GI+ Sbjct: 549 DTVARLGGDEFVLVLPECGDGPSGYSSDVIQRIMEAVVKPLTIQGSEFFLSCSMGIAVYP 608 Query: 501 -LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKL 559 G + LL+ A AM ++ G N +QF++PAMN+ ERL + L+ AI N+L L Sbjct: 609 NDGADPTTLLAHADVAMYRSKELGRNNFQFYTPAMNDQALERLRIEGELRHAIELNELVL 668 Query: 560 VYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQL 619 YQPQ+ TG + G+EAL RW+ P+ G V P FI LAEE G I IG WV+ ACRQ Sbjct: 669 HYQPQVDLHTGAIVGLEALVRWNHPILGMVQPGSFISLAEETGLIIPIGAWVLQTACRQA 728 Query: 620 AEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTE 679 W+ ++VNLSA F L + D + G++ L +E+TES +M Sbjct: 729 KAWQDMGFTQLRIAVNLSARQFTQASLLESIKDTLQETGLEARFLEIELTESSVMADIER 788 Query: 680 IFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEA 739 ++ L+ +GV LSVDDFGTG S L+ L P+ +KID+SFV + +++ + Sbjct: 789 NILTLRDLKSLGVQLSVDDFGTGHSSLAYLKRFPIDTLKIDRSFVRDIAINQDDASIVSS 848 Query: 740 ITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 I S+ +L L V+AEGVET Q ++LR C IQGY+F +PLP+++I + Sbjct: 849 IISLAHNLKLNVIAEGVETASQMDILRAQGCNEIQGYYFCKPLPSDQIETLL 900 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 51/149 (34%), Gaps = 4/149 (2%) Query: 119 LALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLD---PERHIVQCNRAFTEMFGYCISE 175 + RD A + R A++ VI+ PE I N AF + GY +E Sbjct: 331 IRAHRDRHGRQAAEAALRLRERAIECSANAVIISSAQVPEFAIEYVNPAFERITGYTAAE 390 Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVL 235 A G LL + ++ L + + + G W I+PV D Sbjct: 391 AIGRSSSFLLR-NDHEQAGLYEIRAALAEKREGKAVLRNYRKNGSLFWNDLYIAPVKDDE 449 Query: 236 AHLQNLVMTFSDITEERQIRQLEGNILAA 264 + V SDIT +Q + + Sbjct: 450 GKTTHFVAAMSDITPMKQYETTLHRLASH 478 Score = 90.0 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 61/168 (36%), Gaps = 14/168 (8%) Query: 7 DNAADGIFF---PALEQNMMGAVLINEN---DEVMFFNPAAEKLWGYKREEVIGNNIDML 60 AA+ A+E + ++ + + + NPA E++ GY E IG + L Sbjct: 340 RQAAEAALRLRERAIECSANAVIISSAQVPEFAIEYVNPAFERITGYTAAEAIGRSSSFL 399 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYY 118 + D A IR + L+ +K+GS W ++ V + ++ Sbjct: 400 LRNDHEQAGLYEIRAALAEKREGKAV----LRNYRKNGSLFWNDLYIAPVKDDEGKTTHF 455 Query: 119 LALVRDASVEMAQKEQTRQL--IIAVDHLDRPVIVLDPERHIVQCNRA 164 +A + D + + +L + L ++ D + + + Sbjct: 456 VAAMSDITPMKQYETTLHRLASHDVLTGLPNRALLQDRLENAIAYSAR 503 Score = 60.8 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 20/169 (11%), Positives = 49/169 (28%), Gaps = 1/169 (0%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLD-PERHIVQCNRAFTEMFGYCISEASGM 179 L+R + ++ D+ V VL P+ ++ ++ ++G Sbjct: 30 LLRRYATRRRAGFLADPATESLLAADKIVWVLRIPDGQVIYASKTVEALYGSSPERFYAN 89 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 L NI + + L + + + G WI+ + D Sbjct: 90 SRLWLENIAPADREPALELLGSILHEPQQTLRLRINRSDGSPRWIEYHARFIPDTDGRSG 149 Query: 240 NLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNE 288 ++ + +DIT + A+ + ++ + Sbjct: 150 HVKLIGTDITTRHHLEIALARSNRALRAIHDCEDVISEAVDENALLQGI 198 Score = 53.8 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 19/148 (12%), Positives = 44/148 (29%), Gaps = 15/148 (10%) Query: 6 ADNAADGIFFPALEQNMMGAVLIN-ENDEVMFFNPAAEKLWGYKREEVIG--NNIDMLIP 62 AD A + + ++ ++ + +V++ + E L+G E I Sbjct: 44 ADPATESLLAA--DKI---VWVLRIPDGQVIYASKTVEALYGSSPERFYANSRLWLENIA 98 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALS--KVSAEGKVYYLA 120 R E G + L++ + DGS W + + + Sbjct: 99 PADREPALE-----LLGSILHEPQQTLRLRINRSDGSPRWIEYHARFIPDTDGRSGHVKL 153 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRP 148 + D + + + A+ + Sbjct: 154 IGTDITTRHHLEIALARSNRALRAIHDC 181 >UniRef50_C6CDP3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dickeya dadantii Ech703 RepID=C6CDP3_DICDC Length = 685 Score = 765 bits (1976), Expect = 0.0, Method: Composition-based stats. Identities = 175/691 (25%), Positives = 301/691 (43%), Gaps = 37/691 (5%) Query: 133 EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPA 192 +D + V+D + + N A+ ++GY E + PE Sbjct: 7 RSDSLFQAILDRCPVGIAVIDYSGNYLTVNPAYCNIYGYTQQEMLHRSFTMVF-PPEAQG 65 Query: 193 DNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER 252 R Q+ L + + E+ + R G + + + P LV DI+E + Sbjct: 66 SVLERHQRFLDEGGKLGGEWTVTRRDGTLLTVWSESVPFAQAGHKADRLVYVL-DISERK 124 Query: 253 QIRQLEGNILAAMC---SSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSH 309 + + + A + + I + + + P + SS H Sbjct: 125 KTHEQQQIAAAVYDASHEAIFVTDADNNIISVNPAFSRLTGYHFDDVNGKNPRMFKSSRH 184 Query: 310 --------GAEIQNAQSWSATI--RQRDGAPAG---ILQIKTSSGAETSAFIERVADISQ 356 + W + R ++G + + + + +DI+ Sbjct: 185 PPSFYAEMWHALHEKGLWIGEVWDRHKNGHDYLKELTVTVIRDAAGHIINHVGMFSDITL 244 Query: 357 HMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVD 412 ++K + I + +D +T LPNR+ + L+ A + LI +D Sbjct: 245 --------RKKQEELIWRQANYDAITDLPNRHLFQSKLEQAAQHARRTGNLMALMLIDLD 296 Query: 413 HIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYL-CRIEGTQFVLVSLEN-DVSNITQI 470 H + V DS+G+ D L V R + ++ + R+ G +F ++ + + + Sbjct: 297 HFKAVNDSMGHRAGDMLLTRVSQRLIDSVQHADTIIARLGGDEFAVIISDLFQPHDCDAL 356 Query: 471 ADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQ 528 A L +S P ID + ++ SIGI+ N + L A AM + G NG+ Sbjct: 357 AKALLENLSHPFNIDGENMFVSASIGIACFPTDSDNLEALFKNADQAMYAAKNAGRNGFS 416 Query: 529 FFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGH 588 ++SPA+++ + RL + L++AI Q ++ YQP + +TG + EAL RWH P HG Sbjct: 417 YYSPALHDAARTRLRMTNDLRKAIREEQFEVYYQPIVALDTGHITKAEALVRWHHPTHGL 476 Query: 589 VPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPN 648 V P+ FIPLAEE G I +G WV +A QLA WR +++NLS + RS + Sbjct: 477 VSPAEFIPLAEETGIIIPLGNWVARQAIAQLARWRQFCDPRFQMTINLSPIQLRSQDFAD 536 Query: 649 Q-VSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLS 707 + G+ G + +EITE +++ + + + + + RD G+ +++DDFGTG+S L+ Sbjct: 537 MDWLRELDRHGLSGDAIAIEITEGLLLNAEPRVNRNLHMFRDAGIQIAIDDFGTGYSSLA 596 Query: 708 RLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRK 767 L + +KID+SF++ + L AI ++ SL L VVAEGVET +Q ML++ Sbjct: 597 YLRRFNIDYLKIDRSFIEDM--DGVGHELCVAIVAMAHSLGLQVVAEGVETLQQSAMLKR 654 Query: 768 IHCRVIQGYFFSRPLPAEEIPGWMSSVLPLK 798 I C QG+ FSRP A +I + + L Sbjct: 655 IGCDYAQGFLFSRPQSAADITQLLPTAPSLP 685 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 50/273 (18%), Positives = 106/273 (38%), Gaps = 13/273 (4%) Query: 9 AADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPA 68 +D +F L++ +G +I+ + + NPA ++GY ++E++ + M+ P + + + Sbjct: 7 RSDSLFQAILDRCPVGIAVIDYSGNYLTVNPAYCNIYGYTQQEMLHRSFTMVFPPEAQGS 66 Query: 69 HPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVY-YLALVRDASV 127 E + + G + E + ++DG+ + + G L V D S Sbjct: 67 VLERHQRFLDEG----GKLGGEWTVTRRDGTLLTVWSESVPFAQAGHKADRLVYVLDISE 122 Query: 128 EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNI 187 EQ + D + V D + +I+ N AF+ + GY + +G P + Sbjct: 123 RKKTHEQQQIAAAVYDASHEAIFVTDADNNIISVNPAFSRLTGYHFDDVNGKNP-RMFKS 181 Query: 188 PEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSD 247 P + L + E + G + +++ + D H+ N V FSD Sbjct: 182 SRHPPSFYAEMWHALHEKGLWIGEVWDRHKNGHDYLKELTVTVIRDAAGHIINHVGMFSD 241 Query: 248 ITEERQIRQLEGNILAAMCSSPPFHEMGEIICR 280 IT ++ + + + + ++ R Sbjct: 242 ITLRKKQEE-------LIWRQANYDAITDLPNR 267 Score = 98.1 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 20/164 (12%), Positives = 53/164 (32%), Gaps = 15/164 (9%) Query: 1 MKLTDAD--NAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNID 58 + +++ + I + + + + ++ ++ NPA +L GY ++V G N Sbjct: 118 LDISERKKTHEQQQIAAAVYDASHEAIFVTDADNNIISVNPAFSRLTGYHFDDVNGKNPR 177 Query: 59 MLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA--EGKV 116 M P+ + H E+ K+G ++ + + Sbjct: 178 MFKSSRHPPSFYAEMWHAL----HEKGLWIGEVWDRHKNGHDYLKELTVTVIRDAAGHII 233 Query: 117 YYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQ 160 ++ + D ++ Q+E + + D + Sbjct: 234 NHVGMFSDITLRKKQEE-------LIWRQANYDAITDLPNRHLF 270 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 765 bits (1976), Expect = 0.0, Method: Composition-based stats. Identities = 158/444 (35%), Positives = 240/444 (54%), Gaps = 8/444 (1%) Query: 356 QHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSP----VVYLIGV 411 + E+ ++ + I Q+ +D +TGLPNR ++ L + A V + + Sbjct: 176 AMLEEEVAERSRAEERIRQMAYYDSLTGLPNRRLFNDRLRQSLALAQRHKRPLAVMFLDL 235 Query: 412 DHIQDVIDSLGYAWADQALLEVVNRFREKLK-PDQYLCRIEGTQFVL-VSLENDVSNITQ 469 D + + D+LG+A D+ L+ V R R + + R G +F++ +S +DV + Sbjct: 236 DRFKLINDTLGHAVGDRLLMAVAKRLRNCCRREGDTVARQGGDEFIINLSAISDVKDAFT 295 Query: 470 IADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGW 527 +A ++ +V P +ID +T SIGIS G++ D L+ A AM ++ G N Sbjct: 296 VAQKIIDVFRTPFVIDGYELFITTSIGISVYPHDGRSGDALVKNADVAMYRAKEQGRNNC 355 Query: 528 QFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHG 587 Q F+P MN ERL L ++ A+ ++ L YQP++ E G++ +EAL RW P G Sbjct: 356 QLFAPEMNARAFERLSLENDMRRALERDEFVLHYQPKVNVEHGQIACMEALVRWQHPSMG 415 Query: 588 HVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLP 647 VPPSRFIPLAEE G I +G WV+ AC+Q W+ ++VNLS R L Sbjct: 416 LVPPSRFIPLAEETGLIVPLGEWVLRTACQQNRAWQDAGYPTMQVAVNLSPRQLRQGDLS 475 Query: 648 NQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLS 707 V+ + G+ L +E+TES++M+ E + + L MGV +S+DDFGTG+S L Sbjct: 476 ETVARVLAETGLAPGWLVIEVTESILMDDAEETIRTFRRLDRMGVRISIDDFGTGYSSLH 535 Query: 708 RLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRK 767 L PV +KID+SFV + A+ A+ S+ + LNL VVAEGVET EQ E+LR Sbjct: 536 YLKKFPVHTLKIDRSFVREIASNPDDEAIAGAVISMAKGLNLGVVAEGVETVEQMEVLRA 595 Query: 768 IHCRVIQGYFFSRPLPAEEIPGWM 791 ++CR +QG+ FS P PAE+ + Sbjct: 596 LNCRYMQGFLFSEPAPAEQFTPVL 619 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 764 bits (1973), Expect = 0.0, Method: Composition-based stats. Identities = 162/561 (28%), Positives = 266/561 (47%), Gaps = 31/561 (5%) Query: 254 IRQLEGNILAAMCSSPPFHEMGE------IICRNIESVLNESHVSLFA-----LRNGMPI 302 + ++ + + + + E++ S+ L++G Sbjct: 154 AERQLMLTAKVFENTTEGIVVTDSTACITNVNPSFEAITGYDRGSVLGQNISILQSGRHD 213 Query: 303 HWASSSHGAEIQNAQSWSATI--RQRDGAPAGIL---QIKTSSGAETSAFIERVADISQH 357 + A W + R+++G + +T +++ D+++ Sbjct: 214 RRFYGKMWQTLLTAGKWQGEVWNRRKNGEIYPQWVNISAIRTGDGQTESYVGVFTDLTRI 273 Query: 358 MAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDH 413 ++S +++ L D +T LPNR H+ L+ + ++ V ++ +D Sbjct: 274 --------KESEENLLYLSGHDALTELPNRLLFHDRLNQTLVESADSGSIVAVLIVDLDR 325 Query: 414 IQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIAD 472 + + DS+G+ D L EV R R L R+ G +F +V + +A Sbjct: 326 FKVINDSMGHEVGDSLLCEVATRLRAICPAKATLARLGGDEFGIVLPNMTQNRDAALLAQ 385 Query: 473 ELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFF 530 E+ V++PI I + F + SIG++ G+ L+ A +AM + +++G N +QF+ Sbjct: 386 EVLTRVAQPITISEVEFAVGASIGMTVYPLDGEKPSVLMRNAESAMYHAKQSGRNNFQFY 445 Query: 531 SPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVP 590 +N R++L + L+ A+ + L YQPQ+ TG+L G+EAL RW P G V Sbjct: 446 RSELNTASLARILLESGLRNAVDRQEFLLFYQPQMELATGKLIGMEALIRWQHPEQGMVS 505 Query: 591 PSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQV 650 P FIPLAEE G + +G+W + EACRQ W Q +SVNLS + FR V Sbjct: 506 PGEFIPLAEETGLVIPMGQWALKEACRQSKVWMDQTGVPLRISVNLSGIQFRLPDFTEMV 565 Query: 651 SDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLV 710 + G+ H L +E+TES+ M E +++ IL GV L++DDFGTGFS LS L Sbjct: 566 MRTVGESGLPPHCLELELTESIAMGDVEETLEKLTILSRFGVLLAIDDFGTGFSSLSYLK 625 Query: 711 SLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHC 770 P+ +KID+SFV C + A++ A ++ SLNL V+AEGVE EQ E L + C Sbjct: 626 KFPIDTLKIDQSFVRNCTRDPEDAAIIRAFINLAHSLNLEVIAEGVEHLEQLEFLAQESC 685 Query: 771 RVIQGYFFSRPLPAEEIPGWM 791 IQGYF+ RPL ++ +M Sbjct: 686 DEIQGYFYGRPLSGDKFEMFM 706 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 50/153 (32%), Gaps = 3/153 (1%) Query: 131 QKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEF 190 + Q ++ ++V D I N +F + GY G +L Sbjct: 154 AERQLMLTAKVFENTTEGIVVTDSTACITNVNPSFEAITGYDRGSVLGQNIS-ILQSGRH 212 Query: 191 PADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITE 250 ++ Q L + Q E + GE +IS + ++ V F+D+T Sbjct: 213 DRRFYGKMWQTLLTAGKWQGEVWNRRKNGEIYPQWVNISAIRTGDGQTESYVGVFTDLTR 272 Query: 251 ERQIRQLE--GNILAAMCSSPPFHEMGEIICRN 281 ++ + + A+ P + + + Sbjct: 273 IKESEENLLYLSGHDALTELPNRLLFHDRLNQT 305 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 47/156 (30%), Gaps = 9/156 (5%) Query: 9 AADGIFFP-ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRP 67 + E G V+ + + NP+ E + GY R V+G NI +L Sbjct: 155 ERQLMLTAKVFENTTEGIVVTDSTACITNVNPSFEAITGYDRGSVLGQNISILQSGRHDR 214 Query: 68 AHPEYIRHNREGGKARVEGMSRELQLEKKDGSKI--WTRFALSKVSAEGKVYYLALVRDA 125 + E+ +K+G W + + Y+ + D Sbjct: 215 RFYGKMWQTLLTA----GKWQGEVWNRRKNGEIYPQWVNISAIRTGDGQTESYVGVFTDL 270 Query: 126 SVEMAQKEQTRQL--IIAVDHLDRPVIVLDPERHIV 159 + +E L A+ L ++ D + Sbjct: 271 TRIKESEENLLYLSGHDALTELPNRLLFHDRLNQTL 306 >UniRef50_Q607V4 Sensory box protein/GGDEF domain protein n=1 Tax=Methylococcus capsulatus RepID=Q607V4_METCA Length = 819 Score = 764 bits (1973), Expect = 0.0, Method: Composition-based stats. Identities = 172/701 (24%), Positives = 298/701 (42%), Gaps = 44/701 (6%) Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGY-CISEASGM 179 L + S +++ R +D V + + ++ NRA +M I E G Sbjct: 134 LASEVSERKQAEQRLRM---LIDAEPECVKTVGADGTLLDMNRAGLQMIEAESIEEVRGK 190 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 +L+ + Q + EF ++ G + W+++ P Sbjct: 191 PITSLVAPQDVERF--KAFNQRVLAGESGILEFQIIGLKGGRRWLESHAVPFASRPGAPD 248 Query: 240 NLVMTFSDITEERQIRQLEGNILAAMC--SSPPFHEMGEIICRNIE---SVLNESHVSLF 294 ++ D+TE + + A + + I+ R ++ + + Sbjct: 249 AVLAVTRDVTERKLAEEAVRLAATAFETSEAIMITDAAGIVQRVNSGYSAITGYTSDEIV 308 Query: 295 A------LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQ---IKTSSGAE 343 G + + ++ W + R+++G + + Sbjct: 309 GTPSEFLHPGGEEGKTSPRAILEALKGTDCWKGELTARRKNGDVCPVWLSIKAVRNDEQI 368 Query: 344 TSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA-- 401 + ++ DIS E+++++Q IEQL FDP+TGLPNR L+ + ++ Sbjct: 369 LTHYVVTFVDIS--------ERKRAQQEIEQLAYFDPLTGLPNRRLFLERLNQAIGESCV 420 Query: 402 --VSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVS 459 + + +D + + D+ G+ DQ L +V R E + + R+ G +FV++ Sbjct: 421 NGSRCSLLFVDLDRFKHLNDARGHTVGDQLLRKVAERLSEGVGRGGMVARLGGDEFVILL 480 Query: 460 LENDVS------NITQIADELRNVVSKPIMIDDKPFPLTLSIG--ISYDLGKNRDYLLST 511 D +A+ LR ++ +P ++ +T SIG I + D LL Sbjct: 481 NGLDEEFESACRRTMDVAENLRVILQRPFVLSSGQHYVTASIGTAIYPFDTDSADDLLKA 540 Query: 512 AHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGE 571 A AM + +G N + ++ M + RL L + A+ + +L Q Q+ G Sbjct: 541 ADMAMYEAKASGRNTVRAYASTMQAAAETRLTLERDMHAALERREFRLYLQSQVD-GNGR 599 Query: 572 LYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPA 631 + G EAL RW P G + P +FI LAEE G I IG WV + C + + Sbjct: 600 IVGAEALLRWEHPTEGILLPDKFIALAEETGLILPIGEWVFEQVCHENVRLSQAGHR-LS 658 Query: 632 LSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMG 691 LSVN+S F+ + V + G + H L EITE +++ + ++ L +G Sbjct: 659 LSVNISPRRFQQADFLDHVQRILKRTGANPHDLIFEITEGLLVSDFDDAIAKMSFLERLG 718 Query: 692 VGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTV 751 + SVDDFGTG+S L+ L LP++E+KI ++FV+ + +AL++ I S+ LNL Sbjct: 719 IRFSVDDFGTGYSSLAYLKRLPLSELKIAQTFVNDLPDDPSDVALVQTILSMAYHLNLET 778 Query: 752 VAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 VAEGVET+ Q E L+ C QGY+FS PLPA E ++ Sbjct: 779 VAEGVETRAQLEFLKARGCTRFQGYYFSPPLPATEFFEKLA 819 Score = 155 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 55/308 (17%), Positives = 102/308 (33%), Gaps = 12/308 (3%) Query: 7 DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGY-KREEVIGNNIDMLIPRDL 65 A+ ++ + + ++ N A ++ EEV G I L+ Sbjct: 141 RKQAEQRLRMLIDAEPECVKTVGADGTLLDMNRAGLQMIEAESIEEVRGKPITSLVAPQD 200 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV--SAEGKVYYLALVR 123 + + G E E Q+ G + W LA+ R Sbjct: 201 VERFKAFNQRVLAG-----ESGILEFQIIGLKGGRRWLESHAVPFASRPGAPDAVLAVTR 255 Query: 124 DASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDT 183 D + +E R A + +++ D + + N ++ + GY E G + Sbjct: 256 DVTERKLAEEAVRLAATAFETS-EAIMITDAAGIVQRVNSGYSAITGYTSDEIVGTPSEF 314 Query: 184 LLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVM 243 L E + + + L T + E + G+ + SI V + L + V+ Sbjct: 315 LHPGGEEGKTSPRAILEALKGTDCWKGELTARRKNGDVCPVWLSIKAVRNDEQILTHYVV 374 Query: 244 TFSDITEERQIRQLEGN--ILAAMCSSPPFHEMGEIICRNI-ESVLNESHVSLFALRNGM 300 TF DI+E ++ +Q + P E + + I ES +N S SL + Sbjct: 375 TFVDISERKRAQQEIEQLAYFDPLTGLPNRRLFLERLNQAIGESCVNGSRCSLLFVDLDR 434 Query: 301 PIHWASSS 308 H + Sbjct: 435 FKHLNDAR 442 >UniRef50_C8QI00 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Enterobacteriaceae RepID=C8QI00_9ENTR Length = 949 Score = 764 bits (1973), Expect = 0.0, Method: Composition-based stats. Identities = 204/821 (24%), Positives = 348/821 (42%), Gaps = 64/821 (7%) Query: 14 FFPALEQNMM-GAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEY 72 F +E +++ + V +N A++ GY EE++G + R H Sbjct: 137 FRLLVEGVTDYAIYMLDLDGNVENWNAGAQRAKGYVAEEIVGQHFSRFYSAQDRLNH--- 193 Query: 73 IRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRDASVEMA 130 I G + E +KDGS W + + + + Y + RD + + A Sbjct: 194 IPEKNLGIAFKTGRFEDEGWRYRKDGSAFWAHVIIDAIRDDTGKLIGYAKITRDCTEQQA 253 Query: 131 Q----KEQTRQLIIAVDHLDR-PVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 +EQ + + V + + +LD + +V N GY E G Sbjct: 254 LLRAQREQEKTFRLLVTGVRDYAIYMLDVQGRVVNWNAGAQRAKGYRSEEIVGQHFSVFY 313 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 E + + KT R +DE + G W I +++ L Sbjct: 314 GAQERQSKAPDANLGIALKTGRFEDEGWRYRKDGSAFWAHVVIDAIHNEEGRLIGFAKIT 373 Query: 246 SDITEERQIRQLEGNILAAMCSSPP-------------------------FHEMGEIICR 280 D+TE R+ Q + ++ Sbjct: 374 RDVTERREHEQQLLRARDLAEAQSAKASELSKFLDTIITHIPSCVIVEDAITREILMVND 433 Query: 281 NIESVLNESHVSLFALR-----NGMPIHWASSSHGAEIQNAQSWSAT--IRQRDGA-PAG 332 E + + + + R + + +S +++ + + G Sbjct: 434 KAEQLFGINKLLIMHKRPHECMSAELSDYFNSLADIALRSEGIHTREQLLLTAGGERILH 493 Query: 333 ILQIKTSSGAETSAFIE-RVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLH 391 + F+ V D++ +Q ++ I + D +T LPNR Sbjct: 494 TRATTIAGKDLRQNFVMLIVEDVT--------DQREADARIHHMAHHDNLTSLPNRILFR 545 Query: 392 NYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYL 447 L + + + +D+ ++V D+LG+ D L V R R L+ L Sbjct: 546 QKLSEALRADTQGGYITATLCLDLDNFKNVNDALGHQIGDDLLRTVAKRLRNVLRDHDTL 605 Query: 448 CRIEGTQFVLVSL-ENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDL--GKN 504 RI G +F +V + +A L + P+ ++ + LS+GI+ Sbjct: 606 ARIGGDEFAIVLPNIRNADEAAVVAQRLIEAIRPPVNLEGHNLSVGLSVGIALSSQAANT 665 Query: 505 RDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQ 564 +++L A A+ ++NG N ++ F+ M+++ + R V+ L++AIS QLKL YQP Sbjct: 666 PEHMLRCADMALYEAKRNGRNRYEHFTLEMDDLARSRRVIENDLRDAISGRQLKLYYQPI 725 Query: 565 IFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRS 624 + G EAL RWH P+ G + P+ FIP+AEE G I +G + + EACR+ A W Sbjct: 726 TDGNEKGIIGYEALMRWHHPIKGLIMPNDFIPIAEETGLIHLLGAYALYEACREAASWEG 785 Query: 625 QNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRI 684 + ++SVNLS L F+++ L + V A+ G+ H+L VEITES++++ + + Sbjct: 786 EQ----SVSVNLSPLQFKNSSLISVVEGALRESGLAPHRLEVEITESVLLDDALGNIRTL 841 Query: 685 QILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIG 744 Q L+ +GV +++DDFGTG+S LS L S P +IKIDKSF++ + LA++ AIT + Sbjct: 842 QNLKALGVQIALDDFGTGYSSLSYLRSFPFDKIKIDKSFINDMGDSREALAIIRAITGMS 901 Query: 745 QSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAE 785 +SL++ + AEGVE+ EQF LR+ C + QGY F RP P+E Sbjct: 902 RSLDIQITAEGVESSEQFARLREEGCTLFQGYLFGRPQPSE 942 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 57/396 (14%), Positives = 121/396 (30%), Gaps = 37/396 (9%) Query: 7 DNAADGIFFPALEQNMM-GAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 DN +D ++ ++ + ++ + V +N A++ GY EE++G N + D Sbjct: 2 DNNSDVMYRLLVQSVLDYAIYMLKPDGTVASWNAGAQRAKGYTAEEIVGKNFALFYSEDD 61 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA--EGKVYYLALVR 123 R R E E +KDGS + + + + + R Sbjct: 62 RKNGAPLRGLANATATGRFET---EGWRYRKDGSAFSAHVIIDAIRDQYGELLGFAKITR 118 Query: 124 DASVEMAQKEQTRQLIIAVDHLDRP-----VIVLDPERHIVQCNRAFTEMFGYCISEASG 178 D + + Q+ + R+ L + +LD + ++ N GY E G Sbjct: 119 DCTQQQEQQRRQREQEERFRLLVEGVTDYAIYMLDLDGNVENWNAGAQRAKGYVAEEIVG 178 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 + + + + +KT R +DE + G W I + D L Sbjct: 179 QHFSRFYSAQDRLNHIPEKNLGIAFKTGRFEDEGWRYRKDGSAFWAHVIIDAIRDDTGKL 238 Query: 239 QNLVMTFSDITEERQIRQLEGNILAAMCSSPPF-----HEMGEIICRNIESVL------N 287 D TE++ + + + M ++ R + Sbjct: 239 IGYAKITRDCTEQQALLRAQREQEKTFRLLVTGVRDYAIYMLDVQGRVVNWNAGAQRAKG 298 Query: 288 ESHVSLFALR-------NGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGILQIKT 338 + ++ G ++ + ++DG+ + Sbjct: 299 YRSEEIVGQHFSVFYGAQERQSKAPDANLGIALK-TGRFEDEGWRYRKDGSAFWAHVVID 357 Query: 339 SSGAETSAFIERVADISQHMAALALEQEKSRQHIEQ 374 + E I A I++ E+ + Q + + Sbjct: 358 AIHNEEGRLIG-FAKITR----DVTERREHEQQLLR 388 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 763 bits (1972), Expect = 0.0, Method: Composition-based stats. Identities = 157/583 (26%), Positives = 268/583 (45%), Gaps = 37/583 (6%) Query: 238 LQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFH---------------EMGEIICRNI 282 L ++ + ++ + E + + + ++ Sbjct: 290 LTGYILYAKLLASRKERKDTEKRYRSVISQASDIILLVDIDSRRILEANLAFQRLLNYAP 349 Query: 283 ESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSAT--IRQRDGAPAGI-LQIKTS 339 + + + + + W + + + +R DG+ + L Sbjct: 350 DKATQLTLYDIME-DDRSGVDWRINRI---LSEKVCFLGEHTVRAEDGSMVEVDLNANLV 405 Query: 340 SGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVD 399 S E + DIS E+++ + + D +TGLPNR + L + Sbjct: 406 SYGEQQVICMVLRDIS--------ERKRFEGELMHMAHHDALTGLPNRTLFFDRLRQGLY 457 Query: 400 KAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQF 455 K V + +D + + D+LG+ D L EV +R R ++ + R+ G +F Sbjct: 458 KKERSGKMLAVIYLDLDRFKIINDTLGHHTGDMLLKEVADRLRGVVRKADTISRLGGDEF 517 Query: 456 VLVS-LENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTA 512 ++ ++ +A+++ +V S P ++ +T S+G++ G + LL A Sbjct: 518 TIIIDEIATPADSLLVAEKILHVFSAPFRLEKHEMFITASMGVTLYPNDGDTAEKLLKNA 577 Query: 513 HNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGEL 572 AM + ++ G N +QFFS MN V ERL + L+ A++ N+ L YQP++ TG + Sbjct: 578 DTAMYHAKEEGRNTYQFFSEEMNSRVSERLSMETGLRHALARNEFLLHYQPRVNTTTGRI 637 Query: 573 YGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPAL 632 G+EAL RW P G + P FIPLAEE G I IG WV+ C Q W+ + Sbjct: 638 VGVEALIRWQQPQKGLILPDAFIPLAEETGLIIPIGEWVLRNTCTQARAWQEAGFAQMRI 697 Query: 633 SVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGV 692 SVN+S F + LP+ + + G+ L +EITES++M + + L++MG+ Sbjct: 698 SVNISCRQFTHDNLPDTIRGILRETGLQPSCLELEITESVIMLNPERAISLLNELKEMGI 757 Query: 693 GLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVV 752 +++DDFGTG+S LS L LP +KIDKSFV K L+ I ++G ++ L +V Sbjct: 758 SIAIDDFGTGYSSLSLLKRLPADILKIDKSFVSGIPGNKSDETLVATIINLGHNMGLGLV 817 Query: 753 AEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVL 795 AEGVE +EQ L + +C+ +QGY+FS+PLPAE + + + Sbjct: 818 AEGVERQEQLHFLEERNCQEVQGYYFSKPLPAETLQPLLKNGT 860 Score = 78.1 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 20/157 (12%), Positives = 50/157 (31%), Gaps = 8/157 (5%) Query: 7 DNAADGIFFPALEQNMMGAVLINEN-DEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDL 65 + + + Q +L++ + ++ N A ++L Y ++ + ++ D Sbjct: 306 RKDTEKRYRSVISQASDIILLVDIDSRRILEANLAFQRLLNYAPDKATQLTLYDIMEDDR 365 Query: 66 RPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDA 125 + E + +DGS + + VS + ++RD Sbjct: 366 SGVDWR-----INRILSEKVCFLGEHTVRAEDGSMVEVDLNANLVSYGEQQVICMVLRDI 420 Query: 126 SVEMAQKEQTRQL--IIAVDHLDRPVIVLDPERHIVQ 160 S + + + A+ L + D R + Sbjct: 421 SERKRFEGELMHMAHHDALTGLPNRTLFFDRLRQGLY 457 Score = 77.3 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 20/150 (13%), Positives = 58/150 (38%), Gaps = 5/150 (3%) Query: 116 VYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPE-RHIVQCNRAFTEMFGYCIS 174 Y+ + + +K+ ++ + ++++D + R I++ N AF + Y Sbjct: 291 TGYILYAKLLASRKERKDTEKRYRSVISQASDIILLVDIDSRRILEANLAFQRLLNYAPD 350 Query: 175 EASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDV 234 +A+ + ++ + + R+ ++L + E + G + + + + V Sbjct: 351 KATQLTLYDIM--EDDRSGVDWRINRILSEKVCFLGEHTVRAEDGSMVEVDLNANLV--S 406 Query: 235 LAHLQNLVMTFSDITEERQIRQLEGNILAA 264 Q + M DI+E ++ ++ Sbjct: 407 YGEQQVICMVLRDISERKRFEGELMHMAHH 436 >UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21SH7_RHOFD Length = 658 Score = 763 bits (1971), Expect = 0.0, Method: Composition-based stats. Identities = 166/683 (24%), Positives = 294/683 (43%), Gaps = 55/683 (8%) Query: 133 EQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPA 192 E + + + ++V+D ++ N + +F E G ++ E Sbjct: 3 ENLINFQLILTTISDGIVVVDQRGVVLYANESAERLF--ERGELVGKDLAVPIHSGETRQ 60 Query: 193 DNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEER 252 D L+ +G W + +P+ V+ DITE + Sbjct: 61 D------------------INLIRPSG-IGWAELRSAPIT--WDKQPAFVICVRDITERK 99 Query: 253 QIRQLEGNILAAMC---SSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSH 309 + + I R + + S + + P S H Sbjct: 100 TSDLGLHLADTVFDSTREGLMVTDSAQRIVRINPAFSEITGYSAADVLDQTPALLRSGRH 159 Query: 310 --------GAEIQNAQSWSATI--RQRDGAPAGILQ---IKTSSGAETSAFIERVADISQ 356 I + W + R+++ L + ++ + D+S+ Sbjct: 160 DSAFYAAMWDSINVSGHWQGEVWNRRKNSEIYPQLISIDVIRDHTGRVCNYVAVLTDLSK 219 Query: 357 HMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVD 412 S+ ++ L DP+T LPNR L + L ++ A + ++ +D Sbjct: 220 --------LRSSQLELDFLAHHDPLTRLPNRLLLLSRLQHGIELAQRDGTHLALLMLDLD 271 Query: 413 HIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQIA 471 +D+ DS G+ D+ L V R ++++ + R G +F ++ + ++A Sbjct: 272 RFKDINDSFGHLVGDELLQLVATRLVKQVRTIDTVGRFGGDEFSVLMEDVAGAEQAARVA 331 Query: 472 DELRNVVSKPIMID-DKPFPLTLSIGISY--DLGKNRDYLLSTAHNAMDYIRKNGGNGWQ 528 +++ V+S+P + + S+GIS D G + +L A +A+ + G + Sbjct: 332 NDIIRVLSEPYGLSSGVEVRIGASVGISIYPDNGLTPELMLQQADSALYQAKIEGRGRFA 391 Query: 529 FFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGH 588 +FS ++ + + R+ + L+ AI+ +L++ YQPQ+ +G + G EAL RW P+ G Sbjct: 392 YFSESLTQAARARIDIEVRLRRAITQGELRVYYQPQVDIPSGRIVGAEALVRWQCPIEGL 451 Query: 589 VPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPN 648 VPP+RFI +AE G I I WV+ E C+Q WR+ + L+VNLSA F + Sbjct: 452 VPPARFITIAEATGLIGEIDDWVLRETCQQGQRWRAAGLPTLTLAVNLSAYQFLQGDISQ 511 Query: 649 QVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSR 708 V+ + G L +E+TES +M+ + + + + L+ +GV L++DDFGTG+S L+ Sbjct: 512 TVAQVLRDTGYPAAFLELELTESALMQREAQAIQMLDRLKALGVRLAIDDFGTGYSSLAY 571 Query: 709 LVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKI 768 L P+ +KIDK F+D + + ++ AI ++ SL L V+AEGVE KEQ L+ Sbjct: 572 LKLFPLDVLKIDKRFIDDIPAHRDDMEIVTAIIAMAHSLRLKVLAEGVENKEQLAYLQTQ 631 Query: 769 HCRVIQGYFFSRPLPAEEIPGWM 791 C QGY SRP+PA E Sbjct: 632 GCDQFQGYLTSRPVPAAEFEKLF 654 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 90/245 (36%), Gaps = 25/245 (10%) Query: 14 FFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYI 73 F L G V++++ V++ N +AE+L+ +R E++G ++ + I Sbjct: 8 FQLILTTISDGIVVVDQRGVVLYANESAERLF--ERGELVGKDLAVPIHS---------- 55 Query: 74 RHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKE 133 +++ L + G W + ++ + + ++ VRD + Sbjct: 56 -----------GETRQDINLIRPSG-IGWAELRSAPITWDKQPAFVICVRDITERKTSDL 103 Query: 134 QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPAD 193 D ++V D + IV+ N AF+E+ GY ++ P LL + Sbjct: 104 GLHLADTVFDSTREGLMVTDSAQRIVRINPAFSEITGYSAADVLDQTP-ALLRSGRHDSA 162 Query: 194 NRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQ 253 + + + Q E + E SI + D + N V +D+++ R Sbjct: 163 FYAAMWDSINVSGHWQGEVWNRRKNSEIYPQLISIDVIRDHTGRVCNYVAVLTDLSKLRS 222 Query: 254 IRQLE 258 + Sbjct: 223 SQLEL 227 >UniRef50_B8HNE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HNE5_CYAP4 Length = 877 Score = 763 bits (1971), Expect = 0.0, Method: Composition-based stats. Identities = 177/728 (24%), Positives = 309/728 (42%), Gaps = 51/728 (7%) Query: 100 KIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIV 159 + + + A+ L E ++ +QL ++ L L+ Sbjct: 158 WLPEEQSFAGAIADMVALALEARDRQQAEAELQKTNQQLRNILESLTSGFFSLNETAEFT 217 Query: 160 QCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTG 219 N + + +E G + Q+ + + E Sbjct: 218 YINPQAEPLLQHSRAELLGHNLWQFF-PALRDSSFFPYYQEAITDQVTVKFEDYYPRLN- 275 Query: 220 EKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPF--HEMGEI 277 W++ I P + + +DI+E ++ + + + Sbjct: 276 --RWLEIHICPFQ------TGVAVYLADISERKRTEAALMETKERYALAIQGANDGIWDW 327 Query: 278 ICRNIESVLNESHVSLFALR----NGMPIHWASSSHGAEIQN------------AQSWSA 321 N E + ++ + W S H +++ + + Sbjct: 328 NLVNNEIYFSSRWKTILGYSESEVDNCLEEWFSRIHPQDLERVKLKLNLHQQGQSSHFEE 387 Query: 322 T--IRQRDGAPAGILQ---IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLI 376 +R ++G +L +S + ++DIS EQ +++ + Sbjct: 388 EYRLRHKNGKYRWVLSRGIAVRNSEGKAYRMAGSLSDIS--------EQRLAQEQLMHDA 439 Query: 377 QFDPMTGLPNRNNLHNYLDDLVDKAVS-----PVVYLIGVDHIQDVIDSLGYAWADQALL 431 DP+TGLPNR + L ++ A V + +D + + DSLG+ D L+ Sbjct: 440 LHDPLTGLPNRTLFMDRLRQVIHHARRHRNYNFAVLFVDLDRFKVINDSLGHLAGDTLLI 499 Query: 432 EVVNRFREKLKPDQYLCRIEGTQFVLVSLEN-DVSNITQIADELRNVVSKPIMIDDKPFP 490 E+ +RF+ L+PD + R+ G +FV++ + +V +IA ++ +V +P +I+ + Sbjct: 500 ELAHRFQIGLRPDDTVARLGGDEFVILLDDLLEVEESIRIAHRIQTLVQQPFIINGQTVF 559 Query: 491 LTLSIGISYDLGKN--RDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAAL 548 + SIGI+ + ++ L A AM + GG+ F+ M+ RL L L Sbjct: 560 TSASIGIAPKDTHHHKPEHYLRNADIAMYRAKAAGGSRHVLFTSVMHTSALVRLQLETDL 619 Query: 549 KEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIG 608 ++A+ +L+L YQP + T ++ G EAL RW P G + P FI +AEE G I IG Sbjct: 620 RQALERQELRLQYQPILCLNTDQIVGFEALVRWQHPRDGLIAPGHFITVAEETGLIVPIG 679 Query: 609 RWVIAEACRQLAEWRSQNIH--IPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTV 666 WV+ EACRQ+ W +Q +SVNLS+ L QV + G+ QL + Sbjct: 680 EWVLQEACRQMQCWHTQFGQVLPLMVSVNLSSKQLSQPDLLQQVDRMLAETGLRPQQLKL 739 Query: 667 EITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDR 726 EITESM++++ + + L++ + LS+DDFGTG+S L+ L LP+ +KID+SF+ Sbjct: 740 EITESMILDNTEVARQTLLKLKERQIQLSMDDFGTGYSSLNYLHRLPIDLLKIDRSFIHE 799 Query: 727 CLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEE 786 + + L+ AI SI SL + V+AEG+ET+ Q E L ++ C QGY FS PL E Sbjct: 800 MDSGEESRELVRAIISIAHSLKMQVIAEGIETRSQLEQLHELGCEFGQGYLFSTPLDPEP 859 Query: 787 IPGWMSSV 794 ++ Sbjct: 860 AADFLQQA 867 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 39/263 (14%), Positives = 89/263 (33%), Gaps = 9/263 (3%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + + LE G +NE E + NP AE L + R E++G+N+ Sbjct: 184 QAEAELQKTNQQLRNILESLTSGFFSLNETAEFTYINPQAEPLLQHSRAELLGHNLWQFF 243 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLAL 121 P + Y + + E + + W + VY + Sbjct: 244 PALRDSSFFPYYQEAITDQ----VTVKFEDYYPRLN---RWLEIHICPFQTGVAVYLADI 296 Query: 122 VRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG--M 179 E A E + +A+ + + + + + + + + GY SE Sbjct: 297 SERKRTEAALMETKERYALAIQGANDGIWDWNLVNNEIYFSSRWKTILGYSESEVDNCLE 356 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 + + ++ + +++ ++E+ L + G+ W+ + V + Sbjct: 357 EWFSRIHPQDLERVKLKLNLHQQGQSSHFEEEYRLRHKNGKYRWVLSRGIAVRNSEGKAY 416 Query: 240 NLVMTFSDITEERQIRQLEGNIL 262 + + SDI+E+R ++ + Sbjct: 417 RMAGSLSDISEQRLAQEQLMHDA 439 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 762 bits (1970), Expect = 0.0, Method: Composition-based stats. Identities = 182/668 (27%), Positives = 296/668 (44%), Gaps = 47/668 (7%) Query: 170 GYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIK--AS 227 G + + + R +++ + L L GE + S Sbjct: 425 GRGPAGLAVRSGAPQVVHDIHRHPQLQRWRRIAAERGFKAAAALPLRSDGETYGVLCLVS 484 Query: 228 ISPVYDVLAHLQNLVMTFSDIT----------EERQIRQLEGNILAAMCSSPPFHEMGE- 276 + P ++ L DI E++Q+ A+ S + Sbjct: 485 VDPQAFDADEVELLAELADDIAFGIRTLRARVEQQQLAATLELRNRAIEESTNAIVISHA 544 Query: 277 ---------IICRNIESVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQNAQSWSAT 322 + + L + A ++ T Sbjct: 545 DRAADNPIIYVNPAFTVTTGYGADEVLGRNARFLIDNDWDQPAVERLREAVREGGDARVT 604 Query: 323 IR--QRDGAPAG---ILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQ 377 +R +DG L + E S FI D++ E+ + +EQ Sbjct: 605 LRTYHKDGQLLWNEISLASIRDAQGEVSHFIAIFNDVT--------ERVRYEAELEQQAT 656 Query: 378 FDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEV 433 D +TGL NRN L++ + + +A V L+ +D + + DSLG+A D L E Sbjct: 657 HDALTGLANRNLLNDRMQRAIIRAARDGHAVAVMLLDLDRFKLINDSLGHAAGDALLQET 716 Query: 434 VNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIAD-ELRNVVSKPIMIDDKPFPLT 492 R ++ + R+ G +F++V + + ++ +++P++++ + T Sbjct: 717 ARRLSASVRRGDTVARLGGDEFMVVMSDMSAEDAAAALAAKVLESLAEPMLLNGREIVAT 776 Query: 493 LSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKE 550 SIG+S G+ LL A AM ++ G N +QF++P MNE + ERL L +L+ Sbjct: 777 GSIGVSLYPRDGEAAATLLKHADVAMYRAKELGRNRFQFYAPEMNERILERLELENSLRR 836 Query: 551 AISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRW 610 A+ N++L+L YQP++ G + G EAL RW P G V P+ FIPLAEE G I IG W Sbjct: 837 ALENDELELHYQPKVSLRDGRVIGAEALIRWRHPQLGMVSPADFIPLAEETGLIVPIGEW 896 Query: 611 VIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITE 670 V+ ACRQL W + +++VN+SA F+ QL + ++ A+ A + QL VE+TE Sbjct: 897 VVDHACRQLRAWLDAGLPQISVAVNVSARQFQHEQLTHVLARALAAHRLPPGQLHVEVTE 956 Query: 671 SMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTE 730 S +M ++ L+++GV +S+DDFGTG+ L+ L P+ IKID+ FV T Sbjct: 957 SAVMCEPERTIFTLRELKNIGVRISLDDFGTGYCSLNYLKRFPIDSIKIDRCFVTDLATS 1016 Query: 731 KRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGW 790 A+ I S+ SLN TV+AEGVE + Q + LR+ C +QG+ FSRPLPA E Sbjct: 1017 AEDAAIALMIVSLAHSLNQTVIAEGVENEAQLDFLRRHGCDEMQGFLFSRPLPAAEFARL 1076 Query: 791 MSSVLPLK 798 +++ L+ Sbjct: 1077 LAAGTRLQ 1084 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 105/315 (33%), Gaps = 13/315 (4%) Query: 63 RDLRPAHPEYIRHNREGGKARVEGMS-RELQLEKKDGSKIWT-RFALSKVSAEGKVYYLA 120 + R E R +G + L L D L A+ + + Sbjct: 451 QRWRRIAAERGFKAAAALPLRSDGETYGVLCLVSVDPQAFDADEVELLAELADDIAFGIR 510 Query: 121 LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERH----IVQCNRAFTEMFGYCISEA 176 +R + A++ +++ +R I+ N AFT GY E Sbjct: 511 TLRARVEQQQLAATLELRNRAIEESTNAIVISHADRAADNPIIYVNPAFTVTTGYGADEV 570 Query: 177 SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLA 236 G L++ ++ RL++ + + + + G+ +W + S++ + D Sbjct: 571 LGRNARFLID-NDWDQPAVERLREAVREGGDARVTLRTYHKDGQLLWNEISLASIRDAQG 629 Query: 237 HLQNLVMTFSDITEERQIRQLEGNIL--AAMCSSPPFHEMGEIICRNIESVLNESHVSLF 294 + + + F+D+TE + A+ + + + + R I + H Sbjct: 630 EVSHFIAIFNDVTERVRYEAELEQQATHDALTGLANRNLLNDRMQRAIIRAARDGHAVAV 689 Query: 295 ALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADI 354 L + + S G +A T R+ + + G E F+ ++D+ Sbjct: 690 MLLDLDRFKLINDSLGHAAGDA-LLQETARRLSASVRRGDTVARLGGDE---FMVVMSDM 745 Query: 355 SQHMAALALEQEKSR 369 S AA AL + Sbjct: 746 SAEDAAAALAAKVLE 760 Score = 87.7 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 75/219 (34%), Gaps = 29/219 (13%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDE----VMFFNPAAEKLWGYKREEVIGNNIDML 60 A + A+E++ V+ + + +++ NPA GY +EV+G N L Sbjct: 519 QQLAATLELRNRAIEESTNAIVISHADRAADNPIIYVNPAFTVTTGYGADEVLGRNARFL 578 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKV--YY 118 I D E +R G L+ KDG +W +L+ + ++ Sbjct: 579 IDNDWDQPAVERLREAVREGGDA----RVTLRTYHKDGQLLWNEISLASIRDAQGEVSHF 634 Query: 119 LALVRDASVEMAQKEQTRQL------------IIAVDHLDRPVIVLDPERHIVQC----N 162 +A+ D + + + + Q + D + R +I + H V Sbjct: 635 IAIFNDVTERVRYEAELEQQATHDALTGLANRNLLNDRMQRAIIRAARDGHAVAVMLLDL 694 Query: 163 RAFTEM---FGYCISEASGMQPDTLLNIPEFPADNRIRL 198 F + G+ +A + L+ D RL Sbjct: 695 DRFKLINDSLGHAAGDALLQETARRLSASVRRGDTVARL 733 >UniRef50_C5T198 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T198_ACIDE Length = 948 Score = 762 bits (1970), Expect = 0.0, Method: Composition-based stats. Identities = 174/688 (25%), Positives = 286/688 (41%), Gaps = 33/688 (4%) Query: 129 MAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIP 188 A + L +D + + + ++ + + + +G D +L P Sbjct: 264 RALARSEKSLKAVLDAVPDLMFEMTRSGRYLRVHTRVPGLTERVPEQIAGRTIDEVL-PP 322 Query: 189 EFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248 + R L Q +F L G W + S++ + D V+ D+ Sbjct: 323 DAAGVVRTALTQAEATGHTQGQQFALEMTDGRH-WFELSVARIQDPGFADPRFVVLSRDV 381 Query: 249 TEERQIRQLEGNILAAMCSSPPFHEMGEIIC---RNIESVLNESHVSLFALRNGMPIHWA 305 T+ Q + A+ +P + + S + + P Sbjct: 382 TQRMQDLDALRKLRHAVEQTPHSIIITNLRGQIEYVNPSFTTVTGYGSDEVMGRNPRMLG 441 Query: 306 SS--------SHGAEIQNAQSWSATI--RQRDGAPAGI---LQIKTSSGAETSAFIERVA 352 + + + +W + R + G + + +I Sbjct: 442 AGKTSAEVVAQMWERLLSGLAWKGELLNRHKTGREVWEYVSISPMRDEQGAITHYISVQE 501 Query: 353 DISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS----PVVYL 408 DIS E++ + + I L FD +TGLPNR + + + Sbjct: 502 DIS--------ERKSNEERIRHLANFDALTGLPNRAMFSARFSQALGLSQRSEGSLALLY 553 Query: 409 IGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNIT 468 + +D ++V DSLGYA D L++V +R + L+ + + R G +F++V Sbjct: 554 LDLDRFKNVNDSLGYAVGDGVLIDVAHRLKALLRDEDTVSRYGGDEFLVVLPLTTAQGAV 613 Query: 469 QIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNG 526 A+ L +SK ++ +T S+GI+ G + + L A AM ++ G + Sbjct: 614 HFAERLHGELSKACQVESHALLVTFSVGIAMYPGDGSDMEALTHHAEVAMYKAKEMGRDH 673 Query: 527 WQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLH 586 + FFS M L + L+ AI+ ++ L +QPQ + G+EAL RW P Sbjct: 674 YCFFSADMQAQSSRLLRIENGLRTAIAQGEMSLHFQPQWRVHDRRMVGVEALLRWTHPEL 733 Query: 587 GHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQL 646 G V P+ FIP+AE G+I +IG WV+ A L WR ++VNLS FR L Sbjct: 734 GVVGPAEFIPVAESSGQIIDIGLWVLDTALACLRRWRDAGHTDLTVAVNLSLAQFRHPDL 793 Query: 647 PNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGL 706 V A+ G+ L +E+TES+ M + ++ L D+GV LS+DDFGTG+S Sbjct: 794 VEVVQKALQRAGVPAEVLELELTESIAMHEPEKAIACVRALADLGVQLSLDDFGTGYSSF 853 Query: 707 SRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLR 766 S L L V +KID+SFV T R ++++ AI + +SL L +AEGVET Q E L Sbjct: 854 SYLQRLRVHRLKIDQSFVRNLDT-ARGMSIVRAIVEMSRSLGLATIAEGVETPHQLEALA 912 Query: 767 KIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 + C ++QGY SRPLP + + Sbjct: 913 GLSCDMVQGYHLSRPLPVPALEALLEQR 940 Score = 178 bits (452), Expect = 9e-43, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 99/258 (38%), Gaps = 8/258 (3%) Query: 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRD 64 A ++ L+ + + + + L E++ G ID ++P D Sbjct: 264 RALARSEKSLKAVLDAVPDLMFEMTRSGRYLRVHTRVPGLTERVPEQIAGRTIDEVLPPD 323 Query: 65 LRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEG--KVYYLALV 122 + G + + + E+ DG W +++++ G ++ L Sbjct: 324 AAGVVRTALTQAEATGHTQGQQFALEMT----DGR-HWFELSVARIQDPGFADPRFVVLS 378 Query: 123 RDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPD 182 RD + M + R+L AV+ +I+ + I N +FT + GY E G P Sbjct: 379 RDVTQRMQDLDALRKLRHAVEQTPHSIIITNLRGQIEYVNPSFTTVTGYGSDEVMGRNP- 437 Query: 183 TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 +L + A+ ++ + L + E L +TG ++W SISP+ D + + + Sbjct: 438 RMLGAGKTSAEVVAQMWERLLSGLAWKGELLNRHKTGREVWEYVSISPMRDEQGAITHYI 497 Query: 243 MTFSDITEERQIRQLEGN 260 DI+E + + + Sbjct: 498 SVQEDISERKSNEERIRH 515 >UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YAT8_NITMU Length = 705 Score = 762 bits (1970), Expect = 0.0, Method: Composition-based stats. Identities = 179/711 (25%), Positives = 317/711 (44%), Gaps = 42/711 (5%) Query: 116 VYYLALVRDASVEMAQKE-------QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEM 168 + A+ A +E V+ ++V D ++ N+ + EM Sbjct: 4 PAFFAVFNSKETRKALEEKTAEFSRSLSLCKATVELTAEGLLVTDRVGRVLYHNQFYLEM 63 Query: 169 FGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWK--TARDQDEFLLLTRTGEKIWIKA 226 + M ++ R + A + LL +I+ + Sbjct: 64 WPIPEEFMDNMSHQAIVQYGSSQLKEPQRFLHATEEIYHAWPPESLDLLQFNDCRIFERY 123 Query: 227 SISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICR 280 + + V + ++ V + +ITE R+ + + A + SS + ++ Sbjct: 124 TKAKVLEGQNMVR--VWSLRNITERREADAYKAQLAAIVESSNDAIIVQDLNGIITSWNA 181 Query: 281 NIESVLNESHVSLFALRNGMPIHWASSSHGAEI-------QNAQSWSATIRQRDGAPAGI 333 E + + + I +I + A + + P + Sbjct: 182 GAEGLFGYRASEVIGSSVEILIPPDLREEEGDIMCLIKSGRRADHFETVRWGKGRKPIDV 241 Query: 334 LQIKTSSGAETSAFIE---RVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNL 390 ++ I V DI+Q +++S++ IE L +D +TGLPNR L Sbjct: 242 SVTISAMKDRAGNIIGASKIVRDITQ--------RKESQERIEYLAHYDSLTGLPNRTLL 293 Query: 391 HNYLDDLVDKAVS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQY 446 + L ++ A + + +D + V DSLG+ D+ L V R + ++ Sbjct: 294 SDRLRIAIENARRYSIRLALLFVDIDRFKLVNDSLGHEIGDKLLKAVAQRMQSTVRQADT 353 Query: 447 LCRIEGTQFVLVSL-ENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGK 503 + R+ G +FV++ ++ + A++L +S+P I++ LT SIGIS D GK Sbjct: 354 VSRVGGDEFVVLLSRIETATDAARSAEKLITSISQPYQIEEHELLLTASIGISIYPDNGK 413 Query: 504 NRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQP 563 + L A AM + G N +QF+S + ERL L L+ A+S +++ +YQP Sbjct: 414 DASSLTRNADAAMYSAKGQGRNRYQFYSEDLTYAAAERLRLEHDLRGALSRDEIFPLYQP 473 Query: 564 QIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWR 623 QI TG + G+EAL RW+ G + P+ FIP+AE+ G I +G +++ +AC Q +W Sbjct: 474 QIELATGRVIGVEALMRWNRAGQGLISPASFIPVAEDSGLILALGEYILRKACLQARQWH 533 Query: 624 SQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKR 683 ++VN+SA+ FR N + V + G L +E+TES++M+ + ++ Sbjct: 534 EHQGFQGTIAVNVSAVQFRQNDFTDVVLRVLSETGFPPECLELEVTESVVMQGLESVVQK 593 Query: 684 IQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSI 743 + IL G+ L++DDFGTG+S LS L + +KID+SFV + A++ AI ++ Sbjct: 594 MGILESHGIKLAIDDFGTGYSSLSYLRQFAIDRLKIDQSFVRDLPGDADAQAIIRAIVAM 653 Query: 744 GQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSV 794 G+SL L V+AEGVET+ Q L+ I C QGY ++RP+ + + W+ + Sbjct: 654 GRSLGLRVMAEGVETEAQARFLQDIECTESQGYLYARPMKSNDFEAWLKTR 704 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 58/370 (15%), Positives = 126/370 (34%), Gaps = 24/370 (6%) Query: 15 FPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIR 74 +E G ++ + V++ N ++W E + + ++ + + + Sbjct: 34 KATVELTAEGLLVTDRVGRVLYHNQFYLEMWPIPEEFMDNMSHQAIV--QYGSSQLKEPQ 91 Query: 75 HNREGGKARVEGMSRE-LQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKE 133 + E L L + + +I+ R+ +KV + + +R+ + Sbjct: 92 RFLHATEEIYHAWPPESLDLLQFNDCRIFERYTKAKVLEGQNMVRVWSLRNITERREADA 151 Query: 134 QTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPAD 193 QL V+ + +IV D I N +FGY SE G +L P+ + Sbjct: 152 YKAQLAAIVESSNDAIIVQDLNGIITSWNAGAEGLFGYRASEVIGSSV-EILIPPDLREE 210 Query: 194 NRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQ 253 + + D E + + + I + +IS + D ++ DIT+ ++ Sbjct: 211 EGDIMCLIKSGRRADHFETVRWGKGRKPIDVSVTISAMKDRAGNIIGASKIVRDITQRKE 270 Query: 254 IRQLEG--NILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGA 311 ++ ++ P + + + IE+ S + + S G Sbjct: 271 SQERIEYLAHYDSLTGLPNRTLLSDRLRIAIENARRYSIRLALLFVDIDRFKLVNDSLGH 330 Query: 312 EIQN------AQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVAD--------ISQH 357 EI + AQ +T+RQ D + ++ + IE D I+ Sbjct: 331 EIGDKLLKAVAQRMQSTVRQAD----TVSRVGGDEFVVLLSRIETATDAARSAEKLITSI 386 Query: 358 MAALALEQEK 367 +E+ + Sbjct: 387 SQPYQIEEHE 396 Score = 87.0 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 46/271 (16%), Positives = 99/271 (36%), Gaps = 10/271 (3%) Query: 3 LTDADNAA--DGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML 60 +T+ A +E + ++ + N + +N AE L+GY+ EVIG+++++L Sbjct: 143 ITERREADAYKAQLAAIVESSNDAIIVQDLNGIITSWNAGAEGLFGYRASEVIGSSVEIL 202 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA 120 IP DLR + + + G R + + + + + K A + Sbjct: 203 IPPDLREEEGDIMCLIKSG--RRADHFETVRWGKGRKPIDVSVTISAMKDRAGNIIGASK 260 Query: 121 LVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 +VRD + +E+ L + L ++ D R ++ R ++ + Sbjct: 261 IVRDITQRKESQERIEYLAHYDSLTGLPNRTLLSDRLRIAIENARRYSIRLALLFVDIDR 320 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 + E + Q + T R D G++ + S + Sbjct: 321 FKLVNDSLGHEIGDKLLKAVAQRMQSTVRQADTVS--RVGGDEFVVLLS--RIETATDAA 376 Query: 239 QNLVMTFSDITEERQIRQLEGNILAAMCSSP 269 ++ + I++ QI + E + A++ S Sbjct: 377 RSAEKLITSISQPYQIEEHELLLTASIGISI 407 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 762 bits (1968), Expect = 0.0, Method: Composition-based stats. Identities = 179/644 (27%), Positives = 276/644 (42%), Gaps = 42/644 (6%) Query: 176 ASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLT---RTGEKIWIKASISPVY 232 + D L R L++ E + GE + Sbjct: 214 VAQRTADRALGELASRPLVTCRADDSLYRVRMLLAERHIRHIGVLDGEGELVDLVS--FK 271 Query: 233 DV-LAHLQNLVMTFSDITEER-----QIRQLEGNILAAMCSSPPFHEMGEI------ICR 280 D+ V D R ++ + SS + + + Sbjct: 272 DILSGMELAYVHELHDALRARDLALSASQRDLYLAEKVIESSLEGVMVTDAHARILSVNP 331 Query: 281 NIESVLNESHVSLFALR-----NGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGI 333 + + + L +G + + W + R++ G Sbjct: 332 AFTRMTGYAPEEVVGLNPSVLNSGRQSPAFYARMWDGLLGDGQWQGEVWNRRKTGEVYPQ 391 Query: 334 ---LQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNL 390 + + + DIS+ +++ I L +DP+TGLPNR L Sbjct: 392 LLHITAIRDREGVLTHYAALFTDISR--------LKETEARIRDLAYYDPLTGLPNRRLL 443 Query: 391 HNYLDDLVDKAVSP----VVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQY 446 + L + A V + +D + + DSLG+A D+ L+E+ R R L+ D Sbjct: 444 DDRLQVELAHAARLRCRLAVMFVDLDRFKRINDSLGHAVGDKLLVEIAARLRASLRDDDT 503 Query: 447 LCRIEGTQFVLVSLEND-VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGK 503 + R+ G +F++V +A + + +P+ ++ + +T S+G++ D + Sbjct: 504 VARMGGDEFLVVLNNLSGPDEAATMARRMVAELRRPVNVEGRELVVTTSVGVAVYPDDSR 563 Query: 504 NRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQP 563 + D L+ A AM + G N +Q F PAMN ERL L AL A+ ++L+L +QP Sbjct: 564 DADTLVKHADVAMYRAKDEGRNSFQLFEPAMNARSLERLALETALHRALPRDELQLYFQP 623 Query: 564 QIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWR 623 + AE GEL +EAL RW P G V P+ FIPLAE+ G I IG WV+ AC W Sbjct: 624 VMKAEGGELVAVEALLRWRHPDLGLVSPADFIPLAEDTGLIVPIGEWVLRSACEHHRRWC 683 Query: 624 SQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKR 683 + VN+SA FR V + G+ LT+E+TESM+M+ R Sbjct: 684 EAGGAPLHMMVNISARQFREEGFAAMVGSVLAETGMTPGDLTLELTESMLMDDTDRALAR 743 Query: 684 IQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSI 743 + LR +GV L++DDFGTG+S L+ L P+ E+KID+ FV R AL+ AI S+ Sbjct: 744 LDHLRALGVCLAIDDFGTGYSSLAYLKRFPIDELKIDRLFVRGIDRNTRDAALVSAIVSL 803 Query: 744 GQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI 787 G SL L VVAEGVET ++LR+ C + QG+ FS PLP EE Sbjct: 804 GHSLGLRVVAEGVETAAHLDVLRRQGCDLAQGFHFSPPLPWEEF 847 >UniRef50_Q60A84 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q60A84_METCA Length = 810 Score = 761 bits (1966), Expect = 0.0, Method: Composition-based stats. Identities = 197/805 (24%), Positives = 350/805 (43%), Gaps = 50/805 (6%) Query: 17 ALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHN 76 LEQ+ G V V+ +P E ++G + ++ I + P Sbjct: 24 ILEQHPDGHV------TVVHADPGMEDMFGAEPGRLL---HAAGIEASMWPEDRRRAEPR 74 Query: 77 REGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS-AEGKVYYLALVRDASVEMAQKEQT 135 +E + + E +E W + ++G + + + D + + Q Sbjct: 75 QETAQRGPMPLRTEFPVEHPVRGPRWLELSAVPEPLSDGAIRWHGFLTDVTERRQAEVQA 134 Query: 136 RQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNR 195 + A+DHL V + + E V N A+ + GY E + ++ P+ + + Sbjct: 135 GLVGKALDHLAEMVSICNAEGRFVYVNEAWRKALGYRGEEFLNLSVAEVV--PDLGSRSW 192 Query: 196 IRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIR 255 + + + Q E + TR G ++ + + Y ++ D ++ Sbjct: 193 AGHFREIREKTSAQWETIHRTRDGHRVPV--VVDARYLEHEGCGYVLALVRDTRLLKRTD 250 Query: 256 ----QLEGNILAAMCSSPPFHEMGEIICRNI--------------ESVLNESHVSLFALR 297 + E + +SP + CR + ++ + L Sbjct: 251 TALLRREREFRSLAENSPDSIMRYDRDCRIVYLNPSLENTLLFSASDMIGRTPTELHPGD 310 Query: 298 NGMPIHWASSSHGAEIQNAQSWSATIR--QRDGAPAGI-LQIKTSSGAETSAFIERVADI 354 + + A ++ + I L + E + + DI Sbjct: 311 ERFETYESKLRAVVATGKADEIELLLQGTHKGPRLLHIRLVAEHDPDGECTGVLAVGRDI 370 Query: 355 SQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDD----LVDKAVSPVVYLIG 410 ++ + R+ I++L FDP+T LPNR L++ + + + L+ Sbjct: 371 TEVD--------EYRRRIQRLAFFDPLTDLPNRALLNDRIRQCLTDAAARGSQFGLMLLD 422 Query: 411 VDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLE-NDVSNITQ 469 +D ++V D+LG++ D+ L E R ++ + R+ G +F ++ D ++ Sbjct: 423 LDRFKEVNDTLGHSAGDRLLCEAARRLNACVRGYDTVARLGGDEFSILLPVVRDRGDLRA 482 Query: 470 IADELRNVVSKPIMIDDKPFPLTLSIGISYD-LGK-NRDYLLSTAHNAMDYIRKNGGNGW 527 IA + + +I+ K +++SIGI G+ + D L A AM + ++ G N + Sbjct: 483 IAGRILEAFGEAFIIEGKELFVSVSIGIVLHMEGQCDADRLFKQADLAMYHAKRQGRNNF 542 Query: 528 QFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHG 587 QF++ + V +R + AL++A+ N +L+L YQPQ+ G + G EAL RW P G Sbjct: 543 QFYAEELAVQVSDRTAMEGALRKALGNGELELYYQPQVALPAGRIVGAEALLRWRHPQEG 602 Query: 588 HVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLP 647 + P RFIP+AEE G I ++G WV+ ACR+ W ++VNLS F N LP Sbjct: 603 IMTPDRFIPIAEETGLIRDLGHWVLTTACRRAVYWHRTVDSPFKVAVNLSTRQFVRNDLP 662 Query: 648 NQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLS 707 ++ + G L +EITES+++ +D E+ ++ L DMG +S+DDFGTG+S LS Sbjct: 663 GELQRIVQDTGCRPEWLELEITESLLLGNDAEVGAALEELHDMGFAISIDDFGTGYSALS 722 Query: 708 RLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRK 767 L P+ +IKID+SF+ ++ + L++AI SI +L L V+AEGVET Q E L Sbjct: 723 YLNRFPLDQIKIDRSFIQGFPADREKVELVKAIISIAGALQLEVIAEGVETSHQAEYLHA 782 Query: 768 IHCRVIQGYFFSRPLPAEEIPGWMS 792 CR+ QG+ F RPLP + ++ Sbjct: 783 QGCRLAQGHLFGRPLPQDRFERLLA 807 Score = 86.6 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 89/302 (29%), Gaps = 20/302 (6%) Query: 1 MKLTD-ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDM 59 +K TD A + F E + + + + +++ NP+ E + ++IG Sbjct: 246 LKRTDTALLRREREFRSLAENSPDSIMRYDRDCRIVYLNPSLENTLLFSASDMIGRTPTE 305 Query: 60 LIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL 119 L P D R E + + + LQ K + R L Sbjct: 306 LHPGDERFETYESKLRAVVA-TGKADEIELLLQGTHKGPRLLHIRLVAEHDPDGECTGVL 364 Query: 120 ALVRDASVEMAQKEQTRQLIIA--VDHLDRPVIVLDPERHIVQCNRAFTE-------MFG 170 A+ RD + + + ++L + L ++ D R + A + Sbjct: 365 AVGRDITEVDEYRRRIQRLAFFDPLTDLPNRALLNDRIRQCLT--DAAARGSQFGLMLLD 422 Query: 171 YCI----SEASGMQP-DTLLNIPEFPADNRIRLQQLLWKTARDQDEFLL--LTRTGEKIW 223 ++ G D LL + +R + + D+ LL + G+ Sbjct: 423 LDRFKEVNDTLGHSAGDRLLCEAARRLNACVRGYDTVARLGGDEFSILLPVVRDRGDLRA 482 Query: 224 IKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIE 283 I I + ++ + S + + + + + RN Sbjct: 483 IAGRILEAFGEAFIIEGKELFVSVSIGIVLHMEGQCDADRLFKQADLAMYHAKRQGRNNF 542 Query: 284 SV 285 Sbjct: 543 QF 544 >UniRef50_Q0AAW8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAW8_ALHEH Length = 1051 Score = 761 bits (1966), Expect = 0.0, Method: Composition-based stats. Identities = 208/884 (23%), Positives = 352/884 (39%), Gaps = 102/884 (11%) Query: 3 LTDA-DNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML- 60 + A A + + E + V ++ + ++ N A E G RE +G + + Sbjct: 177 MAQADLAARERAYETLAENSPDIIVRLDRDLRHLYVNRALEAFTGIPREHYLGRTHEEVG 236 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSK--VSAEGKVYY 118 L ++ E G+ S + +G + + Sbjct: 237 FRGKLLATWERHLNQALESGEPGTMTFSHPDR----EGRVRHFEALIVPETDDTGNIAHV 292 Query: 119 LALVRDASVEMAQKE---QTRQLIIAVDHLDRPVIVLD---------------------- 153 L + D + + +E + R L A+ ++ +I +D Sbjct: 293 LCISHDVTGHVQAREEISRLRDLYAALSQANQVIIRIDDPKELFQRTCEVVVRYGRLDMA 352 Query: 154 -------PERHIVQCNRAFTEMFGY-----------------CISEASGMQPDTLLNIPE 189 + +RA +M GY + A + ++ + Sbjct: 353 WIGLVDQASGRVTPVSRAGRDM-GYLDEIRISTDPARPESRGPVGRAIRQRRASVFDRFL 411 Query: 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTG-----------EKIWIKASISPVYDVLAHL 238 D + R F L E+ + I + ++ L Sbjct: 412 DHPDAGPWQAAAARRGFRSVAAFPLFQSDDCIGALAVYSSEERFFSADIIQLMAEMTGDL 471 Query: 239 QNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEI------ICRNIESVLNESHVS 292 + + + S + + + R Sbjct: 472 SFALDNIEREQARKAAEEQMRLAEEVFEHSTEAIIITDARQRIMRVNRAFTERTGYVPDE 531 Query: 293 LFA-----LRNGMPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAGIL---QIKTSSGA 342 + LR+ A ++ W I R++ G A + + Sbjct: 532 VLGRRPHMLRSPHHTQQFYRRILARLRRHGFWEGEIWNRRKGGENAPLWLTLSVVRDEAG 591 Query: 343 ETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV 402 + +I D++ E + HI L Q DP+TGLPNR L + L + +A Sbjct: 592 RITHYIAVGLDLT--------ETKDREAHIRYLAQHDPVTGLPNRGLLADRLGQALRRAQ 643 Query: 403 ----SPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV 458 + + +D + + ++LG+ D+ L V R ++ + + RI QF+++ Sbjct: 644 DQHYRLALLSLDLDRFKIINETLGHVAGDEVLQTVAQRLQDHVNGAGTVSRIGSDQFLIL 703 Query: 459 SLEND-VSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNA 515 E + Q A+ L V++P+ + + + +GI+ G N + L S A A Sbjct: 704 LPEIHKPTEAAQAAERLMACVAEPLDLSGQELTPSSVVGIALYPEDGDNLETLHSHADAA 763 Query: 516 MDYIRKN-GGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYG 574 M ++ G G++FFS M +ERL L + L+ A+ + +L YQPQ+ G L G Sbjct: 764 MSMAKQASGHEGYRFFSSDMTSRARERLSLESRLRRALDRGEFRLHYQPQVSLADGTLTG 823 Query: 575 IEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSV 634 +EAL RWH G + P+RFIP+AEE G I +GRWV+ EACRQ WR + +SV Sbjct: 824 MEALLRWHAGDEGDISPARFIPIAEETGLIVPLGRWVLGEACRQNRAWRQAGLPALPVSV 883 Query: 635 NLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMM-EHDTEIFKRIQILRDMGVG 693 NLS + R + + V A+ G+ G L +E+TES+ + E D + Q LR+MG+ Sbjct: 884 NLSVVQLRRSDVVADVRRALETSGLPGDGLHLEVTESLFLSEDDPAVVTGFQTLREMGIS 943 Query: 694 LSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVA 753 L++DDFGTG+S L L LP+ ++KID+SFV A+ +AI SI +SL L V+A Sbjct: 944 LAIDDFGTGYSNLGYLKRLPIAKLKIDQSFVRGIGDSGHDTAINQAIISIARSLGLGVIA 1003 Query: 754 EGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPL 797 EGVET + +L+ + C IQG+++SRPL AE M++ PL Sbjct: 1004 EGVETAAELRVLQALGCDEIQGFYYSRPLDAERAGQLMAAPPPL 1047 Score = 84.7 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 60/194 (30%), Gaps = 10/194 (5%) Query: 110 VSAEGKVYYLALVRDASV---EMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFT 166 + G V+ L R + + + R ++ ++ LD + + NRA Sbjct: 158 LWWRGHVHGLEARRLRTELMAQADLAARERAYETLAENSPDIIVRLDRDLRHLYVNRALE 217 Query: 167 EMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKA 226 G G + + + A L Q L F R G +A Sbjct: 218 AFTGIPREHYLGRTHEEVGFRGKLLATWERHLNQALESGEPGTMTFSHPDREGRVRHFEA 277 Query: 227 SISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNIL-------AAMCSSPPFHEMGEIIC 279 I P D ++ +++ D+T Q R+ + A + E+ Sbjct: 278 LIVPETDDTGNIAHVLCISHDVTGHVQAREEISRLRDLYAALSQANQVIIRIDDPKELFQ 337 Query: 280 RNIESVLNESHVSL 293 R E V+ + + Sbjct: 338 RTCEVVVRYGRLDM 351 >UniRef50_B6BNY2 Ggdef domain protein n=2 Tax=Campylobacterales bacterium GD 1 RepID=B6BNY2_9PROT Length = 744 Score = 761 bits (1966), Expect = 0.0, Method: Composition-based stats. Identities = 158/700 (22%), Positives = 308/700 (44%), Gaps = 42/700 (6%) Query: 127 VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPD--TL 184 + +E ++ +A+ + + + + + + EM G+ E P Sbjct: 53 DKKNIEELHERIELALLGSNDGLWDWNITDDSIYFSPRWKEMLGFKDDELPNEMPSWQDR 112 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 ++ + + + + +T ++ + + G+ IW D ++ T Sbjct: 113 VHPEDLQSALDEIEKNINGETDYYENIHRIRHKNGDWIWTLDRGKVQLDENGKAVRMIGT 172 Query: 245 FSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIES------VLNESHVSLFALR- 297 DIT ++++ + + ++ +L + + Sbjct: 173 HRDITNIQEMQLKYSQQVQIIEQIHDSVISTDLNGYITSWNKGSQILLEYTEEEMLTKHV 232 Query: 298 -----NGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGIL---QIKTSSGAETSAFIE 349 + + ++ G + I +A + Sbjct: 233 SSLFLEEDHKALQEGTQELIKHGEYHADKRLVKKSGDIIFVSLSLSILKDEKGNPTALVG 292 Query: 350 RVADISQHMAALALEQEKSRQH--IEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS---- 403 DI++ A E++ Q + D +T LPNR + L+ ++KA Sbjct: 293 YCQDITKRKEA---EEKLYEQKNILHYQAHHDELTQLPNRTFFNERLEQAIEKAKRNKTL 349 Query: 404 PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLEND 463 ++ I +DH + + DSLG+ D L R + K++ + L R+ G +F L+ E + Sbjct: 350 IALFYIDLDHFKQINDSLGHEVGDIVLKITAERLKNKIRKEDTLSRLGGDEFTLIIEELN 409 Query: 464 -VSNITQIADELRNVVSKPIMIDDKPFPLT--------LSIGISYDLGKNRDYLLSTAHN 514 +++ +A ++ + KPI ID ++ D + LL A + Sbjct: 410 IAKDVSLLAQKIIEDLEKPIYIDTHTLYISSSIGISIYP------DDDTDAKNLLKYADS 463 Query: 515 AMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYG 574 AM ++ G N +QF+S M E+ E + + A+L++A+ N + + YQPQ+ T L G Sbjct: 464 AMYKAKEEGRNNFQFYSSEMTELAFEHVAMEASLRQALQNEEFVVYYQPQMDGRTDRLVG 523 Query: 575 IEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSV 634 +EAL RW+ P G V P +FIP+AE+ G I I +WV+ A Q W ++ L++ Sbjct: 524 MEALVRWNHPTLGLVQPYKFIPIAEKNGLIVQIDQWVMKSAMTQFVAWYKDGLNPGVLAM 583 Query: 635 NLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGL 694 NL+ + + +S+ + + + +E+TES +M + E K ++ + +MG+ L Sbjct: 584 NLAVKQLQKKDFIDTMSNLLKSTQCKPEWIELEVTESQIMTNPQEAIKILKQISEMGIEL 643 Query: 695 SVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAE 754 +VDDFGTG+S LS L LP+ ++KID++F+ ++ + + +++ ++ +SLNL V+AE Sbjct: 644 AVDDFGTGYSSLSYLKRLPIDKLKIDRTFIQDLPDDEEDVGITKSVIALSKSLNLKVIAE 703 Query: 755 GVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEI-PGWMSS 793 GVET EQ L + C+ IQGY +S+P+ A E+ ++ + Sbjct: 704 GVETDEQKNFLVENGCQNIQGYLYSKPITANEMKERFLKN 743 Score = 142 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 103/290 (35%), Gaps = 16/290 (5%) Query: 12 GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPE 71 AL + G N D+ ++F+P +++ G+K +E+ +P HPE Sbjct: 62 ERIELALLGSNDGLWDWNITDDSIYFSPRWKEMLGFKDDELPNE-----MPSWQDRVHPE 116 Query: 72 YIRHNREGGKARVEG----MSRELQLEKKDGSKIWTRFA--LSKVSAEGKVYYLALVRDA 125 ++ + + + G ++ K+G IWT + V + RD Sbjct: 117 DLQSALDEIEKNINGETDYYENIHRIRHKNGDWIWTLDRGKVQLDENGKAVRMIGTHRDI 176 Query: 126 SVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLL 185 + + + Q + ++ + VI D +I N+ + Y E +L Sbjct: 177 TNIQEMQLKYSQQVQIIEQIHDSVISTDLNGYITSWNKGSQILLEYTEEEMLTKHVSSLF 236 Query: 186 NIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTF 245 + A Q L K + L+ ++G+ I++ S+S + D + LV Sbjct: 237 LEEDHKALQEGT--QELIKHGEYHADKRLVKKSGDIIFVSLSLSILKDEKGNPTALVGYC 294 Query: 246 SDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFA 295 DIT+ ++ + + E+ ++ R NE Sbjct: 295 QDITKRKEAEEKLYEQKNILHYQAHHDELTQLPNRT---FFNERLEQAIE 341 >UniRef50_B7K9S9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7K9S9_CYAP7 Length = 1015 Score = 760 bits (1964), Expect = 0.0, Method: Composition-based stats. Identities = 166/714 (23%), Positives = 305/714 (42%), Gaps = 35/714 (4%) Query: 103 TRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCN 162 + SK+ + + E AQK + L +D+ + + D + + N Sbjct: 304 VQERTSKLFQAYETLAAEIEERKRAEAAQKASQKNLQTFIDNTSAAIYLKDLQGKFLLVN 363 Query: 163 RAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKI 222 R ++ G + G + A +Q+L E ++ + Sbjct: 364 RQLEKLVGLKREQMIGKTDGDVFPEDIADAFVVND-RQVLQAGESLSLEEQIIVER-QLR 421 Query: 223 WIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE------ 276 + P+YD L + +DITE +Q + + + + + Sbjct: 422 TYLSVKFPLYDPNGLLYGIGGISTDITERKQAEEALRQQANLLDLAYEAILVRDGNNVIT 481 Query: 277 IICRNIESVLNESHVSLFALRNGMPIH----WASSSHGAEIQNAQSWSATIR--QRDGAP 330 + E + + + + +S A ++ W + ++DG Sbjct: 482 FWNQGAEQLYGWKKSQALGQVSHILLQTEFNLSSPHFDAILRLTGHWEGELTHTRQDGTK 541 Query: 331 AGILQ---IKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNR 387 + + + +E DI+ E++ ++ +E D +T LPNR Sbjct: 542 IIVESRQVLVQDDRGQIKGILEVNRDIT--------ERKLAQFQLEHNALHDALTELPNR 593 Query: 388 NNLHNYLDDLVDKAVS-----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLK 442 L + + +A + I +D + + D+LG+ D L+ + R + ++ Sbjct: 594 LLLMERIQAAIQRAKRKPHYHFALLFIDLDRFKTINDTLGHLVGDHLLVAIATRLQHCVR 653 Query: 443 PDQYLCRIEGTQFVLVSLEN-DVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD- 500 + R+ G +F+++ + + S+ I + + + +P++I+++ + SIGI ++ Sbjct: 654 SGDTVARLGGDEFIILLDDLLEESDAFPITERILGRIKEPLVINNQQIQTSASIGIVFNR 713 Query: 501 LGKNRDY-LLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKL 559 G + LL A AM ++ G + + F+P M+ + L+ A+ + L Sbjct: 714 DGNESETDLLRNADLAMYSAKEQGKSRYAVFNPTMHLRAHTLWEIENNLRTALDGQEFLL 773 Query: 560 VYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQL 619 YQP T L G EAL RW P+ G + P FIP+AEE G I IG WV+ EACRQL Sbjct: 774 HYQPIFSLTTQTLVGFEALIRWRHPVRGLISPMDFIPVAEETGLIVPIGEWVLQEACRQL 833 Query: 620 AEWRSQ--NIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHD 677 W+ +S+NLS+ S + + + L +EITE+++M++ Sbjct: 834 LHWQELNPGAKCCFMSINLSSRQLESGNFIAVIDQILQQTPLSAKNLKLEITETLLMKNL 893 Query: 678 TEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALL 737 + L++ +G+S+DDFGTG+S LS L LPV +KID+SFV + + L ++ Sbjct: 894 EAASALLLELKNRAIGVSIDDFGTGYSSLSYLCHLPVDSLKIDRSFVAKMDKGRESLQVI 953 Query: 738 EAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWM 791 +AI S+ LNL V+AEG+ET++ L + C QGYF S+PL +E+ + Sbjct: 954 QAIISLAHQLNLEVIAEGIETQDHLTQLHHLKCEYGQGYFLSKPLDSEKATQLI 1007 Score = 160 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 95/264 (35%), Gaps = 11/264 (4%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 + A A+ ++ L + + + N EKL G KRE++IG + Sbjct: 327 RAEAAQKASQKNLQTFIDNTSAAIYLKDLQGKFLLVNRQLEKLVGLKREQMIGKTDGDVF 386 Query: 62 PRDLRPAHPEYIRHNREGGKARV--EGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYL 119 P D+ A R + G++ E + E QL + G +Y + Sbjct: 387 PEDIADAFVVNDRQVLQAGESLSLEEQIIVERQLRT------YLSVKFPLYDPNGLLYGI 440 Query: 120 -ALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASG 178 + D + +E RQ +D ++V D I N+ +++G+ S+A G Sbjct: 441 GGISTDITERKQAEEALRQQANLLDLAYEAILVRDGNNVITFWNQGAEQLYGWKKSQALG 500 Query: 179 MQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHL 238 LL + +L T + E + G KI +++ V D + Sbjct: 501 QVSHILLQTEF--NLSSPHFDAILRLTGHWEGELTHTRQDGTKIIVESRQVLVQDDRGQI 558 Query: 239 QNLVMTFSDITEERQIRQLEGNIL 262 + ++ DITE + + + Sbjct: 559 KGILEVNRDITERKLAQFQLEHNA 582 >UniRef50_Q1JW15 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JW15_DESAC Length = 893 Score = 760 bits (1964), Expect = 0.0, Method: Composition-based stats. Identities = 214/817 (26%), Positives = 351/817 (42%), Gaps = 59/817 (7%) Query: 10 ADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAH 69 A +++N+ ++ NP A K + E+ +G +++ IP D Sbjct: 94 ARDELEAIFNATGAAIIVLNDELQLHSCNPMAVKRFSIDAEKALGCHLEQAIP-DCHSLL 152 Query: 70 PEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEM 129 + + + + S + S + +Y + D + Sbjct: 153 SQNFLNELANCRQGRLVIEIAFHD-----SWYSLVATPVRNSNDQVSFYALIFSDITERK 207 Query: 130 AQKEQT----RQLIIAVDHLDRPVIVLDPER-HIVQCNRAFTEMFGYCISEASGMQPDTL 184 +E +L ++ + ++++DP+ IV N ++M G + G Sbjct: 208 RTEESLVEAETRLTEILNTMMAGILIIDPQTHRIVDVNHMASQMIGDPPDKIIGAICHRY 267 Query: 185 LNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 + L Q++ + R L+ GE+I I + + + L ++ + Sbjct: 268 ICPSSSGQCPLTDLNQVIDNSDRV-----LINNRGEEIPILKTATII--ELNGKAFILES 320 Query: 245 FSDITEERQIRQLEGNILA-------AMCSSPPF------------HEMGEIICRNIESV 285 F DI + Q AM + + R + Sbjct: 321 FIDIQARKLAEQALRESEQRYRSLYTAMREGVAIGELVYDAHGVACDYILHDVNRAFSEM 380 Query: 286 LNESHVSLFALRNGM--PIHWASSSHGAEIQNAQ-SWSATIRQRDGAPAGILQIKTSSGA 342 L + L R E+ + D + + Sbjct: 381 LGVASEELVGHRASEFYHGAPPYIHILDEVVKYGIPKEYELPLSDLEKVFHVSVSRPEKE 440 Query: 343 ETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV 402 F + D++ + +K++Q IE+L +D +TGLPNR + + L V +A Sbjct: 441 R---FACIINDVT--------DSKKAQQEIERLAYYDTLTGLPNRVLIKDRLQQAVAQAQ 489 Query: 403 S----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLV 458 V + +DH + + DSLG DQ L V R + L+ + R+ G +FV++ Sbjct: 490 RSRALVGVLALDLDHFKKINDSLGIGCGDQMLKLVSQRLKGHLRQGDSVARMGGDEFVIL 549 Query: 459 SL-ENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNA 515 ++I A ++ +++++P+ ID T S+GIS D LL A A Sbjct: 550 ITGIKSQNDIVTAAGKILDLLAEPVTIDGHDLVSTGSLGISVYPTDADEVDLLLKHADTA 609 Query: 516 MDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGI 575 M ++ G N +QF+SP MNE ERL L + L A++ N+L+L +QPQI G + G Sbjct: 610 MYQAKETGRNLYQFYSPDMNERAFERLFLDSDLHRALARNELELYFQPQIDLAQGHVVGA 669 Query: 576 EALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVN 635 EAL RW+ G + P FIPLAEE I +IG WVI EACR +W Q ++VN Sbjct: 670 EALLRWNHATKGQISPVVFIPLAEESDLILDIGGWVIEEACRHARQWHDQGYTDLRVAVN 729 Query: 636 LSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLS 695 LSA FR + LP+ V+ +H G+ H L +E+TES++ME + LR +G LS Sbjct: 730 LSARQFR-SDLPDIVARVLHETGLPAHLLELELTESLLMERPELARTILNKLRYLGNHLS 788 Query: 696 VDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEG 755 +DDFGTG+S LS L P+ +KID+SFV + ++EAI ++ L L VVAEG Sbjct: 789 IDDFGTGYSSLSYLKHFPIDRLKIDRSFVKDLNVDPDDAIIVEAIIALAHGLRLNVVAEG 848 Query: 756 VETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 VET +QFE +R+ C IQGY +RP+PA++ ++ Sbjct: 849 VETSDQFEFMRQRGCDEIQGYVVARPMPADDFLRYLQ 885 Score = 97.4 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 85/273 (31%), Gaps = 33/273 (12%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINEN-DEVMFFNPAAEKLWGYKREEVIGNNIDML 60 + ++ A+ L M G ++I+ ++ N A ++ G +++IG Sbjct: 208 RTEESLVEAETRLTEILNTMMAGILIIDPQTHRIVDVNHMASQMIGDPPDKIIGAICHRY 267 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA 120 I P ++ R L + G +I + + GK + L Sbjct: 268 ICPSSSGQCP------LTDLNQVIDNSDRVLINNR--GEEIPILKTATIIELNGKAFILE 319 Query: 121 LVRDASVEM----AQKEQTRQLIIAVDHLDRPV----IVLDPERH----IVQ-CNRAFTE 167 D A +E ++ + V +V D I+ NRAF+E Sbjct: 320 SFIDIQARKLAEQALRESEQRYRSLYTAMREGVAIGELVYDAHGVACDYILHDVNRAFSE 379 Query: 168 MFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKAS 227 M G E G + + L +++ + E L + + S Sbjct: 380 MLGVASEELVGHRASEFYHG---APPYIHILDEVVKYGIPKEYELPLSDLE-KVFHVSVS 435 Query: 228 ISPVYDVLAHLQNLVMTFSDITEERQIRQLEGN 260 + +D+T+ ++ +Q Sbjct: 436 -------RPEKERFACIINDVTDSKKAQQEIER 461 Score = 70.4 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 23/178 (12%), Positives = 58/178 (32%), Gaps = 23/178 (12%) Query: 4 TDADNAADGIFFPALEQNMMGAVL----INENDE-----VMFFNPAAEKLWGYKREEVIG 54 A ++ + G + + + + N A ++ G EE++G Sbjct: 331 EQALRESEQRYRSLYTAMREGVAIGELVYDAHGVACDYILHDVNRAFSEMLGVASEELVG 390 Query: 55 NNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEG 114 + H + G+ +E +L D K++ ++S+ E Sbjct: 391 HRASEFYHGAPPYIHILD--------EVVKYGIPKEYELPLSDLEKVF-HVSVSRPEKE- 440 Query: 115 KVYYLALVRDASVEMAQKEQTRQL--IIAVDHLDRPVIVLDPERHIVQCNRAFTEMFG 170 + ++ D + +++ +L + L V++ D + V + + G Sbjct: 441 --RFACIINDVTDSKKAQQEIERLAYYDTLTGLPNRVLIKDRLQQAVAQAQRSRALVG 496 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 760 bits (1964), Expect = 0.0, Method: Composition-based stats. Identities = 177/632 (28%), Positives = 293/632 (46%), Gaps = 39/632 (6%) Query: 187 IPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFS 246 P D+ I L + + Q E + I+ + + D+ H Sbjct: 127 HPILEKDHTIALFYMESEQELYQLEQAVQELDTVWIFSSLLVRQIIDMWHH--------E 178 Query: 247 DITEERQIRQL-----EGNILAAMCSSPPFHEMGEIICRNIES--------------VLN 287 + +E ++ + E + A + SP + ++ + + + Sbjct: 179 EQSERHRLAEQALWASETYLNAILHYSPALISVKDLDGNVVLASDHFKHMADIDESGFVG 238 Query: 288 ESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAF 347 ++ +F R+ W Q + +DG+ L +K + Sbjct: 239 KNVFDVF-PRDIAQSMWDIDIATKTNQQTYEVELDLMHKDGSLHTYLMVKFPLRGKEGKV 297 Query: 348 IERVA---DISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVS- 403 DIS+ A +E+ + + + D +T LPNR+ ++ + + +A Sbjct: 298 FGVCTIGTDISERKLAENALREQ-QSRLNYMAFHDALTSLPNRSLFYDRIYHGLARARRS 356 Query: 404 ---PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSL 460 + L+ +D + V DSLG+ D L + R E ++ + R+ G +FV+V Sbjct: 357 NSRVALMLLDIDRFKIVNDSLGHDAGDILLKAIAMRLTEGVRDMDTVARLGGDEFVVVLE 416 Query: 461 -ENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNAMD 517 +DV ++ +A++L +S+P+ I T+SIG+S G + D LL A AM Sbjct: 417 GIHDVDDVIFVANKLLATLSRPLDISGHSISATVSIGVSIFPEDGADTDELLKNADIAMY 476 Query: 518 YIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEA 577 ++ G N QF++ MN L+L L+ AI NQL L YQPQI +TG++ G+EA Sbjct: 477 KAKEAGKNNCQFYTKGMNATAVNYLLLENDLRRAIEQNQLALYYQPQIDLKTGDMTGVEA 536 Query: 578 LARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLS 637 L RW P G V P+ FIPLAEE G I IG WV+ EAC+Q W ++ ++VNLS Sbjct: 537 LVRWQHPERGLVSPAHFIPLAEETGLIVPIGEWVLREACKQKKIWLDTGKNVGKVAVNLS 596 Query: 638 ALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVD 697 FR P +V + G++ L +EITES MEH E ++ L MG L++D Sbjct: 597 PRQFRQKNFPGKVEAILQETGLEAKYLELEITESCAMEHAGETINQLNQLNQMGTFLAID 656 Query: 698 DFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVE 757 DFGTG+S L+ L P+ ++KID+SF+ + A+ + I + ++ L VVAEGVE Sbjct: 657 DFGTGYSSLAYLQRFPIQKLKIDRSFIHDIHDDANDAAIAKTIIGLAHNMQLRVVAEGVE 716 Query: 758 TKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPG 789 T+ Q E LR C +QG+ +++P+ A+++ Sbjct: 717 TESQAEWLRAKGCDQVQGFLYAKPMTAKQLES 748 Score = 81.2 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 19/159 (11%), Positives = 42/159 (26%), Gaps = 1/159 (0%) Query: 123 RDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPD 182 R E A L + + + V D + ++V + F M S G Sbjct: 183 RHRLAEQALWASETYLNAILHYSPALISVKDLDGNVVLASDHFKHMADIDESGFVGKNVF 242 Query: 183 TLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 + + + E L+ + G P+ + + Sbjct: 243 DVF-PRDIAQSMWDIDIATKTNQQTYEVELDLMHKDGSLHTYLMVKFPLRGKEGKVFGVC 301 Query: 243 MTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRN 281 +DI+E + + + + + R+ Sbjct: 302 TIGTDISERKLAENALREQQSRLNYMAFHDALTSLPNRS 340 Score = 73.5 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 53/159 (33%), Gaps = 6/159 (3%) Query: 4 TDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPR 63 A A++ L + + + + V+ + + + +G N+ + PR Sbjct: 188 EQALWASETYLNAILHYSPALISVKDLDGNVVLASDHFKHMADIDESGFVGKNVFDVFPR 247 Query: 64 DLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSA-EGKVYYLA-L 121 D+ + + K + EL L KDGS + EGKV+ + + Sbjct: 248 DIAQSMWD----IDIATKTNQQTYEVELDLMHKDGSLHTYLMVKFPLRGKEGKVFGVCTI 303 Query: 122 VRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQ 160 D S + R+ ++++ + + Sbjct: 304 GTDISERKLAENALREQQSRLNYMAFHDALTSLPNRSLF 342 >UniRef50_A0LD38 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD38_MAGSM Length = 834 Score = 759 bits (1961), Expect = 0.0, Method: Composition-based stats. Identities = 181/826 (21%), Positives = 330/826 (39%), Gaps = 95/826 (11%) Query: 1 MKLTDADNAAD---GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNI 57 ++L A + F G +LI+ + V+ N ++ G KRE++I Sbjct: 58 LRLEKAKQVQESALARFEALFNSAPEGFILIDVSGMVLECNHTTLEMLGCKREDLIRKPF 117 Query: 58 DMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVY 117 + + +P + + E++L K S + + Sbjct: 118 SAFVHIEDQPKFYASYPSFFKSTYPK----PIEIRLIHK----------GSAFKHKDHSF 163 Query: 118 YLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEAS 177 L ++++ + + + + Sbjct: 164 IAELTGCSTLKQDLFKDLYH-----------------DNPFILVS-------------IY 193 Query: 178 GMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 + LL A L + D+ E + + + Sbjct: 194 NINAHKLLERELADAKQAAELANHALLESHDKLEAT----------VAQRTAALKTSNEQ 243 Query: 238 LQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIE------SVLNESHV 291 L+ + E Q + ++ + + R +E + Sbjct: 244 LK------QQMIEREQAQHRLRLTAGVFENTSEAIIITDAANRVMEVNPAFVRITGYPAD 297 Query: 292 SLFALRNG-----MPIHWASSSHGAEIQNAQSWSATI--RQRDGAPAG---ILQIKTSSG 341 + G H + +I W I R+ +G + Sbjct: 298 EVIGRDPGFMKSHRHTHEFYAEMWKKIWQTGQWQGEIWDRRHNGEIYPKWLTINAVYDER 357 Query: 342 AETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKA 401 I +DIS+ + + + +EQL FD +T LPNR + + LD + A Sbjct: 358 GHLVNCIGIFSDISR--------LKATEERLEQLAFFDCLTKLPNRAHFQSRLDHALTAA 409 Query: 402 VS----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVL 457 + I +DH + + DS+G+ DQ L+E R + ++ + + R+ G +F + Sbjct: 410 NRRQNKVGLIFIDLDHFKHINDSMGHNAGDQLLIEAAKRIQSCVREEDTVARMGGDEFTI 469 Query: 458 VSLE-NDVSNI-TQIADELRNVVSKPIMIDDKPFPLTLSIGISY--DLGKNRDYLLSTAH 513 + + D + + T +A + + PI+++DK + S+G++ D N L+ A Sbjct: 470 ILADLTDTAKVMTNVALTILESFTHPIVLEDKKLFIGCSLGMAIYPDDSGNAALLIKHAD 529 Query: 514 NAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELY 573 AM +++G N + F++ MN + R+ L + L+ AI + +L YQP++ A + E+ Sbjct: 530 TAMYRAKESGRNRYSFYTAEMNAQAQSRISLESELRYAIDHKAFELYYQPKVDAHSSEIV 589 Query: 574 GIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALS 633 G EAL RW P G + P++FIP+AEE G I IG V+ AC+ L ++ Sbjct: 590 GFEALLRWIHPTEGVISPNQFIPIAEESGLIAAIGNQVVEMACQGLQRINRCTPKPLPVA 649 Query: 634 VNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVG 693 +NLS R + L N S + +GI+ QL +E+TES + + + +Q L +G Sbjct: 650 INLSVRQLRQDNLVNYFSQTLANYGIEAEQLELEVTESFLAKPIEKSAALLQALHQLGYK 709 Query: 694 LSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVA 753 +++DDFGTG+S LS L + P+ +KID+SFV + +++AI S+ +L +VA Sbjct: 710 IAIDDFGTGYSSLSYLKNFPIHTLKIDRSFVMEVAHNQESRTIVQAIISMAHALGYDLVA 769 Query: 754 EGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI 799 EGVET Q +L+ + C ++QG+ ++RP P EI +S L I Sbjct: 770 EGVETAAQVNVLQGLGCGIMQGFHYARPAPLHEILEILSLGSTLAI 815 >UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACK6_ALHEH Length = 857 Score = 759 bits (1961), Expect = 0.0, Method: Composition-based stats. Identities = 222/852 (26%), Positives = 348/852 (40%), Gaps = 90/852 (10%) Query: 14 FFPALEQNMMGAVLINEND---EVMFFNPAAEKLWGYKREEVIGNN--IDMLIPRDLRPA 68 LE + + + ++ + E+L GY + + + + D R Sbjct: 21 LHRVLEASPAVTYALTRDGQSLRPVYISAHIEELLGYPVADWMADPQFWRQCLHPDDRER 80 Query: 69 HPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALS--KVSAEGKVYYLALVRDAS 126 + G E ++ +DGS W L + + +D + Sbjct: 81 VLAQSARHLPEGLV-----DHEYRVRHRDGSYRWVHDRLRLMPARDGRPAMAVGVWQDIT 135 Query: 127 VEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLN 186 R L + RH+ + + G E G P + + Sbjct: 136 HRARADRLLRTLSHLTARVTGDDFFRTLVRHLAEALDMRYVLLG----ELPGHPPTRV-H 190 Query: 187 IPEFPADNRIR-----------LQQLLWKTARDQD--------EFLLLTRTGEKIWIKAS 227 AD IR ++L E LL E Sbjct: 191 TRALYADGAIRPNVTYPLAGTPCARVLSDEPCHYANDVCRDFPEDELLR---EMAVESYF 247 Query: 228 ISPVYDVLAHLQNLVMTFSD------ITEE----------------RQIRQLEGNILAAM 265 P+ + L+ D TE Q + I Sbjct: 248 GVPIRRADGTITGLLALMHDQPREISATERAVIALFAARAGTELARHQAEEQLQLIDQVF 307 Query: 266 CSSPPFHEMGEI------ICRNIESVLNESHVSLFA-----LRNGMPIHWASSSHGAEIQ 314 S + + + E++ L L++G ++ Sbjct: 308 EGSRDAIIITDAQTRILQVNPAFEAISGYREEELVGRTPRLLQSGHQGPRFYREMWEALK 367 Query: 315 NAQSWSATI--RQRDGAPAGIL---QIKTSSGAETSAFIERVADISQHMAALALEQEKSR 369 + W + R+ DG L T+ E + +I +DI+ H + + Sbjct: 368 SRGHWQGELWNRRADGETYPSLLSVSAVTNDNDEVTHYIGIASDITSH--------KAAE 419 Query: 370 QHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV---SPVVYLIGVDHIQDVIDSLGYAWA 426 QHI+ L +D +TGL NR L L+ ++ A ++ + +D +++ D+LG+ Sbjct: 420 QHIDYLAHYDTLTGLGNRRLLEEELERMLRNARGGRPFALFFLDLDRFKNINDTLGHESG 479 Query: 427 DQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDD 486 D+ L EV +R R+ P LCRI G +F +++ IA +L +S+P I + Sbjct: 480 DRLLEEVADRLRDLAGPQATLCRIGGDEFAILAPGLSHRQTAGIARQLVEGISRPYEITE 539 Query: 487 KPFPLTLSIGISYD--LGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVL 544 +P +T S+G++ G R+ L+S A A+ Y++ +G N +QF P M ERL L Sbjct: 540 RPLVVTCSVGVAVHPRDGTRREALISAADTALHYVKAHGSNHYQFHEPGMTAAAAERLHL 599 Query: 545 GAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEI 604 L+EA+ + +L YQP + E + G EAL RWH P G +PP RFIPLAEE G I Sbjct: 600 ENDLREALLRGEFELYYQPVLDTERLTVCGAEALLRWHHPEAGLIPPDRFIPLAEETGLI 659 Query: 605 ENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQL 664 IG WV+ EAC Q A WR + +SVN+S F ++LP V A+ A + L Sbjct: 660 RPIGTWVLREACAQAARWRRLGLTGMTVSVNVSGEQFWRDELPQAVRQALEAQALAPDAL 719 Query: 665 TVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFV 724 +EITES++M R++ L+ MGVGLS+DDFGTG+S LS L P+ +KIDKSFV Sbjct: 720 VLEITESVLMHGSANTETRLRELKAMGVGLSLDDFGTGYSSLSYLKRFPIDTLKIDKSFV 779 Query: 725 DRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPA 784 + ++ L + + ++G L L VVAEGVE+ E +LR+ C +QGY FSRPLPA Sbjct: 780 RDMVRDEHDRTLAQTVIAMGHGLGLQVVAEGVESAEHLPLLRRARCDRVQGYHFSRPLPA 839 Query: 785 EEIPGWMSSVLP 796 + W+ Sbjct: 840 RALSRWIQQHQC 851 Score = 112 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 51/140 (36%), Gaps = 9/140 (6%) Query: 6 ADNAADGIFF---PALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIP 62 A + A+ E + ++ + ++ NPA E + GY+ EE++G +L Sbjct: 292 ARHQAEEQLQLIDQVFEGSRDAIIITDAQTRILQVNPAFEAISGYREEELVGRTPRLLQS 351 Query: 63 RDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEG--KVYYLA 120 P + + EL + DG + ++S V+ + +Y+ Sbjct: 352 GHQGPRFYREMWEALKS----RGHWQGELWNRRADGETYPSLLSVSAVTNDNDEVTHYIG 407 Query: 121 LVRDASVEMAQKEQTRQLII 140 + D + A ++ L Sbjct: 408 IASDITSHKAAEQHIDYLAH 427 >UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=C7QU83_CYAP0 Length = 1514 Score = 759 bits (1960), Expect = 0.0, Method: Composition-based stats. Identities = 192/817 (23%), Positives = 347/817 (42%), Gaps = 93/817 (11%) Query: 52 VIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVS 111 + + + P R E ++ + + + K S + Sbjct: 707 ALLQQLRSSLSTQDLPIILLSARAGEESRIEGLQAKADDYLI--KPFSSRELLARVEACL 764 Query: 112 AEGKVYYLALVRDASVEMAQKEQTR-------QLIIAVDHLDRPVIVLDPERHIVQCNRA 164 ++ A R+ ++ +A ++ + +L + + I+LDPE I N A Sbjct: 765 KMAQIRQEAAAREQTLRLATEKAQQAVAATTEKLNRILATISDGFILLDPEWVITYHNTA 824 Query: 165 FTEMFGYCISEA-SGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIW 223 T++F G + D RL+ + + Q E+ + E++W Sbjct: 825 TTKLFPAKSHPLGLGKTLWEVWPS-WVNTDLEHRLRYAMTEQVSQQCEYHCASSLTEELW 883 Query: 224 IKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCS---------------- 267 ++ + L + DI++ ++ A+ Sbjct: 884 LEIYAYSFEEGLG------IFLHDISDRKRSEAERHKAEIALKQYSEQLELRVAERTAKL 937 Query: 268 -------------------------SPPFHEMGEIICRNIESVLNESHVSLFALRNGMPI 302 + E + + +E ++ ++ G Sbjct: 938 SQTIAELHQVEEILRGKETHYRQALNLTNTGSWEFDLASEKVFWSEQVEIIWGMKPGTFR 997 Query: 303 HWA----SSSHGAE-----------IQNAQSWSATIR--QRDGAPAGILQI---KTSSGA 342 + H + I+ + + R DG+ + I + S Sbjct: 998 GEFDQVKAGIHPQDFDLWQQNVQACIEEGKEHNLEFRVVHPDGSIHWVQAIGNAEYDSQG 1057 Query: 343 ETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAV 402 + D++ E++ S++ + + D +T LPNR L LD + +A Sbjct: 1058 HPIRLRGLIMDVT--------ERKTSQERLNYMAHHDHLTDLPNRLLLKARLDQSIQQAT 1109 Query: 403 S----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFV-L 457 V I +D + + DS+G+A D L ++ R R+ L+ + RI G +FV + Sbjct: 1110 RKRTKLAVVFIDLDRFKHINDSMGHAAGDALLQQLAQRLRQVLRSSDTVARISGDEFVAV 1169 Query: 458 VSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYD--LGKNRDYLLSTAHNA 515 + D+ + + + +L V +P ++ + +T S+G+S G + LL A +A Sbjct: 1170 LEDIEDIQHASMVVAKLMTVFEEPFPLEGQIIHMTSSMGLSLFPDDGMDTAILLRNADSA 1229 Query: 516 MDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGI 575 M ++ G N + F++ M E ++ AL+ A+ N+ LVYQPQI + G+ Sbjct: 1230 MYRAKEEGRNTYCFYAEEMTSAAFEYVLFENALRGALKRNEFYLVYQPQIDLSSHRWVGM 1289 Query: 576 EALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVN 635 E L RWH P G V P++FIP+AE+ G I+ IG WV+ AC Q W Q I ++VN Sbjct: 1290 EVLLRWHHPELGIVSPAQFIPIAEQSGLIQEIGTWVLYRACCQAKTWLDQGIDFGHIAVN 1349 Query: 636 LSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLS 695 ++A + N + V DA+ + G+ L +E+TE ++M + K++++L+DMG+ L+ Sbjct: 1350 VAAPQIQQNNFVHLVQDALDSSGLPSPHLELELTEGLVMHQTEDRIKQLEVLQDMGIYLA 1409 Query: 696 VDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEG 755 +DDFGTG+S LS L LP+ ++KIDKSFV + +A+ EA+ ++G++LNL ++AEG Sbjct: 1410 IDDFGTGYSSLSYLKRLPINKLKIDKSFVRDIPHDTNDMAISEAVIALGKALNLRIIAEG 1469 Query: 756 VETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS 792 VE + Q LR+ C QGY +S+PLP EEI + Sbjct: 1470 VEQEIQATFLREKGCHEAQGYLYSKPLPPEEITQLFA 1506 Score = 97.0 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 94/302 (31%), Gaps = 41/302 (13%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEV-IGNNIDML 60 K A A L G +L++ + + N A KL+ K + +G + + Sbjct: 786 KAQQAVAATTEKLNRILATISDGFILLDPEWVITYHNTATTKLFPAKSHPLGLGKTLWEV 845 Query: 61 IPRDLRPAHPEYIRHNREGGKARVEGMSR------ELQL--------------------- 93 P + +R+ ++ EL L Sbjct: 846 WPSWVNTDLEHRLRYAMTEQVSQQCEYHCASSLTEELWLEIYAYSFEEGLGIFLHDISDR 905 Query: 94 EKKDGSKIWTRFALSKVSAEGKVYYLA----LVRDASVEMAQKEQTR----QLIIAVDHL 145 ++ + + AL + S + ++ L + + +E R A++ Sbjct: 906 KRSEAERHKAEIALKQYSEQLELRVAERTAKLSQTIAELHQVEEILRGKETHYRQALNLT 965 Query: 146 DRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTL---LNIPEFPADNRIRLQQLL 202 + D V + ++G G + D + ++ +F + +Q + Sbjct: 966 NTGSWEFDLASEKVFWSEQVEIIWGMKPGTFRG-EFDQVKAGIHPQDFD-LWQQNVQACI 1023 Query: 203 WKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNIL 262 + EF ++ G W++A + YD H L D+TE + ++ + Sbjct: 1024 EEGKEHNLEFRVVHPDGSIHWVQAIGNAEYDSQGHPIRLRGLIMDVTERKTSQERLNYMA 1083 Query: 263 AA 264 Sbjct: 1084 HH 1085 Score = 74.6 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 32/268 (11%), Positives = 81/268 (30%), Gaps = 23/268 (8%) Query: 2 KLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLI 61 ++ + + + AL G+ + E +F++ E +WG K G + Sbjct: 946 QVEEILRGKETHYRQALNLTNTGSWEFDLASEKVFWSEQVEIIWGMKPGTFRGE--FDQV 1003 Query: 62 PRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSK--VSAEGKVYYL 119 + P + + N + + + E ++ DGS W + + S + Sbjct: 1004 KAGIHPQDFDLWQQNVQACIEEGKEHNLEFRVVHPDGSIHWVQAIGNAEYDSQGHPIRLR 1063 Query: 120 ALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGM 179 L+ D + +E+ ++++ + D ++ I +A+ Sbjct: 1064 GLIMDVTERKTSQER-------LNYMAHHDHLTDLPNRLL-----LKARLDQSIQQATRK 1111 Query: 180 QPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQ 239 + + + R + + + LL + S V + Sbjct: 1112 RTKLAVVFIDLD-----RFKHINDSMGHAAGDALLQQLAQRLRQVLRSSDTVARISGDE- 1165 Query: 240 NLVMTFSDITEERQIRQLEGNILAAMCS 267 V DI + + + ++ Sbjct: 1166 -FVAVLEDIEDIQHASMVVAKLMTVFEE 1192 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.184 0.667 Lambda K H 0.267 0.0565 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,482,046,108 Number of Sequences: 3077464 Number of extensions: 449163429 Number of successful extensions: 1204607 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 34301 Number of HSP's successfully gapped in prelim test: 11133 Number of HSP's that attempted gapping in prelim test: 959346 Number of HSP's gapped (non-prelim): 108365 length of query: 799 length of database: 1,040,396,356 effective HSP length: 137 effective length of query: 662 effective length of database: 618,783,788 effective search space: 409634867656 effective search space used: 409634867656 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 99 (42.3 bits)