19/01/2012 04:44:06 : INFO  : Run start: Thu Jan 19 04:44:04 GMT 2012
19/01/2012 04:44:14 : INFO  : Initialised job
19/01/2012 04:44:16 : INFO  : Renaming log file 'phyre2_20120119_044403.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/ce278ba12cba2769/phyre_20120119_044403.log'
19/01/2012 04:44:18 : INFO  : Initialised job:
Sequence
>batch____
MKHYSIQPANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLGGNQLEVRFPEHPHPLF
VVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPEL
APWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGF
APAKNPDMWTQNLFNAMARLARPGGTLATFTSAGFVRRGLQDAGFTMQKRKGFGRKREML
CGVMEQTLPLPCSAPWFNRTGSSKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPA
LGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPVKFDHDWCGVTQLGWDEKS
QHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQ
QQGLQIYYQYQLQNLSRKDDCWLLNFAGDQQATHSVVVLANGHQISRFSQTSTLPVYSVA
GQVSHIPTTPELAELKQVLCYDGYLTPQNPANQHHCIGASYHRGSEDTAYSEDDQQQNRQ
RLIDCFPQAQWAKEVDVSDKEARCGVRCATRDHLPMVGNVPDYEATLVEYASLAEQKDEA
VSAPVFDDLFMFAALGSRGLCSAPLCAEILAAQMSDEPIPMDASTLAALNPNRLWVRKLL
KGKAVKAG

19/01/2012 04:44:20 : INFO  : Checked sequence
19/01/2012 04:44:26 : INFO  : Finding homologues with PSI-BLAST
19/01/2012 04:44:28 : INFO  : PSI-BLAST 3 iterations
19/01/2012 04:48:20 : INFO  : PSI-BLAST 5 iterations
19/01/2012 04:54:07 : INFO  : Finished PSI-BLAST
19/01/2012 04:54:10 : INFO  : Running Buildali to generate a3m file
19/01/2012 05:41:16 : INFO  : Converting to HMM
19/01/2012 05:41:42 : INFO  : Calibrating HMM
19/01/2012 05:42:10 : INFO  : Searching HMM database
19/01/2012 05:55:47 : INFO  : Finished buildali
19/01/2012 05:55:49 : INFO  : Predicting secondary structure
19/01/2012 05:56:01 : INFO  : Predicted secondary structure (PSI-Pred)
19/01/2012 05:56:03 : INFO  : Predicting Disordered regions
19/01/2012 05:56:08 : INFO  : Predicted Disorder (Disopred)
19/01/2012 05:56:11 : INFO  : Running memsat_svm check
19/01/2012 05:58:57 : INFO  : Globular protein
19/01/2012 05:58:58 : INFO  : Predicted Transmembrane (memsat_svm) ID 'ce278ba12cba2769'
19/01/2012 05:59:00 : INFO  : Initialising fold library search
19/01/2012 05:59:05 : INFO  : Initialised search input
19/01/2012 05:59:08 : INFO  : Building Ensemble models
19/01/2012 05:59:13 : INFO  : Building hh.c3ps9A_.model.1.pdb
19/01/2012 05:59:35 : INFO  : Building c3ps9A_.1.pdb
19/01/2012 05:59:59 : INFO  : Building c3pvcA_.2.pdb
19/01/2012 06:00:20 : INFO  : Building c2qy6A_.3.pdb
19/01/2012 06:00:41 : INFO  : Building c2e58D_.4.pdb
19/01/2012 06:01:00 : INFO  : Building c1pj6A_.5.pdb
19/01/2012 06:01:21 : INFO  : Building c2gahB_.6.pdb
19/01/2012 06:01:43 : INFO  : Building c1y56B_.7.pdb
19/01/2012 06:02:01 : INFO  : Building c3djeA_.8.pdb
19/01/2012 06:02:20 : INFO  : Building c3bhkA_.9.pdb
19/01/2012 06:02:37 : INFO  : Building c2uzzD_.10.pdb
19/01/2012 06:02:55 : INFO  : Building c3nyeA_.11.pdb
19/01/2012 06:03:14 : INFO  : Building c3dmeB_.12.pdb
19/01/2012 06:03:35 : INFO  : Building c2olnA_.13.pdb
19/01/2012 06:03:54 : INFO  : Building c1ryiB_.14.pdb
19/01/2012 06:04:14 : INFO  : Building c1c0iA_.15.pdb
19/01/2012 06:04:33 : INFO  : Building c1kifE_.16.pdb
19/01/2012 06:04:53 : INFO  : Building c2r4jA_.17.pdb
19/01/2012 06:05:13 : INFO  : Building c2rgoA_.18.pdb
19/01/2012 06:05:32 : INFO  : Building c2rghA_.19.pdb
19/01/2012 06:05:54 : INFO  : Building d2gf3a1.20.pdb
19/01/2012 06:06:44 : INFO  : Finished HH model building
19/01/2012 06:06:46 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
19/01/2012 06:07:41 : INFO  : html domain output complete ID 'ce278ba12cba2769'
19/01/2012 09:02:13 : INFO  : Run end  : Thu Jan 19 09:02:11 GMT 2012
