66 c1gndA_ Probab=99.36   E-value=4e-11  Score=90.87  Aligned_columns=204  Identities=17%

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCH----------------------------------
Q ss_conf             7798289999718999999999988986999957986325455320----------------------------------
Q batch____       262 SSKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNR----------------------------------  307 (668)
Q Consensus       262 ~~~~~VvVIGAGIaGls~A~~La~rG~~VtVlE~~~~~~~gASg~~----------------------------------  307 (668)
                      +...||||||+|++|+++|+.|+++|++|+|||+.+.+|+.++...                                  
T Consensus         2 ~~~yDVvIiG~G~~Gl~~A~~La~~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~p~~~   81 (430)
T c1gndA_           2 DEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFL   81 (430)
T ss_dssp             CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCCSCCCGGGCCGGGCCEESSCCBE
T ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEE
T ss_conf             67532899979789999999999889819999678798710387752782340155204552222433464301254333


Q ss_pred             -------------------------------HHEEECCCCCCCCHHH-----HHHHHHHHHHHHHHHHCCCCCCEEECC-
Q ss_conf             -------------------------------4302043688889899-----999999999999998729766655337-
Q batch____       308 -------------------------------QGALYPLLSKHDEALN-----RFFSNAFTFARRFYDQLPVKFDHDWCG-  350 (668)
Q Consensus       308 -------------------------------aG~l~p~l~~~~~~~~-----rl~~~a~~~~~~l~~~l~~~~~~~~~G-  350 (668)
                                                     .|.+..-.........     ......+.....+.............. 
T Consensus        82 ~~~~~~~~~l~~~~~~~y~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~l~~~ek~~~~~~~~~~~~~~~~~~~~~~~~  161 (430)
T c1gndA_          82 MANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGV  161 (430)
T ss_dssp             ETTSHHHHHHHHHTGGGSCCEEECCEEEEEETTEEEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHHCCTTCGGGSCSC
T ss_pred             CCCCCHHHCCCCCCCCCEEEECCCCCCEECCCCCCHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf             05763010000277200014214564302248500011169787731347680222321238999874101210012220


Q ss_pred             ----------EEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHH-----HHHCCCCCCCCEEEECCCCCCCHHHHHHHH
Q ss_conf             ----------79981899999999999976987651142798885-----665488755556883352323669999877
Q batch____       351 ----------VTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAV-----EQITGVATNCSGITYPQGGWLCPAELTRNV  415 (668)
Q Consensus       351 ----------~l~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gl~~p~~g~i~p~~l~~al  415 (668)
                                .-....++.....+.....................     .-..-......+..+|.+|.   ..+.+++
T Consensus       162 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~p~gG~---~~l~q~~  238 (430)
T c1gndA_         162 DPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARYGKSPYLYPLYGL---GELPQGF  238 (430)
T ss_dssp             CTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHTCCGGGCCSEEEETTCT---THHHHHH
T ss_pred             HHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCH---HHHHHHH
T ss_conf             0103978899988089999999999898850577767653799999999997400366778537636975---8999999


Q ss_pred             HHHHHHCCCEEEEEEEECCCCCCCCEEEEEECCEEEEECCCHHHCCCCCHHHH
Q ss_conf             88888569479654310232105835887611013661142011157221343
Q batch____       416 LELAQQQGLQIYYQYQLQNLSRKDDCWLLNFAGDQQATHSVVVLANGHQISRF  468 (668)
Q Consensus       416 ~~~~~~~g~~i~~~~~v~~i~~~~~~~~~~~~~~~~~~ad~VV~AaG~~a~~L  468 (668)
                      ++.+...|.++..++.|..+..+++.+..+..++..+.+++||.+++.-....
T Consensus       239 ~r~~~~~Gg~i~l~~~V~~I~~~~~~v~~V~~~G~~i~a~~VI~~~~~~p~~~  291 (430)
T c1gndA_         239 ARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPDRV  291 (430)
T ss_dssp             HHHHHHHTCEEESSCCCCEECCBTTBCCCEEETTEEEBCSEEEECGGGCGGGE
T ss_pred             HHHHHHCCCEEEEECEEEEEEEECCEEEEEEECCEEEECCEEEECCCCCCHHC
T ss_conf             99986456559970221179997896999982790898689998711157000