BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (240 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P07026 Regulatory protein sdiA n=104 Tax=Enterobacteria... 504 e-141 UniRef50_Q5EM19 ExpR n=2 Tax=Erwinia RepID=Q5EM19_ERWAM 229 8e-59 UniRef50_C8QEN4 Transcriptional regulator, LuxR family n=1 Tax=P... 224 2e-57 UniRef50_D2TD82 DNA-binding transcriptional activator SdiA n=2 T... 223 5e-57 UniRef50_P54292 Regulatory protein rhlR n=12 Tax=Bacteria RepID=... 179 8e-44 UniRef50_B5EJV5 Transcriptional regulator, LuxR family n=4 Tax=A... 157 2e-37 UniRef50_Q2SXK0 Autoinducer-binding transcriptional regulator, L... 144 2e-33 UniRef50_C5D054 Transcriptional regulator, LuxR family n=1 Tax=V... 144 2e-33 UniRef50_UPI00016A4E80 probable transcriptional activator of quo... 142 8e-33 UniRef50_P58590 Transcriptional activator protein solR n=8 Tax=B... 138 2e-31 UniRef50_Q51786 Transcriptional activator protein phzR n=6 Tax=P... 136 5e-31 UniRef50_A1KWS2 Quorum sensing LuxR family sensor regulator n=3 ... 134 2e-30 UniRef50_Q0B318 Transcriptional regulator, LuxR family n=3 Tax=B... 134 3e-30 UniRef50_A0MSL2 Transcriptional regulator n=8 Tax=Burkholderia c... 129 1e-28 UniRef50_A4JSV0 Transcriptional regulator, LuxR family n=2 Tax=B... 127 3e-28 UniRef50_A9JPW9 PmrR protein n=1 Tax=Pseudomonas sp. RW10S2 RepI... 127 3e-28 UniRef50_B7VAX6 Quorum-sensing control repressor n=7 Tax=Pseudom... 125 2e-27 UniRef50_B1Z3D8 Transcriptional regulator, LuxR family n=4 Tax=B... 124 2e-27 UniRef50_D0KZC8 Transcriptional regulator, LuxR family n=1 Tax=H... 124 3e-27 UniRef50_Q88E21 Transcriptional regulator, LuxR family n=7 Tax=P... 120 3e-26 UniRef50_D0B4P5 Transcriptional activator n=39 Tax=Brucellaceae ... 117 4e-25 UniRef50_B2I0W2 DNA-binding HTH domain-containing protein n=9 Ta... 115 1e-24 UniRef50_C4I3H7 Autoinducer-binding transcriptional regulator, L... 113 5e-24 UniRef50_C5ANM9 DNA-binding HTH domain-containing protein n=1 Ta... 110 6e-23 UniRef50_B6VM55 Similar to probable transcription regulator SdiA... 107 3e-22 UniRef50_Q3Y8H6 PpuR n=3 Tax=Pseudomonas putida RepID=Q3Y8H6_PSEPU 103 6e-21 UniRef50_A0KHA7 Transcriptional activator protein AhyR/asaR n=2 ... 102 1e-20 UniRef50_A8GCU6 Transcriptional regulator, LuxR family n=2 Tax=S... 102 1e-20 UniRef50_P35327 Transcriptional activator protein luxR n=26 Tax=... 97 3e-19 UniRef50_B2UGC8 Transcriptional regulator, LuxR family n=1 Tax=R... 97 4e-19 UniRef50_B2JQL2 Transcriptional regulator, LuxR family n=5 Tax=B... 96 9e-19 UniRef50_P0A3J5 Transcriptional activator protein ahyR/asaR n=89... 96 1e-18 UniRef50_A0AX00 Transcriptional regulator, LuxR family n=6 Tax=B... 96 1e-18 UniRef50_Q13KP8 Transcriptional regulator, LuxR family n=3 Tax=B... 95 2e-18 UniRef50_A6UE86 Regulatory protein LuxR n=4 Tax=Rhizobiales RepI... 94 6e-18 UniRef50_C3K2E5 Putative LuxR-family regulatory protein n=1 Tax=... 93 6e-18 UniRef50_C4RYA9 Transcription regulator SdiA n=1 Tax=Yersinia be... 93 6e-18 UniRef50_A7KC31 Transcriptional activator protein n=1 Tax=Pseudo... 93 7e-18 UniRef50_UPI00018738D8 transcriptional activator of quorum sensi... 92 2e-17 UniRef50_P55629 Putative HTH-type transcriptional regulator y4qH... 91 2e-17 UniRef50_UPI00016A49A6 transcriptional regulator, LuxR family pr... 91 4e-17 UniRef50_C3KBP0 Putative LuxR-family regulatory protein n=2 Tax=... 91 4e-17 UniRef50_A0ZSG9 LuxR n=1 Tax=Shewanella hanedai RepID=A0ZSG9_SHEHA 89 9e-17 UniRef50_A4BB65 LuxR, transcriptional regulator n=1 Tax=Reinekea... 89 1e-16 UniRef50_Q2T4M4 Autoinducer-binding transcriptional regulator, L... 89 2e-16 UniRef50_A4U2E2 Regulatory protein, LuxR:Autoinducer-binding n=1... 89 2e-16 UniRef50_Q0B5I4 Transcriptional regulator, LuxR family n=1 Tax=B... 87 4e-16 UniRef50_A0KQW9 Transcriptional activator protein AhyR/asaR n=2 ... 87 7e-16 UniRef50_Q2T3H4 Autoinducer-binding transcriptional regulator, L... 87 7e-16 UniRef50_Q46967 Transcriptional activator protein echR n=100 Tax... 86 1e-15 UniRef50_A9HQR0 Putative transcriptional regulator, luxR family ... 85 2e-15 UniRef50_Q39VH7 Transcriptional regulator, LuxR family n=1 Tax=G... 85 2e-15 UniRef50_C4L8Q9 Transcriptional regulator, LuxR family n=1 Tax=T... 84 3e-15 UniRef50_A1TTR7 Transcriptional regulator, LuxR family n=3 Tax=A... 83 9e-15 UniRef50_B0M190 AHL-dependent transcriptional regulator n=2 Tax=... 83 9e-15 UniRef50_B7T9X0 LuxR family transcriptional regulator n=2 Tax=Ba... 83 1e-14 UniRef50_A6CUQ5 LuxR, transcriptional regulator n=1 Tax=Vibrio s... 82 1e-14 UniRef50_A3JLR7 Transcriptional regulator, LuxR family protein n... 82 1e-14 UniRef50_C5AK35 Autoinducer-binding domain protein n=2 Tax=Burkh... 82 2e-14 UniRef50_Q6B346 Acylhomoserine lactone dependent transcriptional... 81 4e-14 UniRef50_Q9AH79 MupR n=2 Tax=Pseudomonas fluorescens RepID=Q9AH7... 80 5e-14 UniRef50_B1VJE7 VR protein n=2 Tax=Pseudomonas fuscovaginae RepI... 80 6e-14 UniRef50_Q2Y6B5 Transcriptional regulator, LuxR family n=1 Tax=N... 79 9e-14 UniRef50_B9K1Q2 DNA-binding HTH domain-containing protein n=1 Ta... 79 1e-13 UniRef50_B1KKQ1 Transcriptional regulator, LuxR family n=1 Tax=S... 79 2e-13 UniRef50_A4JQY4 Response regulator receiver protein n=1 Tax=Burk... 79 2e-13 UniRef50_C6B0L0 Transcriptional regulator, LuxR family n=10 Tax=... 79 2e-13 UniRef50_P74946 Transcriptional activator protein vanR n=3 Tax=V... 78 2e-13 UniRef50_Q3K6H8 LuxR family regulatory protein n=1 Tax=Pseudomon... 78 2e-13 UniRef50_C5V7F6 Transcriptional regulator, LuxR family n=1 Tax=G... 77 3e-13 UniRef50_Q9ANB1 ID375 n=2 Tax=Bradyrhizobium japonicum RepID=Q9A... 76 8e-13 UniRef50_D0LSA4 Transcriptional regulator, LuxR family n=1 Tax=H... 75 1e-12 UniRef50_P25084 Transcriptional activator protein lasR n=10 Tax=... 75 1e-12 UniRef50_Q4ZW02 Regulatory protein, LuxR:Autoinducer-binding n=9... 75 2e-12 UniRef50_B9LZZ1 Transcriptional regulator, LuxR family n=1 Tax=G... 75 2e-12 UniRef50_Q9L6U7 Acylhomoserine lactone dependent transcriptional... 74 3e-12 UniRef50_C6B001 Transcriptional regulator, LuxR family n=13 Tax=... 74 5e-12 UniRef50_Q1GQ40 Transcriptional regulator, LuxR family n=1 Tax=S... 74 5e-12 UniRef50_A4WT88 Autoinducer-binding domain protein n=8 Tax=Rhodo... 74 6e-12 UniRef50_B2VEE0 Transcriptional activator protein n=1 Tax=Erwini... 74 6e-12 UniRef50_B3Q959 Transcriptional regulator, LuxR family n=7 Tax=B... 73 1e-11 UniRef50_B1M9X4 Transcriptional regulator, LuxR family n=2 Tax=M... 72 1e-11 UniRef50_Q7NQP7 Transcriptional activator, LuxR/UhpA family of r... 72 1e-11 UniRef50_Q15YZ8 Transcriptional regulator, LuxR family n=1 Tax=P... 72 2e-11 UniRef50_D2LFU9 Transcriptional regulator, LuxR family n=1 Tax=R... 71 3e-11 UniRef50_B1K7Y6 Transcriptional regulator, LuxR family n=3 Tax=B... 71 4e-11 UniRef50_Q7MYV6 Similar to transcription regulator n=2 Tax=Photo... 70 4e-11 UniRef50_Q4KAK4 Transcriptional regulator, LuxR family n=1 Tax=P... 70 6e-11 UniRef50_Q28T92 Transcriptional regulator, LuxR family n=1 Tax=J... 70 7e-11 UniRef50_B8I9S3 Transcriptional regulator, LuxR family n=1 Tax=M... 70 7e-11 UniRef50_Q98A91 Transcriptional regulator n=4 Tax=Mesorhizobium ... 70 7e-11 UniRef50_Q1GPX8 Transcriptional regulator, LuxR family n=1 Tax=S... 70 8e-11 UniRef50_Q2T747 Transcriptional regulator, LuxR family n=26 Tax=... 70 9e-11 UniRef50_A9DRS2 Transcriptional regulator, LuxR family protein n... 69 9e-11 UniRef50_Q3SUZ7 Transcriptional regulatory protein, LuxR family ... 69 1e-10 UniRef50_A4ELE0 Transcriptional regulator, LuxR family protein n... 69 1e-10 UniRef50_B9TKR4 Transcriptional activator protein ahyR/asaR, put... 69 1e-10 UniRef50_Q2RNV6 Transcriptional regulator, LuxR family n=1 Tax=R... 69 1e-10 UniRef50_Q19U14 Transcriptional activator AlpR n=1 Tax=Azospiril... 69 2e-10 UniRef50_C4XN36 LuxR family transcriptional regulator n=1 Tax=De... 69 2e-10 UniRef50_D2U307 Quorum-sensing transcriptional activator n=1 Tax... 68 2e-10 UniRef50_B1M2Q8 Transcriptional regulator, LuxR family n=1 Tax=M... 68 2e-10 UniRef50_C5B5L7 Putative uncharacterized protein n=1 Tax=Methylo... 68 3e-10 UniRef50_Q11FX6 Transcriptional regulator, LuxR family n=1 Tax=C... 68 3e-10 UniRef50_P54293 Transcriptional activator protein esaR n=7 Tax=E... 67 3e-10 UniRef50_B1Z7Q1 Transcriptional regulator, LuxR family n=3 Tax=M... 67 4e-10 UniRef50_A2SMG0 Putative LuxR-family transcriptional regulator n... 67 4e-10 UniRef50_Q2YJ50 HTH-type quorum sensing-dependent transcriptiona... 67 5e-10 UniRef50_A5EJ34 Putative transcriptional activator n=1 Tax=Brady... 67 6e-10 UniRef50_C9NVD6 Transcriptional activator protein luxR n=1 Tax=V... 66 1e-09 UniRef50_Q4ZNG4 Regulatory protein, LuxR n=8 Tax=Pseudomonas syr... 66 1e-09 UniRef50_Q2NS60 Transcriptional activator n=1 Tax=Sodalis glossi... 65 2e-09 UniRef50_C8SVZ2 Transcriptional regulator, LuxR family n=2 Tax=M... 65 2e-09 UniRef50_A6U9S1 Regulatory protein LuxR n=3 Tax=Rhizobiaceae Rep... 65 2e-09 UniRef50_C4K6Q5 Autoinducer response regulator n=2 Tax=Enterobac... 65 2e-09 UniRef50_Q48KM4 Transcriptional regulator, LuxR family n=6 Tax=P... 65 3e-09 UniRef50_Q2K2Q3 Autoinducer transcriptional regulator protein n=... 65 3e-09 UniRef50_A5G659 Transcriptional regulator, LuxR family n=1 Tax=G... 64 3e-09 UniRef50_Q161C2 Transcription regulator, LuxR family, putative n... 64 3e-09 UniRef50_C5B507 LuxR type transcriptional regulator n=1 Tax=Meth... 64 4e-09 UniRef50_B0U8W7 Transcriptional regulator, LuxR family n=4 Tax=M... 64 6e-09 UniRef50_A3UFL6 Transcriptional regulatory protein, LuxR family ... 64 6e-09 UniRef50_B9JZN6 Transcriptional regulator LuxR family n=1 Tax=Ag... 63 7e-09 UniRef50_A9D0L4 Putative LuxR/GerE family transcriptional regula... 63 7e-09 UniRef50_A7IQ01 Autoinducer-binding domain protein n=1 Tax=Xanth... 63 9e-09 UniRef50_B9J7F2 Transcriptional regulator protein n=10 Tax=Rhizo... 63 1e-08 UniRef50_B5A461 Quorum sensing regulator n=1 Tax=Mesorhizobium t... 63 1e-08 UniRef50_A9CI30 Transcriptional regulator, LuxR family n=1 Tax=A... 62 1e-08 UniRef50_B9JVS5 Transcriptional regulator LuxR family n=3 Tax=Ag... 62 1e-08 UniRef50_A9D281 Probable transcriptional regulator protein, LuxR... 62 1e-08 UniRef50_B6R6S8 Transcriptional regulator, LuxR family n=1 Tax=P... 62 1e-08 UniRef50_A9DE85 Probable transcriptional regulator protein, LuxR... 62 2e-08 UniRef50_B3VN68 PanR n=1 Tax=Pantoea sp. CWB304 RepID=B3VN68_9ENTR 62 2e-08 UniRef50_A3T328 Autoinducer-binding transcriptional regulator Lu... 62 2e-08 UniRef50_Q46751 Transcriptional activator protein carR n=4 Tax=E... 62 2e-08 UniRef50_B6R4Z6 Transcriptional regulator, LuxR family protein n... 62 2e-08 UniRef50_C6Y3Z3 Regulatory protein LuxR n=2 Tax=Pedobacter hepar... 62 2e-08 UniRef50_A4C9D7 LuxR, transcriptional regulator n=1 Tax=Pseudoal... 62 2e-08 UniRef50_Q13HW9 Transcriptional regulator, LuxR family n=3 Tax=B... 61 2e-08 UniRef50_Q21EX4 Transcriptional regulator, LuxR family n=1 Tax=S... 61 3e-08 UniRef50_A4XEP8 Regulatory protein, LuxR n=2 Tax=Sphingomonadace... 61 3e-08 UniRef50_Q7CWE0 Transcriptional regulator, LuxR family n=1 Tax=A... 61 3e-08 UniRef50_A6U6L8 Regulatory protein LuxR n=3 Tax=Rhizobiaceae Rep... 61 4e-08 UniRef50_Q11IH2 Transcriptional regulator, LuxR family n=1 Tax=C... 60 4e-08 UniRef50_B3PCB5 Putative two-component transcriptional regulator... 60 4e-08 UniRef50_B9JA22 Transcriptional regulator protein n=10 Tax=Rhizo... 60 5e-08 UniRef50_B8G436 Transcriptional regulator, LuxR family n=3 Tax=C... 60 5e-08 UniRef50_C6XPJ3 Transcriptional regulator, LuxR family n=1 Tax=H... 60 6e-08 UniRef50_Q21BG2 Transcriptional regulator, LuxR family n=1 Tax=R... 60 6e-08 UniRef50_A9D9Y9 Putative transcriptional regulator protein, LuxR... 60 7e-08 UniRef50_A5P6H4 Transcriptional regulator, LuxR family protein n... 60 7e-08 UniRef50_A8LML6 Putative transcriptional regulator n=1 Tax=Dinor... 59 9e-08 UniRef50_A5V2N0 Transcriptional regulator, LuxR family n=1 Tax=S... 59 1e-07 UniRef50_A9HYE4 Transcriptional regulator, LuxR-family n=2 Tax=P... 59 1e-07 UniRef50_Q9F5D3 Riorf119 protein n=2 Tax=Agrobacterium rhizogene... 59 1e-07 UniRef50_Q03316 Regulatory protein rhiR n=2 Tax=Rhizobium legumi... 59 1e-07 UniRef50_B0SZK2 Transcriptional regulator, LuxR family n=4 Tax=A... 59 1e-07 UniRef50_A4U068 Signal transduction histidine kinase n=1 Tax=Mag... 59 1e-07 UniRef50_P55407 Probable transcriptional activator protein traR ... 59 2e-07 UniRef50_A5EUQ4 Transcriptional regulator, LuxR family n=1 Tax=B... 59 2e-07 UniRef50_Q1LCE4 Two component transcriptional regulator, LuxR fa... 59 2e-07 UniRef50_C5A948 Transcriptional regulator, LuxR family protein n... 59 2e-07 UniRef50_B5ZUI2 Transcriptional regulator, LuxR family n=8 Tax=R... 58 2e-07 UniRef50_B2IHP8 Transcriptional regulator, LuxR family n=2 Tax=B... 58 2e-07 UniRef50_A6F7D7 Transcriptional regulator, LuxR family n=1 Tax=M... 58 2e-07 UniRef50_C8Q1R2 Transcriptional regulator, LuxR family n=4 Tax=E... 58 3e-07 UniRef50_B0ZTC2 Transcriptional regulator n=4 Tax=Mesorhizobium ... 58 3e-07 UniRef50_Q28MF2 Transcriptional regulator, LuxR family n=1 Tax=J... 57 4e-07 UniRef50_A4XFC7 Regulatory protein, LuxR n=1 Tax=Novosphingobium... 57 5e-07 UniRef50_A3S0X6 Putative uncharacterized protein n=8 Tax=Ralston... 57 5e-07 UniRef50_C1SGH5 Response regulator containing a CheY-like receiv... 57 7e-07 UniRef50_C8SNG6 Transcriptional regulator, LuxR family n=1 Tax=M... 57 7e-07 UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexac... 57 8e-07 UniRef50_A6U6L7 Regulatory protein LuxR n=3 Tax=Rhizobiaceae Rep... 56 9e-07 UniRef50_A4U2G3 Transcriptional activator protein n=1 Tax=Magnet... 56 9e-07 UniRef50_Q1GYL3 Transcriptional regulator, LuxR family n=1 Tax=M... 56 1e-06 UniRef50_Q4ZVS2 Regulatory protein, LuxR n=2 Tax=Pseudomonas syr... 56 1e-06 UniRef50_D2TJP9 Quorum sensing transcriptional regulator CroR n=... 56 1e-06 UniRef50_C6P1V2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Si... 55 1e-06 UniRef50_C0R2A4 DNA-binding response regulator, LuxR family prot... 55 1e-06 UniRef50_Q8KW81 RC109 n=1 Tax=Ruegeria sp. PR1b RepID=Q8KW81_9RHOB 55 1e-06 UniRef50_UPI0001746371 methyl-accepting chemotaxis sensory trans... 55 2e-06 UniRef50_Q2NWB5 Transcriptional activator protein n=1 Tax=Sodali... 55 2e-06 UniRef50_B7T9X4 LuxR family transcriptional regulator n=1 Tax=un... 55 2e-06 UniRef50_Q2RSB6 Transcriptional regulator, LuxR family n=1 Tax=R... 55 2e-06 UniRef50_A7NFQ1 Transcriptional regulator, LuxR family n=1 Tax=R... 55 2e-06 UniRef50_C5ADX8 Acylhomoserine lactone dependent transcriptional... 55 2e-06 UniRef50_D1C6S1 Two component transcriptional regulator, LuxR fa... 55 2e-06 UniRef50_D2M390 Transcriptional regulator, LuxR family n=1 Tax=R... 55 2e-06 UniRef50_C5CQX2 Two component transcriptional regulator, LuxR fa... 55 2e-06 UniRef50_C6B8S2 Transcriptional regulator, LuxR family n=1 Tax=R... 55 3e-06 UniRef50_A5UQJ6 Response regulator receiver protein n=1 Tax=Rose... 55 3e-06 UniRef50_A6ULF7 Response regulator receiver protein n=1 Tax=Sino... 55 3e-06 UniRef50_B9QZV4 Sigma-70, region 4 family n=3 Tax=Rhodobacterace... 54 3e-06 UniRef50_Q4ZNM6 Regulatory protein, LuxR n=9 Tax=Gammaproteobact... 54 3e-06 UniRef50_A2SE70 ATP-dependent transcriptional regulator-like pro... 54 3e-06 UniRef50_A5PE73 Transcriptional regulator, LuxR family protein n... 54 4e-06 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 54 4e-06 UniRef50_A0L9F1 Two component transcriptional regulator, LuxR fa... 54 4e-06 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 54 4e-06 UniRef50_Q483F6 Transcriptional regulator, LuxR family n=1 Tax=C... 54 4e-06 UniRef50_Q1NBZ0 Transcriptional regulator, LuxR family protein n... 54 4e-06 UniRef50_Q1NJX6 Regulatory protein, LuxR:Response regulator rece... 54 4e-06 UniRef50_B9JSF3 Transcriptional regulator LuxR family n=5 Tax=Rh... 54 5e-06 UniRef50_D1CI66 Two component transcriptional regulator, LuxR fa... 54 5e-06 UniRef50_B3DZX3 Transcriptional regulator LuxR family n=1 Tax=Me... 54 5e-06 UniRef50_UPI0001926D44 PREDICTED: similar to predicted protein n... 54 5e-06 UniRef50_C9YDQ4 Putative uncharacterized protein n=1 Tax=Curviba... 54 5e-06 UniRef50_B4RHX3 Transcriptional regulator, LuxR family n=1 Tax=P... 54 5e-06 UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=... 54 5e-06 UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob... 54 5e-06 UniRef50_Q1MLG3 Regulator of flagellar and motility genes, also ... 54 5e-06 UniRef50_Q21GE5 Response regulator receiver n=2 Tax=Gammaproteob... 54 6e-06 UniRef50_Q1YUC8 Putative uncharacterized protein n=1 Tax=gamma p... 54 6e-06 UniRef50_UPI0001969032 hypothetical protein BACCELL_01743 n=1 Ta... 54 6e-06 UniRef50_A5VEI3 Regulatory protein, LuxR n=1 Tax=Sphingomonas wi... 53 7e-06 UniRef50_Q6FD15 Putative transcriptional regulator, luxR family ... 53 7e-06 UniRef50_B2J8J5 Two component transcriptional regulator, LuxR fa... 53 7e-06 UniRef50_Q1QF64 Transcriptional regulator, LuxR family n=1 Tax=N... 53 7e-06 UniRef50_A6L0C8 Transcriptional regulator n=3 Tax=Bacteroides Re... 53 7e-06 UniRef50_A9CYJ1 Putative GerE/LuxR family transcriptional regula... 53 9e-06 UniRef50_A3SSF6 Transcriptional regulator, LuxR family protein n... 53 9e-06 UniRef50_D0X6W6 Putative uncharacterized protein n=1 Tax=Vibrio ... 53 9e-06 UniRef50_C6Y3I6 Regulatory protein LuxR n=1 Tax=Pedobacter hepar... 53 9e-06 UniRef50_Q98HF2 Transcriptional regulator n=2 Tax=Mesorhizobium ... 53 1e-05 UniRef50_C8W5L4 Two component transcriptional regulator, LuxR fa... 53 1e-05 UniRef50_C6WVK1 ATP-dependent transcriptional regulator, MalT-li... 53 1e-05 UniRef50_A5V7U1 Regulatory protein, LuxR n=4 Tax=Proteobacteria ... 53 1e-05 UniRef50_C7M1Y7 Two component transcriptional regulator, LuxR fa... 53 1e-05 UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paeniba... 52 1e-05 UniRef50_B0T7R0 Transcriptional regulator, LuxR family n=1 Tax=C... 52 1e-05 UniRef50_B5ZTN8 Transcriptional regulator, LuxR family n=8 Tax=R... 52 1e-05 UniRef50_A6UCQ1 Regulatory protein LuxR n=2 Tax=Sinorhizobium Re... 52 1e-05 UniRef50_C1DE28 Transcriptional regulatory protein AcoK, LuxR fa... 52 1e-05 UniRef50_B2IKZ9 Transcriptional regulator, LuxR family n=1 Tax=B... 52 1e-05 UniRef50_B6IU89 Glycerol metabolism activator AgmR n=1 Tax=Rhodo... 52 1e-05 UniRef50_B3PDX5 Response regulator n=1 Tax=Cellvibrio japonicus ... 52 1e-05 UniRef50_Q04VJ6 Receiver component of a two-component response r... 52 1e-05 UniRef50_A4EXT1 Possible LuxR family protein n=1 Tax=Roseobacter... 52 1e-05 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 52 1e-05 UniRef50_Q1NCQ8 Putative uncharacterized protein n=1 Tax=Sphingo... 52 1e-05 UniRef50_A4AF49 Putative two-component system response regulator... 52 2e-05 UniRef50_D1SQ54 Two component transcriptional regulator, LuxR fa... 52 2e-05 UniRef50_B9TH31 Putative uncharacterized protein n=1 Tax=Ricinus... 52 2e-05 UniRef50_A4U0R2 DNA-binding response regulator, LuxR family n=1 ... 52 2e-05 UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeoba... 52 2e-05 UniRef50_Q0C2U0 DNA-binding response regulator FixJ n=1 Tax=Hyph... 52 2e-05 UniRef50_B1ZU68 Two component transcriptional regulator, LuxR fa... 52 2e-05 UniRef50_B6B644 Response regulator receiver protein, putative n=... 52 2e-05 UniRef50_A1VTE6 Two component transcriptional regulator, LuxR fa... 52 2e-05 >UniRef50_P07026 Regulatory protein sdiA n=104 Tax=Enterobacteriaceae RepID=SDIA_ECOLI Length = 240 Score = 504 bits (1297), Expect = e-141, Method: Compositional matrix adjust. Identities = 240/240 (100%), Positives = 240/240 (100%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY Sbjct: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT Sbjct: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF Sbjct: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI Sbjct: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 >UniRef50_Q5EM19 ExpR n=2 Tax=Erwinia RepID=Q5EM19_ERWAM Length = 240 Score = 229 bits (583), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 109/240 (45%), Positives = 164/240 (68%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 M +++F WR + +++ + + IE Q ++LE D+YSL +RHPVPFTRPK Y Sbjct: 1 MTSENYFIWRADIKSAYEKGSGTDHITRLIEQQLRELELDFYSLFIRHPVPFTRPKTFLY 60 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120 +NYP+ W+ +Y + F +DPVL + +W+D S ++E AR +G+ G++ Sbjct: 61 SNYPQDWLDHYWREGFYQLDPVLEMCSSPGKIWLWDDKTISAGLCVFEHARNYGIFHGLS 120 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 +M NR++G LS S +++++ L+ E +LK+Q ++ S+ AL+ +ND + T +++F Sbjct: 121 CSVMASNRSVGILSMSTANSQKLIKLTTETELKIQYVLELSMAALININDISMATTKLDF 180 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 S+RE EIL+WTAEGKTSAEI++ILSIS+NTVNFHQK MQK+ NAPNKTQ+A YAAA GLI Sbjct: 181 SERELEILKWTAEGKTSAEISLILSISQNTVNFHQKKMQKRFNAPNKTQIASYAAAVGLI 240 >UniRef50_C8QEN4 Transcriptional regulator, LuxR family n=1 Tax=Pantoea sp. At-9b RepID=C8QEN4_9ENTR Length = 240 Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 108/240 (45%), Positives = 154/240 (64%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 M ++F WR ++FQ + ++ ++ + L +DY++ ++HPVPFTRP++ + Sbjct: 1 MTTDNYFVWRGETEIQFQAVTAVLQLKALLQKHIETLGFDYFAFLIQHPVPFTRPRIFLF 60 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120 + YPE WV +Y+++N+ A+DPVL + W DLF+ A LW A A+GL G + Sbjct: 61 STYPEDWVKHYESENYYAVDPVLLLCQRPGHGVEWTRDLFTGAGNLWAEANAYGLMSGFS 120 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 M NRA+G LS + + L EL++K+ L SL L RLND ++ +F Sbjct: 121 CSAMASNRAIGILSIASGQQSKTQHLRVELEVKLHFLAELSLRVLERLNDNAMVVLSNDF 180 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 S+RE EIL+WTAEGKTSAEI++IL+ISE+TVNFHQKNMQK+ N NKTQ+ACYAAA GLI Sbjct: 181 SQRELEILKWTAEGKTSAEISLILAISEHTVNFHQKNMQKRFNVSNKTQIACYAAAIGLI 240 >UniRef50_D2TD82 DNA-binding transcriptional activator SdiA n=2 Tax=Erwinia pyrifoliae RepID=D2TD82_ERWPY Length = 242 Score = 223 bits (567), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 108/240 (45%), Positives = 160/240 (66%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 M +D+F WR + +++ + IE Q ++LE D+YSL +RHPVPFTRPK Y Sbjct: 3 MTSEDYFIWRADIKSAYEKGGGIVHITRIIEQQLRELELDFYSLFIRHPVPFTRPKTFLY 62 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120 +NYPE W+ +Y ++F +DPVL +W+D+ S ++E AR +G+ G++ Sbjct: 63 SNYPEDWLEHYFREDFYQLDPVLKMCGSPGKIWLWDDEAISSGVRVFENARNYGIFHGLS 122 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 +M NR++G S S ++ + L+ ++LK+Q + S+ +L+++ND + T +++ Sbjct: 123 CSVMASNRSVGIFSMSTANSLKTIELTPVMELKIQYISELSMASLIKINDISMATTKLDL 182 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 S+RE EIL+WTAEGKTSAEI++ILSISENTVNFHQK MQK+ NAPNKTQ+A YAAA GLI Sbjct: 183 SQRELEILKWTAEGKTSAEISLILSISENTVNFHQKKMQKRFNAPNKTQIASYAAAIGLI 242 >UniRef50_P54292 Regulatory protein rhlR n=12 Tax=Bacteria RepID=RHLR_PSEAE Length = 241 Score = 179 bits (454), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 97/238 (40%), Positives = 144/238 (60%) Query: 3 DKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTN 62 D F W + Q + ++ V+ +E + ++L +DYY+ VRH +PFTRPK + Sbjct: 4 DGGFLLWWDGLRSEMQPIHDSQGVFAVLEKEVRRLGFDYYAYGVRHTIPFTRPKTEVHGT 63 Query: 63 YPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQY 122 YP+AW+ YQ +N+ A+DP + S ++W+D LF +++ LW AR GL G T Sbjct: 64 YPKAWLERYQMQNYGAVDPAILNGLRSSEMVVWSDSLFDQSRMLWNEARDWGLCVGATLP 123 Query: 123 LMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSK 182 + PN L LS +R +E++L+++ ++ L L ++M+ + S Sbjct: 124 IRAPNNLLSVLSVARDQQNISSFEREEIRLRLRCMIELLTQKLTDLEHPMLMSNPVCLSH 183 Query: 183 REKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 RE+EIL+WTA+GK+S EIA+ILSISE+TVNFH KN+QKK +APNKT A YAAA GLI Sbjct: 184 REREILQWTADGKSSGEIAIILSISESTVNFHHKNIQKKFDAPNKTLAAAYAAALGLI 241 >UniRef50_B5EJV5 Transcriptional regulator, LuxR family n=4 Tax=Acidithiobacillus ferrooxidans RepID=B5EJV5_ACIF5 Length = 237 Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 90/241 (37%), Positives = 131/241 (54%), Gaps = 17/241 (7%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWV 68 W+ +L FQ +E +V A++LE+DY + +R P+P RPK ++NYP W Sbjct: 4 WKEDLLQTFQSIECERQVLAMASEMARKLEFDYCAYGLRMPLPLVRPKTVLFSNYPAVWQ 63 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNR 128 + YQA+ + AIDP + S ++W+DDLF+ A+ LWE AR+ GLR G+ Sbjct: 64 ARYQAQEYQAIDPTVRHAMRSPSPVVWSDDLFAPARELWEEARSFGLRAGLAHTCRDAGG 123 Query: 129 ALGFLSFSRCSAREIPILSDELQLK---MQLLVRESLMALMRLNDEIVMTPEM------N 179 G L+ +R + + E Q K + LV+ ++++R V+ P++ Sbjct: 124 MGGMLTLARAGET---VTTAEWQAKACHILWLVQAVHLSMIR-----VIAPKLQPEIAVQ 175 Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 S RE E+LRWT EGKTS EIA IL+I+E TVNFH K+NA NKT AA GL Sbjct: 176 LSCREVEVLRWTGEGKTSGEIANILNITERTVNFHISKAMAKLNAVNKTAAVLQAAMLGL 235 Query: 240 I 240 + Sbjct: 236 L 236 >UniRef50_Q2SXK0 Autoinducer-binding transcriptional regulator, LuxR family n=31 Tax=Burkholderiaceae RepID=Q2SXK0_BURTA Length = 241 Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 84/237 (35%), Positives = 129/237 (54%), Gaps = 7/237 (2%) Query: 8 SWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAW 67 +W +L + +E + IE A L+++Y + +R P P +RP++ +N+PE W Sbjct: 7 NWAEDLLAGLDSARSEDEAFRSIETAATALDFEYCAYGLRVPWPLSRPRIETRSNFPEQW 66 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPN 127 Y FL +DP+L SQ ++ N+ LF+ + +W A++ GLR G Q Sbjct: 67 KRRYVEAGFLDVDPILAHGRRSQQPVVLNETLFASSHQMWVEAQSFGLRFGWAQSSFDAY 126 Query: 128 RALGFLSFSRCSAREIPILSDELQLK---MQLLVRESLMALMRLN-DEIVMTPEMNFSKR 183 +G L+ R +RE P+ EL K M+ LVR + AL R+ +++ PE ++R Sbjct: 127 GGMGMLALVR--SRE-PVTHAELDAKEYRMRWLVRTAHAALGRMMLPKLMADPERGLTER 183 Query: 184 EKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E E+L+W A+GKTS EI+ IL+IS +TVNFH KN K+ NKT AA GL+ Sbjct: 184 EVEVLKWAADGKTSGEISKILAISVDTVNFHVKNAILKLRTANKTAAVVRAAMLGLL 240 >UniRef50_C5D054 Transcriptional regulator, LuxR family n=1 Tax=Variovorax paradoxus S110 RepID=C5D054_VARPS Length = 235 Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 79/235 (33%), Positives = 131/235 (55%), Gaps = 7/235 (2%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWV 68 W + +L R +V ++ + A+QL +++ + +R VPFTRPK ++ Y E W Sbjct: 4 WTQDVLGRLDEASEPSQVLAQVSVAARQLGFEHCAYGLRTLVPFTRPKTLMFSTYDERWS 63 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNR 128 Y + +L +DP + S ++W++++F +A +W+ AR+ GLR G Q + P+ Sbjct: 64 RRYISAGYLQVDPTVAHGVHSGTPVIWSNEVFRDAPQMWDEARSFGLRVGWAQSVFEPDA 123 Query: 129 ALGFLSFSRCSAREIPILSDELQLK---MQLLVRESLMALMRLNDEIVMTPEMNFSKREK 185 +G LS +R S P+ + E++ K Q LV ++ A RL + E +KR+ Sbjct: 124 RVGMLSLARSSE---PLTAAEMRAKDLLFQGLVNKAHRAFCRLLGGPLAGIE-PLTKRQV 179 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E+LRWT +GKTS EIA IL IS+ TV+FH +N ++ A K+ A +A+ GL+ Sbjct: 180 EVLRWTGDGKTSDEIAAILCISKPTVDFHLRNAMARLGASTKSSAAAFASRLGLL 234 >UniRef50_UPI00016A4E80 probable transcriptional activator of quorum sensing autoinducer synthesis transcription regulator protein n=1 Tax=Burkholderia oklahomensis EO147 RepID=UPI00016A4E80 Length = 236 Score = 142 bits (359), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 80/231 (34%), Positives = 120/231 (51%), Gaps = 6/231 (2%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQ 72 +LL + T+ E++ +E ++L +D +S HP+PFT+P++ +NYPE W Y Sbjct: 8 LLLSITQKSTSSEIFSSLEKYTRELGFDNFSYGFCHPIPFTKPRIVILSNYPERWRGRYS 67 Query: 73 AKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGF 132 ++ IDP + SQ W++ S+ + W+ A AHGL G + ++ + LG Sbjct: 68 ELGYVNIDPTVLHGRNSQSPFTWSELPTSDVRSFWDEANAHGLVVGWAKSILDSDGGLGM 127 Query: 133 LSFSRCSAREIPILSDEL---QLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILR 189 L+ +R + + EL L+M LL + M L + + S RE EILR Sbjct: 128 LTLARSNEE---LCGKELAAKNLRMCLLADLTHMVLSDAYRKEMTASADKLSAREVEILR 184 Query: 190 WTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 W A+GKT+ EI ILSIS +TV FH KN K+ A NKT AA GL+ Sbjct: 185 WHADGKTADEIGRILSISIDTVKFHTKNAVVKLGASNKTAAVARAAIMGLL 235 >UniRef50_P58590 Transcriptional activator protein solR n=8 Tax=Burkholderiaceae RepID=SOLR1_RALSO Length = 236 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 83/231 (35%), Positives = 118/231 (51%), Gaps = 13/231 (5%) Query: 17 FQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNF 76 F + +++ +I +QL +DY +R P+P ++P VA + YP W+ +YQA F Sbjct: 12 FHTAQDERQLFRQIASVVRQLGFDYCCYGIRVPLPVSKPAVAIFDTYPAGWMEHYQASGF 71 Query: 77 LAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFS 136 L IDP + S ++W + EA LW AR GL GV + + A G L+ + Sbjct: 72 LEIDPTVRTGASSSDLIIWPVSIRDEAARLWSDARDFGLNIGVARSSWTAHGAFGLLTLA 131 Query: 137 RCSAREIPILSDELQLKMQLLVRESLM-----ALMR--LNDEIVMTPEMNFSKREKEILR 189 R R P+ + EL+ QL + + ALM L ++V + RE+E+L Sbjct: 132 R---RADPLTAAELE---QLSATTNWLANLAHALMSPFLMPKLVPESSAALTAREREVLC 185 Query: 190 WTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 WT EGKT+ EI IL ISE TVNFH N+ K+ A NK Q A A GLI Sbjct: 186 WTGEGKTAYEIGQILRISERTVNFHVNNVLLKLAATNKVQAVVKAIAIGLI 236 >UniRef50_Q51786 Transcriptional activator protein phzR n=6 Tax=Pseudomonas RepID=PHZR_PSEFL Length = 244 Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 74/221 (33%), Positives = 118/221 (53%), Gaps = 8/221 (3%) Query: 25 EVYHEIELQA-QQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVL 83 E + + L+A ++L +D+++ + PF RPK Y NYPE W+ YQA N+ IDP + Sbjct: 27 EEFTVVALRALRELRFDFFAYGMCSVTPFMRPKTYMYGNYPEHWLQRYQAANYALIDPTV 86 Query: 84 NPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREI 143 S ++W+++LF LW A L G+ Q +G LS +R ++ Sbjct: 87 KHSKVSSAPILWSNELFRNCPDLWSEANDSSLCHGLAQPSFNTQGRVGVLSLAR---KDN 143 Query: 144 PILSDELQLKMQLLVRESLMALMRLN----DEIVMTPEMNFSKREKEILRWTAEGKTSAE 199 I E + + + AL +++ D ++ FS+RE ++LRWTA+GKTS E Sbjct: 144 AISLQEFEALKPVTKAFAAAALEKISALETDVRAFNTDVEFSERECDVLRWTADGKTSEE 203 Query: 200 IAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 I +I+ + +TVN+H +N+Q+KI A N+ Q YA A G I Sbjct: 204 IGVIMGVCTDTVNYHHRNIQRKIGASNRVQAVSYAVALGYI 244 >UniRef50_A1KWS2 Quorum sensing LuxR family sensor regulator n=3 Tax=Burkholderia RepID=A1KWS2_BURGL Length = 349 Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 70/216 (32%), Positives = 116/216 (53%), Gaps = 1/216 (0%) Query: 16 RFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKN 75 +F E ++++H++ +++L ++Y +R P P ++P V + YP W+++YQA+N Sbjct: 11 QFNTAENEQQLFHQVSAYSKRLGFEYCCYGIRVPQPGSQPLVEIFDTYPPGWMAHYQARN 70 Query: 76 FLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSF 135 ++ IDP + S ++W D +E LW AR G+ GV Q G L+ Sbjct: 71 YIEIDPTVRDGAASPNMIIWPDADAAEQPSLWRDARDFGMSVGVAQSSWAARGVFGLLTI 130 Query: 136 SRCSAREIPILSDELQLKMQLLVRESLMALMR-LNDEIVMTPEMNFSKREKEILRWTAEG 194 +R S R P + L L+ L S + R L ++ ++ +KRE+E+L WT+EG Sbjct: 131 ARRSDRLTPAEINSLTLQANWLANLSHSLMGRFLVPKLSPAASISLTKREREVLSWTSEG 190 Query: 195 KTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQV 230 +T++EI L+ISE TV FH N+ K+ A NK Q Sbjct: 191 RTASEIGEQLNISERTVTFHINNILAKLGAANKVQA 226 >UniRef50_Q0B318 Transcriptional regulator, LuxR family n=3 Tax=Burkholderia RepID=Q0B318_BURCM Length = 237 Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 78/237 (32%), Positives = 128/237 (54%), Gaps = 7/237 (2%) Query: 8 SWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAW 67 +W +L + + E + +I +++ ++Y + C++ P P +R KV ++N+PE W Sbjct: 3 NWMEQILYEIEATHSEHEAFGKIASAVKEIGFEYSAYCLQTPWPLSRRKVLVFSNFPEPW 62 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPN 127 Y ++ +DP+L S ++W+D +F LWE A+AHGLR G + + Sbjct: 63 QRRYHDARYIDVDPLLRRGRQSYAPVIWSDAVFEGTPQLWEEAQAHGLRYGYSLAAVSNC 122 Query: 128 RALGFLSFSRCSAREIPILSDELQ---LKMQLLVRESLMALMR-LNDEIVMTPEMNFSKR 183 G +S +R P+ ELQ LKM+ LV + +A+ R + ++ ++ + R Sbjct: 123 GVSGMMSMARS---HTPLTVRELQQQELKMRWLVNAAHLAITRAVLPKLSPEGDIELTDR 179 Query: 184 EKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E E+L+W A+GKT+AEI+MI+ IS TVNFH KN K+N N T AA GL+ Sbjct: 180 EVEVLKWVADGKTAAEISMIMLISVYTVNFHVKNAVTKLNTSNATAAVARAAMLGLL 236 >UniRef50_A0MSL2 Transcriptional regulator n=8 Tax=Burkholderia cepacia complex RepID=A0MSL2_BURVI Length = 237 Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 76/237 (32%), Positives = 118/237 (49%), Gaps = 7/237 (2%) Query: 8 SWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAW 67 +WR L F ++ +V+ E + L +D+ S +R P+P ++P+ +NYP+ W Sbjct: 3 AWREKYLNGFATAKSEADVFLEFSADVRALGFDHCSFGLRIPLPISKPQFMLQSNYPQTW 62 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPN 127 V Y ++N+ A+DP + L+W D ++ WE A HGLR G + Sbjct: 63 VERYVSQNYFAVDPTVRHGLSRMSPLIWRADSQTQCVQFWEEADQHGLRHGWCMPSVSRT 122 Query: 128 RALGFLSFSRCSAREIPILSDELQLK---MQLLVRESLMAL-MRLNDEIVMTPEMNFSKR 183 A+G ++ R PI EL K M L + A+ M L +V + + R Sbjct: 123 GAIGLITMVRSGE---PIEERELAEKGYQMSWLANTANYAMSMHLLQRLVPEYTVELTVR 179 Query: 184 EKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E+E L+W+A GKT AEI I+ + + TV FH N +K+NA NKT+ A A GL+ Sbjct: 180 EREALQWSAAGKTYAEIGKIMHVDDRTVKFHLVNAMRKLNAANKTEAAVKATMLGLL 236 >UniRef50_A4JSV0 Transcriptional regulator, LuxR family n=2 Tax=Burkholderia cepacia complex RepID=A4JSV0_BURVG Length = 239 Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 79/237 (33%), Positives = 123/237 (51%), Gaps = 10/237 (4%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWV 68 WR ++L ++ ETA + + + + L ++Y++ +R +P TRP + N+P+AW Sbjct: 4 WRESLLASMEQAETASDAFDGLAPAVRALGFEYHAYVLRVTIPITRPASMEWNNFPQAWR 63 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNR 128 ++Y K + DPVL+ + W L W A GLR G +Q L Sbjct: 64 AHYAQKRYQHADPVLHYGQACTRPMPWPGPLAGH-DAFWRDAADFGLRHGWSQTLRDHRG 122 Query: 129 ALGFLSFSRCSAREIPILSDEL---QLKMQLLVR--ESLMALMRLNDEIVMTPEMNFSKR 183 A+G S R PI +EL + +M L + + M+ + ++D ++ + M S R Sbjct: 123 AMGTFSLVRGGP---PISPEELRRTEPEMIWLCQFVHATMSNLIVSD-VMPSGAMRLSLR 178 Query: 184 EKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 EKE+L WTAEGKT+AE+A IL ++E V FH +N K++A NKT AA GLI Sbjct: 179 EKEVLHWTAEGKTAAEVAAILQLTERNVGFHIQNAMDKLDATNKTHATVKAAMLGLI 235 >UniRef50_A9JPW9 PmrR protein n=1 Tax=Pseudomonas sp. RW10S2 RepID=A9JPW9_9PSED Length = 236 Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 69/219 (31%), Positives = 113/219 (51%), Gaps = 7/219 (3%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWV 68 W ML + + E++ A+ L +DY + +R P+P T+P++ +NY W Sbjct: 3 WMGDMLSAVYDARDTQTLLEEVKAAARHLGFDYCAYGLRTPLPVTKPRIFMLSNYSRPWC 62 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNR 128 +Y A +L +DP + S ++W D++F++A LW+ AR GLR G Q + ++ Sbjct: 63 DHYHANGYLLLDPTVRHCQRSMQPVVWGDEIFADAPQLWDEARQAGLRHGWAQSCLEGSK 122 Query: 129 ALGFLSFSRCSAREIPILSDEL---QLKMQLLVRESLMALMR-LNDEIVMTPEMNFSKRE 184 G L+ +R I EL + +M+ L + R L+D P+ S+RE Sbjct: 123 GGGMLTLARSGE---GIGEGELRAHETRMRWLANVAHQGFSRLLSDSWQPQPQSPLSERE 179 Query: 185 KEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKIN 223 +E+LRW A+GKT E+A IL++S TV FH +N K+ Sbjct: 180 REVLRWAADGKTLNEVADILTLSIETVKFHTRNAGAKLG 218 >UniRef50_B7VAX6 Quorum-sensing control repressor n=7 Tax=Pseudomonas aeruginosa RepID=B7VAX6_PSEA8 Length = 237 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 77/235 (32%), Positives = 115/235 (48%), Gaps = 7/235 (2%) Query: 10 RRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVS 69 R L R+ T EE + + ++++S R P P T PK F +NYP W S Sbjct: 5 REGYLEILSRITTEEEFFSLVLEICGNYGFEFFSFGARAPFPLTAPKYHFLSNYPGEWKS 64 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRA 129 Y ++++ +IDP++ L+WN + F E + WE A HG+R G + + Sbjct: 65 RYISEDYTSIDPIVRHGLLEYTPLIWNGEDFQENRFFWEEALHHGIRHGWSIPVRGKYGL 124 Query: 130 LGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIV--MTPEMN--FSKREK 185 + LS R S I + E+ K L+ + M D + + PE N + RE Sbjct: 125 ISMLSLVRSSE---SIAATEILEKESFLLWITSMLQATFGDLLAPRIVPESNVRLTARET 181 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E+L+WTA GKT EI +ILSI + TV FH N +K+N+ NK + A A GL+ Sbjct: 182 EMLKWTAVGKTYGEIGLILSIDQRTVKFHIVNAMRKLNSSNKAEATMKAYAIGLL 236 >UniRef50_B1Z3D8 Transcriptional regulator, LuxR family n=4 Tax=Burkholderia ambifaria RepID=B1Z3D8_BURA4 Length = 228 Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 76/228 (33%), Positives = 119/228 (52%), Gaps = 8/228 (3%) Query: 17 FQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNF 76 R + ++V+ + QA+ L+++ + R P+P TRP YPE+W Y N+ Sbjct: 4 LSRALSFDDVFEIVAAQARALDFEMCAYGARDPLPVTRPTFRTRNTYPESWQQRYIEGNY 63 Query: 77 LAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFS 136 A DPV+ L+W D ++ + WE A+AHG+ G +Q + + + S + Sbjct: 64 FARDPVVRYGLIYTSPLVWPVDACAD-ESFWEEAKAHGVAHGWSQPIRDKHGRIAMWSVA 122 Query: 137 RCSAREIPILSDEL---QLKMQLLVRESLMALMRLNDEIVMTPEMN-FSKREKEILRWTA 192 R + PI EL + ++ L + RL D +M F+ REKE+L+W A Sbjct: 123 RSAD---PISDLELAATESRLIYLAHAAHAVNSRLVDAPAAAMQMGPFTTREKEVLKWAA 179 Query: 193 EGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +GKT+ EIA ILSISE T+ FH +N+ +K+N+ NKTQ A G+I Sbjct: 180 DGKTALEIASILSISERTITFHMQNIMEKLNSVNKTQAIVKAVLLGII 227 >UniRef50_D0KZC8 Transcriptional regulator, LuxR family n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZC8_HALNC Length = 237 Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 75/237 (31%), Positives = 121/237 (51%), Gaps = 9/237 (3%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWV 68 W+ ++ + Q E E + +IE +A L ++ + +R + T KV NY + W Sbjct: 4 WQGDLVSQIQSAENEESAFKKIEDEALALGFENAAYGLRLNLNITNQKVVMMNNYSQNWK 63 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNR 128 Y +N+++IDPV+ N S ++W+ + +E + WE A +H L+ G +Q Sbjct: 64 RRYTDENYISIDPVVKHGNKSLMPVVWSSNKITENKNFWEDAYSHNLKYGWSQASADQVG 123 Query: 129 ALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEM-----NFSKR 183 G L+ +R + ELQ ++ L + S + EI+ T +M + R Sbjct: 124 RRGLLTLTRGHEPISELELKELQYRLTWLTQISHHCM----SEIITTKKMPETMITLTMR 179 Query: 184 EKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 EK++LRWTA GKTS E + I++I+E TVNFH N +K+N NKT AA GL+ Sbjct: 180 EKDVLRWTAAGKTSGETSTIMNITERTVNFHIANSMQKLNCINKTSATVRAAMLGLL 236 >UniRef50_Q88E21 Transcriptional regulator, LuxR family n=7 Tax=Pseudomonas RepID=Q88E21_PSEPK Length = 279 Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 78/237 (32%), Positives = 120/237 (50%), Gaps = 10/237 (4%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWV 68 W+ L F + ++++ AQ L+ DY L +R + P++ Y+NYP W+ Sbjct: 48 WKPEYLRAFVSERSPQKLFDIAVHLAQDLDMDYLGLNIRIQIATQTPRLYLYSNYPSEWI 107 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNR 128 YQ +F DP N + S ++W D+L+ EA E A +GLR G TQ L Sbjct: 108 ERYQRDDFYKQDPAANLSHSSTMPVLWTDELYKEAPQFREMACLYGLRHGWTQSLHDQQH 167 Query: 129 ALGFLSFSRCSAREIPILSDELQL-----KMQLLVRESLMALMRLNDEIVMTPEMNFSKR 183 +S +R + PI DE++L +Q L L + + P+ S+R Sbjct: 168 NESQISVARPNG---PI--DEVELYDKAGSVQWLCHTLHAVLGEHHLNALCPPQPKMSER 222 Query: 184 EKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E E+L+W+A GKT+A++A ILS+S++TVNFH +++ K NA NK AA G I Sbjct: 223 ELEVLKWSAAGKTAADVASILSLSQSTVNFHIRSVITKTNAANKAGAIAIAALRGWI 279 >UniRef50_D0B4P5 Transcriptional activator n=39 Tax=Brucellaceae RepID=D0B4P5_BRUME Length = 238 Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 74/228 (32%), Positives = 117/228 (51%), Gaps = 8/228 (3%) Query: 18 QRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFL 77 Q ++A++++ ++ A L ++Y S + P K + +P+ W Y A+N+ Sbjct: 14 QSADSADQLFEIVKNYAHDLGFEYVSYVMSIPSLNGSLKWVRFGAFPDGWEQRYLAQNYA 73 Query: 78 AIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSR 137 IDP+L S L+W+ + F+ A +W A +GL+ G++Q G LSF R Sbjct: 74 EIDPLLRRGVNSIDPLIWSQNFFASAPQIWADAVKYGLKVGISQPCWAAQGVFGLLSFVR 133 Query: 138 C----SAREIPILSDELQLKMQLLVRESLMALMRLN-DEIVMTPEMNFSKREKEILRWTA 192 + EI +L +LQ+ LL L R++ I +++ + RE+EILRWT+ Sbjct: 134 SGPALTPGEISMLRRQLQMVTNLL---HLSMYERVDVPAISCIGDVSLTLREREILRWTS 190 Query: 193 EGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 EGKT+ I IL+IS TVNFH N+ K+ A NK Q A GL+ Sbjct: 191 EGKTAEIIGTILNISTRTVNFHISNVLTKLVAVNKVQAVAKARTFGLL 238 >UniRef50_B2I0W2 DNA-binding HTH domain-containing protein n=9 Tax=Acinetobacter RepID=B2I0W2_ACIBC Length = 238 Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/240 (32%), Positives = 119/240 (49%), Gaps = 11/240 (4%) Query: 8 SWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAW 67 SW+ +L F ++ +++ ++ A +L +DY + ++ P+ PK NYPEAW Sbjct: 3 SWQEDLLSAFLVVKNEYQLFDIVKSIASRLGFDYCAYGMQSPLSIAEPKTIMLNNYPEAW 62 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEA--QPLWEAARAHGLRRGVTQYLML 125 Y + ++ IDP + S L+W+ + WE AR++GL G Q Sbjct: 63 QKRYVEQQYVKIDPTVQHCMVSLQPLVWSSQSAKTQAEKDFWEEARSYGLNVGWAQSSRD 122 Query: 126 PNRALGFLSFSRCSAREIPILSDELQ----LKMQLLVRESLMALMRL-NDEIVMTPEMNF 180 G L+ +R + + LS++ Q M L + ++ ++ ND + Sbjct: 123 FIGTRGMLTLARSNDQ----LSEKEQKAQYTNMYWLTQTVHSSIAKIVNDVEFAKFNLYL 178 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + REKE LRWTAEGKTSAEIA IL ++E TVNFH N +K+N NK A A GL+ Sbjct: 179 TNREKEALRWTAEGKTSAEIAQILGVTERTVNFHLSNSMQKLNVNNKISAAIRAVMLGLL 238 >UniRef50_C4I3H7 Autoinducer-binding transcriptional regulator, LuxR family n=22 Tax=Burkholderia RepID=C4I3H7_BURPS Length = 236 Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 15/234 (6%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQA 73 L F R E + V + A L Y+Y + +R P P + P + +NYP W Y Sbjct: 11 LNEFSRSENPQHVISVLTRAAATLGYEYAAYGMRRPFPISNPPILMVSNYPARWQERYIE 70 Query: 74 KNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFL 133 F ID + S + W+ + W A + G+ G + + A+G L Sbjct: 71 ARFANIDGAVKAALGSDRPVTWSAPANASKSAFWAEALSFGIAHGWSSASRGADGAIGVL 130 Query: 134 SFSRCSAREIPILSDELQLKMQLLVR-------ESLMALMRLNDEIVMTPEMNFSKREKE 186 + SR + PI + E + + + +V S+ + DE + + ++RE + Sbjct: 131 TLSRT---QDPIDTAE-KFRNESIVHWLANVAHASMAPFLPAADEF----DPDLTRRETD 182 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +L+WTA+GKT+ EIA+ILSISE+TVNFH KN+ K+ + NK Q AA G++ Sbjct: 183 VLKWTADGKTAYEIALILSISESTVNFHVKNIVSKLGSTNKIQAVAKAALMGML 236 >UniRef50_C5ANM9 DNA-binding HTH domain-containing protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5ANM9_BURGB Length = 235 Score = 110 bits (274), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 66/224 (29%), Positives = 112/224 (50%), Gaps = 7/224 (3%) Query: 21 ETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAID 80 +++ V+ ++ A QL +DY R P+P V + NYP W+ +Y+ ++ +D Sbjct: 15 DSSRVVFDKLVGYASQLGFDYCCYGFRSPLPVGGESVKVFDNYPNGWMEHYRHMGYIDVD 74 Query: 81 PVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSA 140 P + + W S+ W+ AR HGL+ G+ Q A G LS +R Sbjct: 75 PTVEKAMTCSQTICWPGFDESKQSAFWQDARDHGLKVGIAQPSWSARGAFGLLSLAR--- 131 Query: 141 REIPILSDELQ-LKMQL-LVRESLMALMRLN--DEIVMTPEMNFSKREKEILRWTAEGKT 196 E I EL+ L +QL + ++ + M + D + + ++ ++RE+++LRWT EG Sbjct: 132 GEGEIDGHELKRLSLQLSWITNAVHSAMTAHVFDSLGLGAAISLTERERQVLRWTVEGLN 191 Query: 197 SAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + +I+ L+IS +TVN+H + K A NK Q A A A L+ Sbjct: 192 AFDISEKLNISVSTVNWHIGKVLAKFGATNKVQAAARAVALNLL 235 >UniRef50_B6VM55 Similar to probable transcription regulator SdiA of Escherichia coli n=3 Tax=Photorhabdus RepID=B6VM55_PHOAA Length = 242 Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 72/248 (29%), Positives = 120/248 (48%), Gaps = 32/248 (12%) Query: 12 TMLLRFQRMETAEEVYHEI-ELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 T+ +F ++ E+ E+ + + +SL ++ P + +V F+ NY E+W + Sbjct: 8 TLPYKFHELDVDAHFVSEVFEIINKISGFSLFSLILKARFPISNREVYFFNNYHESWRNL 67 Query: 71 YQAKNFLAIDPVLN----PENFSQGHLMWNDDLFSE--AQPLWEAARAHGLRRGVTQYLM 124 Y + + IDP LN P +FS+ +W+ D FSE Q LW ++ HG R G+T L Sbjct: 68 YIERKYWMIDPTLNFRPVPPSFSK---IWDLDFFSESNGQELWYVSQKHGFRSGITFGLP 124 Query: 125 LPNRALGFLSFS------------RCSAREIPILSDELQLKMQLLVRESLMALMRLNDEI 172 + G S + +CS IL +++ L + ++ Sbjct: 125 AFSGTYGIFSVAGKDGHIDNETMYKCSGE---ILGVYIRIIRYLTSHTKYLQFFYVD--- 178 Query: 173 VMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVAC 232 E +FS RE E+LR+TA+G TS+EIA+ + ++++TV+FH N+ KK+ NK Q Sbjct: 179 ----ETSFSNRELEVLRYTADGMTSSEIALTICVTKSTVDFHLMNIVKKLGCRNKFQAIA 234 Query: 233 YAAATGLI 240 A G I Sbjct: 235 KAVLLGYI 242 >UniRef50_Q3Y8H6 PpuR n=3 Tax=Pseudomonas putida RepID=Q3Y8H6_PSEPU Length = 238 Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 65/217 (29%), Positives = 117/217 (53%), Gaps = 5/217 (2%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQA 73 LLR ME E+ +++ ++L Y + + ++ +V Y++YP+AW + Y A Sbjct: 9 LLRLSEMERFEDWLAHLKILTRKLGYSNFLIGLKPAPTDANQQVLIYSDYPDAWRTRYDA 68 Query: 74 KNFLAIDPVLNPENFSQGHLMWNDDLF---SEAQPLWEAARAHGLRRGVTQYLMLPNRAL 130 +++ A+DPV+ + L+W+ D + SE++ +E A AHGL++G+ L P Sbjct: 69 ESYAAVDPVVQHCLNANRPLLWDRDNYRRPSESE-FFEEAAAHGLQQGLALPLHGPRGEA 127 Query: 131 GFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRW 190 G L + + L M L+R+ M M L I + ++ + REKE+L+W Sbjct: 128 GMLCLKPFESGPRATATMIESLPMATLLRDYAMEGM-LKARIECSTPVHLTSREKEVLQW 186 Query: 191 TAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNK 227 +A GKT+ EI+MILS + + ++FH KN+++K ++ Sbjct: 187 SAAGKTTWEISMILSCTTSAIDFHFKNIRRKFQVSSR 223 >UniRef50_A0KHA7 Transcriptional activator protein AhyR/asaR n=2 Tax=Aeromonas hydrophila RepID=A0KHA7_AERHH Length = 264 Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 22/220 (10%) Query: 34 AQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHL 93 + ++ +DY+ L + P RP V + P+AWV Y + F AIDP++ + Sbjct: 38 SGRMGFDYFRLALIFPSTIQRPDVIIFNGCPQAWVDTYTSSGFFAIDPIVKCAMTKSTPI 97 Query: 94 MWNDDLFSE------AQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSARE----- 142 +W D + E + + + A +G+ G+T N +G LSF + R Sbjct: 98 LWADVVNDEERCDEQGREMMQLANEYGICDGITLPWHGANGHVGLLSFITSTPRTQQQWL 157 Query: 143 --IPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEI 200 +P +S L M + + + L L +P S RE E+ RW AEGK ++I Sbjct: 158 SAVPFIS---WLSMHIFEAVARVCLAGL------SPHDALSLRELEVCRWAAEGKQVSDI 208 Query: 201 AMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 A IL I+ TV FH N+ K+ A +K+Q +A G++ Sbjct: 209 AQILGITPRTVTFHLNNVVSKLGASSKSQAISWALKQGMV 248 >UniRef50_A8GCU6 Transcriptional regulator, LuxR family n=2 Tax=Serratia RepID=A8GCU6_SERP5 Length = 238 Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 14/199 (7%) Query: 34 AQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHL 93 AQ L ++Y+S V P +RPK+ N+PE ++ Y+ DPV+ + S Sbjct: 30 AQALGFEYFSYTVFSCYPASRPKMLIEGNFPECYLEDYRKLRVYLQDPVIEQAHHSTLQF 89 Query: 94 MWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQ-- 151 W++ + + LW G+R G +Q + LG L+F+ + IP+ S + Sbjct: 90 YWDEHFYQDKPELWWRMAQFGIREGWSQSVKDCYGRLGILTFA---GKSIPVQSPQASAR 146 Query: 152 -----LKMQLLVRESLM-ALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILS 205 L + +V ++L AL+ +NDE + + REK+ILRW +EGKTS E A+++ Sbjct: 147 NETFFLWLAQMVHKTLREALISVNDEAIKDV---LTLREKDILRWCSEGKTSEETALLMG 203 Query: 206 ISENTVNFHQKNMQKKINA 224 +SE TVNFH N KK++ Sbjct: 204 LSERTVNFHIGNSIKKLSV 222 >UniRef50_P35327 Transcriptional activator protein luxR n=26 Tax=Vibrionaceae RepID=LUXS_VIBF1 Length = 250 Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 100/214 (46%), Gaps = 10/214 (4%) Query: 34 AQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHL 93 A+ + +YY + +P +P V+ NYPE W YY L DPV++ + Sbjct: 33 AKIIHCEYYLFAIIYPHSIIKPDVSIIDNYPEKWRKYYDDAGLLEYDPVVDYSKSHHSPI 92 Query: 94 MWN----DDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDE 149 WN + E+ + + A+ GL G + + + G LSF+ + I +D Sbjct: 93 NWNVFEKKTIKKESPNVIKEAQESGLITGFSFPIHTASNGFGMLSFAH---SDKDIYTDS 149 Query: 150 LQLKMQLLVRESLMALMRLNDEIVMTPEMN---FSKREKEILRWTAEGKTSAEIAMILSI 206 L L V L +L+ +I T + + +KREKE L W +EGK++ +I+ IL Sbjct: 150 LFLHASTNVPLMLPSLVDNYQKINTTRKKSDSILTKREKECLAWASEGKSTWDISKILGC 209 Query: 207 SENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 SE TV FH N Q K+N N+ Q A TG I Sbjct: 210 SERTVTFHLTNTQMKLNTTNRCQSISKAILTGAI 243 >UniRef50_B2UGC8 Transcriptional regulator, LuxR family n=1 Tax=Ralstonia pickettii 12J RepID=B2UGC8_RALPJ Length = 253 Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 63/184 (34%), Positives = 92/184 (50%), Gaps = 2/184 (1%) Query: 59 FYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWN-DDLFSEAQPLWEAARAHGLRR 117 ++ YP +W+ YQ +A DPV+ S + W+ DDL + P+++ AR HGL Sbjct: 68 IFSTYPASWIRRYQEAGHVAADPVVKLITTSNLPIHWDADDLQAARSPVFDEAREHGLAT 127 Query: 118 GVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLM-ALMRLNDEIVMTP 176 G+T + + S + A E + + +L L A+ RL+ + P Sbjct: 128 GITIPINGFDHTRALFSVTSDQAPERSQRHTDAISGLAVLTALHLHEAVRRLDASMSNAP 187 Query: 177 EMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAA 236 + + REKE L+W A GKTS EIA ILS+SE TV FH N KK+ A N+ Q A + Sbjct: 188 IPSLTSREKECLQWAAAGKTSWEIARILSVSERTVIFHIGNATKKLGATNRRQAVARAIS 247 Query: 237 TGLI 240 LI Sbjct: 248 LRLI 251 >UniRef50_B2JQL2 Transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=B2JQL2_BURP8 Length = 234 Score = 96.3 bits (238), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 68/201 (33%), Positives = 100/201 (49%), Gaps = 13/201 (6%) Query: 49 PVPFTRPKVAFY-TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSE--AQP 105 P P R + AF + Y W +Y + F IDP + L+W+ DLF AQ Sbjct: 35 PRPGMRLEDAFIRSTYSPTWRQFYNEQGFAHIDPTVAHCMTKSSPLIWSPDLFDTYPAQT 94 Query: 106 LWEAARAHGLRRGVTQYLMLPNRALGFLSF------SRCSAREIPILSDELQLKMQLLVR 159 ++E ARAHGLR GV+ + P + G + F S R + ++ L L L++ Sbjct: 95 MYEEARAHGLRAGVSLPIHGPRQESGLICFVNDHNPSDDFWRHLDVVLPNLVLLRDLVID 154 Query: 160 ESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQ 219 S L +V P++ + RE+E L+WTA GK++ EI+ IL+ SE VNFH KN++ Sbjct: 155 TSQPHLNTHTQALV--PKL--TPREQECLKWTARGKSTWEISHILNCSEAVVNFHLKNIR 210 Query: 220 KKINAPNKTQVACYAAATGLI 240 K ++ A A GLI Sbjct: 211 TKFGVNSRRAAAVIATQLGLI 231 >UniRef50_P0A3J5 Transcriptional activator protein ahyR/asaR n=89 Tax=Bacteria RepID=AHYR_AERHY Length = 260 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 107/221 (48%), Gaps = 27/221 (12%) Query: 37 LEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWN 96 + YDYY + P+ RPKV + P++WV Y A + LA DP++ + WN Sbjct: 33 MGYDYYRFALIIPMSMQRPKVVLFNQCPDSWVQAYTANHMLACDPIIQLARKQTLPIYWN 92 Query: 97 DDLFSEAQPLWEA-------ARAHGLRRGVTQYL---MLPNRALGFLSFSRCSAREI--- 143 L A+ L E A GLR G++ L N L F++ R S+ + Sbjct: 93 R-LDERARFLQEGSLDVMGLAAEFGLRNGISFPLHGAAGENGILSFITAERASSDLLLES 151 Query: 144 -PILSDELQLKMQLLVRESLMALMRLN---DEIVMTPEMNFSKREKEILRWTAEGKTSAE 199 PILS M + E+ + ++R++ D+ P+ + RE E L W +EGKTS E Sbjct: 152 SPILS-----WMSNYIFEAAIRIVRVSLREDD----PQEALTDRETECLFWASEGKTSGE 202 Query: 200 IAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 IA IL I+E TVN+H + +K + N+ Q ++G++ Sbjct: 203 IACILGITERTVNYHLNQVTRKTGSMNRYQAIAKGVSSGIL 243 >UniRef50_A0AX00 Transcriptional regulator, LuxR family n=6 Tax=Burkholderia RepID=A0AX00_BURCH Length = 237 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 73/228 (32%), Positives = 103/228 (45%), Gaps = 8/228 (3%) Query: 17 FQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNF 76 QR TAE + I A L + Y +R +P RP + N+P W Y + Sbjct: 13 LQRAPTAEAAFPPIAAAAAALGFRYCVYGLRRTLPLARPDLQIVGNHPREWEHRYVKFGY 72 Query: 77 LAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFS 136 + IDP++ ++WN W A G+R G + LG L+ Sbjct: 73 VTIDPIIKRVASQPRPVVWNAFDEPGDTAFWHDAACFGMRYGWSHGGYDRAGNLGVLTLV 132 Query: 137 RCSAREIPILSDE---LQLKMQLLVRESLMALM-RLNDEIVMTPEMNFSKREKEILRWTA 192 R + P+ +DE L+ L + LM RL D I + RE+E+L WTA Sbjct: 133 RDTT---PLDADEISRLRAPCASLAHAAHAYLMPRLADPIAPV-GTGLTLREREVLAWTA 188 Query: 193 EGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +GKT+ EI MI I+E TV FH +N K++A NKT A AA GL+ Sbjct: 189 DGKTAYEIGMIFGIAERTVKFHLQNAVVKLDAMNKTHAATKAAMLGLL 236 >UniRef50_Q13KP8 Transcriptional regulator, LuxR family n=3 Tax=Burkholderia RepID=Q13KP8_BURXL Length = 234 Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 66/206 (32%), Positives = 102/206 (49%), Gaps = 23/206 (11%) Query: 49 PVPFTRPKVAFY-TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEA--QP 105 P P R + A+ + Y W Y + + IDP ++ L+W+ D+F+ A Q Sbjct: 35 PRPTIRLEDAYVRSTYSPIWRRTYDEQGLVHIDPTVSHCATRATPLIWSPDIFTTAPQQS 94 Query: 106 LWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMAL 165 ++E ARAHGLR GVT + PN+ G + F S +DE + + +L L Sbjct: 95 MYEEARAHGLRAGVTLPIHGPNQEAGMMCFVNDSNP-----NDEFWQHINV----ALPNL 145 Query: 166 MRLNDEIVMTPEMNF-----------SKREKEILRWTAEGKTSAEIAMILSISENTVNFH 214 + L D ++ T + + + RE+E L+WTA GK++ EI+ IL+ SE VNFH Sbjct: 146 VLLRDLVIDTSQRHLNTHAQTLLPKLTPRERECLKWTARGKSTWEISHILNCSEAVVNFH 205 Query: 215 QKNMQKKINAPNKTQVACYAAATGLI 240 KN++ K ++ A A GLI Sbjct: 206 MKNIRTKFGVNSRRAAAVIATQLGLI 231 >UniRef50_A6UE86 Regulatory protein LuxR n=4 Tax=Rhizobiales RepID=A6UE86_SINMW Length = 246 Score = 93.6 bits (231), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 112/247 (45%), Gaps = 23/247 (9%) Query: 12 TMLLRF----QRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRP-KVAFYTNYPEA 66 T+L++F + M+T EE+ E E + +D+Y VR P P P ++ +PE Sbjct: 4 TLLVQFLALLEEMKTREEILPEFERLLDRCGFDFYG-VVRQPKPHENPLRLLLAGRWPEG 62 Query: 67 WVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFS--------EAQPLWEAARAHGLRRG 118 W Y K ++ IDP + +Q W D L + + + AR HGL G Sbjct: 63 WPQIYIRKKYVVIDPTIRFLGHAQRGFRWRDTLVAFRSDPHRKRMESMMIEARNHGLFDG 122 Query: 119 VTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLND-----EIV 173 Y+ + G + R + + EL L + + L+ L D E+V Sbjct: 123 ---YIFPVHGRRGLMGNLTVGGRVVDLSPVELSL-FDAIAKRLFWKLLELTDPEIMAELV 178 Query: 174 MTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 E+ ++RE E L + A+G TS +I +L IS +TV+++ +Q+K+ A N+ V Sbjct: 179 SRVEVQMTRREMEALHYLADGMTSNDIGKVLDISSHTVDWYMNGIQEKLKAKNRHHVVAL 238 Query: 234 AAATGLI 240 A GLI Sbjct: 239 AFRLGLI 245 >UniRef50_C3K2E5 Putative LuxR-family regulatory protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K2E5_PSEFS Length = 236 Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 102/234 (43%), Gaps = 1/234 (0%) Query: 7 FSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEA 66 +WR T L + + V+ + Q +L + Y S + V + +TNYP+ Sbjct: 2 LNWRNTRLPKLEGENEITSVFEMVINQTYELGFQYCSFKMSSQVSENQTNPIEFTNYPKE 61 Query: 67 WVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLP 126 W + Y + +DPV+ ++W LF +A LW A+ + TQ + Sbjct: 62 WTTVYNQARYFDVDPVVKHCKRCVLPVVWEGTLFKDAPSLWSLAQTLNVNVAWTQAVHDF 121 Query: 127 NRALGFLSFSRCSAREIPI-LSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREK 185 L+ SR + P+ L ++ + L + + + P + RE Sbjct: 122 QGVFSMLTLSRGTDDVSPVELYEKAGHVLWLCHAMHAVVAQKYAGKPSALPPSKLTPRET 181 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 EIL+W+A GKT+++IA IL +SE TV FH + KK+ NK A+ GL Sbjct: 182 EILKWSAMGKTASDIATILCLSERTVGFHISSTFKKLGVNNKIAAVLCASKAGL 235 >UniRef50_C4RYA9 Transcription regulator SdiA n=1 Tax=Yersinia bercovieri ATCC 43970 RepID=C4RYA9_YERBE Length = 238 Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 10/231 (4%) Query: 17 FQRMETAEEVYHEIE-LQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKN 75 F R++ +EE +I + ++S +R P T ++ + NY ++W + Y+ Sbjct: 11 FNRIDVSEETLQQISNYITLNTGFSFFSFVIREIYPITESRIYTFDNYNDSWRTLYEKNK 70 Query: 76 FLAIDPVLNPENFSQ-GHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLS 134 IDPV+ + Q + +W+ F + +W +G + G+T + LP LS Sbjct: 71 LWKIDPVIFYKPMPQLEYAVWDSLFFKGHEEIWAYGVEYGYQSGITFGMPLPQGYHSILS 130 Query: 135 FSRCSAREIPILSDELQLKMQLLVRESLMAL--MRLNDEIVMTPEMN---FSKREKEILR 189 S S P E+ L + + + + LN E +T N +KRE IL Sbjct: 131 LSNMSHSITP---KEISLAQSYFSKICVKIINSIILNAESPITFNKNNITLTKRELMILM 187 Query: 190 WTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 ++ +G TS EIA + IS++TV+FH N+ KK+N NK Q A GLI Sbjct: 188 FSVDGMTSHEIAGKIFISKSTVDFHMLNIIKKLNCKNKFQAISKALIMGLI 238 >UniRef50_A7KC31 Transcriptional activator protein n=1 Tax=Pseudomonas corrugata RepID=A7KC31_9PSED Length = 242 Score = 93.2 bits (230), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 63/230 (27%), Positives = 102/230 (44%), Gaps = 21/230 (9%) Query: 22 TAEEVYHEI-ELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAID 80 +EE Y EI +L + ++ P PF K++ Y+NYP WV Y+ + D Sbjct: 23 VSEEEYTEILGWIFSRLGIEKFAYVHLEPTPFNNSKISIYSNYPSEWVDTYRKNSLYKSD 82 Query: 81 PVLNPENFSQGHLMWND--DLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRC 138 PV+ + WN+ +++ + ++G+++G T + P RA G L S Sbjct: 83 PVMANTAITATPFFWNEIPAEIDNNPEIFDQSASYGIKQGYTVPIHEPGRAFGSLHLS-- 140 Query: 139 SAREIPILSDELQLKMQLLVRESLMALMRLND--------EIVMTPEMNFSKREKEILRW 190 S+E ++VR +L + L+ E + + S RE E LRW Sbjct: 141 --------SEENDPDFPIIVRSNLFIIKTLSVIANQYRPMETTIESNLKLSPREIEFLRW 192 Query: 191 TAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 A GK EI +I++I+E TV FH K M +K++ N Q A + Sbjct: 193 LALGKNYKEIGLIMNITERTVKFHAKQMTEKMDCTNVKQAMIKAVQLNFV 242 >UniRef50_UPI00018738D8 transcriptional activator of quorum sensing autoinducer synthesis transcription regulator protein n=1 Tax=Pseudomonas syringae pv. tomato T1 RepID=UPI00018738D8 Length = 185 Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/183 (32%), Positives = 87/183 (47%), Gaps = 7/183 (3%) Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQ 121 NY W YQ NF+ DP L S ++W++D F + L+ + L G Q Sbjct: 6 NYDPQWNENYQIHNFVESDPTLQHGFKSNEPMLWSEDTFKDHTLLYGEMKKFNLNYGWLQ 65 Query: 122 YLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMN-- 179 + A G ++ SR + D + KM LVR + L + I ++P N Sbjct: 66 SSWYNSAAKGVVTLSRSTEAITLKELDAKEAKMSKLVRLTHACLSEI---ITLSPPYNPL 122 Query: 180 --FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAAT 237 S RE E+L+W A+GKT I +L ++E TV H N+ +K+NA NKT A AA Sbjct: 123 EKLSTREVEVLKWVADGKTGEVIGKVLGVTERTVTHHTVNIMQKLNATNKTAAAVKAALL 182 Query: 238 GLI 240 G+I Sbjct: 183 GII 185 >UniRef50_P55629 Putative HTH-type transcriptional regulator y4qH n=4 Tax=Rhizobiales RepID=Y4QH_RHISN Length = 326 Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 10/185 (5%) Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQP------LWEAARAHGL 115 NYP+ W + I PV+ G + W+D ++S+A +++ A GL Sbjct: 144 NYPDGWRERCLEMGYETIAPVIKESRMGAGPIRWSD-MYSDASTTEYERRMFDEAAMFGL 202 Query: 116 RRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT 175 R G+T L P + +SF+R RE D +QL + + ++ + + Sbjct: 203 RSGITVPLRGPRGSCAIMSFARHCERE---FHDRTIAYLQLAATHFHLRVAKIANLNAVQ 259 Query: 176 PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 S REKE + W A GK+S +I +I+ ISENTVNFH KN+ +K+ ++T A A Sbjct: 260 KIPALSLREKECVLWVARGKSSWDIGVIMRISENTVNFHIKNVMRKLGTSSRTVAAIKAI 319 Query: 236 ATGLI 240 + G+I Sbjct: 320 SLGII 324 >UniRef50_UPI00016A49A6 transcriptional regulator, LuxR family protein n=1 Tax=Burkholderia oklahomensis C6786 RepID=UPI00016A49A6 Length = 238 Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 68/232 (29%), Positives = 105/232 (45%), Gaps = 18/232 (7%) Query: 21 ETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAID 80 +T +++ + A +L +DY+ + V +NYP AW Y++ ++ ID Sbjct: 13 KTERDIHDILSRIAARLGFDYFFYGTLSDMRKPENPVKTVSNYPMAWQEKYKSSGYIRID 72 Query: 81 PVLNPENFSQGHLMWNDDLFS--EAQPLWEAARAHGL----------RRGVTQYLMLPNR 128 PV+ L WND + E + E AR HGL R G L L +R Sbjct: 73 PVVRHCGHRLIPLQWNDGICHCREQRNFMEDARGHGLVAGASFPVHSRHGEVSILSLASR 132 Query: 129 ALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEIL 188 + G + SA+ P + L VRE + R+++ P + RE E L Sbjct: 133 SAG--GTTSLSAKHAPATFAQGALAAAF-VRE---GMERISNRPDHEPSAPLTHRELECL 186 Query: 189 RWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +W A GK+S EIAMIL ISEN V +H K + K + ++ A A+G++ Sbjct: 187 KWIAAGKSSWEIAMILGISENGVLYHVKKLMAKFDVQSRHLAVLKAMASGVV 238 >UniRef50_C3KBP0 Putative LuxR-family regulatory protein n=2 Tax=Pseudomonas RepID=C3KBP0_PSEFS Length = 235 Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 95/195 (48%), Gaps = 11/195 (5%) Query: 51 PFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSE---AQPLW 107 PF R T YP W+ Y+ +NF+ +DP++ L W W Sbjct: 45 PFNR----IMTTYPSDWLKRYKDENFIQVDPIIRHCRHHFAPLFWGRARLKARGCTNRFW 100 Query: 108 EAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQ--LKMQLLVRESLMAL 165 + +GL RGV+ L N G L+ ++C + + L+D+L L M ++ L+ Sbjct: 101 KEREGYGLLRGVSIPLRF-NEMAGSLNVAQCVS-DTDELADDLNGPLGMLFMLIPFLLEG 158 Query: 166 MRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAP 225 + + + V P + + RE E+L+WT GKT+ E++ IL SE T+NFH N +K+ + Sbjct: 159 SQKHLKTVGEPPSSLTLRESEVLKWTGVGKTTWEMSCILGCSERTINFHIANASRKLGSF 218 Query: 226 NKTQVACYAAATGLI 240 ++ Q A A GLI Sbjct: 219 SRRQAVGVALAQGLI 233 >UniRef50_A0ZSG9 LuxR n=1 Tax=Shewanella hanedai RepID=A0ZSG9_SHEHA Length = 243 Score = 89.4 bits (220), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 10/214 (4%) Query: 34 AQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHL 93 A L+ +YY + +PV + + NYP W YY + + DP+++ + + Sbjct: 28 ALLLDCEYYLFAILNPVSIFKSDLYILDNYPSCWKKYYNDEKLIDYDPIIDYSASNYAPI 87 Query: 94 MWNDDLFSEAQ------PLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPI-L 146 +W+ + +++ + E A+ L+ G + + N + G +SF+ + + I L Sbjct: 88 IWS--MLEQSKWDKNKTNVIEEAKNSNLKSGFSFPVHTKNNSFGVISFANSNNEKTLISL 145 Query: 147 SDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSI 206 + L++ E L + R+N I T + REKE L W +EGKT+ EI+ IL Sbjct: 146 HSNSYSYVLLVLPELLDSHQRINKNIGNTCTQ-LTPREKECLAWISEGKTTWEISKILDC 204 Query: 207 SENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 SE TV+FH N+Q K+ N++Q + TG++ Sbjct: 205 SERTVSFHITNLQTKLGTNNRSQSISKSILTGVM 238 >UniRef50_A4BB65 LuxR, transcriptional regulator n=1 Tax=Reinekea blandensis MED297 RepID=A4BB65_9GAMM Length = 240 Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 69/241 (28%), Positives = 105/241 (43%), Gaps = 20/241 (8%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQ 72 +L R Q+ ++ E+ +E +Q +E+DY+ + P T + Y NYP W Y Sbjct: 3 LLERLQQAQSTSELPEILESISQVVEFDYFLFGLALPNSITHSDILMYDNYPGEWRRVYD 62 Query: 73 AKNFLAIDPVLNPENFSQGHLMWN------DDLFSEAQPLWEAARAHGLRRGVTQYLMLP 126 + DP++ + + W S+ + +WEA A GL+ G + + Sbjct: 63 ESGYAKRDPIVQYSISNYMPVTWAQISESPSYSRSDLKIMWEA-EASGLKAGFSLPIHGA 121 Query: 127 NRALGFLSFSRCSAREIPILSDELQLK-------MQLLVRESLMALMRLNDEIVMTPEMN 179 G +SF+ +DE +LK +Q+LV A+ RL P Sbjct: 122 VGEFGMISFASNHN------TDEQRLKYAEAIPVIQMLVPAIQDAVKRLRVSESKEPPAK 175 Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 +KRE E L W EGK+S EI+ IL SE T FH N K+ A N+ Q A G+ Sbjct: 176 LTKREIECLTWATEGKSSWEISQILGCSERTAIFHLSNAANKLGATNRYQAISKALLCGI 235 Query: 240 I 240 I Sbjct: 236 I 236 >UniRef50_Q2T4M4 Autoinducer-binding transcriptional regulator, LuxR family, putative n=3 Tax=Burkholderia thailandensis RepID=Q2T4M4_BURTA Length = 238 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 114/247 (46%), Gaps = 31/247 (12%) Query: 10 RRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVS 69 R + R + +A + + + + +L + + + + P+P TR + ++NYP Sbjct: 5 REQFVRRMRASRSAGDAFDVVLQRGTELGFQFCAYRLTAPIPITRRRTFVWSNYP----- 59 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWNDD------------LF-SEAQPLWEAARAHGLR 116 N A PVL+ + +G + D +F S A LW G+R Sbjct: 60 -----NACAASPVLDADRSGRGA---DTDAQACGVTADATQVFESMADGLWAETSDQGVR 111 Query: 117 RGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKM---QLLVRESLMALMRLNDEIV 173 G + A+G L F+R + + D+++ +M L +++ +LMR DE + Sbjct: 112 YGWALSVRDRWGAVGTLKFARGTREIVQEELDDIEPEMIWLAHLAHDTIGSLMR--DETI 169 Query: 174 MTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 S E++IL WTAEGKT +EI+ IL +S +NFH +N+ K+ A NKT A Sbjct: 170 PGEIARVSLVERQILLWTAEGKTVSEISSILQMSVRNINFHIQNVVGKLGATNKTHAAVK 229 Query: 234 AAATGLI 240 A GLI Sbjct: 230 ATLVGLI 236 >UniRef50_A4U2E2 Regulatory protein, LuxR:Autoinducer-binding n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U2E2_9PROT Length = 242 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 95/187 (50%), Gaps = 9/187 (4%) Query: 58 AFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND--DLFSEAQPLWEAARAHGL 115 A +YPE W YY KN++ IDPV+ + W+ DL + + +++ A GL Sbjct: 59 AVVVDYPEEWQKYYFEKNYVTIDPVITRACQAYVPYRWDQLRDLTNPQKRMFKEATEAGL 118 Query: 116 RRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQL--KMQLLVRESLMALMRLNDEIV 173 R G+T + PN ++ F++ +I D L+ +LV + L+ + Sbjct: 119 RHGITVPVHGPNGSI-FVASVASPHTDI----DHLRSLSVANVLVTQVYSVLVGMRHPGA 173 Query: 174 MTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 + ++ + RE+E L W+A GK+S +I +IL+IS+NTVNFH KN K+ A + Sbjct: 174 PSAPVSLTARERECLIWSARGKSSWDIGVILNISDNTVNFHLKNAMGKLKASTRVLAIVK 233 Query: 234 AAATGLI 240 A GLI Sbjct: 234 AIRMGLI 240 >UniRef50_Q0B5I4 Transcriptional regulator, LuxR family n=1 Tax=Burkholderia ambifaria AMMD RepID=Q0B5I4_BURCM Length = 229 Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 99/186 (53%), Gaps = 11/186 (5%) Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLF--SEAQPLWEAARAHGLRRG 118 +NYPEAW+S Y+ + +L IDP+ S L+W D +F +E + + R +GL G Sbjct: 49 SNYPEAWLSLYRDRAYLTIDPIAQHALSSLMPLIWGDRIFATTEQREFRDEGRIYGLNDG 108 Query: 119 VTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLND----EIVM 174 V+ + + +SF R AR + D+ + + +L+A + L+ E V Sbjct: 109 VSFPAHSRHGDVACVSFVR-QARAL----DDGDMPCDVPSWGALVANLMLDACRRLEAVQ 163 Query: 175 TPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 + S RE EIL+W AEGK++ +I+ I+S++E+ V H +++ KK + P + Q A Sbjct: 164 SDAPCLSTRELEILKWVAEGKSTWDISRIVSLTEHGVLHHIRSIMKKFDVPTRRQAVLMA 223 Query: 235 AATGLI 240 + GL+ Sbjct: 224 SRFGLL 229 >UniRef50_A0KQW9 Transcriptional activator protein AhyR/asaR n=2 Tax=Aeromonas RepID=A0KQW9_AERHH Length = 203 Score = 86.7 bits (213), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 48/225 (21%) Query: 16 RFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKN 75 RF + + ++ ++E + Q+ +DY+ L + P+ + VA + N P +W Y ++ Sbjct: 12 RFTKAKKTSDIQQQLERFSHQMGFDYFRLLIIFPISMQKSHVALFNNCPTSWFDAYSERH 71 Query: 76 FLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSF 135 +L DPV+ +L L F + Sbjct: 72 YLTQDPVV--------------------------------------FLGLKQTQPIFWNK 93 Query: 136 SRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGK 195 C + +P S +QL+ +S LM+ E+ S REKE L W +EGK Sbjct: 94 LDCDSPWLPSASYIFNSALQLI--KSRPDLMKYLTEL--------SDREKECLFWASEGK 143 Query: 196 TSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 TS EIA IL ISE TVNFH + K ++ N+ Q + ++G+I Sbjct: 144 TSWEIATILGISERTVNFHLNQVTNKTDSKNRNQAIAKSISSGII 188 >UniRef50_Q2T3H4 Autoinducer-binding transcriptional regulator, LuxR family n=29 Tax=pseudomallei group RepID=Q2T3H4_BURTA Length = 425 Score = 86.7 bits (213), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 14/225 (6%) Query: 24 EEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVL 83 + ++ + +QL + ++ RH + +P W Y A ++L+IDPV+ Sbjct: 207 KSLFEQTAYHVRQLGFKNFAY--RHQISGAASSRCMLDGFPTEWRLRYDAADYLSIDPVV 264 Query: 84 NPENFSQGHLMWNDDLFS--EAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAR 141 L+W+D+L++ A+ + + A+++GL G++ + + A+ LS A Sbjct: 265 QHCRCRTVPLIWHDELYTTGRAKLMRDEAKSYGLVYGLSCPVHDRSGAISMLSM----AT 320 Query: 142 EIPILSDELQLKMQLLVRESLMALMR------LNDEIVMTPEMNFSKREKEILRWTAEGK 195 + P D + L + + L + + L+ + + + RE+E L+W GK Sbjct: 321 DDPFEHDANDILRLLSLSQLLASFVHAAMHELLDCRLRRQGSCDLTARERESLQWAGRGK 380 Query: 196 TSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 T+ EI+ IL ISE TV FH N +KI A N+ Q A+A GLI Sbjct: 381 TAWEISKILGISERTVVFHLSNAARKIGANNRAQAVVIASARGLI 425 >UniRef50_Q46967 Transcriptional activator protein echR n=100 Tax=Enterobacteriaceae RepID=ECHR_ERWCH Length = 250 Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 101/219 (46%), Gaps = 20/219 (9%) Query: 36 QLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMW 95 L+Y Y + + P V +NYP WV Y++ N+ IDPV+ W Sbjct: 28 DLKYAYLIMNKKKPT-----DVVIISNYPSEWVEIYRSNNYQHIDPVILTAINKISPFSW 82 Query: 96 NDDLFSEAQ----PLWEAARAHGLRRGVTQYLMLPNRALGFLSF----SRCSAREIPILS 147 +DDL ++ ++ ++ + + G T L P L LSF +R E + + Sbjct: 83 DDDLVISSKLKFSRIFNLSKEYDIVNGYTFVLHDPGNNLATLSFMFEENRSGELEEIVQN 142 Query: 148 DELQLKMQLL-VRESLMALMR-----LNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIA 201 ++ +L+M L+ E L +L R N+ P + FS+RE EIL W + GKT EIA Sbjct: 143 NKEKLQMLLISAHEKLTSLYREMSKNKNNSKSQEPNI-FSQRENEILYWASMGKTYQEIA 201 Query: 202 MILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +IL I+ +TV FH N+ KK+ N LI Sbjct: 202 LILGITTSTVKFHIGNVVKKLGVLNAKHAIRLGVEMNLI 240 >UniRef50_A9HQR0 Putative transcriptional regulator, luxR family n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HQR0_GLUDA Length = 239 Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 6/181 (3%) Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGLRRGV 119 YP+AW+ +Y + +L IDP + S W D+ + + ++ G++ G+ Sbjct: 61 TYPDAWLKHYHERKYLDIDPTIVNAGRSYVPYRWEALQDISVKQRQMFLDIAETGIKGGI 120 Query: 120 TQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMN 179 T L P+RA SF+ A + D + + + + L +L++ + P Sbjct: 121 TMSLHTPDRAAFVTSFAFTKA----VSEDRDLVALGFINSQYYETLSKLSEAELPGPVPT 176 Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 FS+REKE L W + GKT+ +I++IL ISENT+N + KN+ K+ + Q A L Sbjct: 177 FSRREKECLLWVSRGKTTWDISVILGISENTINAYLKNVILKLGCSGRIQAVLRAIDLNL 236 Query: 240 I 240 I Sbjct: 237 I 237 >UniRef50_Q39VH7 Transcriptional regulator, LuxR family n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39VH7_GEOMG Length = 246 Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 17/187 (9%) Query: 62 NYPEAWVSYYQAKNFLAIDPVL-------NPENFSQGHLMWNDDLFSEAQPLWEAARAHG 114 +YPE W+S Y +F A+DPV+ + + +S+ +L W QP A G Sbjct: 66 SYPEEWLSLYAEHDFAAVDPVVRAHIADFSAKPWSEAYLKWG-----RPQPFLSLAEDFG 120 Query: 115 LRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR-LNDEIV 173 +R+G + ++ N + FS C + + P+ + ++ + +L AL R + ++ Sbjct: 121 IRKGYSFGVLSSNDRTASI-FSLCVSEKYPVHTPQI---LDILAPYFHEALRRTVQTDLP 176 Query: 174 MTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 + RE E++ W A GK EI++IL ISE TV FH + +K+ A N++ Sbjct: 177 SACLATLTPREIEVISWLANGKNYWEISVILGISERTVKFHTSTIVQKLGAANRSHAVAI 236 Query: 234 AAATGLI 240 A +TGLI Sbjct: 237 AISTGLI 243 >UniRef50_C4L8Q9 Transcriptional regulator, LuxR family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L8Q9_TOLAT Length = 254 Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 68/233 (29%), Positives = 101/233 (43%), Gaps = 23/233 (9%) Query: 15 LRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAK 74 R Q +T + + +++ + ++YY LC+ + + T P+ W +Y Sbjct: 13 FRIQNCKTPQMLANQLTILCAANNFEYYQLCLTLRRGLQQTDLTLLTQTPDNWAEHYAKN 72 Query: 75 NFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWE------AARAHGLRRGVTQYLMLPNR 128 N + D + L W SEA+P E R G+ G+ L P Sbjct: 73 NTIQNDSLYQRAQTQSRPLFWQ----SEAKPEHENFLPMDCWRQFGMEEGIAVPLHGPAG 128 Query: 129 ALGFLSFSRCSAREIPI-LSDELQLK-MQLLVRESLMALMRLNDEIVMTPEM-NFSKREK 185 G+ + SR ++ PI L D L + +++E + L +PE N S REK Sbjct: 129 FCGYFALSR--HKKEPIRLQDFFHLSYLGHILQEQAIQLF--------SPEQSNLSGREK 178 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 E L W +EGKTS EIA IL I+E TVNFH N +K N+ Q TG Sbjct: 179 ECLFWVSEGKTSWEIAQILGITERTVNFHLNNAIRKSGCKNRYQTVAKNIITG 231 >UniRef50_A1TTR7 Transcriptional regulator, LuxR family n=3 Tax=Acidovorax citrulli RepID=A1TTR7_ACIAC Length = 242 Score = 82.8 bits (203), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 74/241 (30%), Positives = 105/241 (43%), Gaps = 16/241 (6%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLC---VRHPVPFT-RPKVAFYT-NYPE 65 R + R + T E+ E L Y ++SLC +R T +P + + NYP Sbjct: 4 RDFIQRANQALTQTELLACFEQAVLLLGYQHFSLCYVQLRQDGSGTSQPPIGVLSHNYPS 63 Query: 66 AWVSYYQAKNFLAIDPVLNPENFSQGHLMWND---DLFSEAQPLWEAARAHGLRRGVTQY 122 WVS+Y A+N+ DPV + W D EA + EA A G+ Sbjct: 64 RWVSHYIARNYYLEDPVRRHAPQAMSPYRWKDVSAQGDREAHIMDEATDA-----GLADG 118 Query: 123 LMLPNRALGFLSF--SRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPE-MN 179 L LP G F + S +++ + +D L+ + MR E P + Sbjct: 119 LGLPIHEPGGRIFLATVASHQQLTLGNDACVRTYALVTAFHALYTMRFATEQTQIPTAVK 178 Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 + RE E L W A GK+S EI I+ ISE+TVNFH KN K + ++ A AA GL Sbjct: 179 LTSREAECLTWVAYGKSSWEIGRIMRISEHTVNFHLKNAMAKFDTASRVTAAVRAANLGL 238 Query: 240 I 240 I Sbjct: 239 I 239 >UniRef50_B0M190 AHL-dependent transcriptional regulator n=2 Tax=Gluconacetobacter RepID=B0M190_9PROT Length = 236 Score = 82.8 bits (203), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 8/189 (4%) Query: 55 PKVAF-YTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND--DLFSEAQPLWEAAR 111 PK F + YP WV++Y N++ DP++ F W++ ++ + + Sbjct: 51 PKENFIHVGYPTEWVNFYIENNYIVSDPIIKKSRFMSHPYFWHEIKNINKAEKKIIRDVS 110 Query: 112 AHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDE 171 G+++G+T + +R + ++ C A + E++L ++ L + +L++ Sbjct: 111 EFGIKKGLTIPVHTHDRVI----YAICFAFTDKNIDREIELYLRALSNFFITGYKKLDEP 166 Query: 172 IVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVA 231 M+ + + REKE L WTA+GK+S E MI+ +SE TVNFH N K+ N+ Sbjct: 167 ADMSLPI-LTPREKECLTWTAKGKSSWETGMIVGVSERTVNFHINNALLKLKCTNRIMGV 225 Query: 232 CYAAATGLI 240 A GLI Sbjct: 226 VRAICAGLI 234 >UniRef50_B7T9X0 LuxR family transcriptional regulator n=2 Tax=Bacteria RepID=B7T9X0_9PROT Length = 246 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/215 (27%), Positives = 107/215 (49%), Gaps = 16/215 (7%) Query: 34 AQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGH- 92 A E+ + + +R P F P + YP+++ Y+ K F++ DP + + Q H Sbjct: 39 ASGFEHVLFGIELRRP--FLDPIQHITSGYPDSYQEIYRTKGFISRDPSVA---YCQTHT 93 Query: 93 --LMWNDDLF-SEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRC----SAREIPI 145 L+W +D++ +++ + E + +GL G + + + LS +R SA E + Sbjct: 94 KPLIWGEDMYLADSYEIMEESTKYGLSHGFSVPVRDGPHVVSMLSLARDKPFESAAEKKL 153 Query: 146 LSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILS 205 + D + + V + ++ + E + P++ S+RE E L+W AEGK++ I+ +L Sbjct: 154 VVDA-GMVLANCVHVASKNIIVPDVETTLRPKL--SRREHECLKWIAEGKSNGVISDLLK 210 Query: 206 ISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 ISE TV FH +N+ K+N + Q A GLI Sbjct: 211 ISEPTVEFHIRNLFTKLNVATRVQAAVVGVLMGLI 245 >UniRef50_A6CUQ5 LuxR, transcriptional regulator n=1 Tax=Vibrio shilonii AK1 RepID=A6CUQ5_9VIBR Length = 259 Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 69/228 (30%), Positives = 104/228 (45%), Gaps = 17/228 (7%) Query: 24 EEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVL 83 E++ ++ + + +++Y V PV R + TN P AW +Y+ + D V+ Sbjct: 24 EDLSGKLAEVTEVIGFEHYLFAVSVPVTVMRAENVVLTNQPLAWRQFYEDNEVMYFDQVV 83 Query: 84 NPENFSQGHLMWNDDL---FSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFS-RCS 139 S L W L + + + + A GL G+T L + LG +SFS R Sbjct: 84 LHCRNSMLPLQWRSLLANDIPDDKNVIKLASDFGLGDGITIPLRANHGCLGLISFSNRKG 143 Query: 140 AREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSK-------REKEILRWTA 192 R+I S L + LV + +ND E F + RE+ L W A Sbjct: 144 TRKIDHESTILSTYVGSLVAD------YINDIRNHVCEKQFGQVKSSLTLREQICLAWVA 197 Query: 193 EGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 EGK+S E+A I+ SE TVNFH +N +K+NA ++TQ A TG I Sbjct: 198 EGKSSWEVAQIIGCSERTVNFHIQNASEKLNAFSRTQAVSKALLTGSI 245 >UniRef50_A3JLR7 Transcriptional regulator, LuxR family protein n=4 Tax=Rhodobacterales RepID=A3JLR7_9RHOB Length = 238 Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 20/221 (9%) Query: 30 IELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFS 89 I+ + +++D+ S PV + V Y NYP+ W +Y N +DP ++ S Sbjct: 25 IDQLCEHMDFDFASYATMSPVTGS---VLGYANYPDEWKMHYMRMNLHRVDPTIHQSARS 81 Query: 90 QGHLMWNDDLFSEA-QPLWEAARAHGLR-RGVTQYLMLPNRALGFLSFSR-CSAREIPIL 146 + W E+ ++ A GL +G+T + P +G LS +R CS RE +L Sbjct: 82 IAPVDWTRLSRGESFNSVFYRANDFGLTDQGLTVPVRGPFGDVGLLSVTRSCSEREWKLL 141 Query: 147 SDELQLKMQLLVRESLMALMRLNDEIVMTPEMN-------FSKREKEILRWTAEGKTSAE 199 + + ++Q MA + L+D ++ + ++ S RE E+L+WTA GKT + Sbjct: 142 TRDKISELQ-------MAAVHLHDSVMQSDVLSRALRRPSLSARETEVLQWTAIGKTQQD 194 Query: 200 IAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 I ILSIS TV H ++ ++K+ A Q A +I Sbjct: 195 IGDILSISHRTVEVHMRSAREKLGALTTIQAVGRAIGYQII 235 >UniRef50_C5AK35 Autoinducer-binding domain protein n=2 Tax=Burkholderia RepID=C5AK35_BURGB Length = 273 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 25/224 (11%) Query: 18 QRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFL 77 +R +T E + + A++L + Y +P + P+ N+P AW A Sbjct: 49 ERGDTPESLLDAVLPIARRLGFAYLEYFFNTSLPVSAPRKLVIGNFPPAWSRREGADEVS 108 Query: 78 AIDPVLNPENFSQGHLMWNDDLFSEAQPLWEA--ARAHGLRRGVTQYLMLPNRALGFLSF 135 +P++ S + W++ F+ + P + A ARA G+ G +Q + G L+ Sbjct: 109 EANPIIARCKSSMMPMAWDEASFA-SHPDFRAMLARA-GIGGGWSQLVRDGAGNWGVLTV 166 Query: 136 SRCSAREIPILSDELQLKMQLL-----VRESLMALMRLNDEIVMTPEMNFSKR------E 184 +R + R + E++ + QLL V L ++R P M + R E Sbjct: 167 ARTACRYAGAM--EVEAEAQLLWLAHIVHSRLCQMLR--------PPMTGANRVLLTEME 216 Query: 185 KEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKT 228 K ILRWT +GKTS E+A IL +S TVNFH +N+ K+N NKT Sbjct: 217 KTILRWTVDGKTSGELAEILQVSARTVNFHVQNILAKMNTCNKT 260 >UniRef50_Q6B346 Acylhomoserine lactone dependent transcriptional activator n=1 Tax=uncultured proteobacterium QS1 RepID=Q6B346_9PROT Length = 223 Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 24/218 (11%) Query: 36 QLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMW 95 + Y YY V T+P + +NYP+ W+ Y+A+++ DPV+N W Sbjct: 17 EFNYSYY---VVRKSKNTKPIIV--SNYPDDWLMLYEARSYHLYDPVINYGMRRFAPFSW 71 Query: 96 ND----DLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQ 151 D D + L+++A + + G T +L + A F S S C + + Sbjct: 72 CDAQASDTADIGKELFQSAEKYQISSGFT--FVLHDAAELFASLSVCRSGR----GSDFG 125 Query: 152 LKMQLLVRESLMALMRLNDEIVMT---------PEMNFSKREKEILRWTAEGKTSAEIAM 202 ++ E MAL+ +D I+ T P S RE EIL+W +GK E+A+ Sbjct: 126 QRVADHSAEIQMALINFHDHILSTQTVDELFPLPANLLSAREIEILQWVGKGKAYFEVAI 185 Query: 203 ILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 I +ISE+TV FH + K+N N Q A G+I Sbjct: 186 ICAISEHTVKFHISKISTKLNVLNAKQAVYEAIRRGII 223 >UniRef50_Q9AH79 MupR n=2 Tax=Pseudomonas fluorescens RepID=Q9AH79_PSEFL Length = 234 Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 8/195 (4%) Query: 51 PFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLF--SEAQPLWE 108 PF+ + +NY +W S Y A + +DPV+ S L+W + F Q L+E Sbjct: 41 PFSSSTI--ISNYSRSWRSIYDANAYYEVDPVVFHCLNSSLPLVWTKENFINKPEQQLYE 98 Query: 109 AARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLL---VRESLMAL 165 AA A G+ G+ + P G L+F ++ + + L+ + ES + Sbjct: 99 AASASGVCSGLCMPIHGPRGEFGMLNFITDEKSPADVIRSKGLPQFALMRDYLIESFQKI 158 Query: 166 MRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAP 225 ++ V P + RE E L+W A GKTS EI+ ILS +E TVN+H N +K NA Sbjct: 159 QSAAEKEVEKPP-KLTARELECLKWVAAGKTSWEISRILSCAEVTVNYHVTNFMRKFNAE 217 Query: 226 NKTQVACYAAATGLI 240 ++ +GL+ Sbjct: 218 SRQHAVISGIRSGLV 232 >UniRef50_B1VJE7 VR protein n=2 Tax=Pseudomonas fuscovaginae RepID=B1VJE7_9PSED Length = 239 Score = 80.1 bits (196), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 22/214 (10%) Query: 27 YHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPE 86 + + L Q+L Y ++ +N+P+AW Y +N+ +IDPV++ Sbjct: 20 FQSLVLSVQKLGYSQVLYALKPNKEAQNSTARIMSNFPDAWRDLYDNENYSSIDPVVSHS 79 Query: 87 NFSQGHLMWNDDLFS--EAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIP 144 S ++W D L+ + E AR GL G+T + P +G LS S C+ P Sbjct: 80 FSSSLPILWEDKLYKTRREKEFAEDARRAGLSHGLTLPIHGPQGQVGMLSLS-CA----P 134 Query: 145 ILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF-----------SKREKEILRWTAE 193 + +E +Q+L + S+ A L D V + F + RE EIL W Sbjct: 135 MPQNEY---LQVL-QHSIAAASMLRDYAVTSGSSLFLHNSSSTAPHLTPRELEILHWAWA 190 Query: 194 GKTSAEIAMILSISENTVNFHQKNMQKKINAPNK 227 KT+ EI ILS++E TV FH KN+++K+N ++ Sbjct: 191 EKTTWEIGKILSLAEPTVEFHFKNIRRKLNVSSR 224 >UniRef50_Q2Y6B5 Transcriptional regulator, LuxR family n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6B5_NITMU Length = 244 Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 9/227 (3%) Query: 21 ETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAID 80 ++ EE++ A+ + ++++ V+ TRP + YPE W +Y + + D Sbjct: 14 DSVEELHSATTTIARAMGFEHFLYGVQVNTSLTRPYRFILSCYPEEWRKHYDKEGYANFD 73 Query: 81 PVLNPENFSQGHLMWNDDLFSEAQP--LWEAARAHGLRRGVTQYLMLPNRALGFLSFSRC 138 P ++ + ++W ++F + + A+ GL G + + LS + Sbjct: 74 PTVSHCARTSIPIIWKKEIFKGRRETRVRNEAKDCGLVSGASFSVHGGRGEAAMLSLA-- 131 Query: 139 SAREIPILSDEL---QLKMQLLVRESLMALMR--LNDEIVMTPEMNFSKREKEILRWTAE 193 ++RE +++ K QLL A+ R L+ + + N ++RE+E L W AE Sbjct: 132 TSRESREAQNDILATMAKAQLLTCYLHEAVQRIVLSKGPLPVKKANLTEREQECLLWAAE 191 Query: 194 GKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 GKT EIA I+ ISE TV FH +N +K+ N+ Q A + GLI Sbjct: 192 GKTGWEIANIVKISERTVTFHLQNAIQKLGVVNRQQAISRALSMGLI 238 >UniRef50_B9K1Q2 DNA-binding HTH domain-containing protein n=1 Tax=Agrobacterium vitis S4 RepID=B9K1Q2_AGRVS Length = 307 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 66/245 (26%), Positives = 111/245 (45%), Gaps = 25/245 (10%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYT----NYPEAWVS 69 ++R +A E+ +E + L Y Y+S + +T NYPE WV Sbjct: 49 IMRLNAAVSAAEMKAVMESSIKSLGYKYFSYHILQTPVLNATNETRHTFGINNYPEEWVE 108 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWNDDLFS-----EAQPLWEAARAHGLRRGVTQYLM 124 Y ++ ++ DP++ + W+D + S E + + E A G+ G+T LM Sbjct: 109 RYASERYVYCDPIVGISLSRKTPFRWSDAIDSDKLTEEERCVIEDAAKRGIVNGLTVPLM 168 Query: 125 LPNRALGFLSF--------SRCSAREIPILSDELQ-LKMQLLVRESLMALMRLNDEIVMT 175 + L ++ S A I I+S + +++ E L+ R + Sbjct: 169 SRHGELAIMTVIPDEKFQDSLPEAHLIHIISQFFHSCALPVVMEEHLIGSYRRRRSFL-- 226 Query: 176 PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 S REKE + W ++GK+S EIA IL ISE +V F+ +++++K+ A N+TQ A Sbjct: 227 -----SAREKETVIWVSKGKSSWEIAKILGISEKSVEFYMESVKRKLEAVNRTQAVVKAI 281 Query: 236 ATGLI 240 GLI Sbjct: 282 MLGLI 286 >UniRef50_B1KKQ1 Transcriptional regulator, LuxR family n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KKQ1_SHEWM Length = 250 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/182 (34%), Positives = 84/182 (46%), Gaps = 19/182 (10%) Query: 67 WVSYYQAKNFLAIDPVLNPENFSQGHLMWND----DLFSEAQ-PLWEAARAHGLRRGVTQ 121 W + YQ K F IDPV++ + W SE Q E A+ GL+ G + Sbjct: 80 WDNIYQKKKFQYIDPVVSCSASFRRSFNWASVPSMITLSEVQFNFLERAQEMGLKEGASI 139 Query: 122 YLMLPN---RALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEM 178 + L S CS L+ E ++L+ S A+ RL + P Sbjct: 140 GSFSTRQIYKELTITSVCGCS------LNPEQLASLELINAVSAQAMKRL-----ILPAE 188 Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 + RE EIL W++EGK+S EI MI SI+E TV FH KN+ KK+N N+ Q A G Sbjct: 189 KLTGRESEILAWSSEGKSSWEIGMICSITERTVKFHLKNIYKKLNVQNRAQAIVCAIRLG 248 Query: 239 LI 240 LI Sbjct: 249 LI 250 >UniRef50_A4JQY4 Response regulator receiver protein n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JQY4_BURVG Length = 260 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 27/202 (13%) Query: 53 TRPKV---AFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND--DLF-SEAQPL 106 +RP + A T+YP WV +Y N+ A+DPV S G W D DL +E L Sbjct: 71 SRPSISMEAICTHYPNNWVQHYLQHNYGAVDPVHRAAFTSSGPYRWADITDLSQNERHVL 130 Query: 107 WEAARAHGLRRGVTQYLMLPNRALG----FLSFSRCSAREIPILSDELQLKMQLLVRESL 162 EA A GL+ G L +P R +G ++ S S+R + + + + Sbjct: 131 AEACDA-GLKNG----LSIPIREIGGSILLINLSGPSSR--------INTGTKRQLASVI 177 Query: 163 MALMRLNDEIVMTPEMN----FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNM 218 L RL + + P N S R+++ L W A+GKTS++I MIL IS +TV +H Sbjct: 178 SNLFRLELDRLAPPHPNEFIQLSPRQRQCLSWVAQGKTSSDICMILKISRHTVEYHITEA 237 Query: 219 QKKINAPNKTQVACYAAATGLI 240 + +N ++ A A+ GL+ Sbjct: 238 MRVLNVNSRIAAAVIASNYGLL 259 >UniRef50_C6B0L0 Transcriptional regulator, LuxR family n=10 Tax=Rhizobium RepID=C6B0L0_RHILS Length = 234 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/101 (41%), Positives = 66/101 (65%), Gaps = 5/101 (4%) Query: 145 ILSDELQLKMQLLVRESLMALMRLNDEI---VMTPEMN--FSKREKEILRWTAEGKTSAE 199 +LS E Q Q + + L+ MR+ D++ ++TPEM+ ++RE EI++WT+EGKTSAE Sbjct: 133 VLSGERQEPDQSEIADILLDAMRIFDKLYEEILTPEMSGRLTQRESEIVKWTSEGKTSAE 192 Query: 200 IAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 IA+IL +SE+TVN H +K++A N+ + A GL+ Sbjct: 193 IAIILGLSEHTVNSHITAAARKLDAVNRVHMVAIALRNGLV 233 >UniRef50_P74946 Transcriptional activator protein vanR n=3 Tax=Vibrionaceae RepID=VANR_VIBAN Length = 240 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 6/183 (3%) Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDD--LFSEAQPLWEAARAHGLRRGV 119 NYP +W Y F+ IDP++ + + W+D + ++ + ++E AR +GL+ G Sbjct: 56 NYPNSWRQQYDESGFMHIDPIVKYSITNFLPIRWDDAKRVNNDGRVIFEEARCNGLKAGF 115 Query: 120 TQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQL--LVRESLMALMRLNDEIVMTPE 177 + + G +SF+ + + + + L+ ++ + R + + P Sbjct: 116 SIPIHGLRGEFGMISFATSDTKSYDLNQQSIHTSQLIVPLLAHNIGNITRYHKD--AKPR 173 Query: 178 MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAAT 237 + RE + L W AEGK++ EIA I++ SE TV FH N KK+ A N+ Q A Sbjct: 174 AVLTAREVQCLAWAAEGKSAWEIATIINTSERTVKFHFSNACKKLGATNRYQAITKAILG 233 Query: 238 GLI 240 G I Sbjct: 234 GYI 236 >UniRef50_Q3K6H8 LuxR family regulatory protein n=1 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3K6H8_PSEPF Length = 235 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 65/235 (27%), Positives = 107/235 (45%), Gaps = 6/235 (2%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHP-VPFTRPKVAFYTNYPEAW 67 W+ + + R + E + + A + + + + V P P +P N+ +AW Sbjct: 4 WKEYQIKQLTRAKEIESAFPILRTFANNIGFQFCGIQVSRPESPSFKP--FHINNFTKAW 61 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQ-YLMLP 126 Y+ DP+ + + S +WN FS+A +W A R HG+ G +Q YL Sbjct: 62 NEEYENNY-SEEDPITSYCHQSMLPFLWNRKAFSKAPQMWNALRNHGMEHGWSQSYLNEE 120 Query: 127 NRALGFLSFSRCSAREIPI-LSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREK 185 N +S +R + + L D+ + + S + + L P + S RE Sbjct: 121 NDLCCTISLARPQSEIFALELYDQYGVMHFITQHLSELFVHALPPVPAKPPPVRLSTREL 180 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 EI+R A GKT+ EI IL+++E TVN+H KN+ K+NA NK A+ G + Sbjct: 181 EIVRLCAYGKTAWEIGQILNVAERTVNYHIKNLIVKLNACNKMSAIVKASKLGFL 235 >UniRef50_C5V7F6 Transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V7F6_9PROT Length = 243 Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 94/187 (50%), Gaps = 9/187 (4%) Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFS--EAQPLWEAARAHGLRRG 118 +NY W++ Y A+ +DP + L+W+ +FS + + ++E A +G++ G Sbjct: 56 SNYSADWLNKYTAEKLHHVDPTFSHCISKSTPLIWSPKIFSAQKQKEMYEEACGYGVKSG 115 Query: 119 VTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQL-----LVRESLMALMRLNDEIV 173 VT + LG + F + + D +L + ES + M+ + + V Sbjct: 116 VTLPIHGAKGELGIVCFVSDTKPDKRFHRDANHHLPELACFRDFILESSLQFMKPSRQ-V 174 Query: 174 MTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 P ++ + RE E L+W+A GK+S EI IL+ +E TVNFH N+++K + ++ Q Sbjct: 175 ENP-ISVTHRELECLKWSASGKSSWEIGHILNCTEATVNFHFSNIRRKFSTTSRQQAIVK 233 Query: 234 AAATGLI 240 A + GLI Sbjct: 234 AISLGLI 240 >UniRef50_Q9ANB1 ID375 n=2 Tax=Bradyrhizobium japonicum RepID=Q9ANB1_BRAJA Length = 261 Score = 76.3 bits (186), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 24/193 (12%) Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFS--EAQP----LWEAARAHGL 115 N+P W Y + + AIDPV+ +W D+L S E QP + A+ GL Sbjct: 79 NFPSDWCQRYAEQEYQAIDPVVRRTAMLPRPFLW-DELTSRYELQPRELRVLREAKEAGL 137 Query: 116 RRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT 175 + G++ L F+SF+ P + Q +M L + +A N +T Sbjct: 138 KHGMSVPLFGSQGRSAFVSFAS------PFDDADPQDRMAHL---TTLASAFHNAVAQIT 188 Query: 176 PEMN--------FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNK 227 P ++ + RE E L W AEGK++ I ++++++NTVNFH KN+ +K+ A N+ Sbjct: 189 PPLDESCETDIPLTPRETECLYWVAEGKSAWVIGQLVNVTDNTVNFHMKNVIRKLGAANR 248 Query: 228 TQVACYAAATGLI 240 T A G+I Sbjct: 249 TNAVAKATRRGII 261 >UniRef50_D0LSA4 Transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LSA4_HALO1 Length = 254 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/191 (31%), Positives = 88/191 (46%), Gaps = 18/191 (9%) Query: 63 YPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQP-----LWEAARAHGLRR 117 YP AW Y K++ DPVL S + W AQP + A H L Sbjct: 67 YPNAWADRYYEKHYWYSDPVLAHCGRSPTPIDWTTVQNQPAQPASAEQVMREAHEHDLCS 126 Query: 118 GVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEI----- 172 GVT + + LG LS + R++ S EL+ +++ + + L L +++ Sbjct: 127 GVTVTVRDVSGRLGILSLA---TRDV--YSAELRDRIRHAIPIAQFVLSHLVEKLEAHFH 181 Query: 173 VMTPEM---NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQ 229 V ++ S+RE+E LRW A GKTS EI IL I+E T FH N KK+ A N++ Sbjct: 182 VRLEDLQRYKLSERERECLRWVAAGKTSWEIGHILGIAERTAIFHLNNAMKKLGAVNRSH 241 Query: 230 VACYAAATGLI 240 A G+I Sbjct: 242 AVARALQHGVI 252 >UniRef50_P25084 Transcriptional activator protein lasR n=10 Tax=Pseudomonas RepID=LASR_PSEAE Length = 239 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 10/186 (5%) Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFS--EAQPLWEAARAHGLRRGV 119 NYP AW +Y + +DP ++ S + W ++ + +E A A GL G+ Sbjct: 55 NYPAAWREHYDRAGYARVDPTVSHCTQSVLPIFWEPSIYQTRKQHEFFEEASAAGLVYGL 114 Query: 120 TQYLMLPNRALGFLSFS-----RCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVM 174 T L LG LS S R A + + + +L +L + L E + Sbjct: 115 TMPLHGARGELGALSLSVEAENRAEANR---FMESVLPTLWMLKDYALQSGAGLAFEHPV 171 Query: 175 TPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 + + + REKE+L+W A GKTS EI++I + SE VNFH N+++K ++ A A Sbjct: 172 SKPVVLTSREKEVLQWCAIGKTSWEISVICNCSEANVNFHMGNIRRKFGVTSRRVAAIMA 231 Query: 235 AATGLI 240 GLI Sbjct: 232 VNLGLI 237 >UniRef50_Q4ZW02 Regulatory protein, LuxR:Autoinducer-binding n=9 Tax=Pseudomonas syringae group RepID=Q4ZW02_PSEU2 Length = 247 Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 64/238 (26%), Positives = 99/238 (41%), Gaps = 31/238 (13%) Query: 18 QRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRP-KVAFYTNYPEAWVSYYQAKNF 76 Q +E E H I Y Y+S P TR K +NYP++W+ Y A N+ Sbjct: 26 QLIEDFENDLHRI----GDFTYAYFS------SPKTRTVKPVILSNYPDSWLKSYIASNY 75 Query: 77 LAIDPVLNPENFSQGHLMWNDDLFS----EAQPLWEAARAHGLRRGVTQYLMLPNRALGF 132 IDP++ S W + + E + + + L G T L + + F Sbjct: 76 HLIDPIIKHAWHSITPFFWREARHAIQGVETDDFLKRSAKYQLSSGAT--FTLHDASGLF 133 Query: 133 LSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT----------PEMNFSK 182 + S C+AR+ + +++ + M+L+R +D + T S Sbjct: 134 AALSLCNARQ----QTDFDQRIRDKAADIQMSLIRFHDRLTKTQAPHELFPQPTRCKLSS 189 Query: 183 REKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 RE +L+W A GK +EIA I SISE TV FH N+ K+ Q A G++ Sbjct: 190 REIGVLKWVAMGKAYSEIAEIFSISERTVKFHMSNVSSKLEVRTAKQAVYKAINMGMV 247 >UniRef50_B9LZZ1 Transcriptional regulator, LuxR family n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZZ1_GEOSF Length = 248 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 18/187 (9%) Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWE---AARAHGLRRG 118 +YPE W+ Y+ KNF +DP+ ENFS L + +D + + P E AAR L G Sbjct: 69 SYPEEWLITYKRKNFCQVDPIA-KENFSNFELQFWEDTYKKWNPPKEFISAARDFNLYNG 127 Query: 119 VTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPE- 177 + A G + + + + E+L + ++ Sbjct: 128 I---------ACGVRNLKSTEGSLFSVAGKLENHPREKFIIENLTPHLHTAFTTYLSKTK 178 Query: 178 --MNF--SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 +NF SKRE E+L W +GK+S +I++IL+IS TV FH +N+ K+NA ++T Sbjct: 179 APVNFELSKREIEVLNWVKKGKSSWDISVILAISVRTVKFHVENIMVKLNAVSRTHAVAI 238 Query: 234 AAATGLI 240 A + G+I Sbjct: 239 ALSAGVI 245 >UniRef50_Q9L6U7 Acylhomoserine lactone dependent transcriptional activator n=2 Tax=Pseudomonas RepID=Q9L6U7_PSEFL Length = 242 Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 57/193 (29%), Positives = 87/193 (45%), Gaps = 18/193 (9%) Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120 +NYP W+ Y+ N+ IDP+++ S W+D L +A P R+ L R + Sbjct: 55 SNYPARWLKAYKNANYHLIDPIIHHGLKSCAPFSWSDAL--QAAP---CERSRELFRRSS 109 Query: 121 QY-------LMLPNRALGFLSFSRCSAR-----EIPILSDELQLKMQLLVRESLMALMRL 168 QY L + F S S C++ E + + L+M L+ + +R Sbjct: 110 QYRICTGATFTLHDAGGMFSSLSLCNSGPQAEFERRMADQQGHLQMALIRFHGRLLSLRA 169 Query: 169 NDEIVMTPEMN-FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNK 227 DE+ P+ S RE +L+W GK EIA+I +ISE TV FH N+ K+ N Sbjct: 170 MDELFPEPQTGPLSARELGVLKWVMMGKAYREIAVICAISERTVKFHMSNISGKLQVCNA 229 Query: 228 TQVACYAAATGLI 240 Q A G++ Sbjct: 230 KQAVYEAQRQGIL 242 >UniRef50_C6B001 Transcriptional regulator, LuxR family n=13 Tax=Rhizobiaceae RepID=C6B001_RHILS Length = 251 Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 64/249 (25%), Positives = 107/249 (42%), Gaps = 28/249 (11%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSL--------CVRHPVPFTRPKVAFYTNYP 64 +L+ + E V E+E + ++YY L ++P P+ A +P Sbjct: 9 LLVILEECSNPEAVITELEQILRGCGFEYYGLPHHLPQSPLQQNPEPWA---AALAGRWP 65 Query: 65 EAWVSYYQAKNFLAIDPVLNPENFSQGHLMW--------NDDLFSEAQPLWEAARAHGLR 116 E W Y AK + IDP++ +Q W D + + A HGL Sbjct: 66 EQWPQIYAAKKYALIDPMVRYLAHAQRPFRWREAMAAFRKDAYHRRMEQMMVDAFGHGLE 125 Query: 117 RGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDE----- 171 G Y+ + G L + + I + E+ L ++ + R++ L+ L E Sbjct: 126 DG---YIFPIHGRSGILGSLSLAGKPIELSPVEIAL-LEAVARKAFWRLLDLKGEAQALE 181 Query: 172 IVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVA 231 V+ + ++RE EIL + AEG TS EI+ +L IS +TV+++ +Q K+ A N+ Sbjct: 182 TVLPADTPLTRREMEILHYLAEGMTSMEISKMLKISNHTVDWYMNGLQDKLKAKNRQHAV 241 Query: 232 CYAAATGLI 240 A GLI Sbjct: 242 ALAFRHGLI 250 >UniRef50_Q1GQ40 Transcriptional regulator, LuxR family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GQ40_SPHAL Length = 276 Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 19/234 (8%) Query: 17 FQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTR-----PKVAFYTNYPEAWVSYY 71 F + E+++ + A ++ +D+++L F R P NYP+AW Y Sbjct: 40 FTGADREEQLFAALTKAAGRMGFDHFALA------FDRRGTGEPASILVHNYPDAWAKVY 93 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYLMLP 126 + DP+ S W L + L AR G+ G T LP Sbjct: 94 VGFDLSGTDPIRRASERSLTGFEWRHVDRYIPLSRGDRQLLSVARDSGVGDGFTVPRHLP 153 Query: 127 NRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKE 186 A G SF+ +IP +D L ++L ++ + L + P ++R++E Sbjct: 154 GEASGTCSFAVRPHADIP--ADMLH-AAEILGAIAIASARELIGSSPLRPRPILTERQRE 210 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + W+A GKT+ EIA IL ISE TV H K +++ + ++ + A GLI Sbjct: 211 CVLWSARGKTAGEIADILGISEETVVRHLKMARERYSVHCRSMLILCALFDGLI 264 >UniRef50_A4WT88 Autoinducer-binding domain protein n=8 Tax=Rhodobacterales RepID=A4WT88_RHOS5 Length = 233 Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 58/217 (26%), Positives = 102/217 (47%), Gaps = 24/217 (11%) Query: 36 QLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMW 95 +L +D+ S P+ V Y NYP++W +Y +N +DP ++ S + W Sbjct: 26 RLGFDFASYATTSPMTGA---VQGYANYPDSWKMHYMRRNLHRVDPTIHKSALSIAPVDW 82 Query: 96 ----NDDLFSEAQPLWEAARAHGLR-RGVTQYLMLPNRALGFLSFSRCSAREIPILSDEL 150 D+ F + ++ AA G+ +G+T + P G LS +R R SD Sbjct: 83 ARFERDERF---RAVFFAAEDFGITPQGLTVPVRGPYGDRGLLSVTRRCPR-----SDWD 134 Query: 151 QLKMQLLVRESLMALMRLNDEIVMTPEMN-------FSKREKEILRWTAEGKTSAEIAMI 203 +LK + + + +A + L+D ++ + ++ S RE E+L+W A GK+ +I I Sbjct: 135 KLK-RAAIGDLQVAAVHLHDAVMRSDVISRALRQPRLSTREIEVLQWVAAGKSQMDIGDI 193 Query: 204 LSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L IS TV H ++ ++K+ + Q A GL+ Sbjct: 194 LGISHRTVEVHLRSAREKLGTLSTVQAVGRAIGLGLV 230 >UniRef50_B2VEE0 Transcriptional activator protein n=1 Tax=Erwinia tasmaniensis RepID=B2VEE0_ERWT9 Length = 240 Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 84/180 (46%), Gaps = 15/180 (8%) Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEA----QPLWEAARAHGLR 116 TNYP WV Y+ K DPV+ W+++L + + L++ AR G+ Sbjct: 44 TNYPGEWVKQYREKGLQYTDPVVITSLNRLTPFAWDENLLAGSGFRFSKLFDRAREFGVT 103 Query: 117 RGVTQYLMLPNRALGFLSFS-----RCSAREIPILSDELQLKMQLL-VRESLMALMRLND 170 G T L N L LSF+ R A E + ++ ++ + L V E+ + L L++ Sbjct: 104 NGYTFVLHDYNNNLVTLSFTFTPECRAEATE-TFIKNKGEISLLLASVHETYLTLTSLSE 162 Query: 171 EIVMTPEMN----FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPN 226 + F++RE EIL W + GKT E AMIL I TV FH N+ KK+ N Sbjct: 163 KNASRSRSENASRFTERENEILYWASVGKTYPETAMILGIKTCTVKFHMSNIVKKLGVAN 222 >UniRef50_B3Q959 Transcriptional regulator, LuxR family n=7 Tax=Bradyrhizobiaceae RepID=B3Q959_RHOPT Length = 243 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 61/193 (31%), Positives = 88/193 (45%), Gaps = 15/193 (7%) Query: 55 PKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEA 109 P++ +P W Y ++NF A+DPV + +W+D D A + Sbjct: 57 PELTLANGWPRDWFDLYVSENFSAVDPVPRHGATTVYPFVWSDAPYDRDRDPAAHRVMTR 116 Query: 110 ARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLN 169 A GL G L + G + S A + P LS + MQL+ S+ A RL Sbjct: 117 AAEFGLVEGYCIPLHYDD---GSAAIS--MAGKDPDLSPAARGAMQLV---SIYAHSRLR 168 Query: 170 DEIVMTP--EMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNK 227 P + RE EIL+W A+GKT+ EI++IL I+E TV FH +K++A N+ Sbjct: 169 ALSRPKPIRRNRLTPRECEILQWAAQGKTAWEISVILCITERTVKFHLIEAARKLDAANR 228 Query: 228 TQVACYAAATGLI 240 T A GLI Sbjct: 229 TAAVAKALTLGLI 241 >UniRef50_B1M9X4 Transcriptional regulator, LuxR family n=2 Tax=Methylobacterium RepID=B1M9X4_METRJ Length = 248 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 14/232 (6%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRP-KVAFYTNYPEAWVSYY 71 ++ R +R T +VY E+ YD + + P + + +P W Y Sbjct: 14 IVHRLRRASTDVDVYSELRRSGAIFGYDVFLIAGLPRAPHENLYDCSLISGWPPEWGRRY 73 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQP----LWEAARAHGLRRGVTQYLMLPN 127 Q + + +DPV+ + +W + + ++ P + E ARA L G + Sbjct: 74 QERRHMHVDPVIRHIRGTTDPFLWQEAVDAQVTPEGMVVMEEARAFSLNEGFCVPFHQID 133 Query: 128 RALGFLSFSRCSAREIPILSDELQLKMQLLVRESL-----MALMRLNDEIVMTPEMNFSK 182 +SF R LS + + + L+ ++ +A R E TP + Sbjct: 134 GTEAGVSFGGEQVR----LSQDERAALHLVAIYAMSTAKAIARRRGLSEDDGTPPSPLTG 189 Query: 183 REKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 RE E L+W++ GK++ EI +ILSIS TV H + +K+N+ +TQ A Sbjct: 190 REAECLKWSSTGKSAWEIGVILSISTRTVEHHLGSAVRKLNSVTRTQAVAEA 241 >UniRef50_Q7NQP7 Transcriptional activator, LuxR/UhpA family of regulators n=2 Tax=Chromobacterium violaceum RepID=Q7NQP7_CHRVO Length = 265 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 11/175 (6%) Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEA-----ARAHGL 115 +YP W++ Y +NF DP++ + QG ++W ++ FS A+ E A ++G+ Sbjct: 78 VSYPSDWLNQYSQENFAQHDPIMR-IHLGQGPVIW-EERFSRAKGSEEKRFIAEASSNGM 135 Query: 116 RRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT 175 G+T +G S +E P + L + L A +R+ + + Sbjct: 136 GSGITFSAASDRNNVG--SILSIGGKE-PGRNAALVAMLNCLTPHLHQAAVRIANLPPAS 192 Query: 176 PE-MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQ 229 P M S+RE +I W + GKT+ EIA IL+ISE TV FH N+ +K+NA N+T Sbjct: 193 PSNMPLSQREYDIFHWMSRGKTNWEIATILNISERTVKFHVANVIRKLNANNRTH 247 >UniRef50_Q15YZ8 Transcriptional regulator, LuxR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15YZ8_PSEA6 Length = 248 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 15/218 (6%) Query: 34 AQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHL 93 Q ++ +Y L V P + +NYPE W+ +Y ++ DPV+ Q + Sbjct: 31 CQLIDIPFYLLGVIGQTSSYSPTIRVISNYPEKWLEFYFKESEQQNDPVVKYIFEKQSPI 90 Query: 94 MWNDDL----FSEAQPL--WEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILS 147 W+ + FS + L +E A A+GL G++ + + + S + + + Sbjct: 91 RWDKLVEYQDFSSTKGLLVFEKAAAYGLYNGLSIPIRSTSENIAVFSVAIDERSDANRVL 150 Query: 148 DELQL-----KMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAM 202 D Q+ L R L+ + +DE T +KRE E L W EGKT+ EI+ Sbjct: 151 DNAQMFCHTFATHLFERYVLLEI-SASDE---TDRRELTKRELECLFWACEGKTAWEISQ 206 Query: 203 ILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 I+++SE TV FH N K+ A N+ A G+I Sbjct: 207 IINVSERTVLFHLGNSNTKLGAINRQHAVALAIKKGII 244 >UniRef50_D2LFU9 Transcriptional regulator, LuxR family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LFU9_RHOVA Length = 251 Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 64/214 (29%), Positives = 89/214 (41%), Gaps = 23/214 (10%) Query: 42 YSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFS 101 YSL HP NYP+ W+ +Y+ + DPV + W + Sbjct: 40 YSLITDHPSLGLNAGHGLVCNYPDDWMEHYRLNQYEKKDPVPQYGISASRPFTWASVV-- 97 Query: 102 EAQPLW---------EAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQL 152 AQ W EA A L G+ + N L + P L Sbjct: 98 -AQRKWHPDQMKVMHEAEEAR-LCDGIAVPVCGVNGELAGFGIASSHGGVSP--DRTLLH 153 Query: 153 KMQLLVRESLMALMRLNDEIVMTP------EMNFSKREKEILRWTAEGKTSAEIAMILSI 206 K+Q L + +A L E + TP E+ ++REKEI+ W AEGK+ + IA IL + Sbjct: 154 KVQALAIQFHLAFTEL--EKIETPLTENLAEVYLTEREKEIMSWAAEGKSDSVIAEILGV 211 Query: 207 SENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 S +TV FH N+ KK+NA +T A GLI Sbjct: 212 SHSTVRFHMNNVFKKLNANERTLATVKAIRHGLI 245 >UniRef50_B1K7Y6 Transcriptional regulator, LuxR family n=3 Tax=Burkholderia cepacia complex RepID=B1K7Y6_BURCC Length = 321 Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 7/181 (3%) Query: 63 YPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND--DLFSEAQPLWEAARAHGLRRGVT 120 YP+ WV++Y +++ +DPV W D L Q + AR GL GV+ Sbjct: 143 YPDHWVAHYAQRDYGPVDPVHRMAFARATPYRWADIRGLNRIEQRVLGEARDAGLTSGVS 202 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESL-MALMRLNDEIVMTPEMN 179 L N + ++ + S P + E+ +++ L+ L RL P + Sbjct: 203 IPLREANGDILLVNLASPS----PEIKTEVHMRLASLIGALFHQELHRLMKPHRPEPALE 258 Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 S R++E L W A GK+S IA I+ IS +TV++H K + ++T A +A TGL Sbjct: 259 LSPRQQECLAWVARGKSSWAIAAIVGISPHTVDYHIAEAMKILGINSRTAAAVHAVTTGL 318 Query: 240 I 240 I Sbjct: 319 I 319 >UniRef50_Q7MYV6 Similar to transcription regulator n=2 Tax=Photorhabdus RepID=Q7MYV6_PHOLL Length = 238 Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 58/196 (29%), Positives = 90/196 (45%), Gaps = 10/196 (5%) Query: 37 LEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWN 96 L +++YS+ PFT K TN S Y N D ++N + + N Sbjct: 32 LGFEFYSIYQEEKYPFTTKKYVLITNLNIETASNYNQDNNHDSDQLMNGDYTFSIPSVCN 91 Query: 97 DDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRAL-GFLSFSRCSAREIPILSDELQLK-- 153 D + E + ++ + V L + + G S + +E I +E+ K Sbjct: 92 DKISKNTDFTIEKSNSN--KNEVKNSLSIKIKGYHGERSIFSVARKEGTISHNEILNKAG 149 Query: 154 -MQLLVRESLMALMRLND--EIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENT 210 + +L E + L + + ++ P + S RE E++RWT EGKTSAEIA IL IS T Sbjct: 150 VLGILANECIKTFNNLKNKKDKIIIPTL--STREVEVIRWTCEGKTSAEIADILDISTRT 207 Query: 211 VNFHQKNMQKKINAPN 226 VNFH N+ +K+ PN Sbjct: 208 VNFHINNVMEKLVVPN 223 >UniRef50_Q4KAK4 Transcriptional regulator, LuxR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KAK4_PSEF5 Length = 240 Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 115/242 (47%), Gaps = 18/242 (7%) Query: 10 RRTMLLRFQRM----ETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPE 65 RR+ + F+R+ + +E+ E+E + E+ S +R + V +Y Sbjct: 6 RRSPEIEFKRVNIPSKLCDEIRTELERETNHTEF---SFILRSDLKSHSKVVYNIDSYSY 62 Query: 66 AWVSYYQAKNFLAIDPVL---NPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQY 122 AW Y+A+ F +DP+L +P + +W+DD F E++ +A + +G G++ Sbjct: 63 AWRRDYEAEKFWIVDPILKIHSPTPYFP--TIWSDD-FIESKLFLQAGKDYGFLSGMSIG 119 Query: 123 LMLPNRALGFLSFSRCSAREI----PILSDELQLKMQLLVRESLMALMRLNDEIVMTPEM 178 L G LS + + P+ LK+ + + + L I + Sbjct: 120 LPCSFGNYGVLSIASLKQGSLQGVDPLDWSACVLKVYAKLIDYINRQHSLQ-RIFNDHQQ 178 Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 + RE +ILR+TA+G +S +IAM + +S++++++H + +K+++PNK Q A G Sbjct: 179 ALNDREIDILRYTADGMSSTDIAMRMHLSKSSIDYHIAKILQKLDSPNKHQALALAIKKG 238 Query: 239 LI 240 I Sbjct: 239 KI 240 >UniRef50_Q28T92 Transcriptional regulator, LuxR family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28T92_JANSC Length = 243 Score = 70.1 bits (170), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 19/189 (10%) Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND--DLF---SEAQPLWEAARAHGLR 116 +PE W+ Y + IDP+ W++ DL ++ + RA GL Sbjct: 54 GFPEEWICEYLNRKLALIDPIPALAARMSRPFYWHEIQDLIPPSAQTDAYLDRLRASGLG 113 Query: 117 RGVTQYLMLPN-----RALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDE 171 G+ Y+ P LGF R + L E ++Q + + + + L+D+ Sbjct: 114 DGLAFYVFGPGLRNAYVGLGF-------GRPVVDLPPEQIFRLQCVAQAGHLRVCELSDQ 166 Query: 172 IVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVA 231 E S REK++L W A+GK+++ IA IL++S +TV+ H +++ +K++ ++T A Sbjct: 167 --APKEAALSPREKQVLDWIAKGKSNSVIAEILAMSPHTVDAHVRSIYRKLDVTDRTSAA 224 Query: 232 CYAAATGLI 240 +G++ Sbjct: 225 LRGVGSGVL 233 >UniRef50_B8I9S3 Transcriptional regulator, LuxR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8I9S3_METNO Length = 246 Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 65/231 (28%), Positives = 103/231 (44%), Gaps = 18/231 (7%) Query: 17 FQRMETAEEVYHEIELQAQQLEY----DYYSLCV-RHPVPFTR--PKVAFYTNYPEAWVS 69 F ++ +EV E Q + E+ + S + R P P R P + F +P+ W++ Sbjct: 13 FALIDALDEVRDPFEAQTRIFEHIQHVGFTSFTITRLPRPSDRLGPNMLF-NMWPKDWLT 71 Query: 70 YYQAKNFLAIDPVL-----NPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLM 124 +Y DPV+ E F+ + ++ D A+ + + A A GL G + + Sbjct: 72 HYDRVGHYRFDPVVRQCYRTTEPFAWSEVPFDADQPDRARRVMDEAAAFGLGFG---FCI 128 Query: 125 LPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLN-DEIVMTPEMNFSKR 183 + ALGF + I LS +++ + +L + A R D P S R Sbjct: 129 PVHDALGFQGGVSLAGERID-LSPKIRRGLHMLGLYAWGAATRTTEDRRRSEPGRLLSAR 187 Query: 184 EKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 E+++L W A G+T EIA IL +S TV H K+ + KI A N TQ A Sbjct: 188 ERDVLSWAAMGRTREEIATILGVSHETVATHLKSARIKIGARNTTQTVVEA 238 >UniRef50_Q98A91 Transcriptional regulator n=4 Tax=Mesorhizobium RepID=Q98A91_RHILO Length = 241 Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 12/193 (6%) Query: 53 TRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLF-----SEAQPLW 107 T+P++ +NY W S+Y + IDPV+ S+ W L + Q L+ Sbjct: 48 TKPRL--ISNYHSGWTSHYLRHQYERIDPVIEWARCSECPFQWGPGLGHAGISTRQQQLF 105 Query: 108 EAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPI---LSDELQLKMQLLVRESLMA 164 + A G+ G+T + L +R G + + + R P ++++ + ++++ + Sbjct: 106 DEAAEFGICCGLT--IPLVDRRGGVAAMTFAADRLDPTFLRVAEQYEQALEIMAMCFHIG 163 Query: 165 LMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINA 224 + R + ++ + RE E L WTA+GK++ EI IL I E T FH N +KK+ Sbjct: 164 VRRKLARGLAVDGVSLTPREYECLEWTAKGKSAWEIGCILGIKERTAAFHLDNAKKKLGV 223 Query: 225 PNKTQVACYAAAT 237 K Q A++ Sbjct: 224 RTKNQAVTLLASS 236 >UniRef50_Q1GPX8 Transcriptional regulator, LuxR family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GPX8_SPHAL Length = 250 Score = 69.7 bits (169), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 8/222 (3%) Query: 24 EEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVL 83 + ++ + + + +D ++L + +YP +W Y N A DPV Sbjct: 20 DHLHEALTRATRDMGFDRFALSLEIGCGADSSTSLLIHDYPASWADVYIGFNLAASDPVR 79 Query: 84 NPENFSQGHLMWND--DLFSEAQ---PLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRC 138 S W + DL + +E R HGL G T LP G SF Sbjct: 80 RAAERSVLGFGWRNILDLVPMTEIEKTTFETGRRHGLADGFTVPRHLPGDVTGSCSFVTG 139 Query: 139 SAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSA 198 + IP + + ++L ++ + +L+ + + + R+++ + W A GKT Sbjct: 140 LGKSIP---HAMLIVAEMLGAMAIASARQLSGWTSRSVQPRLTDRQRDCVLWAARGKTDW 196 Query: 199 EIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 EI+ IL IS TV H K+ +++ + + YA GLI Sbjct: 197 EISRILDISHETVIQHLKDARERYETHKRASLILYALYDGLI 238 >UniRef50_Q2T747 Transcriptional regulator, LuxR family n=26 Tax=pseudomallei group RepID=Q2T747_BURTA Length = 230 Score = 69.7 bits (169), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 57/182 (31%), Positives = 82/182 (45%), Gaps = 7/182 (3%) Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFS---EAQPLWEAARAHGLRRG 118 +YP WV +Y ++ IDPV WND S E L EA A GL G Sbjct: 51 HYPSEWVEHYTRNDYFTIDPVHRAAFRYSTPFPWNDIATSNLRERHLLMEAEDA-GLDNG 109 Query: 119 VTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEM 178 ++ L P LG + S +D LL + + L + + P + Sbjct: 110 ISIPLHQP---LGRVLLVSLSGTAPTHDADAKWRNAYLLGMQFNLQLQSMRTCRPIPPSV 166 Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 + + RE+ L W A GK+S IA +L IS+ TV+FH +N +K+N ++T A A G Sbjct: 167 HLTDREQMCLTWVARGKSSWVIANMLDISKYTVDFHIENAMEKLNTRSRTFAAVKATRQG 226 Query: 239 LI 240 LI Sbjct: 227 LI 228 >UniRef50_A9DRS2 Transcriptional regulator, LuxR family protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DRS2_9RHOB Length = 239 Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 59/220 (26%), Positives = 97/220 (44%), Gaps = 24/220 (10%) Query: 34 AQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHL 93 AQ + + S H P +T Y AW++ YQ +N+ IDPV++ + Sbjct: 29 AQDMGLNNLSYLGFHKDPCGGSDPVIHTTYDPAWLARYQEENYHLIDPVVDSALEGTLPV 88 Query: 94 MWND---------DLFSEAQPLWEAARAHGLRRGVTQYLMLPNRAL----GFLSFSRCSA 140 W++ D F EA R +G+ + ++ +A+ L Sbjct: 89 DWSELPKVDRVTRDFFGEAMEF--GVRQNGVSIPIRDHVH--GKAVLTLNSDLRIHEWRK 144 Query: 141 REIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEI 200 + I++D + L L++ L+A + + P S+REKE+L+W A GKT+ E Sbjct: 145 YKRGIIADAIYLG--CLLQSDLVAGIAGGE-----PGPRLSRREKEVLKWAAVGKTAWET 197 Query: 201 AMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 A I+++S +TVN H N K++ NKT A LI Sbjct: 198 AQIMTVSNSTVNHHLYNACAKLDVANKTHAVAKAIRAQLI 237 >UniRef50_Q3SUZ7 Transcriptional regulatory protein, LuxR family n=6 Tax=Bradyrhizobiaceae RepID=Q3SUZ7_NITWN Length = 241 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 69/246 (28%), Positives = 108/246 (43%), Gaps = 33/246 (13%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPK-----VAFYTNYPEA 66 T + R + T E+ + A+ L + + L P+P + V + +P+A Sbjct: 11 TFIARVDKASTPAEIADAVVDVARPLGFSHV-LAGIIPIPGMTAEQQISNVVLH-RWPKA 68 Query: 67 WVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWE----------AARAHGLR 116 W Y K +L DP + N S +W SE +P + AR L Sbjct: 69 WSERYFTKGYLFDDPTIQRVNTSTEPFLW-----SELEPTYRNTPAPTRVMGEAREFNLG 123 Query: 117 RGVTQYLMLPNRALGFLSFSRCSAR-EIP-ILSDELQLKMQLLVRESLMALMRLNDEIVM 174 G T ++ N FS S R E+P IL +LQL ++ A R + Sbjct: 124 CGFTVPMITLNGQTA--GFSLASERAEVPSILRGQLQLI-------AMYAFARALGQKYK 174 Query: 175 TPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 +N + RE +IL+W AEGK+ EI++IL +SE+ V+ + ++ K+NA N+TQ A Sbjct: 175 PAPVNLTPREMDILQWMAEGKSDWEISVILKVSEHLVDKIARQLRAKLNATNRTQTVAVA 234 Query: 235 AATGLI 240 LI Sbjct: 235 LRHNLI 240 >UniRef50_A4ELE0 Transcriptional regulator, LuxR family protein n=5 Tax=Rhodobacteraceae RepID=A4ELE0_9RHOB Length = 202 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 91/207 (43%), Gaps = 18/207 (8%) Query: 36 QLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMW 95 QL Y + +R F +V +P+ W+++Y + F+ DPV+ + G + W Sbjct: 12 QLAPSGYYIALRIGFAFPMEEV---NAFPQGWIAHYTKQRFMLFDPVVKWAYGNVGTIRW 68 Query: 96 NDDLFSEAQPLWEAARAHGLRRGVTQYLM--LPNRALGFLSFSRCSAREIPILSDELQLK 153 + + + A+ G+R GVT + + F SF+R D L+ Sbjct: 69 FKLAEDDPKRIIAQAQTFGMRFGVTVSVFDSSADAQRSFASFTRSD-------RDYTDLE 121 Query: 154 MQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNF 213 ++LL L L R ++E P N +K E E L +GK EIA LS+SE V Sbjct: 122 VKLL----LAYLTRRHNETA--PPTNLTKAELEALGMVKDGKRLKEIAFELSVSEGAVKQ 175 Query: 214 HQKNMQKKINAPNKTQVACYAAATGLI 240 KN + K+ A TQ A A GLI Sbjct: 176 RLKNAKLKLGAKTGTQAAALANQYGLI 202 >UniRef50_B9TKR4 Transcriptional activator protein ahyR/asaR, putative n=1 Tax=Ricinus communis RepID=B9TKR4_RICCO Length = 234 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 14/189 (7%) Query: 59 FYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAH 113 F+ ++P W+ Y +NF+A D + W + L Q +W+ Sbjct: 51 FFQDWPPDWLELYVNRNFVAADYGVAEARRRIAPFTWREAKAERTLSRAEQDIWDTVVEW 110 Query: 114 GLRRGVTQYLMLPNRALGFLSFSRCSAREIPI---LSDELQLKMQLLVRESLMALMRLND 170 G G++ + P G+ + + +E P+ L +LQ ++ L E AL L Sbjct: 111 GWTDGLSVPIHGPG---GYFAIVTMAGKEQPMPPALRGKLQ-QLAFLTHERCRALTGLAP 166 Query: 171 EIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQV 230 V P+ + RE E LRW A GKT +IA +L +S+ T H ++K+ A ++Q Sbjct: 167 --VTDPQATLTHRELECLRWVAAGKTDLQIARLLGVSQTTARTHIDQARRKLGARTRSQA 224 Query: 231 ACYAAATGL 239 +GL Sbjct: 225 VARLVLSGL 233 >UniRef50_Q2RNV6 Transcriptional regulator, LuxR family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RNV6_RHORT Length = 260 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 66/243 (27%), Positives = 101/243 (41%), Gaps = 46/243 (18%) Query: 17 FQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNF 76 F R+ YH + L+ Y V H NY ++W +Y + F Sbjct: 33 FARLGFPHSCYHVVRLEGAGARLPY----VLH-------------NYKDSWSEHYFREGF 75 Query: 77 LAIDPVLNPENFSQGHLMWNDDLFSEA-----QPLWEAARAHGLRRGVTQYLMLPNRALG 131 L IDPVL Q +W++ + E+ + ++ AR GL G + +P R Sbjct: 76 LEIDPVLATCPDRQLPFLWSEAIAPESLSHDQRRMFSDARDAGLHDGYS----VPIRG-- 129 Query: 132 FLSFSRCSAREIPILSDELQLKMQLLVRES-----LMALM--RLNDEIVMTPEMN----- 179 S + ++ ++ + L+ E L+AL R V+ ++ Sbjct: 130 ----SHGEFATVTVIPEQGGDAARRLIGEQKHLVHLLALYFDRHARSTVINARLSSRRRK 185 Query: 180 --FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAAT 237 S RE+E+LRW A GKTS EIA I IS +V FH N +KK+ +KT A Sbjct: 186 TVLSPREQEMLRWAALGKTSWEIAEIAGISTKSVEFHLDNAKKKLGTYSKTHAVVKALTL 245 Query: 238 GLI 240 GL+ Sbjct: 246 GLV 248 >UniRef50_Q19U14 Transcriptional activator AlpR n=1 Tax=Azospirillum lipoferum RepID=Q19U14_AZOLI Length = 234 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 12/221 (5%) Query: 24 EEVYHEIELQAQQLEYDYYSLCVRHPVPFT---RPKVAFYTNYPEAWVSYYQAKNFLAID 80 + ++ E A +L Y +Y+ P P A NYP WV++Y + + ID Sbjct: 19 DALFRRFESAATELGYPFYAFGALWGDPDAIKLNPAPAVRLNYPAEWVAHYFSTGYNKID 78 Query: 81 PVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRAL-GFLSFSRCS 139 PV+ ++Q + W D+L S ++ A GLR G+ +P RA+ G S Sbjct: 79 PVVLVAPYAQTSVTW-DELRSYRPEFFDDAATFGLRSGIA----IPLRAIQGCYVLCVAS 133 Query: 140 AREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAE 199 + PI E + +++L A RL + + + + +++R + G ++AE Sbjct: 134 GDDRPIRPKE-RARLELFAHGLFAAYQRLRE--LPAQDHGLTANTVQVIRLSMAGLSTAE 190 Query: 200 IAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 I L ++ + V++ K+ +KK+ N QV A G++ Sbjct: 191 ICSRLKLTMDGVHWCLKDARKKLKCANTAQVYLKAIQQGIV 231 >UniRef50_C4XN36 LuxR family transcriptional regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XN36_DESMR Length = 257 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 13/186 (6%) Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAAR-------AHG 114 NYP W+ Y+ KNF ID V+ NF+ + D + +P E HG Sbjct: 75 NYPVEWLQTYKEKNFSGID-VIVKRNFTSFTPQYWDHTYKAHKPAREFITLASDFNLIHG 133 Query: 115 LRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVM 174 G + +L SFS + P + LQ + L L + + ++ Sbjct: 134 YTYGARPFGFCKQASL--FSFSGNFKKYDPTVIAILQTIVPHL---HLASSRIIESRLIQ 188 Query: 175 TPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 S RE+E+L W GK+S +I+ IL ISE TVN+H N+ KK++ N+ Q A Sbjct: 189 HNRKLLSGREREVLSWLKHGKSSWDISTILQISECTVNYHIYNIIKKLDVQNRPQAVAVA 248 Query: 235 AATGLI 240 G++ Sbjct: 249 THLGIL 254 >UniRef50_D2U307 Quorum-sensing transcriptional activator n=1 Tax=Arsenophonus nasoniae RepID=D2U307_9ENTR Length = 257 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 18/204 (8%) Query: 36 QLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMW 95 + Y Y L R+P ++ TNYP+ WV Y+ +N+ IDPV+ W Sbjct: 40 EFRYAYIILNKRNP-----AELFAITNYPDQWVEIYKERNYQQIDPVVIFALNRVSPFEW 94 Query: 96 NDDLFSEAQ----PLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDEL- 150 ++ L + +++ ++ + + G T L N L LS S+ + I Sbjct: 95 DESLSINSNVDFSKIFDISKDYNVVNGYTFVLHDYNNRLAMLSIMMVSSEVVEIKKKIKE 154 Query: 151 ---QLKMQLL-VRESLMAL----MRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAM 202 L M LL V E + +L +R N + + + FS RE EIL W + GKT +EIA Sbjct: 155 HKNDLHMLLLDVHEKITSLYREMIRQNYQNPASGKECFSPRENEILYWASMGKTYSEIAT 214 Query: 203 ILSISENTVNFHQKNMQKKINAPN 226 IL I TV FH ++ KK+ N Sbjct: 215 ILGIKLGTVKFHIGSVVKKLGVMN 238 >UniRef50_B1M2Q8 Transcriptional regulator, LuxR family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2Q8_METRJ Length = 242 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 8/183 (4%) Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWN---DDLFSEAQPLWEAARAHGLRR 117 + PE W Y + + DP + + WN D + + + EA G+R Sbjct: 64 STMPEGWARRYVTQGYALHDPTVRRLCTTATPFDWNAVLPDTPTAGRVMNEAGE-FGIRA 122 Query: 118 GVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPE 177 G+T + + G +S S I I E ++ + L+ ++ L+ +N Sbjct: 123 GITVPFVTLDGEPGGIS---VSGERIEIDPAE-RVAVNLVATYAVGQLLLMNSRPAAPAP 178 Query: 178 MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAAT 237 S RE+E L+W AEGKT EI M++ I+ V++H ++ + K++ N+ A + Sbjct: 179 ARLSPREREALQWAAEGKTDVEIGMVMGITAAGVDYHLRSARAKLDTVNRAHTVAQALRS 238 Query: 238 GLI 240 GLI Sbjct: 239 GLI 241 >UniRef50_C5B5L7 Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B5L7_METEA Length = 296 Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 64/244 (26%), Positives = 103/244 (42%), Gaps = 43/244 (17%) Query: 30 IELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFS 89 + L A + ++ +S V T + + + W Y ++ FL +DP L S Sbjct: 61 LHLTATKAGFESFSFLNGATVASTSESIIMTVS--KDWQDTYFSEGFLDVDPCLMRALTS 118 Query: 90 QGHLMWND--------DLFSEAQPLWEAARAHGLRRGVTQYL-MLPNRALGFLSFSRCS- 139 MW+D A+ EAAR HG G+ L ++ + + SF CS Sbjct: 119 NSSFMWSDIELPPVVNGKVPGARRTMEAARDHGYVDGLVLPLHLVDTKGSPYNSF--CSL 176 Query: 140 -----AREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMN--------------- 179 R +P +S + +L +++ +L D ++P+++ Sbjct: 177 FWKEDERLLPEVSRRYGHYLHML---AMLWEQKLQD---LSPQLSTGMLGSISVLGNARS 230 Query: 180 ---FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAA 236 S RE+++L W A GKT+ E A+IL +S TVN H QKK+ A NKT A Sbjct: 231 TKALSGRERDVLAWAAHGKTAGETALILGLSMETVNHHLGKAQKKLMAANKTHAVAIAIN 290 Query: 237 TGLI 240 G+I Sbjct: 291 RGVI 294 >UniRef50_Q11FX6 Transcriptional regulator, LuxR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11FX6_MESSB Length = 265 Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 18/230 (7%) Query: 22 TAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPK-----VAFYTNYPEAWVSYYQAKNF 76 T EEV H + + Q+ Y SL P + +PE W Y + + Sbjct: 42 TTEEVNHSLMIFLQR--YGVTSLIAGMIPPSNSSRREQLSYVLLDGWPEEWKRRYFSLGY 99 Query: 77 LAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVT-QYLMLPNRAL 130 L DP ++ H W++ + + + AR LR GVT + L ++ Sbjct: 100 LHRDPAIHLVRRGCPHFHWSEIREHCSVCPIGRRIMNEAREFQLRAGVTFSFPTLESKTF 159 Query: 131 GFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRW 190 GFL +A E+ + +L +Q + L + L +V ++ S+R++E++ W Sbjct: 160 GFL----VAAEELDLAETDL-FTLQFVAAFGLGCALTLAGGVVGRSNVHLSRRQREVVAW 214 Query: 191 TAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +EG T+ EIA L++S +T + H + ++ ++ N A GLI Sbjct: 215 ASEGLTADEIAERLNVSVHTADMHLRAVRTRLGVANTVHAVAEALRLGLI 264 >UniRef50_P54293 Transcriptional activator protein esaR n=7 Tax=Enterobacteriaceae RepID=ESAR_ERWST Length = 249 Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 21/207 (10%) Query: 38 EYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND 97 +Y Y + ++P V ++YP+ W+ Y+A NF DPV+ W++ Sbjct: 30 DYAYTVVSKKNP-----SNVLIISSYPDEWIRLYRANNFQLTDPVILTAFKRTSPFAWDE 84 Query: 98 D--LFSEAQ--PLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDEL--- 150 + L S+ + ++ ++ + + G T L L LS + L L Sbjct: 85 NITLMSDLRFTKIFSLSKQYNIVNGFTYVLHDHMNNLALLSVI-IKGNDQTALEQRLAAE 143 Query: 151 QLKMQLLVRESLMALMRL-NDEIVMTPEMN-------FSKREKEILRWTAEGKTSAEIAM 202 Q MQ+L+ + + RL E P +N FS RE E+L W + GKT AEIA Sbjct: 144 QGTMQMLLIDFNEQMYRLAGTEGERAPALNQSADKTIFSSRENEVLYWASMGKTYAEIAA 203 Query: 203 ILSISENTVNFHQKNMQKKINAPNKTQ 229 I IS +TV FH KN+ K+ N Q Sbjct: 204 ITGISVSTVKFHIKNVVVKLGVSNARQ 230 >UniRef50_B1Z7Q1 Transcriptional regulator, LuxR family n=3 Tax=Methylobacterium RepID=B1Z7Q1_METPB Length = 243 Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 59/236 (25%), Positives = 101/236 (42%), Gaps = 13/236 (5%) Query: 13 MLLRFQRMETAEEVYHEI--ELQAQQLEYDYYSLCVRHPVPF-TRPKVAFYTNYPEAWVS 69 +L R + E++ I L A +EY ++ + +P T+ N + W Sbjct: 12 ILKSLDRAHSREDILRAIMPRLNAMGIEYVISAMIPQKRLPARTQKNFVILENTSDEWNR 71 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWNDDLFS-----EAQPLWEAARAHGLRRGVTQYLM 124 Y +K ++ DP++ S W++ + +A+ + A GL G T L Sbjct: 72 LYFSKGYMYFDPIVQATLSSTTGFRWSETDPAGLQDPKARQVMNEAVEFGLGDGFTVPLA 131 Query: 125 LPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKRE 184 G L+F+ R++ I Q M L+ ++ L D M + RE Sbjct: 132 TLEEERGGLTFA---GRQLDISPG--QRGMLTLIASYVVGQTLLIDNGPSERRMGLTPRE 186 Query: 185 KEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +E L+W AEGKT EI ++ IS + V+FH ++ + K+ ++TQ GLI Sbjct: 187 RESLQWVAEGKTDWEIGELMGISRHGVDFHLRSARVKLGCVSRTQAVAEGFRRGLI 242 >UniRef50_A2SMG0 Putative LuxR-family transcriptional regulator n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SMG0_METPP Length = 237 Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 61/226 (26%), Positives = 93/226 (41%), Gaps = 14/226 (6%) Query: 24 EEVYHEIELQAQQLEYDYYS--LCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDP 81 +E E+ A++L ++ S V HPV T + N P+A+ + +DP Sbjct: 16 DEFRGEVVRFAKRLGFETVSAITVVDHPVGDT--EFVAIDNAPDAYKDAIEDPKAGQLDP 73 Query: 82 VLNPENFSQGHLMWNDDLFSEAQ--PLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCS 139 V+ ++W+ + A +WEA G R G+ L +P + R Sbjct: 74 VMQHCKRQSVPIIWDQSTYVSAGQGSMWEAQARFGFRTGICLALHMPEGRHFVIGVDRDQ 133 Query: 140 A-----REIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEG 194 A E+ L +LQL V A+ L E + + RE + LRWT +G Sbjct: 134 ALPKDRGEVTRLVADLQL---FAVHAQDTAMRVLVPERLQLERPKLTPRELDSLRWTMDG 190 Query: 195 KTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 KT+ E+ I+ ISE T H N K+ NK Q A GL+ Sbjct: 191 KTAWEVGSIMGISERTAVLHINNAMHKLACTNKHQAVLKALRLGLL 236 >UniRef50_Q2YJ50 HTH-type quorum sensing-dependent transcriptional regulator vjbR n=35 Tax=Brucellaceae RepID=VJBR_BRUA2 Length = 259 Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 20/191 (10%) Query: 64 PEAWVSYYQAKNFLAIDPVL--------NPENFSQGHLMWNDDLFSEAQPLWEAARAHGL 115 P WV+ Y +KN+ AIDPV N + L + D+ L A HGL Sbjct: 66 PATWVARYSSKNYFAIDPVFQEDAPYYRNDTSAIARDLKEDADICPAVAELLHDAEKHGL 125 Query: 116 RRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRL-NDEIVM 174 L + A + C+ + DE + + +R L++L + + + Sbjct: 126 GN-----LFIAVSARNPKGVAGCTVFTFEV-EDEDRTQFLARMRPRLLSLAGIIHGTVCG 179 Query: 175 TPEMN-----FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQ 229 + N + RE + LRW A GKT EIA ILSI+ TV + +N + K+N N+T Sbjct: 180 CKDANSVASLLTPREVDCLRWAANGKTDGEIAEILSIARWTVVTYLQNAKIKLNCSNRTS 239 Query: 230 VACYAAATGLI 240 A + G+I Sbjct: 240 AVATALSLGII 250 >UniRef50_A5EJ34 Putative transcriptional activator n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EJ34_BRASB Length = 213 Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 53/193 (27%), Positives = 84/193 (43%), Gaps = 21/193 (10%) Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLF----SEAQPLWEAARAHGLR 116 T YP AWV Y+A + IDPV+ + W+ D F + + E A +R Sbjct: 27 TTYPSAWVEQYRANRYDRIDPVIARSVATTLPFAWSTDQFDALNNRQKWFLEEASEFEIR 86 Query: 117 RGVTQYLMLPNRALGFLSFSRCSAR-----EIPILSDELQLKMQLLVRESLMALMRLNDE 171 GVT + + L+ + C AR +I EL L ++ RL D Sbjct: 87 HGVTIPIHDRQGKVATLTLAACEARSAFEAQISKYRHELHLI-------AIYLYARLRD- 138 Query: 172 IVMTPEM----NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNK 227 + TP ++RE+ L+W A GK++ + A I+++S TV FH +N ++K+ Sbjct: 139 VTPTPASPLRPCLTQRERICLQWAARGKSALDTAEIINVSRRTVVFHTQNAKRKLGVATV 198 Query: 228 TQVACYAAATGLI 240 Q A +I Sbjct: 199 QQAVAKGLAYDII 211 >UniRef50_C9NVD6 Transcriptional activator protein luxR n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NVD6_9VIBR Length = 240 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 10/230 (4%) Query: 17 FQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNF 76 +Q +++ E + +E + +Y+ L V + N+P Sbjct: 11 YQTIDSIESMGRLLEQLNHIVNSEYFVLGVSFDPHIKNGRFIVVDNFPADCREDSCNLGL 70 Query: 77 LAIDPVLNPENFSQGHLM---W--NDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALG 131 + +DP+ F + M W + + +Q L+ + G+ +G++ + N +G Sbjct: 71 MYVDPICK---FGASNCMPSVWESSKQIDIHSQELFSLSHIQGIEQGISIPIHGLNGEVG 127 Query: 132 FLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEI-VMTPEMNFSKREKEILRW 190 LSF+ P +D L L QL+V + L RL+ + + RE + L W Sbjct: 128 MLSFATSDVIAYPTHTDVL-LFAQLIVPLIVQNLSRLSHASQTEHSQAMLTNREIQCLTW 186 Query: 191 TAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 A+GK+++EIA I+ +E TV FH N KK+ A N+ Q A G I Sbjct: 187 AADGKSASEIADIVDCTERTVKFHLSNACKKLGATNRCQAVTRALLGGHI 236 >UniRef50_Q4ZNG4 Regulatory protein, LuxR n=8 Tax=Pseudomonas syringae group RepID=Q4ZNG4_PSEU2 Length = 77 Score = 65.9 bits (159), Expect = 1e-09, Method: Composition-based stats. Identities = 29/65 (44%), Positives = 45/65 (69%) Query: 175 TPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 +P N ++RE E+L+W+AEGKT+ +IAMIL + E T++FH + +K+ NKT A A Sbjct: 12 SPAKNLTQREIEVLKWSAEGKTAGDIAMILCLKERTIHFHIASAIQKMGVCNKTAAAVQA 71 Query: 235 AATGL 239 A +G+ Sbjct: 72 ALSGM 76 >UniRef50_Q2NS60 Transcriptional activator n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NS60_SODGM Length = 240 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 11/189 (5%) Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120 ++YP W++ Y+ + IDPV+ W ++ Q ++ + + L G T Sbjct: 53 SDYPAGWLNQYRNYGYQKIDPVMLIACRKFTPFSWKNNPNMPDQNFYKMSSDYALDNGYT 112 Query: 121 QYLMLPNRALGFLSFSRCSAREI--PILSDELQLKMQLLVRESLMALMRLND-------E 171 L P+ L L+ S+ + I+ E + K Q+L+ + ++R D E Sbjct: 113 FTLHDPDNNLATLTISQMKQNAVFYDIIEKE-KDKFQMLLITTHEKVIRFFDARKEQGSE 171 Query: 172 IVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVA 231 P S REKE+L W + GKT EI+ ILSI E TV FH +N+ K+ N Sbjct: 172 SEEEP-CRLSPREKEVLFWASVGKTYNEISTILSIREGTVKFHIRNIINKLGVANAKHAI 230 Query: 232 CYAAATGLI 240 A L+ Sbjct: 231 TRAMELKLL 239 >UniRef50_C8SVZ2 Transcriptional regulator, LuxR family n=2 Tax=Mesorhizobium RepID=C8SVZ2_9RHIZ Length = 242 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/221 (24%), Positives = 101/221 (45%), Gaps = 15/221 (6%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYY---SLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 + + +AE + HE L ++ + L V H + R +A + W Sbjct: 13 ITKIDTARSAEAILHEFRLAMERYGLRNFLITGLPVPHGTDWQREILA--DGWSPEWHHR 70 Query: 71 YQAKNFLAIDPVL-----NPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLML 125 Y ++ + DP + +PE F L L + A+ + + A G++ G+ + + Sbjct: 71 YVSEEYFLHDPCVAQCRHSPEPFRWAELP-AARLVARAKLVMDEAAEFGMKEGICVPIHV 129 Query: 126 PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREK 185 P G ++ + ++P + L + + SL L D TP + RE+ Sbjct: 130 PLAGPGVVTMAS-DRMDVPPSAMPLIETLCVHTFRSLSGLGTPGDGYEPTP---LTARER 185 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPN 226 E+L W+A+GK++ +IA IL ++ NTV HQ+N++ K++A N Sbjct: 186 ELLEWSAQGKSTDDIACILGVTRNTVESHQRNIRAKLDAIN 226 >UniRef50_A6U9S1 Regulatory protein LuxR n=3 Tax=Rhizobiaceae RepID=A6U9S1_SINMW Length = 246 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 80/185 (43%), Gaps = 23/185 (12%) Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWNDDL--FSEAQPLWEAARAHGLR-RGVTQYLMLPN 127 Y + IDP+L + W F E +PL+ AA GL GV L P Sbjct: 67 YAVRGLHRIDPILKLALGGVRPVEWATARRRFPECEPLFVAAEEIGLSTEGVALPLPSPA 126 Query: 128 RALGFLSFS------------RCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT 175 + L+ S RC R+ + ++ M + S MA + DE Sbjct: 127 GRMALLAISANMSPVEWSAYRRCHLRDFQLAANLFHASM---LEHSAMA-GAMEDE---- 178 Query: 176 PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 ++ + RE E+L W+A GK+ EIA IL ISE TV F N ++K+N + TQ +A Sbjct: 179 RDLRLTGRETEVLTWSAAGKSYWEIATILGISERTVRFFMTNARRKLNVVSNTQAVAHAV 238 Query: 236 ATGLI 240 LI Sbjct: 239 RHALI 243 >UniRef50_C4K6Q5 Autoinducer response regulator n=2 Tax=Enterobacteriaceae RepID=C4K6Q5_HAMD5 Length = 235 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 14/179 (7%) Query: 57 VAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQ----PLWEAARA 112 + +N PE W Y N IDPV+ W++++ ++ + + A+ Sbjct: 41 ICIISNCPE-WFDIYLEFNHQLIDPVVIKALSRVEDFEWDENILISSKLALPKVLDQAKT 99 Query: 113 HGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQL---KMQLLVRESLMALMRLN 169 + + RG T L + L LS + P+ +++ + KM LL+ ++ L+ L Sbjct: 100 YDISRGHTFVLHDYKQNLAILSI----FDDRPLKTNDFFIDREKMYLLLVKTHQKLLSLY 155 Query: 170 D--EIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPN 226 + EI + SKRE EIL W + GKT EI+ I+ I E ++ FH KN+ K+ A N Sbjct: 156 EKFEIPTKKNIGLSKRENEILHWASIGKTYQEISKIIGIKECSIKFHMKNITNKLGAIN 214 >UniRef50_Q48KM4 Transcriptional regulator, LuxR family n=6 Tax=Pseudomonas syringae group RepID=Q48KM4_PSE14 Length = 240 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 21/189 (11%) Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120 N +AW Y+ + F+ DPV+ G + W D P+ + V Sbjct: 63 CNVDDAWGKAYRQREFITQDPVIRCYRNQLGFVNWQDAF--RQYPV-----SACYEEIVV 115 Query: 121 QYLMLPNRALGFLSFSR--------CSAREIP-ILSDELQLKMQLLVRESLMALMRLNDE 171 +LP + G+++ R C+ E+ +S E + M SLM ++ Sbjct: 116 TCELLPAISYGYMNHCRGADSVTSVCTLGEVGRAISAEQKYLM-----SSLMPVLHSVAR 170 Query: 172 IVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVA 231 + + RE E+L+W +GKT+ EI+MI +SE+TV +H K + K+ N+ Q Sbjct: 171 GLKFCSRGLTHRELEVLQWARDGKTAWEISMIRDVSESTVKYHLKTIYSKLGVANRAQAV 230 Query: 232 CYAAATGLI 240 A GLI Sbjct: 231 GEALCRGLI 239 >UniRef50_Q2K2Q3 Autoinducer transcriptional regulator protein n=15 Tax=Rhizobiales RepID=Q2K2Q3_RHIEC Length = 261 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 21/198 (10%) Query: 51 PFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFS-QGHLMWND-DLFSEAQPLWE 108 PF R T YP++WVS Y +++ +DP++ E FS Q W + D+ AQ Sbjct: 69 PFVR------TTYPDSWVSRYLLNDYINVDPIIR-EGFSRQLPFDWREIDITETAQEFMV 121 Query: 109 AARAHGLRRGVTQYLMLPNRALGFLSFSRCSARE------IPILSDELQLKMQLLVRESL 162 A HG+ ++ LS + + E L + L+L LL R+++ Sbjct: 122 DAELHGIGTNGVSVPIVDKSRRSLLSINSQKSDEEWTLIERQFLPEWLELGF-LLHRKAV 180 Query: 163 MALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKI 222 L ND P RE E L W + GK S +I IL +SE+T + K+ + K+ Sbjct: 181 FELHGEND-----PVPALGSREIECLHWASRGKDSKDIGKILGLSEHTTRGYLKSARYKL 235 Query: 223 NAPNKTQVACYAAATGLI 240 P + +A LI Sbjct: 236 GCPTLSAAIAHAVHLNLI 253 >UniRef50_A5G659 Transcriptional regulator, LuxR family n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G659_GEOUR Length = 250 Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 11/184 (5%) Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFS----EAQPLWEAARAHGLRR 117 +YP W+ Y+ NF +DP+ ENF L + D F+ EA+ L AA L Sbjct: 70 SYPAEWLDAYRTNNFHLLDPI-TTENFKNYSLQYWKDTFNTYDVEAKFL-SAALDFRLVD 127 Query: 118 GVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR-LNDEIVMTP 176 G + R G + ++ P +L + LL A + L+ E Sbjct: 128 GYAIGITNSFRTEGCIFSISGPIKKEP----RNELVLNLLAPHLHQAFRQVLSVEKKGKI 183 Query: 177 EMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAA 236 + RE+E+L W +GK+S +I+ IL+ISE TV FH N+ +K++A ++ A + Sbjct: 184 STTITIREREVLNWIKKGKSSWDISTILAISERTVKFHVDNVMRKLDAVSRIHAVAVALS 243 Query: 237 TGLI 240 GLI Sbjct: 244 VGLI 247 >UniRef50_Q161C2 Transcription regulator, LuxR family, putative n=2 Tax=Roseobacter RepID=Q161C2_ROSDO Length = 248 Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 18/201 (8%) Query: 50 VPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDD-----LFSEAQ 104 +P ++P YPE WV Y +DP+ + W++ L E + Sbjct: 48 LPGSKPLGIVSDGYPEGWVCEYLQSELFRVDPIPQLASILSRPFRWSEAPKLMRLSPEGE 107 Query: 105 PLWEAARAHGLRRGVTQYLMLPNR-----ALGFLSFSRCSAREIPILSDELQLKMQLLVR 159 + GL GV + PN LGF ++ P L+ + ++Q + Sbjct: 108 RYMQTLAQSGLGDGVAMQVYGPNMRNAYVGLGF-------GKQDPDLTADEIFELQCAAQ 160 Query: 160 ESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQ 219 + + L + E + S RE EIL+W A GK+++ IA IL IS +TV+ + + Sbjct: 161 IAHIRYCELTEFRQRVAE-SLSPREVEILQWIARGKSNSVIAEILGISRHTVDTITRRIF 219 Query: 220 KKINAPNKTQVACYAAATGLI 240 +K++ ++T A +GL+ Sbjct: 220 EKLDVNDRTTAAIRGLGSGLV 240 >UniRef50_C5B507 LuxR type transcriptional regulator n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B507_METEA Length = 242 Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 50/223 (22%), Positives = 93/223 (41%), Gaps = 11/223 (4%) Query: 24 EEVYHEIELQAQQLEYDYYSLCVRHPVPFTR-PKVAFYTNYPEAWVSYYQAKNFLAIDPV 82 ++V H +E + ++++ + P P R +V P W +Y N++ +DPV Sbjct: 23 DQVAHSVERILAEFGFEHFVI-TGLPNPNDRLDQVLLIRRLPAGWFEHYARHNYMYLDPV 81 Query: 83 LNPENFSQGHLMWNDDLFS-EAQP----LWEAARAHGLRRGVTQYLMLPNRALGFLSFSR 137 + W + + E +P + + A G+ RG + + P S S Sbjct: 82 FRNCRATTSPFDWGEAPYDPETEPGAIEVMQRATDFGMARGFSVPIHGPEGCEACFSMSG 141 Query: 138 CSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTS 197 + P L+ + + ++ + ++ P ++RE+E+L W A GK+S Sbjct: 142 RN----PDLTGRTKPAVHMIAMYAFERARQVGRRPAKPPSNPLTQREQEVLTWAALGKSS 197 Query: 198 AEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + A I+ I+E T H N K+ A N+TQ A + I Sbjct: 198 RDTAEIMQITERTALAHAVNATHKLGAANRTQAVVRAMQSKFI 240 >UniRef50_B0U8W7 Transcriptional regulator, LuxR family n=4 Tax=Methylobacterium RepID=B0U8W7_METS4 Length = 245 Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 59/248 (23%), Positives = 99/248 (39%), Gaps = 12/248 (4%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEI--ELQAQQLEYDYY-SLCVRHPVPFTRPKV 57 M K R +L R T E V ++ L +E+ +L + VP R Sbjct: 1 MMSKRSLDLAREVLQAIHRTATPENVRDQLLRTLAGVGVEHVLLATLRICDAVPCDRRPT 60 Query: 58 AFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSE-----AQPLWEAARA 112 F YP+ W Y A++++ DPV+ W+D A+ + + A Sbjct: 61 VFAGTYPDEWARRYYARDYILHDPVVRGVGERGSGFAWSDPGLCAPDDRAARRVLDEAGE 120 Query: 113 HGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEI 172 GLR G T L+ +SF E LS ++ + L+ +L ++ L Sbjct: 121 FGLREGFTLPLLTLEGDTAGVSF----VGEKLDLSPAVRGMLTLVGTYALGQVLLLAKGE 176 Query: 173 VMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVAC 232 S RE+E L+W A+GK+ EIA + IS + H + +++K+ ++ Sbjct: 177 TGPLAEPLSPRERESLQWAADGKSDQEIADAMGISAHGAIRHLRAVRRKLGTTSRAHAVA 236 Query: 233 YAAATGLI 240 G+I Sbjct: 237 LGLRLGII 244 >UniRef50_A3UFL6 Transcriptional regulatory protein, LuxR family protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UFL6_9RHOB Length = 241 Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 85/203 (41%), Gaps = 17/203 (8%) Query: 49 PVPFTRPKVAF---YTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND-------D 98 P PF +F Y +PEA Y + DPV + + W D Sbjct: 43 PSPFDAADTSFDFEYNTFPEAMQDVYFEERLYDHDPVTSRAATALQPQFWFDVEQTTPGT 102 Query: 99 LFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKM-QLL 157 FS Q L+E R G G T + P G +F C +QL+M QL Sbjct: 103 RFS--QRLFELLRQSGFVDGFTIPVFGP---YGLAAFVACGRFSGAFNLTAIQLRMLQLG 157 Query: 158 VRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKN 217 +E + L D P + S+RE EIL+W A GK++A IA IL +S +TV+ + Sbjct: 158 CQELYSRTIMLRDYDAPAPP-HLSEREVEILQWLARGKSNAVIAAILGVSPHTVDTIMRR 216 Query: 218 MQKKINAPNKTQVACYAAATGLI 240 K+NA N+ A GLI Sbjct: 217 AFVKLNASNRIAAVLKALRVGLI 239 >UniRef50_B9JZN6 Transcriptional regulator LuxR family n=1 Tax=Agrobacterium vitis S4 RepID=B9JZN6_AGRVS Length = 241 Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 3/81 (3%) Query: 163 MALMRLNDEIVMTPEMN---FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQ 219 MA+ D + T MN S RE E+LRWTA+GKTS EI ILS+S++T+N + Sbjct: 160 MAVFDTYDRLRRTELMNVDVLSVRELEVLRWTAQGKTSVEIGQILSLSDHTINAYMTTAM 219 Query: 220 KKINAPNKTQVACYAAATGLI 240 KK++ N+TQ+ A LI Sbjct: 220 KKLDCVNRTQLVAKAIRLKLI 240 >UniRef50_A9D0L4 Putative LuxR/GerE family transcriptional regulator n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D0L4_9RHIZ Length = 245 Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 30/61 (49%), Positives = 41/61 (67%) Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 ++RE+E L WT+ GKTS EIA ILS+SE+TVN + N +K++A N+TQ A G Sbjct: 184 LTERERECLVWTSSGKTSVEIARILSLSEHTVNHYLNNAARKLDAVNRTQAVALAIRQGF 243 Query: 240 I 240 I Sbjct: 244 I 244 >UniRef50_A7IQ01 Autoinducer-binding domain protein n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IQ01_XANP2 Length = 233 Score = 62.8 bits (151), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 24/217 (11%) Query: 35 QQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLM 94 Q L +D Y+ PV ++ +NY W + Y +N+ IDPV+ ++ + Sbjct: 30 QDLGFDGYAYLNVQPV-----RIFAVSNYASEWQARYLTQNYAMIDPVVT---MAKAQMK 81 Query: 95 WNDDLF----SEAQPL---WEAARAHGLRRGVTQYLMLPNR-ALGFLSFSRCSAREIPIL 146 S ++PL + A G+R G++ +P R A G LS ++ + P L Sbjct: 82 AFAWAAAAPRSLSKPLRRFYSEASDFGIRSGIS----IPVRTAFGHLSMLTLASHK-PSL 136 Query: 147 SDELQLKMQLLVRE--SLMALMRLND-EIVMTPEMNFSKREKEILRWTAEGKTSAEIAMI 203 + E + V L A M D E + E++ ++ L+W+AEGKT +IA I Sbjct: 137 NLETDIDQIAAVTAVAQLHAKMEQQDAEPTASVEIDLKAKQALCLKWSAEGKTMKDIASI 196 Query: 204 LSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +S TVNFH N +K ++A + Q A LI Sbjct: 197 EGMSFATVNFHLNNARKALDAGSLAQATALATKLKLI 233 >UniRef50_B9J7F2 Transcriptional regulator protein n=10 Tax=Rhizobium/Agrobacterium group RepID=B9J7F2_AGRRK Length = 243 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 3/90 (3%) Query: 151 QLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENT 210 +L M +L + ++ ND V+ S RE E++RWTA+GKTS EI ILS+S++T Sbjct: 156 ELNMIMLQAHDIYNCIKRNDGSVLHM---LSARELEVVRWTAQGKTSVEIGQILSLSDHT 212 Query: 211 VNFHQKNMQKKINAPNKTQVACYAAATGLI 240 VN + N KK++ N+TQ+ A LI Sbjct: 213 VNAYMMNAIKKLDCVNRTQLVAKAIRLKLI 242 >UniRef50_B5A461 Quorum sensing regulator n=1 Tax=Mesorhizobium tianshanense RepID=B5A461_9RHIZ Length = 275 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 34/208 (16%) Query: 50 VPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQP---- 105 VP P +A YP WV Y+A+ ++ IDP + + W++ F +A+ Sbjct: 81 VPRQEPFIA--VTYPPEWVERYRARGYINIDPAIQIGLRRLLPIDWDE--FGKAEGDLRQ 136 Query: 106 LWEAARAHGLR-RGVT--QYLMLPNRALGFLS--FS--------RCSAREIPILSDELQL 152 + A GL RG++ + +RAL ++ FS R + R PI++ L Sbjct: 137 FFGEASEFGLGLRGISFPVHGCGGDRALFSVTADFSKREWHWARRTAFRHFPIIAAHLH- 195 Query: 153 KMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVN 212 A++R + P + S RE E LRWT+EGKT E +IL +S +TV Sbjct: 196 ----------EAVLRTDGVFRSQPRL--SPRELECLRWTSEGKTVWECGVILGLSPHTVR 243 Query: 213 FHQKNMQKKINAPNKTQVACYAAATGLI 240 + ++ + K+ A + T A A +GL+ Sbjct: 244 CYLESARHKLGASSNTHAASLATKSGLL 271 >UniRef50_A9CI30 Transcriptional regulator, LuxR family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=A9CI30_AGRT5 Length = 238 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 27/51 (52%), Positives = 40/51 (78%) Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQV 230 +KRE +++RWTA+GKTS EIA +LSISE+TVN + N +K++ N+TQ+ Sbjct: 177 LTKRELDVVRWTAQGKTSVEIAELLSISEHTVNTYMNNAMRKLDCVNRTQL 227 >UniRef50_B9JVS5 Transcriptional regulator LuxR family n=3 Tax=Agrobacterium vitis RepID=B9JVS5_AGRVS Length = 246 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 11/106 (10%) Query: 135 FSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEG 194 F RC R+I +L+ + L++ D + ++RE+E LRWTA G Sbjct: 146 FRRCHDRDIHLLAGKFH-----------AGLVKRCDGTRLGGVPTLTRREQETLRWTAAG 194 Query: 195 KTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 K+ E A+IL ISE TV + N + K++A + TQ A GLI Sbjct: 195 KSYWETAVILGISERTVRYFMANARTKLDAVSNTQAVAKALQRGLI 240 >UniRef50_A9D281 Probable transcriptional regulator protein, LuxR family n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D281_9RHIZ Length = 237 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 67/235 (28%), Positives = 104/235 (44%), Gaps = 17/235 (7%) Query: 17 FQRMETAEEVYHE--IELQAQQLEYDYYSLCVRH-PVPFTR--PKVAFYTNYPEAWVSYY 71 FQR++TA HE + LQA E+D+ + P F+ K +N P ++ Y Sbjct: 8 FQRLKTAT-TEHELAVSLQALTSEFDFRFFSIFDIPATFSDRLSKHIRLSNLPSEYIEEY 66 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWE--AARA----HGLRRGVTQYLML 125 + N L+ V S + DL + +P E RA H + GV + Sbjct: 67 DSLNLLSNSSVFAMLRQSTAPMTRFLDLAVKERPTEEQQVMRAVFEKHNMTMGVYFPVHG 126 Query: 126 PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREK 185 N ++F P LS + L V + A ++ ++ T + RE Sbjct: 127 SNGRRAAMAFYGTR----PALSFAETGVLGLCVLHAFDAYSKMTNK-TGTKANGITTREL 181 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E+L W A GKTS EIA ILS+S++TVN + + +K++ N+TQ+ A LI Sbjct: 182 EVLHWAANGKTSTEIAAILSLSDHTVNTYMNSAMRKLDCVNRTQLVAKALRLHLI 236 >UniRef50_B6R6S8 Transcriptional regulator, LuxR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R6S8_9RHOB Length = 239 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/229 (23%), Positives = 96/229 (41%), Gaps = 17/229 (7%) Query: 21 ETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAID 80 ET + V I Q + + L + + + W Y ++++ D Sbjct: 18 ETPDGVSKRIAELGQSFGFTSFCLAAIPEAGASFDGSIMLSGWRPEWQQRYLDRDYVQND 77 Query: 81 PVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSF 135 P++ + +W+ +L + AQ + AR +G+ GV + G L F Sbjct: 78 PIVAKARTASRPFLWSSVARDRNLTAAAQQVLSEARDYGMYDGVCVPVHGLQGYQGMLIF 137 Query: 136 S----RCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWT 191 R + REI +L + + + L+ N P + RE E L+W+ Sbjct: 138 GGPEVRLNEREISVLH-----LVGIYASNKVRELVGANTN---RPRHRLTPRELECLKWS 189 Query: 192 AEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 A GKTS EI+ IL+IS++T +++ + +K++A N+T GLI Sbjct: 190 AAGKTSWEISQILNISQHTADWYLASAARKLHAANRTHAVAEGFRLGLI 238 >UniRef50_A9DE85 Probable transcriptional regulator protein, LuxR family n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DE85_9RHIZ Length = 246 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/132 (34%), Positives = 68/132 (51%), Gaps = 17/132 (12%) Query: 116 RRGVTQYLMLPNRALGFLSFSRC--------SAREIPILSDELQLKMQLLVRESLMALMR 167 R GVT + P + F+ C SA E+P L + LLV + ++ + Sbjct: 122 RFGVTMGVYFPVQDGRGQRFAVCFMGARKPLSATELP----SLAMFATLLVDQ--LSQIT 175 Query: 168 LNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNK 227 N++ T ++ + RE E+L+WTAEGKTSAEIA I +SE+TVN + +K+ N+ Sbjct: 176 ANED---TAKLVLNARETEVLQWTAEGKTSAEIARITGLSEHTVNHYATIATQKLGCSNR 232 Query: 228 TQVACYAAATGL 239 TQ A GL Sbjct: 233 TQAVVQAIRLGL 244 >UniRef50_B3VN68 PanR n=1 Tax=Pantoea sp. CWB304 RepID=B3VN68_9ENTR Length = 246 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 13/178 (7%) Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQ----PLWEAARAHGLR 116 TN+ + WV Y N+ +DPV+ S +W++D+ +AQ ++ + + ++ Sbjct: 48 TNHAD-WVELYLKNNYQLVDPVIIKCLSSVESFLWDEDIMFKAQYKLPMIFRMGKNYDIK 106 Query: 117 RGVTQYLMLPNRALGFLSF---SRC-SAREIPILSDELQLKMQLL-VRESLMALMRLNDE 171 G T L N + LS C + IL+D +L+ L+ +++L + E Sbjct: 107 SGCTFVLHDYNNNMALLSIMMGEHCREETKTSILNDRDRLQSLLISAHTKILSLYQEESE 166 Query: 172 IVMTPEMN---FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPN 226 I+ + + RE ++L ++GKT +EIA L + E TV FH N+ KK+ N Sbjct: 167 IIQQEKKKPGLLTSRENDVLYLASQGKTYSEIACSLKVKEVTVKFHMANVVKKLGVMN 224 >UniRef50_A3T328 Autoinducer-binding transcriptional regulator LuxR n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3T328_9RHOB Length = 269 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/196 (28%), Positives = 86/196 (43%), Gaps = 28/196 (14%) Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQ-----GHLMWNDDLFSEAQPLWEAARAHGL 115 T Y WV +Y + + +DPVL+ + S GHL + ++ + A+ +G+ Sbjct: 84 TTYSTTWVEHYFSLKYQDVDPVLHAGSRSLLPVDWGHLSTTGE---TSRNFFGEAKEYGI 140 Query: 116 RRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR----LNDE 171 G T L +P R G L I + SD +L RE + L+D Sbjct: 141 --GETG-LTIPVR--GMLG----EEAMISLNSDLRARDWELFCREMISDFTYFAHLLHDS 191 Query: 172 IVM-------TPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINA 224 + T +KRE ++LRW A GKT+ E +IL ++E TV+F+ N K+ Sbjct: 192 VTRSRIHQHETDHPQLTKREAQVLRWAARGKTAWETGIILGLTEKTVSFYLGNACAKLKV 251 Query: 225 PNKTQVACYAAATGLI 240 KTQ +A LI Sbjct: 252 ATKTQAVAFAVKERLI 267 >UniRef50_Q46751 Transcriptional activator protein carR n=4 Tax=Enterobacteriaceae RepID=CARR_PECCC Length = 244 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/199 (28%), Positives = 88/199 (44%), Gaps = 28/199 (14%) Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDD----LFSEAQPLWEAARAHGLR 116 +NYPEAW+ Y K DP++ W+D+ L ++ Q ++ ++ H + Sbjct: 38 SNYPEAWMKEYIKKEMFLSDPIIVASLARITPFSWDDNDIVTLRAKNQDVFISSVQHDIS 97 Query: 117 RGVTQYLMLPNRALGFLS---------FSRCSAREIPILSDELQLKMQLL-VRESLMALM 166 G T L + + LS F +C + + E L+M L+ V E +MA Sbjct: 98 SGYTFVLHDHDNNVATLSIANHLEDANFEKC------MKNHENDLQMLLVNVHEKVMAYQ 151 Query: 167 R-LNDEIVMTPEMN-----FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQK 220 R +ND+ P N S RE E+L + G+T E++ IL ISE TV FH N + Sbjct: 152 RAINDQ--DNPPDNSRNALLSPRETEVLFLVSSGRTYKEVSRILGISEVTVKFHINNSVR 209 Query: 221 KINAPNKTQVACYAAATGL 239 K++ N A L Sbjct: 210 KLDVINSRHAITKALELNL 228 >UniRef50_B6R4Z6 Transcriptional regulator, LuxR family protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R4Z6_9RHOB Length = 254 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 80/188 (42%), Gaps = 23/188 (12%) Query: 61 TNYPEAWVSYYQAKNFLAIDP----VLNPENFSQGHLMWNDDLFSEAQPL----WEAARA 112 +N+ + WV +Y + ++ DP +L+ Q +W D + + R+ Sbjct: 68 SNHSQDWVEHYNSHHYYFKDPGMDHLLSGRKVDQ---LWTDYTVRPTSKVDSDFFNDVRS 124 Query: 113 HGLRRGVTQYLMLPNRAL-GFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDE 171 GL+ GVT L N+ L G SF+ C E L + Q+ V L + L Sbjct: 125 AGLKFGVTIPLECSNKHLVGGASFASC---ERTQLGFDAQMTSNYPV---LKGAVHLFHT 178 Query: 172 IVMTPE-----MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPN 226 PE F+ RE E L W G+ + EIA IL++SE TV H K KK+ N Sbjct: 179 YAQEPETLSEFFGFTPREHECLLWLTAGRANKEIAHILNLSEKTVEHHIKRACKKLRVTN 238 Query: 227 KTQVACYA 234 +T A Sbjct: 239 RTHAVARA 246 >UniRef50_C6Y3Z3 Regulatory protein LuxR n=2 Tax=Pedobacter heparinus DSM 2366 RepID=C6Y3Z3_PEDHD Length = 263 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 60/224 (26%), Positives = 93/224 (41%), Gaps = 36/224 (16%) Query: 47 RHPVPFT---RPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHL-MWNDDLFSE 102 RH VPF + Y N E + Y +++ FL E + + HL ++N ++F + Sbjct: 46 RHSVPFVYLLDYRTGLYINMSENFAGY-KSECFLKEGVSHTLEIYQRDHLQLFNKEIFPD 104 Query: 103 AQPL-----------------WEAARAHGLRRGVTQYLML-------PNRALGFLSFSRC 138 + W +G + Q P ++G L Sbjct: 105 RLNILQNIPPENHKNYVFSYNWCVENRNGASEKLLQRSCFLSDKSGNPMFSMGMLININN 164 Query: 139 SAREIPILS--DELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKT 196 E+PI+ DE+ + + + LN+E + SKREKE+L W AEG + Sbjct: 165 FGNELPIVQTVDEININGTAAHQTIYKKVYHLNEEDKL-----LSKREKEVLLWMAEGLS 219 Query: 197 SAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 S IA L ISE+TV H+++MQ K N PN + + GLI Sbjct: 220 SKLIADKLFISEHTVINHRRSMQDKTNTPNAVALVSFCIKNGLI 263 >UniRef50_A4C9D7 LuxR, transcriptional regulator n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C9D7_9GAMM Length = 233 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/63 (46%), Positives = 42/63 (66%) Query: 178 MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAAT 237 +NF+KRE E L+W EGKTS EI+ IL+I++ TVN+H N +K N+ N+ Q A Sbjct: 171 VNFTKREIECLKWATEGKTSWEISKILTITDRTVNYHIANCIRKTNSSNRQQAIAKFYAM 230 Query: 238 GLI 240 G++ Sbjct: 231 GIL 233 >UniRef50_Q13HW9 Transcriptional regulator, LuxR family n=3 Tax=Burkholderia RepID=Q13HW9_BURXL Length = 262 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/193 (29%), Positives = 87/193 (45%), Gaps = 27/193 (13%) Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND--DLF-SEAQPLWEAARAHGLRR 117 ++YP+ WV +YQ +++ DPV F W+D DL ++ + L EA+ A GL Sbjct: 82 SHYPKEWVQHYQRRDYALTDPVHRAAFFQSAPYRWHDIIDLTKADHRFLGEASEA-GLPA 140 Query: 118 GVT-------QYLMLPNRALGFLSF-SRCSAREIPILSDELQLKMQLL--VRESLMALMR 167 G++ ++L N A S S +AR ++S + ++ L + A + Sbjct: 141 GLSIPVHQSDGSVLLFNLAGPLHSVNSEINARRACLMSAQFNFELHRLGLIHSRRAARLL 200 Query: 168 LNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNK 227 +IV L W A GKTSAEI IL S TV++H K + +N + Sbjct: 201 TPCQIV-------------CLTWVARGKTSAEIGEILGCSHYTVDYHVKKAMEALNIWGR 247 Query: 228 TQVACYAAATGLI 240 T A A GLI Sbjct: 248 TAAAVQATVQGLI 260 >UniRef50_Q21EX4 Transcriptional regulator, LuxR family n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21EX4_SACD2 Length = 247 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 14/196 (7%) Query: 55 PKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND--DLFSEAQPLWEAARA 112 P ++ +NYP+ W Y + DPV+ + + W DL + E Sbjct: 52 PTISTISNYPDEWFKNYFEEGMQRHDPVVRYCMQNTSAIRWRQLMDLEHYVDAIGEKIMI 111 Query: 113 HGLRRGVTQYLMLPNRA-LGFLS-FSRCSAREIPILSDELQLKMQLL------VRESLMA 164 G+ L +P +A G ++ FS S RE L+ + + V E A Sbjct: 112 RASESGLCDGLSIPIKAPSGEIAIFSLASNRE-EGLNQRINACLPFAQSFGTQVFECYSA 170 Query: 165 LMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINA 224 LM ++ + + + REKE L W EGKT+ EI+ IL +SE TV FH + K+ A Sbjct: 171 LML---KLAQNKQTHLTAREKESLFWACEGKTTWEISKILDVSERTVIFHLSSATSKLGA 227 Query: 225 PNKTQVACYAAATGLI 240 N+ A +GLI Sbjct: 228 VNRQHAVAKAILSGLI 243 >UniRef50_A4XEP8 Regulatory protein, LuxR n=2 Tax=Sphingomonadaceae RepID=A4XEP8_NOVAD Length = 255 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 32/67 (47%), Positives = 38/67 (56%) Query: 174 MTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 + P SKRE E LRW A GKT EI+MI+ S TV FH N K+NA N++Q Sbjct: 185 LPPGSRLSKREVECLRWAAIGKTDLEISMIMGRSRATVRFHIHNASMKLNAVNRSQTVFK 244 Query: 234 AAATGLI 240 AA G I Sbjct: 245 AAQLGYI 251 >UniRef50_Q7CWE0 Transcriptional regulator, LuxR family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7CWE0_AGRT5 Length = 245 Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 55/232 (23%), Positives = 95/232 (40%), Gaps = 16/232 (6%) Query: 22 TAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDP 81 +A+ V E ++ ++Y+ + R + P+ W+ Y+AK + +DP Sbjct: 16 SADRVRSEFAKLIREYGFEYFLVSRRMTGELASAGQILAEHLPDGWLEVYRAKKYNLVDP 75 Query: 82 VLNPENFSQGHLMWNDDLFS--------EAQPLWEAARAHGLRRGVTQYLMLPNRALGFL 133 V W + L A + A +GL+ G Y + GF+ Sbjct: 76 VRKVIGMVHKPFQWKEALEGLPRAMHRKRASVFFHDAGRYGLQGG---YAFPVHGRAGFI 132 Query: 134 S--FSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMN---FSKREKEIL 188 F R++P L EL V L+ L P+++ ++RE E+L Sbjct: 133 GAVFIGGPDRQLPSLHVELLDAATRAVFWRLLDLSGQAHGFSNAPDVSALELTRREMEVL 192 Query: 189 RWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 A+G TS EI LSIS +TV+++ +Q++ +A N+ A GL+ Sbjct: 193 ALMADGMTSTEIGRQLSISNHTVDWYINGIQRRFSAKNRQHTVALAFRHGLL 244 >UniRef50_A6U6L8 Regulatory protein LuxR n=3 Tax=Rhizobiaceae RepID=A6U6L8_SINMW Length = 286 Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 30/61 (49%), Positives = 41/61 (67%) Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 S+RE + L WTA GKTS+EIA IL +SE+TVN + ++ KK++A N+TQ A G Sbjct: 225 LSEREIQCLNWTAAGKTSSEIAGILGLSEHTVNHYLNHVTKKLDAVNRTQAVVKAMKKGY 284 Query: 240 I 240 I Sbjct: 285 I 285 >UniRef50_Q11IH2 Transcriptional regulator, LuxR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11IH2_MESSB Length = 241 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 24/210 (11%) Query: 37 LEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWN 96 L + + L V P P V T P W+S Y + ++ DPV+ S W+ Sbjct: 36 LAHVSFHLNVSGAAPLDYPYV--RTTLPSQWISRYVLRTYVGHDPVMREGFSSLRPFSWH 93 Query: 97 DDLFSEAQ-PLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKM- 154 + SE + E AR+HG+ G Y +P + R S R + L+ +L L + Sbjct: 94 ELEMSEKEREFMEDARSHGI--GAQGY-SIP-------TVDRFSRRSLLSLTADLDLGLW 143 Query: 155 QLLVRESLMALMR---------LNDEIVMTPE-MNFSKREKEILRWTAEGKTSAEIAMIL 204 +R +++ LN+ + P + RE+E L WTA GK S +IA IL Sbjct: 144 AGFIRRHASSVIEISQVLHQKALNELGIGEPSGATLAPRERECLLWTARGKDSKDIAGIL 203 Query: 205 SISENTVNFHQKNMQKKINAPNKTQVACYA 234 +SE TV + + ++K+ +Q A Sbjct: 204 DLSEYTVRSYLRTARQKLQCRTLSQAVATA 233 >UniRef50_B3PCB5 Putative two-component transcriptional regulator, LuxR family n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PCB5_CELJU Length = 238 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 23/210 (10%) Query: 43 SLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND----- 97 L HP + F NYP WV Y + ++ IDPV + + G W++ Sbjct: 38 GLMTDHPRLKKEAEHGFLKNYPADWVERYFDQKYVHIDPVRHKAYDAIGAYTWDELKASM 97 Query: 98 -------DLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDEL 150 +F+EA+ +A +G+ GV+ M + CS + + D L Sbjct: 98 QLSNKQIQMFNEAE---DARLFNGV--GVS---MRGPGGAIAAVGAACSVKNGNLNKDIL 149 Query: 151 QLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENT 210 L+ + RL ++ V ++ + +E+EIL W+A G T ++IA L IS +T Sbjct: 150 D-AANLMSVQFYTCYWRLMEKKVTL--VHLTAKEQEILTWSAAGYTKSQIAHKLCISVHT 206 Query: 211 VNFHQKNMQKKINAPNKTQVACYAAATGLI 240 V+FH +N K+ A N T A LI Sbjct: 207 VDFHVRNCLAKLEAQNITHAVSRALNLSLI 236 >UniRef50_B9JA22 Transcriptional regulator protein n=10 Tax=Rhizobium/Agrobacterium group RepID=B9JA22_AGRRK Length = 245 Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 30/61 (49%), Positives = 39/61 (63%) Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 + RE + L WTA GKTSAEIA IL++SE+TVN + KK++ N+TQ A GL Sbjct: 184 LTDRELDCLNWTAAGKTSAEIAEILTLSEHTVNHYLNRATKKLDTVNRTQAVAKALRVGL 243 Query: 240 I 240 I Sbjct: 244 I 244 >UniRef50_B8G436 Transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8G436_CHLAD Length = 508 Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 30/67 (44%), Positives = 43/67 (64%) Query: 174 MTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 MT E S+RE+EILR A G T+ +IA+ L+IS NTV H +N+ KI ++T+ Y Sbjct: 1 MTNESPISEREREILRLVATGATNQQIAVALNISVNTVKVHLRNIFAKIGVESRTEATVY 60 Query: 234 AAATGLI 240 A TG++ Sbjct: 61 AIRTGIV 67 >UniRef50_C6XPJ3 Transcriptional regulator, LuxR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XPJ3_HIRBI Length = 248 Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 17/191 (8%) Query: 60 YTNYPEAWVSYYQAKNFLAIDPVLNP--ENFSQGH---LMWNDDLFSEAQPLWEAARAHG 114 + +P+ W +Y + + +DPV + F G+ L+ N + + E A AHG Sbjct: 58 FGEWPKVWARHYADQRYFEVDPVFESLLKGFDAGYWDELVSNLPVSQAGLKVMEDAAAHG 117 Query: 115 LRRGVTQYLMLPNRALGFLS-FSRCSARE--IPILSDELQLKMQLLVRESLMALMRLNDE 171 G ++ + N + +S + + R+ + IL D +K V E +M L R Sbjct: 118 YADGYSRLIPTLNGSYYLVSLYGKTLVRDPNVRILFDLASIK---FVHEGVMLLNRR--- 171 Query: 172 IVMTP--EMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQ 229 V TP + + +KR+ E+L+ A G+T + A L +S V H ++K++NA +Q Sbjct: 172 -VGTPLKDHDLTKRQIEVLQAKANGQTDKQTADRLGVSVKAVEGHLTKIRKQMNARTTSQ 230 Query: 230 VACYAAATGLI 240 A GLI Sbjct: 231 AIGLARGKGLI 241 >UniRef50_Q21BG2 Transcriptional regulator, LuxR family n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q21BG2_RHOPB Length = 245 Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 10/174 (5%) Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSE-----AQPLWEAARAHGLR 116 ++PEAW Y N+ DP+ W+D + A + AA + +R Sbjct: 65 HWPEAWFGQYLQDNYQDHDPIAAHARQQTRAFCWSDAPWDRSDKKTAAVMDCAAHDYDMR 124 Query: 117 RGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTP 176 RG + +SF P + M+L+ ++ LM + E Sbjct: 125 RGFCVPIFGMRGYEAAISFGGPEIDASPAAT----AAMELIAIYAMNQLMTMR-EPPARR 179 Query: 177 EMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQV 230 + S RE+E++ W A GKT+ + A IL+IS +TVN H + +K++A KTQ Sbjct: 180 QTTLSPREREVVAWAAVGKTAWDTARILAISTDTVNKHMASAMRKLDACTKTQA 233 >UniRef50_A9D9Y9 Putative transcriptional regulator protein, LuxR family n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D9Y9_9RHIZ Length = 208 Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 2/72 (2%) Query: 171 EIVMTPEM--NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKT 228 E+V++ + S+RE +I+ WT+EGKTS+EIA+IL +SE+TVN + + +K+ N+ Sbjct: 136 EVVLSLDSISGLSEREIQIVSWTSEGKTSSEIAIILGLSEHTVNSYIAAILRKLQVVNRA 195 Query: 229 QVACYAAATGLI 240 Q+ A GLI Sbjct: 196 QMVASALRNGLI 207 >UniRef50_A5P6H4 Transcriptional regulator, LuxR family protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P6H4_9SPHN Length = 217 Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 83/195 (42%), Gaps = 31/195 (15%) Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQ-GHLMWNDDLFSEAQ-----PLWEAARAHGL 115 +P+AW Y++ IDP P ++ G + ++ ++AQ E AR HG+ Sbjct: 36 GFPDAWAETYRSAEMDTIDPF--PRYVARSGRPLRLTEISAQAQSKEQKAFLEQAREHGI 93 Query: 116 RRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT 175 G+ + LG + + +++L R S+ AL + Sbjct: 94 TDGLIIPTFGIRQNLGVFAIGQVK-------------DLKVLERASVFALQAVAQAAHTQ 140 Query: 176 PEM----------NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAP 225 EM N S RE EIL W A GKT++EIA IL I TV + K + K++ Sbjct: 141 MEMLASRADGLRTNLSNRETEILHWIALGKTNSEIATILGIGGPTVATYIKRVFDKLDVK 200 Query: 226 NKTQVACYAAATGLI 240 +++ A A G+I Sbjct: 201 DRSSAAVKAIRWGII 215 >UniRef50_A8LML6 Putative transcriptional regulator n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LML6_DINSH Length = 243 Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 59/240 (24%), Positives = 101/240 (42%), Gaps = 20/240 (8%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYD---YYSLCVRHPVPFTRPKVAFYTNYPEAWV 68 T + R ET +++ + A D Y++ VP + V F +PE+W+ Sbjct: 6 TFMDGVSRAETPAQIWDAVLPFAHSFGIDKVSYHNTPAFGAVPGSETAV-FARGFPESWL 64 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAAR-------AHGLRRGVTQ 121 Y + +DP+ + W+D ++ PL GL G+ Sbjct: 65 CDYVNERLYEVDPIPAYAAHATEPFRWSD--IAKLTPLTAPETDFLKRLLQQGLGDGLAL 122 Query: 122 YLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEI-VMTPEMNF 180 + PN G++ S+ P LS ++ L + A +R + V TPE Sbjct: 123 QVFGPNMRNGYVGVGFASSD--PDLSGG---DIRELQAAAQAAHLRYCTLVPVATPEA-L 176 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + RE+E+L W A GK+++ IA IL +S +TV+ + + K+ ++T A GLI Sbjct: 177 TPREREVLGWIARGKSNSVIAEILGVSPHTVDTLVRRIYGKLEVADRTTAAIRGIGAGLI 236 >UniRef50_A5V2N0 Transcriptional regulator, LuxR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V2N0_SPHWW Length = 254 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 9/226 (3%) Query: 21 ETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAID 80 E++ ++ I QQ + +++L + R TNYP +WV + D Sbjct: 26 ESSAQLSEVIAGAIQQFGFRWFALVDDGDLYKHRSGCMMLTNYPSSWVDEVISARLYRDD 85 Query: 81 PVLNPENFSQGHLMWN--DDLFSEAQP---LWEAARAHGLRRGVTQYLMLPNRALGFLSF 135 PV S L W+ D+ + + + E RAHGL G T +P F S Sbjct: 86 PVHAASIRSPTGLCWDRIPDVIAPTRAQLSVLERGRAHGLTTGYTVPFRIPGERGAFFSI 145 Query: 136 SRCSAREIPILSDELQLKMQLLVRESLMALMRL-NDEIVMTPEMNFSKREKEILRWTAEG 194 +R R + + QLL + A L V + R+ + LR A G Sbjct: 146 ARPKDRS---FTYSEAISAQLLGGIAFEAGRALVKGRAVKAHGAPLTPRQIDCLRLIAAG 202 Query: 195 KTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 KT E+ IL +S +T++ + + +++ ++Q+ AA G + Sbjct: 203 KTEWEMGKILGLSPSTIHEYVEAARRRYGVKTRSQLVLAAARDGYV 248 >UniRef50_A9HYE4 Transcriptional regulator, LuxR-family n=2 Tax=Proteobacteria RepID=A9HYE4_BORPD Length = 71 Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 37/65 (56%) Query: 176 PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 P S RE E L W+A GKTS EIA+IL +SE TVNFH N K+ N+ A Sbjct: 2 PAKPLSNREHECLHWSAMGKTSWEIAVILGVSERTVNFHIGNACSKLGVYNRRAAVAIAL 61 Query: 236 ATGLI 240 + GL+ Sbjct: 62 SQGLL 66 >UniRef50_Q9F5D3 Riorf119 protein n=2 Tax=Agrobacterium rhizogenes RepID=Q9F5D3_AGRRH Length = 224 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 80/188 (42%), Gaps = 10/188 (5%) Query: 60 YTNYPEAWVSYYQAKNFLAIDPVLNP-----ENFSQGHLMWNDDLFSEAQPLWEAARAHG 114 + +YPE W Y ++ IDPV+ E FS W SE + + A HG Sbjct: 40 FNSYPEEWQDIYLGSHYSRIDPVITEAKRRMETFSWTADDWPARGSSELRRFRDQAIEHG 99 Query: 115 LRRGVTQYLMLPNRALGFLSF--SRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEI 172 +R G+T + + L+F S A +L + + L + L + Sbjct: 100 IRSGLTIPVEGSFGSTMMLTFASSEKKAENGKVLDGQKATRAVLAIHYRLKIIAATT--- 156 Query: 173 VMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVAC 232 ++ P+ S RE L W A+GK++ E AM+ I+ TV + ++K++A + Sbjct: 157 IVAPKRLLSPREAMCLMWAAKGKSAPETAMLTGINARTVQHYLDKAREKLDAATVPHLVA 216 Query: 233 YAAATGLI 240 A GL+ Sbjct: 217 IAKDHGLV 224 >UniRef50_Q03316 Regulatory protein rhiR n=2 Tax=Rhizobium leguminosarum bv. viciae RepID=RHIR_RHILV Length = 247 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 16/207 (7%) Query: 34 AQQLEYDYYSLCVRHPVPFTRPKVAFY-TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGH 92 +Q + Y+++ P P R F N+ W Y+ N++ DP+++ Sbjct: 36 SQYFGFSYFAIS-GIPSPIERIDSYFVLGNWSVGWFDRYRENNYVHADPIVHLSKTCDHA 94 Query: 93 LMWNDDLFSE-----AQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILS 147 +W++ L + ++ + + AR L G + L + A GF S A ++ + + Sbjct: 95 FVWSEALRDQKLDRQSRRVMDEAREFKLIDGFSVPL---HTAAGFQSIVSFGAEKVELST 151 Query: 148 -DELQLKMQLLVRESLMALMRLND---EIVMTPEMNFSKREKEILRWTAEGKTSAEIAMI 203 D L + SL+ ND +I P + + RE+EI+ W A GKT+ EIA I Sbjct: 152 CDRSALYLMAAYAHSLLRAQIGNDASRKIQALPMI--TTREREIIHWCAAGKTAIEIATI 209 Query: 204 LSISENTVNFHQKNMQKKINAPNKTQV 230 L S T+ N+Q+K+N N Q+ Sbjct: 210 LGRSHRTIQNVILNIQRKLNVVNTPQM 236 >UniRef50_B0SZK2 Transcriptional regulator, LuxR family n=4 Tax=Alphaproteobacteria RepID=B0SZK2_CAUSK Length = 257 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 18/178 (10%) Query: 72 QAKNFLAIDPVLNPENFSQGHLM-WNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRAL 130 +A LA P + QG W EA + EAA+A G+ + L + Sbjct: 76 RAPFILAARCTAEPFFYHQGRFASWRPLARLEAIEVGEAAKAFGVEAAIIAPAHLTGGVI 135 Query: 131 GFLSFSRCSA-REIPIL----SDELQ---LKMQLLVRESLMALMRLNDEIVMTPEMNFSK 182 G + ++ ++P L SDEL L++ R+ +D++ P + +K Sbjct: 136 GAVVWASAEPLADLPALYAARSDELHGAALRLVSAYRDGC------DDDV---PPVRLTK 186 Query: 183 REKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 RE + L+W A GKT A+IA I+ I+ TV FH +N K+ + Q A G I Sbjct: 187 REIQCLKWAAAGKTDADIAQIIGIAGPTVRFHVQNAALKLRVAGRAQAVHRATGLGYI 244 >UniRef50_A4U068 Signal transduction histidine kinase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U068_9PROT Length = 189 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/65 (43%), Positives = 37/65 (56%) Query: 176 PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 P + RE+E+L W A+GKT+ E + IL IS TV FH N +K+ A K Q AA Sbjct: 123 PAPALTAREREVLLWAAQGKTAWETSAILGISSKTVEFHLGNCGRKLGAATKAQTILAAA 182 Query: 236 ATGLI 240 GL+ Sbjct: 183 RRGLL 187 >UniRef50_P55407 Probable transcriptional activator protein traR n=9 Tax=Rhizobiaceae RepID=TRAR_RHISN Length = 236 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 12/193 (6%) Query: 56 KVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSE--AQPLW---EAA 110 +V + +YP W S Y ++ IDPVL + W D + + PL + A Sbjct: 48 QVRTFHSYPGPWESIYLGSDYFNIDPVLAEAKRRRDVFFWTADAWPARGSSPLRRFRDEA 107 Query: 111 RAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPI---LSDELQLKMQLLVRESLMALMR 167 +HG+R GVT + + L+F+ R++ I L + +++ ++V L + Sbjct: 108 ISHGIRCGVTIPVEGSYGSAMMLTFA-SPERKVDISGVLDPKKAVQLLMMVHYQLKIIAA 166 Query: 168 LNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNK 227 + V+ P+ S RE L W ++GKT++ A + I+ TV + + K++A + Sbjct: 167 ---KTVLNPKQMLSPREMLCLVWASKGKTASVTANLTGINARTVQHYLDKARAKLDAESV 223 Query: 228 TQVACYAAATGLI 240 Q+ A GL+ Sbjct: 224 PQLVAIAKDRGLV 236 >UniRef50_A5EUQ4 Transcriptional regulator, LuxR family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EUQ4_BRASB Length = 243 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 19/194 (9%) Query: 61 TNYPEAWVSYYQAKNFLAIDPVLN-PENFSQGHLMWNDDLFSEAQP----LWEAARAHGL 115 ++YP++W S+Y + + IDPVL P N S+ L + S P L++ A + + Sbjct: 54 SSYPKSWTSHYFREGYDNIDPVLQEPRNTSRMFLWDGREARSAKSPKERRLFDDALSFKI 113 Query: 116 RRGVTQYLMLPNRALGFLSFS-----RCSAREIPILSDELQLKMQLLVRESLMALMRLN- 169 R G+T + +P+ F +F+ R + I + + L+M L + ++ R+ Sbjct: 114 RTGLT--VRIPSSQNQFAAFTLAADDRSLGLDRFIETSQDMLEMVGLTYHAHVSAARIGR 171 Query: 170 ---DEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPN 226 D +P ++RE++ L W ++GKT +IA +L +S V FH N ++ + A Sbjct: 172 TPPDGQQGSP---LTQRERQCLAWISDGKTMQDIAELLGVSPRGVKFHLDNARRNLAALT 228 Query: 227 KTQVACYAAATGLI 240 A GL+ Sbjct: 229 LPHAVALAFRQGLL 242 >UniRef50_Q1LCE4 Two component transcriptional regulator, LuxR family n=10 Tax=Proteobacteria RepID=Q1LCE4_RALME Length = 206 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%) Query: 175 TPE-MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 TP+ + S+RE E L W+A GKTS EIA IL +S+ TV+FH ++K+ + + Sbjct: 138 TPQNVTLSEREIEALSWSARGKTSGEIATILGLSKRTVDFHIDRAREKLGVATRVEAVVR 197 Query: 234 AAATGLI 240 AA G I Sbjct: 198 AATEGFI 204 >UniRef50_C5A948 Transcriptional regulator, LuxR family protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5A948_BURGB Length = 243 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 38/61 (62%) Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 F+++E E+++W EGKT+ EI IL +SE TV FH N+ +K+ N+ Q + GL Sbjct: 183 FTRKESEVVKWVVEGKTAWEIGRILCMSERTVKFHLTNVYEKLRVTNRAQAVAKVSRLGL 242 Query: 240 I 240 I Sbjct: 243 I 243 >UniRef50_B5ZUI2 Transcriptional regulator, LuxR family n=8 Tax=Rhizobium RepID=B5ZUI2_RHILW Length = 240 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 98/233 (42%), Gaps = 22/233 (9%) Query: 17 FQRME-------TAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTR-PKVAFYTNYPEAWV 68 F R+E T EV+ ++ Q L + + V F TN+P V Sbjct: 7 FNRIEEVAAGFNTHYEVFKYMKGLTQDLGMTAFLIMTLPTVDFAEIGATKIITNWPAEMV 66 Query: 69 SYYQAKNFLAIDPVL-------NPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQ 121 YY A N + PV+ +P N+ + D + + E +G+ +G Sbjct: 67 DYYDAHNLMVDSPVIRRMLRSTSPFNYDV-EAINTDRGEGKKSTVIELFNRYGMEKGA-- 123 Query: 122 YLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFS 181 Y + + A G + S +R ++ L + L+ + L L LN++ + F+ Sbjct: 124 YFPVHDAAGGRGAMSISGSRNFSMIEMAKLLFIATLIYDRLSQLT-LNEK---HKPIEFT 179 Query: 182 KREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 + E + LR TA G+ AEIA +L ++EN VN H + KK+ +TQ A Sbjct: 180 RNELDCLRLTAGGRKGAEIAKLLDLTENAVNNHIGSAIKKLGCTTRTQAVVSA 232 >UniRef50_B2IHP8 Transcriptional regulator, LuxR family n=2 Tax=Beijerinckiaceae RepID=B2IHP8_BEII9 Length = 268 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 15/189 (7%) Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFS--EAQPLWEAARAHGL-RRG 118 Y + W+ +Y+ +N++ +DPV+N S + W S + Q + A G+ R+G Sbjct: 84 TYSQEWIEHYRERNYVNLDPVINVGARSLLPIDWAKLPRSSPKIQKFFGEATDFGVGRQG 143 Query: 119 VTQYLMLPNRALGFL-------SFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDE 171 +T + P L L + + AR ++ D + + +++ + ++ Sbjct: 144 LTIPVRGPTNGLWALFCMTTDDTQAEWQARHYELIRDMVHVAH--FIQQRAFEMHHQDEG 201 Query: 172 IVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVA 231 I + +KRE E L W+AEGKT +I++++ IS+ TV H + + K+ A N+ Sbjct: 202 IDIN---TITKREIEALSWSAEGKTLEDISVLMRISQETVKAHLDSARYKLGALNRIHAV 258 Query: 232 CYAAATGLI 240 A GLI Sbjct: 259 AKAIRAGLI 267 >UniRef50_A6F7D7 Transcriptional regulator, LuxR family n=1 Tax=Moritella sp. PE36 RepID=A6F7D7_9GAMM Length = 244 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/62 (45%), Positives = 40/62 (64%) Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 N SKRE E+L W EGK++ + ++IL+ISE TV FH N+ KK+ N++Q A G Sbjct: 181 NLSKRELEVLNWAKEGKSNWDTSLILAISERTVKFHFSNIFKKLEVVNRSQAIARAIHFG 240 Query: 239 LI 240 L+ Sbjct: 241 LV 242 >UniRef50_C8Q1R2 Transcriptional regulator, LuxR family n=4 Tax=Enterobacteriaceae RepID=C8Q1R2_9ENTR Length = 243 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 45/187 (24%), Positives = 91/187 (48%), Gaps = 10/187 (5%) Query: 59 FYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEA----QPLWEAARAHG 114 F +++P+ Y + +DPV+ H W+++L + + ++E ++H Sbjct: 46 FISDFPDEISDNYLNNKYQYVDPVIINALSRFTHFSWDENLKINSMWTVKRIFEKIKSHN 105 Query: 115 LRRGVTQYLMLPNRALGFLSF--SRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEI 172 + RG L N L L F + +I + ++ + ++Q ++ ++ L+ + E Sbjct: 106 IIRGHAFVLHENNNNLAMLLFYIDKFLTSDIDDVFNKNRDELQGVLIDTHEMLLSVYSEG 165 Query: 173 VMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVAC 232 E FS RE EIL W ++G T +++A +L+I+ +T+ FH + KK+ N A Sbjct: 166 EEVKEDVFSARESEILYWCSKGYTYSQVAEMLNITVSTIKFHMGKVVKKMGVKN----AK 221 Query: 233 YAAATGL 239 +A + G+ Sbjct: 222 HAISLGI 228 >UniRef50_B0ZTC2 Transcriptional regulator n=4 Tax=Mesorhizobium RepID=B0ZTC2_9RHIZ Length = 243 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 16/188 (8%) Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLR 116 ++P W+ Y A+N++ DPV++ Q W + + + A A LR Sbjct: 62 DWPVEWLERYVARNYVDHDPVVSHMKQLQAPFQWREAAQGISFDKSSDEVMGDAGAFKLR 121 Query: 117 RGVTQYLMLPNRALGFLSFS----RCSAREIPILSDELQLKMQLLVRESLMALMRLNDEI 172 G+ L+ + + +S + S E ++S + ++ MA + D I Sbjct: 122 DGLAFPLITLDGQIVMVSLGGEAVQLSGAEFGLVSLVSTYAVGRAMQIHTMATSTI-DHI 180 Query: 173 VMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVAC 232 +TP RE+E L+W A GK+ EI+ IL ISE+T H N + K+ A N+ Q Sbjct: 181 ELTP------RERECLQWAAVGKSEWEISQILGISEHTSEKHLLNAKSKLGAVNRVQAVA 234 Query: 233 YAAATGLI 240 A G I Sbjct: 235 EAIRRGYI 242 >UniRef50_Q28MF2 Transcriptional regulator, LuxR family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28MF2_JANSC Length = 243 Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 58/220 (26%), Positives = 92/220 (41%), Gaps = 20/220 (9%) Query: 34 AQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLN--PENFSQG 91 A L + +L + P R F TN P + Y F+ DP L+ + + Sbjct: 29 ADDLGMPFCTLTMARRAPDLRSS-QFITNLPAPFQDTYCEGGFINDDPFLSLICRDMTAA 87 Query: 92 HLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRAL------GFLSFSRCSAREIPI 145 M + D EA A GV L +P R G++ AR++ Sbjct: 88 GFMTDPDDLPEADQRQGAFLDLTRSFGVGTALCIPVRTTRQSEFGGWVIGGDLRARDVAD 147 Query: 146 LSDELQLKMQLLVRESLMALMRLNDEIVMTPEMN-----FSKREKEILRWTAEGKTSAEI 200 + +++QL L+A RL+ V+T + N S RE+E L+W + G +I Sbjct: 148 GREIAAMQLQL---AGLIAFERLS---VLTRQANHAHRRLSPRERECLQWLSAGLRVTQI 201 Query: 201 AMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 A L ISE+ V+ + KN ++K A + Q +A +G I Sbjct: 202 AHRLDISESAVHLYIKNARRKFGARTREQAVAHAIVSGEI 241 >UniRef50_A4XFC7 Regulatory protein, LuxR n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=A4XFC7_NOVAD Length = 248 Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 36/62 (58%) Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 ++RE + LRW A GKT EI +IL +S +TV FH +N +K+ A + Q AA G Sbjct: 182 KLTRREVQCLRWAAAGKTDGEIGIILDLSHSTVRFHLRNAAEKLGATGRAQSIQLAAGLG 241 Query: 239 LI 240 + Sbjct: 242 YV 243 >UniRef50_A3S0X6 Putative uncharacterized protein n=8 Tax=Ralstonia solanacearum RepID=A3S0X6_RALSO Length = 263 Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 46/148 (31%), Positives = 70/148 (47%), Gaps = 16/148 (10%) Query: 100 FSEAQPLWEAAR-------AHGLRRGVTQYLMLPNRALG-FLSFSRCSAREIPILSDELQ 151 F A P+ E R A+ LR V + +G + SF R + P L+ L+ Sbjct: 104 FDAAAPVAEIDRGWLAKFIAYDLRNAVADGVYDEGHCIGTYFSFHRLVSVNEPFLASVLR 163 Query: 152 LKMQLLVRESLMALMRL-----NDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSI 206 +L R + A+ N VM+ S+RE+++ W +GK++AEIA++ SI Sbjct: 164 DLTPVLHRTLMRAVADTEKTWHNALRVMSL---LSERERQVAAWIGKGKSNAEIALLASI 220 Query: 207 SENTVNFHQKNMQKKINAPNKTQVACYA 234 SENTV H K++ K N+ VA A Sbjct: 221 SENTVKQHLKHIMDKTGCANRVGVAVLA 248 >UniRef50_C1SGH5 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGH5_9BACT Length = 193 Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 38/61 (62%) Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 + RE EIL+ A GKTS EI +L IS+NTV+ H+ M +K+N N + YA +GL Sbjct: 133 LTSRECEILKLIASGKTSREIGEMLCISKNTVDTHRNKMLQKLNLANSASLVHYAFVSGL 192 Query: 240 I 240 + Sbjct: 193 V 193 >UniRef50_C8SNG6 Transcriptional regulator, LuxR family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SNG6_9RHIZ Length = 240 Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 22/213 (10%) Query: 29 EIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYT---NYPEAWVSYYQAKNFLAIDPV--- 82 ++ L + L +++ L VP K+A +PE W Y A+D V Sbjct: 25 DVLLTVRNLGFEHLILS---GVPLGGQKLAPMVELNGWPEGWFKRYVEAEHAAVDGVCIY 81 Query: 83 ----LNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRC 138 L P ++ W+D S + + A G+ G ++ + LSF+ Sbjct: 82 SAKTLKPFLWADVPAKWSDTKGS--RRVAGEATEFGISSGFAVPMLSVHHWQSVLSFA-- 137 Query: 139 SAREIPILSDELQLKMQLLVRESLMALMRL--NDEIVMTPEMNFSKREKEILRWTAEGKT 196 S+ ++ LS ++++ + + MA+ L DE+ E ++REKE+L W A GKT Sbjct: 138 SSAKVCALSPREEVQLVTMAVYAGMAIQALSHGDEV---EEGLLTEREKEVLLWAAAGKT 194 Query: 197 SAEIAMILSISENTVNFHQKNMQKKINAPNKTQ 229 S+E + IL ++E TV +H ++ TQ Sbjct: 195 SSETSQILGLAERTVKWHATRAREAFGVATTTQ 227 >UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexaceae RepID=A9WKI8_CHLAA Length = 209 Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 41/62 (66%) Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 ++RE+E+L+ AEG T+AEIA L++SE TV H ++ +K+ ++TQ A YA G Sbjct: 147 TLTEREREVLKLVAEGLTNAEIASRLTVSEETVKTHVASILRKLGLAHRTQAAIYALRHG 206 Query: 239 LI 240 L+ Sbjct: 207 LV 208 >UniRef50_A6U6L7 Regulatory protein LuxR n=3 Tax=Rhizobiaceae RepID=A6U6L7_SINMW Length = 246 Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 39/62 (62%) Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 + S+RE E LRW A GKT+ E+A I+++SE TVN + +K+++ N+ Q A G Sbjct: 184 SLSRREIECLRWAAAGKTTVEMARIMALSEYTVNHYLNRATRKLDSVNRVQTVAKAIRAG 243 Query: 239 LI 240 LI Sbjct: 244 LI 245 >UniRef50_A4U2G3 Transcriptional activator protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U2G3_9PROT Length = 237 Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 9/186 (4%) Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWN------DDLFSEAQPLWEAARAHG 114 YP W+ +Y A + IDPV+ S W + E + L+ A +G Sbjct: 53 ATYPTEWMEHYFANRYQFIDPVVLEAQRSHLPFAWRFLLNRPGAMSPEQKLLFAEAAKYG 112 Query: 115 LRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVM 174 +R G T N + +SF+ S E+ ++ +Q +++LL A+ RL + V Sbjct: 113 IRDGFTIPFHSDNGCIAAMSFAFRSRAEMEHFAN-MQPRLKLLALYYHTAIERLLE--VE 169 Query: 175 TPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 P+ S E++ L + A+G++ EI+ +L E+ V ++ + K+ A Q A Sbjct: 170 IPDDELSAMERQCLTFLADGRSLWEISGLLHRPESDVTSSLRSARDKLGAATTAQAVHKA 229 Query: 235 AATGLI 240 A GLI Sbjct: 230 IAEGLI 235 >UniRef50_Q1GYL3 Transcriptional regulator, LuxR family n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GYL3_METFK Length = 272 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 8/95 (8%) Query: 154 MQLLVRESLMALMRLNDEI-----VMTPEMN---FSKREKEILRWTAEGKTSAEIAMILS 205 ++LLV LMR++D + M +N + REKEIL+W GK++ EIA IL Sbjct: 176 LELLVPYLHSVLMRVSDGVFNFGDAMGEGVNAGIITPREKEILQWVHTGKSNWEIATILE 235 Query: 206 ISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 IS TV H +N+ +K++ N++ A A GLI Sbjct: 236 ISPLTVKNHMQNILRKLDVQNRSHAAAKAYRLGLI 270 >UniRef50_Q4ZVS2 Regulatory protein, LuxR n=2 Tax=Pseudomonas syringae RepID=Q4ZVS2_PSEU2 Length = 238 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 62/120 (51%), Gaps = 9/120 (7%) Query: 118 GVTQYLMLPNRALGFLSFSRCSAREIPILSDE----LQLKMQLLVRESLMALMRLNDEIV 173 G+T + + +A L F+ +E S + L +++ LVRE L L + Sbjct: 114 GMTAFYLGEEKAFSLLRFAN---KETGTGSTQGEYSLAAEVKSLVREFHHKLTGLVMGVN 170 Query: 174 MTPE-MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVAC 232 + E + REKE+ WTA GKT EIA+IL+IS+ TV+FH N+ K+ K Q AC Sbjct: 171 ESDENFTITDREKEVYIWTAIGKTCNEIAVILNISKRTVDFHISNVISKLGVRTKLQ-AC 229 >UniRef50_D2TJP9 Quorum sensing transcriptional regulator CroR n=24 Tax=Enterobacteriaceae RepID=D2TJP9_CITRO Length = 230 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 4/60 (6%) Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 S RE++IL+W + GKT AE+++ILSI+E TV FH N KK+ N A +A G+ Sbjct: 168 LSPRERQILKWVSAGKTYAEVSLILSITERTVKFHMSNAMKKLGVNN----ARHAVKLGM 223 >UniRef50_C6P1V2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1V2_9PROT Length = 690 Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 12/186 (6%) Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQP--LWEAARAHGLRRG 118 T YP AW+ Y + + +IDP + + +W+ + F A ++E AR HG+ G Sbjct: 54 TTYPAAWIEKYVSAGYASIDPAVRHSMERRTPYIWSAEAFESAGAGLMFEDARHHGIVSG 113 Query: 119 VTQYLM-LPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRE---SLMALMRLNDEIVM 174 ++ L + ++G + + C + L D ++ + L + S +A+ L+DE Sbjct: 114 MSVPLFDSASNSIGGMGLA-CRSETCRGLEDIGRVVLFALYFQEAYSRIAVPFLHDE--- 169 Query: 175 TPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 + S++E L W ++G A+IA L++ E V + + K++A + Q +A Sbjct: 170 --DGVLSRQEGACLGWISDGLDVAQIAQRLALPEAEVQQLLEQVLHKLDASSLPQAVAHA 227 Query: 235 AATGLI 240 A GL+ Sbjct: 228 FAGGLL 233 >UniRef50_C0R2A4 DNA-binding response regulator, LuxR family protein n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0R2A4_BRAHW Length = 317 Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 24/55 (43%), Positives = 39/55 (70%) Query: 177 EMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVA 231 ++N ++REKEIL + +GKT+ E+++ILSIS NTVN H N+ +K N+ ++ Sbjct: 257 DINLTRREKEILSYLLDGKTNKEVSLILSISLNTVNNHVANIYEKSGVKNRVELV 311 >UniRef50_Q8KW81 RC109 n=1 Tax=Ruegeria sp. PR1b RepID=Q8KW81_9RHOB Length = 258 Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 64/240 (26%), Positives = 103/240 (42%), Gaps = 26/240 (10%) Query: 16 RFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVA----FYTNYPEAWVSYY 71 +F R + +EV + A L DY V + P ++ K T Y + W +Y Sbjct: 25 KFSRFSSLKEVS---DFLASGLG-DYGISDVTYYTPKSKVKGGGAGRLITTYSQDWQDHY 80 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGLR-RGVTQYLMLPNR 128 ++ DPV+ S + W+ D + + ++ AR G+ RGV ++P R Sbjct: 81 FEMSYQDKDPVIEMGQQSFCPIDWSILKDRCGDTKKMFGEAREFGVSDRGV----VIPMR 136 Query: 129 A-LGFLSF----SRCSARE-IPILSDELQ--LKMQLLVRESLMALMRLNDEIVMTPEMNF 180 LG ++ S E + LS + + S+++L + E Sbjct: 137 GHLGEITLISMTSDLGGSEWVKYLSAHKSEFVNFAFCLHGSILSL---SANTGGKEEPRL 193 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + REK++L+W A GKTS E AMIL +SE T+ + K+ A K C A + GLI Sbjct: 194 TVREKQVLQWAAFGKTSWETAMILELSERTIETYIGKAVAKLEASTKAHAVCKALSLGLI 253 >UniRef50_UPI0001746371 methyl-accepting chemotaxis sensory transducer n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746371 Length = 331 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 3/78 (3%) Query: 160 ESLMALMRLNDEIVMTPEM---NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQK 216 ES M+L+ + +++ +P+ + REKE+L W EGK++ EI +IL IS +TV H + Sbjct: 245 ESGMSLLIVEEDLDGSPQAPDETLTAREKEVLEWMQEGKSNPEIGVILGISTHTVKRHVE 304 Query: 217 NMQKKINAPNKTQVACYA 234 + K+ N+ A Y Sbjct: 305 RVLAKLGVENRVAAALYG 322 >UniRef50_Q2NWB5 Transcriptional activator protein n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NWB5_SODGM Length = 245 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 9/180 (5%) Query: 56 KVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQP----LWEAAR 111 K Y+NYP+ WV Y DPVL + W + F + + ++ + Sbjct: 48 KPVIYSNYPKEWVEKYMKNKLYKQDPVLLVASQKIMSFPWQKNYFKKTKHQKSNIFAQSS 107 Query: 112 AHGLRRGVTQYLMLPNRALGFLSFSRCSARE-----IPILSDELQLKMQLLVRESLMALM 166 + + RG T L L LS S + I D L L + L Sbjct: 108 EYNITRGYTFPLHDHENNLAMLSLYTESDPDQLMKCISDHEDRLYLLFLSIHNRFLAEKA 167 Query: 167 RLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPN 226 + + E + RE E L W + GKT EIA+I+ I+E+TV FH N+ K++ N Sbjct: 168 QQTNTSNTKIEKRLTSREIEALHWASIGKTYREIAIIMGITESTVKFHIGNLIVKLDVIN 227 >UniRef50_B7T9X4 LuxR family transcriptional regulator n=1 Tax=uncultured proteobacterium RepID=B7T9X4_9PROT Length = 277 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 85/209 (40%), Gaps = 20/209 (9%) Query: 45 CVRHPVPFTRPKVA-FYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMW-----NDD 98 C H P P+ A +YP+ W + IDPV + S W ND+ Sbjct: 41 CCSHVDPLKPPRRAVMLHSYPKEWAQLFSELELFDIDPVFLHASRSLVPFFWDTEAFNDE 100 Query: 99 LFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLV 158 L Q L+ A +GL RG T +P ++ R S +P D L+ Sbjct: 101 LSPPQQELFNEAGRYGLTRGYT----VPIHSVDAPRDFRASCSVVP---DSESLEPAAYQ 153 Query: 159 RESLMALMRLN----DEIVMTP---EMNFSKREKEILRWTAEGKTSAEIAMILSISENTV 211 LMA + D P + S+RE++ L A+GK+ + IL +SE TV Sbjct: 154 AVQLMAFYLYDTASKDAQQKDPPPVQQPLSRRERQCLELAAQGKSDWVSSRILGLSERTV 213 Query: 212 NFHQKNMQKKINAPNKTQVACYAAATGLI 240 + H +N ++++ + Q +A A I Sbjct: 214 HNHVENAKRRLQVATRMQAVMHALAGQQI 242 >UniRef50_Q2RSB6 Transcriptional regulator, LuxR family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RSB6_RHORT Length = 239 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 51/215 (23%), Positives = 85/215 (39%), Gaps = 27/215 (12%) Query: 39 YDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDD 98 YDY + H P + N P + + + IDPV + +W+ + Sbjct: 29 YDYSPVPRAHDGTLITPTILETRNLPVDMAEIWCKQGYYQIDPVQDAALLVSAPFVWSHE 88 Query: 99 ----------LFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSD 148 L +E +P+ + R GL RGVT + AL +F+ + P + Sbjct: 89 GDQSDVMARVLRAEHRPVLDYLRHRGLTRGVTVPIRCGEGALA--TFTAIAPSGAPFPPE 146 Query: 149 ELQLKMQLLVRESLMALMRLNDEIV--------MTPEMNFSKREKEILRWTAEGKTSAEI 200 + + LL + +D + + P ++ ++RE+E L EG T+ EI Sbjct: 147 DRLSSLGLLGQS-------FHDRVYPGFPAASHLCPVVHLTRRERECLALCGEGLTAKEI 199 Query: 201 AMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 A + S TV FH +K+ A N+ Q AA Sbjct: 200 AYRIDRSVPTVVFHLSAATRKLGARNRFQAIARAA 234 >UniRef50_A7NFQ1 Transcriptional regulator, LuxR family n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NFQ1_ROSCS Length = 454 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/61 (42%), Positives = 39/61 (63%) Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 S+RE+EILR A G T+ +IA L+IS NTV H +N+ KI ++T+ YA +G+ Sbjct: 9 LSEREREILRLVATGATNQQIAAQLNISANTVKVHLRNIFGKIGVASRTEATMYAVRSGI 68 Query: 240 I 240 + Sbjct: 69 V 69 >UniRef50_C5ADX8 Acylhomoserine lactone dependent transcriptional activator n=1 Tax=Burkholderia glumae BGR1 RepID=C5ADX8_BURGB Length = 241 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 16/191 (8%) Query: 59 FYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQP----LWEAARAHG 114 F ++YP Y+ + +DPV+ S W + + P R G Sbjct: 51 FLSSYPIRLQQEYRRRALHRVDPVVLHAIQSVAPFSWAEAFRQQRVPDPSEFDALRREFG 110 Query: 115 LRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVM 174 L G + P + +G LSF R E + +++ + +AL+ + I Sbjct: 111 LHDGYVFTVHDPYQYVGMLSFFNRGGRP------EFRAEIERVKGAMQLALVLFHSRINA 164 Query: 175 TPE------MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKT 228 P + + RE+ +L+W A GK+ +EIA I I E TV +H N+ +K++ Sbjct: 165 KPPDSRHRVESLTLRERTVLKWAAMGKSYSEIADICGIRERTVKYHMANVVQKLDVSTAK 224 Query: 229 QVACYAAATGL 239 Q A+ GL Sbjct: 225 QAVIVASRLGL 235 >UniRef50_D1C6S1 Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S1_SPHTD Length = 223 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/68 (42%), Positives = 40/68 (58%) Query: 173 VMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVAC 232 ++ P+ S RE E+L A ++ EIA LSISE+TV H KN+ K+ ++ Q A Sbjct: 148 ILEPDGGLSPREVEVLELVALRLSNKEIAARLSISEHTVKNHLKNILAKLQLSSRRQAAA 207 Query: 233 YAAATGLI 240 YA A GLI Sbjct: 208 YAVAHGLI 215 >UniRef50_D2M390 Transcriptional regulator, LuxR family n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2M390_RHOPA Length = 218 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 22/191 (11%) Query: 61 TNYPEAWVSYYQAKNFLAIDPVL-----NPENFSQGHLMWNDDLFSEAQP-LWEAARAHG 114 + YP+ W S+Y ++ IDPV+ + E F G + + S AQ L + A +G Sbjct: 30 STYPKEWTSHYLRSHYERIDPVIMQALRDTEPFRWG-IGSTERYLSPAQKRLLDEASQYG 88 Query: 115 LRRGVTQYLM---LPNRALGFLSFSRCSAREIPILSDELQLKMQLL-----VRESLMALM 166 +R G T + P A+ F R + E + S+ L++ + VR L + + Sbjct: 89 IRLGFTVPIHDGHGPVAAVTFAGNQREAQFERFVTSNPRMLQLMAMFFHSHVRRKLASDL 148 Query: 167 RLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPN 226 R++ + S RE E L W A GK++ +I IL IS +T + N + K+ Sbjct: 149 RVDGAAL-------SAREFECLEWAARGKSAWDIGRILGISHHTAISYLNNAKAKLGVRT 201 Query: 227 KTQVACYAAAT 237 Q A AA Sbjct: 202 VVQAALRVAAA 212 >UniRef50_C5CQX2 Two component transcriptional regulator, LuxR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CQX2_VARPS Length = 262 Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 37/62 (59%) Query: 177 EMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAA 236 E + RE+E+LR+ A G S EI++ L IS TVN H KN+ KK++ ++ Q A Sbjct: 199 EATLTAREREVLRFVARGCVSKEISVRLGISGQTVNAHIKNIYKKLHVHSRAQAVSLATH 258 Query: 237 TG 238 TG Sbjct: 259 TG 260 >UniRef50_C6B8S2 Transcriptional regulator, LuxR family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6B8S2_RHILS Length = 236 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 8/186 (4%) Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDL-----FSEAQPLWEAARAHGL 115 + Y + W S Y +++++AIDPV+ + W+ D + ++ A G+ Sbjct: 53 STYQKEWQSLYFSRSYMAIDPVVTAAKRLRRAFRWSADFERRRADDGIKEFYDTAAEFGI 112 Query: 116 RRGVTQYLMLPNRALGFLSFSRCSAREIPILS-DELQLKMQLLVRESLMALMRLNDEIVM 174 R G++ + L+ + SAR + D+L + A ++ Sbjct: 113 RSGLSIPIWTGFGQFAILTLA--SARHLETSGPDDLDTVGAAGAAALIHARLQGTTTPTQ 170 Query: 175 TPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 P+ FS RE LRW AEG IA + ++ +TV + ++ K+ + Q A Sbjct: 171 RPDFIFSDREALCLRWAAEGLPMHSIADVTGLTYHTVRWDLDRVKAKLGVYTQKQAVAVA 230 Query: 235 AATGLI 240 + GLI Sbjct: 231 SRFGLI 236 >UniRef50_A5UQJ6 Response regulator receiver protein n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UQJ6_ROSS1 Length = 471 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 38/61 (62%) Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 S+RE+EILR A G T+ +IA L+IS NTV H +N+ KI ++T+ YA GL Sbjct: 9 LSEREREILRLVATGATNQQIAAQLNISANTVKVHLRNIFGKIGVASRTEATMYAVRNGL 68 Query: 240 I 240 + Sbjct: 69 L 69 >UniRef50_A6ULF7 Response regulator receiver protein n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6ULF7_SINMW Length = 243 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 56/193 (29%), Positives = 82/193 (42%), Gaps = 22/193 (11%) Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGLR-R 117 T YPE W Y K F IDPV++ + + W+ D +A L++ AR + + Sbjct: 58 TTYPERWTEKYVGKCFFEIDPVIDVIRWGFLPVDWSSLDRRSEQAHRLFKEARLYDIGPH 117 Query: 118 GVTQYLMLPNRALGFLS---------FSRCSAREIPILSDELQLKMQLLVRESLMAL-MR 167 G+T + P LS +SR A I ELQ+ L L A +R Sbjct: 118 GLTIPIRGPKGERCLLSVTSNLPGRHWSRLRASSI----HELQILSHYLHETVLSASGLR 173 Query: 168 LNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNK 227 D N S+RE + + A G+ S +IA L ISEN V + ++ + K+ A Sbjct: 174 GTDRY-----RNLSRRESQCFQLLATGRISKQIAADLGISENAVKLYLRSARMKLGAATS 228 Query: 228 TQVACYAAATGLI 240 Q A+ LI Sbjct: 229 HQAVARASFLELI 241 >UniRef50_B9QZV4 Sigma-70, region 4 family n=3 Tax=Rhodobacteraceae RepID=B9QZV4_9RHOB Length = 236 Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/61 (45%), Positives = 37/61 (60%) Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 S RE+++L TA GKT+ EIA +L IS+ TV+ H +N K+NA NKT A G Sbjct: 174 LSTRERKVLELTAYGKTAGEIADVLDISQRTVHAHLQNASVKLNASNKTHTVVEALRYGQ 233 Query: 240 I 240 I Sbjct: 234 I 234 >UniRef50_Q4ZNM6 Regulatory protein, LuxR n=9 Tax=Gammaproteobacteria RepID=Q4ZNM6_PSEU2 Length = 254 Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 59/244 (24%), Positives = 99/244 (40%), Gaps = 16/244 (6%) Query: 4 KDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNY 63 DF S ++ Q+M+ A + ++ A + YDY + V H P + N Sbjct: 6 SDFNSRLQSASTLDQQMDCALLLASDLGFDA--VIYDYSPVPVSHDGALITPSLLSLRNT 63 Query: 64 PEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEA----------QPLWEAARAH 113 P W + + ++ + IDPV + S +W+ +E +P+ Sbjct: 64 PADWHALWCSQGYYQIDPVQHLAVASVSPFVWSYLPRAETVLKTFITDMHKPVVRYLHDS 123 Query: 114 GLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQ--LKMQLLVRE-SLMALMRLND 170 + GVT + +P L+ C+ L D Q + LL +A + Sbjct: 124 HMTCGVTVPIHMPKGGFATLT-GLCTDGSDVALEDARQSLAEFGLLAHAFQEVAYPLFDQ 182 Query: 171 EIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQV 230 +I + + RE+E L W+AEG T+ EIA L+ S TV H + +K+ A N+ Q Sbjct: 183 KIRSCNAIRLTPRERECLSWSAEGLTAREIADQLNRSVATVTLHLNSAMQKLGAKNRVQA 242 Query: 231 ACYA 234 A Sbjct: 243 VVRA 246 >UniRef50_A2SE70 ATP-dependent transcriptional regulator-like protein protein n=2 Tax=Methylibium petroleiphilum PM1 RepID=A2SE70_METPP Length = 933 Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 29/61 (47%), Positives = 38/61 (62%) Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 S+REKE+LR+ +G T+ EIA L +SENTV FH KN+ K+ N+ Q A A L Sbjct: 872 LSEREKEMLRFLLDGTTNREIAGRLFVSENTVKFHLKNIYSKLGVGNRLQAINTARALRL 931 Query: 240 I 240 I Sbjct: 932 I 932 >UniRef50_A5PE73 Transcriptional regulator, LuxR family protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PE73_9SPHN Length = 226 Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 14/187 (7%) Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRR---G 118 YPE ++ YQ + IDP P + ++ ++ L A + R G Sbjct: 44 GYPEKFIETYQREKLYLIDPF--PAHVTRHKSTLRISEIAQQAKLSRAETDYIDRMKKMG 101 Query: 119 VTQYLMLPNRA--LGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTP 176 +T L++P L + F + ++ ++ + ++ MA RL DE+ Sbjct: 102 ITDGLIIPTFGMDLRIVKFVLGQVTDFSVIENDNLFEFTATLQ---MAHRRL-DELARQD 157 Query: 177 E---MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 E +RE EIL W A+GKT+AEIA IL ++ TV H M +K++ ++ +A Sbjct: 158 EPIRRRLPRREVEILHWIAKGKTNAEIAAILGVAAPTVATHIARMFQKLDVNDRAALAVK 217 Query: 234 AAATGLI 240 G+I Sbjct: 218 GFRYGII 224 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 28/65 (43%), Positives = 39/65 (60%) Query: 176 PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 PE + RE+EIL+ AEG +S EIA L IS TV H+ N+ K+ ++ ++ YA Sbjct: 178 PETPLTPREEEILKLVAEGHSSREIADTLFISVKTVERHRANILAKLGMKDRLELTRYAI 237 Query: 236 ATGLI 240 TGLI Sbjct: 238 RTGLI 242 >UniRef50_A0L9F1 Two component transcriptional regulator, LuxR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9F1_MAGSM Length = 206 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 5/84 (5%) Query: 157 LVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQK 216 +V E + L RL+D V S REKE++R A+G+T+ EIA L IS TV+ H+ Sbjct: 128 VVAEKVNELERLDDLPV-----QLSPREKEVVRLVADGQTNKEIARSLGISPKTVDTHRT 182 Query: 217 NMQKKINAPNKTQVACYAAATGLI 240 + +K+N V YA GL+ Sbjct: 183 RLMRKLNLHTTADVVRYAMRMGLV 206 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 28/67 (41%), Positives = 40/67 (59%) Query: 174 MTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 + P + RE+E+L A+G T AEIA L IS TV H+ NM +K++ N+TQ+ Y Sbjct: 147 LDPYETLTIREREVLHLVAQGHTCAEIAERLFISPRTVEVHRANMMRKLDLRNQTQLLRY 206 Query: 234 AAATGLI 240 A G+I Sbjct: 207 ALQRGII 213 >UniRef50_Q483F6 Transcriptional regulator, LuxR family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q483F6_COLP3 Length = 269 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 40/63 (63%) Query: 178 MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAAT 237 + + REK+ L W+A+GKT+ EIA IL + T+ + KN+ K++NA +KTQ A Sbjct: 195 VKLTAREKDCLYWSAQGKTANEIADILGLKTETIRKYIKNVMKRLNARSKTQAVVKAIEF 254 Query: 238 GLI 240 GL+ Sbjct: 255 GLL 257 >UniRef50_Q1NBZ0 Transcriptional regulator, LuxR family protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NBZ0_9SPHN Length = 248 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 15/189 (7%) Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGL 115 +YP+ WV +QA+ A DP+ + + W+ L + + + A GL Sbjct: 58 VDYPQDWVERFQARRLYASDPIHRASHRTNVGFAWSAVQSIISLTAADRSILAEAYEAGL 117 Query: 116 RRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVR----ESLMALMRLNDE 171 G T +P G SF+ + + D QL LV E+ + R++ Sbjct: 118 GDGFTVPAHIPGELNGSCSFAMAAGEML----DHRQLPFVQLVGSFAFEAARKISRIHAP 173 Query: 172 IVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVA 231 P + ++R+ E + A GKT EI+ IL I + TV H K+ + + +T +A Sbjct: 174 QSECPSL--TERQAECVALVARGKTDWEISQILGIGQETVIQHVKDARDRYGVTKRTLLA 231 Query: 232 CYAAATGLI 240 A G I Sbjct: 232 IRALFEGQI 240 >UniRef50_Q1NJX6 Regulatory protein, LuxR:Response regulator receiver n=3 Tax=delta proteobacterium MLMS-1 RepID=Q1NJX6_9DELT Length = 218 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 35/60 (58%) Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 + RE+EIL W +EGK++ EI +I ISENTV H K + K N+ +A A +G Sbjct: 154 GLTPREREILHWLSEGKSNHEIGVITDISENTVKSHVKKLMSKFKVNNRVLLAKVAVESG 213 >UniRef50_B9JSF3 Transcriptional regulator LuxR family n=5 Tax=Rhizobium/Agrobacterium group RepID=B9JSF3_AGRVS Length = 230 Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 15/188 (7%) Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFS-EAQP-LWEAARAHGLRRG 118 TN+P ++S Y + L+ P+ N + ++++ + + E P E A LR G Sbjct: 49 TNWPADFLSEYDMASLLSSSPMFNRLRNTSIPVVFDVHVVARERDPKTVELATDLFLRFG 108 Query: 119 VTQYLMLP------NRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEI 172 + + P NR + + C E+P S + +Q L L + + Sbjct: 109 MPRGACFPVHDAHGNRG----AVNICG--EMPAFSFVDMVLLQYLAGHVFNRLAEIRELD 162 Query: 173 VMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVAC 232 E ++RE E L WTA GKTS EIA I+ +SE+T+N + +K++ N+TQ Sbjct: 163 ARVTE-TLTEREIECLTWTAAGKTSVEIAEIMGLSEHTINHYLNRATRKLDTVNRTQAVA 221 Query: 233 YAAATGLI 240 A LI Sbjct: 222 KALRLSLI 229 >UniRef50_D1CI66 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1CI66_THET1 Length = 218 Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 14/138 (10%) Query: 104 QPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLM 163 + L+EA ++ G Y+ R+ F ++R P + L K L+RE Sbjct: 86 EDLFEAVKS-----GALGYMFKDVRSDQFFELLEAASRGEPAFTPGLARK---LLREMSK 137 Query: 164 ALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTS-AEIAMILSISENTVNFHQKNMQKKI 222 R E PE+ ++RE+EIL +G TS E+A L +SENTV +H +N+ K+ Sbjct: 138 PAGRAERE----PEV-LTEREQEILELLVQGVTSNKELAERLILSENTVKYHLRNILDKL 192 Query: 223 NAPNKTQVACYAAATGLI 240 + N+TQV YA GL+ Sbjct: 193 HLQNRTQVVAYALQHGLV 210 >UniRef50_B3DZX3 Transcriptional regulator LuxR family n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DZX3_METI4 Length = 251 Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 4/59 (6%) Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 + RE EIL+W +GKT+ EI+ IL ISE TV FH KN+ K++ N+ C A AT Sbjct: 189 LTARELEILKWIMDGKTNWEISCILKISEATVKFHLKNIFLKLDVQNR----CQAVATA 243 >UniRef50_UPI0001926D44 PREDICTED: similar to predicted protein n=1 Tax=Hydra magnipapillata RepID=UPI0001926D44 Length = 202 Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 40/67 (59%) Query: 168 LNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNK 227 ++D + E+ + E IL+ EG TS EIA+ L+ISE TV H++N++ K+ N Sbjct: 123 VDDSVTEATEIKLTNSETTILQLVGEGLTSREIALKLNISEGTVRKHRENLRSKLGIRNS 182 Query: 228 TQVACYA 234 ++A YA Sbjct: 183 AEMAAYA 189 >UniRef50_C9YDQ4 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YDQ4_9BURK Length = 222 Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 41/70 (58%) Query: 168 LNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNK 227 ++D + E+ + E IL+ EG TS EIA+ L+ISE TV H++N++ K+ N Sbjct: 143 VDDSVTEATEIKLTNSETTILQLVGEGLTSREIALKLNISEGTVRKHRENLRSKLGIRNS 202 Query: 228 TQVACYAAAT 237 ++A YA T Sbjct: 203 AEMAAYAIRT 212 >UniRef50_B4RHX3 Transcriptional regulator, LuxR family n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RHX3_PHEZH Length = 252 Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 13/178 (7%) Query: 66 AWVSYYQAKNFLAIDPVLNPENFSQGHLMWND------DLFSEAQPLWEAARAHGLRRGV 119 AW ++Y+A+ A DP++ S L W+D L + + E AR+ GL G Sbjct: 68 AWQAHYEAQGHAARDPIVREMLRSTEPLFWSDLPARRGALKPDEARVMEEARSFGLNEG- 126 Query: 120 TQYLMLP-NRALGFLSFSRCSAREIPILSDELQLKMQLLV--RESLMALMRLNDEIVMTP 176 LM P + G +S + + + + + LL SL +R ++ Sbjct: 127 ---LMTPLHHVDGSVSAVLMMGERLASDAPDTRAALHLLSIYYGSLARKLRQRNDGGEPQ 183 Query: 177 EMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 + S R+ E LRW EGK+S I ILS+S TV+ H + +K+ + Q A Sbjct: 184 KAKLSARQIECLRWAREGKSSYVIGQILSLSARTVDEHLASACRKLGVHTRMQAVAQA 241 >UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=uncultured bacterium BLR5 RepID=C0INV4_9BACT Length = 215 Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 38/64 (59%) Query: 177 EMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAA 236 E N + RE E+L+ +EG ++ E+ LSISE TV H KN+ K+ A ++TQ A Sbjct: 149 EENLTSRETEVLQLISEGNSNKEVGNRLSISEETVKGHVKNILGKLGANDRTQAVSIAVR 208 Query: 237 TGLI 240 G+I Sbjct: 209 RGII 212 >UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG8_SYMTH Length = 197 Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 28/61 (45%), Positives = 38/61 (62%) Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 + RE+EIL AEG T+AEIA L ISE TV H+ NM K+ ++T++ YA GL Sbjct: 135 LTPREREILVLIAEGLTNAEIARRLYISEKTVQTHRSNMLDKLGIHDRTELVRYAIRQGL 194 Query: 240 I 240 + Sbjct: 195 V 195 >UniRef50_Q1MLG3 Regulator of flagellar and motility genes, also regulates rem n=16 Tax=Rhizobiaceae RepID=Q1MLG3_RHIL3 Length = 262 Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 37/64 (57%) Query: 177 EMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAA 236 + + RE E L W AEGKTS EIAMIL IS NT+N + ++ +K +++ +A Sbjct: 199 DFELTDRELECLFWIAEGKTSDEIAMILGISRNTINNYITSVMRKTATKTRSEAIAFAVR 258 Query: 237 TGLI 240 L+ Sbjct: 259 NNLV 262 >UniRef50_Q21GE5 Response regulator receiver n=2 Tax=Gammaproteobacteria RepID=Q21GE5_SACD2 Length = 303 Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 6/76 (7%) Query: 165 LMRLNDEI------VMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNM 218 L+RLN++ V+ + +KRE ++ W A+GKT+ EIA I+ IS TVN H + + Sbjct: 219 LIRLNNDTAVDEASVLKEQFGITKRESDVFLWLAKGKTNREIAQIIDISPRTVNKHLEQL 278 Query: 219 QKKINAPNKTQVACYA 234 KK+ N+T A A Sbjct: 279 FKKLAVDNRTTAAAMA 294 >UniRef50_Q1YUC8 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YUC8_9GAMM Length = 302 Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 40/66 (60%) Query: 169 NDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKT 228 NDE ++ + + RE E+L W ++GKT+ EIA+IL S T N H + + +K+N N+T Sbjct: 229 NDEELLREKFGLTAREAEVLTWISKGKTNHEIAIILDFSPRTANKHLEQIFRKLNVENRT 288 Query: 229 QVACYA 234 A + Sbjct: 289 TAAAVS 294 >UniRef50_UPI0001969032 hypothetical protein BACCELL_01743 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI0001969032 Length = 215 Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 2/69 (2%) Query: 174 MTPEMN--FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVA 231 + PEM SKRE+E+L+ +EG S EIA L IS NTV FH+K + K+ A N + + Sbjct: 145 LPPEMPQVLSKREQEVLKCISEGLKSNEIATKLYISVNTVEFHRKQIMLKLEAKNASDML 204 Query: 232 CYAAATGLI 240 A +G++ Sbjct: 205 IKAIKSGVL 213 >UniRef50_A5VEI3 Regulatory protein, LuxR n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VEI3_SPHWW Length = 301 Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 39/62 (62%) Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 + SKRE E L W+A GKT +IA+IL +S +TV + K + +K++A N++ A G Sbjct: 237 SLSKRELECLTWSARGKTVEDIAVILDLSADTVRVYLKRVNQKLDAVNRSHAVAKAMCLG 296 Query: 239 LI 240 +I Sbjct: 297 MI 298 >UniRef50_Q6FD15 Putative transcriptional regulator, luxR family n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FD15_ACIAD Length = 246 Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 38/61 (62%) Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 ++REKEIL+WTA G+ +EIA IL ISE TV H ++++KK+ + Q A G Sbjct: 184 LTQREKEILKWTAVGRKQSEIAEILKISERTVENHLRSIRKKLEVKSTGQAIASALLKGE 243 Query: 240 I 240 I Sbjct: 244 I 244 >UniRef50_B2J8J5 Two component transcriptional regulator, LuxR family n=3 Tax=Cyanobacteria RepID=B2J8J5_NOSP7 Length = 211 Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 39/61 (63%) Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 S RE E+LR A+GK + +I+ +L+I+E+TV FH N+ K+N ++TQ A G+ Sbjct: 149 LSDRELEVLRLIAKGKNNQQISNVLNIAESTVRFHTNNIFGKLNVSDRTQALVTALNRGI 208 Query: 240 I 240 + Sbjct: 209 V 209 >UniRef50_Q1QF64 Transcriptional regulator, LuxR family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QF64_NITHX Length = 234 Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 32/199 (16%) Query: 60 YTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARA------- 112 +T+YP W + Y K + IDPV+ + W+ +E +W +R Sbjct: 50 FTDYPVEWQNIYLEKRYTVIDPVVTTAKRTMKMFAWS----AEDPTVWRGSREIKQFYSE 105 Query: 113 ---HGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKM--------QLLVRES 161 G+R GV+ +P R S+ R + I + SD Q+++ L + Sbjct: 106 ATDFGIRSGVS----VPIRT----SYGRTAM--ITLASDRRQVELPPWDPMQAALALAYI 155 Query: 162 LMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKK 221 + L + + E++ S +E L W++ GK+ IA +L I TV F+ N + K Sbjct: 156 HIHLSLASASSLKVGEVSLSAQEATSLSWSSHGKSMNVIADLLGIKPRTVQFYLDNARDK 215 Query: 222 INAPNKTQVACYAAATGLI 240 + A N Q A LI Sbjct: 216 LGASNLQQAVRIAMEKKLI 234 >UniRef50_A6L0C8 Transcriptional regulator n=3 Tax=Bacteroides RepID=A6L0C8_BACV8 Length = 254 Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 28/65 (43%), Positives = 40/65 (61%) Query: 176 PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 PE+ S REKEIL+ + +G ++ EI L I NTV FH+K + +K++A N T+ AA Sbjct: 190 PELILSDREKEILQLSVKGLSNTEIGETLFIDANTVKFHKKKIFEKLHAENITEAVGIAA 249 Query: 236 ATGLI 240 LI Sbjct: 250 NLRLI 254 >UniRef50_A9CYJ1 Putative GerE/LuxR family transcriptional regulator n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CYJ1_9RHIZ Length = 224 Score = 53.1 bits (126), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 2/66 (3%) Query: 171 EIVMTPEM--NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKT 228 EI T + + + RE E L W EGKTS EIA+I+ IS NTVN + ++ K A ++ Sbjct: 153 EITTTSDSLSDLTDREVECLSWIGEGKTSDEIALIIGISRNTVNNYITSIMNKTGAKTRS 212 Query: 229 QVACYA 234 + +A Sbjct: 213 EAVAFA 218 >UniRef50_A3SSF6 Transcriptional regulator, LuxR family protein n=3 Tax=Rhodobacteraceae RepID=A3SSF6_9RHOB Length = 248 Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 7/133 (5%) Query: 110 ARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLN 169 AR G G+ + P +S R P ++ L L + S A MR Sbjct: 113 AREFGFADGLVCQVFGPQARNALVSIGFHPDRPRPTDAEVLDLHV-----ASQFAHMRFC 167 Query: 170 DEIV--MTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNK 227 + P S RE E+LRW A GK++ IA I+ +S +TV+ + + K++ ++ Sbjct: 168 ALVAGPAAPNRRLSPRELELLRWIARGKSNTSIAQIMGVSRHTVDTIMRRLFGKLDVTDR 227 Query: 228 TQVACYAAATGLI 240 T+ A A GLI Sbjct: 228 TRAAVRGLAFGLI 240 >UniRef50_D0X6W6 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0X6W6_VIBHA Length = 225 Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 40/68 (58%) Query: 171 EIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQV 230 E + PE + RE E+L W GK++ EI+ +L+ISE TV +H +N+ +K++ N+T Sbjct: 154 ETLPAPESQLTTRECELLPWLKLGKSNWEISRLLNISERTVKYHLQNIYRKLDVHNRTHA 213 Query: 231 ACYAAATG 238 A G Sbjct: 214 VSKAIELG 221 >UniRef50_C6Y3I6 Regulatory protein LuxR n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6Y3I6_PEDHD Length = 267 Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 27/60 (45%), Positives = 38/60 (63%) Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 S E++IL + A+G +S +IA +ISENTV H+KNM KK N N ++ +A T LI Sbjct: 208 SHHERDILCYMADGLSSKQIASRFNISENTVANHRKNMLKKTNTKNVAELVSFACKTQLI 267 >UniRef50_Q98HF2 Transcriptional regulator n=2 Tax=Mesorhizobium RepID=Q98HF2_RHILO Length = 265 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 37/61 (60%) Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 S RE+E L W +EGKT+ E+A+IL +S NTVN + + +K A N+ A +G+ Sbjct: 205 LSDRERECLFWVSEGKTTDEVAVILGVSSNTVNSYITHAIQKFAASNRAMAIATAIRSGI 264 Query: 240 I 240 I Sbjct: 265 I 265 >UniRef50_C8W5L4 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W5L4_DESAS Length = 223 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 1/74 (1%) Query: 167 RLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPN 226 ++ + +V + E N SKRE EIL+ ++ ++ EIA +L IS TV H N+ +K+ N Sbjct: 147 KMKNSVVESCE-NLSKREMEILKLMSQNHSNTEIAGMLYISLPTVKTHVSNILRKLGQQN 205 Query: 227 KTQVACYAAATGLI 240 + Q Y+ ATGLI Sbjct: 206 RAQAILYSIATGLI 219 >UniRef50_C6WVK1 ATP-dependent transcriptional regulator, MalT-like, LuxR family n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK1_METML Length = 274 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 35/57 (61%) Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 + S+RE E++ W GKT+ EI MILSIS+NTV H K + +K+N + Q A Sbjct: 197 SLSEREIEVISWIKAGKTNQEIGMILSISQNTVKSHLKRIFQKLNIGRRAQAVALLA 253 >UniRef50_A5V7U1 Regulatory protein, LuxR n=4 Tax=Proteobacteria RepID=A5V7U1_SPHWW Length = 278 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 5/127 (3%) Query: 118 GVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQ---LLVRESLMALMRLNDEIVM 174 G+ + LP +G +SFS C LS EL + LL + RL Sbjct: 137 GIVVPVHLPFSRIGMVSFS-CRDNRRDDLSRELDEHFETLYLLGHLFIEGYARLETGDRW 195 Query: 175 TPE-MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 P+ + ++ E LRW A GKT EIA I+ + T+ FH +N K+ A N++Q Sbjct: 196 LPDAVTLTRLEVNCLRWVARGKTDDEIATIMGRARPTIRFHLQNAAIKLGAANRSQAVFR 255 Query: 234 AAATGLI 240 A G + Sbjct: 256 AGQLGYL 262 >UniRef50_C7M1Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M1Y7_ACIFD Length = 222 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 39/68 (57%) Query: 173 VMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVAC 232 V+ ++ S RE+++L A G+T+ EIA L+ISE TV H ++ K+ A N+T Sbjct: 136 VLGSDVVLSDRERQVLELVARGRTNVEIAEALAISEATVKTHLAHVFDKVGATNRTSAVL 195 Query: 233 YAAATGLI 240 A GLI Sbjct: 196 RAMELGLI 203 >UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paenibacillaceae RepID=C0ZBD9_BREBN Length = 215 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Query: 174 MTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 M P + + RE+EI+ + GKT+ EI+ L I+ENTV H KN+ +K+ N+ Q+A Y Sbjct: 148 MVPAV-LTPREREIVMYVGAGKTNREISEALIIAENTVKNHLKNILEKLQLANRVQLAAY 206 Query: 234 AAATGLI 240 A L+ Sbjct: 207 AVRHHLV 213 >UniRef50_B0T7R0 Transcriptional regulator, LuxR family n=1 Tax=Caulobacter sp. K31 RepID=B0T7R0_CAUSK Length = 244 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 35/61 (57%) Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 + RE E LR+ A G+T A+ L I+ TV FH KN+ +K++A NK A + GL Sbjct: 180 LTAREIECLRFAAVGRTVADTGQALGITSRTVEFHLKNVAEKLDATNKVHAVAIAVSQGL 239 Query: 240 I 240 + Sbjct: 240 V 240 >UniRef50_B5ZTN8 Transcriptional regulator, LuxR family n=8 Tax=Rhizobium RepID=B5ZTN8_RHILW Length = 70 Score = 52.4 bits (124), Expect = 1e-05, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Query: 174 MTPEM--NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVA 231 M+P + N + RE EI+ W A GKT+AEI IL+IS TVN H N + ++ T + Sbjct: 1 MSPAIKSNVTPRETEIIGWMAAGKTAAEIGTILAISHITVNTHIANAKARLGVFKDTALV 60 Query: 232 CYAAATGLI 240 A G+I Sbjct: 61 AAALRNGII 69 >UniRef50_A6UCQ1 Regulatory protein LuxR n=2 Tax=Sinorhizobium RepID=A6UCQ1_SINMW Length = 247 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/62 (45%), Positives = 37/62 (59%) Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 S RE E LRW A GK+S EIA+IL IS TV+ + K+ +K++A N+ Q A Sbjct: 186 KLSSREIECLRWAAAGKSSDEIAIILGISAYTVSSYFKSATRKLDAVNRMQAIARAMRMK 245 Query: 239 LI 240 LI Sbjct: 246 LI 247 >UniRef50_C1DE28 Transcriptional regulatory protein AcoK, LuxR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DE28_AZOVD Length = 900 Score = 52.4 bits (124), Expect = 1e-05, Method: Composition-based stats. Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 7/144 (4%) Query: 104 QPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSARE-----IPILSDELQLKMQLLV 158 +PLW A G R +LP LG CS + +P+LS + Sbjct: 756 RPLWAIALWQGDERDAAVATLLPALQLGQRENLLCSLTDAGRALLPLLSRCASAEAGSGE 815 Query: 159 RESLMALMR--LNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQK 216 +A++R L + P + S+RE + LR A G+++ EIA L IS TV +H K Sbjct: 816 LAGYLAILRERLGGDDCAEPPFSLSERESQTLRLVAAGQSNKEIARTLDISVETVKWHLK 875 Query: 217 NMQKKINAPNKTQVACYAAATGLI 240 N+ K+ ++T+ A L+ Sbjct: 876 NLYGKLQVTSRTRAMSRARELSLL 899 >UniRef50_B2IKZ9 Transcriptional regulator, LuxR family n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IKZ9_BEII9 Length = 257 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 53/249 (21%), Positives = 100/249 (40%), Gaps = 20/249 (8%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 + D +F +T + QR + E++ + L + Q+ + Y+++ RP Sbjct: 3 INDSEF----QTYVKNLQRAKNFSEIHDCVLLVSCQMGFSYFAITEHFNTQPKRPVPMSI 58 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGL 115 +YP+ W S ++ K +DPV N W++ + + + E AR +GL Sbjct: 59 VHYPKDWESLFRRKRLFGVDPVQRASNNRLRGFFWSEVPRMIPMSRQDHMILELARKNGL 118 Query: 116 RRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEI--- 172 G T +P R G SF + E+ L+ K L+ A + + Sbjct: 119 GDGYTVPANIPGRYNGSCSFGMKVSEEV-----RLEFKHLPLLDYIGTAAFEIAQSLHHG 173 Query: 173 VMTPEMN---FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQ 229 E++ + R+ + + A+G ++ EI L+I T H K+ ++ +T Sbjct: 174 SAPGELDRPRLTDRQLDCVALLAQGLSTVEIGHALNIRYETAVQHIKDASQRYGVNRRTP 233 Query: 230 VACYAAATG 238 +A A G Sbjct: 234 LAVRALLDG 242 >UniRef50_B6IU89 Glycerol metabolism activator AgmR n=1 Tax=Rhodospirillum centenum SW RepID=B6IU89_RHOCS Length = 205 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 39/61 (63%) Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 +F++RE+E+L + +G ++ EIA LS+ E TV H + + +K+ A N+TQ A A G Sbjct: 143 SFTRREREVLDFLLKGCSNKEIARALSLEEVTVKLHVRGLCRKLGAKNRTQAAMRAVEMG 202 Query: 239 L 239 L Sbjct: 203 L 203 >UniRef50_B3PDX5 Response regulator n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PDX5_CELJU Length = 225 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/74 (39%), Positives = 41/74 (55%) Query: 167 RLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPN 226 R+ TP + RE EILR A+G T E+A L IS +TV H KN+ +K+ A N Sbjct: 150 RMGGSTPATPTPELTPRETEILRGIAKGFTYTELAEWLGISRHTVPVHIKNIYRKLAANN 209 Query: 227 KTQVACYAAATGLI 240 +++ A+ GLI Sbjct: 210 RSEAVYEASKRGLI 223 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 26/61 (42%), Positives = 34/61 (55%) Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 S RE+EIL+ AEG ++ I IL IS TV H+ N+ KK+N + YA GL Sbjct: 159 LSDREREILKLVAEGNSNESIGKILGISPATVKVHRANIMKKLNLHKVADLVMYAIRAGL 218 Query: 240 I 240 I Sbjct: 219 I 219 >UniRef50_A4EXT1 Possible LuxR family protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EXT1_9RHOB Length = 207 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 75/182 (41%), Gaps = 13/182 (7%) Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGLRRG 118 + Y +AWV+ Y + F+ DP + GH+ W +L+ E++ ++ A GLR G Sbjct: 37 STYSKAWVARYVERLFIQTDPTVQFGLSRTGHVTWKQLQELYPESKTFFDEAALFGLRHG 96 Query: 119 VTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEM 178 T L R G +S CS +E +L+M L L+ E + Sbjct: 97 NT----LSLRIDGQISVLSCSGSPW----NEQELRMADAALRGLAVLLSKPRE---GRDF 145 Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 +R K++L G EIA ILSI TV ++ + N Q+ G Sbjct: 146 GLPERVKDVLALMVSGARDQEIAEILSIKIETVRARRQLAFQLTNTRTIAQLISEVIKNG 205 Query: 239 LI 240 LI Sbjct: 206 LI 207 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 26/61 (42%), Positives = 35/61 (57%) Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 + RE E+LR A G T+ E+A L ISE TV FH ++ K+ A N+TQ A GL Sbjct: 145 LTPRELEVLRLVARGLTNREVARALFISERTVKFHVSSLLAKLRAENRTQAVAIARERGL 204 Query: 240 I 240 + Sbjct: 205 L 205 >UniRef50_Q1NCQ8 Putative uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NCQ8_9SPHN Length = 256 Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/234 (20%), Positives = 97/234 (41%), Gaps = 9/234 (3%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQ 72 +L +++ + EE+ + A ++ + +++L P+ RP +YP A V Sbjct: 15 LLRALRKVASREELAALMTCLASEIGFRHFALIHHDPLAGERPDRVDIRDYPAAIVDRLF 74 Query: 73 AKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYLMLPN 127 + L DPV+ FS G +W+D + + E HGL G+T +L Sbjct: 75 DQGQLRRDPVIRGCLFSDGAFLWSDLDKIITFTRQDRHSLEFGAGHGLNEGITVPHVLLG 134 Query: 128 RALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR-LNDEIVMTPEMNFSKREKE 186 +G +F+ + P L+ Q+ + A R L ++ P R ++ Sbjct: 135 ECIGSCTFAGATD---PQLASRYLGFAQITGIFAFQAARRMLLASPLIGPAPRLHPRPRD 191 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + G ++ EIA L ++ TV+ + ++ +A ++ ++ A G I Sbjct: 192 CVVLAGRGFSNKEIARELGLTPRTVDGYLTEARRLFDAHDRAELVVSAVLAGEI 245 >UniRef50_A4AF49 Putative two-component system response regulator n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AF49_9ACTN Length = 538 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 40/65 (61%) Query: 176 PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 PE S RE E+LR ++G ++ EIA L +SE+TV+ H N+ K++ ++T A YA Sbjct: 474 PEGQLSARELEVLRLVSQGLSNPEIAASLVLSEHTVHRHVANILTKLDQTSRTGAASYAI 533 Query: 236 ATGLI 240 GL+ Sbjct: 534 QAGLL 538 >UniRef50_D1SQ54 Two component transcriptional regulator, LuxR family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SQ54_9BURK Length = 308 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 37/60 (61%) Query: 176 PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 P ++ + RE E+L W A+GKT+ +IA IL +S TVN H +++ +K+ +T A A Sbjct: 243 PRVDLTPRETEVLSWIAKGKTNRDIADILGMSPRTVNKHLEHIFEKLGVETRTAAAALAG 302 >UniRef50_B9TH31 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TH31_RICCO Length = 219 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 3/61 (4%) Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 S RE+EIL W GKT+ EI MIL+IS NTV H K + +K++ + Q A TG Sbjct: 154 GLSDREQEILHWVRSGKTNLEIGMILNISANTVKNHLKRIFQKLDVSCRAQA---VAKTG 210 Query: 239 L 239 + Sbjct: 211 M 211 >UniRef50_A4U0R2 DNA-binding response regulator, LuxR family n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U0R2_9PROT Length = 228 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 36/60 (60%) Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 S+RE EIL EG+T+ EIA+ L + E T+ H +N+ +KI A N+ Q A ++G Sbjct: 159 KLSRRESEILALLVEGRTNKEIAIALELQEITIKVHLRNVYRKIGAANRAQAVRIAMSSG 218 >UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeobacter violaceus RepID=Q7NN43_GLOVI Length = 217 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 35/61 (57%) Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 ++RE+E+L W A G ++ EI L IS TV H + +K+ A ++TQ A A GL Sbjct: 154 LTEREREVLGWIARGASNPEIGRQLHISSGTVRVHVHAILRKLGATDRTQAAVLALEKGL 213 Query: 240 I 240 I Sbjct: 214 I 214 >UniRef50_Q0C2U0 DNA-binding response regulator FixJ n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C2U0_HYPNA Length = 205 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 2/63 (3%) Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQV--ACYAAA 236 N + REKE+L +G+T+ EIA+ L IS TV H+ N+ +K+ A N + V +AA Sbjct: 142 NLTAREKEVLHGLVDGQTNKEIAISLDISPRTVEIHRANVMEKMGASNLSTVLRIAFAAG 201 Query: 237 TGL 239 GL Sbjct: 202 IGL 204 >UniRef50_B1ZU68 Two component transcriptional regulator, LuxR family n=2 Tax=Opitutus terrae PB90-1 RepID=B1ZU68_OPITP Length = 238 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 6/84 (7%) Query: 157 LVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQK 216 L+++ A MRL +T RE+E+LR+ AEG S EIA L++S TV H+ Sbjct: 138 LLQQEAHAAMRLGAGPALT------NREREVLRYVAEGLGSKEIADRLALSTRTVENHRA 191 Query: 217 NMQKKINAPNKTQVACYAAATGLI 240 N+ K+ + Q+ YAA GLI Sbjct: 192 NILKRTGLRSVAQLVLYAARLGLI 215 >UniRef50_B6B644 Response regulator receiver protein, putative n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B644_9RHOB Length = 211 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 15/186 (8%) Query: 57 VAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHG 114 V ++ Y + WV Y + +L +DP + S G + W + LF ++ +E A +G Sbjct: 39 VFVHSTYAQRWVDRYVDQAYLLVDPTIQFGLSSTGWVTWKELERLFPSSKHFFEDAVKYG 98 Query: 115 LRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVM 174 L G T L A G +S CS P SDE +L+ + R +L AL L E Sbjct: 99 LVHGNT----LAISADGRVSVLSCSG---PEWSDE-ELR---IARAALYALHALEYE--P 145 Query: 175 TPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 + + + K++LR G EIA L + TV ++ + ++A Q+ Sbjct: 146 SHSITLTTPVKDVLRMMCNGCKDQEIAENLGVKLETVRARRRTAMQALDAKTSAQLISQV 205 Query: 235 AATGLI 240 GLI Sbjct: 206 IKFGLI 211 >UniRef50_A1VTE6 Two component transcriptional regulator, LuxR family n=9 Tax=Comamonadaceae RepID=A1VTE6_POLNA Length = 292 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 36/60 (60%) Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 S+RE+++L+ A G +S EI L IS T N H KN+ +K+N N+ Q +AA GL Sbjct: 232 LSEREQQVLKLVASGHSSTEIGARLVISWQTANTHIKNIYRKLNVRNRAQAVSFAANHGL 291 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P07026 Regulatory protein sdiA n=104 Tax=Enterobacteria... 348 1e-94 UniRef50_B5EJV5 Transcriptional regulator, LuxR family n=4 Tax=A... 261 1e-68 UniRef50_C8QEN4 Transcriptional regulator, LuxR family n=1 Tax=P... 259 8e-68 UniRef50_UPI00016A4E80 probable transcriptional activator of quo... 255 7e-67 UniRef50_B2I0W2 DNA-binding HTH domain-containing protein n=9 Ta... 254 2e-66 UniRef50_D2TD82 DNA-binding transcriptional activator SdiA n=2 T... 252 9e-66 UniRef50_C5D054 Transcriptional regulator, LuxR family n=1 Tax=V... 252 1e-65 UniRef50_Q5EM19 ExpR n=2 Tax=Erwinia RepID=Q5EM19_ERWAM 250 2e-65 UniRef50_A0MSL2 Transcriptional regulator n=8 Tax=Burkholderia c... 250 3e-65 UniRef50_P54292 Regulatory protein rhlR n=12 Tax=Bacteria RepID=... 250 3e-65 UniRef50_Q2SXK0 Autoinducer-binding transcriptional regulator, L... 246 4e-64 UniRef50_B1Z3D8 Transcriptional regulator, LuxR family n=4 Tax=B... 237 2e-61 UniRef50_P58590 Transcriptional activator protein solR n=8 Tax=B... 234 2e-60 UniRef50_D0KZC8 Transcriptional regulator, LuxR family n=1 Tax=H... 233 4e-60 UniRef50_B7VAX6 Quorum-sensing control repressor n=7 Tax=Pseudom... 232 7e-60 UniRef50_A1KWS2 Quorum sensing LuxR family sensor regulator n=3 ... 232 7e-60 UniRef50_A9JPW9 PmrR protein n=1 Tax=Pseudomonas sp. RW10S2 RepI... 232 9e-60 UniRef50_A4JSV0 Transcriptional regulator, LuxR family n=2 Tax=B... 232 9e-60 UniRef50_Q2Y6B5 Transcriptional regulator, LuxR family n=1 Tax=N... 232 1e-59 UniRef50_A4BB65 LuxR, transcriptional regulator n=1 Tax=Reinekea... 228 9e-59 UniRef50_UPI00016A49A6 transcriptional regulator, LuxR family pr... 227 2e-58 UniRef50_D0B4P5 Transcriptional activator n=39 Tax=Brucellaceae ... 227 2e-58 UniRef50_Q51786 Transcriptional activator protein phzR n=6 Tax=P... 226 6e-58 UniRef50_Q0B318 Transcriptional regulator, LuxR family n=3 Tax=B... 224 2e-57 UniRef50_C4I3H7 Autoinducer-binding transcriptional regulator, L... 223 3e-57 UniRef50_Q88E21 Transcriptional regulator, LuxR family n=7 Tax=P... 223 4e-57 UniRef50_P74946 Transcriptional activator protein vanR n=3 Tax=V... 221 2e-56 UniRef50_C3K2E5 Putative LuxR-family regulatory protein n=1 Tax=... 220 4e-56 UniRef50_C5ANM9 DNA-binding HTH domain-containing protein n=1 Ta... 218 2e-55 UniRef50_A0KHA7 Transcriptional activator protein AhyR/asaR n=2 ... 217 3e-55 UniRef50_A4U2E2 Regulatory protein, LuxR:Autoinducer-binding n=1... 215 9e-55 UniRef50_Q3Y8H6 PpuR n=3 Tax=Pseudomonas putida RepID=Q3Y8H6_PSEPU 211 2e-53 UniRef50_Q2T3H4 Autoinducer-binding transcriptional regulator, L... 209 6e-53 UniRef50_Q9AH79 MupR n=2 Tax=Pseudomonas fluorescens RepID=Q9AH7... 208 9e-53 UniRef50_A0AX00 Transcriptional regulator, LuxR family n=6 Tax=B... 208 1e-52 UniRef50_B6R6S8 Transcriptional regulator, LuxR family n=1 Tax=P... 207 3e-52 UniRef50_P0A3J5 Transcriptional activator protein ahyR/asaR n=89... 205 1e-51 UniRef50_A1TTR7 Transcriptional regulator, LuxR family n=3 Tax=A... 205 1e-51 UniRef50_P25084 Transcriptional activator protein lasR n=10 Tax=... 204 2e-51 UniRef50_Q13KP8 Transcriptional regulator, LuxR family n=3 Tax=B... 203 6e-51 UniRef50_B2JQL2 Transcriptional regulator, LuxR family n=5 Tax=B... 202 6e-51 UniRef50_B2UGC8 Transcriptional regulator, LuxR family n=1 Tax=R... 202 1e-50 UniRef50_B1M9X4 Transcriptional regulator, LuxR family n=2 Tax=M... 202 1e-50 UniRef50_P35327 Transcriptional activator protein luxR n=26 Tax=... 201 2e-50 UniRef50_P55629 Putative HTH-type transcriptional regulator y4qH... 201 2e-50 UniRef50_C5B507 LuxR type transcriptional regulator n=1 Tax=Meth... 200 4e-50 UniRef50_Q21EX4 Transcriptional regulator, LuxR family n=1 Tax=S... 199 5e-50 UniRef50_B9K1Q2 DNA-binding HTH domain-containing protein n=1 Ta... 199 6e-50 UniRef50_A7KC31 Transcriptional activator protein n=1 Tax=Pseudo... 198 9e-50 UniRef50_B1Z7Q1 Transcriptional regulator, LuxR family n=3 Tax=M... 198 1e-49 UniRef50_Q9ANB1 ID375 n=2 Tax=Bradyrhizobium japonicum RepID=Q9A... 198 1e-49 UniRef50_B1VJE7 VR protein n=2 Tax=Pseudomonas fuscovaginae RepI... 198 1e-49 UniRef50_A6CUQ5 LuxR, transcriptional regulator n=1 Tax=Vibrio s... 198 2e-49 UniRef50_Q3SUZ7 Transcriptional regulatory protein, LuxR family ... 197 2e-49 UniRef50_B3Q959 Transcriptional regulator, LuxR family n=7 Tax=B... 196 4e-49 UniRef50_D2LFU9 Transcriptional regulator, LuxR family n=1 Tax=R... 196 5e-49 UniRef50_C5V7F6 Transcriptional regulator, LuxR family n=1 Tax=G... 196 5e-49 UniRef50_B7T9X0 LuxR family transcriptional regulator n=2 Tax=Ba... 195 7e-49 UniRef50_A0ZSG9 LuxR n=1 Tax=Shewanella hanedai RepID=A0ZSG9_SHEHA 195 1e-48 UniRef50_B0U8W7 Transcriptional regulator, LuxR family n=4 Tax=M... 195 2e-48 UniRef50_Q2T747 Transcriptional regulator, LuxR family n=26 Tax=... 194 2e-48 UniRef50_A3JLR7 Transcriptional regulator, LuxR family protein n... 194 2e-48 UniRef50_Q2RNV6 Transcriptional regulator, LuxR family n=1 Tax=R... 194 2e-48 UniRef50_B0ZTC2 Transcriptional regulator n=4 Tax=Mesorhizobium ... 194 2e-48 UniRef50_A4WT88 Autoinducer-binding domain protein n=8 Tax=Rhodo... 192 7e-48 UniRef50_Q15YZ8 Transcriptional regulator, LuxR family n=1 Tax=P... 192 1e-47 UniRef50_D0LSA4 Transcriptional regulator, LuxR family n=1 Tax=H... 191 2e-47 UniRef50_Q98A91 Transcriptional regulator n=4 Tax=Mesorhizobium ... 191 2e-47 UniRef50_Q0B5I4 Transcriptional regulator, LuxR family n=1 Tax=B... 189 7e-47 UniRef50_B1M2Q8 Transcriptional regulator, LuxR family n=1 Tax=M... 188 9e-47 UniRef50_A9DRS2 Transcriptional regulator, LuxR family protein n... 188 2e-46 UniRef50_C9NVD6 Transcriptional activator protein luxR n=1 Tax=V... 187 3e-46 UniRef50_C4L8Q9 Transcriptional regulator, LuxR family n=1 Tax=T... 187 4e-46 UniRef50_Q1GQ40 Transcriptional regulator, LuxR family n=1 Tax=S... 186 5e-46 UniRef50_A9HQR0 Putative transcriptional regulator, luxR family ... 186 6e-46 UniRef50_Q46967 Transcriptional activator protein echR n=100 Tax... 186 7e-46 UniRef50_B5A461 Quorum sensing regulator n=1 Tax=Mesorhizobium t... 185 9e-46 UniRef50_C6B001 Transcriptional regulator, LuxR family n=13 Tax=... 185 1e-45 UniRef50_Q6B346 Acylhomoserine lactone dependent transcriptional... 184 2e-45 UniRef50_Q4ZNM6 Regulatory protein, LuxR n=9 Tax=Gammaproteobact... 184 2e-45 UniRef50_B8I9S3 Transcriptional regulator, LuxR family n=1 Tax=M... 184 3e-45 UniRef50_C3KBP0 Putative LuxR-family regulatory protein n=2 Tax=... 183 4e-45 UniRef50_C8SVZ2 Transcriptional regulator, LuxR family n=2 Tax=M... 183 5e-45 UniRef50_C4RYA9 Transcription regulator SdiA n=1 Tax=Yersinia be... 182 7e-45 UniRef50_A6UE86 Regulatory protein LuxR n=4 Tax=Rhizobiales RepI... 182 9e-45 UniRef50_A5EUQ4 Transcriptional regulator, LuxR family n=1 Tax=B... 180 3e-44 UniRef50_A4JQY4 Response regulator receiver protein n=1 Tax=Burk... 180 3e-44 UniRef50_Q8KW81 RC109 n=1 Tax=Ruegeria sp. PR1b RepID=Q8KW81_9RHOB 180 4e-44 UniRef50_B1K7Y6 Transcriptional regulator, LuxR family n=3 Tax=B... 180 4e-44 UniRef50_B0M190 AHL-dependent transcriptional regulator n=2 Tax=... 179 6e-44 UniRef50_Q9L6U7 Acylhomoserine lactone dependent transcriptional... 179 6e-44 UniRef50_A5EJ34 Putative transcriptional activator n=1 Tax=Brady... 179 7e-44 UniRef50_Q07P69 Transcriptional regulator, LuxR family n=2 Tax=B... 179 7e-44 UniRef50_Q21BG2 Transcriptional regulator, LuxR family n=1 Tax=R... 178 1e-43 UniRef50_A4U2G3 Transcriptional activator protein n=1 Tax=Magnet... 178 1e-43 UniRef50_Q03316 Regulatory protein rhiR n=2 Tax=Rhizobium legumi... 176 4e-43 UniRef50_D2U307 Quorum-sensing transcriptional activator n=1 Tax... 176 4e-43 UniRef50_Q4ZW02 Regulatory protein, LuxR:Autoinducer-binding n=9... 176 5e-43 UniRef50_Q2NS60 Transcriptional activator n=1 Tax=Sodalis glossi... 176 6e-43 UniRef50_Q46751 Transcriptional activator protein carR n=4 Tax=E... 176 7e-43 UniRef50_Q3K6H8 LuxR family regulatory protein n=1 Tax=Pseudomon... 176 7e-43 UniRef50_Q7CWE0 Transcriptional regulator, LuxR family n=1 Tax=A... 175 8e-43 UniRef50_B9TKR4 Transcriptional activator protein ahyR/asaR, put... 175 1e-42 UniRef50_A8LML6 Putative transcriptional regulator n=1 Tax=Dinor... 175 1e-42 UniRef50_A3UFL6 Transcriptional regulatory protein, LuxR family ... 175 1e-42 UniRef50_B7T9X4 LuxR family transcriptional regulator n=1 Tax=un... 175 1e-42 UniRef50_Q1GPX8 Transcriptional regulator, LuxR family n=1 Tax=S... 175 2e-42 UniRef50_C5AK35 Autoinducer-binding domain protein n=2 Tax=Burkh... 174 2e-42 UniRef50_Q1QFH8 Transcriptional regulator, LuxR family n=3 Tax=B... 174 3e-42 UniRef50_Q39VH7 Transcriptional regulator, LuxR family n=1 Tax=G... 174 3e-42 UniRef50_A3T328 Autoinducer-binding transcriptional regulator Lu... 174 3e-42 UniRef50_Q2NWB5 Transcriptional activator protein n=1 Tax=Sodali... 173 3e-42 UniRef50_A8GCU6 Transcriptional regulator, LuxR family n=2 Tax=S... 173 4e-42 UniRef50_A5V2N0 Transcriptional regulator, LuxR family n=1 Tax=S... 173 6e-42 UniRef50_Q89V15 Transcriptional regulatory protein n=1 Tax=Brady... 173 7e-42 UniRef50_B9JYA3 Transcriptional regulator protein n=1 Tax=Agroba... 172 8e-42 UniRef50_Q13HW9 Transcriptional regulator, LuxR family n=3 Tax=B... 172 8e-42 UniRef50_Q1QF64 Transcriptional regulator, LuxR family n=1 Tax=N... 172 9e-42 UniRef50_A2SMG0 Putative LuxR-family transcriptional regulator n... 171 1e-41 UniRef50_B6VM55 Similar to probable transcription regulator SdiA... 169 6e-41 UniRef50_UPI00018738D8 transcriptional activator of quorum sensi... 169 7e-41 UniRef50_A7IQ01 Autoinducer-binding domain protein n=1 Tax=Xanth... 169 7e-41 UniRef50_Q19U14 Transcriptional activator AlpR n=1 Tax=Azospiril... 168 1e-40 UniRef50_Q2K2Q3 Autoinducer transcriptional regulator protein n=... 168 1e-40 UniRef50_C8SKW4 Transcriptional regulator, LuxR family n=1 Tax=M... 168 1e-40 UniRef50_B2VEE0 Transcriptional activator protein n=1 Tax=Erwini... 168 1e-40 UniRef50_B3PCB5 Putative two-component transcriptional regulator... 168 2e-40 UniRef50_Q7NQP7 Transcriptional activator, LuxR/UhpA family of r... 168 2e-40 UniRef50_P54293 Transcriptional activator protein esaR n=7 Tax=E... 168 2e-40 UniRef50_B2IKZ9 Transcriptional regulator, LuxR family n=1 Tax=B... 168 2e-40 UniRef50_D2M390 Transcriptional regulator, LuxR family n=1 Tax=R... 167 3e-40 UniRef50_C5B5L7 Putative uncharacterized protein n=1 Tax=Methylo... 167 4e-40 UniRef50_A0KQW9 Transcriptional activator protein AhyR/asaR n=2 ... 166 4e-40 UniRef50_Q1NCQ8 Putative uncharacterized protein n=1 Tax=Sphingo... 166 4e-40 UniRef50_B2SK12 Transcriptional regulator AhyR/AsaR family n=15 ... 166 4e-40 UniRef50_B2IHP8 Transcriptional regulator, LuxR family n=2 Tax=B... 166 5e-40 UniRef50_A5ELZ2 Transcriptional regulator, LuxR family n=1 Tax=B... 166 5e-40 UniRef50_Q216V3 Transcriptional regulator, LuxR family n=1 Tax=R... 165 8e-40 UniRef50_C8SNG6 Transcriptional regulator, LuxR family n=1 Tax=M... 165 1e-39 UniRef50_Q1NBZ0 Transcriptional regulator, LuxR family protein n... 165 1e-39 UniRef50_Q9F5D3 Riorf119 protein n=2 Tax=Agrobacterium rhizogene... 165 1e-39 UniRef50_A6ULF7 Response regulator receiver protein n=1 Tax=Sino... 165 1e-39 UniRef50_P55407 Probable transcriptional activator protein traR ... 164 3e-39 UniRef50_Q2T4M4 Autoinducer-binding transcriptional regulator, L... 163 3e-39 UniRef50_Q161C2 Transcription regulator, LuxR family, putative n... 163 4e-39 UniRef50_Q11FX6 Transcriptional regulator, LuxR family n=1 Tax=C... 163 4e-39 UniRef50_C6B8S2 Transcriptional regulator, LuxR family n=1 Tax=R... 163 5e-39 UniRef50_B5J2H2 Autoinducer binding domain protein n=6 Tax=Rhodo... 163 6e-39 UniRef50_A5P6H4 Transcriptional regulator, LuxR family protein n... 162 7e-39 UniRef50_C5ADX8 Acylhomoserine lactone dependent transcriptional... 162 8e-39 UniRef50_Q28T92 Transcriptional regulator, LuxR family n=1 Tax=J... 162 9e-39 UniRef50_B9K3B4 Two-component transcriptional regulator LuxR fam... 162 1e-38 UniRef50_A9D281 Probable transcriptional regulator protein, LuxR... 161 1e-38 UniRef50_Q1GMP0 Transcriptional regulator, LuxR family n=2 Tax=R... 161 1e-38 UniRef50_B4RHX3 Transcriptional regulator, LuxR family n=1 Tax=P... 161 2e-38 UniRef50_B1KKQ1 Transcriptional regulator, LuxR family n=1 Tax=S... 161 2e-38 UniRef50_B6R4Z6 Transcriptional regulator, LuxR family protein n... 159 9e-38 UniRef50_B2IL02 Transcriptional regulator, LuxR family n=1 Tax=B... 158 1e-37 UniRef50_C6B9S9 Transcriptional regulator, LuxR family n=11 Tax=... 158 2e-37 UniRef50_C6P1V2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Si... 158 2e-37 UniRef50_D2TJP9 Quorum sensing transcriptional regulator CroR n=... 157 3e-37 UniRef50_Q2RSB6 Transcriptional regulator, LuxR family n=1 Tax=R... 157 3e-37 UniRef50_A5G659 Transcriptional regulator, LuxR family n=1 Tax=G... 157 3e-37 UniRef50_Q11IH2 Transcriptional regulator, LuxR family n=1 Tax=C... 157 4e-37 UniRef50_C4XN36 LuxR family transcriptional regulator n=1 Tax=De... 156 6e-37 UniRef50_B3VN68 PanR n=1 Tax=Pantoea sp. CWB304 RepID=B3VN68_9ENTR 154 2e-36 UniRef50_B9LZZ1 Transcriptional regulator, LuxR family n=1 Tax=G... 154 2e-36 UniRef50_C4K6Q5 Autoinducer response regulator n=2 Tax=Enterobac... 154 3e-36 UniRef50_C5B5L8 Putative uncharacterized protein n=1 Tax=Methylo... 154 3e-36 UniRef50_B5ZUI2 Transcriptional regulator, LuxR family n=8 Tax=R... 153 3e-36 UniRef50_A3SSF6 Transcriptional regulator, LuxR family protein n... 151 3e-35 UniRef50_B9JSF3 Transcriptional regulator LuxR family n=5 Tax=Rh... 150 6e-35 UniRef50_A6U6L7 Regulatory protein LuxR n=3 Tax=Rhizobiaceae Rep... 149 6e-35 UniRef50_A8LML2 Putative transcriptional regulator n=1 Tax=Dinor... 149 7e-35 UniRef50_A6F7D7 Transcriptional regulator, LuxR family n=1 Tax=M... 148 1e-34 UniRef50_A6U9S1 Regulatory protein LuxR n=3 Tax=Rhizobiaceae Rep... 147 2e-34 UniRef50_A6U6L8 Regulatory protein LuxR n=3 Tax=Rhizobiaceae Rep... 147 3e-34 UniRef50_C8Q1R2 Transcriptional regulator, LuxR family n=4 Tax=E... 146 6e-34 UniRef50_Q4KAK4 Transcriptional regulator, LuxR family n=1 Tax=P... 145 1e-33 UniRef50_Q6FD15 Putative transcriptional regulator, luxR family ... 145 2e-33 UniRef50_A9DE85 Probable transcriptional regulator protein, LuxR... 143 4e-33 UniRef50_A5P6U9 Transcriptional regulator, LuxR family protein n... 143 4e-33 UniRef50_P54294 Transcriptional activator protein traR n=14 Tax=... 142 8e-33 UniRef50_A9D0L4 Putative LuxR/GerE family transcriptional regula... 142 1e-32 UniRef50_D1SY03 Transcriptional regulator, LuxR family n=1 Tax=A... 141 2e-32 UniRef50_A4ELE0 Transcriptional regulator, LuxR family protein n... 140 3e-32 UniRef50_Q2YJ50 HTH-type quorum sensing-dependent transcriptiona... 140 3e-32 UniRef50_Q28MF2 Transcriptional regulator, LuxR family n=1 Tax=J... 140 4e-32 UniRef50_B3DZX3 Transcriptional regulator LuxR family n=1 Tax=Me... 139 8e-32 UniRef50_A5VEI3 Regulatory protein, LuxR n=1 Tax=Sphingomonas wi... 139 9e-32 UniRef50_A9CI30 Transcriptional regulator, LuxR family n=1 Tax=A... 138 2e-31 UniRef50_D1RJW3 LuxR family transcriptional regulator n=1 Tax=Le... 137 3e-31 UniRef50_B9JA22 Transcriptional regulator protein n=10 Tax=Rhizo... 135 1e-30 UniRef50_A5PE73 Transcriptional regulator, LuxR family protein n... 135 1e-30 UniRef50_C8QBU4 Transcriptional regulator, LuxR family n=2 Tax=E... 135 2e-30 UniRef50_B6B644 Response regulator receiver protein, putative n=... 134 3e-30 UniRef50_Q7MYV6 Similar to transcription regulator n=2 Tax=Photo... 133 6e-30 UniRef50_D0X6W6 Putative uncharacterized protein n=1 Tax=Vibrio ... 133 7e-30 UniRef50_B4SS41 Transcriptional regulator, LuxR family n=3 Tax=S... 133 7e-30 UniRef50_Q1YE62 Possible transcriptional regulator, lysR family ... 132 1e-29 UniRef50_B7UX52 Probable transcriptional regulator n=5 Tax=Pseud... 132 1e-29 UniRef50_B9JZN6 Transcriptional regulator LuxR family n=1 Tax=Ag... 132 1e-29 UniRef50_Q48KM4 Transcriptional regulator, LuxR family n=6 Tax=P... 131 2e-29 UniRef50_A3PQ79 Response regulator receiver protein n=3 Tax=Rhod... 130 3e-29 UniRef50_A4EXT1 Possible LuxR family protein n=1 Tax=Roseobacter... 129 9e-29 UniRef50_C6XPJ3 Transcriptional regulator, LuxR family n=1 Tax=H... 128 1e-28 UniRef50_A6UCQ1 Regulatory protein LuxR n=2 Tax=Sinorhizobium Re... 126 5e-28 UniRef50_A3JLR6 Transcriptional regulator, LuxR family protein n... 124 2e-27 UniRef50_B0SZK2 Transcriptional regulator, LuxR family n=4 Tax=A... 123 4e-27 UniRef50_B9J7F2 Transcriptional regulator protein n=10 Tax=Rhizo... 122 8e-27 UniRef50_A5V7U1 Regulatory protein, LuxR n=4 Tax=Proteobacteria ... 118 2e-25 UniRef50_B9JVS5 Transcriptional regulator LuxR family n=3 Tax=Ag... 117 3e-25 UniRef50_A3PQ95 Response regulator receiver protein n=4 Tax=Rhod... 117 4e-25 UniRef50_Q1GYL3 Transcriptional regulator, LuxR family n=1 Tax=M... 116 6e-25 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 116 6e-25 UniRef50_Q8ZSI8 Transcriptional regulator n=7 Tax=Cyanobacteria ... 115 1e-24 UniRef50_C3JU17 Two-component system response regulator n=2 Tax=... 114 2e-24 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 114 3e-24 UniRef50_A9D9Y9 Putative transcriptional regulator protein, LuxR... 113 5e-24 UniRef50_A4XEP8 Regulatory protein, LuxR n=2 Tax=Sphingomonadace... 111 2e-23 UniRef50_A9HYE4 Transcriptional regulator, LuxR-family n=2 Tax=P... 111 2e-23 UniRef50_C6B0L0 Transcriptional regulator, LuxR family n=10 Tax=... 111 3e-23 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 111 3e-23 Sequences not found previously or not previously below threshold: UniRef50_Q6LB43 Probable TraR n=1 Tax=Oligotropha carboxidovoran... 175 1e-42 UniRef50_Q169S8 Transcriptional activator protein RaiR, putative... 163 4e-39 UniRef50_C5SPH1 Transcriptional regulator, LuxR family n=1 Tax=A... 163 5e-39 UniRef50_C7D7H9 Autoinducer-binding transcriptional regulator Lu... 160 3e-38 UniRef50_Q216C2 Transcriptional regulator, LuxR family n=2 Tax=R... 160 3e-38 UniRef50_A3SQM2 Autoinducer-binding transcriptional regulator Lu... 158 1e-37 UniRef50_A9D313 Putative AHL-dependent transcriptional regulator... 157 3e-37 UniRef50_D0DE55 Regulatory protein, LuxR n=1 Tax=Citreicella sp.... 152 1e-35 UniRef50_B8IHS1 Transcriptional regulator, LuxR family n=1 Tax=M... 145 1e-33 UniRef50_A5VH61 Regulatory protein, LuxR n=2 Tax=Sphingomonas Re... 144 2e-33 UniRef50_O54452 Transcriptional activator protein raiR n=9 Tax=R... 142 8e-33 UniRef50_B9JII6 Transcriptional regulator protein n=1 Tax=Agroba... 136 8e-31 UniRef50_A3WCG7 Two-component transcriptional regulator, LuxR fa... 133 3e-30 UniRef50_C9D313 Transcriptional regulator AhyR/asaR family n=1 T... 131 2e-29 UniRef50_A4KVQ8 Probable transcription activator TraR n=2 Tax=Rh... 130 6e-29 UniRef50_B0T7Q6 Transcriptional regulator, LuxR family n=1 Tax=C... 126 8e-28 UniRef50_Q2RT10 Transcriptional regulator, LuxR family n=1 Tax=R... 125 1e-27 UniRef50_A0P1W5 Transcriptional regulator, LuxR family protein n... 124 3e-27 UniRef50_C4RAJ6 Transcriptional Regulator, LuxR family n=1 Tax=m... 124 3e-27 UniRef50_B3RAC5 Putative transcriptional regulator, LuxR family ... 123 5e-27 UniRef50_A5F0P9 Transcriptional regulator, LuxR family n=25 Tax=... 122 1e-26 UniRef50_A9E0R1 Transcription regulator, LuxR family, putative n... 122 1e-26 UniRef50_C6XN41 Transcriptional regulator, LuxR family n=1 Tax=H... 121 2e-26 UniRef50_A9GRC0 Response regulator n=2 Tax=Phaeobacter gallaecie... 115 1e-24 UniRef50_Q1GHC1 Transcriptional regulator, LuxR family n=15 Tax=... 115 1e-24 UniRef50_A9F751 Possible LuxR family protein n=1 Tax=Phaeobacter... 115 1e-24 UniRef50_A8LK93 Putative regulatory protein n=1 Tax=Dinoroseobac... 113 6e-24 >UniRef50_P07026 Regulatory protein sdiA n=104 Tax=Enterobacteriaceae RepID=SDIA_ECOLI Length = 240 Score = 348 bits (892), Expect = 1e-94, Method: Composition-based stats. Identities = 240/240 (100%), Positives = 240/240 (100%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY Sbjct: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT Sbjct: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF Sbjct: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI Sbjct: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 >UniRef50_B5EJV5 Transcriptional regulator, LuxR family n=4 Tax=Acidithiobacillus ferrooxidans RepID=B5EJV5_ACIF5 Length = 237 Score = 261 bits (667), Expect = 1e-68, Method: Composition-based stats. Identities = 85/233 (36%), Positives = 125/233 (53%), Gaps = 1/233 (0%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWV 68 W+ +L FQ +E +V A++LE+DY + +R P+P RPK ++NYP W Sbjct: 4 WKEDLLQTFQSIECERQVLAMASEMARKLEFDYCAYGLRMPLPLVRPKTVLFSNYPAVWQ 63 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNR 128 + YQA+ + AIDP + S ++W+DDLF+ A+ LWE AR+ GLR G+ Sbjct: 64 ARYQAQEYQAIDPTVRHAMRSPSPVVWSDDLFAPARELWEEARSFGLRAGLAHTCRDAGG 123 Query: 129 ALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR-LNDEIVMTPEMNFSKREKEI 187 G L+ +R + LV+ ++++R + ++ + S RE E+ Sbjct: 124 MGGMLTLARAGETVTTAEWQAKACHILWLVQAVHLSMIRVIAPKLQPEIAVQLSCREVEV 183 Query: 188 LRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 LRWT EGKTS EIA IL+I+E TVNFH K+NA NKT AA GL+ Sbjct: 184 LRWTGEGKTSGEIANILNITERTVNFHISKAMAKLNAVNKTAAVLQAAMLGLL 236 >UniRef50_C8QEN4 Transcriptional regulator, LuxR family n=1 Tax=Pantoea sp. At-9b RepID=C8QEN4_9ENTR Length = 240 Score = 259 bits (661), Expect = 8e-68, Method: Composition-based stats. Identities = 108/240 (45%), Positives = 154/240 (64%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 M ++F WR ++FQ + ++ ++ + L +DY++ ++HPVPFTRP++ + Sbjct: 1 MTTDNYFVWRGETEIQFQAVTAVLQLKALLQKHIETLGFDYFAFLIQHPVPFTRPRIFLF 60 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120 + YPE WV +Y+++N+ A+DPVL + W DLF+ A LW A A+GL G + Sbjct: 61 STYPEDWVKHYESENYYAVDPVLLLCQRPGHGVEWTRDLFTGAGNLWAEANAYGLMSGFS 120 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 M NRA+G LS + + L EL++K+ L SL L RLND ++ +F Sbjct: 121 CSAMASNRAIGILSIASGQQSKTQHLRVELEVKLHFLAELSLRVLERLNDNAMVVLSNDF 180 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 S+RE EIL+WTAEGKTSAEI++IL+ISE+TVNFHQKNMQK+ N NKTQ+ACYAAA GLI Sbjct: 181 SQRELEILKWTAEGKTSAEISLILAISEHTVNFHQKNMQKRFNVSNKTQIACYAAAIGLI 240 >UniRef50_UPI00016A4E80 probable transcriptional activator of quorum sensing autoinducer synthesis transcription regulator protein n=1 Tax=Burkholderia oklahomensis EO147 RepID=UPI00016A4E80 Length = 236 Score = 255 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 78/229 (34%), Positives = 117/229 (51%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 +LL + T+ E++ +E ++L +D +S HP+PFT+P++ +NYPE W Y Sbjct: 7 DLLLSITQKSTSSEIFSSLEKYTRELGFDNFSYGFCHPIPFTKPRIVILSNYPERWRGRY 66 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALG 131 ++ IDP + SQ W++ S+ + W+ A AHGL G + ++ + LG Sbjct: 67 SELGYVNIDPTVLHGRNSQSPFTWSELPTSDVRSFWDEANAHGLVVGWAKSILDSDGGLG 126 Query: 132 FLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWT 191 L+ +R + L+M LL + M L + + S RE EILRW Sbjct: 127 MLTLARSNEELCGKELAAKNLRMCLLADLTHMVLSDAYRKEMTASADKLSAREVEILRWH 186 Query: 192 AEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 A+GKT+ EI ILSIS +TV FH KN K+ A NKT AA GL+ Sbjct: 187 ADGKTADEIGRILSISIDTVKFHTKNAVVKLGASNKTAAVARAAIMGLL 235 >UniRef50_B2I0W2 DNA-binding HTH domain-containing protein n=9 Tax=Acinetobacter RepID=B2I0W2_ACIBC Length = 238 Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 74/236 (31%), Positives = 114/236 (48%), Gaps = 3/236 (1%) Query: 8 SWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAW 67 SW+ +L F ++ +++ ++ A +L +DY + ++ P+ PK NYPEAW Sbjct: 3 SWQEDLLSAFLVVKNEYQLFDIVKSIASRLGFDYCAYGMQSPLSIAEPKTIMLNNYPEAW 62 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGLRRGVTQYLML 125 Y + ++ IDP + S L+W+ + WE AR++GL G Q Sbjct: 63 QKRYVEQQYVKIDPTVQHCMVSLQPLVWSSQSAKTQAEKDFWEEARSYGLNVGWAQSSRD 122 Query: 126 PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRL-NDEIVMTPEMNFSKRE 184 G L+ +R + + M L + ++ ++ ND + + RE Sbjct: 123 FIGTRGMLTLARSNDQLSEKEQKAQYTNMYWLTQTVHSSIAKIVNDVEFAKFNLYLTNRE 182 Query: 185 KEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 KE LRWTAEGKTSAEIA IL ++E TVNFH N +K+N NK A A GL+ Sbjct: 183 KEALRWTAEGKTSAEIAQILGVTERTVNFHLSNSMQKLNVNNKISAAIRAVMLGLL 238 >UniRef50_D2TD82 DNA-binding transcriptional activator SdiA n=2 Tax=Erwinia pyrifoliae RepID=D2TD82_ERWPY Length = 242 Score = 252 bits (643), Expect = 9e-66, Method: Composition-based stats. Identities = 108/240 (45%), Positives = 160/240 (66%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 M +D+F WR + +++ + IE Q ++LE D+YSL +RHPVPFTRPK Y Sbjct: 3 MTSEDYFIWRADIKSAYEKGGGIVHITRIIEQQLRELELDFYSLFIRHPVPFTRPKTFLY 62 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120 +NYPE W+ +Y ++F +DPVL +W+D+ S ++E AR +G+ G++ Sbjct: 63 SNYPEDWLEHYFREDFYQLDPVLKMCGSPGKIWLWDDEAISSGVRVFENARNYGIFHGLS 122 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 +M NR++G S S ++ + L+ ++LK+Q + S+ +L+++ND + T +++ Sbjct: 123 CSVMASNRSVGIFSMSTANSLKTIELTPVMELKIQYISELSMASLIKINDISMATTKLDL 182 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 S+RE EIL+WTAEGKTSAEI++ILSISENTVNFHQK MQK+ NAPNKTQ+A YAAA GLI Sbjct: 183 SQRELEILKWTAEGKTSAEISLILSISENTVNFHQKKMQKRFNAPNKTQIASYAAAIGLI 242 >UniRef50_C5D054 Transcriptional regulator, LuxR family n=1 Tax=Variovorax paradoxus S110 RepID=C5D054_VARPS Length = 235 Score = 252 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 77/234 (32%), Positives = 125/234 (53%), Gaps = 1/234 (0%) Query: 7 FSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEA 66 W + +L R +V ++ + A+QL +++ + +R VPFTRPK ++ Y E Sbjct: 2 NEWTQDVLGRLDEASEPSQVLAQVSVAARQLGFEHCAYGLRTLVPFTRPKTLMFSTYDER 61 Query: 67 WVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLP 126 W Y + +L +DP + S ++W++++F +A +W+ AR+ GLR G Q + P Sbjct: 62 WSRRYISAGYLQVDPTVAHGVHSGTPVIWSNEVFRDAPQMWDEARSFGLRVGWAQSVFEP 121 Query: 127 NRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKE 186 + +G LS +R S L Q LV ++ A RL + E +KR+ E Sbjct: 122 DARVGMLSLARSSEPLTAAEMRAKDLLFQGLVNKAHRAFCRLLGGPLAGIE-PLTKRQVE 180 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +LRWT +GKTS EIA IL IS+ TV+FH +N ++ A K+ A +A+ GL+ Sbjct: 181 VLRWTGDGKTSDEIAAILCISKPTVDFHLRNAMARLGASTKSSAAAFASRLGLL 234 >UniRef50_Q5EM19 ExpR n=2 Tax=Erwinia RepID=Q5EM19_ERWAM Length = 240 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 109/240 (45%), Positives = 164/240 (68%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 M +++F WR + +++ + + IE Q ++LE D+YSL +RHPVPFTRPK Y Sbjct: 1 MTSENYFIWRADIKSAYEKGSGTDHITRLIEQQLRELELDFYSLFIRHPVPFTRPKTFLY 60 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120 +NYP+ W+ +Y + F +DPVL + +W+D S ++E AR +G+ G++ Sbjct: 61 SNYPQDWLDHYWREGFYQLDPVLEMCSSPGKIWLWDDKTISAGLCVFEHARNYGIFHGLS 120 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 +M NR++G LS S +++++ L+ E +LK+Q ++ S+ AL+ +ND + T +++F Sbjct: 121 CSVMASNRSVGILSMSTANSQKLIKLTTETELKIQYVLELSMAALININDISMATTKLDF 180 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 S+RE EIL+WTAEGKTSAEI++ILSIS+NTVNFHQK MQK+ NAPNKTQ+A YAAA GLI Sbjct: 181 SERELEILKWTAEGKTSAEISLILSISQNTVNFHQKKMQKRFNAPNKTQIASYAAAVGLI 240 >UniRef50_A0MSL2 Transcriptional regulator n=8 Tax=Burkholderia cepacia complex RepID=A0MSL2_BURVI Length = 237 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 72/234 (30%), Positives = 115/234 (49%), Gaps = 1/234 (0%) Query: 8 SWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAW 67 +WR L F ++ +V+ E + L +D+ S +R P+P ++P+ +NYP+ W Sbjct: 3 AWREKYLNGFATAKSEADVFLEFSADVRALGFDHCSFGLRIPLPISKPQFMLQSNYPQTW 62 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPN 127 V Y ++N+ A+DP + L+W D ++ WE A HGLR G + Sbjct: 63 VERYVSQNYFAVDPTVRHGLSRMSPLIWRADSQTQCVQFWEEADQHGLRHGWCMPSVSRT 122 Query: 128 RALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMAL-MRLNDEIVMTPEMNFSKREKE 186 A+G ++ R E +M L + A+ M L +V + + RE+E Sbjct: 123 GAIGLITMVRSGEPIEERELAEKGYQMSWLANTANYAMSMHLLQRLVPEYTVELTVRERE 182 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L+W+A GKT AEI I+ + + TV FH N +K+NA NKT+ A A GL+ Sbjct: 183 ALQWSAAGKTYAEIGKIMHVDDRTVKFHLVNAMRKLNAANKTEAAVKATMLGLL 236 >UniRef50_P54292 Regulatory protein rhlR n=12 Tax=Bacteria RepID=RHLR_PSEAE Length = 241 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 97/239 (40%), Positives = 144/239 (60%) Query: 2 QDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYT 61 D F W + Q + ++ V+ +E + ++L +DYY+ VRH +PFTRPK + Sbjct: 3 NDGGFLLWWDGLRSEMQPIHDSQGVFAVLEKEVRRLGFDYYAYGVRHTIPFTRPKTEVHG 62 Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQ 121 YP+AW+ YQ +N+ A+DP + S ++W+D LF +++ LW AR GL G T Sbjct: 63 TYPKAWLERYQMQNYGAVDPAILNGLRSSEMVVWSDSLFDQSRMLWNEARDWGLCVGATL 122 Query: 122 YLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFS 181 + PN L LS +R +E++L+++ ++ L L ++M+ + S Sbjct: 123 PIRAPNNLLSVLSVARDQQNISSFEREEIRLRLRCMIELLTQKLTDLEHPMLMSNPVCLS 182 Query: 182 KREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 RE+EIL+WTA+GK+S EIA+ILSISE+TVNFH KN+QKK +APNKT A YAAA GLI Sbjct: 183 HREREILQWTADGKSSGEIAIILSISESTVNFHHKNIQKKFDAPNKTLAAAYAAALGLI 241 >UniRef50_Q2SXK0 Autoinducer-binding transcriptional regulator, LuxR family n=31 Tax=Burkholderiaceae RepID=Q2SXK0_BURTA Length = 241 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 79/234 (33%), Positives = 124/234 (52%), Gaps = 1/234 (0%) Query: 8 SWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAW 67 +W +L + +E + IE A L+++Y + +R P P +RP++ +N+PE W Sbjct: 7 NWAEDLLAGLDSARSEDEAFRSIETAATALDFEYCAYGLRVPWPLSRPRIETRSNFPEQW 66 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPN 127 Y FL +DP+L SQ ++ N+ LF+ + +W A++ GLR G Q Sbjct: 67 KRRYVEAGFLDVDPILAHGRRSQQPVVLNETLFASSHQMWVEAQSFGLRFGWAQSSFDAY 126 Query: 128 RALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLN-DEIVMTPEMNFSKREKE 186 +G L+ R D + +M+ LVR + AL R+ +++ PE ++RE E Sbjct: 127 GGMGMLALVRSREPVTHAELDAKEYRMRWLVRTAHAALGRMMLPKLMADPERGLTEREVE 186 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +L+W A+GKTS EI+ IL+IS +TVNFH KN K+ NKT AA GL+ Sbjct: 187 VLKWAADGKTSGEISKILAISVDTVNFHVKNAILKLRTANKTAAVVRAAMLGLL 240 >UniRef50_B1Z3D8 Transcriptional regulator, LuxR family n=4 Tax=Burkholderia ambifaria RepID=B1Z3D8_BURA4 Length = 228 Score = 237 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 72/228 (31%), Positives = 117/228 (51%), Gaps = 2/228 (0%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQA 73 + R + ++V+ + QA+ L+++ + R P+P TRP YPE+W Y Sbjct: 1 MTTLSRALSFDDVFEIVAAQARALDFEMCAYGARDPLPVTRPTFRTRNTYPESWQQRYIE 60 Query: 74 KNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFL 133 N+ A DPV+ L+W D ++ + WE A+AHG+ G +Q + + + Sbjct: 61 GNYFARDPVVRYGLIYTSPLVWPVDACAD-ESFWEEAKAHGVAHGWSQPIRDKHGRIAMW 119 Query: 134 SFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMN-FSKREKEILRWTA 192 S +R + + + ++ L + RL D +M F+ REKE+L+W A Sbjct: 120 SVARSADPISDLELAATESRLIYLAHAAHAVNSRLVDAPAAAMQMGPFTTREKEVLKWAA 179 Query: 193 EGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +GKT+ EIA ILSISE T+ FH +N+ +K+N+ NKTQ A G+I Sbjct: 180 DGKTALEIASILSISERTITFHMQNIMEKLNSVNKTQAIVKAVLLGII 227 >UniRef50_P58590 Transcriptional activator protein solR n=8 Tax=Burkholderiaceae RepID=SOLR1_RALSO Length = 236 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 76/231 (32%), Positives = 112/231 (48%), Gaps = 1/231 (0%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 + F + +++ +I +QL +DY +R P+P ++P VA + YP W+ + Sbjct: 6 QDAYHAFHTAQDERQLFRQIASVVRQLGFDYCCYGIRVPLPVSKPAVAIFDTYPAGWMEH 65 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRAL 130 YQA FL IDP + S ++W + EA LW AR GL GV + + A Sbjct: 66 YQASGFLEIDPTVRTGASSSDLIIWPVSIRDEAARLWSDARDFGLNIGVARSSWTAHGAF 125 Query: 131 GFLSFSRCSAREIPILSDELQLKMQLLVRESLMALM-RLNDEIVMTPEMNFSKREKEILR 189 G L+ +R + ++L L + + L ++V + RE+E+L Sbjct: 126 GLLTLARRADPLTAAELEQLSATTNWLANLAHALMSPFLMPKLVPESSAALTAREREVLC 185 Query: 190 WTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 WT EGKT+ EI IL ISE TVNFH N+ K+ A NK Q A A GLI Sbjct: 186 WTGEGKTAYEIGQILRISERTVNFHVNNVLLKLAATNKVQAVVKAIAIGLI 236 >UniRef50_D0KZC8 Transcriptional regulator, LuxR family n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZC8_HALNC Length = 237 Score = 233 bits (594), Expect = 4e-60, Method: Composition-based stats. Identities = 71/233 (30%), Positives = 119/233 (51%), Gaps = 1/233 (0%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWV 68 W+ ++ + Q E E + +IE +A L ++ + +R + T KV NY + W Sbjct: 4 WQGDLVSQIQSAENEESAFKKIEDEALALGFENAAYGLRLNLNITNQKVVMMNNYSQNWK 63 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNR 128 Y +N+++IDPV+ N S ++W+ + +E + WE A +H L+ G +Q Sbjct: 64 RRYTDENYISIDPVVKHGNKSLMPVVWSSNKITENKNFWEDAYSHNLKYGWSQASADQVG 123 Query: 129 ALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR-LNDEIVMTPEMNFSKREKEI 187 G L+ +R + ELQ ++ L + S + + + + + + REK++ Sbjct: 124 RRGLLTLTRGHEPISELELKELQYRLTWLTQISHHCMSEIITTKKMPETMITLTMREKDV 183 Query: 188 LRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 LRWTA GKTS E + I++I+E TVNFH N +K+N NKT AA GL+ Sbjct: 184 LRWTAAGKTSGETSTIMNITERTVNFHIANSMQKLNCINKTSATVRAAMLGLL 236 >UniRef50_B7VAX6 Quorum-sensing control repressor n=7 Tax=Pseudomonas aeruginosa RepID=B7VAX6_PSEA8 Length = 237 Score = 232 bits (592), Expect = 7e-60, Method: Composition-based stats. Identities = 72/232 (31%), Positives = 108/232 (46%), Gaps = 1/232 (0%) Query: 10 RRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVS 69 R L R+ T EE + + ++++S R P P T PK F +NYP W S Sbjct: 5 REGYLEILSRITTEEEFFSLVLEICGNYGFEFFSFGARAPFPLTAPKYHFLSNYPGEWKS 64 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRA 129 Y ++++ +IDP++ L+WN + F E + WE A HG+R G + + Sbjct: 65 RYISEDYTSIDPIVRHGLLEYTPLIWNGEDFQENRFFWEEALHHGIRHGWSIPVRGKYGL 124 Query: 130 LGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR-LNDEIVMTPEMNFSKREKEIL 188 + LS R S E + + + L IV + + RE E+L Sbjct: 125 ISMLSLVRSSESIAATEILEKESFLLWITSMLQATFGDLLAPRIVPESNVRLTARETEML 184 Query: 189 RWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +WTA GKT EI +ILSI + TV FH N +K+N+ NK + A A GL+ Sbjct: 185 KWTAVGKTYGEIGLILSIDQRTVKFHIVNAMRKLNSSNKAEATMKAYAIGLL 236 >UniRef50_A1KWS2 Quorum sensing LuxR family sensor regulator n=3 Tax=Burkholderia RepID=A1KWS2_BURGL Length = 349 Score = 232 bits (592), Expect = 7e-60, Method: Composition-based stats. Identities = 70/226 (30%), Positives = 117/226 (51%), Gaps = 1/226 (0%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWV 68 + +F E ++++H++ +++L ++Y +R P P ++P V + YP W+ Sbjct: 4 RWQDAYHQFNTAENEQQLFHQVSAYSKRLGFEYCCYGIRVPQPGSQPLVEIFDTYPPGWM 63 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNR 128 ++YQA+N++ IDP + S ++W D +E LW AR G+ GV Q Sbjct: 64 AHYQARNYIEIDPTVRDGAASPNMIIWPDADAAEQPSLWRDARDFGMSVGVAQSSWAARG 123 Query: 129 ALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR-LNDEIVMTPEMNFSKREKEI 187 G L+ +R S R P + L L+ L S + R L ++ ++ +KRE+E+ Sbjct: 124 VFGLLTIARRSDRLTPAEINSLTLQANWLANLSHSLMGRFLVPKLSPAASISLTKREREV 183 Query: 188 LRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 L WT+EG+T++EI L+ISE TV FH N+ K+ A NK Q Sbjct: 184 LSWTSEGRTASEIGEQLNISERTVTFHINNILAKLGAANKVQAVGR 229 >UniRef50_A9JPW9 PmrR protein n=1 Tax=Pseudomonas sp. RW10S2 RepID=A9JPW9_9PSED Length = 236 Score = 232 bits (592), Expect = 9e-60, Method: Composition-based stats. Identities = 66/216 (30%), Positives = 110/216 (50%), Gaps = 1/216 (0%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWV 68 W ML + + E++ A+ L +DY + +R P+P T+P++ +NY W Sbjct: 3 WMGDMLSAVYDARDTQTLLEEVKAAARHLGFDYCAYGLRTPLPVTKPRIFMLSNYSRPWC 62 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNR 128 +Y A +L +DP + S ++W D++F++A LW+ AR GLR G Q + ++ Sbjct: 63 DHYHANGYLLLDPTVRHCQRSMQPVVWGDEIFADAPQLWDEARQAGLRHGWAQSCLEGSK 122 Query: 129 ALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR-LNDEIVMTPEMNFSKREKEI 187 G L+ +R + +M+ L + R L+D P+ S+RE+E+ Sbjct: 123 GGGMLTLARSGEGIGEGELRAHETRMRWLANVAHQGFSRLLSDSWQPQPQSPLSEREREV 182 Query: 188 LRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKIN 223 LRW A+GKT E+A IL++S TV FH +N K+ Sbjct: 183 LRWAADGKTLNEVADILTLSIETVKFHTRNAGAKLG 218 >UniRef50_A4JSV0 Transcriptional regulator, LuxR family n=2 Tax=Burkholderia cepacia complex RepID=A4JSV0_BURVG Length = 239 Score = 232 bits (592), Expect = 9e-60, Method: Composition-based stats. Identities = 75/233 (32%), Positives = 116/233 (49%), Gaps = 2/233 (0%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWV 68 WR ++L ++ ETA + + + + L ++Y++ +R +P TRP + N+P+AW Sbjct: 4 WRESLLASMEQAETASDAFDGLAPAVRALGFEYHAYVLRVTIPITRPASMEWNNFPQAWR 63 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNR 128 ++Y K + DPVL+ + W L + W A GLR G +Q L Sbjct: 64 AHYAQKRYQHADPVLHYGQACTRPMPWPGPL-AGHDAFWRDAADFGLRHGWSQTLRDHRG 122 Query: 129 ALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRL-NDEIVMTPEMNFSKREKEI 187 A+G S R P + +M L + + L +++ + M S REKE+ Sbjct: 123 AMGTFSLVRGGPPISPEELRRTEPEMIWLCQFVHATMSNLIVSDVMPSGAMRLSLREKEV 182 Query: 188 LRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L WTAEGKT+AE+A IL ++E V FH +N K++A NKT AA GLI Sbjct: 183 LHWTAEGKTAAEVAAILQLTERNVGFHIQNAMDKLDATNKTHATVKAAMLGLI 235 >UniRef50_Q2Y6B5 Transcriptional regulator, LuxR family n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6B5_NITMU Length = 244 Score = 232 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 62/234 (26%), Positives = 105/234 (44%), Gaps = 5/234 (2%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 T+ ++ EE++ A+ + ++++ V+ TRP + YPE W +Y Sbjct: 5 TLFESLLNCDSVEELHSATTTIARAMGFEHFLYGVQVNTSLTRPYRFILSCYPEEWRKHY 64 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQP--LWEAARAHGLRRGVTQYLMLPNRA 129 + + DP ++ + ++W ++F + + A+ GL G + + Sbjct: 65 DKEGYANFDPTVSHCARTSIPIIWKKEIFKGRRETRVRNEAKDCGLVSGASFSVHGGRGE 124 Query: 130 LGFLSFSRC-SAREIPILSDELQLKMQLLVRESLMALMR--LNDEIVMTPEMNFSKREKE 186 LS + +RE K QLL A+ R L+ + + N ++RE+E Sbjct: 125 AAMLSLATSRESREAQNDILATMAKAQLLTCYLHEAVQRIVLSKGPLPVKKANLTEREQE 184 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L W AEGKT EIA I+ ISE TV FH +N +K+ N+ Q A + GLI Sbjct: 185 CLLWAAEGKTGWEIANIVKISERTVTFHLQNAIQKLGVVNRQQAISRALSMGLI 238 >UniRef50_A4BB65 LuxR, transcriptional regulator n=1 Tax=Reinekea blandensis MED297 RepID=A4BB65_9GAMM Length = 240 Score = 228 bits (583), Expect = 9e-59, Method: Composition-based stats. Identities = 64/235 (27%), Positives = 98/235 (41%), Gaps = 6/235 (2%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 +L R Q+ ++ E+ +E +Q +E+DY+ + P T + Y NYP W Y Sbjct: 2 DLLERLQQAQSTSELPEILESISQVVEFDYFLFGLALPNSITHSDILMYDNYPGEWRRVY 61 Query: 72 QAKNFLAIDPVLNPENFSQGHLMW-----NDDLFSEAQPLWEAARAHGLRRGVTQYLMLP 126 + DP++ + + W + + A A GL+ G + + Sbjct: 62 DESGYAKRDPIVQYSISNYMPVTWAQISESPSYSRSDLKIMWEAEASGLKAGFSLPIHGA 121 Query: 127 NRALGFLSFSRCSAREIPILS-DELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREK 185 G +SF+ + L E +Q+LV A+ RL P +KRE Sbjct: 122 VGEFGMISFASNHNTDEQRLKYAEAIPVIQMLVPAIQDAVKRLRVSESKEPPAKLTKREI 181 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E L W EGK+S EI+ IL SE T FH N K+ A N+ Q A G+I Sbjct: 182 ECLTWATEGKSSWEISQILGCSERTAIFHLSNAANKLGATNRYQAISKALLCGII 236 >UniRef50_UPI00016A49A6 transcriptional regulator, LuxR family protein n=1 Tax=Burkholderia oklahomensis C6786 RepID=UPI00016A49A6 Length = 238 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 64/236 (27%), Positives = 105/236 (44%), Gaps = 6/236 (2%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 + +L + +T +++ + A +L +DY+ + V +NYP AW Sbjct: 3 QDILDQTSSAKTERDIHDILSRIAARLGFDYFFYGTLSDMRKPENPVKTVSNYPMAWQEK 62 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWNDDLF--SEAQPLWEAARAHGLRRGVTQYLMLPNR 128 Y++ ++ IDPV+ L WND + E + E AR HGL G + + + Sbjct: 63 YKSSGYIRIDPVVRHCGHRLIPLQWNDGICHCREQRNFMEDARGHGLVAGASFPVHSRHG 122 Query: 129 ALGFLSFSRCSAREIPILSDELQLKM----QLLVRESLMALMRLNDEIVMTPEMNFSKRE 184 + LS + SA LS + L + R+++ P + RE Sbjct: 123 EVSILSLASRSAGGTTSLSAKHAPATFAQGALAAAFVREGMERISNRPDHEPSAPLTHRE 182 Query: 185 KEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E L+W A GK+S EIAMIL ISEN V +H K + K + ++ A A+G++ Sbjct: 183 LECLKWIAAGKSSWEIAMILGISENGVLYHVKKLMAKFDVQSRHLAVLKAMASGVV 238 >UniRef50_D0B4P5 Transcriptional activator n=39 Tax=Brucellaceae RepID=D0B4P5_BRUME Length = 238 Score = 227 bits (579), Expect = 2e-58, Method: Composition-based stats. Identities = 69/233 (29%), Positives = 116/233 (49%), Gaps = 2/233 (0%) Query: 10 RRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVS 69 T Q ++A++++ ++ A L ++Y S + P K + +P+ W Sbjct: 6 WETFYDAMQSADSADQLFEIVKNYAHDLGFEYVSYVMSIPSLNGSLKWVRFGAFPDGWEQ 65 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRA 129 Y A+N+ IDP+L S L+W+ + F+ A +W A +GL+ G++Q Sbjct: 66 RYLAQNYAEIDPLLRRGVNSIDPLIWSQNFFASAPQIWADAVKYGLKVGISQPCWAAQGV 125 Query: 130 LGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTP--EMNFSKREKEI 187 G LSF R P L+ ++Q++ +++ D ++ +++ + RE+EI Sbjct: 126 FGLLSFVRSGPALTPGEISMLRRQLQMVTNLLHLSMYERVDVPAISCIGDVSLTLREREI 185 Query: 188 LRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 LRWT+EGKT+ I IL+IS TVNFH N+ K+ A NK Q A GL+ Sbjct: 186 LRWTSEGKTAEIIGTILNISTRTVNFHISNVLTKLVAVNKVQAVAKARTFGLL 238 >UniRef50_Q51786 Transcriptional activator protein phzR n=6 Tax=Pseudomonas RepID=PHZR_PSEFL Length = 244 Score = 226 bits (576), Expect = 6e-58, Method: Composition-based stats. Identities = 75/241 (31%), Positives = 115/241 (47%), Gaps = 1/241 (0%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 M+ W F + EE ++L +D+++ + PF RPK Y Sbjct: 4 MELGQLLGWDAYFYSIFAQAMNMEEFTVVALRALRELRFDFFAYGMCSVTPFMRPKTYMY 63 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120 NYPE W+ YQA N+ IDP + S ++W+++LF LW A L G+ Sbjct: 64 GNYPEHWLQRYQAANYALIDPTVKHSKVSSAPILWSNELFRNCPDLWSEANDSSLCHGLA 123 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLN-DEIVMTPEMN 179 Q +G LS +R + L+ + +L + L D ++ Sbjct: 124 QPSFNTQGRVGVLSLARKDNAISLQEFEALKPVTKAFAAAALEKISALETDVRAFNTDVE 183 Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 FS+RE ++LRWTA+GKTS EI +I+ + +TVN+H +N+Q+KI A N+ Q YA A G Sbjct: 184 FSERECDVLRWTADGKTSEEIGVIMGVCTDTVNYHHRNIQRKIGASNRVQAVSYAVALGY 243 Query: 240 I 240 I Sbjct: 244 I 244 >UniRef50_Q0B318 Transcriptional regulator, LuxR family n=3 Tax=Burkholderia RepID=Q0B318_BURCM Length = 237 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 74/234 (31%), Positives = 125/234 (53%), Gaps = 1/234 (0%) Query: 8 SWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAW 67 +W +L + + E + +I +++ ++Y + C++ P P +R KV ++N+PE W Sbjct: 3 NWMEQILYEIEATHSEHEAFGKIASAVKEIGFEYSAYCLQTPWPLSRRKVLVFSNFPEPW 62 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPN 127 Y ++ +DP+L S ++W+D +F LWE A+AHGLR G + + Sbjct: 63 QRRYHDARYIDVDPLLRRGRQSYAPVIWSDAVFEGTPQLWEEAQAHGLRYGYSLAAVSNC 122 Query: 128 RALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR-LNDEIVMTPEMNFSKREKE 186 G +S +R + +LKM+ LV + +A+ R + ++ ++ + RE E Sbjct: 123 GVSGMMSMARSHTPLTVRELQQQELKMRWLVNAAHLAITRAVLPKLSPEGDIELTDREVE 182 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +L+W A+GKT+AEI+MI+ IS TVNFH KN K+N N T AA GL+ Sbjct: 183 VLKWVADGKTAAEISMIMLISVYTVNFHVKNAVTKLNTSNATAAVARAAMLGLL 236 >UniRef50_C4I3H7 Autoinducer-binding transcriptional regulator, LuxR family n=22 Tax=Burkholderia RepID=C4I3H7_BURPS Length = 236 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 68/240 (28%), Positives = 109/240 (45%), Gaps = 4/240 (1%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 M+ DF + L F R E + V + A L Y+Y + +R P P + P + Sbjct: 1 MEMHDFLQFW---LNEFSRSENPQHVISVLTRAAATLGYEYAAYGMRRPFPISNPPILMV 57 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120 +NYP W Y F ID + S + W+ + W A + G+ G + Sbjct: 58 SNYPARWQERYIEARFANIDGAVKAALGSDRPVTWSAPANASKSAFWAEALSFGIAHGWS 117 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 + A+G L+ SR + + L + ++ + + Sbjct: 118 SASRGADGAIGVLTLSRTQDPIDTAEKFRNESIVHWLANVAHASMAPFLP-AADEFDPDL 176 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 ++RE ++L+WTA+GKT+ EIA+ILSISE+TVNFH KN+ K+ + NK Q AA G++ Sbjct: 177 TRRETDVLKWTADGKTAYEIALILSISESTVNFHVKNIVSKLGSTNKIQAVAKAALMGML 236 >UniRef50_Q88E21 Transcriptional regulator, LuxR family n=7 Tax=Pseudomonas RepID=Q88E21_PSEPK Length = 279 Score = 223 bits (569), Expect = 4e-57, Method: Composition-based stats. Identities = 73/234 (31%), Positives = 115/234 (49%) Query: 7 FSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEA 66 W+ L F + ++++ AQ L+ DY L +R + P++ Y+NYP Sbjct: 46 LHWKPEYLRAFVSERSPQKLFDIAVHLAQDLDMDYLGLNIRIQIATQTPRLYLYSNYPSE 105 Query: 67 WVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLP 126 W+ YQ +F DP N + S ++W D+L+ EA E A +GLR G TQ L Sbjct: 106 WIERYQRDDFYKQDPAANLSHSSTMPVLWTDELYKEAPQFREMACLYGLRHGWTQSLHDQ 165 Query: 127 NRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKE 186 +S +R + + + +Q L L + + P+ S+RE E Sbjct: 166 QHNESQISVARPNGPIDEVELYDKAGSVQWLCHTLHAVLGEHHLNALCPPQPKMSERELE 225 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +L+W+A GKT+A++A ILS+S++TVNFH +++ K NA NK AA G I Sbjct: 226 VLKWSAAGKTAADVASILSLSQSTVNFHIRSVITKTNAANKAGAIAIAALRGWI 279 >UniRef50_P74946 Transcriptional activator protein vanR n=3 Tax=Vibrionaceae RepID=VANR_VIBAN Length = 240 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 49/230 (21%), Positives = 99/230 (43%), Gaps = 2/230 (0%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQ 72 ++ Q++ + +++ + + + ++++ + + NYP +W Y Sbjct: 7 LIQENQQITSHDDLENVLNGLNNLIGHEFFLFGLSFQPTLKTSETLVTDNYPNSWRQQYD 66 Query: 73 AKNFLAIDPVLNPENFSQGHLMWNDD--LFSEAQPLWEAARAHGLRRGVTQYLMLPNRAL 130 F+ IDP++ + + W+D + ++ + ++E AR +GL+ G + + Sbjct: 67 ESGFMHIDPIVKYSITNFLPIRWDDAKRVNNDGRVIFEEARCNGLKAGFSIPIHGLRGEF 126 Query: 131 GFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRW 190 G +SF+ + + + ++ + P + RE + L W Sbjct: 127 GMISFATSDTKSYDLNQQSIHTSQLIVPLLAHNIGNITRYHKDAKPRAVLTAREVQCLAW 186 Query: 191 TAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 AEGK++ EIA I++ SE TV FH N KK+ A N+ Q A G I Sbjct: 187 AAEGKSAWEIATIINTSERTVKFHFSNACKKLGATNRYQAITKAILGGYI 236 >UniRef50_C3K2E5 Putative LuxR-family regulatory protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K2E5_PSEFS Length = 236 Score = 220 bits (560), Expect = 4e-56, Method: Composition-based stats. Identities = 62/234 (26%), Positives = 99/234 (42%), Gaps = 1/234 (0%) Query: 7 FSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEA 66 +WR T L + + V+ + Q +L + Y S + V + +TNYP+ Sbjct: 2 LNWRNTRLPKLEGENEITSVFEMVINQTYELGFQYCSFKMSSQVSENQTNPIEFTNYPKE 61 Query: 67 WVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLP 126 W + Y + +DPV+ ++W LF +A LW A+ + TQ + Sbjct: 62 WTTVYNQARYFDVDPVVKHCKRCVLPVVWEGTLFKDAPSLWSLAQTLNVNVAWTQAVHDF 121 Query: 127 NRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLM-ALMRLNDEIVMTPEMNFSKREK 185 L+ SR + P+ E + L + + P + RE Sbjct: 122 QGVFSMLTLSRGTDDVSPVELYEKAGHVLWLCHAMHAVVAQKYAGKPSALPPSKLTPRET 181 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 EIL+W+A GKT+++IA IL +SE TV FH + KK+ NK A+ GL Sbjct: 182 EILKWSAMGKTASDIATILCLSERTVGFHISSTFKKLGVNNKIAAVLCASKAGL 235 >UniRef50_C5ANM9 DNA-binding HTH domain-containing protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5ANM9_BURGB Length = 235 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 1/221 (0%) Query: 21 ETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAID 80 +++ V+ ++ A QL +DY R P+P V + NYP W+ +Y+ ++ +D Sbjct: 15 DSSRVVFDKLVGYASQLGFDYCCYGFRSPLPVGGESVKVFDNYPNGWMEHYRHMGYIDVD 74 Query: 81 PVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSA 140 P + + W S+ W+ AR HGL+ G+ Q A G LS +R Sbjct: 75 PTVEKAMTCSQTICWPGFDESKQSAFWQDARDHGLKVGIAQPSWSARGAFGLLSLARGEG 134 Query: 141 REIPILSDELQLKMQLLVRESLMAL-MRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAE 199 L L++ + A+ + D + + ++ ++RE+++LRWT EG + + Sbjct: 135 EIDGHELKRLSLQLSWITNAVHSAMTAHVFDSLGLGAAISLTERERQVLRWTVEGLNAFD 194 Query: 200 IAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 I+ L+IS +TVN+H + K A NK Q A A A L+ Sbjct: 195 ISEKLNISVSTVNWHIGKVLAKFGATNKVQAAARAVALNLL 235 >UniRef50_A0KHA7 Transcriptional activator protein AhyR/asaR n=2 Tax=Aeromonas hydrophila RepID=A0KHA7_AERHH Length = 264 Score = 217 bits (552), Expect = 3e-55, Method: Composition-based stats. Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 8/235 (3%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 ++ +F+ + + + ++ +DY+ L + P RP V + P+AWV Y Sbjct: 16 DLIAQFETAADERTIVTLLRELSGRMGFDYFRLALIFPSTIQRPDVIIFNGCPQAWVDTY 75 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQ------PLWEAARAHGLRRGVTQYLML 125 + F AIDP++ ++W D + E + + + A +G+ G+T Sbjct: 76 TSSGFFAIDPIVKCAMTKSTPILWADVVNDEERCDEQGREMMQLANEYGICDGITLPWHG 135 Query: 126 PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREK 185 N +G LSF + R + + L A+ R+ ++P S RE Sbjct: 136 ANGHVGLLSFITSTPRTQQQWLSAV-PFISWLSMHIFEAVARV-CLAGLSPHDALSLREL 193 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E+ RW AEGK ++IA IL I+ TV FH N+ K+ A +K+Q +A G++ Sbjct: 194 EVCRWAAEGKQVSDIAQILGITPRTVTFHLNNVVSKLGASSKSQAISWALKQGMV 248 >UniRef50_A4U2E2 Regulatory protein, LuxR:Autoinducer-binding n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U2E2_9PROT Length = 242 Score = 215 bits (549), Expect = 9e-55, Method: Composition-based stats. Identities = 64/245 (26%), Positives = 106/245 (43%), Gaps = 10/245 (4%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYS---LCVRHPVPFTRPKV 57 M +F + R R +TA + E++ + + + Sbjct: 1 MVGDNF--RLGDFIERTLRADTAPALMSELKSALVHWGFPHMACGAFGEPERPLDDMSVP 58 Query: 58 AFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND--DLFSEAQPLWEAARAHGL 115 A +YPE W YY KN++ IDPV+ + W+ DL + + +++ A GL Sbjct: 59 AVVVDYPEEWQKYYFEKNYVTIDPVITRACQAYVPYRWDQLRDLTNPQKRMFKEATEAGL 118 Query: 116 RRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT 175 R G+T + PN ++ S + I +LV + L+ + + Sbjct: 119 RHGITVPVHGPNGSIFVASVASP---HTDIDHLRSLSVANVLVTQVYSVLVGMRHPGAPS 175 Query: 176 PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 ++ + RE+E L W+A GK+S +I +IL+IS+NTVNFH KN K+ A + A Sbjct: 176 APVSLTARERECLIWSARGKSSWDIGVILNISDNTVNFHLKNAMGKLKASTRVLAIVKAI 235 Query: 236 ATGLI 240 GLI Sbjct: 236 RMGLI 240 >UniRef50_Q3Y8H6 PpuR n=3 Tax=Pseudomonas putida RepID=Q3Y8H6_PSEPU Length = 238 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 65/231 (28%), Positives = 114/231 (49%), Gaps = 3/231 (1%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 LLR ME E+ +++ ++L Y + + ++ +V Y++YP+AW + Y Sbjct: 7 DELLRLSEMERFEDWLAHLKILTRKLGYSNFLIGLKPAPTDANQQVLIYSDYPDAWRTRY 66 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWNDD--LFSEAQPLWEAARAHGLRRGVTQYLMLPNRA 129 A+++ A+DPV+ + L+W+ D +E A AHGL++G+ L P Sbjct: 67 DAESYAAVDPVVQHCLNANRPLLWDRDNYRRPSESEFFEEAAAHGLQQGLALPLHGPRGE 126 Query: 130 LGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILR 189 G L + + L M L+R+ M M L I + ++ + REKE+L+ Sbjct: 127 AGMLCLKPFESGPRATATMIESLPMATLLRDYAMEGM-LKARIECSTPVHLTSREKEVLQ 185 Query: 190 WTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 W+A GKT+ EI+MILS + + ++FH KN+++K ++ A I Sbjct: 186 WSAAGKTTWEISMILSCTTSAIDFHFKNIRRKFQVSSRQMAVLKAIQQKSI 236 >UniRef50_Q2T3H4 Autoinducer-binding transcriptional regulator, LuxR family n=29 Tax=pseudomallei group RepID=Q2T3H4_BURTA Length = 425 Score = 209 bits (532), Expect = 6e-53, Method: Composition-based stats. Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 9/234 (3%) Query: 14 LLRFQRMETAE---EVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 + F + +A ++ + +QL + ++ RH + +P W Sbjct: 194 IGSFNEILSATCKKSLFEQTAYHVRQLGFKNFAY--RHQISGAASSRCMLDGFPTEWRLR 251 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWNDDLFS--EAQPLWEAARAHGLRRGVTQYLMLPNR 128 Y A ++L+IDPV+ L+W+D+L++ A+ + + A+++GL G++ + + Sbjct: 252 YDAADYLSIDPVVQHCRCRTVPLIWHDELYTTGRAKLMRDEAKSYGLVYGLSCPVHDRSG 311 Query: 129 ALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR--LNDEIVMTPEMNFSKREKE 186 A+ LS + E L + L+ + A M L+ + + + RE+E Sbjct: 312 AISMLSMATDDPFEHDANDILRLLSLSQLLASFVHAAMHELLDCRLRRQGSCDLTARERE 371 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L+W GKT+ EI+ IL ISE TV FH N +KI A N+ Q A+A GLI Sbjct: 372 SLQWAGRGKTAWEISKILGISERTVVFHLSNAARKIGANNRAQAVVIASARGLI 425 >UniRef50_Q9AH79 MupR n=2 Tax=Pseudomonas fluorescens RepID=Q9AH79_PSEFL Length = 234 Score = 208 bits (531), Expect = 9e-53, Method: Composition-based stats. Identities = 58/225 (25%), Positives = 96/225 (42%), Gaps = 4/225 (1%) Query: 20 METAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAI 79 ET E + A++ + V+ + +NY +W S Y A + + Sbjct: 8 CETLEAWSKVLFALAKEYGFSSVLFGVKPTISTPFSSSTIISNYSRSWRSIYDANAYYEV 67 Query: 80 DPVLNPENFSQGHLMWNDDLF--SEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSR 137 DPV+ S L+W + F Q L+EAA A G+ G+ + P G L+F Sbjct: 68 DPVVFHCLNSSLPLVWTKENFINKPEQQLYEAASASGVCSGLCMPIHGPRGEFGMLNFIT 127 Query: 138 CSAREIPILSDELQLKMQLLVRESLMALMRL--NDEIVMTPEMNFSKREKEILRWTAEGK 195 ++ + + L+ + + ++ E + + RE E L+W A GK Sbjct: 128 DEKSPADVIRSKGLPQFALMRDYLIESFQKIQSAAEKEVEKPPKLTARELECLKWVAAGK 187 Query: 196 TSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 TS EI+ ILS +E TVN+H N +K NA ++ +GL+ Sbjct: 188 TSWEISRILSCAEVTVNYHVTNFMRKFNAESRQHAVISGIRSGLV 232 >UniRef50_A0AX00 Transcriptional regulator, LuxR family n=6 Tax=Burkholderia RepID=A0AX00_BURCH Length = 237 Score = 208 bits (529), Expect = 1e-52, Method: Composition-based stats. Identities = 66/225 (29%), Positives = 96/225 (42%) Query: 16 RFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKN 75 QR TAE + I A L + Y +R +P RP + N+P W Y Sbjct: 12 ALQRAPTAEAAFPPIAAAAAALGFRYCVYGLRRTLPLARPDLQIVGNHPREWEHRYVKFG 71 Query: 76 FLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSF 135 ++ IDP++ ++WN W A G+R G + LG L+ Sbjct: 72 YVTIDPIIKRVASQPRPVVWNAFDEPGDTAFWHDAACFGMRYGWSHGGYDRAGNLGVLTL 131 Query: 136 SRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGK 195 R + L+ L + LM + + + RE+E+L WTA+GK Sbjct: 132 VRDTTPLDADEISRLRAPCASLAHAAHAYLMPRLADPIAPVGTGLTLREREVLAWTADGK 191 Query: 196 TSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 T+ EI MI I+E TV FH +N K++A NKT A AA GL+ Sbjct: 192 TAYEIGMIFGIAERTVKFHLQNAVVKLDAMNKTHAATKAAMLGLL 236 >UniRef50_B6R6S8 Transcriptional regulator, LuxR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R6S8_9RHOB Length = 239 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 51/234 (21%), Positives = 94/234 (40%), Gaps = 9/234 (3%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 + ET + V I Q + + L + + + W Y Sbjct: 9 EFVESINNEETPDGVSKRIAELGQSFGFTSFCLAAIPEAGASFDGSIMLSGWRPEWQQRY 68 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWN-----DDLFSEAQPLWEAARAHGLRRGVTQYLMLP 126 ++++ DP++ + +W+ +L + AQ + AR +G+ GV + Sbjct: 69 LDRDYVQNDPIVAKARTASRPFLWSSVARDRNLTAAAQQVLSEARDYGMYDGVCVPVHGL 128 Query: 127 NRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKE 186 G L F R L++ + L+ + + L P + RE E Sbjct: 129 QGYQGMLIFGGPEVR----LNEREISVLHLVGIYASNKVRELVGANTNRPRHRLTPRELE 184 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L+W+A GKTS EI+ IL+IS++T +++ + +K++A N+T GLI Sbjct: 185 CLKWSAAGKTSWEISQILNISQHTADWYLASAARKLHAANRTHAVAEGFRLGLI 238 >UniRef50_P0A3J5 Transcriptional activator protein ahyR/asaR n=89 Tax=Bacteria RepID=AHYR_AERHY Length = 260 Score = 205 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 65/238 (27%), Positives = 101/238 (42%), Gaps = 11/238 (4%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 L F + + + I + YDYY + P+ RPKV + P++WV Y Sbjct: 8 EYLEHFTSVTDGDRLAELIGRFTLGMGYDYYRFALIIPMSMQRPKVVLFNQCPDSWVQAY 67 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQ-------PLWEAARAHGLRRGVTQYLM 124 A + LA DP++ + WN L A+ + A GLR G++ L Sbjct: 68 TANHMLACDPIIQLARKQTLPIYWN-RLDERARFLQEGSLDVMGLAAEFGLRNGISFPLH 126 Query: 125 LPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT--PEMNFSK 182 G LSF +L E + + A +R+ + P+ + Sbjct: 127 GAAGENGILSFITAERASSDLLL-ESSPILSWMSNYIFEAAIRIVRVSLREDDPQEALTD 185 Query: 183 REKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 RE E L W +EGKTS EIA IL I+E TVN+H + +K + N+ Q ++G++ Sbjct: 186 RETECLFWASEGKTSGEIACILGITERTVNYHLNQVTRKTGSMNRYQAIAKGVSSGIL 243 >UniRef50_A1TTR7 Transcriptional regulator, LuxR family n=3 Tax=Acidovorax citrulli RepID=A1TTR7_ACIAC Length = 242 Score = 205 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 66/238 (27%), Positives = 102/238 (42%), Gaps = 10/238 (4%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCV----RHPVPFTRPKVAFYT-NYPE 65 R + R + T E+ E L Y ++SLC + ++P + + NYP Sbjct: 4 RDFIQRANQALTQTELLACFEQAVLLLGYQHFSLCYVQLRQDGSGTSQPPIGVLSHNYPS 63 Query: 66 AWVSYYQAKNFLAIDPVLNPENFSQGHLMWND--DLFSEAQPLWEAARAHGLRRGVTQYL 123 WVS+Y A+N+ DPV + W D + + A GL G+ + Sbjct: 64 RWVSHYIARNYYLEDPVRRHAPQAMSPYRWKDVSAQGDREAHIMDEATDAGLADGLGLPI 123 Query: 124 MLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTP-EMNFSK 182 P + + + S +++ + +D L+ + MR E P + + Sbjct: 124 HEPGGRIFLATVA--SHQQLTLGNDACVRTYALVTAFHALYTMRFATEQTQIPTAVKLTS 181 Query: 183 REKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 RE E L W A GK+S EI I+ ISE+TVNFH KN K + ++ A AA GLI Sbjct: 182 REAECLTWVAYGKSSWEIGRIMRISEHTVNFHLKNAMAKFDTASRVTAAVRAANLGLI 239 >UniRef50_P25084 Transcriptional activator protein lasR n=10 Tax=Pseudomonas RepID=LASR_PSEAE Length = 239 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 4/229 (1%) Query: 16 RFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKN 75 +R E ++ A L + + NYP AW +Y Sbjct: 9 ELERSSGKLEWSAILQKMASDLGFSKILFGLLPKDSQDYENAFIVGNYPAAWREHYDRAG 68 Query: 76 FLAIDPVLNPENFSQGHLMWNDDLF--SEAQPLWEAARAHGLRRGVTQYLMLPNRALGFL 133 + +DP ++ S + W ++ + +E A A GL G+T L LG L Sbjct: 69 YARVDPTVSHCTQSVLPIFWEPSIYQTRKQHEFFEEASAAGLVYGLTMPLHGARGELGAL 128 Query: 134 SFSRCSAREIPILS--DELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWT 191 S S + + + + +L +L + L E ++ + + REKE+L+W Sbjct: 129 SLSVEAENRAEANRFMESVLPTLWMLKDYALQSGAGLAFEHPVSKPVVLTSREKEVLQWC 188 Query: 192 AEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 A GKTS EI++I + SE VNFH N+++K ++ A A GLI Sbjct: 189 AIGKTSWEISVICNCSEANVNFHMGNIRRKFGVTSRRVAAIMAVNLGLI 237 >UniRef50_Q13KP8 Transcriptional regulator, LuxR family n=3 Tax=Burkholderia RepID=Q13KP8_BURXL Length = 234 Score = 203 bits (516), Expect = 6e-51, Method: Composition-based stats. Identities = 60/225 (26%), Positives = 94/225 (41%), Gaps = 4/225 (1%) Query: 20 METAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAI 79 E + I + ++ + + + Y W Y + + I Sbjct: 7 AADEAEWFGTIAGLVETWGFEKLLIAMLPRPTIRLEDAYVRSTYSPIWRRTYDEQGLVHI 66 Query: 80 DPVLNPENFSQGHLMWNDDLF--SEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSR 137 DP ++ L+W+ D+F + Q ++E ARAHGLR GVT + PN+ G + F Sbjct: 67 DPTVSHCATRATPLIWSPDIFTTAPQQSMYEEARAHGLRAGVTLPIHGPNQEAGMMCFVN 126 Query: 138 CSAREIPILSDEL--QLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGK 195 S + LL + R + T + RE+E L+WTA GK Sbjct: 127 DSNPNDEFWQHINVALPNLVLLRDLVIDTSQRHLNTHAQTLLPKLTPRERECLKWTARGK 186 Query: 196 TSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 ++ EI+ IL+ SE VNFH KN++ K ++ A A GLI Sbjct: 187 STWEISHILNCSEAVVNFHMKNIRTKFGVNSRRAAAVIATQLGLI 231 >UniRef50_B2JQL2 Transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=B2JQL2_BURP8 Length = 234 Score = 202 bits (515), Expect = 6e-51, Method: Composition-based stats. Identities = 66/227 (29%), Positives = 99/227 (43%), Gaps = 6/227 (2%) Query: 19 RMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY-TNYPEAWVSYYQAKNFL 77 E + E+ A +D + + P P R + AF + Y W +Y + F Sbjct: 6 EAENDVTWFRELARLADDWGFDRVLVGIL-PRPGMRLEDAFIRSTYSPTWRQFYNEQGFA 64 Query: 78 AIDPVLNPENFSQGHLMWNDDLFS--EAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSF 135 IDP + L+W+ DLF AQ ++E ARAHGLR GV+ + P + G + F Sbjct: 65 HIDPTVAHCMTKSSPLIWSPDLFDTYPAQTMYEEARAHGLRAGVSLPIHGPRQESGLICF 124 Query: 136 SRCSAREIPILS--DELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAE 193 D + + LL + + + RE+E L+WTA Sbjct: 125 VNDHNPSDDFWRHLDVVLPNLVLLRDLVIDTSQPHLNTHTQALVPKLTPREQECLKWTAR 184 Query: 194 GKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 GK++ EI+ IL+ SE VNFH KN++ K ++ A A GLI Sbjct: 185 GKSTWEISHILNCSEAVVNFHLKNIRTKFGVNSRRAAAVIATQLGLI 231 >UniRef50_B2UGC8 Transcriptional regulator, LuxR family n=1 Tax=Ralstonia pickettii 12J RepID=B2UGC8_RALPJ Length = 253 Score = 202 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 68/239 (28%), Positives = 101/239 (42%), Gaps = 17/239 (7%) Query: 19 RMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTR---------------PKVAFYTNY 63 + E+ +E A L Y + R ++ Y Sbjct: 13 TAGSHAEIAAFMERHAGNLGYGRFFYSPLLVAGDARHFFKDDHNVVAAEMLYTKNIFSTY 72 Query: 64 PEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWN-DDLFSEAQPLWEAARAHGLRRGVTQY 122 P +W+ YQ +A DPV+ S + W+ DDL + P+++ AR HGL G+T Sbjct: 73 PASWIRRYQEAGHVAADPVVKLITTSNLPIHWDADDLQAARSPVFDEAREHGLATGITIP 132 Query: 123 LMLPNRALGFLSFSRCSAREIPILSDELQLKMQLL-VRESLMALMRLNDEIVMTPEMNFS 181 + + S + A E + + +L A+ RL+ + P + + Sbjct: 133 INGFDHTRALFSVTSDQAPERSQRHTDAISGLAVLTALHLHEAVRRLDASMSNAPIPSLT 192 Query: 182 KREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 REKE L+W A GKTS EIA ILS+SE TV FH N KK+ A N+ Q A + LI Sbjct: 193 SREKECLQWAAAGKTSWEIARILSVSERTVIFHIGNATKKLGATNRRQAVARAISLRLI 251 >UniRef50_B1M9X4 Transcriptional regulator, LuxR family n=2 Tax=Methylobacterium RepID=B1M9X4_METRJ Length = 248 Score = 202 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 57/235 (24%), Positives = 96/235 (40%), Gaps = 6/235 (2%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTR-PKVAFYTNYPEAWVSY 70 ++ R +R T +VY E+ YD + + P + + +P W Sbjct: 13 DIVHRLRRASTDVDVYSELRRSGAIFGYDVFLIAGLPRAPHENLYDCSLISGWPPEWGRR 72 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQP----LWEAARAHGLRRGVTQYLMLP 126 YQ + + +DPV+ + +W + + ++ P + E ARA L G Sbjct: 73 YQERRHMHVDPVIRHIRGTTDPFLWQEAVDAQVTPEGMVVMEEARAFSLNEGFCVPFHQI 132 Query: 127 NRALGFLSFSRCSAREIPILSDELQL-KMQLLVRESLMALMRLNDEIVMTPEMNFSKREK 185 + +SF R L L + + +A R E TP + RE Sbjct: 133 DGTEAGVSFGGEQVRLSQDERAALHLVAIYAMSTAKAIARRRGLSEDDGTPPSPLTGREA 192 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E L+W++ GK++ EI +ILSIS TV H + +K+N+ +TQ A +I Sbjct: 193 ECLKWSSTGKSAWEIGVILSISTRTVEHHLGSAVRKLNSVTRTQAVAEALRRHII 247 >UniRef50_P35327 Transcriptional activator protein luxR n=26 Tax=Vibrionaceae RepID=LUXS_VIBF1 Length = 250 Score = 201 bits (511), Expect = 2e-50, Method: Composition-based stats. Identities = 66/237 (27%), Positives = 107/237 (45%), Gaps = 10/237 (4%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 ++ + + +++ + A+ + +YY + +P +P V+ NYPE W Y Sbjct: 10 EKIIDKIKTCNNNKDINQCLSEIAKIIHCEYYLFAIIYPHSIIKPDVSIIDNYPEKWRKY 69 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWN----DDLFSEAQPLWEAARAHGLRRGVTQYLMLP 126 Y L DPV++ + WN + E+ + + A+ GL G + + Sbjct: 70 YDDAGLLEYDPVVDYSKSHHSPINWNVFEKKTIKKESPNVIKEAQESGLITGFSFPIHTA 129 Query: 127 NRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT---PEMNFSKR 183 + G LSF+ + I +D L L V L +L+ +I T + +KR Sbjct: 130 SNGFGMLSFAHS---DKDIYTDSLFLHASTNVPLMLPSLVDNYQKINTTRKKSDSILTKR 186 Query: 184 EKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 EKE L W +EGK++ +I+ IL SE TV FH N Q K+N N+ Q A TG I Sbjct: 187 EKECLAWASEGKSTWDISKILGCSERTVTFHLTNTQMKLNTTNRCQSISKAILTGAI 243 >UniRef50_P55629 Putative HTH-type transcriptional regulator y4qH n=4 Tax=Rhizobiales RepID=Y4QH_RHISN Length = 326 Score = 201 bits (511), Expect = 2e-50, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 104/246 (42%), Gaps = 12/246 (4%) Query: 4 KDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVA----F 59 ++ +L + ++++ + A + + + +V Sbjct: 82 DEYVVELGRLLDLTDGVAQPKKLFDLLSAFAFKFGCKWLAYGPLTSDHKALNRVKCDSEE 141 Query: 60 YTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEA-----QPLWEAARAHG 114 NYP+ W + I PV+ G + W+D + + +++ A G Sbjct: 142 ILNYPDGWRERCLEMGYETIAPVIKESRMGAGPIRWSDMYSDASTTEYERRMFDEAAMFG 201 Query: 115 LRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVM 174 LR G+T L P + +SF+R RE D +QL + + ++ + + Sbjct: 202 LRSGITVPLRGPRGSCAIMSFARHCERE---FHDRTIAYLQLAATHFHLRVAKIANLNAV 258 Query: 175 TPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 S REKE + W A GK+S +I +I+ ISENTVNFH KN+ +K+ ++T A A Sbjct: 259 QKIPALSLREKECVLWVARGKSSWDIGVIMRISENTVNFHIKNVMRKLGTSSRTVAAIKA 318 Query: 235 AATGLI 240 + G+I Sbjct: 319 ISLGII 324 >UniRef50_C5B507 LuxR type transcriptional regulator n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B507_METEA Length = 242 Score = 200 bits (508), Expect = 4e-50, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 89/234 (38%), Gaps = 9/234 (3%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 + ++V H +E + ++++ + +V P W +Y Sbjct: 11 DFVEGLDDCHDHDQVAHSVERILAEFGFEHFVITGLPNPNDRLDQVLLIRRLPAGWFEHY 70 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWNDDLF-----SEAQPLWEAARAHGLRRGVTQYLMLP 126 N++ +DPV + W + + A + + A G+ RG + + P Sbjct: 71 ARHNYMYLDPVFRNCRATTSPFDWGEAPYDPETEPGAIEVMQRATDFGMARGFSVPIHGP 130 Query: 127 NRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKE 186 S S + P L+ + + ++ + ++ P ++RE+E Sbjct: 131 EGCEACFSMSGRN----PDLTGRTKPAVHMIAMYAFERARQVGRRPAKPPSNPLTQREQE 186 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +L W A GK+S + A I+ I+E T H N K+ A N+TQ A + I Sbjct: 187 VLTWAALGKSSRDTAEIMQITERTALAHAVNATHKLGAANRTQAVVRAMQSKFI 240 >UniRef50_Q21EX4 Transcriptional regulator, LuxR family n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21EX4_SACD2 Length = 247 Score = 199 bits (507), Expect = 5e-50, Method: Composition-based stats. Identities = 48/236 (20%), Positives = 88/236 (37%), Gaps = 7/236 (2%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTR-PKVAFYTNYPEAWVSY 70 + E + + + +++Y + P ++ +NYP+ W Sbjct: 8 ELCSALCEATDEETLKELCLKFCELVGFEFYIFGIISSASSLSSPTISTISNYPDEWFKN 67 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEA------QPLWEAARAHGLRRGVTQYLM 124 Y + DPV+ + + W + E + + A GL G++ + Sbjct: 68 YFEEGMQRHDPVVRYCMQNTSAIRWRQLMDLEHYVDAIGEKIMIRASESGLCDGLSIPIK 127 Query: 125 LPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKRE 184 P+ + S + + + Q + L ++ + + + RE Sbjct: 128 APSGEIAIFSLASNREEGLNQRINACLPFAQSFGTQVFECYSALMLKLAQNKQTHLTARE 187 Query: 185 KEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 KE L W EGKT+ EI+ IL +SE TV FH + K+ A N+ A +GLI Sbjct: 188 KESLFWACEGKTTWEISKILDVSERTVIFHLSSATSKLGAVNRQHAVAKAILSGLI 243 >UniRef50_B9K1Q2 DNA-binding HTH domain-containing protein n=1 Tax=Agrobacterium vitis S4 RepID=B9K1Q2_AGRVS Length = 307 Score = 199 bits (507), Expect = 6e-50, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 15/241 (6%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPV----PFTRPKVAFYTNYPEAWV 68 ++R +A E+ +E + L Y Y+S + NYPE WV Sbjct: 48 FIMRLNAAVSAAEMKAVMESSIKSLGYKYFSYHILQTPVLNATNETRHTFGINNYPEEWV 107 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFS-----EAQPLWEAARAHGLRRGVTQYL 123 Y ++ ++ DP++ + W+D + S E + + E A G+ G+T L Sbjct: 108 ERYASERYVYCDPIVGISLSRKTPFRWSDAIDSDKLTEEERCVIEDAAKRGIVNGLTVPL 167 Query: 124 MLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMN---- 179 M + L ++ + E L + AL + +E ++ Sbjct: 168 MSRHGELAIMTVI--PDEKFQDSLPEAHLIHIISQFFHSCALPVVMEEHLIGSYRRRRSF 225 Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 S REKE + W ++GK+S EIA IL ISE +V F+ +++++K+ A N+TQ A GL Sbjct: 226 LSAREKETVIWVSKGKSSWEIAKILGISEKSVEFYMESVKRKLEAVNRTQAVVKAIMLGL 285 Query: 240 I 240 I Sbjct: 286 I 286 >UniRef50_A7KC31 Transcriptional activator protein n=1 Tax=Pseudomonas corrugata RepID=A7KC31_9PSED Length = 242 Score = 198 bits (505), Expect = 9e-50, Method: Composition-based stats. Identities = 59/240 (24%), Positives = 104/240 (43%), Gaps = 5/240 (2%) Query: 3 DKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTN 62 F+ + + + + EE + +L + ++ P PF K++ Y+N Sbjct: 6 SSHLFNLIQEVENNISGV-SEEEYTEILGWIFSRLGIEKFAYVHLEPTPFNNSKISIYSN 64 Query: 63 YPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND--DLFSEAQPLWEAARAHGLRRGVT 120 YP WV Y+ + DPV+ + WN+ +++ + ++G+++G T Sbjct: 65 YPSEWVDTYRKNSLYKSDPVMANTAITATPFFWNEIPAEIDNNPEIFDQSASYGIKQGYT 124 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 + P RA G L S S P ++ + ++ S++A E + + Sbjct: 125 VPIHEPGRAFGSLHLS--SEENDPDFPIIVRSNLFIIKTLSVIANQYRPMETTIESNLKL 182 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 S RE E LRW A GK EI +I++I+E TV FH K M +K++ N Q A + Sbjct: 183 SPREIEFLRWLALGKNYKEIGLIMNITERTVKFHAKQMTEKMDCTNVKQAMIKAVQLNFV 242 >UniRef50_B1Z7Q1 Transcriptional regulator, LuxR family n=3 Tax=Methylobacterium RepID=B1Z7Q1_METPB Length = 243 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 55/247 (22%), Positives = 96/247 (38%), Gaps = 13/247 (5%) Query: 2 QDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPF---TRPKVA 58 + +L R + E++ I + + +Y + T+ Sbjct: 1 MSRKSLDLTLEILKSLDRAHSREDILRAIMPRLNAMGIEYVISAMIPQKRLPARTQKNFV 60 Query: 59 FYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDL-----FSEAQPLWEAARAH 113 N + W Y +K ++ DP++ S W++ +A+ + A Sbjct: 61 ILENTSDEWNRLYFSKGYMYFDPIVQATLSSTTGFRWSETDPAGLQDPKARQVMNEAVEF 120 Query: 114 GLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIV 173 GL G T L G L+F+ R++ I Q M L+ ++ L D Sbjct: 121 GLGDGFTVPLATLEEERGGLTFA---GRQLDISPG--QRGMLTLIASYVVGQTLLIDNGP 175 Query: 174 MTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 M + RE+E L+W AEGKT EI ++ IS + V+FH ++ + K+ ++TQ Sbjct: 176 SERRMGLTPRERESLQWVAEGKTDWEIGELMGISRHGVDFHLRSARVKLGCVSRTQAVAE 235 Query: 234 AAATGLI 240 GLI Sbjct: 236 GFRRGLI 242 >UniRef50_Q9ANB1 ID375 n=2 Tax=Bradyrhizobium japonicum RepID=Q9ANB1_BRAJA Length = 261 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 52/232 (22%), Positives = 95/232 (40%), Gaps = 12/232 (5%) Query: 19 RMETAEEVYHEIELQAQQLEYDYYSLCVR-----HPVPFTRPKVAFYTNYPEAWVSYYQA 73 + + ++ + A +D + +P P N+P W Y Sbjct: 32 QTRSIAALFDLLVNFASNEGFDKVAYGALSCSNERRLPEYLPPPPTI-NFPSDWCQRYAE 90 Query: 74 KNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYLMLPNR 128 + + AIDPV+ +W++ +L + A+ GL+ G++ L Sbjct: 91 QEYQAIDPVVRRTAMLPRPFLWDELTSRYELQPRELRVLREAKEAGLKHGMSVPLFGSQG 150 Query: 129 ALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEIL 188 F+SF+ P + ++ + DE T ++ + RE E L Sbjct: 151 RSAFVSFASPFDDADPQDRMAHLTTLASAFHNAVAQITPPLDESCET-DIPLTPRETECL 209 Query: 189 RWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 W AEGK++ I ++++++NTVNFH KN+ +K+ A N+T A G+I Sbjct: 210 YWVAEGKSAWVIGQLVNVTDNTVNFHMKNVIRKLGAANRTNAVAKATRRGII 261 >UniRef50_B1VJE7 VR protein n=2 Tax=Pseudomonas fuscovaginae RepID=B1VJE7_9PSED Length = 239 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 4/229 (1%) Query: 16 RFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKN 75 A + + L Q+L Y ++ +N+P+AW Y +N Sbjct: 9 ELLSAMDARTWFQSLVLSVQKLGYSQVLYALKPNKEAQNSTARIMSNFPDAWRDLYDNEN 68 Query: 76 FLAIDPVLNPENFSQGHLMWNDDLFS--EAQPLWEAARAHGLRRGVTQYLMLPNRALGFL 133 + +IDPV++ S ++W D L+ + E AR GL G+T + P +G L Sbjct: 69 YSSIDPVVSHSFSSSLPILWEDKLYKTRREKEFAEDARRAGLSHGLTLPIHGPQGQVGML 128 Query: 134 SF--SRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWT 191 S + E + +L ++ + L + + + RE EIL W Sbjct: 129 SLSCAPMPQNEYLQVLQHSIAAASMLRDYAVTSGSSLFLHNSSSTAPHLTPRELEILHWA 188 Query: 192 AEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 KT+ EI ILS++E TV FH KN+++K+N ++ A L+ Sbjct: 189 WAEKTTWEIGKILSLAEPTVEFHFKNIRRKLNVSSRRLAVARAIQLDLM 237 >UniRef50_A6CUQ5 LuxR, transcriptional regulator n=1 Tax=Vibrio shilonii AK1 RepID=A6CUQ5_9VIBR Length = 259 Score = 198 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 5/224 (2%) Query: 22 TAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDP 81 E++ ++ + + +++Y V PV R + TN P AW +Y+ + D Sbjct: 22 DFEDLSGKLAEVTEVIGFEHYLFAVSVPVTVMRAENVVLTNQPLAWRQFYEDNEVMYFDQ 81 Query: 82 VLNPENFSQGHLMWNDDL---FSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFS-R 137 V+ S L W L + + + + A GL G+T L + LG +SFS R Sbjct: 82 VVLHCRNSMLPLQWRSLLANDIPDDKNVIKLASDFGLGDGITIPLRANHGCLGLISFSNR 141 Query: 138 CSAREIPILSDELQLKMQLLVRESLMALM-RLNDEIVMTPEMNFSKREKEILRWTAEGKT 196 R+I S L + LV + + + + ++ + + + RE+ L W AEGK+ Sbjct: 142 KGTRKIDHESTILSTYVGSLVADYINDIRNHVCEKQFGQVKSSLTLREQICLAWVAEGKS 201 Query: 197 SAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 S E+A I+ SE TVNFH +N +K+NA ++TQ A TG I Sbjct: 202 SWEVAQIIGCSERTVNFHIQNASEKLNAFSRTQAVSKALLTGSI 245 >UniRef50_Q3SUZ7 Transcriptional regulatory protein, LuxR family n=6 Tax=Bradyrhizobiaceae RepID=Q3SUZ7_NITWN Length = 241 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 61/248 (24%), Positives = 101/248 (40%), Gaps = 17/248 (6%) Query: 2 QDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKV---- 57 + T + R + T E+ + A+ L + + L P+P + Sbjct: 1 MSRRTLDDTLTFIARVDKASTPAEIADAVVDVARPLGFSH-VLAGIIPIPGMTAEQQISN 59 Query: 58 AFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARA 112 +P+AW Y K +L DP + N S +W++ + AR Sbjct: 60 VVLHRWPKAWSERYFTKGYLFDDPTIQRVNTSTEPFLWSELEPTYRNTPAPTRVMGEARE 119 Query: 113 HGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEI 172 L G T ++ N S + A IL +LQL ++ A R + Sbjct: 120 FNLGCGFTVPMITLNGQTAGFSLASERAEVPSILRGQLQL-------IAMYAFARALGQK 172 Query: 173 VMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVAC 232 +N + RE +IL+W AEGK+ EI++IL +SE+ V+ + ++ K+NA N+TQ Sbjct: 173 YKPAPVNLTPREMDILQWMAEGKSDWEISVILKVSEHLVDKIARQLRAKLNATNRTQTVA 232 Query: 233 YAAATGLI 240 A LI Sbjct: 233 VALRHNLI 240 >UniRef50_B3Q959 Transcriptional regulator, LuxR family n=7 Tax=Bradyrhizobiaceae RepID=B3Q959_RHOPT Length = 243 Score = 196 bits (499), Expect = 4e-49, Method: Composition-based stats. Identities = 61/234 (26%), Positives = 95/234 (40%), Gaps = 12/234 (5%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 + +R+E + E + Y + P++ +P W Y Sbjct: 15 EFVDSVERLEAPA-LISRFESLIASCGFTAYIMAGLPSRNAGLPELTLANGWPRDWFDLY 73 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYLMLP 126 ++NF A+DPV + +W+D D A + A GL G L Sbjct: 74 VSENFSAVDPVPRHGATTVYPFVWSDAPYDRDRDPAAHRVMTRAAEFGLVEGYCIPLHYD 133 Query: 127 NRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKE 186 + S + A + P LS + MQL+ + L L+ + RE E Sbjct: 134 DG-----SAAISMAGKDPDLSPAARGAMQLVSIYAHSRLRALS-RPKPIRRNRLTPRECE 187 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 IL+W A+GKT+ EI++IL I+E TV FH +K++A N+T A GLI Sbjct: 188 ILQWAAQGKTAWEISVILCITERTVKFHLIEAARKLDAANRTAAVAKALTLGLI 241 >UniRef50_D2LFU9 Transcriptional regulator, LuxR family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LFU9_RHOVA Length = 251 Score = 196 bits (499), Expect = 5e-49, Method: Composition-based stats. Identities = 61/243 (25%), Positives = 95/243 (39%), Gaps = 17/243 (6%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVR--HPVPFTRPKVAFYTNYPEAWV 68 + ++++EV YD Y + HP NYP+ W+ Sbjct: 7 ERFIEDANAAKSSKEVSALFGKALAVFGYDRYCYSLITDHPSLGLNAGHGLVCNYPDDWM 66 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDL-----FSEAQPLWEAARAHGLRRGVTQYL 123 +Y+ + DPV + W + + + A L G+ + Sbjct: 67 EHYRLNQYEKKDPVPQYGISASRPFTWASVVAQRKWHPDQMKVMHEAEEARLCDGIAVPV 126 Query: 124 MLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTP------E 177 N L + P + L K+Q L + +A L E + TP E Sbjct: 127 CGVNGELAGFGIASSHGGVSPDRT--LLHKVQALAIQFHLAFTEL--EKIETPLTENLAE 182 Query: 178 MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAAT 237 + ++REKEI+ W AEGK+ + IA IL +S +TV FH N+ KK+NA +T A Sbjct: 183 VYLTEREKEIMSWAAEGKSDSVIAEILGVSHSTVRFHMNNVFKKLNANERTLATVKAIRH 242 Query: 238 GLI 240 GLI Sbjct: 243 GLI 245 >UniRef50_C5V7F6 Transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V7F6_9PROT Length = 243 Score = 196 bits (499), Expect = 5e-49, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 102/238 (42%), Gaps = 10/238 (4%) Query: 13 MLLRFQ---RMETAEEVYHEIELQAQQLEYDYYSLCVRHPV--PFTRPKVAFYTNYPEAW 67 + RF + E + + L Y+ L + P +NY W Sbjct: 3 FIERFSDLISCSSQEIWRNRVFKLGCDLGYEQTRLAILPDPRAPIEAEHAFQQSNYSADW 62 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFS--EAQPLWEAARAHGLRRGVTQYLML 125 ++ Y A+ +DP + L+W+ +FS + + ++E A +G++ GVT + Sbjct: 63 LNKYTAEKLHHVDPTFSHCISKSTPLIWSPKIFSAQKQKEMYEEACGYGVKSGVTLPIHG 122 Query: 126 PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLM---ALMRLNDEIVMTPEMNFSK 182 LG + F + + D +L + +L + + ++ + Sbjct: 123 AKGELGIVCFVSDTKPDKRFHRDANHHLPELACFRDFILESSLQFMKPSRQVENPISVTH 182 Query: 183 REKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 RE E L+W+A GK+S EI IL+ +E TVNFH N+++K + ++ Q A + GLI Sbjct: 183 RELECLKWSASGKSSWEIGHILNCTEATVNFHFSNIRRKFSTTSRQQAIVKAISLGLI 240 >UniRef50_B7T9X0 LuxR family transcriptional regulator n=2 Tax=Bacteria RepID=B7T9X0_9PROT Length = 246 Score = 195 bits (497), Expect = 7e-49, Method: Composition-based stats. Identities = 52/230 (22%), Positives = 100/230 (43%), Gaps = 2/230 (0%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQ 72 ++ ++ ++ A +++ + PF P + YP+++ Y+ Sbjct: 16 LIASVIEATDEADLLKRMQAAAVASGFEHVLFGIELRRPFLDPIQHITSGYPDSYQEIYR 75 Query: 73 AKNFLAIDPVLNPENFSQGHLMWNDDLF-SEAQPLWEAARAHGLRRGVTQYLMLPNRALG 131 K F++ DP + L+W +D++ +++ + E + +GL G + + + Sbjct: 76 TKGFISRDPSVAYCQTHTKPLIWGEDMYLADSYEIMEESTKYGLSHGFSVPVRDGPHVVS 135 Query: 132 FLSFSRCSAREIPILSD-ELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRW 190 LS +R E + M L + + + ++ T S+RE E L+W Sbjct: 136 MLSLARDKPFESAAEKKLVVDAGMVLANCVHVASKNIIVPDVETTLRPKLSRREHECLKW 195 Query: 191 TAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 AEGK++ I+ +L ISE TV FH +N+ K+N + Q A GLI Sbjct: 196 IAEGKSNGVISDLLKISEPTVEFHIRNLFTKLNVATRVQAAVVGVLMGLI 245 >UniRef50_A0ZSG9 LuxR n=1 Tax=Shewanella hanedai RepID=A0ZSG9_SHEHA Length = 243 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 4/226 (1%) Query: 17 FQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNF 76 + E ++ + A L+ +YY + +PV + + NYP W YY + Sbjct: 11 LRLSENDNDLNACLTKLALLLDCEYYLFAILNPVSIFKSDLYILDNYPSCWKKYYNDEKL 70 Query: 77 LAIDPVLNPENFSQGHLMWN----DDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGF 132 + DP+++ + ++W+ + E A+ L+ G + + N + G Sbjct: 71 IDYDPIIDYSASNYAPIIWSMLEQSKWDKNKTNVIEEAKNSNLKSGFSFPVHTKNNSFGV 130 Query: 133 LSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTA 192 +SF+ + + I LLV L+ + ++ + + REKE L W + Sbjct: 131 ISFANSNNEKTLISLHSNSYSYVLLVLPELLDSHQRINKNIGNTCTQLTPREKECLAWIS 190 Query: 193 EGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 EGKT+ EI+ IL SE TV+FH N+Q K+ N++Q + TG Sbjct: 191 EGKTTWEISKILDCSERTVSFHITNLQTKLGTNNRSQSISKSILTG 236 >UniRef50_B0U8W7 Transcriptional regulator, LuxR family n=4 Tax=Methylobacterium RepID=B0U8W7_METS4 Length = 245 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 57/248 (22%), Positives = 97/248 (39%), Gaps = 12/248 (4%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLC---VRHPVPFTRPKV 57 M K R +L R T E V ++ + ++ L + VP R Sbjct: 1 MMSKRSLDLAREVLQAIHRTATPENVRDQLLRTLAGVGVEHVLLATLRICDAVPCDRRPT 60 Query: 58 AFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDD-----LFSEAQPLWEAARA 112 F YP+ W Y A++++ DPV+ W+D A+ + + A Sbjct: 61 VFAGTYPDEWARRYYARDYILHDPVVRGVGERGSGFAWSDPGLCAPDDRAARRVLDEAGE 120 Query: 113 HGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEI 172 GLR G T L+ +SF E LS ++ + L+ +L ++ L Sbjct: 121 FGLREGFTLPLLTLEGDTAGVSFV----GEKLDLSPAVRGMLTLVGTYALGQVLLLAKGE 176 Query: 173 VMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVAC 232 S RE+E L+W A+GK+ EIA + IS + H + +++K+ ++ Sbjct: 177 TGPLAEPLSPRERESLQWAADGKSDQEIADAMGISAHGAIRHLRAVRRKLGTTSRAHAVA 236 Query: 233 YAAATGLI 240 G+I Sbjct: 237 LGLRLGII 244 >UniRef50_Q2T747 Transcriptional regulator, LuxR family n=26 Tax=pseudomallei group RepID=Q2T747_BURTA Length = 230 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 5/217 (2%) Query: 26 VYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNP 85 + A Q+ Y ++++ +YP WV +Y ++ IDPV Sbjct: 15 LIETFRQAALQIGYQHHAIVELSGTSHPASIDVVSLHYPSEWVEHYTRNDYFTIDPVHRA 74 Query: 86 ENFSQGHLMWNDDLFS--EAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREI 143 WND S + L A GL G++ L P + +S S + Sbjct: 75 AFRYSTPFPWNDIATSNLRERHLLMEAEDAGLDNGISIPLHQPLGRVLLVSLSGTAPTH- 133 Query: 144 PILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMI 203 +D LL + + L + + P ++ + RE+ L W A GK+S IA + Sbjct: 134 --DADAKWRNAYLLGMQFNLQLQSMRTCRPIPPSVHLTDREQMCLTWVARGKSSWVIANM 191 Query: 204 LSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L IS+ TV+FH +N +K+N ++T A A GLI Sbjct: 192 LDISKYTVDFHIENAMEKLNTRSRTFAAVKATRQGLI 228 >UniRef50_A3JLR7 Transcriptional regulator, LuxR family protein n=4 Tax=Rhodobacterales RepID=A3JLR7_9RHOB Length = 238 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 6/226 (2%) Query: 18 QRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFL 77 + T++ I+ + +++D+ S PV + V Y NYP+ W +Y N Sbjct: 13 TQSNTSDNYLTFIDQLCEHMDFDFASYATMSPVTGS---VLGYANYPDEWKMHYMRMNLH 69 Query: 78 AIDPVLNPENFSQGHLMWNDDLFSEA-QPLWEAARAHGLRR-GVTQYLMLPNRALGFLSF 135 +DP ++ S + W E+ ++ A GL G+T + P +G LS Sbjct: 70 RVDPTIHQSARSIAPVDWTRLSRGESFNSVFYRANDFGLTDQGLTVPVRGPFGDVGLLSV 129 Query: 136 SR-CSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEG 194 +R CS RE +L+ + ++Q+ ++M+ + + S RE E+L+WTA G Sbjct: 130 TRSCSEREWKLLTRDKISELQMAAVHLHDSVMQSDVLSRALRRPSLSARETEVLQWTAIG 189 Query: 195 KTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 KT +I ILSIS TV H ++ ++K+ A Q A +I Sbjct: 190 KTQQDIGDILSISHRTVEVHMRSAREKLGALTTIQAVGRAIGYQII 235 >UniRef50_Q2RNV6 Transcriptional regulator, LuxR family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RNV6_RHORT Length = 260 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 56/242 (23%), Positives = 95/242 (39%), Gaps = 15/242 (6%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 + L + ++ + +L + + V NY ++W + Sbjct: 10 GSFLEALNGTSDSADLTTLLTGTFARLGFPHSCYHVVRLEGAGARLPYVLHNYKDSWSEH 69 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWNDDLFSE-----AQPLWEAARAHGLRRGVTQYLML 125 Y + FL IDPVL Q +W++ + E + ++ AR GL G + + Sbjct: 70 YFREGFLEIDPVLATCPDRQLPFLWSEAIAPESLSHDQRRMFSDARDAGLHDGYSVPIRG 129 Query: 126 PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMN------ 179 + ++ + + L + + LV + R V+ ++ Sbjct: 130 SHGEFATVTVIPEQGGDA---ARRLIGEQKHLVHLLALYFDRHARSTVINARLSSRRRKT 186 Query: 180 -FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 S RE+E+LRW A GKTS EIA I IS +V FH N +KK+ +KT A G Sbjct: 187 VLSPREQEMLRWAALGKTSWEIAEIAGISTKSVEFHLDNAKKKLGTYSKTHAVVKALTLG 246 Query: 239 LI 240 L+ Sbjct: 247 LV 248 >UniRef50_B0ZTC2 Transcriptional regulator n=4 Tax=Mesorhizobium RepID=B0ZTC2_9RHIZ Length = 243 Score = 194 bits (493), Expect = 2e-48, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 90/243 (37%), Gaps = 13/243 (5%) Query: 7 FSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFT----RPKVAFYTN 62 F + + Q TA V ++ + P P T + + + Sbjct: 4 FDRTLEYIDQLQHAGTAAAVCEKLLGITSDFGLT-ALMAGTVPQPGTPSGQQKQHVLLCD 62 Query: 63 YPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDD-----LFSEAQPLWEAARAHGLRR 117 +P W+ Y A+N++ DPV++ Q W + + + A A LR Sbjct: 63 WPVEWLERYVARNYVDHDPVVSHMKQLQAPFQWREAAQGISFDKSSDEVMGDAGAFKLRD 122 Query: 118 GVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPE 177 G+ L+ + + +S + + E L + A+ Sbjct: 123 GLAFPLITLDGQIVMVSLG---GEAVQLSGAEFGLVSLVSTYAVGRAMQIHTMATSTIDH 179 Query: 178 MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAAT 237 + + RE+E L+W A GK+ EI+ IL ISE+T H N + K+ A N+ Q A Sbjct: 180 IELTPRERECLQWAAVGKSEWEISQILGISEHTSEKHLLNAKSKLGAVNRVQAVAEAIRR 239 Query: 238 GLI 240 G I Sbjct: 240 GYI 242 >UniRef50_A4WT88 Autoinducer-binding domain protein n=8 Tax=Rhodobacterales RepID=A4WT88_RHOS5 Length = 233 Score = 192 bits (489), Expect = 7e-48, Method: Composition-based stats. Identities = 55/224 (24%), Positives = 94/224 (41%), Gaps = 6/224 (2%) Query: 20 METAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAI 79 ++ +L +D+ S P+ V Y NYP++W +Y +N + Sbjct: 10 ASDDANFLEYLDQLCARLGFDFASYATTSPMTGA---VQGYANYPDSWKMHYMRRNLHRV 66 Query: 80 DPVLNPENFSQGHLMWNDDLFSEA-QPLWEAARAHGLR-RGVTQYLMLPNRALGFLSFSR 137 DP ++ S + W E + ++ AA G+ +G+T + P G LS +R Sbjct: 67 DPTIHKSALSIAPVDWARFERDERFRAVFFAAEDFGITPQGLTVPVRGPYGDRGLLSVTR 126 Query: 138 -CSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKT 196 C + L +Q+ A+MR + + S RE E+L+W A GK+ Sbjct: 127 RCPRSDWDKLKRAAIGDLQVAAVHLHDAVMRSDVISRALRQPRLSTREIEVLQWVAAGKS 186 Query: 197 SAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +I IL IS TV H ++ ++K+ + Q A GL+ Sbjct: 187 QMDIGDILGISHRTVEVHLRSAREKLGTLSTVQAVGRAIGLGLV 230 >UniRef50_Q15YZ8 Transcriptional regulator, LuxR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15YZ8_PSEA6 Length = 248 Score = 192 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 103/247 (41%), Gaps = 11/247 (4%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 MQ ++F+ +L + + + E Q ++ +Y L V P + Sbjct: 2 MQVEEFY----ELLESVDESSSIDALKETCERFCQLIDIPFYLLGVIGQTSSYSPTIRVI 57 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDL----FSEAQP--LWEAARAHG 114 +NYPE W+ +Y ++ DPV+ Q + W+ + FS + ++E A A+G Sbjct: 58 SNYPEKWLEFYFKESEQQNDPVVKYIFEKQSPIRWDKLVEYQDFSSTKGLLVFEKAAAYG 117 Query: 115 LRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIV- 173 L G++ + + + S + + + D Q+ + L Sbjct: 118 LYNGLSIPIRSTSENIAVFSVAIDERSDANRVLDNAQMFCHTFATHLFERYVLLEISASD 177 Query: 174 MTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 T +KRE E L W EGKT+ EI+ I+++SE TV FH N K+ A N+ Sbjct: 178 ETDRRELTKRELECLFWACEGKTAWEISQIINVSERTVLFHLGNSNTKLGAINRQHAVAL 237 Query: 234 AAATGLI 240 A G+I Sbjct: 238 AIKKGII 244 >UniRef50_D0LSA4 Transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LSA4_HALO1 Length = 254 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 58/233 (24%), Positives = 89/233 (38%), Gaps = 13/233 (5%) Query: 20 METAEEVYHEIELQAQQLEYDYYSLCV----RHPVPFTRPKVAFYTNYPEAWVSYYQAKN 75 ++ E ++ +D++ + R + YP AW Y K+ Sbjct: 21 VDANEHAQSILQDTLATYGFDFFCFAIYGAPRGAIAIDNYH-LLLNAYPNAWADRYYEKH 79 Query: 76 FLAIDPVLNPENFSQGHLMWN-----DDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRAL 130 + DPVL S + W + A+ + A H L GVT + + L Sbjct: 80 YWYSDPVLAHCGRSPTPIDWTTVQNQPAQPASAEQVMREAHEHDLCSGVTVTVRDVSGRL 139 Query: 131 GFLSFSRC---SAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEI 187 G LS + SA + + + +L + + S+RE+E Sbjct: 140 GILSLATRDVYSAELRDRIRHAIPIAQFVLSHLVEKLEAHFHVRLEDLQRYKLSEREREC 199 Query: 188 LRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 LRW A GKTS EI IL I+E T FH N KK+ A N++ A G+I Sbjct: 200 LRWVAAGKTSWEIGHILGIAERTAIFHLNNAMKKLGAVNRSHAVARALQHGVI 252 >UniRef50_Q98A91 Transcriptional regulator n=4 Tax=Mesorhizobium RepID=Q98A91_RHILO Length = 241 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 48/227 (21%), Positives = 97/227 (42%), Gaps = 8/227 (3%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 T+L + + ++ + A + ++ T+P+ +NY W S+ Sbjct: 6 ETLLEQLSLSVDEVDFHNALASAAGAFDIPAFAYLSLVSDRVTKPR--LISNYHSGWTSH 63 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMW-----NDDLFSEAQPLWEAARAHGLRRGVTQYLML 125 Y + IDPV+ S+ W + + + Q L++ A G+ G+T L+ Sbjct: 64 YLRHQYERIDPVIEWARCSECPFQWGPGLGHAGISTRQQQLFDEAAEFGICCGLTIPLVD 123 Query: 126 PNRALGFLSFSRCSAREIPI-LSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKRE 184 + ++F+ + ++++ + ++++ + + R + ++ + RE Sbjct: 124 RRGGVAAMTFAADRLDPTFLRVAEQYEQALEIMAMCFHIGVRRKLARGLAVDGVSLTPRE 183 Query: 185 KEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVA 231 E L WTA+GK++ EI IL I E T FH N +KK+ K Q Sbjct: 184 YECLEWTAKGKSAWEIGCILGIKERTAAFHLDNAKKKLGVRTKNQAV 230 >UniRef50_Q0B5I4 Transcriptional regulator, LuxR family n=1 Tax=Burkholderia ambifaria AMMD RepID=Q0B5I4_BURCM Length = 229 Score = 189 bits (480), Expect = 7e-47, Method: Composition-based stats. Identities = 59/230 (25%), Positives = 101/230 (43%), Gaps = 3/230 (1%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQ 72 M+ +E+ + +D+ T +NYPEAW+S Y+ Sbjct: 1 MVFEIGSCTCMDELGRMLIDIGHLAGFDHVCYQEYRMSGGTLKNCRTLSNYPEAWLSLYR 60 Query: 73 AKNFLAIDPVLNPENFSQGHLMWNDDLFS--EAQPLWEAARAHGLRRGVTQYLMLPNRAL 130 + +L IDP+ S L+W D +F+ E + + R +GL GV+ + + Sbjct: 61 DRAYLTIDPIAQHALSSLMPLIWGDRIFATTEQREFRDEGRIYGLNDGVSFPAHSRHGDV 120 Query: 131 GFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRW 190 +SF R + LV ++ R E V + S RE EIL+W Sbjct: 121 ACVSFVRQARALDDGDMPCDVPSWGALVANLMLDACR-RLEAVQSDAPCLSTRELEILKW 179 Query: 191 TAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 AEGK++ +I+ I+S++E+ V H +++ KK + P + Q A+ GL+ Sbjct: 180 VAEGKSTWDISRIVSLTEHGVLHHIRSIMKKFDVPTRRQAVLMASRFGLL 229 >UniRef50_B1M2Q8 Transcriptional regulator, LuxR family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2Q8_METRJ Length = 242 Score = 188 bits (479), Expect = 9e-47, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 95/245 (38%), Gaps = 9/245 (3%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKV--- 57 M ++L +R T +E+ + + Y + + + Sbjct: 1 MPHSKHLDRTFSVLRDLERAATPDEIARLLVEAFSRYGVSYIMAGIVPDPGLPKRRHAGF 60 Query: 58 AFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDL--FSEAQPLWEAARAHGL 115 + PE W Y + + DP + + WN L A + A G+ Sbjct: 61 VLASTMPEGWARRYVTQGYALHDPTVRRLCTTATPFDWNAVLPDTPTAGRVMNEAGEFGI 120 Query: 116 RRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT 175 R G+T + + G +S S E + ++ + L+ ++ L+ +N Sbjct: 121 RAGITVPFVTLDGEPGGISVS----GERIEIDPAERVAVNLVATYAVGQLLLMNSRPAAP 176 Query: 176 PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 S RE+E L+W AEGKT EI M++ I+ V++H ++ + K++ N+ A Sbjct: 177 APARLSPREREALQWAAEGKTDVEIGMVMGITAAGVDYHLRSARAKLDTVNRAHTVAQAL 236 Query: 236 ATGLI 240 +GLI Sbjct: 237 RSGLI 241 >UniRef50_A9DRS2 Transcriptional regulator, LuxR family protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DRS2_9RHOB Length = 239 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 14/221 (6%) Query: 28 HEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPEN 87 + + AQ + + S H P +T Y AW++ YQ +N+ IDPV++ Sbjct: 23 EILNVLAQDMGLNNLSYLGFHKDPCGGSDPVIHTTYDPAWLARYQEENYHLIDPVVDSAL 82 Query: 88 FSQGHLMWNDDLFSE--AQPLWEAARAHGLR-RGVTQYLMLPNRALGFLSFSRCSAREIP 144 + W++ + + + A G+R GV+ + L+ + Sbjct: 83 EGTLPVDWSELPKVDRVTRDFFGEAMEFGVRQNGVSIPIRDHVHGKAVLTLNS------D 136 Query: 145 ILSDELQLKMQLLVRESLMALMRLNDEIVM-----TPEMNFSKREKEILRWTAEGKTSAE 199 + E + + ++ +++ L ++V P S+REKE+L+W A GKT+ E Sbjct: 137 LRIHEWRKYKRGIIADAIYLGCLLQSDLVAGIAGGEPGPRLSRREKEVLKWAAVGKTAWE 196 Query: 200 IAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 A I+++S +TVN H N K++ NKT A LI Sbjct: 197 TAQIMTVSNSTVNHHLYNACAKLDVANKTHAVAKAIRAQLI 237 >UniRef50_C9NVD6 Transcriptional activator protein luxR n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NVD6_9VIBR Length = 240 Score = 187 bits (475), Expect = 3e-46, Method: Composition-based stats. Identities = 55/231 (23%), Positives = 100/231 (43%), Gaps = 4/231 (1%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQ 72 ++ +Q +++ E + +E + +Y+ L V + N+P Sbjct: 7 LIDDYQTIDSIESMGRLLEQLNHIVNSEYFVLGVSFDPHIKNGRFIVVDNFPADCREDSC 66 Query: 73 AKNFLAIDPVLNPENFSQGHLMW--NDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRAL 130 + +DP+ + +W + + +Q L+ + G+ +G++ + N + Sbjct: 67 NLGLMYVDPICKFGASNCMPSVWESSKQIDIHSQELFSLSHIQGIEQGISIPIHGLNGEV 126 Query: 131 GFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRL-NDEIVMTPEMNFSKREKEILR 189 G LSF+ P +D L L QL+V + L RL + + + RE + L Sbjct: 127 GMLSFATSDVIAYPTHTDVL-LFAQLIVPLIVQNLSRLSHASQTEHSQAMLTNREIQCLT 185 Query: 190 WTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 W A+GK+++EIA I+ +E TV FH N KK+ A N+ Q A G I Sbjct: 186 WAADGKSASEIADIVDCTERTVKFHLSNACKKLGATNRCQAVTRALLGGHI 236 >UniRef50_C4L8Q9 Transcriptional regulator, LuxR family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L8Q9_TOLAT Length = 254 Score = 187 bits (474), Expect = 4e-46, Method: Composition-based stats. Identities = 59/237 (24%), Positives = 96/237 (40%), Gaps = 9/237 (3%) Query: 4 KDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNY 63 ++F + R Q +T + + +++ + ++YY LC+ + + T Sbjct: 2 QNFTFPQEEQHFRIQNCKTPQMLANQLTILCAANNFEYYQLCLTLRRGLQQTDLTLLTQT 61 Query: 64 PEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPL--WEAARAHGLRRGVTQ 121 P+ W +Y N + D + L W + E + + R G+ G+ Sbjct: 62 PDNWAEHYAKNNTIQNDSLYQRAQTQSRPLFWQSEAKPEHENFLPMDCWRQFGMEEGIAV 121 Query: 122 YLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFS 181 L P G+ + SR I + + +++E + L + N S Sbjct: 122 PLHGPAGFCGYFALSRHKKEPIRLQDFFHLSYLGHILQEQAIQLF-------SPEQSNLS 174 Query: 182 KREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 REKE L W +EGKTS EIA IL I+E TVNFH N +K N+ Q TG Sbjct: 175 GREKECLFWVSEGKTSWEIAQILGITERTVNFHLNNAIRKSGCKNRYQTVAKNIITG 231 >UniRef50_Q1GQ40 Transcriptional regulator, LuxR family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GQ40_SPHAL Length = 276 Score = 186 bits (473), Expect = 5e-46, Method: Composition-based stats. Identities = 59/245 (24%), Positives = 101/245 (41%), Gaps = 9/245 (3%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 M D + + F + E+++ + A ++ +D+++L P Sbjct: 24 MNDVKHYYLTEELAQEFTGADREEQLFAALTKAAGRMGFDHFALAFDRRGTG-EPASILV 82 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGL 115 NYP+AW Y + DP+ S W L + L AR G+ Sbjct: 83 HNYPDAWAKVYVGFDLSGTDPIRRASERSLTGFEWRHVDRYIPLSRGDRQLLSVARDSGV 142 Query: 116 RRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT 175 G T LP A G SF+ +IP ++ ++L ++ + L + Sbjct: 143 GDGFTVPRHLPGEASGTCSFAVRPHADIP---ADMLHAAEILGAIAIASARELIGSSPLR 199 Query: 176 PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 P ++R++E + W+A GKT+ EIA IL ISE TV H K +++ + ++ + A Sbjct: 200 PRPILTERQRECVLWSARGKTAGEIADILGISEETVVRHLKMARERYSVHCRSMLILCAL 259 Query: 236 ATGLI 240 GLI Sbjct: 260 FDGLI 264 >UniRef50_A9HQR0 Putative transcriptional regulator, luxR family n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HQR0_GLUDA Length = 239 Score = 186 bits (472), Expect = 6e-46, Method: Composition-based stats. Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 7/242 (2%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 M F ++ +R TA E+ + + Y + + A Sbjct: 1 MTKTVSFDKAFDLIEPLRRSTTASELRAAFVRATKSISDCYIASGRVKGGAPVNAETALV 60 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND--DLFSEAQPLWEAARAHGLRRG 118 YP+AW+ +Y + +L IDP + S W D+ + + ++ G++ G Sbjct: 61 -TYPDAWLKHYHERKYLDIDPTIVNAGRSYVPYRWEALQDISVKQRQMFLDIAETGIKGG 119 Query: 119 VTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEM 178 +T L P+RA SF+ A + D + + + + L +L++ + P Sbjct: 120 ITMSLHTPDRAAFVTSFAFTKA----VSEDRDLVALGFINSQYYETLSKLSEAELPGPVP 175 Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 FS+REKE L W + GKT+ +I++IL ISENT+N + KN+ K+ + Q A Sbjct: 176 TFSRREKECLLWVSRGKTTWDISVILGISENTINAYLKNVILKLGCSGRIQAVLRAIDLN 235 Query: 239 LI 240 LI Sbjct: 236 LI 237 >UniRef50_Q46967 Transcriptional activator protein echR n=100 Tax=Enterobacteriaceae RepID=ECHR_ERWCH Length = 250 Score = 186 bits (472), Expect = 7e-46, Method: Composition-based stats. Identities = 63/218 (28%), Positives = 96/218 (44%), Gaps = 18/218 (8%) Query: 36 QLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMW 95 L+Y Y + + P V +NYP WV Y++ N+ IDPV+ W Sbjct: 28 DLKYAYLIMNKKKPT-----DVVIISNYPSEWVEIYRSNNYQHIDPVILTAINKISPFSW 82 Query: 96 NDDLFSEAQ----PLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAR--EIPILSDE 149 +DDL ++ ++ ++ + + G T L P L LSF R E+ + Sbjct: 83 DDDLVISSKLKFSRIFNLSKEYDIVNGYTFVLHDPGNNLATLSFMFEENRSGELEEIVQN 142 Query: 150 LQLKMQLLVRESLMALMRLNDEIVMTPEMN-------FSKREKEILRWTAEGKTSAEIAM 202 + K+Q+L+ + L L E+ + FS+RE EIL W + GKT EIA+ Sbjct: 143 NKEKLQMLLISAHEKLTSLYREMSKNKNNSKSQEPNIFSQRENEILYWASMGKTYQEIAL 202 Query: 203 ILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 IL I+ +TV FH N+ KK+ N LI Sbjct: 203 ILGITTSTVKFHIGNVVKKLGVLNAKHAIRLGVEMNLI 240 >UniRef50_B5A461 Quorum sensing regulator n=1 Tax=Mesorhizobium tianshanense RepID=B5A461_9RHIZ Length = 275 Score = 185 bits (471), Expect = 9e-46, Method: Composition-based stats. Identities = 55/235 (23%), Positives = 97/235 (41%), Gaps = 12/235 (5%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSL----CVRHPVPFTRPKVAFYTNYPEAWVS 69 L ++ AE++ ++ A++ + + VP P YP WV Sbjct: 41 LEEIGQLGDAEKIPALLQRIAERYGLKTVAYLGTGTLDRRVPRQEP--FIAVTYPPEWVE 98 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEA--QPLWEAARAHGLR-RGVTQYLMLP 126 Y+A+ ++ IDP + + W++ +E + + A GL RG++ + Sbjct: 99 RYRARGYINIDPAIQIGLRRLLPIDWDEFGKAEGDLRQFFGEASEFGLGLRGISFPVHGC 158 Query: 127 NRALGFLSF-SRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREK 185 S + S RE ++ A++R + P S RE Sbjct: 159 GGDRALFSVTADFSKREWHWARRTAFRHFPIIAAHLHEAVLRTDGVFRSQPR--LSPREL 216 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E LRWT+EGKT E +IL +S +TV + ++ + K+ A + T A A +GL+ Sbjct: 217 ECLRWTSEGKTVWECGVILGLSPHTVRCYLESARHKLGASSNTHAASLATKSGLL 271 >UniRef50_C6B001 Transcriptional regulator, LuxR family n=13 Tax=Rhizobiaceae RepID=C6B001_RHILS Length = 251 Score = 185 bits (469), Expect = 1e-45, Method: Composition-based stats. Identities = 64/247 (25%), Positives = 108/247 (43%), Gaps = 22/247 (8%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPF--TRPKV---AFYTNYPEA 66 +L+ + E V E+E + ++YY L P P+ A +PE Sbjct: 8 QLLVILEECSNPEAVITELEQILRGCGFEYYGLPHHLPQSPLQQNPEPWAAALAGRWPEQ 67 Query: 67 WVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFS--------EAQPLWEAARAHGLRRG 118 W Y AK + IDP++ +Q W + + + + + A HGL G Sbjct: 68 WPQIYAAKKYALIDPMVRYLAHAQRPFRWREAMAAFRKDAYHRRMEQMMVDAFGHGLEDG 127 Query: 119 VTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDE-----IV 173 + + LG LS + + I + E+ L ++ + R++ L+ L E V Sbjct: 128 YIFPIHGRSGILGSLSLA---GKPIELSPVEIAL-LEAVARKAFWRLLDLKGEAQALETV 183 Query: 174 MTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 + + ++RE EIL + AEG TS EI+ +L IS +TV+++ +Q K+ A N+ Sbjct: 184 LPADTPLTRREMEILHYLAEGMTSMEISKMLKISNHTVDWYMNGLQDKLKAKNRQHAVAL 243 Query: 234 AAATGLI 240 A GLI Sbjct: 244 AFRHGLI 250 >UniRef50_Q6B346 Acylhomoserine lactone dependent transcriptional activator n=1 Tax=uncultured proteobacterium QS1 RepID=Q6B346_9PROT Length = 223 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 11/224 (4%) Query: 25 EVYHEIELQAQQLE-YDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVL 83 E+ +E L ++Y VR K +NYP+ W+ Y+A+++ DPV+ Sbjct: 3 ELAPSLENALSCLGEFNYSYYVVRK---SKNTKPIIVSNYPDDWLMLYEARSYHLYDPVI 59 Query: 84 NPENFSQGHLMWNDDLFSEA----QPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRC- 138 N W D S+ + L+++A + + G T L LS R Sbjct: 60 NYGMRRFAPFSWCDAQASDTADIGKELFQSAEKYQISSGFTFVLHDAAELFASLSVCRSG 119 Query: 139 --SAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKT 196 S + +++M L+ + + DE+ P S RE EIL+W +GK Sbjct: 120 RGSDFGQRVADHSAEIQMALINFHDHILSTQTVDELFPLPANLLSAREIEILQWVGKGKA 179 Query: 197 SAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E+A+I +ISE+TV FH + K+N N Q A G+I Sbjct: 180 YFEVAIICAISEHTVKFHISKISTKLNVLNAKQAVYEAIRRGII 223 >UniRef50_Q4ZNM6 Regulatory protein, LuxR n=9 Tax=Gammaproteobacteria RepID=Q4ZNM6_PSEU2 Length = 254 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 55/246 (22%), Positives = 93/246 (37%), Gaps = 17/246 (6%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYD-----YYSLCVRHPVPFTRPKVAFYTNYPEA 66 R Q T ++ L A L +D Y + V H P + N P Sbjct: 7 DFNSRLQSASTLDQQMDCALLLASDLGFDAVIYDYSPVPVSHDGALITPSLLSLRNTPAD 66 Query: 67 WVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEA----------QPLWEAARAHGLR 116 W + + ++ + IDPV + S +W+ +E +P+ + Sbjct: 67 WHALWCSQGYYQIDPVQHLAVASVSPFVWSYLPRAETVLKTFITDMHKPVVRYLHDSHMT 126 Query: 117 RGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQL-KMQLLVRESLMALMRLNDEIVMT 175 GVT + +P L+ ++ + L + LL L D+ + + Sbjct: 127 CGVTVPIHMPKGGFATLTGLCTDGSDVALEDARQSLAEFGLLAHAFQEVAYPLFDQKIRS 186 Query: 176 PE-MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 + + RE+E L W+AEG T+ EIA L+ S TV H + +K+ A N+ Q A Sbjct: 187 CNAIRLTPRERECLSWSAEGLTAREIADQLNRSVATVTLHLNSAMQKLGAKNRVQAVVRA 246 Query: 235 AATGLI 240 L+ Sbjct: 247 VHYRLL 252 >UniRef50_B8I9S3 Transcriptional regulator, LuxR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8I9S3_METNO Length = 246 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 14/245 (5%) Query: 1 MQDKDFFSWRRTM--LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKV- 57 M + F R T + + E I Q + + +++ R P P R Sbjct: 1 MSGMEDFFLRETFALIDALDEVRDPFEAQTRIFEHIQHVGFTSFTIT-RLPRPSDRLGPN 59 Query: 58 AFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFS-----EAQPLWEAARA 112 + +P+ W+++Y DPV+ + W++ F A+ + + A A Sbjct: 60 MLFNMWPKDWLTHYDRVGHYRFDPVVRQCYRTTEPFAWSEVPFDADQPDRARRVMDEAAA 119 Query: 113 HGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRL-NDE 171 GL G + G +S + E LS +++ + +L + A R D Sbjct: 120 FGLGFGFCIPVHDALGFQGGVSLA----GERIDLSPKIRRGLHMLGLYAWGAATRTTEDR 175 Query: 172 IVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVA 231 P S RE+++L W A G+T EIA IL +S TV H K+ + KI A N TQ Sbjct: 176 RRSEPGRLLSARERDVLSWAAMGRTREEIATILGVSHETVATHLKSARIKIGARNTTQTV 235 Query: 232 CYAAA 236 A Sbjct: 236 VEALR 240 >UniRef50_C3KBP0 Putative LuxR-family regulatory protein n=2 Tax=Pseudomonas RepID=C3KBP0_PSEFS Length = 235 Score = 183 bits (465), Expect = 4e-45, Method: Composition-based stats. Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 8/221 (3%) Query: 25 EVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLN 84 + + +++ Y+ Y L + P P T YP W+ Y+ +NF+ +DP++ Sbjct: 16 DWERHLRKILRRIGYERYLLSLG-PSTTHDPFNRIMTTYPSDWLKRYKDENFIQVDPIIR 74 Query: 85 PENFSQGHLMWNDDLFSE---AQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAR 141 L W W+ +GL RGV+ L N G L+ ++C + Sbjct: 75 HCRHHFAPLFWGRARLKARGCTNRFWKEREGYGLLRGVSIPLRF-NEMAGSLNVAQCVS- 132 Query: 142 EIPILSDELQ--LKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAE 199 + L+D+L L M ++ L+ + + + V P + + RE E+L+WT GKT+ E Sbjct: 133 DTDELADDLNGPLGMLFMLIPFLLEGSQKHLKTVGEPPSSLTLRESEVLKWTGVGKTTWE 192 Query: 200 IAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 ++ IL SE T+NFH N +K+ + ++ Q A A GLI Sbjct: 193 MSCILGCSERTINFHIANASRKLGSFSRRQAVGVALAQGLI 233 >UniRef50_C8SVZ2 Transcriptional regulator, LuxR family n=2 Tax=Mesorhizobium RepID=C8SVZ2_9RHIZ Length = 242 Score = 183 bits (464), Expect = 5e-45, Method: Composition-based stats. Identities = 49/233 (21%), Positives = 94/233 (40%), Gaps = 11/233 (4%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTR--PKVAFYTNYPEAWVSYY 71 + + +AE + HE L ++ + L PVP + + W Y Sbjct: 13 ITKIDTARSAEAILHEFRLAMERYGLRNF-LITGLPVPHGTDWQREILADGWSPEWHHRY 71 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWND----DLFSEAQPLWEAARAHGLRRGVTQYLMLPN 127 ++ + DP + S W + L + A+ + + A G++ G+ + +P Sbjct: 72 VSEEYFLHDPCVAQCRHSPEPFRWAELPAARLVARAKLVMDEAAEFGMKEGICVPIHVPL 131 Query: 128 RALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEI 187 G ++ + P ++ L + +L L + RE+E+ Sbjct: 132 AGPGVVTMASDRMDVPPSAMPLIET----LCVHTFRSLSGLGTPGDGYEPTPLTAREREL 187 Query: 188 LRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L W+A+GK++ +IA IL ++ NTV HQ+N++ K++A N A I Sbjct: 188 LEWSAQGKSTDDIACILGVTRNTVESHQRNIRAKLDAINVAHAIVKALRRQEI 240 >UniRef50_C4RYA9 Transcription regulator SdiA n=1 Tax=Yersinia bercovieri ATCC 43970 RepID=C4RYA9_YERBE Length = 238 Score = 182 bits (463), Expect = 7e-45, Method: Composition-based stats. Identities = 60/230 (26%), Positives = 104/230 (45%), Gaps = 4/230 (1%) Query: 15 LRFQRMETAEEVYHEIE-LQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQA 73 F R++ +EE +I + ++S +R P T ++ + NY ++W + Y+ Sbjct: 9 ESFNRIDVSEETLQQISNYITLNTGFSFFSFVIREIYPITESRIYTFDNYNDSWRTLYEK 68 Query: 74 KNFLAIDPVLNPENFSQGHL-MWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGF 132 IDPV+ + Q +W+ F + +W +G + G+T + LP Sbjct: 69 NKLWKIDPVIFYKPMPQLEYAVWDSLFFKGHEEIWAYGVEYGYQSGITFGMPLPQGYHSI 128 Query: 133 LSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVM--TPEMNFSKREKEILRW 190 LS S S P Q + + + +++ + + + +KRE IL + Sbjct: 129 LSLSNMSHSITPKEISLAQSYFSKICVKIINSIILNAESPITFNKNNITLTKRELMILMF 188 Query: 191 TAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + +G TS EIA + IS++TV+FH N+ KK+N NK Q A GLI Sbjct: 189 SVDGMTSHEIAGKIFISKSTVDFHMLNIIKKLNCKNKFQAISKALIMGLI 238 >UniRef50_A6UE86 Regulatory protein LuxR n=4 Tax=Rhizobiales RepID=A6UE86_SINMW Length = 246 Score = 182 bits (462), Expect = 9e-45, Method: Composition-based stats. Identities = 67/243 (27%), Positives = 107/243 (44%), Gaps = 19/243 (7%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRP-KVAFYTNYPEAWVSY 70 L + M+T EE+ E E + +D+Y + VR P P P ++ +PE W Sbjct: 8 QFLALLEEMKTREEILPEFERLLDRCGFDFYGV-VRQPKPHENPLRLLLAGRWPEGWPQI 66 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWNDDL--------FSEAQPLWEAARAHGLRRGVTQY 122 Y K ++ IDP + +Q W D L + + AR HGL G Sbjct: 67 YIRKKYVVIDPTIRFLGHAQRGFRWRDTLVAFRSDPHRKRMESMMIEARNHGLFDGYIFP 126 Query: 123 LMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLND-----EIVMTPE 177 + +G L+ R + + EL L + + L+ L D E+V E Sbjct: 127 VHGRRGLMGNLTVG---GRVVDLSPVELSL-FDAIAKRLFWKLLELTDPEIMAELVSRVE 182 Query: 178 MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAAT 237 + ++RE E L + A+G TS +I +L IS +TV+++ +Q+K+ A N+ V A Sbjct: 183 VQMTRREMEALHYLADGMTSNDIGKVLDISSHTVDWYMNGIQEKLKAKNRHHVVALAFRL 242 Query: 238 GLI 240 GLI Sbjct: 243 GLI 245 >UniRef50_A5EUQ4 Transcriptional regulator, LuxR family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EUQ4_BRASB Length = 243 Score = 180 bits (458), Expect = 3e-44, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 96/240 (40%), Gaps = 16/240 (6%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSL-CVRHPVPFTRPKVAFYTNYPEAWVS 69 + T E+ E A L + +++ R P ++YP++W S Sbjct: 9 DEFVDCLHSAHTEEDFRRVAERTAHALGFRWFAYFGHRANGPK------LISSYPKSWTS 62 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWN-----DDLFSEAQPLWEAARAHGLRRGVTQYLM 124 +Y + + IDPVL + +W+ + + L++ A + +R G+T + Sbjct: 63 HYFREGYDNIDPVLQEPRNTSRMFLWDGREARSAKSPKERRLFDDALSFKIRTGLTVRIP 122 Query: 125 LPNRALGFLSFS---RCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPE-MNF 180 + + R + I + + L+M L + ++ R+ + Sbjct: 123 SSQNQFAAFTLAADDRSLGLDRFIETSQDMLEMVGLTYHAHVSAARIGRTPPDGQQGSPL 182 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 ++RE++ L W ++GKT +IA +L +S V FH N ++ + A A GL+ Sbjct: 183 TQRERQCLAWISDGKTMQDIAELLGVSPRGVKFHLDNARRNLAALTLPHAVALAFRQGLL 242 >UniRef50_A4JQY4 Response regulator receiver protein n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JQY4_BURVG Length = 260 Score = 180 bits (458), Expect = 3e-44, Method: Composition-based stats. Identities = 60/239 (25%), Positives = 102/239 (42%), Gaps = 20/239 (8%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKV-----AFYTNYPEAW 67 +L F + + + L + Y++ R + R + A T+YP W Sbjct: 30 ILSLFTDAKDISSLSDSLGDAVLPLGFPCYAVT-RIALTCYRSRPSISMEAICTHYPNNW 88 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWND--DLFSEAQPLWEAARAHGLRRGVTQYLML 125 V +Y N+ A+DPV S G W D DL + + A GL+ G++ + Sbjct: 89 VQHYLQHNYGAVDPVHRAAFTSSGPYRWADITDLSQNERHVLAEACDAGLKNGLSIPIRE 148 Query: 126 PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMN----FS 181 ++ ++ S S+R +L + L RL + + P N S Sbjct: 149 IGGSILLINLSGPSSRINTGTKRQL--------ASVISNLFRLELDRLAPPHPNEFIQLS 200 Query: 182 KREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 R+++ L W A+GKTS++I MIL IS +TV +H + +N ++ A A+ GL+ Sbjct: 201 PRQRQCLSWVAQGKTSSDICMILKISRHTVEYHITEAMRVLNVNSRIAAAVIASNYGLL 259 >UniRef50_Q8KW81 RC109 n=1 Tax=Ruegeria sp. PR1b RepID=Q8KW81_9RHOB Length = 258 Score = 180 bits (457), Expect = 4e-44, Method: Composition-based stats. Identities = 49/232 (21%), Positives = 86/232 (37%), Gaps = 4/232 (1%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQ 72 + +F R + +EV + + T Y + W +Y Sbjct: 22 ISEKFSRFSSLKEVSDFLASGLGDYGISDVTYYTPKSKVKGGGAGRLITTYSQDWQDHYF 81 Query: 73 AKNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGLRR-GVTQYLMLPNRA 129 ++ DPV+ S + W+ D + + ++ AR G+ GV + Sbjct: 82 EMSYQDKDPVIEMGQQSFCPIDWSILKDRCGDTKKMFGEAREFGVSDRGVVIPMRGHLGE 141 Query: 130 LGFLSFSRC-SAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEIL 188 + +S + E + + +++ L+ E + REK++L Sbjct: 142 ITLISMTSDLGGSEWVKYLSAHKSEFVNFAFCLHGSILSLSANTGGKEEPRLTVREKQVL 201 Query: 189 RWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +W A GKTS E AMIL +SE T+ + K+ A K C A + GLI Sbjct: 202 QWAAFGKTSWETAMILELSERTIETYIGKAVAKLEASTKAHAVCKALSLGLI 253 >UniRef50_B1K7Y6 Transcriptional regulator, LuxR family n=3 Tax=Burkholderia cepacia complex RepID=B1K7Y6_BURCC Length = 321 Score = 180 bits (457), Expect = 4e-44, Method: Composition-based stats. Identities = 54/224 (24%), Positives = 92/224 (41%), Gaps = 11/224 (4%) Query: 24 EEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVA----FYTNYPEAWVSYYQAKNFLAI 79 + + L + +++ + YP+ WV++Y +++ + Sbjct: 100 SSLLKLFGDVSASLGFPRFAISRVSRRHAGNGRAMSVETLCARYPDHWVAHYAQRDYGPV 159 Query: 80 DPVLNPENFSQGHLMWND--DLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSR 137 DPV W D L Q + AR GL GV+ L N + ++ + Sbjct: 160 DPVHRMAFARATPYRWADIRGLNRIEQRVLGEARDAGLTSGVSIPLREANGDILLVNLAS 219 Query: 138 CSAREIPILSDELQLKMQLLV-RESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKT 196 S P + E+ +++ L+ L RL P + S R++E L W A GK+ Sbjct: 220 PS----PEIKTEVHMRLASLIGALFHQELHRLMKPHRPEPALELSPRQQECLAWVARGKS 275 Query: 197 SAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 S IA I+ IS +TV++H K + ++T A +A TGLI Sbjct: 276 SWAIAAIVGISPHTVDYHIAEAMKILGINSRTAAAVHAVTTGLI 319 >UniRef50_B0M190 AHL-dependent transcriptional regulator n=2 Tax=Gluconacetobacter RepID=B0M190_9PROT Length = 236 Score = 179 bits (455), Expect = 6e-44, Method: Composition-based stats. Identities = 51/229 (22%), Positives = 97/229 (42%), Gaps = 8/229 (3%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQA 73 L + T ++ + + ++ + + + + YP WV++Y Sbjct: 12 LHDLENAATKHDLLSIYLDAVLSVGNVHVTIVELNRIEDPKEN-FIHVGYPTEWVNFYIE 70 Query: 74 KNFLAIDPVLNPENFSQGHLMWND--DLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALG 131 N++ DP++ F W++ ++ + + G+++G+T + +R + Sbjct: 71 NNYIVSDPIIKKSRFMSHPYFWHEIKNINKAEKKIIRDVSEFGIKKGLTIPVHTHDRVIY 130 Query: 132 FLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWT 191 + F+ + E++L ++ L + +L DE + REKE L WT Sbjct: 131 AICFAFTDKN----IDREIELYLRALSNFFITGYKKL-DEPADMSLPILTPREKECLTWT 185 Query: 192 AEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 A+GK+S E MI+ +SE TVNFH N K+ N+ A GLI Sbjct: 186 AKGKSSWETGMIVGVSERTVNFHINNALLKLKCTNRIMGVVRAICAGLI 234 >UniRef50_Q9L6U7 Acylhomoserine lactone dependent transcriptional activator n=2 Tax=Pseudomonas RepID=Q9L6U7_PSEFL Length = 242 Score = 179 bits (455), Expect = 6e-44, Method: Composition-based stats. Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 13/210 (6%) Query: 39 YDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDD 98 Y Y++ V +NYP W+ Y+ N+ IDP+++ S W+D Sbjct: 38 YAYFAAPRNREVA-----PLIVSNYPARWLKAYKNANYHLIDPIIHHGLKSCAPFSWSDA 92 Query: 99 L----FSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRC---SAREIPILSDELQ 151 L ++ L+ + + + G T L LS + E + + Sbjct: 93 LQAAPCERSRELFRRSSQYRICTGATFTLHDAGGMFSSLSLCNSGPQAEFERRMADQQGH 152 Query: 152 LKMQLLVRESLMALMRLNDEIVMTPEMN-FSKREKEILRWTAEGKTSAEIAMILSISENT 210 L+M L+ + +R DE+ P+ S RE +L+W GK EIA+I +ISE T Sbjct: 153 LQMALIRFHGRLLSLRAMDELFPEPQTGPLSARELGVLKWVMMGKAYREIAVICAISERT 212 Query: 211 VNFHQKNMQKKINAPNKTQVACYAAATGLI 240 V FH N+ K+ N Q A G++ Sbjct: 213 VKFHMSNISGKLQVCNAKQAVYEAQRQGIL 242 >UniRef50_A5EJ34 Putative transcriptional activator n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EJ34_BRASB Length = 213 Score = 179 bits (455), Expect = 7e-44, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 84/210 (40%), Gaps = 6/210 (2%) Query: 36 QLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMW 95 Q + ++ P T YP AWV Y+A + IDPV+ + W Sbjct: 3 QYGFPCFAYLSFAPR-GDEDDALAITTYPSAWVEQYRANRYDRIDPVIARSVATTLPFAW 61 Query: 96 N----DDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSARE-IPILSDEL 150 + D L + + E A +R GVT + + L+ + C AR + Sbjct: 62 STDQFDALNNRQKWFLEEASEFEIRHGVTIPIHDRQGKVATLTLAACEARSAFEAQISKY 121 Query: 151 QLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENT 210 + ++ L+ L + ++RE+ L+W A GK++ + A I+++S T Sbjct: 122 RHELHLIAIYLYARLRDVTPTPASPLRPCLTQRERICLQWAARGKSALDTAEIINVSRRT 181 Query: 211 VNFHQKNMQKKINAPNKTQVACYAAATGLI 240 V FH +N ++K+ Q A +I Sbjct: 182 VVFHTQNAKRKLGVATVQQAVAKGLAYDII 211 >UniRef50_Q07P69 Transcriptional regulator, LuxR family n=2 Tax=Bradyrhizobiaceae RepID=Q07P69_RHOP5 Length = 246 Score = 179 bits (455), Expect = 7e-44, Method: Composition-based stats. Identities = 47/234 (20%), Positives = 81/234 (34%), Gaps = 10/234 (4%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 T + + T IE ++ + + ++ +P+ W Y Sbjct: 16 TFVEELSTLTTISAAIDFIEKGFCAYGFETIIVTGIPNHKQSFSQMVMAKRWPDEWFKLY 75 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWNDDLF-----SEAQPLWEAARAHGLRRGVTQYLMLP 126 N+ DPV+ S W+D + A + + A + RG + Sbjct: 76 TQNNYHRDDPVVRHLRKSFNPFEWSDAPYSRRNEPRAAAVMDRAADFRMSRGFIVPVHGL 135 Query: 127 NRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKE 186 +S + L+ + + L+ + + L P + RE E Sbjct: 136 AGYEAAVSL----GGDHIDLNPRSKPALHLMAMYAFDRIRSLVSPANDAPP-RLTHRECE 190 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L WTA+GK++ EI IL I++ T H +K+ A NKT A LI Sbjct: 191 TLNWTAQGKSAWEIGEILQIAQRTAEEHLATAARKLGAVNKTHAVAIAIRQKLI 244 >UniRef50_Q21BG2 Transcriptional regulator, LuxR family n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q21BG2_RHOPB Length = 245 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 55/242 (22%), Positives = 93/242 (38%), Gaps = 11/242 (4%) Query: 5 DFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTR-PKVAFYTNY 63 F + RFQ + + + A Y + + + K ++ Sbjct: 7 RHFDRALAAIERFQTTTSPRALIDAVRDAAAAYGYRSFVIAAAPKLACNAFDKRVLLRHW 66 Query: 64 PEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQP-----LWEAARAHGLRRG 118 PEAW Y N+ DP+ W+D + + + AA + +RRG Sbjct: 67 PEAWFGQYLQDNYQDHDPIAAHARQQTRAFCWSDAPWDRSDKKTAAVMDCAAHDYDMRRG 126 Query: 119 VTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEM 178 + +SF P + M+L+ ++ LM + E + Sbjct: 127 FCVPIFGMRGYEAAISFGGPEIDASPAAT----AAMELIAIYAMNQLMTMR-EPPARRQT 181 Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 S RE+E++ W A GKT+ + A IL+IS +TVN H + +K++A KTQ + G Sbjct: 182 TLSPREREVVAWAAVGKTAWDTARILAISTDTVNKHMASAMRKLDACTKTQAVVESIRRG 241 Query: 239 LI 240 I Sbjct: 242 EI 243 >UniRef50_A4U2G3 Transcriptional activator protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U2G3_9PROT Length = 237 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 12/239 (5%) Query: 8 SWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAW 67 SW M +E + A+ D+++ P P YP W Sbjct: 3 SWISEMTEELLWVEDISSAQDSLRRLAKLANVDFFAYGNSRPG-LENPYWD--ATYPTEW 59 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWN------DDLFSEAQPLWEAARAHGLRRGVTQ 121 + +Y A + IDPV+ S W + E + L+ A +G+R G T Sbjct: 60 MEHYFANRYQFIDPVVLEAQRSHLPFAWRFLLNRPGAMSPEQKLLFAEAAKYGIRDGFTI 119 Query: 122 YLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFS 181 N + +SF+ S E+ ++ +Q +++LL A+ RL + V P+ S Sbjct: 120 PFHSDNGCIAAMSFAFRSRAEMEHFAN-MQPRLKLLALYYHTAIERLLE--VEIPDDELS 176 Query: 182 KREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E++ L + A+G++ EI+ +L E+ V ++ + K+ A Q A A GLI Sbjct: 177 AMERQCLTFLADGRSLWEISGLLHRPESDVTSSLRSARDKLGAATTAQAVHKAIAEGLI 235 >UniRef50_Q03316 Regulatory protein rhiR n=2 Tax=Rhizobium leguminosarum bv. viciae RepID=RHIR_RHILV Length = 247 Score = 176 bits (448), Expect = 4e-43, Method: Composition-based stats. Identities = 50/235 (21%), Positives = 90/235 (38%), Gaps = 8/235 (3%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTR-PKVAFYTNYPEAWVSY 70 L ++ ++V +Q + Y+++ P P R N+ W Sbjct: 14 DFLSESASAKSKDDVLLLFGKISQYFGFSYFAIS-GIPSPIERIDSYFVLGNWSVGWFDR 72 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWNDDLFSE-----AQPLWEAARAHGLRRGVTQYLML 125 Y+ N++ DP+++ +W++ L + ++ + + AR L G + L Sbjct: 73 YRENNYVHADPIVHLSKTCDHAFVWSEALRDQKLDRQSRRVMDEAREFKLIDGFSVPLHT 132 Query: 126 PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREK 185 +SF L L M L A + + + + RE+ Sbjct: 133 AAGFQSIVSFGAEKVELSTCDRSALYL-MAAYAHSLLRAQIGNDASRKIQALPMITTRER 191 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 EI+ W A GKT+ EIA IL S T+ N+Q+K+N N Q+ + +I Sbjct: 192 EIIHWCAAGKTAIEIATILGRSHRTIQNVILNIQRKLNVVNTPQMIAESFRLRII 246 >UniRef50_D2U307 Quorum-sensing transcriptional activator n=1 Tax=Arsenophonus nasoniae RepID=D2U307_9ENTR Length = 257 Score = 176 bits (448), Expect = 4e-43, Method: Composition-based stats. Identities = 63/218 (28%), Positives = 94/218 (43%), Gaps = 18/218 (8%) Query: 36 QLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMW 95 + Y Y L R+P ++ TNYP+ WV Y+ +N+ IDPV+ W Sbjct: 40 EFRYAYIILNKRNP-----AELFAITNYPDQWVEIYKERNYQQIDPVVIFALNRVSPFEW 94 Query: 96 NDDLFSEA----QPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDEL- 150 ++ L + +++ ++ + + G T L N L LS S+ + I Sbjct: 95 DESLSINSNVDFSKIFDISKDYNVVNGYTFVLHDYNNRLAMLSIMMVSSEVVEIKKKIKE 154 Query: 151 ---QLKMQLL-VRESLMALMR----LNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAM 202 L M LL V E + +L R N + + + FS RE EIL W + GKT +EIA Sbjct: 155 HKNDLHMLLLDVHEKITSLYREMIRQNYQNPASGKECFSPRENEILYWASMGKTYSEIAT 214 Query: 203 ILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 IL I TV FH ++ KK+ N LI Sbjct: 215 ILGIKLGTVKFHIGSVVKKLGVMNAKHAIRLGVELQLI 252 >UniRef50_Q4ZW02 Regulatory protein, LuxR:Autoinducer-binding n=9 Tax=Pseudomonas syringae group RepID=Q4ZW02_PSEU2 Length = 247 Score = 176 bits (447), Expect = 5e-43, Method: Composition-based stats. Identities = 61/234 (26%), Positives = 97/234 (41%), Gaps = 30/234 (12%) Query: 25 EVYHEIELQAQQLE---YDYYSLCVRHPVPFTRP-KVAFYTNYPEAWVSYYQAKNFLAID 80 ++ + E ++ Y Y+S P TR K +NYP++W+ Y A N+ ID Sbjct: 26 QLIEDFENDLHRIGDFTYAYFS------SPKTRTVKPVILSNYPDSWLKSYIASNYHLID 79 Query: 81 PVLNPENFSQGHLMWNDDLFS----EAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFS 136 P++ S W + + E + + + L G T L + LS Sbjct: 80 PIIKHAWHSITPFFWREARHAIQGVETDDFLKRSAKYQLSSGATFTLHDASGLFAALSL- 138 Query: 137 RCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMN----------FSKREKE 186 C+AR+ ++ K + M+L+R +D + T + S RE Sbjct: 139 -CNARQQTDFDQRIRDK----AADIQMSLIRFHDRLTKTQAPHELFPQPTRCKLSSREIG 193 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +L+W A GK +EIA I SISE TV FH N+ K+ Q A G++ Sbjct: 194 VLKWVAMGKAYSEIAEIFSISERTVKFHMSNVSSKLEVRTAKQAVYKAINMGMV 247 >UniRef50_Q2NS60 Transcriptional activator n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NS60_SODGM Length = 240 Score = 176 bits (446), Expect = 6e-43, Method: Composition-based stats. Identities = 53/210 (25%), Positives = 86/210 (40%), Gaps = 14/210 (6%) Query: 39 YDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDD 98 + Y+ + P ++YP W++ Y+ + IDPV+ W ++ Sbjct: 36 FAYFMMNKDDGQPA-----FMISDYPAGWLNQYRNYGYQKIDPVMLIACRKFTPFSWKNN 90 Query: 99 LFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREI--PILSDELQLKMQL 156 Q ++ + + L G T L P+ L L+ S+ + I+ E K Q+ Sbjct: 91 PNMPDQNFYKMSSDYALDNGYTFTLHDPDNNLATLTISQMKQNAVFYDIIEKEKD-KFQM 149 Query: 157 LVRESLMALMRLND------EIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENT 210 L+ + ++R D S REKE+L W + GKT EI+ ILSI E T Sbjct: 150 LLITTHEKVIRFFDARKEQGSESEEEPCRLSPREKEVLFWASVGKTYNEISTILSIREGT 209 Query: 211 VNFHQKNMQKKINAPNKTQVACYAAATGLI 240 V FH +N+ K+ N A L+ Sbjct: 210 VKFHIRNIINKLGVANAKHAITRAMELKLL 239 >UniRef50_Q46751 Transcriptional activator protein carR n=4 Tax=Enterobacteriaceae RepID=CARR_PECCC Length = 244 Score = 176 bits (446), Expect = 7e-43, Method: Composition-based stats. Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 14/228 (6%) Query: 24 EEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVL 83 E++ I+ + + + ++S + ++P +NYPEAW+ Y K DP++ Sbjct: 3 HEIHSFIKRKLKGVGDVWFSYFMMSKNSTSQP--YIISNYPEAWMKEYIKKEMFLSDPII 60 Query: 84 NPENFSQGHLMWNDD----LFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSR-- 137 W+D+ L ++ Q ++ ++ H + G T L + + LS + Sbjct: 61 VASLARITPFSWDDNDIVTLRAKNQDVFISSVQHDISSGYTFVLHDHDNNVATLSIANHL 120 Query: 138 -CSAREIPILSDELQLKMQLL-VRESLMALMRLNDEIVMTPEMN----FSKREKEILRWT 191 + E + + E L+M L+ V E +MA R ++ P+ + S RE E+L Sbjct: 121 EDANFEKCMKNHENDLQMLLVNVHEKVMAYQRAINDQDNPPDNSRNALLSPRETEVLFLV 180 Query: 192 AEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 + G+T E++ IL ISE TV FH N +K++ N A L Sbjct: 181 SSGRTYKEVSRILGISEVTVKFHINNSVRKLDVINSRHAITKALELNL 228 >UniRef50_Q3K6H8 LuxR family regulatory protein n=1 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3K6H8_PSEPF Length = 235 Score = 176 bits (446), Expect = 7e-43, Method: Composition-based stats. Identities = 63/235 (26%), Positives = 104/235 (44%), Gaps = 6/235 (2%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHP-VPFTRPKVAFYTNYPEAW 67 W+ + + R + E + + A + + + + V P P +P N+ +AW Sbjct: 4 WKEYQIKQLTRAKEIESAFPILRTFANNIGFQFCGIQVSRPESPSFKP--FHINNFTKAW 61 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQ-YLMLP 126 N+ DP+ + + S +WN FS+A +W A R HG+ G +Q YL Sbjct: 62 NEE-YENNYSEEDPITSYCHQSMLPFLWNRKAFSKAPQMWNALRNHGMEHGWSQSYLNEE 120 Query: 127 NRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR-LNDEIVMTPEMNFSKREK 185 N +S +R + + + M + + + L P + S RE Sbjct: 121 NDLCCTISLARPQSEIFALELYDQYGVMHFITQHLSELFVHALPPVPAKPPPVRLSTREL 180 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 EI+R A GKT+ EI IL+++E TVN+H KN+ K+NA NK A+ G + Sbjct: 181 EIVRLCAYGKTAWEIGQILNVAERTVNYHIKNLIVKLNACNKMSAIVKASKLGFL 235 >UniRef50_Q7CWE0 Transcriptional regulator, LuxR family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7CWE0_AGRT5 Length = 245 Score = 175 bits (445), Expect = 8e-43, Method: Composition-based stats. Identities = 53/240 (22%), Positives = 96/240 (40%), Gaps = 12/240 (5%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 + + +A+ V E ++ ++Y+ + R + P+ W+ Y Sbjct: 6 QFISACSQAGSADRVRSEFAKLIREYGFEYFLVSRRMTGELASAGQILAEHLPDGWLEVY 65 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWNDDL--------FSEAQPLWEAARAHGLRRGVTQYL 123 +AK + +DPV W + L A + A +GL+ G + Sbjct: 66 RAKKYNLVDPVRKVIGMVHKPFQWKEALEGLPRAMHRKRASVFFHDAGRYGLQGGYAFPV 125 Query: 124 MLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMN---F 180 +G + F R++P L EL V L+ L P+++ Sbjct: 126 HGRAGFIGAV-FIGGPDRQLPSLHVELLDAATRAVFWRLLDLSGQAHGFSNAPDVSALEL 184 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 ++RE E+L A+G TS EI LSIS +TV+++ +Q++ +A N+ A GL+ Sbjct: 185 TRREMEVLALMADGMTSTEIGRQLSISNHTVDWYINGIQRRFSAKNRQHTVALAFRHGLL 244 >UniRef50_B9TKR4 Transcriptional activator protein ahyR/asaR, putative n=1 Tax=Ricinus communis RepID=B9TKR4_RICCO Length = 234 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 51/234 (21%), Positives = 87/234 (37%), Gaps = 8/234 (3%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 + T + V + + Y + P F+ ++P W+ Sbjct: 3 DEFAAALEACATIDAVKALFKRRIAAHGYTASACGAFLPADKGPEPHFFFQDWPPDWLEL 62 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWNDD-----LFSEAQPLWEAARAHGLRRGVTQYLML 125 Y +NF+A D + W + L Q +W+ G G++ + Sbjct: 63 YVNRNFVAADYGVAEARRRIAPFTWREAKAERTLSRAEQDIWDTVVEWGWTDGLSVPIHG 122 Query: 126 PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREK 185 P ++ + P L +LQ ++ L E AL L V P+ + RE Sbjct: 123 PGGYFAIVTMAGKEQPMPPALRGKLQ-QLAFLTHERCRALTGLA--PVTDPQATLTHREL 179 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 E LRW A GKT +IA +L +S+ T H ++K+ A ++Q +GL Sbjct: 180 ECLRWVAAGKTDLQIARLLGVSQTTARTHIDQARRKLGARTRSQAVARLVLSGL 233 >UniRef50_A8LML6 Putative transcriptional regulator n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LML6_DINSH Length = 243 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 57/242 (23%), Positives = 98/242 (40%), Gaps = 14/242 (5%) Query: 7 FSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHP---VPFTRPKVAFYTNY 63 + T + R ET +++ + A D S VP + V F + Sbjct: 1 MTRLETFMDGVSRAETPAQIWDAVLPFAHSFGIDKVSYHNTPAFGAVPGSETAV-FARGF 59 Query: 64 PEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRG 118 PE+W+ Y + +DP+ + W+D L + + GL G Sbjct: 60 PESWLCDYVNERLYEVDPIPAYAAHATEPFRWSDIAKLTPLTAPETDFLKRLLQQGLGDG 119 Query: 119 VTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEM 178 + + PN G++ S+ P LS ++Q + + + L V TPE Sbjct: 120 LALQVFGPNMRNGYVGVGFASSD--PDLSGGDIRELQAAAQAAHLRYCTLV--PVATPEA 175 Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 + RE+E+L W A GK+++ IA IL +S +TV+ + + K+ ++T A G Sbjct: 176 -LTPREREVLGWIARGKSNSVIAEILGVSPHTVDTLVRRIYGKLEVADRTTAAIRGIGAG 234 Query: 239 LI 240 LI Sbjct: 235 LI 236 >UniRef50_Q6LB43 Probable TraR n=1 Tax=Oligotropha carboxidovorans OM5 RepID=Q6LB43_OLICO Length = 239 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 83/233 (35%), Gaps = 12/233 (5%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYS-LCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 ++ + + + + +D ++ L VR + T YP W Y Sbjct: 14 LIDALELARDQRMIKQALRHFCESNGFDRFAHLNVRST------ETCVLTTYPAEWQRLY 67 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWNDD----LFSEAQPLWEAARAHGLRRGVTQYLMLPN 127 K + IDPV+ + W+ D + + + A G+R G++ + P Sbjct: 68 FDKKYALIDPVVISAKRNMEIFSWSQDDASKYSKDVKRFFREADDFGIRSGLSIPIRTPF 127 Query: 128 RALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEI 187 L+ + R + + ++ V + L R+ + + RE Sbjct: 128 GGTAILTLAS-EQRRVDFAGIQDTVRAMNAVAFAHAHLNRVAAAPCRRTKYELTPREVTC 186 Query: 188 LRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L W + GKT +EIA +L I TV + ++K+ N A LI Sbjct: 187 LTWASLGKTMSEIADLLQIDVRTVRNYLDLAREKLGGSNIAHAVRLAVMQHLI 239 >UniRef50_A3UFL6 Transcriptional regulatory protein, LuxR family protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UFL6_9RHOB Length = 241 Score = 175 bits (443), Expect = 1e-42, Method: Composition-based stats. Identities = 60/237 (25%), Positives = 95/237 (40%), Gaps = 12/237 (5%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAF---YTNYPEAWV 68 + L + ++ E + H + + + + V P PF +F Y +PEA Sbjct: 7 SFLEQSADSDSNEALCHAFKAFVETFGVEAFGYQVL-PSPFDAADTSFDFEYNTFPEAMQ 65 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYL 123 Y + DPV + + W D +Q L+E R G G T + Sbjct: 66 DVYFEERLYDHDPVTSRAATALQPQFWFDVEQTTPGTRFSQRLFELLRQSGFVDGFTIPV 125 Query: 124 MLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKR 183 P G +F C +QL+M L + L + + + + S+R Sbjct: 126 FGP---YGLAAFVACGRFSGAFNLTAIQLRMLQLGCQELYSRTIMLRDYDAPAPPHLSER 182 Query: 184 EKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E EIL+W A GK++A IA IL +S +TV+ + K+NA N+ A GLI Sbjct: 183 EVEILQWLARGKSNAVIAAILGVSPHTVDTIMRRAFVKLNASNRIAAVLKALRVGLI 239 >UniRef50_B7T9X4 LuxR family transcriptional regulator n=1 Tax=uncultured proteobacterium RepID=B7T9X4_9PROT Length = 277 Score = 175 bits (443), Expect = 1e-42, Method: Composition-based stats. Identities = 52/241 (21%), Positives = 95/241 (39%), Gaps = 13/241 (5%) Query: 5 DFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKV-AFYTNY 63 + F + + + + + + + + + L + +++ C H P P+ +Y Sbjct: 2 NQFEVAQGFIEQCRAGAPVDVLARDFQRCTEALGFRHFA-CCSHVDPLKPPRRAVMLHSY 60 Query: 64 PEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWN-----DDLFSEAQPLWEAARAHGLRRG 118 P+ W + IDPV + S W+ D+L Q L+ A +GL RG Sbjct: 61 PKEWAQLFSELELFDIDPVFLHASRSLVPFFWDTEAFNDELSPPQQELFNEAGRYGLTRG 120 Query: 119 VTQYLML---PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT 175 T + P S S P +QL L + + + V Sbjct: 121 YTVPIHSVDAPRDFRASCSVVPDSESLEPAAYQAVQLMAFYLYDTASKDAQQKDPPPVQQ 180 Query: 176 PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 P S+RE++ L A+GK+ + IL +SE TV+ H +N ++++ + Q +A Sbjct: 181 P---LSRRERQCLELAAQGKSDWVSSRILGLSERTVHNHVENAKRRLQVATRMQAVMHAL 237 Query: 236 A 236 A Sbjct: 238 A 238 >UniRef50_Q1GPX8 Transcriptional regulator, LuxR family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GPX8_SPHAL Length = 250 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 50/227 (22%), Positives = 91/227 (40%), Gaps = 8/227 (3%) Query: 19 RMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLA 78 + + ++ + + + +D ++L + +YP +W Y N A Sbjct: 15 TASSIDHLHEALTRATRDMGFDRFALSLEIGCGADSSTSLLIHDYPASWADVYIGFNLAA 74 Query: 79 IDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFL 133 DPV S W + + + +E R HGL G T LP G Sbjct: 75 SDPVRRAAERSVLGFGWRNILDLVPMTEIEKTTFETGRRHGLADGFTVPRHLPGDVTGSC 134 Query: 134 SFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAE 193 SF + IP + + ++L ++ + +L+ + + + R+++ + W A Sbjct: 135 SFVTGLGKSIP---HAMLIVAEMLGAMAIASARQLSGWTSRSVQPRLTDRQRDCVLWAAR 191 Query: 194 GKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 GKT EI+ IL IS TV H K+ +++ + + YA GLI Sbjct: 192 GKTDWEISRILDISHETVIQHLKDARERYETHKRASLILYALYDGLI 238 >UniRef50_C5AK35 Autoinducer-binding domain protein n=2 Tax=Burkholderia RepID=C5AK35_BURGB Length = 273 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 1/212 (0%) Query: 18 QRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFL 77 +R +T E + + A++L + Y +P + P+ N+P AW A Sbjct: 49 ERGDTPESLLDAVLPIARRLGFAYLEYFFNTSLPVSAPRKLVIGNFPPAWSRREGADEVS 108 Query: 78 AIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSR 137 +P++ S + W++ F+ G+ G +Q + G L+ +R Sbjct: 109 EANPIIARCKSSMMPMAWDEASFASHPDFRAMLARAGIGGGWSQLVRDGAGNWGVLTVAR 168 Query: 138 CSAREIPILSDELQLKMQLLVRESLMAL-MRLNDEIVMTPEMNFSKREKEILRWTAEGKT 196 + R + E + ++ L L L + + ++ EK ILRWT +GKT Sbjct: 169 TACRYAGAMEVEAEAQLLWLAHIVHSRLCQMLRPPMTGANRVLLTEMEKTILRWTVDGKT 228 Query: 197 SAEIAMILSISENTVNFHQKNMQKKINAPNKT 228 S E+A IL +S TVNFH +N+ K+N NKT Sbjct: 229 SGELAEILQVSARTVNFHVQNILAKMNTCNKT 260 >UniRef50_Q1QFH8 Transcriptional regulator, LuxR family n=3 Tax=Bradyrhizobiaceae RepID=Q1QFH8_NITHX Length = 231 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 52/237 (21%), Positives = 93/237 (39%), Gaps = 17/237 (7%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYD--YYSLCVRHPVPFTR-PKVAFYTNYPEAWVSY 70 + ++ TA E+ + A + + + + P P + +P W+ Sbjct: 1 MEAVEQTRTAAEIEDCLLGLAAEFGFTGLFGGIVPTRPAPLAELRSRILFQRFPAQWLDR 60 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYLML 125 Y K ++ DP++ + W++ S + + A GLR G + Sbjct: 61 YSRKGYVFRDPIIQHLFHERTPFTWHEGYKSCPQRSNVRLIQGEAAEFGLRDGYVVPIST 120 Query: 126 PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMN--FSKR 183 + + +S S +P +D + +L + AL R I +N + R Sbjct: 121 IDGEI--VSLSFGGPGTLPASAD-----LSVLNFAASYALGRHLHRIATWRRVNSNLTAR 173 Query: 184 EKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E + L W EGKT+ EI+ IL IS++TV H + K+ A +K A T L+ Sbjct: 174 EWDCLLWAGEGKTNWEISAILGISKSTVTKHIMAARAKLGAVSKAHAIAMAIRTKLL 230 >UniRef50_Q39VH7 Transcriptional regulator, LuxR family n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39VH7_GEOMG Length = 246 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 9/234 (3%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYD--YYSLCVRHPVPFTRPKVAFYTNYPEAWVS 69 ++ + E + L +D + +YPE W+S Sbjct: 14 ELIDASRSCADMERLKRLFHSLNDLLSFDMAVCGTARFDGAGTMNAQQIINISYPEEWLS 73 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWNDDLFS--EAQPLWEAARAHGLRRGVTQYLMLPN 127 Y +F A+DPV+ W++ QP A G+R+G + ++ N Sbjct: 74 LYAEHDFAAVDPVVRAHIADFSAKPWSEAYLKWGRPQPFLSLAEDFGIRKGYSFGVLSSN 133 Query: 128 RALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR-LNDEIVMTPEMNFSKREKE 186 + FS C + + P+ + ++ + +L AL R + ++ + RE E Sbjct: 134 DRTASI-FSLCVSEKYPVHTPQI---LDILAPYFHEALRRTVQTDLPSACLATLTPREIE 189 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 ++ W A GK EI++IL ISE TV FH + +K+ A N++ A +TGLI Sbjct: 190 VISWLANGKNYWEISVILGISERTVKFHTSTIVQKLGAANRSHAVAIAISTGLI 243 >UniRef50_A3T328 Autoinducer-binding transcriptional regulator LuxR n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3T328_9RHOB Length = 269 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 4/189 (2%) Query: 56 KVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLF--SEAQPLWEAARAH 113 + T Y WV +Y + + +DPVL+ + S + W ++ + A+ + Sbjct: 79 EHILITTYSTTWVEHYFSLKYQDVDPVLHAGSRSLLPVDWGHLSTTGETSRNFFGEAKEY 138 Query: 114 GLRR-GVTQYLMLPNRALGFLSF-SRCSAREIPILSDELQLKMQLLVRESLMALMRLNDE 171 G+ G+T + +S S AR+ + E+ ++ R Sbjct: 139 GIGETGLTIPVRGMLGEEAMISLNSDLRARDWELFCREMISDFTYFAHLLHDSVTRSRIH 198 Query: 172 IVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVA 231 T +KRE ++LRW A GKT+ E +IL ++E TV+F+ N K+ KTQ Sbjct: 199 QHETDHPQLTKREAQVLRWAARGKTAWETGIILGLTEKTVSFYLGNACAKLKVATKTQAV 258 Query: 232 CYAAATGLI 240 +A LI Sbjct: 259 AFAVKERLI 267 >UniRef50_Q2NWB5 Transcriptional activator protein n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NWB5_SODGM Length = 245 Score = 173 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 56/235 (23%), Positives = 87/235 (37%), Gaps = 15/235 (6%) Query: 15 LRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAK 74 E + + HE+ Q + + Y+ K Y+NYP+ WV Y Sbjct: 13 NGLVTAEIHDLLQHEM-NINQPIRFAYFIFNKS-----QDEKPVIYSNYPKEWVEKYMKN 66 Query: 75 NFLAIDPVLNPENFSQGHLMWNDDLFSEAQ----PLWEAARAHGLRRGVTQYLMLPNRAL 130 DPVL + W + F + + ++ + + + RG T L L Sbjct: 67 KLYKQDPVLLVASQKIMSFPWQKNYFKKTKHQKSNIFAQSSEYNITRGYTFPLHDHENNL 126 Query: 131 GFLSFSRCSARE-----IPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREK 185 LS S + I D L L + L + + E + RE Sbjct: 127 AMLSLYTESDPDQLMKCISDHEDRLYLLFLSIHNRFLAEKAQQTNTSNTKIEKRLTSREI 186 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E L W + GKT EIA+I+ I+E+TV FH N+ K++ N A L+ Sbjct: 187 EALHWASIGKTYREIAIIMGITESTVKFHIGNLIVKLDVINAKHAIKKATDLHLL 241 >UniRef50_A8GCU6 Transcriptional regulator, LuxR family n=2 Tax=Serratia RepID=A8GCU6_SERP5 Length = 238 Score = 173 bits (439), Expect = 4e-42, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 8/204 (3%) Query: 26 VYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNP 85 ++ AQ L ++Y+S V P +RPK+ N+PE ++ Y+ DPV+ Sbjct: 22 FLSQLAPCAQALGFEYFSYTVFSCYPASRPKMLIEGNFPECYLEDYRKLRVYLQDPVIEQ 81 Query: 86 ENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAR-EIP 144 + S W++ + + LW G+R G +Q + LG L+F+ S + P Sbjct: 82 AHHSTLQFYWDEHFYQDKPELWWRMAQFGIREGWSQSVKDCYGRLGILTFAGKSIPVQSP 141 Query: 145 ILSDELQLKMQLLVRESL----MALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEI 200 S + L + AL+ +NDE + + + REK+ILRW +EGKTS E Sbjct: 142 QASARNETFFLWLAQMVHKTLREALISVNDEAI---KDVLTLREKDILRWCSEGKTSEET 198 Query: 201 AMILSISENTVNFHQKNMQKKINA 224 A+++ +SE TVNFH N KK++ Sbjct: 199 ALLMGLSERTVNFHIGNSIKKLSV 222 >UniRef50_A5V2N0 Transcriptional regulator, LuxR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V2N0_SPHWW Length = 254 Score = 173 bits (438), Expect = 6e-42, Method: Composition-based stats. Identities = 51/235 (21%), Positives = 90/235 (38%), Gaps = 7/235 (2%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 + + E++ ++ I QQ + +++L + R TNYP +WV Sbjct: 16 EEVHKACEAAESSAQLSEVIAGAIQQFGFRWFALVDDGDLYKHRSGCMMLTNYPSSWVDE 75 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYLML 125 + DPV S L W+ + E RAHGL G T + Sbjct: 76 VISARLYRDDPVHAASIRSPTGLCWDRIPDVIAPTRAQLSVLERGRAHGLTTGYTVPFRI 135 Query: 126 PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREK 185 P F S +R R + + E+ AL++ V + R+ Sbjct: 136 PGERGAFFSIARPKDRSFTYSEAISAQLLGGIAFEAGRALVK--GRAVKAHGAPLTPRQI 193 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + LR A GKT E+ IL +S +T++ + + +++ ++Q+ AA G + Sbjct: 194 DCLRLIAAGKTEWEMGKILGLSPSTIHEYVEAARRRYGVKTRSQLVLAAARDGYV 248 >UniRef50_Q89V15 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89V15_BRAJA Length = 242 Score = 173 bits (438), Expect = 7e-42, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 91/236 (38%), Gaps = 12/236 (5%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYT-NYPEAWVSY 70 + +++ + + Q +DY+ P+ P+ A P ++ Sbjct: 10 DFVETVRQLPDVASILDAMSRTLGQHGFDYFCSSYVAPLSTESPREAVLAERLPAGFLDM 69 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMW------NDDLFSEAQPLWEAARAHGLRRGVTQYLM 124 Y ++ DP L + W + + A L AR G+ GV ++ Sbjct: 70 YSEAQYVWHDPALRYCRTTLQPFRWFREAPYDPEREPRAVELVRRARDFGMVDGVVIPVI 129 Query: 125 LPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKRE 184 P G + F L + + L+ + +++L + P++ S RE Sbjct: 130 SPAGRTGQVWFGGAEI----DLPERDLPALHLMALYAFDRVLKLRG-LPAAPQLALSLRE 184 Query: 185 KEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +E+L A G++S EIA L+I+ TV H K+ KK+ A +TQ A +I Sbjct: 185 REVLTLAAVGRSSDEIADALAITGRTVKAHIKSCCKKLGAATRTQAVMIAMRDRII 240 >UniRef50_B9JYA3 Transcriptional regulator protein n=1 Tax=Agrobacterium vitis S4 RepID=B9JYA3_AGRVS Length = 243 Score = 172 bits (437), Expect = 8e-42, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 91/237 (38%), Gaps = 13/237 (5%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHP---VPFTRPKVAFYTNYPEAWV 68 + L + ++ +T + + + + L +P + + ++P+ W Sbjct: 11 SFLSQIKQTDTVKNLVDLTKHATSRYGVKNIVLGFPPEIGMLPSQQMQGILLADWPDEWS 70 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYL 123 Y N DP + S+ +W+D + + + L + A+ + G T + Sbjct: 71 HLYFRDNLAFQDPAIRHIVSSEPSFVWSDFSKTLPISRDEKWLMDQAKEFFVSNGFTLPI 130 Query: 124 MLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKR 183 + + ++F+ + P + + M L+ + L + R Sbjct: 131 LSLDGRRAGVTFAGSDIDDSP----QARTGMALIASLVFARALELYGANQKQ-TTRLTPR 185 Query: 184 EKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E+E++ W A GKT EI++I +SE V H N+ K+ A +++ A LI Sbjct: 186 EREVIGWIANGKTDWEISVIFGVSEKAVTKHVGNIMMKLGAVSRSHAIAEAFRQKLI 242 >UniRef50_Q13HW9 Transcriptional regulator, LuxR family n=3 Tax=Burkholderia RepID=Q13HW9_BURXL Length = 262 Score = 172 bits (437), Expect = 8e-42, Method: Composition-based stats. Identities = 54/233 (23%), Positives = 87/233 (37%), Gaps = 9/233 (3%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY----TNYPEAWVS 69 L R + A +L + +Y + TR ++YP+ WV Sbjct: 31 LKRLACATDIPSLVESFGHAAGKLGFPHYVISRVTRSRSTRAPQTALEMIGSHYPKEWVQ 90 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWND--DLFSEAQPLWEAARAHGLRRGVTQYLMLPN 127 +YQ +++ DPV F W+D DL A GL G++ + + Sbjct: 91 HYQRRDYALTDPVHRAAFFQSAPYRWHDIIDLTKADHRFLGEASEAGLPAGLSIPVHQSD 150 Query: 128 RALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEI 187 ++ + + + S+ + L+ + L RL + + Sbjct: 151 GSVLLFNLA---GPLHSVNSEINARRACLMSAQFNFELHRLGLIHSRRAARLLTPCQIVC 207 Query: 188 LRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L W A GKTSAEI IL S TV++H K + +N +T A A GLI Sbjct: 208 LTWVARGKTSAEIGEILGCSHYTVDYHVKKAMEALNIWGRTAAAVQATVQGLI 260 >UniRef50_Q1QF64 Transcriptional regulator, LuxR family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QF64_NITHX Length = 234 Score = 172 bits (436), Expect = 9e-42, Method: Composition-based stats. Identities = 48/236 (20%), Positives = 90/236 (38%), Gaps = 13/236 (5%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 + ++ + +++ I+ +D Y+ H +T+YP W + Sbjct: 6 QGLIDAVDVAQDERSIHNAIKNFTVASGFDRYAYIHVHAG-----DGVGFTDYPVEWQNI 60 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWNDDL------FSEAQPLWEAARAHGLRRGVTQYLM 124 Y K + IDPV+ + W+ + E + + A G+R GV+ + Sbjct: 61 YLEKRYTVIDPVVTTAKRTMKMFAWSAEDPTVWRGSREIKQFYSEATDFGIRSGVSVPIR 120 Query: 125 LPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKRE 184 ++ + S R L ++ L + + L + + E++ S +E Sbjct: 121 TSYGRTAMITLA--SDRRQVELPPWDPMQAALALAYIHIHLSLASASSLKVGEVSLSAQE 178 Query: 185 KEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L W++ GK+ IA +L I TV F+ N + K+ A N Q A LI Sbjct: 179 ATSLSWSSHGKSMNVIADLLGIKPRTVQFYLDNARDKLGASNLQQAVRIAMEKKLI 234 >UniRef50_A2SMG0 Putative LuxR-family transcriptional regulator n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SMG0_METPP Length = 237 Score = 171 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 58/235 (24%), Positives = 90/235 (38%), Gaps = 7/235 (2%) Query: 13 MLLRFQ---RMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVS 69 +L FQ +E E+ A++L ++ S P + N P+A+ Sbjct: 2 LLGSFQSVLEARNRDEFRGEVVRFAKRLGFETVSAITVVDHPVGDTEFVAIDNAPDAYKD 61 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQP--LWEAARAHGLRRGVTQYLMLPN 127 + +DPV+ ++W+ + A +WEA G R G+ L +P Sbjct: 62 AIEDPKAGQLDPVMQHCKRQSVPIIWDQSTYVSAGQGSMWEAQARFGFRTGICLALHMPE 121 Query: 128 RALGFLSFSRCSAREIPILS-DELQLKMQLLVRESLMALMR-LNDEIVMTPEMNFSKREK 185 + R A L +QL + MR L E + + RE Sbjct: 122 GRHFVIGVDRDQALPKDRGEVTRLVADLQLFAVHAQDTAMRVLVPERLQLERPKLTPREL 181 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + LRWT +GKT+ E+ I+ ISE T H N K+ NK Q A GL+ Sbjct: 182 DSLRWTMDGKTAWEVGSIMGISERTAVLHINNAMHKLACTNKHQAVLKALRLGLL 236 >UniRef50_B6VM55 Similar to probable transcription regulator SdiA of Escherichia coli n=3 Tax=Photorhabdus RepID=B6VM55_PHOAA Length = 242 Score = 169 bits (429), Expect = 6e-41, Method: Composition-based stats. Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 12/238 (5%) Query: 12 TMLLRFQRMETAEE-VYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 T+ +F ++ V E+ + + +SL ++ P + +V F+ NY E+W + Sbjct: 8 TLPYKFHELDVDAHFVSEVFEIINKISGFSLFSLILKARFPISNREVYFFNNYHESWRNL 67 Query: 71 YQAKNFLAIDPVLNPENFSQGHL----MWNDDLFSEA--QPLWEAARAHGLRRGVTQYLM 124 Y + + IDP L NF +W+ D FSE+ Q LW ++ HG R G+T L Sbjct: 68 YIERKYWMIDPTL---NFRPVPPSFSKIWDLDFFSESNGQELWYVSQKHGFRSGITFGLP 124 Query: 125 LPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVM--TPEMNFSK 182 + G S + + ++ + + L + E +FS Sbjct: 125 AFSGTYGIFSVAGKDGHIDNETMYKCSGEILGVYIRIIRYLTSHTKYLQFFYVDETSFSN 184 Query: 183 REKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 RE E+LR+TA+G TS+EIA+ + ++++TV+FH N+ KK+ NK Q A G I Sbjct: 185 RELEVLRYTADGMTSSEIALTICVTKSTVDFHLMNIVKKLGCRNKFQAIAKAVLLGYI 242 >UniRef50_UPI00018738D8 transcriptional activator of quorum sensing autoinducer synthesis transcription regulator protein n=1 Tax=Pseudomonas syringae pv. tomato T1 RepID=UPI00018738D8 Length = 185 Score = 169 bits (429), Expect = 7e-41, Method: Composition-based stats. Identities = 58/181 (32%), Positives = 83/181 (45%), Gaps = 1/181 (0%) Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120 NY W YQ NF+ DP L S ++W++D F + L+ + L G Sbjct: 5 NNYDPQWNENYQIHNFVESDPTLQHGFKSNEPMLWSEDTFKDHTLLYGEMKKFNLNYGWL 64 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLND-EIVMTPEMN 179 Q + A G ++ SR + D + KM LVR + L + P Sbjct: 65 QSSWYNSAAKGVVTLSRSTEAITLKELDAKEAKMSKLVRLTHACLSEIITLSPPYNPLEK 124 Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 S RE E+L+W A+GKT I +L ++E TV H N+ +K+NA NKT A AA G+ Sbjct: 125 LSTREVEVLKWVADGKTGEVIGKVLGVTERTVTHHTVNIMQKLNATNKTAAAVKAALLGI 184 Query: 240 I 240 I Sbjct: 185 I 185 >UniRef50_A7IQ01 Autoinducer-binding domain protein n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IQ01_XANP2 Length = 233 Score = 169 bits (429), Expect = 7e-41, Method: Composition-based stats. Identities = 52/236 (22%), Positives = 95/236 (40%), Gaps = 10/236 (4%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWV 68 W + + T + + + Q L +D Y+ PV ++ +NY W Sbjct: 4 WFQRLTDVSSLACTEQALKEALAELVQDLGFDGYAYLNVQPV-----RIFAVSNYASEWQ 58 Query: 69 SYYQAKNFLAIDPVLNPENFSQ----GHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLM 124 + Y +N+ IDPV+ L + + A G+R G++ + Sbjct: 59 ARYLTQNYAMIDPVVTMAKAQMKAFAWAAAAPRSLSKPLRRFYSEASDFGIRSGISIPVR 118 Query: 125 LPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKRE 184 L L+ + + + +D Q+ V + + + + E + E++ ++ Sbjct: 119 TAFGHLSMLTLASHKPS-LNLETDIDQIAAVTAVAQLHAKMEQQDAEPTASVEIDLKAKQ 177 Query: 185 KEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L+W+AEGKT +IA I +S TVNFH N +K ++A + Q A LI Sbjct: 178 ALCLKWSAEGKTMKDIASIEGMSFATVNFHLNNARKALDAGSLAQATALATKLKLI 233 >UniRef50_Q19U14 Transcriptional activator AlpR n=1 Tax=Azospirillum lipoferum RepID=Q19U14_AZOLI Length = 234 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 53/237 (22%), Positives = 101/237 (42%), Gaps = 12/237 (5%) Query: 9 WR--RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFT---RPKVAFYTNY 63 W+ +T + + + ++ E A +L Y +Y+ P P A NY Sbjct: 2 WQAIQTFVEQAGDDTDEDALFRRFESAATELGYPFYAFGALWGDPDAIKLNPAPAVRLNY 61 Query: 64 PEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYL 123 P WV++Y + + IDPV+ ++Q + W D+L S ++ A GLR G+ L Sbjct: 62 PAEWVAHYFSTGYNKIDPVVLVAPYAQTSVTW-DELRSYRPEFFDDAATFGLRSGIAIPL 120 Query: 124 MLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKR 183 L + R I + + +++L A RL + + + + Sbjct: 121 RAIQGCY-VLCVASGDDRPI---RPKERARLELFAHGLFAAYQRLRE--LPAQDHGLTAN 174 Query: 184 EKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +++R + G ++AEI L ++ + V++ K+ +KK+ N QV A G++ Sbjct: 175 TVQVIRLSMAGLSTAEICSRLKLTMDGVHWCLKDARKKLKCANTAQVYLKAIQQGIV 231 >UniRef50_Q2K2Q3 Autoinducer transcriptional regulator protein n=15 Tax=Rhizobiales RepID=Q2K2Q3_RHIEC Length = 261 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 54/232 (23%), Positives = 95/232 (40%), Gaps = 5/232 (2%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 T F M+ A V ++ D+ + + + T YP++WVS Y Sbjct: 24 TYPDAFSAMKNAATVAAALDEFQSHYPIDFVTFHLARTIVDNVDAPFVRTTYPDSWVSRY 83 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWND-DLFSEAQPLWEAARAHGLR-RGVTQYLMLPNRA 129 +++ +DP++ Q W + D+ AQ A HG+ GV+ ++ +R Sbjct: 84 LLNDYINVDPIIREGFSRQLPFDWREIDITETAQEFMVDAELHGIGTNGVSVPIVDKSRR 143 Query: 130 LGFLSFSRCSAREIPILSDELQLK-MQLLVRESLMALMRLNDEIVMTPEMNFSKREKEIL 188 S+ S E ++ + + ++L A+ L+ E P RE E L Sbjct: 144 SLLSINSQKSDEEWTLIERQFLPEWLELGFLLHRKAVFELHGENDPVPA--LGSREIECL 201 Query: 189 RWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 W + GK S +I IL +SE+T + K+ + K+ P + +A LI Sbjct: 202 HWASRGKDSKDIGKILGLSEHTTRGYLKSARYKLGCPTLSAAIAHAVHLNLI 253 >UniRef50_C8SKW4 Transcriptional regulator, LuxR family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SKW4_9RHIZ Length = 245 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 87/234 (37%), Gaps = 8/234 (3%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 T L R + + + A + + ++ +P +PK +NYP W Sbjct: 10 ETFLERLSQSVDEADFREALAEAAARFDLLSFAYLSLPSLPSGKPK--LISNYPPRWAMQ 67 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWNDDLF-----SEAQPLWEAARAHGLRRGVTQYLML 125 Y + +DPV+ W DL+ Q L++ A +R G+T ++ Sbjct: 68 YLENQYEKLDPVILRARNGGRPFQWGSDLWGGKMSPAQQQLFDEAARFSIRCGLTIPIVD 127 Query: 126 PNRALGFLSFSRCSAREIPI-LSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKRE 184 ++F+ R + + + + + +QL+ + R + + RE Sbjct: 128 LRGRTAAVTFAADEPRPVFLRVIERYEQALQLMATCFHRCVRRKLPGDRTVDGILLTSRE 187 Query: 185 KEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 LR A G ++ IL I T+ FH +N +KK+ + Q + G Sbjct: 188 YMCLRSAARGNSAWVTGRILGIKPRTIAFHLENAKKKLGVRTQNQAIALLGSQG 241 >UniRef50_B2VEE0 Transcriptional activator protein n=1 Tax=Erwinia tasmaniensis RepID=B2VEE0_ERWT9 Length = 240 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 61/229 (26%), Positives = 92/229 (40%), Gaps = 17/229 (7%) Query: 26 VYHEIELQAQQLE-YDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLN 84 + ++E L + + + + + TNYP WV Y+ K DPV+ Sbjct: 11 ISKQLEAALSDLGEFIWAYVVLSK---KDMSCIFGVTNYPGEWVKQYREKGLQYTDPVVI 67 Query: 85 PENFSQGHLMWNDDLFSEA----QPLWEAARAHGLRRGVTQYLMLPNRALGFLSFS---- 136 W+++L + + L++ AR G+ G T L N L LSF+ Sbjct: 68 TSLNRLTPFAWDENLLAGSGFRFSKLFDRAREFGVTNGYTFVLHDYNNNLVTLSFTFTPE 127 Query: 137 -RCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEM----NFSKREKEILRWT 191 R A E I + + V E+ + L L+++ F++RE EIL W Sbjct: 128 CRAEATETFIKNKGEISLLLASVHETYLTLTSLSEKNASRSRSENASRFTERENEILYWA 187 Query: 192 AEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + GKT E AMIL I TV FH N+ KK+ N LI Sbjct: 188 SVGKTYPETAMILGIKTCTVKFHMSNIVKKLGVANARHAIRLGMELQLI 236 >UniRef50_B3PCB5 Putative two-component transcriptional regulator, LuxR family n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PCB5_CELJU Length = 238 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 58/238 (24%), Positives = 100/238 (42%), Gaps = 11/238 (4%) Query: 10 RRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCV--RHPVPFTRPKVAFYTNYPEAW 67 + + + +++ E + +D L + HP + F NYP W Sbjct: 3 MEDYICETNNSKNIQSLFNLFEKYMSDIGFDRVILGLMTDHPRLKKEAEHGFLKNYPADW 62 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQY 122 V Y + ++ IDPV + + G W++ L ++ ++ A L GV Sbjct: 63 VERYFDQKYVHIDPVRHKAYDAIGAYTWDELKASMQLSNKQIQMFNEAEDARLFNGVGVS 122 Query: 123 LMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSK 182 + P A+ + CS + + D L L+ + RL ++ V ++ + Sbjct: 123 MRGPGGAI-AAVGAACSVKNGNLNKDILD-AANLMSVQFYTCYWRLMEKKVTL--VHLTA 178 Query: 183 REKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +E+EIL W+A G T ++IA L IS +TV+FH +N K+ A N T A LI Sbjct: 179 KEQEILTWSAAGYTKSQIAHKLCISVHTVDFHVRNCLAKLEAQNITHAVSRALNLSLI 236 >UniRef50_Q7NQP7 Transcriptional activator, LuxR/UhpA family of regulators n=2 Tax=Chromobacterium violaceum RepID=Q7NQP7_CHRVO Length = 265 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 9/191 (4%) Query: 52 FTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLF----SEAQPLW 107 R + +YP W++ Y +NF DP++ + QG ++W + SE + Sbjct: 69 IQRMEKVLNVSYPSDWLNQYSQENFAQHDPIMR-IHLGQGPVIWEERFSRAKGSEEKRFI 127 Query: 108 EAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR 167 A ++G+ G+T +G + + P + L + L A +R Sbjct: 128 AEASSNGMGSGITFSAASDRNNVGSI---LSIGGKEPGRNAALVAMLNCLTPHLHQAAVR 184 Query: 168 LNDEIVMTPE-MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPN 226 + + +P M S+RE +I W + GKT+ EIA IL+ISE TV FH N+ +K+NA N Sbjct: 185 IANLPPASPSNMPLSQREYDIFHWMSRGKTNWEIATILNISERTVKFHVANVIRKLNANN 244 Query: 227 KTQVACYAAAT 237 +T Sbjct: 245 RTHAIVLGMHL 255 >UniRef50_P54293 Transcriptional activator protein esaR n=7 Tax=Enterobacteriaceae RepID=ESAR_ERWST Length = 249 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 59/232 (25%), Positives = 93/232 (40%), Gaps = 16/232 (6%) Query: 23 AEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPV 82 + + I+ + L Y+ V V ++YP+ W+ Y+A NF DPV Sbjct: 12 TDTLQTYIQRKLSPLGSPDYAYTVVSK--KNPSNVLIISSYPDEWIRLYRANNFQLTDPV 69 Query: 83 LNPENFSQGHLMWNDDLFSEAQ----PLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRC 138 + W++++ + ++ ++ + + G T L L LS Sbjct: 70 ILTAFKRTSPFAWDENITLMSDLRFTKIFSLSKQYNIVNGFTYVLHDHMNNLALLSVIIK 129 Query: 139 SAREIPILS--DELQLKMQLLVRESLMALMRLND-EIVMTPEMN-------FSKREKEIL 188 + + Q MQ+L+ + + RL E P +N FS RE E+L Sbjct: 130 GNDQTALEQRLAAEQGTMQMLLIDFNEQMYRLAGTEGERAPALNQSADKTIFSSRENEVL 189 Query: 189 RWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 W + GKT AEIA I IS +TV FH KN+ K+ N Q LI Sbjct: 190 YWASMGKTYAEIAAITGISVSTVKFHIKNVVVKLGVSNARQAIRLGVELDLI 241 >UniRef50_B2IKZ9 Transcriptional regulator, LuxR family n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IKZ9_BEII9 Length = 257 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 97/245 (39%), Gaps = 12/245 (4%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 + D +F +T + QR + E++ + L + Q+ + Y+++ RP Sbjct: 3 INDSEF----QTYVKNLQRAKNFSEIHDCVLLVSCQMGFSYFAITEHFNTQPKRPVPMSI 58 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGL 115 +YP+ W S ++ K +DPV N W++ + + + E AR +GL Sbjct: 59 VHYPKDWESLFRRKRLFGVDPVQRASNNRLRGFFWSEVPRMIPMSRQDHMILELARKNGL 118 Query: 116 RRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT 175 G T +P R G SF + E+ + L L + + + L+ Sbjct: 119 GDGYTVPANIPGRYNGSCSFGMKVSEEVRLEFKHLPL-LDYIGTAAFEIAQSLHHGSAPG 177 Query: 176 --PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 + R+ + + A+G ++ EI L+I T H K+ ++ +T +A Sbjct: 178 ELDRPRLTDRQLDCVALLAQGLSTVEIGHALNIRYETAVQHIKDASQRYGVNRRTPLAVR 237 Query: 234 AAATG 238 A G Sbjct: 238 ALLDG 242 >UniRef50_D2M390 Transcriptional regulator, LuxR family n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2M390_RHOPA Length = 218 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 77/210 (36%), Gaps = 8/210 (3%) Query: 30 IELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFS 89 + + A L+ ++ P+ + YP+ W S+Y ++ IDPV+ Sbjct: 1 MAVTAAALDLSCFAYLALPQKLDGTPR--LMSTYPKEWTSHYLRSHYERIDPVIMQALRD 58 Query: 90 QGHLMWN-----DDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAR-EI 143 W L + L + A +G+R G T + + + ++F+ + Sbjct: 59 TEPFRWGIGSTERYLSPAQKRLLDEASQYGIRLGFTVPIHDGHGPVAAVTFAGNQREAQF 118 Query: 144 PILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMI 203 +QL+ + R + S RE E L W A GK++ +I I Sbjct: 119 ERFVTSNPRMLQLMAMFFHSHVRRKLASDLRVDGAALSAREFECLEWAARGKSAWDIGRI 178 Query: 204 LSISENTVNFHQKNMQKKINAPNKTQVACY 233 L IS +T + N + K+ Q A Sbjct: 179 LGISHHTAISYLNNAKAKLGVRTVVQAALR 208 >UniRef50_C5B5L7 Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B5L7_METEA Length = 296 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 63/256 (24%), Positives = 97/256 (37%), Gaps = 29/256 (11%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 + +++ + L A + ++ +S V T + + W Sbjct: 42 DDAMTAVDGARCVQDLGEILHLTATKAGFESFSFLNGATVASTSESIIM--TVSKDWQDT 99 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWNDDLFSE--------AQPLWEAARAHGLRRGVTQY 122 Y ++ FL +DP L S MW+D A+ EAAR HG G+ Sbjct: 100 YFSEGFLDVDPCLMRALTSNSSFMWSDIELPPVVNGKVPGARRTMEAARDHGYVDGLVLP 159 Query: 123 LML------PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIV--- 173 L L P + L F + R +P +S + +L L L+ ++ Sbjct: 160 LHLVDTKGSPYNSFCSL-FWKEDERLLPEVSRRYGHYLHMLAMLWEQKLQDLSPQLSTGM 218 Query: 174 ---------MTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINA 224 S RE+++L W A GKT+ E A+IL +S TVN H QKK+ A Sbjct: 219 LGSISVLGNARSTKALSGRERDVLAWAAHGKTAGETALILGLSMETVNHHLGKAQKKLMA 278 Query: 225 PNKTQVACYAAATGLI 240 NKT A G+I Sbjct: 279 ANKTHAVAIAINRGVI 294 >UniRef50_A0KQW9 Transcriptional activator protein AhyR/asaR n=2 Tax=Aeromonas RepID=A0KQW9_AERHH Length = 203 Score = 166 bits (422), Expect = 4e-40, Method: Composition-based stats. Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 48/227 (21%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQA 73 + RF + + ++ ++E + Q+ +DY+ L + P+ + VA + N P +W Y Sbjct: 10 IDRFTKAKKTSDIQQQLERFSHQMGFDYFRLLIIFPISMQKSHVALFNNCPTSWFDAYSE 69 Query: 74 KNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFL 133 +++L DPV+ + WN Sbjct: 70 RHYLTQDPVVFLGLKQTQPIFWNKLD---------------------------------- 95 Query: 134 SFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAE 193 C + +P S +QL+ +S LM+ E S REKE L W +E Sbjct: 96 ----CDSPWLPSASYIFNSALQLI--KSRPDLMKYLTE--------LSDREKECLFWASE 141 Query: 194 GKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 GKTS EIA IL ISE TVNFH + K ++ N+ Q + ++G+I Sbjct: 142 GKTSWEIATILGISERTVNFHLNQVTNKTDSKNRNQAIAKSISSGII 188 >UniRef50_Q1NCQ8 Putative uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NCQ8_9SPHN Length = 256 Score = 166 bits (422), Expect = 4e-40, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 97/237 (40%), Gaps = 9/237 (3%) Query: 10 RRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVS 69 +L +++ + EE+ + A ++ + +++L P+ RP +YP A V Sbjct: 12 ADDLLRALRKVASREELAALMTCLASEIGFRHFALIHHDPLAGERPDRVDIRDYPAAIVD 71 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYLM 124 + L DPV+ FS G +W+D + + E HGL G+T + Sbjct: 72 RLFDQGQLRRDPVIRGCLFSDGAFLWSDLDKIITFTRQDRHSLEFGAGHGLNEGITVPHV 131 Query: 125 LPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR-LNDEIVMTPEMNFSKR 183 L +G +F+ + P L+ Q+ + A R L ++ P R Sbjct: 132 LLGECIGSCTFAGATD---PQLASRYLGFAQITGIFAFQAARRMLLASPLIGPAPRLHPR 188 Query: 184 EKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 ++ + G ++ EIA L ++ TV+ + ++ +A ++ ++ A G I Sbjct: 189 PRDCVVLAGRGFSNKEIARELGLTPRTVDGYLTEARRLFDAHDRAELVVSAVLAGEI 245 >UniRef50_B2SK12 Transcriptional regulator AhyR/AsaR family n=15 Tax=Xanthomonas RepID=B2SK12_XANOP Length = 254 Score = 166 bits (422), Expect = 4e-40, Method: Composition-based stats. Identities = 49/241 (20%), Positives = 87/241 (36%), Gaps = 17/241 (7%) Query: 17 FQRMETAEEVYHEIELQAQQLEY-----DYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 Q +T + L + DY + + P V N P + Sbjct: 12 LQASQTVNSCLDRVFRDVCALGFQSLVYDYAPVPLSMEGALITPTVFMQRNAPGDMQHVW 71 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWN----------DDLFSEAQPLWEAARAHGLRRGVTQ 121 + DPV +W+ + + + + + G+ GVT Sbjct: 72 CEHGYYQHDPVQQRATRRNTPFVWSYRTDGDCAGVEYVGGQHRQVTRYLCDSGMGTGVTV 131 Query: 122 YLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR--LNDEIVMTPEMN 179 L LP A S + + + E QL LL+ + A + L+ + + Sbjct: 132 PLHLPGGAFATFSAAIDAVAAEALRLAESQLLPFLLLAHAFQARAQELLDPQERRCHHIP 191 Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 ++RE+E L+++A+G TS IA L+ S TVN H + +K+ A N+ + L Sbjct: 192 LTRRERECLQYSAKGLTSKRIAAALNRSTATVNLHLNSAARKLGARNRVEAVVRGMHYRL 251 Query: 240 I 240 + Sbjct: 252 L 252 >UniRef50_B2IHP8 Transcriptional regulator, LuxR family n=2 Tax=Beijerinckiaceae RepID=B2IHP8_BEII9 Length = 268 Score = 166 bits (421), Expect = 5e-40, Method: Composition-based stats. Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 5/190 (2%) Query: 56 KVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND--DLFSEAQPLWEAARAH 113 Y + W+ +Y+ +N++ +DPV+N S + W + Q + A Sbjct: 78 DPYILGTYSQEWIEHYRERNYVNLDPVINVGARSLLPIDWAKLPRSSPKIQKFFGEATDF 137 Query: 114 GL-RRGVTQYLMLP-NRALGFLSFSRC-SAREIPILSDELQLKMQLLVRESLMALMRLND 170 G+ R+G+T + P N + + E EL M + ++ Sbjct: 138 GVGRQGLTIPVRGPTNGLWALFCMTTDDTQAEWQARHYELIRDMVHVAHFIQQRAFEMHH 197 Query: 171 EIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQV 230 + +KRE E L W+AEGKT +I++++ IS+ TV H + + K+ A N+ Sbjct: 198 QDEGIDINTITKREIEALSWSAEGKTLEDISVLMRISQETVKAHLDSARYKLGALNRIHA 257 Query: 231 ACYAAATGLI 240 A GLI Sbjct: 258 VAKAIRAGLI 267 >UniRef50_A5ELZ2 Transcriptional regulator, LuxR family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5ELZ2_BRASB Length = 242 Score = 166 bits (421), Expect = 5e-40, Method: Composition-based stats. Identities = 51/235 (21%), Positives = 89/235 (37%), Gaps = 5/235 (2%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 + R R + E+ + + + E + RH P Y WV Sbjct: 6 ESACERIVRTTSLSELSNVLSETRHEYELAHLVYNARHLPRTEEPNPLLLLTYDAEWVQR 65 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEA--QPLWEAARAHGL-RRGVTQYLMLPN 127 Y+ +++ IDPV+ S L W++ EA + + AR+ G+ R G+T + P+ Sbjct: 66 YKTQDYFQIDPVIKHGLASLLPLDWSNLESGEADVRAFFREARSFGVGRNGMTIPIRGPH 125 Query: 128 RALGFLSF-SRCSAREIPILSDELQLKMQLLVRESLMALMRLND-EIVMTPEMNFSKREK 185 S S SA + + ++ +RL+ + S+RE+ Sbjct: 126 GERALFSLTSNLSAGQWQTTRLAMMRDFMIIAYFFHDQAVRLSGMRDLPGMGRPLSRRER 185 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E L+ A G +IA L +S V + + + K+ TQ A + LI Sbjct: 186 ETLQLAARGFAPKQIAADLRVSTTAVRLYLQTARTKLECTTLTQGIAKAISLDLI 240 >UniRef50_Q216V3 Transcriptional regulator, LuxR family n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q216V3_RHOPB Length = 242 Score = 165 bits (419), Expect = 8e-40, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 91/243 (37%), Gaps = 7/243 (2%) Query: 2 QDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYT 61 W L + + TA++++H + + + + + Sbjct: 1 MTSGAILW---CLEKIRVAATADDLHHVLRHICEAYQLAHAVFHATDTPAVRAERPLLIL 57 Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGL-RRG 118 YP WV Y +++ IDPV+ L W+ D + + + A G+ R G Sbjct: 58 TYPAEWVENYTRRDYFKIDPVVAIGRVGFLSLDWSTIDQKTASSAKFFREADEFGVGRHG 117 Query: 119 VTQYLMLPNRALGFLSF-SRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPE 177 +T + P+ + S +A + D + Q++ M Sbjct: 118 LTTTVRGPSGERSLFTVTSNANAAQWTRQRDACIHEFQIIANHFHQRAMISTGLRGGDGP 177 Query: 178 MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAAT 237 + SKREK+ + A+G +IA +L +SE+ + + + ++K+ A +Q A + Sbjct: 178 LPLSKREKQCIELLAKGFLPKQIAALLDLSESAIRLYLCSARRKLQASTTSQAIAIALSL 237 Query: 238 GLI 240 LI Sbjct: 238 ELI 240 >UniRef50_C8SNG6 Transcriptional regulator, LuxR family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SNG6_9RHIZ Length = 240 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 97/245 (39%), Gaps = 12/245 (4%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 M D D F + R + + ++ L + L +++ L + Sbjct: 1 MIDSDVF----EFVERCRAHTAPGPLLDDVLLTVRNLGFEHLILSGVPLGGQKLAPMVEL 56 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGL 115 +PE W Y A+D V + +W D ++ + A G+ Sbjct: 57 NGWPEGWFKRYVEAEHAAVDGVCIYSAKTLKPFLWADVPAKWSDTKGSRRVAGEATEFGI 116 Query: 116 RRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT 175 G ++ + LSF+ S+ ++ LS ++++ + + MA+ L+ + Sbjct: 117 SSGFAVPMLSVHHWQSVLSFA--SSAKVCALSPREEVQLVTMAVYAGMAIQALSHGDEVE 174 Query: 176 PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 E ++REKE+L W A GKTS+E + IL ++E TV +H ++ TQ A Sbjct: 175 -EGLLTEREKEVLLWAAAGKTSSETSQILGLAERTVKWHATRAREAFGVATTTQAIVEAV 233 Query: 236 ATGLI 240 +I Sbjct: 234 RRRMI 238 >UniRef50_Q1NBZ0 Transcriptional regulator, LuxR family protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NBZ0_9SPHN Length = 248 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 48/227 (21%), Positives = 90/227 (39%), Gaps = 10/227 (4%) Query: 20 METAEEVYHEIELQAQQLEYDYYSLCVRHPV-PFTRPKVAFYTNYPEAWVSYYQAKNFLA 78 ++ A + + + + + +Y+L + P R +YP+ WV +QA+ A Sbjct: 18 IKDATALSDLMAEITKAMGFRHYALVHHVDLKPAVRS--VHIVDYPQDWVERFQARRLYA 75 Query: 79 IDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFL 133 DP+ + + W+ L + + + A GL G T +P G Sbjct: 76 SDPIHRASHRTNVGFAWSAVQSIISLTAADRSILAEAYEAGLGDGFTVPAHIPGELNGSC 135 Query: 134 SFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAE 193 SF+ + + + E+ + R++ P + ++R+ E + A Sbjct: 136 SFAMAAGEMLDHRQLPFVQLVGSFAFEAARKISRIHAPQSECP--SLTERQAECVALVAR 193 Query: 194 GKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 GKT EI+ IL I + TV H K+ + + +T +A A G I Sbjct: 194 GKTDWEISQILGIGQETVIQHVKDARDRYGVTKRTLLAIRALFEGQI 240 >UniRef50_Q9F5D3 Riorf119 protein n=2 Tax=Agrobacterium rhizogenes RepID=Q9F5D3_AGRRH Length = 224 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 45/230 (19%), Positives = 90/230 (39%), Gaps = 15/230 (6%) Query: 18 QRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFL 77 + + ++ A ++ ++ + ++ + +YPE W Y ++ Sbjct: 3 EAAHDERMIKSALKSFANSHGFERFAYLQTEAL-----EIRTFNSYPEEWQDIYLGSHYS 57 Query: 78 AIDPVLNPENFSQGHLMWNDDLFS-----EAQPLWEAARAHGLRRGVTQYLMLPNRALGF 132 IDPV+ W D + E + + A HG+R G+T + + Sbjct: 58 RIDPVITEAKRRMETFSWTADDWPARGSSELRRFRDQAIEHGIRSGLTIPVEGSFGSTMM 117 Query: 133 LSFSRCS--AREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRW 190 L+F+ A +L + + L + L + ++ P+ S RE L W Sbjct: 118 LTFASSEKKAENGKVLDGQKATRAVLAIHYRLKI---IAATTIVAPKRLLSPREAMCLMW 174 Query: 191 TAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 A+GK++ E AM+ I+ TV + ++K++A + A GL+ Sbjct: 175 AAKGKSAPETAMLTGINARTVQHYLDKAREKLDAATVPHLVAIAKDHGLV 224 >UniRef50_A6ULF7 Response regulator receiver protein n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6ULF7_SINMW Length = 243 Score = 165 bits (417), Expect = 1e-39, Method: Composition-based stats. Identities = 52/231 (22%), Positives = 90/231 (38%), Gaps = 4/231 (1%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQA 73 L Q + ++ + + + ++ V + T YPE W Y Sbjct: 11 LRTLQAAKHRADLQSALGELCEHYGVSHMTILVVCSGGRSGSYPYCCTTYPERWTEKYVG 70 Query: 74 KNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGLR-RGVTQYLMLPNRAL 130 K F IDPV++ + + W+ D +A L++ AR + + G+T + P Sbjct: 71 KCFFEIDPVIDVIRWGFLPVDWSSLDRRSEQAHRLFKEARLYDIGPHGLTIPIRGPKGER 130 Query: 131 GFLSF-SRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILR 189 LS S R L ++Q+L ++ + N S+RE + + Sbjct: 131 CLLSVTSNLPGRHWSRLRASSIHELQILSHYLHETVLSASGLRGTDRYRNLSRRESQCFQ 190 Query: 190 WTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 A G+ S +IA L ISEN V + ++ + K+ A Q A+ LI Sbjct: 191 LLATGRISKQIAADLGISENAVKLYLRSARMKLGAATSHQAVARASFLELI 241 >UniRef50_P55407 Probable transcriptional activator protein traR n=9 Tax=Rhizobiaceae RepID=TRAR_RHISN Length = 236 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 99/237 (41%), Gaps = 15/237 (6%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 R+++ + + + + A YD ++ + +V + +YP W S Sbjct: 8 RSLIDMLEAAQDGHMIKIALRSFAHSCGYDRFAYLQKDGT-----QVRTFHSYPGPWESI 62 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEA-----QPLWEAARAHGLRRGVTQYLML 125 Y ++ IDPVL + W D + + + A +HG+R GVT + Sbjct: 63 YLGSDYFNIDPVLAEAKRRRDVFFWTADAWPARGSSPLRRFRDEAISHGIRCGVTIPVEG 122 Query: 126 PNRALGFLSFSRCSAREI--PILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKR 183 + L+F+ + +L + +++ ++V L + + V+ P+ S R Sbjct: 123 SYGSAMMLTFASPERKVDISGVLDPKKAVQLLMMVHYQLKI---IAAKTVLNPKQMLSPR 179 Query: 184 EKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E L W ++GKT++ A + I+ TV + + K++A + Q+ A GL+ Sbjct: 180 EMLCLVWASKGKTASVTANLTGINARTVQHYLDKARAKLDAESVPQLVAIAKDRGLV 236 >UniRef50_Q2T4M4 Autoinducer-binding transcriptional regulator, LuxR family, putative n=3 Tax=Burkholderia thailandensis RepID=Q2T4M4_BURTA Length = 238 Score = 163 bits (414), Expect = 3e-39, Method: Composition-based stats. Identities = 65/242 (26%), Positives = 106/242 (43%), Gaps = 21/242 (8%) Query: 10 RRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVS 69 R + R + +A + + + + +L + + + + P+P TR + ++NYP A Sbjct: 5 REQFVRRMRASRSAGDAFDVVLQRGTELGFQFCAYRLTAPIPITRRRTFVWSNYPNA--- 61 Query: 70 YYQAKNFLAIDPVLNPENFSQGH----------LMWNDDLFSEAQPLWEAARAHGLRRGV 119 A PVL+ + +G S A LW G+R G Sbjct: 62 -------CAASPVLDADRSGRGADTDAQACGVTADATQVFESMADGLWAETSDQGVRYGW 114 Query: 120 TQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRL-NDEIVMTPEM 178 + A+G L F+R + + D+++ +M L + + L DE + Sbjct: 115 ALSVRDRWGAVGTLKFARGTREIVQEELDDIEPEMIWLAHLAHDTIGSLMRDETIPGEIA 174 Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 S E++IL WTAEGKT +EI+ IL +S +NFH +N+ K+ A NKT A A G Sbjct: 175 RVSLVERQILLWTAEGKTVSEISSILQMSVRNINFHIQNVVGKLGATNKTHAAVKATLVG 234 Query: 239 LI 240 LI Sbjct: 235 LI 236 >UniRef50_Q161C2 Transcription regulator, LuxR family, putative n=2 Tax=Roseobacter RepID=Q161C2_ROSDO Length = 248 Score = 163 bits (414), Expect = 4e-39, Method: Composition-based stats. Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 8/197 (4%) Query: 49 PVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDD-----LFSEA 103 +P ++P YPE WV Y +DP+ + W++ L E Sbjct: 47 QLPGSKPLGIVSDGYPEGWVCEYLQSELFRVDPIPQLASILSRPFRWSEAPKLMRLSPEG 106 Query: 104 QPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLM 163 + + GL GV + PN ++ ++ P L+ + ++Q + + + Sbjct: 107 ERYMQTLAQSGLGDGVAMQVYGPNMRNAYVGLGF--GKQDPDLTADEIFELQCAAQIAHI 164 Query: 164 ALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKIN 223 L E + S RE EIL+W A GK+++ IA IL IS +TV+ + + +K++ Sbjct: 165 RYCELT-EFRQRVAESLSPREVEILQWIARGKSNSVIAEILGISRHTVDTITRRIFEKLD 223 Query: 224 APNKTQVACYAAATGLI 240 ++T A +GL+ Sbjct: 224 VNDRTTAAIRGLGSGLV 240 >UniRef50_Q11FX6 Transcriptional regulator, LuxR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11FX6_MESSB Length = 265 Score = 163 bits (413), Expect = 4e-39, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 93/236 (39%), Gaps = 12/236 (5%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPK---VAFYTNYPEAWVS 69 + T EEV H + + Q+ + P +R + +PE W Sbjct: 33 FTEAMRGCRTTEEVNHSLMIFLQRYGVTSLIAGMIPPSNSSRREQLSYVLLDGWPEEWKR 92 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYLM 124 Y + +L DP ++ H W++ + + + AR LR GVT Sbjct: 93 RYFSLGYLHRDPAIHLVRRGCPHFHWSEIREHCSVCPIGRRIMNEAREFQLRAGVTFSFP 152 Query: 125 LPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKRE 184 +F A E L++ +Q + L + L +V ++ S+R+ Sbjct: 153 TLESK----TFGFLVAAEELDLAETDLFTLQFVAAFGLGCALTLAGGVVGRSNVHLSRRQ 208 Query: 185 KEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +E++ W +EG T+ EIA L++S +T + H + ++ ++ N A GLI Sbjct: 209 REVVAWASEGLTADEIAERLNVSVHTADMHLRAVRTRLGVANTVHAVAEALRLGLI 264 >UniRef50_Q169S8 Transcriptional activator protein RaiR, putative n=14 Tax=Rhodobacterales RepID=Q169S8_ROSDO Length = 239 Score = 163 bits (413), Expect = 4e-39, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 89/234 (38%), Gaps = 8/234 (3%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 +L ++ +T E + I ++ + + Y Y W + Sbjct: 8 EEVLAALEQADTLEGINEAIFTLRGHFGVEHMVYH----WVDSAGEQYGYGTYSLEWAAR 63 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGLRR-GVTQYLMLPN 127 YQ +N++ +DPV+ + W D A+ L A +GL G + + PN Sbjct: 64 YQEQNYIRVDPVVIGCYQRFHPVDWKRLDWSSKAARALRAEAATYGLGNQGYSIPIRGPN 123 Query: 128 RALGFLSF-SRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKE 186 + + C E ++E + ++ L+ + S RE + Sbjct: 124 GQFALFTVNTSCDDEEWAKFTEENRRELILIAHYFNQKALEFEPNKTPEQSQALSPREID 183 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + A G A++A LSISE+T+ + ++ + K+ A N T A + GLI Sbjct: 184 AMTLLAIGYNRAQVAETLSISEHTLRVYIESARFKLGAANTTHAVARALSRGLI 237 >UniRef50_C5SPH1 Transcriptional regulator, LuxR family n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SPH1_9CAUL Length = 254 Score = 163 bits (413), Expect = 5e-39, Method: Composition-based stats. Identities = 50/239 (20%), Positives = 87/239 (36%), Gaps = 12/239 (5%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYD--YYSLCVRHPVPFTRPKVAFYTNYPEAWV 68 + R+ + E ++ L +D +S+ + + + YP W Sbjct: 17 EQFIDDTSRVRSVERLFVVFIEAMAHLGFDRVNFSVMRDMDLDASAQGFGLISTYPTVWQ 76 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYL 123 YY IDPV+ S W D +L + A A GL G+ Sbjct: 77 DYYAHNGLARIDPVVKWAVGSVRPFRWADIEHEAELTRRQRQFLREAEAGGLYNGIGVPF 136 Query: 124 MLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRL-NDEIVMTPEM-NFS 181 P G ++ + + P+ E + RL + ++P + + Sbjct: 137 PGPKTLRGGIALATSVRKARPM---ENLDVLAAYCHHFYAVYKRLVPPGLRLSPAAASLT 193 Query: 182 KREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + E+E+L A G ++ IA LSI +V+FH +N+ +K N+T A G I Sbjct: 194 RTEQEVLFRLAHGLSNEIIADRLSIKAGSVDFHVQNIFRKFGVNNRTAAAMKGLMGGYI 252 >UniRef50_C6B8S2 Transcriptional regulator, LuxR family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6B8S2_RHILS Length = 236 Score = 163 bits (413), Expect = 5e-39, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 87/233 (37%), Gaps = 11/233 (4%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQ 72 ++ + + A+ ++ ++ H K + Y + W S Y Sbjct: 10 LIDATVAAANEHSLKTALSDVARAHGFERFAYLNLH-----TAKSFAVSTYQKEWQSLYF 64 Query: 73 AKNFLAIDPVLNPENFSQGHLMWNDDLFSEA-----QPLWEAARAHGLRRGVTQYLMLPN 127 +++++AIDPV+ + W+ D + ++ A G+R G++ + Sbjct: 65 SRSYMAIDPVVTAAKRLRRAFRWSADFERRRADDGIKEFYDTAAEFGIRSGLSIPIWTGF 124 Query: 128 RALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEI 187 L+ + E D+L + A ++ P+ FS RE Sbjct: 125 GQFAILTLASARHLETS-GPDDLDTVGAAGAAALIHARLQGTTTPTQRPDFIFSDREALC 183 Query: 188 LRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 LRW AEG IA + ++ +TV + ++ K+ + Q A+ GLI Sbjct: 184 LRWAAEGLPMHSIADVTGLTYHTVRWDLDRVKAKLGVYTQKQAVAVASRFGLI 236 >UniRef50_B5J2H2 Autoinducer binding domain protein n=6 Tax=Rhodobacterales RepID=B5J2H2_9RHOB Length = 256 Score = 163 bits (412), Expect = 6e-39, Method: Composition-based stats. Identities = 44/234 (18%), Positives = 85/234 (36%), Gaps = 8/234 (3%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 R +L+ + + I + + YP +WV + Sbjct: 6 RHLLVTLDQATELSALQDTIVRLRDHYGVAHMVYH----WVSADGEQYGCGTYPLSWVQH 61 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGLRR-GVTQYLMLPN 127 Y K++L IDPV+ + W D A A G+ G + + P+ Sbjct: 62 YVQKDYLRIDPVIIGCFKQFHPVDWKALDWSSKAAVAFRAEAMQAGVGNQGYSIPIRGPS 121 Query: 128 RALGFLSFSR-CSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKE 186 S S + ++ + + L + + + + P S RE + Sbjct: 122 GQFALFSLSNNTDDTDWAAFTESNRRDLILCAHSFNQKALEVETKRMPDPVKPLSGREID 181 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +L + A G + +++A L+ISE+T+ + ++ + K+ A N A + GLI Sbjct: 182 VLTYLAMGYSRSQVAQTLTISEHTLRAYVESARFKLGASNTMHAVARAVSEGLI 235 >UniRef50_A5P6H4 Transcriptional regulator, LuxR family protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P6H4_9SPHN Length = 217 Score = 162 bits (411), Expect = 7e-39, Method: Composition-based stats. Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 12/221 (5%) Query: 26 VYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYT--NYPEAWVSYYQAKNFLAIDPVL 83 ++ + + ++ ++ V T P +P+AW Y++ IDP Sbjct: 1 MFEILRRYFAEFGFEAFAYMV---PSKTEPGRIEMDAFGFPDAWAETYRSAEMDTIDPFP 57 Query: 84 NPENFSQGHLMWND----DLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCS 139 S L + E + E AR HG+ G+ + LG F+ Sbjct: 58 RYVARSGRPLRLTEISAQAQSKEQKAFLEQAREHGITDGLIIPTFGIRQNLGV--FAIGQ 115 Query: 140 AREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAE 199 +++ +L +Q + + + + L N S RE EIL W A GKT++E Sbjct: 116 VKDLKVLERASVFALQAVAQAAHTQMEMLASRADGL-RTNLSNRETEILHWIALGKTNSE 174 Query: 200 IAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 IA IL I TV + K + K++ +++ A A G+I Sbjct: 175 IATILGIGGPTVATYIKRVFDKLDVKDRSSAAVKAIRWGII 215 >UniRef50_C5ADX8 Acylhomoserine lactone dependent transcriptional activator n=1 Tax=Burkholderia glumae BGR1 RepID=C5ADX8_BURGB Length = 241 Score = 162 bits (411), Expect = 8e-39, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 8/187 (4%) Query: 59 FYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLF----SEAQPLWEAARAHG 114 F ++YP Y+ + +DPV+ S W + + R G Sbjct: 51 FLSSYPIRLQQEYRRRALHRVDPVVLHAIQSVAPFSWAEAFRQQRVPDPSEFDALRREFG 110 Query: 115 LRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVM 174 L G + P + +G LSF R P E++ + ++ R+N + Sbjct: 111 LHDGYVFTVHDPYQYVGMLSFFNRGGR--PEFRAEIERVKGAMQLALVLFHSRINAKPPD 168 Query: 175 TPE--MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVAC 232 + + + RE+ +L+W A GK+ +EIA I I E TV +H N+ +K++ Q Sbjct: 169 SRHRVESLTLRERTVLKWAAMGKSYSEIADICGIRERTVKYHMANVVQKLDVSTAKQAVI 228 Query: 233 YAAATGL 239 A+ GL Sbjct: 229 VASRLGL 235 >UniRef50_Q28T92 Transcriptional regulator, LuxR family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28T92_JANSC Length = 243 Score = 162 bits (411), Expect = 9e-39, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 95/233 (40%), Gaps = 11/233 (4%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQ 72 ++ + + + ++ + S +PE W+ Y Sbjct: 7 IMEQIRTAPSRRALWQIMLDFMHDEGVVMGSYHFVD--ADAASVRVAADGFPEEWICEYL 64 Query: 73 AKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYLMLPN 127 + IDP+ W++ ++ + RA GL G+ Y+ P Sbjct: 65 NRKLALIDPIPALAARMSRPFYWHEIQDLIPPSAQTDAYLDRLRASGLGDGLAFYVFGPG 124 Query: 128 RALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEI 187 ++ R + L E ++Q + + + + L+D+ E S REK++ Sbjct: 125 LRNAYVGLGF--GRPVVDLPPEQIFRLQCVAQAGHLRVCELSDQ--APKEAALSPREKQV 180 Query: 188 LRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L W A+GK+++ IA IL++S +TV+ H +++ +K++ ++T A +G++ Sbjct: 181 LDWIAKGKSNSVIAEILAMSPHTVDAHVRSIYRKLDVTDRTSAALRGVGSGVL 233 >UniRef50_B9K3B4 Two-component transcriptional regulator LuxR family n=1 Tax=Agrobacterium vitis S4 RepID=B9K3B4_AGRVS Length = 240 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 80/234 (34%), Gaps = 9/234 (3%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 + R ++ + ++ + + + Y V +P W + Sbjct: 8 EFMERCDNQKSVDNLFSDFGTVIAKRGFHSYIYTGLPAVGDDVKHYVVKNAWPPGWTEQF 67 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWNDDL-----FSEAQPLWEAARAHGLRRGVTQYLMLP 126 + N+ A DPV W + + + + A + L G+ + P Sbjct: 68 EGLNYFADDPVSRWSLSQSKPFTWKTAREETKATARTKEIQQEADRYRLCDGIVFPMFDP 127 Query: 127 NRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKE 186 N +S + L+ E + LL M L + + REKE Sbjct: 128 NSWQSVISLATDDKGG---LAKENIGDLYLLSSYCAMTANNLLRRAEQA-DHRLTDREKE 183 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 IL+W + GKT EI IL ++E +V ++ + N+ Q A GLI Sbjct: 184 ILQWVSRGKTDWEIGTILRMTEGSVTQRLARIRDTLGVKNRPQTVSQAIRLGLI 237 >UniRef50_A9D281 Probable transcriptional regulator protein, LuxR family n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D281_9RHIZ Length = 237 Score = 161 bits (409), Expect = 1e-38, Method: Composition-based stats. Identities = 54/237 (22%), Positives = 95/237 (40%), Gaps = 12/237 (5%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTR-PKVAFYTNYPEAWVS 69 + R + T E+ ++ + ++ ++S+ R K +N P ++ Sbjct: 5 EDLFQRLKTATTEHELAVSLQALTSEFDFRFFSIFDIPATFSDRLSKHIRLSNLPSEYIE 64 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMW------NDDLFSEAQPLWEAARAHGLRRGVTQYL 123 Y + N L+ V S + + E Q + H + GV + Sbjct: 65 EYDSLNLLSNSSVFAMLRQSTAPMTRFLDLAVKERPTEEQQVMRAVFEKHNMTMGVYFPV 124 Query: 124 MLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKR 183 N ++F P LS + L V + A ++ ++ T + R Sbjct: 125 HGSNGRRAAMAFY----GTRPALSFAETGVLGLCVLHAFDAYSKMTNKT-GTKANGITTR 179 Query: 184 EKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E E+L W A GKTS EIA ILS+S++TVN + + +K++ N+TQ+ A LI Sbjct: 180 ELEVLHWAANGKTSTEIAAILSLSDHTVNTYMNSAMRKLDCVNRTQLVAKALRLHLI 236 >UniRef50_Q1GMP0 Transcriptional regulator, LuxR family n=2 Tax=Ruegeria RepID=Q1GMP0_SILST Length = 239 Score = 161 bits (409), Expect = 1e-38, Method: Composition-based stats. Identities = 53/232 (22%), Positives = 87/232 (37%), Gaps = 8/232 (3%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQ 72 +L + EE+ + ++ D+ S V+ + P AW Y Sbjct: 10 ILELIESSANLEEIGEVLAQFRNLVDLDHVSYRWVDRSG----SVSGCSTLPTAWQDRYS 65 Query: 73 AKNFLAIDPVLNPENFSQGHLMWNDDLFSE--AQPLWEAARAHGLRR-GVTQYLMLPNRA 129 A ++ IDPV+ + + W D +S A + + A G+ G + + P Sbjct: 66 AMSYHRIDPVVIGCYTAFHPVDWRDLDWSARLASAYRKDSIAFGVGNQGYSVPVRGPAGQ 125 Query: 130 LGFLSFS-RCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEIL 188 LS + C + + + LL + TPE S RE E L Sbjct: 126 YAILSITKSCEGEVWDKFTQKHSRDLILLAHYVNRRALEFEVSYYPTPEQPLSMRESEAL 185 Query: 189 RWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 AEG + A A ++ISE+T+ + + + K+ A N T A GLI Sbjct: 186 SLLAEGMSRARAAEAMAISEHTLRVYIEGARSKLQAQNTTHAVARAVTMGLI 237 >UniRef50_B4RHX3 Transcriptional regulator, LuxR family n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RHX3_PHEZH Length = 252 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 55/232 (23%), Positives = 94/232 (40%), Gaps = 13/232 (5%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKV-AFYTNYPEAWVSY 70 + Q++E+ E+ + L D + + V+ P V + AW ++ Sbjct: 14 DTINDAQQVESIPELEAVFAKTLEPLGVDVF-VGVQIADPLRERHVEVTFGRTHAAWQAH 72 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWND------DLFSEAQPLWEAARAHGLRRGVTQYLM 124 Y+A+ A DP++ S L W+D L + + E AR+ GL G+ L Sbjct: 73 YEAQGHAARDPIVREMLRSTEPLFWSDLPARRGALKPDEARVMEEARSFGLNEGLMTPLH 132 Query: 125 LPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRE--SLMALMRLNDEIVMTPEMNFSK 182 G +S + + + + + LL SL +R ++ + S Sbjct: 133 ---HVDGSVSAVLMMGERLASDAPDTRAALHLLSIYYGSLARKLRQRNDGGEPQKAKLSA 189 Query: 183 REKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 R+ E LRW EGK+S I ILS+S TV+ H + +K+ + Q A Sbjct: 190 RQIECLRWAREGKSSYVIGQILSLSARTVDEHLASACRKLGVHTRMQAVAQA 241 >UniRef50_B1KKQ1 Transcriptional regulator, LuxR family n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KKQ1_SHEWM Length = 250 Score = 161 bits (407), Expect = 2e-38, Method: Composition-based stats. Identities = 57/180 (31%), Positives = 81/180 (45%), Gaps = 13/180 (7%) Query: 66 AWVSYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVT 120 W + YQ K F IDPV++ + W L E A+ GL+ G + Sbjct: 79 EWDNIYQKKKFQYIDPVVSCSASFRRSFNWASVPSMITLSEVQFNFLERAQEMGLKEGAS 138 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 + L+ + L+ E ++L+ S A+ RL + P Sbjct: 139 IGSFSTRQIYKELTITSVCG---CSLNPEQLASLELINAVSAQAMKRL-----ILPAEKL 190 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + RE EIL W++EGK+S EI MI SI+E TV FH KN+ KK+N N+ Q A GLI Sbjct: 191 TGRESEILAWSSEGKSSWEIGMICSITERTVKFHLKNIYKKLNVQNRAQAIVCAIRLGLI 250 >UniRef50_C7D7H9 Autoinducer-binding transcriptional regulator LuxR n=4 Tax=Rhodobacteraceae RepID=C7D7H9_9RHOB Length = 258 Score = 160 bits (406), Expect = 3e-38, Method: Composition-based stats. Identities = 47/234 (20%), Positives = 86/234 (36%), Gaps = 8/234 (3%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 T + ++ + + I + D+ + + Y +WV Sbjct: 6 ETFIEELEQATSLNHLQDSISDLRDLYKIDHIVYH----WVSSDGEQYGCGTYDRSWVQR 61 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGLR-RGVTQYLMLPN 127 Y +++L IDPV+ + W D A+ A G+ +G + + PN Sbjct: 62 YVEQDYLRIDPVVVGCFQRFHPVDWKRLDWSSKAARTFQAEAIEAGVGIQGYSIPIRGPN 121 Query: 128 RALGFLSFS-RCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKE 186 S S C ++ + + L+ + V S RE + Sbjct: 122 GQFALFSASHNCDDDWWANWTEANRRDLILIAHTFNQKGLEFEKNRVPEAAKGLSPREVD 181 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + + A G + A++A LSISE+T+ + ++ + K+ A N T A A GLI Sbjct: 182 AMTFLAMGYSRAQVANTLSISEHTLRAYIESARFKLGALNTTHAVARAMAHGLI 235 >UniRef50_Q216C2 Transcriptional regulator, LuxR family n=2 Tax=Rhodopseudomonas palustris RepID=Q216C2_RHOPB Length = 240 Score = 160 bits (406), Expect = 3e-38, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 84/234 (35%), Gaps = 4/234 (1%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 L R + +++ + + + H +P Y +AWV Sbjct: 4 EQALSTIDRANSVDDLARTLVDWRNESGVAHLVYHATHVPGCEQPNPVLLLTYDDAWVKR 63 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGL-RRGVTQYLMLPN 127 Y +++ IDPV+ + + W + +A+ + A ++G+ R G T + P Sbjct: 64 YVEQDYFGIDPVVVAGRDAVLPIDWMSVEHATPQARQFFAEAESYGVGRHGFTLPIRGPA 123 Query: 128 RALGFLSFS-RCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKE 186 + + + LL MRL + S+RE++ Sbjct: 124 AERALFTITTNATDDHWHRWRFSYLKDFHLLAHYLHDRAMRLAGLRLDHAMRPLSRREQQ 183 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L+ G+T +IA L +S + V+ + + ++K+N Q A L+ Sbjct: 184 CLQGLVHGRTPGQIAGDLELSASAVHGYLRTARRKLNCATHEQAIAKAVRLELL 237 >UniRef50_B6R4Z6 Transcriptional regulator, LuxR family protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R4Z6_9RHOB Length = 254 Score = 159 bits (402), Expect = 9e-38, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 94/237 (39%), Gaps = 9/237 (3%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPV--PFTRPKVAFYTNYPEAWVS 69 + + + E+ A++L ++ + + + + +N+ + WV Sbjct: 17 QFSQELWNCSSLQARWEELTRFAEKLGFEKGAYIIVPKIEGRVEDRQPICLSNHSQDWVE 76 Query: 70 YYQAKNFLAIDPVLNPENF-SQGHLMWNDDLFSEAQP----LWEAARAHGLRRGVTQYLM 124 +Y + ++ DP ++ + +W D + R+ GL+ GVT L Sbjct: 77 HYNSHHYYFKDPGMDHLLSGRKVDQLWTDYTVRPTSKVDSDFFNDVRSAGLKFGVTIPLE 136 Query: 125 LPN-RALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKR 183 N +G SF+ C ++ + ++ +L + + ++ F+ R Sbjct: 137 CSNKHLVGGASFASCERTQLGFDA-QMTSNYPVLKGAVHLFHTYAQEPETLSEFFGFTPR 195 Query: 184 EKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E E L W G+ + EIA IL++SE TV H K KK+ N+T A L+ Sbjct: 196 EHECLLWLTAGRANKEIAHILNLSEKTVEHHIKRACKKLRVTNRTHAVARAMTFQLL 252 >UniRef50_B2IL02 Transcriptional regulator, LuxR family n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IL02_BEII9 Length = 255 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 53/236 (22%), Positives = 92/236 (38%), Gaps = 11/236 (4%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 R ++ + H E L + +++L + + T+YP+ WV + Sbjct: 14 EYQRRIDSADSLCALSHLTEEMCLSLGFPWFTLIRGKQLAKRDDRSILLTSYPQDWVDHV 73 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYLMLP 126 + DPV + L WN+ L S E+AR HGL G T L L Sbjct: 74 LKEKRHLDDPVHFAASRLVNGLSWNEIGQYVTLNSRQIETLESARRHGLNTGFTIPLRLD 133 Query: 127 NRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRL--NDEIVMTPEMNFSKRE 184 S ++ R+ +++ E +L L+ + L D + TP ++ S R+ Sbjct: 134 GFENAMFSMAK---RKANVITSEERLLACLVGSVTFARAHALVTADAGIFTP-VHLSPRQ 189 Query: 185 KEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + + A+G + EIA L IS TV + ++ + Q+A A G + Sbjct: 190 VDCVALLAKGYSDFEIARQLGISPETVREYITKARRSYGVKRRFQLAILAVRDGYL 245 >UniRef50_A3SQM2 Autoinducer-binding transcriptional regulator LuxR n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SQM2_9RHOB Length = 251 Score = 158 bits (400), Expect = 1e-37, Method: Composition-based stats. Identities = 53/242 (21%), Positives = 84/242 (34%), Gaps = 17/242 (7%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 T+L R + +E + L+ D C + + P W + Y Sbjct: 11 TILSRLDTEAGLSSLPATVEALRRALKVDQILFC----SSTGPDRSQNWHTLPPGWTARY 66 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGLR-RGVTQYLMLPNR 128 + + IDPV W D A+ L A AHG+ +G T PN Sbjct: 67 AQQGYHRIDPVRAEAQRRVTPFDWRPLDWQRPAARALRADAVAHGIGPQGFTIPAHGPNG 126 Query: 129 ALGFLSF-SRCSAREIPILSDELQLKMQLLVRESLMALMRLNDE---------IVMTPEM 178 L LS + L+ + + L +M D P Sbjct: 127 QLALLSITADRDDATWTDLTRANRFALILAAHALHHKIMSQPDAGLGEDPDSAAATPPAP 186 Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 S RE +++ A G + +IA L+ISE+T+ + + + K+ A N A A G Sbjct: 187 RLSPRETDVITLLARGDSRGQIATKLAISEHTLRSYIETARHKLGAVNTPHAVARAIAMG 246 Query: 239 LI 240 +I Sbjct: 247 MI 248 >UniRef50_C6B9S9 Transcriptional regulator, LuxR family n=11 Tax=Rhizobiaceae RepID=C6B9S9_RHILS Length = 275 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 52/234 (22%), Positives = 87/234 (37%), Gaps = 14/234 (5%) Query: 19 RMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLA 78 R++ A E +I +A L YDY + P + N + Y+ + + Sbjct: 31 RIDQAFEAMKQIGFEA--LIYDYTPVPYDLDGAIMIPSLLKLRNISDDMHDYWFNRGYFR 88 Query: 79 IDPVLNPENFSQGHLMWNDD----------LFSEAQPLWEAARAHGLRRGVTQYLMLPNR 128 IDPV + WN D + + P+ + GVT + +P Sbjct: 89 IDPVQQVALRTSAPFFWNYDPDADTLINRFMTEDTAPVTRYLSERDMSTGVTVPVHMPRG 148 Query: 129 ALGFLSFSR-CSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT-PEMNFSKREKE 186 ++ R ++ + LL L D + + ++RE+E Sbjct: 149 DYATVTGIRFGRNKDFERHALRYIADFNLLAHVFHETAYSLFDTRAKSVGTIRLTERERE 208 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 LR +AEG ++ EI+ I+ S TV H KK+ A N+TQ A L+ Sbjct: 209 CLRHSAEGYSAKEISRIIDRSVPTVVMHLNAATKKLGARNRTQAVVRATHYRLL 262 >UniRef50_C6P1V2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1V2_9PROT Length = 690 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 48/230 (20%), Positives = 94/230 (40%), Gaps = 7/230 (3%) Query: 15 LRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVP-FTRPKVAFYTNYPEAWVSYYQA 73 + E+ + +DY+ + T T YP AW+ Y + Sbjct: 7 KSLLEVRNEAELRQRAQEVVVGFGFDYFLYATGLKMENSTTSFTKVITTYPAAWIEKYVS 66 Query: 74 KNFLAIDPVLNPENFSQGHLMWNDDLFSEAQP--LWEAARAHGLRRGVTQYLML-PNRAL 130 + +IDP + + +W+ + F A ++E AR HG+ G++ L + ++ Sbjct: 67 AGYASIDPAVRHSMERRTPYIWSAEAFESAGAGLMFEDARHHGIVSGMSVPLFDSASNSI 126 Query: 131 GFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRW 190 G + + C + L D ++ + L A R+ + + S++E L W Sbjct: 127 GGMGLA-CRSETCRGLEDIGRVVLFAL--YFQEAYSRIAVPFLHDEDGVLSRQEGACLGW 183 Query: 191 TAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 ++G A+IA L++ E V + + K++A + Q +A A GL+ Sbjct: 184 ISDGLDVAQIAQRLALPEAEVQQLLEQVLHKLDASSLPQAVAHAFAGGLL 233 >UniRef50_D2TJP9 Quorum sensing transcriptional regulator CroR n=24 Tax=Enterobacteriaceae RepID=D2TJP9_CITRO Length = 230 Score = 157 bits (397), Expect = 3e-37, Method: Composition-based stats. Identities = 50/206 (24%), Positives = 83/206 (40%), Gaps = 12/206 (5%) Query: 39 YDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDD 98 Y Y + + P ++ N P+ W Y + + IDPV+ S W + Sbjct: 31 YAYAIVNKKDP-----SQMRIINNNPQ-WFDIYLERKYQFIDPVIIRALSSVEDFYWENK 84 Query: 99 LFSEA----QPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKM 154 + ++ + H + +G T L L LS I + ++ M Sbjct: 85 VLLSGGYNLTRIFNESSEHNIYQGHTFPLHDYLNNLVVLSIISHKDSGIDMTANR-SYFM 143 Query: 155 QLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFH 214 LV+ + L ++ + S RE++IL+W + GKT AE+++ILSI+E TV FH Sbjct: 144 HFLVQ-LHQKTLNLYSKVHQKKNVFLSPRERQILKWVSAGKTYAEVSLILSITERTVKFH 202 Query: 215 QKNMQKKINAPNKTQVACYAAATGLI 240 N KK+ N L+ Sbjct: 203 MSNAMKKLGVNNARHAVKLGMELRLL 228 >UniRef50_Q2RSB6 Transcriptional regulator, LuxR family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RSB6_RHORT Length = 239 Score = 157 bits (397), Expect = 3e-37, Method: Composition-based stats. Identities = 53/225 (23%), Positives = 86/225 (38%), Gaps = 18/225 (8%) Query: 32 LQAQQLEY-----DYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPE 86 QA L + DY + H P + N P + + + IDPV + Sbjct: 17 RQAMALGFAAVLYDYSPVPRAHDGTLITPTILETRNLPVDMAEIWCKQGYYQIDPVQDAA 76 Query: 87 NFSQGHLMWNDD----------LFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFS 136 +W+ + L +E +P+ + R GL RGVT + AL + Sbjct: 77 LLVSAPFVWSHEGDQSDVMARVLRAEHRPVLDYLRHRGLTRGVTVPIRCGEGALATFTAI 136 Query: 137 RCSAREIPILSDELQLKMQLLVRESLMALM-RLNDEIVMTPEMNFSKREKEILRWTAEGK 195 S P ++ + LL + + + P ++ ++RE+E L EG Sbjct: 137 APSGAPFP--PEDRLSSLGLLGQSFHDRVYPGFPAASHLCPVVHLTRRERECLALCGEGL 194 Query: 196 TSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 T+ EIA + S TV FH +K+ A N+ Q AA L+ Sbjct: 195 TAKEIAYRIDRSVPTVVFHLSAATRKLGARNRFQAIARAAYYRLL 239 >UniRef50_A9D313 Putative AHL-dependent transcriptional regulator n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D313_9RHIZ Length = 239 Score = 157 bits (397), Expect = 3e-37, Method: Composition-based stats. Identities = 52/230 (22%), Positives = 93/230 (40%), Gaps = 6/230 (2%) Query: 15 LRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAK 74 F + + V + + + + + + T Y WVS Y + Sbjct: 10 TAFDSVRSCRTVEEAVFAFRAEYQVAHATYHLAQTTISALDSAYVRTTYSAEWVSRYLQR 69 Query: 75 NFLAIDPVLNPENFSQGHLMWND-DLFSEAQPLWEAARAHGLR-RGVTQYLMLPNRALGF 132 N++ IDPVL Q W++ ++ + PL+E A AHGL G + ++ N Sbjct: 70 NYVDIDPVLKEGVQRQLPFDWSELEMSAAVLPLFEDALAHGLGPSGYSIPIIDKNFRRAL 129 Query: 133 LSFSRCSAREI--PILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRW 190 LS + E +++ + MA+ ++ ++ S RE E L Sbjct: 130 LSINSFETGEAWSDLVNRHKAAWAEAAFLIHDMAMKEIHGGNDQA--LHLSPREIECLTL 187 Query: 191 TAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 A GK +IA+IL +S +TV + K+ + K+ + N Q A + +I Sbjct: 188 AARGKDHKDIALILGLSGHTVQGYLKSARHKLGSVNIPQAIAEAIRSRII 237 >UniRef50_A5G659 Transcriptional regulator, LuxR family n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G659_GEOUR Length = 250 Score = 157 bits (397), Expect = 3e-37, Method: Composition-based stats. Identities = 57/238 (23%), Positives = 94/238 (39%), Gaps = 16/238 (6%) Query: 13 MLLRFQRMETAEEVYHE--IELQAQQL-EYDYYSLCVR---HPVPFTRPKVAFYTNYPEA 66 +L + V I + + L +D+ + H T + ++ YP Sbjct: 16 LLEIVNSCVSCSNVTEAGSIANKTRDLIGFDHAVYGLAKLNHHGCITAYETLNFS-YPAE 74 Query: 67 WVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDL--FSEAQPLWEAARAHGLRRGVTQYLM 124 W+ Y+ NF +DP+ + W D + AA L G + Sbjct: 75 WLDAYRTNNFHLLDPITTENFKNYSLQYWKDTFNTYDVEAKFLSAALDFRLVDGYAIGIT 134 Query: 125 LPNRALG-FLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR-LNDEIVMTPEMNFSK 182 R G S S +E +L + LL A + L+ E + Sbjct: 135 NSFRTEGCIFSISGPIKKE-----PRNELVLNLLAPHLHQAFRQVLSVEKKGKISTTITI 189 Query: 183 REKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 RE+E+L W +GK+S +I+ IL+ISE TV FH N+ +K++A ++ A + GLI Sbjct: 190 REREVLNWIKKGKSSWDISTILAISERTVKFHVDNVMRKLDAVSRIHAVAVALSVGLI 247 >UniRef50_Q11IH2 Transcriptional regulator, LuxR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11IH2_MESSB Length = 241 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 50/244 (20%), Positives = 100/244 (40%), Gaps = 9/244 (3%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 M + + ++ + + EE + L + + L V P P Sbjct: 1 MLGGQDDALQAGIVETVRSAKNIEEAI-FLLRDGLGLAHVSFHLNVSGAAPLDYP--YVR 57 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND-DLFSEAQPLWEAARAHGLRR-G 118 T P W+S Y + ++ DPV+ S W++ ++ + + E AR+HG+ G Sbjct: 58 TTLPSQWISRYVLRTYVGHDPVMREGFSSLRPFSWHELEMSEKEREFMEDARSHGIGAQG 117 Query: 119 VTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEM 178 + + LS + + ++ + + ++ ++ S + + +E+ + Sbjct: 118 YSIPTVDRFSRRSLLSLT--ADLDLGLWAGFIRRHASSVIEISQVLHQKALNELGIGEPS 175 Query: 179 N--FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAA 236 + RE+E L WTA GK S +IA IL +SE TV + + ++K+ +Q A Sbjct: 176 GATLAPRERECLLWTARGKDSKDIAGILDLSEYTVRSYLRTARQKLQCRTLSQAVATATR 235 Query: 237 TGLI 240 +I Sbjct: 236 QRII 239 >UniRef50_C4XN36 LuxR family transcriptional regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XN36_DESMR Length = 257 Score = 156 bits (395), Expect = 6e-37, Method: Composition-based stats. Identities = 51/184 (27%), Positives = 79/184 (42%), Gaps = 9/184 (4%) Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDD--LFSEAQPLWEAARAHGLRRGV 119 NYP W+ Y+ KNF ID ++ S W+ A+ A L G Sbjct: 75 NYPVEWLQTYKEKNFSGIDVIVKRNFTSFTPQYWDHTYKAHKPAREFITLASDFNLIHGY 134 Query: 120 TQYL--MLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPE 177 T + SFS + P + +Q +V +A R+ + ++ Sbjct: 135 TYGARPFGFCKQASLFSFSGNFKKYDPTV----IAILQTIVPHLHLASSRIIESRLIQHN 190 Query: 178 MNF-SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAA 236 S RE+E+L W GK+S +I+ IL ISE TVN+H N+ KK++ N+ Q A Sbjct: 191 RKLLSGREREVLSWLKHGKSSWDISTILQISECTVNYHIYNIIKKLDVQNRPQAVAVATH 250 Query: 237 TGLI 240 G++ Sbjct: 251 LGIL 254 >UniRef50_B3VN68 PanR n=1 Tax=Pantoea sp. CWB304 RepID=B3VN68_9ENTR Length = 246 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 54/229 (23%), Positives = 100/229 (43%), Gaps = 19/229 (8%) Query: 24 EEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVL 83 + + +IE ++Y Y + +P+ ++ TN+ WV Y N+ +DPV+ Sbjct: 17 DHLAEKIEFYG-DVKYAYAIINKENPI-----EMMVLTNH-ADWVELYLKNNYQLVDPVI 69 Query: 84 NPENFSQGHLMWNDDLFSEAQ----PLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCS 139 S +W++D+ +AQ ++ + + ++ G T L N + LS Sbjct: 70 IKCLSSVESFLWDEDIMFKAQYKLPMIFRMGKNYDIKSGCTFVLHDYNNNMALLSIMMGE 129 Query: 140 ----AREIPILSDELQLKMQLL-VRESLMALMRLNDEIVMTPEMN---FSKREKEILRWT 191 + IL+D +L+ L+ +++L + EI+ + + RE ++L Sbjct: 130 HCREETKTSILNDRDRLQSLLISAHTKILSLYQEESEIIQQEKKKPGLLTSRENDVLYLA 189 Query: 192 AEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 ++GKT +EIA L + E TV FH N+ KK+ N LI Sbjct: 190 SQGKTYSEIACSLKVKEVTVKFHMANVVKKLGVMNAKHAINLGIELKLI 238 >UniRef50_B9LZZ1 Transcriptional regulator, LuxR family n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZZ1_GEOSF Length = 248 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 8/182 (4%) Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSE---AQPLWEAARAHGLRRG 118 +YPE W+ Y+ KNF +DP + ENFS L + +D + + + AAR L G Sbjct: 69 SYPEEWLITYKRKNFCQVDP-IAKENFSNFELQFWEDTYKKWNPPKEFISAARDFNLYNG 127 Query: 119 VTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEM 178 + + G L FS E + ++ L A + Sbjct: 128 IACGVRNLKSTEGSL-FSVAGKLE---NHPREKFIIENLTPHLHTAFTTYLSKTKAPVNF 183 Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 SKRE E+L W +GK+S +I++IL+IS TV FH +N+ K+NA ++T A + G Sbjct: 184 ELSKREIEVLNWVKKGKSSWDISVILAISVRTVKFHVENIMVKLNAVSRTHAVAIALSAG 243 Query: 239 LI 240 +I Sbjct: 244 VI 245 >UniRef50_C4K6Q5 Autoinducer response regulator n=2 Tax=Enterobacteriaceae RepID=C4K6Q5_HAMD5 Length = 235 Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats. Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 16/208 (7%) Query: 42 YSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFS 101 + V H F + +N P W Y N IDPV+ W++++ Sbjct: 28 FGYLVIHKKDFH--HICIISNCP-EWFDIYLEFNHQLIDPVVIKALSRVEDFEWDENILI 84 Query: 102 EAQ----PLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDEL---QLKM 154 ++ + + A+ + + RG T L + L LS + P+ +++ + KM Sbjct: 85 SSKLALPKVLDQAKTYDISRGHTFVLHDYKQNLAILSI----FDDRPLKTNDFFIDREKM 140 Query: 155 QLLVRESLMALMRLND--EIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVN 212 LL+ ++ L+ L + EI + SKRE EIL W + GKT EI+ I+ I E ++ Sbjct: 141 YLLLVKTHQKLLSLYEKFEIPTKKNIGLSKRENEILHWASIGKTYQEISKIIGIKECSIK 200 Query: 213 FHQKNMQKKINAPNKTQVACYAAATGLI 240 FH KN+ K+ A N A L+ Sbjct: 201 FHMKNITNKLGAINSRHAIKLAYELKLL 228 >UniRef50_C5B5L8 Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B5L8_METEA Length = 265 Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 95/253 (37%), Gaps = 28/253 (11%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQA 73 L +T+ ++ ++ A + +D ++ + T AW Y Sbjct: 13 LAAIDAAKTSADLPGILQATASKAGFDSFAFLDGRAETSVGGR--IITTVAPAWQETYAR 70 Query: 74 KNFLAIDPVLNPENFSQGHLMWNDDLFSE-------AQPLWEAARAHGLRRGVTQYLMLP 126 +N A DP + S W+D + E + AAR G G+ L + Sbjct: 71 ENLAAHDPCVRRVAESNSPFFWSDIVLPEDDRRPDLTRMTMTAARDMGYYDGLVMPLHMA 130 Query: 127 N----RALGFLSF--SRCSAREIPILSDELQLKMQLLVR---ESLMALMRLNDEIVMTP- 176 + R L LS + S ++ +++L + L L + V +P Sbjct: 131 DANGVRMLSSLSLFWADGSEDVRRVIGPRGPAVVKMLAAAWAQKLSDLGEAEAKPVQSPA 190 Query: 177 ---------EMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNK 227 + RE ++L W A+GKT+ E ++IL++ TV+ H N +K+ A NK Sbjct: 191 KVLTGLFGRPPKLTSREVDVLSWAAKGKTADETSVILALGRETVHTHLSNACRKLQASNK 250 Query: 228 TQVACYAAATGLI 240 T A LI Sbjct: 251 THAVAMAVHRRLI 263 >UniRef50_B5ZUI2 Transcriptional regulator, LuxR family n=8 Tax=Rhizobium RepID=B5ZUI2_RHILW Length = 240 Score = 153 bits (388), Expect = 3e-36, Method: Composition-based stats. Identities = 57/242 (23%), Positives = 97/242 (40%), Gaps = 20/242 (8%) Query: 13 MLLRFQRME-------TAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTR-PKVAFYTNYP 64 + F R+E T EV+ ++ Q L + + V F TN+P Sbjct: 3 LEAEFNRIEEVAAGFNTHYEVFKYMKGLTQDLGMTAFLIMTLPTVDFAEIGATKIITNWP 62 Query: 65 EAWVSYYQAKNFLAIDPVLNPENFSQGHLMWN------DDLFSEAQPLWEAARAHGLRRG 118 V YY A N + PV+ S ++ D + + E +G+ +G Sbjct: 63 AEMVDYYDAHNLMVDSPVIRRMLRSTSPFNYDVEAINTDRGEGKKSTVIELFNRYGMEKG 122 Query: 119 VTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEM 178 + G +S S +R ++ L + L+ + L L LN++ + Sbjct: 123 AYFPVHDAAGGRGAMSIS--GSRNFSMIEMAKLLFIATLIYDRLSQLT-LNEKHKP---I 176 Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 F++ E + LR TA G+ AEIA +L ++EN VN H + KK+ +TQ A Sbjct: 177 EFTRNELDCLRLTAGGRKGAEIAKLLDLTENAVNNHIGSAIKKLGCTTRTQAVVSALRLN 236 Query: 239 LI 240 ++ Sbjct: 237 IL 238 >UniRef50_D0DE55 Regulatory protein, LuxR n=1 Tax=Citreicella sp. SE45 RepID=D0DE55_9RHOB Length = 253 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 84/231 (36%), Gaps = 14/231 (6%) Query: 24 EEVYHEIELQA-QQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPV 82 + + +++ + YDY + P V N + ++ ++ +DPV Sbjct: 23 DAAFRQMQGVGFDGMIYDYTPMVSGPGADVPIPSVFEQRNLGDEMRQHWSEDEYIRLDPV 82 Query: 83 LNPENFSQGHLMWNDD----------LFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGF 132 S W+ D L + +P+ R + GVT + LPN Sbjct: 83 QRVAMRSAAPFCWSYDSDIDSIIRPMLTPDIEPVMSYLREREVFSGVTVPIHLPNGDFAT 142 Query: 133 LSFSRCSARE-IPILSDELQLKMQLLVRESLMALMRLN--DEIVMTPEMNFSKREKEILR 189 ++ R+ + + L+ + + L D T E+ + RE+E L Sbjct: 143 VTGVSLGRRQNWSGGTSRAIADLSLIAHLFNQSAVELLGFDHEDGTQEVRLTPRERECLT 202 Query: 190 WTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + + G ++ E A I+ S TV H +K+ A N+T A LI Sbjct: 203 YASFGNSAKETARIIDRSVPTVVMHLNAAMRKLGARNRTHAVTIATRRRLI 253 >UniRef50_A3SSF6 Transcriptional regulator, LuxR family protein n=3 Tax=Rhodobacteraceae RepID=A3SSF6_9RHOB Length = 248 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 45/230 (19%), Positives = 84/230 (36%), Gaps = 9/230 (3%) Query: 17 FQRMETAEEVYHEIELQAQQLEYDYYSL-CVRHPVPFTRPKVAFYTNYPEAWVSYYQAKN 75 + + + ++ ++ A+ ++ + + A P + Y ++ Sbjct: 14 LREVSSVSALWLLVQRFAKAQDFRTVTYHSIDVQSLGDTSFGAVAIGIPAEFHRMYTEEH 73 Query: 76 FLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYLMLPNRAL 130 DP W D L + + AR G G+ + P Sbjct: 74 LYLDDPFPPFAASQITPFFWRDLPQLTTLTEKQKAYLNRAREFGFADGLVCQVFGPQARN 133 Query: 131 GFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRW 190 +S R P +D L + + + + M L P S RE E+LRW Sbjct: 134 ALVSIGFHPDRPRP--TDAEVLDLHVASQFAHMRFCALVAGPAA-PNRRLSPRELELLRW 190 Query: 191 TAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 A GK++ IA I+ +S +TV+ + + K++ ++T+ A A GLI Sbjct: 191 IARGKSNTSIAQIMGVSRHTVDTIMRRLFGKLDVTDRTRAAVRGLAFGLI 240 >UniRef50_B9JSF3 Transcriptional regulator LuxR family n=5 Tax=Rhizobium/Agrobacterium group RepID=B9JSF3_AGRVS Length = 230 Score = 150 bits (378), Expect = 6e-35, Method: Composition-based stats. Identities = 52/237 (21%), Positives = 95/237 (40%), Gaps = 18/237 (7%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVA----FYTNYPEAWVS 69 + +T +V+ ++ + + VP K TN+P ++S Sbjct: 1 MRELSGYKTQFDVFRLMKRLTDFFGAKGF---MVMNVPSAGAKTLTGSSVITNWPADFLS 57 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQ--PLWEAARA----HGLRRGVTQYL 123 Y + L+ P+ N + ++++ + + + E A G+ RG + Sbjct: 58 EYDMASLLSSSPMFNRLRNTSIPVVFDVHVVARERDPKTVELATDLFLRFGMPRGACFPV 117 Query: 124 MLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKR 183 + G ++ E+P S + +Q L L + + E ++R Sbjct: 118 HDAHGNRGAVNIC----GEMPAFSFVDMVLLQYLAGHVFNRLAEIRELDARVTE-TLTER 172 Query: 184 EKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E E L WTA GKTS EIA I+ +SE+T+N + +K++ N+TQ A LI Sbjct: 173 EIECLTWTAAGKTSVEIAEIMGLSEHTINHYLNRATRKLDTVNRTQAVAKALRLSLI 229 >UniRef50_A6U6L7 Regulatory protein LuxR n=3 Tax=Rhizobiaceae RepID=A6U6L7_SINMW Length = 246 Score = 149 bits (377), Expect = 6e-35, Method: Composition-based stats. Identities = 50/232 (21%), Positives = 93/232 (40%), Gaps = 18/232 (7%) Query: 19 RMETAEEVYHEIELQAQQLEYDYY-SLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFL 77 +E ++V + ++ + + L + + A T +P ++ Y + + Sbjct: 22 SIENEDDVRGALGRVSEGFGFRGFMVLAIPDSGSHSLTAQALMTTWPMDFLRRYDSARLI 81 Query: 78 AIDPVLNPENFSQGHLMWNDDLFSEAQ---------PLWEAARAHGLRRGVTQYLMLPNR 128 PV+ S ++ + + ++E A + RGV + Sbjct: 82 DGSPVIQRLRRSTIPFTYDAHQLARGRVDGKGEAAICVFEQA---NMPRGVYLPVHDAAG 138 Query: 129 ALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEIL 188 ++F + EL L LL S ++ +R D + S+RE E L Sbjct: 139 HRAAVAFGGDRSAVSGDELQELNLWAGLL--YSRLSEVRTRDRRGPG---SLSRREIECL 193 Query: 189 RWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 RW A GKT+ E+A I+++SE TVN + +K+++ N+ Q A GLI Sbjct: 194 RWAAAGKTTVEMARIMALSEYTVNHYLNRATRKLDSVNRVQTVAKAIRAGLI 245 >UniRef50_A8LML2 Putative transcriptional regulator n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LML2_DINSH Length = 265 Score = 149 bits (377), Expect = 7e-35, Method: Composition-based stats. Identities = 45/189 (23%), Positives = 78/189 (41%), Gaps = 8/189 (4%) Query: 57 VAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAAR 111 +P WV Y + IDP+ +W++ L E E + Sbjct: 72 HIIAHGFPREWVDIYVDDHLYEIDPIPALAQRRAVPFLWSEVAELTRLAEEQAAFLERSM 131 Query: 112 AHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDE 171 + GV + PN G++ R + + +L + QL+ + + RL +E Sbjct: 132 PARVGDGVAIQVFGPNMRHGYVGMGF-GDRPRDVTAPQL-AEYQLVSQLMHLRACRLIEE 189 Query: 172 IVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVA 231 + E+ S RE E+L W A GK+ IA IL +S +TV+ + + +K+ ++T Sbjct: 190 RNRS-EIALSARETEVLGWMARGKSKTVIADILGLSPHTVDTLVRRIFRKLEVFDRTAAI 248 Query: 232 CYAAATGLI 240 A GL+ Sbjct: 249 LKAINLGLV 257 >UniRef50_A6F7D7 Transcriptional regulator, LuxR family n=1 Tax=Moritella sp. PE36 RepID=A6F7D7_9GAMM Length = 244 Score = 148 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 46/226 (20%), Positives = 92/226 (40%), Gaps = 11/226 (4%) Query: 21 ETAEEVYHEIELQAQQLEYDYYSLCVRHPVPF--TRPKVAFYTNYPEAWVSYYQAKNFLA 78 ++ + + + + + ++ + + F T + F N E W Y + F Sbjct: 22 SNSDSISDILTKTNELIPFQAATIAIDTNIEFALTAKQQIFTQNLSEEWQEIYFQRKFFN 81 Query: 79 IDPVLNPENFSQGHLMWNDDLFSE---AQPLWEAARAHGLRRGVTQYLMLPNRALGFLSF 135 DP+L+ + + W + + ++ + G++ + + +S Sbjct: 82 QDPILSAIANTTSAVDWRTATSQANYISDDFKQMSKKYVGSDGLSILVKTDVGST-LISL 140 Query: 136 SRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTP-EMNFSKREKEILRWTAEG 194 + L E ++ + R + I + + N SKRE E+L W EG Sbjct: 141 VIPESS----LDAEHNQLIEYIAPHIHEVFNRQGENIRKSLWKPNLSKRELEVLNWAKEG 196 Query: 195 KTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 K++ + ++IL+ISE TV FH N+ KK+ N++Q A GL+ Sbjct: 197 KSNWDTSLILAISERTVKFHFSNIFKKLEVVNRSQAIARAIHFGLV 242 >UniRef50_A6U9S1 Regulatory protein LuxR n=3 Tax=Rhizobiaceae RepID=A6U9S1_SINMW Length = 246 Score = 147 bits (372), Expect = 2e-34, Method: Composition-based stats. Identities = 52/234 (22%), Positives = 86/234 (36%), Gaps = 10/234 (4%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQA 73 ++ + E + + + + +P + + Y Sbjct: 13 IVEYGGCADPERFFALMR---RTFNIAHLLYLEAESLPDGLRICRLHHTFGAYAAEVYAV 69 Query: 74 KNFLAIDPVLNPENFSQGHLMWNDDL--FSEAQPLWEAARAHGLR-RGVTQYLMLPNRAL 130 + IDP+L + W F E +PL+ AA GL GV L P + Sbjct: 70 RGLHRIDPILKLALGGVRPVEWATARRRFPECEPLFVAAEEIGLSTEGVALPLPSPAGRM 129 Query: 131 GFLSF-SRCSAREIPILSDELQLKMQLLVRESLMALMR---LNDEIVMTPEMNFSKREKE 186 L+ + S E QL +++ + + ++ + RE E Sbjct: 130 ALLAISANMSPVEWSAYRRCHLRDFQLAANLFHASMLEHSAMAGAMEDERDLRLTGRETE 189 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +L W+A GK+ EIA IL ISE TV F N ++K+N + TQ +A LI Sbjct: 190 VLTWSAAGKSYWEIATILGISERTVRFFMTNARRKLNVVSNTQAVAHAVRHALI 243 >UniRef50_A6U6L8 Regulatory protein LuxR n=3 Tax=Rhizobiaceae RepID=A6U6L8_SINMW Length = 286 Score = 147 bits (372), Expect = 3e-34, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 92/248 (37%), Gaps = 14/248 (5%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTR-PKVAF 59 M D D R+ET ++ + Q + + +C V R Sbjct: 44 MTDID-LPRGGDFASEIARLETQFDIIRYMRRITQIFGFKTFLICSIPAVEVERLSATTV 102 Query: 60 YTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHL-----MWNDD--LFSEAQPLWEAARA 112 +N P ++ Y + + L + + W + A + R Sbjct: 103 ISNMPAELLNKYDSLSMLRFSTGVRRLRETTTPFQILLEDWEKEGGKPDAAADYFAMLRE 162 Query: 113 HGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEI 172 +GL + + G + A L +++Q++ L + + Sbjct: 163 NGLLQANYFPVHDAEGGRGAVILMGPEAG----LPMTAAMELQMIAIHVYNRLAEI-GSV 217 Query: 173 VMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVAC 232 S+RE + L WTA GKTS+EIA IL +SE+TVN + ++ KK++A N+TQ Sbjct: 218 WKNTNTVLSEREIQCLNWTAAGKTSSEIAGILGLSEHTVNHYLNHVTKKLDAVNRTQAVV 277 Query: 233 YAAATGLI 240 A G I Sbjct: 278 KAMKKGYI 285 >UniRef50_C8Q1R2 Transcriptional regulator, LuxR family n=4 Tax=Enterobacteriaceae RepID=C8Q1R2_9ENTR Length = 243 Score = 146 bits (369), Expect = 6e-34, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 87/191 (45%), Gaps = 6/191 (3%) Query: 56 KVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEA----QPLWEAAR 111 + F +++P+ Y + +DPV+ H W+++L + + ++E + Sbjct: 43 DMIFISDFPDEISDNYLNNKYQYVDPVIINALSRFTHFSWDENLKINSMWTVKRIFEKIK 102 Query: 112 AHGLRRGVTQYLMLPNRALGFLSFSRCS--AREIPILSDELQLKMQLLVRESLMALMRLN 169 +H + RG L N L L F +I + ++ + ++Q ++ ++ L+ + Sbjct: 103 SHNIIRGHAFVLHENNNNLAMLLFYIDKFLTSDIDDVFNKNRDELQGVLIDTHEMLLSVY 162 Query: 170 DEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQ 229 E E FS RE EIL W ++G T +++A +L+I+ +T+ FH + KK+ N Sbjct: 163 SEGEEVKEDVFSARESEILYWCSKGYTYSQVAEMLNITVSTIKFHMGKVVKKMGVKNAKH 222 Query: 230 VACYAAATGLI 240 +I Sbjct: 223 AISLGIELKMI 233 >UniRef50_B8IHS1 Transcriptional regulator, LuxR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IHS1_METNO Length = 242 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 81/238 (34%), Gaps = 12/238 (5%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 + + + A ++ Y + + + + Y WV + Sbjct: 8 QRFVDEIHAASDEGGLVGAASRMADRMGYRWIAYLSMTDA----QEHEITSTYAPPWVEH 63 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYLML 125 Y A N+ IDP + W ++ L++ AR++G+R G+T ++ Sbjct: 64 YFANNYEQIDPCVLASREQSQPFRWGSLGPPIEIPENVLRLYDDARSYGIRAGITIPILG 123 Query: 126 PNRALGFLSFSRCSAREIPIL--SDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF-SK 182 P+ + + + + +D L M ++ + L+ + Sbjct: 124 PSGRWSAFTMATDESETEALARQTDYLTSMMTMMALQFHARLLITAPRFSAETRPKLLTD 183 Query: 183 REKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + L+ A G+ A L ++ TV H +K++ A N T A GLI Sbjct: 184 VQARCLQAVANGEPMKVAAHELGLTHRTVIHHLNMARKRLGAKNITHTVKTAFHLGLI 241 >UniRef50_Q4KAK4 Transcriptional regulator, LuxR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KAK4_PSEF5 Length = 240 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 59/240 (24%), Positives = 112/240 (46%), Gaps = 14/240 (5%) Query: 10 RRTMLLRFQRM----ETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPE 65 RR+ + F+R+ + +E+ E+E + E+ S +R + V +Y Sbjct: 6 RRSPEIEFKRVNIPSKLCDEIRTELERETNHTEF---SFILRSDLKSHSKVVYNIDSYSY 62 Query: 66 AWVSYYQAKNFLAIDPVLN-PENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLM 124 AW Y+A+ F +DP+L +W+DD F E++ +A + +G G++ L Sbjct: 63 AWRRDYEAEKFWIVDPILKIHSPTPYFPTIWSDD-FIESKLFLQAGKDYGFLSGMSIGLP 121 Query: 125 LPNRALGFLSFSRCSAREI----PILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 G LS + + P+ LK+ + + + L I + Sbjct: 122 CSFGNYGVLSIASLKQGSLQGVDPLDWSACVLKVYAKLIDYINRQHSL-QRIFNDHQQAL 180 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + RE +ILR+TA+G +S +IAM + +S++++++H + +K+++PNK Q A G I Sbjct: 181 NDREIDILRYTADGMSSTDIAMRMHLSKSSIDYHIAKILQKLDSPNKHQALALAIKKGKI 240 >UniRef50_Q6FD15 Putative transcriptional regulator, luxR family n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FD15_ACIAD Length = 246 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 48/236 (20%), Positives = 91/236 (38%), Gaps = 12/236 (5%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTR---PKVAFYTNYPEAWV 68 L + ++ E+++ + AQ +++D +C P Y N+ + Sbjct: 14 QTLRQIRQASKIEDIFDVVVEFAQNIDFDRLIICSIAPHGKEELIDEVFFVYGNWTDR-T 72 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDL----FSEAQPLWEAARAHGLRRGVTQYLM 124 + + +L P+ W E + + G GV + Sbjct: 73 NIEERNKYLRNCPITRHIFDYDEPFFWTKTFNKNNSKETYRVIKNISERGEESGVQVPIF 132 Query: 125 LPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKRE 184 G +SF+ ++ L + + +Q + + + ++ ++RE Sbjct: 133 GRTGLEGAISFA----GKLSDLGADFRFILQSVCVTAFREIQSKRSLNLLRENSVLTQRE 188 Query: 185 KEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 KEIL+WTA G+ +EIA IL ISE TV H ++++KK+ + Q A G I Sbjct: 189 KEILKWTAVGRKQSEIAEILKISERTVENHLRSIRKKLEVKSTGQAIASALLKGEI 244 >UniRef50_A5VH61 Regulatory protein, LuxR n=2 Tax=Sphingomonas RepID=A5VH61_SPHWW Length = 289 Score = 144 bits (364), Expect = 2e-33, Method: Composition-based stats. Identities = 48/226 (21%), Positives = 91/226 (40%), Gaps = 7/226 (3%) Query: 18 QRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFL 77 ++ T ++V ++ +Q + +++L + T K T YP W+ Sbjct: 58 RQATTLDQVKSLLDAIVRQFGFRWFALVHNVDLKRTTCKALLITTYPVRWIEEIMESRLY 117 Query: 78 AIDPVLNPENFSQGHLMWN---DDLFSEAQPL--WEAARAHGLRRGVTQYLMLPNRALGF 132 DPV + L W+ D + A+ L E RAHGL G T + + + Sbjct: 118 LEDPVHAACVKTVSGLSWDQIGDYIAPNARQLSILERGRAHGLASGFTMPIRMRDEPDAM 177 Query: 133 LSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTA 192 + +R + I S +L + A L + + + S R+ + + A Sbjct: 178 FTVAR--QGDETISSPDLLCARLIGTVAFDQARTLLGPDELANVPIALSPRQIDCIDLVA 235 Query: 193 EGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 +GK+ EI IL +S +TV+ + + +++ +TQ+ A G Sbjct: 236 QGKSDWEIGQILGLSRDTVHEYVEGARRRYGVRRRTQLVLRAVRDG 281 >UniRef50_A9DE85 Probable transcriptional regulator protein, LuxR family n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DE85_9RHIZ Length = 246 Score = 143 bits (362), Expect = 4e-33, Method: Composition-based stats. Identities = 53/229 (23%), Positives = 91/229 (39%), Gaps = 7/229 (3%) Query: 17 FQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTR----PKVAFYTNYPEAWVSYYQ 72 ++ T + + + Y+S+ + ++ +++P ++ Y Sbjct: 17 ISKIRTTFDAIQVLRKTCLSYGFRYFSVLTIPAMVSESAQVMSHISVISSWPPELIADYD 76 Query: 73 AKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGL--RRGVTQYLMLPNRAL 130 PVL L++ + + E A A L R GVT + P + Sbjct: 77 RLELGKNSPVLERLRKQITPLLFEVENIDSERDGAEQASAKELFTRFGVTMGVYFPVQDG 136 Query: 131 GFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRW 190 F+ C LS + + + L ++ T ++ + RE E+L+W Sbjct: 137 RGQRFAVCFMGARKPLSATELPSLAMFATLLVDQLSQITANE-DTAKLVLNARETEVLQW 195 Query: 191 TAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 TAEGKTSAEIA I +SE+TVN + +K+ N+TQ A GL Sbjct: 196 TAEGKTSAEIARITGLSEHTVNHYATIATQKLGCSNRTQAVVQAIRLGL 244 >UniRef50_A5P6U9 Transcriptional regulator, LuxR family protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P6U9_9SPHN Length = 211 Score = 143 bits (362), Expect = 4e-33, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 84/212 (39%), Gaps = 12/212 (5%) Query: 36 QLEYDYYSLCVRH--PVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHL 93 + D +S +R + W+ Y + +F DP+ + + + Sbjct: 3 RFGADKFSYHFTPVFGSQVSRETQVVARGFSMDWLDLYDSADFRQCDPIPDEVMRAGHTI 62 Query: 94 MWNDDL-----FSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSD 148 W + L E + A R +G+ G L P+ + +F + ++ Sbjct: 63 SWEEALDRAEHTPEVERFIAALREYGIANGFGVPLYGPDNRDAYAAFGFPAEV---TPTE 119 Query: 149 ELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISE 208 E + + ++ R + + +L + E++ S+RE E+LR A GK+ IA +L IS Sbjct: 120 EQIVALTMVARTAHDRVCQLV--TIEEGEISLSQRELEVLRLIAHGKSKPVIAQLLEISA 177 Query: 209 NTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +TV + K + K+ ++ A LI Sbjct: 178 DTVGTYVKRLYAKLGVSDRVGATVKALKLKLI 209 >UniRef50_P54294 Transcriptional activator protein traR n=14 Tax=Rhizobium/Agrobacterium group RepID=TRAR_AGRT5 Length = 234 Score = 142 bits (359), Expect = 8e-33, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 76/220 (34%), Gaps = 11/220 (5%) Query: 26 VYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNP 85 + + A+ + Y+ + TNY W S Y NF +DPV+ Sbjct: 21 LKDGLADLAEHFGFTGYAY-----LHIQHKHTIAVTNYHRDWRSAYFENNFDKLDPVVKR 75 Query: 86 ENFSQGHLMWNDD-----LFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSA 140 + W+ + L E + + A G+R G+T + N ++ + + Sbjct: 76 AKSRKHVFAWSGEQERSRLSKEERAFYAHAADFGIRSGITIPIKTANGSMSMFTLASERP 135 Query: 141 REIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEI 200 I + + V + + L + +E LRW A G T E+ Sbjct: 136 A-IDLDREIDAAAAAGAVGQLHARISFLQTTPTVEDAAWLDPKEATYLRWIAVGMTMEEV 194 Query: 201 AMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 A + + N+V + K+ + +K + A LI Sbjct: 195 ADVEGVKYNSVRVKLREAMKRFDVRSKAHLTALAIRRKLI 234 >UniRef50_O54452 Transcriptional activator protein raiR n=9 Tax=Rhizobium RepID=RAIR_RHIET Length = 242 Score = 142 bits (359), Expect = 8e-33, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 70/181 (38%), Gaps = 4/181 (2%) Query: 53 TRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQP--LWEAA 110 T YP WV Y+ +++ +IDPV+ + W+ + + ++ A Sbjct: 53 TDSNPLLMLTYPPEWVKQYRDRDYFSIDPVVRLGRRGFLPVEWSASGWDSGRAYGFFKEA 112 Query: 111 RAHGL-RRGVTQYLMLPNRALGFLSF-SRCSAREIPILSDELQLKMQLLVRESLMALMRL 168 A G+ R+GVT + P + S + +Q L M L Sbjct: 113 MAFGVGRQGVTLPVRGPQGERSLFTVTSNHPDAYWRQFRMDSMRDLQFLAHHLHDRAMVL 172 Query: 169 NDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKT 228 + + S+RE + L TA G + +I LSIS + V + + ++K+ + Sbjct: 173 SGMRKVADLPRLSRRELQCLEMTANGLLAKQICARLSISVSAVQLYLASARRKLTVATTS 232 Query: 229 Q 229 + Sbjct: 233 E 233 >UniRef50_A9D0L4 Putative LuxR/GerE family transcriptional regulator n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D0L4_9RHIZ Length = 245 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 91/248 (36%), Gaps = 13/248 (5%) Query: 1 MQDKDFF-SWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLC-VRHPVPFTRPKVA 58 M + D+ M R T ++ + Q +Y Y+ + + Sbjct: 2 MTECDYNQDRFEPMRQRLNNCTTQFDLLRLLREVTQFHQYTYFFIASGCDGATRSLADSI 61 Query: 59 FYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDD------LFSEAQPLWEAARA 112 T+ P V Y + P++ L D + L + + Sbjct: 62 IITSAPSDLVRRYDETGLMERSPLMRALGGRGTPLQCRLDETITAFTTEQQAALDDFSAE 121 Query: 113 HGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEI 172 + + + + F + +S + ++ + L R++ + Sbjct: 122 FNIDCCFITPVYHRDHGPAAVCFL----GKRNQMSFSEAANLAMISSLAHQKLRRVSAQP 177 Query: 173 VMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVAC 232 + ++RE+E L WT+ GKTS EIA ILS+SE+TVN + N +K++A N+TQ Sbjct: 178 SKA-DSPLTERERECLVWTSSGKTSVEIARILSLSEHTVNHYLNNAARKLDAVNRTQAVA 236 Query: 233 YAAATGLI 240 A G I Sbjct: 237 LAIRQGFI 244 >UniRef50_D1SY03 Transcriptional regulator, LuxR family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SY03_9BURK Length = 264 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 47/231 (20%), Positives = 94/231 (40%), Gaps = 18/231 (7%) Query: 28 HEIELQAQQLEYD-----YYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPV 82 + A+++ +D + + + P V Y N P + + +DPV Sbjct: 24 DQTFSAAREIGFDAAIYDFSPVSMTPEGVLMTPSVLEYRNMPGPMRKLWVEQGMYQVDPV 83 Query: 83 LNPENFSQGHLMWNDDLFSEA--QPLWEAAR--------AHGLRRGVTQYLMLPNRALGF 132 G W+ E+ QP+ + + RGVT L +P Sbjct: 84 QALALRGSGAFFWSYHQDEESVLQPMLDGGARSVSSVLTEWRMTRGVTVPLHMPGNRFAT 143 Query: 133 LS--FSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTP-EMNFSKREKEILR 189 L+ + + + + + +++ + L+++ +I +TP ++ S RE E + Sbjct: 144 LTAMWQDDNFAQKKMSLVDSVMRLAYMAHILNDHLLKVFTKIQLTPRDVALSDREHECVL 203 Query: 190 WTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 AEG S +IA L+ +E+T+ FH ++ +K+ N+ Q+ AA G + Sbjct: 204 LAAEGMPSKQIAARLNRAESTIVFHLQSAARKLGGRNRAQMIARAAHFGYL 254 >UniRef50_A4ELE0 Transcriptional regulator, LuxR family protein n=5 Tax=Rhodobacteraceae RepID=A4ELE0_9RHOB Length = 202 Score = 140 bits (354), Expect = 3e-32, Method: Composition-based stats. Identities = 52/200 (26%), Positives = 82/200 (41%), Gaps = 16/200 (8%) Query: 41 YYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLF 100 Y +L + P +P+ W+++Y + F+ DPV+ + G + W Sbjct: 19 YIALRIGFAFPMEE-----VNAFPQGWIAHYTKQRFMLFDPVVKWAYGNVGTIRWFKLAE 73 Query: 101 SEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRE 160 + + + A+ G+R GVT + + A SF+ + + E++L + L R Sbjct: 74 DDPKRIIAQAQTFGMRFGVTVSVFDSS-ADAQRSFASFTRSDRDYTDLEVKLLLAYLTRR 132 Query: 161 SLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQK 220 P N +K E E L +GK EIA LS+SE V KN + Sbjct: 133 H----------NETAPPTNLTKAELEALGMVKDGKRLKEIAFELSVSEGAVKQRLKNAKL 182 Query: 221 KINAPNKTQVACYAAATGLI 240 K+ A TQ A A GLI Sbjct: 183 KLGAKTGTQAAALANQYGLI 202 >UniRef50_Q2YJ50 HTH-type quorum sensing-dependent transcriptional regulator vjbR n=35 Tax=Brucellaceae RepID=VJBR_BRUA2 Length = 259 Score = 140 bits (354), Expect = 3e-32, Method: Composition-based stats. Identities = 51/231 (22%), Positives = 82/231 (35%), Gaps = 16/231 (6%) Query: 24 EEVYHEIELQAQQLEYDYYSLCVRHPVP----FTRPKVAFYTNYPEAWVSYYQAKNFLAI 79 + + ++ Y + R V + P WV+ Y +KN+ AI Sbjct: 22 SDTLALLTRIRDEIGCRYVTHTYRGRVGDCTKVNSADLTVLMTLPATWVARYSSKNYFAI 81 Query: 80 DPVLN----PENFSQGHLMWN----DDLFSEAQPLWEAARAHGLRR-GVTQYLMLPNRAL 130 DPV + + D+ L A HGL + P Sbjct: 82 DPVFQEDAPYYRNDTSAIARDLKEDADICPAVAELLHDAEKHGLGNLFIAVSARNPKGVA 141 Query: 131 GFLSFSR-CSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILR 189 G F+ + ++ ++ L + D + + RE + LR Sbjct: 142 GCTVFTFEVEDEDRTQFLARMRPRLLSLAGIIHGTVCGCKD--ANSVASLLTPREVDCLR 199 Query: 190 WTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 W A GKT EIA ILSI+ TV + +N + K+N N+T A + G+I Sbjct: 200 WAANGKTDGEIAEILSIARWTVVTYLQNAKIKLNCSNRTSAVATALSLGII 250 >UniRef50_Q28MF2 Transcriptional regulator, LuxR family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28MF2_JANSC Length = 243 Score = 140 bits (353), Expect = 4e-32, Method: Composition-based stats. Identities = 51/238 (21%), Positives = 91/238 (38%), Gaps = 10/238 (4%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 + M V+ + A L + +L + P R F TN P + Sbjct: 6 QDFSEDIIGMTGPRAVWAGMAHLADDLGMPFCTLTMARRAPDLRSS-QFITNLPAPFQDT 64 Query: 71 YQAKNFLAIDPVLNPENF--SQGHLMWNDDLFSEAQP----LWEAARAHGLRRGVTQYLM 124 Y F+ DP L+ + M + D EA + R+ G+ + + Sbjct: 65 YCEGGFINDDPFLSLICRDMTAAGFMTDPDDLPEADQRQGAFLDLTRSFGVGTALCIPVR 124 Query: 125 LPNRA--LGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSK 182 ++ G++ AR++ + +++QL + L L + S Sbjct: 125 TTRQSEFGGWVIGGDLRARDVADGREIAAMQLQLAGLIAFERLSVLTRQANHAHR-RLSP 183 Query: 183 REKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 RE+E L+W + G +IA L ISE+ V+ + KN ++K A + Q +A +G I Sbjct: 184 RERECLQWLSAGLRVTQIAHRLDISESAVHLYIKNARRKFGARTREQAVAHAIVSGEI 241 >UniRef50_B3DZX3 Transcriptional regulator LuxR family n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DZX3_METI4 Length = 251 Score = 139 bits (350), Expect = 8e-32, Method: Composition-based stats. Identities = 44/190 (23%), Positives = 79/190 (41%), Gaps = 7/190 (3%) Query: 58 AFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSE-----AQPLWEAARA 112 ++P +++Y + + DPV+ +G+++ ++F + A Sbjct: 60 IINHSFPSDLIAFYLQQKYQKADPVVKTALRLRGNIVRRTEIFRYFQDNFRSQYLKDASD 119 Query: 113 HGLRRGVTQYLMLPNR-ALGFLSFSRCSAREIPILSDELQ-LKMQLLVRESLMALMRLND 170 L G++ ++ SF + P L LK L + + + + Sbjct: 120 ISLHTGLSFGIVEEKTYRASLFSFCDKEIEKSPRHETILNGLKYPLHLALLNCSHPQEVE 179 Query: 171 EIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQV 230 + + RE EIL+W +GKT+ EI+ IL ISE TV FH KN+ K++ N+ Q Sbjct: 180 KPAKESPQALTARELEILKWIMDGKTNWEISCILKISEATVKFHLKNIFLKLDVQNRCQA 239 Query: 231 ACYAAATGLI 240 A L+ Sbjct: 240 VATAFHRRLL 249 >UniRef50_A5VEI3 Regulatory protein, LuxR n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VEI3_SPHWW Length = 301 Score = 139 bits (350), Expect = 9e-32, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 82/239 (34%), Gaps = 12/239 (5%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLC----VRHPVPFTRPKVAFYTNYPEAW 67 ++++ + + +E + +L + P P +P+ W Sbjct: 62 SLVVGLEASRSMDEAMDVLHGAILELGFPRVVYGCVSIAHLPSGTWVPAPLQVRGFPDRW 121 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWN------DDLFSEAQPLWEAARAHGLRRGVTQ 121 + A DP + W D L GL G+T Sbjct: 122 DRDWPRHR--AHDPYAHTAFLKMESTNWTVVQNNADLLDPAQVDCISYINDLGLNPGLTV 179 Query: 122 YLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFS 181 L +P GF++ + + + ++ + S Sbjct: 180 PLFIPGHHYGFITAVGDGGLDGWDAAADRAGPTLAMIANYFDNFAIRRFGGPPKESQSLS 239 Query: 182 KREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 KRE E L W+A GKT +IA+IL +S +TV + K + +K++A N++ A G+I Sbjct: 240 KRELECLTWSARGKTVEDIAVILDLSADTVRVYLKRVNQKLDAVNRSHAVAKAMCLGMI 298 >UniRef50_A9CI30 Transcriptional regulator, LuxR family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=A9CI30_AGRT5 Length = 238 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 50/230 (21%), Positives = 87/230 (37%), Gaps = 12/230 (5%) Query: 17 FQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY-TNYPEAWVSYYQAKN 75 + ++ Y + +L ++ P WV K+ Sbjct: 14 LSAAADKSQWLEALQEVMHAFGYAHVTLLRLPGGQNAFALPLVVESSLPV-WVVNAMTKD 72 Query: 76 FLAID-PVLNPENFSQGHLMWNDDLFSEAQPLWEAARAH----GLRRGVTQYLMLPNRAL 130 D PV+ S W+ + A A G+ G+ + + Sbjct: 73 GALGDCPVIKRGASSMMPQYWSLEDPEMACGSLVDAVNSVGSMGITSGLMVPVNGMSGNR 132 Query: 131 GFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRW 190 ++F+ + L ++ ++ +L RL P +KRE +++RW Sbjct: 133 HLMNFA----GDRDTLPQASLNELCMIALHALETYDRLCRVASKGPSP-LTKRELDVVRW 187 Query: 191 TAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 TA+GKTS EIA +LSISE+TVN + N +K++ N+TQ+ LI Sbjct: 188 TAQGKTSVEIAELLSISEHTVNTYMNNAMRKLDCVNRTQLVAKTIRLRLI 237 >UniRef50_D1RJW3 LuxR family transcriptional regulator n=1 Tax=Legionella longbeachae D-4968 RepID=D1RJW3_LEGLO Length = 247 Score = 137 bits (346), Expect = 3e-31, Method: Composition-based stats. Identities = 50/232 (21%), Positives = 91/232 (39%), Gaps = 11/232 (4%) Query: 10 RRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPK-VAFYTNYP-EAW 67 +++ R +++ E+ ++ + ++ + T K V + P +AW Sbjct: 1 MQSIKKRMAEVKSIHELNTLLKNYFWSISIKSFAFTYYNQHTKTGSKLVYEWATTPLDAW 60 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWND------DLFSEAQPLWEAARAHGLRRGVTQ 121 YY + + ID L S + W+ + + + GL +G+ Sbjct: 61 HKYYLQEGYADIDRTLEATEQSLLPIFWDVKEQLRLAKNKRMRRFKQESLIFGLDKGLCI 120 Query: 122 YLMLPNRALGFLSFS-RCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 L P L R + + + + + +L + LN++ + + Sbjct: 121 PLHGPKGEFVILVLHQRINEHGLKNWENHVDTWLGILHTYFHFLRLLLNEKKIGV--VPL 178 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVAC 232 +KRE+E LR TAEG IA +L IS+ TVNFH +N KK+ NK Sbjct: 179 TKREQECLRLTAEGFRLELIAQLLKISKRTVNFHLQNANKKLGVTNKYLAIM 230 >UniRef50_B9JII6 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JII6_AGRRK Length = 244 Score = 136 bits (342), Expect = 8e-31, Method: Composition-based stats. Identities = 50/233 (21%), Positives = 89/233 (38%), Gaps = 25/233 (10%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVR-------HPVPFTRPKVAFYTNY 63 + L + + + L + ++ + P+ +N+ Sbjct: 16 QPFLHQLELCTDIHSLEAVFSKTLSHLGFPMFAYNIHRMSASFIMNESTVDPQNFIISNF 75 Query: 64 PEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSE-----AQPLWEAARAHGLRRG 118 P W+++ + + IDP L QG W+D L S+ + L + A GL G Sbjct: 76 PNKWLTHDFHQKYKEIDPTLKWVGTGQGIAQWSDLLTSDDIDKNQRRLLQEAWDAGLTNG 135 Query: 119 VTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEM 178 +T +M +S E ++E L +V+ R I++ + Sbjct: 136 ITLPIMTELGEAVAISVV----PEPGTGNNERILAALPIVQILAQGYHRKAKGILLGHSL 191 Query: 179 N---------FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKI 222 S RE ++L W A GKT+ EIA ILSIS+ +V+F+ + K+ Sbjct: 192 KVGSARRKSFLSPREIDVLHWMARGKTAWEIAEILSISQKSVDFYTDMAKTKL 244 >UniRef50_B9JA22 Transcriptional regulator protein n=10 Tax=Rhizobium/Agrobacterium group RepID=B9JA22_AGRRK Length = 245 Score = 135 bits (341), Expect = 1e-30, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 87/239 (36%), Gaps = 17/239 (7%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPV-PFTRPKVAFYTNYPEAWVS 69 + ++T +V+ ++ + + + F + N+P ++ Sbjct: 14 EDYIDEIAGLKTQFDVFRFMKRVTDAYRCRAFMVVNLPSLTSFELQSNSVINNWPAELLT 73 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQ--------PLWEAARAHGLRRGVTQ 121 Y + L V S +++ + L+E + R + Sbjct: 74 VYDQEGLLRNSTVSRRLRVSTLPFVYDTAANTNRDDSKIQLRASLFE---RFRMARSICL 130 Query: 122 YLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFS 181 + G + S + + E + + L + + V + + Sbjct: 131 PTHDASGIRGAVILS----GDREAFTAEETKDLCYIAIHVFDRLAEIRNLDVRIVD-TLT 185 Query: 182 KREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 RE + L WTA GKTSAEIA IL++SE+TVN + KK++ N+TQ A GLI Sbjct: 186 DRELDCLNWTAAGKTSAEIAEILTLSEHTVNHYLNRATKKLDTVNRTQAVAKALRVGLI 244 >UniRef50_A5PE73 Transcriptional regulator, LuxR family protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PE73_9SPHN Length = 226 Score = 135 bits (340), Expect = 1e-30, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 88/228 (38%), Gaps = 11/228 (4%) Query: 19 RMETAEEVYHEIELQAQQLEYDYYSLCV-RHPVPFTRPKVAFYTNYPEAWVSYYQAKNFL 77 + ET ++ + L + ++ V P T V YPE ++ YQ + Sbjct: 2 QCETETDLVDLLWKHFGGLGFQGFAYMVPSRDSPLTM--VYKSRGYPEKFIETYQREKLY 59 Query: 78 AIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGF 132 IDP + L ++ L + + G+ G+ + + Sbjct: 60 LIDPFPAHVTRHKSTLRISEIAQQAKLSRAETDYIDRMKKMGITDGLIIPTFGMDLRI-- 117 Query: 133 LSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTA 192 + F + ++ ++ + ++ + L L + +RE EIL W A Sbjct: 118 VKFVLGQVTDFSVIENDNLFEFTATLQMAHRRLDELARQDEPI-RRRLPRREVEILHWIA 176 Query: 193 EGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +GKT+AEIA IL ++ TV H M +K++ ++ +A G+I Sbjct: 177 KGKTNAEIAAILGVAAPTVATHIARMFQKLDVNDRAALAVKGFRYGII 224 >UniRef50_C8QBU4 Transcriptional regulator, LuxR family n=2 Tax=Enterobacteriaceae RepID=C8QBU4_9ENTR Length = 262 Score = 135 bits (339), Expect = 2e-30, Method: Composition-based stats. Identities = 41/193 (21%), Positives = 77/193 (39%), Gaps = 9/193 (4%) Query: 56 KVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAA---RA 112 + N + + + Y + IDPV+ +W+ +L + + ++ Sbjct: 56 NILVINNISDEFANEYLENKYQNIDPVVITALNRVTSFIWDANLKINSHWPMDKVFIWKS 115 Query: 113 HGLRRGVTQYLMLPNRALGFLSF-----SRCSAREIPILSDELQLKMQLLVRESLMALMR 167 + G T L + + LS ++ + L + E L+ + R Sbjct: 116 YSFLCGHTFVLHDYHNNMATLSLYYDKYLMADVGDMIETHKNDFQGILLDIHEMLLQVYR 175 Query: 168 LNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNK 227 ++E+ + S RE EIL W++ GKT AE+A +L ++ +T+ FH KK+ N Sbjct: 176 KSEEVAAANTL-LSTREAEILYWSSTGKTYAEVAEMLQLTVSTIKFHMGKTVKKLGVKNA 234 Query: 228 TQVACYAAATGLI 240 A+ LI Sbjct: 235 KHAISLASELNLI 247 >UniRef50_B6B644 Response regulator receiver protein, putative n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B644_9RHOB Length = 211 Score = 134 bits (337), Expect = 3e-30, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 77/186 (41%), Gaps = 15/186 (8%) Query: 57 VAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND--DLFSEAQPLWEAARAHG 114 V ++ Y + WV Y + +L +DP + S G + W + LF ++ +E A +G Sbjct: 39 VFVHSTYAQRWVDRYVDQAYLLVDPTIQFGLSSTGWVTWKELERLFPSSKHFFEDAVKYG 98 Query: 115 LRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVM 174 L G T + A G +S CS E + +L++ +L AL E Sbjct: 99 LVHGNTLAIS----ADGRVSVLSCSGPEWS----DEELRIARAALYALHAL-----EYEP 145 Query: 175 TPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 + + + K++LR G EIA L + TV ++ + ++A Q+ Sbjct: 146 SHSITLTTPVKDVLRMMCNGCKDQEIAENLGVKLETVRARRRTAMQALDAKTSAQLISQV 205 Query: 235 AATGLI 240 GLI Sbjct: 206 IKFGLI 211 >UniRef50_A3WCG7 Two-component transcriptional regulator, LuxR family protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WCG7_9SPHN Length = 236 Score = 133 bits (336), Expect = 3e-30, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 86/224 (38%), Gaps = 11/224 (4%) Query: 24 EEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY--TNYPEAWVSYYQAKNFLAIDP 81 +V + QA + S V + A + + W++ Y + F DP Sbjct: 15 SDVLTYVRDQAIKAGAARMSYHVTPAFDQQTSRTAAVYAHGFSDEWMALYAKEEFRLTDP 74 Query: 82 VLNPENFSQGHLMWNDDLF-----SEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFS 136 + + W D + + + + + + L G L N + SF Sbjct: 75 IPGRVMQFGSLMTWQDAMSWQHNTPDQEAYFAKMKEYDLIHGFGIPLYGRNARDAYASFD 134 Query: 137 RCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKT 196 + + ++ E ++ L + + ++ L + + P S+RE E+L W A GK+ Sbjct: 135 FL--KHVDDVAPESIGMIRSLSQVAHQRVVILVEHKLDAPA--LSEREVEVLTWAARGKS 190 Query: 197 SAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + IA IL IS +T + K + K++ ++ A GL+ Sbjct: 191 LSAIATILDISPDTAKTYSKRIYAKLDVSDRVGAVVKALRMGLV 234 >UniRef50_Q7MYV6 Similar to transcription regulator n=2 Tax=Photorhabdus RepID=Q7MYV6_PHOLL Length = 238 Score = 133 bits (334), Expect = 6e-30, Method: Composition-based stats. Identities = 54/218 (24%), Positives = 89/218 (40%), Gaps = 2/218 (0%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 +L ++ +T E+ + L +++YS+ PFT K TN S Sbjct: 6 NEILSEIKKSKTMPELEKRLLNAINYLGFEFYSIYQEEKYPFTTKKYVLITNLNIETASN 65 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHG--LRRGVTQYLMLPNR 128 Y N D ++N + + ND + E + ++ ++ ++ + + Sbjct: 66 YNQDNNHDSDQLMNGDYTFSIPSVCNDKISKNTDFTIEKSNSNKNEVKNSLSIKIKGYHG 125 Query: 129 ALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEIL 188 S +R + +L E + L ++ S RE E++ Sbjct: 126 ERSIFSVARKEGTISHNEILNKAGVLGILANECIKTFNNLKNKKDKIIIPTLSTREVEVI 185 Query: 189 RWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPN 226 RWT EGKTSAEIA IL IS TVNFH N+ +K+ PN Sbjct: 186 RWTCEGKTSAEIADILDISTRTVNFHINNVMEKLVVPN 223 >UniRef50_D0X6W6 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0X6W6_VIBHA Length = 225 Score = 133 bits (334), Expect = 7e-30, Method: Composition-based stats. Identities = 47/231 (20%), Positives = 94/231 (40%), Gaps = 19/231 (8%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 + + + E+++ ++ ++++++ L + P ++ P+ + + Sbjct: 8 ELSNQLRCAESSDAIHAWFGELQNEIDFEFSILGLFGDDYAPDPVCYGFS--PDQFAN-C 64 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHG---LRRGVTQYLMLPNR 128 +K DP++ S +M + S P +G L G + Sbjct: 65 FSKKTAESDPLIAALQQSNHGIM--ALMDSHTHP------DYGKRLLLAGY----HGDKK 112 Query: 129 ALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEIL 188 A+ SF I + L L L + S + + E + PE + RE E+L Sbjct: 113 AIYLTSFGDRQPSSEEIDALYL-LTPHLYMASSYVCDRNIRVETLPAPESQLTTRECELL 171 Query: 189 RWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 W GK++ EI+ +L+ISE TV +H +N+ +K++ N+T A G Sbjct: 172 PWLKLGKSNWEISRLLNISERTVKYHLQNIYRKLDVHNRTHAVSKAIELGW 222 >UniRef50_B4SS41 Transcriptional regulator, LuxR family n=3 Tax=Stenotrophomonas RepID=B4SS41_STRM5 Length = 234 Score = 133 bits (334), Expect = 7e-30, Method: Composition-based stats. Identities = 52/235 (22%), Positives = 85/235 (36%), Gaps = 14/235 (5%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYD-YYSLCVRHPVPFTRPKVAFYTNYPEAWV-- 68 LL +R ++ EV + A L YD + +V + W+ Sbjct: 6 QALLGLERADSLTEVGAILRSVAAPLGYDRVLVFATGTGLERDAQRVYWIEG---DWLGD 62 Query: 69 -SYYQAKNFLAIDPVLNPENFSQGHLMWNDD--LFSEAQPLWEAARAHGLRRGVTQYLML 125 S +L PV S W+ E + + R GL G+ + Sbjct: 63 GSDTDLARYLHACPVNRHVLDSDAPFFWSKRQGARGERYQVVKQPRGDGL-HGLQVPVFG 121 Query: 126 PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREK 185 G +SF+ + S +L ++ + + RL + P S RE+ Sbjct: 122 TTGLEGAISFAGAAV----DASARARLLLEAVATAAFRTARRLAEAPAELPVGALSARER 177 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E+LRW A G+ AEIA L +S TV H + ++++ Q A+ G I Sbjct: 178 EVLRWVAAGRRQAEIAATLGLSARTVENHLRRARQRLGVATTAQAVRAASRRGEI 232 >UniRef50_Q1YE62 Possible transcriptional regulator, lysR family n=2 Tax=Aurantimonadaceae RepID=Q1YE62_MOBAS Length = 294 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 54/240 (22%), Positives = 89/240 (37%), Gaps = 22/240 (9%) Query: 14 LLRFQRMETA-EEVY--HEIELQAQQLEYDYYS-LCVRHPVPFTRPKVAFYTNYPEAWVS 69 L R R+ +E+ + A + + + L V +N+ E++ Sbjct: 63 LDRLNRLAPPWDEIALTQLLGDVATDFGFSHAAVLSVPSTDDGGTATRLLLSNWSESFGQ 122 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWN---------DDLFSEAQPLWEAARAHGLRRGVT 120 Y+ V+ +W+ D A+ L EA G Sbjct: 123 AYEQLGLHRSKLVVGALKTDPMPFVWDIDTLYGADEPDPSPAARMLMEAE----YLAGAF 178 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 + G LSF+ S EL L L ++A R + P Sbjct: 179 FPVHGLTAFNGALSFAGRSCALPAEAIRELHLFAFAL--FGMLAAARFEENRRNNP---L 233 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 S RE++ L+ GKTS+EI +ILS+SE T++ + Q+K++A N+T AA G + Sbjct: 234 SVRERDCLKLAMLGKTSSEIGIILSLSEYTISQYLTAAQRKLDASNRTHAVALAAQLGYL 293 >UniRef50_B7UX52 Probable transcriptional regulator n=5 Tax=Pseudomonas aeruginosa RepID=B7UX52_PSEA8 Length = 243 Score = 132 bits (332), Expect = 1e-29, Method: Composition-based stats. Identities = 60/244 (24%), Positives = 95/244 (38%), Gaps = 13/244 (5%) Query: 5 DFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKV----AFY 60 D+ S + R ++ T E V E+ A +L +D +C P P + + Sbjct: 3 DYASLLFDSVARLRKAATTEAVCREMVEFAARLGFDRVIVCSLFPRPGEDELIDELFFVH 62 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPL----WEAARAHGLR 116 ++ E S Q +L PV W+ + + + R G Sbjct: 63 GDWAEG-RSAQQRDAYLLHCPVTRHILELDEPFFWSKSPSEDPERMTYRIVRGVRDLGQV 121 Query: 117 RGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTP 176 G+ + N G +SF+ E L+ +L Q AL RL + Sbjct: 122 NGMQVPVFGRNGLEGAVSFA----GERLDLNAGCKLAAQAFCPILFFALKRLRGPVSAGD 177 Query: 177 EMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAA 236 S+RE+E+L+W A GK AE+A IL ISE TV H + ++++ A + Q A Sbjct: 178 AQALSEREREVLQWIALGKQQAEVAAILMISERTVENHLRAARRRLGAASTAQAVARALR 237 Query: 237 TGLI 240 G I Sbjct: 238 LGDI 241 >UniRef50_B9JZN6 Transcriptional regulator LuxR family n=1 Tax=Agrobacterium vitis S4 RepID=B9JZN6_AGRVS Length = 241 Score = 132 bits (332), Expect = 1e-29, Method: Composition-based stats. Identities = 58/240 (24%), Positives = 92/240 (38%), Gaps = 14/240 (5%) Query: 10 RRTMLL-RFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY-TNYPEAW 67 R+T+L ME+ E + AQ + S+ + T P + Sbjct: 6 RQTLLSTEITAMESREHCAEILRTVAQAFGLSHGSILLAPCATDVHLLPLVMETTLPMEF 65 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWN-------DDLFSEAQPLWEAARAHGLRRGVT 120 + F+ PV+ S W+ D + + L GV Sbjct: 66 GHEFDRHQFVKFCPVVKKFAGSILPRTWDMKFREPNDMAEEWPPAMRDLMMRFKLIVGVV 125 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 + L F+ F + LS ++ +L RL +M ++ Sbjct: 126 FIFPSLDSRLYFMRF----DGDRSPLSQCEVNELGMLAMAVFDTYDRLRRTELMNVDV-L 180 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 S RE E+LRWTA+GKTS EI ILS+S++T+N + KK++ N+TQ+ A LI Sbjct: 181 SVRELEVLRWTAQGKTSVEIGQILSLSDHTINAYMTTAMKKLDCVNRTQLVAKAIRLKLI 240 >UniRef50_C9D313 Transcriptional regulator AhyR/asaR family n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9D313_9RHOB Length = 229 Score = 131 bits (330), Expect = 2e-29, Method: Composition-based stats. Identities = 57/235 (24%), Positives = 88/235 (37%), Gaps = 25/235 (10%) Query: 20 METAEEVYHEIELQAQQLEYDYYSLCVRH-PVPFTRPKVAFYTNYPEAWVSYYQAKNFLA 78 + + VY ++ Q Q L YDY + H P F P++ E V + ++ Sbjct: 5 ADLVDAVYADLGPQVQGLVYDYSPVPFSHEPGRFVLPEIIEARGAAEVLVDDWCGRSLYR 64 Query: 79 IDPVLNPENFSQGHLMWN-----------DDLFSEAQPLWEAARAHGLRRGVTQYLMLPN 127 DPV +W+ D + + + E L RG+T L LP Sbjct: 65 ADPVQRRAAKILNPFVWSYHAEECSVIREDLGQGDVREVRERLLDWTLGRGMTVPLHLPG 124 Query: 128 RALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEM--NFSKREK 185 R LS E + M +L R +L A + V + + RE Sbjct: 125 RGFATLS-----------AFVEGRADMDMLARFALQAFELQDRISVELRQARGPLTLREA 173 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E L TA G ++ +IA L+ SE+ V H + K+ A N++ A G I Sbjct: 174 ECLSHTAAGLSAKQIAHELNRSESMVVKHLQAAASKLGARNRSHAVAIATRQGWI 228 >UniRef50_Q48KM4 Transcriptional regulator, LuxR family n=6 Tax=Pseudomonas syringae group RepID=Q48KM4_PSE14 Length = 240 Score = 131 bits (330), Expect = 2e-29, Method: Composition-based stats. Identities = 43/192 (22%), Positives = 69/192 (35%), Gaps = 19/192 (9%) Query: 57 VAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAH--- 113 N +AW Y+ + F+ DPV+ G + W D P+ Sbjct: 59 TFITCNVDDAWGKAYRQREFITQDPVIRCYRNQLGFVNWQDAF--RQYPVSACYEEIVVT 116 Query: 114 -----GLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRL 168 + G + + + +S E + M L+ L Sbjct: 117 CELLPAISYGYMNHCRGADSVTSVCTL----GEVGRAISAEQKYLMSSLMPVLHSVARGL 172 Query: 169 NDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKT 228 + RE E+L+W +GKT+ EI+MI +SE+TV +H K + K+ N+ Sbjct: 173 K-----FCSRGLTHRELEVLQWARDGKTAWEISMIRDVSESTVKYHLKTIYSKLGVANRA 227 Query: 229 QVACYAAATGLI 240 Q A GLI Sbjct: 228 QAVGEALCRGLI 239 >UniRef50_A3PQ79 Response regulator receiver protein n=3 Tax=Rhodobacter sphaeroides RepID=A3PQ79_RHOS1 Length = 238 Score = 130 bits (328), Expect = 3e-29, Method: Composition-based stats. Identities = 45/229 (19%), Positives = 85/229 (37%), Gaps = 18/229 (7%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQA 73 + R E+ E+ ++ L + YSL + P T +P Sbjct: 11 VGSISRAESRNELSQALKDAVVGLGFQTYSLAYQRPHALEAVTAPHLTTWP-------CE 63 Query: 74 KNFLAI-------DPVLNPENFSQGHLMWNDDLFSEAQ--PLWEAARAHGLRRGVTQYLM 124 ++ + DP+L+ L+W + + + + R G+ L Sbjct: 64 QDGASDPASARIRDPLLDYAVTGIKPLIWRSGSWKSLRKYRYFPCLHSFEARAGLIVPLP 123 Query: 125 LPNRALGFLSFSRCSAREIPILSDE--LQLKMQLLVRESLMALMRLNDEIVMTPEMNFSK 182 +G ++ + P E + + +LVR + + S Sbjct: 124 DRRGRVGAITMLSAQREDYPEEIAEAGRIVALAVLVRAGSLLPAAAAVSPALAGLAKLSP 183 Query: 183 REKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVA 231 R+ EIL W A GK+++EIA+IL +S V +H + KK++ ++TQ Sbjct: 184 RQIEILDWIAHGKSNSEIALILGLSRRNVTYHVSEILKKLDVTSRTQAV 232 >UniRef50_A4KVQ8 Probable transcription activator TraR n=2 Tax=Rhizobiaceae RepID=A4KVQ8_RHIME Length = 237 Score = 130 bits (326), Expect = 6e-29, Method: Composition-based stats. Identities = 47/227 (20%), Positives = 87/227 (38%), Gaps = 15/227 (6%) Query: 20 METAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAI 79 V +E A + E+ Y+ P F +N W+ + + Sbjct: 20 AHDDATVKAALEGLADRFEFSGYAYTKLLPGEF-----CVISNLHPDWLKRKRKFDLDRR 74 Query: 80 DPVLNPENFSQGHLMWN---DDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFS 136 +PVL S+ +W+ ++L E Q + A +R G+T + + N A+ LSF Sbjct: 75 NPVLRRAQQSRRAFVWSSQEENLSEEDQSFFGCAAKFEIRSGITIPIAISNGAISALSFV 134 Query: 137 RCSAREIPILSDELQL---KMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAE 193 P+L+ + ++ V + + +L + + +E RW + Sbjct: 135 S----PKPVLTAQEEIDPIAASSAVGQLHARIEQLKVAPSIQEPFYLTPKEGTYTRWLSL 190 Query: 194 GKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 GKT + A I + NTV +++ + N TQ+ A GL+ Sbjct: 191 GKTVEDTADIEHVKYNTVRIALAEARRRYDLCNNTQLVALAIRRGLV 237 >UniRef50_A4EXT1 Possible LuxR family protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EXT1_9RHOB Length = 207 Score = 129 bits (324), Expect = 9e-29, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 75/182 (41%), Gaps = 13/182 (7%) Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND--DLFSEAQPLWEAARAHGLRRG 118 + Y +AWV+ Y + F+ DP + GH+ W +L+ E++ ++ A GLR G Sbjct: 37 STYSKAWVARYVERLFIQTDPTVQFGLSRTGHVTWKQLQELYPESKTFFDEAALFGLRHG 96 Query: 119 VTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEM 178 T L + G +S CS +E +L+M L L+ + + Sbjct: 97 NTLSLRID----GQISVLSCSGSPW----NEQELRMADAALRGLAVLLS---KPREGRDF 145 Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 +R K++L G EIA ILSI TV ++ + N Q+ G Sbjct: 146 GLPERVKDVLALMVSGARDQEIAEILSIKIETVRARRQLAFQLTNTRTIAQLISEVIKNG 205 Query: 239 LI 240 LI Sbjct: 206 LI 207 >UniRef50_C6XPJ3 Transcriptional regulator, LuxR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XPJ3_HIRBI Length = 248 Score = 128 bits (323), Expect = 1e-28, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 7/186 (3%) Query: 60 YTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHG 114 + +P+ W +Y + + +DPV W++ + + E A AHG Sbjct: 58 FGEWPKVWARHYADQRYFEVDPVFESLLKGFDAGYWDELVSNLPVSQAGLKVMEDAAAHG 117 Query: 115 LRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVM 174 G ++ + N + +S + P + L V E +M L R + Sbjct: 118 YADGYSRLIPTLNGSYYLVSLYGKTLVRDPNVRILFDLASIKFVHEGVMLLNRRVGTPLK 177 Query: 175 TPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 + + +KR+ E+L+ A G+T + A L +S V H ++K++NA +Q A Sbjct: 178 --DHDLTKRQIEVLQAKANGQTDKQTADRLGVSVKAVEGHLTKIRKQMNARTTSQAIGLA 235 Query: 235 AATGLI 240 GLI Sbjct: 236 RGKGLI 241 >UniRef50_A6UCQ1 Regulatory protein LuxR n=2 Tax=Sinorhizobium RepID=A6UCQ1_SINMW Length = 247 Score = 126 bits (318), Expect = 5e-28, Method: Composition-based stats. Identities = 51/240 (21%), Positives = 84/240 (35%), Gaps = 19/240 (7%) Query: 12 TMLLRFQRM--ETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTR-PKVAFYTNYPEAWV 68 ML T E+ H + + + ++ + R + +N+P V Sbjct: 16 DMLFEIDPASVRTEYELLHLMRRLISRYGFAHFMIARLPMADEQRFSERLMLSNWPAELV 75 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARA-HGLRRGVTQYLMLPN 127 Y A ++ ++ + + L E AR G + Sbjct: 76 QQYDASETFQASLLIERLRQTKLPI-------AGGPELMEPARKGAGKAPAILLPPHADM 128 Query: 128 RALGFLS-------FSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 L F + + + + + L + + L R D E Sbjct: 129 AHFAVLLHTTYGEPFVVVLSGKRDEPAGGERATLYLALVQLFECLERTFDAGSGARE-KL 187 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 S RE E LRW A GK+S EIA+IL IS TV+ + K+ +K++A N+ Q A LI Sbjct: 188 SSREIECLRWAAAGKSSDEIAIILGISAYTVSSYFKSATRKLDAVNRMQAIARAMRMKLI 247 >UniRef50_B0T7Q6 Transcriptional regulator, LuxR family n=1 Tax=Caulobacter sp. K31 RepID=B0T7Q6_CAUSK Length = 249 Score = 126 bits (316), Expect = 8e-28, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 89/245 (36%), Gaps = 18/245 (7%) Query: 12 TMLLRFQRMETAEEVYHE-IELQAQQLEYD---YYSLCVRHPVP-------FTRPKVAFY 60 T L+R + + + + A+ + Y L R P P P+ Sbjct: 5 TALVRTESAACPAQAFRATLGDAARLCGFSQAAYMHLGHRLPRPEDSDAAAMETPRELIS 64 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGLRRG 118 + + + Y+ + +LA DP+ + W+ D A+PL A A G+R G Sbjct: 65 SGGLDE--ALYRKRGYLAFDPLAVRAAKAFLPFAWSLADLADPNARPLARAFEAWGVRSG 122 Query: 119 VTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVM---T 175 + + ++F ++ L + L + L + T Sbjct: 123 LIVPVQDSTAGPALVNFLHAESQSRAALDAGAEAARDGLALLTAARLHAAARASLPVHGT 182 Query: 176 PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 + + RE ++LR A+G T E A L +S V FH K++ NKT A Sbjct: 183 SDAGLNAREMQVLRLAAQGLTEMETAARLKLSRRGVQFHLSRAGAKLDTTNKTAAVARAI 242 Query: 236 ATGLI 240 + GLI Sbjct: 243 SLGLI 247 >UniRef50_Q2RT10 Transcriptional regulator, LuxR family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RT10_RHORT Length = 254 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 79/213 (37%), Gaps = 12/213 (5%) Query: 40 DYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMW---- 95 Y +L H + + +++ +A++ Y L+ D + + W Sbjct: 14 SYGALFSPHYRSDPGRETVYMSHFDQAFLDRYSQAGHLSHDTAVQWVFRFSQPVPWVTPR 73 Query: 96 -NDDLFSEAQPLWEAARAHGLRRGVTQYL-MLPNRALG--FLSFSRCSAREIPILSDELQ 151 +L +WE A G+R G++ + + + G F S + + + + Sbjct: 74 RLAELSERQIRVWEEGEAFGVRNGLSVPVRFGRDGSAGGLFFSATGLGDDDWRGILTDKG 133 Query: 152 LKMQLLVRESLMALMRL----NDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSIS 207 + L A+ R ++ + RE+E L W+A G E+A L ++ Sbjct: 134 ATLVALAYTFHEAMERFPLFSTRVNPQDHVIHLTNRERESLIWSARGCQVGEVADRLGVA 193 Query: 208 ENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + T H ++K+ A Q A A GL+ Sbjct: 194 DRTAEHHLGAARRKLMARTTAQAVARALAMGLL 226 >UniRef50_A3JLR6 Transcriptional regulator, LuxR family protein n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JLR6_9RHOB Length = 203 Score = 124 bits (313), Expect = 2e-27, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 73/181 (40%), Gaps = 10/181 (5%) Query: 60 YTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGV 119 ++P+AWV +Y DP + ++G + W++ + + +A H LR G Sbjct: 33 INSFPQAWVDHYTVMGLAVQDPFMRWVYQNEGTVRWSELDLPDPAGVQQAYIEHNLRYGC 92 Query: 120 TQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMN 179 ++ SF + + + E + L + A ++D+ V Sbjct: 93 LVSVLDALSGAPTRSFGIFARNDREFKTSE----LAKLQQSLRGAKPGIDDKPV------ 142 Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 ++ + E LR + GK EIA L+ISE+ V + I A TQ AA GL Sbjct: 143 LTEAQIEALRLLSNGKRFKEIAHELNISESAVKARLRAAMTNIGAKTATQATSKAARLGL 202 Query: 240 I 240 + Sbjct: 203 L 203 >UniRef50_A0P1W5 Transcriptional regulator, LuxR family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P1W5_9RHOB Length = 233 Score = 124 bits (311), Expect = 3e-27, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 78/231 (33%), Gaps = 15/231 (6%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 + R + ++ +D L VR V V T + + ++ Sbjct: 7 EDFVETISREVAPDALWQSTLAFLADAGFDK-VLRVRAGVSG----VTVRTTLSDGFQTF 61 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWNDD-------LFSEAQPLWEAARAHGLRRGVTQYL 123 Y + DP L S + D L ++ L +A G R G + Sbjct: 62 YWENGYQKDDPFLRHCMTSPVAVATGADYLDRYDYLNERSRRLILSAAEDGFRAGFSVVA 121 Query: 124 MLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKR 183 +P + S R + + ++ + + L+R +L+A+ D + + R Sbjct: 122 PVPEQRRALGWNIGSSLRRAEV--ERIRQEREPLIRLALVAVQNRLDGPEAV-RASLTPR 178 Query: 184 EKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 E E L A G IA L I TV H N +KK+ A + A Sbjct: 179 ELECLSLIASGLRVKAIAAELGIQPVTVELHLGNARKKLGAATREHAVALA 229 >UniRef50_C4RAJ6 Transcriptional Regulator, LuxR family n=1 Tax=magnetite-containing magnetic vibrio RepID=C4RAJ6_9PROT Length = 261 Score = 124 bits (311), Expect = 3e-27, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 91/233 (39%), Gaps = 12/233 (5%) Query: 17 FQRMETAEEVYHEIELQAQQLEYDYYSLCV-RHPVPFTRPKVAFYTNYPEAWVSYYQAKN 75 Q ++ + + + + +D+ R ++ +++NY + W Y+ Sbjct: 30 LQAQSCIDDCWMALLEEVGRHGFDWAMYGFGRRRNDSEELEITYFSNYSKEWQDEYEKLG 89 Query: 76 FLAIDPVLNPENFSQGHLMW-----NDDLFSEAQPLWEAARAHGLRRGVTQYLM-LPN-R 128 D S ++ ++L E + + E A+ G++ G++ L P+ Sbjct: 90 GSQNDIDTLHCISSTEDQIFFSPETRENLTPEQKAIDEFAQRSGIKNGISFPLRAGPDIN 149 Query: 129 ALGFLSFS-RCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEI 187 G L S R E + DE + ++L+ + + + +++EK+ Sbjct: 150 DWGGLGLSTRMDDDEFSAVLDERRDYLRLIAQVFHAV---TQSRPLAKNALLLTEKEKQA 206 Query: 188 LRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L TA+G + +IA L +S+ V+ H K+ + +TQ A ++ Sbjct: 207 LSLTAKGLKTKQIADKLGMSDKAVDQHIARATAKLASTTRTQAVAEAIRLHIL 259 >UniRef50_B0SZK2 Transcriptional regulator, LuxR family n=4 Tax=Alphaproteobacteria RepID=B0SZK2_CAUSK Length = 257 Score = 123 bits (310), Expect = 4e-27, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 86/244 (35%), Gaps = 23/244 (9%) Query: 15 LRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPE-----AWVS 69 +R+ + + + + Y + P + P W+ Sbjct: 6 EEIERLARVAALAERVRDLGRGVGLPYVAASADISSP---EPMLGLDGKPLAETIFEWLD 62 Query: 70 ----YYQAKNFLAIDPVLNPENFSQGHLM--------WNDDLFSEAQPLWEAARAHGLRR 117 Y++ + F P + + W EA + EAA+A G+ Sbjct: 63 ASLYYWRDRAFALRAPFILAARCTAEPFFYHQGRFASWRPLARLEAIEVGEAAKAFGVEA 122 Query: 118 GVTQYLMLPNRALGFLSFSRCSA-REIPILSDELQLKMQLLVRESLMALMRLNDEIVMTP 176 + L +G + ++ ++P L ++ + A D+ V P Sbjct: 123 AIIAPAHLTGGVIGAVVWASAEPLADLPALYAARSDELHGAALRLVSAYRDGCDDDV--P 180 Query: 177 EMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAA 236 + +KRE + L+W A GKT A+IA I+ I+ TV FH +N K+ + Q A Sbjct: 181 PVRLTKREIQCLKWAAAGKTDADIAQIIGIAGPTVRFHVQNAALKLRVAGRAQAVHRATG 240 Query: 237 TGLI 240 G I Sbjct: 241 LGYI 244 >UniRef50_B3RAC5 Putative transcriptional regulator, LuxR family n=1 Tax=Cupriavidus taiwanensis RepID=B3RAC5_CUPTR Length = 333 Score = 123 bits (309), Expect = 5e-27, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 88/242 (36%), Gaps = 17/242 (7%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNY-PEAWVS 69 ++ Q T E ++ + + +D+ V F+ +Y P W Sbjct: 73 PGLVTALQAEPTHEGRSAVMQSAIRAIGFDWLGYATAAHVGGQLQPRTFFESYSPPGWRE 132 Query: 70 YYQAKNFLAIDP-VLNPENFSQGHLMWNDDLFSEA----------QPLWEAARAHGLRRG 118 Y + + IDP P F +W+ D ++ + E R G+R G Sbjct: 133 RYFRERYYEIDPRTPQPGTFC-LPTVWDADDLAQTPLGNVPPLRRRRFLEDLRDAGVRSG 191 Query: 119 VTQYLMLP-NRALGFLSFSRC--SAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT 175 + L +P N +SF S R I L M L + E L + + Sbjct: 192 IFLNLPMPGNNEFVLISFMSGIESRRWIGDSVVGQALAMGLALHEFLTCHVEIPA-FAGR 250 Query: 176 PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 S +++IL A+G + EIA + +S V++H + ++ N+ Q+A A Sbjct: 251 HREGLSDVQRDILACLAQGLSDKEIARRMDMSIFNVDYHMRRLRSHFGVRNRVQLASAAT 310 Query: 236 AT 237 Sbjct: 311 LL 312 >UniRef50_B9J7F2 Transcriptional regulator protein n=10 Tax=Rhizobium/Agrobacterium group RepID=B9J7F2_AGRRK Length = 243 Score = 122 bits (307), Expect = 8e-27, Method: Composition-based stats. Identities = 51/235 (21%), Positives = 87/235 (37%), Gaps = 12/235 (5%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY-TNYPEAWVSYY 71 + T +E + + + + + ++ + Sbjct: 13 LSAELATARTQTAFAQALERTSSAFGFSQVAFLNAPVSEDSMLTPLVIEGSVQPQFLRDF 72 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGLRR----GVTQYLML 125 + L P+L S W+ + S+ L A L G+ + Sbjct: 73 DRQQLLRRCPMLQRVRDSVMPRAWHLLEKNISQDMELPRELHALLLSHNCPMGIVIPINS 132 Query: 126 PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREK 185 + F R S+ +L M +L + ++ ND V+ S RE Sbjct: 133 SDGQRLVFWF--MGNRSSLGQSELNELNMIMLQAHDIYNCIKRNDGSVL---HMLSAREL 187 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E++RWTA+GKTS EI ILS+S++TVN + N KK++ N+TQ+ A LI Sbjct: 188 EVVRWTAQGKTSVEIGQILSLSDHTVNAYMMNAIKKLDCVNRTQLVAKAIRLKLI 242 >UniRef50_A5F0P9 Transcriptional regulator, LuxR family n=25 Tax=Proteobacteria RepID=A5F0P9_VIBC3 Length = 253 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 81/235 (34%), Gaps = 14/235 (5%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYD-YYSLCVRHPVPFTRPKVAFYTNYPEAWV-- 68 T++ + + + V + +A YD + ++ + W Sbjct: 22 TLISQLEESHSFSTVQDIVRQRAHFYGYDKIVFFSAHSTLDGIIERIYWIEG---DWFDD 78 Query: 69 -SYYQAKNFLAIDPVLNPENFSQGHLMWND--DLFSEAQPLWEAARAHGLRRGVTQYLML 125 A ++ P+ + W D+ E + + G+ G+ + Sbjct: 79 GENIDAATYIKYCPITRHIIETDRPFFWTKKPDVNREQYRVVAKPKGSGI-HGLQIPIFG 137 Query: 126 PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREK 185 G +S + S + ++ LL + A RL + SKREK Sbjct: 138 HLGLEGAVSL----GGKAIDSSPRARCELSLLSTYAFFAARRLLESSDPNRSALLSKREK 193 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E+L TA G+ A+IA+ L +S T+ H +N + K+ + A G I Sbjct: 194 EVLSLTALGRRQADIAIALGVSPRTIENHLRNARLKLGGATTAETIRIAIQRGDI 248 >UniRef50_A9E0R1 Transcription regulator, LuxR family, putative n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E0R1_9RHOB Length = 253 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 69/183 (37%), Gaps = 12/183 (6%) Query: 65 EAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLR-------R 117 W S + L PV + W+ S+ L A RA+ R Sbjct: 68 PRWHSRFLDVETLRESPVEAIARQQVLPVYWSA--VSKEARLTRAERAYMDRLLGRYPND 125 Query: 118 GVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPE 177 G++ + P + + + LS K+ + + + L + + Sbjct: 126 GISLKVHGPGGDSAVVGLGFAA--KQARLSSIALYKLLCAAQIAHLRYCALAESQSPR-D 182 Query: 178 MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAAT 237 S RE E+L W A GK++ IA IL IS +TV+ + + K++ ++T A Sbjct: 183 FGLSPREVEVLEWIATGKSNGVIAEILGISPHTVDTIVRRIFAKLDVNDRTTAAIRGLGA 242 Query: 238 GLI 240 GL+ Sbjct: 243 GLL 245 >UniRef50_C6XN41 Transcriptional regulator, LuxR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XN41_HIRBI Length = 249 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 42/243 (17%), Positives = 83/243 (34%), Gaps = 23/243 (9%) Query: 16 RFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPK--VAFYTNYPEAWVSYYQA 73 R Q ++ EE+ I+ + + ++ + F+R + F + + W +Y Sbjct: 12 RLQSAKSQEEITKAIQGFVENKGFWSFNFGYLDTLNFSRADAPLKFISTMSDDWAEHYMN 71 Query: 74 KNFLAIDPVLNPENF-SQGHLMWNDDL-------FSEAQPLWEAARAHGLRRGVTQYLML 125 + + +D + ++ +L S+ + A + G L Sbjct: 72 EKYEEVDFAVRELRKERPTPILVGYELQKKMQVLTSDEEKYLRDAAEANWQNGCVIPLGS 131 Query: 126 ------PNRALGFLSFSRCSA--REIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPE 177 P +G S R + + E+ + M + + ++ L I Sbjct: 132 LPMDNKPPAGIGVASELREKEFLKVWEAGASEILVFMNFMNQVLSQSIADLLYSIEP--- 188 Query: 178 MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAAT 237 + RE++ L + A G I LSI+ TVN H +N + K+ A A Sbjct: 189 --LTDRERDCLAFLARGLRPDRIGDELSIATVTVNMHIRNARYKLKATTNAHAVAKAIRL 246 Query: 238 GLI 240 I Sbjct: 247 NFI 249 >UniRef50_A5V7U1 Regulatory protein, LuxR n=4 Tax=Proteobacteria RepID=A5V7U1_SPHWW Length = 278 Score = 118 bits (295), Expect = 2e-25, Method: Composition-based stats. Identities = 45/174 (25%), Positives = 69/174 (39%), Gaps = 16/174 (9%) Query: 81 PVLNPENFSQGHLMWNDDLFSEAQ------PLWEAARAHG-LRR---GVTQYLMLPNRAL 130 PV W + + + ++ A +G L G+ + LP + Sbjct: 91 PVAEACRVESRPF-WANRDGARDRDGTPILRQFDFAAHYGRLVENPAGIVVPVHLPFSRI 149 Query: 131 GFLSFSRCSAREIPILSDELQLK---MQLLVRESLMALMRLNDEIVMTPE-MNFSKREKE 186 G +SFS C LS EL + LL + RL P+ + ++ E Sbjct: 150 GMVSFS-CRDNRRDDLSRELDEHFETLYLLGHLFIEGYARLETGDRWLPDAVTLTRLEVN 208 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 LRW A GKT EIA I+ + T+ FH +N K+ A N++Q A G + Sbjct: 209 CLRWVARGKTDDEIATIMGRARPTIRFHLQNAAIKLGAANRSQAVFRAGQLGYL 262 >UniRef50_B9JVS5 Transcriptional regulator LuxR family n=3 Tax=Agrobacterium vitis RepID=B9JVS5_AGRVS Length = 246 Score = 117 bits (294), Expect = 3e-25, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 1/126 (0%) Query: 116 RRGVTQYLMLPNRALGFLSFSR-CSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVM 174 R+ V+ L+ + L+ + E + LL + L++ D + Sbjct: 115 RQAVSYPLLSVDGRGAILAIASNACEEEWRRFRRCHDRDIHLLAGKFHAGLVKRCDGTRL 174 Query: 175 TPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 ++RE+E LRWTA GK+ E A+IL ISE TV + N + K++A + TQ A Sbjct: 175 GGVPTLTRREQETLRWTAAGKSYWETAVILGISERTVRYFMANARTKLDAVSNTQAVAKA 234 Query: 235 AATGLI 240 GLI Sbjct: 235 LQRGLI 240 >UniRef50_A3PQ95 Response regulator receiver protein n=4 Tax=Rhodobacter sphaeroides RepID=A3PQ95_RHOS1 Length = 226 Score = 117 bits (293), Expect = 4e-25, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 65/178 (36%), Gaps = 12/178 (6%) Query: 63 YPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQY 122 +P +W+ +Y + F DP++ + G W+ + + A R HGLR G Sbjct: 61 FPSSWIRHYTVQAFGLRDPLIRWAASANGAARWSAVHLPDEAGVLAAYRRHGLRFGCVIG 120 Query: 123 LMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSK 182 L SF + + + + E+ L E+ + Sbjct: 121 LPARTARSRKRSFGLFARNDREMTNHEIATLRATLA------------ELHAPNRDALTP 168 Query: 183 REKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + E+LR +EG EIA L I+E V K ++ A Q A A GL+ Sbjct: 169 SQAEVLRMLSEGVRYKEIAHRLGITEGAVKARFKAACDRLGARTAVQAANIAQRRGLL 226 >UniRef50_Q1GYL3 Transcriptional regulator, LuxR family n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GYL3_METFK Length = 272 Score = 116 bits (292), Expect = 6e-25, Method: Composition-based stats. Identities = 51/172 (29%), Positives = 77/172 (44%), Gaps = 20/172 (11%) Query: 77 LAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFS 136 + IDP L NF + + D + + L A A+GL A G +S Sbjct: 111 VLIDPYLKDGNFGRFTVPKIDQVNLQESELRNIA-AYGLSS-----------ADGSISSF 158 Query: 137 RCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMN--------FSKREKEIL 188 +R L+ ++LLV LMR++D + + + REKEIL Sbjct: 159 FSFSRISGELNASHAYMLELLVPYLHSVLMRVSDGVFNFGDAMGEGVNAGIITPREKEIL 218 Query: 189 RWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +W GK++ EIA IL IS TV H +N+ +K++ N++ A A GLI Sbjct: 219 QWVHTGKSNWEIATILEISPLTVKNHMQNILRKLDVQNRSHAAAKAYRLGLI 270 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 116 bits (291), Expect = 6e-25, Method: Composition-based stats. Identities = 39/132 (29%), Positives = 58/132 (43%), Gaps = 7/132 (5%) Query: 109 AARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRL 168 A LR GV YL+ + R R L+ + LV ++L L Sbjct: 100 DALMEALRAGVAGYLLKDASRREIIGAVRQVLRGEAFLNPD-------LVLQTLRRLAHA 152 Query: 169 NDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKT 228 TP + RE+++LR +GKT+ EIA L IS TV H +++ K+ ++T Sbjct: 153 TPTDDATPIEPLTPREQQVLRLLMQGKTNREIARELIISPGTVKVHVEHIIAKLGVSDRT 212 Query: 229 QVACYAAATGLI 240 Q A A GL+ Sbjct: 213 QAAVRALELGLV 224 >UniRef50_A9GRC0 Response regulator n=2 Tax=Phaeobacter gallaeciensis RepID=A9GRC0_9RHOB Length = 265 Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 90/260 (34%), Gaps = 46/260 (17%) Query: 7 FSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEA 66 W + +R + + ++ + + +DY V R +TN P Sbjct: 1 MDWTD--IDSLERCNSTDALWAQALQIFATMGFDYAIYLT---VEGDRSHPHIHTNLP-- 53 Query: 67 WVSYYQAKNFLAIDPVLNPENFSQGH------LMWNDDLFSEAQPL---WEAARAHGLRR 117 Y+ DP L+ S + +D + EA+ + EA+ G R Sbjct: 54 --QIYEQLP-SHRDPFLDHCCNSYEPQFTGTEFL-SDHPYLEAEEMAFIREASAKTGFRA 109 Query: 118 GVTQYLML-PNRALGFLSFSRCSAREIPILS----DELQLKMQLLVRESLMALMRLNDEI 172 G+ + L + G + +R+ I + + L++ + L + Sbjct: 110 GIAIPVRLQGSDRFGGFNLGTARSRDSFIAHVTGKTDSLRFLCLIIHRRMEELRQTASSP 169 Query: 173 VMTPE---------------------MNFSKREKEILRWTAEGKTSAEIAMILSISENTV 211 P S RE+E+L ++G TS E A + IS +TV Sbjct: 170 AANPYEPDAEGAGFDRPLIAPPPAALTRLSPREREVLYLFSQGLTSKECAAVCKISPHTV 229 Query: 212 NFHQKNMQKKINAPNKTQVA 231 + + ++ +K+N N+ + Sbjct: 230 SEYANSIYRKLNVRNRVEAI 249 >UniRef50_Q1GHC1 Transcriptional regulator, LuxR family n=15 Tax=Rhodobacteraceae RepID=Q1GHC1_SILST Length = 251 Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 94/240 (39%), Gaps = 13/240 (5%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLC---VRHPVPFTRPK-VAFYTNYPEAW 67 L + + +T EE++ Q + +D + P TN+ + Sbjct: 5 EYLQQLTQFKTIEELWRAHVQQMSRYGFDRLLYGYTLFKTRTSLGDPDDFVILTNHCPEY 64 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWN--------DDLFSEAQPLWEAARAHGLRRGV 119 + + A A P+L ++GH W L +A+ + + ++ G+ G Sbjct: 65 LQGFLADGLYAHAPMLTWALENEGHASWRVSQEMAAQGLLDKQARKVQDFNQSMGVHAGY 124 Query: 120 TQYLMLPNRAL-GFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEM 178 T + G +S + + + + +V + +A +++ P+ Sbjct: 125 TISFNSASERFKGAISLAARADLDQDGIDQIWAEHGADIVLMNNVAHLKILTLPYHAPKR 184 Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 +KR++E+L+W +GKT+ +IA+++ ++ T+ H + + ++ Q AA Sbjct: 185 GLTKRQREVLQWVGDGKTTQDIALLMGLTPATIEKHLRLARATLSVETTAQAVLKAALHN 244 >UniRef50_Q8ZSI8 Transcriptional regulator n=7 Tax=Cyanobacteria RepID=Q8ZSI8_ANASP Length = 240 Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 100/233 (42%), Gaps = 16/233 (6%) Query: 11 RTMLLRFQRMETAEEV-YHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVS 69 T++ + + ++ H ++ + ++ + + H + + P++++ Sbjct: 6 PTLIQKVTNASSVNQLCGHYMDAAGELFGSQHWGIYI-HDWAGQQGTIHL-QGLPDSFID 63 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRG--------VTQ 121 YY A+D V+ +F+EA W+ + + + G +T Sbjct: 64 YYSKVG-AALDKVMEYVVCHHAPAH-EQIIFTEA--TWKQSELYQIGCGKIYDHEHIMTG 119 Query: 122 YLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEI-VMTPEMNF 180 ++ R +G + F+R S D LQL + +AL+R E+ V PE++ Sbjct: 120 PIVGEGRLIGTVQFARTSGNPAYNTQDLLQLSAICAHLSAKLALLRSQHELFVPKPEISL 179 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 + RE ++ A+G T+AEIA L IS+NTV K + +K++ + ++ Sbjct: 180 TPRELQMAALVAKGLTNAEIAAELWISQNTVKQTLKRIFRKLDVSARAEMVAR 232 >UniRef50_A9F751 Possible LuxR family protein n=1 Tax=Phaeobacter gallaeciensis 2.10 RepID=A9F751_9RHOB Length = 205 Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 73/201 (36%), Gaps = 18/201 (8%) Query: 42 YSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDL-- 99 +SL V V + Y W+ +Y + + +DP ++ + G W D Sbjct: 21 FSLGVGFDGA---EPVFMKSTYSREWIDHYLVQRYFDLDPTIHFGKSATGFTTWGDLRRH 77 Query: 100 FSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVR 159 + + ++ A GL G T + + G +S CS + + + ++ Sbjct: 78 YPTSNKFFDDAARFGLDCGNTLSIHVD----GQVSILSCSGPKW----GDTERRLAKAAL 129 Query: 160 ESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQ 219 S+ A+ E + K+++R G EIA L + TV ++ Sbjct: 130 YSIHAVHHRESCRYTIKEKS-----KDVIRLMCTGYQDREIAERLGVKLETVRQRRQTAM 184 Query: 220 KKINAPNKTQVACYAAATGLI 240 + + A + Q+ GLI Sbjct: 185 QAVEATSTAQLISLVIKYGLI 205 >UniRef50_C3JU17 Two-component system response regulator n=2 Tax=Rhodococcus erythropolis RepID=C3JU17_RHOER Length = 239 Score = 114 bits (287), Expect = 2e-24, Method: Composition-based stats. Identities = 51/217 (23%), Positives = 86/217 (39%), Gaps = 21/217 (9%) Query: 31 ELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQA-----KNFLAIDPVLNP 85 EL+A+ L Y ++ R P R + + Y + + +N I + Sbjct: 35 ELRARGLAYSAAAVTYRDPSTG-RHRALASSGYDARVLEFLLEDFVADRNLFGI---IRE 90 Query: 86 ENFSQGHLMWND-DLFSEAQPLWEAARAHGLRRGVTQYLMLPNRAL-GFLSFSRCSAREI 143 S + W D F + + + + R G G + L R + G L S + + Sbjct: 91 A--SGVPVFWQDVPRFEQVEMVTDVLRPSGYAEGASVALGFSGREVTGLLHMSFADSGVV 148 Query: 144 PILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMI 203 + + +V S A R+ + V ++ S RE ++L+ A G + EIA Sbjct: 149 DRVRE--------VVAASSAACSRVVGDQVALDRVHLSPREIQVLQLVARGAGNVEIAEE 200 Query: 204 LSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L +S TV H +N+ K ++ Q A AA GLI Sbjct: 201 LFVSRRTVATHLENIFVKTGTNSRVQAAVRAAKWGLI 237 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats. Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 3/131 (2%) Query: 113 HGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMAL---MRLN 169 H L+ G YL+ A + R A L ++ + R + Sbjct: 127 HALQTGAMGYLLKEMDADALIEAVRVVAEGGSYLHPKVTHNLVKEYRRLVAGEGGGKEKQ 186 Query: 170 DEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQ 229 ++ V P ++RE E+L+ A+GK++ IA L ISE TV H N+ +K+N ++TQ Sbjct: 187 NQDVCRPYHLLTRRECEVLQLLADGKSNKGIADALYISEKTVKNHVSNILQKLNVNDRTQ 246 Query: 230 VACYAAATGLI 240 A G + Sbjct: 247 AVVVAIKNGWV 257 >UniRef50_A9D9Y9 Putative transcriptional regulator protein, LuxR family n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D9Y9_9RHIZ Length = 208 Score = 113 bits (283), Expect = 5e-24, Method: Composition-based stats. Identities = 46/219 (21%), Positives = 88/219 (40%), Gaps = 16/219 (7%) Query: 25 EVYHEIELQAQQLEYDYYSLCV--RHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPV 82 + + + A + +++ L P + N +A++ +A + DP+ Sbjct: 2 DFFRLFKALAAVHDSEHFVLVELSTDDKPLDLNRGHSLHNVSDAFLDA-EAVSAKRDDPL 60 Query: 83 LNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSARE 142 + S ++ G + V L L R R Sbjct: 61 VACLLTSTAPKSFDATTTKTP-----LIARCGSKSAVVVPLHTAVGKRFGLILLRNRERP 115 Query: 143 IPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEM-NFSKREKEILRWTAEGKTSAEIA 201 L ++ L+ ++ + R + ++ + S+RE +I+ WT+EGKTS+EIA Sbjct: 116 -------LHSEVALIAYDASIVFQRYFEVVLSLDSISGLSEREIQIVSWTSEGKTSSEIA 168 Query: 202 MILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +IL +SE+TVN + + +K+ N+ Q+ A GLI Sbjct: 169 IILGLSEHTVNSYIAAILRKLQVVNRAQMVASALRNGLI 207 >UniRef50_A8LK93 Putative regulatory protein n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LK93_DINSH Length = 260 Score = 113 bits (282), Expect = 6e-24, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 79/234 (33%), Gaps = 14/234 (5%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSLC-VRHPVPFT---RPKVAFYTNYPEAWVS 69 L ++ EE + + + +D R P T R ++ P+ +V Sbjct: 14 LSEITATQSIEEAWALHCTRMAEYGFDRLFYGHTRFSTPSTYADRHDALILSSLPQGYVE 73 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWN--------DDLFSEAQPLWEAARAHGLRRGVTQ 121 Y + P++ + G W+ D++ + +A G+ G + Sbjct: 74 RYLREGHYRNIPMIRWAEKNDGACSWSEVYARLHPDEMTPGTRKALGTRQAFGIENGYSI 133 Query: 122 YLM-LPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 L +S L D++ + + + + Sbjct: 134 SFRNLCQGGFAAISLVGREGLSQADL-DKIWASRGAEIELANRVFHLVVSSLPSRRPNRL 192 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 + R++E+L W A GKT EI +++ + TV H + ++ +NA Q A Sbjct: 193 TPRQREVLEWVAHGKTVPEICLLIGRKQATVEKHLRLAREAMNAQTTAQAVLRA 246 >UniRef50_A4XEP8 Regulatory protein, LuxR n=2 Tax=Sphingomonadaceae RepID=A4XEP8_NOVAD Length = 255 Score = 111 bits (278), Expect = 2e-23, Method: Composition-based stats. Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 3/128 (2%) Query: 116 RRGVTQYLMLPNRALGFLSF--SRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEI- 172 R + + LP +G +SF E+ + E + R + + + + Sbjct: 124 RAAIVVPVHLPFGQIGAVSFNPLDPDLTELDDIFLENGDAFGIYGRTFIASYVHAMGSVQ 183 Query: 173 VMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVAC 232 + P SKRE E LRW A GKT EI+MI+ S TV FH N K+NA N++Q Sbjct: 184 ALPPGSRLSKREVECLRWAAIGKTDLEISMIMGRSRATVRFHIHNASMKLNAVNRSQTVF 243 Query: 233 YAAATGLI 240 AA G I Sbjct: 244 KAAQLGYI 251 >UniRef50_A9HYE4 Transcriptional regulator, LuxR-family n=2 Tax=Proteobacteria RepID=A9HYE4_BORPD Length = 71 Score = 111 bits (278), Expect = 2e-23, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 37/65 (56%) Query: 176 PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 P S RE E L W+A GKTS EIA+IL +SE TVNFH N K+ N+ A Sbjct: 2 PAKPLSNREHECLHWSAMGKTSWEIAVILGVSERTVNFHIGNACSKLGVYNRRAAVAIAL 61 Query: 236 ATGLI 240 + GL+ Sbjct: 62 SQGLL 66 >UniRef50_C6B0L0 Transcriptional regulator, LuxR family n=10 Tax=Rhizobium RepID=C6B0L0_RHILS Length = 234 Score = 111 bits (277), Expect = 3e-23, Method: Composition-based stats. Identities = 63/242 (26%), Positives = 98/242 (40%), Gaps = 39/242 (16%) Query: 16 RFQRMETAEEVYHEIELQAQQLEYDYYSLCVRH--PVPFTRPKVAFYTNYPEAWVSYYQA 73 R + + ++ AQ +D ++L PF V TN E V + Sbjct: 14 ELSRAINRTDFFRLLKSAAQHYNFDNFALARISEASAPFGERDV-VITNVAERRVGLFIT 72 Query: 74 -------------KNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120 FLA PV +Q + +D +F+E Sbjct: 73 TLKEALGTVRAKTAQFLAT-PV--HGRSAQPEVYPSDLVFNE---FLSGVFLF------- 119 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMN- 179 L P L S R+ P S+ + + M + E ++TPEM+ Sbjct: 120 IPLFTPEGRRYCLVLS--GERQEPDQSEIADILLDA------MRIFDKLYEEILTPEMSG 171 Query: 180 -FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 ++RE EI++WT+EGKTSAEIA+IL +SE+TVN H +K++A N+ + A G Sbjct: 172 RLTQRESEIVKWTSEGKTSAEIAIILGLSEHTVNSHITAAARKLDAVNRVHMVAIALRNG 231 Query: 239 LI 240 L+ Sbjct: 232 LV 233 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 111 bits (277), Expect = 3e-23, Method: Composition-based stats. Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 9/139 (6%) Query: 101 SEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRE 160 SE + + A ++ G + Y++ + R P++ L M+++ Sbjct: 92 SETEEMLFEA----VKSGASGYVLKSVSPERLIECVRQVYEGEPVVPS--SLAMKMIAEF 145 Query: 161 SLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQK 220 S A R+ +T ++RE+E+L++ + G ++ EIA L ISENTV H +++ Sbjct: 146 SRTAETRMPSSESVT---ELTEREREVLQYLSAGASNKEIARALFISENTVRNHVRHILD 202 Query: 221 KINAPNKTQVACYAAATGL 239 K++ N+ Q A YA G+ Sbjct: 203 KLHLSNRAQAAAYAVRNGI 221 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P07026 Regulatory protein sdiA n=104 Tax=Enterobacteria... 271 2e-71 UniRef50_UPI00016A4E80 probable transcriptional activator of quo... 250 2e-65 UniRef50_B5EJV5 Transcriptional regulator, LuxR family n=4 Tax=A... 248 1e-64 UniRef50_B2I0W2 DNA-binding HTH domain-containing protein n=9 Ta... 247 3e-64 UniRef50_C5D054 Transcriptional regulator, LuxR family n=1 Tax=V... 242 6e-63 UniRef50_Q2Y6B5 Transcriptional regulator, LuxR family n=1 Tax=N... 241 1e-62 UniRef50_A0MSL2 Transcriptional regulator n=8 Tax=Burkholderia c... 240 4e-62 UniRef50_P54292 Regulatory protein rhlR n=12 Tax=Bacteria RepID=... 238 1e-61 UniRef50_A4BB65 LuxR, transcriptional regulator n=1 Tax=Reinekea... 237 2e-61 UniRef50_UPI00016A49A6 transcriptional regulator, LuxR family pr... 237 2e-61 UniRef50_C8QEN4 Transcriptional regulator, LuxR family n=1 Tax=P... 237 3e-61 UniRef50_B7VAX6 Quorum-sensing control repressor n=7 Tax=Pseudom... 233 4e-60 UniRef50_B1Z3D8 Transcriptional regulator, LuxR family n=4 Tax=B... 230 2e-59 UniRef50_D0KZC8 Transcriptional regulator, LuxR family n=1 Tax=H... 230 3e-59 UniRef50_Q2SXK0 Autoinducer-binding transcriptional regulator, L... 230 4e-59 UniRef50_A4U2E2 Regulatory protein, LuxR:Autoinducer-binding n=1... 229 6e-59 UniRef50_D0B4P5 Transcriptional activator n=39 Tax=Brucellaceae ... 228 2e-58 UniRef50_P74946 Transcriptional activator protein vanR n=3 Tax=V... 227 2e-58 UniRef50_P58590 Transcriptional activator protein solR n=8 Tax=B... 227 3e-58 UniRef50_A9JPW9 PmrR protein n=1 Tax=Pseudomonas sp. RW10S2 RepI... 227 4e-58 UniRef50_A4JSV0 Transcriptional regulator, LuxR family n=2 Tax=B... 226 5e-58 UniRef50_Q9AH79 MupR n=2 Tax=Pseudomonas fluorescens RepID=Q9AH7... 226 5e-58 UniRef50_Q51786 Transcriptional activator protein phzR n=6 Tax=P... 225 1e-57 UniRef50_A1KWS2 Quorum sensing LuxR family sensor regulator n=3 ... 225 1e-57 UniRef50_D2TD82 DNA-binding transcriptional activator SdiA n=2 T... 225 1e-57 UniRef50_C4I3H7 Autoinducer-binding transcriptional regulator, L... 224 2e-57 UniRef50_B2JQL2 Transcriptional regulator, LuxR family n=5 Tax=B... 224 2e-57 UniRef50_Q0B318 Transcriptional regulator, LuxR family n=3 Tax=B... 223 4e-57 UniRef50_Q5EM19 ExpR n=2 Tax=Erwinia RepID=Q5EM19_ERWAM 222 1e-56 UniRef50_Q88E21 Transcriptional regulator, LuxR family n=7 Tax=P... 222 1e-56 UniRef50_A0KHA7 Transcriptional activator protein AhyR/asaR n=2 ... 221 2e-56 UniRef50_Q21EX4 Transcriptional regulator, LuxR family n=1 Tax=S... 221 2e-56 UniRef50_Q13KP8 Transcriptional regulator, LuxR family n=3 Tax=B... 220 3e-56 UniRef50_B6R6S8 Transcriptional regulator, LuxR family n=1 Tax=P... 218 9e-56 UniRef50_C5B507 LuxR type transcriptional regulator n=1 Tax=Meth... 217 3e-55 UniRef50_Q9ANB1 ID375 n=2 Tax=Bradyrhizobium japonicum RepID=Q9A... 215 1e-54 UniRef50_P25084 Transcriptional activator protein lasR n=10 Tax=... 214 2e-54 UniRef50_Q2RNV6 Transcriptional regulator, LuxR family n=1 Tax=R... 213 3e-54 UniRef50_C5ANM9 DNA-binding HTH domain-containing protein n=1 Ta... 213 4e-54 UniRef50_P0A3J5 Transcriptional activator protein ahyR/asaR n=89... 213 6e-54 UniRef50_C3K2E5 Putative LuxR-family regulatory protein n=1 Tax=... 212 6e-54 UniRef50_P55629 Putative HTH-type transcriptional regulator y4qH... 211 1e-53 UniRef50_B1M2Q8 Transcriptional regulator, LuxR family n=1 Tax=M... 210 3e-53 UniRef50_B2UGC8 Transcriptional regulator, LuxR family n=1 Tax=R... 210 4e-53 UniRef50_B1Z7Q1 Transcriptional regulator, LuxR family n=3 Tax=M... 210 4e-53 UniRef50_B3Q959 Transcriptional regulator, LuxR family n=7 Tax=B... 209 5e-53 UniRef50_Q15YZ8 Transcriptional regulator, LuxR family n=1 Tax=P... 209 6e-53 UniRef50_B1VJE7 VR protein n=2 Tax=Pseudomonas fuscovaginae RepI... 209 7e-53 UniRef50_A0AX00 Transcriptional regulator, LuxR family n=6 Tax=B... 209 7e-53 UniRef50_B9K1Q2 DNA-binding HTH domain-containing protein n=1 Ta... 208 9e-53 UniRef50_Q3SUZ7 Transcriptional regulatory protein, LuxR family ... 208 9e-53 UniRef50_B7T9X0 LuxR family transcriptional regulator n=2 Tax=Ba... 208 1e-52 UniRef50_Q3Y8H6 PpuR n=3 Tax=Pseudomonas putida RepID=Q3Y8H6_PSEPU 208 1e-52 UniRef50_Q2T3H4 Autoinducer-binding transcriptional regulator, L... 207 2e-52 UniRef50_B0ZTC2 Transcriptional regulator n=4 Tax=Mesorhizobium ... 207 2e-52 UniRef50_C5V7F6 Transcriptional regulator, LuxR family n=1 Tax=G... 207 4e-52 UniRef50_Q07P69 Transcriptional regulator, LuxR family n=2 Tax=B... 206 5e-52 UniRef50_Q2T747 Transcriptional regulator, LuxR family n=26 Tax=... 206 6e-52 UniRef50_B0U8W7 Transcriptional regulator, LuxR family n=4 Tax=M... 206 6e-52 UniRef50_B8I9S3 Transcriptional regulator, LuxR family n=1 Tax=M... 205 1e-51 UniRef50_B5A461 Quorum sensing regulator n=1 Tax=Mesorhizobium t... 204 2e-51 UniRef50_A1TTR7 Transcriptional regulator, LuxR family n=3 Tax=A... 204 2e-51 UniRef50_Q0B5I4 Transcriptional regulator, LuxR family n=1 Tax=B... 203 3e-51 UniRef50_Q98A91 Transcriptional regulator n=4 Tax=Mesorhizobium ... 203 4e-51 UniRef50_D2LFU9 Transcriptional regulator, LuxR family n=1 Tax=R... 203 5e-51 UniRef50_B1M9X4 Transcriptional regulator, LuxR family n=2 Tax=M... 203 6e-51 UniRef50_A3JLR7 Transcriptional regulator, LuxR family protein n... 199 6e-50 UniRef50_Q6LB43 Probable TraR n=1 Tax=Oligotropha carboxidovoran... 199 7e-50 UniRef50_D0LSA4 Transcriptional regulator, LuxR family n=1 Tax=H... 199 8e-50 UniRef50_A6CUQ5 LuxR, transcriptional regulator n=1 Tax=Vibrio s... 198 1e-49 UniRef50_A4WT88 Autoinducer-binding domain protein n=8 Tax=Rhodo... 198 1e-49 UniRef50_A7KC31 Transcriptional activator protein n=1 Tax=Pseudo... 198 2e-49 UniRef50_P35327 Transcriptional activator protein luxR n=26 Tax=... 197 2e-49 UniRef50_B9JYA3 Transcriptional regulator protein n=1 Tax=Agroba... 197 3e-49 UniRef50_A0ZSG9 LuxR n=1 Tax=Shewanella hanedai RepID=A0ZSG9_SHEHA 196 6e-49 UniRef50_A3T328 Autoinducer-binding transcriptional regulator Lu... 196 7e-49 UniRef50_A9HQR0 Putative transcriptional regulator, luxR family ... 195 8e-49 UniRef50_C7D7H9 Autoinducer-binding transcriptional regulator Lu... 195 8e-49 UniRef50_A9DRS2 Transcriptional regulator, LuxR family protein n... 195 1e-48 UniRef50_B7T9X4 LuxR family transcriptional regulator n=1 Tax=un... 195 1e-48 UniRef50_Q1GQ40 Transcriptional regulator, LuxR family n=1 Tax=S... 195 1e-48 UniRef50_A4U2G3 Transcriptional activator protein n=1 Tax=Magnet... 195 2e-48 UniRef50_A5EUQ4 Transcriptional regulator, LuxR family n=1 Tax=B... 193 3e-48 UniRef50_Q8KW81 RC109 n=1 Tax=Ruegeria sp. PR1b RepID=Q8KW81_9RHOB 193 4e-48 UniRef50_A5EJ34 Putative transcriptional activator n=1 Tax=Brady... 193 6e-48 UniRef50_C4L8Q9 Transcriptional regulator, LuxR family n=1 Tax=T... 192 7e-48 UniRef50_Q21BG2 Transcriptional regulator, LuxR family n=1 Tax=R... 192 7e-48 UniRef50_C8SVZ2 Transcriptional regulator, LuxR family n=2 Tax=M... 192 8e-48 UniRef50_Q13HW9 Transcriptional regulator, LuxR family n=3 Tax=B... 191 2e-47 UniRef50_Q4ZNM6 Regulatory protein, LuxR n=9 Tax=Gammaproteobact... 191 2e-47 UniRef50_Q169S8 Transcriptional activator protein RaiR, putative... 191 2e-47 UniRef50_B1K7Y6 Transcriptional regulator, LuxR family n=3 Tax=B... 191 2e-47 UniRef50_A4JQY4 Response regulator receiver protein n=1 Tax=Burk... 191 2e-47 UniRef50_B5J2H2 Autoinducer binding domain protein n=6 Tax=Rhodo... 190 5e-47 UniRef50_Q03316 Regulatory protein rhiR n=2 Tax=Rhizobium legumi... 190 5e-47 UniRef50_B9TKR4 Transcriptional activator protein ahyR/asaR, put... 189 7e-47 UniRef50_C6B001 Transcriptional regulator, LuxR family n=13 Tax=... 188 1e-46 UniRef50_A8LML6 Putative transcriptional regulator n=1 Tax=Dinor... 188 1e-46 UniRef50_Q39VH7 Transcriptional regulator, LuxR family n=1 Tax=G... 188 2e-46 UniRef50_B0M190 AHL-dependent transcriptional regulator n=2 Tax=... 187 2e-46 UniRef50_A6ULF7 Response regulator receiver protein n=1 Tax=Sino... 187 3e-46 UniRef50_C9NVD6 Transcriptional activator protein luxR n=1 Tax=V... 187 3e-46 UniRef50_C3KBP0 Putative LuxR-family regulatory protein n=2 Tax=... 187 4e-46 UniRef50_Q6B346 Acylhomoserine lactone dependent transcriptional... 186 6e-46 UniRef50_Q4ZW02 Regulatory protein, LuxR:Autoinducer-binding n=9... 186 7e-46 UniRef50_B9K3B4 Two-component transcriptional regulator LuxR fam... 186 7e-46 UniRef50_A5ELZ2 Transcriptional regulator, LuxR family n=1 Tax=B... 185 1e-45 UniRef50_C8SKW4 Transcriptional regulator, LuxR family n=1 Tax=M... 185 1e-45 UniRef50_Q1QF64 Transcriptional regulator, LuxR family n=1 Tax=N... 185 1e-45 UniRef50_C5SPH1 Transcriptional regulator, LuxR family n=1 Tax=A... 185 1e-45 UniRef50_Q216C2 Transcriptional regulator, LuxR family n=2 Tax=R... 185 2e-45 UniRef50_Q89V15 Transcriptional regulatory protein n=1 Tax=Brady... 184 3e-45 UniRef50_Q46967 Transcriptional activator protein echR n=100 Tax... 184 3e-45 UniRef50_A3UFL6 Transcriptional regulatory protein, LuxR family ... 183 5e-45 UniRef50_Q2K2Q3 Autoinducer transcriptional regulator protein n=... 183 5e-45 UniRef50_Q11IH2 Transcriptional regulator, LuxR family n=1 Tax=C... 182 6e-45 UniRef50_A5V2N0 Transcriptional regulator, LuxR family n=1 Tax=S... 182 9e-45 UniRef50_Q9L6U7 Acylhomoserine lactone dependent transcriptional... 181 2e-44 UniRef50_D2M390 Transcriptional regulator, LuxR family n=1 Tax=R... 181 2e-44 UniRef50_B2IHP8 Transcriptional regulator, LuxR family n=2 Tax=B... 181 2e-44 UniRef50_A7IQ01 Autoinducer-binding domain protein n=1 Tax=Xanth... 181 2e-44 UniRef50_Q216V3 Transcriptional regulator, LuxR family n=1 Tax=R... 180 3e-44 UniRef50_Q7CWE0 Transcriptional regulator, LuxR family n=1 Tax=A... 180 5e-44 UniRef50_Q1QFH8 Transcriptional regulator, LuxR family n=3 Tax=B... 179 6e-44 UniRef50_C8SNG6 Transcriptional regulator, LuxR family n=1 Tax=M... 179 6e-44 UniRef50_A6UE86 Regulatory protein LuxR n=4 Tax=Rhizobiales RepI... 179 7e-44 UniRef50_A9D313 Putative AHL-dependent transcriptional regulator... 179 9e-44 UniRef50_B6R4Z6 Transcriptional regulator, LuxR family protein n... 178 1e-43 UniRef50_B3PCB5 Putative two-component transcriptional regulator... 178 1e-43 UniRef50_Q2NS60 Transcriptional activator n=1 Tax=Sodalis glossi... 178 1e-43 UniRef50_Q1GMP0 Transcriptional regulator, LuxR family n=2 Tax=R... 178 1e-43 UniRef50_D2U307 Quorum-sensing transcriptional activator n=1 Tax... 178 2e-43 UniRef50_Q2NWB5 Transcriptional activator protein n=1 Tax=Sodali... 178 2e-43 UniRef50_Q1GPX8 Transcriptional regulator, LuxR family n=1 Tax=S... 177 2e-43 UniRef50_Q28T92 Transcriptional regulator, LuxR family n=1 Tax=J... 177 2e-43 UniRef50_C6B8S2 Transcriptional regulator, LuxR family n=1 Tax=R... 176 4e-43 UniRef50_A9D281 Probable transcriptional regulator protein, LuxR... 176 6e-43 UniRef50_P54293 Transcriptional activator protein esaR n=7 Tax=E... 175 1e-42 UniRef50_C5B5L7 Putative uncharacterized protein n=1 Tax=Methylo... 174 2e-42 UniRef50_Q3K6H8 LuxR family regulatory protein n=1 Tax=Pseudomon... 174 2e-42 UniRef50_A6U6L8 Regulatory protein LuxR n=3 Tax=Rhizobiaceae Rep... 174 2e-42 UniRef50_A3SQM2 Autoinducer-binding transcriptional regulator Lu... 174 3e-42 UniRef50_A2SMG0 Putative LuxR-family transcriptional regulator n... 174 3e-42 UniRef50_Q46751 Transcriptional activator protein carR n=4 Tax=E... 173 3e-42 UniRef50_A5G659 Transcriptional regulator, LuxR family n=1 Tax=G... 173 3e-42 UniRef50_Q9F5D3 Riorf119 protein n=2 Tax=Agrobacterium rhizogene... 173 4e-42 UniRef50_P55407 Probable transcriptional activator protein traR ... 173 4e-42 UniRef50_Q7NQP7 Transcriptional activator, LuxR/UhpA family of r... 173 4e-42 UniRef50_Q19U14 Transcriptional activator AlpR n=1 Tax=Azospiril... 173 4e-42 UniRef50_Q161C2 Transcription regulator, LuxR family, putative n... 173 5e-42 UniRef50_Q1NCQ8 Putative uncharacterized protein n=1 Tax=Sphingo... 173 6e-42 UniRef50_A8GCU6 Transcriptional regulator, LuxR family n=2 Tax=S... 173 6e-42 UniRef50_A9D0L4 Putative LuxR/GerE family transcriptional regula... 172 7e-42 UniRef50_C5AK35 Autoinducer-binding domain protein n=2 Tax=Burkh... 172 1e-41 UniRef50_B8IHS1 Transcriptional regulator, LuxR family n=1 Tax=M... 171 1e-41 UniRef50_UPI00018738D8 transcriptional activator of quorum sensi... 171 1e-41 UniRef50_B2VEE0 Transcriptional activator protein n=1 Tax=Erwini... 171 2e-41 UniRef50_C5ADX8 Acylhomoserine lactone dependent transcriptional... 171 2e-41 UniRef50_Q11FX6 Transcriptional regulator, LuxR family n=1 Tax=C... 171 2e-41 UniRef50_A3SSF6 Transcriptional regulator, LuxR family protein n... 171 2e-41 UniRef50_Q1NBZ0 Transcriptional regulator, LuxR family protein n... 170 3e-41 UniRef50_C5B5L8 Putative uncharacterized protein n=1 Tax=Methylo... 170 5e-41 UniRef50_C6B9S9 Transcriptional regulator, LuxR family n=11 Tax=... 169 6e-41 UniRef50_B2SK12 Transcriptional regulator AhyR/AsaR family n=15 ... 169 7e-41 UniRef50_B4RHX3 Transcriptional regulator, LuxR family n=1 Tax=P... 169 7e-41 UniRef50_A9CI30 Transcriptional regulator, LuxR family n=1 Tax=A... 168 1e-40 UniRef50_B9JSF3 Transcriptional regulator LuxR family n=5 Tax=Rh... 168 2e-40 UniRef50_D0DE55 Regulatory protein, LuxR n=1 Tax=Citreicella sp.... 168 2e-40 UniRef50_A5P6H4 Transcriptional regulator, LuxR family protein n... 168 2e-40 UniRef50_C4RYA9 Transcription regulator SdiA n=1 Tax=Yersinia be... 167 3e-40 UniRef50_A9DE85 Probable transcriptional regulator protein, LuxR... 167 3e-40 UniRef50_Q6FD15 Putative transcriptional regulator, luxR family ... 166 5e-40 UniRef50_B2IL02 Transcriptional regulator, LuxR family n=1 Tax=B... 166 5e-40 UniRef50_A6F7D7 Transcriptional regulator, LuxR family n=1 Tax=M... 166 7e-40 UniRef50_B9LZZ1 Transcriptional regulator, LuxR family n=1 Tax=G... 165 1e-39 UniRef50_A6U9S1 Regulatory protein LuxR n=3 Tax=Rhizobiaceae Rep... 165 1e-39 UniRef50_B2IKZ9 Transcriptional regulator, LuxR family n=1 Tax=B... 164 2e-39 UniRef50_D2TJP9 Quorum sensing transcriptional regulator CroR n=... 164 2e-39 UniRef50_A5VH61 Regulatory protein, LuxR n=2 Tax=Sphingomonas Re... 164 3e-39 UniRef50_B9JA22 Transcriptional regulator protein n=10 Tax=Rhizo... 164 3e-39 UniRef50_B9JII6 Transcriptional regulator protein n=1 Tax=Agroba... 164 3e-39 UniRef50_C6P1V2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Si... 163 4e-39 UniRef50_B6VM55 Similar to probable transcription regulator SdiA... 163 5e-39 UniRef50_B5ZUI2 Transcriptional regulator, LuxR family n=8 Tax=R... 162 7e-39 UniRef50_C4XN36 LuxR family transcriptional regulator n=1 Tax=De... 162 9e-39 UniRef50_P54294 Transcriptional activator protein traR n=14 Tax=... 162 1e-38 UniRef50_B1KKQ1 Transcriptional regulator, LuxR family n=1 Tax=S... 162 1e-38 UniRef50_A6U6L7 Regulatory protein LuxR n=3 Tax=Rhizobiaceae Rep... 161 2e-38 UniRef50_A5VEI3 Regulatory protein, LuxR n=1 Tax=Sphingomonas wi... 160 3e-38 UniRef50_Q2RSB6 Transcriptional regulator, LuxR family n=1 Tax=R... 158 2e-37 UniRef50_B3VN68 PanR n=1 Tax=Pantoea sp. CWB304 RepID=B3VN68_9ENTR 158 2e-37 UniRef50_Q2T4M4 Autoinducer-binding transcriptional regulator, L... 158 2e-37 UniRef50_O54452 Transcriptional activator protein raiR n=9 Tax=R... 157 3e-37 UniRef50_A8LML2 Putative transcriptional regulator n=1 Tax=Dinor... 157 3e-37 UniRef50_A5P6U9 Transcriptional regulator, LuxR family protein n... 157 3e-37 UniRef50_A3WCG7 Two-component transcriptional regulator, LuxR fa... 156 5e-37 UniRef50_C4K6Q5 Autoinducer response regulator n=2 Tax=Enterobac... 155 1e-36 UniRef50_B7UX52 Probable transcriptional regulator n=5 Tax=Pseud... 155 1e-36 UniRef50_D1RJW3 LuxR family transcriptional regulator n=1 Tax=Le... 155 2e-36 UniRef50_Q2YJ50 HTH-type quorum sensing-dependent transcriptiona... 154 2e-36 UniRef50_A4KVQ8 Probable transcription activator TraR n=2 Tax=Rh... 154 2e-36 UniRef50_C4RAJ6 Transcriptional Regulator, LuxR family n=1 Tax=m... 153 4e-36 UniRef50_Q28MF2 Transcriptional regulator, LuxR family n=1 Tax=J... 153 5e-36 UniRef50_A5PE73 Transcriptional regulator, LuxR family protein n... 152 8e-36 UniRef50_B9JZN6 Transcriptional regulator LuxR family n=1 Tax=Ag... 151 2e-35 UniRef50_B3DZX3 Transcriptional regulator LuxR family n=1 Tax=Me... 150 5e-35 UniRef50_D0X6W6 Putative uncharacterized protein n=1 Tax=Vibrio ... 149 8e-35 UniRef50_A3JSN6 Autoinducer-binding transcriptional regulator, L... 149 9e-35 UniRef50_A8LK93 Putative regulatory protein n=1 Tax=Dinoroseobac... 148 1e-34 UniRef50_Q2RT10 Transcriptional regulator, LuxR family n=1 Tax=R... 147 3e-34 UniRef50_Q1GHC1 Transcriptional regulator, LuxR family n=15 Tax=... 147 4e-34 UniRef50_C6XN41 Transcriptional regulator, LuxR family n=1 Tax=H... 146 5e-34 UniRef50_B9J7F2 Transcriptional regulator protein n=10 Tax=Rhizo... 146 6e-34 UniRef50_A4ELE0 Transcriptional regulator, LuxR family protein n... 145 9e-34 UniRef50_B4SS41 Transcriptional regulator, LuxR family n=3 Tax=S... 145 1e-33 UniRef50_A5F0P9 Transcriptional regulator, LuxR family n=25 Tax=... 145 1e-33 UniRef50_Q1YE62 Possible transcriptional regulator, lysR family ... 145 1e-33 UniRef50_D1SY03 Transcriptional regulator, LuxR family n=1 Tax=A... 145 2e-33 UniRef50_A3PQ79 Response regulator receiver protein n=3 Tax=Rhod... 144 3e-33 UniRef50_A6UCQ1 Regulatory protein LuxR n=2 Tax=Sinorhizobium Re... 143 4e-33 UniRef50_C6XPJ3 Transcriptional regulator, LuxR family n=1 Tax=H... 143 5e-33 UniRef50_C8Q1R2 Transcriptional regulator, LuxR family n=4 Tax=E... 143 5e-33 UniRef50_B6B644 Response regulator receiver protein, putative n=... 142 1e-32 UniRef50_A9E0R1 Transcription regulator, LuxR family, putative n... 141 2e-32 UniRef50_B3RAC5 Putative transcriptional regulator, LuxR family ... 141 2e-32 UniRef50_C8QBU4 Transcriptional regulator, LuxR family n=2 Tax=E... 141 2e-32 UniRef50_A0P1W5 Transcriptional regulator, LuxR family protein n... 141 3e-32 UniRef50_Q48KM4 Transcriptional regulator, LuxR family n=6 Tax=P... 140 5e-32 UniRef50_Q7MYV6 Similar to transcription regulator n=2 Tax=Photo... 138 2e-31 UniRef50_A9F751 Possible LuxR family protein n=1 Tax=Phaeobacter... 137 4e-31 UniRef50_Q4KAK4 Transcriptional regulator, LuxR family n=1 Tax=P... 137 4e-31 UniRef50_C9D313 Transcriptional regulator AhyR/asaR family n=1 T... 137 4e-31 UniRef50_Q28PZ4 Transcriptional regulator, LuxR family n=1 Tax=J... 135 9e-31 UniRef50_A4EXT1 Possible LuxR family protein n=1 Tax=Roseobacter... 135 1e-30 UniRef50_A9GRC0 Response regulator n=2 Tax=Phaeobacter gallaecie... 135 1e-30 UniRef50_A3JLR6 Transcriptional regulator, LuxR family protein n... 134 3e-30 UniRef50_B0SZK2 Transcriptional regulator, LuxR family n=4 Tax=A... 133 7e-30 UniRef50_B5ZP35 Transcriptional regulator, LuxR family n=1 Tax=R... 132 1e-29 UniRef50_C8RZ53 Transcriptional regulator, LuxR family n=1 Tax=R... 131 3e-29 UniRef50_B0T7Q6 Transcriptional regulator, LuxR family n=1 Tax=C... 130 4e-29 UniRef50_D0HD87 Transcriptional regulator LuxR family n=4 Tax=Vi... 129 7e-29 UniRef50_Q5LSK3 Transcriptional regulator, LuxR family n=1 Tax=R... 128 1e-28 UniRef50_A1B8E7 Transcriptional regulator, LuxR family n=1 Tax=P... 127 4e-28 UniRef50_B7QYZ5 Transcriptional regulator, LuxR family protein n... 126 5e-28 UniRef50_A9D9Y9 Putative transcriptional regulator protein, LuxR... 126 5e-28 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 126 5e-28 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 126 7e-28 UniRef50_Q28US6 Transcriptional regulator, LuxR family n=4 Tax=R... 126 9e-28 UniRef50_A4U0F1 Regulatory protein, LuxR n=1 Tax=Magnetospirillu... 125 1e-27 UniRef50_A3VE32 Autoinducer-binding transcriptional regulator, L... 125 1e-27 Sequences not found previously or not previously below threshold: >UniRef50_P07026 Regulatory protein sdiA n=104 Tax=Enterobacteriaceae RepID=SDIA_ECOLI Length = 240 Score = 271 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 240/240 (100%), Positives = 240/240 (100%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY Sbjct: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT Sbjct: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF Sbjct: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI Sbjct: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 >UniRef50_UPI00016A4E80 probable transcriptional activator of quorum sensing autoinducer synthesis transcription regulator protein n=1 Tax=Burkholderia oklahomensis EO147 RepID=UPI00016A4E80 Length = 236 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 78/229 (34%), Positives = 117/229 (51%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 +LL + T+ E++ +E ++L +D +S HP+PFT+P++ +NYPE W Y Sbjct: 7 DLLLSITQKSTSSEIFSSLEKYTRELGFDNFSYGFCHPIPFTKPRIVILSNYPERWRGRY 66 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALG 131 ++ IDP + SQ W++ S+ + W+ A AHGL G + ++ + LG Sbjct: 67 SELGYVNIDPTVLHGRNSQSPFTWSELPTSDVRSFWDEANAHGLVVGWAKSILDSDGGLG 126 Query: 132 FLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWT 191 L+ +R + L+M LL + M L + + S RE EILRW Sbjct: 127 MLTLARSNEELCGKELAAKNLRMCLLADLTHMVLSDAYRKEMTASADKLSAREVEILRWH 186 Query: 192 AEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 A+GKT+ EI ILSIS +TV FH KN K+ A NKT AA GL+ Sbjct: 187 ADGKTADEIGRILSISIDTVKFHTKNAVVKLGASNKTAAVARAAIMGLL 235 >UniRef50_B5EJV5 Transcriptional regulator, LuxR family n=4 Tax=Acidithiobacillus ferrooxidans RepID=B5EJV5_ACIF5 Length = 237 Score = 248 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 85/233 (36%), Positives = 125/233 (53%), Gaps = 1/233 (0%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWV 68 W+ +L FQ +E +V A++LE+DY + +R P+P RPK ++NYP W Sbjct: 4 WKEDLLQTFQSIECERQVLAMASEMARKLEFDYCAYGLRMPLPLVRPKTVLFSNYPAVWQ 63 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNR 128 + YQA+ + AIDP + S ++W+DDLF+ A+ LWE AR+ GLR G+ Sbjct: 64 ARYQAQEYQAIDPTVRHAMRSPSPVVWSDDLFAPARELWEEARSFGLRAGLAHTCRDAGG 123 Query: 129 ALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR-LNDEIVMTPEMNFSKREKEI 187 G L+ +R + LV+ ++++R + ++ + S RE E+ Sbjct: 124 MGGMLTLARAGETVTTAEWQAKACHILWLVQAVHLSMIRVIAPKLQPEIAVQLSCREVEV 183 Query: 188 LRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 LRWT EGKTS EIA IL+I+E TVNFH K+NA NKT AA GL+ Sbjct: 184 LRWTGEGKTSGEIANILNITERTVNFHISKAMAKLNAVNKTAAVLQAAMLGLL 236 >UniRef50_B2I0W2 DNA-binding HTH domain-containing protein n=9 Tax=Acinetobacter RepID=B2I0W2_ACIBC Length = 238 Score = 247 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 74/236 (31%), Positives = 114/236 (48%), Gaps = 3/236 (1%) Query: 8 SWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAW 67 SW+ +L F ++ +++ ++ A +L +DY + ++ P+ PK NYPEAW Sbjct: 3 SWQEDLLSAFLVVKNEYQLFDIVKSIASRLGFDYCAYGMQSPLSIAEPKTIMLNNYPEAW 62 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGLRRGVTQYLML 125 Y + ++ IDP + S L+W+ + WE AR++GL G Q Sbjct: 63 QKRYVEQQYVKIDPTVQHCMVSLQPLVWSSQSAKTQAEKDFWEEARSYGLNVGWAQSSRD 122 Query: 126 PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRL-NDEIVMTPEMNFSKRE 184 G L+ +R + + M L + ++ ++ ND + + RE Sbjct: 123 FIGTRGMLTLARSNDQLSEKEQKAQYTNMYWLTQTVHSSIAKIVNDVEFAKFNLYLTNRE 182 Query: 185 KEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 KE LRWTAEGKTSAEIA IL ++E TVNFH N +K+N NK A A GL+ Sbjct: 183 KEALRWTAEGKTSAEIAQILGVTERTVNFHLSNSMQKLNVNNKISAAIRAVMLGLL 238 >UniRef50_C5D054 Transcriptional regulator, LuxR family n=1 Tax=Variovorax paradoxus S110 RepID=C5D054_VARPS Length = 235 Score = 242 bits (619), Expect = 6e-63, Method: Composition-based stats. Identities = 77/234 (32%), Positives = 125/234 (53%), Gaps = 1/234 (0%) Query: 7 FSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEA 66 W + +L R +V ++ + A+QL +++ + +R VPFTRPK ++ Y E Sbjct: 2 NEWTQDVLGRLDEASEPSQVLAQVSVAARQLGFEHCAYGLRTLVPFTRPKTLMFSTYDER 61 Query: 67 WVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLP 126 W Y + +L +DP + S ++W++++F +A +W+ AR+ GLR G Q + P Sbjct: 62 WSRRYISAGYLQVDPTVAHGVHSGTPVIWSNEVFRDAPQMWDEARSFGLRVGWAQSVFEP 121 Query: 127 NRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKE 186 + +G LS +R S L Q LV ++ A RL + E +KR+ E Sbjct: 122 DARVGMLSLARSSEPLTAAEMRAKDLLFQGLVNKAHRAFCRLLGGPLAGIEP-LTKRQVE 180 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +LRWT +GKTS EIA IL IS+ TV+FH +N ++ A K+ A +A+ GL+ Sbjct: 181 VLRWTGDGKTSDEIAAILCISKPTVDFHLRNAMARLGASTKSSAAAFASRLGLL 234 >UniRef50_Q2Y6B5 Transcriptional regulator, LuxR family n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6B5_NITMU Length = 244 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 5/234 (2%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 T+ ++ EE++ A+ + ++++ V+ TRP + YPE W +Y Sbjct: 5 TLFESLLNCDSVEELHSATTTIARAMGFEHFLYGVQVNTSLTRPYRFILSCYPEEWRKHY 64 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWNDDLF--SEAQPLWEAARAHGLRRGVTQYLMLPNRA 129 + + DP ++ + ++W ++F + A+ GL G + + Sbjct: 65 DKEGYANFDPTVSHCARTSIPIIWKKEIFKGRRETRVRNEAKDCGLVSGASFSVHGGRGE 124 Query: 130 LGFLSFS-RCSAREIPILSDELQLKMQLLVRESLMALMR--LNDEIVMTPEMNFSKREKE 186 LS + +RE K QLL A+ R L+ + + N ++RE+E Sbjct: 125 AAMLSLATSRESREAQNDILATMAKAQLLTCYLHEAVQRIVLSKGPLPVKKANLTEREQE 184 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L W AEGKT EIA I+ ISE TV FH +N +K+ N+ Q A + GLI Sbjct: 185 CLLWAAEGKTGWEIANIVKISERTVTFHLQNAIQKLGVVNRQQAISRALSMGLI 238 >UniRef50_A0MSL2 Transcriptional regulator n=8 Tax=Burkholderia cepacia complex RepID=A0MSL2_BURVI Length = 237 Score = 240 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 72/233 (30%), Positives = 114/233 (48%), Gaps = 1/233 (0%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWV 68 WR L F ++ +V+ E + L +D+ S +R P+P ++P+ +NYP+ WV Sbjct: 4 WREKYLNGFATAKSEADVFLEFSADVRALGFDHCSFGLRIPLPISKPQFMLQSNYPQTWV 63 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNR 128 Y ++N+ A+DP + L+W D ++ WE A HGLR G + Sbjct: 64 ERYVSQNYFAVDPTVRHGLSRMSPLIWRADSQTQCVQFWEEADQHGLRHGWCMPSVSRTG 123 Query: 129 ALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMAL-MRLNDEIVMTPEMNFSKREKEI 187 A+G ++ R E +M L + A+ M L +V + + RE+E Sbjct: 124 AIGLITMVRSGEPIEERELAEKGYQMSWLANTANYAMSMHLLQRLVPEYTVELTVREREA 183 Query: 188 LRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L+W+A GKT AEI I+ + + TV FH N +K+NA NKT+ A A GL+ Sbjct: 184 LQWSAAGKTYAEIGKIMHVDDRTVKFHLVNAMRKLNAANKTEAAVKATMLGLL 236 >UniRef50_P54292 Regulatory protein rhlR n=12 Tax=Bacteria RepID=RHLR_PSEAE Length = 241 Score = 238 bits (607), Expect = 1e-61, Method: Composition-based stats. Identities = 97/239 (40%), Positives = 144/239 (60%) Query: 2 QDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYT 61 D F W + Q + ++ V+ +E + ++L +DYY+ VRH +PFTRPK + Sbjct: 3 NDGGFLLWWDGLRSEMQPIHDSQGVFAVLEKEVRRLGFDYYAYGVRHTIPFTRPKTEVHG 62 Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQ 121 YP+AW+ YQ +N+ A+DP + S ++W+D LF +++ LW AR GL G T Sbjct: 63 TYPKAWLERYQMQNYGAVDPAILNGLRSSEMVVWSDSLFDQSRMLWNEARDWGLCVGATL 122 Query: 122 YLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFS 181 + PN L LS +R +E++L+++ ++ L L ++M+ + S Sbjct: 123 PIRAPNNLLSVLSVARDQQNISSFEREEIRLRLRCMIELLTQKLTDLEHPMLMSNPVCLS 182 Query: 182 KREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 RE+EIL+WTA+GK+S EIA+ILSISE+TVNFH KN+QKK +APNKT A YAAA GLI Sbjct: 183 HREREILQWTADGKSSGEIAIILSISESTVNFHHKNIQKKFDAPNKTLAAAYAAALGLI 241 >UniRef50_A4BB65 LuxR, transcriptional regulator n=1 Tax=Reinekea blandensis MED297 RepID=A4BB65_9GAMM Length = 240 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 64/235 (27%), Positives = 98/235 (41%), Gaps = 6/235 (2%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 +L R Q+ ++ E+ +E +Q +E+DY+ + P T + Y NYP W Y Sbjct: 2 DLLERLQQAQSTSELPEILESISQVVEFDYFLFGLALPNSITHSDILMYDNYPGEWRRVY 61 Query: 72 QAKNFLAIDPVLNPENFSQGHLMW-----NDDLFSEAQPLWEAARAHGLRRGVTQYLMLP 126 + DP++ + + W + + A A GL+ G + + Sbjct: 62 DESGYAKRDPIVQYSISNYMPVTWAQISESPSYSRSDLKIMWEAEASGLKAGFSLPIHGA 121 Query: 127 NRALGFLSFSRCSAREIPILS-DELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREK 185 G +SF+ + L E +Q+LV A+ RL P +KRE Sbjct: 122 VGEFGMISFASNHNTDEQRLKYAEAIPVIQMLVPAIQDAVKRLRVSESKEPPAKLTKREI 181 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E L W EGK+S EI+ IL SE T FH N K+ A N+ Q A G+I Sbjct: 182 ECLTWATEGKSSWEISQILGCSERTAIFHLSNAANKLGATNRYQAISKALLCGII 236 >UniRef50_UPI00016A49A6 transcriptional regulator, LuxR family protein n=1 Tax=Burkholderia oklahomensis C6786 RepID=UPI00016A49A6 Length = 238 Score = 237 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 6/238 (2%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWV 68 + +L + +T +++ + A +L +DY+ + V +NYP AW Sbjct: 1 MTQDILDQTSSAKTERDIHDILSRIAARLGFDYFFYGTLSDMRKPENPVKTVSNYPMAWQ 60 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLF--SEAQPLWEAARAHGLRRGVTQYLMLP 126 Y++ ++ IDPV+ L WND + E + E AR HGL G + + Sbjct: 61 EKYKSSGYIRIDPVVRHCGHRLIPLQWNDGICHCREQRNFMEDARGHGLVAGASFPVHSR 120 Query: 127 NRALGFLSFSRCSAREIPILSDELQLKM----QLLVRESLMALMRLNDEIVMTPEMNFSK 182 + + LS + SA LS + L + R+++ P + Sbjct: 121 HGEVSILSLASRSAGGTTSLSAKHAPATFAQGALAAAFVREGMERISNRPDHEPSAPLTH 180 Query: 183 REKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 RE E L+W A GK+S EIAMIL ISEN V +H K + K + ++ A A+G++ Sbjct: 181 RELECLKWIAAGKSSWEIAMILGISENGVLYHVKKLMAKFDVQSRHLAVLKAMASGVV 238 >UniRef50_C8QEN4 Transcriptional regulator, LuxR family n=1 Tax=Pantoea sp. At-9b RepID=C8QEN4_9ENTR Length = 240 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 108/240 (45%), Positives = 154/240 (64%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 M ++F WR ++FQ + ++ ++ + L +DY++ ++HPVPFTRP++ + Sbjct: 1 MTTDNYFVWRGETEIQFQAVTAVLQLKALLQKHIETLGFDYFAFLIQHPVPFTRPRIFLF 60 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120 + YPE WV +Y+++N+ A+DPVL + W DLF+ A LW A A+GL G + Sbjct: 61 STYPEDWVKHYESENYYAVDPVLLLCQRPGHGVEWTRDLFTGAGNLWAEANAYGLMSGFS 120 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 M NRA+G LS + + L EL++K+ L SL L RLND ++ +F Sbjct: 121 CSAMASNRAIGILSIASGQQSKTQHLRVELEVKLHFLAELSLRVLERLNDNAMVVLSNDF 180 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 S+RE EIL+WTAEGKTSAEI++IL+ISE+TVNFHQKNMQK+ N NKTQ+ACYAAA GLI Sbjct: 181 SQRELEILKWTAEGKTSAEISLILAISEHTVNFHQKNMQKRFNVSNKTQIACYAAAIGLI 240 >UniRef50_B7VAX6 Quorum-sensing control repressor n=7 Tax=Pseudomonas aeruginosa RepID=B7VAX6_PSEA8 Length = 237 Score = 233 bits (594), Expect = 4e-60, Method: Composition-based stats. Identities = 72/234 (30%), Positives = 108/234 (46%), Gaps = 1/234 (0%) Query: 8 SWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAW 67 R L R+ T EE + + ++++S R P P T PK F +NYP W Sbjct: 3 DEREGYLEILSRITTEEEFFSLVLEICGNYGFEFFSFGARAPFPLTAPKYHFLSNYPGEW 62 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPN 127 S Y ++++ +IDP++ L+WN + F E + WE A HG+R G + + Sbjct: 63 KSRYISEDYTSIDPIVRHGLLEYTPLIWNGEDFQENRFFWEEALHHGIRHGWSIPVRGKY 122 Query: 128 RALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR-LNDEIVMTPEMNFSKREKE 186 + LS R S E + + + L IV + + RE E Sbjct: 123 GLISMLSLVRSSESIAATEILEKESFLLWITSMLQATFGDLLAPRIVPESNVRLTARETE 182 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +L+WTA GKT EI +ILSI + TV FH N +K+N+ NK + A A GL+ Sbjct: 183 MLKWTAVGKTYGEIGLILSIDQRTVKFHIVNAMRKLNSSNKAEATMKAYAIGLL 236 >UniRef50_B1Z3D8 Transcriptional regulator, LuxR family n=4 Tax=Burkholderia ambifaria RepID=B1Z3D8_BURA4 Length = 228 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 71/228 (31%), Positives = 114/228 (50%), Gaps = 2/228 (0%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQA 73 + R + ++V+ + QA+ L+++ + R P+P TRP YPE+W Y Sbjct: 1 MTTLSRALSFDDVFEIVAAQARALDFEMCAYGARDPLPVTRPTFRTRNTYPESWQQRYIE 60 Query: 74 KNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFL 133 N+ A DPV+ L+W D ++ WE A+AHG+ G +Q + + + Sbjct: 61 GNYFARDPVVRYGLIYTSPLVWPVDACADES-FWEEAKAHGVAHGWSQPIRDKHGRIAMW 119 Query: 134 SFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT-PEMNFSKREKEILRWTA 192 S +R + + + ++ L + RL D F+ REKE+L+W A Sbjct: 120 SVARSADPISDLELAATESRLIYLAHAAHAVNSRLVDAPAAAMQMGPFTTREKEVLKWAA 179 Query: 193 EGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +GKT+ EIA ILSISE T+ FH +N+ +K+N+ NKTQ A G+I Sbjct: 180 DGKTALEIASILSISERTITFHMQNIMEKLNSVNKTQAIVKAVLLGII 227 >UniRef50_D0KZC8 Transcriptional regulator, LuxR family n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZC8_HALNC Length = 237 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 71/233 (30%), Positives = 119/233 (51%), Gaps = 1/233 (0%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWV 68 W+ ++ + Q E E + +IE +A L ++ + +R + T KV NY + W Sbjct: 4 WQGDLVSQIQSAENEESAFKKIEDEALALGFENAAYGLRLNLNITNQKVVMMNNYSQNWK 63 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNR 128 Y +N+++IDPV+ N S ++W+ + +E + WE A +H L+ G +Q Sbjct: 64 RRYTDENYISIDPVVKHGNKSLMPVVWSSNKITENKNFWEDAYSHNLKYGWSQASADQVG 123 Query: 129 ALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR-LNDEIVMTPEMNFSKREKEI 187 G L+ +R + ELQ ++ L + S + + + + + + REK++ Sbjct: 124 RRGLLTLTRGHEPISELELKELQYRLTWLTQISHHCMSEIITTKKMPETMITLTMREKDV 183 Query: 188 LRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 LRWTA GKTS E + I++I+E TVNFH N +K+N NKT AA GL+ Sbjct: 184 LRWTAAGKTSGETSTIMNITERTVNFHIANSMQKLNCINKTSATVRAAMLGLL 236 >UniRef50_Q2SXK0 Autoinducer-binding transcriptional regulator, LuxR family n=31 Tax=Burkholderiaceae RepID=Q2SXK0_BURTA Length = 241 Score = 230 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 79/234 (33%), Positives = 124/234 (52%), Gaps = 1/234 (0%) Query: 8 SWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAW 67 +W +L + +E + IE A L+++Y + +R P P +RP++ +N+PE W Sbjct: 7 NWAEDLLAGLDSARSEDEAFRSIETAATALDFEYCAYGLRVPWPLSRPRIETRSNFPEQW 66 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPN 127 Y FL +DP+L SQ ++ N+ LF+ + +W A++ GLR G Q Sbjct: 67 KRRYVEAGFLDVDPILAHGRRSQQPVVLNETLFASSHQMWVEAQSFGLRFGWAQSSFDAY 126 Query: 128 RALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLN-DEIVMTPEMNFSKREKE 186 +G L+ R D + +M+ LVR + AL R+ +++ PE ++RE E Sbjct: 127 GGMGMLALVRSREPVTHAELDAKEYRMRWLVRTAHAALGRMMLPKLMADPERGLTEREVE 186 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +L+W A+GKTS EI+ IL+IS +TVNFH KN K+ NKT AA GL+ Sbjct: 187 VLKWAADGKTSGEISKILAISVDTVNFHVKNAILKLRTANKTAAVVRAAMLGLL 240 >UniRef50_A4U2E2 Regulatory protein, LuxR:Autoinducer-binding n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U2E2_9PROT Length = 242 Score = 229 bits (584), Expect = 6e-59, Method: Composition-based stats. Identities = 64/245 (26%), Positives = 106/245 (43%), Gaps = 10/245 (4%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYS---LCVRHPVPFTRPKV 57 M +F + R R +TA + E++ + + + Sbjct: 1 MVGDNF--RLGDFIERTLRADTAPALMSELKSALVHWGFPHMACGAFGEPERPLDDMSVP 58 Query: 58 AFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND--DLFSEAQPLWEAARAHGL 115 A +YPE W YY KN++ IDPV+ + W+ DL + + +++ A GL Sbjct: 59 AVVVDYPEEWQKYYFEKNYVTIDPVITRACQAYVPYRWDQLRDLTNPQKRMFKEATEAGL 118 Query: 116 RRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT 175 R G+T + PN ++ S + I +LV + L+ + + Sbjct: 119 RHGITVPVHGPNGSIFVASVASPH---TDIDHLRSLSVANVLVTQVYSVLVGMRHPGAPS 175 Query: 176 PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 ++ + RE+E L W+A GK+S +I +IL+IS+NTVNFH KN K+ A + A Sbjct: 176 APVSLTARERECLIWSARGKSSWDIGVILNISDNTVNFHLKNAMGKLKASTRVLAIVKAI 235 Query: 236 ATGLI 240 GLI Sbjct: 236 RMGLI 240 >UniRef50_D0B4P5 Transcriptional activator n=39 Tax=Brucellaceae RepID=D0B4P5_BRUME Length = 238 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 69/233 (29%), Positives = 116/233 (49%), Gaps = 2/233 (0%) Query: 10 RRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVS 69 T Q ++A++++ ++ A L ++Y S + P K + +P+ W Sbjct: 6 WETFYDAMQSADSADQLFEIVKNYAHDLGFEYVSYVMSIPSLNGSLKWVRFGAFPDGWEQ 65 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRA 129 Y A+N+ IDP+L S L+W+ + F+ A +W A +GL+ G++Q Sbjct: 66 RYLAQNYAEIDPLLRRGVNSIDPLIWSQNFFASAPQIWADAVKYGLKVGISQPCWAAQGV 125 Query: 130 LGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT--PEMNFSKREKEI 187 G LSF R P L+ ++Q++ +++ D ++ +++ + RE+EI Sbjct: 126 FGLLSFVRSGPALTPGEISMLRRQLQMVTNLLHLSMYERVDVPAISCIGDVSLTLREREI 185 Query: 188 LRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 LRWT+EGKT+ I IL+IS TVNFH N+ K+ A NK Q A GL+ Sbjct: 186 LRWTSEGKTAEIIGTILNISTRTVNFHISNVLTKLVAVNKVQAVAKARTFGLL 238 >UniRef50_P74946 Transcriptional activator protein vanR n=3 Tax=Vibrionaceae RepID=VANR_VIBAN Length = 240 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 49/230 (21%), Positives = 99/230 (43%), Gaps = 2/230 (0%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQ 72 ++ Q++ + +++ + + + ++++ + + NYP +W Y Sbjct: 7 LIQENQQITSHDDLENVLNGLNNLIGHEFFLFGLSFQPTLKTSETLVTDNYPNSWRQQYD 66 Query: 73 AKNFLAIDPVLNPENFSQGHLMWNDD--LFSEAQPLWEAARAHGLRRGVTQYLMLPNRAL 130 F+ IDP++ + + W+D + ++ + ++E AR +GL+ G + + Sbjct: 67 ESGFMHIDPIVKYSITNFLPIRWDDAKRVNNDGRVIFEEARCNGLKAGFSIPIHGLRGEF 126 Query: 131 GFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRW 190 G +SF+ + + + ++ + P + RE + L W Sbjct: 127 GMISFATSDTKSYDLNQQSIHTSQLIVPLLAHNIGNITRYHKDAKPRAVLTAREVQCLAW 186 Query: 191 TAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 AEGK++ EIA I++ SE TV FH N KK+ A N+ Q A G I Sbjct: 187 AAEGKSAWEIATIINTSERTVKFHFSNACKKLGATNRYQAITKAILGGYI 236 >UniRef50_P58590 Transcriptional activator protein solR n=8 Tax=Burkholderiaceae RepID=SOLR1_RALSO Length = 236 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 76/232 (32%), Positives = 112/232 (48%), Gaps = 1/232 (0%) Query: 10 RRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVS 69 + F + +++ +I +QL +DY +R P+P ++P VA + YP W+ Sbjct: 5 FQDAYHAFHTAQDERQLFRQIASVVRQLGFDYCCYGIRVPLPVSKPAVAIFDTYPAGWME 64 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRA 129 +YQA FL IDP + S ++W + EA LW AR GL GV + + A Sbjct: 65 HYQASGFLEIDPTVRTGASSSDLIIWPVSIRDEAARLWSDARDFGLNIGVARSSWTAHGA 124 Query: 130 LGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR-LNDEIVMTPEMNFSKREKEIL 188 G L+ +R + ++L L + + L ++V + RE+E+L Sbjct: 125 FGLLTLARRADPLTAAELEQLSATTNWLANLAHALMSPFLMPKLVPESSAALTAREREVL 184 Query: 189 RWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 WT EGKT+ EI IL ISE TVNFH N+ K+ A NK Q A A GLI Sbjct: 185 CWTGEGKTAYEIGQILRISERTVNFHVNNVLLKLAATNKVQAVVKAIAIGLI 236 >UniRef50_A9JPW9 PmrR protein n=1 Tax=Pseudomonas sp. RW10S2 RepID=A9JPW9_9PSED Length = 236 Score = 227 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 66/218 (30%), Positives = 110/218 (50%), Gaps = 1/218 (0%) Query: 7 FSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEA 66 W ML + + E++ A+ L +DY + +R P+P T+P++ +NY Sbjct: 1 MQWMGDMLSAVYDARDTQTLLEEVKAAARHLGFDYCAYGLRTPLPVTKPRIFMLSNYSRP 60 Query: 67 WVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLP 126 W +Y A +L +DP + S ++W D++F++A LW+ AR GLR G Q + Sbjct: 61 WCDHYHANGYLLLDPTVRHCQRSMQPVVWGDEIFADAPQLWDEARQAGLRHGWAQSCLEG 120 Query: 127 NRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR-LNDEIVMTPEMNFSKREK 185 ++ G L+ +R + +M+ L + R L+D P+ S+RE+ Sbjct: 121 SKGGGMLTLARSGEGIGEGELRAHETRMRWLANVAHQGFSRLLSDSWQPQPQSPLSERER 180 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKIN 223 E+LRW A+GKT E+A IL++S TV FH +N K+ Sbjct: 181 EVLRWAADGKTLNEVADILTLSIETVKFHTRNAGAKLG 218 >UniRef50_A4JSV0 Transcriptional regulator, LuxR family n=2 Tax=Burkholderia cepacia complex RepID=A4JSV0_BURVG Length = 239 Score = 226 bits (577), Expect = 5e-58, Method: Composition-based stats. Identities = 76/233 (32%), Positives = 114/233 (48%), Gaps = 2/233 (0%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWV 68 WR ++L ++ ETA + + + + L ++Y++ +R +P TRP + N+P+AW Sbjct: 4 WRESLLASMEQAETASDAFDGLAPAVRALGFEYHAYVLRVTIPITRPASMEWNNFPQAWR 63 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNR 128 ++Y K + DPVL+ + W L + W A GLR G +Q L Sbjct: 64 AHYAQKRYQHADPVLHYGQACTRPMPWPGPL-AGHDAFWRDAADFGLRHGWSQTLRDHRG 122 Query: 129 ALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIV-MTPEMNFSKREKEI 187 A+G S R P + +M L + + L V + M S REKE+ Sbjct: 123 AMGTFSLVRGGPPISPEELRRTEPEMIWLCQFVHATMSNLIVSDVMPSGAMRLSLREKEV 182 Query: 188 LRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L WTAEGKT+AE+A IL ++E V FH +N K++A NKT AA GLI Sbjct: 183 LHWTAEGKTAAEVAAILQLTERNVGFHIQNAMDKLDATNKTHATVKAAMLGLI 235 >UniRef50_Q9AH79 MupR n=2 Tax=Pseudomonas fluorescens RepID=Q9AH79_PSEFL Length = 234 Score = 226 bits (577), Expect = 5e-58, Method: Composition-based stats. Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 4/232 (1%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQ 72 ML ET E + A++ + V+ + +NY +W S Y Sbjct: 1 MLEDILMCETLEAWSKVLFALAKEYGFSSVLFGVKPTISTPFSSSTIISNYSRSWRSIYD 60 Query: 73 AKNFLAIDPVLNPENFSQGHLMWNDDLF--SEAQPLWEAARAHGLRRGVTQYLMLPNRAL 130 A + +DPV+ S L+W + F Q L+EAA A G+ G+ + P Sbjct: 61 ANAYYEVDPVVFHCLNSSLPLVWTKENFINKPEQQLYEAASASGVCSGLCMPIHGPRGEF 120 Query: 131 GFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRL--NDEIVMTPEMNFSKREKEIL 188 G L+F ++ + + L+ + + ++ E + + RE E L Sbjct: 121 GMLNFITDEKSPADVIRSKGLPQFALMRDYLIESFQKIQSAAEKEVEKPPKLTARELECL 180 Query: 189 RWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +W A GKTS EI+ ILS +E TVN+H N +K NA ++ +GL+ Sbjct: 181 KWVAAGKTSWEISRILSCAEVTVNYHVTNFMRKFNAESRQHAVISGIRSGLV 232 >UniRef50_Q51786 Transcriptional activator protein phzR n=6 Tax=Pseudomonas RepID=PHZR_PSEFL Length = 244 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 74/241 (30%), Positives = 116/241 (48%), Gaps = 1/241 (0%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 M+ W F + EE ++L +D+++ + PF RPK Y Sbjct: 4 MELGQLLGWDAYFYSIFAQAMNMEEFTVVALRALRELRFDFFAYGMCSVTPFMRPKTYMY 63 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120 NYPE W+ YQA N+ IDP + S ++W+++LF LW A L G+ Sbjct: 64 GNYPEHWLQRYQAANYALIDPTVKHSKVSSAPILWSNELFRNCPDLWSEANDSSLCHGLA 123 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVM-TPEMN 179 Q +G LS +R + L+ + +L + L ++ ++ Sbjct: 124 QPSFNTQGRVGVLSLARKDNAISLQEFEALKPVTKAFAAAALEKISALETDVRAFNTDVE 183 Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 FS+RE ++LRWTA+GKTS EI +I+ + +TVN+H +N+Q+KI A N+ Q YA A G Sbjct: 184 FSERECDVLRWTADGKTSEEIGVIMGVCTDTVNYHHRNIQRKIGASNRVQAVSYAVALGY 243 Query: 240 I 240 I Sbjct: 244 I 244 >UniRef50_A1KWS2 Quorum sensing LuxR family sensor regulator n=3 Tax=Burkholderia RepID=A1KWS2_BURGL Length = 349 Score = 225 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 70/226 (30%), Positives = 117/226 (51%), Gaps = 1/226 (0%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWV 68 + +F E ++++H++ +++L ++Y +R P P ++P V + YP W+ Sbjct: 4 RWQDAYHQFNTAENEQQLFHQVSAYSKRLGFEYCCYGIRVPQPGSQPLVEIFDTYPPGWM 63 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNR 128 ++YQA+N++ IDP + S ++W D +E LW AR G+ GV Q Sbjct: 64 AHYQARNYIEIDPTVRDGAASPNMIIWPDADAAEQPSLWRDARDFGMSVGVAQSSWAARG 123 Query: 129 ALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR-LNDEIVMTPEMNFSKREKEI 187 G L+ +R S R P + L L+ L S + R L ++ ++ +KRE+E+ Sbjct: 124 VFGLLTIARRSDRLTPAEINSLTLQANWLANLSHSLMGRFLVPKLSPAASISLTKREREV 183 Query: 188 LRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 L WT+EG+T++EI L+ISE TV FH N+ K+ A NK Q Sbjct: 184 LSWTSEGRTASEIGEQLNISERTVTFHINNILAKLGAANKVQAVGR 229 >UniRef50_D2TD82 DNA-binding transcriptional activator SdiA n=2 Tax=Erwinia pyrifoliae RepID=D2TD82_ERWPY Length = 242 Score = 225 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 108/240 (45%), Positives = 160/240 (66%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 M +D+F WR + +++ + IE Q ++LE D+YSL +RHPVPFTRPK Y Sbjct: 3 MTSEDYFIWRADIKSAYEKGGGIVHITRIIEQQLRELELDFYSLFIRHPVPFTRPKTFLY 62 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120 +NYPE W+ +Y ++F +DPVL +W+D+ S ++E AR +G+ G++ Sbjct: 63 SNYPEDWLEHYFREDFYQLDPVLKMCGSPGKIWLWDDEAISSGVRVFENARNYGIFHGLS 122 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 +M NR++G S S ++ + L+ ++LK+Q + S+ +L+++ND + T +++ Sbjct: 123 CSVMASNRSVGIFSMSTANSLKTIELTPVMELKIQYISELSMASLIKINDISMATTKLDL 182 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 S+RE EIL+WTAEGKTSAEI++ILSISENTVNFHQK MQK+ NAPNKTQ+A YAAA GLI Sbjct: 183 SQRELEILKWTAEGKTSAEISLILSISENTVNFHQKKMQKRFNAPNKTQIASYAAAIGLI 242 >UniRef50_C4I3H7 Autoinducer-binding transcriptional regulator, LuxR family n=22 Tax=Burkholderia RepID=C4I3H7_BURPS Length = 236 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 68/240 (28%), Positives = 109/240 (45%), Gaps = 4/240 (1%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 M+ DF + L F R E + V + A L Y+Y + +R P P + P + Sbjct: 1 MEMHDFLQFW---LNEFSRSENPQHVISVLTRAAATLGYEYAAYGMRRPFPISNPPILMV 57 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120 +NYP W Y F ID + S + W+ + W A + G+ G + Sbjct: 58 SNYPARWQERYIEARFANIDGAVKAALGSDRPVTWSAPANASKSAFWAEALSFGIAHGWS 117 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 + A+G L+ SR + + L + ++ + + Sbjct: 118 SASRGADGAIGVLTLSRTQDPIDTAEKFRNESIVHWLANVAHASMAPFLP-AADEFDPDL 176 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 ++RE ++L+WTA+GKT+ EIA+ILSISE+TVNFH KN+ K+ + NK Q AA G++ Sbjct: 177 TRRETDVLKWTADGKTAYEIALILSISESTVNFHVKNIVSKLGSTNKIQAVAKAALMGML 236 >UniRef50_B2JQL2 Transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=B2JQL2_BURP8 Length = 234 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 61/231 (26%), Positives = 94/231 (40%), Gaps = 4/231 (1%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQA 73 + E + E+ A +D + + + Y W +Y Sbjct: 1 MSPLLEAENDVTWFRELARLADDWGFDRVLVGILPRPGMRLEDAFIRSTYSPTWRQFYNE 60 Query: 74 KNFLAIDPVLNPENFSQGHLMWNDDLFS--EAQPLWEAARAHGLRRGVTQYLMLPNRALG 131 + F IDP + L+W+ DLF AQ ++E ARAHGLR GV+ + P + G Sbjct: 61 QGFAHIDPTVAHCMTKSSPLIWSPDLFDTYPAQTMYEEARAHGLRAGVSLPIHGPRQESG 120 Query: 132 FLSFSRCSAREIPILS--DELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILR 189 + F D + + LL + + + RE+E L+ Sbjct: 121 LICFVNDHNPSDDFWRHLDVVLPNLVLLRDLVIDTSQPHLNTHTQALVPKLTPREQECLK 180 Query: 190 WTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 WTA GK++ EI+ IL+ SE VNFH KN++ K ++ A A GLI Sbjct: 181 WTARGKSTWEISHILNCSEAVVNFHLKNIRTKFGVNSRRAAAVIATQLGLI 231 >UniRef50_Q0B318 Transcriptional regulator, LuxR family n=3 Tax=Burkholderia RepID=Q0B318_BURCM Length = 237 Score = 223 bits (569), Expect = 4e-57, Method: Composition-based stats. Identities = 74/234 (31%), Positives = 125/234 (53%), Gaps = 1/234 (0%) Query: 8 SWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAW 67 +W +L + + E + +I +++ ++Y + C++ P P +R KV ++N+PE W Sbjct: 3 NWMEQILYEIEATHSEHEAFGKIASAVKEIGFEYSAYCLQTPWPLSRRKVLVFSNFPEPW 62 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPN 127 Y ++ +DP+L S ++W+D +F LWE A+AHGLR G + + Sbjct: 63 QRRYHDARYIDVDPLLRRGRQSYAPVIWSDAVFEGTPQLWEEAQAHGLRYGYSLAAVSNC 122 Query: 128 RALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR-LNDEIVMTPEMNFSKREKE 186 G +S +R + +LKM+ LV + +A+ R + ++ ++ + RE E Sbjct: 123 GVSGMMSMARSHTPLTVRELQQQELKMRWLVNAAHLAITRAVLPKLSPEGDIELTDREVE 182 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +L+W A+GKT+AEI+MI+ IS TVNFH KN K+N N T AA GL+ Sbjct: 183 VLKWVADGKTAAEISMIMLISVYTVNFHVKNAVTKLNTSNATAAVARAAMLGLL 236 >UniRef50_Q5EM19 ExpR n=2 Tax=Erwinia RepID=Q5EM19_ERWAM Length = 240 Score = 222 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 109/240 (45%), Positives = 164/240 (68%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 M +++F WR + +++ + + IE Q ++LE D+YSL +RHPVPFTRPK Y Sbjct: 1 MTSENYFIWRADIKSAYEKGSGTDHITRLIEQQLRELELDFYSLFIRHPVPFTRPKTFLY 60 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120 +NYP+ W+ +Y + F +DPVL + +W+D S ++E AR +G+ G++ Sbjct: 61 SNYPQDWLDHYWREGFYQLDPVLEMCSSPGKIWLWDDKTISAGLCVFEHARNYGIFHGLS 120 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 +M NR++G LS S +++++ L+ E +LK+Q ++ S+ AL+ +ND + T +++F Sbjct: 121 CSVMASNRSVGILSMSTANSQKLIKLTTETELKIQYVLELSMAALININDISMATTKLDF 180 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 S+RE EIL+WTAEGKTSAEI++ILSIS+NTVNFHQK MQK+ NAPNKTQ+A YAAA GLI Sbjct: 181 SERELEILKWTAEGKTSAEISLILSISQNTVNFHQKKMQKRFNAPNKTQIASYAAAVGLI 240 >UniRef50_Q88E21 Transcriptional regulator, LuxR family n=7 Tax=Pseudomonas RepID=Q88E21_PSEPK Length = 279 Score = 222 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 73/234 (31%), Positives = 115/234 (49%) Query: 7 FSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEA 66 W+ L F + ++++ AQ L+ DY L +R + P++ Y+NYP Sbjct: 46 LHWKPEYLRAFVSERSPQKLFDIAVHLAQDLDMDYLGLNIRIQIATQTPRLYLYSNYPSE 105 Query: 67 WVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLP 126 W+ YQ +F DP N + S ++W D+L+ EA E A +GLR G TQ L Sbjct: 106 WIERYQRDDFYKQDPAANLSHSSTMPVLWTDELYKEAPQFREMACLYGLRHGWTQSLHDQ 165 Query: 127 NRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKE 186 +S +R + + + +Q L L + + P+ S+RE E Sbjct: 166 QHNESQISVARPNGPIDEVELYDKAGSVQWLCHTLHAVLGEHHLNALCPPQPKMSERELE 225 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +L+W+A GKT+A++A ILS+S++TVNFH +++ K NA NK AA G I Sbjct: 226 VLKWSAAGKTAADVASILSLSQSTVNFHIRSVITKTNAANKAGAIAIAALRGWI 279 >UniRef50_A0KHA7 Transcriptional activator protein AhyR/asaR n=2 Tax=Aeromonas hydrophila RepID=A0KHA7_AERHH Length = 264 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 8/235 (3%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 ++ +F+ + + + ++ +DY+ L + P RP V + P+AWV Y Sbjct: 16 DLIAQFETAADERTIVTLLRELSGRMGFDYFRLALIFPSTIQRPDVIIFNGCPQAWVDTY 75 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWNDDLFSEA------QPLWEAARAHGLRRGVTQYLML 125 + F AIDP++ ++W D + E + + + A +G+ G+T Sbjct: 76 TSSGFFAIDPIVKCAMTKSTPILWADVVNDEERCDEQGREMMQLANEYGICDGITLPWHG 135 Query: 126 PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREK 185 N +G LSF + R + + L A+ R+ + +P S RE Sbjct: 136 ANGHVGLLSFITSTPRTQQQWLSAV-PFISWLSMHIFEAVARVCLAGL-SPHDALSLREL 193 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E+ RW AEGK ++IA IL I+ TV FH N+ K+ A +K+Q +A G++ Sbjct: 194 EVCRWAAEGKQVSDIAQILGITPRTVTFHLNNVVSKLGASSKSQAISWALKQGMV 248 >UniRef50_Q21EX4 Transcriptional regulator, LuxR family n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21EX4_SACD2 Length = 247 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 48/236 (20%), Positives = 88/236 (37%), Gaps = 7/236 (2%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTR-PKVAFYTNYPEAWVSY 70 + E + + + +++Y + P ++ +NYP+ W Sbjct: 8 ELCSALCEATDEETLKELCLKFCELVGFEFYIFGIISSASSLSSPTISTISNYPDEWFKN 67 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEA------QPLWEAARAHGLRRGVTQYLM 124 Y + DPV+ + + W + E + + A GL G++ + Sbjct: 68 YFEEGMQRHDPVVRYCMQNTSAIRWRQLMDLEHYVDAIGEKIMIRASESGLCDGLSIPIK 127 Query: 125 LPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKRE 184 P+ + S + + + Q + L ++ + + + RE Sbjct: 128 APSGEIAIFSLASNREEGLNQRINACLPFAQSFGTQVFECYSALMLKLAQNKQTHLTARE 187 Query: 185 KEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 KE L W EGKT+ EI+ IL +SE TV FH + K+ A N+ A +GLI Sbjct: 188 KESLFWACEGKTTWEISKILDVSERTVIFHLSSATSKLGAVNRQHAVAKAILSGLI 243 >UniRef50_Q13KP8 Transcriptional regulator, LuxR family n=3 Tax=Burkholderia RepID=Q13KP8_BURXL Length = 234 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 60/231 (25%), Positives = 95/231 (41%), Gaps = 4/231 (1%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQA 73 + E + I + ++ + + + Y W Y Sbjct: 1 MAPLLNAADEAEWFGTIAGLVETWGFEKLLIAMLPRPTIRLEDAYVRSTYSPIWRRTYDE 60 Query: 74 KNFLAIDPVLNPENFSQGHLMWNDDLF--SEAQPLWEAARAHGLRRGVTQYLMLPNRALG 131 + + IDP ++ L+W+ D+F + Q ++E ARAHGLR GVT + PN+ G Sbjct: 61 QGLVHIDPTVSHCATRATPLIWSPDIFTTAPQQSMYEEARAHGLRAGVTLPIHGPNQEAG 120 Query: 132 FLSFSRCSAREIPILSDEL--QLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILR 189 + F S + LL + R + T + RE+E L+ Sbjct: 121 MMCFVNDSNPNDEFWQHINVALPNLVLLRDLVIDTSQRHLNTHAQTLLPKLTPRERECLK 180 Query: 190 WTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 WTA GK++ EI+ IL+ SE VNFH KN++ K ++ A A GLI Sbjct: 181 WTARGKSTWEISHILNCSEAVVNFHMKNIRTKFGVNSRRAAAVIATQLGLI 231 >UniRef50_B6R6S8 Transcriptional regulator, LuxR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R6S8_9RHOB Length = 239 Score = 218 bits (557), Expect = 9e-56, Method: Composition-based stats. Identities = 51/234 (21%), Positives = 94/234 (40%), Gaps = 9/234 (3%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 + ET + V I Q + + L + + + W Y Sbjct: 9 EFVESINNEETPDGVSKRIAELGQSFGFTSFCLAAIPEAGASFDGSIMLSGWRPEWQQRY 68 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWN-----DDLFSEAQPLWEAARAHGLRRGVTQYLMLP 126 ++++ DP++ + +W+ +L + AQ + AR +G+ GV + Sbjct: 69 LDRDYVQNDPIVAKARTASRPFLWSSVARDRNLTAAAQQVLSEARDYGMYDGVCVPVHGL 128 Query: 127 NRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKE 186 G L F R L++ + L+ + + L P + RE E Sbjct: 129 QGYQGMLIFGGPEVR----LNEREISVLHLVGIYASNKVRELVGANTNRPRHRLTPRELE 184 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L+W+A GKTS EI+ IL+IS++T +++ + +K++A N+T GLI Sbjct: 185 CLKWSAAGKTSWEISQILNISQHTADWYLASAARKLHAANRTHAVAEGFRLGLI 238 >UniRef50_C5B507 LuxR type transcriptional regulator n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B507_METEA Length = 242 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 91/244 (37%), Gaps = 9/244 (3%) Query: 2 QDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYT 61 D + + ++V H +E + ++++ + +V Sbjct: 1 MYDDCAARALDFVEGLDDCHDHDQVAHSVERILAEFGFEHFVITGLPNPNDRLDQVLLIR 60 Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLF-----SEAQPLWEAARAHGLR 116 P W +Y N++ +DPV + W + + A + + A G+ Sbjct: 61 RLPAGWFEHYARHNYMYLDPVFRNCRATTSPFDWGEAPYDPETEPGAIEVMQRATDFGMA 120 Query: 117 RGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTP 176 RG + + P S S + P L+ + + ++ + ++ P Sbjct: 121 RGFSVPIHGPEGCEACFSMSGRN----PDLTGRTKPAVHMIAMYAFERARQVGRRPAKPP 176 Query: 177 EMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAA 236 ++RE+E+L W A GK+S + A I+ I+E T H N K+ A N+TQ A Sbjct: 177 SNPLTQREQEVLTWAALGKSSRDTAEIMQITERTALAHAVNATHKLGAANRTQAVVRAMQ 236 Query: 237 TGLI 240 + I Sbjct: 237 SKFI 240 >UniRef50_Q9ANB1 ID375 n=2 Tax=Bradyrhizobium japonicum RepID=Q9ANB1_BRAJA Length = 261 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 52/239 (21%), Positives = 97/239 (40%), Gaps = 12/239 (5%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVR-----HPVPFTRPKVAFYTNYPEA 66 + + + + ++ + A +D + +P P N+P Sbjct: 25 SFIECAIQTRSIAALFDLLVNFASNEGFDKVAYGALSCSNERRLPEYLPPPPTI-NFPSD 83 Query: 67 WVSYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQ 121 W Y + + AIDPV+ +W++ +L + A+ GL+ G++ Sbjct: 84 WCQRYAEQEYQAIDPVVRRTAMLPRPFLWDELTSRYELQPRELRVLREAKEAGLKHGMSV 143 Query: 122 YLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFS 181 L F+SF+ P + ++ + DE T ++ + Sbjct: 144 PLFGSQGRSAFVSFASPFDDADPQDRMAHLTTLASAFHNAVAQITPPLDESCET-DIPLT 202 Query: 182 KREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 RE E L W AEGK++ I ++++++NTVNFH KN+ +K+ A N+T A G+I Sbjct: 203 PRETECLYWVAEGKSAWVIGQLVNVTDNTVNFHMKNVIRKLGAANRTNAVAKATRRGII 261 >UniRef50_P25084 Transcriptional activator protein lasR n=10 Tax=Pseudomonas RepID=LASR_PSEAE Length = 239 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 59/229 (25%), Positives = 95/229 (41%), Gaps = 4/229 (1%) Query: 16 RFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKN 75 +R E ++ A L + + NYP AW +Y Sbjct: 9 ELERSSGKLEWSAILQKMASDLGFSKILFGLLPKDSQDYENAFIVGNYPAAWREHYDRAG 68 Query: 76 FLAIDPVLNPENFSQGHLMWNDDL--FSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFL 133 + +DP ++ S + W + + +E A A GL G+T L LG L Sbjct: 69 YARVDPTVSHCTQSVLPIFWEPSIYQTRKQHEFFEEASAAGLVYGLTMPLHGARGELGAL 128 Query: 134 SFS--RCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWT 191 S S + E + + + +L +L + L E ++ + + REKE+L+W Sbjct: 129 SLSVEAENRAEANRFMESVLPTLWMLKDYALQSGAGLAFEHPVSKPVVLTSREKEVLQWC 188 Query: 192 AEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 A GKTS EI++I + SE VNFH N+++K ++ A A GLI Sbjct: 189 AIGKTSWEISVICNCSEANVNFHMGNIRRKFGVTSRRVAAIMAVNLGLI 237 >UniRef50_Q2RNV6 Transcriptional regulator, LuxR family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RNV6_RHORT Length = 260 Score = 213 bits (543), Expect = 3e-54, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 90/249 (36%), Gaps = 10/249 (4%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 M + L + ++ + +L + + V Sbjct: 1 MMSGGD-DILGSFLEALNGTSDSADLTTLLTGTFARLGFPHSCYHVVRLEGAGARLPYVL 59 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFS-----EAQPLWEAARAHGL 115 NY ++W +Y + FL IDPVL Q +W++ + + + ++ AR GL Sbjct: 60 HNYKDSWSEHYFREGFLEIDPVLATCPDRQLPFLWSEAIAPESLSHDQRRMFSDARDAGL 119 Query: 116 RRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRL----NDE 171 G + + + ++ + Q + L+ R Sbjct: 120 HDGYSVPIRGSHGEFATVTVIPEQGGDAARRLIGEQKHLVHLLALYFDRHARSTVINARL 179 Query: 172 IVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVA 231 + S RE+E+LRW A GKTS EIA I IS +V FH N +KK+ +KT Sbjct: 180 SSRRRKTVLSPREQEMLRWAALGKTSWEIAEIAGISTKSVEFHLDNAKKKLGTYSKTHAV 239 Query: 232 CYAAATGLI 240 A GL+ Sbjct: 240 VKALTLGLV 248 >UniRef50_C5ANM9 DNA-binding HTH domain-containing protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5ANM9_BURGB Length = 235 Score = 213 bits (543), Expect = 4e-54, Method: Composition-based stats. Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 1/230 (0%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 + +++ V+ ++ A QL +DY R P+P V + NYP W+ +Y Sbjct: 6 DVAHDICSSDSSRVVFDKLVGYASQLGFDYCCYGFRSPLPVGGESVKVFDNYPNGWMEHY 65 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALG 131 + ++ +DP + + W S+ W+ AR HGL+ G+ Q A G Sbjct: 66 RHMGYIDVDPTVEKAMTCSQTICWPGFDESKQSAFWQDARDHGLKVGIAQPSWSARGAFG 125 Query: 132 FLSFSRCSAREIPILSDELQLKMQLLVRESLMALM-RLNDEIVMTPEMNFSKREKEILRW 190 LS +R L L++ + A+ + D + + ++ ++RE+++LRW Sbjct: 126 LLSLARGEGEIDGHELKRLSLQLSWITNAVHSAMTAHVFDSLGLGAAISLTERERQVLRW 185 Query: 191 TAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 T EG + +I+ L+IS +TVN+H + K A NK Q A A A L+ Sbjct: 186 TVEGLNAFDISEKLNISVSTVNWHIGKVLAKFGATNKVQAAARAVALNLL 235 >UniRef50_P0A3J5 Transcriptional activator protein ahyR/asaR n=89 Tax=Bacteria RepID=AHYR_AERHY Length = 260 Score = 213 bits (542), Expect = 6e-54, Method: Composition-based stats. Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 9/237 (3%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 L F + + + I + YDYY + P+ RPKV + P++WV Y Sbjct: 8 EYLEHFTSVTDGDRLAELIGRFTLGMGYDYYRFALIIPMSMQRPKVVLFNQCPDSWVQAY 67 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWNDDLFSE------AQPLWEAARAHGLRRGVTQYLML 125 A + LA DP++ + WN + + A GLR G++ L Sbjct: 68 TANHMLACDPIIQLARKQTLPIYWNRLDERARFLQEGSLDVMGLAAEFGLRNGISFPLHG 127 Query: 126 PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT--PEMNFSKR 183 G LSF +L E + + A +R+ + P+ + R Sbjct: 128 AAGENGILSFITAERASSDLLL-ESSPILSWMSNYIFEAAIRIVRVSLREDDPQEALTDR 186 Query: 184 EKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E E L W +EGKTS EIA IL I+E TVN+H + +K + N+ Q ++G++ Sbjct: 187 ETECLFWASEGKTSGEIACILGITERTVNYHLNQVTRKTGSMNRYQAIAKGVSSGIL 243 >UniRef50_C3K2E5 Putative LuxR-family regulatory protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K2E5_PSEFS Length = 236 Score = 212 bits (541), Expect = 6e-54, Method: Composition-based stats. Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 1/234 (0%) Query: 7 FSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEA 66 +WR T L + + V+ + Q +L + Y S + V + +TNYP+ Sbjct: 2 LNWRNTRLPKLEGENEITSVFEMVINQTYELGFQYCSFKMSSQVSENQTNPIEFTNYPKE 61 Query: 67 WVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLP 126 W + Y + +DPV+ ++W LF +A LW A+ + TQ + Sbjct: 62 WTTVYNQARYFDVDPVVKHCKRCVLPVVWEGTLFKDAPSLWSLAQTLNVNVAWTQAVHDF 121 Query: 127 NRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRL-NDEIVMTPEMNFSKREK 185 L+ SR + P+ E + L + + + P + RE Sbjct: 122 QGVFSMLTLSRGTDDVSPVELYEKAGHVLWLCHAMHAVVAQKYAGKPSALPPSKLTPRET 181 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 EIL+W+A GKT+++IA IL +SE TV FH + KK+ NK A+ GL Sbjct: 182 EILKWSAMGKTASDIATILCLSERTVGFHISSTFKKLGVNNKIAAVLCASKAGL 235 >UniRef50_P55629 Putative HTH-type transcriptional regulator y4qH n=4 Tax=Rhizobiales RepID=Y4QH_RHISN Length = 326 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 103/246 (41%), Gaps = 12/246 (4%) Query: 4 KDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVA----F 59 ++ +L + ++++ + A + + + +V Sbjct: 82 DEYVVELGRLLDLTDGVAQPKKLFDLLSAFAFKFGCKWLAYGPLTSDHKALNRVKCDSEE 141 Query: 60 YTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSE-----AQPLWEAARAHG 114 NYP+ W + I PV+ G + W+D + +++ A G Sbjct: 142 ILNYPDGWRERCLEMGYETIAPVIKESRMGAGPIRWSDMYSDASTTEYERRMFDEAAMFG 201 Query: 115 LRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVM 174 LR G+T L P + +SF+R RE D +QL + + ++ + + Sbjct: 202 LRSGITVPLRGPRGSCAIMSFARHCERE---FHDRTIAYLQLAATHFHLRVAKIANLNAV 258 Query: 175 TPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 S REKE + W A GK+S +I +I+ ISENTVNFH KN+ +K+ ++T A A Sbjct: 259 QKIPALSLREKECVLWVARGKSSWDIGVIMRISENTVNFHIKNVMRKLGTSSRTVAAIKA 318 Query: 235 AATGLI 240 + G+I Sbjct: 319 ISLGII 324 >UniRef50_B1M2Q8 Transcriptional regulator, LuxR family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2Q8_METRJ Length = 242 Score = 210 bits (535), Expect = 3e-53, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 94/245 (38%), Gaps = 9/245 (3%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKV--- 57 M ++L +R T +E+ + + Y + + + Sbjct: 1 MPHSKHLDRTFSVLRDLERAATPDEIARLLVEAFSRYGVSYIMAGIVPDPGLPKRRHAGF 60 Query: 58 AFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDL--FSEAQPLWEAARAHGL 115 + PE W Y + + DP + + WN L A + A G+ Sbjct: 61 VLASTMPEGWARRYVTQGYALHDPTVRRLCTTATPFDWNAVLPDTPTAGRVMNEAGEFGI 120 Query: 116 RRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT 175 R G+T + + G +S S P ++ + L+ ++ L+ +N Sbjct: 121 RAGITVPFVTLDGEPGGISVSGERIEIDP----AERVAVNLVATYAVGQLLLMNSRPAAP 176 Query: 176 PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 S RE+E L+W AEGKT EI M++ I+ V++H ++ + K++ N+ A Sbjct: 177 APARLSPREREALQWAAEGKTDVEIGMVMGITAAGVDYHLRSARAKLDTVNRAHTVAQAL 236 Query: 236 ATGLI 240 +GLI Sbjct: 237 RSGLI 241 >UniRef50_B2UGC8 Transcriptional regulator, LuxR family n=1 Tax=Ralstonia pickettii 12J RepID=B2UGC8_RALPJ Length = 253 Score = 210 bits (534), Expect = 4e-53, Method: Composition-based stats. Identities = 67/243 (27%), Positives = 100/243 (41%), Gaps = 17/243 (6%) Query: 15 LRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVA---------------F 59 + E+ +E A L Y + R Sbjct: 9 EGLLTAGSHAEIAAFMERHAGNLGYGRFFYSPLLVAGDARHFFKDDHNVVAAEMLYTKNI 68 Query: 60 YTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQ-PLWEAARAHGLRRG 118 ++ YP +W+ YQ +A DPV+ S + W+ D A+ P+++ AR HGL G Sbjct: 69 FSTYPASWIRRYQEAGHVAADPVVKLITTSNLPIHWDADDLQAARSPVFDEAREHGLATG 128 Query: 119 VTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLL-VRESLMALMRLNDEIVMTPE 177 +T + + S + A E + + +L A+ RL+ + P Sbjct: 129 ITIPINGFDHTRALFSVTSDQAPERSQRHTDAISGLAVLTALHLHEAVRRLDASMSNAPI 188 Query: 178 MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAAT 237 + + REKE L+W A GKTS EIA ILS+SE TV FH N KK+ A N+ Q A + Sbjct: 189 PSLTSREKECLQWAAAGKTSWEIARILSVSERTVIFHIGNATKKLGATNRRQAVARAISL 248 Query: 238 GLI 240 LI Sbjct: 249 RLI 251 >UniRef50_B1Z7Q1 Transcriptional regulator, LuxR family n=3 Tax=Methylobacterium RepID=B1Z7Q1_METPB Length = 243 Score = 210 bits (534), Expect = 4e-53, Method: Composition-based stats. Identities = 54/247 (21%), Positives = 93/247 (37%), Gaps = 13/247 (5%) Query: 2 QDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHP---VPFTRPKVA 58 + +L R + E++ I + + +Y + T+ Sbjct: 1 MSRKSLDLTLEILKSLDRAHSREDILRAIMPRLNAMGIEYVISAMIPQKRLPARTQKNFV 60 Query: 59 FYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDL-----FSEAQPLWEAARAH 113 N + W Y +K ++ DP++ S W++ +A+ + A Sbjct: 61 ILENTSDEWNRLYFSKGYMYFDPIVQATLSSTTGFRWSETDPAGLQDPKARQVMNEAVEF 120 Query: 114 GLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIV 173 GL G T L G L+F+ P Q M L+ ++ L D Sbjct: 121 GLGDGFTVPLATLEEERGGLTFAGRQLDISPG-----QRGMLTLIASYVVGQTLLIDNGP 175 Query: 174 MTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 M + RE+E L+W AEGKT EI ++ IS + V+FH ++ + K+ ++TQ Sbjct: 176 SERRMGLTPRERESLQWVAEGKTDWEIGELMGISRHGVDFHLRSARVKLGCVSRTQAVAE 235 Query: 234 AAATGLI 240 GLI Sbjct: 236 GFRRGLI 242 >UniRef50_B3Q959 Transcriptional regulator, LuxR family n=7 Tax=Bradyrhizobiaceae RepID=B3Q959_RHOPT Length = 243 Score = 209 bits (533), Expect = 5e-53, Method: Composition-based stats. Identities = 62/248 (25%), Positives = 99/248 (39%), Gaps = 15/248 (6%) Query: 1 MQDKDFFSWRR---TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKV 57 M + W R + +R+E + E + Y + P++ Sbjct: 1 MIVGEDQLWGRRALEFVDSVERLEAP-ALISRFESLIASCGFTAYIMAGLPSRNAGLPEL 59 Query: 58 AFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQ-----PLWEAARA 112 +P W Y ++NF A+DPV + +W+D + + + A Sbjct: 60 TLANGWPRDWFDLYVSENFSAVDPVPRHGATTVYPFVWSDAPYDRDRDPAAHRVMTRAAE 119 Query: 113 HGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEI 172 GL G L + S + A + P LS + MQL+ + L L+ Sbjct: 120 FGLVEGYCIPLHYDDG-----SAAISMAGKDPDLSPAARGAMQLVSIYAHSRLRALS-RP 173 Query: 173 VMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVAC 232 + RE EIL+W A+GKT+ EI++IL I+E TV FH +K++A N+T Sbjct: 174 KPIRRNRLTPRECEILQWAAQGKTAWEISVILCITERTVKFHLIEAARKLDAANRTAAVA 233 Query: 233 YAAATGLI 240 A GLI Sbjct: 234 KALTLGLI 241 >UniRef50_Q15YZ8 Transcriptional regulator, LuxR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15YZ8_PSEA6 Length = 248 Score = 209 bits (533), Expect = 6e-53, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 102/247 (41%), Gaps = 11/247 (4%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 MQ ++F+ +L + + + E Q ++ +Y L V P + Sbjct: 2 MQVEEFY----ELLESVDESSSIDALKETCERFCQLIDIPFYLLGVIGQTSSYSPTIRVI 57 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWN------DDLFSEAQPLWEAARAHG 114 +NYPE W+ +Y ++ DPV+ Q + W+ D ++ ++E A A+G Sbjct: 58 SNYPEKWLEFYFKESEQQNDPVVKYIFEKQSPIRWDKLVEYQDFSSTKGLLVFEKAAAYG 117 Query: 115 LRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIV- 173 L G++ + + + S + + + D Q+ + L Sbjct: 118 LYNGLSIPIRSTSENIAVFSVAIDERSDANRVLDNAQMFCHTFATHLFERYVLLEISASD 177 Query: 174 MTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 T +KRE E L W EGKT+ EI+ I+++SE TV FH N K+ A N+ Sbjct: 178 ETDRRELTKRELECLFWACEGKTAWEISQIINVSERTVLFHLGNSNTKLGAINRQHAVAL 237 Query: 234 AAATGLI 240 A G+I Sbjct: 238 AIKKGII 244 >UniRef50_B1VJE7 VR protein n=2 Tax=Pseudomonas fuscovaginae RepID=B1VJE7_9PSED Length = 239 Score = 209 bits (532), Expect = 7e-53, Method: Composition-based stats. Identities = 57/238 (23%), Positives = 96/238 (40%), Gaps = 5/238 (2%) Query: 7 FSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEA 66 + A + + L Q+L Y ++ +N+P+A Sbjct: 1 MLLMDECIE-LLSAMDARTWFQSLVLSVQKLGYSQVLYALKPNKEAQNSTARIMSNFPDA 59 Query: 67 WVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDL--FSEAQPLWEAARAHGLRRGVTQYLM 124 W Y +N+ +IDPV++ S ++W D L + E AR GL G+T + Sbjct: 60 WRDLYDNENYSSIDPVVSHSFSSSLPILWEDKLYKTRREKEFAEDARRAGLSHGLTLPIH 119 Query: 125 LPNRALGFLSF--SRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSK 182 P +G LS + E + +L ++ + L + + + Sbjct: 120 GPQGQVGMLSLSCAPMPQNEYLQVLQHSIAAASMLRDYAVTSGSSLFLHNSSSTAPHLTP 179 Query: 183 REKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 RE EIL W KT+ EI ILS++E TV FH KN+++K+N ++ A L+ Sbjct: 180 RELEILHWAWAEKTTWEIGKILSLAEPTVEFHFKNIRRKLNVSSRRLAVARAIQLDLM 237 >UniRef50_A0AX00 Transcriptional regulator, LuxR family n=6 Tax=Burkholderia RepID=A0AX00_BURCH Length = 237 Score = 209 bits (532), Expect = 7e-53, Method: Composition-based stats. Identities = 66/229 (28%), Positives = 96/229 (41%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 QR TAE + I A L + Y +R +P RP + N+P W Y Sbjct: 8 DCFDALQRAPTAEAAFPPIAAAAAALGFRYCVYGLRRTLPLARPDLQIVGNHPREWEHRY 67 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALG 131 ++ IDP++ ++WN W A G+R G + LG Sbjct: 68 VKFGYVTIDPIIKRVASQPRPVVWNAFDEPGDTAFWHDAACFGMRYGWSHGGYDRAGNLG 127 Query: 132 FLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWT 191 L+ R + L+ L + LM + + + RE+E+L WT Sbjct: 128 VLTLVRDTTPLDADEISRLRAPCASLAHAAHAYLMPRLADPIAPVGTGLTLREREVLAWT 187 Query: 192 AEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 A+GKT+ EI MI I+E TV FH +N K++A NKT A AA GL+ Sbjct: 188 ADGKTAYEIGMIFGIAERTVKFHLQNAVVKLDAMNKTHAATKAAMLGLL 236 >UniRef50_B9K1Q2 DNA-binding HTH domain-containing protein n=1 Tax=Agrobacterium vitis S4 RepID=B9K1Q2_AGRVS Length = 307 Score = 208 bits (531), Expect = 9e-53, Method: Composition-based stats. Identities = 62/256 (24%), Positives = 105/256 (41%), Gaps = 19/256 (7%) Query: 1 MQDKDF--FSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPV----PFTR 54 M D ++R +A E+ +E + L Y Y+S + Sbjct: 34 MHDIKHKTVDPLDRFIMRLNAAVSAAEMKAVMESSIKSLGYKYFSYHILQTPVLNATNET 93 Query: 55 PKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDD-----LFSEAQPLWEA 109 NYPE WV Y ++ ++ DP++ + W+D L E + + E Sbjct: 94 RHTFGINNYPEEWVERYASERYVYCDPIVGISLSRKTPFRWSDAIDSDKLTEEERCVIED 153 Query: 110 ARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLN 169 A G+ G+T LM + L ++ + E L + ++ + + + Sbjct: 154 AAKRGIVNGLTVPLMSRHGELAIMTVI--PDEKFQDSLPEAHL-IHIISQFFHSCALPVV 210 Query: 170 DEI-----VMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINA 224 E S REKE + W ++GK+S EIA IL ISE +V F+ +++++K+ A Sbjct: 211 MEEHLIGSYRRRRSFLSAREKETVIWVSKGKSSWEIAKILGISEKSVEFYMESVKRKLEA 270 Query: 225 PNKTQVACYAAATGLI 240 N+TQ A GLI Sbjct: 271 VNRTQAVVKAIMLGLI 286 >UniRef50_Q3SUZ7 Transcriptional regulatory protein, LuxR family n=6 Tax=Bradyrhizobiaceae RepID=Q3SUZ7_NITWN Length = 241 Score = 208 bits (531), Expect = 9e-53, Method: Composition-based stats. Identities = 55/247 (22%), Positives = 99/247 (40%), Gaps = 15/247 (6%) Query: 2 QDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVA--- 58 + T + R + T E+ + A+ L + + + T + Sbjct: 1 MSRRTLDDTLTFIARVDKASTPAEIADAVVDVARPLGFSHVLAGIIPIPGMTAEQQISNV 60 Query: 59 FYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAH 113 +P+AW Y K +L DP + N S +W++ + AR Sbjct: 61 VLHRWPKAWSERYFTKGYLFDDPTIQRVNTSTEPFLWSELEPTYRNTPAPTRVMGEAREF 120 Query: 114 GLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIV 173 L G T ++ N S + A + L+ ++QL+ + + + Sbjct: 121 NLGCGFTVPMITLNGQTAGFSLASERAE----VPSILRGQLQLIAMYAFARALGQKYKPA 176 Query: 174 MTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 +N + RE +IL+W AEGK+ EI++IL +SE+ V+ + ++ K+NA N+TQ Sbjct: 177 P---VNLTPREMDILQWMAEGKSDWEISVILKVSEHLVDKIARQLRAKLNATNRTQTVAV 233 Query: 234 AAATGLI 240 A LI Sbjct: 234 ALRHNLI 240 >UniRef50_B7T9X0 LuxR family transcriptional regulator n=2 Tax=Bacteria RepID=B7T9X0_9PROT Length = 246 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 53/230 (23%), Positives = 99/230 (43%), Gaps = 2/230 (0%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQ 72 ++ ++ ++ A +++ + PF P + YP+++ Y+ Sbjct: 16 LIASVIEATDEADLLKRMQAAAVASGFEHVLFGIELRRPFLDPIQHITSGYPDSYQEIYR 75 Query: 73 AKNFLAIDPVLNPENFSQGHLMWNDDLF-SEAQPLWEAARAHGLRRGVTQYLMLPNRALG 131 K F++ DP + L+W +D++ +++ + E + +GL G + + + Sbjct: 76 TKGFISRDPSVAYCQTHTKPLIWGEDMYLADSYEIMEESTKYGLSHGFSVPVRDGPHVVS 135 Query: 132 FLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTP-EMNFSKREKEILRW 190 LS +R E + +L +A + V T S+RE E L+W Sbjct: 136 MLSLARDKPFESAAEKKLVVDAGMVLANCVHVASKNIIVPDVETTLRPKLSRREHECLKW 195 Query: 191 TAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 AEGK++ I+ +L ISE TV FH +N+ K+N + Q A GLI Sbjct: 196 IAEGKSNGVISDLLKISEPTVEFHIRNLFTKLNVATRVQAAVVGVLMGLI 245 >UniRef50_Q3Y8H6 PpuR n=3 Tax=Pseudomonas putida RepID=Q3Y8H6_PSEPU Length = 238 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 64/233 (27%), Positives = 114/233 (48%), Gaps = 4/233 (1%) Query: 10 RRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVS 69 +L R ME E+ +++ ++L Y + + ++ +V Y++YP+AW + Sbjct: 6 MDELL-RLSEMERFEDWLAHLKILTRKLGYSNFLIGLKPAPTDANQQVLIYSDYPDAWRT 64 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWNDD--LFSEAQPLWEAARAHGLRRGVTQYLMLPN 127 Y A+++ A+DPV+ + L+W+ D +E A AHGL++G+ L P Sbjct: 65 RYDAESYAAVDPVVQHCLNANRPLLWDRDNYRRPSESEFFEEAAAHGLQQGLALPLHGPR 124 Query: 128 RALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEI 187 G L + + L M L+R+ M M L I + ++ + REKE+ Sbjct: 125 GEAGMLCLKPFESGPRATATMIESLPMATLLRDYAMEGM-LKARIECSTPVHLTSREKEV 183 Query: 188 LRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L+W+A GKT+ EI+MILS + + ++FH KN+++K ++ A I Sbjct: 184 LQWSAAGKTTWEISMILSCTTSAIDFHFKNIRRKFQVSSRQMAVLKAIQQKSI 236 >UniRef50_Q2T3H4 Autoinducer-binding transcriptional regulator, LuxR family n=29 Tax=pseudomallei group RepID=Q2T3H4_BURTA Length = 425 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 63/230 (27%), Positives = 103/230 (44%), Gaps = 6/230 (2%) Query: 15 LRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAK 74 + ++ + +QL + ++ RH + +P W Y A Sbjct: 198 NEILSATCKKSLFEQTAYHVRQLGFKNFAY--RHQISGAASSRCMLDGFPTEWRLRYDAA 255 Query: 75 NFLAIDPVLNPENFSQGHLMWNDDL--FSEAQPLWEAARAHGLRRGVTQYLMLPNRALGF 132 ++L+IDPV+ L+W+D+L A+ + + A+++GL G++ + + A+ Sbjct: 256 DYLSIDPVVQHCRCRTVPLIWHDELYTTGRAKLMRDEAKSYGLVYGLSCPVHDRSGAISM 315 Query: 133 LSFSRCSAREIPI-LSDELQLKMQLLVRESLMALMRLNDEIVMTPEM-NFSKREKEILRW 190 LS + E L QLL A+ L D + + + RE+E L+W Sbjct: 316 LSMATDDPFEHDANDILRLLSLSQLLASFVHAAMHELLDCRLRRQGSCDLTARERESLQW 375 Query: 191 TAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 GKT+ EI+ IL ISE TV FH N +KI A N+ Q A+A GLI Sbjct: 376 AGRGKTAWEISKILGISERTVVFHLSNAARKIGANNRAQAVVIASARGLI 425 >UniRef50_B0ZTC2 Transcriptional regulator n=4 Tax=Mesorhizobium RepID=B0ZTC2_9RHIZ Length = 243 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 92/243 (37%), Gaps = 13/243 (5%) Query: 7 FSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRH---PVPFTRPKVAFYTNY 63 F + + Q TA V ++ + + ++ Sbjct: 4 FDRTLEYIDQLQHAGTAAAVCEKLLGITSDFGLTALMAGTVPQPGTPSGQQKQHVLLCDW 63 Query: 64 PEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDD-----LFSEAQPLWEAARAHGLRRG 118 P W+ Y A+N++ DPV++ Q W + + + A A LR G Sbjct: 64 PVEWLERYVARNYVDHDPVVSHMKQLQAPFQWREAAQGISFDKSSDEVMGDAGAFKLRDG 123 Query: 119 VTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT-PE 177 + L+ + + +S E LS + L+ ++ M+++ T Sbjct: 124 LAFPLITLDGQIVMVSL----GGEAVQLSGAEFGLVSLVSTYAVGRAMQIHTMATSTIDH 179 Query: 178 MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAAT 237 + + RE+E L+W A GK+ EI+ IL ISE+T H N + K+ A N+ Q A Sbjct: 180 IELTPRERECLQWAAVGKSEWEISQILGISEHTSEKHLLNAKSKLGAVNRVQAVAEAIRR 239 Query: 238 GLI 240 G I Sbjct: 240 GYI 242 >UniRef50_C5V7F6 Transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V7F6_9PROT Length = 243 Score = 207 bits (526), Expect = 4e-52, Method: Composition-based stats. Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 10/238 (4%) Query: 13 MLLRFQ---RMETAEEVYHEIELQAQQLEYD--YYSLCVRHPVPFTRPKVAFYTNYPEAW 67 + RF + E + + L Y+ ++ P +NY W Sbjct: 3 FIERFSDLISCSSQEIWRNRVFKLGCDLGYEQTRLAILPDPRAPIEAEHAFQQSNYSADW 62 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQ--PLWEAARAHGLRRGVTQYLML 125 ++ Y A+ +DP + L+W+ +FS + ++E A +G++ GVT + Sbjct: 63 LNKYTAEKLHHVDPTFSHCISKSTPLIWSPKIFSAQKQKEMYEEACGYGVKSGVTLPIHG 122 Query: 126 PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESL---MALMRLNDEIVMTPEMNFSK 182 LG + F + + D +L +L + + ++ + Sbjct: 123 AKGELGIVCFVSDTKPDKRFHRDANHHLPELACFRDFILESSLQFMKPSRQVENPISVTH 182 Query: 183 REKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 RE E L+W+A GK+S EI IL+ +E TVNFH N+++K + ++ Q A + GLI Sbjct: 183 RELECLKWSASGKSSWEIGHILNCTEATVNFHFSNIRRKFSTTSRQQAIVKAISLGLI 240 >UniRef50_Q07P69 Transcriptional regulator, LuxR family n=2 Tax=Bradyrhizobiaceae RepID=Q07P69_RHOP5 Length = 246 Score = 206 bits (525), Expect = 5e-52, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 82/243 (33%), Gaps = 10/243 (4%) Query: 3 DKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTN 62 D+ T + + T IE ++ + + ++ Sbjct: 7 TGDYGKDALTFVEELSTLTTISAAIDFIEKGFCAYGFETIIVTGIPNHKQSFSQMVMAKR 66 Query: 63 YPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLF-----SEAQPLWEAARAHGLRR 117 +P+ W Y N+ DPV+ S W+D + A + + A + R Sbjct: 67 WPDEWFKLYTQNNYHRDDPVVRHLRKSFNPFEWSDAPYSRRNEPRAAAVMDRAADFRMSR 126 Query: 118 GVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPE 177 G + +S + L+ + + L+ + + L Sbjct: 127 GFIVPVHGLAGYEAAVSL----GGDHIDLNPRSKPALHLMAMYAFDRIRSLV-SPANDAP 181 Query: 178 MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAAT 237 + RE E L WTA+GK++ EI IL I++ T H +K+ A NKT A Sbjct: 182 PRLTHRECETLNWTAQGKSAWEIGEILQIAQRTAEEHLATAARKLGAVNKTHAVAIAIRQ 241 Query: 238 GLI 240 LI Sbjct: 242 KLI 244 >UniRef50_Q2T747 Transcriptional regulator, LuxR family n=26 Tax=pseudomallei group RepID=Q2T747_BURTA Length = 230 Score = 206 bits (524), Expect = 6e-52, Method: Composition-based stats. Identities = 56/230 (24%), Positives = 91/230 (39%), Gaps = 5/230 (2%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQ 72 + + A Q+ Y ++++ +YP WV +Y Sbjct: 2 LCATLPESRDVRTLIETFRQAALQIGYQHHAIVELSGTSHPASIDVVSLHYPSEWVEHYT 61 Query: 73 AKNFLAIDPVLNPENFSQGHLMWNDDLFS--EAQPLWEAARAHGLRRGVTQYLMLPNRAL 130 ++ IDPV WND S + L A GL G++ L P + Sbjct: 62 RNDYFTIDPVHRAAFRYSTPFPWNDIATSNLRERHLLMEAEDAGLDNGISIPLHQPLGRV 121 Query: 131 GFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRW 190 +S S + +D LL + + L + + P ++ + RE+ L W Sbjct: 122 LLVSLSGTAP---THDADAKWRNAYLLGMQFNLQLQSMRTCRPIPPSVHLTDREQMCLTW 178 Query: 191 TAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 A GK+S IA +L IS+ TV+FH +N +K+N ++T A A GLI Sbjct: 179 VARGKSSWVIANMLDISKYTVDFHIENAMEKLNTRSRTFAAVKATRQGLI 228 >UniRef50_B0U8W7 Transcriptional regulator, LuxR family n=4 Tax=Methylobacterium RepID=B0U8W7_METS4 Length = 245 Score = 206 bits (524), Expect = 6e-52, Method: Composition-based stats. Identities = 57/248 (22%), Positives = 97/248 (39%), Gaps = 12/248 (4%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLC---VRHPVPFTRPKV 57 M K R +L R T E V ++ + ++ L + VP R Sbjct: 1 MMSKRSLDLAREVLQAIHRTATPENVRDQLLRTLAGVGVEHVLLATLRICDAVPCDRRPT 60 Query: 58 AFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDD-----LFSEAQPLWEAARA 112 F YP+ W Y A++++ DPV+ W+D A+ + + A Sbjct: 61 VFAGTYPDEWARRYYARDYILHDPVVRGVGERGSGFAWSDPGLCAPDDRAARRVLDEAGE 120 Query: 113 HGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEI 172 GLR G T L+ +SF E LS ++ + L+ +L ++ L Sbjct: 121 FGLREGFTLPLLTLEGDTAGVSFVG----EKLDLSPAVRGMLTLVGTYALGQVLLLAKGE 176 Query: 173 VMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVAC 232 S RE+E L+W A+GK+ EIA + IS + H + +++K+ ++ Sbjct: 177 TGPLAEPLSPRERESLQWAADGKSDQEIADAMGISAHGAIRHLRAVRRKLGTTSRAHAVA 236 Query: 233 YAAATGLI 240 G+I Sbjct: 237 LGLRLGII 244 >UniRef50_B8I9S3 Transcriptional regulator, LuxR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8I9S3_METNO Length = 246 Score = 205 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 57/248 (22%), Positives = 94/248 (37%), Gaps = 12/248 (4%) Query: 1 MQDKDFFSWRRTM--LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVA 58 M + F R T + + E I Q + + +++ Sbjct: 1 MSGMEDFFLRETFALIDALDEVRDPFEAQTRIFEHIQHVGFTSFTITRLPRPSDRLGPNM 60 Query: 59 FYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFS-----EAQPLWEAARAH 113 + +P+ W+++Y DPV+ + W++ F A+ + + A A Sbjct: 61 LFNMWPKDWLTHYDRVGHYRFDPVVRQCYRTTEPFAWSEVPFDADQPDRARRVMDEAAAF 120 Query: 114 GLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRL-NDEI 172 GL G + G +S + E LS +++ + +L + A R D Sbjct: 121 GLGFGFCIPVHDALGFQGGVSLAG----ERIDLSPKIRRGLHMLGLYAWGAATRTTEDRR 176 Query: 173 VMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVAC 232 P S RE+++L W A G+T EIA IL +S TV H K+ + KI A N TQ Sbjct: 177 RSEPGRLLSARERDVLSWAAMGRTREEIATILGVSHETVATHLKSARIKIGARNTTQTVV 236 Query: 233 YAAATGLI 240 A I Sbjct: 237 EALRKREI 244 >UniRef50_B5A461 Quorum sensing regulator n=1 Tax=Mesorhizobium tianshanense RepID=B5A461_9RHIZ Length = 275 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 53/233 (22%), Positives = 95/233 (40%), Gaps = 8/233 (3%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSL--CVRHPVPFTRPKVAFYTNYPEAWVSYY 71 L ++ AE++ ++ A++ + R + YP WV Y Sbjct: 41 LEEIGQLGDAEKIPALLQRIAERYGLKTVAYLGTGTLDRRVPRQEPFIAVTYPPEWVERY 100 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWNDDLFSEA--QPLWEAARAHGLR-RGVTQYLMLPNR 128 +A+ ++ IDP + + W++ +E + + A GL RG++ + Sbjct: 101 RARGYINIDPAIQIGLRRLLPIDWDEFGKAEGDLRQFFGEASEFGLGLRGISFPVHGCGG 160 Query: 129 ALGFLSF-SRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEI 187 S + S RE ++ A++R + P S RE E Sbjct: 161 DRALFSVTADFSKREWHWARRTAFRHFPIIAAHLHEAVLRTDGVFRSQP--RLSPRELEC 218 Query: 188 LRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 LRWT+EGKT E +IL +S +TV + ++ + K+ A + T A A +GL+ Sbjct: 219 LRWTSEGKTVWECGVILGLSPHTVRCYLESARHKLGASSNTHAASLATKSGLL 271 >UniRef50_A1TTR7 Transcriptional regulator, LuxR family n=3 Tax=Acidovorax citrulli RepID=A1TTR7_ACIAC Length = 242 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 60/237 (25%), Positives = 92/237 (38%), Gaps = 8/237 (3%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRH-----PVPFTRPKVAFYTNYPE 65 R + R + T E+ E L Y ++SLC P NYP Sbjct: 4 RDFIQRANQALTQTELLACFEQAVLLLGYQHFSLCYVQLRQDGSGTSQPPIGVLSHNYPS 63 Query: 66 AWVSYYQAKNFLAIDPVLNPENFSQGHLMWND--DLFSEAQPLWEAARAHGLRRGVTQYL 123 WVS+Y A+N+ DPV + W D + + A GL G+ + Sbjct: 64 RWVSHYIARNYYLEDPVRRHAPQAMSPYRWKDVSAQGDREAHIMDEATDAGLADGLGLPI 123 Query: 124 MLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKR 183 P + + + ++ + +L + ++ + + + R Sbjct: 124 HEPGGRIFLATVASHQQ-LTLGNDACVRTYALVTAFHALYTMRFATEQTQIPTAVKLTSR 182 Query: 184 EKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E E L W A GK+S EI I+ ISE+TVNFH KN K + ++ A AA GLI Sbjct: 183 EAECLTWVAYGKSSWEIGRIMRISEHTVNFHLKNAMAKFDTASRVTAAVRAANLGLI 239 >UniRef50_Q0B5I4 Transcriptional regulator, LuxR family n=1 Tax=Burkholderia ambifaria AMMD RepID=Q0B5I4_BURCM Length = 229 Score = 203 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 59/230 (25%), Positives = 101/230 (43%), Gaps = 3/230 (1%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQ 72 M+ +E+ + +D+ T +NYPEAW+S Y+ Sbjct: 1 MVFEIGSCTCMDELGRMLIDIGHLAGFDHVCYQEYRMSGGTLKNCRTLSNYPEAWLSLYR 60 Query: 73 AKNFLAIDPVLNPENFSQGHLMWNDDLFS--EAQPLWEAARAHGLRRGVTQYLMLPNRAL 130 + +L IDP+ S L+W D +F+ E + + R +GL GV+ + + Sbjct: 61 DRAYLTIDPIAQHALSSLMPLIWGDRIFATTEQREFRDEGRIYGLNDGVSFPAHSRHGDV 120 Query: 131 GFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRW 190 +SF R + LV ++ R E V + S RE EIL+W Sbjct: 121 ACVSFVRQARALDDGDMPCDVPSWGALVANLMLDACRRL-EAVQSDAPCLSTRELEILKW 179 Query: 191 TAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 AEGK++ +I+ I+S++E+ V H +++ KK + P + Q A+ GL+ Sbjct: 180 VAEGKSTWDISRIVSLTEHGVLHHIRSIMKKFDVPTRRQAVLMASRFGLL 229 >UniRef50_Q98A91 Transcriptional regulator n=4 Tax=Mesorhizobium RepID=Q98A91_RHILO Length = 241 Score = 203 bits (517), Expect = 4e-51, Method: Composition-based stats. Identities = 48/228 (21%), Positives = 96/228 (42%), Gaps = 8/228 (3%) Query: 10 RRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVS 69 T+L + + ++ + A + ++ T+P+ +NY W S Sbjct: 5 FETLLEQLSLSVDEVDFHNALASAAGAFDIPAFAYLSLVSDRVTKPR--LISNYHSGWTS 62 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMW-----NDDLFSEAQPLWEAARAHGLRRGVTQYLM 124 +Y + IDPV+ S+ W + + + Q L++ A G+ G+T L+ Sbjct: 63 HYLRHQYERIDPVIEWARCSECPFQWGPGLGHAGISTRQQQLFDEAAEFGICCGLTIPLV 122 Query: 125 LPNRALGFLSFSRCS-AREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKR 183 + ++F+ ++++ + ++++ + + R + ++ + R Sbjct: 123 DRRGGVAAMTFAADRLDPTFLRVAEQYEQALEIMAMCFHIGVRRKLARGLAVDGVSLTPR 182 Query: 184 EKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVA 231 E E L WTA+GK++ EI IL I E T FH N +KK+ K Q Sbjct: 183 EYECLEWTAKGKSAWEIGCILGIKERTAAFHLDNAKKKLGVRTKNQAV 230 >UniRef50_D2LFU9 Transcriptional regulator, LuxR family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LFU9_RHOVA Length = 251 Score = 203 bits (516), Expect = 5e-51, Method: Composition-based stats. Identities = 57/242 (23%), Positives = 90/242 (37%), Gaps = 13/242 (5%) Query: 10 RRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVP--FTRPKVAFYTNYPEAW 67 + ++++EV YD Y + P NYP+ W Sbjct: 6 IERFIEDANAAKSSKEVSALFGKALAVFGYDRYCYSLITDHPSLGLNAGHGLVCNYPDDW 65 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLF-----SEAQPLWEAARAHGLRRGVTQY 122 + +Y+ + DPV + W + + + A L G+ Sbjct: 66 MEHYRLNQYEKKDPVPQYGISASRPFTWASVVAQRKWHPDQMKVMHEAEEARLCDGIAVP 125 Query: 123 LMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT----PEM 178 + N L + P + L K+Q L + +A L E+ Sbjct: 126 VCGVNGELAGFGIASSHGGVSPDRT--LLHKVQALAIQFHLAFTELEKIETPLTENLAEV 183 Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 ++REKEI+ W AEGK+ + IA IL +S +TV FH N+ KK+NA +T A G Sbjct: 184 YLTEREKEIMSWAAEGKSDSVIAEILGVSHSTVRFHMNNVFKKLNANERTLATVKAIRHG 243 Query: 239 LI 240 LI Sbjct: 244 LI 245 >UniRef50_B1M9X4 Transcriptional regulator, LuxR family n=2 Tax=Methylobacterium RepID=B1M9X4_METRJ Length = 248 Score = 203 bits (516), Expect = 6e-51, Method: Composition-based stats. Identities = 57/235 (24%), Positives = 95/235 (40%), Gaps = 6/235 (2%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTR-PKVAFYTNYPEAWVSY 70 ++ R +R T +VY E+ YD + + P + + +P W Sbjct: 13 DIVHRLRRASTDVDVYSELRRSGAIFGYDVFLIAGLPRAPHENLYDCSLISGWPPEWGRR 72 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQP----LWEAARAHGLRRGVTQYLMLP 126 YQ + + +DPV+ + +W + + ++ P + E ARA L G Sbjct: 73 YQERRHMHVDPVIRHIRGTTDPFLWQEAVDAQVTPEGMVVMEEARAFSLNEGFCVPFHQI 132 Query: 127 NRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLM-ALMRLNDEIVMTPEMNFSKREK 185 + +SF R L L + + A R E TP + RE Sbjct: 133 DGTEAGVSFGGEQVRLSQDERAALHLVAIYAMSTAKAIARRRGLSEDDGTPPSPLTGREA 192 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E L+W++ GK++ EI +ILSIS TV H + +K+N+ +TQ A +I Sbjct: 193 ECLKWSSTGKSAWEIGVILSISTRTVEHHLGSAVRKLNSVTRTQAVAEALRRHII 247 >UniRef50_A3JLR7 Transcriptional regulator, LuxR family protein n=4 Tax=Rhodobacterales RepID=A3JLR7_9RHOB Length = 238 Score = 199 bits (507), Expect = 6e-50, Method: Composition-based stats. Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 6/231 (2%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQ 72 ++ + T++ I+ + +++D+ S PV + V Y NYP+ W +Y Sbjct: 8 IIDLSTQSNTSDNYLTFIDQLCEHMDFDFASYATMSPVTGS---VLGYANYPDEWKMHYM 64 Query: 73 AKNFLAIDPVLNPENFSQGHLMWNDDLFSEA-QPLWEAARAHGLRR-GVTQYLMLPNRAL 130 N +DP ++ S + W E+ ++ A GL G+T + P + Sbjct: 65 RMNLHRVDPTIHQSARSIAPVDWTRLSRGESFNSVFYRANDFGLTDQGLTVPVRGPFGDV 124 Query: 131 GFLSFSR-CSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILR 189 G LS +R CS RE +L+ + ++Q+ ++M+ + + S RE E+L+ Sbjct: 125 GLLSVTRSCSEREWKLLTRDKISELQMAAVHLHDSVMQSDVLSRALRRPSLSARETEVLQ 184 Query: 190 WTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 WTA GKT +I ILSIS TV H ++ ++K+ A Q A +I Sbjct: 185 WTAIGKTQQDIGDILSISHRTVEVHMRSAREKLGALTTIQAVGRAIGYQII 235 >UniRef50_Q6LB43 Probable TraR n=1 Tax=Oligotropha carboxidovorans OM5 RepID=Q6LB43_OLICO Length = 239 Score = 199 bits (506), Expect = 7e-50, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 78/232 (33%), Gaps = 10/232 (4%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQ 72 ++ + + + + +D ++ + T YP W Y Sbjct: 14 LIDALELARDQRMIKQALRHFCESNGFDRFAHLNVRST-----ETCVLTTYPAEWQRLYF 68 Query: 73 AKNFLAIDPVLNPENFSQGHLMWNDDL----FSEAQPLWEAARAHGLRRGVTQYLMLPNR 128 K + IDPV+ + W+ D + + + A G+R G++ + P Sbjct: 69 DKKYALIDPVVISAKRNMEIFSWSQDDASKYSKDVKRFFREADDFGIRSGLSIPIRTPFG 128 Query: 129 ALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEIL 188 L+ + R + M + + L R+ + + RE L Sbjct: 129 GTAILTLASEQRRVDFAGIQDTVRAMNAVA-FAHAHLNRVAAAPCRRTKYELTPREVTCL 187 Query: 189 RWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 W + GKT +EIA +L I TV + ++K+ N A LI Sbjct: 188 TWASLGKTMSEIADLLQIDVRTVRNYLDLAREKLGGSNIAHAVRLAVMQHLI 239 >UniRef50_D0LSA4 Transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LSA4_HALO1 Length = 254 Score = 199 bits (506), Expect = 8e-50, Method: Composition-based stats. Identities = 57/228 (25%), Positives = 85/228 (37%), Gaps = 11/228 (4%) Query: 24 EEVYHEIELQAQQLEYDYYSLCVRHPVPFT---RPKVAFYTNYPEAWVSYYQAKNFLAID 80 E ++ +D++ + YP AW Y K++ D Sbjct: 25 EHAQSILQDTLATYGFDFFCFAIYGAPRGAIAIDNYHLLLNAYPNAWADRYYEKHYWYSD 84 Query: 81 PVLNPENFSQGHLMWN-----DDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSF 135 PVL S + W + A+ + A H L GVT + + LG LS Sbjct: 85 PVLAHCGRSPTPIDWTTVQNQPAQPASAEQVMREAHEHDLCSGVTVTVRDVSGRLGILSL 144 Query: 136 SRC---SAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTA 192 + SA + + + +L + + S+RE+E LRW A Sbjct: 145 ATRDVYSAELRDRIRHAIPIAQFVLSHLVEKLEAHFHVRLEDLQRYKLSERERECLRWVA 204 Query: 193 EGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 GKTS EI IL I+E T FH N KK+ A N++ A G+I Sbjct: 205 AGKTSWEIGHILGIAERTAIFHLNNAMKKLGAVNRSHAVARALQHGVI 252 >UniRef50_A6CUQ5 LuxR, transcriptional regulator n=1 Tax=Vibrio shilonii AK1 RepID=A6CUQ5_9VIBR Length = 259 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 5/224 (2%) Query: 22 TAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDP 81 E++ ++ + + +++Y V PV R + TN P AW +Y+ + D Sbjct: 22 DFEDLSGKLAEVTEVIGFEHYLFAVSVPVTVMRAENVVLTNQPLAWRQFYEDNEVMYFDQ 81 Query: 82 VLNPENFSQGHLMWNDDL---FSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFS-R 137 V+ S L W L + + + + A GL G+T L + LG +SFS R Sbjct: 82 VVLHCRNSMLPLQWRSLLANDIPDDKNVIKLASDFGLGDGITIPLRANHGCLGLISFSNR 141 Query: 138 CSAREIPILSDELQLKMQLLVRESLMALM-RLNDEIVMTPEMNFSKREKEILRWTAEGKT 196 R+I S L + LV + + + + ++ + + + RE+ L W AEGK+ Sbjct: 142 KGTRKIDHESTILSTYVGSLVADYINDIRNHVCEKQFGQVKSSLTLREQICLAWVAEGKS 201 Query: 197 SAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 S E+A I+ SE TVNFH +N +K+NA ++TQ A TG I Sbjct: 202 SWEVAQIIGCSERTVNFHIQNASEKLNAFSRTQAVSKALLTGSI 245 >UniRef50_A4WT88 Autoinducer-binding domain protein n=8 Tax=Rhodobacterales RepID=A4WT88_RHOS5 Length = 233 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 6/232 (2%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 ++ ++ +L +D+ S P+ V Y NYP++W +Y Sbjct: 2 DIIDLSVVASDDANFLEYLDQLCARLGFDFASYATTSPMTGA---VQGYANYPDSWKMHY 58 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWND-DLFSEAQPLWEAARAHGLR-RGVTQYLMLPNRA 129 +N +DP ++ S + W + + ++ AA G+ +G+T + P Sbjct: 59 MRRNLHRVDPTIHKSALSIAPVDWARFERDERFRAVFFAAEDFGITPQGLTVPVRGPYGD 118 Query: 130 LGFLSFSR-CSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEIL 188 G LS +R C + L +Q+ A+MR + + S RE E+L Sbjct: 119 RGLLSVTRRCPRSDWDKLKRAAIGDLQVAAVHLHDAVMRSDVISRALRQPRLSTREIEVL 178 Query: 189 RWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +W A GK+ +I IL IS TV H ++ ++K+ + Q A GL+ Sbjct: 179 QWVAAGKSQMDIGDILGISHRTVEVHLRSAREKLGTLSTVQAVGRAIGLGLV 230 >UniRef50_A7KC31 Transcriptional activator protein n=1 Tax=Pseudomonas corrugata RepID=A7KC31_9PSED Length = 242 Score = 198 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 58/241 (24%), Positives = 103/241 (42%), Gaps = 5/241 (2%) Query: 2 QDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYT 61 F+ + + + + EE + +L + ++ P PF K++ Y+ Sbjct: 5 ISSHLFNLIQEVENNISGV-SEEEYTEILGWIFSRLGIEKFAYVHLEPTPFNNSKISIYS 63 Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND--DLFSEAQPLWEAARAHGLRRGV 119 NYP WV Y+ + DPV+ + WN+ +++ + ++G+++G Sbjct: 64 NYPSEWVDTYRKNSLYKSDPVMANTAITATPFFWNEIPAEIDNNPEIFDQSASYGIKQGY 123 Query: 120 TQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMN 179 T + P RA G L S P ++ + ++ S++A E + + Sbjct: 124 TVPIHEPGRAFGSLHLSS--EENDPDFPIIVRSNLFIIKTLSVIANQYRPMETTIESNLK 181 Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 S RE E LRW A GK EI +I++I+E TV FH K M +K++ N Q A Sbjct: 182 LSPREIEFLRWLALGKNYKEIGLIMNITERTVKFHAKQMTEKMDCTNVKQAMIKAVQLNF 241 Query: 240 I 240 + Sbjct: 242 V 242 >UniRef50_P35327 Transcriptional activator protein luxR n=26 Tax=Vibrionaceae RepID=LUXS_VIBF1 Length = 250 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 4/234 (1%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 ++ + + +++ + A+ + +YY + +P +P V+ NYPE W Y Sbjct: 10 EKIIDKIKTCNNNKDINQCLSEIAKIIHCEYYLFAIIYPHSIIKPDVSIIDNYPEKWRKY 69 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWN----DDLFSEAQPLWEAARAHGLRRGVTQYLMLP 126 Y L DPV++ + WN + E+ + + A+ GL G + + Sbjct: 70 YDDAGLLEYDPVVDYSKSHHSPINWNVFEKKTIKKESPNVIKEAQESGLITGFSFPIHTA 129 Query: 127 NRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKE 186 + G LSF+ L+ SL+ + + + +KREKE Sbjct: 130 SNGFGMLSFAHSDKDIYTDSLFLHASTNVPLMLPSLVDNYQKINTTRKKSDSILTKREKE 189 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L W +EGK++ +I+ IL SE TV FH N Q K+N N+ Q A TG I Sbjct: 190 CLAWASEGKSTWDISKILGCSERTVTFHLTNTQMKLNTTNRCQSISKAILTGAI 243 >UniRef50_B9JYA3 Transcriptional regulator protein n=1 Tax=Agrobacterium vitis S4 RepID=B9JYA3_AGRVS Length = 243 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 93/248 (37%), Gaps = 14/248 (5%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHP---VPFTRPKV 57 M + + L + ++ +T + + + + L +P + + Sbjct: 1 MTSPN-LDKTLSFLSQIKQTDTVKNLVDLTKHATSRYGVKNIVLGFPPEIGMLPSQQMQG 59 Query: 58 AFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARA 112 ++P+ W Y N DP + S+ +W+D + + + L + A+ Sbjct: 60 ILLADWPDEWSHLYFRDNLAFQDPAIRHIVSSEPSFVWSDFSKTLPISRDEKWLMDQAKE 119 Query: 113 HGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEI 172 + G T ++ + ++F+ + P + + M L+ + L Sbjct: 120 FFVSNGFTLPILSLDGRRAGVTFAGSDIDDSP----QARTGMALIASLVFARALELYGAN 175 Query: 173 VMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVAC 232 + RE+E++ W A GKT EI++I +SE V H N+ K+ A +++ Sbjct: 176 QKQT-TRLTPREREVIGWIANGKTDWEISVIFGVSEKAVTKHVGNIMMKLGAVSRSHAIA 234 Query: 233 YAAATGLI 240 A LI Sbjct: 235 EAFRQKLI 242 >UniRef50_A0ZSG9 LuxR n=1 Tax=Shewanella hanedai RepID=A0ZSG9_SHEHA Length = 243 Score = 196 bits (498), Expect = 6e-49, Method: Composition-based stats. Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 4/231 (1%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 + + E ++ + A L+ +YY + +PV + + NYP W YY Sbjct: 6 EINDNLRLSENDNDLNACLTKLALLLDCEYYLFAILNPVSIFKSDLYILDNYPSCWKKYY 65 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWN----DDLFSEAQPLWEAARAHGLRRGVTQYLMLPN 127 + + DP+++ + ++W+ + E A+ L+ G + + N Sbjct: 66 NDEKLIDYDPIIDYSASNYAPIIWSMLEQSKWDKNKTNVIEEAKNSNLKSGFSFPVHTKN 125 Query: 128 RALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEI 187 + G +SF+ + + I LLV L+ + ++ + + REKE Sbjct: 126 NSFGVISFANSNNEKTLISLHSNSYSYVLLVLPELLDSHQRINKNIGNTCTQLTPREKEC 185 Query: 188 LRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 L W +EGKT+ EI+ IL SE TV+FH N+Q K+ N++Q + TG Sbjct: 186 LAWISEGKTTWEISKILDCSERTVSFHITNLQTKLGTNNRSQSISKSILTG 236 >UniRef50_A3T328 Autoinducer-binding transcriptional regulator LuxR n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3T328_9RHOB Length = 269 Score = 196 bits (498), Expect = 7e-49, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 88/240 (36%), Gaps = 5/240 (2%) Query: 5 DFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYP 64 S R + ++ + + + + T Y Sbjct: 29 RSMSLSEDFSSR-AKSTPELDLETTLNDLSTLYGLKNITYFSASIPYANDDEHILITTYS 87 Query: 65 EAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLF--SEAQPLWEAARAHGLRR-GVTQ 121 WV +Y + + +DPVL+ + S + W ++ + A+ +G+ G+T Sbjct: 88 TTWVEHYFSLKYQDVDPVLHAGSRSLLPVDWGHLSTTGETSRNFFGEAKEYGIGETGLTI 147 Query: 122 YLMLPNRALGFLSFSRC-SAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 + +S + AR+ + E+ ++ R T Sbjct: 148 PVRGMLGEEAMISLNSDLRARDWELFCREMISDFTYFAHLLHDSVTRSRIHQHETDHPQL 207 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +KRE ++LRW A GKT+ E +IL ++E TV+F+ N K+ KTQ +A LI Sbjct: 208 TKREAQVLRWAARGKTAWETGIILGLTEKTVSFYLGNACAKLKVATKTQAVAFAVKERLI 267 >UniRef50_A9HQR0 Putative transcriptional regulator, luxR family n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HQR0_GLUDA Length = 239 Score = 195 bits (497), Expect = 8e-49, Method: Composition-based stats. Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 7/242 (2%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 M F ++ +R TA E+ + + Y + + A Sbjct: 1 MTKTVSFDKAFDLIEPLRRSTTASELRAAFVRATKSISDCYIASGRVKGGAPVNAETALV 60 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND--DLFSEAQPLWEAARAHGLRRG 118 YP+AW+ +Y + +L IDP + S W D+ + + ++ G++ G Sbjct: 61 -TYPDAWLKHYHERKYLDIDPTIVNAGRSYVPYRWEALQDISVKQRQMFLDIAETGIKGG 119 Query: 119 VTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEM 178 +T L P+RA SF+ A + D + + + + L +L++ + P Sbjct: 120 ITMSLHTPDRAAFVTSFAFTKA----VSEDRDLVALGFINSQYYETLSKLSEAELPGPVP 175 Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 FS+REKE L W + GKT+ +I++IL ISENT+N + KN+ K+ + Q A Sbjct: 176 TFSRREKECLLWVSRGKTTWDISVILGISENTINAYLKNVILKLGCSGRIQAVLRAIDLN 235 Query: 239 LI 240 LI Sbjct: 236 LI 237 >UniRef50_C7D7H9 Autoinducer-binding transcriptional regulator LuxR n=4 Tax=Rhodobacteraceae RepID=C7D7H9_9RHOB Length = 258 Score = 195 bits (497), Expect = 8e-49, Method: Composition-based stats. Identities = 47/234 (20%), Positives = 86/234 (36%), Gaps = 8/234 (3%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 T + ++ + + I + D+ + + Y +WV Sbjct: 6 ETFIEELEQATSLNHLQDSISDLRDLYKIDHIVYH----WVSSDGEQYGCGTYDRSWVQR 61 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGLR-RGVTQYLMLPN 127 Y +++L IDPV+ + W D A+ A G+ +G + + PN Sbjct: 62 YVEQDYLRIDPVVVGCFQRFHPVDWKRLDWSSKAARTFQAEAIEAGVGIQGYSIPIRGPN 121 Query: 128 RALGFLSFS-RCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKE 186 S S C ++ + + L+ + V S RE + Sbjct: 122 GQFALFSASHNCDDDWWANWTEANRRDLILIAHTFNQKGLEFEKNRVPEAAKGLSPREVD 181 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + + A G + A++A LSISE+T+ + ++ + K+ A N T A A GLI Sbjct: 182 AMTFLAMGYSRAQVANTLSISEHTLRAYIESARFKLGALNTTHAVARAMAHGLI 235 >UniRef50_A9DRS2 Transcriptional regulator, LuxR family protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DRS2_9RHOB Length = 239 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 54/217 (24%), Positives = 87/217 (40%), Gaps = 6/217 (2%) Query: 28 HEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPEN 87 + + AQ + + S H P +T Y AW++ YQ +N+ IDPV++ Sbjct: 23 EILNVLAQDMGLNNLSYLGFHKDPCGGSDPVIHTTYDPAWLARYQEENYHLIDPVVDSAL 82 Query: 88 FSQGHLMWNDDL--FSEAQPLWEAARAHGLR-RGVTQYLMLPNRALGFLSFSRCSA-REI 143 + W++ + + A G+R GV+ + L+ + E Sbjct: 83 EGTLPVDWSELPKVDRVTRDFFGEAMEFGVRQNGVSIPIRDHVHGKAVLTLNSDLRIHEW 142 Query: 144 PILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMI 203 + L L + P S+REKE+L+W A GKT+ E A I Sbjct: 143 RKYKRGIIADAIYLGCLLQSDL--VAGIAGGEPGPRLSRREKEVLKWAAVGKTAWETAQI 200 Query: 204 LSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +++S +TVN H N K++ NKT A LI Sbjct: 201 MTVSNSTVNHHLYNACAKLDVANKTHAVAKAIRAQLI 237 >UniRef50_B7T9X4 LuxR family transcriptional regulator n=1 Tax=uncultured proteobacterium RepID=B7T9X4_9PROT Length = 277 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 49/240 (20%), Positives = 92/240 (38%), Gaps = 11/240 (4%) Query: 5 DFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYP 64 + F + + + + + + + + + L + +++ C + +YP Sbjct: 2 NQFEVAQGFIEQCRAGAPVDVLARDFQRCTEALGFRHFACCSHVDPLKPPRRAVMLHSYP 61 Query: 65 EAWVSYYQAKNFLAIDPVLNPENFSQGHLMWN-----DDLFSEAQPLWEAARAHGLRRGV 119 + W + IDPV + S W+ D+L Q L+ A +GL RG Sbjct: 62 KEWAQLFSELELFDIDPVFLHASRSLVPFFWDTEAFNDELSPPQQELFNEAGRYGLTRGY 121 Query: 120 TQYLML---PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTP 176 T + P S S P +QL L + + + V P Sbjct: 122 TVPIHSVDAPRDFRASCSVVPDSESLEPAAYQAVQLMAFYLYDTASKDAQQKDPPPVQQP 181 Query: 177 EMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAA 236 S+RE++ L A+GK+ + IL +SE TV+ H +N ++++ + Q +A A Sbjct: 182 ---LSRRERQCLELAAQGKSDWVSSRILGLSERTVHNHVENAKRRLQVATRMQAVMHALA 238 >UniRef50_Q1GQ40 Transcriptional regulator, LuxR family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GQ40_SPHAL Length = 276 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 100/245 (40%), Gaps = 9/245 (3%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 M D + + F + E+++ + A ++ +D+++L P Sbjct: 24 MNDVKHYYLTEELAQEFTGADREEQLFAALTKAAGRMGFDHFALAFDRRGTGE-PASILV 82 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGL 115 NYP+AW Y + DP+ S W L + L AR G+ Sbjct: 83 HNYPDAWAKVYVGFDLSGTDPIRRASERSLTGFEWRHVDRYIPLSRGDRQLLSVARDSGV 142 Query: 116 RRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT 175 G T LP A G SF+ R + ++ ++L ++ + L + Sbjct: 143 GDGFTVPRHLPGEASGTCSFA---VRPHADIPADMLHAAEILGAIAIASARELIGSSPLR 199 Query: 176 PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 P ++R++E + W+A GKT+ EIA IL ISE TV H K +++ + ++ + A Sbjct: 200 PRPILTERQRECVLWSARGKTAGEIADILGISEETVVRHLKMARERYSVHCRSMLILCAL 259 Query: 236 ATGLI 240 GLI Sbjct: 260 FDGLI 264 >UniRef50_A4U2G3 Transcriptional activator protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U2G3_9PROT Length = 237 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 56/239 (23%), Positives = 98/239 (41%), Gaps = 12/239 (5%) Query: 8 SWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAW 67 SW M +E + A+ D+++ P + YP W Sbjct: 3 SWISEMTEELLWVEDISSAQDSLRRLAKLANVDFFAYGNSRPG---LENPYWDATYPTEW 59 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWN------DDLFSEAQPLWEAARAHGLRRGVTQ 121 + +Y A + IDPV+ S W + E + L+ A +G+R G T Sbjct: 60 MEHYFANRYQFIDPVVLEAQRSHLPFAWRFLLNRPGAMSPEQKLLFAEAAKYGIRDGFTI 119 Query: 122 YLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFS 181 N + +SF+ S E+ ++ +Q +++LL A+ RL + V P+ S Sbjct: 120 PFHSDNGCIAAMSFAFRSRAEMEHFAN-MQPRLKLLALYYHTAIERLLE--VEIPDDELS 176 Query: 182 KREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E++ L + A+G++ EI+ +L E+ V ++ + K+ A Q A A GLI Sbjct: 177 AMERQCLTFLADGRSLWEISGLLHRPESDVTSSLRSARDKLGAATTAQAVHKAIAEGLI 235 >UniRef50_A5EUQ4 Transcriptional regulator, LuxR family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EUQ4_BRASB Length = 243 Score = 193 bits (492), Expect = 3e-48, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 93/239 (38%), Gaps = 14/239 (5%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 + T E+ E A L + +++ ++YP++W S+ Sbjct: 9 DEFVDCLHSAHTEEDFRRVAERTAHALGFRWFAYFGHRANG-----PKLISSYPKSWTSH 63 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWN-----DDLFSEAQPLWEAARAHGLRRGVTQYLML 125 Y + + IDPVL + +W+ + + L++ A + +R G+T + Sbjct: 64 YFREGYDNIDPVLQEPRNTSRMFLWDGREARSAKSPKERRLFDDALSFKIRTGLTVRIPS 123 Query: 126 PNRALGFLSFSRCSAR---EIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPE-MNFS 181 + + + I + + L+M L + ++ R+ + + Sbjct: 124 SQNQFAAFTLAADDRSLGLDRFIETSQDMLEMVGLTYHAHVSAARIGRTPPDGQQGSPLT 183 Query: 182 KREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +RE++ L W ++GKT +IA +L +S V FH N ++ + A A GL+ Sbjct: 184 QRERQCLAWISDGKTMQDIAELLGVSPRGVKFHLDNARRNLAALTLPHAVALAFRQGLL 242 >UniRef50_Q8KW81 RC109 n=1 Tax=Ruegeria sp. PR1b RepID=Q8KW81_9RHOB Length = 258 Score = 193 bits (491), Expect = 4e-48, Method: Composition-based stats. Identities = 49/232 (21%), Positives = 86/232 (37%), Gaps = 4/232 (1%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQ 72 + +F R + +EV + + T Y + W +Y Sbjct: 22 ISEKFSRFSSLKEVSDFLASGLGDYGISDVTYYTPKSKVKGGGAGRLITTYSQDWQDHYF 81 Query: 73 AKNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGLRR-GVTQYLMLPNRA 129 ++ DPV+ S + W+ D + + ++ AR G+ GV + Sbjct: 82 EMSYQDKDPVIEMGQQSFCPIDWSILKDRCGDTKKMFGEAREFGVSDRGVVIPMRGHLGE 141 Query: 130 LGFLSFSRC-SAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEIL 188 + +S + E + + +++ L+ E + REK++L Sbjct: 142 ITLISMTSDLGGSEWVKYLSAHKSEFVNFAFCLHGSILSLSANTGGKEEPRLTVREKQVL 201 Query: 189 RWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +W A GKTS E AMIL +SE T+ + K+ A K C A + GLI Sbjct: 202 QWAAFGKTSWETAMILELSERTIETYIGKAVAKLEASTKAHAVCKALSLGLI 253 >UniRef50_A5EJ34 Putative transcriptional activator n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EJ34_BRASB Length = 213 Score = 193 bits (490), Expect = 6e-48, Method: Composition-based stats. Identities = 48/212 (22%), Positives = 85/212 (40%), Gaps = 6/212 (2%) Query: 34 AQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHL 93 +Q + ++ P T YP AWV Y+A + IDPV+ + Sbjct: 1 MEQYGFPCFAYLSFAPR-GDEDDALAITTYPSAWVEQYRANRYDRIDPVIARSVATTLPF 59 Query: 94 MWN----DDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREI-PILSD 148 W+ D L + + E A +R GVT + + L+ + C AR Sbjct: 60 AWSTDQFDALNNRQKWFLEEASEFEIRHGVTIPIHDRQGKVATLTLAACEARSAFEAQIS 119 Query: 149 ELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISE 208 + + ++ L+ L + ++RE+ L+W A GK++ + A I+++S Sbjct: 120 KYRHELHLIAIYLYARLRDVTPTPASPLRPCLTQRERICLQWAARGKSALDTAEIINVSR 179 Query: 209 NTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 TV FH +N ++K+ Q A +I Sbjct: 180 RTVVFHTQNAKRKLGVATVQQAVAKGLAYDII 211 >UniRef50_C4L8Q9 Transcriptional regulator, LuxR family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L8Q9_TOLAT Length = 254 Score = 192 bits (489), Expect = 7e-48, Method: Composition-based stats. Identities = 58/238 (24%), Positives = 94/238 (39%), Gaps = 9/238 (3%) Query: 3 DKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTN 62 ++F + R Q +T + + +++ + ++YY LC+ + + T Sbjct: 1 MQNFTFPQEEQHFRIQNCKTPQMLANQLTILCAANNFEYYQLCLTLRRGLQQTDLTLLTQ 60 Query: 63 YPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPL--WEAARAHGLRRGVT 120 P+ W +Y N + D + L W + E + + R G+ G+ Sbjct: 61 TPDNWAEHYAKNNTIQNDSLYQRAQTQSRPLFWQSEAKPEHENFLPMDCWRQFGMEEGIA 120 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 L P G+ + SR + + + L ++L + N Sbjct: 121 VPLHGPAGFCGYFALSRHKKEP---IRLQDFFHLSYLGHILQEQAIQLF----SPEQSNL 173 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 S REKE L W +EGKTS EIA IL I+E TVNFH N +K N+ Q TG Sbjct: 174 SGREKECLFWVSEGKTSWEIAQILGITERTVNFHLNNAIRKSGCKNRYQTVAKNIITG 231 >UniRef50_Q21BG2 Transcriptional regulator, LuxR family n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q21BG2_RHOPB Length = 245 Score = 192 bits (489), Expect = 7e-48, Method: Composition-based stats. Identities = 55/242 (22%), Positives = 93/242 (38%), Gaps = 11/242 (4%) Query: 5 DFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTR-PKVAFYTNY 63 F + RFQ + + + A Y + + + K ++ Sbjct: 7 RHFDRALAAIERFQTTTSPRALIDAVRDAAAAYGYRSFVIAAAPKLACNAFDKRVLLRHW 66 Query: 64 PEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQP----LWE-AARAHGLRRG 118 PEAW Y N+ DP+ W+D + + + + AA + +RRG Sbjct: 67 PEAWFGQYLQDNYQDHDPIAAHARQQTRAFCWSDAPWDRSDKKTAAVMDCAAHDYDMRRG 126 Query: 119 VTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEM 178 + +SF S M+L+ ++ LM + E + Sbjct: 127 FCVPIFGMRGYEAAISF----GGPEIDASPAATAAMELIAIYAMNQLMTMR-EPPARRQT 181 Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 S RE+E++ W A GKT+ + A IL+IS +TVN H + +K++A KTQ + G Sbjct: 182 TLSPREREVVAWAAVGKTAWDTARILAISTDTVNKHMASAMRKLDACTKTQAVVESIRRG 241 Query: 239 LI 240 I Sbjct: 242 EI 243 >UniRef50_C8SVZ2 Transcriptional regulator, LuxR family n=2 Tax=Mesorhizobium RepID=C8SVZ2_9RHIZ Length = 242 Score = 192 bits (488), Expect = 8e-48, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 92/232 (39%), Gaps = 9/232 (3%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRH-PVPFTRPKVAFYTNYPEAWVSYYQ 72 + + +AE + HE L ++ + + P + + W Y Sbjct: 13 ITKIDTARSAEAILHEFRLAMERYGLRNFLITGLPVPHGTDWQREILADGWSPEWHHRYV 72 Query: 73 AKNFLAIDPVLNPENFSQGHLMWND----DLFSEAQPLWEAARAHGLRRGVTQYLMLPNR 128 ++ + DP + S W + L + A+ + + A G++ G+ + +P Sbjct: 73 SEEYFLHDPCVAQCRHSPEPFRWAELPAARLVARAKLVMDEAAEFGMKEGICVPIHVPLA 132 Query: 129 ALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEIL 188 G ++ + + ++ L + +L L + RE+E+L Sbjct: 133 GPGVVTMASDRM----DVPPSAMPLIETLCVHTFRSLSGLGTPGDGYEPTPLTARERELL 188 Query: 189 RWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 W+A+GK++ +IA IL ++ NTV HQ+N++ K++A N A I Sbjct: 189 EWSAQGKSTDDIACILGVTRNTVESHQRNIRAKLDAINVAHAIVKALRRQEI 240 >UniRef50_Q13HW9 Transcriptional regulator, LuxR family n=3 Tax=Burkholderia RepID=Q13HW9_BURXL Length = 262 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 54/233 (23%), Positives = 87/233 (37%), Gaps = 9/233 (3%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY----TNYPEAWVS 69 L R + A +L + +Y + TR ++YP+ WV Sbjct: 31 LKRLACATDIPSLVESFGHAAGKLGFPHYVISRVTRSRSTRAPQTALEMIGSHYPKEWVQ 90 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWND--DLFSEAQPLWEAARAHGLRRGVTQYLMLPN 127 +YQ +++ DPV F W+D DL A GL G++ + + Sbjct: 91 HYQRRDYALTDPVHRAAFFQSAPYRWHDIIDLTKADHRFLGEASEAGLPAGLSIPVHQSD 150 Query: 128 RALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEI 187 ++ + + + S+ + L+ + L RL + + Sbjct: 151 GSVLLFNLA---GPLHSVNSEINARRACLMSAQFNFELHRLGLIHSRRAARLLTPCQIVC 207 Query: 188 LRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L W A GKTSAEI IL S TV++H K + +N +T A A GLI Sbjct: 208 LTWVARGKTSAEIGEILGCSHYTVDYHVKKAMEALNIWGRTAAAVQATVQGLI 260 >UniRef50_Q4ZNM6 Regulatory protein, LuxR n=9 Tax=Gammaproteobacteria RepID=Q4ZNM6_PSEU2 Length = 254 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 90/249 (36%), Gaps = 17/249 (6%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSL-----CVRHPVPFTRPKVAFYTNY 63 R Q T ++ L A L +D V H P + N Sbjct: 4 RLSDFNSRLQSASTLDQQMDCALLLASDLGFDAVIYDYSPVPVSHDGALITPSLLSLRNT 63 Query: 64 PEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSE----------AQPLWEAARAH 113 P W + + ++ + IDPV + S +W+ +E +P+ Sbjct: 64 PADWHALWCSQGYYQIDPVQHLAVASVSPFVWSYLPRAETVLKTFITDMHKPVVRYLHDS 123 Query: 114 GLRRGVTQYLMLPNRALGFLS-FSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEI 172 + GVT + +P L+ + + + + LL L D+ Sbjct: 124 HMTCGVTVPIHMPKGGFATLTGLCTDGSDVALEDARQSLAEFGLLAHAFQEVAYPLFDQK 183 Query: 173 VMT-PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVA 231 + + + + RE+E L W+AEG T+ EIA L+ S TV H + +K+ A N+ Q Sbjct: 184 IRSCNAIRLTPRERECLSWSAEGLTAREIADQLNRSVATVTLHLNSAMQKLGAKNRVQAV 243 Query: 232 CYAAATGLI 240 A L+ Sbjct: 244 VRAVHYRLL 252 >UniRef50_Q169S8 Transcriptional activator protein RaiR, putative n=14 Tax=Rhodobacterales RepID=Q169S8_ROSDO Length = 239 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 89/234 (38%), Gaps = 8/234 (3%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 +L ++ +T E + I ++ + + Y Y W + Sbjct: 8 EEVLAALEQADTLEGINEAIFTLRGHFGVEHMVYH----WVDSAGEQYGYGTYSLEWAAR 63 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGLRR-GVTQYLMLPN 127 YQ +N++ +DPV+ + W D A+ L A +GL G + + PN Sbjct: 64 YQEQNYIRVDPVVIGCYQRFHPVDWKRLDWSSKAARALRAEAATYGLGNQGYSIPIRGPN 123 Query: 128 RALGFLSF-SRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKE 186 + + C E ++E + ++ L+ + S RE + Sbjct: 124 GQFALFTVNTSCDDEEWAKFTEENRRELILIAHYFNQKALEFEPNKTPEQSQALSPREID 183 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + A G A++A LSISE+T+ + ++ + K+ A N T A + GLI Sbjct: 184 AMTLLAIGYNRAQVAETLSISEHTLRVYIESARFKLGAANTTHAVARALSRGLI 237 >UniRef50_B1K7Y6 Transcriptional regulator, LuxR family n=3 Tax=Burkholderia cepacia complex RepID=B1K7Y6_BURCC Length = 321 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 54/238 (22%), Positives = 89/238 (37%), Gaps = 9/238 (3%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTN----YP 64 + F + + L + +++ + YP Sbjct: 85 RWAPLATAFLNTVDLSSLLKLFGDVSASLGFPRFAISRVSRRHAGNGRAMSVETLCARYP 144 Query: 65 EAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDD--LFSEAQPLWEAARAHGLRRGVTQY 122 + WV++Y +++ +DPV W D L Q + AR GL GV+ Sbjct: 145 DHWVAHYAQRDYGPVDPVHRMAFARATPYRWADIRGLNRIEQRVLGEARDAGLTSGVSIP 204 Query: 123 LMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSK 182 L N + ++ + S + L L+ L RL P + S Sbjct: 205 LREANGDILLVNLASPSPEIKTEVHMRL---ASLIGALFHQELHRLMKPHRPEPALELSP 261 Query: 183 REKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 R++E L W A GK+S IA I+ IS +TV++H K + ++T A +A TGLI Sbjct: 262 RQQECLAWVARGKSSWAIAAIVGISPHTVDYHIAEAMKILGINSRTAAAVHAVTTGLI 319 >UniRef50_A4JQY4 Response regulator receiver protein n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JQY4_BURVG Length = 260 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 10/234 (4%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLC-VRHPVPFTRPKV---AFYTNYPEAWV 68 +L F + + + L + Y++ + +RP + A T+YP WV Sbjct: 30 ILSLFTDAKDISSLSDSLGDAVLPLGFPCYAVTRIALTCYRSRPSISMEAICTHYPNNWV 89 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWND--DLFSEAQPLWEAARAHGLRRGVTQYLMLP 126 +Y N+ A+DPV S G W D DL + + A GL+ G++ + Sbjct: 90 QHYLQHNYGAVDPVHRAAFTSSGPYRWADITDLSQNERHVLAEACDAGLKNGLSIPIREI 149 Query: 127 NRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKE 186 ++ ++ S S+R +L + L R L L + S R+++ Sbjct: 150 GGSILLINLSGPSSRINTGTKRQLASVISNLFRLELDRL----APPHPNEFIQLSPRQRQ 205 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L W A+GKTS++I MIL IS +TV +H + +N ++ A A+ GL+ Sbjct: 206 CLSWVAQGKTSSDICMILKISRHTVEYHITEAMRVLNVNSRIAAAVIASNYGLL 259 >UniRef50_B5J2H2 Autoinducer binding domain protein n=6 Tax=Rhodobacterales RepID=B5J2H2_9RHOB Length = 256 Score = 190 bits (482), Expect = 5e-47, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 84/232 (36%), Gaps = 8/232 (3%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQ 72 +L+ + + I + + YP +WV +Y Sbjct: 8 LLVTLDQATELSALQDTIVRLRDHYGVAHMVYH----WVSADGEQYGCGTYPLSWVQHYV 63 Query: 73 AKNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGLRR-GVTQYLMLPNRA 129 K++L IDPV+ + W D A A G+ G + + P+ Sbjct: 64 QKDYLRIDPVIIGCFKQFHPVDWKALDWSSKAAVAFRAEAMQAGVGNQGYSIPIRGPSGQ 123 Query: 130 LGFLSFSR-CSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEIL 188 S S + ++ + + L + + + + P S RE ++L Sbjct: 124 FALFSLSNNTDDTDWAAFTESNRRDLILCAHSFNQKALEVETKRMPDPVKPLSGREIDVL 183 Query: 189 RWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + A G + +++A L+ISE+T+ + ++ + K+ A N A + GLI Sbjct: 184 TYLAMGYSRSQVAQTLTISEHTLRAYVESARFKLGASNTMHAVARAVSEGLI 235 >UniRef50_Q03316 Regulatory protein rhiR n=2 Tax=Rhizobium leguminosarum bv. viciae RepID=RHIR_RHILV Length = 247 Score = 190 bits (482), Expect = 5e-47, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 89/241 (36%), Gaps = 12/241 (4%) Query: 8 SWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAW 67 + L ++ ++V +Q + Y+++ N+ W Sbjct: 10 NLVFDFLSESASAKSKDDVLLLFGKISQYFGFSYFAISGIPSPIERIDSYFVLGNWSVGW 69 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWNDD-----LFSEAQPLWEAARAHGLRRGVTQY 122 Y+ N++ DP+++ +W++ L +++ + + AR L G + Sbjct: 70 FDRYRENNYVHADPIVHLSKTCDHAFVWSEALRDQKLDRQSRRVMDEAREFKLIDGFSVP 129 Query: 123 LMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF-- 180 L +SF E LS + + L+ + L Sbjct: 130 LHTAAGFQSIVSF----GAEKVELSTCDRSALYLMAAYAHSLLRAQIGNDASRKIQALPM 185 Query: 181 -SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 + RE+EI+ W A GKT+ EIA IL S T+ N+Q+K+N N Q+ + + Sbjct: 186 ITTREREIIHWCAAGKTAIEIATILGRSHRTIQNVILNIQRKLNVVNTPQMIAESFRLRI 245 Query: 240 I 240 I Sbjct: 246 I 246 >UniRef50_B9TKR4 Transcriptional activator protein ahyR/asaR, putative n=1 Tax=Ricinus communis RepID=B9TKR4_RICCO Length = 234 Score = 189 bits (481), Expect = 7e-47, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 84/235 (35%), Gaps = 10/235 (4%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 + T + V + + Y + P F+ ++P W+ Sbjct: 3 DEFAAALEACATIDAVKALFKRRIAAHGYTASACGAFLPADKGPEPHFFFQDWPPDWLEL 62 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWNDD-----LFSEAQPLWEAARAHGLRRGVTQYLML 125 Y +NF+A D + W + L Q +W+ G G++ + Sbjct: 63 YVNRNFVAADYGVAEARRRIAPFTWREAKAERTLSRAEQDIWDTVVEWGWTDGLSVPIHG 122 Query: 126 PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLND-EIVMTPEMNFSKRE 184 P ++ + + L+ K+Q L + L V P+ + RE Sbjct: 123 PGGYFAIVTMAGKEQP----MPPALRGKLQQLAFLTHERCRALTGLAPVTDPQATLTHRE 178 Query: 185 KEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 E LRW A GKT +IA +L +S+ T H ++K+ A ++Q +GL Sbjct: 179 LECLRWVAAGKTDLQIARLLGVSQTTARTHIDQARRKLGARTRSQAVARLVLSGL 233 >UniRef50_C6B001 Transcriptional regulator, LuxR family n=13 Tax=Rhizobiaceae RepID=C6B001_RHILS Length = 251 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 100/247 (40%), Gaps = 22/247 (8%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVP--FTRPKVA---FYTNYPEA 66 +L+ + E V E+E + ++YY L P P+ +PE Sbjct: 8 QLLVILEECSNPEAVITELEQILRGCGFEYYGLPHHLPQSPLQQNPEPWAAALAGRWPEQ 67 Query: 67 WVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLF--------SEAQPLWEAARAHGLRRG 118 W Y AK + IDP++ +Q W + + + + A HGL G Sbjct: 68 WPQIYAAKKYALIDPMVRYLAHAQRPFRWREAMAAFRKDAYHRRMEQMMVDAFGHGLEDG 127 Query: 119 VTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVM---- 174 + + LG LS + P+ ++ + R++ L+ L E Sbjct: 128 YIFPIHGRSGILGSLSLAGKPIELSPVE----IALLEAVARKAFWRLLDLKGEAQALETV 183 Query: 175 -TPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 + ++RE EIL + AEG TS EI+ +L IS +TV+++ +Q K+ A N+ Sbjct: 184 LPADTPLTRREMEILHYLAEGMTSMEISKMLKISNHTVDWYMNGLQDKLKAKNRQHAVAL 243 Query: 234 AAATGLI 240 A GLI Sbjct: 244 AFRHGLI 250 >UniRef50_A8LML6 Putative transcriptional regulator n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LML6_DINSH Length = 243 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 50/241 (20%), Positives = 90/241 (37%), Gaps = 12/241 (4%) Query: 7 FSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPF--TRPKVAFYTNYP 64 + T + R ET +++ + A D S F +P Sbjct: 1 MTRLETFMDGVSRAETPAQIWDAVLPFAHSFGIDKVSYHNTPAFGAVPGSETAVFARGFP 60 Query: 65 EAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGV 119 E+W+ Y + +DP+ + W+D L + + GL G+ Sbjct: 61 ESWLCDYVNERLYEVDPIPAYAAHATEPFRWSDIAKLTPLTAPETDFLKRLLQQGLGDGL 120 Query: 120 TQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMN 179 + PN G++ S+ P LS ++Q + + + L Sbjct: 121 ALQVFGPNMRNGYVGVGFASSD--PDLSGGDIRELQAAAQAAHLRYCTLVPVATPE---A 175 Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 + RE+E+L W A GK+++ IA IL +S +TV+ + + K+ ++T A GL Sbjct: 176 LTPREREVLGWIARGKSNSVIAEILGVSPHTVDTLVRRIYGKLEVADRTTAAIRGIGAGL 235 Query: 240 I 240 I Sbjct: 236 I 236 >UniRef50_Q39VH7 Transcriptional regulator, LuxR family n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39VH7_GEOMG Length = 246 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 56/243 (23%), Positives = 97/243 (39%), Gaps = 9/243 (3%) Query: 3 DKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRH--PVPFTRPKVAFY 60 + ++ + E + L +D + Sbjct: 5 SRREAVRLLELIDASRSCADMERLKRLFHSLNDLLSFDMAVCGTARFDGAGTMNAQQIIN 64 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFS--EAQPLWEAARAHGLRRG 118 +YPE W+S Y +F A+DPV+ W++ QP A G+R+G Sbjct: 65 ISYPEEWLSLYAEHDFAAVDPVVRAHIADFSAKPWSEAYLKWGRPQPFLSLAEDFGIRKG 124 Query: 119 VTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTP-E 177 + ++ N + FS C + + P+ + ++ + +L AL R + + Sbjct: 125 YSFGVLSSNDRTASI-FSLCVSEKYPVHTPQI---LDILAPYFHEALRRTVQTDLPSACL 180 Query: 178 MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAAT 237 + RE E++ W A GK EI++IL ISE TV FH + +K+ A N++ A +T Sbjct: 181 ATLTPREIEVISWLANGKNYWEISVILGISERTVKFHTSTIVQKLGAANRSHAVAIAIST 240 Query: 238 GLI 240 GLI Sbjct: 241 GLI 243 >UniRef50_B0M190 AHL-dependent transcriptional regulator n=2 Tax=Gluconacetobacter RepID=B0M190_9PROT Length = 236 Score = 187 bits (476), Expect = 2e-46, Method: Composition-based stats. Identities = 51/229 (22%), Positives = 97/229 (42%), Gaps = 8/229 (3%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQA 73 L + T ++ + + ++ + + + + YP WV++Y Sbjct: 12 LHDLENAATKHDLLSIYLDAVLSVGNVHVTIVELNRIEDPKEN-FIHVGYPTEWVNFYIE 70 Query: 74 KNFLAIDPVLNPENFSQGHLMWND--DLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALG 131 N++ DP++ F W++ ++ + + G+++G+T + +R + Sbjct: 71 NNYIVSDPIIKKSRFMSHPYFWHEIKNINKAEKKIIRDVSEFGIKKGLTIPVHTHDRVIY 130 Query: 132 FLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWT 191 + F+ + E++L ++ L + +L DE + REKE L WT Sbjct: 131 AICFAFTDKN----IDREIELYLRALSNFFITGYKKL-DEPADMSLPILTPREKECLTWT 185 Query: 192 AEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 A+GK+S E MI+ +SE TVNFH N K+ N+ A GLI Sbjct: 186 AKGKSSWETGMIVGVSERTVNFHINNALLKLKCTNRIMGVVRAICAGLI 234 >UniRef50_A6ULF7 Response regulator receiver protein n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6ULF7_SINMW Length = 243 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 51/231 (22%), Positives = 90/231 (38%), Gaps = 4/231 (1%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQA 73 L Q + ++ + + + ++ V + T YPE W Y Sbjct: 11 LRTLQAAKHRADLQSALGELCEHYGVSHMTILVVCSGGRSGSYPYCCTTYPERWTEKYVG 70 Query: 74 KNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGLR-RGVTQYLMLPNRAL 130 K F IDPV++ + + W+ D +A L++ AR + + G+T + P Sbjct: 71 KCFFEIDPVIDVIRWGFLPVDWSSLDRRSEQAHRLFKEARLYDIGPHGLTIPIRGPKGER 130 Query: 131 GFLSFSRC-SAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILR 189 LS + R L ++Q+L ++ + N S+RE + + Sbjct: 131 CLLSVTSNLPGRHWSRLRASSIHELQILSHYLHETVLSASGLRGTDRYRNLSRRESQCFQ 190 Query: 190 WTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 A G+ S +IA L ISEN V + ++ + K+ A Q A+ LI Sbjct: 191 LLATGRISKQIAADLGISENAVKLYLRSARMKLGAATSHQAVARASFLELI 241 >UniRef50_C9NVD6 Transcriptional activator protein luxR n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NVD6_9VIBR Length = 240 Score = 187 bits (475), Expect = 3e-46, Method: Composition-based stats. Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 4/231 (1%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQ 72 ++ +Q +++ E + +E + +Y+ L V + N+P Sbjct: 7 LIDDYQTIDSIESMGRLLEQLNHIVNSEYFVLGVSFDPHIKNGRFIVVDNFPADCREDSC 66 Query: 73 AKNFLAIDPVLNPENFSQGHLMW--NDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRAL 130 + +DP+ + +W + + +Q L+ + G+ +G++ + N + Sbjct: 67 NLGLMYVDPICKFGASNCMPSVWESSKQIDIHSQELFSLSHIQGIEQGISIPIHGLNGEV 126 Query: 131 GFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRL-NDEIVMTPEMNFSKREKEILR 189 G LSF+ P +D + L QL+V + L RL + + + RE + L Sbjct: 127 GMLSFATSDVIAYPTHTD-VLLFAQLIVPLIVQNLSRLSHASQTEHSQAMLTNREIQCLT 185 Query: 190 WTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 W A+GK+++EIA I+ +E TV FH N KK+ A N+ Q A G I Sbjct: 186 WAADGKSASEIADIVDCTERTVKFHLSNACKKLGATNRCQAVTRALLGGHI 236 >UniRef50_C3KBP0 Putative LuxR-family regulatory protein n=2 Tax=Pseudomonas RepID=C3KBP0_PSEFS Length = 235 Score = 187 bits (474), Expect = 4e-46, Method: Composition-based stats. Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 14/243 (5%) Query: 2 QDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYT 61 DF + R + + +++ Y+ Y L + P P T Sbjct: 1 MLDDFSLLANDLHRR--------DWERHLRKILRRIGYERYLLSLG-PSTTHDPFNRIMT 51 Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSE---AQPLWEAARAHGLRRG 118 YP W+ Y+ +NF+ +DP++ L W W+ +GL RG Sbjct: 52 TYPSDWLKRYKDENFIQVDPIIRHCRHHFAPLFWGRARLKARGCTNRFWKEREGYGLLRG 111 Query: 119 VTQYLMLPNRALGFLSFSRCSAREIPILSDELQLK-MQLLVRESLMALMRLNDEIVMTPE 177 V+ L N G L+ ++C + + D M ++ L+ + + + V P Sbjct: 112 VSIPLRF-NEMAGSLNVAQCVSDTDELADDLNGPLGMLFMLIPFLLEGSQKHLKTVGEPP 170 Query: 178 MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAAT 237 + + RE E+L+WT GKT+ E++ IL SE T+NFH N +K+ + ++ Q A A Sbjct: 171 SSLTLRESEVLKWTGVGKTTWEMSCILGCSERTINFHIANASRKLGSFSRRQAVGVALAQ 230 Query: 238 GLI 240 GLI Sbjct: 231 GLI 233 >UniRef50_Q6B346 Acylhomoserine lactone dependent transcriptional activator n=1 Tax=uncultured proteobacterium QS1 RepID=Q6B346_9PROT Length = 223 Score = 186 bits (472), Expect = 6e-46, Method: Composition-based stats. Identities = 59/224 (26%), Positives = 95/224 (42%), Gaps = 11/224 (4%) Query: 25 EVYHEIELQAQQLE-YDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVL 83 E+ +E L ++Y VR K +NYP+ W+ Y+A+++ DPV+ Sbjct: 3 ELAPSLENALSCLGEFNYSYYVVRK---SKNTKPIIVSNYPDDWLMLYEARSYHLYDPVI 59 Query: 84 NPENFSQGHLMWNDDLFSEA----QPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCS 139 N W D S+ + L+++A + + G T L LS R Sbjct: 60 NYGMRRFAPFSWCDAQASDTADIGKELFQSAEKYQISSGFTFVLHDAAELFASLSVCRSG 119 Query: 140 AR---EIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKT 196 + +++M L+ + + DE+ P S RE EIL+W +GK Sbjct: 120 RGSDFGQRVADHSAEIQMALINFHDHILSTQTVDELFPLPANLLSAREIEILQWVGKGKA 179 Query: 197 SAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E+A+I +ISE+TV FH + K+N N Q A G+I Sbjct: 180 YFEVAIICAISEHTVKFHISKISTKLNVLNAKQAVYEAIRRGII 223 >UniRef50_Q4ZW02 Regulatory protein, LuxR:Autoinducer-binding n=9 Tax=Pseudomonas syringae group RepID=Q4ZW02_PSEU2 Length = 247 Score = 186 bits (472), Expect = 7e-46, Method: Composition-based stats. Identities = 49/225 (21%), Positives = 85/225 (37%), Gaps = 10/225 (4%) Query: 24 EEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVL 83 ++ + E ++ ++ K +NYP++W+ Y A N+ IDP++ Sbjct: 25 RQLIEDFENDLHRIG--DFTYAYFSSPKTRTVKPVILSNYPDSWLKSYIASNYHLIDPII 82 Query: 84 NPENFSQGHLMWNDDLFS----EAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCS 139 S W + + E + + + L G T L + LS Sbjct: 83 KHAWHSITPFFWREARHAIQGVETDDFLKRSAKYQLSSGATFTLHDASGLFAALSLCNAR 142 Query: 140 AR-EIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMN---FSKREKEILRWTAEGK 195 + + + +Q+ + L + + P+ S RE +L+W A GK Sbjct: 143 QQTDFDQRIRDKAADIQMSLIRFHDRLTKTQAPHELFPQPTRCKLSSREIGVLKWVAMGK 202 Query: 196 TSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +EIA I SISE TV FH N+ K+ Q A G++ Sbjct: 203 AYSEIAEIFSISERTVKFHMSNVSSKLEVRTAKQAVYKAINMGMV 247 >UniRef50_B9K3B4 Two-component transcriptional regulator LuxR family n=1 Tax=Agrobacterium vitis S4 RepID=B9K3B4_AGRVS Length = 240 Score = 186 bits (472), Expect = 7e-46, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 80/234 (34%), Gaps = 9/234 (3%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 + R ++ + ++ + + + Y V +P W + Sbjct: 8 EFMERCDNQKSVDNLFSDFGTVIAKRGFHSYIYTGLPAVGDDVKHYVVKNAWPPGWTEQF 67 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWNDDL-----FSEAQPLWEAARAHGLRRGVTQYLMLP 126 + N+ A DPV W + + + + A + L G+ + P Sbjct: 68 EGLNYFADDPVSRWSLSQSKPFTWKTAREETKATARTKEIQQEADRYRLCDGIVFPMFDP 127 Query: 127 NRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKE 186 N +S + L+ E + LL M L + + REKE Sbjct: 128 NSWQSVISLATDDKGG---LAKENIGDLYLLSSYCAMTANNLL-RRAEQADHRLTDREKE 183 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 IL+W + GKT EI IL ++E +V ++ + N+ Q A GLI Sbjct: 184 ILQWVSRGKTDWEIGTILRMTEGSVTQRLARIRDTLGVKNRPQTVSQAIRLGLI 237 >UniRef50_A5ELZ2 Transcriptional regulator, LuxR family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5ELZ2_BRASB Length = 242 Score = 185 bits (470), Expect = 1e-45, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 89/235 (37%), Gaps = 5/235 (2%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 + R R + E+ + + + E + RH P Y WV Sbjct: 6 ESACERIVRTTSLSELSNVLSETRHEYELAHLVYNARHLPRTEEPNPLLLLTYDAEWVQR 65 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGL-RRGVTQYLMLPN 127 Y+ +++ IDPV+ S L W+ + ++ + + AR+ G+ R G+T + P+ Sbjct: 66 YKTQDYFQIDPVIKHGLASLLPLDWSNLESGEADVRAFFREARSFGVGRNGMTIPIRGPH 125 Query: 128 RALGFLSFSRC-SAREIPILSDELQLKMQLLVRESLMALMRLND-EIVMTPEMNFSKREK 185 S + SA + + ++ +RL+ + S+RE+ Sbjct: 126 GERALFSLTSNLSAGQWQTTRLAMMRDFMIIAYFFHDQAVRLSGMRDLPGMGRPLSRRER 185 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E L+ A G +IA L +S V + + + K+ TQ A + LI Sbjct: 186 ETLQLAARGFAPKQIAADLRVSTTAVRLYLQTARTKLECTTLTQGIAKAISLDLI 240 >UniRef50_C8SKW4 Transcriptional regulator, LuxR family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SKW4_9RHIZ Length = 245 Score = 185 bits (470), Expect = 1e-45, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 88/243 (36%), Gaps = 8/243 (3%) Query: 2 QDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYT 61 +D T L R + + + A + + ++ +P +PK + Sbjct: 1 MTRDMPLVFETFLERLSQSVDEADFREALAEAAARFDLLSFAYLSLPSLPSGKPK--LIS 58 Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDL-----FSEAQPLWEAARAHGLR 116 NYP W Y + +DPV+ W DL Q L++ A +R Sbjct: 59 NYPPRWAMQYLENQYEKLDPVILRARNGGRPFQWGSDLWGGKMSPAQQQLFDEAARFSIR 118 Query: 117 RGVTQYLMLPNRALGFLSFSRCSAREIPI-LSDELQLKMQLLVRESLMALMRLNDEIVMT 175 G+T ++ ++F+ R + + + + + +QL+ + R Sbjct: 119 CGLTIPIVDLRGRTAAVTFAADEPRPVFLRVIERYEQALQLMATCFHRCVRRKLPGDRTV 178 Query: 176 PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 + + RE LR A G ++ IL I T+ FH +N +KK+ + Q Sbjct: 179 DGILLTSREYMCLRSAARGNSAWVTGRILGIKPRTIAFHLENAKKKLGVRTQNQAIALLG 238 Query: 236 ATG 238 + G Sbjct: 239 SQG 241 >UniRef50_Q1QF64 Transcriptional regulator, LuxR family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QF64_NITHX Length = 234 Score = 185 bits (469), Expect = 1e-45, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 89/236 (37%), Gaps = 13/236 (5%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 + ++ + +++ I+ +D Y+ H +T+YP W + Sbjct: 6 QGLIDAVDVAQDERSIHNAIKNFTVASGFDRYAYIHVHAGDG-----VGFTDYPVEWQNI 60 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWNDDL------FSEAQPLWEAARAHGLRRGVTQYLM 124 Y K + IDPV+ + W+ + E + + A G+R GV+ + Sbjct: 61 YLEKRYTVIDPVVTTAKRTMKMFAWSAEDPTVWRGSREIKQFYSEATDFGIRSGVSVPIR 120 Query: 125 LPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKRE 184 ++ + R L ++ L + + L + + E++ S +E Sbjct: 121 TSYGRTAMITLASD--RRQVELPPWDPMQAALALAYIHIHLSLASASSLKVGEVSLSAQE 178 Query: 185 KEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L W++ GK+ IA +L I TV F+ N + K+ A N Q A LI Sbjct: 179 ATSLSWSSHGKSMNVIADLLGIKPRTVQFYLDNARDKLGASNLQQAVRIAMEKKLI 234 >UniRef50_C5SPH1 Transcriptional regulator, LuxR family n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SPH1_9CAUL Length = 254 Score = 185 bits (469), Expect = 1e-45, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 84/239 (35%), Gaps = 12/239 (5%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDY--YSLCVRHPVPFTRPKVAFYTNYPEAWV 68 + R+ + E ++ L +D +S+ + + + YP W Sbjct: 17 EQFIDDTSRVRSVERLFVVFIEAMAHLGFDRVNFSVMRDMDLDASAQGFGLISTYPTVWQ 76 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYL 123 YY IDPV+ S W D +L + A A GL G+ Sbjct: 77 DYYAHNGLARIDPVVKWAVGSVRPFRWADIEHEAELTRRQRQFLREAEAGGLYNGIGVPF 136 Query: 124 MLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDE--IVMTPEMNFS 181 P G ++ + + P+ E + RL + + + Sbjct: 137 PGPKTLRGGIALATSVRKARPM---ENLDVLAAYCHHFYAVYKRLVPPGLRLSPAAASLT 193 Query: 182 KREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + E+E+L A G ++ IA LSI +V+FH +N+ +K N+T A G I Sbjct: 194 RTEQEVLFRLAHGLSNEIIADRLSIKAGSVDFHVQNIFRKFGVNNRTAAAMKGLMGGYI 252 >UniRef50_Q216C2 Transcriptional regulator, LuxR family n=2 Tax=Rhodopseudomonas palustris RepID=Q216C2_RHOPB Length = 240 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 84/235 (35%), Gaps = 4/235 (1%) Query: 10 RRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVS 69 L R + +++ + + + H +P Y +AWV Sbjct: 3 IEQALSTIDRANSVDDLARTLVDWRNESGVAHLVYHATHVPGCEQPNPVLLLTYDDAWVK 62 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGL-RRGVTQYLMLP 126 Y +++ IDPV+ + + W + +A+ + A ++G+ R G T + P Sbjct: 63 RYVEQDYFGIDPVVVAGRDAVLPIDWMSVEHATPQARQFFAEAESYGVGRHGFTLPIRGP 122 Query: 127 NRALGFLSFS-RCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREK 185 + + + LL MRL + S+RE+ Sbjct: 123 AAERALFTITTNATDDHWHRWRFSYLKDFHLLAHYLHDRAMRLAGLRLDHAMRPLSRREQ 182 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + L+ G+T +IA L +S + V+ + + ++K+N Q A L+ Sbjct: 183 QCLQGLVHGRTPGQIAGDLELSASAVHGYLRTARRKLNCATHEQAIAKAVRLELL 237 >UniRef50_Q89V15 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89V15_BRAJA Length = 242 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 50/240 (20%), Positives = 90/240 (37%), Gaps = 12/240 (5%) Query: 8 SWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPK-VAFYTNYPEA 66 S + +++ + + Q +DY+ P+ P+ P Sbjct: 6 SRAFDFVETVRQLPDVASILDAMSRTLGQHGFDYFCSSYVAPLSTESPREAVLAERLPAG 65 Query: 67 WVSYYQAKNFLAIDPVLNPENFSQGHLMW------NDDLFSEAQPLWEAARAHGLRRGVT 120 ++ Y ++ DP L + W + + A L AR G+ GV Sbjct: 66 FLDMYSEAQYVWHDPALRYCRTTLQPFRWFREAPYDPEREPRAVELVRRARDFGMVDGVV 125 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 ++ P G + F L + + L+ + +++L P++ Sbjct: 126 IPVISPAGRTGQVWFGGAEI----DLPERDLPALHLMALYAFDRVLKLRGLPAA-PQLAL 180 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 S RE+E+L A G++S EIA L+I+ TV H K+ KK+ A +TQ A +I Sbjct: 181 SLREREVLTLAAVGRSSDEIADALAITGRTVKAHIKSCCKKLGAATRTQAVMIAMRDRII 240 >UniRef50_Q46967 Transcriptional activator protein echR n=100 Tax=Enterobacteriaceae RepID=ECHR_ERWCH Length = 250 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 61/230 (26%), Positives = 97/230 (42%), Gaps = 15/230 (6%) Query: 24 EEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVL 83 + + + + + Y+ + + T V +NYP WV Y++ N+ IDPV+ Sbjct: 13 STIQNYLNRKLKSYGDLKYAYLIMNKKKPT--DVVIISNYPSEWVEIYRSNNYQHIDPVI 70 Query: 84 NPENFSQGHLMWNDDLFSEAQ----PLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCS 139 W+DDL ++ ++ ++ + + G T L P L LSF Sbjct: 71 LTAINKISPFSWDDDLVISSKLKFSRIFNLSKEYDIVNGYTFVLHDPGNNLATLSFMFEE 130 Query: 140 AR--EIPILSDELQLKMQLLVRESLMALMRLNDE-------IVMTPEMNFSKREKEILRW 190 R E+ + + K+Q+L+ + L L E FS+RE EIL W Sbjct: 131 NRSGELEEIVQNNKEKLQMLLISAHEKLTSLYREMSKNKNNSKSQEPNIFSQRENEILYW 190 Query: 191 TAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + GKT EIA+IL I+ +TV FH N+ KK+ N LI Sbjct: 191 ASMGKTYQEIALILGITTSTVKFHIGNVVKKLGVLNAKHAIRLGVEMNLI 240 >UniRef50_A3UFL6 Transcriptional regulatory protein, LuxR family protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UFL6_9RHOB Length = 241 Score = 183 bits (464), Expect = 5e-45, Method: Composition-based stats. Identities = 59/237 (24%), Positives = 93/237 (39%), Gaps = 12/237 (5%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKV---AFYTNYPEAWV 68 + L + ++ E + H + + + + V P PF Y +PEA Sbjct: 7 SFLEQSADSDSNEALCHAFKAFVETFGVEAFGYQVL-PSPFDAADTSFDFEYNTFPEAMQ 65 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYL 123 Y + DPV + + W D +Q L+E R G G T + Sbjct: 66 DVYFEERLYDHDPVTSRAATALQPQFWFDVEQTTPGTRFSQRLFELLRQSGFVDGFTIPV 125 Query: 124 MLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKR 183 P G +F C +QL+M L + L + + + + S+R Sbjct: 126 FGP---YGLAAFVACGRFSGAFNLTAIQLRMLQLGCQELYSRTIMLRDYDAPAPPHLSER 182 Query: 184 EKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E EIL+W A GK++A IA IL +S +TV+ + K+NA N+ A GLI Sbjct: 183 EVEILQWLARGKSNAVIAAILGVSPHTVDTIMRRAFVKLNASNRIAAVLKALRVGLI 239 >UniRef50_Q2K2Q3 Autoinducer transcriptional regulator protein n=15 Tax=Rhizobiales RepID=Q2K2Q3_RHIEC Length = 261 Score = 183 bits (464), Expect = 5e-45, Method: Composition-based stats. Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 7/233 (3%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 T F M+ A V ++ D+ + + + T YP++WVS Y Sbjct: 24 TYPDAFSAMKNAATVAAALDEFQSHYPIDFVTFHLARTIVDNVDAPFVRTTYPDSWVSRY 83 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWND-DLFSEAQPLWEAARAHGLR-RGVTQYLMLPNRA 129 +++ +DP++ Q W + D+ AQ A HG+ GV+ ++ +R Sbjct: 84 LLNDYINVDPIIREGFSRQLPFDWREIDITETAQEFMVDAELHGIGTNGVSVPIVDKSRR 143 Query: 130 LGFLSF-SRCSAREIPILSDELQLKMQLLVRESLM-ALMRLNDEIVMTPEMNFSKREKEI 187 LS S+ S E ++ + + L A+ L+ E P RE E Sbjct: 144 -SLLSINSQKSDEEWTLIERQFLPEWLELGFLLHRKAVFELHGENDPVPA--LGSREIEC 200 Query: 188 LRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L W + GK S +I IL +SE+T + K+ + K+ P + +A LI Sbjct: 201 LHWASRGKDSKDIGKILGLSEHTTRGYLKSARYKLGCPTLSAAIAHAVHLNLI 253 >UniRef50_Q11IH2 Transcriptional regulator, LuxR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11IH2_MESSB Length = 241 Score = 182 bits (463), Expect = 6e-45, Method: Composition-based stats. Identities = 45/243 (18%), Positives = 86/243 (35%), Gaps = 7/243 (2%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 M + + ++ + + EE + L + S + Sbjct: 1 MLGGQDDALQAGIVETVRSAKNIEEAIFLLRD---GLGLAHVSFHLNVSGAAPLDYPYVR 57 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND-DLFSEAQPLWEAARAHGLRR-G 118 T P W+S Y + ++ DPV+ S W++ ++ + + E AR+HG+ G Sbjct: 58 TTLPSQWISRYVLRTYVGHDPVMREGFSSLRPFSWHELEMSEKEREFMEDARSHGIGAQG 117 Query: 119 VTQYLMLPNRALGFLSFSRCSA-REIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPE 177 + + LS + + + + + + Sbjct: 118 YSIPTVDRFSRRSLLSLTADLDLGLWAGFIRRHASSVIEISQVLHQKALNELGIGEPSGA 177 Query: 178 MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAAT 237 + RE+E L WTA GK S +IA IL +SE TV + + ++K+ +Q A Sbjct: 178 -TLAPRERECLLWTARGKDSKDIAGILDLSEYTVRSYLRTARQKLQCRTLSQAVATATRQ 236 Query: 238 GLI 240 +I Sbjct: 237 RII 239 >UniRef50_A5V2N0 Transcriptional regulator, LuxR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V2N0_SPHWW Length = 254 Score = 182 bits (462), Expect = 9e-45, Method: Composition-based stats. Identities = 52/244 (21%), Positives = 91/244 (37%), Gaps = 7/244 (2%) Query: 2 QDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYT 61 D + + E++ ++ I QQ + +++L + R T Sbjct: 7 IDTAQLRDFEEVHKACEAAESSAQLSEVIAGAIQQFGFRWFALVDDGDLYKHRSGCMMLT 66 Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLR 116 NYP +WV + DPV S L W+ + E RAHGL Sbjct: 67 NYPSSWVDEVISARLYRDDPVHAASIRSPTGLCWDRIPDVIAPTRAQLSVLERGRAHGLT 126 Query: 117 RGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTP 176 G T +P F S +R R + + E+ AL++ V Sbjct: 127 TGYTVPFRIPGERGAFFSIARPKDRSFTYSEAISAQLLGGIAFEAGRALVK--GRAVKAH 184 Query: 177 EMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAA 236 + R+ + LR A GKT E+ IL +S +T++ + + +++ ++Q+ AA Sbjct: 185 GAPLTPRQIDCLRLIAAGKTEWEMGKILGLSPSTIHEYVEAARRRYGVKTRSQLVLAAAR 244 Query: 237 TGLI 240 G + Sbjct: 245 DGYV 248 >UniRef50_Q9L6U7 Acylhomoserine lactone dependent transcriptional activator n=2 Tax=Pseudomonas RepID=Q9L6U7_PSEFL Length = 242 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 51/206 (24%), Positives = 79/206 (38%), Gaps = 8/206 (3%) Query: 43 SLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDL--- 99 S +NYP W+ Y+ N+ IDP+++ S W+D L Sbjct: 37 SYAYFAAPRNREVAPLIVSNYPARWLKAYKNANYHLIDPIIHHGLKSCAPFSWSDALQAA 96 Query: 100 -FSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSA-REIPILSDELQLKMQLL 157 ++ L+ + + + G T L LS E + Q +Q+ Sbjct: 97 PCERSRELFRRSSQYRICTGATFTLHDAGGMFSSLSLCNSGPQAEFERRMADQQGHLQMA 156 Query: 158 VRESLMALMRLNDEIVMTPEM---NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFH 214 + L+ L + PE S RE +L+W GK EIA+I +ISE TV FH Sbjct: 157 LIRFHGRLLSLRAMDELFPEPQTGPLSARELGVLKWVMMGKAYREIAVICAISERTVKFH 216 Query: 215 QKNMQKKINAPNKTQVACYAAATGLI 240 N+ K+ N Q A G++ Sbjct: 217 MSNISGKLQVCNAKQAVYEAQRQGIL 242 >UniRef50_D2M390 Transcriptional regulator, LuxR family n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2M390_RHOPA Length = 218 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 77/210 (36%), Gaps = 8/210 (3%) Query: 30 IELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFS 89 + + A L+ ++ P+ + YP+ W S+Y ++ IDPV+ Sbjct: 1 MAVTAAALDLSCFAYLALPQKLDGTPR--LMSTYPKEWTSHYLRSHYERIDPVIMQALRD 58 Query: 90 QGHLMWN-----DDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAR-EI 143 W L + L + A +G+R G T + + + ++F+ + Sbjct: 59 TEPFRWGIGSTERYLSPAQKRLLDEASQYGIRLGFTVPIHDGHGPVAAVTFAGNQREAQF 118 Query: 144 PILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMI 203 +QL+ + R + S RE E L W A GK++ +I I Sbjct: 119 ERFVTSNPRMLQLMAMFFHSHVRRKLASDLRVDGAALSAREFECLEWAARGKSAWDIGRI 178 Query: 204 LSISENTVNFHQKNMQKKINAPNKTQVACY 233 L IS +T + N + K+ Q A Sbjct: 179 LGISHHTAISYLNNAKAKLGVRTVVQAALR 208 >UniRef50_B2IHP8 Transcriptional regulator, LuxR family n=2 Tax=Beijerinckiaceae RepID=B2IHP8_BEII9 Length = 268 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 51/234 (21%), Positives = 88/234 (37%), Gaps = 5/234 (2%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 T LL + + + + E T Y + W+ +Y Sbjct: 34 TQLLDLEANLSERTLEEFAVFIQKYYELKNIFYICPSLPGRTITDPYILGTYSQEWIEHY 93 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWNDDL--FSEAQPLWEAARAHGL-RRGVTQYLMLP-N 127 + +N++ +DPV+N S + W + Q + A G+ R+G+T + P N Sbjct: 94 RERNYVNLDPVINVGARSLLPIDWAKLPRSSPKIQKFFGEATDFGVGRQGLTIPVRGPTN 153 Query: 128 RALGFLSFSRCS-AREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKE 186 + E EL M + ++ + +KRE E Sbjct: 154 GLWALFCMTTDDTQAEWQARHYELIRDMVHVAHFIQQRAFEMHHQDEGIDINTITKREIE 213 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L W+AEGKT +I++++ IS+ TV H + + K+ A N+ A GLI Sbjct: 214 ALSWSAEGKTLEDISVLMRISQETVKAHLDSARYKLGALNRIHAVAKAIRAGLI 267 >UniRef50_A7IQ01 Autoinducer-binding domain protein n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IQ01_XANP2 Length = 233 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 94/240 (39%), Gaps = 18/240 (7%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWV 68 W + + T + + + Q L +D Y+ PV ++ +NY W Sbjct: 4 WFQRLTDVSSLACTEQALKEALAELVQDLGFDGYAYLNVQPV-----RIFAVSNYASEWQ 58 Query: 69 SYYQAKNFLAIDPVLNPENFSQ--------GHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120 + Y +N+ IDPV+ L + + A G+R G++ Sbjct: 59 ARYLTQNYAMIDPVVTMAKAQMKAFAWAAAAP----RSLSKPLRRFYSEASDFGIRSGIS 114 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 + L L+ + + +D Q+ V + + + + E + E++ Sbjct: 115 IPVRTAFGHLSMLTLASHKPSL-NLETDIDQIAAVTAVAQLHAKMEQQDAEPTASVEIDL 173 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 ++ L+W+AEGKT +IA I +S TVNFH N +K ++A + Q A LI Sbjct: 174 KAKQALCLKWSAEGKTMKDIASIEGMSFATVNFHLNNARKALDAGSLAQATALATKLKLI 233 >UniRef50_Q216V3 Transcriptional regulator, LuxR family n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q216V3_RHOPB Length = 242 Score = 180 bits (458), Expect = 3e-44, Method: Composition-based stats. Identities = 45/231 (19%), Positives = 90/231 (38%), Gaps = 4/231 (1%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQA 73 L + + TA++++H + + + + + YP WV Y Sbjct: 10 LEKIRVAATADDLHHVLRHICEAYQLAHAVFHATDTPAVRAERPLLILTYPAEWVENYTR 69 Query: 74 KNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGL-RRGVTQYLMLPNRAL 130 +++ IDPV+ L W+ D + + + A G+ R G+T + P+ Sbjct: 70 RDYFKIDPVVAIGRVGFLSLDWSTIDQKTASSAKFFREADEFGVGRHGLTTTVRGPSGER 129 Query: 131 GFLSF-SRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILR 189 + S +A + D + Q++ M + SKREK+ + Sbjct: 130 SLFTVTSNANAAQWTRQRDACIHEFQIIANHFHQRAMISTGLRGGDGPLPLSKREKQCIE 189 Query: 190 WTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 A+G +IA +L +SE+ + + + ++K+ A +Q A + LI Sbjct: 190 LLAKGFLPKQIAALLDLSESAIRLYLCSARRKLQASTTSQAIAIALSLELI 240 >UniRef50_Q7CWE0 Transcriptional regulator, LuxR family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7CWE0_AGRT5 Length = 245 Score = 180 bits (456), Expect = 5e-44, Method: Composition-based stats. Identities = 53/240 (22%), Positives = 96/240 (40%), Gaps = 12/240 (5%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 + + +A+ V E ++ ++Y+ + R + P+ W+ Y Sbjct: 6 QFISACSQAGSADRVRSEFAKLIREYGFEYFLVSRRMTGELASAGQILAEHLPDGWLEVY 65 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWNDDL--------FSEAQPLWEAARAHGLRRGVTQYL 123 +AK + +DPV W + L A + A +GL+ G + Sbjct: 66 RAKKYNLVDPVRKVIGMVHKPFQWKEALEGLPRAMHRKRASVFFHDAGRYGLQGGYAFPV 125 Query: 124 MLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMN---F 180 +G + F R++P L EL V L+ L P+++ Sbjct: 126 HGRAGFIGAV-FIGGPDRQLPSLHVELLDAATRAVFWRLLDLSGQAHGFSNAPDVSALEL 184 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 ++RE E+L A+G TS EI LSIS +TV+++ +Q++ +A N+ A GL+ Sbjct: 185 TRREMEVLALMADGMTSTEIGRQLSISNHTVDWYINGIQRRFSAKNRQHTVALAFRHGLL 244 >UniRef50_Q1QFH8 Transcriptional regulator, LuxR family n=3 Tax=Bradyrhizobiaceae RepID=Q1QFH8_NITHX Length = 231 Score = 179 bits (455), Expect = 6e-44, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 82/235 (34%), Gaps = 13/235 (5%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPF---TRPKVAFYTNYPEAWVSY 70 + ++ TA E+ + A + + + P + +P W+ Sbjct: 1 MEAVEQTRTAAEIEDCLLGLAAEFGFTGLFGGIVPTRPAPLAELRSRILFQRFPAQWLDR 60 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYLML 125 Y K ++ DP++ + W++ S + + A GLR G + Sbjct: 61 YSRKGYVFRDPIIQHLFHERTPFTWHEGYKSCPQRSNVRLIQGEAAEFGLRDGYVVPIST 120 Query: 126 PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREK 185 + + LSF L + L + N + RE Sbjct: 121 IDGEIVSLSFGGPGTLPASADLSVLNFAASYALGRHLHRIA-----TWRRVNSNLTAREW 175 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + L W EGKT+ EI+ IL IS++TV H + K+ A +K A T L+ Sbjct: 176 DCLLWAGEGKTNWEISAILGISKSTVTKHIMAARAKLGAVSKAHAIAMAIRTKLL 230 >UniRef50_C8SNG6 Transcriptional regulator, LuxR family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SNG6_9RHIZ Length = 240 Score = 179 bits (455), Expect = 6e-44, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 95/245 (38%), Gaps = 12/245 (4%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 M D D F + R + + ++ L + L +++ L + Sbjct: 1 MIDSDVF----EFVERCRAHTAPGPLLDDVLLTVRNLGFEHLILSGVPLGGQKLAPMVEL 56 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGL 115 +PE W Y A+D V + +W D ++ + A G+ Sbjct: 57 NGWPEGWFKRYVEAEHAAVDGVCIYSAKTLKPFLWADVPAKWSDTKGSRRVAGEATEFGI 116 Query: 116 RRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT 175 G ++ + LSF+ ++ LS ++++ + + MA+ L+ + Sbjct: 117 SSGFAVPMLSVHHWQSVLSFASS--AKVCALSPREEVQLVTMAVYAGMAIQALSHGDEVE 174 Query: 176 PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 E ++REKE+L W A GKTS+E + IL ++E TV +H ++ TQ A Sbjct: 175 -EGLLTEREKEVLLWAAAGKTSSETSQILGLAERTVKWHATRAREAFGVATTTQAIVEAV 233 Query: 236 ATGLI 240 +I Sbjct: 234 RRRMI 238 >UniRef50_A6UE86 Regulatory protein LuxR n=4 Tax=Rhizobiales RepID=A6UE86_SINMW Length = 246 Score = 179 bits (455), Expect = 7e-44, Method: Composition-based stats. Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 9/238 (3%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 L + M+T EE+ E E + +D+Y + + ++ +PE W Y Sbjct: 8 QFLALLEEMKTREEILPEFERLLDRCGFDFYGVVRQPKPHENPLRLLLAGRWPEGWPQIY 67 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWNDDL--------FSEAQPLWEAARAHGLRRGVTQYL 123 K ++ IDP + +Q W D L + + AR HGL G + Sbjct: 68 IRKKYVVIDPTIRFLGHAQRGFRWRDTLVAFRSDPHRKRMESMMIEARNHGLFDGYIFPV 127 Query: 124 MLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMAL-MRLNDEIVMTPEMNFSK 182 +G L+ P+ + L + L + E+V E+ ++ Sbjct: 128 HGRRGLMGNLTVGGRVVDLSPVELSLFDAIAKRLFWKLLELTDPEIMAELVSRVEVQMTR 187 Query: 183 REKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 RE E L + A+G TS +I +L IS +TV+++ +Q+K+ A N+ V A GLI Sbjct: 188 REMEALHYLADGMTSNDIGKVLDISSHTVDWYMNGIQEKLKAKNRHHVVALAFRLGLI 245 >UniRef50_A9D313 Putative AHL-dependent transcriptional regulator n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D313_9RHIZ Length = 239 Score = 179 bits (454), Expect = 9e-44, Method: Composition-based stats. Identities = 52/228 (22%), Positives = 89/228 (39%), Gaps = 4/228 (1%) Query: 16 RFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKN 75 F + + V + + + + + + T Y WVS Y +N Sbjct: 11 AFDSVRSCRTVEEAVFAFRAEYQVAHATYHLAQTTISALDSAYVRTTYSAEWVSRYLQRN 70 Query: 76 FLAIDPVLNPENFSQGHLMWND-DLFSEAQPLWEAARAHGLR-RGVTQYLMLPNRALGFL 133 ++ IDPVL Q W++ ++ + PL+E A AHGL G + ++ N L Sbjct: 71 YVDIDPVLKEGVQRQLPFDWSELEMSAAVLPLFEDALAHGLGPSGYSIPIIDKNFRRALL 130 Query: 134 SF-SRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTA 192 S S + L + + M+ ++ S RE E L A Sbjct: 131 SINSFETGEAWSDLVNRHKAAWAEAAFLIHDMAMKEIHGGNDQ-ALHLSPREIECLTLAA 189 Query: 193 EGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 GK +IA+IL +S +TV + K+ + K+ + N Q A + +I Sbjct: 190 RGKDHKDIALILGLSGHTVQGYLKSARHKLGSVNIPQAIAEAIRSRII 237 >UniRef50_B6R4Z6 Transcriptional regulator, LuxR family protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R4Z6_9RHOB Length = 254 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 48/239 (20%), Positives = 88/239 (36%), Gaps = 13/239 (5%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPF--TRPKVAFYTNYPEAWVS 69 + + + E+ A++L ++ + + + + +N+ + WV Sbjct: 17 QFSQELWNCSSLQARWEELTRFAEKLGFEKGAYIIVPKIEGRVEDRQPICLSNHSQDWVE 76 Query: 70 YYQAKNFLAIDPVLNPENF-SQGHLMWND----DLFSEAQPLWEAARAHGLRRGVTQYLM 124 +Y + ++ DP ++ + +W D + R+ GL+ GVT L Sbjct: 77 HYNSHHYYFKDPGMDHLLSGRKVDQLWTDYTVRPTSKVDSDFFNDVRSAGLKFGVTIPLE 136 Query: 125 LPN-RALGFLSFSRCSAR--EIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFS 181 N +G SF+ C ++ V ++ F+ Sbjct: 137 CSNKHLVGGASFASCERTQLGFDAQMTSNYPVLKGAVHLFHTYAQE---PETLSEFFGFT 193 Query: 182 KREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 RE E L W G+ + EIA IL++SE TV H K KK+ N+T A L+ Sbjct: 194 PREHECLLWLTAGRANKEIAHILNLSEKTVEHHIKRACKKLRVTNRTHAVARAMTFQLL 252 >UniRef50_B3PCB5 Putative two-component transcriptional regulator, LuxR family n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PCB5_CELJU Length = 238 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 54/238 (22%), Positives = 98/238 (41%), Gaps = 11/238 (4%) Query: 10 RRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVP--FTRPKVAFYTNYPEAW 67 + + + +++ E + +D L + P + F NYP W Sbjct: 3 MEDYICETNNSKNIQSLFNLFEKYMSDIGFDRVILGLMTDHPRLKKEAEHGFLKNYPADW 62 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWNDD-----LFSEAQPLWEAARAHGLRRGVTQY 122 V Y + ++ IDPV + + G W++ L ++ ++ A L GV Sbjct: 63 VERYFDQKYVHIDPVRHKAYDAIGAYTWDELKASMQLSNKQIQMFNEAEDARLFNGVGVS 122 Query: 123 LMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSK 182 + P A+ + + L+ ++ L+ + RL ++ V ++ + Sbjct: 123 MRGPGGAIAAVGAACSVKNG--NLNKDILDAANLMSVQFYTCYWRLMEKKVTL--VHLTA 178 Query: 183 REKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +E+EIL W+A G T ++IA L IS +TV+FH +N K+ A N T A LI Sbjct: 179 KEQEILTWSAAGYTKSQIAHKLCISVHTVDFHVRNCLAKLEAQNITHAVSRALNLSLI 236 >UniRef50_Q2NS60 Transcriptional activator n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NS60_SODGM Length = 240 Score = 178 bits (452), Expect = 1e-43, Method: Composition-based stats. Identities = 49/208 (23%), Positives = 83/208 (39%), Gaps = 7/208 (3%) Query: 40 DYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDL 99 D ++ ++YP W++ Y+ + IDPV+ W ++ Sbjct: 32 DLFTFAYFMMNKDDGQPAFMISDYPAGWLNQYRNYGYQKIDPVMLIACRKFTPFSWKNNP 91 Query: 100 FSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSA-REIPILSDELQLKMQLLV 158 Q ++ + + L G T L P+ L L+ S+ + ++ + K Q+L+ Sbjct: 92 NMPDQNFYKMSSDYALDNGYTFTLHDPDNNLATLTISQMKQNAVFYDIIEKEKDKFQMLL 151 Query: 159 RESLMALMRL------NDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVN 212 + ++R S REKE+L W + GKT EI+ ILSI E TV Sbjct: 152 ITTHEKVIRFFDARKEQGSESEEEPCRLSPREKEVLFWASVGKTYNEISTILSIREGTVK 211 Query: 213 FHQKNMQKKINAPNKTQVACYAAATGLI 240 FH +N+ K+ N A L+ Sbjct: 212 FHIRNIINKLGVANAKHAITRAMELKLL 239 >UniRef50_Q1GMP0 Transcriptional regulator, LuxR family n=2 Tax=Ruegeria RepID=Q1GMP0_SILST Length = 239 Score = 178 bits (452), Expect = 1e-43, Method: Composition-based stats. Identities = 53/232 (22%), Positives = 87/232 (37%), Gaps = 8/232 (3%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQ 72 +L + EE+ + ++ D+ S V+ + P AW Y Sbjct: 10 ILELIESSANLEEIGEVLAQFRNLVDLDHVSYRWVDRSGS----VSGCSTLPTAWQDRYS 65 Query: 73 AKNFLAIDPVLNPENFSQGHLMWNDDLFSE--AQPLWEAARAHGLRR-GVTQYLMLPNRA 129 A ++ IDPV+ + + W D +S A + + A G+ G + + P Sbjct: 66 AMSYHRIDPVVIGCYTAFHPVDWRDLDWSARLASAYRKDSIAFGVGNQGYSVPVRGPAGQ 125 Query: 130 LGFLSFS-RCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEIL 188 LS + C + + + LL + TPE S RE E L Sbjct: 126 YAILSITKSCEGEVWDKFTQKHSRDLILLAHYVNRRALEFEVSYYPTPEQPLSMRESEAL 185 Query: 189 RWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 AEG + A A ++ISE+T+ + + + K+ A N T A GLI Sbjct: 186 SLLAEGMSRARAAEAMAISEHTLRVYIEGARSKLQAQNTTHAVARAVTMGLI 237 >UniRef50_D2U307 Quorum-sensing transcriptional activator n=1 Tax=Arsenophonus nasoniae RepID=D2U307_9ENTR Length = 257 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 54/229 (23%), Positives = 94/229 (41%), Gaps = 17/229 (7%) Query: 26 VYHEIELQAQQLE-YDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLN 84 + + ++ + + Y + + P ++ TNYP+ WV Y+ +N+ IDPV+ Sbjct: 27 IKNYLDRELAVFGEFRYAYIILNKRNP---AELFAITNYPDQWVEIYKERNYQQIDPVVI 83 Query: 85 PENFSQGHLMWNDDLFSEA----QPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSA 140 W++ L + +++ ++ + + G T L N L LS S+ Sbjct: 84 FALNRVSPFEWDESLSINSNVDFSKIFDISKDYNVVNGYTFVLHDYNNRLAMLSIMMVSS 143 Query: 141 REIPILSDELQL--KMQLLVRESLMALMRLNDE-------IVMTPEMNFSKREKEILRWT 191 + I + + +L+ + + L E + + FS RE EIL W Sbjct: 144 EVVEIKKKIKEHKNDLHMLLLDVHEKITSLYREMIRQNYQNPASGKECFSPRENEILYWA 203 Query: 192 AEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + GKT +EIA IL I TV FH ++ KK+ N LI Sbjct: 204 SMGKTYSEIATILGIKLGTVKFHIGSVVKKLGVMNAKHAIRLGVELQLI 252 >UniRef50_Q2NWB5 Transcriptional activator protein n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NWB5_SODGM Length = 245 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 53/230 (23%), Positives = 85/230 (36%), Gaps = 17/230 (7%) Query: 23 AEEVYHEIE---LQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAI 79 E++ ++ Q + + Y+ K Y+NYP+ WV Y Sbjct: 17 TAEIHDLLQHEMNINQPIRFAYFIFNK-----SQDEKPVIYSNYPKEWVEKYMKNKLYKQ 71 Query: 80 DPVLNPENFSQGHLMWNDDLFSEAQP----LWEAARAHGLRRGVTQYLMLPNRALGFLSF 135 DPVL + W + F + + ++ + + + RG T L L LS Sbjct: 72 DPVLLVASQKIMSFPWQKNYFKKTKHQKSNIFAQSSEYNITRGYTFPLHDHENNLAMLSL 131 Query: 136 SRCSAREI-----PILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRW 190 S + D L L + L + + E + RE E L W Sbjct: 132 YTESDPDQLMKCISDHEDRLYLLFLSIHNRFLAEKAQQTNTSNTKIEKRLTSREIEALHW 191 Query: 191 TAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + GKT EIA+I+ I+E+TV FH N+ K++ N A L+ Sbjct: 192 ASIGKTYREIAIIMGITESTVKFHIGNLIVKLDVINAKHAIKKATDLHLL 241 >UniRef50_Q1GPX8 Transcriptional regulator, LuxR family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GPX8_SPHAL Length = 250 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 50/231 (21%), Positives = 91/231 (39%), Gaps = 8/231 (3%) Query: 15 LRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAK 74 + + ++ + + + +D ++L + +YP +W Y Sbjct: 11 DSILTASSIDHLHEALTRATRDMGFDRFALSLEIGCGADSSTSLLIHDYPASWADVYIGF 70 Query: 75 NFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYLMLPNRA 129 N A DPV S W + + + +E R HGL G T LP Sbjct: 71 NLAASDPVRRAAERSVLGFGWRNILDLVPMTEIEKTTFETGRRHGLADGFTVPRHLPGDV 130 Query: 130 LGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILR 189 G SF + IP + + ++L ++ + +L+ + + + R+++ + Sbjct: 131 TGSCSFVTGLGKSIP---HAMLIVAEMLGAMAIASARQLSGWTSRSVQPRLTDRQRDCVL 187 Query: 190 WTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 W A GKT EI+ IL IS TV H K+ +++ + + YA GLI Sbjct: 188 WAARGKTDWEISRILDISHETVIQHLKDARERYETHKRASLILYALYDGLI 238 >UniRef50_Q28T92 Transcriptional regulator, LuxR family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28T92_JANSC Length = 243 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 95/233 (40%), Gaps = 11/233 (4%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQ 72 ++ + + + ++ + S +PE W+ Y Sbjct: 7 IMEQIRTAPSRRALWQIMLDFMHDEGVVMGSYHFVD--ADAASVRVAADGFPEEWICEYL 64 Query: 73 AKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYLMLPN 127 + IDP+ W++ ++ + RA GL G+ Y+ P Sbjct: 65 NRKLALIDPIPALAARMSRPFYWHEIQDLIPPSAQTDAYLDRLRASGLGDGLAFYVFGPG 124 Query: 128 RALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEI 187 ++ R + L E ++Q + + + + L+D+ E S REK++ Sbjct: 125 LRNAYVGLGF--GRPVVDLPPEQIFRLQCVAQAGHLRVCELSDQ--APKEAALSPREKQV 180 Query: 188 LRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L W A+GK+++ IA IL++S +TV+ H +++ +K++ ++T A +G++ Sbjct: 181 LDWIAKGKSNSVIAEILAMSPHTVDAHVRSIYRKLDVTDRTSAALRGVGSGVL 233 >UniRef50_C6B8S2 Transcriptional regulator, LuxR family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6B8S2_RHILS Length = 236 Score = 176 bits (448), Expect = 4e-43, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 89/245 (36%), Gaps = 14/245 (5%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 M F ++ + + A+ ++ ++ H K Sbjct: 1 MHGSSLFDR---LIDATVAAANEHSLKTALSDVARAHGFERFAYLNLHT-----AKSFAV 52 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEA-----QPLWEAARAHGL 115 + Y + W S Y +++++AIDPV+ + W+ D + ++ A G+ Sbjct: 53 STYQKEWQSLYFSRSYMAIDPVVTAAKRLRRAFRWSADFERRRADDGIKEFYDTAAEFGI 112 Query: 116 RRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT 175 R G++ + L+ + E D+L + A ++ Sbjct: 113 RSGLSIPIWTGFGQFAILTLASARHLETSG-PDDLDTVGAAGAAALIHARLQGTTTPTQR 171 Query: 176 PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 P+ FS RE LRW AEG IA + ++ +TV + ++ K+ + Q A+ Sbjct: 172 PDFIFSDREALCLRWAAEGLPMHSIADVTGLTYHTVRWDLDRVKAKLGVYTQKQAVAVAS 231 Query: 236 ATGLI 240 GLI Sbjct: 232 RFGLI 236 >UniRef50_A9D281 Probable transcriptional regulator protein, LuxR family n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D281_9RHIZ Length = 237 Score = 176 bits (446), Expect = 6e-43, Method: Composition-based stats. Identities = 54/237 (22%), Positives = 95/237 (40%), Gaps = 12/237 (5%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTR-PKVAFYTNYPEAWVS 69 + R + T E+ ++ + ++ ++S+ R K +N P ++ Sbjct: 5 EDLFQRLKTATTEHELAVSLQALTSEFDFRFFSIFDIPATFSDRLSKHIRLSNLPSEYIE 64 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMW------NDDLFSEAQPLWEAARAHGLRRGVTQYL 123 Y + N L+ V S + + E Q + H + GV + Sbjct: 65 EYDSLNLLSNSSVFAMLRQSTAPMTRFLDLAVKERPTEEQQVMRAVFEKHNMTMGVYFPV 124 Query: 124 MLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKR 183 N ++F P LS + L V + A ++ ++ T + R Sbjct: 125 HGSNGRRAAMAFYGT----RPALSFAETGVLGLCVLHAFDAYSKMTNK-TGTKANGITTR 179 Query: 184 EKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E E+L W A GKTS EIA ILS+S++TVN + + +K++ N+TQ+ A LI Sbjct: 180 ELEVLHWAANGKTSTEIAAILSLSDHTVNTYMNSAMRKLDCVNRTQLVAKALRLHLI 236 >UniRef50_P54293 Transcriptional activator protein esaR n=7 Tax=Enterobacteriaceae RepID=ESAR_ERWST Length = 249 Score = 175 bits (443), Expect = 1e-42, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 90/238 (37%), Gaps = 16/238 (6%) Query: 17 FQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNF 76 + + + I+ + L Y+ V V ++YP+ W+ Y+A NF Sbjct: 6 LENQTITDTLQTYIQRKLSPLGSPDYAYTVVSK--KNPSNVLIISSYPDEWIRLYRANNF 63 Query: 77 LAIDPVLNPENFSQGHLMWNDDLFSEAQ----PLWEAARAHGLRRGVTQYLMLPNRALGF 132 DPV+ W++++ + ++ ++ + + G T L L Sbjct: 64 QLTDPVILTAFKRTSPFAWDENITLMSDLRFTKIFSLSKQYNIVNGFTYVLHDHMNNLAL 123 Query: 133 LSFSRCSAREIPIL--SDELQLKMQLLVRESLMALMRLNDEIVMTPEMN--------FSK 182 LS + + Q MQ+L+ + + RL FS Sbjct: 124 LSVIIKGNDQTALEQRLAAEQGTMQMLLIDFNEQMYRLAGTEGERAPALNQSADKTIFSS 183 Query: 183 REKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 RE E+L W + GKT AEIA I IS +TV FH KN+ K+ N Q LI Sbjct: 184 RENEVLYWASMGKTYAEIAAITGISVSTVKFHIKNVVVKLGVSNARQAIRLGVELDLI 241 >UniRef50_C5B5L7 Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B5L7_METEA Length = 296 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 62/260 (23%), Positives = 96/260 (36%), Gaps = 29/260 (11%) Query: 7 FSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEA 66 + +++ + L A + ++ +S V T + + Sbjct: 38 LQDLDDAMTAVDGARCVQDLGEILHLTATKAGFESFSFLNGATVASTSESIIM--TVSKD 95 Query: 67 WVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSE--------AQPLWEAARAHGLRRG 118 W Y ++ FL +DP L S MW+D A+ EAAR HG G Sbjct: 96 WQDTYFSEGFLDVDPCLMRALTSNSSFMWSDIELPPVVNGKVPGARRTMEAARDHGYVDG 155 Query: 119 VTQYLM------LPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEI 172 + L P + L F + R +P +S + +L L L+ ++ Sbjct: 156 LVLPLHLVDTKGSPYNSFCSL-FWKEDERLLPEVSRRYGHYLHMLAMLWEQKLQDLSPQL 214 Query: 173 V------------MTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQK 220 S RE+++L W A GKT+ E A+IL +S TVN H QK Sbjct: 215 STGMLGSISVLGNARSTKALSGRERDVLAWAAHGKTAGETALILGLSMETVNHHLGKAQK 274 Query: 221 KINAPNKTQVACYAAATGLI 240 K+ A NKT A G+I Sbjct: 275 KLMAANKTHAVAIAINRGVI 294 >UniRef50_Q3K6H8 LuxR family regulatory protein n=1 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3K6H8_PSEPF Length = 235 Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 4/234 (1%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWV 68 W+ + + R + E + + A + + + + V P + K N+ +AW Sbjct: 4 WKEYQIKQLTRAKEIESAFPILRTFANNIGFQFCGIQVSRPESPSF-KPFHINNFTKAWN 62 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQ-YLMLPN 127 N+ DP+ + + S +WN FS+A +W A R HG+ G +Q YL N Sbjct: 63 EE-YENNYSEEDPITSYCHQSMLPFLWNRKAFSKAPQMWNALRNHGMEHGWSQSYLNEEN 121 Query: 128 RALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR-LNDEIVMTPEMNFSKREKE 186 +S +R + + + M + + + L P + S RE E Sbjct: 122 DLCCTISLARPQSEIFALELYDQYGVMHFITQHLSELFVHALPPVPAKPPPVRLSTRELE 181 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 I+R A GKT+ EI IL+++E TVN+H KN+ K+NA NK A+ G + Sbjct: 182 IVRLCAYGKTAWEIGQILNVAERTVNYHIKNLIVKLNACNKMSAIVKASKLGFL 235 >UniRef50_A6U6L8 Regulatory protein LuxR n=3 Tax=Rhizobiaceae RepID=A6U6L8_SINMW Length = 286 Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 92/248 (37%), Gaps = 14/248 (5%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTR-PKVAF 59 M D D R+ET ++ + Q + + +C V R Sbjct: 44 MTDID-LPRGGDFASEIARLETQFDIIRYMRRITQIFGFKTFLICSIPAVEVERLSATTV 102 Query: 60 YTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHL-----MWNDDL--FSEAQPLWEAARA 112 +N P ++ Y + + L + + W + A + R Sbjct: 103 ISNMPAELLNKYDSLSMLRFSTGVRRLRETTTPFQILLEDWEKEGGKPDAAADYFAMLRE 162 Query: 113 HGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEI 172 +GL + + G + A L +++Q++ L + + Sbjct: 163 NGLLQANYFPVHDAEGGRGAVILMGPEAG----LPMTAAMELQMIAIHVYNRLAEI-GSV 217 Query: 173 VMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVAC 232 S+RE + L WTA GKTS+EIA IL +SE+TVN + ++ KK++A N+TQ Sbjct: 218 WKNTNTVLSEREIQCLNWTAAGKTSSEIAGILGLSEHTVNHYLNHVTKKLDAVNRTQAVV 277 Query: 233 YAAATGLI 240 A G I Sbjct: 278 KAMKKGYI 285 >UniRef50_A3SQM2 Autoinducer-binding transcriptional regulator LuxR n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SQM2_9RHOB Length = 251 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 85/246 (34%), Gaps = 17/246 (6%) Query: 8 SWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAW 67 T+L R + +E + L+ D C ++ + P W Sbjct: 7 ERLTTILSRLDTEAGLSSLPATVEALRRALKVDQILFCSSTGPDRSQN----WHTLPPGW 62 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGLR-RGVTQYLM 124 + Y + + IDPV W D A+ L A AHG+ +G T Sbjct: 63 TARYAQQGYHRIDPVRAEAQRRVTPFDWRPLDWQRPAARALRADAVAHGIGPQGFTIPAH 122 Query: 125 LPNRALGFLSF-SRCSAREIPILSDELQLKMQLLVRESLMALMRLNDE---------IVM 174 PN L LS + L+ + + L +M D Sbjct: 123 GPNGQLALLSITADRDDATWTDLTRANRFALILAAHALHHKIMSQPDAGLGEDPDSAAAT 182 Query: 175 TPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 P S RE +++ A G + +IA L+ISE+T+ + + + K+ A N A Sbjct: 183 PPAPRLSPRETDVITLLARGDSRGQIATKLAISEHTLRSYIETARHKLGAVNTPHAVARA 242 Query: 235 AATGLI 240 A G+I Sbjct: 243 IAMGMI 248 >UniRef50_A2SMG0 Putative LuxR-family transcriptional regulator n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SMG0_METPP Length = 237 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 54/230 (23%), Positives = 87/230 (37%), Gaps = 4/230 (1%) Query: 15 LRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAK 74 +E E+ A++L ++ S P + N P+A+ + Sbjct: 7 QSVLEARNRDEFRGEVVRFAKRLGFETVSAITVVDHPVGDTEFVAIDNAPDAYKDAIEDP 66 Query: 75 NFLAIDPVLNPENFSQGHLMWNDD--LFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGF 132 +DPV+ ++W+ + + +WEA G R G+ L +P Sbjct: 67 KAGQLDPVMQHCKRQSVPIIWDQSTYVSAGQGSMWEAQARFGFRTGICLALHMPEGRHFV 126 Query: 133 LSFSRCSA-REIPILSDELQLKMQLLVRESLMALMR-LNDEIVMTPEMNFSKREKEILRW 190 + R A + L +QL + MR L E + + RE + LRW Sbjct: 127 IGVDRDQALPKDRGEVTRLVADLQLFAVHAQDTAMRVLVPERLQLERPKLTPRELDSLRW 186 Query: 191 TAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 T +GKT+ E+ I+ ISE T H N K+ NK Q A GL+ Sbjct: 187 TMDGKTAWEVGSIMGISERTAVLHINNAMHKLACTNKHQAVLKALRLGLL 236 >UniRef50_Q46751 Transcriptional activator protein carR n=4 Tax=Enterobacteriaceae RepID=CARR_PECCC Length = 244 Score = 173 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 57/228 (25%), Positives = 101/228 (44%), Gaps = 14/228 (6%) Query: 24 EEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVL 83 E++ I+ + + + ++S + ++P +NYPEAW+ Y K DP++ Sbjct: 3 HEIHSFIKRKLKGVGDVWFSYFMMSKNSTSQP--YIISNYPEAWMKEYIKKEMFLSDPII 60 Query: 84 NPENFSQGHLMWNDD----LFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCS 139 W+D+ L ++ Q ++ ++ H + G T L + + LS + Sbjct: 61 VASLARITPFSWDDNDIVTLRAKNQDVFISSVQHDISSGYTFVLHDHDNNVATLSIANHL 120 Query: 140 AR---EIPILSDELQLKMQLL-VRESLMALMRLNDEIVMTPEMN----FSKREKEILRWT 191 E + + E L+M L+ V E +MA R ++ P+ + S RE E+L Sbjct: 121 EDANFEKCMKNHENDLQMLLVNVHEKVMAYQRAINDQDNPPDNSRNALLSPRETEVLFLV 180 Query: 192 AEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 + G+T E++ IL ISE TV FH N +K++ N A L Sbjct: 181 SSGRTYKEVSRILGISEVTVKFHINNSVRKLDVINSRHAITKALELNL 228 >UniRef50_A5G659 Transcriptional regulator, LuxR family n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G659_GEOUR Length = 250 Score = 173 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 55/247 (22%), Positives = 92/247 (37%), Gaps = 13/247 (5%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVR---HPVPFTRPKV 57 + K ++ E + +D+ + H T + Sbjct: 7 ILSKKDCFLLLEIVNSCVSCSNVTEAGSIANKTRDLIGFDHAVYGLAKLNHHGCITAYET 66 Query: 58 AFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDL--FSEAQPLWEAARAHGL 115 ++ YP W+ Y+ NF +DP+ + W D + AA L Sbjct: 67 LNFS-YPAEWLDAYRTNNFHLLDPITTENFKNYSLQYWKDTFNTYDVEAKFLSAALDFRL 125 Query: 116 RRGVTQYLMLPNRALG-FLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR-LNDEIV 173 G + R G S S +E +L + LL A + L+ E Sbjct: 126 VDGYAIGITNSFRTEGCIFSISGPIKKE-----PRNELVLNLLAPHLHQAFRQVLSVEKK 180 Query: 174 MTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 + RE+E+L W +GK+S +I+ IL+ISE TV FH N+ +K++A ++ Sbjct: 181 GKISTTITIREREVLNWIKKGKSSWDISTILAISERTVKFHVDNVMRKLDAVSRIHAVAV 240 Query: 234 AAATGLI 240 A + GLI Sbjct: 241 ALSVGLI 247 >UniRef50_Q9F5D3 Riorf119 protein n=2 Tax=Agrobacterium rhizogenes RepID=Q9F5D3_AGRRH Length = 224 Score = 173 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 89/230 (38%), Gaps = 15/230 (6%) Query: 18 QRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFL 77 + + ++ A ++ ++ + ++ + +YPE W Y ++ Sbjct: 3 EAAHDERMIKSALKSFANSHGFERFAYLQTEAL-----EIRTFNSYPEEWQDIYLGSHYS 57 Query: 78 AIDPVLNPENFSQGHLMWNDDLFSEA-----QPLWEAARAHGLRRGVTQYLMLPNRALGF 132 IDPV+ W D + + + A HG+R G+T + + Sbjct: 58 RIDPVITEAKRRMETFSWTADDWPARGSSELRRFRDQAIEHGIRSGLTIPVEGSFGSTMM 117 Query: 133 LSFSRCS--AREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRW 190 L+F+ A +L + + L + L + ++ P+ S RE L W Sbjct: 118 LTFASSEKKAENGKVLDGQKATRAVLAIHY---RLKIIAATTIVAPKRLLSPREAMCLMW 174 Query: 191 TAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 A+GK++ E AM+ I+ TV + ++K++A + A GL+ Sbjct: 175 AAKGKSAPETAMLTGINARTVQHYLDKAREKLDAATVPHLVAIAKDHGLV 224 >UniRef50_P55407 Probable transcriptional activator protein traR n=9 Tax=Rhizobiaceae RepID=TRAR_RHISN Length = 236 Score = 173 bits (439), Expect = 4e-42, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 98/237 (41%), Gaps = 15/237 (6%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 R+++ + + + + A YD ++ + +V + +YP W S Sbjct: 8 RSLIDMLEAAQDGHMIKIALRSFAHSCGYDRFAYLQKDGT-----QVRTFHSYPGPWESI 62 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEA-----QPLWEAARAHGLRRGVTQYLML 125 Y ++ IDPVL + W D + + + A +HG+R GVT + Sbjct: 63 YLGSDYFNIDPVLAEAKRRRDVFFWTADAWPARGSSPLRRFRDEAISHGIRCGVTIPVEG 122 Query: 126 PNRALGFLSFSRCSA--REIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKR 183 + L+F+ +L + +++ ++V L + + V+ P+ S R Sbjct: 123 SYGSAMMLTFASPERKVDISGVLDPKKAVQLLMMVHY---QLKIIAAKTVLNPKQMLSPR 179 Query: 184 EKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E L W ++GKT++ A + I+ TV + + K++A + Q+ A GL+ Sbjct: 180 EMLCLVWASKGKTASVTANLTGINARTVQHYLDKARAKLDAESVPQLVAIAKDRGLV 236 >UniRef50_Q7NQP7 Transcriptional activator, LuxR/UhpA family of regulators n=2 Tax=Chromobacterium violaceum RepID=Q7NQP7_CHRVO Length = 265 Score = 173 bits (439), Expect = 4e-42, Method: Composition-based stats. Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 12/226 (5%) Query: 20 METAEEVYHEIELQAQQLEYDYYSLCVRH---PVPFTRPKVAFYTNYPEAWVSYYQAKNF 76 +ET E+ ++ Q D L + R + +YP W++ Y +NF Sbjct: 34 IETEGELKAFLDNILSQAPSDRIILVLGRLNNQNQIQRMEKVLNVSYPSDWLNQYSQENF 93 Query: 77 LAIDPVLNPENFSQGHLMWNDDLFS----EAQPLWEAARAHGLRRGVTQYLMLPNRALGF 132 DP++ + QG ++W + E + A ++G+ G+T +G Sbjct: 94 AQHDPIMR-IHLGQGPVIWEERFSRAKGSEEKRFIAEASSNGMGSGITFSAASDRNNVGS 152 Query: 133 LSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEM-NFSKREKEILRWT 191 + + P + L + L A +R+ + +P S+RE +I W Sbjct: 153 I---LSIGGKEPGRNAALVAMLNCLTPHLHQAAVRIANLPPASPSNMPLSQREYDIFHWM 209 Query: 192 AEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAAT 237 + GKT+ EIA IL+ISE TV FH N+ +K+NA N+T Sbjct: 210 SRGKTNWEIATILNISERTVKFHVANVIRKLNANNRTHAIVLGMHL 255 >UniRef50_Q19U14 Transcriptional activator AlpR n=1 Tax=Azospirillum lipoferum RepID=Q19U14_AZOLI Length = 234 Score = 173 bits (439), Expect = 4e-42, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 97/234 (41%), Gaps = 10/234 (4%) Query: 10 RRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFT---RPKVAFYTNYPEA 66 +T + + + ++ E A +L Y +Y+ P P A NYP Sbjct: 5 IQTFVEQAGDDTDEDALFRRFESAATELGYPFYAFGALWGDPDAIKLNPAPAVRLNYPAE 64 Query: 67 WVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLP 126 WV++Y + + IDPV+ ++Q + W++ ++ A GLR G+ L Sbjct: 65 WVAHYFSTGYNKIDPVVLVAPYAQTSVTWDELRSYR-PEFFDDAATFGLRSGIAIPLRAI 123 Query: 127 NRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKE 186 L + R + + + +++L A RL + + + + + Sbjct: 124 QGCY-VLCVASGDDRP---IRPKERARLELFAHGLFAAYQRLRE--LPAQDHGLTANTVQ 177 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 ++R + G ++AEI L ++ + V++ K+ +KK+ N QV A G++ Sbjct: 178 VIRLSMAGLSTAEICSRLKLTMDGVHWCLKDARKKLKCANTAQVYLKAIQQGIV 231 >UniRef50_Q161C2 Transcription regulator, LuxR family, putative n=2 Tax=Roseobacter RepID=Q161C2_ROSDO Length = 248 Score = 173 bits (438), Expect = 5e-42, Method: Composition-based stats. Identities = 50/240 (20%), Positives = 95/240 (39%), Gaps = 9/240 (3%) Query: 7 FSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHP-VPFTRPKVAFYTNYPE 65 F + + ++ E++ + S +P ++P YPE Sbjct: 4 FRTLNDFVSCCRDTKSVTELWRNGLDFFYARKIKMVSYHSDDAQLPGSKPLGIVSDGYPE 63 Query: 66 AWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDD-----LFSEAQPLWEAARAHGLRRGVT 120 WV Y +DP+ + W++ L E + + GL GV Sbjct: 64 GWVCEYLQSELFRVDPIPQLASILSRPFRWSEAPKLMRLSPEGERYMQTLAQSGLGDGVA 123 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 + PN ++ ++ P L+ + ++Q + + + L E + Sbjct: 124 MQVYGPNMRNAYVGLGF--GKQDPDLTADEIFELQCAAQIAHIRYCELT-EFRQRVAESL 180 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 S RE EIL+W A GK+++ IA IL IS +TV+ + + +K++ ++T A +GL+ Sbjct: 181 SPREVEILQWIARGKSNSVIAEILGISRHTVDTITRRIFEKLDVNDRTTAAIRGLGSGLV 240 >UniRef50_Q1NCQ8 Putative uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NCQ8_9SPHN Length = 256 Score = 173 bits (438), Expect = 6e-42, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 98/243 (40%), Gaps = 9/243 (3%) Query: 4 KDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNY 63 + +L +++ + EE+ + A ++ + +++L P+ RP +Y Sbjct: 6 GQLAALADDLLRALRKVASREELAALMTCLASEIGFRHFALIHHDPLAGERPDRVDIRDY 65 Query: 64 PEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDD-----LFSEAQPLWEAARAHGLRRG 118 P A V + L DPV+ FS G +W+D + + E HGL G Sbjct: 66 PAAIVDRLFDQGQLRRDPVIRGCLFSDGAFLWSDLDKIITFTRQDRHSLEFGAGHGLNEG 125 Query: 119 VTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR-LNDEIVMTPE 177 +T +L +G +F+ + P L+ Q+ + A R L ++ P Sbjct: 126 ITVPHVLLGECIGSCTFAGATD---PQLASRYLGFAQITGIFAFQAARRMLLASPLIGPA 182 Query: 178 MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAAT 237 R ++ + G ++ EIA L ++ TV+ + ++ +A ++ ++ A Sbjct: 183 PRLHPRPRDCVVLAGRGFSNKEIARELGLTPRTVDGYLTEARRLFDAHDRAELVVSAVLA 242 Query: 238 GLI 240 G I Sbjct: 243 GEI 245 >UniRef50_A8GCU6 Transcriptional regulator, LuxR family n=2 Tax=Serratia RepID=A8GCU6_SERP5 Length = 238 Score = 173 bits (438), Expect = 6e-42, Method: Composition-based stats. Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 3/217 (1%) Query: 11 RTMLLRFQRMETAEEVY-HEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVS 69 + ++ + +V+ ++ AQ L ++Y+S V P +RPK+ N+PE ++ Sbjct: 6 QPLMDALLTSQPDRKVFLSQLAPCAQALGFEYFSYTVFSCYPASRPKMLIEGNFPECYLE 65 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRA 129 Y+ DPV+ + S W++ + + LW G+R G +Q + Sbjct: 66 DYRKLRVYLQDPVIEQAHHSTLQFYWDEHFYQDKPELWWRMAQFGIREGWSQSVKDCYGR 125 Query: 130 LGFLSFSRCSAR-EIPILSDELQLKMQLLVRESLMALMR-LNDEIVMTPEMNFSKREKEI 187 LG L+F+ S + P S + L + L L + + REK+I Sbjct: 126 LGILTFAGKSIPVQSPQASARNETFFLWLAQMVHKTLREALISVNDEAIKDVLTLREKDI 185 Query: 188 LRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINA 224 LRW +EGKTS E A+++ +SE TVNFH N KK++ Sbjct: 186 LRWCSEGKTSEETALLMGLSERTVNFHIGNSIKKLSV 222 >UniRef50_A9D0L4 Putative LuxR/GerE family transcriptional regulator n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D0L4_9RHIZ Length = 245 Score = 172 bits (437), Expect = 7e-42, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 90/248 (36%), Gaps = 13/248 (5%) Query: 1 MQDKDFF-SWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVR-HPVPFTRPKVA 58 M + D+ M R T ++ + Q +Y Y+ + + Sbjct: 2 MTECDYNQDRFEPMRQRLNNCTTQFDLLRLLREVTQFHQYTYFFIASGCDGATRSLADSI 61 Query: 59 FYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDD------LFSEAQPLWEAARA 112 T+ P V Y + P++ L D + L + + Sbjct: 62 IITSAPSDLVRRYDETGLMERSPLMRALGGRGTPLQCRLDETITAFTTEQQAALDDFSAE 121 Query: 113 HGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEI 172 + + + + F +S + ++ + L R++ + Sbjct: 122 FNIDCCFITPVYHRDHGPAAVCFLGK----RNQMSFSEAANLAMISSLAHQKLRRVSAQP 177 Query: 173 VMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVAC 232 + ++RE+E L WT+ GKTS EIA ILS+SE+TVN + N +K++A N+TQ Sbjct: 178 SKA-DSPLTERERECLVWTSSGKTSVEIARILSLSEHTVNHYLNNAARKLDAVNRTQAVA 236 Query: 233 YAAATGLI 240 A G I Sbjct: 237 LAIRQGFI 244 >UniRef50_C5AK35 Autoinducer-binding domain protein n=2 Tax=Burkholderia RepID=C5AK35_BURGB Length = 273 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 1/212 (0%) Query: 18 QRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFL 77 +R +T E + + A++L + Y +P + P+ N+P AW A Sbjct: 49 ERGDTPESLLDAVLPIARRLGFAYLEYFFNTSLPVSAPRKLVIGNFPPAWSRREGADEVS 108 Query: 78 AIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSR 137 +P++ S + W++ F+ G+ G +Q + G L+ +R Sbjct: 109 EANPIIARCKSSMMPMAWDEASFASHPDFRAMLARAGIGGGWSQLVRDGAGNWGVLTVAR 168 Query: 138 CSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVM-TPEMNFSKREKEILRWTAEGKT 196 + R + E + ++ L L ++ + + ++ EK ILRWT +GKT Sbjct: 169 TACRYAGAMEVEAEAQLLWLAHIVHSRLCQMLRPPMTGANRVLLTEMEKTILRWTVDGKT 228 Query: 197 SAEIAMILSISENTVNFHQKNMQKKINAPNKT 228 S E+A IL +S TVNFH +N+ K+N NKT Sbjct: 229 SGELAEILQVSARTVNFHVQNILAKMNTCNKT 260 >UniRef50_B8IHS1 Transcriptional regulator, LuxR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IHS1_METNO Length = 242 Score = 171 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 80/239 (33%), Gaps = 12/239 (5%) Query: 10 RRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVS 69 + + + A ++ Y + + + + Y WV Sbjct: 7 FQRFVDEIHAASDEGGLVGAASRMADRMGYRWIAYLSMTD----AQEHEITSTYAPPWVE 62 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYLM 124 +Y A N+ IDP + W ++ L++ AR++G+R G+T ++ Sbjct: 63 HYFANNYEQIDPCVLASREQSQPFRWGSLGPPIEIPENVLRLYDDARSYGIRAGITIPIL 122 Query: 125 LPNRALGFLSFSRCSAREIPILS--DELQLKMQLLVRESLMALMRLNDEIVMTPEMNF-S 181 P+ + + + + D L M ++ + L+ + Sbjct: 123 GPSGRWSAFTMATDESETEALARQTDYLTSMMTMMALQFHARLLITAPRFSAETRPKLLT 182 Query: 182 KREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + L+ A G+ A L ++ TV H +K++ A N T A GLI Sbjct: 183 DVQARCLQAVANGEPMKVAAHELGLTHRTVIHHLNMARKRLGAKNITHTVKTAFHLGLI 241 >UniRef50_UPI00018738D8 transcriptional activator of quorum sensing autoinducer synthesis transcription regulator protein n=1 Tax=Pseudomonas syringae pv. tomato T1 RepID=UPI00018738D8 Length = 185 Score = 171 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 58/181 (32%), Positives = 83/181 (45%), Gaps = 1/181 (0%) Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT 120 NY W YQ NF+ DP L S ++W++D F + L+ + L G Sbjct: 5 NNYDPQWNENYQIHNFVESDPTLQHGFKSNEPMLWSEDTFKDHTLLYGEMKKFNLNYGWL 64 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLND-EIVMTPEMN 179 Q + A G ++ SR + D + KM LVR + L + P Sbjct: 65 QSSWYNSAAKGVVTLSRSTEAITLKELDAKEAKMSKLVRLTHACLSEIITLSPPYNPLEK 124 Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 S RE E+L+W A+GKT I +L ++E TV H N+ +K+NA NKT A AA G+ Sbjct: 125 LSTREVEVLKWVADGKTGEVIGKVLGVTERTVTHHTVNIMQKLNATNKTAAAVKAALLGI 184 Query: 240 I 240 I Sbjct: 185 I 185 >UniRef50_B2VEE0 Transcriptional activator protein n=1 Tax=Erwinia tasmaniensis RepID=B2VEE0_ERWT9 Length = 240 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 61/228 (26%), Positives = 88/228 (38%), Gaps = 15/228 (6%) Query: 26 VYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNP 85 + ++E L + + TNYP WV Y+ K DPV+ Sbjct: 11 ISKQLEAALSDLG--EFIWAYVVLSKKDMSCIFGVTNYPGEWVKQYREKGLQYTDPVVIT 68 Query: 86 ENFSQGHLMWNDDLFSEA----QPLWEAARAHGLRRGVTQYLMLPNRALGFLSF-----S 136 W+++L + + L++ AR G+ G T L N L LSF Sbjct: 69 SLNRLTPFAWDENLLAGSGFRFSKLFDRAREFGVTNGYTFVLHDYNNNLVTLSFTFTPEC 128 Query: 137 RCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVM----TPEMNFSKREKEILRWTA 192 R A E I + + V E+ + L L+++ F++RE EIL W + Sbjct: 129 RAEATETFIKNKGEISLLLASVHETYLTLTSLSEKNASRSRSENASRFTERENEILYWAS 188 Query: 193 EGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 GKT E AMIL I TV FH N+ KK+ N LI Sbjct: 189 VGKTYPETAMILGIKTCTVKFHMSNIVKKLGVANARHAIRLGMELQLI 236 >UniRef50_C5ADX8 Acylhomoserine lactone dependent transcriptional activator n=1 Tax=Burkholderia glumae BGR1 RepID=C5ADX8_BURGB Length = 241 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 72/202 (35%), Gaps = 6/202 (2%) Query: 42 YSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLF- 100 ++ + F ++YP Y+ + +DPV+ S W + Sbjct: 36 FAYVMIDKNSLELG--CFLSSYPIRLQQEYRRRALHRVDPVVLHAIQSVAPFSWAEAFRQ 93 Query: 101 ---SEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLL 157 + R GL G + P + +G LSF R E L Sbjct: 94 QRVPDPSEFDALRREFGLHDGYVFTVHDPYQYVGMLSFFNRGGRPEFRAEIERVKGAMQL 153 Query: 158 VRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKN 217 + + + + RE+ +L+W A GK+ +EIA I I E TV +H N Sbjct: 154 ALVLFHSRINAKPPDSRHRVESLTLRERTVLKWAAMGKSYSEIADICGIRERTVKYHMAN 213 Query: 218 MQKKINAPNKTQVACYAAATGL 239 + +K++ Q A+ GL Sbjct: 214 VVQKLDVSTAKQAVIVASRLGL 235 >UniRef50_Q11FX6 Transcriptional regulator, LuxR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11FX6_MESSB Length = 265 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 93/236 (39%), Gaps = 12/236 (5%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKV---AFYTNYPEAWVS 69 + T EEV H + + Q+ + P +R + +PE W Sbjct: 33 FTEAMRGCRTTEEVNHSLMIFLQRYGVTSLIAGMIPPSNSSRREQLSYVLLDGWPEEWKR 92 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYLM 124 Y + +L DP ++ H W++ + + + AR LR GVT Sbjct: 93 RYFSLGYLHRDPAIHLVRRGCPHFHWSEIREHCSVCPIGRRIMNEAREFQLRAGVTFSFP 152 Query: 125 LPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKRE 184 +F A E L++ +Q + L + L +V ++ S+R+ Sbjct: 153 TLESK----TFGFLVAAEELDLAETDLFTLQFVAAFGLGCALTLAGGVVGRSNVHLSRRQ 208 Query: 185 KEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +E++ W +EG T+ EIA L++S +T + H + ++ ++ N A GLI Sbjct: 209 REVVAWASEGLTADEIAERLNVSVHTADMHLRAVRTRLGVANTVHAVAEALRLGLI 264 >UniRef50_A3SSF6 Transcriptional regulator, LuxR family protein n=3 Tax=Rhodobacteraceae RepID=A3SSF6_9RHOB Length = 248 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 83/234 (35%), Gaps = 9/234 (3%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRH-PVPFTRPKVAFYTNYPEAWVSYY 71 + + + ++ ++ A+ ++ + A P + Y Sbjct: 10 FTECLREVSSVSALWLLVQRFAKAQDFRTVTYHSIDVQSLGDTSFGAVAIGIPAEFHRMY 69 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWNDD-----LFSEAQPLWEAARAHGLRRGVTQYLMLP 126 ++ DP W D L + + AR G G+ + P Sbjct: 70 TEEHLYLDDPFPPFAASQITPFFWRDLPQLTTLTEKQKAYLNRAREFGFADGLVCQVFGP 129 Query: 127 NRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKE 186 +S R P +D L + + + + M L P S RE E Sbjct: 130 QARNALVSIGFHPDRPRP--TDAEVLDLHVASQFAHMRFCALVAGPAA-PNRRLSPRELE 186 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +LRW A GK++ IA I+ +S +TV+ + + K++ ++T+ A A GLI Sbjct: 187 LLRWIARGKSNTSIAQIMGVSRHTVDTIMRRLFGKLDVTDRTRAAVRGLAFGLI 240 >UniRef50_Q1NBZ0 Transcriptional regulator, LuxR family protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NBZ0_9SPHN Length = 248 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 92/236 (38%), Gaps = 10/236 (4%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 + ++ A + + + + + +Y+L + V YP+ WV Sbjct: 9 QDFCAVAGAIKDATALSDLMAEITKAMGFRHYALVHHVDLKPAVRSVHIVD-YPQDWVER 67 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYLML 125 +QA+ A DP+ + + W+ L + + + A GL G T + Sbjct: 68 FQARRLYASDPIHRASHRTNVGFAWSAVQSIISLTAADRSILAEAYEAGLGDGFTVPAHI 127 Query: 126 PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPE-MNFSKRE 184 P G SF+ + +L +QL+ + A +++ E + ++R+ Sbjct: 128 PGELNGSCSFAMAAGE---MLDHRQLPFVQLVGSFAFEAARKISRIHAPQSECPSLTERQ 184 Query: 185 KEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E + A GKT EI+ IL I + TV H K+ + + +T +A A G I Sbjct: 185 AECVALVARGKTDWEISQILGIGQETVIQHVKDARDRYGVTKRTLLAIRALFEGQI 240 >UniRef50_C5B5L8 Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B5L8_METEA Length = 265 Score = 170 bits (430), Expect = 5e-41, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 94/265 (35%), Gaps = 28/265 (10%) Query: 2 QDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYT 61 +F + L +T+ ++ ++ A + +D ++ + T Sbjct: 1 MTINFGNDFFDGLAAIDAAKTSADLPGILQATASKAGFDSFAFLDGRAETSVGGR--IIT 58 Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEA-------QPLWEAARAHG 114 AW Y +N A DP + S W+D + E + AAR G Sbjct: 59 TVAPAWQETYARENLAAHDPCVRRVAESNSPFFWSDIVLPEDDRRPDLTRMTMTAARDMG 118 Query: 115 LRRGVTQYLMLPN----RALGFLSF--SRCSAREIPILSDELQLKMQLLVRESLMALMRL 168 G+ L + + R L LS + S ++ +++L L L Sbjct: 119 YYDGLVMPLHMADANGVRMLSSLSLFWADGSEDVRRVIGPRGPAVVKMLAAAWAQKLSDL 178 Query: 169 NDEIVMT-------------PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQ 215 + + RE ++L W A+GKT+ E ++IL++ TV+ H Sbjct: 179 GEAEAKPVQSPAKVLTGLFGRPPKLTSREVDVLSWAAKGKTADETSVILALGRETVHTHL 238 Query: 216 KNMQKKINAPNKTQVACYAAATGLI 240 N +K+ A NKT A LI Sbjct: 239 SNACRKLQASNKTHAVAMAVHRRLI 263 >UniRef50_C6B9S9 Transcriptional regulator, LuxR family n=11 Tax=Rhizobiaceae RepID=C6B9S9_RHILS Length = 275 Score = 169 bits (429), Expect = 6e-41, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 87/255 (34%), Gaps = 17/255 (6%) Query: 3 DKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRH-----PVPFTRPKV 57 D T+ +F ET + + +Q+ ++ P + Sbjct: 8 DDPILDDIGTIRRQFTAHETLDGRIDQAFEAMKQIGFEALIYDYTPVPYDLDGAIMIPSL 67 Query: 58 AFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDD----------LFSEAQPLW 107 N + Y+ + + IDPV + WN D + + P+ Sbjct: 68 LKLRNISDDMHDYWFNRGYFRIDPVQQVALRTSAPFFWNYDPDADTLINRFMTEDTAPVT 127 Query: 108 EAARAHGLRRGVTQYLMLPNRALGFLSFSR-CSAREIPILSDELQLKMQLLVRESLMALM 166 + GVT + +P ++ R ++ + LL Sbjct: 128 RYLSERDMSTGVTVPVHMPRGDYATVTGIRFGRNKDFERHALRYIADFNLLAHVFHETAY 187 Query: 167 RLNDEIVMT-PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAP 225 L D + + ++RE+E LR +AEG ++ EI+ I+ S TV H KK+ A Sbjct: 188 SLFDTRAKSVGTIRLTERERECLRHSAEGYSAKEISRIIDRSVPTVVMHLNAATKKLGAR 247 Query: 226 NKTQVACYAAATGLI 240 N+TQ A L+ Sbjct: 248 NRTQAVVRATHYRLL 262 >UniRef50_B2SK12 Transcriptional regulator AhyR/AsaR family n=15 Tax=Xanthomonas RepID=B2SK12_XANOP Length = 254 Score = 169 bits (429), Expect = 7e-41, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 85/243 (34%), Gaps = 17/243 (6%) Query: 15 LRFQRMETAEEVYHEIELQAQQLEY-----DYYSLCVRHPVPFTRPKVAFYTNYPEAWVS 69 Q +T + L + DY + + P V N P Sbjct: 10 RDLQASQTVNSCLDRVFRDVCALGFQSLVYDYAPVPLSMEGALITPTVFMQRNAPGDMQH 69 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSE----------AQPLWEAARAHGLRRGV 119 + + DPV +W+ + + + G+ GV Sbjct: 70 VWCEHGYYQHDPVQQRATRRNTPFVWSYRTDGDCAGVEYVGGQHRQVTRYLCDSGMGTGV 129 Query: 120 TQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMR--LNDEIVMTPE 177 T L LP A S + + + E QL LL+ + A + L+ + Sbjct: 130 TVPLHLPGGAFATFSAAIDAVAAEALRLAESQLLPFLLLAHAFQARAQELLDPQERRCHH 189 Query: 178 MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAAT 237 + ++RE+E L+++A+G TS IA L+ S TVN H + +K+ A N+ + Sbjct: 190 IPLTRRERECLQYSAKGLTSKRIAAALNRSTATVNLHLNSAARKLGARNRVEAVVRGMHY 249 Query: 238 GLI 240 L+ Sbjct: 250 RLL 252 >UniRef50_B4RHX3 Transcriptional regulator, LuxR family n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RHX3_PHEZH Length = 252 Score = 169 bits (429), Expect = 7e-41, Method: Composition-based stats. Identities = 54/240 (22%), Positives = 92/240 (38%), Gaps = 11/240 (4%) Query: 3 DKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTN 62 + D + Q++E+ E+ + L D + R + Sbjct: 5 EHDIARRAFDTINDAQQVESIPELEAVFAKTLEPLGVDVFVGVQIADPLRERHVEVTFGR 64 Query: 63 YPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND------DLFSEAQPLWEAARAHGLR 116 AW ++Y+A+ A DP++ S L W+D L + + E AR+ GL Sbjct: 65 THAAWQAHYEAQGHAARDPIVREMLRSTEPLFWSDLPARRGALKPDEARVMEEARSFGLN 124 Query: 117 RGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRE--SLMALMRLNDEIVM 174 G+ L G +S + + + + + LL SL +R ++ Sbjct: 125 EGLMTPLH---HVDGSVSAVLMMGERLASDAPDTRAALHLLSIYYGSLARKLRQRNDGGE 181 Query: 175 TPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 + S R+ E LRW EGK+S I ILS+S TV+ H + +K+ + Q A Sbjct: 182 PQKAKLSARQIECLRWAREGKSSYVIGQILSLSARTVDEHLASACRKLGVHTRMQAVAQA 241 >UniRef50_A9CI30 Transcriptional regulator, LuxR family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=A9CI30_AGRT5 Length = 238 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 88/238 (36%), Gaps = 10/238 (4%) Query: 8 SWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAW 67 + + + ++ Y + +L + W Sbjct: 5 ERQARLCRDLSAAADKSQWLEALQEVMHAFGYAHVTLLRLPGGQNAFALPLVVESSLPVW 64 Query: 68 VSYYQAKNFLAID-PVLNPENFSQGHLMWNDDLFSEAQPLWEAAR----AHGLRRGVTQY 122 V K+ D PV+ S W+ + A A + G+ G+ Sbjct: 65 VVNAMTKDGALGDCPVIKRGASSMMPQYWSLEDPEMACGSLVDAVNSVGSMGITSGLMVP 124 Query: 123 LMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSK 182 + + ++F+ + L ++ ++ +L RL P +K Sbjct: 125 VNGMSGNRHLMNFAG----DRDTLPQASLNELCMIALHALETYDRLCRVASKGP-SPLTK 179 Query: 183 REKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 RE +++RWTA+GKTS EIA +LSISE+TVN + N +K++ N+TQ+ LI Sbjct: 180 RELDVVRWTAQGKTSVEIAELLSISEHTVNTYMNNAMRKLDCVNRTQLVAKTIRLRLI 237 >UniRef50_B9JSF3 Transcriptional regulator LuxR family n=5 Tax=Rhizobium/Agrobacterium group RepID=B9JSF3_AGRVS Length = 230 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 50/234 (21%), Positives = 94/234 (40%), Gaps = 12/234 (5%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRH-PVPFTRPKVAFYTNYPEAWVSYYQ 72 + +T +V+ ++ + + T + TN+P ++S Y Sbjct: 1 MRELSGYKTQFDVFRLMKRLTDFFGAKGFMVMNVPSAGAKTLTGSSVITNWPADFLSEYD 60 Query: 73 AKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQ--PLWEAARA----HGLRRGVTQYLMLP 126 + L+ P+ N + ++++ + + + E A G+ RG + Sbjct: 61 MASLLSSSPMFNRLRNTSIPVVFDVHVVARERDPKTVELATDLFLRFGMPRGACFPVHDA 120 Query: 127 NRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKE 186 + G ++ E+P S + +Q L L + + E ++RE E Sbjct: 121 HGNRGAVNICG----EMPAFSFVDMVLLQYLAGHVFNRLAEIRELDARVTE-TLTEREIE 175 Query: 187 ILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L WTA GKTS EIA I+ +SE+T+N + +K++ N+TQ A LI Sbjct: 176 CLTWTAAGKTSVEIAEIMGLSEHTINHYLNRATRKLDTVNRTQAVAKALRLSLI 229 >UniRef50_D0DE55 Regulatory protein, LuxR n=1 Tax=Citreicella sp. SE45 RepID=D0DE55_9RHOB Length = 253 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 84/249 (33%), Gaps = 18/249 (7%) Query: 10 RRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTR-----PKVAFYTNYP 64 ++ R + Q Q + +D V P V N Sbjct: 5 IESIRNRLSEGSHLGQRVDAAFRQMQGVGFDGMIYDYTPMVSGPGADVPIPSVFEQRNLG 64 Query: 65 EAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDD----------LFSEAQPLWEAARAHG 114 + ++ ++ +DPV S W+ D L + +P+ R Sbjct: 65 DEMRQHWSEDEYIRLDPVQRVAMRSAAPFCWSYDSDIDSIIRPMLTPDIEPVMSYLRERE 124 Query: 115 LRRGVTQYLMLPNRALGFLSFSRCSARE-IPILSDELQLKMQLLVRESLMALMRLN--DE 171 + GVT + LPN ++ R+ + + L+ + + L D Sbjct: 125 VFSGVTVPIHLPNGDFATVTGVSLGRRQNWSGGTSRAIADLSLIAHLFNQSAVELLGFDH 184 Query: 172 IVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVA 231 T E+ + RE+E L + + G ++ E A I+ S TV H +K+ A N+T Sbjct: 185 EDGTQEVRLTPRERECLTYASFGNSAKETARIIDRSVPTVVMHLNAAMRKLGARNRTHAV 244 Query: 232 CYAAATGLI 240 A LI Sbjct: 245 TIATRRRLI 253 >UniRef50_A5P6H4 Transcriptional regulator, LuxR family protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P6H4_9SPHN Length = 217 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 8/219 (3%) Query: 26 VYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNP 85 ++ + + ++ ++ V R ++ + +P+AW Y++ IDP Sbjct: 1 MFEILRRYFAEFGFEAFAYMVPSKTEPGRIEMDAF-GFPDAWAETYRSAEMDTIDPFPRY 59 Query: 86 ENFSQGHLMWND----DLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAR 141 S L + E + E AR HG+ G+ + LG F+ + Sbjct: 60 VARSGRPLRLTEISAQAQSKEQKAFLEQAREHGITDGLIIPTFGIRQNLGV--FAIGQVK 117 Query: 142 EIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIA 201 ++ +L +Q + + + + + N S RE EIL W A GKT++EIA Sbjct: 118 DLKVLERASVFALQAVAQAAHTQM-EMLASRADGLRTNLSNRETEILHWIALGKTNSEIA 176 Query: 202 MILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 IL I TV + K + K++ +++ A A G+I Sbjct: 177 TILGIGGPTVATYIKRVFDKLDVKDRSSAAVKAIRWGII 215 >UniRef50_C4RYA9 Transcription regulator SdiA n=1 Tax=Yersinia bercovieri ATCC 43970 RepID=C4RYA9_YERBE Length = 238 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 58/230 (25%), Positives = 102/230 (44%), Gaps = 4/230 (1%) Query: 15 LRFQRME-TAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQA 73 F R++ + E + + ++S +R P T ++ + NY ++W + Y+ Sbjct: 9 ESFNRIDVSEETLQQISNYITLNTGFSFFSFVIREIYPITESRIYTFDNYNDSWRTLYEK 68 Query: 74 KNFLAIDPVLNPENFSQGHL-MWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGF 132 IDPV+ + Q +W+ F + +W +G + G+T + LP Sbjct: 69 NKLWKIDPVIFYKPMPQLEYAVWDSLFFKGHEEIWAYGVEYGYQSGITFGMPLPQGYHSI 128 Query: 133 LSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVM--TPEMNFSKREKEILRW 190 LS S S P Q + + + +++ + + + +KRE IL + Sbjct: 129 LSLSNMSHSITPKEISLAQSYFSKICVKIINSIILNAESPITFNKNNITLTKRELMILMF 188 Query: 191 TAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + +G TS EIA + IS++TV+FH N+ KK+N NK Q A GLI Sbjct: 189 SVDGMTSHEIAGKIFISKSTVDFHMLNIIKKLNCKNKFQAISKALIMGLI 238 >UniRef50_A9DE85 Probable transcriptional regulator protein, LuxR family n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DE85_9RHIZ Length = 246 Score = 167 bits (423), Expect = 3e-40, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 85/237 (35%), Gaps = 15/237 (6%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFT----RPKVAFYTNYPEAWV 68 + ++ T + + + Y+S+ + ++ +++P + Sbjct: 13 LYEPISKIRTTFDAIQVLRKTCLSYGFRYFSVLTIPAMVSESAQVMSHISVISSWPPELI 72 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAAR------AHGLRRGVTQY 122 + Y PVL L++ + + E A G+ GV Sbjct: 73 ADYDRLELGKNSPVLERLRKQITPLLFEVENIDSERDGAEQASAKELFTRFGVTMGVYFP 132 Query: 123 LMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSK 182 + + F L + LLV + T ++ + Sbjct: 133 VQDGRGQRFAVCFMGARKPLSATELPSLAMFATLLVDQLSQ-----ITANEDTAKLVLNA 187 Query: 183 REKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 RE E+L+WTAEGKTSAEIA I +SE+TVN + +K+ N+TQ A GL Sbjct: 188 RETEVLQWTAEGKTSAEIARITGLSEHTVNHYATIATQKLGCSNRTQAVVQAIRLGL 244 >UniRef50_Q6FD15 Putative transcriptional regulator, luxR family n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FD15_ACIAD Length = 246 Score = 166 bits (421), Expect = 5e-40, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 90/240 (37%), Gaps = 12/240 (5%) Query: 8 SWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTR---PKVAFYTNYP 64 L + ++ E+++ + AQ +++D +C P Y N+ Sbjct: 10 ELLFQTLRQIRQASKIEDIFDVVVEFAQNIDFDRLIICSIAPHGKEELIDEVFFVYGNWT 69 Query: 65 EAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDL----FSEAQPLWEAARAHGLRRGVT 120 + + + +L P+ W E + + G GV Sbjct: 70 DR-TNIEERNKYLRNCPITRHIFDYDEPFFWTKTFNKNNSKETYRVIKNISERGEESGVQ 128 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 + G +SF+ + L + + +Q + + + ++ Sbjct: 129 VPIFGRTGLEGAISFAGK----LSDLGADFRFILQSVCVTAFREIQSKRSLNLLRENSVL 184 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 ++REKEIL+WTA G+ +EIA IL ISE TV H ++++KK+ + Q A G I Sbjct: 185 TQREKEILKWTAVGRKQSEIAEILKISERTVENHLRSIRKKLEVKSTGQAIASALLKGEI 244 >UniRef50_B2IL02 Transcriptional regulator, LuxR family n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IL02_BEII9 Length = 255 Score = 166 bits (421), Expect = 5e-40, Method: Composition-based stats. Identities = 50/235 (21%), Positives = 87/235 (37%), Gaps = 9/235 (3%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 R ++ + H E L + +++L + + T+YP+ WV + Sbjct: 14 EYQRRIDSADSLCALSHLTEEMCLSLGFPWFTLIRGKQLAKRDDRSILLTSYPQDWVDHV 73 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYLMLP 126 + DPV + L WN+ L S E+AR HGL G T L L Sbjct: 74 LKEKRHLDDPVHFAASRLVNGLSWNEIGQYVTLNSRQIETLESARRHGLNTGFTIPLRLD 133 Query: 127 NRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT-PEMNFSKREK 185 S + R+ +++ E +L L+ + L ++ S R+ Sbjct: 134 GFENAMFSMA---KRKANVITSEERLLACLVGSVTFARAHALVTADAGIFTPVHLSPRQV 190 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + + A+G + EIA L IS TV + ++ + Q+A A G + Sbjct: 191 DCVALLAKGYSDFEIARQLGISPETVREYITKARRSYGVKRRFQLAILAVRDGYL 245 >UniRef50_A6F7D7 Transcriptional regulator, LuxR family n=1 Tax=Moritella sp. PE36 RepID=A6F7D7_9GAMM Length = 244 Score = 166 bits (420), Expect = 7e-40, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 100/247 (40%), Gaps = 12/247 (4%) Query: 1 MQDKDFFSWRRTMLLRFQRMET-AEEVYHEIELQAQQLEYDYYSLCVRHPVPF--TRPKV 57 M+DK+ + R + ++ + + + + + ++ + + F T + Sbjct: 1 MKDKNKLIKLLDIADTCIRANSNSDSISDILTKTNELIPFQAATIAIDTNIEFALTAKQQ 60 Query: 58 AFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSE---AQPLWEAARAHG 114 F N E W Y + F DP+L+ + + W + + ++ + Sbjct: 61 IFTQNLSEEWQEIYFQRKFFNQDPILSAIANTTSAVDWRTATSQANYISDDFKQMSKKYV 120 Query: 115 LRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVM 174 G++ + + +S + L E ++ + R + I Sbjct: 121 GSDGLSILVKTDVGST-LISLVIPESS----LDAEHNQLIEYIAPHIHEVFNRQGENIRK 175 Query: 175 TP-EMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 + + N SKRE E+L W EGK++ + ++IL+ISE TV FH N+ KK+ N++Q Sbjct: 176 SLWKPNLSKRELEVLNWAKEGKSNWDTSLILAISERTVKFHFSNIFKKLEVVNRSQAIAR 235 Query: 234 AAATGLI 240 A GL+ Sbjct: 236 AIHFGLV 242 >UniRef50_B9LZZ1 Transcriptional regulator, LuxR family n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZZ1_GEOSF Length = 248 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 94/250 (37%), Gaps = 15/250 (6%) Query: 1 MQDKDFFSWRR-----TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRP 55 M++ D S R ++ + + + ++ + + D + Sbjct: 1 MENTDCISKRDAVFLLELIHECVTCKNKTGIKNIVDSLSSLVAIDNAVFGIAQIGTNGLI 60 Query: 56 KVAFYTN--YPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFS--EAQPLWEAAR 111 + N YPE W+ Y+ KNF +DP+ + W D + AAR Sbjct: 61 QTYDVMNISYPEEWLITYKRKNFCQVDPIAKENFSNFELQFWEDTYKKWNPPKEFISAAR 120 Query: 112 AHGLRRGVTQYLMLPNRALG-FLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLND 170 L G+ + G S + + ++ L A Sbjct: 121 DFNLYNGIACGVRNLKSTEGSLFSVAGKLEN-----HPREKFIIENLTPHLHTAFTTYLS 175 Query: 171 EIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQV 230 + SKRE E+L W +GK+S +I++IL+IS TV FH +N+ K+NA ++T Sbjct: 176 KTKAPVNFELSKREIEVLNWVKKGKSSWDISVILAISVRTVKFHVENIMVKLNAVSRTHA 235 Query: 231 ACYAAATGLI 240 A + G+I Sbjct: 236 VAIALSAGVI 245 >UniRef50_A6U9S1 Regulatory protein LuxR n=3 Tax=Rhizobiaceae RepID=A6U9S1_SINMW Length = 246 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 88/247 (35%), Gaps = 11/247 (4%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 M ++ ++ + E + + + +P + Sbjct: 1 MTNQQAVLNLLDIVE-YGGCADPERFFALMRRT---FNIAHLLYLEAESLPDGLRICRLH 56 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDL--FSEAQPLWEAARAHGL-RR 117 + Y + IDP+L + W F E +PL+ AA GL Sbjct: 57 HTFGAYAAEVYAVRGLHRIDPILKLALGGVRPVEWATARRRFPECEPLFVAAEEIGLSTE 116 Query: 118 GVTQYLMLPNRALGFLSF-SRCSAREIPILSDELQLKMQLLVRESLMALMR---LNDEIV 173 GV L P + L+ + S E QL +++ + + Sbjct: 117 GVALPLPSPAGRMALLAISANMSPVEWSAYRRCHLRDFQLAANLFHASMLEHSAMAGAME 176 Query: 174 MTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 ++ + RE E+L W+A GK+ EIA IL ISE TV F N ++K+N + TQ + Sbjct: 177 DERDLRLTGRETEVLTWSAAGKSYWEIATILGISERTVRFFMTNARRKLNVVSNTQAVAH 236 Query: 234 AAATGLI 240 A LI Sbjct: 237 AVRHALI 243 >UniRef50_B2IKZ9 Transcriptional regulator, LuxR family n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IKZ9_BEII9 Length = 257 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 96/245 (39%), Gaps = 12/245 (4%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 + D +F +T + QR + E++ + L + Q+ + Y+++ RP Sbjct: 3 INDSEF----QTYVKNLQRAKNFSEIHDCVLLVSCQMGFSYFAITEHFNTQPKRPVPMSI 58 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGL 115 +YP+ W S ++ K +DPV N W++ + + + E AR +GL Sbjct: 59 VHYPKDWESLFRRKRLFGVDPVQRASNNRLRGFFWSEVPRMIPMSRQDHMILELARKNGL 118 Query: 116 RRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT 175 G T +P R G SF + E+ + + + + + L+ Sbjct: 119 GDGYTVPANIPGRYNGSCSFGMKVSEEVRLEF-KHLPLLDYIGTAAFEIAQSLHHGSAPG 177 Query: 176 --PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 + R+ + + A+G ++ EI L+I T H K+ ++ +T +A Sbjct: 178 ELDRPRLTDRQLDCVALLAQGLSTVEIGHALNIRYETAVQHIKDASQRYGVNRRTPLAVR 237 Query: 234 AAATG 238 A G Sbjct: 238 ALLDG 242 >UniRef50_D2TJP9 Quorum sensing transcriptional regulator CroR n=24 Tax=Enterobacteriaceae RepID=D2TJP9_CITRO Length = 230 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 88/219 (40%), Gaps = 9/219 (4%) Query: 26 VYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNP 85 + +E+ + + Y+ + + ++ N P+ W Y + + IDPV+ Sbjct: 15 IQNELNKVFEVYKDTTYAYAIVNK--KDPSQMRIINNNPQ-WFDIYLERKYQFIDPVIIR 71 Query: 86 ENFSQGHLMWNDDLFSEA----QPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAR 141 S W + + ++ + H + +G T L L LS Sbjct: 72 ALSSVEDFYWENKVLLSGGYNLTRIFNESSEHNIYQGHTFPLHDYLNNLVVLSIISHKDS 131 Query: 142 EIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIA 201 I + ++ M LV+ + L ++ + S RE++IL+W + GKT AE++ Sbjct: 132 GIDMTANR-SYFMHFLVQ-LHQKTLNLYSKVHQKKNVFLSPRERQILKWVSAGKTYAEVS 189 Query: 202 MILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +ILSI+E TV FH N KK+ N L+ Sbjct: 190 LILSITERTVKFHMSNAMKKLGVNNARHAVKLGMELRLL 228 >UniRef50_A5VH61 Regulatory protein, LuxR n=2 Tax=Sphingomonas RepID=A5VH61_SPHWW Length = 289 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 91/246 (36%), Gaps = 10/246 (4%) Query: 1 MQDKDFFSWRRT---MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKV 57 M D S ++ T ++V ++ +Q + +++L + T K Sbjct: 38 MSSLDDASRLGDITAFEAECRQATTLDQVKSLLDAIVRQFGFRWFALVHNVDLKRTTCKA 97 Query: 58 AFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARA 112 T YP W+ DPV + L W+ + + E RA Sbjct: 98 LLITTYPVRWIEEIMESRLYLEDPVHAACVKTVSGLSWDQIGDYIAPNARQLSILERGRA 157 Query: 113 HGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEI 172 HGL G T + + + + +R + I S +L + A L + Sbjct: 158 HGLASGFTMPIRMRDEPDAMFTVAR--QGDETISSPDLLCARLIGTVAFDQARTLLGPDE 215 Query: 173 VMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVAC 232 + + S R+ + + A+GK+ EI IL +S +TV+ + + +++ +TQ+ Sbjct: 216 LANVPIALSPRQIDCIDLVAQGKSDWEIGQILGLSRDTVHEYVEGARRRYGVRRRTQLVL 275 Query: 233 YAAATG 238 A G Sbjct: 276 RAVRDG 281 >UniRef50_B9JA22 Transcriptional regulator protein n=10 Tax=Rhizobium/Agrobacterium group RepID=B9JA22_AGRRK Length = 245 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 87/238 (36%), Gaps = 11/238 (4%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPV-PFTRPKVAFYTNYPEAW 67 + ++T +V+ ++ + + + F + N+P Sbjct: 12 RGEDYIDEIAGLKTQFDVFRFMKRVTDAYRCRAFMVVNLPSLTSFELQSNSVINNWPAEL 71 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAA---RAHGLRRGVTQY 122 ++ Y + L V S +++ + + + A + R + Sbjct: 72 LTVYDQEGLLRNSTVSRRLRVSTLPFVYDTAANTNRDDSKIQLRASLFERFRMARSICLP 131 Query: 123 LMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSK 182 + G + S + + E + + L + + V + + Sbjct: 132 THDASGIRGAVILSG----DREAFTAEETKDLCYIAIHVFDRLAEIRNLDVRIVD-TLTD 186 Query: 183 REKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 RE + L WTA GKTSAEIA IL++SE+TVN + KK++ N+TQ A GLI Sbjct: 187 RELDCLNWTAAGKTSAEIAEILTLSEHTVNHYLNRATKKLDTVNRTQAVAKALRVGLI 244 >UniRef50_B9JII6 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JII6_AGRRK Length = 244 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 46/229 (20%), Positives = 83/229 (36%), Gaps = 17/229 (7%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPF-------TRPKVAFYTNY 63 + L + + + L + ++ + P+ +N+ Sbjct: 16 QPFLHQLELCTDIHSLEAVFSKTLSHLGFPMFAYNIHRMSASFIMNESTVDPQNFIISNF 75 Query: 64 PEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSE-----AQPLWEAARAHGLRRG 118 P W+++ + + IDP L QG W+D L S+ + L + A GL G Sbjct: 76 PNKWLTHDFHQKYKEIDPTLKWVGTGQGIAQWSDLLTSDDIDKNQRRLLQEAWDAGLTNG 135 Query: 119 VTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIV----- 173 +T +M +S +Q+L + + Sbjct: 136 ITLPIMTELGEAVAISVVPEPGTGNNERILAALPIVQILAQGYHRKAKGILLGHSLKVGS 195 Query: 174 MTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKI 222 + S RE ++L W A GKT+ EIA ILSIS+ +V+F+ + K+ Sbjct: 196 ARRKSFLSPREIDVLHWMARGKTAWEIAEILSISQKSVDFYTDMAKTKL 244 >UniRef50_C6P1V2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1V2_9PROT Length = 690 Score = 163 bits (414), Expect = 4e-39, Method: Composition-based stats. Identities = 50/244 (20%), Positives = 94/244 (38%), Gaps = 15/244 (6%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVP-FTRPKVAF 59 M DF + E+ + +DY+ + T Sbjct: 1 MSHDDF--------KSLLEVRNEAELRQRAQEVVVGFGFDYFLYATGLKMENSTTSFTKV 52 Query: 60 YTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQP--LWEAARAHGLRR 117 T YP AW+ Y + + +IDP + + +W+ + F A ++E AR HG+ Sbjct: 53 ITTYPAAWIEKYVSAGYASIDPAVRHSMERRTPYIWSAEAFESAGAGLMFEDARHHGIVS 112 Query: 118 GVTQYLML-PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTP 176 G++ L + ++G + + R E ++ L A R+ + Sbjct: 113 GMSVPLFDSASNSIGGMGLA---CRSETCRGLEDIGRVVLFALYFQEAYSRIAVPFLHDE 169 Query: 177 EMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAA 236 + S++E L W ++G A+IA L++ E V + + K++A + Q +A A Sbjct: 170 DGVLSRQEGACLGWISDGLDVAQIAQRLALPEAEVQQLLEQVLHKLDASSLPQAVAHAFA 229 Query: 237 TGLI 240 GL+ Sbjct: 230 GGLL 233 >UniRef50_B6VM55 Similar to probable transcription regulator SdiA of Escherichia coli n=3 Tax=Photorhabdus RepID=B6VM55_PHOAA Length = 242 Score = 163 bits (413), Expect = 5e-39, Method: Composition-based stats. Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 18/228 (7%) Query: 23 AEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPV 82 EV+ I + + +SL ++ P + +V F+ NY E+W + Y + + IDP Sbjct: 23 VSEVFEIINKIS---GFSLFSLILKARFPISNREVYFFNNYHESWRNLYIERKYWMIDPT 79 Query: 83 LNPENFSQGHL------MWNDDLFSEA--QPLWEAARAHGLRRGVTQYLMLPNRALGFLS 134 L + + +W+ D FSE+ Q LW ++ HG R G+T L + G S Sbjct: 80 L-----NFRPVPPSFSKIWDLDFFSESNGQELWYVSQKHGFRSGITFGLPAFSGTYGIFS 134 Query: 135 FSRCSAREIPILSDELQLKMQLLVRESLMALMRLND--EIVMTPEMNFSKREKEILRWTA 192 + + ++ + + L + E +FS RE E+LR+TA Sbjct: 135 VAGKDGHIDNETMYKCSGEILGVYIRIIRYLTSHTKYLQFFYVDETSFSNRELEVLRYTA 194 Query: 193 EGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +G TS+EIA+ + ++++TV+FH N+ KK+ NK Q A G I Sbjct: 195 DGMTSSEIALTICVTKSTVDFHLMNIVKKLGCRNKFQAIAKAVLLGYI 242 >UniRef50_B5ZUI2 Transcriptional regulator, LuxR family n=8 Tax=Rhizobium RepID=B5ZUI2_RHILW Length = 240 Score = 162 bits (411), Expect = 7e-39, Method: Composition-based stats. Identities = 54/247 (21%), Positives = 93/247 (37%), Gaps = 16/247 (6%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTR-PKVAF 59 M+ + F+ + F T EV+ ++ Q L + + V F Sbjct: 1 MKLEAEFNRIEEVAAGFN---THYEVFKYMKGLTQDLGMTAFLIMTLPTVDFAEIGATKI 57 Query: 60 YTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQP------LWEAARAH 113 TN+P V YY A N + PV+ S ++ + + + + E + Sbjct: 58 ITNWPAEMVDYYDAHNLMVDSPVIRRMLRSTSPFNYDVEAINTDRGEGKKSTVIELFNRY 117 Query: 114 GLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIV 173 G+ +G + G +S S S K+ + L +L Sbjct: 118 GMEKGAYFPVHDAAGGRGAMSISGSRN-----FSMIEMAKLLFIATLIYDRLSQLTLNEK 172 Query: 174 MTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 P + F++ E + LR TA G+ AEIA +L ++EN VN H + KK+ +TQ Sbjct: 173 HKP-IEFTRNELDCLRLTAGGRKGAEIAKLLDLTENAVNNHIGSAIKKLGCTTRTQAVVS 231 Query: 234 AAATGLI 240 A ++ Sbjct: 232 ALRLNIL 238 >UniRef50_C4XN36 LuxR family transcriptional regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XN36_DESMR Length = 257 Score = 162 bits (411), Expect = 9e-39, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 91/236 (38%), Gaps = 11/236 (4%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTN--YPEAWVS 69 + ++ T E L + +D + + + N YP W+ Sbjct: 23 DITVKCLECSTEAEYKQIFALLNTIVPFDQSTSGLAKLSSDGAVESYELANINYPVEWLQ 82 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGLRRGVTQYLM--L 125 Y+ KNF ID ++ S W+ A+ A L G T Sbjct: 83 TYKEKNFSGIDVIVKRNFTSFTPQYWDHTYKAHKPAREFITLASDFNLIHGYTYGARPFG 142 Query: 126 PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF-SKRE 184 + SFS + P + +Q +V +A R+ + ++ S RE Sbjct: 143 FCKQASLFSFSGNFKKYDPTVIAI----LQTIVPHLHLASSRIIESRLIQHNRKLLSGRE 198 Query: 185 KEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +E+L W GK+S +I+ IL ISE TVN+H N+ KK++ N+ Q A G++ Sbjct: 199 REVLSWLKHGKSSWDISTILQISECTVNYHIYNIIKKLDVQNRPQAVAVATHLGIL 254 >UniRef50_P54294 Transcriptional activator protein traR n=14 Tax=Rhizobium/Agrobacterium group RepID=TRAR_AGRT5 Length = 234 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 75/220 (34%), Gaps = 11/220 (5%) Query: 26 VYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNP 85 + + A+ + Y+ TNY W S Y NF +DPV+ Sbjct: 21 LKDGLADLAEHFGFTGYAYLH-----IQHKHTIAVTNYHRDWRSAYFENNFDKLDPVVKR 75 Query: 86 ENFSQGHLMWNDD-----LFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSA 140 + W+ + L E + + A G+R G+T + N ++ + + Sbjct: 76 AKSRKHVFAWSGEQERSRLSKEERAFYAHAADFGIRSGITIPIKTANGSMSMFTLAS-ER 134 Query: 141 REIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEI 200 I + + V + + L + +E LRW A G T E+ Sbjct: 135 PAIDLDREIDAAAAAGAVGQLHARISFLQTTPTVEDAAWLDPKEATYLRWIAVGMTMEEV 194 Query: 201 AMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 A + + N+V + K+ + +K + A LI Sbjct: 195 ADVEGVKYNSVRVKLREAMKRFDVRSKAHLTALAIRRKLI 234 >UniRef50_B1KKQ1 Transcriptional regulator, LuxR family n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KKQ1_SHEWM Length = 250 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 65/252 (25%), Positives = 105/252 (41%), Gaps = 22/252 (8%) Query: 3 DKDFFSWRR--TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSL--CVRHPVPFTRPKVA 58 + F + ++ + F +++E+ ++ LE D +L + P + Sbjct: 7 SEHFLNIKQVSDVYHMFSSSSSSDEMMLCVKALQNLLEVDGVALINLILRPDHTITIERV 66 Query: 59 FYTNY-----PEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWE 108 + + W + YQ K F IDPV++ + W L E Sbjct: 67 VSSGFGFESKSVEWDNIYQKKKFQYIDPVVSCSASFRRSFNWASVPSMITLSEVQFNFLE 126 Query: 109 AARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRL 168 A+ GL+ G + + L+ + L+ E ++L+ S A+ RL Sbjct: 127 RAQEMGLKEGASIGSFSTRQIYKELTITSVCG---CSLNPEQLASLELINAVSAQAMKRL 183 Query: 169 NDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKT 228 + P + RE EIL W++EGK+S EI MI SI+E TV FH KN+ KK+N N+ Sbjct: 184 -----ILPAEKLTGRESEILAWSSEGKSSWEIGMICSITERTVKFHLKNIYKKLNVQNRA 238 Query: 229 QVACYAAATGLI 240 Q A GLI Sbjct: 239 QAIVCAIRLGLI 250 >UniRef50_A6U6L7 Regulatory protein LuxR n=3 Tax=Rhizobiaceae RepID=A6U6L7_SINMW Length = 246 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 91/232 (39%), Gaps = 18/232 (7%) Query: 19 RMETAEEVYHEIELQAQQLEYDYY-SLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFL 77 +E ++V + ++ + + L + + A T +P ++ Y + + Sbjct: 22 SIENEDDVRGALGRVSEGFGFRGFMVLAIPDSGSHSLTAQALMTTWPMDFLRRYDSARLI 81 Query: 78 AIDPVLNPENFSQGHLMWNDDLFSEAQ---------PLWEAARAHGLRRGVTQYLMLPNR 128 PV+ S ++ + + ++E A + RGV + Sbjct: 82 DGSPVIQRLRRSTIPFTYDAHQLARGRVDGKGEAAICVFEQA---NMPRGVYLPVHDAAG 138 Query: 129 ALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEIL 188 ++F + +S + ++ L L + P + S+RE E L Sbjct: 139 HRAAVAF----GGDRSAVSGDELQELNLWAGLLYSRLSEVRTRDRRGPG-SLSRREIECL 193 Query: 189 RWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 RW A GKT+ E+A I+++SE TVN + +K+++ N+ Q A GLI Sbjct: 194 RWAAAGKTTVEMARIMALSEYTVNHYLNRATRKLDSVNRVQTVAKAIRAGLI 245 >UniRef50_A5VEI3 Regulatory protein, LuxR n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VEI3_SPHWW Length = 301 Score = 160 bits (406), Expect = 3e-38, Method: Composition-based stats. Identities = 47/240 (19%), Positives = 84/240 (35%), Gaps = 14/240 (5%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLC----VRHPVPFTRPKVAFYTNYPEAW 67 ++++ + + +E + +L + P P +P+ W Sbjct: 62 SLVVGLEASRSMDEAMDVLHGAILELGFPRVVYGCVSIAHLPSGTWVPAPLQVRGFPDRW 121 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWN------DDLFSEAQPLWEAARAHGLRRGVTQ 121 + A DP + W D L GL G+T Sbjct: 122 DRDWPRHR--AHDPYAHTAFLKMESTNWTVVQNNADLLDPAQVDCISYINDLGLNPGLTV 179 Query: 122 YLMLPNRALGFLSFSRCSA-REIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 L +P GF++ +D + ++ +R + Sbjct: 180 PLFIPGHHYGFITAVGDGGLDGWDAAADRAGPTLAMIANYFDNFAIRRFGGP-PKESQSL 238 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 SKRE E L W+A GKT +IA+IL +S +TV + K + +K++A N++ A G+I Sbjct: 239 SKRELECLTWSARGKTVEDIAVILDLSADTVRVYLKRVNQKLDAVNRSHAVAKAMCLGMI 298 >UniRef50_Q2RSB6 Transcriptional regulator, LuxR family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RSB6_RHORT Length = 239 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 53/230 (23%), Positives = 85/230 (36%), Gaps = 18/230 (7%) Query: 27 YHEIELQAQQLEY-----DYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDP 81 QA L + DY + H P + N P + + + IDP Sbjct: 12 LDAACRQAMALGFAAVLYDYSPVPRAHDGTLITPTILETRNLPVDMAEIWCKQGYYQIDP 71 Query: 82 VLNPENFSQGHLMWNDD----------LFSEAQPLWEAARAHGLRRGVTQYLMLPNRALG 131 V + +W+ + L +E +P+ + R GL RGVT + AL Sbjct: 72 VQDAALLVSAPFVWSHEGDQSDVMARVLRAEHRPVLDYLRHRGLTRGVTVPIRCGEGALA 131 Query: 132 FLSFSRCSAREIPILSDELQLKMQLLVRESLMA-LMRLNDEIVMTPEMNFSKREKEILRW 190 + S P ++ + LL + + P ++ ++RE+E L Sbjct: 132 TFTAIAPSGAPFP--PEDRLSSLGLLGQSFHDRVYPGFPAASHLCPVVHLTRRERECLAL 189 Query: 191 TAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 EG T+ EIA + S TV FH +K+ A N+ Q AA L+ Sbjct: 190 CGEGLTAKEIAYRIDRSVPTVVFHLSAATRKLGARNRFQAIARAAYYRLL 239 >UniRef50_B3VN68 PanR n=1 Tax=Pantoea sp. CWB304 RepID=B3VN68_9ENTR Length = 246 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 45/227 (19%), Positives = 83/227 (36%), Gaps = 15/227 (6%) Query: 26 VYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNP 85 + + + + Y+ + + P WV Y N+ +DPV+ Sbjct: 15 INDHLAEKIEFYGDVKYAYAIIN---KENPIEMMVLTNHADWVELYLKNNYQLVDPVIIK 71 Query: 86 ENFSQGHLMWNDD-LFSEA---QPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAR 141 S +W++D +F ++ + + ++ G T L N + LS Sbjct: 72 CLSSVESFLWDEDIMFKAQYKLPMIFRMGKNYDIKSGCTFVLHDYNNNMALLSIMMGEHC 131 Query: 142 EIPILSDEL--QLKMQLLVRESLMALMRLNDEIVM------TPEMNFSKREKEILRWTAE 193 + L + ++Q L+ + ++ L E + RE ++L ++ Sbjct: 132 REETKTSILNDRDRLQSLLISAHTKILSLYQEESEIIQQEKKKPGLLTSRENDVLYLASQ 191 Query: 194 GKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 GKT +EIA L + E TV FH N+ KK+ N LI Sbjct: 192 GKTYSEIACSLKVKEVTVKFHMANVVKKLGVMNAKHAINLGIELKLI 238 >UniRef50_Q2T4M4 Autoinducer-binding transcriptional regulator, LuxR family, putative n=3 Tax=Burkholderia thailandensis RepID=Q2T4M4_BURTA Length = 238 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 65/242 (26%), Positives = 106/242 (43%), Gaps = 21/242 (8%) Query: 10 RRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVS 69 R + R + +A + + + + +L + + + + P+P TR + ++NYP A Sbjct: 5 REQFVRRMRASRSAGDAFDVVLQRGTELGFQFCAYRLTAPIPITRRRTFVWSNYPNA--- 61 Query: 70 YYQAKNFLAIDPVLNPENFSQGH----------LMWNDDLFSEAQPLWEAARAHGLRRGV 119 A PVL+ + +G S A LW G+R G Sbjct: 62 -------CAASPVLDADRSGRGADTDAQACGVTADATQVFESMADGLWAETSDQGVRYGW 114 Query: 120 TQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRL-NDEIVMTPEM 178 + A+G L F+R + + D+++ +M L + + L DE + Sbjct: 115 ALSVRDRWGAVGTLKFARGTREIVQEELDDIEPEMIWLAHLAHDTIGSLMRDETIPGEIA 174 Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 S E++IL WTAEGKT +EI+ IL +S +NFH +N+ K+ A NKT A A G Sbjct: 175 RVSLVERQILLWTAEGKTVSEISSILQMSVRNINFHIQNVVGKLGATNKTHAAVKATLVG 234 Query: 239 LI 240 LI Sbjct: 235 LI 236 >UniRef50_O54452 Transcriptional activator protein raiR n=9 Tax=Rhizobium RepID=RAIR_RHIET Length = 242 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 72/193 (37%), Gaps = 5/193 (2%) Query: 42 YSLCVRHPVPF-TRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLF 100 + + T YP WV Y+ +++ +IDPV+ + W+ + Sbjct: 41 IAYGSPCDLAGATDSNPLLMLTYPPEWVKQYRDRDYFSIDPVVRLGRRGFLPVEWSASGW 100 Query: 101 SEAQP--LWEAARAHGL-RRGVTQYLMLPNRALGFLSF-SRCSAREIPILSDELQLKMQL 156 + ++ A A G+ R+GVT + P + S + +Q Sbjct: 101 DSGRAYGFFKEAMAFGVGRQGVTLPVRGPQGERSLFTVTSNHPDAYWRQFRMDSMRDLQF 160 Query: 157 LVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQK 216 L M L+ + S+RE + L TA G + +I LSIS + V + Sbjct: 161 LAHHLHDRAMVLSGMRKVADLPRLSRRELQCLEMTANGLLAKQICARLSISVSAVQLYLA 220 Query: 217 NMQKKINAPNKTQ 229 + ++K+ ++ Sbjct: 221 SARRKLTVATTSE 233 >UniRef50_A8LML2 Putative transcriptional regulator n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LML2_DINSH Length = 265 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 89/258 (34%), Gaps = 30/258 (11%) Query: 10 RRTMLLRFQRMETAEEVYHEIELQA----------QQLEYD--YYSLCVRHP-------- 49 + +L E++ + A +D + + Sbjct: 3 KDELLAAATSATQVSELWTLMLDYAETQRIARVSYHHHGFDEKWGAAAANPTTLRRAMDD 62 Query: 50 --VPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSE 102 V T +P WV Y + IDP+ +W++ L E Sbjct: 63 VIVSATPRFHIIAHGFPREWVDIYVDDHLYEIDPIPALAQRRAVPFLWSEVAELTRLAEE 122 Query: 103 AQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESL 162 E + + GV + PN G++ ++ + QL+ + Sbjct: 123 QAAFLERSMPARVGDGVAIQVFGPNMRHGYVGMGFGDRP--RDVTAPQLAEYQLVSQLMH 180 Query: 163 MALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKI 222 + RL +E + E+ S RE E+L W A GK+ IA IL +S +TV+ + + +K+ Sbjct: 181 LRACRLIEERNRS-EIALSARETEVLGWMARGKSKTVIADILGLSPHTVDTLVRRIFRKL 239 Query: 223 NAPNKTQVACYAAATGLI 240 ++T A GL+ Sbjct: 240 EVFDRTAAILKAINLGLV 257 >UniRef50_A5P6U9 Transcriptional regulator, LuxR family protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P6U9_9SPHN Length = 211 Score = 157 bits (397), Expect = 3e-37, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 84/214 (39%), Gaps = 12/214 (5%) Query: 34 AQQLEYDYYSLCVRH--PVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQG 91 + D +S +R + W+ Y + +F DP+ + + Sbjct: 1 MDRFGADKFSYHFTPVFGSQVSRETQVVARGFSMDWLDLYDSADFRQCDPIPDEVMRAGH 60 Query: 92 HLMWNDDL-----FSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPIL 146 + W + L E + A R +G+ G L P+ + +F + Sbjct: 61 TISWEEALDRAEHTPEVERFIAALREYGIANGFGVPLYGPDNRDAYAAFGFPAEVTP--- 117 Query: 147 SDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSI 206 ++E + + ++ R + + +L + E++ S+RE E+LR A GK+ IA +L I Sbjct: 118 TEEQIVALTMVARTAHDRVCQLV--TIEEGEISLSQRELEVLRLIAHGKSKPVIAQLLEI 175 Query: 207 SENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 S +TV + K + K+ ++ A LI Sbjct: 176 SADTVGTYVKRLYAKLGVSDRVGATVKALKLKLI 209 >UniRef50_A3WCG7 Two-component transcriptional regulator, LuxR family protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WCG7_9SPHN Length = 236 Score = 156 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 90/245 (36%), Gaps = 18/245 (7%) Query: 3 DKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY-- 60 + F T++ +V + QA + S V + A Sbjct: 1 MQRHFDHVETLVE-------ISDVLTYVRDQAIKAGAARMSYHVTPAFDQQTSRTAAVYA 53 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLF-----SEAQPLWEAARAHGL 115 + + W++ Y + F DP+ + W D + + + + + + L Sbjct: 54 HGFSDEWMALYAKEEFRLTDPIPGRVMQFGSLMTWQDAMSWQHNTPDQEAYFAKMKEYDL 113 Query: 116 RRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT 175 G L N + SF + ++ E ++ L + + ++ L + + Sbjct: 114 IHGFGIPLYGRNARDAYASFDFLKH--VDDVAPESIGMIRSLSQVAHQRVVILVEHKLDA 171 Query: 176 PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 P S+RE E+L W A GK+ + IA IL IS +T + K + K++ ++ A Sbjct: 172 PA--LSEREVEVLTWAARGKSLSAIATILDISPDTAKTYSKRIYAKLDVSDRVGAVVKAL 229 Query: 236 ATGLI 240 GL+ Sbjct: 230 RMGLV 234 >UniRef50_C4K6Q5 Autoinducer response regulator n=2 Tax=Enterobacteriaceae RepID=C4K6Q5_HAMD5 Length = 235 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 54/205 (26%), Positives = 85/205 (41%), Gaps = 10/205 (4%) Query: 42 YSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFS 101 + V H F + +N P W Y N IDPV+ W++++ Sbjct: 28 FGYLVIHKKDFH--HICIISNCP-EWFDIYLEFNHQLIDPVVIKALSRVEDFEWDENILI 84 Query: 102 EAQ----PLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLL 157 ++ + + A+ + + RG T L + L LS + KM LL Sbjct: 85 SSKLALPKVLDQAKTYDISRGHTFVLHDYKQNLAILS-IFDDRPLKTNDFFIDREKMYLL 143 Query: 158 VRESLMALMRLND--EIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQ 215 + ++ L+ L + EI + SKRE EIL W + GKT EI+ I+ I E ++ FH Sbjct: 144 LVKTHQKLLSLYEKFEIPTKKNIGLSKRENEILHWASIGKTYQEISKIIGIKECSIKFHM 203 Query: 216 KNMQKKINAPNKTQVACYAAATGLI 240 KN+ K+ A N A L+ Sbjct: 204 KNITNKLGAINSRHAIKLAYELKLL 228 >UniRef50_B7UX52 Probable transcriptional regulator n=5 Tax=Pseudomonas aeruginosa RepID=B7UX52_PSEA8 Length = 243 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 95/246 (38%), Gaps = 13/246 (5%) Query: 3 DKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKV----A 58 D+ S + R ++ T E V E+ A +L +D +C P P + Sbjct: 1 MTDYASLLFDSVARLRKAATTEAVCREMVEFAARLGFDRVIVCSLFPRPGEDELIDELFF 60 Query: 59 FYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPL----WEAARAHG 114 + ++ E S Q +L PV W+ + + + R G Sbjct: 61 VHGDWAEG-RSAQQRDAYLLHCPVTRHILELDEPFFWSKSPSEDPERMTYRIVRGVRDLG 119 Query: 115 LRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVM 174 G+ + N G +SF+ E L+ +L Q AL RL + Sbjct: 120 QVNGMQVPVFGRNGLEGAVSFAG----ERLDLNAGCKLAAQAFCPILFFALKRLRGPVSA 175 Query: 175 TPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 S+RE+E+L+W A GK AE+A IL ISE TV H + ++++ A + Q A Sbjct: 176 GDAQALSEREREVLQWIALGKQQAEVAAILMISERTVENHLRAARRRLGAASTAQAVARA 235 Query: 235 AATGLI 240 G I Sbjct: 236 LRLGDI 241 >UniRef50_D1RJW3 LuxR family transcriptional regulator n=1 Tax=Legionella longbeachae D-4968 RepID=D1RJW3_LEGLO Length = 247 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 50/232 (21%), Positives = 88/232 (37%), Gaps = 11/232 (4%) Query: 10 RRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPK-VAFYTNYP-EAW 67 +++ R +++ E+ ++ + ++ + T K V + P +AW Sbjct: 1 MQSIKKRMAEVKSIHELNTLLKNYFWSISIKSFAFTYYNQHTKTGSKLVYEWATTPLDAW 60 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWND------DLFSEAQPLWEAARAHGLRRGVTQ 121 YY + + ID L S + W+ + + + GL +G+ Sbjct: 61 HKYYLQEGYADIDRTLEATEQSLLPIFWDVKEQLRLAKNKRMRRFKQESLIFGLDKGLCI 120 Query: 122 YLMLPNRALGFLSFS-RCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 L P L R + + + + + +L +RL + Sbjct: 121 PLHGPKGEFVILVLHQRINEHGLKNWENHVDTWLGILHTYFH--FLRLLLNEKKIGVVPL 178 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVAC 232 +KRE+E LR TAEG IA +L IS+ TVNFH +N KK+ NK Sbjct: 179 TKREQECLRLTAEGFRLELIAQLLKISKRTVNFHLQNANKKLGVTNKYLAIM 230 >UniRef50_Q2YJ50 HTH-type quorum sensing-dependent transcriptional regulator vjbR n=35 Tax=Brucellaceae RepID=VJBR_BRUA2 Length = 259 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 51/232 (21%), Positives = 82/232 (35%), Gaps = 16/232 (6%) Query: 23 AEEVYHEIELQAQQLEYDYYSLCVRHPVPF----TRPKVAFYTNYPEAWVSYYQAKNFLA 78 + + ++ Y + R V + P WV+ Y +KN+ A Sbjct: 21 QSDTLALLTRIRDEIGCRYVTHTYRGRVGDCTKVNSADLTVLMTLPATWVARYSSKNYFA 80 Query: 79 IDPVLN----PENFSQGHLMWN----DDLFSEAQPLWEAARAHGLRRG-VTQYLMLPNRA 129 IDPV + + D+ L A HGL + P Sbjct: 81 IDPVFQEDAPYYRNDTSAIARDLKEDADICPAVAELLHDAEKHGLGNLFIAVSARNPKGV 140 Query: 130 LGFLSFSRC-SAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEIL 188 G F+ + ++ ++ L + D + + RE + L Sbjct: 141 AGCTVFTFEVEDEDRTQFLARMRPRLLSLAGIIHGTVCGCKD--ANSVASLLTPREVDCL 198 Query: 189 RWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 RW A GKT EIA ILSI+ TV + +N + K+N N+T A + G+I Sbjct: 199 RWAANGKTDGEIAEILSIARWTVVTYLQNAKIKLNCSNRTSAVATALSLGII 250 >UniRef50_A4KVQ8 Probable transcription activator TraR n=2 Tax=Rhizobiaceae RepID=A4KVQ8_RHIME Length = 237 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 82/224 (36%), Gaps = 9/224 (4%) Query: 20 METAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAI 79 V +E A + E+ Y+ P + +N W+ + + Sbjct: 20 AHDDATVKAALEGLADRFEFSGYAYTKLLPG-----EFCVISNLHPDWLKRKRKFDLDRR 74 Query: 80 DPVLNPENFSQGHLMWN---DDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFS 136 +PVL S+ +W+ ++L E Q + A +R G+T + + N A+ LSF Sbjct: 75 NPVLRRAQQSRRAFVWSSQEENLSEEDQSFFGCAAKFEIRSGITIPIAISNGAISALSFV 134 Query: 137 RCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKT 196 + + V + + +L + + +E RW + GKT Sbjct: 135 SPKPVLTAQE-EIDPIAASSAVGQLHARIEQLKVAPSIQEPFYLTPKEGTYTRWLSLGKT 193 Query: 197 SAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + A I + NTV +++ + N TQ+ A GL+ Sbjct: 194 VEDTADIEHVKYNTVRIALAEARRRYDLCNNTQLVALAIRRGLV 237 >UniRef50_C4RAJ6 Transcriptional Regulator, LuxR family n=1 Tax=magnetite-containing magnetic vibrio RepID=C4RAJ6_9PROT Length = 261 Score = 153 bits (387), Expect = 4e-36, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 90/247 (36%), Gaps = 12/247 (4%) Query: 3 DKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRP-KVAFYT 61 + Q ++ + + + + +D+ + ++ +++ Sbjct: 16 GSNLLQEASAFFELLQAQSCIDDCWMALLEEVGRHGFDWAMYGFGRRRNDSEELEITYFS 75 Query: 62 NYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMW-----NDDLFSEAQPLWEAARAHGLR 116 NY + W Y+ D S ++ ++L E + + E A+ G++ Sbjct: 76 NYSKEWQDEYEKLGGSQNDIDTLHCISSTEDQIFFSPETRENLTPEQKAIDEFAQRSGIK 135 Query: 117 RGVTQYLML--PNRALGFLSFS-RCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIV 173 G++ L G L S R E + DE + ++L+ + + Sbjct: 136 NGISFPLRAGPDINDWGGLGLSTRMDDDEFSAVLDERRDYLRLIAQVFHAV---TQSRPL 192 Query: 174 MTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 + +++EK+ L TA+G + +IA L +S+ V+ H K+ + +TQ Sbjct: 193 AKNALLLTEKEKQALSLTAKGLKTKQIADKLGMSDKAVDQHIARATAKLASTTRTQAVAE 252 Query: 234 AAATGLI 240 A ++ Sbjct: 253 AIRLHIL 259 >UniRef50_Q28MF2 Transcriptional regulator, LuxR family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28MF2_JANSC Length = 243 Score = 153 bits (387), Expect = 5e-36, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 89/242 (36%), Gaps = 10/242 (4%) Query: 7 FSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEA 66 + M V+ + A L + +L + P R TN P Sbjct: 2 IQRLQDFSEDIIGMTGPRAVWAGMAHLADDLGMPFCTLTMARRAPDLRSSQF-ITNLPAP 60 Query: 67 WVSYYQAKNFLAIDPVLNPENFSQGH--LMWNDDLFSEAQP----LWEAARAHGLRRGVT 120 + Y F+ DP L+ M + D EA + R+ G+ + Sbjct: 61 FQDTYCEGGFINDDPFLSLICRDMTAAGFMTDPDDLPEADQRQGAFLDLTRSFGVGTALC 120 Query: 121 QYLMLPNRAL--GFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEM 178 + ++ G++ AR++ + +++QL + L L + Sbjct: 121 IPVRTTRQSEFGGWVIGGDLRARDVADGREIAAMQLQLAGLIAFERLSVLTRQANHAHR- 179 Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 S RE+E L+W + G +IA L ISE+ V+ + KN ++K A + Q +A +G Sbjct: 180 RLSPRERECLQWLSAGLRVTQIAHRLDISESAVHLYIKNARRKFGARTREQAVAHAIVSG 239 Query: 239 LI 240 I Sbjct: 240 EI 241 >UniRef50_A5PE73 Transcriptional regulator, LuxR family protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PE73_9SPHN Length = 226 Score = 152 bits (385), Expect = 8e-36, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 85/227 (37%), Gaps = 9/227 (3%) Query: 19 RMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLA 78 + ET ++ + L + ++ V V YPE ++ YQ + Sbjct: 2 QCETETDLVDLLWKHFGGLGFQGFAYMV-PSRDSPLTMVYKSRGYPEKFIETYQREKLYL 60 Query: 79 IDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFL 133 IDP + L ++ L + + G+ G+ + + Sbjct: 61 IDPFPAHVTRHKSTLRISEIAQQAKLSRAETDYIDRMKKMGITDGLIIPTFGMDLR--IV 118 Query: 134 SFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAE 193 F + ++ ++ + ++ + L L + +RE EIL W A+ Sbjct: 119 KFVLGQVTDFSVIENDNLFEFTATLQMAHRRLDELARQDEPIRR-RLPRREVEILHWIAK 177 Query: 194 GKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 GKT+AEIA IL ++ TV H M +K++ ++ +A G+I Sbjct: 178 GKTNAEIAAILGVAAPTVATHIARMFQKLDVNDRAALAVKGFRYGII 224 >UniRef50_B9JZN6 Transcriptional regulator LuxR family n=1 Tax=Agrobacterium vitis S4 RepID=B9JZN6_AGRVS Length = 241 Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 58/240 (24%), Positives = 92/240 (38%), Gaps = 14/240 (5%) Query: 10 RRTMLL-RFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY-TNYPEAW 67 R+T+L ME+ E + AQ + S+ + T P + Sbjct: 6 RQTLLSTEITAMESREHCAEILRTVAQAFGLSHGSILLAPCATDVHLLPLVMETTLPMEF 65 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWN-------DDLFSEAQPLWEAARAHGLRRGVT 120 + F+ PV+ S W+ D + + L GV Sbjct: 66 GHEFDRHQFVKFCPVVKKFAGSILPRTWDMKFREPNDMAEEWPPAMRDLMMRFKLIVGVV 125 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 + L F+ F + LS ++ +L RL +M ++ Sbjct: 126 FIFPSLDSRLYFMRF----DGDRSPLSQCEVNELGMLAMAVFDTYDRLRRTELMNVDV-L 180 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 S RE E+LRWTA+GKTS EI ILS+S++T+N + KK++ N+TQ+ A LI Sbjct: 181 SVRELEVLRWTAQGKTSVEIGQILSLSDHTINAYMTTAMKKLDCVNRTQLVAKAIRLKLI 240 >UniRef50_B3DZX3 Transcriptional regulator LuxR family n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DZX3_METI4 Length = 251 Score = 150 bits (378), Expect = 5e-35, Method: Composition-based stats. Identities = 44/190 (23%), Positives = 79/190 (41%), Gaps = 7/190 (3%) Query: 58 AFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSE-----AQPLWEAARA 112 ++P +++Y + + DPV+ +G+++ ++F + A Sbjct: 60 IINHSFPSDLIAFYLQQKYQKADPVVKTALRLRGNIVRRTEIFRYFQDNFRSQYLKDASD 119 Query: 113 HGLRRGVTQYLMLPNRALG-FLSFSRCSAREIPILSDEL-QLKMQLLVRESLMALMRLND 170 L G++ ++ SF + P L LK L + + + + Sbjct: 120 ISLHTGLSFGIVEEKTYRASLFSFCDKEIEKSPRHETILNGLKYPLHLALLNCSHPQEVE 179 Query: 171 EIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQV 230 + + RE EIL+W +GKT+ EI+ IL ISE TV FH KN+ K++ N+ Q Sbjct: 180 KPAKESPQALTARELEILKWIMDGKTNWEISCILKISEATVKFHLKNIFLKLDVQNRCQA 239 Query: 231 ACYAAATGLI 240 A L+ Sbjct: 240 VATAFHRRLL 249 >UniRef50_D0X6W6 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0X6W6_VIBHA Length = 225 Score = 149 bits (377), Expect = 8e-35, Method: Composition-based stats. Identities = 45/231 (19%), Positives = 93/231 (40%), Gaps = 13/231 (5%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWV 68 + + + E+++ ++ ++++++ L + P ++ P+ + Sbjct: 5 RLFELSNQLRCAESSDAIHAWFGELQNEIDFEFSILGLFGDDYAPDPVCYGFS--PDQFA 62 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNR 128 + +K DP++ S +M + S P +G R + Y + Sbjct: 63 N-CFSKKTAESDPLIAALQQSNHGIM--ALMDSHTHP------DYGKRLLLAGY-HGDKK 112 Query: 129 ALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEIL 188 A+ SF + L L + S + + E + PE + RE E+L Sbjct: 113 AIYLTSF-GDRQPSSEEIDALYLLTPHLYMASSYVCDRNIRVETLPAPESQLTTRECELL 171 Query: 189 RWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 W GK++ EI+ +L+ISE TV +H +N+ +K++ N+T A G Sbjct: 172 PWLKLGKSNWEISRLLNISERTVKYHLQNIYRKLDVHNRTHAVSKAIELGW 222 >UniRef50_A3JSN6 Autoinducer-binding transcriptional regulator, LuxR family protein n=13 Tax=Rhodobacterales RepID=A3JSN6_9RHOB Length = 273 Score = 149 bits (376), Expect = 9e-35, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 85/251 (33%), Gaps = 13/251 (5%) Query: 3 DKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVP----FTRPKVA 58 + L R + EEV+ + +D + Sbjct: 14 NGRSLRMINDKLERILEATSIEEVWGAHTATMESYGFDRLLYGFTRYRTARSFGDLQDIL 73 Query: 59 FYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWN--------DDLFSEAQPLWEAA 110 +N+P+ ++ Y P++ + + G W L + E Sbjct: 74 TLSNHPKEYLERYLGGTLYLHGPMVRWLSQNVGACSWRWIDEQRAAGKLSEREIEVHEFN 133 Query: 111 RAHGLRRGVTQYLML-PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLN 169 ++ GL G + +RA G ++ + + + + +V + + +++ Sbjct: 134 KSMGLVGGYSISFKDVSDRAKGAIALTARPGLSQDDVEEIWKRDGSDIVTINKVMHLKVT 193 Query: 170 DEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQ 229 +KR+ E+L W A+GKT+A+ A I+ ++ T+ H + + ++ Q Sbjct: 194 QLPYAGLRRPLTKRQIEVLEWVADGKTTADAATIMGLTNATIEKHLRLARDVLDVDTTAQ 253 Query: 230 VACYAAATGLI 240 AA I Sbjct: 254 AVMKAAVLNQI 264 >UniRef50_A8LK93 Putative regulatory protein n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LK93_DINSH Length = 260 Score = 148 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 37/237 (15%), Positives = 79/237 (33%), Gaps = 20/237 (8%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVR----HPVPFTRPKVAFYTNYPEAWVS 69 L ++ EE + + + +D R ++ P+ +V Sbjct: 14 LSEITATQSIEEAWALHCTRMAEYGFDRLFYGHTRFSTPSTYADRHDALILSSLPQGYVE 73 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWN--------DDLFSEAQPLWEAARAHGLRRGVTQ 121 Y + P++ + G W+ D++ + +A G+ G + Sbjct: 74 RYLREGHYRNIPMIRWAEKNDGACSWSEVYARLHPDEMTPGTRKALGTRQAFGIENGYSI 133 Query: 122 YLM-LPNRALGFLSFSRCSA---REIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPE 177 L +S ++ + +++L R + + L Sbjct: 134 SFRNLCQGGFAAISLVGREGLSQADLDKIWASRGAEIELANRVFHLVVSSL----PSRRP 189 Query: 178 MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 + R++E+L W A GKT EI +++ + TV H + ++ +NA Q A Sbjct: 190 NRLTPRQREVLEWVAHGKTVPEICLLIGRKQATVEKHLRLAREAMNAQTTAQAVLRA 246 >UniRef50_Q2RT10 Transcriptional regulator, LuxR family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RT10_RHORT Length = 254 Score = 147 bits (371), Expect = 3e-34, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 81/226 (35%), Gaps = 15/226 (6%) Query: 30 IELQAQQLEYDYYSLCVR---HPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPE 86 + + + + S H + + +++ +A++ Y L+ D + Sbjct: 1 MRREFEAAGVPHVSYGALFSPHYRSDPGRETVYMSHFDQAFLDRYSQAGHLSHDTAVQWV 60 Query: 87 NFSQGHLMW-----NDDLFSEAQPLWEAARAHGLRRGVTQYLM-LPNRALG--FLSFSRC 138 + W +L +WE A G+R G++ + + + G F S + Sbjct: 61 FRFSQPVPWVTPRRLAELSERQIRVWEEGEAFGVRNGLSVPVRFGRDGSAGGLFFSATGL 120 Query: 139 SAREIPILSDELQLKMQLLVRESLMALMRLN----DEIVMTPEMNFSKREKEILRWTAEG 194 + + + + L A+ R ++ + RE+E L W+A G Sbjct: 121 GDDDWRGILTDKGATLVALAYTFHEAMERFPLFSTRVNPQDHVIHLTNRERESLIWSARG 180 Query: 195 KTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E+A L +++ T H ++K+ A Q A A GL+ Sbjct: 181 CQVGEVADRLGVADRTAEHHLGAARRKLMARTTAQAVARALAMGLL 226 >UniRef50_Q1GHC1 Transcriptional regulator, LuxR family n=15 Tax=Rhodobacteraceae RepID=Q1GHC1_SILST Length = 251 Score = 147 bits (371), Expect = 4e-34, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 92/240 (38%), Gaps = 13/240 (5%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVR----HPVPFTRPKVAFYTNYPEAW 67 L + + +T EE++ Q + +D TN+ + Sbjct: 5 EYLQQLTQFKTIEELWRAHVQQMSRYGFDRLLYGYTLFKTRTSLGDPDDFVILTNHCPEY 64 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWN--------DDLFSEAQPLWEAARAHGLRRGV 119 + + A A P+L ++GH W L +A+ + + ++ G+ G Sbjct: 65 LQGFLADGLYAHAPMLTWALENEGHASWRVSQEMAAQGLLDKQARKVQDFNQSMGVHAGY 124 Query: 120 TQYLMLPNRAL-GFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEM 178 T + G +S + + + + +V + +A +++ P+ Sbjct: 125 TISFNSASERFKGAISLAARADLDQDGIDQIWAEHGADIVLMNNVAHLKILTLPYHAPKR 184 Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 +KR++E+L+W +GKT+ +IA+++ ++ T+ H + + ++ Q AA Sbjct: 185 GLTKRQREVLQWVGDGKTTQDIALLMGLTPATIEKHLRLARATLSVETTAQAVLKAALHN 244 >UniRef50_C6XN41 Transcriptional regulator, LuxR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XN41_HIRBI Length = 249 Score = 146 bits (370), Expect = 5e-34, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 85/246 (34%), Gaps = 16/246 (6%) Query: 11 RTMLL---RFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPK--VAFYTNYPE 65 +T + R Q ++ EE+ I+ + + ++ + F+R + F + + Sbjct: 4 QTFMDGCDRLQSAKSQEEITKAIQGFVENKGFWSFNFGYLDTLNFSRADAPLKFISTMSD 63 Query: 66 AWVSYYQAKNFLAIDPVLNPENF-SQGHLMWNDDL-------FSEAQPLWEAARAHGLRR 117 W +Y + + +D + ++ +L S+ + A + Sbjct: 64 DWAEHYMNEKYEEVDFAVRELRKERPTPILVGYELQKKMQVLTSDEEKYLRDAAEANWQN 123 Query: 118 GVTQYL---MLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVM 174 G L + N+ + + + + E L+ + ++ + ++ Sbjct: 124 GCVIPLGSLPMDNKPPAGIGVASELREKEFLKVWEAGASEILVFMNFMNQVLSQSIADLL 183 Query: 175 TPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 + RE++ L + A G I LSI+ TVN H +N + K+ A A Sbjct: 184 YSIEPLTDRERDCLAFLARGLRPDRIGDELSIATVTVNMHIRNARYKLKATTNAHAVAKA 243 Query: 235 AATGLI 240 I Sbjct: 244 IRLNFI 249 >UniRef50_B9J7F2 Transcriptional regulator protein n=10 Tax=Rhizobium/Agrobacterium group RepID=B9J7F2_AGRRK Length = 243 Score = 146 bits (369), Expect = 6e-34, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 85/235 (36%), Gaps = 12/235 (5%) Query: 13 MLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY-TNYPEAWVSYY 71 + T +E + + + + + ++ + Sbjct: 13 LSAELATARTQTAFAQALERTSSAFGFSQVAFLNAPVSEDSMLTPLVIEGSVQPQFLRDF 72 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGLRR----GVTQYLML 125 + L P+L S W+ + S+ L A L G+ + Sbjct: 73 DRQQLLRRCPMLQRVRDSVMPRAWHLLEKNISQDMELPRELHALLLSHNCPMGIVIPINS 132 Query: 126 PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREK 185 + F + +EL + M L + + R + ++ S RE Sbjct: 133 SDGQRLVFWFMGNRSSLGQSELNELNMIM-LQAHDIYNCIKRNDGSVL----HMLSAREL 187 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E++RWTA+GKTS EI ILS+S++TVN + N KK++ N+TQ+ A LI Sbjct: 188 EVVRWTAQGKTSVEIGQILSLSDHTVNAYMMNAIKKLDCVNRTQLVAKAIRLKLI 242 >UniRef50_A4ELE0 Transcriptional regulator, LuxR family protein n=5 Tax=Rhodobacteraceae RepID=A4ELE0_9RHOB Length = 202 Score = 145 bits (367), Expect = 9e-34, Method: Composition-based stats. Identities = 52/200 (26%), Positives = 82/200 (41%), Gaps = 16/200 (8%) Query: 41 YYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLF 100 Y +L + P +P+ W+++Y + F+ DPV+ + G + W Sbjct: 19 YIALRIGFAFPMEE-----VNAFPQGWIAHYTKQRFMLFDPVVKWAYGNVGTIRWFKLAE 73 Query: 101 SEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRE 160 + + + A+ G+R GVT + + A SF+ + + E++L + L R Sbjct: 74 DDPKRIIAQAQTFGMRFGVTVSVFDSS-ADAQRSFASFTRSDRDYTDLEVKLLLAYLTRR 132 Query: 161 SLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQK 220 P N +K E E L +GK EIA LS+SE V KN + Sbjct: 133 HNE----------TAPPTNLTKAELEALGMVKDGKRLKEIAFELSVSEGAVKQRLKNAKL 182 Query: 221 KINAPNKTQVACYAAATGLI 240 K+ A TQ A A GLI Sbjct: 183 KLGAKTGTQAAALANQYGLI 202 >UniRef50_B4SS41 Transcriptional regulator, LuxR family n=3 Tax=Stenotrophomonas RepID=B4SS41_STRM5 Length = 234 Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 51/235 (21%), Positives = 86/235 (36%), Gaps = 14/235 (5%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYY-SLCVRHPVPFTRPKVAFYTNYPEAWV-- 68 LL +R ++ EV + A L YD + +V + W+ Sbjct: 6 QALLGLERADSLTEVGAILRSVAAPLGYDRVLVFATGTGLERDAQRVYWIEG---DWLGD 62 Query: 69 -SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQP--LWEAARAHGLRRGVTQYLML 125 S +L PV S W+ + + + + R GL G+ + Sbjct: 63 GSDTDLARYLHACPVNRHVLDSDAPFFWSKRQGARGERYQVVKQPRGDGL-HGLQVPVFG 121 Query: 126 PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREK 185 G +SF+ + S +L ++ + + RL + P S RE+ Sbjct: 122 TTGLEGAISFAGAAV----DASARARLLLEAVATAAFRTARRLAEAPAELPVGALSARER 177 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E+LRW A G+ AEIA L +S TV H + ++++ Q A+ G I Sbjct: 178 EVLRWVAAGRRQAEIAATLGLSARTVENHLRRARQRLGVATTAQAVRAASRRGEI 232 >UniRef50_A5F0P9 Transcriptional regulator, LuxR family n=25 Tax=Proteobacteria RepID=A5F0P9_VIBC3 Length = 253 Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 44/235 (18%), Positives = 82/235 (34%), Gaps = 14/235 (5%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRH-PVPFTRPKVAFYTNYPEAWVSY 70 T++ + + + V + +A YD H + ++ + W Sbjct: 22 TLISQLEESHSFSTVQDIVRQRAHFYGYDKIVFFSAHSTLDGIIERIYWIEG---DWFDD 78 Query: 71 ---YQAKNFLAIDPVLNPENFSQGHLMWND--DLFSEAQPLWEAARAHGLRRGVTQYLML 125 A ++ P+ + W D+ E + + G+ G+ + Sbjct: 79 GENIDAATYIKYCPITRHIIETDRPFFWTKKPDVNREQYRVVAKPKGSGI-HGLQIPIFG 137 Query: 126 PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREK 185 G +S + S + ++ LL + A RL + SKREK Sbjct: 138 HLGLEGAVSL----GGKAIDSSPRARCELSLLSTYAFFAARRLLESSDPNRSALLSKREK 193 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E+L TA G+ A+IA+ L +S T+ H +N + K+ + A G I Sbjct: 194 EVLSLTALGRRQADIAIALGVSPRTIENHLRNARLKLGGATTAETIRIAIQRGDI 248 >UniRef50_Q1YE62 Possible transcriptional regulator, lysR family n=2 Tax=Aurantimonadaceae RepID=Q1YE62_MOBAS Length = 294 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 50/240 (20%), Positives = 86/240 (35%), Gaps = 22/240 (9%) Query: 14 LLRFQRME---TAEEVYHEIELQAQQLEYDYYS-LCVRHPVPFTRPKVAFYTNYPEAWVS 69 L R R+ + + A + + + L V +N+ E++ Sbjct: 63 LDRLNRLAPPWDEIALTQLLGDVATDFGFSHAAVLSVPSTDDGGTATRLLLSNWSESFGQ 122 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWN---------DDLFSEAQPLWEAARAHGLRRGVT 120 Y+ V+ +W+ D A+ L E + G Sbjct: 123 AYEQLGLHRSKLVVGALKTDPMPFVWDIDTLYGADEPDPSPAARMLME--AEY--LAGAF 178 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 + G LSF+ S E L + ++A R + P Sbjct: 179 FPVHGLTAFNGALSFAGRSCALPAEAIRE--LHLFAFALFGMLAAARFEENRRNNP---L 233 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 S RE++ L+ GKTS+EI +ILS+SE T++ + Q+K++A N+T AA G + Sbjct: 234 SVRERDCLKLAMLGKTSSEIGIILSLSEYTISQYLTAAQRKLDASNRTHAVALAAQLGYL 293 >UniRef50_D1SY03 Transcriptional regulator, LuxR family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SY03_9BURK Length = 264 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 89/231 (38%), Gaps = 18/231 (7%) Query: 28 HEIELQAQQLEYDYYSL-----CVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPV 82 + A+++ +D + P V Y N P + + +DPV Sbjct: 24 DQTFSAAREIGFDAAIYDFSPVSMTPEGVLMTPSVLEYRNMPGPMRKLWVEQGMYQVDPV 83 Query: 83 LNPENFSQGHLMWNDDLFSE----------AQPLWEAARAHGLRRGVTQYLMLPNRALGF 132 G W+ E A+ + + RGVT L +P Sbjct: 84 QALALRGSGAFFWSYHQDEESVLQPMLDGGARSVSSVLTEWRMTRGVTVPLHMPGNRFAT 143 Query: 133 LSFS--RCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTP-EMNFSKREKEILR 189 L+ + + + + +++ + L+++ +I +TP ++ S RE E + Sbjct: 144 LTAMWQDDNFAQKKMSLVDSVMRLAYMAHILNDHLLKVFTKIQLTPRDVALSDREHECVL 203 Query: 190 WTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 AEG S +IA L+ +E+T+ FH ++ +K+ N+ Q+ AA G + Sbjct: 204 LAAEGMPSKQIAARLNRAESTIVFHLQSAARKLGGRNRAQMIARAAHFGYL 254 >UniRef50_A3PQ79 Response regulator receiver protein n=3 Tax=Rhodobacter sphaeroides RepID=A3PQ79_RHOS1 Length = 238 Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 83/222 (37%), Gaps = 4/222 (1%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQA 73 + R E+ E+ ++ L + YSL + P T +P Sbjct: 11 VGSISRAESRNELSQALKDAVVGLGFQTYSLAYQRPHALEAVTAPHLTTWPCEQDGASDP 70 Query: 74 KNFLAIDPVLNPENFSQGHLMWNDDLFSEAQ--PLWEAARAHGLRRGVTQYLMLPNRALG 131 + DP+L+ L+W + + + + R G+ L +G Sbjct: 71 ASARIRDPLLDYAVTGIKPLIWRSGSWKSLRKYRYFPCLHSFEARAGLIVPLPDRRGRVG 130 Query: 132 FLSFSRCSAREIPILSDEL--QLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILR 189 ++ + P E + + +LVR + + S R+ EIL Sbjct: 131 AITMLSAQREDYPEEIAEAGRIVALAVLVRAGSLLPAAAAVSPALAGLAKLSPRQIEILD 190 Query: 190 WTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVA 231 W A GK+++EIA+IL +S V +H + KK++ ++TQ Sbjct: 191 WIAHGKSNSEIALILGLSRRNVTYHVSEILKKLDVTSRTQAV 232 >UniRef50_A6UCQ1 Regulatory protein LuxR n=2 Tax=Sinorhizobium RepID=A6UCQ1_SINMW Length = 247 Score = 143 bits (361), Expect = 4e-33, Method: Composition-based stats. Identities = 51/240 (21%), Positives = 85/240 (35%), Gaps = 19/240 (7%) Query: 12 TMLLRFQ--RMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTR-PKVAFYTNYPEAWV 68 ML + T E+ H + + + ++ + R + +N+P V Sbjct: 16 DMLFEIDPASVRTEYELLHLMRRLISRYGFAHFMIARLPMADEQRFSERLMLSNWPAELV 75 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARA-HGLRRGVTQYLMLPN 127 Y A ++ ++ + + L E AR G + Sbjct: 76 QQYDASETFQASLLIERLRQTKLPI-------AGGPELMEPARKGAGKAPAILLPPHADM 128 Query: 128 RALGFLS-------FSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 L F + + + + + L + + L R D E Sbjct: 129 AHFAVLLHTTYGEPFVVVLSGKRDEPAGGERATLYLALVQLFECLERTFDAGSGARE-KL 187 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 S RE E LRW A GK+S EIA+IL IS TV+ + K+ +K++A N+ Q A LI Sbjct: 188 SSREIECLRWAAAGKSSDEIAIILGISAYTVSSYFKSATRKLDAVNRMQAIARAMRMKLI 247 >UniRef50_C6XPJ3 Transcriptional regulator, LuxR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XPJ3_HIRBI Length = 248 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 82/245 (33%), Gaps = 9/245 (3%) Query: 1 MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY 60 M + + + + + S + Sbjct: 1 MVSDNIANSLFVFAREAKECTDVPALGRLFQDLVAPYGVTASSAWAVIGGDVKLSRGF-- 58 Query: 61 TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLF-----SEAQPLWEAARAHGL 115 +P+ W +Y + + +DPV W++ + + E A AHG Sbjct: 59 GEWPKVWARHYADQRYFEVDPVFESLLKGFDAGYWDELVSNLPVSQAGLKVMEDAAAHGY 118 Query: 116 RRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT 175 G ++ + N + +S + P + L V E +M L R + Sbjct: 119 ADGYSRLIPTLNGSYYLVSLYGKTLVRDPNVRILFDLASIKFVHEGVMLLNRRVGTPLKD 178 Query: 176 PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 + +KR+ E+L+ A G+T + A L +S V H ++K++NA +Q A Sbjct: 179 HD--LTKRQIEVLQAKANGQTDKQTADRLGVSVKAVEGHLTKIRKQMNARTTSQAIGLAR 236 Query: 236 ATGLI 240 GLI Sbjct: 237 GKGLI 241 >UniRef50_C8Q1R2 Transcriptional regulator, LuxR family n=4 Tax=Enterobacteriaceae RepID=C8Q1R2_9ENTR Length = 243 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 43/203 (21%), Positives = 87/203 (42%), Gaps = 6/203 (2%) Query: 44 LCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEA 103 + F +++P+ Y + +DPV+ H W+++L + Sbjct: 31 YIYLVMNKNNMDDMIFISDFPDEISDNYLNNKYQYVDPVIINALSRFTHFSWDENLKINS 90 Query: 104 ----QPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCS--AREIPILSDELQLKMQLL 157 + ++E ++H + RG L N L L F +I + ++ + ++Q + Sbjct: 91 MWTVKRIFEKIKSHNIIRGHAFVLHENNNNLAMLLFYIDKFLTSDIDDVFNKNRDELQGV 150 Query: 158 VRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKN 217 + ++ L+ + E E FS RE EIL W ++G T +++A +L+I+ +T+ FH Sbjct: 151 LIDTHEMLLSVYSEGEEVKEDVFSARESEILYWCSKGYTYSQVAEMLNITVSTIKFHMGK 210 Query: 218 MQKKINAPNKTQVACYAAATGLI 240 + KK+ N +I Sbjct: 211 VVKKMGVKNAKHAISLGIELKMI 233 >UniRef50_B6B644 Response regulator receiver protein, putative n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B644_9RHOB Length = 211 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 48/219 (21%), Positives = 86/219 (39%), Gaps = 18/219 (8%) Query: 24 EEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVL 83 ++ + ++ YS+ V V ++ Y + WV Y + +L +DP + Sbjct: 9 SDIRGILLRSLDKISESGYSIGVGFDGV---EPVFVHSTYAQRWVDRYVDQAYLLVDPTI 65 Query: 84 NPENFSQGHLMWND--DLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAR 141 S G + W + LF ++ +E A +GL G T + A G +S CS Sbjct: 66 QFGLSSTGWVTWKELERLFPSSKHFFEDAVKYGLVHGNTLAI----SADGRVSVLSCSGP 121 Query: 142 EIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIA 201 E + +L++ +L AL E + + + K++LR G EIA Sbjct: 122 EWS----DEELRIARAALYALHAL-----EYEPSHSITLTTPVKDVLRMMCNGCKDQEIA 172 Query: 202 MILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 L + TV ++ + ++A Q+ GLI Sbjct: 173 ENLGVKLETVRARRRTAMQALDAKTSAQLISQVIKFGLI 211 >UniRef50_A9E0R1 Transcription regulator, LuxR family, putative n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E0R1_9RHOB Length = 253 Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 74/236 (31%), Gaps = 9/236 (3%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNY-PEAWVS 69 ++ Q TA + Q D S T W S Sbjct: 13 DELVQCCQDAMTAASLLACGLAYYQPHGIDLVSYHGDSTGAPAILYRYEATGAETPRWHS 72 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWND-----DLFSEAQPLWEAARAHGLRRGVTQYLM 124 + L PV + W+ L + + G++ + Sbjct: 73 RFLDVETLRESPVEAIARQQVLPVYWSAVSKEARLTRAERAYMDRLLGRYPNDGISLKVH 132 Query: 125 LPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKRE 184 P + A + LS K+ + + + L + + S RE Sbjct: 133 GPGGDSAVVGLGF--AAKQARLSSIALYKLLCAAQIAHLRYCALAESQSPR-DFGLSPRE 189 Query: 185 KEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E+L W A GK++ IA IL IS +TV+ + + K++ ++T A GL+ Sbjct: 190 VEVLEWIATGKSNGVIAEILGISPHTVDTIVRRIFAKLDVNDRTTAAIRGLGAGLL 245 >UniRef50_B3RAC5 Putative transcriptional regulator, LuxR family n=1 Tax=Cupriavidus taiwanensis RepID=B3RAC5_CUPTR Length = 333 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 86/242 (35%), Gaps = 15/242 (6%) Query: 10 RRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNY-PEAWV 68 ++ Q T E ++ + + +D+ V F+ +Y P W Sbjct: 72 TPGLVTALQAEPTHEGRSAVMQSAIRAIGFDWLGYATAAHVGGQLQPRTFFESYSPPGWR 131 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEA----------QPLWEAARAHGLRRG 118 Y + + IDP +W+ D ++ + E R G+R G Sbjct: 132 ERYFRERYYEIDPRTPQPGTFCLPTVWDADDLAQTPLGNVPPLRRRRFLEDLRDAGVRSG 191 Query: 119 VTQYLMLP-NRALGFLSFSRC--SAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMT 175 + L +P N +SF S R I L M L + E L + + Sbjct: 192 IFLNLPMPGNNEFVLISFMSGIESRRWIGDSVVGQALAMGLALHEFLTCHVEIPA-FAGR 250 Query: 176 PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 S +++IL A+G + EIA + +S V++H + ++ N+ Q+A A Sbjct: 251 HREGLSDVQRDILACLAQGLSDKEIARRMDMSIFNVDYHMRRLRSHFGVRNRVQLASAAT 310 Query: 236 AT 237 Sbjct: 311 LL 312 >UniRef50_C8QBU4 Transcriptional regulator, LuxR family n=2 Tax=Enterobacteriaceae RepID=C8QBU4_9ENTR Length = 262 Score = 141 bits (355), Expect = 2e-32, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 86/222 (38%), Gaps = 9/222 (4%) Query: 26 VYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNP 85 + +E + ++ ++ V + N + + + Y + IDPV+ Sbjct: 28 IKENLERRIEKFGKISHAYAVMDK--KNTDNILVINNISDEFANEYLENKYQNIDPVVIT 85 Query: 86 ENFSQGHLMWNDDLFSEAQPLWEAA---RAHGLRRGVTQYLMLPNRALGFLSFSRCS--A 140 +W+ +L + + +++ G T L + + LS Sbjct: 86 ALNRVTSFIWDANLKINSHWPMDKVFIWKSYSFLCGHTFVLHDYHNNMATLSLYYDKYLM 145 Query: 141 REIPILSDELQLKMQLLVRESLMALMRL--NDEIVMTPEMNFSKREKEILRWTAEGKTSA 198 ++ + + + Q ++ + L+++ E V S RE EIL W++ GKT A Sbjct: 146 ADVGDMIETHKNDFQGILLDIHEMLLQVYRKSEEVAAANTLLSTREAEILYWSSTGKTYA 205 Query: 199 EIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E+A +L ++ +T+ FH KK+ N A+ LI Sbjct: 206 EVAEMLQLTVSTIKFHMGKTVKKLGVKNAKHAISLASELNLI 247 >UniRef50_A0P1W5 Transcriptional regulator, LuxR family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P1W5_9RHOB Length = 233 Score = 141 bits (355), Expect = 3e-32, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 75/232 (32%), Gaps = 15/232 (6%) Query: 11 RTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSY 70 + R + ++ +D V V T + + ++ Sbjct: 7 EDFVETISREVAPDALWQSTLAFLADAGFDKVL-----RVRAGVSGVTVRTTLSDGFQTF 61 Query: 71 YQAKNFLAIDPVLNPENFSQGHLMWNDD-------LFSEAQPLWEAARAHGLRRGVTQYL 123 Y + DP L S + D L ++ L +A G R G + Sbjct: 62 YWENGYQKDDPFLRHCMTSPVAVATGADYLDRYDYLNERSRRLILSAAEDGFRAGFSVVA 121 Query: 124 MLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKR 183 +P + S R + + ++ + + L+R +L+A+ D + + R Sbjct: 122 PVPEQRRALGWNIGSSLRRAEV--ERIRQEREPLIRLALVAVQNRLDGP-EAVRASLTPR 178 Query: 184 EKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAA 235 E E L A G IA L I TV H N +KK+ A + A Sbjct: 179 ELECLSLIASGLRVKAIAAELGIQPVTVELHLGNARKKLGAATREHAVALAF 230 >UniRef50_Q48KM4 Transcriptional regulator, LuxR family n=6 Tax=Pseudomonas syringae group RepID=Q48KM4_PSE14 Length = 240 Score = 140 bits (352), Expect = 5e-32, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 81/240 (33%), Gaps = 22/240 (9%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWV 68 + M+ ++ + + +E ++ + N +AW Sbjct: 14 LIQQMVSTISELDGQTAIENALEWLRRECNSERAMFYQFKGPVL---LTFITCNVDDAWG 70 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAH--------GLRRGVT 120 Y+ + F+ DPV+ G + W D P+ + G Sbjct: 71 KAYRQREFITQDPVIRCYRNQLGFVNWQDAF--RQYPVSACYEEIVVTCELLPAISYGYM 128 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 + + + +S E + M L+ L Sbjct: 129 NHCRGADSVTSVCTL----GEVGRAISAEQKYLMSSLMPVLHSVARGLKFCSR-----GL 179 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + RE E+L+W +GKT+ EI+MI +SE+TV +H K + K+ N+ Q A GLI Sbjct: 180 THRELEVLQWARDGKTAWEISMIRDVSESTVKYHLKTIYSKLGVANRAQAVGEALCRGLI 239 >UniRef50_Q7MYV6 Similar to transcription regulator n=2 Tax=Photorhabdus RepID=Q7MYV6_PHOLL Length = 238 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 54/219 (24%), Positives = 89/219 (40%), Gaps = 2/219 (0%) Query: 10 RRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVS 69 +L ++ +T E+ + L +++YS+ PFT K TN S Sbjct: 5 FNEILSEIKKSKTMPELEKRLLNAINYLGFEFYSIYQEEKYPFTTKKYVLITNLNIETAS 64 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHG--LRRGVTQYLMLPN 127 Y N D ++N + + ND + E + ++ ++ ++ + + Sbjct: 65 NYNQDNNHDSDQLMNGDYTFSIPSVCNDKISKNTDFTIEKSNSNKNEVKNSLSIKIKGYH 124 Query: 128 RALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEI 187 S +R + +L E + L ++ S RE E+ Sbjct: 125 GERSIFSVARKEGTISHNEILNKAGVLGILANECIKTFNNLKNKKDKIIIPTLSTREVEV 184 Query: 188 LRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPN 226 +RWT EGKTSAEIA IL IS TVNFH N+ +K+ PN Sbjct: 185 IRWTCEGKTSAEIADILDISTRTVNFHINNVMEKLVVPN 223 >UniRef50_A9F751 Possible LuxR family protein n=1 Tax=Phaeobacter gallaeciensis 2.10 RepID=A9F751_9RHOB Length = 205 Score = 137 bits (345), Expect = 4e-31, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 78/220 (35%), Gaps = 18/220 (8%) Query: 23 AEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPV 82 ++ +++ +SL V V + Y W+ +Y + + +DP Sbjct: 2 INDILRVHLRALEEISDKGFSLGVGFDGA---EPVFMKSTYSREWIDHYLVQRYFDLDPT 58 Query: 83 LNPENFSQGHLMWNDDL--FSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSA 140 ++ + G W D + + ++ A GL G T + + G +S CS Sbjct: 59 IHFGKSATGFTTWGDLRRHYPTSNKFFDDAARFGLDCGNTLSIHVD----GQVSILSCSG 114 Query: 141 REIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEI 200 + + + ++ S+ A+ E + K+++R G EI Sbjct: 115 PKW----GDTERRLAKAALYSIHAVHHRESCRYTIKEKS-----KDVIRLMCTGYQDREI 165 Query: 201 AMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 A L + TV ++ + + A + Q+ GLI Sbjct: 166 AERLGVKLETVRQRRQTAMQAVEATSTAQLISLVIKYGLI 205 >UniRef50_Q4KAK4 Transcriptional regulator, LuxR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KAK4_PSEF5 Length = 240 Score = 137 bits (345), Expect = 4e-31, Method: Composition-based stats. Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 8/222 (3%) Query: 23 AEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPV 82 +E+ E+E + E+ S +R + V +Y AW Y+A+ F +DP+ Sbjct: 23 CDEIRTELERETNHTEF---SFILRSDLKSHSKVVYNIDSYSYAWRRDYEAEKFWIVDPI 79 Query: 83 LN-PENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAR 141 L +W+DD F E++ +A + +G G++ L G LS + Sbjct: 80 LKIHSPTPYFPTIWSDD-FIESKLFLQAGKDYGFLSGMSIGLPCSFGNYGVLSIASLKQG 138 Query: 142 EIPILSDELQLKMQLLVRESLMALMRLNDEIVM---TPEMNFSKREKEILRWTAEGKTSA 198 + + L V L+ + + + + RE +ILR+TA+G +S Sbjct: 139 SLQGVDPLDWSACVLKVYAKLIDYINRQHSLQRIFNDHQQALNDREIDILRYTADGMSST 198 Query: 199 EIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 +IAM + +S++++++H + +K+++PNK Q A G I Sbjct: 199 DIAMRMHLSKSSIDYHIAKILQKLDSPNKHQALALAIKKGKI 240 >UniRef50_C9D313 Transcriptional regulator AhyR/asaR family n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9D313_9RHOB Length = 229 Score = 137 bits (345), Expect = 4e-31, Method: Composition-based stats. Identities = 57/235 (24%), Positives = 87/235 (37%), Gaps = 25/235 (10%) Query: 20 METAEEVYHEIELQAQQLEYDYYSLCVRH-PVPFTRPKVAFYTNYPEAWVSYYQAKNFLA 78 + + VY ++ Q Q L YDY + H P F P++ E V + ++ Sbjct: 5 ADLVDAVYADLGPQVQGLVYDYSPVPFSHEPGRFVLPEIIEARGAAEVLVDDWCGRSLYR 64 Query: 79 IDPVLNPENFSQGHLMWN-----------DDLFSEAQPLWEAARAHGLRRGVTQYLMLPN 127 DPV +W+ D + + + E L RG+T L LP Sbjct: 65 ADPVQRRAAKILNPFVWSYHAEECSVIREDLGQGDVREVRERLLDWTLGRGMTVPLHLPG 124 Query: 128 RALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMA--LMRLNDEIVMTPEMNFSKREK 185 R LS E + M +L R +L A L + + RE Sbjct: 125 RGFATLSA-----------FVEGRADMDMLARFALQAFELQDRISVELRQARGPLTLREA 173 Query: 186 EILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E L TA G ++ +IA L+ SE+ V H + K+ A N++ A G I Sbjct: 174 ECLSHTAAGLSAKQIAHELNRSESMVVKHLQAAASKLGARNRSHAVAIATRQGWI 228 >UniRef50_Q28PZ4 Transcriptional regulator, LuxR family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28PZ4_JANSC Length = 267 Score = 135 bits (341), Expect = 9e-31, Method: Composition-based stats. Identities = 37/243 (15%), Positives = 73/243 (30%), Gaps = 19/243 (7%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSLCV----RHPVPFTRPKVAFYTNYPEAWVS 69 L + M T E+++ +D + TN P +V Sbjct: 4 LRPYLEMTTVEDLWSHHTKTLASYGFDRVFYGFNAFRGAGLYDNPEDALLLTNMPTDYVE 63 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWND--------DLFSEAQPLWEAARAHGLRRGVTQ 121 Y ++ + G W D + H + G T Sbjct: 64 AYVDGGMFRDGVMMRWATENVGAASWRDVYMAMANDAPSKGELAMRAMNEKHDITAGYTI 123 Query: 122 Y----LMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPE 177 + N +G E + E ++ + + + +++L Sbjct: 124 SFPMAIKNANAGIGMAVKKGMGQDEADAIWREHGEDIETICHVAHLCILQL---PATGQR 180 Query: 178 MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAAT 237 + R+ E+L A+GKT A+IA++L + T+ H + + + Q A+ Sbjct: 181 KLLTPRQSEVLELVADGKTMADIALLLERNVATIEKHLRGARDALGVETTAQAVRKASIL 240 Query: 238 GLI 240 I Sbjct: 241 NQI 243 >UniRef50_A4EXT1 Possible LuxR family protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EXT1_9RHOB Length = 207 Score = 135 bits (340), Expect = 1e-30, Method: Composition-based stats. Identities = 54/220 (24%), Positives = 87/220 (39%), Gaps = 16/220 (7%) Query: 23 AEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPV 82 AEE+ + + L YS+ + + Y +AWV+ Y + F+ DP Sbjct: 2 AEELQNSLFKVLSNLSEVGYSVGLGF---IGFEPHYVKSTYSKAWVARYVERLFIQTDPT 58 Query: 83 LNPENFSQGHLMWND--DLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSA 140 + GH+ W +L+ E++ ++ A GLR G T L + G +S CS Sbjct: 59 VQFGLSRTGHVTWKQLQELYPESKTFFDEAALFGLRHGNTLSLRID----GQISVLSCSG 114 Query: 141 REIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEI 200 +E +L+M +L L L + + +R K++L G EI Sbjct: 115 SPW----NEQELRM---ADAALRGLAVLLSKPREGRDFGLPERVKDVLALMVSGARDQEI 167 Query: 201 AMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 A ILSI TV ++ + N Q+ GLI Sbjct: 168 AEILSIKIETVRARRQLAFQLTNTRTIAQLISEVIKNGLI 207 >UniRef50_A9GRC0 Response regulator n=2 Tax=Phaeobacter gallaeciensis RepID=A9GRC0_9RHOB Length = 265 Score = 135 bits (340), Expect = 1e-30, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 89/259 (34%), Gaps = 44/259 (16%) Query: 7 FSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEA 66 W + +R + + ++ + + +DY V R +TN P Sbjct: 1 MDWTD--IDSLERCNSTDALWAQALQIFATMGFDYAIYL---TVEGDRSHPHIHTNLP-- 53 Query: 67 WVSYYQAKNFLAIDPVLNPENFSQGHLMW-----NDDLFSEAQPL---WEAARAHGLRRG 118 Y+ DP L+ S +D + EA+ + EA+ G R G Sbjct: 54 --QIYEQLP-SHRDPFLDHCCNSYEPQFTGTEFLSDHPYLEAEEMAFIREASAKTGFRAG 110 Query: 119 VTQYLML-PNRALGFLSFSRCSAREIPILS----DELQLKMQLLVRESLMALMRLNDEIV 173 + + L + G + +R+ I + + L++ + L + Sbjct: 111 IAIPVRLQGSDRFGGFNLGTARSRDSFIAHVTGKTDSLRFLCLIIHRRMEELRQTASSPA 170 Query: 174 MTPEMN---------------------FSKREKEILRWTAEGKTSAEIAMILSISENTVN 212 P S RE+E+L ++G TS E A + IS +TV+ Sbjct: 171 ANPYEPDAEGAGFDRPLIAPPPAALTRLSPREREVLYLFSQGLTSKECAAVCKISPHTVS 230 Query: 213 FHQKNMQKKINAPNKTQVA 231 + ++ +K+N N+ + Sbjct: 231 EYANSIYRKLNVRNRVEAI 249 >UniRef50_A3JLR6 Transcriptional regulator, LuxR family protein n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JLR6_9RHOB Length = 203 Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 70/181 (38%), Gaps = 10/181 (5%) Query: 60 YTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGV 119 ++P+AWV +Y DP + ++G + W++ + + +A H LR G Sbjct: 33 INSFPQAWVDHYTVMGLAVQDPFMRWVYQNEGTVRWSELDLPDPAGVQQAYIEHNLRYGC 92 Query: 120 TQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMN 179 ++ SF + + + EL Q L + + + Sbjct: 93 LVSVLDALSGAPTRSFGIFARNDREFKTSELAKLQQSL----------RGAKPGIDDKPV 142 Query: 180 FSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 ++ + E LR + GK EIA L+ISE+ V + I A TQ AA GL Sbjct: 143 LTEAQIEALRLLSNGKRFKEIAHELNISESAVKARLRAAMTNIGAKTATQATSKAARLGL 202 Query: 240 I 240 + Sbjct: 203 L 203 >UniRef50_B0SZK2 Transcriptional regulator, LuxR family n=4 Tax=Alphaproteobacteria RepID=B0SZK2_CAUSK Length = 257 Score = 133 bits (334), Expect = 7e-30, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 86/244 (35%), Gaps = 23/244 (9%) Query: 15 LRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPE-----AWVS 69 +R+ + + + + Y + P + P W+ Sbjct: 6 EEIERLARVAALAERVRDLGRGVGLPYVAASADISSP---EPMLGLDGKPLAETIFEWLD 62 Query: 70 ----YYQAKNFLAIDPVLNPENFSQGHLM--------WNDDLFSEAQPLWEAARAHGLRR 117 Y++ + F P + + W EA + EAA+A G+ Sbjct: 63 ASLYYWRDRAFALRAPFILAARCTAEPFFYHQGRFASWRPLARLEAIEVGEAAKAFGVEA 122 Query: 118 GVTQYLMLPNRALGFLSFSRCSA-REIPILSDELQLKMQLLVRESLMALMRLNDEIVMTP 176 + L +G + ++ ++P L ++ + A D+ V P Sbjct: 123 AIIAPAHLTGGVIGAVVWASAEPLADLPALYAARSDELHGAALRLVSAYRDGCDDDV--P 180 Query: 177 EMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAA 236 + +KRE + L+W A GKT A+IA I+ I+ TV FH +N K+ + Q A Sbjct: 181 PVRLTKREIQCLKWAAAGKTDADIAQIIGIAGPTVRFHVQNAALKLRVAGRAQAVHRATG 240 Query: 237 TGLI 240 G I Sbjct: 241 LGYI 244 >UniRef50_B5ZP35 Transcriptional regulator, LuxR family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B5ZP35_RHILW Length = 251 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 70/237 (29%), Gaps = 9/237 (3%) Query: 13 MLLRFQRMETAEE---VYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVS 69 + F + E + + + + + Y + W Sbjct: 8 LPEAFHCIRNLHEIGHLSAIVHQLRALVGAANLAYQALFIPGRMANERLVAETYSDRWKK 67 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWNDDL--FSEAQPLWEAARAHGLR-RGVTQYLMLP 126 YQ+KN+L DP+ + L W E + A HG+ G++ L+ Sbjct: 68 LYQSKNYLRTDPIEIAARKTSQPLDWGHLRSASKETASFFAEAERHGVGNNGISIPLVDA 127 Query: 127 NRALGFLSFSRC-SAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPE--MNFSKR 183 S + + + + + + + + P + + Sbjct: 128 QAGRALFSVTSNLEGEDWATFKGRALPSLIQIGKAIQLRTAEIETKPAAQPSRVAALTTK 187 Query: 184 EKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 E + L G +I + S+S V + +K++A A A G+I Sbjct: 188 ETDYLALYVAGYAIKQIGDMRSVSGTAVRAALNSATEKLDARGPRHAGYLAVALGII 244 >UniRef50_C8RZ53 Transcriptional regulator, LuxR family n=1 Tax=Rhodobacter sp. SW2 RepID=C8RZ53_9RHOB Length = 267 Score = 131 bits (329), Expect = 3e-29, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 85/242 (35%), Gaps = 13/242 (5%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTR----PKVAFYTNYPEAW 67 +L + EV+ + L + + + T F T + Sbjct: 6 QLLGEIAHARSVNEVWALSTPYYRDLGFARVNYSFTRFMTDTTLGDPADALFLTTSSPEY 65 Query: 68 VSYYQAKNFLAIDPVLNPENFSQGHLMWN--------DDLFSEAQPLWEAARAHGLRRGV 119 + + F A P+ + + G W DL ++ + A G+ G+ Sbjct: 66 LRVFTRDRFYARTPLFHWALHNVGACTWRWVHEALAAGDLTADQAETVRSNIAMGVVAGI 125 Query: 120 TQYLMLPN-RALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEM 178 T R+ G L + + D Q L+ + M ++++ + T Sbjct: 126 TISFPSAAPRSKGGLGLIGDTCLSHDDVDDIWANHGQPLLAVANMMHLKISQLPMATRRR 185 Query: 179 NFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATG 238 N + R+++ L W A+GKT+ +I+ ++ IS V H + ++ + Q AA Sbjct: 186 NLTDRQRQALEWVADGKTTQDISQLMRISVAMVEKHLRLAREALEVDTTAQAVAKAALLN 245 Query: 239 LI 240 I Sbjct: 246 KI 247 >UniRef50_B0T7Q6 Transcriptional regulator, LuxR family n=1 Tax=Caulobacter sp. K31 RepID=B0T7Q6_CAUSK Length = 249 Score = 130 bits (327), Expect = 4e-29, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 88/243 (36%), Gaps = 14/243 (5%) Query: 12 TMLLRFQRMETAEEVYHE-IELQAQQLEYDYYSL-CVRHPVPFTRPKVAFYTNYPEAWVS 69 T L+R + + + + A+ + + + H +P A P +S Sbjct: 5 TALVRTESAACPAQAFRATLGDAARLCGFSQAAYMHLGHRLPRPEDSDAAAMETPRELIS 64 Query: 70 -------YYQAKNFLAIDPVLNPENFSQGHLMWN--DDLFSEAQPLWEAARAHGLRRGVT 120 Y+ + +LA DP+ + W+ D A+PL A A G+R G+ Sbjct: 65 SGGLDEALYRKRGYLAFDPLAVRAAKAFLPFAWSLADLADPNARPLARAFEAWGVRSGLI 124 Query: 121 QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVM---TPE 177 + ++F ++ L + L + L + T + Sbjct: 125 VPVQDSTAGPALVNFLHAESQSRAALDAGAEAARDGLALLTAARLHAAARASLPVHGTSD 184 Query: 178 MNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAAT 237 + RE ++LR A+G T E A L +S V FH K++ NKT A + Sbjct: 185 AGLNAREMQVLRLAAQGLTEMETAARLKLSRRGVQFHLSRAGAKLDTTNKTAAVARAISL 244 Query: 238 GLI 240 GLI Sbjct: 245 GLI 247 >UniRef50_D0HD87 Transcriptional regulator LuxR family n=4 Tax=Vibrio mimicus RepID=D0HD87_VIBMI Length = 224 Score = 129 bits (325), Expect = 7e-29, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 79/231 (34%), Gaps = 14/231 (6%) Query: 9 WRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWV 68 + + + E A ++ + + + +++ L V P + Sbjct: 5 RLFELSNQLRCTENATSIHDWFDELKKDISFEFSILGVFGERYSLEP---ICHGFSPTQF 61 Query: 69 SYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNR 128 S DP + S +M + P +G R + + Sbjct: 62 STCFGNKRPENDPFVAAFQQSGQGIM--ALMDPYNHP------DYGKRLLLAGQ-HGEKK 112 Query: 129 ALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEIL 188 A+ SF I + L + +S+ + + + RE E+L Sbjct: 113 AIFLTSFGNRHPSSDEIDTLYLLTPHLYMASDSIAQQSQQLHLPPPLNPL--TDRECELL 170 Query: 189 RWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGL 239 W GK++ EI+ +L+ISE TV +H +N+ +K+ N+T A G Sbjct: 171 PWLKLGKSNWEISRLLNISERTVKYHLQNIYRKLETHNRTHAIAKAIELGW 221 >UniRef50_Q5LSK3 Transcriptional regulator, LuxR family n=1 Tax=Ruegeria pomeroyi RepID=Q5LSK3_SILPO Length = 258 Score = 128 bits (322), Expect = 1e-28, Method: Composition-based stats. Identities = 42/244 (17%), Positives = 76/244 (31%), Gaps = 18/244 (7%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 +L + + + + + +L + P + ++ W+ Y Sbjct: 10 DLLESLSHIFDDAARWEHAVARLNEFGFK--ALNMGQFTPKSGILHWARSSMAPNWLKLY 67 Query: 72 QAKNFLAIDPVLNPENFSQGHLMWN------DDLFSEAQPLWEAARAHGLRRGVTQYLML 125 + D VL L + + A L+ HG R + + Sbjct: 68 AEGGYSDADLVLAQARQGPESLYIDSGRRLQESNSDTALALYSGLVEHGYRHVFSLIVPC 127 Query: 126 PNRALGFLSFSRCSAREIPILSDELQLKMQLLVRES---------LMALMRLNDEIVMTP 176 P L E E M++L + ++ Sbjct: 128 P-GNQAMLVALFTDHPEADSWMTEQSAGMRILATVIGTNLGPGTEHGQSSGQDLTPILGT 186 Query: 177 EMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAA 236 S+RE+E L A+G + +IA + ISE TV H K+ + K+ AP + A Sbjct: 187 TAPLSRREREALHLLADGLRNEQIAAAMKISEVTVRMHLKSARDKLRAPTREAALVRAMQ 246 Query: 237 TGLI 240 GL+ Sbjct: 247 MGLL 250 >UniRef50_A1B8E7 Transcriptional regulator, LuxR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B8E7_PARDP Length = 290 Score = 127 bits (319), Expect = 4e-28, Method: Composition-based stats. Identities = 35/240 (14%), Positives = 76/240 (31%), Gaps = 13/240 (5%) Query: 14 LLRFQRMETAEEVYHEIELQAQQLEYDYYSL----CVRHPVPFTRPKVAFYTNYPEAWVS 69 + + V+ + L + S + P ++Y + Sbjct: 7 IEIILAARSTAAVWQHYFARLASLGFPNVSYRAVRILEPPCGRMLDDGVLLSSYSPYLMQ 66 Query: 70 YYQAKNFLAIDPVLNPENFSQGHLMWN--------DDLFSEAQPLWEAARAHGLRRGVTQ 121 + + P+ ++G W+ L + + +G G Sbjct: 67 ELASLDLFESAPMHRWIIQNRGSESWDWMQRCRLAGRLSPREERAMDVFARYGHVAGYAV 126 Query: 122 YLMLPNRAL-GFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF 180 + + + S L +L+ S + +R++ E Sbjct: 127 GMGDDVERIRAGVIVSGTIGMRQDRLDALWAQHGRLVGALSGVMHLRISTLPHAERECVL 186 Query: 181 SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 + R++E+L + G T+ EIA IL ++ TV H + ++ + A Q AA++ I Sbjct: 187 TLRQREVLECISAGHTTQEIAQILEVTPATVEKHLRLARRALGAKTTAQAILLAASSKQI 246 >UniRef50_B7QYZ5 Transcriptional regulator, LuxR family protein n=1 Tax=Ruegeria sp. R11 RepID=B7QYZ5_9RHOB Length = 261 Score = 126 bits (318), Expect = 5e-28, Method: Composition-based stats. Identities = 51/238 (21%), Positives = 84/238 (35%), Gaps = 11/238 (4%) Query: 12 TMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYY 71 L + ++ +H + A ++ S+ V V T+ P W+ Y Sbjct: 24 DTLDALLFSQDQQDRWHAAQRAADKIGVK--SILVAQAVGIQGDIRWMNTDMPSDWIEEY 81 Query: 72 QAKNFLAIDP-VLNPENF-SQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLM----- 124 A ++ +DP VLN + +A E HGL+ L Sbjct: 82 LACGYVEVDPPVLNLSKQKGNMSVDCGVLHRGDASDKREWDLNHGLKAAGFGSLFCSCYK 141 Query: 125 LPNRALGFLSFSRCSA--REIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSK 182 F++ + + P ELQL LLV + + ++ Sbjct: 142 DATGYDRFVTLAYDGHHLEDQPASQVELQLFSALLVSTIERDTVAPGNGYQPVRPSPLTQ 201 Query: 183 REKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 R++E+L AEG +A IA L +SE V+ H N +K + A + A G I Sbjct: 202 RQREVLSLLAEGMMTARIAETLGLSEAAVSLHFANARKALGASTREHALALALTRGFI 259 >UniRef50_A9D9Y9 Putative transcriptional regulator protein, LuxR family n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D9Y9_9RHIZ Length = 208 Score = 126 bits (318), Expect = 5e-28, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 84/218 (38%), Gaps = 14/218 (6%) Query: 25 EVYHEIELQAQQLEYDYYSL--CVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPV 82 + + + A + +++ L P + N +A++ +A + DP+ Sbjct: 2 DFFRLFKALAAVHDSEHFVLVELSTDDKPLDLNRGHSLHNVSDAFLDA-EAVSAKRDDPL 60 Query: 83 LNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSARE 142 + S ++ G + V L L R R Sbjct: 61 VACLLTSTAPKSFDATTTKTP-----LIARCGSKSAVVVPLHTAVGKRFGLILLRNRERP 115 Query: 143 IPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAM 202 + + ++ + ++ L+ S+RE +I+ WT+EGKTS+EIA+ Sbjct: 116 LHSEVALIAYDASIVFQRYFEVVLSLDS------ISGLSEREIQIVSWTSEGKTSSEIAI 169 Query: 203 ILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI 240 IL +SE+TVN + + +K+ N+ Q+ A GLI Sbjct: 170 ILGLSEHTVNSYIAAILRKLQVVNRAQMVASALRNGLI 207 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 126 bits (318), Expect = 5e-28, Method: Composition-based stats. Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 3/131 (2%) Query: 113 HGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMA---LMRLN 169 H L+ G YL+ A + R A L ++ + R + Sbjct: 127 HALQTGAMGYLLKEMDADALIEAVRVVAEGGSYLHPKVTHNLVKEYRRLVAGEGGGKEKQ 186 Query: 170 DEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQ 229 ++ V P ++RE E+L+ A+GK++ IA L ISE TV H N+ +K+N ++TQ Sbjct: 187 NQDVCRPYHLLTRRECEVLQLLADGKSNKGIADALYISEKTVKNHVSNILQKLNVNDRTQ 246 Query: 230 VACYAAATGLI 240 A G + Sbjct: 247 AVVVAIKNGWV 257 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 126 bits (317), Expect = 7e-28, Method: Composition-based stats. Identities = 39/132 (29%), Positives = 58/132 (43%), Gaps = 7/132 (5%) Query: 109 AARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRL 168 A LR GV YL+ + R R L+ + LV ++L L Sbjct: 100 DALMEALRAGVAGYLLKDASRREIIGAVRQVLRGEAFLNPD-------LVLQTLRRLAHA 152 Query: 169 NDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKT 228 TP + RE+++LR +GKT+ EIA L IS TV H +++ K+ ++T Sbjct: 153 TPTDDATPIEPLTPREQQVLRLLMQGKTNREIARELIISPGTVKVHVEHIIAKLGVSDRT 212 Query: 229 QVACYAAATGLI 240 Q A A GL+ Sbjct: 213 QAAVRALELGLV 224 >UniRef50_Q28US6 Transcriptional regulator, LuxR family n=4 Tax=Rhodobacterales RepID=Q28US6_JANSC Length = 203 Score = 126 bits (316), Expect = 9e-28, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 68/186 (36%), Gaps = 14/186 (7%) Query: 55 PKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHG 114 + YP+ W Y +K + DP L G W+ + + + + +G Sbjct: 32 SPLIMVNTYPDVWQEVYTSKLYGLRDPTLAWGLSHTGTRRWSQIGLPDPFGILQESADYG 91 Query: 115 LRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVM 174 LR G+ + + + + S + DE++L + +V + Sbjct: 92 LRYGMIASI----GPMSSRTVAGASRADREFTDDEMEL-VYRIVHRMHD---------LS 137 Query: 175 TPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYA 234 P SK + + L+ AEG A A L ISE+ + ++K+ A + A Sbjct: 138 EPPARLSKAQADALKCIAEGDRHAAAAAKLGISESAFKARLTSARQKLMARTTAEAVQRA 197 Query: 235 AATGLI 240 GLI Sbjct: 198 KEYGLI 203 >UniRef50_A4U0F1 Regulatory protein, LuxR n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U0F1_9PROT Length = 253 Score = 125 bits (314), Expect = 1e-27, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 84/251 (33%), Gaps = 16/251 (6%) Query: 5 DFFSWRR-----TMLLRFQRMETAEEVYHEIELQAQQLEYD--YYSLCVRHPVPFTRPKV 57 + F R+ + F++ +E++ + +Y + Sbjct: 2 NDFDRRQSRMILDAISDFRQSRDPDEMWSHVHKSLAPFGVGGLWYGFEMMPQSGSYWRDH 61 Query: 58 ---AFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMW-----NDDLFSEAQPLWEA 109 + +V A D + ++W +DD + + +E Sbjct: 62 KSGLMLESLRSGYVEAKIATGMADADFYYQAAKCNPAPIIWGDLSLSDDADEQERRSFEV 121 Query: 110 ARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLN 169 G+ G T + G +FS + D + + +R+ A Sbjct: 122 DCDFGILTGATLPASFADG-FGASAFSVHTPDLSFAGFDRMWRENGEAIRQIACAFDICM 180 Query: 170 DEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQ 229 E M S RE+EIL EG +IA +LS+ E TV H ++ ++K+ A TQ Sbjct: 181 REDHMPDFFPLSPREQEILLRLTEGLRPQQIAFLLSLHEGTVEKHIESARRKLKAATVTQ 240 Query: 230 VACYAAATGLI 240 A GLI Sbjct: 241 AVATALIFGLI 251 >UniRef50_A3VE32 Autoinducer-binding transcriptional regulator, LuxR family protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VE32_9RHOB Length = 253 Score = 125 bits (314), Expect = 1e-27, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 73/215 (33%), Gaps = 18/215 (8%) Query: 34 AQQLEYDYYSLCVR----HPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFS 89 +D F TN+ + + + P+ + Sbjct: 1 MATFGFDRLIYGYTRFATPNSVGELIDALFLTNHNPTYFRQFIEERMFLHAPLTRWAREN 60 Query: 90 QGHL-----MWN--DDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRA-LGFLSFSRCSA- 140 + +W +DL + + RA + G T + + + + Sbjct: 61 ESGYCSWGALWTRPEDLTEKELEVIAFNRAMNVTAGYTVAVPTASDRSHALFALTGAHGL 120 Query: 141 --REIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSA 198 +++ + E ++ +L + + L + T SKR+ E+L W +EGK++ Sbjct: 121 TQQDLDEIWAENGKEIDVLCNIVHLKIASL---PIETNRPKLSKRQLEVLEWVSEGKSNQ 177 Query: 199 EIAMILSISENTVNFHQKNMQKKINAPNKTQVACY 233 ++A I+ +S T+ H + ++K+ Q Sbjct: 178 DVATIMDVSVPTIEKHLRLAREKLGVDTTAQAIAK 212 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.311 0.153 0.466 Lambda K H 0.267 0.0467 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,689,311,735 Number of Sequences: 3077464 Number of extensions: 80302621 Number of successful extensions: 275980 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 10589 Number of HSP's successfully gapped in prelim test: 1091 Number of HSP's that attempted gapping in prelim test: 262810 Number of HSP's gapped (non-prelim): 12263 length of query: 240 length of database: 1,040,396,356 effective HSP length: 125 effective length of query: 115 effective length of database: 655,713,356 effective search space: 75407035940 effective search space used: 75407035940 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 91 (39.5 bits)