 |
| Job Description | P07026 | | Confidence | 95.68% | Date | Thu Jan 5 11:00:07 GMT 2012 |
| Rank | 72 | Aligned Residues | 43 |
| % Identity | 19% | Template | c3r0aB_ |
| PDB info |
PDB header:transcription regulator | Chain: B: PDB Molecule:putative transcriptional regulator; |
PDBTitle: possible transcriptional regulator from methanosarcina mazei go1 (gi2 21227196)
|
| Resolution | 2.31 Å |
|
|   |   |
179 | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | |
|
|
|
. | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . |
| Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
N | F | S | K | R | E | K | E | I | L | R | W | T | A | E | . |
. |
. |
. |
G | K | T | S | A | E | I | A | M | I | L | S | I | S | E | N | T | V | N | F | H | Q | K | N | M | Q | K | K |
| Query Conservation |   |
  |
|
|   |
|
|   |
|
|
|   |
|
|
|   | . | . | . | . |
|   |
|   |   |
|
|
|   |   |
|   |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|
|   |   |
|   |   |
|   |   |   |
|
|
|   |
|   |   |
|   |   |   |
| Template Sequence |   |
N | L | T | K | A | D | L | N | V | X | K | S | F | L | N | E | P | D | R | W | I | D | T | D | A | L | S | K | S | L | K | L | D | V | S | T | V | Q | R | S | V | K | K | L | H | E | K |
| Template Known Secondary structure |   |
T |
|
|  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
|
| B |
|  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|