BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (297 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_A7FF10 Chromosome initiation inhibitor n=169 Tax=Gammap... 556 e-157 UniRef50_P70773 Chromosome initiation inhibitor n=6 Tax=Gammapro... 296 6e-79 UniRef50_Q7MHL5 Chromosome initiation inhibitor n=55 Tax=Vibrion... 283 5e-75 UniRef50_Q0I356 Chromosome initiation inhibitor n=6 Tax=Gammapro... 270 3e-71 UniRef50_Q47WN2 Chromosome initiation inhibitor n=2 Tax=Alteromo... 253 4e-66 UniRef50_C4KCF0 Transcriptional regulator, ArgP, LysR family n=1... 221 3e-56 UniRef50_Q2BJ31 Chromosome replication initiation inhibitor prot... 213 7e-54 UniRef50_Q7NUX8 Inhibitor of chromosome initiation IciA n=2 Tax=... 208 2e-52 UniRef50_C1D4J6 IciA n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 205 2e-51 UniRef50_D1U749 Transcriptional regulator, LysR family n=1 Tax=D... 203 6e-51 UniRef50_C6BY65 Transcriptional regulator, LysR family n=1 Tax=D... 202 1e-50 UniRef50_Q30VM9 Transcriptional regulator, LysR family n=1 Tax=D... 201 3e-50 UniRef50_B8FDR1 Transcriptional regulator, ArgP, LysR family n=2... 201 3e-50 UniRef50_B8DQE7 Transcriptional regulator, LysR family n=1 Tax=D... 197 4e-49 UniRef50_Q02H78 Chromosome initiation inhibitor n=28 Tax=Gammapr... 195 2e-48 UniRef50_C7LQL1 Transcriptional regulator, ArgP, LysR family n=1... 192 1e-47 UniRef50_A3D5N6 Transcriptional regulator, LysR family n=18 Tax=... 191 2e-47 UniRef50_A3MG84 Chromosome initiation inhibitor n=54 Tax=Proteob... 184 4e-45 UniRef50_A1VG08 Transcriptional regulator, LysR family n=3 Tax=D... 180 5e-44 UniRef50_B2SEE8 Chromosome replication initiation inhibitor prot... 179 8e-44 UniRef50_A6Y5L9 Transcriptional regulator n=2 Tax=Vibrio cholera... 177 5e-43 UniRef50_Q6FDJ8 Inhibitor of replication initiation (Transcripti... 175 2e-42 UniRef50_A3Y969 Chromosome replication initiation inhibitor prot... 173 6e-42 UniRef50_C3JN11 Transcriptional regulator, LysR family n=2 Tax=R... 173 6e-42 UniRef50_C8WDF3 Transcriptional regulator, ArgP, LysR family n=3... 172 1e-41 UniRef50_B1Y350 Transcriptional regulator, LysR family n=2 Tax=P... 169 1e-40 UniRef50_A4BE26 Chromosome replication initiation inhibitor prot... 169 1e-40 UniRef50_B9JYX8 Transcriptional regulator LysR family n=9 Tax=Al... 169 1e-40 UniRef50_C1SIA9 Transcriptional regulator, ArgP family n=1 Tax=D... 166 6e-40 UniRef50_Q4UXK0 Transcriptional regulator lysR family n=8 Tax=Xa... 166 9e-40 UniRef50_D0STT3 DnaA/argK transcriptional regulator n=1 Tax=Acin... 166 1e-39 UniRef50_C7RVK7 Transcriptional regulator, LysR family n=1 Tax=C... 166 1e-39 UniRef50_Q2T9B3 Transcriptional regulator, LysR family n=54 Tax=... 164 3e-39 UniRef50_A1TMH4 Transcriptional regulator, LysR family n=9 Tax=c... 163 8e-39 UniRef50_Q93JR1 AttR protein n=1 Tax=Rhodococcus fascians RepID=... 161 3e-38 UniRef50_A2SLN2 Transcriptional regulator, LysR family n=14 Tax=... 160 5e-38 UniRef50_B4SNX8 Transcriptional regulator, LysR family n=12 Tax=... 160 5e-38 UniRef50_B8H9B0 Transcriptional regulator, ArgP, LysR family n=5... 159 1e-37 UniRef50_C7NH55 Transcriptional regulator, ArgP family n=1 Tax=K... 157 4e-37 UniRef50_C2AIB0 Transcriptional regulator, ArgP family n=1 Tax=T... 156 8e-37 UniRef50_D1BHX4 Transcriptional regulator, ArgP family n=1 Tax=S... 155 2e-36 UniRef50_A1R3I4 Putative transcriptional regulator, LysR family ... 154 4e-36 UniRef50_C6DHV2 Transcriptional regulator, ArgP, LysR family n=4... 153 8e-36 UniRef50_B4S2Z4 Chromosome replication initiation inhibitor prot... 153 9e-36 UniRef50_Q123B5 Transcriptional regulator, LysR family n=3 Tax=C... 152 2e-35 UniRef50_D0L7H5 Transcriptional regulator, ArgP family n=1 Tax=G... 152 2e-35 UniRef50_Q2RWN3 Transcriptional regulator, LysR family n=20 Tax=... 152 2e-35 UniRef50_B9B8W0 Transcriptional regulator, LysR family n=3 Tax=B... 151 3e-35 UniRef50_A3K0M9 Chromosome replication initiation inhibitor prot... 151 3e-35 UniRef50_Q13XH7 Transcriptional regulator, LysR family n=4 Tax=B... 150 4e-35 UniRef50_Q1GFE2 Transcriptional regulator, LysR family n=4 Tax=R... 150 5e-35 UniRef50_Q46UY3 Regulatory protein, LysR:LysR, substrate-binding... 149 1e-34 UniRef50_C7QYI6 Transcriptional regulator, ArgP, LysR family n=1... 149 2e-34 UniRef50_P67665 Uncharacterized HTH-type transcriptional regulat... 146 9e-34 UniRef50_B9NY95 Chromosome replication initiation inhibitor prot... 146 1e-33 UniRef50_P94632 Lysine export transcriptional regulatory protein... 145 1e-33 UniRef50_D2NQ78 Transcriptional regulator n=2 Tax=Rothia mucilag... 143 7e-33 UniRef50_B9JHJ0 Transcriptional regulator protein n=1 Tax=Agroba... 142 1e-32 UniRef50_C6XMP9 Transcriptional regulator, ArgP, LysR family n=1... 133 9e-30 UniRef50_A0JRX4 Transcriptional regulator, LysR family n=2 Tax=M... 131 2e-29 UniRef50_C7QF32 Transcriptional regulator, ArgP, LysR family n=3... 131 3e-29 UniRef50_A3TNV7 Chromosome replication initiation inhibitor prot... 129 1e-28 UniRef50_C3PFW1 Lysine export transcriptional regulatory protein... 128 2e-28 UniRef50_C5C7I2 Transcriptional regulator n=3 Tax=Actinomycetale... 126 8e-28 UniRef50_A9DKT8 Chromosome replication initiation inhibitor prot... 118 2e-25 UniRef50_UPI0001BC2B66 transcriptional regulator, ArgP, LysR fam... 115 2e-24 UniRef50_B2JXM7 Transcriptional regulator, LysR family n=4 Tax=B... 114 3e-24 UniRef50_A4JNN0 Transcriptional regulator, LysR family n=1 Tax=B... 109 1e-22 UniRef50_B9TIZ9 Chromosome initiation inhibitor, putative n=1 Ta... 105 1e-21 UniRef50_C9YG90 Chromosome initiation inhibitor n=1 Tax=Curvibac... 97 5e-19 UniRef50_UPI000190906C chromosome replication initiation inhibit... 91 3e-17 UniRef50_A4EVI2 Chromosome replication initiation inhibitor prot... 77 8e-13 UniRef50_C5EHA6 Transcriptional regulator n=1 Tax=Clostridiales ... 72 2e-11 UniRef50_A7JY25 Transcriptional regulators LysR family n=9 Tax=V... 69 2e-10 UniRef50_B0S334 Transcriptional regulator LysR family n=2 Tax=Fi... 66 1e-09 UniRef50_B8CNJ7 Regulatory protein, LysR:LysR, substrate-binding... 66 1e-09 UniRef50_C7QH07 Transcriptional regulator, LysR family n=1 Tax=C... 66 2e-09 UniRef50_C8WTC6 Transcriptional regulator, LysR family n=1 Tax=A... 66 2e-09 UniRef50_B6A0Z6 Transcriptional regulator, LysR family n=1 Tax=R... 65 2e-09 UniRef50_UPI0000382587 COG0583: Transcriptional regulator n=1 Ta... 64 7e-09 UniRef50_A3NC71 Transcriptional activator MetR n=79 Tax=Proteoba... 64 8e-09 UniRef50_D2T424 Carbapenem-hydrolyzing beta-lactamase transcript... 62 3e-08 UniRef50_A9IQK9 Transcriptional regulator, LysR-family n=6 Tax=B... 61 5e-08 UniRef50_A3JQF3 Transcriptional regulator, LysR family protein n... 60 6e-08 UniRef50_B2VHX3 LysR-family transcriptional regulator n=2 Tax=En... 60 7e-08 UniRef50_D0D8S3 Transcriptional regulator, LysR family n=1 Tax=C... 60 1e-07 UniRef50_B8IBH9 Transcriptional regulator, LysR family n=1 Tax=M... 59 2e-07 UniRef50_B9K5H2 Transcriptional regulator LysR family n=1 Tax=Ag... 59 2e-07 UniRef50_A6D585 Transcriptional regulator n=5 Tax=Vibrionales Re... 59 2e-07 UniRef50_Q2S997 Transcriptional regulator n=1 Tax=Hahella chejue... 59 2e-07 UniRef50_Q7WNK1 LysR-family transcriptional regulator n=1 Tax=Bo... 59 2e-07 UniRef50_A3Y562 Transcriptional regulator, LysR family protein n... 58 4e-07 UniRef50_Q28KN5 Transcriptional regulator, LysR family n=1 Tax=J... 57 5e-07 UniRef50_B5EII3 Transcriptional regulator, LysR family n=1 Tax=G... 57 7e-07 UniRef50_B7RUK1 LysR substrate binding domain protein n=1 Tax=ma... 57 7e-07 UniRef50_B6R8G3 Transcriptional regulator n=2 Tax=Rhodobacterace... 57 8e-07 UniRef50_Q390C5 Transcriptional regulator, LysR family n=7 Tax=B... 57 9e-07 UniRef50_C9NT30 Transcriptional regulator LysR family n=6 Tax=Vi... 56 1e-06 UniRef50_B2IKM7 Transcriptional regulator, LysR family n=3 Tax=P... 56 1e-06 UniRef50_A0LD87 Transcriptional regulator, LysR family n=1 Tax=M... 56 1e-06 UniRef50_A7K158 Transcriptional regulator LysR family n=4 Tax=Vi... 56 1e-06 UniRef50_Q212R5 Transcriptional regulator, LysR family n=1 Tax=R... 56 2e-06 UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Prote... 56 2e-06 UniRef50_A5V6Y9 Transcriptional regulator, LysR family n=1 Tax=S... 56 2e-06 UniRef50_B9M4G8 Transcriptional regulator, LysR family n=4 Tax=G... 56 2e-06 UniRef50_Q39LC6 Transcriptional regulator, LysR family n=1 Tax=B... 55 2e-06 UniRef50_A1VWK7 Transcriptional regulator, LysR family n=5 Tax=C... 55 2e-06 UniRef50_B8IVZ6 Transcriptional regulator, LysR family n=1 Tax=M... 55 3e-06 UniRef50_B2HXH8 Transcriptional regulator n=10 Tax=Acinetobacter... 55 3e-06 UniRef50_A1WLY5 Transcriptional regulator, LysR family n=1 Tax=V... 55 3e-06 UniRef50_Q123P6 Transcriptional regulator, LysR family n=1 Tax=P... 55 3e-06 UniRef50_Q1QXA1 Transcriptional regulator, LysR family n=1 Tax=C... 55 3e-06 UniRef50_A6BDD9 Putative uncharacterized protein n=1 Tax=Dorea l... 55 3e-06 UniRef50_C8X447 Transcriptional regulator, LysR family n=1 Tax=D... 55 3e-06 UniRef50_B3E6S3 Transcriptional regulator, LysR family n=1 Tax=G... 55 3e-06 UniRef50_A8GDW7 Transcriptional regulator, LysR family n=5 Tax=E... 55 4e-06 UniRef50_A5KVN8 Transcriptional regulator n=4 Tax=Gammaproteobac... 54 5e-06 UniRef50_C1DLB3 LysR family transcriptional regulator protein n=... 54 5e-06 UniRef50_B0SWU8 Transcriptional regulator, LysR family n=2 Tax=C... 54 5e-06 UniRef50_B1JZS0 Transcriptional regulator, LysR family n=19 Tax=... 54 5e-06 UniRef50_B7K2F2 Transcriptional regulator, LysR family n=8 Tax=C... 54 5e-06 UniRef50_A9G1Q3 Transcriptional regulatory protein n=1 Tax=Phaeo... 54 5e-06 UniRef50_Q7MFW7 Transcriptional regulator n=2 Tax=Vibrio vulnifi... 54 5e-06 UniRef50_A4F1D5 Transcriptional activator AmpR n=1 Tax=Roseobact... 54 5e-06 UniRef50_Q7W0V6 Putative lysR-family transcriptional regulator n... 54 5e-06 UniRef50_A9KT75 Transcriptional regulator, LysR family n=12 Tax=... 54 6e-06 UniRef50_D2B8Z1 Transcriptional regulator, LysR family n=1 Tax=S... 54 6e-06 UniRef50_A9HMX3 LysR family transcriptional regulatory protein n... 54 7e-06 UniRef50_Q124R6 Transcriptional regulator, LysR family n=3 Tax=B... 54 7e-06 UniRef50_B9Z4C8 Transcriptional regulator, LysR family n=1 Tax=L... 54 7e-06 UniRef50_C1D4D4 Transcriptional regulator, LysR family n=1 Tax=L... 54 7e-06 UniRef50_C0Z9U4 Transcriptional regulator n=1 Tax=Brevibacillus ... 54 8e-06 UniRef50_B6GE14 Putative uncharacterized protein n=1 Tax=Collins... 54 8e-06 UniRef50_A4TW42 LysR-family transcriptional regulator n=1 Tax=Ma... 54 9e-06 UniRef50_B9QRV8 LysR substrate binding domain protein n=1 Tax=La... 54 9e-06 UniRef50_A3VZZ4 Transcriptional regulator, LysR family protein n... 54 9e-06 UniRef50_Q0KCL9 Transcriptional regulator, LysR-family n=2 Tax=C... 54 1e-05 UniRef50_A3YH31 Transcriptional regulator, LysR family protein n... 53 1e-05 UniRef50_A5W5M0 Transcriptional regulator, LysR family n=23 Tax=... 53 1e-05 UniRef50_A8TZA8 Transcriptional regulator, LysR family protein n... 53 1e-05 UniRef50_A2VZL6 Transcriptional regulator n=1 Tax=Burkholderia c... 53 1e-05 UniRef50_Q1LMH3 Transcriptional regulator, LysR family n=1 Tax=C... 53 1e-05 UniRef50_A1SB05 Transcriptional regulator, LysR family n=18 Tax=... 53 1e-05 UniRef50_P77333 Uncharacterized HTH-type transcriptional regulat... 53 1e-05 UniRef50_Q2BZ62 Transcriptional activator AmpR n=1 Tax=Photobact... 53 1e-05 UniRef50_B1Y7G6 Transcriptional regulator, LysR family n=10 Tax=... 53 1e-05 UniRef50_B7RZF1 Putative lysR substrate binding domain protein n... 53 1e-05 UniRef50_Q07TP5 Transcriptional regulator, LysR family n=10 Tax=... 53 1e-05 UniRef50_C5CP23 Transcriptional regulator, LysR family n=4 Tax=P... 53 1e-05 UniRef50_Q4KF30 Transcriptional regulator, LysR family n=5 Tax=P... 53 1e-05 UniRef50_Q2SFZ0 Transcriptional regulator n=1 Tax=Hahella chejue... 53 1e-05 UniRef50_Q0HUM5 Transcriptional regulator, LysR family n=20 Tax=... 53 1e-05 UniRef50_A1S908 Putative LysR-family transcriptional regulator n... 53 1e-05 UniRef50_D0BX38 Transcriptional regulator n=2 Tax=Acinetobacter ... 53 2e-05 UniRef50_P52676 Carbapenem-hydrolyzing beta-lactamase transcript... 53 2e-05 UniRef50_A0P0B3 Transcriptional regulator n=1 Tax=Labrenzia aggr... 53 2e-05 UniRef50_Q6F9H5 Putative transcriptional regulator n=1 Tax=Acine... 52 2e-05 UniRef50_B5XS26 Transcriptional regulator, LysR family n=6 Tax=P... 52 2e-05 UniRef50_Q218F8 Transcriptional regulator, LysR family n=12 Tax=... 52 2e-05 UniRef50_Q9RH96 LeuO homolog (Fragment) n=28 Tax=Salmonella ente... 52 2e-05 UniRef50_C3K0C2 Putative LysR family regulatory protein n=1 Tax=... 52 2e-05 UniRef50_A1U7B1 Transcriptional regulator, LysR family n=5 Tax=G... 52 2e-05 UniRef50_Q3BNH3 Transcriptional regulator, LysR family n=11 Tax=... 52 2e-05 UniRef50_A1WA39 Transcriptional regulator, LysR family n=10 Tax=... 52 2e-05 UniRef50_A3Y684 Transcriptional Regulator, LysR family protein n... 52 2e-05 UniRef50_B7I7G7 Transcriptional regulator, LysR family n=42 Tax=... 52 2e-05 UniRef50_Q8E8W2 Transcriptional regulator, LysR family n=1 Tax=S... 52 2e-05 UniRef50_Q15X65 Transcriptional regulator, LysR family n=1 Tax=P... 52 2e-05 UniRef50_B4UKP3 Transcriptional regulator, LysR family n=4 Tax=A... 52 2e-05 UniRef50_Q1DCG4 Transcriptional regulator, LysR family n=2 Tax=C... 52 2e-05 UniRef50_B0KGK4 Transcriptional regulator, LysR family n=3 Tax=P... 52 2e-05 UniRef50_B2T4N3 Transcriptional regulator, LysR family n=6 Tax=B... 52 2e-05 UniRef50_B5ZNX7 Transcriptional regulator, LysR family n=4 Tax=R... 52 2e-05 UniRef50_A8FU12 Transcriptional regulator n=2 Tax=Gammaproteobac... 52 2e-05 UniRef50_A0KQ86 Regulatory protein, LysR:LysR, substrate-binding... 52 2e-05 UniRef50_B9JNL4 Transcriptional regulator protein n=1 Tax=Agroba... 52 3e-05 UniRef50_C9P538 Transcriptional regulator n=1 Tax=Vibrio metschn... 52 3e-05 UniRef50_C6B6V3 Transcriptional regulator, LysR family n=3 Tax=R... 52 3e-05 UniRef50_A1B0X3 Transcriptional regulator, LysR family n=11 Tax=... 52 3e-05 UniRef50_B1G6L3 Transcriptional regulator, LysR family n=1 Tax=B... 52 3e-05 UniRef50_A1U1I0 Transcriptional regulator, LysR family n=67 Tax=... 52 3e-05 UniRef50_A8TTL8 Transcriptional Regulator, LysR family protein n... 52 3e-05 UniRef50_B8CHE2 Regulatory protein, LysR:LysR, substrate-binding... 52 3e-05 UniRef50_B1KL88 Transcriptional regulator, LysR family n=3 Tax=S... 52 3e-05 UniRef50_Q11LB7 Transcriptional regulator, LysR family n=1 Tax=C... 52 3e-05 UniRef50_Q0K5L3 Transcriptional regulator, LysR-family n=5 Tax=B... 52 3e-05 UniRef50_A8KXK4 Transcriptional regulator, LysR family n=4 Tax=A... 52 3e-05 UniRef50_D0GM10 Transcriptional regulator, LysR family n=1 Tax=L... 52 3e-05 UniRef50_C0N5A5 LysR substrate binding domain protein n=1 Tax=Me... 52 3e-05 UniRef50_UPI0001BC7B6D transcriptional regulator, LysR family pr... 52 4e-05 UniRef50_B4EMI8 LysR family regulatory protein n=16 Tax=Burkhold... 52 4e-05 UniRef50_Q72A86 Transcriptional regulator, LysR family n=3 Tax=D... 51 4e-05 UniRef50_Q5P2Q3 Transcription regulator protein, lysR family n=1... 51 4e-05 UniRef50_B8H5P5 Transcriptional regulator, LysR family protein n... 51 4e-05 UniRef50_B8IGL0 Transcriptional regulator, LysR family n=1 Tax=M... 51 4e-05 UniRef50_A1WQD6 Transcriptional regulator, LysR family n=12 Tax=... 51 4e-05 UniRef50_A8I530 Transcriptional regulator n=1 Tax=Azorhizobium c... 51 4e-05 UniRef50_Q13LU0 Transcriptional regulator, LysR family n=1 Tax=B... 51 4e-05 UniRef50_Q1QYB4 Transcriptional regulator, LysR family n=4 Tax=G... 51 4e-05 UniRef50_Q13GK2 Transcriptional regulator, LysR family n=1 Tax=B... 51 4e-05 UniRef50_C5BJL7 Putative HTH-type transcriptional regulator YcjZ... 51 4e-05 UniRef50_A9I5L1 Transcriptional regulator, LysR-family n=3 Tax=P... 51 4e-05 UniRef50_A5GCN9 Transcriptional regulator, LysR family n=2 Tax=G... 51 4e-05 UniRef50_Q7CZE6 Transcriptional regulator, LysR family n=1 Tax=A... 51 4e-05 UniRef50_Q5WH17 LysR family transcriptional regulator n=1 Tax=Ba... 51 4e-05 UniRef50_A0B3J6 Transcriptional regulator, LysR family n=33 Tax=... 51 4e-05 UniRef50_UPI000178A79D transcriptional regulator, LysR family n=... 51 5e-05 UniRef50_A9BYU9 Transcriptional regulator, LysR family n=22 Tax=... 51 5e-05 UniRef50_C2CVZ4 LysR family transcriptional regulator (Fragment)... 51 5e-05 UniRef50_C0ZI27 Transcriptional regulator n=1 Tax=Brevibacillus ... 51 5e-05 UniRef50_Q2T3A1 Transcriptional regulator, LysR family n=12 Tax=... 51 5e-05 UniRef50_B8IHA3 Transcriptional regulator, LysR family n=2 Tax=M... 51 5e-05 UniRef50_Q2RXK6 Transcriptional regulator, LysR family n=2 Tax=A... 51 5e-05 UniRef50_D1XET8 Transcriptional regulator, LysR family n=1 Tax=S... 51 5e-05 UniRef50_A3UKM0 Probable transcriptional regulator n=1 Tax=Ocean... 51 5e-05 UniRef50_A1WKP4 Transcriptional regulator, LysR family n=1 Tax=V... 51 6e-05 UniRef50_C6BG32 Transcriptional regulator, LysR family n=1 Tax=R... 51 6e-05 UniRef50_Q71X77 Transcriptional regulator, LysR family n=18 Tax=... 51 6e-05 UniRef50_Q2BQI7 Hypothetical D-serine deaminase activator n=1 Ta... 51 6e-05 UniRef50_B2TBR7 Transcriptional regulator, LysR family n=1 Tax=B... 50 6e-05 UniRef50_Q74DP8 Transcriptional regulator, LysR family n=1 Tax=G... 50 7e-05 UniRef50_D1TCI7 LysR family transcriptional regulator n=2 Tax=Bu... 50 7e-05 UniRef50_A9AQ57 LysR family transcriptional regulator n=51 Tax=B... 50 7e-05 UniRef50_D0J1E9 Transcriptional regulator, LysR family n=1 Tax=C... 50 7e-05 UniRef50_B2Q0Q6 Putative uncharacterized protein n=1 Tax=Provide... 50 7e-05 UniRef50_A6VUY4 Transcriptional regulator, LysR family n=2 Tax=M... 50 7e-05 UniRef50_A1UZB2 Transcriptional regulator, LysR family n=39 Tax=... 50 7e-05 UniRef50_B9Z6G4 Transcriptional regulator, LysR family n=1 Tax=L... 50 7e-05 UniRef50_B2K791 Transcriptional regulator, LysR family n=24 Tax=... 50 7e-05 UniRef50_Q0JZC7 Transcriptional regulator, LysR-family n=4 Tax=B... 50 8e-05 UniRef50_C5CZ98 Transcriptional regulator, LysR family n=6 Tax=P... 50 8e-05 UniRef50_B0T7G9 Transcriptional regulator, LysR family n=2 Tax=C... 50 8e-05 UniRef50_A3YG20 Transcriptional regulator, LysR-family protein n... 50 9e-05 UniRef50_Q0B9D7 Transcriptional regulator, LysR family n=19 Tax=... 50 9e-05 UniRef50_C8W9Q2 Transcriptional regulator, LysR family n=2 Tax=A... 50 9e-05 UniRef50_B7V4S2 Probable transcriptional regulator n=7 Tax=Pseud... 50 9e-05 UniRef50_D1VDU1 Transcriptional regulator, LysR family n=2 Tax=A... 50 1e-04 UniRef50_Q28S71 Transcriptional regulator, LysR family n=1 Tax=J... 50 1e-04 UniRef50_A9D6M6 Transcriptional regulator, LysR family protein n... 50 1e-04 UniRef50_D1XMU9 Transcriptional regulator, LysR family n=1 Tax=S... 50 1e-04 UniRef50_B4RB31 Transcriptional regulator, LysR family n=1 Tax=P... 50 1e-04 UniRef50_UPI0001C36FDC transcriptional regulator, LysR family pr... 50 1e-04 UniRef50_A4F9I6 Similar to transcriptional regulator (LysR famil... 50 1e-04 UniRef50_A0LD88 Transcriptional regulator, LysR family n=1 Tax=M... 50 1e-04 UniRef50_Q28K92 Transcriptional regulator, LysR family n=2 Tax=R... 50 1e-04 UniRef50_Q30Z73 Transcriptional regulator, LysR family n=3 Tax=D... 50 1e-04 UniRef50_Q0A4N3 Transcriptional regulator, LysR family n=3 Tax=E... 50 1e-04 UniRef50_B9M6N2 Transcriptional regulator, LysR family n=1 Tax=G... 50 1e-04 UniRef50_D0J2M8 Transcriptional regulator, LysR family n=2 Tax=C... 50 1e-04 UniRef50_A6CYZ8 Hypothetical transcriptional regulator, LysR fam... 50 1e-04 >UniRef50_A7FF10 Chromosome initiation inhibitor n=169 Tax=Gammaproteobacteria RepID=ICIA_YERP3 Length = 302 Score = 556 bits (1432), Expect = e-157, Method: Compositional matrix adjust. Identities = 273/297 (91%), Positives = 281/297 (94%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLEN+FGQPLLVRTVPPRPT Sbjct: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENLFGQPLLVRTVPPRPT 60 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 EQGQKLLALL QVELLEEEWLG++ TPLLLSLAVNADSLATWLLPAL PVLAD PIR Sbjct: 61 EQGQKLLALLHQVELLEEEWLGNDNGVDTPLLLSLAVNADSLATWLLPALKPVLADLPIR 120 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 LNLQVEDETRTQERLRRGEVVGAVSIQ Q LPSCLVD+LGALDYLFV+SK FAE+YFPNG Sbjct: 121 LNLQVEDETRTQERLRRGEVVGAVSIQPQPLPSCLVDQLGALDYLFVASKAFAERYFPNG 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 VTRSALLKAP VAFDHLDDMHQAFLQQNFDL PGSVPCHIVNSSEAFVQLARQGTTCCMI Sbjct: 181 VTRSALLKAPAVAFDHLDDMHQAFLQQNFDLSPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 PHLQIEKELASGELIDLTPGL QRRML+WHRFAPESR MRKVTDALL YG +VLRQD Sbjct: 241 PHLQIEKELASGELIDLTPGLLQRRMLFWHRFAPESRTMRKVTDALLSYGRQVLRQD 297 >UniRef50_P70773 Chromosome initiation inhibitor n=6 Tax=Gammaproteobacteria RepID=ICIA_AERSA Length = 299 Score = 296 bits (758), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 154/297 (51%), Positives = 200/297 (67%), Gaps = 2/297 (0%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 MK DY+ L ALDAV++E+ FERAAQ+L ITQSA+SQRIKQLE F +PLL+R+ P + T Sbjct: 1 MKALDYKLLLALDAVMQEQNFERAAQRLHITQSAISQRIKQLEQQFAEPLLIRSQPLQAT 60 Query: 61 EQGQKLLALLRQVELLEEEWLGD--EQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 GQKLLA RQV LE E G+ P+ +S+AVNADSLATW LPALAP+L P Sbjct: 61 PLGQKLLAHYRQVRQLELELAGEIAPDEPQAPIRVSIAVNADSLATWFLPALAPLLEQHP 120 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 I LNL V+DE RT +R+R G+ GAVS+ Q L C VD+LG + YL +S F ++FP Sbjct: 121 IELNLLVDDECRTLDRVREGQAFGAVSLHGQPLAGCCVDELGEMRYLLTASPAFVARHFP 180 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 G+T +AL K P VAFD DDMH +F+ ++F L PG PCH V SSEAFV +A QG C Sbjct: 181 AGLTPAALAKTPAVAFDQRDDMHVSFMARHFGLEPGGYPCHTVRSSEAFVAMAEQGLAYC 240 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 +IP LQI ++LA G L+DL+P LYWHR+ E + ++++ L+ G + L+ Sbjct: 241 LIPELQIRQQLAQGILLDLSPSHHLIEPLYWHRWVLERGLHKQISQRLISEGRRALQ 297 >UniRef50_Q7MHL5 Chromosome initiation inhibitor n=55 Tax=Vibrionaceae RepID=ICIA_VIBVY Length = 298 Score = 283 bits (724), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 139/292 (47%), Positives = 196/292 (67%), Gaps = 2/292 (0%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 M+ DY+ ++ALDAV+ + GFERAA++L I+QSAVSQRIKQLE Q +L+R PP+PT Sbjct: 1 MRGLDYKWIEALDAVVAQGGFERAAEELYISQSAVSQRIKQLERFLAQSVLIREQPPKPT 60 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGST--PLLLSLAVNADSLATWLLPALAPVLADSP 118 G+KLL L R+V +LE E + + T P+ L+LA NADSLATWLLPAL V+ Sbjct: 61 PVGKKLLGLYRRVRILEHELIPELMNDDTAKPIQLALATNADSLATWLLPALKEVMTQRQ 120 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 + LNL + E+R+ E+L+ GEV GA+S++ Q + C D LG +DY+ V+S F ++YF Sbjct: 121 VELNLAIYGESRSIEKLKSGEVAGAISLESQPIAGCKADYLGRMDYVCVASPDFYQRYFA 180 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 GV L KAP V++D DD+H FL +F++ S+ H V SSEAFV+LA G C Sbjct: 181 AGVNYQTLRKAPAVSYDQYDDLHNRFLHDHFNISRDSIINHNVGSSEAFVRLAVSGIAYC 240 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG 290 +IP LQIE+ELASG L+D+TPG +YWH + ES ++++++ A++ Y Sbjct: 241 LIPKLQIEQELASGVLMDITPGFLLSYRIYWHHWQLESGVLKEISQAIVQYA 292 >UniRef50_Q0I356 Chromosome initiation inhibitor n=6 Tax=Gammaproteobacteria RepID=Q0I356_HAES1 Length = 295 Score = 270 bits (691), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 132/288 (45%), Positives = 189/288 (65%), Gaps = 3/288 (1%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 M R DY ++ +D +I+E G +AA KL I+QSAVSQRIK E G+ +L+RTVPPRPT Sbjct: 1 MIRVDYEAIRLIDLIIKEGGVGKAATKLDISQSAVSQRIKVFERSLGELVLMRTVPPRPT 60 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 GQKLL LL V L+E + LG + + + +++N DSLA W L + L + I+ Sbjct: 61 ALGQKLLTLLHHVSLIEHDLLGKK---GEIIEIPISINMDSLAIWFLSVIKDFLENPLIK 117 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 N+ V++E +T L GEVVGA+S Q + + D +G+LDY+ +S FA++YFP G Sbjct: 118 FNINVDNENKTLNSLLNGEVVGAISSQSKPIIGGKCDYIGSLDYVLAASPAFAQRYFPRG 177 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 VT+ ALLKAP+++F+ +D HQ FLQQ F + G++ H+V SSEA+VQL + CCMI Sbjct: 178 VTKEALLKAPIISFNKNEDSHQIFLQQFFGIAEGNLLSHVVPSSEAYVQLVLENVACCMI 237 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLD 288 P QI ELA+ +I+L P L QR+ LYWHR+ +S +M ++T+A+L Sbjct: 238 PKQQIALELANNRIINLVPELLQRKKLYWHRYELKSTIMDRLTEAILS 285 >UniRef50_Q47WN2 Chromosome initiation inhibitor n=2 Tax=Alteromonadales RepID=Q47WN2_COLP3 Length = 298 Score = 253 bits (647), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 132/296 (44%), Positives = 187/296 (63%), Gaps = 2/296 (0%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 M DY+ L AL VI + FE AAQKL I+QSA+SQRIK LE GQP+L+R P T Sbjct: 1 MANFDYKLLAALAEVIELQSFELAAQKLFISQSAISQRIKALEEHVGQPVLIRNQPIVAT 60 Query: 61 EQGQKLLALLRQVELLEEEW--LGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 G++LL+ ++V+ LE E L P+ +SLAVNADS+ATW + A+ PVL + Sbjct: 61 PAGEQLLSHFKKVKQLEHELVPLLSPDQPIKPMKISLAVNADSIATWFIDAITPVLKNHL 120 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 + LNL +E E RT ++LR G+ +GAVS + L KLG ++Y V+SK FA+KYFP Sbjct: 121 VELNLIIEHEERTLDKLRSGQAIGAVSTIEKPLKGYRSFKLGEMEYCLVASKAFAKKYFP 180 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 GV +++L AP +++DH DDMH ++ ++F+L CH V SSEAF+ LA+QG C Sbjct: 181 EGVNQNSLKMAPAISYDHKDDMHVRYIARHFNLAASEYYCHSVRSSEAFIPLAKQGVAYC 240 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 +IP LQIE+EL +G+LI L PG LYWH + + +K+++ ++ G + L Sbjct: 241 LIPKLQIEQELIAGQLISLCPGKELVETLYWHSWVLVKGVNKKISEQIVSIGREKL 296 >UniRef50_C4KCF0 Transcriptional regulator, ArgP, LysR family n=1 Tax=Thauera sp. MZ1T RepID=C4KCF0_THASP Length = 303 Score = 221 bits (562), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 127/293 (43%), Positives = 177/293 (60%), Gaps = 6/293 (2%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 D+R L A +AV++E GFERAA++L +TQSAVSQR+K LE GQ LLVR+ P RPT G+ Sbjct: 3 DHRLL-AFEAVLQEGGFERAARRLALTQSAVSQRVKLLEAELGQVLLVRSKPVRPTPAGR 61 Query: 65 KLLALLRQVELLEEEW---LGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 +LL L Q+ L+E E L + PL L++ VNADSLATW + A+A V+ D I L Sbjct: 62 RLLPYLAQLRLMEAEARRALSPREV-DGPLRLAVGVNADSLATWFIGAVAEVVRDEGIVL 120 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 + V+D+ T L GEV+G VS + + C +LGA+ YL S F ++FP G+ Sbjct: 121 DCVVDDQDHTHALLADGEVLGCVSTRADPMRGCAAVRLGAMPYLCAGSPDFRARWFPQGL 180 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 T +AL +AP + F H DDMH+AFL ++F L P H+V SSE F+ A G +P Sbjct: 181 TPAALARAPAIVFGHHDDMHEAFLLRHFGLDSRRYPHHVVPSSEGFMAFALAGLGYGFVP 240 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 +Q LA GEL+DL P + +LYWH + +S +M ++ A+ D + L Sbjct: 241 EIQARAHLARGELVDLAPER-EEVVLYWHHWQVQSPVMARLAQAIGDAAGRAL 292 >UniRef50_Q2BJ31 Chromosome replication initiation inhibitor protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJ31_9GAMM Length = 297 Score = 213 bits (542), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 117/293 (39%), Positives = 176/293 (60%), Gaps = 4/293 (1%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 DY+ LQAL A++ E F+RAA +L I+QSAVSQR+KQLE+ GQ L++R P + T GQ Sbjct: 3 DYKQLQALAAILEEDSFDRAADRLHISQSAVSQRLKQLEDSIGQTLIIRGNPLQATPAGQ 62 Query: 65 KLLALLRQVELLEEEWLGDE---QTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 +LL RQV LL++E L +E + +++ +NADSLATW L A+ P+L + I L Sbjct: 63 QLLKHFRQVSLLQDE-LHEELSLKQADGYTQIAIGLNADSLATWFLDAVQPLLNEEKILL 121 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 L+V+D+ +T L+ G+V+G +S + + C LG + Y ++S + KYFP+GV Sbjct: 122 ELKVDDQDQTHHLLKSGQVIGCISSNPKPMQGCNCIPLGIMAYRCLASPCYLAKYFPDGV 181 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 APV F + D++ +L++ F + P P H + S+E+F QL +G C MIP Sbjct: 182 NSEGFRHAPVAEFSNKDELQNRYLEKFFKIGPNEYPKHRIPSTESFFQLIIRGLACGMIP 241 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 Q + LA+G +IDLTPG + LYWH ++ +S + K+T L +VL Sbjct: 242 DQQSHELLANGTVIDLTPGKYLEIPLYWHIWSLKSDLYDKLTRKLTKQAWQVL 294 >UniRef50_Q7NUX8 Inhibitor of chromosome initiation IciA n=2 Tax=Chromobacterium group RepID=Q7NUX8_CHRVO Length = 312 Score = 208 bits (530), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 123/298 (41%), Positives = 180/298 (60%), Gaps = 8/298 (2%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 D R LQ L AV GF++AA+KL +TQSAVSQRI+QLE GQP+L RT P TE G+ Sbjct: 3 DPRQLQTLAAVAETGGFDKAAKKLFLTQSAVSQRIRQLEEQLGQPVLTRTSPAEATEAGR 62 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTP-----LLLSLAVNADSLATWLLPALAPVLADSPI 119 +LL +Q+ L+E + L ++ P L++ VNADSLATW L A+ PVL + Sbjct: 63 QLLRHYQQLLLMENQLL--QKLSPAPRQREFTTLAVGVNADSLATWYLQAVTPVLEAHDL 120 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 L++ V+D+ T E +R G V+G VS + + + + LGA+ YL +++ FA ++FP+ Sbjct: 121 LLDVVVDDQDHTHELMRTGHVMGCVSTRPVPIQTGVQHYLGAMRYLCLATPRFAARHFPD 180 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 GV +AL +AP + F D +H FL+Q G P V S++ FV+L RQG + Sbjct: 181 GVDHAALARAPSIIFSRKDAVHGQFLRQAIGY-EGGFPSFTVPSAQGFVELTRQGVAYSL 239 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 +P L ++ +L G L+DL PG + LYWH + ES + + +T+A+LDY + LRQD Sbjct: 240 LPELMLDGDLEDGRLVDLFPGQYMDLPLYWHHWRVESELSQALTEAMLDYCGRHLRQD 297 >UniRef50_C1D4J6 IciA n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D4J6_LARHH Length = 297 Score = 205 bits (521), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 121/295 (41%), Positives = 169/295 (57%), Gaps = 6/295 (2%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 DY+ L AL+AV++ F++AA LCIT SAVSQRI+QLE GQ LL+R++P R T G Sbjct: 3 DYKLLTALEAVVKAGSFDKAAALLCITPSAVSQRIRQLEERTGQLLLIRSLPVRATAAGH 62 Query: 65 KLLALLRQVELLEE----EWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 +LL +RQV LLEE E G+ + G TPL + VNADSL TWLLPA+A V+ Sbjct: 63 RLLRHVRQVALLEEDLQQELQGEAEGGLTPL--PVGVNADSLGTWLLPAVAKVVWRERFV 120 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L V+DE T + LR GEVVG V+ Q C+ LG + Y F ++ F + P+G Sbjct: 121 LQAIVDDEAHTHDLLRSGEVVGCVTSHPQPPTGCISQPLGQMRYRFYATPDFVRNHLPDG 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 +TR A+L P +AF+ D +H ++ F L G P + S+ A + + G + Sbjct: 181 LTREAVLATPGIAFNRKDSLHFGQMEARFGLRLGDYPYLTMPSTHALFEAVKAGLGYGLS 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 P LQ+ + LASGE+IDL P L+WH +A +S + + T L+ + LR Sbjct: 241 PELQVGEALASGEVIDLLPDDPPSVSLFWHGWALQSPRLARFTATLVAEARQRLR 295 >UniRef50_D1U749 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U749_9DELT Length = 309 Score = 203 bits (516), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 114/295 (38%), Positives = 166/295 (56%), Gaps = 5/295 (1%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 DY+ ++AL V+ E GFE+A + L +TQSAVSQRI+ LE + G LLVR PPRPT+ G+ Sbjct: 3 DYKLVEALAVVVAEGGFEKAGRVLGLTQSAVSQRIRLLEELAGCVLLVRASPPRPTDAGR 62 Query: 65 KLLALLRQVELLEEEW---LGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 +L L RQV LEE LG E +G L ++ +NADSLATW P + L P+ L Sbjct: 63 GMLTLYRQVHHLEEGLSARLGLESSGFATL--AVGINADSLATWFFPVVDGFLDSEPVLL 120 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +L+V+D+ +T LR GEV+G +S + + + C V LG + Y + + ++F +GV Sbjct: 121 DLRVDDQAQTHALLRNGEVLGCISDRAEPMQGCSVHVLGEMHYRLYGTPAYQSRWFASGV 180 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 TR + +AP++ F+ D MH A L Q P + SSE F G C M+P Sbjct: 181 TREGVERAPMLIFNRKDVMHAALLAQALGSEPSGYTPFYLPSSEQFAPAIGSGRVCGMLP 240 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 Q + GEL+DL PG L+WH + E+ ++ + T AL+ +VL + Sbjct: 241 DEQAHGPVGRGELVDLLPGHAFTVSLHWHCWNLETSVLTRFTRALVAGARRVLAE 295 >UniRef50_C6BY65 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BY65_DESAD Length = 294 Score = 202 bits (514), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 113/291 (38%), Positives = 169/291 (58%), Gaps = 12/291 (4%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLA 68 L+AL AVI E GF++AA KL I+QSAVSQRI+ E G+ L+VR PP PTE G+KL+ Sbjct: 7 LEALAAVIEEGGFDKAALKLNISQSAVSQRIRNFEEQLGRVLVVRATPPEPTEDGRKLIK 66 Query: 69 LLRQVELLEEEWLGDEQTGSTP----LLLSLAVNADSLATWLLPALAPVLADSPIRLNLQ 124 L + L+E + ++ G P + L + VNADSLATW L AL L + + L+L Sbjct: 67 HLHTIRLMEHDL--NDSMGLNPSGEFVTLPVGVNADSLATWFLDALDGFLKEHNVLLDLY 124 Query: 125 VEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRS 184 V+DE RT E L RGEVVG + + + C D L DYL +S+ F +++F +G R Sbjct: 125 VDDENRTHEMLARGEVVGCIGTVSKPVKGCRSDYLATFDYLCLSTPDFYKRWFKDGFNRE 184 Query: 185 ALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQ 244 ++ KAP F+ D+ L++ F + P + S+E+FV + + M+P Q Sbjct: 185 SVAKAPAAVFNRKDETQSQMLEKLFPGDSVAHPIFYIPSTESFVDIICRELAYGMVPEFQ 244 Query: 245 IEKELASGELIDLTPGLFQRRM---LYWHRFAPESRMMRKVTDALLDYGHK 292 +E+EL SG+LI++ P Q R+ LYWH + E++++ + L+ Y +K Sbjct: 245 VEEELKSGQLIEVAP---QGRVPVSLYWHSWNVETKLLEGLRRELVGYFNK 292 >UniRef50_Q30VM9 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30VM9_DESDG Length = 316 Score = 201 bits (511), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 123/314 (39%), Positives = 175/314 (55%), Gaps = 23/314 (7%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 +YR ++AL V+RE GFE+AA+ L +TQSAVSQRI+QLE G L+ R P PTE G+ Sbjct: 3 EYRLIEALAMVVREGGFEKAARVLHVTQSAVSQRIRQLEAAAGTALVTRAAPVTPTEAGR 62 Query: 65 KLLALLRQVELLE------------EEWLGDEQT--GSTPLL--LSLAVNADSLATWLLP 108 +LL QV +LE E LG+ G P LS+AVNADSLATW L Sbjct: 63 RLLRHYHQVSMLEADLERDMAARFSAELLGEGGAAHGRAPAYRQLSVAVNADSLATWFLE 122 Query: 109 ALAPVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVS 168 A+ V + L++ V+D+ RT + LR GEVVG VS + C + +LG+++YL + Sbjct: 123 AVDAVAEQEKLLLDVLVDDQDRTHDLLRNGEVVGCVSTRATPFHGCSMQRLGSMEYLVCA 182 Query: 169 SKPFAEKYF------PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGS-VPCHIV 221 + FA ++ T + LL+AP V ++ +D +H LQ + + P + P H V Sbjct: 183 APDFAAEHGLRVGADGRAATAADLLRAPAVLYNRVDGVHDTMLQTLYGIAPDTPYPRHYV 242 Query: 222 NSSEAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRK 281 SSEAFV++ G +PHLQ E LA GEL+DL PG L+WH + + + ++ Sbjct: 243 PSSEAFVKMVAAGFGWGCVPHLQAEPLLAGGELVDLAPGWALPVALHWHWWDLGTGLFKR 302 Query: 282 VTDALLDYGHKVLR 295 + L D+ VLR Sbjct: 303 MAAVLSDHAALVLR 316 >UniRef50_B8FDR1 Transcriptional regulator, ArgP, LysR family n=2 Tax=Desulfobacteraceae RepID=B8FDR1_DESAA Length = 298 Score = 201 bits (510), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 113/294 (38%), Positives = 169/294 (57%), Gaps = 2/294 (0%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 DY+ L+AL AV++E GFE+AA +L ITQSAVSQR+K LE+ GQ L+VRT PPR T G+ Sbjct: 3 DYKLLEALAAVVQEGGFEKAAARLHITQSAVSQRVKLLEDQAGQVLMVRTSPPRATPAGR 62 Query: 65 KLLALLRQVELLEEEWLGD-EQTGSTPLL-LSLAVNADSLATWLLPALAPVLADSPIRLN 122 +++ QV LEE+ + TG L+L +N DSL+TW LPA+ L + L+ Sbjct: 63 QMIKHYLQVNRLEEDLKESLDLTGQDVFTTLALGINGDSLSTWFLPAVRDFLIRERLLLD 122 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 L+ +D+ T + LR GEV+G +S+Q + + CL++ LG +DY ++S +A K+FP G+ Sbjct: 123 LRGDDQDETHKMLRDGEVIGCISVQDRPMQGCLMEYLGRMDYRLIASPEYAAKWFPEGMN 182 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 + KAP F+ D +H P +P H + SSE FV G M+P Sbjct: 183 LESASKAPFFIFNRKDHLHYKMFPLALGEVPTPLPAHYLPSSEQFVSFIEAGLGYGMLPD 242 Query: 243 LQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 Q ++ L +G L+DL P LYWH + S ++ + T L+ ++L+Q Sbjct: 243 QQSKELLEAGLLVDLAPSHIVPVHLYWHCWNLSSALLERFTRHLVRKARRILQQ 296 >UniRef50_B8DQE7 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DQE7_DESVM Length = 320 Score = 197 bits (501), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 130/321 (40%), Positives = 179/321 (55%), Gaps = 31/321 (9%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 DYR ++A+ VIRE GFERAA+ L +TQSAVSQR+K LE+ G L+VR P R T++G+ Sbjct: 3 DYRLVEAVATVIREGGFERAARVLHLTQSAVSQRVKALEDQLGTVLVVRATPVRATDEGR 62 Query: 65 KLLALLRQVELLEEEWLG---------------DEQTGSTPLL----LSLAVNADSLATW 105 +LLA +V LLE + D P + L +AVNADSLATW Sbjct: 63 RLLAHCDKVGLLETDLAAALRPEGGAGGASGSPDSDGPEIPRIPWTTLPVAVNADSLATW 122 Query: 106 LLPALAPVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYL 165 A+AP L L+L V+D+ RT LR G V AVS + A+ C LG +DYL Sbjct: 123 FPDAVAPFLRAERALLDLSVDDQERTHLLLRDGHVAAAVSTRAAAVQGCRCLPLGRVDYL 182 Query: 166 FVSSKPFAEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPG---------SV 216 +++ FA ++FP G+T +AL +AP V F+ D++H FL+ LPPG S+ Sbjct: 183 CLAAPHFAAQWFPAGLTEAALCRAPAVIFNRADEVHHQFLR---GLPPGATSFDRIARSL 239 Query: 217 PCHIVNSSEAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPES 276 P H + SSE FV + QG MIP Q + LA G LIDL PG LYWH + + Sbjct: 240 PLHYIPSSERFVDVVAQGLAYGMIPLPQARQHLADGRLIDLAPGHAVPIRLYWHCWGLRT 299 Query: 277 RMMRKVTDALLDYGHKVLRQD 297 R++ +T ++ + +VL Q+ Sbjct: 300 RLLDALTHHVVSHAQQVLAQE 320 >UniRef50_Q02H78 Chromosome initiation inhibitor n=28 Tax=Gammaproteobacteria RepID=ICIA_PSEAB Length = 300 Score = 195 bits (495), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 117/287 (40%), Positives = 164/287 (57%), Gaps = 7/287 (2%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 DY+ L AL AV+ + GFERAAQ L ++QSAVSQRIK LE GQP+LVR PP PT+ G+ Sbjct: 5 DYKLLAALAAVVEQGGFERAAQALGLSQSAVSQRIKLLEARVGQPVLVRETPPHPTDLGR 64 Query: 65 KLLALLRQVELLE---EEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 +LL ++QV LLE + W+ + G P L +A+NADSLATW A+ A+ + L Sbjct: 65 RLLNHVQQVRLLEGDLQRWVPNLDEGGAPERLRIALNADSLATWWAAAVGDFCAERRVLL 124 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +L VED+ +R+R GEV G V + + LGA+ Y ++S F ++FP GV Sbjct: 125 DLVVEDQEVGLKRMRAGEVAGCVCGSARPVAGARSLLLGAMRYRGLASPDFIARHFPRGV 184 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLP-PGSVPCHIVNSSEAFVQLARQGTTCCMI 240 +AL P + F D + FL+ DL G H+ SSE FV+L G ++ Sbjct: 185 EAAALAGVPAIVFGPDDLLQHRFLK---DLGVEGGFIHHLCPSSEGFVRLTAGGLGWGLV 241 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALL 287 P Q++ ELA GEL++L PG LYWH + ++ +T+ LL Sbjct: 242 PERQVQGELARGELVELLPGQVIDVPLYWHYWRNGGELLASLTEHLL 288 >UniRef50_C7LQL1 Transcriptional regulator, ArgP, LysR family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQL1_DESBD Length = 321 Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 115/287 (40%), Positives = 168/287 (58%), Gaps = 7/287 (2%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 D + LQAL AVI E+ FE+AA+ L +TQSAVSQRI+QLE GQ L+VR+VP RPT G Sbjct: 3 DTKHLQALAAVITEQSFEKAARSLFLTQSAVSQRIRQLEEHVGQMLVVRSVPIRPTSAGM 62 Query: 65 KLLALLRQVELLEEEWLGDEQTG--STPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 +L RQ+ +LEE + G S ++LAVNADSL TW L ++ +LA + L+ Sbjct: 63 AMLRHFRQLSVLEESLFEELAPGENSNIATVTLAVNADSLDTWFLRSIPDILAGENVLLD 122 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 L V+D++ T LR GEV GA++ L LG ++YL V++ F ++ P G T Sbjct: 123 LVVDDQSVTHAYLRSGEVQGAITSTPATFQGLLTHDLGDMEYLCVATPAFRMRHCPQGFT 182 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNF--DLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 R A AP+V F+H D + FL+Q F ++ P P H++ S+ +F L QG MI Sbjct: 183 RQAADNAPIVIFNHKDALQHEFLRQRFGEEITP---PAHVMPSNISFQGLILQGGAYGMI 239 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALL 287 + E L GEL+DLTPG R ++ ++ +S + R++ + ++ Sbjct: 240 SRILAEPHLRQGELVDLTPGETLRVPHFYQCWSLQSSLSRRIAEIIV 286 >UniRef50_A3D5N6 Transcriptional regulator, LysR family n=18 Tax=Shewanella RepID=A3D5N6_SHEB5 Length = 311 Score = 191 bits (486), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 115/298 (38%), Positives = 164/298 (55%), Gaps = 16/298 (5%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 +Y L+AL V+ E GF+RAA+ L ITQSAVSQRI+QLE GQ LL+R+ P T G+ Sbjct: 3 EYANLKALAVVVSEGGFDRAAKVLHITQSAVSQRIRQLEEKVGQSLLIRSNPVVATPTGK 62 Query: 65 KLLALLRQVELLEEEWLG--DEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 +LL QV+LLE E D + P + +AVNADSLATW LPALA + + L Sbjct: 63 RLLRHYSQVQLLESELRAEMDADDPNHPTTVRIAVNADSLATWFLPALAGMFSRHAWLLE 122 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF----- 177 L V+DE+ T L+ GE VG V+ + C + LG ++YL V++ FA +YF Sbjct: 123 LIVDDESYTHHLLKNGEAVGCVTTTEVPMAGCSSEFLGTMEYLCVATPEFAARYFGEPSD 182 Query: 178 ---------PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFV 228 N ++++ L KAP V F D +H+ FL Q F++ PG H + SSE+F+ Sbjct: 183 SKSLSDTQPSNDISQAQLAKAPAVVFSTKDKLHEKFLAQYFNMTPGQWWQHTIPSSESFL 242 Query: 229 QLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDAL 286 + ++ HLQ + + G LI+LTP R L+W + +++ V AL Sbjct: 243 EAINLSLGYGLVGHLQAKPLIDRGILIELTPERRMRVPLFWQHWNIKAKQTTLVYRAL 300 >UniRef50_A3MG84 Chromosome initiation inhibitor n=54 Tax=Proteobacteria RepID=A3MG84_BURM7 Length = 325 Score = 184 bits (466), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 105/293 (35%), Positives = 161/293 (54%), Gaps = 4/293 (1%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 D + AL AV FE+AA +L +T SAV+QR++ LE G PLL+RT P RPT GQ Sbjct: 4 DPKQAAALVAVADTGSFEQAAARLHVTASAVTQRVRALEASLGAPLLLRTRPCRPTADGQ 63 Query: 65 KLLALLRQVELLEEEWLGD--EQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 ++L LR++ LL+ + + + GST + +++A+N+DSL +W LPAL VLA + Sbjct: 64 RVLQHLRRMALLQVDLQAELEAERGST-IAVAIALNSDSLGSWFLPALTSVLAGERMLFE 122 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 L VED+ T L G +G V+ Q + + C LG + Y ++++ FA ++F G+T Sbjct: 123 LIVEDQDHTFALLESGMAIGCVTTQSKPMRGCFATPLGTMRYRLIAAEEFAARWFAQGLT 182 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 R + +APVVA D + +FL+ LP G+ PCH V + A R G M+P Sbjct: 183 RESAREAPVVAHGRRDTLQSSFLRDKLGLPDGAFPCHYVPGTHAHFAAVRHGLGYAMVPE 242 Query: 243 LQIEKE-LASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 L + LA L+DL P LYWH + +S M ++ +++ ++L Sbjct: 243 LLLGTTPLAEQRLVDLAPAHSTDVSLYWHAWTVQSPKMESLSSRVVEAAQQLL 295 >UniRef50_A1VG08 Transcriptional regulator, LysR family n=3 Tax=Desulfovibrio vulgaris RepID=A1VG08_DESVV Length = 302 Score = 180 bits (457), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 108/297 (36%), Positives = 165/297 (55%), Gaps = 5/297 (1%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 M DYR ++A+ AV+ E FE+AA +L ITQSAVSQR+K LE+ G+ L+VR P R T Sbjct: 1 MSMYDYRQVEAVAAVVLEGSFEKAAARLHITQSAVSQRVKALEDSLGRMLVVRASPVRAT 60 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTP---LLLSLAVNADSLATWLLPALAPVLADS 117 ++GQ+++ +V LE + LG P L +A+NADSLATW L A+ P+L Sbjct: 61 DEGQRIVEHYLKVGQLEAD-LGASLVTDRPAAWTTLPVAINADSLATWFLDAVGPLLRRE 119 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 + L++ ED+ T LR G V ++ + + LG + L +++ FA ++F Sbjct: 120 RVLLDIVTEDQEHTYRLLREGRVAACITTRADPVQGWRSLALGDMPSLCLATPEFAARWF 179 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 G+T +A+ +AP V ++ D +H FL F+ P H V SSE FV + G Sbjct: 180 SEGLTPAAVREAPAVLYNRKDSLHHRFLSDLFE-EEVDFPAHYVPSSERFVDVLAGGFAY 238 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 ++P LQ E+ LA G L DL PG LYWH ++ +R + ++T+ ++ + VL Sbjct: 239 GIVPALQAERHLADGVLCDLAPGRAVSVHLYWHCWSLTTRFVEELTENVVSHARAVL 295 >UniRef50_B2SEE8 Chromosome replication initiation inhibitor protein n=7 Tax=Francisella RepID=B2SEE8_FRATM Length = 306 Score = 179 bits (455), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 156/289 (53%), Gaps = 6/289 (2%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 DY+ +QAL VI ++ FE AA KL I+QSAVSQRIK LE FG P+L+R +P + T+ GQ Sbjct: 3 DYKAIQALKEVIEQQSFELAADKLFISQSAVSQRIKSLETKFGAPVLIRILPYKVTKLGQ 62 Query: 65 KLLALLRQV-ELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNL 123 LL+LL +V L + +T L +S+A+N DSL TW L L + + +R N Sbjct: 63 DLLSLLTKVELLESSLLEEKKLIQNTKLQISIAINQDSLDTWFLDVLKVIDTTNLVRFNF 122 Query: 124 QVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTR 183 + D+ T + L++GEV+ +S + C V+KLG ++YL V S F +KYF R Sbjct: 123 KTFDQEMTLKSLQKGEVLSCISTMKKTAHGCYVEKLGEIEYLLVCSPYFHDKYFTKFKRR 182 Query: 184 -----SALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 + L +AP + F+ D ++ F+++ + C+IV S + F Q+ QG Sbjct: 183 NKDWVNTLKQAPSLLFNQYDQLNSRFMEKFYGFQVDIDNCNIVPSVKGFKQMCLQGKGYA 242 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALL 287 ++P I E+ +GELI L L+WH + RK+ L+ Sbjct: 243 LLPKSDIIDEIKNGELIILDDKCIWNMELFWHYWDLPDNNYRKIMTTLI 291 >UniRef50_A6Y5L9 Transcriptional regulator n=2 Tax=Vibrio cholerae RepID=A6Y5L9_VIBCH Length = 299 Score = 177 bits (448), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 105/290 (36%), Positives = 168/290 (57%), Gaps = 8/290 (2%) Query: 11 ALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLALL 70 A AVI E F+RAA++L +T SA+SQRIKQLE+ GQ L+VR P +PT G++LL+ + Sbjct: 10 AFIAVIEEGSFDRAAKRLSVTPSAISQRIKQLEDKMGQLLVVRQFPCKPTPSGEQLLSRV 69 Query: 71 RQVELLEEE----WLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVE 126 +Q+ LLE E L D ++ S+AVN DSL+TWLL ALAP+ + +++V+ Sbjct: 70 QQMALLESEVTADLLPDARSNIHSSTFSIAVNEDSLSTWLLKALAPLCRTYNYQFDIRVD 129 Query: 127 DETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSAL 186 +E T E L+ G V+GA++ + + L C+V +LG + Y+ V++ E+YF +G+ A Sbjct: 130 NEDFTLEYLKNGHVIGALTCEARPLQGCVVHELGKMRYVAVATPALFERYFRHGLNVEAF 189 Query: 187 LKAPVVAFDHLDDMHQAFLQ--QNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQ 244 AP++ +DH D + + F++ ++ P V H + S+ V+ A C+ Sbjct: 190 QNAPMIDYDHKDFLQRRFIRTITGQEVLPRHV--HYLPSATGIVEAALLEMGWCVTLEGF 247 Query: 245 IEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 + +L +G+LIDL P LYW SR++ +T+AL+ +VL Sbjct: 248 LGDKLETGQLIDLAPNTALYAPLYWQHVGIRSRVLSTITNALITESKQVL 297 >UniRef50_Q6FDJ8 Inhibitor of replication initiation (Transcriptional regulator of dnaA and argK (Affects arginine transport) (LysR family)) n=12 Tax=Acinetobacter RepID=Q6FDJ8_ACIAD Length = 297 Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 100/292 (34%), Positives = 160/292 (54%), Gaps = 2/292 (0%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 D + A AV + FE+AA +LCIT SAV+ R++ LE GQ LL+R P T GQ Sbjct: 3 DNKQCDAFFAVAEQGSFEQAAIQLCITASAVTLRVQALEKELGQLLLIRARPCTLTHAGQ 62 Query: 65 KLLALLRQVELLEEEWLGD--EQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 +L L+ LE+ +L + + T S + +A NADSLATWLLPAL V + + L Sbjct: 63 QLFEHLQHTRRLEQNFLHNLTDATPSQFFKVMMAANADSLATWLLPALNEVASQQKLMLE 122 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 + ++D++ T + +G V +SI+ +A+ C LG++ Y ++++ F +F +GV Sbjct: 123 ILLDDQSHTHALMEKGTVSACISIEPKAMKGCKSVYLGSMRYKMLATQAFQGTWFRHGVH 182 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 R AL AP + F+H D MH L++ + L G+ P H + SS F + G ++P Sbjct: 183 REALRVAPAIIFNHKDQMHFDLLEKQYGLIKGAYPYHYIPSSACFFTAVQLGLGYGLVPE 242 Query: 243 LQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 LQ+++ +L D+ P + LYWH + +SR ++ +T+ L + K L Sbjct: 243 LQLKQAADPDQLRDIMPEMQLDIPLYWHHWQQQSRPLQSLTEHLTQHAAKYL 294 >UniRef50_A3Y969 Chromosome replication initiation inhibitor protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y969_9GAMM Length = 292 Score = 173 bits (439), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 97/284 (34%), Positives = 158/284 (55%), Gaps = 2/284 (0%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 DY+ ++ L V+ +GFE+A L +TQSAVSQ+IK+LE + LL+R P R T G+ Sbjct: 2 DYKAIECLRQVVESQGFEKAGDVLGLTQSAVSQKIKRLEQSYNSVLLIRDKPLRLTALGK 61 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPL-LLSLAVNADSLATWLLPALAPVLADSPIRLNL 123 KL +V+L+E+ L E +G L L +A+N DSLATW + ++ D RL Sbjct: 62 KLNMHYIKVQLMEQA-LVSESSGDQSLQCLPIAINNDSLATWFIHVISKFSKDENRRLQC 120 Query: 124 QVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTR 183 ++ D++ T++ L++GEVV A+S ++ LG++DY+ V+S F Y T Sbjct: 121 KIADQSLTRDLLKKGEVVAALSDTGASIAGGESLYLGSMDYILVASPKFIANYLGRRFTA 180 Query: 184 SALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHL 243 + K P + FD D + ++ Q L + CH + SS+ FVQ+ C ++P + Sbjct: 181 LDIAKVPALIFDENDQLWSSYQTQILGLEGNARACHWLPSSQGFVQMLLSDNVCGLVPKI 240 Query: 244 QIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALL 287 QIE+EL G L++L P + L+WH +S ++ ++TD ++ Sbjct: 241 QIEQELKEGRLVELMPKKRLKVPLFWHWCGLDSALISELTDTVV 284 >UniRef50_C3JN11 Transcriptional regulator, LysR family n=2 Tax=Rhodococcus erythropolis RepID=C3JN11_RHOER Length = 297 Score = 173 bits (439), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 108/295 (36%), Positives = 161/295 (54%), Gaps = 6/295 (2%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 D+ L+AL A + E FE AA+KL IT SAVSQRIK LE G+ L+ RT P R T+ G+ Sbjct: 3 DFEQLRALHAAVDEGTFEAAARKLHITPSAVSQRIKGLETSVGRILVQRTKPIRVTDSGR 62 Query: 65 KLLALLRQVELLEEEW---LGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 ++L L RQ++ L + LG E +S+AVNADSL+TW+L ALA + + Sbjct: 63 EVLRLARQIDALSRDTVRELGLENGSGMFARVSIAVNADSLSTWVLGALAEFTQE--VGF 120 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 + ++D+ T E LR G V+ AV+ + C +LG + Y ++S F ++F +GV Sbjct: 121 DFHLDDQDHTTELLRDGSVMAAVTSVASPIQGCTSSRLGIMRYRPMASAEFCRRWFADGV 180 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 T +L +AP+V F+ D + +L Q P P H+V SS F R+G +IP Sbjct: 181 TAESLSEAPLVVFNRKDLLQDRYLDQKVG-HPADPPRHLVPSSADFADAVRRGYGWGLIP 239 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 LQ + SG LI P LYW ++ S ++R++++ + H+VL Q Sbjct: 240 DLQRGDDDRSGVLIGFDPDFVDDVPLYWQQWKLSSPVLRRISEVVTRRAHEVLHQ 294 >UniRef50_C8WDF3 Transcriptional regulator, ArgP, LysR family n=3 Tax=Zymomonas mobilis RepID=C8WDF3_ZYMMN Length = 302 Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 106/286 (37%), Positives = 157/286 (54%), Gaps = 8/286 (2%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 DY L A+ AVI+E FE AA+ L IT SA+SQR++ E G L++R P PT+ G+ Sbjct: 3 DYTALVAVHAVIQEGSFEAAARFLGITPSAISQRVRGYEERLGALLIIRGQPCMPTDIGR 62 Query: 65 KLLALLRQVELLEEEWLGDEQTGST---PLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 L A + +V+LLE E E +GS P+ L +AVNADSLATW A+A + + L Sbjct: 63 ALCAHVEKVQLLEAEI--AELSGSKEALPVHLKIAVNADSLATWFPDAVADFIKQEKVFL 120 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 NL VEDET T ++LR GE + A++ Q + C LG + Y+ ++ F + YFP G Sbjct: 121 NLFVEDETVTADKLRSGEAMAAITAQTAPITGCRTIHLGKMVYIACATPSFIKSYFPEGF 180 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLP-PGSVPCHIVNSSEAFVQLARQGTTCCMI 240 T+ A +AP + F+ D + +LQQN+ +P P + H + S++ F+ G M Sbjct: 181 TKQAFTQAPCICFEKHDGLQSQWLQQNYAMPLPPKI--HYIPSTQGFLNFLLAGAGWGMQ 238 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDAL 286 P ++ ++ G LI+L P LYW +S + K+T L Sbjct: 239 PFPLVKVDIEEGRLIELQPKRAVEVDLYWVVPRLKSDLFEKLTHYL 284 >UniRef50_B1Y350 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=B1Y350_LEPCP Length = 300 Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 110/300 (36%), Positives = 163/300 (54%), Gaps = 11/300 (3%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 D + L+AL AV+RE FERAA+++ +T SAVSQRI+ LE G LLVRT P TE+G Sbjct: 4 DLQALRALAAVLREGSFERAARQMHVTPSAVSQRIRALEERLGCVLLVRTSPVTATEEGA 63 Query: 65 KLLALLRQVELLEEEW------LGDEQT--GSTPLLLSLAVNADSLATWLLPALAPVLAD 116 +L Q+E+LE + LGD + G + + +AVNADSLATW++PALA A Sbjct: 64 RLYLHFLQIEVLEADLARDLQPLGDAASRRGRS---IRVAVNADSLATWVIPALADFHAR 120 Query: 117 SPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY 176 S + L V+D+ T+E LR G V AV+ + + C VD LG++ Y +S FA++Y Sbjct: 121 SGDTVALHVDDQDHTREWLRSGTVFAAVTAASEPVAGCRVDPLGSMRYCAAASPEFAKRY 180 Query: 177 FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 F ++A +AP++ F+ D + FL + P + S+ AF+ AR G Sbjct: 181 FEARDLQAAFSEAPMLVFNQKDQLQHRFLNELLGDADPHPPVWWLPSTHAFLDAARAGLG 240 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 + P + +LASG L+DL+PG L+W + +S + + +L L Q Sbjct: 241 WGLHPLPLVADDLASGRLVDLSPGHSLDVPLFWQSWRLDSETVHTLRSCMLRAAEGALLQ 300 >UniRef50_A4BE26 Chromosome replication initiation inhibitor protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BE26_9GAMM Length = 290 Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 112/295 (37%), Positives = 159/295 (53%), Gaps = 10/295 (3%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 DYR L AL AVI+ +GF+RAAQ L ++QSA+SQRIKQLE GQPL++R PP+ T G Sbjct: 3 DYRALTALAAVIQHQGFDRAAQALHLSQSAISQRIKQLEGRIGQPLILRQSPPQATALGL 62 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQ 124 +L+ L V LE + L + +A+N DSLATW AL + D I ++L Sbjct: 63 RLITHLETVLHLESD-LNLPLETDARIHARIAINHDSLATWFSEALGRITED--IDVDLI 119 Query: 125 VEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPF-AEKYFPNGVTR 183 D+ E ++RGEV+ + + +A+ VD+LG + Y +S+ F + R Sbjct: 120 TADQDAGIELMKRGEVMACLCAEGKAVNGGRVDRLGTMRYRAYASRDFLMRHHLLESFDR 179 Query: 184 SALLKAPVVAFDHLDDMHQAFLQQNFDLPPGS-VPCHIVNSSEAFVQLARQGTTCCMIPH 242 L +AP + F+ D + FLQQ P + V C SSE FVQLA G MIP Sbjct: 180 --LYQAPCLVFNRDDRLQHRFLQQLGQAEPINLVHC---PSSEGFVQLAASGCGFGMIPE 234 Query: 243 LQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 +Q + G LIDL P F LYWH + + M+++ +++ H+ LRQD Sbjct: 235 IQAALSVQVGSLIDLAPETFIDVPLYWHSWRSSGQAMKQLRASVIKTAHRWLRQD 289 >UniRef50_B9JYX8 Transcriptional regulator LysR family n=9 Tax=Alphaproteobacteria RepID=B9JYX8_AGRVS Length = 301 Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 109/293 (37%), Positives = 157/293 (53%), Gaps = 9/293 (3%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 D L AL AV+R FE+AA++L +TQSA+SQRIK LE G L++R P PT G Sbjct: 4 DGEQLSALVAVLRSGSFEKAARQLGVTQSAISQRIKLLEERSGTALIIRGQPCLPTSAGA 63 Query: 65 KLLALLRQVELLEEEWLGDEQTG-STPLLLSLAVNADSLATWLLPALAPVLADSPIRLNL 123 +L +V LLE E +GD + + + LA+NADSLATW +PA+A V + +L Sbjct: 64 RLCRHAEEVALLEREVIGDLGLAQAAQVTVRLAINADSLATWFVPAMAAV---EGLLFDL 120 Query: 124 QVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTR 183 ++D+ + + LRRGEV AV+ + C LG L Y +S F ++FP GVT Sbjct: 121 VLDDQDHSADWLRRGEVRAAVTSLAAPVQGCDCRPLGLLTYRATASPDFVARWFPQGVTA 180 Query: 184 SALLKAPVVAFDHLDDMHQAFLQQ--NFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 AL AP + F+ D + A+++Q L P PCH + SS+AF+ +R G M P Sbjct: 181 EALAVAPCLTFNAKDGLQTAWIEQVAGCRLSP---PCHWLPSSQAFIDASRLGLGWGMNP 237 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 + + +A G L+DL P LYWH R + +T ++L + L Sbjct: 238 AVSVAPLIAEGVLVDLRPDQPLAVPLYWHWSRALGRALDPLTASVLAAARQCL 290 >UniRef50_C1SIA9 Transcriptional regulator, ArgP family n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SIA9_9BACT Length = 293 Score = 166 bits (421), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 98/288 (34%), Positives = 151/288 (52%), Gaps = 8/288 (2%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 DY+ L+A AV+ +GFERA+ L +TQSAVSQR++QLE GQ LLVR+ PP PT+ G+ Sbjct: 3 DYKLLEAFTAVVENKGFERASLVLHLTQSAVSQRVRQLEEAVGQILLVRSNPPVPTDAGK 62 Query: 65 KLLALLRQVELLEEE----WLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 +++ ++VELLE E L E +G T +S+++NADSL TW L A+ + + I Sbjct: 63 NIISHFKKVELLEVELDNSLLHKEVSGFTT--VSVSLNADSLCTWFLDAVEKAVKKNRIL 120 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L L V+D+ T ++ GEV +S + + SC +G + Y S EK+F NG Sbjct: 121 LKLYVDDQDETHRMMKDGEVSACISTRDKPFQSCSCSLIGTMSYKMFCSPEIYEKHFKNG 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + L + PV+ ++ D +H+ F P P + + M+ Sbjct: 181 FDINTLKEVPVIIYNEKDTLHKQMFTNAFKTQPSDFPYMHIPDVNKYKDAIANSFGIGMM 240 Query: 241 PHLQIEKELASGELID-LTPGLFQRRMLYWHRFAPESRMMRKVTDALL 287 +Q + L +G L D P Q LYWHR+ S + +T+++L Sbjct: 241 TVMQCREFLDNGTLRDAFYPHTVQTP-LYWHRWNITSLSLDALTNSIL 287 >UniRef50_Q4UXK0 Transcriptional regulator lysR family n=8 Tax=Xanthomonadaceae RepID=Q4UXK0_XANC8 Length = 305 Score = 166 bits (420), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 104/293 (35%), Positives = 158/293 (53%), Gaps = 9/293 (3%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLA 68 L A AV+ E FE AA++L +T SA+SQRIK LE+ GQ L++RT P R T GQ+LL Sbjct: 8 LAAFAAVLDEGSFELAARRLSVTSSAISQRIKALEDRLGQVLVLRTAPCRATPAGQRLLR 67 Query: 69 LLRQVELLEEE----WLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQ 124 LR +++L+ E +L D G TP LS+AVN DSL TW+L ALA + + ++ Sbjct: 68 RLRPMQVLQAEAMADFLPDAGVGGTPRTLSIAVNDDSLQTWVLSALAELHQAHGLLFDVH 127 Query: 125 VEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRS 184 V+D+ T E LR G V+GAV+ + + L C V LG + Y ++S +YF +G+ + Sbjct: 128 VDDQDHTLELLRAGTVLGAVTAERRPLQGCNVQPLGTMRYHAIASPDVVARYFSSGLDAA 187 Query: 185 ALLKAPVVAFDHLDDMHQAFLQQ--NFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 L +AP++ F+ D + F ++ L P P H + +S FV A +G C+ P Sbjct: 188 GLSRAPMMVFNRKDALQARFARRITRMQLSP---PIHYLPTSTGFVDAAARGLGWCLAPE 244 Query: 243 LQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 + + L+ + P + LYW A S ++++ D+L LR Sbjct: 245 AMVLPAVERKTLLIIDPTRWLDVPLYWQHAAVRSTTLQRLGDSLRTAAAASLR 297 >UniRef50_D0STT3 DnaA/argK transcriptional regulator n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0STT3_ACILW Length = 301 Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 101/291 (34%), Positives = 149/291 (51%), Gaps = 7/291 (2%) Query: 11 ALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLALL 70 A AV + F+ AA++L IT SAV+ R++ LE GQ LLVR P R T+ GQ LL L Sbjct: 9 AFYAVAKTGSFDLAAEQLNITASAVTLRVQSLEKKLGQLLLVRDRPCRVTQSGQTLLHYL 68 Query: 71 RQVELLEEEWLGD-----EQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQV 125 + LLE+ + D +Q G L++A NADSLATWLLP L L I L+ QV Sbjct: 69 QHQRLLEQNLMQDLGGQLQQEGF--YCLNIATNADSLATWLLPTLQAQLIQHKIVLHFQV 126 Query: 126 EDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSA 185 +D+++T L G V +S + +A+ C + +G + Y V++ F+ +FP GV R A Sbjct: 127 DDQSQTHHLLEAGLVNACLSTEAKAMKGCRAELIGQMQYRLVATPDFSRNWFPQGVHRDA 186 Query: 186 LLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQI 245 L AP + F+ D +H F+Q F L P + S+ AF G +P Q Sbjct: 187 LRLAPAIIFNEKDQLHTQFIQHEFGLNLAQYPHFFIPSTHAFFDAIVMGLGYGWLPDYQT 246 Query: 246 EKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 L SG L++L+ + LYWH + +S + + + L + + Q Sbjct: 247 RDLLESGRLLELSSEMRIEVPLYWHHWKEQSPALEILGECLKQHAQTTMNQ 297 >UniRef50_C7RVK7 Transcriptional regulator, LysR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RVK7_9PROT Length = 302 Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 101/275 (36%), Positives = 152/275 (55%), Gaps = 11/275 (4%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 R D L A AV+ E FE AA+KL +T SAVSQRIK LE+ GQ L+ R+ P R T Sbjct: 2 RIDNAQLAAFAAVLGEGSFELAARKLSVTPSAVSQRIKLLEDRLGQVLIQRSTPCRATAA 61 Query: 63 GQKLLALLRQVELLEEEWLGD----EQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 G++LL QV LLE E L + E +G T + + + VNADSL +W + + Sbjct: 62 GRRLLRHAEQVALLESEVLSELGVVEGSGQTNVRIPIVVNADSLDSWFAEVFDALPGVTS 121 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 I L+++ ED+ + LR G V+ VS +A+ C V+ LGA+ YL V+S + ++YF Sbjct: 122 ITLDIRSEDQDHSVALLREGTVMAGVSASAEAIQGCRVEALGAMRYLAVASPAYVDRYFA 181 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSV---PCHIVNSSEAFVQLARQGT 235 GV+ L APV+ F+ D + + F+ + G+V P H S+ +F++ AR+G Sbjct: 182 AGVSADTLNAAPVLMFNKKDALQRLFVAR----LTGTVLQAPTHCAPSTRSFLEAARRGA 237 Query: 236 TCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWH 270 M+P + L +G+L+++ P + LYWH Sbjct: 238 AWGMMPEQIVAAALRNGDLLEMVPDHWLDIPLYWH 272 >UniRef50_Q2T9B3 Transcriptional regulator, LysR family n=54 Tax=Burkholderia RepID=Q2T9B3_BURTA Length = 297 Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 103/276 (37%), Positives = 145/276 (52%), Gaps = 12/276 (4%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 DY L AL VIR FERAA+ L ++ SAVSQR+K LE G L+ R +P T G Sbjct: 3 DYALLDALAEVIRHGSFERAAKALNVSPSAVSQRVKLLEERVGSVLVKRGLPCVATTSGA 62 Query: 65 KLLALLRQVELLEEEWLG------DEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 L +V +LE E G QTG+ P L +AVN DS+ATW + A+ A+S Sbjct: 63 LLCRHTERVRMLEAELSGHMPAFAGAQTGAWPTL-RVAVNDDSVATWFVDAVGSFCAESG 121 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 L+L ++D+ T ER+R G V GAV+ + + C +LG + Y V S F +YF Sbjct: 122 TLLDLVIDDQDYTAERIRDGSVQGAVTALAEPIQGCRSTRLGRMRYHAVCSPAFHARYFG 181 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQ--NFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 NGV R AL +AP V F+ D + F+++ DL P P H + +++ G Sbjct: 182 NGVNRDALRRAPCVMFNPKDSLQARFIRRVTRVDLDP---PKHWIPHVAGYLRACEAGLG 238 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRF 272 M P +E+ +A+GEL+DL+ G LYW + Sbjct: 239 WGMCPERMVERRIAAGELVDLSDGRSIDVELYWQSW 274 >UniRef50_A1TMH4 Transcriptional regulator, LysR family n=9 Tax=cellular organisms RepID=A1TMH4_ACIAC Length = 318 Score = 163 bits (412), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 100/274 (36%), Positives = 150/274 (54%), Gaps = 10/274 (3%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 DY L+AL AV+RE FERAA++L +T SAVSQR+KQLE GQ L+ R P TE G+ Sbjct: 3 DYAGLEALAAVVREGSFERAARRLHVTPSAVSQRVKQLEERAGQVLVQRGTPCTGTEAGR 62 Query: 65 KLLALLRQVELLEEEW------LGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 +L L QV LLE E L + P + LAVN DSL+TW + A+A Sbjct: 63 RLCLHLEQVALLENELRRVHPALVPDAHAPAP-TVKLAVNDDSLSTWFMDAMAAFAEGGN 121 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF- 177 L+++++D+ T +RLR GEV+ AV+ A+ C LG++ Y+ +S F ++F Sbjct: 122 ELLDVRIDDQEHTAQRLREGEVIAAVTATAGAIAGCNTWPLGSMHYVAAASPAFVRRHFG 181 Query: 178 --PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGT 235 GVT+ + +AP++ + D + +LQ+ P H + S++ F++ G Sbjct: 182 PDTGGVTQDTIAQAPMMVYSRNDRLQDQWLQRQGLGSRRHPPRHFLPSNQGFLRSCEMGI 241 Query: 236 TCCMIPHLQIEKELASGELIDLTPGLFQRRMLYW 269 M P + IE++LA G L+++ PG LYW Sbjct: 242 GWGMHPTVLIERQLADGTLVEMLPGTGMDVALYW 275 >UniRef50_Q93JR1 AttR protein n=1 Tax=Rhodococcus fascians RepID=Q93JR1_RHOFA Length = 320 Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 107/297 (36%), Positives = 150/297 (50%), Gaps = 13/297 (4%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 ++ L L A+ FE AA L I+ SAVSQRI LE G LL RT P PT GQ Sbjct: 3 NHDQLATLAAICDSGSFEGAATALHISSSAVSQRITALERASGAALLQRTRPVLPTRNGQ 62 Query: 65 KLLALLRQVELLEEEWLGDEQTGST------PLLLSLAVNADSLATWLLPALAPVLADSP 118 LL L RQ+E+L + + + GST PL SLA+NADS++TW P + + D Sbjct: 63 ALLRLARQIEVLTVDADAELRGGSTTTNTAAPLRFSLAINADSVSTWFQPVMKAIAVDRR 122 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 I L+L +ED+ T LR+G V+ AV+ A P C V+ LGA+ Y + Sbjct: 123 ILLDLHIEDQDHTDALLRQGAVMAAVTTSRTAAPGCTVEPLGAMVYWPACAPSLIRDADS 182 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQ-NFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 +G S L P++ FD DD+ A+L++ P P H + S+ F+ AR G Sbjct: 183 DGCDPSRL---PMLRFDKKDDLQHAYLRKIKAHREP---PIHYLPSNREFLTAARLGLGW 236 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 ++P QI ++LA G L+ L P LYW R+ S + ++T + D H L Sbjct: 237 GVLPEGQIARDLADGTLVHLDPDHNVTIPLYWQRWHLPSETLDRITGWVRDAAHNAL 293 >UniRef50_A2SLN2 Transcriptional regulator, LysR family n=14 Tax=Burkholderiales RepID=A2SLN2_METPP Length = 312 Score = 160 bits (405), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 103/262 (39%), Positives = 146/262 (55%), Gaps = 12/262 (4%) Query: 21 FERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLALLRQVELLEEEW 80 FERAAQ+L ITQSAVSQR++ LE+ GQ L+VR P R TE G+ LL RQ++ + + Sbjct: 21 FERAAQRLSITQSAVSQRLRALESQVGQLLVVRARPLRLTEPGKVLLRFARQLQAMRADV 80 Query: 81 ---LGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS---PIRLNLQVEDETRTQER 134 LG+ L +AVNADSLATW+LPAL ++ L L V+D+ T E Sbjct: 81 ARELGERMQSQAR--LPIAVNADSLATWVLPALDGLVQQGLKDGFGLELIVDDQDFTHEW 138 Query: 135 LRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN----GVTRSALLKAP 190 LR+G+V+G VS QAL C V+ LG + Y+ V+S F + G+ R + P Sbjct: 139 LRQGQVLGCVSTVPQALRGCRVEPLGVMRYIAVASPGFVARELGGDAAAGLHRGNFARVP 198 Query: 191 VVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIEKELA 250 + F+ DD ++ Q F + + V SSEA+V+ A G ++P LQ+ + LA Sbjct: 199 FLVFNRKDDTQTQWVAQAFGVRAPRLEERFVPSSEAYVRAAALGWGIGVVPELQVRERLA 258 Query: 251 SGELIDLTPGLFQRRMLYWHRF 272 GEL+ L P + LYWH++ Sbjct: 259 QGELLCLRPDIGIEVALYWHQW 280 >UniRef50_B4SNX8 Transcriptional regulator, LysR family n=12 Tax=Proteobacteria RepID=B4SNX8_STRM5 Length = 301 Score = 160 bits (405), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 107/302 (35%), Positives = 160/302 (52%), Gaps = 12/302 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 R D+ L+AL AVIRE F+RAAQ L +T SA+SQR+K LE+ G+ L+ R P T + Sbjct: 2 RIDHAQLRALAAVIREGSFDRAAQSLNVTPSAISQRVKALEDRVGRLLVKRGTPATATAE 61 Query: 63 GQKLLALLRQVELLEEE-----WLGDEQ--TGSTPLLLSLAVNADSLATWLLPALAPVLA 115 GQ L+ L Q LLE + L DE S P+ AVN DSL TW A Sbjct: 62 GQVLVQLAEQTALLEHDALHRMGLADEDLPQASIPV----AVNHDSLETWFPQAAFQFAQ 117 Query: 116 DSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEK 175 + L+L+VED+ T E LR+G V+GAV+ + + C + LG++ Y + F E+ Sbjct: 118 STGTTLDLRVEDQDHTVELLRQGTVLGAVTTLDEPVQGCQIHALGSIRYAATCTPEFRER 177 Query: 176 YFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQ-NFDLPPGSVPCHIVNSSEAFVQLARQG 234 +F GVT AL APV+ F+ D+M F ++ D P + P + S+ AFVQ G Sbjct: 178 HFAKGVTAQALATAPVLVFNRKDEMQSRFARRMAGDDLPSTAPTWWIPSTRAFVQANLGG 237 Query: 235 TTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 M P +++ L +G L+ + ++ LYW + + + M +T A+L+ ++ Sbjct: 238 MGWTMNPLPLVKRHLDAGRLVYVRQRAWEDVPLYWQHWKGDVQTMALLTRAVLEASSALV 297 Query: 295 RQ 296 R+ Sbjct: 298 RR 299 >UniRef50_B8H9B0 Transcriptional regulator, ArgP, LysR family n=5 Tax=Actinomycetales RepID=B8H9B0_ARTCA Length = 315 Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 157/289 (54%), Gaps = 7/289 (2%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLA 68 L+AL AVI E FE AA L +T SAVSQRIK LE GQ L+ R VP PT+ G LL Sbjct: 6 LRALMAVIDEGTFEAAADLLRVTPSAVSQRIKALEASTGQVLVRRRVPCIPTDAGSVLLR 65 Query: 69 LLRQVELLEEEWLGDEQTGSTP-LLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVED 127 + RQV++LE E T + +L +A+NADSLATW +P LA L+L VED Sbjct: 66 MARQVQVLEAEASTALGTATASRAVLPVAINADSLATWFVPVLAVAATWQDTTLDLHVED 125 Query: 128 ETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSALL 187 + + + LR+G+V+GAV+ + C V+ LG + Y+ V++ +++ A Sbjct: 126 QGFSSQLLRQGDVMGAVTSDPVPVSGCRVELLGHMRYIPVAAAALRQRFAKGNTVDWA-- 183 Query: 188 KAPVVAFDHLDDMHQAFLQQNFDLPPGSV-PCHIVNSSEAFVQLARQGTTCCMIPHLQIE 246 + PV+ F+ D++ + L G V P H V SSE F+ + G M+P LQ+ Sbjct: 184 RMPVLKFNAKDNLQRGLLAARG---VGQVPPTHTVPSSEGFLAAIKAGLGWGMLPELQLG 240 Query: 247 KELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 ELA G L+ L + LYW ++ +S +R++ +A+ D G LR Sbjct: 241 NELADGSLVLLGKNAHEDVPLYWQSWSLDSERLRRMGEAVRDAGLGKLR 289 >UniRef50_C7NH55 Transcriptional regulator, ArgP family n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NH55_KYTSD Length = 313 Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 105/289 (36%), Positives = 155/289 (53%), Gaps = 19/289 (6%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLA 68 L L A +RE FERAA+ L +T SAVSQR++ LE+ G L+ RT P RPT G+ LL+ Sbjct: 9 LTTLQAAVREGTFERAAKHLNVTPSAVSQRMRALESAVGAVLVSRTKPIRPTSDGEVLLS 68 Query: 69 LLRQVELLEEEWLGDEQTGSTP---------LLLSLAVNADSLATWLLPALAPVLADSPI 119 L Q LL +E +G P + + +A AD+LA LLPA+A + + P+ Sbjct: 69 LALQWSLLRQEAVGQLTASQVPGGGAGARQRITVPIATGADALALVLLPAMAQLEREVPV 128 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 + ED+ + + LR+G VV A+S +P LG L YL +++ + E+Y P Sbjct: 129 TFEVFREDDAHSVDLLRQGRVVCALSSDTVPVPGHRAQTLGTLRYLPLATPEYVERYLPE 188 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQ--NFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 G T AL APVV FD DD+ A+L++ DL P P V ++ F + G Sbjct: 189 GPTAEALADAPVVCFDRKDDLQHAYLRRLVEQDLRP---PVTYVPANREFEEAVLLGLGW 245 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDAL 286 ++P ++++ LASG+L+ + PG ++ L WHR R+ V DAL Sbjct: 246 GLVPQGRVDEHLASGQLVRIGPG-YRDVPLVWHR----PRITSAVLDAL 289 >UniRef50_C2AIB0 Transcriptional regulator, ArgP family n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AIB0_TSUPA Length = 297 Score = 156 bits (394), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 108/285 (37%), Positives = 147/285 (51%), Gaps = 10/285 (3%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLA 68 L L AV+ E+ F AA +L ITQSAVSQRI+ LE G ++ R P RPT+QG LL Sbjct: 7 LTTLVAVVEEQSFGAAAARLGITQSAVSQRIRALEQRVGHVVVTREGPCRPTDQGSVLLG 66 Query: 69 LLRQVELLEEEWLGDEQTGSTPL-LLSLAVNADSLATWLLPALAPVLA-DSPIRLNLQVE 126 L R V LE E LG G+ P +L + VNADSLATW +A RL LQV+ Sbjct: 67 LARGVATLEAEALGRLADGAGPAPVLDVGVNADSLATWFGSVIAAAAGWGDGTRLRLQVD 126 Query: 127 DETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSAL 186 DE T + LR G V+GAV+ + + C V+ LG + YL V + FA ++ G R Sbjct: 127 DENPTADLLRAGAVLGAVTTDPEPVQGCAVEYLGYMRYLPVCTPEFARRWNRGGWWR--W 184 Query: 187 LKAPVVAFD-HLDDMHQAFLQ-QNFDLPPGSV---PCHIVNSSEAFVQLARQGTTCCMIP 241 + PVV FD DD+ L+ PG+V P H + SSE F R G +P Sbjct: 185 REMPVVQFDLRKDDLQNRVLRWHGVTADPGTVDYPPAHRIPSSEGFAHAVRVGLGWGSLP 244 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDAL 286 Q+ L G+L+ + + L+W + +R ++TDA+ Sbjct: 245 EAQLGDALDRGDLVRVGERPVDVK-LFWQSWRLHTRATGRLTDAI 288 >UniRef50_D1BHX4 Transcriptional regulator, ArgP family n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BHX4_SANKS Length = 300 Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 102/274 (37%), Positives = 146/274 (53%), Gaps = 13/274 (4%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLA 68 L AL AV+ E FE AA L IT AVSQRIK LE GQ L+ R P T+ G L Sbjct: 9 LAALAAVVDEESFEAAADALRITPPAVSQRIKALETTVGQVLVRRARPVTVTDAGAPYLR 68 Query: 69 LLRQVELL----EEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQ 124 L RQV L E E G Q+ ++P ++ +A+N+DSL TW+L ALAP+ + ++ Sbjct: 69 LARQVAALVHDTEVEVAGAGQS-TSPAVVPVAINSDSLGTWVLGALAPL--SGAVSFDIH 125 Query: 125 VEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF-----PN 179 ED+ + LR G V+ AV+ + + C V +LG + Y V+S+ FA+++F + Sbjct: 126 REDQDHSAALLRDGTVMAAVTTASRPVQGCTVSRLGVMTYRVVASRVFADRWFSEPPASD 185 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 G +L APVV FD DD+ A+L+ +P P H V SS + R G + Sbjct: 186 GPDVDSLRAAPVVVFDRKDDLQDAYLRAR-GVPAAVPPRHHVPSSADYADAVRLGMGWGL 244 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFA 273 +P Q +L SG L++L P MLYW +++ Sbjct: 245 LPDQQCLDDLRSGALVELDPEHRTDVMLYWQQWS 278 >UniRef50_A1R3I4 Putative transcriptional regulator, LysR family n=2 Tax=Micrococcineae RepID=A1R3I4_ARTAT Length = 313 Score = 154 bits (389), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 105/293 (35%), Positives = 151/293 (51%), Gaps = 12/293 (4%) Query: 15 VIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLALLRQVE 74 V+ E + AA+ L IT SAVSQR+K LE G+ LL R+ P + TE G+ +L L RQV Sbjct: 15 VLSEGTLDAAARLLHITPSAVSQRLKALEQSAGRVLLQRSNPAQATEAGEVVLRLARQVA 74 Query: 75 LLEEEWLGDE---QTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVEDETRT 131 LE + G E + L + + VNADSLA W L ALA V D + +L +DE + Sbjct: 75 QLEAD-AGRELGLSADAAQLAVPIVVNADSLAVWFLKALAQVPGDLNVTFDLHRDDEQHS 133 Query: 132 QERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN---GVTRSALLK 188 LR G V+ AV+ + + C V+ LG + Y V++ F E++FP G + L Sbjct: 134 TSLLRSGTVMAAVTATPEPVQGCRVESLGVMRYRAVAAPHFVERWFPGLDKGFDGATLNA 193 Query: 189 APVVAFDHLDDMHQAFLQQNFD-----LPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHL 243 A V FD D AF+Q F +P P H V +S+ F R G +IP + Sbjct: 194 ATTVDFDRKDTYQWAFVQWAFTAEGRPVPGRKGPRHYVPASQDFGDAIRLGLGWGLIPEV 253 Query: 244 QIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 Q ++A G LI+L PG LYW R+ SR++ +++ + D + LR+ Sbjct: 254 QCGPDIADGRLIELAPGRPFDVQLYWQRWRTASRVLDVLSETVRDVSARYLRR 306 >UniRef50_C6DHV2 Transcriptional regulator, ArgP, LysR family n=4 Tax=Pectobacterium RepID=C6DHV2_PECCP Length = 299 Score = 153 bits (386), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 98/284 (34%), Positives = 147/284 (51%), Gaps = 6/284 (2%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 +Y L+A ++ F+ AA+KL +TQSA+SQRIKQLE+ GQ L+VR P R T GQ Sbjct: 4 NYPCLRAFMEIVHSGSFDIAARKLHVTQSAISQRIKQLEDQLGQVLIVRGNPCRATPTGQ 63 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQ 124 LL Q+++LE E + T +S+AVNADS+ W L A+ S I L++ Sbjct: 64 ALLRHAEQIDMLESELFSTLEM-PTRQRISVAVNADSIDGWFLDAMENACHQSDILLDIL 122 Query: 125 VEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRS 184 VED+ + LR G V+ AVS + + C V+ LG + Y S+ F + YF +G+ Sbjct: 123 VEDQDHSATLLREGRVMAAVSASPEPIQGCGVEYLGTMRYRAYCSQTFHDTYFADGINAD 182 Query: 185 ALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSV--PCHIVNSSEAFVQLARQGTTCCMIPH 242 +L AP++ F++ D + F++ L P + P V S+ AFV +G MIP Sbjct: 183 SLQNAPLLIFNNKDRLQSLFIE---SLVPEVIEPPQQFVPSTAAFVGAIFRGLGWGMIPE 239 Query: 243 LQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDAL 286 GEL+ G LYWHR+ S + ++ ++ Sbjct: 240 HMASSHTEKGELVPFQVGDPVDIRLYWHRWNIRSASLEALSQSV 283 >UniRef50_B4S2Z4 Chromosome replication initiation inhibitor protein n=3 Tax=Gammaproteobacteria RepID=B4S2Z4_ALTMD Length = 294 Score = 153 bits (386), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 92/283 (32%), Positives = 151/283 (53%), Gaps = 1/283 (0%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 DY L+ V+R GFE+ AQ L +TQSAVSQ+IK+LE G P++VRT P + T G+ Sbjct: 3 DYDALRCFHEVLRYGGFEKGAQALNLTQSAVSQKIKRLEQSVGGPVMVRTKPLKATPLGK 62 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQ 124 +LLA +++V +LEE ++ +S+AVN D LATW +A +++ Sbjct: 63 ELLAHIQKVSVLEEALNIKSGLEASAAPISIAVNNDVLATWYSQVMASFSEKHANPVHIV 122 Query: 125 VEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRS 184 D+T+T+E L++G V+ +S + +LG + Y +S F E++ NG++ Sbjct: 123 NADQTQTREILQQGRVMACISQTGTPVTGGQSVRLGTMRYQLYASPRFIERHLSNGISPE 182 Query: 185 ALLKAPVVAFDHLD-DMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHL 243 ++ P + +D D + + ++ ++ P CH SS FV++A G ++P L Sbjct: 183 HVMNTPGLLYDEYDVTLLTDYQRECLNIAPTFTTCHWYPSSHGFVKMALDGVVWALLPTL 242 Query: 244 QIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDAL 286 Q+ +E+ GELI L P L+WH ES + +T A+ Sbjct: 243 QVAQEVKEGELIPLFPQKELGVPLFWHWTTLESAALADLTTAV 285 >UniRef50_Q123B5 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=Q123B5_POLSJ Length = 309 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 103/294 (35%), Positives = 145/294 (49%), Gaps = 13/294 (4%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 D R L AL AVI F AA+ L +T +AVS RIK LE+ GQ LLVR PT GQ Sbjct: 3 DARQLDALAAVIEHGSFGAAAKALSLTLAAVSLRIKSLEDALGQRLLVRGKQLHPTPAGQ 62 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLL-------LSLAVNADSLATWLLPALAPVLADS 117 LL ++Q+ L E + L Q G P LS+AVNADSL W L +AP L Sbjct: 63 ALLGHVKQLRLQEADLLAHLQGGRRPGAKAVPLQSLSVAVNADSLTGWFLAGVAPALEKH 122 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 + L++ V+D+ T + L+ G+V G V+ Q++ C+ + LG + Y V++ K+ Sbjct: 123 RLLLDIVVDDQDHTHDALKNGDVSGCVTTLAQSMRGCVAEPLGVMRYHCVAAPALVAKWR 182 Query: 178 PNGVTRSA--LLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGT 235 T +A LL +P V F+ D + AFL Q+F+L P H V + +AF G Sbjct: 183 TGKETVAAQRLLASPAVIFNRKDALQDAFLAQHFNLRDALYPRHFVPAVDAFELALELGL 242 Query: 236 TCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFA----PESRMMRKVTDA 285 M+P + L ++ PG LYW + P R+ R V +A Sbjct: 243 GWGMVPEQHLAARAHRPPLAEVLPGKTVDVALYWQHWTREPVPAQRLTRAVKEA 296 >UniRef50_D0L7H5 Transcriptional regulator, ArgP family n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0L7H5_GORB4 Length = 302 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 99/286 (34%), Positives = 155/286 (54%), Gaps = 8/286 (2%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLA 68 L+ L AV+ FE AA +L +T SAVSQRIK +E G+ L+ RT P PT G+ L+ Sbjct: 8 LRTLRAVLEYGTFEAAAAELHVTPSAVSQRIKAMEVSVGRVLVHRTKPATPTSDGEVLVR 67 Query: 69 LLRQVELLEEE----WLGDEQTGSTPLLLSLAV--NADSLATWLLPALAPVLADSPIRLN 122 L Q ELL E +GD+ TGS P L+ L + N+DSLATWLLPALA + + P+ + Sbjct: 68 LAEQWELLSAEARLELVGDDGTGSPPRLIHLPIAGNSDSLATWLLPALARIHREHPVVVE 127 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 + +DE+R + LR GEV+GA++ A+ C V LG++ YL V++ F + + P+G Sbjct: 128 VLRDDESRNSDFLRSGEVLGAITSDPVAIRGCTVVPLGSMRYLPVATPHFLDTWMPDGAD 187 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 +L +AP+V++D D + + L + F P + +S + + G ++P Sbjct: 188 EDSLSRAPMVSYDRNDHIQREALGR-FSSHISEPPTVYIPASGEYHRAVELGMGWGLVPT 246 Query: 243 LQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLD 288 QI L +G ++ L+W + S ++ VT ++D Sbjct: 247 AQITDALTTGRVVRFLDADVDVP-LFWQYWKLSSPLLDAVTQIIVD 291 >UniRef50_Q2RWN3 Transcriptional regulator, LysR family n=20 Tax=Alphaproteobacteria RepID=Q2RWN3_RHORT Length = 310 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 153/299 (51%), Gaps = 15/299 (5%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 DY A+ V++ FE+AA+ L +T SA+SQR+K +E+ G L+ R P TE+G+ Sbjct: 3 DYPAALAVALVVQTGSFEKAAKALHVTPSAISQRVKMIEDRLGVSLIERGTPCIATEKGE 62 Query: 65 KLLALLRQVELLEEEWL----GDEQTGSTPL---LLSLAVNADSLATWLLPALAPVLADS 117 L + V +LE++ + G + G+ PL L+LA NADSL TW L A+AP + Sbjct: 63 WLCRHMDHVGMLEKDLIKHMPGLAEAGADPLHRVTLTLATNADSLGTWFLGAVAPFARST 122 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 +++ V+DE T + L RG V+ AV+ + + C V +LGAL Y +S F E+YF Sbjct: 123 DFLVSIAVDDEDYTADWLHRGRVLAAVTSLAKPVKGCRVTRLGALRYQATASPEFFERYF 182 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 GVT L +AP + F D + + ++++ S P H + S++ FV G Sbjct: 183 ARGVTPETLARAPALTFSQKDRLQRDWIRRTLGQSV-SFPTHWLPSTQGFVDACLAGMGW 241 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 M P + L +G L+++ PG L+W ++ R D L D V+ Q Sbjct: 242 GMNPAQMVGAHLQAGRLVEILPGRTLDSPLFW-------QVNRLAADQLADLTRAVVGQ 293 >UniRef50_B9B8W0 Transcriptional regulator, LysR family n=3 Tax=Burkholderia RepID=B9B8W0_9BURK Length = 318 Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 98/293 (33%), Positives = 149/293 (50%), Gaps = 2/293 (0%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 D + L+ +V++ + F RAA L I+ AVSQRIK LE G LL+R PT+ G Sbjct: 12 DRQQLETFASVVQHKHFRRAAAALNISPGAVSQRIKALEESVGAMLLMREPTIVPTQAGD 71 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLL-LSLAVNADSLATWLLPALAPVLADSPIRLNL 123 +L + V LLE + L + P + ++AVNADSLATW P +A LA + L + Sbjct: 72 AILRYIMAVRLLEYDALQRIKPDRFPPMDFAIAVNADSLATWFEP-VAWQLARQHVSLEI 130 Query: 124 QVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTR 183 V+D+ T L RG+V G +S Q Q LP + + +G + Y V+ FA ++F NG Sbjct: 131 IVDDQDHTLTSLARGDVKGCISTQRQPLPGFVAEFVGGMRYRCVAPPEFAGRHFANGFML 190 Query: 184 SALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHL 243 + LK + F+ D +H +FL+ F + G H S A + G ++P + Sbjct: 191 ADALKVTAILFNRKDALHDSFLKSFFGVAVGKYVKHYFPSPGALLNGILNGLGYGLVPAM 250 Query: 244 QIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 Q + +ASG+L+DL P LYWH + E K++ ++ + L Q Sbjct: 251 QADPLIASGQLVDLAPEQSLVVDLYWHHWESEPPPAAKISQLVMAHARHCLVQ 303 >UniRef50_A3K0M9 Chromosome replication initiation inhibitor protein n=1 Tax=Sagittula stellata E-37 RepID=A3K0M9_9RHOB Length = 290 Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 101/290 (34%), Positives = 155/290 (53%), Gaps = 6/290 (2%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 D L AL+AV+R FE AA +L +T SA+SQRI+ LE+ G PL++R P TE G Sbjct: 3 DPAQLSALEAVLRLGAFEAAAAELNVTPSAISQRIRSLEDRVGAPLVLRQSPASATETGA 62 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQ 124 +L R+ LL+ L + ++ + +A+NADSL TW +PALA + ++ Sbjct: 63 RLARHARECALLDAA-LARDLGRASQARVRIALNADSLDTWAIPALA----RTDFLYDIA 117 Query: 125 VEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRS 184 +EDE+ + RLR G+V A++ + Q + C LG + Y+ S F +K+FP G+T Sbjct: 118 IEDESVSDRRLRDGDVTAAITSRVQPVQGCDAVPLGVMRYIATCSPAFRDKHFPEGLTED 177 Query: 185 ALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQ 244 L KAP+V + D + + +L + + P S P H + S+ FV+ AR G + P Sbjct: 178 TLSKAPMVDYSGKDVLQRRWL-ADLNGRPLSPPTHHLPSTHGFVEAARCGLGWGLNPLPL 236 Query: 245 IEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 + L SG+LI + P L + LYW + + +R +T AL VL Sbjct: 237 VADLLESGDLIAMAPDLPRDVPLYWQVRSITAPAIRPLTRALRRAAADVL 286 >UniRef50_Q13XH7 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=Q13XH7_BURXL Length = 317 Score = 150 bits (380), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 98/295 (33%), Positives = 156/295 (52%), Gaps = 7/295 (2%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 D + L+A A++ R F RAA+ L IT+ AVS R+K LE FG PL+VR PT G+ Sbjct: 4 DRQQLEAFSAIVETRHFGRAAKLLSITRGAVSLRLKALEEEFGTPLVVRD-GNVPTPAGE 62 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLL---LSLAVNADSLATWLLPALAPVLADSPIRL 121 LL +R +++LE E +Q T + +++AVNADSLATW A+A +A+ + L Sbjct: 63 VLLRHIRVLKMLEAE--TQQQIKPTDGMHPRVAIAVNADSLATWF-EAVAWEIAERNVAL 119 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 L V+D+ T L +GE +G VS L + +G ++Y V++ FA K+FP G+ Sbjct: 120 ELIVDDQDYTLPLLTKGEAMGCVSTSSNPPTGFLAEPIGMMEYECVANVEFAAKFFPQGL 179 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 +L AP V ++ D +H FL++ DL + H S A + +G ++P Sbjct: 180 GLHGVLAAPAVLYNRKDGLHTLFLERLLDLEVRNYATHYFPSPSALLAAIEKGIGYGLVP 239 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 LQ + +G+L+ L P LYWH + + +++ ++ + H+ L Q Sbjct: 240 CLQASSLIEAGKLVRLAPQHKVEVNLYWHHWETAPSNAQAISELVVRHAHRALIQ 294 >UniRef50_Q1GFE2 Transcriptional regulator, LysR family n=4 Tax=Rhodobacteraceae RepID=Q1GFE2_SILST Length = 306 Score = 150 bits (379), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 99/271 (36%), Positives = 143/271 (52%), Gaps = 8/271 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 R D L AL AV+ F+ A+ L +T SA+SQRIK LE+ G PL+ R+ P TE Sbjct: 2 RYDPLQLAALSAVLDLGSFDAASAALGVTPSAISQRIKALEDRIGTPLVNRSSPCTGTET 61 Query: 63 GQKLLALLRQVELLEEEWLGDE--QTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G ++ V LLE D + TP L LAVNADSLATW + A+ +A + Sbjct: 62 GLRIAKHAEDVALLERRLSRDLSLEGAETPARLKLAVNADSLATWFVEAM---VAAGDVL 118 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 +L ++D+ + + LRRG V AVS + + + C V LG L Y+ +S + ++FP G Sbjct: 119 FDLVIDDQDHSTDWLRRGVVSAAVSAEPRPVAGCDVHALGHLRYVATASPAYMARWFPGG 178 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPG-SVPCHIVNSSEAFVQLARQGTTCCM 239 VT AP + F+ D + +L ++ + PG + P H ++S++AF+ A G M Sbjct: 179 VTPETASVAPCMVFNAKDRLQHRWLARH--VAPGLTPPSHALSSTQAFLDAAAAGLGWGM 236 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWH 270 P E LASG L++L P LYWH Sbjct: 237 NPETLAEPHLASGALVELIPQSPLETPLYWH 267 >UniRef50_Q46UY3 Regulatory protein, LysR:LysR, substrate-binding n=18 Tax=Proteobacteria RepID=Q46UY3_RALEJ Length = 306 Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 105/288 (36%), Positives = 155/288 (53%), Gaps = 7/288 (2%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 DY L AL AVIRE FERAA+ L +T SA+SQRI+ LE G L+VR P RPTE G+ Sbjct: 3 DYAALSALAAVIREGSFERAARALSVTPSAISQRIRLLEEKVGCTLVVRDQPCRPTETGR 62 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTP-----LLLSLAVNADSLATWLLPALAPVLADSPI 119 +L + +V LLE+E L + P + L +AVNADSLATW+ PA+A A++P+ Sbjct: 63 RLCQHIDRVRLLEQE-LQEALPALAPQGLARVTLPVAVNADSLATWIAPAIARFAAENPV 121 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 +++ V+D+ T E LR G V+ AV+ + C LG++ Y +S F ++F + Sbjct: 122 LMDVAVDDQDHTTEWLRCGAVLAAVTATARPAAGCNSSPLGSMRYRAAASPGFMRRHFAD 181 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 GV +L KAP + F+ D++ QA + +P H + S+ AFV A G + Sbjct: 182 GVGAGSLAKAPSLVFNTKDEL-QARWARRLCHRHVELPRHTLPSAHAFVSAAIAGMGWGL 240 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALL 287 P IE L G L++L L+W S ++ ++ +L Sbjct: 241 HPESLIEPYLDDGALVELVADTPLDVPLHWQHARATSGLIEGLSREVL 288 >UniRef50_C7QYI6 Transcriptional regulator, ArgP, LysR family n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7QYI6_JONDD Length = 292 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 101/281 (35%), Positives = 146/281 (51%), Gaps = 6/281 (2%) Query: 16 IRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLALLRQVEL 75 + E F+ AA L I+ SA+SQRIK LE GQ LL RT P RPT G L RQ++ Sbjct: 15 VDEGSFDGAAAILRISPSALSQRIKALETTAGQVLLQRTKPVRPTPAGLPYLQAARQIDA 74 Query: 76 LEEEWLGD-EQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVEDETRTQER 134 + + L + P + +A+NADSL TW++PALA + ++ +D+ T E Sbjct: 75 VLSQTLAQVDAVAPGPPDVPIAINADSLETWIIPALASI--RDVANFHIFRDDQDHTAEL 132 Query: 135 LRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSALLKAPVVAF 194 LR G V+ AV+ + C +LG + YL V++ FA ++FP+G+T +AL KAP V F Sbjct: 133 LRSGTVLAAVTSLADPIQGCESHRLGVMRYLPVATPDFAARWFPHGLTPAALEKAPTVVF 192 Query: 195 DHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIEKELASGEL 254 D D M L P C+ V S+ AFV+ Q + P +QI++ LA+G L Sbjct: 193 DRKDKMQHRLLHAYGVDPNIPARCY-VPSATAFVEAVAQDMGWGLAPEIQIDEALATGSL 251 Query: 255 IDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 I L+ + LYW ++ ES + + L D LR Sbjct: 252 IHLSD--YVDVTLYWQQWKLESPALTVLRRTLADAAAYALR 290 >UniRef50_P67665 Uncharacterized HTH-type transcriptional regulator Rv1985c/MT2039 n=16 Tax=Actinomycetales RepID=Y1985_MYCTU Length = 303 Score = 146 bits (368), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 101/281 (35%), Positives = 152/281 (54%), Gaps = 9/281 (3%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLA 68 L AL AV+ F+ AA++L +T SAVSQRIK LE GQ L+VR P R T G LL Sbjct: 11 LAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTAGIPLLR 70 Query: 69 LLRQVELLEEEWLGDEQTGSTPLL---LSLAVNADSLATWLLPALAPVLADSPIRLNLQV 125 L Q LLE E L E G+ L +++AVNADS+ATW A+ L D + L++++ Sbjct: 71 LAAQTALLESEALA-EMGGNASLKRTRITIAVNADSMATWF-SAVFDGLGD--VLLDVRI 126 Query: 126 EDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSA 185 ED+ + LR G +GAV+ + +P C V LG + YL V+S+PF +++ +G T +A Sbjct: 127 EDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDGFTAAA 186 Query: 186 LLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQI 245 KAP +A++ D + +++ F + P H V ++E F AR G M P Sbjct: 187 AAKAPSLAWNRDDGLQDMLVRKAFRRAI-TRPTHFVPTTEGFTAAARAGLGWGMFPEKLA 245 Query: 246 EKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDAL 286 LA G + + + LYW + +S ++ ++TD + Sbjct: 246 ASPLADGSFVRVC-DIHLDVPLYWQCWKLDSPIIARITDTV 285 >UniRef50_B9NY95 Chromosome replication initiation inhibitor protein n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NY95_9RHOB Length = 293 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 147/292 (50%), Gaps = 9/292 (3%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 D++ L+ L +I E FE AA+KL +T AVSQRI++LE +PLLVR PP TE G+ Sbjct: 3 DHKDLKCLVEIIDEGSFEAAARKLNVTPGAVSQRIRRLEAQVRKPLLVRRQPPYLTESGE 62 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPL-LLSLAVNADSLATWLLPALAPVLADSPIRLNL 123 KL++ R++ L E + P+ +S+A+N DSL W L AL + I + L Sbjct: 63 KLMSYARRIWQLHNEMDRNVLNEPNPVETISVAINHDSLGDWFLSALHAFTNATGIYVEL 122 Query: 124 QVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTR 183 D +T E ++G+V+ AV+ +P C LG L Y V +K FA +YF +G+ Sbjct: 123 TSTDSEQTDELFQKGQVLAAVTSSPNTIPGCKSKLLGPLSYQAVCTKAFAARYFEDGINA 182 Query: 184 SALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHL 243 ++L +AP + +D D + Q L ++F + G P H + + +Q R G +P Sbjct: 183 TSLRQAPALYYDRRDRVTQGVL-KHFGVRKGETPHHYIPGTAELLQATRMGLGWSTVPSG 241 Query: 244 QIEKELASGE-LIDLTPGLFQRRMLYWHRFAPES----RMMRKVTDALLDYG 290 + + GE + L G Q L+W + S + R V DYG Sbjct: 242 YL-RMFGQGETWVQLYSGKIQTE-LHWKTWDLASDEIEALSRHVFQTAKDYG 291 >UniRef50_P94632 Lysine export transcriptional regulatory protein lysG n=5 Tax=Corynebacterium RepID=LYSG_CORGL Length = 290 Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 99/287 (34%), Positives = 151/287 (52%), Gaps = 3/287 (1%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLA 68 L L ++I E FE A+ L I+ SAVSQR+K LE+ G+ L+ RT P + TE G+ L+ Sbjct: 6 LDTLLSIIDEGSFEGASLALSISPSAVSQRVKALEHHVGRVLVSRTQPAKATEAGEVLVQ 65 Query: 69 LLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVEDE 128 R++ LL+ E + L++A+NADSL+TW P V + L L++EDE Sbjct: 66 AARKMVLLQAETKAQLSGRLAEIPLTIAINADSLSTWFPPVFNEVASWGGATLTLRLEDE 125 Query: 129 TRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSALLK 188 T LRRG+V+GAV+ + + C V +LG + +L +++ + Y +G A + Sbjct: 126 AHTLSLLRRGDVLGAVTREANPVAGCEVVELGTMRHLAIATPSLRDAYMVDGKLDWAAM- 184 Query: 189 APVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIEKE 248 PV+ F D + L D P G IV S+E F + R+G ++P Q Sbjct: 185 -PVLRFGPKDVLQDRDLDGRVDGPVGRRRVSIVPSAEGFGEAIRRGLGWGLLPETQAAPM 243 Query: 249 LASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 L +GE+I L M YW R+ ESR + ++TDA++D + LR Sbjct: 244 LKAGEVILLDEIPIDTPM-YWQRWRLESRSLARLTDAVVDAAIEGLR 289 >UniRef50_D2NQ78 Transcriptional regulator n=2 Tax=Rothia mucilaginosa RepID=D2NQ78_9MICC Length = 305 Score = 143 bits (360), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 103/310 (33%), Positives = 157/310 (50%), Gaps = 21/310 (6%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 M R L VI F+ AA L ++ SA+SQRIK +E + G+ L+ R+ P PT Sbjct: 1 MTRFSTDQLTTFATVIEYGTFDAAADILRVSPSAISQRIKAMEQIAGKVLVRRSNPVTPT 60 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPL-LLSLAVNADSLATWLLPALAPVLADSPI 119 + GQ +L + RQ E L++E + E G+ +S+AVNADSLATW L A+ + + I Sbjct: 61 DAGQSVLRIARQSEFLQQE-MERELMGAGGFQSVSVAVNADSLATWFLDAVGILSREDSI 119 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 +L+ E E + LR GEV+ ++ + + +P C V+ LG Y V++ F ++Y P Sbjct: 120 FCDLRREGEFHSSAMLRSGEVMAVITSKPEKIPGCSVETLGVARYWCVATPDFVQRYLPG 179 Query: 180 G---VTRSALLKAPVVAFDHLD---DMHQAFLQQNFDLPPGSV----PCHIVNSSEAFVQ 229 ++R L +APVV +D D D+ +A +++ L P + SS + + Sbjct: 180 WPKIMSREELNRAPVVEYDRKDFVQDVARALIEKEVGLEAEETFTQSPTIYIPSSPDYAR 239 Query: 230 LARQGTTCCMIPHLQIEKELASGELIDL--TPGLFQRRMLYWHRFAPESRMMRKVTDALL 287 G +IP Q +EL SG L+ L TP F LYW R+ S +M VT + Sbjct: 240 AVSSGIAWGLIPEAQCAEELESGHLVKLAATPVEFP---LYWQRWNINSPVMETVTRRV- 295 Query: 288 DYGHKVLRQD 297 H+ R D Sbjct: 296 ---HEAARGD 302 >UniRef50_B9JHJ0 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JHJ0_AGRRK Length = 291 Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 103/294 (35%), Positives = 155/294 (52%), Gaps = 12/294 (4%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 DY+ L+AL V+R+ FERAA+ L IT SA+SQRIK LE G L+VR P PT G Sbjct: 3 DYQQLEALVEVLRQGSFERAARTLNITPSAISQRIKTLEERVGAVLIVRGQPCLPTSVGT 62 Query: 65 KLLALLRQVELLEEEWLGDEQTGST---PLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 +LL +V LLE+E + +E G+T + + +AVNADSL TW A+ A + + Sbjct: 63 RLLHHAERVHLLEQE-VRNEIEGATVSEKITVRIAVNADSLVTWFCEAMK---AFDDVYI 118 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 ++ ED+ T E L G+V AVS + C KLG + Y V++ F EK FP+GV Sbjct: 119 HVLREDQEHTFELLWSGDVAAAVSSTDVEVAGCDRRKLGHMRYRAVATPQFIEKNFPDGV 178 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 T +AL +A + FD DD++ + + F +P H + S+ +Q G + P Sbjct: 179 TPAALSQAVGLRFDTKDDLNDQWTENYFG-KSCPIPTHWLPSTHGILQGTLAGLGWGINP 237 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 + + + L++G L +L LYW+ SR+ + + +L K+ R Sbjct: 238 EILVREHLSTGILQELISDAPVDVPLYWYH----SRVAQPLLSSLTASVEKICR 287 >UniRef50_C6XMP9 Transcriptional regulator, ArgP, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XMP9_HIRBI Length = 294 Score = 133 bits (334), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 96/296 (32%), Positives = 147/296 (49%), Gaps = 12/296 (4%) Query: 7 RTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKL 66 + +A+ AVI+ FE AA +L +T SAVS R+K LE+ G L+ R+ P T G+K+ Sbjct: 5 KAARAVAAVIQTGSFEIAATQLGLTPSAVSHRVKLLEDQLGTILIRRSSPCTATPAGEKV 64 Query: 67 LALLRQVELLEEEWLGDEQTGSTP-LLLSLAVNADSLATWLLPALAPVLADSPIRLNLQV 125 L+ + LLE E D ST + + +AVNADSL TW + ALA ++ + Sbjct: 65 HVYLQTIALLERELTRDLGIHSTDRVTVRIAVNADSLGTWFMSALAQ--NSDEFLFDVII 122 Query: 126 EDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSA 185 ED+ T E L+ GEVVGA+ ++ + C LG + Y+ +S F K+FP+GV++S+ Sbjct: 123 EDQEVTSELLKSGEVVGALGMKEHTIAGCDELYLGNMPYVPCASPAFIAKHFPHGVSKSS 182 Query: 186 LLKAPVVAF---DHLDDMHQA-FLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 LL AP + F DHL D A ++++N L P H + S F+ G M+P Sbjct: 183 LLSAPSLRFSPHDHLQDKWVAQYIEKNIRL-----PIHKLPSFSVFIDGCLTGLGWGMLP 237 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 + LA L L L W S+ + + A+ + L+ + Sbjct: 238 KETVAPYLADKRLALLRENAELDTQLVWRWLRSASKALAPLNQAIRSSAKQTLKPN 293 >UniRef50_A0JRX4 Transcriptional regulator, LysR family n=2 Tax=Micrococcaceae RepID=A0JRX4_ARTS2 Length = 293 Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 90/280 (32%), Positives = 140/280 (50%), Gaps = 7/280 (2%) Query: 10 QALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLAL 69 + L A++ + F+ AA L +T SAVSQRI+ LE G+P+L RT P T+ GQ ++ Sbjct: 10 RTLAAIVSQGSFDAAASHLSVTASAVSQRIRALEVAVGRPVLRRTRPIELTDSGQAVVRF 69 Query: 70 LRQVELLEEEWLGDEQTGSTP---LLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVE 126 RQ+E+L + L DE P L+L +N+DSL TW ++L + E Sbjct: 70 ARQLEMLSAD-LADELQPGNPHPDTRLTLVINSDSLHTWA--LAGLAAVAGTVQLEILRE 126 Query: 127 DETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSAL 186 D+ + E LR G A++ + P C +LG + YL V + FA +F G T +L Sbjct: 127 DQDYSLELLRSGAAAAAITATAKPAPGCTSRRLGIMRYLPVCTPAFAGTWFDGGATAESL 186 Query: 187 LKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIE 246 APV+ FD DD+ +L++ F P P H V ++ F + R G ++P L+I Sbjct: 187 ATAPVIIFDRKDDLQDRYLRR-FSRKPVQPPRHYVPAAHEFGEAIRLGMGWGLLPELEIG 245 Query: 247 KELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDAL 286 +L G L + F L+W ++ S ++ V A+ Sbjct: 246 DDLGQGTLQLMASRSFVDVPLHWQQWRYGSAVLDGVAAAI 285 >UniRef50_C7QF32 Transcriptional regulator, ArgP, LysR family n=33 Tax=Actinomycetales RepID=C7QF32_CATAD Length = 315 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 96/297 (32%), Positives = 150/297 (50%), Gaps = 26/297 (8%) Query: 21 FERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLALLRQVELLEEEW 80 FE AA+ L +T SAVSQRIK LE G+ LLVR+ P RPTE G ++ RQ+ LE+ Sbjct: 21 FEAAARILHVTPSAVSQRIKALEQRTGRVLLVRSKPLRPTESGVAVVRFARQLAWLEDAA 80 Query: 81 LGD------------------EQTGSTPL-LLSLAVNADSLATWLLPALAPVLADSPIRL 121 + + T + P+ LS+AVN+DSL+TW A ++ + Sbjct: 81 RAELGLAGADQADAAHDAHAADGTSAAPVQTLSIAVNSDSLSTWFPEVTARFSPEAAVCF 140 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +L ED+ T E LR G V+ A+S + + C+V LG + Y V++ F ++ P GV Sbjct: 141 DLHREDQDYTDELLRAGLVMAAISSSPKPVQGCVVRPLGRMRYRAVATHGFVRRWLPGGV 200 Query: 182 ----TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 +AL APV+ F+ DD+ FL+ P S P H + +++A++ G Sbjct: 201 GATDLAAALAVAPVIIFNRKDDLQDGFLRGIGA--PASGPRHYLPATDAYLYAVESGYGW 258 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 +IP +Q K+ EL++L PG LYW ++ M+ +V + ++ + L Sbjct: 259 GLIPDVQ-AKQFGQVELVELAPGRPVDVPLYWQQWRLAPPMLTEVGEVAVEVAARRL 314 >UniRef50_A3TNV7 Chromosome replication initiation inhibitor protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TNV7_9MICO Length = 313 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 95/291 (32%), Positives = 142/291 (48%), Gaps = 11/291 (3%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLA 68 ++AL A++ FE AA+ L +T SAVSQR++ LE+ GQ ++ R P TE G L+ Sbjct: 6 VRALAAIVDSGSFESAARTLHLTPSAVSQRVRALESSVGQVVVRRAHPCTATEAGAVLVR 65 Query: 69 LLRQVELLEEE---WLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQV 125 L RQVELLEEE LG T P+ L +A+NADSL TWL+ L + RL + Sbjct: 66 LARQVELLEEESHDLLG--MTREAPVALRMAINADSLDTWLVRLLEAAAGWTDTRLRFSI 123 Query: 126 EDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY-FPNGVTRS 184 DE T LR GEV V+ + + +P C LG + YL V+S A ++ P G Sbjct: 124 ADEHHTLALLREGEVAAVVAAESEPVPGCRSFPLGVMRYLPVASPSLAARFTLPGGAID- 182 Query: 185 ALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQ 244 + PV+ + DD FL + P + S+ G ++P Sbjct: 183 -WEEMPVLGYGDHDDAQGQFLAARG--WSTASPASQIPSAMGLRAALLAGMGWLLVPESS 239 Query: 245 IEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 + +LA G ++ LT + L+WH + S + ++ DA+++ LR Sbjct: 240 VGDDLAEGRVVTLTDEVVDVG-LHWHVWKVPSHRLERLNDAVVEAARVGLR 289 >UniRef50_C3PFW1 Lysine export transcriptional regulatory protein n=9 Tax=Corynebacterium RepID=C3PFW1_CORA7 Length = 294 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/295 (33%), Positives = 148/295 (50%), Gaps = 27/295 (9%) Query: 10 QALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLAL 69 + L A+I E FE AA L IT SAVSQRIK LE G+ LL R P TE G+ + Sbjct: 7 ETLLAIIDEGSFEGAATVLGITPSAVSQRIKALEVSTGRILLRRGTPVTVTEAGEIVAQA 66 Query: 70 LRQVELLEEEWLG--DEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVED 127 R++ L++ E E+ PL ++A+N+DSLATW P + L +++ED Sbjct: 67 ARRMALVQAEADARLTERLSRVPL--TVAINSDSLATWFRPVIQQTAQRGEAALRIRIED 124 Query: 128 ETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSALL 187 E RT LRRG+V+GAV+ + + C LG + Y V++ AE F + T Sbjct: 125 EARTLAMLRRGDVLGAVTREQTPVSGCESTYLGTMRYFAVAAPALAET-FEDWET----- 178 Query: 188 KAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHI-------VNSSEAFVQLARQGTTCCMI 240 P+V F D +++ F + H+ + SSE++V+ R G ++ Sbjct: 179 -LPIVGFGPNDATLDDAMRERF------IDSHVLRARVSQIPSSESYVEAVRYGLGWGLV 231 Query: 241 PHLQIEKELASGELIDLTPGLFQRRM-LYWHRFAPESRMMRKVTDALLDYGHKVL 294 P LQ + L +GEL+ L F + LYW R+ ES ++ +T +LD G VL Sbjct: 232 PRLQAQPLLETGELVLLDD--FPLDIDLYWQRWRLESEVLADLTADVLDAGRAVL 284 >UniRef50_C5C7I2 Transcriptional regulator n=3 Tax=Actinomycetales RepID=C5C7I2_MICLC Length = 307 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 141/294 (47%), Gaps = 10/294 (3%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 + R + L+AL A + F+ AA L I+ SA SQRIK LE GQ LL RTVP RPT Sbjct: 6 LDRMNSDHLRALVAAVDHGTFDAAADSLRISGSAFSQRIKALERQVGQVLLARTVPVRPT 65 Query: 61 EQGQKLLALLRQVELLEEE---WLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 G++LL L RQ LE+E LG G P L +A+NADSL TW P L Sbjct: 66 AAGERLLRLARQTLALEDEALAALGRGDGGRVP--LRVALNADSLDTWWEPVLREAATWD 123 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 + L +Q ED+ T LR G VV AV+ + C LG + Y V + F + Sbjct: 124 DVVLQMQSEDQEHTAVLLRDGAVVAAVTDDPTPVAGCSSTPLGTMRYHAVCAS-FLLELH 182 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSV-PCHIVNSSEAFVQLARQGTT 236 + R P+V + D + + L++ P V P H+V S A+++ G Sbjct: 183 RDARGRVDFGSLPIVDYGPRDGLQRTVLRRVTRGRPAIVPPTHLVPSVHAYLRAVELGLG 242 Query: 237 CCMIPHLQIEKELASGELIDL--TPGLFQRRM-LYWHRFAPESRMMRKVTDALL 287 M+P QI + G DL P L + L+W R+ + + ++TDA+L Sbjct: 243 WGMLPSAQIPPGVLEGRHPDLEPIPALGAADVHLHWQRWTAGTAALDRLTDAVL 296 >UniRef50_A9DKT8 Chromosome replication initiation inhibitor protein n=1 Tax=Shewanella benthica KT99 RepID=A9DKT8_9GAMM Length = 188 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 61/157 (38%), Positives = 91/157 (57%) Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L L V+DE+ T L+ GE VG V+ QAL C + LG ++YL V++ F E+YFP Sbjct: 12 LELIVDDESYTHHLLKNGEAVGCVTTSKQALTGCSSEYLGDMEYLCVATAEFIERYFPIT 71 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 V++++L AP V F D +H+ +L Q F + GS H + SSE+F+ QG ++ Sbjct: 72 VSQTSLELAPAVVFSTKDKLHEQYLSQYFKMKTGSWREHKIPSSESFLDAILQGLGYGLV 131 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESR 277 HLQ E L G LI++TPG +R LYW + +++ Sbjct: 132 GHLQAEPLLKKGLLIEITPGKRKRVSLYWQHWNIKAK 168 >UniRef50_UPI0001BC2B66 transcriptional regulator, ArgP, LysR family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI0001BC2B66 Length = 316 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 94/304 (30%), Positives = 140/304 (46%), Gaps = 32/304 (10%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLA 68 ++AL AV+ E E A L +T SA SQRI+ LE+ GQ L+ RT P TE G+ +L Sbjct: 11 VKALAAVVDEGTVEGGAFVLGVTPSATSQRIRTLESRIGQVLIRRTNPITVTEAGEAVLK 70 Query: 69 LLRQVELLEEE--------------WLGDEQTGS------TPLLLSLAVNADSLATWLLP 108 R++ELLE E +G + + P +L + VNADSL+TW P Sbjct: 71 YAREIELLESETMDRLHGIDIDAPDGIGKDAGAAPNQRRRVPTVLRIGVNADSLSTWFRP 130 Query: 109 ALAPVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVS 168 A V I + ++V D+ + L GEV+G ++ V KLG++ Y+ V+ Sbjct: 131 IFAEVAGWDDIVIRIEVADQDKALPLLTSGEVLGTITSAEVGGYGTQVQKLGSMRYVAVA 190 Query: 169 SKPFAEKYFP----NGVTRSALLKAPVVAFDHLDDMHQAFLQQN--FDLPPGSVPCHIVN 222 +K KY L P+V F DD+ +L++ +PP SV V Sbjct: 191 TKGLLAKYGAEVDGGSFAEVDLGSLPMVNFGKDDDLQFTYLRRAGVTTIPPMSV----VP 246 Query: 223 SSEAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKV 282 SS F G +IP Q+ S +L+ L+ LYWH + S + ++ Sbjct: 247 SSWEFAAAVEAGVGWGLIPITQLGD--LSKDLVPLSSEPNIDVPLYWHHWNLASEKLGRL 304 Query: 283 TDAL 286 T+AL Sbjct: 305 TEAL 308 >UniRef50_B2JXM7 Transcriptional regulator, LysR family n=4 Tax=Burkholderia RepID=B2JXM7_BURP8 Length = 311 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 94/294 (31%), Positives = 143/294 (48%), Gaps = 11/294 (3%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLA 68 L+ AV+ R F +AA L I+ +A ++R+K+LE G LL+R PT+ G+++ Sbjct: 14 LETFAAVVEHRSFAQAASALSISSAAATRRVKRLEQSMGALLLLREPAVLPTKAGEEVFR 73 Query: 69 LLRQVELLEEEWLGDEQTG-STPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVED 127 V L E+E L G + L+LAVNADSLATW P + LA + L + V+D Sbjct: 74 HFMTVRLHEDELLRRVMPGRAATTALALAVNADSLATWFEP-VTRELAQHHVALEIVVDD 132 Query: 128 ETRTQERLRRGEVVGAVSIQHQALPSCLVDK-----LGALDYLFVSSKPFAEKYFPNGVT 182 + T E L RG+V G +S Q P +VD+ +G + Y V++ F +YF G+T Sbjct: 133 QDHTLEALARGDVKGFLSTQ----PEPVVDRFVAAPVGQMRYQCVATPGFEREYFAGGLT 188 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 L+A + FD D +H AF F + G P H S A + ++P Sbjct: 189 LPGALEATAILFDRKDALHDAFFASYFGVTVGRYPRHYFPSPVALLNAILDELGYGLVPA 248 Query: 243 LQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 +Q E + SG L+ L P LYWH + E + ++ ++ + L Q Sbjct: 249 MQAEPLIGSGRLVALAPAHDLLIDLYWHHWEEEPEPLATISALVMAAARRSLVQ 302 >UniRef50_A4JNN0 Transcriptional regulator, LysR family n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JNN0_BURVG Length = 327 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 84/295 (28%), Positives = 141/295 (47%), Gaps = 2/295 (0%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 D + L+A V+ R FERAA++L IT++A+SQRIK LE+ LLVR+ P T G+ Sbjct: 3 DRQQLEAFAVVVETRSFERAAERLNITRAAISQRIKALEDALAAALLVRSKPLALTPVGE 62 Query: 65 KLLALLRQVELLEEEWLG--DEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 L V LLE + D + + L++ V+A S+ W ++ + + L Sbjct: 63 VLFKHTTAVRLLEADTFSQIDRRGNRGGMQLAVGVDAYSIDAWFGRVAHRIIERNVLELE 122 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 + V+D L RGE+VG+VS + + C+ LGA+ Y V+S F E++F G Sbjct: 123 VVVDDADPAFPALARGEIVGSVSTVSRPVQGCIAVPLGAMIYRCVASSAFIERHFEKGFN 182 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 A AP V + + + F + G +++ S + ++ + G M+P Sbjct: 183 LHAASLAPAVEVGRRTALLERYFDAAFGVSVGRYRRNLLPSIASQLKTIQSGLGYGMLPE 242 Query: 243 LQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 + L G L+D+ + LYWHR+ + +++ L++ +VL D Sbjct: 243 QTVLPFLEDGRLVDVRHDMPLPVPLYWHRWRAAPPVCETLSEELVNRAREVLAAD 297 >UniRef50_B9TIZ9 Chromosome initiation inhibitor, putative n=1 Tax=Ricinus communis RepID=B9TIZ9_RICCO Length = 181 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 94/181 (51%), Gaps = 1/181 (0%) Query: 114 LADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFA 173 + D L+++++D+ T LR G VVG V+ + +P LG + Y V++ FA Sbjct: 1 MRDGDCMLHIRLDDQDHTLSMLREGRVVGCVTSETAQVPGTTATPLGIMRYFCVATPAFA 60 Query: 174 EKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQ 233 ++FP+G+T + +APV+ FD D + F+ Q+ G P H ++SSE +V+ Sbjct: 61 ARWFPDGMTEQTVRRAPVMTFDRKDMLQTRFIAQHTGY-TGRYPHHALSSSEGYVRFVEA 119 Query: 234 GTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 G M+P Q ++L G LIDL PG + L WH + ++ R ++D L+ K Sbjct: 120 GFGYGMLPLQQCSRQLEEGTLIDLAPGKWLDVELIWHMWDIQTPFTRALSDNLIATARKS 179 Query: 294 L 294 L Sbjct: 180 L 180 >UniRef50_C9YG90 Chromosome initiation inhibitor n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YG90_9BURK Length = 222 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 86/149 (57%), Gaps = 6/149 (4%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLA 68 L + AV+RE FERAA+ L IT SAVSQRI+Q+E G L+VR P TE G ++ Sbjct: 7 LATVAAVVREGSFERAARVLHITPSAVSQRIRQMEERVGAVLIVRGQPCTATEAGARICR 66 Query: 69 LLRQVELLEEEW------LGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 V +LE + L E + + +A+NADSL+TW + A+ A S + L+ Sbjct: 67 HADSVAMLEHDLRRDLPALAPEDAQAEHTTIRIAINADSLSTWFVTAMRDFCAQSRVLLD 126 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQAL 151 + V+D+ +T E LRRG V+ AV+ +A+ Sbjct: 127 VAVDDQDQTNEWLRRGHVLAAVTSHAKAV 155 >UniRef50_UPI000190906C chromosome replication initiation inhibitor protein n=1 Tax=Rhizobium etli CIAT 894 RepID=UPI000190906C Length = 293 Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 1/179 (0%) Query: 91 LLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQA 150 L + +A NADSL TW + AL+ S +++ ++DE T E L+RG V+ A++ + Sbjct: 89 LTVHVATNADSLGTWFMTALSTYARMSNNLIDVVIDDENHTSEWLQRGRVIAALTGIEKQ 148 Query: 151 LPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFD 210 + C LG++ Y +S F +++F GV L AP + F+ D + ++ Q F Sbjct: 149 VQGCRRIALGSMRYRATASPEFVKRHFSAGVNSETLRTAPALTFNQKDKLQNRWIAQLFR 208 Query: 211 LPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYW 269 + P H + S++AFV + G M P I L +G L++L P L+W Sbjct: 209 -DDVACPTHFLPSTQAFVDASIAGMGWGMNPEYLIRHHLQAGALVELIPDQPLDVSLFW 266 >UniRef50_A4EVI2 Chromosome replication initiation inhibitor protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EVI2_9RHOB Length = 174 Score = 76.6 bits (187), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 7/173 (4%) Query: 125 VEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRS 184 ++D+ + + LRRGEV AV+ + C +LG + Y +S + +FP G Sbjct: 2 IDDQDHSADWLRRGEVSAAVTAHGTPVTGCDAFRLGTMQYTATASPRYVAHWFPEGCNTE 61 Query: 185 ALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSV---PCHIVNSSEAFVQLARQGTTCCMIP 241 AL +AP + F+ D + + +L D GS P H + S++AF A+ G M P Sbjct: 62 ALAQAPCITFNQKDALQRRWL----DKAAGSYVSPPSHFLPSTQAFADAAKAGLGWGMNP 117 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 I++EL +G+L++L L W + + K+T A+L K L Sbjct: 118 VNLIQEELQNGDLVELKADSRLEVALEWQVSRIMAPALAKLTRAVLGCARKHL 170 >UniRef50_C5EHA6 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHA6_9FIRM Length = 306 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 75/251 (29%), Positives = 115/251 (45%), Gaps = 26/251 (10%) Query: 20 GFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQGQKLLALLRQVELLEE 78 F +AA L + QS VS RIK LE G+ LL+R R T G+ L +Q+++L+E Sbjct: 17 SFSKAADVLHVVQSTVSNRIKSLEEYTGEQLLIRDKSGIRLTPAGRTFLNYAKQMQILDE 76 Query: 79 EWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVEDETRTQER---- 134 L + S +N S+ L AL P+L + R + T Sbjct: 77 TALKEIHMASA---YEDCLNIASVQWILSYALEPMLTEFSSRYPKIATNLTSAHSEEIIP 133 Query: 135 LRRGEVVG----AVSIQHQALPSCLVDKLGALDYLFVSSKP-FAEKYFPNGVTRSALLKA 189 L + +V + I + L S L K LFV S FA+ F +G++R L Sbjct: 134 LLQNQVYDLALISYKINNANLQSVLFCKTRI---LFVGSACRFAD--FKDGISREQLENI 188 Query: 190 PVVAFDHLDDMHQAFLQQNFDLPPGS---VPCHIVNSSEAFVQLARQGTTCCMIPHLQIE 246 P++ D + + +++ +N LP V C+++ S++AF GT CC +P L I+ Sbjct: 189 PLIYSDIWQN-YLSYVSENL-LPESKTFQVHCNMLESAKAF---CVAGTGCCFLPELMIK 243 Query: 247 KELASGELIDL 257 KEL G LI + Sbjct: 244 KELEEGNLIHI 254 >UniRef50_A7JY25 Transcriptional regulators LysR family n=9 Tax=Vibrionaceae RepID=A7JY25_VIBSE Length = 304 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 10/166 (6%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-----VPPRP 59 DY L+ L ++ R AA++LC +Q AVS+ ++++ ++F +LVR + P+ Sbjct: 4 DYNLLKVLAVILETRNTTTAAERLCTSQPAVSRSLRKIRDLFNDDILVRKGTNMELTPKA 63 Query: 60 TEQGQKLLALLRQVE-LLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 E +L ++ ++ L+ D T S+ +L +A+N+ S+A W A +LA Sbjct: 64 EEIKAQLSGIINDIDKLVNVSHSFDPATESS--VLRVAINS-SIAQWFSAAFTQLLAKEA 120 Query: 119 IRLNLQVEDETRTQ-ERLRRGEVVGAVSIQHQALPSCLVDKLGALD 163 +NL +ED T T +++ GE+ ++ LP LV K G D Sbjct: 121 PFMNLVIEDWTETTPDKIDAGEIAFGINYFPMELPKHLVQKKGGRD 166 >UniRef50_B0S334 Transcriptional regulator LysR family n=2 Tax=Finegoldia magna RepID=B0S334_FINM2 Length = 299 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 70/308 (22%), Positives = 132/308 (42%), Gaps = 26/308 (8%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQG 63 D + L+ V+ F AA++L +TQ +S IKQ+EN LL RT T +G Sbjct: 2 DLKQLETFITVVEWDSFSEAAKRLYLTQPTISTHIKQIENELNTELLKRTTKKLELTPEG 61 Query: 64 QKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSL-ATWLLPALAPVLADSPIR-- 120 ++ + + + E + + S L + + A S+ AT++LP+L S I+ Sbjct: 62 REFYNYAKSISRIMESM---QDSFSKKSLTTFNIGASSVPATYILPSLLSKYHKSHIKTL 118 Query: 121 LNLQVEDETRTQERLRRGE----VVGAVSIQHQ-ALPSCLVDKLGALDYLFVSSKPFAEK 175 +N+ D T + + G +VG ++ + L DKL V P+ + Sbjct: 119 VNIIQSDSLTTIDGVINGSINIGIVGMTTMDKELTFEKVLSDKL-------VIVTPYNDY 171 Query: 176 YF---PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIV---NSSEAFVQ 229 Y N V S++LK P++ + + ++ L +++ NS+E Q Sbjct: 172 YNALKKNNVKISSILKEPIIFREQGSGTLKESMKMIDALGISKNSLNLIGTANSTETLKQ 231 Query: 230 LARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDY 289 R G ++ L +E+E+A+ +LI F+ ++ + + + V D + + Sbjct: 232 CIRSGMGISIMSKLSVEEEVANNQLISFKIDDFESVRHFYLVYRSNTLLSEPVID-FVKF 290 Query: 290 GHKVLRQD 297 K L ++ Sbjct: 291 AKKYLEEN 298 >UniRef50_B8CNJ7 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CNJ7_SHEPW Length = 278 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/130 (36%), Positives = 68/130 (52%), Gaps = 5/130 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPT 60 K P R LQ +A R+ F +AA +LCITQSAVS +++QLE FG+ L R R T Sbjct: 3 KIPPLRALQVFEAAARQSHFSKAADELCITQSAVSHQVRQLEEHFGERLFKREGRQLRLT 62 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-- 118 +GQ L L ++ E L + +G + L LAV + WL+P L+ P Sbjct: 63 TKGQHLYESLERI-FNELSDLSKKISGDSNDQLRLAVYSSFAIKWLIPRLSDFRRLHPEI 121 Query: 119 -IRLNLQVED 127 IRL++ +D Sbjct: 122 KIRLDMITDD 131 >UniRef50_C7QH07 Transcriptional regulator, LysR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QH07_CATAD Length = 300 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 78/273 (28%), Positives = 115/273 (42%), Gaps = 28/273 (10%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPPRPTEQG 63 D R L+A AV+ G AA +L QS+VS +++ LE G P+L RT + PTE G Sbjct: 2 DTRQLRAFLAVVEAGGISAAADQLGYAQSSVSDQLRTLERDLGTPVLNRTSIGTVPTEAG 61 Query: 64 QKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLP---------ALAPVL 114 Q+LL R++ L+ E + +G PLL A+ SLA LP A P Sbjct: 62 QRLLPYARRMLDLDSE-MRRTVSGHRPLLRIGALQ--SLADEWLPEMLTAFDHGAAGPET 118 Query: 115 ADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVS--SKPF 172 AD + + V TR E L+ G + ++ +G + V+ S P Sbjct: 119 AD----VTVTVTSRTRLMEELQEGRLDAVFTLDSGPAYDGPTAVVGTDRVVLVTAPSHPL 174 Query: 173 AEKY--FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQL 230 A + V R+ + + Q F + DL P I S A +L Sbjct: 175 ASVHPLTLEDVRRTEFMVTEIGCI-----YRQLFDESGRDLGPSLKIAMITGSLNALRRL 229 Query: 231 ARQGTTCCMIPHLQIEKELASGELI--DLTPGL 261 G ++P ++ EL SG+L+ DL GL Sbjct: 230 TVNGRGAALLPRFSVQAELDSGDLVMLDLKQGL 262 >UniRef50_C8WTC6 Transcriptional regulator, LysR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WTC6_ALIAD Length = 304 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/259 (27%), Positives = 113/259 (43%), Gaps = 6/259 (2%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRPTEQG 63 D++ L V RER F RA+ L QS+VS +I+ LE G PL R + TE G Sbjct: 2 DFKQLHTFAVVARERSFTRASALLNYAQSSVSAQIQALEQELGTPLFDRIGRSVQLTEVG 61 Query: 64 QKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNL 123 QK+L L+ + +E E + G P + +SL + LP V R++L Sbjct: 62 QKVLPLVHDLLQMESELRSIAKGGYEPSGTLVVGAPESLIAYRLPPALAVFHQRYPRVHL 121 Query: 124 QVEDETRTQER--LRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 Q ++ + R L RGE+ A+ ++ A P+ L + + + + + P P+ Sbjct: 122 QFRADSCAEHRAALARGEIDVALLLEQSAPPAGLAFQTLTPERIVLVAHPKIAASNPSAS 181 Query: 182 TRSALLKAP---VVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 T S + A V A + F +Q + S EA Q A G Sbjct: 182 TPSLIESAVLLLVEASKGGASYREVFERQMMQMGIRIQRSMEFASVEAVKQCAIAGLGIA 241 Query: 239 MIPHLQIEKELASGELIDL 257 ++P + +++EL +G+L L Sbjct: 242 LLPEMVVQQELDAGKLTRL 260 >UniRef50_B6A0Z6 Transcriptional regulator, LysR family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B6A0Z6_RHILW Length = 104 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/75 (46%), Positives = 48/75 (64%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 +Y L+ALDA+IR FE AA+ L I+ SAVSQRI +LE L++R P R T++G Sbjct: 3 NYLALEALDAIIRAGSFENAAEALHISPSAVSQRIAKLERHVSARLVIRGTPCRATDEGA 62 Query: 65 KLLALLRQVELLEEE 79 L+ L +V L+E E Sbjct: 63 LLIQHLEKVRLMESE 77 >UniRef50_UPI0000382587 COG0583: Transcriptional regulator n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000382587 Length = 181 Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 8/108 (7%) Query: 150 ALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFL---- 205 A+P C LG + Y +S F E++FP+G T +AL +APV+AFD DD+ + +L Sbjct: 7 AVPGCRSTLLGRMRYRPCASPAFVERWFPDGPTAAALSRAPVLAFDRKDDLQERYLRLRA 66 Query: 206 -QQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIEKELASG 252 + L P P H V +S F + G M+P LQ + +G Sbjct: 67 QEAGTALDP---PRHYVPASHEFCRAVELGMAWAMLPDLQSARAERAG 111 >UniRef50_A3NC71 Transcriptional activator MetR n=79 Tax=Proteobacteria RepID=A3NC71_BURP6 Length = 353 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 46/112 (41%), Positives = 60/112 (53%), Gaps = 9/112 (8%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQG 63 ++R LQ L A+ RAAQ LC+TQSA+S ++K LE FG PL VR + P T G Sbjct: 50 EFRHLQTLVALRDTGNLSRAAQVLCLTQSALSHQLKALETHFGLPLFVRKSAPLTFTAAG 109 Query: 64 QKLLALLRQVELLEEEWLGDEQ-----TGSTPLLLSLAVNADSLATWLLPAL 110 ++LLAL QV EE D TG L +AV + WL+PA+ Sbjct: 110 KRLLALAEQVVPAIEEAERDIARLALGTGGA---LRIAVECHTCFDWLMPAM 158 >UniRef50_D2T424 Carbapenem-hydrolyzing beta-lactamase transcriptional activator n=2 Tax=Erwinia pyrifoliae RepID=D2T424_ERWPY Length = 292 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 69/255 (27%), Positives = 103/255 (40%), Gaps = 12/255 (4%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP--TE 61 P R L + F RAAQ L +T SAVS +IKQLE G+PL +R + R T Sbjct: 6 PSLRALHYFHQAALRQSFSRAAQSLNVTHSAVSHQIKQLEEWLGKPLFLR-IKGRVQLTA 64 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLA-DSPIR 120 G++L A Q E D+ L+++ LA WL+P + + S I Sbjct: 65 DGERLKACCMQ-SFRSIEVTCDKIRACDLHSLTISCAPSFLAQWLIPRINRFTSRHSEIA 123 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L Q + ER+R + Q Q + + L +DY+ P F Sbjct: 124 LTFQTHVDL---ERVRSEHTDILIVSQQQPVQKDIAATLITVDYIGPVCSPAFSSRFSYE 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 S L P++ D + + ++ H N + A +Q AR G M Sbjct: 181 TDFSTL---PLLHADTKLNAWSEWAKKTGARGDFWAGNHFDNLTLA-IQAARNGMGIIMT 236 Query: 241 PHLQIEKELASGELI 255 P + ++KE+ G LI Sbjct: 237 PQILVKKEIFDGSLI 251 >UniRef50_A9IQK9 Transcriptional regulator, LysR-family n=6 Tax=Burkholderiales RepID=A9IQK9_BORPD Length = 306 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 76/264 (28%), Positives = 109/264 (41%), Gaps = 21/264 (7%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR 58 M+R P LQA + R F RAAQ+LC+TQ AVS+++K LE+ G L +R Sbjct: 1 MRRFCPSLTDLQAFEVAARHSSFTRAAQELCVTQGAVSKQVKHLESFLGVELFLRIRQGL 60 Query: 59 P-TEQGQ----KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPV 113 TE GQ K+ A L Q+E E + + G T L L A WL+P LA Sbjct: 61 VLTEAGQSYLKKIQAGLGQIEAATVELIAHQGQGGT---LHLTCMPTFGARWLIPRLATF 117 Query: 114 LADSPIRLNLQVED-ETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPF 172 + +R ++ VE R E+ AV P D + D + V S Sbjct: 118 MR---VRPDIHVEFLPHRQGYDFSTPELDAAVRFGDGIWPGSGADYIVGRDIVPVCSP-- 172 Query: 173 AEKYFPNGV-TRSALLKAPVVAF-DHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQL 230 + +G + LL+ P++ L+ F Q D ++ + Q Sbjct: 173 --RLLGDGCQSADELLRYPLLHHTSALEGWRDWFEQAGCDTRR-ALEGARFDQYSLLSQA 229 Query: 231 ARQGTTCCMIPHLQIEKELASGEL 254 A G +IP IE EL G+L Sbjct: 230 AAAGFGIALIPRCLIEDELRDGKL 253 >UniRef50_A3JQF3 Transcriptional regulator, LysR family protein n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JQF3_9RHOB Length = 305 Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 77/281 (27%), Positives = 122/281 (43%), Gaps = 22/281 (7%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQGQ 64 ++ L+A VI F AA L TQ +S RI LE G PLL+R + P R TE G+ Sbjct: 8 FKQLEAFTFVIDAGTFRAAATALGTTQPNISARIAALETALGAPLLIRDSGPVRLTEHGE 67 Query: 65 KLLALLRQVELLEEEWLGD---EQTGSTPLL---LSLAVNADSLATWLLPALAPVLADSP 118 KLL R+V W G+ ++ G L+ L L V TWL L + P Sbjct: 68 KLLKKAREV-----LWAGEALIQEAGRQELIDETLRLGVTELVACTWLQDFLRLMRETYP 122 Query: 119 -IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLV--DKLGALDYLFVSSKPFAEK 175 IR+ L+V+ T RL +G++ +++Q S + LG +Y + +++ A + Sbjct: 123 NIRIQLEVDLATEIDARLMQGQL--DLALQSGPFKSTTFANEALGHENYCWFANRMLAGQ 180 Query: 176 YFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSS--EAFVQLARQ 233 T + L + ++ H G IV+SS A V + + Sbjct: 181 -IDGKPTLADLFELTILT--HAKHTQACAALHLMAEKNGLRRERIVHSSALSACVPMVLE 237 Query: 234 GTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAP 274 G ++P ++ ELASG+L + + + R+AP Sbjct: 238 GLGVALLPERLLKPELASGDLHKIEMDWLPDPLSFHARYAP 278 >UniRef50_B2VHX3 LysR-family transcriptional regulator n=2 Tax=Enterobacteriaceae RepID=B2VHX3_ERWT9 Length = 291 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 74/259 (28%), Positives = 109/259 (42%), Gaps = 20/259 (7%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP--TE 61 P R L + F RAAQ L +T SAVS +IK LE G+P+ +R + R T Sbjct: 5 PSLRALYYFHQAALHQSFSRAAQSLNVTHSAVSHQIKLLEEWLGKPVFLR-INGRVQLTA 63 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLA-DSPIR 120 G++L A Q E D+ LS++ LA WL+P + + S I Sbjct: 64 DGERLKACCTQ-SFRSIEATCDKIRARDLYTLSISCAPSFLAQWLIPRINRFTSRHSDIA 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQH-QALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 L Q + ER+ RGE + + H Q + + L A+DY+ P F Sbjct: 123 LTFQTHIDL---ERV-RGEHTDILIVSHEQPVQQDITATLIAVDYIGPVCSPEFSHRFHY 178 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQN---FDLPPGSVPCHIVNSSEAFVQLARQGTT 236 S L P++ D + + ++ D GS H N + A +Q AR G Sbjct: 179 ETDFSTL---PLLHADTKLNAWSEWAKKTGARGDFWAGS---HFDNLTLA-IQAARSGMG 231 Query: 237 CCMIPHLQIEKELASGELI 255 M P + ++KE+ G LI Sbjct: 232 IIMTPQILVKKEILDGSLI 250 >UniRef50_D0D8S3 Transcriptional regulator, LysR family n=1 Tax=Citreicella sp. SE45 RepID=D0D8S3_9RHOB Length = 300 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 83/289 (28%), Positives = 123/289 (42%), Gaps = 36/289 (12%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP--TE 61 PD R LQ + R F RA ++L +TQSAVS++I+ LE G+ LL + R T Sbjct: 9 PDMRILQTFELAARHGNFTRAGEELALTQSAVSRQIRDLEEQLGK-LLFERLRGRVVLTR 67 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNA-DSLAT-WLLPALAPVLADSP- 118 G+ LL ++++ + E + G+ + L+VNA S A WL+P LA LA P Sbjct: 68 AGEDLLPEVQRLLRMAERTMRHATAGAAGETV-LSVNALPSFAQRWLVPRLAEYLAQHPG 126 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQ-----HQALPSCLVDKLGALDYLFVS-SKPF 172 +RL+L RG + +Q H P + G YL P Sbjct: 127 LRLDLST-----------RGGIFDFDEVQCDLAIHYGQP---IWPGGCCTYLCSEIVVPV 172 Query: 173 AEKYFPNGVTRSALLKAPVVAFDHLDD----MHQAFLQQNFDLPPGSVPCHIVNSSEAFV 228 A P AL + P + HL + + F +Q +L + H V+ + Sbjct: 173 AGAALPAVTRAEALAERPKI---HLAERPALWSEWFGRQGVELENAN-EGHWVDEIALAI 228 Query: 229 QLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESR 277 + R G ++P IE+ELA+G L F M Y + PE R Sbjct: 229 ETVRAGLGYALLPLYLIEQELAAGTLRVALDAPFSTDMAY-YIVTPEGR 276 >UniRef50_B8IBH9 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IBH9_METNO Length = 193 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 8/134 (5%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQ 62 P L+A +A R R RAA++LC+T AVS+ +K LE G PL+ R + PT + Sbjct: 6 PSLVALRAFEAAARHRSLTRAAEELCVTHGAVSRHVKALEAALGVPLMRRGALSSDPTPE 65 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 G L L L + + E+ TP L+L+ +A + WL+P ++ A + + Sbjct: 66 GACLAEGLTAAFGLIQATI--ERV--TPGPLTLSCSASIMLCWLIPRMSAFHA---VHGD 118 Query: 123 LQVEDETRTQERLR 136 +QVE T+++ ++ Sbjct: 119 VQVELNTKSRNSIK 132 >UniRef50_B9K5H2 Transcriptional regulator LysR family n=1 Tax=Agrobacterium vitis S4 RepID=B9K5H2_AGRVS Length = 296 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 76/313 (24%), Positives = 133/313 (42%), Gaps = 45/313 (14%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRPTEQGQ 64 + L+ AVI R F +A + +++ A+S+ I++LE G L+ RT P+E G Sbjct: 4 FTALKVFCAVIEARSFTKAGNNIGLSRPAISKNIRELEAHVGVTLVNRTTRGVMPSEAGS 63 Query: 65 KLLALLRQVELLEEEWLGDE---QTG---------STPLLLSLAVNADSLATWLLPALAP 112 + ++ ELL DE Q+G + P+ L L + +LP L Sbjct: 64 RYYQIVS--ELLWRHEQADEVASQSGAELRGTLRVTMPVTLGLHL--------ILPVLPQ 113 Query: 113 VLADSP-IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDK-LGALDYLFVSSK 170 ++P L+L + +E +++L G AV + S L+ + +G++ Y ++ Sbjct: 114 FNEENPECSLDLCLSEE---KQQLVEGNFDVAVRASQRLEDSTLMSRCIGSVTYAICAA- 169 Query: 171 PFAEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFL-QQNFDLPPGSVPC-------HIVN 222 P+ V +S LK+P DH +H A + Q + C H N Sbjct: 170 -------PSYVQKSQSLKSPKDLEDHQLVVHGANIGDQKWRFSAQGESCYVSVRAQHKSN 222 Query: 223 SSEAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKV 282 SEA L G IP + +ELA G L++L + + + P+S + + Sbjct: 223 CSEAIKSLTVAGMGIARIPRPYVSRELAEGRLVELLSDWTMEPLTIYAMY-PQSNFLPRR 281 Query: 283 TDALLDYGHKVLR 295 T +D+ + L+ Sbjct: 282 TRLFIDFMSRALK 294 >UniRef50_A6D585 Transcriptional regulator n=5 Tax=Vibrionales RepID=A6D585_9VIBR Length = 298 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 7/171 (4%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQGQKLL 67 L + R F AAQ+L +TQ VSQRIK+LE + L +R T T +GQ++ Sbjct: 14 LHTFNVAARHLSFTHAAQELFLTQGGVSQRIKKLETLLNFNLFIRKTRKLELTPEGQRVF 73 Query: 68 ALLR-QVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVE 126 ++L E + E L D QTG L +A + ++WL+P L P NL ++ Sbjct: 74 SILNTSFESIFSE-LSDIQTGELTGELYIATSPYFASSWLMPRLPDFRHQYP---NLSIK 129 Query: 127 DETRTQERLRRGEVVGAVSIQHQAL-PSCLVDKLGALDYLFVSSKPFAEKY 176 +T+ + + E A + L P+ +L A + V S +AEK+ Sbjct: 130 LDTKQNQSEFQFEPYDAAIFYSEGLYPNHFSRRLFAGQRIPVCSPEYAEKH 180 >UniRef50_Q2S997 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S997_HAHCH Length = 323 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 74/272 (27%), Positives = 124/272 (45%), Gaps = 25/272 (9%) Query: 7 RTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQGQK 65 ++L LD V+R F AA++L +TQSAVSQ IK LE FG PL R PT+ + Sbjct: 32 KSLWVLDVVLRSGSFTAAAERLSVTQSAVSQHIKTLEEEFG-PLFERGARSLTPTQTALR 90 Query: 66 LLALLRQ-VELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP---IRL 121 L LR+ + LEE G E ++++V + WL+P L A+ P IR+ Sbjct: 91 LGPHLRKGFDHLEE---GVEAIRRCCNQITVSVLPSFASAWLIPRLHKFNAEFPDVDIRI 147 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 + E + G + + P +V L A + +F+++ P K G Sbjct: 148 AMSNEVVDFRDVDVDAG-----IRFSSRTFPELIVKDL-AEEEIFLAASPELAKGI--GS 199 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQ---NFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 L +V D D + + ++ + DL P I++ S ++LA G Sbjct: 200 DFRVLKDHVLVDSDAPDSFNWSAWKKAAGHPDLEPRRRI--IISDSSQVIRLALAGQAVA 257 Query: 239 MIPHLQIEKELASGELI---DLTPGLFQRRML 267 ++ + +++EL++G L+ D + + QR +L Sbjct: 258 LVRRILVQEELSAGRLVRLFDFSLKIDQRYLL 289 >UniRef50_Q7WNK1 LysR-family transcriptional regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WNK1_BORBR Length = 293 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/153 (33%), Positives = 80/153 (52%), Gaps = 13/153 (8%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR---PT 60 P + TL+A +AV R RAA++L +T SA+S++++ LE FG LL R PR PT Sbjct: 5 PSFTTLRAFEAVARLGNMTRAAEELSVTHSAISKQVQALEEEFGIQLLRRM--PRAIEPT 62 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 +G +L A L L E + + G LSL+ +A + WL+P LA P Sbjct: 63 PEGARLAATLGTAFGLIEAGINQLRPGP----LSLSCSASIMMRWLIPRLANFKKMRP-D 117 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPS 153 ++L+V + + LR G V+I++ +P+ Sbjct: 118 IDLRVSADHGPVDLLREGI---DVAIRNNVVPT 147 >UniRef50_A3Y562 Transcriptional regulator, LysR family protein n=2 Tax=Proteobacteria RepID=A3Y562_9GAMM Length = 296 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 3/132 (2%) Query: 1 MKR-PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPR 58 MKR P + +QA +A R + ++AA +LC+T A+SQ+IK LE L R R Sbjct: 1 MKRLPPLKAMQAFEAAGRHQSLKKAADELCVTTGAISQQIKLLEAHLEVELFKRLNKSVR 60 Query: 59 PTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 TE G+ L L+ Q L + QT S L++++V A WLLP L P Sbjct: 61 LTEAGRACLPLIEQGFELLGDAAAKAQTYSEQKLITISVAPSFGAKWLLPRLEQFRRKHP 120 Query: 119 IRLNLQVEDETR 130 ++L+++ TR Sbjct: 121 -DIDLRIDASTR 131 >UniRef50_Q28KN5 Transcriptional regulator, LysR family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28KN5_JANSC Length = 293 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 74/280 (26%), Positives = 115/280 (41%), Gaps = 16/280 (5%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPT 60 R ++ L+A V+ F +AA L TQ +S RI LE++ G L+ R R T Sbjct: 4 SRVTFKQLEAFVCVVDTGTFRKAAGILGTTQPNISTRIAALEDVLGTILMHRDAGSIRVT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLL---LSLAVNADSLATWLLPALAPVLADS 117 ++G +LL R++ E +L E G L+ L L V TWL L Sbjct: 64 DKGAELLEAAREILRAGENFL--EIAGRQDLIEDRLRLGVTELVACTWLHDFLRAFKDLY 121 Query: 118 P-IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY 176 P +R+ L V T ++ L +V A+ A P LG Y +V++ Sbjct: 122 PAVRVELDVNLSTEIEKALITHQVDLALQTGPFARPVPGTLPLGDYPYCWVAAPSLTPP- 180 Query: 177 FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSE--AFVQLARQG 234 + +AL PV++ H D + G IV+SS + V +A Sbjct: 181 ----ASFAALFDGPVIS--HGRDTRASRALAEHARAEGVAVNQIVHSSSLTSCVAMAVDA 234 Query: 235 TTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAP 274 ++P L +E +A G L + T G ++ + RF P Sbjct: 235 MGPALLPRLMVEDAIAQGRLSEFTCGWLPDQLQLFARFDP 274 >UniRef50_B5EII3 Transcriptional regulator, LysR family n=1 Tax=Geobacter bemidjiensis Bem RepID=B5EII3_GEOBB Length = 312 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 7/101 (6%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPPRPTEQG 63 D L+ + V+RE+ F +AA L +TQSAVS R+K LE+ FG L+ R+ PT+ G Sbjct: 2 DIEYLRTIITVLREKSFSKAATALNVTQSAVSHRVKFLEDHFGGRLIDRSGTELMPTDMG 61 Query: 64 QKLLALLRQVELLEEEW------LGDEQTGSTPLLLSLAVN 98 ++L ++ LE++ LG ++T S ++ AVN Sbjct: 62 LRVLKKAERIVQLEDDLIEDVANLGGDRTLSIGTTVAFAVN 102 >UniRef50_B7RUK1 LysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RUK1_9GAMM Length = 296 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 73/294 (24%), Positives = 126/294 (42%), Gaps = 14/294 (4%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQ 62 P +L+A + R F A+ +L +T +AVS ++K LEN G L +R T R T Sbjct: 6 PPLNSLRAYECAARHMSFSLASAELNVTPAAVSHQVKLLENHLGVSLFIRLTRKLRLTTA 65 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IRL 121 G++LL + + L E + S +L+L + A WL P L P I L Sbjct: 66 GERLLPEVSEAFLKLREAVNTVDPNSANDVLTLRLGPSLAARWLSPRLHLFWQQFPTIDL 125 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 L + + R ++ A++ + P + L +D+ V S + Sbjct: 126 RLY---HSNSPVNFDREDIDLAITYGAGSWPGVIASPLLDIDFYPVCSPKLVGTESASS- 181 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPP-GSVPCHIVNSSEAFVQLARQGTTCCMI 240 T + LL ++ H DD +A+L+Q+ D+P I++ + +Q A G + Sbjct: 182 TPALLLNHTLLHDAHYDDW-EAWLKQS-DMPQINPRRGIIIDDTNVLIQAALDGQGIALC 239 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMR----KVTDALLDYG 290 L +++ L +G L+ L + M Y + P+ + R +V + LL G Sbjct: 240 STLFVQEHLDAGRLVRLFDTKLKNDMAY-YIVCPKGHLQRPAVKEVKNWLLSQG 292 >UniRef50_B6R8G3 Transcriptional regulator n=2 Tax=Rhodobacteraceae RepID=B6R8G3_9RHOB Length = 299 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 14/208 (6%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRPTEQG 63 D L+ AV F +A + TQSAVS ++K+LE GQP+ V+ R TE G Sbjct: 6 DVDQLRTFLAVAELGSFTKAGDAVHKTQSAVSMQMKKLEERIGQPIFVKDGRNSRITEHG 65 Query: 64 QKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLP-ALAPVLADSP-IRL 121 ++L+ R++ L +E L + L + D A LLP LA +P I L Sbjct: 66 RRLVEYARRMVALNDETLSAFHEPEIAGRIRLGL-PDDYAERLLPQVLAAFNRLNPCINL 124 Query: 122 NLQVEDETRTQERLRRGEV-VGAV-SIQHQALPSCLVDK-----LGALDYLFVSSKPFAE 174 +++ R+++GE+ VG V S ++P +V + +G+ +++ +P Sbjct: 125 DVECSSSNEIGRRIQKGELDVGIVTSGDCTSVPGQIVRREPLQWVGSREHIVYDQRPL-- 182 Query: 175 KYFPNGVTRSALLKAPVVAFDHLDDMHQ 202 G T + +A V A DHL+ HQ Sbjct: 183 -RLAVGPTTCSWRQAGVAALDHLNIQHQ 209 >UniRef50_Q390C5 Transcriptional regulator, LysR family n=7 Tax=Burkholderia RepID=Q390C5_BURS3 Length = 323 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 4/156 (2%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQG 63 D L+ L A R RAA ++ +QSAVSQ++++LE GQPL R PTE G Sbjct: 29 DMDALRTLIAADRLGSLNRAADRIGRSQSAVSQQMRKLETQIGQPLFRRQGRGLVPTEAG 88 Query: 64 QKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IRLN 122 + +L+ R++ L +E +G + + + + D +WL AL P +R++ Sbjct: 89 ELMLSYARRILELNDEAVGAIRGAAIEGAVRFGLPGDFAESWLPVALGQFKRTHPGVRVD 148 Query: 123 LQVEDETRTQERLRRGE--VVGAVSIQHQALPSCLV 156 + V+ +RL GE +V A+ H+A LV Sbjct: 149 IVVDGNGALLDRLDGGELDIVLAMGRGHRADAEHLV 184 >UniRef50_C9NT30 Transcriptional regulator LysR family n=6 Tax=Vibrio RepID=C9NT30_9VIBR Length = 296 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 8/151 (5%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP--PRPTE 61 P + L++ AV + F +AA++L +TQ AVS++I LE M GQPLL R + T Sbjct: 8 PSIKALRSFIAVAHHQSFSKAAEELYVTQGAVSKQIAILEQMVGQPLLERQLNGIELTTA 67 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 Q L ++ +E+++ Q+ + LL++ V + WLLP + P Sbjct: 68 GKQYLPKVIEALEIIQHATASLIQSDTQQELLTIDVTPSFASLWLLPKIEEFRRLHP--- 124 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALP 152 LQV+ TR +L+ + G I + LP Sbjct: 125 QLQVKIRTRENTQLK---LAGESDIALRCLP 152 >UniRef50_B2IKM7 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=B2IKM7_BEII9 Length = 306 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 73/262 (27%), Positives = 121/262 (46%), Gaps = 17/262 (6%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQG 63 P TL+A +A R F A+ +L +TQSAVS +I+ LE ++G L R + T +G Sbjct: 5 PPTPTLRAFEAAARHPTFTAASAELNVTQSAVSHQIQYLEELWGMKLFERGRTLKLTTEG 64 Query: 64 QKLLALLRQVELLEEEWLGD--EQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 L ++RQ + + L Q PL +SL + S WLLP L + A P Sbjct: 65 NALAPIIRQFLVSLDATLAGLRRQRDRHPLRISLTQSFAS--RWLLPRLPSIEASQP--- 119 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQ-HQALPSCLVDKLGALDYLF-VSSKPFAEKY-FP 178 +LQ+ ET T + G+ ++++ S L +L +Y+F V+SK ++ P Sbjct: 120 DLQLWIET-TDHPIGFGQGDADIAVRLGTGQYSGLFAELLLREYIFPVASKQLLDRLGMP 178 Query: 179 NGVTRSALLKAPVV---AFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGT 235 N T + LL+ P++ D + F + D+ + +++ ++ A G Sbjct: 179 N--TPADLLRYPLLFRAGPDLVPKWEYWFERAGVDVSLAHSGTYYPDTNMT-IEAALAGY 235 Query: 236 TCCMIPHLQIEKELASGELIDL 257 ++ +EKEL G LI L Sbjct: 236 GIALVRSGHVEKELRDGLLIRL 257 >UniRef50_A0LD87 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD87_MAGSM Length = 322 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 20/179 (11%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 + + D L A D ++ ERG RA + L ITQ+A+S +++L +F PL V+T Sbjct: 10 LNKFDLNLLVAFDTLMTERGVTRAGRALGITQAAMSNTLRRLRELFDDPLFVKT------ 63 Query: 61 EQGQKLLALLRQVEL-------LEEEWLGDEQTGSTPLLLSLAVN---ADSLATWLLPAL 110 G + R +EL LEE Q G P++ S D + L+P L Sbjct: 64 --GSSMEPTPRAIELSTPVALALEEVRKALNQEGFDPMMASENFRLGMIDYASAMLMPGL 121 Query: 111 APVLADSPIRLNLQVEDETRTQE--RLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFV 167 ++ R +QV D +E L RG V S P +++L +++Y+ V Sbjct: 122 VRHMSQVAPRAKMQVVDVGGDEEVANLERGAVDLVFSRFQWVPPKVCINRLFSMEYVAV 180 >UniRef50_A7K158 Transcriptional regulator LysR family n=4 Tax=Vibrio RepID=A7K158_VIBSE Length = 293 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 2/109 (1%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQ 62 P R L+ AV F +AA LCITQSAVS++I LE + G PL+ R + TE+ Sbjct: 8 PSIRALRTFVAVANYLSFSKAADALCITQSAVSKQIAALEQLVGLPLIQRGSNGIELTEE 67 Query: 63 GQKLL-ALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPAL 110 G++ L + +EL++ Q+ S LL++ V + WL+P + Sbjct: 68 GKRYLPQVTEALELIQNATANLIQSDSKQELLTVDVTPSFASLWLVPHI 116 >UniRef50_Q212R5 Transcriptional regulator, LysR family n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q212R5_RHOPB Length = 300 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 50/155 (32%), Positives = 81/155 (52%), Gaps = 11/155 (7%) Query: 7 RTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPPRPTEQGQK 65 + ++AL V++ F+RAA +L +QSAVS+RI +LE P+ R+ R TEQG+ Sbjct: 6 KQIEALHWVVQLGTFDRAANRLHTSQSAVSKRIMELEAAVAVPIFDRSQRGARLTEQGEH 65 Query: 66 LLALLRQVELLEEEWLGDEQTGSTPL-LLSLAVNADSLATWLLPALAPVLADSPIRLNLQ 124 LLAL + + L++ + + G+ P L L + S TW LP L VL ++ L+++ Sbjct: 66 LLALSQDMLNLQDRIMALKDAGTMPARRLRLGITELSALTW-LPRLISVLRETFPTLDIE 124 Query: 125 VEDETRTQ--ERLRRGEVVGAVSIQHQALPSCLVD 157 + +T RL+ E + +P C VD Sbjct: 125 PDVDTSRDLYARLQEDE------LDLIVIPECFVD 153 >UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Proteobacteria RepID=B9JIM7_AGRRK Length = 306 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 4/155 (2%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRPTEQGQKLL 67 L+A AV+ F RAA+ L I+Q A+++RI++LE G PLL RT PT GQ+++ Sbjct: 10 LRAFQAVVELESFHRAAEALHISQPALTRRIQKLEQSIGAPLLDRTTRHVAPTATGQEMI 69 Query: 68 ALLRQV-ELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVE 126 L+R++ E + + +GS L + A + LP + + L++ Sbjct: 70 PLVRRMLEEFDGSLFAIKDSGSQRRGLITMACVPTAAFYFLPTVIRTFGRDYPHIRLRIR 129 Query: 127 DETRTQ--ERLRRGEVVGAVSIQHQALPSCLVDKL 159 D T + + + RGEV +++ + P + L Sbjct: 130 DLTANEGLQAVARGEVEFGINLMGNSDPDLSFEPL 164 >UniRef50_A5V6Y9 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V6Y9_SPHWW Length = 305 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 6/182 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPL---LVRTVPPR 58 K P L+ + V R F RAA +LC+TQ+AVS +IK LE G PL L RT+ + Sbjct: 4 KLPPLLGLRVFECVARHLSFTRAADELCVTQAAVSHQIKALEEWMGGPLFQRLSRTI--K 61 Query: 59 PTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 TE G+ L+A + Q + + G + L++ V + W++P LA P Sbjct: 62 LTELGESLVAPIGQALDIMADATGRALDRDQNVPLTVGVFDSFSSAWIIPRLARFRERFP 121 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 ++++ + + + L G+ + + + P+ V++L L V S E++ Sbjct: 122 A-VDVRFIAKRQEDDALSSGDADIEIRFGNGSWPNFQVERLLTESVLPVCSPALIERHGA 180 Query: 179 NG 180 G Sbjct: 181 PG 182 >UniRef50_B9M4G8 Transcriptional regulator, LysR family n=4 Tax=Geobacter RepID=B9M4G8_GEOSF Length = 312 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 1/82 (1%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQG 63 D+ L+ L + + F +AA LC+TQSAVS+RI+ LE +GQ LL R+ P +PT G Sbjct: 2 DFTYLKTLLVLAKVGSFSKAALNLCVTQSAVSRRIQALEEHYGQLLLERSGPVLKPTPAG 61 Query: 64 QKLLALLRQVELLEEEWLGDEQ 85 LL +QV +E E L + Q Sbjct: 62 LILLEKAQQVLNIEREILEEFQ 83 >UniRef50_Q39LC6 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q39LC6_BURS3 Length = 341 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 11/258 (4%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP-TEQ 62 P L A +A R F AA++LC+TQSA+S++I+ LE G L VR+ T+ Sbjct: 49 PPLSYLTAFEAAARHESFTSAAEELCVTQSAISRQIRLLEETLGCALFVRSHKAVSLTDG 108 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IRL 121 G+K + L + + ++ ++++ + + WL+P L A+ P I + Sbjct: 109 GRKFQRTVNAALDLLAAAAYELRVQASTSTVTVSADLAIASHWLIPRLPKFRAEHPEIII 168 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 ++ DE +R G + A+ P+C L + V + + + P Sbjct: 169 HVDASDE--DTRNIREGADL-AIQFGDGYWPACNARFLLEEEIFPVCTPAYLARLAPMAH 225 Query: 182 TRSALLKAPVVAFD--HLDDMHQA--FLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 TR LL+A ++ + H D M A F + L +I N+ A +Q A G Sbjct: 226 TRD-LLRATLIHLETRHWDWMDWATWFAHHDIALTEPRQDLYI-NNYPAVLQAAMGGQGI 283 Query: 238 CMIPHLQIEKELASGELI 255 M + LA+G L+ Sbjct: 284 AMGWRYLADDMLATGVLV 301 >UniRef50_A1VWK7 Transcriptional regulator, LysR family n=5 Tax=Comamonadaceae RepID=A1VWK7_POLNA Length = 323 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 50/139 (35%), Positives = 72/139 (51%), Gaps = 4/139 (2%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQGQKLL 67 L+ +A +R R F +AA +LC+TQ AVSQ++K LE+ +PLL+RT PT +GQ L Sbjct: 13 LRCFEATVRYRSFTKAASELCVTQGAVSQQVKHLEDWLQRPLLLRTPRLLVPTPEGQWLA 72 Query: 68 ALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVED 127 +LR+ E L + L +L+ WL P L P +NL+V Sbjct: 73 VVLRESFQAIEGTLIQLRRKQEDLTTALSCAPSFAMGWLTPRLGEFFRAHP-DVNLRVIG 131 Query: 128 ETRT--QERLRRGEVVGAV 144 E +ER+ R +VV AV Sbjct: 132 EFHALDRERMARDDVVAAV 150 >UniRef50_B8IVZ6 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IVZ6_METNO Length = 311 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 75/284 (26%), Positives = 118/284 (41%), Gaps = 34/284 (11%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTE 61 + P ++ L A +A R F RAA +L +TQ A+S++I+QLE L R Sbjct: 7 RMPSFQELTAFEAAGRHGSFTRAADELALTQGAISKQIRQLETTLETVLFERA------- 59 Query: 62 QGQKLL-----ALLRQVELLEEEWLGDEQ----TGSTPLLLSLAVNADSLATWLLPALAP 112 +G+ +L ALL V L ++++ + + + L LAV WL+P L Sbjct: 60 KGRVMLTAAGRALLPTVGRLLQDYVTAAHSVMASAGSEVTLKLAVLPTFATRWLIPRLPR 119 Query: 113 VLADSP-IRLNLQVEDETRTQERLRRGEVVGAVSIQ--HQALPSCLVDKLGALDYLFVSS 169 LA P I +NL E E L V A+ + A C+ +L + VS Sbjct: 120 FLASHPHITINLVTEPEPFD---LMAQSVDAAIHFGAPNWAQADCI--RLCDEAVVAVSG 174 Query: 170 KPFAEKYF---PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLP-PGSVPCHIVNSSE 225 +AE+Y P + R+ LL+ F F P P P + + Sbjct: 175 PAYAERYALNCPADLVRATLLQQA----SRPGLWRDWFAAMGFVHPFPFRGP--LFDQFA 228 Query: 226 AFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYW 269 ++ A+ G ++P +E+ELA G LI + L Y+ Sbjct: 229 MTIEAAKVGIGIALLPSFLVEQELADGSLIQIAAPLLTGSGSYY 272 >UniRef50_B2HXH8 Transcriptional regulator n=10 Tax=Acinetobacter RepID=B2HXH8_ACIBC Length = 303 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 62/261 (23%), Positives = 116/261 (44%), Gaps = 21/261 (8%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQG 63 + + L+A V+ F +AA KL TQ AVSQ+I LEN G +L R++ + T +G Sbjct: 2 NLKNLEAFYWVVTLNSFNKAATKLQTTQPAVSQKITSLENELGFKVLDRSLRQFKLTHKG 61 Query: 64 QKLLALLRQVELLEEEWLGD-----EQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 L + LE + + + TG+ + L V+ + TWL+ + V + P Sbjct: 62 MTLFKYAEKFMRLETDLVAELTENQHLTGT----IRLGVSETIVYTWLVEYIEKVQQEFP 117 Query: 119 -IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPF----A 173 + + + V+ QE +R G++ A + C+ L + F+++ F Sbjct: 118 KVSVEIVVDLTPNLQEGVRTGDLDMAFLLGPTLAFECIEQSLCNFELSFLAAPSFKGGIG 177 Query: 174 EKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQ 233 + F ++ + +L P + + + ++ ++ D P S+ + S ++LA Q Sbjct: 178 QMSFKTLMSHT-ILTYPKITYPY-KELKAKMKEKGID-EPLSITSY---SLATLLRLAEQ 231 Query: 234 GTTCCMIPHLQIEKELASGEL 254 G ++P L KE+ G L Sbjct: 232 GLGIAVVPTLTALKEITDGRL 252 >UniRef50_A1WLY5 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WLY5_VEREI Length = 333 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPT 60 ++PD+ L + AV+ A + L I+Q+AVSQRIKQLE FG LL R T P +PT Sbjct: 8 RQPDWDLLVSWIAVVESGSISEATRLLDISQAAVSQRIKQLETFFGTALLDRSTRPAQPT 67 Query: 61 EQGQKLL 67 GQ+L Sbjct: 68 AAGQRLF 74 >UniRef50_Q123P6 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q123P6_POLSJ Length = 303 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 71/271 (26%), Positives = 106/271 (39%), Gaps = 29/271 (10%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR----- 53 MKR P + L A DAV R RAA LC++ S +S+++ LE+ G PLL + Sbjct: 3 MKRACPTIQELLAFDAVARHGSLTRAAGALCVSVSGISKQLAGLESFVGHPLLEKQGRGV 62 Query: 54 --TVPPRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALA 111 T R E K+ LR +E E + GS +LSLA L WL+P LA Sbjct: 63 QLTTIGR--EYWTKIGPSLRTIETASFE---AKSAGSGAGVLSLASVPTFLTKWLIPRLA 117 Query: 112 PVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKP 171 P + + E E+ A+ P + + +++ V S Sbjct: 118 DFRRLHP-GVTFSFSQHLGSTEP-HPTEIDAAIRYGSAVWPGVESEYIAGREFVCVCSTE 175 Query: 172 F--AEKYFPNGVTRSALL---KAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEA 226 + ++ P V + LL +AP A+ H + H P A Sbjct: 176 HLQSRRWTPKEVLKQTLLHHDQAP-AAWAHWAERHGIDDVHTLAGPR-------FAQYSA 227 Query: 227 FVQLARQGTTCCMIPHLQIEKELASGELIDL 257 +Q G ++P + IE+ELA I L Sbjct: 228 LIQAVLSGLGIGLVPKILIEEELAEKRAIAL 258 >UniRef50_Q1QXA1 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QXA1_CHRSD Length = 324 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 88/325 (27%), Positives = 139/325 (42%), Gaps = 55/325 (16%) Query: 1 MKRPD------YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT 54 M RP+ +R LQ AV R++ + RAA++L +TQ AVS +I+QLE QPL Sbjct: 1 MSRPNLLNRLTFRQLQVFQAVHRQQSYSRAAEQLGLTQPAVSAQIRQLEQALEQPLFKYA 60 Query: 55 -----VPPRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLP- 108 V P + ++ QV L+ E E G+ L+LA A S A +++P Sbjct: 61 GKTLHVLPAADALAASVQSIFGQVSSLQMEL--SELAGTIRGELNLA--AVSTAQYVVPH 116 Query: 109 ALAPVLADSP-IRLNLQVEDETRTQERL--RRGEVVGAVSIQHQA-------LPSCLVDK 158 LA A P +++ L+V + + ERL RR ++V + A L + ++ Sbjct: 117 ILARFRARYPEVQVRLRVCNRGQALERLAERRDDLVIMGMVPEDANLAFMPILDNEMIPV 176 Query: 159 LGALDYLFVSSKPFAE---KYF-----PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFD 210 + L + P E +Y+ P TR+ AF+ + L+ + Sbjct: 177 VWPGHPLLTADAPTLEDFTRYYVLMREPGSGTRT--------AFEDFVARERVSLRHTLE 228 Query: 211 LPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIEKELASGELIDLT-PGLFQRRMLYW 269 L ++EA Q ++P L ++ ELASG L T PG RR W Sbjct: 229 L----------GTNEAIKQGVMAHLGVAVLPRLAVQLELASGLLASPTLPGFPLRR--SW 276 Query: 270 HRFAPESRMMRKVTDALLDYGHKVL 294 P+ R VT+ L + ++L Sbjct: 277 CTVHPKDRYPTPVTELFLRFVRELL 301 >UniRef50_A6BDD9 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BDD9_9FIRM Length = 313 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 8/101 (7%) Query: 15 VIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQGQKLLALLRQV 73 V +ER F +AAQ L I+Q ++S RIK++E + G+PL R T P + TE G+ + ++ Sbjct: 11 VYKERSFTKAAQNLYISQPSLSARIKKIEEIIGEPLFDRSTTPLQLTEVGKVYIEAAEEI 70 Query: 74 ELLE---EEWLGDEQTGSTPLLLSLAVNADSL-ATWLLPAL 110 +E E ++ D T +LAV A +L A +++P+L Sbjct: 71 TQIEQRVENYINDLAGLKTG---NLAVGASTLFAAYVVPSL 108 >UniRef50_C8X447 Transcriptional regulator, LysR family n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X447_DESRD Length = 304 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 66/146 (45%), Gaps = 8/146 (5%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR---PTE 61 D R L+ V ER F +AAQ LC+TQ VS I +LE G L R PR PT Sbjct: 4 DSRRLEVFSFVYSERSFSKAAQALCLTQPTVSAHISELEQYLGTRLFDRL--PRKIVPTA 61 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSL-ATWLLPALAPVLADS--P 118 + L +Q++ L +E ++ L + ++ A +LLP L Sbjct: 62 AARTLYTYTQQIQGLLKEAEASVWALENRIVGQLLLGGSTIPAEYLLPDLLGRFVQRYPE 121 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAV 144 +RL+LQV D E +R GE+ V Sbjct: 122 VRLDLQVGDSRTITEAVRTGELEAGV 147 >UniRef50_B3E6S3 Transcriptional regulator, LysR family n=1 Tax=Geobacter lovleyi SZ RepID=B3E6S3_GEOLS Length = 297 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 1/62 (1%) Query: 21 FERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQGQKLLALLRQVELLEEE 79 F +AA LC+TQSAVS+RIK LE+ +G PLL R+ P TE G+ +L RQ+ +E+E Sbjct: 18 FSKAADALCVTQSAVSRRIKFLEDQYGYPLLDRSGPVLVATEAGKIVLDKARQLLSIEDE 77 Query: 80 WL 81 L Sbjct: 78 LL 79 >UniRef50_A8GDW7 Transcriptional regulator, LysR family n=5 Tax=Enterobacteriaceae RepID=A8GDW7_SERP5 Length = 303 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 78/294 (26%), Positives = 121/294 (41%), Gaps = 28/294 (9%) Query: 15 VIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP-TEQGQKLL----AL 69 V+ E F AA++L +T SAVSQ ++ LE G PLL R+ TE G A+ Sbjct: 7 VVAEGSFAGAARRLGMTPSAVSQHMRSLEKALGVPLLHRSTRRLALTEAGAAFHPGCEAM 66 Query: 70 LRQVELLEEEW--LGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVED 127 L Q + E+ L D G + ++ + LA ALAP+L P +L L+V Sbjct: 67 LFQAQQAEQRLAELRDTLVGELRIATTIGIGGRPLAE----ALAPLLQAHP-KLTLRVLA 121 Query: 128 ETRTQERLRRGEVVGAVSIQHQ-ALPSCLVDKLGALDYLFVSSKPFAEKY----FPNGVT 182 + R + + + + A+ + Q A + + L + ++ + +Y P + Sbjct: 122 DDRIVDMIEQ-RIDIALRVNRQLADANMIAHPLAEWPMVLCAAPRYLSQYGVPEAPQDLV 180 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 + + + HLD HQ Q L G + + +S R G + P Sbjct: 181 QHRWISG-AFSGAHLDLHHQGGQQLKLRLAEGQI---VSDSMTVMRGFTRSGLGISIQPL 236 Query: 243 LQIEKELASGELIDLT----PGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHK 292 +IE EL GELI L P + L R PE R+ L DY H+ Sbjct: 237 YEIEDELQRGELIQLMPEWRPAPLRLHALTLERAMPEKN--RQALRYLRDYFHR 288 >UniRef50_A5KVN8 Transcriptional regulator n=4 Tax=Gammaproteobacteria RepID=A5KVN8_9GAMM Length = 300 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 44/130 (33%), Positives = 65/130 (50%), Gaps = 10/130 (7%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP----PRP 59 P R L A +AV R AA++LC+TQ+AVSQ++K LE L R+ Sbjct: 3 PPLRALVAFEAVARLGSIGAAARELCVTQAAVSQQLKSLETFLDTTLFERSSKGVKLTSA 62 Query: 60 TEQGQKLLA-LLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 + Q ++A L ++L + G+++T +LSL VN WLLP L P Sbjct: 63 AQHYQPIVAGSLAHLKLQTQILFGEKETD----VLSLRVNHTFCHNWLLPRLPSFYQKYP 118 Query: 119 -IRLNLQVED 127 IRL++Q+ D Sbjct: 119 FIRLDIQLVD 128 >UniRef50_C1DLB3 LysR family transcriptional regulator protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DLB3_AZOVD Length = 300 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 71/143 (49%), Gaps = 16/143 (11%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLL------VRTVPPR 58 D +L ALDAV+R GF RAAQ L QSAVS ++++LE G LL VR P Sbjct: 4 DLESLAALDAVVRHGGFGRAAQHLHKVQSAVSYQVRKLEEQLGLALLDREGYRVRLTPAG 63 Query: 59 PT--EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLAD 116 T +G++LL + E L ++ G P LL +A SL +L AL LAD Sbjct: 64 ETLLAEGRRLLGNAARFEALARQF----TDGWEPRLLLVADGILSLDA-VLSAL-KTLAD 117 Query: 117 S--PIRLNLQVEDETRTQERLRR 137 P R+ +++E Q R + Sbjct: 118 EHVPTRVQVKIEFMFGVQYRFEK 140 >UniRef50_B0SWU8 Transcriptional regulator, LysR family n=2 Tax=Caulobacter RepID=B0SWU8_CAUSK Length = 293 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 1/67 (1%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-P 59 M+ P + TL AL+A R R + RAA++L +T AVSQ+I++LE+ G L VR P Sbjct: 3 MRLPPFLTLTALEAAARHRSYSRAARELHVTHGAVSQQIRKLEDELGTRLFVRQGNAMVP 62 Query: 60 TEQGQKL 66 T GQ+L Sbjct: 63 TATGQRL 69 >UniRef50_B1JZS0 Transcriptional regulator, LysR family n=19 Tax=Burkholderiales RepID=B1JZS0_BURCC Length = 306 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 63/266 (23%), Positives = 106/266 (39%), Gaps = 19/266 (7%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQ 62 P +TL+A +A +R + F RAA +L +TQ AVSQ I+ LE G PL R PT Sbjct: 7 PPLQTLRAFEAAVRLQSFTRAADELALTQGAVSQHIRALEAQLGYPLFTRERNGATPTHA 66 Query: 63 GQKLLALLRQ-VELLEEEWLGDEQTGSTPLLLSLAVNADSLAT----WLLPALAPVLADS 117 L +RQ + +LE + P + +N L + WL P L A Sbjct: 67 AHALALQVRQGLSVLERAFEPTLAVRRRPRTCDVTLNVSVLPSVAERWLAPRLPRFSAAH 126 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEK-- 175 P +++ + + +R + A+ P + +KL V+S + + Sbjct: 127 P-HISIVLHPDVALAPLRKRDRIDVALRYGPGTWPGVVAEKLMNETIFPVASPAYRNRDG 185 Query: 176 ---YFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLAR 232 P + R+ LL+ P ++ + L ++ P + A + A Sbjct: 186 VAPRTPADLVRATLLRHPAQPWEPWCQAARLDLTESARAP-------RFTDTNALIDAAL 238 Query: 233 QGTTCCMIPHLQIEKELASGELIDLT 258 +G + IE EL G L+ ++ Sbjct: 239 KGRGVALARRSLIEPELTDGTLVRVS 264 >UniRef50_B7K2F2 Transcriptional regulator, LysR family n=8 Tax=Cyanobacteria RepID=B7K2F2_CYAP8 Length = 324 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 66/246 (26%), Positives = 114/246 (46%), Gaps = 21/246 (8%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLA 68 LQA + F +AA++ +TQS +S++I+ LE G L RT + T G+K+L Sbjct: 6 LQAFLTIAETGNFGQAARQCGVTQSTISRQIQALEGTLGALLFHRTAQAKLTIAGEKMLP 65 Query: 69 LLRQV----ELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IRLNL 123 +++ E + +E + D Q G P L A+++ + +L P L D P ++L + Sbjct: 66 RAKKICQEWETINQE-IADLQGGKQPELCVAAIHS-VCSHYLPPILQQFCHDYPHVQLRV 123 Query: 124 QVEDETRTQERLRRGEVVGAVSIQHQAL---PSCLVDKLGA--LDYLFVSSKPFAEKYFP 178 R + LR G V A+ + ++ L P +V+ L + ++ L + P + Sbjct: 124 TALGSDRALKVLRDGLVDVAIVMNNRFLTTSPEMVVEILYSENIEVLMAADHPLTQF--- 180 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIV---NSSEAFVQLARQGT 235 N + S L P V F M + L Q + L ++ IV N+ +AF + RQG Sbjct: 181 NEIPWSELAHYPQVVFKEGYGMQR--LVQEW-LTTQNISLKIVMELNTLDAFRGIVRQGE 237 Query: 236 TCCMIP 241 ++P Sbjct: 238 IIALLP 243 >UniRef50_A9G1Q3 Transcriptional regulatory protein n=1 Tax=Phaeobacter gallaeciensis BS107 RepID=A9G1Q3_9RHOB Length = 307 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 66/151 (43%), Gaps = 28/151 (18%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT--------- 54 P +L+A +AV R + F +AA ++C+T +AVS ++K LE G LL RT Sbjct: 6 PTLVSLRAFEAVARHKSFRKAADEICVTHAAVSHQVKALETSIGVKLLERTSRSVELTPA 65 Query: 55 ----VPPRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPAL 110 PP E Q ++ R+++ EE P +L + A WL P L Sbjct: 66 GEQYYPPV-REHIQGIIKATRRIQTPEE-----------PDVLLVQSYASFNTMWLQPRL 113 Query: 111 APVLADSP---IRLNLQVEDETRTQERLRRG 138 A L D+P +R+ ED R G Sbjct: 114 ADFLQDNPDTRVRIVSTFEDGDYDMHRFDVG 144 >UniRef50_Q7MFW7 Transcriptional regulator n=2 Tax=Vibrio vulnificus RepID=Q7MFW7_VIBVY Length = 273 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 40/75 (53%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 D ++L L AV E F AA++LC+TQ VSQ +K+LE + G ++ R TE GQ Sbjct: 8 DVKSLNVLCAVYDENSFSMAAERLCLTQPGVSQHVKKLEYLLGSKVIKRGKKIELTEHGQ 67 Query: 65 KLLALLRQVELLEEE 79 L + + EE Sbjct: 68 LLYDFANDLRKMHEE 82 >UniRef50_A4F1D5 Transcriptional activator AmpR n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4F1D5_9RHOB Length = 301 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 74/259 (28%), Positives = 110/259 (42%), Gaps = 19/259 (7%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR---PT 60 P + ++ +A R F RAA +L +TQ+AVS +IKQLE+ GQPL R PR PT Sbjct: 9 PPLQAVRVFEAAARLGSFSRAADELAMTQAAVSYQIKQLEDRAGQPLFRRL--PRGVVPT 66 Query: 61 EQGQKLLALLRQ----VELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLAD 116 G+ A RQ ++ L + W E G+ L ++ A A L P L Sbjct: 67 LAGK---AFQRQAAEALDRLRQGWA--ELLGAEGEDLVISTIASFAAFILGPWLGLFQVA 121 Query: 117 SPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY 176 +P + +V+ R + L GE A+ P D L Y + E++ Sbjct: 122 NP-GITTRVDVNPRPAD-LLAGEASIAIRAGRGDWPGLAADLLIRASYTPYLTPALLEEH 179 Query: 177 FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 P T S LL+ P++ D D + + PP S+ H + S VQ A G Sbjct: 180 GPFN-TPSDLLRVPLI--DASDPAWAIWFRDAGVEPPKSLERHSLGSQLLEVQAALAGQG 236 Query: 237 CCMIPHLQIEKELASGELI 255 C++ + SG L+ Sbjct: 237 ACLLTPAYARGLVKSGALV 255 >UniRef50_Q7W0V6 Putative lysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7W0V6_BORPA Length = 293 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 64/134 (47%), Gaps = 2/134 (1%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPPRPTEQGQKLL 67 L++ V+ F RA++ L +TQS VSQ + +LE G LL R PTE+G++LL Sbjct: 11 LRSFVTVVDTGNFTRASEHLHLTQSTVSQHVIRLEENLGCRLLDRGQRHVLPTEEGERLL 70 Query: 68 ALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IRLNLQVE 126 R + L +E +L L D + L+P LAP+LA P +RL Sbjct: 71 GYARSILRLADEARESVAAAQGNAVLRLGAPEDFMGAALMPVLAPLLARYPLLRLEFDSG 130 Query: 127 DETRTQERLRRGEV 140 + R R GE+ Sbjct: 131 LSHQLLRRYRDGEL 144 >UniRef50_A9KT75 Transcriptional regulator, LysR family n=12 Tax=Clostridiales RepID=A9KT75_CLOPH Length = 296 Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 72/267 (26%), Positives = 124/267 (46%), Gaps = 24/267 (8%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP-TEQG 63 +Y + V + F AA +L I+QSAVSQ +K LE Q L +R+ T++G Sbjct: 4 NYELYKVFYYVAKTLSFSEAAAELFISQSAVSQSVKVLEKRLNQVLFIRSTKRVSLTKEG 63 Query: 64 QKLLALLR-QVELLEEEWLGDEQ-TGSTP---LLLSLAVNADSLATWLLPALAPVLADSP 118 + L + + L+ G+ Q STP + L +A + +L+P L P Sbjct: 64 EMLFKHIEPAINLISR---GENQLLNSTPAGGMQLRIAASDTICRYFLVPYLNNFHKSYP 120 Query: 119 IRLNLQVEDET--RTQERLRRGEV-VGAVSIQHQALPSCL-VDKLGALDYLFVSSKPFAE 174 +++++ + T + E L +V + V+ + AL + L + + +FV +KP A Sbjct: 121 -EVHIRIINGTSLKCAELLETNQVDLIVVNSPNSALNNNLNIQDVTTFRDVFV-AKPDAF 178 Query: 175 KYFPNGVTRSALLKAPVVAFDHLDD----MHQAFLQQNFDLPPGSVPCHIVNSSEAFVQL 230 + +T + L K P++ L +H FLQQ+ DL VP ++S++ + L Sbjct: 179 PLADHKLTLTELQKLPILMLTKLSTTSAFLHNLFLQQSLDL----VPAIELSSNDLLIDL 234 Query: 231 ARQGTTCCMIPHLQIEKELASGELIDL 257 A+ G +P I ++S ELI L Sbjct: 235 AKIGLGIAFVPDFCI-NNVSSPELITL 260 >UniRef50_D2B8Z1 Transcriptional regulator, LysR family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B8Z1_STRRD Length = 328 Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 37/90 (41%), Positives = 48/90 (53%), Gaps = 1/90 (1%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQG 63 D R LQA E F RAA +L +TQ A+S RI++LE G PL VR T+ G Sbjct: 4 DLRQLQAFVTTSEELHFGRAASRLFLTQQALSHRIRRLEATLGGPLFVRGHHVVELTDLG 63 Query: 64 QKLLALLRQVELLEEEWLGDEQTGSTPLLL 93 ++LL L RQ + +E + Q G PL L Sbjct: 64 RRLLPLSRQALAVADEIVAAAQLGRQPLRL 93 >UniRef50_A9HMX3 LysR family transcriptional regulatory protein n=1 Tax=Roseobacter litoralis Och 149 RepID=A9HMX3_9RHOB Length = 300 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 24/52 (46%), Positives = 37/52 (71%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV 55 P+YR ++A + V E F RAA++L + QSA+S+RI+QLE++ G L+ RT Sbjct: 5 PNYRNIEAFNVVAVELSFRRAAERLAMDQSALSRRIRQLEDLLGYQLIRRTT 56 >UniRef50_Q124R6 Transcriptional regulator, LysR family n=3 Tax=Burkholderiales RepID=Q124R6_POLSJ Length = 315 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 11/142 (7%) Query: 1 MKR-PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP 59 M+R P++ L+A ++ R F AA++L +TQSA+S ++++LE+ FG+PL +R R Sbjct: 11 MRRAPNFVLLRAFESAARLESFTLAARELHLTQSAISHQVRELEDYFGRPLFIRR--NRR 68 Query: 60 TE---QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVL-- 114 E +G++LL L +V + E + +L+L A WL P L + Sbjct: 69 VELVAEGRRLLDSLSRVFDVIEAACDEVALAPRAQVLALHCAPSFAAKWLGPRLPEFMQA 128 Query: 115 -ADSPIRLNLQVE--DETRTQE 133 AD IRL E D TR +E Sbjct: 129 HADITIRLTSGAEPVDLTRMRE 150 >UniRef50_B9Z4C8 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z4C8_9NEIS Length = 318 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 72/272 (26%), Positives = 114/272 (41%), Gaps = 28/272 (10%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR 58 M+R P LQ +A +R F RAA++L +TQSAVS++I+ LE+ G+PL R V R Sbjct: 1 MRRTLPSLMALQCFEAAVRHLSFTRAAEELNLTQSAVSRQIRALEDFIGRPLFER-VKQR 59 Query: 59 --PTEQGQKLLALLRQV-ELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLA 115 T G+ A ++ V + E L +L++A+ + WL+P L A Sbjct: 60 LVLTVAGEAYAAAVQDVLDRAEAATLQLMAYSGEGGMLTIAMLPTFGSRWLVPRLGDFAA 119 Query: 116 DSP-IRLNLQVE------DETRTQERLRRGEVVGAVSIQHQAL-----PSCLVDKLGALD 163 P I+LNL + D+ + G + +I H+ + P C LG Sbjct: 120 RYPDIQLNLVTQVRPFDFDKVEADVAIHFGPALWPGAICHRLMGEDIVPVCAPALLGGRP 179 Query: 164 YLFVSSKPFAEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNS 223 +L + A + TR D +H A ++ G + Sbjct: 180 HLDDVREILAYTLLQH-TTRPQAWN---------DWLHAAGIEGLTGNEAGLLSGPRFEH 229 Query: 224 SEAFVQLARQGTTCCMIPHLQIEKELASGELI 255 +Q A G ++PH +E+EL SG L+ Sbjct: 230 FFMVIQAAVAGLGIAVLPHFLVEEELQSGRLV 261 >UniRef50_C1D4D4 Transcriptional regulator, LysR family n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D4D4_LARHH Length = 304 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 49/148 (33%), Positives = 70/148 (47%), Gaps = 9/148 (6%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQG 63 D R L+ AV+R F RAA++L +TQ +S+ I+ LE+ G+PLLVR RPT G Sbjct: 4 DLRALRYFVAVVRLASFTRAAEQLFVTQPTISKMIRSLEDSLGEPLLVRDGRQIRPTAAG 63 Query: 64 QKLLA----LLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP- 118 +L +LR+ L E+ G L L + L ++P LA A P Sbjct: 64 SIVLEHAERMLREASHLHEDLAGLRGLTHGQLCLGIPPMVGPL---VVPLLASFRARHPG 120 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSI 146 IR + + RGEV A+S+ Sbjct: 121 IRPRFTESGGLALEAAVSRGEVDLAISV 148 >UniRef50_C0Z9U4 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z9U4_BREBN Length = 290 Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 58/269 (21%), Positives = 112/269 (41%), Gaps = 10/269 (3%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR---PTE 61 D+ ++ ++ + AA+ +TQ A+SQ + LE G+PL R PR PTE Sbjct: 3 DFEWYRSFISIYKHSSVSEAARTRMMTQPAMSQHLASLEAEVGEPLFTRA--PRKMIPTE 60 Query: 62 QGQKLLA-LLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 +G+ L ++ +E LEE + +T L + + S + LAP + +R Sbjct: 61 RGKALYTQVVPLIEALEETTQTLKTNAATALPV---IRIGSAHEFFREKLAPHIGSFQMR 117 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + + ++ E L +V V Q + P ++ V+ F E F + Sbjct: 118 VIAYLGVASKILEFLLEEKVDLIVMSQKLSAPGVEYIPYMQEEFALVAPPDFGEPTFDDK 177 Query: 181 VTRSALL-KAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 + A L P +++D + + F +++F P + P H+V ++ G + Sbjct: 178 DSFEAWLCSQPWISYDLDLPIIRRFWREHFQKRPQTHPTHVVPDLHGVLKAIEHGAGISL 237 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLY 268 +P ++ L+ ++ + P LY Sbjct: 238 LPTFMLDDHLSRNKVKIMYPSYTVHNDLY 266 >UniRef50_B6GE14 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GE14_9ACTN Length = 338 Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 37/80 (46%), Positives = 46/80 (57%), Gaps = 6/80 (7%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT---VPPRPTE 61 DYRT L+ V R+R F +AA L ITQ AVSQ IKQLE+ +G PL +T + P P Sbjct: 3 DYRTHTFLE-VYRQRSFTQAAASLMITQPAVSQHIKQLESHYGCPLFTKTGRGIEPTPAA 61 Query: 62 Q--GQKLLALLRQVELLEEE 79 Q+LLA+ E L E Sbjct: 62 DVLYQRLLAMENDEERLITE 81 >UniRef50_A4TW42 LysR-family transcriptional regulator n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TW42_9PROT Length = 300 Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 1/76 (1%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQG 63 D L+ ++ GF RA Q+L TQS +SQ+IK+LE+ GQPLL+R + TE G Sbjct: 15 DLDLLRTFVGIVDSGGFTRAGQRLHRTQSTISQQIKRLEDQIGQPLLLRQGRQVQVTEAG 74 Query: 64 QKLLALLRQVELLEEE 79 + LL R++ L++E Sbjct: 75 ETLLGYARRLLALDDE 90 >UniRef50_B9QRV8 LysR substrate binding domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QRV8_9RHOB Length = 298 Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 64/255 (25%), Positives = 106/255 (41%), Gaps = 12/255 (4%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQGQKLL 67 L+A AV R G +AA+++ I+Q A+S RI LE+ G L R T T +G L Sbjct: 11 LRAFLAVARMGGVRKAAEQMNISQPAISARISSLEDYLGTRLFSRETTGVSLTAKGVVLR 70 Query: 68 ALLRQVELLEEEWLGDEQTG-STPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVE 126 Q+ + E GD + S LL L V A+++A LP L + RLN++V Sbjct: 71 DYAEQIMAITERIKGDVMSDDSISSLLRLGV-AETIAQTWLPDFLAALHTTFQRLNIEVT 129 Query: 127 DETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF-PNGVTRSA 185 +T R + ++I + D L PF ++ P + Sbjct: 130 VDTSFNLREMLLDRALDLTILMGPISEYSTDNL--------PLPPFDLGWYRPLDLEEPD 181 Query: 186 LLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQI 245 L + PV+ ++ ++ +Q+ DL S NS ++ G ++P + Sbjct: 182 LSQVPVITYNRSSRPYRELVQKLRDLYGISTQVFPTNSLSTGFEMVASGIGVGILPSVLG 241 Query: 246 EKELASGELIDLTPG 260 + +A G + PG Sbjct: 242 RRLVAEGRIASFDPG 256 >UniRef50_A3VZZ4 Transcriptional regulator, LysR family protein n=4 Tax=Alphaproteobacteria RepID=A3VZZ4_9RHOB Length = 306 Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 71/264 (26%), Positives = 111/264 (42%), Gaps = 23/264 (8%) Query: 1 MKRPDY--RTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP- 57 M RPD L+ + +R+ F RAA +L +TQ+AVS +I +LE+ G L +RT Sbjct: 3 MDRPDIPLNGLRTFEVALRQGSFTRAAIELRVTQAAVSHQIARLEDRLGAKLFLRTSGGL 62 Query: 58 RPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPL-LLSLAVNADSLATWLLPALAPVLAD 116 PT++G+ L +L L D TG + L + V WLLP L+ Sbjct: 63 VPTDEGRDLYPVLEHGLDAIARAL-DRITGHRHIETLKVGVVTTFAVGWLLPRLSEFRRS 121 Query: 117 SPIRLNLQVEDETRTQERLRRGEVV----GAVSIQHQALPSCLVDKLGALDYLFVSSKPF 172 P ++L++ E LR G + GA + L L L + Sbjct: 122 HPT-IDLRISTNNNRVEILREGLDMAIRYGAGTWTGHNAELVLEAPLTPL-----CAPSV 175 Query: 173 AEKY-FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLA 231 AE P+ ++R LL++ D+ + F P + P I +SS A +A Sbjct: 176 AETLSHPDCLSRQVLLRS-----YRSDEWSRWFAAAGASCPALTGP--IFDSSIALADVA 228 Query: 232 RQGTTCCMIPHLQIEKELASGELI 255 G ++P + LA G+L+ Sbjct: 229 SAGAGVALLPVEMFARRLAEGQLV 252 >UniRef50_Q0KCL9 Transcriptional regulator, LysR-family n=2 Tax=Cupriavidus RepID=Q0KCL9_RALEH Length = 302 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 74/277 (26%), Positives = 115/277 (41%), Gaps = 33/277 (11%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFG--------QPL 50 M+R P LQA +A R F AA++L +TQ AVS++++ LE G Q L Sbjct: 1 MRRLCPSLTELQAFEAAARHNSFTVAARELHVTQGAVSKQVRSLEAYLGVELFQRVRQRL 60 Query: 51 LVRTVPPRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPAL 110 ++ T R E ++ L ++E E + + G +L +A A WL+P L Sbjct: 61 MLTTAGERYLE---RIGPSLNELEAATVELMARQGRGG---VLHIASMPTLGAKWLIPRL 114 Query: 111 APVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSK 170 A P + L+ + + ++ A+ P L D + + L V + Sbjct: 115 PQFFARHP-EVKLEFVPHAQGYD-FSEPDLDAAIRFGDGVWPGSLADYMTGREVLPV-CR 171 Query: 171 PFAEKYFPNGV--TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAF- 227 P P GV T +ALL+ P++ H + +A+ L VP S F Sbjct: 172 PGLLASEPGGVAPTPAALLRYPLL---HHTTVPEAWPDWFATL---GVPTREAWSGARFD 225 Query: 228 -----VQLARQGTTCCMIPHLQIEKELASGELIDLTP 259 Q A G +IP IE+ELA+G L+ P Sbjct: 226 QFSLLTQAALSGLGIALIPRCLIEEELATGALVVAHP 262 >UniRef50_A3YH31 Transcriptional regulator, LysR family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YH31_9GAMM Length = 287 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 2/150 (1%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRP 59 MK D L+ AV GF A++ L TQS +SQR+ +LE+M G L+ RT + Sbjct: 1 MKNIDSDLLRTFVAVYECNGFSSASECLNKTQSTISQRLLKLEDMIGCSLMQRTSRNVKL 60 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 T G+ L RQ+ L E + + L + V D +L P L P Sbjct: 61 TPAGKDFLVYARQILKLHAEAIDVAKLAQKNTTLKVGVPDDYAQRFLTPVLRFFRETYPD 120 Query: 120 RL-NLQVEDETRTQERLRRGEVVGAVSIQH 148 + + E R E+ GE+ A+SI+H Sbjct: 121 LIPEVVCETSVRLIEKTMHGELDMALSIKH 150 >UniRef50_A5W5M0 Transcriptional regulator, LysR family n=23 Tax=Proteobacteria RepID=A5W5M0_PSEP1 Length = 313 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 78/295 (26%), Positives = 124/295 (42%), Gaps = 34/295 (11%) Query: 12 LDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP-TEQGQKLLA-- 68 + V R F A+Q L I+ SAV +R+ +LE+ G L R+ T +G L Sbjct: 25 FNRVAETRSFVAASQSLGISASAVGKRVARLESRLGVRLFHRSTRSITLTAEGTMFLERS 84 Query: 69 --LLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVE 126 +L ++E E+E Q TP L V+ + ++PALA +A P QVE Sbjct: 85 RRILAEIEATEQEL---SQASETP-RGRLRVSMPQVTRLVMPALAEFMALYP-----QVE 135 Query: 127 DETRTQERLRR--GEVVGAVSIQHQALPSCLVDK-LGALDYLFVSSKPFAEK----YFPN 179 + +R+ GE V Q + S L K LG + V+S + + P Sbjct: 136 LDLDFSDRMVDIVGEGFDVVMRGGQPVDSRLSAKFLGHFQHRLVASPEYLRERGTPLHPR 195 Query: 180 GVTRSALLKAPVVAFDHLDD--MHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 + L + L+ + Q +Q +D+P S+ C+ V + F L +G TC Sbjct: 196 DLAAHTCLHYRFPSNGKLETWPLRQEHPEQAYDIPI-SMVCNHVETRVCFA-LNHRGITC 253 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRR---MLYWHRFAPESRMMRKVTDALLDY 289 +P + +ELA+G L+ + +RR L W P R M +D+ Sbjct: 254 --LPDFNVGRELANGSLVSVLDDFMERRGSFYLLW----PSGRQMPPKLRVFIDF 302 >UniRef50_A8TZA8 Transcriptional regulator, LysR family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TZA8_9PROT Length = 308 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 53/155 (34%), Positives = 75/155 (48%), Gaps = 12/155 (7%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQG 63 D R L+ AV+ + RAA+ L I+Q AVS+++ LE G+PL +R+ PTE G Sbjct: 2 DLRALRYFQAVVEFGSYSRAAESLRISQPAVSRQVAHLEAELGRPLFMRSGHGVTPTEAG 61 Query: 64 QKLL----ALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVL-ADSP 118 + L A+LRQVE + E G + + L L++ A +L+P L AD P Sbjct: 62 RLLFERSQAILRQVENVTSEIQGADTDLAGTLTLAVPPGA---GHFLMPELVRRFRADCP 118 Query: 119 -IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALP 152 L + E L RG V V+ H ALP Sbjct: 119 GAFLKVVAGYSGYIHEWLIRGRV--DVACLHGALP 151 >UniRef50_A2VZL6 Transcriptional regulator n=1 Tax=Burkholderia cenocepacia PC184 RepID=A2VZL6_9BURK Length = 185 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 6/150 (4%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RP 59 M+ D +TL+ +V R RAA++ I SA+S+RI QLE G PLL R+ P Sbjct: 1 MRDIDLKTLRLFVSVCDHRNIARAAEEAHIEPSAISKRIAQLEADLGAPLLARSRRGVAP 60 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQT---GSTPLLLSLAVNADSLATWLLPALAPVLAD 116 T G LL R V L E +G + G +S+ +A ++A LL +A +++ Sbjct: 61 TSAGMALLEHARTV-LFTLERIGSDIAAFGGGLQGRVSICASASAIAEALLDDIAAFMSE 119 Query: 117 SPIRLNLQVEDETRTQERLRRGEVVGAVSI 146 + N++V+ E R L R G S+ Sbjct: 120 AA-NANIRVDVEERLSNELVRQLREGGASV 148 >UniRef50_Q1LMH3 Transcriptional regulator, LysR family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LMH3_RALME Length = 314 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 79/174 (45%), Gaps = 10/174 (5%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP-- 59 K P R LQA +AV R R F+ AA +L +T +A+S +I+ LE + G+ LL R PRP Sbjct: 3 KLPPLRALQAFEAVARHRSFKAAAAELNVTPTAISHQIRMLEQICGKALLQRR--PRPLR 60 Query: 60 -TEQGQKLLALLRQ-VELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 T G++L LR L E Q G L + NA + + WL+P L P Sbjct: 61 LTVAGERLYPALRSGFALFAEAVATVGQPGVARPLRVTSPNAFA-SRWLVPRL-PAWQGL 118 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKP 171 L++ R + L GE A+ A P LV A D F + P Sbjct: 119 HPEWPLEIIGTDRVLD-LAAGEADVAIRYARCA-PKGLVSTEFARDTFFAVASP 170 >UniRef50_A1SB05 Transcriptional regulator, LysR family n=18 Tax=Shewanella RepID=A1SB05_SHEAM Length = 296 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 3/126 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP-T 60 K P R LQ +A R F RAA++LC+TQSAVS +++ LE GQ L R T Sbjct: 3 KLPPLRALQVFEAAARHLHFSRAAEELCLTQSAVSHQVRGLEQHLGQTLFARRGRELALT 62 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-I 119 +G++L L Q L + L + + L LAV + WL+P L P I Sbjct: 63 PKGEQLF-LAVQSALDGLDSLCRQLNEAESRELRLAVYSSFAVKWLIPRLGDFRRQHPGI 121 Query: 120 RLNLQV 125 +++L++ Sbjct: 122 KIHLEM 127 >UniRef50_P77333 Uncharacterized HTH-type transcriptional regulator ycjZ n=57 Tax=cellular organisms RepID=YCJZ_ECOLI Length = 299 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 76/307 (24%), Positives = 119/307 (38%), Gaps = 64/307 (20%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRP 59 MKR + L A V ER F RAA +L + QSA+SQ ++++E G LL RT P Sbjct: 1 MKREEIADLMAFVVVAEERSFTRAAARLSMAQSALSQIVRRIEERLGLRLLTRTTRSVVP 60 Query: 60 TEQGQKLLALLRQV------ELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPV 113 TE G+ LL++L + + L + +G+ + + + T LLPA+ Sbjct: 61 TEAGEHLLSVLGPMLHDIDSAMASLSDLQNRPSGT----IRITTVEHAAKTILLPAMRTF 116 Query: 114 LADSP---IRLNLQVEDETRTQERLRRGEVVGAV----SIQHQALPSCLVDKLGALDYLF 166 L P I+L + ER G +G I + P + +G+ DY Sbjct: 117 LKSHPEIDIQLTIDYGLTDVVSERFDAGVRLGGEMDKDMIAIRIGPDIPMAIVGSPDY-- 174 Query: 167 VSSKPFAEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCH------- 219 F+ + P V++ L D HQA N LP Sbjct: 175 -----FSRRSVPTSVSQ-------------LID-HQAI---NLYLPTSGTANRWRLIRGG 212 Query: 220 -----------IVNSSEAFVQLARQGTTCCMIPHLQIEKELASGELI----DLTPGLFQR 264 ++N+ + + A G +P+ Q+E+ + +LI TP L Sbjct: 213 REVRVRMEGQLLLNTIDLIIDAAIDGHGLAYLPYDQVERAIKEKKLIRVLDKFTPDLPGY 272 Query: 265 RMLYWHR 271 + Y HR Sbjct: 273 HLYYPHR 279 >UniRef50_Q2BZ62 Transcriptional activator AmpR n=1 Tax=Photobacterium sp. SKA34 RepID=Q2BZ62_9GAMM Length = 302 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 6/135 (4%) Query: 7 RTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP---TEQG 63 +L+A A + + F +AA +L +TQ+AVSQ++K LE+ G L R PR T +G Sbjct: 20 NSLRAFYASAKHQSFTKAANELFVTQTAVSQQVKTLESRLGVTLFNRM--PRGISLTSEG 77 Query: 64 QKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNL 123 KL ++ +V L L + + G T L+++ V WLLP L P ++L Sbjct: 78 VKLYPVVEKVFLELTVNLDNLKFGCTRELVNIGVVGTFALNWLLPRLNDFYHHYP-NIDL 136 Query: 124 QVEDETRTQERLRRG 138 ++ + G Sbjct: 137 RISTNNNIADAFSEG 151 >UniRef50_B1Y7G6 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=B1Y7G6_LEPCP Length = 306 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 1/72 (1%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP- 59 ++ P L+A DAV R +ERAA +L IT SAVS+RI LE++ G LLVR Sbjct: 7 LRFPSIDALRAFDAVARLGSYERAADELAITASAVSKRIVTLEDLLGAALLVRGARALAL 66 Query: 60 TEQGQKLLALLR 71 T G++ LA +R Sbjct: 67 TAHGKEYLAQVR 78 >UniRef50_B7RZF1 Putative lysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZF1_9GAMM Length = 295 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 64/127 (50%), Gaps = 11/127 (8%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 R + L+A AVI E GF RAA+ L I+QSAVSQ + LE+ L+ R R T+ Sbjct: 2 RLENSELRAFRAVIEEGGFRRAAEALHISQSAVSQAVAGLESKVSTSLIRRGKELRLTDA 61 Query: 63 GQKLLALLRQVELLEEEWLGD----EQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 G++L +V E++ L D Q S L L+L+ + + + AP L + Sbjct: 62 GRRLFDHAFEVLTGEQQTLEDIAQLRQGQSETLNLALSASINRFS-------APRLISAF 114 Query: 119 IRLNLQV 125 RLN QV Sbjct: 115 YRLNPQV 121 >UniRef50_Q07TP5 Transcriptional regulator, LysR family n=10 Tax=Rhizobiales RepID=Q07TP5_RHOP5 Length = 305 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 5/78 (6%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR---TVPPRPTE 61 D L++ +V+ GF RA +++ TQS VSQ+IK+LE+ GQ LL R TV PTE Sbjct: 21 DLDLLRSFVSVVDSGGFTRAGERVHRTQSTVSQQIKRLEDDLGQQLLNRDGKTVT--PTE 78 Query: 62 QGQKLLALLRQVELLEEE 79 G++LL+ R++ L EE Sbjct: 79 AGERLLSYARRLLSLAEE 96 >UniRef50_C5CP23 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=C5CP23_VARPS Length = 301 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 1/64 (1%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQG 63 D LQA AV R GF RAA++L +TQSAVS +I++LE + G+PL RT R T G Sbjct: 4 DTGLLQAFTAVHRANGFTRAAEQLHLTQSAVSHQIRRLEELVGRPLFHRTTRRLRLTADG 63 Query: 64 QKLL 67 + L Sbjct: 64 EDFL 67 >UniRef50_Q4KF30 Transcriptional regulator, LysR family n=5 Tax=Proteobacteria RepID=Q4KF30_PSEF5 Length = 286 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP-TEQG 63 D L+ AV+ E+GF RAA KL +TQSAVS +++LE G+PLL RT + T G Sbjct: 3 DALLLRTFVAVVDEQGFSRAALKLHLTQSAVSGHLRRLEQQVGKPLLQRTTRSQQLTADG 62 Query: 64 QKLLALLRQVELLEEE 79 ++L+A R + L + Sbjct: 63 ERLMAYARAILALNRD 78 >UniRef50_Q2SFZ0 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFZ0_HAHCH Length = 305 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 8/125 (6%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTE 61 RP + L+ +AV R + F +A+++LCI S VS+ IK LE F + LLVR + T+ Sbjct: 6 RPSLKALEVFEAVARHQSFCKASEELCINHSGVSKHIKSLELHFEKRLLVRNNKQVQLTD 65 Query: 62 QGQKLLALLRQV-ELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 GQ+L L Q E++ G + + V W+LP L+ + ++ Sbjct: 66 SGQRLWEQLTQAFEIIR----GACGIPHEKNFIEIKVPVTFAIRWMLPRLSRIREET--E 119 Query: 121 LNLQV 125 LNL+V Sbjct: 120 LNLKV 124 >UniRef50_Q0HUM5 Transcriptional regulator, LysR family n=20 Tax=Gammaproteobacteria RepID=Q0HUM5_SHESR Length = 293 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 68/280 (24%), Positives = 116/280 (41%), Gaps = 12/280 (4%) Query: 14 AVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP-TEQGQKLLALLRQ 72 AV F AAQ+L ++ + VS++I LEN G L RT TE+G RQ Sbjct: 12 AVAEAENFTLAAQRLNVSTAHVSRQIGALENRLGTKLFYRTTRKVSLTEEGTIYYRHCRQ 71 Query: 73 VE--LLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVEDETR 130 ++ L E E + GS L+ L +++P L + P + V+ R Sbjct: 72 LQTGLEEAERAITDLKGSPQGLVKLTAPVAYGEKFIMPLLNDFMVQYP-SVEFNVDLTNR 130 Query: 131 TQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF-PNGVTRSALLKA 189 T + + G + A+ + A S + L + + +S + EKY P+ T S L + Sbjct: 131 TLDLIEGGYDL-AIRLGKLADSSLMAKPLSSRTHYMAASPSYVEKYGQPH--TLSELNQH 187 Query: 190 PVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIEKEL 249 + +H + F++ + I NS A A +G +P IE+++ Sbjct: 188 NCLIGNH---NYWRFIENGRERNIKVRGNLICNSGYALRDAALKGIGIVQLPDYYIEEDI 244 Query: 250 ASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDY 289 +G LI + + W + P++R + L+DY Sbjct: 245 HAGRLISFLDAHREAKEGIWALY-PQNRHLSAKVRVLVDY 283 >UniRef50_A1S908 Putative LysR-family transcriptional regulator n=1 Tax=Shewanella amazonensis SB2B RepID=A1S908_SHEAM Length = 307 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 45/118 (38%), Positives = 60/118 (50%), Gaps = 5/118 (4%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQGQKLL 67 L+A AV F RAA +TQS VSQ++K+LE G LL R PT G++LL Sbjct: 23 LRAFVAVADSGSFTRAAAATHLTQSTVSQQLKRLEQQLGCELLSRKGRYAMPTADGERLL 82 Query: 68 ALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IRLNLQ 124 RQ+ L E T + P LL LAV D T L+P L ++ P ++L +Q Sbjct: 83 GYARQILALMAE---AGMTPAQPPLLRLAVAEDFAGTALMPILKKLITRFPSVKLEVQ 137 >UniRef50_D0BX38 Transcriptional regulator n=2 Tax=Acinetobacter sp. RUH2624 RepID=D0BX38_9GAMM Length = 295 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 8/140 (5%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP-TEQGQKLL 67 L+ V++ + F +AA + +TQSAVSQ I LE G LL R+ TE G +L+ Sbjct: 8 LKTFSEVVKTKNFTKAAAYMGVTQSAVSQSINNLEAQLGIKLLNRSTRSLTLTEAGSRLI 67 Query: 68 ALLRQVELLEEEWLGDEQTGSTPLLLS----LAVNADSLATWLLPALAPVLADSPIRLNL 123 L+ Q +E LG EQ S L S ++ +A ++ +L P L ++ P ++L Sbjct: 68 ELVGQN--IENIDLGVEQISSMKDLPSGHVRISADAFTIKYYLWPKLKKLVKQYP-DISL 124 Query: 124 QVEDETRTQERLRRGEVVGA 143 ++ E R + + G G Sbjct: 125 ELTSENRRIDIAKEGYDAGV 144 >UniRef50_P52676 Carbapenem-hydrolyzing beta-lactamase transcriptional activator n=5 Tax=Enterobacteriaceae RepID=NMCR_ENTCL Length = 295 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 58/254 (22%), Positives = 105/254 (41%), Gaps = 33/254 (12%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP---TEQGQK 65 L+A +A R F +A +L ++Q+AVSQ+++ LE M G L R PR T++G Sbjct: 10 LRAFEASARYLNFTKAGLELHVSQAAVSQQVRTLEQMLGVALFTRV--PRGLQLTDEGMH 67 Query: 66 LLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP---IRL- 121 LL + + + + G +L++AV WLLP + L ++P IR+ Sbjct: 68 LLPSITEALQMMSSAMDKFHEGKIKEVLTIAVVGTFAIGWLLPRITAFLNENPWIDIRIL 127 Query: 122 ------NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEK 175 NL E R G + +I P ++ S + + Sbjct: 128 THNNVVNLAAEG-IDASIRFGTGGWINTENILLFQAPHTVL----------CSPETSKKL 176 Query: 176 YFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGT 235 Y P+ + + LL++ ++ + F D P ++ I +S+ + + G Sbjct: 177 YIPSDLKKVCLLRSY-----RKEEWNNWFKAAGID--PWTITGPIFDSTRLMIDAVKLGD 229 Query: 236 TCCMIPHLQIEKEL 249 ++P+ +KEL Sbjct: 230 YAALVPYHMFQKEL 243 >UniRef50_A0P0B3 Transcriptional regulator n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P0B3_9RHOB Length = 309 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 67/260 (25%), Positives = 107/260 (41%), Gaps = 8/260 (3%) Query: 12 LDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQGQKLLALL 70 L+A+ E F RAA L + QSAVS RIK LE G L RT PTE G+ + A Sbjct: 18 LNAIAEEGNFSRAAVALGLEQSAVSHRIKSLEAALGIRLFERTTRRIVPTEAGRIVCAAA 77 Query: 71 RQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVEDETR 130 ++ + + + L T + L+V++ W++PAL A L+L V+ E R Sbjct: 78 KRCQEVWDSALSRIADVRTSRTIRLSVSSSLAMKWVIPALHRAQAAG---LDLVVDVEDR 134 Query: 131 TQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSALLKAP 190 + L GE A+ P + L + V+ + G +ALL Sbjct: 135 LVD-LHAGEAQAAIRYGAGPYPGFHAEALLTAHLVPVARPGLLKGQMTPGGPGAALLADR 193 Query: 191 VVAFDHLD-DMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIEKEL 249 D + F +N+ PP + P ++ +Q A G + L +E ++ Sbjct: 194 AGMSDGTGFSWNDYFKGRNWMEPP-ARPLSSFARADLAIQAAISGMGVALGRTLLVENDI 252 Query: 250 ASGELIDLTPGLFQRRMLYW 269 +G +++ R YW Sbjct: 253 EAG-FLEVVGEPVASRSKYW 271 >UniRef50_Q6F9H5 Putative transcriptional regulator n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6F9H5_ACIAD Length = 309 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 53/253 (20%), Positives = 113/253 (44%), Gaps = 13/253 (5%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQG 63 ++++++ V R F +AA KL TQ AVSQR+ E G LL RT + T++G Sbjct: 2 NFKSIENFYWVARLNSFNKAAVKLNTTQPAVSQRLNSFEQELGVKLLERTSRSLQLTDKG 61 Query: 64 QKLLALLRQVELLEEEWLGD-EQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IRL 121 + + + L ++ L + + + L V + TWL+ + V + P + + Sbjct: 62 KVVYEYAEKYIQLNQDLLKALSENKAIQATIRLGVAETIVHTWLVDFIEQVQLEFPQVTI 121 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP--- 178 ++ + ++ ++ GE+ A ++ C+ L + F+ + F +++ Sbjct: 122 DIVINITPVLKQAVQSGELDMAFLLESGCDFDCIELPLCEFQHSFLIAPRFHKRFMSRQL 181 Query: 179 --NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 ++++ +L P + ++D Q L Q + P ++ + S +++ +G Sbjct: 182 SLKDISQTTILTYPKTTYPYVDLKKQLTLHQFKE--PKTITSY---SLATLIKMTEEGMG 236 Query: 237 CCMIPHLQIEKEL 249 +IPHL + EL Sbjct: 237 IGIIPHLSVIHEL 249 >UniRef50_B5XS26 Transcriptional regulator, LysR family n=6 Tax=Proteobacteria RepID=B5XS26_KLEP3 Length = 301 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/141 (31%), Positives = 66/141 (46%), Gaps = 6/141 (4%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP- 59 MK P L+ +A R ++AA +LC+T SAVSQ+I +LE PL +RT PR Sbjct: 3 MKLPPLNALRCFEAAARLLSLKQAASELCVTASAVSQQIARLEEALNTPLFIRT--PRQL 60 Query: 60 --TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 TE G+ L ++ L Q + P ++L+ + WLLP LA Sbjct: 61 QLTEVGEIYLRAVQPAFLQIAAATQRLQVPAGPEKVTLSCTSGFAIQWLLPRLADFERRY 120 Query: 118 PIRLNLQVEDETRTQERLRRG 138 P ++ +Q+ R + L G Sbjct: 121 P-KIEIQIGTTNRRVDLLSEG 140 >UniRef50_Q218F8 Transcriptional regulator, LysR family n=12 Tax=Rhizobiales RepID=Q218F8_RHOPB Length = 321 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 105/257 (40%), Gaps = 13/257 (5%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPPRPTEQG 63 D++ ++ V+ F AAQKL TQ A+SQRI QLE G LL R PT G Sbjct: 3 DFKAIETFLWVVTLGSFRGAAQKLNTTQPAISQRIAQLERELGVKLLQRDHRSASPTPSG 62 Query: 64 QKLLALLRQVELLEEEWL---GDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-I 119 ++++ ++ L E L GD +L L V + TWL + V P + Sbjct: 63 RQMMVYAEKLIGLRSEMLAVVGDRSAMRG--VLRLGVAETIVHTWLPQLIKSVNRAYPNL 120 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 L ++VE + RL E+ A + P+ L F++S Sbjct: 121 SLEIEVEITPDLRARLMAQEIDLAFLLGPLPDPTVRNRLLCEYPVGFLASPSLG--LGDA 178 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAF--LQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 +T L K P++ F ++ L +LPP + H S + +A +G Sbjct: 179 TLTLRDLAKHPIITFPRKSQPYETIRSLFNRPELPP--IRLHASASLATVIHMAVEGLGI 236 Query: 238 CMIPHLQIEKELASGEL 254 +IP +E EL G L Sbjct: 237 AVIPTDIVEAELGDGRL 253 >UniRef50_Q9RH96 LeuO homolog (Fragment) n=28 Tax=Salmonella enterica RepID=Q9RH96_SALTY Length = 100 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 2/78 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPT 60 K+ DY ++ D VI E RAA+KL +T +A+SQ + +L+N++G+ L +RT P+ Sbjct: 8 KKIDYNLIKVFDTVITEGNATRAARKLDVTPAAISQALLRLQNLYGEELFIRTRKGLVPS 67 Query: 61 EQGQKLLALLRQ-VELLE 77 +G+ L + RQ +E +E Sbjct: 68 SKGKSLHQVFRQAIESIE 85 >UniRef50_C3K0C2 Putative LysR family regulatory protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K0C2_PSEFS Length = 301 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 73/278 (26%), Positives = 118/278 (42%), Gaps = 35/278 (12%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQ 62 P ++L A +A IR AA +L TQ A+SQRI+ LE G L R RPT + Sbjct: 9 PPLKSLVAFEATIRLGSMTAAAVELGTTQPAISQRIRTLEESLGCVLFERNGKLLRPTYE 68 Query: 63 GQKLLALLRQ--------VELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVL 114 GQ++ + L V+ + + + T LS+A N WL+P L + Sbjct: 69 GQQIYSGLASPVSEIKAAVKRMRRHFNKQKPT------LSIAANFGFCYFWLMPKLPALQ 122 Query: 115 ADSP-IRLNLQ---VEDETRTQERLRRGEVVGAVSIQHQALPSCL-VDKLGALDYLF-VS 168 P I+ ++ ++D+ Q+ ++IQ +L +KL + +F V Sbjct: 123 GQFPQIQFKIRPVNLDDDPMLQD--------ADIAIQFGSLDGDFRFEKLLIPETVFPVC 174 Query: 169 SKPFAEKY-FPNGVTRSALLKAPVVAFDHLD----DMHQAFLQQNFDLPPGSVPCHIVNS 223 S AEK G S++ P++ D D D H L PP P N+ Sbjct: 175 SPDLAEKLGLMEGTKISSIEDLPLLHKDSDDSRWLDWHHWCLHAKIT-PPEEAPVFCFNN 233 Query: 224 SEAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGL 261 + A++G + IE+++ +G+LI L P + Sbjct: 234 YPLLLTAAQEGQGIALGWAGLIEEQIKAGKLIALGPSV 271 >UniRef50_A1U7B1 Transcriptional regulator, LysR family n=5 Tax=Gammaproteobacteria RepID=A1U7B1_MARAV Length = 315 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 10/115 (8%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP- 59 M+ P + L +A R F A+++L ITQSAVS +IKQLE G+ L R+ Sbjct: 1 MRLPPLKALPVFEAAARLNSFSAASEELAITQSAVSHQIKQLETYLGERLFWRSGRRVTL 60 Query: 60 TEQGQKLL----ALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPAL 110 T++G++ + L Q+E E+ LG E++ L L+V + WL+P L Sbjct: 61 TDEGRQYFDAIGSALLQIERASEQLLGHEES-----RLRLSVFSSFAVRWLVPRL 110 >UniRef50_Q3BNH3 Transcriptional regulator, LysR family n=11 Tax=Xanthomonadaceae RepID=Q3BNH3_XANC5 Length = 314 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 78/281 (27%), Positives = 123/281 (43%), Gaps = 27/281 (9%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRP 59 M RP LQ + +R RAA + +T SA+S +++ LE G PLL R Sbjct: 1 MSRPPLHALQGFVSAVRLGNLSRAAGAMHLTVSALSHQMRVLEQRLGYPLLQRHARGVTA 60 Query: 60 TEQGQKLL-ALLRQVELLEE--EWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLAD 116 T QGQ+LL + ++ + E E G + + L+L++ + WL+P L LA Sbjct: 61 TPQGQQLLDRIAPHLDAIAEAFEPFGARREDT----LTLSLTPSMASAWLVPRLGEFLAI 116 Query: 117 SP-IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEK 175 P I +NL + R + R+ +V A+ I P + + L D V P A Sbjct: 117 HPTIEINLLSSE--RLVDFERQQQVDAAMRIGAGQWPGVIAEPL--FDEWLV---PMAS- 168 Query: 176 YFPNGVTRSALLKAPVV-AFDHLDDMHQAFLQQNFDLPPGSVP---CHIVNSSEAFVQLA 231 P + R ++AP + + L D A+L+ F G VP +++ SEA + A Sbjct: 169 --PALIARMGGVEAPPLHQWPLLGDPDDAWLRW-FAAFGGDVPRRYVAVLDESEAHHRAA 225 Query: 232 RQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRF 272 G + + LASG+L+ L+ QR W + Sbjct: 226 LDGVGVALGRVTRARLLLASGQLVALS---TQRLKTSWSHY 263 >UniRef50_A1WA39 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=A1WA39_ACISJ Length = 317 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 11/137 (8%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT---- 54 M+R P + L +A R + RAAQ+L +TQSAVS++I LE G L RT Sbjct: 1 MRRHLPSTQALACFEAAARHESYTRAAQELALTQSAVSRQILALEEQLGVQLFRRTRHGV 60 Query: 55 -VPPRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPV 113 + P GQ++ L+ +E + + + G +SLA A WL+P L P+ Sbjct: 61 VLTPAGRHYGQQVARWLQGLERDTLDVMAHQGHGGA---ISLAAVATFATRWLIPRL-PL 116 Query: 114 LADSPIRLNLQVEDETR 130 LA + + +E +TR Sbjct: 117 LAARHPEIVVHIETQTR 133 >UniRef50_A3Y684 Transcriptional Regulator, LysR family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y684_9GAMM Length = 302 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 4/151 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPT 60 K P ++L+ ++V R + F +AA +LC+T SAVS +IKQLE L R T Sbjct: 4 KLPSLKSLRVFESVARNKSFRKAADELCVTHSAVSHQIKQLEQELDVFLFQRNGRSINLT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-- 118 +QG+ L ++ E + ++ S L++ WL+P L A P Sbjct: 64 KQGEFLYPVINDSFDNIAEAVASLKSASKTKTLTIQTYVTFGTVWLIPKLNDFQAKYPDI 123 Query: 119 -IRLNLQVEDETRTQERLRRGEVVGAVSIQH 148 +R+++ D ++ + G ++G + H Sbjct: 124 RVRISISFVDVDFDKDDVDVGIIMGDKAWSH 154 >UniRef50_B7I7G7 Transcriptional regulator, LysR family n=42 Tax=Proteobacteria RepID=B7I7G7_ACIB5 Length = 299 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 82/309 (26%), Positives = 130/309 (42%), Gaps = 55/309 (17%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRPTEQGQKLL 67 L V +ER F RAA KL +QSA+SQ ++ LE+ G LL RT PTE G+ LL Sbjct: 8 LHTFMVVAQERSFTRAAAKLRTSQSAISQTLRNLEDRIGIKLLSRTTRSVAPTEAGEYLL 67 Query: 68 ALLR-QVELLEE-----EWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 LL+ +E +E L ++ G+ L ++ + + + L PA+ V+ P ++ Sbjct: 68 NLLQPAIEEIENGINQISALKNDPAGT----LRISADEYGIQSVLWPAVEKVIQQFP-KI 122 Query: 122 NLQVEDET--------RTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFA 173 ++++ + R LRRG +V I Q V K + L V++K F Sbjct: 123 SVEIISDYGLVDIVQGRFDAGLRRGGLVSKDMIALQ------VSK--PIQMLTVATKEFL 174 Query: 174 EKY----FPNGVTRSAL--LKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAF 227 +Y P + L+ P H + F +Q G VN+ F Sbjct: 175 ARYGHPKHPKDLVEYQCINLRLPT----HGELYRWQFTKQ------GKTQIITVNAKIVF 224 Query: 228 ------VQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLY--WHRFAPESRMM 279 +Q AR G +P ++ + SGEL + L R Y +H + P R Sbjct: 225 TTLSPVLQAARSGVGIAYLPIDMVQPYIESGELEET---LKDWRHSYEPYHLYYPHRREQ 281 Query: 280 RKVTDALLD 288 + + L+D Sbjct: 282 APLLNILID 290 >UniRef50_Q8E8W2 Transcriptional regulator, LysR family n=1 Tax=Shewanella oneidensis RepID=Q8E8W2_SHEON Length = 296 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 8/143 (5%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQG 63 +++ L+ + +ER F++AAQKL + Q ++S+ I++LE++ G LL+R + T G Sbjct: 3 EFKHLKNFQILAKERNFQKAAQKLNLAQPSLSRSIQRLEHLLGTELLLRGSQSTSLTPAG 62 Query: 64 QKLLA----LLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP- 118 + +L+ +L+ VE L +E G + LS+ + T L P L P Sbjct: 63 ELVLSHSQHILQNVETLRKEL--QYMQGKSSGYLSIGASPVPANTILGPILGRFFEQYPD 120 Query: 119 IRLNLQVEDETRTQERLRRGEVV 141 I ++L+V + E+L RGE+ Sbjct: 121 IHIDLEVGTWQQQLEKLLRGELT 143 >UniRef50_Q15X65 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15X65_PSEA6 Length = 297 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 70/284 (24%), Positives = 123/284 (43%), Gaps = 11/284 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP-T 60 K P L+ A F+ AA+++ +TQ+A+SQ IK LE FG L VR T Sbjct: 3 KLPPLNALRYFLAAAETLSFKAAAEQMFVTQAAISQHIKTLEVFFGCQLFVRGHRHVSLT 62 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 + G++LL + ++ +G+ P +L+L V + WL+P L + P Sbjct: 63 KAGERLLPDIATGFSFLDKGVGNLVMDPRPNILNLTVIESLSSRWLVPRLYLFQQEYP-H 121 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 +N++++ R + E+ A+ P KL A D + + P K Sbjct: 122 INVRIQPTNRLLN-FDQNELDLAIRFGIGDYPQLKSRKL-AQDTIHLVCHPGLAKQID-- 177 Query: 181 VTRSALLKAPVVAFDHLDDM--HQAFLQQNFDLPP-GSVPCHIVNSSEAFVQLARQGTTC 237 T ++ + P + D + ++F Q + P G H+ +SS ++ A G Sbjct: 178 -TAQSVSRHPTLTEKSSDILPAWKSFYQLHRINPDVGRNALHVDDSSVTIIEAALAGQGI 236 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRK 281 M+ + I ++L G+L+ L F+ Y+ APE+ R+ Sbjct: 237 AMVRNSLIFEQLEKGQLVKLFNFSFKCHYAYY-LVAPEAHFKRE 279 >UniRef50_B4UKP3 Transcriptional regulator, LysR family n=4 Tax=Anaeromyxobacter RepID=B4UKP3_ANASK Length = 311 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 11/83 (13%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLL----VRTVPPRPT 60 D R L A V+R+ GF RAA L +TQ AVS+ ++ LE+ G PLL RTV PT Sbjct: 2 DLRGLGAFVEVVRQGGFTRAAAALHVTQPAVSKAVRALEDEIGVPLLERGARRTV---PT 58 Query: 61 EQGQKLLA----LLRQVELLEEE 79 E G+ +LA +L V +E+E Sbjct: 59 EAGRAVLARAEGVLAAVRAIEDE 81 >UniRef50_Q1DCG4 Transcriptional regulator, LysR family n=2 Tax=Cystobacterineae RepID=Q1DCG4_MYXXD Length = 302 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 71/268 (26%), Positives = 115/268 (42%), Gaps = 37/268 (13%) Query: 8 TLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT---VPPRPTEQ-- 62 +L+ V+ F RAAQ +TQSAVSQ+I+ LEN + Q LL R+ V P P + Sbjct: 5 SLKMFCDVVETGSFSRAAQLNHVTQSAVSQQIRALENRYEQKLLSRSARQVTPTPAGERL 64 Query: 63 ---GQKLLALLRQVEL-LEEEWLGDEQTGSTPLLLSLAVNA-DSLATWLLPALAPVLADS 117 +++LA +VE + E+ T + + S+ ++ +S+ LL + V Sbjct: 65 FRGCKEILARFAEVEQEIREQATEVAGTTTVSTIYSVGLHELNSVQKQLLKSHPKVNMRL 124 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPS--CLVDKL----GALDYLFVSSKP 171 R N QV D+ ++GA I A P VD L L + P Sbjct: 125 NYRRNDQVYDDV----------ILGAAEIGIVAYPQPRAGVDILPFRDDKLSVVCAPDHP 174 Query: 172 FAEKYFPNGVTRSALLKAPVVAFDHLDDMHQA----FLQQNFDLPPGSVPCHIVNSSEAF 227 FA K V+ +AL P +AFD +A F +++ D+ P +++ E Sbjct: 175 FATK---QKVSLTALSGVPFIAFDREAPTRKALDRLFREKSIDIN----PVMEMDNVETI 227 Query: 228 VQLARQGTTCCMIPHLQIEKELASGELI 255 + G ++P + E+ G L+ Sbjct: 228 KRAVEMGLGVAILPMSTAQGEVKGGSLV 255 >UniRef50_B0KGK4 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=B0KGK4_PSEPG Length = 315 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 7/146 (4%) Query: 8 TLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP---TEQGQ 64 +L R F RAA +LC+T SAVS RI +LE+ L R PR +E G+ Sbjct: 18 SLHVFLVAARHLSFSRAADELCLTASAVSHRINRLEDELALKLFHRM--PRKVSLSEDGE 75 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IRLNL 123 +L A++++ E + L+L V WL+P LA P I+L++ Sbjct: 76 RLFAVMQRTMDELSEAVQARAHAEIAGQLTLYVRPSVAQCWLVPRLAQFTTRYPDIQLDI 135 Query: 124 QVEDETRTQERLRRGEVVGAVSIQHQ 149 +V +E+ R R+ ++V S H Sbjct: 136 RVGNES-IDYRTRKIDLVLCYSDGHH 160 >UniRef50_B2T4N3 Transcriptional regulator, LysR family n=6 Tax=Burkholderia RepID=B2T4N3_BURPP Length = 302 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 58/114 (50%), Gaps = 15/114 (13%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR---PTEQ 62 Y L+A AV GF +AAQ L +TQ AVS +++LE +G L R PR TE Sbjct: 3 YAQLRAFHAVAEHGGFSKAAQALSLTQPAVSDHVRRLEQDYGVKLFERG--PRGVETTEL 60 Query: 63 GQKLLALLRQVELLEE------EWLGDEQTGSTPLLLSLAVNADSLATWLLPAL 110 G +L ++ RQ+ E E G ++GS LSLA +A LA L+ A Sbjct: 61 GLRLFSVTRQMLSCERDARQLLESAGGLESGS----LSLAADAPDLAVALIGAF 110 >UniRef50_B5ZNX7 Transcriptional regulator, LysR family n=4 Tax=Rhizobium RepID=B5ZNX7_RHILW Length = 285 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 9/129 (6%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR---P 59 RP +L+ L+A + F RAA++LC+T +AVS RI+ LE GQPL R R P Sbjct: 2 RPPLESLRILEACVSAGSFARAAERLCLTPAAVSLRIRTLETELGQPLFQRAG--RRVVP 59 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALA--PVLADS 117 T L +R L + Q PL L+ S WL P L+ P + S Sbjct: 60 TAAAAVLAGRIRAALDGIAGALDEFQAAMPPLRLTAPPTFAS--RWLAPRLSRYPSVGTS 117 Query: 118 PIRLNLQVE 126 PI +++ + Sbjct: 118 PIEVDVSAD 126 >UniRef50_A8FU12 Transcriptional regulator n=2 Tax=Gammaproteobacteria RepID=A8FU12_SHESH Length = 304 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 15/208 (7%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP---- 56 + + D L++L A+I ER RAAQK+ ++QSA+S + +L +F L +R Sbjct: 6 LAKVDLNLLKSLRALIEERHVGRAAQKMNVSQSAMSHTLARLRGVFDDSLFIRNAKGLEP 65 Query: 57 -PRPTEQGQKLLALLRQVE-LLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVL 114 R E KL +LR+++ LL + L + + + LA++L A + Sbjct: 66 TARAIELSDKLRFILREIDSLLAPKTL---ELSHIHAHFRIQTHDFILASYLSKAFKRIN 122 Query: 115 ADSP-IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLG--ALDYLFVSSKP 171 ++P I +++++ DET ++L GE+ + QA P + +L L L P Sbjct: 123 HEAPNILIDIKILDET-AYDKLDDGELEMIIGAGLQAKPRFMQKRLTDENLVCLLDKGNP 181 Query: 172 FAEKYFPNGVTRSALLKAPVVAFDHLDD 199 + + P + R +K+ ++ D DD Sbjct: 182 VLKNWTPETIFRYPHIKSSLL--DDRDD 207 >UniRef50_A0KQ86 Regulatory protein, LysR:LysR, substrate-binding n=9 Tax=Gammaproteobacteria RepID=A0KQ86_AERHH Length = 297 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 83/184 (45%), Gaps = 10/184 (5%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP-TEQ 62 P L+ +A R F +AAQ+L +TQSA+SQ+I+ LE + GQPL R T+ Sbjct: 7 PPLNVLRGFEAAARLGSFHQAAQELHLTQSAISQQIRSLEELLGQPLFHRQGRSVALTDA 66 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPV-LADSPIRL 121 GQ LL + V L + + P L L + WLLP L LA + L Sbjct: 67 GQDLLETTQSVLLQLAMGIQRLEQYRKPNQLVLNTSTALARHWLLPRLGAFHLAHPEVDL 126 Query: 122 NLQVEDE-----TRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY 176 L DE +T + R ++ +HQ L L D+L + V ++P AE+ Sbjct: 127 WLFTSDEEPDMAEQTIDLTLRWQLAPQAECRHQLL---LADRLLPVAAPAVLAQPAAERT 183 Query: 177 FPNG 180 +G Sbjct: 184 TLHG 187 >UniRef50_B9JNL4 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JNL4_AGRRK Length = 342 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 31/210 (14%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT--------- 54 P +L+A A R F RAA++L +T +AV Q+I+ LE+ GQPL RT Sbjct: 26 PPLTSLRAFVATARHLNFLRAAEELHVTSAAVGQQIRLLEDYLGQPLFHRTRGQLQLTSA 85 Query: 55 ---VPPRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALA 111 + P T+ +L + Q + E P+ +S+A + S WL+P L Sbjct: 86 GQALVPGLTDAFDAVLGAMTQFAASDHE---------QPIRVSVAPSFAS--KWLIPRLD 134 Query: 112 PVLADSPIRLNLQVEDETRTQ-ERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSK 170 + +P LQV + Q L G+ + A P +VD L + + + S Sbjct: 135 GLRRAAP---GLQVLVDASAQLTDLDSGDADCVIRYGSGAYPGLVVDHLFSEAVIPICSP 191 Query: 171 PFAEKYF----PNGVTRSALLKAPVVAFDH 196 FAE+++ P + LL DH Sbjct: 192 EFAERHWLRNGPKAIEGVPLLHEDGAEHDH 221 >UniRef50_C9P538 Transcriptional regulator n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P538_VIBME Length = 305 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 63/259 (24%), Positives = 105/259 (40%), Gaps = 16/259 (6%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQ 62 P L+A +A R F +AA +L +TQ+AVSQ++K LE+ L +R R T+ Sbjct: 5 PPLNALRAFEASARLGSFTKAADELNVTQAAVSQQVKILEHHLKATLFIREAKGIRLTDA 64 Query: 63 GQKLLALLRQV----ELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 GQ +L QV + E+ G+ + LSL V+ +L L L D P Sbjct: 65 GQSYQPVLSQVFHSLRIGTEDLFGERGNNT----LSLRVSNTFAEHFLAARLPNFLKDYP 120 Query: 119 -IRLNLQVEDETRTQERLRRG-EVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY 176 R+ L +++ +R + E+ + V++L +Y V +P A + Sbjct: 121 RFRVRLYTSPWSQSDQRSQPDIEIYNG----YGDWDGRQVERL-THEYWQVVCRPQAINH 175 Query: 177 FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 + N LL P A + + Q PC +++ +Q R G Sbjct: 176 YGNVTCAKQLLDWPRAAIIGYRETWLDWFSQQGITEIADAPCLEFDTTTLAIQAVRHGDI 235 Query: 237 CCMIPHLQIEKELASGELI 255 + + + LA G L+ Sbjct: 236 ALLTRNFVVADPLAKGSLV 254 >UniRef50_C6B6V3 Transcriptional regulator, LysR family n=3 Tax=Rhizobiales RepID=C6B6V3_RHILS Length = 296 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 43/144 (29%), Positives = 76/144 (52%), Gaps = 5/144 (3%) Query: 8 TLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPPRPTEQGQKL 66 L++ + R F RAAQ+L I+Q+AVS++I++LE + G+ L R T G KL Sbjct: 10 ALRSFEVAGRLESFTRAAQELFISQAAVSRQIRELETLLGEALFERRHRGVHLTASGNKL 69 Query: 67 LALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVE 126 LA+L +E L + ++ L+++V A WL+P L P + +++ ++ Sbjct: 70 LAILTSSFDRIDESLEEIRSRPARAALTISVEPSFAACWLVPRL-PEFRERHPEIDVTID 128 Query: 127 DETRTQERLRRGEVVGAVSIQHQA 150 ++R E R G+ ++I+H A Sbjct: 129 ADSRLVE-FRGGQ--AEIAIRHSA 149 >UniRef50_A1B0X3 Transcriptional regulator, LysR family n=11 Tax=Proteobacteria RepID=A1B0X3_PARDP Length = 288 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 1/70 (1%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQG 63 D R L+A A++ F RAA++L +TQS +SQ++ +LE+ G L+ R P PT QG Sbjct: 3 DPRLLRAFVAIVDSGSFTRAAERLHMTQSTISQQLARLEDAAGHALIDRAARPVLPTPQG 62 Query: 64 QKLLALLRQV 73 ++LL R++ Sbjct: 63 ERLLGYARRI 72 >UniRef50_B1G6L3 Transcriptional regulator, LysR family n=1 Tax=Burkholderia graminis C4D1M RepID=B1G6L3_9BURK Length = 313 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 7/123 (5%) Query: 8 TLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQGQKL 66 L+A +A R+RG+ RAA +L ++ AVS IK LE G L R PTE GQ+L Sbjct: 10 ALRAFEAAFRQRGYSRAADELGLSHGAVSHHIKSLEQSLGVKLFRRDGHVMVPTEAGQRL 69 Query: 67 LALLRQVELLEEEWLGDEQTGSTPL---LLSLAVNADSLATWLLPALAPVLADSP-IRLN 122 L E + G E+ + L +++++V A WL+P LA + +P I +N Sbjct: 70 --ALHVSEGMSRLAQGIEEVRARKLRSRIVTVSVLPAFAARWLIPRLASLHQSNPDIEVN 127 Query: 123 LQV 125 ++ Sbjct: 128 IRA 130 >UniRef50_A1U1I0 Transcriptional regulator, LysR family n=67 Tax=Proteobacteria RepID=A1U1I0_MARAV Length = 336 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 1/74 (1%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RP 59 + R D L LD ++RER +AA L ITQ A+S +++L ++FG PLLVRT Sbjct: 3 ISRVDLNLLVYLDVLLRERNVTKAANHLGITQPAMSNGLRRLRDLFGDPLLVRTSEGMTA 62 Query: 60 TEQGQKLLALLRQV 73 TE+ ++L L+R + Sbjct: 63 TERARELQPLVRGI 76 >UniRef50_A8TTL8 Transcriptional Regulator, LysR family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TTL8_9PROT Length = 294 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 1/105 (0%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQ 62 P TL+A DA R F RAA L +T AVS++I LE G + RT PTE Sbjct: 5 PPLNTLRAFDAAARHGSFSRAADALNVTHGAVSKQIASLEAFLGVTVFERTAHGLEPTEA 64 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLL 107 G L ++ + E + + +TP L+++V A WL+ Sbjct: 65 GAVLAPIVAEALDAMAEGVRRVRRSATPSTLTISVLPSFAAHWLI 109 >UniRef50_B8CHE2 Regulatory protein, LysR:LysR, substrate-binding n=11 Tax=Shewanella RepID=B8CHE2_SHEPW Length = 299 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 2/144 (1%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP-TEQGQKLL 67 L++ AV+ +AA KLC TQS +S +IK+LE GQPLL+R TE G+ LL Sbjct: 7 LESFIAVVECGNLSKAADKLCRTQSTISLQIKKLEESVGQPLLLRDNKGVSLTESGKTLL 66 Query: 68 ALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLAD-SPIRLNLQVE 126 ++ L + L + + ++ L V D + +L L + + + I L + + Sbjct: 67 NYAYKMMQLSSQALDELKECQNREVIRLGVPTDYITRYLGSCLLEFIREFTCIELVIDTD 126 Query: 127 DETRTQERLRRGEVVGAVSIQHQA 150 +RL GE V+ QA Sbjct: 127 VSGNLYKRLHNGEFDVIVATHWQA 150 >UniRef50_B1KL88 Transcriptional regulator, LysR family n=3 Tax=Shewanella RepID=B1KL88_SHEWM Length = 302 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 71/270 (26%), Positives = 118/270 (43%), Gaps = 31/270 (11%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP-TEQGQ 64 YR L V+ + AA +L I++S VSQ +K+LE L+ RT TE GQ Sbjct: 7 YRML-VFANVVEQGSLTGAADELGISRSMVSQHLKKLELRCETQLIERTTRKMALTEDGQ 65 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLL--LSLAVNADSLATWLLPALAPVLADSP-IRL 121 +L ++ LL ++ Q ST L +SL ++ P + P + + Sbjct: 66 QLYHHCAELLLLAKQAEETTQPKSTELRGRVSLLTPICFGEQFITPHIGEFRRQFPKLEI 125 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQH---QALPSCLVDKLGALDYLFVSSKPFAEKY-- 176 NLQ++D R+ R E ++IQ+ Q + + KLG D V++ + +++ Sbjct: 126 NLQLDDR-----RINRLENSVDIAIQNETQQPTDTSFI-KLGQFDEYIVATPEYVQQHGS 179 Query: 177 --FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQN-----FDLPPGSVPCHIVNSSEAFVQ 229 P+ + + + HL Q+FL +N F + C NS Q Sbjct: 180 PLHPDMLLNHQWI---LQTSTHLP---QSFLLENSYGDKFTIKVSPFIC--CNSRHGISQ 231 Query: 230 LARQGTTCCMIPHLQIEKELASGELIDLTP 259 + +QG ++P +E E+A GELI + P Sbjct: 232 MVKQGAGIAILPSYLVEDEIAQGELIHILP 261 >UniRef50_Q11LB7 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11LB7_MESSB Length = 311 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 64/264 (24%), Positives = 117/264 (44%), Gaps = 10/264 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP-TE 61 R + R L+ V R R F AA++L TQ+A+S RI+ LE G LL R T Sbjct: 14 RMNTRFLETFVWVARLRSFSAAAERLNSTQAAISNRIRALEAELGVKLLDRNSRSVTLTR 73 Query: 62 QGQKLLALLRQVELLEEEWLGD-EQTGSTPLLLSLAVNADSLATWLLPALAPVLADS--P 118 +G+ A +++ L ++ D + +S+ + + TW P A ++ ++ Sbjct: 74 EGRVAFAKAQRIVNLASAFVLDVSHPDAIQGSVSIGIIDTIIHTW-FPDFAKLMREAFPM 132 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 ++L+L V+ + ++L+ GE+ A + A +LG D ++V S A ++ Sbjct: 133 LKLSLTVDATPKLYQQLQHGELDLAFGVGSAASDGFYAVELGTFDCVWVGSP--ASRFSS 190 Query: 179 NGVTRSALLKAPVVAFD--HLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 + + + P+V++ + D L +P + + NS + L R+G Sbjct: 191 PPTSIADIEDCPIVSYSVGSVPDQSLRALLGRHAIPLENRVFN-TNSLPTIIHLVREGVG 249 Query: 237 CCMIPHLQIEKELASGELIDLTPG 260 +P I ++S ELI L G Sbjct: 250 IAYLPECIIRPLISSKELILLPIG 273 >UniRef50_Q0K5L3 Transcriptional regulator, LysR-family n=5 Tax=Burkholderiales RepID=Q0K5L3_RALEH Length = 304 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 1/103 (0%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP-TEQGQKLL 67 L A R F RAA +LC+TQ A+S+ I +LE FGQPLL R T+ G+KLL Sbjct: 4 LHAFATAARLGSFTRAADELCVTQGAISRAIARLEAHFGQPLLQRNAHRLVLTDAGRKLL 63 Query: 68 ALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPAL 110 + + E + G+ L+L+V + WL+P L Sbjct: 64 EAVAEPLATIEHASATLRAGNRRHHLTLSVVPTLASVWLVPRL 106 >UniRef50_A8KXK4 Transcriptional regulator, LysR family n=4 Tax=Actinomycetales RepID=A8KXK4_FRASN Length = 293 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 4/153 (2%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLL-VRTVPPRPTEQG 63 D L++L A+ GF RAA+ LCI+QSAVSQ +++LE + G+PL+ + R T G Sbjct: 9 DLTALRSLVAIADCGGFRRAAEALCISQSAVSQHVRRLEKVVGRPLVELVGRGSRFTPDG 68 Query: 64 QKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNA-DSLATWLLPALAPVLADS--PIR 120 + LL+ R++ ++ L G++ L + V + + A L+P + VL + + Sbjct: 69 ELLLSAGRRILATHDDALELLGVGASVLQRLITVGSTEHAADHLIPRVMAVLTEQFPDVE 128 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPS 153 + +++ R L RG + AV + P+ Sbjct: 129 VRFRLDRGARLAHALDRGTLDVAVLVGTGGSPA 161 >UniRef50_D0GM10 Transcriptional regulator, LysR family n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GM10_9FUSO Length = 322 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 64/281 (22%), Positives = 128/281 (45%), Gaps = 19/281 (6%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQG 63 D++ L+ + + F A L I+Q VS IKQLE PL VR+ + T G Sbjct: 22 DFKQLEVFVRLAENKSFSATANDLKISQPTVSLHIKQLEEELDAPLFVRSTRELKITLTG 81 Query: 64 QKLLALLRQV-ELLE-EEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS--PI 119 +K L RQV ELLE +E + + + L V+ S A +++P L + + Sbjct: 82 EK---LYRQVKELLEKKESIVKSFSNKRKKEMILGVSTIS-ANYIMPPLIKKFNEEFPDV 137 Query: 120 RLNLQVEDETRTQERLRRGEV-VGAVSIQHQALPSCLVDKLGALDYLFVS-SKPFAEKYF 177 +N+ ++ T +++ +V +G V ++ +C + +++F++ + + K Sbjct: 138 YVNISEKNSAETIKKVSDYKVDIGIVGMKIHD-ENCEFYPIYKDEFVFIAPNTDYYRKLK 196 Query: 178 PNGVTRSALLKAPVVAFDHLDDM--HQAFLQQNFDLPPGSV-PCHIVNSSEAFVQLARQG 234 + + L+K P + + + + + Q+ ++ P S+ VN E QL +G Sbjct: 197 ESNPSLKELVKEPFILREDGSGVKRNTELIFQSQNVNPASINTVASVNGIEVMKQLVARG 256 Query: 235 TTCCMIPHLQIEKELASGELIDL----TPGLFQRRMLYWHR 271 +I + +E + GEL+++ P +++ L W++ Sbjct: 257 VGTSLISKIAVEAWVKRGELLEIEIKENPHQYRQLYLVWNK 297 >UniRef50_C0N5A5 LysR substrate binding domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N5A5_9GAMM Length = 308 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 8/150 (5%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT---VPP 57 M+ P R LQ L +V+ E+ F AA+K +TQS +S I+ LE + LL RT V P Sbjct: 1 MRLPTLRQLQYLTSVVEEKHFGHAAEKCFVTQSTLSAGIQDLEQLLEVSLLERTNRKVLP 60 Query: 58 RPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNA-DSLATWLLPALAPVLAD 116 P G+++ + +Q+ L E+ + Q+ PL + + +++ +LLP + P + Sbjct: 61 TPI--GEEIASRAQQILSLSEDLVDLAQSEKNPLSGRIQIGVIPTISPFLLPKVLPSVRK 118 Query: 117 SPIRLNLQ-VEDET-RTQERLRRGEVVGAV 144 L + +ED++ R +RL G + AV Sbjct: 119 QLPNLEIVLIEDQSERLLDRLEAGSIDVAV 148 >UniRef50_UPI0001BC7B6D transcriptional regulator, LysR family protein n=1 Tax=Bacteroides sp. D2 RepID=UPI0001BC7B6D Length = 307 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 60/279 (21%), Positives = 107/279 (38%), Gaps = 22/279 (7%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 R D + A+ AA++L I+Q VS + LEN G PL R P E Sbjct: 2 RADLEWFRTFKAIFDTGTMSDAAKELNISQPGVSLHLSSLENYIGHPLFERNTRKMIPNE 61 Query: 62 QGQKLLALLRQV-----ELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLAD 116 + + L RQ+ +L E E +++G + L L V + + +AP +AD Sbjct: 62 RAR---MLYRQICYSLTKLEEVENSVRKRSGKERMTLCLGVYSGLFS----QLIAPHIAD 114 Query: 117 SPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY 176 L +Q D + E L G V ++ + + LG +++ + K Sbjct: 115 LDFNLIVQFGDNDKLSELLESGSVDIIITSTETPIHNISYQVLGTSEFIVAAGKETDISQ 174 Query: 177 F------PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQL 230 F G R L + + + ++ F + NF P +++ ++ Sbjct: 175 FQQLDIENKGQVRKWL--QSQLWYSNEKNIWARFWKLNFKKESDFAPNYVMPDKNTILRC 232 Query: 231 ARQGTTCCMIPHLQIEKELASGELIDLTPGLFQ-RRMLY 268 +G ++PH + G++I L G + + LY Sbjct: 233 LEKGVGLALMPHSVCRDSIERGDIICLWKGYVEMKNTLY 271 >UniRef50_B4EMI8 LysR family regulatory protein n=16 Tax=Burkholderiaceae RepID=B4EMI8_BURCJ Length = 315 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 42/126 (33%), Positives = 64/126 (50%), Gaps = 2/126 (1%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQ 62 P + L A +A +R F +AA +L +TQSA+S++I+QLE G+ L VR R T Sbjct: 19 PPLQCLIAFEAAVRHASFTKAAAELHLTQSAISRQIQQLEEFLGRSLFVREHRSLRLTIA 78 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IRL 121 G++ A + ++ + E D L L++A ++ WL P L A P I+L Sbjct: 79 GEQYAAQVHRLLVQCAEATHDVMKPYGDLELTIACSSGVALLWLTPRLPDFRATYPNIKL 138 Query: 122 NLQVED 127 L V D Sbjct: 139 RLIVRD 144 >UniRef50_Q72A86 Transcriptional regulator, LysR family n=3 Tax=Desulfovibrio vulgaris RepID=Q72A86_DESVH Length = 300 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 + R L+ V+R GF AA+ +C TQS VS+ ++ LE+ +G PLL R+ T G+ Sbjct: 2 NLRVLRCFVEVVRNGGFSAAARVVCATQSTVSKAVRSLEDEYGTPLLDRSNGVALTAAGE 61 Query: 65 ----KLLALLRQVELLEEEWLGDEQT 86 + LA+L + E L+ E LG +Q+ Sbjct: 62 TVYRRALAILAEKEALDAE-LGAQQS 86 >UniRef50_Q5P2Q3 Transcription regulator protein, lysR family n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P2Q3_AZOSE Length = 288 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 28/54 (51%), Positives = 35/54 (64%), Gaps = 1/54 (1%) Query: 20 GFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPPRPTEQGQKLLALLRQ 72 GF +AA +LC+T SAVS RI+QLE M G PL RT RPT G+ L +R+ Sbjct: 21 GFAQAADELCVTPSAVSHRIRQLEAMLGTPLFERTPAGVRPTTVGRLYLESVRE 74 >UniRef50_B8H5P5 Transcriptional regulator, LysR family protein n=4 Tax=Alphaproteobacteria RepID=B8H5P5_CAUCN Length = 301 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 45/124 (36%), Positives = 61/124 (49%), Gaps = 6/124 (4%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR---PTE 61 D ++A V +R F RA ++L +QSAVS ++++LE GQPLL R PR PTE Sbjct: 8 DLDLVRAFLVVCEQRSFTRAGERLGRSQSAVSLQVRRLEEQLGQPLLSRD--PRHVAPTE 65 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 QG L R++ L +E L + L D AT LPA+ A S R+ Sbjct: 66 QGAAFLPQARRLLRLNDEILAGLGADDIEGEVRLGAPED-FATQHLPAVLGSFARSHPRI 124 Query: 122 NLQV 125 L V Sbjct: 125 ALTV 128 >UniRef50_B8IGL0 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IGL0_METNO Length = 300 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 3/140 (2%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPPRPTEQ 62 P + L+AL + +E+AA++L TQSAV++RI++LE G + R R T + Sbjct: 2 PTVKQLEALRWIAVLGSYEKAAERLNATQSAVTKRIQELEASLGTAVFDRNRRGARLTVK 61 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLL-LSLAVNADSLATWLLPALAPVLADSP-IR 120 G+ + AL ++ L ++ + + + P+ L V + TWL +A + A P I Sbjct: 62 GEAVFALAEELLSLRDQIVAVGSSQAAPIRQLRFGVTELTALTWLPAFVAEIRAAYPNIV 121 Query: 121 LNLQVEDETRTQERLRRGEV 140 L +VE + +RLR G V Sbjct: 122 LEPEVEQSSDLFQRLRNGTV 141 >UniRef50_A1WQD6 Transcriptional regulator, LysR family n=12 Tax=cellular organisms RepID=A1WQD6_VEREI Length = 292 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 2/138 (1%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQG 63 D L++ AV+ F AA L TQSA++Q++++L+ G PL V+ R TE+G Sbjct: 5 DLELLRSFAAVVSHHSFAAAAVHLGRTQSAITQQMQRLQEQIGHPLFVKQGRQKRLTERG 64 Query: 64 QKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IRLN 122 ++LL R + L +E L + + G L + D T L LA V +P ++L+ Sbjct: 65 ERLLNYARHMLALNDEALRNLRQGRFEGNLRIGAPHDVAETLLPSLLAEVARTAPLLQLD 124 Query: 123 LQVEDETRTQERLRRGEV 140 + + L GEV Sbjct: 125 IHIGRSPYLMTSLESGEV 142 >UniRef50_A8I530 Transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I530_AZOC5 Length = 320 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 74/265 (27%), Positives = 108/265 (40%), Gaps = 19/265 (7%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLL---VRTVPPRPTE 61 + R L+ V R R F AA KLC TQ+AVS RI LE G L +R V P Sbjct: 2 NIRFLETFVWVARLRSFSSAADKLCTTQAAVSNRIATLERDLGVRLFERDLRNVSLTP-- 59 Query: 62 QGQKLLALLRQ-VELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-I 119 QG++ LA V L EE LG + S +++ + WL + V A P + Sbjct: 60 QGERALAQAETIVRLTEELRLGVSEASSLRGRIAIGTIDSIVYAWLPKLIEAVKATYPDV 119 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 ++L V D + T RL V I L + + +D FA + Sbjct: 120 DIDLTV-DNSLTVSRLLLDRQVNLALIAGPVLAA----ECSNIDLCTYQCHWFAAPHLGL 174 Query: 180 GVTRSALLKA---PVVAFDHLDDMHQAFLQ--QNFDLPPGSVPCHIVNSSE--AFVQLAR 232 R +L+ P+ AF HQ L+ ++ L I+NS+ +LAR Sbjct: 175 HGRRLSLVDIVANPIFAFSKGSQPHQNVLRLMESAGLDANLNLVRILNSNSLATITRLAR 234 Query: 233 QGTTCCMIPHLQIEKELASGELIDL 257 G ++P + + GEL+ L Sbjct: 235 DGMGVAVLPTEVAREMVERGELMQL 259 >UniRef50_Q13LU0 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13LU0_BURXL Length = 307 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 22/50 (44%), Positives = 33/50 (66%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR 53 P L+A ++ R R F +AAQ+L +TQSA+S+ ++ LE +FG PL R Sbjct: 5 PPLAALKAFESAARHRSFTKAAQELFVTQSAISRHVRHLEQLFGIPLFYR 54 >UniRef50_Q1QYB4 Transcriptional regulator, LysR family n=4 Tax=Gammaproteobacteria RepID=Q1QYB4_CHRSD Length = 303 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 2/109 (1%) Query: 1 MKR-PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-R 58 M+R P L+ + R F RAA +LC+T SAVS +++QLE G L VR + Sbjct: 1 MRRLPSLTALRTFECAARHAHFGRAAAELCVTDSAVSHQVRQLEEQLGATLFVRRGRHLQ 60 Query: 59 PTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLL 107 PT Q ++LL L+Q E T L +AV A+ WL+ Sbjct: 61 PTPQARRLLHSLQQAFERVGEACETIAAPDTQAALQVAVPAELAQKWLV 109 >UniRef50_Q13GK2 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13GK2_BURXL Length = 311 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 23/50 (46%), Positives = 34/50 (68%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT 54 D + L DA++RER RAA + +TQSAVSQ++ +L ++F PL +RT Sbjct: 11 DIKLLLVFDALLRERSVSRAADDVGLTQSAVSQKLGRLRDIFSDPLFIRT 60 >UniRef50_C5BJL7 Putative HTH-type transcriptional regulator YcjZ n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BJL7_TERTT Length = 307 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 47/132 (35%), Positives = 65/132 (49%), Gaps = 14/132 (10%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRPTE 61 R D L V + F RAA +L ++QSAVS +++LE G LL RT T+ Sbjct: 9 REDLSDLALFMVVAELQSFTRAATQLELSQSAVSHGVRRLEASVGIKLLNRTSRRVSTTD 68 Query: 62 QGQKLLALLR------QVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLA 115 G+KLLA LR + E LGD G L+ ++ + +L T L P L+ V+ Sbjct: 69 AGEKLLAALRPGLGMINARIEELRLLGDAPRG----LVRISTSKPALRTLLWPKLSAVVR 124 Query: 116 DSP---IRLNLQ 124 D P I LNL+ Sbjct: 125 DYPEIQIELNLE 136 >UniRef50_A9I5L1 Transcriptional regulator, LysR-family n=3 Tax=Proteobacteria RepID=A9I5L1_BORPD Length = 305 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 3/124 (2%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLV-RTVPPRPTEQ 62 P TL+A +AV R F RAA++L +TQ A+S ++++LE+ G PL V RT T + Sbjct: 8 PPLMTLRAFEAVGRHLSFSRAAEELFVTQGAISHQVRKLEHALGGPLFVRRTRAIAFTPR 67 Query: 63 GQKLLALLR-QVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 GQ +R ++LL + + L + + A A WL+P L P + + Sbjct: 68 GQAYYQHVRAALDLLAQASRQARGAHAAAPQLKIGLLASFAARWLVPRL-PAFTQAHPDI 126 Query: 122 NLQV 125 LQ+ Sbjct: 127 GLQL 130 >UniRef50_A5GCN9 Transcriptional regulator, LysR family n=2 Tax=Geobacter uraniireducens Rf4 RepID=A5GCN9_GEOUR Length = 316 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 2/84 (2%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQGQKLL 67 L+ L ++ +AA+ LC++ SA S+RIK LE+ +G PLL R+ P +PT+ G + Sbjct: 6 LKTLIEAVKTGSLSKAAENLCVSPSAASRRIKFLEDQYGYPLLDRSGPVLKPTQAGSLVF 65 Query: 68 ALLRQVELLEEEWL-GDEQTGSTP 90 +++ +E+E L G + G+ P Sbjct: 66 DKAKKLLEIEQELLHGLTEMGNKP 89 >UniRef50_Q7CZE6 Transcriptional regulator, LysR family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7CZE6_AGRT5 Length = 288 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 69/281 (24%), Positives = 111/281 (39%), Gaps = 33/281 (11%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-----TV 55 M P TL+A ++ R+ F AAQ+L +T +AVSQ ++ LE G L R + Sbjct: 1 MTLPPLATLRAFESAARKASFALAAQELGMTATAVSQHVRNLEAWLGVALFERHARGVRL 60 Query: 56 PPRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLA 115 P E G + LRQ+ E + G + + LA +A +L P L A Sbjct: 61 TPAGMEFGNTVSGSLRQIASGAER----IRRGHDRMTVRLASLPSVVAHFLTPRLPRFRA 116 Query: 116 DSP-IRLNLQVEDETRTQE---RLRRGEVVGAVSI---QHQALPSCLVDKLGALDYLFVS 168 P I++++ T + G G ++ + P+C A Y+ S Sbjct: 117 SHPDIQVSISYSGAQHTSAADLTIGHGISFGENAVALFSAETRPTC------APSYI-AS 169 Query: 169 SKPFAEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFV 228 + PF ++ ++LL+A ++ D F + LP G+ P I V Sbjct: 170 AGPFNDE--------ASLLRAELLHDDTETAWRDWFAVGDMSLPYGAGP--IFADFNLLV 219 Query: 229 QLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYW 269 + G + P + KE+A G+L L YW Sbjct: 220 TALKAGQGIGLCPTALLRKEIAEGQLTVLFDRAVDTDKYYW 260 >UniRef50_Q5WH17 LysR family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WH17_BACSK Length = 290 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 38/102 (37%), Positives = 64/102 (62%), Gaps = 7/102 (6%) Query: 12 LDAVIRERGFER-AAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQGQKLLAL 69 L A + + G R A++KL I+Q A+SQR+KQ+E FG+PL +RT PT G++++A Sbjct: 8 LIATLSDEGTIRGASRKLYISQPALSQRLKQIEQRFGEPLFIRTHKSLIPTPVGEEVIAF 67 Query: 70 LRQVELLEEEWLGD---EQTGSTPLLLSLAVNADSLATWLLP 108 ++ + EE+ L D + TG+ LSL +++ +A ++LP Sbjct: 68 AKR-RVQEEKQLQDRLSKLTGTVRGTLSLGISS-VIAQYVLP 107 >UniRef50_A0B3J6 Transcriptional regulator, LysR family n=33 Tax=Burkholderia RepID=A0B3J6_BURCH Length = 298 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 66/270 (24%), Positives = 113/270 (41%), Gaps = 36/270 (13%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQG 63 P+ L A + F AA++L +T SAVS++I LE +FG L VR +G Sbjct: 6 PNVAELHAFATSAKYLNFSYAARELGLTPSAVSRQIANLEALFGVKLFVR--------EG 57 Query: 64 QKLLALLRQVELLEEEWLGD-EQTGSTPL-LLSLAVNADSLAT---------WLLPALAP 112 + LAL R ++ +G + G+ + LLS N+D L WLLP L Sbjct: 58 RG-LALTRAGQVYHARVVGPLREIGNASIELLSARENSDLLTIASVPTFTTKWLLPRLTR 116 Query: 113 VLADSP-IRLNLQVEDETRTQERLRRGEVV-----GAVSIQHQALPSCLVDKLGALDYLF 166 LA +P + L+ + L G+V A+ D LG ++ Sbjct: 117 FLAAAPGVTLSF--------RRHLAPGDVFPFGLDAAIRYGDGGWEGVRSDYLGGRTFVP 168 Query: 167 VSSKPFAEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEA 226 V S+ FA+++ + +A AP + + + A+ +++ ++ Sbjct: 169 VCSREFADRHALHVPADAA--AAPRLVHEQAEIAWSAWAERHRATQMNALAGPRFEQYSV 226 Query: 227 FVQLARQGTTCCMIPHLQIEKELASGELID 256 +Q A+ G ++P I LA+G L++ Sbjct: 227 LIQAAQAGLGIALVPRFLILDNLAAGTLVE 256 >UniRef50_UPI000178A79D transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A79D Length = 291 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 59/261 (22%), Positives = 115/261 (44%), Gaps = 29/261 (11%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQGQKLL 67 LQ V + F +AA +L QS+V+ +I++LE +G L R R T+ G++L Sbjct: 6 LQTFREVAVRKSFTKAADELGYAQSSVTTQIQKLEKEYGVKLFERYGRGLRLTKSGEELF 65 Query: 68 AL-LRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVL--ADSPIRLNLQ 124 ++ ++L ++ ++ T +LS+ DSLA + LP++ L + + LQ Sbjct: 66 KYAVQMLDLFQQS--KEKLTKQGGGILSIG-TIDSLAAYFLPSVLHRLRQEHEDLAIRLQ 122 Query: 125 VEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRS 184 + E ++R GE + ++++ + +L+++ + +P P+ Sbjct: 123 TDREDSIVSKVREGEYDLGLILENKPEDT-------SLNWISIREEPLHLIAHPD----H 171 Query: 185 ALLKAPVVAFDHLDDMHQAFLQQNFD--------LPPGSVPCHI---VNSSEAFVQLARQ 233 L + PV+ +HL D + + L P I + + EA + Sbjct: 172 PLHRLPVIELEHLADYEWIMTEDTCNYRIMLEKVLRASGAPVRIGLELGNPEAIKRYIMS 231 Query: 234 GTTCCMIPHLQIEKELASGEL 254 GT ++P + E+E+ GEL Sbjct: 232 GTGISLLPRMVAEEEIKRGEL 252 >UniRef50_A9BYU9 Transcriptional regulator, LysR family n=22 Tax=Proteobacteria RepID=A9BYU9_DELAS Length = 306 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 46/140 (32%), Positives = 74/140 (52%), Gaps = 7/140 (5%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTE--- 61 D L++ AV F RAAQ + +TQS VSQ+I++LE G LL R+ R E Sbjct: 21 DPTLLRSFCAVAETGSFTRAAQGVHLTQSTVSQQIRRLEEQMGCTLLDRS--GRHVECTL 78 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IR 120 +G++LLA +++ L +E + ++ G+T +L + V D L+PAL + P +R Sbjct: 79 EGERLLAYAQRILALMDEAV-EQLAGATEAVLRIGVPEDFAGHALMPALGALARSQPQLR 137 Query: 121 LNLQVEDETRTQERLRRGEV 140 L L ++L+ GE+ Sbjct: 138 LELTSGLSQAIWQQLQAGEL 157 >UniRef50_C2CVZ4 LysR family transcriptional regulator (Fragment) n=1 Tax=Gardnerella vaginalis ATCC 14019 RepID=C2CVZ4_GARVA Length = 191 Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 29/186 (15%) Query: 2 KRPDYRTLQALDAVI---RERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR 58 K+ DY +++L+ +I +E F +AA+++ ++Q +S +IK+LE++ G L+ RT P + Sbjct: 16 KKDDYVNIKSLEYLIAFAKEESFTKAAERMHVSQPTLSTQIKKLEDLLGVCLIERT-PGK 74 Query: 59 P--TEQGQKLLALLRQVEL-----------LEEEWLGDEQTGSTPLLLSLAVNADSLATW 105 T G++++ +++ LE+ W G P +L + Sbjct: 75 QILTPAGREVVYYAKRIHADVSSIYQAARRLEDPWSSTIVLGVFP----------TLCPY 124 Query: 106 LLPALAPVLADSPIRLNLQVEDETRTQ--ERLRRGEVVGAVSIQHQALPSCLVDKLGALD 163 LLP + PVL N++ +E E L G++ GA+ + S V + D Sbjct: 125 LLPRIMPVLRKVKPNFNIRFVEEKSASLVEMLHSGQIDGAILSEQLNESSLKVKHIFDED 184 Query: 164 YLFVSS 169 +L +S Sbjct: 185 FLLAAS 190 >UniRef50_C0ZI27 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI27_BREBN Length = 307 Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 74/286 (25%), Positives = 120/286 (41%), Gaps = 55/286 (19%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP-TEQG 63 + R L+ A+ E F RA++KLC +QS +SQ+IK LEN G PL R TE G Sbjct: 2 ELRQLEYFMAICEEMHFSRASEKLCTSQSNLSQQIKFLENELGVPLFDRLGKRITLTEAG 61 Query: 64 QKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI---- 119 + LL R V + +L +LP A +L D+ + Sbjct: 62 KVLLEQSRHV-------FSHIDYAREAIAAMKNNEGGTLTIGVLPGDADLLFDALLVEFH 114 Query: 120 ----RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEK 175 + +L V + TR E++ GE+ V++ LP D+ ++ P + Sbjct: 115 RLYPKTSLSVIESTRIVEQITSGEIDLGVTV----LPE--PDER-------ITVIPLFHE 161 Query: 176 YFPNGVTRSA-LLKAPVVAFDHLDDM--------HQA-------FLQQNFDLPPGSVPCH 219 F V R+ L K + F L ++ HQA +Q+ F L P H Sbjct: 162 EFALAVHRAHPLAKEKAIKFGQLQEVKMVMFPPDHQARQLINRYCIQEGFRLQP-----H 216 Query: 220 IVNSS-EAFVQLARQGTTCCMIPHLQIEK----ELASGELIDLTPG 260 I ++ ++ + L ++G C++P L ++ E+A L+ TP Sbjct: 217 IETTTLQSQLSLVKKGIGGCILPSLLLQNVNDDEIAIINLLHPTPS 262 >UniRef50_Q2T3A1 Transcriptional regulator, LysR family n=12 Tax=Proteobacteria RepID=Q2T3A1_BURTA Length = 375 Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 83/178 (46%), Gaps = 14/178 (7%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTE 61 K + + L AV+ F AA++L T+S VS R++QLE G LL R P + TE Sbjct: 62 KMNKFSDMSTLVAVVESGSFSEAARRLGTTKSIVSHRVQQLEKRLGCALLTRGRPLQLTE 121 Query: 62 QGQKLLA----LLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 G+ LL+++E +E+E E S L L V AT++ LAP+LA Sbjct: 122 PGRNFFERSRILLQELERMEDEV--QEAGASLHGTLRLTVP----ATFVTHRLAPLLARF 175 Query: 118 PIR---LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPF 172 + L ++VE E R L+ G A+ I A + + L A +L +S + Sbjct: 176 AAKYQALCVEVEAEDRLSN-LQDGHFDIAIRIGRLADSNLVARPLCANHHLICASPAY 232 >UniRef50_B8IHA3 Transcriptional regulator, LysR family n=2 Tax=Methylobacterium RepID=B8IHA3_METNO Length = 283 Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQGQKLL 67 L+ L AV+R R F RAA++L + QS VSQ +++LE G+ L+ R T PT +G+ +L Sbjct: 10 LRTLTAVVRSRSFSRAAEQLSLRQSTVSQHVQRLEAQLGRRLIARDTHSVAPTPEGEAVL 69 Query: 68 ALLRQV 73 R V Sbjct: 70 GFARTV 75 >UniRef50_Q2RXK6 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q2RXK6_RHORT Length = 320 Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 78/308 (25%), Positives = 126/308 (40%), Gaps = 42/308 (13%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP--TE 61 P R L+ L V R F RAA+ +TQS +S +++LE + G L+ R + T Sbjct: 5 PTLRQLRYLVTVSETRHFGRAAEICAVTQSTLSAGVQELEGLLGTRLIERRSRRQVVFTP 64 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNA-DSLATWLLPALAPVL--ADSP 118 G++++ R V E + Q GS PL+ L + ++ ++LP L P L A Sbjct: 65 LGEEIVERARAVLADAEALVDAAQAGSLPLVGDLHLGVIPTIGPYVLPRLVPALREAYGG 124 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 +RL L+ E L G + A+ ALP + D L + ++++ Sbjct: 125 LRLFLREEQSANLLSLLNAGRIDAAL----MALPYAVGD----LPRVELATEEVVLAMPE 176 Query: 179 NGVTRSALLKAPVVAFD-----HLDDMHQAFLQQNFDLPPGSV-PCHIVNS--SEAF--- 227 N P+ AFD L+ L+ L ++ CH+ S +EAF Sbjct: 177 N---------HPLAAFDDIAVEKLESETMLMLEDGHCLREHAMEACHLTRSRGNEAFQAT 227 Query: 228 -----VQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRR----MLYWHRFAPESRM 278 VQ+ G ++P + + E G + + P R L W +P SR Sbjct: 228 SLSTLVQMVAGGVGVTLMPSIAVPVEARPGSGVVVRPITGARAARTLALLWRPASPRSRD 287 Query: 279 MRKVTDAL 286 R + DA+ Sbjct: 288 YRLLADAI 295 >UniRef50_D1XET8 Transcriptional regulator, LysR family n=1 Tax=Streptomyces sp. ACTE RepID=D1XET8_9ACTO Length = 307 Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 19/149 (12%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQGQKLL 67 L+AL AV+ GF RAA+ L ITQ AVSQ+I+QL + +P+ T R + QG++LL Sbjct: 10 LRALVAVVEHGGFRRAAEVLHITQPAVSQQIRQLSGLIKRPVFASTGRDMRLSPQGEELL 69 Query: 68 ALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNL---Q 124 R++ L +E + +LLS+ V + LA VL + R+N Q Sbjct: 70 EYARRMVALNDEAVARFVPEVGQVLLSVGVTSQ---------LAEVLPEFLRRINRELPQ 120 Query: 125 VEDETRT------QERLRRGEVVGAVSIQ 147 V+ RT E+LR G++ A+ +Q Sbjct: 121 VQLRVRTGASEALAEQLRTGQLDAALLLQ 149 >UniRef50_A3UKM0 Probable transcriptional regulator n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UKM0_9RHOB Length = 295 Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 83/307 (27%), Positives = 128/307 (41%), Gaps = 36/307 (11%) Query: 8 TLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQGQKL 66 TL+ V+ GF AA+ L ++ ++VS+ IK+LE G L+VRT T+ GQ Sbjct: 6 TLEIFRKVVDRNGFSAAARDLGLSNASVSKAIKELEAQLGAQLIVRTTRSLHLTDVGQAY 65 Query: 67 LALLRQV--ELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IRLNL 123 + V L + + L +T S L LA L AL P I L+L Sbjct: 66 YQRVGGVLDALDDADELVRSETASPRGRLRLAAPLSLGLVALQEALLSFCKTYPDILLDL 125 Query: 124 QVEDETRTQERLRRGEVVGA---VSIQHQALP--SCLVDKLGALDYLFVSSKPFAEKYFP 178 + D +VVG +I+ LP S KL +LD + V+S P Sbjct: 126 HMSDAVV--------DVVGEGFDAAIRGGNLPDSSLKARKLMSLDRVVVAS--------P 169 Query: 179 NGVTRSALLKAP-------VVAFDHLDDMHQAFLQQNFDLPPGSV-PCHIVNSSEAFVQL 230 + + RS LK P + + + L+++ + + P VNSS A Sbjct: 170 DYLARSVELKRPEDLSRHDALIYSGAEHSETCILKRDGEAVQVQLRPRLRVNSSIAVKSA 229 Query: 231 ARQGTTCCMIPHLQIEKELASGELIDLTPGL-FQRRMLYWHRFAPESRMMRKVTDALLDY 289 A +G + PH+ + + L G L+ L P + R LY PE R + + LLD+ Sbjct: 230 AVEGLGIAVTPHVYVRQALEEGALVQLLPDWSIEGRALYV--VYPEQREVSRKLRVLLDH 287 Query: 290 GHKVLRQ 296 + R+ Sbjct: 288 LAETFRE 294 >UniRef50_A1WKP4 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WKP4_VEREI Length = 318 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 49/146 (33%), Positives = 72/146 (49%), Gaps = 22/146 (15%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP-----TEQG 63 L++ +A R+ F AA +LC+TQ+A+S +I+ LE G L R RP T G Sbjct: 18 LRSFEAAARQLSFTNAAHELCVTQAAISHQIRALEQSLGTQLFER----RPRQVRLTVAG 73 Query: 64 QKLLALLRQ----VELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP- 118 ++LLA+L +E + LG+ Q + L LAV + WL+P L + P Sbjct: 74 EQLLAVLSDSFDGIERVLAS-LGNPQVST----LQLAVTPTFSSKWLMPRLPRFIDRHPD 128 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAV 144 I L+L T + L RG+V AV Sbjct: 129 IELHLH---HTAQADVLTRGQVDMAV 151 >UniRef50_C6BG32 Transcriptional regulator, LysR family n=1 Tax=Ralstonia pickettii 12D RepID=C6BG32_RALP1 Length = 302 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 61/126 (48%), Gaps = 5/126 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTE 61 K P R+LQA +A R F RAA +L IT+SAVS++I LE G L VR Sbjct: 5 KIPSLRSLQAFEAAARLENFTRAANELSITESAVSRQIISLEQNLGVTLFVRQNKRVHLN 64 Query: 62 QGQKLLA-LLRQV--ELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLA-DS 117 Q +L A +R+ L WL + + L +AV + + WL+P + + Sbjct: 65 QTGRLYADHVRETLSALDSNAWLLSSRVNNVS-NLDIAVLPEFASNWLIPRMRDFYSYHE 123 Query: 118 PIRLNL 123 +R+N+ Sbjct: 124 NVRINM 129 >UniRef50_Q71X77 Transcriptional regulator, LysR family n=18 Tax=Listeria RepID=Q71X77_LISMF Length = 299 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 7/145 (4%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 ++RT++ V+ F+RAA+ L +Q +S RIKQLE L R + T G+ Sbjct: 2 EFRTIKTFYTVVNTGSFQRAAEVLNYSQPTISMRIKQLEQDLDVQLFERGKTLKLTHAGR 61 Query: 65 KLLA----LLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-I 119 L+ Q E+L+ D + G+ L+ + ++ S + L LAD P + Sbjct: 62 LFYERAGQLIAQYEVLDHTIF-DLKNGNAG-LIKVGISEPSASLVFPKILKTFLADFPKL 119 Query: 120 RLNLQVEDETRTQERLRRGEVVGAV 144 +N+ V+D ++L GE+ A+ Sbjct: 120 MVNVSVDDANTCSQKLIDGEIDFAI 144 >UniRef50_Q2BQI7 Hypothetical D-serine deaminase activator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQI7_9GAMM Length = 310 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 107/267 (40%), Gaps = 23/267 (8%) Query: 8 TLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQGQKL 66 LQ + + F RAA +L +TQ A+SQRI++LE G L +R + T +G++L Sbjct: 16 NLQCFSSAAKHLSFTRAADELNLTQGAISQRIRKLEEQLGFALFLRYNRRLQLTAEGERL 75 Query: 67 LALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVE 126 L + + D T LSL+ + WLL LA P ++ ++E Sbjct: 76 LIQTNNSLTELDNLIRDIHTQGLAGELSLSTPPSFASEWLLEKLADFSQHFP-QIFFRME 134 Query: 127 DETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY----FPNGVT 182 +R + ++ A+ P + L + V + FA+KY P + Sbjct: 135 THSRLVDFFSE-QIDLAIYYGQGEYPGLVCWHLMDEQLIPVCTPEFAKKYDLWSRPEQLN 193 Query: 183 RSALLK--------APVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQG 234 LL P + + + N +L G H + SE V+ A+ G Sbjct: 194 HCHLLHDAQAWPEAGPYSEWSYWAERQSL----NLELKQG----HCFDKSEHAVKAAKAG 245 Query: 235 TTCCMIPHLQIEKELASGELIDLTPGL 261 + IEK L +GELI+ GL Sbjct: 246 LGVAIGRKQLIEKYLNNGELINPFDGL 272 >UniRef50_B2TBR7 Transcriptional regulator, LysR family n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2TBR7_BURPP Length = 297 Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 28/54 (51%), Positives = 35/54 (64%), Gaps = 1/54 (1%) Query: 1 MKR-PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR 53 M+R P + L A DA R F RAAQ+L +TQSA+S +I+QLE GQPL R Sbjct: 1 MRRLPPLQALLAFDAAARLGSFTRAAQELALTQSAISHQIQQLEEWTGQPLFRR 54 >UniRef50_Q74DP8 Transcriptional regulator, LysR family n=1 Tax=Geobacter sulfurreducens RepID=Q74DP8_GEOSL Length = 335 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 25/45 (55%), Positives = 31/45 (68%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR 53 + L AV+ F RAA++LCITQSAVSQRIK LE +G L+ R Sbjct: 6 FKTLLAVVETGSFSRAAERLCITQSAVSQRIKLLEGRYGYTLIDR 50 >UniRef50_D1TCI7 LysR family transcriptional regulator n=2 Tax=Burkholderia RepID=D1TCI7_9BURK Length = 329 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 15/162 (9%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 +R D L A++ ER RAAQ+L + Q AVS +K+L FG L VRT P+ Sbjct: 22 FRRFDLNLLVTFRALLEERSVTRAAQRLLLGQPAVSGALKRLRETFGDELFVRT--PQGM 79 Query: 61 EQGQKLLALLRQVE--------LLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAP 112 + L L RQ+E L + + D + + L +DSL L+P + Sbjct: 80 TPTPRALELARQIEPFLQSLHQALTQPSVFDPASAQRVFRIGL---SDSLELLLMPEIMA 136 Query: 113 VLADSP--IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALP 152 LA + ++L + D TR L G + AV + + +P Sbjct: 137 RLAAAAPGVKLIARSTDSTRAAAMLDDGAIELAVGVFRECVP 178 >UniRef50_A9AQ57 LysR family transcriptional regulator n=51 Tax=Burkholderia RepID=A9AQ57_BURM1 Length = 317 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 3/126 (2%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 K P+ L A +A R F AA++L +T+SAVS++I LE+ G L R Sbjct: 4 FKIPNMGALVAFEAAARHESFTHAAKELFLTESAVSRQIATLESSLGVRLFARVKQRVVL 63 Query: 61 EQGQKLLA--LLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 + KL + R +E L+ + L GS L LAV + WL+P + +P Sbjct: 64 TRAGKLYGTQVRRALEALDRDTLSIIAHGSGGGYLELAVLPTFASHWLIPRIKSFYDRTP 123 Query: 119 -IRLNL 123 +R+N+ Sbjct: 124 DVRVNM 129 >UniRef50_D0J1E9 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J1E9_COMTE Length = 321 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 76/323 (23%), Positives = 126/323 (39%), Gaps = 51/323 (15%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-----TVP 56 K P L+A + R F +AA++L +T SAVS ++K LE G L VR T+ Sbjct: 20 KIPPLNPLRAFEVSARHMSFTKAAEELFVTPSAVSHQVKSLEENLGIALFVRDSKTLTLT 79 Query: 57 PRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLAD 116 P + RQ+E+ + ++ T LL + + WL+P L+ A Sbjct: 80 PAGKAYLPGVQEAFRQLEVATYQLHREKSTA----LLKINLPPTFAVKWLIPRLS-RFAS 134 Query: 117 SPIRLNLQVE----------DETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLF 166 + L+L+V D+ + R RG G S LP +F Sbjct: 135 EHLDLDLKVSTSKLMADFSRDDVDMEIRYGRGVYAGLYS--EMVLPV----------EVF 182 Query: 167 VSSKPFAEKYFPNGVTRSALLKAPVVAFDH--LDDM----------HQAFLQQNFDLPPG 214 P A + P+ + A L++ V+ D DD+ H N P Sbjct: 183 AVCSP-ALQQGPHPIRDFADLRSHVLLHDDSTYDDVSNPNWATWLAHMGVHDINATRGPS 241 Query: 215 SVPCHIVNSSEAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAP 274 P H+V + A G ++ ++++LASG+L+ L P ++ P Sbjct: 242 FWPSHLV------IDAAIDGQGVALVKKSWVQQDLASGKLVRLFPEYSLPIEFAYYLVFP 295 Query: 275 ESRMMRKVTDALLDYGHKVLRQD 297 +SR+ + +D+ L +D Sbjct: 296 QSRLGDPRITSFVDWMRAELARD 318 >UniRef50_B2Q0Q6 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q0Q6_PROST Length = 295 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQG 63 D R+L+ V++ GF RAA++L +TQ A+S+ I++LE G LLVR R T++G Sbjct: 2 DIRSLRYFVEVVQLNGFSRAAERLFVTQPAISRSIQKLEQELGYTLLVRENDGVRLTDEG 61 Query: 64 QKLLALLRQV 73 + LL+ +Q+ Sbjct: 62 EILLSHAKQI 71 >UniRef50_A6VUY4 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6VUY4_MARMS Length = 311 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 60/230 (26%), Positives = 99/230 (43%), Gaps = 27/230 (11%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQ 62 P ++L +AV R F AA +L ++QSAVS +I+ LEN G+ L R T++ Sbjct: 3 PPLKSLPVFEAVARLNSFSLAANELNVSQSAVSHQIRILENHLGESLFHRQGRKLELTKE 62 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 G+ L + LL+ E + G + LAV + WL+P L P L L Sbjct: 63 GKHYLDSISN-SLLQIEEATNHIKGQQKTHIRLAVYSSFAVYWLIPRL-PELKHLHPNLE 120 Query: 123 LQVE-------------DETRTQERLRRGEVVGAVSIQHQALPSC-------LVDKLGAL 162 L +E D T E+ +RG + Q + P C + +KLGA+ Sbjct: 121 LSIEMSHGTPDLSDRTADFFITTEKEKRG-FQFELLYQEELFPVCSQNYIETIKNKLGAV 179 Query: 163 DYLFVSSKPFAEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLP 212 + + +K + P+ + + L+ + + H++D + F LP Sbjct: 180 THQELLNKLSST---PSCLAQFPLITSYSIYDRHIEDWKRWFANLKHTLP 226 >UniRef50_A1UZB2 Transcriptional regulator, LysR family n=39 Tax=Proteobacteria RepID=A1UZB2_BURMS Length = 312 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 81/301 (26%), Positives = 126/301 (41%), Gaps = 28/301 (9%) Query: 14 AVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQGQKLLALLRQ 72 AV+ F AA L ++AVS +KQLE G LL RT TE G++ + Sbjct: 18 AVVEAGSFTGAANVLNQARAAVSFHVKQLEAELGVTLLTRTTRRVELTEAGERFYERCLR 77 Query: 73 VELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLAD-SPIRLNLQVEDETRT 131 V EE + D + + SL V S + L +AP L++ L+V ET T Sbjct: 78 VLAEAEEAIDDARAEHGGMQGSLRVT--STVEYALRIVAPALSEFMSAHPALRVRLETHT 135 Query: 132 -QERLRRGEVVGAVSI----QHQALPSCLVDKLGALDYLFVSSKPFAEKYF--PNGVTR- 183 Q L R A+ + Q + LP V +D V +P A +GV R Sbjct: 136 SQADLVRDRFDVAIRLGRLEQFRDLPYRGV----CIDTYDV--RPVASPALLAAHGVARI 189 Query: 184 ---SALLKAPVVAFDHLDDMHQAFLQ----QNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 AL + P + L + L + P + P I +++ A+QG Sbjct: 190 DSPEALARLPQLGHSRLSQVASWLLHDRDGREHVYRPAAKPHLIADNASVLRAFAQQGGG 249 Query: 237 CCMIPHLQIEKELASGELIDLTPGL-FQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 ++P + +LASG LID PG F ++ +Y P +R + + A +D+ + +R Sbjct: 250 VALLPEWLVRDDLASGTLIDALPGYRFAQQGVY--ALYPSARHVPQKIRAWIDFIKRYVR 307 Query: 296 Q 296 + Sbjct: 308 R 308 >UniRef50_B9Z6G4 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z6G4_9NEIS Length = 290 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 26/52 (50%), Positives = 35/52 (67%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR 53 K P L+ +AV R + F +AA+ L +TQSAVS +I++LE FG PLLVR Sbjct: 3 KLPPLNALRIFEAVARLQSFTKAAEALYLTQSAVSHQIRKLEEHFGFPLLVR 54 >UniRef50_B2K791 Transcriptional regulator, LysR family n=24 Tax=Enterobacteriaceae RepID=B2K791_YERPB Length = 308 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 1/114 (0%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPT 60 K P R L+ + F +AA+ L +TQSA S++IKQLEN G+ L +R T Sbjct: 3 KLPSLRMLRVFEEACHTLSFSKAAEALFMTQSAASRQIKQLENFLGKSLFIRGHRGLELT 62 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVL 114 + +L ++RQ L EE + Q + L L V WL P L +L Sbjct: 63 QDAMTMLPIVRQSLDLLEEGVKHVQLSNPLQHLRLQVAPTFATRWLAPRLVTLL 116 >UniRef50_Q0JZC7 Transcriptional regulator, LysR-family n=4 Tax=Burkholderiales RepID=Q0JZC7_RALEH Length = 325 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 12/127 (9%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQG 63 D R ++ A++ + RAA+ +C+ Q A+SQ++ LE G PL+ R +PTE G Sbjct: 2 DLRAMRYFIAIVDQGSLTRAAEVVCVAQPALSQQLAALEKELGVPLVHRGAKGVKPTEAG 61 Query: 64 QKLL----ALLRQVEL--LEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 + L +LRQVE+ E G + TG ++++ + + A + +P + V A Sbjct: 62 RTLYRHARNILRQVEIAGAEARVAGTDVTG----MVAIGLPTTAAAAFGMPLIRAVRARY 117 Query: 118 P-IRLNL 123 P IRL L Sbjct: 118 PQIRLQL 124 >UniRef50_C5CZ98 Transcriptional regulator, LysR family n=6 Tax=Proteobacteria RepID=C5CZ98_VARPS Length = 289 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 50/150 (33%), Positives = 72/150 (48%), Gaps = 16/150 (10%) Query: 1 MKRPDYRT--LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR 58 MK PD++ L+AL AV+ AA + +QSAVS +IK+LEN GQ +L+R PR Sbjct: 1 MKYPDFQIDWLRALVAVVDAGSLSAAAPLVHRSQSAVSMQIKKLENALGQAVLLRG--PR 58 Query: 59 PTE---QGQKLLALLRQVELLEEE----WLGDEQTGSTPLLLSLAVNADSLATWLLPALA 111 E G +LL R++ L+ E G E G + L V D +T+L P L Sbjct: 59 HLEVTPAGAQLLGYARRMLELQSETQNAMFGPELAGR----VRLGVPDDYASTYLTPVLR 114 Query: 112 PVLAD-SPIRLNLQVEDETRTQERLRRGEV 140 + + L E T ++ RGE+ Sbjct: 115 SFAGRYKGVEIELTCEQSTSLIPKIARGEL 144 >UniRef50_B0T7G9 Transcriptional regulator, LysR family n=2 Tax=Caulobacteraceae RepID=B0T7G9_CAUSK Length = 301 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 1/71 (1%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRP 59 M+ ++ L+A AV +ER F RAA +L +T SA+S I+ LE G LL RT P Sbjct: 2 MRATEFGELRAFAAVAQERSFRRAATRLGVTPSALSHVIRALEERLGVKLLHRTTRSVAP 61 Query: 60 TEQGQKLLALL 70 TE G LL L Sbjct: 62 TEAGAALLGRL 72 >UniRef50_A3YG20 Transcriptional regulator, LysR-family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YG20_9GAMM Length = 293 Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 78/317 (24%), Positives = 134/317 (42%), Gaps = 52/317 (16%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRPTEQG 63 D R L +L V+ AA+ +T +AVSQRIK LE G PLL R+ +PTE Sbjct: 2 DIRFLSSLLEVVNTGSIAAAARNQMLTSAAVSQRIKALEQSLGCPLLNRSGHSAKPTEAC 61 Query: 64 QKLLALLRQVELLEEEWLGD-EQTGSTPLLLSLAVNADSLA-TWLLPALAPVLADSPIRL 121 +LL L+ + + D +QTG T L V A S A T ++P++ L L Sbjct: 62 LRLLPRLKHLVAETQALQNDLDQTGLTG---DLKVGAVSTALTGIMPSVIKQLTAHLPDL 118 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFA-EKYFPNG 180 NLQ+ T L L+DK +LD + + PF KY Sbjct: 119 NLQISPGTSAN------------------LYQQLLDK--SLDVIIIVKPPFVCPKYLQTS 158 Query: 181 V-----------------TRSALLKAPVVAFDHL---DDMHQAFLQQNFDLPPGSVPCHI 220 + +LL P + +D + ++L + D+ ++ C + Sbjct: 159 TLYTEQLGFISSDTNTLSIKESLLNLPYIQYDRSAWGGAIADSYL-LDCDIAANTL-CEL 216 Query: 221 VNSSEAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGL-FQRRM-LYWHRFAPESRM 278 ++ E+ V + ++ ++P Q +E+A+ I G +QR + L HR + R+ Sbjct: 217 -DALESIVLMVKRNMGVSLVPIWQGLEEVANNIKIQPISGKEYQRHIQLITHRQVGKERL 275 Query: 279 MRKVTDALLDYGHKVLR 295 + +D ++ ++++ Sbjct: 276 IEAFSDTVMKASKELIK 292 >UniRef50_Q0B9D7 Transcriptional regulator, LysR family n=19 Tax=Burkholderia RepID=Q0B9D7_BURCM Length = 326 Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 5/75 (6%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQGQKLL 67 + A AV+R + +AA +L +TQ A+++R++ LE G LL R T PPRPT+ G+++ Sbjct: 25 IDAFAAVVRCQTLSQAATELGMTQPAITRRVQNLEEALGVTLLDRNTKPPRPTDIGRQVF 84 Query: 68 ----ALLRQVELLEE 78 A+LR+V+ L E Sbjct: 85 EQCRAILREVDALRE 99 >UniRef50_C8W9Q2 Transcriptional regulator, LysR family n=2 Tax=Atopobium RepID=C8W9Q2_ATOPD Length = 313 Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 68/278 (24%), Positives = 117/278 (42%), Gaps = 32/278 (11%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 +++T+ AV E+ F +AA++L +TQ +S I E G LL RTVP T G+ Sbjct: 2 NFQTMDYFVAVAEEKSFTKAAERLSVTQQTLSANIAAAEKELGSKLLERTVPLSLTFAGE 61 Query: 65 KLLALLR----QVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 + L R Q +++E+L + G+ L + V A + ++P + A + Sbjct: 62 EFLRYARRFQAQRRAMDQEFL--DIAGNERGRLHVGVTA-TRGHIIMP--RSIAAFQKLH 116 Query: 121 LNLQVE-DETRTQ---ERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY 176 N+ +E DE E L G++ V+ + A ++ KL + V S+ E Sbjct: 117 PNISIELDEGENDELVEWLSEGQLDLIVATVNSASYDLVIQKLFDEKIVLVVSQALLESL 176 Query: 177 FPNGVTR-----------SALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVN-SS 224 + + V +AL P + D+ +F + F S +++ +S Sbjct: 177 YADKVDSVVSQVKRTGKLTALEACPFLTVGK-RDIAGSFARHAFAASGISPTIKVMSRNS 235 Query: 225 EAFVQLARQGTTCCMIPHLQIEKELASGELIDL-TPGL 261 E + LA +G C +P EL + D T GL Sbjct: 236 ETLLALAMRGVGACFLP-----SELVASSYYDFETSGL 268 >UniRef50_B7V4S2 Probable transcriptional regulator n=7 Tax=Pseudomonas aeruginosa RepID=B7V4S2_PSEA8 Length = 304 Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 25/54 (46%), Positives = 35/54 (64%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT 54 ++R D L LDA++ ER RAAQ+L ++Q AVS + +L +FG PLLVR Sbjct: 7 LRRIDLNLLVVLDALLSERHVSRAAQRLAMSQPAVSHALGRLRELFGDPLLVRV 60 >UniRef50_D1VDU1 Transcriptional regulator, LysR family n=2 Tax=Actinomycetales RepID=D1VDU1_9ACTO Length = 291 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 4/108 (3%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP--TEQ 62 D L++L ++ GF RAA L ++QSAVSQ I++LE + G+P LVR R T + Sbjct: 6 DIVALRSLTSIADSGGFRRAADSLHLSQSAVSQHIRRLEQVCGRP-LVRRGGNRAQFTPE 64 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPAL 110 G+ L+A R++ ++ LG Q + L + + A LLP++ Sbjct: 65 GELLVAEARKILAAHDDALGRLQAADSGRTLVIGAT-EHAADLLLPSI 111 >UniRef50_Q28S71 Transcriptional regulator, LysR family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28S71_JANSC Length = 302 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 81/315 (25%), Positives = 124/315 (39%), Gaps = 35/315 (11%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 MKR D + L AV+ F A L +T SA+SQ +KQLE G PLL RT Sbjct: 1 MKRTDLDGILPLLAVVEHGSFRAGAAALGVTPSAISQSVKQLEERIGVPLLTRTTRSVGL 60 Query: 61 EQGQKLLALLRQVELLE--EEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLAD-- 116 Q +L + E + + G P L L ++A LA + ALAPVL + Sbjct: 61 TQAGQLFVDRASPAICEVRDALASISEFGQRPSGL-LRISAPRLAYPV--ALAPVLPEFM 117 Query: 117 ---SPIRLNLQVED------ETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFV 167 I + + +ED ++R +R G V A + P + + + DYL Sbjct: 118 KTYPEIEVEISLEDTLTDIVQSRFDAGIRLGATVEADMVARALTPPSRMCVVASPDYLDA 177 Query: 168 SSKPFAEKYFPNGVTRSALLKAPVVAF---DHLDDMHQAFLQQNFD--LP-PGSVPCHIV 221 P T LL + F H FL++ D +P PG + IV Sbjct: 178 HGVP---------ETPDDLLSHRCINFRRPTRKTVYHWRFLERGEDRHIPVPGVM---IV 225 Query: 222 NSSEAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRK 281 N + A + A G +E+ + +G LI + G + + +H + P + + Sbjct: 226 NDTAAKIDAALNGFGLAYELAPVVEQHVKAGRLISVLEG-YLPEVPGFHIYYPGRKQIML 284 Query: 282 VTDALLDYGHKVLRQ 296 +D+ LR Sbjct: 285 KLRVFIDFAAAELRS 299 >UniRef50_A9D6M6 Transcriptional regulator, LysR family protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D6M6_9RHIZ Length = 309 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 70/259 (27%), Positives = 114/259 (44%), Gaps = 21/259 (8%) Query: 7 RTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQGQK 65 R ++A V F +AA KL TQ A+S RI LE+ GQ L VR + T GQ Sbjct: 7 RQMEAFVWVAALESFRKAATKLNTTQPAISTRIATLEDQLGQQLFVRDAGQVQLTSAGQM 66 Query: 66 LLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWL---LPALAPVLADSPIRLN 122 LL R++ + ++ E + +L L V + +WL L AL+ + + Sbjct: 67 LLPKARRLISIADDISTGEGSEKQRGILRLGVAETIVHSWLPDFLKALSRRFPLVDVDVL 126 Query: 123 LQVEDETRTQ---ERLRRGEVVGAVS---IQHQALPSCLVDKLGALDYLFVSSKPFAEKY 176 + V R + RL ++G VS I + LP+ + A + +K Sbjct: 127 VDVTVNLRNELIDHRLDLAFLMGPVSEYRIGNVDLPAFPLIWTAAPELAMPETKE----- 181 Query: 177 FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVP-CHIVNSSEAFVQLARQGT 235 V +ALL PV+ + + A L+Q F G +P V++ A +++A G Sbjct: 182 ----VPLTALLAHPVITYARTTRPY-AELRQKFSDLNGPLPRIFPVSTLAASLRMALDGV 236 Query: 236 TCCMIPHLQIEKELASGEL 254 ++PH + + LA+G+L Sbjct: 237 GIAVLPHTMVREHLATGQL 255 >UniRef50_D1XMU9 Transcriptional regulator, LysR family n=1 Tax=Streptomyces sp. ACTE RepID=D1XMU9_9ACTO Length = 328 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 82/299 (27%), Positives = 132/299 (44%), Gaps = 28/299 (9%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP---T 60 PD + L +V R RAA+ + ITQ A S RI+ +E G LL R+ PR T Sbjct: 29 PDLGAMVLLLSVARHGSLGRAARDVGITQPAASSRIRSMERQLGVALLDRS--PRGSRLT 86 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNAD-SLATWLLPA-LAPVLADSP 118 + G + R+V E + Q L V A ++A +L+P L + AD P Sbjct: 87 DAGALVTDWARRVVEAAEAFDAGAQALRDRRDSRLRVAASMTIAEYLMPGWLIALRADRP 146 Query: 119 -IRLNLQVEDETRTQERLRRGEV-VGAVSIQHQALPSCLVDKLGALDYLFV---SSKPFA 173 ++L + RL GE +G V + ++P L + A D L V S P+A Sbjct: 147 DTAVSLLAGNSAAVALRLLAGEADLGFV--EGLSVPEGLDGTVIAHDRLVVVVAPSHPWA 204 Query: 174 EKYFPNGVTRSALLKAPVVAFDHLDDMHQ---AFLQQNFDLPPGSVPCHIVNSSEAFVQL 230 + +T L P++ +H Q A L + L ++P ++S+ A Sbjct: 205 RRR--TQLTPRELAATPLILREHGSGTRQVLDAALAVHGGL---ALPLLELSSTTAVKGA 259 Query: 231 ARQGTTCCMIPHLQIEKELASGELIDL-TPGLFQRRML--YW---HRFAPESRMMRKVT 283 A G C++ L +++EL++ L+++ G+ RR L W HR A +R + +T Sbjct: 260 AESGAGPCVLSELALDEELSARRLVEIPVAGVRLRRQLRAVWPAGHRPAGPARDLLSLT 318 >UniRef50_B4RB31 Transcriptional regulator, LysR family n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RB31_PHEZH Length = 312 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 67/143 (46%), Gaps = 26/143 (18%) Query: 1 MKRPDY-RTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR---TVP 56 M P Y R+LQAL+ +R+ F AA+ L IT +AV QR+K LE+ G LL R + Sbjct: 1 MVAPTYLRSLQALELAVRKGSFIAAAEALGITPAAVGQRVKALEDYLGVELLTRGRSGLR 60 Query: 57 PRPT--------EQG-QKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLL 107 P P +G ++L A R++EL Q G L LA +D + WL Sbjct: 61 PAPGLVPALAHLNRGFEELAAAARELEL---------QRGHE---LHLAAASDFVDLWLA 108 Query: 108 PALAPVLADSP-IRLNLQVEDET 129 P L A P I N+ E E Sbjct: 109 PRLERFRAAHPNILFNINGEGEA 131 >UniRef50_UPI0001C36FDC transcriptional regulator, LysR family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36FDC Length = 293 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 4/138 (2%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP-TEQG 63 D R L+ AV RE+ F AA++L ++Q +S++IK+LE+ G LL+R+ TE+G Sbjct: 2 DIRVLKYFLAVAREQSFSVAAERLFLSQPTLSRQIKELEDELGTQLLIRSSKGVTLTEEG 61 Query: 64 QKLLALLRQV-ELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVL-ADSP-IR 120 L A ++ ELL++ ++G + ++ A L+ +A L AD P I+ Sbjct: 62 MILRARAEEITELLDKTEQEVRKSGEQVSGMVYIGAGETYAIKLIADIAKKLNADYPDIQ 121 Query: 121 LNLQVEDETRTQERLRRG 138 ++ D + E+L RG Sbjct: 122 YSIYSADASDVLEKLDRG 139 >UniRef50_A4F9I6 Similar to transcriptional regulator (LysR family) n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4F9I6_SACEN Length = 295 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 50/112 (44%), Gaps = 12/112 (10%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 M + L+A AVI E GF A+ L I+QSAVS + LE G +LVR PRPT Sbjct: 1 MNNVNLAQLRAFLAVIDEGGFGAASDALRISQSAVSHAVAALERAVGCRVLVRQGRPRPT 60 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAP 112 G+++L R +T + LA D L T L AP Sbjct: 61 AFGERILGHARTA------------VSATDSITELAARRDGLPTGTLRLAAP 100 >UniRef50_A0LD88 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD88_MAGSM Length = 312 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 5/80 (6%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP---- 56 + + D L A DA++ ERG RA ++L ITQ+A+S +++L F PL ++T Sbjct: 9 LNKFDLNLLVAFDALMSERGVTRAGRRLGITQAAMSNTLRRLRTAFDDPLFIKTGARMEP 68 Query: 57 -PRPTEQGQKLLALLRQVEL 75 PR E + A L+QV + Sbjct: 69 TPRAMELSGMIEAALKQVHV 88 >UniRef50_Q28K92 Transcriptional regulator, LysR family n=2 Tax=Rhodobacteraceae RepID=Q28K92_JANSC Length = 321 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/48 (52%), Positives = 32/48 (66%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR 53 Y +L+A +AV+R F AA L ++QSAVSQ +K LE GQ LLVR Sbjct: 19 YASLRAFEAVVRLGSFSAAAGDLGVSQSAVSQHVKSLEEWLGQELLVR 66 >UniRef50_Q30Z73 Transcriptional regulator, LysR family n=3 Tax=Desulfovibrio RepID=Q30Z73_DESDG Length = 319 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 69/281 (24%), Positives = 115/281 (40%), Gaps = 28/281 (9%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLL---VRTVPPRPTE 61 D+R L+A V R F RA +L ++Q +S + LE LL R V P P Sbjct: 25 DFRRLEAFCKVYELRSFSRAGDELFLSQPTISAHVSALEKELDVRLLDRMGRGVLPTPAG 84 Query: 62 QGQKLLALLRQVEL----LEEEWLGDEQTGSTPLLLSLAVNADSL-ATWLL-PALAPVLA 115 + A+ L LE L D TG P V A ++ A +LL P +A + Sbjct: 85 EILYRHAMTAFASLETAHLEISQLQDIITGEVP------VGASTIPAQYLLPPVMAAYMR 138 Query: 116 DSP-IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAE 174 P ++L L+ D ++ GE+ V H P + + + + + + FA Sbjct: 139 SFPEVQLQLRTGDTGEIIRKVGAGELTLGVVGAHDQQPDIVFTPIIDDELIIIGAPDFAP 198 Query: 175 KYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCH------IVNSSEAFV 228 + V+ +L P V + + F + L + C V+SS++ + Sbjct: 199 R--SGSVSCESLADMPWVVREAGSGTWKIF---SAALGTHGIDCRSFRPVACVDSSQSVI 253 Query: 229 QLARQGTTCCMIPHLQIEKELASGELIDLT-PGLFQRRMLY 268 Q R G + + + + L+ GEL+++T GL RR + Sbjct: 254 QCVRAGLGVSVTSRIAVAEFLSRGELVEITVDGLDVRREFF 294 >UniRef50_Q0A4N3 Transcriptional regulator, LysR family n=3 Tax=Ectothiorhodospiraceae RepID=Q0A4N3_ALHEH Length = 313 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 81/304 (26%), Positives = 133/304 (43%), Gaps = 29/304 (9%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLL---VRTVPPRPTE 61 + R L+ L AV +R F RAA+ ++Q +S ++K+LE G L+ R V PT Sbjct: 2 NLRDLRYLVAVGDQRHFGRAAKACFVSQPTLSAQVKKLEEYLGVQLVERGTRQVLLTPT- 60 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNA-DSLATWLLPALAPVLADSPIR 120 G++++A R V ++ + + + P+ L + A +LA +LLP L ++ R Sbjct: 61 -GEEVVARARAVLNQVDDIVELCRAAAEPMTGELRLGAIPTLAPYLLPHLVATATEAWPR 119 Query: 121 LNLQVEDETRTQ---ERLRRGEVVGAVSIQHQALPSCLVD--KLGALDYLFVSSKP---- 171 L + + +E RT ERLR+GE+ GA+ A+P D + + FV + P Sbjct: 120 LRMLLYEE-RTALLVERLRKGELDGAL----MAMPVAGDDLASVAVFEEPFVLALPADHA 174 Query: 172 FAE-KYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQL 230 AE K P + L D Q D G C S E Q+ Sbjct: 175 LAEAKRAPRPEALPEDELLLLEEGHCLRDQALEVCQLAGD--AGGTSCFRATSLETLRQM 232 Query: 231 ARQGTTCCMIPHL--QIEKEL---ASGELIDLTPGLFQRRM-LYWHRFAPESRMMRKVTD 284 G ++P L Q E+ ++ +L+ +P + R + LYW + A + + V Sbjct: 233 VAAGVGMTLLPRLAGQAGCEIPNQSAVKLLPFSPPVPTRTIGLYWRKGAARASTLEAVAA 292 Query: 285 ALLD 288 A+ D Sbjct: 293 AIRD 296 >UniRef50_B9M6N2 Transcriptional regulator, LysR family n=1 Tax=Geobacter sp. FRC-32 RepID=B9M6N2_GEOSF Length = 298 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 29/60 (48%), Positives = 37/60 (61%), Gaps = 1/60 (1%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQGQKLL 67 L+ L V++ F AA LCITQSAVSQRIK LE +G L+ R+ PTE G+ +L Sbjct: 6 LKTLHTVVKTGSFSLAASDLCITQSAVSQRIKFLEERYGLSLVDRSGQSVTPTEAGRIVL 65 >UniRef50_D0J2M8 Transcriptional regulator, LysR family n=2 Tax=Comamonas testosteroni RepID=D0J2M8_COMTE Length = 317 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 4/81 (4%) Query: 7 RTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP-TEQGQK 65 R L+A D V R+ F AA++LC+TQSA+S+ I+QLE G L RT T GQ Sbjct: 11 RQLRAFDEVARQGAFAPAARELCLTQSALSESIRQLEEALGLRLFDRTTRTVGLTAAGQA 70 Query: 66 LLALLRQV-ELLEEEW--LGD 83 L +RQ E LE+ + LGD Sbjct: 71 FLLDVRQAFETLEQGFQNLGD 91 >UniRef50_A6CYZ8 Hypothetical transcriptional regulator, LysR family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CYZ8_9VIBR Length = 304 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 14/122 (11%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-----VP 56 ++ + L L+ ++ E+ RAA++L +TQSAVS+++ QL +++ PLLVR + Sbjct: 3 QKTNLNLLYTLEVLLAEKHVSRAAERLNLTQSAVSRQLSQLRDIYHDPLLVRNGNHYVLT 62 Query: 57 PRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAV---NADSLATWLLPALAPV 113 PR G +L L + + + LG Q PLL ++D +A ++LP L + Sbjct: 63 PRAERLGAELEDLFQNITKV----LG--QADFDPLLFDQTFTFSSSDYVAQYILPELVEL 116 Query: 114 LA 115 L+ Sbjct: 117 LS 118 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A7FF10 Chromosome initiation inhibitor n=169 Tax=Gammap... 376 e-103 UniRef50_Q7MHL5 Chromosome initiation inhibitor n=55 Tax=Vibrion... 296 6e-79 UniRef50_P70773 Chromosome initiation inhibitor n=6 Tax=Gammapro... 293 6e-78 UniRef50_Q2BJ31 Chromosome replication initiation inhibitor prot... 293 7e-78 UniRef50_Q47WN2 Chromosome initiation inhibitor n=2 Tax=Alteromo... 285 1e-75 UniRef50_B8FDR1 Transcriptional regulator, ArgP, LysR family n=2... 285 2e-75 UniRef50_Q7NUX8 Inhibitor of chromosome initiation IciA n=2 Tax=... 276 6e-73 UniRef50_C1D4J6 IciA n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 275 1e-72 UniRef50_C6BY65 Transcriptional regulator, LysR family n=1 Tax=D... 274 2e-72 UniRef50_Q0I356 Chromosome initiation inhibitor n=6 Tax=Gammapro... 272 1e-71 UniRef50_C4KCF0 Transcriptional regulator, ArgP, LysR family n=1... 271 1e-71 UniRef50_B1Y350 Transcriptional regulator, LysR family n=2 Tax=P... 268 1e-70 UniRef50_A3D5N6 Transcriptional regulator, LysR family n=18 Tax=... 266 5e-70 UniRef50_C3JN11 Transcriptional regulator, LysR family n=2 Tax=R... 263 5e-69 UniRef50_D0STT3 DnaA/argK transcriptional regulator n=1 Tax=Acin... 262 1e-68 UniRef50_C6DHV2 Transcriptional regulator, ArgP, LysR family n=4... 261 2e-68 UniRef50_A6Y5L9 Transcriptional regulator n=2 Tax=Vibrio cholera... 260 3e-68 UniRef50_C7LQL1 Transcriptional regulator, ArgP, LysR family n=1... 260 5e-68 UniRef50_C8WDF3 Transcriptional regulator, ArgP, LysR family n=3... 256 7e-67 UniRef50_Q02H78 Chromosome initiation inhibitor n=28 Tax=Gammapr... 256 7e-67 UniRef50_B9B8W0 Transcriptional regulator, LysR family n=3 Tax=B... 255 1e-66 UniRef50_B9JYX8 Transcriptional regulator LysR family n=9 Tax=Al... 254 2e-66 UniRef50_B4S2Z4 Chromosome replication initiation inhibitor prot... 254 3e-66 UniRef50_Q2T9B3 Transcriptional regulator, LysR family n=54 Tax=... 254 3e-66 UniRef50_A1TMH4 Transcriptional regulator, LysR family n=9 Tax=c... 253 4e-66 UniRef50_D1U749 Transcriptional regulator, LysR family n=1 Tax=D... 253 4e-66 UniRef50_B9JHJ0 Transcriptional regulator protein n=1 Tax=Agroba... 252 9e-66 UniRef50_A1VG08 Transcriptional regulator, LysR family n=3 Tax=D... 252 1e-65 UniRef50_A1R3I4 Putative transcriptional regulator, LysR family ... 252 1e-65 UniRef50_A3Y969 Chromosome replication initiation inhibitor prot... 251 2e-65 UniRef50_C7RVK7 Transcriptional regulator, LysR family n=1 Tax=C... 251 2e-65 UniRef50_Q30VM9 Transcriptional regulator, LysR family n=1 Tax=D... 251 3e-65 UniRef50_Q6FDJ8 Inhibitor of replication initiation (Transcripti... 249 8e-65 UniRef50_Q2RWN3 Transcriptional regulator, LysR family n=20 Tax=... 248 1e-64 UniRef50_B4SNX8 Transcriptional regulator, LysR family n=12 Tax=... 247 2e-64 UniRef50_D0L7H5 Transcriptional regulator, ArgP family n=1 Tax=G... 247 4e-64 UniRef50_B8DQE7 Transcriptional regulator, LysR family n=1 Tax=D... 245 1e-63 UniRef50_A3MG84 Chromosome initiation inhibitor n=54 Tax=Proteob... 245 1e-63 UniRef50_Q93JR1 AttR protein n=1 Tax=Rhodococcus fascians RepID=... 245 2e-63 UniRef50_C1SIA9 Transcriptional regulator, ArgP family n=1 Tax=D... 244 2e-63 UniRef50_Q4UXK0 Transcriptional regulator lysR family n=8 Tax=Xa... 243 5e-63 UniRef50_D2NQ78 Transcriptional regulator n=2 Tax=Rothia mucilag... 243 6e-63 UniRef50_Q13XH7 Transcriptional regulator, LysR family n=4 Tax=B... 242 1e-62 UniRef50_Q46UY3 Regulatory protein, LysR:LysR, substrate-binding... 242 1e-62 UniRef50_B8H9B0 Transcriptional regulator, ArgP, LysR family n=5... 241 3e-62 UniRef50_A3K0M9 Chromosome replication initiation inhibitor prot... 240 4e-62 UniRef50_P67665 Uncharacterized HTH-type transcriptional regulat... 240 5e-62 UniRef50_B2SEE8 Chromosome replication initiation inhibitor prot... 239 8e-62 UniRef50_C6XMP9 Transcriptional regulator, ArgP, LysR family n=1... 237 2e-61 UniRef50_Q1GFE2 Transcriptional regulator, LysR family n=4 Tax=R... 237 5e-61 UniRef50_C7QYI6 Transcriptional regulator, ArgP, LysR family n=1... 236 8e-61 UniRef50_A4BE26 Chromosome replication initiation inhibitor prot... 236 1e-60 UniRef50_C2AIB0 Transcriptional regulator, ArgP family n=1 Tax=T... 230 5e-59 UniRef50_D1BHX4 Transcriptional regulator, ArgP family n=1 Tax=S... 229 6e-59 UniRef50_P94632 Lysine export transcriptional regulatory protein... 229 1e-58 UniRef50_C7NH55 Transcriptional regulator, ArgP family n=1 Tax=K... 227 4e-58 UniRef50_C7QF32 Transcriptional regulator, ArgP, LysR family n=3... 227 5e-58 UniRef50_B9NY95 Chromosome replication initiation inhibitor prot... 224 2e-57 UniRef50_Q123B5 Transcriptional regulator, LysR family n=3 Tax=C... 223 5e-57 UniRef50_A2SLN2 Transcriptional regulator, LysR family n=14 Tax=... 222 1e-56 UniRef50_UPI0001BC2B66 transcriptional regulator, ArgP, LysR fam... 218 2e-55 UniRef50_C3PFW1 Lysine export transcriptional regulatory protein... 216 6e-55 UniRef50_A0JRX4 Transcriptional regulator, LysR family n=2 Tax=M... 216 9e-55 UniRef50_A3TNV7 Chromosome replication initiation inhibitor prot... 214 4e-54 UniRef50_C5C7I2 Transcriptional regulator n=3 Tax=Actinomycetale... 211 2e-53 UniRef50_A4JNN0 Transcriptional regulator, LysR family n=1 Tax=B... 209 1e-52 UniRef50_B7RUK1 LysR substrate binding domain protein n=1 Tax=ma... 204 3e-51 UniRef50_D0J1E9 Transcriptional regulator, LysR family n=1 Tax=C... 204 3e-51 UniRef50_A5V6Y9 Transcriptional regulator, LysR family n=1 Tax=S... 200 4e-50 UniRef50_B2JXM7 Transcriptional regulator, LysR family n=4 Tax=B... 196 7e-49 UniRef50_Q2BQI7 Hypothetical D-serine deaminase activator n=1 Ta... 193 7e-48 UniRef50_P0A9F8 Glycine cleavage system transcriptional activato... 192 9e-48 UniRef50_A7FFF5 Glycine cleavage system transcriptional activato... 189 8e-47 UniRef50_A6VD26 Transcriptional Regulator, LysR family n=27 Tax=... 189 8e-47 UniRef50_A6WYX4 Transcriptional regulator, LysR family n=38 Tax=... 189 9e-47 UniRef50_Q15X65 Transcriptional regulator, LysR family n=1 Tax=P... 188 2e-46 UniRef50_B9JKI0 Transcriptional regulator protein (Activator) n=... 188 2e-46 UniRef50_A3Y562 Transcriptional regulator, LysR family protein n... 188 3e-46 UniRef50_B5XS26 Transcriptional regulator, LysR family n=6 Tax=P... 187 4e-46 UniRef50_Q0HUM5 Transcriptional regulator, LysR family n=20 Tax=... 186 8e-46 UniRef50_Q210B4 Transcriptional regulator, LysR family n=7 Tax=P... 186 8e-46 UniRef50_A7HSK5 Transcriptional regulator, LysR family n=2 Tax=B... 186 9e-46 UniRef50_B9Z4C8 Transcriptional regulator, LysR family n=1 Tax=L... 186 9e-46 UniRef50_Q0KCL9 Transcriptional regulator, LysR-family n=2 Tax=C... 185 1e-45 UniRef50_A4JTI2 Transcriptional regulator, LysR family n=15 Tax=... 185 2e-45 UniRef50_A1UWF0 Transcriptional regulator, LysR family n=50 Tax=... 184 4e-45 UniRef50_A3VZZ4 Transcriptional regulator, LysR family protein n... 183 6e-45 UniRef50_A9IQK9 Transcriptional regulator, LysR-family n=6 Tax=B... 181 3e-44 UniRef50_Q485T8 Substrate-binding transcriptional regulator, Lys... 180 3e-44 UniRef50_A6UEA0 Transcriptional regulator, LysR family n=7 Tax=A... 180 7e-44 UniRef50_Q39LC6 Transcriptional regulator, LysR family n=1 Tax=B... 179 2e-43 UniRef50_Q28S71 Transcriptional regulator, LysR family n=1 Tax=J... 178 2e-43 UniRef50_B2IKM7 Transcriptional regulator, LysR family n=3 Tax=P... 178 2e-43 UniRef50_Q2BZ62 Transcriptional activator AmpR n=1 Tax=Photobact... 178 2e-43 UniRef50_B8IVZ6 Transcriptional regulator, LysR family n=1 Tax=M... 178 2e-43 UniRef50_D0D8S3 Transcriptional regulator, LysR family n=1 Tax=C... 177 3e-43 UniRef50_C8WTC6 Transcriptional regulator, LysR family n=1 Tax=A... 177 4e-43 UniRef50_B8CNJ7 Regulatory protein, LysR:LysR, substrate-binding... 177 6e-43 UniRef50_B9Z6G4 Transcriptional regulator, LysR family n=1 Tax=L... 177 6e-43 UniRef50_A1AYS4 Transcriptional regulator, LysR family n=1 Tax=P... 176 7e-43 UniRef50_B9K5H2 Transcriptional regulator LysR family n=1 Tax=Ag... 175 1e-42 UniRef50_B1JZS0 Transcriptional regulator, LysR family n=19 Tax=... 175 1e-42 UniRef50_Q28K92 Transcriptional regulator, LysR family n=2 Tax=R... 175 1e-42 UniRef50_A8TTL8 Transcriptional Regulator, LysR family protein n... 175 2e-42 UniRef50_C9Y5B3 Putative uncharacterized protein n=1 Tax=Cronoba... 175 2e-42 UniRef50_P52676 Carbapenem-hydrolyzing beta-lactamase transcript... 175 2e-42 UniRef50_C3K0C2 Putative LysR family regulatory protein n=1 Tax=... 174 3e-42 UniRef50_A9BQB4 Transcriptional regulator, LysR family n=7 Tax=C... 174 4e-42 UniRef50_B9JNL4 Transcriptional regulator protein n=1 Tax=Agroba... 174 4e-42 UniRef50_A3Y684 Transcriptional Regulator, LysR family protein n... 174 4e-42 UniRef50_Q2BME1 Transcriptional regulator, LysR family protein n... 173 6e-42 UniRef50_A3SQ37 Probable transcription regulator protein n=1 Tax... 173 7e-42 UniRef50_A1WKP4 Transcriptional regulator, LysR family n=1 Tax=V... 173 8e-42 UniRef50_Q5WIP7 LysR family transcriptional regulator n=2 Tax=Ba... 172 1e-41 UniRef50_Q21FP2 LysR, substrate-binding n=1 Tax=Saccharophagus d... 172 2e-41 UniRef50_C9P538 Transcriptional regulator n=1 Tax=Vibrio metschn... 171 3e-41 UniRef50_B7QWK5 Transcriptional regulator, LysR family n=1 Tax=R... 171 3e-41 UniRef50_UPI000190906C chromosome replication initiation inhibit... 170 6e-41 UniRef50_D2BWA2 Transcriptional regulator, LysR family n=1 Tax=D... 170 7e-41 UniRef50_A0B3J6 Transcriptional regulator, LysR family n=33 Tax=... 169 8e-41 UniRef50_D2T424 Carbapenem-hydrolyzing beta-lactamase transcript... 169 8e-41 UniRef50_Q11LB7 Transcriptional regulator, LysR family n=1 Tax=C... 169 1e-40 UniRef50_A6D585 Transcriptional regulator n=5 Tax=Vibrionales Re... 168 1e-40 UniRef50_B9TIZ9 Chromosome initiation inhibitor, putative n=1 Ta... 167 3e-40 UniRef50_Q7W6A4 Putative LysR-family transcriptional regulator n... 167 3e-40 UniRef50_B2VHX3 LysR-family transcriptional regulator n=2 Tax=En... 167 3e-40 UniRef50_A9I5L1 Transcriptional regulator, LysR-family n=3 Tax=P... 167 3e-40 UniRef50_Q123P6 Transcriptional regulator, LysR family n=1 Tax=P... 167 3e-40 UniRef50_D0YXG6 D-serine dehydratase transcriptional activator n... 167 4e-40 UniRef50_A4XUE8 Transcriptional regulator, LysR family n=3 Tax=c... 167 4e-40 UniRef50_Q218F8 Transcriptional regulator, LysR family n=12 Tax=... 167 4e-40 UniRef50_Q11AM5 Transcriptional regulator, LysR family n=1 Tax=C... 167 5e-40 UniRef50_Q30Z73 Transcriptional regulator, LysR family n=3 Tax=D... 167 5e-40 UniRef50_P30864 Uncharacterized HTH-type transcriptional regulat... 166 7e-40 UniRef50_A9D6M6 Transcriptional regulator, LysR family protein n... 165 2e-39 UniRef50_A4F1D5 Transcriptional activator AmpR n=1 Tax=Roseobact... 164 4e-39 UniRef50_A3JQF3 Transcriptional regulator, LysR family protein n... 163 7e-39 UniRef50_C6BDS6 Transcriptional regulator, LysR family n=3 Tax=R... 163 8e-39 UniRef50_Q7CZE6 Transcriptional regulator, LysR family n=1 Tax=A... 162 1e-38 UniRef50_C7QF45 Transcriptional regulator, LysR family n=1 Tax=C... 162 2e-38 UniRef50_Q0K5L3 Transcriptional regulator, LysR-family n=5 Tax=B... 161 2e-38 UniRef50_P24734 HTH-type transcriptional activator ampR n=112 Ta... 161 2e-38 UniRef50_A3X9D4 Transcriptional regulator n=3 Tax=Rhodobacterale... 161 3e-38 UniRef50_A9F8M5 LysR-family transcriptional regulator n=1 Tax=So... 161 3e-38 UniRef50_P77333 Uncharacterized HTH-type transcriptional regulat... 161 3e-38 UniRef50_A0P0B3 Transcriptional regulator n=1 Tax=Labrenzia aggr... 161 3e-38 Sequences not found previously or not previously below threshold: UniRef50_A8TN53 Transcriptional regulator, LysR family protein n... 201 3e-50 UniRef50_B3R274 Transcriptional regulator of glycine cleavage sy... 199 9e-50 UniRef50_Q2CJD7 Putative uncharacterized protein n=1 Tax=Oceanic... 191 3e-47 UniRef50_A6VVZ6 Transcriptional regulator, LysR family n=3 Tax=G... 189 9e-47 UniRef50_Q7MF54 Transcriptional regulator n=20 Tax=Proteobacteri... 189 1e-46 UniRef50_A0K446 Transcriptional regulator, LysR family n=12 Tax=... 185 2e-45 UniRef50_A4F096 Transcriptional regulator, LysR family protein n... 184 3e-45 UniRef50_D0IY54 Transcriptional regulator, LysR family n=1 Tax=C... 183 7e-45 UniRef50_A8HSF9 Transcriptional regulator n=8 Tax=Proteobacteria... 182 1e-44 UniRef50_C5CR23 Transcriptional regulator, LysR family n=1 Tax=V... 181 3e-44 UniRef50_Q0HTP8 Transcriptional regulator, LysR family n=19 Tax=... 180 5e-44 UniRef50_Q2RS80 Transcriptional regulator, LysR family n=3 Tax=A... 180 6e-44 UniRef50_Q2W945 Transcriptional regulator n=2 Tax=Magnetospirill... 179 8e-44 UniRef50_C3K213 Putative LysR-family regulatory protein n=1 Tax=... 179 2e-43 UniRef50_Q5DYL0 Transcriptional regulator, LysR family n=2 Tax=V... 178 2e-43 UniRef50_C5D189 Transcriptional regulator, LysR family n=4 Tax=P... 178 2e-43 UniRef50_A3UHF6 Transcriptional regulatory protein n=2 Tax=Rhodo... 178 2e-43 UniRef50_P45099 Glycine cleavage system transcriptional activato... 178 2e-43 UniRef50_A9M598 Transcriptional regulator, LysR family n=45 Tax=... 178 3e-43 UniRef50_C3K1T6 Putative LysR-family transcriptional regulator n... 177 4e-43 UniRef50_A6T0X1 Transcriptional regulator, LysR family, glycine ... 177 5e-43 UniRef50_B8H3M0 Transcriptional regulator, LysR family n=12 Tax=... 177 6e-43 UniRef50_C0Z518 Transcriptional regulator n=3 Tax=Paenibacillace... 176 9e-43 UniRef50_A4BIQ6 Transcriptional regulator, LysR family protein n... 175 2e-42 UniRef50_Q145M0 Transcriptional regulator, LysR family n=15 Tax=... 175 2e-42 UniRef50_A5V722 Transcriptional regulator, LysR family n=22 Tax=... 175 2e-42 UniRef50_A3X5F2 Probable transcriptional regulator n=1 Tax=Roseo... 175 2e-42 UniRef50_B1KBZ9 Transcriptional regulator, LysR family n=33 Tax=... 174 3e-42 UniRef50_C5SQF2 Transcriptional regulator, LysR family n=1 Tax=A... 174 3e-42 UniRef50_C7CHT6 Transcriptional regulator, LysR family n=3 Tax=M... 174 4e-42 UniRef50_Q5VM55 Putative LysR-type transcriptional regulator n=1... 173 6e-42 UniRef50_A9CIB6 Transcriptional regulator, LysR family n=2 Tax=A... 173 8e-42 UniRef50_A9AEG5 LysR family glycine cleavage system transcriptio... 173 8e-42 UniRef50_C6P3G3 Transcriptional regulator, LysR family n=1 Tax=S... 172 1e-41 UniRef50_D1P1L2 Transcriptional regulator, LysR family n=3 Tax=P... 172 1e-41 UniRef50_Q0F1H8 Transcriptional regulatory protein n=1 Tax=Marip... 172 1e-41 UniRef50_A3D4V0 Putative uncharacterized protein n=1 Tax=Shewane... 172 2e-41 UniRef50_C1DBD5 Transcriptional regulator, LysR family n=1 Tax=L... 172 2e-41 UniRef50_C6C726 Transcriptional regulator, LysR family n=17 Tax=... 172 2e-41 UniRef50_D1SS36 Transcriptional regulator, LysR family n=1 Tax=A... 171 3e-41 UniRef50_B5WPF6 Transcriptional regulator, LysR family n=3 Tax=P... 171 3e-41 UniRef50_B5WKQ0 Transcriptional regulator, LysR family n=5 Tax=P... 170 4e-41 UniRef50_A8TRJ4 Transcriptional regulator, LysR family protein n... 170 4e-41 UniRef50_B2U8C9 Transcriptional regulator, LysR family n=27 Tax=... 170 4e-41 UniRef50_A4XWR7 Transcriptional regulator, LysR family n=57 Tax=... 170 6e-41 UniRef50_A3JF22 Putative LysR-family transcriptional regulator n... 170 7e-41 UniRef50_A3SJ26 Transcriptional regulator, LysR family protein n... 169 8e-41 UniRef50_Q391C1 Transcriptional regulator, LysR family n=5 Tax=B... 169 8e-41 UniRef50_B1J9I9 Transcriptional regulator, LysR family n=15 Tax=... 169 9e-41 UniRef50_C4LCQ0 Transcriptional regulator, LysR family n=1 Tax=T... 169 1e-40 UniRef50_B5J5W4 LysR substrate binding domain protein n=2 Tax=Al... 168 2e-40 UniRef50_A8TZX1 Fumarate hydratase n=1 Tax=alpha proteobacterium... 168 2e-40 UniRef50_C9NUL4 D-serine dehydratase transcriptional activator n... 168 2e-40 UniRef50_Q161D2 Transcriptional regulator, LysR family, putative... 168 2e-40 UniRef50_D1RRX4 Transcriptional regulatory protein n=2 Tax=Enter... 167 3e-40 UniRef50_A1B2P4 Transcriptional regulator, LysR family n=2 Tax=P... 167 4e-40 UniRef50_P12529 HTH-type transcriptional activator ampR n=19 Tax... 167 5e-40 UniRef50_A8GAZ3 Transcriptional regulator, LysR family n=3 Tax=P... 167 5e-40 UniRef50_Q0K3U7 Transcriptional regulator, LysR-family n=1 Tax=R... 167 5e-40 UniRef50_B7KPE2 Transcriptional regulator, LysR family n=26 Tax=... 167 6e-40 UniRef50_C5AIJ9 Transcriptional regulator, LysR family protein n... 166 8e-40 UniRef50_Q2SHX6 Transcriptional regulator n=2 Tax=Oceanospirilla... 166 9e-40 UniRef50_A0KG02 Transcriptional regulators, LysR family n=3 Tax=... 165 1e-39 UniRef50_A5V568 Transcriptional regulator, LysR family n=1 Tax=S... 165 1e-39 UniRef50_C6DEW9 Transcriptional regulator, LysR family n=4 Tax=P... 165 2e-39 UniRef50_Q39AZ7 Transcriptional regulator, LysR family n=2 Tax=P... 165 2e-39 UniRef50_B3RAJ7 Putative transcriptional regulator, LysR family ... 165 2e-39 UniRef50_A4XNC3 Transcriptional regulator, LysR family n=23 Tax=... 165 2e-39 UniRef50_B4EPZ1 LysR family regulatory protein n=8 Tax=Proteobac... 165 2e-39 UniRef50_D1P0T8 Transcriptional activator AmpR n=1 Tax=Providenc... 165 2e-39 UniRef50_C5AEG0 Transcriptional regulator, LysR family protein n... 164 3e-39 UniRef50_B2T5C1 Transcriptional regulator, LysR family n=50 Tax=... 164 3e-39 UniRef50_B9Z1E8 Transcriptional regulator, LysR family n=1 Tax=L... 164 3e-39 UniRef50_A3K624 Transcriptional regulator, LysR family protein n... 164 4e-39 UniRef50_C5AJX7 Transcriptional regulator, LysR family protein n... 163 4e-39 UniRef50_C7RIQ1 Transcriptional regulator, LysR family n=1 Tax=C... 163 5e-39 UniRef50_Q2CH16 Probable transcription regulator protein n=1 Tax... 163 5e-39 UniRef50_B6BBP1 Transcriptional regulator n=1 Tax=Rhodobacterale... 163 6e-39 UniRef50_C6QF64 Transcriptional regulator, LysR family n=1 Tax=H... 163 7e-39 UniRef50_C3KRQ9 Transcriptional regulator, LysR family n=1 Tax=R... 163 8e-39 UniRef50_A1B0V2 Transcriptional regulator, LysR family n=2 Tax=c... 163 8e-39 UniRef50_A0NTX9 LysR family transcriptional regulatory protein n... 163 9e-39 UniRef50_Q1GID9 Transcriptional regulator, LysR family n=5 Tax=R... 163 9e-39 UniRef50_A6VT77 Transcriptional regulator, LysR family n=2 Tax=M... 163 9e-39 UniRef50_A9HF00 Transcriptional regulator protein n=1 Tax=Glucon... 162 1e-38 UniRef50_B9JLT3 Transcriptional regulator protein n=2 Tax=Rhizob... 162 1e-38 UniRef50_A5G323 Transcriptional regulator, LysR family n=1 Tax=A... 162 1e-38 UniRef50_C8QAF0 Transcriptional regulator, LysR family n=1 Tax=P... 162 1e-38 UniRef50_B8J293 Transcriptional regulator, LysR family n=1 Tax=D... 162 1e-38 UniRef50_Q0G2U4 Transcriptional regulator, LysR family protein n... 162 1e-38 UniRef50_B5XWH9 Transcriptional regulator, LysR family n=10 Tax=... 162 1e-38 UniRef50_C4LDC5 Transcriptional regulator, LysR family n=1 Tax=T... 162 2e-38 UniRef50_B7H4B0 LysR substrate binding domain protein n=10 Tax=G... 162 2e-38 UniRef50_Q1QZK3 Transcriptional regulator, LysR family n=1 Tax=C... 162 2e-38 UniRef50_A6SUS7 Transcriptional regulator n=3 Tax=Proteobacteria... 162 2e-38 UniRef50_Q1GMA2 Transcriptional regulator, LysR family n=2 Tax=R... 161 2e-38 UniRef50_A8GEV9 Transcriptional regulator, LysR family n=22 Tax=... 161 3e-38 UniRef50_B1G1M3 Transcriptional regulator, LysR family n=1 Tax=B... 161 3e-38 UniRef50_B5ZZ47 Transcriptional regulator, LysR family n=4 Tax=R... 161 3e-38 UniRef50_P55576 Uncharacterized HTH-type transcriptional regulat... 161 3e-38 UniRef50_C8QG37 Transcriptional regulator, LysR family n=1 Tax=P... 161 3e-38 UniRef50_Q7P212 Glycine cleavage activator protein n=1 Tax=Chrom... 161 3e-38 UniRef50_A5VAW9 Transcriptional regulator, LysR family n=1 Tax=S... 161 3e-38 UniRef50_Q1GH77 Transcriptional regulator, LysR family n=18 Tax=... 160 4e-38 >UniRef50_A7FF10 Chromosome initiation inhibitor n=169 Tax=Gammaproteobacteria RepID=ICIA_YERP3 Length = 302 Score = 376 bits (965), Expect = e-103, Method: Composition-based stats. Identities = 273/297 (91%), Positives = 281/297 (94%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLEN+FGQPLLVRTVPPRPT Sbjct: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENLFGQPLLVRTVPPRPT 60 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 EQGQKLLALL QVELLEEEWLG++ TPLLLSLAVNADSLATWLLPAL PVLAD PIR Sbjct: 61 EQGQKLLALLHQVELLEEEWLGNDNGVDTPLLLSLAVNADSLATWLLPALKPVLADLPIR 120 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 LNLQVEDETRTQERLRRGEVVGAVSIQ Q LPSCLVD+LGALDYLFV+SK FAE+YFPNG Sbjct: 121 LNLQVEDETRTQERLRRGEVVGAVSIQPQPLPSCLVDQLGALDYLFVASKAFAERYFPNG 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 VTRSALLKAP VAFDHLDDMHQAFLQQNFDL PGSVPCHIVNSSEAFVQLARQGTTCCMI Sbjct: 181 VTRSALLKAPAVAFDHLDDMHQAFLQQNFDLSPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 PHLQIEKELASGELIDLTPGL QRRML+WHRFAPESR MRKVTDALL YG +VLRQD Sbjct: 241 PHLQIEKELASGELIDLTPGLLQRRMLFWHRFAPESRTMRKVTDALLSYGRQVLRQD 297 >UniRef50_Q7MHL5 Chromosome initiation inhibitor n=55 Tax=Vibrionaceae RepID=ICIA_VIBVY Length = 298 Score = 296 bits (758), Expect = 6e-79, Method: Composition-based stats. Identities = 140/296 (47%), Positives = 197/296 (66%), Gaps = 2/296 (0%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 M+ DY+ ++ALDAV+ + GFERAA++L I+QSAVSQRIKQLE Q +L+R PP+PT Sbjct: 1 MRGLDYKWIEALDAVVAQGGFERAAEELYISQSAVSQRIKQLERFLAQSVLIREQPPKPT 60 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGST--PLLLSLAVNADSLATWLLPALAPVLADSP 118 G+KLL L R+V +LE E + + T P+ L+LA NADSLATWLLPAL V+ Sbjct: 61 PVGKKLLGLYRRVRILEHELIPELMNDDTAKPIQLALATNADSLATWLLPALKEVMTQRQ 120 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 + LNL + E+R+ E+L+ GEV GA+S++ Q + C D LG +DY+ V+S F ++YF Sbjct: 121 VELNLAIYGESRSIEKLKSGEVAGAISLESQPIAGCKADYLGRMDYVCVASPDFYQRYFA 180 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 GV L KAP V++D DD+H FL +F++ S+ H V SSEAFV+LA G C Sbjct: 181 AGVNYQTLRKAPAVSYDQYDDLHNRFLHDHFNISRDSIINHNVGSSEAFVRLAVSGIAYC 240 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 +IP LQIE+ELASG L+D+TPG +YWH + ES ++++++ A++ Y L Sbjct: 241 LIPKLQIEQELASGVLMDITPGFLLSYRIYWHHWQLESGVLKEISQAIVQYAQAHL 296 >UniRef50_P70773 Chromosome initiation inhibitor n=6 Tax=Gammaproteobacteria RepID=ICIA_AERSA Length = 299 Score = 293 bits (749), Expect = 6e-78, Method: Composition-based stats. Identities = 154/297 (51%), Positives = 200/297 (67%), Gaps = 2/297 (0%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 MK DY+ L ALDAV++E+ FERAAQ+L ITQSA+SQRIKQLE F +PLL+R+ P + T Sbjct: 1 MKALDYKLLLALDAVMQEQNFERAAQRLHITQSAISQRIKQLEQQFAEPLLIRSQPLQAT 60 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQT--GSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 GQKLLA RQV LE E G+ P+ +S+AVNADSLATW LPALAP+L P Sbjct: 61 PLGQKLLAHYRQVRQLELELAGEIAPDEPQAPIRVSIAVNADSLATWFLPALAPLLEQHP 120 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 I LNL V+DE RT +R+R G+ GAVS+ Q L C VD+LG + YL +S F ++FP Sbjct: 121 IELNLLVDDECRTLDRVREGQAFGAVSLHGQPLAGCCVDELGEMRYLLTASPAFVARHFP 180 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 G+T +AL K P VAFD DDMH +F+ ++F L PG PCH V SSEAFV +A QG C Sbjct: 181 AGLTPAALAKTPAVAFDQRDDMHVSFMARHFGLEPGGYPCHTVRSSEAFVAMAEQGLAYC 240 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 +IP LQI ++LA G L+DL+P LYWHR+ E + ++++ L+ G + L+ Sbjct: 241 LIPELQIRQQLAQGILLDLSPSHHLIEPLYWHRWVLERGLHKQISQRLISEGRRALQ 297 >UniRef50_Q2BJ31 Chromosome replication initiation inhibitor protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJ31_9GAMM Length = 297 Score = 293 bits (749), Expect = 7e-78, Method: Composition-based stats. Identities = 115/294 (39%), Positives = 174/294 (59%), Gaps = 2/294 (0%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 DY+ LQAL A++ E F+RAA +L I+QSAVSQR+KQLE+ GQ L++R P + T Sbjct: 1 MIDYKQLQALAAILEEDSFDRAADRLHISQSAVSQRLKQLEDSIGQTLIIRGNPLQATPA 60 Query: 63 GQKLLALLRQVELLEEEWLGDE--QTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 GQ+LL RQV LL++E + + +++ +NADSLATW L A+ P+L + I Sbjct: 61 GQQLLKHFRQVSLLQDELHEELSLKQADGYTQIAIGLNADSLATWFLDAVQPLLNEEKIL 120 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L L+V+D+ +T L+ G+V+G +S + + C LG + Y ++S + KYFP+G Sbjct: 121 LELKVDDQDQTHHLLKSGQVIGCISSNPKPMQGCNCIPLGIMAYRCLASPCYLAKYFPDG 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 V APV F + D++ +L++ F + P P H + S+E+F QL +G C MI Sbjct: 181 VNSEGFRHAPVAEFSNKDELQNRYLEKFFKIGPNEYPKHRIPSTESFFQLIIRGLACGMI 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 P Q + LA+G +IDLTPG + LYWH ++ +S + K+T L +VL Sbjct: 241 PDQQSHELLANGTVIDLTPGKYLEIPLYWHIWSLKSDLYDKLTRKLTKQAWQVL 294 >UniRef50_Q47WN2 Chromosome initiation inhibitor n=2 Tax=Alteromonadales RepID=Q47WN2_COLP3 Length = 298 Score = 285 bits (730), Expect = 1e-75, Method: Composition-based stats. Identities = 131/297 (44%), Positives = 187/297 (62%), Gaps = 2/297 (0%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 M DY+ L AL VI + FE AAQKL I+QSA+SQRIK LE GQP+L+R P T Sbjct: 1 MANFDYKLLAALAEVIELQSFELAAQKLFISQSAISQRIKALEEHVGQPVLIRNQPIVAT 60 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGS--TPLLLSLAVNADSLATWLLPALAPVLADSP 118 G++LL+ ++V+ LE E + P+ +SLAVNADS+ATW + A+ PVL + Sbjct: 61 PAGEQLLSHFKKVKQLEHELVPLLSPDQPIKPMKISLAVNADSIATWFIDAITPVLKNHL 120 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 + LNL +E E RT ++LR G+ +GAVS + L KLG ++Y V+SK FA+KYFP Sbjct: 121 VELNLIIEHEERTLDKLRSGQAIGAVSTIEKPLKGYRSFKLGEMEYCLVASKAFAKKYFP 180 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 GV +++L AP +++DH DDMH ++ ++F+L CH V SSEAF+ LA+QG C Sbjct: 181 EGVNQNSLKMAPAISYDHKDDMHVRYIARHFNLAASEYYCHSVRSSEAFIPLAKQGVAYC 240 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 +IP LQIE+EL +G+LI L PG LYWH + + +K+++ ++ G + L Sbjct: 241 LIPKLQIEQELIAGQLISLCPGKELVETLYWHSWVLVKGVNKKISEQIVSIGREKLA 297 >UniRef50_B8FDR1 Transcriptional regulator, ArgP, LysR family n=2 Tax=Desulfobacteraceae RepID=B8FDR1_DESAA Length = 298 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 167/296 (56%), Gaps = 2/296 (0%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 DY+ L+AL AV++E GFE+AA +L ITQSAVSQR+K LE+ GQ L+VRT PPR T Sbjct: 1 MLDYKLLEALAAVVQEGGFEKAAARLHITQSAVSQRVKLLEDQAGQVLMVRTSPPRATPA 60 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPL--LLSLAVNADSLATWLLPALAPVLADSPIR 120 G++++ QV LEE+ + L+L +N DSL+TW LPA+ L + Sbjct: 61 GRQMIKHYLQVNRLEEDLKESLDLTGQDVFTTLALGINGDSLSTWFLPAVRDFLIRERLL 120 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L+L+ +D+ T + LR GEV+G +S+Q + + CL++ LG +DY ++S +A K+FP G Sbjct: 121 LDLRGDDQDETHKMLRDGEVIGCISVQDRPMQGCLMEYLGRMDYRLIASPEYAAKWFPEG 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + + KAP F+ D +H P +P H + SSE FV G M+ Sbjct: 181 MNLESASKAPFFIFNRKDHLHYKMFPLALGEVPTPLPAHYLPSSEQFVSFIEAGLGYGML 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 P Q ++ L +G L+DL P LYWH + S ++ + T L+ ++L+Q Sbjct: 241 PDQQSKELLEAGLLVDLAPSHIVPVHLYWHCWNLSSALLERFTRHLVRKARRILQQ 296 >UniRef50_Q7NUX8 Inhibitor of chromosome initiation IciA n=2 Tax=Chromobacterium group RepID=Q7NUX8_CHRVO Length = 312 Score = 276 bits (706), Expect = 6e-73, Method: Composition-based stats. Identities = 122/298 (40%), Positives = 177/298 (59%), Gaps = 4/298 (1%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 D R LQ L AV GF++AA+KL +TQSAVSQRI+QLE GQP+L RT P TE Sbjct: 1 MFDPRQLQTLAAVAETGGFDKAAKKLFLTQSAVSQRIRQLEEQLGQPVLTRTSPAEATEA 60 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPL---LLSLAVNADSLATWLLPALAPVLADSPI 119 G++LL +Q+ L+E + L L++ VNADSLATW L A+ PVL + Sbjct: 61 GRQLLRHYQQLLLMENQLLQKLSPAPRQREFTTLAVGVNADSLATWYLQAVTPVLEAHDL 120 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 L++ V+D+ T E +R G V+G VS + + + + LGA+ YL +++ FA ++FP+ Sbjct: 121 LLDVVVDDQDHTHELMRTGHVMGCVSTRPVPIQTGVQHYLGAMRYLCLATPRFAARHFPD 180 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 GV +AL +AP + F D +H FL+Q G P V S++ FV+L RQG + Sbjct: 181 GVDHAALARAPSIIFSRKDAVHGQFLRQAIGYE-GGFPSFTVPSAQGFVELTRQGVAYSL 239 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 +P L ++ +L G L+DL PG + LYWH + ES + + +T+A+LDY + LRQD Sbjct: 240 LPELMLDGDLEDGRLVDLFPGQYMDLPLYWHHWRVESELSQALTEAMLDYCGRHLRQD 297 >UniRef50_C1D4J6 IciA n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D4J6_LARHH Length = 297 Score = 275 bits (703), Expect = 1e-72, Method: Composition-based stats. Identities = 118/295 (40%), Positives = 167/295 (56%), Gaps = 2/295 (0%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 DY+ L AL+AV++ F++AA LCIT SAVSQRI+QLE GQ LL+R++P R T Sbjct: 1 MFDYKLLTALEAVVKAGSFDKAAALLCITPSAVSQRIRQLEERTGQLLLIRSLPVRATAA 60 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLL--LSLAVNADSLATWLLPALAPVLADSPIR 120 G +LL +RQV LLEE+ + Q + L L + VNADSL TWLLPA+A V+ Sbjct: 61 GHRLLRHVRQVALLEEDLQQELQGEAEGGLTPLPVGVNADSLGTWLLPAVAKVVWRERFV 120 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L V+DE T + LR GEVVG V+ Q C+ LG + Y F ++ F + P+G Sbjct: 121 LQAIVDDEAHTHDLLRSGEVVGCVTSHPQPPTGCISQPLGQMRYRFYATPDFVRNHLPDG 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 +TR A+L P +AF+ D +H ++ F L G P + S+ A + + G + Sbjct: 181 LTREAVLATPGIAFNRKDSLHFGQMEARFGLRLGDYPYLTMPSTHALFEAVKAGLGYGLS 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 P LQ+ + LASGE+IDL P L+WH +A +S + + T L+ + LR Sbjct: 241 PELQVGEALASGEVIDLLPDDPPSVSLFWHGWALQSPRLARFTATLVAEARQRLR 295 >UniRef50_C6BY65 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BY65_DESAD Length = 294 Score = 274 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 109/286 (38%), Positives = 162/286 (56%), Gaps = 2/286 (0%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLA 68 L+AL AVI E GF++AA KL I+QSAVSQRI+ E G+ L+VR PP PTE G+KL+ Sbjct: 7 LEALAAVIEEGGFDKAALKLNISQSAVSQRIRNFEEQLGRVLVVRATPPEPTEDGRKLIK 66 Query: 69 LLRQVELLEEEWLGD--EQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVE 126 L + L+E + + L + VNADSLATW L AL L + + L+L V+ Sbjct: 67 HLHTIRLMEHDLNDSMGLNPSGEFVTLPVGVNADSLATWFLDALDGFLKEHNVLLDLYVD 126 Query: 127 DETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSAL 186 DE RT E L RGEVVG + + + C D L DYL +S+ F +++F +G R ++ Sbjct: 127 DENRTHEMLARGEVVGCIGTVSKPVKGCRSDYLATFDYLCLSTPDFYKRWFKDGFNRESV 186 Query: 187 LKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIE 246 KAP F+ D+ L++ F + P + S+E+FV + + M+P Q+E Sbjct: 187 AKAPAAVFNRKDETQSQMLEKLFPGDSVAHPIFYIPSTESFVDIICRELAYGMVPEFQVE 246 Query: 247 KELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHK 292 +EL SG+LI++ P LYWH + E++++ + L+ Y +K Sbjct: 247 EELKSGQLIEVAPQGRVPVSLYWHSWNVETKLLEGLRRELVGYFNK 292 >UniRef50_Q0I356 Chromosome initiation inhibitor n=6 Tax=Gammaproteobacteria RepID=Q0I356_HAES1 Length = 295 Score = 272 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 133/294 (45%), Positives = 190/294 (64%), Gaps = 3/294 (1%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 M R DY ++ +D +I+E G +AA KL I+QSAVSQRIK E G+ +L+RTVPPRPT Sbjct: 1 MIRVDYEAIRLIDLIIKEGGVGKAATKLDISQSAVSQRIKVFERSLGELVLMRTVPPRPT 60 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 GQKLL LL V L+E + LG + + + +++N DSLA W L + L + I+ Sbjct: 61 ALGQKLLTLLHHVSLIEHDLLGKKG---EIIEIPISINMDSLAIWFLSVIKDFLENPLIK 117 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 N+ V++E +T L GEVVGA+S Q + + D +G+LDY+ +S FA++YFP G Sbjct: 118 FNINVDNENKTLNSLLNGEVVGAISSQSKPIIGGKCDYIGSLDYVLAASPAFAQRYFPRG 177 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 VT+ ALLKAP+++F+ +D HQ FLQQ F + G++ H+V SSEA+VQL + CCMI Sbjct: 178 VTKEALLKAPIISFNKNEDSHQIFLQQFFGIAEGNLLSHVVPSSEAYVQLVLENVACCMI 237 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 P QI ELA+ +I+L P L QR+ LYWHR+ +S +M ++T+A+L L Sbjct: 238 PKQQIALELANNRIINLVPELLQRKKLYWHRYELKSTIMDRLTEAILSNAAHYL 291 >UniRef50_C4KCF0 Transcriptional regulator, ArgP, LysR family n=1 Tax=Thauera sp. MZ1T RepID=C4KCF0_THASP Length = 303 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 126/294 (42%), Positives = 175/294 (59%), Gaps = 4/294 (1%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 D+R L A +AV++E GFERAA++L +TQSAVSQR+K LE GQ LLVR+ P RPT Sbjct: 1 MIDHRLL-AFEAVLQEGGFERAARRLALTQSAVSQRVKLLEAELGQVLLVRSKPVRPTPA 59 Query: 63 GQKLLALLRQVELLEEEWLGDEQTG--STPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G++LL L Q+ L+E E PL L++ VNADSLATW + A+A V+ D I Sbjct: 60 GRRLLPYLAQLRLMEAEARRALSPREVDGPLRLAVGVNADSLATWFIGAVAEVVRDEGIV 119 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L+ V+D+ T L GEV+G VS + + C +LGA+ YL S F ++FP G Sbjct: 120 LDCVVDDQDHTHALLADGEVLGCVSTRADPMRGCAAVRLGAMPYLCAGSPDFRARWFPQG 179 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 +T +AL +AP + F H DDMH+AFL ++F L P H+V SSE F+ A G + Sbjct: 180 LTPAALARAPAIVFGHHDDMHEAFLLRHFGLDSRRYPHHVVPSSEGFMAFALAGLGYGFV 239 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 P +Q LA GEL+DL P + +LYWH + +S +M ++ A+ D + L Sbjct: 240 PEIQARAHLARGELVDLAPE-REEVVLYWHHWQVQSPVMARLAQAIGDAAGRAL 292 >UniRef50_B1Y350 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=B1Y350_LEPCP Length = 300 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 108/299 (36%), Positives = 159/299 (53%), Gaps = 5/299 (1%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 D + L+AL AV+RE FERAA+++ +T SAVSQRI+ LE G LLVRT P TE+ Sbjct: 2 MLDLQALRALAAVLREGSFERAARQMHVTPSAVSQRIRALEERLGCVLLVRTSPVTATEE 61 Query: 63 GQKLLALLRQVELLEEEWLGDEQ-----TGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 G +L Q+E+LE + D Q + +AVNADSLATW++PALA A S Sbjct: 62 GARLYLHFLQIEVLEADLARDLQPLGDAASRRGRSIRVAVNADSLATWVIPALADFHARS 121 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 + L V+D+ T+E LR G V AV+ + + C VD LG++ Y +S FA++YF Sbjct: 122 GDTVALHVDDQDHTREWLRSGTVFAAVTAASEPVAGCRVDPLGSMRYCAAASPEFAKRYF 181 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 ++A +AP++ F+ D + FL + P + S+ AF+ AR G Sbjct: 182 EARDLQAAFSEAPMLVFNQKDQLQHRFLNELLGDADPHPPVWWLPSTHAFLDAARAGLGW 241 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 + P + +LASG L+DL+PG L+W + +S + + +L L Q Sbjct: 242 GLHPLPLVADDLASGRLVDLSPGHSLDVPLFWQSWRLDSETVHTLRSCMLRAAEGALLQ 300 >UniRef50_A3D5N6 Transcriptional regulator, LysR family n=18 Tax=Shewanella RepID=A3D5N6_SHEB5 Length = 311 Score = 266 bits (681), Expect = 5e-70, Method: Composition-based stats. Identities = 117/310 (37%), Positives = 166/310 (53%), Gaps = 16/310 (5%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 +Y L+AL V+ E GF+RAA+ L ITQSAVSQRI+QLE GQ LL+R+ P T Sbjct: 1 MLEYANLKALAVVVSEGGFDRAAKVLHITQSAVSQRIRQLEEKVGQSLLIRSNPVVATPT 60 Query: 63 GQKLLALLRQVELLEEEWLG--DEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G++LL QV+LLE E D + P + +AVNADSLATW LPALA + + Sbjct: 61 GKRLLRHYSQVQLLESELRAEMDADDPNHPTTVRIAVNADSLATWFLPALAGMFSRHAWL 120 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF--- 177 L L V+DE+ T L+ GE VG V+ + C + LG ++YL V++ FA +YF Sbjct: 121 LELIVDDESYTHHLLKNGEAVGCVTTTEVPMAGCSSEFLGTMEYLCVATPEFAARYFGEP 180 Query: 178 -----------PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEA 226 N ++++ L KAP V F D +H+ FL Q F++ PG H + SSE+ Sbjct: 181 SDSKSLSDTQPSNDISQAQLAKAPAVVFSTKDKLHEKFLAQYFNMTPGQWWQHTIPSSES 240 Query: 227 FVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDAL 286 F++ ++ HLQ + + G LI+LTP R L+W + +++ V AL Sbjct: 241 FLEAINLSLGYGLVGHLQAKPLIDRGILIELTPERRMRVPLFWQHWNIKAKQTTLVYRAL 300 Query: 287 LDYGHKVLRQ 296 L Q Sbjct: 301 AVTAQHNLLQ 310 >UniRef50_C3JN11 Transcriptional regulator, LysR family n=2 Tax=Rhodococcus erythropolis RepID=C3JN11_RHOER Length = 297 Score = 263 bits (673), Expect = 5e-69, Method: Composition-based stats. Identities = 108/297 (36%), Positives = 161/297 (54%), Gaps = 6/297 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 D+ L+AL A + E FE AA+KL IT SAVSQRIK LE G+ L+ RT P R T+ Sbjct: 1 MLDFEQLRALHAAVDEGTFEAAARKLHITPSAVSQRIKGLETSVGRILVQRTKPIRVTDS 60 Query: 63 GQKLLALLRQVELLEEEW---LGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 G+++L L RQ++ L + LG E +S+AVNADSL+TW+L ALA + + Sbjct: 61 GREVLRLARQIDALSRDTVRELGLENGSGMFARVSIAVNADSLSTWVLGALAEFTQE--V 118 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 + ++D+ T E LR G V+ AV+ + C +LG + Y ++S F ++F + Sbjct: 119 GFDFHLDDQDHTTELLRDGSVMAAVTSVASPIQGCTSSRLGIMRYRPMASAEFCRRWFAD 178 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 GVT +L +AP+V F+ D + +L Q P P H+V SS F R+G + Sbjct: 179 GVTAESLSEAPLVVFNRKDLLQDRYLDQKVG-HPADPPRHLVPSSADFADAVRRGYGWGL 237 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 IP LQ + SG LI P LYW ++ S ++R++++ + H+VL Q Sbjct: 238 IPDLQRGDDDRSGVLIGFDPDFVDDVPLYWQQWKLSSPVLRRISEVVTRRAHEVLHQ 294 >UniRef50_D0STT3 DnaA/argK transcriptional regulator n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0STT3_ACILW Length = 301 Score = 262 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 99/297 (33%), Positives = 148/297 (49%), Gaps = 3/297 (1%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 + + A AV + F+ AA++L IT SAV+ R++ LE GQ LLVR P R T+ Sbjct: 1 MLNAKQCDAFYAVAKTGSFDLAAEQLNITASAVTLRVQSLEKKLGQLLLVRDRPCRVTQS 60 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTP---LLLSLAVNADSLATWLLPALAPVLADSPI 119 GQ LL L+ LLE+ + D L++A NADSLATWLLP L L I Sbjct: 61 GQTLLHYLQHQRLLEQNLMQDLGGQLQQEGFYCLNIATNADSLATWLLPTLQAQLIQHKI 120 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 L+ QV+D+++T L G V +S + +A+ C + +G + Y V++ F+ +FP Sbjct: 121 VLHFQVDDQSQTHHLLEAGLVNACLSTEAKAMKGCRAELIGQMQYRLVATPDFSRNWFPQ 180 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 GV R AL AP + F+ D +H F+Q F L P + S+ AF G Sbjct: 181 GVHRDALRLAPAIIFNEKDQLHTQFIQHEFGLNLAQYPHFFIPSTHAFFDAIVMGLGYGW 240 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 +P Q L SG L++L+ + LYWH + +S + + + L + + Q Sbjct: 241 LPDYQTRDLLESGRLLELSSEMRIEVPLYWHHWKEQSPALEILGECLKQHAQTTMNQ 297 >UniRef50_C6DHV2 Transcriptional regulator, ArgP, LysR family n=4 Tax=Pectobacterium RepID=C6DHV2_PECCP Length = 299 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 147/290 (50%), Gaps = 2/290 (0%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 +Y L+A ++ F+ AA+KL +TQSA+SQRIKQLE+ GQ L+VR P R T GQ Sbjct: 4 NYPCLRAFMEIVHSGSFDIAARKLHVTQSAISQRIKQLEDQLGQVLIVRGNPCRATPTGQ 63 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQ 124 LL Q+++LE E + T +S+AVNADS+ W L A+ S I L++ Sbjct: 64 ALLRHAEQIDMLESELFSTLEMP-TRQRISVAVNADSIDGWFLDAMENACHQSDILLDIL 122 Query: 125 VEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRS 184 VED+ + LR G V+ AVS + + C V+ LG + Y S+ F + YF +G+ Sbjct: 123 VEDQDHSATLLREGRVMAAVSASPEPIQGCGVEYLGTMRYRAYCSQTFHDTYFADGINAD 182 Query: 185 ALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQ 244 +L AP++ F++ D + F+ ++ P V S+ AFV +G MIP Sbjct: 183 SLQNAPLLIFNNKDRLQSLFI-ESLVPEVIEPPQQFVPSTAAFVGAIFRGLGWGMIPEHM 241 Query: 245 IEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 GEL+ G LYWHR+ S + ++ ++ + L Sbjct: 242 ASSHTEKGELVPFQVGDPVDIRLYWHRWNIRSASLEALSQSVRAAAVRHL 291 >UniRef50_A6Y5L9 Transcriptional regulator n=2 Tax=Vibrio cholerae RepID=A6Y5L9_VIBCH Length = 299 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 102/291 (35%), Positives = 163/291 (56%), Gaps = 4/291 (1%) Query: 8 TLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLL 67 + A AVI E F+RAA++L +T SA+SQRIKQLE+ GQ L+VR P +PT G++LL Sbjct: 7 QVVAFIAVIEEGSFDRAAKRLSVTPSAISQRIKQLEDKMGQLLVVRQFPCKPTPSGEQLL 66 Query: 68 ALLRQVELLEEEWLGDEQTGSTPL----LLSLAVNADSLATWLLPALAPVLADSPIRLNL 123 + ++Q+ LLE E D + S+AVN DSL+TWLL ALAP+ + ++ Sbjct: 67 SRVQQMALLESEVTADLLPDARSNIHSSTFSIAVNEDSLSTWLLKALAPLCRTYNYQFDI 126 Query: 124 QVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTR 183 +V++E T E L+ G V+GA++ + + L C+V +LG + Y+ V++ E+YF +G+ Sbjct: 127 RVDNEDFTLEYLKNGHVIGALTCEARPLQGCVVHELGKMRYVAVATPALFERYFRHGLNV 186 Query: 184 SALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHL 243 A AP++ +DH D + + F++ H + S+ V+ A C+ Sbjct: 187 EAFQNAPMIDYDHKDFLQRRFIRTITGQEVLPRHVHYLPSATGIVEAALLEMGWCVTLEG 246 Query: 244 QIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 + +L +G+LIDL P LYW SR++ +T+AL+ +VL Sbjct: 247 FLGDKLETGQLIDLAPNTALYAPLYWQHVGIRSRVLSTITNALITESKQVL 297 >UniRef50_C7LQL1 Transcriptional regulator, ArgP, LysR family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQL1_DESBD Length = 321 Score = 260 bits (664), Expect = 5e-68, Method: Composition-based stats. Identities = 114/294 (38%), Positives = 166/294 (56%), Gaps = 3/294 (1%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 D + LQAL AVI E+ FE+AA+ L +TQSAVSQRI+QLE GQ L+VR+VP RPT Sbjct: 1 MIDTKHLQALAAVITEQSFEKAARSLFLTQSAVSQRIRQLEEHVGQMLVVRSVPIRPTSA 60 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPL--LLSLAVNADSLATWLLPALAPVLADSPIR 120 G +L RQ+ +LEE + G ++LAVNADSL TW L ++ +LA + Sbjct: 61 GMAMLRHFRQLSVLEESLFEELAPGENSNIATVTLAVNADSLDTWFLRSIPDILAGENVL 120 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L+L V+D++ T LR GEV GA++ L LG ++YL V++ F ++ P G Sbjct: 121 LDLVVDDQSVTHAYLRSGEVQGAITSTPATFQGLLTHDLGDMEYLCVATPAFRMRHCPQG 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 TR A AP+V F+H D + FL+Q F + P H++ S+ +F L QG MI Sbjct: 181 FTRQAADNAPIVIFNHKDALQHEFLRQRFGEEI-TPPAHVMPSNISFQGLILQGGAYGMI 239 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 + E L GEL+DLTPG R ++ ++ +S + R++ + ++ L Sbjct: 240 SRILAEPHLRQGELVDLTPGETLRVPHFYQCWSLQSSLSRRIAEIIVRTARANL 293 >UniRef50_C8WDF3 Transcriptional regulator, ArgP, LysR family n=3 Tax=Zymomonas mobilis RepID=C8WDF3_ZYMMN Length = 302 Score = 256 bits (654), Expect = 7e-67, Method: Composition-based stats. Identities = 102/285 (35%), Positives = 153/285 (53%), Gaps = 2/285 (0%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 DY L A+ AVI+E FE AA+ L IT SA+SQR++ E G L++R P PT+ Sbjct: 1 MLDYTALVAVHAVIQEGSFEAAARFLGITPSAISQRVRGYEERLGALLIIRGQPCMPTDI 60 Query: 63 GQKLLALLRQVELLEEEWLGDEQT-GSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G+ L A + +V+LLE E + + P+ L +AVNADSLATW A+A + + L Sbjct: 61 GRALCAHVEKVQLLEAEIAELSGSKEALPVHLKIAVNADSLATWFPDAVADFIKQEKVFL 120 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 NL VEDET T ++LR GE + A++ Q + C LG + Y+ ++ F + YFP G Sbjct: 121 NLFVEDETVTADKLRSGEAMAAITAQTAPITGCRTIHLGKMVYIACATPSFIKSYFPEGF 180 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 T+ A +AP + F+ D + +LQQN+ + P H + S++ F+ G M P Sbjct: 181 TKQAFTQAPCICFEKHDGLQSQWLQQNYAM-PLPPKIHYIPSTQGFLNFLLAGAGWGMQP 239 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDAL 286 ++ ++ G LI+L P LYW +S + K+T L Sbjct: 240 FPLVKVDIEEGRLIELQPKRAVEVDLYWVVPRLKSDLFEKLTHYL 284 >UniRef50_Q02H78 Chromosome initiation inhibitor n=28 Tax=Gammaproteobacteria RepID=ICIA_PSEAB Length = 300 Score = 256 bits (654), Expect = 7e-67, Method: Composition-based stats. Identities = 117/299 (39%), Positives = 165/299 (55%), Gaps = 5/299 (1%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 M DY+ L AL AV+ + GFERAAQ L ++QSAVSQRIK LE GQP+LVR PP PT Sbjct: 1 MILFDYKLLAALAAVVEQGGFERAAQALGLSQSAVSQRIKLLEARVGQPVLVRETPPHPT 60 Query: 61 EQGQKLLALLRQVELLE---EEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 + G++LL ++QV LLE + W+ + G P L +A+NADSLATW A+ A+ Sbjct: 61 DLGRRLLNHVQQVRLLEGDLQRWVPNLDEGGAPERLRIALNADSLATWWAAAVGDFCAER 120 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 + L+L VED+ +R+R GEV G V + + LGA+ Y ++S F ++F Sbjct: 121 RVLLDLVVEDQEVGLKRMRAGEVAGCVCGSARPVAGARSLLLGAMRYRGLASPDFIARHF 180 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 P GV +AL P + F D + FL+ G H+ SSE FV+L G Sbjct: 181 PRGVEAAALAGVPAIVFGPDDLLQHRFLKDLGV--EGGFIHHLCPSSEGFVRLTAGGLGW 238 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 ++P Q++ ELA GEL++L PG LYWH + ++ +T+ LL L + Sbjct: 239 GLVPERQVQGELARGELVELLPGQVIDVPLYWHYWRNGGELLASLTEHLLARAGDGLVR 297 >UniRef50_B9B8W0 Transcriptional regulator, LysR family n=3 Tax=Burkholderia RepID=B9B8W0_9BURK Length = 318 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 98/295 (33%), Positives = 149/295 (50%), Gaps = 2/295 (0%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 D + L+ +V++ + F RAA L I+ AVSQRIK LE G LL+R PT+ Sbjct: 10 LLDRQQLETFASVVQHKHFRRAAAALNISPGAVSQRIKALEESVGAMLLMREPTIVPTQA 69 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGS-TPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G +L + V LLE + L + P+ ++AVNADSLATW P +A LA + L Sbjct: 70 GDAILRYIMAVRLLEYDALQRIKPDRFPPMDFAIAVNADSLATWFEP-VAWQLARQHVSL 128 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 + V+D+ T L RG+V G +S Q Q LP + + +G + Y V+ FA ++F NG Sbjct: 129 EIIVDDQDHTLTSLARGDVKGCISTQRQPLPGFVAEFVGGMRYRCVAPPEFAGRHFANGF 188 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 + LK + F+ D +H +FL+ F + G H S A + G ++P Sbjct: 189 MLADALKVTAILFNRKDALHDSFLKSFFGVAVGKYVKHYFPSPGALLNGILNGLGYGLVP 248 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 +Q + +ASG+L+DL P LYWH + E K++ ++ + L Q Sbjct: 249 AMQADPLIASGQLVDLAPEQSLVVDLYWHHWESEPPPAAKISQLVMAHARHCLVQ 303 >UniRef50_B9JYX8 Transcriptional regulator LysR family n=9 Tax=Alphaproteobacteria RepID=B9JYX8_AGRVS Length = 301 Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 108/291 (37%), Positives = 155/291 (53%), Gaps = 5/291 (1%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 D L AL AV+R FE+AA++L +TQSA+SQRIK LE G L++R P PT G Sbjct: 4 DGEQLSALVAVLRSGSFEKAARQLGVTQSAISQRIKLLEERSGTALIIRGQPCLPTSAGA 63 Query: 65 KLLALLRQVELLEEEWLGDEQTGS-TPLLLSLAVNADSLATWLLPALAPVLADSPIRLNL 123 +L +V LLE E +GD + + LA+NADSLATW +PA+A V + +L Sbjct: 64 RLCRHAEEVALLEREVIGDLGLAQAAQVTVRLAINADSLATWFVPAMAAV---EGLLFDL 120 Query: 124 QVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTR 183 ++D+ + + LRRGEV AV+ + C LG L Y +S F ++FP GVT Sbjct: 121 VLDDQDHSADWLRRGEVRAAVTSLAAPVQGCDCRPLGLLTYRATASPDFVARWFPQGVTA 180 Query: 184 SALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHL 243 AL AP + F+ D + A+++Q S PCH + SS+AF+ +R G M P + Sbjct: 181 EALAVAPCLTFNAKDGLQTAWIEQVAGCR-LSPPCHWLPSSQAFIDASRLGLGWGMNPAV 239 Query: 244 QIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 + +A G L+DL P LYWH R + +T ++L + L Sbjct: 240 SVAPLIAEGVLVDLRPDQPLAVPLYWHWSRALGRALDPLTASVLAAARQCL 290 >UniRef50_B4S2Z4 Chromosome replication initiation inhibitor protein n=3 Tax=Gammaproteobacteria RepID=B4S2Z4_ALTMD Length = 294 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 93/293 (31%), Positives = 152/293 (51%), Gaps = 1/293 (0%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 DY L+ V+R GFE+ AQ L +TQSAVSQ+IK+LE G P++VRT P + T Sbjct: 1 MLDYDALRCFHEVLRYGGFEKGAQALNLTQSAVSQKIKRLEQSVGGPVMVRTKPLKATPL 60 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 G++LLA +++V +LEE ++ +S+AVN D LATW +A ++ Sbjct: 61 GKELLAHIQKVSVLEEALNIKSGLEASAAPISIAVNNDVLATWYSQVMASFSEKHANPVH 120 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 + D+T+T+E L++G V+ +S + +LG + Y +S F E++ NG++ Sbjct: 121 IVNADQTQTREILQQGRVMACISQTGTPVTGGQSVRLGTMRYQLYASPRFIERHLSNGIS 180 Query: 183 RSALLKAPVVAFDHLD-DMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 ++ P + +D D + + ++ ++ P CH SS FV++A G ++P Sbjct: 181 PEHVMNTPGLLYDEYDVTLLTDYQRECLNIAPTFTTCHWYPSSHGFVKMALDGVVWALLP 240 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 LQ+ +E+ GELI L P L+WH ES + +T A+ L Sbjct: 241 TLQVAQEVKEGELIPLFPQKELGVPLFWHWTTLESAALADLTTAVKKVAKAQL 293 >UniRef50_Q2T9B3 Transcriptional regulator, LysR family n=54 Tax=Burkholderia RepID=Q2T9B3_BURTA Length = 297 Score = 254 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 103/298 (34%), Positives = 149/298 (50%), Gaps = 8/298 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 DY L AL VIR FERAA+ L ++ SAVSQR+K LE G L+ R +P T Sbjct: 1 MLDYALLDALAEVIRHGSFERAAKALNVSPSAVSQRVKLLEERVGSVLVKRGLPCVATTS 60 Query: 63 GQKLLALLRQVELLEEEWLGD------EQTGSTPLLLSLAVNADSLATWLLPALAPVLAD 116 G L +V +LE E G QTG+ P L +AVN DS+ATW + A+ A+ Sbjct: 61 GALLCRHTERVRMLEAELSGHMPAFAGAQTGAWP-TLRVAVNDDSVATWFVDAVGSFCAE 119 Query: 117 SPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY 176 S L+L ++D+ T ER+R G V GAV+ + + C +LG + Y V S F +Y Sbjct: 120 SGTLLDLVIDDQDYTAERIRDGSVQGAVTALAEPIQGCRSTRLGRMRYHAVCSPAFHARY 179 Query: 177 FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 F NGV R AL +AP V F+ D + F+++ + P H + +++ G Sbjct: 180 FGNGVNRDALRRAPCVMFNPKDSLQARFIRRVTRVD-LDPPKHWIPHVAGYLRACEAGLG 238 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 M P +E+ +A+GEL+DL+ G LYW + + + AL + L Sbjct: 239 WGMCPERMVERRIAAGELVDLSDGRSIDVELYWQSWRLSIGWLDEFGAALKASAAQYL 296 >UniRef50_A1TMH4 Transcriptional regulator, LysR family n=9 Tax=cellular organisms RepID=A1TMH4_ACIAC Length = 318 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 101/303 (33%), Positives = 156/303 (51%), Gaps = 8/303 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 DY L+AL AV+RE FERAA++L +T SAVSQR+KQLE GQ L+ R P TE Sbjct: 1 MLDYAGLEALAAVVREGSFERAARRLHVTPSAVSQRVKQLEERAGQVLVQRGTPCTGTEA 60 Query: 63 GQKLLALLRQVELLEEEWLG-----DEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 G++L L QV LLE E + + LAVN DSL+TW + A+A Sbjct: 61 GRRLCLHLEQVALLENELRRVHPALVPDAHAPAPTVKLAVNDDSLSTWFMDAMAAFAEGG 120 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 L+++++D+ T +RLR GEV+ AV+ A+ C LG++ Y+ +S F ++F Sbjct: 121 NELLDVRIDDQEHTAQRLREGEVIAAVTATAGAIAGCNTWPLGSMHYVAAASPAFVRRHF 180 Query: 178 ---PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQG 234 GVT+ + +AP++ + D + +LQ+ P H + S++ F++ G Sbjct: 181 GPDTGGVTQDTIAQAPMMVYSRNDRLQDQWLQRQGLGSRRHPPRHFLPSNQGFLRSCEMG 240 Query: 235 TTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 M P + IE++LA G L+++ PG LYW + ++T ++ L Sbjct: 241 IGWGMHPTVLIERQLADGTLVEMLPGTGMDVALYWAHPRSAQAGLERLTQCVMAAAQAWL 300 Query: 295 RQD 297 D Sbjct: 301 GAD 303 >UniRef50_D1U749 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U749_9DELT Length = 309 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 111/295 (37%), Positives = 163/295 (55%), Gaps = 1/295 (0%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 DY+ ++AL V+ E GFE+A + L +TQSAVSQRI+ LE + G LLVR PPRPT+ Sbjct: 1 MLDYKLVEALAVVVAEGGFEKAGRVLGLTQSAVSQRIRLLEELAGCVLLVRASPPRPTDA 60 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTP-LLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G+ +L L RQV LEE S+ L++ +NADSLATW P + L P+ L Sbjct: 61 GRGMLTLYRQVHHLEEGLSARLGLESSGFATLAVGINADSLATWFFPVVDGFLDSEPVLL 120 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +L+V+D+ +T LR GEV+G +S + + + C V LG + Y + + ++F +GV Sbjct: 121 DLRVDDQAQTHALLRNGEVLGCISDRAEPMQGCSVHVLGEMHYRLYGTPAYQSRWFASGV 180 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 TR + +AP++ F+ D MH A L Q P + SSE F G C M+P Sbjct: 181 TREGVERAPMLIFNRKDVMHAALLAQALGSEPSGYTPFYLPSSEQFAPAIGSGRVCGMLP 240 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 Q + GEL+DL PG L+WH + E+ ++ + T AL+ +VL + Sbjct: 241 DEQAHGPVGRGELVDLLPGHAFTVSLHWHCWNLETSVLTRFTRALVAGARRVLAE 295 >UniRef50_B9JHJ0 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JHJ0_AGRRK Length = 291 Score = 252 bits (644), Expect = 9e-66, Method: Composition-based stats. Identities = 97/294 (32%), Positives = 148/294 (50%), Gaps = 6/294 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 DY+ L+AL V+R+ FERAA+ L IT SA+SQRIK LE G L+VR P PT Sbjct: 1 MMDYQQLEALVEVLRQGSFERAARTLNITPSAISQRIKTLEERVGAVLIVRGQPCLPTSV 60 Query: 63 GQKLLALLRQVELLEEEWLGDEQTG--STPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G +LL +V LLE+E + + S + + +AVNADSL TW A+ + Sbjct: 61 GTRLLHHAERVHLLEQEVRNEIEGATVSEKITVRIAVNADSLVTWFCEAMKAF---DDVY 117 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 +++ ED+ T E L G+V AVS + C KLG + Y V++ F EK FP+G Sbjct: 118 IHVLREDQEHTFELLWSGDVAAAVSSTDVEVAGCDRRKLGHMRYRAVATPQFIEKNFPDG 177 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 VT +AL +A + FD DD++ + + F +P H + S+ +Q G + Sbjct: 178 VTPAALSQAVGLRFDTKDDLNDQWTENYFG-KSCPIPTHWLPSTHGILQGTLAGLGWGIN 236 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 P + + + L++G L +L LYW+ ++ +T ++ L Sbjct: 237 PEILVREHLSTGILQELISDAPVDVPLYWYHSRVAQPLLSSLTASVEKICRAFL 290 >UniRef50_A1VG08 Transcriptional regulator, LysR family n=3 Tax=Desulfovibrio vulgaris RepID=A1VG08_DESVV Length = 302 Score = 252 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 106/296 (35%), Positives = 163/296 (55%), Gaps = 3/296 (1%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 M DYR ++A+ AV+ E FE+AA +L ITQSAVSQR+K LE+ G+ L+VR P R T Sbjct: 1 MSMYDYRQVEAVAAVVLEGSFEKAAARLHITQSAVSQRVKALEDSLGRMLVVRASPVRAT 60 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPL--LLSLAVNADSLATWLLPALAPVLADSP 118 ++GQ+++ +V LE + T L +A+NADSLATW L A+ P+L Sbjct: 61 DEGQRIVEHYLKVGQLEADLGASLVTDRPAAWTTLPVAINADSLATWFLDAVGPLLRRER 120 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 + L++ ED+ T LR G V ++ + + LG + L +++ FA ++F Sbjct: 121 VLLDIVTEDQEHTYRLLREGRVAACITTRADPVQGWRSLALGDMPSLCLATPEFAARWFS 180 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 G+T +A+ +AP V ++ D +H FL F+ P H V SSE FV + G Sbjct: 181 EGLTPAAVREAPAVLYNRKDSLHHRFLSDLFE-EEVDFPAHYVPSSERFVDVLAGGFAYG 239 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 ++P LQ E+ LA G L DL PG LYWH ++ +R + ++T+ ++ + VL Sbjct: 240 IVPALQAERHLADGVLCDLAPGRAVSVHLYWHCWSLTTRFVEELTENVVSHARAVL 295 >UniRef50_A1R3I4 Putative transcriptional regulator, LysR family n=2 Tax=Micrococcineae RepID=A1R3I4_ARTAT Length = 313 Score = 252 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 105/306 (34%), Positives = 152/306 (49%), Gaps = 10/306 (3%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 M L V+ E + AA+ L IT SAVSQR+K LE G+ LL R+ P + T Sbjct: 1 MSHFPSEQLLTFATVLSEGTLDAAARLLHITPSAVSQRLKALEQSAGRVLLQRSNPAQAT 60 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQ--TGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 E G+ +L L RQV LE + + + L + + VNADSLA W L ALA V D Sbjct: 61 EAGEVVLRLARQVAQLEADAGRELGLSADAAQLAVPIVVNADSLAVWFLKALAQVPGDLN 120 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 + +L +DE + LR G V+ AV+ + + C V+ LG + Y V++ F E++FP Sbjct: 121 VTFDLHRDDEQHSTSLLRSGTVMAAVTATPEPVQGCRVESLGVMRYRAVAAPHFVERWFP 180 Query: 179 ---NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFD-----LPPGSVPCHIVNSSEAFVQL 230 G + L A V FD D AF+Q F +P P H V +S+ F Sbjct: 181 GLDKGFDGATLNAATTVDFDRKDTYQWAFVQWAFTAEGRPVPGRKGPRHYVPASQDFGDA 240 Query: 231 ARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG 290 R G +IP +Q ++A G LI+L PG LYW R+ SR++ +++ + D Sbjct: 241 IRLGLGWGLIPEVQCGPDIADGRLIELAPGRPFDVQLYWQRWRTASRVLDVLSETVRDVS 300 Query: 291 HKVLRQ 296 + LR+ Sbjct: 301 ARYLRR 306 >UniRef50_A3Y969 Chromosome replication initiation inhibitor protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y969_9GAMM Length = 292 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 94/290 (32%), Positives = 157/290 (54%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 DY+ ++ L V+ +GFE+A L +TQSAVSQ+IK+LE + LL+R P R T G+ Sbjct: 2 DYKAIECLRQVVESQGFEKAGDVLGLTQSAVSQKIKRLEQSYNSVLLIRDKPLRLTALGK 61 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQ 124 KL +V+L+E+ + + + L +A+N DSLATW + ++ D RL + Sbjct: 62 KLNMHYIKVQLMEQALVSESSGDQSLQCLPIAINNDSLATWFIHVISKFSKDENRRLQCK 121 Query: 125 VEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRS 184 + D++ T++ L++GEVV A+S ++ LG++DY+ V+S F Y T Sbjct: 122 IADQSLTRDLLKKGEVVAALSDTGASIAGGESLYLGSMDYILVASPKFIANYLGRRFTAL 181 Query: 185 ALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQ 244 + K P + FD D + ++ Q L + CH + SS+ FVQ+ C ++P +Q Sbjct: 182 DIAKVPALIFDENDQLWSSYQTQILGLEGNARACHWLPSSQGFVQMLLSDNVCGLVPKIQ 241 Query: 245 IEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 IE+EL G L++L P + L+WH +S ++ ++TD ++ L Sbjct: 242 IEQELKEGRLVELMPKKRLKVPLFWHWCGLDSALISELTDTVVRQAKLNL 291 >UniRef50_C7RVK7 Transcriptional regulator, LysR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RVK7_9PROT Length = 302 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 101/297 (34%), Positives = 157/297 (52%), Gaps = 5/297 (1%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 R D L A AV+ E FE AA+KL +T SAVSQRIK LE+ GQ L+ R+ P R T Sbjct: 2 RIDNAQLAAFAAVLGEGSFELAARKLSVTPSAVSQRIKLLEDRLGQVLIQRSTPCRATAA 61 Query: 63 GQKLLALLRQVELLEEEWLGD----EQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 G++LL QV LLE E L + E +G T + + + VNADSL +W + + Sbjct: 62 GRRLLRHAEQVALLESEVLSELGVVEGSGQTNVRIPIVVNADSLDSWFAEVFDALPGVTS 121 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 I L+++ ED+ + LR G V+ VS +A+ C V+ LGA+ YL V+S + ++YF Sbjct: 122 ITLDIRSEDQDHSVALLREGTVMAGVSASAEAIQGCRVEALGAMRYLAVASPAYVDRYFA 181 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 GV+ L APV+ F+ D + + F+ + P H S+ +F++ AR+G Sbjct: 182 AGVSADTLNAAPVLMFNKKDALQRLFVARLTG-TVLQAPTHCAPSTRSFLEAARRGAAWG 240 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 M+P + L +G+L+++ P + LYWH + S + ++ + + L Sbjct: 241 MMPEQIVAAALRNGDLLEMVPDHWLDIPLYWHCWRIGSSALDVLSKLVCQAAGRSLH 297 >UniRef50_Q30VM9 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30VM9_DESDG Length = 316 Score = 251 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 119/316 (37%), Positives = 172/316 (54%), Gaps = 23/316 (7%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 +YR ++AL V+RE GFE+AA+ L +TQSAVSQRI+QLE G L+ R P PTE Sbjct: 1 MLEYRLIEALAMVVREGGFEKAARVLHVTQSAVSQRIRQLEAAAGTALVTRAAPVTPTEA 60 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTP----------------LLLSLAVNADSLATWL 106 G++LL QV +LE + D + LS+AVNADSLATW Sbjct: 61 GRRLLRHYHQVSMLEADLERDMAARFSAELLGEGGAAHGRAPAYRQLSVAVNADSLATWF 120 Query: 107 LPALAPVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLF 166 L A+ V + L++ V+D+ RT + LR GEVVG VS + C + +LG+++YL Sbjct: 121 LEAVDAVAEQEKLLLDVLVDDQDRTHDLLRNGEVVGCVSTRATPFHGCSMQRLGSMEYLV 180 Query: 167 VSSKPFAEKYF------PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGS-VPCH 219 ++ FA ++ T + LL+AP V ++ +D +H LQ + + P + P H Sbjct: 181 CAAPDFAAEHGLRVGADGRAATAADLLRAPAVLYNRVDGVHDTMLQTLYGIAPDTPYPRH 240 Query: 220 IVNSSEAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMM 279 V SSEAFV++ G +PHLQ E LA GEL+DL PG L+WH + + + Sbjct: 241 YVPSSEAFVKMVAAGFGWGCVPHLQAEPLLAGGELVDLAPGWALPVALHWHWWDLGTGLF 300 Query: 280 RKVTDALLDYGHKVLR 295 +++ L D+ VLR Sbjct: 301 KRMAAVLSDHAALVLR 316 >UniRef50_Q6FDJ8 Inhibitor of replication initiation (Transcriptional regulator of dnaA and argK (Affects arginine transport) (LysR family)) n=12 Tax=Acinetobacter RepID=Q6FDJ8_ACIAD Length = 297 Score = 249 bits (636), Expect = 8e-65, Method: Composition-based stats. Identities = 100/294 (34%), Positives = 160/294 (54%), Gaps = 2/294 (0%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 D + A AV + FE+AA +LCIT SAV+ R++ LE GQ LL+R P T Sbjct: 1 MLDNKQCDAFFAVAEQGSFEQAAIQLCITASAVTLRVQALEKELGQLLLIRARPCTLTHA 60 Query: 63 GQKLLALLRQVELLEEEWLGD--EQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 GQ+L L+ LE+ +L + + T S + +A NADSLATWLLPAL V + + Sbjct: 61 GQQLFEHLQHTRRLEQNFLHNLTDATPSQFFKVMMAANADSLATWLLPALNEVASQQKLM 120 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L + ++D++ T + +G V +SI+ +A+ C LG++ Y ++++ F +F +G Sbjct: 121 LEILLDDQSHTHALMEKGTVSACISIEPKAMKGCKSVYLGSMRYKMLATQAFQGTWFRHG 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 V R AL AP + F+H D MH L++ + L G+ P H + SS F + G ++ Sbjct: 181 VHREALRVAPAIIFNHKDQMHFDLLEKQYGLIKGAYPYHYIPSSACFFTAVQLGLGYGLV 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 P LQ+++ +L D+ P + LYWH + +SR ++ +T+ L + K L Sbjct: 241 PELQLKQAADPDQLRDIMPEMQLDIPLYWHHWQQQSRPLQSLTEHLTQHAAKYL 294 >UniRef50_Q2RWN3 Transcriptional regulator, LysR family n=20 Tax=Alphaproteobacteria RepID=Q2RWN3_RHORT Length = 310 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 96/301 (31%), Positives = 154/301 (51%), Gaps = 8/301 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 DY A+ V++ FE+AA+ L +T SA+SQR+K +E+ G L+ R P TE+ Sbjct: 1 MIDYPAALAVALVVQTGSFEKAAKALHVTPSAISQRVKMIEDRLGVSLIERGTPCIATEK 60 Query: 63 GQKLLALLRQVELLEEEWL----GDEQTGSTPL---LLSLAVNADSLATWLLPALAPVLA 115 G+ L + V +LE++ + G + G+ PL L+LA NADSL TW L A+AP Sbjct: 61 GEWLCRHMDHVGMLEKDLIKHMPGLAEAGADPLHRVTLTLATNADSLGTWFLGAVAPFAR 120 Query: 116 DSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEK 175 + +++ V+DE T + L RG V+ AV+ + + C V +LGAL Y +S F E+ Sbjct: 121 STDFLVSIAVDDEDYTADWLHRGRVLAAVTSLAKPVKGCRVTRLGALRYQATASPEFFER 180 Query: 176 YFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGT 235 YF GVT L +AP + F D + + ++++ S P H + S++ FV G Sbjct: 181 YFARGVTPETLARAPALTFSQKDRLQRDWIRRTLG-QSVSFPTHWLPSTQGFVDACLAGM 239 Query: 236 TCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 M P + L +G L+++ PG L+W + + +T A++ + L Sbjct: 240 GWGMNPAQMVGAHLQAGRLVEILPGRTLDSPLFWQVNRLAADQLADLTRAVVGQASRALI 299 Query: 296 Q 296 Q Sbjct: 300 Q 300 >UniRef50_B4SNX8 Transcriptional regulator, LysR family n=12 Tax=Proteobacteria RepID=B4SNX8_STRM5 Length = 301 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 103/298 (34%), Positives = 157/298 (52%), Gaps = 4/298 (1%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 R D+ L+AL AVIRE F+RAAQ L +T SA+SQR+K LE+ G+ L+ R P T + Sbjct: 2 RIDHAQLRALAAVIREGSFDRAAQSLNVTPSAISQRVKALEDRVGRLLVKRGTPATATAE 61 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGST---PLLLSLAVNADSLATWLLPALAPVLADSPI 119 GQ L+ L Q LLE + L + +AVN DSL TW A + Sbjct: 62 GQVLVQLAEQTALLEHDALHRMGLADEDLPQASIPVAVNHDSLETWFPQAAFQFAQSTGT 121 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 L+L+VED+ T E LR+G V+GAV+ + + C + LG++ Y + F E++F Sbjct: 122 TLDLRVEDQDHTVELLRQGTVLGAVTTLDEPVQGCQIHALGSIRYAATCTPEFRERHFAK 181 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQ-NFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 GVT AL APV+ F+ D+M F ++ D P + P + S+ AFVQ G Sbjct: 182 GVTAQALATAPVLVFNRKDEMQSRFARRMAGDDLPSTAPTWWIPSTRAFVQANLGGMGWT 241 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 M P +++ L +G L+ + ++ LYW + + + M +T A+L+ ++R+ Sbjct: 242 MNPLPLVKRHLDAGRLVYVRQRAWEDVPLYWQHWKGDVQTMALLTRAVLEASSALVRR 299 >UniRef50_D0L7H5 Transcriptional regulator, ArgP family n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0L7H5_GORB4 Length = 302 Score = 247 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 100/297 (33%), Positives = 155/297 (52%), Gaps = 8/297 (2%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQG 63 L+ L AV+ FE AA +L +T SAVSQRIK +E G+ L+ RT P PT G Sbjct: 3 ISLDGLRTLRAVLEYGTFEAAAAELHVTPSAVSQRIKAMEVSVGRVLVHRTKPATPTSDG 62 Query: 64 QKLLALLRQVELLEEEW----LGDEQTGSTPL--LLSLAVNADSLATWLLPALAPVLADS 117 + L+ L Q ELL E +GD+ TGS P L +A N+DSLATWLLPALA + + Sbjct: 63 EVLVRLAEQWELLSAEARLELVGDDGTGSPPRLIHLPIAGNSDSLATWLLPALARIHREH 122 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 P+ + + +DE+R + LR GEV+GA++ A+ C V LG++ YL V++ F + + Sbjct: 123 PVVVEVLRDDESRNSDFLRSGEVLGAITSDPVAIRGCTVVPLGSMRYLPVATPHFLDTWM 182 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 P+G +L +AP+V++D D + + L + F P + +S + + G Sbjct: 183 PDGADEDSLSRAPMVSYDRNDHIQREALGR-FSSHISEPPTVYIPASGEYHRAVELGMGW 241 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 ++P QI L +G ++ L+W + S ++ VT ++D L Sbjct: 242 GLVPTAQITDALTTGRVVRFLDAD-VDVPLFWQYWKLSSPLLDAVTQIIVDAARTEL 297 >UniRef50_B8DQE7 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DQE7_DESVM Length = 320 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 126/320 (39%), Positives = 176/320 (55%), Gaps = 25/320 (7%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 DYR ++A+ VIRE GFERAA+ L +TQSAVSQR+K LE+ G L+VR P R T++ Sbjct: 1 MLDYRLVEAVATVIREGGFERAARVLHLTQSAVSQRVKALEDQLGTVLVVRATPVRATDE 60 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPL-------------------LLSLAVNADSLA 103 G++LLA +V LLE + + L +AVNADSLA Sbjct: 61 GRRLLAHCDKVGLLETDLAAALRPEGGAGGASGSPDSDGPEIPRIPWTTLPVAVNADSLA 120 Query: 104 TWLLPALAPVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALD 163 TW A+AP L L+L V+D+ RT LR G V AVS + A+ C LG +D Sbjct: 121 TWFPDAVAPFLRAERALLDLSVDDQERTHLLLRDGHVAAAVSTRAAAVQGCRCLPLGRVD 180 Query: 164 YLFVSSKPFAEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQ------NFDLPPGSVP 217 YL +++ FA ++FP G+T +AL +AP V F+ D++H FL+ +FD S+P Sbjct: 181 YLCLAAPHFAAQWFPAGLTEAALCRAPAVIFNRADEVHHQFLRGLPPGATSFDRIARSLP 240 Query: 218 CHIVNSSEAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESR 277 H + SSE FV + QG MIP Q + LA G LIDL PG LYWH + +R Sbjct: 241 LHYIPSSERFVDVVAQGLAYGMIPLPQARQHLADGRLIDLAPGHAVPIRLYWHCWGLRTR 300 Query: 278 MMRKVTDALLDYGHKVLRQD 297 ++ +T ++ + +VL Q+ Sbjct: 301 LLDALTHHVVSHAQQVLAQE 320 >UniRef50_A3MG84 Chromosome initiation inhibitor n=54 Tax=Proteobacteria RepID=A3MG84_BURM7 Length = 325 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 102/293 (34%), Positives = 158/293 (53%), Gaps = 2/293 (0%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQG 63 D + AL AV FE+AA +L +T SAV+QR++ LE G PLL+RT P RPT G Sbjct: 3 IDPKQAAALVAVADTGSFEQAAARLHVTASAVTQRVRALEASLGAPLLLRTRPCRPTADG 62 Query: 64 QKLLALLRQVELLEEEWLGDEQTGST-PLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 Q++L LR++ LL+ + + + + +++A+N+DSL +W LPAL VLA + Sbjct: 63 QRVLQHLRRMALLQVDLQAELEAERGSTIAVAIALNSDSLGSWFLPALTSVLAGERMLFE 122 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 L VED+ T L G +G V+ Q + + C LG + Y ++++ FA ++F G+T Sbjct: 123 LIVEDQDHTFALLESGMAIGCVTTQSKPMRGCFATPLGTMRYRLIAAEEFAARWFAQGLT 182 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 R + +APVVA D + +FL+ LP G+ PCH V + A R G M+P Sbjct: 183 RESAREAPVVAHGRRDTLQSSFLRDKLGLPDGAFPCHYVPGTHAHFAAVRHGLGYAMVPE 242 Query: 243 LQIE-KELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 L + LA L+DL P LYWH + +S M ++ +++ ++L Sbjct: 243 LLLGTTPLAEQRLVDLAPAHSTDVSLYWHAWTVQSPKMESLSSRVVEAAQQLL 295 >UniRef50_Q93JR1 AttR protein n=1 Tax=Rhodococcus fascians RepID=Q93JR1_RHOFA Length = 320 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 106/296 (35%), Positives = 149/296 (50%), Gaps = 11/296 (3%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 ++ L L A+ FE AA L I+ SAVSQRI LE G LL RT P PT GQ Sbjct: 3 NHDQLATLAAICDSGSFEGAATALHISSSAVSQRITALERASGAALLQRTRPVLPTRNGQ 62 Query: 65 KLLALLRQVELLEEEWLGDEQTGST------PLLLSLAVNADSLATWLLPALAPVLADSP 118 LL L RQ+E+L + + + GST PL SLA+NADS++TW P + + D Sbjct: 63 ALLRLARQIEVLTVDADAELRGGSTTTNTAAPLRFSLAINADSVSTWFQPVMKAIAVDRR 122 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 I L+L +ED+ T LR+G V+ AV+ A P C V+ LGA+ Y + Sbjct: 123 ILLDLHIEDQDHTDALLRQGAVMAAVTTSRTAAPGCTVEPLGAMVYWPACAPSLIRDADS 182 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 +G S L P++ FD DD+ A+L++ P H + S+ F+ AR G Sbjct: 183 DGCDPSRL---PMLRFDKKDDLQHAYLRKIKAHRE--PPIHYLPSNREFLTAARLGLGWG 237 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 ++P QI ++LA G L+ L P LYW R+ S + ++T + D H L Sbjct: 238 VLPEGQIARDLADGTLVHLDPDHNVTIPLYWQRWHLPSETLDRITGWVRDAAHNAL 293 >UniRef50_C1SIA9 Transcriptional regulator, ArgP family n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SIA9_9BACT Length = 293 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 92/286 (32%), Positives = 145/286 (50%), Gaps = 2/286 (0%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 DY+ L+A AV+ +GFERA+ L +TQSAVSQR++QLE GQ LLVR+ PP PT+ G+ Sbjct: 3 DYKLLEAFTAVVENKGFERASLVLHLTQSAVSQRVRQLEEAVGQILLVRSNPPVPTDAGK 62 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPL--LLSLAVNADSLATWLLPALAPVLADSPIRLN 122 +++ ++VELLE E +S+++NADSL TW L A+ + + I L Sbjct: 63 NIISHFKKVELLEVELDNSLLHKEVSGFTTVSVSLNADSLCTWFLDAVEKAVKKNRILLK 122 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 L V+D+ T ++ GEV +S + + SC +G + Y S EK+F NG Sbjct: 123 LYVDDQDETHRMMKDGEVSACISTRDKPFQSCSCSLIGTMSYKMFCSPEIYEKHFKNGFD 182 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 + L + PV+ ++ D +H+ F P P + + M+ Sbjct: 183 INTLKEVPVIIYNEKDTLHKQMFTNAFKTQPSDFPYMHIPDVNKYKDAIANSFGIGMMTV 242 Query: 243 LQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLD 288 +Q + L +G L D + LYWHR+ S + +T+++L Sbjct: 243 MQCREFLDNGTLRDAFYPHTVQTPLYWHRWNITSLSLDALTNSILK 288 >UniRef50_Q4UXK0 Transcriptional regulator lysR family n=8 Tax=Xanthomonadaceae RepID=Q4UXK0_XANC8 Length = 305 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 102/292 (34%), Positives = 157/292 (53%), Gaps = 5/292 (1%) Query: 8 TLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLL 67 L A AV+ E FE AA++L +T SA+SQRIK LE+ GQ L++RT P R T GQ+LL Sbjct: 7 QLAAFAAVLDEGSFELAARRLSVTSSAISQRIKALEDRLGQVLVLRTAPCRATPAGQRLL 66 Query: 68 ALLRQVELLEEEWLGD----EQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNL 123 LR +++L+ E + D G TP LS+AVN DSL TW+L ALA + + ++ Sbjct: 67 RRLRPMQVLQAEAMADFLPDAGVGGTPRTLSIAVNDDSLQTWVLSALAELHQAHGLLFDV 126 Query: 124 QVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTR 183 V+D+ T E LR G V+GAV+ + + L C V LG + Y ++S +YF +G+ Sbjct: 127 HVDDQDHTLELLRAGTVLGAVTAERRPLQGCNVQPLGTMRYHAIASPDVVARYFSSGLDA 186 Query: 184 SALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHL 243 + L +AP++ F+ D + F ++ + S P H + +S FV A +G C+ P Sbjct: 187 AGLSRAPMMVFNRKDALQARFARRITRMQ-LSPPIHYLPTSTGFVDAAARGLGWCLAPEA 245 Query: 244 QIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 + + L+ + P + LYW A S ++++ D+L LR Sbjct: 246 MVLPAVERKTLLIIDPTRWLDVPLYWQHAAVRSTTLQRLGDSLRTAAAASLR 297 >UniRef50_D2NQ78 Transcriptional regulator n=2 Tax=Rothia mucilaginosa RepID=D2NQ78_9MICC Length = 305 Score = 243 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 96/304 (31%), Positives = 149/304 (49%), Gaps = 11/304 (3%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 M R L VI F+ AA L ++ SA+SQRIK +E + G+ L+ R+ P PT Sbjct: 1 MTRFSTDQLTTFATVIEYGTFDAAADILRVSPSAISQRIKAMEQIAGKVLVRRSNPVTPT 60 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 + GQ +L + RQ E L++E + +S+AVNADSLATW L A+ + + I Sbjct: 61 DAGQSVLRIARQSEFLQQEMERELMGAGGFQSVSVAVNADSLATWFLDAVGILSREDSIF 120 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 +L+ E E + LR GEV+ ++ + + +P C V+ LG Y V++ F ++Y P Sbjct: 121 CDLRREGEFHSSAMLRSGEVMAVITSKPEKIPGCSVETLGVARYWCVATPDFVQRYLPGW 180 Query: 181 ---VTRSALLKAPVVAFDHLD---DMHQAFLQQNFDLPPGSV----PCHIVNSSEAFVQL 230 ++R L +APVV +D D D+ +A +++ L P + SS + + Sbjct: 181 PKIMSREELNRAPVVEYDRKDFVQDVARALIEKEVGLEAEETFTQSPTIYIPSSPDYARA 240 Query: 231 ARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG 290 G +IP Q +EL SG L+ L LYW R+ S +M VT + + Sbjct: 241 VSSGIAWGLIPEAQCAEELESGHLVKLA-ATPVEFPLYWQRWNINSPVMETVTRRVHEAA 299 Query: 291 HKVL 294 L Sbjct: 300 RGDL 303 >UniRef50_Q13XH7 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=Q13XH7_BURXL Length = 317 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 97/293 (33%), Positives = 154/293 (52%), Gaps = 3/293 (1%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 D + L+A A++ R F RAA+ L IT+ AVS R+K LE FG PL+VR PT G+ Sbjct: 4 DRQQLEAFSAIVETRHFGRAAKLLSITRGAVSLRLKALEEEFGTPLVVRDGNV-PTPAGE 62 Query: 65 KLLALLRQVELLEEEWLGDEQ-TGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNL 123 LL +R +++LE E + T +++AVNADSLATW A+A +A+ + L L Sbjct: 63 VLLRHIRVLKMLEAETQQQIKPTDGMHPRVAIAVNADSLATWF-EAVAWEIAERNVALEL 121 Query: 124 QVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTR 183 V+D+ T L +GE +G VS L + +G ++Y V++ FA K+FP G+ Sbjct: 122 IVDDQDYTLPLLTKGEAMGCVSTSSNPPTGFLAEPIGMMEYECVANVEFAAKFFPQGLGL 181 Query: 184 SALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHL 243 +L AP V ++ D +H FL++ DL + H S A + +G ++P L Sbjct: 182 HGVLAAPAVLYNRKDGLHTLFLERLLDLEVRNYATHYFPSPSALLAAIEKGIGYGLVPCL 241 Query: 244 QIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 Q + +G+L+ L P LYWH + + +++ ++ + H+ L Q Sbjct: 242 QASSLIEAGKLVRLAPQHKVEVNLYWHHWETAPSNAQAISELVVRHAHRALIQ 294 >UniRef50_Q46UY3 Regulatory protein, LysR:LysR, substrate-binding n=18 Tax=Proteobacteria RepID=Q46UY3_RALEJ Length = 306 Score = 242 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 103/296 (34%), Positives = 154/296 (52%), Gaps = 5/296 (1%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 DY L AL AVIRE FERAA+ L +T SA+SQRI+ LE G L+VR P RPTE Sbjct: 1 MLDYAALSALAAVIREGSFERAARALSVTPSAISQRIRLLEEKVGCTLVVRDQPCRPTET 60 Query: 63 GQKLLALLRQVELLEEEWL----GDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 G++L + +V LLE+E G + L +AVNADSLATW+ PA+A A++P Sbjct: 61 GRRLCQHIDRVRLLEQELQEALPALAPQGLARVTLPVAVNADSLATWIAPAIARFAAENP 120 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 + +++ V+D+ T E LR G V+ AV+ + C LG++ Y +S F ++F Sbjct: 121 VLMDVAVDDQDHTTEWLRCGAVLAAVTATARPAAGCNSSPLGSMRYRAAASPGFMRRHFA 180 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 +GV +L KAP + F+ D++ + ++ +P H + S+ AFV A G Sbjct: 181 DGVGAGSLAKAPSLVFNTKDELQARWARRLCHRHVE-LPRHTLPSAHAFVSAAIAGMGWG 239 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 + P IE L G L++L L+W S ++ ++ +L L Sbjct: 240 LHPESLIEPYLDDGALVELVADTPLDVPLHWQHARATSGLIEGLSREVLAAARVAL 295 >UniRef50_B8H9B0 Transcriptional regulator, ArgP, LysR family n=5 Tax=Actinomycetales RepID=B8H9B0_ARTCA Length = 315 Score = 241 bits (614), Expect = 3e-62, Method: Composition-based stats. Identities = 105/292 (35%), Positives = 155/292 (53%), Gaps = 5/292 (1%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 + L+AL AVI E FE AA L +T SAVSQRIK LE GQ L+ R VP PT+ G Sbjct: 2 NLEHLRALMAVIDEGTFEAAADLLRVTPSAVSQRIKALEASTGQVLVRRRVPCIPTDAGS 61 Query: 65 KLLALLRQVELLEEEWLGDEQTGST-PLLLSLAVNADSLATWLLPALAPVLADSPIRLNL 123 LL + RQV++LE E T + +L +A+NADSLATW +P LA L+L Sbjct: 62 VLLRMARQVQVLEAEASTALGTATASRAVLPVAINADSLATWFVPVLAVAATWQDTTLDL 121 Query: 124 QVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTR 183 VED+ + + LR+G+V+GAV+ + C V+ LG + Y+ V++ +++ Sbjct: 122 HVEDQGFSSQLLRQGDVMGAVTSDPVPVSGCRVELLGHMRYIPVAAAALRQRFAKGNTV- 180 Query: 184 SALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHL 243 + PV+ F+ D++ + L P H V SSE F+ + G M+P L Sbjct: 181 -DWARMPVLKFNAKDNLQRGLLAARGV--GQVPPTHTVPSSEGFLAAIKAGLGWGMLPEL 237 Query: 244 QIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 Q+ ELA G L+ L + LYW ++ +S +R++ +A+ D G LR Sbjct: 238 QLGNELADGSLVLLGKNAHEDVPLYWQSWSLDSERLRRMGEAVRDAGLGKLR 289 >UniRef50_A3K0M9 Chromosome replication initiation inhibitor protein n=1 Tax=Sagittula stellata E-37 RepID=A3K0M9_9RHOB Length = 290 Score = 240 bits (613), Expect = 4e-62, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 155/290 (53%), Gaps = 6/290 (2%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 D L AL+AV+R FE AA +L +T SA+SQRI+ LE+ G PL++R P TE G Sbjct: 3 DPAQLSALEAVLRLGAFEAAAAELNVTPSAISQRIRSLEDRVGAPLVLRQSPASATETGA 62 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQ 124 +L R+ LL + L + ++ + +A+NADSL TW +PALA + ++ Sbjct: 63 RLARHARECALL-DAALARDLGRASQARVRIALNADSLDTWAIPALAR----TDFLYDIA 117 Query: 125 VEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRS 184 +EDE+ + RLR G+V A++ + Q + C LG + Y+ S F +K+FP G+T Sbjct: 118 IEDESVSDRRLRDGDVTAAITSRVQPVQGCDAVPLGVMRYIATCSPAFRDKHFPEGLTED 177 Query: 185 ALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQ 244 L KAP+V + D + + +L + + P S P H + S+ FV+ AR G + P Sbjct: 178 TLSKAPMVDYSGKDVLQRRWLA-DLNGRPLSPPTHHLPSTHGFVEAARCGLGWGLNPLPL 236 Query: 245 IEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 + L SG+LI + P L + LYW + + +R +T AL VL Sbjct: 237 VADLLESGDLIAMAPDLPRDVPLYWQVRSITAPAIRPLTRALRRAAADVL 286 >UniRef50_P67665 Uncharacterized HTH-type transcriptional regulator Rv1985c/MT2039 n=16 Tax=Actinomycetales RepID=Y1985_MYCTU Length = 303 Score = 240 bits (612), Expect = 5e-62, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 149/288 (51%), Gaps = 7/288 (2%) Query: 8 TLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLL 67 L AL AV+ F+ AA++L +T SAVSQRIK LE GQ L+VR P R T G LL Sbjct: 10 QLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTAGIPLL 69 Query: 68 ALLRQVELLEEEWLGDEQTGST--PLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQV 125 L Q LLE E L + ++ +++AVNADS+ATW A + L++++ Sbjct: 70 RLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFS---AVFDGLGDVLLDVRI 126 Query: 126 EDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSA 185 ED+ + LR G +GAV+ + +P C V LG + YL V+S+PF +++ +G T +A Sbjct: 127 EDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDGFTAAA 186 Query: 186 LLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQI 245 KAP +A++ D + +++ F + P H V ++E F AR G M P Sbjct: 187 AAKAPSLAWNRDDGLQDMLVRKAFRRAI-TRPTHFVPTTEGFTAAARAGLGWGMFPEKLA 245 Query: 246 EKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 LA G + + + LYW + +S ++ ++TD + + Sbjct: 246 ASPLADGSFVRVC-DIHLDVPLYWQCWKLDSPIIARITDTVRAAASGL 292 >UniRef50_B2SEE8 Chromosome replication initiation inhibitor protein n=7 Tax=Francisella RepID=B2SEE8_FRATM Length = 306 Score = 239 bits (611), Expect = 8e-62, Method: Composition-based stats. Identities = 108/298 (36%), Positives = 164/298 (55%), Gaps = 6/298 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 DY+ +QAL VI ++ FE AA KL I+QSAVSQRIK LE FG P+L+R +P + T+ Sbjct: 1 MIDYKAIQALKEVIEQQSFELAADKLFISQSAVSQRIKSLETKFGAPVLIRILPYKVTKL 60 Query: 63 GQKLLALLRQVELLEEEWLGDEQT-GSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 GQ LL+LL +VELLE L +++ +T L +S+A+N DSL TW L L + + +R Sbjct: 61 GQDLLSLLTKVELLESSLLEEKKLIQNTKLQISIAINQDSLDTWFLDVLKVIDTTNLVRF 120 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 N + D+ T + L++GEV+ +S + C V+KLG ++YL V S F +KYF Sbjct: 121 NFKTFDQEMTLKSLQKGEVLSCISTMKKTAHGCYVEKLGEIEYLLVCSPYFHDKYFTKFK 180 Query: 182 TR-----SALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 R + L +AP + F+ D ++ F+++ + C+IV S + F Q+ QG Sbjct: 181 RRNKDWVNTLKQAPSLLFNQYDQLNSRFMEKFYGFQVDIDNCNIVPSVKGFKQMCLQGKG 240 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 ++P I E+ +GELI L L+WH + RK+ L+ + L Sbjct: 241 YALLPKSDIIDEIKNGELIILDDKCIWNMELFWHYWDLPDNNYRKIMTTLISESKQKL 298 >UniRef50_C6XMP9 Transcriptional regulator, ArgP, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XMP9_HIRBI Length = 294 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 91/296 (30%), Positives = 143/296 (48%), Gaps = 4/296 (1%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 + +A+ AVI+ FE AA +L +T SAVS R+K LE+ G L+ R+ P T Sbjct: 1 MISTKAARAVAAVIQTGSFEIAATQLGLTPSAVSHRVKLLEDQLGTILIRRSSPCTATPA 60 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGST-PLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G+K+ L+ + LLE E D ST + + +AVNADSL TW + ALA Sbjct: 61 GEKVHVYLQTIALLERELTRDLGIHSTDRVTVRIAVNADSLGTWFMSALAQ--NSDEFLF 118 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 ++ +ED+ T E L+ GEVVGA+ ++ + C LG + Y+ +S F K+FP+GV Sbjct: 119 DVIIEDQEVTSELLKSGEVVGALGMKEHTIAGCDELYLGNMPYVPCASPAFIAKHFPHGV 178 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 ++S+LL AP + F D + ++ Q + +P H + S F+ G M+P Sbjct: 179 SKSSLLSAPSLRFSPHDHLQDKWVAQYIEKNI-RLPIHKLPSFSVFIDGCLTGLGWGMLP 237 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 + LA L L L W S+ + + A+ + L+ + Sbjct: 238 KETVAPYLADKRLALLRENAELDTQLVWRWLRSASKALAPLNQAIRSSAKQTLKPN 293 >UniRef50_Q1GFE2 Transcriptional regulator, LysR family n=4 Tax=Rhodobacteraceae RepID=Q1GFE2_SILST Length = 306 Score = 237 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 100/295 (33%), Positives = 147/295 (49%), Gaps = 6/295 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 R D L AL AV+ F+ A+ L +T SA+SQRIK LE+ G PL+ R+ P TE Sbjct: 2 RYDPLQLAALSAVLDLGSFDAASAALGVTPSAISQRIKALEDRIGTPLVNRSSPCTGTET 61 Query: 63 GQKLLALLRQVELLEEEWLGD--EQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G ++ V LLE D + TP L LAVNADSLATW + A+ + Sbjct: 62 GLRIAKHAEDVALLERRLSRDLSLEGAETPARLKLAVNADSLATWFVEAMVA---AGDVL 118 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 +L ++D+ + + LRRG V AVS + + + C V LG L Y+ +S + ++FP G Sbjct: 119 FDLVIDDQDHSTDWLRRGVVSAAVSAEPRPVAGCDVHALGHLRYVATASPAYMARWFPGG 178 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 VT AP + F+ D + +L ++ P + P H ++S++AF+ A G M Sbjct: 179 VTPETASVAPCMVFNAKDRLQHRWLARHVA-PGLTPPSHALSSTQAFLDAAAAGLGWGMN 237 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 P E LASG L++L P LYWH + + ++T A+ L Sbjct: 238 PETLAEPHLASGALVELIPQSPLETPLYWHVSRIMAPALVEITQAVRRAASANLH 292 >UniRef50_C7QYI6 Transcriptional regulator, ArgP, LysR family n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7QYI6_JONDD Length = 292 Score = 236 bits (602), Expect = 8e-61, Method: Composition-based stats. Identities = 100/281 (35%), Positives = 146/281 (51%), Gaps = 6/281 (2%) Query: 16 IRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLALLRQVEL 75 + E F+ AA L I+ SA+SQRIK LE GQ LL RT P RPT G L RQ++ Sbjct: 15 VDEGSFDGAAAILRISPSALSQRIKALETTAGQVLLQRTKPVRPTPAGLPYLQAARQIDA 74 Query: 76 LEEEWLGD-EQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVEDETRTQER 134 + + L + P + +A+NADSL TW++PALA + + + +D+ T E Sbjct: 75 VLSQTLAQVDAVAPGPPDVPIAINADSLETWIIPALASIRDVANFH--IFRDDQDHTAEL 132 Query: 135 LRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSALLKAPVVAF 194 LR G V+ AV+ + C +LG + YL V++ FA ++FP+G+T +AL KAP V F Sbjct: 133 LRSGTVLAAVTSLADPIQGCESHRLGVMRYLPVATPDFAARWFPHGLTPAALEKAPTVVF 192 Query: 195 DHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIEKELASGEL 254 D D M L + + P V S+ AFV+ Q + P +QI++ LA+G L Sbjct: 193 DRKDKMQHRLL-HAYGVDPNIPARCYVPSATAFVEAVAQDMGWGLAPEIQIDEALATGSL 251 Query: 255 IDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 I L+ + LYW ++ ES + + L D LR Sbjct: 252 IHLSD--YVDVTLYWQQWKLESPALTVLRRTLADAAAYALR 290 >UniRef50_A4BE26 Chromosome replication initiation inhibitor protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BE26_9GAMM Length = 290 Score = 236 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 109/295 (36%), Positives = 160/295 (54%), Gaps = 6/295 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 DYR L AL AVI+ +GF+RAAQ L ++QSA+SQRIKQLE GQPL++R PP+ T Sbjct: 1 MLDYRALTALAAVIQHQGFDRAAQALHLSQSAISQRIKQLEGRIGQPLILRQSPPQATAL 60 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 G +L+ L V LE + +T + +A+N DSLATW AL + D I ++ Sbjct: 61 GLRLITHLETVLHLESDLNLPLET-DARIHARIAINHDSLATWFSEALGRITED--IDVD 117 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 L D+ E ++RGEV+ + + +A+ VD+LG + Y +S+ F ++ + Sbjct: 118 LITADQDAGIELMKRGEVMACLCAEGKAVNGGRVDRLGTMRYRAYASRDFLMRHH-LLES 176 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 L +AP + F+ D + FLQQ P ++ SSE FVQLA G MIP Sbjct: 177 FDRLYQAPCLVFNRDDRLQHRFLQQLGQAEPINLV--HCPSSEGFVQLAASGCGFGMIPE 234 Query: 243 LQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 +Q + G LIDL P F LYWH + + M+++ +++ H+ LRQD Sbjct: 235 IQAALSVQVGSLIDLAPETFIDVPLYWHSWRSSGQAMKQLRASVIKTAHRWLRQD 289 >UniRef50_C2AIB0 Transcriptional regulator, ArgP family n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AIB0_TSUPA Length = 297 Score = 230 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 107/296 (36%), Positives = 146/296 (49%), Gaps = 10/296 (3%) Query: 7 RTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKL 66 + L L AV+ E+ F AA +L ITQSAVSQRI+ LE G ++ R P RPT+QG L Sbjct: 5 QHLTTLVAVVEEQSFGAAAARLGITQSAVSQRIRALEQRVGHVVVTREGPCRPTDQGSVL 64 Query: 67 LALLRQVELLEEEWLGDEQTGSTP-LLLSLAVNADSLATWLLPALAPVLADSP-IRLNLQ 124 L L R V LE E LG G+ P +L + VNADSLATW +A RL LQ Sbjct: 65 LGLARGVATLEAEALGRLADGAGPAPVLDVGVNADSLATWFGSVIAAAAGWGDGTRLRLQ 124 Query: 125 VEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRS 184 V+DE T + LR G V+GAV+ + + C V+ LG + YL V + FA ++ G R Sbjct: 125 VDDENPTADLLRAGAVLGAVTTDPEPVQGCAVEYLGYMRYLPVCTPEFARRWNRGGWWR- 183 Query: 185 ALLKAPVVAFD-HLDDMHQAFLQQNFDLPPGS----VPCHIVNSSEAFVQLARQGTTCCM 239 + PVV FD DD+ L+ + P H + SSE F R G Sbjct: 184 -WREMPVVQFDLRKDDLQNRVLRWHGVTADPGTVDYPPAHRIPSSEGFAHAVRVGLGWGS 242 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 +P Q+ L G+L+ + L+W + +R ++TDA+ LR Sbjct: 243 LPEAQLGDALDRGDLVRVG-ERPVDVKLFWQSWRLHTRATGRLTDAIHAAAAVDLR 297 >UniRef50_D1BHX4 Transcriptional regulator, ArgP family n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BHX4_SANKS Length = 300 Score = 229 bits (585), Expect = 6e-59, Method: Composition-based stats. Identities = 101/302 (33%), Positives = 153/302 (50%), Gaps = 11/302 (3%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 M + L AL AV+ E FE AA L IT AVSQRIK LE GQ L+ R P T Sbjct: 1 MSPVELHHLAALAAVVDEESFEAAADALRITPPAVSQRIKALETTVGQVLVRRARPVTVT 60 Query: 61 EQGQKLLALLRQVELLEEEW---LGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 + G L L RQV L + + ++P ++ +A+N+DSL TW+L ALAP+ Sbjct: 61 DAGAPYLRLARQVAALVHDTEVEVAGAGQSTSPAVVPVAINSDSLGTWVLGALAPLSGA- 119 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 + ++ ED+ + LR G V+ AV+ + + C V +LG + Y V+S+ FA+++F Sbjct: 120 -VSFDIHREDQDHSAALLRDGTVMAAVTTASRPVQGCTVSRLGVMTYRVVASRVFADRWF 178 Query: 178 -----PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLAR 232 +G +L APVV FD DD+ A+L+ +P P H V SS + R Sbjct: 179 SEPPASDGPDVDSLRAAPVVVFDRKDDLQDAYLRAR-GVPAAVPPRHHVPSSADYADAVR 237 Query: 233 QGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHK 292 G ++P Q +L SG L++L P MLYW +++ + + + + A+ + Sbjct: 238 LGMGWGLLPDQQCLDDLRSGALVELDPEHRTDVMLYWQQWSLRTSALDQTSAAVHAAAAR 297 Query: 293 VL 294 L Sbjct: 298 HL 299 >UniRef50_P94632 Lysine export transcriptional regulatory protein lysG n=5 Tax=Corynebacterium RepID=LYSG_CORGL Length = 290 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 150/288 (52%), Gaps = 3/288 (1%) Query: 8 TLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLL 67 L L ++I E FE A+ L I+ SAVSQR+K LE+ G+ L+ RT P + TE G+ L+ Sbjct: 5 QLDTLLSIIDEGSFEGASLALSISPSAVSQRVKALEHHVGRVLVSRTQPAKATEAGEVLV 64 Query: 68 ALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVED 127 R++ LL+ E + L++A+NADSL+TW P V + L L++ED Sbjct: 65 QAARKMVLLQAETKAQLSGRLAEIPLTIAINADSLSTWFPPVFNEVASWGGATLTLRLED 124 Query: 128 ETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSALL 187 E T LRRG+V+GAV+ + + C V +LG + +L +++ + Y +G + Sbjct: 125 EAHTLSLLRRGDVLGAVTREANPVAGCEVVELGTMRHLAIATPSLRDAYMVDG--KLDWA 182 Query: 188 KAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIEK 247 PV+ F D + L D P G IV S+E F + R+G ++P Q Sbjct: 183 AMPVLRFGPKDVLQDRDLDGRVDGPVGRRRVSIVPSAEGFGEAIRRGLGWGLLPETQAAP 242 Query: 248 ELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 L +GE + L + +YW R+ ESR + ++TDA++D + LR Sbjct: 243 MLKAGE-VILLDEIPIDTPMYWQRWRLESRSLARLTDAVVDAAIEGLR 289 >UniRef50_C7NH55 Transcriptional regulator, ArgP family n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NH55_KYTSD Length = 313 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 103/304 (33%), Positives = 157/304 (51%), Gaps = 11/304 (3%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 M D L L A +RE FERAA+ L +T SAVSQR++ LE+ G L+ RT P RPT Sbjct: 1 MDVLDPVGLTTLQAAVREGTFERAAKHLNVTPSAVSQRMRALESAVGAVLVSRTKPIRPT 60 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPL---------LLSLAVNADSLATWLLPALA 111 G+ LL+L Q LL +E +G P + +A AD+LA LLPA+A Sbjct: 61 SDGEVLLSLALQWSLLRQEAVGQLTASQVPGGGAGARQRITVPIATGADALALVLLPAMA 120 Query: 112 PVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKP 171 + + P+ + ED+ + + LR+G VV A+S +P LG L YL +++ Sbjct: 121 QLEREVPVTFEVFREDDAHSVDLLRQGRVVCALSSDTVPVPGHRAQTLGTLRYLPLATPE 180 Query: 172 FAEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLA 231 + E+Y P G T AL APVV FD DD+ A+L++ + P V ++ F + Sbjct: 181 YVERYLPEGPTAEALADAPVVCFDRKDDLQHAYLRRLVE-QDLRPPVTYVPANREFEEAV 239 Query: 232 RQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGH 291 G ++P ++++ LASG+L+ + PG ++ L WHR S ++ + + L Sbjct: 240 LLGLGWGLVPQGRVDEHLASGQLVRIGPG-YRDVPLVWHRPRITSAVLDALGERLAAVAL 298 Query: 292 KVLR 295 V+R Sbjct: 299 DVVR 302 >UniRef50_C7QF32 Transcriptional regulator, ArgP, LysR family n=33 Tax=Actinomycetales RepID=C7QF32_CATAD Length = 315 Score = 227 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 95/318 (29%), Positives = 152/318 (47%), Gaps = 26/318 (8%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 M ++ L + FE AA+ L +T SAVSQRIK LE G+ LLVR+ P RPT Sbjct: 1 MTDLPLDHVRTLLVAVDAGTFEAAARILHVTPSAVSQRIKALEQRTGRVLLVRSKPLRPT 60 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQ-------------------TGSTPLLLSLAVNADS 101 E G ++ RQ+ LE+ + + + LS+AVN+DS Sbjct: 61 ESGVAVVRFARQLAWLEDAARAELGLAGADQADAAHDAHAADGTSAAPVQTLSIAVNSDS 120 Query: 102 LATWLLPALAPVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGA 161 L+TW A ++ + +L ED+ T E LR G V+ A+S + + C+V LG Sbjct: 121 LSTWFPEVTARFSPEAAVCFDLHREDQDYTDELLRAGLVMAAISSSPKPVQGCVVRPLGR 180 Query: 162 LDYLFVSSKPFAEKYFPNGV----TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVP 217 + Y V++ F ++ P GV +AL APV+ F+ DD+ FL+ P S P Sbjct: 181 MRYRAVATHGFVRRWLPGGVGATDLAAALAVAPVIIFNRKDDLQDGFLRGIGA--PASGP 238 Query: 218 CHIVNSSEAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESR 277 H + +++A++ G +IP +Q ++ EL++L PG LYW ++ Sbjct: 239 RHYLPATDAYLYAVESGYGWGLIPDVQAKQF-GQVELVELAPGRPVDVPLYWQQWRLAPP 297 Query: 278 MMRKVTDALLDYGHKVLR 295 M+ +V + ++ + L Sbjct: 298 MLTEVGEVAVEVAARRLA 315 >UniRef50_B9NY95 Chromosome replication initiation inhibitor protein n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NY95_9RHOB Length = 293 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 91/293 (31%), Positives = 144/293 (49%), Gaps = 5/293 (1%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 D++ L+ L +I E FE AA+KL +T AVSQRI++LE +PLLVR PP TE Sbjct: 1 MIDHKDLKCLVEIIDEGSFEAAARKLNVTPGAVSQRIRRLEAQVRKPLLVRRQPPYLTES 60 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPL-LLSLAVNADSLATWLLPALAPVLADSPIRL 121 G+KL++ R++ L E + P+ +S+A+N DSL W L AL + I + Sbjct: 61 GEKLMSYARRIWQLHNEMDRNVLNEPNPVETISVAINHDSLGDWFLSALHAFTNATGIYV 120 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 L D +T E ++G+V+ AV+ +P C LG L Y V +K FA +YF +G+ Sbjct: 121 ELTSTDSEQTDELFQKGQVLAAVTSSPNTIPGCKSKLLGPLSYQAVCTKAFAARYFEDGI 180 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 ++L +AP + +D D + Q L ++F + G P H + + +Q R G +P Sbjct: 181 NATSLRQAPALYYDRRDRVTQGVL-KHFGVRKGETPHHYIPGTAELLQATRMGLGWSTVP 239 Query: 242 HLQIEKELASGE-LIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 + GE + L G Q L+W + S + ++ + Sbjct: 240 SGYLR-MFGQGETWVQLYSGKIQT-ELHWKTWDLASDEIEALSRHVFQTAKDY 290 >UniRef50_Q123B5 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=Q123B5_POLSJ Length = 309 Score = 223 bits (569), Expect = 5e-57, Method: Composition-based stats. Identities = 101/298 (33%), Positives = 146/298 (48%), Gaps = 9/298 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 D R L AL AVI F AA+ L +T +AVS RIK LE+ GQ LLVR PT Sbjct: 1 MLDARQLDALAAVIEHGSFGAAAKALSLTLAAVSLRIKSLEDALGQRLLVRGKQLHPTPA 60 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPL-------LLSLAVNADSLATWLLPALAPVLA 115 GQ LL ++Q+ L E + L Q G P LS+AVNADSL W L +AP L Sbjct: 61 GQALLGHVKQLRLQEADLLAHLQGGRRPGAKAVPLQSLSVAVNADSLTGWFLAGVAPALE 120 Query: 116 DSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEK 175 + L++ V+D+ T + L+ G+V G V+ Q++ C+ + LG + Y V++ K Sbjct: 121 KHRLLLDIVVDDQDHTHDALKNGDVSGCVTTLAQSMRGCVAEPLGVMRYHCVAAPALVAK 180 Query: 176 YFPNGVTRSA--LLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQ 233 + T +A LL +P V F+ D + AFL Q+F+L P H V + +AF Sbjct: 181 WRTGKETVAAQRLLASPAVIFNRKDALQDAFLAQHFNLRDALYPRHFVPAVDAFELALEL 240 Query: 234 GTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGH 291 G M+P + L ++ PG LYW + E +++T A+ + Sbjct: 241 GLGWGMVPEQHLAARAHRPPLAEVLPGKTVDVALYWQHWTREPVPAQRLTRAVKEAAR 298 >UniRef50_A2SLN2 Transcriptional regulator, LysR family n=14 Tax=Burkholderiales RepID=A2SLN2_METPP Length = 312 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 105/278 (37%), Positives = 149/278 (53%), Gaps = 8/278 (2%) Query: 19 RGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLALLRQVELLEE 78 FERAAQ+L ITQSAVSQR++ LE+ GQ L+VR P R TE G+ LL RQ++ + Sbjct: 19 GSFERAAQRLSITQSAVSQRLRALESQVGQLLVVRARPLRLTEPGKVLLRFARQLQAMRA 78 Query: 79 EWLGDEQTG-STPLLLSLAVNADSLATWLLPALAPVLAD---SPIRLNLQVEDETRTQER 134 + + + L +AVNADSLATW+LPAL ++ L L V+D+ T E Sbjct: 79 DVARELGERMQSQARLPIAVNADSLATWVLPALDGLVQQGLKDGFGLELIVDDQDFTHEW 138 Query: 135 LRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF----PNGVTRSALLKAP 190 LR+G+V+G VS QAL C V+ LG + Y+ V+S F + G+ R + P Sbjct: 139 LRQGQVLGCVSTVPQALRGCRVEPLGVMRYIAVASPGFVARELGGDAAAGLHRGNFARVP 198 Query: 191 VVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIEKELA 250 + F+ DD ++ Q F + + V SSEA+V+ A G ++P LQ+ + LA Sbjct: 199 FLVFNRKDDTQTQWVAQAFGVRAPRLEERFVPSSEAYVRAAALGWGIGVVPELQVRERLA 258 Query: 251 SGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLD 288 GEL+ L P + LYWH++ V A LD Sbjct: 259 QGELLCLRPDIGIEVALYWHQWKLGDDSGLPVRAARLD 296 >UniRef50_UPI0001BC2B66 transcriptional regulator, ArgP, LysR family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI0001BC2B66 Length = 316 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 91/312 (29%), Positives = 137/312 (43%), Gaps = 28/312 (8%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 + ++AL AV+ E E A L +T SA SQRI+ LE+ GQ L+ RT P TE G+ Sbjct: 7 NIDHVKALAAVVDEGTVEGGAFVLGVTPSATSQRIRTLESRIGQVLIRRTNPITVTEAGE 66 Query: 65 KLLALLRQVELLEEEWLGDE--------------------QTGSTPLLLSLAVNADSLAT 104 +L R++ELLE E + Q P +L + VNADSL+T Sbjct: 67 AVLKYAREIELLESETMDRLHGIDIDAPDGIGKDAGAAPNQRRRVPTVLRIGVNADSLST 126 Query: 105 WLLPALAPVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDY 164 W P A V I + ++V D+ + L GEV+G ++ V KLG++ Y Sbjct: 127 WFRPIFAEVAGWDDIVIRIEVADQDKALPLLTSGEVLGTITSAEVGGYGTQVQKLGSMRY 186 Query: 165 LFVSSKPFAEKYFPN----GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHI 220 + V++K KY L P+V F DD+ +L++ P + Sbjct: 187 VAVATKGLLAKYGAEVDGGSFAEVDLGSLPMVNFGKDDDLQFTYLRRAGVTTI--PPMSV 244 Query: 221 VNSSEAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMR 280 V SS F G +IP Q+ S +L+ L+ LYWH + S + Sbjct: 245 VPSSWEFAAAVEAGVGWGLIPITQLGDL--SKDLVPLSSEPNIDVPLYWHHWNLASEKLG 302 Query: 281 KVTDALLDYGHK 292 ++T+AL + Sbjct: 303 RLTEALHRAAAQ 314 >UniRef50_C3PFW1 Lysine export transcriptional regulatory protein n=9 Tax=Corynebacterium RepID=C3PFW1_CORA7 Length = 294 Score = 216 bits (551), Expect = 6e-55, Method: Composition-based stats. Identities = 96/287 (33%), Positives = 141/287 (49%), Gaps = 9/287 (3%) Query: 10 QALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLAL 69 + L A+I E FE AA L IT SAVSQRIK LE G+ LL R P TE G+ + Sbjct: 7 ETLLAIIDEGSFEGAATVLGITPSAVSQRIKALEVSTGRILLRRGTPVTVTEAGEIVAQA 66 Query: 70 LRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVEDET 129 R++ L++ E + + L++A+N+DSLATW P + L +++EDE Sbjct: 67 ARRMALVQAEADARLTERLSRVPLTVAINSDSLATWFRPVIQQTAQRGEAALRIRIEDEA 126 Query: 130 RTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSALLKA 189 RT LRRG+V+GAV+ + + C LG + Y V++ AE T Sbjct: 127 RTLAMLRRGDVLGAVTREQTPVSGCESTYLGTMRYFAVAAPALAE-------TFEDWETL 179 Query: 190 PVVAFDHLDDMHQAFLQQNF-DLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIEKE 248 P+V F D +++ F D + SSE++V+ R G ++P LQ + Sbjct: 180 PIVGFGPNDATLDDAMRERFIDSHVLRARVSQIPSSESYVEAVRYGLGWGLVPRLQAQPL 239 Query: 249 LASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 L +GEL+ L LYW R+ ES ++ +T +LD G VL Sbjct: 240 LETGELV-LLDDFPLDIDLYWQRWRLESEVLADLTADVLDAGRAVLA 285 >UniRef50_A0JRX4 Transcriptional regulator, LysR family n=2 Tax=Micrococcaceae RepID=A0JRX4_ARTS2 Length = 293 Score = 216 bits (550), Expect = 9e-55, Method: Composition-based stats. Identities = 92/297 (30%), Positives = 145/297 (48%), Gaps = 6/297 (2%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 M + L A++ + F+ AA L +T SAVSQRI+ LE G+P+L RT P T Sbjct: 1 MIDIHPDQARTLAAIVSQGSFDAAASHLSVTASAVSQRIRALEVAVGRPVLRRTRPIELT 60 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPL--LLSLAVNADSLATWLLPALAPVLADSP 118 + GQ ++ RQ+E+L + + Q G+ L+L +N+DSL TW Sbjct: 61 DSGQAVVRFARQLEMLSADLADELQPGNPHPDTRLTLVINSDSLHTWA--LAGLAAVAGT 118 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 ++L + ED+ + E LR G A++ + P C +LG + YL V + FA +F Sbjct: 119 VQLEILREDQDYSLELLRSGAAAAAITATAKPAPGCTSRRLGIMRYLPVCTPAFAGTWFD 178 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 G T +L APV+ FD DD+ +L++ F P P H V ++ F + R G Sbjct: 179 GGATAESLATAPVIIFDRKDDLQDRYLRR-FSRKPVQPPRHYVPAAHEFGEAIRLGMGWG 237 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 ++P L+I +L G L + F L+W ++ S ++ V A + +VLR Sbjct: 238 LLPELEIGDDLGQGTLQLMASRSFVDVPLHWQQWRYGSAVLDGVAAA-IQGAARVLR 293 >UniRef50_A3TNV7 Chromosome replication initiation inhibitor protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TNV7_9MICO Length = 313 Score = 214 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 92/292 (31%), Positives = 139/292 (47%), Gaps = 5/292 (1%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQ 64 + ++AL A++ FE AA+ L +T SAVSQR++ LE+ GQ ++ R P TE G Sbjct: 2 NLDQVRALAAIVDSGSFESAARTLHLTPSAVSQRVRALESSVGQVVVRRAHPCTATEAGA 61 Query: 65 KLLALLRQVELLEEEWLGDE-QTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNL 123 L+ L RQVELLEEE T P+ L +A+NADSL TWL+ L + RL Sbjct: 62 VLVRLARQVELLEEESHDLLGMTREAPVALRMAINADSLDTWLVRLLEAAAGWTDTRLRF 121 Query: 124 QVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTR 183 + DE T LR GEV V+ + + +P C LG + YL V+S A ++ G Sbjct: 122 SIADEHHTLALLREGEVAAVVAAESEPVPGCRSFPLGVMRYLPVASPSLAARFTLPGGAI 181 Query: 184 SALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHL 243 + PV+ + DD FL + P + S+ G ++P Sbjct: 182 D-WEEMPVLGYGDHDDAQGQFLAARG--WSTASPASQIPSAMGLRAALLAGMGWLLVPES 238 Query: 244 QIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 + +LA G ++ LT L+WH + S + ++ DA+++ LR Sbjct: 239 SVGDDLAEGRVVTLTDE-VVDVGLHWHVWKVPSHRLERLNDAVVEAARVGLR 289 >UniRef50_C5C7I2 Transcriptional regulator n=3 Tax=Actinomycetales RepID=C5C7I2_MICLC Length = 307 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 97/295 (32%), Positives = 137/295 (46%), Gaps = 6/295 (2%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 + R + L+AL A + F+ AA L I+ SA SQRIK LE GQ LL RTVP RPT Sbjct: 6 LDRMNSDHLRALVAAVDHGTFDAAADSLRISGSAFSQRIKALERQVGQVLLARTVPVRPT 65 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLL-LSLAVNADSLATWLLPALAPVLADSPI 119 G++LL L RQ LE+E L G + L +A+NADSL TW P L + Sbjct: 66 AAGERLLRLARQTLALEDEALAALGRGDGGRVPLRVALNADSLDTWWEPVLREAATWDDV 125 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 L +Q ED+ T LR G VV AV+ + C LG + Y V + F + + Sbjct: 126 VLQMQSEDQEHTAVLLRDGAVVAAVTDDPTPVAGCSSTPLGTMRYHAVCAS-FLLELHRD 184 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQ-NFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 R P+V + D + + L++ P P H+V S A+++ G Sbjct: 185 ARGRVDFGSLPIVDYGPRDGLQRTVLRRVTRGRPAIVPPTHLVPSVHAYLRAVELGLGWG 244 Query: 239 MIPHLQIEKELASGELIDLTPGLFQ---RRMLYWHRFAPESRMMRKVTDALLDYG 290 M+P QI + G DL P L+W R+ + + ++TDA+L Sbjct: 245 MLPSAQIPPGVLEGRHPDLEPIPALGAADVHLHWQRWTAGTAALDRLTDAVLRAA 299 >UniRef50_A4JNN0 Transcriptional regulator, LysR family n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JNN0_BURVG Length = 327 Score = 209 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 84/297 (28%), Positives = 141/297 (47%), Gaps = 2/297 (0%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 D + L+A V+ R FERAA++L IT++A+SQRIK LE+ LLVR+ P T Sbjct: 1 MLDRQQLEAFAVVVETRSFERAAERLNITRAAISQRIKALEDALAAALLVRSKPLALTPV 60 Query: 63 GQKLLALLRQVELLEEEWLG--DEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G+ L V LLE + D + + L++ V+A S+ W ++ + + Sbjct: 61 GEVLFKHTTAVRLLEADTFSQIDRRGNRGGMQLAVGVDAYSIDAWFGRVAHRIIERNVLE 120 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L + V+D L RGE+VG+VS + + C+ LGA+ Y V+S F E++F G Sbjct: 121 LEVVVDDADPAFPALARGEIVGSVSTVSRPVQGCIAVPLGAMIYRCVASSAFIERHFEKG 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 A AP V + + + F + G +++ S + ++ + G M+ Sbjct: 181 FNLHAASLAPAVEVGRRTALLERYFDAAFGVSVGRYRRNLLPSIASQLKTIQSGLGYGML 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 P + L G L+D+ + LYWHR+ + +++ L++ +VL D Sbjct: 241 PEQTVLPFLEDGRLVDVRHDMPLPVPLYWHRWRAAPPVCETLSEELVNRAREVLAAD 297 >UniRef50_B7RUK1 LysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RUK1_9GAMM Length = 296 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 71/297 (23%), Positives = 124/297 (41%), Gaps = 12/297 (4%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPP 57 M R P +L+A + R F A+ +L +T +AVS ++K LEN G L +R T Sbjct: 1 MSRSLPPLNSLRAYECAARHMSFSLASAELNVTPAAVSHQVKLLENHLGVSLFIRLTRKL 60 Query: 58 RPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 R T G++LL + + L E + S +L+L + A WL P L Sbjct: 61 RLTTAGERLLPEVSEAFLKLREAVNTVDPNSANDVLTLRLGPSLAARWLSPRLHLFWQQF 120 Query: 118 P-IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY 176 P I L L + R ++ A++ + P + L +D+ V S Sbjct: 121 PTIDLRLYHSNSPVN---FDREDIDLAITYGAGSWPGVIASPLLDIDFYPVCSPKLVGTE 177 Query: 177 FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 + T + LL ++ H DD +A+L+Q+ I++ + +Q A G Sbjct: 178 SASS-TPALLLNHTLLHDAHYDDW-EAWLKQSDMPQINPRRGIIIDDTNVLIQAALDGQG 235 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYW---HRFAPESRMMRKVTDALLDYG 290 + L +++ L +G L+ L + M Y+ + + +++V + LL G Sbjct: 236 IALCSTLFVQEHLDAGRLVRLFDTKLKNDMAYYIVCPKGHLQRPAVKEVKNWLLSQG 292 >UniRef50_D0J1E9 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J1E9_COMTE Length = 321 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 60/303 (19%), Positives = 115/303 (37%), Gaps = 11/303 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPT 60 K P L+A + R F +AA++L +T SAVS ++K LE G L VR + T Sbjct: 20 KIPPLNPLRAFEVSARHMSFTKAAEELFVTPSAVSHQVKSLEENLGIALFVRDSKTLTLT 79 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G+ L +++ E + LL + + WL+P L+ ++ + Sbjct: 80 PAGKAYLPGVQEAFRQLEVATYQLHREKSTALLKINLPPTFAVKWLIPRLSRFASEH-LD 138 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L+L+V + R +V + + + ++ V S + P+ Sbjct: 139 LDLKVSTS-KLMADFSRDDVDMEIRYGRGVYAGLYSEMVLPVEVFAVCSPAL--QQGPHP 195 Query: 181 VTRSALLKAPVVAFDHLD------DMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQG 234 + A L++ V+ D +L + S + A G Sbjct: 196 IRDFADLRSHVLLHDDSTYDDVSNPNWATWLAHMGVHDINATRGPSFWPSHLVIDAAIDG 255 Query: 235 TTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 ++ ++++LASG+L+ L P ++ P+SR+ + +D+ L Sbjct: 256 QGVALVKKSWVQQDLASGKLVRLFPEYSLPIEFAYYLVFPQSRLGDPRITSFVDWMRAEL 315 Query: 295 RQD 297 +D Sbjct: 316 ARD 318 >UniRef50_A8TN53 Transcriptional regulator, LysR family protein n=2 Tax=Proteobacteria RepID=A8TN53_9PROT Length = 312 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 63/299 (21%), Positives = 110/299 (36%), Gaps = 7/299 (2%) Query: 1 MKR-PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-R 58 M+R P +L+A +A R F +AA +L +TQ+A+S +IK LE G L R Sbjct: 1 MRRLPPLNSLRAFEAAARHLSFTKAAGELHVTQAAISHQIKSLEEWLGMVLFKRQNRALL 60 Query: 59 PTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 T+ GQ L LR+ + + L+++ A WL+P L + P Sbjct: 61 LTDAGQAYLPPLREAFDRIHDATAKLRERDKSGALTVSTFTSFAAKWLVPKLGRFASGHP 120 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 + +++ + V + ++L V S + P Sbjct: 121 -DIEVRLAINDVLVD-FGSDAVDVGIRYGRGDWRGLRTERLMTEVVFVVCSPRLLD--GP 176 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 +T L+ + D L + +L+ P + N SE +Q A G Sbjct: 177 APLTCPEELRYHTMLHDDLPEDWDTWLEAAGAGPIKARRDLAFNHSEMVLQAAIDGLGVA 236 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 + + + +LA+G L+ + Y+ PE R A D+ + +D Sbjct: 237 LGRSVLVADDLAAGRLVKPFDLELPTQAAYY-LVYPEGTQERPKVKAFRDWVTSEVARD 294 >UniRef50_A5V6Y9 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V6Y9_SPHWW Length = 305 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 68/301 (22%), Positives = 118/301 (39%), Gaps = 11/301 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPT 60 K P L+ + V R F RAA +LC+TQ+AVS +IK LE G PL R + + T Sbjct: 4 KLPPLLGLRVFECVARHLSFTRAADELCVTQAAVSHQIKALEEWMGGPLFQRLSRTIKLT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 E G+ L+A + Q + + G + L++ V + W++P LA P Sbjct: 64 ELGESLVAPIGQALDIMADATGRALDRDQNVPLTVGVFDSFSSAWIIPRLARFRERFPA- 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 ++++ + + + L G+ + + + P+ V++L L V S E++ G Sbjct: 123 VDVRFIAKRQEDDALSSGDADIEIRFGNGSWPNFQVERLLTESVLPVCSPALIERHGAPG 182 Query: 181 VTRSALLKAPV--VAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 +L AP + D FLQ + S Q G Sbjct: 183 ----SLADAPRFPLLHDVFSIDWSEFLQYFGVRGANVHRGFGFSHSHLVKQACIDGQGIA 238 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYW---HRFAPESRMMRKVTDALLDYGHKVLR 295 + + ++L SG L+ P + Y+ + + ++ LLD + Sbjct: 239 LGRWPLVAEDLESGALVRPFPEVLALDSAYYIVCRKAVSDEANIKAFAYWLLDEAELFVS 298 Query: 296 Q 296 Q Sbjct: 299 Q 299 >UniRef50_B3R274 Transcriptional regulator of glycine cleavage system operon, LysR family n=1 Tax=Cupriavidus taiwanensis RepID=B3R274_CUPTR Length = 308 Score = 199 bits (507), Expect = 9e-50, Method: Composition-based stats. Identities = 60/306 (19%), Positives = 109/306 (35%), Gaps = 14/306 (4%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP- 57 M R P L+A + R F RAA++L +T SAVS +IK LE G L +R Sbjct: 1 MSRQIPPLNPLRAFEVAARHLSFTRAAEELFVTPSAVSHQIKALEESLGVQLFIRDAKAL 60 Query: 58 RPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 T G L ++ + + P L + + WL+P + + Sbjct: 61 VLTPAGTAYLPSVQLAFKQLADATHRLHSKDRPA-LKVNMPPTFAVKWLIPRMDRFMKAH 119 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 P ++L+V + R + A+ P + A++ + V S ++ Sbjct: 120 P-DIDLKVSTSNHRID-FERDDFDMAIRYGRGDYPGLHCELCMAVEVIPVCSPAL--RHG 175 Query: 178 PNGV-TRSALLKAPVVAFDH-----LDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLA 231 P + T S L ++ D + +L+ + S + A Sbjct: 176 PQPLETPSDLKHHTLLHDDSTYTDVSNPDWAMWLEHAGVTDVDASRGPSFWPSHLVINAA 235 Query: 232 RQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGH 291 G ++ IE++LA G L+ L + + P+ R+ + + D+ Sbjct: 236 LNGLGVALVKKNWIEQDLAEGRLVRLFESIRLPVEFSYFVVFPKERLEDRRIRSFTDWIR 295 Query: 292 KVLRQD 297 + D Sbjct: 296 AEVSAD 301 >UniRef50_B2JXM7 Transcriptional regulator, LysR family n=4 Tax=Burkholderia RepID=B2JXM7_BURP8 Length = 311 Score = 196 bits (499), Expect = 7e-49, Method: Composition-based stats. Identities = 88/296 (29%), Positives = 137/296 (46%), Gaps = 3/296 (1%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 + L+ AV+ R F +AA L I+ +A ++R+K+LE G LL+R PT+ Sbjct: 8 MLNMLELETFAAVVEHRSFAQAASALSISSAAATRRVKRLEQSMGALLLLREPAVLPTKA 67 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLA-VNADSLATWLLPALAPVLADSPIRL 121 G+++ V L E+E L G VNADSLATW P + LA + L Sbjct: 68 GEEVFRHFMTVRLHEDELLRRVMPGRAATTALALAVNADSLATWFEP-VTRELAQHHVAL 126 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQAL-PSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + V+D+ T E L RG+V G +S Q + + + +G + Y V++ F +YF G Sbjct: 127 EIVVDDQDHTLEALARGDVKGFLSTQPEPVVDRFVAAPVGQMRYQCVATPGFEREYFAGG 186 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 +T L+A + FD D +H AF F + G P H S A + ++ Sbjct: 187 LTLPGALEATAILFDRKDALHDAFFASYFGVTVGRYPRHYFPSPVALLNAILDELGYGLV 246 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 P +Q E + SG L+ L P LYWH + E + ++ ++ + L Q Sbjct: 247 PAMQAEPLIGSGRLVALAPAHDLLIDLYWHHWEEEPEPLATISALVMAAARRSLVQ 302 >UniRef50_Q2BQI7 Hypothetical D-serine deaminase activator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQI7_9GAMM Length = 310 Score = 193 bits (490), Expect = 7e-48, Method: Composition-based stats. Identities = 70/293 (23%), Positives = 114/293 (38%), Gaps = 12/293 (4%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQGQ 64 LQ + + F RAA +L +TQ A+SQRI++LE G L +R + T +G+ Sbjct: 14 LANLQCFSSAAKHLSFTRAADELNLTQGAISQRIRKLEEQLGFALFLRYNRRLQLTAEGE 73 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQ 124 +LL + + D T LSL+ + WLL LA P ++ + Sbjct: 74 RLLIQTNNSLTELDNLIRDIHTQGLAGELSLSTPPSFASEWLLEKLADFSQHFP-QIFFR 132 Query: 125 VEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY----FPNG 180 +E +R + ++ A+ P + L + V + FA+KY P Sbjct: 133 METHSRLVDFFSE-QIDLAIYYGQGEYPGLVCWHLMDEQLIPVCTPEFAKKYDLWSRPEQ 191 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + LL + ++ + L H + SE V+ A+ G + Sbjct: 192 LNHCHLLHDAQAWPEAGPYSEWSYWAERQSLNLELKQGHCFDKSEHAVKAAKAGLGVAIG 251 Query: 241 PHLQIEKELASGELIDLTPGLF-----QRRMLYWHRFAPESRMMRKVTDALLD 288 IEK L +GELI+ GL Q L H E +++ + LL Sbjct: 252 RKQLIEKYLNNGELINPFDGLPSVLSQQNYYLVTHEDRKEQPIIKAFREWLLK 304 >UniRef50_P0A9F8 Glycine cleavage system transcriptional activator n=206 Tax=Gammaproteobacteria RepID=GCVA_ECO57 Length = 305 Score = 192 bits (489), Expect = 9e-48, Method: Composition-based stats. Identities = 61/269 (22%), Positives = 110/269 (40%), Gaps = 5/269 (1%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPT 60 + P L+ DA R F RAA++L +TQ+AVS +IK LE+ G L R T Sbjct: 4 RLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSLLLT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 E+GQ ++++ E Q S L++++ WL+P L+ + P Sbjct: 64 EEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLLPSFAIHWLVPRLSSFNSAYP-G 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 ++++++ R +++L +V A+ P V+KL A L V S P Sbjct: 123 IDVRIQAVDRQEDKLAD-DVDVAIFYGRGNWPGLRVEKLYAEYLLPVCSPLLLTGEKPLK 181 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 T L K ++ D + +Q I + S +Q A G + Sbjct: 182 -TPEDLAKHTLLHDASRRDWQT-YTRQLGLNHINVQQGPIFSHSAMVLQAAIHGQGVALA 239 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYW 269 ++ + E+ +G L+ + + ++ Sbjct: 240 NNVMAQSEIEAGRLVCPFNDVLVSKNAFY 268 >UniRef50_Q2CJD7 Putative uncharacterized protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CJD7_9RHOB Length = 294 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 100/294 (34%), Gaps = 8/294 (2%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP- 57 M R P L+ +AV R F AA +L +TQSAVS+ IK LE L R Sbjct: 1 MSRALPSLNALRTFEAVSRHGSFTNAADELNVTQSAVSRMIKGLEEHLELQLFERAGRQI 60 Query: 58 RPTEQGQKLLA-LLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLAD 116 R TE G + + +++LE T + LS+ + WLLP L + Sbjct: 61 RLTEDGVYYSEKISKAMDILEVASRELIDTKAGRGTLSIGMLPTFGTKWLLPRLGSFMQL 120 Query: 117 SPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY 176 P + + A+ + P + L + + V S + Sbjct: 121 HPELTVDVTSSDGELD--FADERIDVAIRFGYGNWPGARAEPLMSEELQVVCSPRIMDGP 178 Query: 177 FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 +P + L + ++A +LQ G + +Q A+ G Sbjct: 179 YPL-TDYAQLRRHSLIAHSSRPGTWSHWLQAVGASTEGYDKGLRLEHFYMVLQAAKSGLG 237 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG 290 ++P ++A+G L P Y+ P + A ++ Sbjct: 238 IGLLPSYLAADDIANGSLTAPFPVRVVSPGGYY-LVTPWDKTDLPRVQAFREWV 290 >UniRef50_A7FFF5 Glycine cleavage system transcriptional activator n=45 Tax=Proteobacteria RepID=A7FFF5_YERP3 Length = 305 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 59/269 (21%), Positives = 110/269 (40%), Gaps = 5/269 (1%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPT 60 + P L+A DA R F +AA++L +TQ+AVS +IK LE+ G L R T Sbjct: 4 RLPPLNALRAFDAAARHLSFTKAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSLLLT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 E+GQ ++++ E Q S L++++ WL+P L+ A P Sbjct: 64 EEGQSYYLDIKEIFTSINEATRKLQARSAKGALTVSLPPSFAIQWLVPRLSGFNAAYP-G 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 ++++++ R +++L +V A+ ++L A L V + Sbjct: 123 IDVRIQAVDREEDKLAD-DVDVAIFYGRGNWSGLRTERLYAEFLLPVCAPSLLTGENGLK 181 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 V S L ++ D A+ +Q I + S VQ A G ++ Sbjct: 182 V-PSDLANHTLLHDTSRRDW-LAYTRQLGVPQINVQQGPIFSHSAMVVQAAVHGQGIALV 239 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYW 269 ++ + E+ +G L+ + + ++ Sbjct: 240 NNVMAQSEIEAGRLVCPFNDVLVSKNAFY 268 >UniRef50_A6VD26 Transcriptional Regulator, LysR family n=27 Tax=Gammaproteobacteria RepID=A6VD26_PSEA7 Length = 309 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 69/296 (23%), Positives = 119/296 (40%), Gaps = 9/296 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPT 60 + P LQ +AV R F RAA++L +TQSA+S+++ QLE L R + T Sbjct: 6 RLPSMTALQCFEAVARHLSFTRAAEELSLTQSAMSKQVAQLEEQLQHALFRRVRKRLQLT 65 Query: 61 EQGQKLLALLRQVE-LLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP- 118 G+ LA +R++ +E G +L +A A WL+P L P Sbjct: 66 PAGELYLAEVRRILQQVELSTRFLLSYGGETEVLRVATPPTFGARWLIPQLNGWRHRHPN 125 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 I L+L+ E E + LR+G A LP +L + + V + Sbjct: 126 IHLDLRQELEP---DDLRQGHCDLAFFFGPGTLPGAECIRLFGEELVAVCAPALLPAGGL 182 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 + T+ A L + + H F + G ++ ++ A+ G Sbjct: 183 DEPTQLAGLVL-LQNASRAEAWHDWFASLGRNCQ-GCYHGPRFDTFYMCIRAAQAGCGVA 240 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 ++P +E+ELA G+L P + Y+ + + + KV +++ + L Sbjct: 241 LLPRFLVEEELAEGKLAIAWPHALPSQEAYYLAYPEHAAEVPKV-RHFVEWMRERL 295 >UniRef50_A6WYX4 Transcriptional regulator, LysR family n=38 Tax=Rhizobiales RepID=A6WYX4_OCHA4 Length = 310 Score = 189 bits (481), Expect = 9e-47, Method: Composition-based stats. Identities = 62/290 (21%), Positives = 110/290 (37%), Gaps = 7/290 (2%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQ 62 PD TLQA + R F +AA +L +TQSAVS++IK LE+ G L R ++ Sbjct: 9 PDIATLQAFECAARHGSFTQAAHELNLTQSAVSRQIKDLESQLGVLLFERIRQRILLSDA 68 Query: 63 GQKLLALLRQVE-LLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G+K L +R++ E+ L + + S+A WL+P ++ + P + Sbjct: 69 GRKFLPEVRRLLNQTEDTMLRAMASAQSTSSFSVATLPTFGTRWLMPRISDFIEKHP-GI 127 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 + V + + A+ L + + V+S + P+ Sbjct: 128 AINVASRSGVFD-FEEQPFDLAIHYGQPVWAHATCTFLCSEVIVPVASPALLKARHPS-- 184 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 L P++ M + + + H + + A G ++P Sbjct: 185 APEELENEPLLHLATRPKMWAQWFESCGVEGRSAYRGHRFDQFSMVIGAALAGLGFALLP 244 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGH 291 IE+EL SGEL+ L + Y+ PE ++ +T + Sbjct: 245 LYLIEQELLSGELVMLFEKPMRTENEYY-LVVPEGKLENPLTQVFCQWIA 293 >UniRef50_A6VVZ6 Transcriptional regulator, LysR family n=3 Tax=Gammaproteobacteria RepID=A6VVZ6_MARMS Length = 311 Score = 189 bits (480), Expect = 9e-47, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 104/293 (35%), Gaps = 7/293 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 + P +L+ ++ R F +AA++L +T SA+S +IK LE+ G L RT T Sbjct: 16 RLPPLNSLKCFESAARHGSFNKAAKELSVTPSAISHQIKGLESFLGLELFRRTKRKVILT 75 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 E G+ L ++ + E + ++ L LAV L WL+P + P Sbjct: 76 EAGESYLKPIKSIFEQLESATSELKSKQKSGSLRLAVAPAFLTRWLMPRMERFQERYP-D 134 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + +++ T + ++ AV L V + + P Sbjct: 135 IQIEISSSTGLID-FSANDIDMAVYFGSGDWDDVEAYYLRPARLAPVCNPRLIKPEQP-I 192 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 V + P++ D +LQQ+ P + +S A QG + Sbjct: 193 VKPEDMRFYPLLHVTKRKDEWHDWLQQHDLDPKLFRRGLMFSSGSLTAGAAAQGLGISLT 252 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRF---APESRMMRKVTDALLDYG 290 I E+ +G L L ++ + + M + +++ Sbjct: 253 DPELIMPEIEAGTLKVLFDQHLITNRSFYLVYEKRRSVTSAMSAFKEWIIEEM 305 >UniRef50_Q7MF54 Transcriptional regulator n=20 Tax=Proteobacteria RepID=Q7MF54_VIBVY Length = 307 Score = 189 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 67/297 (22%), Positives = 121/297 (40%), Gaps = 10/297 (3%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQGQ 64 + L +V+ F AA++L +T+SAVS+RI LE+ G LL RT TE G+ Sbjct: 5 FSDLPIFVSVVECGSFSSAAKQLHLTKSAVSKRINHLEDKLGSRLLNRTTRKLSLTEAGE 64 Query: 65 KLLALLRQVELLEEEWLGD--EQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IRL 121 + Q L + + E G L + + P ++ L+ P + + Sbjct: 65 RYYEYAAQALNLARQGVDAVTELQGEPRGRLKITAPMTFGVLHVAPLISEFLSRYPKVEV 124 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +LQ+ED+ L G + I H + + +L + +S + + + Sbjct: 125 DLQLEDQ---MVDLVAGRFDLGIRIGHLPDSNLIAKRLAPCRTVLCASPDYVSR-MGSPS 180 Query: 182 TRSALLKAPVVAFDHLDDMHQA-FLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + L + + + + ++ FL Q + IVN+SEA + G + Sbjct: 181 KPADLAQHNCLRYSYFRGGNEWLFLNQGNEYKVLPKGNFIVNNSEAIRRALLAGIGIAQM 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 P I KEL +L++L P +Q + + PE + M +D+ ++ L D Sbjct: 241 PTFIIGKELRDRKLVNLMPE-YQLPQHFLYAVFPERKHMPLKVRMFIDFLNEKLGSD 296 >UniRef50_Q15X65 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15X65_PSEA6 Length = 297 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 68/292 (23%), Positives = 122/292 (41%), Gaps = 11/292 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPT 60 K P L+ A F+ AA+++ +TQ+A+SQ IK LE FG L VR T Sbjct: 3 KLPPLNALRYFLAAAETLSFKAAAEQMFVTQAAISQHIKTLEVFFGCQLFVRGHRHVSLT 62 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 + G++LL + ++ +G+ P +L+L V + WL+P L + P Sbjct: 63 KAGERLLPDIATGFSFLDKGVGNLVMDPRPNILNLTVIESLSSRWLVPRLYLFQQEYP-H 121 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 +N++++ R + E+ A+ P KL V A+ Sbjct: 122 INVRIQPTNRLLN-FDQNELDLAIRFGIGDYPQLKSRKLAQDTIHLVCHPGLAK----QI 176 Query: 181 VTRSALLKAPVVAFDHLDDM--HQAFLQQNFDLP-PGSVPCHIVNSSEAFVQLARQGTTC 237 T ++ + P + D + ++F Q + P G H+ +SS ++ A G Sbjct: 177 DTAQSVSRHPTLTEKSSDILPAWKSFYQLHRINPDVGRNALHVDDSSVTIIEAALAGQGI 236 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDY 289 M+ + I ++L G+L+ L F+ Y+ APE+ R+ ++ Sbjct: 237 AMVRNSLIFEQLEKGQLVKLFNFSFKCHYAYY-LVAPEAHFKREKIQCFSNW 287 >UniRef50_B9JKI0 Transcriptional regulator protein (Activator) n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JKI0_AGRRK Length = 334 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 97/259 (37%), Gaps = 7/259 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPPRPT 60 + P + +A R F AA +LC+TQSAVSQ+I+Q+E++ L R T Sbjct: 42 RLPPLNLFRVFEAAARHGSFTAAADELCVTQSAVSQQIRQIEDLLDVRLFRRLPRRVELT 101 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-I 119 +G +L + + + L P +L + + WL+P L + +P I Sbjct: 102 REGTQLASAVHESLALLARACERIVDPMAPTVLCINAPPAIASRWLVPRLKRFMQLNPQI 161 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 ++ L ++T R ++ A+ V++LG V S + P Sbjct: 162 KVTLLASNDTVN---FDRQDIDVAIRWGRGDWQGARVERLGPDKLFPVCSPSVL-REGPP 217 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 V+ L ++ + F N + + A QG + Sbjct: 218 IVSPGDLAHHTLLQNMNSSLWATWFATAGVG-SVNFDETLYFNDAGLLLDAAVQGQGIAL 276 Query: 240 IPHLQIEKELASGELIDLT 258 H+ +E +L +G LI Sbjct: 277 ANHMLVENDLKTGRLIRPF 295 >UniRef50_A3Y562 Transcriptional regulator, LysR family protein n=2 Tax=Proteobacteria RepID=A3Y562_9GAMM Length = 296 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 69/301 (22%), Positives = 118/301 (39%), Gaps = 14/301 (4%) Query: 1 MKR-PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPR 58 MKR P + +QA +A R + ++AA +LC+T A+SQ+IK LE L R R Sbjct: 1 MKRLPPLKAMQAFEAAGRHQSLKKAADELCVTTGAISQQIKLLEAHLEVELFKRLNKSVR 60 Query: 59 PTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 TE G+ L L+ Q L + QT S L++++V A WLLP L P Sbjct: 61 LTEAGRACLPLIEQGFELLGDAAAKAQTYSEQKLITISVAPSFGAKWLLPRLEQFRRKHP 120 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 ++L+++ TR + +V ++ V+ L + V S Sbjct: 121 -DIDLRIDASTRLID-FAHDDVDISIRYGAIKEKGMHVEALSHEELFPVCSP----HLMT 174 Query: 179 NGVTRSALLKAPVVAFDHLD-----DMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQ 233 + AL P++ + ++++N + S +Q A Sbjct: 175 QCASLEALSDYPLLHLERRSADKSFPGWAEWIEENGLNKEAFKHGPRFSMSSMVLQAAID 234 Query: 234 GTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 G M + +L +G LI L P R ++H ++ R +D+ + Sbjct: 235 GQGVAMASSVLAADDLKTGRLIRLFP-QSLRAKYHYHLICTKNLSQRADVVKFIDWIKQE 293 Query: 294 L 294 + Sbjct: 294 I 294 >UniRef50_B5XS26 Transcriptional regulator, LysR family n=6 Tax=Proteobacteria RepID=B5XS26_KLEP3 Length = 301 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 66/290 (22%), Positives = 111/290 (38%), Gaps = 6/290 (2%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RP 59 MK P L+ +A R ++AA +LC+T SAVSQ+I +LE PL +RT + Sbjct: 3 MKLPPLNALRCFEAAARLLSLKQAASELCVTASAVSQQIARLEEALNTPLFIRTPRQLQL 62 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 TE G+ L ++ L Q + P ++L+ + WLLP LA P Sbjct: 63 TEVGEIYLRAVQPAFLQIAAATQRLQVPAGPEKVTLSCTSGFAIQWLLPRLADFERRYP- 121 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 ++ +Q+ R + L G + AV P +L D + V S Sbjct: 122 KIEIQIGTTNRRVDLLSEG-IDFAVRHGVGGWPELQAYRLLDDDLIPVCSPQLIAPRRSL 180 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 LL+ P++ +H +D + + P + + S + A G + Sbjct: 181 AG-AGDLLQYPLLHDEHREDW-ALWCEAVGLEPDRARRGPVFTDSNGVTEAAFAGMGMAL 238 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDY 289 + I L G L++ L +H E+ ++ D+ Sbjct: 239 LRRSFIASALTQGRLVNPL-AQPIACPLAYHLVYHETALLAPANRCFRDW 287 >UniRef50_Q0HUM5 Transcriptional regulator, LysR family n=20 Tax=Gammaproteobacteria RepID=Q0HUM5_SHESR Length = 293 Score = 186 bits (472), Expect = 8e-46, Method: Composition-based stats. Identities = 69/287 (24%), Positives = 115/287 (40%), Gaps = 10/287 (3%) Query: 12 LDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQGQKLLALL 70 AV F AAQ+L ++ + VS++I LEN G L RT TE+G Sbjct: 10 FVAVAEAENFTLAAQRLNVSTAHVSRQIGALENRLGTKLFYRTTRKVSLTEEGTIYYRHC 69 Query: 71 RQVE--LLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVEDE 128 RQ++ L E E + GS L+ L +++P L + P + V+ Sbjct: 70 RQLQTGLEEAERAITDLKGSPQGLVKLTAPVAYGEKFIMPLLNDFMVQYP-SVEFNVDLT 128 Query: 129 TRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSALLK 188 RT + L G A+ + A S + L + + +S + EKY T S L + Sbjct: 129 NRTLD-LIEGGYDLAIRLGKLADSSLMAKPLSSRTHYMAASPSYVEKY-GQPHTLSELNQ 186 Query: 189 APVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIEKE 248 + +H + F++ + I NS A A +G +P IE++ Sbjct: 187 HNCLIGNHN---YWRFIENGRERNIKVRGNLICNSGYALRDAALKGIGIVQLPDYYIEED 243 Query: 249 LASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 + +G LI + + W + P++R + L+DY + L Sbjct: 244 IHAGRLISFLDAHREAKEGIWALY-PQNRHLSAKVRVLVDYLAEKLA 289 >UniRef50_Q210B4 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=Q210B4_RHOPB Length = 314 Score = 186 bits (472), Expect = 8e-46, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 104/291 (35%), Gaps = 7/291 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPT 60 + P L+A +A R F AA +L +TQ+A+S +I++LE G L VR T Sbjct: 4 RLPSLNGLRAFEAAARHLSFTSAAAELNVTQTAISHQIRRLEEELGIQLFVRQNRTLALT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 Q + L +R +L+++ A A WLLP L+ P Sbjct: 64 PQARDYLPGVRAAFNDLRLATDRLLRKDAACVLTISTLASLAAKWLLPRLSAFQEAHPA- 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 +++++ T + R+G+V A+ P D L A V S + P Sbjct: 123 IDVRITTSTALVD-FRKGDVDAAIRYGRGQWPGLRADWLMADQLFPVCSPALLQGKKPLR 181 Query: 181 VTRSALLKAPVVAFD--HLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 + L + ++ + DD P + VQ A G Sbjct: 182 -SPQDLAEHSLLYSSGGYDDDWRLWLTAAGLPADISKQPGLSFDLIFMTVQAAIDGLGVA 240 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDY 289 + +E ++A G L+ ++ +PE+R A + Sbjct: 241 IGRTSYVEADIAKGRLVVPFQIKLPDEWGFY-LVSPEARAETPKLSAFRQW 290 >UniRef50_A7HSK5 Transcriptional regulator, LysR family n=2 Tax=Bacteria RepID=A7HSK5_PARL1 Length = 317 Score = 186 bits (472), Expect = 9e-46, Method: Composition-based stats. Identities = 61/292 (20%), Positives = 106/292 (36%), Gaps = 6/292 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 + P + L+A +A R F RAA +L +T +AVS +I+ LE G L RT T Sbjct: 5 RLPSLKALRAFEAAARHGSFSRAAAELSVTHAAVSHQIRALEEELGAGLFHRTGRAVELT 64 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 E+G++L +L E L+++V A WL+ L +P Sbjct: 65 ERGERLYPVLAAAFDQIAEGWSQAG-AKDTAALTVSVEPSFAARWLVLRLGKFNRANP-E 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + L++ + + R +V V P + +KL V S + P Sbjct: 123 IELRLLPSSELVD-FSREDVDIGVRYGLGGWPDVVSEKLFEATVYPVCSPALLDPKKP-I 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 L P++ + ++ Q P ++ + + +Q A G + Sbjct: 181 RKPEDLKSYPLLHEETMEHWQQWLEAAGVKHPRWALRGPLFIEASLALQAAAGGQGVALA 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHK 292 +LA G LI L YW P+ + + A ++ + Sbjct: 241 NDTLAMADLAEGRLIRLFDIEMPDEEGYW-LVYPKDGLKKPKVQAFRNWIRE 291 >UniRef50_B9Z4C8 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z4C8_9NEIS Length = 318 Score = 186 bits (472), Expect = 9e-46, Method: Composition-based stats. Identities = 70/305 (22%), Positives = 121/305 (39%), Gaps = 17/305 (5%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PP 57 M+R P LQ +A +R F RAA++L +TQSAVS++I+ LE+ G+PL R Sbjct: 1 MRRTLPSLMALQCFEAAVRHLSFTRAAEELNLTQSAVSRQIRALEDFIGRPLFERVKQRL 60 Query: 58 RPTEQGQKLLALLRQVE-LLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLAD 116 T G+ A ++ V E L +L++A+ + WL+P L A Sbjct: 61 VLTVAGEAYAAAVQDVLDRAEAATLQLMAYSGEGGMLTIAMLPTFGSRWLVPRLGDFAAR 120 Query: 117 SP-IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEK 175 P I+LNL + +++ E A+ P + +L D + V + Sbjct: 121 YPDIQLNLVTQVRPFDFDKV---EADVAIHFGPALWPGAICHRLMGEDIVPVCAPALLGG 177 Query: 176 YFPNGVTRSALLKAPVVAFDHL-----DDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQL 230 P+ +L ++ D +H A ++ G + +Q Sbjct: 178 R-PHLDDVREILAYTLLQHTTRPQAWNDWLHAAGIEGLTGNEAGLLSGPRFEHFFMVIQA 236 Query: 231 ARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMM---RKVTDALL 287 A G ++PH +E+EL SG L+ + + Y+ + R + LL Sbjct: 237 AVAGLGIAVLPHFLVEEELQSGRLVLALDKPVRSQHAYYLVHPATKADLYKVRVFREWLL 296 Query: 288 DYGHK 292 + + Sbjct: 297 EQAGR 301 >UniRef50_Q0KCL9 Transcriptional regulator, LysR-family n=2 Tax=Cupriavidus RepID=Q0KCL9_RALEH Length = 302 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 67/291 (23%), Positives = 114/291 (39%), Gaps = 15/291 (5%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPP 57 M+R P LQA +A R F AA++L +TQ AVS++++ LE G L R Sbjct: 1 MRRLCPSLTELQAFEAAARHNSFTVAARELHVTQGAVSKQVRSLEAYLGVELFQRVRQRL 60 Query: 58 RPTEQGQKLLAL----LRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPV 113 T G++ L L ++E E + + G +L +A A WL+P L Sbjct: 61 MLTTAGERYLERIGPSLNELEAATVELMARQGRG---GVLHIASMPTLGAKWLIPRLPQF 117 Query: 114 LADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFA 173 A P + L+ + + ++ A+ P L D + + L V Sbjct: 118 FARHP-EVKLEFVPHAQGYD-FSEPDLDAAIRFGDGVWPGSLADYMTGREVLPVCRPGLL 175 Query: 174 EKYFPNGV--TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLA 231 P GV T +ALL+ P++ + + + + + Q A Sbjct: 176 ASE-PGGVAPTPAALLRYPLLHHTTVPEAWPDWFATLGVPTREAWSGARFDQFSLLTQAA 234 Query: 232 RQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKV 282 G +IP IE+ELA+G L+ P + Y+ + + + + + Sbjct: 235 LSGLGIALIPRCLIEEELATGALVVAHPAQVLAKKGYYLCYPEQKQHLPAL 285 >UniRef50_A0K446 Transcriptional regulator, LysR family n=12 Tax=Burkholderia cepacia complex RepID=A0K446_BURCH Length = 305 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 64/295 (21%), Positives = 108/295 (36%), Gaps = 8/295 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPT 60 + P L+A +A R + AA++L +T AVSQ I+ LE G L R T Sbjct: 5 RLPPLNALRAFEAAARHLSVKSAAEELSVTPGAVSQMIRTLETHLGVQLFERVNRGILLT 64 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G+ L +R + + +L+++V + WL+P LA P Sbjct: 65 AAGRDYLPPVRNAFRQIADASQRVSGAADSGVLTVSVTPFFASAWLVPRLAQFRQACP-D 123 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 ++LQV + R G V A+ ++L ++ + ++S + Sbjct: 124 VDLQVLTSHALADFARDG-VDVAIRHGLGRYIGLCSERLLTVEIVALASPGLVAR-LGMP 181 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 T + L+ P + H F Q D G + S +Q G ++ Sbjct: 182 ATPAELVGWPQLHDAERKGWHIWFGAQRID-DFGPPRGPAFDDSGLLLQAIVAGQGAGLL 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAP---ESRMMRKVTDALLDYGHK 292 P + ELASG L+ L + Y+ + P E + +LD Sbjct: 241 PAAMVRGELASGRLVQLADVAWLDDFAYYLVYPPHHAERPKVAAFRRWILDAAQA 295 >UniRef50_A4JTI2 Transcriptional regulator, LysR family n=15 Tax=Proteobacteria RepID=A4JTI2_BURVG Length = 318 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 114/293 (38%), Gaps = 12/293 (4%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR----PTE 61 L+A +A R + F AA +L +T +AV Q ++ LE G PL R+ R PTE Sbjct: 7 LNALRAFEASARHQSFSAAAVELHVTPAAVGQLVRTLEEWLGAPLFHRSASGRVRLVPTE 66 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 ++ L +R + GS +L++AV+ A WLLP + P Sbjct: 67 AAERALPDIRAGFDRLAIGFERLKEGSINGVLTVAVSPAFAAKWLLPRIERFQTAWP-DT 125 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +++++ + + + +G + V P KL + V + + P Sbjct: 126 DVRLDTNLKPVDFVAQG-IDIGVRYGTGNWPGLASQKLMDEEVYPVCTPKL-RREHPGLR 183 Query: 182 TRSALLKAPVVAFDHLD-----DMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 + L + ++ +D +L++ + +N+S A +Q A +G Sbjct: 184 NPADLRRVTLIHDLSMDSHTGFPTWDTWLRKVGFTDVSTKRGLKINNSAAVLQAAIEGHG 243 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDY 289 + + +LA+G L+ L P + L ++ + A D+ Sbjct: 244 VALARSVMAHDDLAAGRLVRLFPDVAFTSPLAYYVVVRDECACLPKLTAFRDW 296 >UniRef50_A4F096 Transcriptional regulator, LysR family protein n=3 Tax=Rhodobacterales RepID=A4F096_9RHOB Length = 302 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 94/260 (36%), Gaps = 8/260 (3%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRP 59 M+ P L+ +A R + F A ++L +TQSAVS++IK+LE G L R Sbjct: 1 MRLPSLTHLRCFEAAARHQSFTSAGEELGLTQSAVSKKIKELETDLGFDLFQRVGRGVVL 60 Query: 60 TEQGQKLLA-LLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 T GQ L A L + + L G+ L +AV WL+P L P Sbjct: 61 TSAGQGLAADLAQNLGALRNSLQKAVAAGAGKSALRIAVLPTFANRWLIPRLPDFFDQHP 120 Query: 119 -IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 I LNL E R A+ P + L + +++ F E++ Sbjct: 121 EIELNLLTRLEPF---DFTRDPFDLAIHYGFDNWPGAQMSPLFGEQMVPIAAPAFLERH- 176 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 L P++ D D + + + + G Sbjct: 177 -GLTDPGGLPHVPLLHLDSRSDAWGDWFKSAGISRQMRQDGRYFDQYSMVIAATIAGLGA 235 Query: 238 CMIPHLQIEKELASGELIDL 257 ++P + +EL +G L+ + Sbjct: 236 AIVPIDMVAQELEAGILVQM 255 >UniRef50_A1UWF0 Transcriptional regulator, LysR family n=50 Tax=Burkholderia RepID=A1UWF0_BURMS Length = 343 Score = 184 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 69/299 (23%), Positives = 104/299 (34%), Gaps = 14/299 (4%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 + P +TL A +A R F AA++L TQ AVSQR+ QLE G PL R T Sbjct: 50 RLPPMQTLSAFEAAARLASFTAAARELGSTQPAVSQRVVQLEEDLGTPLFERGRRGVTLT 109 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 E G +L A +RQ D ++ +L + WL+P L + P Sbjct: 110 EDGTRLFAAVRQSLDALRAATADIRSRRANGTFTLVTDFGFATYWLMPRLDDLKRAMP-- 167 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + V T +R A+ P C +L V S F + Sbjct: 168 -GVDVRVVTSQDIDPQREHADVAILFGAGDWPGCTSTRLFQEHVTPVCSPAF-RTAHADI 225 Query: 181 VTRSALLKAPVVAF-----DHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGT 235 + LL+AP++ + F PP NS +Q A Sbjct: 226 ARPADLLRAPLLHVQPTRPERWLAWRDWFDAHGLAAPPE-PHGLTFNSYSLVIQAALMNQ 284 Query: 236 TCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHR---FAPESRMMRKVTDALLDYGH 291 + ++ +A+G+L+ L Y+ PE+R + LL Sbjct: 285 GVALGWAPLVDTPIAAGQLVRLVDAPVVTPRGYYLVLPPARPEARAVPLFRRWLLGACA 343 >UniRef50_A3VZZ4 Transcriptional regulator, LysR family protein n=4 Tax=Alphaproteobacteria RepID=A3VZZ4_9RHOB Length = 306 Score = 183 bits (465), Expect = 6e-45, Method: Composition-based stats. Identities = 70/299 (23%), Positives = 116/299 (38%), Gaps = 15/299 (5%) Query: 1 MKRPD--YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP- 57 M RPD L+ + +R+ F RAA +L +TQ+AVS +I +LE+ G L +RT Sbjct: 3 MDRPDIPLNGLRTFEVALRQGSFTRAAIELRVTQAAVSHQIARLEDRLGAKLFLRTSGGL 62 Query: 58 RPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 PT++G+ L +L L L + V WLLP L+ Sbjct: 63 VPTDEGRDLYPVLEHGLDAIARALDRITGHRHIETLKVGVVTTFAVGWLLPRLSEFRRSH 122 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY- 176 P ++L++ E LR G + A+ + + + + AE Sbjct: 123 P-TIDLRISTNNNRVEILREG-LDMAIRYGAGTWTGHNAELVLEAPLTPLCAPSVAETLS 180 Query: 177 FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 P+ ++R LL++ D+ + F P + P I +SS A +A G Sbjct: 181 HPDCLSRQVLLRSY-----RSDEWSRWFAAAGASCPALTGP--IFDSSIALADVASAGAG 233 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQ--RRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 ++P + LA G+L+ R L W P + M T + ++ Sbjct: 234 VALLPVEMFARRLAEGQLVQPFATTVSAGRYFLTWPAERPSTPAMMDFTRWITRASAEL 292 >UniRef50_D0IY54 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0IY54_COMTE Length = 314 Score = 183 bits (464), Expect = 7e-45, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 113/294 (38%), Gaps = 5/294 (1%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRPTEQG 63 + L+ V + + + AAQ L +T AVSQ+I+ LE+ G LL R R TE G Sbjct: 24 PLQALRTFVEVGQRKSVKAAAQALHVTPGAVSQQIRVLEDRLGVVLLERERLGMRLTEAG 83 Query: 64 QKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNL 123 + LR+ L ++ + + L+++ A A+WL+P L P + + Sbjct: 84 ASVHPRLREAFLQIDQAMHALERSKGRRSLTVSTVATFAASWLVPRLGRFKQLHP-DIEI 142 Query: 124 QVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTR 183 +VE + + L+R V A+ P V L A V+S F + + Sbjct: 143 RVEATSELVD-LQRDRVDIALRHGLGDYPGLEVTCLMAPVLTPVASPEFLKTCRGAVINE 201 Query: 184 S-ALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 + L P++ D + ++ A G ++P Sbjct: 202 AGDCLDYPLLHDGDRADWPLWLKAHGVADDARAQRGSAFEDDFLLIRAAEAGQGLALVPQ 261 Query: 243 LQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 ++E+A+G L+ + + R Y+ P + +V A LD+ Q Sbjct: 262 AYAQEEIATGRLVQVLDKPWPARFAYYAVTRPGAADRSEV-RAFLDWIRAEAAQ 314 >UniRef50_A8HSF9 Transcriptional regulator n=8 Tax=Proteobacteria RepID=A8HSF9_AZOC5 Length = 357 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 61/290 (21%), Positives = 101/290 (34%), Gaps = 9/290 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTE 61 P TL A +A R + F RAA +L +TQ AVS++I+ LE G L R T+ Sbjct: 60 LPSISTLTAFEAAARHQSFSRAAAELHLTQGAVSRQIRHLEEQIGLDLFERVRQRVVLTD 119 Query: 62 QGQKLLALLRQVELLEEEWLGDEQT-GSTPLLLSLAVNADSLATWLLPALAPVLADSP-I 119 G+ LA +R + + T + LAV WL+P L LA P I Sbjct: 120 GGRLYLAEIRPLLQALSDATQRAMTYAGGAGSIQLAVLPTFATRWLMPRLPDFLARFPDI 179 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 +N + A+ P + + L + + V S F +++ + Sbjct: 180 TINFISRIAPF---DFAAEPLDAAIHYGDPVWPGAICEHLMDEEVVPVCSPAFRDRHALD 236 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 L ++ + +L P + A G + Sbjct: 237 --RPERLAGVVLLQQTTRPHLWDEWLALAGASHPSPFRGPRFEQFTMIAEAAAAGLGVGL 294 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDY 289 +P +E+E+A G L+ Y+ PE++ A + Sbjct: 295 VPRFFVEEEVAQGRLVLPFDRPMCSDKAYY-VVYPEAKAGGGAVTAFARW 343 >UniRef50_A9IQK9 Transcriptional regulator, LysR-family n=6 Tax=Burkholderiales RepID=A9IQK9_BORPD Length = 306 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 75/301 (24%), Positives = 117/301 (38%), Gaps = 18/301 (5%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPP 57 M+R P LQA + R F RAAQ+LC+TQ AVS+++K LE+ G L +R Sbjct: 1 MRRFCPSLTDLQAFEVAARHSSFTRAAQELCVTQGAVSKQVKHLESFLGVELFLRIRQGL 60 Query: 58 RPTEQGQKLLALLR----QVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPV 113 TE GQ L ++ Q+E E + + G L L A WL+P LA Sbjct: 61 VLTEAGQSYLKKIQAGLGQIEAATVELIAHQGQG---GTLHLTCMPTFGARWLIPRLATF 117 Query: 114 LADSPIRLNLQVE-DETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPF 172 + +R ++ VE R E+ AV P D + D + V S Sbjct: 118 MR---VRPDIHVEFLPHRQGYDFSTPELDAAVRFGDGIWPGSGADYIVGRDIVPVCSPRL 174 Query: 173 AEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLAR 232 + LL+ P++ + + + +Q ++ + Q A Sbjct: 175 LG---DGCQSADELLRYPLLHHTSALEGWRDWFEQAGCDTRRALEGARFDQYSLLSQAAA 231 Query: 233 QGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHK 292 G +IP IE EL G+L + R Y+ + PE + + A + + Sbjct: 232 AGFGIALIPRCLIEDELRDGKLAVALRLPIRARQGYYLCY-PEQKANLPILQAFRAWLME 290 Query: 293 V 293 V Sbjct: 291 V 291 >UniRef50_C5CR23 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CR23_VARPS Length = 314 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 107/292 (36%), Gaps = 8/292 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P L+A +A R + AA +LC+T AVSQ IK LE G L R T+ Sbjct: 5 LPPLNALRAFEATARHLSVKNAADELCVTAGAVSQLIKSLELHLGIALFRRANRGIFLTD 64 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 GQ L +R + + +L+++ + WL+P L P + Sbjct: 65 AGQAYLPPVRNAFRQISDATRRIAMPAETGILTVSTTPFFASAWLVPRLKSFHDAHP-DI 123 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +LQV T + R G V A+ P + ++ ++ + V++ + Sbjct: 124 DLQVVSSTALADFSRDG-VDVAIRHGLGRYPGLISQRVLTVEIVPVATPALV-RQLGMPA 181 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNF-DLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + + L + P V F Q D P P + S ++ G ++ Sbjct: 182 SPADLTRWPRVNDAERKGWAMWFEAQGIEDARPARGPS--FDDSGLLLKAVLAGQGAGLL 239 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHK 292 P + E+A G L+ L+ + Y+ PE R A ++ Sbjct: 240 PAALVADEVAEGRLVQLSEAAWLEDFAYY-LVHPEDSRHRPKVAAFREWIAA 290 >UniRef50_Q485T8 Substrate-binding transcriptional regulator, LysR family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q485T8_COLP3 Length = 308 Score = 180 bits (458), Expect = 3e-44, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 118/298 (39%), Gaps = 11/298 (3%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQ 62 P + VI + F +AA+KL +T SAVS++I +LE+ G LL RT TE Sbjct: 8 PLLSDMAIFVTVIEQGNFSKAAKKLGVTPSAVSRQISRLEDALGIKLLQRTTRQLALTES 67 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTP--LLLSLAVNADSLATWLLPALAPVLADSPIR 120 G+ +Q+ ++ + ++ ++ LL ++ L P L P Sbjct: 68 GKLTFDYCKQMVESADQAVNASRSATSTVSGLLRVSAPKSLANKVLRPLFVEFLKCYP-D 126 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + L ++ R + + G V + I + + + K+G ++ + +S F + + P Sbjct: 127 IQLHLKVTDRILDPIHDG-VDFLIHINDYPIEALVNIKIGRVEQVLCASPEFLQSHTPPT 185 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + + +++ D F+ +N +++N S+ QG + Sbjct: 186 HPDDLKYLSCICLGENMVDNRWRFINENQQTTVQVAGSYLLNHSDMRRDAIEQGFGIGPL 245 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWH----RFAPESRMMRKVTDALLDYGHKVL 294 P ++ + +G+LI L G + +S+ + +D+ + L Sbjct: 246 PDYIAQQGIKTGKLIPLLEGWQLTGS--YQGDICLQYVQSKYLPNKNRVFIDFMKQKL 301 >UniRef50_Q0HTP8 Transcriptional regulator, LysR family n=19 Tax=Alteromonadales RepID=Q0HTP8_SHESR Length = 320 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 57/296 (19%), Positives = 108/296 (36%), Gaps = 10/296 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPT 60 P L+A ++ R + A+++L +T A+S++I+ LE G L VR T Sbjct: 22 SLPPLNALRAFESAARLQSMTLASKELHVTHGAISKQIRVLEEFLGFALFVRLHKKVALT 81 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQT-GSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 ++ ++ L ++ D ++ GS P L++ V WL+P + + P Sbjct: 82 DEAKRYLPHVQAALQTLSSATADLRSQGSRPQTLAINVLPSLTINWLIPRMEQFKSRHP- 140 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 L + + + +G A+ Q KL D V + A P Sbjct: 141 HLYVDLSIGDFAVD-FSQGRYDIAIRSSTQLPRGVNYIKLMDEDLCLVCAPSLA----PK 195 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 + + + ++ ++ + + L V Q A G + Sbjct: 196 LKSIEDINQVTLLKHTTRPELWE-YWADKVGLVLTQAQTFGVEHFYMLSQAAASGMGAAL 254 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 IP IE +LA+G L+ F Y+ P+S + A +D+ ++ Sbjct: 255 IPRFFIEDQLANGNLVIPFQAPFTSPYAYY-LLTPKSPSLPLKVQAFIDWMLELFA 309 >UniRef50_Q2RS80 Transcriptional regulator, LysR family n=3 Tax=Alphaproteobacteria RepID=Q2RS80_RHORT Length = 317 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 60/290 (20%), Positives = 98/290 (33%), Gaps = 7/290 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPT 60 + P L+A +A R GF AA++L +T +AVS ++K LE+ G L R T Sbjct: 4 RLPPLNALRAFEAAARHGGFTGAARELHVTPAAVSHQVKGLEDALGVSLFHRLAKGLELT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G+ L L + G+ L+++V A WL P LA L P Sbjct: 64 AAGRAYLPELTAGFDQLARASERLKRGALVGRLTVSVLPSFAAGWLAPRLASFLRRYP-D 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP-- 178 + L + RT + +R V + P ++ + + + P Sbjct: 123 ILLDLRSTPRTVDFIRE-RVDLGIRYGGGIYPGLASYRILEEEVFPICAPALLNGPVPLR 181 Query: 179 --NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 + LL P + + +L + H S A + G Sbjct: 182 GFADLRHHVLLHDPGILPGEPWTGWEPWLAEAGVTDIDLEAGHGFTESIAMIHACVAGLG 241 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDAL 286 + + + L SG L+ P YW P S+ K + Sbjct: 242 VGIGRSGLVTELLRSGRLVRPFPVSRPADFSYWVVVPPPSQTNPKAAAFI 291 >UniRef50_A6UEA0 Transcriptional regulator, LysR family n=7 Tax=Alphaproteobacteria RepID=A6UEA0_SINMW Length = 297 Score = 180 bits (456), Expect = 7e-44, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 110/291 (37%), Gaps = 7/291 (2%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQ 62 PD TLQA + R F +AA +L +TQSAVS++IK LE+ G L R ++ Sbjct: 9 PDVTTLQAFECAARHGSFTQAAAELNLTQSAVSRQIKDLESQLGVLLFERVRQRVILSDA 68 Query: 63 GQKLLALLRQVELLEEEWLGDEQ-TGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 GQK L +R++ EE + + LS+A + WL+ L L P + Sbjct: 69 GQKFLPEVRRLLNQTEELMVRAMASARADSSLSIASLPTFGSRWLVQRLPDFLKRHPGTV 128 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 A+ + L + + +S + Sbjct: 129 VNIASRSEPFD--FEEQNFDLAIHYGQPVWARAICSYLCSEVIVPAASPALLAVH--PVA 184 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 + + + +P++ + + + N G+ + + ++ A G ++P Sbjct: 185 SPADIGGSPLLHLATRPKLWAQWFETNDVEQDGAYRGNRFDQFSMVIEAATAGLGFALLP 244 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHK 292 IE+EL +G L + Q Y+ PE ++ ++ A ++ + Sbjct: 245 RYLIEQELTAGTLRIVLDRPMQTENSYY-LAIPEGKLENPISRAFREWITE 294 >UniRef50_Q2W945 Transcriptional regulator n=2 Tax=Magnetospirillum RepID=Q2W945_MAGSA Length = 296 Score = 179 bits (455), Expect = 8e-44, Method: Composition-based stats. Identities = 66/294 (22%), Positives = 111/294 (37%), Gaps = 5/294 (1%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTE 61 + P R L A +A R F RAA++L +T +A+SQ+IKQLE++ G L R T Sbjct: 4 RLPPLRALHAFEAAARHLSFARAAEELGVTPAAISQQIKQLEDILGVGLFHRGTRLSLTR 63 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 + + +G L ++ A WL+P L P + Sbjct: 64 AAALVSGEVSDAFDRLASAVGRLAPDGPARPLVVSAPPAFAARWLVPRLTRFQDAHP-GI 122 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP-NG 180 +L + R + R G V A+ P LV++L + + V++ A + Sbjct: 123 DLHLSATLRLVDLDREG-VDLAIRYGPGRYPGLLVERLRLEEVVAVATPRLAAGLGEVSD 181 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + R+ LL + +D A+L + P ++ + ++ A G ++ Sbjct: 182 LARATLLVNEGIGWDPSFPTWPAWLSEMGASPAETLRLRPFGDASLVLEAALAGLGVALV 241 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 + ELA G L+ L PG +H R A D+ L Sbjct: 242 WRTLVCDELAGGRLVALFPGRPLASA--YHLACLPERAEFPPIRAFRDWIKAEL 293 >UniRef50_Q39LC6 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q39LC6_BURS3 Length = 341 Score = 179 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 63/291 (21%), Positives = 115/291 (39%), Gaps = 8/291 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P L A +A R F AA++LC+TQSA+S++I+ LE G L VR+ T+ Sbjct: 48 LPPLSYLTAFEAAARHESFTSAAEELCVTQSAISRQIRLLEETLGCALFVRSHKAVSLTD 107 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G+K + L + + ++ ++++ + + WL+P L A+ P + Sbjct: 108 GGRKFQRTVNAALDLLAAAAYELRVQASTSTVTVSADLAIASHWLIPRLPKFRAEHP-EI 166 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 + V+ +R G A+ P+C L + V + + + P Sbjct: 167 IIHVDASDEDTRNIREG-ADLAIQFGDGYWPACNARFLLEEEIFPVCTPAYLARLAPMAH 225 Query: 182 TRSALLKAPVVAFD--HLDDMHQAFLQQNFDLPPGSVPC-HIVNSSEAFVQLARQGTTCC 238 TR LL+A ++ + H D M A + D+ +N+ A +Q A G Sbjct: 226 TRD-LLRATLIHLETRHWDWMDWATWFAHHDIALTEPRQDLYINNYPAVLQAAMGGQGIA 284 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDY 289 M + LA+G L+ + ++ P ++ D+ Sbjct: 285 MGWRYLADDMLATGVLVRPIETSVRTGRGFY-LLHPSDTLLSPEARIFCDW 334 >UniRef50_C3K213 Putative LysR-family regulatory protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K213_PSEFS Length = 315 Score = 179 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 63/301 (20%), Positives = 111/301 (36%), Gaps = 9/301 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPT 60 + P LQA + + F RAA +L +T SA+S +I LE +G L R + + T Sbjct: 4 RPPPTPMLQAFVSAAQTGSFSRAASELNLTASAISHQIAGLEEWWGVQLFERHSRGVKLT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 GQ LL + + L G + L L+ + +TWL+P L ++ Sbjct: 64 AAGQALLPVTDGFFNALDGVLQSLNPGKSQP-LYLSCTSSLCSTWLIPRLHGSHTEASFN 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L+L + RL + AV + + P V+ L V S F Sbjct: 123 LDLVLTSADMNNTRLEAHQYDVAVVMGYGDYPDHHVELLMRDAVFPVCSPEFLR--LKGD 180 Query: 181 VTRSALLKAPVVAF--DHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 ++ + + P++ D + +++ PP S + LA +GT Sbjct: 181 ISLEGVARYPLIHRVDDQVCPGWESWFAFQGLAPPPYHHGPRFPDSSLAISLAVKGTGIA 240 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYW---HRFAPESRMMRKVTDALLDYGHKVLR 295 + + +L G L+ L + Y+ + ++ + L K LR Sbjct: 241 LGRTALVFDQLEDGALVALKSPVMMSPAAYYIICRSGRQSEPDIARLIEWLKTSASKFLR 300 Query: 296 Q 296 + Sbjct: 301 E 301 >UniRef50_Q5DYL0 Transcriptional regulator, LysR family n=2 Tax=Vibrio fischeri RepID=Q5DYL0_VIBF1 Length = 299 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 55/298 (18%), Positives = 108/298 (36%), Gaps = 8/298 (2%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV----P 56 MK L+A +A R F AA++L +T +A+ Q++K LE G L R Sbjct: 1 MKLHHLNGLRAFEASARHLSFSLAAKELNVTPAAIGQQVKLLEEWLGISLFERRTSGVSR 60 Query: 57 PRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLAD 116 T++ L + + + L + +L++AV+ A WLL + Sbjct: 61 LVLTKEALLGLPEITRGFEHLAQGLDLLKPMKNSPILTVAVSPAFAAKWLLMRIDDFQTS 120 Query: 117 SPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY 176 +L+++ RT + L G + + L V S K Sbjct: 121 YS-EWDLRLDTNIRTVDYLTEG-IDVGIRYGKGQWEGLEASLLMTESVFPVCSPELLNKG 178 Query: 177 FP--NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQG 234 + + LL + + + + +QN + +N+S + +Q A G Sbjct: 179 IEGIESIAQFPLLHDISLPKESGFPSWKVWFEQNSIFDVNTEKGLKINNSASVIQAAING 238 Query: 235 TTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHK 292 + + ++ +L G L+ L P L L ++ + ++ ++ H+ Sbjct: 239 QGIALGRSVLVKDDLDCGRLVQLFPDLESTTELAYYVVWKQKGIVSDKISVFKEWLHQ 296 >UniRef50_Q28S71 Transcriptional regulator, LysR family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28S71_JANSC Length = 302 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 65/302 (21%), Positives = 104/302 (34%), Gaps = 9/302 (2%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-P 59 MKR D + L AV+ F A L +T SA+SQ +KQLE G PLL RT Sbjct: 1 MKRTDLDGILPLLAVVEHGSFRAGAAALGVTPSAISQSVKQLEERIGVPLLTRTTRSVGL 60 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATW--LLPALAPVLADS 117 T+ GQ + + L L ++A LA L P L + Sbjct: 61 TQAGQLFVDRASPAICEVRDALASISEFGQRPSGLLRISAPRLAYPVALAPVLPEFMKTY 120 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 P + +++ E + ++ + + + L + V + P Sbjct: 121 P-EIEVEISLEDTLTDIVQS-RFDAGIRLGATVEADMVARALTPPSRMCVVASPDYLDAH 178 Query: 178 PNGVTRSALLKAPVVAFD---HLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQG 234 T LL + F H FL++ D IVN + A + A G Sbjct: 179 GVPETPDDLLSHRCINFRRPTRKTVYHWRFLERGEDRHIPVPGVMIVNDTAAKIDAALNG 238 Query: 235 TTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 +E+ + +G LI + G + H + P + + +D+ L Sbjct: 239 FGLAYELAPVVEQHVKAGRLISVLEGYLPEVPGF-HIYYPGRKQIMLKLRVFIDFAAAEL 297 Query: 295 RQ 296 R Sbjct: 298 RS 299 >UniRef50_C5D189 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=C5D189_VARPS Length = 299 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 106/294 (36%), Gaps = 8/294 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPT 60 K P L DA R F +AA++L +T A+S+ +K LE L R R T Sbjct: 7 KLPPLTALPCFDAAARHLSFTKAAEELHLTPGAISRAVKHLEQQLDVQLFERGTRSVRLT 66 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 E G+ +R V + L+++ + WL+P L Sbjct: 67 EVGEPYAKAVRDVLDQLAAATAAATARLSGSTLNVSTSDGFAGRWLVPRLYRFRQAHG-D 125 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 ++++V R G + A+ P + L + V S + P+ Sbjct: 126 IDVRVSTTGRLASFHGDG-IDVAIRYGAGNYPGLTAEWLADEEVFPVCSPRLLK--GPHA 182 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + + A L+ + D +L++ + +S VQ A QG + Sbjct: 183 LRKPADLRHHTLIRDGYPIAWADWLERAGVKGVNARSGLAFDSYTFAVQAAVQGEGVVLG 242 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPES---RMMRKVTDALLDYGH 291 + + +LA+G L+ + ++ + PE+ R ++ + LL+ Sbjct: 243 RTMLVADDLAAGRLVRPFKQALKAFSSFYLVYPPEAMRQRKVKAFKEWLLEEMR 296 >UniRef50_A3UHF6 Transcriptional regulatory protein n=2 Tax=Rhodobacterales RepID=A3UHF6_9RHOB Length = 327 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 69/301 (22%), Positives = 114/301 (37%), Gaps = 13/301 (4%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPPRPT 60 + P +L+A +AV+R R F+ AA +L ++ SA+S +I++LE L+ R T Sbjct: 25 RLPPLASLRAFEAVVRLRSFKAAAAELNVSSSAISHQIRRLETELNCRLMQRNRTGVTLT 84 Query: 61 EQGQKL-LALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALA---PVLAD 116 QG++ + R +E L E +E T L+L + WL+P LA Sbjct: 85 AQGERYAFGVTRGMERLLEAT--EELLSDTGQCLTLQTYSTFAIRWLVPRLASYSRATGQ 142 Query: 117 SPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY 176 PIRL D + + V + I H P L V+S + E+Y Sbjct: 143 KPIRLVTSQSDVDFSTDA-----VDACIMIGHPQDPQVAYRPLFNSHVFPVASPDYLERY 197 Query: 177 FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 P S L P++ D +L + +S + + A G Sbjct: 198 GPISQ-PSDLRGHPLLQVYPSADDWSTWLTATGLSGISPAGEGLFDSYDLALNAAVGGMG 256 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 + EL +G L++L P W+ P ++ A + + L + Sbjct: 257 VALAIEPFAHAELETGALVELFPERRTALPGNWYFATPYAKRGLDKVAAFETWLLEELSR 316 Query: 297 D 297 D Sbjct: 317 D 317 >UniRef50_B2IKM7 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=B2IKM7_BEII9 Length = 306 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 68/300 (22%), Positives = 122/300 (40%), Gaps = 9/300 (3%) Query: 1 MK-RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP 59 MK P TL+A +A R F A+ +L +TQSAVS +I+ LE ++G L R + Sbjct: 1 MKELPPTPTLRAFEAAARHPTFTAASAELNVTQSAVSHQIQYLEELWGMKLFERGRTLKL 60 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 T +G L ++RQ + + L + L +++ + WLLP L + A P Sbjct: 61 TTEGNALAPIIRQFLVSLDATLAGLRRQRDRHPLRISLTQSFASRWLLPRLPSIEASQP- 119 Query: 120 RLNLQVEDETRTQER-LRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 +LQ+ ET +G+ AV + + L V+SK ++ Sbjct: 120 --DLQLWIETTDHPIGFGQGDADIAVRLGTGQYSGLFAELLLREYIFPVASKQLLDRLGM 177 Query: 179 NGVTRSALLKAPVV--AFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 T + LL+ P++ A L + + ++ + + ++ A G Sbjct: 178 PN-TPADLLRYPLLFRAGPDLVPKWEYWFERAGVDVSLAHSGTYYPDTNMTIEAALAGYG 236 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 ++ +EKEL G LI L + L ++ P+ R + ++ + +Q Sbjct: 237 IALVRSGHVEKELRDGLLIRLL-TVRYPSPLAYYFVCPKGRERLPAIASFKEWIVQEAQQ 295 >UniRef50_Q2BZ62 Transcriptional activator AmpR n=1 Tax=Photobacterium sp. SKA34 RepID=Q2BZ62_9GAMM Length = 302 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 104/270 (38%), Gaps = 8/270 (2%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RP 59 + + +L+A A + + F +AA +L +TQ+AVSQ++K LE+ G L R Sbjct: 14 LNQLPLNSLRAFYASAKHQSFTKAANELFVTQTAVSQQVKTLESRLGVTLFNRMPRGISL 73 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 T +G KL ++ +V L L + + G T L+++ V WLLP L P Sbjct: 74 TSEGVKLYPVVEKVFLELTVNLDNLKFGCTRELVNIGVVGTFALNWLLPRLNDFYHHYP- 132 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 ++L++ + G + + + L + + + A + Sbjct: 133 NIDLRISTNNNIADAFSEG-LDYVIRFGRGHWHGTEAELLFNAPFTPLCNPSIASRLH-- 189 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 LL ++ + + Q Q + +S+ V+ A +G + Sbjct: 190 --HPQDLLGYTLLQSYDVHEWEQWLKQASLKTNISKSQTITFDSTILMVEAAIKGYGIAL 247 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYW 269 P +++ +++ ++ + YW Sbjct: 248 APPQIFHEKIIQRQIVQPF-NIYLNKGGYW 276 >UniRef50_P45099 Glycine cleavage system transcriptional activator homolog n=32 Tax=Pasteurellaceae RepID=GCVA_HAEIN Length = 301 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 63/299 (21%), Positives = 114/299 (38%), Gaps = 11/299 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPT 60 + P +L++ ++ R F +AA +LC+TQ+AVS +IK LE G L R T Sbjct: 8 RLPPLNSLKSFESAARYLSFTKAADELCVTQAAVSHQIKLLEXFLGIDLFKRKNRSLELT 67 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-I 119 E G+ + ++ E T T L+++V WL+P L+ P I Sbjct: 68 ELGKAYFVDINKILRRLNEATERLLTLKTDPHLNISVPQTFGIQWLVPHLSEFNQLYPQI 127 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 + L D+ E L E+ A+ + VD+L + L ++S + Sbjct: 128 EVRLTGVDQD---EGLLNKEIDLAIYYGLGNWQNLQVDRLCEENLLILASPELLAEN--P 182 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQ-QNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 + L K ++ D+ Q DL P + + + +Q A G Sbjct: 183 IIQPEDLKKHTLIHIHTCDNWQAMANHLQLDDLNIQQGP--LFSHTFMALQAAIHGQGIV 240 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 + L +E+ +G L + P ++ R+ + A + ++Q+ Sbjct: 241 LANRLLALQEIENGSLQAVLPTNLPDPKSFY-VVNHLDRLDDQKIQAFRQWIINSIKQE 298 >UniRef50_B8IVZ6 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IVZ6_METNO Length = 311 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 68/296 (22%), Positives = 115/296 (38%), Gaps = 11/296 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPPRPT 60 + P ++ L A +A R F RAA +L +TQ A+S++I+QLE L R T Sbjct: 7 RMPSFQELTAFEAAGRHGSFTRAADELALTQGAISKQIRQLETTLETVLFERAKGRVMLT 66 Query: 61 EQGQKLLALLRQVEL-LEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP- 118 G+ LL + ++ + + + L LAV WL+P L LA P Sbjct: 67 AAGRALLPTVGRLLQDYVTAAHSVMASAGSEVTLKLAVLPTFATRWLIPRLPRFLASHPH 126 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 I +NL E E L V A+ +L + VS +AE+Y Sbjct: 127 ITINLVTEPEPF---DLMAQSVDAAIHFGAPNWAQADCIRLCDEAVVAVSGPAYAERYAL 183 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 N + L++A ++ + + + + P + + ++ A+ G Sbjct: 184 NC--PADLVRATLLQQASRPGLWRDWFAAMGFVHPFPFRGPLFDQFAMTIEAAKVGIGIA 241 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESR---MMRKVTDALLDYGH 291 ++P +E+ELA G LI + L Y+ + R + D L+ Sbjct: 242 LLPSFLVEQELADGSLIQIAAPLLTGSGSYYIVVPIDRRREFTIVSFVDWLVAEAA 297 >UniRef50_A9M598 Transcriptional regulator, LysR family n=45 Tax=Rhizobiales RepID=A9M598_BRUC2 Length = 310 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 102/296 (34%), Gaps = 7/296 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTE 61 P L A DAV R F AA +L +TQ AVS+++ LE G L RT +E Sbjct: 9 LPSTSALAAFDAVARHESFSAAADELSLTQGAVSRQVASLEEQLGAALFDRTSRNVVLSE 68 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G+ L + + L+LA WL+P + +A P + Sbjct: 69 AGRVYLQAIGPALASIRAASLQVMSQMRGTTLNLAFLPTFGTRWLIPRIPRFVAQYP-HI 127 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 L + R G + A+ I P+ L V S F + + Sbjct: 128 ILNFATRIGQFDFDREG-LDAAIHIGQPDWPNAECTFLMDETVAPVCSPAFLKDH--PVT 184 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 + LL+ P+ + + + + + Q G ++P Sbjct: 185 SPHDLLRLPLFNMASRPGAWEHWFR-SLGITTPVPGGMRFEQFSNVSQACVAGLGMGLMP 243 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 I E+ +G+LI P + Y+ AP++R A D+ +R + Sbjct: 244 LFLIRSEIENGQLIVACPHTVKSPSSYY-FVAPKTRAKTPAVTAFRDWLLAEVRNE 298 >UniRef50_D0D8S3 Transcriptional regulator, LysR family n=1 Tax=Citreicella sp. SE45 RepID=D0D8S3_9RHOB Length = 300 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 67/279 (24%), Positives = 108/279 (38%), Gaps = 12/279 (4%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTE 61 PD R LQ + R F RA ++L +TQSAVS++I+ LE G+ L R T Sbjct: 8 LPDMRILQTFELAARHGNFTRAGEELALTQSAVSRQIRDLEEQLGKLLFERLRGRVVLTR 67 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLL-LSLAVNADSLATWLLPALAPVLADSP-I 119 G+ LL ++++ + E + G+ LS+ WL+P LA LA P + Sbjct: 68 AGEDLLPEVQRLLRMAERTMRHATAGAAGETVLSVNALPSFAQRWLVPRLAEYLAQHPGL 127 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 RL+L + + + A+ P L + + V+ P Sbjct: 128 RLDLSTRGGIFDFDEV---QCDLAIHYGQPIWPGGCCTYLCSEIVVPVAGAAL-----PA 179 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 AL + P + + + + + H V+ ++ R G + Sbjct: 180 VTRAEALAERPKIHLAERPALWSEWFGRQGVELENANEGHWVDEIALAIETVRAGLGYAL 239 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRM 278 +P IE+ELA+G L F M Y+ PE R Sbjct: 240 LPLYLIEQELAAGTLRVALDAPFSTDMAYY-IVTPEGRA 277 >UniRef50_C8WTC6 Transcriptional regulator, LysR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WTC6_ALIAD Length = 304 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 76/301 (25%), Positives = 128/301 (42%), Gaps = 11/301 (3%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQG 63 D++ L V RER F RA+ L QS+VS +I+ LE G PL R + TE G Sbjct: 2 DFKQLHTFAVVARERSFTRASALLNYAQSSVSAQIQALEQELGTPLFDRIGRSVQLTEVG 61 Query: 64 QKLLALLRQVELLEEEWLGDEQTGSTP-LLLSLAVNADSLATWLLPALAPVLADSP-IRL 121 QK+L L+ + +E E + G P L + +A L PALA P + L Sbjct: 62 QKVLPLVHDLLQMESELRSIAKGGYEPSGTLVVGAPESLIAYRLPPALAVFHQRYPRVHL 121 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 + + + L RGE+ A+ ++ A P+ L + + + + + P P+ Sbjct: 122 QFRADSCAEHRAALARGEIDVALLLEQSAPPAGLAFQTLTPERIVLVAHPKIAASNPSAS 181 Query: 182 TRSALLKAPVVAFD---HLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 T S + A ++ + + F +Q + S EA Q A G Sbjct: 182 TPSLIESAVLLLVEASKGGASYREVFERQMMQMGIRIQRSMEFASVEAVKQCAIAGLGIA 241 Query: 239 MIPHLQIEKELASGELIDL-TPGLFQRRMLYWH--RFAPESRMMRKVTDALLDYGHKVLR 295 ++P + +++EL +G+L L L L W R+ P++ R+ + Y ++V + Sbjct: 242 LLPEMVVQQELDAGKLTRLPWNDLKIPTYLAWRDGRWMPQAA--REWIKCVRTYAYRVCQ 299 Query: 296 Q 296 Sbjct: 300 S 300 >UniRef50_C3K1T6 Putative LysR-family transcriptional regulator n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K1T6_PSEFS Length = 348 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 65/293 (22%), Positives = 115/293 (39%), Gaps = 13/293 (4%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQ 62 P LQ +A R F RAA++L +TQSAVS+++ QLE M L R + Sbjct: 59 PSMTALQCFEAAARHLSFTRAAEELHLTQSAVSKQVAQLEEMLCHNLFERVRQRLYLSPA 118 Query: 63 GQKLLALLRQVELLEEEWLGDEQT-GSTPLLLSLAVNADSLATWLLPALAPVLADSP-IR 120 G LA + ++ + T G +L +A WL+P L A P I Sbjct: 119 GSLYLAEVHKILTQVDISSRYILTYGGETEVLRIATQPTFGDRWLVPKLKDFAAKHPNIH 178 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L+++ E E + + + A + P +L + V + F + + Sbjct: 179 LDVRNELEPF---DVLQAKADIAFFFGQGSWPGATCIELFREAVVPVCAPGFVPE-GSDA 234 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 +R LL+ + H+ FL+Q S ++ ++ A+ G ++ Sbjct: 235 SSRHTLLQCT----SRPEAWHEWFLEQGLH-SQNSYHGPRFDTFYMCIRAAQSGYGVALV 289 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 P + +ELA G L+ ++ A + + KV +A L++ + Sbjct: 290 PQYLVAEELAQGSLMIPWDYAMPSSGAHFIAHAEHAGEIPKV-NAFLNWMVEY 341 >UniRef50_A6T0X1 Transcriptional regulator, LysR family, glycine cleavage system n=19 Tax=Bacteria RepID=A6T0X1_JANMA Length = 311 Score = 177 bits (448), Expect = 5e-43, Method: Composition-based stats. Identities = 61/298 (20%), Positives = 115/298 (38%), Gaps = 11/298 (3%) Query: 1 MKRP-DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR- 58 MK P L+A +A R + F AA +L +T +AV Q ++ LE+ G PL R+ R Sbjct: 1 MKSPIYLNALRAFEASARHQSFSAAAAELNVTPAAVGQLVRSLEDWLGTPLFNRSASGRA 60 Query: 59 ---PTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLA 115 TE Q+ L +R L + G+ +L++ V+ A WLLP + A Sbjct: 61 RLIATEAAQRALPEIRAGLDKLSLGLERLKEGAINGVLTVTVSPAFAAKWLLPRIDTFQA 120 Query: 116 DSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEK 175 P +++++ + + + G + V + + +KL + V S + Sbjct: 121 AWP-DTDVRLDTSLKPVDFVALG-IDIGVRYGNGDWAGLIAEKLLDEEIYPVCSPLLLRQ 178 Query: 176 ----YFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLA 231 P + + L+ + + +L+ ++ +N+S A +Q A Sbjct: 179 KQRLRKPTDLGKETLIHDLSIESHKDFPSWKQWLKVAGVDHTETMRGMRINNSAAVLQAA 238 Query: 232 RQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDY 289 G + + ++A+ L+ L P + L + R A D+ Sbjct: 239 IDGQGIALARSVMARDDVAASRLVRLFPDIKFTSPLAYFIVYRAERASLPRLAAFRDW 296 >UniRef50_B8CNJ7 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CNJ7_SHEPW Length = 278 Score = 177 bits (448), Expect = 6e-43, Method: Composition-based stats. Identities = 67/272 (24%), Positives = 107/272 (39%), Gaps = 14/272 (5%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPT 60 K P R LQ +A R+ F +AA +LCITQSAVS +++QLE FG+ L R R T Sbjct: 3 KIPPLRALQVFEAAARQSHFSKAADELCITQSAVSHQVRQLEEHFGERLFKREGRQLRLT 62 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 +GQ L L ++ + L + +G + L LAV + WL+P L+ P Sbjct: 63 TKGQHLYESLERIFNELSD-LSKKISGDSNDQLRLAVYSSFAIKWLIPRLSDFRRLHP-- 119 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 +++ + T + V P L + V S P Sbjct: 120 -EIKIRLDMITDDPELSDSVADMFITGQSDQPGYYHQSLHKERLVPVISPILLSSDDP-- 176 Query: 181 VTRSALLKAPVVAFDHLD---DMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 L P++ D D + F+ + LPP HI + ++ A G Sbjct: 177 --AHELGSHPLLTVDEGPLGLDWDRWFIANDMILPPEQQ-QHIFSHVLLAIEAAIAGQGI 233 Query: 238 CMIPHLQIEKELASGELIDL-TPGLFQRRMLY 268 + ++ ++ G L++L P + Y Sbjct: 234 ALASDFMVQTDIEKGVLVELALPDILTGFEFY 265 >UniRef50_B9Z6G4 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z6G4_9NEIS Length = 290 Score = 177 bits (448), Expect = 6e-43, Method: Composition-based stats. Identities = 62/293 (21%), Positives = 107/293 (36%), Gaps = 9/293 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 K P L+ +AV R + F +AA+ L +TQSAVS +I++LE FG PLLVR T Sbjct: 3 KLPPLNALRIFEAVARLQSFTKAAEALYLTQSAVSHQIRKLEEHFGFPLLVRGQRGIDLT 62 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 +G L + L ++ +Q + + WL+P L P Sbjct: 63 PEGAILQHSVHDALLQIDQTC--DQLSQRHHAIRIKSPPSIAVRWLVPHLQAFKQQFP-D 119 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L++ V + G A+ P V+ L + V++ + Sbjct: 120 LDISVSTVWEEKPAFDWGLFDLAIQYGIGDWPGVTVELLHREQLIPVAAPALLQGR--QT 177 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 +T L ++ + +L P + ++ V+ AR G +I Sbjct: 178 LTPDDLATQTLIHSTRDRHDWRLWLGLPAGEWPKGQKELLFDADVMAVEAARCGLGVALI 237 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAP---ESRMMRKVTDALLDYG 290 ++ L G L+ Q Y+ P SR ++ + + L + Sbjct: 238 DPFLVQDALDDGSLLTPLQRTVQTGKAYYLVRPPHDRHSRRLQPLVEWLQNAA 290 >UniRef50_B8H3M0 Transcriptional regulator, LysR family n=12 Tax=Alphaproteobacteria RepID=B8H3M0_CAUCN Length = 318 Score = 177 bits (448), Expect = 6e-43, Method: Composition-based stats. Identities = 65/298 (21%), Positives = 102/298 (34%), Gaps = 15/298 (5%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPPRPT 60 + P L+A +A R F RAA +L +T AVSQ+I+ LE+ G L RT T Sbjct: 9 RLPPLNALRAFEAAARHLNFSRAADELSVTPGAVSQQIQNLEDYVGAALFKRTPKGLLLT 68 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-I 119 + Q L LR+ E L+L A WL+P L P + Sbjct: 69 DAAQTALPALREAFDRLAEAASLLTAAVDGRRLTLTAAPSFAAKWLVPRLGKFEQAHPQV 128 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 + L E GEV A+ P V +L + V+S E+ N Sbjct: 129 DVWLSAGME---VVDFATGEVDMAIRYGSGRYPGLEVIRLLHETVVPVASPELLEQ---N 182 Query: 180 GVTRSALLKAPVVAFDHLDDM------HQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQ 233 + R L+ ++ D D +L N S ++ A Sbjct: 183 ALERPEDLQHHILLHDGSPDADDSCPDWAMWLAARGIRGVDGARGPRFNQSSLVIEAAAN 242 Query: 234 GTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGH 291 G + + +L SG L+ Y+ P+++ A +++ Sbjct: 243 GRGIALAKRTLAQADLDSGRLVIPFEASTAVDFAYY-VVHPKAKGRLPQVKAFVNWLK 299 >UniRef50_A1AYS4 Transcriptional regulator, LysR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1AYS4_PARDP Length = 294 Score = 176 bits (447), Expect = 7e-43, Method: Composition-based stats. Identities = 66/300 (22%), Positives = 115/300 (38%), Gaps = 11/300 (3%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RP 59 M P L+A +AV R F RAA++L +TQ+AVS +I+ LE PL +R Sbjct: 1 MSIPPLAALRAFEAVARHLSFTRAAEELGMTQAAVSYQIRLLEERLATPLFLRKPRGIVL 60 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 TE G + E D + + LS++ WL P L + P Sbjct: 61 TETGALFARPTIDAFDMLREAYADP-SADSVSTLSISTVPTFAGAWLSPRLGKFQMNHP- 118 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 L +++E + R ++ A+ P L ++Y + S A+K+ Sbjct: 119 NLAVRLETSDNLVD-FGREDITVAIRAGEGGWPGVEEHCLMPIEYTPMLSPELAKKH--E 175 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDL--PPGSVPCHIVNSSEAFVQLARQGTTC 237 + LL P++ D +D ++++ P +++ + A +G Sbjct: 176 LREPADLLNLPLL--DRVDPNWAVWMREAGVDFWESPPRPGLTLSTDLHEARAALEGYGV 233 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 ++ ELA+G LI P + Q +W P+ R R + + +D Sbjct: 234 ALLTPRFFRFELATGSLIQPFPLVAQNGRSFW-LVYPKGRRNRPAIRKFRAFLLDEIARD 292 >UniRef50_C0Z518 Transcriptional regulator n=3 Tax=Paenibacillaceae RepID=C0Z518_BREBN Length = 295 Score = 176 bits (446), Expect = 9e-43, Method: Composition-based stats. Identities = 61/293 (20%), Positives = 108/293 (36%), Gaps = 6/293 (2%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQG 63 + L V R F RAA++L Q V+ ++++LE +G PL R R T+ G Sbjct: 2 ELVYLHTFREVARYGSFTRAAEELGYAQPTVTAQMQKLEQSYGAPLFERYGRKLRLTQAG 61 Query: 64 QKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IRLN 122 + LL R++ L E + T +++ A +L P L P + L Sbjct: 62 EALLPYARELIRLYGESKEVIKH-QTTGPIAIGTIDTLAAFFLPPYLQAFCQQYPQVDLV 120 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 L+ E +++R G + + LV + + L V P +T Sbjct: 121 LRTAGEAEIVQQIRDGYLDFGIIFDRPCTDPELVTHVIREEELVVVMPPAHRFTTATALT 180 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 L P+V + L+ + ++ EA Q R G ++P Sbjct: 181 VHDLGGEPLVLTEEGCTYRGMLLEAFGEAGMTQRIACQFSNPEAIKQCVRCGLGVALLPV 240 Query: 243 LQIEKELASGELIDL---TPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHK 292 + +++ELA G L + + L +H+ S M + D + + Sbjct: 241 MAVQRELAEGVLTAIPFQSDKPPFSIQLVYHKKKWLSPSMVTLVDTITRSQRE 293 >UniRef50_B9K5H2 Transcriptional regulator LysR family n=1 Tax=Agrobacterium vitis S4 RepID=B9K5H2_AGRVS Length = 296 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 64/301 (21%), Positives = 125/301 (41%), Gaps = 13/301 (4%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RP 59 M R + L+ AVI R F +A + +++ A+S+ I++LE G L+ RT P Sbjct: 1 MDR--FTALKVFCAVIEARSFTKAGNNIGLSRPAISKNIRELEAHVGVTLVNRTTRGVMP 58 Query: 60 TEQGQKLLALLRQVELLEEEW--LGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 +E G + ++ ++ E+ + + L + + +LP L ++ Sbjct: 59 SEAGSRYYQIVSELLWRHEQADEVASQSGAELRGTLRVTMPVTLGLHLILPVLPQFNEEN 118 Query: 118 P-IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDK-LGALDYLFVSSKPFAEK 175 P L+L + +E +++L G AV + S L+ + +G++ Y ++ + +K Sbjct: 119 PECSLDLCLSEE---KQQLVEGNFDVAVRASQRLEDSTLMSRCIGSVTYAICAAPSYVQK 175 Query: 176 YFPNGVTRSALLKAPVVAFD-HLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQG 234 + + L +V ++ D F Q H N SEA L G Sbjct: 176 S-QSLKSPKDLEDHQLVVHGANIGDQKWRFSAQGESCYVSVRAQHKSNCSEAIKSLTVAG 234 Query: 235 TTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 IP + +ELA G L++L + + + P+S + + T +D+ + L Sbjct: 235 MGIARIPRPYVSRELAEGRLVELLSDWTMEPLTIYAMY-PQSNFLPRRTRLFIDFMSRAL 293 Query: 295 R 295 + Sbjct: 294 K 294 >UniRef50_B1JZS0 Transcriptional regulator, LysR family n=19 Tax=Burkholderiales RepID=B1JZS0_BURCC Length = 306 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 66/305 (21%), Positives = 116/305 (38%), Gaps = 13/305 (4%) Query: 1 MKR---PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-P 56 M+R P +TL+A +A +R + F RAA +L +TQ AVSQ I+ LE G PL R Sbjct: 1 MRRIHLPPLQTLRAFEAAVRLQSFTRAADELALTQGAVSQHIRALEAQLGYPLFTRERNG 60 Query: 57 PRPTEQGQKLLALLRQVELLEEEWLG-----DEQTGSTPLLLSLAVNADSLATWLLPALA 111 PT L +RQ + E + + + L+++V WL P L Sbjct: 61 ATPTHAAHALALQVRQGLSVLERAFEPTLAVRRRPRTCDVTLNVSVLPSVAERWLAPRLP 120 Query: 112 PVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKP 171 A P +++ + + +R + A+ P + +KL V+S Sbjct: 121 RFSAAHP-HISIVLHPDVALAPLRKRDRIDVALRYGPGTWPGVVAEKLMNETIFPVASPA 179 Query: 172 FAEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLA 231 + + T + L++A ++ H + + Q S + A + A Sbjct: 180 YRNRDGVAPRTPADLVRATLLR--HPAQPWEPWCQAARLDLTESARAPRFTDTNALIDAA 237 Query: 232 RQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGH 291 +G + IE EL G L+ ++ ++ + P LD+ Sbjct: 238 LKGRGVALARRSLIEPELTDGTLVRVSTVRITDVYAHYVVWRP-GHPHEAAIRTWLDWLR 296 Query: 292 KVLRQ 296 +R+ Sbjct: 297 SEVRR 301 >UniRef50_Q28K92 Transcriptional regulator, LysR family n=2 Tax=Rhodobacteraceae RepID=Q28K92_JANSC Length = 321 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 64/290 (22%), Positives = 107/290 (36%), Gaps = 7/290 (2%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRP 59 ++ Y +L+A +AV+R F AA L ++QSAVSQ +K LE GQ LLVR + Sbjct: 14 IRNLPYASLRAFEAVVRLGSFSAAAGDLGVSQSAVSQHVKSLEEWLGQELLVRGARASKG 73 Query: 60 TEQGQKLLALL-RQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 T G L + R + + E + + ++ TWL P L P Sbjct: 74 TRYGTLLAREIDRGLGGISEVCTQIRAASHSDTTVVISCLPGFAFTWLFPRLLRFDLAHP 133 Query: 119 IRLNLQVEDETRTQER-LRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 +L + T T R + + H P+ VD L V + AE+ Sbjct: 134 ---DLSISIATDTGGRPFNPADADIGIRYGHGEFPNLRVDHLMGERLFPVCAPQVAERLT 190 Query: 178 P-NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 + + LL+ ++ F + + + + P S +Q A +G Sbjct: 191 DVASLGQHTLLQDEILNFGSANPSWEYWAEACGVHLPSRARTRRFGQSNLVLQAAIEGLG 250 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDAL 286 + + L G L+ + + YW ++ KV + L Sbjct: 251 VALGREPLVLDALTDGRLVRPFTQNVKSPLSYWLVRRKQADDSPKVQEFL 300 >UniRef50_A8TTL8 Transcriptional Regulator, LysR family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TTL8_9PROT Length = 294 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 64/290 (22%), Positives = 107/290 (36%), Gaps = 10/290 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTE 61 P TL+A DA R F RAA L +T AVS++I LE G + RT PTE Sbjct: 4 LPPLNTLRAFDAAARHGSFSRAADALNVTHGAVSKQIASLEAFLGVTVFERTAHGLEPTE 63 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G L ++ + E + + +TP L+++V A WL+ + L P + Sbjct: 64 AGAVLAPIVAEALDAMAEGVRRVRRSATPSTLTISVLPSFAAHWLIHRMPRFLDRHP-EI 122 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +++ R + L + +V A+ P + V + A + + Sbjct: 123 DVRFFTTRRVVD-LTKEDVDLAIRYGLGDWPGVHAECFMRETLTPVYAPALAALH--PEL 179 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGS-VPCHIVNSSEAFVQLARQGTTCCMI 240 + LL+ + H D + + LP P + + + +Q G + Sbjct: 180 EPTDLLRF-TIHSHHTDASNWKLWRIGMGLPDSDLPPVAVYDDTALAMQAVLGGQGVILG 238 Query: 241 PHLQIEKELASGELIDLTP-GLFQRRMLYWHRFAPESRMMRKVTDALLDY 289 I LA+G L+ L+ + Y E R A D+ Sbjct: 239 RSPLITDALAAGRLVRLSEVDIPSAESDY--LVCLERHRARPAIKAFRDW 286 >UniRef50_C9Y5B3 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y5B3_CROTZ Length = 313 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 110/294 (37%), Gaps = 12/294 (4%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQG 63 + L + F +AA+ L I+ SAV + + +LE G L R+ T +G Sbjct: 11 SFTALASFVRTAETLSFTQAARVLGISASAVGKNVARLEQKLGVRLFNRSTRSVSLTAEG 70 Query: 64 QKLLALLR----QVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 LLA R Q+ E E T S L +SL V L L+P L A P Sbjct: 71 ATLLARCRPALEQLREAEAELTSATDTPSGRLRISLPVIGYHL---LMPFLPAFAARYP- 126 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 ++++++ R + G A+ A LG ++ +S + ++ Sbjct: 127 EIDIELDFSDRLVNLVDEG-FDVAIRSGEMADSRLTATTLGHFRFVLCASPVYLAEHGAP 185 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 T AL K + F + G+ VN+ EA ++ A G C Sbjct: 186 Q-TPDALKKHRCILFRFPSTGLIQPWELTGLTMTGAPSALTVNNIEAMIRAAVAGMGICY 244 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 +P + L GEL ++ PG +RR + + SR + +D+ Sbjct: 245 VPDFIVNSLLTRGELQEVMPGCCERRGAFSALWQ-TSRYLSPRIRCFVDFLKAH 297 >UniRef50_P52676 Carbapenem-hydrolyzing beta-lactamase transcriptional activator n=5 Tax=Enterobacteriaceae RepID=NMCR_ENTCL Length = 295 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 55/299 (18%), Positives = 118/299 (39%), Gaps = 16/299 (5%) Query: 1 MK-RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-R 58 M+ R L+A +A R F +A +L ++Q+AVSQ+++ LE M G L R + Sbjct: 1 MRARLPLNALRAFEASARYLNFTKAGLELHVSQAAVSQQVRTLEQMLGVALFTRVPRGLQ 60 Query: 59 PTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 T++G LL + + + + G +L++AV WLLP + L ++P Sbjct: 61 LTDEGMHLLPSITEALQMMSSAMDKFHEGKIKEVLTIAVVGTFAIGWLLPRITAFLNENP 120 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 +++++ G + ++ + L + + S ++K + Sbjct: 121 W-IDIRILTHNNVVNLAAEG-IDASIRFGTGGWINTENILLFQAPHTVLCSPETSKKLY- 177 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 S L K ++ ++ + F D P ++ I +S+ + + G Sbjct: 178 ---IPSDLKKVCLLRSYRKEEWNNWFKAAGID--PWTITGPIFDSTRLMIDAVKLGDYAA 232 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYW-----HRFAPESRMMRKVTDALLDYGHK 292 ++P+ +KEL + ++ YW R S + + ++++ + Sbjct: 233 LVPYHMFQKELNERSVAKPF-EIYATLGGYWLTLQKSRVNHNSEALNVFKEWIIEHSRE 290 >UniRef50_A4BIQ6 Transcriptional regulator, LysR family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BIQ6_9GAMM Length = 301 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 62/302 (20%), Positives = 115/302 (38%), Gaps = 11/302 (3%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-P 59 M R D +L V++ F AA +L +T SAVS++I LE+ G LL RT P Sbjct: 1 MARLD--SLIIFTTVVKANNFTNAAHQLGLTPSAVSKQISLLEDRLGVRLLNRTTRSVSP 58 Query: 60 TEQGQKLLALLRQVE--LLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 TE GQ ++ L E E + + S L ++ L+ A L Sbjct: 59 TEAGQLFFNRCSRLLEDLEEAEHMVKDLETSPRGTLKISATPTFGRAMLMKIFAQFLEQY 118 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 P +N + + + +R G + A+ + + + + V SK + ++ Sbjct: 119 P-DVNFDLTLADKGLDLVREG-IDLAIHLGSLQDSRLVARPVARQKVILVGSKEYLAEH- 175 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLP--PGSVPCHIVNSSEAFVQLARQGT 235 + L+ ++ +D ++++ VN + + A G Sbjct: 176 GQPEALNELVNHFILMVSGIDFAEPRWIKRFIKEAGLSNKDRRFTVNDLDTLCEAALNGM 235 Query: 236 TCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 +P I + L SG+L+ + P + H PE+R + + A +D+ Sbjct: 236 GLAALPVYMIREHLDSGKLVHILPDIHFPVRTI-HVVYPENRYLSAKSRAFVDFMASYFD 294 Query: 296 QD 297 ++ Sbjct: 295 EN 296 >UniRef50_Q145M0 Transcriptional regulator, LysR family n=15 Tax=Proteobacteria RepID=Q145M0_BURXL Length = 310 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 68/298 (22%), Positives = 105/298 (35%), Gaps = 20/298 (6%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQ 62 P L+ +AV R G +AA++L +T SAVSQ+IK LE G L +R R TE+ Sbjct: 5 PPLTALRCFEAVARLGGVTQAARELHVTHSAVSQQIKVLEESMGVALFMRAARGLRLTEE 64 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IRL 121 G+ +R Q L + WL+P LA P R+ Sbjct: 65 GRLYALDIRMALRDITHATRRAQARPHESELVITTLPSFAQHWLVPRLASFRDAHPYYRI 124 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG- 180 L + E R+G + + P KL + + V++ FA P+G Sbjct: 125 RLLTSLQ---VEDFRQGVSDIGIRMGQGHWPDVAQQKLFDDEMVVVAAPHFA--LAPDGR 179 Query: 181 --VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 VT + ++ P+++ H+ P N S + QG Sbjct: 180 FPVTAADVMACPLISSPD-TPWHEWCQAAQVSEPAEGAVVLSANDSNLVIAAVLQGQGVA 238 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 + + LA GEL+ +T YW + +LD Q Sbjct: 239 LERRSLVAYALARGELLQITDIRVPYPYPYWLVWQ---------QREILDAAQAHFAQ 287 >UniRef50_A5V722 Transcriptional regulator, LysR family n=22 Tax=Proteobacteria RepID=A5V722_SPHWW Length = 326 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 65/295 (22%), Positives = 107/295 (36%), Gaps = 11/295 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRPTE 61 P L A DA R + F AA++L +TQSAVS++I+ LE + G L R + T Sbjct: 34 LPPTALLCAFDAAARHQSFTAAARELALTQSAVSRQIRALEELLGSELFHREKQKVKLTL 93 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G +R + L LA+ WL+P L LA P Sbjct: 94 AGNAYAREIRGALARISSATLGFRANPGGASLHLALLPMFGLRWLMPRLPGFLAAHP--- 150 Query: 122 NLQVEDETRTQE-RLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 ++ V TRT R + A+ +D+L + S + Sbjct: 151 DITVHVSTRTTPFDFRTETIDAAIHFGEGEWAGAQLDRLMGETVAPLCSPALRARLGA-- 208 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + L++AP++ D + + ++ PG V +++ + AR G ++ Sbjct: 209 AKPADLIEAPLLHLMSRPDAWERWFA-AMEVDPGEVHGMLLDQFLLVAEAARAGLGVALL 267 Query: 241 PHLQIEKELASGELIDLTPGLFQR---RMLYWHRFAPESRMMRKVTDALLDYGHK 292 P +E EL SG+L+ + L W + +L K Sbjct: 268 PEFLVEAELRSGDLVRALDAPVVQADHYYLVWPHTHERHPPLDAFRTWILQEARK 322 >UniRef50_A3X5F2 Probable transcriptional regulator n=1 Tax=Roseobacter sp. MED193 RepID=A3X5F2_9RHOB Length = 299 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 69/298 (23%), Positives = 115/298 (38%), Gaps = 8/298 (2%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQG 63 D L+ V + F A+ T SAVS++I +LE LL RT + TE G Sbjct: 3 DLNLLRLFVLVADQGSFSAVARSTRATPSAVSRQISRLEENLNTRLLQRTTRRQELTEAG 62 Query: 64 QKLLALLRQV--ELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 Q L+ RQ+ ++ + + +L + AD T L P L L P L Sbjct: 63 QVYLSHARQIIEDVDTARQAVSRLSNAPSGVLRITAEADLALTLLSPVLPEFLERYP-DL 121 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +Q+ + ++ + RG + A+ + H + S + +L L V+S + E+ P Sbjct: 122 RVQLHTSSTMEDLVSRG-IDVAIRVGHLSDSSLIAKRLTMSRSLLVASPEYLEQDIPPQQ 180 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSS-EAFVQLARQGTTCCMI 240 L ++F D+ + ++ V I SS + A+ G M+ Sbjct: 181 -PEDLRNHSCLSFKVDTDLVTWRFKSGEEVTNVPVTGPIQASSLVLLKEAAKSGLGIAML 239 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYW-HRFAPESRMMRKVTDALLDYGHKVLRQD 297 P + EL SG L+ + PG P R + L+D+ + D Sbjct: 240 PVWMLRAELKSGTLVPVLPGFPLDPAATPISAVYPSGRNLASKVRVLIDFLAIRIEHD 297 >UniRef50_B1KBZ9 Transcriptional regulator, LysR family n=33 Tax=Proteobacteria RepID=B1KBZ9_BURCC Length = 343 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 54/288 (18%), Positives = 107/288 (37%), Gaps = 6/288 (2%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQ 62 P L +A R + RAA++L ++QSA+S++++ LE+ G PL R + TE Sbjct: 55 PSMSLLLVFEAAARHESYTRAAEELSLSQSAISRQVQTLEDQLGVPLFRREGRSVKLTEV 114 Query: 63 GQKLLALLRQVE-LLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G++ A L + L + L LA + WLLP L A + Sbjct: 115 GRRYFAELSGALGRIRGATLQAMSHQAGAGTLRLATLPTFGSKWLLPHLHGFYAAHS-GV 173 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 + + + L ++ A+++ P +L + ++ + Sbjct: 174 TVHLHSRIGAIDFL-NDDLDAAITVGAGDWPGLHAHRLYNEFLIAIAPPDTGRGRKADAR 232 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 T + K ++ + + +Q R G ++P Sbjct: 233 TPAWAAKQTLLGVTSNQQAWAEWFSHYRLDHRQMRIGPSFELTSHLIQAVRAGMGIGLVP 292 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDY 289 + +E EL+ GEL+ + + +R Y+ + P + + + A D+ Sbjct: 293 KVLVEDELSRGELVSIGDAITSQRS-YYLVYPPGNETLPSLV-AFRDW 338 >UniRef50_C3K0C2 Putative LysR family regulatory protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K0C2_PSEFS Length = 301 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 69/298 (23%), Positives = 112/298 (37%), Gaps = 14/298 (4%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTE 61 P ++L A +A IR AA +L TQ A+SQRI+ LE G L R RPT Sbjct: 8 LPPLKSLVAFEATIRLGSMTAAAVELGTTQPAISQRIRTLEESLGCVLFERNGKLLRPTY 67 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTG--STPLLLSLAVNADSLATWLLPALAPVLADSP- 118 +GQ++ + L + + + LS+A N WL+P L + P Sbjct: 68 EGQQIYSGLASPVSEIKAAVKRMRRHFNKQKPTLSIAANFGFCYFWLMPKLPALQGQFPQ 127 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY-F 177 I+ ++ + + + A+ L V S AEK Sbjct: 128 IQFKIRPVN---LDDDPMLQDADIAIQFGSLDGDFRFEKLLIPETVFPVCSPDLAEKLGL 184 Query: 178 PNGVTRSALLKAPVVAFD----HLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQ 233 G S++ P++ D D H L PP P N+ + A++ Sbjct: 185 MEGTKISSIEDLPLLHKDSDDSRWLDWHHWCLHAKI-TPPEEAPVFCFNNYPLLLTAAQE 243 Query: 234 GTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLY-WHRFAPESRMMRKVTDALLDYG 290 G + IE+++ +G+LI L P + + Y E+ ++R V L+ Sbjct: 244 GQGIALGWAGLIEEQIKAGKLIALGPSVDRPHRGYIVRSNYHETLLVRDVLQWLIAAS 301 >UniRef50_C5SQF2 Transcriptional regulator, LysR family n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SQF2_9CAUL Length = 320 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 60/299 (20%), Positives = 103/299 (34%), Gaps = 8/299 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPT 60 + P L+ +A R F+ AA++L +T AVSQ+I+ LE G L VR + Sbjct: 5 RLPPLSALRVFEAAARHESFKHAAEELFVTPGAVSQQIRLLEEHVGVELFVRDGRRVVLS 64 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 + G+ +L++ E + ++++V A WL+P L A +P Sbjct: 65 DAGKASSIILKEAFEKMFEATRIMRQTQQKGRVTVSVAPSFAAKWLMPRLGDFSAANP-- 122 Query: 121 LNLQVEDETRTQE-RLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEK---Y 176 ++ V ++ A+ V+ L L V S E Sbjct: 123 -DIDVWVSADMAPTDFAVSDIDLAIRYGTGNYNGLNVEHLLEEAVLPVCSPALYEAAPIR 181 Query: 177 FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 P +T LL D D +L+ + + N S ++ A G Sbjct: 182 KPADLTHHTLLHDVSSDLDPSDPDWAMWLKAHGAEEIDASRGPRFNQSHMVIEAAVAGRG 241 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 + E +L +G L L +H P++R +D+ R Sbjct: 242 VALAKRTIAEADLRAGRLRGLFNEKDAPVSFGYHLVWPQTREPSMAQVRFMDWLRAQAR 300 >UniRef50_A9BQB4 Transcriptional regulator, LysR family n=7 Tax=Comamonadaceae RepID=A9BQB4_DELAS Length = 336 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 106/298 (35%), Gaps = 11/298 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRPTE 61 P L+A V+R G RAA+ L +TQSAVS++I++LE G PL R R T Sbjct: 7 NPPTHLLRAFSTVVRFGGVSRAAEALHLTQSAVSKQIQELEKWVGVPLFERERKRLRLTP 66 Query: 62 QGQKLLALLRQVE-LLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-I 119 G++ +R + LE L + + L L+ A WL+P L P I Sbjct: 67 AGERYERAVRALLGQLEAATLELITSDDSRGALHLSSLPTFAAKWLIPRLPQFQQRYPQI 126 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 L+ + + + A+ L ++ P Sbjct: 127 TLHFVPYVHSY---QFDSPGLDCAILFGDGHWNGAHAHYLVGRQVALIA-PPRGAGPEAR 182 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 T + + + + D + + + + + + ++ G + Sbjct: 183 ITTPQDVARCTRLRHVTIPDAWARWSEAHGVNGISPLAGPQFDQFQTIIRAVMAGMGIAL 242 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRML-YWHRFAPESR---MMRKVTDALLDYGHKV 293 +P + E+A+G + + P + L YW + + + + L+D+ + Sbjct: 243 VPRCLVHDEIAAGLVNEPLPQHGYQSALGYWLCYPADRANHGTLGIFRNWLVDHAAQT 300 >UniRef50_C7CHT6 Transcriptional regulator, LysR family n=3 Tax=Methylobacterium extorquens group RepID=C7CHT6_METED Length = 312 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 68/297 (22%), Positives = 106/297 (35%), Gaps = 10/297 (3%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPP 57 M+R P TL+A +A R F AA +L +T +A+S +I+ LE G L R T Sbjct: 3 MRRSLPPLATLRAFEAAGRRLSFRGAADELGVTPTAISHQIRLLEQTLGLRLFHRETRRV 62 Query: 58 RPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 R T +G LL +LR E + + +L+L+ +A WL+P LA A Sbjct: 63 RLTAEGAVLLPVLRDGFDAFAEAIDQIRGRRAAGVLTLSAPTAFVAKWLVPRLADFRAAH 122 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 P +L++ + R G V AV +L A S A + Sbjct: 123 PA-CDLRLHASDSLIDFARDG-VDVAVRYGPGPYSDFDAHRLLAERVTPACSPHLAIRSV 180 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 + + LL A+L+ + +Q A G Sbjct: 181 GD-LRHHTLLHFEWPRLTDETPTWPAWLRHAGVTGVDGRAGIRFSDEGHVIQAAIAGQGI 239 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYW---HRFAPESRMMRKVTDALLDYGH 291 ++ + EL SG L+ G YW R + + K+ L+ Sbjct: 240 ALLSDVLTADELTSGALVQPF-GPVLDAHPYWVVRPRHSVRKADVEKLVSWLVAAAA 295 >UniRef50_B9JNL4 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JNL4_AGRRK Length = 342 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 70/301 (23%), Positives = 115/301 (38%), Gaps = 9/301 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPT 60 + P +L+A A R F RAA++L +T +AV Q+I+ LE+ GQPL RT + T Sbjct: 24 RLPPLTSLRAFVATARHLNFLRAAEELHVTSAAVGQQIRLLEDYLGQPLFHRTRGQLQLT 83 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 GQ L+ L + + ++V + WL+P L + +P Sbjct: 84 SAGQALVPGLTDAFDAVLGAMTQFAASDHEQPIRVSVAPSFASKWLIPRLDGLRRAAPGL 143 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY---- 176 L D + L G+ + A P +VD L + + + S FAE++ Sbjct: 144 QVLV--DASAQLTDLDSGDADCVIRYGSGAYPGLVVDHLFSEAVIPICSPEFAERHWLRN 201 Query: 177 FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 P + LL DH A+L+ S ++ S + A G Sbjct: 202 GPKAIEGVPLLHEDGAEHDHSCPDWNAWLRAEGLSYRLSQGGFRLSQSSLVIDAALAGQG 261 Query: 237 CCMIPHLQIEKELASGELIDLT-PGLFQRRMLYWHRFAPESRMMR-KVTDALLDYGHKVL 294 + E EL +G L+ ++ A ++R+MR + L K L Sbjct: 262 LGLGKVRLAEAELRAGRLVSPFGSPQPVSFSYFFATTATKARLMRVDLFRNWLQAEAKTL 321 Query: 295 R 295 + Sbjct: 322 Q 322 >UniRef50_A3Y684 Transcriptional Regulator, LysR family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y684_9GAMM Length = 302 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 58/300 (19%), Positives = 118/300 (39%), Gaps = 12/300 (4%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 K P ++L+ ++V R + F +AA +LC+T SAVS +IKQLE L R T Sbjct: 4 KLPSLKSLRVFESVARNKSFRKAADELCVTHSAVSHQIKQLEQELDVFLFQRNGRSINLT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-- 118 +QG+ L ++ E + ++ S L++ WL+P L A P Sbjct: 64 KQGEFLYPVINDSFDNIAEAVASLKSASKTKTLTIQTYVTFGTVWLIPKLNDFQAKYPDI 123 Query: 119 -IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 +R+++ D ++ + G + + +A L ++ V S + Sbjct: 124 RVRISISFVDVDFDKDDVDVG-----IIMGDKAWSHLDYTYLFDMEIFPVCSPKLVAE-- 176 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 L K ++ + D +L++ P +V++ +++ +G + Sbjct: 177 GKLNKPEDLAKLDLITVELAPDDWPTWLEKAGVDPHVIDSGPVVDNYLQALEMIYEGNSV 236 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 M +++L +G +I W+ P+ + + D+ + +R+D Sbjct: 237 VMARESFAKRDLETGRIIRPFDFSVMEVGS-WYSVHPKQQNPKPEIQLFNDWLAQKIRED 295 >UniRef50_Q5VM55 Putative LysR-type transcriptional regulator n=1 Tax=Marinomonas mediterranea RepID=Q5VM55_9GAMM Length = 288 Score = 173 bits (439), Expect = 6e-42, Method: Composition-based stats. Identities = 53/291 (18%), Positives = 100/291 (34%), Gaps = 9/291 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P L+A + R F AA +LC+TQ AVSQ+I+ LE+ G PL R T Sbjct: 6 LPPLNWLRAFEVSARHLNFTHAAAELCLTQGAVSQQIRLLEDHLGIPLFKRLPRGLSLTS 65 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 +GQ L +++ + + + + WL P L P Sbjct: 66 EGQSYLPVVQDAISRLAAATSELVNKDAHKPIKIHGSLSFFVHWLAPKLTDFKLRYP--- 122 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 N+ + T + + + P +V +L V + + Sbjct: 123 NIDIRYTTSLWVDEVDDDHELEIRWGNGDWPGLVVRRLTWDTLFPVCAPSLLDT----ID 178 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 T S L ++ ++ +L + V++ A +++A G + Sbjct: 179 TPSDLAAQTLLHTIGYEEGWGYWLSMVGEQTVDPAKGMQVDTLLAALRMAELGLGVALAR 238 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHK 292 E +A G+L++L ++ + + V + L++ K Sbjct: 239 SSMAEDLIAEGKLVELFDKRLNASESFYLVHKTGTELSDDV-NVFLEWLGK 288 >UniRef50_Q2BME1 Transcriptional regulator, LysR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BME1_9GAMM Length = 296 Score = 173 bits (439), Expect = 6e-42, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 114/296 (38%), Gaps = 9/296 (3%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQGQ 64 R LQ AV R F AAQ+ TQ VS RI LE G L +R R + +G Sbjct: 3 LRNLQTFVAVARLGSFHAAAQQQHTTQPGVSARINALEEELGVQLFIRDKSGTRLSPKGV 62 Query: 65 KLLALLRQVELLEEEWLGDE-QTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR-LN 122 +LL ++ + +E + + + + WL L P+ Sbjct: 63 QLLPYAEKMLAIGQEMKEQLSEEQQQKGNIRIGIADTLAHLWLTRLLEHWQQQHPLLSFE 122 Query: 123 LQVEDETRTQERLRRGEVVGAVSI-QHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 L + R ++L ++ A+ + Q + + + + L + +V++ + Sbjct: 123 LNTDVSQRLIQQLSDHQLDLALIVDQPLSDTALVSEPLCSYPQKWVAAPDLI--TGDSVK 180 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 L + P+++F D FLQ F H S + ++L +QG ++ Sbjct: 181 DIEDLARYPILSFPR-DTRPWEFLQSLFINRIEMPRFHTCGSVKGLLELTQQGLGIALLT 239 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 ++K++ASGEL++L + + + + + L D G + QD Sbjct: 240 APLVDKQIASGELVELDISPNPPGLNFSFSWRLDDNRILPKL--LADSGRGTISQD 293 >UniRef50_A3SQ37 Probable transcription regulator protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SQ37_9RHOB Length = 300 Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 114/293 (38%), Gaps = 10/293 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTE 61 P L++ +A R + F AA++L +TQ A+S+++++LE + G L R + T Sbjct: 7 LPSLPVLRSFEAAARHQSFTMAAEELGLTQGAISRQVRELEELIGARLFARVGRSVQLTP 66 Query: 62 QGQKLLALL-RQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G+ L + L + G +LS+AV + WL+P L A P Sbjct: 67 AGRGFARDLGGDLARLRQSVSRAVAAGDGGSILSVAVLPTFGSRWLMPRLPDFCARHP-- 124 Query: 121 LNLQVEDETRTQE-RLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 ++Q+ +R + L+ A+ P + L + V++ F E++ Sbjct: 125 -DIQLSFSSRGEPFDLQEARCDVAIHFGRADWPGAQLTPLCPENLRAVAAPAFIERH--G 181 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 + L +AP++ D F + + + + A QG + Sbjct: 182 IRQPADLCQAPLLQLSSRPDAWAGFFAAQAQDATRAGAGMLFDQFSLMISAALQGLGAAL 241 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHK 292 +P IE EL+ G L + + + +H P R+ + + + + Sbjct: 242 LPVYLIEDELSQGSLCAVA-AVGSPQEASYHIATPLGGTSRE-AASFVSWLRR 292 >UniRef50_A9CIB6 Transcriptional regulator, LysR family n=2 Tax=Agrobacterium tumefaciens RepID=A9CIB6_AGRT5 Length = 300 Score = 173 bits (438), Expect = 8e-42, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 108/293 (36%), Gaps = 8/293 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTE 61 P + LQA +A R R A+ +L +T AVS +I++LE G L R + T Sbjct: 5 LPSLKGLQAFEAAARYRSVTLASNELNVTPGAVSLQIRELEARLGVQLFFRKPRSIQLTR 64 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 +G++ LR + E + S +L+L+ WL+P L P + Sbjct: 65 EGERYYGALRTAFRMMREATAELTARSEITVLTLSCTPTFAVQWLMPRLPSFQQQHP-HV 123 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 ++++ R + R +V AV + L V + EKY P + Sbjct: 124 DVRISVTNRLVD-FSRDDVDLAVRHGFGRYEGLESIRFIDDSTLPVCAPQLLEKYGP--L 180 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 + LK+ + D + + +L+ + + S + A+ G + Sbjct: 181 REAGDLKSVPLLHDENRNEWRRWLEAAGASEVDASGGTVFIDSNGALDAAKAGHGIALTR 240 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLY---WHRFAPESRMMRKVTDALLDYGH 291 + +EL G LI + Y + R ++ + + D +L Sbjct: 241 RSLVSRELVEGALIAPFGTDMASTLAYFLVYPRRMLDNPDLVTLIDWMLSQAG 293 >UniRef50_A9AEG5 LysR family glycine cleavage system transcriptional activator n=69 Tax=Burkholderiaceae RepID=A9AEG5_BURM1 Length = 348 Score = 173 bits (438), Expect = 8e-42, Method: Composition-based stats. Identities = 50/297 (16%), Positives = 103/297 (34%), Gaps = 11/297 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P ++A +A R F RAA +L +T AVS +++ LE+ G L R T+ Sbjct: 6 LPALNAIRAFEAAARHENFSRAADELFVTHGAVSHQVRALEDELGVKLFTRNGKRLCLTD 65 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G + +R ++ + + L +++ + A ++ P + + P + Sbjct: 66 AGMRYAQQVRTALMMLADATRQVRASDRDRRLVVSMLSSFAARFVTPRIGTFIERHP-EI 124 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +++++ + R +V A+ + P V+ L + + P Sbjct: 125 DVELQSTNALTD-FARDDVDLAIRFGFGSYPGLYVEPLLDEAFFPACAPTLNGGKLPQ-- 181 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 T + L+ ++ D + F D + S +Q A +G ++ Sbjct: 182 TPADLVHYNLLRSDD-ELWRPWFDAAGLDTLTEPKRGILYQDSSNLLQAAIEGQGIALVR 240 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHR--FAPESRMMRKVTDALLDYGHKVLRQ 296 +L G L+ L WH P + A + + + Q Sbjct: 241 RSLALHDLLDGRLVRLFD---IDGPSPWHYFFVCPPPLLGTPRVQAFRTWILQEVAQ 294 >UniRef50_A1WKP4 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WKP4_VEREI Length = 318 Score = 173 bits (438), Expect = 8e-42, Method: Composition-based stats. Identities = 70/288 (24%), Positives = 108/288 (37%), Gaps = 11/288 (3%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQGQ 64 L++ +A R+ F AA +LC+TQ+A+S +I+ LE G L R R T G+ Sbjct: 15 LNALRSFEAAARQLSFTNAAHELCVTQAAISHQIRALEQSLGTQLFERRPRQVRLTVAGE 74 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IRLNL 123 +LLA+L E L L LAV + WL+P L + P I L+L Sbjct: 75 QLLAVLSDSFDGIERVLASLGNPQVS-TLQLAVTPTFSSKWLMPRLPRFIDRHPDIELHL 133 Query: 124 QVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTR 183 T + L RG+V AV + P +L V S P Sbjct: 134 H---HTAQADVLTRGQVDMAVIWTTRPPPRLWARRLFGTALTPVCSPALERPEHPLSQ-P 189 Query: 184 SALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHL 243 SA+ P++ D D + + + +++ S A + A G + Sbjct: 190 SAVCHYPLLHEDGPQDWQRWLTHVGLSVRA-TRRGLVIDDSNALLTAAMAGRGIALGRLA 248 Query: 244 QIEKELASGELIDLTPGLFQRRMLYWHRFAPE---SRMMRKVTDALLD 288 I +L SG L+ + YW P + + L+D Sbjct: 249 LIADDLRSGRLVRPFAQTIEAEGAYWLIAQPSMVAQPRFQSLAQFLMD 296 >UniRef50_Q5WIP7 LysR family transcriptional regulator n=2 Tax=Bacillus RepID=Q5WIP7_BACSK Length = 293 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 63/293 (21%), Positives = 114/293 (38%), Gaps = 10/293 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 + + +E+ F +AA L ITQ +VS IKQLE G L +R T Sbjct: 1 MTNLEHYRIFYTTAKEQNFSKAASSLFITQPSVSHAIKQLETQLGVSLFIRHSKGVFLTT 60 Query: 62 QGQKLLALLRQVELLEEEWLGDEQT--GSTPLLLSLAVNADSLATWLLPALAPVLADSP- 118 +G L + ++Q E Q+ +++A + +LLP + L P Sbjct: 61 EGNVLYSYIKQAFAHIETGERHLQSLKALESGSITIASSDSICKHYLLPRVPSFLKRWPK 120 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 + + Q ++L +G + + + + LF +S + + Sbjct: 121 LDIKFQHGSTPDIMKKLEQGRIDIGIVHLPINEKDVEITPFTSTTCLFCASPTY-KTLHN 179 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSV-PCHIVNSSEAFVQLARQGTTC 237 + + L + P+V+F ++FL++ F + P V S E ++ A+ G Sbjct: 180 GTHSLTELTRYPLVSFSAGSST-RSFLERLFQQQGQTFSPELEVGSIELLIECAKLGMGI 238 Query: 238 CMIPHLQIEKELASGELIDLTPG---LFQRRMLYWHRFAPESRMMRKVTDALL 287 + I+KEL GEL+++ + L + AP S R+ LL Sbjct: 239 GFVAKELIKKELEQGELVEIPVDIAIPTREIALITKKAAPLSIAARRFYSHLL 291 >UniRef50_C6P3G3 Transcriptional regulator, LysR family n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3G3_9PROT Length = 299 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 107/291 (36%), Gaps = 11/291 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 P L+ +A R R F RAA++L +T +AVSQ+IK LE+ G L R E Sbjct: 5 LPPLNALRFFEAAARHRSFIRAAEELHVTPAAVSQQIKLLEDHLGVALFNRGKTLVLNES 64 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 L L+ E + ++GS L+++ A WL+P L P + Sbjct: 65 AHDALHLVSDAFDQLERAMLRVRSGSIAGPLTISTPPVFAARWLIPRLNDFYLRYP-DVE 123 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 + + R + EV A+ P V++L + V++ A + T Sbjct: 124 VHLLATRRIVDFSME-EVDMAIRFSSDPHPGLSVERLMPEWIVAVATPELAA----SIKT 178 Query: 183 RSALLKAPVVAFD----HLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 + LL A ++ D + + ++ +Q A G Sbjct: 179 PADLLHADLIEDDWHIMRGTFPEWKTWLAGLGVVDAPLNVRRFGDADLAIQAAVNGLGVT 238 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDY 289 + H ++ +L SG L+ + G L + P ++ M A + Sbjct: 239 LAWHSLVQNDLGSGRLVQIL-GHNIASDLSYQLVMPRNKSMLNKVAAFRAW 288 >UniRef50_D1P1L2 Transcriptional regulator, LysR family n=3 Tax=Providencia RepID=D1P1L2_9ENTR Length = 297 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 64/299 (21%), Positives = 118/299 (39%), Gaps = 12/299 (4%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQG 63 + + + + V+ F +AA+ L +++S VS IKQLE LL R TE G Sbjct: 4 NLKQITSFLQVVDSGSFTKAAEILGLSRSMVSIDIKQLEQRLNVSLLTRNTRNIALTEVG 63 Query: 64 QKLLALLRQVELLEEEWLGDEQ--TGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 + ++++L EE Q + L + + ++LP L P +L Sbjct: 64 KHFYDDFKRIQLQIEEAFEKSQNLGLNITGTLRFSSTNEFGQRYILPLLPEFCRLYP-KL 122 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +LQ + + + ++ A+ + + S V KLG V++ FA +Y V Sbjct: 123 HLQYTFNSSLDDLISE-KLDIAIRLGNLKSSSLKVRKLGEYAIHLVATPQFARQY--PIV 179 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPC----HIVNSSEAFVQLARQGTTC 237 S L + P + L+ + QN +P + NS+E Q+A Sbjct: 180 QISDLAEIPWITHSLLNWQDTEYFLQNNSGEKFELPLINSQYSSNSAEVIHQMALASLGV 239 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 + P +E+++ LI L P + P + + T A +++ L++ Sbjct: 240 AICPDWLVEEDIKHNRLIRLLPEFSLPKRNI-QLLYPNTSNLPAKTRAFIEFLVGKLKE 297 >UniRef50_Q0F1H8 Transcriptional regulatory protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1H8_9PROT Length = 297 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 53/294 (18%), Positives = 105/294 (35%), Gaps = 7/294 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPT 60 + P L+A +A R AA++L +T SA+S +I+ LE G L VR T Sbjct: 6 RMPSLNALRAFEAAGRHLNLRAAAEELFVTPSALSHQIRGLEEQLGVKLFVRQRHGLELT 65 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 + G++LL L E + + P +L++++ + W +P L P Sbjct: 66 QSGKQLLPELTAGFSRLVEAVAALRPIHHPGILTVSMLSTFAMRWFIPRLHRFQQAFP-H 124 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + +++ + + G V A+ P +L + V S P Sbjct: 125 IEVRISTSIELVDFEQEG-VDCAIRSGQGDWPHTASLRLLDEQFAPVCSPSLITAERPL- 182 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + L + ++ + D + +L + + A +G ++ Sbjct: 183 ARPADLAEYTLLHSNQRPDDWRIWLSAEGLPELVGAQQLHFETRNFAIAAAVRGLGVAIV 242 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPE---SRMMRKVTDALLDYGH 291 L +++EL G LI R Y+ ++ + + L++ Sbjct: 243 DPLLVQEELKDGRLIQPFTHAVPTRSAYYLVWSERRKDTPELAAFRQWLVEEAA 296 >UniRef50_Q21FP2 LysR, substrate-binding n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21FP2_SACD2 Length = 298 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 65/299 (21%), Positives = 121/299 (40%), Gaps = 15/299 (5%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQGQ 64 ++A V++ F AA++L +++ VS+ + +LE G LL RT T +GQ Sbjct: 4 LTCMRAYCQVVKAGSFSAAARELNLSKVLVSRYVSELEADLGVRLLQRTTRKMSVTAEGQ 63 Query: 65 KLLAL----LRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLA-TWLLPALAPVLADSPI 119 L+ V LE+ +TG+ L LA ++ + L+P + P Sbjct: 64 AYFERSLVVLQDVTELEDAI--KNKTGAITGKLRLAAPTEAFSVEHLMPLIGEFAQAHP- 120 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 + +E R + + G A+ I S + KL + + +S + P Sbjct: 121 SVEFDIEMSDRYTDIVDEG-YDLAIRIGKLKDSSLVARKLADMQVILCASPQYIASNTPI 179 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 +V + L+ + F QQ + P ++N+S A L QG + Sbjct: 180 SAPEDLNTHTHIVDSNFLNGANWPFKQQETVVNIKPQPMFLINNSPAARALLLQGLGVGV 239 Query: 240 IPHLQIEKELASGELIDLTPGLFQR----RMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 P + ++L +GEL+ L P ++Y HR +++ DAL+++ + + Sbjct: 240 CPSFTVREQLQTGELVQLLPEWELSKGGIYVVYSHRKHLSAKVSG-FVDALVEHFSQRI 297 >UniRef50_A3D4V0 Putative uncharacterized protein n=1 Tax=Shewanella baltica OS155 RepID=A3D4V0_SHEB5 Length = 302 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 100/291 (34%), Gaps = 12/291 (4%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-P 59 ++ P L+A A+ R AA++L +TQSA+S +I+ +E+ L R Sbjct: 3 IRLPLLSALRAFTALARLGSINAAAEELSLTQSAISHQIRSIEDYLDVVLFNRDGRKMTL 62 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 T+ G+ +RQ P L ++V WLLP LA P Sbjct: 63 TDAGRVYAYQIRQALDDIGSATDKLSRKPKPNQLVVSVLPSFAQYWLLPRLAGFALQYPD 122 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 T + A+ H P + L L V+S F + P Sbjct: 123 FY--LTLSATMAFSNFNDDPIDCAIRFGHGDWPDLHCELLMGDSLLLVASPDFNQGQLPQ 180 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 V + +++AP++ H + +L S ++ AR G + Sbjct: 181 TV--AQVMQAPLL---HASESWAVWLSAAGVEQLRPKGKLEFTDSTHLLEAARLGLGIAL 235 Query: 240 IPHLQIEKELASGELIDLTP----GLFQRRMLYWHRFAPESRMMRKVTDAL 286 + + GEL+ +T L W ++ + ++T L Sbjct: 236 TRRSIAQTLIDRGELVRVTEIEPTHPSANYYLVWPHRVNQTPALLQLTAWL 286 >UniRef50_C1DBD5 Transcriptional regulator, LysR family n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DBD5_LARHH Length = 299 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 65/300 (21%), Positives = 108/300 (36%), Gaps = 12/300 (4%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP- 57 MKR P L A +AV R +AA +LC+T SAVS++I LE G LL R Sbjct: 1 MKRTCPSIHELLAFEAVSRHLSIAQAADELCVTPSAVSRQISGLERFVGIRLLARHGRRF 60 Query: 58 RPTEQGQKLLALLR-QVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLAD 116 T G+ L ++ + LE L LSLA WL+P L+ Sbjct: 61 TLTHAGRLYLQRIQPALLALENATLDLIDGPQGGGTLSLASVPTFTTKWLIPRLSDFSRL 120 Query: 117 SP-IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEK 175 P I L + + + +V A+ + P + + + +L V + Sbjct: 121 HPGITLAFHRHVSGKQAQPI---DVDAAIRYGNGVWPGVVSESITLRRFLLVGPPQGVDG 177 Query: 176 YFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGT 235 P + L + V+ + + Q P + ++ G Sbjct: 178 MAPPR-NPADLARQTVLQHQGEPSLWTEWAQIMQVPDLVPRPGPRFEHFGSLIRAVEAGM 236 Query: 236 TCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAP---ESRMMRKVTDALLDYGHK 292 ++P IE+EL G + + P ++ + P ES + +L+ G + Sbjct: 237 GYALVPVCLIEEELEQGRVAEPFPSAAILAQGHYLCYRPEQLESPVFEAFRSWILEEGAR 296 >UniRef50_C6C726 Transcriptional regulator, LysR family n=17 Tax=Gammaproteobacteria RepID=C6C726_DICDC Length = 335 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 110/296 (37%), Gaps = 8/296 (2%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQG 63 D+ +L AV+ F A ++L +++SAVS+R+ QLE G LL RT TE G Sbjct: 3 DFSSLPVFVAVVESGSFSAAGKRLNLSKSAVSKRLSQLEERLGVRLLHRTTRQLSLTEAG 62 Query: 64 QKLLALLRQVELLEEEW--LGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 ++ L ++ + L ++ + P L L P + Sbjct: 63 SDYYDYAQRALQLAQQAEDAVTQLQERPQGTLRVSAPMAFGLRHISPLLPIFLHRYP-EV 121 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 ++ + + R + + G AV I S + +L + ++ + ++ Sbjct: 122 SVDLLMDDRVVDLVGEG-FDLAVRIGQLPDSSLIARRLAPCFSVLCAAPDYLQR-TDVPQ 179 Query: 182 TRSALLKAPVVAFDH-LDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 AL + + + + +F + + + N+SEA G C + Sbjct: 180 HIDALKHHNCLFYLYFKGGVEWSFEGPDGPVRFQPHGNYRANNSEALFDALLAGVGICQV 239 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 P + L+ G L+++ P + + PE R + +D+ + L + Sbjct: 240 PKFIVGPALSEGRLVEVLPQYRLPEHSIYAVY-PERRHLPAKVRVFIDFLSQHLGE 294 >UniRef50_D1SS36 Transcriptional regulator, LysR family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SS36_9BURK Length = 318 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 65/293 (22%), Positives = 106/293 (36%), Gaps = 8/293 (2%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP- 57 M+R P L A + + F AA++LC+TQSA+S+ I LE GQ L +R Sbjct: 1 MRRLCPTISELNAFHSAAKHHAFTMAARELCVTQSAISRHIASLEEYLGQRLFIRKAGGL 60 Query: 58 RPTEQGQKLLALLR-QVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLAD 116 T+ G L R + LE G + L+ +V A WL P L Sbjct: 61 ELTDAGATYLNATRPAMAALESATAQLMSYGGSGGALNFSVPPTFAAQWLFPRLGHFKRT 120 Query: 117 SPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY 176 P ++ L + E A+ + PS L + V S + Sbjct: 121 LP-QVALNFVRYQHAHDFAVPHEFDAAIQYGYGNWPSANARYLIGKETSIVCSPQLRDTL 179 Query: 177 FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 T L A ++ + +++ + GS N ++ A G Sbjct: 180 --RLRTPQDLQHATLLQHIEVPLAWHDWMEAHQCDTAGSRFGPGFNLYSLIIRAAVSGFG 237 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDY 289 ++P +E EL +G L++ G L ++ AP +R V + + Sbjct: 238 VGIVPTCLVEDELQAGSLVEPL-GRRFESPLGYYLCAPTARTNLSVYKLVAAW 289 >UniRef50_C9P538 Transcriptional regulator n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P538_VIBME Length = 305 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 65/295 (22%), Positives = 109/295 (36%), Gaps = 8/295 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTE 61 P L+A +A R F +AA +L +TQ+AVSQ++K LE+ L +R R T+ Sbjct: 4 LPPLNALRAFEASARLGSFTKAADELNVTQAAVSQQVKILEHHLKATLFIREAKGIRLTD 63 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IR 120 GQ +L QV D LSL V+ +L L L D P R Sbjct: 64 AGQSYQPVLSQVFHSLRIGTEDLFGERGNNTLSLRVSNTFAEHFLAARLPNFLKDYPRFR 123 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + L +++ +R + + + V++L +Y V +P A ++ N Sbjct: 124 VRLYTSPWSQSDQRSQP---DIEIYNGYGDWDGRQVERL-THEYWQVVCRPQAINHYGNV 179 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 LL P A + + Q PC +++ +Q R G + Sbjct: 180 TCAKQLLDWPRAAIIGYRETWLDWFSQQGITEIADAPCLEFDTTTLAIQAVRHGDIALLT 239 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 + + LA G L+ P ++ + R A D+ + + Sbjct: 240 RNFVVADPLAKGSLVLAHPASMTTTGGHYLVWKKGDH--RPKVLAFCDWIRREVA 292 >UniRef50_B5WPF6 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=B5WPF6_9BURK Length = 307 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 105/297 (35%), Gaps = 4/297 (1%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTE 61 P +L+A +A R F RAAQ+L +TQSAVS +I++LE G L R T+ Sbjct: 7 LPPLLSLRAFEAAARHLSFGRAAQELFVTQSAVSHQIQKLEADLGVALFERRTRAIELTD 66 Query: 62 QGQKLLALLRQVELLEEEWLGDEQT-GSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 QG+ A + L + + + +LS+ + + + WL L P Sbjct: 67 QGRAYYAKVHAAFELLRLGTSEVRAFSTERTMLSVGLLSSFASRWLASRLHTFPLTHP-D 125 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + LQ+ + + + GEV A+ P KL + V S Sbjct: 126 IELQLRPDIALAD-VPGGEVDVAIRYGRGGWPGVASQKLMSERLSPVCSPSLITGKKRPR 184 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + LL+ P++ + + G ++ V+ A G M Sbjct: 185 KPQDLLLRFPLLTSYSTQPFEWEAWAHHAGVILGEAQRVQLHDYNIVVEAALAGQGVAMG 244 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 H I ++LA G L+ P + A + + +QD Sbjct: 245 RHRLIAQQLAQGSLVQALPETMLDDPRIGWWLVTRKGTLDAAAAAFCSWIMQTAQQD 301 >UniRef50_B7QWK5 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. R11 RepID=B7QWK5_9RHOB Length = 299 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 107/299 (35%), Gaps = 14/299 (4%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPT 60 K P L A +A R F RAA+ L + Q AV++ I +LE+ G PL +R R T Sbjct: 5 KLPPMNALVAFEAAARHGSFTRAAEDLSVAQPAVTRHIARLEDWIGAPLFLRRGNQIRLT 64 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 +G+ L L V E L D L + + WL+P + + A + + Sbjct: 65 AEGETLAELATSVLDRLEVGLQDV-APVNDQELRIGASFGVTHLWLMPRIGAMRAAANVT 123 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 +N D+ R+ + ++ + D L V+S F + Sbjct: 124 INFITSDDYRS---FDDRAIDCSIRFGNGDFGDNAADLLFLETCQIVASPEFLANHPTFD 180 Query: 181 VTRSALLKAPVVAFDHLDD------MHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQG 234 R P + FDH D F ++ P V S + + + G Sbjct: 181 PDRPIATLDPALLFDHGDPHLNGWITWARFYEREGQSLPSGQRLRTVLSYPSMLDMICAG 240 Query: 235 TTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPE---SRMMRKVTDALLDYG 290 + ++ + G L+ + P L + Y+ + P+ +++ L+ Sbjct: 241 EGIGLGYWGLEDQMVQDGRLVRVGPALSRPHYGYYLVYRPDMTGKPAFQRLRTYLMGAA 299 >UniRef50_B5WKQ0 Transcriptional regulator, LysR family n=5 Tax=Proteobacteria RepID=B5WKQ0_9BURK Length = 302 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 114/297 (38%), Gaps = 6/297 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPT 60 + P +TL+A +A R AA++L +T AVS+ IK LEN G PL R T T Sbjct: 4 RLPPLQTLRAFEATARLLSMTLAAEELHVTHGAVSRHIKTLENHLGVPLFRRLTRRIVLT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 + G + + ++ + ++++ + + WL P L A P Sbjct: 64 DAGAEFHFAVARLLGELTREAESLRGHDNIASMTISTSVSFASKWLAPRLHRFKAIHP-E 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L++ ++ R + L G+V AV P +++ V S + E+ Sbjct: 123 LDVHLDVTDRNVD-LDDGQVDAAVRYGGGRYPRVQSERILEETVTPVCSPSYREE-VGGL 180 Query: 181 VTRSALLKAPVVAFDH-LDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 + L + ++ D L + Q F + D S + S A ++ A +G + Sbjct: 181 TNPAGLARCTLLHEDRMLANWEQWFAYADLDRSRRSRGPAYSHGSMA-IEAAIRGEGVAL 239 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 + ++A+G L+ P + + + AL D+ +R+ Sbjct: 240 GRSALVGDDIAAGRLVAPFPDIRLKVERGYDLVYRTGNRDHPKVCALRDWLAAEVRR 296 >UniRef50_A8TRJ4 Transcriptional regulator, LysR family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TRJ4_9PROT Length = 301 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 59/289 (20%), Positives = 102/289 (35%), Gaps = 5/289 (1%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P LQA +A R A+++L +T SAVS R++ LE G L R T+ Sbjct: 6 LPPLSALQAFEATARRLSVRDASEELRVTPSAVSHRLRNLETAIGVKLFHRLNRQLILTD 65 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G L+ + + + L+L WLLP L+ L+ P + Sbjct: 66 AGSVYLSRVAPAFDALRSATSEIAERGSADTLTLTAPPSFAEIWLLPRLSRFLSAHP-DI 124 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +L+VE +R + R V ++ P + KL + V + + + Sbjct: 125 DLRVEASSRAVD-FSREPVDASIRYGRGDWPGLVARKLVEEQLVAVCAPSLQTGTY-DVT 182 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 L + ++ D A+L+ + + S ++ A G + Sbjct: 183 EPGDLARHTLIHSDQRLTSWTAWLRSHGHGTVKGDRNLRFSQSAHSLRAAADGLGVALES 242 Query: 242 HLQIEKELASGELIDLTPGL-FQRRMLYWHRFAPESRMMRKVTDALLDY 289 + L +G L++ P L +H P R M AL + Sbjct: 243 RIMAAAYLDAGTLVEPFPDLAPADDGAAYHLVVPPDRSMLPKVRALDSW 291 >UniRef50_B2U8C9 Transcriptional regulator, LysR family n=27 Tax=Proteobacteria RepID=B2U8C9_RALPJ Length = 311 Score = 170 bits (431), Expect = 4e-41, Method: Composition-based stats. Identities = 54/292 (18%), Positives = 96/292 (32%), Gaps = 6/292 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPT 60 K P L+A ++ R F RA +L +T A+S++++ LE G L R T Sbjct: 3 KLPPLNALRAFESAARHLSFTRAGDELNVTHGAISRQVQALEAWLGVSLFRRLNRRVELT 62 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 + GQ+ L+ + + +L + WL+P L+ P R Sbjct: 63 DAGQRYLSEIGVALDRISTSSQALRDRDAARILRVNSIPTFTMRWLIPRLSTFQMRFP-R 121 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + +++ E L + + + V S E+ Sbjct: 122 VEVRLTTSIEEIEDL-PDHFDVIIRGGPEIHAGFRSGRFLDESRFPVCSPVLLERL--PL 178 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 T S L ++ D L + ++L +Q A G M Sbjct: 179 STPSELRHHTLLHSDTLPSVWPSWLVLAGVPNLRPAHALTFEHFYLSIQAAIDGLGVAMG 238 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHK 292 P I +L G L+ P L Y+ ++P + +V A + + Sbjct: 239 PSALITDDLEEGRLVAPFPNLALGARSYY-WYSPARNLGDEVVQAFCAWLGE 289 >UniRef50_A4XWR7 Transcriptional regulator, LysR family n=57 Tax=Proteobacteria RepID=A4XWR7_PSEMY Length = 304 Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 116/299 (38%), Gaps = 12/299 (4%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRP 59 M R + L AV F AA++L ++ S VS+++ +LE L R T Sbjct: 1 MNR--WEGLDEFVAVAECGQFSAAAERLGLSTSQVSRQVARLEERLQSRLFYRSTRRVAL 58 Query: 60 TEQGQKLLALLRQVELLEEEWLGD--EQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 TE GQ L ++++ EE L + LL + +++P + +A Sbjct: 59 TEAGQLFLQHCQRLQDAREEALRAVGDLGAEPKGLLRMTCAVAYGERFIVPLVNDFMARH 118 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 P +L +++E R + L G + A+ + + +L + ++ + ++Y Sbjct: 119 P-QLRVEIELSNRQLDLLHEG-LDLAIRLGRLQDSRLMAARLAPREMYLCAAPEYLQRY- 175 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 + S L + + H +F+ + NS +A + A +G Sbjct: 176 GRPHSLSELARHNCLIGSSD---HWSFVDNGRETQMRVQGNWRCNSGQAVLDAALRGFGL 232 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 C +P + + LASG L+ L W + P+ R + L+D+ L + Sbjct: 233 CQLPDYYVLEHLASGALVSLLQQHRPPNTAVWALY-PQQRHLSPKVRQLVDHLKAGLSE 290 >UniRef50_UPI000190906C chromosome replication initiation inhibitor protein n=1 Tax=Rhizobium etli CIAT 894 RepID=UPI000190906C Length = 293 Score = 170 bits (430), Expect = 6e-41, Method: Composition-based stats. Identities = 65/249 (26%), Positives = 110/249 (44%), Gaps = 7/249 (2%) Query: 52 VRTVPPRPTEQGQKLLALLRQVELLEEEW------LGDEQTGSTPLLLSLAVNADSLATW 105 R+ P + G + + V LLE + L + L + +A NADSL TW Sbjct: 44 ERSAAYTPHDCGGWVCRHVENVGLLERDLYEHLPSLAPSRELIERLTVHVATNADSLGTW 103 Query: 106 LLPALAPVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYL 165 + AL+ S +++ ++DE T E L+RG V+ A++ + + C LG++ Y Sbjct: 104 FMTALSTYARMSNNLIDVVIDDENHTSEWLQRGRVIAALTGIEKQVQGCRRIALGSMRYR 163 Query: 166 FVSSKPFAEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSE 225 +S F +++F GV L AP + F+ D + ++ Q F + P H + S++ Sbjct: 164 ATASPEFVKRHFSAGVNSETLRTAPALTFNQKDKLQNRWIAQLFR-DDVACPTHFLPSTQ 222 Query: 226 AFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDA 285 AFV + G M P I L +G L++L P L+W + +TD Sbjct: 223 AFVDASIAGMGWGMNPEYLIRHHLQAGALVELIPDQPLDVSLFWQVNKLAADRFAILTDL 282 Query: 286 LLDYGHKVL 294 + + L Sbjct: 283 VSHAAEQHL 291 >UniRef50_D2BWA2 Transcriptional regulator, LysR family n=1 Tax=Dickeya dadantii Ech586 RepID=D2BWA2_DICD5 Length = 289 Score = 170 bits (430), Expect = 7e-41, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 116/294 (39%), Gaps = 12/294 (4%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRPTEQG 63 D+ T + AV+ F A+ ++ + S +S++I QLE LL R+ +PTE+G Sbjct: 2 DFNTTKWFIAVVNAGSFSVASDRMGVPISTLSRKINQLEQELNVQLLERSRHGVKPTEKG 61 Query: 64 QKLLALLR-QVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 QK R VELLE+ + L L+V + W L L P + Sbjct: 62 QKFFEQARLGVELLEDAQKSVISAHTLQGKLRLSVPPNFSIWWNL--LIAFQQRYP-DIT 118 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 + R + G + A+ + + + + + ++ LFV+S +Y T Sbjct: 119 VFCHSSERVVDLFEDG-IDVALRMGNLNTDNVIAKPVMTVEALFVASPALLARYGTPQ-T 176 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 + + P+ A++ L H +F P N+ + + A G + Sbjct: 177 LEEMARLPIAAWESL--HHGSFEWGRGSGKVKYEPAFSSNNIQGLIHYALSGMGVAQVLD 234 Query: 243 LQIEKELASGELIDLTPGLF---QRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 + L S ELI L PG+ L + R S ++R D L++ K+ Sbjct: 235 FSVRPWLESSELIRLLPGITMQSLPLHLVYARHKHPSALVRAYLDFCLEWVGKL 288 >UniRef50_A3JF22 Putative LysR-family transcriptional regulator n=1 Tax=Marinobacter sp. ELB17 RepID=A3JF22_9ALTE Length = 294 Score = 170 bits (430), Expect = 7e-41, Method: Composition-based stats. Identities = 63/293 (21%), Positives = 115/293 (39%), Gaps = 8/293 (2%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQG 63 + + L+ + + F AA+KL +Q A+S RI LE+ G L R+ T +G Sbjct: 2 NIKALETFFWISKLGSFRAAAKKLYASQPAISARISGLEDELGIELFDRSGRNVVLTSKG 61 Query: 64 QKLLALLRQVELLEEEWLGDEQTGST-PLLLSLAVNADSLATWLLPALAPVLADSP-IRL 121 ++ L ++ L E L + T + L TWL + + P I L Sbjct: 62 RQALFYTEKILQLHAELLEAVASSDTIKGSIRLGAAETIAYTWLPELIERINETYPAINL 121 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 L ++ E+L + E+ A I ++V S P V Sbjct: 122 ELDIDISVNLAEKLIKREIDIAFLIGEVKQEGFFCTPFYNYPLIWVVSPKLTLP--PEPV 179 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 + L K P++ + + + H ++ + S H +S +++A G +P Sbjct: 180 SLFDLAKLPIITYPRMSEPH-VNIRALVNEMSNSAQIHSSSSLSTIIRMALDGIGVSALP 238 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLY--WHRFAPESRMMRKVTDALLDYGHK 292 I++ELASG+L + +++ + AP + ++R V D L + Sbjct: 239 KEIIKRELASGQLREFQVEASIPNLIFNMAYCAAPGANVVRAVADLSLKIVTQ 291 >UniRef50_A3SJ26 Transcriptional regulator, LysR family protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SJ26_9RHOB Length = 295 Score = 169 bits (429), Expect = 8e-41, Method: Composition-based stats. Identities = 60/269 (22%), Positives = 103/269 (38%), Gaps = 11/269 (4%) Query: 8 TLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQGQKL 66 L + +AV R F AA +LC+TQSAVS++I+ LE G+ L +R T++G+ L Sbjct: 3 QLHSFEAVARRMSFTAAADELCLTQSAVSRQIRALEEDLGRALFLRKHRAIELTQEGRDL 62 Query: 67 LALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVE 126 + + + + S +++A + L+P L P ++L++ Sbjct: 63 FEAVTRGLDEIALAVNGLRRASDTPQITVATSVAFSYYCLMPRLERFADRYP-EIDLRIL 121 Query: 127 DETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSAL 186 + + L + + AV P +L V S + + + P S L Sbjct: 122 ATDQLVD-LGKDDADVAVLFGDGNWPGVEARRLFGERVYPVCSAGYLQNH-PELRRPSDL 179 Query: 187 LKAPVVAFDHLD------DMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 L ++ D D H +QQ P +NS +Q A G + Sbjct: 180 LDQTLLHLDGGGTIWGAVDWHAWLVQQGVTGQP-VRRGIRLNSYPMVLQGAEAGRGVALG 238 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYW 269 + LASG+L+ L Y+ Sbjct: 239 WSYITDAMLASGQLVCLFDTPLVTSCSYY 267 >UniRef50_A0B3J6 Transcriptional regulator, LysR family n=33 Tax=Burkholderia RepID=A0B3J6_BURCH Length = 298 Score = 169 bits (429), Expect = 8e-41, Method: Composition-based stats. Identities = 68/300 (22%), Positives = 118/300 (39%), Gaps = 17/300 (5%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQ 62 P+ L A + F AA++L +T SAVS++I LE +FG L VR T Sbjct: 6 PNVAELHAFATSAKYLNFSYAARELGLTPSAVSRQIANLEALFGVKLFVREGRGLALTRA 65 Query: 63 GQKLLAL----LRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 GQ A LR++ E L + LL++A WLLP L LA +P Sbjct: 66 GQVYHARVVGPLREIGNASIELLSARENSD---LLTIASVPTFTTKWLLPRLTRFLAAAP 122 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 + L + G + A+ D LG ++ V S+ FA+++ Sbjct: 123 -GVTLSFRRHLAPGDVFPFG-LDAAIRYGDGGWEGVRSDYLGGRTFVPVCSREFADRHAL 180 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 + + AP + + + A+ +++ ++ +Q A+ G Sbjct: 181 H--VPADAAAAPRLVHEQAEIAWSAWAERHRATQMNALAGPRFEQYSVLIQAAQAGLGIA 238 Query: 239 MIPHLQIEKELASGELIDLTPGLFQ-RRMLYWHRFAPE----SRMMRKVTDALLDYGHKV 293 ++P I LA+G L++ ++ +APE S +R+ + +LD + Sbjct: 239 LVPRFLILDNLAAGTLVEPFDAPVDVDAQGHYLCYAPERLDTSDALRRFREWMLDEAARA 298 >UniRef50_Q391C1 Transcriptional regulator, LysR family n=5 Tax=Burkholderia RepID=Q391C1_BURS3 Length = 312 Score = 169 bits (429), Expect = 8e-41, Method: Composition-based stats. Identities = 64/298 (21%), Positives = 109/298 (36%), Gaps = 11/298 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTE 61 P L+A + R F RAA+ L +TQSAVS++++QLE G+ LL R T Sbjct: 1 MPALNALKAFEMAGRTGSFTRAAELLNVTQSAVSRQVRQLEGQLGETLLERRHHQLELTA 60 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G+ LL L+Q E + Q + L V A WL+P L + P Sbjct: 61 AGRVLLRALQQSFDKIELTVRSLQEKTHLNRLRANVPPTFAARWLMPRLGRLRDAHP--- 117 Query: 122 NLQVEDETRTQERLRRGEV-VGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY---- 176 ++ TR + L V A+ L ++ V + + Sbjct: 118 EFELSLTTRIHDSLGESRVLDCAIRFGDGEWDGFDNALLMQEQHIAVCAPALYARLRQDG 177 Query: 177 FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 P + R LL + D Q +L+ + + + + ++ A G Sbjct: 178 APIDLNRFTLLHV-LATDDQRYLTWQHWLKAAGIADVDTRGGYEFDLLDHAIRAAIDGLG 236 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 + + +ELA+G+L+ + YW PE + + D+ + + Sbjct: 237 ITIADRHMVARELATGQLMQVLNVHVDGHQSYWFVTRPEQTNLPHIVQ-FRDWLQQEV 293 >UniRef50_D2T424 Carbapenem-hydrolyzing beta-lactamase transcriptional activator n=2 Tax=Erwinia pyrifoliae RepID=D2T424_ERWPY Length = 292 Score = 169 bits (429), Expect = 8e-41, Method: Composition-based stats. Identities = 69/271 (25%), Positives = 107/271 (39%), Gaps = 13/271 (4%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPT 60 P R L + F RAAQ L +T SAVS +IKQLE G+PL +R + T Sbjct: 4 NLPSLRALHYFHQAALRQSFSRAAQSLNVTHSAVSHQIKQLEEWLGKPLFLRIKGRVQLT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-I 119 G++L A Q E D+ L+++ LA WL+P + + I Sbjct: 64 ADGERLKACCMQSFRSI-EVTCDKIRACDLHSLTISCAPSFLAQWLIPRINRFTSRHSEI 122 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYL-FVSSKPFAEKYFP 178 L Q + ER+R + Q Q + + L +DY+ V S F+ + F Sbjct: 123 ALTFQTHVD---LERVRSEHTDILIVSQQQPVQKDIAATLITVDYIGPVCSPAFSSR-FS 178 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 S L P++ D + + ++ H ++ +Q AR G Sbjct: 179 YETDFSTL---PLLHADTKLNAWSEWAKKTGARGDFWAGNH-FDNLTLAIQAARNGMGII 234 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYW 269 M P + ++KE+ G LI G + W Sbjct: 235 MTPQILVKKEIFDGSLIAPL-GFAEVDRATW 264 >UniRef50_B1J9I9 Transcriptional regulator, LysR family n=15 Tax=Proteobacteria RepID=B1J9I9_PSEPW Length = 321 Score = 169 bits (429), Expect = 9e-41, Method: Composition-based stats. Identities = 69/302 (22%), Positives = 100/302 (33%), Gaps = 15/302 (4%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQGQ 64 + L R F R A++L IT AVSQ+++QLE G L +R + +GQ Sbjct: 10 FVWLHVFSCAARHLSFTRCAEELHITPGAVSQQMRQLEERLGYRLFLRRARGVELSAEGQ 69 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IRLNL 123 +L + + E L G L + LA WL P L P I L L Sbjct: 70 RLAQTVAEAYGSIEAELLRLDAGEIRGTLRVRSIPSFLAKWLTPRLPRFQQRYPDIELRL 129 Query: 124 QVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTR 183 ED + L G+ A+ + + P L L V S + P Sbjct: 130 VAEDS---AQALNPGDFDLAIDLNDGSYPGMLSTPLLDEQIFPVCSPALL-RGRPPLHGP 185 Query: 184 SALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPC------HIVNSSEAFVQLARQGTTC 237 + L P++ F + F L P H N + ++ A G Sbjct: 186 ADLAHYPLLHDITAWRGSSDFAEWEFYLEGIGAPRLDVRRGHTFNRNHLTIEAAIAGIGV 245 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPES---RMMRKVTDALLDYGHKVL 294 + + EL G LI Y + P R V D L++ L Sbjct: 246 AIARRTLLNDELERGALIVPFGVPIANHKRYVVHYPPGGLNQPGARAVHDWLVEEAKSFL 305 Query: 295 RQ 296 Q Sbjct: 306 MQ 307 >UniRef50_C4LCQ0 Transcriptional regulator, LysR family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LCQ0_TOLAT Length = 300 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 106/296 (35%), Gaps = 11/296 (3%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQGQ 64 L + R F+ AA +LC+T SA+S RI+QLE G L +R T TE G Sbjct: 7 LTLLSTFEVAARYLSFKLAADELCLTPSAISHRIQQLEKQLGFRLFLRMTRKLVLTEDGN 66 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQ 124 +LL L + ++ + D + L+L + WL+P L P LN+ Sbjct: 67 RLLRTLTKSLRRIDDEIEDIRYNDLRGTLTLGIAPILGQLWLMPRLPDFQQRWP-SLNVM 125 Query: 125 VEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRS 184 + T + A+ P + L L V S +A + Sbjct: 126 LRVRAGTVN-FDEEHIDLAIYYGATHYPDLYRELLFEEQLLPVCSPAYAAQ-LGLSENPD 183 Query: 185 ALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHI------VNSSEAFVQLARQGTTCC 238 L +A + D+ F + ++ + N+ +Q A G Sbjct: 184 RLSEACFLHASESTDVQNLFSEWRIWCEASNISLPLEERYYGFNNYTLALQAALNGMGIL 243 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 M ++ I+ L SG+L+ G + F PE R A D+ + + Sbjct: 244 MGRYILIKPMLESGQLVSPC-GPMIPAGRNYELFYPEENAQRPRLKAFTDWMKEQI 298 >UniRef50_Q11LB7 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11LB7_MESSB Length = 311 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 66/294 (22%), Positives = 118/294 (40%), Gaps = 10/294 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTE 61 R + R L+ V R R F AA++L TQ+A+S RI+ LE G LL R T Sbjct: 14 RMNTRFLETFVWVARLRSFSAAAERLNSTQAAISNRIRALEAELGVKLLDRNSRSVTLTR 73 Query: 62 QGQKLLALLRQVELLEEEW-LGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI- 119 +G+ A +++ L + L + +S+ + + TW P A ++ ++ Sbjct: 74 EGRVAFAKAQRIVNLASAFVLDVSHPDAIQGSVSIGIIDTIIHTWF-PDFAKLMREAFPM 132 Query: 120 -RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 +L+L V+ + ++L+ GE+ A + A +LG D ++V S A ++ Sbjct: 133 LKLSLTVDATPKLYQQLQHGELDLAFGVGSAASDGFYAVELGTFDCVWVGSP--ASRFSS 190 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLP-PGSVPCHIVNSSEAFVQLARQGTTC 237 + + + P+V++ Q+ P NS + L R+G Sbjct: 191 PPTSIADIEDCPIVSYSVGSVPDQSLRALLGRHAIPLENRVFNTNSLPTIIHLVREGVGI 250 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGH 291 +P I ++S ELI L G M Y +A + + + Sbjct: 251 AYLPECIIRPLISSKELILLPIGEKLAPMTYHAIYA--GHHEDPLPERVAAIAR 302 >UniRef50_A6D585 Transcriptional regulator n=5 Tax=Vibrionales RepID=A6D585_9VIBR Length = 298 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 64/292 (21%), Positives = 111/292 (38%), Gaps = 9/292 (3%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQGQ 64 L + R F AAQ+L +TQ VSQRIK+LE + L +R T T +GQ Sbjct: 11 LSLLHTFNVAARHLSFTHAAQELFLTQGGVSQRIKKLETLLNFNLFIRKTRKLELTPEGQ 70 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQ 124 ++ ++L L D QTG L +A + ++WL+P L P NL Sbjct: 71 RVFSILNTSFESIFSELSDIQTGELTGELYIATSPYFASSWLMPRLPDFRHQYP---NLS 127 Query: 125 VEDETRTQERLRRGE-VVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTR 183 ++ +T+ + + E A+ P+ +L A + V S +AEK+ + Sbjct: 128 IKLDTKQNQSEFQFEPYDAAIFYSEGLYPNHFSRRLFAGQRIPVCSPEYAEKH-QLHLND 186 Query: 184 SALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHL 243 + L + + + D+ V C + + + A+ + Sbjct: 187 ARLKEVRFIHNSDSVAWQHWLNEMQLDINC-QVKCDYYSDNRIAIDAAQLSLGVALGRKE 245 Query: 244 QIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 I + G+L+ P + P+ R AL ++ + LR Sbjct: 246 FIAPLIKQGKLV--APFASVESGKGYDLVCPKGMEQRAKFQALSNWLTEQLR 295 >UniRef50_B5J5W4 LysR substrate binding domain protein n=2 Tax=Alphaproteobacteria RepID=B5J5W4_9RHOB Length = 328 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 63/296 (21%), Positives = 101/296 (34%), Gaps = 13/296 (4%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P + L ALDAV+R R AA +L +TQS VS+ I LE+ G L R P Sbjct: 32 LPSIKLLMALDAVVRHRSVTVAAAELNLTQSTVSRLILSLEDQLGVELFTRERRRLIPNT 91 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 + + + ++ LSLAV WL P L L P Sbjct: 92 AALSYQRDIARALNIVQQASMSVVANPLGGTLSLAVLPTFATRWLGPRLGQFLNAHP--- 148 Query: 122 NLQVEDETRTQERLRRGE-VVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + V TR GE A+ +L + FA+K+ Sbjct: 149 GIAVNVSTRIGHLDFAGETFDAAIYYGLGDWDGVNHLRLFDETVTACVAPGFAQKH--PI 206 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 L P++ + + + + + P + +++ +Q A G ++ Sbjct: 207 RRLEDLAGLPMLQLESRPSVWSDWFEGQGGV-PYATGGMLMDQYSMMIQSAISGLGIALL 265 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 P + E+ G L+ + R YW + KV A L + L + Sbjct: 266 PDYLAQIEIFEGRLVPVLERNVPVRGAYWLVW-----PNDKVEHAPLKTFREWLGE 316 >UniRef50_A8TZX1 Fumarate hydratase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TZX1_9PROT Length = 305 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 62/295 (21%), Positives = 104/295 (35%), Gaps = 10/295 (3%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RP 59 M+ P L+A +A R RAA++L +T SAV +I+ LE G+PLL R P Sbjct: 1 MRLPSLNALRAFEAAARLGSLTRAAEELHVTPSAVRHQIRALEEEIGRPLLRRNGSGLMP 60 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 TE L LR+ + + +T L+++ ++ WL+P L P Sbjct: 61 TEAANGSLGHLRRAFDALADANRSLRHPATAPTLTVSAVPSFVSAWLIPRLEGFQRRFP- 119 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF-- 177 + +Q+ + R G V A+ P +L + Y V + + Sbjct: 120 GVTVQIGTNALPTDFHREG-VDLAIRYGLGGYPGLFECRLFSERYFPVCAPYLLDGPTPL 178 Query: 178 --PNGVTRSALLKAPVVAFDHLDDMHQAFLQQN-FDLPPGSVPCHIVNSSEAFVQLARQG 234 P + R LL + V+ H S A+ Q A Sbjct: 179 AEPGDLARHTLLHSSVLPRSGWPVWRDWLDAAGVLAQVDPDAGTHYTMSMFAY-QAAMAC 237 Query: 235 TTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDY 289 + + LA+G L+ + +H P R + A +++ Sbjct: 238 QGVALGTTVLSMDMLAAGYLVKPF-DMELPTAFGYHIVCPPESRERPLVAAFIEW 291 >UniRef50_C9NUL4 D-serine dehydratase transcriptional activator n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NUL4_9VIBR Length = 313 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 106/297 (35%), Gaps = 11/297 (3%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQGQ 64 L + R F AA +LC+T SAVS +I +LEN L R T G+ Sbjct: 18 LSKLYTFEVAARLGSFALAAHELCLTPSAVSHQISKLENELKLQLFERQHRKVTLTADGE 77 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQ 124 +L + + ++G L++ WL P L P ++++ Sbjct: 78 QLFTSVTLALSQLNSSIEQVKSGHISGGLTIYARPSFAHDWLAPRLHDFCEQYP-SIDIK 136 Query: 125 VEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRS 184 + T + R G + A+ + + KL + V S +A +Y N TR Sbjct: 137 LITGNDTLDLNRHG-IDLAIYYSNVTPDASWSLKLNEEHVIPVCSPHYANQYALNDETRD 195 Query: 185 ALLKAPVVAFDH------LDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 L ++ + D + + + + + + S V A+ G Sbjct: 196 -LSHCTLLHDNQAWHIHSQLDEWKYWHEHYAEFDIQNCRSVGFDQSTLAVSAAKHGAGIA 254 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 M +++++ G+L+ P + Y++ + R + D+ + L+ Sbjct: 255 MGRWSLVKEDIERGDLVMPFPNRLIKSGYYYYLIGVQ-RTISAKQKCFADWISRQLQ 310 >UniRef50_Q161D2 Transcriptional regulator, LysR family, putative n=6 Tax=Rhodobacterales RepID=Q161D2_ROSDO Length = 295 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 101/294 (34%), Gaps = 12/294 (4%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P L +AV R AA +L +TQSAVS++IK LE G L R T Sbjct: 8 LPSITALTCFEAVARLGSATDAAAELSLTQSAVSRQIKALEGQLGITLFERRGRQLILTS 67 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 +G ++ +R + +T + L+L++ WL P L P Sbjct: 68 RGAAYVSDIRDILQRLTRASVAVRTDARAGALNLSILPAFGMHWLAPRLQDFAQTHP--- 124 Query: 122 NLQVEDETRTQE-RLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + V TR R + A+ + P+ L + V + + Sbjct: 125 EVTVNLSTRLAPFDFRDTQFDAAIHFGREDWPAADYLPLMPETVVAVCAPSLIPTPLSD- 183 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 +L ++ + +L+ + D+ P + + Q A G ++ Sbjct: 184 --ARGILSHDLMHLETRPRGWVRWLR-SLDIDASLPPGMVFDQFSTMAQAAVHGLGVALL 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRF---APESRMMRKVTDALLDYGH 291 P + L SG+L+ +P Q Y+ + ES + L D Sbjct: 241 PTFVADPFLNSGQLVLASPHANQSIGSYYLVWPKDREESHSLTSFRTWLRDQAR 294 >UniRef50_B9TIZ9 Chromosome initiation inhibitor, putative n=1 Tax=Ricinus communis RepID=B9TIZ9_RICCO Length = 181 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 57/181 (31%), Positives = 94/181 (51%), Gaps = 1/181 (0%) Query: 114 LADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFA 173 + D L+++++D+ T LR G VVG V+ + +P LG + Y V++ FA Sbjct: 1 MRDGDCMLHIRLDDQDHTLSMLREGRVVGCVTSETAQVPGTTATPLGIMRYFCVATPAFA 60 Query: 174 EKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQ 233 ++FP+G+T + +APV+ FD D + F+ Q+ G P H ++SSE +V+ Sbjct: 61 ARWFPDGMTEQTVRRAPVMTFDRKDMLQTRFIAQHTGYT-GRYPHHALSSSEGYVRFVEA 119 Query: 234 GTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 G M+P Q ++L G LIDL PG + L WH + ++ R ++D L+ K Sbjct: 120 GFGYGMLPLQQCSRQLEEGTLIDLAPGKWLDVELIWHMWDIQTPFTRALSDNLIATARKS 179 Query: 294 L 294 L Sbjct: 180 L 180 >UniRef50_Q7W6A4 Putative LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W6A4_BORPA Length = 310 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 64/298 (21%), Positives = 109/298 (36%), Gaps = 8/298 (2%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQG 63 + R L+ V + R F+ AA KL +TQ+A+S RI LEN G+ L R R T G Sbjct: 2 NIRFLETFIWVAQLRSFKAAAGKLHLTQAAISGRIAALENDLGELLFERGSRDTRLTPAG 61 Query: 64 QKLLALLRQVELLEEEWLGDEQ-TGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IRL 121 + LL +++ + + +G+ + L V + TW P + + P + + Sbjct: 62 RTLLDYAQRMLDTDHAMRQALRGSGTLRGRVRLGVVESIVHTWFTPFIRRLSQTHPELEI 121 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 L E R Q+ L+ G + A+ +G L ++ S P Sbjct: 122 ELTAESTRRLQDLLKHGSIDVALQTDPIVGDDVRNRDMGMLKMGWICSPAAG---IPAQA 178 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 + + L P+V F H L + H V+S A Q G +P Sbjct: 179 SVAELATHPLVTFPRHSQPHLQLLDVLDAAGVQAGRIHFVSSIAACTQFIEAGLGAATLP 238 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPE--SRMMRKVTDALLDYGHKVLRQD 297 + LA+G + + + P+ + + V LD + + Sbjct: 239 LAAVRPGLAAGRYRQVCCTPDLPHLRLVASWRPDRVAGLAEAVVRLALDEMRLYAQHN 296 >UniRef50_B2VHX3 LysR-family transcriptional regulator n=2 Tax=Enterobacteriaceae RepID=B2VHX3_ERWT9 Length = 291 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 68/290 (23%), Positives = 110/290 (37%), Gaps = 14/290 (4%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTE 61 P R L + F RAAQ L +T SAVS +IK LE G+P+ +R + T Sbjct: 4 LPSLRALYYFHQAALHQSFSRAAQSLNVTHSAVSHQIKLLEEWLGKPVFLRINGRVQLTA 63 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS-PIR 120 G++L A Q E D+ LS++ LA WL+P + + I Sbjct: 64 DGERLKACCTQSFRSI-EATCDKIRARDLYTLSISCAPSFLAQWLIPRINRFTSRHSDIA 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYL-FVSSKPFAEKYFPN 179 L Q + ER+R + Q + + L A+DY+ V S F+ ++ Sbjct: 123 LTFQTHID---LERVRGEHTDILIVSHEQPVQQDITATLIAVDYIGPVCSPEFSHRFH-- 177 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 + P++ D + + ++ H ++ +Q AR G M Sbjct: 178 --YETDFSTLPLLHADTKLNAWSEWAKKTGARGDFWAGSH-FDNLTLAIQAARSGMGIIM 234 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDY 289 P + ++KE+ G LI G + W SR K + + Sbjct: 235 TPQILVKKEILDGSLIAPL-GFTEVDRATWMMIK-ASRQAEKGIELFRRW 282 >UniRef50_A9I5L1 Transcriptional regulator, LysR-family n=3 Tax=Proteobacteria RepID=A9I5L1_BORPD Length = 305 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 99/258 (38%), Gaps = 5/258 (1%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP-TE 61 P TL+A +AV R F RAA++L +TQ A+S ++++LE+ G PL VR T Sbjct: 7 LPPLMTLRAFEAVGRHLSFSRAAEELFVTQGAISHQVRKLEHALGGPLFVRRTRAIAFTP 66 Query: 62 QGQKLLALLR-QVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 +GQ +R ++LL + + L + + A A WL+P L P Sbjct: 67 RGQAYYQHVRAALDLLAQASRQARGAHAAAPQLKIGLLASFAARWLVPRLPAFTQAHP-D 125 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + LQ+ + + + G+V A+ + KL V + + Sbjct: 126 IGLQLVPDIGLAD-VAAGDVDLAIRYGRGHWQGVHLVKLMPECLAPVCAPALLGRRR-RF 183 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + +L+ P++ Q + S ++ ++ A G M Sbjct: 184 KSPGEILRYPLLVSHSRQPFEWDLWSQAQRVDLSSARTVHLHDYNIVIEAALAGQGIAMG 243 Query: 241 PHLQIEKELASGELIDLT 258 I+ L +G L+ Sbjct: 244 RLRLIQPLLDAGALVPPA 261 >UniRef50_D1RRX4 Transcriptional regulatory protein n=2 Tax=Enterobacteriaceae RepID=D1RRX4_SEROD Length = 329 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 105/293 (35%), Gaps = 11/293 (3%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQ 62 P R ++A +A+ R AA++L I+ SAVS ++K LE PL R + Sbjct: 41 PPLRAVRAFEAIARLGSITAAAKELAISPSAVSHQLKTLEAFLQMPLTERQGRNLILRSE 100 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IRL 121 G++ +R + + + S +++++ W +P L L ++P I + Sbjct: 101 GREYYRSIRSAFNVLRQATEHVREQSASRQVTISLIPLFGMGWFIPRLHGFLRENPDIDI 160 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 N+ + ++ +KL + + V S+ F + Sbjct: 161 NVVYANHRNYL----SDAADISIRFGVGQWTGYRSEKLMSGKMVPVCSRSFI-RLHGLLD 215 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 T L P++ D + + QQ P + + + G C ++ Sbjct: 216 TPDQLSPLPLL-HDEERNTWMQWFQQAGVRRPLRSTGPMFEDGLLTLAAVQSGLGCALMR 274 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRK---VTDALLDYGH 291 IE L SGEL+ L Y+ +S + ++ + LL Sbjct: 275 EPLIEPYLNSGELVKLFDRPIDDGRDYYLCVRADSELSQEGQNLQQWLLREAA 327 >UniRef50_Q123P6 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q123P6_POLSJ Length = 303 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 66/305 (21%), Positives = 112/305 (36%), Gaps = 15/305 (4%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP- 57 MKR P + L A DAV R RAA LC++ S +S+++ LE+ G PLL + Sbjct: 3 MKRACPTIQELLAFDAVARHGSLTRAAGALCVSVSGISKQLAGLESFVGHPLLEKQGRGV 62 Query: 58 RPTEQGQKLLALLR-QVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLAD 116 + T G++ + + +E + GS +LSLA L WL+P LA Sbjct: 63 QLTTIGREYWTKIGPSLRTIETASFEAKSAGSGAGVLSLASVPTFLTKWLIPRLADFRRL 122 Query: 117 SPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFA--E 174 P + + E E+ A+ P + + +++ V S Sbjct: 123 HP-GVTFSFSQHLGSTEP-HPTEIDAAIRYGSAVWPGVESEYIAGREFVCVCSTEHLQSR 180 Query: 175 KYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQG 234 ++ P V + LL D + +++ ++ A +Q G Sbjct: 181 RWTPKEVLKQTLLHH-----DQAPAAWAHWAERHGIDDVHTLAGPRFAQYSALIQAVLSG 235 Query: 235 TTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWH--RFAPESRMMRKVTDALLDYGHK 292 ++P + IE+ELA I L + + Y + + +L G Sbjct: 236 LGIGLVPKILIEEELAEKRAIALGEVVVMDQGHYLCFMPNRLDRPIFAAFRTWILQEGKG 295 Query: 293 VLRQD 297 L D Sbjct: 296 SLSSD 300 >UniRef50_A1B2P4 Transcriptional regulator, LysR family n=2 Tax=Paracoccus denitrificans PD1222 RepID=A1B2P4_PARDP Length = 300 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 100/293 (34%), Gaps = 5/293 (1%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRP 59 M L+A +AV R + F+ AA+ L +TQSAVS +++ LE G L R+ P Sbjct: 1 MSLLPLNALRAFEAVARLKSFKEAAKALFVTQSAVSHQVRHLEEFLGVALFDRSGARPEI 60 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP- 118 +GQ+L L E + L +A WL+P L+ P Sbjct: 61 LPRGQELARTLSLSLAEIEAACKRVRRAGEAQPLVIAAIPSVAICWLIPRLSRFRQAHPD 120 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 + L + + + R + LP V + V + Sbjct: 121 VALRVVYAIHGQEID-FRGTHFAFVFADSPPVLPGVRVLAFLPGESAPVCNPSLLPALGE 179 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 + + + A ++ H F + + PG + A G Sbjct: 180 GPPSAAGIKAAGLLYDTDTSAWHAWFARVGSGIEPGEA-GPVFEDFNLLRAAALAGQGVA 238 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFA-PESRMMRKVTDALLDYG 290 + P I+ +L +G L+ L+P Y+ + P + + A D+ Sbjct: 239 LCPLAMIQDDLDAGRLVQLSPVTVLENYGYYLLASDPPPADLAENAQAFQDWA 291 >UniRef50_D0YXG6 D-serine dehydratase transcriptional activator n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YXG6_LISDA Length = 310 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 60/272 (22%), Positives = 99/272 (36%), Gaps = 14/272 (5%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPPRPTEQGQ 64 L + F RAA+ LC+TQSAVS +IK LE + G L +R T +GQ Sbjct: 11 LSGLHCFLIAADQMSFTRAAETLCLTQSAVSHKIKNLEEILGVKLFIRQPRKLTLTPEGQ 70 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IRLNL 123 L +L + D ++ L+++V WL+P L L P +R++L Sbjct: 71 HLKEVLAHNFGDIALEIRDLKSTELSGELNVSVPPTFAQRWLVPRLKGFLDKYPSVRVHL 130 Query: 124 QVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEK----YFPN 179 + ++ + A+ H KL L V S +A + + P Sbjct: 131 RTRND---LVDFQTESFDCAIYFGHGKYAGLHAVKLMDETMLPVCSHEYAVEHNLYHHPE 187 Query: 180 GVTRSALLK--APVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 + LL AP D+ + +LP + ++ +Q A +G Sbjct: 188 NLILCLLLHDAAPWARAGRNDEWQYWAKRFGVELPDNGC---TFDRADLALQAAERGIGV 244 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYW 269 M I ++L L+ Y+ Sbjct: 245 AMGRRSFITEQLKENRLVTPFDMSVFSPQHYY 276 >UniRef50_A4XUE8 Transcriptional regulator, LysR family n=3 Tax=cellular organisms RepID=A4XUE8_PSEMY Length = 311 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 66/299 (22%), Positives = 117/299 (39%), Gaps = 13/299 (4%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-P 59 M++ L AV E+GF AA +L ++ SAVSQ I+ LE G L RT Sbjct: 1 MRQDHLDGLLTFIAVAEEKGFSAAAVRLGVSPSAVSQSIRNLEQRLGLVLFNRTTRSVCL 60 Query: 60 TEQGQKLLALLRQVELLEEEWLGD--EQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 TE G++ L ++ L + + + LL + V + L P L +A Sbjct: 61 TEIGERYLERVQPALELLKSASQELGREADHPSGLLRINVPRAAYLIILQPVLRRFMAAY 120 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLG-ALDYLFVSSKPFAEKY 176 P +NL++ E + + +G + + +G L ++S + ++ Sbjct: 121 P-EINLEIRVENLLVDIVSQG-FDAGIRFGDAVEKDMVAIAVGPTLQAQVIASPTYLVQH 178 Query: 177 ----FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLAR 232 P +T + ++ + + + +DL P I+N SE V+ A Sbjct: 179 GVPTHPQQLTMHNCIGYRHTTSGQIERWNFSRGDEKYDLTPRG--RLILNDSEILVRAAL 236 Query: 233 QGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGH 291 +G + + IE +A G L+ L H + P+ R + AL+D+ Sbjct: 237 EGLGVAYMINGYIEALVAQGRLVRLLADWSPTLPAL-HLYYPDRRRVPAKLRALIDFLR 294 >UniRef50_Q218F8 Transcriptional regulator, LysR family n=12 Tax=Rhizobiales RepID=Q218F8_RHOPB Length = 321 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 68/284 (23%), Positives = 107/284 (37%), Gaps = 6/284 (2%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQG 63 D++ ++ V+ F AAQKL TQ A+SQRI QLE G LL R PT G Sbjct: 3 DFKAIETFLWVVTLGSFRGAAQKLNTTQPAISQRIAQLERELGVKLLQRDHRSASPTPSG 62 Query: 64 QKLLALLRQVELLEEEWLGDEQTGST-PLLLSLAVNADSLATWLLPALAPVLADSP-IRL 121 ++++ ++ L E L S +L L V + TWL + V P + L Sbjct: 63 RQMMVYAEKLIGLRSEMLAVVGDRSAMRGVLRLGVAETIVHTWLPQLIKSVNRAYPNLSL 122 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 ++VE + RL E+ A + P+ L F++S + Sbjct: 123 EIEVEITPDLRARLMAQEIDLAFLLGPLPDPTVRNRLLCEYPVGFLASPSLG--LGDATL 180 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 T L K P++ F ++ + H S + +A +G +IP Sbjct: 181 TLRDLAKHPIITFPRKSQPYETIRSLFNRPELPPIRLHASASLATVIHMAVEGLGIAVIP 240 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDA 285 +E EL G L L L + + + +S V Sbjct: 241 TDIVEAELGDGRLQLLKTDLHIPPLTFSASW-LDSADTTAVERV 283 >UniRef50_Q11AM5 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11AM5_MESSB Length = 308 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 57/295 (19%), Positives = 107/295 (36%), Gaps = 11/295 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P ++ L A + V R F RAA++L +TQSAVS++++QLE G LL R T Sbjct: 8 MPSFQELVAFETVARRGNFTRAAEELALTQSAVSKQLQQLERSLGAVLLKRNRGQVSLTP 67 Query: 62 QGQKLLALLRQVEL-LEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G L +++ + G +L++ V + WL+P L L P Sbjct: 68 AGFTYLNATQEILARFRMAAMSVGAAGGKESVLNVVVLPTFASQWLMPRLPRFLEIWP-- 125 Query: 121 LNLQVEDETRTQE-RLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 NL V TR + A+ ++ ++ V S F +++ Sbjct: 126 -NLTVNLTTRVEPYDFHGNSYDVAIHYAAVNWDGPDAIRICGELFIPVVSPEFRDRF--Q 182 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 S + A ++ + + + + + +++ + A G + Sbjct: 183 LFDPSDVANATLLQQADRPGLWSEWFEASGIMCRDPYRGPVLDRFSMTIGAACAGLGVAL 242 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHR---FAPESRMMRKVTDALLDYGH 291 +P + EL S L+ L+ + Y+ + L++ G Sbjct: 243 VPIFLVATELMSKVLVTLSTKPYPGAGAYYALIPPSKLRDPHATAFREWLVEEGR 297 >UniRef50_P12529 HTH-type transcriptional activator ampR n=19 Tax=Bacteria RepID=AMPR_CITFR Length = 291 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 64/298 (21%), Positives = 103/298 (34%), Gaps = 13/298 (4%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP- 57 M R +L+A +A R F RAA +L +T SA+SQ +K LE L VR Sbjct: 1 MTRSYIPLNSLRAFEAAARHLSFTRAAIELNVTHSAISQHVKSLEQQLNCQLFVRGSRGL 60 Query: 58 RPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 T +G+ LL +L L T T L + V L P L+ Sbjct: 61 MLTTEGESLLPVLNDSFDRMAGMLDRFATKQTQEKLKIGVVGTFAIGCLFPLLSDFKRSY 120 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 P ++L + + G + + A L + + S A Sbjct: 121 P-HIDLHISTHNNRVDPAAEG-LDYTIRYGGGAWHDTDAQYLCSALMSPLCSPTLAS--- 175 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 T + +LK P++ D+ P + + +SS ++ A+ G Sbjct: 176 -QIQTPADILKFPLLRSYRRDEWALWMQAAGEAPPSPTHNVMVFDSSVTMLEAAQGGMGV 234 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYW---HRFAPESRMMRKVTDALLDYGHK 292 + P L+S ++ YW + PE+ MR+ + L HK Sbjct: 235 AIAPVRMFTHLLSSERIVQPFLTQ-IDLGSYWITRLQSRPETPAMREFSRWLTGVLHK 291 >UniRef50_Q30Z73 Transcriptional regulator, LysR family n=3 Tax=Desulfovibrio RepID=Q30Z73_DESDG Length = 319 Score = 167 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 60/300 (20%), Positives = 113/300 (37%), Gaps = 10/300 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 D+R L+A V R F RA +L ++Q +S + LE LL R PT Sbjct: 23 MIDFRRLEAFCKVYELRSFSRAGDELFLSQPTISAHVSALEKELDVRLLDRMGRGVLPTP 82 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSL-ATWLL-PALAPVLADSP- 118 G+ L E + + + V A ++ A +LL P +A + P Sbjct: 83 AGEILYRHAMTAFASLETAHLEISQLQDIITGEVPVGASTIPAQYLLPPVMAAYMRSFPE 142 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 ++L L+ D ++ GE+ V H P + + + + + + FA + Sbjct: 143 VQLQLRTGDTGEIIRKVGAGELTLGVVGAHDQQPDIVFTPIIDDELIIIGAPDFAPR--S 200 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPP---GSVPCHIVNSSEAFVQLARQGT 235 V+ +L P V + + F P V+SS++ +Q R G Sbjct: 201 GSVSCESLADMPWVVREAGSGTWKIFSAALGTHGIDCRSFRPVACVDSSQSVIQCVRAGL 260 Query: 236 TCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 + + + + L+ GEL+++T R ++ + ++ +++ K R Sbjct: 261 GVSVTSRIAVAEFLSRGELVEITVDGLDVRREFFCIYHSRRQLFPA-ARHFIEFLTKKCR 319 >UniRef50_A8GAZ3 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=A8GAZ3_SERP5 Length = 303 Score = 167 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 69/299 (23%), Positives = 114/299 (38%), Gaps = 11/299 (3%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-P 59 M+ D+ L+A ++ F RAA +L I+ SA+SQ + LE G LL RT Sbjct: 1 MRGSDFAELRAFAVIVEHGSFTRAAAQLGISASALSQTQRNLETRLGVRLLNRTTRSVAL 60 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLA--TWLLPALAPVLADS 117 T+ G+ LLA L E + +L +NA LA +L P LAP A Sbjct: 61 TQAGELLLARLSPAMAEIEAAVTQTAALRLQPAGTLRLNASGLAAIHYLAPLLAPFNAHY 120 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGAL-DYLFVSSKPFAEKY 176 P + + + E R + + G V + + + LG V+S + +Y Sbjct: 121 P-DIVVDLSVEDRLVDMVAAG-FDAGVRLHERLEKDMVAVALGGEQRMCVVASPAYLARY 178 Query: 177 FPNGVTRSALLKAPVV---AFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQ 233 T AL + + + F + L IV+ + V+ A Sbjct: 179 GTPQ-TPDALRQHRCLNTRWPTNGSIYRWEFERGGEKLEIAVEGPLIVDEPQVLVRAAAD 237 Query: 234 GTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHK 292 G + Q+ + L G L+ L ++ + P +R M + A +D+ + Sbjct: 238 GLGIAYLFESQVAEALNDGRLLPLLAAWTPPFPGFY-LYYPANRQMPRPLRAFIDFARQ 295 >UniRef50_Q0K3U7 Transcriptional regulator, LysR-family n=1 Tax=Ralstonia eutropha H16 RepID=Q0K3U7_RALEH Length = 325 Score = 167 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 60/270 (22%), Positives = 104/270 (38%), Gaps = 9/270 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P L A + R AA++LC+TQSAVS++I +LE+ G +L R T Sbjct: 32 LPALANLIAFETTARTGSVTGAAEELCLTQSAVSKQITELESFLGARMLNRRKGAVAATP 91 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGS-TPLLLSLAVNADSLATWLLPALAPVLADSP-I 119 G+ L +R+ L EE + Q+G L+L+V WLLP + + P I Sbjct: 92 AGEDYLRNVRKALALLEEATMEVQSGRAAGGRLNLSVPVSLGNIWLLPRILRFVKAQPQI 151 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 +LN+ + L + A+ P K+ L + + Sbjct: 152 QLNVTTKVGPV---DLESTGLDAAIMYCAGPPPRHFSLKVMPLVLYPMCAPELLP---GG 205 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 G A+ + P++ + A+L+Q P +Q A G + Sbjct: 206 GTLAKAVKRLPLLHQIAALEAWPAYLRQAGIKLPHPDDGSRYGLLTMGLQAAVSGMGVAL 265 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYW 269 +P +++ +G L+ L+ + Y+ Sbjct: 266 LPDYVAGEDIKAGRLLRLSDEPYVSPKAYY 295 >UniRef50_B7KPE2 Transcriptional regulator, LysR family n=26 Tax=Proteobacteria RepID=B7KPE2_METC4 Length = 297 Score = 167 bits (422), Expect = 6e-40, Method: Composition-based stats. Identities = 60/299 (20%), Positives = 111/299 (37%), Gaps = 13/299 (4%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-P 59 M R L A AV R F +AA +L ++Q A+SQ ++ LE G LL RT P Sbjct: 1 MLRESLNDLVAFVAVARAGSFTKAAAQLGVSQPALSQTVRGLEARLGVRLLARTTRSVAP 60 Query: 60 TEQGQKLLALLRQVELLEEEWLG--DEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 TE G++LL + EE L E G + + + + + L P L +L D Sbjct: 61 TEAGERLLNAVGPRFDEVEEGLAGLAEMRGKAAGTVRITADEHAAQSVLWPVLRRLLPDY 120 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGA-LDYLFVSSKPF---- 172 P + ++ + + + + + + ++G L V++ + Sbjct: 121 P-DIKVETVVDYGLTDIVAE-RIDAGIRLGGTLARDMTAVRIGPDLRMAAVAAPSYFAAR 178 Query: 173 AEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLAR 232 ++ P+ +T + + H F + +L + N+ ++ A Sbjct: 179 SKPERPDDLTAHTCINLRLPT--HGGLYAWEFEKGGRELRVWVEGQLVFNTITLILEAAL 236 Query: 233 QGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGH 291 G +P + LA+G L+ + + Y H + P R L++ Sbjct: 237 DGFGIAYLPEDGVRAHLAAGTLVRVLEDWCEPYSGY-HLYYPSRREPAPALAVLVEALR 294 >UniRef50_P30864 Uncharacterized HTH-type transcriptional regulator yafC n=94 Tax=Bacteria RepID=YAFC_ECOLI Length = 304 Score = 166 bits (421), Expect = 7e-40, Method: Composition-based stats. Identities = 58/298 (19%), Positives = 107/298 (35%), Gaps = 7/298 (2%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-P 59 MK L +V+ F RAA++L SAVS+ +K+LE G LL RT Sbjct: 1 MKATS-EELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMKLGVSLLNRTTRQLSL 59 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQ--TGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 TE+G++ ++ + + + LL + + +L+P + P Sbjct: 60 TEEGERYFRRVQSILQEMAAAESEIMETRNTPRGLLRIDAATPVVLHFLMPLIKPFRERY 119 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 P + L + + R +V A+ S L ++S + +Y Sbjct: 120 P-EVTLSLVSSETIINLIER-KVDVAIRAGTLTDSSLRARPLFNSYRKIIASPDYISRY- 176 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 T L + + F ++ + ++ NS E QL G Sbjct: 177 GKPETIDDLKQHICLGFTEPASLNTWPIARSDGQLHEVKYGLSSNSGETLKQLCLSGNGI 236 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 + I+KE+A GEL++L + + R + A +D+ + ++ Sbjct: 237 ACLSDYMIDKEIARGELVELMADKVLPVEMPFSAVYYSDRAVSTRIRAFIDFLSEHVK 294 >UniRef50_C5AIJ9 Transcriptional regulator, LysR family protein n=4 Tax=Burkholderia RepID=C5AIJ9_BURGB Length = 301 Score = 166 bits (421), Expect = 8e-40, Method: Composition-based stats. Identities = 65/304 (21%), Positives = 115/304 (37%), Gaps = 12/304 (3%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-P 59 M R L A A+ +R F AA+ L ++ SA+S ++ LE G L RT Sbjct: 1 MLRAGLSELTAFVAIAEQRSFRAAARALAVSPSALSHAMRSLEARLGVRLFNRTTRSVAL 60 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPA--LAPVLADS 117 TE G++LL + E + + T S+ +NA + LL L L Sbjct: 61 TEAGERLLHRVGPALSDLESAVDEVSTAQNRPSGSVRINAPETSARLLIRHVLPDFLLRY 120 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGA-LDYLFVSSKPFAEKY 176 P ++++ +TR + + G + + + G + ++ V+S + ++ Sbjct: 121 P-DIHVEFVTDTRLIDIVAEG-FDAGIRALDDVPRDMIAVRFGPDMRFIAVASPAYLARH 178 Query: 177 FPNGVTRSALLKAPVV--AFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQG 234 P + L++ + F+ + F + + A ++ A G Sbjct: 179 -PAPERPADLMQHRCIRHRFESGALLRWDFQLDGKTCSLDVNGPLTLGNPNAMIEAALAG 237 Query: 235 TTCCMIPHLQIEKELASGELIDLTPGLFQRRM---LYWHRFAPESRMMRKVTDALLDYGH 291 +P QIE+ LASG LI L LY+ +R T A+ D+ Sbjct: 238 IGVAWVPESQIEEHLASGRLIALLDAWSVPLPGLALYYPANRHPPAPLRLFTQAVRDWVA 297 Query: 292 KVLR 295 +R Sbjct: 298 GGVR 301 >UniRef50_Q2SHX6 Transcriptional regulator n=2 Tax=Oceanospirillales RepID=Q2SHX6_HAHCH Length = 298 Score = 166 bits (420), Expect = 9e-40, Method: Composition-based stats. Identities = 69/292 (23%), Positives = 107/292 (36%), Gaps = 9/292 (3%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPPRPTEQGQ 64 + TL +A R F AA++L +T AVSQ+I++LE G L R R T +G Sbjct: 9 FSTLIYFEACGRLLSFSEAARELYVTTGAVSQQIRKLEEQLGIKLFERRPSGIRLTAKGS 68 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQ 124 +LL + RQ + QT + + L + WL+P L P + ++ Sbjct: 69 ELLTVTRQSIDAIRLTVDRLQTSTNDSAVRLTSTPSFVFKWLIPMLKEFNLSHP-DIKIE 127 Query: 125 VEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF---PNGV 181 E L A+ + L L V S + + PN Sbjct: 128 TYAEAALLN-LSTASFDLAIDYSAGEYQNFDATLLVEEILLPVISPEYMKGANWQDPNIW 186 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPG-SVPCHIVNSSEAFVQLARQGTTCCMI 240 +LL + D D + LP S H N S+ + A G + Sbjct: 187 DSVSLLHDAMPWPDSPRDAEWRYWLDQSGLPDAPSQQGHYFNRSDMAIAAADAGLGVALA 246 Query: 241 PHLQIEKELASGELIDLTPGLFQ--RRMLYWHRFAPESRMMRKVTDALLDYG 290 +++ELA+G LI P + L H+ SR + ++ D LL Sbjct: 247 RGSLVKEELANGRLIAPLPAMPSCCNYYLITHKGKAVSRNVSELKDWLLSKA 298 >UniRef50_A0KG02 Transcriptional regulators, LysR family n=3 Tax=Gammaproteobacteria RepID=A0KG02_AERHH Length = 318 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 117/297 (39%), Gaps = 8/297 (2%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQGQ 64 + DA++RE+G AA++L +++S +S+++ QLE G L+ RT TE GQ Sbjct: 5 LPQMVIFDALVREQGISAAARRLGVSKSHISKQLAQLETELGAQLVQRTTRRFSLTELGQ 64 Query: 65 KLLALLRQVEL--LEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 + R + LE + + E+ G +L L V ++P L P L Sbjct: 65 EYARHCRALVAVALEADSMVAERRGKVSGILHLGVGQSFGRLHVIPRLKAFQDRYP-ELE 123 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 L+V + G + ++ + + +L + ++ V+S + + + Sbjct: 124 LEVSLFDHRTNLVDEG-LDLWITTYEDKPEALVGQRLADIHFVLVASPDYLLSHGT-PLH 181 Query: 183 RSALLKAPVVAF-DHLDDMHQAFLQQNFDLPPGSVPCHI-VNSSEAFVQLARQGTTCCMI 240 L + + + H+ +Q + V + V+ +EA A G + Sbjct: 182 PRDLAQHNCITYQSRERRYHEWSFRQGKERQTVQVAGNYRVDLAEAVRDAALAGLGIAYV 241 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 + ++KEL SG+LI L P + + H + +D+ + + Sbjct: 242 ANYLLDKELQSGQLIPLLPQWRPNQKMAVHAVYARREHLDPKIRLFIDFLKESFGPN 298 >UniRef50_A5V568 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V568_SPHWW Length = 313 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 111/297 (37%), Gaps = 10/297 (3%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-P 59 M+R + T +A AV+ F AA++L +++SA+S+ + LE G LL RT P Sbjct: 1 MRR--WETYEAFIAVVECGSFTAAAERLRLSKSAISRSVSSLEARLGSQLLFRTTRRLAP 58 Query: 60 TEQGQKLLALLRQVELLEEEWLGD--EQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 T+ G+ + ++ + E + E S L + + ++ P LA + Sbjct: 59 TDLGRSVYRRCVELFDMLAEIDAEAMEHDASLRGKLRIVASDSFGECYIAP-LAAEMMRL 117 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 +L ++ RT + + G A+ Q S V KL L ++ +S + + Sbjct: 118 HEQLEIEFLVTDRTIDIVADG-YDMAIRYNAQVDSSLKVQKLYELPHICAASPEYLLRAG 176 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 T + L + + F P N+ A + A G Sbjct: 177 T-PFTLADLTRHNCLVSTFEACHAWRFGMGRTQKTPNLSGNWCSNNGPALLTAALNGIGI 235 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 +P L + + +G LI+L M W + +R A +DY L Sbjct: 236 VWLPELYLRPYIKAGALIELLGEHRSDPMPVWAVY--PARRQAAKVRAFIDYVKSRL 290 >UniRef50_C6DEW9 Transcriptional regulator, LysR family n=4 Tax=Pectobacterium RepID=C6DEW9_PECCP Length = 301 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 60/303 (19%), Positives = 116/303 (38%), Gaps = 12/303 (3%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP- 59 M R ++ ++ V+ F++AA+ L + S V++ IK+LE+ G LL RT Sbjct: 1 MDR--FQAMEIFIRVVDAGSFKKAAETLHVLPSTVTRSIKELESHLGARLLNRTTRALSI 58 Query: 60 TEQGQKLLALLRQVELL--EEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 T+ G + + + E + +Q G + + + +L+PAL Sbjct: 59 TDVGLRYYDSCKAILRDVHAAESVTAQQKGELNGTIRIGAPPSLVKNFLIPALPDFCERY 118 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 P + L T + ++ G + + L + +LGA + +S + E++ Sbjct: 119 P-GITLDFHLGDATVDIVQHG-IDCVIRTGEPPLSRLVARRLGAFHWYICASPRYLEQH- 175 Query: 178 PNGVTRSALLKAPVVAFDH---LDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQG 234 + T +L V + H F + + VN ++A+V G Sbjct: 176 GHPATLDSLKAHTAVGYIHSRTGRSTRWGFHDEAHTVAMPLAGQISVNDTDAYVAAGVAG 235 Query: 235 TTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 I + + LA G L+ L P + + P+SR + A +D+ + Sbjct: 236 LGLIRIASYMVRQPLADGHLVRLFPDIGAPLEPIF-ILYPQSRHLSPAIRAFIDWCTARI 294 Query: 295 RQD 297 Q+ Sbjct: 295 EQE 297 >UniRef50_Q39AZ7 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=Q39AZ7_BURS3 Length = 302 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 105/298 (35%), Gaps = 8/298 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPT 60 + P +TL+A +A R AA++L +T AVS+ IK LE G L R T T Sbjct: 4 RLPPLQTLRAFEATGRLLSMTLAAEELHVTHGAVSRHIKNLETHLGVALFQRLTRRIVLT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 E G L + + + + + L + + WL P L A P Sbjct: 64 EAGAAFLLDVSRTLGDLTKAAERLRAHDSVTRLKINASVSFANKWLAPRLHRFKALHP-E 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L++ + D T L GE A+ P L +++ V S + K Sbjct: 123 LDIHL-DVTDAHVDLNEGEADVAIRYGSGRYPRVLAERILEETVTPVCSPAYRAK-MDGL 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + ++ ++ D + + + S + ++ A +G + Sbjct: 181 ASVERIVDCTLLHEDRMLANWEQWFALAGIRGARSDRGPAYSHGSLAIEAAMRGEGIALG 240 Query: 241 PHLQIEKELASGELIDLTPGLFQR----RMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 + + ++A+G L+ P + L + + + + + D L + L Sbjct: 241 RSVIVADDIAAGRLVAPFPQYALQAERGHDLIYRIGSKDDPKVCALRDWLAEEIRVFL 298 >UniRef50_B3RAJ7 Putative transcriptional regulator, LysR family n=1 Tax=Cupriavidus taiwanensis RepID=B3RAJ7_CUPTR Length = 313 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 60/298 (20%), Positives = 107/298 (35%), Gaps = 11/298 (3%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRP 59 ++ P +L+A +A RAA L IT+SAVS++I LE++ G L R Sbjct: 3 LRLPSLSSLRAFEAAALHLNLRRAAADLFITESAVSRQIASLESLLGVQLFHRANQRITL 62 Query: 60 TEQGQKLLALLRQVEL-LEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 T G +R++ L+ + L + LA WL+P L A P Sbjct: 63 TAAGALYSVQVREMLRKLQRDTLEVMAHEGAGGTVELACVPTLAVEWLIPRLPDFYARHP 122 Query: 119 IRLNLQVEDETRTQERLRRGE-VVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 + V ++ L G A+ P D L + + V + Sbjct: 123 ---QVVVNISAQSDVFLFDGTPYDAAIHFGEAVYPGARADLLFGEESVAVCHPQLFGR-- 177 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 + + AP++ + +++ ++ + + AR G Sbjct: 178 KKRIDAHDIANAPLLHLATRSFGWKQWMEAAGIDDVNAMRGARFDHHSMVIAAARAGLGI 237 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRF---APESRMMRKVTDALLDYGHK 292 ++P +E+ LASG+L+ + Y+ P S M+ + LL+ K Sbjct: 238 GLVPRFLVEEYLASGQLVSPVARSLRATSAYYLVQPDTRPMSHAMQHLRAWLLEAASK 295 >UniRef50_A4XNC3 Transcriptional regulator, LysR family n=23 Tax=cellular organisms RepID=A4XNC3_PSEMY Length = 317 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 53/297 (17%), Positives = 97/297 (32%), Gaps = 6/297 (2%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQ 62 +L+ ++ R F AA + +Q A+SQ+IK+LE L R TE Sbjct: 8 ISLDSLRVFESAARLLSFTAAANEQGSSQPAISQQIKRLEQQLAVRLFDRVHRGLVLTEA 67 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 G+ LL +++ + L +L +A + A WL+P L P ++ Sbjct: 68 GELLLRYVQEGLHSLDSGLQAVVARQQHEVLQVATDFAFAAYWLMPRLQRFHQLHP-EVD 126 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 + + R GE+ A+S L + V S P Sbjct: 127 VSLVTTERDLGGNLPGEIDVAISFGDGRCKHGESLLLFGEEVFPVCSPHLLHGREPVDSA 186 Query: 183 RSALLKAPVVAFDHLDDMHQAF---LQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 + A+ + P S ++ +Q A G + Sbjct: 187 ALLARLPLLHLRPEARANWFAWDGVFRALGIAEPPSAGALRFDNYTLLIQAAIAGQGVAI 246 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 +++ LA G L+ + + Y+ PE + ++ +D+ L Sbjct: 247 GWRYLVDELLAQGLLVRMLDTSIRSAYGYY-VVMPERKRRARLVRCFVDWLQDELAS 302 >UniRef50_A9D6M6 Transcriptional regulator, LysR family protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D6M6_9RHIZ Length = 309 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 3/278 (1%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRP 59 M R ++A V F +AA KL TQ A+S RI LE+ GQ L VR + Sbjct: 1 MANFTLRQMEAFVWVAALESFRKAATKLNTTQPAISTRIATLEDQLGQQLFVRDAGQVQL 60 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP- 118 T GQ LL R++ + ++ E + +L L V + +WL L + P Sbjct: 61 TSAGQMLLPKARRLISIADDISTGEGSEKQRGILRLGVAETIVHSWLPDFLKALSRRFPL 120 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 + +++ V+ + L + A + + L A ++ ++ A Sbjct: 121 VDVDVLVDVTVNLRNELIDHRLDLAFLMGPVSEYRIGNVDLPAFPLIWTAAPELAMPE-T 179 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 V +ALL PV+ + + Q+ DL V++ A +++A G Sbjct: 180 KEVPLTALLAHPVITYARTTRPYAELRQKFSDLNGPLPRIFPVSTLAASLRMALDGVGIA 239 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPES 276 ++PH + + LA+G+L + +++ + E Sbjct: 240 VLPHTMVREHLATGQLHQVNCEWTPPELIFTASYTAEP 277 >UniRef50_B4EPZ1 LysR family regulatory protein n=8 Tax=Proteobacteria RepID=B4EPZ1_BURCJ Length = 330 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 63/306 (20%), Positives = 111/306 (36%), Gaps = 12/306 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPT 60 P L+ + R F RA Q+L +TQSAVS+++K LE L R + T Sbjct: 12 SLPSLDFLRGFECAARHLSFTRAGQELNVTQSAVSRQVKALEEQLRIELFHRHIRSLTLT 71 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 ++G++L + E +G + +SL+ A WL+P L A P Sbjct: 72 DKGRELYDAISFALSDLESVVGKLSSSVGQRAISLSTTVSFAALWLIPRLGSFRASYP-D 130 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF-PN 179 ++++V + E L+R + AV + D L + V S Sbjct: 131 IDVRVSATSEI-EDLKRKRLHLAVRYAGPYTSTDDTDVLFRERVVAVCSPSLLTAMGDAA 189 Query: 180 GVTRSALLKAPVVAFD--HLDDMHQAFLQQNFDLPPGSVP---CHIVNSSEAFVQLARQG 234 + + L K ++ D + + +L + + + VQ A G Sbjct: 190 SMKPADLDKHVLLHLDDPRGEWPWHGWSHLLKELGVPRLRPAGALHFSQYDQLVQAAVDG 249 Query: 235 TTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRM---MRKVTDALLDYGH 291 + ++ L G L++L P Y P++ + +T+ LLD Sbjct: 250 HGIAIGRRPLVDGLLKQGRLVELFPHCTVASGSYVLVQNPDACNEFDIAVLTNWLLDQAC 309 Query: 292 KVLRQD 297 L + Sbjct: 310 PALAPE 315 >UniRef50_D1P0T8 Transcriptional activator AmpR n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P0T8_9ENTR Length = 326 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 65/288 (22%), Positives = 116/288 (40%), Gaps = 11/288 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 R L+A +A R F RA +L +TQ+AVSQ+++ LE G L +R T+ Sbjct: 42 RLPLNALRAFEASARHLSFTRAGMELNVTQAAVSQQVRLLEEQLGLELFIRLPRGLALTD 101 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 +G LL +L + E L G +L+++V WLLP L+ P + Sbjct: 102 EGSALLPVLSRSFDQIEALLQQFDDGHYHEVLNISVVGTFAVGWLLPRLSRFSELYPY-I 160 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +L++ G V A+ P L + + + S+ A++ Sbjct: 161 DLRIMTHNNVVNLAGEG-VDFAIRFGEGLWPLVDNTPLFSAPHTVLCSEKIAKQLN---- 215 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 + L P++ D+ + FL + P V I +SS V+ A + + P Sbjct: 216 HPTDLKNYPLMRSYRKDEWEKWFLAAK--IEPWRVKGPIFDSSRLMVEAALFSDSVAIAP 273 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDY 289 E+EL++G+++ + YW +S+ M + ++ Sbjct: 274 SCMFERELSAGDVVQPF-DISVTLGGYWLS-RLKSKPMTPAMNIFRNW 319 >UniRef50_C5AEG0 Transcriptional regulator, LysR family protein n=4 Tax=Betaproteobacteria RepID=C5AEG0_BURGB Length = 292 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 102/293 (34%), Gaps = 10/293 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTE 61 P + L+A +A R F A +L +T A+S+++ LE G+P+ R R TE Sbjct: 5 LPPFPALRAFEAAARHESFSAAGDELHVTHGAISRQVAALEAWLGRPVFQRHGKRVRLTE 64 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G++ LA + + + +L + + WLLP L+ D P + Sbjct: 65 DGRRYLASVSAAFEQIATATARMRDTAPEHVLRINAQSTIAMKWLLPRLSRFQRDMP-NV 123 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 L++ + ++L G+ A+ P+ L V S ++ Sbjct: 124 ELKLSTSSAPLDQL-DGQFDVAIRSGPGHWPNRATGHFLDETLLPVCSPALLKRM--PIA 180 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 L + ++ D + + P + + +Q A G + P Sbjct: 181 QADDLSRHVLLHSDTRPTAWRDWFAAA-GTPLRARKKQSFDHFYLALQAAVDGLGVALGP 239 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTD--ALLDYGHK 292 I+ ELA G L+ G YW + V A LD + Sbjct: 240 LPLIDDELAGGRLVLPLDGPRIASRRYW--WIAAREAAPPVVQFCAWLDAQAR 290 >UniRef50_B2T5C1 Transcriptional regulator, LysR family n=50 Tax=Proteobacteria RepID=B2T5C1_BURPP Length = 323 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 60/300 (20%), Positives = 112/300 (37%), Gaps = 15/300 (5%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 + P L+A +A R F AA+++ +TQ AV+Q+++ LE++ G L R T Sbjct: 9 RLPPLNALRAFEAAARHLNFRVAAEEIGVTQGAVAQQVRNLEDVLGHQLFDRVPRGLALT 68 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-I 119 G + +++ + E L+++ + WL+P LA P I Sbjct: 69 ANGSIYFSSVQRALTIIANA--TEALAHRASSLTVSTTPSFASKWLIPRLATFTDAHPSI 126 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQ-HQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 + + + + T + V A+ D L +D V S A+ P Sbjct: 127 EVRVIADQQLST---FKGDGVDIAIRHGKPPFGKGLAADPLFPVDIYAVCSPSLADARRP 183 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQ-NFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 S L + ++ H ++ FL+ N + + S + A G Sbjct: 184 LK-KPSDLKRHVLLHDSH--NLWPEFLEALNEGGHVDASKGPRFSQSALAIDAAISGQGI 240 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRF---APESRMMRKVTDALLDYGHKVL 294 + +E++LA+G L L + Y+ + +S +R + D L+ L Sbjct: 241 ALTSEQLVERDLAAGRLCRLFDFALHLSLGYYVVYPEDRRDSETIRAMRDWLITQARYEL 300 >UniRef50_B9Z1E8 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1E8_9NEIS Length = 294 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 56/289 (19%), Positives = 104/289 (35%), Gaps = 10/289 (3%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQ 62 P L ++ R + RAA++L ++QSA+S++++ LE G L R R T+ Sbjct: 8 PSMSLLLVFESAARHESYTRAAEELSLSQSAISRQVQALEEHLGLKLFRREGRSVRLTDA 67 Query: 63 GQK-LLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G++ L L + + L + S L LA + WLLP L A P Sbjct: 68 GRRYYLELSEALGRIRSATLQAMSSQSGTGALRLATLPTFGSKWLLPRLHEFYASHP--- 124 Query: 122 NLQVEDETRTQE-RLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + + +R + E+ A+++ P + +L + + E Sbjct: 125 GVTIHIHSRIGDIDFNTSEIDAAITVGTGDWPGMMAHRLYNEFLVAIVDPSGVED--GQD 182 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + +K ++ + + +Q R G ++ Sbjct: 183 IAPDWAMKQTLLTVASNPQAWAEWFSHYHLDHRQMRMGPSFELTSHLIQAVRAGIGIGLV 242 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDY 289 P I EL ELI + + R Y+ + P + + +T A D+ Sbjct: 243 PQALIMDELQRKELITIGEAIASPRS-YYLVYPPRNASLPSLT-AFRDW 289 >UniRef50_A3K624 Transcriptional regulator, LysR family protein n=1 Tax=Sagittula stellata E-37 RepID=A3K624_9RHOB Length = 311 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 102/295 (34%), Gaps = 13/295 (4%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTE 61 P L+AL++ R + +L ++QSAVS+++K LE+ PL R T Sbjct: 8 LPPMTALRALESFERTGNVTQTGLELGVSQSAVSRQLKVLEDYLDTPLFTRDRKAIALTP 67 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP--- 118 + +R + L++A+ WL P L +A P Sbjct: 68 AARDYCTQIRAALEQIGTASLRLKANPRGGQLNIAMLPAFGVRWLAPRLPDFVARHPEVT 127 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 + L+ +++ E GA+ + +L + V+S A Sbjct: 128 VNLSTRLKPFDFASEPFH-----GAIHFGGRDWSDVAYQELMREYVVPVASPKVAGTL-- 180 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 G T + L P++ + D + + Q + + + VQ A G Sbjct: 181 RGNTLTDLFSLPLLHLETRPDAWEKW-AQALGEEVECPVGMLFDQFASMVQAAIHGMGAA 239 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 ++P +E EL G L+ L Y+ + + + +D+ K Sbjct: 240 LLPTYLVENELQDGRLVALWSESKTSVGTYYFVWPKDEPNYQP-RALFVDWLRKA 293 >UniRef50_A4F1D5 Transcriptional activator AmpR n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4F1D5_9RHOB Length = 301 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 71/295 (24%), Positives = 116/295 (39%), Gaps = 8/295 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPPRPTE 61 P + ++ +A R F RAA +L +TQ+AVS +IKQLE+ GQPL R PT Sbjct: 8 LPPLQAVRVFEAAARLGSFSRAADELAMTQAAVSYQIKQLEDRAGQPLFRRLPRGVVPTL 67 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G+ + + + G+ L ++ A A L P L +P + Sbjct: 68 AGKAFQRQAAEALDRLRQGWAELL-GAEGEDLVISTIASFAAFILGPWLGLFQVANP-GI 125 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +V+ R + L GE A+ P D L Y + E++ P Sbjct: 126 TTRVDVNPRPADLL-AGEASIAIRAGRGDWPGLAADLLIRASYTPYLTPALLEEHGPFN- 183 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 T S LL+ P++ D D + + PP S+ H + S VQ A G C++ Sbjct: 184 TPSDLLRVPLI--DASDPAWAIWFRDAGVEPPKSLERHSLGSQLLEVQAALAGQGACLLT 241 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 + SG L+ + + + W PE+R A ++ +++ Sbjct: 242 PAYARGLVKSGALVQPFDLVTEDDISIW-LVYPEARREAPSIVAFRNWLMAQIKE 295 >UniRef50_C5AJX7 Transcriptional regulator, LysR family protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5AJX7_BURGB Length = 315 Score = 163 bits (414), Expect = 4e-39, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 108/294 (36%), Gaps = 9/294 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P R L+ +V R R + AA+++ +T SA+SQ+I +LE G LL R+ T Sbjct: 12 LPSLRALRYFVSVGRHRSIKIAAEEIHVTPSAISQQIVKLEEELGVSLLQRSPRGIDITP 71 Query: 62 QGQKLLALLRQVELLEEEWLGDEQT-GSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G + L L+QV L ++ + +++++ WL+P L+ + A Sbjct: 72 HGSRYLQELQQVFDLILRATDRLRSNANHTDIVTVSCAHSFAMQWLVPRLSDL-AQYAPS 130 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 ++L++ R + ++ + P + L + S E+ P Sbjct: 131 VDLRISTTNRYAAFIDD-QIDFGLRHGTGRYPGLKSELLLDDPLYPICSPRLVERLGP-F 188 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + L + ++ + + +L+ + + S +Q A + Sbjct: 189 ASYQDLARTTLLHDERHKEW-LGWLRHHGVEGVRGDKGAVFIDSNGMLQAAVACHGVALA 247 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRF---APESRMMRKVTDALLDYGH 291 + ELA G L L F Y+ + ++ R + L+ Sbjct: 248 RRSIVASELADGRLTVLFDAPFTPDYAYYLVYPEQTLDNPSARVFREWLMQAVK 301 >UniRef50_C7RIQ1 Transcriptional regulator, LysR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RIQ1_9PROT Length = 312 Score = 163 bits (414), Expect = 5e-39, Method: Composition-based stats. Identities = 54/284 (19%), Positives = 99/284 (34%), Gaps = 7/284 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPT 60 + P +L+ A +AA +L +T AVS +++QL++ G L R+ + T Sbjct: 6 RSPPLGSLRVFVAAADSESVTKAAAQLHLTHGAVSHQLRQLQDYLGVALFERSGRGLKLT 65 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 QG + + + L + A WLLP L ++ Sbjct: 66 TQGAAYAERVSRALAEIGKATEQLIAARDYRRLRVTCMPSFAARWLLPRLGSFISCHR-E 124 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L+++V+ R + ++ GE A+ H P L Y V S F ++ Sbjct: 125 LDVEVQSSARLAD-IKGGEADVALRFGHGRYPGLSCRLLMKDWYYPVCSPEFIARH--AL 181 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 V+ + L P++ + D++ Q + + + + S + A G + Sbjct: 182 VSPAQLTGLPLLRSN--DELWQPWFGAAGVVVEEPQRGAVFDDSSLMLMAAASGQGVALA 239 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTD 284 H +LASG L + Y+ V Sbjct: 240 RHTLAVDDLASGRLRRPFAMAIESPFSYFFVCRLADEQHAAVVA 283 >UniRef50_Q2CH16 Probable transcription regulator protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CH16_9RHOB Length = 296 Score = 163 bits (414), Expect = 5e-39, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 106/296 (35%), Gaps = 5/296 (1%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPT 60 + P L+ +A R F+RAA++L +T +AVS +IK LE+ G L R +PT Sbjct: 4 RLPPLTALRTFEAAARHESFKRAAEELHVTNAAVSHQIKTLEDKLGLSLFRRRGRAVQPT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 + ++ L Q E + Q L +AV +LP L+ A P Sbjct: 64 DAAKRFAGRLAQAFDTIEAATMELQGNPMSGTLRIAVTPFYGNRIVLPRLSRFHALYP-E 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + ++ E T+ + ++ GA+ P + L V++ + Sbjct: 123 IRVEPEMS-ETRINFAKTDLDGALRYGTGNWPGLTAIAMHEDQLLPVAAPTVVSRR-DLP 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 ++ + + + + D +D A+ + S S V LA G + Sbjct: 181 LSAAEIAQLTLGYIDGQEDDWSAWFEMMGYEGVASTQMIGYGSRARVVDLAFSGHGVALA 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 ++ +G L+ L W P++ A D+ + Q Sbjct: 241 DRRLTAADVTAGHLVRLNDTPVSTGRGIW-LVYPDTEFPDPRLMAFGDWFRTEIGQ 295 >UniRef50_B6BBP1 Transcriptional regulator n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BBP1_9RHOB Length = 294 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 67/298 (22%), Positives = 109/298 (36%), Gaps = 13/298 (4%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQGQ 64 + ++ V R AA KL ++ + V QRI LE+ LL RT + T GQ Sbjct: 4 FTAMRTFVEVARAGSMNAAALKLKVSNALVGQRIAGLEDHLQARLLNRTTRQQSLTAFGQ 63 Query: 65 KLLALLRQVELL--EEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 L + + L E +Q L + + L+PAL +P + Sbjct: 64 VYLEQCQDILELVSISEGKASDQQQHLQGRLRITAPVSFGSAALMPALKKFTQAAP-EVE 122 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 +++ R ++ L G GA I S + KL + +S + F T Sbjct: 123 IELFLSDRNEDLLAEG-YDGAFRIGQLEDSSLMQIKLAPYKMVVCASPEYLADGF-EPQT 180 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 S L + V F F + + + VNS +A + A+ G M+P Sbjct: 181 PSDLNRFRAVLFSKTGRKPWRFARGSEAIDWAPKAAVSVNSGQAVLSAAKAGMGIAMVPE 240 Query: 243 LQIEKELASGELIDLTPGLF---QRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 + ++ASG L L PG Q L +HR R + A +++ + Sbjct: 241 VLAHGDIASGTLAQLLPGWSLPEQPMALVFHR----DRYRPQRLQAFIEFARSAFSPE 294 >UniRef50_A3JQF3 Transcriptional regulator, LysR family protein n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JQF3_9RHOB Length = 305 Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats. Identities = 73/283 (25%), Positives = 117/283 (41%), Gaps = 8/283 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPT 60 + ++ L+A VI F AA L TQ +S RI LE G PLL+R + P R T Sbjct: 4 SQITFKQLEAFTFVIDAGTFRAAATALGTTQPNISARIAALETALGAPLLIRDSGPVRLT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGS-TPLLLSLAVNADSLATWLLPALAPVLADSP- 118 E G+KLL R+V E + + L L V TWL L + P Sbjct: 64 EHGEKLLKKAREVLWAGEALIQEAGRQELIDETLRLGVTELVACTWLQDFLRLMRETYPN 123 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 IR+ L+V+ T RL +G++ A+ + + LG +Y + +++ A + Sbjct: 124 IRIQLEVDLATEIDARLMQGQLDLALQSGPFKSTTFANEALGHENYCWFANRMLAGQ-ID 182 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSE--AFVQLARQGTT 236 T + L + ++ H G IV+SS A V + +G Sbjct: 183 GKPTLADLFELTILT--HAKHTQACAALHLMAEKNGLRRERIVHSSALSACVPMVLEGLG 240 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMM 279 ++P ++ ELASG+L + + + R+AP + Sbjct: 241 VALLPERLLKPELASGDLHKIEMDWLPDPLSFHARYAPTRAAL 283 >UniRef50_C6QF64 Transcriptional regulator, LysR family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QF64_9RHIZ Length = 305 Score = 163 bits (412), Expect = 7e-39, Method: Composition-based stats. Identities = 61/290 (21%), Positives = 116/290 (40%), Gaps = 12/290 (4%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQG- 63 + A V+ + AA++L +T+SAVS+ + +LE G LL RT PTE G Sbjct: 4 LEAMNAFAKVVASGSYAEAARRLNLTRSAVSKAVMELEQALGARLLDRTTRRVTPTEAGL 63 Query: 64 ---QKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 ++ LA+L QV+ E E +L + +L A+A + Sbjct: 64 AYYERCLAILAQVD--ETEAQISRLHDEPKGVLKVNAPMSFGTLYLGDAVADFMIRYS-D 120 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L +++ R + L G V V I S + ++ + V+S + + + Sbjct: 121 LKVELTLTDRFIDPLEEG-VDVTVRIGAMVDSSLIARRISPARIVLVASPDYLKAHGTPQ 179 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFL-QQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 + S L + +++ H+ M + L + + C N+ + + A +G + Sbjct: 180 -SPSDLAEHRCLSYGHMTSMQRWHLTDKGKPVSVAIGACLSSNNGDVLREAALKGIGIAL 238 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDY 289 +P K++A+ L + P + +AP R + T +D+ Sbjct: 239 LPTFIAGKDIAAKRLQIVLPENQPDDLTIHALYAPN-RYLAAKTRVFIDF 287 >UniRef50_C6BDS6 Transcriptional regulator, LysR family n=3 Tax=Ralstonia RepID=C6BDS6_RALP1 Length = 308 Score = 163 bits (412), Expect = 8e-39, Method: Composition-based stats. Identities = 60/296 (20%), Positives = 105/296 (35%), Gaps = 11/296 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLL-VRTVPPRPT 60 + P L+ + R F RAA +LC+T +AVS +IKQLE+ G+ L R T Sbjct: 4 RLPPLNALRVFEVAGRHLSFSRAADELCVTNAAVSHQIKQLEDHLGKKLFARRNNQLTLT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 + G L +R E+ D + L +AV A WL+P L P Sbjct: 64 DAGDNYLPRVRDALRALEQAT-DLLMDTADAPLRVAVPPTFGAKWLVPRLYRFFNQHP-- 120 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPF-AEKYFPN 179 V E T + G+ + + P+ V+ + D+ V + A P Sbjct: 121 ---HVRVEVSTADVQDHGQFDLCIDDRQVNAPNLRVEWFTSTDFFPVCNATLQAAIRMPQ 177 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 + LL + +L + + + + +Q A G + Sbjct: 178 DLAAQTLLHERGGRHLAHHPTWRQWLDEVGVAHIDATRGPAFSEALMALQAAIDGQGVAL 237 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRM---MRKVTDALLDYGHK 292 + +E ++A+G L+ R+ Y+ ++ L+D + Sbjct: 238 GQGILVEYDIAAGRLMRPLATEASLRLSYYLIHPHQAAEHAGFAPFRQWLVDEVAR 293 >UniRef50_C3KRQ9 Transcriptional regulator, LysR family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KRQ9_RHISN Length = 302 Score = 163 bits (412), Expect = 8e-39, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 99/291 (34%), Gaps = 6/291 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTE 61 P + L+A +AV R F RA ++L ITQSAVS IKQLE G L VR T Sbjct: 7 MPPLQALRAFEAVGRLLSFRRAGEELLITQSAVSHHIKQLEETLGVRLFVRKAKSIELTP 66 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G L + + + + + + ++V A WL+ LA + P + Sbjct: 67 AGSAYLDKTVEAFGIIADATSEMRRQVARQRVRVSVLPSFAANWLVSRLAGFMLKHP-EI 125 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 ++++ R + G V A+ + L + V S G Sbjct: 126 EVELDPTLRLADFAADG-VDLAIRFGSGQSEGIRAEWLMNEELSPVVSLTLYGDGSRFGE 184 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 LL+ + + + + + +Q A G + Sbjct: 185 PGDLLLQT---LLESWNPVGWELWLGEVGIDIRRARVLQLTDYNIVLQAALNGQGVAIGR 241 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHK 292 + LA+G LI P + + + P+ R + + + + Sbjct: 242 MHMVRDHLAAGRLIQPFPQTVRSEKIAYWLVMPQDRRLSAGAETFASWLKE 292 >UniRef50_A1B0V2 Transcriptional regulator, LysR family n=2 Tax=cellular organisms RepID=A1B0V2_PARDP Length = 317 Score = 163 bits (412), Expect = 8e-39, Method: Composition-based stats. Identities = 57/300 (19%), Positives = 108/300 (36%), Gaps = 12/300 (4%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTE 61 P L+A + R F RAA +L ITQS +S+ ++ +E+M G L RT TE Sbjct: 18 LPSVSALRAFVMAAQFRSFSRAADELDITQSGISRAVRSIEDMAGTQLFERTGHGLVLTE 77 Query: 62 QGQKLLALLRQVE-LLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G + + L L L++A WL P + +A +P Sbjct: 78 PGSVYYDEITSILSELGAATLRLSTYAEAADQLTIATLPSLGGRWLAPRIGRFIAQNP-- 135 Query: 121 LNLQVEDETRTQERLRRG-EVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 ++V + G + A+ ++ CL + L + + P Sbjct: 136 -AIEVSITAQIGHFDFEGSSIDAAIHYGNEVWAGCLSEMLMDEVLIPFCAPALLRGTVPQ 194 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 LL P++ H + + ++ P + ++ A+ G + Sbjct: 195 ---ARLLLDLPLIQHLHRPTAWREWFREVGIEHPNPTRGMRFEQYQMGIEAAKTGLGAIL 251 Query: 240 IPHLQIEKELASGELIDL--TP-GLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 +P + +E+ +G+L+ L P R L + + ++K + + L+Q Sbjct: 252 MPPFMVSEEIQNGQLVALHNLPVASPWRYYLVYPKAKRSKPAVQKFRSWIRAEARRSLQQ 311 >UniRef50_A0NTX9 LysR family transcriptional regulatory protein n=3 Tax=Proteobacteria RepID=A0NTX9_9RHOB Length = 342 Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats. Identities = 60/289 (20%), Positives = 105/289 (36%), Gaps = 11/289 (3%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQGQ 64 +L ++ F AA+ L I+Q AVSQ+++ LE+ G LL RT TE G+ Sbjct: 19 LSSLSGFVQAVKFGSFSAAAKHLGISQPAVSQQVRALEDELGIRLLNRTTRQLSLTEAGE 78 Query: 65 KLLALLRQVELLEEEWLGDEQT--GSTPLLLSLAVNADSLATWLLPALAPVLADSP-IRL 121 + A R + E Q+ LS+ + T L L D P I L Sbjct: 79 RYYAYARDILERLAEADRSVQSEEAQMSGPLSVGLPLGFAETVLSDFLIRFKLDHPGILL 138 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 ++ + D+ + + + A+ + +V +LG V+S + +K Sbjct: 139 DVSLSDQFV---DVIQQRLDVAIRMGDIEDDRLIVRRLGLAQRCLVASPDYLDKR-GRPA 194 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFD--LPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 L + + ++ + L P +VN+S + A G + Sbjct: 195 HPDDLKDHDYLLYKNISTGTRVPFISPVGEKLSVKISPTMLVNNSSTLRRAAMAGLGIAL 254 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLD 288 I+ L +G+L + P Q H P +R + +D Sbjct: 255 SNRWLIDPFLRTGDLEVVLPQW-QYPPHPVHAVYPSNRFIPLKVRRFVD 302 >UniRef50_Q1GID9 Transcriptional regulator, LysR family n=5 Tax=Rhodobacteraceae RepID=Q1GID9_SILST Length = 295 Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats. Identities = 71/298 (23%), Positives = 115/298 (38%), Gaps = 16/298 (5%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P L+A DA R F AAQ+L +T SAVS +++ LE G L VR T Sbjct: 5 LPPLPWLRAFDASARLGNFTLAAQELGLTPSAVSYQVRGLEATLGHKLFVRKQKSLFLTR 64 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IR 120 GQ L ++ + E + S ++L + WL P L+ A P R Sbjct: 65 LGQAYLPVVSKAFGDLEATTSNLFGKSAAQEITLRCLSSLNMLWLAPRLSRFQAQHPDCR 124 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L + T E L ++ + + + V +L + L V + G Sbjct: 125 LRVLSALWGETPEAL---QIDIDIRYGNGSWSDGEVTRLMHHEVLAVCAPALHP-----G 176 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 A+ P++ + D F + PP S P V+ S ++LA +G +I Sbjct: 177 PDPQAIASCPLIEVIGVTDTWHHFFALHGLAPPSSGPALKVDQSLIALELATRGMGVALI 236 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRM-----MRKVTDALLDYGHKV 293 + ++ L SG L++ T R ++ PE+R + + D LL + Sbjct: 237 ARVFAQRYLESGALVEATDLALPAREGHY-IVQPEARNHFRPEVAALKDWLLQEAAQT 293 >UniRef50_A6VT77 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6VT77_MARMS Length = 309 Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 104/295 (35%), Gaps = 9/295 (3%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPP 57 M+R P L+ +A +R F +AA++L +TQSAVS++I+ LE + L +R Sbjct: 6 MRRYIPSSTALKCFEASVRHLSFTKAAEELHLTQSAVSRQIRNLEEFLSRDLFIRLNKRL 65 Query: 58 RPTEQGQKLL-ALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLAD 116 T G ++ ++ +E L L+++ + WL+P LA A+ Sbjct: 66 VLTGTGAAYYKEVVPLLDGMENACLRMLHREDEKTTLTISALPTLASYWLMPLLAQFQAE 125 Query: 117 SPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY 176 P + ++ + + P + +L + V S + Sbjct: 126 HPQFQIKVRSLDD--AAKIDPESIDIILHYGGDHWPRAVSYQLMKESVVAVCSPELLSRV 183 Query: 177 FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQ--NFDLPPGSVPCHIVNSSEAFVQLARQG 234 V + F HL A+ L GS ++ A+ Sbjct: 184 GDKAVDAWTVKDVTAFPFLHLSSRINAWPDWMVAQGLESGSFAGASFAHFHMLLEAAKNS 243 Query: 235 TTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDY 289 ++P + E+ L +GEL+ Y + + + +V D+ Sbjct: 244 MGIAIMPTILAERSLRNGELVAPFGKAVSTPHEYLLSYPIDKADLEQVV-IFRDW 297 >UniRef50_A9HF00 Transcriptional regulator protein n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HF00_GLUDA Length = 295 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 62/288 (21%), Positives = 115/288 (39%), Gaps = 9/288 (3%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQGQ 64 L + V F +++ +Q +S+ I LE +G L RT TE G+ Sbjct: 4 LSALHSFVRVAATGSFSAVSRETGASQPTISRHIALLEAHYGATLFARTTRSLMMTEDGR 63 Query: 65 KLLALLRQVELLEE--EWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 LL +V + E E + S L+ L V + L +L P L+ Sbjct: 64 SLLPHAYEVLEILETAETALGRRRASVSGLVRLGVTTAF-GLYTTGRLGELLEQHP-DLS 121 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 +++ + + G + AV + A S + +LG + + V++ + ++ Sbjct: 122 VELIMRDGFGDLVEEG-LDLAVRVGEIAEGSLIARRLGTVKRIAVATPAYLDRRGTPQHP 180 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPC-HIVNSSEAFVQLARQGTTCCMIP 241 R LL P +A+ + H + N + + NSSEA +Q G ++P Sbjct: 181 RD-LLNHPCIAYTYGGTRHDWHFEGNGEESVVAASGPFRANSSEAVLQATLAGMGIGLLP 239 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDY 289 Q+++++ASG L+ L P + ++ R + T +LD+ Sbjct: 240 SFQVDEDVASGRLVRLFPDWTVPELPFYAVHTGP-RTLPLRTRTVLDF 286 >UniRef50_B9JLT3 Transcriptional regulator protein n=2 Tax=Rhizobiales RepID=B9JLT3_AGRRK Length = 314 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 112/298 (37%), Gaps = 10/298 (3%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQ 62 P L +A R R F AA++L ++Q AVS+ IK LE G L R T + Sbjct: 9 PSANYLFVFEAAARRRSFTAAAEELNVSQPAVSKTIKLLEEATGLKLFRREHTRLELTAE 68 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 GQ+L +Q L +T + + ++ + + WLLP L P + Sbjct: 69 GQRLYRETQQAFDHLHMVLTSLRTKHSNDTVRVSFSTSFVQLWLLPRLKDFKVKHP-DIA 127 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 L++E+ +R + L ++ + + P + + V + + ++ P V Sbjct: 128 LRIEESSRDDQDLNEEDIDISARLGAGKWPGIHAWHFVTEEVIPVCNADYLREHGPINV- 186 Query: 183 RSALLKAPVVAFD--HLDDMHQAFLQQNFDLPPGSVPC-HIVNSSEAFVQLARQGTTCCM 239 + LL ++ F+ H + + +P + + + + ++ A G + Sbjct: 187 PADLLNHRLLHFEERHRVRLGWRDWLLHHSVPVARLAQDFVFTDALSSIEAAVLGQGIAL 246 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 + + +G L+ + + + P R + D+ +L QD Sbjct: 247 GWKHLVHDHVQAGRLVYPLDAVHRSGQSIY-LVMPAQRPAKHGAMLFRDW---LLEQD 300 >UniRef50_A5G323 Transcriptional regulator, LysR family n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G323_ACICJ Length = 313 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 101/292 (34%), Gaps = 5/292 (1%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQGQ 64 + V F A+ +Q +S++I LE+ G L+ RT TE GQ Sbjct: 4 LSLINTFIRVAERGSFSAVARDFNTSQPVISRQIAALEDQLGVRLIQRTTRRLSLTEDGQ 63 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSL-ATWLLPALAPVLADSPIRLNL 123 L + V + + + + + +L L A P ++L Sbjct: 64 TYLEHAKAVVDAMDAANASVGSARKTPTGQVRLGVPTAVGLYLAARLPEFFARHP-EISL 122 Query: 124 QVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTR 183 ++ + + G + +SI S + LG + V+S + R Sbjct: 123 DLKMRDGAFDLIEEG-LDLVISIAEATQASVITRVLGTATSVLVASPAYVAARGAPETPR 181 Query: 184 SALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHL 243 L +V D F + + V+SSEA + AR G ++P L Sbjct: 182 DLLKHECIVYTRPGADREWRFARDGVEESVNVQGRFHVDSSEAVRRAARAGLGIALLPRL 241 Query: 244 QIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 ++A+G LI + ++ H P R + T A+LD+ + Sbjct: 242 TTIDDVAAGRLITVLDAFVPMQVKI-HAILPSRRYVPARTRAILDFLREEFE 292 >UniRef50_Q7CZE6 Transcriptional regulator, LysR family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7CZE6_AGRT5 Length = 288 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 105/294 (35%), Gaps = 14/294 (4%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RP 59 M P TL+A ++ R+ F AAQ+L +T +AVSQ ++ LE G L R R Sbjct: 1 MTLPPLATLRAFESAARKASFALAAQELGMTATAVSQHVRNLEAWLGVALFERHARGVRL 60 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP- 118 T G + + + G + + LA +A +L P L A P Sbjct: 61 TPAGMEFGNTVSGSLRQIASGAERIRRGHDRMTVRLASLPSVVAHFLTPRLPRFRASHPD 120 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 I++++ T ++I H L + + + + P Sbjct: 121 IQVSISYSGAQHTSA--------ADLTIGHGISFGENAVALFSAETRPTCAPSYIASAGP 172 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 ++LL+A ++ D F + LP G+ P I V + G Sbjct: 173 FN-DEASLLRAELLHDDTETAWRDWFAVGDMSLPYGAGP--IFADFNLLVTALKAGQGIG 229 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWH-RFAPESRMMRKVTDALLDYGH 291 + P + KE+A G+L L YW R + R + D L+ Sbjct: 230 LCPTALLRKEIAEGQLTVLFDRAVDTDKYYWLIRPEEMTASARLLADWLVAEAR 283 >UniRef50_C8QAF0 Transcriptional regulator, LysR family n=1 Tax=Pantoea sp. At-9b RepID=C8QAF0_9ENTR Length = 299 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 107/296 (36%), Gaps = 10/296 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 R + L+ A+ + F +AA + IT SA+S ++ E G LL RT TE Sbjct: 5 RATLQELEMFAAIAQHLSFRKAASERNITPSALSHAMRNFEERLGVRLLNRTTRKVALTE 64 Query: 62 QGQKLLALLRQVELLEEEWLGDEQ--TGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 G + L ++ + + + L +++ + A + + P + P Sbjct: 65 AGDRFLQRIQPALQDLAQAVDELNDWRSDPRGSLRISMPRSAEALFFQSLILPFMQRYP- 123 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLG-ALDYLFVSSKPFAEKYFP 178 + L+++ + + G V + G + L V++ F +Y Sbjct: 124 DITLEIDSNDSLLDIVAAG-FDAGVRYGAVLAQDMVAVPFGIPMRALAVATPEFIARYGV 182 Query: 179 NGVTRSALLKAPVVA--FDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 + +ALL P + F F Q +++++E +Q A G Sbjct: 183 PN-SPAALLNFPCIERRFPSGRRYRWEFWQDGQKQEVAVNGSLVLDNNERILQAALAGAG 241 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHK 292 + H + + G+L+++ Q +W + P + + +D+ + Sbjct: 242 IAFLHHGTVMDAIQRGDLVEILSDFTQVEEGFW-LYYPSRKYLSTPLRYFIDWLKE 296 >UniRef50_B8J293 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J293_DESDA Length = 308 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 65/290 (22%), Positives = 110/290 (37%), Gaps = 10/290 (3%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQG 63 + L+ + F +AA+ L +TQ AVS +++ LEN G PL R+ T +G Sbjct: 2 NIDHLKTFHKIAETGNFTQAARDLFLTQPAVSMQVQSLENSLGVPLFDRSRRKVNLTSEG 61 Query: 64 QKLLALLRQVELLEEEWLGDEQTGST--PLLLSLAVNADSLATWLLPALAPVLADSP-IR 120 + L +++ L + + Q+ S L L +A A +L + P + Sbjct: 62 RVLYEYTQRIFSLVNQMQDEFQSLSQLDTGRLVLGASAIMSAYYLPGYMVLFHQRHPGVT 121 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L+L V + E++ RGE+ + P+ L + V+ + A Sbjct: 122 LDLAVHNSHVIAEKVYRGELEIGFCGSSPSHPNLRAHFLHREPLIVVAGRKSALAQKDGP 181 Query: 181 VTRSALLKAPVVAFDHLDD----MHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 V LL P + + + + F + P V++ E QL G Sbjct: 182 VCADDLLAHPFILREQGTRVTNKVQEWF--KTHAGRPERPSFMTVDNMEVAKQLVINGLG 239 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDAL 286 +P ELA+G+L L F + Y + R+ R VT L Sbjct: 240 VTALPRYAAALELAAGQLTQLRLESFDLHVNYSLVYMEGQRLSRTVTHFL 289 >UniRef50_Q0G2U4 Transcriptional regulator, LysR family protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G2U4_9RHIZ Length = 298 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 106/295 (35%), Gaps = 5/295 (1%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPT 60 + P L A DA R GF AA++L +TQ A+S++I+ LE G+PL RT T Sbjct: 7 RLPPLDYLVAFDAAARLGGFTLAAEELNLTQGAISRKIRLLEENLGKPLFFRTHRAVHLT 66 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 + G++ + + + + G +++A WLLP L + + P Sbjct: 67 DAGRRYHRTVVHALESIAKASAEVRQGDLRPRVAIAATQSVSTLWLLPRLNRLRSGLP-G 125 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + +++ +E L G + P L V+ + K Sbjct: 126 IEIELTSSDDDRECLESGS-DLIILRGEGRWPGFEGAMLLNESICPVADPDYIAKRSVRE 184 Query: 181 VTRSALLKAPVVAFDHLDDM-HQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 VA H + + + +L P + N+ + A QG + Sbjct: 185 PRDFLNCTLIDVASHHTEWLDWKGWLSAAGVDEPIEAERILFNTYALAIDAACQGLGVAL 244 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 H I++ + G L+ P + Y+ P R + + + D+ L Sbjct: 245 GWHHLIDRHILEGRLVRPLPLTVETNSGYY-LLHPRGRDLSPAAERISDWLRMAL 298 >UniRef50_B5XWH9 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=B5XWH9_KLEP3 Length = 305 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 64/299 (21%), Positives = 114/299 (38%), Gaps = 19/299 (6%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQG 63 +L + F +AA+ L I+ SAV + + +LE+ G L R+ T +G Sbjct: 3 SLTSLTSFVRTAETLSFVQAARLLGISASAVGKNVARLEHKLGVRLFNRSTRNVSLTAEG 62 Query: 64 QKLL----ALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 L ++L Q++ E E + L +SL V L LLPAL P Sbjct: 63 AAFLTRCQSILEQIQEAESELTSSLSQPTGKLRISLPVIGYRL---LLPALTAFTRLYP- 118 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 ++ L ++ R + G V A+ A + KLG ++ +S + +Y P Sbjct: 119 QVELDLDFSDRLVNLIDEG-VDVAIRSGELADSRLIARKLGGFRFVLCASPAYLAEYGPP 177 Query: 180 GVTRSALLKAPVVAFDHLD-----DMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQG 234 + L + F ++ D SV VN+ EA ++L+ G Sbjct: 178 D-SPKELAAHKCIFFRFPSTGLIQPWELRDMRLTGDFRAASVV--TVNNIEAAIRLSAAG 234 Query: 235 TTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 +P + + + G+L ++ PG + + + P SR + +D+ Sbjct: 235 MGIAYVPDFVVREAMDEGQLQEVLPGCCIKDGHFSVLW-PASRYLSPRIRCFIDFMAAA 292 >UniRef50_C4LDC5 Transcriptional regulator, LysR family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LDC5_TOLAT Length = 339 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 58/299 (19%), Positives = 106/299 (35%), Gaps = 12/299 (4%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQGQ 64 L + R F +AA++L +TQ A+SQRI++LE + L +R T T +G+ Sbjct: 8 LALLHTFEVSARHLSFTKAAEELYLTQGAISQRIRRLEELLRFKLFIRLTRKLMLTPEGE 67 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQ 124 +LL L E + D + +L + + WL+P L L+L Sbjct: 68 QLLLALTSSLQQINEVIEDIRFNELRGMLCIGLPPAFGQLWLMPRLTSFKTTYR-SLDLL 126 Query: 125 VEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRS 184 + V AV + +LP L + V S +A + ++ Sbjct: 127 FYGQ-HGLPNFEAEPVDMAVYYGNASLPHLHSWTLLEEWLVPVCSPEYAASHGLLSTDKT 185 Query: 185 ALLKAPVVA-------FDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 L K ++ F+ + + Q + P S ++ N ++ A+ G Sbjct: 186 DLRKCSLLHCTESLEQFEFGYEWQH-WSQSTGVVLPHSNRKYVFNQHAMALEAAKHGMGL 244 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 M + + GEL+ M Y + + R A + + + + Sbjct: 245 AMGRWFLVMPAVLRGELVMPVDYKIPSGMGY-QLYCSREHVQRPRYQAFAQWLQRTIDE 302 >UniRef50_B7H4B0 LysR substrate binding domain protein n=10 Tax=Gammaproteobacteria RepID=B7H4B0_ACIB3 Length = 303 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 59/296 (19%), Positives = 108/296 (36%), Gaps = 10/296 (3%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP-TEQG 63 + + V+ F +AA++L +T+SA+S+ I +LE+ G L RT T++G Sbjct: 4 ELSAISIFVTVVEAGSFVKAAEQLHLTRSAISKNIARLEDQLGVALFKRTTRSLSMTDEG 63 Query: 64 QKLLALLRQV--ELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 R+ E+ L D++ + L ++V + P + L Sbjct: 64 ALFYEHSRRALSEIQNAAALLDQRKINATGRLRMSVPVLFGQLFAAPLMVKFAQQHA-DL 122 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPS-CLVDKLGALDYLFVSSKPFAEKYFPNG 180 L++ R + + G + I + + +G L +S + K P Sbjct: 123 QLEISFNDRNVDLIEEG-FDLCIRIGALPDTTQLVAKPIGEHRMLLCASPDYLNKAGPVE 181 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVP--CHIVNSSEAFVQLARQGTTCC 238 L + +A H M + LQ+ D P P ++N +A A Sbjct: 182 -HIEDLDQHATIADPHFGQMQKWRLQKENDEPLFIKPKAKLLLNDLQAIKNAALADAGIA 240 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 +P I+ EL G+L+ + + + P M T +DY + L Sbjct: 241 WLPDWLIQNELQDGKLVQVLDAMSSTAFPIHLVW-PTLPFMPLKTRLAIDYLAQHL 295 >UniRef50_Q1QZK3 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZK3_CHRSD Length = 294 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 64/290 (22%), Positives = 104/290 (35%), Gaps = 14/290 (4%) Query: 8 TLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQGQKL 66 LQ+ AV R AA++L +T SAVS R++QLE G LL RT T +GQ+ Sbjct: 6 HLQSFLAVARTGSLTLAAEELHVTPSAVSHRLRQLEQRLGAKLLRRTPHGMALTGEGQRF 65 Query: 67 LALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVE 126 + E L E P L+++V ++WL+P L P +++E Sbjct: 66 KDRISDPIEAIEMALRPETGQEGP--LTVSVMPWFASSWLMPRLKRFQLRCP-DARIRIE 122 Query: 127 DETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSAL 186 ++ + L G V A+ P V+ L + V+S + N + Sbjct: 123 TSSQLSD-LAHGHVTAALRFGRGDWPDIEVEPLFDEWVIPVASPDVVAQMGSNAQDPARW 181 Query: 187 LKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIE 246 + P D D F + ++ + + + A G + + + Sbjct: 182 PRLP----DPDDLWSSWFGDEVMG--EAMRSSIELHDTSSLTEAAVNGMGVVLGRYTHVA 235 Query: 247 KELASGELIDLTPGL---FQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 L G+L+ L +R L R P L D K Sbjct: 236 PWLERGDLVTLASQWIRMPKRHYLVRSRHRPMHSCFPHFRRWLHDEVKKY 285 >UniRef50_C7QF45 Transcriptional regulator, LysR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QF45_CATAD Length = 307 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 65/299 (21%), Positives = 115/299 (38%), Gaps = 9/299 (3%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RP 59 M + + L V+ GF AAQKL ++Q +VS ++ LE L+ R+ P RP Sbjct: 1 MTQLNLHRLSIFLTVVETGGFSAAAQKLYMSQPSVSNHVRNLEQSLQTTLIDRSGPRIRP 60 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADS-LATWLLPAL-APVLADS 117 T +G+ L R++ LL EE + + S L V + + T+LLP L A Sbjct: 61 TAEGEVLAEYARRIFLLTEEAVAAIREVSGVQSGRLEVGGTTTVGTYLLPRLLARFRERH 120 Query: 118 -PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY 176 I ++ V + + +RL GE+ A+ A P + + L V++ + Sbjct: 121 QNIECDIVVGNNGQILKRLLDGELGLAIVAGQPAAPQLKTETVLDERLLLVAAPGHPLTH 180 Query: 177 FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 +T L + + + +P + E Q G Sbjct: 181 PTPHITAPQLAGERFLLREPGSQTRDLQEAALINWDLDDMPKADMWGPETIKQSVAAGLG 240 Query: 237 CCMIPHLQIEKELASGEL--IDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 +I I+ E+ G L +++ P L R ++ +R R++ A + + Sbjct: 241 ISLISEHAIDTEVKDGRLAVLEVDPPLRSRPVVIAYR---RDRLLSPAERAFVALARGL 296 >UniRef50_A6SUS7 Transcriptional regulator n=3 Tax=Proteobacteria RepID=A6SUS7_JANMA Length = 298 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 59/277 (21%), Positives = 100/277 (36%), Gaps = 6/277 (2%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-P 59 ++ P L A +A R F AA++LCIT SA S RI+ LE G+ L +R Sbjct: 3 IRLPPVHALSAFEAAARHGSFAIAAEELCITPSAFSHRIRLLEEFVGERLFLRDGRSVSL 62 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 TE G++ L ++R ++ + + + V LP LA A P Sbjct: 63 TEFGRRYLDVVRDALRSLADFPLPHRHPLAQPRVKITVPPTFARYLFLPHLADFTALYP- 121 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 + ++V + E + P +KL V S + EK Sbjct: 122 DITIEVFLSVPLYDMALS-ETDLEIRFGAGKYPDTTTEKLFEEPVFPVVSPAYLEK-IGG 179 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 T + L KA ++ L+ F D P ++ ++ R G + Sbjct: 180 LKTPADLQKAQLLR-SALEPWQAWFEVAGLD-WPEPATGLRIDDLGLLLEAVRHGYGVAL 237 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPES 276 E+ +A+GE++ L ++ +S Sbjct: 238 TRKHFAEEMIANGEVVPLFDIQLTTPQHAYYMVYEQS 274 >UniRef50_Q0K5L3 Transcriptional regulator, LysR-family n=5 Tax=Burkholderiales RepID=Q0K5L3_RALEH Length = 304 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 66/294 (22%), Positives = 106/294 (36%), Gaps = 9/294 (3%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRPTEQGQKLL 67 L A R F RAA +LC+TQ A+S+ I +LE FGQPLL R T+ G+KLL Sbjct: 4 LHAFATAARLGSFTRAADELCVTQGAISRAIARLEAHFGQPLLQRNAHRLVLTDAGRKLL 63 Query: 68 ALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IRLNLQVE 126 + + E + G+ L+L+V + WL+P L P IRL+ Sbjct: 64 EAVAEPLATIEHASATLRAGNRRHHLTLSVVPTLASVWLVPRLPDFHRRHPEIRLDFVPY 123 Query: 127 DETRTQERLRRGEVVGAVSIQ-HQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV--TR 183 E L A+ P D + + + V A G + Sbjct: 124 QRD---EDLSGPSPDAAILAGEAGKWPGLQADYVVGRELVPVCHPDRARARREAGRWQSP 180 Query: 184 SALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHL 243 + LL P++ Q +LQ + +Q R ++ Sbjct: 181 AELLDEPLLYHTTAPANWQNWLQAAGVPNAAPRLSTAFDQVSILIQAVRADIGVAVLQRC 240 Query: 244 QIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 + E+A+G + + Y+ AP+ R + D+ + +D Sbjct: 241 LVRDEIAAGRVTAPFDLPITLQRGYFLC-APKERRDHPALNCFRDWLLETAAKD 293 >UniRef50_P24734 HTH-type transcriptional activator ampR n=112 Tax=Bacteria RepID=AMPR_PSEAE Length = 296 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 59/254 (23%), Positives = 96/254 (37%), Gaps = 9/254 (3%) Query: 1 MKRP--DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP- 57 M RP L+A +A R F RAA +LC+TQ+AVS ++K LE G L R Sbjct: 1 MVRPHLPLNALRAFEASARHLSFTRAAIELCVTQAAVSHQVKSLEERLGVALFKRLPRGL 60 Query: 58 RPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 T +G+ LL +L L + G +L++ WLLP L A Sbjct: 61 MLTHEGESLLPVLCDSFDRIAGLLERFEGGHYRDVLTVGAVGTFTVGWLLPRLEDFQARH 120 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 P ++L++ + G + A+ A L + A + Sbjct: 121 PF-IDLRLSTHNNRVDIAAEG-LDYAIRFGGGAWHGTEALALFEAPLTVLCCPEVAAQLH 178 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 + + LL+ ++ D+ F + ++S A ++ ARQG Sbjct: 179 ----SPADLLQHTLLRSYRADEWPLWFQAAGLPAHAPLTRSIVFDTSLAMLEAARQGVGV 234 Query: 238 CMIPHLQIEKELAS 251 + P ++LAS Sbjct: 235 ALAPAAMFARQLAS 248 >UniRef50_Q1GMA2 Transcriptional regulator, LysR family n=2 Tax=Rhodobacteraceae RepID=Q1GMA2_SILST Length = 305 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 60/286 (20%), Positives = 111/286 (38%), Gaps = 8/286 (2%) Query: 13 DAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQGQKLLALLR 71 AV +GF AA++L +++SAVS+RI Q+EN G L R+ TE G+ + Sbjct: 11 VAVAETQGFAAAARRLGVSKSAVSKRITQIENRLGAQLFHRSTRNVSLTEAGEHFYSHAV 70 Query: 72 QVELLEEEWLGD--EQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVEDET 129 + + +E + L + V + P ++ LA P +++ + + Sbjct: 71 RAQEAAQEAEDSVLALQEAPKGRLRVNVPMAFGRLHVAPLISGFLARYP-GVSIDMVMDD 129 Query: 130 RTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSALLKA 189 R + G A+ A + + K+ AL + V++ + ++ T S L Sbjct: 130 RMVDLFADG-FDLALRGGTLADSALVARKIAALRNVLVAAPTYLARHGAPQ-TVSDLRFH 187 Query: 190 PVVAFDHLDDMHQAFLQQNFDLPPGSVP-CHIVNSSEAFVQLARQGTTCCMIPHLQIEKE 248 + + D + + + VN+ EA + GT +P + Sbjct: 188 NCLQYSFSRDFQEWVFDCDGKAETFRPSGSYSVNNGEALREAVLGGTGIGRLPTFTAGPD 247 Query: 249 LASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 LASG L+ + P + + PE R + +DY + L Sbjct: 248 LASGRLVRVLPQCQLPSQTLYAIY-PERRYLPTKVRVFIDYLLEHL 292 >UniRef50_A3X9D4 Transcriptional regulator n=3 Tax=Rhodobacterales RepID=A3X9D4_9RHOB Length = 308 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 57/268 (21%), Positives = 92/268 (34%), Gaps = 9/268 (3%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQ 62 P + L+A +A R F AA +LC+T +A+S +++ LE G L R P T Sbjct: 5 PPLQWLRAFEAASRNGNFASAANELCLTPAAISHQVRSLEEHLGYQLFSRRKRPMELTTM 64 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IRL 121 GQ L + + D + + WLL L A P I+L Sbjct: 65 GQLYLPWVIKSFETLRLGTRDVFGARDTRPVRIRCLPTFAQLWLLKELPDFRARFPQIKL 124 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 L + ++ ++ + P + + V G Sbjct: 125 QLHMGTWAS---AVQSDQLDVEIRFGDGDWPGLRSILISRDPVVPVCHPNL---QLARGE 178 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 T AL +P++ + D F Q PP V+ S A +++A G ++ Sbjct: 179 TLLALKDSPLIEIIGVADTWHQFFLQENLSPPTQGAALNVDQSIAALEMAASGLGHALVS 238 Query: 242 HLQIEKELASGELID-LTPGLFQRRMLY 268 L L G L+ L L +Y Sbjct: 239 GLFAAPYLDDGRLVPSLALELHTDHAIY 266 >UniRef50_A8GEV9 Transcriptional regulator, LysR family n=22 Tax=Proteobacteria RepID=A8GEV9_SERP5 Length = 328 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 53/292 (18%), Positives = 102/292 (34%), Gaps = 11/292 (3%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQ 62 P R ++A +A+ R AA++L I+ SAVS ++K LE PL R + Sbjct: 41 PPLRAVRAFEAIARLGSITAAAKELAISPSAVSHQLKTLEAFLQMPLTERQGRNLILRNE 100 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IRL 121 G+ +R + + + S +++++ W +P L L ++P I + Sbjct: 101 GRDYYRSIRSAFNVLRQATEQVREQSASRQVTISLIPLFGMGWFIPRLHGFLRENPDIDI 160 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 N+ + ++ +KL + + V S+ F + + Sbjct: 161 NVVYANHRNYL----SDAADISIRFGTGQWSGYHSEKLMSGKMVPVCSRGFIKVHGLLD- 215 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 T L P++ + Q F Q P + + + G C ++ Sbjct: 216 TPDQLSPLPLLHDEERTTWMQWF-QLAGVRRPLRSTGPMFEDGLLTLAAVQAGLGCALMR 274 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRK---VTDALLDYG 290 I L+SGEL+ L Y+ + + + + LL Sbjct: 275 EPLIAPYLSSGELVKLFDLAIDDGRDYYLCVRQNTELSPEGLNLQRWLLKEA 326 >UniRef50_B1G1M3 Transcriptional regulator, LysR family n=1 Tax=Burkholderia graminis C4D1M RepID=B1G1M3_9BURK Length = 321 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 106/298 (35%), Gaps = 7/298 (2%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQ 62 P ++L A +A R F RAAQ+L +TQ+A+S +IK LE+ L VR T Sbjct: 6 PSLQSLLAFEAASRHLSFTRAAQELELTQTAISHQIKTLEDRLEVKLFVRRRNVLTLTPA 65 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 ++ L + + L + +L++ L+PAL P + Sbjct: 66 AREYLDSVHEAINLLSIATAHARKKKPSTVLTVTCLPTYAVKCLIPALPEFQRAHP-DIT 124 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 + V + E R A+ S D+L ++ V S E+ G Sbjct: 125 VHVATSSTFNE-FDRNSYDVAIRYGSGRWASARSDRLHGEEFFPVCSPAVLEEAGKFGSV 183 Query: 183 RSALLKAPVVA---FDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 L + + + D A+L+ P + + + A G + Sbjct: 184 AEVLARMRQIRTYFYSMYQDDWPAWLEAAVHEPVEFAGESVFHLQLTSLAAAVDGVGIAI 243 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 + +LASG+L+ Y+ +P + K +A ++ L ++ Sbjct: 244 GRTPLVNGDLASGKLVAPFDVRVPSNSAYF-VSSPTDKARTKKVEAFREWALARLGEN 300 >UniRef50_B5ZZ47 Transcriptional regulator, LysR family n=4 Tax=Rhizobium RepID=B5ZZ47_RHILW Length = 312 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 107/299 (35%), Gaps = 10/299 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTE 61 P L +A R F AA +L +T AVS++IK +E G L +RT T Sbjct: 8 LPSLTALATFEASARHGNFTLAAAELNVTTGAVSRQIKSIEQELGVALFLRTGKGVMLTA 67 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS-PIR 120 + L L E + + G++ +++A + WL+P + I Sbjct: 68 PAEDLYRALATGFARASEVVNSIKQGNSARNVTIACSDVFGTMWLIPRMPDFWRRFTDIS 127 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 ++ + D +T R ++ + + L V S FAEK+ G Sbjct: 128 VDHLIGDNFKT---FRPSQLELRIRYGSGKWIDETAEFLFDDCLYPVCSPGFAEKH--AG 182 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQ--QNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 + + L P++ + ++ + + +P + +Q A Sbjct: 183 ASAADLADLPLLNVEWVEPGWTGWEEVLARGGVPYHAASGRRFGKFSVALQAAMADQGLV 242 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 + H + + G+L+ T + Y+ + +R + +L D+ + ++ Sbjct: 243 VGWHRLVGPLVEKGDLVRFTDLVVPDPGAYYLTWN-STRALPAAALSLRDWIRMLAEEE 300 >UniRef50_A9F8M5 LysR-family transcriptional regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F8M5_SORC5 Length = 311 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 70/292 (23%), Positives = 114/292 (39%), Gaps = 9/292 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPPRPTE 61 P LQA +A R RAA++L +TQ+AVS +I+ LE+ L R+ TE Sbjct: 13 LPSLTALQAFEAAARHSSVTRAARELGVTQAAVSHQIRALEDTLETALFRRSPHGISLTE 72 Query: 62 QGQKLLALLRQVELLEEEWLGDEQ--TGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 G++ A L V E + +S++V A WL+P L L P Sbjct: 73 DGERWAAELGVVFARLREANARLRRPAADARPAVSVSVTPSFGARWLVPRLGQFLVSHP- 131 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 +++++ R + L R V + + P L KL + ++ A K Sbjct: 132 EVDVRISATERLVD-LAREPVDIGIRYGLGSYPGLLTVKLADDALIVAAAPSVASKR--A 188 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 L ++ DH D + F +++ LP + +SS V A +G + Sbjct: 189 RWRVEDLSHEVLLGDDHPDAWGRWFRERSRRLPARVRQSQLTDSS-MLVDAAVRGQGVAL 247 Query: 240 IPHLQIEKELASGELIDLTPGLF-QRRMLYWHRFAPESRMMRKVTDALLDYG 290 EL G L+ L P L L ++ + + + RK A D+ Sbjct: 248 ARWSLAAAELDLGRLVLLFPRLPALPTGLAYYLVSTRASLRRKPVAAFRDWV 299 >UniRef50_P55576 Uncharacterized HTH-type transcriptional regulator y4mQ n=19 Tax=Proteobacteria RepID=Y4MQ_RHISN Length = 298 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 61/294 (20%), Positives = 103/294 (35%), Gaps = 11/294 (3%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQG 63 ++ +A R F AA++L ++ SAVS I +LE G L RT T G Sbjct: 6 SLSAMRIFEAAARLGSFRAAAEELNLSPSAVSHAIMRLERDLGVALFERTTRSVSLTVAG 65 Query: 64 QKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNL 123 Q LL + ++ + + LL L A L P L L ++P + + Sbjct: 66 QTLLNHASNAFEELRRGV-EQISSNKAQLLRLHCAPSFAAQVLSPRLPQFLKENP-GIEV 123 Query: 124 QVEDETRTQERLRRGEVVGAVSIQ-HQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 +V T R G + +V L L + + A + Sbjct: 124 RVAASTN-YARFVDGLFDADIVYGEPLNREDLIVIPLSEEIVLPLCAPDLAH----QIKS 178 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 L P++ D + + N DL P P + S V A G + Sbjct: 179 PRDLFHQPLIRSDLKRIQWIDWFEAN-DLGPPPSPSMSFDRSFLAVDAAVNGLGIALESD 237 Query: 243 LQIEKELASGELIDLTPGLFQRRMLY-WHRFAPESRMMRKVTDALLDYGHKVLR 295 + +EL SG+L+ + + + P+S R++ A D+ + + Sbjct: 238 VLARRELESGKLVRPLHRICRDNRYIGHYLAYPKSGSQRRLARAFADWLTRECQ 291 >UniRef50_C8QG37 Transcriptional regulator, LysR family n=1 Tax=Pantoea sp. At-9b RepID=C8QG37_9ENTR Length = 304 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 106/290 (36%), Gaps = 6/290 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPPRPTE 61 P TL A + V R RAA++L +TQSA S++I QLE M G L RT T Sbjct: 6 LPPLNTLIAFECVARYGNISRAAEELNLTQSATSRQILQLEEMLGCKLFTRTQRRVLLTP 65 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 +G+ +RQ + + +++A + + WL P L+ + + P L Sbjct: 66 RGEAYATQVRQQLSALSHATAEVMGWNGLPQVTIACTSAMGSLWLAPRLSALHGELP-DL 124 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 ++++ + R E A+ +A P L + + F + N Sbjct: 125 QIRMKISDSFADM-RSSEFDLAIFYLREAPPGFQATPLFDEICYPMCAPEFRARLEENAS 183 Query: 182 TRSALLKAPVVAFDHLDDM--HQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 S L ++ D + + L N+ VQ A +G + Sbjct: 184 AESLLHHMLLIQDDPQREWTGWSDWFASQDVLSFVPRQTWRANNYPFLVQAAVRGDGILL 243 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDY 289 ++ L GEL+ G + P+ R ++ + ++ + Sbjct: 244 GWEGLVQDHLNRGELVPAHAGKLAANGKCF-LLIPQDRYLKPIVRHVISW 292 >UniRef50_Q7P212 Glycine cleavage activator protein n=1 Tax=Chromobacterium violaceum RepID=Q7P212_CHRVO Length = 306 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 58/292 (19%), Positives = 100/292 (34%), Gaps = 8/292 (2%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-P 59 MK P L+ F RAA L +TQ A+S+ ++ LE +G L R Sbjct: 1 MKLPPLNALRVFVVAAEHLSFTRAAAALSLTQGAISRHVQTLEEYYGATLFTRQARGLAL 60 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 T +G+ L+ R+ L E + + L + + W+LP LA A P Sbjct: 61 TAEGEALVKPAREAFQLLNEASEALRLRQS--DLRVRMPPTPAMRWVLPNLADFQARHP- 117 Query: 120 RLNLQVEDETRTQERLRRGEVVGAV--SIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 L + + + R E AV +A P ++ + + V S Sbjct: 118 EYTLHLLTQLIHNKPFNRAEYDLAVVGLSSPEAAPDLRLECICREKLIPVCSPSLLAGKH 177 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 P L ++ + Q +L ++ E + A G Sbjct: 178 PLHA-PDDLKHHTLLHPWRDQNTWQRWLTLAGVSGVNPESGVTFDALEYALHAAVAGMGV 236 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDY 289 + + ++L SG L+ + + Y+ + E + KV A D+ Sbjct: 237 TLAQASMVTQDLDSGRLVIPFDTVLETEWAYYLVYPHELAELPKV-RAFRDW 287 >UniRef50_P77333 Uncharacterized HTH-type transcriptional regulator ycjZ n=57 Tax=cellular organisms RepID=YCJZ_ECOLI Length = 299 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 113/295 (38%), Gaps = 11/295 (3%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRP 59 MKR + L A V ER F RAA +L + QSA+SQ ++++E G LL RT P Sbjct: 1 MKREEIADLMAFVVVAEERSFTRAAARLSMAQSALSQIVRRIEERLGLRLLTRTTRSVVP 60 Query: 60 TEQGQKLLALLRQVELLEEEWLG--DEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 TE G+ LL++L + + + + + + + T LLPA+ L Sbjct: 61 TEAGEHLLSVLGPMLHDIDSAMASLSDLQNRPSGTIRITTVEHAAKTILLPAMRTFLKSH 120 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGA-LDYLFVSSKPFAEKY 176 P +++Q+ + + + V + + + ++G + V S + + Sbjct: 121 P-EIDIQLTIDYGLTDVVSE-RFDAGVRLGGEMDKDMIAIRIGPDIPMAIVGSPDYFSRR 178 Query: 177 FPNGVTRSALLKAPVVAF---DHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQ 233 + S L+ + ++ ++ ++N+ + + A Sbjct: 179 -SVPTSVSQLIDHQAINLYLPTSGTANRWRLIRGGREVRVRMEGQLLLNTIDLIIDAAID 237 Query: 234 GTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLD 288 G +P+ Q+E+ + +LI + Y H + P R +D Sbjct: 238 GHGLAYLPYDQVERAIKEKKLIRVLDKFTPDLPGY-HLYYPHRRHAGSAFSLFID 291 >UniRef50_A5VAW9 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VAW9_SPHWW Length = 320 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 59/296 (19%), Positives = 103/296 (34%), Gaps = 9/296 (3%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQG 63 + L+ AV+ F Q+L + S VS+ I LE G L VR+ TE G Sbjct: 21 NLALLRVFVAVVETGNFSHTGQRLRVVPSTVSKHISALEKRLGGQLFVRSTQKLGVTELG 80 Query: 64 QKLLALLRQVELLEEEWLGDEQT--GSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 +L + E D +L +A L P L L +P ++ Sbjct: 81 LRLYDHALAILQDVEAAEIDISEYNSEPQGILKIAAGTVFAQRHLAPILIRFLEANP-KV 139 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +L V T + + G + A+ I P + KL L+ ++ + + Sbjct: 140 SLDVSLSTTSNHLISDG-IDVAIRISDALDPGLIAVKLAPNIRLYCAAPAYLAREGT-PA 197 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLP--PGSVPCHIVNSSEAFVQLARQGTTCCM 239 S L + + + Q ++ + ++ + +Q G Sbjct: 198 RASDLARHNCLVVRGVAQSAQWPIKGETGATEFIAVSGNFVADNVDLLLQAVVAGVGIGH 257 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 +P + LASG+L+++ P + PE R M T A +D+ R Sbjct: 258 LPLFMVYDLLASGDLVEIFPDSRAVASHIYA-VFPERRNMPLKTRAFIDHLKAEFR 312 >UniRef50_A0P0B3 Transcriptional regulator n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P0B3_9RHOB Length = 309 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 70/292 (23%), Positives = 113/292 (38%), Gaps = 12/292 (4%) Query: 12 LDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQGQKLLALL 70 L+A+ E F RAA L + QSAVS RIK LE G L RT PTE G+ + A Sbjct: 18 LNAIAEEGNFSRAAVALGLEQSAVSHRIKSLEAALGIRLFERTTRRIVPTEAGRIVCAAA 77 Query: 71 RQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVEDETR 130 ++ + + + L T + L+V++ W++PAL A L+L V+ E R Sbjct: 78 KRCQEVWDSALSRIADVRTSRTIRLSVSSSLAMKWVIPALHRAQAAG---LDLVVDVEDR 134 Query: 131 TQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSALLKAP 190 + L GE A+ P + L + V+ + G +ALL Sbjct: 135 LVD-LHAGEAQAAIRYGAGPYPGFHAEALLTAHLVPVARPGLLKGQMTPGGPGAALLADR 193 Query: 191 VVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIEKELA 250 D + + + P + P ++ +Q A G + L +E ++ Sbjct: 194 AGMSDGTGFSWNDYFKGRNWMEPPARPLSSFARADLAIQAAISGMGVALGRTLLVENDIE 253 Query: 251 SGELIDLTPGLFQRRMLYWHRFAPE---SRMMRKVTDAL---LDYGHKVLRQ 296 +G L ++ R YW P + R + L ++ RQ Sbjct: 254 AGFL-EVVGEPVASRSKYWLVTTPAYAGTEGYRDLRAWLGSEVEMARAQFRQ 304 >UniRef50_Q1GH77 Transcriptional regulator, LysR family n=18 Tax=Rhodobacterales RepID=Q1GH77_SILST Length = 310 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 107/294 (36%), Gaps = 10/294 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P +L+AL+AV R AA +L +TQ AVS++++ LE G L++R T Sbjct: 15 LPSIASLRALEAVDRLGSASAAAVELSLTQGAVSRQLQALERQLGIELVLRDGKALSLTP 74 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 +R + Q+ L+LA+ WL+P L P Sbjct: 75 DATDYAQEVRHALDRIAQATLQVQSVPLAGSLNLAILPAFGMRWLMPRLPAFSRRHP--- 131 Query: 122 NLQVEDETRTQE-RLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 ++ + TR A+ H P L L V + ++ + Sbjct: 132 DVTINMSTRLSPFNFATQSFDAALHFGHADWPGTDSLLLKHEQLLPVCAPELVKRAKVD- 190 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 +L P++ + Q+ G++ + + Q A G ++ Sbjct: 191 -APGDILALPLLHIQTRPTAWADWFQRQQVPTSGTLGGSMYDQFSTINQAALHGLGVALM 249 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRF-APESRM--MRKVTDALLDYGH 291 P +E++LA+G L+ L P Y+ + +SR ++K D L + Sbjct: 250 PDYLVEQDLATGRLVSLHPVPEDIGGAYYLVWPTSKSRHSGLQKFRDWLAEQAQ 303 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B3R274 Transcriptional regulator of glycine cleavage sy... 318 1e-85 UniRef50_A8TN53 Transcriptional regulator, LysR family protein n... 317 3e-85 UniRef50_D0J1E9 Transcriptional regulator, LysR family n=1 Tax=C... 307 2e-82 UniRef50_A7FFF5 Glycine cleavage system transcriptional activato... 307 4e-82 UniRef50_P0A9F8 Glycine cleavage system transcriptional activato... 306 8e-82 UniRef50_A6VVZ6 Transcriptional regulator, LysR family n=3 Tax=G... 301 2e-80 UniRef50_Q2CJD7 Putative uncharacterized protein n=1 Tax=Oceanic... 299 7e-80 UniRef50_Q210B4 Transcriptional regulator, LysR family n=7 Tax=P... 297 2e-79 UniRef50_A7HSK5 Transcriptional regulator, LysR family n=2 Tax=B... 292 9e-78 UniRef50_A6WYX4 Transcriptional regulator, LysR family n=38 Tax=... 291 3e-77 UniRef50_A7FF10 Chromosome initiation inhibitor n=169 Tax=Gammap... 290 3e-77 UniRef50_Q5DYL0 Transcriptional regulator, LysR family n=2 Tax=V... 288 1e-76 UniRef50_A4JTI2 Transcriptional regulator, LysR family n=15 Tax=... 288 2e-76 UniRef50_B7RUK1 LysR substrate binding domain protein n=1 Tax=ma... 286 5e-76 UniRef50_B9JKI0 Transcriptional regulator protein (Activator) n=... 286 9e-76 UniRef50_C5D189 Transcriptional regulator, LysR family n=4 Tax=P... 285 1e-75 UniRef50_P45099 Glycine cleavage system transcriptional activato... 285 2e-75 UniRef50_B9Z4C8 Transcriptional regulator, LysR family n=1 Tax=L... 285 2e-75 UniRef50_Q2RS80 Transcriptional regulator, LysR family n=3 Tax=A... 284 3e-75 UniRef50_A3Y562 Transcriptional regulator, LysR family protein n... 284 4e-75 UniRef50_A9M598 Transcriptional regulator, LysR family n=45 Tax=... 283 4e-75 UniRef50_A5V6Y9 Transcriptional regulator, LysR family n=1 Tax=S... 283 4e-75 UniRef50_A8HSF9 Transcriptional regulator n=8 Tax=Proteobacteria... 282 1e-74 UniRef50_B5WKQ0 Transcriptional regulator, LysR family n=5 Tax=P... 281 2e-74 UniRef50_C5SQF2 Transcriptional regulator, LysR family n=1 Tax=A... 281 3e-74 UniRef50_B2U8C9 Transcriptional regulator, LysR family n=27 Tax=... 280 3e-74 UniRef50_B8H3M0 Transcriptional regulator, LysR family n=12 Tax=... 280 4e-74 UniRef50_B5XS26 Transcriptional regulator, LysR family n=6 Tax=P... 280 5e-74 UniRef50_Q0KCL9 Transcriptional regulator, LysR-family n=2 Tax=C... 279 6e-74 UniRef50_Q0F1H8 Transcriptional regulatory protein n=1 Tax=Marip... 278 2e-73 UniRef50_C5CR23 Transcriptional regulator, LysR family n=1 Tax=V... 277 4e-73 UniRef50_A6UEA0 Transcriptional regulator, LysR family n=7 Tax=A... 276 5e-73 UniRef50_Q39AZ7 Transcriptional regulator, LysR family n=2 Tax=P... 276 9e-73 UniRef50_A6T0X1 Transcriptional regulator, LysR family, glycine ... 275 1e-72 UniRef50_D0IY54 Transcriptional regulator, LysR family n=1 Tax=C... 275 1e-72 UniRef50_A6VD26 Transcriptional Regulator, LysR family n=27 Tax=... 275 2e-72 UniRef50_A0K446 Transcriptional regulator, LysR family n=12 Tax=... 274 3e-72 UniRef50_Q0HTP8 Transcriptional regulator, LysR family n=19 Tax=... 274 3e-72 UniRef50_Q7MF54 Transcriptional regulator n=20 Tax=Proteobacteri... 272 1e-71 UniRef50_A8TRJ4 Transcriptional regulator, LysR family protein n... 271 2e-71 UniRef50_A3Y684 Transcriptional Regulator, LysR family protein n... 270 3e-71 UniRef50_Q1R0L5 Transcriptional regulator, LysR family n=1 Tax=C... 270 5e-71 UniRef50_Q2BQI7 Hypothetical D-serine deaminase activator n=1 Ta... 270 6e-71 UniRef50_A9IQK9 Transcriptional regulator, LysR-family n=6 Tax=B... 269 7e-71 UniRef50_A1UWF0 Transcriptional regulator, LysR family n=50 Tax=... 269 1e-70 UniRef50_A9CIB6 Transcriptional regulator, LysR family n=2 Tax=A... 268 2e-70 UniRef50_A9AEG5 LysR family glycine cleavage system transcriptio... 267 3e-70 UniRef50_B8IVZ6 Transcriptional regulator, LysR family n=1 Tax=M... 267 3e-70 UniRef50_C7CHT6 Transcriptional regulator, LysR family n=3 Tax=M... 267 3e-70 UniRef50_B1KBZ9 Transcriptional regulator, LysR family n=33 Tax=... 266 6e-70 UniRef50_Q5VM55 Putative LysR-type transcriptional regulator n=1... 266 7e-70 UniRef50_A8TTL8 Transcriptional Regulator, LysR family protein n... 265 9e-70 UniRef50_C9NUL4 D-serine dehydratase transcriptional activator n... 265 1e-69 UniRef50_Q39LC6 Transcriptional regulator, LysR family n=1 Tax=B... 265 1e-69 UniRef50_A8TZX1 Fumarate hydratase n=1 Tax=alpha proteobacterium... 265 2e-69 UniRef50_Q2RNY3 Transcriptional regulator, LysR family n=1 Tax=R... 264 2e-69 UniRef50_C6P3G3 Transcriptional regulator, LysR family n=1 Tax=S... 264 2e-69 UniRef50_B2IKM7 Transcriptional regulator, LysR family n=3 Tax=P... 264 2e-69 UniRef50_C6C726 Transcriptional regulator, LysR family n=17 Tax=... 264 2e-69 UniRef50_B2T5C1 Transcriptional regulator, LysR family n=50 Tax=... 264 2e-69 UniRef50_B9Z6G4 Transcriptional regulator, LysR family n=1 Tax=L... 264 3e-69 UniRef50_C5AEG0 Transcriptional regulator, LysR family protein n... 264 3e-69 UniRef50_Q391C1 Transcriptional regulator, LysR family n=5 Tax=B... 264 4e-69 UniRef50_Q125E9 Transcriptional regulator, LysR family n=1 Tax=P... 264 4e-69 UniRef50_A3SJ26 Transcriptional regulator, LysR family protein n... 263 6e-69 UniRef50_C3K1T6 Putative LysR-family transcriptional regulator n... 262 8e-69 UniRef50_B8INN0 Transcriptional regulator, LysR family n=4 Tax=P... 262 8e-69 UniRef50_A4F096 Transcriptional regulator, LysR family protein n... 262 8e-69 UniRef50_Q4ZLD0 Regulatory protein, LysR:LysR, substrate-binding... 262 9e-69 UniRef50_Q2W945 Transcriptional regulator n=2 Tax=Magnetospirill... 262 1e-68 UniRef50_B1G1M3 Transcriptional regulator, LysR family n=1 Tax=B... 261 2e-68 UniRef50_A5V722 Transcriptional regulator, LysR family n=22 Tax=... 261 2e-68 UniRef50_C4LCQ0 Transcriptional regulator, LysR family n=1 Tax=T... 261 2e-68 UniRef50_D0U593 DddR n=1 Tax=Pseudomonas sp. J465 RepID=D0U593_9... 261 2e-68 UniRef50_Q13Q04 Transcriptional regulator, LysR family n=1 Tax=B... 261 2e-68 UniRef50_C5AJX7 Transcriptional regulator, LysR family protein n... 260 3e-68 UniRef50_C7RIQ1 Transcriptional regulator, LysR family n=1 Tax=C... 260 3e-68 UniRef50_B1Y350 Transcriptional regulator, LysR family n=2 Tax=P... 260 4e-68 UniRef50_B8FDR1 Transcriptional regulator, ArgP, LysR family n=2... 259 8e-68 UniRef50_B2TAX0 Transcriptional regulator, LysR family n=1 Tax=B... 259 9e-68 UniRef50_A4Y0R1 Transcriptional regulator, LysR family n=2 Tax=P... 259 9e-68 UniRef50_P70773 Chromosome initiation inhibitor n=6 Tax=Gammapro... 259 1e-67 UniRef50_Q2S7E2 Transcriptional regulator n=1 Tax=Hahella chejue... 259 1e-67 UniRef50_D1RRX4 Transcriptional regulatory protein n=2 Tax=Enter... 259 1e-67 UniRef50_Q7MF37 Transcriptional regulator n=8 Tax=Vibrio RepID=Q... 259 1e-67 UniRef50_A8GEV9 Transcriptional regulator, LysR family n=22 Tax=... 258 2e-67 UniRef50_A6W2C5 Transcriptional regulator, LysR family n=3 Tax=G... 257 3e-67 UniRef50_A1AYS4 Transcriptional regulator, LysR family n=1 Tax=P... 257 3e-67 UniRef50_B5J5W4 LysR substrate binding domain protein n=2 Tax=Al... 257 4e-67 UniRef50_C1D4J6 IciA n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 257 5e-67 UniRef50_B9JNL4 Transcriptional regulator protein n=1 Tax=Agroba... 257 5e-67 UniRef50_B1J9I9 Transcriptional regulator, LysR family n=15 Tax=... 257 5e-67 UniRef50_B5WPF6 Transcriptional regulator, LysR family n=3 Tax=P... 256 8e-67 UniRef50_D0XI54 Putative uncharacterized protein n=1 Tax=Vibrio ... 255 1e-66 UniRef50_A3UHF6 Transcriptional regulatory protein n=2 Tax=Rhodo... 255 1e-66 UniRef50_Q7P212 Glycine cleavage activator protein n=1 Tax=Chrom... 254 2e-66 UniRef50_A6SUS7 Transcriptional regulator n=3 Tax=Proteobacteria... 254 2e-66 UniRef50_A3D4V0 Putative uncharacterized protein n=1 Tax=Shewane... 254 2e-66 UniRef50_Q1GH77 Transcriptional regulator, LysR family n=18 Tax=... 254 3e-66 UniRef50_Q15X65 Transcriptional regulator, LysR family n=1 Tax=P... 254 3e-66 UniRef50_A1B0V2 Transcriptional regulator, LysR family n=2 Tax=c... 254 3e-66 UniRef50_Q0HUM5 Transcriptional regulator, LysR family n=20 Tax=... 254 4e-66 UniRef50_B1JZS0 Transcriptional regulator, LysR family n=19 Tax=... 254 4e-66 UniRef50_Q7MHL5 Chromosome initiation inhibitor n=55 Tax=Vibrion... 253 4e-66 UniRef50_Q28K92 Transcriptional regulator, LysR family n=2 Tax=R... 253 4e-66 UniRef50_A4XNC3 Transcriptional regulator, LysR family n=23 Tax=... 253 4e-66 UniRef50_D0YXG6 D-serine dehydratase transcriptional activator n... 253 4e-66 UniRef50_A1K292 Probable transcriptional regulator, LysR family ... 252 9e-66 UniRef50_Q7NUX8 Inhibitor of chromosome initiation IciA n=2 Tax=... 252 1e-65 UniRef50_Q7VV30 Putative LysR-family transcriptional regulator n... 252 1e-65 UniRef50_B4X3U4 LysR substrate binding domain protein n=1 Tax=Al... 252 1e-65 UniRef50_C1DBD5 Transcriptional regulator, LysR family n=1 Tax=L... 252 2e-65 UniRef50_B9Z1E8 Transcriptional regulator, LysR family n=1 Tax=L... 251 2e-65 UniRef50_A1WKP4 Transcriptional regulator, LysR family n=1 Tax=V... 251 2e-65 UniRef50_A9ARM3 LysR family transcriptional regulator n=1 Tax=Bu... 251 2e-65 UniRef50_C9Y5B3 Putative uncharacterized protein n=1 Tax=Cronoba... 251 2e-65 UniRef50_B6IWX1 Glycine cleavage system transcriptional activato... 251 2e-65 UniRef50_C3KRQ9 Transcriptional regulator, LysR family n=1 Tax=R... 250 3e-65 UniRef50_Q145M0 Transcriptional regulator, LysR family n=15 Tax=... 250 4e-65 UniRef50_B4EPZ1 LysR family regulatory protein n=8 Tax=Proteobac... 250 4e-65 UniRef50_B0KIQ6 Transcriptional regulator, LysR family n=3 Tax=G... 250 4e-65 UniRef50_A9I5L1 Transcriptional regulator, LysR-family n=3 Tax=P... 250 5e-65 UniRef50_A6Y5L9 Transcriptional regulator n=2 Tax=Vibrio cholera... 250 5e-65 UniRef50_A5V2G2 Transcriptional regulator, LysR family n=1 Tax=S... 250 5e-65 UniRef50_A9AN03 LysR family transcriptional regulator n=5 Tax=Bu... 250 5e-65 UniRef50_B3RAJ7 Putative transcriptional regulator, LysR family ... 250 5e-65 UniRef50_Q2CH16 Probable transcription regulator protein n=1 Tax... 249 8e-65 UniRef50_Q2T9B3 Transcriptional regulator, LysR family n=54 Tax=... 249 9e-65 UniRef50_Q161D2 Transcriptional regulator, LysR family, putative... 249 9e-65 UniRef50_Q0KBJ5 Transcriptional regulator, LysR-family n=1 Tax=R... 249 9e-65 UniRef50_C4LDC5 Transcriptional regulator, LysR family n=1 Tax=T... 249 9e-65 UniRef50_P12529 HTH-type transcriptional activator ampR n=19 Tax... 249 9e-65 UniRef50_Q1GPJ4 Transcriptional regulator, LysR family n=1 Tax=S... 249 1e-64 UniRef50_A1TMH4 Transcriptional regulator, LysR family n=9 Tax=c... 249 1e-64 UniRef50_C4KCF0 Transcriptional regulator, ArgP, LysR family n=1... 249 1e-64 UniRef50_Q11AM5 Transcriptional regulator, LysR family n=1 Tax=C... 248 2e-64 UniRef50_Q1GXZ2 Transcriptional regulator, LysR family n=1 Tax=M... 248 2e-64 UniRef50_A3K624 Transcriptional regulator, LysR family protein n... 248 2e-64 UniRef50_A6VT77 Transcriptional regulator, LysR family n=2 Tax=M... 248 2e-64 UniRef50_B9JLT3 Transcriptional regulator protein n=2 Tax=Rhizob... 248 2e-64 UniRef50_P55576 Uncharacterized HTH-type transcriptional regulat... 247 3e-64 UniRef50_B6ITN2 Transcriptional regulator, LysR family protein n... 247 3e-64 UniRef50_A9BYV3 Transcriptional regulator, LysR family n=18 Tax=... 247 3e-64 UniRef50_A3VZZ4 Transcriptional regulator, LysR family protein n... 247 4e-64 UniRef50_C3K213 Putative LysR-family regulatory protein n=1 Tax=... 247 4e-64 UniRef50_A9BQB4 Transcriptional regulator, LysR family n=7 Tax=C... 247 4e-64 UniRef50_Q1GKW2 Transcriptional regulator, LysR family n=6 Tax=R... 247 4e-64 UniRef50_A6UI16 Transcriptional regulator, LysR family n=17 Tax=... 247 4e-64 UniRef50_B1ZJV5 Transcriptional regulator, LysR family n=1 Tax=M... 247 5e-64 UniRef50_B9Z657 Transcriptional regulator, LysR family n=1 Tax=L... 247 5e-64 UniRef50_B8IHI3 Transcriptional regulator, LysR family n=5 Tax=R... 246 7e-64 UniRef50_C3JN11 Transcriptional regulator, LysR family n=2 Tax=R... 246 8e-64 UniRef50_A8TK68 Glycine cleavage system transcriptional activato... 246 8e-64 UniRef50_A3D5N6 Transcriptional regulator, LysR family n=18 Tax=... 245 1e-63 UniRef50_A4BCT6 Glycine cleavage system transcription activator ... 245 1e-63 UniRef50_D1SS36 Transcriptional regulator, LysR family n=1 Tax=A... 245 1e-63 UniRef50_Q1GMA2 Transcriptional regulator, LysR family n=2 Tax=R... 245 1e-63 UniRef50_C6DHV2 Transcriptional regulator, ArgP, LysR family n=4... 245 1e-63 UniRef50_C7RLZ2 Transcriptional regulator, LysR family n=1 Tax=C... 245 1e-63 UniRef50_A9HZ50 Transcriptional regulator, LysR-family n=11 Tax=... 245 1e-63 UniRef50_Q0B1H3 Transcriptional regulator, LysR family n=7 Tax=B... 245 2e-63 UniRef50_Q2WAU7 Transcriptional regulator n=7 Tax=Proteobacteria... 244 2e-63 UniRef50_A4BIQ6 Transcriptional regulator, LysR family protein n... 244 3e-63 UniRef50_D0DDY1 HTH-type transcriptional activator AmpR n=1 Tax=... 244 3e-63 UniRef50_Q13NE9 Transcriptional regulator, LysR family n=5 Tax=B... 244 3e-63 UniRef50_D0J4E4 Transcriptional regulator, LysR family n=13 Tax=... 244 3e-63 UniRef50_A1VE23 Transcriptional regulator, LysR family n=3 Tax=D... 244 3e-63 UniRef50_A1WN40 Transcriptional regulator, LysR family n=1 Tax=V... 244 4e-63 UniRef50_Q0G2U4 Transcriptional regulator, LysR family protein n... 244 4e-63 UniRef50_C6BDS6 Transcriptional regulator, LysR family n=3 Tax=R... 244 4e-63 UniRef50_Q1GID9 Transcriptional regulator, LysR family n=5 Tax=R... 244 4e-63 UniRef50_C6B6V3 Transcriptional regulator, LysR family n=3 Tax=R... 243 5e-63 UniRef50_A0KD65 Transcriptional regulator, LysR family n=2 Tax=B... 243 5e-63 UniRef50_Q28S71 Transcriptional regulator, LysR family n=1 Tax=J... 243 7e-63 UniRef50_C9P538 Transcriptional regulator n=1 Tax=Vibrio metschn... 243 7e-63 UniRef50_Q5LWI7 Transcriptional regulator, LysR family n=1 Tax=R... 242 8e-63 UniRef50_B5WB35 Transcriptional regulator, LysR family n=2 Tax=B... 242 8e-63 UniRef50_B9JHJ0 Transcriptional regulator protein n=1 Tax=Agroba... 242 8e-63 UniRef50_B2TDK7 Transcriptional regulator, LysR family n=6 Tax=P... 242 8e-63 UniRef50_A9DBL2 Putative transcription regulator protein n=1 Tax... 242 1e-62 UniRef50_A1VJM2 Transcriptional regulator, LysR family n=16 Tax=... 242 1e-62 UniRef50_C6QF64 Transcriptional regulator, LysR family n=1 Tax=H... 242 1e-62 UniRef50_B9B8W0 Transcriptional regulator, LysR family n=3 Tax=B... 241 2e-62 UniRef50_B5ZZ47 Transcriptional regulator, LysR family n=4 Tax=R... 241 2e-62 UniRef50_A3SQ37 Probable transcription regulator protein n=1 Tax... 241 2e-62 UniRef50_C8QG37 Transcriptional regulator, LysR family n=1 Tax=P... 241 2e-62 UniRef50_Q0K5L3 Transcriptional regulator, LysR-family n=5 Tax=B... 241 3e-62 UniRef50_A3X5F2 Probable transcriptional regulator n=1 Tax=Roseo... 241 3e-62 UniRef50_P24734 HTH-type transcriptional activator ampR n=112 Ta... 241 3e-62 UniRef50_B0UR60 Transcriptional regulator, LysR family n=5 Tax=P... 240 3e-62 UniRef50_A0NTX9 LysR family transcriptional regulatory protein n... 240 4e-62 UniRef50_B9JYX8 Transcriptional regulator LysR family n=9 Tax=Al... 240 4e-62 UniRef50_Q0KB44 Transcriptional regulator, LysR-family n=2 Tax=C... 240 4e-62 UniRef50_C7LQL1 Transcriptional regulator, ArgP, LysR family n=1... 240 6e-62 UniRef50_Q2RWN3 Transcriptional regulator, LysR family n=20 Tax=... 239 7e-62 UniRef50_Q02J04 Probable transcriptional regulator n=7 Tax=Gamma... 239 8e-62 UniRef50_A1WA39 Transcriptional regulator, LysR family n=10 Tax=... 239 8e-62 UniRef50_Q7WNK1 LysR-family transcriptional regulator n=1 Tax=Bo... 239 8e-62 UniRef50_C6DEW9 Transcriptional regulator, LysR family n=4 Tax=P... 239 9e-62 UniRef50_B5XWH9 Transcriptional regulator, LysR family n=10 Tax=... 239 9e-62 UniRef50_UPI0001AF3FFF LysR family transcriptional regulator n=1... 239 1e-61 UniRef50_D0D8S3 Transcriptional regulator, LysR family n=1 Tax=C... 239 1e-61 UniRef50_C5AIJ9 Transcriptional regulator, LysR family protein n... 239 1e-61 UniRef50_C8SMW5 Transcriptional regulator, LysR family n=1 Tax=M... 238 2e-61 UniRef50_Q0K3U7 Transcriptional regulator, LysR-family n=1 Tax=R... 238 2e-61 UniRef50_D1P0T8 Transcriptional activator AmpR n=1 Tax=Providenc... 238 2e-61 UniRef50_B0T0F0 Transcriptional regulator, LysR family n=1 Tax=C... 238 2e-61 UniRef50_Q1LJ78 Transcriptional regulator, LysR family n=8 Tax=B... 238 2e-61 UniRef50_A7ID93 Transcriptional regulator, LysR family n=1 Tax=X... 237 3e-61 UniRef50_A8GAZ3 Transcriptional regulator, LysR family n=3 Tax=P... 237 3e-61 UniRef50_Q48M51 Transcriptional regulatory protein n=14 Tax=Pseu... 237 3e-61 UniRef50_A4XWR7 Transcriptional regulator, LysR family n=57 Tax=... 237 3e-61 UniRef50_B3Q4T7 Putative transcriptional regulator protein, LysR... 237 4e-61 UniRef50_C6DER6 Transcriptional regulator, LysR family n=12 Tax=... 237 4e-61 UniRef50_C6QHI5 Transcriptional regulator, LysR family n=1 Tax=H... 236 6e-61 UniRef50_A5W5M0 Transcriptional regulator, LysR family n=23 Tax=... 236 6e-61 UniRef50_C5CNQ6 Transcriptional regulator, LysR family n=1 Tax=V... 236 6e-61 UniRef50_A5WB87 Transcriptional regulator, LysR family n=23 Tax=... 236 6e-61 UniRef50_C8QAF0 Transcriptional regulator, LysR family n=1 Tax=P... 236 7e-61 UniRef50_D0L7H5 Transcriptional regulator, ArgP family n=1 Tax=G... 236 7e-61 UniRef50_A3K0M9 Chromosome replication initiation inhibitor prot... 236 8e-61 UniRef50_C6DIG5 Transcriptional regulator, LysR family n=1 Tax=P... 236 9e-61 UniRef50_A1KBM8 Glycine cleavage system transcriptional activato... 236 9e-61 UniRef50_A0B3W0 Transcriptional regulator, LysR family n=12 Tax=... 235 9e-61 UniRef50_B4SNX8 Transcriptional regulator, LysR family n=12 Tax=... 235 9e-61 UniRef50_B9JB94 Transcriptional regulator protein n=3 Tax=Proteo... 235 9e-61 UniRef50_B0KGK4 Transcriptional regulator, LysR family n=3 Tax=P... 235 1e-60 UniRef50_Q02H78 Chromosome initiation inhibitor n=28 Tax=Gammapr... 235 1e-60 Sequences not found previously or not previously below threshold: UniRef50_D1UM82 Transcriptional regulator, LysR family n=1 Tax=B... 262 1e-68 UniRef50_B6R905 Transcriptional regulator, LysR family n=1 Tax=P... 259 1e-67 UniRef50_A0KBW7 Transcriptional regulator, LysR family n=12 Tax=... 252 8e-66 UniRef50_Q5LSX4 Transcriptional regulator, LysR family n=4 Tax=A... 250 3e-65 UniRef50_A0KIP1 Transcriptional regulator, LysR family n=2 Tax=A... 245 2e-63 UniRef50_Q12AP5 Transcriptional regulator, LysR family n=1 Tax=P... 244 2e-63 UniRef50_B9TDJ5 Glycine cleavage system transcriptional activato... 244 2e-63 UniRef50_B5WEV2 Transcriptional regulator, LysR family n=1 Tax=B... 244 2e-63 UniRef50_D1RNP4 Transcriptional regulatory protein n=1 Tax=Serra... 244 3e-63 UniRef50_D0IB86 D-serine dehydratase transcriptional activator n... 244 3e-63 UniRef50_C2HVP7 Transcriptional regulator LysR family n=1 Tax=Vi... 243 5e-63 UniRef50_A8I6W2 Transcriptional regulator n=4 Tax=Proteobacteria... 242 1e-62 UniRef50_A1UV62 Transcriptional regulator, LysR family n=56 Tax=... 240 5e-62 UniRef50_A6U7H9 Transcriptional regulator, LysR family n=3 Tax=R... 238 2e-61 UniRef50_Q13LU0 Transcriptional regulator, LysR family n=1 Tax=B... 238 2e-61 UniRef50_Q2RS38 Transcriptional regulator, LysR family n=1 Tax=R... 238 2e-61 UniRef50_C8SGU4 Transcriptional regulator, LysR family n=1 Tax=M... 237 3e-61 UniRef50_Q88KW3 Transcriptional regulator, LysR family n=14 Tax=... 237 3e-61 UniRef50_D0B618 Transcriptional regulator n=56 Tax=Alphaproteoba... 237 4e-61 UniRef50_Q98NI2 Transcriptional activator; AmpR n=1 Tax=Mesorhiz... 237 5e-61 UniRef50_A0AX28 Transcriptional regulator, LysR family n=6 Tax=B... 236 7e-61 UniRef50_D1UCW9 Transcriptional regulator, LysR family n=1 Tax=B... 236 7e-61 >UniRef50_B3R274 Transcriptional regulator of glycine cleavage system operon, LysR family n=1 Tax=Cupriavidus taiwanensis RepID=B3R274_CUPTR Length = 308 Score = 318 bits (817), Expect = 1e-85, Method: Composition-based stats. Identities = 59/306 (19%), Positives = 108/306 (35%), Gaps = 14/306 (4%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-P 57 M R P L+A + R F RAA++L +T SAVS +IK LE G L +R Sbjct: 1 MSRQIPPLNPLRAFEVAARHLSFTRAAEELFVTPSAVSHQIKALEESLGVQLFIRDAKAL 60 Query: 58 RPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 T G L ++ + + L + + WL+P + + Sbjct: 61 VLTPAGTAYLPSVQLAFKQLADATHRLHSKD-RPALKVNMPPTFAVKWLIPRMDRFMKAH 119 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 P ++L+V + R + A+ P + A++ + V S ++ Sbjct: 120 P-DIDLKVSTSNHRID-FERDDFDMAIRYGRGDYPGLHCELCMAVEVIPVCSPAL--RHG 175 Query: 178 PNGV-TRSALLKAPVVAFDH-----LDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLA 231 P + T S L ++ D + +L+ + S + A Sbjct: 176 PQPLETPSDLKHHTLLHDDSTYTDVSNPDWAMWLEHAGVTDVDASRGPSFWPSHLVINAA 235 Query: 232 RQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGH 291 G ++ IE++LA G L+ L + + P+ R+ + + D+ Sbjct: 236 LNGLGVALVKKNWIEQDLAEGRLVRLFESIRLPVEFSYFVVFPKERLEDRRIRSFTDWIR 295 Query: 292 KVLRQD 297 + D Sbjct: 296 AEVSAD 301 >UniRef50_A8TN53 Transcriptional regulator, LysR family protein n=2 Tax=Proteobacteria RepID=A8TN53_9PROT Length = 312 Score = 317 bits (814), Expect = 3e-85, Method: Composition-based stats. Identities = 61/298 (20%), Positives = 109/298 (36%), Gaps = 8/298 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPT 60 + P +L+A +A R F +AA +L +TQ+A+S +IK LE G L R T Sbjct: 3 RLPPLNSLRAFEAAARHLSFTKAAGELHVTQAAISHQIKSLEEWLGMVLFKRQNRALLLT 62 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 + GQ L LR+ + + L+++ A WL+P L + P Sbjct: 63 DAGQAYLPPLREAFDRIHDATAKLRERDKSGALTVSTFTSFAAKWLVPKLGRFASGHP-D 121 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + +++ + V + ++L V S + P Sbjct: 122 IEVRLAINDVLVD-FGSDAVDVGIRYGRGDWRGLRTERLMTEVVFVVCSPRLLD--GPAP 178 Query: 181 VT-RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 +T L ++ D L + +L+ P + N SE +Q A G + Sbjct: 179 LTCPEELRYHTMLHDD-LPEDWDTWLEAAGAGPIKARRDLAFNHSEMVLQAAIDGLGVAL 237 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 + + +LA+G L+ + Y+ + PE R A D+ + +D Sbjct: 238 GRSVLVADDLAAGRLVKPFDLELPTQAAYYLVY-PEGTQERPKVKAFRDWVTSEVARD 294 >UniRef50_D0J1E9 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J1E9_COMTE Length = 321 Score = 307 bits (789), Expect = 2e-82, Method: Composition-based stats. Identities = 58/302 (19%), Positives = 112/302 (37%), Gaps = 9/302 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPT 60 K P L+A + R F +AA++L +T SAVS ++K LE G L VR + T Sbjct: 20 KIPPLNPLRAFEVSARHMSFTKAAEELFVTPSAVSHQVKSLEENLGIALFVRDSKTLTLT 79 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G+ L +++ E + LL + + WL+P L+ ++ + Sbjct: 80 PAGKAYLPGVQEAFRQLEVATYQLHREKSTALLKINLPPTFAVKWLIPRLSRFASEH-LD 138 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L+L+V + R +V + + + ++ V S + P Sbjct: 139 LDLKVSTS-KLMADFSRDDVDMEIRYGRGVYAGLYSEMVLPVEVFAVCSPALQQGPHP-I 196 Query: 181 VTRSALLKAPVVAFDH-----LDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGT 235 + L ++ D + +L + S + A G Sbjct: 197 RDFADLRSHVLLHDDSTYDDVSNPNWATWLAHMGVHDINATRGPSFWPSHLVIDAAIDGQ 256 Query: 236 TCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 ++ ++++LASG+L+ L P ++ P+SR+ + +D+ L Sbjct: 257 GVALVKKSWVQQDLASGKLVRLFPEYSLPIEFAYYLVFPQSRLGDPRITSFVDWMRAELA 316 Query: 296 QD 297 +D Sbjct: 317 RD 318 >UniRef50_A7FFF5 Glycine cleavage system transcriptional activator n=45 Tax=Proteobacteria RepID=A7FFF5_YERP3 Length = 305 Score = 307 bits (787), Expect = 4e-82, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 116/297 (39%), Gaps = 6/297 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPT 60 + P L+A DA R F +AA++L +TQ+AVS +IK LE+ G L R T Sbjct: 4 RLPPLNALRAFDAAARHLSFTKAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSLLLT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 E+GQ ++++ E Q S L++++ WL+P L+ A P Sbjct: 64 EEGQSYYLDIKEIFTSINEATRKLQARSAKGALTVSLPPSFAIQWLVPRLSGFNAAYP-G 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 ++++++ R +++L +V A+ ++L A L V + Sbjct: 123 IDVRIQAVDREEDKLAD-DVDVAIFYGRGNWSGLRTERLYAEFLLPVCAPSLLTGENGLK 181 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 V S L ++ D A+ +Q I + S VQ A G ++ Sbjct: 182 V-PSDLANHTLLHDTSRRD-WLAYTRQLGVPQINVQQGPIFSHSAMVVQAAVHGQGIALV 239 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 ++ + E+ +G L+ + + ++ +S+ A + + Sbjct: 240 NNVMAQSEIEAGRLVCPFNDVLVSKNAFY-LVCHDSQAELGKIAAFRQWILARAASE 295 >UniRef50_P0A9F8 Glycine cleavage system transcriptional activator n=206 Tax=Gammaproteobacteria RepID=GCVA_ECO57 Length = 305 Score = 306 bits (784), Expect = 8e-82, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 116/297 (39%), Gaps = 6/297 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPT 60 + P L+ DA R F RAA++L +TQ+AVS +IK LE+ G L R T Sbjct: 4 RLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSLLLT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 E+GQ ++++ E Q S L++++ WL+P L+ + P Sbjct: 64 EEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLLPSFAIHWLVPRLSSFNSAYP-G 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 ++++++ R +++L +V A+ P V+KL A L V S P Sbjct: 123 IDVRIQAVDRQEDKLAD-DVDVAIFYGRGNWPGLRVEKLYAEYLLPVCSPLLLTGEKP-L 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 T L K ++ D + +Q I + S +Q A G + Sbjct: 181 KTPEDLAKHTLLHDASRRDWQT-YTRQLGLNHINVQQGPIFSHSAMVLQAAIHGQGVALA 239 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 ++ + E+ +G L+ + + ++ +S+ A + + Sbjct: 240 NNVMAQSEIEAGRLVCPFNDVLVSKNAFY-LVCHDSQAELGKIAAFRQWILAKAAAE 295 >UniRef50_A6VVZ6 Transcriptional regulator, LysR family n=3 Tax=Gammaproteobacteria RepID=A6VVZ6_MARMS Length = 311 Score = 301 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 106/294 (36%), Gaps = 5/294 (1%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 + P +L+ ++ R F +AA++L +T SA+S +IK LE+ G L RT T Sbjct: 16 RLPPLNSLKCFESAARHGSFNKAAKELSVTPSAISHQIKGLESFLGLELFRRTKRKVILT 75 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 E G+ L ++ + E + ++ L LAV L WL+P + P Sbjct: 76 EAGESYLKPIKSIFEQLESATSELKSKQKSGSLRLAVAPAFLTRWLMPRMERFQERYP-D 134 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + +++ T + ++ AV L V + + P Sbjct: 135 IQIEISSSTGLID-FSANDIDMAVYFGSGDWDDVEAYYLRPARLAPVCNPRLIKPEQP-I 192 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 V + P++ D +LQQ+ P + +S A QG + Sbjct: 193 VKPEDMRFYPLLHVTKRKDEWHDWLQQHDLDPKLFRRGLMFSSGSLTAGAAAQGLGISLT 252 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 I E+ +G L L ++ + + R + A ++ + + Sbjct: 253 DPELIMPEIEAGTLKVLFDQHLITNRSFYLVYE-KRRSVTSAMSAFKEWIIEEM 305 >UniRef50_Q2CJD7 Putative uncharacterized protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CJD7_9RHOB Length = 294 Score = 299 bits (767), Expect = 7e-80, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 99/290 (34%), Gaps = 6/290 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTE 61 P L+ +AV R F AA +L +TQSAVS+ IK LE L R R TE Sbjct: 5 LPSLNALRTFEAVSRHGSFTNAADELNVTQSAVSRMIKGLEEHLELQLFERAGRQIRLTE 64 Query: 62 QGQKLLALLRQVELLEEEWLGDE-QTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G + + + E + T + LS+ + WLLP L + P Sbjct: 65 DGVYYSEKISKAMDILEVASRELIDTKAGRGTLSIGMLPTFGTKWLLPRLGSFMQLHP-E 123 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L + V + + A+ + P + L + + V S + +P Sbjct: 124 LTVDVTSSDGELD-FADERIDVAIRFGYGNWPGARAEPLMSEELQVVCSPRIMDGPYP-L 181 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + L + ++A +LQ G + +Q A+ G ++ Sbjct: 182 TDYAQLRRHSLIAHSSRPGTWSHWLQAVGASTEGYDKGLRLEHFYMVLQAAKSGLGIGLL 241 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG 290 P ++A+G L P Y+ P + A ++ Sbjct: 242 PSYLAADDIANGSLTAPFPVRVVSPGGYY-LVTPWDKTDLPRVQAFREWV 290 >UniRef50_Q210B4 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=Q210B4_RHOPB Length = 314 Score = 297 bits (763), Expect = 2e-79, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 104/296 (35%), Gaps = 7/296 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPT 60 + P L+A +A R F AA +L +TQ+A+S +I++LE G L VR T Sbjct: 4 RLPSLNGLRAFEAAARHLSFTSAAAELNVTQTAISHQIRRLEEELGIQLFVRQNRTLALT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 Q + L +R +L+++ A A WLLP L+ P Sbjct: 64 PQARDYLPGVRAAFNDLRLATDRLLRKDAACVLTISTLASLAAKWLLPRLSAFQEAHPA- 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 +++++ T + R+G+V A+ P D L A V S + P Sbjct: 123 IDVRITTSTALVD-FRKGDVDAAIRYGRGQWPGLRADWLMADQLFPVCSPALLQGKKP-L 180 Query: 181 VTRSALLKAPVVAFDHL--DDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 + L + ++ DD P + VQ A G Sbjct: 181 RSPQDLAEHSLLYSSGGYDDDWRLWLTAAGLPADISKQPGLSFDLIFMTVQAAIDGLGVA 240 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 + +E ++A G L+ ++ +PE+R A + + Sbjct: 241 IGRTSYVEADIAKGRLVVPFQIKLPDEWGFY-LVSPEARAETPKLSAFRQWLLASI 295 >UniRef50_A7HSK5 Transcriptional regulator, LysR family n=2 Tax=Bacteria RepID=A7HSK5_PARL1 Length = 317 Score = 292 bits (749), Expect = 9e-78, Method: Composition-based stats. Identities = 62/293 (21%), Positives = 108/293 (36%), Gaps = 6/293 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 + P + L+A +A R F RAA +L +T +AVS +I+ LE G L RT T Sbjct: 5 RLPSLKALRAFEAAARHGSFSRAAAELSVTHAAVSHQIRALEEELGAGLFHRTGRAVELT 64 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 E+G++L +L E T L+++V A WL+ L +P Sbjct: 65 ERGERLYPVLAAAFDQIAEGWSQAGAKDTA-ALTVSVEPSFAARWLVLRLGKFNRANP-E 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + L++ + + R +V V P + +KL V S + P Sbjct: 123 IELRLLPSSELVD-FSREDVDIGVRYGLGGWPDVVSEKLFEATVYPVCSPALLDPKKP-I 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 L P++ + ++ Q P ++ + + +Q A G + Sbjct: 181 RKPEDLKSYPLLHEETMEHWQQWLEAAGVKHPRWALRGPLFIEASLALQAAAGGQGVALA 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 +LA G LI L YW + P+ + + A ++ + Sbjct: 241 NDTLAMADLAEGRLIRLFDIEMPDEEGYWLVY-PKDGLKKPKVQAFRNWIREE 292 >UniRef50_A6WYX4 Transcriptional regulator, LysR family n=38 Tax=Rhizobiales RepID=A6WYX4_OCHA4 Length = 310 Score = 291 bits (745), Expect = 3e-77, Method: Composition-based stats. Identities = 64/302 (21%), Positives = 112/302 (37%), Gaps = 12/302 (3%) Query: 1 MKR-----PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-T 54 MK PD TLQA + R F +AA +L +TQSAVS++IK LE+ G L R Sbjct: 1 MKLSRRLIPDIATLQAFECAARHGSFTQAAHELNLTQSAVSRQIKDLESQLGVLLFERIR 60 Query: 55 VPPRPTEQGQKLLALLRQVELLEEEW-LGDEQTGSTPLLLSLAVNADSLATWLLPALAPV 113 ++ G+K L +R++ E+ L + + S+A WL+P ++ Sbjct: 61 QRILLSDAGRKFLPEVRRLLNQTEDTMLRAMASAQSTSSFSVATLPTFGTRWLMPRISDF 120 Query: 114 LADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFA 173 + P + + V + + A+ L + + V+S Sbjct: 121 IEKHP-GIAINVASRSGVFD-FEEQPFDLAIHYGQPVWAHATCTFLCSEVIVPVASPALL 178 Query: 174 EKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQ 233 + P L P++ M + + + H + + A Sbjct: 179 KARHP--SAPEELENEPLLHLATRPKMWAQWFESCGVEGRSAYRGHRFDQFSMVIGAALA 236 Query: 234 GTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 G ++P IE+EL SGEL+ L + Y+ PE ++ +T + Sbjct: 237 GLGFALLPLYLIEQELLSGELVMLFEKPMRTENEYYLVV-PEGKLENPLTQVFCQWIAGQ 295 Query: 294 LR 295 + Sbjct: 296 VG 297 >UniRef50_A7FF10 Chromosome initiation inhibitor n=169 Tax=Gammaproteobacteria RepID=ICIA_YERP3 Length = 302 Score = 290 bits (744), Expect = 3e-77, Method: Composition-based stats. Identities = 273/297 (91%), Positives = 281/297 (94%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLEN+FGQPLLVRTVPPRPT Sbjct: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENLFGQPLLVRTVPPRPT 60 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 EQGQKLLALL QVELLEEEWLG++ TPLLLSLAVNADSLATWLLPAL PVLAD PIR Sbjct: 61 EQGQKLLALLHQVELLEEEWLGNDNGVDTPLLLSLAVNADSLATWLLPALKPVLADLPIR 120 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 LNLQVEDETRTQERLRRGEVVGAVSIQ Q LPSCLVD+LGALDYLFV+SK FAE+YFPNG Sbjct: 121 LNLQVEDETRTQERLRRGEVVGAVSIQPQPLPSCLVDQLGALDYLFVASKAFAERYFPNG 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 VTRSALLKAP VAFDHLDDMHQAFLQQNFDL PGSVPCHIVNSSEAFVQLARQGTTCCMI Sbjct: 181 VTRSALLKAPAVAFDHLDDMHQAFLQQNFDLSPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 PHLQIEKELASGELIDLTPGL QRRML+WHRFAPESR MRKVTDALL YG +VLRQD Sbjct: 241 PHLQIEKELASGELIDLTPGLLQRRMLFWHRFAPESRTMRKVTDALLSYGRQVLRQD 297 >UniRef50_Q5DYL0 Transcriptional regulator, LysR family n=2 Tax=Vibrio fischeri RepID=Q5DYL0_VIBF1 Length = 299 Score = 288 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 54/304 (17%), Positives = 110/304 (36%), Gaps = 14/304 (4%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV----P 56 MK L+A +A R F AA++L +T +A+ Q++K LE G L R Sbjct: 1 MKLHHLNGLRAFEASARHLSFSLAAKELNVTPAAIGQQVKLLEEWLGISLFERRTSGVSR 60 Query: 57 PRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLAD 116 T++ L + + + L + +L++AV+ A WLL + Sbjct: 61 LVLTKEALLGLPEITRGFEHLAQGLDLLKPMKNSPILTVAVSPAFAAKWLLMRIDDFQTS 120 Query: 117 SPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY 176 +L+++ RT + L G + + L V S K Sbjct: 121 Y-SEWDLRLDTNIRTVDYLTEG-IDVGIRYGKGQWEGLEASLLMTESVFPVCSPELLNK- 177 Query: 177 FPNGVTRSALLKAPVVAF-----DHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLA 231 ++ + P++ + + + +QN + +N+S + +Q A Sbjct: 178 --GIEGIESIAQFPLLHDISLPKESGFPSWKVWFEQNSIFDVNTEKGLKINNSASVIQAA 235 Query: 232 RQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGH 291 G + + ++ +L G L+ L P L L ++ + ++ ++ H Sbjct: 236 INGQGIALGRSVLVKDDLDCGRLVQLFPDLESTTELAYYVVWKQKGIVSDKISVFKEWLH 295 Query: 292 KVLR 295 + + Sbjct: 296 QQVE 299 >UniRef50_A4JTI2 Transcriptional regulator, LysR family n=15 Tax=Proteobacteria RepID=A4JTI2_BURVG Length = 318 Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 59/299 (19%), Positives = 114/299 (38%), Gaps = 12/299 (4%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV----PPRPTE 61 L+A +A R + F AA +L +T +AV Q ++ LE G PL R+ PTE Sbjct: 7 LNALRAFEASARHQSFSAAAVELHVTPAAVGQLVRTLEEWLGAPLFHRSASGRVRLVPTE 66 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 ++ L +R + GS +L++AV+ A WLLP + P Sbjct: 67 AAERALPDIRAGFDRLAIGFERLKEGSINGVLTVAVSPAFAAKWLLPRIERFQTAWP-DT 125 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +++++ + + + +G + V P KL + V + + P Sbjct: 126 DVRLDTNLKPVDFVAQG-IDIGVRYGTGNWPGLASQKLMDEEVYPVCTPK-LRREHPGLR 183 Query: 182 TRSALLKAPVVAFDHLD-----DMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 + L + ++ +D +L++ + +N+S A +Q A +G Sbjct: 184 NPADLRRVTLIHDLSMDSHTGFPTWDTWLRKVGFTDVSTKRGLKINNSAAVLQAAIEGHG 243 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 + + +LA+G L+ L P + L ++ + A D+ + Sbjct: 244 VALARSVMAHDDLAAGRLVRLFPDVAFTSPLAYYVVVRDECACLPKLTAFRDWLLEEAA 302 >UniRef50_B7RUK1 LysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RUK1_9GAMM Length = 296 Score = 286 bits (734), Expect = 5e-76, Method: Composition-based stats. Identities = 64/290 (22%), Positives = 118/290 (40%), Gaps = 6/290 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPT 60 P +L+A + R F A+ +L +T +AVS ++K LEN G L +R R T Sbjct: 4 SLPPLNSLRAYECAARHMSFSLASAELNVTPAAVSHQVKLLENHLGVSLFIRLTRKLRLT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G++LL + + L E + S +L+L + A WL P L P Sbjct: 64 TAGERLLPEVSEAFLKLREAVNTVDPNSANDVLTLRLGPSLAARWLSPRLHLFWQQFP-T 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 ++L++ R ++ A++ + P + L +D+ V S Sbjct: 123 IDLRLYHSNSPVN-FDREDIDLAITYGAGSWPGVIASPLLDIDFYPVCSPKLVGTE-SAS 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 T + LL ++ H DD +A+L+Q+ I++ + +Q A G + Sbjct: 181 STPALLLNHTLLHDAHYDD-WEAWLKQSDMPQINPRRGIIIDDTNVLIQAALDGQGIALC 239 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG 290 L +++ L +G L+ L + M Y+ P+ + R + ++ Sbjct: 240 STLFVQEHLDAGRLVRLFDTKLKNDMAYY-IVCPKGHLQRPAVKEVKNWL 288 >UniRef50_B9JKI0 Transcriptional regulator protein (Activator) n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JKI0_AGRRK Length = 334 Score = 286 bits (732), Expect = 9e-76, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 104/293 (35%), Gaps = 6/293 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPPRPT 60 + P + +A R F AA +LC+TQSAVSQ+I+Q+E++ L R T Sbjct: 42 RLPPLNLFRVFEAAARHGSFTAAADELCVTQSAVSQQIRQIEDLLDVRLFRRLPRRVELT 101 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 +G +L + + + L P +L + + WL+P L + +P + Sbjct: 102 REGTQLASAVHESLALLARACERIVDPMAPTVLCINAPPAIASRWLVPRLKRFMQLNP-Q 160 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + + + T R ++ A+ V++LG V S + P Sbjct: 161 IKVTLLASNDTVN-FDRQDIDVAIRWGRGDWQGARVERLGPDKLFPVCSPSVL-REGPPI 218 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 V+ L ++ + + + N + + A QG + Sbjct: 219 VSPGDLAHHTLLQ-NMNSSLWATWFATAGVGSVNFDETLYFNDAGLLLDAAVQGQGIALA 277 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 H+ +E +L +G LI Q Y +P+ V + + Sbjct: 278 NHMLVENDLKTGRLIRPFNIEIQSGESYHILTSPDFSEKAAVAE-FRQWIRAE 329 >UniRef50_C5D189 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=C5D189_VARPS Length = 299 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 104/295 (35%), Gaps = 6/295 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPT 60 K P L DA R F +AA++L +T A+S+ +K LE L R R T Sbjct: 7 KLPPLTALPCFDAAARHLSFTKAAEELHLTPGAISRAVKHLEQQLDVQLFERGTRSVRLT 66 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 E G+ +R V + L+++ + WL+P L Sbjct: 67 EVGEPYAKAVRDVLDQLAAATAAATARLSGSTLNVSTSDGFAGRWLVPRLYRFRQAH-GD 125 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 ++++V R G + A+ P + L + V S + Sbjct: 126 IDVRVSTTGRLASFHGDG-IDVAIRYGAGNYPGLTAEWLADEEVFPVCSPRLLKGPHALR 184 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + L ++ D +L++ + +S VQ A QG + Sbjct: 185 K-PADLRHHTLIR-DGYPIAWADWLERAGVKGVNARSGLAFDSYTFAVQAAVQGEGVVLG 242 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 + + +LA+G L+ + ++ + PE+ M ++ A ++ + +R Sbjct: 243 RTMLVADDLAAGRLVRPFKQALKAFSSFYLVYPPEA-MRQRKVKAFKEWLLEEMR 296 >UniRef50_P45099 Glycine cleavage system transcriptional activator homolog n=32 Tax=Pasteurellaceae RepID=GCVA_HAEIN Length = 301 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 114/297 (38%), Gaps = 7/297 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 + P +L++ ++ R F +AA +LC+TQ+AVS +IK LE G L R T Sbjct: 8 RLPPLNSLKSFESAARYLSFTKAADELCVTQAAVSHQIKLLEXFLGIDLFKRKNRSLELT 67 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 E G+ + ++ E T T L+++V WL+P L+ P + Sbjct: 68 ELGKAYFVDINKILRRLNEATERLLTLKTDPHLNISVPQTFGIQWLVPHLSEFNQLYP-Q 126 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + +++ + + L + E+ A+ + VD+L + L ++S + Sbjct: 127 IEVRLTGVDQDEGLLNK-EIDLAIYYGLGNWQNLQVDRLCEENLLILASPELLAEN--PI 183 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + L K ++ H D QA + + + +Q A G + Sbjct: 184 IQPEDLKKHTLIHI-HTCDNWQAMANHLQLDDLNIQQGPLFSHTFMALQAAIHGQGIVLA 242 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 L +E+ +G L + P ++ R+ + A + ++Q+ Sbjct: 243 NRLLALQEIENGSLQAVLPTNLPDPKSFY-VVNHLDRLDDQKIQAFRQWIINSIKQE 298 >UniRef50_B9Z4C8 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z4C8_9NEIS Length = 318 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 63/306 (20%), Positives = 115/306 (37%), Gaps = 13/306 (4%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPP 57 M+R P LQ +A +R F RAA++L +TQSAVS++I+ LE+ G+PL R Sbjct: 1 MRRTLPSLMALQCFEAAVRHLSFTRAAEELNLTQSAVSRQIRALEDFIGRPLFERVKQRL 60 Query: 58 RPTEQGQKLLALLRQVELLEEEWLGDEQT-GSTPLLLSLAVNADSLATWLLPALAPVLAD 116 T G+ A ++ V E +L++A+ + WL+P L A Sbjct: 61 VLTVAGEAYAAAVQDVLDRAEAATLQLMAYSGEGGMLTIAMLPTFGSRWLVPRLGDFAAR 120 Query: 117 SPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY 176 P + L + + R + + E A+ P + +L D + V + Sbjct: 121 YP-DIQLNLVTQVRPFD-FDKVEADVAIHFGPALWPGAICHRLMGEDIVPVCAPALLGGR 178 Query: 177 FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNF-----DLPPGSVPCHIVNSSEAFVQLA 231 P+ +L ++ +L G + +Q A Sbjct: 179 -PHLDDVREILAYTLLQHTTRPQAWNDWLHAAGIEGLTGNEAGLLSGPRFEHFFMVIQAA 237 Query: 232 RQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGH 291 G ++PH +E+EL SG L+ + + Y+ P ++ ++ Sbjct: 238 VAGLGIAVLPHFLVEEELQSGRLVLALDKPVRSQHAYY-LVHPATKADLYKVRVFREWLL 296 Query: 292 KVLRQD 297 + ++ Sbjct: 297 EQAGRE 302 >UniRef50_Q2RS80 Transcriptional regulator, LysR family n=3 Tax=Alphaproteobacteria RepID=Q2RS80_RHORT Length = 317 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 58/298 (19%), Positives = 100/298 (33%), Gaps = 10/298 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 + P L+A +A R GF AA++L +T +AVS ++K LE+ G L R T Sbjct: 4 RLPPLNALRAFEAAARHGGFTGAARELHVTPAAVSHQVKGLEDALGVSLFHRLAKGLELT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G+ L L + G+ L+++V A WL P LA L P Sbjct: 64 AAGRAYLPELTAGFDQLARASERLKRGALVGRLTVSVLPSFAAGWLAPRLASFLRRYP-D 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + L + RT + +R V + P ++ + + + P Sbjct: 123 ILLDLRSTPRTVDFIRE-RVDLGIRYGGGIYPGLASYRILEEEVFPICAPALLNGPVP-L 180 Query: 181 VTRSALLKAPVVAFD---HLDDM--HQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGT 235 + L ++ + + +L + H S A + G Sbjct: 181 RGFADLRHHVLLHDPGILPGEPWTGWEPWLAEAGVTDIDLEAGHGFTESIAMIHACVAGL 240 Query: 236 TCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 + + + L SG L+ P YW P S+ A + + + Sbjct: 241 GVGIGRSGLVTELLRSGRLVRPFPVSRPADFSYWVVVPPPSQTN-PKAAAFIGWLLET 297 >UniRef50_A3Y562 Transcriptional regulator, LysR family protein n=2 Tax=Proteobacteria RepID=A3Y562_9GAMM Length = 296 Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats. Identities = 66/299 (22%), Positives = 116/299 (38%), Gaps = 13/299 (4%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPT 60 + P + +QA +A R + ++AA +LC+T A+SQ+IK LE L R R T Sbjct: 3 RLPPLKAMQAFEAAGRHQSLKKAADELCVTTGAISQQIKLLEAHLEVELFKRLNKSVRLT 62 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 E G+ L L+ Q L + QT S L++++V A WLLP L P Sbjct: 63 EAGRACLPLIEQGFELLGDAAAKAQTYSEQKLITISVAPSFGAKWLLPRLEQFRRKHP-D 121 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 ++L+++ TR + +V ++ V+ L + V S Sbjct: 122 IDLRIDASTRLID-FAHDDVDISIRYGAIKEKGMHVEALSHEELFPVCSPHLM----TQC 176 Query: 181 VTRSALLKAPVVAFDHLD-----DMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGT 235 + AL P++ + ++++N + S +Q A G Sbjct: 177 ASLEALSDYPLLHLERRSADKSFPGWAEWIEENGLNKEAFKHGPRFSMSSMVLQAAIDGQ 236 Query: 236 TCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 M + +L +G LI L P R ++H ++ R +D+ + + Sbjct: 237 GVAMASSVLAADDLKTGRLIRLFPQ-SLRAKYHYHLICTKNLSQRADVVKFIDWIKQEI 294 >UniRef50_A9M598 Transcriptional regulator, LysR family n=45 Tax=Rhizobiales RepID=A9M598_BRUC2 Length = 310 Score = 283 bits (726), Expect = 4e-75, Method: Composition-based stats. Identities = 63/296 (21%), Positives = 101/296 (34%), Gaps = 7/296 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTE 61 P L A DAV R F AA +L +TQ AVS+++ LE G L RT +E Sbjct: 9 LPSTSALAAFDAVARHESFSAAADELSLTQGAVSRQVASLEEQLGAALFDRTSRNVVLSE 68 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G+ L + + L+LA WL+P + +A P + Sbjct: 69 AGRVYLQAIGPALASIRAASLQVMSQMRGTTLNLAFLPTFGTRWLIPRIPRFVAQYP-HI 127 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 L + R G + A+ I P+ L V S F + + Sbjct: 128 ILNFATRIGQFDFDREG-LDAAIHIGQPDWPNAECTFLMDETVAPVCSPAFLKDH--PVT 184 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 + LL+ P+ + + + P Q G ++P Sbjct: 185 SPHDLLRLPLFNMASRPGAWEHWFRSLGITTP-VPGGMRFEQFSNVSQACVAGLGMGLMP 243 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 I E+ +G+LI P + Y+ AP++R A D+ +R + Sbjct: 244 LFLIRSEIENGQLIVACPHTVKSPSSYYF-VAPKTRAKTPAVTAFRDWLLAEVRNE 298 >UniRef50_A5V6Y9 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V6Y9_SPHWW Length = 305 Score = 283 bits (726), Expect = 4e-75, Method: Composition-based stats. Identities = 66/299 (22%), Positives = 117/299 (39%), Gaps = 7/299 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPT 60 K P L+ + V R F RAA +LC+TQ+AVS +IK LE G PL R + T Sbjct: 4 KLPPLLGLRVFECVARHLSFTRAADELCVTQAAVSHQIKALEEWMGGPLFQRLSRTIKLT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 E G+ L+A + Q + + G + L++ V + W++P LA P Sbjct: 64 ELGESLVAPIGQALDIMADATGRALDRDQNVPLTVGVFDSFSSAWIIPRLARFRERFPA- 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 ++++ + + + L G+ + + + P+ V++L L V S E++ G Sbjct: 123 VDVRFIAKRQEDDALSSGDADIEIRFGNGSWPNFQVERLLTESVLPVCSPALIERHGAPG 182 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + + + P++ D FLQ + S Q G + Sbjct: 183 -SLADAPRFPLLH-DVFSIDWSEFLQYFGVRGANVHRGFGFSHSHLVKQACIDGQGIALG 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFA---PESRMMRKVTDALLDYGHKVLRQ 296 + ++L SG L+ P + Y+ + ++ LLD + Q Sbjct: 241 RWPLVAEDLESGALVRPFPEVLALDSAYYIVCRKAVSDEANIKAFAYWLLDEAELFVSQ 299 >UniRef50_A8HSF9 Transcriptional regulator n=8 Tax=Proteobacteria RepID=A8HSF9_AZOC5 Length = 357 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 101/290 (34%), Gaps = 7/290 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTE 61 P TL A +A R + F RAA +L +TQ AVS++I+ LE G L R T+ Sbjct: 60 LPSISTLTAFEAAARHQSFSRAAAELHLTQGAVSRQIRHLEEQIGLDLFERVRQRVVLTD 119 Query: 62 QGQKLLALLRQVELLEEEWLGDEQT-GSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G+ LA +R + + T + LAV WL+P L LA P Sbjct: 120 GGRLYLAEIRPLLQALSDATQRAMTYAGGAGSIQLAVLPTFATRWLMPRLPDFLARFP-D 178 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + + + + A+ P + + L + + V S F +++ + Sbjct: 179 ITINFISRIAPFD-FAAEPLDAAIHYGDPVWPGAICEHLMDEEVVPVCSPAFRDRHALD- 236 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 L ++ + +L P + A G ++ Sbjct: 237 -RPERLAGVVLLQQTTRPHLWDEWLALAGASHPSPFRGPRFEQFTMIAEAAAAGLGVGLV 295 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG 290 P +E+E+A G L+ Y+ PE++ A + Sbjct: 296 PRFFVEEEVAQGRLVLPFDRPMCSDKAYY-VVYPEAKAGGGAVTAFARWI 344 >UniRef50_B5WKQ0 Transcriptional regulator, LysR family n=5 Tax=Proteobacteria RepID=B5WKQ0_9BURK Length = 302 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 54/296 (18%), Positives = 108/296 (36%), Gaps = 4/296 (1%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPT 60 + P +TL+A +A R AA++L +T AVS+ IK LEN G PL R T T Sbjct: 4 RLPPLQTLRAFEATARLLSMTLAAEELHVTHGAVSRHIKTLENHLGVPLFRRLTRRIVLT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 + G + + ++ + ++++ + + WL P L A P Sbjct: 64 DAGAEFHFAVARLLGELTREAESLRGHDNIASMTISTSVSFASKWLAPRLHRFKAIHP-E 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L++ ++ R + L G+V AV P +++ V S + E+ Sbjct: 123 LDVHLDVTDRNVD-LDDGQVDAAVRYGGGRYPRVQSERILEETVTPVCSPSYREEVGG-L 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + L + ++ D + + + + ++ A +G + Sbjct: 181 TNPAGLARCTLLHEDRMLANWEQWFAYADLDRSRRSRGPAYSHGSMAIEAAIRGEGVALG 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 + ++A+G L+ P + + + AL D+ +R+ Sbjct: 241 RSALVGDDIAAGRLVAPFPDIRLKVERGYDLVYRTGNRDHPKVCALRDWLAAEVRR 296 >UniRef50_C5SQF2 Transcriptional regulator, LysR family n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SQF2_9CAUL Length = 320 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 57/300 (19%), Positives = 105/300 (35%), Gaps = 10/300 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPT 60 + P L+ +A R F+ AA++L +T AVSQ+I+ LE G L VR + Sbjct: 5 RLPPLSALRVFEAAARHESFKHAAEELFVTPGAVSQQIRLLEEHVGVELFVRDGRRVVLS 64 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 + G+ +L++ E + ++++V A WL+P L A +P Sbjct: 65 DAGKASSIILKEAFEKMFEATRIMRQTQQKGRVTVSVAPSFAAKWLMPRLGDFSAANP-D 123 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 +++ V + + ++ A+ V+ L L V S E Sbjct: 124 IDVWVSADMAPTDFAVS-DIDLAIRYGTGNYNGLNVEHLLEEAVLPVCSPALYEA--API 180 Query: 181 VTRSALLKAPVVAF-----DHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGT 235 + L ++ D D +L+ + + N S ++ A G Sbjct: 181 RKPADLTHHTLLHDVSSDLDPSDPDWAMWLKAHGAEEIDASRGPRFNQSHMVIEAAVAGR 240 Query: 236 TCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 + E +L +G L L +H P++R +D+ R Sbjct: 241 GVALAKRTIAEADLRAGRLRGLFNEKDAPVSFGYHLVWPQTREPSMAQVRFMDWLRAQAR 300 >UniRef50_B2U8C9 Transcriptional regulator, LysR family n=27 Tax=Proteobacteria RepID=B2U8C9_RALPJ Length = 311 Score = 280 bits (718), Expect = 3e-74, Method: Composition-based stats. Identities = 54/292 (18%), Positives = 96/292 (32%), Gaps = 6/292 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPT 60 K P L+A ++ R F RA +L +T A+S++++ LE G L R T Sbjct: 3 KLPPLNALRAFESAARHLSFTRAGDELNVTHGAISRQVQALEAWLGVSLFRRLNRRVELT 62 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 + GQ+ L+ + + +L + WL+P L+ P R Sbjct: 63 DAGQRYLSEIGVALDRISTSSQALRDRDAARILRVNSIPTFTMRWLIPRLSTFQMRFP-R 121 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + +++ E L + + + V S E+ Sbjct: 122 VEVRLTTSIEEIEDL-PDHFDVIIRGGPEIHAGFRSGRFLDESRFPVCSPVLLERL--PL 178 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 T S L ++ D L + ++L +Q A G M Sbjct: 179 STPSELRHHTLLHSDTLPSVWPSWLVLAGVPNLRPAHALTFEHFYLSIQAAIDGLGVAMG 238 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHK 292 P I +L G L+ P L Y+ ++P + +V A + + Sbjct: 239 PSALITDDLEEGRLVAPFPNLALGARSYY-WYSPARNLGDEVVQAFCAWLGE 289 >UniRef50_B8H3M0 Transcriptional regulator, LysR family n=12 Tax=Alphaproteobacteria RepID=B8H3M0_CAUCN Length = 318 Score = 280 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 60/296 (20%), Positives = 99/296 (33%), Gaps = 11/296 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPT 60 + P L+A +A R F RAA +L +T AVSQ+I+ LE+ G L RT T Sbjct: 9 RLPPLNALRAFEAAARHLNFSRAADELSVTPGAVSQQIQNLEDYVGAALFKRTPKGLLLT 68 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 + Q L LR+ E L+L A WL+P L P + Sbjct: 69 DAAQTALPALREAFDRLAEAASLLTAAVDGRRLTLTAAPSFAAKWLVPRLGKFEQAHP-Q 127 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 +++ + + GEV A+ P V +L + V+S E+ Sbjct: 128 VDVWLSAGMEVVD-FATGEVDMAIRYGSGRYPGLEVIRLLHETVVPVASPELLEQN--AL 184 Query: 181 VTRSALLKAPVVAFDHLD-----DMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGT 235 L ++ D +L N S ++ A G Sbjct: 185 ERPEDLQHHILLHDGSPDADDSCPDWAMWLAARGIRGVDGARGPRFNQSSLVIEAAANGR 244 Query: 236 TCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGH 291 + + +L SG L+ Y+ P+++ A +++ Sbjct: 245 GIALAKRTLAQADLDSGRLVIPFEASTAVDFAYY-VVHPKAKGRLPQVKAFVNWLK 299 >UniRef50_B5XS26 Transcriptional regulator, LysR family n=6 Tax=Proteobacteria RepID=B5XS26_KLEP3 Length = 301 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 66/291 (22%), Positives = 111/291 (38%), Gaps = 6/291 (2%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRP 59 MK P L+ +A R ++AA +LC+T SAVSQ+I +LE PL +RT + Sbjct: 3 MKLPPLNALRCFEAAARLLSLKQAASELCVTASAVSQQIARLEEALNTPLFIRTPRQLQL 62 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 TE G+ L ++ L Q + P ++L+ + WLLP LA P Sbjct: 63 TEVGEIYLRAVQPAFLQIAAATQRLQVPAGPEKVTLSCTSGFAIQWLLPRLADFERRYP- 121 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 ++ +Q+ R + L G + AV P +L D + V S Sbjct: 122 KIEIQIGTTNRRVDLLSEG-IDFAVRHGVGGWPELQAYRLLDDDLIPVCSPQLIAPRRS- 179 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 LL+ P++ +H +D + + P + + S + A G + Sbjct: 180 LAGAGDLLQYPLLHDEHRED-WALWCEAVGLEPDRARRGPVFTDSNGVTEAAFAGMGMAL 238 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG 290 + I L G L++ L +H E+ ++ D+ Sbjct: 239 LRRSFIASALTQGRLVNPL-AQPIACPLAYHLVYHETALLAPANRCFRDWL 288 >UniRef50_Q0KCL9 Transcriptional regulator, LysR-family n=2 Tax=Cupriavidus RepID=Q0KCL9_RALEH Length = 302 Score = 279 bits (716), Expect = 6e-74, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 108/297 (36%), Gaps = 8/297 (2%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPP 57 M+R P LQA +A R F AA++L +TQ AVS++++ LE G L R Sbjct: 1 MRRLCPSLTELQAFEAAARHNSFTVAARELHVTQGAVSKQVRSLEAYLGVELFQRVRQRL 60 Query: 58 RPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPL-LLSLAVNADSLATWLLPALAPVLAD 116 T G++ L + E + +L +A A WL+P L A Sbjct: 61 MLTTAGERYLERIGPSLNELEAATVELMARQGRGGVLHIASMPTLGAKWLIPRLPQFFAR 120 Query: 117 SPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY 176 P + L+ + + ++ A+ P L D + + L V Sbjct: 121 HP-EVKLEFVPHAQGYD-FSEPDLDAAIRFGDGVWPGSLADYMTGREVLPVCRPGLLASE 178 Query: 177 -FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGT 235 T +ALL+ P++ + + + + + Q A G Sbjct: 179 PGGVAPTPAALLRYPLLHHTTVPEAWPDWFATLGVPTREAWSGARFDQFSLLTQAALSGL 238 Query: 236 TCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHK 292 +IP IE+ELA+G L+ P + Y+ + + + + + + + Sbjct: 239 GIALIPRCLIEEELATGALVVAHPAQVLAKKGYYLCYPEQKQHLPAL-RTFRAWVME 294 >UniRef50_Q0F1H8 Transcriptional regulatory protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1H8_9PROT Length = 297 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 53/294 (18%), Positives = 105/294 (35%), Gaps = 7/294 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 + P L+A +A R AA++L +T SA+S +I+ LE G L VR T Sbjct: 6 RMPSLNALRAFEAAGRHLNLRAAAEELFVTPSALSHQIRGLEEQLGVKLFVRQRHGLELT 65 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 + G++LL L E + + P +L++++ + W +P L P Sbjct: 66 QSGKQLLPELTAGFSRLVEAVAALRPIHHPGILTVSMLSTFAMRWFIPRLHRFQQAFP-H 124 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + +++ + + G V A+ P +L + V S P Sbjct: 125 IEVRISTSIELVDFEQEG-VDCAIRSGQGDWPHTASLRLLDEQFAPVCSPSLITAERP-L 182 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + L + ++ + D + +L + + A +G ++ Sbjct: 183 ARPADLAEYTLLHSNQRPDDWRIWLSAEGLPELVGAQQLHFETRNFAIAAAVRGLGVAIV 242 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRF---APESRMMRKVTDALLDYGH 291 L +++EL G LI R Y+ + ++ + L++ Sbjct: 243 DPLLVQEELKDGRLIQPFTHAVPTRSAYYLVWSERRKDTPELAAFRQWLVEEAA 296 >UniRef50_C5CR23 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CR23_VARPS Length = 314 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 58/292 (19%), Positives = 105/292 (35%), Gaps = 6/292 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P L+A +A R + AA +LC+T AVSQ IK LE G L R T+ Sbjct: 5 LPPLNALRAFEATARHLSVKNAADELCVTAGAVSQLIKSLELHLGIALFRRANRGIFLTD 64 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 GQ L +R + + +L+++ + WL+P L P + Sbjct: 65 AGQAYLPPVRNAFRQISDATRRIAMPAETGILTVSTTPFFASAWLVPRLKSFHDAHP-DI 123 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +LQV T + R G V A+ P + ++ ++ + V++ + Sbjct: 124 DLQVVSSTALADFSRDG-VDVAIRHGLGRYPGLISQRVLTVEIVPVATPALV-RQLGMPA 181 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 + + L + P V + + + S ++ G ++P Sbjct: 182 SPADLTRWPRVNDAERKG-WAMWFEAQGIEDARPARGPSFDDSGLLLKAVLAGQGAGLLP 240 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 + E+A G L+ L+ + Y+ +SR R A ++ Sbjct: 241 AALVADEVAEGRLVQLSEAAWLEDFAYYLVHPEDSRH-RPKVAAFREWIAAE 291 >UniRef50_A6UEA0 Transcriptional regulator, LysR family n=7 Tax=Alphaproteobacteria RepID=A6UEA0_SINMW Length = 297 Score = 276 bits (708), Expect = 5e-73, Method: Composition-based stats. Identities = 61/302 (20%), Positives = 117/302 (38%), Gaps = 12/302 (3%) Query: 1 MKR-----PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-T 54 MK PD TLQA + R F +AA +L +TQSAVS++IK LE+ G L R Sbjct: 1 MKLSRRLVPDVTTLQAFECAARHGSFTQAAAELNLTQSAVSRQIKDLESQLGVLLFERVR 60 Query: 55 VPPRPTEQGQKLLALLRQVELLEEE-WLGDEQTGSTPLLLSLAVNADSLATWLLPALAPV 113 ++ GQK L +R++ EE + + LS+A + WL+ L Sbjct: 61 QRVILSDAGQKFLPEVRRLLNQTEELMVRAMASARADSSLSIASLPTFGSRWLVQRLPDF 120 Query: 114 LADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFA 173 L P + + + + + A+ + L + + +S Sbjct: 121 LKRHPGTV-VNIASRSEPFD-FEEQNFDLAIHYGQPVWARAICSYLCSEVIVPAASPALL 178 Query: 174 EKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQ 233 + + + + +P++ + + + N G+ + + ++ A Sbjct: 179 AVH--PVASPADIGGSPLLHLATRPKLWAQWFETNDVEQDGAYRGNRFDQFSMVIEAATA 236 Query: 234 GTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 G ++P IE+EL +G L + Q Y+ PE ++ ++ A ++ + Sbjct: 237 GLGFALLPRYLIEQELTAGTLRIVLDRPMQTENSYYLAI-PEGKLENPISRAFREWITEQ 295 Query: 294 LR 295 + Sbjct: 296 VG 297 >UniRef50_Q39AZ7 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=Q39AZ7_BURS3 Length = 302 Score = 276 bits (706), Expect = 9e-73, Method: Composition-based stats. Identities = 54/295 (18%), Positives = 102/295 (34%), Gaps = 4/295 (1%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPT 60 + P +TL+A +A R AA++L +T AVS+ IK LE G L R T T Sbjct: 4 RLPPLQTLRAFEATGRLLSMTLAAEELHVTHGAVSRHIKNLETHLGVALFQRLTRRIVLT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 E G L + + + + + L + + WL P L A P Sbjct: 64 EAGAAFLLDVSRTLGDLTKAAERLRAHDSVTRLKINASVSFANKWLAPRLHRFKALHP-E 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L++ ++ + L GE A+ P L +++ V S + K Sbjct: 123 LDIHLDVTDAHVD-LNEGEADVAIRYGSGRYPRVLAERILEETVTPVCSPAYRAK-MDGL 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + ++ ++ D + + + S + ++ A +G + Sbjct: 181 ASVERIVDCTLLHEDRMLANWEQWFALAGIRGARSDRGPAYSHGSLAIEAAMRGEGIALG 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 + + ++A+G L+ P + AL D+ + +R Sbjct: 241 RSVIVADDIAAGRLVAPFPQYALQAERGHDLIYRIGSKDDPKVCALRDWLAEEIR 295 >UniRef50_A6T0X1 Transcriptional regulator, LysR family, glycine cleavage system n=19 Tax=Bacteria RepID=A6T0X1_JANMA Length = 311 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 113/294 (38%), Gaps = 12/294 (4%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT--VPPRP--TE 61 L+A +A R + F AA +L +T +AV Q ++ LE+ G PL R+ R TE Sbjct: 7 LNALRAFEASARHQSFSAAAAELNVTPAAVGQLVRSLEDWLGTPLFNRSASGRARLIATE 66 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 Q+ L +R L + G+ +L++ V+ A WLLP + A P Sbjct: 67 AAQRALPEIRAGLDKLSLGLERLKEGAINGVLTVTVSPAFAAKWLLPRIDTFQAAWP-DT 125 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +++++ + + + G + V + + +KL + V S + Sbjct: 126 DVRLDTSLKPVDFVALG-IDIGVRYGNGDWAGLIAEKLLDEEIYPVCSP-LLLRQKQRLR 183 Query: 182 TRSALLKAPVVAF----DHLD-DMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 + L K ++ H D + +L+ ++ +N+S A +Q A G Sbjct: 184 KPTDLGKETLIHDLSIESHKDFPSWKQWLKVAGVDHTETMRGMRINNSAAVLQAAIDGQG 243 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG 290 + + ++A+ L+ L P + L + R A D+ Sbjct: 244 IALARSVMARDDVAASRLVRLFPDIKFTSPLAYFIVYRAERASLPRLAAFRDWL 297 >UniRef50_D0IY54 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0IY54_COMTE Length = 314 Score = 275 bits (704), Expect = 1e-72, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 111/294 (37%), Gaps = 5/294 (1%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRPTEQG 63 + L+ V + + + AAQ L +T AVSQ+I+ LE+ G LL R R TE G Sbjct: 24 PLQALRTFVEVGQRKSVKAAAQALHVTPGAVSQQIRVLEDRLGVVLLERERLGMRLTEAG 83 Query: 64 QKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNL 123 + LR+ L ++ + + L+++ A A+WL+P L P + + Sbjct: 84 ASVHPRLREAFLQIDQAMHALERSKGRRSLTVSTVATFAASWLVPRLGRFKQLHP-DIEI 142 Query: 124 QVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTR 183 +VE + + L+R V A+ P V L A V+S F + + Sbjct: 143 RVEATSELVD-LQRDRVDIALRHGLGDYPGLEVTCLMAPVLTPVASPEFLKTCRGAVINE 201 Query: 184 S-ALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 + L P++ D + ++ A G ++P Sbjct: 202 AGDCLDYPLLHDGDRADWPLWLKAHGVADDARAQRGSAFEDDFLLIRAAEAGQGLALVPQ 261 Query: 243 LQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 ++E+A+G L+ + + R Y+ P R A LD+ Q Sbjct: 262 AYAQEEIATGRLVQVLDKPWPARFAYYAVTRP-GAADRSEVRAFLDWIRAEAAQ 314 >UniRef50_A6VD26 Transcriptional Regulator, LysR family n=27 Tax=Gammaproteobacteria RepID=A6VD26_PSEA7 Length = 309 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 65/297 (21%), Positives = 113/297 (38%), Gaps = 9/297 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPT 60 + P LQ +AV R F RAA++L +TQSA+S+++ QLE L R + T Sbjct: 6 RLPSMTALQCFEAVARHLSFTRAAEELSLTQSAMSKQVAQLEEQLQHALFRRVRKRLQLT 65 Query: 61 EQGQKLLALLRQVELLEEEWLG-DEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP- 118 G+ LA +R++ E G +L +A A WL+P L P Sbjct: 66 PAGELYLAEVRRILQQVELSTRFLLSYGGETEVLRVATPPTFGARWLIPQLNGWRHRHPN 125 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 I L+L+ E E + LR+G A LP +L + + V + Sbjct: 126 IHLDLRQELEP---DDLRQGHCDLAFFFGPGTLPGAECIRLFGEELVAVCAPALLPAGGL 182 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 + + L ++ + + G ++ ++ A+ G Sbjct: 183 DE--PTQLAGLVLLQNASRAEAWHDWFASLGRNCQGCYHGPRFDTFYMCIRAAQAGCGVA 240 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 ++P +E+ELA G+L P + Y+ + PE +++ + L Sbjct: 241 LLPRFLVEEELAEGKLAIAWPHALPSQEAYYLAY-PEHAAEVPKVRHFVEWMRERLG 296 >UniRef50_A0K446 Transcriptional regulator, LysR family n=12 Tax=Burkholderia cepacia complex RepID=A0K446_BURCH Length = 305 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 107/297 (36%), Gaps = 6/297 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPT 60 + P L+A +A R + AA++L +T AVSQ I+ LE G L R T Sbjct: 5 RLPPLNALRAFEAAARHLSVKSAAEELSVTPGAVSQMIRTLETHLGVQLFERVNRGILLT 64 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G+ L +R + + +L+++V + WL+P LA P Sbjct: 65 AAGRDYLPPVRNAFRQIADASQRVSGAADSGVLTVSVTPFFASAWLVPRLAQFRQACP-D 123 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 ++LQV + R G V A+ ++L ++ + ++S + Sbjct: 124 VDLQVLTSHALADFARDG-VDVAIRHGLGRYIGLCSERLLTVEIVALASPGLVARLG-MP 181 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 T + L+ P + H F Q G + S +Q G ++ Sbjct: 182 ATPAELVGWPQLHDAERKGWHIWFGAQ-RIDDFGPPRGPAFDDSGLLLQAIVAGQGAGLL 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 P + ELASG L+ L + Y+ + P R A + + D Sbjct: 241 PAAMVRGELASGRLVQLADVAWLDDFAYYLVYPPH-HAERPKVAAFRRWILDAAQAD 296 >UniRef50_Q0HTP8 Transcriptional regulator, LysR family n=19 Tax=Alteromonadales RepID=Q0HTP8_SHESR Length = 320 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 109/297 (36%), Gaps = 10/297 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPT 60 P L+A ++ R + A+++L +T A+S++I+ LE G L VR T Sbjct: 22 SLPPLNALRAFESAARLQSMTLASKELHVTHGAISKQIRVLEEFLGFALFVRLHKKVALT 81 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQT-GSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 ++ ++ L ++ D ++ GS P L++ V WL+P + + P Sbjct: 82 DEAKRYLPHVQAALQTLSSATADLRSQGSRPQTLAINVLPSLTINWLIPRMEQFKSRHP- 140 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 L + + + +G A+ Q KL D V + A P Sbjct: 141 HLYVDLSIGDFAVD-FSQGRYDIAIRSSTQLPRGVNYIKLMDEDLCLVCAPSLA----PK 195 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 + + + ++ ++ + + + + V Q A G + Sbjct: 196 LKSIEDINQVTLLKHTTRPELWEYWADKVGLV-LTQAQTFGVEHFYMLSQAAASGMGAAL 254 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 IP IE +LA+G L+ F Y+ P+S + A +D+ ++ Sbjct: 255 IPRFFIEDQLANGNLVIPFQAPFTSPYAYYLL-TPKSPSLPLKVQAFIDWMLELFAP 310 >UniRef50_Q7MF54 Transcriptional regulator n=20 Tax=Proteobacteria RepID=Q7MF54_VIBVY Length = 307 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 114/296 (38%), Gaps = 8/296 (2%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQGQ 64 + L +V+ F AA++L +T+SAVS+RI LE+ G LL RT TE G+ Sbjct: 5 FSDLPIFVSVVECGSFSSAAKQLHLTKSAVSKRINHLEDKLGSRLLNRTTRKLSLTEAGE 64 Query: 65 KLLALLRQVELLEEEWLGDE--QTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 + Q L + + G L + + P ++ L+ P ++ Sbjct: 65 RYYEYAAQALNLARQGVDAVTELQGEPRGRLKITAPMTFGVLHVAPLISEFLSRYP-KVE 123 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 + ++ E + + + G + I H + + +L + +S + + Sbjct: 124 VDLQLEDQMVDLVA-GRFDLGIRIGHLPDSNLIAKRLAPCRTVLCASPDYVSRMGSPSK- 181 Query: 183 RSALLKAPVVAFDH-LDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 + L + + + + FL Q + IVN+SEA + G +P Sbjct: 182 PADLAQHNCLRYSYFRGGNEWLFLNQGNEYKVLPKGNFIVNNSEAIRRALLAGIGIAQMP 241 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 I KEL +L++L P + + PE + M +D+ ++ L D Sbjct: 242 TFIIGKELRDRKLVNLMPEYQLPQHFLYA-VFPERKHMPLKVRMFIDFLNEKLGSD 296 >UniRef50_A8TRJ4 Transcriptional regulator, LysR family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TRJ4_9PROT Length = 301 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 59/296 (19%), Positives = 102/296 (34%), Gaps = 5/296 (1%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P LQA +A R A+++L +T SAVS R++ LE G L R T+ Sbjct: 6 LPPLSALQAFEATARRLSVRDASEELRVTPSAVSHRLRNLETAIGVKLFHRLNRQLILTD 65 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G L+ + + + L+L WLLP L+ L+ P + Sbjct: 66 AGSVYLSRVAPAFDALRSATSEIAERGSADTLTLTAPPSFAEIWLLPRLSRFLSAHP-DI 124 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +L+VE +R + R V ++ P + KL + V + + + Sbjct: 125 DLRVEASSRAVD-FSREPVDASIRYGRGDWPGLVARKLVEEQLVAVCAPS-LQTGTYDVT 182 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 L + ++ D A+L+ + + S ++ A G + Sbjct: 183 EPGDLARHTLIHSDQRLTSWTAWLRSHGHGTVKGDRNLRFSQSAHSLRAAADGLGVALES 242 Query: 242 HLQIEKELASGELIDLTPGLFQ-RRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 + L +G L++ P L +H P R M AL + Sbjct: 243 RIMAAAYLDAGTLVEPFPDLAPADDGAAYHLVVPPDRSMLPKVRALDSWLTDEAGS 298 >UniRef50_A3Y684 Transcriptional Regulator, LysR family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y684_9GAMM Length = 302 Score = 270 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 114/297 (38%), Gaps = 6/297 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 K P ++L+ ++V R + F +AA +LC+T SAVS +IKQLE L R T Sbjct: 4 KLPSLKSLRVFESVARNKSFRKAADELCVTHSAVSHQIKQLEQELDVFLFQRNGRSINLT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 +QG+ L ++ E + ++ S L++ WL+P L A P Sbjct: 64 KQGEFLYPVINDSFDNIAEAVASLKSASKTKTLTIQTYVTFGTVWLIPKLNDFQAKYP-D 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + +++ + + + + +A L ++ V S + Sbjct: 123 IRVRISISFVDVDFDKDDVD-VGIIMGDKAWSHLDYTYLFDMEIFPVCSPKLVAE--GKL 179 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 L K ++ + D +L++ P +V++ +++ +G + M Sbjct: 180 NKPEDLAKLDLITVELAPDDWPTWLEKAGVDPHVIDSGPVVDNYLQALEMIYEGNSVVMA 239 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 +++L +G +I W+ P+ + + D+ + +R+D Sbjct: 240 RESFAKRDLETGRIIRPFDFSVMEVGS-WYSVHPKQQNPKPEIQLFNDWLAQKIRED 295 >UniRef50_Q1R0L5 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1R0L5_CHRSD Length = 327 Score = 270 bits (691), Expect = 5e-71, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 96/295 (32%), Gaps = 13/295 (4%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P L + F RAA+ L +T +AVSQ+I+QLE+ G L +R T Sbjct: 5 LPPLGALHCFEMAAHHGSFARAAKALTLTPAAVSQQIRQLESRLGTTLFLRHPRSVELTP 64 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G++ + P L++A A WL+ L P L Sbjct: 65 AGREYATAIGLALDQIAVATERVVGHHAPHRLTIATTPAFAAKWLVSRLIDFQGRYP-DL 123 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +++ + R+ ++ A+ P L D V S + P+ + Sbjct: 124 EVRLVTSNSLADMARQ-DIDVAIRYGQGRWPGLEATPLMHTDLFPVCSPALLAR-GPSLI 181 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGS------VPCHIVNSSEAFVQLARQGT 235 S L + ++ H D +L+ L P + +Q A G Sbjct: 182 RLSDLREHVLLRLMH--DEWPTWLRHMGILEGEELETGEWRPGPRYADAGLMIQAALAGQ 239 Query: 236 TCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG 290 + + + +LA+ L+ YW P + + A + Sbjct: 240 GVALGQRVLVADDLAAKRLVRPFEATLPSAQSYWLVMQPGNAGL-PKVRAFQAWL 293 >UniRef50_Q2BQI7 Hypothetical D-serine deaminase activator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQI7_9GAMM Length = 310 Score = 270 bits (691), Expect = 6e-71, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 113/293 (38%), Gaps = 12/293 (4%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQGQ 64 LQ + + F RAA +L +TQ A+SQRI++LE G L +R + T +G+ Sbjct: 14 LANLQCFSSAAKHLSFTRAADELNLTQGAISQRIRKLEEQLGFALFLRYNRRLQLTAEGE 73 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQ 124 +LL + + D T LSL+ + WLL LA P ++ + Sbjct: 74 RLLIQTNNSLTELDNLIRDIHTQGLAGELSLSTPPSFASEWLLEKLADFSQHFP-QIFFR 132 Query: 125 VEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRS 184 +E +R + ++ A+ P + L + V + FA+KY Sbjct: 133 METHSRLVDFFSE-QIDLAIYYGQGEYPGLVCWHLMDEQLIPVCTPEFAKKY-DLWSRPE 190 Query: 185 ALLKAPVVAF-----DHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 L ++ + ++ + L H + SE V+ A+ G + Sbjct: 191 QLNHCHLLHDAQAWPEAGPYSEWSYWAERQSLNLELKQGHCFDKSEHAVKAAKAGLGVAI 250 Query: 240 IPHLQIEKELASGELIDLTPGLF--QRRMLYWHRFAPESRMMRKVTDALLDYG 290 IEK L +GELI+ GL + Y+ E R + + A ++ Sbjct: 251 GRKQLIEKYLNNGELINPFDGLPSVLSQQNYY-LVTHEDRKEQPIIKAFREWL 302 >UniRef50_A9IQK9 Transcriptional regulator, LysR-family n=6 Tax=Burkholderiales RepID=A9IQK9_BORPD Length = 306 Score = 269 bits (690), Expect = 7e-71, Method: Composition-based stats. Identities = 69/297 (23%), Positives = 112/297 (37%), Gaps = 10/297 (3%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPP 57 M+R P LQA + R F RAAQ+LC+TQ AVS+++K LE+ G L +R Sbjct: 1 MRRFCPSLTDLQAFEVAARHSSFTRAAQELCVTQGAVSKQVKHLESFLGVELFLRIRQGL 60 Query: 58 RPTEQGQKLLALLRQVELLEEEWLGDE-QTGSTPLLLSLAVNADSLATWLLPALAPVLAD 116 TE GQ L ++ E + L L A WL+P LA + Sbjct: 61 VLTEAGQSYLKKIQAGLGQIEAATVELIAHQGQGGTLHLTCMPTFGARWLIPRLATFMRV 120 Query: 117 SPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY 176 P ++++ + + E+ AV P D + D + V S Sbjct: 121 RP-DIHVEFLPHRQGYD-FSTPELDAAVRFGDGIWPGSGADYIVGRDIVPVCSPRLL--- 175 Query: 177 FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 + LL+ P++ + + + +Q ++ + Q A G Sbjct: 176 GDGCQSADELLRYPLLHHTSALEGWRDWFEQAGCDTRRALEGARFDQYSLLSQAAAAGFG 235 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 +IP IE EL G+L + R Y+ + PE + + A + +V Sbjct: 236 IALIPRCLIEDELRDGKLAVALRLPIRARQGYYLCY-PEQKANLPILQAFRAWLMEV 291 >UniRef50_A1UWF0 Transcriptional regulator, LysR family n=50 Tax=Burkholderia RepID=A1UWF0_BURMS Length = 343 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 66/298 (22%), Positives = 107/298 (35%), Gaps = 12/298 (4%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 + P +TL A +A R F AA++L TQ AVSQR+ QLE G PL R T Sbjct: 50 RLPPMQTLSAFEAAARLASFTAAARELGSTQPAVSQRVVQLEEDLGTPLFERGRRGVTLT 109 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 E G +L A +RQ D ++ +L + WL+P L + P Sbjct: 110 EDGTRLFAAVRQSLDALRAATADIRSRRANGTFTLVTDFGFATYWLMPRLDDLKRAMP-G 168 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 ++++V +R A+ P C +L V S F + + Sbjct: 169 VDVRVVTSQDIDP--QREHADVAILFGAGDWPGCTSTRLFQEHVTPVCSPAFRTAH-ADI 225 Query: 181 VTRSALLKAPVVAFDHLDD----MHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 + LL+AP++ + + + P NS +Q A Sbjct: 226 ARPADLLRAPLLHVQPTRPERWLAWRDWFDAHGLAAPPEPHGLTFNSYSLVIQAALMNQG 285 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHR---FAPESRMMRKVTDALLDYGH 291 + ++ +A+G+L+ L Y+ PE+R + LL Sbjct: 286 VALGWAPLVDTPIAAGQLVRLVDAPVVTPRGYYLVLPPARPEARAVPLFRRWLLGACA 343 >UniRef50_A9CIB6 Transcriptional regulator, LysR family n=2 Tax=Agrobacterium tumefaciens RepID=A9CIB6_AGRT5 Length = 300 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 58/289 (20%), Positives = 107/289 (37%), Gaps = 6/289 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTE 61 P + LQA +A R R A+ +L +T AVS +I++LE G L R + T Sbjct: 5 LPSLKGLQAFEAAARYRSVTLASNELNVTPGAVSLQIRELEARLGVQLFFRKPRSIQLTR 64 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 +G++ LR + E + S +L+L+ WL+P L P + Sbjct: 65 EGERYYGALRTAFRMMREATAELTARSEITVLTLSCTPTFAVQWLMPRLPSFQQQHP-HV 123 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 ++++ R + R +V AV + L V + EKY P Sbjct: 124 DVRISVTNRLVD-FSRDDVDLAVRHGFGRYEGLESIRFIDDSTLPVCAPQLLEKYGPLRE 182 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 L P++ ++ ++ + +L+ + + S + A+ G + Sbjct: 183 -AGDLKSVPLLHDENRNE-WRRWLEAAGASEVDASGGTVFIDSNGALDAAKAGHGIALTR 240 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG 290 + +EL G LI + Y+ + P + L+D+ Sbjct: 241 RSLVSRELVEGALIAPFGTDMASTLAYFLVY-PRRMLDNPDLVTLIDWM 288 >UniRef50_A9AEG5 LysR family glycine cleavage system transcriptional activator n=69 Tax=Burkholderiaceae RepID=A9AEG5_BURM1 Length = 348 Score = 267 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 102/295 (34%), Gaps = 7/295 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRPTE 61 P ++A +A R F RAA +L +T AVS +++ LE+ G L R T+ Sbjct: 6 LPALNAIRAFEAAARHENFSRAADELFVTHGAVSHQVRALEDELGVKLFTRNGKRLCLTD 65 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G + +R ++ + + L +++ + A ++ P + + P + Sbjct: 66 AGMRYAQQVRTALMMLADATRQVRASDRDRRLVVSMLSSFAARFVTPRIGTFIERHP-EI 124 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +++++ + R +V A+ + P V+ L + + Sbjct: 125 DVELQSTNALTD-FARDDVDLAIRFGFGSYPGLYVEPLLDEAFFPACAPTL--NGGKLPQ 181 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 T + L+ ++ D + F D + S +Q A +G ++ Sbjct: 182 TPADLVHYNLLRSDD-ELWRPWFDAAGLDTLTEPKRGILYQDSSNLLQAAIEGQGIALVR 240 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 +L G L+ L Y+ P + A + + + Q Sbjct: 241 RSLALHDLLDGRLVRLFDIDGPSPWHYFF-VCPPPLLGTPRVQAFRTWILQEVAQ 294 >UniRef50_B8IVZ6 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IVZ6_METNO Length = 311 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 115/296 (38%), Gaps = 7/296 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPPRPT 60 + P ++ L A +A R F RAA +L +TQ A+S++I+QLE L R T Sbjct: 7 RMPSFQELTAFEAAGRHGSFTRAADELALTQGAISKQIRQLETTLETVLFERAKGRVMLT 66 Query: 61 EQGQKLLALLRQVELL-EEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 G+ LL + ++ + + + L LAV WL+P L LA P Sbjct: 67 AAGRALLPTVGRLLQDYVTAAHSVMASAGSEVTLKLAVLPTFATRWLIPRLPRFLASHP- 125 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 + + + E + + + V A+ +L + VS +AE+Y Sbjct: 126 HITINLVTEPEPFDLMAQ-SVDAAIHFGAPNWAQADCIRLCDEAVVAVSGPAYAERY--A 182 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 + L++A ++ + + + + P + + ++ A+ G + Sbjct: 183 LNCPADLVRATLLQQASRPGLWRDWFAAMGFVHPFPFRGPLFDQFAMTIEAAKVGIGIAL 242 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 +P +E+ELA G LI + L Y+ + R + + +D+ Sbjct: 243 LPSFLVEQELADGSLIQIAAPLLTGSGSYYIVVPIDRRREFTIV-SFVDWLVAEAA 297 >UniRef50_C7CHT6 Transcriptional regulator, LysR family n=3 Tax=Methylobacterium extorquens group RepID=C7CHT6_METED Length = 312 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 65/300 (21%), Positives = 104/300 (34%), Gaps = 16/300 (5%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPT 60 P TL+A +A R F AA +L +T +A+S +I+ LE G L R T R T Sbjct: 6 SLPPLATLRAFEAAGRRLSFRGAADELGVTPTAISHQIRLLEQTLGLRLFHRETRRVRLT 65 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 +G LL +LR E + + +L+L+ +A WL+P LA A P Sbjct: 66 AEGAVLLPVLRDGFDAFAEAIDQIRGRRAAGVLTLSAPTAFVAKWLVPRLADFRAAHPA- 124 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 +L++ + R G V AV +L A S A + Sbjct: 125 CDLRLHASDSLIDFARDG-VDVAVRYGPGPYSDFDAHRLLAERVTPACSPHLAIRSVG-- 181 Query: 181 VTRSALLKAPVVAFDHLD-----DMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGT 235 L ++ F+ A+L+ + +Q A G Sbjct: 182 ----DLRHHTLLHFEWPRLTDETPTWPAWLRHAGVTGVDGRAGIRFSDEGHVIQAAIAGQ 237 Query: 236 TCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 ++ + EL SG L+ G YW P + + + L+ + Sbjct: 238 GIALLSDVLTADELTSGALVQPF-GPVLDAHPYW-VVRPRHSVRKADVEKLVSWLVAAAA 295 >UniRef50_B1KBZ9 Transcriptional regulator, LysR family n=33 Tax=Proteobacteria RepID=B1KBZ9_BURCC Length = 343 Score = 266 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 53/289 (18%), Positives = 104/289 (35%), Gaps = 6/289 (2%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQ 62 P L +A R + RAA++L ++QSA+S++++ LE+ G PL R TE Sbjct: 55 PSMSLLLVFEAAARHESYTRAAEELSLSQSAISRQVQTLEDQLGVPLFRREGRSVKLTEV 114 Query: 63 GQKLLALLRQVELLEE-EWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G++ A L L + L LA + WLLP L A + Sbjct: 115 GRRYFAELSGALGRIRGATLQAMSHQAGAGTLRLATLPTFGSKWLLPHLHGFYAAH-SGV 173 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 + + + L ++ A+++ P +L + ++ + Sbjct: 174 TVHLHSRIGAIDFLND-DLDAAITVGAGDWPGLHAHRLYNEFLIAIAPPDTGRGRKADAR 232 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 T + K ++ + + +Q R G ++P Sbjct: 233 TPAWAAKQTLLGVTSNQQAWAEWFSHYRLDHRQMRIGPSFELTSHLIQAVRAGMGIGLVP 292 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG 290 + +E EL+ GEL+ + + + Y+ + P + + + A D+ Sbjct: 293 KVLVEDELSRGELVSIGDAIT-SQRSYYLVYPPGNETLPSLV-AFRDWL 339 >UniRef50_Q5VM55 Putative LysR-type transcriptional regulator n=1 Tax=Marinomonas mediterranea RepID=Q5VM55_9GAMM Length = 288 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 98/289 (33%), Gaps = 9/289 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P L+A + R F AA +LC+TQ AVSQ+I+ LE+ G PL R T Sbjct: 6 LPPLNWLRAFEVSARHLNFTHAAAELCLTQGAVSQQIRLLEDHLGIPLFKRLPRGLSLTS 65 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 +GQ L +++ + + + + WL P L P Sbjct: 66 EGQSYLPVVQDAISRLAAATSELVNKDAHKPIKIHGSLSFFVHWLAPKLTDFKLRYP--- 122 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 N+ + T + + + P +V +L V + + Sbjct: 123 NIDIRYTTSLWVDEVDDDHELEIRWGNGDWPGLVVRRLTWDTLFPVCAPSLLDT----ID 178 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 T S L ++ ++ +L + V++ A +++A G + Sbjct: 179 TPSDLAAQTLLHTIGYEEGWGYWLSMVGEQTVDPAKGMQVDTLLAALRMAELGLGVALAR 238 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG 290 E +A G+L++L ++ + + + L++ Sbjct: 239 SSMAEDLIAEGKLVELFDKRLNASESFYLVHKTGTE-LSDDVNVFLEWL 286 >UniRef50_A8TTL8 Transcriptional Regulator, LysR family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TTL8_9PROT Length = 294 Score = 265 bits (680), Expect = 9e-70, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 104/292 (35%), Gaps = 6/292 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPPRPTE 61 P TL+A DA R F RAA L +T AVS++I LE G + RT PTE Sbjct: 4 LPPLNTLRAFDAAARHGSFSRAADALNVTHGAVSKQIASLEAFLGVTVFERTAHGLEPTE 63 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G L ++ + E + + +TP L+++V A WL+ + L P + Sbjct: 64 AGAVLAPIVAEALDAMAEGVRRVRRSATPSTLTISVLPSFAAHWLIHRMPRFLDRHP-EI 122 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +++ R + L + +V A+ P + V + A + + Sbjct: 123 DVRFFTTRRVVD-LTKEDVDLAIRYGLGDWPGVHAECFMRETLTPVYAPALAALH--PEL 179 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 + LL+ + + + + P + + + +Q G + Sbjct: 180 EPTDLLRFTIHSHHTDASNWKLWRIGMGLPDSDLPPVAVYDDTALAMQAVLGGQGVILGR 239 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 I LA+G L+ L+ + E R A D+ + Sbjct: 240 SPLITDALAAGRLVRLSEVDIPSAESDY-LVCLERHRARPAIKAFRDWLIEE 290 >UniRef50_C9NUL4 D-serine dehydratase transcriptional activator n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NUL4_9VIBR Length = 313 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 106/297 (35%), Gaps = 11/297 (3%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQGQ 64 L + R F AA +LC+T SAVS +I +LEN L R T G+ Sbjct: 18 LSKLYTFEVAARLGSFALAAHELCLTPSAVSHQISKLENELKLQLFERQHRKVTLTADGE 77 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQ 124 +L + + ++G L++ WL P L P ++++ Sbjct: 78 QLFTSVTLALSQLNSSIEQVKSGHISGGLTIYARPSFAHDWLAPRLHDFCEQYPS-IDIK 136 Query: 125 VEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRS 184 + T + R G + A+ + + KL + V S +A +Y N TR Sbjct: 137 LITGNDTLDLNRHG-IDLAIYYSNVTPDASWSLKLNEEHVIPVCSPHYANQYALNDETR- 194 Query: 185 ALLKAPVVAFDHL------DDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 L ++ + D + + + + + + S V A+ G Sbjct: 195 DLSHCTLLHDNQAWHIHSQLDEWKYWHEHYAEFDIQNCRSVGFDQSTLAVSAAKHGAGIA 254 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 M +++++ G+L+ P + Y++ + R + D+ + L+ Sbjct: 255 MGRWSLVKEDIERGDLVMPFPNRLIKSGYYYYLIGVQ-RTISAKQKCFADWISRQLQ 310 >UniRef50_Q39LC6 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q39LC6_BURS3 Length = 341 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 58/298 (19%), Positives = 111/298 (37%), Gaps = 8/298 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P L A +A R F AA++LC+TQSA+S++I+ LE G L VR+ T+ Sbjct: 48 LPPLSYLTAFEAAARHESFTSAAEELCVTQSAISRQIRLLEETLGCALFVRSHKAVSLTD 107 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G+K + L + + ++ ++++ + + WL+P L A+ P + Sbjct: 108 GGRKFQRTVNAALDLLAAAAYELRVQASTSTVTVSADLAIASHWLIPRLPKFRAEHP-EI 166 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 + V+ +R G A+ P+C L + V + + + P Sbjct: 167 IIHVDASDEDTRNIREG-ADLAIQFGDGYWPACNARFLLEEEIFPVCTPAYLARLAPMAH 225 Query: 182 TRSALLKAPVVAFDHLDD---MHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 TR LL+A ++ + + + +N+ A +Q A G Sbjct: 226 TR-DLLRATLIHLETRHWDWMDWATWFAHHDIALTEPRQDLYINNYPAVLQAAMGGQGIA 284 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 M + LA+G L+ + ++ P ++ D+ + Sbjct: 285 MGWRYLADDMLATGVLVRPIETSVRTGRGFYLL-HPSDTLLSPEARIFCDWIVGQCAE 341 >UniRef50_A8TZX1 Fumarate hydratase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TZX1_9PROT Length = 305 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 100/302 (33%), Gaps = 10/302 (3%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRP 59 M+ P L+A +A R RAA++L +T SAV +I+ LE G+PLL R P Sbjct: 1 MRLPSLNALRAFEAAARLGSLTRAAEELHVTPSAVRHQIRALEEEIGRPLLRRNGSGLMP 60 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 TE L LR+ + + +T L+++ ++ WL+P L P Sbjct: 61 TEAANGSLGHLRRAFDALADANRSLRHPATAPTLTVSAVPSFVSAWLIPRLEGFQRRFP- 119 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 + +Q+ + R G V A+ P +L + Y V + + Sbjct: 120 GVTVQIGTNALPTDFHREG-VDLAIRYGLGGYPGLFECRLFSERYFPVCAPYLLDG-PTP 177 Query: 180 GVTRSALLKAPVVAF-----DHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQG 234 L + ++ S Q A Sbjct: 178 LAEPGDLARHTLLHSSVLPRSGWPVWRDWLDAAGVLAQVDPDAGTHYTMSMFAYQAAMAC 237 Query: 235 TTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 + + LA+G L+ Y PESR R + A +++ + Sbjct: 238 QGVALGTTVLSMDMLAAGYLVKPFDMELPTAFGYHIVCPPESRE-RPLVAAFIEWLLEAA 296 Query: 295 RQ 296 + Sbjct: 297 GE 298 >UniRef50_Q2RNY3 Transcriptional regulator, LysR family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RNY3_RHORT Length = 307 Score = 264 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 53/293 (18%), Positives = 97/293 (33%), Gaps = 8/293 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTE 61 P L+A A + F +AA+ L +TQ+AVS +I+ LE+ G L R TE Sbjct: 5 LPPLNALRAFTAAAKRLSFTQAAEDLGVTQAAVSHQIRGLEDWLGVALFRRRNKQVVMTE 64 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTP-LLLSLAVNADSLATWLLPALAPVLADSPIR 120 GQ + Q E +L+++ WL+ L + +P Sbjct: 65 AGQVYALAIGQALDEIAEATAALVRNDPRAGMLTISTMPSFAIKWLVQRLGGFINANP-D 123 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + +++ G + A+ + + D L + V S P Sbjct: 124 IEVRLHTTRELVNFATEG-IDVAIRMTREVGDDLHADLLLEEELFPVCSPALMRGIRPLR 182 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 S L + ++ + ++L L S +Q + + Sbjct: 183 Q-PSDLSQHLLLQDVGIS--WVSWLDPAGALDVRPARGPGYLDSALAIQACIESQGVMLG 239 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 + +E +L +G L++ M YW P + R A ++ Sbjct: 240 RTVMVEDDLKAGRLVEPFTLRVPSPMKYW-LVCPPGHLARPGVRAFREWILAE 291 >UniRef50_C6P3G3 Transcriptional regulator, LysR family n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3G3_9PROT Length = 299 Score = 264 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 107/297 (36%), Gaps = 11/297 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 P L+ +A R R F RAA++L +T +AVSQ+IK LE+ G L R E Sbjct: 5 LPPLNALRFFEAAARHRSFIRAAEELHVTPAAVSQQIKLLEDHLGVALFNRGKTLVLNES 64 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 L L+ E + ++GS L+++ A WL+P L P + Sbjct: 65 AHDALHLVSDAFDQLERAMLRVRSGSIAGPLTISTPPVFAARWLIPRLNDFYLRYP-DVE 123 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 + + R + EV A+ P V++L + V++ A + T Sbjct: 124 VHLLATRRIVD-FSMEEVDMAIRFSSDPHPGLSVERLMPEWIVAVATPELAA----SIKT 178 Query: 183 RSALLKAPVV----AFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 + LL A ++ + + ++ +Q A G Sbjct: 179 PADLLHADLIEDDWHIMRGTFPEWKTWLAGLGVVDAPLNVRRFGDADLAIQAAVNGLGVT 238 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 + H ++ +L SG L+ + G L + P ++ M A + + Sbjct: 239 LAWHSLVQNDLGSGRLVQIL-GHNIASDLSYQLVMPRNKSMLNKVAAFRAWLFEQAA 294 >UniRef50_B2IKM7 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=B2IKM7_BEII9 Length = 306 Score = 264 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 66/299 (22%), Positives = 119/299 (39%), Gaps = 7/299 (2%) Query: 1 MK-RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP 59 MK P TL+A +A R F A+ +L +TQSAVS +I+ LE ++G L R + Sbjct: 1 MKELPPTPTLRAFEAAARHPTFTAASAELNVTQSAVSHQIQYLEELWGMKLFERGRTLKL 60 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 T +G L ++RQ + + L + L +++ + WLLP L + A P Sbjct: 61 TTEGNALAPIIRQFLVSLDATLAGLRRQRDRHPLRISLTQSFASRWLLPRLPSIEASQP- 119 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 L L +E +G+ AV + + L V+SK ++ Sbjct: 120 DLQLWIETTDHPI-GFGQGDADIAVRLGTGQYSGLFAELLLREYIFPVASKQLLDRLG-M 177 Query: 180 GVTRSALLKAPVVAFDHLD--DMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 T + LL+ P++ D + + ++ + + ++ A G Sbjct: 178 PNTPADLLRYPLLFRAGPDLVPKWEYWFERAGVDVSLAHSGTYYPDTNMTIEAALAGYGI 237 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 ++ +EKEL G LI L + + Y+ P+ R + ++ + +Q Sbjct: 238 ALVRSGHVEKELRDGLLIRLLTVRYPSPLAYYF-VCPKGRERLPAIASFKEWIVQEAQQ 295 >UniRef50_C6C726 Transcriptional regulator, LysR family n=17 Tax=Gammaproteobacteria RepID=C6C726_DICDC Length = 335 Score = 264 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 108/296 (36%), Gaps = 8/296 (2%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQG 63 D+ +L AV+ F A ++L +++SAVS+R+ QLE G LL RT TE G Sbjct: 3 DFSSLPVFVAVVESGSFSAAGKRLNLSKSAVSKRLSQLEERLGVRLLHRTTRQLSLTEAG 62 Query: 64 QKLLALLRQVELLEEEWLGDE--QTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 ++ L ++ L ++ + P L L P + Sbjct: 63 SDYYDYAQRALQLAQQAEDAVTQLQERPQGTLRVSAPMAFGLRHISPLLPIFLHRYP-EV 121 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 ++ + + R + + G AV I S + +L + ++ + ++ Sbjct: 122 SVDLLMDDRVVDLVGEG-FDLAVRIGQLPDSSLIARRLAPCFSVLCAAPDYLQR-TDVPQ 179 Query: 182 TRSALLKAPVVAF-DHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 AL + + + +F + + + N+SEA G C + Sbjct: 180 HIDALKHHNCLFYLYFKGGVEWSFEGPDGPVRFQPHGNYRANNSEALFDALLAGVGICQV 239 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 P + L+ G L+++ P + + PE R + +D+ + L + Sbjct: 240 PKFIVGPALSEGRLVEVLPQYRLPEHSIYAVY-PERRHLPAKVRVFIDFLSQHLGE 294 >UniRef50_B2T5C1 Transcriptional regulator, LysR family n=50 Tax=Proteobacteria RepID=B2T5C1_BURPP Length = 323 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 58/292 (19%), Positives = 110/292 (37%), Gaps = 11/292 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 + P L+A +A R F AA+++ +TQ AV+Q+++ LE++ G L R T Sbjct: 9 RLPPLNALRAFEAAARHLNFRVAAEEIGVTQGAVAQQVRNLEDVLGHQLFDRVPRGLALT 68 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G + +++ + ++ L+++ + WL+P LA P Sbjct: 69 ANGSIYFSSVQRALTIIANATEALAHRASS--LTVSTTPSFASKWLIPRLATFTDAHPS- 125 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQAL-PSCLVDKLGALDYLFVSSKPFAEKYFPN 179 + ++V + + G V A+ D L +D V S A+ P Sbjct: 126 IEVRVIADQQLSTFKGDG-VDIAIRHGKPPFGKGLAADPLFPVDIYAVCSPSLADARRP- 183 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQN-FDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 S L + ++ H ++ FL+ + + S + A G Sbjct: 184 LKKPSDLKRHVLLHDSH--NLWPEFLEALNEGGHVDASKGPRFSQSALAIDAAISGQGIA 241 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG 290 + +E++LA+G L L + Y+ PE R + A+ D+ Sbjct: 242 LTSEQLVERDLAAGRLCRLFDFALHLSLGYY-VVYPEDRRDSETIRAMRDWL 292 >UniRef50_B9Z6G4 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z6G4_9NEIS Length = 290 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 105/291 (36%), Gaps = 7/291 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 K P L+ +AV R + F +AA+ L +TQSAVS +I++LE FG PLLVR T Sbjct: 3 KLPPLNALRIFEAVARLQSFTKAAEALYLTQSAVSHQIRKLEEHFGFPLLVRGQRGIDLT 62 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 +G L + L ++ + + WL+P L P Sbjct: 63 PEGAILQHSVHDALLQIDQTCDQLSQRHHA--IRIKSPPSIAVRWLVPHLQAFKQQFP-D 119 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L++ V + G A+ P V+ L + V++ + Sbjct: 120 LDISVSTVWEEKPAFDWGLFDLAIQYGIGDWPGVTVELLHREQLIPVAAPALLQ--GRQT 177 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 +T L ++ + +L P + ++ V+ AR G +I Sbjct: 178 LTPDDLATQTLIHSTRDRHDWRLWLGLPAGEWPKGQKELLFDADVMAVEAARCGLGVALI 237 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGH 291 ++ L G L+ Q Y+ P R R++ L+++ Sbjct: 238 DPFLVQDALDDGSLLTPLQRTVQTGKAYYLVRPPHDRHSRRL-QPLVEWLQ 287 >UniRef50_C5AEG0 Transcriptional regulator, LysR family protein n=4 Tax=Betaproteobacteria RepID=C5AEG0_BURGB Length = 292 Score = 264 bits (675), Expect = 3e-69, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 101/295 (34%), Gaps = 9/295 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRPTE 61 P + L+A +A R F A +L +T A+S+++ LE G+P+ R R TE Sbjct: 5 LPPFPALRAFEAAARHESFSAAGDELHVTHGAISRQVAALEAWLGRPVFQRHGKRVRLTE 64 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G++ LA + + + +L + + WLLP L+ D P + Sbjct: 65 DGRRYLASVSAAFEQIATATARMRDTAPEHVLRINAQSTIAMKWLLPRLSRFQRDMP-NV 123 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 L++ + ++L G+ A+ P+ L V S ++ Sbjct: 124 ELKLSTSSAPLDQL-DGQFDVAIRSGPGHWPNRATGHFLDETLLPVCSPALLKRM--PIA 180 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 L + ++ D + + P + + +Q A G + P Sbjct: 181 QADDLSRHVLLHSDTRPTAWRDWFAAAG-TPLRARKKQSFDHFYLALQAAVDGLGVALGP 239 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 I+ ELA G L+ G YW + V + R+ Sbjct: 240 LPLIDDELAGGRLVLPLDGPRIASRRYW--WIAAREAAPPVVQ-FCAWLDAQARR 291 >UniRef50_Q391C1 Transcriptional regulator, LysR family n=5 Tax=Burkholderia RepID=Q391C1_BURS3 Length = 312 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 62/298 (20%), Positives = 109/298 (36%), Gaps = 11/298 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P L+A + R F RAA+ L +TQSAVS++++QLE G+ LL R T Sbjct: 1 MPALNALKAFEMAGRTGSFTRAAELLNVTQSAVSRQVRQLEGQLGETLLERRHHQLELTA 60 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G+ LL L+Q E + Q + L V A WL+P L + P Sbjct: 61 AGRVLLRALQQSFDKIELTVRSLQEKTHLNRLRANVPPTFAARWLMPRLGRLRDAHP--- 117 Query: 122 NLQVEDETRTQERLRRGEV-VGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 ++ TR + L V A+ L ++ V + + +G Sbjct: 118 EFELSLTTRIHDSLGESRVLDCAIRFGDGEWDGFDNALLMQEQHIAVCAPALYARLRQDG 177 Query: 181 VTRSALLKAPVVA----FDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 L + ++ D Q +L+ + + + + ++ A G Sbjct: 178 A-PIDLNRFTLLHVLATDDQRYLTWQHWLKAAGIADVDTRGGYEFDLLDHAIRAAIDGLG 236 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 + + +ELA+G+L+ + YW PE + + D+ + + Sbjct: 237 ITIADRHMVARELATGQLMQVLNVHVDGHQSYWFVTRPEQTNLPHIVQ-FRDWLQQEV 293 >UniRef50_Q125E9 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q125E9_POLSJ Length = 296 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 56/302 (18%), Positives = 99/302 (32%), Gaps = 12/302 (3%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-P 57 M+R P + L A +A F A Q L ++QSAVS +I LE L +R Sbjct: 1 MRRKIPSTQALLAFEAAAHRGSFTLAGQDLSVSQSAVSHQILGLEQDLDVSLFLRLPRQL 60 Query: 58 RPTEQGQKLLALLRQVELLEEEWLGDEQTG-STPLLLSLAVNADSLATWLLPALAPVLAD 116 T+ G+ LL+ + E + D + L L V WL+P + L Sbjct: 61 VLTDAGRSLLSRVSPALDALEAAMLDLASSKGEGGTLELGVVPTFATKWLIPRMPTFLKA 120 Query: 117 SPIRLNLQVEDETRTQE-RLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEK 175 P ++ + TR + A+ P + L + + V S +K Sbjct: 121 HP---HVTLNLSTRLLPFDFSLTGLDAAIHYGRPDWPGTESEYLMGEESVVVCSPALMKK 177 Query: 176 YFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPG-SVPCHIVNSSEAFVQLARQG 234 + +LK ++ + +LQ + Q + G Sbjct: 178 R--QLRRPADVLKFTLIHQSTRPHAWRDWLQLAGIDDAQGASTGPKYELFSMIAQAVKAG 235 Query: 235 TTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 ++P + E+A G L Y+ + + R + L ++ + Sbjct: 236 LGVAVLPRFLVADEIADGTLAVPFDLSLSSDFAYYLVWPTQKASWRPLLQ-LREWLREQA 294 Query: 295 RQ 296 Sbjct: 295 AP 296 >UniRef50_A3SJ26 Transcriptional regulator, LysR family protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SJ26_9RHOB Length = 295 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 108/294 (36%), Gaps = 10/294 (3%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQGQ 64 L + +AV R F AA +LC+TQSAVS++I+ LE G+ L +R T++G+ Sbjct: 1 MSQLHSFEAVARRMSFTAAADELCLTQSAVSRQIRALEEDLGRALFLRKHRAIELTQEGR 60 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQ 124 L + + + + S +++A + L+P L P ++L+ Sbjct: 61 DLFEAVTRGLDEIALAVNGLRRASDTPQITVATSVAFSYYCLMPRLERFADRYP-EIDLR 119 Query: 125 VEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRS 184 + + + L + + AV P +L V S + + + P S Sbjct: 120 ILATDQLVD-LGKDDADVAVLFGDGNWPGVEARRLFGERVYPVCSAGYLQNH-PELRRPS 177 Query: 185 ALLKAPVVAFDHLDD-----MHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 LL ++ D A+L Q +NS +Q A G + Sbjct: 178 DLLDQTLLHLDGGGTIWGAVDWHAWLVQQGVTGQPVRRGIRLNSYPMVLQGAEAGRGVAL 237 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 + LASG+L+ L Y+ A +R A L + + Sbjct: 238 GWSYITDAMLASGQLVCLFDTPLVTSCSYY-IGASSARAADPAVAAFLQWMVEE 290 >UniRef50_C3K1T6 Putative LysR-family transcriptional regulator n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K1T6_PSEFS Length = 348 Score = 262 bits (672), Expect = 8e-69, Method: Composition-based stats. Identities = 58/292 (19%), Positives = 107/292 (36%), Gaps = 11/292 (3%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQ 62 P LQ +A R F RAA++L +TQSAVS+++ QLE M L R + Sbjct: 59 PSMTALQCFEAAARHLSFTRAAEELHLTQSAVSKQVAQLEEMLCHNLFERVRQRLYLSPA 118 Query: 63 GQKLLALLRQVELLEEEWLG-DEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G LA + ++ + G +L +A WL+P L A P + Sbjct: 119 GSLYLAEVHKILTQVDISSRYILTYGGETEVLRIATQPTFGDRWLVPKLKDFAAKHP-NI 177 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +L V +E + L+ + A + P +L + V + F P G Sbjct: 178 HLDVRNELEPFDVLQA-KADIAFFFGQGSWPGATCIELFREAVVPVCAPGFV----PEGS 232 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 S + ++ + + + S ++ ++ A+ G ++P Sbjct: 233 DAS--SRHTLLQCTSRPEAWHEWFLEQGLHSQNSYHGPRFDTFYMCIRAAQSGYGVALVP 290 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 + +ELA G L+ ++ A + + +A L++ + Sbjct: 291 QYLVAEELAQGSLMIPWDYAMPSSGAHFIAHAEHAGEI-PKVNAFLNWMVEY 341 >UniRef50_B8INN0 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=B8INN0_METNO Length = 305 Score = 262 bits (672), Expect = 8e-69, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 101/296 (34%), Gaps = 5/296 (1%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPT 60 + P L+A +A R + RAA++L +T AVS+ ++ LE G L R T Sbjct: 3 RLPPLNPLRAFEAAGRLQSIRRAAEELSVTPGAVSRHVQSLEMFLGVRLFRRHAREIVLT 62 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 +G++ LA + + E +L + WL+P L+ A + Sbjct: 63 AEGEQYLAKVSEHLDGIREATRALTGRRGKDILRIRAYTTFAMKWLIPRLSSFHAGN-QT 121 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 +++ T + R + GA+ + P +D+L + + + + + ++ Sbjct: 122 TEVRLTTSNETVD-FDRENLDGAIRLGDGRWPGVELDRLMPNELVPLCTPEYGRRHG--L 178 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 L ++ D Q +L+ SS Q +G + Sbjct: 179 QNPEDLQGTLLLHSLVRSDDWQYWLKAAGVSGIDPYSGDKYASSTLAYQATLEGHGIMIA 238 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 +L +G L+ P R ++ P ++ + + Sbjct: 239 QKALFLDDLRAGRLVQPIPFSLDRGAFTYYLIYPRRSSRNPAFRRFREWLLDEVER 294 >UniRef50_A4F096 Transcriptional regulator, LysR family protein n=3 Tax=Rhodobacterales RepID=A4F096_9RHOB Length = 302 Score = 262 bits (672), Expect = 8e-69, Method: Composition-based stats. Identities = 60/297 (20%), Positives = 99/297 (33%), Gaps = 8/297 (2%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRP 59 M+ P L+ +A R + F A ++L +TQSAVS++IK+LE G L R Sbjct: 1 MRLPSLTHLRCFEAAARHQSFTSAGEELGLTQSAVSKKIKELETDLGFDLFQRVGRGVVL 60 Query: 60 TEQGQKLLALLRQVELLEEEWLG-DEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 T GQ L A L Q L G+ L +AV WL+P L P Sbjct: 61 TSAGQGLAADLAQNLGALRNSLQKAVAAGAGKSALRIAVLPTFANRWLIPRLPDFFDQHP 120 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 + L + + R A+ P + L + +++ F E++ Sbjct: 121 -EIELNLLTRLEPFD-FTRDPFDLAIHYGFDNWPGAQMSPLFGEQMVPIAAPAFLERHG- 177 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 L P++ D D + + + + G Sbjct: 178 -LTDPGGLPHVPLLHLDSRSDAWGDWFKSAGISRQMRQDGRYFDQYSMVIAATIAGLGAA 236 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 ++P + +EL +G L+ + Y+ P + K LR Sbjct: 237 IVPIDMVAQELEAGILVQMQGPALVSNKRYF-LVRPHGVASEPAQQ-FELWLRKQLR 291 >UniRef50_Q4ZLD0 Regulatory protein, LysR:LysR, substrate-binding n=7 Tax=Proteobacteria RepID=Q4ZLD0_PSEU2 Length = 328 Score = 262 bits (672), Expect = 9e-69, Method: Composition-based stats. Identities = 57/301 (18%), Positives = 96/301 (31%), Gaps = 10/301 (3%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR 58 M+R P L + +A R F +AA +L +TQ AV ++I LE G L R+ Sbjct: 25 MRRKIPSTTALVSFEAAARHESFTKAANELSLTQGAVCRQIGGLEEFLGVELFRRSRRGV 84 Query: 59 -PTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 TE G + Q E + LAV WLLP L Sbjct: 85 KLTEAGLSYSRRVSQQLDAVERDTLSVMGQQGANAIELAVVPTFGTQWLLPRLKDFQHKH 144 Query: 118 PIRLNLQVEDETRTQE-RLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY 176 P ++ V RT+ + A+ +L + + V S F E Sbjct: 145 P---DVTVHLTNRTRPFLFADTDFDAAIYFGDADWSGTQSHRLMGENSMPVCSPSFLE-- 199 Query: 177 FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 + + L + P++ + + + Q A Sbjct: 200 GRDSLGARELAELPLLQQTTRPYAWRQWFHAQDLDVARDMTGPRYELFSMLAQAAMHDMG 259 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRML-YWHRFAPESRMMRKVTDALLDYGHKVLR 295 +IP I++EL L+ ++ PE ++ A D+ + + Sbjct: 260 IALIPPFLIQRELQERRLVIANTRALPGSSSKAYYLMIPERKVESASLTAFRDWLIEQAQ 319 Query: 296 Q 296 + Sbjct: 320 R 320 >UniRef50_D1UM82 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UM82_9BURK Length = 301 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 52/296 (17%), Positives = 95/296 (32%), Gaps = 8/296 (2%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQ 62 P L +AV R AA ++C+T SAVS+++ LEN G L R T+ Sbjct: 6 PPLNPLHVFEAVARLGSLTSAAAEMCVTHSAVSRQLATLENYLGVSLFDRGPRGVKLTKV 65 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 G + L L+V A WL+ L P + Sbjct: 66 GATYYKQIGPAFASIVSATETIVGRMEGEPLRLSVYTTFAAKWLMHRLHRFEQAHP-NIP 124 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 +++ +V A+ P ++L V S K P + Sbjct: 125 VELSTTVAKIN-FSEVQVDAAIQFGDGNWPGINCERLFDDVIEPVCSPQVL-KNGPPLES 182 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPG---SVPCHIVNSSEAFVQLARQGTTCCM 239 L ++ + + +L+ S +S Q A +G + Sbjct: 183 IDDLANHRLLQSRYRRNDWFDWLRAVGRSDLEGLVSRQRGGFQNSLLAYQAAIEGMGVVI 242 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 + ++A+G L+ R + Y+ P++R + +A + ++ Sbjct: 243 GQTRLLANDIAAGVLVRPFDRPVTRELAYYLLV-PDNRRHSRKVEAFRVWLRSEIQ 297 >UniRef50_Q2W945 Transcriptional regulator n=2 Tax=Magnetospirillum RepID=Q2W945_MAGSA Length = 296 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 66/298 (22%), Positives = 110/298 (36%), Gaps = 13/298 (4%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTE 61 + P R L A +A R F RAA++L +T +A+SQ+IKQLE++ G L R T Sbjct: 4 RLPPLRALHAFEAAARHLSFARAAEELGVTPAAISQQIKQLEDILGVGLFHRGTRLSLTR 63 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 + + +G L ++ A WL+P L P + Sbjct: 64 AAALVSGEVSDAFDRLASAVGRLAPDGPARPLVVSAPPAFAARWLVPRLTRFQDAHP-GI 122 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +L + R + R G V A+ P LV++L + + V++ A Sbjct: 123 DLHLSATLRLVDLDREG-VDLAIRYGPGRYPGLLVERLRLEEVVAVATPRLAAGLGE--- 178 Query: 182 TRSALLKAPVVA-----FDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 S L +A ++ +D A+L + P ++ + ++ A G Sbjct: 179 -VSDLARATLLVNEGIGWDPSFPTWPAWLSEMGASPAETLRLRPFGDASLVLEAALAGLG 237 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 ++ + ELA G L+ L PG +H R A D+ L Sbjct: 238 VALVWRTLVCDELAGGRLVALFPGRPLASA--YHLACLPERAEFPPIRAFRDWIKAEL 293 >UniRef50_B1G1M3 Transcriptional regulator, LysR family n=1 Tax=Burkholderia graminis C4D1M RepID=B1G1M3_9BURK Length = 321 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 60/303 (19%), Positives = 108/303 (35%), Gaps = 9/303 (2%) Query: 1 MK--RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP- 57 M+ P ++L A +A R F RAAQ+L +TQ+A+S +IK LE+ L VR Sbjct: 1 MRPYIPSLQSLLAFEAASRHLSFTRAAQELELTQTAISHQIKTLEDRLEVKLFVRRRNVL 60 Query: 58 RPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 T ++ L + + L + +L++ L+PAL Sbjct: 61 TLTPAAREYLDSVHEAINLLSIATAHARKKKPSTVLTVTCLPTYAVKCLIPALPEFQRAH 120 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 P + + V + T R A+ S D+L ++ V S E+ Sbjct: 121 P-DITVHVATSS-TFNEFDRNSYDVAIRYGSGRWASARSDRLHGEEFFPVCSPAVLEEAG 178 Query: 178 PNGVTRSALLKAPVVA---FDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQG 234 G L + + + D A+L+ P + + + A G Sbjct: 179 KFGSVAEVLARMRQIRTYFYSMYQDDWPAWLEAAVHEPVEFAGESVFHLQLTSLAAAVDG 238 Query: 235 TTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 + + +LASG+L+ Y+ +P + K +A ++ L Sbjct: 239 VGIAIGRTPLVNGDLASGKLVAPFDVRVPSNSAYF-VSSPTDKARTKKVEAFREWALARL 297 Query: 295 RQD 297 ++ Sbjct: 298 GEN 300 >UniRef50_A5V722 Transcriptional regulator, LysR family n=22 Tax=Proteobacteria RepID=A5V722_SPHWW Length = 326 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 63/296 (21%), Positives = 111/296 (37%), Gaps = 7/296 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRPTE 61 P L A DA R + F AA++L +TQSAVS++I+ LE + G L R + T Sbjct: 34 LPPTALLCAFDAAARHQSFTAAARELALTQSAVSRQIRALEELLGSELFHREKQKVKLTL 93 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G +R + L LA+ WL+P L LA P + Sbjct: 94 AGNAYAREIRGALARISSATLGFRANPGGASLHLALLPMFGLRWLMPRLPGFLAAHP-DI 152 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 + V T + R + A+ +D+L + S + Sbjct: 153 TVHVSTRTTPFD-FRTETIDAAIHFGEGEWAGAQLDRLMGETVAPLCSPALRARLGAA-- 209 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 + L++AP++ D + + ++ PG V +++ + AR G ++P Sbjct: 210 KPADLIEAPLLHLMSRPDAWERWFAAM-EVDPGEVHGMLLDQFLLVAEAARAGLGVALLP 268 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 +E EL SG+L+ + Y+ + + DA + + R++ Sbjct: 269 EFLVEAELRSGDLVRALDAPVVQADHYYLVWPHTHERHPPL-DAFRTWILQEARKE 323 >UniRef50_C4LCQ0 Transcriptional regulator, LysR family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LCQ0_TOLAT Length = 300 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 106/296 (35%), Gaps = 11/296 (3%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQGQ 64 L + R F+ AA +LC+T SA+S RI+QLE G L +R TE G Sbjct: 7 LTLLSTFEVAARYLSFKLAADELCLTPSAISHRIQQLEKQLGFRLFLRMTRKLVLTEDGN 66 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQ 124 +LL L + ++ + D + L+L + WL+P L P LN+ Sbjct: 67 RLLRTLTKSLRRIDDEIEDIRYNDLRGTLTLGIAPILGQLWLMPRLPDFQQRWPS-LNVM 125 Query: 125 VEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRS 184 + T + A+ P + L L V S +A + Sbjct: 126 LRVRAGTVN-FDEEHIDLAIYYGATHYPDLYRELLFEEQLLPVCSPAYAAQLG-LSENPD 183 Query: 185 ALLKAPVVAFDHLDDM------HQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 L +A + D+ + + + + P + N+ +Q A G Sbjct: 184 RLSEACFLHASESTDVQNLFSEWRIWCEASNISLPLEERYYGFNNYTLALQAALNGMGIL 243 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 M ++ I+ L SG+L+ G + F PE R A D+ + + Sbjct: 244 MGRYILIKPMLESGQLVSPC-GPMIPAGRNYELFYPEENAQRPRLKAFTDWMKEQI 298 >UniRef50_D0U593 DddR n=1 Tax=Pseudomonas sp. J465 RepID=D0U593_9PSED Length = 308 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 95/293 (32%), Gaps = 6/293 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 + P L+A +A R F +AA +L +TQ+A+SQ++K LE+ G L R T Sbjct: 4 RLPPLNWLRAFEASARHLNFTQAAAELSLTQAAISQQVKGLESQLGTNLFKRLPRGLELT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 E GQ + ++ + +++ N TWL P L A P Sbjct: 64 EAGQAYMPVIHDSIERLAAATDELFGQGRRRPITVRANLVFFTTWLAPRLGRFRAAHP-- 121 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + + + R E + +L + V S P Sbjct: 122 -EVGLHFTSNIWLDERSKEASMEIRYGKGNWAGLRSVQLTHDELFPVCSPRLLSGELP-P 179 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + L ++ ++ +L + + ++ +++A +G + Sbjct: 180 ASPGELSADSMLHVIGYEEGWGYWLNKTGFQHVDASQGMQFDTLITALEMAVRGHGMALG 239 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 + + LA G LI + H P + + + + Sbjct: 240 RTSLVAEMLADGRLIAPFSQRVPASEAF-HLSCPSHMQLSPHGETFWSWLVEE 291 >UniRef50_Q13Q04 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13Q04_BURXL Length = 312 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 58/300 (19%), Positives = 110/300 (36%), Gaps = 9/300 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRPT 60 + P L+A ++ R + RAA++LC+T SA+S+ + +LE+ L R T Sbjct: 5 RLPSLNALRAFESAARNQSMTRAAEELCVTHSAISRHVAKLEDYLNAKLFERGHQQVVLT 64 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGST-PLLLSLAVNADSLATWLLPALAPVLADSPI 119 ++G + L+ + ++ + L + V + +L+P LA P Sbjct: 65 KRGAAYASRLQVLFDQIQDVTAEYFYARPDNASLRIGVLSTFAMRFLIPRLARFKKLYP- 123 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 + LQVE R EV A+ + P + + L + + V S + Sbjct: 124 EITLQVE-SAHEHVSPRDEEVDVAIWFGNGDWPGLVSEHLFHEELVPVGSPTLLAGH--E 180 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 L ++ D Q +L + S Q A G M Sbjct: 181 LGNPDDLESFLLLHAAARHDDWQRWLSATGATRVDGYKGLKLEYSGLAYQGAVDGLGLAM 240 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRF---APESRMMRKVTDALLDYGHKVLRQ 296 L ++++LA+ L+ P + Y+ E ++ + ++ L D K + + Sbjct: 241 AQTLFVQEDLANRRLVAALPQRVKTGRSYYLVHNEMKSEQPVILRFSEWLKDEVRKTIEE 300 >UniRef50_C5AJX7 Transcriptional regulator, LysR family protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5AJX7_BURGB Length = 315 Score = 260 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 110/295 (37%), Gaps = 7/295 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P R L+ +V R R + AA+++ +T SA+SQ+I +LE G LL R+ T Sbjct: 12 LPSLRALRYFVSVGRHRSIKIAAEEIHVTPSAISQQIVKLEEELGVSLLQRSPRGIDITP 71 Query: 62 QGQKLLALLRQVELLEEEWLGDEQT-GSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G + L L+QV L ++ + +++++ WL+P L+ LA Sbjct: 72 HGSRYLQELQQVFDLILRATDRLRSNANHTDIVTVSCAHSFAMQWLVPRLSD-LAQYAPS 130 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 ++L++ R + ++ + P + L + S E+ P Sbjct: 131 VDLRISTTNRYAAFI-DDQIDFGLRHGTGRYPGLKSELLLDDPLYPICSPRLVERLGPF- 188 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + L + ++ + + +L+ + + S +Q A + Sbjct: 189 ASYQDLARTTLLHDERHKE-WLGWLRHHGVEGVRGDKGAVFIDSNGMLQAAVACHGVALA 247 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 + ELA G L L F Y+ + PE + ++ + ++ Sbjct: 248 RRSIVASELADGRLTVLFDAPFTPDYAYYLVY-PEQTLDNPSARVFREWLMQAVK 301 >UniRef50_C7RIQ1 Transcriptional regulator, LysR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RIQ1_9PROT Length = 312 Score = 260 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 102/295 (34%), Gaps = 8/295 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 + P +L+ A +AA +L +T AVS +++QL++ G L R+ T Sbjct: 6 RSPPLGSLRVFVAAADSESVTKAAAQLHLTHGAVSHQLRQLQDYLGVALFERSGRGLKLT 65 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 QG + + + L + A WLLP L ++ Sbjct: 66 TQGAAYAERVSRALAEIGKATEQLIAARDYRRLRVTCMPSFAARWLLPRLGSFISCH-RE 124 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L+++V+ R + ++ GE A+ H P L Y V S F ++ Sbjct: 125 LDVEVQSSARLAD-IKGGEADVALRFGHGRYPGLSCRLLMKDWYYPVCSPEFIARH--AL 181 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 V+ + L P++ + D++ Q + + + + S + A G + Sbjct: 182 VSPAQLTGLPLLRSN--DELWQPWFGAAGVVVEEPQRGAVFDDSSLMLMAAASGQGVALA 239 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 H +LASG L + Y+ V A ++ + Sbjct: 240 RHTLAVDDLASGRLRRPFAMAIESPFSYFFVCRLADEQHAAVV-AFREWLFQEAA 293 >UniRef50_B1Y350 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=B1Y350_LEPCP Length = 300 Score = 260 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 108/299 (36%), Positives = 159/299 (53%), Gaps = 5/299 (1%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 D + L+AL AV+RE FERAA+++ +T SAVSQRI+ LE G LLVRT P TE+ Sbjct: 2 MLDLQALRALAAVLREGSFERAARQMHVTPSAVSQRIRALEERLGCVLLVRTSPVTATEE 61 Query: 63 GQKLLALLRQVELLEEEWLGDEQ-----TGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 G +L Q+E+LE + D Q + +AVNADSLATW++PALA A S Sbjct: 62 GARLYLHFLQIEVLEADLARDLQPLGDAASRRGRSIRVAVNADSLATWVIPALADFHARS 121 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 + L V+D+ T+E LR G V AV+ + + C VD LG++ Y +S FA++YF Sbjct: 122 GDTVALHVDDQDHTREWLRSGTVFAAVTAASEPVAGCRVDPLGSMRYCAAASPEFAKRYF 181 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 ++A +AP++ F+ D + FL + P + S+ AF+ AR G Sbjct: 182 EARDLQAAFSEAPMLVFNQKDQLQHRFLNELLGDADPHPPVWWLPSTHAFLDAARAGLGW 241 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 + P + +LASG L+DL+PG L+W + +S + + +L L Q Sbjct: 242 GLHPLPLVADDLASGRLVDLSPGHSLDVPLFWQSWRLDSETVHTLRSCMLRAAEGALLQ 300 >UniRef50_B8FDR1 Transcriptional regulator, ArgP, LysR family n=2 Tax=Desulfobacteraceae RepID=B8FDR1_DESAA Length = 298 Score = 259 bits (663), Expect = 8e-68, Method: Composition-based stats. Identities = 112/296 (37%), Positives = 167/296 (56%), Gaps = 2/296 (0%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 DY+ L+AL AV++E GFE+AA +L ITQSAVSQR+K LE+ GQ L+VRT PPR T Sbjct: 1 MLDYKLLEALAAVVQEGGFEKAAARLHITQSAVSQRVKLLEDQAGQVLMVRTSPPRATPA 60 Query: 63 GQKLLALLRQVELLEEEWLG--DEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G++++ QV LEE+ D L+L +N DSL+TW LPA+ L + Sbjct: 61 GRQMIKHYLQVNRLEEDLKESLDLTGQDVFTTLALGINGDSLSTWFLPAVRDFLIRERLL 120 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L+L+ +D+ T + LR GEV+G +S+Q + + CL++ LG +DY ++S +A K+FP G Sbjct: 121 LDLRGDDQDETHKMLRDGEVIGCISVQDRPMQGCLMEYLGRMDYRLIASPEYAAKWFPEG 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + + KAP F+ D +H P +P H + SSE FV G M+ Sbjct: 181 MNLESASKAPFFIFNRKDHLHYKMFPLALGEVPTPLPAHYLPSSEQFVSFIEAGLGYGML 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 P Q ++ L +G L+DL P LYWH + S ++ + T L+ ++L+Q Sbjct: 241 PDQQSKELLEAGLLVDLAPSHIVPVHLYWHCWNLSSALLERFTRHLVRKARRILQQ 296 >UniRef50_B2TAX0 Transcriptional regulator, LysR family n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2TAX0_BURPP Length = 296 Score = 259 bits (663), Expect = 9e-68, Method: Composition-based stats. Identities = 50/298 (16%), Positives = 105/298 (35%), Gaps = 7/298 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPT 60 R +++QA +A R F AA++L +T SAVS +IK LE L R T Sbjct: 3 NRVTLKSIQAFEAAARLSSFALAAEELFVTPSAVSHQIKLLEEQLSIRLFHRLHRTVLLT 62 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 + G++ + + + + +L++ WL+P +A A Sbjct: 63 DSGRQYAEEISSAFARIDAATREIGRVAKSDILTIHCTPSFATQWLMPRIARFSAAH-TD 121 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQH--QALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 +++++ + + + G V + LV +L + + + +P Sbjct: 122 IDVRLNASSEAADLI-SGAVDIDIRYGPRKLQPAGTLVLELPPETIVPLCAPALMSGDYP 180 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 + + L P++ + + +++ + + S + A G C Sbjct: 181 -LRSVADLQHHPLIHSEGCLVGWRDWMRLHRKTRIDIGRGPRFDRSFMALSAAVDGLGVC 239 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 + L ++EL +G L+ Y +SR + D+ L + Sbjct: 240 LESLLLAQRELETGRLVAPFGTDGLDVHGYTLNL-LKSRADLPKLRSFQDWLFAELER 296 >UniRef50_A4Y0R1 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=A4Y0R1_PSEMY Length = 298 Score = 259 bits (663), Expect = 9e-68, Method: Composition-based stats. Identities = 57/293 (19%), Positives = 91/293 (31%), Gaps = 8/293 (2%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-P 57 M+R P L A ++ R + F +AA +L +TQSA+ ++I LE+ L R+ Sbjct: 1 MRRKIPSTAALVAFESAARHQSFTKAADELNLTQSAICRQIGGLESFLNVELFRRSRRGV 60 Query: 58 RPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 TE G + E + LAV WLLP L Sbjct: 61 VLTEAGVAYSRRVAAQLDAVERDTLALMGNQGTTSIELAVVPTFGTQWLLPRLRTFQQLH 120 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 P + + + + TR A+ L L V S Sbjct: 121 P-EVTVHLTNRTRPF-LFADTHFDAAIYYGDAEWSGTEAHFLMHEHLLPVCSPKLL---G 175 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 VT + P++ + + P + + Q AR Sbjct: 176 DEPVTAERIAALPLLQQTTRPYAWRQWFAAQGMSVPRDMTGPRLELFSMLAQAARHEMGV 235 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG 290 +IP I++EL G L+ ++ PE + A D+ Sbjct: 236 ALIPPFLIQRELDEGSLVIALNRAVPSHDHAYYLMVPERKTESAALKAFRDWL 288 >UniRef50_P70773 Chromosome initiation inhibitor n=6 Tax=Gammaproteobacteria RepID=ICIA_AERSA Length = 299 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 152/298 (51%), Positives = 197/298 (66%), Gaps = 2/298 (0%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 MK DY+ L ALDAV++E+ FERAAQ+L ITQSA+SQRIKQLE F +PLL+R+ P + T Sbjct: 1 MKALDYKLLLALDAVMQEQNFERAAQRLHITQSAISQRIKQLEQQFAEPLLIRSQPLQAT 60 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLS--LAVNADSLATWLLPALAPVLADSP 118 GQKLLA RQV LE E G+ + +AVNADSLATW LPALAP+L P Sbjct: 61 PLGQKLLAHYRQVRQLELELAGEIAPDEPQAPIRVSIAVNADSLATWFLPALAPLLEQHP 120 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 I LNL V+DE RT +R+R G+ GAVS+ Q L C VD+LG + YL +S F ++FP Sbjct: 121 IELNLLVDDECRTLDRVREGQAFGAVSLHGQPLAGCCVDELGEMRYLLTASPAFVARHFP 180 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 G+T +AL K P VAFD DDMH +F+ ++F L PG PCH V SSEAFV +A QG C Sbjct: 181 AGLTPAALAKTPAVAFDQRDDMHVSFMARHFGLEPGGYPCHTVRSSEAFVAMAEQGLAYC 240 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 +IP LQI ++LA G L+DL+P LYWHR+ E + ++++ L+ G + L+ Sbjct: 241 LIPELQIRQQLAQGILLDLSPSHHLIEPLYWHRWVLERGLHKQISQRLISEGRRALQP 298 >UniRef50_Q2S7E2 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7E2_HAHCH Length = 306 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 56/301 (18%), Positives = 103/301 (34%), Gaps = 11/301 (3%) Query: 1 MKR-PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPPR 58 M+ P ++ + R F +AA++LC+T AVS+ I LE PL + + Sbjct: 1 MRMLPPLNAVRTFECAARHLSFTKAAEELCVTPGAVSRAIAGLEERLQTPLFSQHKRRLQ 60 Query: 59 PTEQGQKLLALLRQVELLEEEWLGD-EQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 T G+ L + Q + Q LL++ + WL+P L Sbjct: 61 LTAAGRAYLFHVTQALDRLSLGTDELLQHRGEGGLLTIGALPTLGSRWLIPKLQDFQLRY 120 Query: 118 P-IRLNLQVEDETRTQE----RLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPF 172 P I + ++ ++ L + A+ I KL L V++ Sbjct: 121 PNISVEVKTTPSDFSKAFTELDLNEHGLDVALYIGQGDWSGVRRHKLFPERLLPVAAPSL 180 Query: 173 AEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLAR 232 E+ + + ++ F Q FD + ++ A Sbjct: 181 REELEALARGEADPGRL-LLHSTRPHVWAHWFNAQGFDFTTPTWRA-RFEHYYMVIEAAV 238 Query: 233 QGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHK 292 G ++P + + +EL SG L+ L+ + Y+ P +R A D+ + Sbjct: 239 HGLGVALLPEVLVAQELRSGALLALSQRGLPQPENYYLLHHP-ARSEENKIRAFRDWLMR 297 Query: 293 V 293 Sbjct: 298 T 298 >UniRef50_D1RRX4 Transcriptional regulatory protein n=2 Tax=Enterobacteriaceae RepID=D1RRX4_SEROD Length = 329 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 53/292 (18%), Positives = 104/292 (35%), Gaps = 9/292 (3%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQ 62 P R ++A +A+ R AA++L I+ SAVS ++K LE PL R + Sbjct: 41 PPLRAVRAFEAIARLGSITAAAKELAISPSAVSHQLKTLEAFLQMPLTERQGRNLILRSE 100 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 G++ +R + + + S +++++ W +P L L ++P ++ Sbjct: 101 GREYYRSIRSAFNVLRQATEHVREQSASRQVTISLIPLFGMGWFIPRLHGFLRENP-DID 159 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 + V ++ +KL + + V S+ F + T Sbjct: 160 INVVYANHRNYL--SDAADISIRFGVGQWTGYRSEKLMSGKMVPVCSRSFI-RLHGLLDT 216 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 L P++ + + + QQ P + + + G C ++ Sbjct: 217 PDQLSPLPLLHDEER-NTWMQWFQQAGVRRPLRSTGPMFEDGLLTLAAVQSGLGCALMRE 275 Query: 243 LQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRK---VTDALLDYGH 291 IE L SGEL+ L Y+ +S + ++ + LL Sbjct: 276 PLIEPYLNSGELVKLFDRPIDDGRDYYLCVRADSELSQEGQNLQQWLLREAA 327 >UniRef50_Q7MF37 Transcriptional regulator n=8 Tax=Vibrio RepID=Q7MF37_VIBVY Length = 292 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 95/289 (32%), Gaps = 6/289 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRPT 60 P L+A +A R + F +AA++L +T++AVSQ++K LE+ L R T Sbjct: 3 SLPPLNALKAFEAAARLQSFTKAAEELNVTRAAVSQQVKALESQLEAVLFERHGAQLVLT 62 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 E + L ++ + L L V WLLP L P + Sbjct: 63 EAARDYLPVVSNLFQQLAVTTEQLFNRRQNGQLVLHVAHSFCLQWLLPRLGDFRRRYP-Q 121 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L++ + T + + V KL +++ V+S F + Sbjct: 122 WPLKISTTSNTLPD-NSATADVEIINGYGDWQYHQVTKLTEENWILVASPGFLQ--LNPI 178 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + L P +A + + + + S ++ A ++ Sbjct: 179 ASLDDLKNVPRLATSGYVETWPRWFAYHEVSVACGKMALEFDHSTLSIEAAVHQLGVLLV 238 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFA-PESRMMRKVTDALLD 288 L ++ L G L+ + + P+ + L D Sbjct: 239 RDLLVDDHLRQGSLVQVGEWSMPSVGAHHLIVRNPDKPQVDAFVHWLTD 287 >UniRef50_B6R905 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R905_9RHOB Length = 306 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 107/296 (36%), Gaps = 8/296 (2%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQGQ 64 L V+ +GF AA++L +++SAVS+RI LE G LL R+ TE G+ Sbjct: 4 ISALPVFVMVVEHQGFAAAARELGVSKSAVSKRITLLEEHLGARLLNRSTRNISLTEAGE 63 Query: 65 KLLALLRQVELLEEEWLGDEQ--TGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 A +E G L + V + P + L +P ++ Sbjct: 64 LYYARAVDALEAAKEAESAVAQMQGKPKGRLKINVPMTFGRLHIAPLIPKFLKLNP-EIS 122 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 + + + RT + + G A+ S + K+ + +S + E++ T Sbjct: 123 IDMIMDDRTIDLV-DGGFDLAIRGGRLKDSSLIARKITPCFNVLAASPQYLEEHGT-PAT 180 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQ-NFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 L + + + D H+ L+ + + + VN+ +A G + Sbjct: 181 PQDLQNHNCLHYAYFSDQHEWTLEDPQGQVRVETSGNYQVNNGDALTTAVLGGCGIGRLT 240 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 + L SG L + P + + P + + T +++ + + D Sbjct: 241 TFAAGEYLRSGALTQVLPNYTLPTQTMYAVY-PNRKYLPTKTRVFINFISEQIGSD 295 >UniRef50_A8GEV9 Transcriptional regulator, LysR family n=22 Tax=Proteobacteria RepID=A8GEV9_SERP5 Length = 328 Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 100/291 (34%), Gaps = 9/291 (3%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQ 62 P R ++A +A+ R AA++L I+ SAVS ++K LE PL R + Sbjct: 41 PPLRAVRAFEAIARLGSITAAAKELAISPSAVSHQLKTLEAFLQMPLTERQGRNLILRNE 100 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 G+ +R + + + S +++++ W +P L L ++P ++ Sbjct: 101 GRDYYRSIRSAFNVLRQATEQVREQSASRQVTISLIPLFGMGWFIPRLHGFLRENP-DID 159 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 + V ++ +KL + + V S+ F + + T Sbjct: 160 INVVYANHRNYL--SDAADISIRFGTGQWSGYHSEKLMSGKMVPVCSRGFIKVHG-LLDT 216 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 L P++ + + Q P + + + G C ++ Sbjct: 217 PDQLSPLPLLHDEERT-TWMQWFQLAGVRRPLRSTGPMFEDGLLTLAAVQAGLGCALMRE 275 Query: 243 LQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRK---VTDALLDYG 290 I L+SGEL+ L Y+ + + + + LL Sbjct: 276 PLIAPYLSSGELVKLFDLAIDDGRDYYLCVRQNTELSPEGLNLQRWLLKEA 326 >UniRef50_A6W2C5 Transcriptional regulator, LysR family n=3 Tax=Gammaproteobacteria RepID=A6W2C5_MARMS Length = 314 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 64/300 (21%), Positives = 102/300 (34%), Gaps = 12/300 (4%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRP 59 MK L R F +AAQ+L +TQ AVSQ+I+QLE L VR Sbjct: 1 MKSVPLAGLGTFAIAARHLSFTKAAQELHLTQGAVSQQIRQLEERLKLTLFVRYHRRLEL 60 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 T G +L L + + + Q T +L+++V WL+P L + P Sbjct: 61 TVAGVRLAVQLNHSFTEINDLVLELQEEETSNILTVSVMPSFATKWLIPRLGSLQEAYP- 119 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 L L+++ R +R + A+ H + L V S FAE+ Sbjct: 120 DLQLRIQANDREVN-FQRDRIDVAIVHSHVHSSKGHIVPLMKDKVFPVCSPAFAEQR--A 176 Query: 180 GVTRSALLKAPVV------AFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQ 233 S L + P++ F + +L N + VQ A Sbjct: 177 LTEASQLAQVPLLNDDSEWRFSSPYAEWEKWLLLANAKGIKPSRGISFNRGDLAVQAAVA 236 Query: 234 GTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 G + + ++ G L+ + PE + R+ LL + Sbjct: 237 GQGVALGRTPLVMDDIQQGRLMMPFSE-TLDEGHAYLFVCPEMQRQREPVQQLLSWLVAQ 295 >UniRef50_A1AYS4 Transcriptional regulator, LysR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1AYS4_PARDP Length = 294 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 67/300 (22%), Positives = 115/300 (38%), Gaps = 11/300 (3%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RP 59 M P L+A +AV R F RAA++L +TQ+AVS +I+ LE PL +R Sbjct: 1 MSIPPLAALRAFEAVARHLSFTRAAEELGMTQAAVSYQIRLLEERLATPLFLRKPRGIVL 60 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 TE G + E D S LS++ WL P L + P Sbjct: 61 TETGALFARPTIDAFDMLREAYADPSADSVS-TLSISTVPTFAGAWLSPRLGKFQMNHP- 118 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 L +++E + R ++ A+ P L ++Y + S A+K+ Sbjct: 119 NLAVRLETSDNLVD-FGREDITVAIRAGEGGWPGVEEHCLMPIEYTPMLSPELAKKH--E 175 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDL--PPGSVPCHIVNSSEAFVQLARQGTTC 237 + LL P++ D +D ++++ P +++ + A +G Sbjct: 176 LREPADLLNLPLL--DRVDPNWAVWMREAGVDFWESPPRPGLTLSTDLHEARAALEGYGV 233 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 ++ ELA+G LI P + Q +W + P+ R R + + +D Sbjct: 234 ALLTPRFFRFELATGSLIQPFPLVAQNGRSFWLVY-PKGRRNRPAIRKFRAFLLDEIARD 292 >UniRef50_B5J5W4 LysR substrate binding domain protein n=2 Tax=Alphaproteobacteria RepID=B5J5W4_9RHOB Length = 328 Score = 257 bits (657), Expect = 4e-67, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 100/298 (33%), Gaps = 11/298 (3%) Query: 1 MK----RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TV 55 M+ P + L ALDAV+R R AA +L +TQS VS+ I LE+ G L R Sbjct: 26 MRQRRFLPSIKLLMALDAVVRHRSVTVAAAELNLTQSTVSRLILSLEDQLGVELFTRERR 85 Query: 56 PPRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLA 115 P + + + ++ LSLAV WL P L L Sbjct: 86 RLIPNTAALSYQRDIARALNIVQQASMSVVANPLGGTLSLAVLPTFATRWLGPRLGQFLN 145 Query: 116 DSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEK 175 P + + V + A+ +L + FA+K Sbjct: 146 AHP-GIAVNVSTRIGHLD-FAGETFDAAIYYGLGDWDGVNHLRLFDETVTACVAPGFAQK 203 Query: 176 YFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGT 235 + L P++ + + + + + P + +++ +Q A G Sbjct: 204 H--PIRRLEDLAGLPMLQLESRPSVWSDWFEGQGGV-PYATGGMLMDQYSMMIQSAISGL 260 Query: 236 TCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 ++P + E+ G L+ + R YW + P ++ ++ + Sbjct: 261 GIALLPDYLAQIEIFEGRLVPVLERNVPVRGAYWLVW-PNDKVEHAPLKTFREWLGEQ 317 >UniRef50_C1D4J6 IciA n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D4J6_LARHH Length = 297 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 117/295 (39%), Positives = 166/295 (56%), Gaps = 2/295 (0%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 DY+ L AL+AV++ F++AA LCIT SAVSQRI+QLE GQ LL+R++P R T Sbjct: 1 MFDYKLLTALEAVVKAGSFDKAAALLCITPSAVSQRIRQLEERTGQLLLIRSLPVRATAA 60 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPL--LLSLAVNADSLATWLLPALAPVLADSPIR 120 G +LL +RQV LLEE+ + Q + L + VNADSL TWLLPA+A V+ Sbjct: 61 GHRLLRHVRQVALLEEDLQQELQGEAEGGLTPLPVGVNADSLGTWLLPAVAKVVWRERFV 120 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L V+DE T + LR GEVVG V+ Q C+ LG + Y F ++ F + P+G Sbjct: 121 LQAIVDDEAHTHDLLRSGEVVGCVTSHPQPPTGCISQPLGQMRYRFYATPDFVRNHLPDG 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 +TR A+L P +AF+ D +H ++ F L G P + S+ A + + G + Sbjct: 181 LTREAVLATPGIAFNRKDSLHFGQMEARFGLRLGDYPYLTMPSTHALFEAVKAGLGYGLS 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 P LQ+ + LASGE+IDL P L+WH +A +S + + T L+ + LR Sbjct: 241 PELQVGEALASGEVIDLLPDDPPSVSLFWHGWALQSPRLARFTATLVAEARQRLR 295 >UniRef50_B9JNL4 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JNL4_AGRRK Length = 342 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 64/298 (21%), Positives = 113/298 (37%), Gaps = 10/298 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPT 60 + P +L+A A R F RAA++L +T +AV Q+I+ LE+ GQPL RT + T Sbjct: 24 RLPPLTSLRAFVATARHLNFLRAAEELHVTSAAVGQQIRLLEDYLGQPLFHRTRGQLQLT 83 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 GQ L+ L + + ++V + WL+P L + +P Sbjct: 84 SAGQALVPGLTDAFDAVLGAMTQFAASDHEQPIRVSVAPSFASKWLIPRLDGLRRAAP-G 142 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L + V+ + + L G+ + A P +VD L + + + S FAE+++ Sbjct: 143 LQVLVDASAQLTD-LDSGDADCVIRYGSGAYPGLVVDHLFSEAVIPICSPEFAERHW-LR 200 Query: 181 VTRSALLKAPVVA-----FDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGT 235 A+ P++ DH A+L+ S ++ S + A G Sbjct: 201 NGPKAIEGVPLLHEDGAEHDHSCPDWNAWLRAEGLSYRLSQGGFRLSQSSLVIDAALAGQ 260 Query: 236 TCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 + E EL +G L+ Y+ + + D ++ Sbjct: 261 GLGLGKVRLAEAELRAGRLVSPFGSPQPVSFSYFFATTATKARLMR-VDLFRNWLQAE 317 >UniRef50_B1J9I9 Transcriptional regulator, LysR family n=15 Tax=Proteobacteria RepID=B1J9I9_PSEPW Length = 321 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 59/296 (19%), Positives = 100/296 (33%), Gaps = 11/296 (3%) Query: 8 TLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQGQKL 66 L R F R A++L IT AVSQ+++QLE G L +R + +GQ+L Sbjct: 12 WLHVFSCAARHLSFTRCAEELHITPGAVSQQMRQLEERLGYRLFLRRARGVELSAEGQRL 71 Query: 67 LALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVE 126 + + E L G L + LA WL P L P + L++ Sbjct: 72 AQTVAEAYGSIEAELLRLDAGEIRGTLRVRSIPSFLAKWLTPRLPRFQQRYP-DIELRLV 130 Query: 127 DETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSAL 186 E + + L G+ A+ + + P L L V S + P + L Sbjct: 131 AED-SAQALNPGDFDLAIDLNDGSYPGMLSTPLLDEQIFPVCSPALL-RGRPPLHGPADL 188 Query: 187 LKAPVVAF------DHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 P++ + +L+ H N + ++ A G + Sbjct: 189 AHYPLLHDITAWRGSSDFAEWEFYLEGIGAPRLDVRRGHTFNRNHLTIEAAIAGIGVAIA 248 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 + EL G LI G+ + P + + A+ D+ + + Sbjct: 249 RRTLLNDELERGALIVPF-GVPIANHKRYVVHYPPGGLNQPGARAVHDWLVEEAKS 303 >UniRef50_B5WPF6 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=B5WPF6_9BURK Length = 307 Score = 256 bits (655), Expect = 8e-67, Method: Composition-based stats. Identities = 65/297 (21%), Positives = 105/297 (35%), Gaps = 4/297 (1%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTE 61 P +L+A +A R F RAAQ+L +TQSAVS +I++LE G L R T+ Sbjct: 7 LPPLLSLRAFEAAARHLSFGRAAQELFVTQSAVSHQIQKLEADLGVALFERRTRAIELTD 66 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLL-LSLAVNADSLATWLLPALAPVLADSPIR 120 QG+ A + L + + ST LS+ + + + WL L P Sbjct: 67 QGRAYYAKVHAAFELLRLGTSEVRAFSTERTMLSVGLLSSFASRWLASRLHTFPLTHP-D 125 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + LQ+ + + + GEV A+ P KL + V S Sbjct: 126 IELQLRPDIALAD-VPGGEVDVAIRYGRGGWPGVASQKLMSERLSPVCSPSLITGKKRPR 184 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + LL+ P++ + + G ++ V+ A G M Sbjct: 185 KPQDLLLRFPLLTSYSTQPFEWEAWAHHAGVILGEAQRVQLHDYNIVVEAALAGQGVAMG 244 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 H I ++LA G L+ P + A + + +QD Sbjct: 245 RHRLIAQQLAQGSLVQALPETMLDDPRIGWWLVTRKGTLDAAAAAFCSWIMQTAQQD 301 >UniRef50_D0XI54 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XI54_VIBHA Length = 293 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 103/295 (34%), Gaps = 8/295 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 P +L+A +A R + F +AA++L +T++AVSQ++K LE L R T Sbjct: 3 NLPPLNSLKAFEATARLQSFTKAAEELNVTRAAVSQQVKSLEVYLDATLFERNGAQLNLT 62 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 + L ++ V + L+L V + WL+P LA P + Sbjct: 63 QAAHDYLPVVSHVFQSLSAATQHLFSRQKQAQLTLHVAHSFCSQWLMPRLADFHRQHP-K 121 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 ++ +V + + S +L +++ V+S F + Sbjct: 122 VSFKVSTTANAMPS-NSDIADVEIINGYGDWQSQQAIQLTQENWIVVASPGFL--HLNPI 178 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 S L + P +A + Q +L G S ++ A ++ Sbjct: 179 SHLSDLARLPKLATGGYQETWQCWLAYQGVECKGVKLTGEFEHSLLAIEAAVNQLGILLV 238 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 L +E L G L+ + R + E R A +++ + L Sbjct: 239 RDLLVEDHLQQGSLVQIGGWSMPSRGAHHMIVRGEER---PHVKAFIEWLRQSLE 290 >UniRef50_A3UHF6 Transcriptional regulatory protein n=2 Tax=Rhodobacterales RepID=A3UHF6_9RHOB Length = 327 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 63/300 (21%), Positives = 112/300 (37%), Gaps = 11/300 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPT 60 + P +L+A +AV+R R F+ AA +L ++ SA+S +I++LE L+ R T Sbjct: 25 RLPPLASLRAFEAVVRLRSFKAAAAELNVSSSAISHQIRRLETELNCRLMQRNRTGVTLT 84 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS--- 117 QG++ + + E + + + L+L + WL+P LA + Sbjct: 85 AQGERYAFGVTRGMERLLEATEELLSDTGQ-CLTLQTYSTFAIRWLVPRLASYSRATGQK 143 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 PIRL +++ V + I H P L V+S + E+Y Sbjct: 144 PIRL-----VTSQSDVDFSTDAVDACIMIGHPQDPQVAYRPLFNSHVFPVASPDYLERYG 198 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 P S L P++ D +L + +S + + A G Sbjct: 199 P-ISQPSDLRGHPLLQVYPSADDWSTWLTATGLSGISPAGEGLFDSYDLALNAAVGGMGV 257 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 + EL +G L++L P W+ P ++ A + + L +D Sbjct: 258 ALAIEPFAHAELETGALVELFPERRTALPGNWYFATPYAKRGLDKVAAFETWLLEELSRD 317 >UniRef50_Q7P212 Glycine cleavage activator protein n=1 Tax=Chromobacterium violaceum RepID=Q7P212_CHRVO Length = 306 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 99/298 (33%), Gaps = 8/298 (2%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-P 59 MK P L+ F RAA L +TQ A+S+ ++ LE +G L R Sbjct: 1 MKLPPLNALRVFVVAAEHLSFTRAAAALSLTQGAISRHVQTLEEYYGATLFTRQARGLAL 60 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 T +G+ L+ R+ L E + + L + + W+LP LA A P Sbjct: 61 TAEGEALVKPAREAFQLLNEASEALRLRQSD--LRVRMPPTPAMRWVLPNLADFQARHP- 117 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVS--IQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 L + + + R E AV +A P ++ + + V S Sbjct: 118 EYTLHLLTQLIHNKPFNRAEYDLAVVGLSSPEAAPDLRLECICREKLIPVCSPSLLAGKH 177 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 P L ++ + Q +L ++ E + A G Sbjct: 178 P-LHAPDDLKHHTLLHPWRDQNTWQRWLTLAGVSGVNPESGVTFDALEYALHAAVAGMGV 236 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 + + ++L SG L+ + + Y+ + E + A D+ + Sbjct: 237 TLAQASMVTQDLDSGRLVIPFDTVLETEWAYYLVYPHELAEL-PKVRAFRDWLVHTVA 293 >UniRef50_A6SUS7 Transcriptional regulator n=3 Tax=Proteobacteria RepID=A6SUS7_JANMA Length = 298 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 58/294 (19%), Positives = 104/294 (35%), Gaps = 6/294 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 + P L A +A R F AA++LCIT SA S RI+ LE G+ L +R T Sbjct: 4 RLPPVHALSAFEAAARHGSFAIAAEELCITPSAFSHRIRLLEEFVGERLFLRDGRSVSLT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 E G++ L ++R ++ + + + V LP LA A P Sbjct: 64 EFGRRYLDVVRDALRSLADFPLPHRHPLAQPRVKITVPPTFARYLFLPHLADFTALYP-D 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + ++V + + P +KL V S + EK Sbjct: 123 ITIEVFLSVPLYDMALSET-DLEIRFGAGKYPDTTTEKLFEEPVFPVVSPAYLEKIGG-L 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 T + L KA ++ + QA+ + P ++ ++ R G + Sbjct: 181 KTPADLQKAQLLRS--ALEPWQAWFEVAGLDWPEPATGLRIDDLGLLLEAVRHGYGVALT 238 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 E+ +A+GE++ L ++ +S R +++ + Sbjct: 239 RKHFAEEMIANGEVVPLFDIQLTTPQHAYYMVYEQSVRERPEVVLFMNWMMERF 292 >UniRef50_A3D4V0 Putative uncharacterized protein n=1 Tax=Shewanella baltica OS155 RepID=A3D4V0_SHEB5 Length = 302 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 97/297 (32%), Gaps = 10/297 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 + P L+A A+ R AA++L +TQSA+S +I+ +E+ L R T Sbjct: 4 RLPLLSALRAFTALARLGSINAAAEELSLTQSAISHQIRSIEDYLDVVLFNRDGRKMTLT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 + G+ +RQ P L ++V WLLP LA P Sbjct: 64 DAGRVYAYQIRQALDDIGSATDKLSRKPKPNQLVVSVLPSFAQYWLLPRLAGFALQYP-D 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L + + A+ H P + L L V+S F Sbjct: 123 FYLTLSATMAFSN-FNDDPIDCAIRFGHGDWPDLHCELLMGDSLLLVASPDF--NQGQLP 179 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 T + +++AP++ + +L S ++ AR G + Sbjct: 180 QTVAQVMQAPLLH---ASESWAVWLSAAGVEQLRPKGKLEFTDSTHLLEAARLGLGIALT 236 Query: 241 PHLQIEKELASGELIDLTP-GLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 + + GEL+ +T Y+ + + L + H + + Sbjct: 237 RRSIAQTLIDRGELVRVTEIEPTHPSANYYLVWPHRVNQTPALLQ-LTAWLHVEVSR 292 >UniRef50_Q1GH77 Transcriptional regulator, LysR family n=18 Tax=Rhodobacterales RepID=Q1GH77_SILST Length = 310 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 106/297 (35%), Gaps = 8/297 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P +L+AL+AV R AA +L +TQ AVS++++ LE G L++R T Sbjct: 15 LPSIASLRALEAVDRLGSASAAAVELSLTQGAVSRQLQALERQLGIELVLRDGKALSLTP 74 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 +R + Q+ L+LA+ WL+P L P Sbjct: 75 DATDYAQEVRHALDRIAQATLQVQSVPLAGSLNLAILPAFGMRWLMPRLPAFSRRHP--- 131 Query: 122 NLQVEDETRTQER-LRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 ++ + TR A+ H P L L V + ++ + Sbjct: 132 DVTINMSTRLSPFNFATQSFDAALHFGHADWPGTDSLLLKHEQLLPVCAPELVKRAKVD- 190 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 +L P++ + Q+ G++ + + Q A G ++ Sbjct: 191 -APGDILALPLLHIQTRPTAWADWFQRQQVPTSGTLGGSMYDQFSTINQAALHGLGVALM 249 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 P +E++LA+G L+ L P Y+ + P S+ D+ + + + Sbjct: 250 PDYLVEQDLATGRLVSLHPVPEDIGGAYYLVW-PTSKSRHSGLQKFRDWLAEQAQPE 305 >UniRef50_Q15X65 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15X65_PSEA6 Length = 297 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 66/299 (22%), Positives = 121/299 (40%), Gaps = 11/299 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPT 60 K P L+ A F+ AA+++ +TQ+A+SQ IK LE FG L VR T Sbjct: 3 KLPPLNALRYFLAAAETLSFKAAAEQMFVTQAAISQHIKTLEVFFGCQLFVRGHRHVSLT 62 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 + G++LL + ++ +G+ P +L+L V + WL+P L + P Sbjct: 63 KAGERLLPDIATGFSFLDKGVGNLVMDPRPNILNLTVIESLSSRWLVPRLYLFQQEYP-H 121 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 +N++++ R + E+ A+ P KL V A++ Sbjct: 122 INVRIQPTNRLLN-FDQNELDLAIRFGIGDYPQLKSRKLAQDTIHLVCHPGLAKQ----I 176 Query: 181 VTRSALLKAPVVAFDHLD--DMHQAFLQQNFDLPPGSVPCHIVNSSE-AFVQLARQGTTC 237 T ++ + P + D ++F Q + P V+ S ++ A G Sbjct: 177 DTAQSVSRHPTLTEKSSDILPAWKSFYQLHRINPDVGRNALHVDDSSVTIIEAALAGQGI 236 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 M+ + I ++L G+L+ L F+ Y+ APE+ R+ ++ + + Sbjct: 237 AMVRNSLIFEQLEKGQLVKLFNFSFKCHYAYY-LVAPEAHFKREKIQCFSNWLEGMFSE 294 >UniRef50_A1B0V2 Transcriptional regulator, LysR family n=2 Tax=cellular organisms RepID=A1B0V2_PARDP Length = 317 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 105/296 (35%), Gaps = 8/296 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRPTE 61 P L+A + R F RAA +L ITQS +S+ ++ +E+M G L RT TE Sbjct: 18 LPSVSALRAFVMAAQFRSFSRAADELDITQSGISRAVRSIEDMAGTQLFERTGHGLVLTE 77 Query: 62 QGQKLLALLRQVELLEEEWLGDEQT-GSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G + + T L++A WL P + +A +P Sbjct: 78 PGSVYYDEITSILSELGAATLRLSTYAEAADQLTIATLPSLGGRWLAPRIGRFIAQNPA- 136 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + + + + + + A+ ++ CL + L + + P Sbjct: 137 IEVSITAQIGHFD-FEGSSIDAAIHYGNEVWAGCLSEMLMDEVLIPFCAPALLRGTVPQ- 194 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 LL P++ H + + ++ P + ++ A+ G ++ Sbjct: 195 --ARLLLDLPLIQHLHRPTAWREWFREVGIEHPNPTRGMRFEQYQMGIEAAKTGLGAILM 252 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 P + +E+ +G+L+ L Y+ + P+++ + + R+ Sbjct: 253 PPFMVSEEIQNGQLVALHNLPVASPWRYYLVY-PKAKRSKPAVQKFRSWIRAEARR 307 >UniRef50_Q0HUM5 Transcriptional regulator, LysR family n=20 Tax=Gammaproteobacteria RepID=Q0HUM5_SHESR Length = 293 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 67/287 (23%), Positives = 113/287 (39%), Gaps = 10/287 (3%) Query: 12 LDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQGQKLLALL 70 AV F AAQ+L ++ + VS++I LEN G L RT TE+G Sbjct: 10 FVAVAEAENFTLAAQRLNVSTAHVSRQIGALENRLGTKLFYRTTRKVSLTEEGTIYYRHC 69 Query: 71 RQVELLEEEWLGDEQT--GSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVEDE 128 RQ++ EE GS L+ L +++P L + P + V+ Sbjct: 70 RQLQTGLEEAERAITDLKGSPQGLVKLTAPVAYGEKFIMPLLNDFMVQYPS-VEFNVDLT 128 Query: 129 TRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSALLK 188 RT + + G A+ + A S + L + + +S + EKY T S L + Sbjct: 129 NRTLDLI-EGGYDLAIRLGKLADSSLMAKPLSSRTHYMAASPSYVEKYG-QPHTLSELNQ 186 Query: 189 APVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIEKE 248 + +H + F++ + I NS A A +G +P IE++ Sbjct: 187 HNCLIGNHN---YWRFIENGRERNIKVRGNLICNSGYALRDAALKGIGIVQLPDYYIEED 243 Query: 249 LASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 + +G LI + + W + P++R + L+DY + L Sbjct: 244 IHAGRLISFLDAHREAKEGIWALY-PQNRHLSAKVRVLVDYLAEKLA 289 >UniRef50_B1JZS0 Transcriptional regulator, LysR family n=19 Tax=Burkholderiales RepID=B1JZS0_BURCC Length = 306 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 63/300 (21%), Positives = 113/300 (37%), Gaps = 10/300 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRPTE 61 P +TL+A +A +R + F RAA +L +TQ AVSQ I+ LE G PL R PT Sbjct: 6 LPPLQTLRAFEAAVRLQSFTRAADELALTQGAVSQHIRALEAQLGYPLFTRERNGATPTH 65 Query: 62 QGQKLLALLRQVELLEEEWLG-----DEQTGSTPLLLSLAVNADSLATWLLPALAPVLAD 116 L +RQ + E + + + L+++V WL P L A Sbjct: 66 AAHALALQVRQGLSVLERAFEPTLAVRRRPRTCDVTLNVSVLPSVAERWLAPRLPRFSAA 125 Query: 117 SPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY 176 P +++ + + +R + A+ P + +KL V+S + + Sbjct: 126 HP-HISIVLHPDVALAPLRKRDRIDVALRYGPGTWPGVVAEKLMNETIFPVASPAYRNRD 184 Query: 177 FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 T + L++A ++ + + Q S + A + A +G Sbjct: 185 GVAPRTPADLVRATLLRHPAQP--WEPWCQAARLDLTESARAPRFTDTNALIDAALKGRG 242 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 + IE EL G L+ ++ ++ + P + L D+ +R+ Sbjct: 243 VALARRSLIEPELTDGTLVRVSTVRITDVYAHYVVWRPGHPHEAAIRTWL-DWLRSEVRR 301 >UniRef50_Q7MHL5 Chromosome initiation inhibitor n=55 Tax=Vibrionaceae RepID=ICIA_VIBVY Length = 298 Score = 253 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 140/296 (47%), Positives = 197/296 (66%), Gaps = 2/296 (0%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 M+ DY+ ++ALDAV+ + GFERAA++L I+QSAVSQRIKQLE Q +L+R PP+PT Sbjct: 1 MRGLDYKWIEALDAVVAQGGFERAAEELYISQSAVSQRIKQLERFLAQSVLIREQPPKPT 60 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGST--PLLLSLAVNADSLATWLLPALAPVLADSP 118 G+KLL L R+V +LE E + + T P+ L+LA NADSLATWLLPAL V+ Sbjct: 61 PVGKKLLGLYRRVRILEHELIPELMNDDTAKPIQLALATNADSLATWLLPALKEVMTQRQ 120 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 + LNL + E+R+ E+L+ GEV GA+S++ Q + C D LG +DY+ V+S F ++YF Sbjct: 121 VELNLAIYGESRSIEKLKSGEVAGAISLESQPIAGCKADYLGRMDYVCVASPDFYQRYFA 180 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 GV L KAP V++D DD+H FL +F++ S+ H V SSEAFV+LA G C Sbjct: 181 AGVNYQTLRKAPAVSYDQYDDLHNRFLHDHFNISRDSIINHNVGSSEAFVRLAVSGIAYC 240 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 +IP LQIE+ELASG L+D+TPG +YWH + ES ++++++ A++ Y L Sbjct: 241 LIPKLQIEQELASGVLMDITPGFLLSYRIYWHHWQLESGVLKEISQAIVQYAQAHL 296 >UniRef50_Q28K92 Transcriptional regulator, LysR family n=2 Tax=Rhodobacteraceae RepID=Q28K92_JANSC Length = 321 Score = 253 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 60/297 (20%), Positives = 101/297 (34%), Gaps = 6/297 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPT 60 + Y +L+A +AV+R F AA L ++QSAVSQ +K LE GQ LLVR + T Sbjct: 15 RNLPYASLRAFEAVVRLGSFSAAAGDLGVSQSAVSQHVKSLEEWLGQELLVRGARASKGT 74 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTP-LLLSLAVNADSLATWLLPALAPVLADSPI 119 G L + + E + S + ++ TWL P L P Sbjct: 75 RYGTLLAREIDRGLGGISEVCTQIRAASHSDTTVVISCLPGFAFTWLFPRLLRFDLAHP- 133 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP- 178 L++ + + + H P+ VD L V + AE+ Sbjct: 134 DLSISI-ATDTGGRPFNPADADIGIRYGHGEFPNLRVDHLMGERLFPVCAPQVAERLTDV 192 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 + + LL+ ++ F + + + + P S +Q A +G Sbjct: 193 ASLGQHTLLQDEILNFGSANPSWEYWAEACGVHLPSRARTRRFGQSNLVLQAAIEGLGVA 252 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 + + L G L+ + + YW + L + K Sbjct: 253 LGREPLVLDALTDGRLVRPFTQNVKSPLSYW-LVRRKQADDSPKVQEFLKWIKKEAE 308 >UniRef50_A4XNC3 Transcriptional regulator, LysR family n=23 Tax=cellular organisms RepID=A4XNC3_PSEMY Length = 317 Score = 253 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 53/297 (17%), Positives = 97/297 (32%), Gaps = 6/297 (2%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQ 62 +L+ ++ R F AA + +Q A+SQ+IK+LE L R TE Sbjct: 8 ISLDSLRVFESAARLLSFTAAANEQGSSQPAISQQIKRLEQQLAVRLFDRVHRGLVLTEA 67 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 G+ LL +++ + L +L +A + A WL+P L P ++ Sbjct: 68 GELLLRYVQEGLHSLDSGLQAVVARQQHEVLQVATDFAFAAYWLMPRLQRFHQLHP-EVD 126 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 + + R GE+ A+S L + V S P Sbjct: 127 VSLVTTERDLGGNLPGEIDVAISFGDGRCKHGESLLLFGEEVFPVCSPHLLHGREPVDSA 186 Query: 183 RSALLKAPVVAFDHLDDMHQAF---LQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 + A+ + P S ++ +Q A G + Sbjct: 187 ALLARLPLLHLRPEARANWFAWDGVFRALGIAEPPSAGALRFDNYTLLIQAAIAGQGVAI 246 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 +++ LA G L+ + + Y+ PE + ++ +D+ L Sbjct: 247 GWRYLVDELLAQGLLVRMLDTSIRSAYGYY-VVMPERKRRARLVRCFVDWLQDELAS 302 >UniRef50_D0YXG6 D-serine dehydratase transcriptional activator n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YXG6_LISDA Length = 310 Score = 253 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 60/298 (20%), Positives = 100/298 (33%), Gaps = 13/298 (4%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQGQ 64 L + F RAA+ LC+TQSAVS +IK LE + G L +R T +GQ Sbjct: 11 LSGLHCFLIAADQMSFTRAAETLCLTQSAVSHKIKNLEEILGVKLFIRQPRKLTLTPEGQ 70 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQ 124 L +L + D ++ L+++V WL+P L L P + + Sbjct: 71 HLKEVLAHNFGDIALEIRDLKSTELSGELNVSVPPTFAQRWLVPRLKGFLDKYPS-VRVH 129 Query: 125 VEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEK----YFPNG 180 + + + A+ H KL L V S +A + + P Sbjct: 130 LRTRNDLVD-FQTESFDCAIYFGHGKYAGLHAVKLMDETMLPVCSHEYAVEHNLYHHPEN 188 Query: 181 VTRSALLK--APVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 + LL AP D+ + +LP + ++ +Q A +G Sbjct: 189 LILCLLLHDAAPWARAGRNDEWQYWAKRFGVELPDN---GCTFDRADLALQAAERGIGVA 245 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 M I ++L L+ Y+ + A + + Q Sbjct: 246 MGRRSFITEQLKENRLVTPFDMSVFSPQHYY-VVCRQDVKDSARIQAFQSWLMSEIAQ 302 >UniRef50_A0KBW7 Transcriptional regulator, LysR family n=12 Tax=Burkholderia RepID=A0KBW7_BURCH Length = 321 Score = 252 bits (646), Expect = 8e-66, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 97/295 (32%), Gaps = 14/295 (4%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P L+A DAV R F AA +L +T AV ++I+ LE+ FG PL R T+ Sbjct: 21 LPPLNALRAFDAVARHGSFAGAAAELHVTHWAVGKQIRLLEDWFGLPLFDRRPRGVALTD 80 Query: 62 QGQKLLALLRQVELLEEEWLGDEQT----GSTPLLLSLAVNADSLATWLLPALAPVLADS 117 +G LL + + + ++ + V WLLP LA + Sbjct: 81 EGAALLNDVSHAFERLGTAVVRLRHNTFTHRISGVVRVNVPMSFAFCWLLPRLADFHSRY 140 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 P ++++V +R + V + + L + + ++ Sbjct: 141 P-DIDVRVSTTSRKLRYVAD-AFDIGVRSGPEQGAGVVSRPLMPDLRVPACNPALLRQH- 197 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 + + L ++ +L++ + + + A +G Sbjct: 198 -PIQSVADLRHHTLLHSATTRSAWSHWLKEAGASDLRAARHVEFDHVNLQLGAAIEGLGV 256 Query: 238 CMIPHLQIEKELASGELIDL--TPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG 290 + I ++LA G L+ +P + R A ++ Sbjct: 257 ALASLPLIGRDLAEGRLVCPIASPVWRADD---YMLVTNADRADDAAVSAFEEWM 308 >UniRef50_A1K292 Probable transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=A1K292_AZOSB Length = 331 Score = 252 bits (646), Expect = 9e-66, Method: Composition-based stats. Identities = 63/312 (20%), Positives = 99/312 (31%), Gaps = 30/312 (9%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPT 60 K P L++ +A R F RAA +L +T AVS +I+ LE G L R R T Sbjct: 6 KLPPLPALRSFEAAARLLSFSRAADELHVTHGAVSHQIRALEAQLGLALFARDTRGLRLT 65 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G+ LL + + + P LS++V WL P LA L +P Sbjct: 66 PAGEALLQATNGALRGIADAVAGLRRHLRPDRLSVSVMPSFAGRWLAPRLAAFLDANP-G 124 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L V + R G A+ + L V S FA Sbjct: 125 CELNVLSSDAITDFARDGT-DLAIRWGFGGYSGVHSELLMDDVMFPVVSPHFA---GGVP 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 T + L P++ D + + P +++ S VQ A G + Sbjct: 181 RTPAGLAGLPLLRSVGED--WLPWFRAAGLDWPEPSRGLVLSDSGLLVQAAIDGQGVALA 238 Query: 241 PHLQIEKELASGELIDLT---------------------PGLFQRRMLYWHRFAPESRMM 279 + + G L+ P +R +W + P + Sbjct: 239 RRSLAMRAVREGRLLKPFDIEVPLLYGPGQGKPPSLGLAPDGTPKRWRFWLVW-PLTPAP 297 Query: 280 RKVTDALLDYGH 291 + + + H Sbjct: 298 TPLLQRFVAWLH 309 >UniRef50_Q7NUX8 Inhibitor of chromosome initiation IciA n=2 Tax=Chromobacterium group RepID=Q7NUX8_CHRVO Length = 312 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 122/298 (40%), Positives = 177/298 (59%), Gaps = 4/298 (1%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 D R LQ L AV GF++AA+KL +TQSAVSQRI+QLE GQP+L RT P TE Sbjct: 1 MFDPRQLQTLAAVAETGGFDKAAKKLFLTQSAVSQRIRQLEEQLGQPVLTRTSPAEATEA 60 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPL---LLSLAVNADSLATWLLPALAPVLADSPI 119 G++LL +Q+ L+E + L L++ VNADSLATW L A+ PVL + Sbjct: 61 GRQLLRHYQQLLLMENQLLQKLSPAPRQREFTTLAVGVNADSLATWYLQAVTPVLEAHDL 120 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 L++ V+D+ T E +R G V+G VS + + + + LGA+ YL +++ FA ++FP+ Sbjct: 121 LLDVVVDDQDHTHELMRTGHVMGCVSTRPVPIQTGVQHYLGAMRYLCLATPRFAARHFPD 180 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 GV +AL +AP + F D +H FL+Q G P V S++ FV+L RQG + Sbjct: 181 GVDHAALARAPSIIFSRKDAVHGQFLRQAIGYE-GGFPSFTVPSAQGFVELTRQGVAYSL 239 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 +P L ++ +L G L+DL PG + LYWH + ES + + +T+A+LDY + LRQD Sbjct: 240 LPELMLDGDLEDGRLVDLFPGQYMDLPLYWHHWRVESELSQALTEAMLDYCGRHLRQD 297 >UniRef50_Q7VV30 Putative LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7VV30_BORPE Length = 300 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 97/293 (33%), Gaps = 13/293 (4%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTE 61 P ++ + R AA +LC+T SAVS++I+ LE G+ L +R T Sbjct: 4 LPPLNAVRTFEVAGRLCSITEAAAELCVTPSAVSRQIRLLEEHLGRKLFIRQHRGVVLTT 63 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G + L + + + + + ++ WLLP LA A P + Sbjct: 64 IGHQYLGDISKALVEVRRATSEAAKPRQRAVFTVRAPHSIAMRWLLPRLARFHAAHP-HI 122 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 ++++ T R ++ V + L L + + V + A Sbjct: 123 DVKLHTS-LTPPDFEREDLDAGVMLGRGQWKGLLSHMLIRNELIPVCAPHKARALR---- 177 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 T + L ++ D A+L SS + A +G + Sbjct: 178 TPADLADETLLHVFGRPDDWVAWLGAAGVEHVDVHRGMKYESSALAYEAALEGYGIAIAQ 237 Query: 242 HLQIEKELASGELIDLTPGLF-QRRMLYWHRFAPE-----SRMMRKVTDALLD 288 I+K+L G L+ Q Y+ PE S + + D Sbjct: 238 KALIDKDLQEGRLVTPFDLSVDQSDYTYYFVLPPEGYKRRSPALDTFRRWVRD 290 >UniRef50_B4X3U4 LysR substrate binding domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X3U4_9GAMM Length = 320 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 55/298 (18%), Positives = 103/298 (34%), Gaps = 16/298 (5%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPT 60 + P L+A +A R ++AA +L +T +A+S I+ LE G L VR T Sbjct: 5 RLPSLSALRAFEAAARHESAKQAASELSVTATAISHHIRGLEESLGVALFVRKPRQLLLT 64 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 QG++L L + + + T L +L+ WLL + + P Sbjct: 65 PQGRELFVSLEAAFDSIGDAVDRVKAAPTRLAATLSTTPAVAVRWLLSWVCMLRDAHP-E 123 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 ++L++ L A+ P + +KL ++ S Sbjct: 124 IDLRIHASHEPVA-LDGVTADLAIRYGDGHWPGLVAEKLFDNTFIPACSPYL------KL 176 Query: 181 VTRSALLKAPVVAFDHLDDM-----HQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGT 235 + L P++ F + + ++ + + + A G Sbjct: 177 DNMADLTDHPLIHFRPHGALAAPMDWAGWQKRAQVAGLDVSAGLVFSDETHAISAAIGGQ 236 Query: 236 TCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 ++ I EL G L+ G ++ + PE+R V A+ D+ +V Sbjct: 237 GVALMSRTLIADELEEGRLVQPF-GPELEGKPFYLVY-PENRRDDPVIRAIRDWVMEV 292 >UniRef50_C1DBD5 Transcriptional regulator, LysR family n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DBD5_LARHH Length = 299 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 64/298 (21%), Positives = 106/298 (35%), Gaps = 10/298 (3%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP- 57 MKR P L A +AV R +AA +LC+T SAVS++I LE G LL R Sbjct: 1 MKRTCPSIHELLAFEAVSRHLSIAQAADELCVTPSAVSRQISGLERFVGIRLLARHGRRF 60 Query: 58 RPTEQGQKLLALLRQVELLEEEWLGDE-QTGSTPLLLSLAVNADSLATWLLPALAPVLAD 116 T G+ L ++ L E D LSLA WL+P L+ Sbjct: 61 TLTHAGRLYLQRIQPALLALENATLDLIDGPQGGGTLSLASVPTFTTKWLIPRLSDFSRL 120 Query: 117 SP-IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEK 175 P I L + + + +V A+ + P + + + +L V + Sbjct: 121 HPGITLAFHRHVSGKQAQPI---DVDAAIRYGNGVWPGVVSESITLRRFLLVGPPQGVDG 177 Query: 176 YFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGT 235 P + L + V+ + + Q P + ++ G Sbjct: 178 MAP-PRNPADLARQTVLQHQGEPSLWTEWAQIMQVPDLVPRPGPRFEHFGSLIRAVEAGM 236 Query: 236 TCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 ++P IE+EL G + + P ++ + PE + V +A + + Sbjct: 237 GYALVPVCLIEEELEQGRVAEPFPSAAILAQGHYLCYRPEQ-LESPVFEAFRSWILEE 293 >UniRef50_B9Z1E8 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1E8_9NEIS Length = 294 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 53/290 (18%), Positives = 99/290 (34%), Gaps = 10/290 (3%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQ 62 P L ++ R + RAA++L ++QSA+S++++ LE G L R R T+ Sbjct: 8 PSMSLLLVFESAARHESYTRAAEELSLSQSAISRQVQALEEHLGLKLFRREGRSVRLTDA 67 Query: 63 GQKLLALLRQVELLEEEWL-GDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G++ L + + S L LA + WLLP L A P Sbjct: 68 GRRYYLELSEALGRIRSATLQAMSSQSGTGALRLATLPTFGSKWLLPRLHEFYASHPG-- 125 Query: 122 NLQVEDETRTQE-RLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + + +R + E+ A+++ P + +L + + E Sbjct: 126 -VTIHIHSRIGDIDFNTSEIDAAITVGTGDWPGMMAHRLYNEFLVAIVDPSGVED--GQD 182 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + +K ++ + + +Q R G ++ Sbjct: 183 IAPDWAMKQTLLTVASNPQAWAEWFSHYHLDHRQMRMGPSFELTSHLIQAVRAGIGIGLV 242 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG 290 P I EL ELI + Y+ + P + + +T A D+ Sbjct: 243 PQALIMDELQRKELITIGEA-IASPRSYYLVYPPRNASLPSLT-AFRDWL 290 >UniRef50_A1WKP4 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WKP4_VEREI Length = 318 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 68/287 (23%), Positives = 107/287 (37%), Gaps = 9/287 (3%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQGQ 64 L++ +A R+ F AA +LC+TQ+A+S +I+ LE G L R R T G+ Sbjct: 15 LNALRSFEAAARQLSFTNAAHELCVTQAAISHQIRALEQSLGTQLFERRPRQVRLTVAGE 74 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQ 124 +LLA+L E L L LAV + WL+P L + P + L Sbjct: 75 QLLAVLSDSFDGIERVLASLGNPQVS-TLQLAVTPTFSSKWLMPRLPRFIDRHP-DIELH 132 Query: 125 VEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRS 184 + T + L RG+V AV + P +L V S P S Sbjct: 133 LH-HTAQADVLTRGQVDMAVIWTTRPPPRLWARRLFGTALTPVCSPALERPEHPLSQ-PS 190 Query: 185 ALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQ 244 A+ P++ + Q +L + +++ S A + A G + Sbjct: 191 AVCHYPLLH-EDGPQDWQRWLTHVGLSVRATRRGLVIDDSNALLTAAMAGRGIALGRLAL 249 Query: 245 IEKELASGELIDLTPGLFQRRMLYWHRFAPE---SRMMRKVTDALLD 288 I +L SG L+ + YW P + + L+D Sbjct: 250 IADDLRSGRLVRPFAQTIEAEGAYWLIAQPSMVAQPRFQSLAQFLMD 296 >UniRef50_A9ARM3 LysR family transcriptional regulator n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9ARM3_BURM1 Length = 306 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 106/297 (35%), Gaps = 7/297 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 P R L+ +V + R + AA +L +T SA+SQ+I +LE+ G LL R+ T Sbjct: 9 SLPSLRALRYFVSVGKHRSIKAAAAELHVTASAISQQILKLEDELGVSLLHRSARGIDIT 68 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQT-GSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 G + + L QV ++ + +++++ WL+P LA + P Sbjct: 69 PHGMRYMQELNQVFDRILRATDRLRSNANHTEIVTVSCAHSFAMQWLVPRLAQLAIAEP- 127 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 ++L++ R ++ AV + L V + ++ P Sbjct: 128 TVDLRISTTNRYAA-FAEDQIDFAVRHGTGRYHGLHSELLLDDPLSPVCNPRLIKQIGPF 186 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 + S L++ ++ + ++ A+L++ I S + A + Sbjct: 187 S-SFSDLVRTTLLHDERHNE-WLAWLEKYRADGIRGNKGAIFTDSNVAIHAAMACHGVAL 244 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 + EL G L L Y+ + E+ + K + Q Sbjct: 245 ARKSLVRSELDDGRLTILFDAPLTPEYAYYLVYPNETLDNPSAI-LFRKWIMKNVMQ 300 >UniRef50_C9Y5B3 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y5B3_CROTZ Length = 313 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 106/294 (36%), Gaps = 8/294 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 + L + F +AA+ L I+ SAV + + +LE G L R+ T Sbjct: 9 MDSFTALASFVRTAETLSFTQAARVLGISASAVGKNVARLEQKLGVRLFNRSTRSVSLTA 68 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTG--STPLLLSLAVNADSLATWLLPALAPVLADSPI 119 +G LLA R E + + + L +++ L+P L A P Sbjct: 69 EGATLLARCRPALEQLREAEAELTSATDTPSGRLRISLPV-IGYHLLMPFLPAFAARYP- 126 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 ++++++ R + G A+ A LG ++ +S + ++ Sbjct: 127 EIDIELDFSDRLVNLVDEG-FDVAIRSGEMADSRLTATTLGHFRFVLCASPVYLAEHGA- 184 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 T AL K + F + G+ VN+ EA ++ A G C Sbjct: 185 PQTPDALKKHRCILFRFPSTGLIQPWELTGLTMTGAPSALTVNNIEAMIRAAVAGMGICY 244 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 +P + L GEL ++ PG +RR + + SR + +D+ Sbjct: 245 VPDFIVNSLLTRGELQEVMPGCCERRGAFSALWQ-TSRYLSPRIRCFVDFLKAH 297 >UniRef50_B6IWX1 Glycine cleavage system transcriptional activator n=1 Tax=Rhodospirillum centenum SW RepID=B6IWX1_RHOCS Length = 304 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 102/294 (34%), Gaps = 9/294 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPT 60 + P L+A +A R F AA +L +TQ+AVS +I+ LE QPL R T T Sbjct: 4 RLPPLNALRAFEAAARRLSFTHAAAELGVTQAAVSYQIRLLEEHVRQPLFRRLTRRLELT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 E G+ L + + +LS++ + WL+P L P Sbjct: 64 EAGRDLAEAVADGFQRIGGAVERLTERRAGTVLSISTLQTFASQWLVPRLGHFQVLHP-E 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + ++++ R + R A+ P DK+ L V S E+ Sbjct: 123 IAVRLDASPRMVDLERE--FDVAIRNGRGDWPGLAADKVIDLSVAPVLSPALLERTGG-L 179 Query: 181 VTRSALLKAPVV--AFDHLDDMHQAFLQQNF--DLPPGSVPCHIVNSSEAFVQLARQGTT 236 + LL+ P++ + + +Q ++ + Q A G Sbjct: 180 AGPADLLRLPLLDTVDPDDRRLWLGWFRQAGVPVEAADLPASIQFDTQQFSGQAAMMGQG 239 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG 290 M+ E+A+G L+ PGL + + R A + Sbjct: 240 VAMVCPAFFGPEIAAGRLVPPFPGLLFDTGDAFWVVSSRRRAQEPDIRAFRAWV 293 >UniRef50_Q5LSX4 Transcriptional regulator, LysR family n=4 Tax=Alphaproteobacteria RepID=Q5LSX4_SILPO Length = 309 Score = 250 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 97/297 (32%), Gaps = 5/297 (1%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPT 60 + P L+A +A R F AAQ+L +TQ+A+S+++K LE+ +PL R T Sbjct: 5 RLPHLTWLRAFEASARHLSFTNAAQELNLTQAAISKQVKLLEHYLREPLFERKPRSLVLT 64 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 + G L +R + +L++ W+ P L P Sbjct: 65 KVGAAYLPKVRDGFERLAAGTEEVFGLRRSEVLTVRAPVGYSVNWIAPRLQGFFDRHP-E 123 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 +++ + ++ + P D+L V + E Sbjct: 124 TEVRL-VSSVWGDQFDNERFDLDIQYGTGRWPGYKADRLTWEVIKPVCAPSLLEGEHA-I 181 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + L ++ ++ + + S ++S + A +G + Sbjct: 182 RKPADLAHHRLLHVLGYEEGWAEWFRYAKVSGINSGQGLQFDTSLLAFEFASRGGGVALA 241 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 + E+ G L++ + ++ +PE+ D+ + D Sbjct: 242 RSSMLGIEIERGRLVEPFNIEAPLQEAFYLI-SPETGRDHPDAQKFRDWLIETAESD 297 >UniRef50_C3KRQ9 Transcriptional regulator, LysR family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KRQ9_RHISN Length = 302 Score = 250 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 99/295 (33%), Gaps = 6/295 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTE 61 P + L+A +AV R F RA ++L ITQSAVS IKQLE G L VR T Sbjct: 7 MPPLQALRAFEAVGRLLSFRRAGEELLITQSAVSHHIKQLEETLGVRLFVRKAKSIELTP 66 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G L + + + + + + ++V A WL+ LA + P + Sbjct: 67 AGSAYLDKTVEAFGIIADATSEMRRQVARQRVRVSVLPSFAANWLVSRLAGFMLKHP-EI 125 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 ++++ R + G V A+ + L + V S Sbjct: 126 EVELDPTLRLADFAADG-VDLAIRFGSGQSEGIRAEWLMNEELSPVVSLTLYGD-GSRFG 183 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 LL ++ + + + + + +Q A G + Sbjct: 184 EPGDLLLQTLL--ESWNPVGWELWLGEVGIDIRRARVLQLTDYNIVLQAALNGQGVAIGR 241 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 + LA+G LI P + + + P+ R + + + + Sbjct: 242 MHMVRDHLAAGRLIQPFPQTVRSEKIAYWLVMPQDRRLSAGAETFASWLKEEAAS 296 >UniRef50_Q145M0 Transcriptional regulator, LysR family n=15 Tax=Proteobacteria RepID=Q145M0_BURXL Length = 310 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 101/294 (34%), Gaps = 8/294 (2%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQ 62 P L+ +AV R G +AA++L +T SAVSQ+IK LE G L +R R TE+ Sbjct: 5 PPLTALRCFEAVARLGGVTQAARELHVTHSAVSQQIKVLEESMGVALFMRAARGLRLTEE 64 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IRL 121 G+ +R Q L + WL+P LA P R+ Sbjct: 65 GRLYALDIRMALRDITHATRRAQARPHESELVITTLPSFAQHWLVPRLASFRDAHPYYRI 124 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPF-AEKYFPNG 180 L + E R+G + + P KL + + V++ F Sbjct: 125 RLLTSLQ---VEDFRQGVSDIGIRMGQGHWPDVAQQKLFDDEMVVVAAPHFALAPDGRFP 181 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 VT + ++ P++ H+ P N S + QG + Sbjct: 182 VTAADVMACPLI-SSPDTPWHEWCQAAQVSEPAEGAVVLSANDSNLVIAAVLQGQGVALE 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 + LA GEL+ +T YW + + ++ + + Sbjct: 241 RRSLVAYALARGELLQITDIRVPYPYPYWLVWQ-QREILDAAQAHFAQWIEGEV 293 >UniRef50_B4EPZ1 LysR family regulatory protein n=8 Tax=Proteobacteria RepID=B4EPZ1_BURCJ Length = 330 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 62/306 (20%), Positives = 110/306 (35%), Gaps = 12/306 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPT 60 P L+ + R F RA Q+L +TQSAVS+++K LE L R + T Sbjct: 12 SLPSLDFLRGFECAARHLSFTRAGQELNVTQSAVSRQVKALEEQLRIELFHRHIRSLTLT 71 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 ++G++L + E +G + +SL+ A WL+P L A P Sbjct: 72 DKGRELYDAISFALSDLESVVGKLSSSVGQRAISLSTTVSFAALWLIPRLGSFRASYP-D 130 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF-PN 179 ++++V + ++ L+R + AV + D L + V S Sbjct: 131 IDVRVSATSEIED-LKRKRLHLAVRYAGPYTSTDDTDVLFRERVVAVCSPSLLTAMGDAA 189 Query: 180 GVTRSALLKAPVVAFDHLDDMHQA-----FLQQNFDLPPGSVPCHIVNSSEAFVQLARQG 234 + + L K ++ D L++ + + VQ A G Sbjct: 190 SMKPADLDKHVLLHLDDPRGEWPWHGWSHLLKELGVPRLRPAGALHFSQYDQLVQAAVDG 249 Query: 235 TTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRM---MRKVTDALLDYGH 291 + ++ L G L++L P Y P++ + +T+ LLD Sbjct: 250 HGIAIGRRPLVDGLLKQGRLVELFPHCTVASGSYVLVQNPDACNEFDIAVLTNWLLDQAC 309 Query: 292 KVLRQD 297 L + Sbjct: 310 PALAPE 315 >UniRef50_B0KIQ6 Transcriptional regulator, LysR family n=3 Tax=Gammaproteobacteria RepID=B0KIQ6_PSEPG Length = 296 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 63/288 (21%), Positives = 107/288 (37%), Gaps = 5/288 (1%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRPTEQ 62 L+A R + AA+ + +T A+SQ+I+ LE G LLVRT + T+ Sbjct: 5 LPLLALRAFTETARLGTLKAAAEHMGVTPGAISQQIRLLEERLGVTLLVRTRQGVQLTDA 64 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 G L L + E L + QT + L+++ ATWL+P L A P + Sbjct: 65 GTTLYPGLSRGFGQIESALAELQTVARTPTLTVSTVPAFAATWLVPRLGDFNARHP-DIE 123 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 ++VE + + L+R V A+ P L A L V+S P Sbjct: 124 VRVEASAKLVD-LQRDRVDVALRHGLGHYPGLQSIALMAPVLLPVASPALLAS-GPAIEA 181 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 + L P++ D + + ++ A G ++ Sbjct: 182 PADCLYYPLLQDGERADWPLWLQAHGCTVDGRCSRGPSFDEDLLLLRAALAGQGIALVQD 241 Query: 243 LQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG 290 +++L SG L+ + R Y+ A + + R A +D+ Sbjct: 242 HHAQEDLRSGRLVVAVDRPWPARFAYYA-VAHQQALKRPQVRAFIDWV 288 >UniRef50_A9I5L1 Transcriptional regulator, LysR-family n=3 Tax=Proteobacteria RepID=A9I5L1_BORPD Length = 305 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 60/298 (20%), Positives = 106/298 (35%), Gaps = 7/298 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRP-TE 61 P TL+A +AV R F RAA++L +TQ A+S ++++LE+ G PL VR T Sbjct: 7 LPPLMTLRAFEAVGRHLSFSRAAEELFVTQGAISHQVRKLEHALGGPLFVRRTRAIAFTP 66 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTG-STPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 +GQ +R L + + + L + + A A WL+P L P Sbjct: 67 RGQAYYQHVRAALDLLAQASRQARGAHAAAPQLKIGLLASFAARWLVPRLPAFTQAHP-D 125 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + LQ+ + + + G+V A+ + KL V + + Sbjct: 126 IGLQLVPDIGLAD-VAAGDVDLAIRYGRGHWQGVHLVKLMPECLAPVCAPALLGRRR-RF 183 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + +L+ P++ Q + S ++ ++ A G M Sbjct: 184 KSPGEILRYPLLVSHSRQPFEWDLWSQAQRVDLSSARTVHLHDYNIVIEAALAGQGIAMG 243 Query: 241 PHLQIEKELASGELIDLTPGL-FQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 I+ L +G L+ Q W P S + A + ++ Sbjct: 244 RLRLIQPLLDAGALVPPAGQADCQDENTGWWLVLPRS-ALPAPAAAFCQWIQAQAARE 300 >UniRef50_A6Y5L9 Transcriptional regulator n=2 Tax=Vibrio cholerae RepID=A6Y5L9_VIBCH Length = 299 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 103/298 (34%), Positives = 164/298 (55%), Gaps = 5/298 (1%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 M + A AVI E F+RAA++L +T SA+SQRIKQLE+ GQ L+VR P +PT Sbjct: 1 MSLLS-PQVVAFIAVIEEGSFDRAAKRLSVTPSAISQRIKQLEDKMGQLLVVRQFPCKPT 59 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPL----LLSLAVNADSLATWLLPALAPVLAD 116 G++LL+ ++Q+ LLE E D + S+AVN DSL+TWLL ALAP+ Sbjct: 60 PSGEQLLSRVQQMALLESEVTADLLPDARSNIHSSTFSIAVNEDSLSTWLLKALAPLCRT 119 Query: 117 SPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY 176 + +++V++E T E L+ G V+GA++ + + L C+V +LG + Y+ V++ E+Y Sbjct: 120 YNYQFDIRVDNEDFTLEYLKNGHVIGALTCEARPLQGCVVHELGKMRYVAVATPALFERY 179 Query: 177 FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 F +G+ A AP++ +DH D + + F++ H + S+ V+ A Sbjct: 180 FRHGLNVEAFQNAPMIDYDHKDFLQRRFIRTITGQEVLPRHVHYLPSATGIVEAALLEMG 239 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 C+ + +L +G+LIDL P LYW SR++ +T+AL+ +VL Sbjct: 240 WCVTLEGFLGDKLETGQLIDLAPNTALYAPLYWQHVGIRSRVLSTITNALITESKQVL 297 >UniRef50_A5V2G2 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V2G2_SPHWW Length = 294 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 62/295 (21%), Positives = 112/295 (37%), Gaps = 11/295 (3%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPPRPTEQ 62 P ++ +A R F RAA++L +TQ+AVS +I+ +E+ G PL VR+ + Sbjct: 6 PPLSAVRVFEAAARHLNFTRAAEELAMTQAAVSYQIRMIEDRLGTPLFVRSGRRVSLSPA 65 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 GQ+L + +E + +L+++ A WL P LA P + Sbjct: 66 GQRLAPAVTAAFDRLDEAFAKVRLA-ESGVLTISAAPGIAAGWLGPRLARFQLAKP-DIA 123 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 +++ + R EV + I P ++ ++ + S + ++ P Sbjct: 124 VRLLASHELVD-FARDEVDVGIRIGQGEWPGLRAIEMFGAEFTPMCSPAYIDRMGPF-TD 181 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPG--SVPCHIVNSSEAFVQLARQGTTCCMI 240 + LL + + D +A+ + P V+S A G M+ Sbjct: 182 PAQLLDT--LRMNSDDVWWRAWFAEVGVAVPDDLDRGSIHVDSQVIEGMAATAGEGVAML 239 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 ELA+G L+ L P +W + PE R A ++ +R Sbjct: 240 TPRFWPFELATGRLVQLFP-HVGDGGSFWLVY-PEHRHGSSKVKAFREWLMAEVR 292 >UniRef50_A9AN03 LysR family transcriptional regulator n=5 Tax=Burkholderia cepacia complex RepID=A9AN03_BURM1 Length = 310 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 53/296 (17%), Positives = 101/296 (34%), Gaps = 7/296 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPT 60 K L V R ++AA LC++ AVSQ ++ LE+ L R T Sbjct: 3 KSIPLAALHTFVEVARCGSMKQAADLLCLSPGAVSQHVRHLEDRLAVRLFERNGRELELT 62 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTP-LLLSLAVNADSLATWLLPALAPVLADSPI 119 G+ L L E + + + L++ A TWL+ L A P Sbjct: 63 GTGRALFDALAGGFREIESAWANLHGANRRVVRLTVTTTASFANTWLVQRLGAFNAHYP- 121 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 + + ++ + + LRR V A+ P ++ + V S + P Sbjct: 122 EIEITIDTRPQLVD-LRRDYVDVAIRHGLGQYPGHASFRIWTPELWPVCSPQLLDPARP- 179 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 + L P++ D +L+ P + + ++ A + Sbjct: 180 IAQPADCLAYPLLQDADRAD-WVLWLRAQGIEDPRAQRGASFSDDALLIKAAVASQGIAL 238 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 + + E+A+G L+ + + + Y+ E+R A D+ + + Sbjct: 239 VRDIYARDEIAAGRLVRVLARPWPTELSYY-VVCNEARRDEWKIVAFRDWLAREIG 293 >UniRef50_B3RAJ7 Putative transcriptional regulator, LysR family n=1 Tax=Cupriavidus taiwanensis RepID=B3RAJ7_CUPTR Length = 313 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 106/296 (35%), Gaps = 9/296 (3%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRP 59 ++ P +L+A +A RAA L IT+SAVS++I LE++ G L R Sbjct: 3 LRLPSLSSLRAFEAAALHLNLRRAAADLFITESAVSRQIASLESLLGVQLFHRANQRITL 62 Query: 60 TEQGQKLLALLRQVEL-LEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 T G +R++ L+ + L + LA WL+P L A P Sbjct: 63 TAAGALYSVQVREMLRKLQRDTLEVMAHEGAGGTVELACVPTLAVEWLIPRLPDFYARHP 122 Query: 119 IRLNLQVEDETRTQERLRRGE-VVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 + V ++ L G A+ P D L + + V + Sbjct: 123 ---QVVVNISAQSDVFLFDGTPYDAAIHFGEAVYPGARADLLFGEESVAVCHPQLFGR-- 177 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 + + AP++ + +++ ++ + + AR G Sbjct: 178 KKRIDAHDIANAPLLHLATRSFGWKQWMEAAGIDDVNAMRGARFDHHSMVIAAARAGLGI 237 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 ++P +E+ LASG+L+ + Y+ P++R M L + + Sbjct: 238 GLVPRFLVEEYLASGQLVSPVARSLRATSAYY-LVQPDTRPMSHAMQHLRAWLLEA 292 >UniRef50_Q2CH16 Probable transcription regulator protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CH16_9RHOB Length = 296 Score = 249 bits (637), Expect = 8e-65, Method: Composition-based stats. Identities = 57/296 (19%), Positives = 105/296 (35%), Gaps = 5/296 (1%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPT 60 + P L+ +A R F+RAA++L +T +AVS +IK LE+ G L R +PT Sbjct: 4 RLPPLTALRTFEAAARHESFKRAAEELHVTNAAVSHQIKTLEDKLGLSLFRRRGRAVQPT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 + ++ L Q E + Q L +AV +LP L+ A P Sbjct: 64 DAAKRFAGRLAQAFDTIEAATMELQGNPMSGTLRIAVTPFYGNRIVLPRLSRFHALYP-E 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + ++ E + ++ GA+ P + L V++ + Sbjct: 123 IRVEPEMSETRIN-FAKTDLDGALRYGTGNWPGLTAIAMHEDQLLPVAAPTVVSRR-DLP 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 ++ + + + + D +D A+ + S S V LA G + Sbjct: 181 LSAAEIAQLTLGYIDGQEDDWSAWFEMMGYEGVASTQMIGYGSRARVVDLAFSGHGVALA 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 ++ +G L+ L W + P++ A D+ + Q Sbjct: 241 DRRLTAADVTAGHLVRLNDTPVSTGRGIWLVY-PDTEFPDPRLMAFGDWFRTEIGQ 295 >UniRef50_Q2T9B3 Transcriptional regulator, LysR family n=54 Tax=Burkholderia RepID=Q2T9B3_BURTA Length = 297 Score = 249 bits (637), Expect = 9e-65, Method: Composition-based stats. Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 6/297 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 DY L AL VIR FERAA+ L ++ SAVSQR+K LE G L+ R +P T Sbjct: 1 MLDYALLDALAEVIRHGSFERAAKALNVSPSAVSQRVKLLEERVGSVLVKRGLPCVATTS 60 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTP-----LLLSLAVNADSLATWLLPALAPVLADS 117 G L +V +LE E G + L +AVN DS+ATW + A+ A+S Sbjct: 61 GALLCRHTERVRMLEAELSGHMPAFAGAQTGAWPTLRVAVNDDSVATWFVDAVGSFCAES 120 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 L+L ++D+ T ER+R G V GAV+ + + C +LG + Y V S F +YF Sbjct: 121 GTLLDLVIDDQDYTAERIRDGSVQGAVTALAEPIQGCRSTRLGRMRYHAVCSPAFHARYF 180 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 NGV R AL +AP V F+ D + F+++ + P H + +++ G Sbjct: 181 GNGVNRDALRRAPCVMFNPKDSLQARFIRRVTRVDLDP-PKHWIPHVAGYLRACEAGLGW 239 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 M P +E+ +A+GEL+DL+ G LYW + + + AL + L Sbjct: 240 GMCPERMVERRIAAGELVDLSDGRSIDVELYWQSWRLSIGWLDEFGAALKASAAQYL 296 >UniRef50_Q161D2 Transcriptional regulator, LysR family, putative n=6 Tax=Rhodobacterales RepID=Q161D2_ROSDO Length = 295 Score = 249 bits (637), Expect = 9e-65, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 100/294 (34%), Gaps = 12/294 (4%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P L +AV R AA +L +TQSAVS++IK LE G L R T Sbjct: 8 LPSITALTCFEAVARLGSATDAAAELSLTQSAVSRQIKALEGQLGITLFERRGRQLILTS 67 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 +G ++ +R + +T + L+L++ WL P L P Sbjct: 68 RGAAYVSDIRDILQRLTRASVAVRTDARAGALNLSILPAFGMHWLAPRLQDFAQTHP--- 124 Query: 122 NLQVEDETRTQE-RLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + V TR R + A+ + P+ L + V + Sbjct: 125 EVTVNLSTRLAPFDFRDTQFDAAIHFGREDWPAADYLPLMPETVVAVCAPSLIP---TPL 181 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 +L ++ + +L+ + D+ P + + Q A G ++ Sbjct: 182 SDARGILSHDLMHLETRPRGWVRWLR-SLDIDASLPPGMVFDQFSTMAQAAVHGLGVALL 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRF---APESRMMRKVTDALLDYGH 291 P + L SG+L+ +P Q Y+ + ES + L D Sbjct: 241 PTFVADPFLNSGQLVLASPHANQSIGSYYLVWPKDREESHSLTSFRTWLRDQAR 294 >UniRef50_Q0KBJ5 Transcriptional regulator, LysR-family n=1 Tax=Ralstonia eutropha H16 RepID=Q0KBJ5_RALEH Length = 301 Score = 249 bits (637), Expect = 9e-65, Method: Composition-based stats. Identities = 54/295 (18%), Positives = 103/295 (34%), Gaps = 11/295 (3%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-P 57 M+R P L +A R+ F RAA ++C+T+SAVS++I LE G L R Sbjct: 1 MRRKIPSTIALAVFEAAARQGSFARAASEVCLTESAVSRQIATLETYLGVKLFTRVRKQV 60 Query: 58 RPTEQGQKLLALLRQVELLEEEWLGDEQTGST-PLLLSLAVNADSLATWLLPALAPVLAD 116 + G+ L + + E +L LAV WLLP L Sbjct: 61 VLNDAGRLYLKNIARNLAEIEAHTSALMAHKGVGGVLELAVIPTFANRWLLPRLRDFRER 120 Query: 117 SPIRLNLQVEDETRTQER-LRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEK 175 P ++ + R A++ +H A + + L + + + S + + Sbjct: 121 HP---DIILNLSERPLPFSFDETNFDAALNFEHPAWTNVVRVDLFDEELVPIVSPRYFDT 177 Query: 176 YFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGT 235 + L + P++ + + + V ++ AR G Sbjct: 178 QLLG--APADLAELPLLHKSTRPEAWRHWFAMAAVADFTPVSSMHFELYGMVIEAARAGL 235 Query: 236 TCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG 290 ++P + ++ E+ +L+ L + + PE + + D+ Sbjct: 236 GAGLVPRMYVQDEIERNDLVVPFD-LSLKHEKRYCLVYPERKKDSALVQLFRDWV 289 >UniRef50_C4LDC5 Transcriptional regulator, LysR family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LDC5_TOLAT Length = 339 Score = 249 bits (637), Expect = 9e-65, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 104/298 (34%), Gaps = 10/298 (3%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQGQ 64 L + R F +AA++L +TQ A+SQRI++LE + L +R T +G+ Sbjct: 8 LALLHTFEVSARHLSFTKAAEELYLTQGAISQRIRRLEELLRFKLFIRLTRKLMLTPEGE 67 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQ 124 +LL L E + D + +L + + WL+P L L+L Sbjct: 68 QLLLALTSSLQQINEVIEDIRFNELRGMLCIGLPPAFGQLWLMPRLTSFKTTY-RSLDLL 126 Query: 125 VEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRS 184 + V AV + +LP L + V S +A + ++ Sbjct: 127 FYGQ-HGLPNFEAEPVDMAVYYGNASLPHLHSWTLLEEWLVPVCSPEYAASHGLLSTDKT 185 Query: 185 ALLKAPVVAFDHLDDM------HQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 L K ++ + Q + Q + P S ++ N ++ A+ G Sbjct: 186 DLRKCSLLHCTESLEQFEFGYEWQHWSQSTGVVLPHSNRKYVFNQHAMALEAAKHGMGLA 245 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 M + + GEL+ M Y + + R A + + + + Sbjct: 246 MGRWFLVMPAVLRGELVMPVDYKIPSGMGY-QLYCSREHVQRPRYQAFAQWLQRTIDE 302 >UniRef50_P12529 HTH-type transcriptional activator ampR n=19 Tax=Bacteria RepID=AMPR_CITFR Length = 291 Score = 249 bits (637), Expect = 9e-65, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 97/293 (33%), Gaps = 9/293 (3%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQ 62 +L+A +A R F RAA +L +T SA+SQ +K LE L VR T + Sbjct: 6 IPLNSLRAFEAAARHLSFTRAAIELNVTHSAISQHVKSLEQQLNCQLFVRGSRGLMLTTE 65 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 G+ LL +L L T T L + V L P L+ P ++ Sbjct: 66 GESLLPVLNDSFDRMAGMLDRFATKQTQEKLKIGVVGTFAIGCLFPLLSDFKRSYP-HID 124 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 L + + G + + A L + + S A + T Sbjct: 125 LHISTHNNRVDPAAEG-LDYTIRYGGGAWHDTDAQYLCSALMSPLCSPTLASQ----IQT 179 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 + +LK P++ D+ P + + +SS ++ A+ G + P Sbjct: 180 PADILKFPLLRSYRRDEWALWMQAAGEAPPSPTHNVMVFDSSVTMLEAAQGGMGVAIAPV 239 Query: 243 LQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 L+S ++ YW +SR + VL Sbjct: 240 RMFTHLLSSERIVQPF-LTQIDLGSYW-ITRLQSRPETPAMREFSRWLTGVLH 290 >UniRef50_Q1GPJ4 Transcriptional regulator, LysR family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GPJ4_SPHAL Length = 310 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 113/299 (37%), Gaps = 11/299 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPPRPT 60 + P +++ +A R + F RAA++L +TQ+A+S +I+QLE+ G+ L VR R + Sbjct: 7 RIPPLAAVRSFEAAGRLQNFSRAAEELGMTQAAISYQIRQLEDRLGRALFVREKGRVRLS 66 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 E GQ+LL + + + +L++ TWL + P Sbjct: 67 ETGQRLLPAISNAFATMSDAFAALGS-DEADVLTINAVTSFGGTWLSARIGGFQLLYP-E 124 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L +++ + V A+ + P D L ++S F EK+ Sbjct: 125 LAVRMSMGNDLID-FNASNVDVAIRMGRGQWPGLRSDFLMRQHVAPLASPAFVEKH--RI 181 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPP--GSVPCHIVNSSEAFVQLARQGTTCC 238 + LL +A D + P S ++S + G Sbjct: 182 REPADLLCVERLA--PNDSWWADWFAAAGVATPLAPSRRGIELDSQLQEASAVQAGFGVA 239 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 M+ L + E+A+G ++ L W E+R+ + + ++ H L +D Sbjct: 240 MMTPLFWQAEIAAGRMVQPFDTLHISESAMWLVHR-ENRVGVRKIERFREWLHAELAKD 297 >UniRef50_A1TMH4 Transcriptional regulator, LysR family n=9 Tax=cellular organisms RepID=A1TMH4_ACIAC Length = 318 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 101/303 (33%), Positives = 156/303 (51%), Gaps = 8/303 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 DY L+AL AV+RE FERAA++L +T SAVSQR+KQLE GQ L+ R P TE Sbjct: 1 MLDYAGLEALAAVVREGSFERAARRLHVTPSAVSQRVKQLEERAGQVLVQRGTPCTGTEA 60 Query: 63 GQKLLALLRQVELLEEEWLGDE-----QTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 G++L L QV LLE E + + LAVN DSL+TW + A+A Sbjct: 61 GRRLCLHLEQVALLENELRRVHPALVPDAHAPAPTVKLAVNDDSLSTWFMDAMAAFAEGG 120 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 L+++++D+ T +RLR GEV+ AV+ A+ C LG++ Y+ +S F ++F Sbjct: 121 NELLDVRIDDQEHTAQRLREGEVIAAVTATAGAIAGCNTWPLGSMHYVAAASPAFVRRHF 180 Query: 178 PN---GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQG 234 GVT+ + +AP++ + D + +LQ+ P H + S++ F++ G Sbjct: 181 GPDTGGVTQDTIAQAPMMVYSRNDRLQDQWLQRQGLGSRRHPPRHFLPSNQGFLRSCEMG 240 Query: 235 TTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 M P + IE++LA G L+++ PG LYW + ++T ++ L Sbjct: 241 IGWGMHPTVLIERQLADGTLVEMLPGTGMDVALYWAHPRSAQAGLERLTQCVMAAAQAWL 300 Query: 295 RQD 297 D Sbjct: 301 GAD 303 >UniRef50_C4KCF0 Transcriptional regulator, ArgP, LysR family n=1 Tax=Thauera sp. MZ1T RepID=C4KCF0_THASP Length = 303 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 124/289 (42%), Positives = 170/289 (58%), Gaps = 3/289 (1%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLA 68 L A +AV++E GFERAA++L +TQSAVSQR+K LE GQ LLVR+ P RPT G++LL Sbjct: 6 LLAFEAVLQEGGFERAARRLALTQSAVSQRVKLLEAELGQVLLVRSKPVRPTPAGRRLLP 65 Query: 69 LLRQVELLEEEWLGDEQTGSTPLLLSLAV--NADSLATWLLPALAPVLADSPIRLNLQVE 126 L Q+ L+E E L LAV NADSLATW + A+A V+ D I L+ V+ Sbjct: 66 YLAQLRLMEAEARRALSPREVDGPLRLAVGVNADSLATWFIGAVAEVVRDEGIVLDCVVD 125 Query: 127 DETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSAL 186 D+ T L GEV+G VS + + C +LGA+ YL S F ++FP G+T +AL Sbjct: 126 DQDHTHALLADGEVLGCVSTRADPMRGCAAVRLGAMPYLCAGSPDFRARWFPQGLTPAAL 185 Query: 187 LKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIE 246 +AP + F H DDMH+AFL ++F L P H+V SSE F+ A G +P +Q Sbjct: 186 ARAPAIVFGHHDDMHEAFLLRHFGLDSRRYPHHVVPSSEGFMAFALAGLGYGFVPEIQAR 245 Query: 247 KELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 LA GEL+DL P + +LYWH + +S +M ++ A+ D + L Sbjct: 246 AHLARGELVDLAPE-REEVVLYWHHWQVQSPVMARLAQAIGDAAGRALG 293 >UniRef50_Q11AM5 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11AM5_MESSB Length = 308 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 108/294 (36%), Gaps = 9/294 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P ++ L A + V R F RAA++L +TQSAVS++++QLE G LL R T Sbjct: 8 MPSFQELVAFETVARRGNFTRAAEELALTQSAVSKQLQQLERSLGAVLLKRNRGQVSLTP 67 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPL-LLSLAVNADSLATWLLPALAPVLADSPIR 120 G L +++ +L++ V + WL+P L L P Sbjct: 68 AGFTYLNATQEILARFRMAAMSVGAAGGKESVLNVVVLPTFASQWLMPRLPRFLEIWP-- 125 Query: 121 LNLQVEDETRTQE-RLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 NL V TR + A+ ++ ++ V S F +++ Sbjct: 126 -NLTVNLTTRVEPYDFHGNSYDVAIHYAAVNWDGPDAIRICGELFIPVVSPEFRDRF--Q 182 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 S + A ++ + + + + + +++ + A G + Sbjct: 183 LFDPSDVANATLLQQADRPGLWSEWFEASGIMCRDPYRGPVLDRFSMTIGAACAGLGVAL 242 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 +P + EL S L+ L+ + Y+ P S++ A ++ + Sbjct: 243 VPIFLVATELMSKVLVTLSTKPYPGAGAYYALI-PPSKLRDPHATAFREWLVEE 295 >UniRef50_Q1GXZ2 Transcriptional regulator, LysR family n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GXZ2_METFK Length = 291 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 56/296 (18%), Positives = 103/296 (34%), Gaps = 10/296 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTE 61 ++ V++ F AA+ L I++ VS+R+ +LE G LL RT PTE Sbjct: 1 MSPLEQMRIYAEVVKHGNFTAAARHLGISKQLVSRRVMELEERLGARLLQRTTRKLSPTE 60 Query: 62 QGQKLLALLRQVELLEEEWLGDEQT--GSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 G+ + + +E + + G LL L+ + L PAL + P Sbjct: 61 LGRVFFTRCQTILQEIDEAEQEVASSTGELRGLLRLSAPVSFASMVLSPALNRFMQLHP- 119 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 L + ++ + R + + G A+ I Q + KL + S + ++ Sbjct: 120 NLEVALDVDNRVVDLVGEG-YDMAIRITKQPDEGLIARKLADSALAYCCSPSYLAQHGA- 177 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 + L + + + F L P N E + A G Sbjct: 178 PQSPMQLGRHRCITSKAGE---WLFEDAGELLKLQVHPVLRSNHGEVMCEAAIAGLGIVG 234 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 +P + K L +G L+ + + + P R + + D+ + R Sbjct: 235 LPEFYVRKALETGALVQVLQEYTADIGAVYALYPPH-RQASLMVRSFADFLQEWFR 289 >UniRef50_A3K624 Transcriptional regulator, LysR family protein n=1 Tax=Sagittula stellata E-37 RepID=A3K624_9RHOB Length = 311 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 101/293 (34%), Gaps = 9/293 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P L+AL++ R + +L ++QSAVS+++K LE+ PL R T Sbjct: 8 LPPMTALRALESFERTGNVTQTGLELGVSQSAVSRQLKVLEDYLDTPLFTRDRKAIALTP 67 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 + +R + L++A+ WL P L +A P Sbjct: 68 AARDYCTQIRAALEQIGTASLRLKANPRGGQLNIAMLPAFGVRWLAPRLPDFVARHP--- 124 Query: 122 NLQVEDETRTQE-RLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + V TR + GA+ + +L + V+S A N Sbjct: 125 EVTVNLSTRLKPFDFASEPFHGAIHFGGRDWSDVAYQELMREYVVPVASPKVAGTLRGNT 184 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 +T L P++ + D + + Q + + + + VQ A G ++ Sbjct: 185 LT--DLFSLPLLHLETRPDAWEKWAQALGE-EVECPVGMLFDQFASMVQAAIHGMGAALL 241 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 P +E EL G L+ L Y+ + + + +D+ K Sbjct: 242 PTYLVENELQDGRLVALWSESKTSVGTYYFVWPKDEPNYQPRA-LFVDWLRKA 293 >UniRef50_A6VT77 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6VT77_MARMS Length = 309 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 53/300 (17%), Positives = 105/300 (35%), Gaps = 13/300 (4%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPP 57 M+R P L+ +A +R F +AA++L +TQSAVS++I+ LE + L +R Sbjct: 6 MRRYIPSSTALKCFEASVRHLSFTKAAEELHLTQSAVSRQIRNLEEFLSRDLFIRLNKRL 65 Query: 58 RPTEQGQKLLALLRQVELLEEEW-LGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLAD 116 T G + + E L L+++ + WL+P LA A+ Sbjct: 66 VLTGTGAAYYKEVVPLLDGMENACLRMLHREDEKTTLTISALPTLASYWLMPLLAQFQAE 125 Query: 117 SP-IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEK 175 P ++ ++ D+ + + + P + +L + V S + Sbjct: 126 HPQFQIKVRSLDDAAKIDP---ESIDIILHYGGDHWPRAVSYQLMKESVVAVCSPELLSR 182 Query: 176 YFPNGVTRS---ALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLAR 232 V + P + + ++ L GS ++ A+ Sbjct: 183 VGDKAVDAWTVKDVTAFPFLHLSSRINAWPDWMVAQG-LESGSFAGASFAHFHMLLEAAK 241 Query: 233 QGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHK 292 ++P + E+ L +GEL+ Y + + + +V D+ Sbjct: 242 NSMGIAIMPTILAERSLRNGELVAPFGKAVSTPHEYLLSYPIDKADLEQVV-IFRDWLLA 300 >UniRef50_B9JLT3 Transcriptional regulator protein n=2 Tax=Rhizobiales RepID=B9JLT3_AGRRK Length = 314 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 55/298 (18%), Positives = 110/298 (36%), Gaps = 10/298 (3%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQ 62 P L +A R R F AA++L ++Q AVS+ IK LE G L R T + Sbjct: 9 PSANYLFVFEAAARRRSFTAAAEELNVSQPAVSKTIKLLEEATGLKLFRREHTRLELTAE 68 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 GQ+L +Q L +T + + ++ + + WLLP L P + Sbjct: 69 GQRLYRETQQAFDHLHMVLTSLRTKHSNDTVRVSFSTSFVQLWLLPRLKDFKVKHP-DIA 127 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 L++E+ +R + L ++ + + P + + V + + ++ P V Sbjct: 128 LRIEESSRDDQDLNEEDIDISARLGAGKWPGIHAWHFVTEEVIPVCNADYLREHGPINV- 186 Query: 183 RSALLKAPVVAFDHLDDM---HQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 + LL ++ F+ + + +L + + + + ++ A G + Sbjct: 187 PADLLNHRLLHFEERHRVRLGWRDWLLHHSVPVARLAQDFVFTDALSSIEAAVLGQGIAL 246 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 + + +G L+ + + + P R + D+ L QD Sbjct: 247 GWKHLVHDHVQAGRLVYPLDAVHRSGQSIY-LVMPAQRPAKHGAMLFRDWL---LEQD 300 >UniRef50_P55576 Uncharacterized HTH-type transcriptional regulator y4mQ n=19 Tax=Proteobacteria RepID=Y4MQ_RHISN Length = 298 Score = 247 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 101/295 (34%), Gaps = 11/295 (3%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQG 63 ++ +A R F AA++L ++ SAVS I +LE G L RT T G Sbjct: 6 SLSAMRIFEAAARLGSFRAAAEELNLSPSAVSHAIMRLERDLGVALFERTTRSVSLTVAG 65 Query: 64 QKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNL 123 Q LL + + LL L A L P L L ++P + + Sbjct: 66 QTLLNHASNAFEELRRGVEQISSNKAQ-LLRLHCAPSFAAQVLSPRLPQFLKENP-GIEV 123 Query: 124 QVEDETRTQERLRRGEVVGAVSIQ-HQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 +V T + G + +V L L + + A + + Sbjct: 124 RVAASTNYARFV-DGLFDADIVYGEPLNREDLIVIPLSEEIVLPLCAPDLAHQ----IKS 178 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 L P++ D + + N DL P P + S V A G + Sbjct: 179 PRDLFHQPLIRSDLKRIQWIDWFEAN-DLGPPPSPSMSFDRSFLAVDAAVNGLGIALESD 237 Query: 243 LQIEKELASGELIDLTPGLFQRRMLY-WHRFAPESRMMRKVTDALLDYGHKVLRQ 296 + +EL SG+L+ + + + P+S R++ A D+ + + Sbjct: 238 VLARRELESGKLVRPLHRICRDNRYIGHYLAYPKSGSQRRLARAFADWLTRECQP 292 >UniRef50_B6ITN2 Transcriptional regulator, LysR family protein n=1 Tax=Rhodospirillum centenum SW RepID=B6ITN2_RHOCS Length = 311 Score = 247 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 60/299 (20%), Positives = 106/299 (35%), Gaps = 11/299 (3%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQGQ 64 L+ V R F RAA+++ +++SA S+RI +LE G L RT T+ GQ Sbjct: 4 LDDLRLFTCVAETRSFTRAAERMGLSKSAASRRIAELEARLGARLFHRTTRSISLTQVGQ 63 Query: 65 KLLALLRQVELLEEEW--LGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 + Q+ EE L Q + +L LA L PA+ P + Sbjct: 64 GFHERVSQILADLEEAEGLVASQHAAPRGVLKLAAPMSFGLLHLGPAICAFQERFP-EVQ 122 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 + V+ R + + G AV I S + ++ + V+S + ++ T Sbjct: 123 VDVDLSDRFVDLVDEG-YDLAVRIGRLKDSSLIARRICPARRVAVASPAYLQRRG-EPAT 180 Query: 183 RSALLKAPVVAFDHLD-DMHQAFLQQNFDLPPGSVP---CHIVNSSEAFVQLARQGTTCC 238 AL + + + + H +F N+ + A G Sbjct: 181 PDALAEHDCLHYSNASVADHWSFRAAPGSEMLRPARPAVTMRANNGDILRTAAVAGRGIA 240 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 ++P + +LA+G L + H P +R + A +D+ + Sbjct: 241 VLPTFIVGDDLAAGRLRAVLLDWTVSPSAL-HAVYPANRHLSPKVRAFVDFIATRFGPE 298 >UniRef50_A9BYV3 Transcriptional regulator, LysR family n=18 Tax=Proteobacteria RepID=A9BYV3_DELAS Length = 315 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 65/313 (20%), Positives = 108/313 (34%), Gaps = 19/313 (6%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR 58 M+R P + L ++ R + RAAQ+L +TQSAVS++I LE G L RT Sbjct: 1 MRRALPSTQALACFESAARHISYTRAAQELSLTQSAVSRQIIALEEFLGVQLFRRTRHGV 60 Query: 59 -PTEQGQKLLALLRQVEL-LEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLAD 116 TE G + + + LE + L L+LA WLLP L + + Sbjct: 61 LLTEAGTQYAQQVSRWLHGLERDTLDIMAHQGEGGPLNLAAVPTFATRWLLPRLPQLARE 120 Query: 117 SPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQ----ALPSCLVDKLGALDYLFVSSKPF 172 P + + ++ +TR A+ P L + + V S Sbjct: 121 HP-EVTVHIDVQTRPF-LFADTVFDAALYAGTPEQVARWPGVQAQWLMDEEVVPVCSPQL 178 Query: 173 AEKYFPNGVTRSAL-------LKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSE 225 R+ L + P++ Q + P ++ + Sbjct: 179 LATAQAREPGRAWLPVGADIVARMPLLQQSTRPYGWQQWFDAMGVAAPRALDGMRLELFS 238 Query: 226 AFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESR--MMRKVT 283 A QG ++P + IE+ELA G+LI P + Y+ + Sbjct: 239 MLAVAASQGLGVALMPPMLIEQELARGDLIIACPQPLRGNRAYYLVTPALAPDAQPAPAL 298 Query: 284 DALLDYGHKVLRQ 296 + + R+ Sbjct: 299 RVFSSWLQQRARE 311 >UniRef50_A3VZZ4 Transcriptional regulator, LysR family protein n=4 Tax=Alphaproteobacteria RepID=A3VZZ4_9RHOB Length = 306 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 108/297 (36%), Gaps = 13/297 (4%) Query: 1 MKRP--DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPP 57 M RP L+ + +R+ F RAA +L +TQ+AVS +I +LE+ G L +RT Sbjct: 3 MDRPDIPLNGLRTFEVALRQGSFTRAAIELRVTQAAVSHQIARLEDRLGAKLFLRTSGGL 62 Query: 58 RPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 PT++G+ L +L L L + V WLLP L+ Sbjct: 63 VPTDEGRDLYPVLEHGLDAIARALDRITGHRHIETLKVGVVTTFAVGWLLPRLSEFRRSH 122 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 P ++L++ E LR G + A+ + + + + AE Sbjct: 123 P-TIDLRISTNNNRVEILREG-LDMAIRYGAGTWTGHNAELVLEAPLTPLCAPSVAETL- 179 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 L + ++ D+ + F P ++ I +SS A +A G Sbjct: 180 ---SHPDCLSRQVLLRSYRSDEWSRWFAAAGASCP--ALTGPIFDSSIALADVASAGAGV 234 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLY--WHRFAPESRMMRKVTDALLDYGHK 292 ++P + LA G+L+ + W P + M T + + Sbjct: 235 ALLPVEMFARRLAEGQLVQPFATTVSAGRYFLTWPAERPSTPAMMDFTRWITRASAE 291 >UniRef50_C3K213 Putative LysR-family regulatory protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K213_PSEFS Length = 315 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 61/293 (20%), Positives = 105/293 (35%), Gaps = 7/293 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 + P LQA + + F RAA +L +T SA+S +I LE +G L R T Sbjct: 4 RPPPTPMLQAFVSAAQTGSFSRAASELNLTASAISHQIAGLEEWWGVQLFERHSRGVKLT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 GQ LL + + L G + L L+ + +TWL+P L ++ Sbjct: 64 AAGQALLPVTDGFFNALDGVLQSLNPGKSQP-LYLSCTSSLCSTWLIPRLHGSHTEASFN 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L+L + RL + AV + + P V+ L V S F Sbjct: 123 LDLVLTSADMNNTRLEAHQYDVAVVMGYGDYPDHHVELLMRDAVFPVCSPEFL--RLKGD 180 Query: 181 VTRSALLKAPVVA--FDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 ++ + + P++ D + +++ PP S + LA +GT Sbjct: 181 ISLEGVARYPLIHRVDDQVCPGWESWFAFQGLAPPPYHHGPRFPDSSLAISLAVKGTGIA 240 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGH 291 + + +L G L+ L + Y+ R L+++ Sbjct: 241 LGRTALVFDQLEDGALVALKSPVMMSPAAYYIICR-SGRQSEPDIARLIEWLK 292 >UniRef50_A9BQB4 Transcriptional regulator, LysR family n=7 Tax=Comamonadaceae RepID=A9BQB4_DELAS Length = 336 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 53/296 (17%), Positives = 106/296 (35%), Gaps = 9/296 (3%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRPTEQ 62 P L+A V+R G RAA+ L +TQSAVS++I++LE G PL R R T Sbjct: 8 PPTHLLRAFSTVVRFGGVSRAAEALHLTQSAVSKQIQELEKWVGVPLFERERKRLRLTPA 67 Query: 63 GQKLLALLRQVELLEEEWLGDE-QTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G++ +R + E + + + L L+ A WL+P L P ++ Sbjct: 68 GERYERAVRALLGQLEAATLELITSDDSRGALHLSSLPTFAAKWLIPRLPQFQQRYP-QI 126 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 L + + + A+ L ++ P Sbjct: 127 TLHFVPYVHSYQ-FDSPGLDCAILFGDGHWNGAHAHYLVGRQVALIA-PPRGAGPEARIT 184 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 T + + + + D + + + + + + ++ G ++P Sbjct: 185 TPQDVARCTRLRHVTIPDAWARWSEAHGVNGISPLAGPQFDQFQTIIRAVMAGMGIALVP 244 Query: 242 HLQIEKELASGELIDLTPGL-FQRRMLYWHRFAPESR---MMRKVTDALLDYGHKV 293 + E+A+G + + P +Q + YW + + + + L+D+ + Sbjct: 245 RCLVHDEIAAGLVNEPLPQHGYQSALGYWLCYPADRANHGTLGIFRNWLVDHAAQT 300 >UniRef50_Q1GKW2 Transcriptional regulator, LysR family n=6 Tax=Rhodobacterales RepID=Q1GKW2_SILST Length = 312 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 99/295 (33%), Gaps = 16/295 (5%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 + P L+A DA R F +AA +L +T +A+S +IK LE G PL R T Sbjct: 4 RLPPLTALRAFDAAARHMSFAKAADELSVTPAALSFQIKSLEEHLGAPLFRRLNRAVELT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 E G L + + + L++ A WL P L P Sbjct: 64 EAGAALAPGVDEGFQALSAAWRQARRVLDTTSLTVTAGPALTAKWLAPRLYEFARSHP-D 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 ++L++ + + LRR V A+ + + V + KY Sbjct: 123 IDLRLSAGLKMVD-LRRDHVDVAIRFGYSVDDYLVAQAARPEWLTPVMTPELCAKYP--- 178 Query: 181 VTRSALLKAPVVAFDH------LDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQG 234 T +L AP++ D D F + PG + ++ + A G Sbjct: 179 -TPQSLRDAPLIYDDSIGFLSPSCDWPTWFRAMGLEFTPG--HGTHFSHADHAIDAACAG 235 Query: 235 TTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDY 289 + I K++ G L+ + + P S R A ++ Sbjct: 236 LGVALGRRPMIIKDVQEGRLVAPFKVAIETDAKFHFLCLPSS-QDRPQIRAFREW 289 >UniRef50_A6UI16 Transcriptional regulator, LysR family n=17 Tax=Rhizobiales RepID=A6UI16_SINMW Length = 309 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 59/304 (19%), Positives = 107/304 (35%), Gaps = 15/304 (4%) Query: 1 MKR---PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP 57 MK L+ +A R F +A +L +TQ+AVS +I+ +E G+PL +R Sbjct: 8 MKMSKQFPLNALRVFEAAARLGSFTKAGDELGMTQTAVSYQIRLIEENIGEPLFLRRPRQ 67 Query: 58 R-PTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLAD 116 TE GQ L + + + + + + + LL + A + WL + + Sbjct: 68 IALTEVGQHLAPKVTEAFEMLHDAVASARGNAEAALL-INSTATFASQWLAREIGTFQLE 126 Query: 117 SPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY 176 P + +++ + + V A+ P +L +++ + S AE Sbjct: 127 HP-NIAVRLVANDAIID-FNKEAVDVAIRSGMGDWPGLASHRLMRVEFTPMLSPALAETV 184 Query: 177 FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGS--VPCHIVNSSEAFVQLARQG 234 T LLK ++ D D + + P P + + + A G Sbjct: 185 GG-VRTPRDLLKLRII--DPRDPWWSLWFRAAGVDDPDLDGRPGSRLGAQAFEARAAVAG 241 Query: 235 TTCC-MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 ++P ++A G L YW + P +R A D+ Sbjct: 242 QGVAILMPEFY-SDDVALGRLYQPFELRCSDGHDYWLVY-PHARRNAPKIRAFRDWILGK 299 Query: 294 LRQD 297 L D Sbjct: 300 LDPD 303 >UniRef50_B1ZJV5 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium populi BJ001 RepID=B1ZJV5_METPB Length = 295 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 102/291 (35%), Gaps = 7/291 (2%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQG 63 + L+A V R+ +RAA+ L +T AVSQ ++ LE FG PLL R R + G Sbjct: 6 SFGALRAFVEVGRQGSIKRAARSLNVTAGAVSQHVRALEAHFGMPLLERGHRSVRLSAHG 65 Query: 64 QKLLALLRQVELLEEEWLGDEQTGSTPLL-LSLAVNADSLATWLLPALAPVLADSPIRLN 122 +L A L ++ + + L ++ A WL P L +A P + Sbjct: 66 LRLFAELVPGFEQIDDAVQRLEDRRPRPRSLVVSTTPSFAACWLTPRLGGFVAQHP-EIE 124 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 L+VE + + G V A+ P L + V+S ++ P Sbjct: 125 LRVETSIQLADM-TCGRVDVAIRHGSGDYPGLNAALLFKPRLVAVASP-LLLRHGPLS-D 181 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 L+ P++ D F + +Q A G ++ Sbjct: 182 PIDCLQYPLLQDRDRADWPTWFDAHGIKRGRNATRGPSYADDALLIQAAIAGQGLAIVRD 241 Query: 243 LQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 + + L SG L+ Y+ +P +RM A + + Sbjct: 242 VYATRPLESGSLMRALDKSAPSTARYYAVVSP-NRMTAPKIIAFRQWIMRE 291 >UniRef50_B9Z657 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z657_9NEIS Length = 318 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 62/299 (20%), Positives = 99/299 (33%), Gaps = 10/299 (3%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQGQ 64 L + R F AA +LC+T SAVS RI +LE G L R + +++G+ Sbjct: 15 LAALHTFECAARHLSFTLAAAELCLTPSAVSHRILKLEQQLGFRLFQRRPRQLQLSDEGR 74 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQ 124 +L ALL + + D + L+L WL+P LA P + L Sbjct: 75 RLFALLNDSLQRVGQEIDDIRRHELSGTLTLFARPSLAQCWLVPRLADFGQRYPA-IRLD 133 Query: 125 VEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRS 184 + + R V A+ V L V S + + Sbjct: 134 LRTGNEEVD-FRTQPVDLALYYGTLPPAGQRVLPLMDETLTPVCSPDY-ARRRQLFERPE 191 Query: 185 ALLKAPVVAFDH------LDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 L ++ D QA+ Q+ + P I + S+ V A+ Sbjct: 192 QLAHCTLLHDARAWPQAGHDAEWQAWAAQHGIIGLDDAPAMIFDRSDLAVTAAQHHVGVA 251 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 M +E+ L G L+ P L R +++ PE + + D Sbjct: 252 MGRRRLVEQALRQGSLVAPFPVLSSRAAQHYYLVLPERSPPSPRLGVFIQWLMAQAGHD 310 >UniRef50_B8IHI3 Transcriptional regulator, LysR family n=5 Tax=Rhizobiales RepID=B8IHI3_METNO Length = 303 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 52/288 (18%), Positives = 99/288 (34%), Gaps = 6/288 (2%) Query: 5 DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQG 63 +R + AV R RAA +L +T SAVSQ+I+ LE G L+ ++ TE G Sbjct: 4 PFRAISVFHAVARSGSITRAADELGVTPSAVSQQIQTLEVSLGTALIGKSGRNIVLTEAG 63 Query: 64 QKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNL 123 ++ ++ E Q + L++ WLLP LA + P + L Sbjct: 64 ERYFEMIGGEIDRIMEATQRIQGFRSVTTLTVRATPSLSTKWLLPRLAAFVEAHP-DIEL 122 Query: 124 QVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTR 183 +++ ++ V + P + L ++ V + A P + Sbjct: 123 RLDGTNEPAA-FQKESVDLEIRHGTGGWPGLYAEGLVEENFRPVCAPSLAA---PGSLGP 178 Query: 184 SALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHL 243 L + ++ + + P + + + + A G + L Sbjct: 179 EDLARHRLIHSVKSQVQWGHWFKLAGVAPATRWRRLLFDRTHMAIDAAAGGLGIALESDL 238 Query: 244 QIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGH 291 + +LAS L + ++ P + + A LD+ Sbjct: 239 MLWGDLASNRLACPVRDPPRIALVTQWITCPHDHLRYRKVRAFLDWLR 286 >UniRef50_C3JN11 Transcriptional regulator, LysR family n=2 Tax=Rhodococcus erythropolis RepID=C3JN11_RHOER Length = 297 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 105/297 (35%), Positives = 161/297 (54%), Gaps = 6/297 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 D+ L+AL A + E FE AA+KL IT SAVSQRIK LE G+ L+ RT P R T+ Sbjct: 1 MLDFEQLRALHAAVDEGTFEAAARKLHITPSAVSQRIKGLETSVGRILVQRTKPIRVTDS 60 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPL---LLSLAVNADSLATWLLPALAPVLADSPI 119 G+++L L RQ++ L + + + + +S+AVNADSL+TW+L ALA + + Sbjct: 61 GREVLRLARQIDALSRDTVRELGLENGSGMFARVSIAVNADSLSTWVLGALAEFTQE--V 118 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 + ++D+ T E LR G V+ AV+ + C +LG + Y ++S F ++F + Sbjct: 119 GFDFHLDDQDHTTELLRDGSVMAAVTSVASPIQGCTSSRLGIMRYRPMASAEFCRRWFAD 178 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 GVT +L +AP+V F+ D + +L Q P P H+V SS F R+G + Sbjct: 179 GVTAESLSEAPLVVFNRKDLLQDRYLDQKVGHPADP-PRHLVPSSADFADAVRRGYGWGL 237 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 IP LQ + SG LI P LYW ++ S ++R++++ + H+VL Q Sbjct: 238 IPDLQRGDDDRSGVLIGFDPDFVDDVPLYWQQWKLSSPVLRRISEVVTRRAHEVLHQ 294 >UniRef50_A8TK68 Glycine cleavage system transcriptional activator n=1 Tax=alpha proteobacterium BAL199 RepID=A8TK68_9PROT Length = 306 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 58/301 (19%), Positives = 114/301 (37%), Gaps = 10/301 (3%) Query: 1 MK-RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPR 58 M+ P L+A +A R +AA++L +T +AVS +++ LE G+PL R Sbjct: 1 MRTLPPLTALRAFEATARLGSVTKAAEELSVTHAAVSHQLRTLEEWIGRPLFRREHRRII 60 Query: 59 PTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 P E G LL ++ + + + +L+++ W++P LA A P Sbjct: 61 PNEAGIGLLPVVTDAFDRIAARASELRAQTDRRILTISSAPSVAHRWIVPRLAAFSARHP 120 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 +++++E TR + R G V A+ P +L ++S E++ Sbjct: 121 -EIDVRLEHSTRLIDLAREG-VDVAIRYGSGPWPGLTAHRLMPGYAKPLASPVLLERHGL 178 Query: 179 N----GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQG 234 + S + P + + D+ + + + + + + + +A Sbjct: 179 ATTQLPLPASIIASLP-LQHEESRDLWRQWFADAGLIGADVSSGAVFHEAGVLIDVAMAA 237 Query: 235 TTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 + E +A G L L+ YW + PE+R V A + + + Sbjct: 238 QGVVLGRVALAEGLIAQGVLRILSDRPIGASASYWLCY-PEARRDDPVVAAFRAFVFEEV 296 Query: 295 R 295 Sbjct: 297 G 297 >UniRef50_A3D5N6 Transcriptional regulator, LysR family n=18 Tax=Shewanella RepID=A3D5N6_SHEB5 Length = 311 Score = 245 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 115/310 (37%), Positives = 164/310 (52%), Gaps = 16/310 (5%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 +Y L+AL V+ E GF+RAA+ L ITQSAVSQRI+QLE GQ LL+R+ P T Sbjct: 1 MLEYANLKALAVVVSEGGFDRAAKVLHITQSAVSQRIRQLEEKVGQSLLIRSNPVVATPT 60 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGST--PLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G++LL QV+LLE E + P + +AVNADSLATW LPALA + + Sbjct: 61 GKRLLRHYSQVQLLESELRAEMDADDPNHPTTVRIAVNADSLATWFLPALAGMFSRHAWL 120 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L L V+DE+ T L+ GE VG V+ + C + LG ++YL V++ FA +YF Sbjct: 121 LELIVDDESYTHHLLKNGEAVGCVTTTEVPMAGCSSEFLGTMEYLCVATPEFAARYFGEP 180 Query: 181 --------------VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEA 226 ++++ L KAP V F D +H+ FL Q F++ PG H + SSE+ Sbjct: 181 SDSKSLSDTQPSNDISQAQLAKAPAVVFSTKDKLHEKFLAQYFNMTPGQWWQHTIPSSES 240 Query: 227 FVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDAL 286 F++ ++ HLQ + + G LI+LTP R L+W + +++ V AL Sbjct: 241 FLEAINLSLGYGLVGHLQAKPLIDRGILIELTPERRMRVPLFWQHWNIKAKQTTLVYRAL 300 Query: 287 LDYGHKVLRQ 296 L Q Sbjct: 301 AVTAQHNLLQ 310 >UniRef50_A4BCT6 Glycine cleavage system transcription activator n=1 Tax=Reinekea blandensis MED297 RepID=A4BCT6_9GAMM Length = 312 Score = 245 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 56/296 (18%), Positives = 104/296 (35%), Gaps = 9/296 (3%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQ 62 P + LQA + F++AA++L ++Q+A+SQ+IK LE G L R T + Sbjct: 5 PSLKALQAFRVAGETQSFKQAAERLFVSQAAISQQIKTLEAYLGVRLFHRRTREVALTPE 64 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 GQ+L ++Q + + + S P L+++ + WL+P L + A SP L Sbjct: 65 GQQLYLAVQQGFDQIDRGVRVLMSDSHPSRLNISTTPSFASRWLVPRLGTLQALSP-ELT 123 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 + V V A+ P KL + V + Sbjct: 124 INVSLSQSLVT-FDDSSVDVAIRFGTGQYPELESVKLFDEVLVPVCHPSLLNRSASVS-- 180 Query: 183 RSALLKAPVVAFDHLDDM--HQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + + P++ + D + + V + V+ G ++ Sbjct: 181 -AQVSAMPLLMDEAPDMLTAWARLSDAAGLNLDPASSKFTVTDANMLVEAVLAGQGLSLL 239 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 P I + +L+ P + Y+ AP + R+ L + + Sbjct: 240 PFGLIHPLIERQQLVCPLPVWVKSTFDYY-LVAPAASFKRQKVKMLNSFLQTAFEE 294 >UniRef50_D1SS36 Transcriptional regulator, LysR family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SS36_9BURK Length = 318 Score = 245 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 63/296 (21%), Positives = 106/296 (35%), Gaps = 9/296 (3%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPP 57 M+R P L A + + F AA++LC+TQSA+S+ I LE GQ L +R Sbjct: 1 MRRLCPTISELNAFHSAAKHHAFTMAARELCVTQSAISRHIASLEEYLGQRLFIRKAGGL 60 Query: 58 RPTEQGQKLLALLRQVELLEEEWLGDEQT-GSTPLLLSLAVNADSLATWLLPALAPVLAD 116 T+ G L R E + G + L+ +V A WL P L Sbjct: 61 ELTDAGATYLNATRPAMAALESATAQLMSYGGSGGALNFSVPPTFAAQWLFPRLGHFKRT 120 Query: 117 SPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKY 176 P ++ L + E A+ + PS L + V S + Sbjct: 121 LP-QVALNFVRYQHAHDFAVPHEFDAAIQYGYGNWPSANARYLIGKETSIVCSPQLRDTL 179 Query: 177 FPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 T L A ++ + +++ + GS N ++ A G Sbjct: 180 --RLRTPQDLQHATLLQHIEVPLAWHDWMEAHQCDTAGSRFGPGFNLYSLIIRAAVSGFG 237 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMR--KVTDALLDYG 290 ++P +E EL +G L++ F+ + Y+ + K+ A L++ Sbjct: 238 VGIVPTCLVEDELQAGSLVEPLGRRFESPLGYYLCAPTARTNLSVYKLVAAWLEHC 293 >UniRef50_Q1GMA2 Transcriptional regulator, LysR family n=2 Tax=Rhodobacteraceae RepID=Q1GMA2_SILST Length = 305 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 110/287 (38%), Gaps = 8/287 (2%) Query: 13 DAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQGQKLLALLR 71 AV +GF AA++L +++SAVS+RI Q+EN G L R+ TE G+ + Sbjct: 11 VAVAETQGFAAAARRLGVSKSAVSKRITQIENRLGAQLFHRSTRNVSLTEAGEHFYSHAV 70 Query: 72 QVELLEEEWLGDEQT--GSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVEDET 129 + + +E + L + V + P ++ LA P +++ + + Sbjct: 71 RAQEAAQEAEDSVLALQEAPKGRLRVNVPMAFGRLHVAPLISGFLARYP-GVSIDMVMDD 129 Query: 130 RTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSALLKA 189 R + G A+ A + + K+ AL + V++ + ++ T S L Sbjct: 130 RMVDLFADG-FDLALRGGTLADSALVARKIAALRNVLVAAPTYLARHGA-PQTVSDLRFH 187 Query: 190 PVVAFDHLDDMHQAFLQ-QNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIEKE 248 + + D + + VN+ EA + GT +P + Sbjct: 188 NCLQYSFSRDFQEWVFDCDGKAETFRPSGSYSVNNGEALREAVLGGTGIGRLPTFTAGPD 247 Query: 249 LASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 LASG L+ + P + + PE R + +DY + L Sbjct: 248 LASGRLVRVLPQCQLPSQTLYAIY-PERRYLPTKVRVFIDYLLEHLG 293 >UniRef50_C6DHV2 Transcriptional regulator, ArgP, LysR family n=4 Tax=Pectobacterium RepID=C6DHV2_PECCP Length = 299 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 145/291 (49%), Gaps = 2/291 (0%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQG 63 +Y L+A ++ F+ AA+KL +TQSA+SQRIKQLE+ GQ L+VR P R T G Sbjct: 3 LNYPCLRAFMEIVHSGSFDIAARKLHVTQSAISQRIKQLEDQLGQVLIVRGNPCRATPTG 62 Query: 64 QKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNL 123 Q LL Q+++LE E + T +S+AVNADS+ W L A+ S I L++ Sbjct: 63 QALLRHAEQIDMLESELFSTLEMP-TRQRISVAVNADSIDGWFLDAMENACHQSDILLDI 121 Query: 124 QVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTR 183 VED+ + LR G V+ AVS + + C V+ LG + Y S+ F + YF +G+ Sbjct: 122 LVEDQDHSATLLREGRVMAAVSASPEPIQGCGVEYLGTMRYRAYCSQTFHDTYFADGINA 181 Query: 184 SALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHL 243 +L AP++ F++ D + F++ V S+ AFV +G MIP Sbjct: 182 DSLQNAPLLIFNNKDRLQSLFIESLVPEVIEPPQQF-VPSTAAFVGAIFRGLGWGMIPEH 240 Query: 244 QIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 GEL+ G LYWHR+ S + ++ ++ + L Sbjct: 241 MASSHTEKGELVPFQVGDPVDIRLYWHRWNIRSASLEALSQSVRAAAVRHL 291 >UniRef50_C7RLZ2 Transcriptional regulator, LysR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RLZ2_9PROT Length = 301 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 110/291 (37%), Gaps = 8/291 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 + P L A +AV R F +AA +L +TQSAVS RI QLE+ G LL+R T Sbjct: 12 RLPALSGLLAFEAVARHASFSKAADELSVTQSAVSHRIAQLESRLGVSLLLRVGHLVSLT 71 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G LL +R+ +G G + L++ + WL+ L P Sbjct: 72 SHGGDLLPHVREGLDCLRHGVGKV-AGRRRTTVRLSLAPAIASNWLIQRLGSFQRRHP-D 129 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 ++L + +R +R GE A+ H ++L + V S + + + P Sbjct: 130 ISLDIVVTSRNLN-IRAGEADVAIRFGHGHWEGVDAEELIPVRIFPVCSPAYRKAH-PWL 187 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 S L++A ++ + + + P + + A ++ Sbjct: 188 NQPSDLVRATLLRQSMIP--WRPWFAAAGIDLPEPQDGPSFSEVSLLIDAAEHSQGVGLV 245 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGH 291 +E+++ G L+ L + Y+ A + + + L+ + Sbjct: 246 LSALVEQQVLEGTLVRLFDVEQRSDRAYYLVTATGPARLAE-VETLVAWLR 295 >UniRef50_A9HZ50 Transcriptional regulator, LysR-family n=11 Tax=Burkholderiales RepID=A9HZ50_BORPD Length = 318 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 58/298 (19%), Positives = 96/298 (32%), Gaps = 17/298 (5%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPP 57 M+ P+ LQA +A R F RAA++L +T SAV +++ LE G L R Sbjct: 28 MRNGIPNLSALQAFEASARLGSFSRAAEELSLTHSAVYRQVASLEARLGVQLFTRVRRRI 87 Query: 58 RPTEQGQKLLALLRQVELLEE-EWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLAD 116 TE G + +R E + G + +AV TWL+P LA Sbjct: 88 VLTEHGAEYAGRIRHHLDQIEKDTFGLVSRTGMGRSIHIAVLPTLATTWLIPRLAGFQRQ 147 Query: 117 SPIRLNLQVEDETRTQER-LRRGEVVGAVSIQHQALPSCLVDKLGAL-DYLFVSSKPFAE 174 P ++ V RT + GA+ P L + + V + Sbjct: 148 HP---DITVSLSVRTLPFQFKDQPFDGALYHASGIWPGTQGVLLFPEKELVPVCAPHLPR 204 Query: 175 KYFPNGVTRSALLKAPVVA-FDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQ 233 + L + D Q + P + + + Sbjct: 205 RAEDG------LAGLTHLHLSSRPDAWRQWYGANRQAYGPQAAGGPRYELFTMMLAAVQA 258 Query: 234 GTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGH 291 G ++PH + L +GEL+ P + Y+ P+ + + Sbjct: 259 GLGVGLVPHFLAQPALQAGELVQPVPQVLAVGQGYYF-GYPQRDERSEALRTFEAWLK 315 >UniRef50_A0KIP1 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A0KIP1_AERHH Length = 300 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 100/291 (34%), Gaps = 8/291 (2%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQGQ 64 ++ V+ + F +AA +L I+ + S+ ++QLE LL RT PTE GQ Sbjct: 4 IAAMRTFIKVVECQSFTKAANQLGISVAMTSKLMQQLEESLSTRLLSRTTRQVNPTEAGQ 63 Query: 65 KLLALLRQVELLEEEWLGDEQT--GSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 + + EE L L+V D L PAL P L Sbjct: 64 FYYQRSQALLAELEETHSQLTRNNQQPQGTLKLSVPMDFGYLHLSPALPLFRERYP-DLK 122 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 L++E R + G A+ I + S + L + +S + + T Sbjct: 123 LEIEYSDRRVALVEEG-FDLALRIGNLPDSSLVAKPLAMMRLEVCASPAYLARRGT-PNT 180 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 L + + + L F + L N+ A + A + P Sbjct: 181 PEDLKQHDCLLY-TLTQPDWVFKRDGEQLSVRPQGPLRANNGVALTRAACDHQGIILQPT 239 Query: 243 LQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 + L SG L+ L P + ++ + + P R + +++ + Sbjct: 240 FIVGDALRSGALVSLLPEWEKGQVGLYALY-PHRRFVSAKVRCFIEFVQER 289 >UniRef50_Q0B1H3 Transcriptional regulator, LysR family n=7 Tax=Burkholderiales RepID=Q0B1H3_BURCM Length = 306 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 52/296 (17%), Positives = 94/296 (31%), Gaps = 9/296 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRPT 60 + P L+A +A R AA +L +T SAVS +I+ LE+ G L VR+ + T Sbjct: 18 RLPPLNPLRAFEAAARCGTVSAAADELHVTASAVSHQIRILESTLGVALFVRSKARVKLT 77 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-I 119 +G+ LL + + + + L ++ + WL + L P I Sbjct: 78 PEGEALLEPVGAAFDMIANATVRLDSPAAAGDLVVSTPLSLTSRWLARHIGDFLERYPGI 137 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 L + ++ R +V + + V+ L V S Sbjct: 138 HLKVIPSNDDRET---YSPDVDVCIRYGEGNWRNRRVELLAHPALFPVVSPALMNG-PDA 193 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 L + F +L + + + ++ V+ A G + Sbjct: 194 IRKVQDLAGRTL--FCEHAGSWMRWLAEANADKLPGIRILEIGNAHIGVEAAVHGQGVAL 251 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 L + +L G L+ R Y+ E + A + L Sbjct: 252 GDSLSVRDDLLDGTLVRPFSAAVPSRHAYYLVTRHE-LADSPLVTAFTTWLRACLA 306 >UniRef50_Q2WAU7 Transcriptional regulator n=7 Tax=Proteobacteria RepID=Q2WAU7_MAGSA Length = 309 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 52/298 (17%), Positives = 101/298 (33%), Gaps = 8/298 (2%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQ 62 P + T+ A V F AA++L +++S +S+++ LE G LL RT PTE Sbjct: 3 PRFDTIIAFVRVAETGSFSEAARRLGLSKSMISRQVSALEADLGVRLLHRTTRSLSPTEA 62 Query: 63 GQKLLALLRQVELLEEEWLGDEQT--GSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G+ L +++ +E L ++ L L L P Sbjct: 63 GRAYLERCQRILADLDEANLLVSHLQAVPRGRLRVSAPLSFGIGHLSACLPGFLERYP-E 121 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + L++ R + + G AV I A S +V +L + + +S + E+ Sbjct: 122 IELEMGFTDRHVDLVEEG-WDLAVRIGRLADSSLIVRRLAPVRRMAAASPAYLERRGT-P 179 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNF-DLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 L + F + + ++ + +A G + Sbjct: 180 RRPEELSAHDCLTHGGRVQSEWRFTGDDGKPVQVEVRGRFHADNGDVLRDMALAGLGVVL 239 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 +P + ++ +G L+ L + P R + A +D+ + Sbjct: 240 LPSFFLGDDIRAGRLVPLLEAYVPLDSSL-NAVYPHGRHLSPKVRAFVDHLATSFGPE 296 >UniRef50_Q12AP5 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q12AP5_POLSJ Length = 316 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 50/293 (17%), Positives = 92/293 (31%), Gaps = 9/293 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 K P +++A + R R F RAA +L +T AVS +I+ LE G L R T Sbjct: 3 KLPPLNSIRAFEVAGRLRSFSRAADELSVTHGAVSHQIRSLEEWLGVALFRRLGKSVALT 62 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 +QG+ L + +L + WL P LA + P Sbjct: 63 DQGRLYLDSVSPALAAIASASRSISAHE---VLRVNALPTFTMRWLFPRLAQFRSQHP-H 118 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + +Q+ +L + + + Q + ++ + V S + Sbjct: 119 IEVQISTGLEPMSKLPAN-IDVVIRREPQEVTGLTKVRMVSECAFPVCSPTLLSQLPLAH 177 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 +T L ++ +L + +Q A G M Sbjct: 178 IT--DLGLHTILQCPARPLAWDDWLAFAHHSRVVPAQSLELEHLYFCLQAAIDGIGVAMG 235 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 + ++A+G L+ + Y+ E + V D+ + Sbjct: 236 YSPLVATDIAAGRLVAPFGRVTLDTPGYFLITRTERQH-DPVVKTFCDWLLEQ 287 >UniRef50_B9TDJ5 Glycine cleavage system transcriptional activator, putative n=1 Tax=Ricinus communis RepID=B9TDJ5_RICCO Length = 311 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 52/296 (17%), Positives = 103/296 (34%), Gaps = 7/296 (2%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQ 62 +L+ V R + AA+ L +T AVSQ+IK +E G PL R T + Sbjct: 15 ISLVSLRTFVEVARCGSMKDAARNLGVTPGAVSQQIKIVEERLGAPLFERASKDLHLTAE 74 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGST-PLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G +L+ L ++ + D L + ++WL+P + P + Sbjct: 75 GVRLIEALNMPFQQIQDAVEDFDHRKPKRNTLVVTTVPSFASSWLVPRIGKFAKLYP-DI 133 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 ++V+ + LR A+ P V +L + V+S F + P+ Sbjct: 134 EVKVDSSVALVD-LRHEPFDIAIRHGSGNYPGMSVTQLLTPQLVVVASPEFL-RNIPSIQ 191 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNF-DLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 T + L P++ D + F D + + ++ A ++ Sbjct: 192 TPADCLAHPLLQDRDRVDWPRWFRAHGINDATGRAARGSSFSDDSLMIKAAVASQGLALV 251 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 + E+ ++SG L+ + L ++ + A ++ + Sbjct: 252 RDIYAEEAISSG-LVRIPIAASLGTPLSYYFVTRMQDAQKSRIQAFRNWLLGEIAS 306 >UniRef50_B5WEV2 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. H160 RepID=B5WEV2_9BURK Length = 299 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 56/299 (18%), Positives = 101/299 (33%), Gaps = 10/299 (3%) Query: 1 MK-RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PR 58 MK P ++ + R + F AA +L +TQ AVS+ I+ LE L R Sbjct: 1 MKPLPSLTAVKYFEVSARLQSFTAAAAELHVTQGAVSRMIQTLEEQLEARLFERNGRWIS 60 Query: 59 PTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 T G+ + E ++G+ L+L+VNA + WL+ ++ A P Sbjct: 61 LTPAGKVYHEQITAGLNQIAEASHALRSGADMPALTLSVNAGF-SLWLVHNISDFRAGHP 119 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGA-LDYLFVSSKPFAEKYF 177 + + + + + + P L + + V S K+ Sbjct: 120 -DIQIDIMLH-ELGDIDNDPRIHAHIRYGSPPWPGYDSTSLLDSAEMVVVCSP--HMKHL 175 Query: 178 PNGVTRSALLKAPVVAF-DHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 + LLK P+++F D Q F + N P + A G Sbjct: 176 DQVREPADLLKQPLLSFAGSRHDPWQDFFEHNGLQMPDLGKSPRFLQVLMMREAAISGLG 235 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 ++P ++++ G L+ + P Q Y + + + LR Sbjct: 236 FTVVPLFLFQRDIREGRLVRVLPHTCQTHQGYHFIHR-KDEDLNPRVKTFKKWLLARLR 293 >UniRef50_A4BIQ6 Transcriptional regulator, LysR family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BIQ6_9GAMM Length = 301 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 110/297 (37%), Gaps = 9/297 (3%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQGQ 64 +L V++ F AA +L +T SAVS++I LE+ G LL RT PTE GQ Sbjct: 4 LDSLIIFTTVVKANNFTNAAHQLGLTPSAVSKQISLLEDRLGVRLLNRTTRSVSPTEAGQ 63 Query: 65 KLLALLRQVELLEEEWLGDEQ--TGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 ++ EE + S L ++ L+ A L P +N Sbjct: 64 LFFNRCSRLLEDLEEAEHMVKDLETSPRGTLKISATPTFGRAMLMKIFAQFLEQYP-DVN 122 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 + + + +R G + A+ + + + + V SK + ++ Sbjct: 123 FDLTLADKGLDLVREG-IDLAIHLGSLQDSRLVARPVARQKVILVGSKEYLAEHG-QPEA 180 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLP--PGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + L+ ++ +D ++++ VN + + A G + Sbjct: 181 LNELVNHFILMVSGIDFAEPRWIKRFIKEAGLSNKDRRFTVNDLDTLCEAALNGMGLAAL 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 P I + L SG+L+ + P + H PE+R + + A +D+ ++ Sbjct: 241 PVYMIREHLDSGKLVHILPDIHFPVRTI-HVVYPENRYLSAKSRAFVDFMASYFDEN 296 >UniRef50_D1RNP4 Transcriptional regulatory protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RNP4_SEROD Length = 306 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 57/301 (18%), Positives = 106/301 (35%), Gaps = 9/301 (2%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-P 59 M+ P + ++A AV + F RAAQ L +T SA+S+ +K+LE L+ RT Sbjct: 1 MEEPSLQLVKAFVAVAEHQSFARAAQALNMTPSAISRLVKKLEQQVDMLLINRTTRAMSL 60 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQ--TGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 TE GQ+ + L ++ + + P LA + Sbjct: 61 TEAGQRYFTDCSAALEQLRMAYERMRDEQSQPQGTLRVSTSLSFGRLHVAPHLAAFMVQY 120 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 P +L + + R + + V A+ I S + KL + V+S + +++ Sbjct: 121 P-QLRIDLLMTDRYVDIVAE-RVAVAIRIGRLPDSSLVARKLLNNRRILVASPHYLQQHG 178 Query: 178 PNGVTRSALLKAPVVAFD-HLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 T L + + D + ++ +A Q G Sbjct: 179 T-PTTLEELRQHQCLVSTASHDGENWRLFGPAGATVFQPKGRMRADNGDAVKQFCIDGQG 237 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 + + + + GEL+ L P R + + P + AL+D+ +Q Sbjct: 238 IAFHSAVTMAESIRLGELVQLLPQWTGRETGVYSVYPPG--PVGPAARALIDFLTLRWQQ 295 Query: 297 D 297 + Sbjct: 296 E 296 >UniRef50_D0DDY1 HTH-type transcriptional activator AmpR n=1 Tax=Citreicella sp. SE45 RepID=D0DDY1_9RHOB Length = 316 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 54/308 (17%), Positives = 106/308 (34%), Gaps = 26/308 (8%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPPRPT 60 + P L+A +A R F AA +L +TQ A+S+ ++ LE G L VR+ T Sbjct: 4 RLPSLNALRAFEASARTLSFTAAAAELNVTQGAISRHVRALEAEIGVALFVRSVRRIDLT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 +G L +R E+ +G + +L+++ WL+P L +P Sbjct: 64 HEGHVLFRGVRSALDQLEQSVGRVDRRTAGGVLTISALPTFAMNWLMPRLEDFSQTNPA- 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQAL------------------PSCLVDKLGAL 162 + + + + R + A+ + +L A Sbjct: 123 IEVHLLTGIGAVD-FSREDTDLAIRVGTLGDGDAPANSARIDLKMTERQEGWRAHRLMAD 181 Query: 163 DYLFVSSKPFAEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVN 222 + + V + + + + LL ++ + +L + Sbjct: 182 ELVPVGT----ARVMRGVNSPADLLTRRLLHMATRANAWADYLGATGIPHEVANEGPRFG 237 Query: 223 SSEAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKV 282 ++ AR+G ++P + +E +LASG L+ L Y+ E + V Sbjct: 238 HYFMVIEAARRGDGIAVVPKVLVEDDLASGRLVTLQGDPVPSAGAYYLLCR-EHQWQLPV 296 Query: 283 TDALLDYG 290 A + Sbjct: 297 IKAFRTWI 304 >UniRef50_D0IB86 D-serine dehydratase transcriptional activator n=5 Tax=Vibrionaceae RepID=D0IB86_VIBHO Length = 301 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 99/305 (32%), Gaps = 14/305 (4%) Query: 1 MKRPDYRT-----LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV 55 MK P + L V F RAA++L +TQSAVS RIK+LE L VR Sbjct: 1 MKLPQLSSSLLAGLHCFSVVAETMSFTRAAEELHLTQSAVSHRIKKLEQRLDVTLFVRRP 60 Query: 56 PPR-PTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVL 114 T +G++L ++ + L + ++ WL+P L+ Sbjct: 61 RQLSLTNEGEQLKLVVSEQFSAISLKLLELNRARPVGDFIISAPPTFSQKWLVPRLSLFA 120 Query: 115 ADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAE 174 P L L + + + A+ H + L + V S +AE Sbjct: 121 ESFP-DLTLHLRTRNDLID-FKAEAFDCAIYFGHGRYNGLISHHLMDDAIVPVCSPSYAE 178 Query: 175 KYFPNGVTRSALLKAPVVAFDHL---DDMHQAFLQQNFDLPPGSVPC-HIVNSSEAFVQL 230 + L + ++ + +L H + ++ + Sbjct: 179 -HHALYNAPEKLAQCQLLHDAAPWASASLSDEWLYWANANGLELKGTNHSFDRADLALDA 237 Query: 231 ARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG 290 A G + I++ L +G+L+ + ++ + E A ++ Sbjct: 238 ATHGMGVAIGRMAYIQEYLHNGKLVAPVDKPVKSPYSFYLVYR-EEHQGNAKILAFKEWL 296 Query: 291 HKVLR 295 L Sbjct: 297 ESQLA 301 >UniRef50_Q13NE9 Transcriptional regulator, LysR family n=5 Tax=Betaproteobacteria RepID=Q13NE9_BURXL Length = 304 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 63/303 (20%), Positives = 107/303 (35%), Gaps = 13/303 (4%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 + P + L ++ R F AA++L TQ AVSQR+ QLE G PL R T Sbjct: 6 RLPPMQALTMFESAARLASFTAAARELGSTQPAVSQRVVQLEEALGTPLFERGHRGVTLT 65 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 E G +L +R + + TP L+L+ + WL+P L+ A P Sbjct: 66 EDGLRLFEAVRHALDTIRLATTEIRARRTPQTLTLSTDFGFATYWLMPRLSQFKALMP-D 124 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQ--HQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 +++++ + + A++ H + KL V S F P Sbjct: 125 VDVKIITSQNVFDP-SHDQADIAIAFGDEHADWSARGALKLFPERVTPVCSPAFVAAR-P 182 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQ----AFLQQNFDLPPGSVPCHIVNSSEAFVQLARQG 234 + T S LL+ P++ + + + P + NS A G Sbjct: 183 SLRTPSDLLQLPLLHLEPTQPARWLSWADWFAAHALEAPAAHRGITFNSFTLVAHAAIMG 242 Query: 235 TTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 + +++ LA+G+L++L Y R +A + Sbjct: 243 QGVALGWAPLVDELLATGQLVELFDPPVVTERGYMLV---TQRTATPAVNAFRQWLLDEC 299 Query: 295 RQD 297 D Sbjct: 300 GLD 302 >UniRef50_D0J4E4 Transcriptional regulator, LysR family n=13 Tax=Proteobacteria RepID=D0J4E4_COMTE Length = 321 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 60/313 (19%), Positives = 104/313 (33%), Gaps = 19/313 (6%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR 58 M+R P + L ++ R + +AAQ+L +TQSAVS++I LE G L RT Sbjct: 1 MRRVLPSTQALACFESAARHVSYTKAAQELSLTQSAVSRQIIALEEFVGVALFKRTRHGV 60 Query: 59 -PTEQGQKLLALLRQVEL-LEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLAD 116 T+ G + + LE + L ++LA WLLP L + Sbjct: 61 LLTDAGLHYAKQVGRWLQGLERDTLDLMSHQGEGGPINLAAVPTFATRWLLPRLPQLAQQ 120 Query: 117 SPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQ----ALPSCLVDKLGALDYLFVSSKPF 172 P + + ++ +TR A+ P L + + V S Sbjct: 121 HP-DITVHIDVQTRPF-LFADTVFDAALYAGTPEQVARWPGVQAQWLMDEEVVPVCSPQL 178 Query: 173 AEKYFPNGVTRSAL-------LKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSE 225 R+ L + P++ + + P ++ + Sbjct: 179 LATAQQRDPGRAWLPVGPEVIARLPLLQQSTRPQGWRQWFDAMHVDAPRALDGMRLELFS 238 Query: 226 AFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFA--PESRMMRKVT 283 A QG +IP + IE+E+A G+LI P + Y+ Sbjct: 239 MLAVAASQGLGVALIPPMLIEQEIARGDLIVACPQPLRGNRAYFLVTPELAAEAQPSPAL 298 Query: 284 DALLDYGHKVLRQ 296 + ++ Sbjct: 299 RVFSQWLQHKAQE 311 >UniRef50_A1VE23 Transcriptional regulator, LysR family n=3 Tax=Desulfovibrio vulgaris RepID=A1VE23_DESVV Length = 331 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 104/297 (35%), Gaps = 8/297 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRPTE 61 P L A +A R RAA++LC+TQ+AVSQ++++LE G L R R T+ Sbjct: 5 LPPLNALVAFEAAARLGSITRAARELCVTQAAVSQQVRRLEGHLGLALFARGGQGLRLTD 64 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 +G++ L + T +L++ W++P P + Sbjct: 65 EGRRYLDGIAGPLASIRRATDALMAEDTSGVLTVIAAPSFANRWIVPRFNRFYERHP-DI 123 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +L++ L RG V + P L V S + Sbjct: 124 DLRIGPAP-VAPELGRG-VDIIIYHDIGDRPGTYSMPLMGERIFPVCSPELLDANGGEAA 181 Query: 182 TRSALLKAPVVAFDH-LDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + L ++ + +A+L++ G + S + A G + Sbjct: 182 SF--LRGQLLLRHARDGMGLWEAWLEKAGLGDEGLRFGPRFDFSYLALAAALDGAGVALG 239 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 L + ++LA+G L P YW E+ R A ++ +R+D Sbjct: 240 RTLLVAEDLAAGRLCVPVPLTMVAPRPYWFC-CAEAHAERPRVAAFREWLVDEMRRD 295 >UniRef50_A1WN40 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WN40_VEREI Length = 300 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 60/300 (20%), Positives = 93/300 (31%), Gaps = 8/300 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 + P L+ + V R AA +L +TQSAVS++I LE G LL R T Sbjct: 4 RIPPLNPLRVFEVVARTHNLTAAAAELNVTQSAVSRQIATLETYLGMELLRRERHGVSLT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G L GS L + A WL+P L P Sbjct: 64 RAGHSYAQQLLPAFEQIASATRALVKGSGERALRVRTYTTFAAKWLIPRLGEFRRLHP-G 122 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + + + + + R + AV P L + V S + ++Y PN Sbjct: 123 IEVNITNAVPDVD-FDRDKADVAVQFGAGRWPRTQALFLFGDEIEPVCSPAYLKQYAPNA 181 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQ-NFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 +LL+ ++ + +L SS Q A G + Sbjct: 182 KFPVSLLRQQLLVSHYRRSDWSVWLAATGLAHEARDALQMTFGSSVLTWQAAIDGLGMAI 241 Query: 240 IPHLQIEKELASGELIDLTPG---LFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 + + E G L+ QR Y+ + SR + D+ Q Sbjct: 242 GQNRLLAVEFDKGLLVRPFAQFAKPVQRDQGYYLVWPLRSRE-SRKRALFRDWLLSACAQ 300 >UniRef50_Q0G2U4 Transcriptional regulator, LysR family protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G2U4_9RHIZ Length = 298 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 106/297 (35%), Gaps = 9/297 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 + P L A DA R GF AA++L +TQ A+S++I+ LE G+PL RT T Sbjct: 7 RLPPLDYLVAFDAAARLGGFTLAAEELNLTQGAISRKIRLLEENLGKPLFFRTHRAVHLT 66 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 + G++ + + + + G +++A WLLP L + + P Sbjct: 67 DAGRRYHRTVVHALESIAKASAEVRQGDLRPRVAIAATQSVSTLWLLPRLNRLRSGLP-G 125 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + +++ +E L G + P L V+ + K Sbjct: 126 IEIELTSSDDDRECLESGS-DLIILRGEGRWPGFEGAMLLNESICPVADPDYIAKRSVRE 184 Query: 181 VTRSALLKAPVV-AFDHLDDM--HQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 L ++ H + + +L P + N+ + A QG Sbjct: 185 --PRDFLNCTLIDVASHHTEWLDWKGWLSAAGVDEPIEAERILFNTYALAIDAACQGLGV 242 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 + H I++ + G L+ P + Y+ P R + + + D+ L Sbjct: 243 ALGWHHLIDRHILEGRLVRPLPLTVETNSGYYLL-HPRGRDLSPAAERISDWLRMAL 298 >UniRef50_C6BDS6 Transcriptional regulator, LysR family n=3 Tax=Ralstonia RepID=C6BDS6_RALP1 Length = 308 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 59/296 (19%), Positives = 107/296 (36%), Gaps = 11/296 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLL-VRTVPPRPT 60 + P L+ + R F RAA +LC+T +AVS +IKQLE+ G+ L R T Sbjct: 4 RLPPLNALRVFEVAGRHLSFSRAADELCVTNAAVSHQIKQLEDHLGKKLFARRNNQLTLT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 + G L +R E+ + L +AV A WL+P L P Sbjct: 64 DAGDNYLPRVRDALRALEQATDLLM-DTADAPLRVAVPPTFGAKWLVPRLYRFFNQHP-- 120 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPF-AEKYFPN 179 +++VE T + G+ + + P+ V+ + D+ V + A P Sbjct: 121 -HVRVEVSTADVQD--HGQFDLCIDDRQVNAPNLRVEWFTSTDFFPVCNATLQAAIRMPQ 177 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 + LL + +L + + + + +Q A G + Sbjct: 178 DLAAQTLLHERGGRHLAHHPTWRQWLDEVGVAHIDATRGPAFSEALMALQAAIDGQGVAL 237 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRM---MRKVTDALLDYGHK 292 + +E ++A+G L+ R+ Y+ ++ L+D + Sbjct: 238 GQGILVEYDIAAGRLMRPLATEASLRLSYYLIHPHQAAEHAGFAPFRQWLVDEVAR 293 >UniRef50_Q1GID9 Transcriptional regulator, LysR family n=5 Tax=Rhodobacteraceae RepID=Q1GID9_SILST Length = 295 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 70/296 (23%), Positives = 112/296 (37%), Gaps = 10/296 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P L+A DA R F AAQ+L +T SAVS +++ LE G L VR T Sbjct: 5 LPPLPWLRAFDASARLGNFTLAAQELGLTPSAVSYQVRGLEATLGHKLFVRKQKSLFLTR 64 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IR 120 GQ L ++ + E + S ++L + WL P L+ A P R Sbjct: 65 LGQAYLPVVSKAFGDLEATTSNLFGKSAAQEITLRCLSSLNMLWLAPRLSRFQAQHPDCR 124 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L + T E L ++ + + + V +L + L V + G Sbjct: 125 LRVLSALWGETPEAL---QIDIDIRYGNGSWSDGEVTRLMHHEVLAVCAPALH-----PG 176 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 A+ P++ + D F + PP S P V+ S ++LA +G +I Sbjct: 177 PDPQAIASCPLIEVIGVTDTWHHFFALHGLAPPSSGPALKVDQSLIALELATRGMGVALI 236 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 + ++ L SG L++ T R ++ R AL D+ + Q Sbjct: 237 ARVFAQRYLESGALVEATDLALPAREGHYIVQPEARNHFRPEVAALKDWLLQEAAQ 292 >UniRef50_C6B6V3 Transcriptional regulator, LysR family n=3 Tax=Rhizobiales RepID=C6B6V3_RHILS Length = 296 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 118/291 (40%), Gaps = 9/291 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 R L++ + R F RAAQ+L I+Q+AVS++I++LE + G+ L R T Sbjct: 5 RLPLTALRSFEVAGRLESFTRAAQELFISQAAVSRQIRELETLLGEALFERRHRGVHLTA 64 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G KLLA+L +E L + ++ L+++V A WL+P L P + Sbjct: 65 SGNKLLAILTSSFDRIDESLEEIRSRPARAALTISVEPSFAACWLVPRLPEFRERHP-EI 123 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQH--QALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 ++ ++ ++R E R G+ A+ A P L + + V++ + P Sbjct: 124 DVTIDADSRLVE-FRGGQAEIAIRHSASVTAWPRTESGHLADVRMVPVAAPALLKG-GPA 181 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 +L ++ + D + + + P + +Q +G + Sbjct: 182 IDRPEDMLCHTLLHEETRD-VWFRWFEMAGIAMPEIARGPVYADGGLVMQAVLRGQGIAL 240 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG 290 + + E+E+ +G L+ L+ L YW R+ + + + Sbjct: 241 MDDIFAEEEIRAGRLLRLSD-LAVAHGAYWLVARSFERLAPPAS-FFVRWI 289 >UniRef50_C2HVP7 Transcriptional regulator LysR family n=1 Tax=Vibrio cholerae bv. albensis VL426 RepID=C2HVP7_VIBCH Length = 299 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 108/297 (36%), Gaps = 10/297 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPT 60 K P L+A +A R F +AA +L +TQ+A+SQ++K LE+ L VR R T Sbjct: 5 KLPPLNALRAFEASARLGSFTKAADELNVTQAAISQQVKILEHHLRTELFVREAKGIRLT 64 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 E GQ ++ Q + LS+ V+ +L P LA L D P R Sbjct: 65 EAGQSYQPVISQSFHTLRLGTEELFGERGKNTLSIRVSNSFAEHFLAPRLASFLQDYP-R 123 Query: 121 LNLQVEDETRT-QERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 +++ + L + + V++L + V S K+ P Sbjct: 124 FRVRLYTSPWIPADHLA--HADIEIYNGYGDWDGLHVERLTHECWQVVCSPQAILKHGP- 180 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 LL P + + + Q P + C +++ ++ +Q + Sbjct: 181 VTDAEQLLNWPRASVIGYRETWLQWFHQQGVKPIPTSACLEFDTTTVALRAIKQSD-FAL 239 Query: 240 IPHLQIEKE-LASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 + + E L GEL+ P ++ + + R A D+ + + Sbjct: 240 LTRSFVAAEPLRHGELVLAHPATMSTSGGHYMGWRKGDQ--RPKVLAFCDWIRREIA 294 >UniRef50_A0KD65 Transcriptional regulator, LysR family n=2 Tax=Burkholderia cenocepacia RepID=A0KD65_BURCH Length = 306 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 56/302 (18%), Positives = 109/302 (36%), Gaps = 15/302 (4%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P +++A +A R GF RA +LC+T AV +++ LE G PL +R TE Sbjct: 5 LPPLLSVRAFEAAARHGGFARAGDELCVTSGAVGHQVRLLEEWLGTPLFMRGARSVQLTE 64 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G++ + ++ E D + + +++ + WL+P L P + Sbjct: 65 IGRRYFLEIERLMDELERASLDIRQAADSPEVTVTAMPSFVTRWLMPRLGEFRRLHP-DI 123 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +++ + R V A+ + P + +KL + +L V + Sbjct: 124 EVRLLASVPAVD-FSRERVDVAIRLGVGPYPGLIAEKLMSETFLAVGQPSICK----PLR 178 Query: 182 TRSALLKAPVVAF-------DHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQG 234 T LL+A ++ + +D M + +Q P + + + A G Sbjct: 179 TVDDLLRATLLHDEYEARIPEQVDWMRWSRMQDVQAGPARLRQGPSFSHTYLTLDAAIAG 238 Query: 235 TTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 + + + G L+ + PG + +H + R DA + Sbjct: 239 QGVAVASDVLAADAVRQG-LLAIAPGKPVQGPYSYHLLTTRAAAARPQIDAFCSWLRSAA 297 Query: 295 RQ 296 R Sbjct: 298 RS 299 >UniRef50_Q28S71 Transcriptional regulator, LysR family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28S71_JANSC Length = 302 Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats. Identities = 63/303 (20%), Positives = 105/303 (34%), Gaps = 11/303 (3%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-P 59 MKR D + L AV+ F A L +T SA+SQ +KQLE G PLL RT Sbjct: 1 MKRTDLDGILPLLAVVEHGSFRAGAAALGVTPSAISQSVKQLEERIGVPLLTRTTRSVGL 60 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQ--TGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 T+ GQ + + L LL ++ + L P L + Sbjct: 61 TQAGQLFVDRASPAICEVRDALASISEFGQRPSGLLRISAPRLAYPVALAPVLPEFMKTY 120 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGAL-DYLFVSSKPFAEKY 176 P + +++ E + ++ + + + L V+S + + + Sbjct: 121 P-EIEVEISLEDTLTDIVQS-RFDAGIRLGATVEADMVARALTPPSRMCVVASPDYLDAH 178 Query: 177 FPNGVTRSALLKAPVVAF---DHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQ 233 T LL + F H FL++ D IVN + A + A Sbjct: 179 G-VPETPDDLLSHRCINFRRPTRKTVYHWRFLERGEDRHIPVPGVMIVNDTAAKIDAALN 237 Query: 234 GTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 G +E+ + +G LI + G + H + P + + +D+ Sbjct: 238 GFGLAYELAPVVEQHVKAGRLISVLEGYLPEVPGF-HIYYPGRKQIMLKLRVFIDFAAAE 296 Query: 294 LRQ 296 LR Sbjct: 297 LRS 299 >UniRef50_C9P538 Transcriptional regulator n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P538_VIBME Length = 305 Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats. Identities = 63/295 (21%), Positives = 105/295 (35%), Gaps = 8/295 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTE 61 P L+A +A R F +AA +L +TQ+AVSQ++K LE+ L +R R T+ Sbjct: 4 LPPLNALRAFEASARLGSFTKAADELNVTQAAVSQQVKILEHHLKATLFIREAKGIRLTD 63 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 GQ +L QV D LSL V+ +L L L D P R Sbjct: 64 AGQSYQPVLSQVFHSLRIGTEDLFGERGNNTLSLRVSNTFAEHFLAARLPNFLKDYP-RF 122 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +++ +Q R + + V++L + V A ++ N Sbjct: 123 RVRLYTSPWSQSDQRSQP-DIEIYNGYGDWDGRQVERLTHEYWQVVCRPQ-AINHYGNVT 180 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI- 240 LL P A + + Q PC +++ +Q R G ++ Sbjct: 181 CAKQLLDWPRAAIIGYRETWLDWFSQQGITEIADAPCLEFDTTTLAIQAVRHGD-IALLT 239 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 + + LA G L+ P ++ + R A D+ + + Sbjct: 240 RNFVVADPLAKGSLVLAHPASMTTTGGHYLVWKKGDH--RPKVLAFCDWIRREVA 292 >UniRef50_Q5LWI7 Transcriptional regulator, LysR family n=1 Tax=Ruegeria pomeroyi RepID=Q5LWI7_SILPO Length = 302 Score = 242 bits (620), Expect = 8e-63, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 98/295 (33%), Gaps = 9/295 (3%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-P 59 M+ P L+A +A R G+ AA++LC+T+ AVS+ IK LE+ G L R Sbjct: 1 MRLPPLNALRAFEAAARHNGYIAAAEELCVTRGAVSRHIKLLEDHLGVTLFHRNHRGVEL 60 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 T G++LL +L + EQ + + + WL P L A P Sbjct: 61 TAAGRQLLPVLTETFARI--AREAEQISAMTRDVRIICPPALSIRWLFPRLEEFQAAHP- 117 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQH--QALPSCLVDKLGALDYLFVSSKPFAEKYF 177 + +++ E + E VS++H L + S + Sbjct: 118 DIRVRLTTEFYGAKGFDDTEHDLGVSVEHVSGRGAGIASMPLFPMVLSPACSPALLRQR- 176 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 + L + ++ +L + + + + A G Sbjct: 177 -PLSAPADLARMTLLHESPQRRDWAHWLSSFGVRGVDAGSGPTFPNLDMAARAATMGAGV 235 Query: 238 CMIPHLQIEKELASGELIDLTPGLF-QRRMLYWHRFAPESRMMRKVTDALLDYGH 291 M ++EL +G L+ P + + +R A D+ Sbjct: 236 VMADLALCQEELRAGTLVLPFPEMTCTTPQGGYVLLGARARWDEPHLRAFRDWAA 290 >UniRef50_B5WB35 Transcriptional regulator, LysR family n=2 Tax=Burkholderia RepID=B5WB35_9BURK Length = 315 Score = 242 bits (620), Expect = 8e-63, Method: Composition-based stats. Identities = 57/288 (19%), Positives = 101/288 (35%), Gaps = 10/288 (3%) Query: 12 LDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQGQKLLALL 70 +A R + F+ AA +L +T SAVS I LE G L VR T G L+ + Sbjct: 14 FEAAGRHQSFKLAAAELNVTPSAVSHGIVGLEEALGVALFVREPRGISLTAIGADYLSYV 73 Query: 71 RQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVEDETR 130 + L ++L+ + WLLP LA A P +N+ V+ R Sbjct: 74 SEAFSLIAIGTQRLPNHRADRPIALSCAPTFASRWLLPRLAGFRARWP-NVNVSVDTSHR 132 Query: 131 TQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSALLKAP 190 G A+ + + +L ++ V S + + S L +A Sbjct: 133 QVGFPVDG-FDFAIRMSRAPVAGTAWTRLFGERFVPVCSPAYLATLRDDRGDLS-LRRAT 190 Query: 191 VVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIEKELA 250 ++ + + Q +L + V++ + + A G + ++ +LA Sbjct: 191 LIHVNAASEDWQTWLDATSTDGVDTGGGLRVDTIQLAFEAASMGLGVALGRKPLVDSDLA 250 Query: 251 SGELIDLTPGLFQRRMLYWHRFA------PESRMMRKVTDALLDYGHK 292 SG L++ + YW A + L+D + Sbjct: 251 SGALVEACAQVVAAGTAYWLVSAENADSGVRRPELDDFKHWLVDEAQR 298 >UniRef50_B9JHJ0 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JHJ0_AGRRK Length = 291 Score = 242 bits (620), Expect = 8e-63, Method: Composition-based stats. Identities = 97/294 (32%), Positives = 147/294 (50%), Gaps = 6/294 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 DY+ L+AL V+R+ FERAA+ L IT SA+SQRIK LE G L+VR P PT Sbjct: 1 MMDYQQLEALVEVLRQGSFERAARTLNITPSAISQRIKTLEERVGAVLIVRGQPCLPTSV 60 Query: 63 GQKLLALLRQVELLEEEWLGDEQTG--STPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G +LL +V LLE+E + + S + + +AVNADSL TW A+ Sbjct: 61 GTRLLHHAERVHLLEQEVRNEIEGATVSEKITVRIAVNADSLVTWFCEAMKAFDDVY--- 117 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 +++ ED+ T E L G+V AVS + C KLG + Y V++ F EK FP+G Sbjct: 118 IHVLREDQEHTFELLWSGDVAAAVSSTDVEVAGCDRRKLGHMRYRAVATPQFIEKNFPDG 177 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 VT +AL +A + FD DD++ + + F +P H + S+ +Q G + Sbjct: 178 VTPAALSQAVGLRFDTKDDLNDQWTENYFGKSC-PIPTHWLPSTHGILQGTLAGLGWGIN 236 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 P + + + L++G L +L LYW+ ++ +T ++ L Sbjct: 237 PEILVREHLSTGILQELISDAPVDVPLYWYHSRVAQPLLSSLTASVEKICRAFL 290 >UniRef50_B2TDK7 Transcriptional regulator, LysR family n=6 Tax=Proteobacteria RepID=B2TDK7_BURPP Length = 312 Score = 242 bits (620), Expect = 8e-63, Method: Composition-based stats. Identities = 51/283 (18%), Positives = 95/283 (33%), Gaps = 7/283 (2%) Query: 12 LDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTEQGQKLLALL 70 +A R + F+ AA +L +T SA+S I LE G L R T G L+ + Sbjct: 14 FEAAGRHQSFKLAAAELNVTPSAISHGIVGLEQALGVELFAREPRGISLTASGADYLSYV 73 Query: 71 RQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVEDETR 130 + L ++L+ + WLLP LA A P +N+ V+ R Sbjct: 74 SEAFSLIAIGTQRLPNHRADRPIALSCAPTFASRWLLPRLAGFRARWP-NVNVSVDTSHR 132 Query: 131 TQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSALLKAP 190 G AV + + +L ++ V S + + L +A Sbjct: 133 QVGFPVDG-FDFAVRMSRAPVAGTAWTRLFGERFVPVCSPAYLANLRDEQGN-ADLRRAT 190 Query: 191 VVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIEKELA 250 ++ + + QA+ + V++ + + A G + +++++ Sbjct: 191 LIHVNAASEDWQAWFDATGTEGIDTAAGLRVDTIQLAFEAAAMGLGVALGRRPLVDRDID 250 Query: 251 SGELIDLTPGLFQRRMLYWHRFAP---ESRMMRKVTDALLDYG 290 +G L+ YW A + L+ Sbjct: 251 NGTLVQACAATIASTTAYWLVSAENADRRPELFDFKRWLVSEA 293 >UniRef50_A9DBL2 Putative transcription regulator protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DBL2_9RHIZ Length = 325 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 56/288 (19%), Positives = 101/288 (35%), Gaps = 3/288 (1%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQ 62 P+ +AV R AA++L I+ SAVSQ++K LE G L R T + Sbjct: 5 PNLNAYLYFEAVARRGTITHAAEELSISPSAVSQQVKLLEQRLGVKLFRRDGRLLSLTLE 64 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 G++L + + + L+L V WL P LA +A+ P + Sbjct: 65 GEQLFQVSTTALRMLRDTGRHLGKTRETHRLNLRVTPSFGVRWLAPRLAGFVAEHP-DWD 123 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 L+V+ R + + + + L + S + + Sbjct: 124 LRVDAAPDPTN-FEREVMDLDIRYGNGDWQGLHARPVLHDHVLPLCSPRYLSGLKASDNP 182 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 + L +A ++ +L N + +++ S +QLA G + Sbjct: 183 GALLDQARLIDSARALCQWDFWLYHNGIETSSNRKSILMDRSSIALQLALDGAGIVLESL 242 Query: 243 LQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG 290 E+A+G L+ + P L + P + R+ LD+ Sbjct: 243 ALALPEVANGRLVPVLPKLPVLTFPSYWTICPARYLNRRAVHLFLDWL 290 >UniRef50_A1VJM2 Transcriptional regulator, LysR family n=16 Tax=Burkholderiales RepID=A1VJM2_POLNA Length = 347 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 105/298 (35%), Gaps = 13/298 (4%) Query: 8 TLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQGQKL 66 L+A +AV R F A+++L +TQSAVS++I+ LE G L +R T G +L Sbjct: 39 QLRAFEAVARHLNFRAASEELSLTQSAVSRQIQSLEEDVGVSLFLRHTRAVELTSAGAQL 98 Query: 67 LALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVE 126 L + + + + + ++++ A + WL+P L + P ++++++ Sbjct: 99 LRAVLPSLERIDGVVRMIRQSAGRKSVAISTWASFASMWLIPRLEAFQREHP-DIDIRID 157 Query: 127 DETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSAL 186 + L +V A+ A +L V S K P L Sbjct: 158 ATDTPVD-LETTDVDLALRYSMPASVPAQARRLFGEQLTPVISPWLL-KSGPRLQNAQDL 215 Query: 187 LKAPVV-----AFDHLDDM--HQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 + +V + Q + N + Q A G + Sbjct: 216 ARFALVEASDAHRTQHMEWLSWQRWFDMQGLRRFEPKRWLYFNYAHQIAQAALTGQGVAL 275 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRM-LYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 I + LASG+L+++ P YW P + R A + Q Sbjct: 276 ARMPLIAESLASGDLVEVLPDRRMDSPMAYWLIVGPRNAA-RPEVQAFCSWIEAQAAQ 332 >UniRef50_C6QF64 Transcriptional regulator, LysR family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QF64_9RHIZ Length = 305 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 109/294 (37%), Gaps = 8/294 (2%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRPTEQGQ 64 + A V+ + AA++L +T+SAVS+ + +LE G LL RT PTE G Sbjct: 4 LEAMNAFAKVVASGSYAEAARRLNLTRSAVSKAVMELEQALGARLLDRTTRRVTPTEAGL 63 Query: 65 KLLALLRQVELLEEEWLGDEQ--TGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 + +E +L + +L A+A + L Sbjct: 64 AYYERCLAILAQVDETEAQISRLHDEPKGVLKVNAPMSFGTLYLGDAVADFMIRY-SDLK 122 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 +++ R + L G V V I S + ++ + V+S + + + + Sbjct: 123 VELTLTDRFIDPLEEG-VDVTVRIGAMVDSSLIARRISPARIVLVASPDYLKAHGT-PQS 180 Query: 183 RSALLKAPVVAFDHLDDMHQAFL-QQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 S L + +++ H+ M + L + + C N+ + + A +G ++P Sbjct: 181 PSDLAEHRCLSYGHMTSMQRWHLTDKGKPVSVAIGACLSSNNGDVLREAALKGIGIALLP 240 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 K++A+ L + P + +AP +R + T +D+ Sbjct: 241 TFIAGKDIAAKRLQIVLPENQPDDLTIHALYAP-NRYLAAKTRVFIDFLVDRFG 293 >UniRef50_A8I6W2 Transcriptional regulator n=4 Tax=Proteobacteria RepID=A8I6W2_AZOC5 Length = 315 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 56/287 (19%), Positives = 100/287 (34%), Gaps = 9/287 (3%) Query: 10 QALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQGQKLLA 68 + AV+ F AA++L + S+ + +LE G LL RT PTE GQ Sbjct: 20 RMFVAVLDTGSFSAAAERLGTSSGQASKLVSRLETELGVQLLKRTTRALSPTEVGQAYYE 79 Query: 69 LLRQVELLEEEWLGDEQ--TGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVE 126 ++ + E + +G+ L L+ L+P L P ++ L V Sbjct: 80 RIKPLLDEFEALDASVRNASGAPAGRLRLSAPMSFGHIQLMPLLLDFARAFP-QIQLNVS 138 Query: 127 DETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSAL 186 R + G A+ I S + KL ++++S + + T L Sbjct: 139 FSDRLVNVVDEG-FDAAIRIGSPRDSSLIARKLCDSQIMWLASPAYLASHGT-PQTPQDL 196 Query: 187 LKAPVVAFDHLDDMHQAFLQ--QNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQ 244 ++ + D+ + Q +S EA + A G +P Sbjct: 197 VRHACIIDDNFPEPLVWRFQTPDGVGDAVTVSGRMRFSSGEACLAAAEAGLGIARMPTFI 256 Query: 245 IEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGH 291 +L +G ++ L L + + P R + AL+D+ Sbjct: 257 AGPKLKAGTVVPLFRDLMPPARGVYALY-PPGRHLAVKVRALVDFLA 302 >UniRef50_B9B8W0 Transcriptional regulator, LysR family n=3 Tax=Burkholderia RepID=B9B8W0_9BURK Length = 318 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 95/295 (32%), Positives = 146/295 (49%), Gaps = 2/295 (0%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 D + L+ +V++ + F RAA L I+ AVSQRIK LE G LL+R PT+ Sbjct: 10 LLDRQQLETFASVVQHKHFRRAAAALNISPGAVSQRIKALEESVGAMLLMREPTIVPTQA 69 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGS-TPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G +L + V LLE + L + P+ ++AVNADSLATW P + + L Sbjct: 70 GDAILRYIMAVRLLEYDALQRIKPDRFPPMDFAIAVNADSLATWFEPVAWQLARQH-VSL 128 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 + V+D+ T L RG+V G +S Q Q LP + + +G + Y V+ FA ++F NG Sbjct: 129 EIIVDDQDHTLTSLARGDVKGCISTQRQPLPGFVAEFVGGMRYRCVAPPEFAGRHFANGF 188 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 + LK + F+ D +H +FL+ F + G H S A + G ++P Sbjct: 189 MLADALKVTAILFNRKDALHDSFLKSFFGVAVGKYVKHYFPSPGALLNGILNGLGYGLVP 248 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 +Q + +ASG+L+DL P LYWH + E K++ ++ + L Q Sbjct: 249 AMQADPLIASGQLVDLAPEQSLVVDLYWHHWESEPPPAAKISQLVMAHARHCLVQ 303 >UniRef50_B5ZZ47 Transcriptional regulator, LysR family n=4 Tax=Rhizobium RepID=B5ZZ47_RHILW Length = 312 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 50/298 (16%), Positives = 104/298 (34%), Gaps = 8/298 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRPTE 61 P L +A R F AA +L +T AVS++IK +E G L +RT T Sbjct: 8 LPSLTALATFEASARHGNFTLAAAELNVTTGAVSRQIKSIEQELGVALFLRTGKGVMLTA 67 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 + L L E + + G++ +++A + WL+P + + Sbjct: 68 PAEDLYRALATGFARASEVVNSIKQGNSARNVTIACSDVFGTMWLIPRMPDFWRRF-TDI 126 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 ++ + R ++ + + L V S FAEK+ G Sbjct: 127 SVDHLIGDNFKT-FRPSQLELRIRYGSGKWIDETAEFLFDDCLYPVCSPGFAEKH--AGA 183 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQ--QNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 + + L P++ + ++ + + +P + +Q A + Sbjct: 184 SAADLADLPLLNVEWVEPGWTGWEEVLARGGVPYHAASGRRFGKFSVALQAAMADQGLVV 243 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 H + + G+L+ T + Y+ + +R + +L D+ + ++ Sbjct: 244 GWHRLVGPLVEKGDLVRFTDLVVPDPGAYYLTWN-STRALPAAALSLRDWIRMLAEEE 300 >UniRef50_A3SQ37 Probable transcription regulator protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SQ37_9RHOB Length = 300 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 56/296 (18%), Positives = 108/296 (36%), Gaps = 8/296 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P L++ +A R + F AA++L +TQ A+S+++++LE + G L R T Sbjct: 7 LPSLPVLRSFEAAARHQSFTMAAEELGLTQGAISRQVRELEELIGARLFARVGRSVQLTP 66 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLL-LSLAVNADSLATWLLPALAPVLADSPIR 120 G+ L + + LS+AV + WL+P L A P Sbjct: 67 AGRGFARDLGGDLARLRQSVSRAVAAGDGGSILSVAVLPTFGSRWLMPRLPDFCARHP-D 125 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + L + L+ A+ P + L + V++ F E++ Sbjct: 126 IQLSFSSRGEPFD-LQEARCDVAIHFGRADWPGAQLTPLCPENLRAVAAPAFIERHG--I 182 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + L +AP++ D F + + + + A QG ++ Sbjct: 183 RQPADLCQAPLLQLSSRPDAWAGFFAAQAQDATRAGAGMLFDQFSLMISAALQGLGAALL 242 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 P IE EL+ G L + + + +H P R+ + + + + + + Sbjct: 243 PVYLIEDELSQGSLCAVA-AVGSPQEASYHIATPLGGTSREAA-SFVSWLRRQVPR 296 >UniRef50_C8QG37 Transcriptional regulator, LysR family n=1 Tax=Pantoea sp. At-9b RepID=C8QG37_9ENTR Length = 304 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 106/292 (36%), Gaps = 6/292 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPPRPTE 61 P TL A + V R RAA++L +TQSA S++I QLE M G L RT T Sbjct: 6 LPPLNTLIAFECVARYGNISRAAEELNLTQSATSRQILQLEEMLGCKLFTRTQRRVLLTP 65 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 +G+ +RQ + + +++A + + WL P L+ + + P L Sbjct: 66 RGEAYATQVRQQLSALSHATAEVMGWNGLPQVTIACTSAMGSLWLAPRLSALHGELP-DL 124 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 ++++ + R E A+ +A P L + + F + N Sbjct: 125 QIRMKISDSFADM-RSSEFDLAIFYLREAPPGFQATPLFDEICYPMCAPEFRARLEENAS 183 Query: 182 TRSALLKAPVVAFDHLDDM--HQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 S L ++ D + + L N+ VQ A +G + Sbjct: 184 AESLLHHMLLIQDDPQREWTGWSDWFASQDVLSFVPRQTWRANNYPFLVQAAVRGDGILL 243 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGH 291 ++ L GEL+ G + P+ R ++ + ++ + Sbjct: 244 GWEGLVQDHLNRGELVPAHAGKLAANGKCFLLI-PQDRYLKPIVRHVISWLQ 294 >UniRef50_Q0K5L3 Transcriptional regulator, LysR-family n=5 Tax=Burkholderiales RepID=Q0K5L3_RALEH Length = 304 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 105/296 (35%), Gaps = 7/296 (2%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPPRPTEQGQ 64 L A R F RAA +LC+TQ A+S+ I +LE FGQPLL R T+ G+ Sbjct: 1 MSELHAFATAARLGSFTRAADELCVTQGAISRAIARLEAHFGQPLLQRNAHRLVLTDAGR 60 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQ 124 KLL + + E + G+ L+L+V + WL+P L P + L Sbjct: 61 KLLEAVAEPLATIEHASATLRAGNRRHHLTLSVVPTLASVWLVPRLPDFHRRHP-EIRLD 119 Query: 125 VEDETRTQERLRRGEVVGAVSIQH-QALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV-- 181 R E L A+ P D + + + V A G Sbjct: 120 FVPYQR-DEDLSGPSPDAAILAGEAGKWPGLQADYVVGRELVPVCHPDRARARREAGRWQ 178 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 + + LL P++ Q +LQ + +Q R ++ Sbjct: 179 SPAELLDEPLLYHTTAPANWQNWLQAAGVPNAAPRLSTAFDQVSILIQAVRADIGVAVLQ 238 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 + E+A+G + + Y+ AP+ R + D+ + +D Sbjct: 239 RCLVRDEIAAGRVTAPFDLPITLQRGYFLC-APKERRDHPALNCFRDWLLETAAKD 293 >UniRef50_A3X5F2 Probable transcriptional regulator n=1 Tax=Roseobacter sp. MED193 RepID=A3X5F2_9RHOB Length = 299 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 67/300 (22%), Positives = 109/300 (36%), Gaps = 8/300 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 D L+ V + F A+ T SAVS++I +LE LL RT + TE Sbjct: 1 MEDLNLLRLFVLVADQGSFSAVARSTRATPSAVSRQISRLEENLNTRLLQRTTRRQELTE 60 Query: 62 QGQKLLALLRQVELLEEEWLGDEQT--GSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 GQ L+ RQ+ + + +L + AD T L P L L P Sbjct: 61 AGQVYLSHARQIIEDVDTARQAVSRLSNAPSGVLRITAEADLALTLLSPVLPEFLERYP- 119 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 L +Q+ + ++ + RG + A+ + H + S + +L L V+S + E+ P Sbjct: 120 DLRVQLHTSSTMEDLVSRG-IDVAIRVGHLSDSSLIAKRLTMSRSLLVASPEYLEQDIPP 178 Query: 180 GVTRSALLKAPVVAFDHLDDM-HQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 L ++F D+ F +S + A+ G Sbjct: 179 QQ-PEDLRNHSCLSFKVDTDLVTWRFKSGEEVTNVPVTGPIQASSLVLLKEAAKSGLGIA 237 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLY-WHRFAPESRMMRKVTDALLDYGHKVLRQD 297 M+P + EL SG L+ + PG P R + L+D+ + D Sbjct: 238 MLPVWMLRAELKSGTLVPVLPGFPLDPAATPISAVYPSGRNLASKVRVLIDFLAIRIEHD 297 >UniRef50_P24734 HTH-type transcriptional activator ampR n=112 Tax=Bacteria RepID=AMPR_PSEAE Length = 296 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 64/295 (21%), Positives = 105/295 (35%), Gaps = 11/295 (3%) Query: 1 MKRP--DYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP- 57 M RP L+A +A R F RAA +LC+TQ+AVS ++K LE G L R Sbjct: 1 MVRPHLPLNALRAFEASARHLSFTRAAIELCVTQAAVSHQVKSLEERLGVALFKRLPRGL 60 Query: 58 RPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 T +G+ LL +L L + G +L++ WLLP L A Sbjct: 61 MLTHEGESLLPVLCDSFDRIAGLLERFEGGHYRDVLTVGAVGTFTVGWLLPRLEDFQARH 120 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 P ++L++ + G + A+ A L + A + Sbjct: 121 PF-IDLRLSTHNNRVDIAAEG-LDYAIRFGGGAWHGTEALALFEAPLTVLCCPEVAAQLH 178 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 + + LL+ ++ D+ F + ++S A ++ ARQG Sbjct: 179 ----SPADLLQHTLLRSYRADEWPLWFQAAGLPAHAPLTRSIVFDTSLAMLEAARQGVGV 234 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHK 292 + P ++LAS + YW +SR A + + Sbjct: 235 ALAPAAMFARQLASESIRRPF-ATEVSTGSYW-LTRLQSRGETSAMLAFRGWLLE 287 >UniRef50_B0UR60 Transcriptional regulator, LysR family n=5 Tax=Proteobacteria RepID=B0UR60_METS4 Length = 294 Score = 240 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 54/292 (18%), Positives = 97/292 (33%), Gaps = 7/292 (2%) Query: 7 RTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQGQK 65 R ++A A +R AA +L + + V Q+I LE G LL RT + T+ G Sbjct: 5 RCMRAFVATVRAGSMSAAAAELGQSPAMVGQQIAALEERLGTRLLNRTTRRQSLTDFGAS 64 Query: 66 LLALLRQVELLEEEW--LGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNL 123 + R + + Q L + A L+PAL +P + L Sbjct: 65 YVEQCRDILERIALAQEAAELQQTRVQGRLRITAPTTFGAEALMPALGGYRLTAP-DVEL 123 Query: 124 QVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTR 183 + R + + G A I + + L + ++ + + + Sbjct: 124 DITLSDRNVDLVEEG-FDLAFRIGAIQDSAMIARPLAPYRMVVCAAPDYLARRGT-PIHP 181 Query: 184 SALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHL 243 L +AF F + + + VNS +A AR G M P + Sbjct: 182 DDLEGHEAIAFTPSARSPWTFARGDDERAVTPPRMITVNSGQAVRAAARAGLGIIMQPEI 241 Query: 244 QIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 + +++ +G L+ L P W + R M + + + Sbjct: 242 LVRRDMETGCLVRLFPEWRLGDRPMWLLYH-RDRRMTPRLRSFISFATAAFG 292 >UniRef50_A0NTX9 LysR family transcriptional regulatory protein n=3 Tax=Proteobacteria RepID=A0NTX9_9RHOB Length = 342 Score = 240 bits (615), Expect = 4e-62, Method: Composition-based stats. Identities = 59/288 (20%), Positives = 104/288 (36%), Gaps = 9/288 (3%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQGQ 64 +L ++ F AA+ L I+Q AVSQ+++ LE+ G LL RT TE G+ Sbjct: 19 LSSLSGFVQAVKFGSFSAAAKHLGISQPAVSQQVRALEDELGIRLLNRTTRQLSLTEAGE 78 Query: 65 KLLALLRQVELLEEEWLGDEQT--GSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 + A R + E Q+ LS+ + T L L D P + Sbjct: 79 RYYAYARDILERLAEADRSVQSEEAQMSGPLSVGLPLGFAETVLSDFLIRFKLDHP-GIL 137 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 L V + + +++ + A+ + +V +LG V+S + +K Sbjct: 138 LDVSLSDQFVDVIQQ-RLDVAIRMGDIEDDRLIVRRLGLAQRCLVASPDYLDKRG-RPAH 195 Query: 183 RSALLKAP-VVAFDHLDDMHQAFLQQNFD-LPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 L ++ + F+ + L P +VN+S + A G + Sbjct: 196 PDDLKDHDYLLYKNISTGTRVPFISPVGEKLSVKISPTMLVNNSSTLRRAAMAGLGIALS 255 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLD 288 I+ L +G+L + P H P +R + +D Sbjct: 256 NRWLIDPFLRTGDLEVVLPQWQYPPHPV-HAVYPSNRFIPLKVRRFVD 302 >UniRef50_B9JYX8 Transcriptional regulator LysR family n=9 Tax=Alphaproteobacteria RepID=B9JYX8_AGRVS Length = 301 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 154/288 (53%), Gaps = 5/288 (1%) Query: 8 TLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLL 67 L AL AV+R FE+AA++L +TQSA+SQRIK LE G L++R P PT G +L Sbjct: 7 QLSALVAVLRSGSFEKAARQLGVTQSAISQRIKLLEERSGTALIIRGQPCLPTSAGARLC 66 Query: 68 ALLRQVELLEEEWLGDEQ-TGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVE 126 +V LLE E +GD + + + LA+NADSLATW +PA+A V + +L ++ Sbjct: 67 RHAEEVALLEREVIGDLGLAQAAQVTVRLAINADSLATWFVPAMAAV---EGLLFDLVLD 123 Query: 127 DETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSAL 186 D+ + + LRRGEV AV+ + C LG L Y +S F ++FP GVT AL Sbjct: 124 DQDHSADWLRRGEVRAAVTSLAAPVQGCDCRPLGLLTYRATASPDFVARWFPQGVTAEAL 183 Query: 187 LKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIE 246 AP + F+ D + A+++Q PCH + SS+AF+ +R G M P + + Sbjct: 184 AVAPCLTFNAKDGLQTAWIEQVAGCRLSP-PCHWLPSSQAFIDASRLGLGWGMNPAVSVA 242 Query: 247 KELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 +A G L+DL P LYWH R + +T ++L + L Sbjct: 243 PLIAEGVLVDLRPDQPLAVPLYWHWSRALGRALDPLTASVLAAARQCL 290 >UniRef50_Q0KB44 Transcriptional regulator, LysR-family n=2 Tax=Cupriavidus RepID=Q0KB44_RALEH Length = 309 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 108/297 (36%), Gaps = 7/297 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPT 60 + P +L+A +A RAA L IT+SAVS++I LE + G L R T Sbjct: 4 RLPSLSSLRAFEAAALHLNLRRAAADLFITESAVSRQIASLEALLGVQLFHRANQRITLT 63 Query: 61 EQGQKLLALLRQVEL-LEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 G +R++ L+ + L + LA WL+P L A P Sbjct: 64 AAGTLYSGQVRELLRKLQRDTLDLMAHEGAGGTVELACVPTLAVEWLIPRLPAFYARHP- 122 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 + + + ++ A+ P D++ + + V F Sbjct: 123 GIVVNISAQSDIF-LFDGTPYDAAIHFGEAVYPGARADRMFDEESVAVCHPDFFG--GRK 179 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 ++ + ++P++ + +++ ++ + + AR + Sbjct: 180 RISPHDIARSPLLHLATRILGWKQWMEAAGIDDVNAMRGARFDHHSMVIAAARARLGVGL 239 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 +P + + LA+ +L+ QR +H +P++R M + L ++ + + Sbjct: 240 VPRFLVGEYLANRQLVMPV-AHSQRSTSAYHLVSPDTRPMSEAMQRLREWLLEAAGE 295 >UniRef50_A1UV62 Transcriptional regulator, LysR family n=56 Tax=Burkholderia RepID=A1UV62_BURMS Length = 330 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 55/290 (18%), Positives = 98/290 (33%), Gaps = 8/290 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPT 60 + P LQ V R R F RAA LC+TQ A+S++I+ LE +G L +R T Sbjct: 43 RLPPLNALQIFATVARHRSFTRAADALCVTQGAISRQIQSLEAHYGFALFMRHARGLTLT 102 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 +G++LL ++ + E+ T L L + + W+LP + + P Sbjct: 103 VEGEQLLPVVVESFARIEDISLKLTRQRTDLALKV---PTCVMRWVLPRIMRFQREHP-D 158 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L++Q+ R + A+ P L V + E Sbjct: 159 LHVQMTTTWRHDVDFQSEPFDAAIVYGISPGPDVAAVPLFDERLTPVCAPDLLE--GRPL 216 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 L ++ + +L +S + A QG + Sbjct: 217 ARVEDLACHTLLHPTRDHRDWRRWLDYAGAAGVDPDRGPSFDSLDLATSAATQGFGVALG 276 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG 290 E++ A+ L + + Y+ + PES ++ + Sbjct: 277 DLTLSEEDFAARRLAMPLDIVQRTGARYYFVY-PESVAQQQKIRRFSAWL 325 >UniRef50_C7LQL1 Transcriptional regulator, ArgP, LysR family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQL1_DESBD Length = 321 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 114/294 (38%), Positives = 165/294 (56%), Gaps = 3/294 (1%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 D + LQAL AVI E+ FE+AA+ L +TQSAVSQRI+QLE GQ L+VR+VP RPT Sbjct: 1 MIDTKHLQALAAVITEQSFEKAARSLFLTQSAVSQRIRQLEEHVGQMLVVRSVPIRPTSA 60 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTP--LLLSLAVNADSLATWLLPALAPVLADSPIR 120 G +L RQ+ +LEE + G ++LAVNADSL TW L ++ +LA + Sbjct: 61 GMAMLRHFRQLSVLEESLFEELAPGENSNIATVTLAVNADSLDTWFLRSIPDILAGENVL 120 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L+L V+D++ T LR GEV GA++ L LG ++YL V++ F ++ P G Sbjct: 121 LDLVVDDQSVTHAYLRSGEVQGAITSTPATFQGLLTHDLGDMEYLCVATPAFRMRHCPQG 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 TR A AP+V F+H D + FL+Q F P H++ S+ +F L QG MI Sbjct: 181 FTRQAADNAPIVIFNHKDALQHEFLRQRFGEEITP-PAHVMPSNISFQGLILQGGAYGMI 239 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 + E L GEL+DLTPG R ++ ++ +S + R++ + ++ L Sbjct: 240 SRILAEPHLRQGELVDLTPGETLRVPHFYQCWSLQSSLSRRIAEIIVRTARANL 293 >UniRef50_Q2RWN3 Transcriptional regulator, LysR family n=20 Tax=Alphaproteobacteria RepID=Q2RWN3_RHORT Length = 310 Score = 239 bits (612), Expect = 7e-62, Method: Composition-based stats. Identities = 91/301 (30%), Positives = 148/301 (49%), Gaps = 8/301 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 DY A+ V++ FE+AA+ L +T SA+SQR+K +E+ G L+ R P TE+ Sbjct: 1 MIDYPAALAVALVVQTGSFEKAAKALHVTPSAISQRVKMIEDRLGVSLIERGTPCIATEK 60 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPL-------LLSLAVNADSLATWLLPALAPVLA 115 G+ L + V +LE++ + + L+LA NADSL TW L A+AP Sbjct: 61 GEWLCRHMDHVGMLEKDLIKHMPGLAEAGADPLHRVTLTLATNADSLGTWFLGAVAPFAR 120 Query: 116 DSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEK 175 + +++ V+DE T + L RG V+ AV+ + + C V +LGAL Y +S F E+ Sbjct: 121 STDFLVSIAVDDEDYTADWLHRGRVLAAVTSLAKPVKGCRVTRLGALRYQATASPEFFER 180 Query: 176 YFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGT 235 YF GVT L +AP + F D + + ++++ P H + S++ FV G Sbjct: 181 YFARGVTPETLARAPALTFSQKDRLQRDWIRRTLGQSVS-FPTHWLPSTQGFVDACLAGM 239 Query: 236 TCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 M P + L +G L+++ PG L+W + + +T A++ + L Sbjct: 240 GWGMNPAQMVGAHLQAGRLVEILPGRTLDSPLFWQVNRLAADQLADLTRAVVGQASRALI 299 Query: 296 Q 296 Q Sbjct: 300 Q 300 >UniRef50_Q02J04 Probable transcriptional regulator n=7 Tax=Gammaproteobacteria RepID=Q02J04_PSEAB Length = 296 Score = 239 bits (612), Expect = 8e-62, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 106/295 (35%), Gaps = 5/295 (1%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQ 62 L+A R RAA + +T AVSQ+++ L+ G L R + R T + Sbjct: 5 LPLLALRAFVETARHGNLTRAAAAMGVTPGAVSQQLRALQARTGVVLFQRFSHGMRLTPE 64 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 G+++ LRQ L + + ++++ ATWL+P L A P ++ Sbjct: 65 GEQVYPGLRQAFEQITASLAQLEAINARQTITVSTEPSFAATWLVPRLGQFSASHP-QVE 123 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 ++VE + LRR + A+ P V L A + V+S + P Sbjct: 124 VRVEATALLAD-LRRERIDVAIRHGLGDYPGLDVQALMAPPLIPVASPRLLAE-GPEIRE 181 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 L P++ +D + P S V+ A G ++ Sbjct: 182 AIDCLAYPLLQESERNDWRLWLRAMGVEDDPRSERGPAFADDLLLVRAAEAGQGIALVRE 241 Query: 243 LQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 + E+ASG L + R Y+ P + ++ L + + + Sbjct: 242 IHARAEIASGRLAVALERPWPSRFAYYAVSLPGAAQRAPLS-LFLAWLREQAAAE 295 >UniRef50_A1WA39 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=A1WA39_ACISJ Length = 317 Score = 239 bits (612), Expect = 8e-62, Method: Composition-based stats. Identities = 71/315 (22%), Positives = 108/315 (34%), Gaps = 25/315 (7%) Query: 1 MKR--PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PP 57 M+R P + L +A R + RAAQ+L +TQSAVS++I LE G L RT Sbjct: 1 MRRHLPSTQALACFEAAARHESYTRAAQELALTQSAVSRQILALEEQLGVQLFRRTRHGV 60 Query: 58 RPTEQGQKLLALLRQVEL-LEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLAD 116 T G+ + + LE + L +SLA A WL+P L + A Sbjct: 61 VLTPAGRHYGQQVARWLQGLERDTLDVMAHQGHGGAISLAAVATFATRWLIPRLPLLAAR 120 Query: 117 SPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQ----ALPSCLVDKLGALDYLFVSSKPF 172 P + + +E +TR A+ P L D + V S Sbjct: 121 HP-EIVVHIETQTRPF-LFTDTAFDAALYAGTPEQVANWPGVQAQLLMQEDVVPVCSPRL 178 Query: 173 AEKYFP------------NGVTRSALLKAPVVAFDHLD-DMHQAFLQQNFDLPPGSVPCH 219 E G+ AL + P++ Q F P ++ Sbjct: 179 LETAAQQLGMPRGTGRAHQGLPPPALARLPLLQQSTRPYGWRQWFDAMGVPDAPRALEGP 238 Query: 220 IVNSSEAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHR--FAPESR 277 A G ++P + IE E+A GEL+ P + Y+ P+ Sbjct: 239 RYELFSMTAAAAAHGLGIALMPPMLIEAEIARGELVVACPRPLRGERGYYLVSPAQPQPP 298 Query: 278 MMRKVTDALLDYGHK 292 ++ L D Sbjct: 299 VLAAFAGWLQDMAVA 313 >UniRef50_Q7WNK1 LysR-family transcriptional regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WNK1_BORBR Length = 293 Score = 239 bits (611), Expect = 8e-62, Method: Composition-based stats. Identities = 73/297 (24%), Positives = 116/297 (39%), Gaps = 12/297 (4%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPT 60 + P + TL+A +AV R RAA++L +T SA+S++++ LE FG LL R PT Sbjct: 3 RIPSFTTLRAFEAVARLGNMTRAAEELSVTHSAISKQVQALEEEFGIQLLRRMPRAIEPT 62 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 +G +L A L L E + + P LSL+ +A + WL+P LA P Sbjct: 63 PEGARLAATLGTAFGLIEAGINQLR----PGPLSLSCSASIMMRWLIPRLANFKKMRP-D 117 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALP-SCLVDKLGALDYLFVSSKPFAEKYFPN 179 ++L+V + + LR G + A+ P ++ L V S +A Sbjct: 118 IDLRVSADHGPVDLLREG-IDVAIRNNVVPTPQDVVIKPLMREWVGPVCSPEYASS--VP 174 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 + L A ++ D + + + A G M Sbjct: 175 LRALADLGAARLLTTSSRPDAWSDWAALSGWAGEPLAEHESFEHFYLVLHAAACGLGVAM 234 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 P + +LASG L+ G + R P+ R R+ AL D+ Q Sbjct: 235 APRFLVADDLASGRLVAPF-GFLEGRRTVVLWITPQLRT-REDIRALSDWLQAEALQ 289 >UniRef50_C6DEW9 Transcriptional regulator, LysR family n=4 Tax=Pectobacterium RepID=C6DEW9_PECCP Length = 301 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 57/303 (18%), Positives = 113/303 (37%), Gaps = 12/303 (3%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-P 59 M R ++ ++ V+ F++AA+ L + S V++ IK+LE+ G LL RT Sbjct: 1 MDR--FQAMEIFIRVVDAGSFKKAAETLHVLPSTVTRSIKELESHLGARLLNRTTRALSI 58 Query: 60 TEQGQKLLALLRQVELLEEEWLG--DEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 T+ G + + + +Q G + + + +L+PAL Sbjct: 59 TDVGLRYYDSCKAILRDVHAAESVTAQQKGELNGTIRIGAPPSLVKNFLIPALPDFCERY 118 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 P + L T + ++ G + + L + +LGA + +S + E++ Sbjct: 119 P-GITLDFHLGDATVDIVQHG-IDCVIRTGEPPLSRLVARRLGAFHWYICASPRYLEQHG 176 Query: 178 PNGVTRSALLKAPV---VAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQG 234 + T +L + F + + VN ++A+V G Sbjct: 177 -HPATLDSLKAHTAVGYIHSRTGRSTRWGFHDEAHTVAMPLAGQISVNDTDAYVAAGVAG 235 Query: 235 TTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 I + + LA G L+ L P + + + P+SR + A +D+ + Sbjct: 236 LGLIRIASYMVRQPLADGHLVRLFPDIGAPLEPIFILY-PQSRHLSPAIRAFIDWCTARI 294 Query: 295 RQD 297 Q+ Sbjct: 295 EQE 297 >UniRef50_B5XWH9 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=B5XWH9_KLEP3 Length = 305 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 104/297 (35%), Gaps = 11/297 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTE 61 +L + F +AA+ L I+ SAV + + +LE+ G L R+ T Sbjct: 1 MDSLTSLTSFVRTAETLSFVQAARLLGISASAVGKNVARLEHKLGVRLFNRSTRNVSLTA 60 Query: 62 QGQKLLALLRQVELLEEEWLGDEQT--GSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 +G L + + +E + + L ++ LLPAL P Sbjct: 61 EGAAFLTRCQSILEQIQEAESELTSSLSQPTGKLRIS-LPVIGYRLLLPALTAFTRLYP- 118 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 ++ L ++ R + G V A+ A + KLG ++ +S + +Y P Sbjct: 119 QVELDLDFSDRLVNLIDEG-VDVAIRSGELADSRLIARKLGGFRFVLCASPAYLAEYGPP 177 Query: 180 GVTRSALLKAPVVAF---DHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 + L + F + VN+ EA ++L+ G Sbjct: 178 D-SPKELAAHKCIFFRFPSTGLIQPWELRDMRLTGDFRAASVVTVNNIEAAIRLSAAGMG 236 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 +P + + + G+L ++ PG + + + P SR + +D+ Sbjct: 237 IAYVPDFVVREAMDEGQLQEVLPGCCIKDGHFSVLW-PASRYLSPRIRCFIDFMAAA 292 >UniRef50_UPI0001AF3FFF LysR family transcriptional regulator n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF3FFF Length = 304 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 51/288 (17%), Positives = 97/288 (33%), Gaps = 8/288 (2%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQGQ 64 L A +A R F +AA +L +TQSAVS++++ LE L R T G Sbjct: 1 MSLLLAFEAAARHGSFTKAADELSLTQSAVSRQVQALEAQLDVELFKRDGRRIELTTAGA 60 Query: 65 KLLALLRQVELLEEEWL-GDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP-IRLN 122 L S L LAV + WLLP + P ++ Sbjct: 61 LYQHELAAALGRIRSATLQTIAHKSEGGTLHLAVLPTFGSKWLLPRMNDFYTRHPGYVVH 120 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 + + E+ + H P + L + + ++S Y ++ Sbjct: 121 IHSRIVNADLTPVAS-EMNAIICAGHGNWPGYIAHMLVSEKLVVIASPKALPGY--RSMS 177 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 + + +++ + + N P + +Q G ++P Sbjct: 178 TAEVALQSLLSVVSRPNAWSDWFDSNQLAHHVMRPGPSFELTSHLIQAVTAGIGIALVPR 237 Query: 243 LQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG 290 + ++ E++SGEL+ L Y+ +A + + + D+ Sbjct: 238 ILVQDEISSGELVTLF-EPLDSGRNYYLAYATRFQNLPSLC-VFRDWL 283 >UniRef50_D0D8S3 Transcriptional regulator, LysR family n=1 Tax=Citreicella sp. SE45 RepID=D0D8S3_9RHOB Length = 300 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 67/290 (23%), Positives = 107/290 (36%), Gaps = 12/290 (4%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTE 61 PD R LQ + R F RA ++L +TQSAVS++I+ LE G+ L R T Sbjct: 8 LPDMRILQTFELAARHGNFTRAGEELALTQSAVSRQIRDLEEQLGKLLFERLRGRVVLTR 67 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLL-LSLAVNADSLATWLLPALAPVLADSPIR 120 G+ LL ++++ + E + G+ LS+ WL+P LA LA P Sbjct: 68 AGEDLLPEVQRLLRMAERTMRHATAGAAGETVLSVNALPSFAQRWLVPRLAEYLAQHP-G 126 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 L L + + + A+ P L + + V+ P Sbjct: 127 LRLDLSTRGGIFD-FDEVQCDLAIHYGQPIWPGGCCTYLCSEIVVPVAGAAL-----PAV 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 AL + P + + + + + H V+ ++ R G ++ Sbjct: 181 TRAEALAERPKIHLAERPALWSEWFGRQGVELENANEGHWVDEIALAIETVRAGLGYALL 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG 290 P IE+ELA+G L F M Y+ PE R D+ Sbjct: 241 PLYLIEQELAAGTLRVALDAPFSTDMAYY-IVTPEGRADGAAG--FRDWL 287 >UniRef50_C5AIJ9 Transcriptional regulator, LysR family protein n=4 Tax=Burkholderia RepID=C5AIJ9_BURGB Length = 301 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 61/304 (20%), Positives = 111/304 (36%), Gaps = 12/304 (3%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-P 59 M R L A A+ +R F AA+ L ++ SA+S ++ LE G L RT Sbjct: 1 MLRAGLSELTAFVAIAEQRSFRAAARALAVSPSALSHAMRSLEARLGVRLFNRTTRSVAL 60 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTG--STPLLLSLAVNADSLATWLLPALAPVLADS 117 TE G++LL + E + + T + + S + L L Sbjct: 61 TEAGERLLHRVGPALSDLESAVDEVSTAQNRPSGSVRINAPETSARLLIRHVLPDFLLRY 120 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGA-LDYLFVSSKPFAEKY 176 P ++++ +TR + + G + + + G + ++ V+S + ++ Sbjct: 121 P-DIHVEFVTDTRLIDIVAEG-FDAGIRALDDVPRDMIAVRFGPDMRFIAVASPAYLARH 178 Query: 177 FPNGVTRSALLKAPVV--AFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQG 234 P + L++ + F+ + F + + A ++ A G Sbjct: 179 -PAPERPADLMQHRCIRHRFESGALLRWDFQLDGKTCSLDVNGPLTLGNPNAMIEAALAG 237 Query: 235 TTCCMIPHLQIEKELASGELIDLTPGLFQRRM---LYWHRFAPESRMMRKVTDALLDYGH 291 +P QIE+ LASG LI L LY+ +R T A+ D+ Sbjct: 238 IGVAWVPESQIEEHLASGRLIALLDAWSVPLPGLALYYPANRHPPAPLRLFTQAVRDWVA 297 Query: 292 KVLR 295 +R Sbjct: 298 GGVR 301 >UniRef50_C8SMW5 Transcriptional regulator, LysR family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SMW5_9RHIZ Length = 313 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 50/298 (16%), Positives = 102/298 (34%), Gaps = 9/298 (3%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-P 59 M R L A F A + L I+ SAV + + +LE G LL R+ Sbjct: 19 MDR--LNGLLAFARTAELGSFIAAGRALGISASAVGKSVARLEQELGVRLLQRSTRRVGL 76 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATW-LLPALAPVLADSP 118 TE+G+ +R++ ++ L ++ + LLP L+ +A P Sbjct: 77 TEEGRLFDERVRRILDDIDDAEAMLSRTRETPRGRLRISTPIVTYHLLLPVLSEFMARYP 136 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 + L ++ R + + G + A+ + + L ++ + +++ Sbjct: 137 -EIELDIDFNDRVVDVIEEG-IDVAIRSGELPDSRLVSRPVAPFRMLLCAAPSYLDRHGT 194 Query: 179 NGVTRSALLKAPVVAFDHLDDMH-QAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 V + L++ + F L+ + P N+ EA G Sbjct: 195 PSV-PADLIRHFGINFRFLNSGRLLDWPFTTGSAEPQIRSMLTCNNMEALKGATLAGLGI 253 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 +P + + L +L + R + + P +R + +D+ + L Sbjct: 254 ACMPDFLVREALHDSKLRIVLDDHVDGRGQFRMLW-PSNRHLSPKVRVFVDFLPERLA 310 >UniRef50_Q0K3U7 Transcriptional regulator, LysR-family n=1 Tax=Ralstonia eutropha H16 RepID=Q0K3U7_RALEH Length = 325 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 61/293 (20%), Positives = 110/293 (37%), Gaps = 8/293 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P L A + R AA++LC+TQSAVS++I +LE+ G +L R T Sbjct: 32 LPALANLIAFETTARTGSVTGAAEELCLTQSAVSKQITELESFLGARMLNRRKGAVAATP 91 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTP-LLLSLAVNADSLATWLLPALAPVLADSPIR 120 G+ L +R+ L EE + Q+G L+L+V WLLP + + P + Sbjct: 92 AGEDYLRNVRKALALLEEATMEVQSGRAAGGRLNLSVPVSLGNIWLLPRILRFVKAQP-Q 150 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 + L V + + G + A+ P K+ L + + G Sbjct: 151 IQLNVTTKVGPVDLESTG-LDAAIMYCAGPPPRHFSLKVMPLVLYPMCAPELLP---GGG 206 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 A+ + P++ + A+L+Q P +Q A G ++ Sbjct: 207 TLAKAVKRLPLLHQIAALEAWPAYLRQAGIKLPHPDDGSRYGLLTMGLQAAVSGMGVALL 266 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 P +++ +G L+ L+ + Y+ PE + + + + Sbjct: 267 PDYVAGEDIKAGRLLRLSDEPYVSPKAYYFI-CPEDKRDNPAMQTFIAWLLEQ 318 >UniRef50_A6U7H9 Transcriptional regulator, LysR family n=3 Tax=Rhizobiales RepID=A6U7H9_SINMW Length = 302 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 52/295 (17%), Positives = 106/295 (35%), Gaps = 6/295 (2%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-P 59 M+ P + L+AL++ R RAA++L +T+SAVS +++ LE G LL R Sbjct: 1 MRIPSTQALRALESFARHGTVWRAAEELHLTRSAVSHQLRLLERELGFDLLERVGKGVAL 60 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 T +G++ + + + + + G ++ + WL +A Sbjct: 61 TARGRRYAHDVHKALTMIGDAGAQNRGGGIGGSFRVSCTPGFASLWLCTHIAEFQEMY-Q 119 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 ++L + R + + +V ++ P+C V+ L + + + S + Sbjct: 120 DVSLSI-VTPRRLDDVSNPDVDAFIAFGDGNWPNCGVELLCDVLFTPLCSPSLLNRLGGF 178 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 + +L+A ++ + +DD +L + A G M Sbjct: 179 SK-PADVLRANLLHLNDVDD-WSRWLSLTKVETADPSGGIFFSDMNLVFSAAIAGQGIAM 236 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 L + L+ G L+ Y+ ++ V A D+ L Sbjct: 237 GDSLTGQTALSEGRLVRPFDIAVPAARSYYLVVDL-AKSDHAVLFAFRDWLRSSL 290 >UniRef50_D1P0T8 Transcriptional activator AmpR n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P0T8_9ENTR Length = 326 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 66/292 (22%), Positives = 115/292 (39%), Gaps = 11/292 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 R L+A +A R F RA +L +TQ+AVSQ+++ LE G L +R T+ Sbjct: 42 RLPLNALRAFEASARHLSFTRAGMELNVTQAAVSQQVRLLEEQLGLELFIRLPRGLALTD 101 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 +G LL +L + E L G +L+++V WLLP L+ P + Sbjct: 102 EGSALLPVLSRSFDQIEALLQQFDDGHYHEVLNISVVGTFAVGWLLPRLSRFSELYPY-I 160 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 +L++ G V A+ P L + + + S EK Sbjct: 161 DLRIMTHNNVVNLAGEG-VDFAIRFGEGLWPLVDNTPLFSAPHTVLCS----EKIAKQLN 215 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 + L P++ D+ + FL + P V I +SS V+ A + + P Sbjct: 216 HPTDLKNYPLMRSYRKDEWEKWFLAA--KIEPWRVKGPIFDSSRLMVEAALFSDSVAIAP 273 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 E+EL++G+++ + YW +S+ M + ++ + Sbjct: 274 SCMFERELSAGDVVQPFD-ISVTLGGYWLS-RLKSKPMTPAMNIFRNWLLEE 323 >UniRef50_B0T0F0 Transcriptional regulator, LysR family n=1 Tax=Caulobacter sp. K31 RepID=B0T0F0_CAUSK Length = 305 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 106/297 (35%), Gaps = 11/297 (3%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQ 62 ++ +A R + F RAA +L ++Q+AVS ++K LE QPL R T Sbjct: 8 LPLSAIRIFEAAARLKSFTRAADELGVSQAAVSWQVKALEQRLDQPLFTRLPREVVLTPA 67 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 G++L + L + D + +LS+ WL P L P R+ Sbjct: 68 GERLARAATEAMGLLRAAVSDLV-DTEEGVLSITTVQSVGGQWLAPRLGGFQIAHP-RIA 125 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 ++++ +R + LRR A+ P L + + F + T Sbjct: 126 VRLDASSRIAD-LRRETFDLALRAGSGDWPGLEAHFLIPSAQTVLCTPTFLARIGG-LAT 183 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFD--LPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 + +L+ P + + A+ + + P + ++ V A + Sbjct: 184 PADVLRVPRI---GAPNFWAAWFEAAGVNMGEDHTPPRLMADAQALEVASALADQGVALG 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 + +++A G L+ + YW + E R +R A D+ D Sbjct: 241 SPIFFAQDIAQGRLVAPFDITARYGGGYWLAYPAERRRVR-KIAAFRDWILAQAASD 296 >UniRef50_Q13LU0 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13LU0_BURXL Length = 307 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 105/297 (35%), Gaps = 6/297 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTE 61 P L+A ++ R R F +AAQ+L +TQSA+S+ ++ LE +FG PL R T Sbjct: 4 LPPLAALKAFESAARHRSFTKAAQELFVTQSAISRHVRHLEQLFGIPLFYRDHRAVTLTP 63 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 +G+ + + + + + +L+L + WL+P L +P + Sbjct: 64 EGEAYMYEVVEAFSRIDLATRRLKVSGRQNILNLQAYSTFAMYWLIPRLGKFQQINP-EI 122 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQA-LPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 ++++ T + ++ ++ + DKL + V + P Sbjct: 123 DVRLTASTAPLD-FDHTDIHASIRTVNGPLEDDLRGDKLFDYRLIAVGAPAALSSQ-PPL 180 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI 240 L A ++ + +L SS A+QG + Sbjct: 181 REPGDLKSAMLLHSMARPEDWGVWLNAVGANDVPLERGLRFESSAMVYLAAQQGLGIAIA 240 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD 297 I++EL G L + P Y+ +P + + + L D Sbjct: 241 QSFLIQEELQKGFLTKVFPYEVPSERTYYLLSSP-RHVGDVALELFRKWLLDELASD 296 >UniRef50_Q2RS38 Transcriptional regulator, LysR family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RS38_RHORT Length = 304 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 101/297 (34%), Gaps = 10/297 (3%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQGQ 64 ++ L V+ F A + L + S+VS+++ LE+ G LL RT TE G Sbjct: 4 LSGMRLLSRVVEAGSFSEAGRLLGMAPSSVSRQVSALEDTLGTQLLNRTTRRLSLTEAGG 63 Query: 65 KLLALLRQVELLEEEWLGDEQT--GSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 ++ E+ + + L L V + PAL LA P L Sbjct: 64 LFHDRALRILADVEDATRVVSSLESAPRGTLKLNVPVGFGNYHVAPALPLFLARYP-DLT 122 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 + + + + G V AV I S + +L + S + + T Sbjct: 123 VDLTLSDHFIDLIEEG-VDVAVRIGALRDSSLVARRLADNRRMVYGSPDYLRRMGT-PET 180 Query: 183 RSALLKAPVVAFDHLDDMH-QAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 L +A+ + F + L N+SE+ ++ G+ M+P Sbjct: 181 PHDLTAHRCIAYRYRPGPQGWLFERDGIRLDITVTGPLTANNSESLHKMILGGSGLAMLP 240 Query: 242 HLQIEKELASGELIDLTPGLFQRR---MLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 ++ SG L+ L H PESR + A +D+ + Sbjct: 241 TWMAYSDVKSGLLVPLLGDWTMSPTSLESAIHVVYPESRHLSAKVRAFIDFMADHIG 297 >UniRef50_Q1LJ78 Transcriptional regulator, LysR family n=8 Tax=Burkholderiaceae RepID=Q1LJ78_RALME Length = 296 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 53/291 (18%), Positives = 102/291 (35%), Gaps = 8/291 (2%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRT-VPPRPT 60 + P L A +A R F RAA++L +T SAVS RIK LE ++G L VR+ R T Sbjct: 7 RVPPLHLLIAFEAAARLGSFARAAEELSVTPSAVSHRIKNLEELWGDDLFVRSNAALRLT 66 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 G + ++ E L + L +A+ L+P L A P Sbjct: 67 AAGTRYQRNVQDALKSLNE-LARPEYNKLRTRLRVAIPPTFGRQHLVPRLPEFTALYP-H 124 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 ++L++ + ++ + + P KL + + E+ Sbjct: 125 IDLELHLAVPFLD-VKAEDTDIEIRYGTGRYPDLKTTKLLVEPVFPACGREYYERVNGFA 183 Query: 181 VT-RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 VT L ++ + + + + P N ++ + Sbjct: 184 VTKPEDLHNLTLLRSP--LEPWRPWFETACLDWPEPQTGAQFNDIGLMLEAIVSNQGVGL 241 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG 290 + + LA+G+++ L Y+ ++ +M + +D+ Sbjct: 242 VRQRMARQWLAAGQMVKLLDIESVSPHGYYIVEREQAPLMPE-ARYFIDWL 291 >UniRef50_C8SGU4 Transcriptional regulator, LysR family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SGU4_9RHIZ Length = 330 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 61/300 (20%), Positives = 103/300 (34%), Gaps = 11/300 (3%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTV-PPRP 59 + R L+A++ V R AA +L ++ SAVSQ+I + E GQ L RT Sbjct: 4 LNRIHLNGLRAVETVARLGSLAAAASELNVSVSAVSQQISRTEKQLGQALFERTTSGLVL 63 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 TE G L + + +T L ++V + WLLP L+ P Sbjct: 64 TEFGTVFATRLGAGFRELAQAVA-LADEATQCTLVVSVAPAFASKWLLPRLSRHFDRHPN 122 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 L L+++ R L ++ A+ + P + L A + V + A K Sbjct: 123 VL-LRIDASVRLAN-LDHSDIDIAIRLGDGKWPGGRAELLLAQEVFPVCAPDIARKLR-- 178 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 + L + + + +++ P ++ A G + Sbjct: 179 --SIEDLAQTCAITDERAMINWESWFTAAGVQPVTFQKGARFTDPMLCLESAIAGHGVML 236 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRF---APESRMMRKVTDALLDYGHKVLRQ 296 L LA G L+ Q + YW ESR +R + + + Q Sbjct: 237 GWQLLAADALADGRLVAPFGIRAQSGLGYWLVTSAEKTESRKVRDFKAWIKEEIAATMAQ 296 >UniRef50_A7ID93 Transcriptional regulator, LysR family n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7ID93_XANP2 Length = 314 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 64/297 (21%), Positives = 103/297 (34%), Gaps = 10/297 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPT 60 + P L+A +A R F AA++L +TQ+AVS+ ++ LE+ G PL R T Sbjct: 4 RLPSLNGLRAFEATGRHGSFTAAARELNVTQTAVSRLVRLLEDRLGFPLFRRHANALELT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR 120 QGQ LL+ L +L++ V TWL+P LA P Sbjct: 64 AQGQALLSGLTDAFDTIARLTESVTAMRGGPVLTVGVGPTLAVTWLIPRLAHFYRSHP-- 121 Query: 121 LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 +++V T R R + + ALP + L + V + A Sbjct: 122 -DVEVRMATGGATRPVRDDWTCTIRRDTDALPGYNAECLFPSTVVPVCTPKLASTLR--- 177 Query: 181 VTRSALLKAPVVAFDHLD-DMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 + L A ++ H+ + F P S+ +Q A G + Sbjct: 178 -SPDDLRNATLIVVSHMPNEWPHWFAAAGLRSPVHPAGEVSFESNVMAMQAALDGVGVAI 236 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 + LA+G L+ P + W R A + H+ + Sbjct: 237 AQIPYVSDALAAGRLVAPFPIVAHTVGG-WLLEYRAIRKEDPALLAFRGWLHQEADR 292 >UniRef50_Q88KW3 Transcriptional regulator, LysR family n=14 Tax=Proteobacteria RepID=Q88KW3_PSEPK Length = 328 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 53/294 (18%), Positives = 99/294 (33%), Gaps = 13/294 (4%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P L+ + V R F AA++L +TQ+AV+Q+I+ LE L R T+ Sbjct: 39 LPSLNALRVFEVVARHLNFRLAAEELGVTQAAVAQQIRGLEASLNLRLFERLPRGLALTD 98 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G +R + +E + ++ L+++V + WL+P L P + Sbjct: 99 AGLGYSGSIRNALAMIDEATRLLRPQASH--LTVSVTPTFASKWLIPRLGSFAHSHP-DI 155 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQAL-PSCLVDKLGALDYLFVSSKPFAEKYFPNG 180 +L+V R G V AV + + L + V+S E Sbjct: 156 DLRVLATDRLSHFNTDG-VNLAVRYGKPDIGAGLNSELLMEQRIVAVASPTLFEASKT-P 213 Query: 181 VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGS-VPCHIVNSSEAFVQLARQGTTCCM 239 + L ++ H D FL Q F + N + + A G + Sbjct: 214 TSFEQLQAFTLLHDAH--DFWPRFLAQVFPQHGQATARNLRFNQTSLAIDAAISGQGIAL 271 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAP---ESRMMRKVTDALLDYG 290 + ++ +G L + + ++ + + + V Sbjct: 272 ASLAFVSDDIVAGRLTQVFAQQLRLDKSFYLVWPRKLQQPESLGIVQRWFKQQA 325 >UniRef50_A8GAZ3 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=A8GAZ3_SERP5 Length = 303 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 66/300 (22%), Positives = 111/300 (37%), Gaps = 11/300 (3%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-P 59 M+ D+ L+A ++ F RAA +L I+ SA+SQ + LE G LL RT Sbjct: 1 MRGSDFAELRAFAVIVEHGSFTRAAAQLGISASALSQTQRNLETRLGVRLLNRTTRSVAL 60 Query: 60 TEQGQKLLALLRQVELLEEEWL--GDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 T+ G+ LLA L E + L L + + +L P LAP A Sbjct: 61 TQAGELLLARLSPAMAEIEAAVTQTAALRLQPAGTLRLNASGLAAIHYLAPLLAPFNAHY 120 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGAL-DYLFVSSKPFAEKY 176 P + + + E R + + G V + + + LG V+S + +Y Sbjct: 121 P-DIVVDLSVEDRLVDMVAAG-FDAGVRLHERLEKDMVAVALGGEQRMCVVASPAYLARY 178 Query: 177 FPNGVTRSALLKAPVVAF---DHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQ 233 T AL + + + F + L IV+ + V+ A Sbjct: 179 GT-PQTPDALRQHRCLNTRWPTNGSIYRWEFERGGEKLEIAVEGPLIVDEPQVLVRAAAD 237 Query: 234 GTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKV 293 G + Q+ + L G L+ L ++ + P +R M + A +D+ + Sbjct: 238 GLGIAYLFESQVAEALNDGRLLPLLAAWTPPFPGFY-LYYPANRQMPRPLRAFIDFARQQ 296 >UniRef50_Q48M51 Transcriptional regulatory protein n=14 Tax=Pseudomonadales RepID=Q48M51_PSE14 Length = 305 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 105/297 (35%), Gaps = 5/297 (1%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-P 59 + P + LQA + R RAA+ L +T SAVS ++ +LE + G+ L VR Sbjct: 9 LSLPPLKALQAFEQTARFGNLARAAEVLDLTPSAVSHQLARLEALIGRQLFVRAARGVTL 68 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 T G++ L + V + + L L WL+P L P Sbjct: 69 TPVGEQYLKDVSGVLHSLAVATERAASDVSLDCLRLHSAPSFGLLWLMPRLEAFRVSHP- 127 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 + + + + R ++ + PS V L + ++S + Sbjct: 128 DIQINLSCSYESL-HFSRDKIDVDIRHGRPNWPSYEVRTLRDEKFAVLASPQLLARR--P 184 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 + + LL+ ++ + + ++ P + S ++ A G + Sbjct: 185 VHSAADLLERELILSEATLLKWPEWFARHGLARPEKPYALSFDRSYMTLEAASHGLGFAL 244 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 L +K L +GELI++ P + H P++ L++ L Q Sbjct: 245 ESTLLAQKYLGTGELIEVAPQELTAPVAAHHLVFPKAHSGFPRVRRFLEWMEHELGQ 301 >UniRef50_A4XWR7 Transcriptional regulator, LysR family n=57 Tax=Proteobacteria RepID=A4XWR7_PSEMY Length = 304 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 58/288 (20%), Positives = 111/288 (38%), Gaps = 10/288 (3%) Query: 12 LDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVR-TVPPRPTEQGQKLLALL 70 AV F AA++L ++ S VS+++ +LE L R T TE GQ L Sbjct: 10 FVAVAECGQFSAAAERLGLSTSQVSRQVARLEERLQSRLFYRSTRRVALTEAGQLFLQHC 69 Query: 71 RQVELLEEEWLGDEQ--TGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVEDE 128 ++++ EE L LL + +++P + +A P +L +++E Sbjct: 70 QRLQDAREEALRAVGDLGAEPKGLLRMTCAVAYGERFIVPLVNDFMARHP-QLRVEIELS 128 Query: 129 TRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSALLK 188 R + L G + A+ + + +L + ++ + ++Y + S L + Sbjct: 129 NRQLDLLHEG-LDLAIRLGRLQDSRLMAARLAPREMYLCAAPEYLQRYG-RPHSLSELAR 186 Query: 189 APVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIEKE 248 + H +F+ + NS +A + A +G C +P + + Sbjct: 187 HNCLI---GSSDHWSFVDNGRETQMRVQGNWRCNSGQAVLDAALRGFGLCQLPDYYVLEH 243 Query: 249 LASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 LASG L+ L W + P+ R + L+D+ L + Sbjct: 244 LASGALVSLLQQHRPPNTAVWALY-PQQRHLSPKVRQLVDHLKAGLSE 290 >UniRef50_B3Q4T7 Putative transcriptional regulator protein, LysR family n=2 Tax=Rhizobium etli RepID=B3Q4T7_RHIE6 Length = 301 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 53/289 (18%), Positives = 102/289 (35%), Gaps = 5/289 (1%) Query: 9 LQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPTEQGQKLL 67 ++ V+++ GF AA+ L IT SAVS+ I +LE G LLVRT TE+G+ Sbjct: 7 MEVFARVVQDGGFSAAARNLDITPSAVSKLIARLEARLGTRLLVRTTRALTLTEEGEAYH 66 Query: 68 ALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVED 127 ++ + G+ L + ++ P + +A +P L + + Sbjct: 67 HAALKILQELNDADQAAAGGAVRGRLRINTTIPFGTMFVAPVIPDFIARNP-DLIVDLSF 125 Query: 128 ETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSALL 187 + + + A+ + + KLG + +S + + V + L Sbjct: 126 TDGIVDLVAE-KTDVAIRMGDLPDSGLIARKLGQSRRVVCASADYLVRCGS-PVKPADLE 183 Query: 188 KAPVVAFDHLDDMHQAFLQ-QNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIE 246 + F+ + D+ +VN+ E Q+A G + + Sbjct: 184 HHDCLTFNFRRARPSWPFRCGGQDVAQPVKGSIVVNNGETMKQMALAGAGIARVGLFHVA 243 Query: 247 KELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 E+A+G L+ L + H + ++Y L Sbjct: 244 DEIATGRLVPLLEEYNPGDLELVHAVYVGGGPLPHRVRDFIEYMVVTLG 292 >UniRef50_D0B618 Transcriptional regulator n=56 Tax=Alphaproteobacteria RepID=D0B618_BRUME Length = 325 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 100/292 (34%), Gaps = 8/292 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 ++ V+ AA+ L ++ + VS+R+ +LE G LL RT TE Sbjct: 21 MSSLADMEIFARVVATGSMSAAARDLGLSPAVVSKRLGRLEERLGTRLLQRTTRQIALTE 80 Query: 62 QGQKLLALLRQVELLEEEWLG--DEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 GQ + + EE ++ L ++ + P L P + + Sbjct: 81 AGQGYHERVLAILANIEEAEAFVARRSADARGTLKISAPTTFGRMHIAPYLVPFMRAN-A 139 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 L + ++ + + G A+ I + + + +L + +FV++ + ++ Sbjct: 140 DLTVNMQLSDEMVDIVGDG-YDLAIRIGELSDSTLVARRLAPVRRIFVAAPRYLKERGT- 197 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 T L +A + D + NSSE + G Sbjct: 198 PQTIEDLQDHICLAPHNNDPWR--LEGPKGPIVIRPTGPLQTNSSEIVREAVLAGLGIAQ 255 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGH 291 + ELA+G+L+ + P R + H P + + +DY Sbjct: 256 RSTWDVGPELAAGKLVQVLPDYAASRNVAIHAVYPSKQFLPAKVRLFIDYLA 307 >UniRef50_C6DER6 Transcriptional regulator, LysR family n=12 Tax=Bacteria RepID=C6DER6_PECCP Length = 298 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 105/296 (35%), Gaps = 8/296 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTE 61 V R F A + L ++ SAV + + +LE G L R+ T Sbjct: 1 MDSLNGFMVFVQVAETRSFVAAGRLLGVSASAVGKSVARLEEKLGVRLFHRSTRSITLTA 60 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 +G LA R++ E + L V+ +++ +LP L + + P + Sbjct: 61 EGSLFLARSRRILAEIEAAELELSQTKAVPRGRLRVSLPLVSSLVLPVLGEFMREYP-EI 119 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 L ++ R + + G V +LG +L V++ + +Y Sbjct: 120 ELDLDFTDRMVDVIEEG-FDAVVRTGDPVDSRLTARRLGTFRFLVVAAPDYLARYGC-PQ 177 Query: 182 TRSALLKAPVVAF---DHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 T + L++ + + + A + I N+ E V A QG Sbjct: 178 TPADLMQHACLHYRFPNSGKLEPWALRLPPGEPELPLPTSMICNNIETRVCFALQGLGIA 237 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 +P I ++LA G+L + +R ++ + P S+ A +D+ + Sbjct: 238 YLPDFSIREQLAGGQLQPILTDYVERSGVFHVLW-PASKHPSPKVRAFVDFLCARV 292 >UniRef50_Q98NI2 Transcriptional activator; AmpR n=1 Tax=Mesorhizobium loti RepID=Q98NI2_RHILO Length = 303 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 62/297 (20%), Positives = 97/297 (32%), Gaps = 10/297 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P ++ +A R F +AA++L +TQSA S +IK LE G PL +R TE Sbjct: 5 LPPLGAIRVFEAAARLGSFTKAAEELGMTQSAASYQIKVLEERAGTPLFIRKTRQIALTE 64 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 GQ+L + + G+ +LS+ WL L P L Sbjct: 65 AGQQLAPHASGAFSALADAWVATKGGA-TGVLSVTTMETFATNWLAVWLGTFQLMHP-DL 122 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 ++V R + R ++ + L DY + S AE Sbjct: 123 AVKVNTSPRLVD-FTREDMDIGIRTGTGNWSGLTAHYLFKADYTPMLSPKLAESVGG-IR 180 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFD--LPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 L K P+ D D + + + P + ++ S A + Sbjct: 181 RPEDLYKVPLCCAD--DPWWKIWFEAAGVPFEPDRVIAGPMLGSQAYDAMAALTDRGAAI 238 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 + LA+G+LI L YW ESR D+ + Sbjct: 239 LTRNIYSALLANGQLIQPFDVLGSDGDGYW-LVHLESRRNVPKIKVFRDWVLAQTAE 294 >UniRef50_C6QHI5 Transcriptional regulator, LysR family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QHI5_9RHIZ Length = 318 Score = 236 bits (604), Expect = 6e-61, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 104/297 (35%), Gaps = 10/297 (3%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PT 60 K P L+A +A R F RAA +L +T +A+S+ ++ LE F PL RT T Sbjct: 4 KLPPLNALKAFEAAARLSSFSRAAGELNVTHAAISRHVRSLEEEFRTPLFERTGRGVELT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGD-EQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 E G L L + L + L + + A WL P + + P Sbjct: 64 EAGLSLAQSLTKSFDLIAAASSQFARPSRRRRRLVVTSDVSFAALWLAPRIGRFTSLHP- 122 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 ++L V+ R + + +V V KL + V S + + Sbjct: 123 GIDLVVDPSHRLVD-FGKEDVDLGVRYGFGEWEGVDARKLVESQLMLVCSPAYLRAH--- 178 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 ++ ++ L ++ + + +A+L + +N + + A G + Sbjct: 179 PLSAASDLDPSLLIRETAKECWEAWLTAAGIIETIVPSGPTLN-GDLAIAAAEAGQGFAI 237 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 +Q L + L+ + R Y+ S+ + + + L+ Sbjct: 238 ADQIQAGDALRAKRLVSPLD-VVASRASYYLVRRAGSKKSEA-AEVFETWVREELQS 292 >UniRef50_A5W5M0 Transcriptional regulator, LysR family n=23 Tax=Proteobacteria RepID=A5W5M0_PSEP1 Length = 313 Score = 236 bits (604), Expect = 6e-61, Method: Composition-based stats. Identities = 57/296 (19%), Positives = 103/296 (34%), Gaps = 8/296 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RPTE 61 + V R F A+Q L I+ SAV +R+ +LE+ G L R+ T Sbjct: 16 MDSLSGFVVFNRVAETRSFVAASQSLGISASAVGKRVARLESRLGVRLFHRSTRSITLTA 75 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 +G L R++ E + S L V+ + ++PALA +A P ++ Sbjct: 76 EGTMFLERSRRILAEIEATEQELSQASETPRGRLRVSMPQVTRLVMPALAEFMALYP-QV 134 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 L ++ R + + G + LG + V+S + + + Sbjct: 135 ELDLDFSDRMVDIVGEG-FDVVMRGGQPVDSRLSAKFLGHFQHRLVASPEYLRERGT-PL 192 Query: 182 TRSALLKAPVVA--FDHLDDMHQAFLQQNFDLPP-GSVPCHIVNSSEAFVQLARQGTTCC 238 L + F + L+Q + N E V A Sbjct: 193 HPRDLAAHTCLHYRFPSNGKLETWPLRQEHPEQAYDIPISMVCNHVETRVCFALNHRGIT 252 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 +P + +ELA+G L+ + +RR ++ + P R M +D+ + Sbjct: 253 CLPDFNVGRELANGSLVSVLDDFMERRGSFYLLW-PSGRQMPPKLRVFIDFMLARV 307 >UniRef50_C5CNQ6 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CNQ6_VARPS Length = 306 Score = 236 bits (604), Expect = 6e-61, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 100/295 (33%), Gaps = 20/295 (6%) Query: 11 ALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQGQKLLAL 69 A +A F+RAA +L +T SA+S +++ LE+ G+PL R T G++L Sbjct: 22 AFEAAAAHLSFQRAALELSVTPSAISHQVRALEDTLGRPLFRRLTRQLALTPAGERLFDD 81 Query: 70 LRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVEDET 129 LR E + + S P ++L N A W+LP +A P + L++ Sbjct: 82 LRAGFDALEAGVERLRQPSAPQAVTLTTNTAFAARWVLPRMAAFRKACP-GIELRLHASD 140 Query: 130 RTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSALLKA 189 + L RG AV P + +L Y + S + L K Sbjct: 141 TLVD-LARGGADIAVRSGSGNWPGLVSRELMPERYAPLCSPML------GLKRAADLPKH 193 Query: 190 PVVAFD-----HLDDMHQAFLQQNFDLPPGSV----PCHIVNSSEAFVQLARQGTTCCMI 240 ++ D + + ++ PP + + A G ++ Sbjct: 194 ELIHCDWQPGAAAPALWPRWFKKAGIAPPRGRSMKAAGLSFSDETHAILAALAGHGVALL 253 Query: 241 PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 +EL SG L+ G Y+ A + ++ Sbjct: 254 SLTLAAEELRSGALVQPF-GPALDTGSYFLAVA-AGHEGEPAVRTVWEWIASQAA 306 >UniRef50_A5WB87 Transcriptional regulator, LysR family n=23 Tax=Proteobacteria RepID=A5WB87_PSEP1 Length = 305 Score = 236 bits (604), Expect = 6e-61, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 108/294 (36%), Gaps = 5/294 (1%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 P R +QA + R RAA+ L +T SAVS ++ +LE M G+ L R T Sbjct: 11 LPPLRAIQAFEQTARFGNVARAAEVLDLTPSAVSHQLAKLEAMIGRQLFFRAARGVSLTP 70 Query: 62 QGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 G++ L + + + + L L + WL+P L P + Sbjct: 71 VGEQYLKDVSGILHSLSVATERASSDVSLDCLRLHSSPSFGLLWLMPRLEAFRMAHP-DI 129 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 + + + R ++ + PS V LG + ++S ++ Sbjct: 130 QINLSCSYESL-HFSRDKIDVDIRHGEPNWPSYEVRTLGNEAFAVLASPKLLARH--RID 186 Query: 182 TRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIP 241 S LL+ ++ + A+ ++ P + S ++ A G + Sbjct: 187 DASDLLRRDLILSEATLLKWPAWFARHGLARPEKPYALSFDRSYMSLEAASHGLGFALES 246 Query: 242 HLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 L +K LA+G L+++ P +F + H P++ + L + + L Sbjct: 247 TLLAQKYLAAGTLVEVVPHIFSAPVAAHHLVFPKAHSGFERVRRFLAWMERELG 300 >UniRef50_A0AX28 Transcriptional regulator, LysR family n=6 Tax=Betaproteobacteria RepID=A0AX28_BURCH Length = 303 Score = 236 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 56/300 (18%), Positives = 104/300 (34%), Gaps = 10/300 (3%) Query: 1 MK-RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PR 58 M+ P + L A +A +R F A+++L +T A+ Q+I++LE G L VR + Sbjct: 1 MRSIPPLKALPAFEAAMRHGSFTLASRELNVTPGAIGQQIQKLEEWLGVALFVRQIRQVT 60 Query: 59 PTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 PTE G+ A ++ + + L++ A W P +A L +P Sbjct: 61 PTEDGRAYFAQIQPALAELIHASHRIRERRGSG-VRLSMPPSFAAKWFAPRMADFLQANP 119 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 + L + T + +V AV V L + +A++ Sbjct: 120 -GIALSLSTSTTMVD-FELDDVDLAVRHFDGMDARLSVQLLCHDEARAYCHPVYAKQR-- 175 Query: 179 NGVTRSALLKAPVVAFDHLDDMHQAFLQQNF--DLPPGSVPCHIVNSSEAFVQLARQGTT 236 L A ++ + + ++ + S + A + Sbjct: 176 RLKRPDDLRTATLLHNTLHPHWATWLARFSGLDGSQIETITGIRFDQSLIAIDAAVRAQG 235 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 + L +E ELA GELI+ Y+ P S ++ L + + + Sbjct: 236 VVLTSPLLVEAELARGELIEPFDNALALDAGYY-LVHPASAGTKQAVQLLKAWFTDSIAR 294 >UniRef50_C8QAF0 Transcriptional regulator, LysR family n=1 Tax=Pantoea sp. At-9b RepID=C8QAF0_9ENTR Length = 299 Score = 236 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 107/296 (36%), Gaps = 10/296 (3%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTE 61 R + L+ A+ + F +AA + IT SA+S ++ E G LL RT TE Sbjct: 5 RATLQELEMFAAIAQHLSFRKAASERNITPSALSHAMRNFEERLGVRLLNRTTRKVALTE 64 Query: 62 QGQKLLALLRQVELLEEEWLGDEQ--TGSTPLLLSLAVNADSLATWLLPALAPVLADSPI 119 G + L ++ + + + L +++ + A + + P + P Sbjct: 65 AGDRFLQRIQPALQDLAQAVDELNDWRSDPRGSLRISMPRSAEALFFQSLILPFMQRYP- 123 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLG-ALDYLFVSSKPFAEKYFP 178 + L+++ + + G V + G + L V++ F +Y Sbjct: 124 DITLEIDSNDSLLDIVAAG-FDAGVRYGAVLAQDMVAVPFGIPMRALAVATPEFIARYG- 181 Query: 179 NGVTRSALLKAPVV--AFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTT 236 + +ALL P + F F Q +++++E +Q A G Sbjct: 182 VPNSPAALLNFPCIERRFPSGRRYRWEFWQDGQKQEVAVNGSLVLDNNERILQAALAGAG 241 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHK 292 + H + + G+L+++ Q +W + P + + +D+ + Sbjct: 242 IAFLHHGTVMDAIQRGDLVEILSDFTQVEEGFW-LYYPSRKYLSTPLRYFIDWLKE 296 >UniRef50_D0L7H5 Transcriptional regulator, ArgP family n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0L7H5_GORB4 Length = 302 Score = 236 bits (603), Expect = 7e-61, Method: Composition-based stats. Identities = 94/297 (31%), Positives = 147/297 (49%), Gaps = 8/297 (2%) Query: 4 PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQG 63 L+ L AV+ FE AA +L +T SAVSQRIK +E G+ L+ RT P PT G Sbjct: 3 ISLDGLRTLRAVLEYGTFEAAAAELHVTPSAVSQRIKAMEVSVGRVLVHRTKPATPTSDG 62 Query: 64 QKLLALLRQVELLEEEWLGDEQTGSTPLL------LSLAVNADSLATWLLPALAPVLADS 117 + L+ L Q ELL E + L +A N+DSLATWLLPALA + + Sbjct: 63 EVLVRLAEQWELLSAEARLELVGDDGTGSPPRLIHLPIAGNSDSLATWLLPALARIHREH 122 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 P+ + + +DE+R + LR GEV+GA++ A+ C V LG++ YL V++ F + + Sbjct: 123 PVVVEVLRDDESRNSDFLRSGEVLGAITSDPVAIRGCTVVPLGSMRYLPVATPHFLDTWM 182 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 P+G +L +AP+V++D D + + L F P + +S + + G Sbjct: 183 PDGADEDSLSRAPMVSYDRNDHIQREAL-GRFSSHISEPPTVYIPASGEYHRAVELGMGW 241 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 ++P QI L +G ++ L+W + S ++ VT ++D L Sbjct: 242 GLVPTAQITDALTTGRVVRFLDA-DVDVPLFWQYWKLSSPLLDAVTQIIVDAARTEL 297 >UniRef50_D1UCW9 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UCW9_9BURK Length = 329 Score = 236 bits (603), Expect = 7e-61, Method: Composition-based stats. Identities = 56/286 (19%), Positives = 97/286 (33%), Gaps = 5/286 (1%) Query: 12 LDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQGQKLLALL 70 +A R + F+ AA +L +T SAVS I LE G L VR T G L+ + Sbjct: 35 FEAAGRHQSFKLAAAELNVTPSAVSHGIVGLEEALGVELFVREPRGISLTATGADYLSYV 94 Query: 71 RQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVEDETR 130 + L ++L+ + WLLP L A P ++N+ V+ R Sbjct: 95 SEAFSLIAIGTQRLPNHRANRPIALSCAPTFASRWLLPRLPHFRARWP-KVNVTVDTSHR 153 Query: 131 TQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSALLKAP 190 G A+ + + +L + V S + E T L A Sbjct: 154 QVGFPVDG-FDFAIRLSRAPVAGSAWTRLFGEQLVPVCSPGYLESLRDVQGTP-LLSNAT 211 Query: 191 VVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIEKELA 250 ++ + + Q +L+ V++ + + A G + + ++L Sbjct: 212 LIHVNAASEDWQTWLEATGAEHVDPDAGLRVDTIQLAFEAASMGLGVALGRRPLVNRDLE 271 Query: 251 SGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 SG L+ YW A + ++ D + Q Sbjct: 272 SGALVQAAFNTVNSATAYWLVSAENADRRPELLD-FRQWILAEAAQ 316 >UniRef50_A3K0M9 Chromosome replication initiation inhibitor protein n=1 Tax=Sagittula stellata E-37 RepID=A3K0M9_9RHOB Length = 290 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 99/292 (33%), Positives = 151/292 (51%), Gaps = 6/292 (2%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 D L AL+AV+R FE AA +L +T SA+SQRI+ LE+ G PL++R P TE Sbjct: 1 MYDPAQLSALEAVLRLGAFEAAAAELNVTPSAISQRIRSLEDRVGAPLVLRQSPASATET 60 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLN 122 G +L R+ L + L + ++ + +A+NADSL TW +PAL A + + Sbjct: 61 GARLARHAREC-ALLDAALARDLGRASQARVRIALNADSLDTWAIPAL----ARTDFLYD 115 Query: 123 LQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVT 182 + +EDE+ + RLR G+V A++ + Q + C LG + Y+ S F +K+FP G+T Sbjct: 116 IAIEDESVSDRRLRDGDVTAAITSRVQPVQGCDAVPLGVMRYIATCSPAFRDKHFPEGLT 175 Query: 183 RSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH 242 L KAP+V + D + + +L P P H + S+ FV+ AR G + P Sbjct: 176 EDTLSKAPMVDYSGKDVLQRRWLADLNGRPLSP-PTHHLPSTHGFVEAARCGLGWGLNPL 234 Query: 243 LQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 + L SG+LI + P L + LYW + + +R +T AL VL Sbjct: 235 PLVADLLESGDLIAMAPDLPRDVPLYWQVRSITAPAIRPLTRALRRAAADVL 286 >UniRef50_C6DIG5 Transcriptional regulator, LysR family n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6DIG5_PECCP Length = 315 Score = 236 bits (603), Expect = 9e-61, Method: Composition-based stats. Identities = 60/298 (20%), Positives = 103/298 (34%), Gaps = 7/298 (2%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-P 59 M ++ + A A + GF A Q L S +S+R+ LE G L+ RT Sbjct: 9 MNGTEFEQITAFLAAVEHGGFTTAGQALGRDGSILSRRVTALEKRLGVRLMERTTRRLAL 68 Query: 60 TEQGQKLLALLRQVELLEEEWLGD--EQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 TE G+ +R + + D S L +A+ A W+ P L LA Sbjct: 69 TEAGEAFHQRMRGALNVLQAIEQDTTAAAASVRGTLRIALPATFGRMWIAPILPAFLAAY 128 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 P L ++ E R + + A+ I + +L + +S + + Sbjct: 129 P-DLVVETAFEDRYVDLVAE-SFDVAIRIGTLTDSRLVARRLAPSRRMLCASPAYLQARG 186 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNF-DLPPGSVPCHIVNSSEAFVQLARQGTT 236 + L + + F L L+ + + +++ VQ A G Sbjct: 187 -MPSRPADLGQHACLGFSRLASHPLWHLRDGDKTAAIRITGPLVTDDAQSLVQAAVSGVG 245 Query: 237 CCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 M+ EL SG L+ + P + P +R++ T A D+ L Sbjct: 246 IAMVSDWLAGPELCSGRLVPVLPAHPVENSETIYLVHPSARLVPAKTRAFGDWIASEL 303 >UniRef50_A1KBM8 Glycine cleavage system transcriptional activator n=3 Tax=Betaproteobacteria RepID=A1KBM8_AZOSB Length = 322 Score = 236 bits (603), Expect = 9e-61, Method: Composition-based stats. Identities = 56/313 (17%), Positives = 97/313 (30%), Gaps = 19/313 (6%) Query: 2 KRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVP-PRPT 60 + P L+A +A R F+RAA++L +T +A+S +I+ LE + G L R T Sbjct: 4 RLPPLTALRAFEAAARHLSFKRAAEELAVTPTAISHQIRGLEEVLGVALFRRLPRALELT 63 Query: 61 EQGQKLLALLRQVELLEEEWLGDEQ--TGSTPLLLSLAVNADSLATWLLPALAPVLADSP 118 G+ + + + + + + + + WL+P L A P Sbjct: 64 AAGEAMRPKIAEGLDCFVAAVERVREVGRHAAGRVDVVAPPSFASRWLVPRLHRFYAAWP 123 Query: 119 -IRLNLQVEDETRTQERLRRG--------EVVGAVSIQHQALPSCLVDKLGALDYLFVSS 169 + L+L R G + P + L Y V S Sbjct: 124 GVELHLASALGAIDGASEREGGGQEMRGRRQQLWIRFGAGRYPGFRSELLLRPVYTPVCS 183 Query: 170 KPFAEKYFPNGVTRSALLKAPVVAFD-----HLDDMHQAFLQQNFDLPPGSVPCHIVNSS 224 + P + L ++ D H +L +P Sbjct: 184 PRLLQAKLPLRQ-PADLRYHHLIHDDTIGEGHQRATWADWLAAAGVPDADRIPGLHFADP 242 Query: 225 EAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTD 284 + A G ++P + ELA G L R+ Y+ P + Sbjct: 243 GLAIAAAADGLGVALVPKPMVTAELADGRLAAPFEQGLVARLAYY-LVMPPALAETPAVA 301 Query: 285 ALLDYGHKVLRQD 297 A D+ + D Sbjct: 302 AFRDWLLQEAGTD 314 >UniRef50_A0B3W0 Transcriptional regulator, LysR family n=12 Tax=Burkholderia RepID=A0B3W0_BURCH Length = 359 Score = 235 bits (602), Expect = 9e-61, Method: Composition-based stats. Identities = 49/296 (16%), Positives = 95/296 (32%), Gaps = 10/296 (3%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQGQ 64 Y + AV+ E F RAA +L + +S+VS+ +++LE+ L RT T +G+ Sbjct: 48 YAGVVTFLAVVTEGSFARAADRLGVGRSSVSRHVQRLEDRLDARLFQRTTRSMSLTREGE 107 Query: 65 KLLALLRQVELLEEEWLG---DEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRL 121 R + L + ++G L + + P L A P + Sbjct: 108 LFYENCRPGIEHLAQALEDMRELRSGPPSGHLRVGSTPGFGRKVIAPLLRDFHAQYP-DI 166 Query: 122 NLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGV 181 L + R + + A + + +L + + +S +A ++ Sbjct: 167 TLDLLLNDRPAD-FSADRIDVAFRDGRMEDSAIVARRLIPMQMIVCASPSYAHRHG-LPR 224 Query: 182 TRSALLKAPVVA--FDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCM 239 L + + F H N + V+ A G Sbjct: 225 HVDELARHRCINLCTASGRVTEWEFRIDGVTQQRQLAAHHTFNDIDLVVRAALDGLGIAQ 284 Query: 240 IPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLR 295 +P Q+ LA G L+ ++ + + + +DY + R Sbjct: 285 LPAYQVCDLLADGRLVSCLGQHAPDDGGHYLCY-LSRKHLPTRIRVFIDYMIEQTR 339 >UniRef50_B4SNX8 Transcriptional regulator, LysR family n=12 Tax=Proteobacteria RepID=B4SNX8_STRM5 Length = 301 Score = 235 bits (602), Expect = 9e-61, Method: Composition-based stats. Identities = 103/298 (34%), Positives = 157/298 (52%), Gaps = 4/298 (1%) Query: 3 RPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQ 62 R D+ L+AL AVIRE F+RAAQ L +T SA+SQR+K LE+ G+ L+ R P T + Sbjct: 2 RIDHAQLRALAAVIREGSFDRAAQSLNVTPSAISQRVKALEDRVGRLLVKRGTPATATAE 61 Query: 63 GQKLLALLRQVELLEEEWLGDEQTGS---TPLLLSLAVNADSLATWLLPALAPVLADSPI 119 GQ L+ L Q LLE + L + +AVN DSL TW A + Sbjct: 62 GQVLVQLAEQTALLEHDALHRMGLADEDLPQASIPVAVNHDSLETWFPQAAFQFAQSTGT 121 Query: 120 RLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPN 179 L+L+VED+ T E LR+G V+GAV+ + + C + LG++ Y + F E++F Sbjct: 122 TLDLRVEDQDHTVELLRQGTVLGAVTTLDEPVQGCQIHALGSIRYAATCTPEFRERHFAK 181 Query: 180 GVTRSALLKAPVVAFDHLDDMHQAFLQQ-NFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 GVT AL APV+ F+ D+M F ++ D P + P + S+ AFVQ G Sbjct: 182 GVTAQALATAPVLVFNRKDEMQSRFARRMAGDDLPSTAPTWWIPSTRAFVQANLGGMGWT 241 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 M P +++ L +G L+ + ++ LYW + + + M +T A+L+ ++R+ Sbjct: 242 MNPLPLVKRHLDAGRLVYVRQRAWEDVPLYWQHWKGDVQTMALLTRAVLEASSALVRR 299 >UniRef50_B9JB94 Transcriptional regulator protein n=3 Tax=Proteobacteria RepID=B9JB94_AGRRK Length = 307 Score = 235 bits (602), Expect = 9e-61, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 96/299 (32%), Gaps = 11/299 (3%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPP-RP 59 M R L A F A + L ++ SAV + + LE G L+ R+ R Sbjct: 1 MDR--LSGLNAFVRSADLGSFAAAGRVLGLSASAVGKAVTNLERQLGVRLMQRSTRSIRL 58 Query: 60 TEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLA-TWLLPALAPVLADSP 118 TE+G+ R+V E+ L V+ ++ +LLP L + P Sbjct: 59 TEEGRLFHERCRRVLDDLEDAQASLAQAVAVPRGRLRVSVPIVSYHFLLPVLPEFVVRYP 118 Query: 119 IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFP 178 + L ++ R + + G V A+ + L L ++ + E++ Sbjct: 119 -EVELDIDFNDRIVDMIEEG-VDVAIRSGDLPDSRLMSRTLRPFQMLLCAAPAYLERHGV 176 Query: 179 NGVTRSALLKAPVVAF---DHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGT 235 AL + F + + + N+ EA G Sbjct: 177 PD-CPRALDDHLAIRFRFPNSGKLQNWPLTLPDGGPELHMKTALSCNNMEALRGAVISGL 235 Query: 236 TCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVL 294 +P LA G+L + + + P +R + +D+ + L Sbjct: 236 GIGCMPDFLARSPLAEGKLRTVLDDHIDGPGHFHLLW-PSNRHLSPKVRVFVDFLSERL 293 >UniRef50_B0KGK4 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=B0KGK4_PSEPG Length = 315 Score = 235 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 97/298 (32%), Gaps = 10/298 (3%) Query: 6 YRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPR-PTEQGQ 64 +L R F RAA +LC+T SAVS RI +LE+ L R +E G+ Sbjct: 16 LGSLHVFLVAARHLSFSRAADELCLTASAVSHRINRLEDELALKLFHRMPRKVSLSEDGE 75 Query: 65 KLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQ 124 +L A++++ E + L+L V WL+P LA P + L Sbjct: 76 RLFAVMQRTMDELSEAVQARAHAEIAGQLTLYVRPSVAQCWLVPRLAQFTTRYP-DIQLD 134 Query: 125 VEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRS 184 + + + R ++ + P L V S +A+ + + Sbjct: 135 IRVGNESIDY-RTRKIDLVLCYSDGHHPGLQSIHLMNERIAPVCSPHYAQTH-ALANDLN 192 Query: 185 ALLKAPVVAF------DHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCC 238 L + + D Q + + S+ A T Sbjct: 193 RLDQCTTLHDVAAWDNAAFDAEWQLWASTTGARISLPRRFLTFDCSDLCTLAALNHTGVA 252 Query: 239 MIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 + + +A GEL+ G ++ P M K L+D+ + + Sbjct: 253 IGREQLVRTRIAQGELVLPFGGFVDTPNYGYYLVYPHHDPMPKRLQVLIDWLVECAQS 310 >UniRef50_Q02H78 Chromosome initiation inhibitor n=28 Tax=Gammaproteobacteria RepID=ICIA_PSEAB Length = 300 Score = 235 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 115/299 (38%), Positives = 162/299 (54%), Gaps = 5/299 (1%) Query: 1 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT 60 M DY+ L AL AV+ + GFERAAQ L ++QSAVSQRIK LE GQP+LVR PP PT Sbjct: 1 MILFDYKLLAALAAVVEQGGFERAAQALGLSQSAVSQRIKLLEARVGQPVLVRETPPHPT 60 Query: 61 EQGQKLLALLRQVELLEEEWLG---DEQTGSTPLLLSLAVNADSLATWLLPALAPVLADS 117 + G++LL ++QV LLE + + G P L +A+NADSLATW A+ A+ Sbjct: 61 DLGRRLLNHVQQVRLLEGDLQRWVPNLDEGGAPERLRIALNADSLATWWAAAVGDFCAER 120 Query: 118 PIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYF 177 + L+L VED+ +R+R GEV G V + + LGA+ Y ++S F ++F Sbjct: 121 RVLLDLVVEDQEVGLKRMRAGEVAGCVCGSARPVAGARSLLLGAMRYRGLASPDFIARHF 180 Query: 178 PNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTC 237 P GV +AL P + F D + FL+ H+ SSE FV+L G Sbjct: 181 PRGVEAAALAGVPAIVFGPDDLLQHRFLKDLGVEGGFIH--HLCPSSEGFVRLTAGGLGW 238 Query: 238 CMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQ 296 ++P Q++ ELA GEL++L PG LYWH + ++ +T+ LL L + Sbjct: 239 GLVPERQVQGELARGELVELLPGQVIDVPLYWHYWRNGGELLASLTEHLLARAGDGLVR 297 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.197 0.632 Lambda K H 0.267 0.0603 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,358,553,303 Number of Sequences: 3077464 Number of extensions: 147426487 Number of successful extensions: 526994 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 16259 Number of HSP's successfully gapped in prelim test: 2542 Number of HSP's that attempted gapping in prelim test: 468779 Number of HSP's gapped (non-prelim): 20765 length of query: 297 length of database: 1,040,396,356 effective HSP length: 128 effective length of query: 169 effective length of database: 646,480,964 effective search space: 109255282916 effective search space used: 109255282916 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.9 bits) S2: 94 (40.3 bits)